BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780928|ref|YP_003065341.1| histidyl-tRNA synthetase
[Candidatus Liberibacter asiaticus str. psy62]
         (496 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254780928|ref|YP_003065341.1| histidyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040605|gb|ACT57401.1| histidyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 496

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 496/496 (100%), Positives = 496/496 (100%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL
Sbjct: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH
Sbjct: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE
Sbjct: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM
Sbjct: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE
Sbjct: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV
Sbjct: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ
Sbjct: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE
Sbjct: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480

Query: 481 LVSTVKKILQENKEEI 496
           LVSTVKKILQENKEEI
Sbjct: 481 LVSTVKKILQENKEEI 496


>gi|315122645|ref|YP_004063134.1| histidyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496047|gb|ADR52646.1| histidyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 495

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 420/496 (84%), Positives = 457/496 (92%), Gaps = 1/496 (0%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           MGKKTK+RAELPRGFADCPT+EIRIRN+ILD+IR+IYE YGFDPIETPLLEYSD+LGKFL
Sbjct: 1   MGKKTKIRAELPRGFADCPTEEIRIRNKILDAIRDIYERYGFDPIETPLLEYSDALGKFL 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           PDEDRPN+GVFSLQDDD QWISLRYDLTAPLAR+VAE+ DTIVFP RTYRIGPVFRNEKH
Sbjct: 61  PDEDRPNQGVFSLQDDDSQWISLRYDLTAPLARHVAEHCDTIVFPYRTYRIGPVFRNEKH 120

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           GPGRFRQFIQCDVDNVGSS ETADAEMCMMMADTLE  GIKRNDY +GINNRKILDGILE
Sbjct: 121 GPGRFRQFIQCDVDNVGSSKETADAEMCMMMADTLEYAGIKRNDYQVGINNRKILDGILE 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           KIGL+GDDKLNERLIVLRAIDKLDKFG++GVKLLLGEGRTD+SGDFTKGANLT E+ID +
Sbjct: 181 KIGLNGDDKLNERLIVLRAIDKLDKFGMEGVKLLLGEGRTDDSGDFTKGANLTPEKIDTV 240

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +SFLSID EKSM+ELYELVKG+ +GE GF EL+ ISELV KSGY+SNRIKISSTIVRGLE
Sbjct: 241 MSFLSIDCEKSMNELYELVKGSTSGETGFRELIAISELVSKSGYDSNRIKISSTIVRGLE 300

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTGCVYEAIL FPV N+K++ V+FGSVGGGGRYDGLVSRFKGQN+PATGFSIGISRLIV
Sbjct: 301 YYTGCVYEAILRFPVKNKKKQTVIFGSVGGGGRYDGLVSRFKGQNIPATGFSIGISRLIV 360

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALKSLE  +    E GPVL+T MDHD DSL++YQMYTQMLR  GIR EMF GSSKNFGNQ
Sbjct: 361 ALKSLE-DSAKNIEKGPVLVTVMDHDIDSLNRYQMYTQMLRAEGIRTEMFQGSSKNFGNQ 419

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRRNCPLAIIQG GERS+GMLQIKDL KGK+LS EIKNNE+WREARV Q  IPISE
Sbjct: 420 LKYADRRNCPLAIIQGEGERSKGMLQIKDLFKGKKLSHEIKNNETWREARVGQTMIPISE 479

Query: 481 LVSTVKKILQENKEEI 496
           LV+TVKK+LQEN EE+
Sbjct: 480 LVATVKKMLQENMEEV 495


>gi|327191139|gb|EGE58183.1| histidyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 507

 Score =  388 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 320/495 (64%), Positives = 375/495 (75%), Gaps = 2/495 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +IR  N +   IR +YE+YGFDP+ETPL EY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGFVDRAAGDIRAVNEMTAKIREVYEHYGFDPVETPLFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAEMCMMMADTLEA+GIKR DY I +NNRK+LDG+LE 
Sbjct: 126 PGRFRQFMQFDADTVGAPGVQADAEMCMMMADTLEALGIKRGDYVIRVNNRKVLDGVLEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL GDDK  +RL VLRAIDKLDKFG +GV LLLG GR D SGDFTKGA L   QID ++
Sbjct: 186 IGLGGDDKAGQRLNVLRAIDKLDKFGSEGVALLLGPGRKDESGDFTKGAGLDQAQIDKVL 245

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D  +S   L ELV GT  G +G  EL  I  LV  +GY S+RIKI  ++VRGLE
Sbjct: 246 FFVGIKDYAESAARLAELVAGTSKGGEGVEELNFIGALVASAGYQSDRIKIDPSVVRGLE 305

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYEA L F V NEK + VVFGSV GGGRYDGLVSRF GQ VPATGFSIG+SRL+ 
Sbjct: 306 YYTGPVYEAELLFDVTNEKGEKVVFGSVAGGGRYDGLVSRFMGQPVPATGFSIGVSRLMT 365

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L     + + + PVL+T MD D +++ +YQ  TQ LR AGIRAEMF G+ K FGNQ
Sbjct: 366 ALKNLGKLGAS-EVIEPVLVTVMDGDVEAMGRYQKMTQALRAAGIRAEMFQGNWKKFGNQ 424

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRR CP+AIIQG  ER+ G++QIKDL +GK LS EI++N SWREARVAQ T+P ++
Sbjct: 425 LKYADRRGCPVAIIQGGDERATGVVQIKDLIEGKRLSGEIEDNASWREARVAQETVPEAD 484

Query: 481 LVSTVKKILQENKEE 495
           LV+ VK+IL    E+
Sbjct: 485 LVAKVKEILAAQAED 499


>gi|222084995|ref|YP_002543524.1| histidyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|254782303|sp|B9J9Y1|SYH_AGRRK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|221722443|gb|ACM25599.1| histidyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 504

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 318/495 (64%), Positives = 378/495 (76%), Gaps = 2/495 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +IR  N +   IR +YE+YGFDP+ETPLLEY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGFVDRSASDIRAVNEMTAKIRAVYEHYGFDPMETPLLEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D +G+    ADAEMCMMMADTLEA+GIKR DY I +NNRK+LDG+LE 
Sbjct: 126 PGRFRQFMQFDADTIGAPGVQADAEMCMMMADTLEALGIKRGDYLIRVNNRKVLDGVLEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL GDDK  +RL VLRAIDKLDKFG +GV LLLG GR D SGDFTKGA L +EQID ++
Sbjct: 186 IGLGGDDKAGQRLNVLRAIDKLDKFGPEGVALLLGPGRKDESGDFTKGAGLNAEQIDKVL 245

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D  +S  +L ELV GT  G +G  EL  I  LV  +GY S+RIKI  ++VRGLE
Sbjct: 246 FFVGIKDYAESAAQLAELVAGTSKGGEGVEELNFIGSLVTSAGYQSDRIKIDPSVVRGLE 305

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYEA L F V NEK + VVFGSV GGGRYDGLVSRF GQ VPATGF+IG+SRL+ 
Sbjct: 306 YYTGPVYEAELTFDVTNEKGEKVVFGSVAGGGRYDGLVSRFMGQPVPATGFAIGVSRLMT 365

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L       + + PVL+T MD D +++ +YQ +TQ LR AGIRAEMF G+ K FGNQ
Sbjct: 366 ALKNLGK-LGQDEVIAPVLVTVMDGDVEAMGRYQRFTQQLRAAGIRAEMFQGNWKKFGNQ 424

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRR CP+AIIQG  ER+ G++Q+KDL +GK LS EI++N SWREARVAQ T+P ++
Sbjct: 425 LKYADRRGCPIAIIQGGDERAEGVVQLKDLIEGKRLSGEIEDNASWREARVAQETVPEAD 484

Query: 481 LVSTVKKILQENKEE 495
           LV+ V+ IL    E+
Sbjct: 485 LVAKVQAILAAQAED 499


>gi|15888019|ref|NP_353700.1| histidyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|32130126|sp|Q8UHK4|SYH_AGRT5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|15155635|gb|AAK86485.1| histidyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 507

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 315/496 (63%), Positives = 379/496 (76%), Gaps = 2/496 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +I   N ++D IR +YE YGFDPIETPL EY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGFVDRSAADIHATNEMVDKIRRVYELYGFDPIETPLFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLQDDDDQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG++   ADAEMCMMMADT+EA+GI R DY I +NNRK+LDG++E 
Sbjct: 126 PGRFRQFMQFDADTVGAAGVQADAEMCMMMADTMEALGIARGDYVIRVNNRKVLDGVMEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL G+D    RL VLRAIDKLDKFG +GVKLLLG GR D SGDFTKGA L  EQI+ ++
Sbjct: 186 IGLGGEDNAGRRLNVLRAIDKLDKFGPEGVKLLLGPGRKDESGDFTKGAGLGDEQIEKVL 245

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D   S  +L +LV GT  GE+G +EL  I  LV  +GY++ RIKI  ++VRGLE
Sbjct: 246 FFVGIKDYAASADDLAKLVAGTSKGEEGVDELNTIGALVSGAGYDATRIKIDPSVVRGLE 305

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYEA L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ 
Sbjct: 306 YYTGPVYEAELTFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMT 365

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L      +K + PVLIT MD D +S+ +YQ +TQ LR  GIRAEM+ G+ K FGNQ
Sbjct: 366 ALKNLGK-LGQVKPLAPVLITVMDGDVESMGRYQRFTQALRAEGIRAEMYQGNWKKFGNQ 424

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADR   P+AIIQG  ER+ G++QIKDL +GK LS EI++N SWREARVAQ+++P +E
Sbjct: 425 LKYADRLGSPIAIIQGGDERAEGVVQIKDLIEGKRLSGEIEDNASWREARVAQVSVPEAE 484

Query: 481 LVSTVKKILQENKEEI 496
           LV+ V++IL+   E++
Sbjct: 485 LVAKVREILEHQAEDV 500


>gi|86356467|ref|YP_468359.1| histidyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86280569|gb|ABC89632.1| histidyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 552

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 318/495 (64%), Positives = 376/495 (75%), Gaps = 2/495 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +IR  N +   IR +YE+YGFDP+ETPL EY+D+LGKFLP
Sbjct: 51  KKPQKLKARLPRGFVDRAAGDIRAVNEMTAKIREVYEHYGFDPVETPLFEYTDALGKFLP 110

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 111 DSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAENFNEIHLPYRTYRAGYVFRNEKPG 170

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAEMCMMMADTLEA+GIKR DY I +NNRK+LDG+LE 
Sbjct: 171 PGRFRQFMQFDADTVGAPGVQADAEMCMMMADTLEALGIKRGDYVIRVNNRKVLDGVLEA 230

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL GDDK  +RL VLRAIDKLDKFG +GV LLLG GR D SGDFTKGA L  EQID ++
Sbjct: 231 IGLGGDDKAGQRLNVLRAIDKLDKFGPEGVALLLGPGRKDESGDFTKGAGLNQEQIDKVL 290

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D  +S   L ELV G   G +G  EL  I  LV  +GY S+RIKI  ++VRGLE
Sbjct: 291 FFVGIKDYAESAGRLAELVAGASKGAEGVEELNFIGALVASAGYGSDRIKIDPSVVRGLE 350

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYEA L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ 
Sbjct: 351 YYTGPVYEAELLFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMT 410

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L     + + + PVL+T MD D +++ +YQ  TQ LR AGIRAEMF G+ K FGNQ
Sbjct: 411 ALKNLGKLGAS-EVIEPVLVTVMDGDVEAMGRYQKMTQDLRAAGIRAEMFQGNWKKFGNQ 469

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRR CP+AIIQG  ER+ G++QIKDL +GK L+ EI++N SWREARVAQ T+P ++
Sbjct: 470 LKYADRRGCPVAIIQGGDERAEGVVQIKDLIEGKRLAGEIEDNASWREARVAQETVPEAD 529

Query: 481 LVSTVKKILQENKEE 495
           LV+ V++IL  +  +
Sbjct: 530 LVAKVREILAAHAGD 544


>gi|241203257|ref|YP_002974353.1| histidyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857147|gb|ACS54814.1| histidyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 506

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 319/495 (64%), Positives = 377/495 (76%), Gaps = 2/495 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +IR  N +   IR +YE+YGFDP+ETPL EY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGFVDRTAGDIRAVNEMTAKIREVYEHYGFDPLETPLFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAEMCMMMADTLEA+GIKR DY I +NNRK+LDG+LE 
Sbjct: 126 PGRFRQFMQFDADTVGAPGVQADAEMCMMMADTLEALGIKRGDYLIRVNNRKVLDGVLEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL GDDK  +RL VLRAIDKLDKFG +GV LLLG GR D SGDFTKGA L  EQID ++
Sbjct: 186 IGLGGDDKAGQRLNVLRAIDKLDKFGPEGVALLLGPGRKDESGDFTKGAGLDKEQIDKVL 245

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D  +S+  L ELV GT  G +G +EL  I  LV  +GY  +RIKI  ++VRGLE
Sbjct: 246 FFVGITDYAESVARLAELVAGTARGGEGVDELNFIGALVTSAGYGPDRIKIDPSVVRGLE 305

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYEA L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ 
Sbjct: 306 YYTGPVYEAELTFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMT 365

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L     + + + PVL+T MD D +++ +YQ  TQ LR AGIRAEMF G+ K FGNQ
Sbjct: 366 ALKNLGKLGAS-EVIEPVLVTVMDGDVEAMGRYQKMTQELRAAGIRAEMFQGNWKKFGNQ 424

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRR CP+AIIQG  ER+  ++QIKDL +GK LS EI++N SWREARVAQ T+P ++
Sbjct: 425 LKYADRRGCPVAIIQGGDERATSVVQIKDLIEGKRLSGEIEDNASWREARVAQETVPEAD 484

Query: 481 LVSTVKKILQENKEE 495
           LV+ V++IL    E+
Sbjct: 485 LVAKVREILAAQAED 499


>gi|190890528|ref|YP_001977070.1| histidyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190695807|gb|ACE89892.1| histidyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 545

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 319/495 (64%), Positives = 374/495 (75%), Gaps = 2/495 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +IR  N +   IR +YE+YGFDP+ETPL EY+D+LGKFLP
Sbjct: 44  KKPQKLKARLPRGFVDRAAGDIRAVNEMTAKIREVYEHYGFDPVETPLFEYTDALGKFLP 103

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 104 DSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 163

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAEMCMMMADTLEA+GIKR DY I +NNRK+LDG+LE 
Sbjct: 164 PGRFRQFMQFDADTVGAPGVQADAEMCMMMADTLEALGIKRGDYVIRVNNRKVLDGVLEA 223

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL GDDK  +RL VLRAIDKLDKFG +GV LLLG GR D SGDFTKGA L   QID ++
Sbjct: 224 IGLGGDDKAGQRLNVLRAIDKLDKFGPEGVALLLGPGRKDESGDFTKGAGLDQAQIDKVL 283

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D  +S  +L ELV GT  G +G  EL  I  LV  +GY S+RIKI  ++VRGLE
Sbjct: 284 FFVGIADYAESAGQLAELVAGTSKGGEGVEELNFIGALVASAGYQSDRIKIDPSVVRGLE 343

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYEA L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ 
Sbjct: 344 YYTGPVYEAELSFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMT 403

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L     +      VL+T MD D +++ +YQ  TQ LR AGIRAEMF G+ K FGNQ
Sbjct: 404 ALKNLGKLGASEVTEP-VLVTVMDGDVEAMGRYQKMTQALRAAGIRAEMFQGNWKKFGNQ 462

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRR CP+AIIQG  ER+ G++QIKDL +GK LS EI++N SWREARVAQ T+P ++
Sbjct: 463 LKYADRRGCPVAIIQGGDERATGVVQIKDLIEGKRLSGEIEDNASWREARVAQETVPEAD 522

Query: 481 LVSTVKKILQENKEE 495
           LV+ V++IL    E+
Sbjct: 523 LVAKVREILAVQAED 537


>gi|118590656|ref|ZP_01548057.1| histidyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118436632|gb|EAV43272.1| histidyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 488

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 290/496 (58%), Positives = 356/496 (71%), Gaps = 16/496 (3%)

Query: 1   MGKK-TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M KK  KL+A LPRGF D   ++IR  + +L  IR +YE YGFDP+ETP  EY+D LGKF
Sbjct: 1   MAKKPNKLKARLPRGFVDRSAEDIRATDEMLAKIRAVYERYGFDPVETPAFEYTDCLGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN GVFS+QD+D QW+SLRYDLTAPLAR+V+EN + I  P RTYR G VFRNEK
Sbjct: 61  LPDTDRPNAGVFSVQDEDEQWMSLRYDLTAPLARHVSENINEIQLPYRTYRAGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+    ADAEMCMMM+DT+EA+GI R  Y I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPGVQADAEMCMMMSDTMEALGIPRGQYVIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E IGL G++    RL VLRAIDKLDKFG +GV+LLLGEGR D SGDFTKGA L  E ID 
Sbjct: 181 ESIGLGGEEHEERRLTVLRAIDKLDKFGTEGVRLLLGEGRKDESGDFTKGAELAPEGIDS 240

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +++F+S                     +G  EL  ++E+    GY  +RIKI  ++VRGL
Sbjct: 241 IIAFVSGTGT--------------LDNEGITELNTMAEIFSACGYGEDRIKIDPSVVRGL 286

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           EYYTG V+EA L F V NEK   V FGSVGGGGRYDGLV RF G++VPATGFSIG+SRL+
Sbjct: 287 EYYTGTVFEAELLFDVTNEKGDVVQFGSVGGGGRYDGLVKRFTGRDVPATGFSIGVSRLM 346

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            ALK+L     +   + PVL+T MD D  +L +YQ   Q LR AGIRAEM+ G+ K FGN
Sbjct: 347 TALKNLGKLGTSDV-VAPVLVTVMDGDVAALGRYQKMVQDLREAGIRAEMYQGNWKKFGN 405

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           QLKYADRRNCP+AIIQG+ ER  G +Q+KDL +GK LS EI +N +WRE+R AQ+T+  +
Sbjct: 406 QLKYADRRNCPIAIIQGSDEREAGEIQVKDLIEGKRLSEEITDNITWRESRPAQVTVKET 465

Query: 480 ELVSTVKKILQENKEE 495
           +L++TV+ IL    E+
Sbjct: 466 DLIATVRGILDGQAED 481


>gi|15964539|ref|NP_384892.1| histidyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307308487|ref|ZP_07588191.1| histidyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307322410|ref|ZP_07601767.1| histidyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|32130135|sp|Q92RR7|SYH_RHIME RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|15073716|emb|CAC45358.1| Probable histidyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306891945|gb|EFN22774.1| histidyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306901090|gb|EFN31698.1| histidyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 504

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 310/495 (62%), Positives = 374/495 (75%), Gaps = 2/495 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRGF D    +IR  + ++  IR +YE YGFDP+ETPL EY+D+LGKFLP
Sbjct: 6   KKTQKLRARLPRGFVDRSAADIRAVDEMIAKIREVYERYGFDPVETPLFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSL DDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLTDDDDQWLSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG++   ADAEMCMMMADT+EA+GI R DY I +NNRK+LDG+LE 
Sbjct: 126 PGRFRQFMQFDADTVGAAGVQADAEMCMMMADTMEALGIARGDYVIRVNNRKVLDGVLEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL G ++ N RL VLRAIDKLDKFG +GV+LLLGEGR D SGDFTKGA L  EQI  ++
Sbjct: 186 IGLGGVEQTNTRLTVLRAIDKLDKFGPEGVRLLLGEGRKDESGDFTKGAGLNEEQIGKIL 245

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D  +S  EL  LV GT  G +G NEL  I  LV  +GY ++RIKI  ++VRGLE
Sbjct: 246 FFVGITDYARSADELAALVAGTARGAEGVNELNTIRGLVLSAGYEADRIKIDPSVVRGLE 305

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ 
Sbjct: 306 YYTGPVFEAELQFAVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMT 365

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L           PV++  MD D +S+ +YQ + Q LR AGIRAEM+ G+ KNFG+Q
Sbjct: 366 ALKNLGKLGAEQVT-APVVVCVMDRDIESMGRYQRFVQDLRHAGIRAEMYQGNKKNFGDQ 424

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRR  P+A+IQG  ER+ G++QIKDL +GK LS EI++N +WREARVAQ+++P  E
Sbjct: 425 LKYADRRGSPIAVIQGGDERASGVVQIKDLIEGKRLSGEIEDNVAWREARVAQVSVPEGE 484

Query: 481 LVSTVKKILQENKEE 495
           LV+ V++IL E  E+
Sbjct: 485 LVAKVRQILAEQAED 499


>gi|328545083|ref|YP_004305192.1| Histidyl-tRNA synthetase protein [polymorphum gilvum SL003B-26A1]
 gi|326414825|gb|ADZ71888.1| Histidyl-tRNA synthetase protein [Polymorphum gilvum SL003B-26A1]
          Length = 516

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 292/507 (57%), Positives = 363/507 (71%), Gaps = 13/507 (2%)

Query: 1   MG--KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M   K  KL+A LPRGF D    +IR    ++  IR +YE YGFDP+ETP+ EY+D LGK
Sbjct: 4   MANPKTQKLKARLPRGFVDRSASDIRATEEMVARIRAVYELYGFDPVETPMFEYTDCLGK 63

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           FLPD DRPN GVFS+QDDD QW+SLRYDLTAPLAR+VAE+ + I  P R+YR G VFRNE
Sbjct: 64  FLPDTDRPNAGVFSVQDDDEQWMSLRYDLTAPLARHVAEHINDIQLPFRSYRAGWVFRNE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           K GPGRFRQF+Q D D VG+    ADAEMCMMMADT+EA+GI+R DY I +NNRK+LDG+
Sbjct: 124 KPGPGRFRQFMQFDADTVGAPGVQADAEMCMMMADTMEALGIQRGDYLIRVNNRKVLDGV 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           LE IGL GDD    RL VLRA+DK DKFG +GV+LLLGEGR D SGDFTKGA L+   I+
Sbjct: 184 LEAIGLAGDDNGERRLTVLRAMDKHDKFGSEGVRLLLGEGRKDESGDFTKGAGLSETAIE 243

Query: 239 IMVSFLSIDLEKSMHEL----------YELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
            ++  L       + +                     ++GF EL +IS+LV+ SGY S+R
Sbjct: 244 AILEILDASAIDDLIDYSNDFTFKTAALSKFAINQHFQEGFAELKLISDLVKASGYMSDR 303

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           I I  ++VRGLEYYTG VYEA L F V NEK + V FGSVGGGGRYDGLV RF G++VPA
Sbjct: 304 ISIDPSVVRGLEYYTGPVYEAELLFDVTNEKGEVVQFGSVGGGGRYDGLVKRFTGRDVPA 363

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           TGFSIG+SRL+ ALK+L       + + PVL+T MD D ++L++YQ  TQ LR AGIRAE
Sbjct: 364 TGFSIGVSRLMTALKNLGKLGQE-EVLEPVLVTVMDGDGEALARYQQMTQTLRAAGIRAE 422

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M+ G+ K FGNQLKYAD+R CPLAIIQG+ ER+ G +QIKDL +GK L+ EI +N +WRE
Sbjct: 423 MYQGNWKKFGNQLKYADKRGCPLAIIQGSDERAAGEVQIKDLIEGKRLAGEIADNVTWRE 482

Query: 469 ARVAQITIPISELVSTVKKILQENKEE 495
           +R AQ+T+  ++LV  V ++L+   E+
Sbjct: 483 SRPAQVTVAEADLVDAVGRLLESQAED 509


>gi|325292059|ref|YP_004277923.1| Histidyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325059912|gb|ADY63603.1| Histidyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 507

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 316/496 (63%), Positives = 379/496 (76%), Gaps = 2/496 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +I   N ++D IR +YE YGFDP+ETPL EY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGFVDRSAADIHATNEMIDKIRKVYELYGFDPVETPLFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLQDDDDQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG++   ADAEMCMMMADTLEA+GI R DY I +NNRK+LDG++E 
Sbjct: 126 PGRFRQFMQFDADTVGAAGVQADAEMCMMMADTLEALGIARGDYVIRVNNRKVLDGVMEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL G++    RL VLRAIDKLDKFG  GVKLLLG GR D SGDFTKGA L  EQI+ ++
Sbjct: 186 IGLGGEENAGRRLNVLRAIDKLDKFGPDGVKLLLGPGRKDESGDFTKGAGLGEEQIEKVL 245

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D  +S  +L +LV GT  G +G +EL +I  LV  +GY++ RIKI  ++VRGLE
Sbjct: 246 FFVGIKDYAESADDLAKLVAGTSKGAEGVDELNIIGSLVSGAGYDATRIKIDPSVVRGLE 305

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYEA L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ 
Sbjct: 306 YYTGPVYEAELTFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMT 365

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L      +K + PVLIT MD D DS+ +YQ +TQ LR  GIRAEM+ G+ K FGNQ
Sbjct: 366 ALKNLGK-LGQVKPLAPVLITVMDGDVDSMGRYQRFTQALRAEGIRAEMYQGNWKKFGNQ 424

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADR   P+AIIQG  ER+ G++QIKDL +GK LS EI++N SWREARVAQIT P +E
Sbjct: 425 LKYADRLGSPIAIIQGGDERAEGVVQIKDLIEGKRLSGEIEDNASWREARVAQITAPETE 484

Query: 481 LVSTVKKILQENKEEI 496
           LV+ V++IL+ + E++
Sbjct: 485 LVAKVREILEHHAEDV 500


>gi|254473551|ref|ZP_05086947.1| histidyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211957263|gb|EEA92467.1| histidyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 506

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 270/489 (55%), Positives = 354/489 (72%), Gaps = 4/489 (0%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            LPRGF D    E+    +++  I+  YE YGF+P+ETP+ EY+D+LGKFLPD+DRPN G
Sbjct: 12  RLPRGFVDRGPAELLAMEQMISVIKQTYELYGFEPVETPMFEYTDALGKFLPDQDRPNAG 71

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           VFSLQDDD QW+SLRYDLTAPLAR+VAENF+++  P R+YR G VFRNEK GPGRFRQF+
Sbjct: 72  VFSLQDDDEQWMSLRYDLTAPLARHVAENFESLPKPYRSYRAGYVFRNEKPGPGRFRQFM 131

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q D D +G+ + +ADAE+CMM +DT+E +GI R DY I +NNRK+LDG++E IGL GD+ 
Sbjct: 132 QFDADTIGAPSVSADAEICMMASDTMERLGISRGDYVIRVNNRKVLDGVMEVIGLAGDEH 191

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
            + RL VLRA+DKLD+ G++GVK LLGEGR D+SGDFTKGA L   + + +++F+    E
Sbjct: 192 ADTRLTVLRAVDKLDRLGVEGVKALLGEGRKDDSGDFTKGAGLGDAEAEKVLAFVEAGGE 251

Query: 250 ---KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              +++  L  L+  +  G +G  EL  + +L   +GY   R+ I  ++VRGLEYYTG V
Sbjct: 252 TTDQTIENLRSLIADSKTGAEGVEELATMGKLFDAAGYTDGRVLIDPSVVRGLEYYTGPV 311

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           YEA L F V +EK +PV FGSVGGGGRYDGLVSRF  Q VP+TGFS+G+SRL+ AL +L 
Sbjct: 312 YEAELTFEVKDEKGRPVRFGSVGGGGRYDGLVSRFMSQPVPSTGFSVGVSRLMAALTTLG 371

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +      V++  MD D DS++ YQ   Q LRTAGIRAEM+ G+ K FG QL+YAD+
Sbjct: 372 KLGQDEIAGP-VVVCVMDKDIDSIAHYQAMVQDLRTAGIRAEMYQGNPKQFGKQLQYADK 430

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           RN P AIIQG+ ER  G +QIKDL +GK LS EI++N++WRE+R AQ  +   ELV+ VK
Sbjct: 431 RNSPCAIIQGSQEREEGEVQIKDLIEGKRLSAEIEDNKTWRESRPAQFAVKRDELVAEVK 490

Query: 487 KILQENKEE 495
           K+L   +E+
Sbjct: 491 KLLAAQEED 499


>gi|209548071|ref|YP_002279988.1| histidyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|229558723|sp|B5ZRD0|SYH_RHILW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|209533827|gb|ACI53762.1| histidyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 507

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 318/495 (64%), Positives = 375/495 (75%), Gaps = 2/495 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +IR  N +   IR +YE+YGFDP+ETP  EY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGFVDRTAGDIRAVNEMTAKIREVYEHYGFDPLETPQFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAEMCMMMADTLEA+GIKR DY + +NNRK+LDG+LE 
Sbjct: 126 PGRFRQFMQFDADTVGAPGVQADAEMCMMMADTLEALGIKRGDYVVRVNNRKVLDGVLEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL GDDK  +RL VLRAIDKLDKFG +GV LLLG GR D SGDFTKGA L   QID ++
Sbjct: 186 IGLGGDDKAGQRLNVLRAIDKLDKFGPEGVALLLGPGRKDESGDFTKGAGLDQAQIDKVL 245

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D  +S   L ELV GT  G +G  EL  I  LV  +GY ++RIKI  +IVRGLE
Sbjct: 246 FFVGIKDYAESASRLAELVAGTSKGAEGVEELNFIGTLVASAGYGADRIKIDPSIVRGLE 305

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYEA L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ 
Sbjct: 306 YYTGPVYEAELSFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMT 365

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L     + + + PVL+T MD D +++ +YQ  TQ LR AGIRAEMF G+ K FGNQ
Sbjct: 366 ALKNLGKLGAS-EVIEPVLVTVMDGDVEAMGRYQKMTQDLRAAGIRAEMFQGNWKKFGNQ 424

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRR CP+AIIQG  ER+ G++QIKDL +GK LS EI++N SWREARVAQ T+P ++
Sbjct: 425 LKYADRRGCPVAIIQGGDERATGVVQIKDLIEGKRLSGEIEDNASWREARVAQETVPEAD 484

Query: 481 LVSTVKKILQENKEE 495
           LV+ V++IL    E+
Sbjct: 485 LVAKVREILAAQAED 499


>gi|150395628|ref|YP_001326095.1| histidyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150027143|gb|ABR59260.1| histidyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 507

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 308/495 (62%), Positives = 373/495 (75%), Gaps = 2/495 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRGF D P  +IR  + ++  IR +YE YGFDP+ETPL EY+D+LGKFLP
Sbjct: 9   KKTQKLRARLPRGFVDRPAADIRAVDEMVSKIREVYERYGFDPVETPLFEYTDALGKFLP 68

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSL DDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 69  DSDRPNEGVFSLTDDDDQWLSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 128

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG++   ADAEMCMMMADT+EA+GI R DY I +NNRK+LDG+LE 
Sbjct: 129 PGRFRQFMQFDADTVGAAGVQADAEMCMMMADTMEALGIARGDYVIRVNNRKVLDGVLEA 188

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL G +++N RL VLRAIDKLDKFG +GV+LLLGEGR D SGDFTKGA L  EQI  ++
Sbjct: 189 IGLGGGEQMNTRLTVLRAIDKLDKFGPEGVRLLLGEGRKDESGDFTKGAGLDDEQIGKIL 248

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D  +S   L  LV GT  G +G NEL  I  LV  +GY ++RIKI  ++VRGLE
Sbjct: 249 FFVGITDYAESADALAALVAGTARGAEGVNELNTIRSLVLSAGYEADRIKIDPSVVRGLE 308

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ 
Sbjct: 309 YYTGPVFEAELQFAVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMT 368

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L           PV++  MD D +S+ +YQ + Q LR AGIRAEM+ G+ KNFG+Q
Sbjct: 369 ALKNLGKLGVEQVT-APVVVCVMDRDIESMGRYQRFVQDLRHAGIRAEMYQGNKKNFGDQ 427

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRR  P+A+IQG  ER+ G++QIKDL +GK LS EI++N +WREAR AQI++P  E
Sbjct: 428 LKYADRRGSPIAVIQGGDERASGVVQIKDLIEGKRLSGEIEDNVAWREARAAQISVPEGE 487

Query: 481 LVSTVKKILQENKEE 495
           LV  +++IL +  E+
Sbjct: 488 LVVKIREILADQAED 502


>gi|116250651|ref|YP_766489.1| histidyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123261896|sp|Q1MKY0|SYH_RHIL3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|115255299|emb|CAK06374.1| putative histidyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 523

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 319/495 (64%), Positives = 374/495 (75%), Gaps = 2/495 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +IR  N +   IR +YE+YGFDP+ETPL EY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGFVDRTAGDIRAVNEMTAKIREVYEHYGFDPLETPLFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAEMCMMMADTLEA+GIKR DY I +NNRK+LDG+LE 
Sbjct: 126 PGRFRQFMQFDADTVGAPGVQADAEMCMMMADTLEALGIKRGDYVIRVNNRKVLDGVLEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL GDDK  +RL VLRAIDKLDKFG +GV LLLG GR D SGDFTKGA L  EQID ++
Sbjct: 186 IGLGGDDKAGQRLNVLRAIDKLDKFGPEGVALLLGPGRKDESGDFTKGAGLDKEQIDKVL 245

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D  +S   L ELV GT  G +G  EL  I  LV  +GY  +RIKI  ++VRGLE
Sbjct: 246 FFVGITDYGESAVRLAELVAGTARGGEGVEELNFIGALVTSAGYGPDRIKIDPSVVRGLE 305

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYEA L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ 
Sbjct: 306 YYTGPVYEAELTFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMT 365

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L     + + + PVL+T MD D +++ +YQ  TQ LR AGIRAEMF G+ K FGNQ
Sbjct: 366 ALKNLGKLGAS-EVIEPVLVTVMDGDVEAMGRYQKMTQELRAAGIRAEMFQGNWKKFGNQ 424

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRR CP+AIIQG  ER+  ++QIKDL +GK LS EI++N SWREARVAQ T P ++
Sbjct: 425 LKYADRRGCPVAIIQGGDERATSVVQIKDLIEGKRLSGEIEDNASWREARVAQETAPEAD 484

Query: 481 LVSTVKKILQENKEE 495
           LV+ V++IL    E+
Sbjct: 485 LVAKVREILAAQAED 499


>gi|227820980|ref|YP_002824950.1| histidyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227339979|gb|ACP24197.1| histidyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 507

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 311/495 (62%), Positives = 372/495 (75%), Gaps = 2/495 (0%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +IR  + ++  IR +YE YGFDP+ETPL EY+D+LGKFLP
Sbjct: 9   KKPQKLKARLPRGFVDRSAADIRAVDEMIAKIREVYERYGFDPVETPLFEYTDALGKFLP 68

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSL DDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 69  DSDRPNEGVFSLTDDDEQWMSLRYDLTAPLARHVAENFNEIQLPHRTYRAGYVFRNEKPG 128

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG++   ADAEMCMMMADT+EA+GI R DY I +NNRK+LDG+LE 
Sbjct: 129 PGRFRQFMQFDADTVGAAGVQADAEMCMMMADTMEALGIARGDYVIRVNNRKVLDGVLEA 188

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL G D+ N RL VLRAIDKLDKFG +GV+LLLGEGR D SGDFTKGA L  EQI  ++
Sbjct: 189 IGLGGGDQANARLTVLRAIDKLDKFGPEGVRLLLGEGRKDESGDFTKGAGLNEEQIRKIL 248

Query: 242 SFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            F+ I D  KS  EL ELV GT  G +G  EL  I  LV  +GY ++RIKI  ++VRGLE
Sbjct: 249 FFVGISDYAKSAGELAELVAGTGKGTEGVEELNTIRSLVLSAGYEADRIKIDPSVVRGLE 308

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ 
Sbjct: 309 YYTGPVFEAELQFSVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMT 368

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+L            V+   MD D DS+ +YQ + Q LR AGIRAEM+ G+ KNFG+Q
Sbjct: 369 ALKNLGKLGVEEVVAPVVV-CVMDRDIDSMGRYQRFVQQLRHAGIRAEMYQGNKKNFGDQ 427

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LKYADRR  P+AIIQG  ER+ G++QIKDL +GK LS EI++N +WREARVAQ+++P  +
Sbjct: 428 LKYADRRGSPIAIIQGGDERASGIVQIKDLIEGKRLSGEIEDNVAWREARVAQVSVPEGD 487

Query: 481 LVSTVKKILQENKEE 495
           LV+ V++IL E  E+
Sbjct: 488 LVAKVREILAEQAED 502


>gi|154251054|ref|YP_001411878.1| histidyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154155004|gb|ABS62221.1| histidyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 506

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 254/503 (50%), Positives = 329/503 (65%), Gaps = 14/503 (2%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A +P+G  D     +R   R+L  IR +YE YGFDP+ET   EY+D+LG
Sbjct: 1   MNKSQKSFRPKARVPKGLRDMSAGMVRAEERMLARIREVYERYGFDPLETSAFEYADALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPDEDRPN+GVFS QDDD QW++LRYDLTAPLARYVAEN+D +  P R Y+ GPV+RN
Sbjct: 61  KFLPDEDRPNEGVFSFQDDDEQWLALRYDLTAPLARYVAENYDALPKPFRRYQTGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF Q D D V +    ADAEMCMM AD LEA+GI R  Y I  NNRK+LDG
Sbjct: 121 EKPGPGRFRQFTQFDADTVAAPGVAADAEMCMMGADCLEALGIPRGSYRIRANNRKVLDG 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +LE+IG+ G+      + VLRAIDK D+ G +GV+LLLG GR D SGDFTKGA L+  QI
Sbjct: 181 LLERIGIAGEPGSTTYMTVLRAIDKYDRLGRKGVELLLGPGRKDESGDFTKGAGLSPSQI 240

Query: 238 DIMVSFLS-------IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
             +V ++         D +  +     +V  +  G +G +EL  +  L   +GY  +RI+
Sbjct: 241 TAVVDYVESGVGEGASDRKLVLDGWRNVVGESAIGREGLDELAEMDALFTAAGYGLDRIE 300

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
            +S IVRGL YYTG V+E+ L F V +E   PV FGSVG GGRYDGLV RFKG  VPATG
Sbjct: 301 FNSWIVRGLGYYTGPVFESDLLFEVKDESGNPVRFGSVGSGGRYDGLVERFKGVKVPATG 360

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           FSIG+SRL  AL+ L        E     +  +  D+++++ YQ     LR AGIRAE++
Sbjct: 361 FSIGVSRLQAALELLGKLDV---EDVLAPVVVLTLDAENMAGYQSMVSELRAAGIRAELY 417

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG S     QLKYAD+R  P+A+I+G  ER +G + +KDL  G E+S+EI++N +WRE +
Sbjct: 418 LGGSG-MKAQLKYADKRGAPIAVIEGEDERMKGEVTLKDLILGSEMSKEIEDNAAWREGQ 476

Query: 471 VAQITIPISELVSTVKKILQENK 493
            AQ+ +P + LV  V  +L  ++
Sbjct: 477 PAQVAVPRARLVEEVMAMLARHR 499


>gi|306840982|ref|ZP_07473723.1| histidyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289039|gb|EFM60304.1| histidyl-tRNA synthetase [Brucella sp. BO2]
          Length = 502

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 283/499 (56%), Positives = 359/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVKELADMQALFFAGGY-DGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ SL +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQSLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|110632783|ref|YP_672991.1| histidyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110283767|gb|ABG61826.1| histidyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 503

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 278/496 (56%), Positives = 357/496 (71%), Gaps = 11/496 (2%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRG  D    +IR  + ++  IR +YE YGF+P+ETPL+EY+D+LGKF
Sbjct: 15  MADKADKVKARLPRGLVDRHPADIRAVDEMMAKIRAVYELYGFEPVETPLIEYTDALGKF 74

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QD+D QW+SLRYDLTAPLAR+VAENF+ +  P R+YR G VFRNEK
Sbjct: 75  LPDQDRPNEGVFSFQDEDEQWLSLRYDLTAPLARFVAENFERLPKPYRSYRAGWVFRNEK 134

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+    ADAEMCMMMAD +EA+GIKR DY I +NNRK+LDG+L
Sbjct: 135 PGPGRFRQFMQFDADTVGTPGVAADAEMCMMMADVMEALGIKRGDYVIRVNNRKVLDGVL 194

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E IG+  +    ++L VLRAIDKLDKFG +GVK LLG+GR D SGDFTKGA L +EQ D 
Sbjct: 195 EAIGVTSE---GQKLTVLRAIDKLDKFGPEGVKQLLGKGRLDESGDFTKGAELGAEQQDT 251

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +++    +   S               +G +EL  I+ LV  +GY S+RI+I  ++VRGL
Sbjct: 252 VLAMCLGEDGGSAAAAR-----NEIWAQGADELREIAALVSAAGYGSDRIRIDPSVVRGL 306

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           EYYTG V+EA L FPV+NE  + V FGSVGGGGRYDGLVSRF+G+ VPATGFSIG+SRL+
Sbjct: 307 EYYTGPVFEAELTFPVVNEDGETVRFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLM 366

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            ALK+L       + + PV++  MD D++SL +YQ    +LR AGIRAEM+LG       
Sbjct: 367 TALKNLGKLE-TAEAVAPVVVLVMDKDTESLGRYQRLVSLLRQAGIRAEMYLG-GAGMKA 424

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           Q+KYADRR  P  +IQG  ER +G +QIKDL +GK LS EI++N +WRE+R AQ ++P S
Sbjct: 425 QMKYADRRGSPCVVIQGGDEREKGEVQIKDLVEGKRLSEEIEDNVTWRESRPAQFSVPES 484

Query: 480 ELVSTVKKILQENKEE 495
           E+V+ VK++L    +E
Sbjct: 485 EMVAAVKRVLDAQAKE 500


>gi|306845505|ref|ZP_07478074.1| histidyl-tRNA synthetase [Brucella sp. BO1]
 gi|306273826|gb|EFM55653.1| histidyl-tRNA synthetase [Brucella sp. BO1]
          Length = 502

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 283/499 (56%), Positives = 359/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ SL +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQSLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|254691380|ref|ZP_05154634.1| histidyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|256256565|ref|ZP_05462101.1| histidyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260756993|ref|ZP_05869341.1| histidyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260882804|ref|ZP_05894418.1| histidyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297249922|ref|ZP_06933623.1| histidyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260677101|gb|EEX63922.1| histidyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260872332|gb|EEX79401.1| histidyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297173791|gb|EFH33155.1| histidyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 502

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 281/499 (56%), Positives = 358/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVS F+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSHFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +L +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|17989401|ref|NP_542034.1| histidyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|225686042|ref|YP_002734014.1| histidyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256043107|ref|ZP_05446050.1| histidyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256262835|ref|ZP_05465367.1| histidyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|260564332|ref|ZP_05834817.1| histidyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265989539|ref|ZP_06102096.1| histidyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|32130130|sp|Q8YB45|SYH_BRUME RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|254782322|sp|C0RKC7|SYH_BRUMB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|17985276|gb|AAL54298.1| histidyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|225642147|gb|ACO02060.1| histidyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|260151975|gb|EEW87068.1| histidyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263000208|gb|EEZ12898.1| histidyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092657|gb|EEZ16878.1| histidyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410368|gb|ADZ67432.1| histidyl-tRNA synthetase [Brucella melitensis M28]
 gi|326553661|gb|ADZ88300.1| histidyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 502

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 283/499 (56%), Positives = 360/499 (72%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +LS+YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLSRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|256158097|ref|ZP_05456015.1| histidyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256252948|ref|ZP_05458484.1| histidyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261220040|ref|ZP_05934321.1| histidyl-tRNA synthetase [Brucella ceti B1/94]
 gi|265996612|ref|ZP_06109169.1| histidyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|260918624|gb|EEX85277.1| histidyl-tRNA synthetase [Brucella ceti B1/94]
 gi|262550909|gb|EEZ07070.1| histidyl-tRNA synthetase [Brucella ceti M490/95/1]
          Length = 502

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 282/499 (56%), Positives = 359/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAIVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +L +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|23499949|ref|NP_699389.1| histidyl-tRNA synthetase [Brucella suis 1330]
 gi|161620267|ref|YP_001594153.1| histidyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|254702605|ref|ZP_05164433.1| histidyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|260568487|ref|ZP_05838956.1| histidyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261753187|ref|ZP_05996896.1| histidyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|32130112|sp|Q8FX93|SYH_BRUSU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189082286|sp|A9MDU4|SYH_BRUC2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|23463528|gb|AAN33394.1| histidyl-tRNA synthetase [Brucella suis 1330]
 gi|161337078|gb|ABX63382.1| histidyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260155152|gb|EEW90233.1| histidyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261742940|gb|EEY30866.1| histidyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 502

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 282/499 (56%), Positives = 359/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAEGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +L +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|163844376|ref|YP_001622031.1| histidyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|254699481|ref|ZP_05161309.1| histidyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254706264|ref|ZP_05168092.1| histidyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254711443|ref|ZP_05173254.1| histidyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254712044|ref|ZP_05173855.1| histidyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254715113|ref|ZP_05176924.1| histidyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256029927|ref|ZP_05443541.1| histidyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|260166969|ref|ZP_05753780.1| histidyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261216821|ref|ZP_05931102.1| histidyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261313709|ref|ZP_05952906.1| histidyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261319049|ref|ZP_05958246.1| histidyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261319688|ref|ZP_05958885.1| histidyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261749934|ref|ZP_05993643.1| histidyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261756356|ref|ZP_06000065.1| histidyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265986947|ref|ZP_06099504.1| histidyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|189082287|sp|A9WXP3|SYH_BRUSI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|163675099|gb|ABY39209.1| histidyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|260921910|gb|EEX88478.1| histidyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261292378|gb|EEX95874.1| histidyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261298272|gb|EEY01769.1| histidyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261302735|gb|EEY06232.1| histidyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261736340|gb|EEY24336.1| histidyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261739687|gb|EEY27613.1| histidyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|264659144|gb|EEZ29405.1| histidyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 502

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 282/499 (56%), Positives = 359/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +L +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|254500679|ref|ZP_05112830.1| histidyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222436750|gb|EEE43429.1| histidyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 509

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 285/503 (56%), Positives = 356/503 (70%), Gaps = 9/503 (1%)

Query: 1   MGKK-TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M KK  KL+A LPRGF D    +IR  + +L  IR +YE+YGFDP+ETP  EY+D LGKF
Sbjct: 1   MAKKPNKLKARLPRGFVDRSAADIRATDEMLSKIRQVYESYGFDPVETPAFEYTDCLGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN GVFS+QDDD QW+SLRYDLTAPLAR+V+EN + I  P RTYR G VFRNEK
Sbjct: 61  LPDTDRPNAGVFSVQDDDEQWMSLRYDLTAPLARHVSENINEIQLPYRTYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+    ADAEMCMMMAD +EA+GI R  Y I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPGVQADAEMCMMMADAMEALGIPRGQYVIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E +GL  +D    RL VLRA+DKLDKFG++GVKLLLG+GR D+SGDFTKGA L ++QI +
Sbjct: 181 EAVGLGDEDDAERRLTVLRAMDKLDKFGIEGVKLLLGDGRKDDSGDFTKGAGLDADQIGM 240

Query: 240 MVSFL-----SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +V+ +      I+       +  L     A      ++  +  LV+ SGY ++RI    +
Sbjct: 241 IVNLIAAEASGINQTAFSEHIDYLFDNHPAVSSAGADIGELLHLVKASGYETDRIIADPS 300

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGLEYYTG VYEA L FPV NEK + V FGSVGGGGRYDGLV RF G++VPATGFSIG
Sbjct: 301 VVRGLEYYTGMVYEAELLFPVTNEKGEVVQFGSVGGGGRYDGLVKRFTGRDVPATGFSIG 360

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           +SRL+ ALK+L         + PVL+T MD D+++L +YQ   Q LR AGIRAEM+ G+ 
Sbjct: 361 VSRLMTALKNLGK-LQTANVVAPVLVTVMDGDTEALGRYQKMVQDLRQAGIRAEMYQGNW 419

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK--NNESWREARVA 472
           K FGNQLKYADRR CP+AIIQG+ ER  G +QIKDL +G  L+ E    +N +WRE+R A
Sbjct: 420 KKFGNQLKYADRRGCPIAIIQGSDEREAGEIQIKDLIEGARLASESTDVDNVTWRESRPA 479

Query: 473 QITIPISELVSTVKKILQENKEE 495
           Q+T   ++L+  V+ IL    E+
Sbjct: 480 QVTANEADLIEAVRGILDAQAED 502


>gi|148557840|ref|YP_001257239.1| histidyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|166227946|sp|A5VTT4|SYH_BRUO2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|148369125|gb|ABQ61997.1| histidyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 502

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 281/499 (56%), Positives = 358/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMAD LE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADALERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +L +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|62317134|ref|YP_222987.1| histidyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|83269119|ref|YP_418410.1| histidyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189022396|ref|YP_001932137.1| histidyl-tRNA synthetase [Brucella abortus S19]
 gi|237816696|ref|ZP_04595688.1| histidyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254698416|ref|ZP_05160244.1| histidyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260544371|ref|ZP_05820192.1| histidyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260762876|ref|ZP_05875208.1| histidyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|75505152|sp|Q579Q8|SYH_BRUAB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123754452|sp|Q2YIH9|SYH_BRUA2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558657|sp|B2SCY7|SYH_BRUA1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|62197327|gb|AAX75626.1| HisS, histidyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82939393|emb|CAJ12347.1| tRNA synthetases, class-II (G, H, P and S):Anticodon binding
           domain:Histidyl-tRNA synthetase, class
           IIa:Aminoacyl-transfer RN [Brucella melitensis biovar
           Abortus 2308]
 gi|189020970|gb|ACD73691.1| histidyl-tRNA synthetase [Brucella abortus S19]
 gi|237787509|gb|EEP61725.1| histidyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260097642|gb|EEW81516.1| histidyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260673297|gb|EEX60118.1| histidyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 502

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 281/499 (56%), Positives = 358/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +L +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +W E+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWLESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|256111909|ref|ZP_05452865.1| histidyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265993358|ref|ZP_06105915.1| histidyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262764228|gb|EEZ10260.1| histidyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 502

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 282/496 (56%), Positives = 359/496 (72%), Gaps = 6/496 (1%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKFLPD
Sbjct: 4   KADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKFLPD 63

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK GP
Sbjct: 64  QDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEKPGP 123

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L+ I
Sbjct: 124 GRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVLDAI 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           GL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ +++
Sbjct: 184 GLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEKVLA 243

Query: 243 FL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++VRGL
Sbjct: 244 FTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVVRGL 302

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           EYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+SRL+
Sbjct: 303 EYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLM 362

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            ALK+L     +   +GPV++  MD D+ +LS+YQ     LR AGIRAEM++G S     
Sbjct: 363 TALKNLGKLDVS-DTVGPVVVLVMDKDTQNLSRYQKMVSDLRKAGIRAEMYVGGSG-MKA 420

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+   
Sbjct: 421 QMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITVRED 480

Query: 480 ELVSTVKKILQENKEE 495
            LV  V++IL     +
Sbjct: 481 GLVDAVREILDAQARD 496


>gi|294853205|ref|ZP_06793877.1| histidyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294818860|gb|EFG35860.1| histidyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 502

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 282/499 (56%), Positives = 359/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFADGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +L +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|256014973|ref|YP_003104982.1| histidyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|255997633|gb|ACU49320.1| histidyl-tRNA synthetase [Brucella microti CCM 4915]
          Length = 502

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 282/499 (56%), Positives = 359/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +L +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNITWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|254731863|ref|ZP_05190441.1| histidyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260759633|ref|ZP_05871981.1| histidyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260669951|gb|EEX56891.1| histidyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
          Length = 502

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 281/499 (56%), Positives = 357/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y  YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYYLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +L +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +W E+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWLESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|254695320|ref|ZP_05157148.1| histidyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261215690|ref|ZP_05929971.1| histidyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260917297|gb|EEX84158.1| histidyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 502

 Score =  368 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 280/499 (56%), Positives = 357/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+    R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKLYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDF KGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFAKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +L +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|254719924|ref|ZP_05181735.1| histidyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984931|ref|ZP_06097666.1| histidyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838512|ref|ZP_07471350.1| histidyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264663523|gb|EEZ33784.1| histidyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406379|gb|EFM62620.1| histidyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 502

 Score =  368 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 283/499 (56%), Positives = 359/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F      D  +++  L  +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVKELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ SL +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVSDM-VGPVVVLVMDKDTQSLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVGAVREILDAQARD 496


>gi|239833531|ref|ZP_04681859.1| histidyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239821594|gb|EEQ93163.1| histidyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 520

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 281/499 (56%), Positives = 354/499 (70%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 19  MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 78

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS  DDD QW+SLRYDLTAPLARYVAENF+++  P R+YR G VFRNEK
Sbjct: 79  LPDQDRPNEGVFSFLDDDDQWLSLRYDLTAPLARYVAENFESLPKPYRSYRNGWVFRNEK 138

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 139 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIRRGDYVIRVNNRKVLDGVL 198

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 199 DAIGLQGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAELPDASIEK 258

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           ++SF     +    ++  L+ +V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 259 ILSFTAAGGVTGADTIANLHTVVAGNAKGEEGVTELADMQALFSAGGY-DGRVKIDPSVV 317

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 318 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 377

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +      V+   MD DS SL +YQ     LR AGIRAEM++G S  
Sbjct: 378 RLMTALKNLGKLDVSDVVGPVVV-LVMDKDSQSLGRYQKMVSDLRQAGIRAEMYVGGSG- 435

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  IIQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 436 MKAQMKYADRREAPCVIIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 495

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 496 KEEGLVEAVREILASQARD 514


>gi|220924793|ref|YP_002500095.1| histidyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219949400|gb|ACL59792.1| histidyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 508

 Score =  366 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 260/507 (51%), Positives = 336/507 (66%), Gaps = 17/507 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K   L+  LPRG  D    EI    R+L +IR  +E YGF+ +ETP +EY+++LG
Sbjct: 1   MSKPAKAATLKPRLPRGLIDRGPAEIAATERMLQTIRESFELYGFEAVETPFIEYTEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVFS QDDD  W+SLRYDLTAPLARYVAE+FD +  P R+YR G VFRN
Sbjct: 61  KFLPDLDRPNEGVFSFQDDDEAWLSLRYDLTAPLARYVAEHFDAVPKPYRSYRAGYVFRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF+Q D D VG+ +  ADAE+CMM ADTLE VGI R DY + +NNRK+LDG
Sbjct: 121 EKPGPGRFRQFMQFDADIVGAPSVAADAEICMMAADTLERVGIARGDYVVKVNNRKVLDG 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           ++E IGL GDD+   RL VLRAIDKLD+ G+ GV+LLLG GR D SGDFT+GA L+ E I
Sbjct: 181 VMEAIGLGGDDQAGRRLTVLRAIDKLDRLGVDGVRLLLGPGRRDESGDFTRGAGLSDEAI 240

Query: 238 DIMVSFLSID------------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
           D ++ ++S               EK      E+V G+  G +G  EL  I  L   +GY 
Sbjct: 241 DRIIRYVSFQAAPTEGGDRLAFWEKFFGGWVEVVGGSETGRQGIAELHAILRLCEAAGYG 300

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
             R++   ++VRGLEYYTG VYEA L FPV+ E  + V FGSV GGGRYDGLV RF+ + 
Sbjct: 301 HERVRADPSVVRGLEYYTGPVYEAELTFPVVGEDGQTVRFGSVAGGGRYDGLVGRFRAEP 360

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           VPATGFSIG+SRL  AL+ +  S        P  +  +  D + ++ YQ     LR AGI
Sbjct: 361 VPATGFSIGVSRLFSALQ-IVKSPIVAGAAAPGPVVVLVLDREEIAAYQALVARLRDAGI 419

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           R+E++LG++     Q+KYADRR  P  +IQG+ ER+RG +QIKDL +G   +  I +N  
Sbjct: 420 RSELYLGAAG-LKAQMKYADRRGAPAVVIQGSDERARGEVQIKDLIEGARAAEAIASNAE 478

Query: 466 WREARVAQITIPISELVSTVKKILQEN 492
           W+ AR AQ ++P  ELV  ++++L+ +
Sbjct: 479 WKAARPAQFSVPEGELVPRMREVLERH 505


>gi|149201163|ref|ZP_01878138.1| histidyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149145496|gb|EDM33522.1| histidyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 551

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 250/515 (48%), Positives = 333/515 (64%), Gaps = 29/515 (5%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +AE P+GF D    E+  R  +L++I  +Y  YGFD +E+  +E  ++LG
Sbjct: 42  MAKPKKEPRPKAETPKGFRDYFGAEVTTRAAMLNAIAGVYHRYGFDALESSAVETVEALG 101

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF+ QD+D +W++LRYDLTAPLAR  A++ + +  P R Y +GPV+RN
Sbjct: 102 KFLPDVDRPNEGVFAWQDEDEKWLALRYDLTAPLARVYAQHRNDLPTPYRRYAMGPVWRN 161

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VG+++  ADAE+CMM+AD LEAVGI+R DY + +NNRK+L+G
Sbjct: 162 EKPGPGRFRQFYQCDADTVGTASMAADAEICMMLADALEAVGIERGDYVVRVNNRKVLNG 221

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +LE  GL GD+    R +VLRAIDKLD+ G +GV+ LLG GR D SGDFT+GANL  EQ 
Sbjct: 222 VLEVAGLSGDESEFARGVVLRAIDKLDRLGFEGVEQLLGSGRRDASGDFTQGANLADEQK 281

Query: 238 DIMVSFLSIDLE--------------------KSMHELYELVKGTIAGEKGFNELVVISE 277
             ++SFL  + E                     ++  L ELV G+  G +G N+L  ISE
Sbjct: 282 QRIMSFLYGNDEVIGDLGDYEVAMGGQANTTANALDYLRELVHGSFVGLEGVNDLEAISE 341

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
           +V   GY  +RI I  ++VRGL YYTG V+EA L F +++EK +P  FGSV GGGRYD L
Sbjct: 342 MVAAQGYGPDRIVIDPSVVRGLGYYTGPVFEAELTFEILDEKGRPRQFGSVAGGGRYDDL 401

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
           V+RF GQ VPA G SIG+ RL+ AL +               +     D D ++ YQ   
Sbjct: 402 VARFTGQQVPAVGVSIGVDRLLAALHAKGKIG----SAERGPVVVTVMDRDRMADYQAMV 457

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             LR AGIRAE++LG+ KNFGNQ+KYADRR  P+A+I G  E ++G++QIKDL  G +++
Sbjct: 458 GELRQAGIRAEVYLGNPKNFGNQMKYADRRGSPIAVICGGDEFAKGVVQIKDLILGAQIA 517

Query: 458 REIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            E    E W+E R +Q  +P + LV  V+ IL E 
Sbjct: 518 -ENATVEEWKE-RPSQYEVPRAALVDKVRDILAEQ 550


>gi|296444944|ref|ZP_06886906.1| histidyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257612|gb|EFH04677.1| histidyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 497

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 265/498 (53%), Positives = 342/498 (68%), Gaps = 7/498 (1%)

Query: 1   MG--KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M   KK K+ A  PRG AD    E+    R+LD IR++YE YGF+ +ETP +EY+D+LGK
Sbjct: 1   MSEQKKPKIEARSPRGLADRDAAELAATGRMLDVIRSVYELYGFEALETPAIEYTDALGK 60

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           FLPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVA+NFD +  P R+YR G V+RNE
Sbjct: 61  FLPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAQNFDRLPKPFRSYRFGNVYRNE 120

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           K GPGRFRQF+Q D D VG+++  ADAE+CMM ADTLE +GI R DY I IN+RK+LDG+
Sbjct: 121 KPGPGRFRQFMQFDADTVGAASPAADAEICMMAADTLERLGIARGDYVIKINSRKVLDGV 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           ++ IGL GD+    RL VLRAIDK+D+ G +GVKLLLG GR D SGDFT+GA L  + +D
Sbjct: 181 MKAIGLEGDENAGRRLTVLRAIDKMDRLGPEGVKLLLGAGRKDESGDFTRGAGLADDAVD 240

Query: 239 IMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            ++SF         +    L+EL+  +  G +G  EL+ I +LVR +G+   RI+I  +I
Sbjct: 241 TILSFTLGGQYKDGEPRFGLFELLGRSNVGAEGAEELLEIEDLVRDAGFGPERIRIDPSI 300

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGLEYYTG V+EA L F   +EK  PV FGSVGGGGRYDGL+ RF+ +N PATGFSIG+
Sbjct: 301 VRGLEYYTGPVFEADLTFETKDEKGHPVRFGSVGGGGRYDGLIGRFRSENTPATGFSIGV 360

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           SRL  ALK L  S           +  +  D D ++ YQ     LR  G+ AE++LG+S 
Sbjct: 361 SRLYAALK-LVGSPIVAASQRMGPVVVLALDRDRIADYQRMVAALRNGGVAAELYLGASG 419

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               Q+KYAD+RN P  +IQG+ ER++G +QIKDL +G+  S  I  NE W+ AR AQ +
Sbjct: 420 -MKAQMKYADKRNAPAVVIQGSDERAKGEVQIKDLIEGERASAAIATNEEWKAARPAQFS 478

Query: 476 IPISELVSTVKKILQENK 493
            P SELV+ +K +L   +
Sbjct: 479 TPESELVTEIKALLARQR 496


>gi|256059578|ref|ZP_05449777.1| histidyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261323546|ref|ZP_05962743.1| histidyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261299526|gb|EEY03023.1| histidyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 502

 Score =  363 bits (930), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 281/499 (56%), Positives = 356/499 (71%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADTLE +GI+R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L    I+ 
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEK 240

Query: 240 MVSFLSIDLEKSMHELYEL---VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F +         +  L   V G   GE+G  EL  +  L    GY   R+KI  ++V
Sbjct: 241 VLAFAAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGY-EGRVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V NE  + VVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ ALK+L     +   +GPV++  MD D+ +L +YQ     LR AGIRAEM++G S  
Sbjct: 360 RLMTALKNLGKLDVS-DTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +GK LS EI++N +WRE+R AQIT+
Sbjct: 418 MKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENKEE 495
               LV  V++IL     +
Sbjct: 478 REDGLVDAVREILDAQARD 496


>gi|170740865|ref|YP_001769520.1| histidyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168195139|gb|ACA17086.1| histidyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 532

 Score =  362 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 258/502 (51%), Positives = 334/502 (66%), Gaps = 14/502 (2%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   L+  LPRG  D    EI    R+L +IR  +E YGF+ +ETP +EY+++LGKFLPD
Sbjct: 31  KPGTLKPRLPRGLVDRGPAEIAATQRMLQTIRESFELYGFEAVETPFIEYTEALGKFLPD 90

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
            DRPN+GVFS QDDD  W+SLRYDLTAPLARYVAE+FD +  P R+YR G VFRNEK GP
Sbjct: 91  LDRPNEGVFSFQDDDEAWLSLRYDLTAPLARYVAEHFDALPKPYRSYRAGYVFRNEKPGP 150

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GRFRQF+Q D D VG+    ADAE+CMM ADTLE VGI R DY + +NNRK+LDG++E I
Sbjct: 151 GRFRQFMQFDADIVGAPTVAADAEICMMAADTLERVGIARGDYVVKVNNRKVLDGVMEAI 210

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           GL GDD+   RL VLRAIDKLD+ G+ GV+LLLG GR D SGDFTKGA L  E ID ++ 
Sbjct: 211 GLGGDDQAGRRLTVLRAIDKLDRLGVDGVRLLLGPGRRDESGDFTKGAGLPDEAIDRIIR 270

Query: 243 FLSID------------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           ++S               E       E+V G+  G +G  EL  I  L   +GY  +R++
Sbjct: 271 YVSFQAAPTDGGDRLAFWENFFGGWAEVVGGSETGRQGIAELHAILRLCEAAGYGHDRVR 330

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              ++VRGLEYYTG VYEA L FPV+ E  + V FGSV GGGRYDGLV RF+ + VPATG
Sbjct: 331 ADPSVVRGLEYYTGPVYEAELTFPVVGEDGQTVRFGSVAGGGRYDGLVGRFRAEPVPATG 390

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           FSIG+SRL  AL+ +  S       GP  +  +  D + ++ YQ     LR AGIR+E++
Sbjct: 391 FSIGVSRLFAALQIVG-SPIVAGAAGPGPVVVLVLDREEIASYQALVAALRQAGIRSELY 449

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG++     Q+KYADRR  P  +IQG+ ER+RG +QIKDL +G   +  I +N  W+ AR
Sbjct: 450 LGAAG-LKAQMKYADRRGAPAVVIQGSDERARGEVQIKDLIEGARAAEAIASNAEWKAAR 508

Query: 471 VAQITIPISELVSTVKKILQEN 492
            AQ ++P +E+V+ ++++L  +
Sbjct: 509 PAQFSVPGAEMVARLREVLGRH 530


>gi|85704830|ref|ZP_01035931.1| histidyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85670648|gb|EAQ25508.1| histidyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 527

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 230/497 (46%), Positives = 321/497 (64%), Gaps = 15/497 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +AE P+GF D    E+  R  +L++I  +Y  YGFD +E+  +E  ++LG
Sbjct: 38  MAKPKKEPRPKAETPKGFRDYFGAEVTTRAAMLNAIAGVYHRYGFDALESSAVETVEALG 97

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF+ QD+D +W++LRYDLTAPLAR  A++ + +  P R Y +GPV+RN
Sbjct: 98  KFLPDVDRPNEGVFAWQDEDEKWLALRYDLTAPLARVYAQHRNDLPTPYRRYAMGPVWRN 157

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK G GRFRQF QCD D VG+++  ADAE+C M+AD LE VGI+R DY + +NNRK+L+G
Sbjct: 158 EKPGLGRFRQFYQCDADTVGTASMAADAEICAMLADALEEVGIERGDYVVRVNNRKVLNG 217

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +LE  G+   D+   +  VLR IDK DK G  GV+ LLG+GR D SG +  G  L+ +  
Sbjct: 218 VLEATGVTEPDQ---QAAVLRTIDKFDKVGESGVRELLGKGRLDASGAYIDGVGLSDDHA 274

Query: 238 DIMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
             +++FL     D  +++  L   V G+  G +G +EL  I+ L+   GY+ +RI I  +
Sbjct: 275 APVLAFLTSKGRDAPETLSNLRAAVGGSEIGTRGVDELEEIATLLEAQGYSPDRIVIDPS 334

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL YYTG V+EA L F +++EK +P  FGSV GGGRYD LV+RF GQ VPA G SIG
Sbjct: 335 VVRGLGYYTGPVFEAELTFEIVDEKGRPRQFGSVAGGGRYDDLVARFTGQQVPAVGVSIG 394

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL+ AL +        +      +     D D ++ YQ     LR AGIRAE++LG+ 
Sbjct: 395 VDRLLAALHAKGKIGGAERG----PVVVTVMDRDRMADYQAMVGALRQAGIRAEVYLGNP 450

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           K+FGNQ+KYADRR  P+A+I G  E  +G++QIKDL  G +++ E    E W+E R +Q 
Sbjct: 451 KSFGNQMKYADRRGAPVAVIAGGDEFEKGVVQIKDLILGAQIA-ENATVEEWKE-RPSQY 508

Query: 475 TIPISELVSTVKKILQE 491
            +P ++LV  V++IL E
Sbjct: 509 EVPRAQLVEKVREILAE 525


>gi|254461602|ref|ZP_05075018.1| histidyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206678191|gb|EDZ42678.1| histidyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 494

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 248/499 (49%), Positives = 333/499 (66%), Gaps = 13/499 (2%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A+ P+GF D    E+  R  +L  I  +Y  YGFD +E+  +E  ++LG
Sbjct: 1   MAKVKKAPRPKAQAPKGFRDYLGAEVTERAEMLQKIAGVYHRYGFDALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ-DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           KFLPD DRPN+GVF+ Q D+   W++LRYDLTAPLAR  A+N + +  P R Y +GPV+R
Sbjct: 61  KFLPDVDRPNEGVFAWQEDETADWLALRYDLTAPLARVYAQNRNELPTPYRRYAMGPVWR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           NEK GPGR+RQF QCD D VG+ +  ADAE+C M++DTLE VGI+R DY + INNRK+L+
Sbjct: 121 NEKPGPGRYRQFYQCDADTVGAGSVAADAEICAMLSDTLEVVGIERGDYIVRINNRKVLN 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G++E  G+ GDDK +ER IVLRAIDKLD+ G  GV+ LLGEGR D SGD+TKGA L+  Q
Sbjct: 181 GVMEVCGIAGDDKADERGIVLRAIDKLDRLGENGVRALLGEGRKDESGDYTKGAGLSDAQ 240

Query: 237 IDIMVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            DI++ F+S        +   L ELV G+  GE+G NEL+ I+EL+   GY  +RI+I  
Sbjct: 241 ADIVMGFMSAKRDSGAATAARLSELVAGSKVGEEGVNELLTIAELLEAQGYGPDRIEIDP 300

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           ++VRGL YYTG V+EA L F + +EK +P  FGSV GGGRYD LV RF GQ VPATG SI
Sbjct: 301 SVVRGLGYYTGPVFEAELTFEIQDEKGRPRNFGSVAGGGRYDDLVKRFTGQEVPATGVSI 360

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+ RL+ AL+        ++      +     D   ++ YQ     LR  GIRAE++LG+
Sbjct: 361 GVDRLLAALRMKGR----VENHAAGPVVVTVMDKGRMADYQSMVSELRNVGIRAEVYLGN 416

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            KNFGNQLKYAD+RN P+AII+G  E+ +G++QIKDL  G +++ E    E W+  R +Q
Sbjct: 417 PKNFGNQLKYADKRNSPIAIIEGGDEKEKGVIQIKDLILGAKIA-ESATLEEWK-DRPSQ 474

Query: 474 ITIPISELVSTVKKILQEN 492
             +P  +LV+ V++IL+  
Sbjct: 475 YEVPRGDLVAKVREILESQ 493


>gi|158425858|ref|YP_001527150.1| histidyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158332747|dbj|BAF90232.1| histidyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 502

 Score =  356 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 260/498 (52%), Positives = 330/498 (66%), Gaps = 9/498 (1%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M   TK +A LPRG  D    E+     +L+ IR +YE YGF+ +ETP +EY+D+LGKFL
Sbjct: 1   MATDTKPKARLPRGLVDRTGAELVATRAMLEKIRAVYELYGFEALETPAIEYTDALGKFL 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           PD+DRPN+GVFS QDDD QW+SLRYDLTAPLARYVAE+FD +  P R+YR G VFRNEK 
Sbjct: 61  PDQDRPNEGVFSFQDDDDQWLSLRYDLTAPLARYVAEHFDALPKPYRSYRNGYVFRNEKP 120

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           GPGRFRQF+Q D D VG+ +  ADAE+CMM ADTL+AVGI R DY I INNRK+LDG+LE
Sbjct: 121 GPGRFRQFMQFDADTVGAPSVAADAEICMMAADTLDAVGIARGDYVIKINNRKVLDGVLE 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL----GEGRTDNSGDFTKGANLTSEQ 236
            IGL G +    RL VLRAIDKLDK G  GV+ LL     E     SGDFTKGA L S  
Sbjct: 181 AIGLGGAENAGRRLTVLRAIDKLDKIGPAGVRDLLGAGRWENPEAKSGDFTKGAGLESAA 240

Query: 237 IDIMVSFLS-IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           ID +++F+        + +L  +V  + AG+ G  EL  I+ LV  +GY+  RI I  ++
Sbjct: 241 IDRVIAFVEAGTGTAGLAKLDAVVGESEAGKAGLAELREIAALVAAAGYDDGRIVIDPSV 300

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGLEYYTG VYEA L F V +EK +PV FGSV GGGRYDGLV+RF+G+ VPATGFSIG+
Sbjct: 301 VRGLEYYTGPVYEAELTFEVKDEKGRPVRFGSVAGGGRYDGLVARFRGEPVPATGFSIGV 360

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           SRL+ AL  L       +      +  +  D D  + Y      LR  GIRAEM+LG S 
Sbjct: 361 SRLLHALAHLGKMETLAEIGP---VVVLVMDRDRAADYMAMVAKLRANGIRAEMYLGGSG 417

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               Q+KYAD+RN P  IIQG+ E+  G +QIKDL +G  ++ +I ++  +R AR AQ +
Sbjct: 418 -MKAQMKYADKRNAPAVIIQGSNEKDAGEVQIKDLVEGARIAADIADHAEYRAARPAQFS 476

Query: 476 IPISELVSTVKKILQENK 493
           +   E+V  ++ +L+   
Sbjct: 477 VKEEEMVEAIRGVLERRA 494


>gi|298294394|ref|YP_003696333.1| histidyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296930905|gb|ADH91714.1| histidyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 546

 Score =  356 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 272/542 (50%), Positives = 348/542 (64%), Gaps = 53/542 (9%)

Query: 1   MGKKT--KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M K    KL+A +PRGFAD    E+     +L++IR +YE YGF+ +ETP +EY+D+LGK
Sbjct: 1   MAKDKSTKLKARMPRGFADRGPGELAGTREMLETIRKVYELYGFEALETPFIEYTDALGK 60

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           FLPD+DRPN+GVFS QDDD QW+SLRYDLTAPLAR+VAENFD +  P R+YR G VFRNE
Sbjct: 61  FLPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARHVAENFDRVPKPFRSYRAGWVFRNE 120

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           K GPGRFRQF+Q D D VG+    ADAE+CMM ADTLEA+GIKR DY I +NNRK+LDG+
Sbjct: 121 KPGPGRFRQFMQFDADTVGAPTVAADAEICMMAADTLEALGIKRGDYVIKVNNRKVLDGV 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTS 234
           LE IGL GD+    RL VLRAIDKLDK G  GV+ LLGEGR +     SGDFTKGA L++
Sbjct: 181 LEAIGLGGDENAARRLTVLRAIDKLDKVGTAGVRDLLGEGRWENPEAKSGDFTKGAGLSN 240

Query: 235 EQIDIMVSFL-------------------------------------------SIDLEKS 251
           EQ D +++++                                            I+   +
Sbjct: 241 EQADRVLAYVQAGVPVWENGAAVAAEHGDVTAWIETERETWFGQDFGDVSREFQINNAWT 300

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           +  L +         +G NEL  I  L  ++GY ++RI+I  ++VRGLEYYTG V+EA L
Sbjct: 301 IKVLKKEFADNALALEGLNELEEIQALAARTGYFADRIRIDPSVVRGLEYYTGPVFEAEL 360

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F V +EK +PV FGSVGGGGRYDGLV RF+G+ VPATGFSIG+SRL  AL  L++    
Sbjct: 361 TFEVKDEKGRPVRFGSVGGGGRYDGLVGRFRGEQVPATGFSIGVSRLASALSYLKADAKP 420

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  +  D D  + Y      LR  GIRAEM+LG+ KN GNQ KYADRRN P 
Sbjct: 421 ----EFGPVVVVVMDRDQTAHYMGLVARLRKEGIRAEMYLGNPKNLGNQFKYADRRNAPC 476

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            +IQG+ ER+ G +QIKDL +G + +  I +N  WRE+R AQ + P +EL++ VK++L  
Sbjct: 477 VVIQGSDERASGQVQIKDLIEGAKAAAAITDNAEWRESRPAQFSCPEAELIAKVKEVLDH 536

Query: 492 NK 493
           + 
Sbjct: 537 HG 538


>gi|188580939|ref|YP_001924384.1| histidyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179344437|gb|ACB79849.1| histidyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 503

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 253/504 (50%), Positives = 336/504 (66%), Gaps = 15/504 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L+  LPRGF D    ++  + R+LD+IR  +E YGF+ +ETP +EY+++LGKFL
Sbjct: 1   MAKADTLKPRLPRGFPDRTEADLLAQGRMLDTIRQTFELYGFEALETPFVEYTEALGKFL 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           PD DRPN+GVFS QDDD QW+SLRYDLTAPLAR+VAENFD I  P R+YR G VFRNEK 
Sbjct: 61  PDLDRPNEGVFSFQDDDEQWLSLRYDLTAPLARHVAENFDAISKPYRSYRAGYVFRNEKP 120

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           GPGRFRQF+Q D D VG+++  ADAE CM+MADTLE +G+    Y + +NNRK+LDG++E
Sbjct: 121 GPGRFRQFMQFDADIVGAASVAADAETCMLMADTLERLGL-AGQYVVKVNNRKVLDGVME 179

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            IGL G DK  +RL VLRAIDKLD+ G  GV+LLLG GR D SGDFTKGA L  + I+ +
Sbjct: 180 AIGLAGPDKAGQRLTVLRAIDKLDRLGADGVRLLLGPGRKDESGDFTKGAGLGDDAIERI 239

Query: 241 VSFLSID------------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           ++++  +             EK       +V  +  G +G  EL  I  L   +GY  +R
Sbjct: 240 LAYVGFEASPHDGADRMAFWEKFFGSWQAVVGTSETGREGIAELHAIMRLCEAAGYGHDR 299

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           ++   ++VRGLEYYTG VYEA L FPV NE  + V FGSV GGGRYDGLV RF+ + VPA
Sbjct: 300 VRADPSVVRGLEYYTGPVYEAELTFPVTNEDGQTVRFGSVAGGGRYDGLVGRFRSEPVPA 359

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           TGFSIG+SRL  AL+ L  S        P  +  +  D +++++YQ     LR+  IRAE
Sbjct: 360 TGFSIGVSRLFSALR-LTKSPLVEGAAKPGPVVVLVLDRENIAEYQALVARLRSENIRAE 418

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++LG++     Q+KYADRR  P+ +IQG+ ER  G +QIKDL +G   +  I +N  W+ 
Sbjct: 419 LYLGAAG-MKAQMKYADRRRAPVVVIQGSNEREAGEVQIKDLIEGARAAEAIASNAEWKA 477

Query: 469 ARVAQITIPISELVSTVKKILQEN 492
           AR AQ+++P+  +V TV++ L  +
Sbjct: 478 ARPAQVSVPVERMVETVRETLARH 501


>gi|163744571|ref|ZP_02151931.1| histidyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161381389|gb|EDQ05798.1| histidyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 498

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 241/502 (48%), Positives = 329/502 (65%), Gaps = 17/502 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A+ P+GF D    E+  R  +L  I  +Y  YGFD +E+  +E  ++LG
Sbjct: 1   MAKPKKTPRPKAQTPKGFRDYFGTEVTHRAEMLSKIAAVYHRYGFDALESSGVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ-----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           KFLPD DRPN+GVF+ Q     D  G W++LRYDLTAPLAR  A++ + +  P R Y +G
Sbjct: 61  KFLPDVDRPNEGVFAWQEDSEGDKPGDWLALRYDLTAPLARVYAQHRNDLPMPYRRYAMG 120

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           PV+RNEK GPGRFRQF QCD D VG+ +  ADAE+C M+AD LE VGI R DY + +NNR
Sbjct: 121 PVWRNEKPGPGRFRQFYQCDADTVGAPSVAADAEICAMLADCLEEVGIARGDYVVRVNNR 180

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+L+G+LE  GL GDDK  ER IVLRAIDKLD+ G +GV+ LLGEGR D+SGDFTKGA L
Sbjct: 181 KVLNGVLEVAGLAGDDKDTERGIVLRAIDKLDRLGPEGVRALLGEGRKDDSGDFTKGAGL 240

Query: 233 TSEQIDIMVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
              Q D+++ F+        +++  L ELV G+  G +G +EL +IS+L+   GY  +R+
Sbjct: 241 EDAQADVVMGFMQAKRDSGAETVARLRELVAGSDVGVQGVDELELISDLLAAGGYGPDRV 300

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I  ++VRGL YYTG V+EA L F + +EK +   FGSV GGGRYD LV RF GQ VPAT
Sbjct: 301 EIDPSVVRGLGYYTGPVFEAELTFEIKDEKGRARNFGSVAGGGRYDDLVKRFTGQEVPAT 360

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G SIG+ RL+ AL +       +       +     D D ++ YQ     LR AGIRAE+
Sbjct: 361 GVSIGVDRLLAALAAKGR----LASEATGPVVVTVMDRDRMADYQAMVAELRQAGIRAEV 416

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +LG+ KNFGNQ+KYAD+R  P+ +I+G  E+ RG++QIKD+  G +++++  +++ W+E 
Sbjct: 417 YLGNPKNFGNQMKYADKRQSPVVVIEGGDEQDRGVVQIKDMVLGAQMAQD-ASHDEWKE- 474

Query: 470 RVAQITIPISELVSTVKKILQE 491
           R  Q  +  S+L+  V+ IL  
Sbjct: 475 RKNQYEVKRSDLIKAVRDILDR 496


>gi|13475767|ref|NP_107334.1| histidyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|32130141|sp|Q987T0|SYH_RHILO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|14026523|dbj|BAB53120.1| histidyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 500

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 277/500 (55%), Positives = 353/500 (70%), Gaps = 10/500 (2%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K +A LPRGFAD   ++IR   +++ +IR++YE YGF+P + PL+EY+D+LGKF
Sbjct: 1   MADKSEKTKARLPRGFADRSAEDIRAVEKMMATIRSVYELYGFEPADQPLIEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAP AR+VAEN++ +  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPTARFVAENYERLPKPYRSYRSGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D +G+    ADAEM MMMAD +EA+GIKR DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTIGTPGVAADAEMAMMMADVMEALGIKRGDYVIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSE 235
           E IGL G++ +  RL VLRAIDKLDK G +GVKLLLG GR D      GDF KGA L + 
Sbjct: 181 EAIGLGGEENIGRRLTVLRAIDKLDKLGPEGVKLLLGPGRWDGGKEGEGDFAKGAGLNNG 240

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           Q + ++   + + + +      +V      ++G  EL  I  LVR +GY  +RI +  ++
Sbjct: 241 QAEAVLQATARNAQAA---QDSVVDSNATYQEGVGELATIEALVRAAGYGEDRIAMDRSV 297

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGLEYYTG V+EA L   + NE  + V FGSVGGGGRYDGLVSRF+G+ VPATGFSIG+
Sbjct: 298 VRGLEYYTGPVFEAELLAEIPNEDGQIVRFGSVGGGGRYDGLVSRFRGEPVPATGFSIGV 357

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           SRL+ ALK+L    +N   + PV++  MD D++SL +YQ     LR AGIR+EM+LG   
Sbjct: 358 SRLMTALKNLGK-LDNADVIAPVVVLVMDKDTESLGRYQKMVSELRAAGIRSEMYLG-GA 415

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               QLKYADRR CP+AIIQG  ER++G LQIKDL +G  +S EI +N  WR AR AQ+T
Sbjct: 416 GMKAQLKYADRRGCPVAIIQGGDERAKGELQIKDLIEGARMSAEITDNAEWRAARPAQVT 475

Query: 476 IPISELVSTVKKILQENKEE 495
           +  SELV+ VKKIL    EE
Sbjct: 476 VAESELVAEVKKILAAQAEE 495


>gi|149914034|ref|ZP_01902566.1| histidyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149812318|gb|EDM72149.1| histidyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 491

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 234/500 (46%), Positives = 328/500 (65%), Gaps = 15/500 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K+ K    +AE P+GF D    E+  R  +L  I  +Y  YGF+ +E+  +E  ++LG
Sbjct: 1   MAKEKKQPRPKAETPKGFRDYFGTEVTERAEMLRKIAGVYHLYGFEALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF+ Q+D+G W++LRYDLTAPLAR  A++ + +  P R Y +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFAWQEDEGDWLALRYDLTAPLARVYAQHRNDLPTPYRRYAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VG+ +  ADAE+C M+ADTLE VGI R DY + +NNRK+L+G
Sbjct: 121 EKPGPGRFRQFYQCDADTVGAPSVAADAEICAMLADTLEQVGIPRGDYIVRVNNRKVLNG 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +LE +GL   D+  +R  VLR IDK DK G  GV+ LLG+GR D SG +  G  L+ +Q 
Sbjct: 181 VLEVMGL---DEGAQRDAVLRTIDKFDKVGESGVRELLGKGRLDASGAYIDGVGLSDDQA 237

Query: 238 DIMVSFLSIDLE---KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + +++FL+   E   +++  L   V+ +  G +G  EL  I++L+   GY+++RI I  +
Sbjct: 238 EPVLAFLTSKAETAAQTLDNLRAAVRESAIGLEGVQELETIADLLEAQGYDTDRIVIDPS 297

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL YYTG V+EA L F +++EK +   FGSV GGGRYD LV RF GQ VPATG SIG
Sbjct: 298 VVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVAGGGRYDDLVKRFTGQAVPATGVSIG 357

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL+ AL+        ++      +     D D ++ YQ     LR AGIRAE++LG+ 
Sbjct: 358 VDRLLAALREKGRIGGTVEG----PVVVTVMDRDRMADYQHMVGELRRAGIRAEVYLGNP 413

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           KNFGNQ+KYADRR  P+A+I+G  E+ RG++QIKDL  G +++ E    E W+E R +Q 
Sbjct: 414 KNFGNQMKYADRRGAPIAVIEGGDEKERGVIQIKDLILGAQMA-ENATLEEWKE-RPSQF 471

Query: 475 TIPISELVSTVKKILQENKE 494
            +P ++LV  V++IL    +
Sbjct: 472 EVPRAQLVEKVREILDGQAQ 491


>gi|319782248|ref|YP_004141724.1| histidyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168136|gb|ADV11674.1| histidyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 500

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 276/500 (55%), Positives = 349/500 (69%), Gaps = 10/500 (2%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K +A LPRGFAD   ++IR   +++ +IR++YE YGF+P + PL+EY+D+LGKF
Sbjct: 1   MADKSEKTKARLPRGFADRSAEDIRAVEKMMATIRSVYELYGFEPADQPLIEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAP ARYVAEN++ +  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDDQWLSLRYDLTAPTARYVAENYERLPKPYRSYRSGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D +G+    ADAEM MMMAD +EA+GIKR DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTIGTPGVAADAEMAMMMADVMEALGIKRGDYVIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSE 235
           E IGL G++    RL VLRAIDKLDK G +GVKLLLG GR D      GDF KGA L + 
Sbjct: 181 EAIGLGGEENAGRRLTVLRAIDKLDKLGPEGVKLLLGPGRWDGGKEGEGDFAKGAGLNNG 240

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           Q + ++   +  ++        +V      ++G  EL  I  LVR +GY  +RI +  ++
Sbjct: 241 QAEAVLLATARTIQ---AGQDSMVSSNAIYQEGVGELATIETLVRAAGYGEDRIAMDRSV 297

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGLEYYTG V+EA L   + NE  + V FGSVGGGGRYDGLVSRF+G+ VPATGFSIG+
Sbjct: 298 VRGLEYYTGPVFEAELLAEIPNEDGQIVRFGSVGGGGRYDGLVSRFRGEPVPATGFSIGV 357

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           SRL+ ALK+L     +   + PV++  MD D+DSL +YQ     LR AGIR+EM+LG   
Sbjct: 358 SRLMTALKNLGKLDASDV-IAPVVVLVMDKDTDSLGRYQKMVAELRAAGIRSEMYLG-GA 415

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               QLKYADRR CP+AIIQG  ER++G LQIKDL +G  +S EI +N  WR AR AQ+T
Sbjct: 416 GMKAQLKYADRRGCPVAIIQGGDERAKGELQIKDLIEGARMSAEISDNAEWRAARPAQVT 475

Query: 476 IPISELVSTVKKILQENKEE 495
           +   ELV+ V+KIL    EE
Sbjct: 476 VAEGELVAEVRKILAAQAEE 495


>gi|159045495|ref|YP_001534289.1| histidyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189082293|sp|A8LKA5|SYH_DINSH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|157913255|gb|ABV94688.1| histidyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 497

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 241/501 (48%), Positives = 325/501 (64%), Gaps = 16/501 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A+ P+GF D    E+  R  +LD I  +Y  YGFDP+ET  +E  ++LG
Sbjct: 1   MAKPKKTPRPKAQTPKGFRDYFGTEVTERKAMLDKIAEVYHLYGFDPLETSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF+ Q+DD  W++LRYDLTAPLAR  A+  + +  P R Y +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFAWQEDDADWLALRYDLTAPLARVAAQYRNDLPSPYRRYAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VG+ +  ADAE+C M+A  LEAVGI R DY + +NNRK+L+G
Sbjct: 121 EKPGPGRFRQFYQCDADTVGAPSVAADAEVCAMLATALEAVGIARGDYIVRVNNRKVLNG 180

Query: 178 ILEKIGL----HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + E  GL    +  D L    I +RA+DK D+ G  GVK LLG+GR D SG F +GANL 
Sbjct: 181 VFESAGLLDSEYLADNLKRVGIAIRAVDKFDRLGSDGVKALLGKGREDESGAFVEGANLA 240

Query: 234 SEQIDIMVSFLSIDLE---KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
             QID ++ F +       +++  L ELV  +  G +G  EL  IS+L+   G+  +RI 
Sbjct: 241 EWQIDRILGFATAKQSTELETLDRLTELVGNSDEGLQGVEELKHISDLLSAQGFGPDRIV 300

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I  ++VRGL YYTG V+EA L F V N+K + V FGSV GGGRYD LV RF GQ VPATG
Sbjct: 301 IDPSVVRGLGYYTGPVFEAELTFEVQNDKGQTVQFGSVAGGGRYDDLVKRFTGQAVPATG 360

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL++        +   P  +     D D ++ YQ     LR AGIRAE++
Sbjct: 361 VSIGVDRLLAALRAKG----QAQTAAPGPVIVTVMDRDRIADYQAMVGTLRDAGIRAELY 416

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD+R  P+A+IQG+ E +RG++QIKDL  G +++ E  + + W+ ++
Sbjct: 417 LGNPKNFGNQLKYADKRAAPVAVIQGSDEAARGVVQIKDLVLGAQIA-ESASLDEWK-SQ 474

Query: 471 VAQITIPISELVSTVKKILQE 491
            AQ  +P+++LV+ V+ IL  
Sbjct: 475 PAQREVPVADLVAEVQAILAR 495


>gi|260574975|ref|ZP_05842977.1| histidyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259022980|gb|EEW26274.1| histidyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 494

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 237/489 (48%), Positives = 321/489 (65%), Gaps = 10/489 (2%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           + RAE P+GF D    E+  R  +LD I  +Y  YGFDP+ET  +E  ++LGKFLPD DR
Sbjct: 13  RPRAETPKGFRDYFGAEVTERKAMLDRIAEVYHRYGFDPLETSAVETVEALGKFLPDVDR 72

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           PN+GVF+ QD+D  W++LRYDLTAPLAR  A+  + +  P R Y +GPV+RNEK GPGRF
Sbjct: 73  PNEGVFAWQDEDADWLALRYDLTAPLARVAAQYRNELPSPYRRYAMGPVWRNEKPGPGRF 132

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF QCD D VGS++  ADAE+C M+AD LE VGI R DY + +NNRK+L+G++E IGL 
Sbjct: 133 RQFYQCDADTVGSASVAADAEICAMLADALEVVGIPRGDYVVRVNNRKVLNGVMESIGLT 192

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL- 244
            DD       VLR IDK DK G +GV  LL  GR D SG F KG  L++EQ +I+  FL 
Sbjct: 193 EDDAETREA-VLRTIDKFDKVGREGVLQLLTNGRLDASGAFIKGVGLSNEQAEIVHLFLV 251

Query: 245 --SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
               D  +S+  L +L+  + AG++G  EL  I+ L+   GY  +RI I  ++VRGL YY
Sbjct: 252 SKGEDGNQSLELLSQLIGSSAAGQEGIEELETIASLLAAQGYGPDRIVIDPSVVRGLGYY 311

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG V+EA L F +++EK +   FGSV GGGRYDGLV RF GQ VPATG SIG+ RL+ AL
Sbjct: 312 TGPVFEAELTFEILDEKGRKRQFGSVAGGGRYDGLVERFTGQKVPATGVSIGVDRLLAAL 371

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++       ++      +     D D ++ Y      LR AGIRAE++LG+ KNFGNQLK
Sbjct: 372 RAKGR----LEAGSAGPVVVTVMDRDRMADYMAMVSDLRNAGIRAEVYLGNPKNFGNQLK 427

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           YAD+R  P+A+IQG  E  +G++ +KDL  G ++++     E W+  R AQ+ +P ++LV
Sbjct: 428 YADKRGSPIAVIQGGNEAEKGVVILKDLILGAKIAQS-ATLEEWK-DRPAQMEVPRADLV 485

Query: 483 STVKKILQE 491
           + V+++L +
Sbjct: 486 AAVRRMLAQ 494


>gi|49476041|ref|YP_034082.1| histidyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81696115|sp|Q6G289|SYH_BARHE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|49238849|emb|CAF28134.1| Histidyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 495

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 270/496 (54%), Positives = 355/496 (71%), Gaps = 6/496 (1%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ K +A LPRGF D  + ++     ++  IR +YE YGF+ +ETP+ EY+D LGKFLP
Sbjct: 3   SKQEKTKARLPRGFVDRTSAQLYAIEVMIAQIRQVYELYGFEALETPIFEYTDVLGKFLP 62

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           DEDRPN GVFSLQDDD QW+SLRYDLTAPLARY +ENF+T+  P R+YR+G VFRNEK G
Sbjct: 63  DEDRPNAGVFSLQDDDEQWMSLRYDLTAPLARYFSENFETLPKPYRSYRLGFVFRNEKPG 122

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAE+CMM AD+L+ +G + +DY I +NNRKILD +LEK
Sbjct: 123 PGRFRQFMQFDADIVGTPTVAADAEICMMAADSLQKLGFQHHDYVIRLNNRKILDAVLEK 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +GL G ++   RL VLRAIDKLDKFGL+GV+LLLG+GR D SGDFTKGA L  ++ID ++
Sbjct: 183 VGLAGSEQAQRRLTVLRAIDKLDKFGLEGVRLLLGKGRLDESGDFTKGAELKDKEIDGIL 242

Query: 242 SFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           S L+I+    E++   L ++V  +  G +G  EL  +  +        NRIKI  ++VRG
Sbjct: 243 SLLTIEVGTAEETFDALRKIVDQSEEGLEGVRELEEMQAIF-AENDTQNRIKIDPSVVRG 301

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           LEYYTG V+EA L F V+N+  + VVFGSVGGGGRYDGLV+RF+G+N+PATGFSIG+SRL
Sbjct: 302 LEYYTGPVFEAALLFDVLNDDGQKVVFGSVGGGGRYDGLVARFRGENIPATGFSIGVSRL 361

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I AL++L       K    V++  MD + + +++YQ     LR+AGI AE++LG+S    
Sbjct: 362 IAALQNLGKLPVKEKTGP-VVVLMMDKEPEIVARYQKMVMQLRSAGIPAELYLGASG-MK 419

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            Q+KYADRR  P  +IQG+ ER  G +QIKDL +G  LS EIK+N++WRE+R AQ+T+  
Sbjct: 420 AQMKYADRRQAPCVVIQGSQERESGTIQIKDLVEGARLSHEIKDNQTWRESRPAQVTVDE 479

Query: 479 SELVSTVKKILQENKE 494
            +LV TV+ IL   K 
Sbjct: 480 EQLVKTVQDILAAQKR 495


>gi|49474602|ref|YP_032644.1| histidyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81695994|sp|Q6FYU5|SYH_BARQU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|49240106|emb|CAF26550.1| Histidyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 498

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 274/495 (55%), Positives = 357/495 (72%), Gaps = 6/495 (1%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ K +A LPRGF D  + ++     ++  IR +YE YGF+ +ETP+ EY+D LGKFLP
Sbjct: 3   SKQEKTKARLPRGFIDRTSAQLYATETMIAQIREVYELYGFEALETPIFEYTDVLGKFLP 62

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           DEDRPN GVFSLQD+D QW+SLRYDLTAPLARY AENF+ +  P R+YR+G VFRNEK G
Sbjct: 63  DEDRPNAGVFSLQDEDEQWMSLRYDLTAPLARYFAENFEILPKPYRSYRLGFVFRNEKPG 122

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAE+CMM AD+LE +G + +DY I +NNRKIL+ +LE+
Sbjct: 123 PGRFRQFMQFDADIVGTPTVAADAEICMMAADSLEKLGFQHHDYVIRLNNRKILEAVLEQ 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL G +K  +RL VLRAIDKLDKFGL+GV+LLLG+GR D SGDFTKGA L  ++ID ++
Sbjct: 183 IGLVGREKAEKRLTVLRAIDKLDKFGLEGVRLLLGKGRLDESGDFTKGAQLKDQEIDSVL 242

Query: 242 SFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + L+ +    E+++  L  +V   I G +G  EL  +  +   +GY  NRIKI  ++VRG
Sbjct: 243 ALLTGEAETAEETLDALRHVVGHHIQGLEGVRELEEMQAIFAANGY-QNRIKIDPSVVRG 301

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           LEYYTG V+EA L F V+N+  + VVFGS+GGGGRYDGLV+RF+G+NVPATGFSIGISRL
Sbjct: 302 LEYYTGPVFEATLLFDVLNDDGQKVVFGSIGGGGRYDGLVARFRGENVPATGFSIGISRL 361

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I AL++L       K  GPV++  MD + +++++YQ     LR AGIRAE++LG+S    
Sbjct: 362 ITALQNLSKLPVK-KTPGPVVVLMMDREPEAVAQYQKMVMQLRKAGIRAELYLGASG-IK 419

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            Q+KYADRR  P  +IQG+ ER    +QIKDL +G  LSREIK+N++WRE+R AQIT+  
Sbjct: 420 AQMKYADRRQAPCVVIQGSQERQDRKIQIKDLIEGTRLSREIKDNQTWRESRPAQITVDE 479

Query: 479 SELVSTVKKILQENK 493
             LV  V+ IL    
Sbjct: 480 ERLVQAVQDILISQN 494


>gi|307941735|ref|ZP_07657090.1| histidyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307775343|gb|EFO34549.1| histidyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 551

 Score =  351 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 291/546 (53%), Positives = 358/546 (65%), Gaps = 53/546 (9%)

Query: 1   MGKK-TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M KK  KL+A LPRGF D    +IR  + ++  IR +YE YGFDP+ETP  EY+D LGKF
Sbjct: 1   MAKKPNKLKARLPRGFVDRSADDIRAADEMIGKIRAVYEQYGFDPVETPAFEYTDCLGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN GVFS+QDDD QW+SLRYDLTAPLAR+V+EN + I  P RTYR G VFRNEK
Sbjct: 61  LPDTDRPNAGVFSVQDDDEQWMSLRYDLTAPLARHVSENINEIQLPYRTYRAGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+    ADAEMCMMMADT+EA+GI R  Y I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPGVQADAEMCMMMADTMEALGIPRGQYVIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E IGL G++    RL VLRAIDKLDKFG +GV+LLLG+GR D+SGDFTKGA L  +  +I
Sbjct: 181 EAIGLGGEENAERRLTVLRAIDKLDKFGPEGVRLLLGDGRKDDSGDFTKGAGLDDDTANI 240

Query: 240 MVS-------------FLSIDLE-----------KSMHELYELVKG-------------- 261
           +V              + S D             + + E    +                
Sbjct: 241 LVETIAFEEEVEPQIGYDSWDCPNPYYMPPSEWSEDLRESKPRIGEINRANSPRDTHPFW 300

Query: 262 ------------TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                                EL +I +L+ +SGY S+RIKI  ++VRGLEYYTG VYEA
Sbjct: 301 NYLGTLAAFYELNSTTISALAELELIVDLIIESGY-SDRIKIDPSVVRGLEYYTGPVYEA 359

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            L F V NEK   V FGSVGGGGRYDGLV RF G++VPATGFSIG+SRL+ ALK+L    
Sbjct: 360 ELLFDVTNEKGDVVQFGSVGGGGRYDGLVKRFTGRDVPATGFSIGVSRLMTALKNLGK-L 418

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
              + + PVL+T MD D+ +L +YQ   Q LR AGIRAEM+ G+ K FGNQLKYADRRNC
Sbjct: 419 QTSEVVAPVLVTVMDGDTQALGRYQKMVQELRRAGIRAEMYQGNWKKFGNQLKYADRRNC 478

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
           P+AIIQG+ E   G +Q+KDL +GK LS EI +N +WRE+R AQ+T+    LV TV+ +L
Sbjct: 479 PIAIIQGSDEFEAGEIQVKDLIEGKRLSEEITDNVTWRESRPAQMTVKRDALVETVRALL 538

Query: 490 QENKEE 495
               ++
Sbjct: 539 DSQADD 544


>gi|260432609|ref|ZP_05786580.1| histidyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416437|gb|EEX09696.1| histidyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 495

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 236/502 (47%), Positives = 324/502 (64%), Gaps = 18/502 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A  P+GF D   +E+  R  +L +I ++Y  YGFD +E+  +E  ++LG
Sbjct: 1   MAKPKKQPRPKAVTPKGFRDYFGQEVTQRTEMLRTIADVYHRYGFDALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ--DDDGQ--WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
           KFLPD DRPN+GVF+ Q  D+ G   W++LRYDLTAPLAR  A++ + +  P R Y +GP
Sbjct: 61  KFLPDVDRPNEGVFAWQEIDEGGNGDWMALRYDLTAPLARVYAQHRNDLPTPYRRYAMGP 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+RNEK GPGR+RQF QCD D VGS++  ADAE+C M++DTLE VGI R DY + +NNRK
Sbjct: 121 VWRNEKPGPGRYRQFYQCDADTVGSASMAADAEICAMLSDTLETVGIPRGDYLVRVNNRK 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L+G+LE +GL  D    + +  LR IDK DK G QGV+ LL +GR D SG F  G  L+
Sbjct: 181 VLNGVLEAMGLGEDAAARDDV--LRTIDKFDKVGEQGVRELLTKGRLDASGAFIDGVGLS 238

Query: 234 SEQIDIMVSFLS---IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            +Q + +++FL+    D   ++  L   V  +  G +G +EL  I EL+   GY ++RI+
Sbjct: 239 DDQAEPVIAFLTSKADDAAGTLANLRAAVGDSKIGAEGISELEQIGELLAVGGYGADRIQ 298

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I  ++VRGL YYTG VYEA L F + +EK +   FGSV GGGRYD LV RF GQ VPATG
Sbjct: 299 IDPSVVRGLGYYTGPVYEAELTFEIFDEKGRKRQFGSVSGGGRYDDLVKRFTGQEVPATG 358

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL+         K      +     D D ++ YQ     LR AGIRAE++
Sbjct: 359 VSIGVDRLLAALREKGRI----KSHDTGPVVVTVMDRDRMADYQAMVAELRNAGIRAEVY 414

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD+RN P+A+I+G  E+ RG++QIKDL  G +++ E    E W+E R
Sbjct: 415 LGNPKNFGNQLKYADKRNSPVAVIEGGDEKDRGVVQIKDLILGAKIA-ESATLEEWKE-R 472

Query: 471 VAQITIPISELVSTVKKILQEN 492
            +Q  +P ++LV+ V++IL   
Sbjct: 473 PSQFEVPRADLVAKVREILDSQ 494


>gi|163850982|ref|YP_001639025.1| histidyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163662587|gb|ABY29954.1| histidyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 503

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 256/504 (50%), Positives = 333/504 (66%), Gaps = 15/504 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L+  LPRGF D    +I  + R+LD+IR  +E YGF+ +ETP +EY++SLGKFL
Sbjct: 1   MAKADTLKPRLPRGFPDRTEADILAQGRMLDTIRQTFELYGFEALETPFVEYTESLGKFL 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           PD DRPN+GVFS QDDD QW+SLRYDLTAPLAR+VAENFD I  P R+YR G VFRNEK 
Sbjct: 61  PDLDRPNEGVFSFQDDDEQWLSLRYDLTAPLARHVAENFDAIPKPYRSYRAGYVFRNEKP 120

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           GPGRFRQF+Q D D VG+ +  ADAE CM+MADTLE +G+    Y + +NNRK+LDG++E
Sbjct: 121 GPGRFRQFMQFDADIVGAGSVAADAETCMLMADTLERLGL-AGQYVVKVNNRKVLDGVME 179

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            IGL G DK  +RL VLRAIDKLD+ G  GV+LLLG GR D SGDFTKGA L  + I+ +
Sbjct: 180 AIGLAGPDKAGQRLTVLRAIDKLDRLGADGVRLLLGPGRKDESGDFTKGAGLGDDAIERI 239

Query: 241 VSFLSID------------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           ++++  +             EK      E+V  +  G +G  EL  I  L   +GY  +R
Sbjct: 240 LAYVGFEASPHEGADRMAFWEKFFGSWQEVVGTSETGREGIAELHAIMRLCEAAGYGHDR 299

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           ++   ++VRGLEYYTG VYEA L FPV NE  + V FGSV GGGRYDGLV RF+ + VPA
Sbjct: 300 VRADPSVVRGLEYYTGPVYEAELTFPVTNEDGQTVRFGSVAGGGRYDGLVGRFRSEPVPA 359

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           TGFSIG+SRL  AL+ L  S        P  +  +  D +++++YQ     LR   IRAE
Sbjct: 360 TGFSIGVSRLFSALR-LTKSPLVEGAAKPGPVVVLVLDRENIAEYQALVAQLRAENIRAE 418

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++LG++     Q+KYADRR  P  +IQG+ ER  G +QIKDL  G   +  I +N  W+ 
Sbjct: 419 LYLGAAG-MKAQMKYADRRRAPAVVIQGSNEREAGEVQIKDLIAGARAAEAIASNAEWKA 477

Query: 469 ARVAQITIPISELVSTVKKILQEN 492
           AR AQ+++P+  +V TV++ L  +
Sbjct: 478 ARPAQVSVPVERMVETVRETLARH 501


>gi|56695572|ref|YP_165922.1| histidyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81676408|sp|Q5LVN3|SYH_SILPO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|56677309|gb|AAV93975.1| histidyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 495

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 234/503 (46%), Positives = 317/503 (63%), Gaps = 19/503 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +AE P+GF D    E+  R  +L  I  +Y  YGF+ +E+  +E  ++LG
Sbjct: 1   MAKPKKTPRPKAETPKGFRDYFGAEVTQRTEMLRDIAGVYHRYGFEALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
           KFLPD DRPN+GVF+ Q    D  G W++LRYDLTAPLAR  A++ + +  P R Y +GP
Sbjct: 61  KFLPDVDRPNEGVFAWQESEDDGAGDWMALRYDLTAPLARVYAQHRNDLPTPYRRYAMGP 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+RNEK GPGR+RQF QCD D VGS++  ADAE+C M++DTLE VGI R DY + +NNRK
Sbjct: 121 VWRNEKPGPGRYRQFYQCDADTVGSASMAADAEICAMLSDTLETVGIPRGDYVVRVNNRK 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L+G+LE +GL  +    +R  VLR IDK DK G  GV+ LLG+GR D SG F  G  L+
Sbjct: 181 VLNGVLETMGLADE---GQRDAVLRTIDKFDKVGEDGVRELLGKGRLDASGAFIDGVGLS 237

Query: 234 SEQIDIMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            +Q   +++FL     D   ++  L   V  +  G +G +EL  I +L+   GY  +RI 
Sbjct: 238 DDQAGPVLAFLTSRGADAATTVANLRAAVGASQIGVQGIDELEQIGDLLAAGGYGPDRIV 297

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I  ++VRGL YYTG VYEA L F + +EK +   FGSV GGGRYD LV RF GQ VPATG
Sbjct: 298 IDPSVVRGLGYYTGPVYEAELTFEIFDEKGRKRQFGSVSGGGRYDDLVKRFTGQEVPATG 357

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL+         +      +     D D ++ YQ     LR AGIRAE++
Sbjct: 358 VSIGVDRLLAALREKGRI----RTAERGPVVVTVMDRDRMADYQAMVAELRNAGIRAEVY 413

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD+RN P+A+I+G  ER+ G++QIKDL  G +++      E W+E R
Sbjct: 414 LGNPKNFGNQLKYADKRNSPVAVIEGGDERANGVVQIKDLILGAQIAAN-ATLEEWKE-R 471

Query: 471 VAQITIPISELVSTVKKILQENK 493
            +Q  +  ++LV+ V++IL E  
Sbjct: 472 PSQYEVARADLVAKVREILAEQA 494


>gi|254487078|ref|ZP_05100283.1| histidyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043947|gb|EEB84585.1| histidyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 502

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 243/508 (47%), Positives = 326/508 (64%), Gaps = 21/508 (4%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +AE P+GF D    E+  R  +L  I  +Y  YGFD +E+  +E  ++LG
Sbjct: 1   MAKPNKTPRPKAEAPKGFRDYFGAEVTQRAEMLRKIAGVYHRYGFDALESSGVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ-----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           KFLPD DRPN+GVF+ Q     D  G W++LRYDLTAPLAR  A++ + +  P R Y +G
Sbjct: 61  KFLPDVDRPNEGVFAWQEDADADKPGDWLALRYDLTAPLARVYAQHRNDLPTPYRRYAMG 120

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           PV+RNEK GPGRFRQF QCD D VG+ +  ADAE+C M+AD LE VGI+R DY + +NNR
Sbjct: 121 PVWRNEKPGPGRFRQFYQCDADTVGAPSVAADAEICAMLADCLEEVGIERGDYIVRVNNR 180

Query: 173 KILDGILEKI----GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           K+L+G++E          D   +ER IVLRAIDKLD+ GL GV+ LLG GR D+SGDFT 
Sbjct: 181 KVLNGVMEVAGVLDPTDPDKFASERGIVLRAIDKLDRLGLDGVRALLGAGRKDDSGDFTD 240

Query: 229 GANLTSEQIDIMVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
           GA LT  Q D+++ F+        +++  L ELV G+  G +G +EL  I++L+   GY 
Sbjct: 241 GAGLTDAQADVVMGFMQAKRDTGAETVARLRELVAGSSTGVQGVDELETIADLMAAGGYG 300

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
            +R++I  ++VRGL YYTG V+EA L F + +EK +   FGSV GGGRYD LV RF GQ 
Sbjct: 301 PDRVEIDPSVVRGLGYYTGPVFEAELTFEIKDEKGRVRNFGSVAGGGRYDDLVKRFTGQE 360

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           VPATG SIG+ RL+ AL +    T +        +     D   ++ YQ     LR AGI
Sbjct: 361 VPATGVSIGVDRLLAALHAKGRLTGD----AIGPVVVTVMDKARMADYQAMVAELRQAGI 416

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           RAE++LG+ KNFGNQLKYADRRN P+A+I G  E   GM+QIKDL  G +++ E    E 
Sbjct: 417 RAEVYLGNPKNFGNQLKYADRRNSPVAVIAGGDEFDNGMVQIKDLILGAKIA-ENATLEE 475

Query: 466 WREARVAQITIPISELVSTVKKILQENK 493
           W+  R +Q  +P ++LV+ V++IL+ N+
Sbjct: 476 WK-DRPSQYEVPRADLVAKVREILELNR 502


>gi|218529809|ref|YP_002420625.1| histidyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|240138113|ref|YP_002962585.1| histidyl-tRNA synthetase [Methylobacterium extorquens AM1]
 gi|218522112|gb|ACK82697.1| histidyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|240008082|gb|ACS39308.1| histidyl-tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 503

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 255/504 (50%), Positives = 332/504 (65%), Gaps = 15/504 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L+  LPRGF D    +I  + R+LD+IR  +E YGF+ +ETP +EY++SLGKFL
Sbjct: 1   MAKADTLKPRLPRGFPDRTEADILAQGRMLDTIRQTFELYGFEALETPFVEYTESLGKFL 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           PD DRPN+GVFS QDDD QW+SLRYDLTAPLAR+VAENFD I  P R+YR G VFRNEK 
Sbjct: 61  PDLDRPNEGVFSFQDDDEQWLSLRYDLTAPLARHVAENFDAIPKPYRSYRAGYVFRNEKP 120

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           GPGRFRQF+Q D D VG+ +  ADAE CM+MADTLE +G+    Y + +NNRK+LDG++E
Sbjct: 121 GPGRFRQFMQFDADIVGAGSVAADAETCMLMADTLERLGL-AGQYVVKVNNRKVLDGVME 179

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            IGL G DK  +RL VLRAIDKLD+ G  GV+LLLG GR D SGDFTKGA L  + I+ +
Sbjct: 180 AIGLAGPDKAGQRLTVLRAIDKLDRLGADGVRLLLGPGRKDESGDFTKGAGLGDDAIERI 239

Query: 241 VSFLSID------------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           ++++  +             EK      E+V  +  G +G  EL  I  L   +GY  +R
Sbjct: 240 LAYVGFEASPHEGADRMAFWEKFFGSWQEVVGTSETGREGIAELHAIMRLCEAAGYGHDR 299

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           ++   ++VRGLEYYTG VYEA L FPV NE  + V FGSV GGGRYDGLV RF+ + VPA
Sbjct: 300 VRADPSVVRGLEYYTGPVYEAELTFPVTNEDGQTVRFGSVAGGGRYDGLVGRFRSEPVPA 359

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           TGFSIG+SRL  AL+ L  S        P  +  +  D +++++YQ     LR   IRAE
Sbjct: 360 TGFSIGVSRLFSALR-LTKSPLVEGAAKPGPVVVLVLDRENIAEYQALVAQLRAENIRAE 418

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++LG++     Q+KYADRR  P  +IQG+ ER  G +QIKDL  G   +  I +N  W+ 
Sbjct: 419 LYLGAAG-MKAQMKYADRRRAPAVVIQGSNEREAGEVQIKDLIAGARAAEAIASNAEWKA 477

Query: 469 ARVAQITIPISELVSTVKKILQEN 492
           AR AQ+++P+  +V  V++ L  +
Sbjct: 478 ARPAQVSVPVERMVEAVRETLARH 501


>gi|260462672|ref|ZP_05810878.1| histidyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259031578|gb|EEW32848.1| histidyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 500

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 274/500 (54%), Positives = 350/500 (70%), Gaps = 11/500 (2%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K +A LPRGFAD   ++IR   +++ +IR++YE YGF+P + PL+EY+D+LGKF
Sbjct: 1   MADKSEKTKARLPRGFADRSAEDIRAVEKMMATIRSVYELYGFEPADQPLIEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAP AR+VAEN++ +  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPTARFVAENYERLPKPYRSYRSGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D +G+    ADAEM MMMAD +EA+GIKR DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTIGTPGVAADAEMAMMMADVMEALGIKRGDYVIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSE 235
           E IGL GDD    RL VLRAIDKLDK G +GV+LLLG GR D      GDF KGA L + 
Sbjct: 181 EAIGLGGDDNAGRRLTVLRAIDKLDKLGPEGVRLLLGPGRWDGGKEGEGDFAKGAGLDNA 240

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           Q + ++   + + +         V      ++G  EL +I  LVR +GY  +RI +  ++
Sbjct: 241 QSEAVLLATARNAQG----QDASVSANSVYQEGVGELSIIEALVRAAGYGEDRIAMDRSV 296

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGLEYYTG V+EA L   + NE  + V FGSVGGGGRYDGLVSRF+G+ VPATGFSIG+
Sbjct: 297 VRGLEYYTGPVFEAELLAEIPNEDGQIVRFGSVGGGGRYDGLVSRFRGEPVPATGFSIGV 356

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           SRL+ ALK+L    ++   + PV++  MD D+DSL +YQ     LR AGIR+EM+LG   
Sbjct: 357 SRLMTALKNLGK-LDSADVIAPVVVLVMDKDTDSLGRYQKMVSELRAAGIRSEMYLG-GA 414

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               QLKYADRR CP+AIIQG  ER++G LQIKDL +G  +S EI +N  WR AR AQ+T
Sbjct: 415 GMKAQLKYADRRGCPVAIIQGGDERAKGELQIKDLIEGARMSAEITDNAEWRAARPAQVT 474

Query: 476 IPISELVSTVKKILQENKEE 495
           +  SELV+ V++IL     +
Sbjct: 475 VAESELVTEVRRILAAQAAD 494


>gi|323135710|ref|ZP_08070793.1| histidyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322398801|gb|EFY01320.1| histidyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 500

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 271/499 (54%), Positives = 344/499 (68%), Gaps = 8/499 (1%)

Query: 1   MGK---KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K   KTK+ A  PRGFAD    E+   +R+LD IR++YE YGF+ +ETP  EY+D+LG
Sbjct: 1   MSKEEAKTKVEARAPRGFADREAGELAATSRMLDVIRSVYELYGFEALETPAFEYTDALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD+DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VA+NFD +  P R+YR+G V+RN
Sbjct: 61  KFLPDQDRPNEGVFSLQDDDEQWLSLRYDLTAPLARFVAQNFDRLPKPYRSYRLGHVYRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF+Q D D VGS++  ADAE+CMM AD LE +GI R DY I IN+RK+LDG
Sbjct: 121 EKPGPGRFRQFMQFDADTVGSASPAADAEICMMAADALEKLGIARGDYVIKINSRKVLDG 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +++ IG+ G++    RL+VLRAIDKLD+ G  GV+ LLGEGR D SGDFTKGA L  E I
Sbjct: 181 VMQAIGVGGEENAGRRLVVLRAIDKLDRLGPDGVRQLLGEGRKDESGDFTKGAGLPLEAI 240

Query: 238 DIMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           D ++SF         K   +L+ L+  +  G +G  EL+ I +L R +G+  +RI+I  +
Sbjct: 241 DTILSFSLGGQYRDGKPQFDLFGLLGKSDIGAQGAEELLEIEDLARDAGFGPDRIRIDPS 300

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGLEYYTG V+EA L F   +EK  PV FGSVGGGGRYDGLV RF+ +N PATGFSIG
Sbjct: 301 VVRGLEYYTGPVFEADLTFETRDEKGHPVRFGSVGGGGRYDGLVGRFRPENTPATGFSIG 360

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           +SRL  ALK L  S           +  +  D D L+ YQ     LR  GI AE++LG++
Sbjct: 361 VSRLFAALK-LVGSPIVTARPHVGPVVVLVLDRDRLADYQRMVGQLRQGGIAAELYLGAA 419

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                Q+KYADRRN PL +IQG+ E+++G +QIKDL  G   +  I  NE W+ AR AQI
Sbjct: 420 G-MKAQMKYADRRNSPLVVIQGSDEKAKGEVQIKDLVAGARAAAAIATNEEWKAARPAQI 478

Query: 475 TIPISELVSTVKKILQENK 493
           +IP SELV  V + L   K
Sbjct: 479 SIPESELVERVAQALAAQK 497


>gi|154245164|ref|YP_001416122.1| histidyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154159249|gb|ABS66465.1| histidyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 509

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 261/504 (51%), Positives = 339/504 (67%), Gaps = 14/504 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+ K +A LPRG  D    E+     +L+ IR +YE YGF+ +ETP  EY+D+LGKFL
Sbjct: 1   MAKEFKPKARLPRGLVDRTGAELSATRAMLEKIRAVYELYGFEALETPAFEYTDALGKFL 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           PD DRPN+GVFSL+DDD QW+SLRYDLTAPLARYVAE+F+ +  P R+YR G VFRNEK 
Sbjct: 61  PDLDRPNEGVFSLKDDDEQWLSLRYDLTAPLARYVAEHFEQLPKPYRSYRAGYVFRNEKP 120

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           GPGRFRQF+Q D D VG+ +  ADAE+CMM ADTLEAVG+ R  Y + +NNRK+LDG++E
Sbjct: 121 GPGRFRQFMQFDADTVGAPSVAADAEICMMAADTLEAVGVPRGAYVVRVNNRKVLDGVME 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            IGL GD+    RL VLRAIDK DKFG++GV+LLLG GR D SGDFTKGA L   Q  ++
Sbjct: 181 AIGLGGDENFGRRLTVLRAIDKFDKFGVEGVELLLGPGRRDESGDFTKGAGLDQRQSAVV 240

Query: 241 VSFLSIDLEKSMH-----------ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           ++ L+    ++             EL   +    A  +G  EL  I+ LV  +GY  +R+
Sbjct: 241 LAMLTGKGLRATDVGVEVELDGDVELAAALASNSAFLEGMAELRDIAALVAAAGY-QDRV 299

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           KI  ++VRGLEYYTG VYEA L F + +E+ +PV FGSV GGGRYDGLV+RF+G+ VPAT
Sbjct: 300 KIDPSVVRGLEYYTGPVYEAELTFEIKDEEGRPVRFGSVAGGGRYDGLVARFRGEKVPAT 359

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GFSIG+SRL+ AL  L        E+GPV++  MD +   L+ Y      LR  GIRAEM
Sbjct: 360 GFSIGVSRLLAALAFLGKMEA-APEVGPVVVLVMDKEPHRLADYMKMVADLRANGIRAEM 418

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +LG       Q+KYADRR  P  IIQG+ E+S G +QIKDL +G +++  I +N  +R A
Sbjct: 419 YLGGGG-MKPQMKYADRRGAPAVIIQGSNEKSAGEVQIKDLVEGAKIAASIADNAEYRAA 477

Query: 470 RVAQITIPISELVSTVKKILQENK 493
           R AQ  +   +LV+ ++ +L+   
Sbjct: 478 RPAQFAVKEEDLVTAIRDVLERRA 501


>gi|89053436|ref|YP_508887.1| histidyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|123094358|sp|Q28TV0|SYH_JANSC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|88862985|gb|ABD53862.1| histidyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 505

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 248/511 (48%), Positives = 334/511 (65%), Gaps = 24/511 (4%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K+ K    +AE P+GF D    E+  R  +L  I  +Y  YGFDP+ET  +E  ++LG
Sbjct: 1   MAKQKKQPRPKAETPKGFRDYFGAEVVERQTMLRKIGEVYHRYGFDPLETSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDG----QWISLRYDLTAPLARYVAENF--------DTIVFP 105
           KFLPD DRPN+GVF+ Q+D G    +W++LRYD+TAPLAR  A+          D++  P
Sbjct: 61  KFLPDVDRPNEGVFAFQEDGGSDDGKWLALRYDMTAPLARVAAQFRERPLPGQEDSLPSP 120

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
            R Y +GPV+RNEK GPGRFRQF QCD D VG+ +  ADAE+C M+AD LEAVGI+R DY
Sbjct: 121 YRRYTMGPVWRNEKPGPGRFRQFYQCDADTVGAPSVAADAEICAMLADCLEAVGIERGDY 180

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            + +NNRK+L+G++E  GL GDDK   R IVLRAIDK+D+ G  GV+ LLG+GR D SGD
Sbjct: 181 VVRVNNRKVLNGVMEVAGLAGDDKEAARGIVLRAIDKMDRLGAGGVRDLLGDGRKDESGD 240

Query: 226 FTKGANLTSEQIDIMVSFLSI---DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           FTKGA ++S   D +++F+     D   ++  L  L +G+  G +G +EL  I+ L+   
Sbjct: 241 FTKGAGISSANADKILAFVQATAGDNAATVSNLKSLTEGSDIGTQGVSELEQIASLLAAQ 300

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           GY  +RI I  ++VRGL YYTG VYEA L F V NEK + V FGSV GGGRYD LV RF 
Sbjct: 301 GYGPDRIIIDPSVVRGLGYYTGPVYEAELTFDVQNEKGQTVQFGSVAGGGRYDDLVKRFT 360

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
           GQ VPATG SIG+ RL+ AL +               +     D D +++YQ     LR 
Sbjct: 361 GQEVPATGVSIGVDRLLAALHATGKLKGE----DAGPVIVTVMDRDRMAEYQAMVATLRN 416

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE++LG+ KNFGNQLKYAD+R  P+AIIQG+ E +RG++Q+KDL  G +L+ +   
Sbjct: 417 AGIRAEVYLGNPKNFGNQLKYADKRRSPVAIIQGSDEAARGVVQLKDLILGAKLAED-AT 475

Query: 463 NESWREARVAQITIPISELVSTVKKILQENK 493
            E W+ ++ AQ  + +++LV+ V+ I+  +K
Sbjct: 476 LEEWK-SQPAQTEVAVADLVAEVQAIIARHK 505


>gi|110681188|ref|YP_684195.1| histidyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123172012|sp|Q160T4|SYH_ROSDO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|109457304|gb|ABG33509.1| histidyl-tRNA synthetase, putative [Roseobacter denitrificans OCh
           114]
          Length = 519

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 241/522 (46%), Positives = 324/522 (62%), Gaps = 35/522 (6%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A+ P+GF D    E+  R  +L  I  +Y  YGFD +E+  +E  ++LG
Sbjct: 1   MAKPKKTPRPKAQTPKGFRDYFGAEVSQRAEMLQRIAGVYHRYGFDALESSGVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ-----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           KFLPD DRPN+GVF+ Q     D  G W++LRYDLTAPLAR  A++ + +  P R Y +G
Sbjct: 61  KFLPDVDRPNEGVFAWQEDADADKPGDWLALRYDLTAPLARVYAQHQNDLPKPYRRYAMG 120

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           PV+RNEK GPGRFRQF QCD D VG+S+  ADAE+C M+ D LEAVGI+R DY + INNR
Sbjct: 121 PVWRNEKPGPGRFRQFYQCDADTVGASSVAADAEICAMLCDCLEAVGIERGDYVVRINNR 180

Query: 173 KILDGILEKIGLHGDDKLNERLIV------------------LRAIDKLDKFGLQGVKLL 214
           K+L+G+LE IG  GD+    +                     LR IDKLD+ G +GV+ L
Sbjct: 181 KVLNGVLEVIGALGDEPRLSQHFQEMAENLGKKMTAAKVGIVLRTIDKLDRLGKEGVRSL 240

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL---EKSMHELYELVKGTIAGEKGFNE 271
           LG GR D SGD T GA+L+  QID+++SFL        +++  L E+V  +  G++G +E
Sbjct: 241 LGPGRKDESGDLTFGADLSKAQIDVVMSFLEAKGGTNSETLINLREIVGRSRIGKEGVDE 300

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L  ISEL+    Y  +RI I  ++VRGL YYTG VYEA L F + ++K +   FGSV GG
Sbjct: 301 LEKISELLSAGSYGPDRIVIDPSVVRGLGYYTGPVYEAELTFEIQDDKGRTRNFGSVAGG 360

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           GRYD LV RF GQ VPATG SIG+ RL+ AL +               +     D D ++
Sbjct: 361 GRYDDLVKRFTGQEVPATGVSIGVDRLLAALHAKGRL----DTTDVGPVVVTVMDRDRMA 416

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
            YQ     LR AGIRAE++LG+ KNFGNQLKYAD RN P+A+I+G  E  +G++QIKDL 
Sbjct: 417 DYQAMVAELRQAGIRAEVYLGNPKNFGNQLKYADTRNSPVAVIEGGDEHEKGVVQIKDLI 476

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            G E+++     E W+  R +Q  +P +ELV+ V++IL ++ 
Sbjct: 477 LGAEIAKS-ATLEEWK-DRPSQFEVPRAELVAKVREILAQHG 516


>gi|294676352|ref|YP_003576967.1| histidyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294475172|gb|ADE84560.1| histidyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 499

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 239/497 (48%), Positives = 323/497 (64%), Gaps = 13/497 (2%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  + +AE P+GF D    E+  R  +L +I  +Y  +GFDP+ET  +E  ++LGKFLP
Sbjct: 5   KKPRRPKAETPKGFRDYFGAEVTERAAMLSTIAEVYRAHGFDPLETSAVETVEALGKFLP 64

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVF+ QD+ G W++LRYD+TAPLAR  A+  + +  P R Y +GPV+RNEK G
Sbjct: 65  DVDRPNEGVFAWQDEGGDWLALRYDMTAPLARVAAQFRNDLPSPYRRYTMGPVWRNEKPG 124

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF QCD D VG+++  ADAE+C M++D LEAVGI R DY + +NNRK+L+G++E 
Sbjct: 125 PGRFRQFYQCDADTVGAASVAADAEICGMLSDALEAVGIDRGDYVVRVNNRKVLNGVMEV 184

Query: 182 IGL----HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            G+      D    ER IVLRAIDK DKFG  GV+ L+G+GR D SGDFTKGA L+  Q 
Sbjct: 185 AGVLDPSDPDRFAEERGIVLRAIDKFDKFGEAGVRALMGKGRLDESGDFTKGAGLSDAQA 244

Query: 238 DIMVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           D+++ F+         +   L ELV G+  G  G +EL  I++++   GY  +RI I  +
Sbjct: 245 DVVMGFMEAKRDTGAATAARLRELVSGSALGAAGVDELEFIAQILDGQGYGPDRIVIDPS 304

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL YYTG V+EA L F +++EK +   FGSV GGGRYD LV RF GQ VPATG SIG
Sbjct: 305 VVRGLGYYTGPVFEAELTFEILDEKGRKRSFGSVAGGGRYDDLVKRFTGQEVPATGVSIG 364

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL+ AL++               +     D D +  Y      LR AGIRAE++LG+ 
Sbjct: 365 VDRLLAALRAKGRIGG----AAQGPVVVTVMDRDRMGDYLAMAATLRRAGIRAEVYLGNP 420

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           KNFGNQLKYAD+R  P+AIIQG  E +RG++QIKDL  G +++    + E W+ A+ AQ 
Sbjct: 421 KNFGNQLKYADKRESPVAIIQGADEAARGVVQIKDLILGAKIAAS-ASVEEWK-AQPAQF 478

Query: 475 TIPISELVSTVKKILQE 491
            IP  E+V+ V+++L  
Sbjct: 479 EIPTGEMVAKVQEVLAR 495


>gi|254560675|ref|YP_003067770.1| histidyl-tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254267953|emb|CAX23821.1| histidyl-tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 503

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 254/504 (50%), Positives = 332/504 (65%), Gaps = 15/504 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L+  LPRGF D    +I  + R+LD+IR  +E YGF+ +ETP +EY++SLGKFL
Sbjct: 1   MAKADTLKPRLPRGFPDRTEADILAQGRMLDTIRQTFELYGFEALETPFVEYTESLGKFL 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           PD DRPN+GVFS QDDD QW+SLRYDLTAPLAR+VAE FD I  P R+YR G VFRNEK 
Sbjct: 61  PDLDRPNEGVFSFQDDDEQWLSLRYDLTAPLARHVAEKFDAIPKPYRSYRAGYVFRNEKP 120

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           GPGRFRQF+Q D D VG+ +  ADAE CM+MADTLE +G+    Y + +NNRK+LDG++E
Sbjct: 121 GPGRFRQFMQFDADIVGAGSVAADAETCMLMADTLERLGL-AGQYVVKVNNRKVLDGVME 179

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            IGL G DK  +RL VLRAIDKLD+ G  GV+LLLG GR D SGDFTKGA L  + I+ +
Sbjct: 180 AIGLAGPDKAGQRLTVLRAIDKLDRLGADGVRLLLGPGRKDESGDFTKGAGLGDDAIERI 239

Query: 241 VSFLSID------------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           ++++  +             EK      E+V  +  G +G  EL  I  L   +GY  +R
Sbjct: 240 LAYVGFEASPHEGADRMAFWEKFFGSWQEVVGTSETGREGIAELHAIMRLCEAAGYGHDR 299

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           ++   ++VRGLEYYTG VYEA L FPV NE  + V FGSV GGGRYDGLV RF+ + VPA
Sbjct: 300 VRADPSVVRGLEYYTGPVYEAELTFPVTNEDGQTVRFGSVAGGGRYDGLVGRFRSEPVPA 359

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           TGFSIG+SRL  AL+ L  S        P  +  +  D +++++YQ     LR   IRAE
Sbjct: 360 TGFSIGVSRLFSALR-LTKSPLVEGAAKPGPVVVLVLDRENIAEYQALVAQLRAENIRAE 418

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++LG++    +Q+KYADRR  P  +IQG+ ER  G +QIKDL  G   +  I +N  W+ 
Sbjct: 419 LYLGAAG-MKSQMKYADRRRAPAVVIQGSNEREAGEVQIKDLIAGARAAEAIASNAEWKA 477

Query: 469 ARVAQITIPISELVSTVKKILQEN 492
           AR AQ+++P+  +V  V++ L  +
Sbjct: 478 ARPAQVSVPVERMVEAVRETLARH 501


>gi|99080344|ref|YP_612498.1| histidyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123252568|sp|Q1GJD0|SYH_SILST RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|99036624|gb|ABF63236.1| histidyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 500

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 235/505 (46%), Positives = 323/505 (63%), Gaps = 18/505 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A  P+GF D   +E+  R  +L +I  +Y +YGF+ +E+  +E  ++LG
Sbjct: 1   MAKAKKQPRPKAITPKGFRDYFGEEVTQRTHMLATIAEVYHHYGFEALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
           KFLPD DRPN+GVF+ Q    D  G W++LRYDLTAPLAR  A++ + +  P R Y +GP
Sbjct: 61  KFLPDVDRPNEGVFAWQEAEDDGKGDWMALRYDLTAPLARVYAQHRNDLPSPYRRYAMGP 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+RNEK GPGRFRQF QCD D VG+++  ADAE+CMM++DTLE VGI R DY + +NNRK
Sbjct: 121 VWRNEKPGPGRFRQFYQCDADTVGTASMAADAEICMMLSDTLEKVGIPRGDYLVRVNNRK 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L+G+LE +GL  DD   +R  VLR IDK DK G  GV+ LLG+GR D SG +  G  L 
Sbjct: 181 VLNGVLEAMGLLEDD--PKRDDVLRTIDKFDKVGESGVRELLGKGRLDASGAYIDGVGLE 238

Query: 234 SEQIDIMVSFLSIDLE---KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
             Q + +++FL+   +   ++M  L   V  +  G++G  EL ++  L   +GY  +RI 
Sbjct: 239 DHQAEPVLAFLTSKGDTVTETMTNLRAAVGDSKVGQEGIAELELMGSLFAAAGYGEDRIL 298

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I  +IVRGL YYTG V+EA L F + +EK +   FGSV GGGRYDGLV RF GQ VPA G
Sbjct: 299 IDPSIVRGLGYYTGPVFEAELTFEIFDEKGRKRQFGSVAGGGRYDGLVKRFTGQEVPAVG 358

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL+                +     D D ++ YQ     LR AGIRAE++
Sbjct: 359 LSIGVDRLLAALREKGRL----AATPTGPVVVTVMDRDRMADYQAMVAELRQAGIRAEVY 414

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD+R+ P+A+I+G  E+ RG++QIKDL  G +++ E    E W+E R
Sbjct: 415 LGNPKNFGNQLKYADKRHSPIAVIEGGDEKDRGVVQIKDLILGAKIA-ESATLEEWKE-R 472

Query: 471 VAQITIPISELVSTVKKILQENKEE 495
            +Q  +P +ELV+ V++IL     +
Sbjct: 473 PSQFEVPRTELVAKVREILVSQSSD 497


>gi|254465503|ref|ZP_05078914.1| histidyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206686411|gb|EDZ46893.1| histidyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 495

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 232/499 (46%), Positives = 323/499 (64%), Gaps = 15/499 (3%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ + +A+ P+GF D    E+  R+ +L +I  +Y +YGF+ +E+  +E  ++LGKFLP
Sbjct: 5   KKQPRPKAQTPKGFRDYFGAEVTQRSEMLRAIAGVYHHYGFEALESSAVETVEALGKFLP 64

Query: 62  DEDRPNKGVFSLQ----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           D DRPN+GVF+ Q    D +G W++LRYDLTAPLAR  A++ + +  P R Y +GPV+RN
Sbjct: 65  DVDRPNEGVFAWQETEDDGNGDWMALRYDLTAPLARVYAQHRNDLPTPYRRYAMGPVWRN 124

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VGS++  ADAE+C M++DTLE VGI R DY + +NNRK+L+G
Sbjct: 125 EKPGPGRFRQFYQCDADTVGSASMAADAEICAMLSDTLETVGITRGDYLVRVNNRKVLNG 184

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +LE +GL   D   +R  VLR IDK DK G  GV+ LL +GR D SG F  G  L+ +Q 
Sbjct: 185 VLEAMGLGDGDA--KRDDVLRTIDKFDKVGEAGVRELLTKGRLDASGAFIDGVGLSDDQA 242

Query: 238 DIMVSFLSIDLEKS---MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
             +++FL+    ++   +  L   V  +  G++G  EL  I EL+   GY  +RI+I  +
Sbjct: 243 APVLAFLTSKAAEAAGTIANLRAAVGDSKIGQEGIAELEQIGELLAAGGYGKDRIEIDPS 302

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL YYTG V+EA L F +++EK +   FGSV GGGRYDGLV RF GQ VPA G S+G
Sbjct: 303 VVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVSGGGRYDGLVKRFTGQEVPAVGVSVG 362

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL+ AL +    +          +     D D ++ YQ     LR AGIRAE++LG+ 
Sbjct: 363 VDRLLAALHAKGRLSAEATGP----VVVTVMDRDRMADYQAMVAELRNAGIRAEVYLGNP 418

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           KNFGNQLKYAD+RN P+A+I+G  E++ G++QIKDL  G +++ E    E W+E R +Q 
Sbjct: 419 KNFGNQLKYADKRNSPVAVIEGGDEKANGVVQIKDLILGAKIA-ESATLEEWKE-RPSQF 476

Query: 475 TIPISELVSTVKKILQENK 493
            +P SELV+ V +IL    
Sbjct: 477 EVPRSELVAKVLEILDGQG 495


>gi|114770396|ref|ZP_01447934.1| histidyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549233|gb|EAU52116.1| histidyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 496

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 239/504 (47%), Positives = 329/504 (65%), Gaps = 16/504 (3%)

Query: 1   MGKKTK-----LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS 55
           M K  K      +A  P+GF D    ++  RN +L  I  +Y  YGFD +ETP +E  ++
Sbjct: 1   MAKDKKKKSLRPKAIPPKGFRDYFGTDVAERNVMLSQITEVYHRYGFDALETPAVETVEA 60

Query: 56  LGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
           LGKFLPD +RPN+GVF+ QDDD  W++LRYDLTAPLAR  ++  + +  P R Y +GPV+
Sbjct: 61  LGKFLPDVERPNEGVFAWQDDDDAWMALRYDLTAPLARVYSQFRNDLPSPYRRYAMGPVW 120

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           RNEK GPGR+RQF QCD D +G+ +  ADAE+C M++DTLEAVGI R DY + +NNRK+L
Sbjct: 121 RNEKPGPGRYRQFYQCDADTIGAPSIAADAEICSMLSDTLEAVGILRGDYLVKVNNRKVL 180

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           +G+LE  G+  D    ++  VLR IDK DK G++GVK LLG GR D SG +  G  L+  
Sbjct: 181 NGVLEATGVSDD---IKKANVLRTIDKFDKVGIEGVKQLLGAGRLDASGAYIDGVGLSEM 237

Query: 236 QIDIMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
           QI  +++FL     D   ++  L   V  +  G +G +EL +I EL+   GY ++R++I 
Sbjct: 238 QIAPVLAFLTSKGFDASSTISNLRSAVGNSDIGLQGISELEMIGELMEAGGYGADRVEID 297

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            ++VRGL YYTG VYEA L F ++NEK +   FGSV GGGRYD LV RF GQ VPATG S
Sbjct: 298 PSVVRGLAYYTGPVYEAELTFEILNEKGQRRQFGSVSGGGRYDDLVKRFTGQEVPATGVS 357

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG+ RL+ AL+      N +K      +     D D L+ YQ     LR AGIRAEM++G
Sbjct: 358 IGVDRLLAALREKGRMNNLVKG----PVIVTVMDRDRLADYQQMVSELRNAGIRAEMYMG 413

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + KNFGNQLKYAD+R+ P+A+I+G  E++ G++QIKDLA G  LS +I+  E W+ ++ A
Sbjct: 414 NPKNFGNQLKYADKRSSPVAVIEGGDEKANGLVQIKDLALGARLSAKIETTEEWK-SQPA 472

Query: 473 QITIPISELVSTVKKILQENKEEI 496
           QI I    L+S V+K++  +++ +
Sbjct: 473 QIEIKRDSLISEVRKMIARSEDAM 496


>gi|163737205|ref|ZP_02144623.1| histidyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161389809|gb|EDQ14160.1| histidyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 495

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 234/499 (46%), Positives = 321/499 (64%), Gaps = 15/499 (3%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ + +A  P+GF D   +E+  R+ +L +I  +Y  YGFD +E+  +E  ++LGKFLP
Sbjct: 5   KKQPRPKAITPKGFRDYFGEEVSQRSEMLQAIAGVYHRYGFDALESSAVETVEALGKFLP 64

Query: 62  DEDRPNKGVFSLQ--DDDGQ--WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           D DRPN+GVF+ Q  D+ G   W++LRYDLTAPLAR  A++ + +  P R Y +GPV+RN
Sbjct: 65  DVDRPNEGVFAWQEYDEGGNGDWMALRYDLTAPLARVYAQHRNDLPTPYRRYAMGPVWRN 124

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGR+RQF QCD D VG+++  ADAE+C M++DTLE VGI R DY + +NNRK+L+G
Sbjct: 125 EKPGPGRYRQFYQCDADTVGTASMAADAEICAMLSDTLETVGIPRGDYLVRVNNRKVLNG 184

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +LE +GL   D   +R  VLR IDK DK G  GV+ LL +GR D SG F  G  L+ +Q 
Sbjct: 185 VLEAMGLEAGDA--KRDDVLRTIDKFDKVGEAGVRELLTKGRLDASGAFIDGVGLSDDQA 242

Query: 238 DIMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
             +++FL     D  K++  L E V  +  G +G  EL  I +L+   GY ++RI I  +
Sbjct: 243 APVLAFLTSKGADAAKTLANLSEAVGSSSIGAEGVGELEQIGDLLAAGGYGADRIDIDPS 302

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL YYTG VYEA L F +++EK +   FGSV GGGRYD LV RF GQ VPATG SIG
Sbjct: 303 VVRGLGYYTGPVYEAELTFEILDEKGRKRQFGSVSGGGRYDDLVKRFTGQEVPATGVSIG 362

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL+ AL+         K      +     D   ++ YQ     LR AGIRAE++LG+ 
Sbjct: 363 VDRLLAALREKGRI----KAEATGPVVVTVMDKARMADYQAMVAELRNAGIRAEVYLGNP 418

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           KNFGNQLKYAD+RN P+A+I+G  E+ RG++QIKDL  G +++ E    E W+E R +Q 
Sbjct: 419 KNFGNQLKYADKRNSPIAVIEGGEEKDRGVVQIKDLILGAQIA-ENATLEEWKE-RPSQF 476

Query: 475 TIPISELVSTVKKILQENK 493
            +P  +LV+ V++IL    
Sbjct: 477 EVPRGDLVAKVREILAGQG 495


>gi|83954742|ref|ZP_00963453.1| histidyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841026|gb|EAP80197.1| histidyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 502

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 242/508 (47%), Positives = 327/508 (64%), Gaps = 21/508 (4%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +AE P+GF D    E+  R  +L  I  +Y  YGFD +E+  +E   +LG
Sbjct: 1   MAKPKKTPRPKAETPKGFRDYFGAEVTQRAEMLHKIAQVYHRYGFDALESSGVETVQALG 60

Query: 58  KFLPDEDRPNKGVFSLQ-----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           KFLPD DRPN+GVF+ Q     D  G W++LRYDLTAPLAR  A++ + +  P R Y +G
Sbjct: 61  KFLPDVDRPNEGVFAWQEDAEADKPGDWLALRYDLTAPLARVYAQHRNDLPTPYRRYAMG 120

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           PV+RNEK GPGRFRQF QCD D VG+ +  ADAE+C M+AD LE VGI R DY + +NNR
Sbjct: 121 PVWRNEKPGPGRFRQFYQCDADTVGAPSVAADAEICAMLADCLEEVGIDRGDYIVRVNNR 180

Query: 173 KILDGILEKI----GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           K+L+G++E        + D+  +ER IVLRAIDKLD+ GL GV+ LLG GR D+SGDFT 
Sbjct: 181 KVLNGVMEVAGVLDPANPDNFAHERGIVLRAIDKLDRLGLDGVRALLGAGRKDDSGDFTD 240

Query: 229 GANLTSEQIDIMVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
           GA L+  Q D+++ F+        +++  L ELV G+  G +G +EL  I++L+   GY 
Sbjct: 241 GAGLSDTQADVVMGFMQAKRDSGAETVARLRELVAGSETGAQGVDELETIADLMAAGGYG 300

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           ++R++I  ++VRGL YYTG V+EA L F + +EK +P  FGSV GGGRYD LV RF GQ 
Sbjct: 301 ADRVEIDPSVVRGLGYYTGPVFEAELTFEIQDEKGRPRNFGSVAGGGRYDDLVKRFTGQE 360

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           VPATG SIG+ RL+ AL++    +   +      +     D   +S YQ     LR AGI
Sbjct: 361 VPATGVSIGVDRLLAALQAKGRMSAQAEGP----VVVTVMDKARMSDYQAMVAELRQAGI 416

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           RAE++LG+ KNFGNQLKYADRR  P+A+I G  E  +GM+QIKDL  G +++ E    E 
Sbjct: 417 RAEVYLGNPKNFGNQLKYADRRASPVAVIAGGDEFDKGMIQIKDLILGAKIA-ESATLEE 475

Query: 466 WREARVAQITIPISELVSTVKKILQENK 493
           W+  R +Q  +   +LVS V++IL+ N+
Sbjct: 476 WK-DRPSQYEVARGDLVSKVREILELNR 502


>gi|259417734|ref|ZP_05741653.1| histidyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259346640|gb|EEW58454.1| histidyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 504

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 232/509 (45%), Positives = 326/509 (64%), Gaps = 22/509 (4%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A  P+GF D   +E+  R  +L +I  +Y +YGF+ +E+  +E  ++LG
Sbjct: 1   MAKAKKQPRPKAITPKGFRDYFGEEVTQRTHMLATIAEVYHHYGFEALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ--DDD------GQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
           KFLPD DRPN GVF+ Q  D++      G W++LRYDLTAPLAR  A++ + +  P R +
Sbjct: 61  KFLPDVDRPNAGVFAWQEADENDPEGKPGDWMALRYDLTAPLARVYAQHRNDLPNPYRRF 120

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
            +GPV+RNEK GPGR+RQF QCD D VG+++  ADAE+CMM++DTLE VGI R DY + +
Sbjct: 121 AMGPVWRNEKPGPGRYRQFYQCDADTVGTASMAADAEICMMLSDTLEKVGIPRGDYLVRV 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           NNRK+L+G+LE +GL  +D   +R  VLR IDK DK G  GV+ LLG+GR D SG +  G
Sbjct: 181 NNRKVLNGVLEAMGLAEED--PKRDDVLRTIDKFDKVGESGVRELLGKGRLDASGAYIDG 238

Query: 230 ANLTSEQIDIMVSFLSIDLE---KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
             L  +Q + +++FL+   +   ++M  L   V  +  G++G  EL ++  L   +GY+ 
Sbjct: 239 VGLEEQQAEPVLAFLTSKGDTVAETMTNLRAAVGDSKVGQEGVAELELMGALFAAAGYSD 298

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
           +RI I  +IVRGL YYTG V+EA L F + +EK +   FGSV GGGRYDGLV RF GQ V
Sbjct: 299 DRILIDPSIVRGLGYYTGPVFEAELTFEIFDEKGRKRQFGSVAGGGRYDGLVKRFTGQEV 358

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           PA G SIG+ RL+ AL+                +     D D ++ YQ     LR AGIR
Sbjct: 359 PAVGLSIGVDRLLAALREKGRL----AATPTGPVVVTVMDRDRMADYQAMVAELRQAGIR 414

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE++LG+ KNFGNQLKYAD+R+ P+A+I+G  E+ RG++QIKDL  G +++ E    E W
Sbjct: 415 AEVYLGNPKNFGNQLKYADKRHSPVAVIEGGDEKERGVIQIKDLILGAKIA-ESATLEEW 473

Query: 467 REARVAQITIPISELVSTVKKILQENKEE 495
           +E R +Q  +P +ELV+ V+ IL    ++
Sbjct: 474 KE-RPSQFEVPRTELVAKVRDILASQAKD 501


>gi|240851002|ref|YP_002972402.1| histidyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240268125|gb|ACS51713.1| histidyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 495

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 270/498 (54%), Positives = 359/498 (72%), Gaps = 7/498 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K+ K +A LPRGF D  + ++     ++  IR +YE YGF+ +ETP+ EY+D LGKF
Sbjct: 1   MSLKQEKTKARLPRGFVDRTSAQLYATETMIAQIREVYELYGFEALETPIFEYTDVLGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPDEDRPN GVFSLQDDD QW+SLRYDLTAPLARY AENF+ +  P R+YR+G VFRNEK
Sbjct: 61  LPDEDRPNAGVFSLQDDDEQWMSLRYDLTAPLARYFAENFEVLPKPYRSYRLGFVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+    ADAE+CMM AD+LE +G +++DY I +NNRKIL+ +L
Sbjct: 121 PGPGRFRQFMQFDADIVGTPTVAADAEICMMAADSLEKLGFQQHDYAIRLNNRKILESVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E IGL   +++  RL VLRA+DKLDKFG +GV+LLLG+GR D SGDFTKGA L  ++I+ 
Sbjct: 181 ELIGLGEREQIERRLTVLRAMDKLDKFGPEGVRLLLGKGRLDESGDFTKGAELKDKEIEC 240

Query: 240 MVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           ++S L+++    E+ +  L ++V  +  G +G  EL  +  +   +GY+ NRIKI  ++V
Sbjct: 241 ILSLLTVNAKTAEEILDALRQVVGQSAQGLEGVRELEEMQAIFVANGYH-NRIKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V+N+  + VVFGSVGGGGRYDGLV+RF+G+N+PATGFSIG+S
Sbjct: 300 RGLEYYTGPVFEAALLFDVLNDDGQKVVFGSVGGGGRYDGLVARFRGENIPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RLI AL++L       +  GPV++  MD + ++++ YQ     LR AGIRAE++LG+S  
Sbjct: 360 RLIAALQNLGKLPMK-ETTGPVVVLMMDKEPEAVAGYQKMVMQLRGAGIRAELYLGASG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER  G +QIKDL +G  LS EIK+N++WRE+R AQ+ I
Sbjct: 418 IKAQMKYADRRQAPCVVIQGSQERESGKIQIKDLIEGARLSHEIKDNQTWRESRPAQVMI 477

Query: 477 PISELVSTVKKILQENKE 494
              +LV TV+ IL   K 
Sbjct: 478 DEEQLVQTVQDILAAQKR 495


>gi|114765488|ref|ZP_01444598.1| histidyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114542198|gb|EAU45229.1| histidyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 490

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 234/499 (46%), Positives = 322/499 (64%), Gaps = 15/499 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A+ P+GF D    E+  R  +L++I  +Y  YGFD +E+  +E  ++LG
Sbjct: 1   MAKVKKAPRPKAQTPKGFRDYFGPEVTERAEMLEAIAGVYHRYGFDALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF+ QD+D  W++LRYDLTAPLAR  A++ + +  P R Y +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFAWQDEDESWMALRYDLTAPLARVYAQHRNDLPLPYRRYAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VG+++  ADAE+C M+ADTLE VGI R DY + +NNRK+L+G
Sbjct: 121 EKPGPGRFRQFYQCDADTVGAASVAADAEICAMLADTLEVVGIPRGDYLVRVNNRKVLNG 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +LE +GL  D +   R  VLR IDK DK G  GV+ LLG+GR D SG +  G  L+  Q 
Sbjct: 181 VLETMGLEDDAQ---RDAVLRTIDKFDKVGEAGVRELLGKGRLDASGAYIDGVGLSEAQA 237

Query: 238 DIMVSFLSIDLEKSMHELYEL---VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + +V+FL+     +   +  L   V  +  G +G +EL  I  L+   GY  +RI+I  +
Sbjct: 238 EPVVAFLTSKGADAAATVANLRAAVGSSEIGAEGVDELEEIGALLAAQGYGPDRIEIDPS 297

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL YYTG V+EA L F + +EK +   FGSV GGGRYD LV RF GQ VPATG SIG
Sbjct: 298 VVRGLGYYTGPVFEAELTFEIFDEKGRKRQFGSVAGGGRYDDLVKRFTGQAVPATGVSIG 357

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL+ AL+        ++      +     D D ++ YQ     LR AGIRAE++LG+ 
Sbjct: 358 VDRLLAALREKGRIGGTVQG----PVVVTVMDRDRMADYQAMVAELRNAGIRAEVYLGNP 413

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           KNFGNQLKYAD+R+ P+A+I+G  E+ RG++QIKDL  G +L+ E  + E W+E R +Q 
Sbjct: 414 KNFGNQLKYADKRSSPVAVIEGGDEKERGVVQIKDLVLGAKLA-ESASLEEWKE-RPSQY 471

Query: 475 TIPISELVSTVKKILQENK 493
            +   +LV+ V++IL +  
Sbjct: 472 EVARGDLVAKVREILNQWA 490


>gi|163740384|ref|ZP_02147778.1| histidyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161386242|gb|EDQ10617.1| histidyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 495

 Score =  346 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 234/499 (46%), Positives = 321/499 (64%), Gaps = 15/499 (3%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ + +A  P+GF D   +E+  R+ +L +I  +Y  YGFD +E+  +E  ++LGKFLP
Sbjct: 5   KKQPRPKAITPKGFRDYFGEEVSQRSEMLQAIAGVYHRYGFDALESSAVETVEALGKFLP 64

Query: 62  DEDRPNKGVFSLQ--DDDGQ--WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           D DRPN+GVF+ Q  D+ G   W++LRYDLTAPLAR  A++ + +  P R Y +GPV+RN
Sbjct: 65  DVDRPNEGVFAWQEYDEGGNGDWMALRYDLTAPLARVYAQHRNDLPTPYRRYAMGPVWRN 124

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGR+RQF QCD D VG+++  ADAE+C M++DTLE VGI R DY + +NNRK+L+G
Sbjct: 125 EKPGPGRYRQFYQCDADTVGTASMAADAEICAMLSDTLETVGIPRGDYLVRVNNRKVLNG 184

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +LE +GL   D   +R  VLR IDK DK G  GV+ LL +GR D SG F  G  L+ +Q 
Sbjct: 185 VLEAMGLEAGDA--KRDDVLRTIDKFDKVGEAGVRELLTKGRLDASGAFIDGVGLSDDQA 242

Query: 238 DIMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
             +++FL     D  K++  L E V  +  G +G  EL  I +L+   GY ++RI I  +
Sbjct: 243 APVLAFLTSKGADAAKTLANLSEAVGSSSIGAEGVGELEQIGDLLAAGGYGADRIDIDPS 302

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL YYTG VYEA L F +++EK +   FGSV GGGRYD LV RF GQ VPATG SIG
Sbjct: 303 VVRGLGYYTGPVYEAELTFEILDEKGRKRQFGSVSGGGRYDDLVKRFTGQEVPATGVSIG 362

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL+ AL+         K      +     D   ++ YQ     LR AGIRAE++LG+ 
Sbjct: 363 VDRLLAALREKGRI----KAEATGPVVVTVMDKARMADYQTMVAELRNAGIRAEVYLGNP 418

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           KNFGNQLKYAD+RN P+A+I+G  E+ RG++QIKDL  G +++ E    E W+E R +Q 
Sbjct: 419 KNFGNQLKYADKRNSPIAVIEGGEEKDRGVVQIKDLILGAQIA-ENATLEEWKE-RPSQF 476

Query: 475 TIPISELVSTVKKILQENK 493
            +P  +LV+ V++IL    
Sbjct: 477 EVPRGDLVAKVREILAGQG 495


>gi|83951534|ref|ZP_00960266.1| histidyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83836540|gb|EAP75837.1| histidyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 495

 Score =  346 bits (886), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 230/502 (45%), Positives = 318/502 (63%), Gaps = 18/502 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +AE P+GF D    ++  R  +LD I  +Y  YGFD +E+  +E  ++LG
Sbjct: 1   MAKPKKTPRPKAETPKGFTDYFGSDVTQRKEMLDGIAAVYHRYGFDALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ--DDD--GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
           KFLPD DRPN+GVF+ Q  DD+  G W++LRYDLTAPLAR  A++ + +    R Y +GP
Sbjct: 61  KFLPDVDRPNEGVFAWQEADDNDKGDWLALRYDLTAPLARVYAQHRNDLPTLYRRYAMGP 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+RNEK GPGRFRQF QCD D VG+++  ADAE+C M++DTLE VGI R DY + INNRK
Sbjct: 121 VWRNEKPGPGRFRQFYQCDADTVGTASMAADAEICAMLSDTLEEVGIPRGDYLVRINNRK 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L+G+LE IG   D        VLR IDK DK G  GV+ LL +GR DNSG F  G  L+
Sbjct: 181 VLNGVLEAIGPREDQ--ITHDNVLRTIDKFDKVGEAGVRELLTKGRLDNSGAFIDGVGLS 238

Query: 234 SEQIDIMVSFLS---IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            +Q   +++FL+    D   ++  L   V  +  G++G  EL  I EL+   GY ++RI 
Sbjct: 239 EDQAAPVLAFLTSKAADAAGTIANLRAAVGDSKVGQEGIAELEQIGELLTAQGYGADRIV 298

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I  ++VRGL YYTG V+EA L F +++EK +   FGSV GGGRYD LV+RF GQ VPA G
Sbjct: 299 IDPSVVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVAGGGRYDDLVARFTGQKVPAVG 358

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL++           G   +     D + ++ YQ     LR+AGIRAE++
Sbjct: 359 ISIGVDRLLAALRAKGRV----SREGQGPVIVTVMDRERMADYQAMVSELRSAGIRAEVY 414

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD+R  P+A+IQG  E  +G++ +KDL  G +++ E    E W+E R
Sbjct: 415 LGNPKNFGNQLKYADKRGSPVAVIQGGDELDKGVIMLKDLILGAQIA-ENATLEEWKE-R 472

Query: 471 VAQITIPISELVSTVKKILQEN 492
            +Q  +   +LV+  ++I++ +
Sbjct: 473 PSQFEVARGDLVARTREIIESH 494


>gi|254475269|ref|ZP_05088655.1| histidyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214029512|gb|EEB70347.1| histidyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 495

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 235/498 (47%), Positives = 321/498 (64%), Gaps = 15/498 (3%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ + +A  P+GF D   +E+  R  +L +I  +Y +YGFD +E+  +E  ++LGKFLP
Sbjct: 5   KKQPRPKAITPKGFRDYFGEEVSQRTEMLQAIAGVYHHYGFDALESSAVETVEALGKFLP 64

Query: 62  DEDRPNKGVFSLQ----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           D DRPN+GVF+ Q    D  G W++LRYDLTAPLAR  A++ + +  P R Y +GPV+RN
Sbjct: 65  DVDRPNEGVFAWQEADDDGKGDWMALRYDLTAPLARVYAQHRNDLPNPYRRYAMGPVWRN 124

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGR+RQF QCD D VG+++  ADAE+CMM++DTLE VGI R DY + +NNRK+L+G
Sbjct: 125 EKPGPGRYRQFYQCDADTVGTASMAADAEICMMLSDTLETVGIPRGDYLVRVNNRKVLNG 184

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +LE +GL  DD   +R  VLR IDK DK G  GV+ LLG+GR D SG +  G  L   Q 
Sbjct: 185 VLEAMGLAEDD--PKRDDVLRTIDKFDKVGEAGVRELLGKGRLDASGAYIDGVGLGEAQA 242

Query: 238 DIMVSFLS---IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           D +++FL+    D+  +M  L   V  +  G +G  EL  I EL+   GY ++++ I  +
Sbjct: 243 DPVIAFLTSRADDVAGTMANLRAAVGDSKVGAEGIAELEQIGELIAAGGYGADQVLIDPS 302

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           IVRGL YYTG V+EA L F +++EK +   FGSV GGGRYDGLV RF GQ VPA G SIG
Sbjct: 303 IVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVSGGGRYDGLVKRFIGQEVPAVGVSIG 362

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL+ AL+                +     D   ++ YQ     LR AGIRAE++LG+ 
Sbjct: 363 VDRLLAALREKGRL----STTPTGPVVVTVMDKARMADYQAMVAELRNAGIRAEVYLGNP 418

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           KNFGNQLKYAD+RN P+AII+G  E+ RG++QIKDL  G +++ E    E W+E R +Q 
Sbjct: 419 KNFGNQLKYADKRNSPIAIIEGGEEKERGVIQIKDLILGAKIA-ESATLEEWKE-RPSQF 476

Query: 475 TIPISELVSTVKKILQEN 492
            +P  +LV+ V++IL   
Sbjct: 477 EVPRGDLVAKVREILASQ 494


>gi|310816589|ref|YP_003964553.1| histidyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755324|gb|ADO43253.1| histidyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 518

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 241/503 (47%), Positives = 325/503 (64%), Gaps = 15/503 (2%)

Query: 1   MGKKT---KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K     + RAE P+GF D    E+  R  +L  I  +Y  YGFD +ET  +E  ++LG
Sbjct: 21  MAKDKTRARPRAETPKGFRDYFGAEVTERAEMLHQIAGVYHAYGFDALETSAVETVEALG 80

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF  QD+D  W++LRYDLTAPLAR  ++  + +  P R Y +GPV+RN
Sbjct: 81  KFLPDVDRPNEGVFGWQDEDADWLALRYDLTAPLARVYSQFRNDLPTPYRRYAMGPVWRN 140

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VG+ +  ADAE+C M++DTLE VGI R DY + +NNRK+L+G
Sbjct: 141 EKPGPGRFRQFYQCDADTVGAPSVAADAEICAMLSDTLEVVGIPRGDYIVKVNNRKVLNG 200

Query: 178 ILEKIGL----HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           ++E  G+      D  + ER IVLRAIDK D+ G  GV+ LLG GR D SGDFTKGA L+
Sbjct: 201 VMEVAGVLDPSDPDKFVTERGIVLRAIDKFDRLGDAGVRALLGAGRKDESGDFTKGAGLS 260

Query: 234 SEQIDIMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           +EQ DI++ F+        ++   L ELV G+  G  G +EL  I+EL+   GY ++R+ 
Sbjct: 261 AEQADIVMGFMFARRDTGVQTAARLRELVTGSAIGATGVDELETIAELLEAQGYGADRVM 320

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I   +VRGL YYTG V+EA L F +++EK +P  FGSV GGGRYD LV RF GQ VPATG
Sbjct: 321 IDPAVVRGLGYYTGPVFEAELTFEILDEKGRPRQFGSVSGGGRYDDLVKRFTGQEVPATG 380

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL++         +     +     D D ++ YQ     LR AGIRAE++
Sbjct: 381 VSIGVDRLLAALRAKGRMGQQTAQGP---VVVTVMDRDRMADYQSIVAELRRAGIRAEVY 437

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ K FGNQLKYAD+RN P+AII+G  E++RG++QIKDL  G +++    + E W+  R
Sbjct: 438 LGNPKQFGNQLKYADKRNAPIAIIEGGDEKARGVVQIKDLVLGAQIAAS-ASLEEWK-DR 495

Query: 471 VAQITIPISELVSTVKKILQENK 493
            +Q  +  +++V+ VK I+    
Sbjct: 496 PSQYEVARADMVARVKAIIAGQA 518


>gi|260425603|ref|ZP_05779583.1| histidyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260423543|gb|EEX16793.1| histidyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 490

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 232/499 (46%), Positives = 324/499 (64%), Gaps = 15/499 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K+ K    +A+ P+GF D    E+  R  +L +I  +Y  Y F  +E+  +E  ++LG
Sbjct: 1   MAKEKKAPRPKAQTPKGFRDYFGSEVTERAEMLHAIAGVYHRYCFKALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF+ QD+D  W++LRYDLTAPLAR  A++ + +  P R Y +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFAWQDEDESWMALRYDLTAPLARVYAQHRNDLPLPYRRYAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VG+++  ADAE+C M++DTLE VGI R DY + +NNRK+L+G
Sbjct: 121 EKPGPGRFRQFYQCDADTVGAASVAADAEICAMLSDTLEVVGIPRGDYLVRVNNRKVLNG 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +LE +GL  D +   R  VLR IDK DK G  GV+ LLG+GR D SG +  G  L+  Q 
Sbjct: 181 VLEAMGLDDDAQ---RDAVLRTIDKFDKVGESGVRELLGKGRLDASGAYIDGVGLSDAQA 237

Query: 238 DIMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           D +++FL     D   ++  L   +  +  G +G +EL  I  L+   GY S+RI+I  +
Sbjct: 238 DPVLAFLTSKGADAGATVANLRAAIGSSQIGAEGVDELEEIGALLAAQGYGSDRIEIDPS 297

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL YYTG V+EA L F +++EK +   FGSV GGGRYD LV RF GQ+VPATG SIG
Sbjct: 298 VVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVSGGGRYDDLVKRFTGQSVPATGVSIG 357

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL+ AL+                +     D + ++ YQ     LR AGIRAE++LG+ 
Sbjct: 358 VDRLLAALREKGRIG----STAQGPVVVTVMDRERMADYQAMVAELRNAGIRAEVYLGNP 413

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           KNFGNQLKYAD+RN P+A+I+G  E++RG+LQIKDL  G  L++   + + W+E R +Q 
Sbjct: 414 KNFGNQLKYADKRNSPVAVIEGGDEKARGVLQIKDLVLGARLAQN-ASLKEWKE-RPSQY 471

Query: 475 TIPISELVSTVKKILQENK 493
            +P +E+V+ V++IL++  
Sbjct: 472 EVPRAEMVAKVREILEQWA 490


>gi|121602225|ref|YP_989436.1| histidyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166227945|sp|A1UTY3|SYH_BARBK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|120614402|gb|ABM45003.1| histidyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 496

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 269/497 (54%), Positives = 361/497 (72%), Gaps = 7/497 (1%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M KK  K +  LPRGF D  + ++     ++  I  +YE+YGF+ +ETP+ EY+D LGKF
Sbjct: 1   MSKKEEKTKVRLPRGFVDRTSAQLHALETMIAQIHEVYESYGFEALETPIFEYTDVLGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN GVFSLQD+D QW+SLRYDLTAPLARY AENF+ +  P R+YR G VFRNEK
Sbjct: 61  LPDSDRPNAGVFSLQDEDEQWMSLRYDLTAPLARYFAENFEILPKPYRSYRSGFVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VGSS   ADAE+CMM AD+LE +GI+R+DY I ++NRKILDG+L
Sbjct: 121 PGPGRFRQFMQLDADIVGSSTVAADAEICMMAADSLERLGIQRHDYVIRLSNRKILDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E IGL GD++  +RL +LRAIDK DKFG++GV+LLLG+GR D SGDFTKGA L+ ++ + 
Sbjct: 181 ELIGLQGDEQAEKRLTILRAIDKFDKFGMEGVRLLLGKGRLDESGDFTKGAGLSQQESEP 240

Query: 240 MVSFLSI---DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           ++S +S+     E ++  L  +V  TI G +G +EL  +  +  K+GY  +RIKI  ++V
Sbjct: 241 ILSLISVGAETAEATLDNLKNIVGHTIRGLEGIHELEEMQTIFSKNGY-QDRIKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYTG V+EA L F V+NE+ + VVFGSVGGGGRYDGLV+RF+ + VPATGFS+G+S
Sbjct: 300 RGLDYYTGPVFEAELLFDVLNEEGQKVVFGSVGGGGRYDGLVARFRDEAVPATGFSVGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ AL +L       K +GPV++  MD D + ++ YQ     LR AGIR+E++LG++  
Sbjct: 360 RLMAALHNLGKCPVK-KTVGPVVVLMMDKDPEYVAYYQKMVMQLRHAGIRSELYLGAAG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR+ P  +IQG  ER  G +QIKDL +G  LS EIK+N++WRE+R AQI +
Sbjct: 418 IKAQMKYADRRHAPCVVIQGASERQEGKVQIKDLIEGARLSAEIKDNQTWRESRPAQIMV 477

Query: 477 PISELVSTVKKILQENK 493
             ++LV  V++IL  ++
Sbjct: 478 DENQLVQAVQEILVAHQ 494


>gi|254511141|ref|ZP_05123208.1| histidyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534852|gb|EEE37840.1| histidyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 495

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 231/502 (46%), Positives = 315/502 (62%), Gaps = 18/502 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A  P+GF D   +E+  R  +L +I  +Y  YGFD +E+   E  ++LG
Sbjct: 1   MAKPKKQPRPKAVTPKGFRDYFGQEVSQRTEMLRTIAGVYHRYGFDALESSAAETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ--DDDGQ--WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
           KFLPD DRPN GVF+ Q  D+ G   W++LRYDLTAPLAR  A++ + +  P R Y +GP
Sbjct: 61  KFLPDVDRPNAGVFAWQEFDEGGNGDWMALRYDLTAPLARVYAQHRNDLPTPYRRYAMGP 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+RNEK GPGR+RQF QCD D VG+++  ADAE+C M++DTLE VGI R DY + +NNRK
Sbjct: 121 VWRNEKPGPGRYRQFYQCDADTVGTASMAADAEICAMLSDTLETVGIPRGDYLVRVNNRK 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L+G+LE +GL  D    + +  LR IDK DK G  GV+ LL +GR D SG F  G  L+
Sbjct: 181 VLNGVLEAMGLGEDVSARDNV--LRTIDKFDKVGEAGVRELLTKGRLDASGAFIDGVGLS 238

Query: 234 SEQIDIMVSFLS---IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            +Q + +++FL+    D   ++  L   V  +  G  G  EL  I  L+   GY ++RI+
Sbjct: 239 DDQAEPVIAFLTSKAADTAGTLTNLRAAVGDSKIGADGIAELEQIGALLDAGGYGADRIE 298

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I  ++VRGL YYTG VYEA L F + +EK +   FGSV GGGRYD LV RF GQ VPATG
Sbjct: 299 IDPSVVRGLGYYTGPVYEAELTFEIFDEKGRKRQFGSVSGGGRYDDLVKRFTGQEVPATG 358

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL+                +     D D ++ YQ     LR AGIRAE++
Sbjct: 359 VSIGVDRLLAALREKGRI----SAQATGPVVVTVMDRDRMADYQAMVAELRNAGIRAEVY 414

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD+RN P+A+I+G  E++ G++QIKDL  G +++ E    E W+E R
Sbjct: 415 LGNPKNFGNQLKYADKRNAPIAVIEGGDEKAGGIVQIKDLILGAKIA-ESATLEEWKE-R 472

Query: 471 VAQITIPISELVSTVKKILQEN 492
            +Q  +P  +LV+ V++IL   
Sbjct: 473 PSQFEVPRGDLVAKVREILDSQ 494


>gi|170750680|ref|YP_001756940.1| histidyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170657202|gb|ACB26257.1| histidyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 515

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 250/502 (49%), Positives = 331/502 (65%), Gaps = 15/502 (2%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   L+  LPRGF D    EI  + R+L++IR  +E YGF+ +ETP +EY+++LGKFLPD
Sbjct: 11  KADTLKPRLPRGFVDRRAGEIAAQGRMLETIRKSFELYGFEALETPFVEYTEALGKFLPD 70

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
            DRPN GVFS QDDD  W+SLRYDLTAPLAR+VAEN+D +  P R+YR G VFRNEK GP
Sbjct: 71  LDRPNAGVFSFQDDDEAWLSLRYDLTAPLARFVAENYDALPKPYRSYRAGYVFRNEKPGP 130

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GRFRQF+Q D D VG+ +  ADAE CM+MADTL  +G+    Y + +NNRK+LDG++E I
Sbjct: 131 GRFRQFMQFDADIVGAGSVAADAETCMLMADTLNRLGL-GGQYVVKVNNRKVLDGVMEAI 189

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           GL G DK  +RL VLRAIDKLD+ G+ GV+ LLG GR D SGDFTKGA L +  I  +++
Sbjct: 190 GLAGPDKAGQRLTVLRAIDKLDRLGVDGVRDLLGSGRKDESGDFTKGAGLDAAAIGRILA 249

Query: 243 FLSID------------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           ++S               EK     ++ V  +  G +G  EL  I  L   +GY  + I+
Sbjct: 250 YVSFQADAGDGADKVAFWEKFFAGWHDAVGDSETGREGIAELHAIMRLCAAAGYGHDVIR 309

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              ++VRGLEYYTG VYEA L FPV NE  + V FGSV GGGRYDGLV RF+ + VPATG
Sbjct: 310 ADPSVVRGLEYYTGPVYEAELTFPVTNEDGQTVRFGSVAGGGRYDGLVGRFRAEPVPATG 369

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           FSIG+SRL  AL+ + S      E     +  +  D ++++ YQ    +LR  GIRAE++
Sbjct: 370 FSIGVSRLFSALQLVGSPLIAGAEAPG-PVVVLVLDRENMADYQRLVALLRADGIRAELY 428

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG++     Q+KYADRR  P+A+IQG+ ER  G +QIKDL  G + +  I +N  W+ AR
Sbjct: 429 LGAAG-MKAQMKYADRRRAPVAVIQGSNERLAGEVQIKDLIAGAQAAESIASNAEWKAAR 487

Query: 471 VAQITIPISELVSTVKKILQEN 492
            AQ++ P ++LV+ V+ +L  +
Sbjct: 488 PAQVSCPEADLVAQVRAVLSRH 509


>gi|84683477|ref|ZP_01011380.1| histidyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84668220|gb|EAQ14687.1| histidyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 517

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 226/522 (43%), Positives = 322/522 (61%), Gaps = 35/522 (6%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K+ K    +AE P+GF D    ++  R ++LD+I  +Y  YGFD +E+  +E  ++LG
Sbjct: 1   MAKQKKQPRPKAETPKGFRDYFGADVEERRQMLDAIAGVYHRYGFDALESSGVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF+ QD+D  W++LRYDLTAPLAR  A++ + +  P R Y +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFAWQDEDETWMALRYDLTAPLARVYAQHRNDLPTPYRRYAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGR+RQF QCD D VG+++  ADAE+C M++D LE VGI R DY + INNRK+L+G
Sbjct: 121 EKPGPGRYRQFYQCDADTVGTASMAADAEICAMLSDALEEVGIPRGDYVVRINNRKVLNG 180

Query: 178 IL-----------------------EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL 214
           +L                           + G         ++R +DK DK G++GV+ L
Sbjct: 181 VLTSVTSGAERNDIAGMSPSELREYRDFEMQGLQNDPALDAIMRTLDKFDKVGVEGVRNL 240

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL---EKSMHELYELVKGTIAGEKGFNE 271
           L  GR D SG F +G  L++   +  V+FL+      E ++  L E++  +  G +G NE
Sbjct: 241 LTHGRKDQSGAFIEGVGLSNSMAEGFVAFLTARGSTNEATLARLREVLSFSAIGLEGVNE 300

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L  I  L++  GY  +RI I  ++VRGL YYTG V+EA L F ++++K +P  FGSV GG
Sbjct: 301 LEEIIALLKAQGYGPDRIVIDPSVVRGLGYYTGPVFEAELTFEILDDKGRPRQFGSVAGG 360

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           GRYD LV+RF GQ VPA G SIG+ RL+ AL+         +      +     D D ++
Sbjct: 361 GRYDDLVARFTGQTVPAVGVSIGVDRLLAALREKGRVGGTAQG----PVVVTVMDRDRMA 416

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
            YQ     LR AGIRAE++LG+ KNFGNQ+KYAD+RN P+AII+G  E+ RG++Q+KDL 
Sbjct: 417 DYQTMVADLRNAGIRAEVYLGNPKNFGNQMKYADKRNSPIAIIEGGDEKERGVVQLKDLI 476

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            G +++ E    E W+E R +QI +  ++LV+ V+K+L    
Sbjct: 477 LGAKIA-ENATLEEWKE-RPSQIEVSRADLVAEVRKMLDSQN 516


>gi|192289779|ref|YP_001990384.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|229558724|sp|B3QII5|SYH_RHOPT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|192283528|gb|ACE99908.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 509

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 269/502 (53%), Positives = 349/502 (69%), Gaps = 16/502 (3%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRG AD    EI     +++ IR +YE YGF+P+ETP  EY+D+LGKFLP
Sbjct: 6   KKPQKLRARLPRGLADRGPAEIAATRAMVEKIREVYERYGFEPVETPAFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D+DRPN+GVFSLQDDD QWISLRYDLTAPLARYVAENFD +  P R+YR G VFRNEK G
Sbjct: 66  DQDRPNEGVFSLQDDDEQWISLRYDLTAPLARYVAENFDQLPKPYRSYRFGWVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VGS +  ADAEMCMM ADT+EA+GI R  Y + +NNRKILDG+LE 
Sbjct: 126 PGRFRQFMQFDADTVGSGSPAADAEMCMMAADTMEALGIPRGSYLVKLNNRKILDGVLEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IG+ GD+ + +RL+VLRAIDKLD+ GLQGV+ LLGEGR D SGDFT+GA+L + QI  ++
Sbjct: 186 IGIGGDEHIKQRLVVLRAIDKLDRLGLQGVEQLLGEGRKDESGDFTRGASLNAGQIRDVI 245

Query: 242 SFLSIDLEKS---------MHELYEL-VKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           + L+               + E   L          G  +L  I+++   SGY++ RI++
Sbjct: 246 TLLNFAGWGDIVDGSNTHTLDEWEGLRFSVNSTFSAGIQDLRQITKITEASGYDTGRIRV 305

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
            +T+VRGLEYYTG V+E  L     +EK +PV FGSVGGGGRYDGLVSRF+G+ VPATGF
Sbjct: 306 DNTVVRGLEYYTGPVFEVELLLDTKDEKGRPVRFGSVGGGGRYDGLVSRFRGEPVPATGF 365

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG+SRL  AL +L     N  + GPV++T    +   ++ YQ     LR AGIRAE++L
Sbjct: 366 SIGVSRLQAAL-TLIGQLGNKPQAGPVVVTVFGGE---IAGYQKMVATLRKAGIRAELYL 421

Query: 412 GSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           G+ K + G Q+KYAD+RN P AIIQG+ E+ +G++QIKDL  G EL+   K+ + + + +
Sbjct: 422 GNPKHSLGQQMKYADKRNSPCAIIQGSDEKQQGIVQIKDLILGAELASLEKDRDEYLKKQ 481

Query: 471 V-AQITIPISELVSTVKKILQE 491
             AQ +    E+V+ V+++LQ 
Sbjct: 482 AEAQFSCKEDEMVAKVQELLQR 503


>gi|126725818|ref|ZP_01741660.1| histidyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126705022|gb|EBA04113.1| histidyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 522

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 246/502 (49%), Positives = 330/502 (65%), Gaps = 16/502 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +AE P+GF D    E+  R  +LD I  +Y+ YGF+ +ET  +E  ++LG
Sbjct: 26  MAKVKKTPRPKAETPKGFRDYFGAEVAERKAMLDQIGAVYQLYGFEALETSAVETVEALG 85

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF+ Q++D  W++LRYDLTAPLAR  A+N + +  P R Y +GPV+RN
Sbjct: 86  KFLPDVDRPNEGVFAWQEEDEDWVALRYDLTAPLARVYAQNRNELPTPYRRYAMGPVWRN 145

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VG+ +  ADAE+C M++DTLEAVGI R DY + INNRK+L+G
Sbjct: 146 EKPGPGRFRQFYQCDADTVGAPSVAADAEICAMLSDTLEAVGIPRGDYVVRINNRKVLNG 205

Query: 178 ILEKIGL----HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           ++E  G+      D   +ER IVLRAIDKLD+ G+ GV+ LLG GR D+SGDFT GA L+
Sbjct: 206 VMEVAGVLDPSDPDKFAHERGIVLRAIDKLDRLGVDGVRALLGAGRKDDSGDFTDGAGLS 265

Query: 234 SEQIDIMVSFLSIDLEK---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
             Q ++++ F+S   E    ++  L ELV+G+  G +G  EL  I+ L+   GY  +RI+
Sbjct: 266 DAQAEVVMGFMSAKRENGAVTVARLAELVEGSKVGAEGVAELETIANLLNVQGYGPDRIE 325

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I  ++VRGL YYTG VYEA L F +++EK +   FGSV GGGRYD LV RF GQ VPATG
Sbjct: 326 IDPSVVRGLGYYTGPVYEAELTFEILDEKGRKRQFGSVAGGGRYDDLVKRFTGQAVPATG 385

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL++               +     D D +  YQ     LR AGIRAE++
Sbjct: 386 VSIGVDRLLAALRAKGRGAAE----TAGPVVVTVMDRDRMGDYQAMVAELRQAGIRAEVY 441

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD+R  P+AIIQG  E  RG++QIKDL  G +++ E  + E W+ ++
Sbjct: 442 LGNPKNFGNQLKYADKRCSPVAIIQGGDEHERGVVQIKDLVLGAKIA-ENASLEEWK-SQ 499

Query: 471 VAQITIPISELVSTVKKILQEN 492
            AQ  I  ++LV+ V+ +L   
Sbjct: 500 PAQREISRADLVAEVRAMLGSQ 521


>gi|163868801|ref|YP_001610025.1| histidyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161018472|emb|CAK02030.1| Histidyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 508

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 273/498 (54%), Positives = 358/498 (71%), Gaps = 7/498 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K+ K +A LPRGF D  + ++     ++  IR +YE YGF+ +ETP+ EY+D LGKF
Sbjct: 14  MSLKQEKTKARLPRGFVDRTSAQLYATETMIAQIREVYELYGFEALETPIFEYTDVLGKF 73

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN GVFSLQDDD QW+SLRYDLTAPLARY AENF+T+  P R+YR+G VFRNEK
Sbjct: 74  LPDSDRPNAGVFSLQDDDEQWMSLRYDLTAPLARYFAENFETLPKPYRSYRLGFVFRNEK 133

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+    ADAE+CMM AD+LE +GIK +DY I +NNRKIL+ +L
Sbjct: 134 PGPGRFRQFMQFDADIVGTPTVAADAEICMMAADSLEKLGIKPHDYAIRLNNRKILESVL 193

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL    +  +RL VLRA+DKLDKFG +GV+LLLG+GR D SGDFTKGA L  ++I+ 
Sbjct: 194 QLIGLGESGQSEKRLTVLRAMDKLDKFGPEGVRLLLGKGRLDESGDFTKGAELQDKEIEC 253

Query: 240 MVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           ++S L+I+    E+++  L ++V  +  G +G  EL  +  +   +GY+ NRIKI  ++V
Sbjct: 254 ILSLLTIEAKTAEETLDILRQIVGQSDQGLEGVRELEEMQTIFAVNGYH-NRIKIDPSVV 312

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F V+N+  + VVFGSVGGGGRYDGLV+RF+G+N+PATGFSIGIS
Sbjct: 313 RGLEYYTGPVFEAALLFDVLNDDGQKVVFGSVGGGGRYDGLVARFRGENIPATGFSIGIS 372

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RLI AL++LE        +GPV++  MD + ++++ YQ     LR AGI AE +LG+S  
Sbjct: 373 RLIAALQNLEKLPVKN-SLGPVVVLMMDKEPEAVACYQKMVMQLRNAGICAEFYLGASG- 430

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  IIQG+ ER  G +QIKDL +G  LS EIK+N++WRE+R AQ+ +
Sbjct: 431 IKAQMKYADRRQAPCVIIQGSQERESGKIQIKDLIEGARLSHEIKDNQTWRESRPAQVMV 490

Query: 477 PISELVSTVKKILQENKE 494
              +LV TV+ IL   K 
Sbjct: 491 DEEQLVQTVQDILAAQKR 508


>gi|126737393|ref|ZP_01753128.1| histidyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126721978|gb|EBA18681.1| histidyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 503

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 234/504 (46%), Positives = 320/504 (63%), Gaps = 19/504 (3%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ + +A  P+GF D   +E+  R+ +L +I  +Y +YGF+ +E+  +E  ++LGKFLP
Sbjct: 5   KKQPRPKAITPKGFRDYFGEEVTQRSEMLRTIAGVYHHYGFEALESSAVETVEALGKFLP 64

Query: 62  DEDRPNKGVFSLQD--------DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
           D DRPN GVF+ Q+          G W++LRYDLTAPLAR  A++ + +  P R Y +GP
Sbjct: 65  DVDRPNAGVFAWQEADEHDPEGKPGDWMALRYDLTAPLARVYAQHRNELPSPYRRYAMGP 124

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+RNEK GPGRFRQF QCD D VG+++  ADAE+CMM++DTLE VGI R DY + +NNRK
Sbjct: 125 VWRNEKPGPGRFRQFYQCDADTVGTASMAADAEICMMLSDTLERVGIPRGDYLVRVNNRK 184

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L+GILE +GL  DD   +R  VLR IDK DK G  GV+ LL +GR D SG +  G  L 
Sbjct: 185 VLNGILEAMGLAEDD--PKRDDVLRTIDKFDKVGEAGVRELLTKGRLDASGAYIDGVGLG 242

Query: 234 SEQIDIMVSFLS---IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
             Q D +++FL+    D+  +M  L   V  +  G +G  EL  I EL+   GY  ++I 
Sbjct: 243 DAQADPVLAFLTSRADDVAGTMQNLRAAVGDSKTGLEGIGELEQIGELLAAGGYGQDQIL 302

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I  +IVRGL YYTG V+EA L F + +EK +   FGSV GGGRYDGLV RF GQ VPA G
Sbjct: 303 IDPSIVRGLGYYTGPVFEAELTFEIFDEKGRKRQFGSVAGGGRYDGLVKRFTGQEVPAVG 362

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL+         K      +     D   ++ YQ     LR AGIRAE++
Sbjct: 363 LSIGVDRLLAALREKGRLDATPKGP----VVVTVMDRARMADYQSMVAELRNAGIRAEVY 418

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD+RN P+A+I+G  E+ +G++QIKDL  G +++ E    E W+E R
Sbjct: 419 LGNPKNFGNQLKYADKRNSPIAVIEGGDEKEKGVIQIKDLILGAKIA-ESATLEEWKE-R 476

Query: 471 VAQITIPISELVSTVKKILQENKE 494
            +Q  +P  +L++ V++IL    E
Sbjct: 477 PSQFEVPRGDLIAKVREILASQDE 500


>gi|90422412|ref|YP_530782.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|122995624|sp|Q21AX3|SYH_RHOPB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|90104426|gb|ABD86463.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 519

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 260/512 (50%), Positives = 340/512 (66%), Gaps = 24/512 (4%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRG AD    E+     ++++IR +YE YGF+P+ETP  E++D+LGKFLP
Sbjct: 6   KKSQKLRARLPRGLADRGPAELAATRAMVETIRAVYERYGFEPVETPAFEFTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D+DRPN+GVFS QDDD QWISLRYDLTAPLARYVAENFD++  P R+YR G V+RNEK G
Sbjct: 66  DQDRPNEGVFSFQDDDEQWISLRYDLTAPLARYVAENFDSLPKPYRSYRNGYVYRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VGS++  ADAEMCMM AD +EA+GI R  Y + +NNRK+LDG++E 
Sbjct: 126 PGRFRQFMQFDADTVGSASPAADAEMCMMAADAMEALGIPRGSYVVKVNNRKVLDGVMES 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSEQI 237
           IGL G++    RL VLRAIDKLD+ G++GVKLLLGEGR D      GDFT GA L+ E  
Sbjct: 186 IGLGGEENAGRRLTVLRAIDKLDRLGIEGVKLLLGEGRWDGGEQGKGDFTIGAQLSPETS 245

Query: 238 DIMVSFLSIDLEKSMHEL-------------YELVKGTIAGEKGFNELVVISELVRKSGY 284
             ++++L + +  +   +              ++V G+  G +G  EL  I  LV  +GY
Sbjct: 246 TPILNYLDLGIRVARDRVESPNRELGIVGYLEQIVSGSETGAQGTTELAQIVRLVEAAGY 305

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
           +  RI+I  ++VRGLEYYTG VYE  L     +EK +PV FGSVGGGGRYDGLVSRF+G+
Sbjct: 306 DDGRIRIDPSVVRGLEYYTGPVYEVELLLDTKDEKGRPVRFGSVGGGGRYDGLVSRFRGE 365

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            VPATGFSIG+SRL  AL  L       +      +     D D ++ YQ     LR   
Sbjct: 366 PVPATGFSIGVSRLQAALTLLGKLDTRPQAGP---VVVTVFDRDRVADYQKMVARLRAEN 422

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR---GMLQIKDLAKGKELSREIK 461
           IRAE++LG+ KN GNQLKYAD+RN P  IIQG+ E++      + +KDL  G EL+   K
Sbjct: 423 IRAELYLGNPKNMGNQLKYADKRNSPCVIIQGSDEKNDPDGAQIIVKDLVLGAELASLEK 482

Query: 462 NNESWREARV-AQITIPISELVSTVKKILQEN 492
           + E + + +  AQ  +P ++LV  V++IL ++
Sbjct: 483 DREEYLQKQAEAQRKVPEADLVDEVRRILAKH 514


>gi|91975769|ref|YP_568428.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91682225|gb|ABE38527.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 531

 Score =  342 bits (877), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 264/524 (50%), Positives = 339/524 (64%), Gaps = 36/524 (6%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRG AD    EI     +++ IR +YE YGF+P+ETP  EY+D+LGKFLP
Sbjct: 6   KKTQKLRARLPRGLADRGPAEIAATRSMVEIIREVYERYGFEPVETPAFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D+DRPN+GVFSLQDDD QWISLRYDLTAPLARYVAENFD +  P R+YR G VFRNEK G
Sbjct: 66  DQDRPNEGVFSLQDDDEQWISLRYDLTAPLARYVAENFDALPKPYRSYRFGWVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAEMCMM ADT+EA+GI R  Y + +NNRK+LDG+LE 
Sbjct: 126 PGRFRQFMQFDADTVGAPTAAADAEMCMMAADTMEALGIPRGSYVVKVNNRKVLDGVLEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSEQI 237
           IGL G++    RL VLRAIDKLDKF +  ++ LLG GR D      GDFTKGA LT EQ+
Sbjct: 186 IGLGGEENAGRRLTVLRAIDKLDKFPITEIEKLLGNGRWDGGEEGKGDFTKGAGLTEEQM 245

Query: 238 DIMVSFLS---------------------------IDLEKSMHELYELVKGTIAGEKGFN 270
             + +++S                              E+ +  L +    +   ++G +
Sbjct: 246 LRIFNYVSFGAVLSTSPGDSNFAGSIQNRNPSELRRSNEEVVSGLKDSFGDSPIAQQGLD 305

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL  I+ L    GY+  RI I  ++VRGLEYYTG VYE  L     ++K +P+ FGSVGG
Sbjct: 306 ELGEIARLATAGGYDQMRILIDPSVVRGLEYYTGPVYEVELLLDTKDDKGRPIRFGSVGG 365

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           GGRYDGLVSRF+G+ VPATGFSIG+SRL  AL+ +          GPV++T    D   +
Sbjct: 366 GGRYDGLVSRFRGEPVPATGFSIGVSRLQAALEIVNRDKPKQPSYGPVVVTVFGGD---I 422

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           + YQ     LR AGIRAE++LG+ K + G Q+KYAD+RN P AIIQG+ E+ RG +QIKD
Sbjct: 423 AGYQKMVSTLRQAGIRAELYLGNPKHSLGQQMKYADKRNSPCAIIQGSDEKERGEVQIKD 482

Query: 450 LAKGKELSREIKNNESWREARV-AQITIPISELVSTVKKILQEN 492
           L  G EL+   K+ E + + +  AQ +  + +LV+ V+ +L  +
Sbjct: 483 LILGAELASLEKDREEYLKKQADAQFSCGVDDLVAKVRDVLARH 526


>gi|126728430|ref|ZP_01744246.1| histidyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126711395|gb|EBA10445.1| histidyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 500

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 230/508 (45%), Positives = 321/508 (63%), Gaps = 25/508 (4%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A+ P+GF D    E+R R  +L  I  +Y  YGF+ +E+  +E  ++LG
Sbjct: 1   MAKVKKAPRPKAQTPKGFRDYFGHEVRERTEMLSKIAGVYHRYGFEALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF+ QD+D  W++LRYDLTAPLAR  AE+ + +  P R + +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFAWQDEDDTWMALRYDLTAPLARVYAEHRNDLPLPYRRFAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGR+RQF QCD D VG+ +  ADAE+C M+ADTLE VGI R DY I +NNRK+L+G
Sbjct: 121 EKPGPGRYRQFYQCDADTVGAPSVAADAEICAMLADTLEEVGIPRGDYLIRVNNRKVLNG 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +L+ +G+  + +      VLR IDK DK G  GV+ LLG+GR D SG +  G  L  EQ 
Sbjct: 181 VLQAMGVTEEGQA---ANVLRTIDKFDKVGESGVRELLGKGRLDASGAYIDGVGLAPEQA 237

Query: 238 DIMVSFLSIDL---EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + +++FL+      ++++  L   V     G +G +EL  I++L+   GY  +RI I  +
Sbjct: 238 EPVLAFLTSKGATNDETLANLRNAVGEAPVGAEGVDELAEIADLLAAQGYGPDRIVIDPS 297

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL YYTG V+EA L F +++EK +   FGSV GGGRYD LV RF GQ VPATG SIG
Sbjct: 298 VVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVAGGGRYDDLVKRFTGQVVPATGVSIG 357

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG---------- 404
           + RL+ AL+       +        +     D D ++ YQ     LR A           
Sbjct: 358 VDRLLAALREKGRIVGSETG----PVVVTVMDRDRMADYQAMVAELRQADIDPKDPSKGK 413

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           IRAE++LG+ KNFGNQLKYAD+RN P+AII+G  E++RG++QIKDL  G +++ E  + E
Sbjct: 414 IRAEVYLGNPKNFGNQLKYADKRNSPVAIIEGGDEKARGVVQIKDLILGAKIA-ENASLE 472

Query: 465 SWREARVAQITIPISELVSTVKKILQEN 492
            W+E R +Q  +   +LV+ V++IL+  
Sbjct: 473 EWKE-RPSQYEVARGDLVAKVREILEGQ 499


>gi|27382568|ref|NP_774097.1| histidyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|32130100|sp|Q89DI2|SYH_BRAJA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|27355740|dbj|BAC52722.1| histidyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 506

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 262/499 (52%), Positives = 337/499 (67%), Gaps = 11/499 (2%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRG  D     IR    +++ IR +YE YGF+P+ETP +EY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGLEDRDPAAIRATREMVEKIRAVYELYGFEPVETPAMEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG--PVFRNEK 119
           D+DRPN+GVFS QDDD QWISLRYDLTAPLARYV E + T              VFRNEK
Sbjct: 66  DQDRPNEGVFSFQDDDEQWISLRYDLTAPLARYVGERYGTDGLVLPYRSYRVGYVFRNEK 125

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VGS+   ADAE+CMM ADT+EA+G++R  Y + +NNRK+LDG+L
Sbjct: 126 PGPGRFRQFMQFDADTVGSATPAADAEICMMAADTMEALGVQRGQYVVKVNNRKVLDGVL 185

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSE 235
           E IGL GD+    RL VLRAIDKLDKF    V+ LLG GR D      GDFTKGANL++ 
Sbjct: 186 EAIGLAGDENAARRLTVLRAIDKLDKFPADEVRKLLGPGRWDGGEEGKGDFTKGANLSAA 245

Query: 236 QIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           + D++++      D ++++      +  +  G+ G +EL  I++LV  SGY ++RIKI  
Sbjct: 246 EADVVLAITKPRDDWKEAIAAAEAYLAKSEVGQAGVSELEEIAKLVMASGYGADRIKIDP 305

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           ++VRGLEYYTG VYE  L     +EK +PV FGSVGGGGRYDGLVSRF+G+ VPATGFSI
Sbjct: 306 SVVRGLEYYTGPVYEVELLLDTKDEKGRPVRFGSVGGGGRYDGLVSRFRGEPVPATGFSI 365

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+SRL  AL  L              +     D D ++ YQ     LRTAGIRAE++LG+
Sbjct: 366 GVSRLQAALTLLGKLD---TRPEFGPVVVTVFDRDRVADYQKMVASLRTAGIRAELYLGN 422

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            KN GNQLKYADRRN P  IIQG+ E++RG LQIKDL +G + +  I +N+ WRE+R AQ
Sbjct: 423 PKNMGNQLKYADRRNSPCVIIQGSDEKARGELQIKDLIEGAKAAAAIASNQEWRESRPAQ 482

Query: 474 ITIPISELVSTVKKILQEN 492
            +   ++LV+ V+++L  +
Sbjct: 483 FSCAEADLVAKVREVLARH 501


>gi|153010340|ref|YP_001371554.1| histidyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151562228|gb|ABS15725.1| histidyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 529

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 277/525 (52%), Positives = 354/525 (67%), Gaps = 32/525 (6%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K++A LPRGF D    ++R   +++ +IR +Y+ YGF+P+ETPL+EY+D+LGKF
Sbjct: 1   MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRPN+GVFS QDDD QW+SLRYDLTAPLAR+VAEN++++  P R+YR G VFRNEK
Sbjct: 61  LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARFVAENYESLPKPYRSYRNGWVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+   +ADAEMCMMMADT+E +GI R DY I +NNRK+LDG+L
Sbjct: 121 PGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTMERLGISRGDYAIRVNNRKVLDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + IGL G+    +RL VLRAIDKLDKFG +GV+LLLGEGR D SGDFTKGANL  EQI  
Sbjct: 181 DAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGEGRLDESGDFTKGANLDDEQIKR 240

Query: 240 MVSFL--------SIDLEKSMHELYELVK---------------------GTIAGEKGFN 270
           M++F+         I   K++  ++                          +    +G  
Sbjct: 241 MMNFITVAARDYDDISQRKAIDPVFPYFSPEGGEPIGKTLLQAIRESDFNKSSIMLEGLK 300

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL  I +L   +GY+  RI I  + VRGLEYYTG V+EA L F V NE  + VVFGSVGG
Sbjct: 301 ELEDIRDLAIAAGYDDGRIIIDPSCVRGLEYYTGPVFEAELQFDVTNEDGQKVVFGSVGG 360

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           GGRYDGLVSRF+G+ VPATG SIG+SRL+ ALK+L     +      V+   MD D++SL
Sbjct: 361 GGRYDGLVSRFRGEPVPATGISIGVSRLMTALKNLGKLDVSDVVGPVVV-LVMDRDTESL 419

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
            +YQ     LR A IRAEM++G S     Q+KYADRR  P  IIQG+ ER  G +QIKDL
Sbjct: 420 GRYQKMVSDLRQASIRAEMYVGGSG-MKAQMKYADRREAPCVIIQGSQEREAGEVQIKDL 478

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
            +GK LS EI++N +WRE+R AQIT   + L+  V++IL     +
Sbjct: 479 VEGKRLSAEIEDNVTWRESRPAQITAKENGLIDAVREILVSQARD 523


>gi|312115091|ref|YP_004012687.1| histidyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220220|gb|ADP71588.1| histidyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 473

 Score =  341 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 237/495 (47%), Positives = 317/495 (64%), Gaps = 28/495 (5%)

Query: 2   GKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            K +K  ++A LP+G  D   +E+R    +L +I  +YE YGF+P++TP  EY+D+LGKF
Sbjct: 4   KKPSKTQVKARLPKGMRDVEAQELRALKHMLGTISEVYERYGFEPLDTPAFEYTDALGKF 63

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN+GVFS QD+D QW+S+RYDLTAPLARYVA+NFD    P R Y+ G V+RNEK
Sbjct: 64  LPDTDRPNEGVFSFQDEDEQWVSMRYDLTAPLARYVAQNFDATPKPFRRYQTGYVYRNEK 123

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG++   ADAEMCM+ ADTLEA+G+    Y I +++R +LD +L
Sbjct: 124 PGPGRFRQFMQFDADTVGTANPAADAEMCMLAADTLEALGL-GGSYIIKVSSRTLLDTVL 182

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +  G+    K   RL+VLRA+DK D+ G+ GV  LLG+GR D SGDFT GA+L   Q + 
Sbjct: 183 DAAGIDDQKK---RLVVLRAVDKFDRLGVPGVSDLLGKGRKDESGDFTPGADLAPAQANA 239

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +++ L+ +                        +  I ELVR +G+  +RI+   T+VRGL
Sbjct: 240 VLALLTGEAP------------------SDAAIATIIELVRGAGFGEDRIRFDPTVVRGL 281

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           EYYTG V+EA L FP  +E  + V FGSVGGGGRYDGLVSRF+ Q VPATGFSIG+SRL 
Sbjct: 282 EYYTGPVFEAELTFPATDESGQAVRFGSVGGGGRYDGLVSRFRSQPVPATGFSIGVSRLY 341

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            AL  L              +  +  D   +  YQ   + LR A IRAEM++G +     
Sbjct: 342 AALSHLGKIDAAKAAGP---VVVLVMDKARVGDYQRMAKQLRDADIRAEMYVGEAG-MKA 397

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           Q+KYAD+R  P  IIQG  ER++G + IKDL +G  LS EI ++  W+EAR AQ ++   
Sbjct: 398 QMKYADKRGSPCVIIQGEDERAKGEVTIKDLLEGSRLSGEISDHAEWKEARPAQFSVSED 457

Query: 480 ELVSTVKKILQENKE 494
           +LV+ V+K+L E  +
Sbjct: 458 DLVAAVQKLLAEQAK 472


>gi|119384659|ref|YP_915715.1| histidyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|166228591|sp|A1B3C5|SYH_PARDP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|119374426|gb|ABL70019.1| histidyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 494

 Score =  341 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 230/497 (46%), Positives = 317/497 (63%), Gaps = 18/497 (3%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ + +AE P+GF D    ++  R ++LD I  IY  +GF+P+ET  +E  ++LGKFLP
Sbjct: 6   KKQPRPKAETPKGFRDYFGADVTERKQMLDRIAQIYHRHGFEPLETSAVETVEALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDD------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
           D DRPN GVF+ Q+ +      G W++LRYDLTAPLAR  A+    +  P R Y +GPV+
Sbjct: 66  DVDRPNAGVFAWQEAEVPGGGAGDWLALRYDLTAPLARVAAQFRGDLPSPYRRYAMGPVW 125

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           RNEK GPGRFRQF QCD D VGS++  ADAE+C M+A  LE  GI+R DY I INNRK+L
Sbjct: 126 RNEKPGPGRFRQFYQCDADTVGSASVAADAEICAMLAAALEHAGIRRGDYLIRINNRKVL 185

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           +GILE +G+      ++   VLR IDK DK G QGV+ LL  GR D SG F +G  L+ E
Sbjct: 186 NGILESMGVAEGKPADD---VLRTIDKFDKVGEQGVRQLLTTGRKDESGAFIEGVGLSPE 242

Query: 236 QIDIMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
           Q + +++FL     D   ++  L   V  +  G +G  EL  I+ ++   G    R  + 
Sbjct: 243 QAEPVLAFLTSKGADNAGTLANLRAAVGASATGAEGVEELAQIARMLAAMGVGEERAIVD 302

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            +IVRGL YYTG V+EA L F ++++K +   FGSV GGGRYDGLV RF GQ VPATG S
Sbjct: 303 PSIVRGLGYYTGPVFEAELTFEILDDKGRKRQFGSVAGGGRYDGLVERFTGQKVPATGVS 362

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG+ RL+ AL++        +      +     D + ++ YQ     LR AGIRAE++LG
Sbjct: 363 IGVDRLLAALRAKGLMGGTEQG----PVVVTVMDRERMADYQAMAAELRAAGIRAEVYLG 418

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + KNFGNQLKYAD+RN P+AIIQG  E +RG++Q+KDL  G +++ E  ++E W+ A+ A
Sbjct: 419 NPKNFGNQLKYADKRNAPVAIIQGGDEAARGVVQVKDLVLGAKIAAE-ASHEEWK-AQPA 476

Query: 473 QITIPISELVSTVKKIL 489
           Q  +  ++LV+ V++IL
Sbjct: 477 QTEVARADLVAEVRRIL 493


>gi|300024081|ref|YP_003756692.1| histidyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525902|gb|ADJ24371.1| histidyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 531

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 256/520 (49%), Positives = 336/520 (64%), Gaps = 44/520 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            L +GF D    E+R  N ++  IR +YE YGF  +ETP +EY+D+LGKFLPD+DRPN G
Sbjct: 21  RLAKGFRDIEAAELRGLNEMIAKIREVYERYGFQALETPAIEYTDALGKFLPDQDRPNAG 80

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           VFS QD+D QW+SLRYDLTAPLARYVA+NF  +  P R Y  G V+RNEK GPGRFRQF+
Sbjct: 81  VFSFQDEDEQWMSLRYDLTAPLARYVAQNFQVLPKPFRRYAFGNVYRNEKPGPGRFRQFM 140

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q D D VG+ +  ADAEMCM+ ADTLEA+G+KR DY I +NNRK+LDG+L   G+  D +
Sbjct: 141 QFDADTVGAESVAADAEMCMLAADTLEALGVKRGDYVIKVNNRKLLDGVLNSAGVLPDQR 200

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-- 247
           L     VLRA+DKLD+ G++GV+ LLG+GRTD SGDFTKGA L  +QI+I+    +    
Sbjct: 201 L----TVLRAVDKLDRLGVKGVRELLGKGRTDESGDFTKGAGLDEKQIEILEKLYAHQEN 256

Query: 248 ---------------------------------LEKSMHELYELVKGTIAGEKGFNELVV 274
                                              + +     +   + +  +G  EL  
Sbjct: 257 STQDFFLAEHRLDDASDDDRIMVSDSGHKFVFAHPRFLDTYASVFADSPSALEGIEELRQ 316

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           IS LVR++GY + RIK+  ++VRGLEYYTG V EA L F V  +  KPV FGSVGGGGRY
Sbjct: 317 ISSLVRRAGYGTKRIKLDVSVVRGLEYYTGPVLEAELTFEVKGDDGKPVRFGSVGGGGRY 376

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D LV+RF G  VPATGFSIG+SRL  AL  +       K +GPV++  MD     +++YQ
Sbjct: 377 DDLVARFTGDKVPATGFSIGVSRLQAALSLIG--DKKTKALGPVVVLVMDKGE--IARYQ 432

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             TQ LR AGIRAEM+LGSS     Q+KYAD+RN P AIIQG+ ER++G + IKDL +G 
Sbjct: 433 KITQDLRNAGIRAEMYLGSSG-MKAQMKYADKRNAPCAIIQGSDERAKGEVTIKDLIEGA 491

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           + +  IK+N+ W+ AR AQ ++  + L+  VKK++  +++
Sbjct: 492 KAAAAIKDNKEWKAARPAQFSVSEANLIDEVKKLVALHQD 531


>gi|84514322|ref|ZP_01001686.1| histidyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84511373|gb|EAQ07826.1| histidyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 492

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 241/495 (48%), Positives = 320/495 (64%), Gaps = 10/495 (2%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ + +A  P+GF D    ++  R  +L  I  +Y+ YGFD +ET  +E  ++LGKFLP
Sbjct: 5   KKQPRPKAVTPKGFQDYFGADVTERAAMLAKIAAVYDRYGFDALETSAVETVEALGKFLP 64

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVF+ Q +D  W++LRYDLTAPLAR  A+  + +  P R Y +GPV+RNEK G
Sbjct: 65  DVDRPNEGVFAWQ-EDADWLALRYDLTAPLARVAAQYRNDLPSPYRRYAMGPVWRNEKPG 123

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF QCD D VG+++  ADAE+C M+AD LE VGI R DY I +NNRK+L+G+LE 
Sbjct: 124 PGRFRQFYQCDADTVGAASVAADAEICAMLADCLEEVGIARGDYVIRVNNRKVLNGVLEV 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            GL GDD   ER IVLRAIDKLD+ G+ GV+ LLGEGR D SGDFTKGA L+  Q D+++
Sbjct: 184 AGLSGDDTEAERGIVLRAIDKLDRLGVAGVRALLGEGRKDESGDFTKGAGLSQAQADVVI 243

Query: 242 SFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            F+         ++  L ELV G+  G  G  EL  I+ L+   GY  +RI I  ++VRG
Sbjct: 244 GFMEAKRDTGAATVARLAELVAGSPIGVAGVAELDEIAGLLSAQGYGPDRIVIDPSVVRG 303

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L YYTG V+EA L F V +EK +P  FGSV GGGRYD LV RF GQ VPATG SIG+ RL
Sbjct: 304 LGYYTGPVFEAELTFEVTDEKGRPRNFGSVAGGGRYDDLVKRFTGQEVPATGVSIGVDRL 363

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           + AL++       I       +     D   ++ YQ     LR AGIR+E++LG+ KNFG
Sbjct: 364 LAALRATGR----ITSASAGPVIVTVMDRAHMADYQSMVAELRKAGIRSEVYLGNPKNFG 419

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           NQLKYAD+R  P+AII G  E ++G++QIKDL  G ++++     E W+  R +Q  +  
Sbjct: 420 NQLKYADKRASPVAIIAGGDEFAKGVVQIKDLILGAQIAKN-ATLEEWK-DRPSQYEVSR 477

Query: 479 SELVSTVKKILQENK 493
            ++V+ V+ IL    
Sbjct: 478 EQMVARVRAILDGQG 492


>gi|255264594|ref|ZP_05343936.1| histidyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106929|gb|EET49603.1| histidyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 496

 Score =  339 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 244/502 (48%), Positives = 331/502 (65%), Gaps = 16/502 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K+ K    +A+ P+GF D    ++  R+ +L  I  +Y+ YGFD +ET  +E  ++LG
Sbjct: 1   MAKQKKQPRPKAQTPKGFRDYFGADVTERSEMLSKISAVYQRYGFDALETSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF+ Q+DD  W++LRYD+TAPLAR  A+  + +  P R Y +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFAWQEDDSDWVALRYDMTAPLARVYAQFQNDLPKPYRRYAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VG+++  ADAE+C M++DTLE VGI R DY + +NNRK+L+G
Sbjct: 121 EKPGPGRFRQFYQCDADTVGATSVAADAEICAMLSDTLEEVGIARGDYIVRVNNRKVLNG 180

Query: 178 ILEKIGLHGDDKLNERL----IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           ++E  G+       +      IVLRAIDKLD+ G+ GV+ LLG+GR D SGDFT GA LT
Sbjct: 181 VMEVAGVLDPSDPTKFEAERGIVLRAIDKLDRLGVDGVRALLGKGRKDASGDFTDGAGLT 240

Query: 234 SEQIDIMVSFLS---IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
             Q D+++ F+        +++  L EL  G+  G  G +EL  I+ L+   GY+++RI 
Sbjct: 241 GSQADVVMGFMDARRDTGAETVARLRELTTGSKIGNDGVDELETIATLLAAQGYDADRIV 300

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           +  ++VRGL YYTG VYEA L F + +EK +   FGSV GGGRYD LV RF GQ VPATG
Sbjct: 301 MDPSVVRGLGYYTGPVYEAELTFDIKDEKGRLRQFGSVAGGGRYDDLVKRFTGQEVPATG 360

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL+         K +GPV++T MD D   ++ YQ     LRTAGIRAE++
Sbjct: 361 VSIGVDRLLAALRMQ--RPETEKPLGPVVVTVMDRD--RMADYQTMVTELRTAGIRAEVY 416

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD RN P+AIIQG  E + G +QIKDL  G E++ +    E W+  +
Sbjct: 417 LGNPKNFGNQLKYADTRNSPVAIIQGGDEHAAGEIQIKDLILGAEIA-KTATVEEWK-GQ 474

Query: 471 VAQITIPISELVSTVKKILQEN 492
            AQ T+   +LV+ V++IL   
Sbjct: 475 PAQFTVARGDLVAKVREILDAQ 496


>gi|221369556|ref|YP_002520652.1| histidyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254782342|sp|B9KU51|SYH_RHOSK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|221162608|gb|ACM03579.1| Histidyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 494

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 236/500 (47%), Positives = 325/500 (65%), Gaps = 16/500 (3%)

Query: 1   MGKKT---KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K     + RAE P+GF D    ++  R  +LD++  +Y  YGFDP+ET  +E  ++LG
Sbjct: 1   MAKDKASRRPRAETPKGFRDYFGADVTERKAMLDAVAEVYHRYGFDPLETSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF  QD+DG W++LRYDLTAPLAR  A+  + +  P R Y +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFGWQDEDGDWLALRYDLTAPLARVAAQFRNDLPSPYRRYAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VGS++  ADAE+C M++D LE VGI R DY + +NNRK+L+G
Sbjct: 121 EKPGPGRFRQFYQCDADTVGSASVAADAEICAMLSDALEVVGIPRGDYIVRVNNRKVLNG 180

Query: 178 ILEKIGL----HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           ++E  G+           ER IVLRAIDK+D+ G  GV+ LLG GR D SGDFTKGA L+
Sbjct: 181 VMEVAGVLDPSDPAKFEAERGIVLRAIDKIDRLGKTGVRALLGAGRKDESGDFTKGAGLS 240

Query: 234 SEQIDIMVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            EQ ++++ F++        +   L ELV  +  G +G  EL  I+EL+   GY  +RI 
Sbjct: 241 DEQAEVVMGFMAAKRDTGAATAARLRELVGASTLGCEGVQELETIAELLDAQGYGPDRIV 300

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           +  ++VRGL YYTG V+EA L F +++EK +   FGSV GGGRYD LV RF GQ+VPATG
Sbjct: 301 VDPSVVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVAGGGRYDDLVKRFTGQSVPATG 360

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL++   +    +      +     D D +  Y      LR AG+RAE++
Sbjct: 361 VSIGVDRLLAALRAKGRAGAEAQG----PVVVTVMDRDRMGDYMAMVGELRRAGLRAELY 416

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD R  P+A+IQG+ E +RG++ +KDL  G +++    + E W+ +R
Sbjct: 417 LGNPKNFGNQLKYADARKSPVAVIQGSDEATRGVVVLKDLVLGAQIAAG-ASLEEWK-SR 474

Query: 471 VAQITIPISELVSTVKKILQ 490
            AQ+ +P ++LV  V+ +L 
Sbjct: 475 PAQVEVPRADLVRAVQDMLS 494


>gi|77465550|ref|YP_355053.1| histidyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|123590104|sp|Q3IWD2|SYH_RHOS4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|77389968|gb|ABA81152.1| histidyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 494

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 236/500 (47%), Positives = 325/500 (65%), Gaps = 16/500 (3%)

Query: 1   MGKKT---KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K     + RAE P+GF D    ++  R  +LD++  +Y  YGFDP+ET  +E  ++LG
Sbjct: 1   MAKDKASRRPRAETPKGFRDYFGADVTERKAMLDAVAEVYHRYGFDPLETSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF  QD+DG W++LRYDLTAPLAR  A+  + +  P R Y +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFGWQDEDGDWLALRYDLTAPLARVAAQFRNDLPSPYRRYAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VGS++  ADAE+C M++D LE VGI R DY + +NNRK+L+G
Sbjct: 121 EKPGPGRFRQFYQCDADTVGSASVAADAEICAMLSDALEVVGIPRGDYIVRVNNRKVLNG 180

Query: 178 ILEKIGL----HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           ++E  G+           ER IVLRAIDK+D+ G  GV+ LLG GR D SGDFTKGA L+
Sbjct: 181 VMEVAGVLDPSDPAKFEAERGIVLRAIDKIDRLGETGVRALLGSGRKDESGDFTKGAGLS 240

Query: 234 SEQIDIMVSFLS---IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            EQ ++++ F++        +   L ELV  +  G +G  EL  I+EL+   GY  +RI 
Sbjct: 241 DEQAEVVMGFMAARRDTGAATAARLRELVGASTLGCEGVQELETIAELLDVQGYGPDRIV 300

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           +  ++VRGL YYTG V+EA L F +++EK +   FGSV GGGRYD LV RF GQ+VPATG
Sbjct: 301 VDPSVVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVAGGGRYDDLVKRFTGQSVPATG 360

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL++   +    +      +     D D +  Y      LR AG+RAE++
Sbjct: 361 VSIGVDRLLAALRAKGRAGAEAQG----PVVVTVMDRDRMGDYMAMVGELRRAGLRAELY 416

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD R  P+A+IQG+ E +RG++ +KDL  G +++    + E W+ +R
Sbjct: 417 LGNPKNFGNQLKYADARKSPVAVIQGSDEAARGVVVLKDLVLGAQIAAG-ASLEEWK-SR 474

Query: 471 VAQITIPISELVSTVKKILQ 490
            AQ+ +P ++LV  V+ +L 
Sbjct: 475 PAQVEVPRADLVRAVQDMLS 494


>gi|332561222|ref|ZP_08415540.1| histidyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332275020|gb|EGJ20336.1| histidyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 494

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 236/500 (47%), Positives = 325/500 (65%), Gaps = 16/500 (3%)

Query: 1   MGKKT---KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K     + RAE P+GF D    ++  R  +LD++  +Y  YGFDP+ET  +E  ++LG
Sbjct: 1   MAKDKASRRPRAETPKGFRDYFGADVTERKAMLDAVAEVYHRYGFDPLETSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF  QD+DG W++LRYDLTAPLAR  A+  + +  P R Y +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFGWQDEDGDWLALRYDLTAPLARVAAQFRNDLPSPYRRYAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VGS++  ADAE+C M++D LE VGI R DY + +NNRK+L+G
Sbjct: 121 EKPGPGRFRQFYQCDADTVGSASVAADAEICAMLSDALEVVGIPRGDYIVRVNNRKVLNG 180

Query: 178 ILEKIGL----HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           ++E  G+           ER IVLRAIDK+D+ G  GV+ LLG GR D SGDFTKGA L+
Sbjct: 181 VMEVAGVLDPSDPAKFEAERGIVLRAIDKIDRLGEAGVRALLGAGRKDESGDFTKGAGLS 240

Query: 234 SEQIDIMVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            EQ ++++ F++        +   L ELV  +  G +G  EL  I+EL+   GY  +RI 
Sbjct: 241 DEQAEVVMGFMAAKRGTGAATAARLRELVGASTLGCEGVQELETIAELLDVQGYGPDRIV 300

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           +  ++VRGL YYTG V+EA L F +++EK +   FGSV GGGRYD LV RF GQ+VPATG
Sbjct: 301 VDPSVVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVAGGGRYDDLVKRFTGQSVPATG 360

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL++   +    +      +     D D +  Y      LR AG+RAE++
Sbjct: 361 VSIGVDRLLAALRAKGRAGAEAQG----PVVVTVMDRDRMGDYMTMVGELRRAGLRAELY 416

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD R  P+A+IQG+ E +RG++ +KDL  G +++    + E W+ +R
Sbjct: 417 LGNPKNFGNQLKYADARKSPVAVIQGSDEAARGVVVLKDLVLGAQIAAG-ASLEEWK-SR 474

Query: 471 VAQITIPISELVSTVKKILQ 490
            AQ+ +P ++LV  V+ +L 
Sbjct: 475 PAQVEVPRADLVRAVQDMLS 494


>gi|84500127|ref|ZP_00998393.1| histidyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84392061|gb|EAQ04329.1| histidyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 494

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 232/499 (46%), Positives = 319/499 (63%), Gaps = 19/499 (3%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K+ K    RA  P+GF D    ++  R+ +L  I  +Y  YGFD +E+  +E  ++LG
Sbjct: 1   MAKQKKTPRPRAVTPKGFRDYFGTDVTERSEMLSRIAGVYHRYGFDALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
           KFLPD DRPN+GVF+ Q    D  G W++LRYDLTAPLAR  A++ + +  P R Y +GP
Sbjct: 61  KFLPDVDRPNEGVFAWQEDDEDGKGDWLALRYDLTAPLARVYAQHRNDLPTPYRRYAMGP 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+RNEK GPGRFRQF QCD D VG+++  ADAE+C M+AD LE VGI R DY + +NNRK
Sbjct: 121 VWRNEKPGPGRFRQFYQCDADTVGTASVAADAEICAMLADCLEEVGIPRGDYVVRVNNRK 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L+G+LE +G+     + ++  VLR IDK DK G  GV+ LLG+GR D SG +  G  L 
Sbjct: 181 VLNGVLEAMGVSD---MAQQANVLRTIDKFDKVGEAGVRQLLGKGRLDASGAYIDGVGLA 237

Query: 234 SEQIDIMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            +Q + +++FL     D  +++  L   V     G +G +EL  I++L+  +GY  +RI 
Sbjct: 238 PDQAEPVIAFLTSKGADAAETIANLRTAVGAATMGPEGVDELEEIADLLAAAGYGPDRIV 297

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I  ++VRGL YYTG V+EA L F + ++K +P  FGSV GGGRYD LV+RF GQ VPA G
Sbjct: 298 IDPSVVRGLGYYTGPVFEAELTFEITDDKGRPRQFGSVAGGGRYDDLVARFTGQKVPAVG 357

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL+         +      +     D D +  YQ     LR AGIRAE++
Sbjct: 358 VSIGVDRLLAALREKGRVGGESEGP----VVVTVMDRDRMDDYQAMVAELRNAGIRAEVY 413

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYADRRN P A+I+G  E++RG++Q+KDL  GK+++ E    E W+E R
Sbjct: 414 LGNPKNFGNQLKYADRRNSPAAVIEGGEEKARGVVQVKDLILGKKIA-ESATLEEWKE-R 471

Query: 471 VAQITIPISELVSTVKKIL 489
            +Q  IP  +LVS + K+L
Sbjct: 472 PSQAEIPRDQLVSHIWKLL 490


>gi|148253270|ref|YP_001237855.1| histidyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146405443|gb|ABQ33949.1| histidyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 544

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 260/537 (48%), Positives = 325/537 (60%), Gaps = 49/537 (9%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ KL+A LPRG  D     I     +++ IR +YE YGF+P+ETP  EY+D+LGKFLP
Sbjct: 6   KKQQKLKARLPRGLEDRGPAAIAATREMVEKIRAVYERYGFEPVETPAFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP--VFRNEK 119
           D+DRPN+GVFS QDDD QWISLRYDLTAPLARYV E + T              VFRNEK
Sbjct: 66  DQDRPNEGVFSFQDDDEQWISLRYDLTAPLARYVGERYGTDGLVLPYRSYRSGYVFRNEK 125

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VGS++  ADAEMCMM ADT+EA+GI R  Y + +NNRK+LDGIL
Sbjct: 126 PGPGRFRQFMQFDADTVGSASPAADAEMCMMAADTMEALGIARGQYVVKVNNRKVLDGIL 185

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSE 235
           E IGL GD+    RL VLRAIDKLDKF    ++ LLG GR D      GDFTKGA L  E
Sbjct: 186 ESIGLGGDENAGRRLTVLRAIDKLDKFPASEIEKLLGSGRWDGGEEGKGDFTKGAGLDKE 245

Query: 236 QIDIMV----------------------------------------SFLSIDLEKSMHEL 255
           QID ++                                        S+     +  +  L
Sbjct: 246 QIDKVLVFALLQEGNFTELEDVTNVPPGTRQERGSVMTFSTVDGSKSYFVESNKGVIDGL 305

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
                       G  EL  IS+L   +GY+ NR++I  ++VRGLEYYTG VYE  L    
Sbjct: 306 MTHFGSNETSRAGIEELKQISDLAESAGYDRNRVRIDPSVVRGLEYYTGPVYEVELLLET 365

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
            +EK +PV FGSVGGGGRYDGLVSRF+G+ VPATGFSIG+SRL  AL  L          
Sbjct: 366 KDEKGRPVRFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLQAALTLLGKLDTKPAFG 425

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
               +     D + ++ YQ    +LR  GIRAE++LG+ KN GNQLKYADRRN P  IIQ
Sbjct: 426 P---VVVTVFDRERVADYQKMVSILRNHGIRAELYLGNPKNMGNQLKYADRRNAPCVIIQ 482

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           G+ E++RG +QIKDL +G + +  I +N+ WRE+R AQ +    ELV+ V+++L  +
Sbjct: 483 GSDEKARGEVQIKDLIEGAKAAAAIASNQEWRESRPAQFSAKEDELVAAVREVLARH 539


>gi|86136289|ref|ZP_01054868.1| histidyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85827163|gb|EAQ47359.1| histidyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 499

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 230/506 (45%), Positives = 323/506 (63%), Gaps = 22/506 (4%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A  P+GF D   +E+  R+ +L +I  +Y +YGF+ +E+  +E  +SLG
Sbjct: 1   MAKIKKQPRPKAVTPKGFRDYFGEEVTQRSEMLRAIAGVYHHYGFEALESSAVETVESLG 60

Query: 58  KFLPDEDRPNKGVFSLQ-----DDD---GQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
           KFLPD +RPN GVF+ Q     D D   G W++LRYDLTAPLAR  A++ + +  P R Y
Sbjct: 61  KFLPDVERPNAGVFAWQEVDEHDPDSNKGDWMALRYDLTAPLARVYAQHRNDLPTPYRRY 120

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
            +GPV+RNEK GPGR+RQF QCD D VG+++  ADAE+CMM++DTLE VGI R DY + +
Sbjct: 121 AMGPVWRNEKPGPGRYRQFYQCDADTVGTASMAADAEICMMLSDTLETVGIPRGDYLVRV 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           NNRK+++G+LE +GL  D    + +  LR IDK DK G  GV+ LL +GR D SG +  G
Sbjct: 181 NNRKVMNGVLEVMGLGDDQAAKDNV--LRTIDKFDKVGEAGVRELLTKGRLDASGAYIDG 238

Query: 230 ANLTSEQIDIMVSFLSIDLE---KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
             L+ +Q++ +++FL+   +   K+   L   V  +  G +G  EL  I +L+   GY S
Sbjct: 239 VGLSDDQVEPVLAFLTSKADNTAKTFENLRAAVGASKVGAEGIGELEQIGDLMAAGGYGS 298

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
           +RI+I  +IVRGL YYTG VYEA L F +++++ +   FGSV GGGRYD LV RF GQ V
Sbjct: 299 DRIEIDPSIVRGLGYYTGPVYEAELTFDILDDQGRKRQFGSVSGGGRYDDLVKRFTGQEV 358

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           PATG SIG+ RL+ AL+                +     D   ++ YQ     LR AGIR
Sbjct: 359 PATGLSIGVDRLLAALREKGRL----SATPTGPVVVTVMDKARMADYQTMVAELRNAGIR 414

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE++LG+ KNFGNQLKYADRRN P+A+I+G  E++ G++QIKDL  G +++ E    E W
Sbjct: 415 AEVYLGNPKNFGNQLKYADRRNSPVAVIEGGDEKAAGVIQIKDLILGAKIA-ESATLEEW 473

Query: 467 REARVAQITIPISELVSTVKKILQEN 492
           +E R +Q  +P  +LV+ V++IL+  
Sbjct: 474 KE-RPSQFEVPRGDLVAKVREILESQ 498


>gi|319406171|emb|CBI79808.1| Histidyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 498

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 266/495 (53%), Positives = 356/495 (71%), Gaps = 6/495 (1%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           + + +A LPRGF D    ++     ++  IR +YE YGF+ +ETP+ EY+D LGKFLPD 
Sbjct: 5   QERTKARLPRGFIDRTGAQLYAIETMIAQIREVYELYGFEALETPIFEYTDVLGKFLPDS 64

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
           DRPN GVFSLQDDD QW+SLRYDLTAPLARY +ENF+T+  P R+YR G VFRNEK GPG
Sbjct: 65  DRPNAGVFSLQDDDEQWMSLRYDLTAPLARYFSENFETLPKPYRSYRYGVVFRNEKPGPG 124

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           RFRQF+Q D D VG+    ADAE+CM+ AD+LE +GI++ DY I +NNRKILDG+LE +G
Sbjct: 125 RFRQFMQFDADIVGAPTVLADAEICMIAADSLEKLGIQQKDYVIRLNNRKILDGVLELVG 184

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           L G ++   RL VLRAIDKLDKFG +GV+LLLGEGR D SGDFTKGA L  ++I+ +++ 
Sbjct: 185 LGGKEQEGRRLTVLRAIDKLDKFGSEGVRLLLGEGRLDESGDFTKGAGLKKKEIECILAL 244

Query: 244 LSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +++     E+++  L ++V  +  G +G  EL  +  +  ++GY    IKI  ++VRGLE
Sbjct: 245 MAVSAETAEETISNLKKMVGHSAQGFEGICELEEMHAIFSENGYQQC-IKIDPSVVRGLE 303

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA L F + N+  + VVFGSVGGGGRYDGLV+RF+G+NVPATGFSIG+SRLI 
Sbjct: 304 YYTGPVFEAALLFDIFNDDGQKVVFGSVGGGGRYDGLVARFRGENVPATGFSIGVSRLIS 363

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL++L       + +GPV++  MD + ++L +YQ     LR AGIR+E++LG+S     Q
Sbjct: 364 ALQNLGKLPVK-ETIGPVVVLMMDKEPEALVRYQKMVMRLRQAGIRSELYLGASG-IKAQ 421

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           +KYADRR+ P  +IQG  ER  G +QIKDL +G  LS EIK+N++WRE+R AQ+T+   +
Sbjct: 422 MKYADRRHAPCVVIQGGQERQEGKVQIKDLIEGARLSHEIKDNQTWRESRPAQVTVDEDQ 481

Query: 481 LVSTVKKILQENKEE 495
           LV TV+ IL   K +
Sbjct: 482 LVQTVQNILITQKSQ 496


>gi|146342858|ref|YP_001207906.1| histidyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146195664|emb|CAL79691.1| histidyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 546

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 265/539 (49%), Positives = 336/539 (62%), Gaps = 51/539 (9%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRG  D     I     +++ IR +YE YGF+P+ETP  EY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGLEDRGPAAIAATREMVEKIRAVYERYGFEPVETPAFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D+DRPN+GVFS QDDD QWISLRYDLTAPLARYVAENFD +  P R+YR G VFRNEK G
Sbjct: 66  DQDRPNEGVFSFQDDDEQWISLRYDLTAPLARYVAENFDALPKPYRSYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VGS +  ADAEMCMM ADT+EA+GI R DY + +N+RK+LDG LE 
Sbjct: 126 PGRFRQFMQFDADTVGSGSPAADAEMCMMAADTMEALGIARGDYAVKVNSRKLLDGALES 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL GDD    RL VLRA+DK D+ G +GV+ LLG GR D SGDFTKGA L  + I  ++
Sbjct: 186 IGLGGDDNAGRRLAVLRALDKYDRLGDRGVRELLGPGRKDESGDFTKGAGLIEDDITQIM 245

Query: 242 SFLSIDLE-----KSMHELYE--------------------------------------- 257
               +  +       + E  +                                       
Sbjct: 246 GLFELTPQSASDFDHLSEWEKQESSYVEVNFDQRRGHLVREIHSDFAPGRLPINNLATIK 305

Query: 258 ----LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                   +    +G +EL  I++L + + Y S RI+I  ++VRGLEYYTG V+E  L  
Sbjct: 306 LLRSWFGDSAKVSEGLDELEQIAQLGQAARYGSKRIRIDPSVVRGLEYYTGPVFEVELLT 365

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            + NEK +PVVFGSVGGGGRYDGLVSRF+G+ VPATGFSIG+SRL  AL  L        
Sbjct: 366 AIPNEKGQPVVFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLQAALTLLGKLD---T 422

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +     D D ++ YQ     LR  GIRAE++LG+ KN GNQLKYADRRN P  I
Sbjct: 423 RPAFGPVVVTVFDRDRVADYQKMVSTLRGHGIRAELYLGNPKNMGNQLKYADRRNAPCVI 482

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           IQG+ E++RG +QIKDL +G + +  I +N+ WRE+R AQ++    ELV+ V+++L  +
Sbjct: 483 IQGSDEKARGEVQIKDLIEGAKAAAAIASNQEWRESRPAQVSAKEDELVAAVREVLARH 541


>gi|40062713|gb|AAR37626.1| histidyl-tRNA synthetase [uncultured marine bacterium 314]
          Length = 475

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 216/489 (44%), Positives = 314/489 (64%), Gaps = 14/489 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+ KL+ EL  GF D    E+ +++R+++ I+  ++ +GF+P+ETP  E S+++GKFL
Sbjct: 1   MSKQKKLKPELASGFRDRKGNELILKDRLIEIIKRNFQLFGFEPLETPGFELSENIGKFL 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           PDEDRP  GVF  +D+   WISLRYDLTAPLARYV+ENFD +  P + Y++G V+RNEK 
Sbjct: 61  PDEDRPMAGVFGFKDEKD-WISLRYDLTAPLARYVSENFDNLSKPFKRYQVGSVWRNEKP 119

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           GPGR+R+F Q D D VG+ + +ADA+MC+++ DTL   G+ +N+Y I ++NRK++ G+LE
Sbjct: 120 GPGRYREFTQIDADIVGTKSVSADADMCVLLVDTLNKCGLDKNEYLIKVSNRKLIQGLLE 179

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++ +  D K   +L  +RA DKLD+ G+ GVK LLG+GR D SGDFTKGA LT  Q + +
Sbjct: 180 ELKVTSDLK---KLTAIRAADKLDRVGISGVKALLGKGRKDKSGDFTKGAGLTENQSEEI 236

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           ++FL ID    +      +   +  ++G +EL  I E + K    ++RIK SS +VRG+E
Sbjct: 237 INFLKIDSFSKLGN----LSSNLTFKEGISELNEILE-LTKLNKFADRIKFSSAVVRGIE 291

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++EA L F V N+K K + FGSVGGGGRYD L+SRF     PATG SIG+ RL+ 
Sbjct: 292 YYTGAIFEANLLFKVKNKKGKEIEFGSVGGGGRYDDLISRFTQSIYPATGVSIGLDRLLY 351

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           A+   +             +     D   +S+Y     +LR++ I +E++ G   +   Q
Sbjct: 352 AITQKKMEKIKDNNP----VVICVFDKKQMSQYNKLLTLLRSSNINSEIYCGDG-SLKAQ 406

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           +KYAD+RN P  I+ G  E   G++ IK+L  GKE S ++K  E W  ++ AQIT  +  
Sbjct: 407 MKYADKRNAPAVILYGDNEIKSGIVTIKNLKLGKEASADLKTREDWTSSKTAQITAKVEN 466

Query: 481 LVSTVKKIL 489
           LV  +KK+L
Sbjct: 467 LVDEIKKLL 475


>gi|92118621|ref|YP_578350.1| histidyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91801515|gb|ABE63890.1| histidyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 526

 Score =  334 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 256/523 (48%), Positives = 340/523 (65%), Gaps = 38/523 (7%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRG  D     I    R+++ IR +YE YGF+P+ETP +EY+D+LGKFLP
Sbjct: 7   KKPQKLRARLPRGLEDRGPAAIAATRRMVEKIREVYERYGFEPVETPAMEYTDALGKFLP 66

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D+DRPN+GVFS QDDD QWISLRYDLTAPLARYVAENF  +  P R+YR G VFRNEK G
Sbjct: 67  DQDRPNEGVFSFQDDDEQWISLRYDLTAPLARYVAENFQNLALPYRSYRAGYVFRNEKPG 126

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VGS++  ADAEMCMM ADT+EA+GI R  Y + +NNRK+ DG+  +
Sbjct: 127 PGRFRQFMQFDADTVGSASPAADAEMCMMAADTMEALGIPRGQYVVKVNNRKVFDGMKVE 186

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +G+  D +    L +LRA+DKLD+ G++GV  LLG GR D +GDFT GANL+  Q + + 
Sbjct: 187 LGITDDAR---WLTILRAMDKLDRLGVEGVDALLGTGRKDETGDFTVGANLSRSQANTIF 243

Query: 242 SFLSIDLEKSMHELYELVKG------------------------------TIAGEKGFNE 271
           S++  +  + + E YE +                                    ++G +E
Sbjct: 244 SYVMSEPVQILREQYERLGQDGFVTFATREVHRRLQDLQALDVLMYEFGRNPISKQGIDE 303

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L  I+E+VR +GYN +RIKI ++++RGLEYYTG VYE  L     +EK +PV FGSVGGG
Sbjct: 304 LRAITEIVRSAGYNEDRIKIDTSVIRGLEYYTGPVYEVELLLETKDEKGRPVRFGSVGGG 363

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           GRYDGLVSRF+G+ VPATGFS+G+SRL  AL  L        + GPV++T    +   ++
Sbjct: 364 GRYDGLVSRFRGEPVPATGFSLGVSRLQAALTMLGKLDTK-PQPGPVVVTVFGGE---IA 419

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
            YQ     LR AGIRAE++LG+ K + G Q+KYAD+R+ P AIIQG+ E++ G +QIKDL
Sbjct: 420 GYQKMVADLRNAGIRAELYLGNPKHSLGQQMKYADKRHSPCAIIQGSDEKASGKVQIKDL 479

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
             G  L+      E  ++   AQI +   +LV+ V+K+L  + 
Sbjct: 480 IAGAGLTSIEDRTEYLKKQAEAQIEVSEGDLVAAVQKLLARHG 522


>gi|163732866|ref|ZP_02140311.1| histidyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161394226|gb|EDQ18550.1| histidyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 533

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 239/536 (44%), Positives = 324/536 (60%), Gaps = 49/536 (9%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A+ P+GF D    E+  R  +L  I  +Y  YGFD +E+  +E  ++LG
Sbjct: 1   MAKPKKTPRPKAQTPKGFRDYFGAEVSQRAEMLQKIAGVYHRYGFDALESSGVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ-----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           KFLPD DRPN+GVF+ Q     D  G W++LRYDLTAPLAR  A++ + +  P R Y +G
Sbjct: 61  KFLPDVDRPNEGVFAWQEDADADKPGDWLALRYDLTAPLARVYAQHQNDLPKPYRRYAMG 120

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           PV+RNEK GPGRFRQF QCD D VG+S+  ADAE+C M+ D LEAVGI+R DY + +NNR
Sbjct: 121 PVWRNEKPGPGRFRQFYQCDADTVGASSVAADAEICAMLCDCLEAVGIERGDYVVRLNNR 180

Query: 173 KILDGILEKIGLHG----DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           K+L+GI+E  GL      +   +ER IVLRAIDK+D+ G  GV  LL +GRTD SGDFT 
Sbjct: 181 KVLNGIMEVAGLLDPTTPEKFAHERGIVLRAIDKIDRLGPSGVSQLLEDGRTDESGDFTA 240

Query: 229 GANLTSEQIDIMVSFLSIDLE-------------------------------KSMHELYE 257
           GA L+ EQ + ++SF++                                   + +  L  
Sbjct: 241 GAGLSREQANKVMSFIAATTNVLNDMQEDHPQEDQWPDFLRLATEHPEEFKTRMLDYLEG 300

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
           +V G+  G +G  EL  I+ L++   Y  +RI+I  ++VRGL YYTG VYEA L F + +
Sbjct: 301 IVAGSKLGVEGVGELRQIANLLQAQDYGPDRIRIDPSVVRGLGYYTGPVYEAELTFEIQD 360

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           EK +   FGSV GGGRYD LV RF GQ VPATG SIG+ RL+ AL +             
Sbjct: 361 EKGRTRNFGSVAGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAALHAKGRL----DTTDV 416

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +     D D ++ YQ     LR AGIRAE++LG+ KNFGNQLKYAD RN P+A+I+G 
Sbjct: 417 GPVVVTVMDRDRMADYQAMVAELRQAGIRAEVYLGNPKNFGNQLKYADTRNSPVAVIEGG 476

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            E  +G++QIKDL  G E+++     E W+  R +Q  +P ++LV+ V++IL ++ 
Sbjct: 477 DEHEKGVVQIKDLILGAEIAKS-ATLEEWK-DRPSQFEVPRADLVAKVREILAQHG 530


>gi|319408683|emb|CBI82338.1| Histidyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 484

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 257/495 (51%), Positives = 349/495 (70%), Gaps = 15/495 (3%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K+ K +A LPRGF D    E+++   +   I  +YE YGF+ +ETP+ EY+D+LGK 
Sbjct: 1   MSIKQKKTKARLPRGFVDRTGVELQVLEAMTAQIHEVYELYGFEALETPIFEYTDALGKS 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN GVFSLQDDD QW+SLRYDLTAPLARYVAENF+ +  P R+YR+G VFRNEK
Sbjct: 61  LPDVDRPNAGVFSLQDDDEQWMSLRYDLTAPLARYVAENFEVLPKPYRSYRLGYVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+    ADAE+CMM AD+L+ +G KR++Y I ++NRKILDG+L
Sbjct: 121 SGPGRFRQFMQLDADIVGAPTVAADAEVCMMAADSLDKLGFKRDEYVIRLSNRKILDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E IGL  +++ ++RLIV RAIDKLD+ GL+GV+LLLG+GR D SGDFTKGA L  +QI+ 
Sbjct: 181 ENIGLGENEQSDKRLIVFRAIDKLDRLGLEGVRLLLGDGRLDESGDFTKGAGLADDQIEC 240

Query: 240 MVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           ++S L   +   E++++ L  +V   + G +G  EL  + E+   +GY  + ++I  ++V
Sbjct: 241 ILSLLRARNETTEETINNLKNIVDRNVCGLEGIRELEEMQEIFVANGY-KDCMRIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYTG V+EA L           + FGS+GGGGRYDGL++RF+  NVPATGFSIG+S
Sbjct: 300 RGLDYYTGPVFEAEL--------CNKLSFGSIGGGGRYDGLIARFRDDNVPATGFSIGLS 351

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RLI  L+++     N K    V++  MD +  S+++YQ     LR AGIR+E++LG S  
Sbjct: 352 RLIAILQNVGKLRVNAKTGP-VVVLMMDQEPGSIARYQNMVMQLRNAGIRSEVYLGESG- 409

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG+ ER RG +QIKDL +G  L+ EIK+N++WRE+R AQIT+
Sbjct: 410 IKAQMKYADRRCAPCVVIQGSQERDRGEVQIKDLVEGARLATEIKDNQTWRESRPAQITV 469

Query: 477 PISELVSTVKKILQE 491
             ++LV  V+ IL +
Sbjct: 470 KENQLVQAVQDILGK 484


>gi|254438108|ref|ZP_05051602.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Octadecabacter antarcticus 307]
 gi|198253554|gb|EDY77868.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Octadecabacter antarcticus 307]
          Length = 523

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 235/529 (44%), Positives = 319/529 (60%), Gaps = 41/529 (7%)

Query: 1   MGKKTKL---RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K+   +A+ P+GF D    E+  R  +L +I  +Y  YGF+ +ET  +E  D+LG
Sbjct: 1   MAKPKKIQRPKAQTPKGFRDYFGAEVAQRTDMLQTIAGVYHRYGFEALETAAVETVDALG 60

Query: 58  KFLPDEDRPNKGVFSLQD--------DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
           KFLPD DRPN+GVF+ Q+          G W++LRYDLTAPLAR  A++ + +  P R +
Sbjct: 61  KFLPDVDRPNEGVFAWQEDDGNDPDLKGGDWLALRYDLTAPLARVYAQHRNDLPTPYRRF 120

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
            +GPV+RNEK GPGRFRQF QCD D VGS +  ADAE+C M+ DTLEAVGI+R DY + I
Sbjct: 121 AMGPVWRNEKPGPGRFRQFYQCDADTVGSGSVAADAEICAMLCDTLEAVGIERGDYVVRI 180

Query: 170 NNRKILDGILEKIGLH---------------------GDDKLNERLIVLRAIDKLDKFGL 208
           NNRK+L+GI++ +                             N    V+R +DK+DK G+
Sbjct: 181 NNRKVLNGIIDSLAEKTLKGFIADPLTQSEEGEIAVVKRVLKNLAEGVMRTLDKVDKVGV 240

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL---SIDLEKSMHELYELVKGTIAG 265
           +GV  LLG+GR D+SG F +G NL    ++ ++ FL   S D  K++  L  +V G+  G
Sbjct: 241 EGVAELLGKGRKDSSGAFIEGQNLPPVIVESLLKFLNAKSSDNAKTLSNLEAIVGGSDEG 300

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
             G  EL  +++L+   GY  +RI I  ++VRGL YYTG V+EA L F + +EK +P  F
Sbjct: 301 AAGVRELQTMADLLAAGGYGPDRIVIDPSVVRGLGYYTGPVFEAELTFEIQDEKGRPRSF 360

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
           GSV GGGRYD LV RF GQ VPATG SIG+ RL+ AL                 +     
Sbjct: 361 GSVAGGGRYDDLVKRFTGQEVPATGTSIGVDRLLAALHMKGRL----TSDTTGPVVVTVM 416

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           D D ++ YQ     LR AGIR+E++LG+ KNFGNQLKYAD+RN P+AIIQG  E + G L
Sbjct: 417 DRDRMADYQAIVSELRQAGIRSEVYLGNPKNFGNQLKYADQRNSPIAIIQGGDELAAGTL 476

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           QIKDL  G +++ E   +E W+  R +Q  IP ++LV  +K +L E  +
Sbjct: 477 QIKDLILGAKIA-ETATHEEWK-DRPSQFEIPRADLVKRIKALLDEQAK 523


>gi|254449689|ref|ZP_05063126.1| histidyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198264095|gb|EDY88365.1| histidyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 523

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 231/529 (43%), Positives = 320/529 (60%), Gaps = 41/529 (7%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M KK K    +A+ P+GF D    E+  R  +L +I  +Y  YGF+ +E+  +E  ++LG
Sbjct: 1   MAKKQKVQRPKAQTPKGFRDYFGAEVAQRTDMLRTIAGVYHRYGFEALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDD----GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
           KFLPD DRPN+GVF+ Q++D    G W++LRYDLTAPLAR  A++ + +  P R + +GP
Sbjct: 61  KFLPDVDRPNEGVFAWQEEDEKGDGDWLALRYDLTAPLARVYAQHRNDLPTPYRRFAMGP 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+RNEK GPGRFRQF QCD D VGS +  ADAE+C M+ DTLEAVGI+R DY + INNRK
Sbjct: 121 VWRNEKPGPGRFRQFYQCDADTVGSGSVAADAEICAMLCDTLEAVGIERGDYVVRINNRK 180

Query: 174 ILDGILEKIGLHG-------------------------DDKLNERLIVLRAIDKLDKFGL 208
           +L+G+LE +                             D +      +LR IDK DK G 
Sbjct: 181 VLNGVLEAVFNWFNVIDLDHDDAETQRIKKEKLASDGSDGQAEISANILRTIDKYDKVGE 240

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL---SIDLEKSMHELYELVKGTIAG 265
           QGV+ LL  GR D+SG F  G  L   Q D++++F+   +   ++++ +L   +  +  G
Sbjct: 241 QGVRELLMGGRKDSSGAFIDGVGLNRRQADLVIAFVTSKNDSNDETLTQLRYAIGESTVG 300

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           E G +EL  +++L+   GY  +RI I  ++VRGL YYTG V+EA L F + +EK +   F
Sbjct: 301 EAGVDELQTMADLLAAGGYGPDRIVIDPSVVRGLGYYTGPVFEAELTFEIHDEKGRARSF 360

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
           GSV GGGRYD LV RF GQ VPATG SIG+ RL+ AL                 +     
Sbjct: 361 GSVAGGGRYDDLVKRFTGQEVPATGISIGVDRLLAALHMKGRL----TSDTTGPVVVTVM 416

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           D D ++ YQ     LR AGIR+E++LG+ KNFGNQLKYAD+RN P+AIIQG  E + G L
Sbjct: 417 DRDRMADYQGIVSELRQAGIRSEVYLGNPKNFGNQLKYADQRNSPIAIIQGGDELAAGTL 476

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           QIKDL  G +++ +   +E W+  R +Q  IP ++LV+ +K +L E  +
Sbjct: 477 QIKDLILGAKIA-QTATHEEWK-DRPSQFEIPRADLVTRIKTLLDEQAK 523


>gi|299134238|ref|ZP_07027431.1| histidyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298590985|gb|EFI51187.1| histidyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 512

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 260/508 (51%), Positives = 340/508 (66%), Gaps = 22/508 (4%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRG  D    EI     +++ IR +YE YGF+P+ETP +EY+D+LGKFLP
Sbjct: 7   KKPQKLRARLPRGLVDRTPSEIAATRAMVEKIRAVYERYGFEPVETPAMEYTDALGKFLP 66

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D+DRPN+GVFS QDDD QWISLRYDLTAPLARYVAENFDT+  P R+YR G V+RNEK G
Sbjct: 67  DQDRPNEGVFSFQDDDEQWISLRYDLTAPLARYVAENFDTLPKPYRSYRHGYVYRNEKPG 126

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VGS++  ADAEMCMM ADT+EA+GI R  Y + +NNRK+LDGI EK
Sbjct: 127 PGRFRQFMQFDADTVGSASPAADAEMCMMAADTMEALGIPRGSYVVKVNNRKVLDGIREK 186

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IG+  D    + L V+RAIDKLDKF  + V LL+  GR D SGDFTKGA L+ E  ++++
Sbjct: 187 IGVTDD---GQWLTVMRAIDKLDKFSEEDVHLLMTVGRKDPSGDFTKGAGLSGEHAEMIL 243

Query: 242 SFLSIDL---EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           S L  +    E++++ +    +     + G  EL  I++L   +GY  +RI+I  ++VRG
Sbjct: 244 SRLRRNGSNNEETLNSIRGSAQENSIYQAGIAELEDIAKLSTSAGYRDDRIRIDPSVVRG 303

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           LEYYTG VYE  L     ++K +PV FGSVGGGGRYDGLVSRF+G+ VPATGFSIG+SRL
Sbjct: 304 LEYYTGPVYEVELLLETRDDKGRPVRFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRL 363

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--------G--IRAE 408
             AL  L       +      +  +  D + +++YQ +   LR +        G  IRAE
Sbjct: 364 QAALTLLGKIDTRPEAGP---VVVLVMDRNEIAQYQKFVTTLRNSPVDPSRPDGPRIRAE 420

Query: 409 MFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           M+LG+ K N G Q KYADRRN P AIIQG  E+++G++QIKDL  G ++  E  + E++ 
Sbjct: 421 MYLGNPKNNLGVQFKYADRRNSPCAIIQGGDEKAKGIVQIKDLILGAQVGGESADREAFL 480

Query: 468 EARV--AQITIPISELVSTVKKILQENK 493
           + +   AQ  +  SELV  V+K+L  + 
Sbjct: 481 QKQQHEAQFAVNESELVEGVRKVLARHN 508


>gi|209886333|ref|YP_002290190.1| histidyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209874529|gb|ACI94325.1| histidyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 540

 Score =  332 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 265/534 (49%), Positives = 349/534 (65%), Gaps = 46/534 (8%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRG  D    EI     ++++IR++YE YGF+P+ETP +EY+D+LGKFLP
Sbjct: 7   KKPQKLRARLPRGLIDRTPSEIAATRAMVETIRSVYERYGFEPVETPAMEYTDALGKFLP 66

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D+DRPN+GVFS QDDD QWISLRYDLTAPLARYVAE+FDT+  P R+YR G V+RNEK G
Sbjct: 67  DQDRPNEGVFSFQDDDEQWISLRYDLTAPLARYVAEHFDTLPKPYRSYRHGYVYRNEKPG 126

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VGS++  ADAEMCMM ADT+EA+GI  + + + INNRK+LDG+L  
Sbjct: 127 PGRFRQFMQFDADTVGSASPAADAEMCMMAADTMEALGIAPHQFVVRINNRKLLDGVLSS 186

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IGL GDD+   +L VLRA+DK DKFGL+GV+LLLGEGR D SGDFTKGA L    I +++
Sbjct: 187 IGL-GDDEAGRKLTVLRAMDKFDKFGLEGVRLLLGEGRKDESGDFTKGAGLDERSIQLVL 245

Query: 242 S--------------------------FLSIDLE------------KSMHELYELVKGT- 262
           S                          F S D              +++  + + +    
Sbjct: 246 SVFQTGVVLTGPASTTEKKARPLDTLTFASQDGAEWHRRVTFESVFETLDHVRQRLGQKV 305

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              E G  EL  I++L+  SGY+  R++I  ++VRGLEYYTG VYE  L     +EK +P
Sbjct: 306 QVFEDGVQELRQIADLLVASGYDDGRVQIDPSVVRGLEYYTGPVYEVELLLETKDEKGRP 365

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
           V FGSVGGGGRYDGLVSRF+G+ VPATGFSIG+SRL  AL  L       +      +  
Sbjct: 366 VRFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLQAALTLLGKIDTKPEAGP---VVV 422

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERS 441
           +  D + +++YQ +   LR AGIRAEM+LG+ K N G Q KYADRRN P AI+QG  E++
Sbjct: 423 LVMDRNEIAQYQKFVATLRNAGIRAEMYLGNPKNNLGVQFKYADRRNSPCAILQGGDEKA 482

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARV--AQITIPISELVSTVKKILQENK 493
           +G++QIKDL  G ++  E ++ E++ + +   AQ  +  SEL+  V+++L  + 
Sbjct: 483 KGVVQIKDLILGAQVGGESEDREAFLQKQQHEAQFAVSESELIEGVRQVLARHG 536


>gi|319899299|ref|YP_004159394.1| Histidyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319403265|emb|CBI76824.1| Histidyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 498

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 272/499 (54%), Positives = 364/499 (72%), Gaps = 7/499 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K+ K +A LPRGF D  + ++     ++  IR +YE YGF+ +ETP+ EY+D+LGKF
Sbjct: 1   MAMKQEKTKARLPRGFIDHTSAQLYGIETMIAQIREVYELYGFEALETPIFEYTDALGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN GVFSLQDDD QW+SLRYDLTAPLARY +ENF+T+  P R+YR G VFRNEK
Sbjct: 61  LPDSDRPNTGVFSLQDDDEQWMSLRYDLTAPLARYFSENFETLPKPYRSYRCGFVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+S   ADAE+CMM AD+LE +GI++ DY I +NNRKILDG+L
Sbjct: 121 PGPGRFRQFMQFDADIVGASTVLADAEICMMAADSLEKLGIQQQDYVIRLNNRKILDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E IGL G ++  +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L  ++I+ 
Sbjct: 181 ELIGLGGKEQEGKRLTVLRAIDKLDKFGPEGVRLLLGQGRLDESGDFTKGAGLKEKEIEN 240

Query: 240 MVSFLSIDL---EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++ ++I     E+++  L ++V+ ++ G +G  EL  +  +  ++GY   R+KI  ++V
Sbjct: 241 VLALMTIGGETAEETIDNLKKMVRSSVQGFEGVCELEEMQAIFAENGYQQ-RVKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F + N+  + VVFGSVGGGGRYDGLV+RF+G+NVPATGFSIG+S
Sbjct: 300 RGLEYYTGSVFEAELLFDIFNDNGQKVVFGSVGGGGRYDGLVARFRGENVPATGFSIGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RLI AL +L       + +GPV++  MD + ++L +YQ     LR AGIR+E++LG+S  
Sbjct: 360 RLISALHNLGKLPIK-ETIGPVVVLVMDKEPEALMRYQKMVMRLRQAGIRSELYLGASG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR+ P  +IQGT ER  G +QIKDL +G  LS EIK+N++WRE+R AQ+ +
Sbjct: 418 IKAQMKYADRRHAPCVVIQGTQERQEGKIQIKDLVEGARLSYEIKDNQTWRESRPAQVIV 477

Query: 477 PISELVSTVKKILQENKEE 495
              +LV TV+ IL   K +
Sbjct: 478 DEDQLVQTVENILITQKSQ 496


>gi|146279952|ref|YP_001170110.1| histidyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145558193|gb|ABP72805.1| histidyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 494

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 233/500 (46%), Positives = 324/500 (64%), Gaps = 16/500 (3%)

Query: 1   MGKKT---KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K     + RAE P+GF D    ++  R  +LD++  +Y  YGFDP+ET  +E  ++LG
Sbjct: 1   MAKDKASRRPRAETPKGFRDYFGADVTERKVMLDAVAEVYHRYGFDPLETSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF  QD+DG W++LRYDLTAPLAR  A+  + +  P R Y +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFGWQDEDGDWLALRYDLTAPLARVAAQFRNDLPSPYRRYAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VG+++  ADAE+C M++D LE VGI R DY + +NNRK+L+G
Sbjct: 121 EKPGPGRFRQFYQCDADTVGAASVAADAEICAMLSDALEVVGIPRGDYIVRVNNRKVLNG 180

Query: 178 ILEKIGL----HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           ++E  G+           ER IVLRAIDK+D+    GV+ LLG GR D+SGDFT+GA L+
Sbjct: 181 VMEVAGVLDPSDPSKFEAERGIVLRAIDKIDRLRETGVRALLGAGRKDDSGDFTRGAGLS 240

Query: 234 SEQIDIMVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            EQ ++++ F++       ++   L ELV G+  G +G  EL  I+EL+   GY  +RI 
Sbjct: 241 DEQAEVVMGFMAAKRATGAETATRLRELVGGSTLGREGVQELETIAELLDAQGYGPDRIV 300

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           +  ++VRGL YYTG V+EA L F +++EK +   FGSV GGGRYD LV RF GQ+VPATG
Sbjct: 301 VDPSVVRGLGYYTGPVFEAELTFEILDEKGRKRQFGSVAGGGRYDDLVKRFTGQSVPATG 360

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+ RL+ AL++   +    +      +     D D +  Y      LR AG+RAE++
Sbjct: 361 VSIGVDRLLAALRAKGRAGQEAQG----PVVVTVMDRDRMGDYMAMVGELRRAGLRAELY 416

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           LG+ KNFGNQLKYAD R  P+A+IQG+ E +R ++ +KDL  G +++    + E W+ +R
Sbjct: 417 LGNPKNFGNQLKYADARKSPVAVIQGSDEAARDVVVLKDLVLGAKIAAG-ASLEEWK-SR 474

Query: 471 VAQITIPISELVSTVKKILQ 490
            AQ+ +P + L   VK +L 
Sbjct: 475 PAQVEVPRAALAQGVKDMLS 494


>gi|304321671|ref|YP_003855314.1| histidyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300573|gb|ADM10172.1| histidyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 493

 Score =  331 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 229/496 (46%), Positives = 316/496 (63%), Gaps = 14/496 (2%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M KK K    +A  P+GF D   +E+    R+L  I  +Y  YGF P+ETP  EY+D+LG
Sbjct: 1   MSKKQKVFRPKARKPKGFRDRAGRELLSETRMLARICEVYAAYGFTPLETPAFEYTDALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVFS++DDD QW+SLRYDLTAPLAR+VAE +D    P R Y++G V+RN
Sbjct: 61  KFLPDTDRPNQGVFSIEDDDKQWMSLRYDLTAPLARHVAEYYDQSPKPFRRYQVGTVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFR+F QCD D VG+S   ADAE  MM+ D + A GI   D+ + +++R+I+ G
Sbjct: 121 EKPGPGRFREFTQCDADTVGASGPHADAEAIMMLTDAVLAAGIDAKDFVVRVSSRQIMSG 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +L  IG+  DD       VLRA+DK D+ G +GV LLLG GR D SGDFT+GA L  +QI
Sbjct: 181 LLRHIGIDPDD-AERAAGVLRAMDKYDRLGAEGVALLLGPGRKDASGDFTEGAQLAGDQI 239

Query: 238 DIMVSFL---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + +++F+    +D + ++  +  L+     G +G  +L  I++ +   GY    ++I  +
Sbjct: 240 EAVLAFMACGQVDTQATLKAMASLIGDDETGREGLADLTSIADTLAALGYAP-HVRIDPS 298

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YYTG V+EA L FPV N+K + V FGSVG GGRYDGLV RFKG  VPA G SIG
Sbjct: 299 VVRGLDYYTGPVFEAELTFPVKNDKGEVVQFGSVGSGGRYDGLVERFKGVRVPAVGCSIG 358

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           +SRL+ AL       +        L+  +  +   +  Y +  + +R  G+RAE++LG S
Sbjct: 359 VSRLLAALTDRGGEEDEAP-----LVVVLALEPTQMIDYHLMAREIRAQGMRAEVYLGGS 413

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                QLKYAD+R     +IQG  ERS G + +KDL  G +LS EI++N  WR  + AQ+
Sbjct: 414 G-MRAQLKYADKRGAAAVVIQGDDERSAGQVTVKDLILGAKLSEEIESNAEWRAGQPAQV 472

Query: 475 TIPISELVSTVKKILQ 490
           T+P ++LV+ V+  L 
Sbjct: 473 TVPRTDLVTAVRGTLA 488


>gi|126733663|ref|ZP_01749410.1| histidyl-tRNA synthetase, putative [Roseobacter sp. CCS2]
 gi|126716529|gb|EBA13393.1| histidyl-tRNA synthetase, putative [Roseobacter sp. CCS2]
          Length = 539

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 249/541 (46%), Positives = 334/541 (61%), Gaps = 57/541 (10%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ + +A+ P+GF D    ++  R  +L++I  +Y  YGFD +ET  +E  ++LGKFLP
Sbjct: 5   KKQPRPKAQTPKGFQDYFGADVTARAEMLNTIAGVYHRYGFDALETSAVETVEALGKFLP 64

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVF+ + +D  W++LRYDLTAPLAR  A+  + + FP R Y +GPV+RNEK G
Sbjct: 65  DVDRPNEGVFAWE-EDNDWLALRYDLTAPLARVAAQYRNDLPFPYRRYAMGPVWRNEKPG 123

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF QCD D VG+S+  ADAE+C M++DTLEAVGI R DY I +NNRK+L+G++E 
Sbjct: 124 PGRFRQFYQCDADTVGASSVAADAEICAMLSDTLEAVGIDRGDYVIRVNNRKVLNGVMEV 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            GL GDDK  ER IVLRAIDKLD+ G++GV+ LLGEGR D SGDFTKGA L  EQ +I++
Sbjct: 184 AGLSGDDKEAERGIVLRAIDKLDRLGVEGVRALLGEGRKDASGDFTKGAALADEQAEIVM 243

Query: 242 SFLSIDLEK--------------------------------------------------S 251
            F+  + EK                                                  +
Sbjct: 244 GFVDWEKEKNRLLAEGVRSSAIARSDAWGSFKNAQHIKEIEEFADPSVRTDANKLINRAA 303

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           ++ L ELV  +  G  G +EL  I  L+   GY ++RI I  ++VRGL YYTG VYEA L
Sbjct: 304 LYHLRELVYSSQVGVDGVDELQEIESLLASQGYRADRILIDPSVVRGLGYYTGPVYEAEL 363

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F + +EK +P  FGSV GGGRYD LV RF GQ VPATG SIG+ RL+ AL++       
Sbjct: 364 TFEIKDEKGRPRNFGSVAGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAALRAKG----Q 419

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           I       +     D D ++ YQ     LR AGIRAE++LG+ KNFGNQLKYAD+R  P+
Sbjct: 420 IDTAAQGPVVVTVMDRDRMADYQTMVADLRNAGIRAEVYLGNPKNFGNQLKYADKRQSPV 479

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           AII G+ E  +G++QIKDL  G E+++     E W+  R +Q  +P  +++  V+ IL E
Sbjct: 480 AIIAGSDEFDKGIVQIKDLILGAEIAKN-ATLEEWK-DRPSQYEVPRDQMIMKVRAILAE 537

Query: 492 N 492
           +
Sbjct: 538 H 538


>gi|39934253|ref|NP_946529.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|46396584|sp|P60919|SYH_RHOPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|39648101|emb|CAE26621.1| putative histidyl-tRNA synthetase [Rhodopseudomonas palustris
           CGA009]
          Length = 523

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 265/516 (51%), Positives = 338/516 (65%), Gaps = 30/516 (5%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRG AD    EI     +++ IR +YE YGF+P+ETP  EY+D+LGKFLP
Sbjct: 6   KKPQKLRARLPRGLADRGPAEIAATRAMVEKIREVYERYGFEPVETPAFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D+DRPN+GVFSLQDDD QWISLRYDLTAPLARYVAENFD +  P R+YR G VFRNEK G
Sbjct: 66  DQDRPNEGVFSLQDDDEQWISLRYDLTAPLARYVAENFDQLPKPHRSYRFGWVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAEMCMM ADT+EA+GI R  Y + +NNRK+LDG+LE 
Sbjct: 126 PGRFRQFMQFDADTVGAPTAAADAEMCMMAADTMEALGIPRGSYVVKVNNRKVLDGVLES 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSEQI 237
           IGL GD+    RL VLRAIDK DKF  + +K LLG GR D      GDFTKGA L+ +Q 
Sbjct: 186 IGLGGDENAGRRLTVLRAIDKSDKFAPEEIKKLLGPGRWDGGEEGKGDFTKGAMLSDDQS 245

Query: 238 DIMVSFLSID--------------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
           ++++   S                      EL          ++G +EL VI++L+   G
Sbjct: 246 ELILRATSPSFIAGRFNADGSGGISNIDTVELLRSTADNETLKQGCDELAVIADLLDACG 305

Query: 284 Y------NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
           Y         R+ I  ++VRGLEYYTG VYE  L     +EK +PV FGSVGGGGRYDGL
Sbjct: 306 YGATSANPDVRVVIDPSVVRGLEYYTGPVYEVELLLDTKDEKGRPVRFGSVGGGGRYDGL 365

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
           VSRF+G+ VPATGFSIG+SRL  AL +L     N  + GPV++T    +   ++ YQ   
Sbjct: 366 VSRFRGEPVPATGFSIGVSRLQAAL-TLIGQLGNKPQAGPVVVTVFGGE---IAGYQKMV 421

Query: 398 QMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
             LR AGIRAE++LG+ K + G Q+KYAD+RN P AIIQG+ E+ +G++QIKDL  G EL
Sbjct: 422 ATLRKAGIRAELYLGNPKHSLGQQMKYADKRNSPCAIIQGSDEKQQGIVQIKDLILGAEL 481

Query: 457 SREIKNNESWREARV-AQITIPISELVSTVKKILQE 491
           +   K+ + + + +  AQ +    E+V+ V+++LQ 
Sbjct: 482 ASLEKDRDEYLKKQAEAQFSCNEDEMVAKVQELLQR 517


>gi|319409224|emb|CBI82868.1| Histidyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 493

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 260/496 (52%), Positives = 356/496 (71%), Gaps = 5/496 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K+ K +A LPRGF D    E++    +   IR +YE YGF+ +ETP+ EY+D+LGK 
Sbjct: 1   MSTKQKKTKARLPRGFVDHTGTELQALEAMTAQIREVYELYGFEALETPIFEYTDALGKS 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN GVFSLQDDD QW+SLRYDLTAPLARYV+ENF+ +  P R+YRIGPVFRN+K
Sbjct: 61  LPDVDRPNAGVFSLQDDDEQWMSLRYDLTAPLARYVSENFEVLPKPYRSYRIGPVFRNDK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+S   ADAE+CMM AD+L  +G + ++Y I ++NRKILDG+L
Sbjct: 121 PGPGRFRQFMQLDADIVGASTVAADAEVCMMAADSLNKLGFECDEYVIRLSNRKILDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E++GL GD++ ++RLIV+RAIDKLD+ GL+GV+LLLGEGR D SGDFTKGA LT +QI  
Sbjct: 181 EEVGLGGDEQADKRLIVMRAIDKLDRLGLEGVELLLGEGRLDESGDFTKGAGLTDDQIKY 240

Query: 240 MVSFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++ FLS+ D E +++ L  ++       +G  EL  + E+   +GY    IKI  ++VRG
Sbjct: 241 ILGFLSMRDDEVTINYLKAMIGHNARAFEGICELKEMQEIFDVNGYQKC-IKIDLSVVRG 299

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++EA L +     + + VVFGS+GGGGRYDGL++RF+ +NVPATGFSIG+SRL
Sbjct: 300 LDYYTGPIFEAGLIYDSYEYEHEKVVFGSIGGGGRYDGLIARFRDENVPATGFSIGLSRL 359

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            +  + +       ++ GPV++  MD +  S+++YQ   + LR AGIR+E++LG S    
Sbjct: 360 RLTWQGIGKFPV-YEKTGPVVVLVMDQEPGSVARYQNMVKQLRNAGIRSEVYLGESG-IK 417

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            Q+KYADRR  P  +IQG+ ER    +QIKDL +G  L+ EIK+N++WRE+R AQIT+  
Sbjct: 418 AQMKYADRRRAPCVVIQGSQERQYREVQIKDLVEGARLANEIKDNQTWRESRPAQITVKE 477

Query: 479 SELVSTVKKILQENKE 494
           ++LV  V+ IL++ K 
Sbjct: 478 NQLVQAVQDILRDQKR 493


>gi|75676717|ref|YP_319138.1| histidyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|74421587|gb|ABA05786.1| histidyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 547

 Score =  329 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 256/516 (49%), Positives = 327/516 (63%), Gaps = 29/516 (5%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRG  D     I    R+++ IR +YE YGF+P+ETP  EY+D+LGKFLP
Sbjct: 31  KKPQKLRARLPRGLEDRGPAAIAATRRMVEKIRAVYERYGFEPVETPAFEYTDALGKFLP 90

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D+DRPN+GVFS QDDD QWISLRYDLTAPLARYVAENF  +  P R+YR G V+RNEK G
Sbjct: 91  DQDRPNEGVFSFQDDDEQWISLRYDLTAPLARYVAENFQNLALPYRSYRAGYVYRNEKPG 150

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VGS++  ADAEMCMM ADT+EA+GI R  Y + +NNRK+LDG+LE 
Sbjct: 151 PGRFRQFMQFDADTVGSASPAADAEMCMMAADTMEALGIPRGQYVVKVNNRKVLDGVLES 210

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL----GEGRTDNSGDFTKGANLTSEQI 237
           IGL G++    RL VLRAIDK DKF    ++ LL     +G  +  GDFTKGA L   Q 
Sbjct: 211 IGLGGEENAGRRLTVLRAIDKTDKFPEYEIRKLLGTGRWDGGEEGKGDFTKGAGLDERQS 270

Query: 238 DIMVSFLSI-----------DLEKSMHELYELVKGTIAGE---KGFNELVVISELVRKSG 283
           ++++   S                +  +  EL++     E   +G +EL  I+EL+   G
Sbjct: 271 EVILRATSPANVAGRFNADGSGGVNNRDTVELLRSIAPAEILRQGCDELWEIAELLEAGG 330

Query: 284 Y------NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
           Y         R+ I  ++VRGLEYYTG V+E  L     +EK +PV FGSVGGGGRYD L
Sbjct: 331 YGATSRNPDVRVIIDPSVVRGLEYYTGPVFEVELLLKTKDEKGRPVRFGSVGGGGRYDDL 390

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
           VSRF+G+ VPATGFSIG+SRL  AL  L        + GPV++T    D   ++ YQ   
Sbjct: 391 VSRFRGEPVPATGFSIGVSRLQAALTMLGKLDTK-PQPGPVVVTVFGGD---IAGYQKMV 446

Query: 398 QMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
             LR AGIRAE++LG+ K + G Q+KYAD+RN P AIIQGT E++ G + IKDL  G  L
Sbjct: 447 ADLRNAGIRAELYLGNPKHSLGQQMKYADKRNSPCAIIQGTDEKANGKVLIKDLIAGAGL 506

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           +      E  ++   AQ+    S LV+ V+K+L  +
Sbjct: 507 TSIEDRAEYLKKQAEAQVEAAESNLVAEVRKLLARH 542


>gi|316932722|ref|YP_004107704.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315600436|gb|ADU42971.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 509

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 265/506 (52%), Positives = 339/506 (66%), Gaps = 24/506 (4%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K +KLRA LPRG AD    EI     +++ IR +YE YGF+P+ETP  EY+D+LGKFLP
Sbjct: 6   KKPSKLRARLPRGLADRGPAEIAATRAMVEKIREVYERYGFEPVETPAFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D+DRPN+GVFSLQDDD QWISLRYDLTAPLARYVAENFD +  P R+YR G VFRNEK G
Sbjct: 66  DQDRPNEGVFSLQDDDEQWISLRYDLTAPLARYVAENFDALPKPYRSYRFGWVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAEMCMM ADT+EA+GI R  Y + +NNRK+LDGI E 
Sbjct: 126 PGRFRQFMQFDADTVGAPTAAADAEMCMMAADTMEALGIPRGSYVVKVNNRKVLDGIREA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSEQI 237
            G+  D +    L V+RAIDK DKF ++ +  LLG GR D      GDFTKGA L   Q 
Sbjct: 186 QGIDSDAQ---WLTVMRAIDKADKFPIKDIIQLLGPGRWDGGEEGKGDFTKGAGLNQTQT 242

Query: 238 DIMVSFLSI----------DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
           D ++SF+            D + ++  +   V+G+  G  G  EL  I+EL    GY  +
Sbjct: 243 DAIISFIGDKDSVASMQGADNQSTLANMRARVEGSKTGSDGVAELATIAELADAGGYG-D 301

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
            +KI  ++VRGLEYYTG VYE  L     +EK +PV FGSVGGGGRYDGLVSRF+G+ VP
Sbjct: 302 CVKIDPSVVRGLEYYTGPVYEVELLLDTKDEKGRPVRFGSVGGGGRYDGLVSRFRGEPVP 361

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           ATGFSIG+SRL  AL +L    +N  + GPV++T    D   ++ YQ     LR AGIRA
Sbjct: 362 ATGFSIGVSRLQAAL-TLIGQLDNRPQAGPVVVTVFGGD---IAGYQKMVASLRQAGIRA 417

Query: 408 EMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           E++LG+ K + G Q+KYAD+RN P AIIQG+ E ++G++QIKDL  G EL+   K+ + +
Sbjct: 418 ELYLGNPKHSLGQQMKYADKRNSPCAIIQGSDENAQGIVQIKDLILGAELASLEKDRDEY 477

Query: 467 REARV-AQITIPISELVSTVKKILQE 491
            + +  AQ +    ELV+ V+++LQ 
Sbjct: 478 LKKQAEAQFSCKEDELVAKVQELLQR 503


>gi|319404664|emb|CBI78266.1| Histidyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
 gi|319404683|emb|CBI78285.1| Histidyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 495

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 268/497 (53%), Positives = 360/497 (72%), Gaps = 7/497 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K+ + +A LPRGF D  + ++     ++  IR +YE YGF+ +ETP+ EY+D LGKF
Sbjct: 1   MAMKQERTKARLPRGFIDRTSAQLYSIETMVAQIREVYELYGFEALETPIFEYTDVLGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN GVFSLQDDD QW+SLRYDLTAPLARY +ENF+T+  P R+YR GPVFRNEK
Sbjct: 61  LPDSDRPNAGVFSLQDDDEQWMSLRYDLTAPLARYFSENFETLPKPYRSYRYGPVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+    ADAE+CMM AD+LE +GI++ DY I +NNRKILDG+L
Sbjct: 121 PGPGRFRQFMQFDADIVGAPTVLADAEICMMAADSLERLGIQQEDYVIRLNNRKILDGVL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             IGL G ++  +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L  ++I+ 
Sbjct: 181 GLIGLGGKEQEEKRLTVLRAIDKLDKFGSEGVRLLLGQGRLDESGDFTKGAGLKDKEIEC 240

Query: 240 MVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++ +++     E+++  L ++V+ +    +G  EL  +  +  ++GY  NRIKI  ++V
Sbjct: 241 VLALMAVSAETAEETIDNLKKMVEHSDQALEGLCELEEMQAIFAENGY-QNRIKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F + N+  + VVFGSVGGGGRYDGLV+RF+G+N+PATGFS+G+S
Sbjct: 300 RGLEYYTGPVFEAALLFDIFNDDGQKVVFGSVGGGGRYDGLVARFRGENIPATGFSVGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RLI AL++L       + +GPV++  MD + ++L +YQ     LR AGIR+E++LG+S  
Sbjct: 360 RLISALQNLGKLPVK-ETIGPVVVLMMDKEPEALVRYQKMVMRLRQAGIRSELYLGASG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG  ER  G +QIKDL +G  LS EIK+N++WRE+R AQIT+
Sbjct: 418 IKAQMKYADRRRAPCVVIQGAQERQEGKIQIKDLVEGARLSHEIKDNQTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENK 493
              +LV TV+ IL   +
Sbjct: 478 DEDQLVQTVQNILVSQR 494


>gi|222106787|ref|YP_002547578.1| histidyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221737966|gb|ACM38862.1| histidyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 550

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 293/539 (54%), Positives = 359/539 (66%), Gaps = 56/539 (10%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRGF D    +IR  N +   IR +YE YGFDP+ETPL EY+D+LGKFLP
Sbjct: 6   KKPQKLRARLPRGFVDREAHDIRAVNEMTAKIREVYERYGFDPVETPLFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D+VG+    ADAEMCMMMADTLEA+GI+R DY I +NNRK+LDG+L+ 
Sbjct: 126 PGRFRQFMQFDADSVGAPGVQADAEMCMMMADTLEALGIQRGDYVIRVNNRKLLDGVLDA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             +       +RL  LR++DK DKFG  GVKLLL  GR D SGDFTKG  LT +Q D ++
Sbjct: 186 AEVPD----FKRLETLRSLDKFDKFGTGGVKLLLTNGRKDESGDFTKGVGLTEQQADSLL 241

Query: 242 S--------------------FLSIDLEKSMHELYELVKGTIA----------------- 264
           S                    F   + +  +    ++++                     
Sbjct: 242 SIFAPGNSYRCSYLKEDGTVGFFEGNPDVIIQNWDDVLRSHNEIGLAKFFGAPSENPSLM 301

Query: 265 --------------GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                         G +G  EL+ +  + + +GY+  RI+I  ++VRGLEYYTG VYEA 
Sbjct: 302 ALLNANIACKGQQKGMEGVVELLSMLRIFQDAGYDETRIRIDPSVVRGLEYYTGPVYEAE 361

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ ALK+L     
Sbjct: 362 LTFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMTALKNLRKLGA 421

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
           + + + PVLIT MD D +S+ +YQ +TQ LR  GIRAEM+ G+ K FGNQLKYADRR  P
Sbjct: 422 D-EVIAPVLITVMDGDVESMGRYQRFTQALRNEGIRAEMYQGNWKKFGNQLKYADRRGSP 480

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
           +AIIQG  ER +G++QIKDL +GK LS EI +N  WREARVAQI +P +ELV+ VK+IL
Sbjct: 481 IAIIQGGDEREQGVVQIKDLIEGKRLSGEITDNTEWREARVAQIVVPEAELVAKVKEIL 539


>gi|86748310|ref|YP_484806.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86571338|gb|ABD05895.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 526

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 259/519 (49%), Positives = 327/519 (63%), Gaps = 31/519 (5%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KLRA LPRG  D    EI     ++++IR +YE YGF+P+ETP  EY+D+LGKFLP
Sbjct: 6   KKPQKLRARLPRGLTDRGPAEIAATRAMVETIREVYERYGFEPVETPAFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D+DRPN+GVFSLQDDD QWISLRYDLTAPLARYVAENFD +  P R+YR G VFRNEK G
Sbjct: 66  DQDRPNEGVFSLQDDDEQWISLRYDLTAPLARYVAENFDALPKPYRSYRFGWVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VGS +  ADAEMCMM ADT+EA+GI R  Y + +NNRK+LDG+LE 
Sbjct: 126 PGRFRQFMQFDADTVGSGSPAADAEMCMMAADTMEALGIPRGSYVVKVNNRKVLDGVLEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSEQI 237
           IGL GD+    RL VLRAIDK DKF  + +K LLG GR D      GDFTKGA L  +QI
Sbjct: 186 IGLGGDENAGRRLTVLRAIDKSDKFPPEEIKKLLGPGRWDGGEEGKGDFTKGAMLGDDQI 245

Query: 238 DIMVSFLSID--------------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
           ++++   S                      EL          ++G +EL VIS+L+   G
Sbjct: 246 ELILRATSPSFIAGRFNADGSGGVSNADTVELLRSTADNETLKQGCDELSVISDLLDSGG 305

Query: 284 Y------NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
           Y       + R+ I  ++VRGLEYYTG VYE  L     +EK +PV FGSVGGGGRYDGL
Sbjct: 306 YGATSTNPNVRVVIDPSVVRGLEYYTGPVYEVELLLETKDEKGRPVRFGSVGGGGRYDGL 365

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
           VSRF+G+ VPATGFSIG+SRL  AL  +              +     D + L+ YQ   
Sbjct: 366 VSRFRGEPVPATGFSIGVSRLQAALTMIGKLGTRPATGP---VVVTVFDRERLADYQKMV 422

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR---GMLQIKDLAKGK 454
             LR   IRAE++LG+ KN GNQLKYAD+RN P  IIQG+ E++      + +KDL  G 
Sbjct: 423 SQLRAEDIRAELYLGNPKNMGNQLKYADKRNSPCVIIQGSDEKNDPDGPQVIVKDLILGA 482

Query: 455 ELSREIKNNESWREARV-AQITIPISELVSTVKKILQEN 492
           EL+   K+ + + + +  AQ  +P   ++  V++IL  +
Sbjct: 483 ELAALDKDRDDYLQRQADAQRKVPQLGMIDEVRRILARH 521


>gi|197103798|ref|YP_002129175.1| histidyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|196477218|gb|ACG76746.1| histidyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 505

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 221/496 (44%), Positives = 312/496 (62%), Gaps = 9/496 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M     +  A  PRGF D   +++    +IL ++  +YE +GF+P+ET   EY+D+LGKF
Sbjct: 13  MAQDPQRPEARTPRGFVDRRARDVVAERQILTAVSGVYERWGFEPLETGAFEYADALGKF 72

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN+GVF+LQDDD QW++LRYDLTAPLAR+ A+N++T+  P R Y  GPV+RNEK
Sbjct: 73  LPDADRPNEGVFALQDDDEQWMALRYDLTAPLARFAAQNWETLPKPFRRYAYGPVWRNEK 132

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFR+F+QCD D VGS+   ADAE+  M    LEA G+      I INNRK+L+G++
Sbjct: 133 PGPGRFREFVQCDADTVGSARPEADAEIIAMAVQGLEAAGLPAGSAVIKINNRKLLNGLM 192

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+  + +   +L VLRA+DKLD+ G  GV+LLLGEGR D SG FTKGA L+++  + 
Sbjct: 193 AAAGVTDEAQ---KLGVLRAVDKLDRLGADGVRLLLGEGRLDESGAFTKGAGLSAQSAER 249

Query: 240 MVSFLSIDLE---KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++F +  +    +++ +L E+V G+  G++G  EL  I   +   G   +R      +V
Sbjct: 250 VLAFTAAGVGGRAETLAKLAEVVGGSAEGDEGLAELAAIDAALSALGVGPDRALFDPAVV 309

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L     +EK + V FGS+GGGGRYD LV+RF G+  PATGFS G+S
Sbjct: 310 RGLEYYTGAVFEAELLLSTTDEKGQKVTFGSIGGGGRYDDLVARFTGERTPATGFSFGVS 369

Query: 357 RLIVALKSLESSTNNIKEMGPV-LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           RL  AL++                +  +  D   ++ Y      +R AG+ AE++LGSS 
Sbjct: 370 RLAAALRAAGRDAARKGPWAVRGPVVVIAFDQARMADYFALAGEIRAAGVPAEVYLGSSG 429

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               Q+KYADRR  P A+I G  E + G + +KDL  G+EL+ ++ +N  WRE R  Q T
Sbjct: 430 -MKAQMKYADRRLSPAAVILGEDEIAAGTVTVKDLDLGRELASKVTDNAEWREQRPGQQT 488

Query: 476 IPISELVSTVKKILQE 491
           I  +EL+  +++IL  
Sbjct: 489 IARAELIPALRRILDA 504


>gi|114569150|ref|YP_755830.1| histidyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|114339612|gb|ABI64892.1| histidyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 492

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 227/495 (45%), Positives = 309/495 (62%), Gaps = 10/495 (2%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  + +A  PRGF D     +R+   ++++   +Y+++GF+P++T   EY+D+LGKFLP
Sbjct: 4   KKPFRPKARRPRGFEDRSGSVLRVERHLVETASRVYDDWGFEPLQTSAFEYADALGKFLP 63

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           DE+RPN+GVF+L+DDDGQW+SLRYD TAPLARYVAENF  +  P R Y+ G V+RNEK G
Sbjct: 64  DEERPNEGVFALEDDDGQWLSLRYDHTAPLARYVAENFQDLNKPYRRYQAGDVWRNEKPG 123

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+QCD D VG+ + +ADAEM  + AD + AVG+   DY + +N+R+ILDG+LE 
Sbjct: 124 PGRFRQFVQCDADTVGAGSPSADAEMIALAADVMRAVGLADGDYVVRVNDRRILDGVLES 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           IG    ++      VLRA DKLD+ G  GV  LLGEGR D SGD+T+GA L +  ID ++
Sbjct: 184 IGAADPERRMR---VLRAADKLDRLGRDGVAQLLGEGRKDESGDYTEGAKLDAAGIDTVL 240

Query: 242 SFLSIDL---EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            FL          +  L  L+  +  G+ G   L  I  ++   G + +R     ++VRG
Sbjct: 241 GFLDAGGGSRSDVIARLEPLIGTSDTGKAGLAALAEIDAVLTAIGVDVDRALFDPSVVRG 300

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L YYTG V+EA L      +   P+ FGSVGGGGRYD LVSRF GQ VPATGFS G+SR 
Sbjct: 301 LGYYTGPVFEAELLAQASYDDGSPIQFGSVGGGGRYDDLVSRFTGQAVPATGFSFGVSRF 360

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
             AL +L  +    ++    L+  +  + D  + Y    + LR AG RAE F+GS  N G
Sbjct: 361 AAALSALGLTGAVEEKP---LVLVVASEKDRSADYLAMARELRAAGFRAEAFVGSG-NMG 416

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            Q+KYADRR    A+I G+ ER  G++ IKDL  G  L+ +I +N+ WRE + AQ T+  
Sbjct: 417 KQIKYADRRGAVAAVIVGSNEREEGLVTIKDLKLGARLAADISDNKQWREEQPAQETVSR 476

Query: 479 SELVSTVKKILQENK 493
              V+ V  + Q NK
Sbjct: 477 DGWVAAVSAVAQRNK 491


>gi|319407645|emb|CBI81294.1| Histidyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 495

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 268/497 (53%), Positives = 359/497 (72%), Gaps = 7/497 (1%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K+ + +A LPRGF D  + ++     ++  IR +YE YGF+ +ETP+ EY+D LGKF
Sbjct: 1   MAMKQERTKARLPRGFIDRTSAQLYSIETMVAQIREVYELYGFEALETPIFEYTDVLGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN GVFSLQDDD QW+SLRYDLTAPLARY +ENF+T+  P R+YR GPVFRNEK
Sbjct: 61  LPDSDRPNAGVFSLQDDDEQWMSLRYDLTAPLARYFSENFETLPKPYRSYRYGPVFRNEK 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFRQF+Q D D VG+    ADAE+CMM AD+LE +GI++ DY I +NNRKILDGIL
Sbjct: 121 PGPGRFRQFMQFDADIVGAPTVLADAEICMMAADSLERLGIQQEDYVIRLNNRKILDGIL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             IGL G ++  +RL VLRAIDKLDKFG +GV+LLLG+GR D SGDFTKGA L  ++I+ 
Sbjct: 181 GLIGLGGKEQEEKRLTVLRAIDKLDKFGSEGVRLLLGKGRLDESGDFTKGAGLKDKEIEC 240

Query: 240 MVSFLSID---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++ +++     E+++  L ++V+ +    +G  EL  +  +  K+GY  NRIKI  ++V
Sbjct: 241 VLALMAVSAETAEETIDNLKKMVEHSSQALEGLCELEEMQAIFSKNGY-QNRIKIDPSVV 299

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L F + N+  + VVFGSVGGGGRYDGLV+RF+G+N+PATGFS+G+S
Sbjct: 300 RGLEYYTGPVFEAALLFDIFNDDGQKVVFGSVGGGGRYDGLVARFRGENIPATGFSVGVS 359

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RLI AL++L       + +GPV++  MD + ++L +YQ     LR AGIR+E++LG+S  
Sbjct: 360 RLISALQNLGKLPVK-EMIGPVVVLMMDKEPEALVRYQKMVMRLRQAGIRSELYLGTSG- 417

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  +IQG  ER  G +QIKDL +G  LS EIK+N++WRE+R AQIT+
Sbjct: 418 IKAQMKYADRRRAPCVVIQGAQERQEGKIQIKDLVEGARLSHEIKDNQTWRESRPAQITV 477

Query: 477 PISELVSTVKKILQENK 493
             ++ V  V+ IL   +
Sbjct: 478 DEAQFVQAVQNILISQR 494


>gi|330813611|ref|YP_004357850.1| histidyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486706|gb|AEA81111.1| histidyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 478

 Score =  324 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 210/489 (42%), Positives = 309/489 (63%), Gaps = 14/489 (2%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M KK  K   ELP GF D   +E+ IR+ ++ +I+ I   YGF  +ETP  EY+DS+GKF
Sbjct: 1   MNKKFFKPTCELPNGFTDRQEEELLIRDLLISNIKKIMSKYGFQYLETPSFEYTDSIGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRP++GVFS +D+  +W+SLRYDLTAPLARY A+NFD++  P + +++G V+RNEK
Sbjct: 61  LPDKDRPSEGVFSFEDEK-KWLSLRYDLTAPLARYAAKNFDSLPRPFKRFQLGTVWRNEK 119

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFR+F+Q D D +G+S   +DAE+C ++++ L++ G+  ++++I I+NRK+  G+L
Sbjct: 120 PGPGRFREFLQFDADYIGTSNLFSDAELCFLISEILKSCGLGTSEFNIKISNRKLSKGLL 179

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           EK+ +  + K   + I LRAIDKLD+ G +GV+ LLG+GR D SGDFTKGA L   QI  
Sbjct: 180 EKLNITDEQK---QSITLRAIDKLDRVGAEGVQYLLGKGRKDKSGDFTKGAELEEAQIKE 236

Query: 240 MVSFLSID--LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
           +++FL+I    EK+   + E+     +   G  EL ++ +      +         T+VR
Sbjct: 237 IINFLNIKNLSEKNFERIREIAADNESMNDGIKELELMEKYFSLFNFT--NYIFDPTVVR 294

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GLEYYTG ++EA L F V N K + + FGSVGGGGRYD LV RF  Q+ P+TG S+G+ R
Sbjct: 295 GLEYYTGPIFEANLTFGVKNNKGQEIEFGSVGGGGRYDDLVKRFNNQDCPSTGISVGLDR 354

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           LI A+    +     K      +     D   +  Y     MLR+  I AE++ GSS N 
Sbjct: 355 LIYAILQKNTIKAEKKSP----VLICVFDEKYMDFYIKILNMLRSENISAEIYSGSS-NI 409

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q KYAD+R C   I+ G  E S+ ++ IK+L  GK++S  IK+   W+++  AQ T+ 
Sbjct: 410 KSQFKYADKRGCDFVILCGDDEVSKNVVTIKNLNIGKQMSENIKDRSEWKQSTDAQKTVA 469

Query: 478 ISELVSTVK 486
             +L++ +K
Sbjct: 470 FDQLLNEIK 478


>gi|329891322|ref|ZP_08269665.1| histidyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328846623|gb|EGF96187.1| histidyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 490

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 216/491 (43%), Positives = 297/491 (60%), Gaps = 12/491 (2%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            +  A  PRGFAD   +++    RI+  +  +YE +GF+ +ETP  EY+D+LGKFLPD D
Sbjct: 7   NRPEARAPRGFADRRGRDLTAERRIVARVSEVYERWGFEALETPAFEYADALGKFLPDAD 66

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           RPN+GVF+LQDDD QW++LRYD TAPLAR+ A+N++T+  P R Y  GPV+RNEK GPGR
Sbjct: 67  RPNEGVFALQDDDDQWMALRYDHTAPLARFAAQNWETLPKPFRRYAYGPVWRNEKPGPGR 126

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           FR+F QCD D VGS    ADAE+  M  + L A G+      I ++NRK+ DG+ +  G+
Sbjct: 127 FREFWQCDADTVGSDRPEADAEIIAMGCEGLRAAGLAAGQAVIRVSNRKLFDGLFDAGGI 186

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                  +RL  LRA+DK D+ G++GV+LLLGEGR D SGD+TKGANL +  I  + +FL
Sbjct: 187 TD---PVQRLTALRAVDKYDRLGVEGVRLLLGEGRLDESGDYTKGANLPASVIGAIEAFL 243

Query: 245 SID-----LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +           + +         AGE+   EL  I   +   G + + ++   TIVRGL
Sbjct: 244 ASAETPGLSRAGVLDAVSGAALGAAGEEALKELAAIDRALNAMGVSQDDVRFDPTIVRGL 303

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           EYYTG V+EA L     +EK + V FGS+GGGGRYD LVSRF GQ+ PATGFS G+SRL 
Sbjct: 304 EYYTGAVFEAELLLDTKDEKGRTVRFGSIGGGGRYDDLVSRFTGQSTPATGFSFGVSRLA 363

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            AL++      +        +  +    D +  Y      LR AGI AE++LG +     
Sbjct: 364 SALRAAGRGAEDETRGP---VVAIVFSEDDMQHYLDAVSELRAAGIPAELYLGRAG-MKA 419

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           Q+KYADRR  P A+I G  E + G + IKDL  G+  +  I +N +W+  R  Q T+   
Sbjct: 420 QMKYADRRGAPAAVILGGDEIAAGHVTIKDLDAGRARAAAITDNNAWKAERPGQQTVARD 479

Query: 480 ELVSTVKKILQ 490
           +LV+ V+ I++
Sbjct: 480 QLVAVVRSIVE 490


>gi|126463989|ref|YP_001045102.1| histidyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|126105800|gb|ABN78330.1| histidyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 543

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 233/549 (42%), Positives = 324/549 (59%), Gaps = 65/549 (11%)

Query: 1   MGKKT---KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K     + RAE P+GF D    ++  R  +LD++  +Y  YGFDP+ET  +E  ++LG
Sbjct: 1   MAKDKASRRPRAETPKGFRDYFGADVTERKAMLDAVAEVYHRYGFDPLETSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVF  QD+DG W++LRYDLTAPLAR  A+  + +  P R Y +GPV+RN
Sbjct: 61  KFLPDVDRPNEGVFGWQDEDGDWLALRYDLTAPLARVAAQFRNDLPSPYRRYAMGPVWRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF QCD D VGS++  ADAE+C M++D LE VGI R DY + +NNRK+L+G
Sbjct: 121 EKPGPGRFRQFYQCDADTVGSASVAADAEICAMLSDALEVVGIPRGDYIVRVNNRKVLNG 180

Query: 178 ILEKIGL----HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           ++E  G+           ER IVLRAIDK+D+ G  GV+ LLG GR D SGDFTKGA L+
Sbjct: 181 VMEVAGVLDPSDPAKFEAERGIVLRAIDKIDRLGETGVRALLGSGRKDESGDFTKGAGLS 240

Query: 234 SEQIDIMVSFLSI---------DLEKSMHELYELVKGTIA-------------------- 264
            +Q  I++SF++          D  + +    E ++                        
Sbjct: 241 DDQAAIIMSFVNAPRAINERMNDFSEFLSVDSETLEAHPEARTAVSIARAWTSQSPSEQP 300

Query: 265 -----------------------GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                                  G+ G +EL  I++ +   GY  +RI +  ++VRGL Y
Sbjct: 301 SKNRLTSLAAIGILGDLVKGSSQGQDGVSELAQIADYLEAQGYGPDRIVVDPSVVRGLGY 360

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG V+EA L F + +EK +   FGSV GGGRYD LV RF GQ+VPATG SIG+ RL+ A
Sbjct: 361 YTGPVFEAELTFEIFDEKGRKRQFGSVAGGGRYDDLVKRFTGQSVPATGVSIGVDRLLAA 420

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L++   +    +      +     D D +  Y      LR AG+RAE++LG+ KNFGNQL
Sbjct: 421 LRAKGRAGAEAQG----PVVVTVMDRDRMGDYMAMVGELRRAGLRAELYLGNPKNFGNQL 476

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           KYAD R  P+A+IQG+ E +RG++ +KDL  G +++    + E W+ +R AQ+ +P ++L
Sbjct: 477 KYADARKSPVAVIQGSDEATRGVVVLKDLVLGAQIAAG-ASLEEWK-SRPAQVEVPRADL 534

Query: 482 VSTVKKILQ 490
           V  V+ +L 
Sbjct: 535 VRAVQDMLS 543


>gi|90419958|ref|ZP_01227867.1| histidyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90335999|gb|EAS49747.1| histidyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 550

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 261/537 (48%), Positives = 335/537 (62%), Gaps = 48/537 (8%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K ++++A +PRGF D    ++R ++ +L  IR +YE YGF+P+ETP+ EY+D+LGKFLP
Sbjct: 6   KKPSRVQARVPRGFVDRDASDLRAQDAMLTKIRRVYETYGFEPVETPVFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN GVFSLQDDD  W+SLRYDLTAPLARYVAEN++++  P R+YR G VFRNEK G
Sbjct: 66  DADRPNAGVFSLQDDDEAWMSLRYDLTAPLARYVAENYESLPKPYRSYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+   +ADAEM MMMADT+EA+GI R  Y I +NNRK+LDG+LE 
Sbjct: 126 PGRFRQFMQFDADIVGAPNVSADAEMAMMMADTMEALGIPRGQYVIRVNNRKVLDGVLEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL----GEGRTDNSGDFTKGANLTSEQI 237
           IGL G++    RL VLRAIDKLDKFG +GVKLLL     +G  +  GDFT GA L   Q 
Sbjct: 186 IGLGGEENAGRRLTVLRAIDKLDKFGPEGVKLLLGTGRWDGGQEGEGDFTPGAGLDDAQT 245

Query: 238 DIMV--------SFLSIDLEKSMHELYELVKGTIAG---------------------EKG 268
             ++         +      K +   ++ +K   +G                      +G
Sbjct: 246 KRLLWFVTVASRDYDDPTKSKEIDPKFDYLKEDGSGGAEKLLTTAILDSDYGTNAGVIEG 305

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
             EL+ I +L   SGY   RI +  + VRGLEYYTG V+EA L F V NEK + V FGSV
Sbjct: 306 ITELIAIRDLAIASGYGDGRIILDPSCVRGLEYYTGPVFEAELLFDVTNEKGQKVQFGSV 365

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
           GGGGRYDGLVSRF  Q VPATGFS+G+SRL+ ALK+L       +      +     D  
Sbjct: 366 GGGGRYDGLVSRFMSQPVPATGFSVGVSRLMTALKNLGRLDAAERTGP---VVVTVMDRG 422

Query: 389 SLSKYQMYTQMLRTA------G------IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            ++ YQ     LR A      G      +  E+F G+ K FG QL+YADRRN P+ +IQG
Sbjct: 423 RMADYQAMATTLRAALNTDENGNPTATPVPVEVFQGNPKQFGKQLQYADRRNAPVVVIQG 482

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
             E++ G +Q+KDLA GKELS EI +N  WREAR  Q  +  +++V+ VK IL    
Sbjct: 483 GDEKAAGKVQVKDLALGKELSAEITDNAEWREARAGQEMVDEADMVAAVKAILARQN 539


>gi|83943741|ref|ZP_00956199.1| histidyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83845421|gb|EAP83300.1| histidyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 545

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 245/551 (44%), Positives = 322/551 (58%), Gaps = 64/551 (11%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +AE P+GF D    E+  R  +L  I  +Y  YGFD +E+  +E   +LG
Sbjct: 1   MAKPKKTPRPKAETPKGFRDYFGAEVTQRAEMLHKIAQVYHRYGFDALESSGVETVQALG 60

Query: 58  KFLPDEDRPNKGVFSLQ-----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           KFLPD DRPN+GVF+ Q     D  G W++LRYDLTAPLAR  A++ + +  P R Y +G
Sbjct: 61  KFLPDVDRPNEGVFAWQEDAEADKPGDWLALRYDLTAPLARVYAQHRNDLPTPYRRYAMG 120

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           PV+RNEK GPGRFRQF QCD D VG+ +  ADAE+C M+AD LE VGI R DY + +NNR
Sbjct: 121 PVWRNEKPGPGRFRQFYQCDADTVGAPSVAADAEICAMLADCLEEVGIDRGDYIVRVNNR 180

Query: 173 KILDGILEKI----GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           K+L+G++E        + D+  +ER IVLRAIDKLD+ GL GV  LLG+GR D SGDFT+
Sbjct: 181 KVLNGVMEVAGVLDPANPDNFAHERGIVLRAIDKLDRLGLDGVLDLLGKGRKDASGDFTE 240

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELY-------------------------------- 256
           GANL+  Q   ++ FLS        E                                  
Sbjct: 241 GANLSVSQRQRILKFLSAGSGAHRDEFAFGSGGVDEDPEEFENRVRGIHLFSDGNYDDAI 300

Query: 257 --------------ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                          L +G+  G +G  EL +IS L+   GYN++RI I  ++VRGL YY
Sbjct: 301 SGGSYNERVLATLDALTEGSKTGAEGVEELRMISSLLAAQGYNADRIVIDPSVVRGLGYY 360

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG V+EA L F + +EK +P  FGSV GGGRYD LV RF GQ VPATG SIG+ RL+ AL
Sbjct: 361 TGPVFEAELTFEIRDEKGRPRNFGSVAGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAAL 420

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++    +   +      +     D   +S YQ     LR AGIRAE++LG+ KNFGNQLK
Sbjct: 421 QAKGRMSAQAEG----PVVVTVMDKARMSDYQAMVAELRQAGIRAEVYLGNPKNFGNQLK 476

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           YADRR  P+A+I G  E  +GM+QIKDL  G +++ E    E W+  R +Q  +   +LV
Sbjct: 477 YADRRASPVAVIAGGDEFDKGMIQIKDLILGAKIA-ESATLEEWK-DRPSQYEVARGDLV 534

Query: 483 STVKKILQENK 493
           S V++IL+ N+
Sbjct: 535 SKVREILELNR 545


>gi|163758396|ref|ZP_02165484.1| putative histidyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162284685|gb|EDQ34968.1| putative histidyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 517

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 269/504 (53%), Positives = 332/504 (65%), Gaps = 23/504 (4%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
           A L RGF D    +IR  ++++  IR +YE +GF+P+ETP +EY+D+LGKFLPD+DRPN+
Sbjct: 16  ARLARGFPDRSPGDIRATDQMMAKIRTVYERFGFEPVETPFVEYTDALGKFLPDQDRPNE 75

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           GVFS QDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK GPGRFRQF
Sbjct: 76  GVFSFQDDDEQWLSLRYDLTAPLARHVAENFNDIQLPYRTYRAGWVFRNEKPGPGRFRQF 135

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q D D VG+    ADAEMCMMMADT+EA+GI R DY I +NNRK+LDG++E IGL G+D
Sbjct: 136 MQFDADIVGAPGVQADAEMCMMMADTMEALGIARGDYVIRVNNRKVLDGVMEAIGLGGED 195

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSEQIDIMVSFL 244
              +RL VLRAIDK DKFG++GVKLLLG GR D      GDFT GA L  E I+ ++  L
Sbjct: 196 NAGKRLTVLRAIDKRDKFGIEGVKLLLGPGRWDGGKEGEGDFTPGAGLDHETINNVILCL 255

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
              L               +   G  EL  I E+V  SGY  +RIKI  ++VRGLEYYTG
Sbjct: 256 RDPLAVIAQGGGW---ANASISTGLGELNTIEEIVVASGYGPDRIKIDPSVVRGLEYYTG 312

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+EA L F V NEK + V FGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ ALK+
Sbjct: 313 PVFEAELLFDVTNEKGQTVQFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMTALKN 372

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA----G---------IRAEMFL 411
           L   +          I     D D +  Y    Q LRTA    G         I  E+F 
Sbjct: 373 LGKLSGEAASGP---ILVTIMDRDRIGDYAKMAQELRTALNPLGGDGQPTGPTIPVELFQ 429

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           G+ K+F  QL+YADRR  P+AIIQG  E+  G L +KDL +GK ++  I +N  WREA+ 
Sbjct: 430 GNPKDFPKQLRYADRRGSPIAIIQGGNEKEAGKLIVKDLIEGKRIAETITDNAEWREAKA 489

Query: 472 AQITIPISELVSTVKKILQENKEE 495
            +  +  ++LV TVK++L E   +
Sbjct: 490 GEHLVDEADLVITVKRVLAEQASD 513


>gi|115522939|ref|YP_779850.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115516886|gb|ABJ04870.1| histidyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 533

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 258/503 (51%), Positives = 331/503 (65%), Gaps = 20/503 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           LRA LPRG AD    EI    +++++IR +YE YGF+P+ETP  EY+D+LGKFLPD+DRP
Sbjct: 29  LRARLPRGLADRGPAEIAATRQMVETIREVYERYGFEPVETPAFEYTDALGKFLPDQDRP 88

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           N+GVFSLQDDD QWISLRYDLTAPLARYVAENFD +  P R+YR G VFRNEK GPGRFR
Sbjct: 89  NEGVFSLQDDDEQWISLRYDLTAPLARYVAENFDNLPKPYRSYRHGWVFRNEKPGPGRFR 148

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF+Q D D VGS++  ADAEMCMM AD +EA+GI+R  Y + +NNRK+LDGIL+ IGL G
Sbjct: 149 QFMQFDADTVGSASPAADAEMCMMAADAMEALGIRRGSYVVKVNNRKLLDGILDAIGLDG 208

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----NSGDFTKGANLTSEQIDIMVS 242
           D+    RL VLRAIDK DKF    V+ LLG GR D      GDFTKGANL   QIDI++ 
Sbjct: 209 DENTGRRLTVLRAIDKADKFSPADVRKLLGNGRWDGGEEGKGDFTKGANLEDWQIDIILK 268

Query: 243 ---------FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                    F       ++     + + +     G +EL  I +LVR+SGY  +RI+I  
Sbjct: 269 TSVESDSQGFGLTGKTIALPNDKTVDEVSERYVAGRSELHDIQDLVRESGYGVDRIRIDP 328

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           ++VRGLEYYTG VYE  L     ++K +PV FGSVGGGGRYDGLVSRF+G+ VPATGFSI
Sbjct: 329 SVVRGLEYYTGPVYEVELLLETNDDKGRPVRFGSVGGGGRYDGLVSRFRGEPVPATGFSI 388

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+SRL  AL                 +     D D L+ YQ     LR+  IRAE++LG+
Sbjct: 389 GVSRLQAAL---GLIGKLKTRPAIGPVVVTVFDRDRLADYQKMVAQLRSVDIRAELYLGN 445

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSR---GMLQIKDLAKGKELSREIKNNESWREAR 470
            K+ GNQLKYAD+RN P  IIQG+ E++      + +KDL  G EL+   ++ + + + +
Sbjct: 446 PKSMGNQLKYADKRNSPCVIIQGSDEKNDPEGPQIIVKDLILGAELAALERDRDEYLQKQ 505

Query: 471 V-AQITIPISELVSTVKKILQEN 492
             AQ  +P  +L+  V++I+  +
Sbjct: 506 ADAQRKVPQLDLIDEVRRIMLRH 528


>gi|16127743|ref|NP_422307.1| histidyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221236564|ref|YP_002519001.1| histidyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|32130144|sp|Q9A2P3|SYH_CAUCR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|13425241|gb|AAK25475.1| histidyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220965737|gb|ACL97093.1| histidyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 495

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 224/488 (45%), Positives = 305/488 (62%), Gaps = 11/488 (2%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +  A  PRGFAD   +++R    IL+++  +YE YGF+ ++T   EY+D+LGKFLPD DR
Sbjct: 13  RPEARAPRGFADKRARDLRAERAILEAVSAVYERYGFEALDTGAFEYADALGKFLPDSDR 72

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           PN+GVF+LQDDD QW++LRYDLTAPLAR+ A+N++T+  P R Y  GPV+RNEK GPGRF
Sbjct: 73  PNEGVFALQDDDDQWMALRYDLTAPLARFAAQNWETLPKPFRRYAFGPVWRNEKPGPGRF 132

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQFIQCD D VGS+   ADAE+  M  + LEA G+ R    + INNRK+L+G+L   G  
Sbjct: 133 RQFIQCDADTVGSARPEADAEIIAMAVEGLEAAGLPRGTAVLKINNRKLLNGLLTAAGA- 191

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   ++L VLRA+DKLD+ G+ GV+LLLGEGR D SGDFTKGA L  + +D ++ F+ 
Sbjct: 192 --DSAGQKLAVLRAVDKLDRLGVDGVRLLLGEGRLDESGDFTKGAGLKGKAVDQVLDFVQ 249

Query: 246 IDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                    ++  +  +V G+  G++G  EL  I   +   G   ++  I  +IVRGLEY
Sbjct: 250 AGSTGGRAATLDNIARVVAGSAEGDEGLLELSRIDAALSSLGIADDQAFIDPSIVRGLEY 309

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG V+EA L     +EK   V FGS+GGGGRYD LV+RF G   PATGFS G+SRL  A
Sbjct: 310 YTGAVFEAELLLSTTDEKGNKVSFGSIGGGGRYDDLVARFTGNVTPATGFSFGVSRLAAA 369

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L++               +  +  D   + +Y      LR AGI AE++LG+S     Q+
Sbjct: 370 LRAAGREPGGAARGP---VVVITFDQAHMGEYFSVVGQLRAAGIAAEVYLGTSG-MKPQM 425

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           KYADRR  P  ++ G  E + G + IKDL  G+  +  + +N +W+  R  Q TIP  +L
Sbjct: 426 KYADRRGAPAVVMLGGDEIAAGTVTIKDLDAGRMAAEGLTDNAAWKAERPGQQTIPRDQL 485

Query: 482 VSTVKKIL 489
           V  V+KI+
Sbjct: 486 VDAVRKII 493


>gi|182678747|ref|YP_001832893.1| histidyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182634630|gb|ACB95404.1| Histidine--tRNA ligase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 500

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 255/497 (51%), Positives = 339/497 (68%), Gaps = 10/497 (2%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             +  A+LPRG  D     +   +++L +I+  YE YGF+ +ETP +EY+++LGKFLPD 
Sbjct: 7   PPRASAKLPRGLIDRGPAALAATDKMLATIKASYELYGFEAVETPFIEYTEALGKFLPDL 66

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
           DRPN+GVFS +DDD QW+SLRYDLTAPLARYVAE+FD +  P R+YR G VFRNEK GPG
Sbjct: 67  DRPNEGVFSFKDDDEQWLSLRYDLTAPLARYVAEHFDQLPKPYRSYRAGYVFRNEKPGPG 126

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           RFRQF+Q D D VG+++  ADAE+CMM A TLE +GIKR DY I +NNRK+LDG++E IG
Sbjct: 127 RFRQFMQFDADTVGAASVAADAEICMMAAQTLEKLGIKRGDYLIKVNNRKVLDGVMEAIG 186

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           L GD+    RL VLRAIDK D+ G +GV LLLG GR D SGDFTKGA L + QI  + + 
Sbjct: 187 LGGDENAGRRLTVLRAIDKFDRLGHEGVSLLLGAGRKDESGDFTKGAGLDATQIAQVFAL 246

Query: 244 L---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           L     D  +++    E+   T  G++G  EL  I+ELV  +G+ ++RI+I   +VRGLE
Sbjct: 247 LEAGGKDNAETVARFAEVFASTPRGQEGTAELKTIAELVEAAGF-ADRIRIDPAVVRGLE 305

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA L F V +++ +P+ FGSVGGGGRYDGLV RF+G++VPATGFSIG+SRL  
Sbjct: 306 YYTGPVFEAELTFEVQDDEGRPIRFGSVGGGGRYDGLVGRFRGEDVPATGFSIGVSRLFS 365

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL ++  S      M    +  +  D D +++YQ +   LR AGIR+E++LGSS     Q
Sbjct: 366 ALTAI-KSPIVTSSMQRGPVVVLVLDKDHVARYQGFVTALREAGIRSELYLGSSG-MNAQ 423

Query: 421 LKYADRRNCPLAIIQGTGER--SRG-MLQIKDLAKGKELSREIKNNESWREARV-AQITI 476
           LKYAD+R     IIQG+ ER  + G  + I+DLA G EL+   K+   + E R  AQ  +
Sbjct: 424 LKYADKRGSLCGIIQGSNERDHADGPQVTIRDLALGAELAASSKDRADYLELRAKAQFAV 483

Query: 477 PISELVSTVKKILQENK 493
           P SELV+ V+++L  + 
Sbjct: 484 PESELVAAVREVLARHG 500


>gi|302381384|ref|YP_003817207.1| histidyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192012|gb|ADK99583.1| histidyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 499

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 217/487 (44%), Positives = 299/487 (61%), Gaps = 14/487 (2%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           PRGFAD     +    RI+  +  +YE +GF+P++T   EY+D+LGKFLPD DRPN+GVF
Sbjct: 16  PRGFADRRGPSLIAERRIVQRVSEVYERWGFEPLDTGAFEYADALGKFLPDADRPNEGVF 75

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           +LQDDD QW++LRYDLTAPLAR+ A+N++T+  P R Y  GPV+RNEK GPGRFR+F QC
Sbjct: 76  ALQDDDDQWMALRYDLTAPLARFAAQNWETLPKPFRRYAFGPVWRNEKPGPGRFREFTQC 135

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
           D D VGS    ADAE+  M  + L+A G++     + ++NRK+ DG+ E  G+       
Sbjct: 136 DADTVGSDRPEADAEIIAMACEGLQAAGLQPGQAVVRVSNRKLFDGLFEAGGVTD---PG 192

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-- 249
           +RL  LRAIDK D+ G QGV  LLGEGR D SGD+TKGANL       + +FL    +  
Sbjct: 193 QRLTALRAIDKFDRLGWQGVAALLGEGRLDESGDYTKGANLPLGVAATIEAFLGSAGDGD 252

Query: 250 ----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               +++  +        AGE    EL  I   +       + ++   TIVRGLEYYTG 
Sbjct: 253 RTRAETLDAIARSGGLGAAGEAALEELAGIDRALGAMRVGQDAVRFDPTIVRGLEYYTGA 312

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+EA L     ++K +PV FGS+GGGGRYD LV+RF G++ PATGFS G+SRL  AL++ 
Sbjct: 313 VFEAELLLDTTDDKGRPVRFGSIGGGGRYDDLVARFTGESTPATGFSFGVSRLASALRAA 372

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                +    GPV++     D   +  Y      LR AGI AE++LG +     Q+KYAD
Sbjct: 373 GR--TDGAARGPVVVIVFGQDD--MQAYLDAVSELRNAGIAAELYLGRAG-MKAQMKYAD 427

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           RR  P AI+ G  E + G + IKDL  G++L+  + +NE+W+  R  Q+ +  +ELV+TV
Sbjct: 428 RRGAPAAIMLGGDEIAAGQVTIKDLDAGRQLAAGVTDNEAWKSERPGQMKVARNELVTTV 487

Query: 486 KKILQEN 492
           + I+  +
Sbjct: 488 RSIIDAS 494


>gi|89070905|ref|ZP_01158140.1| histidyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043544|gb|EAR49755.1| histidyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 548

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 239/552 (43%), Positives = 324/552 (58%), Gaps = 69/552 (12%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K    +A  P+GF D    E+  R  +L  I  IY  YGFD +E+  +E  ++LG
Sbjct: 1   MAKDKKQPRPKAVTPKGFRDYFGTEVTERAAMLSKIAAIYHAYGFDALESSAVETVEALG 60

Query: 58  KFLPDEDRPNKGVFSLQ--DDD--GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
           KFLPD DRPN+GVF+ Q  D+   G+W++LRYDLTAPLAR  A++ + +  P R Y +GP
Sbjct: 61  KFLPDVDRPNEGVFAWQEADEGDRGEWLALRYDLTAPLARVYAQHRNDLPAPYRRYAMGP 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+RNEK GPGRFRQF QCD D VG++   ADAE+C M+AD LEAVGI R DY I INNRK
Sbjct: 121 VWRNEKPGPGRFRQFYQCDADTVGAATVAADAEICAMLADALEAVGIPRGDYVIRINNRK 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L+G+LE  G+  D      ++ LRAIDK+D+ G +GV+ LLG GR D SGDFT GA+L+
Sbjct: 181 VLNGVLEVAGVGEDSPEIRGVV-LRAIDKIDRLGAEGVRHLLGRGRRDESGDFTSGADLS 239

Query: 234 SEQI----------------------------------------------DIMVSFLSID 247
            EQI                                              D + S L  +
Sbjct: 240 EEQIGIVMSFLTARDDAKADIEAGQIKMMPGFFTRSIFDGLEVTDARSVSDRLHSLLDDE 299

Query: 248 ---------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                       +   L  +V  +  G +G +E+  +++L+   GY  +RI +  ++VRG
Sbjct: 300 TGIGRQRLVNYATFTRLKNIVGASKQGNEGIDEVAEMADLLAIQGYGHDRIILDPSVVRG 359

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L YYTG V+EA L F + ++K +P  FGSV GGGRYD LV RF GQ VPATG SIG+ RL
Sbjct: 360 LGYYTGPVFEAELTFEITDDKGRPRQFGSVAGGGRYDDLVKRFTGQAVPATGISIGVDRL 419

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           + AL +   +        P  +     D D ++ YQ     LR AGIRAE++LG+ KNFG
Sbjct: 420 LAALTAKGRT----AAAAPGPVVVTVMDRDRMADYQAMVAELRQAGIRAEVYLGNPKNFG 475

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           NQLKYAD+R  P+AII+G  E++RG++Q+KDL  G +++ E    E W+E R +Q+ +P 
Sbjct: 476 NQLKYADKRGSPVAIIEGGEEKARGVVQVKDLVLGAKIA-ENATLEEWKE-RPSQVEVPR 533

Query: 479 SELVSTVKKILQ 490
            ELV+ V+ IL 
Sbjct: 534 GELVARVRAILD 545


>gi|167648636|ref|YP_001686299.1| histidyl-tRNA synthetase [Caulobacter sp. K31]
 gi|167351066|gb|ABZ73801.1| histidyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 498

 Score =  316 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 224/491 (45%), Positives = 312/491 (63%), Gaps = 14/491 (2%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +  A  PRGFAD   +++R    IL+++  +YE YGF+ ++T   EY+D+LGKFLPD DR
Sbjct: 13  RPEARNPRGFADKRARDLRAERAILEAVSAVYERYGFEALDTGAFEYADALGKFLPDSDR 72

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           PN+GVF+LQDDD QW++LRYDLTAPLAR+ A+N++T+  P R Y  GPV+RNEK GPGRF
Sbjct: 73  PNEGVFALQDDDDQWMALRYDLTAPLARFAAQNWETLPKPFRRYAFGPVWRNEKPGPGRF 132

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+FIQCD D VGS+   ADAE+  M  + L+A G+ R    + INNRK+L+G+L   G+ 
Sbjct: 133 REFIQCDADTVGSARPEADAEIIAMAVEGLQAAGLPRGAAVLKINNRKLLNGLLTAAGV- 191

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +   ++L VLRA+DKLD+ G++GV+LLLGEGR D SG FTKGA L  + ID ++ F+ 
Sbjct: 192 --ETQGQKLGVLRAVDKLDRLGVEGVRLLLGEGRLDESGAFTKGAGLMGKAIDSVLDFVQ 249

Query: 246 IDL-------EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                       ++  +  ++ G+  G++G  EL  I   ++  G   ++     +IVRG
Sbjct: 250 AGPMGGIGGRSDTLARIANVIGGSAEGDEGLEELAKIDAALKSLGVADDQALFEPSIVRG 309

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           LEYYTG V+EA L     ++K   V FGS+GGGGRYD LV+RF GQ  PATGFS G+SRL
Sbjct: 310 LEYYTGAVFEAELLLSTTDDKGASVSFGSIGGGGRYDDLVARFTGQVTPATGFSFGVSRL 369

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
             AL++       +       +  +  D   + +Y      LR AG+ AE++LG+S    
Sbjct: 370 AAALRAAGREPGGVARGP---VVVIAFDQAHMGEYFAVVTELRNAGVAAEVYLGTSG-MR 425

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            Q+KYADRR  P AI+ G  E + G + IKDL  G+EL+  + +N +W+  R  Q TIP 
Sbjct: 426 PQMKYADRRMAPAAIMLGGDEIAAGTVTIKDLDLGRELAAGVADNAAWKAERPGQQTIPR 485

Query: 479 SELVSTVKKIL 489
            ELV+ VKKI+
Sbjct: 486 GELVAAVKKII 496


>gi|85714818|ref|ZP_01045804.1| histidyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85698304|gb|EAQ36175.1| histidyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 486

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 246/487 (50%), Positives = 329/487 (67%), Gaps = 11/487 (2%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
             D P  E+R+   +L ++R +Y+ YGF+P++TP  EYSDSLGKFLPD+DRPN+GVFS +
Sbjct: 1   MRDVPASEVRLIESLLGNVRRVYDLYGFEPLDTPTFEYSDSLGKFLPDQDRPNEGVFSFK 60

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
            ++  W+SLRYDLTAPLARYVA     +  P R Y+ G V+RNEK GPGRF QF+Q D D
Sbjct: 61  MEEDAWVSLRYDLTAPLARYVALESQALAKPYRRYQSGYVYRNEKPGPGRFCQFMQFDAD 120

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN--- 191
            VG+    ADAE CM+MAD LEA GI R  Y + +NNRKILDG L+  GL  DD +N   
Sbjct: 121 TVGTEDLAADAEACMVMADALEACGIPRGGYLVKVNNRKILDGALDAAGLRLDDAINGQA 180

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL--- 248
            RL +LRAIDK DKFG++GV  LLG+GR D SGDFT+GA+L+ ++ID++ SF+++     
Sbjct: 181 RRLTILRAIDKFDKFGVEGVAQLLGKGRRDESGDFTRGADLSGKEIDLIFSFVNVGSGNR 240

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +  +  LV+ +  G +G  EL  I  ++   G+ S+RI I ++IVRGLEYYTG V+E
Sbjct: 241 RQLLDRISPLVETSAVGREGLAELDNIDSILTGCGFGSDRICIETSIVRGLEYYTGPVFE 300

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A L    +        FGSVG GGRYD LV+RF GQ VPATG SIG+SRLI A ++++  
Sbjct: 301 ADLQIEALGGNADVPRFGSVGSGGRYDDLVARFTGQKVPATGSSIGVSRLIAAFEAIK-- 358

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
           + +    GPV++  MD D      Y   TQ LR AGIRAEM+LGSS     QLKYADRRN
Sbjct: 359 SASPARNGPVVVLVMDRDKK--QAYMQMTQALRNAGIRAEMYLGSSG-MKAQLKYADRRN 415

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            PLAIIQGT ER  G ++IK+L +G   +  I +N++WR+  VAQI++  ++LV TV+++
Sbjct: 416 SPLAIIQGTDERQNGEVKIKNLIEGARAADSIADNKTWRQNNVAQISVTETKLVETVREM 475

Query: 489 LQENKEE 495
           L    ++
Sbjct: 476 LATIDQD 482


>gi|295691268|ref|YP_003594961.1| histidyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295433171|gb|ADG12343.1| histidyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 496

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 227/488 (46%), Positives = 309/488 (63%), Gaps = 11/488 (2%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +  A  PRGFAD   +++R    IL+++  +YE YGF+ ++T   EY+D+LGKFLPD DR
Sbjct: 14  RPEARSPRGFADKRARDLRAERAILEAVSAVYERYGFEALDTGAFEYADALGKFLPDSDR 73

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           PN+GVF+LQDDD QW++LRYDLTAPLAR+ A+N++T+  P R Y  GPV+RNEK GPGRF
Sbjct: 74  PNEGVFALQDDDDQWMALRYDLTAPLARFAAQNWETLPKPFRRYAFGPVWRNEKPGPGRF 133

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQFIQCD D VGS+   ADAE+  M  + LEA G+ R    + INNRK+L+G+L   G  
Sbjct: 134 RQFIQCDADTVGSARPEADAEIIAMAVEGLEAAGLPRGAAVLKINNRKLLNGLLTAAGA- 192

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   ++L VLRA+DKLD+ G+ GV+LLLGEGR D SGDFTKGA L  + +D ++ F+ 
Sbjct: 193 --DSAGQKLAVLRAVDKLDRLGVDGVRLLLGEGRLDESGDFTKGAGLKGQAVDQVLDFVQ 250

Query: 246 IDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                    ++  + +++ G+  G++G  EL  I   +   G   ++  I  +IVRGLEY
Sbjct: 251 AGSSGGRSATLDNIAKVIGGSAEGDEGLLELSRIDAALTSLGIADDQAFIDPSIVRGLEY 310

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG V+EA L     +EK   V FGS+GGGGRYD LV+RF G   PATGFS G+SRL  A
Sbjct: 311 YTGAVFEAELLLSTTDEKGNKVTFGSIGGGGRYDDLVARFTGNVTPATGFSFGVSRLAAA 370

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L++               +  +  D   + +Y      LR AGI AE++LG+S     Q+
Sbjct: 371 LRAAGREPGGAARGP---VVVIAFDDAHMPEYFSVVGELRAAGIPAEVYLGTSG-MRPQM 426

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           KYADRR  P AI+ G  E + G + IKDL  G+EL+  + +N +W+  R  Q TIP  +L
Sbjct: 427 KYADRRLSPAAIMLGGDEIAAGTVTIKDLDLGRELASGVADNAAWKAERPGQQTIPRGQL 486

Query: 482 VSTVKKIL 489
           V  V+KI+
Sbjct: 487 VDAVRKII 494


>gi|83945768|ref|ZP_00958112.1| histidyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83850858|gb|EAP88719.1| histidyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 497

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 226/503 (44%), Positives = 315/503 (62%), Gaps = 21/503 (4%)

Query: 1   MGKKT--KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M K    + +A  PRGF D     +R    ++ +   +YE +GF+P+ETP  EY+D+LGK
Sbjct: 1   MAKTKAFRPKARRPRGFEDRSAHVLRAERALVGAASAVYERWGFEPLETPAFEYADALGK 60

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           FLPDE+RPN+GVF++QDDD QW++LRYDLTAPLAR+ AENF  +  P R Y+ G V+RNE
Sbjct: 61  FLPDEERPNEGVFAMQDDDEQWMALRYDLTAPLARFAAENFQDLAKPFRRYQFGEVWRNE 120

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           K GPGRFRQF+QCD D+VG+    ADAEM  + ++ + AVG+  +++ I +N+R++LDG+
Sbjct: 121 KPGPGRFRQFVQCDADSVGAPGPAADAEMIALASEVMGAVGLGGDEFVIRVNDRRLLDGV 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           LE++G    +K   RL VLRAIDK+D+ GL+GV+LLLGEGR D SGDFT+GA L ++Q  
Sbjct: 181 LERLGDAASEK---RLRVLRAIDKMDRLGLEGVELLLGEGRKDESGDFTEGAGLEADQRR 237

Query: 239 IMVSFLS-----------IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
            ++ F+                + +  L + +  T AG+    +L  I+ ++   G  S+
Sbjct: 238 HVLKFIEAGQVGDALTGAARNAEVLKRLTDALGDTDAGKLAVADLETITSVLDALG-KSD 296

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
              + +++VRGL YYTG V+EA L      E   P+ FGSVGGGGRYD LVSRF GQ VP
Sbjct: 297 NWTLDTSVVRGLGYYTGPVFEAELLAEATYEDGSPIRFGSVGGGGRYDDLVSRFTGQAVP 356

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           ATGFS G+SR   AL +L+            L+  +  + D ++ Y      LR +G+RA
Sbjct: 357 ATGFSFGVSRFAAALSALKRLD---AAKADPLVIIVAAEKDRMADYFALAAELRASGLRA 413

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E       N G QLKYADRR    A+I G+ ER +G  QIKDL  G  L+ EI +N++WR
Sbjct: 414 E-AFIGGGNMGKQLKYADRREAEFAVIIGSEEREKGEAQIKDLKLGARLAAEISDNKTWR 472

Query: 468 EARVAQITIPISELVSTVKKILQ 490
           E + AQ T+   ++VS +K  L 
Sbjct: 473 EDQPAQFTVARDQIVSAIKDRLA 495


>gi|217976990|ref|YP_002361137.1| histidyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254782337|sp|B8ER30|SYH_METSB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|217502366|gb|ACK49775.1| histidyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 501

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 258/490 (52%), Positives = 336/490 (68%), Gaps = 10/490 (2%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
           A+LPRGF D    EI    ++L +IR  YE YGF+ +ETP +E++D+LGKFLPD DRPN+
Sbjct: 13  AKLPRGFGDRGPAEIAATEKMLAAIRASYELYGFEAVETPFIEFTDALGKFLPDLDRPNE 72

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           GVFS +DDD  W+SLRYDLTAPLAR+VAENFD +  P R+YR G VFRNEK GPGRFRQF
Sbjct: 73  GVFSFKDDDESWLSLRYDLTAPLARFVAENFDKLPKPYRSYRAGYVFRNEKPGPGRFRQF 132

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q D D VG+ +  ADAEMCMM ADTLE +G+KR DY I +NNRK+LDG+LE IGL G++
Sbjct: 133 MQFDADTVGAPSVAADAEMCMMAADTLERLGVKRGDYVIKVNNRKVLDGVLEAIGLGGEE 192

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
               R+ VLRAIDKLDKFG +GV LLLG GR D SGDFTKGA L    ++ ++++++   
Sbjct: 193 NAGRRMTVLRAIDKLDKFGPEGVALLLGPGRKDESGDFTKGAGLERTAVERVLNYVAAQG 252

Query: 249 E---KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E   + +  L   V G+  GE+G  EL  I+ L+  +G+ S RI+I  ++VRGLEYYTG 
Sbjct: 253 EGTAQMLGVLRASVAGSQRGEEGVAELAEIAALIDAAGF-SARIRIDPSVVRGLEYYTGP 311

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+EA L F V  E  KPV FGS+GGGGRYDGLV RF+G+NVPATGFSIG+SRL  ALK++
Sbjct: 312 VFEAELTFEVQGEDGKPVRFGSIGGGGRYDGLVGRFRGENVPATGFSIGVSRLYSALKAV 371

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            S   +        +  +  D + L++YQ +   LR+A IRAE++LG S     QLKYAD
Sbjct: 372 GSPIVSAASQPG-PVVVLVLDREHLARYQGFVTALRSADIRAELYLGGSG-MNAQLKYAD 429

Query: 426 RRNCPLAIIQGTGER--SRG-MLQIKDLAKGKELSREIKNNESWREARV-AQITIPISEL 481
           +R    A+IQG+ ER  + G  + I+DLA G EL+   K+   + E R  AQ T+    L
Sbjct: 430 KRGSLCAVIQGSNERDHAEGARVTIRDLALGAELAGASKDRADYLELRAKAQFTVAEQNL 489

Query: 482 VSTVKKILQE 491
           V  V++++  
Sbjct: 490 VDAVREVMAR 499


>gi|262276782|ref|ZP_06054575.1| histidyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262223885|gb|EEY74344.1| histidyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 474

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 214/488 (43%), Positives = 309/488 (63%), Gaps = 15/488 (3%)

Query: 1   MGKK-TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M KK +K   +LP GF D   KE+ IR+ ++  I+ +   YGF+ +ETP  EY++SLGKF
Sbjct: 1   MNKKISKPPVDLPGGFIDRKEKELVIRDFLIKQIKEVMTMYGFEFLETPSFEYTESLGKF 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD+DRP++GVFS +D   +W+SLRYDLTAPLAR+ A+NFD +  P + Y++G V+RNEK
Sbjct: 61  LPDKDRPSEGVFSFED-GKKWLSLRYDLTAPLARFTAKNFDNLSRPFKRYQLGTVWRNEK 119

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GPGRFR+F+Q D D VG++   AD+E+C++M + LE  G+  N+++I I+NRK+  G+L
Sbjct: 120 PGPGRFREFLQFDADYVGTNNLLADSELCVLMTEILEKCGLANNEFNIKISNRKLSKGLL 179

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E + +   ++   +   LRAIDKLD+ G+ GVKLLLG+GR D SGDFT+GA L  +QI  
Sbjct: 180 EDLEIIDQEQ---QSTSLRAIDKLDRVGIDGVKLLLGKGRKDKSGDFTEGAKLQDKQISK 236

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ FL+      + +L  +       ++G +EL  I +      +  N  KI   +VRGL
Sbjct: 237 IIEFLNSKG---LDQLERIDCKNQLFQEGISELKQIIKN--FKFFKFNNYKIDPAVVRGL 291

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           EYYTG ++EA L F V NEK   + FGS+GGGGRYD LV RFK Q+ PA G SIG+ RL+
Sbjct: 292 EYYTGPIFEAELTFKVKNEKGLDIEFGSIGGGGRYDDLVKRFKNQDCPAVGISIGLDRLL 351

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            AL        + K      +     D+  +  Y      LR+  I +E++ GSS NF  
Sbjct: 352 YALSQKNIFNFDQK----CPVLICVLDNKFMDYYFKILNSLRSNNINSEIYSGSS-NFKA 406

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           QLKYAD+R C   II G  E S+ ++ +K+L  G E+S +I++ E W++++ AQ T   S
Sbjct: 407 QLKYADKRGCKYVIICGEDEVSKELVTLKNLVIGSEISEDIESREDWKKSKDAQKTFAFS 466

Query: 480 ELVSTVKK 487
           +L+  +KK
Sbjct: 467 DLIKEIKK 474


>gi|254418299|ref|ZP_05032023.1| histidyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184476|gb|EDX79452.1| histidyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 496

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 214/503 (42%), Positives = 296/503 (58%), Gaps = 20/503 (3%)

Query: 1   MGKKTKLRA--ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M     LR     PRGFAD   +++    RI+  +  +YE +GF+P+ETP  EY+D+LGK
Sbjct: 1   MTDDAPLRPLARNPRGFADKRGRDLTAERRIVARVSEVYERWGFEPLETPAFEYADALGK 60

Query: 59  FLPDEDRPNKGVFSLQDDDG-----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
           FLPD DRPN+GVF+LQDD G     +W++LRYD TAPLAR+ A+ ++T+  P R Y  GP
Sbjct: 61  FLPDADRPNEGVFALQDDAGSDEPGEWMALRYDHTAPLARFAAQTWETLPKPFRRYAYGP 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+RNEK GPGRFR+F QCD D VGS    ADAE+  M  + L A G+      I ++NRK
Sbjct: 121 VWRNEKPGPGRFREFWQCDADTVGSDRPEADAEIIAMACEGLGAAGLDAGQAQIRVSNRK 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + DG+ +  G+       +RL  LRAIDK D+ G  GV  LLGEGR D+SGD+TKGA+L 
Sbjct: 181 LFDGLFDAGGVTE---AGQRLTALRAIDKFDRLGWDGVVQLLGEGRLDDSGDYTKGASLP 237

Query: 234 SEQIDIMVSFL------SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
           +     + +FL       +   +++  +        AGE   NEL  I   +        
Sbjct: 238 ARVTGAIEAFLASANTPGLSRAETLDAVARSGDLGAAGEAALNELAAIDRALGAMRVGQE 297

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
            +K   TIVRGLEYYTG V+EA L     ++K +PV FGS+GGGGRYD LV+RF GQ+VP
Sbjct: 298 AVKFDPTIVRGLEYYTGAVFEAELLLETTDDKGRPVRFGSIGGGGRYDDLVARFTGQSVP 357

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           ATGFS G+SRL  AL++      +        +  +    D ++ Y      LR AGI A
Sbjct: 358 ATGFSFGVSRLASALRAAGRGAEDAVRGP---VVVIVFSDDDMAHYLAAVAELRAAGIAA 414

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E++LG +     Q+KYADRR  P  +I G  E + G + IKDL  G+  +  I +N++W+
Sbjct: 415 ELYLGRAG-MKAQMKYADRRGSPAVVILGGDEIAAGEVTIKDLDAGRAAAAGITDNDAWK 473

Query: 468 EARVAQITIPISELVSTVKKILQ 490
             R  Q+ IP   L++ ++ I++
Sbjct: 474 AERPGQMKIPREGLIAAIQAIIE 496


>gi|114705320|ref|ZP_01438228.1| histidyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114540105|gb|EAU43225.1| histidyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 557

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 261/542 (48%), Positives = 335/542 (61%), Gaps = 65/542 (11%)

Query: 1   MGKKTKLR---AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K +     LPRGF D   +++R +  +L +IR +YE+YGF+P+ETP+ E++D+LG
Sbjct: 1   MVKDKKPKRVAPRLPRGFVDREAQDLRAQEDMLATIRRVYESYGFEPVETPVFEFTDALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAEN++++  P R+YR G VFRN
Sbjct: 61  KFLPDSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARFVAENYESLPKPYRSYRAGYVFRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF+Q D D VG+   +ADAEM MMMADT+EA+GI R  Y I +NNRK+LDG
Sbjct: 121 EKPGPGRFRQFMQFDADIVGAPNVSADAEMAMMMADTMEALGIPRGQYVIRVNNRKVLDG 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +LE IGL G++    RL VLRAIDK+D+ G++G   L+  GR D SGDFT G NLT +Q+
Sbjct: 181 VLEAIGLGGEENAGRRLGVLRAIDKVDRVGVEGFISLVTNGRKDESGDFTPGQNLTDDQV 240

Query: 238 DIMVS---------------------------------------------------FLSI 246
           + ++                                                     L  
Sbjct: 241 NTLIPVFINTAAVGVEFGVRDGVLFTTEKSVLSDNEHRSRALNVISSKIGAANAAAALDH 300

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D   ++  L E V G+  G +G  +L   +   R +GY  NRIK+  + VRGLEYYTG V
Sbjct: 301 DDLNAIVYLLEYVSGSSVGVEGVWQLFDAAAHWRAAGYERNRIKLDLSCVRGLEYYTGPV 360

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EA L F V+NEK + V FGSVGGGGRYDGLVSRF  Q VPATGFSIG+SRL+ ALK+L 
Sbjct: 361 FEAELLFDVVNEKGQKVQFGSVGGGGRYDGLVSRFMSQPVPATGFSIGVSRLMTALKNLG 420

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-----G---IRAEMFLGSSKNFG 418
                 +      +     D D ++ YQ     LR A     G   +  E+F G+ K FG
Sbjct: 421 RLETEQRTGP---VVVTVMDRDRMADYQAMATTLRAALNADPGKPPVPVEVFQGNPKKFG 477

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           NQL+YADRRN P  +IQG  E++ G +Q+KDLA GKE+S  I +N  WREAR  Q T+  
Sbjct: 478 NQLQYADRRNSPCVVIQGADEKAAGKVQVKDLALGKEMSAGITDNAEWREARAGQETVDE 537

Query: 479 SE 480
           SE
Sbjct: 538 SE 539


>gi|269836508|ref|YP_003318736.1| histidyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269785771|gb|ACZ37914.1| histidyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 455

 Score =  304 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 143/488 (29%), Positives = 246/488 (50%), Gaps = 53/488 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            ++ +G  D   +++ +R  ++ + R ++E YGF+PIETP+LEY D L     ++    K
Sbjct: 12  PQVLKGMRDILPQQMVLRQHVISTFRRVFERYGFEPIETPVLEYLDVLTGKYGED---EK 68

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D  G+ + +RYDLT PLAR+VA +   + FP + Y I PVFR ++   GR+RQF
Sbjct: 69  LIYHFTDRGGREVGMRYDLTVPLARFVATHRHELSFPFKRYHIEPVFRADRPQRGRYRQF 128

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            QCD D VG+++  ADAE+ M+  D L A+ +   ++ I IN+RK+L  + +  G+    
Sbjct: 129 WQCDADIVGTASMLADAEVIMVWIDALSAIHM--PNFVIHINHRKLLQSMAQFAGVPEAQ 186

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
            +       RAIDKL K G +GV+  + +              ++ E  D ++  + ++ 
Sbjct: 187 AVTIH----RAIDKLGKIGREGVREEMLQN------------GISPEAADRVLDLVELEG 230

Query: 249 EKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           E    + EL   + G    ++G  +L  +   + +   +     +   + RGL+YYTG V
Sbjct: 231 EPEVVLAELRTRLAGNQLAQEGIADLEELFRYLGEMNADPKHYCLDLALARGLDYYTGPV 290

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EA++  P           GS+GG GRYD L+  F G+++PATG S+G+ R+I  ++ L 
Sbjct: 291 FEAMVSEP---------NIGSLGGAGRYDHLIGMFLGEDIPATGASLGLERIIDVIQELN 341

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        +       + L     +   LR AGI AE++LG  ++   Q++YADR
Sbjct: 342 LLPQPR---TVTDVLVTIFGDEELGASLGFVSQLRAAGINAEVYLGERRDLRRQMQYADR 398

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           +  PLA   G  E + G + ++ +A G++                   T+P+ E V T+ 
Sbjct: 399 KGIPLAAFLGPEEIAAGTVNLRVMASGEQ------------------FTVPVGEAVDTID 440

Query: 487 KILQENKE 494
           ++    ++
Sbjct: 441 RLRVRERD 448


>gi|254293323|ref|YP_003059346.1| histidyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254041854|gb|ACT58649.1| histidyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 503

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 206/497 (41%), Positives = 299/497 (60%), Gaps = 12/497 (2%)

Query: 1   MGKK-TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  +  +  A  PRGF D     I     ++D +  +Y  +GF+ ++T   EY D+LGKF
Sbjct: 14  MSTETPRPEARKPRGFQDKRAHLIAAERHLVDKVTQVYAQWGFEGLDTGPFEYVDALGKF 73

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           LPD DRPN+GVF+L+DDD QW++LRYD TAPLAR+VAEN++ I  P R Y  GPV+RNEK
Sbjct: 74  LPDTDRPNEGVFALEDDDDQWMALRYDHTAPLARFVAENWNNIPKPFRRYSAGPVYRNEK 133

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GP RFR+FIQCD D VG++   ADAEM  + ++ ++A G +  DY I +N R++LDG++
Sbjct: 134 PGPFRFREFIQCDADAVGAAGPAADAEMIAIASEAMQACGAQVGDYAIRVNTRQLLDGVM 193

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +   +      N+RLIVLRA+DK+D+ G +GV  LLG GR D SGDFT+GA L S  I+ 
Sbjct: 194 QAADVKD---PNKRLIVLRALDKMDRLGAEGVSELLGGGRKDESGDFTEGAGLNSASIET 250

Query: 240 MVSFLSIDLE---KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           ++ F     +   ++++ L  +      G +G  +L  I +++   G           IV
Sbjct: 251 LLQFAQAGRDTRSETLNALAAIANQNAVGTQGLEDLSAIHDILNGLGVTDQMATFDPAIV 310

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L     +EK + + FGSVGGGGRYD L++RF G+ VPATGFS+GIS
Sbjct: 311 RGLEYYTGPVFEAELLKEFKDEKGRLMRFGSVGGGGRYDDLIARFTGELVPATGFSVGIS 370

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL   L + +      ++     +  +    + ++ Y      LR  G++AE++LG+S  
Sbjct: 371 RLAAVLAAED----EGEQKADGPVVVLALQREHMADYCSIAAQLRAIGVKAEVYLGTSG- 425

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYA+RRN P  +I G  ER  G + +KDL  G + + +I +N  WREAR  Q   
Sbjct: 426 MKAQMKYANRRNAPAVVIVGNQERESGKVTVKDLVAGAKAAADITDNAEWREARPGQFEA 485

Query: 477 PISELVSTVKKILQENK 493
              +  + +K +++ N 
Sbjct: 486 TREDFAAKIKAVVEANN 502


>gi|329847934|ref|ZP_08262962.1| histidyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328842997|gb|EGF92566.1| histidyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 494

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 217/490 (44%), Positives = 307/490 (62%), Gaps = 15/490 (3%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +  A  PRGFAD    +I +  R+++++  +YE++GF+ ++TP  EY+D+LGKFLPD DR
Sbjct: 13  RPEARSPRGFADKRASQIALERRLVETVTKVYEDFGFEALQTPAFEYADALGKFLPDSDR 72

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           PN GVF+LQDDD QW++LRYDLTAPLAR+ A+N+D +  P R Y  GPV+RNEK GPGR 
Sbjct: 73  PNVGVFALQDDDDQWMALRYDLTAPLARFAAQNWDGLPKPFRRYAFGPVYRNEKPGPGRL 132

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+FIQCD D VG+    ADAE+  +     +A G+      + INNRK+L+G+L  +G+ 
Sbjct: 133 REFIQCDADTVGTDRPEADAEIIALAVAGFKAAGVPAL---LRINNRKLLNGLLTSLGVT 189

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
           G D+      VLRAIDKLD+ G+ GV+LLLG+GR D+SGDFTKGA L    I  ++ F+ 
Sbjct: 190 GPDQQMA---VLRAIDKLDRLGVPGVELLLGKGRKDDSGDFTKGAGLADTAIRPVLDFVM 246

Query: 246 IDLEKS-----MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     +  L  ++     G+ G  +L  I   +   G + +      +IVRGLE
Sbjct: 247 AAEGGAARSLVLQRLGHVLANFPEGQAGLEDLTRIDTALTALGVSDSAAVFEPSIVRGLE 306

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA L     +EK + V FGSVGGGGRYD LV+RF G+ VPATGFS G+SRL  
Sbjct: 307 YYTGAVFEAELLLETRDEKGEMVRFGSVGGGGRYDDLVARFTGERVPATGFSFGVSRLAA 366

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+ +E    N        I  ++     +  Y      +R AG+ AE++LG S     Q
Sbjct: 367 ALRLVEGDKANAARGP---IVIINFSESDMGAYFQLAAEIRAAGLAAEVYLGRSG-MKAQ 422

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           +KYADRR  P A++ G  E + G + IKDL  G++L+ +I +N++WRE R  Q+T+P +E
Sbjct: 423 MKYADRRLSPAAVMIGGDELNNGTVTIKDLDLGRDLALQISDNKAWREGRPGQVTLPRAE 482

Query: 481 LVSTVKKILQ 490
            ++ +K I++
Sbjct: 483 AINHLKSIVK 492


>gi|269926347|ref|YP_003322970.1| histidyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790007|gb|ACZ42148.1| histidyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 439

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 146/471 (30%), Positives = 227/471 (48%), Gaps = 37/471 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M    +L  +  RGF D   + + +R  ++ +   I+E YGF P+ETP LEY+++     
Sbjct: 1   MS--DRLNPQRLRGFRDFLPESMALRKYVIRTFEEIFERYGFLPLETPSLEYAETFE--G 56

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                    ++   D  G+ + LRYDLT PLAR V  +   +  P + Y I PV+R E+ 
Sbjct: 57  KSSTEAETLMYKFVDAGGRRVGLRYDLTVPLARVVGMH-PDLPMPFKRYHIAPVWRAERP 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F QCDVD VGS    ADAE+  +++D L AVG K  +Y + IN+RKIL  +  
Sbjct: 116 QKGRYREFWQCDVDIVGSDEPAADAEILAIISDCLSAVGFK--EYRVLINHRKILSAMAR 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G   +    + + V RAID+L K G  GV+  L                L+ +  D +
Sbjct: 174 VAGASPE----QAVHVYRAIDRLSKVGADGVRQELI------------QLGLSPDSSDRL 217

Query: 241 VSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++ ++I+ +    +  L  L++    G +  NEL  I  L+     N N   I  ++ RG
Sbjct: 218 IALINIEGDADTVLSHLERLLEDQPEGIQAINELRSILNLLSNYNVNMNSYLIQPSLARG 277

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG V+E ++  P           GSV GGGRYD LV  F G+ +P  G S+G+ R+
Sbjct: 278 LDYYTGAVFETVVDEPK---------VGSVTGGGRYDELVGIFAGKKIPTVGTSLGLERI 328

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I  L+ L   T          +     D+  ++        LR  GI+ E++LG   +  
Sbjct: 329 IDVLEELGLMTPPRVSAD---VFVTVFDTSCIASSIQIAANLRRKGIKTELYLGKPGSLR 385

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            QL YA R   P  II G  E +   + ++D+  G++    +       ++
Sbjct: 386 KQLTYASRLGIPWVIIAGPDELANNEVTLRDMQSGEQKRLPLHELPEHIKS 436


>gi|221633028|ref|YP_002522253.1| histidyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155481|gb|ACM04608.1| histidyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 462

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 157/487 (32%), Positives = 249/487 (51%), Gaps = 50/487 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            ++ RG  D   +++ +R R+++ +R ++E YG+DPI+TPLLEY + L GK+  +     
Sbjct: 17  PQVLRGMRDFTPRQMLLRQRVMEVLRQVFERYGYDPIDTPLLEYYEVLSGKYGEEG---E 73

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++   D  G+ + LRYDLT PLARYVA +   + FP + Y IGPVFR E+   GRFRQ
Sbjct: 74  KLLYRFVDQGGREVGLRYDLTVPLARYVAVHRAELTFPFKRYHIGPVFRAERPQRGRFRQ 133

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCDVD VG+ +  ADAE+  +  D L A+  +  +  I +N+R++L+ ++   G+   
Sbjct: 134 FWQCDVDVVGTRSMMADAEVLSVWIDALGAL--RIPNAVIHVNHRQLLEALVRAAGVAPS 191

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                 L V RAIDKL K GL GV+  L     +        A +           L  +
Sbjct: 192 ----LALGVFRAIDKLAKIGLDGVREELLRIGVEAPAAERVLAAIA----------LRGE 237

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            E  + +L  +  G  A E+  +EL  +   +   G       +  ++ RGL+YYTG V 
Sbjct: 238 PESIIPQLRVMFAGDEAAERAVSELAELFRYLEWFGVRPGSAIVDLSLARGLDYYTGPVA 297

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           EAI+  P           GS+GG GRYD L+  F G+ +PATG S+G+ RL+  +     
Sbjct: 298 EAIVSEP---------AIGSLGGAGRYDHLIGLFLGEEIPATGASLGLERLVEVVDEYGL 348

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                       +  +  ++D  ++     + LR AG+  E++LG   +   QL+YADR+
Sbjct: 349 LPTPAS---VTEVLVVSVEADHRAQALRIARELRQAGLDTEVYLGERIDLRRQLQYADRK 405

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P+A+I G  E +  M+ ++DL  G+++                   +P +ELV+ V+K
Sbjct: 406 GVPVAVIIGPDEIANDMVTVRDLRTGEQV------------------RVPRAELVAAVRK 447

Query: 488 ILQENKE 494
            L   ++
Sbjct: 448 PLGAARQ 454


>gi|114797537|ref|YP_759306.1| histidyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114737711|gb|ABI75836.1| histidyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 497

 Score =  289 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 221/488 (45%), Positives = 299/488 (61%), Gaps = 12/488 (2%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
           A  PRGF D     I  + R+++++  +Y  +GF+ ++T   EY+D+LGKFLPD DRPN 
Sbjct: 19  ARKPRGFPDKRESLIHAQARLVETVTGVYRQWGFEALDTGAFEYADALGKFLPDADRPNA 78

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           GVFS+QDDD QW++LRYDLTAPLAR+VAE    +  P R Y  GPV+RNEK GPGRFR+F
Sbjct: 79  GVFSMQDDDAQWMALRYDLTAPLARFVAEQGQGLGRPFRRYAAGPVWRNEKPGPGRFREF 138

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            QCD D VG+    ADAEM  M A+ L A+G+K  ++ I +N R++L+G+L+ +G  G D
Sbjct: 139 WQCDADTVGAPGFHADAEMIAMGAEALRAIGMKPGEFVIRVNTRRLLNGVLDGVGATGAD 198

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
               RL +LRA+DKLD+ G  GV  LLG GR D SGDFTKGA L  E+I  +++F     
Sbjct: 199 ---IRLAILRALDKLDRLGASGVADLLGAGRKDESGDFTKGAGLGPEEIKRVLAFAEAGA 255

Query: 249 EKSMHELYELVKGTIAGEKGFN---ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +     L  L K T + E+G     EL  I+  +   G   + +KI  ++VRGLEYYTG 
Sbjct: 256 DTRAMTLANLAKATGSTEEGKAGLGELEAIALALEALGAPEDDVKIDPSVVRGLEYYTGP 315

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+EA L   V  E  K    GS+GGGGRYD LV+RF G+ VPATGFSIGISRL  AL  +
Sbjct: 316 VFEAELLREVTGEDGKTYRIGSIGGGGRYDDLVARFTGETVPATGFSIGISRLAAALAIM 375

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                         +  ++ D D+          LR  GIRAE ++G+S     Q+KYAD
Sbjct: 376 GEGGKLDGP-----VVVLNLDKDNPGVALGLAAELRRGGIRAEAYMGASG-MRPQMKYAD 429

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           RRN P  +I G  E  +G + IKDL  G + ++ I +NE +REAR  QI +P + ++  V
Sbjct: 430 RRNSPAVVIVGGDELEKGTVTIKDLEIGAQKAKAISSNEEYREARPGQIEVPRAGMIEAV 489

Query: 486 KKILQENK 493
           + I++  +
Sbjct: 490 RAIVEAQR 497


>gi|302389916|ref|YP_003825737.1| histidyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200544|gb|ADL08114.1| histidyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 423

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 107/467 (22%), Positives = 185/467 (39%), Gaps = 50/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   +E      + +  R I   +G+  I TP  E+++   + + +  D 
Sbjct: 1   MLTKAPRGTRDLLPEECTKWVFLENIFREICGQFGYREIRTPTFEHTELFQRGIGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+L+ + TAP+AR   E+       P + + I P FR E+   GR
Sbjct: 61  VEKEMYTFSDKSGRSITLKPEGTAPVARAYIEHKLYNKPMPVKLFYITPCFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+F Q  ++  GS +   D E+  +    L+ +G+   +  I     +      E    
Sbjct: 121 QREFHQFGIEAFGSPSPLIDVEVITLAVFFLKRLGLDSLEVRINSIGCERCR---EDYKK 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +D L E+   L       + G   +++L  +           G      +  +++ +L
Sbjct: 178 ALEDFLFEKANSL-CDTCKVRLGRNTLRILDCKD---------PGCQKLLVEAPVILEYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +      E+ + +                            +  +   IVRGL+YYT 
Sbjct: 228 CDNCRGHFDEVKKGLSAL-----------------------DVKYSVDPGIVRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E I         +      +V GGGRYD LV    G   PA GF IGI RLI+ L++
Sbjct: 265 TVFEII--------SKDLGAQSTVCGGGRYDHLVEECGGPPTPAAGFGIGIERLIMVLEA 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                    +M    +     D             LR AG  AE      ++   Q+KYA
Sbjct: 317 NGLLDIPPIQMD---VFIAVLDETYRDYGLKLLYRLRMAGFSAETDY-VGRSLKAQMKYA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           D+     A I G  E   G++ +KDL  G++     +  E++ + ++
Sbjct: 373 DKIPSKYAFIIGEDEVKTGIITVKDLTTGEQEKVPCEEVETYLKNKI 419


>gi|225175514|ref|ZP_03729508.1| histidyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168843|gb|EEG77643.1| histidyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 471

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 105/467 (22%), Positives = 198/467 (42%), Gaps = 52/467 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           ++PRG  D    +I       + +R +   +G+  I TP+ E+++   + + +  D   K
Sbjct: 52  KVPRGTRDILPGDIETWQFFEEKVRELCRLFGYSEIRTPIFEHTELFLRGVGEVTDIVAK 111

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRFRQ 127
            +++  D   + ++LR + TA +AR  AE+       P + Y IGP+FR ++   GR+RQ
Sbjct: 112 EMYTFTDRGDRSLTLRPEGTASVARAYAEHKLYGDAQPIKVYYIGPMFRYDRPQAGRYRQ 171

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLHG 186
           F Q  V+  G+S  T DAE+  +      ++G+      I      +      +K+    
Sbjct: 172 FHQFGVEVFGTSEPTLDAEVMALSLVFFRSLGLTEFTLEINSVGCPQCRRAYRDKLQEEL 231

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +K++         D  D++    +++L  + + +   D T  A L       M+  L  
Sbjct: 232 KEKVDGL-----CPDCADRYDKNPLRIL--DCKNNKCQDITGDAPL-------MLGSLCG 277

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + ++    + E +                            +  ++  +VRGL+YYT   
Sbjct: 278 ECDEHFTAVQEAMDAL-----------------------GEQYVVNPRLVRGLDYYTKTA 314

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +                S+GGGGRYD L+S   G +VP  GF+IGI R+++AL++  
Sbjct: 315 FEIVSP--------VLGAQSSIGGGGRYDQLLSTIGGPDVPGIGFAIGIERVLLALEAAG 366

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +     +  G + +      +            LR AG+ AE      ++   Q+KYAD+
Sbjct: 367 TLP---EAGGVLDVYVATAGAVPAPVALRLAMDLRGAGLAAEKDY-LGRSLKAQMKYADK 422

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +     +I G  E  RG   ++D+  G +    + +   +   +V +
Sbjct: 423 KQAKFLVILGDEEMQRGQATVRDMKDGSQQDVALADLVGYLAGQVKE 469


>gi|218515814|ref|ZP_03512654.1| histidyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 423

 Score =  284 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 266/416 (63%), Positives = 313/416 (75%), Gaps = 2/416 (0%)

Query: 81  ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
           +SLRYD+TAPLAR+VAENF+ I  P RTYR G VFRNEK GPGRFRQF+Q D D VG+  
Sbjct: 1   MSLRYDMTAPLARHVAENFNEIQMPYRTYRAGYVFRNEKPGPGRFRQFMQFDADTVGAPG 60

Query: 141 ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
             ADAEMCMMMADTLEA+GIKR DY I +NNRK+LDG+LE IGL GDDK  +RL VLRAI
Sbjct: 61  VQADAEMCMMMADTLEALGIKRGDYVIRVNNRKVLDGVLEAIGLGGDDKAGQRLNVLRAI 120

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSMHELYELV 259
           DKLDKFG +GV LLLG GR D SGDFTKGA L   QID ++ F+ I D  +S  +L ELV
Sbjct: 121 DKLDKFGPEGVALLLGPGRKDESGDFTKGAGLDQAQIDKVLFFVGIADYAESAGQLAELV 180

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
            GT  G +G  EL  I  LV  +GY S+RIKI  ++VRGLEYYTG VYEA L F V NEK
Sbjct: 181 AGTSKGGEGVEELNFIGALVASAGYQSDRIKIDPSVVRGLEYYTGPVYEAELSFDVTNEK 240

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
            + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ ALK+L     +      VL
Sbjct: 241 GEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMTALKNLGKLGASEVTEP-VL 299

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +T MD D +++ +YQ  TQ LR AGIRAEMF G+ K FGNQLKYADRR CP+AIIQ   E
Sbjct: 300 VTVMDGDVEAMGRYQKMTQALRAAGIRAEMFQGNWKKFGNQLKYADRRGCPVAIIQCGDE 359

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           R+ G++QIKDL +GK LS EI++N SWREARVAQ T+P ++LV+ V++IL    E+
Sbjct: 360 RATGVVQIKDLIEGKRLSGEIEDNASWREARVAQETVPEADLVAKVREILAVQAED 415


>gi|138896141|ref|YP_001126594.1| histidyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166227970|sp|A4IR95|SYH_GEOTN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|134267654|gb|ABO67849.1| Histidyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 426

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 105/473 (22%), Positives = 189/473 (39%), Gaps = 51/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    E      +    R++   YG++ I TP+ E+++   + + D  D 
Sbjct: 1   MAFQIPRGTQDLLPGETEKWQYVEQVARDLCRRYGYEEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TAP+ R   E+        P + Y  GP+FR E+   G
Sbjct: 61  VQKEMYTFEDKGGRALTLRPEGTAPVVRAFVEHKLYGSPNQPVKLYYAGPMFRYERPEAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           RFRQF+Q  V+ +GSS    DAE+  +     +A+G+K     I    +        E +
Sbjct: 121 RFRQFVQFGVEAIGSSDPAIDAEVMALAMHIYKALGLKHIRLVINSLGDVDSRRAHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H  D+++E        D   +     +++L  +   D+                 ++ 
Sbjct: 181 VRHFSDRIHEL-----CPDCQARLETNPLRILDCKKDRDHELMA---------SAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++ + +                               I S +VRGL+YY
Sbjct: 227 YLNDESSAYFEKVKQYLT-----------------------MLDIPFVIDSRLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E       M+E +      ++ GGGRY+GLV    G   P  GF++ I RL+ AL
Sbjct: 264 NHTTFEI------MSEAEGFGAAATLCGGGRYNGLVQEIGGPETPGIGFALSIERLLAAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++        + +   ++        +  +       LR AG+R E      +    QLK
Sbjct: 318 EAEGIELPIHRGIDCYVVAV---GERAKDETVRLVYELRRAGLRVEQDY-LGRKMKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            ADR       I G  E  +    +K +A G++    +    S+   R  +  
Sbjct: 374 AADRLGASFVAIIGDEELEKQTAAVKHMASGEQTDVPLGELASFLIERTKREE 426


>gi|121535603|ref|ZP_01667410.1| histidyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305843|gb|EAX46778.1| histidyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 421

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 103/464 (22%), Positives = 186/464 (40%), Gaps = 52/464 (11%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           PRG  D           I  + R++   Y +  I TP+ E+++   + + +  D  +K +
Sbjct: 6   PRGTKDILPDTSGYWQYIEQAARDLCRLYAYQEIRTPIFEHTELFLRGIGETTDIVSKEM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D  G+ I+LR + TA + R   E+   T   P + + IGP+FR ++   GR RQF 
Sbjct: 66  YTFTDRGGRSITLRPENTAAVVRSYLEHKLYTAPQPVKVFYIGPMFRYDRPQAGRLRQFH 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIGLHGDD 188
           Q  ++ +G+     DAE+  +     E +G+   +     +   +      E++     D
Sbjct: 126 QFGIEAIGAPGPAVDAEIIALAVQFFEQLGLTGLELNINSVGCPRCRPIYRERLQNFLRD 185

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           KL E        D   +F    +++L  +          +     S+    +V  L  + 
Sbjct: 186 KLFEL-----CRDCQSRFERNPLRILDCKN---------ETCGALSQGAPRIVDCLCDEC 231

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                +L E++                            R  ++  +VRGL+YYT   +E
Sbjct: 232 TSHFVKLQEMLAAA-----------------------GIRYTLNPRLVRGLDYYTKTAFE 268

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                             ++ GGGRYDGL+    GQ  PA GF+IG+ R+++AL+     
Sbjct: 269 IQYPL--------LGAQSAICGGGRYDGLIEECGGQPTPAIGFAIGLERVLLALEKQALL 320

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                  G + +        + +        LR AGI  +M    S+    Q+K+A++  
Sbjct: 321 PMT---AGGIDVFIAPIGERAQAVAFELLCRLRRAGITCDMDF-MSRGIKAQMKHANKYP 376

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              A I G  E +RG + +K++  G++ +    + E    A   
Sbjct: 377 ARFAAIIGDDEVARGQVTLKNMESGEQEAVAFGDVEQKLRAETG 420


>gi|196250095|ref|ZP_03148789.1| histidyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196210279|gb|EDY05044.1| histidyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 426

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 106/473 (22%), Positives = 190/473 (40%), Gaps = 51/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    E      +    R++   YG++ I TP+ E+++   + + D  D 
Sbjct: 1   MAFQIPRGTQDLLPGETEKWQYVEQVARDLCRRYGYEEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TAP+ R   E+        P + Y  GP+FR E+   G
Sbjct: 61  VQKEMYTFEDKGGRALTLRPEGTAPVVRAFVEHKLYGSPNQPVKLYYAGPMFRYERPEAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           RFRQF+Q  V+ +GSS    DAE+  +     +A+G+KR    I    +        E +
Sbjct: 121 RFRQFVQFGVEAIGSSDPAIDAEVMALAMHIYKALGLKRIRLVINSLGDVDSRRAHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H  D+++E        D   +     +++L  +   D+                 ++ 
Sbjct: 181 VRHFSDRIHEL-----CPDCQVRLETNPLRILDCKKDRDHELMA---------SAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++ + +                               I S +VRGL+YY
Sbjct: 227 YLNDESRAYFEKVKQYLT-----------------------MLDIPFVIDSRLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E       M+E +      ++ GGGRY+GLV    G   P  GF++ I RL+ AL
Sbjct: 264 NHTTFEI------MSEAEGFGAAATLCGGGRYNGLVQEIGGPETPGIGFALSIERLLAAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++        + +   ++        +  +       LR AG+R E      +    QLK
Sbjct: 318 EAEGIELPIHRGIDCYVVAV---GERAKDETVRLVYELRRAGLRVEQDY-LGRKMKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            ADR       I G  E  +    +K +A G++    +    S+   R  +  
Sbjct: 374 AADRLGASFVAIIGDEELEKQTAAVKHMASGEQTDVPLGELASFLIERTKREE 426


>gi|315500225|ref|YP_004089028.1| histidyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315418237|gb|ADU14877.1| histidyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 499

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 211/492 (42%), Positives = 292/492 (59%), Gaps = 19/492 (3%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +  A  PRGFAD    +I +  R++  +  +YE +GF+ ++T   E++D+LGKFLPD DR
Sbjct: 15  RPEARAPRGFADKRASQIAVERRLIAKVSEVYELFGFEALQTSAFEFADALGKFLPDADR 74

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           PN GVFSLQDDD QW++LRYD TAPLAR+ A+N+D +  P R Y  GPV+RNEK GPGR 
Sbjct: 75  PNVGVFSLQDDDDQWMALRYDHTAPLARFAAQNWDALPKPFRRYAFGPVWRNEKPGPGRL 134

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F+QCD D VG+    ADAE+  +      A  +      + INNRK+L+G+L  +G  
Sbjct: 135 REFMQCDADTVGTDRPEADAEIIALAVAGFRANNLP---TVLKINNRKLLNGLLSALGA- 190

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL- 244
             D   +++ VLRAIDKLD+ GL+GV+LLLG GR D SGDFTKGA L  + I  ++ F+ 
Sbjct: 191 --DSPAQQMGVLRAIDKLDRLGLEGVELLLGGGRKDESGDFTKGAGLNDKAIAAVLGFVA 248

Query: 245 --------SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
                     +    + +L  ++  +  G+ G  +L  IS  +   G +        +IV
Sbjct: 249 AGRDSAGGQAERGAVLEKLAAVLSESPEGQAGLEDLSRISTALAGLGVSEAEAIFDPSIV 308

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGLEYYTG V+EA L     +EK   V FGSVGGGGRYD LV+RF G+ VPATGFS G+S
Sbjct: 309 RGLEYYTGPVFEAELLMETRDEKGNLVRFGSVGGGGRYDDLVARFTGERVPATGFSFGVS 368

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL  AL   E             I  +      + +Y      +R AG+  E++LG S  
Sbjct: 369 RLASALALAEEGAIQPVRGP---IVIIAFSESDMGEYFRLAADIRAAGLAVEVYLGRSG- 424

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+KYADRR  P  ++ G  E +   + IKDL +G+ L+ +I +N+ WREAR  Q+T+
Sbjct: 425 MKAQMKYADRRLSPAVVMLGGDELANNTVTIKDLDQGRLLATQITDNKEWREARPGQVTL 484

Query: 477 PISELVSTVKKI 488
           P +E +  +K I
Sbjct: 485 PRTEAIKHMKSI 496


>gi|149177824|ref|ZP_01856423.1| histidyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148843314|gb|EDL57678.1| histidyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 466

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 148/491 (30%), Positives = 244/491 (49%), Gaps = 55/491 (11%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLP 61
           KK  +     +GF D     +  R +++++ +++Y +YGF PI+TP LEY++ L GK   
Sbjct: 28  KKDLIEPRTLKGFRDYLPSAMIPREQLIETAKSVYRSYGFSPIDTPALEYTEILTGKGGT 87

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           + D   K +F  +   G+ +++R+DLT P AR+ A+N   +  P + Y +G V+R E+  
Sbjct: 88  ESD---KQMFRFE-QGGRDVAMRFDLTVPFARFAAQNIGELGTPFKRYHVGTVWRGERPQ 143

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F+QCD D +G+++ +AD E   ++ D +  +G    D+ I INNRKIL+G+LE 
Sbjct: 144 KGRYREFVQCDFDTIGTTSNSADIETLFIIHDLMVKIGFS--DFTIHINNRKILNGLLES 201

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +     D  +    VLRA+DKL K G   V   + E             +LT +Q + ++
Sbjct: 202 L-----DLQSRSAEVLRALDKLPKIGADAVIKEMQEQG-----------DLTQQQAEKVI 245

Query: 242 SFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           S  +++    + ++ L + + G   GE+G   L  + + V K+G  S RI +  +I RGL
Sbjct: 246 SLTTVEGSTAEILNSLEKQLVGNECGEQGVAYLREVFDAVDKAGIVSERIVLDPSIARGL 305

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG +YE  L         +    GSV  GGRYD L   F  Q +P  G S+G+ RL+
Sbjct: 306 DYYTGTIYETFLN--------QLPGIGSVCSGGRYDNLAELFTTQQLPGVGASLGLDRLL 357

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            A++ L       +   P  I     D+     Y    + LR  G   E++  + K    
Sbjct: 358 AAMQELNLLD---EISTPAPILVTQMDAKYTPDYLRIARDLRMYGFNVEVYPDT-KAIKK 413

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           Q KYA+R    + I+ G  E  +   Q+KD+  G + +                  +   
Sbjct: 414 QFKYANRHGFKIVIVAGDDEFEKQEWQVKDMQTGTQTA------------------VRKE 455

Query: 480 ELVSTVKKILQ 490
           EL+  +++IL 
Sbjct: 456 ELLEHIRRILA 466


>gi|71083184|ref|YP_265903.1| histidyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|83305873|sp|Q4FND9|SYH_PELUB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71062297|gb|AAZ21300.1| Histidyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 465

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 187/493 (37%), Positives = 283/493 (57%), Gaps = 32/493 (6%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+ KL   LP GF D   K++ ++ +++++I   +  +GF  +ETP  E S+++G FL
Sbjct: 1   MNKENKLIPGLPSGFEDRWGKKLILKKKLINTIEANFVKFGFGALETPSFEISENIGSFL 60

Query: 61  PDED-RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            D+D  P   VFS +D   + I+LRYDL++PLAR+VA+N   +  P + Y++G V+RNEK
Sbjct: 61  ADDDSNPMSDVFSFKD-GEKNITLRYDLSSPLARFVAQNNQELPLPYKRYQMGDVWRNEK 119

Query: 120 HGPGRFRQFIQCDVDNVGSSAE-TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
            G  R+R F+QCD D VG+     A+AE+C ++A TL A G+K++ + + I+NRKI+ G+
Sbjct: 120 AGNARYRSFLQCDADIVGNVNPAQANAELCNLIASTLLACGLKKDQFVVNISNRKIVQGL 179

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDK--FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           +E + +  D K+     V+RAIDKLDK  FGL+GV+ LL E R D SG  TKGANLT +Q
Sbjct: 180 IEDLKISDDKKI----KVMRAIDKLDKPGFGLRGVEDLLKEERVDASGAVTKGANLTDDQ 235

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +++FL +   K + E  +        ++G  EL  + E+V   G   ++IK + TIV
Sbjct: 236 ASQIINFLKVKDLKELKENLK----NPLSQEGIKELEDLLEIVS-YGDYLDQIKTNFTIV 290

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL YY G   E  L F   N K K V  GS+  GG+Y+ L+SRFKG ++P TG S G+ 
Sbjct: 291 RGLAYYDGFCVETNLNFKAKNSKGKEVDIGSICSGGQYNKLISRFKGVDIPGTGMSFGVD 350

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ A+  L+    + K+     +     D   L  Y    ++LR   I +E+FL S KN
Sbjct: 351 RLLFAMMQLDQIEVDEKKP----VIICVMDEKYLKNYYEILKVLRDNNINSEIFLDSKKN 406

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            G QL YA+++ CP+A+I G  E     + +K+L                 +    Q+T 
Sbjct: 407 LGKQLTYANKKQCPVAVICGENEFKDNTITLKNL--------------LGVKGENNQLTF 452

Query: 477 PISELVSTVKKIL 489
           P   L++ +KK +
Sbjct: 453 PKENLINEIKKFI 465


>gi|91762386|ref|ZP_01264351.1| histidyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718188|gb|EAS84838.1| histidyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 465

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 188/493 (38%), Positives = 284/493 (57%), Gaps = 32/493 (6%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+ KL   LP GF D   K++ ++ +++++I   +  +GF  +ETP  E S+++G FL
Sbjct: 1   MNKENKLIPGLPSGFEDRWGKKLILKKKLINTIEANFVKFGFGALETPSFEISENIGSFL 60

Query: 61  PDED-RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            D+D  P   VFS +D   + I+LRYDL++PLAR+VA+N   +  P + Y++G V+RNEK
Sbjct: 61  ADDDSNPMSDVFSFKD-GEKNITLRYDLSSPLARFVAQNNQELPLPYKRYQMGDVWRNEK 119

Query: 120 HGPGRFRQFIQCDVDNVGSSAE-TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
            G  R+R F+QCD D VG+     A+AE+C ++A TL A G+K++ + I I+NRKI+ G+
Sbjct: 120 AGNARYRSFLQCDADIVGNVNPAQANAELCNLIASTLLACGLKKDQFVINISNRKIVQGL 179

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDK--FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           +E++ +  D K+     V+RAIDKLDK  FGL+GV+ LL E R D SG  TKGANLT +Q
Sbjct: 180 IEELKISDDKKI----KVMRAIDKLDKPGFGLRGVEDLLKEERVDVSGAVTKGANLTDDQ 235

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +++FL +   K + E  +        ++G  EL  +  +V   G   ++IK + TIV
Sbjct: 236 ASQIINFLKVKDLKELKENLK----NPLSQEGIKELEELLGIVS-YGDYLDQIKTNFTIV 290

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL YY G   E  L F   N K K V  GS+  GG+Y+ L+SRFKG ++P TG SIG+ 
Sbjct: 291 RGLAYYDGFCVETNLKFKTTNNKGKEVDIGSICSGGQYNKLISRFKGVDIPGTGMSIGVD 350

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ A+  L+    + K+     +     D   L  Y    ++LR   I +E+FL S KN
Sbjct: 351 RLLFAMMQLDQIEVDEKKP----VIICVMDEKYLKNYYEILKVLRDNNINSEIFLDSKKN 406

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            G QL YA+++ CP+A+I G  E     + +K+L                 +    Q+T 
Sbjct: 407 LGKQLTYANKKQCPIAVICGENEFKDNTITLKNL--------------LGVKGENNQLTF 452

Query: 477 PISELVSTVKKIL 489
           P   L++ +KK +
Sbjct: 453 PKENLINEIKKFI 465


>gi|87310482|ref|ZP_01092611.1| histidyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87286703|gb|EAQ78608.1| histidyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 449

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 152/475 (32%), Positives = 241/475 (50%), Gaps = 31/475 (6%)

Query: 1   MGKKTK-LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M +KTK ++    +GF D   + +  R R++D+ + +Y +YGF PI+TP LEY++ L   
Sbjct: 1   MSEKTKLIQPRTLKGFRDYLPEAMMPRERLIDAAKQVYRSYGFAPIDTPALEYAEVL--S 58

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
               D  ++ ++  QD  G+ + LR+DLT PLAR+ A++  T+  P + Y +  V+R E 
Sbjct: 59  GKGSDETDRQMYRFQDHGGRDVGLRFDLTVPLARFAAQHVGTLGTPFKRYHVASVWRGEN 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F+QCD D +G+ +  +D E  +++ D + A+G +     +  NNRK+L G+L
Sbjct: 119 TQRGRYREFMQCDFDTIGTKSLVSDIETALVIHDLMRAIGFEGFQMRV--NNRKVLSGVL 176

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           EK+ L           VLRA+DKL K G + V   +       +    +   L       
Sbjct: 177 EKLDLAEKS-----TEVLRALDKLTKIGREKVAAEMIAAAGATAEQADQVLKLAE----- 226

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
               +S    + + +L  LV G+  GE G ++L  + +     G    R+ I  +I RGL
Sbjct: 227 ----VSGSNAEILKQLEPLVAGSETGETGLSQLRDLLDATSAVGVTDARLAIDVSIARGL 282

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG ++E  L              GSV  GGRYD L S +  + +P  G S+G+ RL+
Sbjct: 283 DYYTGAIFETFL--------DDLPGIGSVCSGGRYDNLASLYTKEQLPGVGASLGLDRLL 334

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            A++ L       K   P  +     D  SL+ Y +    LR AGI  E++   +K  G 
Sbjct: 335 AAMEELGLIE---KVSTPAPVFIPYFDEQSLNAYLVLASQLRAAGIGVEIYP-EAKKLGQ 390

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           QLKYADRR   +AII G  E + G  Q+K+LA G+     + +  +    R+ +I
Sbjct: 391 QLKYADRRGFKIAIIAGDRELAEGKCQVKNLAAGEATDESLADGAAAVITRIKEI 445


>gi|147677383|ref|YP_001211598.1| histidyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189082303|sp|A5D3E2|SYH_PELTS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|146273480|dbj|BAF59229.1| histidyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 425

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 102/471 (21%), Positives = 183/471 (38%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D    E+     I    R I   YG+  I TP+ E+++   + + D  D 
Sbjct: 1   MLTTRPRGTNDILPGEVEKWQYIESQFRRICREYGYGEIRTPVFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TAP  R   EN       P + +  GP+FR ++   GR
Sbjct: 61  VEKEMYTFTDRGGRSITLRPENTAPAVRAYLENRLYAGPQPVKLFYAGPMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKIG 183
           FRQF Q  V+  GS     DAE+  M  D    +G+K  + HI      +   +L  ++ 
Sbjct: 121 FRQFHQLGVEVFGSHDPAVDAEVMAMAMDFYGRLGLKNLELHINSVGCPVCRPLLRRRLQ 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +    L       R+     +F    +++L  +                       +  
Sbjct: 181 DYFRPHLERLCKNCRS-----RFDKNPLRVLDCKE---------AACAEIGADAPFAIDC 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L     +   ++ + ++                         +    ++  +VRGL+YYT
Sbjct: 227 LCESCLEHFEKVKKYLE-----------------------LLNVSYTVNRRLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E                  S+GGGGRY+GLV    G   P  G+++G+ R+I+AL+
Sbjct: 264 HTAFEVTARD--------IGAQSSIGGGGRYNGLVEVCGGPPTPGVGYALGLERIILALR 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +         + +       LR+AGI A+      ++   Q+KY
Sbjct: 316 QQGIGL---PGESGPEVFLATAGQAVMPEAFGLLFRLRSAGISADKDY-LDRSLKAQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           A +     A+I G  E  +G + ++D+A G++ + ++     +   ++   
Sbjct: 372 AGKIGARYAVIIGESELKQGTVLVRDMAAGEQSAVKLDGVLQYLREKITGR 422


>gi|225181104|ref|ZP_03734551.1| histidyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168301|gb|EEG77105.1| histidyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 416

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 101/462 (21%), Positives = 192/462 (41%), Gaps = 52/462 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           + PRG  D    EI+   ++      I   +G++ I TP+ E+++   + + D  D  +K
Sbjct: 2   QAPRGTNDILPDEIKTWRQLEHKAVEICHRFGYEEIRTPIFEHTELFLRGVGDVTDIVSK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            +++ +D   + ++LR + TAP+AR   E N   I  P + + IGP+FR ++ G GR+RQ
Sbjct: 62  EMYTFKDRSERSLTLRPEGTAPVARAYMESNLKGIPQPVKLFYIGPMFRYDRPGAGRYRQ 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLHG 186
           F Q  V+  G++A   DAE+ ++  D   ++G+     H+               +    
Sbjct: 122 FYQFGVEVFGTNAPAIDAEVIVLALDFFRSLGLSDFALHLNSVGCPDCRQEYRSALQNEL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            D     ++     D  ++F    +++L  + + D   + TK           ++ +L  
Sbjct: 182 KD-----IVSTLCSDCSERFDKNPMRIL--DCKIDKCKEATKNL-------PSILDYLCS 227

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D      ++  L+                               I+  +VRGL+YYT   
Sbjct: 228 DCSAHFEQVKLLL-----------------------NKLGEEYVINPRLVRGLDYYTKTA 264

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I       +         +GGGGRYD LVS   G + P  GF++GI R+++A+K  +
Sbjct: 265 FEIISTVGDTEQA--------IGGGGRYDNLVSTIGGPDTPGIGFAVGIERVLLAIKESD 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +       +    +      +    +       LR AG   +M     K+   Q K A++
Sbjct: 317 AYPIKGPTLD---VFVAKAGNVPDYEVMPIIMDLRNAGFSVDMDY-MGKSLKAQFKTANK 372

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    ++ G  E     + ++++  G + +  +K      E
Sbjct: 373 KDARYVVVLGEEEMQSKEVTLRNMTTGSQETVGLKQLAERLE 414


>gi|312110102|ref|YP_003988418.1| histidyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215203|gb|ADP73807.1| histidyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 423

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 102/469 (21%), Positives = 186/469 (39%), Gaps = 49/469 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    E      +    R+I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MAFQIPRGTQDILPGETEKWQYVEKIARDICRRYNYREIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ I+LR + TAP+ R   EN        P + Y IGP+FR E+   G
Sbjct: 61  VQKEMYTFEDRGGRSITLRPEGTAPVVRSFVENKMYGDPNQPIKLYYIGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           RFRQF+Q  V+ +GS     DAE+  M  +  +++G+K+    I             +  
Sbjct: 121 RFRQFVQFGVEALGSDDPAIDAEVIAMAMELYQSLGLKKVRLVINSLGDIESRKAHRQAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +  I     D   +     +++L  +   D+    T            ++ +
Sbjct: 181 IDH----FQNRIHEFCEDCQVRLKKNPLRILDCKKDRDHELMAT---------APSILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ +  +   ++   +       +    L                       VRGL+YY 
Sbjct: 228 LNEESSRYFEKVKSYLAKLGIPFEVDARL-----------------------VRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                ++ GGGRY+GLV    G   P  GF++ I RL+ AL 
Sbjct: 265 HTTFEIMSDAEGF------GAITTLCGGGRYNGLVQEIGGPEAPGIGFALSIERLLAALD 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +   +    + +       +     +  +       LR AGI A+      +    QLK 
Sbjct: 319 AEGVALPVQRGIDC---YVVAIGEKAKEESVQLVHELRKAGIAADKDY-QDRKIKAQLKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ADR N     I G  E ++ ++ IK++  G++    + +   + + R++
Sbjct: 375 ADRLNAKFVAILGEDELAKEVINIKEMGTGEQTEVPLPSVVDYLKERLS 423


>gi|311250313|ref|XP_003124081.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 509

 Score =  279 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 119/475 (25%), Positives = 211/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KHKFVLKTPKGTRDYSPRQMAVREKVFDVIIGCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGLFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPD----TKFRTICSSVDKLDKMSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G  +++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGV-ADKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L  P     ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQPPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +   +E+    ++     + R +Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVVKLRSVTSREEVDVRREDLVEEIKRRTSQ 504


>gi|295399338|ref|ZP_06809320.1| histidyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978804|gb|EFG54400.1| histidyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 423

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 102/469 (21%), Positives = 187/469 (39%), Gaps = 49/469 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    E      +    R+I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MAFQIPRGTQDILPGETEKWQYVEKIARDICRRYNYREIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ I+LR + TAP+ R   EN        P + Y IGP+FR E+   G
Sbjct: 61  VQKEMYTFEDRGGRSITLRPEGTAPVVRSFVENKMYGDPNQPIKLYYIGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           RFRQF+Q  V+ +GS     DAE+  M  +  +++G+K+    I             +  
Sbjct: 121 RFRQFVQFGVEALGSDDPAIDAEVIAMAMELYQSLGLKKVRLVINSLGDIESRKAHRQAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +  I     D   +     +++L  +   D+    T            ++ +
Sbjct: 181 IDH----FQNRIHEFCEDCQVRLKKNPLRILDCKKDRDHELMAT---------APSILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ +  +   ++   ++      +    L                       VRGL+YY 
Sbjct: 228 LNEESSRYFEKVKAYLEKLGIPFEVDARL-----------------------VRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                ++ GGGRY+GLV    G   P  GF++ I RL+ AL 
Sbjct: 265 HTTFEIMSDAEGF------GAITTLCGGGRYNGLVQEIGGPEAPGIGFALSIERLLAALD 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +   +    + +       +     +  +       LR AGI A+      +    QLK 
Sbjct: 319 AEGVALPVQRGIDC---YVVAIGEKAKEESVQLVHELRKAGIAADKDY-QDRKIKAQLKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ADR N     I G  E ++ ++ IK++  G++    + +   + + R++
Sbjct: 375 ADRLNAKFVAILGEDELAKEVINIKEMGTGEQTEVPLPSVVDYLKERLS 423


>gi|312877307|ref|ZP_07737274.1| histidyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795940|gb|EFR12302.1| histidyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 421

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 100/469 (21%), Positives = 191/469 (40%), Gaps = 52/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E  +   + +  R I + YG+  +  P  EY++   + + +  D 
Sbjct: 1   MKIQAPKGTKDVLPEESYMWQYVENKFREICKLYGYQEVRFPTFEYTELFQRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TA  AR   E+   +   P R Y I   FR E    GR
Sbjct: 61  VQKEMYTFLDKGGRSITLRPEGTASTARLFIEHGFASRPMPQRFYYIISAFRYENTQGGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           FR+F Q  ++N GSS+   DAE+  +  +   ++G+         I         ++ + 
Sbjct: 121 FREFHQFGIENFGSSSPVTDAEVISLAYNFFTSIGLDNITVNINSIGCPACRKEYVKNLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +      +            +     +++L  +          +G  L ++     + +
Sbjct: 181 EYFSANSQKLCHTCH-----QRLDKNPMRILDCKE---------EGCKLIAKDAPKPIDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +     +   +   +                          K+   IVRGL+YYT
Sbjct: 227 LCDDCKSHFESVKTYLDSAMVV-----------------------YKVDPFIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +      +          + GGGRYD L+ +  G ++P  GF+IG+ RL++ L+
Sbjct: 264 KTVFEIVAPVSDKDLA--------ICGGGRYDNLIEQIGGNSIPGIGFAIGVERLLMLLE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +       +SL +     +MLR  GI   +     ++  +Q+KY
Sbjct: 316 QNGLLP---ARPQVPQVFVATVGENSLKEAFEIARMLRFEGISTIIE-EMGRSLKSQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           AD+  C  +II G  E ++G+ +I+++    E   EI+N   + + ++ 
Sbjct: 372 ADKIGCQFSIIIGDDEIAKGVCKIRNMRTSSEGIVEIENVCQYLKEKLQ 420


>gi|312794171|ref|YP_004027094.1| histidyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181311|gb|ADQ41481.1| histidyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 421

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 100/469 (21%), Positives = 191/469 (40%), Gaps = 52/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E  +   + +  R I + YG+  +  P  EY++   + + +  D 
Sbjct: 1   MKIQAPKGTKDVLPEESYMWQYVENKFREICKLYGYQEVRFPTFEYTELFQRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TA  AR   E+   +   P R Y I   FR E    GR
Sbjct: 61  VQKEMYTFLDKGGRSITLRPEGTASTARLFIEHGFASRPMPQRFYYIISAFRYENTQGGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           FR+F Q  ++N GSS+   DAE+  +  +   ++G+         I         ++ + 
Sbjct: 121 FREFHQFGIENFGSSSPVTDAEVISLAYNFFTSIGLDNITVNINSIGCPVCRKEYVKNLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +      +            +     +++L  +          +G  L ++     + +
Sbjct: 181 EYFSANSQKLCHTCH-----QRLDKNPMRILDCKE---------EGCKLIAKDAPKPIDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +     +   +   +                          K+   IVRGL+YYT
Sbjct: 227 LCDDCKSHFESVKTYLDSAMVV-----------------------YKVDPFIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +      +          + GGGRYD L+ +  G ++P  GF+IG+ RL++ L+
Sbjct: 264 KTVFEIVAPVSDKDLA--------ICGGGRYDNLIEQIGGNSIPGIGFAIGVERLLMLLE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +       +SL +     +MLR  GI   +     ++  +Q+KY
Sbjct: 316 QNGLLP---ARPQVPQVFVATVGENSLKEAFEIARMLRFEGISTIIE-EMGRSLKSQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           AD+  C  +II G  E ++G+ +I+++    E   EI+N   + + ++ 
Sbjct: 372 ADKIGCQFSIIIGDDEIAKGVCKIRNMRTSSEGIVEIENVCQYLKEKLQ 420


>gi|304316701|ref|YP_003851846.1| histidyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778203|gb|ADL68762.1| histidyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 417

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/460 (22%), Positives = 191/460 (41%), Gaps = 52/460 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E+   + + + IR I +N+GF  I TP  E+++   + + +  D 
Sbjct: 1   MLTKAPRGTKDVLPSEVYKWHYVENIIREICDNFGFKEIRTPGFEHTELFLRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+L+ + T+P  R   E+       P + Y I PV+R E+   GR
Sbjct: 61  VRKEMYTFNDKGGRSITLKPEGTSPAVRAFVEHNLYAEAMPVKLYYITPVYRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
            R+  Q  ++  G+   +ADAE+  +     + +G+   +     I          + + 
Sbjct: 121 LREHHQFGIEMFGAHDASADAEVISVAMTLFKRLGLNNLELNINSIGCPNCRREYNKALK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               + + +        D  +++ +  +++L  +          +      +   +M+++
Sbjct: 181 EFLGENIEKL-----CDDCKERYKINPMRVLDCK---------VESCKRILKDAPLMLNY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D ++    L   +K                              I+  IVRGL+YYT
Sbjct: 227 LCDDCKEHFENLQSYLKEA-----------------------GFNFVINPKIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E I               G+V GGGRYDGLV    G ++P  GF +GI RL++ L+
Sbjct: 264 KTAFEIISND--------IGAQGTVCGGGRYDGLVEECGGPSIPGVGFGMGIERLLLTLE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +        K     + T      D+          LR +G+  E+     ++   Q+KY
Sbjct: 316 NSGIEIPLPKRTDLFICTV---GDDAKKYAFSMALRLRNSGLSVEVD-NMGRSLKAQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           A++ N    II G  E    ++++K++  G+E+  +I N 
Sbjct: 372 ANKLNVRYTIILGEDELKNKVVRLKNMDNGEEIEIDIDNV 411


>gi|56421108|ref|YP_148426.1| histidyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81675744|sp|Q5KWS8|SYH_GEOKA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|56380950|dbj|BAD76858.1| histidyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 426

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 103/473 (21%), Positives = 189/473 (39%), Gaps = 51/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    +      +    R++   YG+  I TP+ E+++   + + D  D 
Sbjct: 1   MAFQIPRGTQDVLPGDSEKWQYVEHIARSLCSRYGYQEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TAP+ R   E+        P + Y  GP+FR E+   G
Sbjct: 61  VQKEMYTFEDKGGRALTLRPEGTAPVVRAFVEHKLYGSPNQPLKLYYSGPMFRYERPEAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           RFRQF+Q  V+ +GSS    DAE+  +     EA+G+KR    I    +        E +
Sbjct: 121 RFRQFVQFGVEALGSSDPAIDAEVMALAMHIYEALGLKRIRLVINSLGDLDSRRAHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H  ++++E        D   +     +++L  +   D+    T            ++ 
Sbjct: 181 VRHFSNRIHEL-----CPDCQTRLHTNPLRILDCKKDRDHELMAT---------APSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++ + +                               I + +VRGL+YY
Sbjct: 227 YLNDESRAYFEKVKQYLTAL-----------------------GIPFVIDARLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E       M+E +      ++ GGGRY+GLV    G   P  GF++ I RL+ AL
Sbjct: 264 NHTTFEI------MSEAEGFGAAATLCGGGRYNGLVQEIGGPETPGIGFALSIERLLAAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +          +   ++        +  +       LR +G+R +      +    QLK
Sbjct: 318 DAEGVELPVESGLDCYVVAV---GERAKDEAVRLVYALRRSGLRVDQDY-LGRKLKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            ADR       I G  E  R    +K +A G++ +  +     +   R+ +  
Sbjct: 374 AADRLGASFVAIIGDEELERQEAAVKHMASGEQTNVPLGELAHFLHERIGKEE 426


>gi|212638574|ref|YP_002315094.1| histidyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226737064|sp|B7GFR0|SYH_ANOFW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|212560054|gb|ACJ33109.1| Histidyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 423

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 101/465 (21%), Positives = 183/465 (39%), Gaps = 49/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D   ++      I    R +   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSFQIPRGTQDILPEQAAKWQYIEHIARELCRRYNYQEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA + R   EN        P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFEDRGGRSLTLRPEGTAAVVRSFVENKMYGDPNQPVKLYYMGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           RFRQF+Q  V+ +GS+    DAE+  +  D    +G+K+    I             +  
Sbjct: 121 RFRQFVQFGVEALGSNDPAIDAEVIALAMDIYRMLGLKKLKLVINSLGDVESRKAHRQAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +  I     D   +     +++L  +   D+    T            ++ +
Sbjct: 181 IDH----FQPRIHEFCDDCQARLHKNPMRILDCKKDRDHELMRT---------APSILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+        ++   ++      +  + L                       VRGL+YY 
Sbjct: 228 LNEQSRTYFEKVQMYLQKLGIAFEVDSRL-----------------------VRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E       M+E +      ++ GGGRY+GLV    G   P  GF++ I RL+ AL+
Sbjct: 265 HTAFEI------MSEAEGFGAITTLCGGGRYNGLVQEIGGPETPGIGFALSIERLLAALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +   S    + +       +     +  +       LR  GI AE      +    QLK 
Sbjct: 319 AEGISLPISEGIDC---YVVALGEQAKEEAVALVAALRKEGISAEKDY-QDRKVKAQLKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ADR +     I G  E  +G++ +K +A G++    +    S  +
Sbjct: 375 ADRLHATYVAILGEDELQKGVINVKHMATGEQQEVSLHTFISHMK 419


>gi|261418411|ref|YP_003252093.1| histidyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767630|ref|YP_004133131.1| histidyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374868|gb|ACX77611.1| histidyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112496|gb|ADU94988.1| histidyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 426

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/473 (22%), Positives = 188/473 (39%), Gaps = 51/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    +      +    RN+   YG+  I TP+ E+++   + + D  D 
Sbjct: 1   MAFQIPRGTQDVLPGDTEKWQYVEHVARNLCSRYGYREIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TAP+ R   E+        P + Y  GP+FR E+   G
Sbjct: 61  VQKEMYTFEDKGGRALTLRPEGTAPVVRAFVEHKLYGSPHQPLKLYYSGPMFRYERPEAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           RFRQF+Q  V+ +GSS    DAE+  +     EA+G+KR    I    +        E +
Sbjct: 121 RFRQFVQFGVEALGSSDPAIDAEVMALAMHIYEALGLKRIRLVINSLGDLDSRRAHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H   +++E        D   +     +++L  +   D+    T            ++ 
Sbjct: 181 VRHFSSRIHEL-----CPDCQTRLHTNPLRILDCKKDRDHELMAT---------APSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ + +                               I S +VRGL+YY
Sbjct: 227 YLNEDSRAYFEKVKQYLTNL-----------------------GIPFVIDSRLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E       M+E +      ++ GGGRY+GLV    G   P  GF++ I RL+ AL
Sbjct: 264 NHTTFEI------MSEAEGFGAAATLCGGGRYNGLVQEIGGPETPGIGFALSIERLLAAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +          +   ++        +  +       LR +G+R +      +    QLK
Sbjct: 318 DAEGVELPVESGLDCYVVAV---GERAKDEAVRLVYALRRSGLRVDQDY-LGRKLKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            ADR       I G  E  R    +K +A G++ +  +     +   R+ +  
Sbjct: 374 AADRLGASFVAIIGDEELERQEAAVKHMASGEQTNVPLGELAHFLHERIGKEE 426


>gi|297529263|ref|YP_003670538.1| histidyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252515|gb|ADI25961.1| histidyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 426

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 105/473 (22%), Positives = 187/473 (39%), Gaps = 51/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    +      +    R++   YG+  I TP+ E+++   + + D  D 
Sbjct: 1   MAFQIPRGTQDVLPGDTEKWQYVEHIARSLCSRYGYQEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TAP+ R   E+        P + Y  GP+FR E+   G
Sbjct: 61  VQKEMYTFEDKGGRALTLRPEGTAPVVRAFVEHKLYGSPNQPLKLYYSGPMFRYERPEAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           RFRQF+Q  V+ +GSS    DAE+  +     EA+G+KR    I    +        E +
Sbjct: 121 RFRQFVQFGVEALGSSDPAIDAEVMALAMHIYEALGLKRIRLVINSLGDLDSRRAHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H   +++E        D   +     +++L  +   D+    T            ++ 
Sbjct: 181 VRHFSSRIHEL-----CPDCQTRLHTNPLRILDCKKDRDHELMAT---------APSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ + +                               I S +VRGL+YY
Sbjct: 227 YLNEDSRAYFEKVKQYLTNL-----------------------GIPFVIDSRLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E       M+E +      ++ GGGRY+GLV    G   P  GF++ I RL+ AL
Sbjct: 264 NHTTFEI------MSEAEGFGAAATLCGGGRYNGLVQEIGGPETPGIGFALSIERLLAAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +          +   ++        +  +       LR  G+R +      +    QLK
Sbjct: 318 DAEGVELPVESGLDCYVVAV---GERAKDEAVRLVYALRRFGLRVDQDY-LGRKLKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            ADR       I G  E  R    +K +A G++ +  +     +   R+ +  
Sbjct: 374 AADRLGASFVAIIGDEELERQEAAVKHMASGEQTNVPLGELAHFLHERIGKEE 426


>gi|15613814|ref|NP_242117.1| histidyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139937|sp|Q9KDG2|SYH_BACHD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|10173867|dbj|BAB04970.1| histidyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 428

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 98/469 (20%), Positives = 188/469 (40%), Gaps = 49/469 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    ++     I     ++   Y +  I  P+ E+++   + + D  D 
Sbjct: 1   MAIQIPRGTQDILPGDVETWQWIEQKAYDLCRRYNYQEIRVPMFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA + R    N        P + + IGP+FR E+   G
Sbjct: 61  VQKEMYTFEDRGGRSLTLRPEGTASVTRAYVSNKLYGQANQPTKLFYIGPMFRYERPQSG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF+Q  V+ +GS+    DAE+  ++    E +G+K     I             +  
Sbjct: 121 RMRQFVQFGVEALGSADPAIDAEVLALVMRFYEELGLKNLKLVINSLGDTDSRLAHREAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           ++      +  I     D  D+     +++L  +   D+    T            +  +
Sbjct: 181 VNH----FKPRIHEFCNDCQDRLEKNPLRILDCKKDRDHELMGT---------APSIHDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS + +    ++   +                          +    + +T+VRGL+YY 
Sbjct: 228 LSTESKAYFEKVQSYLTAL-----------------------NIPFVVDATLVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E ++               ++ GGGRY+GLV    G   P  GF++ I R I+AL+
Sbjct: 265 HTAFEVMVDGEGF------GAITTLCGGGRYNGLVEEIGGPETPGIGFALSIERAIMALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           + ++   + + +       +     +  K       LR AGI AE      +    QLK 
Sbjct: 319 AQQAKPAHNQAIDC---YVVTLGEAAKDKGVELVYQLRNAGISAEKDY-LDRKMKGQLKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ADR +    +I G  E + G + +K++  G++    + +  S  + +V 
Sbjct: 375 ADRLHAKWTVILGEDELAVGKVNVKNMETGEQTDVALTDLVSHMKQQVE 423


>gi|26353930|dbj|BAC40595.1| unnamed protein product [Mus musculus]
          Length = 509

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 117/475 (24%), Positives = 210/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  ++ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVCG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLILFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GS+  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    ++          +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEASEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+  + ++       R  Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVVKLRSVASREEVDVQREDLVEEIRRRTNQ 504


>gi|220932052|ref|YP_002508960.1| histidyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782333|sp|B8CXE6|SYH_HALOH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|219993362|gb|ACL69965.1| histidyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 419

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 191/468 (40%), Gaps = 58/468 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D           I D+ R I++ Y +  I TP+ EY++   + + +  D 
Sbjct: 1   MDVKAPRGTNDILPPVSLKWQYIEDTARRIFQMYNYKEIRTPIFEYTELFQRGIGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+LR + TA + R   E+     V P + + IGP+FR E+   GR
Sbjct: 61  VEKEMYTFEDKGGRSITLRPEGTASVVRAFLEHKIYGQVQPTKYFYIGPMFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILE 180
           FRQF Q  V+  GS+    DAE+  +  D L+ +G+       +       R      L+
Sbjct: 121 FRQFHQLGVEAFGSNDPALDAEVIALGLDILKRLGLTDVEVFINSIGCPECRARYSDELK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D+L          D   +     +++L  +          +  +L  +    +
Sbjct: 181 QYLESHQDRL--------CKDCKARLNKNPLRILDCKN---------EECSLVIKNAPKI 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L  +      ++ E +                            + ++  T+VRGL+
Sbjct: 224 LDYLCDNCRVHFEDVQEYLD-----------------------LLGIKYRVDPTLVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E                  ++ GGGRY+GL      +++P  GF++GI RLI+
Sbjct: 261 YYTNTAFEIKFKE--------LGAQDAIFGGGRYNGLTEEIGNKSIPGIGFAVGIERLIL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL         +     + +  +     +      YT +LR +GI AE+     ++  +Q
Sbjct: 313 ALDKKGI---KLPVNDSIDVYLVTIGERAKRAAFNYTYLLRESGITAEIDY-LGRSIKSQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +K ADR      II G  E   G   +K++  G+++   + N     +
Sbjct: 369 MKSADRTGASYTIIIGDSELDSGKATVKNMRTGEQVEIMLANLIEEMQ 416


>gi|74214566|dbj|BAE31128.1| unnamed protein product [Mus musculus]
          Length = 509

 Score =  276 bits (706), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 117/475 (24%), Positives = 209/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  ++ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMVPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVCG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLILFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GS+  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    ++          +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEASEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++       R  Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEVDVRREDLVEEIRRRTNQ 504


>gi|299822822|ref|ZP_07054708.1| histidine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816351|gb|EFI83589.1| histidine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 430

 Score =  276 bits (706), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/492 (22%), Positives = 193/492 (39%), Gaps = 67/492 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ +LPRG  D   +E+   + +  S   I  +Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MKIQLPRGTRDILPEEVAKWHFLERSFEEICTDYQYQEIRTPIFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA + R   E+    +   P + Y  GP+FR E+   G
Sbjct: 61  VTKEMYTFEDKGGRSLTLRPEGTASVVRAFVEHKMFGSPNQPNKLYYKGPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF Q  ++ +GS     D E+  ++    + +G+      I     K       +  
Sbjct: 121 RQRQFHQMGIEALGSYDPAIDVEVITLVMHFFQKIGLSNTKLVINSLGDKESRLRHREAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       E  I     D  ++     +++L  +   D+            +    ++ +
Sbjct: 181 IAH----FEPRIDEFCADCQNRLYKNPLRILDCKKDHDHP---------LVQSAPSILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+        ++   +       +                       I  T+VRGL+YY 
Sbjct: 228 LNEASTAYFDKVKSYLDAVGLDCE-----------------------IDPTMVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +        K       ++ GGGRY GLV  F G   P  GF IG+ R+++AL+
Sbjct: 265 HTTFEIMSVEEGFGAK------TTLCGGGRYHGLVQEFDGPETPGIGFGIGVERVLLALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E      K +       +     +  K       LR  GI AE      +    QLK 
Sbjct: 319 KAEVIIPEEKALAC---YVITAGEGTAVKAMSIMNTLRQQGISAEKDY-QDRKLKGQLKD 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           ADR+N    II G  E + G+ ++KD+  G++ +                  I    + +
Sbjct: 375 ADRKNALFTIIVGEEELASGVYKLKDMKSGEQTA------------------IAEDAIAA 416

Query: 484 TVKKILQENKEE 495
           T+ K LQ  KEE
Sbjct: 417 TISKKLQTLKEE 428


>gi|296120299|ref|YP_003628077.1| histidyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296012639|gb|ADG65878.1| histidyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 444

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 155/462 (33%), Positives = 241/462 (52%), Gaps = 40/462 (8%)

Query: 11  LPR---GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRP 66
            PR   GF D     +  R R++++ R +Y +YGF PI+TP+LEYS+  LGK   + D  
Sbjct: 6   TPRVLGGFRDYLPDAMMARERLMETARRVYRSYGFSPIDTPVLEYSEILLGKGGDESD-- 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +F  +D+  + +++R+DLT PLAR+ A +   +  P + Y I PV+R EK   GR+R
Sbjct: 64  -KQLFRFRDNGDRDVAMRFDLTVPLARFSAMHAGELGLPFKRYHIAPVWRGEKPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN---DYHIGINNRKILDGILEKIG 183
           +F+QCD D +G+ +  AD E  M++ D L A+G  +N    + I +NNR IL+G+LE++G
Sbjct: 123 EFVQCDFDTIGTLSNAADIETLMVIYDLLSAIGFTQNGQPQFGIRVNNRLILNGVLEQLG 182

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +         + VLRAIDKL K G + V   + E  +           L+S+Q   ++  
Sbjct: 183 VAEKS-----VGVLRAIDKLPKVGREAVLAEMVEKVS-----------LSSDQAAQVLDL 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS   E  + +L +L+       +G   L  +    +++G  ++ + I  +I RGL+YYT
Sbjct: 227 LS--SEADLDQLEKLLASNAKASEGVARLKELLSAAKEAGIPASAVTIDLSIARGLDYYT 284

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G +YE  L              GSV  GGRYD L   F  + +P  G S+G+ RL+ A++
Sbjct: 285 GTIYETFLTALPT--------IGSVCSGGRYDNLAGLFTKEQLPGIGASLGLDRLLAAME 336

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
            L           P ++     D   L  Y    + LR AGI  E++   +K  G QL+Y
Sbjct: 337 ELG---MIGHATTPAVVFVPQFDESKLGAYMHLARRLRAAGIATEVYP-EAKKLGKQLQY 392

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           ADR+   LA+I G+ E ++G  Q+KDL  G +        E+
Sbjct: 393 ADRKGFRLAVIAGSDEFAKGEWQVKDLQSGSKEMIADAVLET 434


>gi|74211893|dbj|BAE29290.1| unnamed protein product [Mus musculus]
          Length = 509

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 117/475 (24%), Positives = 210/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K +++L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYNLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  ++ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVCG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLILFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GS+  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    ++          +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEASEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++       R  Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEVDVRREDLVEEIRRRTNQ 504


>gi|167629917|ref|YP_001680416.1| histidyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|229558684|sp|B0TF88|SYH_HELMI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|167592657|gb|ABZ84405.1| histidyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 425

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 112/472 (23%), Positives = 186/472 (39%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D    + R    + D+IR +   YG++ I TP+ E+S+   + + D  D 
Sbjct: 1   MLISAPRGTKDILPGQSRHWQTLEDTIRRLCREYGYEEIRTPIFEHSEVFHRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
             K  +  QD  G+ ++LR + TAP  R + E+       P + Y  GP+FR  +    R
Sbjct: 61  VQKETYDFQDRGGRDLTLRPEGTAPTVRALLEHKLYAGSLPVKLYYTGPMFRFGRPQTVR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIG 183
            RQF Q  ++  G+S    DAE+  M  D    +G+K  +  +  I          E + 
Sbjct: 121 LRQFHQFGIEVFGASGPRVDAEVIAMAMDFYSRLGLKNLELLLNSIGCPACRPAYREALH 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                K  E        D   +     +++L  + +     + ++GA  T       V+ 
Sbjct: 181 QFLRPKGGEL-----CEDCKKRMDRNPLRVL--DCKNQRCQELSQGAPTT-------VNH 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D      ++ EL+          + L                       VRGL+YYT
Sbjct: 227 LCDDCANHFADVKELLDAAGVAYSLDDRL-----------------------VRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +         +      S+GGGGRYD LV    G  VP  GF +G+ R+++ +K
Sbjct: 264 KTAFEIV--------SRDIGAQSSIGGGGRYDHLVEALGGPPVPGIGFGLGLERVLLTMK 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +      + +E   + I        +        Q LR  G+  EM     ++   Q+K 
Sbjct: 316 NQGLLDADSREQRDLFIALAGEG--TQPVAFGLAQKLRQRGVAVEMDYLE-RSLKAQMKT 372

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           ADR   P  +I G GE   G L ++ +A G++    +     + +   A   
Sbjct: 373 ADRFRVPYVVIVGEGELKEGKLTLRTMATGEQQQIPLGEAAEYLDNLFANRE 424


>gi|229543723|ref|ZP_04432783.1| histidyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328143|gb|EEN93818.1| histidyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 427

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 102/458 (22%), Positives = 179/458 (39%), Gaps = 49/458 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    E+   N I ++ + I ENY +  I TP+ EY++   K + D  D 
Sbjct: 1   MTVQIPRGTQDILPGEVEKWNYIENTAKKICENYQYREIRTPIFEYTELFQKGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++  D  G+ ++LR + TAP+ R    +      V P + Y  GP+FR E+   G
Sbjct: 61  VQKEMYTFDDRGGRSLTLRPEGTAPVVRSFIGHKMFGNTVQPVKLYYNGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           RFRQF+Q  V+ +GS     DAE+  +  D  + +G+K     I     K       +  
Sbjct: 121 RFRQFVQFGVEALGSEDPAIDAEVIALAMDIYKQLGLKNVKLVINSLGDKESRLRHREAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +  I     D   +     +++L  +   D+    T            ++ +
Sbjct: 181 IDH----FKPHIGEFCADCQKRLEQNPLRILDCKKDHDHPLMKT---------APSILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+   +    ++ + +                       G      +I   +VRGL+YY 
Sbjct: 228 LNDASKAYFDKVLQFL-----------------------GTLGIPYEIDPGLVRGLDYYV 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                ++ GGGRY+GLV    G   P  GF++ I RL+ AL 
Sbjct: 265 HTCFEIMSNAEGF------GAITTLCGGGRYNGLVEEMGGPETPGIGFALSIERLLAALD 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +                  +    ++        Q LR+AG  A+      +    Q K 
Sbjct: 319 AEGIELPVGHRTDC---YVVAIGEETKPAAFKLLQALRSAGFSADQDY-LGRKVKAQFKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ADR       + G  E   G   ++++A G++    ++
Sbjct: 375 ADRVKAAFVAVIGEEELRAGKASVRNMATGEQKELPLE 412


>gi|251823891|ref|NP_032240.3| histidyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|74147283|dbj|BAE27533.1| unnamed protein product [Mus musculus]
 gi|74184854|dbj|BAE39050.1| unnamed protein product [Mus musculus]
 gi|74184967|dbj|BAE39097.1| unnamed protein product [Mus musculus]
          Length = 509

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 117/475 (24%), Positives = 209/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  ++ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVCG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLILFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GS+  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    ++          +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEASEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++       R  Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEVDVRREDLVEEIRRRTNQ 504


>gi|114051578|ref|NP_001039531.1| histidyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|110287977|sp|Q2KI84|SYHC_BOVIN RecName: Full=Histidyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|86826556|gb|AAI12732.1| Histidyl-tRNA synthetase [Bos taurus]
 gi|296485285|gb|DAA27400.1| histidyl-tRNA synthetase [Bos taurus]
          Length = 509

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 120/475 (25%), Positives = 213/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I + ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KPKFVLKTPKGTRDYSPRQMAVREKVFDVIISCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMLPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G  +++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L  P     ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQPPARAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLISELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++     + R +Q
Sbjct: 450 NQLQYCEETGIPLVAIIGEQELKDGVIKLRSVASREEVDVRREDLVEEIKRRTSQ 504


>gi|18044873|gb|AAH20088.1| Hars protein [Mus musculus]
          Length = 509

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 117/475 (24%), Positives = 209/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  ++ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVCG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLILFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GS+  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    ++          +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEASEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++       R  Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEVDVRREDLVEEIRRRTNQ 504


>gi|301753575|ref|XP_002912606.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
 gi|281345421|gb|EFB21005.1| hypothetical protein PANDA_000362 [Ailuropoda melanoleuca]
          Length = 509

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 120/475 (25%), Positives = 213/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I + ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIVSCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAVCG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G  S++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPELSQNKQALEGLGDLKLLFEYLTLFGI-SDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L    +   ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQTPVRAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++     + R +Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEVDVRREDLVEEIKRRTSQ 504


>gi|70794762|ref|NP_001020585.1| histidyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|67678042|gb|AAH97969.1| Histidyl-tRNA synthetase [Rattus norvegicus]
 gi|149017268|gb|EDL76319.1| dead end homolog 1 (zebrafish) [Rattus norvegicus]
          Length = 508

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 116/475 (24%), Positives = 209/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  ++ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSSLQIGNFQVKVNDRRILDGMFAVCG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GS+  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    ++          +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQKLEASEEKVRTTETQVLVASAQKKLLEERLKLISELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +   +E+    ++       R +Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIRRRTSQ 504


>gi|291387471|ref|XP_002710301.1| PREDICTED: histidyl-tRNA synthetase-like [Oryctolagus cuniculus]
          Length = 509

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 119/475 (25%), Positives = 208/475 (43%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KHKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G N ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQAMEGLGDLKLLFEYLTLFGVN-DKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L         +P   GSV  GGRYDGL  +   +G+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQTPAQAGDEPSGVGSVAAGGRYDGLVGMFDPRGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++     + R  Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEVDVRREDLVEEIKRRTDQ 504


>gi|332234658|ref|XP_003266523.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic isoform 3
           [Nomascus leucogenys]
          Length = 480

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 118/475 (24%), Positives = 210/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I + ++ +G + I+TP+ E  ++L     ++
Sbjct: 22  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIHCFKRHGAEVIDTPVFELKETLTGKYGED 81

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 82  ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 137

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+       +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 138 RYREFYQCDFDIAGNFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 196

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 197 VSDS----KFRTICSSVDKLDKMSWEEVK-----------NEMVGEKGLAPEVADRIGDY 241

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 242 VQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGLD 300

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 301 YYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 360

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 361 FSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 420

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 421 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 475


>gi|73949318|ref|XP_535213.2| PREDICTED: similar to Histidyl-tRNA synthetase (Histidine--tRNA
           ligase) (HisRS) isoform 1 [Canis familiaris]
          Length = 509

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 121/475 (25%), Positives = 216/475 (45%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I + ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIISCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G          C+ +   +    ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFDPMIPDAECLEIMCEILR-SLQIGDFLVKVNDRRILDGMFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADHIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G  +++I    ++ RGL+
Sbjct: 271 VQQHGGISLVEQLLQDPELSQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L    +   ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQTPVQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +T          +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEATEEKVRTTETQVLVASAQKKLLEERLKLVSELWNAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++     + R +Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEVDVPREDLVEEIKRRTSQ 504


>gi|2501005|sp|Q61035|SYHC_MOUSE RecName: Full=Histidyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|1209683|gb|AAC52914.1| histidyl-tRNA synthetase [Mus musculus]
 gi|148664763|gb|EDK97179.1| histidyl-tRNA synthetase [Mus musculus]
          Length = 509

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 117/475 (24%), Positives = 210/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  ++ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVCG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLILFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GS+  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    ++          +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEASEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+  + ++       R  Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEVDVQREDLVEEIRRRTNQ 504


>gi|312623087|ref|YP_004024700.1| histidyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203554|gb|ADQ46881.1| histidyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 421

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 98/469 (20%), Positives = 186/469 (39%), Gaps = 52/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E  +   + +  R I + YG+  +  P  EY++   + + D  D 
Sbjct: 1   MKIQAPKGTKDVLPEESYMWQYVENKFREICKLYGYQEVRFPTFEYTELFQRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TA  AR   E+   +   P R Y I   FR E    GR
Sbjct: 61  VQKEMYTFLDKGGRSITLRPEGTASTARLFIEHGFASRPMPQRFYYIISAFRYENTQGGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           FR+F Q  ++N GSS+   DAE+  +  +   ++G+         I         ++ + 
Sbjct: 121 FREFHQFGIENFGSSSPVTDAEVISLAYNFFASLGLDNITVNINSIGCPVCRKEYVKNLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +      +            +     +++L  +          +   L ++     + +
Sbjct: 181 EYFSANSQKLCHTCH-----QRLDKNPMRILDCKE---------EDCKLIAKDAPKPIDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +     +   +   +                          K+   IVRGL+YYT
Sbjct: 227 LCDDCKSHFESVKTYLDSAMV-----------------------SYKVDPYIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +                 + GGGRYD L+ +  G + P  GF+IG+ RL++ L+
Sbjct: 264 KTVFEIVATVSDKELA--------ICGGGRYDNLIEQIGGNSTPGIGFAIGVERLLMLLE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +       + + K     +MLR  GI   +     ++  +Q+KY
Sbjct: 316 QNGLLP---ARSQVPRVFVATIGENGIKKAFEIARMLRFEGISTVVE-EMGRSLKSQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           AD+  C  +II G  E  +G+ +++++    E   EI+N   + + ++ 
Sbjct: 372 ADKIGCEFSIIIGDDEIEKGVCKVRNMKTSSEEIVEIENICEYLKEKLQ 420


>gi|332234654|ref|XP_003266521.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic isoform 1
           [Nomascus leucogenys]
 gi|332234656|ref|XP_003266522.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic isoform 2
           [Nomascus leucogenys]
          Length = 509

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 118/475 (24%), Positives = 210/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I + ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIHCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+       +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGNFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VSDS----KFRTICSSVDKLDKMSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 504


>gi|239827844|ref|YP_002950468.1| histidyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511950|sp|C5D510|SYH_GEOSW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|239808137|gb|ACS25202.1| histidyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 423

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/469 (21%), Positives = 190/469 (40%), Gaps = 49/469 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    E+     +    R+I + Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MAFQIPRGTQDILPGEVEKWQYVEKIARDICKRYNYHEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TAP+ R   EN        P + Y IGP+FR E+   G
Sbjct: 61  VQKEMYTFEDRAGRSMTLRPEGTAPVVRSFVENKMYGNPNQPIKLYYIGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           RFRQF+Q  V+ +GS+    DAE+  M  +   ++G+K+    I             +  
Sbjct: 121 RFRQFVQFGVEAIGSNDPAIDAEVIAMAMELYRSLGLKKLRLVINSLGDVETRKAHRQAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +  I     D   +     +++L  +   D+    T            ++ +
Sbjct: 181 IDH----FKSRIHELCEDCQVRLEKNPLRILDCKKDRDHELMAT---------APSILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ +      ++   +       +    L                       VRGL+YY 
Sbjct: 228 LNDESRHYFEKVKAYLTKLGIPFEVDPRL-----------------------VRGLDYYH 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                ++ GGGRY GLV    G   P  GF++ I RL+ AL+
Sbjct: 265 HTTFEIMSDAEGF------GAITTLCGGGRYSGLVQEIGGPETPGIGFALSIERLLAALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +   +    + +   ++        +  +  +    LR AGI A+      +    QLK 
Sbjct: 319 AEGITLPISEGIDCYVVAV---GEKAKDESILLVHKLRKAGIVADKDY-QDRKIKAQLKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ADR N     I G  E ++ ++ IK+++ G++    + +   + + R++
Sbjct: 375 ADRLNAKFVAILGDDELAKEVINIKEMSTGEQTEVPLHSVVDYLKERLS 423


>gi|325108678|ref|YP_004269746.1| histidyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968946|gb|ADY59724.1| histidyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 441

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 143/467 (30%), Positives = 240/467 (51%), Gaps = 36/467 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++ +  RGF D   +++  R  ++   R++Y +YGF PI+TP LEY++  LGK   + D 
Sbjct: 5   IKPQTLRGFRDFLPEKMIPRQELIQVARSVYASYGFSPIDTPALEYTEILLGKGGDETD- 63

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +F   D   + +++R+DLT P AR+ A++   +  P + Y I PV+R E+   GRF
Sbjct: 64  --KQMFRFTDQGDRDVAMRFDLTIPFARFAAQHVPQLGTPFKRYHIAPVWRGERPARGRF 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F+QCD D +G+ +  AD E  +++ D L+ +G+   ++ I IN+R++         L 
Sbjct: 122 REFLQCDFDTIGTDSLAADIETALVIHDLLDQIGL--GEFTIHINHRQL-----LNGLLE 174

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-- 243
               L + + +LRA+DKL K G + V   +GE            A + +++   ++    
Sbjct: 175 ELGLLEQAVPLLRALDKLPKIGEEAVVKEMGE-----------AAGVPADKAKRVLGLAA 223

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +    + +  E VKG+  G++    L  ++E   + G   +R+ +  +I RGL+YYT
Sbjct: 224 LKGEPSSVLEQAAEHVKGSERGQEALGALRQLTECCAEVGVAGSRLHLDLSIARGLDYYT 283

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G ++E  L              GSV  GGRYD L   F  Q +P  G S+G+ RL+ A++
Sbjct: 284 GTIFETFLTD--------LPGIGSVCSGGRYDNLAGLFTKQKLPGVGASLGLDRLLAAME 335

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
            L   +          +     DSD L+ YQ  ++ L  AGI +E++   SK  G QLKY
Sbjct: 336 ELGRLS---DVGTTSQVLIPQFDSDRLADYQKLSRRLHAAGIASEVYP-ESKALGKQLKY 391

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           AD++  PLA+I G  E + G  Q+K+L  G + +    +     + +
Sbjct: 392 ADKKKIPLAVIAGADEFAAGNWQLKNLQAGSQETVADADIVEVIQQQ 438


>gi|312128271|ref|YP_003993145.1| histidyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778290|gb|ADQ07776.1| histidyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 421

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 99/469 (21%), Positives = 188/469 (40%), Gaps = 52/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E  +   + +  R + + YG+  +  P  EY++   + + +  D 
Sbjct: 1   MKIQAPKGTKDVLPEESYMWQYVENKFREVCKLYGYQEVRFPTFEYTELFQRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TA  AR   E+   +   P R Y I   FR E    GR
Sbjct: 61  VQKEMYTFLDKGGRSITLRPEGTASTARLFIEHGFASRPMPQRFYYIISAFRYENTQGGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           FR+F Q  ++N GSS+   DAE+  +  +   ++G+         I         ++ + 
Sbjct: 121 FREFHQFGIENFGSSSPVTDAEVISLAYNFFTSIGLDNITVNINSIGCPVCRKEYVKNLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +      +            +     +++L  +          +G  L ++     + +
Sbjct: 181 EYFSANSQKLCTTCH-----QRLDKNPMRILDCKE---------EGCKLVAKDAPKPIDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +     +   +                              K+   IVRGL+YYT
Sbjct: 227 LCDDCKSHFESVKTYLDSAKVL-----------------------YKVDPFIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +                 + GGGRYD L+ +  G ++P  GF+IG+ RL++ L+
Sbjct: 264 KTVFEIVATVSDKELA--------ICGGGRYDNLIEQIGGNSIPGIGFAIGVERLLMLLE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                    +      +       +SL K       LR  GI   +     ++  +Q+KY
Sbjct: 316 QNGLLPAKPR---VPEVFVATVGENSLKKAFEIASRLRFEGISTIIE-EMGRSLKSQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           AD+  C  +II G  E ++G+ +I+++    E   EI+N   + + ++ 
Sbjct: 372 ADKIGCQFSIIIGDDEITKGVCKIRNMKTSSEEIVEIENVCQYLKEKLQ 420


>gi|222528609|ref|YP_002572491.1| histidyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254782306|sp|B9MPF7|SYH_ANATD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|222455456|gb|ACM59718.1| histidyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 421

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 97/469 (20%), Positives = 187/469 (39%), Gaps = 52/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E  +   + +  R + + YG+  +  P  EY++   + + D  D 
Sbjct: 1   MKIQAPKGTKDVLPEESYMWQYVENKFREVCKLYGYQEVRFPTFEYTELFQRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TA  AR   E+   +   P R Y I   FR E    GR
Sbjct: 61  VQKEMYTFLDKGGRSITLRPEGTASTARLFIEHGFASRPMPQRFYYIISAFRYENTQGGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           FR+F Q  ++N GSS+   DAE+  +  +   ++G+         I         ++ + 
Sbjct: 121 FREFHQFGIENFGSSSPVTDAEVISLAYNFFTSLGLDNITVNINSIGCPVCRKEYVKNLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +      +            +     +++L  +          +G  L ++     + +
Sbjct: 181 EYFSANSQKLCHTCH-----QRLDKNPMRILDCKE---------EGCKLITKDAPKPIDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +     +   +   +                          K+   IVRGL+YYT
Sbjct: 227 LCDDCKSHFESVKTYLDSAMV-----------------------SYKVDPFIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +                 + GGGRYD L+ +  G ++   GF+IG+ RL++ L+
Sbjct: 264 KTVFEIVATVSDKELA--------ICGGGRYDNLIEQIGGPSIAGIGFAIGVERLLMLLE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +       + + K     +MLR  GI   +     ++  +Q+KY
Sbjct: 316 QNGLLP---ARSQVPRVFVATIGENGIKKAFEIARMLRFEGISTVVE-EMGRSLKSQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           AD+  C  +II G  E  +G+ +++++    E   EI+N   + + ++ 
Sbjct: 372 ADKIGCEFSIIIGDDEIEKGVCKVRNMKTSSEEIVEIENICEYLKEKLQ 420


>gi|332822160|ref|XP_003310917.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like isoform 4
           [Pan troglodytes]
          Length = 480

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 118/475 (24%), Positives = 209/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 22  KQKFVLKTPKGTRDYSPRQMAVREKVFDIIIRCFKRHGAEVIDTPVFELKETLMGKYGED 81

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 82  ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 137

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+       +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 138 RYREFYQCDFDIAGNFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 196

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 197 VSDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 241

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 242 VQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGLD 300

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 301 YYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 360

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 361 FSIVEQRLEALEEKIRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 420

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 421 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 475


>gi|312134503|ref|YP_004001841.1| histidyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774554|gb|ADQ04041.1| histidyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 421

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 100/469 (21%), Positives = 192/469 (40%), Gaps = 52/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E  +   + +  R I + YG+  +  P  EY++   + + +  D 
Sbjct: 1   MKIQAPKGTKDVLPEESYMWQYVENKFREICKLYGYQEVRFPTFEYTEVFQRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TA  AR   E+   +   P R + I   FR E    GR
Sbjct: 61  VQKEMYTFLDKGGRSITLRPEGTASTARLFIEHGFASRPMPQRFFYIISAFRYENTQGGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           FR+F Q  ++N GSS+   DAE+  +  +   ++G+         I         ++ + 
Sbjct: 121 FREFHQFGIENFGSSSPVTDAEVISLAYNFFTSIGLDNITVNINSIGCPVCRKEYMKNLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +    L +            +F    +++L  +          +   L ++     + +
Sbjct: 181 EYFSANLYKLCTTCH-----QRFDKNPMRILDCKE---------ENCKLIAKDAPKPIDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +    ++   +   +                          K+   IVRGL+YYT
Sbjct: 227 LCDDCKNHFEKVKTYLDSAMVA-----------------------YKVDPFIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E ++                + GGGRYD L+ +  G ++   GF+IG+ RL++ L+
Sbjct: 264 RTVFEVVVTVLDKELA--------ICGGGRYDNLIEQIGGPSIAGIGFAIGVERLLMLLE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                    +      +       +S+ K       LR  GI   +    S++  +Q+KY
Sbjct: 316 QNGLLPAKPQ---IPEVFVAVVGDNSIKKAFEIANKLRFEGISTVIE-EMSRSLKSQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           AD+  C  +II G  E ++G+ +I+++    E   EIKN   + + ++ 
Sbjct: 372 ADKIGCQFSIIIGDDEIAKGVCKIRNMRTSSEEIVEIKNACHYLKKQLQ 420


>gi|296192941|ref|XP_002744290.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 507

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 112/473 (23%), Positives = 199/473 (42%), Gaps = 24/473 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDIIIRCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N    +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLNNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+       +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGNFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQALEGLRDLKLLFEYLALFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +YEA+L        ++P+  GSV  GGRYDGLV  F  +        + I     
Sbjct: 330 YYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERN 389

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
               L  +           +         L +       L  AGI+AE+    +    NQ
Sbjct: 390 FYLPLPQALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQ 449

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           L+Y +    PL  I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 450 LQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 502


>gi|197097766|ref|NP_001126914.1| histidyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|71153562|sp|Q5R4R2|SYHC_PONAB RecName: Full=Histidyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|55733140|emb|CAH93254.1| hypothetical protein [Pongo abelii]
          Length = 509

 Score =  274 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 118/475 (24%), Positives = 210/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+       +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGNFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VSDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +  +    +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQSKQALEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELEDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 504


>gi|148658650|ref|YP_001278855.1| histidyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148570760|gb|ABQ92905.1| histidyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 457

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 147/473 (31%), Positives = 237/473 (50%), Gaps = 35/473 (7%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +  RG  D     + +R  I+D++ +++E YGF+P++TP++EY+++L   + D+    
Sbjct: 4   RVQNIRGMRDHLPSAMILRQYIIDTLTSVFERYGFEPLQTPVVEYAETLDGKIGDD---E 60

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++  +D  G+ ++LRYD T PLAR VA+    ++FP R Y IG  +R E+ G GR+R+
Sbjct: 61  KLIYRFEDHGGRKVALRYDQTVPLARVVAQYQGQLLFPWRRYAIGQSYRGERPGRGRYRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q D+D VGS++  ADAE+  ++ D L A+G     +   I++R+IL GI    GL   
Sbjct: 121 LWQADIDIVGSASPLADAEILAVLTDALTALGFTG--FTTLISHRQILGGIARVSGLDDA 178

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--LS 245
              +      RAIDKLDK G+ GV+  L              + +++   + +++   L 
Sbjct: 179 AAGDVY----RAIDKLDKIGIDGVRNDLL------------QSGVSTAAAERILALIDLQ 222

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D ++ ++ L + ++G     +  + +  I    R  G    RI I+  + RGL YYTG 
Sbjct: 223 GDADEVLNALAQQLQGDERALQAIDNVRAIIGYARAMGVPEERIVIAPRLARGLSYYTGA 282

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E+I+  P           GS+ GGGRYD L+  F G+++P  G + GI RL   ++ L
Sbjct: 283 VFESIVQNPP---------MGSLLGGGRYDELIGMFAGRSIPTVGLAFGIERLHDVMEEL 333

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                               + D  ++     Q LR AG+  E  L  S+  G QL+YAD
Sbjct: 334 GMGP---ASRTIATAFVTLFNPDMAAESLRLAQELRRAGLLVETALDPSEKLGKQLQYAD 390

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           RR  P A++ G  E +RG + +KDL  G + S       S   +       P 
Sbjct: 391 RRGIPYALVIGPDELARGEVVVKDLRSGAQQSVVRSAVASQLRSAADARRTPR 443


>gi|91792615|ref|YP_562266.1| histidyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|122968867|sp|Q12PT3|SYH_SHEDO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|91714617|gb|ABE54543.1| histidyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 424

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 109/501 (21%), Positives = 192/501 (38%), Gaps = 89/501 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R+    YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKVEAVLRSSVSAYGYSEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +   ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNSDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ M+ A   + +G             D      
Sbjct: 117 PQKGRYRQFHQFGVEVYGIGTADIDAEVLMLSARLWQQLGIDEHVSLELNTLGDPSERAA 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +       D    A
Sbjct: 177 YRDALIAFLEQHKDKLDE------------DSQRRMYSNPLRVLDTK-------DSQVQA 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L       ++ +L  + +     L EL+                            + +
Sbjct: 218 LLAD--APALMDYLGEESKTHFSTLCELLDA-----------------------VGIQYR 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G++ PA G
Sbjct: 253 VNPRLVRGLDYYNRTVFEWVTTS--------LGSQGTVLAGGRYDGLVGQLGGKDTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ R+++ L++L  + +   E   V +         L +     Q LR A  G++  
Sbjct: 305 FAMGLERIVLLLETLGLNQDIAPE---VDVYVTAMGDSCLVEAFKVAQELRQALPGLKV- 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      N   Q+K AD+     AII G  E +   + IK L    +             
Sbjct: 361 MSHCGGGNVKKQMKRADKSGAAYAIIIGENELANNQVAIKPLRNNNQ------------- 407

Query: 469 ARVAQITIPISELVSTVKKIL 489
               Q  +    L  T+  ++
Sbjct: 408 ----QELVARDALAETISALI 424


>gi|332822156|ref|XP_003310915.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Pan troglodytes]
 gi|332822158|ref|XP_003310916.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like isoform 3
           [Pan troglodytes]
          Length = 509

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 118/475 (24%), Positives = 209/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDIIIRCFKRHGAEVIDTPVFELKETLMGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+       +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGNFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VSDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEALEEKIRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 504


>gi|295695734|ref|YP_003588972.1| histidyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411336|gb|ADG05828.1| histidyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 424

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 115/469 (24%), Positives = 195/469 (41%), Gaps = 58/469 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   +E  + + I ++ R I   YGF  + TP+LE+++   + + +  D 
Sbjct: 1   MLTQRPRGMHDILPQEASLWHEIEEAARRICARYGFSEVRTPILEHTELFQRGVGENTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ ++LR + TA   R   E+       P + + +GP+FR E+   GR
Sbjct: 61  VEKEMYTFNDRGGRSMTLRPEGTAGAVRAYVEHKFYGGPQPIKWFYLGPMFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQF Q  V+  G +    DAE+  +  D LE +G++      +       R +    L+
Sbjct: 121 QRQFHQFGVEVFGVADPAVDAEVIALGLDFLEDIGLEGLRLELNSVGCPQCRPMYRERLQ 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  ++L          D  D+     ++LL  +  T  +           E+   +
Sbjct: 181 AYYRPLREQL--------CEDCRDRLERNPLRLLDCKRETCKALA---------ERAPRI 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L  +       ++  ++      +    L                       VRGL+
Sbjct: 224 EEALCEECRAHDEGVHRHLEAAGIAYEINPRL-----------------------VRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E +        +      G+V GGGRY+GLV    G +VP  GF+ G+ RLI+
Sbjct: 261 YYTRTAFEVV--------EDGIGAQGTVLGGGRYNGLVEELGGPSVPGIGFAAGLERLIL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+              V +  +    ++  +   + + LR  G RAE      K+   Q
Sbjct: 313 ALEQRRG---EGTSETGVDVFGIALGDEASVELTGWLRRLRALGCRAERGF-EGKSLKAQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           LK ADR     A+I G  ER RG++ +KDLA G++    +   ESW + 
Sbjct: 369 LKAADRLGARWALILGEEERRRGVVMVKDLAGGEQRELPVLEVESWWKE 417


>gi|149726262|ref|XP_001504203.1| PREDICTED: similar to Histidyl-tRNA synthetase-like [Equus
           caballus]
          Length = 509

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 118/475 (24%), Positives = 212/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I + ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIISCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G  +++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPELSQNKQALEGLGDLKLLFEYLTLLGI-ADKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQSPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++     + R ++
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEVDIRREDLVEEIKRRTSE 504


>gi|302391507|ref|YP_003827327.1| histidyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203584|gb|ADL12262.1| histidyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 420

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 106/469 (22%), Positives = 196/469 (41%), Gaps = 52/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   ++      I D+ R+I   Y ++ I TP+ E +D   + + +  D 
Sbjct: 1   MSIKKPRGTNDILPEDSLKWQYIEDTARDICTRYNYEEIRTPIFENTDLFQRGIGEATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TA + R   E+       P + +  GP+FR E+   GR
Sbjct: 61  VEKEMYTFNDKGGRSITLRPEGTASVVRAFLEHKIYGQAQPTKYFYYGPMFRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIG 183
           +RQF Q  V+ +G+ +   DAE+  +    L+ +G+   + H+         +   E++ 
Sbjct: 121 YRQFHQMGVEVLGTDSPAIDAEVISLGLQILKELGLSDLEVHLNSVGCPVCREDYREELR 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            H  D L E        D   ++    +++L  + + +   ++T  A         ++  
Sbjct: 181 DHFADDLEEL-----CSDCQSRYDRNPLRIL--DCKNEKCQEYTADA-------PEIIDS 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D      E+   ++                              I S++VRGL+YYT
Sbjct: 227 LCEDCADHFKEVQNYLQ-----------------------RLDIDYIIDSSLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                ++ GGGRYDGL     G+ +P  GF++G+ R+I+AL+
Sbjct: 264 KTAFEIMYTG--------LGAQDTIFGGGRYDGLAEEIGGREIPGIGFAMGMERIILALE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             +       ++    +        +      Y   LR AG++ EM     ++   Q+K 
Sbjct: 316 EQDVDLPLTTDLD---LFITTIGQPAKETAFEYLYQLRQAGLKVEMDY-LGRSVKGQMKC 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ADR N   +II G  E  +G   ++++  G+E   ++ N        +A
Sbjct: 372 ADRTNAQYSIILGGNELEKGTATVRNMETGEETEIKLNNLVEEMNELIA 420


>gi|6996014|ref|NP_002100.2| histidyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|135123|sp|P12081|SYHC_HUMAN RecName: Full=Histidyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|32460|emb|CAA77607.1| histidyl-tRNA synthetase [Homo sapiens]
 gi|15080052|gb|AAH11807.1| Histidyl-tRNA synthetase [Homo sapiens]
 gi|51873908|gb|AAH80514.1| Histidyl-tRNA synthetase [Homo sapiens]
 gi|119582427|gb|EAW62023.1| histidyl-tRNA synthetase, isoform CRA_c [Homo sapiens]
 gi|261857896|dbj|BAI45470.1| histidyl-tRNA synthetase [synthetic construct]
 gi|325463225|gb|ADZ15383.1| histidyl-tRNA synthetase [synthetic construct]
          Length = 509

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 118/475 (24%), Positives = 209/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+       +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGNFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VSDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEALEEKIRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 450 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 504


>gi|152976821|ref|YP_001376338.1| histidyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082285|sp|A7GT85|SYH_BACCN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|152025573|gb|ABS23343.1| histidyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 423

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 101/468 (21%), Positives = 185/468 (39%), Gaps = 51/468 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGSVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYTFQDRGDRSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +    +        E +
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLGDPASRQAHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H   ++ E        D   +     +++L  +   D+                 +  
Sbjct: 181 IAHFKPRIGEF-----CSDCQSRLEKNPLRILDCKRDRDHE---------LMNTAPSITD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++ EL+                              +    +VRGL+YY
Sbjct: 227 YLNEESTAYYEKVQELLT-----------------------MMGVPFEKDPNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 264 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR +G+  E     ++    Q K
Sbjct: 318 KAENIELPIENTIDC---YVVALGDKAKDHAAKVAFDLRKSGLSVEKDY-LNRKMKAQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR N     + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 374 SADRLNAKYVAVLGEDELDKGVINLKDMATGEQEEVALDVFASYIAEK 421


>gi|146295715|ref|YP_001179486.1| histidyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166227954|sp|A4XHB0|SYH_CALS8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|145409291|gb|ABP66295.1| histidyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 419

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 101/471 (21%), Positives = 183/471 (38%), Gaps = 58/471 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E  I   +    R I + YG+  +  P  EY++   + + +  D 
Sbjct: 1   MKIQAPKGTKDVLPEESYIWQYVESKFRQICKLYGYQEVRFPTFEYTELFQRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TA +AR   E+   +   P R Y I   FR E    GR
Sbjct: 61  VQKEMYTFLDKGGRSITLRPEGTASVARLFIEHGFASRPMPQRLYYIISAFRYENTQGGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG----IKRNDYHIGINNRKILDGILE 180
           +R+F Q  ++N GS +   DAE+  +  +   ++G    +   +       RK     L+
Sbjct: 121 YREFHQFGIENFGSKSPVTDAEIISLSYNFFVSLGLDNIVVNINSIGCPVCRKDYVKNLK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +  L   DKL              +     +++L  +              L ++     
Sbjct: 181 EYFLGYYDKL--------CPTCKQRLDKNPMRILDCKE---------DNCKLIAQDAPKP 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L  + +     L   +                              K+   IVRGL+
Sbjct: 224 IEYLCDECKTHFEALKGYLDAAGVC-----------------------YKVDPYIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E +                 + GGGRYD L+ +  G + P  GF+IG+ RLI+
Sbjct: 261 YYTRTVFEIVDVVLDKELA--------ICGGGRYDNLIEQIGGSSTPGIGFAIGVERLIM 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L          +      +        +  K       LR  GI   +    S++  +Q
Sbjct: 313 LLSQKGLIPQKPQ---VPQVFIATLGDLATKKAFEIASTLRFEGISTVIE-ELSRSLKSQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           +KYAD+  C  A+I G  E  +G+ +++++    E    I+      ++++
Sbjct: 369 MKYADKLGCDFAVIIGDDELEKGVCKVREMKTSSEEVVRIEGLAQHIKSKI 419


>gi|312898875|ref|ZP_07758263.1| histidyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620037|gb|EFQ03609.1| histidyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 421

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 98/467 (20%), Positives = 192/467 (41%), Gaps = 52/467 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +    PRG  D   ++     ++ + IR+I   YGF  + TP+ E ++   + + +  D 
Sbjct: 1   MAITAPRGTQDFLPEQTGDWQKLEEKIRSICRIYGFGEVRTPIFESTELFLRGIGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ ++LR + TA + R   E+           Y +GP+FR+++   GR
Sbjct: 61  VTKEMYTFEDRGGRSMTLRPENTASVVRAYLEHKLYGEQKVHKFYYMGPMFRHDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIG 183
           +RQF Q  V+ +GS     DAE+  M       +G+     H+      K      +K+ 
Sbjct: 121 YRQFNQFGVEEIGSQDPAVDAEIIAMAFQLFRELGLNDLVLHLNSVGCPKCRPVYRQKLI 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              D K +E        D   +     +++L  +   +            SE + ++  +
Sbjct: 181 EFFDGKRDEL-----CDDCKSRLDKNPLRVLDCKEDGERM---------LSEGVPLITDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +  +   ++   + G     +    L                       VRGL+YYT
Sbjct: 227 LCEECAEHFEKVQSYLTGIGISFEKDPRL-----------------------VRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                +V GGGRYDGL+    G +VP  GF++G+ RL++ LK
Sbjct: 264 KTAFEIMYA--------PLGAQSTVCGGGRYDGLIEEIGGPSVPGIGFAVGMERLLLTLK 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                    +         +    ++  +  +  Q LR   + AE+   + ++   Q+K 
Sbjct: 316 EQGLLPPVEELRPA---YIVALGDEARKEAFILQQALRAKSLYAEID-TNGRSMKGQMKA 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           A++ N    +I G  E ++G  QI+++   ++ +  + +   + E++
Sbjct: 372 ANKINADFTVIIGEDELAQGQAQIRNMETKEQETVALGDVVEYIESK 418


>gi|302871212|ref|YP_003839848.1| histidyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574071|gb|ADL41862.1| histidyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 421

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 100/469 (21%), Positives = 190/469 (40%), Gaps = 52/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E  +   + +  R I + YG+  +  P  EY++   + + +  D 
Sbjct: 1   MKIQAPKGTKDVLPEESYMWQYVENKFREICKLYGYQEVRFPTFEYTELFQRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TA  AR   E+   +   P R Y I   FR E    GR
Sbjct: 61  VQKEMYTFLDKGGRSITLRPEGTASTARLFIEHGFASRPMPQRFYYIISAFRYENTQGGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           FR+F Q  ++N GSS+   DAE+  +  +   ++G+         I         ++ + 
Sbjct: 121 FREFHQFGIENFGSSSPVTDAEVISLAYNFFTSIGLDNITVNINSIGCPVCRKEYVKNLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +      +            +     +++L  +          +   L ++     + +
Sbjct: 181 EYFSANSQKLCATCH-----QRLDKNPMRILDCKE---------ENCKLVAKDAPKPIDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +    ++   +   +                          K+   IVRGL+YYT
Sbjct: 227 LCDDCKNHFEKVKTYLDSAMVA-----------------------YKVDPFIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E ++                + GGGRYD L+ +  G ++   GF+IG+ RL++ L+
Sbjct: 264 KTVFEVVVTVSDKELA--------ICGGGRYDNLIEQIGGPSIAGIGFAIGVERLLMLLE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                    +      +       +S+ K       LR  GI   +    S++  +Q+KY
Sbjct: 316 QNGLLPVKPQ---IPEVFVAVVGDNSIRKAFEIANKLRFEGISTVIE-EMSRSLKSQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           AD+  C  +II G  E ++G+ +I+++    E   EIKN   + + +V 
Sbjct: 372 ADKLGCQFSIIIGDDEIAKGVCKIRNMRTSSEEIVEIKNACHYLKKQVQ 420


>gi|331673969|ref|ZP_08374732.1| histidine--tRNA ligase [Escherichia coli TA280]
 gi|331069242|gb|EGI40634.1| histidine--tRNA ligase [Escherichia coli TA280]
          Length = 424

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|323702180|ref|ZP_08113847.1| histidyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532867|gb|EGB22739.1| histidyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 419

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/466 (21%), Positives = 195/466 (41%), Gaps = 52/466 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D    E+     + +  R +   YG+  I TP+ E+++   + + +  D 
Sbjct: 1   MLTTRPRGTNDILPGEVEKWQYLEELARQVCREYGYSEIRTPIFEHTELFARGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + I+LR + TA + R   EN    +  P + + IGP+FR ++   GR
Sbjct: 61  VEKEMYTFTDRGDRSITLRPEGTAAVVRAYLENKLYALPQPIKLFYIGPMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE-KIG 183
           FRQF Q  V+  GS++   DAE+  M  D    +G+   + HI          +L  K+ 
Sbjct: 121 FRQFHQFGVEVFGSNSPAVDAEVIAMAMDIYHRIGLTNLELHINSVGCPQCRPVLRQKLQ 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +   +L E            +F    +++L  + +++   +  + A  T + +      
Sbjct: 181 EYFRPQLAELCPNC-----QGRFDRNPLRIL--DCKSEKCQEIGRHAPTTLDVL------ 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                                  +      ++   +   G    +  + + +VRGL+YYT
Sbjct: 228 ---------------------CPECQAHFELVKGYLDAVG---VKYIVDNRLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                S+GGGGRY+GL+    G   P  GF++G+ R+++  +
Sbjct: 264 NTAFEIMTRD--------IGAQSSIGGGGRYNGLIEACGGSAAPGIGFALGLERILLTAE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
               +   I     V + T+   +++  +     Q LR  GI A+      ++   Q+KY
Sbjct: 316 RQGIT-FPISRGPAVFVATVGAGAET--ESFALVQKLRRHGIAADKDY-LGRSLKAQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           A + +  L II G  E SRG+  ++++  G +    + +  S+ + 
Sbjct: 372 AGKLDARLVIILGEEELSRGVAVVRNMQAGSQEEVPLADIISYVKE 417


>gi|56963341|ref|YP_175072.1| histidyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81678918|sp|Q5WHP4|SYH1_BACSK RecName: Full=Histidyl-tRNA synthetase 1; AltName:
           Full=Histidine--tRNA ligase 1; Short=HisRS 1
 gi|56909584|dbj|BAD64111.1| histidyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 426

 Score =  272 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 103/468 (22%), Positives = 184/468 (39%), Gaps = 49/468 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D    +  I   I    +   E Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQLPRGTQDILPDDAAIWQYIEQVAKETCETYHYQEIRTPIFEHTEIFSRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV--FPCRTYRIGPVFRNEKHGPG 123
             K +++  D  G+ ++LR + TA + R    +        P + Y  GP+FR E+   G
Sbjct: 61  VQKEMYTFSDRGGRSLTLRPEGTAAVVRSYVNHKLYASPAQPTKLYYTGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF+Q  V+ +GS++   DAE+  ++    + +G+      I             +  
Sbjct: 121 RMRQFVQFGVEALGSASPQLDAEVLALLIAICKKLGLVNLKLVINSLGDSESRQAHREAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +  I     D   +     +++L  +   ++    T            ++ +
Sbjct: 181 IAH----FKPSIDEFCSDCQMRLEKNPLRILDCKKDREHPLMAT---------APSILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ +       L E +                          +    +  T+VRGL+YY 
Sbjct: 228 LNEESRAYFQSLKETLD-----------------------LLNIPYVVDPTLVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +   P            ++ GGGRY+GLV  F G   P  GF+  I R I+A+K
Sbjct: 265 HTAFELLSTAPGF------GAITTLCGGGRYNGLVQEFGGPETPGIGFAFSIERFILAMK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +        + +    + T+  ++  L       Q LR  GIRA+      K    QLK 
Sbjct: 319 AENVDLPVPQSLD-AYVVTLGDEASRLGP--QLLQRLRDGGIRADKDY-LGKKMKAQLKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ADR      II G  E ++    +K +A G++    I +  S+ + ++
Sbjct: 375 ADRYQASYTIIIGEDEIAKQQALVKQMATGEQTVVAISDLTSFLQEQI 422


>gi|196039347|ref|ZP_03106653.1| histidine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029974|gb|EDX68575.1| histidine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 476

 Score =  272 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 103/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +K++A G++    +    S+   +
Sbjct: 427 SADRLKAKFVAVLGEDELDKGIINLKNMATGEQEEVALDVFASYVAEK 474


>gi|229032054|ref|ZP_04188036.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228729246|gb|EEL80241.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 476

 Score =  272 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 427 SADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 474


>gi|229175078|ref|ZP_04302595.1| Histidyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228608374|gb|EEK65679.1| Histidyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 476

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGSVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 427 SADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 474


>gi|289578234|ref|YP_003476861.1| histidyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527947|gb|ADD02299.1| histidyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 418

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 105/465 (22%), Positives = 189/465 (40%), Gaps = 50/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E      + + IR I ++YGF  I TP  E+++   + + +  D 
Sbjct: 1   MLTKAPRGTKDILPSESYKWQYVEELIRKICDDYGFREIRTPGFEHTELFLRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+L+ + T+P  R   E+       P + Y I PV+R E+   GR
Sbjct: 61  VRKEMYTFTDKGGRSITLKPEGTSPAVRAFIEHNLYAEAQPTKLYYITPVYRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q  V+  G+ + +ADAE+  +    L+ +G+   +  I            +    
Sbjct: 121 LREHHQFGVEIFGAKSASADAEVISVAITLLKKLGLNNLELRINSVGCSACR---KNYNK 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L + L  L   D   ++ +  +++L  +          +     ++   ++  +L
Sbjct: 178 VLKDFLKDNLKYL-CDDCKVRYEINPLRVLDCK---------VESCQRITKDAPLITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +    EL + +                               I   IVRGL+YYT 
Sbjct: 228 CDDCKNHFEELQKYLD-----------------------VMGYNYIIDPRIVRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E I         +     G+V GGGRYDGL+    G ++P  GF +G+ RL++ L+ 
Sbjct: 265 TAFEII--------SKDIGAQGTVCGGGRYDGLIEECGGPSMPGVGFGMGLERLLLTLEQ 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +  K+   V +       ++          LR  G++ E      ++   Q+KYA
Sbjct: 317 KGIEISKPKD---VDLFIAYVGEEAKLFTFALANKLRFNGLKVERD-NMDRSLKAQMKYA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           ++ N   AI+ G  E     +++KD+  G E+   I   E   + 
Sbjct: 373 NKLNAKFAIVIGEEEMKENKVKLKDMRDGSEVEISIDEIEQRIKN 417


>gi|209919991|ref|YP_002294075.1| histidyl-tRNA synthetase [Escherichia coli SE11]
 gi|293446867|ref|ZP_06663289.1| histidyl-tRNA synthetase [Escherichia coli B088]
 gi|331669260|ref|ZP_08370108.1| histidine--tRNA ligase [Escherichia coli TA271]
 gi|229558664|sp|B6I586|SYH_ECOSE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|209913250|dbj|BAG78324.1| histidyl-tRNA synthase [Escherichia coli SE11]
 gi|291323697|gb|EFE63125.1| histidyl-tRNA synthetase [Escherichia coli B088]
 gi|323944736|gb|EGB40803.1| histidyl-tRNA synthetase [Escherichia coli H120]
 gi|324020074|gb|EGB89293.1| histidyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|331064454|gb|EGI36365.1| histidine--tRNA ligase [Escherichia coli TA271]
          Length = 424

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/480 (22%), Positives = 184/480 (38%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +     +       
Sbjct: 177 YRDALVAFLEQYKDKLDE------------DCKRRMYTNPLRVLDSKNPEVQA------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  +  +    L +L++           L                  
Sbjct: 218 --LLNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       K    V I  +   +D+ S      + LR    G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|283779955|ref|YP_003370710.1| histidyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283438408|gb|ADB16850.1| histidyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 442

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 157/487 (32%), Positives = 241/487 (49%), Gaps = 50/487 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR 65
           +      GF D   + +  R R++ + + +Y ++GF PI+TP LEY + L GK   + DR
Sbjct: 2   IEPRTLAGFRDYLPEAMMPRERLIATAQKVYRSFGFVPIDTPALEYLEILSGKGGEESDR 61

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               ++  +D+ G+ + +R+DLT PLAR+ A++   +  P + Y I  V+R E+   GR+
Sbjct: 62  ---QMYRFEDNGGRMVGMRFDLTVPLARFAAQHVGQLGLPFKRYHIATVWRGERAQHGRY 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F+QCD D +G+ +  AD E   ++ + L+A+GI R  + I +NNR +L G+LE +GL 
Sbjct: 119 REFMQCDFDTIGTKSVAADIETACVIHELLQAIGISR--FTIRVNNRAVLTGLLENLGLA 176

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               L     VLRAIDKL K   + V   L           T  A  T+EQ   ++ F S
Sbjct: 177 DKSTL-----VLRAIDKLPKSTPEKVVEEL-----------TAVAGCTAEQAADVLKFAS 220

Query: 246 IDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           I    ++ + +L  LV G+  GE G   L  I      +G  ++ +++  +I RGL+YYT
Sbjct: 221 IGGTADEILTQLQPLVAGSEKGEAGVERLSEILRGAAAAGVPASHLQLDVSIARGLDYYT 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G ++E  L              GSV  GGRYD L + +  Q +P  G S+G+ RL+ AL+
Sbjct: 281 GAIFETFLTDLPK--------IGSVCSGGRYDNLAALYTKQELPGIGASLGLDRLLAALE 332

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
            L       K   P  +     D   L+ Y      +R AGI  EMF   +K  G QL+Y
Sbjct: 333 DLG---MIEKVRTPAPVLVAFFDKTQLTAYLEIASAIRRAGIGCEMFPD-AKKLGQQLQY 388

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           AD+R   +AI+ G  E +  M+Q+KDL  G+                          L  
Sbjct: 389 ADKRGFRVAIVAGDRELAAKMVQVKDLKTGETQEVSTAE--------------SFDALTQ 434

Query: 484 TVKKILQ 490
            ++KIL 
Sbjct: 435 AIQKILA 441


>gi|331653942|ref|ZP_08354943.1| histidine--tRNA ligase [Escherichia coli M718]
 gi|331048791|gb|EGI20867.1| histidine--tRNA ligase [Escherichia coli M718]
          Length = 424

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YREALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|228923155|ref|ZP_04086446.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836534|gb|EEM81884.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 476

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/469 (21%), Positives = 187/469 (39%), Gaps = 51/469 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEK 181
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +    +        + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLGDTASRQAHRDA 232

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +  H + ++ E        D   +     +++L  + + D + +    A         + 
Sbjct: 233 LIAHFEPRIGEF-----CSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSIT 278

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L+ D      ++ EL+                              +    +VRGL+Y
Sbjct: 279 EYLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDY 315

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+A
Sbjct: 316 YQHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMA 369

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           LK+          +       +     +          LR AG+  E      +    Q 
Sbjct: 370 LKAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQF 425

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           K ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 426 KSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 474


>gi|323170213|gb|EFZ55866.1| histidyl-tRNA synthetase [Escherichia coli LT-68]
          Length = 424

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELQGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|62766469|gb|AAX99363.1| histidyl-tRNA synthetase [Homo sapiens]
          Length = 509

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 118/475 (24%), Positives = 209/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+       +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGNFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VSDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLAEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    +           +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEALEEKIRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 450 NQLQYCEEAGTPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 504


>gi|301055912|ref|YP_003794123.1| histidyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378081|gb|ADK06985.1| histidyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 476

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/469 (21%), Positives = 187/469 (39%), Gaps = 51/469 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEK 181
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +    +        + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAYRDA 232

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +  H + ++ E        D   +     +++L  + + D + +    A         + 
Sbjct: 233 LIAHFEPRIGEF-----CSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSIT 278

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L+ D      ++ EL+                              +    +VRGL+Y
Sbjct: 279 EYLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDY 315

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+A
Sbjct: 316 YQHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMA 369

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           LK+          +       +     +          LR AG+  E      +    Q 
Sbjct: 370 LKAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLTVEKDY-LDRKMKAQF 425

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           K ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 426 KSADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 474


>gi|12847965|dbj|BAB27775.1| unnamed protein product [Mus musculus]
          Length = 509

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 117/475 (24%), Positives = 209/475 (44%), Gaps = 26/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +         ++  ++ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVCG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 226 VPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL+
Sbjct: 271 VQQHGGVSLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLILFGI-DDKISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L        ++P+  GS+  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    ++          +         L +       L  AGI+AE+    +    
Sbjct: 390 FSIVEQRLEASEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++       R  Q
Sbjct: 450 NQLQYWEEAGIPLVAIIGEQELRDGVIKLRSVASREEVDVRREDLVEEIRRRTNQ 504


>gi|229141141|ref|ZP_04269682.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|228642304|gb|EEK98594.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|324328306|gb|ADY23566.1| histidyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 476

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYEKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 427 SADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 474


>gi|295706712|ref|YP_003599787.1| histidyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804371|gb|ADF41437.1| histidyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 422

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 92/468 (19%), Positives = 184/468 (39%), Gaps = 49/468 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    ++     +    R I   + +  I TP+ E+++   + + +  D 
Sbjct: 1   MSVQIPRGTQDILPGKVEYWQFVEQRAREICRAFNYQEIRTPMFEHTELFLRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D   + ++LR + TA + R    N        P + + IGP+FR E+   G
Sbjct: 61  VQKEMYTFKDRGDRSLTLRPEGTAAVGRSFVSNKMFGNPTQPTKLFYIGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           RFRQF+Q  V+ +G +    DAE+  ++    +++G+K+    +             +  
Sbjct: 121 RFRQFVQFGVEALGVNDPAIDAEVLALLMSFYQSLGLKKLKLVVNSLGDTESRQAHRQAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +          I     D   +     +++L  +   D+    T            ++ +
Sbjct: 181 IDH----FAPRIGEFCSDCQSRLEKNPLRILDCKKDRDHELMAT---------APSILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+    +   ++ + +                               +  T+VRGL+YY 
Sbjct: 228 LNDYSREYFEKVQQYLTDLDID-----------------------YVVDPTLVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E       M+E +      ++ GGGRY+GL+    G   P  GF++ I RL+ AL+
Sbjct: 265 HTAFEL------MSEAEGFGAITTLCGGGRYNGLIQEIGGPETPGIGFALSIERLLSALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +       +     V    +    ++  K       LR AG  A+      K    Q K 
Sbjct: 319 AEGI---ELPVETGVDCYVVTMGDEAKEKSVSIVNTLRRAGFVADKDY-QDKKMKAQFKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ADR      ++ G  E ++ ++ +K++  G++    I    S+ + +V
Sbjct: 375 ADRVQAKFVVVLGEDELAKQVVNVKNMESGEQQEVSIDQLVSYLQKQV 422


>gi|189236717|ref|XP_974715.2| PREDICTED: similar to Histidyl-tRNA synthetase CG6335-PA [Tribolium
           castaneum]
          Length = 514

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 121/494 (24%), Positives = 223/494 (45%), Gaps = 44/494 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   + P+G  D   +++ +RN +LD I ++++ +G + I+TP+ E  + L     ++
Sbjct: 54  PQKFTLKTPKGTRDFSPEQMALRNTVLDKIISVFKKHGAETIDTPIFELKEVLTGKYGED 113

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 114 ---SKLIYDLKDQGGEILSLRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPSIARG 169

Query: 124 RFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           R+R+F QCD D          D E   ++ + L+ +G+  + + I +N+R +LDG+ E  
Sbjct: 170 RYREFYQCDFDIAGAYDPMIPDTECVKIVYEILKVLGM--DQFTIKLNHRLLLDGLFEAC 227

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+  D    +   +  A+DKLDK     VK  + E              L     D++  
Sbjct: 228 GVPKD----KFRSICSAVDKLDKSPWSEVKKEMVEE-----------KGLEESVADLIGE 272

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS--NRIKISSTIVRGLE 300
           ++ ++ ++ + E     +  +  +     L  I  ++    + +  ++I    ++ RGL+
Sbjct: 273 YVQLNGQEDLVEKLLKDERLLKSKLAVEGLEAIKLILHYCAFYNISDKISFDLSLARGLD 332

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG--LVSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L F            GS+ GGGRYD    +   K + VP  G SIGI R+
Sbjct: 333 YYTGIIYEAVLCFQGDAGGDSEFSVGSIAGGGRYDNLVSMFDSKHKQVPCVGVSIGIERI 392

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              L++  ++ N       V +       + + +       L   G + E     +    
Sbjct: 393 FAVLEAKYAAANKKIRTTEVQVYVASAQKNLVEERMKLCNHLWDEGFKVEHSYKKNPKLL 452

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            QL++ +    PLA+I G  E  RG+++++++    E+                   +P 
Sbjct: 453 VQLQHCEEYGIPLAVILGESEIQRGVVKLREVKSRNEV------------------EVPR 494

Query: 479 SELVSTVKKILQEN 492
           ++L   ++K+LQ++
Sbjct: 495 TQLADEIRKMLQKS 508


>gi|294501365|ref|YP_003565065.1| histidyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351302|gb|ADE71631.1| histidyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 422

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 92/468 (19%), Positives = 185/468 (39%), Gaps = 49/468 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    ++     +    R I   + +  I TP+ E+++   + + +  D 
Sbjct: 1   MSVQIPRGTQDILPGKVEYWQFVEQRAREICRAFNYQEIRTPMFEHTELFLRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D   + ++LR + TA + R    N        P + + IGP+FR E+   G
Sbjct: 61  VQKEMYTFKDRGDRSLTLRPEGTAAVGRSFVSNKMFGNPTQPTKLFYIGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           RFRQF+Q  V+ +G +    DAE+  ++    +++G+K+    +             +  
Sbjct: 121 RFRQFVQFGVEALGVNDPAIDAEVLALLMSFYQSLGLKKLKLVVNSLGDTESRQAHRQAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +          I     D   +     +++L  +   D+    T            ++ +
Sbjct: 181 IDH----FAPRIGEFCSDCQSRLEKNPLRILDCKKDRDHELMAT---------APSILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+   ++   ++ + +                               +  T+VRGL+YY 
Sbjct: 228 LNDYSKEYFEKVQQYLTDLDID-----------------------YVVDPTLVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E       M+E +      ++ GGGRY+GL+    G   P  GF++ I RL+ AL+
Sbjct: 265 HTAFEL------MSEAEGFGAITTLCGGGRYNGLIQEIGGPETPGIGFALSIERLLSALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +       +     V    +    ++  K       LR AG  A+      K    Q K 
Sbjct: 319 AEGI---ELPVETGVDCYVVTMGDEAKEKSVSIVNTLRRAGFVADKDY-QDKKMKAQFKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ADR      ++ G  E ++ ++ +K++  G++    I    S+ + +V
Sbjct: 375 ADRVQAKFVVVLGDDELAKQVVNVKNMESGEQQEVSIDQLVSYLQQQV 422


>gi|229081668|ref|ZP_04214163.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228701672|gb|EEL54163.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 462

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 39  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 98

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 99  IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 158

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 159 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 214

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 215 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 265

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 266 YLNEDSAIYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 302

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 303 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 356

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 357 KAENIELPLEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 412

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 413 SADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 460


>gi|74313040|ref|YP_311459.1| histidyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|123745955|sp|Q3YZ38|SYH_SHISS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|73856517|gb|AAZ89224.1| histidine tRNA synthetase [Shigella sonnei Ss046]
 gi|323169042|gb|EFZ54719.1| histidyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 424

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGIFEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|24113843|ref|NP_708353.1| histidyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30063906|ref|NP_838077.1| histidyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|39932171|sp|Q83K44|SYH_SHIFL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|24052934|gb|AAN44060.1| histidine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30042161|gb|AAP17887.1| histidine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|281601916|gb|ADA74900.1| Histidyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|313651000|gb|EFS15400.1| histidyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|332754201|gb|EGJ84569.1| histidyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332755564|gb|EGJ85928.1| histidyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332756364|gb|EGJ86715.1| histidyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332766347|gb|EGJ96557.1| histidyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333000702|gb|EGK20278.1| histidyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333001703|gb|EGK21269.1| histidyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333002309|gb|EGK21873.1| histidyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333016132|gb|EGK35464.1| histidyl-tRNA synthetase [Shigella flexneri K-227]
 gi|333016432|gb|EGK35763.1| histidyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 424

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGIFEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELLGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|215487864|ref|YP_002330295.1| histidyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312965430|ref|ZP_07779662.1| histidyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|331648211|ref|ZP_08349301.1| histidine--tRNA ligase [Escherichia coli M605]
 gi|254782329|sp|B7UGW0|SYH_ECO27 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|215265936|emb|CAS10345.1| histidyl tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|281179568|dbj|BAI55898.1| histidyl-tRNA synthetase [Escherichia coli SE15]
 gi|312289850|gb|EFR17738.1| histidyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|320662798|gb|EFX30130.1| histidyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|330912289|gb|EGH40799.1| histidyl-tRNA synthetase [Escherichia coli AA86]
 gi|331043071|gb|EGI15211.1| histidine--tRNA ligase [Escherichia coli M605]
          Length = 424

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +              +  
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKN---------PEVQVLL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|228910239|ref|ZP_04074057.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228849403|gb|EEM94239.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 476

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPLEHSIDC---YVVALGEKAKDHAAKVAFNLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 427 SADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 474


>gi|229198530|ref|ZP_04325234.1| Histidyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228585033|gb|EEK43147.1| Histidyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 476

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYEKVQELL-----------------------MMMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 427 SADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 474


>gi|315282432|ref|ZP_07870848.1| histidyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613921|gb|EFR87649.1| histidyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 425

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 105/472 (22%), Positives = 191/472 (40%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    + + ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKKVCENYRYEEIRTPIFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +  +    +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDNPSIDVEVISLAMEFFRKIGLTNIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D+            +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHDHP---------LIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+                    E+       +   +   G      +I  T+VRGL+YY
Sbjct: 227 FLN--------------------EESVAYFENVKSYLDALGVP---FEIDPTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVKEFGGPDTPGIGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 318 EKADI---EIPAKKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R+N    II G  E   G  Q+K++  G++ +               + 
Sbjct: 374 DANRKNAVYTIILGEEELQSGNYQLKNMETGEQEAVSETTILEKLTNTKGEK 425


>gi|228987655|ref|ZP_04147769.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228772115|gb|EEM20567.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 476

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQS 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 427 SADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 474


>gi|324113008|gb|EGC06984.1| histidyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|325496453|gb|EGC94312.1| histidyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 424

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 186/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+        + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQPAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFGRADKWGARIAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|320200078|gb|EFW74667.1| Histidyl-tRNA synthetase [Escherichia coli EC4100B]
          Length = 424

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +              +  
Sbjct: 177 YRDALVTFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKN---------PEVQVLL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDKESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELQGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|170292177|pdb|2EL9|A Chain A, Crystal Structure Of E.Coli Histidyl-Trna Synthetase
           Complexed With A Histidyl-Adenylate Analogue
 gi|170292178|pdb|2EL9|B Chain B, Crystal Structure Of E.Coli Histidyl-Trna Synthetase
           Complexed With A Histidyl-Adenylate Analogue
 gi|170292179|pdb|2EL9|C Chain C, Crystal Structure Of E.Coli Histidyl-Trna Synthetase
           Complexed With A Histidyl-Adenylate Analogue
 gi|170292180|pdb|2EL9|D Chain D, Crystal Structure Of E.Coli Histidyl-Trna Synthetase
           Complexed With A Histidyl-Adenylate Analogue
          Length = 431

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 8   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 64  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 123

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 124 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 183

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 184 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 226

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 227 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 264

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 265 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 315

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 316 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 372

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 373 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 427


>gi|15803037|ref|NP_289067.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15832630|ref|NP_311403.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|16130439|ref|NP_417009.1| histidyl tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|26248878|ref|NP_754918.1| histidyl-tRNA synthetase [Escherichia coli CFT073]
 gi|89109320|ref|AP_003100.1| histidyl tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|91211840|ref|YP_541826.1| histidyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110642679|ref|YP_670409.1| histidyl-tRNA synthetase [Escherichia coli 536]
 gi|117624743|ref|YP_853656.1| histidyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|157155202|ref|YP_001463836.1| histidyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157161989|ref|YP_001459307.1| histidyl-tRNA synthetase [Escherichia coli HS]
 gi|168748427|ref|ZP_02773449.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168756286|ref|ZP_02781293.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168761124|ref|ZP_02786131.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168768606|ref|ZP_02793613.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168773572|ref|ZP_02798579.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168778480|ref|ZP_02803487.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168787860|ref|ZP_02812867.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168798885|ref|ZP_02823892.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|170019203|ref|YP_001724157.1| histidyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170082124|ref|YP_001731444.1| histidyl tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170682103|ref|YP_001744702.1| histidyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188493703|ref|ZP_03000973.1| histidyl-tRNA synthetase [Escherichia coli 53638]
 gi|191167687|ref|ZP_03029496.1| histidyl-tRNA synthetase [Escherichia coli B7A]
 gi|191172621|ref|ZP_03034160.1| histidyl-tRNA synthetase [Escherichia coli F11]
 gi|193064075|ref|ZP_03045160.1| histidyl-tRNA synthetase [Escherichia coli E22]
 gi|193068437|ref|ZP_03049400.1| histidyl-tRNA synthetase [Escherichia coli E110019]
 gi|194427379|ref|ZP_03059929.1| histidyl-tRNA synthetase [Escherichia coli B171]
 gi|194437576|ref|ZP_03069672.1| histidyl-tRNA synthetase [Escherichia coli 101-1]
 gi|195936656|ref|ZP_03082038.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208808608|ref|ZP_03250945.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208813413|ref|ZP_03254742.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208819784|ref|ZP_03260104.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209398087|ref|YP_002271984.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217327485|ref|ZP_03443568.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218555039|ref|YP_002387952.1| histidyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218559440|ref|YP_002392353.1| histidyl-tRNA synthetase [Escherichia coli S88]
 gi|218690634|ref|YP_002398846.1| histidyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218701024|ref|YP_002408653.1| histidyl-tRNA synthetase [Escherichia coli IAI39]
 gi|227887549|ref|ZP_04005354.1| histidine--tRNA ligase [Escherichia coli 83972]
 gi|237705024|ref|ZP_04535505.1| histidyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|238901679|ref|YP_002927475.1| histidyl tRNA synthetase [Escherichia coli BW2952]
 gi|253772592|ref|YP_003035423.1| histidyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254162488|ref|YP_003045596.1| histidyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|254794460|ref|YP_003079297.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|256021800|ref|ZP_05435665.1| histidyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260845144|ref|YP_003222922.1| histidyl tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260856608|ref|YP_003230499.1| histidyl tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260869203|ref|YP_003235605.1| histidyl tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|261223054|ref|ZP_05937335.1| histidyl tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261259395|ref|ZP_05951928.1| histidyl tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291283735|ref|YP_003500553.1| Histidyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|293410928|ref|ZP_06654504.1| histidyl-tRNA synthetase [Escherichia coli B354]
 gi|293415779|ref|ZP_06658422.1| histidyl-tRNA synthetase [Escherichia coli B185]
 gi|297518016|ref|ZP_06936402.1| histidyl-tRNA synthetase [Escherichia coli OP50]
 gi|300817716|ref|ZP_07097931.1| histidyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300820816|ref|ZP_07100966.1| histidyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300904312|ref|ZP_07122169.1| histidyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300927123|ref|ZP_07142871.1| histidyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300930154|ref|ZP_07145575.1| histidyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300940235|ref|ZP_07154833.1| histidyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300981976|ref|ZP_07175822.1| histidyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300998070|ref|ZP_07181930.1| histidyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301022374|ref|ZP_07186261.1| histidyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301024746|ref|ZP_07188386.1| histidyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301047147|ref|ZP_07194242.1| histidyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301302871|ref|ZP_07208999.1| histidyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301330395|ref|ZP_07223037.1| histidyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|306814416|ref|ZP_07448578.1| histidyl-tRNA synthetase [Escherichia coli NC101]
 gi|307312491|ref|ZP_07592124.1| histidyl-tRNA synthetase [Escherichia coli W]
 gi|309794439|ref|ZP_07688862.1| histidyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|331658659|ref|ZP_08359603.1| histidine--tRNA ligase [Escherichia coli TA206]
 gi|331664077|ref|ZP_08364987.1| histidine--tRNA ligase [Escherichia coli TA143]
 gi|331678505|ref|ZP_08379180.1| histidine--tRNA ligase [Escherichia coli H591]
 gi|331684162|ref|ZP_08384758.1| histidine--tRNA ligase [Escherichia coli H299]
 gi|46397736|sp|P60906|SYH_ECOLI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|46397737|sp|P60907|SYH_ECOL6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|46397738|sp|P60908|SYH_ECO57 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123048980|sp|Q0TEX1|SYH_ECOL5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123387854|sp|Q1R8L9|SYH_ECOUT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227966|sp|A1AE52|SYH_ECOK1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166980045|sp|A7ZPV7|SYH_ECO24 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166980046|sp|A8A320|SYH_ECOHS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189082294|sp|B1IWE7|SYH_ECOLC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226737070|sp|B7MHZ9|SYH_ECO45 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226737071|sp|B7NRG4|SYH_ECO7I RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226737072|sp|B7M7L8|SYH_ECO8A RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226737074|sp|B1LNG9|SYH_ECOSM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558670|sp|B5Z0Y3|SYH_ECO5E RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558671|sp|B1XAY9|SYH_ECODH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|254782331|sp|B7MYE9|SYH_ECO81 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|259511946|sp|C4ZX89|SYH_ECOBW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|2781066|pdb|1KMM|A Chain A, Histidyl-Trna Synthetase Complexed With Histidyl-Adenylate
 gi|2781067|pdb|1KMM|B Chain B, Histidyl-Trna Synthetase Complexed With Histidyl-Adenylate
 gi|2781068|pdb|1KMM|C Chain C, Histidyl-Trna Synthetase Complexed With Histidyl-Adenylate
 gi|2781069|pdb|1KMM|D Chain D, Histidyl-Trna Synthetase Complexed With Histidyl-Adenylate
 gi|2781070|pdb|1KMN|A Chain A, Histidyl-Trna Synthetase Complexed With Histidinol And Atp
 gi|2781071|pdb|1KMN|B Chain B, Histidyl-Trna Synthetase Complexed With Histidinol And Atp
 gi|2781072|pdb|1KMN|C Chain C, Histidyl-Trna Synthetase Complexed With Histidinol And Atp
 gi|2781073|pdb|1KMN|D Chain D, Histidyl-Trna Synthetase Complexed With Histidinol And Atp
 gi|12516905|gb|AAG57624.1|AE005480_11 histidine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|26109284|gb|AAN81486.1|AE016764_168 Histidyl-tRNA synthetase [Escherichia coli CFT073]
 gi|146372|gb|AAA03226.1| histidine-tRNA synthetase [Escherichia coli]
 gi|1788861|gb|AAC75567.1| histidyl tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|1805574|dbj|BAA16401.1| histidyl tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|13362846|dbj|BAB36799.1| histidine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|91073414|gb|ABE08295.1| histidine tRNA synthetase [Escherichia coli UTI89]
 gi|110344271|gb|ABG70508.1| histidyl-tRNA synthetase [Escherichia coli 536]
 gi|115513867|gb|ABJ01942.1| histidyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|157067669|gb|ABV06924.1| histidyl-tRNA synthetase [Escherichia coli HS]
 gi|157077232|gb|ABV16940.1| histidyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169754131|gb|ACA76830.1| histidyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169889959|gb|ACB03666.1| histidyl tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170519821|gb|ACB17999.1| histidyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187770705|gb|EDU34549.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188017124|gb|EDU55246.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188488902|gb|EDU64005.1| histidyl-tRNA synthetase [Escherichia coli 53638]
 gi|189003447|gb|EDU72433.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189356659|gb|EDU75078.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189362191|gb|EDU80610.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189368474|gb|EDU86890.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189372265|gb|EDU90681.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189378621|gb|EDU97037.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|190902286|gb|EDV62026.1| histidyl-tRNA synthetase [Escherichia coli B7A]
 gi|190907094|gb|EDV66694.1| histidyl-tRNA synthetase [Escherichia coli F11]
 gi|192929310|gb|EDV82919.1| histidyl-tRNA synthetase [Escherichia coli E22]
 gi|192958389|gb|EDV88829.1| histidyl-tRNA synthetase [Escherichia coli E110019]
 gi|194414700|gb|EDX30972.1| histidyl-tRNA synthetase [Escherichia coli B171]
 gi|194423382|gb|EDX39373.1| histidyl-tRNA synthetase [Escherichia coli 101-1]
 gi|208728409|gb|EDZ78010.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208734690|gb|EDZ83377.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208739907|gb|EDZ87589.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209159487|gb|ACI36920.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209763388|gb|ACI80006.1| histidine tRNA synthetase [Escherichia coli]
 gi|209763390|gb|ACI80007.1| histidine tRNA synthetase [Escherichia coli]
 gi|209763392|gb|ACI80008.1| histidine tRNA synthetase [Escherichia coli]
 gi|209763394|gb|ACI80009.1| histidine tRNA synthetase [Escherichia coli]
 gi|209763396|gb|ACI80010.1| histidine tRNA synthetase [Escherichia coli]
 gi|217319852|gb|EEC28277.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218361807|emb|CAQ99406.1| histidyl tRNA synthetase [Escherichia coli IAI1]
 gi|218366209|emb|CAR03957.1| histidyl tRNA synthetase [Escherichia coli S88]
 gi|218371010|emb|CAR18838.1| histidyl tRNA synthetase [Escherichia coli IAI39]
 gi|218428198|emb|CAR09115.2| histidyl tRNA synthetase [Escherichia coli ED1a]
 gi|222034225|emb|CAP76966.1| Histidyl-tRNA synthetase [Escherichia coli LF82]
 gi|226901390|gb|EEH87649.1| histidyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227835899|gb|EEJ46365.1| histidine--tRNA ligase [Escherichia coli 83972]
 gi|238861425|gb|ACR63423.1| histidyl tRNA synthetase [Escherichia coli BW2952]
 gi|242378112|emb|CAQ32885.1| histidyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253323636|gb|ACT28238.1| histidyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974389|gb|ACT40060.1| histidyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253978556|gb|ACT44226.1| histidyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|254593860|gb|ACT73221.1| histidyl tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|257755257|dbj|BAI26759.1| histidyl tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257760291|dbj|BAI31788.1| histidyl tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257765559|dbj|BAI37054.1| histidyl tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|260448406|gb|ACX38828.1| histidyl-tRNA synthetase [Escherichia coli DH1]
 gi|284922464|emb|CBG35551.1| histidyl-tRNA synthetase [Escherichia coli 042]
 gi|290763608|gb|ADD57569.1| Histidyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|291433427|gb|EFF06406.1| histidyl-tRNA synthetase [Escherichia coli B185]
 gi|291471396|gb|EFF13880.1| histidyl-tRNA synthetase [Escherichia coli B354]
 gi|294493901|gb|ADE92657.1| histidyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|299881273|gb|EFI89484.1| histidyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300300933|gb|EFJ57318.1| histidyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300304049|gb|EFJ58569.1| histidyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300396415|gb|EFJ79953.1| histidyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300403744|gb|EFJ87282.1| histidyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300408871|gb|EFJ92409.1| histidyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300416893|gb|EFK00204.1| histidyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300454931|gb|EFK18424.1| histidyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300461960|gb|EFK25453.1| histidyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300526569|gb|EFK47638.1| histidyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300529704|gb|EFK50766.1| histidyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300841806|gb|EFK69566.1| histidyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300843624|gb|EFK71384.1| histidyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|305851810|gb|EFM52262.1| histidyl-tRNA synthetase [Escherichia coli NC101]
 gi|306907414|gb|EFN37918.1| histidyl-tRNA synthetase [Escherichia coli W]
 gi|307554537|gb|ADN47312.1| histidyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307625930|gb|ADN70234.1| histidyl-tRNA synthetase [Escherichia coli UM146]
 gi|308121895|gb|EFO59157.1| histidyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|309702846|emb|CBJ02177.1| histidyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|312947091|gb|ADR27918.1| histidyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315061833|gb|ADT76160.1| histidyl tRNA synthetase [Escherichia coli W]
 gi|315137138|dbj|BAJ44297.1| histidyl-tRNA synthetase [Escherichia coli DH1]
 gi|315256534|gb|EFU36502.1| histidyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|315288066|gb|EFU47466.1| histidyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315292446|gb|EFU51798.1| histidyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315300479|gb|EFU59708.1| histidyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|315615773|gb|EFU96405.1| histidyl-tRNA synthetase [Escherichia coli 3431]
 gi|320180504|gb|EFW55435.1| Histidyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320188847|gb|EFW63506.1| Histidyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320196351|gb|EFW70975.1| Histidyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320640858|gb|EFX10346.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320646301|gb|EFX15228.1| histidyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320651806|gb|EFX20186.1| histidyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320657192|gb|EFX25001.1| histidyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320667602|gb|EFX34517.1| histidyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323159384|gb|EFZ45369.1| histidyl-tRNA synthetase [Escherichia coli E128010]
 gi|323177362|gb|EFZ62950.1| histidyl-tRNA synthetase [Escherichia coli 1180]
 gi|323377586|gb|ADX49854.1| histidyl-tRNA synthetase [Escherichia coli KO11]
 gi|323936407|gb|EGB32697.1| histidyl-tRNA synthetase [Escherichia coli E1520]
 gi|323941224|gb|EGB37409.1| histidyl-tRNA synthetase [Escherichia coli E482]
 gi|323949174|gb|EGB45065.1| histidyl-tRNA synthetase [Escherichia coli H252]
 gi|323955755|gb|EGB51513.1| histidyl-tRNA synthetase [Escherichia coli H263]
 gi|323961330|gb|EGB56942.1| histidyl-tRNA synthetase [Escherichia coli H489]
 gi|323967962|gb|EGB63374.1| histidyl-tRNA synthetase [Escherichia coli M863]
 gi|323971073|gb|EGB66321.1| histidyl-tRNA synthetase [Escherichia coli TA007]
 gi|323977303|gb|EGB72389.1| histidyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324008522|gb|EGB77741.1| histidyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324011229|gb|EGB80448.1| histidyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324118142|gb|EGC12039.1| histidyl-tRNA synthetase [Escherichia coli E1167]
 gi|326340312|gb|EGD64116.1| Histidyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326344996|gb|EGD68740.1| Histidyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|327252221|gb|EGE63893.1| histidyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|331054324|gb|EGI26351.1| histidine--tRNA ligase [Escherichia coli TA206]
 gi|331059876|gb|EGI31853.1| histidine--tRNA ligase [Escherichia coli TA143]
 gi|331074965|gb|EGI46285.1| histidine--tRNA ligase [Escherichia coli H591]
 gi|331079114|gb|EGI50316.1| histidine--tRNA ligase [Escherichia coli H299]
 gi|332087961|gb|EGI93086.1| histidyl-tRNA synthetase [Shigella boydii 5216-82]
 gi|332344386|gb|AEE57720.1| histidyl-tRNA synthetase HisS [Escherichia coli UMNK88]
          Length = 424

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|218696141|ref|YP_002403808.1| histidyl-tRNA synthetase [Escherichia coli 55989]
 gi|254782330|sp|B7LCQ4|SYH_ECO55 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|218352873|emb|CAU98672.1| histidyl tRNA synthetase [Escherichia coli 55989]
          Length = 424

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFTRADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|229019625|ref|ZP_04176437.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229025865|ref|ZP_04182261.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228735417|gb|EEL86016.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228741673|gb|EEL91861.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 476

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGSVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMSTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKIAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR N     + G  E  +G++ +KD+A G +    +    S+   +
Sbjct: 427 SADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAEK 474


>gi|301648269|ref|ZP_07248012.1| histidyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|307139149|ref|ZP_07498505.1| histidyl-tRNA synthetase [Escherichia coli H736]
 gi|331643134|ref|ZP_08344269.1| histidine--tRNA ligase [Escherichia coli H736]
 gi|301073656|gb|EFK88462.1| histidyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|331039932|gb|EGI12152.1| histidine--tRNA ligase [Escherichia coli H736]
          Length = 424

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVKQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|311031528|ref|ZP_07709618.1| histidyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 426

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 98/469 (20%), Positives = 184/469 (39%), Gaps = 49/469 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     +     I    + I E Y +  I TP+ E ++   + + D  D 
Sbjct: 1   MAIQIPRGTQDILPGTVEKWQYIEAKAKEICELYNYKEIRTPIFESTELFLRGVGDTTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA +AR    N    +   P + Y IG +FR E+   G
Sbjct: 61  VQKEMYTFEDRGGRSLTLRPEGTAAVARSYVNNKMFGSPTQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           RFRQF+Q  ++ +GS+  + DAE+  +  +  +++G+      I     K          
Sbjct: 121 RFRQFVQFGIEALGSNDPSIDAEVIALAVELYKSLGLNNLKVVINSLGDKESRQAHRDAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           ++      +  I     D   +     +++L  +   D+    T            ++ +
Sbjct: 181 INH----FQPRINEFCGDCQGRLEKNPLRILDCKKDRDHELMAT---------APSILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ + +    ++   +                            + +I   +VRGL+YY 
Sbjct: 228 LNEESKAYFDKVVAYLSAL-----------------------GIQYEIDPNLVRGLDYYY 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                ++ GGGRY+GLV    G   P  GF++ I RLI A++
Sbjct: 265 HTAFEIMSTSEGF------GAITTLCGGGRYNGLVQEIGGPETPGIGFALSIERLISAME 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +             +    +     +          LR AGI AE      K    Q K 
Sbjct: 319 AENV---KFPFEDSIDCYVVALGDKAKETAVKLLFDLRKAGIVAEKDY-QDKKMKAQFKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ADR      I+ G  E  +G++ IK++  G++     ++  ++  A+ +
Sbjct: 375 ADRLQAKYTIVFGDDELEKGVVSIKEMETGEQQEVAFEDAVAFITAKKS 423


>gi|218706017|ref|YP_002413536.1| histidyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293405955|ref|ZP_06649947.1| histidyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298381756|ref|ZP_06991355.1| histidyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300898382|ref|ZP_07116725.1| histidyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|226737073|sp|B7N6A2|SYH_ECOLU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|218433114|emb|CAR14011.1| histidyl tRNA synthetase [Escherichia coli UMN026]
 gi|291428163|gb|EFF01190.1| histidyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298279198|gb|EFI20712.1| histidyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300357922|gb|EFJ73792.1| histidyl-tRNA synthetase [Escherichia coli MS 198-1]
          Length = 424

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 188/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               ++  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPVLGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|228917037|ref|ZP_04080597.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228842644|gb|EEM87732.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 476

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 184/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +   ++G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRSMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLAVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 427 SADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 474


>gi|300920669|ref|ZP_07137080.1| histidyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300412350|gb|EFJ95660.1| histidyl-tRNA synthetase [Escherichia coli MS 115-1]
          Length = 424

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGIFEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVTFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|229180680|ref|ZP_04308020.1| Histidyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|228602825|gb|EEK60306.1| Histidyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 462

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 39  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 98

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 99  IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 158

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 159 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 214

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 215 HRDALIAHFEPRIDEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 265

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 266 YLNEDSAVYYEKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 302

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 303 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 356

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 357 KAENIELPLEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 412

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 413 SADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 460


>gi|237732493|ref|ZP_04562974.1| histidyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226908032|gb|EEH93950.1| histidyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 424

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 107/476 (22%), Positives = 189/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G      DAE+ M+ A    A+GI ++     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGVEVFGLQGPDIDAELIMLTARWWRALGISQHVSLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAYLELHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  D  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDDDSREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTSS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++            V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFNADPVVDIYLVASGADTQSAAMTLAERLRDEVPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|148231871|ref|NP_001091602.1| probable histidyl-tRNA synthetase, mitochondrial precursor [Bos
           taurus]
 gi|193806520|sp|A5D7V9|SYHM_BOVIN RecName: Full=Probable histidyl-tRNA synthetase, mitochondrial;
           AltName: Full=Histidine--tRNA ligase; Short=HisRS;
           Flags: Precursor
 gi|146186863|gb|AAI40700.1| DTD1 protein [Bos taurus]
          Length = 506

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 123/496 (24%), Positives = 222/496 (44%), Gaps = 48/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+    + P+G  D   +++ +R +ILD + + ++ +G   ++TP  E  + L +   ++
Sbjct: 52  KSNFTIKTPKGTRDLSPQQMVVREKILDVVVSCFKRHGAKGLDTPAFELKEILTEKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ L+D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E     
Sbjct: 112 ---SGLIYDLKDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPTIV 165

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G+   D+ I +++R+ILDGI   
Sbjct: 166 QGRYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSGLHLGDFLIKVSDRRILDGIFAV 224

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  ++DKLDK   + V+            +      L  E  D + 
Sbjct: 225 CGVPES----KFHAICSSVDKLDKISWKDVR-----------HEMVVKKGLAPEVADRIG 269

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +       +G  +L ++ E +   G    ++    ++ RG
Sbjct: 270 DYVQCHGGISLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGVAE-KVSFDLSLARG 328

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGIS 356
           L+YYTG +YEA+L    ++ +++P+  GSV  GGRYDGL  +   +G  VP  G SIG+ 
Sbjct: 329 LDYYTGVIYEAVLLQTPVHAEEEPLNMGSVAAGGRYDGLVGMFDPRGHKVPCVGLSIGVE 388

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    +           +       + L +       L  AGI+AE+   ++  
Sbjct: 389 RIFSIVEQRIKTFGEKIRTTETQVFVATPQKNFLQERLKLIAELWDAGIKAELMYKNNPK 448

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y +    PL +I G  E   G+++++ +A  +E++                  I
Sbjct: 449 LLPQLHYCENMGIPLVVIIGEQELKEGVIKLRSVASREEVA------------------I 490

Query: 477 PISELVSTVKKILQEN 492
               LV+ ++K L E+
Sbjct: 491 KRENLVAEIQKRLSES 506


>gi|296485230|gb|DAA27345.1| probable histidyl-tRNA synthetase, mitochondrial precursor [Bos
           taurus]
          Length = 506

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 123/496 (24%), Positives = 222/496 (44%), Gaps = 48/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+    + P+G  D   +++ +R +ILD + + ++ +G   ++TP  E  + L +   ++
Sbjct: 52  KSNFTIKTPKGTRDLSPQQMVVREKILDVVVSCFKRHGAKGLDTPAFELKEILTEKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ L+D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E     
Sbjct: 112 ---SGLIYDLKDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPTIV 165

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G+   D+ I +++R+ILDGI   
Sbjct: 166 QGRYREFYQCDFDIAGQFD-PMIPDAECLKIMCEILSGLHLGDFLIKVSDRRILDGIFAV 224

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  ++DKLDK   + V+            +      L  E  D + 
Sbjct: 225 CGVPES----KFHAICSSVDKLDKISWKDVR-----------HEMVVKKGLAPEVADRIG 269

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +       +G  +L ++ E +   G    ++    ++ RG
Sbjct: 270 DYVQCHGGISLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGVAE-KVSFDLSLARG 328

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGIS 356
           L+YYTG +YEA+L    ++ +++P+  GSV  GGRYDGL  +   +G  VP  G SIG+ 
Sbjct: 329 LDYYTGVIYEAVLLQTPVHAEEEPLNMGSVAAGGRYDGLVGMFDPRGHKVPCVGLSIGVE 388

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    +           +       + L +       L  AGI+AE+   ++  
Sbjct: 389 RIFSIVEQRIKTFGEKIRTTETQVFVATPQKNFLQERLKLIAELWDAGIKAELMYKNNPK 448

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y +    PL +I G  E   G+++++ +A  +E++                  I
Sbjct: 449 LLPQLHYCENMGIPLVVIIGEQELKEGVIKLRSVASREEVA------------------I 490

Query: 477 PISELVSTVKKILQEN 492
               LV+ ++K L E+
Sbjct: 491 KRENLVAEIQKRLSES 506


>gi|270006157|gb|EFA02605.1| hypothetical protein TcasGA2_TC008324 [Tribolium castaneum]
          Length = 605

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 120/494 (24%), Positives = 224/494 (45%), Gaps = 46/494 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   + P+G  D   +++ +RN +LD I ++++ +G + I+TP+ E  + L     ++
Sbjct: 147 PQKFTLKTPKGTRDFSPEQMALRNTVLDKIISVFKKHGAETIDTPIFELKEVLTGKYGED 206

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 207 ---SKLIYDLKDQGGEILSLRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPSIARG 262

Query: 124 RFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           R+R+F QCD D          D E   ++ + L+ +G+  + + I +N+R +LDG+ E  
Sbjct: 263 RYREFYQCDFDIAGAYDPMIPDTECVKIVYEILKVLGM--DQFTIKLNHRLLLDGLFEAC 320

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+  D    +   +  A+DKLDK     VK  + E              L     D++  
Sbjct: 321 GVPKD----KFRSICSAVDKLDKSPWSEVKKEMVEE-----------KGLEESVADLIGE 365

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS--NRIKISSTIVRGLE 300
           ++ ++ ++ + E     +  +  +     L  I  ++    + +  ++I    ++ RGL+
Sbjct: 366 YVQLNGQEDLVEKLLKDERLLKSKLAVEGLEAIKLILHYCAFYNISDKISFDLSLARGLD 425

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG--LVSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L      + +     GS+ GGGRYD    +   K + VP  G SIGI R+
Sbjct: 426 YYTGIIYEAVLAGDAGGDSEF--SVGSIAGGGRYDNLVSMFDSKHKQVPCVGVSIGIERI 483

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              L++  ++ N       V +       + + +       L   G + E     +    
Sbjct: 484 FAVLEAKYAAANKKIRTTEVQVYVASAQKNLVEERMKLCNHLWDEGFKVEHSYKKNPKLL 543

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            QL++ +    PLA+I G  E  RG+++++++    E+                   +P 
Sbjct: 544 VQLQHCEEYGIPLAVILGESEIQRGVVKLREVKSRNEV------------------EVPR 585

Query: 479 SELVSTVKKILQEN 492
           ++L   ++K+LQ++
Sbjct: 586 TQLADEIRKMLQKS 599


>gi|218291280|ref|ZP_03495256.1| histidyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218238828|gb|EED06040.1| histidyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 420

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 94/470 (20%), Positives = 183/470 (38%), Gaps = 61/470 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D     +     +   +R+++E   ++ I TP+ E+++   + + +  D 
Sbjct: 1   MEIRRPRGTQDILPGAVEAWQALEAVVRDVFERANYEEIRTPIFEHTELFERGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
            +K +++  D  G+ ++LR + TA + R   EN         + Y +GP+FR EK   GR
Sbjct: 61  VSKEMYTFLDRGGRSVTLRPEGTAGVVRAYVENKLYGQGSLTKVYYLGPMFRYEKPQRGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH-----IGINNRKILDGIL 179
            RQ  Q  V+ +GS     DAE+  +    L+ +G++            +   +  + ++
Sbjct: 121 LRQLHQVGVEVLGSELPAIDAEVIELGYSILKRLGMRDMTVELNSVGCSVCRPRHREKMI 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E++  + ++            D   +     ++L        +  + +    L    +  
Sbjct: 181 ERLLPYREEL---------CGDCQVRLEKNPLRLF-------DCKNESCQQVLREANVPY 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +V  L  D  K +  +   ++                             ++  ++VRGL
Sbjct: 225 IVDELCDDCRKHLDAVEGYLRA-----------------------MDVPYRLEKSLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT   +E  +             F +V GGGRY+ LV+   G +VP  GF+ G+ R+I
Sbjct: 262 DYYTRTAWEITVP-----------NFSTVLGGGRYNRLVAELGGPDVPGIGFAAGMDRVI 310

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L++   S    + +          D  +          LR  G+R +      ++  +
Sbjct: 311 AVLEAQGVSLGERQPLDA---FICVADETAEHTAMAVLTSLRRLGVRCDRDY-QGRSLKS 366

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           Q K ADR     A++ G  E ++G   +K LA G++              
Sbjct: 367 QFKQADRLGAKFAVVIGESELAKGAATVKHLATGEQRDVPFGQLADRIRE 416


>gi|47566592|ref|ZP_00237414.1| histidyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47556622|gb|EAL14954.1| histidyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 423

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 105/467 (22%), Positives = 183/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          M       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPIEHSMDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 375 ADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 421


>gi|260887819|ref|ZP_05899082.1| histidine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260862425|gb|EEX76925.1| histidine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 421

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 93/463 (20%), Positives = 177/463 (38%), Gaps = 58/463 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D     +     +   IR +   YG+  I TP+ E+++   + + +  D 
Sbjct: 1   MLINGPRGTKDILPDTVAQWTHVEKVIRELCARYGYREIRTPIFEHTELFLRGIGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K +++  D   + ++LR + TA + R   +N         + + IG +FR ++   GR
Sbjct: 61  VEKEMYTFTDRGERSLTLRPENTASVVRSYLQNKLYAADALVKLFYIGSMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH----IGINNRKILDGILE 180
           +R+F Q  V+ +G      DAE+ ++  + L A+G++    H         R +    L+
Sbjct: 121 YREFHQFGVEALGEENPAVDAEIIVLAVEFLRALGLQELKLHLNSVGCPKCRPVYRERLQ 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      ++L          D   +F    ++  L + + ++     +GA         +
Sbjct: 181 EFFRPHLEEL--------CTDCRSRFERNPLR--LLDCKNEHCHALAEGA-------PRI 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L  +      E+   +       +    L                       VRGL+
Sbjct: 224 TDCLCDECRVHFTEVQSYLTAAGIPFELDANL-----------------------VRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E                  +V GGGRYDGLV    G   P  GF++G+ R+++
Sbjct: 261 YYTKTAFEVKYT--------PLGAQSAVAGGGRYDGLVEEVGGPPTPGIGFAVGLERVLL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  E     ++    V +  +     +          LR A + A M   + ++   Q
Sbjct: 313 ALEKQELLPEELEA---VDVFVVALGEAAQIPAFKLLHELRAAKLSAAMDF-AGRSMKAQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +K A+++N     I G  E       +KD+   ++    +K+ 
Sbjct: 369 MKQANKKNARFVAILGEDEVKEASALLKDMKTSEQKKLALKDF 411


>gi|229071912|ref|ZP_04205123.1| Histidyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228711208|gb|EEL63172.1| Histidyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 423

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 183/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPLEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 375 ADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEQ 421


>gi|65321770|ref|ZP_00394729.1| COG0124: Histidyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|167636503|ref|ZP_02394800.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688654|ref|ZP_02879859.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|177653972|ref|ZP_02936013.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190566891|ref|ZP_03019807.1| histidyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196034468|ref|ZP_03101877.1| histidyl-tRNA synthetase [Bacillus cereus W]
 gi|227817182|ref|YP_002817191.1| histidyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228929448|ref|ZP_04092469.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935724|ref|ZP_04098537.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948117|ref|ZP_04110401.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229093474|ref|ZP_04224577.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|229123944|ref|ZP_04253136.1| Histidyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|229604899|ref|YP_002868690.1| histidine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254684159|ref|ZP_05148019.1| histidyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254736506|ref|ZP_05194212.1| histidyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741544|ref|ZP_05199231.1| histidyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254751357|ref|ZP_05203394.1| histidyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757689|ref|ZP_05209716.1| histidyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|167528096|gb|EDR90893.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667340|gb|EDT18098.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172081027|gb|EDT66105.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190561882|gb|EDV15851.1| histidyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195993010|gb|EDX56969.1| histidyl-tRNA synthetase [Bacillus cereus W]
 gi|227006448|gb|ACP16191.1| histidine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228659246|gb|EEL14894.1| Histidyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228689945|gb|EEL43749.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|228811475|gb|EEM57812.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823962|gb|EEM69781.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830236|gb|EEM75852.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229269307|gb|ACQ50944.1| histidine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 476

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLAVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 427 SADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 474


>gi|323188368|gb|EFZ73660.1| histidyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 424

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 186/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A     +GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRVLGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|317049135|ref|YP_004116783.1| histidyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950752|gb|ADU70227.1| histidyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 424

 Score =  270 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 111/502 (22%), Positives = 187/502 (37%), Gaps = 90/502 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAIWQRIEGTLKQVLASYGYSEIRLPIVEQTPLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G+ ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ MM A   +A+G                   N
Sbjct: 117 PQKGRYRQFHQMGAEVFGLQGPDVDAELIMMTARWWKALGIADHVELELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHKDVLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  FL  D       L  L+       +    L                  
Sbjct: 216 QQLLNDAPTLGDFLDEDSRAHFSGLCALLDDAGIQYRINQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTSA--------LGSQGTVCGGGRYDGLVEQLGGRPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAE 408
           F++G+ RL++ ++++       +    V +  +       S      + LR A   ++  
Sbjct: 305 FAMGMERLVLLVQAVN---PEFEPTRIVDVYVIASGQGVQSAAMQLAEKLRDADPQLKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + IKDL  G +             
Sbjct: 362 TNFGGG-NFKKQFARADKWGARIALVLGEDEVATGQVVIKDLRTGDQ------------- 407

Query: 469 ARVAQITIPISELVSTVKKILQ 490
                 T+  SE  +T++ +LQ
Sbjct: 408 -----QTLAQSEAAATLRTLLQ 424


>gi|228954688|ref|ZP_04116711.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228805015|gb|EEM51611.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 423

 Score =  270 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 184/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                          +   +    +VRGL+YY 
Sbjct: 228 LNEDSAIYYDKVQELLT-----------------------MMNVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPLEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 375 ADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 421


>gi|82777899|ref|YP_404248.1| histidyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|309784735|ref|ZP_07679368.1| histidyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|123755716|sp|Q32D48|SYH_SHIDS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|81242047|gb|ABB62757.1| histidine tRNA synthetase [Shigella dysenteriae Sd197]
 gi|308927105|gb|EFP72579.1| histidyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 424

 Score =  270 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 186/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPSETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+          + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQHLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTSPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|229098875|ref|ZP_04229811.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
 gi|229105038|ref|ZP_04235691.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|229117900|ref|ZP_04247262.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228665557|gb|EEL21037.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228678377|gb|EEL32601.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228684548|gb|EEL38490.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
          Length = 476

 Score =  270 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR N     + G  E  +G++ +KD+A G +    +    S+   +
Sbjct: 427 SADRLNAKFVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAEK 474


>gi|254455303|ref|ZP_05068732.1| histidyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082305|gb|EDZ59731.1| histidyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 464

 Score =  270 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 180/495 (36%), Positives = 280/495 (56%), Gaps = 37/495 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+ KL   LP GF D   K++ ++ ++L +I N +  +G D +ETP  E S+++G FL
Sbjct: 1   MNKENKLVPGLPSGFEDRWDKKLLLKKKLLKAIENNFIKFGADALETPSFEISENIGSFL 60

Query: 61  PDED-RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            ++D  P   +FS QD   + I+LRYDL++PLAR+VA+N   +    + Y I  VFRNEK
Sbjct: 61  AEDDSNPMSDIFSFQD-GEKSITLRYDLSSPLARFVAQNNQELPSIYKRYAIQNVFRNEK 119

Query: 120 HGPGRFRQFIQCDVDNVGSSAE-TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
            G GR+R+F+Q D D VG+     A+AE+C +++ TL   G+ ++ + I ++NRKI+ G+
Sbjct: 120 AGNGRYREFMQADFDIVGNVNPAQANAELCNLISSTLSDCGLNKDQFTINVSNRKIVQGL 179

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDK--FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           + ++ +  + ++     V+RAIDKLDK  FGL+GV+ LL + R D SG  TKGA+L+ +Q
Sbjct: 180 INELKISEEKQI----KVIRAIDKLDKPGFGLKGVEDLLKKERKDQSGAITKGADLSGDQ 235

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +++FL I   K + E  +        ++G  EL  + E++   G N N++K + TIV
Sbjct: 236 AQQILNFLKIKDLKKLKETLK----NPLSQEGIKELEDVFEVL-GYGSNLNQVKTNFTIV 290

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL YY+  + E  L F V N K K V  GS+  GG Y  L+SRF+G ++P TG S G+ 
Sbjct: 291 RGLAYYSDFIVETNLNFKVTNNKGKEVDIGSICSGGAYAKLISRFRGVDIPGTGISFGVD 350

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+ AL  L+      ++     +     D   L  Y     +LR   I AE+FL + KN
Sbjct: 351 RLLFALMQLDQIKVEDQKP----VLVCVMDQKYLKNYYELADLLRDNNINAEVFLNTKKN 406

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA--KGKELSREIKNNESWREARVAQI 474
            G QL  A++R   +A+I G  E +   + IK+L   KG+                    
Sbjct: 407 LGKQLDLANKRQLTIAVICGENEFNDNTVTIKNLKGVKGE-----------------NNQ 449

Query: 475 TIPISELVSTVKKIL 489
           TIP ++L++ +KK++
Sbjct: 450 TIPKADLINEIKKLI 464


>gi|300951781|ref|ZP_07165596.1| histidyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300958856|ref|ZP_07170964.1| histidyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300314508|gb|EFJ64292.1| histidyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300448978|gb|EFK12598.1| histidyl-tRNA synthetase [Escherichia coli MS 116-1]
          Length = 424

 Score =  270 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 108/497 (21%), Positives = 194/497 (39%), Gaps = 82/497 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              NF  Q   AD+    +A++ G  E + G+  +KDL  G++ +               
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGIAVVKDLRSGEQTA--------------- 409

Query: 473 QITIPISELVSTVKKIL 489
              +    +V+ ++ +L
Sbjct: 410 ---VAQDSVVAHLRTLL 423


>gi|229163352|ref|ZP_04291304.1| Histidyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228620133|gb|EEK77007.1| Histidyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 423

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 105/467 (22%), Positives = 183/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMSTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR N     + G  E  +G++ +KD+A G +    +    S+   +
Sbjct: 375 ADRLNAKFVAVLGEDELDKGVINLKDMATGGQEEVALDVFASYVAEK 421


>gi|256017338|ref|ZP_05431203.1| histidyl-tRNA synthetase [Shigella sp. D9]
 gi|332278333|ref|ZP_08390746.1| histidyl-tRNA synthetase [Shigella sp. D9]
 gi|332100685|gb|EGJ04031.1| histidyl-tRNA synthetase [Shigella sp. D9]
          Length = 424

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 186/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYD LV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDCLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|30022479|ref|NP_834110.1| histidyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218233653|ref|YP_002369213.1| histidyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229048113|ref|ZP_04193684.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|229111876|ref|ZP_04241422.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|229129684|ref|ZP_04258652.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|229146975|ref|ZP_04275337.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|229152607|ref|ZP_04280796.1| Histidyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|296504896|ref|YP_003666596.1| histidyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|39932340|sp|Q817X7|SYH2_BACCR RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|29898037|gb|AAP11311.1| Histidyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218161610|gb|ACK61602.1| histidine--tRNA ligase [Bacillus cereus B4264]
 gi|228630868|gb|EEK87508.1| Histidyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|228636472|gb|EEK92940.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|228653801|gb|EEL09671.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|228671632|gb|EEL26930.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228723216|gb|EEL74590.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|296325948|gb|ADH08876.1| histidyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 423

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 183/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPLEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 375 ADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 421


>gi|229192615|ref|ZP_04319576.1| Histidyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228590922|gb|EEK48780.1| Histidyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
          Length = 423

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 183/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAIYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPLEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 375 ADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 421


>gi|118479561|ref|YP_896712.1| histidyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196044856|ref|ZP_03112090.1| histidyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225866385|ref|YP_002751763.1| histidyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229186643|ref|ZP_04313804.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|118418786|gb|ABK87205.1| histidyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196024344|gb|EDX63017.1| histidyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225788488|gb|ACO28705.1| histidine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596902|gb|EEK54561.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 476

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYEKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLAVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 427 SADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 474


>gi|323704147|ref|ZP_08115726.1| histidyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323536213|gb|EGB25985.1| histidyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 417

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 105/457 (22%), Positives = 188/457 (41%), Gaps = 50/457 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E      + + IR I  ++GF  I TP  E+++   + + +  D 
Sbjct: 1   MLTKAPRGTKDVLPSEAYKWQYLENMIREICADFGFKEIRTPGFEHTELFLRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+L+ + T+P  R   E+       P + Y I PV+R E+   GR
Sbjct: 61  VRKEMYTFNDKSGRSITLKPEGTSPAVRAFVEHNLYAETMPVKIYYITPVYRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q  ++  GS+   ADAE+  +       +G+K  + +I             +   
Sbjct: 121 LREHHQFGIEMFGSNDALADAEVISVAMTLFNKLGLKNLELNINSIGCPNCR---REYNK 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              + L E +  L   D  +++ +  +++L  +          +      +   +M+++L
Sbjct: 178 ALKEFLGENIENL-CDDCKERYKINPMRVLDCK---------VESCKRILKDAPLMLNYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +     L   +K                              I+  IVRGL+YYT 
Sbjct: 228 CDDCKNHFESLQSYLKEA-----------------------GFNFIINPKIVRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E I               G+V GGGRYDGLV    G +VP  GF +G+ RL++ L++
Sbjct: 265 TAFEIISND--------IGAQGTVCGGGRYDGLVEECGGPSVPGVGFGLGLERLLLTLEN 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                   K      +      +++          LR+ GI  E+     ++   Q+KYA
Sbjct: 317 SGIEIPAPKRPD---LFICTIGNEAKKYAFSMATKLRSLGISVEID-NMGRSLKAQMKYA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ N    II G  E   G +++K++  G+E + E+ 
Sbjct: 373 NKLNVRYTIILGEDELKNGKVKMKNMDTGEESAIELD 409


>gi|283786130|ref|YP_003365995.1| histidyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282949584|emb|CBG89202.1| histidyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 424

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 107/484 (22%), Positives = 184/484 (38%), Gaps = 72/484 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEAFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSQEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHVDKLDE------------DCKRRMYSNPLRVLDSKN---------PQV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D  +    L  L++           L                  
Sbjct: 216 QALLNDAPQLGDYLDDDSREHFAGLCRLLEAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTSS--------LGSQGTVCAGGRYDGLVEQLGGRPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   +D+ S      + LR    G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFTADPVVDIYLVASGADTQSAAMTLAERLRDELPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVLGESEVAAGTVVVKDLRSGEQTAVAQDSVATHLR 420

Query: 469 ARVA 472
             +A
Sbjct: 421 TLMA 424


>gi|206969773|ref|ZP_03230727.1| histidyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206735461|gb|EDZ52629.1| histidyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 423

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 182/467 (38%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIDEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAVYYEKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E        ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEADGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPLEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 375 ADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 421


>gi|194432032|ref|ZP_03064321.1| histidyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194419561|gb|EDX35641.1| histidyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|332089679|gb|EGI94780.1| histidyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 424

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETTIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|313608679|gb|EFR84516.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 427

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 105/472 (22%), Positives = 190/472 (40%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+ ENY ++ I TP+ E+++   + + D  D 
Sbjct: 3   MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENYQYEEIRTPVFEHTELFERGVGDSTDI 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 63  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 122

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +     + +G+      I     K       E +
Sbjct: 123 RQRQFTQMGIEALGSDDPSIDVEVISLAMTFFKKIGLTNIKLVINSLGDKESRLKHREAL 182

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 183 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       +   +                              +I  T+VRGL+YY
Sbjct: 229 FLNEESVAYFENVKNYLNALE-----------------------IPFEIDPTMVRGLDYY 265

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 266 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLAL 319

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 320 EKADI---EIPSKKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLK 375

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R+N    II G  E   G  Q+K++  G++ +               + 
Sbjct: 376 DANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLTNTKGEK 427


>gi|42783532|ref|NP_980779.1| histidyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206975990|ref|ZP_03236900.1| histidyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961893|ref|YP_002340463.1| histidyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097847|ref|YP_002531904.1| histidyl-tRNA synthetase [Bacillus cereus Q1]
 gi|54039678|sp|P62370|SYH2_BACC1 RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|42739461|gb|AAS43387.1| histidyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206745742|gb|EDZ57139.1| histidyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217063931|gb|ACJ78181.1| histidyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241905|gb|ACM14615.1| histidyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 423

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 183/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAVYYEKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 375 ADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 421


>gi|228941572|ref|ZP_04104120.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974501|ref|ZP_04135068.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981095|ref|ZP_04141396.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228778636|gb|EEM26902.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228785218|gb|EEM33230.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818079|gb|EEM64156.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942185|gb|AEA18081.1| histidyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 423

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 183/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMATA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPLEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 375 ADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 421


>gi|258512005|ref|YP_003185439.1| histidyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478731|gb|ACV59050.1| histidyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 420

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 96/469 (20%), Positives = 180/469 (38%), Gaps = 59/469 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D     +     +   +R+++E   ++ I TP+ E+++   + + +  D 
Sbjct: 1   MEIRRPRGTQDILPGAVEAWQALEAVVRDVFERANYEEIRTPIFEHTELFERGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
            +K +++  D  G+ ++LR + TA + R   EN         + Y +GP+FR EK   GR
Sbjct: 61  VSKEMYTFLDRGGRSVTLRPEGTAGVVRAYVENKLYGQGSLTKVYYLGPMFRYEKPQRGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILE 180
            RQ  Q  V+ +GS     DAE+  +    L+ VG++      +       R      + 
Sbjct: 121 LRQLHQVGVEVLGSELPAIDAEVIELGYSLLKKVGMRDMTVELNSVGCSVCRPRHREKMI 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +  L   ++L          D   +     ++L        +  + +    L    +  +
Sbjct: 181 QRLLPHKEEL--------CADCQVRLEKNPLRLF-------DCKNESCQQVLREANVPYI 225

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           V  L  D  K +  +   ++                             ++  ++VRGL+
Sbjct: 226 VDELCDDCRKHLDAVEGYLRA-----------------------MDVPYRLEKSLVRGLD 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E  +             F +V GGGRY+ LV+   G +VP  GF+ G+ R++ 
Sbjct: 263 YYTRTAWEITVP-----------NFSTVLGGGRYNRLVAELGGPDVPGIGFAAGMDRVLA 311

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L++   S    + +          D  +          LR  G+R +      ++  +Q
Sbjct: 312 VLEAQGVSLGERQPLDA---FICVADETAEHTAMAVLTSLRRLGVRCDRDY-QGRSLKSQ 367

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            K ADR     A++ G  E ++G   +K LA G++              
Sbjct: 368 FKQADRLGAKFAVVIGESELAKGAATVKHLATGEQRDVPFGQLADRIRE 416


>gi|323156168|gb|EFZ42327.1| histidyl-tRNA synthetase [Escherichia coli EPECa14]
          Length = 424

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTLLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|313623670|gb|EFR93824.1| histidyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 425

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 100/472 (21%), Positives = 189/472 (40%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +  + + + ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLESAFKKVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ +D  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFEDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +  +    +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLTNIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       + + +                              +I  T+VRGL+YY
Sbjct: 227 FLNEESVAYFENVKKYLTALE-----------------------IPFEIDPTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVKEFGGPDTPGIGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E +    K    + +  +    ++  K       LR  GI AE      +    QLK
Sbjct: 318 EKAEINIPETKP---LEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKLKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R+     +I G  E   G  Q+K++  G++ +               + 
Sbjct: 374 DANRKKAIYTVILGEEELQTGNYQLKNMETGEQEAVSETTIIEKLTNTKEEK 425


>gi|297544514|ref|YP_003676816.1| histidyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842289|gb|ADH60805.1| histidyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 418

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 106/465 (22%), Positives = 190/465 (40%), Gaps = 50/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E      + + IR I ++YGF  I TP  E+++   + + +  D 
Sbjct: 1   MLTKAPRGTKDILPSESYKWQYVEELIRKICDDYGFREIRTPGFEHTELFLRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+L+ + T+P  R   E+       P + Y I PV+R E+   GR
Sbjct: 61  VRKEMYTFTDKGGRSITLKPEGTSPAVRAFIEHNLYAEAQPTKLYYITPVYRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q  V+  G+ + +ADAE+  +    L+ +G+   +  I            +    
Sbjct: 121 LREHHQFGVEIFGAKSASADAEVISVAMTLLKKLGLNNLELRINSVGCSACR---KNYNK 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L + L  L   D   ++ +  +++L  +          +     ++   ++  +L
Sbjct: 178 VLKDFLKDNLEYL-CDDCKVRYEINPLRVLDCK---------VESCQRITKDAPLITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +                     EL    +++        RI      VRGL+YYT 
Sbjct: 228 CDDCKNHF-----------------EELQKYLDVMGYDYMIDPRI------VRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E I         +     G+V GGGRYDGL+    G ++P  GF +G+ RL++ L+ 
Sbjct: 265 TAFEII--------SKDIGAQGTVCGGGRYDGLIEECGGPSMPGVGFGMGLERLLITLEQ 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  I +   V +       D+          LR  G++ E      ++   Q+KYA
Sbjct: 317 NGI---EIPKPEGVDLFIAYVGEDAKLFTFALANKLRFNGLKVERD-NMDRSLKAQMKYA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           ++ N   AI+ G  E  +  +++KD+  G E+   I   E   + 
Sbjct: 373 NKLNAKFAIVIGEEEMKKNKVKLKDMRDGSEVEISIDEIEQRIKN 417


>gi|228993141|ref|ZP_04153063.1| Histidyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228766600|gb|EEM15241.1| Histidyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 423

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 184/468 (39%), Gaps = 51/468 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMYGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +    +        E +
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + ++ E        D   +     +++L  +   D+    T            +  
Sbjct: 181 IAHFEPRIGEF-----CSDCQSRLEKNPLRILDCKKDRDHELMST---------APSITE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++ EL+                              +    +VRGL+YY
Sbjct: 227 YLNEESTTYYEKVQELLT-----------------------MMGVPFEKDPNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E        ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 264 QHTVFEI------MSEADGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 318 KAENIELPIEHNIDC---YVVALGDKAKDHAAKIAFDLRKAGLSVEKDY-LDRKMKAQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR N     + G  E  +G++ +KD+A G +    +    S+   +
Sbjct: 374 SADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAEK 421


>gi|284801910|ref|YP_003413775.1| histidyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995052|ref|YP_003416820.1| histidyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|290893879|ref|ZP_06556857.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|284057472|gb|ADB68413.1| histidyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060519|gb|ADB71458.1| histidyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|290556596|gb|EFD90132.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 425

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 105/472 (22%), Positives = 190/472 (40%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+ ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +     + +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDDPSIDVEVISLAMTFFKKIGLTNIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       +   +                              +I  T+VRGL+YY
Sbjct: 227 FLNEESVAYFENVKNYLNALE-----------------------IPFEIDPTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 318 EKADI---EIPAKKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R+N    II G  E   G  Q+K++  G++ +               + 
Sbjct: 374 DANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLSNTKGEK 425


>gi|229135227|ref|ZP_04264026.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228648269|gb|EEL04305.1| Histidyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 476

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 185/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R+I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGSVELWQYIEGQARDICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMSTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +  +       LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDRAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR N     + G  E  +G++ +KD+A G +    +    S+   +
Sbjct: 427 SADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAEK 474


>gi|187733422|ref|YP_001881305.1| histidyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|229558742|sp|B2TXT9|SYH_SHIB3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|187430414|gb|ACD09688.1| histidyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|320175077|gb|EFW50190.1| Histidyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 424

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPIVDIYLVASGADTQSAAMALAERLRDELQGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVTNGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|229013621|ref|ZP_04170752.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228747680|gb|EEL97552.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 476

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 184/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGSVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +  +       LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDRAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR N     + G  E  +G++ +KD+A G +    +    S+   +
Sbjct: 427 SADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAEK 474


>gi|218899572|ref|YP_002447983.1| histidyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228902931|ref|ZP_04067072.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|228960677|ref|ZP_04122321.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228967479|ref|ZP_04128507.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|218545625|gb|ACK98019.1| histidyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228792194|gb|EEM39768.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228798983|gb|EEM45956.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228856715|gb|EEN01234.1| Histidyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 423

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 183/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPLEHSIDC---YVVALGEKAKDHAAKVAFNLRKAGLSVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 375 ADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 421


>gi|292491215|ref|YP_003526654.1| histidyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579810|gb|ADE14267.1| histidyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 421

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 113/482 (23%), Positives = 189/482 (39%), Gaps = 69/482 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    +      + D++RN+  +YG+  I  PLLE ++   + + +  D  
Sbjct: 3   KIQAIRGMNDILPDQTPHWQMVEDTLRNVLASYGYQEIRLPLLEPTELFQRSIGEVTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  ++LR + TA   R V ++      P R +  G +FR+E+   GR+R
Sbjct: 63  EKEMYTFTDRNGDSLTLRPEGTAGCVRSVLQHGLLTQGPQRLWYYGAMFRHERPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+ +G      D E+ +M A     +G+            + L   L  +G   
Sbjct: 123 QFFQIGVEVLGPKGPDVDVELILMTARFWRQLGL------------EGLRLQLNSLGSPA 170

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                   +V    D       +  +  L                   EQ   ++ +L  
Sbjct: 171 ARATYRERLVDFFTDHQ-DCLDEDSRRRLHSNPLRILDSKNPALQEIIEQAPRLLDYLDK 229

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D       L +L+       +    L                       VRGL+YYT  V
Sbjct: 230 DSRDHFEALQDLLDSAGIAYEINPRL-----------------------VRGLDYYTRTV 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          +    G+V  GGR+DGLV +  GQ  PA GF++G+ RLI  L    
Sbjct: 267 FEWV--------SDQLGSQGTVCAGGRFDGLVEQLGGQPTPAVGFALGLERLITLLGEQG 318

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYA 424
                +KE   V +  +     +  +  +  + LR A  G+R ++  G   +F +QLK A
Sbjct: 319 ----CLKEPAIVDLYVVAVGPQAEHQSLLLAEHLREAVPGVRLQVNYGGG-SFKSQLKRA 373

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           DR     A+I G  E  +G + +KDL K                    Q ++P S+L   
Sbjct: 374 DRSGARWALILGEDEVVQGTVSVKDLRK-----------------AQPQQSMPQSKLPDY 416

Query: 485 VK 486
           ++
Sbjct: 417 IR 418


>gi|294101540|ref|YP_003553398.1| histidyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616520|gb|ADE56674.1| histidyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 420

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 96/454 (21%), Positives = 180/454 (39%), Gaps = 52/454 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D   +E    + +L     + +N+G+  +  P+ E+++   + + +  D   
Sbjct: 4   IKAPRGVRDILPEESWKWSYVLKIAAEVAKNFGYSEVHLPVFEHTELFSRGIGETTDVVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D  G+ ++LR + TA + R   EN       P + +  GP+FR E+   GR+R
Sbjct: 64  KEMYTFEDRGGRSLTLRPEATASMVRCYLENKLNSHAQPVKLWCAGPMFRYERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLH 185
           QF Q D +++G+     D E+  +  +    +G++  +  I      +      EK+  +
Sbjct: 124 QFWQLDFESLGTKNPMVDVEVIALSLELYRRLGLQNLEVVINSVGCPECRPAYKEKLKEY 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  E            +F    +++L  + +     + T GA         + + L 
Sbjct: 184 FKPRYEELCKTC-----QSRFERNPLRIL--DCKNPECKEITDGA-------PDIYTSLC 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D      ++ E +    A                          I   +VRGL+YYT  
Sbjct: 230 DDCRCHFDKVQEGLSRIGA-----------------------HYHIDKRLVRGLDYYTKT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            YE +                +V GGGRYD L     G   P+ GF+ G+ R+++ ++  
Sbjct: 267 AYEVL--------SGALGAQNAVCGGGRYDNLAETIGGPFTPSVGFATGLERIVLVMEEQ 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                +      + +  +  D  S  + Q     LR A I  +M     +    Q K AD
Sbjct: 319 N---CSFGPSPDLDVYAIGLDEASREELQKLVAELRQANISTDMDYME-RGMKAQFKSAD 374

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
                 A I G  E + G++ +K+L  G+++  E
Sbjct: 375 ASGAVFACILGGNELANGVVNVKNLKTGEQVEVE 408


>gi|89100799|ref|ZP_01173652.1| histidyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084502|gb|EAR63650.1| histidyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 424

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 101/467 (21%), Positives = 181/467 (38%), Gaps = 51/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E      I    R +   + +  I TP+ E+++   + + D  D 
Sbjct: 1   MAMNIPRGTQDILPGESEKWQYIEGKARELCSRFQYQEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TAP  R   EN        P + Y  GP+FR E+   G
Sbjct: 61  VQKEMYTFEDRGGRSLTLRPEGTAPTVRSFVENKMHGNANQPVKLYYTGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           RFRQF+Q  V+ +GSS    DAE+  +       +G+K+    I    +++  +   E +
Sbjct: 121 RFRQFVQFGVEALGSSDPAIDAEVIALAMSIYTELGLKKLKLVINSLGDKESRNSHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H   ++ E        D  ++     +++L  + + D   +  + A         ++ 
Sbjct: 181 IAHFKPRIGEF-----CSDCQNRLEKNPMRIL--DCKKDREHELMQTA-------PSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ D +K   ++ + +                          S    +   +VRGL+YY
Sbjct: 227 FLNEDSKKYFEKVQQYLAD-----------------------VSIDFTVDPNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +                ++ GGGRY+GL     G   P  GF+  I R + AL
Sbjct: 264 NHTAFEIMSDAEGF------GAITTLCGGGRYNGLTEEIGGPEAPGIGFAFSIERFLSAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++        + +   L+       ++          LR AGI AE      +    Q K
Sbjct: 318 EAEGIKLPVNEGIDCYLV---ALGEEAKDYSVGLLHKLRMAGISAERDY-LDRKIKTQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            ADR N     + G  E   G + +K +  G +    + +     + 
Sbjct: 374 AADRMNAKYVAVLGEDELKAGKINVKSMETGDQTEVSLDSFIDQLKE 420


>gi|332981512|ref|YP_004462953.1| histidyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699190|gb|AEE96131.1| histidyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 420

 Score =  269 bits (688), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 102/462 (22%), Positives = 186/462 (40%), Gaps = 52/462 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D    EI     +   IR+    +G+  I TP+ E+++   + + D  D 
Sbjct: 1   MVINAPRGTKDVLPDEIYKWQYVESFIRHWTALFGYKEIRTPVFEHTELFQRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + I+L+ + TA + R   E+       P + Y + P+FR E+   GR
Sbjct: 61  VQKEMYTFEDKGNRSITLKPEGTAGVVRAYIEHKLYAEAQPIKLYYLSPIFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG-ILEKIG 183
            R+  Q  V++ GS   + DAE+  +    L  +G+K  + HI     K       + + 
Sbjct: 121 LREHHQFGVESFGSYGPSIDAEIVDLAMSLLNDLGLKDLEIHINSIGCKQCRPVYHKALM 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  D+L++     R+     ++    +++L  +          KG          +V +
Sbjct: 181 DYLADRLDQLCDTCRS-----RYDKNPLRILDCKE---------KGCQAVLTDAPDIVDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +K      + +                            + +I   IVRGL+YYT
Sbjct: 227 LCDDCKKHFDSFQDYLSA-----------------------MGYKYEIDPRIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +               G++ GGGRYD LV +  G ++P  GF +G+ RL++ + 
Sbjct: 264 RTVFEILSTDERSP--------GTICGGGRYDDLVEQCGGPSIPGAGFGMGLERLLLCMD 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           S        K      +        +         MLR   I  E+    +++   Q KY
Sbjct: 316 SQGIIIPVPKGPD---LFIAAVGEQAYHYSIGLASMLRKRDISVEIDH-VARSLKGQFKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           AD+      ++ G+ E + G +  K+++ G+E   E+ N   
Sbjct: 372 ADKLKAQYVLVIGSDEMASGHVSCKNMSTGQEQRMELDNIAE 413


>gi|254828246|ref|ZP_05232933.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600634|gb|EEW13959.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 425

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 105/472 (22%), Positives = 190/472 (40%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+ ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +     + +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDDPSIDVEVISLAMTFFKKIGLTNIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       +   +                              +I  T+VRGL+YY
Sbjct: 227 FLNEESVAYFENVKNYLNALE-----------------------IPFEIDPTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 318 EKADI---EISAKKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R+N    II G  E   G  Q+K++  G++ +               + 
Sbjct: 374 DANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLSNTKGEK 425


>gi|47097017|ref|ZP_00234590.1| histidyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898314|ref|ZP_05258238.1| histidyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912194|ref|ZP_05262206.1| histidyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936522|ref|ZP_05268219.1| histidyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014599|gb|EAL05559.1| histidyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609116|gb|EEW21724.1| histidyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590167|gb|EFF98501.1| histidyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 425

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 105/472 (22%), Positives = 190/472 (40%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+ ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +  +    +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLTNIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       +   +                              +I  T+VRGL+YY
Sbjct: 227 FLNEESVAYFENVKNYLNALE-----------------------IPFEIDPTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 318 EKADI---EIPAKKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R+N    II G  E   G  Q+K++  G++ +               + 
Sbjct: 374 DANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLSNTKGEK 425


>gi|330838612|ref|YP_004413192.1| Histidyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746376|gb|AEB99732.1| Histidyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 420

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 93/458 (20%), Positives = 176/458 (38%), Gaps = 58/458 (12%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           PRG  D     +     +   IR +   YG+  I TP+ E+++   + + +  D   K +
Sbjct: 5   PRGTKDILPDTVAQWTHVEKVIRELCARYGYREIRTPIFEHTELFLRGIGETTDVVEKEM 64

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D   + ++LR + TA + R   +N         + + IG +FR ++   GR+R+F 
Sbjct: 65  YTFTDRGERSLTLRPENTASVVRSYLQNKLYAADALVKLFYIGSMFRYDRPQAGRYREFH 124

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH----IGINNRKILDGILEKIGLH 185
           Q  V+ +G      DAE+ ++  + L A+G++    H         R +    L++    
Sbjct: 125 QFGVEALGEENPAVDAEIIVLAVEFLRALGLQELKLHLNSVGCPKCRPVYRERLQEFFRP 184

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             ++L          D   +F    ++  L + + ++     +GA         +   L 
Sbjct: 185 HLEEL--------CTDCRSRFERNPLR--LLDCKNEHCHALAEGA-------PRITDCLC 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +      E+   +       +    L                       VRGL+YYT  
Sbjct: 228 DECRVHFTEVQSYLTAAGIPFELDANL-----------------------VRGLDYYTKT 264

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E                  +V GGGRYDGLV    G   P  GF++G+ R+++AL+  
Sbjct: 265 AFEVKYT--------PLGAQSAVAGGGRYDGLVEEVGGPPTPGIGFAVGLERVLLALEKQ 316

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           E     ++    V +  +     +          LR A + A M   + ++   Q+K A+
Sbjct: 317 ELLPEELEA---VDVFVVALGEAAQIPAFKLLHELRAAKLSAAMDF-AGRSMKAQMKQAN 372

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           ++N     I G  E       +KD+   ++    +K+ 
Sbjct: 373 KKNARFVAILGEDEVKEASALLKDMKTSEQKKLALKDF 410


>gi|149726815|ref|XP_001504200.1| PREDICTED: similar to histidyl-tRNA synthetase 2 [Equus caballus]
          Length = 506

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 128/496 (25%), Positives = 220/496 (44%), Gaps = 48/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+    + P+G  D   +++ +R +ILD + + ++ +G   ++TP  E  + L +   ++
Sbjct: 52  KSNFIIKTPKGTRDLTPQQMVVREKILDLVVSCFKRHGAKGLDTPAFELKEVLTEKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ LQD  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E     
Sbjct: 112 ---SGLIYDLQDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPTVV 165

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G++  D+ I +N+R+ILDG+   
Sbjct: 166 QGRYREFCQCDFDIAGQFD-PMIPDAECLKIMCEILSGLQLGDFLIKVNDRRILDGMFAV 224

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  +IDKL K   + V+            +      L  E  D + 
Sbjct: 225 CGVPES----KFHTICSSIDKLGKMSWKDVR-----------HEMVAKKGLAPEVADRIG 269

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +       +G  +L ++ E V   G    +I    ++ RG
Sbjct: 270 DYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYVTLFGIAE-KISFDLSLARG 328

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGIS 356
           L+YYTG VYEA+L       +++P+  GSV  GGRYDGL  +   KG  VP  G SIG+ 
Sbjct: 329 LDYYTGVVYEAVLLPTPAQAEEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVE 388

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    +           +       + L +       L  AGI+AE+   ++  
Sbjct: 389 RIFSIVEQKMKTFGEKIRTTETQVFVASPQKNFLQERLKLIAELWDAGIKAELLYKNNPK 448

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y +    PL +I G  E   G+++++ +A  +E++                  I
Sbjct: 449 LLTQLHYCENMGIPLVVIVGEQELKEGVIKLRSVASREEVA------------------I 490

Query: 477 PISELVSTVKKILQEN 492
               LV+ ++K L E+
Sbjct: 491 KRENLVAEIQKRLSES 506


>gi|229062098|ref|ZP_04199423.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228717250|gb|EEL68925.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 476

 Score =  269 bits (687), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 185/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R+I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGSVELWQYIEGQARDICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDSLIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMSTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +  +       LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDQAAKIAFDLRKAGLAVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR N     + G  E  +G++ +KD+A G +    +    S+   +
Sbjct: 427 SADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAEK 474


>gi|224499819|ref|ZP_03668168.1| histidyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 425

 Score =  269 bits (687), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 105/472 (22%), Positives = 190/472 (40%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+ ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +  +    +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDDSSIDVEVISLAMEFFRKIGLTNIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       +   +                              +I  T+VRGL+YY
Sbjct: 227 FLNEESVAYFENVKNYLNALE-----------------------IPFEIDPTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 318 EKADI---EIPAKKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R+N    II G  E   G  Q+K++  G++ +               + 
Sbjct: 374 DANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLSNTKGEK 425


>gi|168238259|ref|ZP_02663317.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194736154|ref|YP_002115584.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251796|ref|YP_002147475.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|204929541|ref|ZP_03220615.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|238912642|ref|ZP_04656479.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|229558725|sp|B5F197|SYH_SALA4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558732|sp|B4TR94|SYH_SALSV RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|194711656|gb|ACF90877.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197215499|gb|ACH52896.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197288861|gb|EDY28234.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204321260|gb|EDZ06460.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 424

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 181/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGIADHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D  +    L +L+            L                  
Sbjct: 216 QALLNDAPALGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   + + S      + LR    G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|194443808|ref|YP_002041780.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|198241839|ref|YP_002216585.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|207857930|ref|YP_002244581.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|229558726|sp|B5FR62|SYH_SALDC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558727|sp|B5R581|SYH_SALEP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558730|sp|B4T0P8|SYH_SALNS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|194402471|gb|ACF62693.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|197936355|gb|ACH73688.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|206709733|emb|CAR34085.1| Histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326624341|gb|EGE30686.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 424

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 181/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D  +    L +L+            L                  
Sbjct: 216 QALLNDAPALGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   + + S      + LR    G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|2896164|gb|AAC03121.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 424

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 181/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D  +    L +L+            L                  
Sbjct: 216 QALLNDAPALGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   + + S      + LR    G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|16765842|ref|NP_461457.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161612720|ref|YP_001586685.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167549458|ref|ZP_02343217.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167991830|ref|ZP_02572929.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168232089|ref|ZP_02657147.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168466728|ref|ZP_02700582.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194470025|ref|ZP_03076009.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197263278|ref|ZP_03163352.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|200387284|ref|ZP_03213896.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|224582941|ref|YP_002636739.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|20141626|sp|O52765|SYH_SALTY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189082308|sp|A9N202|SYH_SALPB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|254782343|sp|C0PYN1|SYH_SALPC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|16421066|gb|AAL21416.1| histidine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161362084|gb|ABX65852.1| hypothetical protein SPAB_00419 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194456389|gb|EDX45228.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|195630851|gb|EDX49443.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197241533|gb|EDY24153.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|199604382|gb|EDZ02927.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205325473|gb|EDZ13312.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205329927|gb|EDZ16691.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205333643|gb|EDZ20407.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|224467468|gb|ACN45298.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261247718|emb|CBG25546.1| HisRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994639|gb|ACY89524.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159071|emb|CBW18585.1| Histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913509|dbj|BAJ37483.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321222777|gb|EFX47848.1| Histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322613733|gb|EFY10672.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619524|gb|EFY16400.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625029|gb|EFY21858.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629528|gb|EFY26304.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634041|gb|EFY30778.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635521|gb|EFY32232.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322639803|gb|EFY36482.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644425|gb|EFY40966.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648570|gb|EFY45019.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655210|gb|EFY51519.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658257|gb|EFY54523.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664258|gb|EFY60455.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669425|gb|EFY65574.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673152|gb|EFY69258.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676544|gb|EFY72612.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683294|gb|EFY79308.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322685820|gb|EFY81813.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323130850|gb|ADX18280.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323194763|gb|EFZ79951.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199549|gb|EFZ84640.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204676|gb|EFZ89674.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208124|gb|EFZ93069.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210152|gb|EFZ95053.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217020|gb|EGA01742.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221818|gb|EGA06222.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225003|gb|EGA09258.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229292|gb|EGA13416.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235393|gb|EGA19477.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237421|gb|EGA21484.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245175|gb|EGA29176.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323248878|gb|EGA32804.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253165|gb|EGA36997.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255399|gb|EGA39167.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323263532|gb|EGA47059.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266353|gb|EGA49841.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269816|gb|EGA53266.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|332989449|gb|AEF08432.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 424

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 181/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D  +    L +L+            L                  
Sbjct: 216 QALLNDAPALGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   + + S      + LR    G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|323490013|ref|ZP_08095234.1| histidyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396309|gb|EGA89134.1| histidyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 426

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 96/462 (20%), Positives = 179/462 (38%), Gaps = 49/462 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    +      +   I ++   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MNIQAPRGTYDVLPDQSAKWQEVEQKINDLCRLYQYKEIRTPIFEHTELFQRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPG 123
             K +++ QD   + ++LR + TA + R   EN        P + +  GP+FR E+   G
Sbjct: 61  VQKEMYTFQDRGDRSLTLRPEGTASVVRSYVENKLFGMPDQPVKLFYTGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF+Q  V+ +GS     DAE+  +  +   +VG+K+            L  ++  +G
Sbjct: 121 RMRQFVQFGVEAIGSKDPAIDAEVISLAMEVYRSVGLKK------------LRLVINSLG 168

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                  +                    K  L +    +  +F        E+  + +  
Sbjct: 169 DTESRIAH--------------------KEALIKHFEPSINEFCNDCQTRLEKNPLRILD 208

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
             +D    +      +   +  E+       +   +           +   +VRGL+YY 
Sbjct: 209 CKVDRNHPLMATAPSLTNYL-NEESRAYFDEVQSYLTSM---DIEFVVDPNLVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                ++ GGGRY+GLV    G + P  GF++ I RL++AL+
Sbjct: 265 HTAFEIMSDAEGF------GAITTLAGGGRYNGLVEDLGGPDAPGIGFAMSIERLLLALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             +           + +  +  D  +  K     + LR  GI A+M   + +    Q+K 
Sbjct: 319 MEKVVIGQSNN---LEVYVVAMDESTKKKAFAVVRDLRVNGISADMDF-TGRKVKAQMKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           ADR+     I+ G  E   G + +K++A G++         S
Sbjct: 375 ADRKGAAFVIVIGETELESGKVALKEMATGEQQEMSFDEIAS 416


>gi|156740146|ref|YP_001430275.1| histidyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231474|gb|ABU56257.1| histidyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 454

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 144/473 (30%), Positives = 236/473 (49%), Gaps = 35/473 (7%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +  RG  D     + +R  I++++ +++E YGF+P++TP++EY+++L   + D+    
Sbjct: 4   RVQNIRGMRDHLPSAMILRQHIINTLTSVFERYGFEPLQTPIVEYAETLDGKIGDD---E 60

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++  +D  G+ ++LRYD T PLAR VA+    + FP R Y IG  +R E+ G GR+R+
Sbjct: 61  KLIYRFEDHGGRKVALRYDQTVPLARVVAQYQGQLTFPWRRYAIGQSYRGERPGRGRYRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q D+D VGS++  ADAE+  ++ D L A+G     +   I++R++L GI    GL   
Sbjct: 121 LWQADIDIVGSASPVADAEILAVLTDALTALGFTG--FTTLISHRQVLGGIARVSGLDDA 178

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
              N      RAIDKLDK G+ GV+  L              + +T +  + +++ + + 
Sbjct: 179 SAGNVY----RAIDKLDKIGIDGVRNELL------------QSGVTPDAAERILALIDLY 222

Query: 248 L--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              +  ++EL + +      ++  + L  I    R  G    RI I+  + RGL YYTG 
Sbjct: 223 GSADDVLNELAQRLHDDERAQQAIDNLRAIIGYARAMGVPEERIAIAPRLARGLSYYTGA 282

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E+I+  P           GS+ GGGRYD L+  F G+++P  G + GI RL   +++L
Sbjct: 283 VFESIIQEPP---------MGSLLGGGRYDELIGMFAGRSIPTVGLAFGIERLHDVMEAL 333

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                  +     +      + +   +     Q LR AG+  E  L  S+  G QL+YAD
Sbjct: 334 GMGP---ESRTIAVALVTLFNPEMAMESLGLAQELRRAGLMIETTLDPSEKLGRQLQYAD 390

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           RR  P A++ G  E +RG + +K L  G++ S           A       P 
Sbjct: 391 RRGIPYALVLGPDELARGEVVVKHLRSGEQRSVARSAVAGMLHAAAEAQRTPR 443


>gi|30264473|ref|NP_846850.1| histidyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529931|ref|YP_021280.1| histidyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187294|ref|YP_030546.1| histidyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481486|ref|YP_038454.1| histidyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52141104|ref|YP_085725.1| histidyl-tRNA synthetase [Bacillus cereus E33L]
 gi|165871996|ref|ZP_02216637.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167640711|ref|ZP_02398971.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170709260|ref|ZP_02899680.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|254724670|ref|ZP_05186453.1| histidyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|39932344|sp|Q81LI6|SYH2_BACAN RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|81394747|sp|Q6HDC2|SYH2_BACHK RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|81686102|sp|Q634E2|SYH2_BACCZ RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|30259131|gb|AAP28336.1| histidine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505079|gb|AAT33755.1| histidyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181221|gb|AAT56597.1| histidyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333042|gb|AAT63688.1| histidine--tRNA ligase (histidyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51974573|gb|AAU16123.1| histidine--tRNA ligase (histidyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|164712286|gb|EDR17822.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167511283|gb|EDR86669.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170125836|gb|EDS94743.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0389]
          Length = 423

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 183/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLAVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 375 ADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 421


>gi|229169146|ref|ZP_04296861.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228614374|gb|EEK71484.1| Histidyl-tRNA synthetase 2 [Bacillus cereus AH621]
          Length = 476

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 185/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R+I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGSVELWQYIEGQARDICRRYNYKEIRTPMFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMSTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------TMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +  +       LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDRAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR N     + G  E  +G++ +KD+A G +    +    S+   +
Sbjct: 427 SADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAEK 474


>gi|217964333|ref|YP_002350011.1| histidyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217333603|gb|ACK39397.1| histidyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571101|emb|CAR84280.1| hisS [Listeria monocytogenes L99]
          Length = 425

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 104/472 (22%), Positives = 190/472 (40%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+ EN+ ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENFQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +     + +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDDPSIDVEVISLAMTFFKKIGLTNIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       +   +                              +I  T+VRGL+YY
Sbjct: 227 FLNEESVAYFENVKNYLNALE-----------------------IPFEIDPTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 318 EKADI---EIPAKKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R+N    II G  E   G  Q+K++  G++ +               + 
Sbjct: 374 DANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLTNTKGEK 425


>gi|16800623|ref|NP_470891.1| histidyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|32130133|sp|Q92BJ3|SYH_LISIN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|16414042|emb|CAC96786.1| histidyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 425

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 100/472 (21%), Positives = 187/472 (39%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +  +   + ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLESAFNKVCENYQYEEIRTPIFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++  D  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFLDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +  +    +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLTNIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       + + +                              +I  T+VRGL+YY
Sbjct: 227 FLNEESVAYFENVKKYLTALE-----------------------IPFEIDPTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVKEFGGPDTPGIGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E +    K    + +  +    ++  K       LR  GI AE      +    QLK
Sbjct: 318 EKAEINIPETKP---LEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKLKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R+     +I G  E   G  Q+K++  G++ +               + 
Sbjct: 374 DANRKKAIYTVILGEEELQTGNYQLKNMETGEQEAVSETTIIEKLTNTKEEK 425


>gi|168243301|ref|ZP_02668233.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194450295|ref|YP_002046580.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|229558729|sp|B4TD92|SYH_SALHS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|194408599|gb|ACF68818.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|205337681|gb|EDZ24445.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 424

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 182/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   ++  +L  D  +    L +L+            L                  
Sbjct: 216 QALLNDAPVLGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   + + S      + LR    G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|16761437|ref|NP_457054.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29140866|ref|NP_804208.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213028525|ref|ZP_03342972.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
 gi|213161949|ref|ZP_03347659.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213425332|ref|ZP_03358082.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213649664|ref|ZP_03379717.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213861387|ref|ZP_03385857.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289825427|ref|ZP_06544664.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|29427529|sp|Q8Z4P4|SYH_SALTI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|25293366|pir||AI0821 histidine-tRNA ligase (EC 6.1.1.21) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16503737|emb|CAD02725.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136491|gb|AAO68057.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 424

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 182/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   ++  +L  D  +    L +L+            L                  
Sbjct: 216 QALLNDAPVLGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   + + S      + LR    G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|291387473|ref|XP_002710302.1| PREDICTED: histidyl-tRNA synthetase 2-like [Oryctolagus cuniculus]
          Length = 506

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 122/495 (24%), Positives = 219/495 (44%), Gaps = 48/495 (9%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
                + P+G  D   +++ +R +ILD + + ++ +G   ++TP  E  + L +   +  
Sbjct: 53  PNFIIKTPKGTRDFSPQQMVVREKILDVVVSCFKRHGAQGLDTPAFELKEMLTENYGEN- 111

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--P 122
             +  ++ L+D  G+ +SLRYDLT P ARY+A N    +        G V+R E      
Sbjct: 112 --SGLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLKKMKRYHV---GKVWRRESPAIVQ 166

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+R+F QCD D  G          C+ +   + + G++  ++ I +N+R+I+DG+    
Sbjct: 167 GRYREFCQCDFDIAGQFDPMIPDAECLKIICEILS-GLQLGNFLIKVNDRRIIDGVFAVC 225

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+       +  ++  +IDKLDK     V+            +      L  E  D +  
Sbjct: 226 GVPES----KFRVICSSIDKLDKMPWTDVR-----------HEMVTKKGLAPEVADRIGD 270

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL
Sbjct: 271 YVQCHGGVSLVEQLFQDPRLSQNKQALEGLRDLKLLFEYLTLFGIT-DKISFDLSLARGL 329

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISR 357
           +YYTG +YEA+L       +++P+  GSV  GGRYD LV+ F      VP  G SIG+ R
Sbjct: 330 DYYTGVIYEAVLLQTPAQAEEEPLNVGSVAAGGRYDELVAMFDPKGHKVPCVGLSIGVER 389

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +   ++    +           +       + L +       L  AGI+AEM   ++   
Sbjct: 390 IFYIVEQRMKALGEKIRATETQVFVATPQKNFLQERLKLIAELWDAGIKAEMPYKNNPKL 449

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +QL Y +    PL +I G  E   G+++I+ +A   E++                  + 
Sbjct: 450 LSQLHYCENTGIPLVVIIGEQELKEGVVKIRSVASRGEVA------------------VK 491

Query: 478 ISELVSTVKKILQEN 492
             +LV+ ++K L E+
Sbjct: 492 REDLVTEIQKRLSES 506


>gi|218905598|ref|YP_002453432.1| histidyl-tRNA synthetase [Bacillus cereus AH820]
 gi|218536362|gb|ACK88760.1| histidyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 423

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 183/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVKEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +          LR AG+  E      +    Q K 
Sbjct: 319 AENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLAVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR       + G  E  +G++ +KD+A G++    +    S+   +
Sbjct: 375 ADRLKAKFVAVLGEDELDKGIINLKDMATGEQEEVALDVFASYVAEK 421


>gi|228999191|ref|ZP_04158772.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|229006738|ref|ZP_04164372.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228754599|gb|EEM04010.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228760536|gb|EEM09501.1| Histidyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 423

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 186/468 (39%), Gaps = 51/468 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     I +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGTIELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMYGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +    +        E +
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + ++ E        D   +     +++L  + + D + +    A         +  
Sbjct: 181 IAHFEPRIGEF-----CSDCQSRLEKNPLRIL--DCKKDRNHELMSTA-------PSITE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++ EL+                              +    +VRGL+YY
Sbjct: 227 YLNEESTTYYEKVQELLT-----------------------MMGVPFEKDPNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E        ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 264 QHTVFEI------MSEADGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 318 KAENIELPIEHNIDC---YVVALGDKAKDHAAKIAFDLRKAGLSVEKDY-LDRKMKAQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR N     + G  E  +G++ +KD+A G +    +    S+   +
Sbjct: 374 SADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAEK 421


>gi|57524990|ref|NP_001006144.1| histidyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|53131920|emb|CAG31857.1| hypothetical protein RCJMB04_12f15 [Gallus gallus]
          Length = 500

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 124/475 (26%), Positives = 216/475 (45%), Gaps = 27/475 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   K++ IR R+  +I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 47  KHKFVLKTPKGTRDYGPKQMAIRERVFSAIIACFKRHGAEVIDTPVFELKETLTGKYGED 106

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 107 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPAMTRG 162

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G          C+ +   + +  ++  D+ I +N+R+ILDG+    G
Sbjct: 163 RYREFYQCDFDIAGQFDPMIPDAECLKIVQEILS-DLQLGDFLIKVNDRRILDGMFAVCG 221

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + V+            +      L+ E  D +  +
Sbjct: 222 VPDS----KFRTICSSVDKLDKMPWEEVR-----------NEMVGEKGLSPEAADRIGEY 266

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +     + E       +      ++G  ++ ++ E +   G    +I    ++ RGL+
Sbjct: 267 VQLHGGMDLIEQLLQDPKLSQNKLVKEGLGDMKLLFEYLTLFGIT-GKISFDLSLARGLD 325

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L     +  ++ V  GSV GGGRYDGL  +   KG+ VP  G SIGI R+
Sbjct: 326 YYTGVIYEAVLLQQN-DHGEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGISIGIERI 384

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              L+    ++          +         L +       L  AGI+AE+    +    
Sbjct: 385 FSILEQRVEASEEKIRTTETQVLVASAQKKLLEERLKLISELWDAGIKAEVLYKKNPKLL 444

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           NQL+Y +    PL  I G  E   G+++++ +A G+E++   ++       R  Q
Sbjct: 445 NQLQYCEDTGIPLVAIVGEQELKDGVVKLRVVATGEEVNIRRESLVEEIRRRTNQ 499


>gi|229158019|ref|ZP_04286090.1| Histidyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228625472|gb|EEK82228.1| Histidyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 476

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/468 (22%), Positives = 182/468 (38%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E  +G++ +KD+A  ++    +    S+   +
Sbjct: 427 SADRLKAKFVAVLGEDELDKGIINLKDMATSEQEEVALDVFASYVAEK 474


>gi|255658301|ref|ZP_05403710.1| histidine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849618|gb|EEX69625.1| histidine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 421

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/469 (22%), Positives = 185/469 (39%), Gaps = 52/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D     +   N I   IR I   YGF+ I TPL E+++   + + +  D 
Sbjct: 1   MLTNAPRGTKDILPDTVGEWNYIEGKIREICGRYGFEEIRTPLFEHTELFHRGIGEGTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
            +K +++ +D  G+ I+LR + TA + R   +N         + + IG +FR ++   GR
Sbjct: 61  VDKEMYTFEDRGGRSITLRPENTASVVRAYLQNKLYGDSSLVKLFYIGSMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIG 183
            R+F Q  V+++G     ADAE+ M+  D L+++G+K     +      K      + + 
Sbjct: 121 MREFHQFGVESLGEENPMADAEIIMLAVDFLQSLGLKDLKLSLNSVGCPKCRPVYRKVLQ 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  DKL++        D  D+F    +++L  +   D                  +   
Sbjct: 181 DYFRDKLDDL-----CEDCQDRFERSPLRILDCKVDADKPYMA---------DAPKITDC 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +  +   ++   +       +    L                       VRGL+YYT
Sbjct: 227 LCDECREHFEKVQSYLTNAGIEFELDPRL-----------------------VRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E                  +V GGGRYDGL+    G+  PA GF+ G+ R+++AL+
Sbjct: 264 KTAFEIKYA--------PLGAQSAVAGGGRYDGLIEEIGGKPTPAVGFATGLERVLLALE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                    K+        +     + +        LR AG++A M   + ++   Q+K 
Sbjct: 316 KQGLIPEQPKKTDA---FVVALGEAAKAPAFTLLTKLRRAGLKASMDY-AGRSMKAQMKQ 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           A++ N   A+I G  E     + +KD+ K  +             A V 
Sbjct: 372 ANKANARFALIIGEDEVKESCVMLKDMEKSVQQKVSFDAIIEKLCAEVK 420


>gi|226224121|ref|YP_002758228.1| histidyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254824421|ref|ZP_05229422.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|225876583|emb|CAS05292.1| histidyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|293593656|gb|EFG01417.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
          Length = 425

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/471 (22%), Positives = 191/471 (40%), Gaps = 51/471 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    + + ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKKVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +  +    +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLTNIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       + + +                              +I ST+VRGL+YY
Sbjct: 227 FLNEESVAYFENVKKYLNALE-----------------------IPFEIDSTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 318 EKADI---KIPAKKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            A+R+N    II G  E   G  Q+K++  G++ +               +
Sbjct: 374 DANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLINTKGE 424


>gi|163942153|ref|YP_001647037.1| histidyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864350|gb|ABY45409.1| histidyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 423

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 105/467 (22%), Positives = 185/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R+I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGSVELWQYIEGQARDICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    +  
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQAH 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   E  I     D   +     +++L  + + D + +    A         +  +
Sbjct: 177 RDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMSTA-------PSITEY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D      ++ EL+                              +    +VRGL+YY 
Sbjct: 228 LNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+ALK
Sbjct: 265 HTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +     +  +       LR AG+  E      +    Q K 
Sbjct: 319 AENIELPIEHSIDC---YVVALGEKAKDRAAKVAFDLRKAGLSVEKDY-LDRKMKAQFKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR N     + G  E  +G++ +KD+A G +    +    S+   +
Sbjct: 375 ADRLNAKYVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAEK 421


>gi|56412599|ref|YP_149674.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197361534|ref|YP_002141170.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81678180|sp|Q5PNI1|SYH_SALPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558731|sp|B5BAY6|SYH_SALPK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|56126856|gb|AAV76362.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093010|emb|CAR58443.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 424

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 182/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   ++  +L  D  +    L +L+            L                  
Sbjct: 216 QALLNDAPVLGDYLDDDSREHFTGLCKLLDAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   + + S      + LR    G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|170767377|ref|ZP_02901830.1| histidyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170123711|gb|EDS92642.1| histidyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 424

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/480 (22%), Positives = 189/480 (39%), Gaps = 64/480 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDDESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVASGADTQSAALALAERLRDELPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +     +A
Sbjct: 366 GG-NFRKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLRTLLA 424


>gi|1942448|pdb|1HTT|A Chain A, Histidyl-Trna Synthetase
 gi|1942449|pdb|1HTT|B Chain B, Histidyl-Trna Synthetase
 gi|1942450|pdb|1HTT|C Chain C, Histidyl-Trna Synthetase
 gi|1942451|pdb|1HTT|D Chain D, Histidyl-Trna Synthetase
          Length = 423

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/469 (22%), Positives = 185/469 (39%), Gaps = 60/469 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + + +  D  
Sbjct: 3   NIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+   GR+R
Sbjct: 63  EKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R      L  
Sbjct: 123 QFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARANYRDALVA 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 +KL+E        D   +     +++L  +     +                + 
Sbjct: 183 FLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LLNDAPALG 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  +  +    L +L++           L                       VRGL+Y
Sbjct: 226 DYLDEESREHFAGLCKLLESAGIAYTVNQRL-----------------------VRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ RL++ 
Sbjct: 263 YNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLL 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGN 419
           ++++       K    V I  +   +D+ S      + LR    G++     G   NF  
Sbjct: 315 VQAVN---PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHGGG-NFKK 370

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 371 QFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 419


>gi|163755331|ref|ZP_02162451.1| histidyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161324751|gb|EDP96080.1| histidyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 455

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 144/481 (29%), Positives = 225/481 (46%), Gaps = 58/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +PRG  D    E+  RN I + I++ ++N+GF PIETP  E  ++L GK+  + D  
Sbjct: 4   KPSIPRGTRDFSPIEVAKRNYIFNIIKSAFQNFGFQPIETPSFENLETLTGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDGQ----------------------WISLRYDLTAPLARYVAENFDTIVF 104
            K +F + +   +                        +LRYDLT P ARYV ++ + I F
Sbjct: 62  -KLIFKILNSGDKVKKADLKALEDGNLARFSNSLSEKALRYDLTVPFARYVVQHQNDITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GRFR+F QCD D VGS +   + E   +       +G+    
Sbjct: 121 PFKRYQIQPVWRADRPANGRFREFFQCDADVVGSKSLWQEVEFVQLYDKVFSNLGLNG-- 178

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG    DKL +  + L   DKLDK G  GVK  +         
Sbjct: 179 VTIKINNRKILSGIAEVIG--AKDKLIDFTVAL---DKLDKIGEDGVKNEML-------- 225

Query: 225 DFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  +++E I+ +    S     ++ + +L  L+  +  G +G +EL  + + +   
Sbjct: 226 ----TKGISAEAIEKVQPLFSFSGNLDEKLAQLKGLLSSSEEGMQGISELEFVFDAINVL 281

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G  +  + +  T+ RGL YYTG ++E      V          GS+GGGGRYD L   F 
Sbjct: 282 GLETATLDLDITLARGLNYYTGAIFEVAAPEGVK--------MGSIGGGGRYDDLTGIFG 333

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            ++V   G S G+ R+ + L++L+     +     V +  ++             ++LR 
Sbjct: 334 LKDVSGVGISFGLDRIYLVLEALDLFPETVS--DKVDVLCVNFGEKEALASMRLIKVLRE 391

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AG  AE+F   +KN   Q+ YA++RN P  II G  E       +K++  G +L      
Sbjct: 392 AGKSAELFPD-NKNMKKQMNYANKRNIPYVIIIGGNELENNTCVVKNMKNGTQLEVPFDE 450

Query: 463 N 463
            
Sbjct: 451 V 451


>gi|62181089|ref|YP_217506.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|75505635|sp|Q57LI7|SYH_SALCH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|62128722|gb|AAX66425.1| histidine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322715576|gb|EFZ07147.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 424

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 181/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D  +    L +L+            L                  
Sbjct: 216 QALLNDASALGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   + + S      + LR    G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|229086967|ref|ZP_04219124.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228696343|gb|EEL49171.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 423

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 103/468 (22%), Positives = 186/468 (39%), Gaps = 51/468 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIQIPRGTQDILPGSVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   G
Sbjct: 61  VQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMYGDATQPTKLYYIGQMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +    +        E +
Sbjct: 121 RYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLGDAASRQAHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + ++ E        D   +     +++L  + + D   +    A         +  
Sbjct: 181 IAHFEPRIGEF-----CSDCQSRLEKNPLRIL--DCKKDRGHELMNAA-------PSITE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++ EL+                              +    +VRGL+YY
Sbjct: 227 YLNEESTAYYEKVQELLT-----------------------MMDVPFEKDLNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 264 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 318 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLSVEKDY-LDRKMKAQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR N     + G  E  +G++ +K +A G++    +    S+   +
Sbjct: 374 SADRLNAKFVAVLGEDELDKGIINLKSMATGEQEEVALDVFASYVAEK 421


>gi|296192943|ref|XP_002744291.1| PREDICTED: probable histidyl-tRNA synthetase, mitochondrial isoform
           1 [Callithrix jacchus]
          Length = 506

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 126/496 (25%), Positives = 217/496 (43%), Gaps = 48/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K       P+G  D   +++ +R +ILD + + ++ +G   ++TP  E  + L +   ++
Sbjct: 52  KPNFIIRTPKGTRDLSPQQMVVREKILDLVVSCFKRHGAKGMDTPAFELKEMLTEKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ L+D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E     
Sbjct: 112 ---SGLMYDLKDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPTIV 165

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G++  D+ I +N+R+I+DG+   
Sbjct: 166 QGRYREFCQCDFDIAGQFD-PMIPDAECLKIMCEILNGLQLGDFLIKVNDRRIVDGMFAV 224

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  +IDKLDK   + V+            +      L  E  D + 
Sbjct: 225 CGVPES----KFRTICSSIDKLDKMAWKDVR-----------HEMVAKKGLAPEVADRIG 269

Query: 242 SFLSIDLEKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++     +S+         +       +G  +L ++ E +   G    +I    ++ RG
Sbjct: 270 DYVRCHGGESLVKQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGIAK-KISFDLSLARG 328

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGIS 356
           L+YYTG +YEA+L        ++P+  GSV  GGRYDGLV  F      VP  G SIG+ 
Sbjct: 329 LDYYTGVIYEAVLLHTPTQAGEEPLSVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVE 388

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    +           +       + L +       L  AGI+AEM   ++  
Sbjct: 389 RIFNIVEQRMKTFGEKVRTTETQVLVATPHKNFLHERLKLIAELWDAGIKAEMLYKNNPK 448

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y +    PL +I G  E   G+++I+ +A  +E++                  I
Sbjct: 449 LLTQLHYCESTGIPLVVIVGEQELKEGVVKIRSVASREEVA------------------I 490

Query: 477 PISELVSTVKKILQEN 492
               LV+ ++K L E+
Sbjct: 491 KRENLVAEIQKRLSES 506


>gi|332288522|ref|YP_004419374.1| histidyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330431418|gb|AEC16477.1| histidyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 427

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/463 (23%), Positives = 184/463 (39%), Gaps = 64/463 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  +   +   I+    +YG+  I  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDYLPSDTPLWQWVEGKIKQRLSSYGYSEIRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +F+  D D + ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMFTFNDRDDESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF QC V+  G +    +AE+ +M A   + +GI  +     +    +  RK 
Sbjct: 117 PQKGRYRQFHQCGVEVFGIANPLIEAELIIMTAKLWQDLGIADHVQLQLNSIGSLEARKN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L +      D+L+E        D   +     +++L  +                 
Sbjct: 177 YRAALVEYLQDYVDQLDE--------DSKRRLTTNPLRILDSKDERVQQ---------IL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  D  +    L  +++                           R +I+  
Sbjct: 220 NNAPKLHDYLDEDSRQHFATLCSILE-----------------------QYGIRYEINQK 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V GGGRYDGLV +  G   PA GF++G
Sbjct: 257 LVRGLDYYNKTVFEWVTTA--------LGAQGTVCGGGRYDGLVEQLGGHATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++ +  +         V I  +    ++          LR+A   I+  M   
Sbjct: 309 LERLVLLIQEVVENPPINPN---VDIYVIHQGDNTTLPALQLASQLRSALPQIKV-MLHC 364

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
           S  NF  Q K AD+     A+I G  E ++  + IKDL  G++
Sbjct: 365 SGGNFKKQFKRADKLGAKFALILGEDEVAQQQVVIKDLLSGEQ 407


>gi|46907748|ref|YP_014137.1| histidyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47094550|ref|ZP_00232211.1| histidyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|254852144|ref|ZP_05241492.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931455|ref|ZP_05264814.1| histidyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|300764813|ref|ZP_07074803.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461798|sp|Q71ZF0|SYH_LISMF RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|46881017|gb|AAT04314.1| histidyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47017076|gb|EAL07948.1| histidyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258605447|gb|EEW18055.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583007|gb|EFF95039.1| histidyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|300514489|gb|EFK41546.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 425

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 105/471 (22%), Positives = 191/471 (40%), Gaps = 51/471 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    + + ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKKVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +  +    +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLINIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       + + +                              +I ST+VRGL+YY
Sbjct: 227 FLNEESVAYFENVKKYLNALE-----------------------IPFEIDSTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 318 EKADI---KIPAKKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            A+R+N    II G  E   G  Q+K++  G++ +               +
Sbjct: 374 DANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLINTKGE 424


>gi|332234660|ref|XP_003266524.1| PREDICTED: probable histidyl-tRNA synthetase, mitochondrial isoform
           1 [Nomascus leucogenys]
          Length = 506

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 126/496 (25%), Positives = 220/496 (44%), Gaps = 48/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     + P+G  D   + + +R +ILD + + ++ +G   ++TP  E  ++L +   ++
Sbjct: 52  KPNFIIKTPKGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ L+D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E     
Sbjct: 112 ---SGLMYDLKDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPAIV 165

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G++  D+ I +N+R+I+DG+   
Sbjct: 166 QGRYREFCQCDFDIAGQFD-PMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAV 224

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  +IDKLDK   + V+            +      L  E  D + 
Sbjct: 225 CGVPES----KFRAICSSIDKLDKMAWKDVR-----------HEMVAKKGLAPEVADRIG 269

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +       +G  +L ++ E +   G  +++I    ++ RG
Sbjct: 270 DYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARG 328

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGIS 356
           L+YYTG +YEA+L    +   + P+  GSV  GGRYDGLV  F      VP  G SIG+ 
Sbjct: 329 LDYYTGVIYEAVLLQTPIQAGEDPLNVGSVAAGGRYDGLVGMFHPKGHKVPCVGLSIGVE 388

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    +           +       + L +       L  +GI+AEM   ++  
Sbjct: 389 RIFYIVEQRMKTKGEKVRTTETQVFVATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPK 448

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y +    PL +I G  E   G+++I+ +A  +E++                  I
Sbjct: 449 LLTQLHYCESTGIPLVVIIGEQELKEGVIKIRSVASREEVA------------------I 490

Query: 477 PISELVSTVKKILQEN 492
               LV+ ++K L E+
Sbjct: 491 KRENLVAEIQKRLSES 506


>gi|161502324|ref|YP_001569436.1| histidyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189082307|sp|A9MHL6|SYH_SALAR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|160863671|gb|ABX20294.1| hypothetical protein SARI_00357 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 424

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/480 (21%), Positives = 181/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIESTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D  +    L +L+            L                  
Sbjct: 216 QALLNDAPALGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   +++ S      + LR     ++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGTETQSAAMTLAERLRDEMPDVKLI 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVLGESEVANGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|16803560|ref|NP_465045.1| histidyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501540|ref|ZP_03669847.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254829721|ref|ZP_05234376.1| histidyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|32130129|sp|Q8Y708|SYH_LISMO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|16410949|emb|CAC99598.1| histidyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 425

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 105/472 (22%), Positives = 190/472 (40%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+ ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +  +    +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLTNIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       +   +                              +I  T+VRGL+YY
Sbjct: 227 FLNEESVAYFENVKNYLNALE-----------------------IPFEIDPTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 318 EKADI---EIPAKKPLEVYVITAQPEAELKGVTLVNKLRQNGISAEKDY-LKRKFKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R+N    II G  E   G  Q+K++  G++ +               + 
Sbjct: 374 DANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLSNTKGEK 425


>gi|332311962|gb|EGJ25057.1| Histidyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 427

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 105/471 (22%), Positives = 191/471 (40%), Gaps = 51/471 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    + + ENY ++ I TP+ E+++   + + D  D 
Sbjct: 3   MDLQLPRGTRDILPEEVSKWHFLETEFKKVCENYQYEEIRTPVFEHTELFERGVGDSTDI 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 63  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 122

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +  +    +G+      I     K       E +
Sbjct: 123 RQRQFTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLINIKLVINSLGDKESRLKHREAL 182

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 183 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       + + +                              +I ST+VRGL+YY
Sbjct: 229 FLNEESVAYFENVKKYLNALE-----------------------IPFEIDSTMVRGLDYY 265

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 266 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLAL 319

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 320 EKADI---KIPAKKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLK 375

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            A+R+N    II G  E   G  Q+K++  G++ +               +
Sbjct: 376 DANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLINTKGE 426


>gi|311278555|ref|YP_003940786.1| histidyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308747750|gb|ADO47502.1| histidyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 424

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/476 (21%), Positives = 184/476 (38%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETALWQRIEGTLKEVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +                 
Sbjct: 177 YREALVAYLEQFKDKLDE--------DCKRRMYTNPLRVLDSKN---------PDVQALL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +    +  +L  D  +    L  L+            L                      
Sbjct: 220 DNAPALGDYLDDDSREHFSGLCALLDAAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRAAPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + +R    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPVVDIYLVAAGNDTQSAAMRLAEDVRDQLPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E +   + +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVALVLGESEIAERSVVVKDLRSGEQTTVAQDSVAAHLR 420


>gi|317128223|ref|YP_004094505.1| histidyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315473171|gb|ADU29774.1| histidyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 423

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 98/467 (20%), Positives = 185/467 (39%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D   ++      I      +   Y +  I TP+ E ++   + + D  D 
Sbjct: 1   MNFKIPRGTQDILPEQSAKWQYIEQRAHELCRTYNYKEIRTPMFEQTEVFARGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPG 123
             K +++  D  G+ ++LR + TA + R   EN        P + Y IGP+FR E+   G
Sbjct: 61  VQKEMYTFDDRGGRSLTLRPEGTASVVRSYVENKMHGLPDQPVKLYYIGPMFRYERPQSG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF+Q  V+ +GS     DAE+  +  D  + +G+      I     K          
Sbjct: 121 RMRQFVQFGVEALGSDDPAIDAEVIALAMDLYKGLGLTDLKLVINSLGDKDSRTAHRNAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +  I     D   +     +++L  + + D+  +         +    ++ +
Sbjct: 181 IDH----FKPRIEEFCSDCQARLEKNPLRIL--DCKKDHGHELM-------DTAPSILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+   +    ++   +                               + +T+VRGL+YY 
Sbjct: 228 LNESSKAYFEQVQRYLTAI-----------------------GIEFVVDATLVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E ++               ++ GGGRY+GLV  F G +VP  GF++ I RL++AL+
Sbjct: 265 NTAFEIMIDGKGF------GAITTLSGGGRYNGLVEEFGGSDVPGIGFALSIERLLMALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +        + +   L+       +  +        LR  G+  +     +K    Q K 
Sbjct: 319 AQGIELPIQEGIDAYLVV---MGEEPKNVAPKLLHDLRKQGLTVDTDY-LNKKMKAQFKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR N   AII G  E     + +K L+ G++   +++   S+ +++
Sbjct: 375 ADRLNASFAIILGEQELENDSVMVKALSTGEQEEVKVQELVSYLKSK 421


>gi|288555365|ref|YP_003427300.1| histidyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288546525|gb|ADC50408.1| histidyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 426

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 104/469 (22%), Positives = 184/469 (39%), Gaps = 49/469 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    EI I   I    + I   Y +  I TP+ E+++   + + +  D 
Sbjct: 1   MSMQIPRGTQDLLPGEIEIWQYIEQKSKEICSRYNYKEIRTPIFEHTEVFARGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++  D   + ++LR + TA + R    N        P + +  GP+FR E+   G
Sbjct: 61  VQKEMYTFTDRGERSLTLRPEGTAGVVRSFVGNKLYGEASQPTKLFYTGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF+Q  V+ +GS+    DAE+  ++      +G+                       
Sbjct: 121 RMRQFVQFGVEALGSADPAIDAEVLALVMSIYYELGLT---------------------- 158

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                      I L      DK   +  +  L      + G+F        E+  + +  
Sbjct: 159 ----------DIKLVLNSLGDKESREAHRDALINHFKPSIGEFCSDCQNRLEKNPLRILD 208

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              D E  + +    +      E+       + + + +         +  T+VRGL+YY 
Sbjct: 209 CKKDREHPLMQTAPSIHDYYT-EESAAYFKEVKQHLDQMNLP---YVVDPTLVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +       E +      ++ GGGRY+GLV  F G   P  GF+  I RLI+ALK
Sbjct: 265 HTAFEVMA------EGEGFGAITTLCGGGRYNGLVQEFGGPETPGIGFAFSIERLIMALK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +     +   ++   L+T       + +K       LR AGIR +      K    Q K 
Sbjct: 319 AQGKVPDFGNQLDCFLVTL---GDAAKAKSVELLYQLRQAGIRCDKDY-LDKKMKAQFKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ADR N     I G  E +   + +K++  G+++   +    ++ + +V 
Sbjct: 375 ADRLNVRYTAILGDNELNENRINVKNMETGEQVEVALDTFITYMKEQVE 423


>gi|197101367|ref|NP_001126785.1| probable histidyl-tRNA synthetase, mitochondrial precursor [Pongo
           abelii]
 gi|75061640|sp|Q5R5E5|SYHM_PONAB RecName: Full=Probable histidyl-tRNA synthetase, mitochondrial;
           AltName: Full=Histidine--tRNA ligase; Short=HisRS;
           AltName: Full=Histidine--tRNA ligase-like; Flags:
           Precursor
 gi|55732644|emb|CAH93021.1| hypothetical protein [Pongo abelii]
          Length = 506

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 126/496 (25%), Positives = 220/496 (44%), Gaps = 48/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     + P+G  D   + + +R +ILD + + ++ +G   ++TP  E  ++L +   ++
Sbjct: 52  KPNFIIKTPKGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ L+D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E     
Sbjct: 112 ---SGLMYDLKDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPTIV 165

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G++  D+ I +N+R+I+DG+   
Sbjct: 166 QGRYREFCQCDFDIAGQFD-PMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAV 224

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  +IDKLDK   + V+            +      L  E  D + 
Sbjct: 225 CGVPES----KFRAICSSIDKLDKMAWKDVR-----------HEMVVKKGLAPEVADRIG 269

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +       +G  +L ++ E +   G  +++I    ++ RG
Sbjct: 270 DYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARG 328

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGIS 356
           L+YYTG +YEA+L        ++P+  GSV  GGRYDGLV  F      VP  G SIG+ 
Sbjct: 329 LDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVE 388

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    +           +       + L +       L  +GI+AEM   ++  
Sbjct: 389 RIFYIVEQRMKTKGEKVRTTETQVFVATPQKNFLQERLKLIAELWNSGIKAEMLYKNNPK 448

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y +    PL +I G  E   G+++I+ +A  +E++                  I
Sbjct: 449 LLTQLHYCESTGIPLVVIIGEQELKEGVIKIRSVASREEVA------------------I 490

Query: 477 PISELVSTVKKILQEN 492
               LV+ ++K L E+
Sbjct: 491 KRENLVAEIQKRLSES 506


>gi|229076032|ref|ZP_04209003.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
 gi|228707066|gb|EEL59268.1| Histidyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
          Length = 476

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 183/468 (39%), Gaps = 49/468 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +  ++PRG  D     + +   I    R I   Y +  I TP+ E+++   + + D  D
Sbjct: 53  NMSIQIPRGTQDILPGTVELWQYIEGQAREICRRYNYKEIRTPIFEHTELFLRGVGDTTD 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGP 122
              K ++S QD   + ++LR + TAP+ R   EN        P + Y IG +FR E+   
Sbjct: 113 IVQKEMYSFQDRGERSLTLRPEGTAPVVRSYVENKMFGDATQPTKLYYIGQMFRYERPQA 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF+Q  ++ +GS+    DAE+  +  +    +G+K     +        D    + 
Sbjct: 173 GRYRQFVQFGIEAIGSNDPAIDAEVIALAVEFYRGMGLKNIKVVLNSLG----DAASRQA 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                    E  I     D   +     +++L  + + D + +    A         +  
Sbjct: 229 HRDALIAHFEPRIGEFCSDCQSRLEKNPLRIL--DCKKDRNHELMGTA-------PSITE 279

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D      ++ EL+                              +    +VRGL+YY
Sbjct: 280 YLNEDSAVYYDKVQELLT-----------------------MMDVPFEKDPNLVRGLDYY 316

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E       M+E +      ++ GGGRY+GLV    G  +P  GF++ I RLI+AL
Sbjct: 317 QHTVFEI------MSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIERLIMAL 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+          +       +     +          LR AG+  E      +    Q K
Sbjct: 371 KAENIELPIEHSIDC---YVVALGEKAKDHAAKVAFDLRKAGLLVEKDY-LDRKMKAQFK 426

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR N     + G  E  +G++ +KD+A G +    +    S+   +
Sbjct: 427 SADRLNAKFVAVLGEDELDKGIINLKDMATGGQEEVALDVFASYVAEK 474


>gi|46125005|ref|XP_387056.1| hypothetical protein FG06880.1 [Gibberella zeae PH-1]
          Length = 551

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 127/525 (24%), Positives = 206/525 (39%), Gaps = 62/525 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  KTK   + P+G  D   K++ IR+ I ++I  +++ +G   I+TP+ E  + L    
Sbjct: 1   MAPKTKFELKTPKGTKDWEGKDMVIRDHIFNTITQVFKRHGGVTIDTPVFELREILAGKY 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K ++ L D  G+  SLRYDLT P AR++A N                      
Sbjct: 61  GED---SKLIYDLADQGGEICSLRYDLTVPFARFLAMNKQIQNIKRYHIAKVYRRDQPAM 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+F QCD D  G+          + +   +         Y I +N+RKILDGI +
Sbjct: 118 TKGRMREFYQCDFDIAGTYDPMLPDAEVLRIITEVFEGLGWNGGYTIKLNHRKILDGIFQ 177

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  D    +   +  A+DKLDK     V+  + E              L  E  D +
Sbjct: 178 VCGVPED----KIRTISSAVDKLDKLPWADVRKEMTEE-----------KGLDGEVADRI 222

Query: 241 VSFLSIDLEKSMHELY---ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ +  ++ + +     E +    + +KG  +L ++ E +       +R+    ++ R
Sbjct: 223 GEWVVLKGKQDLLKKLQSTESLAANESMKKGMEDLELLFEYLEAFNCL-DRVSFDLSLAR 281

Query: 298 GLEYYTGCVYEAILGFPVMN--------------------------EKQKPVVFGSVGGG 331
           GL+YYTG +YE +                                      V  GSV  G
Sbjct: 282 GLDYYTGLIYEVVTQGSAPEVTPGQENTDSKPSKKKGKKGGEDDDRSDDPTVGVGSVAAG 341

Query: 332 GRYDGLVSRFK-GQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDHDSDS 389
           GRYD LV  F     +P  G S G+ R+    K+ L +  +       V +  M      
Sbjct: 342 GRYDNLVGMFSGKSQIPCVGISFGVDRIFSITKAKLAAEKSAAVRSNDVDVYVMAFGKGF 401

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +       L  AGI+AE           Q K A+    P AI  G  E + G ++IK+
Sbjct: 402 LKERMSVCAKLWEAGIKAEFLYKVKPKLPAQFKAAEANGVPFAIFLGDDEVASGKVKIKE 461

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           +  G +     K            I +   ++   +K  LQ  +E
Sbjct: 462 M--GLQEGHPEKE----------GILVSQEDMAKEIKVRLQRKRE 494


>gi|167037448|ref|YP_001665026.1| histidyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115862|ref|YP_004186021.1| histidyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|229558738|sp|B0K977|SYH_THEP3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166856282|gb|ABY94690.1| histidyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928953|gb|ADV79638.1| histidyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 418

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 105/465 (22%), Positives = 186/465 (40%), Gaps = 50/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E      I   IR I + YGF  I TP  E+++   + + +  D 
Sbjct: 1   MLTKAPRGTKDILPSESYKWQYIEGLIREICDVYGFKEIRTPGFEHTELFLRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+L+ + T+P  R   E+       P + Y I PV+R E+   GR
Sbjct: 61  VRKEMYTFTDKGGRSITLKPEGTSPAVRAFIEHNLYAETQPTKLYYITPVYRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q  V+  G+ + +ADAE+  +    L+ +G+   +  I      +     +    
Sbjct: 121 LREHHQFGVEIFGAKSASADAEVISVAMTLLKKLGLNNLELRINSVGCPVCR---KNYNK 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              + L   L  L   D   ++ +  +++L  +          +     ++   ++  +L
Sbjct: 178 VLKEFLKNNLEYL-CDDCKVRYEINPLRVLDCK---------VESCQRITKDAPLITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +    EL + +                               I   IVRGL+YYT 
Sbjct: 228 CDDCKSHFEELQKYLD-----------------------IMGYDYIIDPRIVRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E I         +     G+V GGGRYDGL+    G ++P  GF +G+ RL++ L+ 
Sbjct: 265 TAFEII--------SKDIGAQGTVCGGGRYDGLIEECGGPSMPGVGFGMGLERLLITLEQ 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  I +   V +       ++          LR  G++ E      ++   Q+KYA
Sbjct: 317 NGI---EIPKPEGVDLFIAYVGEEAKLFTFALANKLRFNGLKVERD-NMDRSLKAQMKYA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           ++ N   AI+ G  E     +++KD+  G E+   I   E   + 
Sbjct: 373 NKLNAKFAIVIGEEEMKENKVKLKDMRVGSEVEISIDEIEQRIKN 417


>gi|126290821|ref|XP_001377063.1| PREDICTED: similar to Histidyl-tRNA synthetase-like [Monodelphis
           domestica]
          Length = 510

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 120/476 (25%), Positives = 214/476 (44%), Gaps = 26/476 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I + ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYNPRQMAVREKVFDVIISCFKRHGAEVIDTPVFELKETLTGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ ++LRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLALRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G          C+ +   + +  ++  D+ I +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGQFDPMIPDAECLKIICEILS-ALQLGDFLIKVNDRRILDGMFNVCG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK  + E              L SE  D + ++
Sbjct: 226 VPDS----KFRTICSSVDKLDKMSWENVKNEMVEE-----------KGLASEVADHIGAY 270

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +      S+ E       +       +G  +L ++ E +   G    +I    ++ RGL+
Sbjct: 271 VKQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGIAE-KISFDLSLARGLD 329

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L      + ++ +  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+
Sbjct: 330 YYTGVIYEAVLLQSPTQQGEEALGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI 389

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    ++          +         L +       L   GI+AE+    +    
Sbjct: 390 FSIVEQRMEASEEKVRTTETQVLVAAAQKKLLEERLKLVAELWDRGIKAELLYKKNPKLL 449

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            QL+Y +    PL  I G  E   G+++++ +A  +E+    +N       R +Q 
Sbjct: 450 TQLQYCEETGIPLVAIIGEQELKDGVIKLRCVASREEVDVRKENLVEEIRKRTSQY 505


>gi|119775498|ref|YP_928238.1| histidyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166228611|sp|A1S862|SYH_SHEAM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|119767998|gb|ABM00569.1| histidyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 424

 Score =  267 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 107/501 (21%), Positives = 192/501 (38%), Gaps = 89/501 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R+    +G+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPNQSPVWQKLEAVLRDAVAAFGYSEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R +  GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYTGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G ++   DAE+ M+     + +G+            D      
Sbjct: 117 PQKGRYRQFHQFGVEVYGIASADIDAEVLMLSNMLWQKLGLTEHVVLEINTLGDSDERAA 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE      D+            D   +     +++L  +     +       
Sbjct: 177 YRDALIAFLEVHKDKLDE------------DSQRRMYSNPLRVLDTKNPEIQA------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    ++ +L  + +     L EL+                            + +
Sbjct: 218 --ILADAPALMDYLGEESKSHFSTLRELLDA-----------------------VGIQYR 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G++ PA G
Sbjct: 253 VNPRLVRGLDYYNRTVFEWVT--------DSLGAQGTVLAGGRYDGLVGQLGGKDTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ R+++ L++LE + +       V +         +         LR A  G+R  
Sbjct: 305 FAMGLERIVLLLETLELAKDVPAA---VDVYVTAMGDSCVPAAFAIANELRVALPGVRIM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q+K AD+    LA+I G  E + G + IK L                  
Sbjct: 362 THCGGG-NFKKQIKRADKSGAALALIIGDNELAEGKVAIKPLR----------------- 403

Query: 469 ARVAQITIPISELVSTVKKIL 489
               Q  +    L  T+K ++
Sbjct: 404 NDNEQQLVAREALAETIKALI 424


>gi|20807682|ref|NP_622853.1| histidyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|32130121|sp|Q8RAI8|SYH_THETN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|20516230|gb|AAM24457.1| Histidyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 417

 Score =  267 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 105/469 (22%), Positives = 193/469 (41%), Gaps = 58/469 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E      + + +R I E YG+  I TP  E+++   + + +  D 
Sbjct: 1   MLTKAPRGTKDVLPSESYKWQYVENLMREICEFYGYKEIRTPGFEHTELFLRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+L+ + T+P  R   E+       P + Y I PV+R EK   GR
Sbjct: 61  VRKEMYTFNDRSGRSITLKAEGTSPAVRAFIEHGLYAETQPTKLYYITPVYRYEKPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI----GINNRKILDGILE 180
            R+  Q  V+  G+ + +ADAE+  +    L+ +G+   +  I        RK  + +L+
Sbjct: 121 LREHHQFGVEIFGAKSASADAEVISIAMTLLKKLGLNNLELRINSVGCPVCRKNYNKVLK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D+L          D   ++ +  +++L  +          +     + +  ++
Sbjct: 181 EFLKEHLDEL--------CDDCKVRYEVNPLRVLDCK---------VESCRRVTGEAPLI 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             +L  D      EL + +                               +   IVRGL+
Sbjct: 224 TDYLCDDCRNHFEELKKYLDA-----------------------MGYDYIVDPRIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E I         +     G+V GGGRYDGL+    G ++P  GF +GI RL++
Sbjct: 261 YYTKTAFEII--------SKDIGAQGTVCGGGRYDGLIEECGGPSMPGVGFGMGIERLLL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+          E   + I  +  ++   +        LR  G++ E+     ++   Q
Sbjct: 313 TLE-QNGIEIPKPEGPDLFIAYIGDEAKLFT--FTLANKLRFNGLKVEIDHME-RSLKAQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +KYA++ N   A++ G  E     +++K++A G+E    I   E   + 
Sbjct: 369 MKYANKLNAKFAVVIGEEELESKKVKLKNMATGEETEILIDEIEKAIKN 417


>gi|205353621|ref|YP_002227422.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|229558728|sp|B5RCZ1|SYH_SALG2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|205273402|emb|CAR38377.1| Histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326628721|gb|EGE35064.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 424

 Score =  267 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 182/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMKDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D  +    L +L+            L                  
Sbjct: 216 QALLNDAPALGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   + + S      + LR    G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+ +  +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWDARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|290968830|ref|ZP_06560367.1| histidine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781126|gb|EFD93717.1| histidine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 422

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 101/465 (21%), Positives = 183/465 (39%), Gaps = 50/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D   ++      +   IR I   Y F  I TPL E ++   + + +  D 
Sbjct: 1   MAITAPRGTQDFLPEQTAEWQMLEAKIRRICALYEFGEIRTPLFENTELFLRGIGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGR 124
             K +++  D  G+ ++LR + TA + R   E+           Y +GP+FR+++   GR
Sbjct: 61  VTKEMYTFVDRGGRSMTLRPENTASVVRSFLEHKLYGEQKVHKFYYMGPMFRHDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q  V+ +GS     DAE+  +       +G+                        
Sbjct: 121 YRQFNQFGVEAIGSKDPAVDAEIISLAFQLFRELGL------------------------ 156

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                     +VL              +  L +   D             E+  + V   
Sbjct: 157 --------NDLVLHLNSVGCPSCRPIYRQKLLDFFADKKESLCDDCRERLEKNPLRVLDC 208

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D EK M+    L+   +  E   +    + + ++  G           +VRGL+YYT 
Sbjct: 209 KADGEKMMNMGVPLITEHL-CESCQSHFQQVQQYLQAVGIP---FVKDPRLVRGLDYYTN 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +                +V GGGRYDGL++   G + P  GF++G+ RL++ LK 
Sbjct: 265 TAFEIMYA--------PLGAQSTVCGGGRYDGLIAEVGGPSTPGIGFAVGMERLLLTLKE 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               T     +G   I  +     + +K  +  Q LR   I AE+ L   ++   Q+K A
Sbjct: 317 QGLLTVP---VGVPPIFIVALGEAARAKAFVLQQALRARQIAAEIDL-MGRSMKGQMKAA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           ++      +I G  E +R  +Q++++   ++++  +    ++ E+
Sbjct: 373 NKAGAWYTVIIGEEELARQEVQVRNMMTKEQIAVPMNELVTYMES 417


>gi|297616960|ref|YP_003702119.1| histidyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144797|gb|ADI01554.1| histidyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 421

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 99/487 (20%), Positives = 191/487 (39%), Gaps = 68/487 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D    E R    +   +R   E YGF  I TP+ E+++   + + +  D 
Sbjct: 1   MSITGPRGTYDILPDESRKWQWLEGLLRETAELYGFREIRTPVFEHTELFQRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + ++LR + TA  AR   ++       P + Y +GP+FR ++   GR
Sbjct: 61  VQKEMYTFADKARRSLTLRPEGTASCARAFIQHQIYNQPQPVKWYYLGPMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q   +  GS+    DAE+ +MM D +   G+ + D  +     +       +  +
Sbjct: 121 YRQFHQFGAEVFGSNNPFVDAELIVMMVDMVFKAGLPQYDLRLNSVGCETCRPSYRQALV 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                + + L      D   +  L  +++L  +          +G       +  +  + 
Sbjct: 181 SFLQPIKKEL----CQDCRKRIELNPLRVLDCKN---------QGCREAVTGLPRVADYW 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D  +    + + +          + L                       VRGL+YYT 
Sbjct: 228 CNDCRQHFTAVTQSLDRYEVSYTVDDRL-----------------------VRGLDYYTN 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++               ++GGGGRY+ LV    G +VP  GF+IG+ RL+  ++ 
Sbjct: 265 TAFELLVPG--------IGAQNAIGGGGRYNHLVREVGGPDVPGIGFAIGLERLLSGVEE 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +      +   + +       +  +      + LR AG++A+      ++   Q++ A
Sbjct: 317 AGALPVFSPD---IEVYIAVTGREYEASADQALRELRRAGLKADRDY-MGRSLKAQMRQA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           DR   P+ ++ G  E +RG   I+ +   ++                    I  ++L+  
Sbjct: 373 DRLQVPVVVLIGEDEATRGTYTIRRMQTKEQ------------------YEIGQADLIDE 414

Query: 485 VKKILQE 491
           V+KIL +
Sbjct: 415 VRKILVK 421


>gi|188585917|ref|YP_001917462.1| histidyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229558698|sp|B2A2F9|SYH_NATTJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|179350604|gb|ACB84874.1| histidyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 421

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 101/466 (21%), Positives = 201/466 (43%), Gaps = 51/466 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + PRG  D   +E    + + ++ + I   YGF+ +  P+ E+++   + + +  D 
Sbjct: 1   MLTKAPRGTKDILPQESSKWHALEETAKKISNLYGFNEVRFPIFEHTELFTRSVGETSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
            +K +++  D   + ++LR + TAP AR   E+       P + Y IGP+FR ++   GR
Sbjct: 61  VSKEMYTFTDRGDRSLTLRPEGTAPAARLYVEHKLFNEPQPVKYYYIGPMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK-ILDGILEKIG 183
           +RQF Q  V+  GS     D E+  ++ D  EA+G+   +  +     K      L ++ 
Sbjct: 121 YRQFHQFGVEVFGSLEPETDVEVMKLLLDYFEALGLSGLELKLNSVGCKECRQKYLNELS 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            + + K++         D   ++    +++L  + ++              E + ++V++
Sbjct: 181 NYFEGKIDHI-----CQDCYQRYQTNPMRVLDCKKKSCREA--------IGEDVPLIVNY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D      ++ E++                              +I   +VRGL+YYT
Sbjct: 228 LCQDCATHFDKVKEILTSLNL-----------------------PYQIDPHLVRGLDYYT 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E ++               ++GGGGRYD LV    G   P  GF++G+ R+++AL+
Sbjct: 265 KTAFEVVMPS--------LGAQDALGGGGRYDYLVEECGGPPTPGVGFAVGLERILLALE 316

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E + +  +++    I T     ++  +       +R  G  A M     ++   Q+K 
Sbjct: 317 QKEINLDQEEKLDFYFIAT---GEEAKQEAFKLLATVREEGYSAVMDF-ERRSMRAQMKR 372

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           A++ N   ++I G  E +    QIKD+  G++    +K+ E   + 
Sbjct: 373 ANKANARFSLILGEAELNEQTCQIKDMEAGEQFQVPLKSFEERIKE 418


>gi|291223042|ref|XP_002731518.1| PREDICTED: histidyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 503

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 126/489 (25%), Positives = 219/489 (44%), Gaps = 44/489 (8%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K   + P+G  D   K++ +R  +  +I + ++ +G + I+TP+ E  ++L     ++ 
Sbjct: 50  QKFILKCPKGTRDFDPKQMSVREGVFKTIIDSFKRHGAETIDTPVFELKETLTGKYGED- 108

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K ++ L D  G+ +SLRYDLT P ARY+A    + +             N     GR
Sbjct: 109 --SKLIYDLADQGGELLSLRYDLTVPFARYLAMKKISNIKRYHIA-KVYRRDNPAMTRGR 165

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           FR+F QCD D  G + +    ++ ++   +     ++  D+ I +N+R+ LDG++   G+
Sbjct: 166 FREFYQCDFDIAG-AYDPMIPDVEVLKIVSEILSNLQIGDFEIKVNHRRFLDGMMACCGV 224

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D    +   +  +IDKLDK     V+  + +              L     D +  ++
Sbjct: 225 PED----KFRAICSSIDKLDKTFWADVRAEMVDE-----------KGLDPAAADKIEKYV 269

Query: 245 SIDLEKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +     +    +  E +       +   E+ V+ +         +++K   ++ RGL+Y
Sbjct: 270 KLRGRTELVEELQKDENLLKNTDAVEALEEMKVLFKYCDIMNIT-DKVKFDLSLARGLDY 328

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ--NVPATGFSIGISRLI 359
           YTG +YE IL  P  +   + V  GSV GGGRYDGLV  F  +   VP  G SIGI R+ 
Sbjct: 329 YTGLIYEGILKGPEASTPGEAVSVGSVAGGGRYDGLVGMFDPKGKKVPCVGVSIGIERIF 388

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             +++   + N +       +       D L +       L TA I+AEM    +    +
Sbjct: 389 SIMEAKLQAENAVIRTTETQVLVASAQKDLLEERMKLCNELWTADIKAEMSYKKNPKILS 448

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           QL+YA+    P   I G  E  +G+++IKD +  +E+                   IP +
Sbjct: 449 QLQYAEDSGIPYVAIIGGDEIEKGVVKIKDTSTREEV------------------EIPRA 490

Query: 480 ELVSTVKKI 488
           ELVS ++K 
Sbjct: 491 ELVSEIRKR 499


>gi|260893520|ref|YP_003239617.1| histidyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865661|gb|ACX52767.1| histidyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 429

 Score =  266 bits (680), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 114/472 (24%), Positives = 205/472 (43%), Gaps = 50/472 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           MGK       LP G  D   +EI   + + D IR + E Y F  I TP+ E +    + +
Sbjct: 1   MGKPD---FRLPPGVKDILPEEIPKWHYLEDIIRELAELYRFREIRTPIFEMALLFQRGV 57

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K ++  +D  G+ ++LR + TAP+AR   E+       P + Y +GP+FR++
Sbjct: 58  GEATDIVVKEMYIFKDRGGRELALRPEGTAPVARAYVEHGLHTRPQPLKLYYVGPMFRHD 117

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR RQF Q   +  G+    ADAE+  ++A+ L   G+K  +  +      +    
Sbjct: 118 RPQMGRNRQFHQFGAEIFGAPGPAADAEVIFLLAEFLRRAGVKDWELELNSVGCPVCR-- 175

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
             ++    ++ L +    L   D   +     +++L  + + D+     + A        
Sbjct: 176 -PQLVAALEEYLGKHASSL-CPDCRQRLERNPLRVL--DCKEDSCRQVVQQAPTP----- 226

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             + +L    E     + E +                              +++  +VRG
Sbjct: 227 --LDYLCSRCESHFRGVQEELCSL-----------------------GVPFRLNPRLVRG 261

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG  +E +          +     ++GGGGRYD LV    G + P  GF++G+ R+
Sbjct: 262 LDYYTGTAFEVLSP--------RLGAQNALGGGGRYDYLVEECGGPSTPGVGFAVGLERV 313

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL+  E S    +E+    +     D +   +   + ++LR+AG+ A+    S +   
Sbjct: 314 LLALEKQEDSPLPKEEVRR-GVFIAAADEEGRKRQAYWLRLLRSAGLPADRDYASGRGLR 372

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            QLK ADR     A+I G  E  RGM++++DL  G+++        +W   +
Sbjct: 373 AQLKQADRHRARWALILGAEELGRGMVRLRDLESGEQVDLPETEVIAWLRQK 424


>gi|82544963|ref|YP_408910.1| histidyl-tRNA synthetase [Shigella boydii Sb227]
 gi|123741953|sp|Q31XX6|SYH_SHIBS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|81246374|gb|ABB67082.1| histidine tRNA synthetase [Shigella boydii Sb227]
 gi|320185214|gb|EFW59994.1| Histidyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|332092796|gb|EGI97865.1| histidyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 424

 Score =  266 bits (680), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 187/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDLNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S      + LR    G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADPIVDIYLVASGADTQSAAMALAERLRDELQGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 366 GG-NFKKQFARADKWGARVAVVLGESEVTNGTAVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|163749556|ref|ZP_02156803.1| histidyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161330666|gb|EDQ01603.1| histidyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 424

 Score =  266 bits (680), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 108/497 (21%), Positives = 192/497 (38%), Gaps = 81/497 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R     YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKLETVLRETVSAYGYSEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   ++        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFDDRNGDSLTLRPEGTASTVRAGNQHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G      DAE+ M+ A   E +GI  +     +       R  
Sbjct: 117 PQKGRYRQFNQFGVEVYGIGTADVDAEVLMLSARLWEKLGISDHVTLELNTLGDPAERAA 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        ++L+E        +   +     +++L  +            A    
Sbjct: 177 YREALIAYLEPFKEQLDE--------ESQRRMYTNPLRVLDTK--NPEVQALLVDA---- 222

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L  +       L EL+                            +  I+  
Sbjct: 223 ---PELMDYLGEETRAHFSHLCELLDA-----------------------VGIKYVINPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+N PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTTS--------LGSQGTVLAGGRYDGLVEQLGGKNTPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R+++ L++LE + +       V +        S        Q LR    G+R  M   
Sbjct: 309 LERIVLMLETLELTDDI---PATVDVYVTAMGDASKVAAIKIAQALRRELPGLRV-MSHC 364

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              NF  Q+K AD+    +A+I G  E +   + +K L + KE                 
Sbjct: 365 GGGNFKKQMKRADKSGALIALIIGEDELASNQVAVKYLREKKE----------------- 407

Query: 473 QITIPISELVSTVKKIL 489
           Q  +    L + + +++
Sbjct: 408 QALVARDGLAAYIAELI 424


>gi|205374219|ref|ZP_03227018.1| histidyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 421

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 101/468 (21%), Positives = 183/468 (39%), Gaps = 51/468 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D     +     I +  ++I  N+ +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIKIPRGTQDILPGTVEKWQYIEEVAKDICRNFQYKEIRTPIFEHAELFTRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D   + +SLR + TA + R   EN        P + +  GP+FR E+   G
Sbjct: 61  VQKEMYTFKDRGDRDLSLRPEGTAAVVRSFVENKMFGHANQPVKLFYSGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF+Q  V+ +GS     DAE+  +     +AVG+K+    +    + +      E +
Sbjct: 121 RYRQFVQFGVEALGSEDPAIDAEVISLAMSLYQAVGLKKLKLIVNSLGDNESRVAHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H   ++ E        D   +     +++L  +   D+    T            ++ 
Sbjct: 181 IAHFKPRIEEF-----CTDCQTRLEKNPLRILDCKKDRDHELMAT---------APSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++   +                               +  T+VRGL+YY
Sbjct: 227 YLNEESRSYFKKVQSYLS-----------------------LMDVEFVVDPTLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +                ++ GGGRY+GLV    G + P  GF++ I RL+ A+
Sbjct: 264 NHTAFEIMSDAEGF------GAITTLCGGGRYNGLVEEIGGPSTPGIGFALSIERLLAAV 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            + E     +     V    +     +          LR AG+ AE      +    Q K
Sbjct: 318 DAEEV---ELPVESKVDCYVVALGDQAKDYSVKIVSDLRKAGLSAERDY-LDRKLKAQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR       + G  E S G + +KD+  G++ S EI       + R
Sbjct: 374 AADRVQARYVAVLGEEELSSGTINLKDMESGEQESIEISKLVEAIQER 421


>gi|120598179|ref|YP_962753.1| histidyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146293747|ref|YP_001184171.1| histidyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166228615|sp|A4Y8T9|SYH_SHEPC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166228617|sp|A1RHQ4|SYH_SHESW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|120558272|gb|ABM24199.1| histidyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145565437|gb|ABP76372.1| histidyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|319427121|gb|ADV55195.1| histidyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 425

 Score =  266 bits (679), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 103/478 (21%), Positives = 192/478 (40%), Gaps = 65/478 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R+    YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKVEAVLRSSVSAYGYSEIRTPIVENTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G  +   DAE+ M+ A   E +GI  +     +       R  
Sbjct: 117 PQKGRYRQFHQFGVEVYGIGSADIDAEVLMLSARLWEKLGISEHVTLELNTLGDPAERAA 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +                 
Sbjct: 177 YRDALIAFLEQHKDKLDE--------DSQRRMYSNPLRVLDSKDPQVQG---------IL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L  +  +   +L EL+                            + +++  
Sbjct: 220 TDAPALMDYLGEESSQHFAQLRELLDA-----------------------VGIQYRVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV++  G++ PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTNS--------LGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R+++ L++L            V +       + L +     Q LR+A   ++  M   
Sbjct: 309 LERIVLLLETLGL---TQDIPAAVDVYVTAMGENCLVEAIKVAQELRSALPHLKV-MSHC 364

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREA 469
              N   Q+K AD+    +A++ G  E + GM+ +K L    ++         ++   
Sbjct: 365 GGGNVKKQMKRADKSGASVALLIGEEELAEGMVTVKHLRNDNEQQQVARNALSAFLAE 422


>gi|205360461|ref|ZP_02683413.2| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205349561|gb|EDZ36192.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 445

 Score =  266 bits (679), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 103/473 (21%), Positives = 179/473 (37%), Gaps = 68/473 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + + +  D  
Sbjct: 25  NIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVV 84

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+   GR+R
Sbjct: 85  EKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYR 144

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDG 177
           QF Q   +  G      DAE+ M+ A    A+G                   N R  L  
Sbjct: 145 QFHQLGAEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARANYRDALVA 204

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE+     D+            D   +     +++L  +                    
Sbjct: 205 FLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDVQALLNDA 243

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  +L  D  +    L +L+            L                       VR
Sbjct: 244 PALGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL-----------------------VR 280

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ R
Sbjct: 281 GLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLER 332

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           L++ ++++            V I  +   + + S      + LR    G++     G   
Sbjct: 333 LVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTNHGGG- 388

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 389 NFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 441


>gi|319651676|ref|ZP_08005803.1| histidyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396743|gb|EFV77454.1| histidyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 424

 Score =  266 bits (679), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 94/462 (20%), Positives = 183/462 (39%), Gaps = 49/462 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E+     I +  R + E + +  I TP+ E+++   + + D  D 
Sbjct: 1   MSIRIPRGTQDILPGEVEKWQLIEEKARELCEKFQYREIRTPIFEHTELFLRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA   R   E+        P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFEDRGGRSLTLRPEGTASAVRSFVEHKMYGDASQPVKLYYMGPMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           RFRQF+Q  V+ +GS+    DAE+  +      ++G+++    +     K       +  
Sbjct: 121 RFRQFVQFGVEAIGSADPAIDAEVIALAMSLYRSMGLQKLKLIVNSLGDKESRSAHREAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           ++         I     D  ++     +++L  + + D   +         +    ++ +
Sbjct: 181 VNH----FMPRIGEFCQDCQNRLEKNPMRIL--DCKQDREHELM-------KSAPSIIDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ D +    ++ + +K                              +   +VRGL+YY 
Sbjct: 228 LNDDSKTYFEKVQKYLKNLDID-----------------------FIVDPNLVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E       M++ +      ++ GGGRY+GL     G   P  GF++ + R I AL+
Sbjct: 265 HTAFEI------MSDSEGFGAITTLCGGGRYNGLTEEIGGPEAPGIGFALSVERFIAALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           + +      K++   L+       ++        Q LR AG  AE      +    Q K 
Sbjct: 319 AEKVDLPLNKDIDCYLV---SLGEEAKDYTVGLLQKLRMAGYSAERDY-LDRKIKAQFKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           ADR N     + G  E     + +K +  G++    + +   
Sbjct: 375 ADRSNAKFVAVLGEDELKANKINVKSMESGEQTELGLDSFIE 416


>gi|329297581|ref|ZP_08254917.1| histidyl-tRNA synthetase [Plautia stali symbiont]
          Length = 424

 Score =  265 bits (678), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 102/473 (21%), Positives = 185/473 (39%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAIWQRIEGTLKQVLASYGYSEIRLPIVEQTPLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G      DAE+ M+     +A+GI  +     +    ++ R  
Sbjct: 117 PQKGRYRQFHQMGVEVFGLQGPDVDAELIMLTHRWWKALGIADHVELELNSIGSLDARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L       ++ L+E        D   +     +++L  +                 
Sbjct: 177 YRSALVAFLEQHEEVLDE--------DCKRRMYTNPLRVLDSKN---------PDIQTLL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  FL  +  +    L  L+                            + +I+  
Sbjct: 220 NDGPTLGEFLDEESREHFSGLCALLDDA-----------------------GIKYRINQR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V GGGRYD LV +  G+  PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTSS--------LGSQGTVCGGGRYDSLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLG 412
           + RL++ ++++       +    V +  +       S      + LR A   ++     G
Sbjct: 309 LERLVLLVQAVN---PEFEPTRIVDVYVIASGQGVQSAAMQLAEKLRDADPALKLMTNFG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q   AD+    +A++ G  E   G + IKDL  G + +    +  +
Sbjct: 366 GG-NFKKQFARADKWGARIALVLGEDEVKAGQVVIKDLRTGDQQTLAQSDAAA 417


>gi|300717950|ref|YP_003742753.1| Histidyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299063786|emb|CAX60906.1| Histidyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 424

 Score =  265 bits (678), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 104/477 (21%), Positives = 182/477 (38%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI   ++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPAETVVWQRIEQILKQVLASYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G+ ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ MM A   +A+G                   N
Sbjct: 117 PQKGRYRQFHQMGVEVFGLQGPDVDAELIMMTARWWKALGISEHVKLELNSIGSLEARTN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALIAFLEQHQDVLDE------------DCKRRMYTNPLRVLDSKN---------PDI 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  +  +    L EL+            L                  
Sbjct: 216 QALLNAAPELSEYLDAESREHFAGLCELLDSAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTTS--------LGSQGTVCGGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAE 408
           F++G+ RL++ ++++       +    V +  +       S      + +R A   ++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFEPTRIVDVYVIASGQGVQSAAMQLAEQIRDADPTLKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              G   NF  Q   AD+    +A++ G  E + G + IKDL  G++ +   ++  +
Sbjct: 362 TNFGGG-NFKKQFARADKWGARVALMLGEDEVANGQVTIKDLRNGEQQTLAQRDAAA 417


>gi|160932389|ref|ZP_02079779.1| hypothetical protein CLOLEP_01224 [Clostridium leptum DSM 753]
 gi|156868348|gb|EDO61720.1| hypothetical protein CLOLEP_01224 [Clostridium leptum DSM 753]
          Length = 442

 Score =  265 bits (678), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 103/457 (22%), Positives = 188/457 (41%), Gaps = 56/457 (12%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           PRG  D   KE      + D++R I   YGF  I TP+ E+++   + + +  D   K +
Sbjct: 17  PRGTQDVLPKESYQWQVVEDAMRRICSAYGFKEIRTPVFEHTELFQRSVGETTDVVQKEM 76

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++ QD  G+ I+LR + TA   R + E+       P + Y     +R EK   GR R+F 
Sbjct: 77  YTFQDKGGRSITLRPEGTAGAVRAMVEHGLYNDALPIKAYYFTSCYRYEKPQAGRLREFH 136

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILEKIGLH 185
           Q  V+  G+ A +ADAE+  +     + +G+K      +       R      L++    
Sbjct: 137 QFGVEVFGAGAPSADAEVICLAKSVFDVLGVKNLSLEINSIGCPKCRAEYHKALKEYFQG 196

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D+L E          L +     +++L  +             +  +E   +M+ +L 
Sbjct: 197 YQDQLCETC--------LGRLNRNPMRILDCKSPV---------CSKIAEGAPVMLDYLC 239

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +  +    +   +                               ++ TIVRGL+YYT  
Sbjct: 240 GECREHFEGVKTCLD-----------------------TMGIAYTVNPTIVRGLDYYTKT 276

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +               G+V GGGRYDGLV    G ++P+ GF +G+ RL++ L   
Sbjct: 277 VFEFVSTG--------IGAQGTVCGGGRYDGLVEEIGGPSMPSLGFGLGLERLMLVLAQP 328

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +S+   +       +        + ++     +++RT  + AE  L   ++   Q+KYAD
Sbjct: 329 DSALAAVTPPTC-DLYVASLGDKAKAQAFRLAELVRTTSLNAECDL-VGRSLKAQMKYAD 386

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           +     +++ G  E      ++K++A G++    +  
Sbjct: 387 KLGAKFSLVLGDSELEEQKAKVKNMATGEQKEISLGE 423


>gi|297584745|ref|YP_003700525.1| histidyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297143202|gb|ADH99959.1| histidyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 429

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 95/466 (20%), Positives = 182/466 (39%), Gaps = 51/466 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +  +PRG  D    E      I +  R++   Y +  I TP+ E ++   + + D  D  
Sbjct: 5   KYSIPRGTQDILPGESEKWQYIENKARDLCARYRYREIRTPMFEQTELFARGVGDTTDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVA---ENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            K +++ +D  G+ ++LR + TA   R       +      P + + IGP+FR E+   G
Sbjct: 65  QKEMYTFEDKGGRSLTLRPEGTASTVRSFVDQKMHGWA-DQPVKLFYIGPMFRYERPQSG 123

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF+Q  V+ +GSS    DAE+  +  D    +G+K     +     +          
Sbjct: 124 RMRQFVQFGVEAMGSSDPAIDAEVIGLAMDFYRELGLKGVKLVLNSLGDQESRENHRNAL 183

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +   + +   L      D   +     +++L  +   D+                 ++ +
Sbjct: 184 ISHFEPVIGEL----CSDCQARLEKNPLRILDCKKDRDHEKMA---------AAPSILDY 230

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+                    E+       +   +   G      ++   +VRGL+YY 
Sbjct: 231 LN--------------------EESKAYFETVKSYLEAMGIP---YEVDPGLVRGLDYYN 267

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E ++               ++ GGGRY+GLV    G   P  GF++ I RL++AL+
Sbjct: 268 NTAFEIMIDGEGF------GAITTLMGGGRYNGLVEEIGGPETPGIGFALSIERLLMALE 321

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           S   +      +   ++   D     +         LR+AG+  +     ++    Q+K 
Sbjct: 322 SQGITLPVNHGIDAYMVALGDAAKAHVP---KLVHELRSAGLSVDTDY-LNRKMKGQMKA 377

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           A R +   A+I G  E   G +++K +  G + + +I    ++ +A
Sbjct: 378 AGRLHARYALILGDEELEAGTIEVKHMETGNQETIQISELAAYLQA 423


>gi|54307959|ref|YP_128979.1| histidyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|50403647|sp|P62373|SYH_PHOPR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|46912385|emb|CAG19177.1| putative histidyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 422

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 110/494 (22%), Positives = 192/494 (38%), Gaps = 84/494 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   +  +  ++  +I+ +   YG++ I  P++E +    + +
Sbjct: 1   MAKQ----IQAIRGMNDCLPTQSALWQKVEGTIKQVVSAYGYNEIRMPIVESTHLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   +N        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIQNGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ MM A     +G                    
Sbjct: 117 PQKGRYRQFHQVGVEVFGLNGPDVDAELIMMTARLWRELGINQHVRLELNSIGSLDARAT 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   LE+     D+            D   +     +++L  +       +    A
Sbjct: 177 YREALIAFLEQHLEVLDE------------DCKRRMHTNPLRVLDTK--NPAVQEILVDA 222

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D +     L EL+       +    L                  
Sbjct: 223 -------PKLSEYLDDDSKAHFAGLCELLDAAGIEYQVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++LE +         V    +     ++       + LR    G+R  
Sbjct: 305 FAMGVERLVLLMETLELADVRRS----VDAYVVTVGEGTMMAGMKLAEKLRENVPGLRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q K AD     +A++ G  E +   + +KDL  G++ +           
Sbjct: 360 MNHFGGGNFKKQFKRADNVGAAIALVLGENEIADNTVVVKDLRGGEQTTMA--------- 410

Query: 469 ARVAQITIPISELV 482
               ++T  ++EL+
Sbjct: 411 --QDEVTAKLAELI 422


>gi|197122762|ref|YP_002134713.1| histidyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|226737063|sp|B4UEL3|SYH_ANASK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|196172611|gb|ACG73584.1| histidyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 414

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 89/460 (19%), Positives = 169/460 (36%), Gaps = 51/460 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++    +G  D    ++   + +    R ++  YG+  + TP +E++    + + +  D 
Sbjct: 1   MKINGVKGMNDVLPADVARWHEMESVAREVFALYGYREVRTPAVEHAALFARGVGEATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            NK ++  +D   + ++LR + TA   R   E+   +  P + + +GP+FR E+   GR+
Sbjct: 61  VNKEMYVFEDKGEELLALRPEGTAGTVRAFIEHGAFVEGPQKWFYMGPMFRRERPQKGRY 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   +  G +    DAE   ++AD    +G+        + + +     L  +  +
Sbjct: 121 RQFHQIGCEAFGVAEPYLDAEQIALLADYFARLGVTAELKLNSVGDAQCRPAYLADLKAY 180

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                          D  D+     +++L  +          +      EQ   ++  L 
Sbjct: 181 L-----VANQGALCADCKDRIERNPLRVLDCK---------VESCQPVLEQAPQLLERLC 226

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                   ++   +                              ++   +VRGL+YY   
Sbjct: 227 EPCRTHFDQVKAGLDALGVA-----------------------YRVEPRLVRGLDYYVRT 263

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            YE                  +V GGGRYD LV    G   P  GF++G  RL + L+ +
Sbjct: 264 AYEFT--------SDALGSQSAVAGGGRYDRLVETLGGPPTPGIGFALGEERLSMILEKV 315

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +    +      +  +  D+    +       LR AGI  E+     K    Q K A+
Sbjct: 316 GRAMPERRP----AVFFVSADATGALEALRLAAGLRRAGIACELDPRGGK-LKAQFKQAE 370

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           R     A++ G  E + G  ++KDL   +E    +    +
Sbjct: 371 RVGARWAVVLGGNEVATGQAKLKDLQTREETPVALSELAA 410


>gi|126175191|ref|YP_001051340.1| histidyl-tRNA synthetase [Shewanella baltica OS155]
 gi|153001517|ref|YP_001367198.1| histidyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217972554|ref|YP_002357305.1| histidyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304410034|ref|ZP_07391653.1| histidyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302253|ref|ZP_07582011.1| histidyl-tRNA synthetase [Shewanella baltica BA175]
 gi|166228612|sp|A3D6V8|SYH_SHEB5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166228613|sp|A6WQP6|SYH_SHEB8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|254782344|sp|B8E9S8|SYH_SHEB2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|125998396|gb|ABN62471.1| histidyl-tRNA synthetase [Shewanella baltica OS155]
 gi|151366135|gb|ABS09135.1| histidyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217497689|gb|ACK45882.1| histidyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304351443|gb|EFM15842.1| histidyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306914291|gb|EFN44712.1| histidyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 426

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 111/500 (22%), Positives = 199/500 (39%), Gaps = 89/500 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R+    YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKVEAVLRSSVSAYGYSEIRTPIVENTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D++G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFADNNGDSLTLRPEGTASTVRAGNENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ M+ A   E +GI            D      
Sbjct: 117 PQKGRYRQFNQFGVEVYGIGTADIDAEVLMLSARLWEKLGISDHVSLELNTLGDPAERAV 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  + +   +       
Sbjct: 177 YRDALIAFLEQHKDALDE------------DSKRRMYSNPLRVLDSKDQNVQA------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    ++ FL  + +    +L EL+                            +  
Sbjct: 218 --ILAGAPELMDFLGEESKTHFSQLRELLDA-----------------------VGIKYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V  GGRYDGLV++  G++ PA G
Sbjct: 253 INPRLVRGLDYYNRTVFEWVTSS--------LGSQGTVLAGGRYDGLVAQLGGKDTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ R+++ L++LE + +   E   V +         L +     Q LR+A   ++  
Sbjct: 305 FAMGLERIVLLLETLELNKDIPSE---VDVYVTAMGDSCLVEAIKIAQELRSALPNLKV- 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      N   Q+K AD+    +A++ G  E + GM+ +K L                  
Sbjct: 361 MSHCGGGNVKKQMKRADKSGASVALLIGEDELAEGMVTVKHLR----------------- 403

Query: 469 ARVAQITIPISELVSTVKKI 488
             + Q  +  S L + + ++
Sbjct: 404 NDIEQQRVARSALGAFLAEL 423


>gi|327537914|gb|EGF24613.1| histidyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 442

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 147/469 (31%), Positives = 230/469 (49%), Gaps = 34/469 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++    +GF D     +  R +++ + R ++ ++GF PI+TP LE+ + L       D  
Sbjct: 2   IQPRTLKGFRDYLPAAMIPREQLMQTAREVFRSFGFAPIDTPTLEHLEILT--GKGSDET 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ ++S +D+ G+ + +R+DLT PLAR+ A++  T+  P + Y I PV+R EK   GR+R
Sbjct: 60  DRQLYSFEDNGGRPVGMRFDLTVPLARFAAQHIGTLGTPFKRYHIAPVWRGEKPQEGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+QCD D +G+++E AD E   ++   L A+G   + + I INNR IL G+LE +GL  
Sbjct: 120 EFVQCDFDTIGTTSELADIEAVCVIDALLRAIG--IDAFTISINNRAILTGLLESLGLAD 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                    VLR++DKL K G +             + +  + A +T+EQ D ++     
Sbjct: 178 K-----TTPVLRSLDKLGKIGREK-----------TANEMVESAGVTAEQADAVLRLAEC 221

Query: 247 DLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           D +    +  L E+  G      G   L  I      SG + +R+KI  +I RGL+YYTG
Sbjct: 222 DGDAESILASLPEITGGNETAAAGIERLTQIYRGALASGVSPDRLKIDVSIARGLDYYTG 281

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++E  L         +    GSV  GGRYD L   +  Q++P  G S+G+ RL+ AL+S
Sbjct: 282 VIFETTL--------DELPGIGSVCSGGRYDNLAGLYTKQHLPGIGASLGLDRLLAALES 333

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L   +   K      +     D      Y      LR AGI  E++    K  G QLKYA
Sbjct: 334 LGRLSGVSKPCA---VFVPFFDKGHRDDYLKLASQLRDAGIGVEVYP-EPKKLGQQLKYA 389

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           D +   +AII G  E   G +Q+K LA  +       +          Q
Sbjct: 390 DSQGFAVAIIAGGNEWEAGTVQVKTLATKESQDVAYSHESPDALIEAIQ 438


>gi|255025792|ref|ZP_05297778.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 425

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 103/472 (21%), Positives = 188/472 (39%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+   Y ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKNVXXXYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R RQF Q  ++ +GS   + D E+  +  +    +G+      I     K       E +
Sbjct: 121 RQRQFTQMGIEALGSDDSSIDVEVISLAMEFFRKIGLTNIKLVINSLGDKESRLKHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  ++E        +   +     +++L  +   D         N   +    ++ 
Sbjct: 181 VAHFEPHIDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       +   +                              +I  T+VRGL+YY
Sbjct: 227 FLNEESVAYFENVKNYLNALE-----------------------IPFEIDPTMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL
Sbjct: 264 NHTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +     I    P+ +  +    ++  K       LR  GI AE      + F  QLK
Sbjct: 318 EKADI---EIPAKKPLDVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R+N    II G  E   G  Q+K++  G++ +               + 
Sbjct: 374 DANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLSNTKGEK 425


>gi|220917545|ref|YP_002492849.1| histidyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254782304|sp|B8JBF6|SYH_ANAD2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|219955399|gb|ACL65783.1| histidyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 414

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 89/460 (19%), Positives = 169/460 (36%), Gaps = 51/460 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++    +G  D    ++   + +    R ++  YG+  + TP +E++    + + +  D 
Sbjct: 1   MKINGVKGMNDVLPADVARWHEMEAVAREVFALYGYREVRTPAVEHAALFARGVGEATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            NK ++  +D   + ++LR + TA   R   E+   +  P + + +GP+FR E+   GR+
Sbjct: 61  VNKEMYVFEDKGEELLALRPEGTAGTVRAFIEHGAFVEGPQKWFYMGPMFRRERPQKGRY 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   +  G +    DAE   ++AD    +G+        + + +     L  +  +
Sbjct: 121 RQFHQIGCEAFGVAEPYLDAEQIALLADYFARLGVTAELKLNSVGDAQCRPAYLADLKAY 180

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                          D  D+     +++L  +          +      EQ   ++  L 
Sbjct: 181 L-----VANQGALCADCKDRIERNPLRVLDCK---------VESCQPVLEQAPRLLERLC 226

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                   ++   +                              ++   +VRGL+YY   
Sbjct: 227 EPCRAHFDQVKAGLDALGVA-----------------------YRVEPRLVRGLDYYVRT 263

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            YE                  +V GGGRYD LV    G   P  GF++G  RL + L+ +
Sbjct: 264 AYEFT--------SDALGSQSAVAGGGRYDRLVETLGGPPTPGIGFALGEERLSMILEKV 315

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +    +      +  +  D+    +       LR AGI  E+     K    Q K A+
Sbjct: 316 GRAAPERRP----AVFFVSADATGALEALRLAAGLRRAGIACELDPRGGK-LKAQFKQAE 370

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           R     A++ G  E + G  ++KDL   +E    +    +
Sbjct: 371 RVGARWAVVLGGNEVATGQAKLKDLQTREETPVALSELAA 410


>gi|167040110|ref|YP_001663095.1| histidyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914195|ref|ZP_07131511.1| histidyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724570|ref|YP_003904321.1| histidyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|229558739|sp|B0K0N4|SYH_THEPX RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166854350|gb|ABY92759.1| histidyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300889130|gb|EFK84276.1| histidyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581631|gb|ADN55030.1| histidyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 418

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 104/465 (22%), Positives = 186/465 (40%), Gaps = 50/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E      I   IR I + YGF  I TP  E+++   + + +  D 
Sbjct: 1   MLTKAPRGTKDILPSESYKWQYIEGLIREICDVYGFKEIRTPGFEHTELFLRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+L+ + T+P  R   E+       P + Y I PV+R E+   GR
Sbjct: 61  VRKEMYTFTDKGGRSITLKAEGTSPAVRAFIEHNLYAETQPTKLYYITPVYRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q  V+  G+   +ADAE+  +    L+ +G+   +  I      +     +    
Sbjct: 121 LREHHQFGVEIFGAKNASADAEVISVAMTLLKKLGLNNLELRINSVGCPVCR---KNYNK 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L + L  L   D   ++ +  +++L  +          +     ++   ++  +L
Sbjct: 178 VLKDFLKDNLEYL-CDDCKVRYEINPLRVLDCK---------VESCQRITKDAPLITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +    EL + +                               I   IVRGL+YYT 
Sbjct: 228 CDDCKSHFEELQKYLD-----------------------IMGYDYIIDPRIVRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E I         +     G+V GGGRYDGL+    G ++P  GF +G+ RL++ L+ 
Sbjct: 265 TAFEII--------SKDIGAQGTVCGGGRYDGLIEECGGPSMPGVGFGMGLERLLLTLEQ 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  I +   + +       ++          LR  G++ E      ++   Q+KYA
Sbjct: 317 NGI---EIPKPEGIDLFIAYVGEEAKLFTFALANKLRFNGLKVERD-NMDRSLKAQMKYA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           ++ N   AI+ G  E     +++K++  G E+   I   E   + 
Sbjct: 373 NKLNAKFAIVIGEEEMKENKVKLKNMRDGSEVEISIDEIEQRIKN 417


>gi|167623300|ref|YP_001673594.1| histidyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082310|sp|B0TLI5|SYH_SHEHH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|167353322|gb|ABZ75935.1| histidyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 424

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 106/500 (21%), Positives = 189/500 (37%), Gaps = 87/500 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R    +YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKLETVLRETVGSYGYSEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ M+ A   E +GI            D      
Sbjct: 117 PQKGRYRQFHQFGVEVYGIPTADIDAEVLMLSAKLWEKLGITEHVTLELNTLGDVEERAA 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALIAFLEQHKEVLDE------------DSQRRMYSNPLRVLDSKN---------ADV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   +++ +   D       L EL++                           +  
Sbjct: 216 QALLADAPVLMDYFGEDTRSHFSHLCELLEA-----------------------VGIQYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 253 INPRLVRGLDYYNRTVFEWVTSS--------LGSQGTVLAGGRYDGLVGQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EM 409
           F++G+ R+++ L++LE   +       V +       +   +     Q LR +   A  M
Sbjct: 305 FAMGLERIVLLLETLELDKDIGPS---VDVYVTAMGDNCRVEAIKIAQELRASLPTAKVM 361

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                 NF  Q+K AD+    +A++ G  E +   + +K L                   
Sbjct: 362 SHCGGGNFKKQMKRADKSGATVALVIGEDELANNQVAVKHLR-----------------E 404

Query: 470 RVAQITIPISELVSTVKKIL 489
             AQ  +    L + + +++
Sbjct: 405 DKAQELVARDALATYIAELI 424


>gi|73949341|ref|XP_535214.2| PREDICTED: similar to Histidyl-tRNA synthetase homolog
           (Histidine--tRNA ligase homolog) (HisRS) [Canis
           familiaris]
          Length = 505

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 128/496 (25%), Positives = 219/496 (44%), Gaps = 49/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+    + P+G  D   +++ +R +ILD + + ++ +G   ++TP  E  + L +   ++
Sbjct: 52  KSNFVIKTPKGTRDLSPQQMVVREKILDMVIDCFKRHGAKRLDTPAFELKEMLTEKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ L+D  G+ +SLRYDLT P ARY+A N    V   + Y++G V+R E     
Sbjct: 112 ---SGLIYDLKDQGGELLSLRYDLTVPFARYLAMNK---VKRMKRYQVGKVWRRESPTIV 165

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G++  D+ I +N+R+ILDGIL  
Sbjct: 166 QGRYREFCQCDFDIAGQFD-PMIPDAECLKIMCEVLSGLQLGDFLIKVNDRRILDGILAV 224

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             +       +   +  +IDKLDK   + V+            +      L  E  D + 
Sbjct: 225 CAVPQS----KFHAICSSIDKLDKIPWKDVR-----------HEMVAKKGLAPEVADRIG 269

Query: 242 SFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +       +G  +L ++ E +   G    +I    ++ RG
Sbjct: 270 DYVQRHGGVSLVEEMFQDSRLSQNKQALEGLGDLRLLFEYLTLFGIAE-KISFDLSLARG 328

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGIS 356
           L+YYTG +YEA+L       ++     GSV  GGRYDGLV     KG  VP  G SIG+ 
Sbjct: 329 LDYYTGVIYEAVLLQTPAQAEECL-NVGSVAAGGRYDGLVGVFDPKGHTVPCVGLSIGVE 387

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   L+    +           +       + L +       L  AGI+AE+   ++  
Sbjct: 388 RIFAILEERMKTAGLKIRTTETQVFVATPQKNFLHERLKLISELWDAGIKAELLYKNNPK 447

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y +    PL +I G  E   G+++++ +A  +E++                  I
Sbjct: 448 LLTQLHYCEHMGIPLVVIIGEQELKEGVIKLRSVASREEVA------------------I 489

Query: 477 PISELVSTVKKILQEN 492
               LV+ ++K L E+
Sbjct: 490 KRENLVAEIQKKLSES 505


>gi|89895178|ref|YP_518665.1| hypothetical protein DSY2432 [Desulfitobacterium hafniense Y51]
 gi|219669605|ref|YP_002460040.1| histidyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|123091744|sp|Q24US1|SYH_DESHY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|254782327|sp|B8FQR7|SYH_DESHD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|89334626|dbj|BAE84221.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539865|gb|ACL21604.1| histidyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 424

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 109/473 (23%), Positives = 192/473 (40%), Gaps = 58/473 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D     +     + + IR I   YG+  I TP+ E ++   + + +  D 
Sbjct: 1   MAIQRPKGTQDLLPGVVEQWQDLEEQIRKICREYGYQEIRTPIFEATELFQRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
            NK +++  D   + I+LR + TA + R   EN       P + Y IGP+FR E+   GR
Sbjct: 61  VNKEMYTFLDKGDRSITLRPEGTASVCRAYVENKLHGGPQPVKLYYIGPMFRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI----GINNRKILDGILE 180
           FRQF Q  V+ +G      DAE+  ++ D    +G+K  + H+      + R      L+
Sbjct: 121 FRQFHQFGVEVLGVDKPMVDAEVITLVWDLYSRLGLKGLEVHVNSVGCPSCRPEHKKKLQ 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      ++L          D   +F    +++L  + +     + T+GA  T +     
Sbjct: 181 EFLAPRQEQL--------CKDCQSRFEKNPLRIL--DCKNPTCQEITQGAPTTLDT---- 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L  +  +   EL  L+       K    L                       VRGL+
Sbjct: 227 ---LCEECAEHFKELQSLLSAAEVVYKVNPRL-----------------------VRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY    +E ++        +      ++ GGGRYDGLV    G   P  GF++G+ R   
Sbjct: 261 YYRKTAFEVLV--------EDIGAQSAICGGGRYDGLVQEVGGPPTPGIGFAMGMER--- 309

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L + + +    +  G   +  +     +  +       LR  G+ A + L   ++   Q
Sbjct: 310 VLAARKLAQGEQEGEGKEYLMLVALGDQAQREGFAIVSRLRKQGMPAGIDL-LGRSLKAQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           LK ADR     A I G  E  +G++ ++DL  G+++   +++ E     R  +
Sbjct: 369 LKAADRVQAHYAAILGEEELHKGIIILRDLRLGEQVELPLQDFEEVVWKRYKE 421


>gi|262274786|ref|ZP_06052597.1| histidyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221349|gb|EEY72663.1| histidyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 422

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 108/474 (22%), Positives = 191/474 (40%), Gaps = 55/474 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++  +++++   YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKVEGTVKDVISAYGYSEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIENGLLYNQEQRLWYLGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ MM A     +GI  +   + +N+   L+   
Sbjct: 117 PQKGRYRQFHQFGVEVFGLNGPDVDAELIMMTARLWRKLGIYEH-VRLELNSIGSLEARA 175

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                   D L +   +L   D   +     +++L  +                      
Sbjct: 176 N-YREALVDFLMQHEAILD-DDCKRRMHTNPLRVLDTKN---------PDIQAVLSDAPK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + ++L  D ++    L EL+           +L                       VRGL
Sbjct: 225 LSAYLDEDSKQHFAGLCELLDAAGIQYTINEKL-----------------------VRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E I               G+V GGGRYDGLV +  G+  PA GF++G+ RL+
Sbjct: 262 DYYNRTVFEWIT--------DSLGAQGTVCGGGRYDGLVEQLGGKATPAVGFAMGVERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + +++L       +    V +  +     +L       + LR    G+R     G   NF
Sbjct: 314 LLMETLAL----DETRPAVDVYMVTAGEGTLIAGMKLAEALREQVPGLRVMTHFGGG-NF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             Q K AD+    +A++ G  E +   +  KDL  G++L+            RV
Sbjct: 369 KKQFKRADKVGASVALVLGEDEVANNQVTFKDLKGGEQLTISQDEVADKLAQRV 422


>gi|15029520|ref|NP_036340.1| probable histidyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|332822164|ref|XP_517980.3| PREDICTED: probable histidyl-tRNA synthetase, mitochondrial isoform
           2 [Pan troglodytes]
 gi|1351156|sp|P49590|SYHM_HUMAN RecName: Full=Probable histidyl-tRNA synthetase, mitochondrial;
           AltName: Full=Histidine--tRNA ligase; Short=HisRS;
           AltName: Full=Histidine--tRNA ligase-like; Flags:
           Precursor
 gi|899109|gb|AAA73974.1| histidyl-tRNA synthetase homologue [Homo sapiens]
 gi|14043376|gb|AAH07680.1| Histidyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|15929049|gb|AAH14982.1| Histidyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|119582424|gb|EAW62020.1| histidyl-tRNA synthetase-like, isoform CRA_b [Homo sapiens]
 gi|123984443|gb|ABM83567.1| histidyl-tRNA synthetase-like [synthetic construct]
 gi|157928442|gb|ABW03517.1| histidyl-tRNA synthetase 2, mitochondrial (putative) [synthetic
           construct]
          Length = 506

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 125/496 (25%), Positives = 219/496 (44%), Gaps = 48/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     + P+G  D   + + +R +ILD + + ++ +G   ++TP  E  ++L +   ++
Sbjct: 52  KPNFIIKTPKGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ L+D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E     
Sbjct: 112 ---SGLMYDLKDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPTIV 165

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G++  D+ I +N+R+I+DG+   
Sbjct: 166 QGRYREFCQCDFDIAGQFD-PMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAV 224

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  +IDKLDK   + V+            +      L  E  D + 
Sbjct: 225 CGVPES----KFRAICSSIDKLDKMAWKDVR-----------HEMVVKKGLAPEVADRIG 269

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +       +G  +L ++ E +   G  +++I    ++ RG
Sbjct: 270 DYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARG 328

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGIS 356
           L+YYTG +YEA+L        ++P+  GSV  GGRYDGLV  F      VP  G SIG+ 
Sbjct: 329 LDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVE 388

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    +           +       + L +       L  +GI+AEM   ++  
Sbjct: 389 RIFYIVEQRMKTKGEKVRTTETQVFVATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPK 448

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y +    PL +I G  E   G+++I+ +A  +E++                  I
Sbjct: 449 LLTQLHYCESTGIPLVVIIGEQELKEGVIKIRSVASREEVA------------------I 490

Query: 477 PISELVSTVKKILQEN 492
                V+ ++K L E+
Sbjct: 491 KRENFVAEIQKRLSES 506


>gi|206580753|ref|YP_002237136.1| histidyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|229558688|sp|B5XNL6|SYH_KLEP3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|206569811|gb|ACI11587.1| histidyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 424

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 102/480 (21%), Positives = 184/480 (38%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI  S++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETALWQRIEGSLKQVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A     +G                   N
Sbjct: 117 PQKGRYRQFHQIGAEVFGLQGPDIDAELIMLTARWWRELGISDHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAYLEQFTDKLDE------------DSKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L  L+                            R  
Sbjct: 216 QALLNDAPALGDYLDEESKAHFAGLCALLDDA-----------------------GIRYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  P  G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWVTTS--------LGSQGTVCAGGRYDGLVEQLGGRATPGVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       K    V I  +   +D+ S      + +R A  G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFKADPVVDIYLVASGTDTQSAAMRLAEQVRDALPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +   ++  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVVGESEIADGNVVVKDLRSGEQTTVTQESVAAHLR 420


>gi|313893030|ref|ZP_07826607.1| histidine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442383|gb|EFR60798.1| histidine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 423

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 105/467 (22%), Positives = 182/467 (38%), Gaps = 60/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D   +++   + I   +R I + YGF+ I TP  E +    + + +  D 
Sbjct: 1   MAIRKPRGTQDFLPEQMINWHYIEQRMREICKVYGFNEIRTPAFEDTKLFLRGIGETTDV 60

Query: 66  PNKGVFSLQ--DDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGP 122
             K +++    DD G   +LR + TA   R   EN         + Y +GP+FR++K   
Sbjct: 61  VQKEMYTFTTGDDGGSSFTLRPENTASAVRAYLENKVYGKEGLTKWYYMGPMFRHDKPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR+RQF Q   + +GS +   D+E+  M+   L+  G+K      +       R +    
Sbjct: 121 GRYRQFHQFGAEVLGSQSPVVDSEVICMVVQLLKDFGLKDLNVEVNSVGCPTCRPVYREK 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        ++L          D  ++     +++L  + + +     + GA        
Sbjct: 181 LIAFFEPKKEQL--------CSDCQERLYKNPLRIL--DCKNETCKSLSVGA-------P 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   L  +      EL   +                          + +  ++  +VRG
Sbjct: 224 EIHEHLCGECHDHFEELKTYLTAA-----------------------NVQYTLNPRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E                  +V GGGRYDGLV    G + PA GF++G+ RL
Sbjct: 261 LDYYTKTAFEVQYT--------PLGAQSAVAGGGRYDGLVEELDGPHTPAIGFAMGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL+          E     +  +     +  +     Q L  A +  EM  G  K+  
Sbjct: 313 LLALEKQNLLPEPTVESS---VFVVALGDAAKVEAFKICQALHDAYVTVEMD-GQGKSMK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            QLKYA++ N    II G  E +RG   I+ +   ++ +  +     
Sbjct: 369 AQLKYANKINAKYVIILGDDELARGEAIIRFMDTSEQETVSLDAVSE 415


>gi|168821504|ref|ZP_02833504.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205341920|gb|EDZ28684.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320087017|emb|CBY96786.1| Histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 424

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 180/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGIADHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D  +    L +L+            L                  
Sbjct: 216 QALLNDAPALGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   + + S      + LR    G +  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGGKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 420


>gi|23099475|ref|NP_692941.1| histidyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|32130108|sp|Q8EPR9|SYH_OCEIH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|22777704|dbj|BAC13976.1| histidyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 429

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 99/474 (20%), Positives = 188/474 (39%), Gaps = 51/474 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   ++          I+ I  NY +  I TPL E+++   + + D  D 
Sbjct: 1   MSMKAPRGTVDLLPEQSIKWQFAESKIKEICHNYHYQEIRTPLFEHTEVFQRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA +AR   EN    +   P + +  G +FR E+   G
Sbjct: 61  VQKEMYTFEDRGGRSLTLRPEGTASVARAYVENKLFGSPNQPTKLFYFGSMFRYERPQKG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R RQ  Q   + +GS     DAE+     +  +++G+K     I    +++  +     +
Sbjct: 121 RMRQLNQFGTEVIGSEDPAVDAEVMDFAMNIYKSLGLKSVKLVINSLGDQESRESHRNAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +    E        D  ++     +++L  +   D+    T            +  
Sbjct: 181 IQHFEPHREEL-----CHDCQNRLDKNPLRVLDCKKDRDHPAMGT---------APKITD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+   +    ++   +                               +   +VRGL+YY
Sbjct: 227 FLNEYSKTYFADVMTYLDAL-----------------------DIEYVVDPNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E       M+E +      ++ GGGRY+GLV  F G + P  GF +G+ RLI+AL
Sbjct: 264 NHTAFEI------MSEAEGFGAITTLAGGGRYNGLVEEFGGPSSPGIGFGMGLERLIMAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++   +    +++        +   +S  +     + LR  GI+A+M     +    QLK
Sbjct: 318 EAENITLPIDQQLDC---FVANMGDESKLEATKVVKRLRDNGIQADMDY-QKRKMKGQLK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            ADR      I  G  E  +  + +K+++ G +    +       + ++    I
Sbjct: 374 AADRYQSKFVIFLGDDEIEKQEVTLKEMSTGDQSEVSMSQLVEVLQEKLNGGKI 427


>gi|251788749|ref|YP_003003470.1| histidyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537370|gb|ACT05991.1| histidyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 424

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 105/473 (22%), Positives = 187/473 (39%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI DS++ +   YG+  I TP++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPAETALWQRIEDSLKQVLRGYGYSEIRTPIVEQTSLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R +  GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGILYNQEQRLWYTGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAEM +M A     +GI ++     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLKGPDIDAEMILMTARWWRVLGIDQHVSLELNSIGSLDARAR 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D+L+E        D L +     +++L  +                 
Sbjct: 177 YREALIAFLEQHKDQLDE--------DCLRRMYTNPLRVLDSKN---------AQVQALL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +   ++  +L  D      EL EL+  +    K  + L                      
Sbjct: 220 DNAPVLTDYLDDDSRAHFDELCELLTESGIPYKVNSRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V GGGRYDG+V +  G + PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTSS--------LGSQGTVCGGGRYDGMVEQLGGSSTPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++            V    +     +        + +R A   +      G
Sbjct: 309 LERLVLLVQTVN---PAFAAQSGVDAYLISSGVGTQHAAIKLAEKVRDALPQLTLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q   AD+    +A++ G  E + G + +K+L  G++ +    +  +
Sbjct: 366 GG-NFKKQFARADKSGARVALVLGETEVATGQVVLKNLTSGEQETLSQADVAA 417


>gi|271501570|ref|YP_003334596.1| histidyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270345125|gb|ACZ77890.1| histidyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 424

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 105/473 (22%), Positives = 187/473 (39%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI DS++ +   YG+  I TPL+E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPAETALWQRIEDSLKQVLRGYGYSEIRTPLVEQTSLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R +  GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGILYNQEQRLWYTGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAEM +M A     +GI ++     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLKGPDIDAEMILMTARWWRVLGIDQHVNLELNSIGSLDARAR 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D+L+E        D L +     +++L  +                 
Sbjct: 177 YRDALIAFLEQHKDQLDE--------DCLRRMYTNPLRVLDSKN---------AQVQALL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +      EL EL+  +                           K++  
Sbjct: 220 NNAPTLTDYLDDESRTHFDELCELLTQS-----------------------GIPYKVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V GGGRYDG+V +  G + PA GF +G
Sbjct: 257 LVRGLDYYNRTVFEWVTSS--------LGSQGTVCGGGRYDGMVEQLGGSSTPAVGFGMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++            V    +   + +        + LR A   ++     G
Sbjct: 309 LERLVLLVQTVN---PAFAVQPGVDAYLISSGAGTQHAAIRLAEKLRDALPQLKLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q   AD+    +A++ G  E + G + +K+L  G++ +    +  +
Sbjct: 366 GG-NFKKQFARADKSGARVALVLGETEVAAGQVVLKNLTNGEQETLSQADVAA 417


>gi|127512223|ref|YP_001093420.1| histidyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166228614|sp|A3QCG3|SYH_SHELP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|126637518|gb|ABO23161.1| histidyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 423

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 111/496 (22%), Positives = 198/496 (39%), Gaps = 80/496 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R+    YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKLEAVLRDTVAAYGYSEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFADRNGDLLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G ++   DAE+ MM     + +GI  +     +       R  
Sbjct: 117 PQKGRYRQFNQFGVEVYGIASADIDAEVLMMSHRLWQKLGISEHVKLELNTLGDAQERAA 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L +     ++KL+E        D   +     +++L  +                 
Sbjct: 177 YRDALVEFLEQHEEKLDE--------DSQRRMYSNPLRVLDSKN---------PDVQALL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L  +       L EL++                           + +I+  
Sbjct: 220 GDAPALMDYLGEESRGHFAHLCELLEA-----------------------VGIQYEINPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G++ PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVT--------DSLGAQGTVLAGGRYDGLVGQLGGKDTPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGS 413
           + R+++ L++L  +       GPV +       D         Q LR   G++  M    
Sbjct: 309 LERIVLMLETLALTD---DVSGPVDVYVTAMGDDCRVAAIKVAQQLREVDGLKV-MSHCG 364

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             NF  Q+K AD+    LAI+ G  E + G + +K L + KE                 Q
Sbjct: 365 GGNFKKQMKRADKSGAKLAIVIGETELANGQVALKYLREEKE-----------------Q 407

Query: 474 ITIPISELVSTVKKIL 489
             +    L + V +++
Sbjct: 408 ELVAQDSLAAYVAELI 423


>gi|311250315|ref|XP_003124096.1| PREDICTED: probable histidyl-tRNA synthetase, mitochondrial-like
           [Sus scrofa]
          Length = 506

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 124/498 (24%), Positives = 219/498 (43%), Gaps = 48/498 (9%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            +K     + P+G  D   +++ +R +ILD + + ++ +G   ++TP  E  + L +   
Sbjct: 50  KEKPNFILKTPKGTRDFSPQQMVVREKILDMVVSCFKRHGAKRLDTPAFELKEMLTERYG 109

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           ++   +  ++ L+D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E   
Sbjct: 110 ED---SGLIYDLKDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPT 163

Query: 122 --PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F QCD D  G        +   +        G++  D+ I +N+R++LDGI 
Sbjct: 164 IVQGRYREFCQCDFDIAGHFD-PMIPDAECVKIMCEILSGLQLGDFLIKVNDRRLLDGIF 222

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+       +   +  ++DKLDK   + V+            +      L  E  D 
Sbjct: 223 AVCGVPES----KFHAICSSVDKLDKMSWKDVR-----------HEMVAKRGLAPEVADR 267

Query: 240 MVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +  ++      S+ E       +       +G  +L ++ + +   G    +I    ++ 
Sbjct: 268 IGDYVQCHGGVSLVEDMLQDPELSRNKQALEGLGDLKLLFDYLTLFGIAE-KISFDLSLA 326

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIG 354
           RGL+YYTG +YEA+L        ++P+  GSV  GGRYDGLV  F      VP  G SIG
Sbjct: 327 RGLDYYTGVIYEAVLLQTPAQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHTVPCVGLSIG 386

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + R+   ++    +           +       + L +       L  AGI+AE+   ++
Sbjct: 387 VERIFSIVEQRMKTFGEKIRTTETQVFVATPQKNFLRERLKLIAELWDAGIKAELMYKNN 446

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                QL Y++    PL +I G  E   G ++++ +A  +E++                 
Sbjct: 447 PKLLTQLHYSEDMGIPLVVIIGEQELKEGFIKLRSVASREEVA----------------- 489

Query: 475 TIPISELVSTVKKILQEN 492
            I    LV+ ++K L E+
Sbjct: 490 -IKRENLVAEIQKRLSES 506


>gi|288934095|ref|YP_003438154.1| histidyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288888824|gb|ADC57142.1| histidyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 424

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 102/480 (21%), Positives = 184/480 (38%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI  S++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETALWQRIEGSLKQVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A     +G                   N
Sbjct: 117 PQKGRYRQFHQIGAEVFGLQGPDIDAELIMLTARWWRELGISDHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAYLEQFTDKLDE------------DSKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L  L+                            R  
Sbjct: 216 QALLNDAPALGDYLDEESKTHFAGLCALLDDA-----------------------GIRYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  P  G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWVTTS--------LGSQGTVCAGGRYDGLVEQLGGRATPGVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       K    V I  +   +D+ S      + +R A  G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFKADPVVDIYLVASGTDTQSAAMRLAEQVRDALPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +   ++  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARIALVVGESEIADGNVVVKDLRSGEQTTVTQESVAAHLR 420


>gi|125973847|ref|YP_001037757.1| histidyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004300|ref|ZP_05429282.1| histidyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281418008|ref|ZP_06249028.1| histidyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166227964|sp|A3DF35|SYH_CLOTH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|125714072|gb|ABN52564.1| histidyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991734|gb|EEU01834.1| histidyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409410|gb|EFB39668.1| histidyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316939956|gb|ADU73990.1| histidyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 417

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 97/462 (20%), Positives = 177/462 (38%), Gaps = 52/462 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E+   + I   I  +  ++G+  I  P+ E+++   + + D  D 
Sbjct: 1   MLTQAPKGTKDILPSEVYKWHYIEKEIAKLCHDFGYKEIRIPVFEHTELFQRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + I+LR + TA + R   EN   ++  P + Y     +R E    GR
Sbjct: 61  VQKEMYTFLDKGQRSITLRPEGTAGVVRSYIENGMASLPQPVKLYYNITAYRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           +R+F Q  V+  G+   + D E+  M+    + +GIK        I          +K+ 
Sbjct: 121 YREFHQFGVEAFGAPGPSIDVEIISMVKLFFDRLGIKEISLNINSIGCPVCRAEYNKKLM 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +    L++            +F    ++++  +  +             +     +V  
Sbjct: 181 DYLRPNLSKLCATCN-----TRFERNPLRIIDCKEESCKK---------ITANAPALVEN 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +     L   ++      K    +                       VRGL+YYT
Sbjct: 227 LCDDCKNHFEGLKAGLENLGIDYKIDKNI-----------------------VRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +               G+V GGGRYDGLV    G+  P  GF++G+ RL++ ++
Sbjct: 264 KTVFEFV--------SDNIGAQGTVCGGGRYDGLVEACGGKPTPGIGFAMGLERLLMVME 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +        K+     I        + S  +     LR  G+ AE  L   K+   Q+KY
Sbjct: 316 NQGIKFPESKKPD---IFIAAIGDKANSYAEKMVYELRKEGLSAEKDL-MGKSLKAQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           AD+     +I  G  E   G   +K++  G++    +    S
Sbjct: 372 ADKLGAKYSIALGDDEIESGKAVLKNMETGEQKEISLDTLIS 413


>gi|297295257|ref|XP_002808484.1| PREDICTED: LOW QUALITY PROTEIN: probable histidyl-tRNA synthetase,
           mitochondrial-like [Macaca mulatta]
          Length = 506

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 126/496 (25%), Positives = 219/496 (44%), Gaps = 48/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     ++P+G  D   + + +R +ILD + + ++ +G   ++TP  E  ++L +   ++
Sbjct: 52  KPNFIIKIPKGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ L+D  G+ +SLRYDLT P ARY+A    + V   + Y +G V+R E     
Sbjct: 112 ---SGLMYDLKDQGGELLSLRYDLTVPFARYLAM---SKVKKMKRYHVGKVWRRESPSIV 165

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G++  D+ I +N+R+I+DG+   
Sbjct: 166 QGRYREFCQCDFDIAGQFD-PMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAA 224

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  +IDKLDK   + V+            +      L  E  D + 
Sbjct: 225 CGVPES----KFRAICSSIDKLDKMAWKDVR-----------HEMVAKKGLAPEVADRIG 269

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +       +G  +L ++ E +   G    +I    ++ RG
Sbjct: 270 DYVQCHGGVSLVEQMFQDPRLSQNKQALEGLEDLKLLFEYLNLFGIAE-KISFDLSLARG 328

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGIS 356
           L+YYTG +YEA+L        ++P+  GSV  GGRYDGLV  F      VP  G SIG+ 
Sbjct: 329 LDYYTGVIYEAVLLQTPTQXGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVE 388

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    +           +       + L +       L  AGI+AEM   ++  
Sbjct: 389 RIFYIVEQRMKTKGEKVRTTETQVFVATPQKNFLQERLKLITELWDAGIKAEMLYKNNPK 448

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y +    PL +I G  E   G+++I+ +A  +E++                  I
Sbjct: 449 LLTQLHYCESTGIPLVVIIGEQELKEGIIKIRSVASREEVA------------------I 490

Query: 477 PISELVSTVKKILQEN 492
               LV+ ++K L E+
Sbjct: 491 KRENLVAEIQKRLSES 506


>gi|163848486|ref|YP_001636530.1| histidyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526415|ref|YP_002570886.1| histidyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669775|gb|ABY36141.1| histidyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222450294|gb|ACM54560.1| histidyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 438

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 137/467 (29%), Positives = 224/467 (47%), Gaps = 36/467 (7%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +  +G  D    ++ +R  I++++  I E++GF+P++TP++EY+++L   L DE    K
Sbjct: 4   IQNVKGMRDHLPADMMLRQYIVNTLTRISESHGFEPLQTPIIEYAETLEGKLGDE---EK 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ ++LRYD T PLAR  A+    +  P R Y  GP +R E+   GR+R+F
Sbjct: 61  LIYRFEDHGGRRLALRYDQTVPLARVTAQYAGQLTLPWRRYAYGPSYRGERPARGRYREF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q D+D VGS++  ADAE+  M+ + L A+G     +   +N+R+I+ GI    GL  + 
Sbjct: 121 YQFDLDIVGSASPLADAEIVAMLCEALTALGFPG--FVTLLNHRQIIGGIARVSGLSEEA 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                    RAIDK DK G  GV+  L +              +T    D ++  + ID 
Sbjct: 179 AGGVY----RAIDKFDKIGADGVRAELIKS------------GVTPAAADQILELVQIDG 222

Query: 249 --EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             ++ +  L + +            L  + + +   G  + + +++  + RGL YYTG V
Sbjct: 223 TADEVLDALAQKLAADERAVAAIANLRAVLDGLMAMGVPAEQYRVAPRLARGLSYYTGVV 282

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EAI               GS+ GGGRYD L+  F G+N+P  G + GI RL   +  L 
Sbjct: 283 FEAITPHWPE---------GSLLGGGRYDHLIGLFAGRNIPTVGLAFGIDRLHDVMIELN 333

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       L       ++ +++       LR AGI   + L    N G Q K ADR
Sbjct: 334 LGPRP---QTTALAFVTLFGAEQVAESLRLAAELRAAGINTLIALEPG-NIGKQFKEADR 389

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           R    A++ G  E +RG + IKDL +G++ S       S     +++
Sbjct: 390 RGVRFALVLGPDELARGEVVIKDLQRGEQRSLPRAAAISLLAEALSE 436


>gi|238895969|ref|YP_002920705.1| histidyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238548287|dbj|BAH64638.1| histidyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 424

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 102/480 (21%), Positives = 184/480 (38%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI  S++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETALWQRIEGSLKQVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A     +G                   N
Sbjct: 117 PQKGRYRQFHQIGAEVFGLQGPDIDAELIMLTARWWRELGISEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAYLEQFTDKLDE------------DSKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L  L+                            R  
Sbjct: 216 QALLNDAPALGDYLDEESKAHFAGLCALLDDA-----------------------GIRYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  P  G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWVTTS--------LGSQGTVCAGGRYDGLVEQLGGRATPGVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       K    V I  +   +D+ S      + +R A  G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFKADPVVDIYLVASGTDTQSAAMRLAEQVRDALPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +   ++  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARVALVVGESEIADGNVVVKDLRSGEQTTVTQESVAAHLR 420


>gi|326390137|ref|ZP_08211698.1| histidyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993785|gb|EGD52216.1| histidyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 418

 Score =  265 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 106/465 (22%), Positives = 187/465 (40%), Gaps = 50/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E      I   IR I + YGF  I TP  E+++   + + +  D 
Sbjct: 1   MLTKAPRGTKDILPSESYKWQYIEGLIREICDVYGFKEIRTPGFEHTELFLRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+L+ + T+P  R   E+       P + Y I PV+R E+   GR
Sbjct: 61  VRKEMYTFTDKGGRSITLKAEGTSPAVRAFIEHNLYAETQPTKLYYITPVYRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q  V+  G+ + +ADAE+  +    L+ +G+   +  I      +     +    
Sbjct: 121 LREHHQFGVEIFGAKSASADAEVISVAMTLLKKLGLNNLELRINSIGCPVCR---KNYNK 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L + L  L   D   ++ +  +++L  +          +     ++   ++  +L
Sbjct: 178 VLKDFLRDNLEYL-CDDCKVRYEINPLRVLDCK---------VESCQRITKDAPLITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +    EL + +                               I   IVRGL+YYT 
Sbjct: 228 CDDCKSHFEELQKYLD-----------------------IMGYDYIIDPRIVRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E I         +     G+V GGGRYDGL+    G ++P  GF +G+ RL++ L+ 
Sbjct: 265 TAFEII--------SKDIGAQGTVCGGGRYDGLIEECGGPSMPGVGFGMGLERLLITLEQ 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  I +   V +       ++          LR  G++ E      ++   Q+KYA
Sbjct: 317 NGI---EIPKPEGVDLFIAYVGEEAKLFTFALANKLRFNGLKVERD-NMDRSLKAQMKYA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           ++ N   AI+ G  E     +++KD+  G E+   I   E   + 
Sbjct: 373 NKLNAKFAIVIGEEEMKENKVKLKDMRVGSEVEISIDEIEQRIKN 417


>gi|15598997|ref|NP_252491.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|116051827|ref|YP_789330.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254236706|ref|ZP_04930029.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|254242493|ref|ZP_04935815.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|296387683|ref|ZP_06877158.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|313109220|ref|ZP_07795188.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|32130147|sp|Q9HXJ5|SYH_PSEAE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|122260974|sp|Q02RV6|SYH_PSEAB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|9949975|gb|AAG07189.1|AE004798_12 histidyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|115587048|gb|ABJ13063.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126168637|gb|EAZ54148.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126195871|gb|EAZ59934.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|310881690|gb|EFQ40284.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 429

 Score =  265 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 104/487 (21%), Positives = 194/487 (39%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++      +  +   + + YG+  I  P+LE+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPAWRYLERTFAGLLDGYGYSEIRLPILEFTELFARGI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D  +K +++  D +G+ +++R + TA   R V E+  +      + +  GP+FR E
Sbjct: 57  GEGTDVVDKEMYTFLDRNGESLTMRPEGTAGCVRAVLEHGLSGGGQVQKLWYTGPMFRYE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI---------KRNDYHIGI 169
           K   GR+RQF Q  V+         DAE+ ++     + +G+                  
Sbjct: 117 KPQKGRYRQFHQIGVEVFNLPGPDIDAELIILTWRLWQKLGMADAVTLQLNTLGSSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L++     D+            D   +     +++L  +   +++     G
Sbjct: 177 RYREALVAYLQERFEQLDE------------DSQRRMTTNPLRILDSK--VESTQALLVG 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A    + +D                           E+       +   +   G    R 
Sbjct: 223 APTLHDYLD---------------------------EESIAHFEGLKARLDAVGL---RY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I+  +VRGL+YY    +E +          K    G+V GGGRYDGLVS+F G+  P  
Sbjct: 253 EINQKLVRGLDYYCRTAFEWVT--------DKLGAQGTVCGGGRYDGLVSQFGGKPTPGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++G+ RL++ L++L      +     + +      ++         + LR+A  GIR 
Sbjct: 305 GFAMGVERLVLLLETLGVIPAELNRPADLYVCAFGEPAEL--AALTLAEQLRSAIPGIRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESW 466
            +  G+  +F +Q K AD+     A+I G  E +  ++  K L   G++ S         
Sbjct: 363 LVNAGAG-SFKSQFKKADKSGARFALILGEDEVANRVVGFKPLRDEGEQQSIAWDALPEH 421

Query: 467 REARVAQ 473
             A +AQ
Sbjct: 422 LAACLAQ 428


>gi|189066563|dbj|BAG35813.1| unnamed protein product [Homo sapiens]
          Length = 506

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 125/496 (25%), Positives = 219/496 (44%), Gaps = 48/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     + P+G  D   + + +R +ILD + + ++ +G   ++TP  E  ++L +   ++
Sbjct: 52  KPNFIIKTPKGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ L+D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E     
Sbjct: 112 ---SGLMYDLKDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPTIV 165

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G++  D+ I +N+R+I+DG+   
Sbjct: 166 QGRYREFCQCDFDIAGQFD-PMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAV 224

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  +IDKLDK   + V+            +      L  E  D + 
Sbjct: 225 CGVPES----KFRAICSSIDKLDKMAWKDVR-----------HEMVVKKGLAPEVADRIG 269

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +       +G  +L ++ E +   G  +++I    ++ RG
Sbjct: 270 DYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARG 328

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGIS 356
           L+YYTG +YEA+L        ++P+  GSV  GGRYDGLV  F      VP  G SIG+ 
Sbjct: 329 LDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVE 388

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    +           +       + L +       L  +GI+AEM   ++  
Sbjct: 389 RIFYIVEQRMETKGEKVRTTETQVFVATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPK 448

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y +    PL +I G  E   G+++I+ +A  +E++                  I
Sbjct: 449 LLTQLHYCESTGIPLVVIIGEQELKEGVIKIRSVASREEVA------------------I 490

Query: 477 PISELVSTVKKILQEN 492
                V+ ++K L E+
Sbjct: 491 KRENFVAEIQKRLSES 506


>gi|116872949|ref|YP_849730.1| histidyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741827|emb|CAK20951.1| histidyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 425

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 102/471 (21%), Positives = 184/471 (39%), Gaps = 49/471 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + + D  + + ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLEDEFKKVCENYQYEEIRTPIFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   G
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF Q  ++ +GS   + D E+  +       +G+      I     K      E   
Sbjct: 121 RQRQFTQMGIEALGSDDPSIDVEVISLAMAFFRKIGLTNIKLVINSLGDK------ESRL 174

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            H +  +      +       +  L    L + + + D+            +    ++ F
Sbjct: 175 KHREALVAHFEPHIDEFCAECQVRLHKNPLRILDCKKDHENPLI-------KSAPSILDF 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ +       +   +                              +I  T+VRGL+YY 
Sbjct: 228 LNEESIAYFENVKNYLTALE-----------------------IPFEIDPTMVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL+
Sbjct: 265 HTTFEIMSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGIGFGIGVERILLALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             +     I    P+ +  +    ++  K       LR  GI AE      +    QLK 
Sbjct: 319 KADI---KIPAKKPLKVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKLKAQLKD 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           A+R+     II G  E   G  Q+K +  G++ +   +           + 
Sbjct: 375 ANRKKANYTIILGEEELQTGNYQLKHMESGEQEAVSEQTIIEKLTIAKEEK 425


>gi|307132059|ref|YP_003884075.1| histidyl tRNA synthetase [Dickeya dadantii 3937]
 gi|306529588|gb|ADM99518.1| histidyl tRNA synthetase [Dickeya dadantii 3937]
          Length = 424

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 104/473 (21%), Positives = 191/473 (40%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI DS++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPAETALWQRIEDSLKQVLRGYGYSEIRMPIVEQTSLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGILYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAEM +M A     +GI ++     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLKGPDVDAEMILMTARWWRVLGIDQHVSLELNSIGSLDARAR 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D+L+E        D L +     +++L  +     +           
Sbjct: 177 YREALIAFLEEHKDQLDE--------DCLRRMYTNPLRVLDSKNVQVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +   ++  +L  D      EL EL+  +                           K++  
Sbjct: 220 DNAPVLTDYLDDDSRAHFDELCELLTQS-----------------------GIPYKVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V GGGRYDG+V +  G + PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTSS--------LGSQGTVCGGGRYDGMVEQLGGSSTPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++            V    +   + +        + +R A   ++     G
Sbjct: 309 LERLVLLVQTVN---PAFAAQPGVDAYLISSGAGTQHAAIQLAEKVRDALPQLKLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q   AD+    +A++ G  E + G + +K+L  G++ +    +  +
Sbjct: 366 GG-NFKKQFARADKSGARVALVLGETEVAAGQVVVKNLTSGEQETLAQADVAA 417


>gi|269798268|ref|YP_003312168.1| histidyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094897|gb|ACZ24888.1| histidyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 423

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 181/467 (38%), Gaps = 60/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D   +++   + I   +R I + YGF+ I TP  E +    + + +  D 
Sbjct: 1   MAIRKPRGTQDFLPEQMINWHYIEQRMREICKVYGFNEIRTPAFEETKLFLRGIGETTDV 60

Query: 66  PNKGVFSLQ--DDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGP 122
             K +++    DD G   +LR + TA   R   EN         + Y +GP+FR++K   
Sbjct: 61  VQKEMYTFTTGDDGGSSFTLRPENTASAVRAYLENKVYGKEGLTKWYYMGPMFRHDKPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR+RQF Q   + +GS +   D+E+  M+   L+  G+K      +       R +    
Sbjct: 121 GRYRQFHQFGAEVLGSQSPVVDSEVICMVVQLLKDFGLKDLNVEVNSVGCPTCRPVYREK 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        ++L          D  ++     +++L  + + +     + GA    E + 
Sbjct: 181 LIAFFEPKKEQL--------CSDCQERLYKNPLRIL--DCKNETCKSLSIGAPEIHEHL- 229

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                                      E+  +    +   +      + +  ++  +VRG
Sbjct: 230 --------------------------CEECHDHFEELKTYLTA---ANVQYTLNPRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E                  +V GGGRYDGLV    G + PA GF++G+ RL
Sbjct: 261 LDYYTKTAFEVQYT--------PLGAQSAVAGGGRYDGLVEELDGPHTPAIGFAMGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL+          E        +     +  +     Q LR+  I  EM  G  K+  
Sbjct: 313 LLALEKQNLLPEPTVEPSA---FVVALGDAAKVEAFKICQKLRSLDIPVEMD-GQGKSMK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            QLKYA++ N    II G  E  R    I+ +   ++ +  +     
Sbjct: 369 AQLKYANKINAKYVIILGDDELVRKEAIIRFMDTSEQETVSLDTVAE 415


>gi|307265229|ref|ZP_07546788.1| histidyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919851|gb|EFN50066.1| histidyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 418

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 106/465 (22%), Positives = 186/465 (40%), Gaps = 50/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E      I   IR I + YGF  I TP  E+++   + + +  D 
Sbjct: 1   MLTKAPRGTKDILPSESYKWQYIEGLIREICDVYGFKEIRTPGFEHTELFLRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+L+ + T+P  R   E+       P + Y I PV+R E+   GR
Sbjct: 61  VRKEMYTFTDKGGRSITLKAEGTSPAVRAFIEHNLYAETQPTKLYYITPVYRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q  V+  G+ + +ADAE+  +    L+ +G+   +  I            +    
Sbjct: 121 LREHHQFGVEIFGAKSASADAEVISVAMTLLKKLGLNNLELRINSIGCPACR---KNYNK 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L + L  L   D   ++ +  +++L  +          +     ++   ++  +L
Sbjct: 178 VLKDFLKDNLEYL-CDDCKVRYEINPLRVLDCK---------VESCQRITKDAPLITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +    EL + +                               I   IVRGL+YYT 
Sbjct: 228 CDDCKSHFEELQKYLD-----------------------IMGYDYIIDPRIVRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E I         +     G+V GGGRYDGL+    G ++P  GF +G+ RL++ L+ 
Sbjct: 265 TAFEII--------SKDIGAQGTVCGGGRYDGLIEECGGPSMPGVGFGMGLERLLITLEQ 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  I +   V +       ++          LR  G++ E      ++   Q+KYA
Sbjct: 317 NGI---EIPKPEGVDLFIAYVGEEAKLFTFALANKLRFNGLKVERD-NMDRSLKAQMKYA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           ++ N   AI+ G  E     +++KD+  G E+   I   E   + 
Sbjct: 373 NKLNAKFAIVIGEEEMKENKVKLKDMRVGSEVEISIDEIEQRIKN 417


>gi|255034936|ref|YP_003085557.1| histidyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254947692|gb|ACT92392.1| histidyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 453

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 149/480 (31%), Positives = 229/480 (47%), Gaps = 51/480 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  L RG  D   +++  R  I D+IR  ++ YGF P+ETP  E    L GK+  + D  
Sbjct: 3   KPSLARGTRDFGPEQMAKRTFIFDTIRRSFQRYGFLPLETPAFENLSVLMGKYGEEGDQL 62

Query: 65  ---RPNKGVF--SLQD----DDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCRT 108
                N G +   L D       + ++       LRYDLT P ARYV  N  T+  P + 
Sbjct: 63  LFKILNSGDYAGKLTDADWQAGSKPLTTKISEKGLRYDLTVPFARYVVMNRGTLAMPFKR 122

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y+I PV+R ++   GR+R+F QCD D VG+ +   +AE+  ++ D L A+G   ND+ + 
Sbjct: 123 YQIQPVWRADRPQKGRYREFYQCDADVVGTDSLLCEAEIVGLLHDILPALG--INDFTVK 180

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           INNRKIL GI + IG HG +       +  AIDKLDK G   V   L E           
Sbjct: 181 INNRKILTGIADIIGAHGME-----GPLCVAIDKLDKIGKDKVVEELLER---------- 225

Query: 229 GANLTSEQIDIMVSFLSIDLEKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                S+ ID +    S+  ++    EL   +  +    KG  EL  +  +V+  G  + 
Sbjct: 226 --GFASDSIDKLEPIFSLSADEDPFTELKSWLSESEVALKGIQELEEVWAMVKILGLENA 283

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
           +I+   T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F    + 
Sbjct: 284 KIEFDVTLARGLSYYTGAIFEV---------KAHHVQIGSISGGGRYDNLTGTFGVPGIS 334

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             G S+G+ R+   ++ L    ++      V+I+    D ++ +         R AGI +
Sbjct: 335 GVGISLGVDRIYDVMEELNLFPDSQTTSTKVMISNF--DEEAFTYGLSILPKFRKAGINS 392

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E++  S K    QL YADR+  P  I+ G+ E   G+L +K++  G++   + ++  +  
Sbjct: 393 EIYPDSVK-LKKQLDYADRKRIPFVILIGSDEIQSGLLTLKNMKTGEQQKLKAEDIITLL 451


>gi|160876253|ref|YP_001555569.1| histidyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189082309|sp|A9KXK7|SYH_SHEB9 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|160861775|gb|ABX50309.1| histidyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315268442|gb|ADT95295.1| histidyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 426

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 111/500 (22%), Positives = 199/500 (39%), Gaps = 89/500 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R+    YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKMEAVLRSSVSAYGYSEIRTPIVENTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D++G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFADNNGDSLTLRPEGTASTVRAGNENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ M+ A   E +GI            D      
Sbjct: 117 PQKGRYRQFNQFGVEVYGIGTADIDAEVLMLSARLWEKLGISDHVSLELNTLGDPAERAV 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  + +   +       
Sbjct: 177 YRDALIAFLEQHKDALDE------------DSKRRMYSNPLRVLDSKDQNVQA------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    ++ FL  + +    +L EL+                            +  
Sbjct: 218 --ILAGAPELMDFLGEESKTHFSQLRELLDA-----------------------VGIKYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V  GGRYDGLV++  G++ PA G
Sbjct: 253 INPRLVRGLDYYNRTVFEWVTSS--------LGSQGTVLAGGRYDGLVAQLGGKDTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ R+++ L++LE + +   E   V +         L +     Q LR+A   ++  
Sbjct: 305 FAMGLERIVLLLETLELNKDIPSE---VDVYVTAMGDSCLVEAIKIAQELRSALPNLKV- 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      N   Q+K AD+    +A++ G  E + GM+ +K L                  
Sbjct: 361 MSHCGGGNVKKQMKRADKSGASVALLIGEDELAEGMVTVKHLR----------------- 403

Query: 469 ARVAQITIPISELVSTVKKI 488
             + Q  +  S L + + ++
Sbjct: 404 NDIEQQRVARSALGAFLAEL 423


>gi|207445692|ref|NP_001014034.2| histidyl-tRNA synthetase 2-like [Rattus norvegicus]
          Length = 507

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 126/496 (25%), Positives = 231/496 (46%), Gaps = 48/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     ++P+G  D   +++ +R +ILD I + ++ +G   ++TP  E  + L +   D 
Sbjct: 53  KPNFIIKVPKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDN 112

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
                 ++ L+D  G+ +SLRYDLT P ARY+A N    +      ++G V+R E     
Sbjct: 113 FGL---MYDLEDQGGELLSLRYDLTVPFARYLAMNKLKRMKRY---QVGKVWRRESPAIV 166

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G          C+ +   + + G++  D+ I +N+R+++DG+   
Sbjct: 167 QGRYREFCQCDFDIAGEFDPMIPDAECLRIMCEILS-GLQLGDFLIKVNDRRVVDGMFAV 225

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  ++DKLDK   + V+L           +   G  L  E  D + 
Sbjct: 226 CGVPES----KFRTICSSMDKLDKMSWEDVRL-----------EMVAGKGLAPEVADRIG 270

Query: 242 SFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +  +    +G  +L ++ E +R  G  +++I +  ++ RG
Sbjct: 271 DYVQCHGGISLVEELFKDPRLSQSQLALQGLGDLKLLFEYLRLFGI-ADKISLDLSLARG 329

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGIS 356
           L+YYTG +YEA+L        ++ +  GSV  GGRYD LV++F     +VP  G SIG+ 
Sbjct: 330 LDYYTGVIYEAVLLESPAQAGKETLNVGSVAAGGRYDRLVAQFDPKGHSVPCVGLSIGVE 389

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++     +          +       + L +       L  AGI+AEM   ++  
Sbjct: 390 RIFYLVEQKMKISCEKVRTTETQVFVATPQKNFLQERLKIIAQLWDAGIKAEMLYKNNPK 449

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y ++ + PL +I G  E++ G+++++ +A  +E+                  T+
Sbjct: 450 LLTQLHYCEKEDIPLMVIIGEQEQNEGVVKLRSVASREEV------------------TV 491

Query: 477 PISELVSTVKKILQEN 492
               LV+ ++K L E+
Sbjct: 492 NRESLVAEIQKRLSES 507


>gi|134298623|ref|YP_001112119.1| histidyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044261|sp|A4J2J1|SYH_DESRM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|134051323|gb|ABO49294.1| histidyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 419

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 101/470 (21%), Positives = 188/470 (40%), Gaps = 58/470 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D    E+     +    R +   YG+  I TP+ E+++   + + +  D 
Sbjct: 1   MLTTRPRGTNDILPGEVEKWQFLEQLTRQVCREYGYGEIRTPIFEHTELFARGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + I+LR + TA   R   EN    +  P + Y  GP+FR ++   GR
Sbjct: 61  VEKEMYTFTDRGDRSITLRPEGTASTVRAYVENKLHALPQPVKLYYTGPMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI----GINNRKILDGILE 180
           +RQF Q  V+  GS+    DAE+  M  D    +G++    HI        R +L   L+
Sbjct: 121 YRQFHQFGVEVFGSNDPAIDAEVIAMAMDIYHRIGLQNLKLHINSVGCPECRPVLRQRLQ 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +        L          +   ++    +++L  + +++   +  + A  T + +   
Sbjct: 181 EYFKPHLSNL--------CSNCQGRYERNPLRIL--DCKSEKCQEIGQSAPTTLDVL--- 227

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                                     +  +    +   +   G       I + +VRGL+
Sbjct: 228 ------------------------CPECNSHFESVKTYLDAVG---VSYIIDNRLVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E +                S+GGGGRY+GL+    G   P  GF++G+ R+++
Sbjct: 261 YYTRTAFEIMTQD--------IGAQSSIGGGGRYNGLIEECGGPATPGIGFALGLERILL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
             +    +   I     V I T+    +   +     Q LR  GI AE      ++   Q
Sbjct: 313 TAERQGIT-FPITRGPQVYIATVGSGIER--QAFALLQDLRRQGIAAEKDY-LGRSLKAQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           +K+A + +    +I G  E  RG+  ++D+  G++    ++    + +AR
Sbjct: 369 MKFAGKLDTRFVVILGEEEFDRGVAVVRDMQAGEQQEVSLRELVLFIKAR 418


>gi|24374822|ref|NP_718865.1| histidyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|32130107|sp|Q8EC33|SYH_SHEON RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|24349508|gb|AAN56309.1|AE015769_5 histidyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 425

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 106/478 (22%), Positives = 196/478 (41%), Gaps = 65/478 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R+    YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKVEAVLRSSVAAYGYSEIRTPIVENTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G  +   DAE+ M+ A   E +GI  +     +       R  
Sbjct: 117 PQKGRYRQFHQFGVEIYGIGSADIDAEVLMLSARLWEKLGITEHVTLELNTLGDPAERAA 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +     S           
Sbjct: 177 YREALIAFLEQHKDKLDE--------DSQRRMYSNPLRVLDSKDPQVQS---------IL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L  +  +   +L EL+                            + +++S 
Sbjct: 220 ADAPALMDYLGEESSQHFAQLRELLDA-----------------------VGIQYRVNSR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV++  G+  PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTNS--------LGSQGTVLAGGRYDGLVAQLGGKETPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R+++ L++L  + +   E   V +       + L +     Q LR+A   +R  M   
Sbjct: 309 LERIVLLLETLALTQDIPAE---VDVYVAAMGDNCLVEAIKVAQELRSALPTLRV-MSHC 364

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREA 469
              N   Q+K AD+    +A++ G  E + G++ +K L    ++         ++   
Sbjct: 365 GGGNLKKQMKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQQRVARNALSAFLAE 422


>gi|158320739|ref|YP_001513246.1| histidyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|166980043|sp|A8MGM7|SYH_ALKOO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|158140938|gb|ABW19250.1| histidyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 421

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 107/460 (23%), Positives = 190/460 (41%), Gaps = 52/460 (11%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           PRG  D    E    + +    + + + +GF+ I TP+ E+++   + + D  D   K +
Sbjct: 6   PRGTKDVLPSEAYKWHYVEGVFKEVAKRFGFEEIRTPVFEHTELFERGVGDTTDVVEKEM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D  G+ I+L+ + TAP AR   E+       P + + I PVFR E+   GRFR+  
Sbjct: 66  YTFLDRGGRSITLKPEGTAPAARSFIEHKLYADTQPTKMFYITPVFRYERPQAGRFREHH 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLHGDD 188
           Q  V+  G+S+ + DAE+  +     EA G+K+ +  I      K      + +      
Sbjct: 126 QFGVEAFGASSASVDAEVINLAMSVYEAFGVKKLELRINSVGCPKCRAEYNKVLRAFLSS 185

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L++            +   +   + + + ++D+         L       M+  L  + 
Sbjct: 186 RLDQLCGTC-------QNRFERNPIRIIDCKSDSCQAQLTDVPL-------MMDHLCGEC 231

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +    EL + ++ +                            I   IVRGL+YYT   +E
Sbjct: 232 QDHFEELKKYLEASGL-----------------------HYVIDPRIVRGLDYYTKTAFE 268

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            I               G+V GGGRYD LV    G + P  GF +GI R I+AL+     
Sbjct: 269 IITEEA--------GKKGTVCGGGRYDKLVEDCGGPSTPGVGFGMGIERAILALEDQGI- 319

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              I +   + +  +     +  +       LR AG   +      ++   Q KYA++ N
Sbjct: 320 --EIPKPEGLDVFIVTMGEKASYEGFKLLTALRRAGFSGDKDH-LDRSVKAQFKYANKVN 376

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
               II G  E  +G+ ++K++A  +E+  E+K+    +E
Sbjct: 377 ASYTIIIGENELEKGIAKLKNMANSEEIEIELKDITKLKE 416


>gi|118097162|ref|XP_001231932.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 514

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 122/487 (25%), Positives = 213/487 (43%), Gaps = 44/487 (9%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P+G  D    ++ +R R+  ++   ++ +G   I+TP+LE  ++L +   D    +K
Sbjct: 51  LKTPKGTRDHHPAQMALRERLFGTVVACFKRHGAAAIDTPVLELRETLMEKYGDN---SK 107

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++ LQD  G+ ++LRYDLT P ARY+A N  T +             N     GR+R+F
Sbjct: 108 LIYELQDQGGELLALRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPAMTRGRYREF 166

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            QCD D  G          C+ +   + +  ++  D+ I +N+R+IL+G+    G+    
Sbjct: 167 YQCDFDIAGQFDPMIPDAECLKIVHEILS-ELQIGDFLIKVNDRRILNGMFAICGIPES- 224

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              + + +   +DKLDK   + V+            +      L+ E  D +  ++ +  
Sbjct: 225 ---KLVTMCSTLDKLDKMPWEEVR-----------NEMVGEKGLSPEAADRIGEYVQLHG 270

Query: 249 EKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              + E       +      ++G  ++ ++ E +   G    +I    ++ RGL+YYTG 
Sbjct: 271 GMDLIEQLLQDPKLSQNKLAKEGLGDMKLLFEYLTLFGIT-GKISFDLSLARGLDYYTGV 329

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVALK 363
           + EA+L     +  ++ V  GSV GGGRYDGLV+ F    + VP  G SIGI R+   L+
Sbjct: 330 IIEAVLLQQENDHGEESVSVGSVAGGGRYDGLVATFDPKGRKVPCVGISIGIERIFSILE 389

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
               ++          +         LS        L  AGI+AEM          QL+Y
Sbjct: 390 QRMKASGEKVRTTETQVMVATPQKHLLSARLKLISELWDAGIKAEMMYRKDPKLLKQLQY 449

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            +    PL  I    E   G+++++D A  +E+                   IP  EL +
Sbjct: 450 CEDMGIPLVAIIKKQELRDGVVKLRDAATREEVD------------------IPREELAA 491

Query: 484 TVKKILQ 490
            +++ L+
Sbjct: 492 EIRRRLE 498


>gi|218889914|ref|YP_002438778.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|226737077|sp|B7UWI9|SYH_PSEA8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|218770137|emb|CAW25899.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 429

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 103/487 (21%), Positives = 193/487 (39%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++      +  +   + + YG+  I  P+LE+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPAWRYLERTFAGLLDGYGYSEIRLPILEFTELFARGI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D  +K +++  D +G+ +++R + TA   R V E+  +      + +  GP+FR E
Sbjct: 57  GEGTDVVDKEMYTFLDRNGESLTMRPEGTAGCVRAVLEHGLSGGGQVQKLWYTGPMFRYE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI---------KRNDYHIGI 169
           K   GR+RQF Q  V+         DAE+ ++     + +G+                  
Sbjct: 117 KPQKGRYRQFHQIGVEVFNLPGPDIDAELIILTWRLWQKLGMADAVTLQLNTLGSSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L++     D+            D   +     +++L  +   +++     G
Sbjct: 177 RYREALVAYLQERFEQLDE------------DSQRRMTTNPLRILDSK--VESTQALLVG 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A    + +D                           E+       +   +   G    R 
Sbjct: 223 APTLHDYLD---------------------------EESIAHFEGLKARLDAVGL---RY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I+  +VRGL+YY    +E +          K    G+V GGGRYDGLVS+F G+  P  
Sbjct: 253 EINQKLVRGLDYYCRTAFEWVT--------DKLGAQGTVCGGGRYDGLVSQFGGKPTPGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++G+ RL++ L++L      +     + +      ++         + LR+A  GIR 
Sbjct: 305 GFAMGVERLVLLLETLGVIPAELNRPADLYVCAFGEPAEL--AALTLAEQLRSAIPGIRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESW 466
            +  G+  +F +Q K AD+     A+I G  E +  ++  K L   G++ S         
Sbjct: 363 LVNAGAG-SFKSQFKKADKSGARFALILGEDEVANRVVGFKPLRDEGEQQSIAWDALPEH 421

Query: 467 REARVAQ 473
             A + Q
Sbjct: 422 LAACLEQ 428


>gi|49899736|gb|AAH76748.1| LOC445827 protein [Xenopus laevis]
          Length = 514

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 122/480 (25%), Positives = 212/480 (44%), Gaps = 32/480 (6%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   K++ IR ++ ++I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 54  KHKFVLKTPKGTRDYNPKQMAIREKVFNTIIKCFKRHGAETIDTPVFELKETLTGKYGED 113

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 114 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPAMTRG 169

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G          C+ +   + +  +   ++ I +N+R+ILDG+    G
Sbjct: 170 RYREFYQCDFDIAGQFDPMIPDAECLKIVHEILS-ELDLGEFLIKVNDRRILDGMFAVCG 228

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + VK            +      L  E  D +  +
Sbjct: 229 VPDS----KFRTICSSVDKLDKSPWEEVK-----------NEMVGEKGLAPEAADQIGGY 273

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  +    + E       +       +G N++  + E +   G   +++    ++ RGL+
Sbjct: 274 VQRNGGLDLIEQLIKDPKLSQNKLAIEGLNDMKTLFEFLELFGVT-DKVSFDLSLARGLD 332

Query: 301 YYTGCVYEAIL------GFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFS 352
           YYTG +YEA+L           +  ++ V  GSV GGGRYDGL  +   KG+ VP  G S
Sbjct: 333 YYTGVIYEAVLVQNQGVAQQQNDHVEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVS 392

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IGI R+   ++    ++          +         L +       L  AGI+AEM   
Sbjct: 393 IGIERIFSIMEQKAEASEEKIRTTETQVLVAAAQKKLLEERMKLISELWNAGIKAEMLYK 452

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +    NQL+Y +    PL  I G  E   G+++++ +A  +E+    +N       R  
Sbjct: 453 KNPKLLNQLQYCEESGIPLVAIIGEQELKDGVVKLRVVATREEVDVARQNLVEEIHKRTK 512


>gi|289434800|ref|YP_003464672.1| hypothetical protein lse_1435 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171044|emb|CBH27586.1| hisS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 427

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 104/464 (22%), Positives = 191/464 (41%), Gaps = 59/464 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +LPRG  D   +E+   + +  +   + ENY ++ I TP+ E+++   + + D  D  +K
Sbjct: 2   QLPRGTRDILPEEVTKWHFLEAAFAAVCENYQYEEIRTPIFEHTELFERGVGDSTDIVSK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRFR 126
            +++ QD  G+ ++LR + TA + R   E+        P + Y   P+FR E+   GR R
Sbjct: 62  EMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGAVSQPIKMYYNEPMFRYERPQGGRQR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-----NNRKILDGILEK 181
           QF Q  ++ +GS     D E+  +  +  + +G++     I       +  K  + ++  
Sbjct: 122 QFTQMGIEAIGSDDPAIDVEVISLAMEFFKRIGLRNIKLVINSLGDKESRLKHREALVSH 181

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
              H D+   E  + L             +++L  +   D         N   +    ++
Sbjct: 182 FEPHIDEFCAECQVRLH---------KNPLRILDCKKDHD---------NPLIQTAPSIL 223

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L+ +     +++   +                              +I  T+VRGL+Y
Sbjct: 224 DYLNEESVAYFNQVQTYLNALE-----------------------ISFEIDPTMVRGLDY 260

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++A
Sbjct: 261 YNHTTFEIMSEEEGFGAK------TTLCGGGRYHGLVKEFGGPDTPGIGFGIGVERILLA 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+  +     I    P+ +  +    ++  K       LR  GI AE      +    QL
Sbjct: 315 LEKADV---KIPAKKPLEVYVITAQPEAELKAVTLVNELRKNGISAEKDY-LKRKLKAQL 370

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           K A+R+N    II G  E   G  Q+K++  G++ +      E+
Sbjct: 371 KDANRKNAVYTIILGEEELQTGNYQLKNMETGEQETVFEDTLET 414


>gi|86608180|ref|YP_476942.1| histidyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556722|gb|ABD01679.1| histidyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 432

 Score =  264 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 104/472 (22%), Positives = 186/472 (39%), Gaps = 59/472 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D   +E+R+  ++  S R I     +  I TP+LE ++   + +    D   
Sbjct: 4   IQAVRGTRDILPQEVRLWQQVEASAREILGRANYQEIRTPILELTELFARSIGSATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGRFR 126
           K ++S      Q +SLR + TA + R   ++         R +  GP+FR E+   GR R
Sbjct: 64  KEMYSFSTRGEQEVSLRPENTAGVVRAYIQHGLQTAGDVQRLWYCGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEKI 182
           QF Q  V+ +GS    ADAE+  +  + L+AVG +     +       +R+     L   
Sbjct: 124 QFHQLGVELLGSRDPRADAEVIALAWELLQAVGAENLSLRLNSLGDLQDRRAYRQALVDY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                +KL+         D  ++     +++L  +                +E    +  
Sbjct: 184 LTPLREKLD--------PDSQERLTRNPLRILDSKDPRTRE---------IAEGAPKLPD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +      ++   ++                             ++   +VRGL+YY
Sbjct: 227 YLGPESRAFFEQVQAHLQ-----------------------MLDIPYQLDPYLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E +                +V GGGRYDGLV    G + PA G+++G+ RL++ L
Sbjct: 264 TDTAFEIVSPD--------LGSQSTVCGGGRYDGLVEELGGPSTPAVGWAVGMERLVLLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +           V +  +   + + ++     Q LR AG   E+ L S   FG Q K
Sbjct: 316 QKKQGEAPPAP----VEVYVISRGAKAEAQSLRIAQALRRAGFCTELDL-SGSAFGKQFK 370

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A R     A++ G  E + G +Q+K L  G++ +    +   +  +   Q 
Sbjct: 371 RASRSGATWAVVLGDAEAAAGEVQLKHLPTGQQQTLLQADLVKYLASHSGQQ 422


>gi|300312256|ref|YP_003776348.1| histidyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300075041|gb|ADJ64440.1| histidyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 451

 Score =  264 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 104/499 (20%), Positives = 197/499 (39%), Gaps = 73/499 (14%)

Query: 1   MGKKTKL-RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M ++ K+ +    +G  D    +  +     ++++++ ++YGF  I TP++E +    + 
Sbjct: 1   MSEQKKVEKIVGVKGMNDILPADAPLWELFENTVQSVLKSYGFQQIRTPIVEPTALFARG 60

Query: 60  LPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           L +  D   K ++S  D  +G  ++LR + TA + R   E+  T   P R + +GP+FR+
Sbjct: 61  LGEVTDIVEKEMYSFTDSMNGDNLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRH 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRK 173
           E+   GR+RQF Q   + VG S    DAE+ MM     + +G+       +       R 
Sbjct: 121 ERPQRGRYRQFHQVGAEAVGFSGPDIDAELIMMCQRLWDDLGLSDIRLELNSIGNAEERN 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L        D        L   D   +     +++L  +                
Sbjct: 181 KHRADLIAYFEQHKD--------LLDTDAQRRLHANPLRILDTKNPAMQEM--------- 223

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 ++ +L  +       + ++++                       +N+    I+ 
Sbjct: 224 VNAAPKLLDYLGEESRAHFEGVQKILR-----------------------HNNIPFTINP 260

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRG++YY   V+E +          +    G+V GGGRYD L+  F G+  PA GF++
Sbjct: 261 RLVRGMDYYNRTVFEWVT--------DQLGSQGTVCGGGRYDPLIEMFGGKPTPACGFAM 312

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-- 411
           G+ RL+  +K+               +  +    D+  +  +  + LRTAG+   +    
Sbjct: 313 GVERLLELMKASG----EQYAPNQCDVYLVHQGEDAQLQSFVLAERLRTAGLDVVLHCAS 368

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                +F  Q+K AD      A+I G  E   G   +K + +G           +  E R
Sbjct: 369 SNGGGSFKAQMKRADASGAAFAVIIGEDELKGGTATVKHMREG-----------NAEEGR 417

Query: 471 VAQITIPISELVSTVKKIL 489
             Q ++P   +V  + + +
Sbjct: 418 ANQNSLPFDGVVDYIVEQI 436


>gi|303238651|ref|ZP_07325184.1| histidyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593770|gb|EFL63485.1| histidyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 417

 Score =  264 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 100/462 (21%), Positives = 179/462 (38%), Gaps = 52/462 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E+     +   I  +  N+G+  I  P+ E+++   + + D  D 
Sbjct: 1   MLIKAPKGTKDILPSEVYKWQYVEKKISELCSNFGYKEIRLPVFEHTELFQRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TA + R   EN   ++  P + Y     +R E    GR
Sbjct: 61  VQKEMYTFMDKGGRSITLRPEGTAGVVRSYIENGMASLAMPIKLYYNITAYRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           +R+F Q  V+  GS+    D E+  M++   E +GIK  +     I   K      +K+ 
Sbjct: 121 YREFHQFGVECFGSNGPLVDVEIISMLSMFFERLGIKDVELNINSIGCPKCRGEYNKKLL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                 L++            ++    ++++  +  T             ++    +V  
Sbjct: 181 EFFKPNLDKLCGTC-----KTRYERNPLRIIDCKEETCKIY---------TKDAPALVDN 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D  K    L E ++                           +  I   IVRGL+YYT
Sbjct: 227 LCEDCSKHFEGLKEGLENL-----------------------GIKYNIDKNIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +         +     G+V GGGRYDGL+    G   P  GF+IGI RL++ ++
Sbjct: 264 KTVFEFV--------SKNIGAQGTVCGGGRYDGLIEECGGNQTPGIGFAIGIERLLLVME 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           S       I +   + +        +    Q     +R  G  AE  L   ++   Q+KY
Sbjct: 316 SQGI---EIPKAEAIDVYIACIGEQAQKYAQKLVYKIRQEGFSAETDL-MGRSVKAQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           AD+     +++ G  E       +K++  G+     +     
Sbjct: 372 ADKLGAVYSLVLGDTEVESNKAVLKNMLTGETKDISLDTLIE 413


>gi|32470802|ref|NP_863795.1| histidyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|39932076|sp|Q7UZ20|SYH_RHOBA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|32442947|emb|CAD71466.1| histidyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 442

 Score =  264 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 147/469 (31%), Positives = 230/469 (49%), Gaps = 34/469 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++    +GF D     +  R +++ + R ++ ++GF PI+TP LE+ + L       D  
Sbjct: 2   IQPRTLKGFRDYLPAAMIPREQLMQTAREVFRSFGFAPIDTPTLEHLEILT--GKGSDET 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ ++S +D+ G+ + +R+DLT PLAR+ A++  T+  P + Y I PV+R EK   GR+R
Sbjct: 60  DRQLYSFEDNGGRPVGMRFDLTVPLARFAAQHIGTLGTPFKRYHIAPVWRGEKPQEGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+QCD D +G+++E AD E   ++   L A+G   + + I INNR IL G+LE +GL  
Sbjct: 120 EFVQCDFDTIGTTSELADIEAVCVIDALLRAIG--IDAFTISINNRAILTGLLESLGLAD 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                    VLR++DKL K G +             + +  + A +T+EQ D ++     
Sbjct: 178 K-----TTPVLRSLDKLGKIGREK-----------TANEMVESAGVTAEQADAVLRLAEC 221

Query: 247 DLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           D +    +  L E+  G      G   L  I      SG + +R+KI  +I RGL+YYTG
Sbjct: 222 DGDAESILASLPEITGGNETAAAGIERLTQIYRGALASGVSPDRLKIDVSIARGLDYYTG 281

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++E  L         +    GSV  GGRYD L   +  Q++P  G S+G+ RL+ AL+S
Sbjct: 282 VIFETTL--------DELPGIGSVCSGGRYDNLAGLYTKQHLPGIGASLGLDRLLAALES 333

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L   +   K      +     D      Y      LR AGI  E++    K  G QLKYA
Sbjct: 334 LGRLSGVSKPCA---VFVPFFDKGHRDDYLKLASQLRDAGIGVEVYP-EPKKLGQQLKYA 389

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           D +   +AII G  E   G +Q+K LA  +       +          Q
Sbjct: 390 DSQGFAVAIIAGGNEWEAGAVQVKTLATKESQDVAYSHESPDALIEAIQ 438


>gi|262402855|ref|ZP_06079416.1| histidyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351637|gb|EEZ00770.1| histidyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 422

 Score =  264 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 105/479 (21%), Positives = 186/479 (38%), Gaps = 73/479 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++   ++N+   YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPAQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAEHVRLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRSALIEYLEQYQNVLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+                               
Sbjct: 216 QAILGDAPQLSDYLDAESKQHFAGLCELLDAA-----------------------GIEYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWIT--------ESLGSQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++L ++         V +  +     ++       + LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLGNTEVRRS----VDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
              G   NF  Q K AD+    +A++ G  E +   + +KDLA G++ +          
Sbjct: 361 THFGGG-NFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGEQSTVAQAEVAQLL 418


>gi|242240154|ref|YP_002988335.1| histidyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242132211|gb|ACS86513.1| histidyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 424

 Score =  264 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 102/477 (21%), Positives = 184/477 (38%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  +  RI DS++ +  NYG+  I TPL+E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTALWQRIEDSLKQVLRNYGYSEIRTPLVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D + + ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNDESLTLRPEGTAGCVRAGIEHGILYNQEQRLWYLGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ ++ A     +G                    
Sbjct: 117 PQKGRYRQFHQMGCEVFGLKGPDIDAELILLTARWWRVLGIDQHVSLELNSIGSLEARAR 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D L +     +++L  +             
Sbjct: 177 YRDALIAFLEQHKEQLDE------------DCLRRMYTNPLRVLDSKN---------PQV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +   +MV +L  +  +  + L EL+  +                            
Sbjct: 216 QALLDGAPVMVDYLDEESREHFNGLCELLTQS-----------------------GITYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V GGGRYDG+V +  G   PA G
Sbjct: 253 INPRLVRGLDYYNRTVFEWVTSS--------LGSQGTVCGGGRYDGMVEQLGGAATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAE 408
           F++G+ RL++ ++++            V    +   + +        + LR A   ++  
Sbjct: 305 FAMGMERLVLLVQTIN---PAFTVQSGVDAYLISSGAGTQQAAIRLAEELRDALPWLKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              G   NF  Q   AD+    +A++ G  E + G + +K+L  G++ +    +  +
Sbjct: 362 TNYGGG-NFKKQFARADKSGARVALVLGENEVAAGQVVVKNLTSGEQEALAQSDVVA 417


>gi|227824346|ref|ZP_03989178.1| histidyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904845|gb|EEH90763.1| histidyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 420

 Score =  264 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 113/487 (23%), Positives = 195/487 (40%), Gaps = 76/487 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D     +     +   +R++   + +  I TP+ E+++   + + D  D 
Sbjct: 1   MLTTAPRGTKDILPGAVNGWRYVESVLRDVCREFNYQEIRTPIFEHTELFQRGIGDGTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
            +K +++  D  G+ I+LR + TA + R   EN       P + + IGP+FR ++   GR
Sbjct: 61  VDKEMYTFNDRSGRSITLRPENTAAVVRSFVENKLYAEPMPLKVFYIGPMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQF Q  V+ +GS +   DAE  ++    L+ +G+K    + +       R     +L+
Sbjct: 121 MRQFHQFGVEAMGSPSPVVDAETILLAITVLKRLGLKDLKLKINSVGCPKCRPQHRTLLQ 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                   +L          D   +F    +++L  + + D+   F  GA         +
Sbjct: 181 DYFRPHLKEL--------CEDCQSRFDRSPLRIL--DCKVDHDKPFMAGA-------PKI 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L  +       + +L+       +  + L                       VRGL+
Sbjct: 224 TDSLCEECHDHFEMVKKLLDEAGVDYEVDSTL-----------------------VRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   YE                  +VGGGGRYDGLV    G + P  GF++G+ R+I+
Sbjct: 261 YYTKTAYEVQYS--------PLGAQSAVGGGGRYDGLVEELGGPSTPGVGFAMGLERIIL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+      +  +    + +  +  D    +        LR AG   +M     ++   Q
Sbjct: 313 ALEKQGLLKSEKEA---IDVFAVVPDEGGTADAFKAVMTLREAGYSCDMN-QIGRSMKAQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           +K ADR     A+I G  ERSRG + ++++A                    +Q  I  SE
Sbjct: 369 MKQADRAGARFALIFGEEERSRGAVTVRNMAD------------------SSQEEIKRSE 410

Query: 481 LVSTVKK 487
           +VS +KK
Sbjct: 411 IVSYMKK 417


>gi|302916751|ref|XP_003052186.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733125|gb|EEU46473.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 544

 Score =  264 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 127/525 (24%), Positives = 210/525 (40%), Gaps = 62/525 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K K   + P+G  D   K++ IR+ I ++I  +++ +G   I+TP+ E  + L    
Sbjct: 1   MAPKNKFELKTPKGTKDWEGKDMVIRDHIFNTITQVFKRHGGVTIDTPVFELREILAGKY 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K ++ L D  G+  SLRYDLT P AR++A N D                    
Sbjct: 61  GED---SKLIYDLADQGGEICSLRYDLTVPFARFLAMNKDIQNIKRYHIAKVYRRDQPAM 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+F QCD D  G+          + +   +         Y I +N+RKILDGI +
Sbjct: 118 TKGRMREFYQCDFDIAGTYDAMLPDAEVIRIISEVFEGLGWNGGYTIKMNHRKILDGIFQ 177

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  D    +   +  A+DKLDK     V+  + E              L     D +
Sbjct: 178 VCGVPED----KIRTISSAVDKLDKLPWADVRKEMTEE-----------KGLDGAVADRI 222

Query: 241 VSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ +  ++ + E     E +    + +KG  +L ++ E +       +R+    ++ R
Sbjct: 223 GEWVILKGKQDLLEKLQNNESLAANESMKKGMADLALLFEYLEAFNVL-DRVSFDLSLAR 281

Query: 298 GLEYYTGCVYEAILGFPVMN--------------------------EKQKPVVFGSVGGG 331
           GL+YYTG +YE +                                      V  GSV  G
Sbjct: 282 GLDYYTGLIYEVVTEGSAPQVAPGHEDEAPKPSKKKGKKGSDDDDRSGDPTVGVGSVAAG 341

Query: 332 GRYDGLVSRFK-GQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDHDSDS 389
           GRYD LV  F     +P  G S G+ R+    K+ + +  N+      V +  M      
Sbjct: 342 GRYDNLVGMFSGKNQIPCVGISFGVDRIFSITKARMAAEKNSAVRGNDVDVYVMAFGKGF 401

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +       L  AGI+AE           Q K A+    P AI  G  E + G ++IK+
Sbjct: 402 LKERMAVCTKLWEAGIKAEFLYKVKPKLPAQFKAAEANGVPFAIFLGDDEVASGKVKIKE 461

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           +         +++    +E     I + ++++   VK  LQ  +E
Sbjct: 462 M--------GLQDGHPEKEG----ILVALADMAKEVKVRLQRKRE 494


>gi|292900175|ref|YP_003539544.1| histidyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291200023|emb|CBJ47148.1| histidyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
          Length = 425

 Score =  264 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 105/474 (22%), Positives = 177/474 (37%), Gaps = 72/474 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  R+   ++ +  +YGF  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPAETAVWQRVEQVLKQVLSSYGFSEIRVPIVEQTPLFLRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ +SLR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLSLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR RQF Q   +  G      DAE+ MM A   +A+G                   N
Sbjct: 117 PQKGRSRQFHQIGAEVFGLQGPDIDAELIMMTARWWKALGIADHVVLELNSIGSLQARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHVEMLDE------------DCKRRMYSNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  +  +    L   +       +    L                  
Sbjct: 216 QALLNDAPTLGDYLDDESREHFAGLCRHLDAAGIAYRVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +          K    G+V  GGRYDGLV +  G   PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQLGGHATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       +    V +  +       S   +  + LR A   ++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFEPTRVVDVYVIAAGQGVQSAALLLAEQLRDALPELKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             LG   +F  Q   AD+    +A++ G  E + G L IKDL  G++ +    +
Sbjct: 362 SNLGGG-SFKKQFARADKWGARIALVIGEDEVANGQLVIKDLRTGEQQTLAQGD 414


>gi|83590513|ref|YP_430522.1| histidyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123752887|sp|Q2RHW0|SYH_MOOTA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|83573427|gb|ABC19979.1| histidyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 423

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 106/458 (23%), Positives = 186/458 (40%), Gaps = 52/458 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +    PRG  D   +E+     + ++ R +   YG+  I TP+ E+++   + + D  D 
Sbjct: 1   MLTSRPRGTEDILPEEVGRWYLLENTAREVSRLYGYREIRTPIFEHTELFNRGVGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + ++LR + TAP+ R   E+       P + + +GP+FR  +   GR
Sbjct: 61  VEKEMYTFIDRGDRSLTLRPEGTAPVVRAFVEHSLEARGLPVKLFYLGPMFRYGRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIG 183
            RQF Q  V+  GS     DAE+  +  D    +G+K  + H+             EK+ 
Sbjct: 121 LRQFHQFGVEAFGSRDPALDAEVIALAMDFYTRLGLKDLELHLNSVGCPACRPAHREKLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +   +L E            +F    +++   + ++    +  + A         + + 
Sbjct: 181 AYLRPRLEELCPTC-----QGRFERNPLRIF--DCKSPACQEIVREA-------PTVTAS 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D     H + E +K           L                       VRGL+YYT
Sbjct: 227 LCPDCAGHFHRVQEYLKALGIEFILDEHL-----------------------VRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E ++               S+GGGGRYDGLV+   G+ VP  GF +G+ R+++AL+
Sbjct: 264 KTAFEIMVKG--------IGAQSSIGGGGRYDGLVAALGGKQVPGIGFGLGLERVLLALE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                       G V +  +   +            LR AGIRA+      ++   Q+KY
Sbjct: 316 IQGQEP---PPEGGVDVLVVTAGTGVDLAAFRLLAGLRAAGIRADKDYLE-RSLKGQMKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           A+R    +A+I G  E +RG + ++ L  G +    + 
Sbjct: 372 ANRYPARMAVILGEEELARGRVSVRRLDAGSQEEVPLA 409


>gi|238018958|ref|ZP_04599384.1| hypothetical protein VEIDISOL_00818 [Veillonella dispar ATCC 17748]
 gi|237864442|gb|EEP65732.1| hypothetical protein VEIDISOL_00818 [Veillonella dispar ATCC 17748]
          Length = 423

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 183/467 (39%), Gaps = 60/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D   +++   + I   +R I + YGF+ I TP  E +    + + +  D 
Sbjct: 1   MAIRKPRGTQDFLPEQMINWHYIEQRMREICKVYGFNEIRTPAFEDTKLFLRGIGETTDV 60

Query: 66  PNKGVFSLQ--DDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGP 122
             K +++    DD G   +LR + TA   R   EN         + Y +GP+FR++K   
Sbjct: 61  VQKEMYTFTTGDDGGSSFTLRPENTASAVRAYLENKVYGKEGLTKWYYMGPMFRHDKPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR+RQF Q   + +GS +   D+E+  M+   L+  G+K      +       R +    
Sbjct: 121 GRYRQFHQFGAEVLGSQSPVVDSEVICMVVQLLKDFGLKDLNVEVNSVGCPTCRPVYREK 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L +      ++L          D  ++     +++L  + + +     + GA    E + 
Sbjct: 181 LIEFFEPKKEQL--------CSDCQERLYKNPLRIL--DCKNETCKSLSVGAPEIHEHL- 229

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                                      E+  +    +   +      + +  ++  +VRG
Sbjct: 230 --------------------------CEECHDHFEELKTYLTA---ANVQYTLNPRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E                  +V GGGRYDGLV    G + PA GF++G+ RL
Sbjct: 261 LDYYTKTAFEVQYT--------PLGAQSAVAGGGRYDGLVEELDGPHTPAIGFAMGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL+          E        +     +  +     Q L  A +  EM  G  K+  
Sbjct: 313 LLALEKQNLLPEPTVEPSA---FVVALGDVAKVEAFKICQALHDAYVTVEMD-GQGKSMK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            QLKYA++ N    II G  E +RG   I+ +   ++ +  +     
Sbjct: 369 AQLKYANKINAKYVIILGDDELARGEAIIRFMETSEQETVPLDTVSE 415


>gi|262040251|ref|ZP_06013502.1| histidine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042360|gb|EEW43380.1| histidine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 424

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 102/480 (21%), Positives = 184/480 (38%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI  S++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETALWQRIEGSLKQVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A     +G                   N
Sbjct: 117 PQKGRYRQFHQIGAEVFGLQGPDIDAELIMLTARWWRELGISEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAYLEQFTDKLDE------------DSKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L  L+                            R  
Sbjct: 216 QALLNDAPALGDYLDEESKAHFAGLCALLDDA-----------------------GIRYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  P  G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWVTTS--------LGSQGTVCAGGRYDGLVEQLGGRATPGVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       K    V I  +   +D+ S      + +R A  G++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFKADPVVDIYLVASGTDTQSAAMCLAEQVRDALPGVKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +   ++  +   
Sbjct: 362 TNHGGG-NFKKQFARADKWGARVALVVGESEIADGNVVVKDLRSGEQTTVTQESVAAHLR 420


>gi|114562295|ref|YP_749808.1| histidyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122300420|sp|Q085U5|SYH_SHEFN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|114333588|gb|ABI70970.1| histidyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 424

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 110/497 (22%), Positives = 198/497 (39%), Gaps = 81/497 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R+    +G+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKVEAVLRSSVSAFGYSEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +   ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNSDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G  +   DAE+ M+ A   + +GIK +     +       R  
Sbjct: 117 PQKGRYRQFHQFGVEVYGIGSADIDAEVLMLSARLWDLLGIKEHVALELNTLGDPAERAA 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +                 
Sbjct: 177 YRDALIAFLEQHKDKLDE--------DSQRRMYSNPLRVLDSKD---------PQVQAIL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L  D +     L EL+                            +  I+  
Sbjct: 220 GDAPALMDYLGEDSKTHFSTLCELLDA-----------------------VGIQYTINPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G++ PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTTS--------LGSQGTVLAGGRYDGLVGQLGGKDTPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R+++ L++LE +++   E   V +       + + +     Q LR     ++  M   
Sbjct: 309 LERIVLLLETLELTSDIAPE---VDVYVTAMGENCVVEAIKVAQELRQQLPTLKV-MSHC 364

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              NF  Q+K AD+     A+I G  E +   + IK L    E                 
Sbjct: 365 GGGNFKKQMKRADKSGAQFALIIGENEIANNQVAIKPLRTNNE----------------- 407

Query: 473 QITIPISELVSTVKKIL 489
           Q  +  SELV+ + +++
Sbjct: 408 QQLVTRSELVAKIAELI 424


>gi|253689382|ref|YP_003018572.1| histidyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511952|sp|C6DBH3|SYH_PECCP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|251755960|gb|ACT14036.1| histidyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 424

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 101/473 (21%), Positives = 189/473 (39%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI +S++ +   YG++ I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPAETALWQRIENSLKQVLSGYGYNEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGDSLTLRPEGTAGCVRAGIEHGILYNQEQRLWYVGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ +M A     +GI  +     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELILMTARWWRVLGIADHVKLELNSIGSLDARAR 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D+L+E        D L +     +++L  +              +  
Sbjct: 177 YREALVAFLEQHKDQLDE--------DCLRRMYTNPLRVLDTKN---------PQIQVLL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               ++  +L  +  +    L EL+  +                            ++  
Sbjct: 220 NDAPVLTDYLDDESREHFEALGELLTQS-----------------------GIPYTVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDG+V +  G   PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTTS--------LGAQGTVCAGGRYDGMVEQLGGHATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++S+     + K    V +  +   + +        + LR A   ++     G
Sbjct: 309 LERLVLLVQSVN---PDFKAQPGVDVYLISSGAGTQVAAMQLAEKLRDALPQLKLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q   AD+    +A++ G  E + G + +K+L+ G++ +    +  S
Sbjct: 366 GG-NFKKQFARADKWGARVALVLGENEVAAGQVVVKNLSNGEQDTLAQADVAS 417


>gi|323142308|ref|ZP_08077140.1| histidine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413192|gb|EFY04079.1| histidine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 419

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 95/467 (20%), Positives = 187/467 (40%), Gaps = 59/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D    ++     + +++R I   YG+  I TP+ E+++   + + D  D 
Sbjct: 1   MLTTAPRGTKDIMPSDVNAWRYLEETMRKICAQYGYKEIRTPVFEHTELFQRGIGDTTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K +++  D   + I+LR + TA   R   E+  +      + Y IGP+FR ++   GR
Sbjct: 61  VEKEMYTFTDRGNRSITLRPENTASAVRAYVEHKLSKDDAATKFYYIGPMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            R+F Q  V+ +G +    DAE+ ++    L+++G+K    + +       R      L+
Sbjct: 121 LREFHQFGVEALGVTGPNVDAEIILLAVQVLQSLGLKDLKLKINSVGCPKCRPQHREKLQ 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  D+L          D   +F    ++  L + +  +  +         E    +
Sbjct: 181 AFFKPNFDEL--------CKDCQGRFDRNPLR--LLDCKNPHCHEL-------GEGAPSL 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L  + ++    L +L+       +  + L                       VRGL+
Sbjct: 224 EECLCDECKEHFEGLKQLLTAAGVEYEVDHNL-----------------------VRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-VPATGFSIGISRLI 359
           YYT   +E                  +V GGGRYDGLV    G    P  GF++G+ R++
Sbjct: 261 YYTKTAFEIQYA--------PLGAQSAVCGGGRYDGLVQEISGDEARPGIGFAMGMERVL 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +AL+         + +   ++       ++ +        LR AG + E    + ++  +
Sbjct: 313 LALEKQNLLPEFDESIDAYVVCP---KQENFALAFKTAIELRRAGFKVEYDF-NGRSMKS 368

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           Q+K A++      +I G  E SR  + ++++A  ++    + +  S+
Sbjct: 369 QMKQANKFQAKQVLIFGEDELSRNAVTVRNMATSEQHEIAVNDIISY 415


>gi|294794000|ref|ZP_06759137.1| histidine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455570|gb|EFG23942.1| histidine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 423

 Score =  263 bits (672), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 103/467 (22%), Positives = 181/467 (38%), Gaps = 60/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D   +++   + I   +R I + YGF+ I TP  E +    + + +  D 
Sbjct: 1   MAIRKPRGTQDFLPEQMIHWHYIEQRMREICKVYGFNEIRTPAFEETKLFLRGIGETTDV 60

Query: 66  PNKGVFSLQ--DDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGP 122
             K +++    DD G   +LR + TA   R   EN         + Y +GP+FR++K   
Sbjct: 61  VQKEMYTFTTGDDGGSSFTLRPENTASAVRAYLENKVYGKEGLTKWYYMGPMFRHDKPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR+RQF Q   + +GS +   D+E+  M+   L+  G+K      +       R +    
Sbjct: 121 GRYRQFHQFGAEVLGSQSPVVDSEVICMVVQLLKDFGLKDLNVEVNSVGCPTCRPVYREK 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        ++L          D  ++     +++L  + + +     + GA    E + 
Sbjct: 181 LIAFFEPKKEQL--------CSDCQERLYKNPLRIL--DCKNETCKSLSVGAPEIHEHL- 229

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                                      E+  +    +   +      + +  ++  +VRG
Sbjct: 230 --------------------------CEECHDHFEELKTYLSA---ANVQYTLNPRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E                  +V GGGRYDGLV    G + PA GF++G+ RL
Sbjct: 261 LDYYTKTAFEVQYT--------PLGAQSAVAGGGRYDGLVEELDGPHTPAIGFAMGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL+          E     +  +     +  +     Q L    I  EM  G  K+  
Sbjct: 313 LLALEKQNLLPEPTVEPS---VFVVALGDAAKVEAFKICQALHDEYITVEMD-GQGKSMK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            QLKYA++ N    II G  E +R    I+ +   ++ +  +     
Sbjct: 369 AQLKYANKINAKYVIILGDDELARKEAIIRFMDTSEQETVSLDTVAE 415


>gi|256811168|ref|YP_003128537.1| histidyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794368|gb|ACV25037.1| histidyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 413

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 116/458 (25%), Positives = 203/458 (44%), Gaps = 48/458 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D   +E++ R  I + +R ++E YG+  I TP  E  + + K   +E R  K
Sbjct: 2   FQKPRGTRDFLPEEMKKRRFIENKLREVFERYGYKEILTPTFESFELIAKKTGEEIR--K 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ ++LR ++T+P+ R+       +  P R Y     FR E+   GRFR+F
Sbjct: 60  QLYVFKDHGGREMALRPEMTSPVVRFYLNELKNLQKPLRLYYFANCFRYERPQAGRFREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G     ADAE+  +  D L  + +   D+ + I +  +L G+LEK  +  ++
Sbjct: 120 WQMGCELIGCENPIADAEVLNLAMDGLININL---DFDVHIGHLGVLKGVLEKFNVSEEE 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID- 247
           ++                    ++ L+ +   DN   +     L  E+ +++   L    
Sbjct: 177 EV-------------------KIRRLIDKEDYDNLEAYLTQI-LGEEKKELIFEILKFKG 216

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + EL E++K      +  N L  I E V       ++  I+  I RGL+YYTG V+
Sbjct: 217 GREVLDELREILKDFPKSIEAINNLEEILEFV-----IHDKYTINLGIARGLDYYTGMVF 271

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                   + GGGRYD L+  F G+  PA GF+ G  R+++ +  LE 
Sbjct: 272 EIYGKKGAKQ----------ICGGGRYDNLIETFGGEPTPAVGFAYGFDRIMMNIDDLEI 321

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                 E   +L+  +  D + + K  +    LR +G   E  +   +     L YA+ R
Sbjct: 322 ------EEETILVIPVKKDKELIKKSLIIADKLRKSGKIVEFEI-MGRKLRKALDYANSR 374

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
                II G  E + G + +KD+  G++   +I    +
Sbjct: 375 GFKKVIIVGEKELNEGKVTLKDMITGEQRLVKIDELAN 412


>gi|225016790|ref|ZP_03705982.1| hypothetical protein CLOSTMETH_00702 [Clostridium methylpentosum
           DSM 5476]
 gi|224950458|gb|EEG31667.1| hypothetical protein CLOSTMETH_00702 [Clostridium methylpentosum
           DSM 5476]
          Length = 439

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 113/487 (23%), Positives = 187/487 (38%), Gaps = 57/487 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  KL  + PRG  D    E      I +   +    YGF  I  P  E+++   + +
Sbjct: 1   MNK-MKLLTKAPRGTQDTLPSESHKWQFIENLALDTARLYGFREIRVPTFEHTELFKRSV 59

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNE 118
            D  D   K +F+ +D  G+ +SLR + TA   R   EN       P +   +   FRNE
Sbjct: 60  GDTTDVVQKEMFTFEDRGGRSLSLRPEGTAGTVRAALENGLLGDALPVKLSYVVSCFRNE 119

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GRF++F Q  V+  G++A  ADAE+  +  D  E +GI+  +  I           
Sbjct: 120 RPQAGRFKEFHQFGVEMFGAAAPGADAEVIGVANDIFEQLGIQNLELQINSIGCPECRA- 178

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
             K      D  +  L  L       +  L+   + L + +     +  K A +      
Sbjct: 179 --KYQQALKDYFSAHLGTL---CGTCEERLEKNPMRLLDCKVPECAEIAKDAPV------ 227

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ ++  D  K        ++                              ++  IVRG
Sbjct: 228 -ILDYICNDCRKHFELTKVNLQA-----------------------MGIAFVVNPRIVRG 263

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT  V+E +                +V GGGRYDGLV    G+  PA GF++G+ RL
Sbjct: 264 LDYYTRTVFEFVSND--------LGAQSTVCGGGRYDGLVETLGGKPTPALGFAMGLERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L        + +      +       ++  K    T +LR  G   E      ++  
Sbjct: 316 LMILDKQGIELPSPQSCD---LYIASIGEEAALKAAQLTSLLRKEGFFVEFD-TVGRSLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            Q+KYAD+    L+++ G  E S    ++KD+  G+    E K+       +       +
Sbjct: 372 AQMKYADKLGAKLSMVIGDDEVSSCKAKLKDMGDGETKEVEFKDLPEAVYQKH------L 425

Query: 479 SELVSTV 485
            +L   V
Sbjct: 426 KDLADEV 432


>gi|312129379|ref|YP_003996719.1| histidyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311905925|gb|ADQ16366.1| histidyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 454

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 147/477 (30%), Positives = 231/477 (48%), Gaps = 52/477 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  L RG  D   + +  RN I D+I+ +Y+ +GF P+ETP +E    L GK+  + D  
Sbjct: 3   KPSLARGTRDFGPEVMAKRNFIFDNIKKVYKKFGFLPLETPSIENLSVLMGKYGEEGDQL 62

Query: 65  ---RPNKGVFSLQDDDGQWIS--------------LRYDLTAPLARYVAENFDTIVFPCR 107
                N G F+ +D     ++              LRYDLT P ARYVA N   +  P +
Sbjct: 63  LFKILNSGDFA-KDITEDSLTKGSKEVLKRISEKGLRYDLTVPFARYVAMNRQQLAIPFK 121

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GR+R+F QCD D VG+ +   +AE+ +M+ +   A+G+   ++ +
Sbjct: 122 RYQIQPVWRADRPQKGRYREFYQCDADVVGTDSLICEAEIVLMLHEVFAALGLT--EFVV 179

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRK+L GI E +G  G +       +  AIDKLDK G + V+  L E          
Sbjct: 180 KINNRKVLAGIAEAVGAAGKE-----ADLSVAIDKLDKIGKEKVEAELVER--------- 225

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYE-LVKGTIAGEKGFNELVVISELVRKSGYNS 286
                T E I  +    S+  EK +    +  +K +  G KG  EL  I  LV   G  S
Sbjct: 226 ---GFTPENIAALQPLFSLSEEKDIFSFLKTWLKDSATGLKGVEELESIWTLVDHLGLTS 282

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
            +I+   ++ RGL YYTG ++E          K   V  GS+ GGGRYD L   F    +
Sbjct: 283 PKIEFDPSLARGLSYYTGAIFEV---------KALNVSIGSISGGGRYDNLTGSFGVNGM 333

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
              G S+G+ R+   ++ L+             +   +   D+L+        +R AGI 
Sbjct: 334 SGVGISLGVDRIYDVMEELKLFP-EALNYSSTSVMVTNFGEDTLASSLGILSEIRNAGIS 392

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           AE++  S+K    Q +YAD++  P  +I GT E  +G  Q+K++  G++ +  +++ 
Sbjct: 393 AEIYPDSAK-MKKQFEYADKKGIPFVVIVGTEEIEKGQYQLKNMINGEQSALSLQDI 448


>gi|301753573|ref|XP_002912605.1| PREDICTED: probable histidyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 505

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 128/496 (25%), Positives = 220/496 (44%), Gaps = 49/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+    + P+G  D   +++ +R +ILD +   ++ +G   ++TP  E  + L +   ++
Sbjct: 52  KSNFIIKTPKGTRDLSPQQMVVREKILDLVIGCFKRHGAKRLDTPAFELKEMLTEKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ L+D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E     
Sbjct: 112 ---SGLIYDLKDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPTIV 165

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G++  D+ I +N+R+ILDG+L  
Sbjct: 166 QGRYREFCQCDFDIAGQFD-PMIPDAECLKIMCEILSGLQLGDFLIKVNDRRILDGMLAV 224

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  +IDKLDK     V+            +      L  E  D + 
Sbjct: 225 CGVPES----KFHAICSSIDKLDKISWNDVR-----------HEMVARKGLAPEVADRIG 269

Query: 242 SFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E      ++       +G  +L ++ E +   G    +I    ++ RG
Sbjct: 270 DYIQCHGGVSLVEEMFQDSILSQNKQAIEGLGDLKLLFEYLTLFGIAE-KISFDLSLARG 328

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGIS 356
           L+YYTG +YEA+L       ++     GSV  GGRYDGLV  F      VP  GFSIG+ 
Sbjct: 329 LDYYTGVIYEAVLLQTPAQAEESL-NVGSVAAGGRYDGLVGMFDPKGHKVPCVGFSIGVE 387

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    ++          +       + L +       L  AGI+AE+   ++  
Sbjct: 388 RIFAIVEQRMKTSGQKIRTTETQVFVATPQKNFLHERLKLISELWDAGIKAELLYKNNPK 447

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y +    PLA+I G  E   G+++++ +A  +E++                  I
Sbjct: 448 LLTQLHYCEHMGIPLAVIIGEQELKEGVIKLRSVASREEVA------------------I 489

Query: 477 PISELVSTVKKILQEN 492
               LV+ ++K L E+
Sbjct: 490 KRENLVAEIQKRLSES 505


>gi|15669189|ref|NP_247994.1| histidyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501004|sp|Q58406|SYH_METJA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|1591660|gb|AAB99003.1| histidyl-tRNA synthetase (hisS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 416

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 117/459 (25%), Positives = 205/459 (44%), Gaps = 48/459 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D   +E++ R  + + +R ++E YG+  I TP  E  + + K   +E R  K
Sbjct: 5   FQKPRGTRDFLPEEMKKRRFVENKLREVFERYGYKEILTPTFESFELIAKKTGEEIR--K 62

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ ++LR ++T+P+ R+       +  P R Y     FR E+   GRFR+F
Sbjct: 63  QLYVFKDHGGREMALRPEMTSPVVRFYLNELKNLQKPLRLYYFANCFRYERPQAGRFREF 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G     ADAE+  +  D L  +G+   D+ + I +  +L G+LEK  +  ++
Sbjct: 123 WQMGCELIGCKEPLADAEVLNLAMDGLINIGL---DFDVHIGHLGVLKGVLEKFNVSEEE 179

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           ++                    ++ L+ +   DN   +     L  E+ +++   L    
Sbjct: 180 EV-------------------KIRRLIDKEDYDNLKIYLTQI-LGEEKKELIFEILKFKG 219

Query: 249 -EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + EL E++K      +  N L  I E V       ++  I+  I RGL+YYTG V+
Sbjct: 220 SREVLDELKEILKDFPKSMEAINNLEEILEFV-----IHDKYTINLGIARGLDYYTGMVF 274

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                   + GGGRYD L+  F G+  PA GF+ G  R+++ +  L+ 
Sbjct: 275 EIYGKKGAKQ----------ICGGGRYDNLIETFGGEPTPAVGFAYGFDRIMMNIDDLDI 324

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                 E   +LI  +  D + + K  +    LR AG   E+ +   +     L YA+ R
Sbjct: 325 ------EEESILIIPVKKDKELIKKSLIIADKLRKAGKIVELEI-MGRKLRKALDYANSR 377

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
                II G  E + G + +KD+  G++    I    ++
Sbjct: 378 GFKKVIIVGEKELNEGKVTVKDMITGEQKLIGIDELTNF 416


>gi|153005174|ref|YP_001379499.1| histidyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152028747|gb|ABS26515.1| histidyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 415

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 89/459 (19%), Positives = 169/459 (36%), Gaps = 51/459 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    +      +    R ++  YG+  + TP++E +    + + +  D  
Sbjct: 4   KINGVKGMNDLLPGQASRWQEMEAVAREVFALYGYREVRTPVVEPAQLFARGVGEATDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR + TA   R   E+   +  P + + +GP+FR E+   GR+R
Sbjct: 64  KKEMYVFEDKGEELLALRPEGTAGTVRAFIEHGAFVEGPQKWFYVGPMFRRERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   +  G +    DAE   ++ D L  +G++       + +R      L+ +    
Sbjct: 124 QFHQIGCEAFGIAEPYLDAEQIALLDDYLARLGVRAELKLNSVGDRACRPAYLQDLRDFL 183

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +  E        D  ++     +++L  +          +       Q   ++  L  
Sbjct: 184 ASRKGEL-----CADCNERMERNPLRVLDCK---------VESCQPVLAQAPRLLERLCP 229

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +       +   +                            R  + + +VRGL+YY    
Sbjct: 230 ECASHFDAVKGGLDAL-----------------------GVRYTVDTRLVRGLDYYVRTA 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           YE                  +V GGGRYDGLV    G   P  GF++G  RL + L+   
Sbjct: 267 YEFT--------SDALGSQSAVAGGGRYDGLVETLGGPPTPGIGFALGQERLAMILEKAG 318

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +    +     ++  +  D++   +       LR AGI  E+          Q K A+R
Sbjct: 319 RAAPERRP----VVFFVSADAEGAREALRRAAELRRAGIACELD-ARGGKLKAQFKQAER 373

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
                A++ G  E   G  ++KDL   +E    + +  +
Sbjct: 374 VGARYALVLGGNEVQTGQAKLKDLQTREETPIALADLVA 412


>gi|261212140|ref|ZP_05926426.1| histidyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838748|gb|EEX65399.1| histidyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 422

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 105/479 (21%), Positives = 186/479 (38%), Gaps = 73/479 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++   ++N+   YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAEHVRLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRSALIEYLEQYQNVLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+                               
Sbjct: 216 QAILGDAPQLSDYLDAESKQHFAGLCELLDAA-----------------------GIEYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWIT--------ESLGSQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++L ++         V +  +     ++       + LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLGNTEVRRS----VDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
              G   NF  Q K AD+    +A++ G  E +   + +KDLA G++ +          
Sbjct: 361 THFGGG-NFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGEQSTVAQAEVAQLL 418


>gi|18079343|ref|NP_542367.1| probable histidyl-tRNA synthetase, mitochondrial precursor [Mus
           musculus]
 gi|81903098|sp|Q99KK9|SYHM_MOUSE RecName: Full=Probable histidyl-tRNA synthetase, mitochondrial;
           AltName: Full=Histidine--tRNA ligase; Short=HisRS;
           AltName: Full=Histidine--tRNA ligase-like; Flags:
           Precursor
 gi|13435454|gb|AAH04596.1| Histidyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus]
 gi|148664765|gb|EDK97181.1| histidyl-tRNA synthetase-like, isoform CRA_b [Mus musculus]
          Length = 505

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 130/496 (26%), Positives = 231/496 (46%), Gaps = 48/496 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     ++P+G  D   +++ +R +ILD I + ++ +G   ++TP  E  + L +   D 
Sbjct: 51  KPNFVIKVPKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDN 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
                 ++ L+D  G+ +SLRYDLT P ARY+A N        + Y++G V+R E     
Sbjct: 111 FGL---MYDLKDQGGELLSLRYDLTVPFARYLAMNKL---KKMKRYQVGKVWRRESPAIA 164

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G          C+ +   + + G++  D+ I +N+R+++DGI   
Sbjct: 165 QGRYREFCQCDFDIAGEFDPMIPDAECLRIMCEILS-GLQLGDFLIKVNDRRVVDGIFAV 223

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  ++DKLDK   +GV+            +      L  E  D + 
Sbjct: 224 CGVPES----KLRTICSSMDKLDKMSWEGVR-----------HEMVAKKGLAPEVADRIG 268

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            F+      S+ E       +  +    +G  +L ++ E +R  G  +++I +  ++ RG
Sbjct: 269 DFVQYHGGISLVEDLFKDPRLSQSQLALQGLGDLKLLFEYLRLFGI-ADKISLDLSLARG 327

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGIS 356
           L+YYTG +YEA+L        ++ +  GSV  GGRYD LV++F     +VP  G SIG+ 
Sbjct: 328 LDYYTGVIYEAVLLESPAQAGKETLSVGSVAAGGRYDNLVAQFDPKGHHVPCVGLSIGVE 387

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++     +          +       + L +       L  AGI+AEM   ++  
Sbjct: 388 RIFYLVEQKMKMSGEKVRTTETQVFVATPQKNFLQERLKIIAELWDAGIKAEMLYKNNPK 447

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL Y ++ + PL +I G  ER+ G+++++ +A  +E+                  TI
Sbjct: 448 LLTQLHYCEKADIPLMVIIGEQERNEGVIKLRSVASREEV------------------TI 489

Query: 477 PISELVSTVKKILQEN 492
               LV+ ++K L E+
Sbjct: 490 NRESLVAEIQKRLSES 505


>gi|258508557|ref|YP_003171308.1| histidyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148484|emb|CAR87457.1| Histidyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649864|dbj|BAI42026.1| histidyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 427

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 107/477 (22%), Positives = 192/477 (40%), Gaps = 61/477 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD    +     ++    R I+  Y +  I TP+ E  D   + + D  D 
Sbjct: 1   MNYQRPKGTADILPGQSERWQQVEAVARKIFAQYQYREIRTPIFENVDVFSRSVGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K +++ +D   + ++LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYTFEDKGDRMMALRPEGTAGVVRAYVENKLYGPEYAKPYKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR RQF Q  V+  GS +   DAE   +    LEA+G K   + I        RK     
Sbjct: 121 GRQRQFHQIGVEAFGSDSPVLDAETLALAKQLLEALGAKHLKFVINSLGDPATRKAFHAA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  + + D                 
Sbjct: 181 LVDYLTPFKDELSE--------DSKVRLVKNPLRILDSKDKHDQE---------IVADAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ + ++    +  L+ G                            ++ +T+VRG
Sbjct: 224 SILDYLTPEAQQHFDRVKSLLTGL-----------------------GIEFEVDATMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E +      ++K     + ++  GGRY+GLV    G   P  GF++G+ RL
Sbjct: 261 LDYYNHTIFEVM-----SDDKVFGGGYTTILAGGRYNGLVEELGGPETPGIGFAMGVERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++      +         I T+D  +D   +       LR  G   EM     +   
Sbjct: 316 MLLMQ-----GDQQPVQPDAYIVTIDQGAD--QEALQMLTALRQQGFTGEMDY-MGRKAK 367

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            Q K A++ N  L +  G  ER  G +Q+K++A G++ +    +  +       Q+T
Sbjct: 368 GQFKAANKANAKLVLTIGESEREAGTVQVKNMATGQQKAFPQADVLADFSKIYTQVT 424


>gi|300121084|emb|CBK21466.2| unnamed protein product [Blastocystis hominis]
          Length = 917

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 125/487 (25%), Positives = 215/487 (44%), Gaps = 55/487 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + +LP+G  D   +++ IR+R+   IR ++E +G   ++TP+ E  ++L     ++   +
Sbjct: 446 KPKLPKGTRDFTPEQMAIRHRLFSQIRAVFERHGGVELDTPVFEEKETLTGKYGED---S 502

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+ ++LRYDLT P ARY+A +  + +             N     GRFR+
Sbjct: 503 KLIYDLADQGGELLALRYDLTVPFARYLAVHGVSQLKRFHIA-KVYRRDNPATSKGRFRE 561

Query: 128 FIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           F QCD+D        TADA++     +  E VG+   +  + IN+R +LDG++E  G+  
Sbjct: 562 FTQCDLDVAGAYDDMTADADVIAAGIEVYEEVGV--GNIAVKINHRALLDGMMEICGVP- 618

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   +  AIDKLDK   + V+  + E              L +E  D +  F+ I
Sbjct: 619 ---AGKVRAIGSAIDKLDKEPWEAVRFEMTEK-----------KGLPAEVADRIREFVEI 664

Query: 247 DLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                      E    ++   A       +  +   +   G+ + ++    ++ RGL+YY
Sbjct: 665 RGTPWEVLERLEAMPCMRSHGAAWAALASMRRLFGYLEAMGHLA-KLSFDMSLARGLDYY 723

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK--GQNVPATGFSIGISRLIV 360
           TG +YE +L          P   GS+G GGRYD LV  F   G+ +P  G SIG+ R+  
Sbjct: 724 TGVIYEVVLL-------DNPYGVGSIGAGGRYDKLVGMFSASGKQIPCVGISIGVERVFT 776

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+  +++        P  +       +  ++      ML   GI+AE    ++     Q
Sbjct: 777 ILE-KKAADEGTLRCAPCDVFVASAGKELAAQRMRIAGMLWRNGIKAEFGYQANPKLQKQ 835

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           L YA        ++ G  E  +G + +K+L   +E+                  TIP+  
Sbjct: 836 LTYALESGVKWIVVVGEEEMKQGKVNLKNLQTREEV------------------TIPVES 877

Query: 481 LVSTVKK 487
           +V  +KK
Sbjct: 878 VVDELKK 884


>gi|149190089|ref|ZP_01868366.1| histidyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148836119|gb|EDL53079.1| histidyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 422

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 107/472 (22%), Positives = 194/472 (41%), Gaps = 55/472 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++ ++++++   YG++ +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKVENTVKHVVSAYGYNEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF QC V+  G +    DAE+ MM A     +GI      + +N+   L+   
Sbjct: 117 PQKGRYRQFHQCGVEVFGLNGPDVDAELIMMTARLWRELGI-AEHVRLELNSIGSLEARA 175

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +         L + + VL   D   +     +++L  +                      
Sbjct: 176 D-YRTALIAHLEQHIDVLD-EDSKRRMYTNPLRVLDSKN---------PDVQAILVDAPE 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +L  D ++    L EL+                               ++  +VRGL
Sbjct: 225 LSDYLDADSKQHFAGLCELLDAA-----------------------GIEYTVNQRLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E I         +     G+V GGGRYDGLV +  G+  PA GF++G+ RL+
Sbjct: 262 DYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPAVGFAMGLERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + +++LE +         V    +     ++       + LR A  GIR  M      NF
Sbjct: 314 LMMETLELTDVRRS----VDAYVVTAGEGTMMAGMKLAESLREAIPGIRV-MNHFGGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             Q K AD+     A++ G  E +   + +KDL  G++ +       +    
Sbjct: 369 KKQFKRADKVGAVYALVLGENEVAENTVVVKDLQGGEQETIAQTELAAKLAD 420


>gi|294140147|ref|YP_003556125.1| histidyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326616|dbj|BAJ01347.1| histidyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 424

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 114/503 (22%), Positives = 197/503 (39%), Gaps = 93/503 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R     YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKLEAVLRETVSAYGYSEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   ++        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFDDRNGDSLTLRPEGTASTVRAGNQHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ M+ A   E +GI            D      
Sbjct: 117 PQKGRYRQFNQFGVEVYGIGTADVDAEVLMLSARLWEKLGITDHVTLELNTLGDPAERAT 176

Query: 171 NRKILDGILEKI--GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
            R+ L   LE+    L  + +       LR +D  +      V+ LL +           
Sbjct: 177 YREALIAYLEQFKEQLDEESQRRMYTNPLRVLDTKNP----EVQALLVD----------- 221

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
                      ++ +L  +       L EL+                            +
Sbjct: 222 --------APELMDYLGEETRAHFSHLCELLDA-----------------------VGIK 250

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
             I+  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+N PA
Sbjct: 251 YVINPRLVRGLDYYNRTVFEWVTTS--------LGSQGTVLAGGRYDGLVEQLGGKNTPA 302

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIR 406
            GF++G+ R+++ L++LE + +       V +        S  +     Q LRT   G+R
Sbjct: 303 VGFAMGLERIVLMLETLELTDDI---PATVDVYVTAMGDASKVEAIKIAQALRTELPGLR 359

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             M      NF  Q+K AD+    +A++ G  E +   + +K L + KE           
Sbjct: 360 V-MSHCGGGNFKKQMKRADKSGALIALVIGEDELASNQVAVKYLREKKE----------- 407

Query: 467 REARVAQITIPISELVSTVKKIL 489
                 Q  +    L + + +++
Sbjct: 408 ------QALVARDGLATYIAELI 424


>gi|126663425|ref|ZP_01734422.1| histidyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126624373|gb|EAZ95064.1| histidyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 474

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 143/501 (28%), Positives = 222/501 (44%), Gaps = 70/501 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D    E+  RN I  +I+  +E +GF PIETP  E S++L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPAEVAKRNYIFSTIKTNFEKFGFQPIETPSFENSETLMGKYGEEGDRL 63

Query: 65  ---RPNKGVFSL-------------------QDDDGQWI-------------SLRYDLTA 89
                N G +                     +D   + +             +LRYDLT 
Sbjct: 64  IFKILNSGNYFFNKNKIEIPVSIDDLQVKSAEDISKEELIQLNQFTSKISEKALRYDLTV 123

Query: 90  PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCM 149
           P ARYV ++ + I FP + Y+I PV+R ++   GRFR+F QCD D VGS++   + E+  
Sbjct: 124 PFARYVVQHQNEIEFPFKRYQIQPVWRADRPQKGRFREFYQCDADVVGSNSLWQEVELVQ 183

Query: 150 MMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQ 209
           +       +G+      I INNRKIL GI E IG          +    A+DKLDK G  
Sbjct: 184 LYDSVFSQLGLNG--VTIKINNRKILSGIAEVIGASDK-----LIDFTVALDKLDKIGED 236

Query: 210 GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEK 267
           GVK  + E              ++   I+ +    +      + + +L  L+  +  G K
Sbjct: 237 GVKKEMLEK------------GISETAIEKVQPLFNFTGTINEKIEKLAVLLANSEEGMK 284

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
           G NEL  I + V   G  +  + +  T+ RGL YYTG ++E            K V  GS
Sbjct: 285 GVNELQFICDNVSTLGLQTAFLDLDVTLARGLNYYTGAIFEV--------AAPKGVAMGS 336

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           +GGGGRYD L   F  +N+   G S G+ R+ + ++ L      +      L        
Sbjct: 337 IGGGGRYDDLTGIFGLKNMSGVGISFGLDRIALVIEELGLFPEAVLATSKALFLNFGDKE 396

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                       LR AGI+ E++  ++K  G Q ++AD+R  P  ++ G  E       I
Sbjct: 397 AL--YAMQAIGKLRQAGIKVELYPDNAK-IGKQFQHADKRGIPFTVLVGEEEIQNNQYAI 453

Query: 448 KDLAKGKELSREIKNNESWRE 468
           K+LA G++   + +   +  +
Sbjct: 454 KNLASGEQQKVDFETLVALLK 474


>gi|313633167|gb|EFS00051.1| histidyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 427

 Score =  262 bits (670), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 104/464 (22%), Positives = 190/464 (40%), Gaps = 59/464 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +LPRG  D   +E+   + +  +   + ENY ++ I TP+ E+++   + + D  D  +K
Sbjct: 2   QLPRGTRDILPEEVTKWHFLEAAFAAVCENYQYEEIRTPIFEHTELFERGVGDSTDIVSK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRFR 126
            +++ QD  G+ ++LR + TA + R   E+        P + Y   P+FR E+   GR R
Sbjct: 62  EMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGAVSQPIKMYYNEPMFRYERPQGGRQR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-----NNRKILDGILEK 181
           QF Q  ++ +GS     D E+  +  +  + +G++     I       +  K  + ++  
Sbjct: 122 QFTQMGIEAIGSDDPAIDVEVISLAMEFFKRIGLRNIKLVINSLGDKESRLKHREALVSH 181

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
              H D+   E  + L             +++L  +   D         N   +    ++
Sbjct: 182 FEPHIDEFCAECQVRLH---------KNPLRILDCKKDHD---------NPLIQTAPSIL 223

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L+ +     +++   +                              +I  T+VRGL+Y
Sbjct: 224 DYLNEESVAYFNQVQSYLNALE-----------------------ISFEIDPTMVRGLDY 260

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++A
Sbjct: 261 YNHTTFEIMSEEEGFGAK------TTLCGGGRYHGLVKEFGGPDTPGIGFGIGVERILLA 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+  +     I    P+ +  +    ++  K       LR  GI AE      +    QL
Sbjct: 315 LEKADV---KIPAKKPLEVYVITAQPEAELKAVTLVNKLRKNGISAEKDY-LKRKLKAQL 370

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           K A+R+N    II G  E   G  Q+K++  G++        E+
Sbjct: 371 KDANRKNAVYTIILGEEELQTGNYQLKNMETGEQEIVFEDTLET 414


>gi|312173201|emb|CBX81456.1| Histidyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 450

 Score =  262 bits (670), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 104/474 (21%), Positives = 177/474 (37%), Gaps = 68/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    E  +  R+   ++ +  +YGF  I  P++E +    + + +  D  
Sbjct: 29  NIQAIRGMNDYLPAETAVWQRVEQVLKQVLSSYGFSEIRVPIVEQTPLFLRAIGEVTDVV 88

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G+ +SLR + TA   R   E+        R + IGP+FR E+   GR R
Sbjct: 89  EKEMYTFDDRNGESLSLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYERPQKGRSR 148

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDG 177
           QF Q   +  G      DAE+ MM A   +A+G                   N R  L  
Sbjct: 149 QFHQIGAEVFGLQGPDIDAELIMMTARWWKALGIADHVVLELNSIGSLQARANYRDALVA 208

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE+     D+            D   +     +++L  +                    
Sbjct: 209 FLEQHVEMLDE------------DCKRRMYSNPLRVLDSKN---------PDVQALLNDA 247

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  +L  +  +    L   +       +    L                       VR
Sbjct: 248 PTLGDYLDDESREHFAGLCRHLDAAGIAYRVNQRL-----------------------VR 284

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +          K    G+V  GGRYDGLV +  G   PA GF++G+ R
Sbjct: 285 GLDYYNRTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQLGGHATPAVGFAMGLER 336

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           L++ ++++       +    V +  +       S   +  + LR A   ++    LG   
Sbjct: 337 LVLLVQAVN---PEFEPTRVVDVYVIAAGQGVQSAALLLAEQLRDALPELKLMSNLGGG- 392

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +F  Q   AD+    +A++ G  E + G L IKDL  G++ +    +  +   A
Sbjct: 393 SFKKQFARADKWGARIALVIGEDEVANGQLVIKDLRTGEQQTLAQGDAATVLAA 446


>gi|327439656|dbj|BAK16021.1| histidyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 422

 Score =  262 bits (670), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 90/463 (19%), Positives = 173/463 (37%), Gaps = 49/463 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++P+G  D    +      +   IR++ E Y ++ I TP+ E ++   + + D  D 
Sbjct: 1   MNFKVPKGTQDILPGQSEKWQYVERVIRDLCEKYRYNEIRTPMFESTELFQRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++  D   + ++LR + TA   R   E+        P + Y  GP+FR E+   G
Sbjct: 61  VQKEMYTFTDKGNRSLTLRPEGTASAVRAYVEHKMFGQADQPVKLYYTGPMFRYERQQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  V+ +GS+    DAE+  +  D    +G+      I     K          
Sbjct: 121 RYRQFVQFGVEAIGSADPAIDAEVMALAMDVYTTLGLSDLKLVINSLGDKDTRDAHRSAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +    +    ++     D   +     +++L  +    +    T            + ++
Sbjct: 181 I----EHFTPVVGELCSDCQSRLEKNPLRILDCKVDAKHPAMAT---------APALTNY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+    +   ++ + +                              ++   +VRGL+YY 
Sbjct: 228 LTDSSAEYFTKVKQYLD-----------------------VLGISYEVDPNLVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E ++               ++ GGGRY+GLV    G   P  GF++ I RL++AL+
Sbjct: 265 HTAFEIMITGEGF------GSITTLCGGGRYNGLVEDIGGPESPGIGFALSIERLLLALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +          +       +    ++  K        R  GI A+M     +    Q+K 
Sbjct: 319 AKNIELATGNNLEM---YVVAMGEEAKLKAVELVSSFRAKGISADMDY-LDRKMKAQMKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           ADR N    I+ G  E     + +K +  G +   E      +
Sbjct: 375 ADRANAKFVIVLGESELEEQAVNVKTMETGDQTKVEFGQLVQY 417


>gi|294792129|ref|ZP_06757277.1| histidine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457359|gb|EFG25721.1| histidine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 452

 Score =  262 bits (670), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 105/481 (21%), Positives = 186/481 (38%), Gaps = 60/481 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D   +++   + I   +R I + YGF+ I TP  E +    + + +  D 
Sbjct: 1   MAIRKPRGTQDFLPEQMINWHYIEQRMREICKIYGFNEIRTPAFEETKLFLRGIGETTDV 60

Query: 66  PNKGVFSLQ--DDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGP 122
             K +++    DD G   +LR + TA   R   EN         + Y +GP+FR++K   
Sbjct: 61  VQKEMYTFTTGDDGGSSFTLRPENTASAVRAYLENKVYGKEGLTKWYYMGPMFRHDKPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR+RQF Q   + +GS +   D+E+  M+   L+  G+K      +       R +    
Sbjct: 121 GRYRQFHQFGAEVLGSQSPVVDSEVICMVVQLLKDFGLKDLNVEVNSVGCPICRPVYREK 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        ++L          D  ++     +++L  + + +     + GA    E + 
Sbjct: 181 LIAFFEPKKEQL--------CSDCQERLYKNPLRIL--DCKNETCKSLSIGAPEIHEHL- 229

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                                      E+  +    +   +      + +  ++  +VRG
Sbjct: 230 --------------------------CEECHDHFEELKTYLTA---ANVQYTLNPRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E                  +V GGGRYDGLV    G + PA GF++G+ RL
Sbjct: 261 LDYYTKTAFEVQYT--------PLGAQSAVAGGGRYDGLVEELDGPHTPAIGFAMGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL+          E        +     +  +     Q LR+  I  EM  G  K+  
Sbjct: 313 LLALEKQNLLPEPTVEPSA---FVVALGDAAKVEAFKICQKLRSLDIPVEMD-GQGKSMK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            QLKYA++ N    II G  E +R    I+ +   ++ +  +       +A++       
Sbjct: 369 AQLKYANKINAKYVIILGDDELARKEAIIRFMDTSEQETVSLNIVAEDIKAKINDEKFTQ 428

Query: 479 S 479
            
Sbjct: 429 E 429


>gi|291513956|emb|CBK63166.1| histidyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 448

 Score =  262 bits (670), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 139/474 (29%), Positives = 228/474 (48%), Gaps = 45/474 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDED-- 64
           +  +P+G  D    E+  R  I D+IR ++  YGF P+ETP +E     LGK+  + D  
Sbjct: 3   KPSIPKGTRDFSPAEMMRRQYIFDTIRRVFRAYGFAPLETPSMENLSTLLGKYGDEGDKL 62

Query: 65  ---RPNKGVFS--LQDDDGQWIS------LRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
                N G ++  L D++ +  S      LRYDLT P ARYV ++   + FP + Y+I P
Sbjct: 63  LFKILNSGDYAAGLSDEEVRSASKICEKGLRYDLTVPFARYVVQHQGELTFPFKRYQIQP 122

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GR+R+F QCDVD +G+ +   + E+  ++    +A+GI+     + +NNRK
Sbjct: 123 VWRADRPQKGRYREFYQCDVDVIGTRSLLCEVELVEIVERVFKALGIRVA---LKMNNRK 179

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL GI E IG       ++ + +  AIDKL+K GL  VK  L E   D            
Sbjct: 180 ILFGIAEAIG-----HADKMMDITIAIDKLEKIGLDNVKAELMERGLDRE---------A 225

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            +++  ++  LS D  + +++L E++  +  G KG  E+  +   V + G     +++  
Sbjct: 226 VDKLQPILE-LSGDNAQKLNQLKEVLAVSETGMKGIEEMETVFGYVGRLGIGL-TVELDL 283

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           ++ RGL YYTG ++E          K      GS+ GGGRYD L   F   N+   G S 
Sbjct: 284 SLARGLNYYTGAIFEV---------KALDFAIGSICGGGRYDDLTGIFGMPNMSGVGISF 334

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G  R+   +  L      +     VL   +  + +  +      + LR   I AE++  +
Sbjct: 335 GADRIYDVMTGLSLFPEEVNSSTRVLFVNLGAEEE--AAVLPLLRQLRGREIAAEIYPEA 392

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            K    Q++YA+RR  P  +I G+ E   G   +KD+  G++    +    +  
Sbjct: 393 GK-MKKQMEYANRRGIPYVVIVGSQELEAGAATVKDMRTGEQRQVSLDKLATEI 445


>gi|146312649|ref|YP_001177723.1| histidyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980047|sp|A4WD92|SYH_ENT38 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|145319525|gb|ABP61672.1| histidyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 424

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 108/497 (21%), Positives = 194/497 (39%), Gaps = 82/497 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKQVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G      DAE+ M+ A     +GI ++     +    +  R  
Sbjct: 117 PQKGRYRQFNQLGVEVFGLQGPDIDAELIMLTARWWRELGISQHVALELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +          +      
Sbjct: 177 YRDALVAFLELHKDKLDE--------DCQRRMYSNPLRVLDSKN---------QDVQALL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +       L +L++           L                      
Sbjct: 220 NDAPALGDYLDEESRDHFAGLCKLLEAAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTTS--------LGSQGTVCAGGRYDGLVEQLGGRAAPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +D+ S    + + +R A  G++     G
Sbjct: 309 LERLVLLVQAVN---PEFKAESVVDIYLVASGADTQSAAMKFAERVRDALPGVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              NF  Q   AD+    +A++ G  E + G + +KDL  G++                 
Sbjct: 366 GG-NFKKQFARADKWGASVALVLGESEVAAGEVVVKDLRSGEQT---------------- 408

Query: 473 QITIPISELVSTVKKIL 489
             T+    + + ++ +L
Sbjct: 409 --TVTQDGVAAHLRTLL 423


>gi|15640779|ref|NP_230409.1| histidyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591433|ref|ZP_01678711.1| histidyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121726005|ref|ZP_01679304.1| histidyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147674318|ref|YP_001216245.1| histidyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153216233|ref|ZP_01950333.1| histidyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153800575|ref|ZP_01955161.1| histidyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|153817271|ref|ZP_01969938.1| histidyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153822725|ref|ZP_01975392.1| histidyl-tRNA synthetase [Vibrio cholerae B33]
 gi|153824620|ref|ZP_01977287.1| histidyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|153828282|ref|ZP_01980949.1| histidyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|227080939|ref|YP_002809490.1| histidyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505626|ref|ZP_04395136.1| histidyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510702|ref|ZP_04400181.1| histidyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229513101|ref|ZP_04402567.1| histidyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229517824|ref|ZP_04407268.1| histidyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229523418|ref|ZP_04412825.1| histidyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229530110|ref|ZP_04419500.1| histidyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229608644|ref|YP_002879292.1| histidyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254847897|ref|ZP_05237247.1| histidyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255744566|ref|ZP_05418517.1| histidyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262192499|ref|ZP_06050650.1| histidyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|297581159|ref|ZP_06943083.1| histidyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|298499107|ref|ZP_07008914.1| histidyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|31077006|sp|Q9KTX0|SYH_VIBCH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|172047440|sp|A5F3G1|SYH_VIBC3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|254782354|sp|C3LT13|SYH_VIBCM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|9655206|gb|AAF93925.1| histidyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121546710|gb|EAX56887.1| histidyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121631487|gb|EAX63857.1| histidyl-tRNA synthetase [Vibrio cholerae V52]
 gi|124114378|gb|EAY33198.1| histidyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124123864|gb|EAY42607.1| histidyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|126512187|gb|EAZ74781.1| histidyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126519756|gb|EAZ76979.1| histidyl-tRNA synthetase [Vibrio cholerae B33]
 gi|146316201|gb|ABQ20740.1| histidyl-tRNA synthetase [Vibrio cholerae O395]
 gi|148876236|gb|EDL74371.1| histidyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|149741838|gb|EDM55867.1| histidyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|227008827|gb|ACP05039.1| histidyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227012584|gb|ACP08794.1| histidyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229333884|gb|EEN99370.1| histidyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229339781|gb|EEO04796.1| histidyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229344539|gb|EEO09513.1| histidyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229349994|gb|EEO14948.1| histidyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350667|gb|EEO15608.1| histidyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357849|gb|EEO22766.1| histidyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371299|gb|ACQ61722.1| histidyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254843602|gb|EET22016.1| histidyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255737597|gb|EET92991.1| histidyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262031658|gb|EEY50245.1| histidyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|297534475|gb|EFH73312.1| histidyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297543440|gb|EFH79490.1| histidyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 422

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 186/476 (39%), Gaps = 73/476 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++   ++N+   YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALIDYLEQYQNVLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+                               
Sbjct: 216 QAILGDAPQLSDYLDAESKQHFAGLCELLDAA-----------------------GIEYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWIT--------ESLGSQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++L ++         V +  +     ++       + LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLGNTDVRRS----VDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              G   NF  Q K AD+    +A++ G  E +   + +KDLA G++ +       
Sbjct: 361 THFGGG-NFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGEQNTVAQAEVA 415


>gi|269140144|ref|YP_003296845.1| histidyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985805|gb|ACY85634.1| histidyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304559978|gb|ADM42642.1| Histidyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 424

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 100/479 (20%), Positives = 177/479 (36%), Gaps = 72/479 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  +   I  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTALWQPIEAALKQVLASYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G +    DAE+ MM A   + +G                    
Sbjct: 117 PQKGRYRQFHQLGAEVFGLAGPDIDAEIIMMTARWWKVLGIADHVALELNSIGSLEARAA 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAYLEQYKNQLDE------------DCQRRMYSNPLRVLDSKN---------PQV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                +   +  +L  D  +    L  L+            L                  
Sbjct: 216 QALLNEAPRLSEYLDADSREHFDGLCRLLDDAGIAYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV++  G   PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTTS--------LGAQGTVCAGGRYDGLVAQLGGHATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++     +      V +  +     + S      + LR A   +R  
Sbjct: 305 FAMGLERLVLLVQAVN---PDFLPQRAVEVYLIAAGEGTQSAAMRLAEQLRDALPQLRLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
              G   NF  Q   AD+    +A++ G  E   G + +K LA G++ +       +  
Sbjct: 362 TNYGGG-NFKKQFARADKWGARIALVLGESEVQNGQVNVKCLASGEQQTVAQDQAATLL 419


>gi|254285478|ref|ZP_04960442.1| histidyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150424340|gb|EDN16277.1| histidyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 422

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 187/476 (39%), Gaps = 73/476 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++   ++N+   YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +     +       
Sbjct: 177 YRTALIDYLEQYQNVLDE------------DCKRRMYTNPLRVLDSKNPYVQA------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+                               
Sbjct: 218 --ILGDAPQLSDYLDAESKQHFAGLCELLDAA-----------------------GIEYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWIT--------ESLGSQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++L ++         V +  +     ++       + LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLGNTDVRRS----VDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              G   NF  Q K AD+    +A++ G  E +   + +KDLA G++ +       
Sbjct: 361 THFGGG-NFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGEQNTVAQAEVA 415


>gi|199599331|ref|ZP_03212729.1| Histidyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|229552367|ref|ZP_04441092.1| histidine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539738|ref|YP_003174237.1| histidyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|199589770|gb|EDY97878.1| Histidyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|229314269|gb|EEN80242.1| histidine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151414|emb|CAR90386.1| Histidyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 427

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 107/477 (22%), Positives = 191/477 (40%), Gaps = 61/477 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD    +     ++    R I+  Y +  I TP+ E  D   +   D  D 
Sbjct: 1   MNYQRPKGTADILPGQSERWQQVEAVARKIFAQYQYREIRTPIFENVDVFSRSAGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K +++ +D   + ++LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYTFEDKGDRMMALRPEGTAGVVRAYVENKLYGPEYAKPYKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR RQF Q  V+  GS +   DAE   +    LEA+G K   + I        RK     
Sbjct: 121 GRQRQFHQIGVEAFGSDSPVLDAETLALAKQLLEALGAKHLKFVINSLGDPATRKAFHAA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  + + D                 
Sbjct: 181 LVDYLTPFKDELSE--------DSKVRLVKNPLRILDSKDKHDQE---------IVADAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ + ++    +  L+ G                            ++ +T+VRG
Sbjct: 224 SILDYLTPEAQQHFDRVKSLLTGL-----------------------GIEFEVDATMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E +      ++K     + ++  GGRY+GLV    G   P  GF++G+ RL
Sbjct: 261 LDYYNHTIFEVM-----SDDKVFGGGYTTILAGGRYNGLVEELGGPETPGIGFAMGVERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++      +         I T+D  +D   +       LR  G   EM     +   
Sbjct: 316 MLLMQ-----GDQQPVQPDAYIVTIDQGAD--QEALQMLTALRQQGFTGEMDY-MGRKAK 367

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            Q K A++ N  L +  G  ER  G +Q+K++A G++ +    +  +       Q+T
Sbjct: 368 GQFKAANKANAKLVLTIGESEREAGTVQVKNMATGQQKAFPQADVLADFSKIYTQVT 424


>gi|212634300|ref|YP_002310825.1| histidyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226737078|sp|B8CKR2|SYH_SHEPW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|212555784|gb|ACJ28238.1| Histidyl-tRNA synthetase, class IIa [Shewanella piezotolerans WP3]
          Length = 424

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 106/500 (21%), Positives = 189/500 (37%), Gaps = 89/500 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  I  ++   +R     YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPIWQKLETVLRETVSAYGYSEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFDDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G  +   DAE+ M+ A   E +GI            D      
Sbjct: 117 PQKGRYRQFHQFGVEVYGIPSADIDAEVLMLSAMLWEKLGITEHVTLELNTLGDSEERAA 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +     +       
Sbjct: 177 YRDALIAFLEQHKDVLDE------------DSQRRMYSNPLRVLDSKNAAVQA------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    ++ +L  +       L EL++                           +  
Sbjct: 218 --LLADAPALMDYLGEETRSHFSHLCELLEA-----------------------VGIQYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G++ PA G
Sbjct: 253 INPRLVRGLDYYNRTVFEWVTSS--------LGSQGTVLAGGRYDGLVGQLGGKSTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ R+++ L++LE   +       V +           +     Q LR +   ++  
Sbjct: 305 FAMGLERIVLLLQTLELDKDIKPA---VDVYVTAMGDSCRVEAIKVAQDLRASLPNLKV- 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q+K AD+    +A++ G  E +   + +K L                  
Sbjct: 361 MSHCGGGNFKKQMKRADKSGAAVALVIGEDELANNQVAVKYLR----------------- 403

Query: 469 ARVAQITIPISELVSTVKKI 488
              AQ  +    L + + ++
Sbjct: 404 EDKAQELVARDALATYIAEL 423


>gi|325290214|ref|YP_004266395.1| histidyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965615|gb|ADY56394.1| histidyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 422

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 106/472 (22%), Positives = 191/472 (40%), Gaps = 58/472 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D     I   + +   IR I E YGF  I TP+ E ++   + + +  D 
Sbjct: 1   MKIQRPKGTQDIIPGIIEKWHVLEGQIRKICEEYGFQEIRTPIFEATELFQRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
            NK +++ QD   + ++LR + TA + R   EN    +  P + Y  GP+FR E    GR
Sbjct: 61  VNKEMYTFQDKGNRSMTLRPEGTAAVCRAFVENKLYALPQPVKLYYRGPMFRYENTQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
           FRQF Q   +  G      DAE+  ++ +    +G+K    + +       R      L+
Sbjct: 121 FRQFSQFGAEVFGGEDPLVDAEVIQLVWELFNRLGLKDLVIQINSVGCPVCRAEHKSKLQ 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  ++L          D   +F    +++L  + ++ +  +  KGA         +
Sbjct: 181 AFLEPKKEEL--------CADCQSRFDRNPLRIL--DCKSKHCKELIKGA-------PTI 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L  D      +L E ++                              + + +VRGL+
Sbjct: 224 LEMLCADCRDHFTKLQEYLEA-----------------------VGIAYVVDAGMVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY    +E ++               ++ GGGRYDGLV    G + P  GF++GI R+I 
Sbjct: 261 YYRKTAFEVLVRE--------IGAQSAICGGGRYDGLVEEIGGPSTPGIGFAMGIERVIS 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+S +      +      +T +     +  +      +LR  GI++ + +   +N  +Q
Sbjct: 313 ALESQKIDIAAEQAES---VTIIALGEAARLESFKLVSVLRKRGIKSFLDV-LGRNMKSQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +K ADR    +A+I G  E +R    ++D+  G +    +       E    
Sbjct: 369 MKAADRAGSKIAVIIGEDELARKTAVLRDMKTGGQAEIPLDLLAEKIEELFK 420


>gi|212224873|ref|YP_002308109.1| histidyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212009830|gb|ACJ17212.1| histidyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 437

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 122/464 (26%), Positives = 208/464 (44%), Gaps = 34/464 (7%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            +R E  +G  D   +E+  R  + + IR+++E Y F  I TP  EY+        +E  
Sbjct: 2   NVRLEKVKGTRDLLPEEMAKRRWVFERIRDVFERYNFHEILTPTFEYTALFQLRSGEE-- 59

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             + +++ +D  G+ +SLR D+T+ +AR     F     P + Y I  +FR E+   GR+
Sbjct: 60  VVEQLYAFEDKGGRNLSLRPDMTSSVARLFVNQFQNAPKPVKWYYIANMFRYEEPQSGRY 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F Q  V+ +GS    ADAE+  ++ ++  A G+K  ++ + I +R +LD   + +G+ 
Sbjct: 120 REFWQAGVELIGSDKVEADAEVIALLVESYLATGLK--EFTVNIGDRVLLDEFAKMLGVS 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D      + ++R IDK DK   +     L E              L+ E I  +++ + 
Sbjct: 178 DD------IGLMRLIDKKDKMSREDFIGSLKEF------------GLSDEGIGKVLALIE 219

Query: 246 IDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           I  +   +    E +  +    +    L  + EL++  G   + I I   I RG +YYT 
Sbjct: 220 IKGKPDDVLPKAEELFTSEKAREEIKRLYELVELLKAYGVY-DFILIDLGIARGFDYYTS 278

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+EAI    +                 RYD L+  F G+  PATGF+IGI RLI  L+ 
Sbjct: 279 VVFEAIAPNDLGIGSIGGGG--------RYDNLIEVFGGKPTPATGFAIGIERLIPILEW 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        V +  +  + +  +K     Q LR  GI A+  L   +     L YA
Sbjct: 331 RGLIPEPKLRPD-VYVIPIGKELELRAKAIEIAQSLRKKGITADYDL-MGRKLKKALDYA 388

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            R   P  I+ G  + + G + I+D+  G++++ +I+       
Sbjct: 389 GRLGVPYVILVGKKDLAEGKVTIRDMESGEQIAVKIERVSEELS 432


>gi|220929366|ref|YP_002506275.1| histidyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999694|gb|ACL76295.1| histidyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 442

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 137/475 (28%), Positives = 222/475 (46%), Gaps = 37/475 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKF 59
           M K+  +   +  GF +    +  + N +LD I+  YE YGF PI+TP++E S+  L K 
Sbjct: 1   MAKEV-ITPSILPGFMELLPADQIVFNNMLDIIKKTYEKYGFIPIDTPMIEKSEVLLAKS 59

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             +     K V+         +SLR+DLT PLARYV+++F  + FP + Y IG VFR EK
Sbjct: 60  GGET---EKQVYRFN-KGDNDLSLRFDLTVPLARYVSQHFGDLTFPFKRYHIGKVFRGEK 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GRFR+F QCD+D +G+   +   +  ++         +  +D+ I INNRK+L+G  
Sbjct: 116 PQKGRFREFYQCDIDIIGNENLSLINDAEILSVIYSTFKALGFDDFTIRINNRKVLNGFF 175

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E + +    ++      LR IDKL+K G + V + L                L+ E    
Sbjct: 176 EDLQVPDKTEV------LRTIDKLEKIGSKEVLIELK------------SIGLSEENAQR 217

Query: 240 MVSFLSID--LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
           ++ F+         +  L E+        +G NE+ ++ + +      S+   I  TI R
Sbjct: 218 VLDFVGTKGSCRDIIMHLKEMKVQNEMFNEGINEMELVVDYIDSFKVPSSNYMIDLTIAR 277

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYTG +YE +L              GSV  GGRYD L  ++  + +P  G SIG SR
Sbjct: 278 GLDYYTGTIYETVLNQY--------PSIGSVCSGGRYDNLAQKYTTKKLPGVGISIGFSR 329

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L   L+        +K   P  I  +  +  ++         +R  G+ AE++    K  
Sbjct: 330 LFYQLREAGI-LGEMKRATPSKILVIPMNG-TMGNALEIATKIRDEGVSAEIYFNEGK-I 386

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           G +  YAD+   P  I+ G  E + G+ ++KD+A G++    ++      + +  
Sbjct: 387 GKKFSYADKLGIPYVIVVGEDEVNSGIYKLKDMATGEQTDLTVEQIIEKLKVQDN 441


>gi|171463403|ref|YP_001797516.1| histidyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192941|gb|ACB43902.1| histidyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 442

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 108/466 (23%), Positives = 199/466 (42%), Gaps = 61/466 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    RG  D    +      +   +R++   YG++ + TP++E +    + + +  D  
Sbjct: 15  KINGVRGMNDLLPADAAQWAHLEHVLRDLTRAYGYEFLRTPIVEATAVFQRGIGEVTDIV 74

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S +D  +G+ ++LR + TA L R V EN      P R +  GP+FR+E+   GR+
Sbjct: 75  EKEMYSFEDRLNGKQLALRPEGTAALVRSVIENNLLYEGPKRLWYTGPMFRHERPQRGRY 134

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEK 181
           RQF Q  ++ +G +    DAE+ +M     + +G+K      +       R      L  
Sbjct: 135 RQFHQFGIEALGFAGPDIDAEIILMGQRLWDELGLKGVRLEINSLGQAPERAEHRAALVI 194

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        D   +     +++L  +          +GA         ++
Sbjct: 195 YFEKHQDQLDE--------DSKRRLLSNPLRILDSK--NPEMQALIEGA-------PKLL 237

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  +  K  + +  L+K                         +   KI+  +VRGL+Y
Sbjct: 238 DYLGEESLKHFNAVQALLKAN-----------------------NIPCKINPRLVRGLDY 274

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +          +    G++ GGGRYD L+ R  G+  PA G+++G+ R++  
Sbjct: 275 YNLTVFEWVT--------DELGAQGTIAGGGRYDPLIERMGGKAAPACGWAMGMERVLEL 326

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNFG 418
           +K   S      +     I  +    ++L+   +  + LR+AGI   +F    G S +F 
Sbjct: 327 MKVSGSLPETRAQCD---IFVLHQGGETLTAAMIIAERLRSAGIDTILFCPPDGQSASFK 383

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNN 463
           +Q+K AD      A+I G  E ++   Q+KDL   G++ S  + + 
Sbjct: 384 SQMKKADSSGAAFAVIIGPDELAKNEAQLKDLRGTGEQKSVPLDDV 429


>gi|227328675|ref|ZP_03832699.1| histidyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 424

 Score =  262 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 101/473 (21%), Positives = 188/473 (39%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI +S++ +   YG++ I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPAETALWQRIENSLKQVLSGYGYNEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGDSLTLRPEGTAGCVRAGIEHGILYNQEQRLWYVGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ +M A     +GI  +     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELILMTARWWRVLGIADHVKLELNSIGSLDARAR 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D+L+E        D L +     +++L  +              +  
Sbjct: 177 YREALVAFLEQHKDQLDE--------DCLRRMYTNPLRVLDTKN---------PQIQVLL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               ++  +L  +       L EL+  +                            ++  
Sbjct: 220 NDAPVLTDYLDDESRAHFEALGELLTQS-----------------------GIPYTVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDG+V +  G   PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTTS--------LGAQGTVCAGGRYDGMVEQLGGHATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++S+     + K    V +  +   + +        + LR A   ++     G
Sbjct: 309 LERLVLLVQSVN---PDFKAQPNVDVYLISSGTGTQVAAMQLAEKLRDALPQLKLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q   AD+    +A++ G  E + G + +K+L+ G++ +    +  S
Sbjct: 366 GG-NFKKQFARADKWGARVALVLGENEVAAGQVVVKNLSNGEQDTLAQADVAS 417


>gi|312884305|ref|ZP_07744014.1| histidyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368078|gb|EFP95621.1| histidyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 422

 Score =  262 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 113/494 (22%), Positives = 201/494 (40%), Gaps = 84/494 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  + +++ ++++N+   YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWHKLENAVKNVVSVYGYSEVRMPIVEMTQLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G +    DAE+ MM A     +G                   +
Sbjct: 117 PQKGRYRQFTQCGVEVFGLNGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSLQARAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L G LE+     D+            D   +     +++L  +     +       
Sbjct: 177 YREALVGFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKNAEIQA------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+                               
Sbjct: 218 --ILGDAPKLSDYLDEESKQHFQGLCELLDS-----------------------VGIEYS 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E I         +     G++ GGGRYDGLV +  G++ PA G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWIT--------ESLGAQGTICGGGRYDGLVEQLGGKSTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE  +        V +  +     +L       + LR    G+R  
Sbjct: 305 FAMGLERLVLMLETLELDSVRR----GVDVYVVTAGEGTLLAGMKLAEALREEVPGLRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q K AD+    +A++ G  E S G + +KDL  G + +           
Sbjct: 360 MSHFGGGNFKKQFKRADKVGAAVALVLGEDEVSEGTVVLKDLIGGTQNTYP--------- 410

Query: 469 ARVAQITIPISELV 482
              AQI   ++ELV
Sbjct: 411 --QAQIVTKLAELV 422


>gi|150390122|ref|YP_001320171.1| histidyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949984|gb|ABR48512.1| histidyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 419

 Score =  262 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 94/467 (20%), Positives = 190/467 (40%), Gaps = 52/467 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    E    + +    +++ E +GF  I TP+ E+++   + + +  D 
Sbjct: 1   MLTKVPRGTKDVLPSESYKWHYVEKIAKDVAECFGFQEIRTPVFEHTELFERGIGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + ++L+ + TAP+ R   EN       P + Y I PVFR E+   GR
Sbjct: 61  VEKEMYTFEDRGKRSVTLKPEGTAPVVRSFIENKLYADAQPTKLYYITPVFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIG 183
           +RQ  Q  ++  G+S  + DAE+  +     + +G+++ +  I  I   +  +   E + 
Sbjct: 121 YRQHHQFGIEVFGASNASIDAEVIHVAMTIYQKLGLEKLEVRINSIGCPQCKEHYNEVLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  ++++             ++    ++++  + + ++  +      L  + I      
Sbjct: 181 TYLSNRIDNLCGTC-----QSRYERNPMRII--DCKVESCQEQLTDVPLMIDYI------ 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                                 ++  +    +   +   G       I   IVRGL+YY+
Sbjct: 228 ---------------------CDECRDHFEGVQNHLEAIGVP---FTIDPKIVRGLDYYS 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E I          +    G++ GGGRYD LV +  G   P  GF +G+ R I+AL+
Sbjct: 264 KTAFEIIT--------DEAGKKGTLCGGGRYDQLVEQCGGPATPGVGFGMGLERAILALE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +        + +    I  +     +  +       LR  G+RA+     S++   Q KY
Sbjct: 316 TQGIVIPKPEGLD---IFLVTMGEKAELQGFKILSELRQMGLRADQDH-LSRSTKAQFKY 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           A++       I G  E  RG + +K++  G++    I         +
Sbjct: 372 ANKLMAQYTAIIGDEELERGTVSLKNMETGEQSEISIDKIVDILRDK 418


>gi|194017166|ref|ZP_03055778.1| histidyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194011034|gb|EDW20604.1| histidyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 424

 Score =  262 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 94/460 (20%), Positives = 168/460 (36%), Gaps = 49/460 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E      +    R+    + +  I TP+ E+++   + + +  D 
Sbjct: 1   MSFNIPRGTQDILPGESERWQYVEQIARDTCAAFQYKEIRTPIFEHTELFARGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ I+LR + TA   R   EN        P + Y IGP+FR E+   G
Sbjct: 61  VQKEMYTFEDKKGRSITLRPEGTASTVRSYVENKLFAQPAQPTKLYYIGPMFRYERPQTG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF Q  ++ +GS     DAE+  +     E  G+      I     K       K  
Sbjct: 121 RYRQFYQFGIEAIGSKDPAIDAEVISLAMSVYEKAGLSNLKLVINSLGDKESRADYRKAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +    +  E  I     D   +     +++L  +   D+    T            +  +
Sbjct: 181 V----EHFEPRIDEFCHDCQTRLHQNPLRILDCKKDRDHELMAT---------APSIQDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ +      ++ + +                               +   +VRGL+YY 
Sbjct: 228 LNDESRTYFEKVKQYLTDI-----------------------GVEYVVDPNLVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                ++ GGGRYDGLV    G   P  GF++ I R + A+ 
Sbjct: 265 HTAFEIMSNAEGF------GAITTLAGGGRYDGLVEGIGGPESPGIGFAMSIERFLSAID 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +             + +       D+          LR  GI +EM   + K    Q K 
Sbjct: 319 AEGIDLPL---QDGIDLYIAALGDDAKDYAVSLLNRLRKEGISSEMDY-TGKKLKGQFKA 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           ADR       + G  E ++ ++ +KD   G+++  ++   
Sbjct: 375 ADRLKAKFIAVLGEDELAQHIVNVKDTTTGEQIEVKLDEL 414


>gi|258627190|ref|ZP_05721978.1| histidyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|262165072|ref|ZP_06032809.1| histidyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|258580492|gb|EEW05453.1| histidyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|262024788|gb|EEY43456.1| histidyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 422

 Score =  262 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 185/476 (38%), Gaps = 73/476 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++   ++N+   YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGIDGPDVDAELIMMTARLWRELGISEHVRLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRSALIEYLEQYQSVLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+                               
Sbjct: 216 QAILGDAPQLSDYLDAESKQHFAGLCELLDAA-----------------------GIEYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWIT--------ESLGSQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++L ++         V +  +     ++       + LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLGNTEVRRS----VDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              G   NF  Q K AD+    +A++ G  E +   + +KDLA G + +       
Sbjct: 361 THFGGG-NFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGDQSTVAQAEVA 415


>gi|254225023|ref|ZP_04918637.1| histidyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125622410|gb|EAZ50730.1| histidyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 422

 Score =  262 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 186/476 (39%), Gaps = 73/476 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++   ++N+   YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALIDYLEQYQNVLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+                               
Sbjct: 216 QAILGDAPQLSDYLDAESKQHFAGLCELLDAA-----------------------GIEYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWIT--------ESLGSQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++L ++         V +  +     ++       + LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLGNTDVRRS----VDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              G   NF  Q K AD+    +A++ G  E +   + +KDLA G++ +       
Sbjct: 361 THFGGG-NFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGEQNTVVQAEVA 415


>gi|284048847|ref|YP_003399186.1| histidyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953068|gb|ADB47871.1| histidyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 417

 Score =  262 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 107/466 (22%), Positives = 189/466 (40%), Gaps = 58/466 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D     I         IR +   + +  I TP+ E+++   + + D  D 
Sbjct: 1   MLTGVPRGTKDILPGTINGWRYAEQIIREVCREFNYQEIRTPIFEHTELFQRGIGDGTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
            +K +++  D  G+ ++LR + TA + R   EN       P + + IGP+FR ++   GR
Sbjct: 61  VDKEMYTFTDRSGRSLTLRPENTASVVRSFVENKLYAEPMPLKVFYIGPMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQF Q  V+ +G+ +   DAE+ ++    L+  G+K    + +     N R     +L+
Sbjct: 121 MRQFHQFGVEALGAESPVVDAEVILLALTVLKRFGLKDLKLKINSVGCPNCRPQHRKLLQ 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  D+L          D   +F    +++L  + + D    F  GA         +
Sbjct: 181 DYFRPHLDEL--------CEDCQSRFDRSPLRIL--DCKVDADKPFMAGA-------PKI 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L  +       + +L+       +  + L                       VRGL+
Sbjct: 224 TDHLCDECRAHFETVKKLLDEAGVEYEVDSNL-----------------------VRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E                  +VGGGGRYDGLV    G + P  GF+IG+ R+++
Sbjct: 261 YYTKTAFEIQYA--------PLGAQSAVGGGGRYDGLVEELGGPSTPGVGFAIGLERILL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           A++         +    V I  +  D   ++        LR  G+  +M L   ++   Q
Sbjct: 313 AMEKQNLLPTGKEA---VDIFAVIPDEGGVTDAFRVITNLRNKGLVCDMNLVE-RSMKAQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +K A+R     A+I G  ERSRG + ++++A   +        E++
Sbjct: 369 MKQANREQARFALIFGEEERSRGAVTVRNMADSSQEEVCFGALEAY 414


>gi|157961134|ref|YP_001501168.1| histidyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189082311|sp|A8H246|SYH_SHEPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|157846134|gb|ABV86633.1| histidyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 424

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 106/500 (21%), Positives = 190/500 (38%), Gaps = 87/500 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R+   +YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKLETVLRDTVGSYGYSEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ M+ A   E +GI            D      
Sbjct: 117 PQKGRYRQFHQFGVEVYGIPTADIDAEVLMLSAKLWEKLGITEHVTLELNTLGDTEERAA 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALIAFLEQHKEVLDE------------DSQRRMYSNPLRVLDSKN---------ADV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   +++ +   D       L EL++                           +  
Sbjct: 216 QALLADAPVLMDYFGEDTRSHFSHLCELLEA-----------------------VGIQYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 253 INPRLVRGLDYYNRTVFEWVTSS--------LGSQGTVLAGGRYDGLVGQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EM 409
           F++G+ R+++ L++LE   +       V +       +   +     Q LR +   A  M
Sbjct: 305 FAMGLERIVLLLQTLELDKDIGPA---VDVYVTAMGDNCKVEAIKIAQELRASLPTAKVM 361

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                 NF  Q+K AD+    +A++ G  E +   + +K L                   
Sbjct: 362 SHCGGGNFKKQMKRADKSGACVALVIGEDELANNQVAVKHLR-----------------E 404

Query: 470 RVAQITIPISELVSTVKKIL 489
             AQ  +    L + + +++
Sbjct: 405 DKAQELVARDALATYIAELI 424


>gi|304382464|ref|ZP_07364962.1| histidine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336417|gb|EFM02655.1| histidine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 452

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 145/490 (29%), Positives = 215/490 (43%), Gaps = 60/490 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKF 59
           M K       +P+G  D   +E+  RN I D+IR++Y  YGF  IETP +E   +L GK+
Sbjct: 1   MNK-----PSIPKGTRDFSPEEMAKRNYIFDTIRDVYALYGFQQIETPAMETLQTLMGKY 55

Query: 60  LPDED-----RPNKGVFSLQDDDGQWI--------------SLRYDLTAPLARYVAENFD 100
             + D       N G +  +  D + +               LRYDLT P ARYV  + +
Sbjct: 56  GEEGDKLLFKILNSGDYLSKVSDDELLQRHALPLAAKLCEKGLRYDLTVPFARYVVMHRE 115

Query: 101 TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
            +  P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E   ++       G+
Sbjct: 116 ELQLPFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVEFMQIIDTVFSRFGV 175

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
                 I INNRKIL GI E IG          + +  AIDKLDK GL  V   L     
Sbjct: 176 ---RVQIKINNRKILSGIAETIGAGDK-----IIDITVAIDKLDKIGLDNVNEEL----- 222

Query: 221 DNSGDFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
                  + A L  E I  +     LS   ++ +  + +L+K +  G+KG  E   I   
Sbjct: 223 -------RNAGLNDETIARLQPIITLSGTNDEKLSVIADLLKDSETGQKGVEETRFILHT 275

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
           +   G   N ++   T+ RGL YYTG ++E          K   V  GS+ GGGRYD L 
Sbjct: 276 LADCG-LKNELQFDLTLARGLNYYTGAIFEV---------KALDVEIGSITGGGRYDNLT 325

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
             F  Q +   G S G  R+   L +L+    N      VL           +       
Sbjct: 326 GIFGIQGLSGVGISFGADRIFDVLNALDLYPKNAINATKVLFINFGETET--AYCLPVLS 383

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            LR+ GIRAE++   +K    Q+ YA+ ++ P   + G  E +   + +K++  G +   
Sbjct: 384 ELRSNGIRAEIYPDKAK-MKKQMTYANAKHIPFVALAGDNEIAENKITVKNMETGTQQLV 442

Query: 459 EIKNNESWRE 468
             K   +   
Sbjct: 443 SAKELITLLS 452


>gi|260598900|ref|YP_003211471.1| histidyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260218077|emb|CBA32825.1| Histidyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 424

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 105/501 (20%), Positives = 185/501 (36%), Gaps = 90/501 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGDTAIWQRIEGTLKQVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ M+ A    A+G                   N
Sbjct: 117 PQKGRYRQFHQLGVEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHVDKLDE------------DCKRRMYSNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   ++  +L  +  +    L   +            L                  
Sbjct: 216 QALLNDAPMLGDYLDEESREHFAGLCAFLDDAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTTS--------LGSQGTVCAGGRYDGLVEQLGGRAAPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V I  +   + + S      + +R A  G +  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFTADPVVDIYLIASGNGTQSAAMQLAERVRDALPGCKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E +   + +KDL  G++ +           
Sbjct: 362 TNYGGG-NFKKQFARADKWGARIALVLGEDEVANRQVVVKDLRSGEQQAL---------- 410

Query: 469 ARVAQITIPISELVSTVKKIL 489
                     SEL + ++ +L
Sbjct: 411 --------AQSELAAHLQTLL 423


>gi|322831767|ref|YP_004211794.1| histidyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321166968|gb|ADW72667.1| histidyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 424

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 101/473 (21%), Positives = 186/473 (39%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +  RI  S++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPEDTALWQRIEGSLKQVLGSYGYSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G      DAE+ ++ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFNQLGVEVFGLQGPDVDAELILLTARWWRALGISEHVALELNSIGSLEARAD 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +                 
Sbjct: 177 YRDALVAFLEQHKDKLDE--------DCKRRMYSNPLRVLDSKN---------PDIQTLL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L EL++ +                            ++  
Sbjct: 220 NDAPELGDYLDEESREHFAGLCELLEQS-----------------------GIPYTVNQR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  P  GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTSS--------LGSQGTVCAGGRYDGLVEQLGGRATPGVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++     + K    V    +   + + S      + LR A   ++     G
Sbjct: 309 LERLVLLVQAVN---PDFKAPATVDTYVISSGAGTQSVAMQLAETLRDALPELKVMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q   AD+    +A++ G  E +   + +KDL  G + +       +
Sbjct: 366 GG-NFKKQFARADKWGARVALVLGETEVANQQVVVKDLQSGTQETLAQSEIVA 417


>gi|296133427|ref|YP_003640674.1| histidyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032005|gb|ADG82773.1| histidyl-tRNA synthetase [Thermincola potens JR]
          Length = 419

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 105/480 (21%), Positives = 191/480 (39%), Gaps = 70/480 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  D    ++   + +   I+ I   YG+  I TP+ E+++   + + D  D   K +
Sbjct: 6   PKGTNDILPGQVEKWHFLEKIIKEICREYGYAEIRTPIFEHTELFLRGVGDTTDVVEKEM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++ QD   + ++LR ++TA   R   E+       P + Y  GP+FR      GR+RQF 
Sbjct: 66  YTFQDKGKRSLTLRPEMTASAVRAFVEHKLYAQPLPIKVYYEGPMFRYANVQAGRYRQFH 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLHGDD 188
           Q  V+  GS     DAE+  M  D    +G++  + HI             E++      
Sbjct: 126 QFGVEVFGSDDPVVDAEVISMAMDFYNRLGLRDLELHINSVGCPVCRPKHREELRKFLAG 185

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           KL+    + R+     ++    +++L  +          +   L SE     +S L  D 
Sbjct: 186 KLDRLCALCRS-----RYDRNPMRILDCKE---------EACRLVSEGAPTTLSCLCDDC 231

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +   ++   +          + L                       VRGL+YYT   +E
Sbjct: 232 REHFEKVKNYLDAIGIEYIIDDRL-----------------------VRGLDYYTKTAFE 268

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            +                S+GGGGRY+GL+ +  G   P  GF++G+ R++  ++     
Sbjct: 269 IMAAD--------IGAQSSIGGGGRYNGLIEQVGGPPTPGIGFALGLERILATMERQGIE 320

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                      I       ++  K      +LR +G+ AE+    +++   Q+K+A+R  
Sbjct: 321 IPVENRCD---IYLAPLGEEAKLKSFRILDILRRSGLAAEID-NLNRSLKAQMKFANRLK 376

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
               +I G  E +RG+  ++++A G                   Q  I + EL++ +KKI
Sbjct: 377 AKYVVILGENELNRGIAAVRNMADG------------------QQEEIALDELINYLKKI 418


>gi|296104193|ref|YP_003614339.1| histidyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295058652|gb|ADF63390.1| histidyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 424

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 106/497 (21%), Positives = 192/497 (38%), Gaps = 82/497 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKQVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G      DAE+ M+ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFNQLGVEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +                 
Sbjct: 177 YRDALVAFLEEHKEKLDE--------DCKRRMYSNPLRVLDSKN---------PDVQALL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L++           L                      
Sbjct: 220 NDAPALGDYLDDESREHFAGLCKLLEAAGIAYTVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTTS--------LGSQGTVCAGGRYDGLVEQLGGRAAPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    V I  +   +++ S      + +R A   ++     G
Sbjct: 309 LERLVLLVQAVN---PEFKADSVVDIYLVASGAETQSAAMQLAERVRDALPEVKLMTNHG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              NF  Q   AD+    +A++ G  E + G + +KDL  G++                 
Sbjct: 366 GG-NFKKQFARADKWGASIALVLGESEVANGEVVVKDLRSGEQT---------------- 408

Query: 473 QITIPISELVSTVKKIL 489
             T+    + + ++ +L
Sbjct: 409 --TVTQDGVAAHLRTLL 423


>gi|313156965|gb|EFR56397.1| histidine--tRNA ligase [Alistipes sp. HGB5]
          Length = 451

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 141/479 (29%), Positives = 229/479 (47%), Gaps = 49/479 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDED-- 64
           +  +P+G  D    E+  R  I D+++ ++  YGF P+ETP +E     LGK+  + D  
Sbjct: 5   KPSIPKGTRDFSPAEMMRRQYIFDTVKGVFRTYGFAPLETPSMENLSTLLGKYGEEGDKL 64

Query: 65  ---RPNKGVFS--LQDDDGQ------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
                N G ++  L DD+ +         LRYDLT P ARYV ++   + FP + Y++ P
Sbjct: 65  LFKILNSGDYAAGLSDDEVRQASRICEKGLRYDLTVPFARYVVQHQGELTFPFKRYQVQP 124

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GR+R+F QCDVD +G+ +   + E+  ++     A+GI+     + +NNRK
Sbjct: 125 VWRADRPQKGRYREFYQCDVDVIGTRSLLCEVELIEIVERVFRALGIRVA---LKMNNRK 181

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL GI E IG       ++ + +  AIDKL+K GL  VK  L E              L 
Sbjct: 182 ILFGIAEAIG-----HADKMMDITVAIDKLEKIGLDNVKAELLER------------GLG 224

Query: 234 SEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E +D +     LS D  + + +L E++  +  G KG  E+  +   V++SG     +++
Sbjct: 225 QEAVDKLQPILELSDDNSQKLTKLREVLAVSETGLKGIEEMETVFGYVQRSGIGL-TVEL 283

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             ++ RGL YYTG ++E          K      GS+ GGGRYD L   F   N+   G 
Sbjct: 284 DLSLARGLNYYTGAIFEV---------KALDFAIGSICGGGRYDDLTGIFGMPNMSGVGI 334

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           S G  R+   +  L      +     V  T +  + +  +      + LR AG+ AE++ 
Sbjct: 335 SFGADRIYDVMTGLNLFPEEVSFTTRVFFTNLGAEEE--AASLQLLRSLRDAGVAAEIYP 392

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              K    Q++YA+RR+ P  +I G+ E       +KD+  G++         +  E+R
Sbjct: 393 ECGK-MKKQMEYANRRSIPYVVIIGSQELEAQAATVKDMRSGEQRQVPFAALAADLESR 450


>gi|258619958|ref|ZP_05714998.1| histidyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262172169|ref|ZP_06039847.1| histidyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258587691|gb|EEW12400.1| histidyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261893245|gb|EEY39231.1| histidyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 422

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 185/476 (38%), Gaps = 73/476 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++   ++N+   YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGISEHVRLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRSALIEYLEQYQSVLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+                               
Sbjct: 216 QAILGDAPQLSDYLDAESKQHFAGLCELLDAA-----------------------GIEYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWIT--------ESLGSQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++L ++         V +  +     ++       + LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLGNTDVRRS----VDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              G   NF  Q K AD+    +A++ G  E +   + +KDLA G + +       
Sbjct: 361 THFGGG-NFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGDQSTVAQAEVA 415


>gi|292669403|ref|ZP_06602829.1| histidine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648964|gb|EFF66936.1| histidine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 421

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 94/460 (20%), Positives = 179/460 (38%), Gaps = 52/460 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D     +     + + IR++   YG+  I TP+ E+++   + + D  D 
Sbjct: 1   MLTNAPRGTKDILPDAVGAWTYVENVIRDLCARYGYHEIRTPIFEHTELFQRGIGDGTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGR 124
            +K +++  D   + ++LR + TA   R   +N         + + IG +FR ++   GR
Sbjct: 61  VDKEMYTFTDRGDRSLTLRPENTASAVRAYLQNKLYADGGLQKLFYIGSMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIG 183
            R+F Q  V+ +G +   ADAE  ++  D L A+G+      +             E++ 
Sbjct: 121 MREFHQFGVEAIGEAGPAADAETILLAFDVLTALGLTGLTLKLNSVGCPNCRPVYRERLQ 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  + L+E        D  +++    +++L  + + D    F  GA         +   
Sbjct: 181 EYFKEYLHEL-----CDDCQERYTRSPLRIL--DCKKDAERSFMAGA-------PAITDC 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +      ++ + +                               +   +VRGL+YYT
Sbjct: 227 LCAECADHFGQVKDYLTSA-----------------------GISYTLDPRLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E                  +V GGGRYDGLV    G   PA GF+ G+ R+++AL+
Sbjct: 264 RTAFEIAYP--------PLGAQSAVAGGGRYDGLVEELGGTPTPAVGFAAGLERVLLALE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +  +     +          LR  G+RA M  G  ++   Q+K 
Sbjct: 316 QQNLVPEQPPAAD---VFLITLGDAASRAAFPLLHELRCGGVRALMDYG-GRSMKAQMKQ 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           A++     A+I G  E ++    ++D+ +  + S  + + 
Sbjct: 372 ANKSGARYAVILGEDELTQHAALVRDMMESTQESYSLDDI 411


>gi|330446670|ref|ZP_08310322.1| histidyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490861|dbj|GAA04819.1| histidyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 422

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 109/481 (22%), Positives = 192/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   +  +  ++  +++ +   YG++ I  P++E +    + +
Sbjct: 1   MAKQ----IQAIRGMNDCLPTQSPLWQKVEGTVKQVISAYGYNEIRMPIVESTHLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   +N        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIQNGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK---------RNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ MM A     +GI                   
Sbjct: 117 PQKGRYRQFHQVGVEVFGLNGPDIDAELIMMTARLWRELGIHEHVRLELNSIGSLEARAE 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            RK L   LE+     D+            D   +     +++L  +       +    A
Sbjct: 177 YRKALIAFLEQHLDVLDE------------DAKRRMYTNPLRVLDTKNAA--IQEILVDA 222

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+       +    L                  
Sbjct: 223 -------PKLSEYLDPESKEHFDGLCELLDAAGIKYQVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  P+ G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPSVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAE 408
           F++G+ RL++ +++LE           V +  +     +L+      + LRT  +G+R  
Sbjct: 305 FAMGLERLVLLMEALEQDEVRRS----VDVYVVTAGEGTLAAGMTLAEKLRTEVSGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q K AD     +A++ G  E +   + +KDL  G++ +       +   
Sbjct: 361 THFGGG-NFKKQFKRADNVGAAVALVLGENEIAENTVVVKDLHGGEQTTMAQDEVAAKLA 419

Query: 469 A 469
           A
Sbjct: 420 A 420


>gi|260063153|ref|YP_003196233.1| histidyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|257796362|gb|EAR14033.2| histidyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 460

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 146/487 (29%), Positives = 226/487 (46%), Gaps = 52/487 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+  RN I+ +IR  +E +GF PIETP  E  D+L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPQEVARRNHIIGAIREQFERFGFQPIETPSFENYDTLMGKYGEEGDRL 63

Query: 65  ---RPNKGVF-------SLQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCR 107
                N G F        LQD D   ++       LRYDLT P ARYV  + + I FP +
Sbjct: 64  IFKILNSGDFLKKADATVLQDKDSAGLTPQIAEKALRYDLTVPFARYVVMHQNEIDFPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GRFR+F QCD D VG++    +AE   +      ++G+      I
Sbjct: 124 RYQIQPVWRADRPQRGRFREFYQCDADVVGATGLIQEAEFIQLYDRVFASLGLNG--VTI 181

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +N+RK+L GI E IG               A+DKLDK G + V+  + E          
Sbjct: 182 KLNHRKVLSGIAEVIGAAD-----RLTDFTVALDKLDKIGREKVEAEMEEK--------- 227

Query: 228 KGANLTSEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++ E I        +  E S  +  L  L+  +  G +G  EL  + +L R+ G  
Sbjct: 228 ---GISREAIRKAAPLFDLSGEASGQLAALRGLLAKSPTGLQGVEELEELLDLTRQMGLE 284

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           + +  +  T+ RGL YYTG ++E            + V  GS+GGGGRYD L   F  ++
Sbjct: 285 AGKCVLDVTLARGLNYYTGTIFEV--------AAPETVQMGSIGGGGRYDDLTGIFGLRD 336

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           V   G S G+ R+ + ++ L      +     V       +             LR+ GI
Sbjct: 337 VSGVGISFGLDRICLVMEELGLFPETLDRALDVFCINFGPEEAR--SALRLVMRLRSRGI 394

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           RA+++   +K  G Q KYAD+R+ P  ++ G  E  +G   ++D+  G + S  +   E 
Sbjct: 395 RADLYPNDAK-VGKQFKYADKRDVPFVVLIGDEELRKGEFTVRDMRGGGQQSYPLDAWED 453

Query: 466 WREARVA 472
           + +   A
Sbjct: 454 FADTLSA 460


>gi|261820574|ref|YP_003258680.1| histidyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261604587|gb|ACX87073.1| histidyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 424

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 102/473 (21%), Positives = 189/473 (39%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI +S++ +   YG++ I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPAETALWQRIENSLKQVLSGYGYNEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGILYNQEQRLWYVGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ +M A     +GI  +     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELILMTARWWRVLGIADHVKLELNSIGSLDARAR 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D+L+E        D L +     +++L  +            A +  
Sbjct: 177 YREALVAFLEQHKDQLDE--------DCLRRMYTNPLRVLDTK--NPQIQALLNDAPV-- 224

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L EL+  +                            ++  
Sbjct: 225 -----LTDYLDDESREHFEALGELLTQS-----------------------GIPYTVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDG+V +  G   PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTTS--------LGAQGTVCAGGRYDGMVEQLGGHATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++S+     + K    V    +   + +        + LR A   ++     G
Sbjct: 309 LERLVLLVQSVN---PDFKAQPSVDAYLISSGTGTQVAAMQLAEKLRDALPQLKLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q   AD+    +A++ G  E + G + +K+L+ G++ +    +  S
Sbjct: 366 GG-NFKKQFARADKWGARVALVLGENEVAAGQVVVKNLSNGEQDTLAQADVAS 417


>gi|154686897|ref|YP_001422058.1| histidyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166227943|sp|A7Z751|SYH_BACA2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|154352748|gb|ABS74827.1| HisS [Bacillus amyloliquefaciens FZB42]
          Length = 424

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 97/471 (20%), Positives = 179/471 (38%), Gaps = 51/471 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E      +   +R     Y +  I TP+ E+++   + + +  D 
Sbjct: 1   MAYHIPRGTQDILPGESDRWQFVEQIMRETCRTYQYKEIRTPIFEHTELFARGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV--FPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA   R   EN        P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFEDRKGRSLTLRPEGTAAAVRAFNENKLFANPVQPTKLYYVGPMFRYERPQTG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           RFRQF Q  ++ +GS     DAE+  +        G+K     +    ++       E +
Sbjct: 121 RFRQFYQFGIEAIGSKDPAVDAEVIALAMSIYRKAGLKHVKLVLNSLGDQDSRKSYREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + ++ E        D   +     +++L  + + D   +  K A         ++ 
Sbjct: 181 VKHFEPRIGEF-----CSDCQSRLHTNPLRIL--DCKKDREHELMKTA-------PSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++ + +                              +I   +VRGL+YY
Sbjct: 227 YLNEESAAYFEKVKQYLNDL-----------------------GIPFEIDPNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +                ++ GGGRYDGLV +  G   P  GF++ I RL+ A+
Sbjct: 264 NHTAFEIMSNAEGF------GAITTLAGGGRYDGLVEQIGGPEAPGIGFAMSIERLLAAI 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            + +     +     +    +     +          LR AGI +E+    +K    Q K
Sbjct: 318 DAEK---TELPVNQGIDCYIVTLGEKAKDYSVSLVYKLREAGISSEIDY-ENKKMKGQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ADR       I G  E ++  + +KD   G++    +       +A   Q
Sbjct: 374 TADRLGARFIAILGEDELAQNKINVKDAETGEQREVVLDELIQVLKADQKQ 424


>gi|254173331|ref|ZP_04880004.1| histidyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214032740|gb|EEB73569.1| histidyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 435

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 119/454 (26%), Positives = 206/454 (45%), Gaps = 34/454 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E  +G  D   +E+  R  + + IR ++E Y F  + TP  EY++       +E   
Sbjct: 1   MKVERVKGTRDFLPEEMAKRRWVFERIREVFERYNFHEVLTPTFEYTELFKLRSGEE--V 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D  G+ ISLR D+T+ +AR     F T   P + Y +  +FR E+   GR+R
Sbjct: 59  VKQLYAFLDKGGRDISLRPDMTSSVARLYVSAFQTAPKPIKWYYMANMFRYEEPQSGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +GS    ADAE+  +  ++  A G+   D+ + I +R +LD   + +G+  
Sbjct: 119 EFWQAGVELIGSDRVEADAEVIALFTESYLATGL--EDFTVNIGDRVLLDEFAKMLGVKD 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D      + ++R IDK DK   +     L +              L+ E ++ ++S + I
Sbjct: 177 D------IGLMRLIDKKDKLTKEEFVKALRDF------------GLSDEGVEKVLSLVEI 218

Query: 247 DLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             E   +    E +  +   +     L  + +L+   G +   I+I   I RG +YYT  
Sbjct: 219 KGEPNEVLPKAEELFTSEVAKAEIRRLYELVDLLEAYGVSK-WIRIDLGIARGFDYYTSV 277

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+EAI    +                 RYD L+  F G+  PATGF+IG+ RLI  L+  
Sbjct: 278 VFEAIAPNDLGIGSIGGGG--------RYDNLIEVFGGKPTPATGFAIGVERLIPILEWK 329

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 IK    V +  +  + +           LR AG++A++ L + +     L YA 
Sbjct: 330 GLIP-EIKLRPDVYVIPIGKEVELRKTAVEVVSALRRAGVKADVEL-TGRKLRKALDYAG 387

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           R N P  ++ G  +   G + I+D+  G++   +
Sbjct: 388 RLNVPYVVLIGKRDLENGNVTIRDMETGEQKVVK 421


>gi|261405428|ref|YP_003241669.1| histidyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281891|gb|ACX63862.1| histidyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 417

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/461 (20%), Positives = 176/461 (38%), Gaps = 52/461 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + E P G  D     +     I +  R++   Y +  I TP+ E ++   + + +  D  
Sbjct: 5   KFEKPTGTQDILPGAVEKWQFIEEKARDLCRRYNYREIRTPIFEQTELFERGVGETTDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++ +D   + ++LR + TA + R   +N         + Y +GP+FR E+   GR+
Sbjct: 65  EKEMYTFKDKGDRSMTLRPEGTAGVVRAYVQNKLYGEPDVTKLYYLGPMFRYERPQAGRY 124

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+  G++    DAE+  +     + +G+      I       +        L 
Sbjct: 125 RQFHQFGVEVFGTADPAIDAEVIALGYSFYKELGLNGVKAEINSVGTPEVRAAYRSALLA 184

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             + + + L      D   +     +++L  +      GD              ++  L 
Sbjct: 185 FLEPMKDSL----CSDCQSRMERNPLRVLDCKKDQGKFGD-----------APSILESLD 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                               E+       +   +   G      +I+  +VRGL+YYT  
Sbjct: 230 --------------------EECSTHFEKVQGYLDAMG---IEYEINPRLVRGLDYYTHT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E         + Q      +VGGGGR++GLV +  G + P  GF IG+ R+ + L+  
Sbjct: 267 AFEF--------KAQGIGAIDTVGGGGRFNGLVGQIGGPDQPGIGFGIGLERIQLILEHQ 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             + +  K +    +  +     +  +       LR  G+ AE      +    Q+K AD
Sbjct: 319 GVNLSASKPLD---VYLVALGEAAERELAKLIYELRRNGVSAERDY-LGRKMKAQMKSAD 374

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           R       I G  E +RG + +K +  G++ +  + +    
Sbjct: 375 RLQARYTAILGDDELARGEIALKSMETGEQRTVRLDSLVQE 415


>gi|167772470|ref|ZP_02444523.1| hypothetical protein ANACOL_03848 [Anaerotruncus colihominis DSM
           17241]
 gi|167665573|gb|EDS09703.1| hypothetical protein ANACOL_03848 [Anaerotruncus colihominis DSM
           17241]
          Length = 465

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/458 (19%), Positives = 167/458 (36%), Gaps = 52/458 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
             PRG  D    +      I ++  +    +GF+ I  P  E+++   + + D  D   K
Sbjct: 34  SAPRGTQDVLPSQSARWRYIEETALDTARLFGFEEIRVPTFEHTELFNRSVGDTTDVVQK 93

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            +++  D   + I+LR + TA + R + +N       P +   +   FR EK   GR R+
Sbjct: 94  EMYTFFDKGDRSITLRPEGTAGVMRAILQNGLIGGPLPVKASYVVSCFRYEKPQAGRLRE 153

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG-ILEKIGLHG 186
           F Q  V+  G+++  ADA++  +     +A+G+      I             E +  + 
Sbjct: 154 FHQFGVEMAGAASPAADAQVIALAKAVFDALGVTGLALEINSIGCPECRARYHEALRAYF 213

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +  E     RA        L+   + + + ++        GA         ++ ++  
Sbjct: 214 QARAGELCDTCRAR-------LEKNPMRILDCKSPVCSQIAAGA-------PRVLDYICD 259

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                   L   +                               ++  IVRGL+YYT  V
Sbjct: 260 GCRAHFEGLKTRLDALGIA-----------------------YTVNPAIVRGLDYYTRTV 296

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +               G+V GGGRYDGL+    G   P+ GF++G+ RL++ +    
Sbjct: 297 FEFVATG--------IGAQGTVCGGGRYDGLIEMLGGAPTPSIGFAMGLERLLLVMDQQG 348

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  E     +        +  +       LR  G  AE      ++   Q+KYAD+
Sbjct: 349 ---CAFPEPQWCTMYIGSMGEAASVRAMQLADGLRQEGFWAECD-TVGRSVKAQMKYADK 404

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
                + I G  E + G + +K +  G +    +  + 
Sbjct: 405 LGAKFSCILGDNELAAGKVTVKRMDNGTQTELTLDEDA 442


>gi|77164419|ref|YP_342944.1| histidyl-tRNA synthetase, class IIA [Nitrosococcus oceani ATCC
           19707]
 gi|254433972|ref|ZP_05047480.1| histidyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|76882733|gb|ABA57414.1| histidyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090305|gb|EDZ67576.1| histidyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 423

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 112/492 (22%), Positives = 195/492 (39%), Gaps = 79/492 (16%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    +     R+ + +  +  +YG+  I  PLLE ++   + + +  D  
Sbjct: 3   KIQAIRGMNDLLPNQTPHWQRVEEVLSRVLASYGYQEIRLPLLEPTELFRRSIGEVTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  ++LR + TA   R + ++      P R +  GP+FR+E+   GR+R
Sbjct: 63  EKEMYTFIDRNGDSLTLRPEGTAGCVRSILQHGLLTQGPLRLWYYGPMFRHERPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKI 182
           QF Q  V+ +G+     DAE+ +M A     +G++    + +       R      L   
Sbjct: 123 QFYQIGVEVLGTKGPDVDAELILMTARFWRRLGLQDLRLQLNSLGSPAARIAYRERLVDF 182

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
               +D L+E        D   +     +++L  +                 EQ   ++ 
Sbjct: 183 FTAHEDVLDE--------DSRRRLHSNPLRILDSKN---------PALQEIIEQAPQLLD 225

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  D       L   +       K    L                       VRGL+YY
Sbjct: 226 YLDDDSRTHFEALRHTLDSADIAYKINPRL-----------------------VRGLDYY 262

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  V+E +          +    G+V  GGRYDGLV +  GQ++PA GF++G+ RL+  L
Sbjct: 263 TRTVFEWV--------SDQLGSQGTVCAGGRYDGLVEQLGGQSIPAVGFALGLDRLVALL 314

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA---EMFLGSSKNFGN 419
                    I       +  +     +  +  ++ + LR A I A   ++  G   +F +
Sbjct: 315 GEQGRLKAPIPA----DLYLVAVGPQAERESLLFAERLREA-IPAARLQVNYGGG-SFKS 368

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           QLK ADR     A+I G  E  +G + +KDL +G+                  Q  +   
Sbjct: 369 QLKRADRSGARWALILGEDEIVQGTVSVKDLRQGQ-----------------PQELVSQD 411

Query: 480 ELVSTVKKILQE 491
           +L   +K+ LQ 
Sbjct: 412 KLSDYIKQQLQS 423


>gi|218548049|ref|YP_002381840.1| histidyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226737075|sp|B7LKC4|SYH_ESCF3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|218355590|emb|CAQ88201.1| histidyl tRNA synthetase [Escherichia fergusonii ATCC 35469]
          Length = 429

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 102/481 (21%), Positives = 185/481 (38%), Gaps = 69/481 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG  D    E  +  R+   I+++ E+YG+  I TP+LE +    + +
Sbjct: 1   MSK----KIQSVRGMNDYLPVETAVWQRVERIIKSVVESYGYSEIRTPILEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQ-----WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            +  D   K +++  D +        ++LR + TA   R   E+        R + +GP+
Sbjct: 57  GEVTDVVEKEMYTFNDRERDAKEVVSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPM 116

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGI 169
           FR+E+   GR+RQF Q  ++  G      DAE+ M+ A     +GI  +     +    +
Sbjct: 117 FRHERPQKGRYRQFHQIGLEVFGLQGPDIDAELIMLTARWWRELGISEHVTLELNSIGSL 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R      L        +KL+E        D   +     +++L  +     +      
Sbjct: 177 EARANYRDALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNPEVQA------ 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +  +L  +  +    L +L++           L                 
Sbjct: 223 ---LLNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRL----------------- 262

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                 VRGL+YY   V+E +               G+V  GGRYDGLV +  G+   A 
Sbjct: 263 ------VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATSAV 308

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++G+ RL++ ++++       K    V I  +   +D+        + LR    G++ 
Sbjct: 309 GFAMGLERLVLLVQAVN---PEFKADPVVDIYLVASGADTQPAAMALAERLRDELPGVKL 365

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               G   NF  Q   AD+    +A++ G  E + G   +KDL  G++ +    +  +  
Sbjct: 366 MTNHGGG-NFKKQFGRADKWGARIAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHL 424

Query: 468 E 468
            
Sbjct: 425 R 425


>gi|157374572|ref|YP_001473172.1| histidine--tRNA ligase [Shewanella sediminis HAW-EB3]
 gi|189082312|sp|A8FT71|SYH_SHESH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|157316946|gb|ABV36044.1| Histidine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 424

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 106/492 (21%), Positives = 200/492 (40%), Gaps = 71/492 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R     YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKLETVLRETVSAYGYSEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFDDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G  +   DAE+ M+     E +GI            + +   L
Sbjct: 117 PQKGRYRQFNQFGVEVYGIGSADVDAEVLMLSHRLWEKLGIT-----------EHVTLEL 165

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +G   +       ++       ++   +  + +                         
Sbjct: 166 NTLGDPAERAAYRDALIAYLEQFKEQLDEESQRRMYTNPL-------------------R 206

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++   + D++  + +  EL++    GE+       + EL+   G    +  I+  +VRGL
Sbjct: 207 VLDTKNPDVQALLTDAPELME--YLGEETRAHFSHLCELLDAVG---IKYVINPRLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V  GGRYDGLV +  G+N PA GF++G+ R++
Sbjct: 262 DYYNRTVFEWVTSS--------LGAQGTVLAGGRYDGLVEQLGGKNTPAVGFAMGLERIV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + L++LE + +       V +        S  +     Q LR+    +R  M      NF
Sbjct: 314 LMLETLELTKDI---PATVDVYVTAMGDASKIEAIKIAQSLRSELPHLRV-MSHCGGGNF 369

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q+K AD+    +A++ G  E +   + +K L + KE                 Q  + 
Sbjct: 370 KKQMKRADKSGAQVALVIGEDELANNQVAVKYLREKKE-----------------QELVA 412

Query: 478 ISELVSTVKKIL 489
              L + + +++
Sbjct: 413 RDALATYIAELI 424


>gi|308174457|ref|YP_003921162.1| histidyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607321|emb|CBI43692.1| histidyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554376|gb|AEB24868.1| histidyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912781|gb|AEB64377.1| histidyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 424

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 99/471 (21%), Positives = 180/471 (38%), Gaps = 51/471 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E      +   +R     Y +  I TP+ E+++   + + +  D 
Sbjct: 1   MAYHIPRGTQDILPGESDRWQFVEQIMRETCRTYQYKEIRTPIFEHTELFARGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV--FPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA   R   EN        P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFEDRKGRSLTLRPEGTAAAVRAFNENKLFANPVQPTKLYYVGPMFRYERPQTG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           RFRQF Q  ++ +GS     DAE+  +        G+K     +    ++       E +
Sbjct: 121 RFRQFYQFGIEAIGSKDPAVDAEVIALAMSIYRKAGLKNVKLVLNSLGDQDSRKAYREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + ++ E        D   +     +++L  + + D   +  K A         ++ 
Sbjct: 181 VKHFEPRIGEF-----CSDCQSRLHTNPLRIL--DCKKDREHELMKTA-------PSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+                    E+       + + +   G      +I   +VRGL+YY
Sbjct: 227 YLN--------------------EESAAYFQKVQQYITALGIP---FEIDPNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +                ++ GGGRYDGLV +  G   P  GF++ I RL+ A+
Sbjct: 264 NHTAFEIMSNAEGF------GAITTLAGGGRYDGLVEQIGGPEAPGIGFAMSIERLLAAI 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            + +     +     +    +     +          LR AGI +E+    +K    Q K
Sbjct: 318 DAEK---TELPVNQGIDCYIVTLGEKAKDYSVSLVYKLREAGISSEIDY-ENKKMKGQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ADR       I G  E ++  + +KD   G++    +       +A   Q
Sbjct: 374 TADRLGARFIAILGEDELAQNKINVKDAETGEQREVVLDELIQVLKADQKQ 424


>gi|313894765|ref|ZP_07828325.1| histidine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976446|gb|EFR41901.1| histidine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 421

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 96/462 (20%), Positives = 181/462 (39%), Gaps = 52/462 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E+     +   IR + + YG+  I TP  E+++   + + D  D 
Sbjct: 1   MLTKAPRGTKDILPGEVGAWTHVERVIRGLCDRYGYKEIRTPHFEHTELFQRGIGDGTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
            +K +++  D   + ++LR + TA   R   E+         + + IG +FR ++   GR
Sbjct: 61  VDKEMYTFTDRGDRSLTLRPENTAAAIRAYLEHKFYADGGLQKLFYIGSMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIG 183
            R+F Q  V+ VG  +   DAE+ ++  D LE +G++     +  +   K      E++ 
Sbjct: 121 MREFHQFGVEAVGEESPAVDAEIILLALDFLEELGLEGLTLKLNAVGCPKCRPAYRERLQ 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  + L E        D  D++    +++L  + + D +  F  GA         +   
Sbjct: 181 AYFKEYLGEL-----CHDCQDRYTRSPLRIL--DCKADAAQPFMAGA-------PAITDC 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +       +   +                               + + +VRGL+YYT
Sbjct: 227 LCAECAAHFDAVQSYLTAA-----------------------GVSYTLDTRLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E                  +V GGGRYDGLV    G   PA GF+ G+ R+++AL 
Sbjct: 264 RTAFEIAYP--------PLGAQSAVAGGGRYDGLVEELGGSPTPAVGFAAGMERVLLALT 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +  +   + + +        LR  G+RA M   + ++   Q+K 
Sbjct: 316 QQNLLPEEPPAAD---VFIIALGAAAGAAAFPLLHDLRRGGVRALMDY-AGRSMKAQMKQ 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++     A+I G  E   G   ++D+ +  + +  + +   
Sbjct: 372 ANKAGARYAVILGEDELRSGTAALRDMTESAQETIPLADMVQ 413


>gi|163802474|ref|ZP_02196367.1| histidyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173775|gb|EDP58590.1| histidyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 422

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 107/481 (22%), Positives = 190/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG  DC   +  +  ++ ++++N    YG++ +  P++E ++   + +
Sbjct: 1   MAK----KIQAIRGMNDCLPTQSPLWQKLENAVKNTVSAYGYNEVRMPIVEETNLFSRAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEETDVVSKEMYTFDDRNGDSLTLRPEGTAGCVRACIQNSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G +    DAE+ MM A     +G                   +
Sbjct: 117 PQKGRYRQFHQCGVEVFGLNGPDVDAELIMMTARLWRELGINEHVRLELNSIGSQEDRAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALVAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L EL+            L                  
Sbjct: 216 QAILGDAPRLSEYLGEESKAHFAGLCELLDAAGIEYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G++ PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKSTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE +         V +  +     ++       + LR A  G+R  
Sbjct: 305 FAMGLERLVLMLETLELTEVRRS----VDVYVVTAGEGTMMAGMKLAEQLREAAPGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q K AD+    +A++ G  E +   + +KDL  G++ +           
Sbjct: 360 MNHFGGGNFKKQFKRADKVGAVVALVLGENEVAENTVVLKDLVGGEQETYNQSEVAEKIA 419

Query: 469 A 469
           A
Sbjct: 420 A 420


>gi|329926776|ref|ZP_08281184.1| histidine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328938976|gb|EGG35344.1| histidine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 417

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 93/461 (20%), Positives = 177/461 (38%), Gaps = 52/461 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + E P G  D     +     I +  R++   Y +  I TP+ E ++   + + +  D  
Sbjct: 5   KFEKPTGTQDILPGAVEKWQFIEEKARDLCRRYNYREIRTPIFEQTELFERGVGETTDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++ +D   + ++LR + TA + R   +N         + Y +GP+FR E+   GR+
Sbjct: 65  EKEMYTFKDKGDRSMTLRPEGTAGVVRAYVQNKLYGEPDVTKLYYMGPMFRYERPQAGRY 124

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+  G++    DAE+  +     + +G+      I       +        L 
Sbjct: 125 RQFHQFGVEVFGTADPAIDAEVIALGYSFYKELGLNGVKAEINSVGTPEVRAAYRSALLA 184

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             + + + L      D   +     +++L  +      GD              ++  L 
Sbjct: 185 FLEPMKDSL----CSDCQSRMERNPLRVLDCKKDQGKFGD-----------APSILDSLD 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                               E+       +   +   G      +I+  +VRGL+YYT  
Sbjct: 230 --------------------EECSTHFEKVKGHLDAMG---IEYEINPRLVRGLDYYTHT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E         + Q      +VGGGGR++GLV +  G + P  GF IG+ R+ + L+  
Sbjct: 267 AFEF--------KAQGIGAIDTVGGGGRFNGLVGQIGGPDQPGIGFGIGLERIQLILEHQ 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             + +  K +    +  +     +  +       LR+ G+ AE      +    Q+K AD
Sbjct: 319 GVNLSASKPLD---VYLVALGEAAERELAKLIYDLRSKGVSAERDY-LGRKMKAQMKSAD 374

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           R       I G  E +RG + +K +  G++ +  + +    
Sbjct: 375 RLQARYTAILGDDELARGEIALKSMETGEQRTVRLDSLVQE 415


>gi|91225138|ref|ZP_01260360.1| histidyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91190081|gb|EAS76352.1| histidyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 422

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 107/481 (22%), Positives = 190/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++ ++++N+   YG++ +  P++E ++   + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKLENTVKNVISAYGYNEVRMPIVEETNLFSRAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEETDVVSKEMYTFDDRNGDSLTLRPEGTAGCVRSCIQNSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G +    DAE+ MM A     +G                   +
Sbjct: 117 PQKGRYRQFHQCGVEVFGLNGPDVDAELIMMTARLWRELGINEHVRLELNSIGSQEDRAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALVAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L EL+            L                  
Sbjct: 216 QAILGDAPRLSDYLGEESKAHFAGLCELLDAAGIKYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE +         V +  +     ++       + LR +  G+R  
Sbjct: 305 FAMGLERLVLMLETLELTDVRRS----VDVYVVTAGEGTMMAGMKLAEQLRESVPGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q K AD+    +A++ G  E +   + +KDLA G++ +           
Sbjct: 360 MNHFGGGNFKKQFKRADKVGAVVALVLGENEVADNTVVLKDLAGGEQETYNQAEVAEKIA 419

Query: 469 A 469
           A
Sbjct: 420 A 420


>gi|167465424|ref|ZP_02330513.1| histidyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322382956|ref|ZP_08056788.1| histidyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153076|gb|EFX45534.1| histidyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 424

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 95/475 (20%), Positives = 182/475 (38%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    ++    R+     NI   +G+  I +P+ E+++   + + +  D 
Sbjct: 1   MSIQKPKGTQDIIPGQVEKWQRLEKLAGNICRRFGYREIRSPIFEHTELFSRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + ISLR + TA + R   EN         + Y  GP+FR E+   GR
Sbjct: 61  VEKEMYTFEDKGKRNISLRPEGTAGVVRAYIENKLYGEPDLTKLYYFGPMFRYEQPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQF Q  V+ +GS+    DAE   +    L  +G+K      +       R +    + 
Sbjct: 121 NRQFHQFGVEAIGSADPGLDAEAIALGFTFLREIGLKDVRIEINSVGTPAVRSVYREKIR 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      DKL          D   ++    +++L  +                 E    +
Sbjct: 181 EFFAPVKDKL--------CKDCQSRYDRNPMRILDCKIDQKY-----------GEGAPSI 221

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L  +       +  ++                               ++  +VRGL+
Sbjct: 222 LDYLDEECSVHFETVKSMLTDME-----------------------IPFDVNHRMVRGLD 258

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E         +        +VGGGGRY+GLV    GQ+ P  GF++G+ R+++
Sbjct: 259 YYTHTAFE--------YKAAGIGAIDTVGGGGRYNGLVGEIGGQDQPGVGFALGVERILL 310

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L++        + +    +  +     +          LR  G+  E      +    Q
Sbjct: 311 LLEAQGVEFAKPESLD---LYVIGLGEAAERAIVKLVHQLRLEGLSTEKDY-QGRKIKAQ 366

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +K ADR +     I G  E  RG + +K +A G++ +  ++      + ++ + T
Sbjct: 367 MKSADRLHAAYVAILGDDELERGEITVKHMATGEQETLPLEGFSQAMKKKINKAT 421


>gi|329960090|ref|ZP_08298554.1| histidine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328533042|gb|EGF59815.1| histidine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 453

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 152/485 (31%), Positives = 219/485 (45%), Gaps = 61/485 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGLTDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTHFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILSGIAEIIGESDK-----IVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                 N++ E I  +     LS   E+ +  L E++  +  G KG  E   I + +   
Sbjct: 227 ------NISDEAIAKLQPIILLSGTNEEKLLTLKEVLAASETGLKGVEESEFILKTLSVL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G N N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 GLN-NEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  L+           +L         + S        +R 
Sbjct: 331 MSGVSGVGISFGADRIFDVLNQLDLYPKEAVNGTQLLFINFGEKEAAFS--LDVLAKVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  +SK    Q+ YA+ +  P   + G  E + G + +K++  G++     + 
Sbjct: 389 AGIRAEIFPDASK-MKKQMGYANSKGIPFVALVGENEMNEGKVTLKNMETGEQKLVSPQE 447

Query: 463 NESWR 467
             S  
Sbjct: 448 LISEL 452


>gi|269965171|ref|ZP_06179305.1| histidyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269830157|gb|EEZ84384.1| histidyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 422

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 108/481 (22%), Positives = 190/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++ ++++N+   YG++ +  P++E ++   + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKLENTVKNVISAYGYNEVRMPIVEETNLFSRAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEETDVVSKEMYTFDDRNGDSLTLRPEGTAGCVRSCIQNSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G +    DAE+ MM A     +G                   +
Sbjct: 117 PQKGRYRQFHQCGVEVFGLNGPDVDAELIMMTARLWRELGINEHVRLELNSIGSQEDRAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALVAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L EL+            L                  
Sbjct: 216 QAILGDAPRLSDYLGEESKAHFAGLCELLDAAGIKYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE +         V +  +     ++       + LR +  G+R  
Sbjct: 305 FAMGLERLVLMLETLELTDVRRS----VDVYVVTAGEGTMMAGMKLAEQLRESVPGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q K AD+    LA++ G  E +   + +KDLA G++ +           
Sbjct: 360 MNHFGGGNFKKQFKRADKVGAVLALVLGENEVADNTVVLKDLAGGEQETYNQAEVAEKIA 419

Query: 469 A 469
           A
Sbjct: 420 A 420


>gi|153833517|ref|ZP_01986184.1| histidyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|269962410|ref|ZP_06176760.1| histidyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|148870168|gb|EDL69109.1| histidyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|269832906|gb|EEZ87015.1| histidyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 422

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 106/481 (22%), Positives = 188/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG  DC   +  +  ++ +++++    YG++ +  P++E ++   + +
Sbjct: 1   MAK----KIQAIRGMNDCLPTQSPLWQKLENAVKSTVSAYGYNEVRMPIVEETNLFSRAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEETDVVSKEMYTFDDRNGDSLTLRPEGTAGCVRACIQNSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G +    DAE+ MM A     +G                   +
Sbjct: 117 PQKGRYRQFHQCGVEVFGLNGPDVDAELIMMTARLWRELGINEHVRLELNSIGSQEDRAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALVAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L EL+            L                  
Sbjct: 216 QAILGDAPRLSEYLGEESKAHFAGLCELLDAAGIEYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G   PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGSATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE +         V +  +     ++       + LR A  G+R  
Sbjct: 305 FAMGLERLVLMLETLELTDVRRS----VDVYVVTAGEGTMMVGMKLAEQLREAIPGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q K AD+    +A++ G  E +   + +KDL  G++ +           
Sbjct: 360 MSHFGGGNFKKQFKRADKVGAVVALVLGENEVAENTVVLKDLVGGEQETYNQAEVAEKIA 419

Query: 469 A 469
           A
Sbjct: 420 A 420


>gi|291085038|ref|ZP_06570910.1| histidine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291071731|gb|EFE09840.1| histidine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 414

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 104/462 (22%), Positives = 184/462 (39%), Gaps = 60/462 (12%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    E  I  RI  +++N+  +YG+  I  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  ++LR + TA   R   E+        R + IGP+FR+E+   GR+RQF Q  V
Sbjct: 61  EDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGLHGDD 188
           +  G      DAE+ M+ A    A+GI ++     +    +  R      L        D
Sbjct: 121 EVFGLQGPDIDAELIMLTARWWRALGISQHVSLELNSIGSLEARASYRDALVAYLEQHKD 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           KL+E        D   +     +++L  +     +                +  +L  D 
Sbjct: 181 KLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LLNDAPQLGDYLDDDS 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +    L +L++           L                       VRGL+YY   V+E
Sbjct: 224 REHFAGLCKLLESAGIAYTVNQRL-----------------------VRGLDYYNRTVFE 260

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            +               G+V  GGRYDGLV +  G+  PA GF++G+ RL++ ++++   
Sbjct: 261 WVTSS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVN-- 310

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADR 426
                    V I  +   +D+ S      + LR    G++     G   NF  Q   AD+
Sbjct: 311 -PEFIASPVVDIYLVASGTDTQSAAMRLAERLRDEVPGVKLMTNHGGG-NFKKQFARADK 368

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
               +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 369 WGARVALVLGESEVANGTVVVKDLRSGEQTAVAQDSVAAHLR 410


>gi|303229444|ref|ZP_07316234.1| histidine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|303230874|ref|ZP_07317621.1| histidine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514634|gb|EFL56629.1| histidine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302515980|gb|EFL57932.1| histidine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 423

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 106/467 (22%), Positives = 186/467 (39%), Gaps = 60/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   ++I   + I   +R I + YGF  I TP  E +    + + +  D 
Sbjct: 1   MAIKRPRGTQDFLPEQIVNWHYIEQHMREICKAYGFSEIRTPAFEDTKLFLRGIGETTDV 60

Query: 66  PNKGVFSLQ--DDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGP 122
            +K +++    DD  Q  +LR + TA   R   EN         + + +G +FR++K   
Sbjct: 61  VSKEMYTFSTGDDKEQSYTLRPENTASAVRAYLENKVYGKENLTKWFYMGSMFRHDKPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR+R+F Q   + +GS +   D+E+  M+   L+  G+K      +     N R      
Sbjct: 121 GRYREFHQFGAEVLGSPSPVVDSEVICMIVQLLKDFGLKDLNVEVNSVGCPNCRPTYRQK 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L +      D+L          D  ++     ++  L + + +     + GA        
Sbjct: 181 LIEFFEPKKDQL--------CEDCQERLYKNPLR--LLDCKNETCKALSVGA-------P 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   L  +      EL  L+                          + +  ++  +VRG
Sbjct: 224 EIHEHLCEECNTHFEELKTLLDAA-----------------------NIQYNLNPRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E                  +V GGGRYDGLV    G + PA GF++G+ RL
Sbjct: 261 LDYYTKTAFEVQYT--------PLGAQSAVAGGGRYDGLVEELDGPHTPAIGFAMGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL+          E     +  +     +  +     Q LR+A I AEM  G  K+  
Sbjct: 313 LLALEKQNLLPEPTIEPA---VFVVALGEAAKLEAFKICQTLRSAYITAEMD-GQGKSMK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            QLKYA++ +    II G  E ++    I+ +   ++ +  + +   
Sbjct: 369 AQLKYANKIHAKYVIIVGDDELAKQEAIIRFMETSEQETVPLASVSE 415


>gi|169831068|ref|YP_001717050.1| histidyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|229558654|sp|B1I363|SYH_DESAP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|169637912|gb|ACA59418.1| histidyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 420

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 105/465 (22%), Positives = 191/465 (41%), Gaps = 53/465 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG +D    +     R+   IR++   YG+  I TPL E ++   + + D  D 
Sbjct: 1   MLISRPRGTSDLLPGDTARWQRVEAVIRDLCRVYGYGEIRTPLFEATELFQRGVGDITDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ ++LR + TAP+ R   EN       P + + +GP+FR ++   GR
Sbjct: 61  VEKEMYTFTDKGGRSLTLRPEGTAPVTRAYLENGLHAVPQPVKLFYVGPMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKIG 183
           +RQF Q  V+  G++   ADAE+  +     + +G+   + H+          +L  K+ 
Sbjct: 121 YRQFHQFGVEIFGAADPAADAEVIALAMHFFDRLGLAGLELHLNSVGCPGCRAVLRRKLA 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            + + + +E     R         L+   L L + + +   +  +GA +        V +
Sbjct: 181 DYFEPRADELCANCR-------GRLRKNPLRLLDCKEERCREAGRGAPVP-------VDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +       +   +                              K++  +VRGL+YYT
Sbjct: 227 LCPECGGHFGRVQRYLD-----------------------LLGISFKLNPCLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E ++               +VGGGGRYDGLVS   G  VP  GF++G+ R  + L 
Sbjct: 264 RTAFEILVPGG--------GAQDAVGGGGRYDGLVSAIGGPAVPGVGFALGLERT-LLLW 314

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           S ++    + +   V I T     ++     +    LR AG+ A+    + ++   Q+K+
Sbjct: 315 SRQAGEEVLPQGPVVFIATAGETEET---ATVLLSGLRAAGVPADREY-TGRSLKAQMKF 370

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           A +      II G  E   G + ++D+  G +    +        
Sbjct: 371 AAKLGARWVIIVGKDELEAGEVILRDMGAGLQTRVSLGEVVERLR 415


>gi|188533175|ref|YP_001906972.1| histidyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|229558666|sp|B2VE90|SYH_ERWT9 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|188028217|emb|CAO96075.1| Histidyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 425

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 102/474 (21%), Positives = 177/474 (37%), Gaps = 72/474 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  +  R+   ++ +  +YGF  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAVWQRVEQILKQVLSSYGFSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ MM A   +A+G                   N
Sbjct: 117 PQKGRYRQFHQIGAEVFGLQGPDIDAELIMMTARWWKALGIADHVSLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRNALVAFLEQHIEVLDE------------DCKRRMYSNPLRVLDSKN---------PDI 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  +  +    L   +       +    L                  
Sbjct: 216 QALLNDAPALGDYLDDESREHFAGLCHQLDAAGIAYRVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVT--------DSLGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       + M  V +  +       S   +  + LR A   ++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFEPMRVVDVYVIASGDGVQSAAMLLAERLRDALPELKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              G   NF  Q   AD+    +A++ G  E +   L IKDL  G++ +    +
Sbjct: 362 TNFGGG-NFKKQFARADKWGARIALVLGEDEVANKQLVIKDLRNGEQQTLAQSD 414


>gi|32458|emb|CAA28956.1| unnamed protein product [Homo sapiens]
          Length = 508

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 103/476 (21%), Positives = 194/476 (40%), Gaps = 29/476 (6%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +          V+R +     
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHI---AKVYRRDNPAMT 164

Query: 124 RFRQFIQCDVDN-VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
             R      VD  +    +  + +   +         ++  ++ + +N+R+ILDG+    
Sbjct: 165 GGRYPNSITVDFDIAGQFDPMNPDAESLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVC 224

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+       +   +  ++DKLDK   + VK            +      L  E  D +  
Sbjct: 225 GVPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGD 269

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++      S+ E       +       +G  +L ++ E +   G   ++I    ++ RGL
Sbjct: 270 YVQQHGGVSLVEQLVQDPKLSQNKQALEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGL 328

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISR 357
           +YYTG +YEA+L      E ++P   G  G   RYDGL  +   + + V   G      R
Sbjct: 329 DYYTGVIYEAVLLQTPAQEGEEPWC-GQCGCWRRYDGLVGMFDPQRRKVAMCGAQHWGGR 387

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +   ++    +           +                   L  AGI+AE+    +   
Sbjct: 388 IFSIVEQRLEALEEKIRTTETQVLVASAQKKLARGKTKACLRLWDAGIKAELLYKKNPKL 447

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            NQL+Y +    PL  I G  E   G+++++ +   +E+    +      + R  Q
Sbjct: 448 LNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREELVEEIKRRTGQ 503


>gi|293394876|ref|ZP_06639166.1| histidine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291422627|gb|EFE95866.1| histidine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 424

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 102/477 (21%), Positives = 182/477 (38%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +  RI  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPEDTALWQRIEGTLKQVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ ++ A   +A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDVDAELILLTARWWKALGIAEHVKLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     DD            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHVELLDD------------DCKRRMYSNPLRVLDSKN---------PQV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D +     L EL+            L                  
Sbjct: 216 QALLNDAPRLSEYLDADSKAHFDGLCELLTLAGIPYTINERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTSS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAE 408
           F++G+ RL++ ++++     + K    + I  +   + + S      + +R A   ++  
Sbjct: 305 FAMGLERLVLLVQAVN---PDFKAPATIDIYVISSGAGTQSAAMRLAEAVRDAAPQLKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              G   NF  Q+  AD+    +A+I G  E +   + +KDL  G++ +       +
Sbjct: 362 TNYGGG-NFKKQITRADKWGARVALILGENEVAAQQVVVKDLRSGEQETLAQSELAA 417


>gi|255994167|ref|ZP_05427302.1| histidine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993835|gb|EEU03924.1| histidine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 418

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 106/460 (23%), Positives = 191/460 (41%), Gaps = 51/460 (11%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  D   KE  +   + +    +  +YG++ I TP++EY++   + +    D   K +
Sbjct: 5   PKGTKDLMPKETALFRYLENEFLKVASSYGYNEIMTPVIEYTELFSRGVGSGTDIVQKEM 64

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++ +D  G+ ISLR + TA +AR   ++   +   P +   +   FR EK   GR R F 
Sbjct: 65  YTFKDLGGRSISLRPEGTAGVARAYVQSGELSKAKPVKYSYVSSCFRYEKPQSGRQRMFH 124

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIGLHGDD 188
           Q  ++  GS    ADAE+ M+ +D L  +G+K        I   K  +   E +  + + 
Sbjct: 125 QLGIECFGSKEVQADAEVIMLASDFLNNIGLKEITLKINSIGCNKCREKYKEALVKYYES 184

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                           K  L    + L + + D    ++  A         ++ F+  + 
Sbjct: 185 VSENLCETC-------KIRLNTNPMRLLDCKEDECTKYSSDA-------PSILDFICSEC 230

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                +L EL+                            + ++   IVRGL+YY    +E
Sbjct: 231 ANDFSKLQELLTDA-----------------------GIQYEVDPRIVRGLDYYNKTAFE 267

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            I         +      +V GGGRYD L++   G   P  GF IG+ RL++A+ S    
Sbjct: 268 FI--------HENIGAKATVCGGGRYDNLINTLAGIEEPGIGFGIGLERLMLAIDSENID 319

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +       V+I     ++    K     +MLR +G    + +  ++NF + +KYA++ N
Sbjct: 320 KSISTSPEYVIIPA--GENVPYEKIYAIAKMLRNSGKTVVVDI-MNRNFKSLIKYANKIN 376

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              A+I G  E     + +K++A G + + +I    + +E
Sbjct: 377 AKYALILGEDELKNEAVTVKNMASGDQKTVKISELVNSQE 416


>gi|59711237|ref|YP_204013.1| histidyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197336212|ref|YP_002155387.1| histidyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|75507079|sp|Q5E771|SYH_VIBF1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229470703|sp|B5FAX3|SYH_VIBFM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|59479338|gb|AAW85125.1| histidyl tRNA synthetase [Vibrio fischeri ES114]
 gi|197317702|gb|ACH67149.1| histidyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 422

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 108/475 (22%), Positives = 185/475 (38%), Gaps = 73/475 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++  S++ +   YG++ +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKVEGSVKRVISAYGYNEVRMPIVEQTHLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQVGVEVFGLNGPDVDAELIMMTARLWRELGIDQHVRLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALVAFLEQHLDVLDE------------DCKRRMHTNPMRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D +     L EL+       +    L                  
Sbjct: 216 QAILGDAPKLSEYLDDDSKAHFSGLCELLDAAGIQYQVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKTTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++LE +         V +  +     +L       + LR    G+R  
Sbjct: 305 FAMGLERLVLLMETLELTDVRRS----VDVYMVTAGEGTLMAGMKLAESLREQVPGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              G   NF  Q K AD     +A+I G  E +   + +KDL  G++++    + 
Sbjct: 361 CHFGGG-NFKKQFKRADNAGAAVALILGETEVAEQTVNVKDLRNGEQVTLPQSDV 414


>gi|293364647|ref|ZP_06611368.1| histidine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702905|ref|ZP_07639853.1| histidyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316905|gb|EFE57337.1| histidine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623585|gb|EFO02574.1| histidyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 426

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDAESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +     +  I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGV-SLPIENALDVYIAVLGEGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|320547659|ref|ZP_08041944.1| histidine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447734|gb|EFW88492.1| histidine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 425

 Score =  260 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 105/463 (22%), Positives = 173/463 (37%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPSESAKWQYVEAVARETFKKYNYSEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSFVENKLFAPEVQKPVKMYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E   M     + +GIK    H+               
Sbjct: 121 GRLREFHQVGVECFGSANPATDVETIAMAYQLFQTLGIKDVTLHLNTLGSAASRA---AY 177

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D L      L A D   +     +++L  + + D          +  E    ++ 
Sbjct: 178 RQALIDYLTPMRDKLSA-DSQRRLDENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + E++                          +    I + +VRGL+YY
Sbjct: 228 YLDEESQAHFDAVREMLDTL-----------------------NIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         ++  GGRYD LV  F G   P  GF +GI RL++ L
Sbjct: 265 NHTIFEFITTVDKSD--------LTICAGGRYDSLVEYFDGPETPGFGFGLGIERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +         KEM    I  +   ++   K     Q +R  G  AE      +    Q K
Sbjct: 317 EKQGIELPVEKEMD-TYIAVLGQGANI--KALGLVQAIRNQGFSAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD  N    I  G  E   G + +K+    +E+S      ES
Sbjct: 373 SADAFNAKTIITLGESEIEAGQVTVKNNKTREEVSASFAEIES 415


>gi|227112685|ref|ZP_03826341.1| histidyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 424

 Score =  260 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 102/473 (21%), Positives = 188/473 (39%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI +S++ +   YG++ I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPAETALWQRIENSLKQVLSGYGYNEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGDSLTLRPEGTAGCVRAGIEHGILYNQEQRLWYVGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ +M A     +GI  +     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELILMTARWWRVLGIADHVKLELNSIGSLDARAR 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D+L+E        D L +     +++L  +       +    A +  
Sbjct: 177 YREALVAFLEQHKDQLDE--------DCLRRMYTNPLRVLDTK--NPQIQELLNDAPV-- 224

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +       L EL+  +                            ++  
Sbjct: 225 -----LTDYLDDESRAHFEALGELLTQS-----------------------GIPYTVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDG+V +  G   PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTTS--------LGAQGTVCAGGRYDGMVEQLGGHATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++S+     + K    V    +   + +        + LR A   ++     G
Sbjct: 309 LERLVLLVQSVN---PDFKAQPSVDAYLISSGTGTQVAAMQLAEKLRDALPQLKLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q   AD+    +A++ G  E + G + +K+L+ G++ +    +  S
Sbjct: 366 GG-NFKKQFARADKWGARVALVLGENEVAAGQVVVKNLSNGEQDTLAQADVAS 417


>gi|315231483|ref|YP_004071919.1| histidyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315184511|gb|ADT84696.1| histidyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 437

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 128/470 (27%), Positives = 218/470 (46%), Gaps = 37/470 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+   R E  +G  D   +++  R  + + IR ++E YGF  I TP  EY+       
Sbjct: 1   MVKE---RIERVKGTRDLLPEDMAKRRWVFERIREVFEVYGFKEILTPTFEYTKLFQLRS 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E    K +++ +D  G+ ISLR DLT+ +AR     F  +  P + Y I  +FR E+ 
Sbjct: 58  GEE--VVKQLYAFKDKGGRDISLRPDLTSSVARLFVNKFQNVPKPVKWYYITNMFRYEEP 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+F Q  V+ +GS+   ADAE+  +M ++  + G+K  D+ + I +R +LD   +
Sbjct: 116 QSGRLREFWQAGVELIGSANIEADAEVIALMIESYLSTGLK--DFTVNIGDRVLLDEFAK 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +G+  D      + ++R IDK DK   +     L +              L+ E ++ +
Sbjct: 174 MLGVEDD------IGLMRLIDKKDKMSREDFIAALKDF------------GLSDEAVEKV 215

Query: 241 VSFLSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  + +  +   +      +  +   ++   ++  + EL++  G   +   I   I RG 
Sbjct: 216 LFLIELKGKPDEILPKAYELFKSDKAKEELKKIEELFELLKAYGVY-DYALIDFGIARGF 274

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT  V+EAI    +                 RYD L+  F G+  PATGF+IGI RLI
Sbjct: 275 DYYTSIVFEAIAPNDLGIGSIGGGG--------RYDNLIEVFGGKPTPATGFAIGIERLI 326

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L+S     +       V +  +  + +  +K    TQ LR AGI+AE  L   +    
Sbjct: 327 PILESKGLLPSFRLSPD-VFVVYIGKELEVKAKAIEITQALRKAGIKAEYDL-QGRKLRK 384

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            L+YAD+   P+ +I G  + + G   I+D+A G++ S  I+      + 
Sbjct: 385 ALEYADKLEIPVVVILGKRDLAEGKATIRDMATGEQKSVAIEKIAKEVKE 434


>gi|156973381|ref|YP_001444288.1| histidyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166228629|sp|A7MZE2|SYH_VIBHB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|156524975|gb|ABU70061.1| hypothetical protein VIBHAR_01068 [Vibrio harveyi ATCC BAA-1116]
          Length = 422

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 106/481 (22%), Positives = 189/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG  DC   +  +  ++ +++++    YG++ +  P++E ++   + +
Sbjct: 1   MAK----KIQAIRGMNDCLPTQSPLWQKLENAVKSTVSAYGYNEVRMPIVEETNLFSRAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEETDVVSKEMYTFDDRNGDSLTLRPEGTAGCVRACIQNSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G +    DAE+ MM A     +G                   +
Sbjct: 117 PQKGRYRQFHQCGVEVFGLNGPDVDAELIMMTARLWRELGINEHVRLELNSIGSQEDRAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +     +       
Sbjct: 177 YRTALVAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKNPEVQA------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L EL+            L                  
Sbjct: 218 --ILGDAPRLSEYLGEESKAHFAGLCELLDAAGIEYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G   PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGSATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE +         V +  +     ++       + LR A  G+R  
Sbjct: 305 FAMGLERLVLMLETLELTDVRRS----VDVYVVTAGEGTMMVGMKLAEQLREAIPGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q K AD+    +A++ G  E +   + +KDL  G++ +           
Sbjct: 360 MSHFGGGNFKKQFKRADKVGAVVALVLGENEVAENTVVLKDLVGGEQETYNQAEVAEKIA 419

Query: 469 A 469
           A
Sbjct: 420 A 420


>gi|304437075|ref|ZP_07397038.1| histidine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370026|gb|EFM23688.1| histidine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 421

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 92/462 (19%), Positives = 172/462 (37%), Gaps = 52/462 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D     +     +   IR++   YG+  I TP+ E+++   + + D  D 
Sbjct: 1   MLTNAPRGTKDILPDAVGAWTHVEHVIRDLCARYGYGEIRTPIFEHTELFQRGIGDGTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGR 124
            +K +++  D   + ++LR + TA   R   +N         + + IG +FR ++   GR
Sbjct: 61  VDKEMYTFSDRGDRSLTLRPENTASAVRAYLQNKLYADGGLQKLFYIGSMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLE-AVGIKRNDYHIGINNRKILDGILEKIG 183
            R+F Q  V+ +G  +   DAE+ ++  D L              +          E++ 
Sbjct: 121 MREFHQFGVEALGEESPALDAEVILLAYDFLTVLGLTGLTLKLNSVGCPACRPVYRERLQ 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  + L          D  D++    +++L  + + D    F  GA         +   
Sbjct: 181 AYFKEYL-----PTLCDDCKDRYTRSPLRIL--DCKRDAEQPFMTGA-------PAITDC 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L     +   ++ + +       +    L                       VRGL+YYT
Sbjct: 227 LCPACTEHFEQVQQHLTAAGVSYELDPRL-----------------------VRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E                  +V GGGRYDGLV    G   PA GF+ G+ R+++AL+
Sbjct: 264 RTAFEIAYP--------PLGAQSAVAGGGRYDGLVEELGGNPTPAVGFAAGLERVLLALE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +  +     +          LR  G+RA M   + ++   Q+K 
Sbjct: 316 QQNLLPVQPPAAD---VFLIALGDAAAKAAFPLLHELRHGGVRALMDY-AGRSMKAQMKQ 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A+R     A+I G  E +     ++D+A+  + +  + +   
Sbjct: 372 ANRSGARYAVILGEDELAAHTALVRDMAESAQETCALDDLVE 413


>gi|153809521|ref|ZP_01962189.1| hypothetical protein BACCAC_03839 [Bacteroides caccae ATCC 43185]
 gi|149127829|gb|EDM19052.1| hypothetical protein BACCAC_03839 [Bacteroides caccae ATCC 43185]
          Length = 454

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 154/505 (30%), Positives = 224/505 (44%), Gaps = 79/505 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     L+    + +  L E++  +  G KG  E   I   +   
Sbjct: 227 ------GISDEAIAKLQPIILLNGTNAEKLGTLKEVLSTSEVGLKGVEESEFILNTLETM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           VL         + S        +R 
Sbjct: 331 MSGVSGVGISFGADRIFDVLNQLELYPKEAVNGTEVLFINFGEKEAAFS--MGVLAKVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  +SK    Q+ YA+ +N P   I G  E + G + +K++  G++       
Sbjct: 389 AGIRAEIFPDASK-MKKQMSYANAKNIPFVAIVGENEMNEGKVMLKNMETGEQN------ 441

Query: 463 NESWREARVAQITIPISELVSTVKK 487
                        +   EL++ VK+
Sbjct: 442 ------------LVSAEELIAAVKR 454


>gi|242242903|ref|ZP_04797348.1| histidyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233618|gb|EES35930.1| histidyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 424

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 97/465 (20%), Positives = 188/465 (40%), Gaps = 48/465 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++      I + +  + E Y +  I TP+ E ++   + + D  D   
Sbjct: 2   IKMPRGTQDILPQDSAKWRYIENRLHTLMELYNYKEIRTPIFESTELFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D  G+ ++LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGGRSLTLRPEGTAAVVRSYIEHKMQGEPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+ +G+   + DAE+  M+    E+ G+K    H+ +    I D    K    
Sbjct: 122 RQFNQFGVEAIGAENPSIDAEILAMVMHIYESFGLK----HLKLVINSIGDSESRKEYNE 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              K  E +I     D   +     +++L  +   D             +    +  +L+
Sbjct: 178 ALVKHFEPVIDTFCSDCQSRLHTNPMRILDCKIDRDKE---------AVKNAPRITDYLN 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D +    ++   +                          +        +VRGL+YYT  
Sbjct: 229 NDSKSYYEQVKLHLDNL-----------------------NISYVEDPNLVRGLDYYTHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E ++  P     +      ++ GGGRY+GL+    G +    GF++ I RL++AL   
Sbjct: 266 AFELMIDNP-----EYDGAITTLCGGGRYNGLLQLLDGPDETGIGFALSIERLLMALDEE 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             S +  ++     +  +    D+          LR  GI+ +     ++    Q+K AD
Sbjct: 321 GISLDVSEDFD---LFVVTMGEDADRYAVKLINDLRRNGIKVDKDY-LNRKIKGQMKQAD 376

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           R N    ++ G  E     + +K++  G+  + ++    ++ + R
Sbjct: 377 RLNAKYTVVIGDQELENNEIGVKNMISGETENVQLDELINYFKNR 421


>gi|90579364|ref|ZP_01235174.1| histidyl-tRNA synthetase [Vibrio angustum S14]
 gi|90440197|gb|EAS65378.1| histidyl-tRNA synthetase [Vibrio angustum S14]
          Length = 422

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 108/481 (22%), Positives = 192/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   +  +  ++  +++ +   YG++ +  P++E +    + +
Sbjct: 1   MAKQ----IQAIRGMNDCLPTQSPLWQKVEGTVKQVISAYGYNEVRMPIVESTHLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   +N        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIQNGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK---------RNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ MM A     +GI                   
Sbjct: 117 PQKGRYRQFHQVGVEVFGLNGPDIDAELIMMTARLWRELGIHEHVRLELNSIGSLEARAE 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            RK L   LE+     D+            D   +     +++L  +       +    A
Sbjct: 177 YRKALIAFLEQHLDVLDE------------DAKRRMYTNPLRVLDTKNSA--IQEILVDA 222

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+       +    L                  
Sbjct: 223 -------PKLSEYLDPESKEHFDGLCELLDAAGIKYQVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  P+ G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPSVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAE 408
           F++G+ RL++ +++LE           V +  +     +L+      + LRT  +G+R  
Sbjct: 305 FAMGLERLVLLMEALEQDEVRRS----VDVYVVTAGEGTLAVGMTLAEKLRTEVSGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q K AD     +A++ G  E +   + +KDL  G++ +       +   
Sbjct: 361 THFGGG-NFKKQFKRADNVGAAVALVLGENEIAENTVVVKDLHGGEQTTMAQDEVAAKLA 419

Query: 469 A 469
           A
Sbjct: 420 A 420


>gi|113955389|ref|YP_729468.1| histidyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123328026|sp|Q0IDK4|SYH_SYNS3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|113882740|gb|ABI47698.1| histidyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 428

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 103/470 (21%), Positives = 201/470 (42%), Gaps = 52/470 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   ++ R    +    R  +   G D I TPLLE++D   + + +  D  
Sbjct: 3   QLQTLRGMVDLLPEQTRRWQAVESVAREHFRCAGLDEIRTPLLEFTDLFARGIGEGTDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D   +  +LR + TA + R   ++        R +  GP+FR E+   GR R
Sbjct: 63  GKEMYTFLDRGDRSCTLRPEGTASVVRAALQHGLLSQGAQRLWYGGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+ +G+S+  +DAE+  +  D L  +GI+  +              +  +G   
Sbjct: 123 QFHQIGVEFLGASSPRSDAEVIALAWDLLTDLGIQGLNLE------------INSLGTPD 170

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D +        R   +L ++  + V+ L  E +   + +              ++     
Sbjct: 171 DRQ--------RFRSELVQWLEERVEQLDAESQARLTTNPL-----------RILDSKDK 211

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             ++ +++   L+K     ++  +    +  L+          +++  +VRGL+YY    
Sbjct: 212 GTQQLLNDAPTLLKAL--SKESVDRFEQVCALLTA---LQIPYQLNPRLVRGLDYYGHTA 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL- 365
           +E            +     +V GGGRYDGL+ +  G   PA G+++G+ RL++ + +  
Sbjct: 267 FEIT--------SDQLGAQATVCGGGRYDGLIQQLGGPVTPAIGWALGMERLLLVISAAA 318

Query: 366 ----ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
               + +   +      L+  ++    +  +     +  R AG+  E+  GSS +FG Q 
Sbjct: 319 QADPDGAAARLTATPSPLVYVINRGEQAEPQALSLARQWRGAGLAVELD-GSSASFGKQF 377

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREAR 470
           K ADR   P A++ G  E S G +++K L  +G+E     ++  S+   +
Sbjct: 378 KRADRSGAPWAVVLGDEEASAGQVRLKPLRGEGEEKQLTWEDALSYLMKQ 427


>gi|284036922|ref|YP_003386852.1| histidyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283816215|gb|ADB38053.1| histidyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 454

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 143/475 (30%), Positives = 233/475 (49%), Gaps = 47/475 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  LP+G  D   +++R R  I D+IR  ++ +GF PIETP LE   +L GK+  + D+ 
Sbjct: 3   KPTLPKGTRDFGPEQMRKRLFIFDTIRQTFQRFGFQPIETPSLENLSTLTGKYGEEGDQL 62

Query: 67  NKGVFSLQD-----------DDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCRT 108
              + +  D              + ++       LRYDLT P ARYV  N +++  P + 
Sbjct: 63  LFKILNSGDFAAGITELDLASGSKKLTPKIAEKGLRYDLTVPFARYVVMNRNSLTLPFKR 122

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y++ PV+R ++   GR+R+F QCD D VG+ +   +AE+ +M+ +    + I+  D+ + 
Sbjct: 123 YQMQPVWRADRPQKGRYREFYQCDADVVGTDSLLCEAEIVLMIHEVFRNLNIQ--DFTLK 180

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           INNRKIL GI E IG  G +       +  AIDKLDK G + V   L E    +      
Sbjct: 181 INNRKILAGIAEVIGAPGQE-----GTLSVAIDKLDKIGKEKVLNELRERGFSDE----- 230

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
               T+ +++ +  F S D  +++ +L   +  +    +G  EL    +LV + G + + 
Sbjct: 231 ----TTARMEPLFLFGSSDPNQTLDQLKSWLSASDTARQGIAELEETLQLVNQYGLSDST 286

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           ++I  T+ RGL YYTG ++E          K   V  GSV GGGRYD L   F    +  
Sbjct: 287 VEIDPTLARGLSYYTGAIFEV---------KANGVSIGSVSGGGRYDNLTGAFGMPGLSG 337

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G S G+ R+   ++ L     +  +     +  +  D+++ S      + LRTA I AE
Sbjct: 338 VGISFGVDRIYDVMEELNLFPADAGQGT--QVLIIPFDAEARSVALPVLRQLRTAAIAAE 395

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           M+   SK     L YA+ +N P  ++ G+ E   G+L +K++  G++L       
Sbjct: 396 MYPDLSK-VKKMLDYANAKNIPFVVLIGSEEVQTGVLSLKNMLTGEQLKVTTDEL 449


>gi|169829346|ref|YP_001699504.1| histidyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|229558694|sp|B1HV72|SYH_LYSSC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|168993834|gb|ACA41374.1| Histidyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 422

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 97/467 (20%), Positives = 180/467 (38%), Gaps = 49/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    +     ++   IR+I   Y ++ I TP+ E +D   + + +  D 
Sbjct: 1   MSFKVPRGTQDILPGQSEKWQKVEAIIRDICRVYRYNEIRTPIFEQTDLFARGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA + R   E+        P +   +GP+FR E+   G
Sbjct: 61  VQKEMYTFEDRGGRSLTLRPENTAGVVRAYVEHKMFGAPDQPVKLSYLGPMFRYERQQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  V+ +GS+    DAE+  +  D  E+ G+K     I     K          
Sbjct: 121 RYRQFVQFGVEAIGSADPAIDAEVIALAMDVYESAGLKDLKLVINSLGDKETRDTHRTAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           L    +  E  I     D  ++     +++L  +   ++    T            +  F
Sbjct: 181 L----QHFEPHIHEFCSDCQNRLQKNPLRILDCKVDREHPLMKT---------APALTEF 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ +      ++   +                               +   +VRGL+YY 
Sbjct: 228 LTEESAAYFAQVKSYLDTL-----------------------GITYVVDPNLVRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                ++ GGGRY+GLV    G +VP  GF++ I RL++AL+
Sbjct: 265 HTTFEIMSTASGF------GAITTLCGGGRYNGLVQEIGGPDVPGIGFALSIERLLLALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +       +     + +  +    D+  K    T   R  G+  EM     +    Q+K 
Sbjct: 319 AEGV---ELDTASGLDVYIIAMGEDAKQKAVELTSTFRAKGLATEMDY-LDRKMKAQMKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR      I+ G  E       +K +  G++         ++   +
Sbjct: 375 ADRLGAKYTIVLGETELEEQAAAVKHMESGEQHKVAFSELVNYLSQQ 421


>gi|307710978|ref|ZP_07647401.1| histidyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617218|gb|EFN96395.1| histidyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 426

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 103/461 (22%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLVS F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVSYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVTL-PIENALDVYIAVLGQGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|311694385|gb|ADP97258.1| histidyl-tRNA synthetase [marine bacterium HP15]
          Length = 426

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 103/457 (22%), Positives = 185/457 (40%), Gaps = 54/457 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +   +  ++R +   YG+  I  P++E +D   + +
Sbjct: 1   MAK-----IQAIRGMNDILPEQTPVWQFVESTVRRVLAQYGYQEIRMPIVEQTDLFKRSI 55

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R +  GP+FR+E+
Sbjct: 56  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAGCVRAAEEHGLLFNQTRRLWYTGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ ++ A   + +G+   ++     N        
Sbjct: 116 PQKGRYRQFHQIGVECFGMNGPDIDAELLILTARLWKELGL--AEHTRLEINSIGTSESR 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                   D L +    L A D   +     +++L  +  +              E    
Sbjct: 174 RVYRSALVDYLGQFKADLDA-DSQRRLESNPLRILDSKDPSTRK---------ILENAPS 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +L  +  +    L  L++                              ++  +VRGL
Sbjct: 224 LDDYLDEESREHFERLKALLEAA-----------------------GVNYSVNPALVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E I               G+V  GGRYDGLV +  G+   A GF++G+ RLI
Sbjct: 261 DYYGKTVFEWIT--------DSLGAQGTVCAGGRYDGLVEQLGGKPTFAVGFAMGLERLI 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI--RAEMFLGSSKNF 417
           + L++LE    ++     V +T M     +L+   +  + LR A +  R  +      +F
Sbjct: 313 LLLETLELVPEHVNSNADVYVTAMGEG--ALAPALVLAEQLRAA-LPERVIVSHCGGGSF 369

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            +Q+K ADR     A+I G  E + G   +K L   +
Sbjct: 370 KSQMKKADRSGARYAVILGENEVANGTAGLKPLRADE 406


>gi|312973245|ref|ZP_07787417.1| histidyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|310331840|gb|EFP99075.1| histidyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|323184425|gb|EFZ69800.1| histidyl-tRNA synthetase [Escherichia coli 1357]
          Length = 414

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 102/462 (22%), Positives = 182/462 (39%), Gaps = 60/462 (12%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    E  I  RI  +++N+  +YG+  I  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  ++LR + TA   R   E+        R + IGP+FR+E+   GR+RQF Q   
Sbjct: 61  EDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGC 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGLHGDD 188
           +  G      DAE+ M+ A    A+GI  +     +    +  R      L        +
Sbjct: 121 EVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARANYRDALVAFLEQHKE 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           KL+E        D   +     +++L  +     +                +  +L  + 
Sbjct: 181 KLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LLNDAPALGDYLDEES 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +    L +L++           L                       VRGL+YY   V+E
Sbjct: 224 REHFAGLCKLLESAGIAYTVNQRL-----------------------VRGLDYYNRTVFE 260

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            +               G+V  GGRYDGLV +  G+  PA GF++G+ RL++ ++++   
Sbjct: 261 WVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVN-- 310

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADR 426
               K    V I  +   +D+ S      + LR    G++     G   NF  Q   AD+
Sbjct: 311 -PEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHGGG-NFKKQFARADK 368

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
               +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 369 WGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 410


>gi|256425975|ref|YP_003126628.1| histidyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256040883|gb|ACU64427.1| histidyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 449

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 138/482 (28%), Positives = 226/482 (46%), Gaps = 56/482 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR 65
           ++  +P+G  D     +R R  I  +IR  +E +GF P+ETP +E  D+L GK+  + D 
Sbjct: 2   IKPSIPKGTRDFGPVVVRKRQYIFQTIRETFELFGFQPLETPTMENLDTLTGKYGEEGD- 60

Query: 66  PNKGVFSLQDDDG-----------QWI-------SLRYDLTAPLARYVAENFDTIVFPCR 107
             K +F + D+             + +       +LRYDLT P ARYV  N   +  P +
Sbjct: 61  --KLIFKILDNGDILGRAQQAKDSRELGILLCEKALRYDLTIPFARYVVMNQHELALPFK 118

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y++ PV+R ++   GR+R+F QCD D VGS++   + E+ ++       +G++  +  I
Sbjct: 119 RYQMQPVWRGDRPAKGRYREFYQCDADVVGSNSLLNEIELLLIYDTVFTKLGMEGYEVRI 178

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
             NNRKIL  + E +G            +  +IDKLDK G+ GVK  L E          
Sbjct: 179 --NNRKILGALAEIVGQPD-----LLTDITISIDKLDKIGMDGVKKELQER--------- 222

Query: 228 KGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               L+  +I  + +FL+I    E+ + +L  L + +  G KG  EL  +     +    
Sbjct: 223 ---GLSDTEITKIANFLNISGSNEEKLQQLGVLFQNSPTGLKGIEELSYVL--HTQPEAF 277

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
                +  T+ RGL YYTG + E      V          GS+GGGGRYD L   F    
Sbjct: 278 KTTPILDVTLARGLNYYTGMIVEVKAPEAVK--------MGSIGGGGRYDDLTGLFGLPG 329

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G+ R+   L+ L+      ++     +   + D+++          LR  G+
Sbjct: 330 ISGVGISFGVDRIYDVLEELQLFPATAQQGT--QVLFFNLDAETTGTAFKLVMQLRAKGV 387

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            +E+F  +SK    Q+KYA++RN P  II G  E   G++ IK++  G++    +    +
Sbjct: 388 SSELFHETSK-MDKQMKYANKRNIPYVIIMGESEVKEGLVSIKNMVTGQQEKIAMTELAN 446

Query: 466 WR 467
           ++
Sbjct: 447 YQ 448


>gi|224540623|ref|ZP_03681162.1| hypothetical protein BACCELL_05537 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517762|gb|EEF86867.1| hypothetical protein BACCELL_05537 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 454

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 153/505 (30%), Positives = 226/505 (44%), Gaps = 79/505 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPAMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGLTDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS   E+ +  L E++ G+  G+KG  E   I + +   
Sbjct: 227 ------GISDEAIAKLQPIILLSGTNEEKLATLKEVLAGSEIGQKGVEESEFILKTLSAF 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNELELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  L+           +L         + S        +R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLDLYPKEAVNSTQLLFINFGEKEAAFS--LNVLAQVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            GIRAE+F  SSK    Q+ YA+ +N P   + G  E +   + +K++  G++       
Sbjct: 389 EGIRAEIFPDSSK-MKKQMGYANAKNIPFVALVGENEMNENKVTLKNMETGEQT------ 441

Query: 463 NESWREARVAQITIPISELVSTVKK 487
                        +   EL+ T+KK
Sbjct: 442 ------------LVSAEELIQTLKK 454


>gi|322378041|ref|ZP_08052528.1| histidine--tRNA ligase [Streptococcus sp. M334]
 gi|321281023|gb|EFX58036.1| histidine--tRNA ligase [Streptococcus sp. M334]
          Length = 426

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 101/461 (21%), Positives = 178/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +      +  V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVALPIENSLD-VYIAVLGEGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|52081235|ref|YP_080026.1| histidyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786615|ref|YP_092444.1| histidyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319644798|ref|ZP_07999031.1| histidyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81690957|sp|Q65GR3|SYH_BACLD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|52004446|gb|AAU24388.1| histidyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349117|gb|AAU41751.1| HisS [Bacillus licheniformis ATCC 14580]
 gi|317392607|gb|EFV73401.1| histidyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 424

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 99/466 (21%), Positives = 176/466 (37%), Gaps = 51/466 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E      +    R     Y +  I TP+ E+++   + + +  D 
Sbjct: 1   MGFNIPRGTQDILPGESERWQYVEKIARETCHAYQYKEIRTPIFEHTELFSRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV--FPCRTYRIGPVFRNEKHGPG 123
             K +++  D  G+ ++LR + TA   R   EN        P + Y IGP+FR E+   G
Sbjct: 61  VQKEMYTFADKKGRSLTLRPEGTASAVRSFVENKLFANPVQPTKLYYIGPMFRYERPQTG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           R+RQF Q  ++ +GS+    DAE+  +        G+      I     K       E +
Sbjct: 121 RYRQFYQFGIEAIGSNDPAIDAEVIALAMSVYRKAGLSNLKLVINSLGDKESRTAHREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + +++E        D   +     +++L  +   D+            +    ++ 
Sbjct: 181 IRHFEPRIDEF-----CSDCQKRLRQNPLRILDCKKDRDHE---------LLKTAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ + +    ++ + +       +    L                       VRGL+YY
Sbjct: 227 YLNEESKAYFAKVQQYLTDIGIAFEVDPNL-----------------------VRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +                ++ GGGRYDGL   F G   P  GF++ I RL+ AL
Sbjct: 264 NHTAFEIMSNAEGF------GAITTLAGGGRYDGLTEEFGGPKAPGIGFAMSIERLLAAL 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +        + +   ++T  D   D           LR AGI AE+     K    Q K
Sbjct: 318 DAENVKVGADEGIDCYIVTLGDKAKD---YSVSLLYKLREAGISAEIDY-EQKKMKGQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            ADR N     + G  E ++  + +KD   G + +  + +   + +
Sbjct: 374 SADRLNAKYIAVLGEDELNQNQINVKDGKTGDQQAIGLDDFIRFLK 419


>gi|50122141|ref|YP_051308.1| histidyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81693156|sp|Q6D277|SYH_ERWCT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|49612667|emb|CAG76117.1| histidyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 424

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 101/473 (21%), Positives = 187/473 (39%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  RI +S++ +   YG++ I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPAETALWQRIENSLKQVLSGYGYNEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGDSLTLRPEGTAGCVRAGIEHGILYNQEQRLWYVGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ +M A     +GI  +     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGCEVFGLQGPDIDAELILMTARWWRILGIADHVKLELNSIGSLDARAR 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D+L+E        D L +     +++L  +              +  
Sbjct: 177 YREALVAFLEQHKDQLDE--------DCLRRMYTNPLRVLDTKN---------PQIQVLL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               ++  +L  +       L EL+  +                            ++  
Sbjct: 220 NDAPVLTDYLDDESRAHFETLGELLTQS-----------------------GIPYTVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDG+V +  G   PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTTS--------LGAQGTVCAGGRYDGMVEQLGGHATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++S+     + K    V    +   + +        + LR A   ++     G
Sbjct: 309 LERLVLLVQSVN---PDFKAQSGVDAYLISSGAGTQIAAMQLAEKLRDALPQLKLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q   AD+    +A++ G  E + G + +K+L+ G++ +    +  S
Sbjct: 366 GG-NFKKQFARADKWGARVALVLGENEVAAGQVVVKNLSNGEQDTLAQADVAS 417


>gi|28897383|ref|NP_796988.1| histidyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838540|ref|ZP_01991207.1| histidyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260363552|ref|ZP_05776381.1| histidine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876342|ref|ZP_05888697.1| histidine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898613|ref|ZP_05907109.1| histidine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260899287|ref|ZP_05907682.1| histidine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|31077001|sp|Q87S15|SYH_VIBPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|28805595|dbj|BAC58872.1| histidyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149748055|gb|EDM58914.1| histidyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308086928|gb|EFO36623.1| histidine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093021|gb|EFO42716.1| histidine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308106609|gb|EFO44149.1| histidine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308113026|gb|EFO50566.1| histidine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328472595|gb|EGF43458.1| histidyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 422

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 107/481 (22%), Positives = 189/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++ ++++N+   YG++ +  P++E ++   + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKLENTVKNVISAYGYNEVRMPIVEETNLFSRAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEETDVVSKEMYTFDDRNGDSLTLRPEGTAGCVRSCIQNSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G +    DAE+ MM A     +G                   +
Sbjct: 117 PQKGRYRQFHQCGVEVFGLNGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSQEDRAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALVAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKN---------PDI 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L EL+            L                  
Sbjct: 216 QAILGDAPRLSEYLGEESKAHFAGLCELLDAAGIEYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE +         V +  +     ++       + LR A  G+R  
Sbjct: 305 FAMGLERLVLMLETLELTDVRRS----VDVYVVTAGEGTMMAGMKLAEQLREAISGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q K AD+    +A++ G  E +   + +KDL  G++ +           
Sbjct: 360 MNHFGGGNFKKQFKRADKVGAVVALVLGENEVADNTVVLKDLVGGEQETYNQAEVAEKIA 419

Query: 469 A 469
           A
Sbjct: 420 A 420


>gi|313675615|ref|YP_004053611.1| histidyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312942313|gb|ADR21503.1| histidyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 462

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 152/486 (31%), Positives = 237/486 (48%), Gaps = 55/486 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKF 59
           M K    +  +P+G  D    E+  R+ ILD+I+ +Y+ YG+ PIETP +E    L GK+
Sbjct: 1   MSKN---KPSIPKGTRDFGPAEMAKRHFILDTIKKVYQKYGYAPIETPAMENLSVLQGKY 57

Query: 60  LPDED-----RPNKGVF-SLQDDDGQ-----------WISLRYDLTAPLARYVAENFDTI 102
             + D       N G F S  D+  +              LRYDLT P AR+V  +   +
Sbjct: 58  GDEGDQLLFKILNSGDFLSKTDESDRSDSKALQPKISEKGLRYDLTVPFARFVVMHQHNL 117

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
            FP + Y+I PV+R ++   GR+R+F QCD D +G+++   +AE+ +M+ +  +++  K+
Sbjct: 118 TFPFKRYQIQPVWRADRPQKGRYREFYQCDADAIGTNSMLCEAEIVLMIQEVFKSLQTKK 177

Query: 163 N---DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
               DY I INNRKIL GI+E +G  G +          AIDKLDK G   VK  L E  
Sbjct: 178 ANSLDYAIKINNRKILSGIVEVMGAEGKE-----TDFAVAIDKLDKIGEDKVKEELLER- 231

Query: 220 TDNSGDFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
                            ID +     LS D  + ++ L + +K +  G+KG  EL  + +
Sbjct: 232 -----------GFNQSSIDTLSPLFTLSGDNTEQLNFLKDFLKNSEKGQKGLEELNEVFD 280

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
           ++   G    ++++  T+ RGL YYTG ++E          K K V  GS+ GGGRYDGL
Sbjct: 281 ILDSFGAKVPQLELDVTLARGLSYYTGAIFEV---------KPKNVEMGSICGGGRYDGL 331

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
              F   +V   G S G+ R+   L+ L+    N +      +  +  D +S        
Sbjct: 332 TDTFGLPDVSGVGISFGVDRIYDVLEELDLYPENAESST--EVLMVSFDEESWKYSLKVL 389

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             LRTA ++AE++    K    Q+KYA+ +  P  I+ G+ E   G L  K++ +G + S
Sbjct: 390 HRLRTANVKAELYPEPVK-LKKQMKYANDKQIPFVILVGSEEMKTGDLTFKNMKEGTQES 448

Query: 458 REIKNN 463
              ++ 
Sbjct: 449 LNAESI 454


>gi|218508905|ref|ZP_03506783.1| histidyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 437

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 257/430 (59%), Positives = 305/430 (70%), Gaps = 9/430 (2%)

Query: 71  FSLQDDDG--QWISLRYDL--TAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           FS+QDDD      +LR D     P    ++     +  P        VFRNEK GPGRFR
Sbjct: 4   FSVQDDDEAVDVGALRPDGAARPPCRPRISTRSSCLTAPIAPGY---VFRNEKPGPGRFR 60

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF+Q D D VG+    ADAEMCMMMADTLEA+GIKR DY I +NNRK+LDG+LE IGL G
Sbjct: 61  QFMQFDADTVGAPGVQADAEMCMMMADTLEALGIKRGDYVIRVNNRKVLDGVLEAIGLGG 120

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           DDK  +RL VLRAIDKLDKFG +GV LLLG GR D SGDFTKGA L   QID ++ F+ I
Sbjct: 121 DDKAGQRLNVLRAIDKLDKFGSEGVALLLGPGRKDESGDFTKGAGLDQAQIDKVLFFVGI 180

Query: 247 -DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D  +S   L ELV GT  G +G  EL  I  LV  +GY S+RIKI  ++VRGLEYYTG 
Sbjct: 181 KDYAESAARLAELVAGTSKGGEGVEELNFIGALVASAGYQSDRIKIDPSVVRGLEYYTGP 240

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           VYEA L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ ALK+L
Sbjct: 241 VYEAELLFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQAVPATGFSIGVSRLMTALKNL 300

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                + + + PVL+T MD D +++ +YQ  TQ LR AGIRAEMF G+ K FGNQLKYAD
Sbjct: 301 GKLGAS-EVIEPVLVTVMDGDVEAMGRYQKMTQALRAAGIRAEMFQGNWKKFGNQLKYAD 359

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           RR CP+AIIQG  ER+ G++QIKDL +GK LS EI++N SWREARVAQ T+P ++LV+ V
Sbjct: 360 RRGCPVAIIQGGDERATGVVQIKDLIEGKRLSGEIEDNASWREARVAQETVPEADLVAKV 419

Query: 486 KKILQENKEE 495
           K+IL    E+
Sbjct: 420 KEILAAQAED 429


>gi|254228665|ref|ZP_04922089.1| histidyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262395117|ref|YP_003286971.1| histidyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151938844|gb|EDN57678.1| histidyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338711|gb|ACY52506.1| histidyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 422

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 107/481 (22%), Positives = 190/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++ ++++N+   YG++ +  P++E ++   + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKLENTVKNVISAYGYNEVRMPIVEETNLFSRAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEETDVVSKEMYTFDDRNGDSLTLRPEGTAGCVRSCIQNSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G +    DAE+ MM A     +G                   +
Sbjct: 117 PQKGRYRQFHQCGVEVFGLNGPDVDAELIMMTARLWRELGINEHVRLELNSIGSQEDRAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALVAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L EL+            L                  
Sbjct: 216 QAILGDAPRLSEYLGEESKAHFAGLCELLDAAGIEYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE +         V +  +     ++       + LR +  G+R  
Sbjct: 305 FAMGLERLVLMLETLELTDVRRS----VDVYVVTAGEGTMMAGMKLAEQLRESIPGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q K AD+    +A++ G  E +   + +KDLA G++ +           
Sbjct: 360 MNHFGGGNFKKQFKRADKVGAVIALVLGENEVADNTVVLKDLAGGEQETYNQAEVAEKIA 419

Query: 469 A 469
           A
Sbjct: 420 A 420


>gi|238752474|ref|ZP_04613950.1| Histidyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238709323|gb|EEQ01565.1| Histidyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 424

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 102/477 (21%), Positives = 184/477 (38%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAIWQRIEGILKQVLAGYGYSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ ++ A    A+G                   +
Sbjct: 117 PQKGRYRQFHQMGVEVFGLQGPDIDAELILLSARWWRALGISEHVKLELNSIGSLDARAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YREALVAFLEQHVEVLDE------------DCKRRMYSNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L       +  +L  + ++    L EL+                          S    
Sbjct: 216 QLLLNDAPKLSDYLDEESKQHFAGLCELLD-----------------------QASIPYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 253 VNERLVRGLDYYNRTVFEWVTSS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAE 408
           F++G+ RL++ ++++       K    V +  +     + S      + LR   A ++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFKVPATVDVYLISSGEGTQSAAMQLAEHLRDELATLKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              G   NF  Q+  AD+    +A+I G  E +   + +KDL  G++ +    +  +
Sbjct: 362 TNYGGG-NFKKQITRADKWGARVALILGESEVAAQQVVVKDLRNGEQETLAQADVAA 417


>gi|270264728|ref|ZP_06192993.1| histidyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270041411|gb|EFA14510.1| histidyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 424

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 100/476 (21%), Positives = 183/476 (38%), Gaps = 72/476 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +  RI  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPEDTALWQRIEGTLKQVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ ++ A   +A+G                   N
Sbjct: 117 PQKGRYRQFNQLGVEVFGLQGPDIDAELILLTARWWKALGISEHVNLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +     +       
Sbjct: 177 YRDALVAFLEQHKDTLDE------------DCKRRMYSNPLRVLDSKNPEVQA------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + +     L EL+            L                  
Sbjct: 218 --LLNDAPRLSEYLDEESKAHFDGLCELLSQAGIPYTINERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTTS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAE 408
           F++G+ RL++ ++ +     + K    + +  +   + + S      + +R A   ++  
Sbjct: 305 FAMGLERLVLLVQEVN---PDFKAPATIDVYVISSGAGAQSAAMQLAENVRDAAPQLKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              G   NF  Q+  AD+    +A+I G  E +   + +KDL  G++ +       
Sbjct: 362 TNYGGG-NFKKQITRADKWGARVALILGENEVAAQQVVVKDLRSGEQETLAQSEVA 416


>gi|326201903|ref|ZP_08191773.1| histidyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987698|gb|EGD48524.1| histidyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 442

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 137/475 (28%), Positives = 222/475 (46%), Gaps = 37/475 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKF 59
           M K+  +   +  GF +    +  + N +LD+I+  YE YGF P++TP++E S+  L K 
Sbjct: 1   MAKEV-ITPSILPGFMELLPADQIVFNNMLDTIKKTYEKYGFIPLDTPMIEKSEVLLAKS 59

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             +     K V+         +SLR+DLT PLARYV+++F  + FP + Y IG VFR EK
Sbjct: 60  GGET---EKQVYRFN-KGDNDLSLRFDLTVPLARYVSQHFGDLTFPFKRYHIGKVFRGEK 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GRFR+F QCD+D +G+   +   +  ++         +  +D+ I INNRK+L+G  
Sbjct: 116 PQKGRFREFYQCDIDIIGNENLSVINDAEILSVIYSTFKALGFDDFTIRINNRKVLNGFF 175

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E + +    ++      LR IDKL+K G + V   L                L+ E    
Sbjct: 176 EGLQVSDKTEV------LRTIDKLEKIGNEAVLKELE------------AIGLSKENSQR 217

Query: 240 MVSFLSID--LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
           ++ F+         +  L E+        +G +EL ++   +      S    I  TI R
Sbjct: 218 VLDFVGTKGSCRDIIKHLREMNFQNEMFNEGIDELELVVNYIDSFKVPSANYTIDLTIAR 277

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYTG +YE +L         +    GSV  GGRYD L  ++  + +P  G SIG+SR
Sbjct: 278 GLDYYTGTIYETVLN--------RYPSIGSVCSGGRYDNLAQKYTTKKLPGVGISIGLSR 329

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L   L+        +K   P  I  +  +  ++         +R  G+ AE++    K  
Sbjct: 330 LFYQLREAGI-LGEMKRATPSEILVIPMNG-TMGNALEIATKIRDEGVSAEIYFNEGK-I 386

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           G +  YAD+   P  I+ G  E   G+ ++KD+A G++    ++      +A+  
Sbjct: 387 GKKFSYADKLGIPYVIVVGEDEVKSGIFKLKDMATGEQADLSVEQIIEKLKAQDN 441


>gi|240102364|ref|YP_002958672.1| histidyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239909917|gb|ACS32808.1| Histidyl-tRNA synthetase (hisS) [Thermococcus gammatolerans EJ3]
          Length = 435

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 120/456 (26%), Positives = 205/456 (44%), Gaps = 34/456 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E  +G  D   +E+  R  + + IR ++E Y F  + TP  EY++       +E   
Sbjct: 1   MKVERVKGTRDFLPEEMAKRRWVFERIREVFERYNFHEVLTPTFEYTELFKLRSGEE--V 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D  G+ ISLR D+T+ +AR     F T   P + Y I  +FR E+   GRFR
Sbjct: 59  VKQLYAFLDKGGRDISLRPDMTSSVARLYVSAFQTAPKPIKWYYIANMFRYEEPQSGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +GS    ADAE+  +  ++  A G+   D+ + I +R +LD   + +G+  
Sbjct: 119 EFWQAGVELIGSDKVEADAEVIALFTESYLATGL--EDFTVNIGDRVLLDEFAKMLGVKD 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D      + ++R IDK DK   +     L +              L+ E ++ ++S + I
Sbjct: 177 D------IGLMRLIDKKDKLTQEEFVKALKDF------------GLSDEDVEKVLSLVEI 218

Query: 247 DLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             E   +    E +  +   +     L  + +L+   G +   I+I   I RG +YYT  
Sbjct: 219 KGEPDEVLPKAEELFTSEKAKAEIRRLYELVDLLDAYGVSK-WIRIDLGIARGFDYYTSV 277

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+EAI    +                 RYD L+  F G+  PATGF+IGI RLI  L+  
Sbjct: 278 VFEAIAPNDLGIGSIGGGG--------RYDNLIEVFGGKPTPATGFAIGIERLIPILEWK 329

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                       V +  +  D +           LR AG++A++ L + +     L +A 
Sbjct: 330 GLIPEIRLRPD-VYVIPIGKDVELRKTAVEVVSALRRAGVKADVEL-TGRKLRKALDHAG 387

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           R N P  ++ G  +   G + I+D+  G++   + +
Sbjct: 388 RLNVPYVVLIGKRDLENGNVTIRDMETGEQRVVKKE 423


>gi|120435468|ref|YP_861154.1| histidyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|166980048|sp|A0M0E2|SYH_GRAFK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|117577618|emb|CAL66087.1| histidyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 456

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 139/481 (28%), Positives = 227/481 (47%), Gaps = 58/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I ++I+  ++ +GF PIETP  E S +L GK+  + DR 
Sbjct: 4   KPSIPKGTRDFSPEEVAKRNYIFNTIQTEFKGFGFQPIETPSFENSSTLMGKYGDEGDRL 63

Query: 67  NKGVFSLQDDDG----------------------QWISLRYDLTAPLARYVAENFDTIVF 104
              +F + +                            +LRYDLT P ARYV ++ + I F
Sbjct: 64  ---IFKILNSGDFLKKADKDALANSDSLKLTSSISEKALRYDLTVPFARYVVQHQNEIEF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GRFR+F QCD D VGS++   + E   +       +G++   
Sbjct: 121 PFKRYQIQPVWRADRPQKGRFREFFQCDADVVGSNSLWQEVEFVQLYDAVFNKLGLEG-- 178

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRK+L G  E IG    DKL +  + L   DKLDK G +GVK  + E       
Sbjct: 179 VTIKINNRKVLSGFAEVIG--EQDKLIDFTVAL---DKLDKIGEEGVKKEMREK------ 227

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E ++ +    +++    + +  L  +++G+  G+KG  EL  I   + + 
Sbjct: 228 ------GISEEALNKIQPIFNLNGNFAEKIEGLKTILEGSETGQKGIEELQFIQNAIEEM 281

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
             +  ++ +  T+ RGL YYTG ++E      V          GS+GGGGRYD L   F 
Sbjct: 282 PLSVAKLDLDVTLARGLNYYTGAIFEVAAPENVK--------MGSIGGGGRYDDLTGIFG 333

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            +++   G S G+ R+ + L+ L      + E   VL                  + LR 
Sbjct: 334 LKDMSGIGISFGLDRIYLVLEELGLFPATVTENTKVLFINFGEKEAL--YAMKAVKRLRE 391

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             I AE++  S+K  G Q+KYAD+R+ P  ++ G  E +     +K +  G++ + +   
Sbjct: 392 ENIIAELYPDSAK-MGKQMKYADKRSIPYVVLAGEEEINDKKFTLKHMKSGEQSNLDFNG 450

Query: 463 N 463
            
Sbjct: 451 L 451


>gi|313637739|gb|EFS03099.1| histidyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 427

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 103/464 (22%), Positives = 189/464 (40%), Gaps = 59/464 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +LPRG  D   +E+   + +  +   + ENY ++ I TP+ E+++   + + D  D  +K
Sbjct: 2   QLPRGTRDILPEEVTKWHFLEAAFAAVCENYQYEEIRTPIFEHTELFERGVGDSTDIVSK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRFR 126
            +++ QD  G+ ++LR + TA + R   E+        P +     P+FR E+   GR R
Sbjct: 62  EMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGAVSQPIKXXXNEPMFRYERPQGGRQR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-----NNRKILDGILEK 181
           QF Q  ++ +GS     D E+  +  +  + +G++     I       +  K  + ++  
Sbjct: 122 QFTQMGIEAIGSDDPAIDVEVISLAVEFFKRIGLRNIKLVINSLGDKESRLKHREALVSH 181

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
              H D+   E  + L             +++L  +   D         N   +    ++
Sbjct: 182 FEPHIDEFCAECQVRLH---------KNPLRILDCKKDHD---------NPLIQTAPSIL 223

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L+ +     +++   +                              +I  T+VRGL+Y
Sbjct: 224 DYLNEESVAYFNQVQSYLNALE-----------------------ISFEIDPTMVRGLDY 260

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++A
Sbjct: 261 YNHTTFEIMSEEEGFGAK------TTLCGGGRYHGLVKEFGGPDTPGIGFGIGVERILLA 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+  +     I    P+ +  +    ++  K       LR  GI AE      +    QL
Sbjct: 315 LEKADV---KIPAKKPLEVYVITAQPEAELKAVTLVNKLRKNGISAEKDY-LKRKLKAQL 370

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           K A+R+N    II G  E   G  Q+K++  G++        E+
Sbjct: 371 KDANRKNAVYTIILGEEELQTGNYQLKNMETGEQEIVFEDTLET 414


>gi|238926285|ref|ZP_04658045.1| histidine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885965|gb|EEQ49603.1| histidine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 421

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 92/462 (19%), Positives = 172/462 (37%), Gaps = 52/462 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D     +     +   IR++   YG+  I TP+ E+++   + + D  D 
Sbjct: 1   MLTNAPRGTKDILPDAVGAWTHVEHVIRDLCARYGYGEIRTPMFEHTELFQRGIGDGTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGR 124
            +K +++  D   + ++LR + TA   R   +N         + + IG +FR ++   GR
Sbjct: 61  VDKEMYTFSDRGDRSLTLRPENTASAVRAYLQNKLYADGGLQKLFYIGSMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLE-AVGIKRNDYHIGINNRKILDGILEKIG 183
            R+F Q  V+ +G  +   DAE+ ++  D L              +          E++ 
Sbjct: 121 MREFHQFGVEALGEESPALDAEVILLAYDFLTVLGLTGLTLKLNSVGCPACRPVYRERLQ 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  + L          D  D++    +++L  + + D    F  GA         +   
Sbjct: 181 AYFKEYL-----PTLCDDCKDRYTRSPLRIL--DCKRDAEQPFMAGA-------PAITDC 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L     +   ++ + +       +    L                       VRGL+YYT
Sbjct: 227 LCPACTEHFEQVQQHLTAAGVSYELDPRL-----------------------VRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E                  +V GGGRYDGLV    G   PA GF+ G+ R+++AL+
Sbjct: 264 RTAFEIAYP--------PLGAQSAVAGGGRYDGLVEELGGNPTPAVGFAAGLERVLLALE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +  +     +          LR  G+RA M   + ++   Q+K 
Sbjct: 316 QQNLLPVQPPAAD---VFLIALGDAAAKAAFPLLHELRHGGVRALMDY-AGRSMKAQMKQ 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A+R     A+I G  E +     ++D+A+  + +  + +   
Sbjct: 372 ANRSGARYAVILGEDELAAHTALVRDMAESAQETCALDDLVE 413


>gi|90410874|ref|ZP_01218888.1| histidyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90328087|gb|EAS44398.1| histidyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 422

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 109/474 (22%), Positives = 191/474 (40%), Gaps = 59/474 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   +  +  ++  +I+ +   YG++ I  P++E +    + +
Sbjct: 1   MAKQ----IQAIRGMNDCLPTQSPLWQKVEGTIKQVVSAYGYNEIRMPIVESTHLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +   ++LR + TA   R   +N        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNCDSLTLRPEGTAGCVRAGIQNGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI- 178
              GR+RQF Q  V+  G +    DAE+ MM A     +GI +       + R  L+ I 
Sbjct: 117 PQKGRYRQFHQVGVEVFGLNGPDVDAELIMMTARLWRELGINQ-------HVRLELNSIG 169

Query: 179 -LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE    + +  +      L  +D+  K  +    L + + +     +    A       
Sbjct: 170 SLEARATYREALIAFLEQHLDVLDEDCKRRMHTNPLRVLDTKNPAVQEILVDA------- 222

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  +L  D +     L EL+       +    L                       VR
Sbjct: 223 PKLSEYLDDDSKAHFAGLCELLDAAGIEYQVNERL-----------------------VR 259

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA GF++G+ R
Sbjct: 260 GLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPAVGFAMGVER 311

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           L++ +++LE +         V    +     ++       + LR    G+R  M      
Sbjct: 312 LVLLMETLELADVRRS----VDAYVVTVGEGTMMAGMKLAEKLRENVPGLRV-MNHFGGG 366

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           NF  Q K AD     +A++ G  E +   + +KDL  G++ +       +    
Sbjct: 367 NFKKQFKRADNVGAAIALVLGENEIADNTVVVKDLRGGEQTTMAQDEVAAKLAE 420


>gi|282850506|ref|ZP_06259885.1| histidine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579999|gb|EFB85403.1| histidine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 423

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 103/467 (22%), Positives = 180/467 (38%), Gaps = 60/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D   +++   + I   +R I + YGF+ I TP  E +    + + +  D 
Sbjct: 1   MAIRKPRGTQDFLPEQMIHWHYIEQRMREICKVYGFNEIRTPAFEETKLFLRGIGETTDV 60

Query: 66  PNKGVFSLQ--DDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGP 122
             K +++    DD G   +LR + TA   R   EN         + Y +GP+FR++K   
Sbjct: 61  VQKEMYTFTTGDDGGSSFTLRPENTASAVRAYLENKVYGKEGLTKWYYMGPMFRHDKPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR+RQF Q   + +GS +   D+E+  M+   L+  G+K      +       R +    
Sbjct: 121 GRYRQFHQFGAEVLGSQSPVVDSEVICMVVQLLKDFGLKDLNVEVNSVGCPTCRPVYREK 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        ++L          D  ++     +++L  + + +     + GA    E + 
Sbjct: 181 LIAFFEPKKEQL--------CSDCQERLYKNPLRIL--DCKNETCKSLSVGAPEIHEHL- 229

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                                      E+  +    +   +      + +  ++  +VRG
Sbjct: 230 --------------------------CEECHDHFEELKTYLTA---ANVQYTLNPRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E                  +V GGGRYDGLV    G + PA GF++G+ RL
Sbjct: 261 LDYYTKTAFEVQYT--------PLGAQSAVAGGGRYDGLVEELDGPHTPAIGFAMGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL+          E     +  +     +  +     Q L    I  EM  G  K+  
Sbjct: 313 LLALEKQNLLPEPTVEPS---VFVVALGDAAKVEAFKICQALHDEYITVEMD-GQGKSMK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            QLKYA++ N    II G  E  R    I+ +   ++ +  +     
Sbjct: 369 AQLKYANKINAKYVIILGDDELVRKEAIIRFMDTSEQETVSLNIVAE 415


>gi|209881101|ref|XP_002141989.1| histidyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209557595|gb|EEA07640.1| histidyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 977

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 135/505 (26%), Positives = 234/505 (46%), Gaps = 54/505 (10%)

Query: 1   MGKKTKL--RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M  + ++  + ++P+G  D P +++ IRN I D+IR+I+ ++G   I+TP+ E  D+L  
Sbjct: 494 MTTQNQIQRKPKVPKGTQDIPPQKMVIRNVIFDTIRSIFRSHGAVEIDTPIFELRDTLIG 553

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ L+D  G+ +SLRYDLT PLARY+A          + ++IG V+R +
Sbjct: 554 KYGED---SKLIYDLKDQGGEQLSLRYDLTVPLARYIASAGLEN---LKRFQIGKVYRRD 607

Query: 119 KHG--PGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           +     GR+R+F QCD+D      A T D E+  +  D L A       + I IN+R +L
Sbjct: 608 EPQMSRGRYREFYQCDLDICGIYEAMTTDVEILKIATDILNAFSPWIGSFIIKINHRSLL 667

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           DG+L   G+       +   +  +IDKLDK   + VK            +      L+ E
Sbjct: 668 DGLLIVCGVP----KAKIRTICSSIDKLDKESWESVKK-----------EMVTLKGLSEE 712

Query: 236 QIDIMVSFLSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
             D + +++          +  +  E +      +   +++V++       G     +  
Sbjct: 713 VADKIGNYIKFSGAPGEVLTKVKQCEELINNEDIKLAISDMVLLFSYTDAVGCTE-HLSF 771

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             ++ RGL+YYTG +YEA+L              GS+  GGRYD L+  F  +N+PA GF
Sbjct: 772 DLSLARGLDYYTGIIYEAVLTS---------GNVGSIAAGGRYDNLIGMFSQKNIPAVGF 822

Query: 352 SIGISRLIVALKSL-----ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           S+G+ R++  ++          +N I                 ++       ML T GI 
Sbjct: 823 SVGVERIMNIIEKKLETNTRQLSNKIIRGSFTEFLICTIGDILVTHKLKLASMLWTNGIS 882

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE+   S+     QL+YA  +  P  II G  E  R  +QI+           +  +   
Sbjct: 883 AEISPSSNAKLRKQLEYAASKQIPFCIIVGEDEVKRNTVQIR--------QVNLDTHIDK 934

Query: 467 REARVAQITIPISELVSTVKKILQE 491
            + R+++  + ++ L+S VK I+ +
Sbjct: 935 SQVRISE-EVSLNSLISRVKDIISK 958


>gi|168486226|ref|ZP_02710734.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570682|gb|EDT91210.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 429

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 180/461 (39%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E  +M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNSATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVESAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|292489046|ref|YP_003531933.1| histidyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|291554480|emb|CBA22007.1| Histidyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 450

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 102/467 (21%), Positives = 174/467 (37%), Gaps = 68/467 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    E  +  R+   ++ +  +YGF  I  P++E +    + + +  D  
Sbjct: 29  NIQAIRGMNDYLPAETAVWQRVEQVLKQVLSSYGFSEIRVPIVEQTPLFLRAIGEVTDVV 88

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G+ +SLR + TA   R   E+        R + IGP+FR E+   GR R
Sbjct: 89  EKEMYTFDDRNGESLSLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYERPQKGRSR 148

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDG 177
           QF Q   +  G      DAE+ MM A   +A+G                   N R  L  
Sbjct: 149 QFHQIGAEVFGLQGPDIDAELIMMTARWWKALGIADHVVLELNSIGSLQARANYRDALVA 208

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE+      +            D   +     +++L  +                    
Sbjct: 209 FLEQHVEMLGE------------DCKRRMYSNPLRVLDSKN---------PDVQALLNDA 247

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  +L  +  +    L   +       +    L                       VR
Sbjct: 248 PTLGDYLDDESREHFAGLCRHLDAAGIAYRVNQRL-----------------------VR 284

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +          K    G+V  GGRYDGLV +  G   PA GF++G+ R
Sbjct: 285 GLDYYNRTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQLGGHATPAVGFAMGLER 336

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           L++ ++++       +    V +  +       S   +  + LR A   ++    LG   
Sbjct: 337 LVLLVQAVN---PEFEPTRVVDVYVIAAGQGVQSAALLLAEQLRDALPELKLMSNLGGG- 392

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           +F  Q   AD+    +A++ G  E + G L IKDL  G++ +    +
Sbjct: 393 SFKKQFARADKWGARIALVIGEDEVANGQLVIKDLRTGEQQTLAQGD 439


>gi|259907719|ref|YP_002648075.1| histidyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963341|emb|CAX54826.1| Histidyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
          Length = 425

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 102/477 (21%), Positives = 178/477 (37%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +  R+   ++ +  +YGF  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPAETAVWQRVEQILKQVLSSYGFSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ MM A   +A+G                   N
Sbjct: 117 PQKGRYRQFHQIGAEVFGLQGPDIDAELIMMTARWWKALGIADHVRLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRHALVAFLEQHVEVLDE------------DCKRRMYSNPLRMLDSKN---------PDI 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  +  +    L   +       +    L                  
Sbjct: 216 QALLNDAPTLGDYLDDESREHFAGLCRQLDAAGIAYRVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVT--------DSLGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       +    V +  +       S   +  + LR A   ++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFEPTRVVDVYVIASGQGVQSAALLLAEQLRDALPELK-L 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           M      NF  Q   AD+    +A++ G  E + G L  KDL  G++ +   ++  +
Sbjct: 361 MSNFGGGNFKKQFARADKWGARIALVLGEDEVANGQLVFKDLRNGEQQTLAQRDAAT 417


>gi|296331700|ref|ZP_06874169.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675342|ref|YP_003867014.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151295|gb|EFG92175.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413586|gb|ADM38705.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 424

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 96/461 (20%), Positives = 181/461 (39%), Gaps = 51/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E      +   +R+    Y +  I TP+ E+++   + + +  D 
Sbjct: 1   MGYSIPRGTQDILPGESDRWQFVEQIMRDTCRTYQYKEIRTPIFEHTELFARGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV--FPCRTYRIGPVFRNEKHGPG 123
             K +++ QD  G+ ++LR + TA   R   EN        P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFQDRKGRSLTLRPEGTAAAVRAFNENKLFANPVQPTKLYYVGPMFRYERPQTG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF Q  ++ +GS     DAE+  +     +  G++     I    +++      E +
Sbjct: 121 RYRQFYQFGIEAIGSKDPAIDAEVMALAMSIYQKAGLQNVKLVINSLGDQESRKSYREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + ++ E        D   +     +++L  +   D+    T            +++
Sbjct: 181 VKHFEPRIEEF-----CSDCQSRLHTNPLRILDCKKDRDHELMKT---------APSILT 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++ + +       +    L                       VRGL+YY
Sbjct: 227 YLNEESAAYFEKVKQYLNDLGISYEIDPNL-----------------------VRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +                ++ GGGRYDGLV +  G   P  GF++ I RL+ A+
Sbjct: 264 NHTAFEIMSNAEGF------GAITTLAGGGRYDGLVEQIGGPEAPGIGFAMSIERLLAAI 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            + +      + +   ++T       +          LR AGI +E+    +K    Q K
Sbjct: 318 DAEKRELPVDQGIDCYIVTL---GEKAKDYSVSLVYKLREAGISSEIDY-ENKKMKGQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            ADR N     I G  E ++  + +KD   G+++   +   
Sbjct: 374 TADRLNARFIAILGEDELAQNKINVKDAQTGEQIEVALDEF 414


>gi|15901936|ref|NP_346540.1| histidyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111656967|ref|ZP_01407778.1| hypothetical protein SpneT_02001796 [Streptococcus pneumoniae
           TIGR4]
 gi|32130139|sp|Q97NC9|SYH_STRPN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|14973634|gb|AAK76180.1| histidyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 429

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVTL-PIENALDVYIAVLGEGANI--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|66821749|ref|XP_644303.1| histidine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|74926756|sp|Q86AS6|SYHC_DICDI RecName: Full=Histidyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|60472019|gb|EAL69972.1| histidine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 481

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 140/487 (28%), Positives = 217/487 (44%), Gaps = 44/487 (9%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K++ + P+G  D   +++ IR ++ D I+ +++ +G   IETP+ E  ++L     ++ 
Sbjct: 35  NKVQLKTPKGTQDYNPRQMTIREQVFDGIKQVFKRHGAVTIETPVFELKETLTGKYGED- 93

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K ++ LQD  G+  SLRYDLT P ARYVA N    +             N     GR
Sbjct: 94  --SKLIYDLQDQGGEICSLRYDLTVPFARYVAMNGVLNIKRYHIA-RVYRRDNPIMTKGR 150

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           FR+F QCD D  G+         C++M   +    +K  D+ I +N+RK+LD I    G+
Sbjct: 151 FREFYQCDFDIAGTYDLMVPDAECLVMICEILE-QVKVGDFQIKLNHRKLLDAIFAICGV 209

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D    +   +  A+DKLDK   + V+  + E +            L     D +  F+
Sbjct: 210 PAD----KFRAICSAVDKLDKSPWEEVRKEMVEVKA-----------LDGAVADKIEKFV 254

Query: 245 SIDLE--KSMHELYE--LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           S+  E  K +  L    +  G     +  ++L  +   +   G     I    ++ RGL+
Sbjct: 255 SLKDEPIKLLQHLRATGMCDGNKDATEALSQLETLFGYLECFGVTQ-HILFDLSLARGLD 313

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +YEA+L              GS+  GGRYDGLV  +  ++VPA GFSIGI R+  
Sbjct: 314 YYTGIIYEAVLTGQDR--------VGSIAAGGRYDGLVGMYGKKDVPAVGFSIGIERIFT 365

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+      N         +  +  + D + +       L  AGI AE     +     Q
Sbjct: 366 ILEDEYKKENKKIRENATQVFVVQMEKDLIKERLAIVSELWKAGINAEFSYKVNPKLPAQ 425

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           L  AD  N PL II G  E     L +K +   K++S E  N            T+ I E
Sbjct: 426 LNTADESNIPLIIIIGKSEVETNSLSVKTMHDRKQVSIERSN-----------FTVKIKE 474

Query: 481 LVSTVKK 487
           ++ST+ K
Sbjct: 475 ILSTIPK 481


>gi|332878167|ref|ZP_08445896.1| histidine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683905|gb|EGJ56773.1| histidine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 451

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 141/476 (29%), Positives = 223/476 (46%), Gaps = 52/476 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D    E+  R  I+++IR+ +  +GF PIETP  E  D+L GK+  + D  
Sbjct: 5   KPSIPKGTRDFSPAELAKRYFIINTIRDTFSTFGFQPIETPSFENYDTLMGKYGEEGDRL 64

Query: 65  ---RPNKGVFS-------LQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCR 107
                N G F+        +  + Q ++       LRYDLT P ARYV ++   + FP +
Sbjct: 65  IFKILNSGDFTQGVKQEDWEAKNPQKLTPQISEKALRYDLTVPFARYVVQHQAELTFPFK 124

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GRFR+F QCD D VGS++   + E   +      A+ +K     I
Sbjct: 125 RYQIQPVWRADRPQKGRFREFYQCDADVVGSNSLWQEVEFVQLYDAVFTALNLKG--VTI 182

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL G  E IG    DKL +  + L   DKLDK G +GV   + E          
Sbjct: 183 KINNRKILSGFAEVIG--ESDKLIDFTVAL---DKLDKIGEEGVIKEMSER--------- 228

Query: 228 KGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               + +  I+ +     +     + +  L  ++  +  G KG  EL  + E +   G  
Sbjct: 229 ---GINAAAIEKIKPIFGLKGSFTEKLAALSAILATSEVGCKGIEELTFVGEQIAALGLQ 285

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +  + +  T+ RGL YYTG ++E              V  GS+GGGGRYD L S F  + 
Sbjct: 286 TALLDLDVTLARGLNYYTGAIFEIAAPAG--------VQMGSIGGGGRYDDLTSIFGLKG 337

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G+ R+ + ++ L      +     V I  ++  +    +     Q LR  G 
Sbjct: 338 MSGIGISFGLDRIGLVMEELNLYPETLNS--TVKILCLNFGNAEALQSMKLLQQLRKEGK 395

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +AE++  ++K    Q+ YA++R  P   I G  E  +G   +K++  G++  RE  
Sbjct: 396 KAELYPEAAK-IKKQMDYANKRGIPYVAIIGESELQKGTYILKNMLTGEQEEREFS 450


>gi|291533405|emb|CBL06518.1| histidyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 420

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 90/463 (19%), Positives = 182/463 (39%), Gaps = 58/463 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    ++     + + IR +   YG+  I TP+ E+++   + + +  D 
Sbjct: 1   MLTKAPRGTKDILPDKVGNWLYLENLIRKLCGQYGYREIRTPIFEHTELFQRGIGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGR 124
             K +++  D   + I+LR + TA   R   EN           + IG +FR ++   GR
Sbjct: 61  VEKEMYTFTDRGNRSITLRPENTAAAVRSYLENKLYADTNLCKLFYIGSMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKILDGILE 180
           +R+F Q  V+ +G +    DAE+  +    L+ +G+K      +       R +    L+
Sbjct: 121 YREFHQFGVEALGEANPAVDAEIISLAVQFLKDLGLKDIKLLLNSVGCPKCRPVYRQRLQ 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D++          D   ++    ++  L + + +   +  + A   ++ +   
Sbjct: 181 EFFKPVIDEM--------CDDCKSRYDRNPMR--LLDCKNEKCKELAQDAPAITDCL--- 227

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                                    ++  +    + E +  +G      ++   +VRGL+
Sbjct: 228 ------------------------CDECNDHFHKVQEFLTAAG---IEFELDPGLVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E                  +V GGGRYDGL+    G++ PA GF+ G+ R+++
Sbjct: 261 YYTKTAFELKYV--------PLGAQSAVLGGGRYDGLIEECGGKSTPAVGFATGLERVLL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+          +     +  +       +K       LR  G +A M   + ++   Q
Sbjct: 313 ALEMQNLLPETNYDTD---VFIVALGDTVQAKAFEILANLRRGGFKAAMDF-AGRSMKAQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +K A++ N    II G  E     + +K++ +  + +  I   
Sbjct: 369 MKQANKANAKFTIILGEDELQANSVVLKNMNESTQETISIDEL 411


>gi|322388551|ref|ZP_08062153.1| histidine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140669|gb|EFX36172.1| histidine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 425

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 98/461 (21%), Positives = 176/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+A+GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKAIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L + L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKDSL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 YLDAESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +           +    +       +   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVVLPIENALD---VYIAVLGEEVNLKALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G +++K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVKVKNNQTREEVEVPLETI 413


>gi|238788169|ref|ZP_04631964.1| Histidyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238723756|gb|EEQ15401.1| Histidyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 424

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 98/477 (20%), Positives = 181/477 (37%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAIWQRIESILKQVLAGYGYSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ ++ A    A+G                   +
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELILLSARWWRALGISEHVQLELNSIGSLDARAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YREALVTFLEQHVEVLDE------------DCKRRMYSNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L       +  +L  + ++    L EL+            L                  
Sbjct: 216 QLLLNDAPKLSDYLDEESKQHFAGLCELLDKAGIPYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTSS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++     + +    V +  +    ++ S   +  + LR A   ++  
Sbjct: 305 FAMGLERLVLLVQAVN---PDFQVPATVDVYVISSGENTQSAAMLLAEHLRDAMPTLKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              G   N   Q   AD+    +A++ G  E +   + +KDL  G++ +    +  +
Sbjct: 362 TNYGGG-NVKKQFTRADKWGARVALMLGESEVAAQKVVVKDLRNGEQETLAQADVAA 417


>gi|312879711|ref|ZP_07739511.1| histidyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783002|gb|EFQ23400.1| histidyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 419

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 96/460 (20%), Positives = 184/460 (40%), Gaps = 52/460 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D    E      +L   R++ + +G+  +  P+ E+++   + + D  D   
Sbjct: 4   IKAPRGTRDILGDESWKWAYVLKVCRDVADCFGYREVHLPVFEHTELFCRGIGDTTDVVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D  G+ I+LR +LTA + R   E+       P + +  GP+FR E+   GR+R
Sbjct: 64  KEMYTFEDRGGRSITLRPELTASMVRSYLEHDLRNQSQPAKLWSAGPMFRYERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLH 185
           QF Q DV+ +G++    D E+     +    +G+   +  +             + +  +
Sbjct: 124 QFWQVDVEALGAADPLVDVEVIGFSLELYRRLGLANLEVVVNSVGCPACRPVYRQALRGY 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + +L       R+     ++    +++L  +     +          +E    +   L 
Sbjct: 184 LEPRLPHLCESCRS-----RYDRNPLRILDCKNPECKAQ---------TEDAPEIEGSLC 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +  +    L   +    A  +    L                       VRGL+YYT  
Sbjct: 230 PECREHFAALLAGLDRLGAAVQRDKRL-----------------------VRGLDYYTKT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            YE +                +V GGGRYD L     G +VP  GF+ GI R+++ ++S 
Sbjct: 267 AYEIL--------SGDLGAQNAVCGGGRYDNLAEAIGGPHVPGVGFASGIERIVLTMESQ 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             S      +       +  + ++  +       LR AG   +M   ++++F  Q+K A 
Sbjct: 319 GRSFGEAPRLDA---FVVAAEDEARGEASRLAHQLRAAGAAVDMDY-AARSFKGQMKAAG 374

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +     A I G  E +RG++  KDL  G++     ++ +S
Sbjct: 375 QSGARYACILGGKELARGVVACKDLGTGEQEDLSREDLKS 414


>gi|307707792|ref|ZP_07644270.1| histidyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616174|gb|EFN95369.1| histidyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 426

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 103/461 (22%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLVS F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVSYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|315612039|ref|ZP_07886956.1| histidine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315841|gb|EFU63876.1| histidine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 426

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 103/459 (22%), Positives = 178/459 (38%), Gaps = 52/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GIK    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIKGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D             E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDKE---------AVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGEGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD     + I  G  E   G + +K+    +E+   + 
Sbjct: 373 SADVFAAKILITLGESEVESGQVTVKNNQTREEVQVSLD 411


>gi|89072703|ref|ZP_01159268.1| histidyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89051523|gb|EAR56977.1| histidyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 422

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 108/481 (22%), Positives = 190/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   +  +  ++  +++ +   YG++ +  P++E +    + +
Sbjct: 1   MAKQ----IQAIRGMNDCLPTQSPLWQKVEGTVKQVISAYGYNEVRMPIVESTHLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   +N        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIQNGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ MM A     +G                    
Sbjct: 117 PQKGRYRQFHQVGVEVFGLNGPDIDAELIMMTARLWRELGINEHVRLELNSIGSLEARAE 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            RK L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRKALIAFLEQHLDVLDE------------DAKRRMYTNPLRVLDTKNAAIQE------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               E    +  +L ++ ++    L EL+       +    L                  
Sbjct: 218 --ILEDAPKLSEYLDLESKEHFAGLCELLDAAGIKYQVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  P+ G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGSQGTVCGGGRYDGLVEQLGGKATPSVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +K+LE           V +  +     +L+      + LRT   G+R  
Sbjct: 305 FAMGLERLVLLMKALEQDEVRRS----VDVYMVTAGEGTLAVGMKLAEKLRTEVPGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q K AD     +A++ G  E +   + +KDL  G++ +       +   
Sbjct: 361 TNFGGG-NFKKQFKRADNVGAAVALVLGENEIAENSVVVKDLHGGEQTTIAQDEVAAKLA 419

Query: 469 A 469
           A
Sbjct: 420 A 420


>gi|168484053|ref|ZP_02709005.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172042675|gb|EDT50721.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|332198735|gb|EGJ12817.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 429

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 180/461 (39%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E  +M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|222151515|ref|YP_002560671.1| histidyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254782335|sp|B9E707|SYH_MACCJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|222120640|dbj|BAH17975.1| histidyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 420

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 196/468 (41%), Gaps = 52/468 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF-LPDEDR 65
           +   +PRG  D    E      +   + NI  NY +  I TP+ E +D   +      D 
Sbjct: 1   MMINIPRGTQDILPAETAKWRYVESKLHNIAANYNYKEIRTPMFESTDLFARGVGGSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D   + ++LR + TA + R   EN        P + Y  GP+FR E+   G
Sbjct: 61  VQKEMYTFKDKGDRSLTLRPEGTAAVVRSYIENKMNGDANQPVKLYYNGPMFRYERKQKG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKI 182
           R+RQF+Q  V+ +GS     DAE+  M+ +  ++ G+K     +  I +    +   + +
Sbjct: 121 RYRQFVQFGVEAIGSENPAIDAEVIHMVYNIYKSFGLKHIKIVLNSIGDMDSREEYKQAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  +N         D  ++     +++L  +   +           T +    +  
Sbjct: 181 IEHFEPHINNF-----CNDCKNRLHTNPMRILDCKVDHEQP---------TVKTAPKITE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+   +    E+ + +                          +      +++VRGL+YY
Sbjct: 227 YLNDYSKNYYEEVKQYLD-----------------------LLNIPYIEDASLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E       M+E +      ++ GGGRY+GL+    G      GF++ I RL++A+
Sbjct: 264 THTAFEV------MSEAEGFGAITTLCGGGRYNGLLEMLDGPKETGIGFALSIERLLLAI 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ +   +  + +   ++T      +++ +       LR AGIR +M     +    Q+K
Sbjct: 318 EAEDIQLDVEESVDIFVVTM----PETVKEAVKIVAELRNAGIRCDMDY-LGRKMKGQMK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ADR +    ++ G+ E     +QIK +  G+  + ++++  S+ +  
Sbjct: 373 QADRIHATYTVVLGSNEIETNKIQIKAMQTGESETIKLQDIASYIKGE 420


>gi|269103274|ref|ZP_06155971.1| histidyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163172|gb|EEZ41668.1| histidyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 422

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 104/481 (21%), Positives = 190/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   +  +  ++  +++ +  +YG++ +  P++E +    + +
Sbjct: 1   MAKQ----IQAIRGMNDCLPTQSPLWQKVEGTVKQVISSYGYNEVRMPIVESTHLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   +N        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSGIQNGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK---------RNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ MM A     +GI                   
Sbjct: 117 PQKGRYRQFHQFGVEVFGLNGPDIDAELIMMTARLWRELGIHEHVTLELNSIGSLEARAE 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +     +       
Sbjct: 177 YRTALIAFLEQHMEVLDE------------DAKRRMYTNPLRVLDTKNPEIQN------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D  +    L EL+       +    L                  
Sbjct: 218 --ILGDAPKLSEYLDQDSREHFAGLCELLDAAGIKYQVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVT--------DSLGAQGTVCGGGRYDGLVEQLGGKVTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++LE +         V +  +     +L+      ++LR+    +R  
Sbjct: 305 FAMGLERLVLLMETLEQTEVRRS----VDVYMVTAGEGTLAAGMKLAEVLRSQIPDLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q K AD     +A++ G  E +   + +KDL  G++++    +  +   
Sbjct: 361 THFGGG-NFKKQFKRADNVGAVVALVLGENEIAENTVVVKDLRGGEQITMNQDDVAAKLA 419

Query: 469 A 469
            
Sbjct: 420 E 420


>gi|157371843|ref|YP_001479832.1| histidyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980049|sp|A8GHW4|SYH_SERP5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|157323607|gb|ABV42704.1| histidyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 424

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 100/476 (21%), Positives = 179/476 (37%), Gaps = 72/476 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   +E  +  RI   ++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPEETALWQRIEGILKQVLSGYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ ++ A   +A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELILLSARWWKALGISEHVKLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +     +       
Sbjct: 177 YRDALVAFLEQHQEKLDE------------DCKRRMYSNPLRVLDSKNPEVQA------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D +     L EL+            L                  
Sbjct: 218 --LLNDAPRLSEYLDADSKAHFEGLCELLAQAGIPYTINERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTTS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAE 408
           F++G+ RL++ ++++       K    + +  +   + + S      + +R A   ++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFKAAATIDVYVISSGAGTQSAAMQLAERVRDAAPQLKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              G   NF  Q+  AD+    +A+I G  E +   + +KDL  G++ +       
Sbjct: 362 TNYGGG-NFKKQITRADKWGARVALILGENEVAAQQVVVKDLRSGEQETLAQSEVA 416


>gi|213963556|ref|ZP_03391809.1| histidyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953836|gb|EEB65165.1| histidyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 458

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 138/478 (28%), Positives = 226/478 (47%), Gaps = 52/478 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D    E+  RN I+++I+N +  +GF PIETP  E  ++L GK+  + D  
Sbjct: 5   KPSIPKGTRDFSPTEVAKRNFIINTIKNAFNTFGFQPIETPSFENYNTLMGKYGEEGDRL 64

Query: 65  ---RPNKGVFS-------LQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCR 107
                N G F+        +  + Q ++       LRYDLT P ARYV ++   + FP +
Sbjct: 65  IFKILNSGDFTQGVKQEDWEAKNPQKLTPQLSEKALRYDLTVPFARYVVQHQSELTFPFK 124

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GRFR+F QCD D VGS++   + E   +      A+ +K     I
Sbjct: 125 RYQIQPVWRADRPQKGRFREFYQCDADVVGSTSLWQEVEFVQLYDSVFTALNLKG--VTI 182

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL G  E IG               A+DKLDK G +GV   + E          
Sbjct: 183 KINNRKILSGFAEMIGESDK-----LTDFTVALDKLDKIGEEGVIKEMKER--------- 228

Query: 228 KGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++ E I  +    ++     + +  L E++K +  G KG  EL  I++ + + G  
Sbjct: 229 ---GISEEAIAKLQPIFALKGSFAEKLSALKEILKNSETGLKGVEELEFIAQQINQLGLQ 285

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +  + +  T+ RGL YYTG ++E              V  GS+GGGGRYD L S F  + 
Sbjct: 286 TAILDLDVTLARGLNYYTGAIFEIAAPAG--------VQMGSIGGGGRYDDLTSIFGLKG 337

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G+ R+ + ++ L     ++     V +  ++       +     + LR  G 
Sbjct: 338 MSGIGISFGLDRIGLVMEELNLFPESLNS--TVEVLCINFGDAEALQSMKLLKALRQLGK 395

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AE++  ++K    Q+ YA++RN P  +I G  E ++G   +K++ +G +    +   
Sbjct: 396 TAELYPDAAK-IKKQMDYANKRNIPYVVIIGESELAKGTFVLKNMLEGTQKECSLNEV 452


>gi|332708991|ref|ZP_08428961.1| histidyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352180|gb|EGJ31750.1| histidyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 427

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 103/475 (21%), Positives = 186/475 (39%), Gaps = 62/475 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    E+    ++    + I     +  I  P+ E ++   + + +  D   
Sbjct: 4   IQALRGTRDILPDEVGYWQQVEAIAQQILNRAAYREIRPPIFERTELFERGIGEATDVVG 63

Query: 68  KGVFSLQDDDG--QWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
           K +++  D     + ++LR + TA + R   +N         R +  GP+FR E    GR
Sbjct: 64  KEMYTFNDRATPPRSVTLRPEGTAGVVRAYIQNSLYAAGGVQRLWYTGPMFRYENPQAGR 123

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKILDGILE 180
            RQF Q  V+ +GS    ADAE+  +  D L  +G+       +      +R+     L 
Sbjct: 124 QRQFHQLGVEVIGSRDPRADAEVIAIAIDILNTLGLVNLKLDLNSVGSTEDRQQYRQALV 183

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  D+L+E        D  D+     +++L  + +              ++    +
Sbjct: 184 DYLTPYKDELDE--------DSQDRLTRNPLRILDSKDKRTQE---------IAQDAPSI 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +LS + +    ++ +L++                             +++  +VRGL+
Sbjct: 227 LDYLSSESQSHFDQVKQLLQDN-----------------------GISYQLNPRLVRGLD 263

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E I                +V GGGRYDGLV    G   PA G++IG+ RL++
Sbjct: 264 YYTHTAFEII--------SDDLGAQATVCGGGRYDGLVHELGGNKTPAVGWAIGLERLVI 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+ L++S     +        +     + ++     Q LR AG+  E+ L S   FG Q
Sbjct: 316 LLQQLQASPTLALD-----FYLVSRGEVAQAQGLKLAQQLRQAGLAVELDL-SGSAFGKQ 369

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            K ADR      ++ G  E     + +K LA G++ +    +     +    QI 
Sbjct: 370 FKRADRSGAVACLVIGDAEAQSNTVNLKWLASGEQETMTQADLLDKTDQLKGQIE 424


>gi|321312284|ref|YP_004204571.1| histidyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291485165|dbj|BAI86240.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320018558|gb|ADV93544.1| histidyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 424

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 96/461 (20%), Positives = 180/461 (39%), Gaps = 51/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E      +   +R+    Y +  I TP+ E+++   + + +  D 
Sbjct: 1   MGYNIPRGTQDILPGESDRWQYVEQIMRDTCRTYQYKEIRTPIFEHTELFARGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV--FPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA   R   EN        P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFEDRKGRSLTLRPEGTAAAVRAFNENKLFANPVQPTKLYYVGPMFRYERPQTG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF Q  ++ +GS     DAE+  +     E  G++     I    ++       E +
Sbjct: 121 RYRQFYQFGIEAIGSKDPAIDAEVMALAMSIYEKAGLENVKLVINSLGDQDSRKSYREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + ++ E        D   +     +++L  +   D+            +    +++
Sbjct: 181 VKHFEPRIEEF-----CSDCQSRLHTNPLRILDCKKDRDHE---------LMKSAPSILT 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++ + +       +    L                       VRGL+YY
Sbjct: 227 YLNEESAAYFDKVKQYLNDLGISYEIDPNL-----------------------VRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +                ++ GGGRYDGLV +  G   P  GF++ I RL+ A+
Sbjct: 264 NHTAFEIMSNAEGF------GAITTLAGGGRYDGLVEQIGGPEAPGIGFAMSIERLLAAI 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            + +      K +   ++T       +          LR AGI +E+    +K    Q K
Sbjct: 318 DAEKRELPVDKGIDCYIVTL---GEKAKDYSVSLVYKLREAGISSEIDY-ENKKMKGQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            ADR N     I G  E ++  + +KD   G+++   +   
Sbjct: 374 TADRLNARFIAILGEDELAQNKINVKDAQTGEQIEVALDEF 414


>gi|157144552|ref|YP_001451871.1| histidyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157081757|gb|ABV11435.1| hypothetical protein CKO_00272 [Citrobacter koseri ATCC BAA-895]
          Length = 414

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/462 (22%), Positives = 183/462 (39%), Gaps = 60/462 (12%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    E  I  RI  +++N+  +YG+  I  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  ++LR + TA   R   E+        R + IGP+FR+E+   GR+RQF Q  V
Sbjct: 61  EDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGLHGDD 188
           +  G      DAE+ ++ A    A+GI  +     +    ++ R      L        +
Sbjct: 121 EAFGLQGPDIDAELILLTARWWRALGIAEHVNLELNSIGSLDARANYRDALVAYLEQHKE 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           KL+E        D   +     +++L  +                      +  +L  D 
Sbjct: 181 KLDE--------DCKRRMYTNPLRVLDSKN---------PDVQALLNDAPALGDYLDDDS 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +    L +L++           L                       VRGL+YY   V+E
Sbjct: 224 REHFAGLCKLLEAAGIAYTVNQRL-----------------------VRGLDYYNRTVFE 260

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            +               G+V  GGRYDGLV +  G+  PA GF++G+ RL++ ++++   
Sbjct: 261 WVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNL- 311

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADR 426
                    V I  +   +D+ S      + LR    G++     G   NF  Q   AD+
Sbjct: 312 --EFNADPVVDIYLVASGADTQSAAMTLAERLRDENPGVKLMTNHGGG-NFKKQFARADK 368

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
               +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 369 WGARVALVLGESEVADGTVVVKDLRSGEQTAVAQDSVTAHLR 410


>gi|225861939|ref|YP_002743448.1| histidyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230974|ref|ZP_06964655.1| histidyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254103|ref|ZP_06977689.1| histidyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501624|ref|YP_003723564.1| histidine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|254782352|sp|C1CU26|SYH_STRZT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|225726465|gb|ACO22316.1| histidyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237219|gb|ADI68350.1| histidine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|327388859|gb|EGE87207.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 429

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 180/461 (39%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E  +M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|301795047|emb|CBW37512.1| histidyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 429

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 180/461 (39%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E  +M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQTLRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|307705779|ref|ZP_07642624.1| histidyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307620697|gb|EFN99788.1| histidyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 426

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/459 (22%), Positives = 179/459 (38%), Gaps = 52/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGEGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD       I  G  E   G + +K+    +E+   ++
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|120554056|ref|YP_958407.1| histidyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120323905|gb|ABM18220.1| histidyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 424

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 105/497 (21%), Positives = 199/497 (40%), Gaps = 81/497 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  +   +  ++R +   YG+  I  P++E+++   + +
Sbjct: 1   MAK-----IQAIRGMNDILPDQTPVWQYVESTVRRVLGQYGYQEIRMPVVEHTELFKRSI 55

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R +  GP+FR+E+
Sbjct: 56  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAGCVRAAEEHGLLFNQTRRLWYTGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G +    DAE+ ++ A    A+G+  +     +     ++RK+
Sbjct: 116 PQKGRYRQFHQIGVECFGMAGPDIDAELLILTARLWSALGLSDHARLEINSIGTSDSRKV 175

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL++        D   +     +++L  +     + +  +GA    
Sbjct: 176 YRQALVAYLEQYQDKLDD--------DSKRRLTTNPLRILDSKD--PATREILQGA---- 221

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +   +L  ++                               ++  
Sbjct: 222 ---PSLDDYLDDESRQHFEQLKAMLDAAGVA-----------------------YTVNPA 255

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E I               G++  GGRYDGLV +  G+   A GF++G
Sbjct: 256 LVRGLDYYGKTVFEWIT--------DSLGAQGTICAGGRYDGLVEQLGGKPTVAVGFAMG 307

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RLI+ L++LE    ++     V +T M     +++      + LR    G R  +   
Sbjct: 308 LERLILLLETLELVPEHVNNQADVYVTAMG--DQAVAPAMALAETLRNELPG-RIVVSHC 364

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              +F +Q+K ADR     A+I G  E ++    +K L                      
Sbjct: 365 GGGSFKSQMKKADRSGARFAVILGENEVAQATAGLKPLR-----------------DDQP 407

Query: 473 QITIPISELVSTVKKIL 489
           Q  I  ++L + +  +L
Sbjct: 408 QQEIAQADLAAVLAGLL 424


>gi|307243795|ref|ZP_07525926.1| histidine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492798|gb|EFM64820.1| histidine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 420

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/489 (20%), Positives = 182/489 (37%), Gaps = 75/489 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E    N + +  R++   YG++ I TP+ E+++   + + D  D 
Sbjct: 1   MLTKAPRGTKDIIPAEAYKWNYLEEKFRDLCRLYGYEEIRTPVFEHTELFKRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + ++L+ + TA + R   EN       P + + I P FR E+   GR
Sbjct: 61  VQKEMYTFKDRGDRDLTLKPEGTAGVIRAFIENKMYAETQPTKLFYITPCFRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQF Q  V+ +GS   + DAE+  +    L   G+K      +       R+  + +L+
Sbjct: 121 QRQFHQFGVEAIGSDTPSLDAEVISLAMQFLGEAGLKDLTVSINSVGCPVCREEYNRLLK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  D L +     R            ++++       +  + T  AN+    I +M
Sbjct: 181 DYLATKADVLCDLCNDRR--------DKNPMRVI-------DCKNETCQANIVD--IPLM 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L  + +    +L   +                          + +  +   IVRGL+
Sbjct: 224 ADHLCDNCKDHFKQLKAYLDE-----------------------MNIKYVVDKKIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY    +E I                +V GGGRYDGLV +  G                 
Sbjct: 261 YYKRTAFEIISND--------LGAQSTVCGGGRYDGLVEQIGG--PSGYSGIGFGLGAER 310

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L +LE++   I       I  +     +  K     + LR   I A+      ++   Q
Sbjct: 311 LLLTLEANGVEIGNPNHTDIFVVTIGDKAKLKSFSILKDLRENHISADKDH-LDRSLKAQ 369

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            KY+++ N    I+ G  E  +    +K++  G +                    I ISE
Sbjct: 370 FKYSNKINAKYTIVIGDDELDKDKATLKNMETGDQK------------------LIKISE 411

Query: 481 LVSTVKKIL 489
           LV+ ++ +L
Sbjct: 412 LVNELRSVL 420


>gi|254506761|ref|ZP_05118901.1| histidyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219550342|gb|EED27327.1| histidyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 422

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 106/472 (22%), Positives = 195/472 (41%), Gaps = 55/472 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG  DC   +  +  ++ ++++N+   YG++ +  P++E +    + +
Sbjct: 1   MAK----KIQAIRGMNDCLPTQSPLWQKLENTVKNVISAYGYNEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSCIENSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF QC V+  G      DAE+ MM A     +GI ++   + +N+   L+   
Sbjct: 117 PQKGRYRQFHQCGVEVFGLEGPDVDAELIMMTARLWRELGIDKH-VRLELNSIGSLEDRA 175

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                   + L + + +L   D   +     +++L  +                      
Sbjct: 176 N-YRTALIEFLEQHIDILD-DDCKRRMHTNPLRVLDTKN---------PDVQAILGDAPR 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +L  + ++    L EL+            L                       VRGL
Sbjct: 225 LSDYLGEESKEHFAGLCELLDAAGIEYTVNERL-----------------------VRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E I         +     G+V GGGRYDGLV +  G+  PA GF++G+ RL+
Sbjct: 262 DYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPAVGFAMGLERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + L++LE +         V +  +     ++       + LR    G+R  M      NF
Sbjct: 314 LMLETLELTDVRRS----VDVYMVTAGEGTMLAGMKLAETLREQVPGLRV-MSHFGGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             Q K AD+    +A++ G  E +   + +KDL  G + +    +  +    
Sbjct: 369 KKQFKRADKVGAAVALVLGENEVADNTVVVKDLIGGTQDTLSQADVVAKLAE 420


>gi|15903972|ref|NP_359522.1| histidyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116515787|ref|YP_817338.1| histidyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|221232832|ref|YP_002511986.1| histidyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|32130105|sp|Q8DN46|SYH_STRR6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|122277816|sp|Q04I50|SYH_STRP2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|254782348|sp|B8ZPP6|SYH_STRPJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|15459628|gb|AAL00733.1| Histidyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076363|gb|ABJ54083.1| histidyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|220675294|emb|CAR69887.1| histidyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|332198937|gb|EGJ13018.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 429

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|37525333|ref|NP_928677.1| histidyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|39932035|sp|Q7N705|SYH_PHOLL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|36784760|emb|CAE13670.1| histidine-tRNA ligase [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 425

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 110/498 (22%), Positives = 190/498 (38%), Gaps = 81/498 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI   ++ +   YG+  I TP++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTVIWQRIETILKRVLAGYGYSEIRTPIVEQTPLFRRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESVTLRPENTAGCVRAGIEHGLLYNQEQRVWYLGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ ++ A     +GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFYQLGAEVFGLQGPDIDAELILLTARWWRELGIFEHVTLELNSIGSLAARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +                 
Sbjct: 177 YREALVAFLEQHQDKLDE--------DCKRRMYSNPLRVLDSKNPEVQQ---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  + ++    L  L+ G                          + +I+  
Sbjct: 220 NDAPELCDYLDAESKEHFDGLCALLDGA-----------------------GIKYRINQR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTTA--------LGAQGTVCAGGRYDGLVEQLGGRPTPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R  + L   E +   + E     +        S     +  + +R     +R  M  G
Sbjct: 309 MER--LILLVQEINPAFVAERTVADVYLASFGEGSQQAALILAEQVRDTLPQLRLMMNHG 366

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              NF  QL  AD++   +A+I G  E   G + IKDL  G++                 
Sbjct: 367 GG-NFKKQLGRADKQGAKIALILGEDEVRSGQVAIKDLRTGEQ----------------- 408

Query: 473 QITIPISELVSTVKKILQ 490
             T+P SE+ + + ++L 
Sbjct: 409 -QTLPQSEIAARLVELLS 425


>gi|312215064|emb|CBX95017.1| similar to histidyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 524

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 138/502 (27%), Positives = 221/502 (44%), Gaps = 42/502 (8%)

Query: 1   MGKKTK----LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           MGK+ K       ++P+G  D   ++  +R+R+  ++ ++++ +G   ++TP+ E  + L
Sbjct: 54  MGKEDKSSKGFNLKVPKGTRDWTGEDAALRDRLFQTVTDVFKRHGATTLDTPVFELKEIL 113

Query: 57  GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
                ++   +K ++ LQD  G+  SLRYDLT PLAR++A N     F            
Sbjct: 114 SGKYGED---SKLIYDLQDQGGELCSLRYDLTVPLARWLAMNPSVQNFKRYQIAKVYRRD 170

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
                 GR R+F QCD D  GS          + +A  +         Y I IN+RKILD
Sbjct: 171 QPAMTKGRMREFYQCDFDIAGSYDAMIPDAEVLKIATDVFDALSW-ESYTIKINHRKILD 229

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           GI +  G+  +        +  A+DKLDK     VK  +                L S+ 
Sbjct: 230 GIFKAAGVKEE----LIRPISSAVDKLDKLPWSEVKKEME------------TKGLPSDI 273

Query: 237 IDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            D + S++       + E     E +  +    KG N++ ++   +   G    RI    
Sbjct: 274 ADKIGSWVQRKGGDDIIEFLKTEETLSRSEDVVKGVNDMELLFAYLDAFGARK-RISFDL 332

Query: 294 TIVRGLEYYTGCVYEAIL--GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           T+ RGL+YYTG +YE +     P  + KQ+ +  GSV  GGRYD LV  F G+ +P  G 
Sbjct: 333 TLARGLDYYTGVIYEVVTEGSAPRTDGKQQEIGVGSVAAGGRYDELVGMFSGKPIPCVGI 392

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMF 410
           S GI R+I  +K+   ST   K++   ++       +  L++     Q L  AGI++E  
Sbjct: 393 SFGIDRIISIMKARGQSTQRAKDVDAFVMAFGGKGFTGMLTERMQVVQELWAAGIKSEFS 452

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                    Q K AD    PLA+I G  E   G ++IK L    E               
Sbjct: 453 YKLKPKLPQQFKQADVAGVPLAVILGEEELKEGKVKIKVLGIKDE-----------NNPE 501

Query: 471 VAQITIPISELVSTVKKILQEN 492
              + +  S +V+ ++K L ++
Sbjct: 502 KDGVLVERSNMVAEIQKRLADS 523


>gi|270291756|ref|ZP_06197972.1| histidine--tRNA ligase [Streptococcus sp. M143]
 gi|270279841|gb|EFA25682.1| histidine--tRNA ligase [Streptococcus sp. M143]
          Length = 426

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 103/461 (22%), Positives = 180/461 (39%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLETLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I G    +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITGIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGQGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G +++K+    +E+   +   
Sbjct: 373 SADVFAAKTLITLGESEVESGQVKVKNNQTREEVEVTLDTI 413


>gi|307710165|ref|ZP_07646609.1| histidyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619145|gb|EFN98277.1| histidyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 426

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 103/459 (22%), Positives = 178/459 (38%), Gaps = 52/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLVS F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVSYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGQGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD       I  G  E   G + +K+    +E+   + 
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLD 411


>gi|299535679|ref|ZP_07049000.1| histidyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728879|gb|EFI69433.1| histidyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 422

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 96/464 (20%), Positives = 179/464 (38%), Gaps = 49/464 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  ++PRG  D    +     ++   IR+I   Y ++ I TP+ E +D   + + +  D 
Sbjct: 1   MSFKVPRGTQDILPGQSEKWQKVEAIIRDICRVYRYNEIRTPIFEQTDLFARGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA + R   E+        P +   +GP+FR E+   G
Sbjct: 61  VQKEMYTFEDRGGRSLTLRPENTAGVVRAYVEHKMFGAPDQPVKLSYLGPMFRYERQQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF+Q  V+ +GS+    DAE+  +  D  E+ G+K     I     K          
Sbjct: 121 RYRQFVQFGVEAIGSADPAIDAEVIALAMDVYESAGLKDLKLVINSLGDKETRDTHRTAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           L    +  E  I     D  ++     +++L  +   ++    T            +  F
Sbjct: 181 L----QHFEPHIHEFCSDCQNRLQKNPLRILDCKVDREHPLMQT---------APALTDF 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ +      ++   +       +    L                       VRGL+YY 
Sbjct: 228 LTEESAGYFTQVKSYLDTLGISYEVDPNL-----------------------VRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                ++ GGGRY+GLV    G +VP  GF++ I RL++AL+
Sbjct: 265 HTTFEIMSTASGF------GAITTLCGGGRYNGLVQEIGGPDVPGIGFALSIERLLLALE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +       +     + +  +    ++  K    T   R  G+  EM     +    Q+K 
Sbjct: 319 AEGV---ELDTASGLDVYIIAMGDEAKQKAVELTSTFRAKGLATEMDY-LDRKMKAQMKS 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           ADR      ++ G  E       +K +  G++         ++ 
Sbjct: 375 ADRLGAKYTLVLGETELEEQAAAVKHMESGEQHKVAFSELVNYL 418


>gi|300113469|ref|YP_003760044.1| histidyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539406|gb|ADJ27723.1| histidyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 423

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 112/492 (22%), Positives = 194/492 (39%), Gaps = 79/492 (16%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    +     R+ D +  +  +YG+  I  PLLE ++   + + +  D  
Sbjct: 3   KIQAIRGMNDLLPDQTPHWQRVEDVLSRVLASYGYQEIRLPLLESTELFRRSIGEVTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  ++LR + TA   R + ++        R +  GP+FR+E+   GR+R
Sbjct: 63  EKEMYTFIDRNGDSLTLRPEGTAGCVRSILQHGLLTQGSLRLWYYGPMFRHERPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGILEKI 182
           QF Q  V+ +G+     DAE+ +M A     +G++     I        R      L   
Sbjct: 123 QFYQIGVEVLGTEGPDVDAELILMTARFWRQLGLQDLHLQINSLGSPAARIAYRERLVDF 182

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
               +D L+E        D   +     +++L  +    +             +   ++ 
Sbjct: 183 FTAHEDVLDE--------DSRRRLHSNPLRILDSKNPALHE---------IIARAPRLLD 225

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  D       L   +       K    L                       VRGL+YY
Sbjct: 226 YLDDDSCAHFEALQHTLDSAGIAYKINPRL-----------------------VRGLDYY 262

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  V+E +          +    G+V  GGRYDGLV +  GQ++PA GF++G+ RL+  L
Sbjct: 263 TRTVFEWV--------SDQLGSQGTVCAGGRYDGLVEQLGGQSIPAVGFALGLERLVALL 314

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA---EMFLGSSKNFGN 419
                    +       +  +   S +  +  ++ + LR A I A   ++  G   +F +
Sbjct: 315 GEQGRLQAPLPA----DLYLVAVGSQAEQESLLFAEQLREA-IPAARLQVNHGGG-SFKS 368

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           QLK ADR     A+I G  E  +G + +KDL                   R  Q  +P  
Sbjct: 369 QLKRADRSGARWALILGEDEILQGTVSVKDLR-----------------QRKPQELVPQD 411

Query: 480 ELVSTVKKILQE 491
           +L + +K+ LQ 
Sbjct: 412 KLSAYIKQQLQS 423


>gi|94501124|ref|ZP_01307647.1| histidyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94426700|gb|EAT11685.1| histidyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 426

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 109/480 (22%), Positives = 193/480 (40%), Gaps = 65/480 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K +    +  RG  D    E ++      +++++ + +G+  I TP++E +    + +
Sbjct: 1   MAKAS---IQAIRGMNDILPGESQVWRYFESTVKSVLDGFGYQEIRTPVVEQTHLFKRSI 57

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G+ ++LR + TA   R   ++         R + +GP+FR E
Sbjct: 58  GEVTDIVEKEMYTFDDRNGESLTLRPEGTASCVRACEQHQLIANNQRQRLWYMGPMFRYE 117

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  V+  G +    DAE+ +M     + +GI+       +       R 
Sbjct: 118 RPQKGRYRQFHQIGVETFGMADPAIDAELIVMTHQLWKKLGIRDKVELELNTIGSNEARA 177

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L        D+L+E        D   +     +++L  + +   S          
Sbjct: 178 NYKAALVDYLSGVKDQLDE--------DSQRRLDTNPLRILDSKDQNTQS---------L 220

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                    +L  + E    EL  L+                              K++ 
Sbjct: 221 LNDAPNFHDYLDEESEAHFAELKALLDE-----------------------VGIEYKVNP 257

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY+  V+E I               G+V  GGRYDGLV +  G+  PA GF++
Sbjct: 258 RLVRGLDYYSKTVFEWITSE--------LGAQGTVCAGGRYDGLVEQLGGKATPAVGFAM 309

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFL 411
           G+ RLI+ L+SL    + +K    V + +M    +  +        LR A   +R +M +
Sbjct: 310 GMERLILLLESLNVIPDQVKSNIDVYLVSMG---NVTTAAMALAAQLREAVPKLRLQMHI 366

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREAR 470
           G   NF  Q+K AD      A+I G  E   G   IK L    ++++       +W + +
Sbjct: 367 GGG-NFKKQMKKADESGARFALILGEDEVKAGQASIKSLRDSAEQMTLNNDELANWLQQQ 425


>gi|27468230|ref|NP_764867.1| histidyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867126|ref|YP_188769.1| histidyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251811035|ref|ZP_04825508.1| histidyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875945|ref|ZP_06284812.1| histidine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366413|ref|ZP_06613091.1| histidine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|32130102|sp|Q8CS98|SYH_STAES RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71153564|sp|Q5HNS1|SYH_STAEQ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|27315776|gb|AAO04911.1|AE016748_145 histidyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637784|gb|AAW54572.1| histidyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805453|gb|EES58110.1| histidyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294970|gb|EFA87497.1| histidine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319447|gb|EFE59815.1| histidine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329735204|gb|EGG71496.1| histidine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737401|gb|EGG73655.1| histidine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 424

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 96/465 (20%), Positives = 188/465 (40%), Gaps = 48/465 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++      I + +  + E Y +  I TP+ E ++   + + D  D   
Sbjct: 2   IKMPRGTQDILPQDSAKWRYIENRLHTLMELYNYKEIRTPIFESTELFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + ++LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSLTLRPEGTAAVVRSYIEHKMQGEPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+ +G+   + DAE+  M+    E+ G+K    H+ +    I D    K    
Sbjct: 122 RQFNQFGVEAIGAENPSIDAEILAMVMHIYESFGLK----HLKLVINSIGDSESRKEYNE 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              K  E +I     D   +     +++L  +   D             +    +  +L+
Sbjct: 178 ALVKHFEPVIDTFCSDCQSRLHTNPMRILDCKIDRDKE---------AVKNAPRITDYLN 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D +    ++   +                          +        +VRGL+YYT  
Sbjct: 229 NDSKSYYEQVKLHLDNL-----------------------NISYVEDPNLVRGLDYYTHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E ++  P     +      ++ GGGRY+GL+    G +    GF++ I RL++AL   
Sbjct: 266 AFELMIDNP-----EYDGAITTLCGGGRYNGLLQLLDGPDETGIGFALSIERLLMALDEE 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             S +  ++     +  +    D+          LR  GI+ +     ++    Q+K AD
Sbjct: 321 GISLDVSEDFD---LFVVTMGEDADRYAVKLINDLRRNGIKVDKDY-LNRKIKGQMKQAD 376

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           R N    ++ G  E     + +K++  G+  + ++    ++ ++R
Sbjct: 377 RLNAKYTVVIGDQELENNEIGVKNMISGESENVQLDELVNYFKSR 421


>gi|289167022|ref|YP_003445289.1| histidyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288906587|emb|CBJ21420.1| histidyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 429

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 103/459 (22%), Positives = 179/459 (38%), Gaps = 52/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLVS F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVSYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD       I  G  E   G + +K+    +E+   ++
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|229525406|ref|ZP_04414811.1| histidyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229338987|gb|EEO04004.1| histidyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 422

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 185/476 (38%), Gaps = 73/476 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++   ++N+   YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K + + +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMHTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALIDYLEQYQNVLDE------------DCKRRMYTNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+                               
Sbjct: 216 QAILGDAPQLSDYLDAESKQHFAGLCELLDAA-----------------------GIEYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 253 VNQRLVRGLDYYNRTVFEWIT--------ESLGSQGTVCGGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++L ++         V +  +     ++       + LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLGNTDVRRS----VDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVM 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              G   NF  Q K AD+    +A++ G  E +   + +KDLA G++ +       
Sbjct: 361 THFGGG-NFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGEQNTVAQAEVA 415


>gi|148979608|ref|ZP_01815613.1| histidyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145961693|gb|EDK26990.1| histidyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 422

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 103/477 (21%), Positives = 187/477 (39%), Gaps = 73/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++  +++N+   +G++ +  P++E ++   + +
Sbjct: 1   MAKN----IQAIRGMNDCLPTQSPLWQKVESAVKNVVSAHGYNEVRMPIVEETNLFSRAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEETDVVSKEMYTFDDRNGDSLTLRPEGTAGCVRSCIQNSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSTEDRAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALVAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+       +    L                  
Sbjct: 216 QAILGDAPRLSEYLGEESKQHFAGLCELLDAVGIEYQVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAE 408
           F++G+ RL++ +++LE +         V +  +     ++         LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLELTEVRRS----VDVYMVAAGEGTMIAGMQLANQLRDTVEGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           M      +F  Q K AD+    +A++ G  E +   + +KDL  G++ +       +
Sbjct: 360 MSHFGGGSFKKQFKRADKVGAVVALVLGENEVADNTVVLKDLVGGEQETVSQTEVAA 416


>gi|169832457|ref|YP_001695482.1| histidyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|229558747|sp|B1I9T7|SYH_STRPI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|168994959|gb|ACA35571.1| histidyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 429

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 180/461 (39%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++  +K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVTL-PIENALDVYIAVLGEGAN--AKALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFVAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|238921038|ref|YP_002934553.1| histidyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511947|sp|C5BET0|SYH_EDWI9 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|238870607|gb|ACR70318.1| histidyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 424

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 100/479 (20%), Positives = 174/479 (36%), Gaps = 72/479 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  +   I  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTALWQPIEAALKQVLASYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G +    DAE+ MM A   + +G                    
Sbjct: 117 PQKGRYRQFHQLGAEVFGLAGPDIDAEIIMMTARWWKVLGIADHVTLELNSIGSLEARAA 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D L +     +++L  +             
Sbjct: 177 YRDALVAYLEQYKDQLDE------------DCLRRMYSNPLRVLDSKN---------PQV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  D       L  L+            L                  
Sbjct: 216 QALLNAAPRLSEYLDADSRAHFDGLCRLLDDAGIVYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV++  G    A G
Sbjct: 258 -----VRGLDYYNRTVFEWVTTS--------LGAQGTVCAGGRYDGLVAQLGGHATSAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++            V +  +     + S      + LR A   +R  
Sbjct: 305 FAMGLERLVLLVQAVN---PAFLPQRAVDVYLIAAGEGTQSAAMRLAEQLRDALPTLRLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
              G   NF  Q   AD+    +A++ G  E   G + +K LA G++ +       +  
Sbjct: 362 TNYGGG-NFKKQFARADKWGARIALVLGESEVQSGQVNVKCLASGEQQTVAQDQAATLL 419


>gi|219130142|ref|XP_002185231.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403410|gb|EEC43363.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 503

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 112/472 (23%), Positives = 198/472 (41%), Gaps = 41/472 (8%)

Query: 4   KTKLRAEL----PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           + K R +L    P+G  D   +++R+R  + D  R + +++GF   + P+LE      + 
Sbjct: 69  QQKGRPQLDTNPPKGTRDFYPQDMRLRTWLFDHWRAVAKSFGFSEYDAPVLESEALYVRK 128

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             +E      +++  D   + ++LR ++T  LAR V      +  P + Y I   +R E+
Sbjct: 129 AGEE--VTTQLYNFVDKGDRAVALRPEMTPSLARMVMAQKGGLPMPLKWYSIPQCWRYER 186

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR R+  Q ++D  G +   A+AE+   M    E VG+   D  I +N+R ++  +L
Sbjct: 187 MTRGRRREHFQWNMDVWGVAGPEAEAELMAAMVTFFENVGLTAEDVGIKVNSRLVIGEVL 246

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + +G+  +    +  +    +DKL+K  ++ ++  L E              L    ++ 
Sbjct: 247 DSLGIPEE----KFAVTCVLVDKLEKVPIEAIQGDLEE------------LGLDRSVVEK 290

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++  L+     ++              +   EL     L        N I   +++VRGL
Sbjct: 291 LLDVLTNKSLDALK------GTLGEDSQAVKELSQFMTLCEAYNI-QNWILFDASVVRGL 343

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            YYTG V+EA           +     ++ GGGRYD L+  F G   PA GF  G + ++
Sbjct: 344 AYYTGIVFEAF---------DRRGELRAIAGGGRYDKLLETFGGVQTPAAGFGFGDAVIV 394

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             LK  +       E   V       + D  +       +LR AG   ++ L   K    
Sbjct: 395 ELLKERDVLP--SFESTGVDTVVFAMNQDLYAPAVGVASVLRKAGQSVDVVL-EGKKLKW 451

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             K+ADR      ++ G  E   G + IKDL+ G + S +I +  +W     
Sbjct: 452 VFKHADRIGAKYCVVVGADEYLNGEVAIKDLSGGAQKSVKIDDLSNWVSDEQ 503


>gi|238758836|ref|ZP_04620009.1| Histidyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238702944|gb|EEP95488.1| Histidyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 424

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 101/472 (21%), Positives = 185/472 (39%), Gaps = 64/472 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  +  RI  S++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTALWQRIEGSLKQVLAGYGYSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ ++ A    A+GI  +     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELILLTARWWRALGITEHVQLELNSIGSLDARAD 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +              L  
Sbjct: 177 YREALVTFLEQHVDKLDE--------DCKRRMYSNPLRVLDSKN---------PDVQLLL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  + ++    L EL+                          S    ++  
Sbjct: 220 NDAPKLSDYLDEESKQHFAGLCELLD-----------------------QASIPYTVNER 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTNS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++       K    + +  +     + S      + +R     ++     G
Sbjct: 309 LERLVLLVQAVN---PEFKVPAIIDVYLISSGEGAQSAAMQLAERVRDDLPNLKLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              NF  Q+  AD+    +A+I G  E +   + +KDL  G++ +    +  
Sbjct: 366 GG-NFKKQITRADKWGARVALILGENEIAAKQVVVKDLRSGEQETLAQADVA 416


>gi|212710614|ref|ZP_03318742.1| hypothetical protein PROVALCAL_01680 [Providencia alcalifaciens DSM
           30120]
 gi|212686695|gb|EEB46223.1| hypothetical protein PROVALCAL_01680 [Providencia alcalifaciens DSM
           30120]
          Length = 425

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 101/467 (21%), Positives = 188/467 (40%), Gaps = 63/467 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           MGK      +  RG  D    + R+  +I  +++NI + YGF  I TP++E +    + +
Sbjct: 1   MGKN----IQAIRGMNDYLPADTRVWQKIEATLKNILQGYGFSEIRTPIVEQTPLFRRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D + + ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFNDRNEESLTLRPENTAGCVRAGIEHGLLYNQEQRLWYLGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G +    DAE+ +M A    A+GI  +     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGAEVFGLAGPDIDAEVILMTARWWRALGISEHVTLELNSIGSLDARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +          +      
Sbjct: 177 YRDALVAFLEQHKDKLDE--------DCKRRMYSNPLRVLDSKN---------QDIQALL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L+                            + +++  
Sbjct: 220 NDAPALFDYLDAESREHFEGLCKLLDNA-----------------------GIQYRVNQR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTTA--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R+++ ++ +        +     +       +S     +  + +R     +R     G
Sbjct: 309 MERMVLLVQEVN--PEFTADTSVADVYLASFGENSQQAALLIAEKVRDELPTLRLMTNHG 366

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
              NF  QL  AD++   +A+I G  E +   + +KDL  G++ +  
Sbjct: 367 GG-NFKKQLARADKQGAKIALILGEDEINNSQVTLKDLRTGEQETIS 412


>gi|289450179|ref|YP_003475044.1| histidine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184726|gb|ADC91151.1| histidine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 419

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 93/463 (20%), Positives = 176/463 (38%), Gaps = 58/463 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF-LPDEDR 65
           ++   PRG  D    EI     +      +   + F  I  P  E ++   +      D 
Sbjct: 1   MKYSAPRGTRDILPDEIYRWQYVERVFAEVCRQFAFSEIRIPTFEATEVFARGVGGSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + ++LR + TA + R   E    ++ +P R Y    +FR E+   GR
Sbjct: 61  VRKEMYTFLDKSDRSMTLRPEGTAGVVRSFIEQGMSSLPYPVRLYYNLNLFRYERVAKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILE 180
           +R+F Q   +  G++    D EM  ++    + +G+       +       R   + +L 
Sbjct: 121 YREFHQLGAEAFGAAGAMMDIEMIALLHSFFKRLGLHSTALHINSIGTPACRSEYNKVLR 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +     + +L          D  ++     +++L  + + D+  +  + A         +
Sbjct: 181 EYLRPYETEL--------CGDCCERLAKNPLRVL--DCKVDHCHEIARNA-------PRL 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L  +  +    L + +                               I + IVRGL+
Sbjct: 224 LDYLDTESAEHFAALKDGLTAL-----------------------GIPFVIDTDIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E +         +     G++ GGGRYD LV    G  VPA GF++G  R   
Sbjct: 261 YYTKTVFEFV--------SENVGTQGTICGGGRYDCLVEEMGGTAVPAVGFALGEER--- 309

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L  + +   +I    P  I       ++  K       LR  GI A+  L   +    Q
Sbjct: 310 LLMEMAAQQLDIPRPTPTDIYVAPMGENAQWKAMCLINQLREGGIVAQTDLC-GRTLKAQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +K+AD+      ++ G  E + G  ++K++  G + S   ++ 
Sbjct: 369 MKFADKIGARFVLVLGENELTSGYAELKNMQDGSKTSIHWEDL 411


>gi|228473639|ref|ZP_04058391.1| histidine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275011|gb|EEK13821.1| histidine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 454

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 135/485 (27%), Positives = 218/485 (44%), Gaps = 58/485 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I+ +IR  +E +GF PIETP  E +++L GK+  + DR 
Sbjct: 3   KPSIPKGTRDFSPSEVAKRNYIVQTIRKNFEQFGFQPIETPCFEKTETLMGKYGEEGDRL 62

Query: 67  NKGVFSLQDDDG-------QWI---------------SLRYDLTAPLARYVAENFDTIVF 104
              +F + D          +                 +LRYDLT P ARYV ++ + I F
Sbjct: 63  ---IFRILDAGDFLSEVPAEVYQSANSAKLAPYISGKALRYDLTVPFARYVVQHQNEISF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VG+     + E   +       + +K   
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGARGLWQEVEFVQLYDRVFTDLQVKG-- 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +N+RKIL G  E IG          +    A+DKLDK G + V+  +         
Sbjct: 178 VTIKMNHRKILSGFAEIIGAPDK-----LIDFTVALDKLDKIGKEKVEEEMI-------- 224

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  +T E I  +    S++ +  + + +L +++  +  G +G  +L  I    +  
Sbjct: 225 ----QRGITPEAIAKIQPVFSLEGDFSQKIAQLKDILSTSPTGLEGIADLEFIYTQTQLL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G  +  +++  T+ RGL YYTG ++E            K V  GS+GGGGRYD L   F 
Sbjct: 281 GLQTAALELEVTLARGLNYYTGAIFEV--------AAPKEVALGSIGGGGRYDELTEIFG 332

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            + +   G S G+ R+ + L+ L+     +     VL                  Q LR 
Sbjct: 333 LKGMSGIGISFGLDRIYLVLEQLDLFPKTLDNTLDVLCINFGEKEAL--ASFKVIQQLRA 390

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            G RAE++  S+K    QL YAD R     I+ G  E S     +K++  G++ +  ++ 
Sbjct: 391 KGYRAELYPESTK-LKKQLSYADSRQVRYVILIGEEELSNATAVLKNMLTGEQNTYPLQE 449

Query: 463 NESWR 467
             +  
Sbjct: 450 IVNHI 454


>gi|319945852|ref|ZP_08020102.1| histidine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747917|gb|EFW00161.1| histidine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 424

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 101/475 (21%), Positives = 177/475 (37%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      +    R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEGFARETFKKYNYAEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y IGP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKVYYIGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR RQF Q  V+  GSS    D E   M     + +GI+      +      +R      
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMADQFFKEIGIENVVLHLNTLGSTASRTAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L    L   D+L++        D   +     +++L  + + D             E   
Sbjct: 181 LIDYLLPMKDQLSK--------DSQRRLEENPLRVLDSKEKEDKQ---------AVENAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + ++    +  ++ G                             I + +VRG
Sbjct: 224 SILDYLDEESQEHFDAVRAMLDGLGID-----------------------YVIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E +                +V  GGRYDGLV  F G   P  GF +G+ RL
Sbjct: 261 LDYYNHTIFEFVTKVD--------GNELTVCAGGRYDGLVEYFGGPATPGFGFGMGLERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L            +    +      S++        Q LR  G  AE      +   
Sbjct: 313 LLILDKQGVELPVEASLD---VYVAVLGSEAEVAALELVQALRRQGFIAERDY-LGRKLK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD       I  G  E   G + +K+    +E++  I++ ++  +  + Q
Sbjct: 369 AQFKSADVFGAKTIIALGGSEVESGQITVKNNQTRQEVTTSIEDVKNDFQTILNQ 423


>gi|306826279|ref|ZP_07459613.1| histidine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431555|gb|EFM34537.1| histidine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 426

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 102/459 (22%), Positives = 179/459 (38%), Gaps = 52/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVVSRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDAESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +  +++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGEEANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD       I  G  E   G + +K+    +E+   + 
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVEVTLD 411


>gi|317490870|ref|ZP_07949306.1| histidyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920417|gb|EFV41740.1| histidyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 424

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 97/473 (20%), Positives = 184/473 (38%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +   I  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPEDTALWQPIEAALKQVLTSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G +    DAE+ ++ A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGAEVFGLNGPDVDAELILLTARWWRALGISEHVSLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +     +           
Sbjct: 177 YRDALVAYLEQFKDKLDE--------DCKRRMYSNPLRVLDSKNPEVQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L+            L                      
Sbjct: 220 NDAPRLSEYLDEESREHFAGLCQLLDDAGIAYTVNERL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV++  G   PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTNS--------LGAQGTVCAGGRYDGLVAQLGGHATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++     + +    V +  +     + S      + +R A   ++     G
Sbjct: 309 LERLVLLVQAVN---PDFQPQRAVDVYLISSGEGTQSAAMRLAEKIRDAYPQVKLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q   AD+    +A++ G  E + G + +K+L  G + +    +  +
Sbjct: 366 GG-NFKKQFARADKWGARIALVLGENEMNAGQINVKNLQSGDQQTIAQDDVAA 417


>gi|315221549|ref|ZP_07863469.1| histidyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315189383|gb|EFU23078.1| histidyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 431

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 95/475 (20%), Positives = 181/475 (38%), Gaps = 52/475 (10%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+  ++ + P+G  D   +E      + +  R  ++ Y +  I TPL E+ + + + + D
Sbjct: 2   KRKAMKLQKPKGTQDILPQESVKWQYVEEFARKTFKKYHYAEIRTPLFEHYEVISRSVGD 61

Query: 63  -EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNE 118
             D   K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E
Sbjct: 62  TTDIVTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYMGSMFRYE 121

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR R+F Q  V+  GS+    D E   M A     +GI+     +           
Sbjct: 122 RPQAGRLREFHQIGVECFGSNNPATDVETIAMAAQFFNEIGIQGVTLQLNSLGNAESRAA 181

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
             +  +     L + L    + D   +     +++L  + + D          L  E   
Sbjct: 182 YRQALIDYLTPLKDSL----SKDSQRRLEENPLRVLDSKEKEDK---------LAVENAP 228

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +     +  +++                              I++ +VRG
Sbjct: 229 SILDYLDEESQTHFQAVRSMLEAL-----------------------KIPYVINTNMVRG 265

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E                  ++  GGRYD LV+ F G      GF +G+ RL
Sbjct: 266 LDYYNHTIFEFT--------AAVAGNELTICAGGRYDSLVAYFGGPETAGFGFGMGVERL 317

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+    +      +  V +  +   +++  K     Q LR  G  AE     ++   
Sbjct: 318 LLVLEKQGVALPLEDSLD-VYVAVLGEGANN--KALEIVQALRKQGFTAERDY-LNRKLK 373

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD  +  + I  G  E     + +K+    +EL+ ++   +   +    Q
Sbjct: 374 AQFKSADTFSAKVLITLGESEIESNQVTVKNNHTREELTVDLNQIQEDFQTIFEQ 428


>gi|309388965|gb|ADO76845.1| histidyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 424

 Score =  258 bits (659), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/475 (21%), Positives = 187/475 (39%), Gaps = 58/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + PRG  D           I +    ++ NY +  I TP+ EY++   + + +  D 
Sbjct: 1   MKFKAPRGTNDILPPATLKWQYIEEKTHEVFSNYNYHEIRTPIFEYTELFQRGIGEVTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ ++LR + TA + R   EN       P + Y IGP+FR E+   GR
Sbjct: 61  VEKEMYTFEDKGGRSLTLRPEGTASVIRSFLENKIYGQAQPTKYYYIGPMFRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
           FRQF Q  V+ + S+    DAE+  +    L+  G+       +       R      L+
Sbjct: 121 FRQFHQLGVEAIASNDPALDAEIISLGIRLLQKFGLNELELNLNSVGCQECRPDYVAKLK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      ++L          +   +     +++L  +          K           +
Sbjct: 181 EYLTKNKEQL--------CDNCKSRIERSPLRVLDCKN---------KNCQSVINSAPKI 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L    ++   E+   +                              +I+  +VRGL+
Sbjct: 224 TENLCSSCDEHFKEVQSYLDILEID-----------------------YQINPLLVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E         +        ++ GGGRY+GL      ++VP  GF++GI RL++
Sbjct: 261 YYTNTAFEI--------KDNALGAQDTIFGGGRYNGLAEEIGNRDVPGIGFALGIERLLL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           +L++ +     +     V +      + +  +       LR++G + EM     +  G+Q
Sbjct: 313 SLEAKDI---KLPVEAGVDLYITVIGAKAKRESFKLLDKLRSSGFKTEMDY-LDRGVGSQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +K ADR N    II G  E ++    I+++  G E   ++ N     +  VA+  
Sbjct: 369 MKSADRMNAEYTIIIGEDELNKNAATIRNMKSGTEKEIKLTNLLEEMKQLVAKEE 423


>gi|229824082|ref|ZP_04450151.1| hypothetical protein GCWU000282_01386 [Catonella morbi ATCC 51271]
 gi|229786436|gb|EEP22550.1| hypothetical protein GCWU000282_01386 [Catonella morbi ATCC 51271]
          Length = 442

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 110/487 (22%), Positives = 186/487 (38%), Gaps = 63/487 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +  +++     G  D    E RI   I DS R ++E Y F  I TPL E  +   +  
Sbjct: 1   MAQVKRMK-----GTVDILPAESRIWQYIEDSARAVFETYNFQEIRTPLFEAYELFARSS 55

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFR 116
            D  +  +K ++  +D   +  +LR + TA + R   EN         P + Y +G +FR
Sbjct: 56  GDTSEIVSKEMYDFKDKGDRHCALRPEGTAGVVRAFVENKLFGPEHAKPYKVYYMGSMFR 115

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNR 172
            E+   GR RQF Q  V+  GS+    DAE   +  D  + +GI+    +I       +R
Sbjct: 116 YERPQAGRQRQFNQIGVEVFGSTNPATDAETIALAWDFFQELGIEGLTLYINSLGSSQDR 175

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
                 L        D+L        + D   +     +++L  +   D +         
Sbjct: 176 ARYRQALVDYFTPLADQL--------SADSQRRLTDNPMRILDSKAPEDKA--------- 218

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
                  +  +LS + +     +  +++                              + 
Sbjct: 219 LVANAPKIPDYLSPESKDHFETVKAMLEALE-----------------------IPYLVD 255

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            ++VRGL+YY   ++E ++    +  K       ++ GGGRYDGLV    G   P  GF 
Sbjct: 256 PSVVRGLDYYQDTIFEIMVDDQAIGAK------STICGGGRYDGLVEALGGPATPGFGFG 309

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG+ RL++ LK  E     + E  P+ +  M     S        Q  R  G+ AE    
Sbjct: 310 IGVERLLLLLKQQEV---EVPEAEPLDVYVMGLGQASNIMALRLVQAARKEGLLAERDY- 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             ++   Q K AD+    + +  G  E + G +Q K    GK+++  +            
Sbjct: 366 LDRSLKAQFKQADKLKAQVILTIGEDELAAGTVQAKHPTSGKQVTLPLDQVLEDFMGTYR 425

Query: 473 QITIPIS 479
           Q+T+  S
Sbjct: 426 QLTVDTS 432


>gi|149002958|ref|ZP_01827869.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|149006905|ref|ZP_01830586.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|225855611|ref|YP_002737123.1| histidyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|254782350|sp|C1CH52|SYH_STRZJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|147758961|gb|EDK65956.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147761506|gb|EDK68471.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|225722383|gb|ACO18236.1| histidyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 429

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETISMAAYFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|153949863|ref|YP_001400168.1| histidyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|166980051|sp|A7FFZ0|SYH_YERP3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|152961358|gb|ABS48819.1| histidyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
          Length = 424

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/477 (20%), Positives = 181/477 (37%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK---------RNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ ++ A    A+GI                  +
Sbjct: 117 PQKGRYRQFHQLGAEVFGLPGPDIDAELILLTARWWRALGIFEHVKLELNSIGSLAARAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YREALVAFLEQHVEVLDE------------DCKRRMYSNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +    +  +L  + ++    L EL+            L                  
Sbjct: 216 QQLLDDAPKLSDYLDEESKQHFAGLCELLDKASIPYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTHS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++ +   + +    V    +     S S   +  + LR A   ++  
Sbjct: 305 FAMGLERLVLLVQAVNA---DFQVPATVDAYVISSGEGSQSAAMLLAESLRDALPTLKIM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              G   N   Q   AD+    +A++ G  E +   + +KDL  G++ +    +  +
Sbjct: 362 TNYGGG-NVKKQFTRADKCGARVALMLGESEVAAQQVVVKDLRNGEQETLAQADVAA 417


>gi|306828547|ref|ZP_07461742.1| histidine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429346|gb|EFM32431.1| histidine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 426

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 103/459 (22%), Positives = 178/459 (38%), Gaps = 52/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDVLPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      N         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGNN--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGEGANV--KALQLVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD       I  G  E   G + +K+    +E+   + 
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLD 411


>gi|291618410|ref|YP_003521152.1| HisS [Pantoea ananatis LMG 20103]
 gi|291153440|gb|ADD78024.1| HisS [Pantoea ananatis LMG 20103]
          Length = 424

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 101/470 (21%), Positives = 177/470 (37%), Gaps = 72/470 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  R+ D ++++  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDFLPADTAIWQRVEDVLKSVLASYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ M+ A   +A+G                   N
Sbjct: 117 PQKGRYRQFHQIGVEVFGLQGPDIDAELIMLNARWWKALGIADHVRLELNSIGSPEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHKEALDE------------DCKRRMYSNPMRVLDSKN---------PDI 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L ++  +    L  L+            L                  
Sbjct: 216 QTLLNDAPQLGDYLDVESREHFDGLRALLDDAGIAYTVNQRL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V E +               G+V GGGRYDGLV +  G+  P  G
Sbjct: 258 -----VRGLDYYNRTVIEWVT--------DSLGSQGTVCGGGRYDGLVEQLGGRATPGVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       +    V +  +       S      + LR     ++  
Sbjct: 305 FAMGMERLVLLVQAVN---PEFEPARNVDVYVIASGQGVQSAAMQLAEKLRDHLPEMKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
              G   NF  Q   AD+    +A++ G  E+  G + IKDL  G++ + 
Sbjct: 362 TNFGGG-NFKKQFARADKWGARVALVLGEDEQKAGQVVIKDLRNGEQQTL 410


>gi|261403411|ref|YP_003247635.1| histidyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370404|gb|ACX73153.1| histidyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 414

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 114/457 (24%), Positives = 205/457 (44%), Gaps = 48/457 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D   +E++ R  + + +R ++E YG+D I TP  E  + + K   +E R  K
Sbjct: 2   FQKPRGTRDFLPEEMKKRRFVENKLREVFERYGYDEILTPTFESFELIAKKTGEEIR--K 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ ++LR ++T+P+ R+       +  P R Y     FR E+   GRFR+F
Sbjct: 60  QLYVFKDHGGREMALRPEMTSPVVRFYLNELKNLQKPLRLYYFANCFRYERPQAGRFREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G     ADAE+  +  D L  +G+   D+ + I +  +L G+LE+  +  ++
Sbjct: 120 WQMGCELIGCKNAIADAEVLNLAMDGLINIGL---DFDVHIGHLGVLKGVLEEFNVSEEE 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           ++                    ++ L+ +   +N   +     L  E+ +++   L    
Sbjct: 177 EV-------------------KIRRLIDKEDYENLEIYLTQI-LGEEKKELIFEILKFKG 216

Query: 249 EKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            K  + EL E++K      +  N L  I E V       ++  I+  I RGL+YYTG V+
Sbjct: 217 GKEILDELKEILKDFPKSVEAVNNLEEILEFV-----IHDKYIINFGIARGLDYYTGMVF 271

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                   + GGGRYD L+  F   +VPA GF+ G  R+++ +  LE 
Sbjct: 272 EIYGKKGAKQ----------ICGGGRYDNLIETFGNISVPAVGFAYGFDRIMMNIDDLEI 321

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                     +L+  +  D + + +  +    LR AG   E  +   +     L YA+ +
Sbjct: 322 EEEK------ILVIPVKKDKELIKESLLIANKLRKAGKIVEFEI-MGRKLRKALDYANSK 374

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
                II G  E + G + +KD+  G++   +I + +
Sbjct: 375 GFKKVIIVGEKELNEGKITLKDMITGEQKLVDITDLD 411


>gi|237650856|ref|ZP_04525108.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822706|ref|ZP_04598551.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
          Length = 425

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETISMAAYFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|148990507|ref|ZP_01821648.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924265|gb|EDK75361.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 426

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 180/461 (39%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E +  ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENVPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|171687327|ref|XP_001908604.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943625|emb|CAP69277.1| unnamed protein product [Podospora anserina S mat+]
          Length = 598

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 126/536 (23%), Positives = 212/536 (39%), Gaps = 76/536 (14%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL--- 56
           M  K  K   + P+G  D    ++ +R +I ++I N+++ +G   I+TP+ E  + L   
Sbjct: 55  MAPKAPKFEIKTPKGTRDWSGADMVLREKIFNTITNVFKRHGGVTIDTPVFELKEILAGK 114

Query: 57  ----GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
               GK+  D    +K ++ L D  G+  SLRYDLT P AR++A N D  +   + Y I 
Sbjct: 115 PHPTGKYGED----SKLIYDLADQGGELCSLRYDLTVPFARFLAMNKD--ISQIKRYHIA 168

Query: 113 PVFRNEKH--GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
            V+R ++     GR R+F QCD D  G           + + + +      +  Y I +N
Sbjct: 169 KVYRRDQPAVKKGRMREFYQCDFDIAGLYDPMIPDAEIIRIINEVFEGLGWQGKYTIKLN 228

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           +RKILDGI +  G+           +  A+DKLDK   + V+  + E             
Sbjct: 229 SRKILDGIFQVCGVPEAS----IRPISSAVDKLDKMPWEDVRKEMVEE-----------K 273

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
            L  E  D +  ++ +  ++ + E     E +    + ++GF ++ ++   +       +
Sbjct: 274 GLAPEIADKIGKYVVLKGKRDLLEQLQKDEELAANPSMQQGFADMDLLFTYLDAFN-AGH 332

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGF--------------------------PVMNEKQK 321
            +    ++ RGL+YYTG +YE +                                     
Sbjct: 333 SVSFDLSLARGLDYYTGVIYEVVTEGSAPKVSAASADASAEKSKKKKGKAGEDEDRSDDP 392

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
            V  GSV  GGRYD LV  F G+              I ++     +    K    V + 
Sbjct: 393 TVGIGSVAAGGRYDNLVGMFSGKTQVPCVGISFGIDRIFSIMRANQAKKERKNEVDVFVM 452

Query: 382 TMDHDSD---SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
                 D    L +       L  A I+AE          NQ K A+    P A+I G  
Sbjct: 453 AFGGGKDFTGLLKERSEIAARLWDANIKAEFLYKVKPKLQNQFKAAEANGVPFALILGED 512

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           E ++G ++IK++  G      +K  E           I +  L   V+  ++  K+
Sbjct: 513 ELAQGKIKIKEM--GLPEDHPLKEGEL----------IDLKNLTKEVQVRIERKKQ 556


>gi|331265541|ref|YP_004325171.1| histidyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682213|emb|CBY99830.1| histidyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 426

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 102/459 (22%), Positives = 178/459 (38%), Gaps = 52/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVTL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD       I  G  E   G + +K+    +E+   + 
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLD 411


>gi|309799303|ref|ZP_07693550.1| histidyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308117081|gb|EFO54510.1| histidyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 426

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/459 (21%), Positives = 178/459 (38%), Gaps = 52/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L + L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKDSL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 YLDAESQAHFDAVRQMLENLGVA-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I                +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEDNE--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGEGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD       I  G  E   G + +K+    +E+   ++
Sbjct: 373 SADVFAAKAIITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|86142224|ref|ZP_01060734.1| histidyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85830976|gb|EAQ49433.1| histidyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 456

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 135/480 (28%), Positives = 226/480 (47%), Gaps = 52/480 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR- 65
           +  +P+G  D   +E+  RN I++++R+ +E +GF PIETP  E S +L GK+  + DR 
Sbjct: 4   KPSIPKGTRDFSPEEVLRRNYIINTLRSNFELFGFQPIETPSFENSSTLMGKYGDEGDRL 63

Query: 66  -------------PNKGVFSLQDDDG-----QWISLRYDLTAPLARYVAENFDTIVFPCR 107
                         N  V+  +D +         +LRYDLT P ARYV ++ + I FP +
Sbjct: 64  IFKILNSGDYLSKVNDSVYQERDSNKLTSEISEKALRYDLTVPFARYVVQHQNEIEFPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GRFR+F QCD D VGS +   +     +       +G+K     +
Sbjct: 124 RYQIQPVWRADRPQKGRFREFFQCDADAVGSDSLLQEVAFVQLYDAVFTDLGLKG--TTV 181

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +NNRKIL G+ E IG          +    A+DKLDK G +GV   +            
Sbjct: 182 KMNNRKILSGLAEAIGAADK-----LIDFTVALDKLDKIGEEGVIKEML----------- 225

Query: 228 KGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++ E I  +    ++     + +  L +L+  +  G++G  EL  I++ +   G  
Sbjct: 226 -AKGISEEAITRVKPIFNVSGTFAEKLELLNQLLADSDVGKQGIEELAYINDKIEALGLT 284

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +  + +  T+ RGL YYTG ++E      V          GS+GGGGRYD L   F  +N
Sbjct: 285 TVTLDLDVTLARGLNYYTGAIFEVAAPEGVK--------MGSIGGGGRYDDLTGIFGLKN 336

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G+ R+ + L+ L        +   +L                  + LR AGI
Sbjct: 337 MSGVGISFGLDRIYLVLEELGLFPEQAIKGTKLLFINFGEAESL--YCLKAVKALREAGI 394

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            +E++  ++K    Q+ +AD+RN    ++ GT E   G+  +K++  G +   +++  ++
Sbjct: 395 TSELYPDAAK-MKKQMSHADKRNIQFVVLAGTQEMEEGVYTLKNMKTGDQTRVDLEGLKA 453


>gi|116495010|ref|YP_806744.1| histidyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|191638516|ref|YP_001987682.1| histidyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|122263573|sp|Q038S0|SYH_LACC3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558690|sp|B3WEM3|SYH_LACCB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116105160|gb|ABJ70302.1| histidyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|190712818|emb|CAQ66824.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Lactobacillus casei BL23]
 gi|327382552|gb|AEA54028.1| Histidyl-tRNA synthetase 2 [Lactobacillus casei LC2W]
 gi|327385749|gb|AEA57223.1| Histidyl-tRNA synthetase 2 [Lactobacillus casei BD-II]
          Length = 427

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 190/476 (39%), Gaps = 61/476 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD    +     ++    R I+  Y +  I TP+ E  D   +   D  D 
Sbjct: 1   MNYQRPKGTADILPGQSERWQQVEAVARKIFAQYQYHEIRTPIFENVDVFSRSAGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K +++ +D   + ++LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYTFKDKGDRMMALRPEGTAGVVRAYVENKLYGPEHAKPYKVYYLGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR RQF Q  V+  GS +   DAE   +    LEA+G K   + I        RK     
Sbjct: 121 GRQRQFHQIGVEAFGSDSPVLDAETLALAKQLLEALGAKHLKFVINSLGDPATRKAFHAA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  + + D                 
Sbjct: 181 LVDYLTPFKDQLSE--------DSKVRLVKNPLRILDSKDKHDQE---------IVANAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ + ++    +  L++G                            ++ +T+VRG
Sbjct: 224 SILDYLTPEAQQHFDRVKTLLQGL-----------------------GIPFEVDATMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E +      ++K     + ++  GGRY+GLV    G   P  GF++G+ RL
Sbjct: 261 LDYYNHTIFEVM-----SDDKVFGGGYTTILAGGRYNGLVEELGGPETPGIGFAMGVERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++                I T+D  +D   +       +R  G   EM     +   
Sbjct: 316 MLLMQ-----GELPTAQPDAYIVTIDQGAD--QEALQMLTAIRQQGFTGEMDY-MGRKPK 367

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            Q K A++ N  L +  G  ER+ G +QIK++A G + +    +  +       Q+
Sbjct: 368 GQFKAANKANAKLVLTIGESERAAGTVQIKNMATGDQQAFPQADVLADFGKIYTQV 423


>gi|253988868|ref|YP_003040224.1| histidyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780318|emb|CAQ83479.1| histidyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 425

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 107/473 (22%), Positives = 185/473 (39%), Gaps = 63/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI ++++ +   YG+  I TP++E +    + +
Sbjct: 1   MAKN----IQALRGMNDYLPADTAIWQRIENTLKRVLAGYGYSEIRTPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPENTAGCVRAGIEHGLLYNQEQRVWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ +M A     +GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFYQLGAEVFGLQGPDIDAELILMTARWWRELGISEHVTLELNSIGSLEARAS 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +                 
Sbjct: 177 YREALVAFLEQHKDKLDE--------DCKRRMYSNPLRVLDSKNPEVQQ---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  + ++  + L  L+  T                         + +I+  
Sbjct: 220 NNAPELFDYLDAESKEHFNSLCALLDAT-----------------------GIKYRINQR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G++ PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTTA--------LGAQGTVCAGGRYDGLVEQLGGRSTPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R  + L   E +   + E+    +        S     +  + +R     +R  M  G
Sbjct: 309 MER--LVLLVQEINPAFMAELSVADVYLASFGEGSQQAALILAEQVRDMLPQLRLMMNHG 366

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  QL  AD+    +A+I G  E   G + IKDL  G++ +       +
Sbjct: 367 GG-NFKKQLGRADKHGAKIALILGEDEIRSGQVAIKDLRTGEQQTLSQGEIAA 418


>gi|329955323|ref|ZP_08296231.1| histidine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328525726|gb|EGF52750.1| histidine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 458

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 151/486 (31%), Positives = 220/486 (45%), Gaps = 61/486 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 9   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 66

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 67  -KLLFKIQNSGDYFSGLTDEELLSRNAPRLACKFCEKGLRYDLTVPFARYVVMHRDEITF 125

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 126 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 182

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L E       
Sbjct: 183 VCIKINNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNAELKEK------ 231

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  +  E I  +     LS   E+ +  L +++  +  G +G  E   I + +   
Sbjct: 232 ------GIGDEAIAKLQPIILLSGSNEEKLATLKQVLSASETGLRGVEESEFILKTLSTL 285

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 286 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 335

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S        +R 
Sbjct: 336 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTQLLFINFGEKEAAFS--MNVLAQVRA 393

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  SSK    Q+ YA+ +  P   + G  E + G + +K++  G++ S   + 
Sbjct: 394 AGIRAEIFPDSSK-MKKQMSYANSKMIPFVALVGENEMNEGKVTLKNMETGEQKSVTPEE 452

Query: 463 NESWRE 468
             S   
Sbjct: 453 LVSELS 458


>gi|84387626|ref|ZP_00990643.1| histidyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84377471|gb|EAP94337.1| histidyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 422

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 102/477 (21%), Positives = 185/477 (38%), Gaps = 73/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++  +++++   YG++ +  P++E ++   + +
Sbjct: 1   MAKN----IQAIRGMNDCLPTQSPLWQKVESAVKSVVSAYGYNEVRMPIVEETNLFSRAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEETDVVSKEMYTFDDRNGDSLTLRPEGTAGCVRSCIQNSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                  ++
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSQEDRVS 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALVAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+       +    L                  
Sbjct: 216 QAILGDAPRLSEYLGEESKQHFAGLCELLDAVGIEYQVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I               G+V GGGRYDGLV +  G+   A G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------DSLGAQGTVCGGGRYDGLVEQLGGKATNAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAE 408
           F++G+ RL++ +++LE +         V +  +     ++         LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLELTEVRRS----VDVYVVAAGEGTMIAGMQLANQLRDTVEGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           M      NF  Q K AD+    +A++ G  E +   + +KDL  G++ +        
Sbjct: 360 MNHFGGGNFKKQFKRADKVGAVVALVLGENEVADNTVVLKDLVGGEQETVSQTEVAE 416


>gi|83747948|ref|ZP_00944979.1| Histidyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83725366|gb|EAP72513.1| Histidyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 440

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 108/510 (21%), Positives = 194/510 (38%), Gaps = 86/510 (16%)

Query: 1   MGKKTKLRAEL---PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M    K R +     +G  D    +  +     +++R++   YG+  I TP++E++    
Sbjct: 1   MSDTQKQRVQKIAGVKGMNDLLPGDAPLWEHFDNAVRSMLRAYGYQQIRTPIVEHTQLFV 60

Query: 58  KFLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
           + + +  D   K ++S  D  +G+ ++LR + TA   R V E+      P R +  GP+F
Sbjct: 61  RGIGEVTDIVEKEMYSFTDSLNGEQLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMF 120

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHI 167
           R+E+   GR+RQF Q  V+ +G +    DAE+ +M     + +G                
Sbjct: 121 RHERPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEE 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              +R  L   LE      D+            D   +     +++L  +          
Sbjct: 181 RAAHRADLIKYLEDFQDILDE------------DSKRRLYTNPLRVLDTKNPALQEMAAG 228

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                       ++ +L     K    +  L+K                         + 
Sbjct: 229 ---------APKLIDYLGEASLKHFEGVQALLKAN-----------------------NI 256

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
              I+  +VRGL+YY   V+E            K    G+V GGGRYD L+ +  G+  P
Sbjct: 257 PYTINPRLVRGLDYYNLTVFEWTT--------DKLGAQGTVAGGGRYDPLIEQIGGKPAP 308

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           A G+++G+ R+I  L+  + +           +  +     +  +  +  + LR AG+  
Sbjct: 309 ACGWAMGVERIIELLREEKLAPEPQ----GCDVYIVHQGDQAQVQALVAAERLRDAGLDV 364

Query: 408 EMFL---GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            +     G + +F +Q K AD      A+I G  E + G+ QIK L  G+          
Sbjct: 365 ILHCSPEGRNGSFKSQFKRADASGASYAVIIGDDEVAAGVAQIKPLR-GE---------- 413

Query: 465 SWREARVAQITIPISELVSTVKKILQENKE 494
                   Q T+P  +LV  +   +  N +
Sbjct: 414 ---PNADTQQTVPSDQLVDRLIDAMVANSD 440


>gi|22125253|ref|NP_668676.1| histidyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|21958124|gb|AAM84927.1|AE013738_4 histidine tRNA synthetase [Yersinia pestis KIM 10]
          Length = 424

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/477 (20%), Positives = 182/477 (38%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA  AR   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCARAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK---------RNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ ++ A    A+GI                  +
Sbjct: 117 PQKGRYRQFHQLGAEVFGLPGPDIDAELILLTARWWRALGIFEHVKLELNSIGSLAARAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YREALVAFLEQHVEVLDE------------DCKRRMYSNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +    +  +L  + ++    L EL+            L                  
Sbjct: 216 QQLLDDAPKLSDYLDEESKQHFAGLCELLDKASIPYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTHS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++ +   + +    V    +     + S   +  + LR A   ++  
Sbjct: 305 FAMGLERLVLLVQAVNA---DFQVPATVDAYVISSGEGAQSAAMLLAESLRDALPTLKIM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              G   N   Q   AD+    +A++ G  E +   + +KDL  G++ +    +  +
Sbjct: 362 TNYGGG-NVKKQFTRADKWGARVALMLGESEVAAQQVVVKDLRNGEQETLAQADVAA 417


>gi|288549933|ref|ZP_05968676.2| histidine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288317244|gb|EFC56182.1| histidine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 440

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 106/490 (21%), Positives = 190/490 (38%), Gaps = 78/490 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    E  I  RI  +++ +  +YG+  I  P++E +    + + +  D  
Sbjct: 20  NIQAIRGMNDYLPGETAIWQRIEGTLKQVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVV 79

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+   GR+R
Sbjct: 80  EKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYR 139

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q  V+  G      DAE+ M+ A    A+GI  +     +    +  R      L  
Sbjct: 140 QFNQLGVEVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLEARANYRDALVA 199

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 DKL+E        D   +     +++L  +                      + 
Sbjct: 200 FLEQHKDKLDE--------DCQRRMYSNPLRVLDSKN---------PDVQALLNDAPALG 242

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  +  +    L +L++           L                       VRGL+Y
Sbjct: 243 DYLDAESREHFDGLCKLLEAAGIAYTVNQRL-----------------------VRGLDY 279

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ RL++ 
Sbjct: 280 YNRTVFEWVTTS--------LGSQGTVCAGGRYDGLVEQLGGRAAPAVGFAMGLERLVLL 331

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGN 419
           ++++       K    V I  +   +D+ S      + +R A   ++     G   NF  
Sbjct: 332 VQAVN---PEFKADSVVDIYLVASGADTQSAAMQLAERVRDALPDVKLMTNHGGG-NFKK 387

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           Q   AD+    +A++ G  E + G + +KDL  G++                   T+   
Sbjct: 388 QFARADKWGASIALVLGESEVANGDVVVKDLRSGEQT------------------TVTQD 429

Query: 480 ELVSTVKKIL 489
            + + ++ +L
Sbjct: 430 GVAAHLRTLL 439


>gi|329724725|gb|EGG61231.1| histidine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 424

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 96/465 (20%), Positives = 187/465 (40%), Gaps = 48/465 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++      I + +  + E Y +  I TP+ E ++   + + D  D   
Sbjct: 2   IKMPRGTQDILPQDSAKWRYIENRLHTLMELYNYKEIRTPIFESTELFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + ++LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSLTLRPEGTAAVVRSYIEHKMQGEPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+ +G+   + DAE+  M+    E+ G+K    H+ +    I D    K    
Sbjct: 122 RQFNQFGVEAIGAENPSIDAEILAMVMHIYESFGLK----HLKLVINSIGDSESRKEYNE 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              K  E +I     D   +     +++L  +   D             +    +  +L+
Sbjct: 178 ALVKHFEPVIDTFCSDCQSRLHTNPMRILDCKIDRDKE---------AVKNAPRITDYLN 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D +     +   +                          +        +VRGL+YYT  
Sbjct: 229 NDSKSYYERVKLHLDNL-----------------------NISYVEDPNLVRGLDYYTHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E ++  P     +      ++ GGGRY+GL+    G +    GF++ I RL++AL   
Sbjct: 266 AFELMIDNP-----EYDGAITTLCGGGRYNGLLQLLDGPDETGIGFALSIERLLMALDEE 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             S +  ++     +  +    D+          LR  GI+ +     ++    Q+K AD
Sbjct: 321 GISLDVSEDFD---LFVVTMGEDADRYAVKLINDLRRNGIKVDKDY-LNRKIKGQMKQAD 376

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           R N    ++ G  E     + +K++  G+  + ++    ++ ++R
Sbjct: 377 RLNAKYTVVIGDQELENNEIGVKNMISGESENVQLDELVNYFKSR 421


>gi|325285222|ref|YP_004261012.1| Histidyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324320676|gb|ADY28141.1| Histidyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 458

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 146/486 (30%), Positives = 224/486 (46%), Gaps = 56/486 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR- 65
           +  +P+G  D    EI  RN I D ++  ++ +GF PIETP  E S +L GK+  + DR 
Sbjct: 4   KPSIPKGTRDFSPSEIAKRNYIFDIVKKHFQTFGFQPIETPSFENSQTLMGKYGDEGDRL 63

Query: 66  -------------PNKGVFSLQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFP 105
                         N  V+  +D     ++       LRYDLT P ARYV  + + I FP
Sbjct: 64  IFKILNSGDYLNKVNDEVYQQKDSS--LLTPKISEKALRYDLTVPFARYVVMHQNEIDFP 121

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
            + Y+I PV+R ++   GRFR+F QCD D VGS +   + E+  +       + +     
Sbjct: 122 FKRYQIQPVWRADRPQKGRFREFFQCDADVVGSDSLLQEIELVQLYDAVFTNLKLTG--T 179

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I +NNRKIL GI E IG          +    A+DKLDK G++GV   + E        
Sbjct: 180 TIKLNNRKILAGIAEVIGAKE-----RLIDFTVALDKLDKIGVEGVTKEMLEK------- 227

Query: 226 FTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                 ++   I       S+     + +  L EL+K +  G+KG  EL  I + V K G
Sbjct: 228 -----GISEAAIQKATPLFSLAGTNTEQLKVLAELLKDSEEGKKGVEELTFIIKAVEKLG 282

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
             S  + I  T+ RGL YYTG ++E      V          GS+GGGGRYD L   F  
Sbjct: 283 LQSANLAIDVTLARGLNYYTGAIFEVAAPSGVK--------MGSIGGGGRYDDLTGIFGL 334

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
           ++V   G S G+ R+ + L+ L      I +   +L      +             LR  
Sbjct: 335 KDVSGVGISFGLDRIYLVLEELNLFPEEINKSLEILCVNFGDNEAF--AALELVTELRKN 392

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G++A+++  + K    Q+KYA++RN P  ++ G  E   G   +K++ KG + + ++ N 
Sbjct: 393 GVKADVYPSAVK-MQKQMKYANKRNVPYVVLIGEQELLNGDFVVKNMEKGDQQTYKLSNV 451

Query: 464 ESWREA 469
             +  +
Sbjct: 452 SEFIAS 457


>gi|322392494|ref|ZP_08065954.1| histidine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144486|gb|EFX39887.1| histidine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 426

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 103/459 (22%), Positives = 179/459 (38%), Gaps = 52/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+A+GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKAIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D +           E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDKA---------AVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                              I S +VRGL+YY
Sbjct: 228 YLDEESQAHFDAVRQMLENLGVD-----------------------YIIDSNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I         +      +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFIT--------EIEGNELTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +        I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVVL-PIENALDVYIAVLGEGANI--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD       I  G  E   G + +K+    +E+   ++
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|261252179|ref|ZP_05944752.1| histidyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260935570|gb|EEX91559.1| histidyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 422

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 108/481 (22%), Positives = 188/481 (39%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG  DC   +  +  ++ ++++N+   YG++ +  P++E +    + +
Sbjct: 1   MAK----KIQAIRGMNDCLPTQSPLWQKLENTVKNVVSAYGYNEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSCIENSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSLEDRAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     DD            D   +     +++L  +             
Sbjct: 177 YRTALIAFLEQHIDILDD------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+            L                  
Sbjct: 216 QAILGDAPRLSDYLGEESKEHFAGLCELLDAAGIEYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE +         V +  +     ++       + LR    G+R  
Sbjct: 305 FAMGLERLVLMLETLELTEVRRS----VDVYMVTAGEGTMMAGMKLAESLREQVSGLRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q K AD+    +A++ G  E +   + +KDL  G + +    +  +   
Sbjct: 360 MNHFGGGNFKKQFKRADKVGAAVALVLGENEVADNTVVLKDLIGGTQETYSQTDVIAKLS 419

Query: 469 A 469
            
Sbjct: 420 E 420


>gi|268593183|ref|ZP_06127404.1| histidine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311229|gb|EFE51682.1| histidine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 425

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 103/467 (22%), Positives = 187/467 (40%), Gaps = 63/467 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           MGK      +  RG  D    + R+  +I  +++NI + YGF  I TP++E +    + +
Sbjct: 1   MGKN----IQAIRGMNDYLPADTRVWQKIEATLKNILQGYGFSEIRTPIVEQTPLFRRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D + + ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFNDRNDESLTLRPENTAGCVRAGIEHGLLYNQEQRLWYLGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G +    DAE+ +M A   +A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGAEVFGLAGPDIDAEVILMTARWWKALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  + +   +           
Sbjct: 177 YREALVAFLEQHKDKLDE--------DCKRRMYTNPLRVLDSKNQEIQA---------LL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L ++  +    L +L++      +    L                      
Sbjct: 220 NDAPELFDYLDVESREHFDGLCKLLEAAGVQYRVNQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVTTA--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R+++ ++ +        +     +       +S     +  + +R A   +R     G
Sbjct: 309 MERMVLLVQEVN--PEFTADASVADVYLASFGENSQQAAILVAEKVRDALPTLRLMTNHG 366

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
              NF  QL  AD++   +A+I G  E     + +KDL  G + +  
Sbjct: 367 GG-NFKKQLARADKQGAKIALILGEDEIKNNQVTVKDLRTGVQETIS 412


>gi|149375010|ref|ZP_01892783.1| histidyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149360899|gb|EDM49350.1| histidyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 417

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 103/485 (21%), Positives = 190/485 (39%), Gaps = 76/485 (15%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++  +   + D++R +   YG+  I  P++E +D   + + +  D   K +++ 
Sbjct: 1   MNDILPEQTPVWQFVEDTVRKVLSQYGYQEIRMPVVEQTDLFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  ++LR + TA   R   E+        R +  GP+FR+E+   GR+RQF Q  V
Sbjct: 61  EDRNGDSLTLRPEGTAGCVRAAEEHGLLFNQTRRLWYTGPMFRHERPQKGRYRQFHQIGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGLHGDD 188
           +  G +    DAE+ ++ A    A+G+  +     +       RK     L        D
Sbjct: 121 ECFGMAGPDIDAELLVLTARLWRALGLCEHTRLEINSIGTSAARKEYREALVAYLSDYRD 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L++        D   + G   +++L  +     +      A         +  +L  + 
Sbjct: 181 QLDD--------DSQRRLGSNPLRILDSK--NPETQRLLVDA-------PRLDDYLDDES 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +   +L  L+                               ++S +VRGL+YY   V+E
Sbjct: 224 REHFRQLRSLLDAA-----------------------GIEYTVNSKLVRGLDYYGKTVFE 260

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            I               G++  GGRYDGLV +  G++  A GF++G+ RLI+       +
Sbjct: 261 WIT--------DSLGAQGTICAGGRYDGLVEQLGGKSTVAVGFAMGLERLIL--LLETLN 310

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADR 426
                  G V +        +++      + LR A  G+   M      +F +Q+K ADR
Sbjct: 311 LVPDSANGNVDVYVAAMGESTVAPALALGESLRDALPGVTV-MGHCGGGSFKSQMKKADR 369

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                A+I G  E + G   +K L   +                 AQ  +   +L +T++
Sbjct: 370 SGARYAVILGENEVANGTAGLKPLRSDE-----------------AQQDVAQGDLAATLE 412

Query: 487 KILQE 491
           ++L  
Sbjct: 413 ELLGR 417


>gi|145589471|ref|YP_001156068.1| histidyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047877|gb|ABP34504.1| histidyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 442

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 200/476 (42%), Gaps = 60/476 (12%)

Query: 1   MGKKTKL-------RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYS 53
           M  + K        +    RG  D    +      +   +R++   YG++ + TP++E +
Sbjct: 1   MTDQNKPEKVQKTQKINGVRGMNDLLPADAAHWAHLDHVLRDLTRAYGYEFLRTPIVEAT 60

Query: 54  DSLGKFLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRI 111
               + + +  D   K ++S +D  +G+ ++LR + TA + R V EN      P R +  
Sbjct: 61  AVFQRGIGEVTDIVEKEMYSFEDRLNGEQLTLRPEGTAAVVRSVIENNLLYEGPKRLWYT 120

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
           GP+FR+E+   GR+RQF Q  ++ +G +    DAE+ +M     + +G+K     I    
Sbjct: 121 GPMFRHERPQRGRYRQFHQFGIEALGFAGPDIDAEIILMGQRLWDELGLKGVRLEINSLG 180

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
           +           +   +K   +L      D   +     +++L  +     +        
Sbjct: 181 QANERAEHRAALIKYFEKHQSQLD----EDSRRRLLTNPLRILDSKNPEMQT-------- 228

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
              +    ++ FL  +  K  + +  L+K                         +   KI
Sbjct: 229 -LIDGAPQLLDFLGEESLKHFNAVQALLKAN-----------------------NIPCKI 264

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  +VRGL+YY   V+E +         ++    G++ GGGRYD L+ R  G+  PA G+
Sbjct: 265 NPRLVRGLDYYNLTVFEWVT--------EELGAQGTIAGGGRYDPLIERMGGKAAPACGW 316

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           ++G+ R++  +K   S      +     I  +    ++L+   +  + LR+AGI   +F 
Sbjct: 317 AMGMERVLELMKVSGSLPEAQAQCD---IFVLHQGGETLTAAMIIAERLRSAGIDTILFC 373

Query: 412 ---GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNN 463
              G S +F +Q+K AD      A+I G  E ++   Q+KDL   G++ S  +   
Sbjct: 374 PPDGQSASFKSQMKKADASGAAFAVIIGPDELAKNEAQLKDLRGTGEQKSVPLDEV 429


>gi|289207920|ref|YP_003459986.1| histidyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943551|gb|ADC71250.1| histidyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 427

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 103/499 (20%), Positives = 186/499 (37%), Gaps = 85/499 (17%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   + I +   + D +R + + YG+  I  P++E ++   + + D  D
Sbjct: 1   MKAIKSIRGMHDILPESIHVWQHLEDRLRGLLDGYGYQEIRMPVVEATELFKRSIGDVTD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              K +++ +D +G  +SLR + TA   R   ++        R + +GP+FR+E+   GR
Sbjct: 61  IVEKEMYTFEDRNGDSLSLRPEGTASCVRAGIQHGLLHNQVQRLWYLGPMFRHERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILD 176
           +RQF Q  V+  G      DAEM  M A   + +G                 +  R  L 
Sbjct: 121 YRQFHQVGVEVFGLPGPDVDAEMIAMTARLWKLLGLENVRLELNTLGTPASRVRYRDQLI 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
              E+     D++        R  D         +++L  +     +             
Sbjct: 181 AYFEQHRDSLDEEALR-----RLHD-------NPMRILDSKHPETRA---------VVAN 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++  L  +       L   +                                +  +V
Sbjct: 220 APSLMDHLDAESRTHFDSLRAHLDALGIA-----------------------YVHNPRLV 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT  V+E I               G+V  GGRYDGLV +  G+  PA G ++G+ 
Sbjct: 257 RGLDYYTHTVFEWIT--------DDLGAQGTVCAGGRYDGLVEQLGGRGTPAIGMAMGLE 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSS 414
           RL+  L++ E +         +++       + +       + LR+   G+R  +     
Sbjct: 309 RLVALLEAREDAPQPPGPDAYLVV----GGDELVGPALELAERLRSELPGLR-LVQHCGG 363

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +F +Q+K ADR     A++ GT E + G + +K L                      Q 
Sbjct: 364 GSFKSQMKRADRLGAHFALVLGTDEHAAGTVTVKPLRS----------------PGAEQS 407

Query: 475 TIPISELVSTVKKILQENK 493
            +P  EL   +++ L  + 
Sbjct: 408 AVPREELARHLEQALHASA 426


>gi|301066573|ref|YP_003788596.1| histidyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300438980|gb|ADK18746.1| Histidyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 427

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 190/476 (39%), Gaps = 61/476 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD    +     ++    R I+  Y +  I TP+ E  D   +   D  D 
Sbjct: 1   MNYQRPKGTADILPGQSERWQQVEAVARKIFAQYQYHEIRTPIFENVDVFSRSAGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K +++ +D   + ++LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYTFKDKGDRMMALRPEGTAGVVRAYVENKLYGPEHAKPYKVYYLGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR RQF Q  V+  GS +   DAE   +    LEA+G K   + I        R+     
Sbjct: 121 GRQRQFHQIGVEAFGSDSPVLDAETLALAKQLLEALGAKHLKFVINSLGDPATRQAFHAA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  + + D                 
Sbjct: 181 LVDYLTPFKDQLSE--------DSKVRLVKNPLRILDSKDKHDQE---------IVANAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ + ++    +  L++G                            ++ +T+VRG
Sbjct: 224 SILDYLTPEAQQHFDRVKTLLQGL-----------------------GIPFEVDATMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E +      ++K     + ++  GGRY+GLV    G   P  GF++G+ RL
Sbjct: 261 LDYYNHTIFEVM-----SDDKVFGGGYTTILAGGRYNGLVEELGGPETPGIGFAMGVERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++                I T+D  +D   +       +R  G   EM     +   
Sbjct: 316 MLLMQ-----GELPTAQPDAYIVTIDQGAD--QEALQMLTAIRQQGFTGEMDY-MGRKPK 367

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            Q K A++ N  L +  G  ER+ G +QIK++A G + +    +  +       Q+
Sbjct: 368 GQFKAANKANAKLVLTIGESERAAGTVQIKNMATGDQQAFPQADVLADFGKIYTQV 423


>gi|315303276|ref|ZP_07873915.1| histidyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628354|gb|EFR96848.1| histidyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 427

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 104/489 (21%), Positives = 192/489 (39%), Gaps = 67/489 (13%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +LPRG  D    E+   + +  +  ++ EN+ ++ I TP+ E+++   + + D  D  +K
Sbjct: 2   QLPRGTRDILPNEVTKWHFLETAFASVCENFQYEEIRTPIFEHTELFERGVGDSTDIVSK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRFR 126
            +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   GR R
Sbjct: 62  EMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKLYYNEPMFRYERPQGGRQR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  ++ +GS   + D E+  +       +G++     I     K       +  +  
Sbjct: 122 QFTQMGIEAIGSDDPSIDVEVISLAMAFFTRIGLRDIKLVINSLGDKESRLRHREALVSH 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +   +        +   +     +++L  +   D         N   +    ++++L+ 
Sbjct: 182 FEPHIDE----FCAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILAYLNE 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                   +   +                              +I  T+VRGL+YY    
Sbjct: 229 KSIAYFDNVQTYLNALE-----------------------IPFEIDPTMVRGLDYYNHTT 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL+  +
Sbjct: 266 FEIMSEEEGFGAK------TTLCGGGRYHGLVKEFGGPDTPGIGFGIGVERILLALEKAK 319

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                 K    + +  +    ++  K       LR   I AE      +    QLK A+R
Sbjct: 320 VLIPVKKP---LEVYVIAAQPEAELKAVTLVNKLRENRISAEKDY-LKRKLKAQLKDANR 375

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           +N    II G  E   G  Q+K++  G++ S                       L+  +K
Sbjct: 376 KNAVYTIILGEEELETGKYQLKNMETGEQESIF------------------EDSLIMVLK 417

Query: 487 KILQENKEE 495
           + L E+KEE
Sbjct: 418 EKLIESKEE 426


>gi|254479915|ref|ZP_05093163.1| histidyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214039477|gb|EEB80136.1| histidyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 428

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/495 (20%), Positives = 186/495 (37%), Gaps = 82/495 (16%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
                RG  D           +   I ++  +YG+  +  P++E +D   + + +  D  
Sbjct: 3   NIRAIRGMNDILPDVTPSWQYVETVIGSLMASYGYSEVRMPIVEQTDLFRRGVGETTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D + + ++LR + TA   R   ++   +    R +  G +FR E+   GR R
Sbjct: 63  EKEMYTFLDRNEESLTLRPEGTAGCVRAAIQHGL-LNTVQRLWYTGAMFRYERPQKGRQR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDG 177
           QF Q   +  G ++   DAE+ ++ A     +G             +       R  L  
Sbjct: 122 QFHQVGAEAFGVASPDMDAEVILLTARLWRELGIAEDVQLQLNSIGNAQSRNAYRDALVA 181

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            L +     D+            D   +     +++L  + +   +           +  
Sbjct: 182 YLRERVDALDE------------DSQRRLDSNPLRILDSKNQETQA---------VLDGA 220

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +V FL  +       L EL+                               ++  +VR
Sbjct: 221 PSLVDFLDEESAADFSRLRELLDAAGVA-----------------------YSLNPRLVR 257

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +          +    G+V GGGRYDGLV +  G++VP  GF++GI R
Sbjct: 258 GLDYYNKTVFEWVT--------DRLGAQGTVCGGGRYDGLVEQLGGKSVPGVGFAMGIER 309

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           L++ L+                +  +     + ++     + LR A  G+R  +      
Sbjct: 310 LVLLLEECGQLPPAEASAD---VYVVSFGDSAQTEALAAAEQLRDALPGLRI-VQHNGGG 365

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +F +Q+K AD+    LA+I G  E +   + IK L   ++              RV Q +
Sbjct: 366 SFKSQMKKADKSGARLALIWGDDEVAANTVSIKPLR--EQ-----------NNERVGQQS 412

Query: 476 IPISELVSTVKKILQ 490
           +  +EL  T++ +L 
Sbjct: 413 VARAELEQTLRALLA 427


>gi|85059737|ref|YP_455439.1| histidyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123725388|sp|Q2NS41|SYH_SODGM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|84780257|dbj|BAE75034.1| histidyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 424

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 98/473 (20%), Positives = 186/473 (39%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   +E      +  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPEETAFWQCVEGTLKNVLASYGYSEIRLPIVEQTPLFQRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFADRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ ++ A    A+GI+ +     +    +     
Sbjct: 117 PQKGRYRQFHQMGAEVFGQQGPDVDAELILLTARWWRALGIQEHVALELNSIGSLEACAR 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L       +D+L+E        D   +     +++L  +              +  
Sbjct: 177 YREALVAFLRQHEDRLDE--------DCRRRMHTNPMRVLDTKN---------PDIQVLL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               ++  +L  D +     L EL+                               ++  
Sbjct: 220 NDAPVLTDYLDDDSQAHFSGLCELLD-----------------------LAGIPYTVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +          +    G+V GGGRYDGLV +  G+  PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTT--------RLGSQGTVCGGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLG 412
           + RL++ ++++     +      V    +        +     + LR   + +R     G
Sbjct: 309 LERLVLLVQAVN---PDFAAAARVDAYLVAAGDGVQREALRLAEQLRDELSSLRLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              +F  Q   AD+    +A++ G  E + G + +KDLA G + +    +  +
Sbjct: 366 GG-SFKKQFGRADKHGARIALVLGESEAAAGQVVVKDLATGNQETLAQSDVAA 417


>gi|322376011|ref|ZP_08050521.1| histidine--tRNA ligase [Streptococcus sp. C300]
 gi|321278961|gb|EFX56004.1| histidine--tRNA ligase [Streptococcus sp. C300]
          Length = 426

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 102/459 (22%), Positives = 178/459 (38%), Gaps = 52/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGEGANV--KALELVQTLRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD       I  G  E   G + +K+    +E+   + 
Sbjct: 373 SADIFAAKTLITLGESEVESGQVTVKNNQTREEVQVSLD 411


>gi|308187769|ref|YP_003931900.1| Histidyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308058279|gb|ADO10451.1| Histidyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 426

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 100/480 (20%), Positives = 178/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  +  RI   ++    +YG+  I  PL+E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTALWQRIEGVLKQTLASYGYSEIRLPLVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ M+ A   +++G                   +
Sbjct: 117 PQKGRYRQFYQIGVEVFGLQGPDIDAELIMLNARWWKSLGISEHVRLELNSIGSLEARAH 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHKDVLDE------------DCKRRMYSNPMRVLDSKNPDVQQ------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  +  +    L  L+                               
Sbjct: 218 --LLNDAPQLGDYLDDESREHFSGLCALLDDA-----------------------GISYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V E +               G+V GGGRYDGLV +  G+  PA G
Sbjct: 253 VNQRLVRGLDYYNRTVIEWVT--------DSLGSQGTVCGGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       +    V +  +       S      + LR     +R  
Sbjct: 305 FAMGMERLVLLVQAVN---PEFEPTSNVDVYVIASGQGVQSAAMQLAEKLRDEAPELRLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E   G + IKDL +G++ + +     +   
Sbjct: 362 TNFGGG-NFKKQFARADKWGARVALVLGEDEVKAGQVVIKDLRRGEQQTLDQAEAAAVLR 420


>gi|311069241|ref|YP_003974164.1| histidyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869758|gb|ADP33233.1| histidyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 424

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 188/467 (40%), Gaps = 51/467 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E      +   +R+    Y +  I TP+ E+++   + + +  D 
Sbjct: 1   MAYNIPRGTQDILPGESDRWQYVEQIMRDTCRTYQYKEIRTPIFEHTELFARGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV--FPCRTYRIGPVFRNEKHGPG 123
             K +++ QD  G+ ++LR + TA   R   EN        P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFQDRKGRSLTLRPEGTAAAVRAFTENKLFANPVQPTKLYYVGPMFRYERPQTG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKI 182
           RFRQF Q  ++ +GS     DAE+  +     +  G+K     +     K       E +
Sbjct: 121 RFRQFYQFGIEAIGSKDPAIDAEVIALAMSIYQRAGLKNVKLVLNSLGDKESRTSYREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + +++E        D   +     +++L  +   D+    T            ++ 
Sbjct: 181 VKHFEPRIDEF-----CSDCQSRLYTNPLRILDCKKDRDHELMKT---------APSILE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ + +    ++ + V           EL +  E             I   +VRGL+YY
Sbjct: 227 YLNEESKAYFQKVQQYVT----------ELGIPFE-------------IDPNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +                ++ GGGRYDGLV +  G   P  GF++ I RL+ A+
Sbjct: 264 NHTAFEIMSNAEGF------GAITTLAGGGRYDGLVEQIGGPEAPGIGFAMSIERLLAAI 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            + ++     + +   ++T       +          LR AGI +E+    +K    Q K
Sbjct: 318 DAEKTELPVSQAIDCYIVTL---GEKAKDYSVSLVYKLREAGISSEIDY-ENKKMKGQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            ADR N     I G  E ++  + +KD   G++L   +     + +A
Sbjct: 374 TADRLNARFIAILGEDELAQNRINVKDAKTGEQLEVALDELIRFMKA 420


>gi|300691805|ref|YP_003752800.1| histidyl-tRNA synthetase (histidine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
 gi|299078865|emb|CBJ51526.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
          Length = 432

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 104/500 (20%), Positives = 190/500 (38%), Gaps = 83/500 (16%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    +  +     +++R++   YG+  I TP++E++    + + +  D  
Sbjct: 3   KIAGVKGMNDLLPGDAPLWEHFDNAVRSMLRAYGYQQIRTPIVEHTQLFVRGIGEVTDIV 62

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G+ ++LR + TA   R V E+      P R +  GP+FR+E+   GR+
Sbjct: 63  EKEMYSFTDSLNGEQLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHERPQRGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDG 177
           RQF Q  V+ +G +    DAE+ +M     + +G                   +R  L  
Sbjct: 123 RQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEEREAHRVDLIK 182

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE      D+            D   +     +++L  +                    
Sbjct: 183 YLEGFQDILDE------------DGKRRLYTNPLRVLDTKNPALQEMAA---------SA 221

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ +L  +  K    +  L+K                         +    I+  +VR
Sbjct: 222 PKLIDYLGDESRKHFEGVQTLLKAN-----------------------NIPYTINPRLVR 258

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E            K    G+V GGGRYD L+ +  G+  PA G+++G+ R
Sbjct: 259 GLDYYNLTVFEWTT--------DKLGAQGTVAGGGRYDPLIEQIGGKPAPACGWAMGVER 310

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSS 414
           +I  L+    +           +  +     +  +  +  + LR AG+   +     G +
Sbjct: 311 IIELLREEHLAPEPQ----GCDVYIVHQGDQAQMQALVAAERLRDAGLDVILHCSPEGRN 366

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +F +Q K AD      A+I G  E + G+ Q+K L                     AQ 
Sbjct: 367 GSFKSQFKRADASGASYAVIIGDDEVAAGVAQVKPLR--------------GDPNADAQQ 412

Query: 475 TIPISELVSTVKKILQENKE 494
           T+P  +LV  +   +  N +
Sbjct: 413 TVPSDQLVDRLIDAMVANSD 432


>gi|45442516|ref|NP_994055.1| histidyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597156|ref|YP_071347.1| histidyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108808312|ref|YP_652228.1| histidyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108811423|ref|YP_647190.1| histidyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145599495|ref|YP_001163571.1| histidyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149365338|ref|ZP_01887373.1| histidyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162420576|ref|YP_001605023.1| histidyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926037|ref|ZP_02221869.1| histidyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937162|ref|ZP_02225727.1| histidyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008604|ref|ZP_02229502.1| histidyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166212589|ref|ZP_02238624.1| histidyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399422|ref|ZP_02304946.1| histidyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421392|ref|ZP_02313145.1| histidyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423817|ref|ZP_02315570.1| histidyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170023540|ref|YP_001720045.1| histidyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186896251|ref|YP_001873363.1| histidyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218929938|ref|YP_002347813.1| histidyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229838457|ref|ZP_04458616.1| histidyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895159|ref|ZP_04510335.1| histidyl tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229899024|ref|ZP_04514168.1| histidyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901680|ref|ZP_04516802.1| histidyl tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489875|ref|ZP_06206949.1| histidine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294504560|ref|YP_003568622.1| histidyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|29427530|sp|Q8ZCT6|SYH_YERPE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|81691698|sp|Q668A0|SYH_YERPS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|122980231|sp|Q1CK90|SYH_YERPN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123245686|sp|Q1C5I9|SYH_YERPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166228631|sp|A4TMT6|SYH_YERPP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229470706|sp|B2K9P9|SYH_YERPB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229470707|sp|A9R801|SYH_YERPG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229470708|sp|B1JS06|SYH_YERPY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|45437381|gb|AAS62932.1| histidyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51590438|emb|CAH22078.1| histidyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108775071|gb|ABG17590.1| histidyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108780225|gb|ABG14283.1| histidyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115348549|emb|CAL21489.1| histidyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145211191|gb|ABP40598.1| histidyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149291751|gb|EDM41825.1| histidyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162353391|gb|ABX87339.1| histidyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165915025|gb|EDR33637.1| histidyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922241|gb|EDR39418.1| histidyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992986|gb|EDR45287.1| histidyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206520|gb|EDR51000.1| histidyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960881|gb|EDR56902.1| histidyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051926|gb|EDR63334.1| histidyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057987|gb|EDR67733.1| histidyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169750074|gb|ACA67592.1| histidyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186699277|gb|ACC89906.1| histidyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229681609|gb|EEO77703.1| histidyl tRNA synthetase [Yersinia pestis Nepal516]
 gi|229687969|gb|EEO80041.1| histidyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694823|gb|EEO84870.1| histidyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701921|gb|EEO89944.1| histidyl tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262362445|gb|ACY59166.1| histidyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262366548|gb|ACY63105.1| histidyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270338379|gb|EFA49156.1| histidine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294355019|gb|ADE65360.1| histidyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320016014|gb|ADV99585.1| histidyl tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 424

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 99/477 (20%), Positives = 181/477 (37%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK---------RNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ ++ A    A+GI                  +
Sbjct: 117 PQKGRYRQFHQLGAEVFGLPGPDIDAELILLTARWWRALGIFEHVKLELNSIGSLAARAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YREALVAFLEQHVEVLDE------------DCKRRMYSNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +    +  +L  + ++    L EL+            L                  
Sbjct: 216 QQLLDDAPKLSDYLDEESKQHFAGLCELLDKASIPYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTHS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++ +   + +    V    +     + S   +  + LR A   ++  
Sbjct: 305 FAMGLERLVLLVQAVNA---DFQVPATVDAYVISSGEGAQSAAMLLAESLRDALPTLKIM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              G   N   Q   AD+    +A++ G  E +   + +KDL  G++ +    +  +
Sbjct: 362 TNYGGG-NVKKQFTRADKWGARVALMLGESEVAAQQVVVKDLRNGEQETLAQADVAA 417


>gi|319400957|gb|EFV89176.1| histidyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 424

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 96/465 (20%), Positives = 187/465 (40%), Gaps = 48/465 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++      I + +  + E Y +  I TP+ E ++   + + D  D   
Sbjct: 2   IKMPRGTQDILPQDSAKWRYIENRLHTLMELYNYKEIRTPIFESTELFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + ++LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSLTLRPEGTAAVVRSYIEHKMQGDPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+ +G+   + DAE+  M+    E+ G+K    H+ +    I D    K    
Sbjct: 122 RQFNQFGVEAIGAENPSIDAEILAMVMHIYESFGLK----HLKLVINSIGDSESRKEYNE 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              K  E +I     D   +     +++L  +   D             +    +  +L+
Sbjct: 178 ALVKHFEPVIDTFCSDCQSRLHTNPMRILDCKIDRDKE---------AVKNAPRITDYLN 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D +    ++   +                          +        +VRGL+YYT  
Sbjct: 229 NDSKSYYKQVKLHLDNL-----------------------NISYVEDPNLVRGLDYYTHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E ++  P     +      ++ GGGRY+GL+    G +    GF++ I RL++AL   
Sbjct: 266 AFELMIDNP-----EYDGAITTLCGGGRYNGLLQLLDGPDETGIGFALSIERLLMALDEE 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             S +  ++     +  +    D+          LR  GI+ +     ++    Q+K AD
Sbjct: 321 GISLDVSEDFD---LFVVTMGEDADRYAVKLINDLRRNGIKVDKDY-LNRKIKGQMKQAD 376

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           R N    ++ G  E     + +K++  G+  + ++    ++ + R
Sbjct: 377 RLNAKYTVVIGDQELENNEIGVKNMISGETENVQLDELINYFKNR 421


>gi|170725902|ref|YP_001759928.1| histidyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|229558741|sp|B1KKJ3|SYH_SHEWM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|169811249|gb|ACA85833.1| histidyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 424

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 114/503 (22%), Positives = 191/503 (37%), Gaps = 93/503 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R     YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKLETVLRETVAAYGYSEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFDDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ M+ A   E +GIK           D      
Sbjct: 117 PQKGRYRQFNQFGVEVYGIGTADVDAEVLMLSARLWEKLGIKEHVTLELNTLGDPAERAT 176

Query: 171 NRKILDGILEKI--GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
            R  L   LE+    L  + +       LR +D  +      V+ LL +           
Sbjct: 177 YRSALIEFLEQFKEQLDEESQRRMYTNPLRVLDTKNP----EVQALLVD----------- 221

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
                      ++ FL  +       L EL+                            +
Sbjct: 222 --------APELMDFLGEESRAHFSHLCELLDA-----------------------VGIQ 250

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
             I+  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G++ PA
Sbjct: 251 YVINPRLVRGLDYYNRTVFEWVTSS--------LGSQGTVLAGGRYDGLVEQLGGKDTPA 302

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIR 406
            GF++G+ R+++    LE+          V +        S  +     Q LR+    +R
Sbjct: 303 VGFAMGLERIVL---LLETLELTSDIPSTVDVYVTAMGDTSKIEAIKIAQTLRSELPNLR 359

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             M      NF  Q+K AD+    +A++ G  E +   + +K L + KE           
Sbjct: 360 V-MSHCGGGNFKKQMKRADKSGAQIALVIGEDELANNQVAVKYLREKKE----------- 407

Query: 467 REARVAQITIPISELVSTVKKIL 489
                 Q  +    L + + K +
Sbjct: 408 ------QELVARDGLATYIAKQI 424


>gi|119489706|ref|ZP_01622465.1| histidyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119454443|gb|EAW35592.1| histidyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 432

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 102/476 (21%), Positives = 179/476 (37%), Gaps = 59/476 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    E+     +    R I     +  I TP+ E +    + + +  D   
Sbjct: 4   IQAIRGTRDILPDEVGYWQWVESIARTILGKANYLEIRTPIFEQTSLFERGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++  D   + I+LR + TA + R   EN   +    R +  GP+FR E+   GR RQ
Sbjct: 64  KEMYTFSDRGDRSITLRPEGTAGVVRSYIENKLHVGGVQRLWYTGPMFRYERPQAGRQRQ 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKILDGILEKIG 183
           F Q  V+ +GS+   AD E+  +  + L+A+G+K      +    + +R      L    
Sbjct: 124 FHQLGVEVLGSNNPRADVEVIAIATNILQALGLKNLHLDLNSVGDLEDRGRYRQALIDYL 183

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D+L+         D  D+     +++L  + +              ++    ++ +
Sbjct: 184 TPYKDELDA--------DSQDRLSRNPLRILDSKDKRTQE---------ITQNAPSILDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L         ++ +L+ G                             ++  +VRGL+YYT
Sbjct: 227 LGEQSRTHFDKVQQLLTGLE-----------------------ISYTLNPRLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E I                +V GGGRYDGLV    G + PA G+++G+ RLI+   
Sbjct: 264 HTAFEII--------SDDLGAQATVCGGGRYDGLVQELGGPDTPAVGWAMGLERLIL--- 312

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                         +    +     +  +  +  Q LR A    E+ L S   FG Q K 
Sbjct: 313 --LLQQLQNLPQSELDFYIVSRGESAEPQATILAQKLRQAEFSVEVDL-SGSAFGKQFKR 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           ADR      ++ G  E     + +K L  G++      +  +  E   ++I    S
Sbjct: 370 ADRSGAVACLVLGDAEAENQTVNLKWLKTGEQDKIPQSDLLTKTEEIRSKIQASRS 425


>gi|304407553|ref|ZP_07389205.1| histidyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343504|gb|EFM09346.1| histidyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 416

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 90/466 (19%), Positives = 174/466 (37%), Gaps = 52/466 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P G  D     +     +    R+I   + F  I TP+ E ++   + + +  D 
Sbjct: 1   MAFQKPPGTQDLLPGAVERWQFVESKARDICRRFNFREIRTPIFEATELFQRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + ++LR + TA   R   EN         + Y IGP+FR E+   GR
Sbjct: 61  VEKEMYTFTDRGNRSLTLRPEGTAGAVRAFVENKLYGEPDLTKLYYIGPMFRYERAQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q  V+ +G+     DAE+  +       VG+K     I       +     +  L
Sbjct: 121 YRQFHQFGVEALGAVDPALDAEVIALGYTFYTEVGLKGVRVEINSVGTPAVRAAFREKLL 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +        L   D   +     +++L  +    +            E    ++  L
Sbjct: 181 SFLE----PKRSLLCKDCQSRIDRNPLRVLDCKVDQAHF-----------EGAPSILESL 225

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + +    ++   +                          +   +I+  +VRGL+YYT 
Sbjct: 226 DEECQTHFDKVKTYLSD-----------------------MNIPFEINPRLVRGLDYYTH 262

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E         + +      +VGGGGRY+GLV+   G + P  G  +G+ R ++ L+ 
Sbjct: 263 TAFE--------YKAEGIGAIDTVGGGGRYNGLVAEVGGPDQPGVGLGLGLERTVMLLEH 314

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +     +     +    +     +  +       LR++G+  E      +    Q+K A
Sbjct: 315 QQ---TELPNATAIDAYVVALGEAAERETSKLIYQLRSSGLSVERDY-QGRKMKAQMKSA 370

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           DR       I G  E +RG + +K++A G++    + +     + +
Sbjct: 371 DRLQARYTAILGDDELARGEIALKEMATGEQRFVSLDSLAEAIKKQ 416


>gi|221066035|ref|ZP_03542140.1| histidyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220711058|gb|EED66426.1| histidyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 434

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 99/476 (20%), Positives = 190/476 (39%), Gaps = 60/476 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  KL A   +G  D    +          +R++   + +  I TP++E +    + L
Sbjct: 1   MAKNEKLTA--VKGMNDILPPDSARWEWFEAKVRDLMGRFAYRNIRTPIVEPTALFVRGL 58

Query: 61  PD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K ++S +D  +G+ ++LR + TA + R V EN        R + IG +FR+E
Sbjct: 59  GEVTDIVEKEMYSFEDKLNGEHLTLRPEGTAGVVRSVVENNLLYEGGKRLFYIGQMFRHE 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR+RQF Q  V+ +G +    DAE+ ++ A   + +GI              +   
Sbjct: 119 RPQRGRYRQFHQVGVEAMGFAGPELDAEVILLAAQLWKELGI------------DGVRLE 166

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  +G   + K +   ++       +    +  + +                ++ +    
Sbjct: 167 LNSLGQPEERKAHRAALIAYFEQHTEVMDEEAKRRMYSNPLRVLDTKNPAMQDMVN-AAP 225

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L    +  +  + E++                               ++  +VRG
Sbjct: 226 KLMDYLGDASKAHLKAVQEILDANGVA-----------------------WSLNPRLVRG 262

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           ++YY   V+E I          K    G++ GGGRYD L+    G+  PA G+ +G+ R+
Sbjct: 263 MDYYNLTVFEFIT--------DKLGSQGTICGGGRYDYLIEEIGGKPAPAVGWGMGVERV 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS---- 414
           +  LK + +            +  +  D+ +L +     Q LR AG+  +M   +     
Sbjct: 315 LEVLKEVGAEIPQPAA----DVYAIIPDASALPQVFKTVQQLRAAGVAVQMHAAAGGSAE 370

Query: 415 --KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESW 466
              +  +Q K AD      A+I G  E ++G + +K L  G+  +L R + +   W
Sbjct: 371 GMGSMKSQFKKADGSGARFALIFGADELAQGKVTVKSLRDGEGQQLQRALADVALW 426


>gi|167753701|ref|ZP_02425828.1| hypothetical protein ALIPUT_01982 [Alistipes putredinis DSM 17216]
 gi|167658326|gb|EDS02456.1| hypothetical protein ALIPUT_01982 [Alistipes putredinis DSM 17216]
          Length = 447

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 137/480 (28%), Positives = 222/480 (46%), Gaps = 55/480 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRP 66
           +  +P+G  D    E+  R  I D IR+++  +GF P+ETP +E     LGK+  + D  
Sbjct: 4   KPSIPKGTRDFSPLEMMRRQYIFDKIRDVFRTFGFGPLETPAMENLSTLLGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------SLRYDLTAPLARYVAENFDTIVFPCRTYR 110
            K +F + +          + +          LRYDLT P ARYV ++   I FP + Y+
Sbjct: 62  -KLLFKILNSGDYAAGLNDEELRTASRICEKGLRYDLTVPFARYVVQHQSEIAFPFKRYQ 120

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
           I PV+R ++   GR+R+F QCDVD +G+ +   + E+  ++      +GI   +  + +N
Sbjct: 121 IQPVWRADRPQKGRYREFYQCDVDVIGTRSLLCEVELIQIVERVFRTLGI---NVSLKVN 177

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           NRKIL GI E IG       ++ + +  AIDKL+K GL+ VK  L E             
Sbjct: 178 NRKILYGIAETIG-----HADKMIDITVAIDKLEKIGLEAVKAELTER------------ 220

Query: 231 NLTSEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
            + S+ I+ +   L +  D E+ +  L +++  +  G +G +E+  I   V + G     
Sbjct: 221 GIGSDAIEKLQPILELTGDNERKLAVLRDVIGASAVGLEGISEMETIFGYVNRLGV-ELP 279

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           I++  ++ RGL YYTG ++E          K      GS+ GGGRYD L   F   N+  
Sbjct: 280 IELDFSLARGLNYYTGAIFEV---------KALDFAIGSICGGGRYDDLTGIFGMPNMSG 330

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G S G  R+   +  L     ++     V+   +    +         Q +R AGI AE
Sbjct: 331 VGISFGADRIYDVMTGLGLFPADLGCAARVMFANLGEAEEH--ASLKLLQEVRAAGIPAE 388

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +   + K    Q++YA+RR  P  +I G+ E    +  IKD+  G++             
Sbjct: 389 ICPENGK-MKKQMEYANRRGIPCVVIVGSRELEERVATIKDMTSGEQTQVPFTRLAEALR 447


>gi|332520806|ref|ZP_08397266.1| histidyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332043336|gb|EGI79532.1| histidyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 460

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 144/481 (29%), Positives = 228/481 (47%), Gaps = 54/481 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +++  RN I  +I++ +E +GF PIETP  E SD+L GK+  + D  
Sbjct: 4   KPSIPKGTRDFNPEQVAKRNYIFSTIKSQFETFGFQPIETPSFENSDTLMGKYGEEGDRL 63

Query: 65  ---RPNKGVF--SLQD-----DDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCR 107
                N G +   + D      +   ++       LRYDLT P ARYV ++ + I FP +
Sbjct: 64  IFKILNSGDYLSKVNDDLYAEKNSNKVTPKISEKALRYDLTVPFARYVVQHQNDIEFPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y++ PV+R ++   GRFR+F QCD D VGS +   + E   +  +   A+G+K     I
Sbjct: 124 RYQMQPVWRADRPQKGRFREFYQCDADVVGSDSLWQEVEFVQLYDNVFTALGLKG--TTI 181

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL GI E IG          +    A+DKLDK G + VK  +       SG   
Sbjct: 182 NINNRKILSGIAEVIGASDK-----LIDFTVALDKLDKIGEEKVKEEMLSKAIPQSG--- 233

Query: 228 KGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
                    ID +    S+    +  +  L +++  +  G+KG  EL  I+  +   G  
Sbjct: 234 ---------IDKLQPLFSLAGSFDAQIESLKDILSTSEEGKKGIEELEFINNAINTLGLK 284

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           S ++++  T+ RGL YYTG ++E            K V  GS+GGGGRYD L   F  +N
Sbjct: 285 SAKLQLDVTLARGLNYYTGAIFEV--------SAPKGVKMGSIGGGGRYDDLTGIFGLKN 336

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           V   G S G+ R+ + ++ L      I +   VL      +    S      + LR  G+
Sbjct: 337 VSGVGISFGLDRIYLVIEELGLFPETITKSTEVLFINFGDNEALFS--LKAIKFLRENGV 394

Query: 406 RAEMFLG---SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            AE++     + K+   Q+ YA++RN P  ++ G  E +     +K++  G +   ++  
Sbjct: 395 NAELYPDKITNGKHMKKQMNYANKRNIPFVVLVGEEEMNSEAYTLKNMNTGDQTKLDLSA 454

Query: 463 N 463
            
Sbjct: 455 L 455


>gi|288927731|ref|ZP_06421578.1| histidine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330565|gb|EFC69149.1| histidine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 456

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 135/495 (27%), Positives = 217/495 (43%), Gaps = 66/495 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKF 59
           M K       +P+G  D    E+  RN I D+I+++Y  YG+  IETP +E   +L GK+
Sbjct: 1   MNK-----PSIPKGTRDFSPAEMAKRNYIFDTIKDVYALYGYQQIETPSMETLQTLMGKY 55

Query: 60  LPDEDRPNKGVFSLQDDD-------------GQWI---------SLRYDLTAPLARYVAE 97
             + D   K +F + +                  +          LRYDLT P ARYV  
Sbjct: 56  GEEGD---KLLFKILNSGDFIGKVPAEEFVSDNVLKLAAKICEKGLRYDLTVPFARYVVM 112

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           + D +  P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++      
Sbjct: 113 HRDELQMPFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELVQIIDTVFTK 172

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
            GI   +  I +NNRKIL GI E IG          + +  AIDKLDK G++ V   +  
Sbjct: 173 FGI---NVQIKLNNRKILAGIAEYIGQPDK-----IVDITVAIDKLDKIGVEAVNAEMLA 224

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVI 275
                         ++ + +D +   L++     + +  + + +  +  G KG  E   I
Sbjct: 225 N------------GISQDAVDKLQPILTMSGTNVEKLETIAQTIATSEIGVKGVEETRFI 272

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
            E +   G   N +++  T+ RGL YYTG ++E          K K V  GS+ GGGRYD
Sbjct: 273 LEKIAAVG-LKNELQLDLTLARGLNYYTGAIFEV---------KAKDVAIGSITGGGRYD 322

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            L   F    +   G S G  R+   L +L+    N  +   VL                
Sbjct: 323 NLTGIFGMPGLSGVGISFGADRIYDVLNTLDLYPQNATQGTEVLFINFGETES--DYCLP 380

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
               +R AGI  E++   +K    Q+ YA+ +  P  ++ G  E S+G + +K++  G +
Sbjct: 381 IASQVRAAGISVELYPDCAK-MKKQMAYANAKGIPFVVLAGESEISQGKVTLKNMLTGDQ 439

Query: 456 LSREIKNNESWREAR 470
                +   +   ++
Sbjct: 440 QLVSAEELIAKITSK 454


>gi|239631395|ref|ZP_04674426.1| histidyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239525860|gb|EEQ64861.1| histidyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 427

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 107/476 (22%), Positives = 190/476 (39%), Gaps = 61/476 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD    +     ++    R I+  Y +  I TP+ E  D   +   D  D 
Sbjct: 1   MNYQRPKGTADILPGQSERWQQVEAVARKIFAQYQYHEIRTPIFENVDVFSRSAGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K +++ +D   + ++LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYTFKDKGDRMMALRPEGTAGVVRAYVENKLYGPEHAKPYKVYYLGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR RQF Q  V+  GS +   DAE   +    LEA+G K   + I        RK     
Sbjct: 121 GRQRQFHQIGVEAFGSDSPVLDAETLALAKQLLEALGAKHLKFVINSLGDPATRKAFHAA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  + + D                 
Sbjct: 181 LVDYLTPFKDQLSE--------DSKVRLVKNPLRILDSKDKHDQE---------IVANAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ + ++    +  L++G                            ++ +T+VRG
Sbjct: 224 SILDYLTPEAQQHFDRVKTLLQGL-----------------------GIPFEVDATMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E +      ++K     + ++  GGRY+GLV    G   P  GF++G+ RL
Sbjct: 261 LDYYNHTIFEVM-----SDDKVFGGGYTTILAGGRYNGLVEELGGPETPGIGFAMGVERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++                I T+D  +D   +       +R  G   EM     +   
Sbjct: 316 MLLMQ-----GELPTAQPDAYIVTIDQGAD--QEALQMLTAIRQQGFTGEMDY-MGRKPK 367

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            Q K A++ N  L +  G  ER+ G +QIK++A G + +    N  +       Q+
Sbjct: 368 GQFKAANKANAKLVLTIGESERAAGTVQIKNMATGDQQAFPQANVLADFGKIYTQV 423


>gi|270293497|ref|ZP_06199699.1| histidyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270274964|gb|EFA20824.1| histidyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 453

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 149/486 (30%), Positives = 217/486 (44%), Gaps = 61/486 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIREVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGLTDEELLSRNAPRLACKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRK+L GI E IG          + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKVLSGIAEIIGESDK-----IVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS   E+ +  L E++  +  G KG  E   I   ++  
Sbjct: 227 ------GISDEAIAKLQPIILLSGSNEEKLATLKEVLAASETGLKGVEESEFILSTLKNL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  L+           +L         + S        +R 
Sbjct: 331 MSGVSGVGISFGADRIFDVLNQLDLYPKEAVNGTQLLFINFGEKEAAFS--MNVLTEVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  +SK    Q+ YA+ +  P   + G  E + G + +K++  G++     + 
Sbjct: 389 AGIRAEIFPDASK-MKKQMGYANSKAIPFVALVGENEMNEGKVTLKNMETGEQKMVTPQE 447

Query: 463 NESWRE 468
             S  +
Sbjct: 448 LVSELK 453


>gi|189202682|ref|XP_001937677.1| histidyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984776|gb|EDU50264.1| histidyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 520

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 132/498 (26%), Positives = 217/498 (43%), Gaps = 41/498 (8%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           MGK+ K      ++P+G  D   ++  +R+R+  ++  +++ +G   ++TP+ E  + L 
Sbjct: 55  MGKEDKSKSFNLKVPKGTRDWTGEDAALRDRLFQTVTEVFKRHGATTLDTPVFELKEILS 114

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
               ++   +K ++ LQD  G+  SLRYDLT PLAR++A N     F             
Sbjct: 115 GKYGED---SKLIYDLQDQGGELCSLRYDLTVPLARWLAMNPSVQSFKRYQIAKVYRRDQ 171

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
                GR R+F QCD D  GS          + +   +         Y I IN+RKILDG
Sbjct: 172 PAMTKGRMREFYQCDFDIAGSYDTMIPDAEVLKITTDVFDALDW-GSYTIKINHRKILDG 230

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           + +  G+  +        +  A+DKLDK     VK  +                L +E  
Sbjct: 231 LFKAAGVKEE----LIRPISSAVDKLDKLPWPEVKKEME------------TKGLPTEVA 274

Query: 238 DIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           D +  ++       + E     E++  +    +G  E+ ++   +   G    RI    +
Sbjct: 275 DKIGEWVQRKGGDDIIEFLKTDEVLSKSEDISQGVREMELLFAYLDAFGSRK-RISFDLS 333

Query: 295 IVRGLEYYTGCVYEAIL--GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
           + RGL+YYTG +YE +     P +  +Q+ +  GSV  GGRYD LV  F G+ +P  G S
Sbjct: 334 LARGLDYYTGLIYEVVTEGSAPRVQGQQQEIGVGSVAAGGRYDQLVGMFSGKPIPCVGIS 393

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFL 411
            GI R+I  +K+   ST   K++   ++       +  L++     Q L  AGI+AE   
Sbjct: 394 FGIDRIISIMKARGQSTQRAKDVDAFVMAFGGKGFTGMLTERMQVAQELWAAGIKAEFSY 453

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
                   Q K A+    PLA+I G  E   G ++IK L    E            +   
Sbjct: 454 KLKPKVQQQFKQAEVAGVPLAVILGEDELKEGKIKIKVLGIKDE-----------NDPEK 502

Query: 472 AQITIPISELVSTVKKIL 489
             + +  S +V+ ++K L
Sbjct: 503 DGVLVDRSNMVTEIQKRL 520


>gi|260776632|ref|ZP_05885527.1| histidyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607855|gb|EEX34120.1| histidyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 422

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 109/481 (22%), Positives = 187/481 (38%), Gaps = 73/481 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG  DC   +  +  ++ ++++N+   YG+  +  P++E +    + +
Sbjct: 1   MAK----KIQAIRGMNDCLPTQSPLWQKLENAVKNVISAYGYSEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGDSLTLRPEGTAGCVRSCIENSLIDRSEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSLEDRAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     DD            D   +     +++L  +             
Sbjct: 177 YRTALIAFLEQHIDVLDD------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+            L                  
Sbjct: 216 QAILGDAPRLSDYLGEESKQHFAGLCELLDAAGIEYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE +         V +  +     ++       ++LR    GIR  
Sbjct: 305 FAMGLERLVLMLETLELTDVRRS----VDVYMVTAGEGTMMAGMKLAELLREQVPGIRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  Q K AD+    +A++ G  E +   + +KDL  G + +    +  +   
Sbjct: 360 MNHFGGGNFKKQFKRADKVGAAVALVLGENEVADNTVVLKDLIGGTQETYGQADVAAKLA 419

Query: 469 A 469
            
Sbjct: 420 E 420


>gi|226328004|ref|ZP_03803522.1| hypothetical protein PROPEN_01895 [Proteus penneri ATCC 35198]
 gi|225203708|gb|EEG86062.1| hypothetical protein PROPEN_01895 [Proteus penneri ATCC 35198]
          Length = 427

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 99/472 (20%), Positives = 180/472 (38%), Gaps = 69/472 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    + R+  +I ++++ I   YGF  I TP++E++    + + +  D  
Sbjct: 4   KIQAIRGMNDYLPADTRVWQKIENTLKQILAGYGFSEIRTPIVEHTPLFQRAIGEVTDVV 63

Query: 67  NKGVFSLQDDDGQ--WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            K +++  D       ++LR + TA   R   E+        R + +GP+FR E+   GR
Sbjct: 64  EKEMYTFTDRGEDAQSLTLRPENTAGCVRAGIEHGLLYNQEQRLWYLGPMFRYERPQKGR 123

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKIL 175
           +RQF Q   +  G      DAE+ M+ A   +A+G                     R+ L
Sbjct: 124 YRQFHQLGAEVFGLQGPDIDAELIMLTARWWKALGIAEHVTLELNSIGSLEARAKYREAL 183

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
              LE+     D+            D   +     +++L  +     +            
Sbjct: 184 VAFLEQHVDKLDE------------DCKRRMYSNPLRVLDSKNPEIQT---------LLN 222

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               +  +L  +       L  L+                              +++  +
Sbjct: 223 DAPELFDYLDDESRAHFDGLCALLDA-----------------------VGITYRVNQRL 259

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   V+E +               G+V  GGRYDGLV +  G   PA GF++G+
Sbjct: 260 VRGLDYYNRTVFEWVTSA--------LGSQGTVCAGGRYDGLVKQLGGHPTPAVGFAMGM 311

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGS 413
            R+I+ ++++      + +     +        S S   M  + +R     +R     G+
Sbjct: 312 ERMILLVQAVN--PEFVADTNVADVYLASFGEKSQSAALMLAEEIRDQLPTLRLMTNHGN 369

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             NF  QL  AD++   +A+I G  E + G + +KDL  G++      +   
Sbjct: 370 G-NFKKQLGRADKQGAKIALILGEDEINAGTVAVKDLRSGEQTIVARNDLAQ 420


>gi|310764773|gb|ADP09723.1| hypothetical protein EJP617_00420 [Erwinia sp. Ejp617]
          Length = 441

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 100/470 (21%), Positives = 176/470 (37%), Gaps = 68/470 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    E  +  R+   ++ +  +YGF  I  P++E +    + + +  D  
Sbjct: 20  NIQAIRGMNDYLPAETAVWQRVEQILKQVLSSYGFSEIRMPIVEQTPLFKRAIGEVTDVV 79

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+   GR+R
Sbjct: 80  EKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYERPQKGRYR 139

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDG 177
           QF Q   +  G      DAE+ MM A   +A+G                   N R  L  
Sbjct: 140 QFHQIGAEVFGLQGPDIDAELIMMTARWWKALGIADHVRLELNSIGSLEARANYRHALVA 199

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE+     D+            D   +     +++L  +                    
Sbjct: 200 FLEQHVEVLDE------------DCKRRMYSNPLRVLDSKN---------PDIQALLNDA 238

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  +L  +  +    L   +       +    L                       VR
Sbjct: 239 PTLGDYLDDESREHFAGLCRQLDAAGIAYRVNQRL-----------------------VR 275

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ R
Sbjct: 276 GLDYYNRTVFEWVT--------DSLGAQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLER 327

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           L++ ++++       +    V +  +       S   +  + LR A   ++  M      
Sbjct: 328 LVLLVQAVN---PEFEPTRVVDVYVIASGQGVQSAALLLAEQLRDALPELK-LMSNFGGG 383

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           NF  Q   AD+    +A++ G  E + G L  KDL  G++ +   ++  +
Sbjct: 384 NFKKQFARADKWGARIALVLGEDEVANGQLVFKDLRNGEQQTLAQRDAAT 433


>gi|269792195|ref|YP_003317099.1| histidyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099830|gb|ACZ18817.1| histidyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 423

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 102/460 (22%), Positives = 181/460 (39%), Gaps = 50/460 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              PRG  D    E      ++   R + +++G+  +  P+ E+++   + + D  D   
Sbjct: 4   IRAPRGTKDVMPDESWKWAYVMSVFRGVADDFGYREVHLPIFEHTELFCRGIGDTTDVVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D  G+ I+LR +LTA + R   E+       P + + +GP+FR E+   GR+R
Sbjct: 64  KEMYTFTDRGGRSITLRPELTASMVRAYLEHDLRNQQQPVKLWSVGPMFRYERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK-IGLH 185
           QF Q DV+ +GS     D E+     +    +G+   +  +          +  K +   
Sbjct: 124 QFWQVDVEALGSQDPMVDLEVIGFSLELYRRLGLSNLEVVLNSVGCPKCRPVHRKALTDF 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              KL+      R      +F    +++L  +                +E    M   L 
Sbjct: 184 LGAKLDGLCETCR-----GRFHRNPLRILDCKN---------PDCKALTEDAPAMTDHLC 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +     H L + +    A  K    L                       VRGL+YYT  
Sbjct: 230 DECRDHFHALLKGLDAAGAVVKLDKRL-----------------------VRGLDYYTKT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            YE +                +V GGGRYD L     G  VP  GF+ G+ R+++ ++S 
Sbjct: 267 AYEIL--------SGDLGAQNAVCGGGRYDHLAEAIGGPFVPGVGFASGVERIVITMESQ 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +   +      + T   + +         + LR  G+R++M   S K+F  Q+K A 
Sbjct: 319 G-CSFGQEPSIDAFVVTASPEMNVRLAASALLKGLRALGVRSDMDY-SGKSFKAQMKLAS 376

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +RN P   I G  E  R ++ +KD+  G++    + ++  
Sbjct: 377 QRNAPWVCIIGDEELLRSVVTLKDMGSGEQTQVPLGDSAE 416


>gi|220906685|ref|YP_002481996.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782326|sp|B8HMM0|SYH_CYAP4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|219863296|gb|ACL43635.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 429

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 105/457 (22%), Positives = 183/457 (40%), Gaps = 52/457 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D   +EI    R+    R I +   +  I TP+ E +    + + +  D   
Sbjct: 4   IQASRGTRDILPEEIVYWQRVEAMARQILQRAAYQEIRTPMFEQTALFERGIGEATDIVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R + E+         R +  GP+FR E+   GR R
Sbjct: 64  KEMYTFLDRGERSLTLRPEGTAGVVRALIEHKLFAQGGVQRLWYTGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+ +GS+   ADAE+  +  D L+ + +   D+ + +N+    +   ++     
Sbjct: 124 QFHQLGVEVLGSADPRADAEVIAIATDLLQQLRLT--DWTLMLNSVGNQED-RQRYRQAL 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            D L      L   D  ++     +++L  + +               +Q   ++++L  
Sbjct: 181 VDYLTPYQAELD-PDSQERLHRNPLRILDSKDQRTQE---------ICQQAPQILNYLGE 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              +    + + +       +  + L                       VRGL+YYT   
Sbjct: 231 TSRQHFDRVQQSLTDLGIPYELNHRL-----------------------VRGLDYYTHTA 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E                  +V GGGRYD LV+   G + PA G++IG+ RLI+ L+   
Sbjct: 268 FEFQTTE--------LGAQATVCGGGRYDRLVTELGGPDTPAVGWAIGLERLILLLQHQN 319

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            S     +        +     +  +  +  Q LR  G   E+ L S   FG QLK ADR
Sbjct: 320 ISYEAKPD-----FYLVAKGEVAEPQALILAQKLRHHGFVVELDL-SGSAFGKQLKRADR 373

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              PL +I G  E     +Q+K LA G++      + 
Sbjct: 374 SGAPLCLILGDAEAEAQTVQLKWLASGEQEVLSQTDL 410


>gi|197285699|ref|YP_002151571.1| histidyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227356210|ref|ZP_03840599.1| histidyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|229558705|sp|B4EZT2|SYH_PROMH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|194683186|emb|CAR43824.1| histidyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227163674|gb|EEI48590.1| histidyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 427

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 99/472 (20%), Positives = 179/472 (37%), Gaps = 69/472 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    + R+  +I ++++ I   YGF  I TP++E++    + + +  D  
Sbjct: 4   KIQAIRGMNDYLPADTRVWQKIENTLKQILAGYGFSEIRTPIVEHTPLFQRAIGEVTDVV 63

Query: 67  NKGVFSLQDDDGQ--WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            K +++  D       ++LR + TA   R   E+        R + +GP+FR E+   GR
Sbjct: 64  EKEMYTFTDRGEDAQSLTLRPENTAGCVRAGIEHGLLYNQEQRLWYLGPMFRYERPQKGR 123

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKIL 175
           +RQF Q   +  G      DAE+ M+ A   +A+G                     R+ L
Sbjct: 124 YRQFHQLGAEVFGLQGPDIDAELIMLTARWWKALGIAEHVTLELNSIGSLEARAKYREAL 183

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
              LE+     D+            D   +     +++L  +     +            
Sbjct: 184 VAFLEQHVDQLDE------------DCKRRMYSNPLRVLDSKNPEIQT---------LLN 222

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               +  +L  +  +    L  L+                              +++  +
Sbjct: 223 DAPELFDYLDDESREHFDGLCALLDA-----------------------VGITYRVNQRL 259

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   V+E +               G+V  GGRYDGLV +  G   PA GF++G+
Sbjct: 260 VRGLDYYNRTVFEWVTSA--------LGSQGTVCAGGRYDGLVKQLGGHPTPAVGFAMGM 311

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGS 413
            R+I+ ++++      + +     +       +S S   M  + +R     +R     G 
Sbjct: 312 ERMILLVQAVN--PEFVADTHVADVYLASFGDNSQSAALMLAEEIRDQLPTLRLMTNHGK 369

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             NF  QL  AD+    +A+I G  E + G + +KDL  G++          
Sbjct: 370 G-NFKKQLGRADKHGAKIALILGEDEINAGTVAVKDLRSGEQTIVSRSELAQ 420


>gi|148998081|ref|ZP_01825594.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168575992|ref|ZP_02721897.1| histidyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307068738|ref|YP_003877704.1| histidyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147756091|gb|EDK63134.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183578088|gb|EDT98616.1| histidyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306410275|gb|ADM85702.1| Histidyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 429

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 180/461 (39%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E  +M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVTL-PIENALDVYIAVLGEGANI--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFVAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|324989694|gb|EGC21638.1| histidine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 426

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 94/463 (20%), Positives = 170/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GS+    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSNNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSTYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+    V +  +   ++         Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV-ELPIETALDVYVAVLGPGANGR--ALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADTFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQIQE 415


>gi|312889997|ref|ZP_07749541.1| histidyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311297529|gb|EFQ74654.1| histidyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 458

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 145/480 (30%), Positives = 229/480 (47%), Gaps = 59/480 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR 65
           ++  +PRG  D    E+  RN I D+I++++  YG+  IETP +E   +L GK+  + D 
Sbjct: 4   IKPSVPRGTRDFSPTEMVKRNYIFDTIKSVFRKYGYQQIETPAMENLSTLMGKYGDEGD- 62

Query: 66  PNKGVFSLQDDDG----------------------QWISLRYDLTAPLARYVAENFDTIV 103
             K +F + +                            +LRYDLT P ARYV  + + I 
Sbjct: 63  --KLIFKILNSGDFLSKVDAQKLSAHNSQQIIADISEKALRYDLTVPFARYVVMHQNEIT 120

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
           FP + +++ PV+R ++   GR+R+F QCD D VGS +   +AE  ++  + L  +G+K  
Sbjct: 121 FPFKRFQVQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEAEFVLIYDEALSNLGLK-- 178

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
           D+ I INNRKIL GI E I     DK ++ + +  AIDKLDK GL GV   L E      
Sbjct: 179 DFTIKINNRKILSGIAEVI-----DKPDQIIDLTVAIDKLDKIGLDGVIKELNEK----- 228

Query: 224 GDFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
                    T   I  +     L    E+ +  L + ++ +  G KG +E+  I   ++ 
Sbjct: 229 -------GFTDTDISKLKPVILLEGSNEEKLASLRQALQNSAIGLKGCDEIESIFNYLKS 281

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
                  +++  T+ RGL YYTG ++E          K   V  GS+GGGGRYD L   F
Sbjct: 282 FNLQKATVELDITLARGLNYYTGAIFEV---------KTNEVAMGSIGGGGRYDDLTGMF 332

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
             + +   G S G  R+   L+ L+   +   +   VLI   D+D ++      + Q LR
Sbjct: 333 GLKGLTGAGISFGADRIYDVLEELKLFPDAAGQTTQVLICCFDNDGET--YALPFLQELR 390

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +  IR+E++  +      QL YA+ +  P  I+ G+ E   G+L  K++  G +     +
Sbjct: 391 SREIRSELYP-AGSKMKKQLDYANAKQIPYVIVIGSDEMESGLLSFKNMLTGDQEKLSTE 449


>gi|56476109|ref|YP_157698.1| histidyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81677555|sp|Q5P7B4|SYH_AZOSE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|56312152|emb|CAI06797.1| histidyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 438

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 112/507 (22%), Positives = 188/507 (37%), Gaps = 86/507 (16%)

Query: 1   MGKKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M +K  +    +  RG  D    E        D +R+   +YG+ PI  P++E +    +
Sbjct: 1   MTEKKPMIQALQAVRGMNDILPDEAEAWEHFEDIVRDWLRSYGYRPIRMPIVEPTPLFKR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S +D  +G+ ++LR + TA   R   ++        R Y  GP+FR
Sbjct: 61  AIGEVTDIVEKEMYSFEDALNGEQLTLRPEGTASCVRAAIQHKMLSAGAQRLYYHGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIG 168
           +E+   GR+RQF Q  V+ +G      DAE  +M A   +  G                 
Sbjct: 121 HERPQKGRYRQFHQIGVEALGFDGPDIDAEHILMCARLWDDFGLEDVRLELNSLGSSDER 180

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             +R  L   LE+     DD            D   +     +++L  +       D   
Sbjct: 181 ARHRAELVAYLERHRERLDD------------DGRRRLHTNPLRILDTK--NPELQDLV- 225

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
                 +    ++ FL  D  K  + +  L+K                            
Sbjct: 226 ------DNAPKLLDFLGEDSLKHFNGVQVLLKDA-----------------------GVP 256

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
            +I+  +VRGL+YY   V+E +          +    G+V  GGRYDGLV +  G+  PA
Sbjct: 257 YRINHRLVRGLDYYNRTVFEWVTT--------RLGAQGTVCAGGRYDGLVEQLGGRPAPA 308

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            GF++GI RL+   +          E     +  +     +        + LR+ G    
Sbjct: 309 AGFAMGIERLLALWRESGG----EAEPAQPDVYVVHLGEQAQRLAFRAAEALRSHGFAVL 364

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M  G   +F +Q+K AD    P+A++ G  E + G + +K L                  
Sbjct: 365 MHCGGG-SFKSQMKKADASGAPVAVVIGDDEAATGEVGLKPLR----------------- 406

Query: 469 ARVAQITIPISELVSTVKKILQENKEE 495
               Q  + +  L + V + L    EE
Sbjct: 407 GPGGQQRVALDGLANAVAECLFTENEE 433


>gi|255526675|ref|ZP_05393580.1| histidyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187180|ref|ZP_06855577.1| histidyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509655|gb|EET85990.1| histidyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048215|gb|EFG87652.1| histidyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 415

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 96/462 (20%), Positives = 181/462 (39%), Gaps = 56/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D   K+    + + +  R + E YG   I TP+ E+++   + + +  D 
Sbjct: 1   MNIQAPKGTKDMLPKDAYKWHYVENKFRELSEQYGIKEIRTPMFEHTELFTRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + TAP  R   E+       P + Y   P FR E    GR
Sbjct: 61  VQKEMYTFEDKGGRSITLKPEGTAPSVRAFIESSLYNEAQPTKLYYFIPAFRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
            RQF Q  V+  GS   + DAE   +    L+ +G+K        +          + + 
Sbjct: 121 LRQFHQYGVEIFGSQEASIDAEGISIAMRALDELGLKNLSLNINSLGCPDCRKKFNDALK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               +  ++            +F    +++L  +                ++    ++ +
Sbjct: 181 SFLKENYDDLCPTC-----KSRFERNPMRILDCKEEKCKK---------IAKNAPTILDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D +    EL + +                            +  I   IVRGL+YYT
Sbjct: 227 ICDDCKNHFEELKKYLDAI-----------------------GIKYTIDPYIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E I                +V GGGRYD L+    G ++PA GF+ G+ RLI+ L+
Sbjct: 264 KTVFEIIYKDL------------TVCGGGRYDKLIEELGGPDMPAFGFAAGLERLIMTLE 311

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           S       I     V +       D+  +       LR  G++ +     +++    +KY
Sbjct: 312 SEGI---EIPRSDYVDLYVGAMGDDAKIEAFKIVNALRAKGLKCDSDH-MNRSVKASMKY 367

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++      ++ G  E   G  ++K +  G++   ++K+ +S
Sbjct: 368 ANKTGARFTVVLGENELQAGTAKLKRMEDGQQFEVDLKDLDS 409


>gi|288574556|ref|ZP_06392913.1| histidyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570297|gb|EFC91854.1| histidyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 430

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 98/471 (20%), Positives = 186/471 (39%), Gaps = 52/471 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D    +       L+  R I + + +  +  P+ E+++   + + D  D   
Sbjct: 5   IKAPRGVRDILPDDSWKWGHTLNMSRKIADLFSYKEVHLPIFEHTELFARGIGDTTDVVE 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D  G+ I+LR +LTA + R   E+  +    P + +  GP+FR E+   GR+R
Sbjct: 65  KEMYTFEDKGGRSITLRPELTASMVRCYLEHSMNGGAQPVKLWGSGPMFRYERPQKGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLH 185
           QF Q D + +GS +   D E+ M   +    +G+   +  I      +      + +  +
Sbjct: 125 QFWQLDFEALGSDSPLVDLEVIMTAIELFRNLGMSNLEVVINSVGCPECRPAYRKALMDY 184

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               L+E           ++F    +++L  + + D   + T GA         +   L 
Sbjct: 185 LRPYLDELCGTC-----QNRFDRNPLRIL--DCKNDRCKEITDGA-------PAIFETLC 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +  +    +   +            L                       VRGL+YYT  
Sbjct: 231 DECSEHFKAVTSGLDSLGIVYHIDKRL-----------------------VRGLDYYTKT 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E         +        +V GGGRYD L     G +VP  GF+ G+ R+++ ++  
Sbjct: 268 AFEV--------QSGDLGAQNAVCGGGRYDNLSEAIGGPHVPGVGFAAGLDRIVLTMEQQ 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                +        +  +  D  + S        LR  GI A+M     ++   Q+K A 
Sbjct: 320 G---CDFGREPTPDVFVVCADEIARSLAVDVLYRLRREGISADMDY-LGRSMKAQMKSAV 375

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                +A I G  E  +G++ +KDL++ ++   E+++  S     + Q T+
Sbjct: 376 NGGSSVACIVGGDELDKGVVTVKDLSRSEQSQVELESLTSSVSRLLDQSTL 426


>gi|182685058|ref|YP_001836805.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|229558735|sp|B2IN41|SYH_STRPS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|182630392|gb|ACB91340.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 429

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 103/461 (22%), Positives = 178/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPPESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D             E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDKE---------AVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLVS F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVSYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVTL-PIENALDVYIAVLGEGANI--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFVAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|323499821|ref|ZP_08104780.1| histidyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315062|gb|EGA68114.1| histidyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 422

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 107/475 (22%), Positives = 188/475 (39%), Gaps = 73/475 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG  DC   +  +  ++ ++++N+   YG++ +  P++E +    + +
Sbjct: 1   MAK----KIQAIRGMNDCLPTQSPLWQKLENTVKNVISAYGYNEVRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSCIENSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGIDGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSLDDRAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     DD            D   +     +++L  +             
Sbjct: 177 YRTALIAFLEQHIDILDD------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+            L                  
Sbjct: 216 QAILGDAPRLSDYLGEESKEHFAGLCELLDAAGIEYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE +         V +  +     ++       ++LR    G+R  
Sbjct: 305 FAMGLERLVLMLETLELTDVRRS----VDVYMVTAGEGTMLAGMKLAELLREQVPGLRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           M      +F  Q K AD+    +A++ G  E +   + +KDL  G + +    + 
Sbjct: 360 MNHFGGGSFKKQFKRADKVGAAVALVLGENEVADNSVVLKDLIGGTQETYSQADV 414


>gi|294637688|ref|ZP_06715966.1| histidine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291089164|gb|EFE21725.1| histidine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 424

 Score =  257 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 101/470 (21%), Positives = 175/470 (37%), Gaps = 72/470 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  +   I  +++ +  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTALWQPIEAALKQVLASYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G +    DAE+ MM A   + +G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLAGPDIDAEIIMMTARWWKVLGIAEHVALELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAYLEQYKDQLDE------------DCKRRMYSNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  +       L  L+            L                  
Sbjct: 216 QALLNDAPRLSDYLDEESRIHFAGLCRLLDDAGIAYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV++  G   PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGAQGTVCAGGRYDGLVAQLGGHATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++     +      V +  +     + S      + LR A   +R  
Sbjct: 305 FAMGLERLVLLVQAVN---PDFLPQRTVDVYLIAVGEGTQSAAMRLAEQLRDALPQMRLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
              G   NF  Q   AD+    +A++ G  E   G + +K LA G++ S 
Sbjct: 362 TNYGGG-NFKKQFARADKWGARIALVLGESEVQSGQVNVKCLASGEQQSV 410


>gi|325698123|gb|EGD40004.1| histidine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 426

 Score =  257 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 170/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKPSL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSTYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+    V +  +   ++         Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV-ELPIETALDVYVAVLGAGANGR--ALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADNFKAKTLITLGESEVESGQVTVKNNYNREEITVSLDQIQE 415


>gi|125719062|ref|YP_001036195.1| histidyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166228621|sp|A3CR40|SYH_STRSV RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|125498979|gb|ABN45645.1| Histidyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 426

 Score =  257 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 94/463 (20%), Positives = 170/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSAYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    +     + +      +D+  +     Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV---ELPIETALDVYVAVLGADANGRALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADNFKAKTLITLGESEVESGRVTVKNNHNREEITVSLDQIQE 415


>gi|170289504|ref|YP_001739742.1| histidyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|229558740|sp|B1L829|SYH_THESQ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|170177007|gb|ACB10059.1| histidyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 420

 Score =  257 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 115/472 (24%), Positives = 191/472 (40%), Gaps = 60/472 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++    +G  D   +EI     + ++ RN+ E+ G + I TP+ E ++   + + +E D 
Sbjct: 1   MKYRRIKGTNDIFGEEIWYWRYVEETFRNVCESAGIEEIRTPIFEQTELFVRSVGEESDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ QD  G+ I+LR + TAP+ R   EN      F  R Y IGP+FR EK   GR
Sbjct: 61  VQKEMYTFQDKAGRSITLRPEGTAPVVRAFLENSLIDRGFQQRYYYIGPMFRYEKPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH----IGINNRKILDGILE 180
            RQF Q   + +G  +  AD E+ M++   L  +G+ +   H         RK     L+
Sbjct: 121 LRQFHQVGFEIIGPESPKADFEVIMLVDTFLRRLGLTKYKIHLNSIGCPVCRKNYREALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D L          D   ++    ++LL  +   + S +               
Sbjct: 181 EYYGQVLDNL--------CDDCKRRYETNILRLLDCKVDHEYSLN-----------APKS 221

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           V +L         +L E +                                  T+VRGL+
Sbjct: 222 VDYLCDSCRAHYKKLKEYL-----------------------NTFEIEYVEDHTLVRGLD 258

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E           +      ++ GGGRYDGL +   G +VPA GF+ GI R+I+
Sbjct: 259 YYTRTVFEV--------RHEGLGAQSAIAGGGRYDGLFAELGGSSVPALGFAGGIERIIL 310

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+       I      L+        +          LR  G+  ++ +   +    Q
Sbjct: 311 ALKAEGI---EIPMKNVHLVYIATLGEKAFMDGVRLAGELRKKGLSVDVDI-MDRKLSGQ 366

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           LK+A R     A+I G  E  +G++ ++DL  G ++  +      +   RV+
Sbjct: 367 LKHASRMGSRYAVIIGDEELEKGIVILRDLETGDQVEIDRDFAADYIAERVS 418


>gi|304398584|ref|ZP_07380456.1| histidyl-tRNA synthetase [Pantoea sp. aB]
 gi|304353795|gb|EFM18170.1| histidyl-tRNA synthetase [Pantoea sp. aB]
          Length = 424

 Score =  257 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 101/480 (21%), Positives = 178/480 (37%), Gaps = 72/480 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  +  RI   ++    +YG+  I  PL+E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTALWQRIEGVLKQTLASYGYSEIRLPLVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ M+ A   +A+G                   +
Sbjct: 117 PQKGRYRQFYQIGVEVFGLQGPDIDAELIMLNARWWKALGISEHVRLELNSIGSLEARAH 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRDALVAFLEQHKEVLDE------------DCKRRMYSNPMRVLDSKN---------SDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  +  +    L  L+                               
Sbjct: 216 QQLLNDAPQLGDYLDDESREHFSGLCALLDDA-----------------------GISYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V E +               G+V GGGRYDGLV +  G+  PA G
Sbjct: 253 VNQRLVRGLDYYNRTVIEWVT--------DSLGSQGTVCGGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       +    V +  +       S      + LR     +R  
Sbjct: 305 FAMGMERLVLLVQAVN---PEFEPTSNVDVYVIASGQGVQSAAMQLAEKLRDEAPELRLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q   AD+    +A++ G  E   G + IKDL +G++ + +     +   
Sbjct: 362 TNFGGG-NFKKQFARADKWGARVALVLGEDEVKAGQVVIKDLRRGEQQTLDQAEAAAVLR 420


>gi|300704413|ref|YP_003746016.1| histidyl-tRNA synthetase (histidine--tRNA ligase) [Ralstonia
           solanacearum CFBP2957]
 gi|299072077|emb|CBJ43409.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) [Ralstonia
           solanacearum CFBP2957]
          Length = 432

 Score =  257 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 106/500 (21%), Positives = 191/500 (38%), Gaps = 83/500 (16%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    +  +     +++R++   YG+  I TP++E++    + + +  D  
Sbjct: 3   KIAGVKGMNDLLPGDAPLWEHFDNAVRSMLRAYGYQQIRTPIVEHTQLFVRGIGEVTDIV 62

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G+ ++LR + TA   R V E+      P R +  GP+FR+E+   GR+
Sbjct: 63  EKEMYSFTDSLNGEHLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHERPQRGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDG 177
           RQF Q  V+ +G +    DAE+ +M     + +G                   +R  L  
Sbjct: 123 RQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAAHRADLIK 182

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE      D+            D   +     +++L  +                    
Sbjct: 183 YLEGFQDILDE------------DGKRRLYTNPLRVLDTKNPALQEMAAG---------A 221

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ +L     K    +  L+K                         +    I+  +VR
Sbjct: 222 PKLIDYLGEASLKHFEGVQALLKAN-----------------------NIPYTINPRLVR 258

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E            K    G+V GGGRYD L+ +  G+  PA G+++G+ R
Sbjct: 259 GLDYYNLTVFEWTT--------DKLGAQGTVAGGGRYDPLIEQIGGKPAPACGWAMGVER 310

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSS 414
           +I  L+    +           +  +     +  +  +  + LR AG+   +     GS+
Sbjct: 311 IIELLREERLAPEPQ----GCDVYIVHQGDQAQVQALVAAERLRDAGLDVILHCSPEGSN 366

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +F +Q K AD      A+I G  E + G+ QIK L  G+                  Q 
Sbjct: 367 GSFKSQFKRADASGASYAVIIGDDEVAAGVAQIKPLR-GE-------------PNADTQQ 412

Query: 475 TIPISELVSTVKKILQENKE 494
           T+P  +LV  +   +  N +
Sbjct: 413 TVPSDQLVDRLIDAMVANSD 432


>gi|189466841|ref|ZP_03015626.1| hypothetical protein BACINT_03217 [Bacteroides intestinalis DSM
           17393]
 gi|189435105|gb|EDV04090.1| hypothetical protein BACINT_03217 [Bacteroides intestinalis DSM
           17393]
          Length = 454

 Score =  257 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 152/505 (30%), Positives = 227/505 (44%), Gaps = 79/505 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPAMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I+F
Sbjct: 62  -KLLFKIQNSGDYFSGLTDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEIIF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     L+   E+ +  L E++ G+  G+KG  E   I + +   
Sbjct: 227 ------GISDEAIAKLQPIILLNGTNEEKLATLKEVLAGSEIGQKGVEESEFILKTLSVF 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNELELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  L+           +L         + S        +R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLDLYPKEAVNSTQLLFINFGEKEAAYS--LNILAKVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            GIRAE+F  SSK    Q+ YA+ +N P   + G  E +   + +K++  G++       
Sbjct: 389 EGIRAEIFPDSSK-MKKQMSYANAKNIPFVALVGENEMNENKVTLKNMETGEQS------ 441

Query: 463 NESWREARVAQITIPISELVSTVKK 487
                        +   EL+ T+KK
Sbjct: 442 ------------LVSAEELIQTLKK 454


>gi|156045617|ref|XP_001589364.1| hypothetical protein SS1G_09999 [Sclerotinia sclerotiorum 1980]
 gi|154694392|gb|EDN94130.1| hypothetical protein SS1G_09999 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 578

 Score =  257 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 129/532 (24%), Positives = 206/532 (38%), Gaps = 69/532 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K +K   + P+G  D   K++ IR++I  +I   ++ +G   I+TP+ E  D L    
Sbjct: 1   MAKGSKFELKTPKGTKDWQGKDMVIRDKIFSTITEAFKRHGAVTIDTPVFELKDILAGKY 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K ++ L D  G+  SLRYDLT P AR++A N                      
Sbjct: 61  GED---SKLIYDLADQGGEICSLRYDLTVPFARWLAMNGSVQSIKRYHIAKVYRRDQPAM 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+F QCD D  G           + +A  +      +  Y I +N+RKILDGI E
Sbjct: 118 TKGRMREFYQCDFDIAGVYDPMLPDAEVIRVATEVFEGLGWKGRYTIKLNHRKILDGIFE 177

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  D    +   +  A+DKLDK   + V+  + E              L  +  D +
Sbjct: 178 VCGVPED----KIRTISSAVDKLDKLPWEDVRKEMTEE-----------KGLAEDVADKI 222

Query: 241 VSFLSIDLEKSMH---ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++    +K +    +  E +    + + G  ++ ++   +       N +    ++ R
Sbjct: 223 GEYVVQKGQKDLLSKLQADEKLMANASMKAGLEDMDLLFGYLDAFKCLEN-VSFDLSLAR 281

Query: 298 GLEYYTGCVYEAIL---------------------------GFPVMNEKQKPVVFGSVGG 330
           GL+YYTG +YE +                                       V  GSV  
Sbjct: 282 GLDYYTGIIYEVVTEGSAPLVSTSAAPAAPPKSSKKPKKVADADEDRSSDPSVGVGSVAA 341

Query: 331 GGRYDGLVSRF--KGQNVPATGFSIGISRLIVALKSL--ESSTNNIKEMGPVLITTMDHD 386
           GGRYD LV  F  KG+ +P  G S G+ R+    K+   E  T        V    M   
Sbjct: 342 GGRYDNLVGMFAGKGKQIPCVGISFGVDRIFSITKARMEEEQTTEQVRNNDVDCFVMAFG 401

Query: 387 SD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                  L +       L  AGI+AE          NQ K A+    P ++I G  E ++
Sbjct: 402 GKGFTGLLKERMSICSTLWEAGIKAEFLYKVKPKLPNQFKAAEVNGVPFSVILGEDEITQ 461

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           G ++IK            +N           + + +  LVS VK+ L+   +
Sbjct: 462 GKVKIK------------ENGLRDGHPEKDGVMVNLDALVSEVKQRLKRKAD 501


>gi|325689257|gb|EGD31263.1| histidine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 426

 Score =  257 bits (655), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 170/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D          +  E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDK---------VAVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSAYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+    V +  +   ++         Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV-ELPIETALDVYVAVLGAGANDR--ALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADSFKAKTLITLGESEVESGQVTVKNNYNREEITVSLDQIQE 415


>gi|168494122|ref|ZP_02718265.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183575890|gb|EDT96418.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 429

 Score =  257 bits (655), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 103/461 (22%), Positives = 178/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D             E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDKE---------AVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLVS F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVSYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVTL-PIENALDVYIAVLGEGANI--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFVAKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|332358852|gb|EGJ36674.1| histidine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 426

 Score =  257 bits (655), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 96/463 (20%), Positives = 171/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKPSL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSAYFAAVRSMLE-----------------------ILQIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+    V +  +   ++         Q LRT G  AE      +    Q K
Sbjct: 317 DKQGV-ELPIETALDVYVAVLGPGANGR--ALELVQALRTQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADSFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQIQE 415


>gi|330920537|ref|XP_003299049.1| hypothetical protein PTT_09960 [Pyrenophora teres f. teres 0-1]
 gi|311327464|gb|EFQ92882.1| hypothetical protein PTT_09960 [Pyrenophora teres f. teres 0-1]
          Length = 520

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 134/498 (26%), Positives = 219/498 (43%), Gaps = 41/498 (8%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           MGK+ K      ++P+G  D   ++  +R+R+  ++  +++ +G   ++TP+ E  + L 
Sbjct: 55  MGKEDKSKSFNLKVPKGTRDWTGEDAALRDRLFQTVTEVFKRHGATTLDTPVFELKEILS 114

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
               ++   +K ++ LQD  G+  SLRYDLT PLAR++A N     F             
Sbjct: 115 GKYGED---SKLIYDLQDQGGELCSLRYDLTVPLARWLAMNPSVQSFKRYQIAKVYRRDQ 171

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
                GR R+F QCD D  GS          + +A  +       + Y I IN+RKILDG
Sbjct: 172 PAMTKGRMREFYQCDFDIAGSYDAMIPDAEVLKIATDVFDALDW-DSYTIKINHRKILDG 230

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           + +  G+  +        +  A+DKLDK     VK  +                L +E  
Sbjct: 231 LFKAAGVKEE----LIRPISSAVDKLDKLPWPEVKKEME------------TKGLPTEVA 274

Query: 238 DIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           D +  ++       + E     EL+  +    +G  E+ ++   +   G    RI    +
Sbjct: 275 DKIGEWVQRKGGDDIIEFLKTDELLSKSEDVSQGVREMELLFAYLDAFGSRK-RISFDLS 333

Query: 295 IVRGLEYYTGCVYEAIL--GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
           + RGL+YYTG +YE +     P +  +Q+ +  GSV  GGRYD LV  F G+ +P  G S
Sbjct: 334 LARGLDYYTGLIYEVVTEGSAPRVQGQQQEIGVGSVAAGGRYDQLVGMFSGKPIPCVGIS 393

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFL 411
            GI R+I  +K+   ST   K++   ++       +  L++     Q L  AGI+AE   
Sbjct: 394 FGIDRIISIMKARGQSTQRAKDVDAFVMAFGGKGFTGMLTERMQVAQELWAAGIKAEFSY 453

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
                   Q K A+    PLA+I G  E   G ++IK L    E            +   
Sbjct: 454 KLKPKVQQQFKQAEVAGVPLAVILGEDELKEGKIKIKVLGIKDE-----------NDPEK 502

Query: 472 AQITIPISELVSTVKKIL 489
             + +  S +V+ ++K L
Sbjct: 503 DGVLVDRSNMVTEIQKRL 520


>gi|281422088|ref|ZP_06253087.1| histidine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403877|gb|EFB34557.1| histidine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 454

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 138/478 (28%), Positives = 218/478 (45%), Gaps = 55/478 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D    E+  RN I ++I+ +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGPVEMAKRNYIFNTIKEVYALYGFQQIETPAMETLQTLMGKYGEEGDKL 63

Query: 65  ---RPNKGVF--SLQDDDGQWI------------SLRYDLTAPLARYVAENFDTIVFPCR 107
                N G +   + D+D   +             LRYDLT P ARYV ++ + +  P +
Sbjct: 64  LFKILNSGDYMNKVSDEDIHSLGSLKLAAKLCEKGLRYDLTVPFARYVVQHREELQMPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       G+      I
Sbjct: 124 RYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTKFGV---RVCI 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL GI E IG          + +  AIDKLDK GL  V   L            
Sbjct: 181 KINNRKILTGIAEVIGEAEK-----IVDITVAIDKLDKIGLDNVNEELRND--------- 226

Query: 228 KGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++ E I+ +   +S+    ++ +  + ++++G+  G KG  E   I + ++  G N
Sbjct: 227 ---GISEEAIEKLQPIISLSGTNDEKLEVIAKVLEGSEVGLKGVEETKFILDTLKTLGLN 283

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
            N I++  T+ RGL YYTG ++E          K      GS+ GGGRYD L   F    
Sbjct: 284 -NEIELDLTLARGLNYYTGAIFEV---------KALDTPMGSITGGGRYDNLTGIFGLPG 333

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G  R+   L +L+           VL           +         R AGI
Sbjct: 334 LSGVGISFGADRIYDVLGALDLYPKEAVNATQVLFINFGEKET--AYCLPIVSAARAAGI 391

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           R E+F   +K    Q+ YA+ +N P  ++ G  E ++G + +K++  G++     +  
Sbjct: 392 RTEIFPDKAK-MKKQMSYANAKNIPFVVLAGENEMAQGKVTLKNMETGEQTLVTAEEL 448


>gi|167587051|ref|ZP_02379439.1| histidyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 446

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 107/503 (21%), Positives = 205/503 (40%), Gaps = 68/503 (13%)

Query: 1   MGKKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M ++ +   +L   +G  D   ++  +      +++++   YG+  I TP++E++    +
Sbjct: 1   MTEQKRKIEKLAGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR
Sbjct: 61  GIGEVTDIVEKEMYSFTDALNGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         
Sbjct: 121 HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSL------ 174

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ E+   H  + +      + A+D   +  L    L + + +     +  + A      
Sbjct: 175 GLAEERAAHRVELIKYLEQHVDALDADAQRRLYTNPLRVLDTKNPALQEIVQNA------ 228

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL          L  L+K                         +    I+  +V
Sbjct: 229 -PKLIDFLGDHSRAHFDGLQRLLKAN-----------------------NIPFTINPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++G+ 
Sbjct: 265 RGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK- 415
           R++  LK  +       E   V +  +     +  +  +  + LR  G+       +   
Sbjct: 317 RILELLKEEQLMP----EQDGVDVYVVHQGEAAREQAFIAAERLRDTGLDVIFHCSADGA 372

Query: 416 --NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVA 472
             +F +Q+K AD      A+I G  E + G + +K L   G+E  +             A
Sbjct: 373 PASFKSQMKRADASGAAFAVIFGEEEIANGTVGVKALRGTGEEGEKN------------A 420

Query: 473 QITIPISELVSTVKKILQENKEE 495
           Q T+P+  L   +   +  + E+
Sbjct: 421 QQTVPVESLTEFLINAMVASAED 443


>gi|326335233|ref|ZP_08201428.1| histidine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692504|gb|EGD34448.1| histidine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 455

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 140/486 (28%), Positives = 224/486 (46%), Gaps = 58/486 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I+  IR  +E +GF PIETP  E  ++L GK+  + DR 
Sbjct: 3   KPSIPKGTRDFSPEEVSKRNYIIQIIRKNFEKFGFQPIETPSFENMETLMGKYGEEGDRL 62

Query: 67  NKGVFSLQDDDG--QWI--------------------SLRYDLTAPLARYVAENFDTIVF 104
              +F + +     + I                    +LRYDLT P ARYV ++   I F
Sbjct: 63  ---IFKILNSGDFLRDIPEDIYREHNSQKMTTQISEKALRYDLTVPFARYVVQHQSEITF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VG+++   + E   +      A+ +K   
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGANSLWQEVEFVQLYDSVFAALQLKG-- 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I IN+RKIL G  E IG          +    A+DKLDK G + V+  +         
Sbjct: 178 ITIKINHRKILSGFAEVIGTPEK-----LIDFTVALDKLDKIGKEKVEEEML-------- 224

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     L     + + +L EL+  +  G +G  +L  I E V++ 
Sbjct: 225 ----QRGISPEAIAKIQPVFSLQGSFSEKISQLKELLATSQVGREGIADLEFIYETVQQI 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   + +++  T+ RGL YYTG ++E            K VV GS+GGGGRYD L + F 
Sbjct: 281 GLQVSNLELEVTLARGLNYYTGAIFEV--------APPKEVVLGSIGGGGRYDELTAIFG 332

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            + +   G S G+ R+ + ++ L      +     VL          +S      Q LR 
Sbjct: 333 LKGMSGIGISFGLDRIFLVMEQLALFPETLTHSLDVLCVNFGKSEALIS--FGLVQQLRQ 390

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            G +AE++    K    QL YAD R     I+ G  E S+    +K++  G++++  I +
Sbjct: 391 KGYKAELYPEIIK-LKKQLAYADSRKAKYVILIGEEELSQNTAVLKNMLTGEQITYPIVD 449

Query: 463 NESWRE 468
             +  +
Sbjct: 450 IVNHIK 455


>gi|238763551|ref|ZP_04624512.1| Histidyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698183|gb|EEP90939.1| Histidyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 424

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 101/473 (21%), Positives = 186/473 (39%), Gaps = 64/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAIWQRIEGILKQVLAGYGYSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ ++ A    A+GI  +     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELILLTARWWRALGISEHVQLELNSIGSLDARAD 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D L+E        D   +     +++L  +              L  
Sbjct: 177 YREALVTFLEQHVDVLDE--------DCKRRMYSNPLRVLDSKN---------PDVQLLL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  + ++    L EL+                          S    ++  
Sbjct: 220 NDAPKLSDYLDDESKQHFAGLCELLD-----------------------QASIPYTVNER 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTNS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ ++++     + +    + +  +     + S      + LR     ++     G
Sbjct: 309 LERLVLLVQAVN---PDFQVPATIDVYLISSGEGAQSAAMQLAERLRDDLPTLKLMTNYG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  Q+  AD+    +A+I G  E +   + +KDL KG++ +    +  +
Sbjct: 366 GG-NFKKQITRADKWGARIALILGESEVAAQQVVVKDLRKGEQETLAQADVAA 417


>gi|319940132|ref|ZP_08014486.1| histidyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810846|gb|EFW07173.1| histidyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 426

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 94/471 (19%), Positives = 174/471 (36%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + +  R  ++ Y +  I TPL E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESVKWQYVEEFARKTFKKYHYAEIRTPLFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E   M A     +GI+     +             + 
Sbjct: 121 GRLREFHQIGVECFGSNNPATDVETIAMAAQFFNEIGIQGVTLQLNSLGNAESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L + L    + D   +     +++L  + + D          L  E    ++ 
Sbjct: 181 LIDYLTPLKDSL----SKDSQRRLEENPLRVLDSKEKEDK---------LAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESQTHFQAVRSMLEAL-----------------------GIPYIINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E                  ++  GGRYD LV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFT--------ADVAGNELTICAGGRYDSLVAYFGGPETAGFGFGMGVERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +           +    +        + +K     Q LR  G  AE     ++    Q K
Sbjct: 317 EKQGVVLPLEDSLD---VYIAVLGDGANNKALEIVQALRKQGFTAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD  +  + I  G  E     + IK+    +EL+  +   +   +    Q
Sbjct: 373 SADAFSAKVLITLGESEIESNQVTIKNNQTREELTVSLNQIQKDFQTIFEQ 423


>gi|332375783|gb|AEE63032.1| unknown [Dendroctonus ponderosae]
          Length = 518

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 116/493 (23%), Positives = 208/493 (42%), Gaps = 46/493 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   +  +G  D   +++ +R  +L+ I  +++ +G   I+TP+ E  + L     ++
Sbjct: 58  NQKFTLKTAKGTRDYSPEQMALRLSVLNKIVAVFKKHGAVTIDTPVFELKEVLTGKYGED 117

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  + +             N     G
Sbjct: 118 ---SKLIYDLKDQGGEILSLRYDLTVPFARYLAMNKISNIKRYHIA-KVYRRDNPSMSRG 173

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+         C+ +   +    +    Y + +N+R +LDG+ E  G
Sbjct: 174 RYREFYQCDFDIAGAFDPMIPDAECIKIVAEILD-SLNVASYVVKVNHRLLLDGMFEACG 232

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  D        +  A+DKLDK   Q VK  + E              L+    D +  +
Sbjct: 233 VPLDS----FRSICSAVDKLDKASWQDVKKEMVEE-----------KGLSEAAADQIGEY 277

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++  K + E     + +    +  +G   + ++        + S+++    ++ RGL+
Sbjct: 278 VKLNGGKELVEKLLSDDKLSKNKSALEGLEAIKLLLGYCEIF-HISDKVSFDLSLARGLD 336

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG +YEA+L       K + V  GSV GGGRYD L  +   K + VP  G S+G+ RL
Sbjct: 337 YYTGVIYEAVLLGDA--SKGEEVSVGSVAGGGRYDNLVGMFDVKNKQVPCVGVSLGVERL 394

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              L+    + N       V         + + +       L     + E     +    
Sbjct: 395 FAVLEQKIHAANRKVRTTEVDAYVCTAQKNLVEERLKLCNQLWEDDFKVEYSYKKNPKLL 454

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            QL+Y +  + P AII G  E   G+++++++   +E                    +  
Sbjct: 455 AQLQYCEENSIPFAIILGESEIKNGVVKLRNVLSREET------------------EVKR 496

Query: 479 SELVSTVKKILQE 491
           S L   +++ L E
Sbjct: 497 SALADELRRRLGE 509


>gi|283477573|emb|CAY73489.1| hisS [Erwinia pyrifoliae DSM 12163]
          Length = 441

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 100/470 (21%), Positives = 176/470 (37%), Gaps = 68/470 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    E  +  R+   ++ +  +YGF  I  P++E +    + + +  D  
Sbjct: 20  NIQAIRGMNDYLPAETAVWQRVEQILKQVLSSYGFSEIRMPIVEQTPLFKRAIGEVTDVV 79

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+   GR+R
Sbjct: 80  EKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYERPQKGRYR 139

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDG 177
           QF Q   +  G      DAE+ MM A   +A+G                   N R  L  
Sbjct: 140 QFHQIGAEVFGLQGPDIDAELIMMTARWWKALGIADHVRLELNSIGSLEARANYRHALVA 199

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE+     D+            D   +     +++L  +                    
Sbjct: 200 FLEQHVEVLDE------------DCKRRMYSNPLRMLDSKN---------PDIQALLNDA 238

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  +L  +  +    L   +       +    L                       VR
Sbjct: 239 PTLGDYLDDESREHFAGLCRQLDAAGIAYRVNQRL-----------------------VR 275

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ R
Sbjct: 276 GLDYYNRTVFEWVT--------DSLGAQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLER 327

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           L++ ++++       +    V +  +       S   +  + LR A   ++  M      
Sbjct: 328 LVLLVQAVN---PEFEPTRVVDVYVIASGQGVQSAALLLAEQLRDALPELK-LMSNFGGG 383

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           NF  Q   AD+    +A++ G  E + G L  KDL  G++ +   ++  +
Sbjct: 384 NFKKQFARADKWGARIALVLGEDEVANGQLVFKDLRNGEQQTLAQRDAAT 433


>gi|86145595|ref|ZP_01063925.1| histidyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85836566|gb|EAQ54692.1| histidyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 422

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 102/477 (21%), Positives = 185/477 (38%), Gaps = 73/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++  +++++   YG++ +  P++E ++   + +
Sbjct: 1   MAKN----IQAIRGMNDCLPTQSPLWQKVESAVKSVVSAYGYNEVRMPIVEETNLFSRAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEETDVVSKEMYTFDDRNGDSLTLRPEGTAGCVRSCIQNSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                  ++
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSQEDRVS 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALVAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+       +    L                  
Sbjct: 216 QAILGDAPRLSEYLGEESKQHFAGLCELLDAVGIEYQVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I               G+V GGGRYDGLV +  G+   A G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------DSLGAQGTVCGGGRYDGLVEQLGGKATNAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++LE +         V +  +     ++         LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLELTEVRRS----VDVYMVAAGEGTMIAGMQLANQLRDNVEGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           M      NF  Q K AD+    +A++ G  E +   + +KDL  G++ +        
Sbjct: 360 MNHFGGGNFKKQFKRADKVGAVVALVLGENEVADNTVVLKDLVGGEQQTVSQTEVAE 416


>gi|332827547|gb|EGK00293.1| histidyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 461

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 145/476 (30%), Positives = 214/476 (44%), Gaps = 53/476 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDED-- 64
           +  +P+G  D   +E+  RN I ++IR +++ YGF  IETP +E     LGK+  + D  
Sbjct: 10  QPSIPKGTRDFSPEEMAKRNYIFNTIREVFKLYGFRQIETPAMENLSTLLGKYGEEGDKL 69

Query: 65  ---RPNKGVFSLQDDDGQWIS---------------LRYDLTAPLARYVAENFDTIVFPC 106
                N G + L+D   + +S               LRYDLT P ARYV  + + I FP 
Sbjct: 70  LFKILNSGDY-LKDISDEELSERNVNRLATRLSEKGLRYDLTVPFARYVVMHRNEITFPF 128

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           R Y+I PV+R ++   GR+R+F QCD D +GS +   + E+  ++ +     GI      
Sbjct: 129 RRYQIQPVWRADRPQKGRYREFFQCDADIIGSDSLINEVELIQIIDEVFNRFGI---RVC 185

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I +NNRKIL GI E IG            +  AIDKLDK GLQ V   L           
Sbjct: 186 IKLNNRKILSGIAEIIGESDK-----ITDITVAIDKLDKIGLQKVNEELASKGIPQKAI- 239

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
                   EQ+  ++     + EK +  L  ++K +  G KG +EL  I   ++  G  S
Sbjct: 240 --------EQLQPIILLQGSNGEK-LDTLKTVLKDSDTGIKGVDELGFILNRLKIIGIRS 290

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             + +  T+ RGL YYTG + E          K   V  GS+ GGGRYD L   F    V
Sbjct: 291 -ELDLDLTLARGLNYYTGAIIEV---------KALDVQMGSITGGGRYDNLTGIFGLPGV 340

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
              GFS G  R+   L  L+    +  +   VL        ++          +R A I 
Sbjct: 341 SGVGFSFGADRIFDVLNQLDLYPKDSIQNTQVLFVNFGEKEET--YILPLITKMRQANIS 398

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            E++   SK    Q+ YAD    P   I G  E + G + +K++  G++    ++ 
Sbjct: 399 TEIYPEQSK-MKKQMSYADSNKIPYVAIIGENEMNEGKITLKNMVTGEQDLLSLEE 453


>gi|261345333|ref|ZP_05972977.1| histidine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282566374|gb|EFB71909.1| histidine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 420

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 186/467 (39%), Gaps = 63/467 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           MGK      +  RG  D    + R+  +I  +++NI + YGF  I TP++E +    + +
Sbjct: 1   MGKN----IQAIRGMNDYLPADTRVWQKIEATLKNILQGYGFSEIRTPIVEQTPLFRRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D + + ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFNDRNEESLTLRPENTAGCVRAGIEHGLLYNQEQRLWYLGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G +    DAE+ +M A    A+GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGAEVFGLAGPDIDAEVILMTARWWRALGISEHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +          K      
Sbjct: 177 YRDALVAFLEQHKDKLDE--------DCKRRMYSNPLRVLDSKN---------KDVQALL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  +  +    L +L+                            + +++  
Sbjct: 220 NDAPALFDYLDDESREHFDGLCKLLDNA-----------------------GIQYRVNQR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTTA--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R+++ ++ +        +     +       +S     +  + +R A   +R     G
Sbjct: 309 MERMVLLVQEVN--PEFTADNSVADVYLASFGDNSQQAALLVAEKVRDALPTLRLMTNHG 366

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
              NF  QL  AD++   LA+I G  E     + +KDL  G + +  
Sbjct: 367 GG-NFKKQLARADKQGAKLALILGEDEIQNSQVTLKDLRTGTQETIS 412


>gi|149277280|ref|ZP_01883422.1| histidyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149232157|gb|EDM37534.1| histidyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 461

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 142/488 (29%), Positives = 227/488 (46%), Gaps = 63/488 (12%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDE 63
           + ++  L +G  D   +E+  RN I D+I+ ++  +G+  I+TP +E   +L GK+  + 
Sbjct: 2   SNIKPSLVKGTRDFSPQEMVKRNYIFDAIKTVFLKFGYAEIQTPTMENLSTLTGKYGDEG 61

Query: 64  DRPNKGVFSLQDDDG-------QWI---------------SLRYDLTAPLARYVAENFDT 101
           D   K +F + +          + +               +LRYDLT P ARYV  + + 
Sbjct: 62  D---KLIFKILNSGDYLSKANPELLAAGNSNALTSSISEKALRYDLTVPFARYVVMHQND 118

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
           I  P + +++ PV+R ++   GR+R+F QCD D VGS +   +AE  ++  + L  +G+K
Sbjct: 119 ITLPFKRFQVQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEAEFILIYQEALSDLGLK 178

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
             D+ I +NNRKIL GI E IG          + +  AIDKLDK GL GV   L E    
Sbjct: 179 --DFTIKLNNRKILTGIAEIIGKPE-----LIIDMTVAIDKLDKIGLDGVSKELLER--- 228

Query: 222 NSGDFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                      T   ++ +     L    E  +  L +++  + AG KG  E+  +   +
Sbjct: 229 ---------GFTEGDLEKLTPVILLQGTNEAKLDSLRKVLGSSEAGMKGIAEIETVFGYL 279

Query: 280 RKSGYNS----NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
               +        +++  T+ RGL YYTGC++E          K      GS+GGGGRYD
Sbjct: 280 AALQHPDTMHQPNVELDITLARGLNYYTGCIFEV---------KTNEATMGSIGGGGRYD 330

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            L   F  + +   G S G  R+   L  L     +      VLI+  D  ++       
Sbjct: 331 DLTGMFGLKGLTGVGISFGADRIYDVLMELNLFPESAVAGTRVLISNFDDAAER--YALP 388

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             Q LR AGI AE++  ++K    Q+ YAD +N P  ++ G+ E   G+L +KD+  G++
Sbjct: 389 LLQQLRAAGIAAELYPAAAK-LKKQMSYADAKNIPYVVLIGSEEMQEGLLTLKDMRTGQQ 447

Query: 456 LSREIKNN 463
               I   
Sbjct: 448 EKLAIAEI 455


>gi|86607115|ref|YP_475878.1| histidyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|123724539|sp|Q2JRX6|SYH_SYNJA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|86555657|gb|ABD00615.1| histidyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 419

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 106/468 (22%), Positives = 186/468 (39%), Gaps = 59/468 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D   +E+R+  ++  S R I     +  I TP+LE ++   + +    D   
Sbjct: 4   IQAVRGTRDILPQEVRLWQQVEASAREILGRANYQEIRTPILELTELFARSIGSATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGRFR 126
           K ++S      Q +SLR + TA + R   ++   +     R +  GP+FR E+   GR R
Sbjct: 64  KEMYSFSTRGEQEVSLRPENTAGVVRAYIQHGLQVAGDVQRLWYCGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGILEKI 182
           QF Q  V+ +GS    ADAE+  +  D L AVG +     +       +R+     L   
Sbjct: 124 QFHQLGVELLGSRDPRADAEVIALAWDLLRAVGAENLTLRLNSLGDPQDRRAYRQALVDY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                ++L+         D  ++     +++L  +     +          +EQ   +  
Sbjct: 184 LTPLKEELDL--------DSQERLVRNPLRILDSKDPHTRT---------IAEQGPKLPD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +LS D      ++   ++                             ++   +VRGL+YY
Sbjct: 227 YLSADSRAFFEQVQAHLQAL-----------------------DIPYELDPYLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E +                +V GGGRYDGLV    G   PA G++IG+ RL++ L
Sbjct: 264 THTAFEIVSPE--------LGSQSTVCGGGRYDGLVEELGGPPTPAVGWAIGLERLVLLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +           V +  +   + + ++     Q LR AG   E+ L S   F  Q K
Sbjct: 316 QKKQQEIPP----TSVEVYVISRGAKAEAQSLQIAQALRQAGFCTELDL-SGSAFSKQFK 370

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            A R     A+  G  E + G +Q+K L  G++ +    +   +  ++
Sbjct: 371 RASRSGATWAVALGDAEAAAGEVQLKHLPTGQQQTLLQADLVKYLVSQ 418


>gi|303245826|ref|ZP_07332108.1| histidyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492609|gb|EFL52477.1| histidyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 421

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 110/497 (22%), Positives = 199/497 (40%), Gaps = 78/497 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K++     GFAD    +  +   I  + R ++  YG+  +  P+LE ++   + +
Sbjct: 1   MEKIQKIK-----GFADLFPPDSTVFAFIEKTARAVFSRYGYKELRVPVLERTELFARGI 55

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D  G+ ++LR + TA + R + E+        + +  GP+FR E+
Sbjct: 56  GEETDVVQKEMYTFPDRKGRSLTLRPEATAGVMRALVEDGRANEGLVKYFAYGPMFRYER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGI 178
              GR RQF Q DV+ VGS     DAE+ +M+   L A+G+      +     R+     
Sbjct: 116 PQKGRMRQFHQIDVEAVGSPEPLLDAEVLLMLDQYLRALGLADLTVELNSLGCRQCRPAY 175

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L+ +     + L          D + +     +++L  + +     +FT  A        
Sbjct: 176 LDVL----REFLKGMHKEQLCEDCMRRKLTNPLRVL--DCKVPQCKEFTADA-------P 222

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   L  +       +  ++                            R  ++  +VRG
Sbjct: 223 KITDHLCPECAAHFATVTGMLDAAGL-----------------------RYTLNPRLVRG 259

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY    +E +                SV GGGRYDGLVS   G +VP  GF+ G+ RL
Sbjct: 260 LDYYVRTTFEIV--------SGDIGSQSSVAGGGRYDGLVSAIGGPDVPGVGFACGMERL 311

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + +  +     +              D+  L +  +  Q LR AG   E    ++++  
Sbjct: 312 ALLIDKVNEPAPD--------FYLAVLDASGLDRGLLLAQDLRRAGFSGE-APYAARSVK 362

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           +Q++ AD+      ++ GT E + G + +K++  G                   Q TI  
Sbjct: 363 SQMRAADKSGARFCLVLGTDELAAGTVVVKNMTAG------------------GQETINR 404

Query: 479 SELVSTVKKILQENKEE 495
             LV+ ++  L+E K+E
Sbjct: 405 DMLVAHLRARLEEAKDE 421


>gi|296192945|ref|XP_002744292.1| PREDICTED: probable histidyl-tRNA synthetase, mitochondrial isoform
           2 [Callithrix jacchus]
          Length = 481

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 124/486 (25%), Positives = 214/486 (44%), Gaps = 48/486 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D   +++ +R +ILD + + ++ +G   ++TP  E  + L +   ++   +  ++ L
Sbjct: 37  GTRDLSPQQMVVREKILDLVVSCFKRHGAKGMDTPAFELKEMLTEKYGED---SGLMYDL 93

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRFRQFIQC 131
           +D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E      GR+R+F QC
Sbjct: 94  KDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPTIVQGRYREFCQC 150

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
           D D  G        +   +        G++  D+ I +N+R+I+DG+    G+       
Sbjct: 151 DFDIAGQFD-PMIPDAECLKIMCEILNGLQLGDFLIKVNDRRIVDGMFAVCGVPES---- 205

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +   +  +IDKLDK   + V+            +      L  E  D +  ++     +S
Sbjct: 206 KFRTICSSIDKLDKMAWKDVR-----------HEMVAKKGLAPEVADRIGDYVRCHGGES 254

Query: 252 M---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +         +       +G  +L ++ E +   G    +I    ++ RGL+YYTG +YE
Sbjct: 255 LVKQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGIAK-KISFDLSLARGLDYYTGVIYE 313

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVALKSLE 366
           A+L        ++P+  GSV  GGRYDGLV  F      VP  G SIG+ R+   ++   
Sbjct: 314 AVLLHTPTQAGEEPLSVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERIFNIVEQRM 373

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +           +       + L +       L  AGI+AEM   ++     QL Y + 
Sbjct: 374 KTFGEKVRTTETQVLVATPHKNFLHERLKLIAELWDAGIKAEMLYKNNPKLLTQLHYCES 433

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              PL +I G  E   G+++I+ +A  +E++                  I    LV+ ++
Sbjct: 434 TGIPLVVIVGEQELKEGVVKIRSVASREEVA------------------IKRENLVAEIQ 475

Query: 487 KILQEN 492
           K L E+
Sbjct: 476 KRLSES 481


>gi|227513282|ref|ZP_03943331.1| histidyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083483|gb|EEI18795.1| histidyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 430

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 103/493 (20%), Positives = 187/493 (37%), Gaps = 67/493 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G AD   +E R    + ++ R ++ +Y +  I TP+ E  D   +   D  D 
Sbjct: 1   MRYQRPKGTADILPEEARKWTYVEETARMLFNDYRYQEIRTPMFENFDVFSRTSGDTSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR---TYRIGPVFRNEKHGP 122
             K ++  +D   + ISLR + TA + R   EN        R    + +G +FR E+   
Sbjct: 61  VTKEMYDFKDKGDRHISLRPEGTAGVVRAFVENKLYGPEHQRPVKVFYMGSMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS     D E+  M  D L   G+K     I             + 
Sbjct: 121 GRQREFHQIGVEAFGSDEPELDVEVIAMGMDLLHHFGLKDIRLEINSLGDAASRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   D   + L    + D   +     +++L  + + D             +    ++ 
Sbjct: 181 LIDYLDPHFDEL----SKDSQVRLHKNPLRVLDSKDKQDQE---------IVKDAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D +K    + +L+                               I   +VRGL+YY
Sbjct: 228 YLNDDSKKHFERVKKLLDTL-----------------------HIPYVIDPDMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E ++    + E        ++  GGRY+GLV +  G  +P  GF +G+ RL++ +
Sbjct: 265 THTIFEIMVDSKALGEGYT-----TICAGGRYNGLVEQLGGPEMPGIGFGLGMERLMLLM 319

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +          +  +    +     +  +     Q LR  G  A+     ++    Q K
Sbjct: 320 DAQGV---KFPVLDQLDAYVVGIGEQTSIETLKIVQALRANGFAADRDY-LNRKPKAQFK 375

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            AD+ N    I  G  E       +K +A GKE+                   +PI +++
Sbjct: 376 SADKLNAQYTITIGESELESHTANVKSMASGKEI------------------NVPIDKII 417

Query: 483 STVKKILQENKEE 495
           +   +I+  N  +
Sbjct: 418 NDFDEIITSNFND 430


>gi|168491651|ref|ZP_02715794.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183574087|gb|EDT94615.1| histidyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 429

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++  
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIF 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++  +K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGAN--AKALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + IK+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESGQVTIKNNQTREEVQVSLETI 413


>gi|104773942|ref|YP_618922.1| histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123251924|sp|Q1GAG8|SYH_LACDA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|103423023|emb|CAI97709.1| histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|325125611|gb|ADY84941.1| Histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 428

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 105/467 (22%), Positives = 186/467 (39%), Gaps = 57/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G  D   +      ++  + R++++   +  I TP  E  +   +   +  D 
Sbjct: 1   MRVQRPKGTVDILPETSGQWEKVEQTARDLFKRANYHEIRTPSFENYELFSRSSGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAEN---FDTIVFPCRTYRIGPVFRNEKHGP 122
             K ++  +D  G+ I+LR + TA + R   EN       V P   Y I  ++R E+   
Sbjct: 61  VEKEMYDFEDKGGRHIALRPEGTAGVVRAYVENKIYGPDYVKPFNVYYIAAMYRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS+   AD E  ++  D L  +G+K  + HI        R+     
Sbjct: 121 GRQREFHQIGVESFGSNGYLADVETILLGHDLLAELGVKNYELHINTLGDSEVRQAYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   + G   +++L  +   D              +  
Sbjct: 181 LVDYFTPVKDQLSE--------DSQRRLGKNPLRILDSKAEEDQQF---------LSEAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +L  + +++ +++   +          ++L                       VRG
Sbjct: 224 KIRDYLDEESKENFNKILASLDKLGVKYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++  P +          +V GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVDDPTLWA-----SPSTVLGGGRYNHLVEEFSGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L         + E   +     +    +  K     + LR+ G  A+  +   K   
Sbjct: 316 MLVLSKQN---PEMFEDQGIDFFITNIGEGTDIKAVEVARQLRSLGFSAQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            Q + ADR      +  G  E + G L +K L+ G++ S E  + E 
Sbjct: 372 AQFRKADRVGARYVVTLGAKELAEGKLTVKRLSDGQQFSLEFTDLED 418


>gi|110806445|ref|YP_689965.1| histidyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|110615993|gb|ABF04660.1| histidine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 414

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 101/462 (21%), Positives = 181/462 (39%), Gaps = 60/462 (12%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    E  I  RI  +++N+  +Y +  I  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDYLPGETAIWQRIEGTLKNVLGSYCYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  ++LR + TA   R   E+        R + IGP+FR+E+   GR+RQF Q   
Sbjct: 61  EDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGC 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGLHGDD 188
           +  G      DAE+ M+ A    A+GI  +     +    +  R      L        +
Sbjct: 121 EVFGLQGPDIDAELIMLTARWWRALGIFEHVTLELNSIGSLEARANYRDALVAFLEQHKE 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           KL+E        D   +     +++L  +     +                +  +L  + 
Sbjct: 181 KLDE--------DCKRRMYTNPLRVLDSKNPEVQA---------LLNDAPALGDYLDEES 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +    L +L++           L                       VRGL+YY   V+E
Sbjct: 224 REHFAGLCKLLESAGIAYTVNQRL-----------------------VRGLDYYNRTVFE 260

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            +               G+V  GGRYDGLV +  G+  PA GF++G+ RL++ ++++   
Sbjct: 261 WVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVN-- 310

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADR 426
               K    V I  +   +D+ S      + LR    G++     G   NF  Q   AD+
Sbjct: 311 -PEFKADPVVDIYLVASGADTQSAAMALAERLRDELLGVKLMTNHGGG-NFKKQFARADK 368

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
               +A++ G  E + G   +KDL  G++ +    +  +   
Sbjct: 369 WGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR 410


>gi|325958379|ref|YP_004289845.1| ATP phosphoribosyltransferase regulatory subunit [Methanobacterium
           sp. AL-21]
 gi|325329811|gb|ADZ08873.1| ATP phosphoribosyltransferase regulatory subunit [Methanobacterium
           sp. AL-21]
          Length = 429

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 113/462 (24%), Positives = 200/462 (43%), Gaps = 37/462 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + PRG  D   +E++ R  + ++++ I+E+YG+  I+TP+ E          +  + 
Sbjct: 1   MELQRPRGTRDFLFEEMKERKNVENTMKRIFESYGYGEIKTPIFEELSLFTTKSGEGIKD 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              ++  QD  G+ ++LR +LTAP+AR   +       P + Y  G  FR E+   GRFR
Sbjct: 61  --QIYHFQDKSGRDLALRPELTAPVARMYIKELQKAPKPVKMYYFGSCFRYERPQAGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   + +G  +  ++AE+  M A  L+ +G+   +Y I I N  IL  IL    + G
Sbjct: 119 QFWQLGCELIGGKSPGSEAEVISMAAHCLDELGL--ENYEIHIGNLGILRNILIDAQILG 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D +                     V   + +G  +   +  K  N   +  ++++  + +
Sbjct: 177 DTQ-------------------DQVMAAIDKGDAEELKNLLKSINTDEDSEELLLKLIDM 217

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             + S+ +  E +    +         +   L     +  +   ++  I RGL+YYTG V
Sbjct: 218 KGDASILKDAEALI-NCSENACNALFELEKLLEALEAFGFSNYTVNLGIARGLDYYTGTV 276

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E  +                + GGG Y  L+  F G+ V +TGF+ G  R    +++L+
Sbjct: 277 FEIYVHG--------LGAQKQISGGGTY-NLIELFGGEKVESTGFAFGFDR---VMEALK 324

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I +   V +     +SD         Q LR A I AE+ L   K     L YAD 
Sbjct: 325 KQQTTIDKEEAVKVFVAPLNSDLSLTGYEIVQKLRKANIGAEVDL-VGKKLKKILSYADT 383

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +     ++ G+ E   G + +KD+  G++ S  I   ES+ +
Sbjct: 384 KQISYVVLLGSREFEEGKVTVKDMNTGEQESVNISEVESYFK 425


>gi|332234662|ref|XP_003266525.1| PREDICTED: probable histidyl-tRNA synthetase, mitochondrial isoform
           2 [Nomascus leucogenys]
          Length = 481

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 124/486 (25%), Positives = 216/486 (44%), Gaps = 48/486 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D   + + +R +ILD + + ++ +G   ++TP  E  ++L +   ++   +  ++ L
Sbjct: 37  GTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGED---SGLMYDL 93

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRFRQFIQC 131
           +D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E      GR+R+F QC
Sbjct: 94  KDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPAIVQGRYREFCQC 150

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
           D D  G        +   +        G++  D+ I +N+R+I+DG+    G+       
Sbjct: 151 DFDIAGQFD-PMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAVCGVPES---- 205

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +   +  +IDKLDK   + V+            +      L  E  D +  ++      S
Sbjct: 206 KFRAICSSIDKLDKMAWKDVR-----------HEMVAKKGLAPEVADRIGDYVQCHGGVS 254

Query: 252 MHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           + E       +       +G  +L ++ E +   G  +++I    ++ RGL+YYTG +YE
Sbjct: 255 LVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARGLDYYTGVIYE 313

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVALKSLE 366
           A+L    +   + P+  GSV  GGRYDGLV  F      VP  G SIG+ R+   ++   
Sbjct: 314 AVLLQTPIQAGEDPLNVGSVAAGGRYDGLVGMFHPKGHKVPCVGLSIGVERIFYIVEQRM 373

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +           +       + L +       L  +GI+AEM   ++     QL Y + 
Sbjct: 374 KTKGEKVRTTETQVFVATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKLLTQLHYCES 433

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              PL +I G  E   G+++I+ +A  +E++                  I    LV+ ++
Sbjct: 434 TGIPLVVIIGEQELKEGVIKIRSVASREEVA------------------IKRENLVAEIQ 475

Query: 487 KILQEN 492
           K L E+
Sbjct: 476 KRLSES 481


>gi|194396786|ref|YP_002038709.1| histidyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|229558746|sp|B5E3C8|SYH_STRP4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|194356453|gb|ACF54901.1| histidyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 429

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 101/461 (21%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D    +M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVXTIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFATKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|67924802|ref|ZP_00518201.1| Histidyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501]
 gi|67853344|gb|EAM48704.1| Histidyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501]
          Length = 426

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 103/472 (21%), Positives = 182/472 (38%), Gaps = 60/472 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P G  D   +EI     +      I     +  I  P+ E +    + + +  D  
Sbjct: 3   TIQTPPGTKDILPEEIGYWQYVETVATQILSRAMYYEIRPPIFEQTSLFERGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRF 125
            K +++ +D   + ++LR + TA + R   +N         R +  GP+FR E+   GR 
Sbjct: 63  GKEMYTFRDRGDRSLTLRPEGTAGVVRAYLQNNLYAAGGVKRLWYFGPMFRYERPQAGRQ 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEK 181
           RQF Q  ++ +G+    AD E+  +  D L+ +G++     I      N+R+     L  
Sbjct: 123 RQFHQIGLELIGTGDPRADVEVIALATDILKTLGLQSLKLDINSVGDRNDRQNYREALVN 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             L   ++L+         D  D+     +++L  + +              +E    ++
Sbjct: 183 YFLPYKEELD--------PDSQDRLEKNPLRILDSKAKRTKE---------INENAPSIL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L    +K   ++ +L+                               I+  +VRGL+Y
Sbjct: 226 EYLGDASKKHFDQVQQLLTDL-----------------------GIEYNINPCLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E I                +V GGGRYDGLV    G   PA G++IG+ RLI+ 
Sbjct: 263 YTHTAFEII--------SDDLGAQATVCGGGRYDGLVEELGGNPTPAVGWAIGMERLIIL 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           LK L+ S     +     I  +     + ++  +  Q LR  G+  E+ + S   FG Q 
Sbjct: 315 LKKLQPSPQTSPD-----IYVVSRGEAAEAQGLLLAQKLRAEGLTVELDM-SGSAFGKQF 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K ADR      ++ G  E     +Q+K L   ++ +       +       Q
Sbjct: 369 KRADRSGAIACLVLGEEEAVNQTVQLKWLQSKEQQTMTQSELFNQVGELKEQ 420


>gi|319951616|ref|YP_004162883.1| histidyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319420276|gb|ADV47385.1| histidyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 458

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 144/484 (29%), Positives = 223/484 (46%), Gaps = 52/484 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D    E+  RN I D+I+  ++ +GF PIETP  E SD+L GK+  + D  
Sbjct: 4   KPSIPKGTRDFTPSEVVKRNYIFDTIKKNFQTFGFQPIETPSFENSDTLMGKYGDEGDRL 63

Query: 65  ---RPNKGVF-------SLQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCR 107
                N G +       + ++ +   I+       LRYDLT P ARYV  + + I FP +
Sbjct: 64  IFKILNSGDYLNKVDDATYREKNSNAITSKISEKALRYDLTVPFARYVVMHQNEIDFPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GRFR+F QCD D VGS +   + E   +       +  K +   I
Sbjct: 124 RYQIQPVWRADRPQKGRFREFYQCDADVVGSDSLLQEVEFVQLYDAVFADL--KLDGVTI 181

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +NNRKIL GI E IG          +    A+DKLDK G +GVK  + E          
Sbjct: 182 KMNNRKILAGIAEVIGAKD-----NLIDFTVALDKLDKIGEEGVKKEMLEK--------- 227

Query: 228 KGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++   I+       +     + +  L +L+  +  G KG  EL  I E + + G  
Sbjct: 228 ---GISETAIEKASPLFKLTGTNLEQLDALEKLLSSSEEGAKGVAELRFIIETISELGLQ 284

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +  + I  T+ RGL YYTG ++E      V          GS+GGGGRYD L   F  ++
Sbjct: 285 TATLAIDVTLARGLNYYTGAIFEVGAPEGVK--------MGSIGGGGRYDDLTGIFGLKD 336

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           V   G S G+ R+ + L+ LE     I +   VL                    LR  G+
Sbjct: 337 VSGVGISFGLDRIYLVLEELELFPEAIDQSLQVLCVNFGDQEAL--AALKLVTNLRKQGV 394

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +A+++  S+K    Q+KYA+ RN P  I+ G  E +     +K++ +G + +  +     
Sbjct: 395 KADVYPNSAK-MQKQMKYANNRNVPFVILIGDEELANNSFVVKNMKEGSQETYSLDKVAE 453

Query: 466 WREA 469
           + + 
Sbjct: 454 FVKN 457


>gi|237723396|ref|ZP_04553877.1| histidyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|299149448|ref|ZP_07042505.1| histidine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|229447918|gb|EEO53709.1| histidyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|298512635|gb|EFI36527.1| histidine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 454

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 153/505 (30%), Positives = 219/505 (43%), Gaps = 79/505 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++        I    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSRFNI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILSGIAEIIGESDK-----IVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++  +  G KG  E   I   +   
Sbjct: 227 ------GISDEAIAKLQPIILLSGTNAEKLATLKNVLSASEVGLKGVEESEFILNTLETM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S        +R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTELLFINFGEKEAAFS--MGILSKVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  ++K    Q+ YA+ +N P   I G  E + G   +K++  G++       
Sbjct: 389 AGIRAEIFPDAAK-MKKQMSYANTKNIPFVAIVGENEMNEGKAMLKNMETGEQN------ 441

Query: 463 NESWREARVAQITIPISELVSTVKK 487
                        +   EL++TVKK
Sbjct: 442 ------------LVSAEELIATVKK 454


>gi|160888713|ref|ZP_02069716.1| hypothetical protein BACUNI_01131 [Bacteroides uniformis ATCC 8492]
 gi|317479542|ref|ZP_07938671.1| histidyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156861612|gb|EDO55043.1| hypothetical protein BACUNI_01131 [Bacteroides uniformis ATCC 8492]
 gi|316904300|gb|EFV26125.1| histidyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 453

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 149/486 (30%), Positives = 217/486 (44%), Gaps = 61/486 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIREVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGLTDEELLSRNAPRLACKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRK+L GI E IG          + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKVLSGIAEIIGESDK-----IVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS   E+ +  L E++  +  G KG  E   I   ++  
Sbjct: 227 ------GISDEAIAKLQPIILLSGSNEEKLATLKEVLAVSETGLKGVEESEFILSTLKNL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  L+           +L         + S        +R 
Sbjct: 331 MSGVSGVGISFGADRIFDVLNQLDLYPKEAVNGTQLLFINFGEKEAAFS--MNVLTEVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  +SK    Q+ YA+ +  P   + G  E + G + +K++  G++     + 
Sbjct: 389 AGIRAEIFPDASK-MKKQMGYANSKAIPFVALVGENEMNEGKVTLKNMETGEQKMVTPQE 447

Query: 463 NESWRE 468
             S  +
Sbjct: 448 LVSELK 453


>gi|116513950|ref|YP_812856.1| histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275280|sp|Q04AV4|SYH_LACDB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116093265|gb|ABJ58418.1| histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 428

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 105/467 (22%), Positives = 186/467 (39%), Gaps = 57/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G  D   +      ++  + R++++   +  I TP  E  +   +   +  D 
Sbjct: 1   MRVQRPKGTVDILPETSGQWEKVEQTARDLFKRANYHEIRTPSFENYELFSRSSGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAEN---FDTIVFPCRTYRIGPVFRNEKHGP 122
             K ++  +D  G+ I+LR + TA + R   EN       V P   Y I  ++R E+   
Sbjct: 61  VEKEMYDFEDKGGRHIALRPEGTAGVVRAYVENKIYGPDYVKPFNVYYIAAMYRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS+   AD E  ++  D L  +G+K  + HI        R+     
Sbjct: 121 GRQREFHQIGVESFGSNGYLADVETILLGHDLLAELGVKNYELHINTLGDSEVRQAYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   + G   +++L  +   D              +  
Sbjct: 181 LVDYFTPVKDQLSE--------DSQRRLGKNPLRILDSKAEEDQQF---------LSEAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +L  + +++ +++   +          ++L                       VRG
Sbjct: 224 KIRDYLDEESKENFNKILASLDKLGVKYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++  P +          +V GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVDDPTLWA-----SPSTVLGGGRYNHLVEEFSGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L         + E   +     +    +  K     + LR+ G  A+  +   K   
Sbjct: 316 MLVLSKQN---PEMFEDQGIDFFITNIGEGTDIKAVEVARQLRSLGFSAQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            Q + ADR      +  G  E + G L +K L+ G++ S E  + E 
Sbjct: 372 AQFRKADRVGARYVVTLGAKELAEGKLTVKRLSDGQQFSLEFTDLED 418


>gi|238794829|ref|ZP_04638430.1| Histidyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238725842|gb|EEQ17395.1| Histidyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 444

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 98/470 (20%), Positives = 183/470 (38%), Gaps = 68/470 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + + +  D  
Sbjct: 24  NIQAIRGMNDYLPADTAIWQRIESILKQVLAGYGYSEIRMPIVEQTPLFKRAIGEVTDVV 83

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+   GR+R
Sbjct: 84  EKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYERPQKGRYR 143

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDG 177
           QF Q   +  G      DAE+ ++ A    A+G                   + R+ L  
Sbjct: 144 QFHQLGAEVFGLQGPDIDAELILLTARWWRALGISEHVQLELNSIGSLDARADYREALVT 203

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE+     D+            D   +     +++L  +              L     
Sbjct: 204 FLEQHVEVLDE------------DCKRRMYSNPLRVLDSKN---------PDVQLLLNDA 242

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  +L  + ++    L EL+                          S    ++  +VR
Sbjct: 243 PKLSEYLDEESKQHFAGLCELLD-----------------------QASIPYTVNERLVR 279

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ R
Sbjct: 280 GLDYYNRTVFEWVTNS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLER 331

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           L++ ++++ +   + +    V +  +    D+ S   +  + LR A   ++     G   
Sbjct: 332 LVLLVQAVNA---DFQVPATVDVYVISSGQDTQSAAMLLAENLRDAMPTLKLMTNYGGG- 387

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           N   Q   AD+    +A++ G  E +   + +KDL  G++ +    +  +
Sbjct: 388 NVKKQFTRADKWGARVALMLGESEVAAQQVVVKDLRNGEQETLAQADVAA 437


>gi|327471768|gb|EGF17209.1| histidine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 426

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 93/463 (20%), Positives = 170/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFKKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDAESSTYFATVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    +     + +      + +  +     Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV---ELPIETALDVYVAVLGASANGRALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADNFKAKTLITLGESEVESGRVTVKNNHNREEITVSLDQIQE 415


>gi|164687517|ref|ZP_02211545.1| hypothetical protein CLOBAR_01158 [Clostridium bartlettii DSM
           16795]
 gi|164603291|gb|EDQ96756.1| hypothetical protein CLOBAR_01158 [Clostridium bartlettii DSM
           16795]
          Length = 420

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 105/486 (21%), Positives = 180/486 (37%), Gaps = 69/486 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           + ++ PRG  D   K++   + +    R I   YG++ I TP+ E+++   + + D  D 
Sbjct: 1   MLSKAPRGTKDITPKDVYKWHYVEKKFREICALYGYEEIRTPIFEHTEVFARSVGDTTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
             K ++S  D   + +SL+ + TA + R   EN       P + Y I P FR E+   GR
Sbjct: 61  VQKEMYSFTDRGDRQLSLKPEGTAGVIRSFIENKMYADTQPTKLYYITPCFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
            RQF Q  ++ +GS   + DAE+  +       +G+K        +      +    K+ 
Sbjct: 121 QRQFHQFGIEVLGSDGPSVDAEVISLAVQFFNEMGLKNLSVNINSVGCPTCREEYNRKLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            + D K++           L++     ++++  +                 + I  M+  
Sbjct: 181 EYLDKKVDVLCETC-----LERKDKNPMRVIDCKNPH---------CKENLQDIPFMIDH 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +    +L   +K                              +  TIVRGL+YY 
Sbjct: 227 LCEDCKDHFDKLQTYLKE-----------------------MDINYVVDKTIVRGLDYYK 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E I                +V GGGRYDGLV    G                  L 
Sbjct: 264 KTAFEIISND--------IGSQSTVCGGGRYDGLVEMLGGPK--GISGIGFALGAERLLL 313

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +LE++   I+      I        + +K     + LRT  I A+      K+   Q KY
Sbjct: 314 TLENNNIEIENPKSTDIYIATIGDAAKTKSFKLIKDLRTNHISADNDH-LDKSLKAQFKY 372

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           +D+ N    ++ G  E +     +K++   ++                   TI +SELV 
Sbjct: 373 SDKLNAKYTVVIGDDELANDTATLKNMKTSEQT------------------TIKLSELVD 414

Query: 484 TVKKIL 489
            +KK L
Sbjct: 415 ELKKRL 420


>gi|227524426|ref|ZP_03954475.1| histidyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088385|gb|EEI23697.1| histidyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 430

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 103/493 (20%), Positives = 188/493 (38%), Gaps = 67/493 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G AD   +E R    + ++ R ++ +Y +  I TP+ E  D   +   D  D 
Sbjct: 1   MRYQRPKGTADILPEEARKWTYVEETARMLFNDYRYQEIRTPMFENFDVFSRTSGDTSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR---TYRIGPVFRNEKHGP 122
             K ++  +D   + ISLR + TA + R   EN        R    + +G +FR E+   
Sbjct: 61  VTKEMYDFKDKGDRHISLRPEGTAGVVRAFVENKLYGPEHQRPVKVFYMGSMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V++ GS     D E+  M  D L   G+K     I             + 
Sbjct: 121 GRQREFHQIGVEDFGSDEPELDVEVIAMGMDLLHHFGLKDIRLEINSLGDAASRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   D   + L    + D   +     +++L  + + D             +    ++ 
Sbjct: 181 LIDYLDPHFDEL----SKDSQVRLHKNPLRVLDSKDKQDQE---------IVKDAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D +K    + +L+                               I   +VRGL+YY
Sbjct: 228 YLNDDSKKHFERVKKLLDTL-----------------------HIPYVIDPDMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E ++    + E        ++  GGRY+GLV +  G  +P  GF +G+ RL++ +
Sbjct: 265 THTIFEIMVDSKALGEGYT-----TICAGGRYNGLVEQLGGPEMPGIGFGLGMERLMLLM 319

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +          +  +    +     +  +     Q LR  G  A+     ++    Q K
Sbjct: 320 DAQGV---KFPVLDQLDAYVVGIGEQTSIETLKIVQALRANGFAADRDY-LNRKPKAQFK 375

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            AD+ N    I  G  E       +K +A GKE+                   +PI +++
Sbjct: 376 SADKLNAQYTITIGESELESHTANVKSMASGKEI------------------NVPIDKII 417

Query: 483 STVKKILQENKEE 495
           +   +I+  N  +
Sbjct: 418 NDFDEIITSNFND 430


>gi|81428473|ref|YP_395473.1| histidyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123755849|sp|Q38XB7|SYH_LACSS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|78610115|emb|CAI55164.1| Histidyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 434

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 96/472 (20%), Positives = 181/472 (38%), Gaps = 51/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD    E      +  + R+++  Y F  I TPL E  D   +   D  D 
Sbjct: 1   MGYQKPKGTADILPGESDQWQLVEKTARDVFARYQFKEIRTPLFESYDVFSRSSGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VSKEMYDFMDKGDRHIALRPEGTAGVVRAFVENKLYGPEHQKPYKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEK 181
           GR RQF Q  V++ GS +   D E+  M    L    I         + +        E 
Sbjct: 121 GRQRQFHQIGVESFGSESPAVDVEVISMAMRLLREFKITDLKLAINTLGDAASRAAYHEA 180

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +  + +    E      + D   +     +++L  +   D             +   +++
Sbjct: 181 LVNYLEPHFEEL-----SDDSKVRLHKNPLRVLDSKDAKDQE---------IVKDAPVIL 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L+ + +   + +  L++      +   E+                       VRGL+Y
Sbjct: 227 DYLTDEAKVHFNTVKTLLESLNIPYEVDTEM-----------------------VRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   ++E +    V+      V       GGRY+GLV +  G ++P  GF +G+ RL++ 
Sbjct: 264 YNHTIFEIMTSNKVLGRGYTTV-----LAGGRYNGLVEQLGGPDMPGVGFGLGVERLLLL 318

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           + +  S       +       +   +++ +      + LR AG+ A+      +    Q 
Sbjct: 319 MNAQNSDLVAAPVLDA---YVVGIGAETSATTLHLVESLREAGLTADRDY-LDRKPKAQF 374

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K A++ N    +  G  E +     +KD+  G E++  +   E+   A   +
Sbjct: 375 KTANKLNAQFVVTIGESELADKTAHVKDMTSGVEITVPLTTLEADFAAVKNE 426


>gi|16079810|ref|NP_390634.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310694|ref|ZP_03592541.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315018|ref|ZP_03596823.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319939|ref|ZP_03601233.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324220|ref|ZP_03605514.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|3122900|sp|O32039|SYH_BACSU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|2635220|emb|CAB14715.1| histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 424

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 95/461 (20%), Positives = 179/461 (38%), Gaps = 51/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E      +   +R+    Y +  I TP+ E+++   + + +  D 
Sbjct: 1   MGYNIPRGTQDILPGESDRWQFVEQIMRDTCRTYQYKEIRTPIFEHTELFARGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV--FPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA   R   EN        P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFEDRKGRSLTLRPEGTAAAVRAFNENKLFANPVQPTKLYYVGPMFRYERPQTG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF Q  ++ +GS     DAE+  +     E  G++     I    ++       E +
Sbjct: 121 RYRQFYQFGIEAIGSKDPAIDAEVMALAMSIYEKAGLENVKLVINSLGDQDSRKSYREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + ++ E        D   +     +++L  +   D+            +    +++
Sbjct: 181 VKHFEPRIEEF-----CSDCQSRLHTNPLRILDCKKDRDHE---------LMKSAPSILT 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ +      ++ + +       +    L                       VRGL+YY
Sbjct: 227 YLNEESAAYFEKVKQYLNDLGISYEIDPNL-----------------------VRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +                ++ GGGRYDGLV +  G   P  GF++ I RL+ A+
Sbjct: 264 NHTAFEIMSNAEGF------GAITTLAGGGRYDGLVEQIGGPEAPGIGFAMSIERLLAAI 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            + +      K +   ++T       +          LR AGI +E+    +K    Q K
Sbjct: 318 DAEKRELPVDKGIDCYIVTL---GEKAKDYSVSLVYKLREAGISSEIDY-ENKKMKGQFK 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            ADR       I G  E ++  + +KD   G+++   +   
Sbjct: 374 TADRLKARFIAILGEDELAQNKINVKDAQTGEQIEVALDEF 414


>gi|237713808|ref|ZP_04544289.1| histidyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262409285|ref|ZP_06085828.1| histidyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294644704|ref|ZP_06722453.1| histidine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294805935|ref|ZP_06764802.1| histidine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229446255|gb|EEO52046.1| histidyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262352737|gb|EEZ01834.1| histidyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292639967|gb|EFF58236.1| histidine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294446817|gb|EFG15417.1| histidine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 454

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 151/505 (29%), Positives = 218/505 (43%), Gaps = 79/505 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++        I    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSRFNI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILSGIAEIIGESDK-----IVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++  +  G KG  E   I   +   
Sbjct: 227 ------GISDEAIAKLQPIILLSGTNAEKLATLKNVLSASEVGLKGVEESEFILNTLETM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S        +R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTELLFINFGEKEAAYS--MGILAKVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           A IRAE+F  ++K    Q+ YA+ +N P   I G  E + G + +K++  G++       
Sbjct: 389 ANIRAEIFPDAAK-MKKQMSYANAKNIPFVAIVGENEMNEGKVMLKNMETGEQN------ 441

Query: 463 NESWREARVAQITIPISELVSTVKK 487
                        +   EL++ VKK
Sbjct: 442 ------------LVSADELIAIVKK 454


>gi|225857695|ref|YP_002739206.1| histidyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254782351|sp|C1CNA0|SYH_STRZP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|225726000|gb|ACO21852.1| histidyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|332071392|gb|EGI81886.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 429

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 101/461 (21%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRAYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E  +M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVSQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E     + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESRQVTVKNNQTREEVQVSLETI 413


>gi|86130169|ref|ZP_01048769.1| Histidyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818844|gb|EAQ40003.1| Histidyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 460

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 146/504 (28%), Positives = 227/504 (45%), Gaps = 72/504 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+  R+ I+++IR  ++ +GF PIETP  E S +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPEEVAKRSYIMNTIRTQFQRFGFQPIETPSFENSSTLMGKYGEEGDRL 63

Query: 65  ---RPNKGVFSLQDDDG--------------QWISLRYDLTAPLARYVAENFDTIVFPCR 107
                N G +  +  D                  +LRYDLT P ARYV ++ + IVFP +
Sbjct: 64  IFKILNSGDYLRKVKDDAFAKADSTALTPQISEKALRYDLTVPFARYVVQHQNDIVFPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            +++ PV+R ++   GRFR+F QCD D VGS +   + E   +      A+  K     I
Sbjct: 124 RFQMQPVWRADRPQKGRFREFYQCDADVVGSDSLWQEVEFVQLYDAVFSAL--KLEGVTI 181

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +NNRK+L GI E IG          +    A+DKLDK G +GV   +            
Sbjct: 182 KMNNRKVLSGIAEVIGASDK-----LIDFTVALDKLDKIGEEGVTKEML----------- 225

Query: 228 KGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               +T E I+ +     LS      +  L  L+  +  G +G NEL+ I++ +   G  
Sbjct: 226 -AKGITQEAIEKVAPLFTLSGSFGDQLATLKTLLADSETGMEGINELLFINDAIENLGLQ 284

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +  +++  T+ RGL YYTG ++E      V          GS+GGGGRY  L   F  ++
Sbjct: 285 TATLQLDVTLARGLNYYTGAIFEVSAPEGVK--------MGSIGGGGRYADLTGIFGLKD 336

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G+ R+ + ++ L        E   V                     LR AGI
Sbjct: 337 MSGVGISFGLDRIYLVIEELGLFPEEATEGIKVFFVNFGDQEA--GYAMQAISKLRQAGI 394

Query: 406 RAEMFLG---SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            AE++     S+K    Q+ YA+RRN P  ++ G  E       +K++A+G         
Sbjct: 395 SAELYPDAVTSNKQMKKQMTYANRRNIPFLVLAGKEEMDAKQYTLKNMAEG--------- 445

Query: 463 NESWREARVAQITIPISELVSTVK 486
                    +Q T+ I ELV+ +K
Sbjct: 446 ---------SQETVNIDELVAALK 460


>gi|15643847|ref|NP_228896.1| histidyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|7674351|sp|Q9X0H5|SYH_THEMA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|4981634|gb|AAD36166.1|AE001768_15 histidyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 420

 Score =  256 bits (653), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 115/472 (24%), Positives = 191/472 (40%), Gaps = 60/472 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++    +G  D   +EI     + ++ RN+ E+ G + I TP+ E ++   + + +E D 
Sbjct: 1   MKYRRIKGTNDIFGEEIWYWRYVEETFRNVCESAGIEEIRTPIFEQTELFVRSVGEESDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ QD  G+ I+LR + TAP+ R   EN      F  R Y IGP+FR EK   GR
Sbjct: 61  VQKEMYTFQDKAGRSITLRPEGTAPVVRAFLENSLIDRGFQQRYYYIGPMFRYEKPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH----IGINNRKILDGILE 180
            RQF Q   + +G  +  AD E+ M++   L  +G+ +   H         RK     L+
Sbjct: 121 LRQFHQVGFEIIGPESPKADFEVIMLVDTFLRRLGLTKYKIHLNSIGCPVCRKNYREALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D L          D   ++    ++LL  +   + S +               
Sbjct: 181 EYYGRILDNL--------CDDCKRRYETNILRLLDCKVDHEYSLN-----------APKS 221

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           V +L         +L E +                                  T+VRGL+
Sbjct: 222 VDYLCDSCRAHYKKLKEYL-----------------------NTFEIEYVEDHTLVRGLD 258

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E           +      ++ GGGRYDGL +   G +VPA GF+ GI R+I+
Sbjct: 259 YYTRTVFEV--------RHEGLGAQSAIAGGGRYDGLFAELGGSSVPALGFAGGIERIIL 310

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+       I      L+        +          LR  G+  ++ +   +    Q
Sbjct: 311 ALKAEGI---EIPMKNVHLVYIATLGEKAFMDGVRLAGELRKKGLSVDVDI-MDRKLSGQ 366

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           LK+A R     A+I G  E  +G++ ++DL  G ++  +      +   RV+
Sbjct: 367 LKHASRMGSRYAVIIGDEELEKGIVILRDLETGDQVEIDRDFAADYIAERVS 418


>gi|113868337|ref|YP_726826.1| histidyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123032872|sp|Q0K963|SYH_RALEH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|113527113|emb|CAJ93458.1| Histidyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 456

 Score =  256 bits (653), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 104/490 (21%), Positives = 191/490 (38%), Gaps = 80/490 (16%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  +G  D    +  +     ++ R +   YG+  I TP++E++    + + +  D   
Sbjct: 25  LQGVKGMNDMLPADAPLWEHFENAARAMLRAYGYQQIRTPIVEHTQLFVRGIGEVTDIVE 84

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++S  D  +G+ ++LR + TA   R   E+      P R +  GP+FR+E+   GR+R
Sbjct: 85  KEMYSFTDSLNGEQLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHERPQRGRYR 144

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           QF Q   + +G +    DAE+ +M     + +G              H    +R+ L   
Sbjct: 145 QFHQLGAEALGFAGPDVDAEIILMCQRLWDDLGLVGVRLELNSLGQAHERAAHREQLIKY 204

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           LE      DD            D   +     +++L  +                     
Sbjct: 205 LEGFQDILDD------------DSKRRLYTNPLRVLDTKNPALQEMAA---------NAP 243

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ FL  +       +  L+K                         +   KI+  +VRG
Sbjct: 244 KLIDFLGEESLAHFEGVQRLLKAN-----------------------NIPFKINPRLVRG 280

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E I          K    G++ GGGRYD L+++  G+  PA G+++GI R+
Sbjct: 281 LDYYNLTVFEWIT--------DKLGAQGTIAGGGRYDPLIAQMGGKPAPACGWAMGIERI 332

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF---LGSSK 415
           I  ++          +     +  +     +  +  +  + LR AG+   +     G   
Sbjct: 333 IELIREEGVVP----DAAGCDVYLVHQGEAAAQQAMIAAERLRDAGLDVVLHASPDGKGG 388

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +F +Q+K AD      A+I G  E + G++Q+K+L + ++            E    Q T
Sbjct: 389 SFKSQMKRADTSGAAYAVIIGDDEVAAGVVQVKELRQREQ-----------AEGGGQQAT 437

Query: 476 IPISELVSTV 485
           +P   LV  +
Sbjct: 438 VPAEGLVDYL 447


>gi|327404693|ref|YP_004345531.1| histidyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327320201|gb|AEA44693.1| histidyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 456

 Score =  256 bits (653), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 134/484 (27%), Positives = 215/484 (44%), Gaps = 59/484 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRP 66
           +  +P+G  D    E+  R  I D+I+++++ YGF PIETP  E S   LGK+  + DR 
Sbjct: 4   KPAIPKGTRDFLPDEVARRTYIFDTIKSVFKTYGFAPIETPSFELSSTLLGKYGEEGDRL 63

Query: 67  NKGVFSLQDDDGQW----------------------ISLRYDLTAPLARYVAENFDTIVF 104
              +F + +   +                        +LRYDLT P AR+V ++ + + F
Sbjct: 64  ---IFRILNSGEKMKKADLDALKSENLARFANSLSEKALRYDLTVPFARFVVQHQNELSF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+++F QCD D VGS +   + +   +    L  + I    
Sbjct: 121 PFKRYQIQPVWRADRPQHGRYQEFYQCDADVVGSDSLLYEVDFVQIFDQVLTNLQIPG-- 178

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
           + + INNRKIL GI E  G          + +  AIDKLDK G +GV   L E       
Sbjct: 179 FTVKINNRKILSGIAEVSGESDK-----IIDITVAIDKLDKIGEEGVVKELLEK------ 227

Query: 225 DFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ + I I+     I    E  ++++   +K +  G KG  EL  +     + 
Sbjct: 228 ------GVSEKAIGIISPLFQITGSNEDRLNQMKTFLKNSEIGLKGIEELEFVLNQTTEL 281

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G     ++   T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 282 GLERAEVEFDVTLARGLNYYTGAIFEV---------KVHDVKMGSICGGGRYDDLTGLFG 332

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +   G S G  R+   L  L+    N      + +   +      +     T+ LR 
Sbjct: 333 LSGLSGVGISFGADRIYDVLNELDLYPEN--TNAGLTLLFANFGEKEATYCLKLTKKLRQ 390

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            G+  E++   +K    Q KYAD R      I G  E ++G++Q+K++  G++      +
Sbjct: 391 NGLDCEVYPSVAK-MQKQFKYADNRKVKFVAIVGEDELNKGIIQLKNMESGEQKELTESD 449

Query: 463 NESW 466
              +
Sbjct: 450 LLQF 453


>gi|126700355|ref|YP_001089252.1| putative histidyl-tRNA synthetase [Clostridium difficile 630]
 gi|254976335|ref|ZP_05272807.1| putative histidyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255093720|ref|ZP_05323198.1| putative histidyl-tRNA synthetase [Clostridium difficile CIP
           107932]
 gi|255101911|ref|ZP_05330888.1| putative histidyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255307780|ref|ZP_05351951.1| putative histidyl-tRNA synthetase [Clostridium difficile ATCC
           43255]
 gi|255315472|ref|ZP_05357055.1| putative histidyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518135|ref|ZP_05385811.1| putative histidyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651251|ref|ZP_05398153.1| putative histidyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|255656727|ref|ZP_05402136.1| putative histidyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|260684315|ref|YP_003215600.1| putative histidyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687974|ref|YP_003219108.1| putative histidyl-tRNA synthetase [Clostridium difficile R20291]
 gi|296452446|ref|ZP_06894147.1| histidine--tRNA ligase [Clostridium difficile NAP08]
 gi|296877795|ref|ZP_06901821.1| histidine--tRNA ligase [Clostridium difficile NAP07]
 gi|306521095|ref|ZP_07407442.1| histidyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|122973671|sp|Q183H5|SYH_CLOD6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|115251792|emb|CAJ69627.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Clostridium difficile]
 gi|260210478|emb|CBA64951.1| putative histidyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213991|emb|CBE06103.1| putative histidyl-tRNA synthetase [Clostridium difficile R20291]
 gi|296258776|gb|EFH05670.1| histidine--tRNA ligase [Clostridium difficile NAP08]
 gi|296431246|gb|EFH17067.1| histidine--tRNA ligase [Clostridium difficile NAP07]
          Length = 420

 Score =  256 bits (653), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 94/470 (20%), Positives = 174/470 (37%), Gaps = 57/470 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   KE      + +  R I   YG++ + TP+ E+++   + + D  D 
Sbjct: 1   MLTKAPRGTKDITPKEAYKWRYVENKFREICALYGYEEMVTPIFEHTELFKRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
             K ++S +D   + I+L+ + TA + R   EN       P + + + P FR E+   GR
Sbjct: 61  VQKEMYSFKDKGDREITLKPEGTAGVVRAFIENKLYADTQPTKLFYVTPCFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQF Q  ++ +GS   + DAE+  +       VG+       +       RK  + +L+
Sbjct: 121 QRQFHQFGIEALGSDTPSMDAEIIALAVQFFNEVGLNDLVVSINSVGCPVCRKEYNALLK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D L +     R          +   + + + +     +  K        I  +
Sbjct: 181 EYLDSKADILCDTCNERR----------EKNPMRVIDCKNPTCKENIKD-------IPFI 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L  D +    +L E +K                         +    I  TIVRGL+
Sbjct: 224 ADHLCDDCKSHFDKLQEYLKE-----------------------MNINFVIDKTIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY    +E I                +V GGGRYDGLV +  G    +          ++
Sbjct: 261 YYRKTAFEIISND--------IGAQSTVCGGGRYDGLVEQLGGPKGISGIGFGLGIERLL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                        +   + I T+  ++++ S      + LR   I A+      ++   Q
Sbjct: 313 LTLEGNGIEIENPQSTDIFIVTIGEEANTRS--FKLLKDLRQNHISADKDHIE-RSVKAQ 369

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            KY+D+ N    I+ G  E       +K++   ++ + ++       + +
Sbjct: 370 FKYSDKINSKFTIVIGDDELKNDTATLKNMKTSEQTTVKLSTLVEELKQK 419


>gi|28378623|ref|NP_785515.1| histidyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556838|ref|YP_003063255.1| histidyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300768151|ref|ZP_07078056.1| histidine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180779|ref|YP_003924907.1| histidyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|32130098|sp|Q88VQ7|SYH_LACPL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|28271459|emb|CAD64364.1| histidine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045765|gb|ACT62558.1| histidyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300494215|gb|EFK29378.1| histidine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046270|gb|ADN98813.1| histidyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 426

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 95/462 (20%), Positives = 182/462 (39%), Gaps = 51/462 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G AD    +      +  + R +++ Y F  I TP+ E  +   +   D  D 
Sbjct: 1   MRYQRPKGTADILPGDSEKWQYVEATARAVFKTYQFKEIRTPMFENFEVFSRSAGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF---PCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAGVVRAFVENKLYGPQVLKPYKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEK 181
           GR R+F Q  V+  GS +   D E+  M  + L+  G+      I    +++  D   + 
Sbjct: 121 GRLREFHQLGVEAFGSESAALDVEVIAMGYNLLKTFGLTDLKLVINTLGDQQTRDDYRQA 180

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +  + +   +E      + D  ++     +++L  +   D                  ++
Sbjct: 181 LIDYLEPHFDEL-----SDDSKERLHKNPLRVLDSKAPEDQQF---------VADAPSIL 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +LS + +    +    +                          +   +I +T+VRGL+Y
Sbjct: 227 DYLSPEAQAHFDQTKTYLDAL-----------------------AIPYEIDATMVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   ++E +     + +        ++  GGRY+GLV    G  V   GF +G+ RL+V 
Sbjct: 264 YNHTIFEIMTHSKALGKGYT-----TICAGGRYNGLVKELGGPEVSGVGFGLGVERLLVL 318

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           + +   +   +     + +  +     + +      Q LR AG +AE      +    Q 
Sbjct: 319 MDAENIA---VPTDDQLDVYVVGIGDTASATTLKLVQALRAAGYKAERDY-LDRKPKAQF 374

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           K ADR N    +  G  E +  ++ +K +A G+E    + + 
Sbjct: 375 KSADRLNARYTMTVGETELADQVVNLKAMATGEETKVAMADI 416


>gi|238797965|ref|ZP_04641455.1| Histidyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238718170|gb|EEQ09996.1| Histidyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 424

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 98/477 (20%), Positives = 181/477 (37%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAIWQRIESILKQVLAGYGYSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ ++ A    A+G                   +
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELILLTARWWRALGISEHVQLELNSIGSLDARAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YREALVTFLEQHVEVLDE------------DCKRRMYSNPLRVLDSKNPEVQQ------- 217

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+            L                  
Sbjct: 218 --LLNDAPKLSDYLDEESKQHFAGLCELLDKASIPYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVTNS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++ +   + +    V +  +    ++ S   +  + LR A   ++  
Sbjct: 305 FAMGLERLVLLVQAVNA---DFQVPATVDVYVISSGQNTQSAAMLLAESLRDAMPTLKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              G   N   Q   AD+    +A++ G  E +   + +KDL  G++ +    +  +
Sbjct: 362 TNYGGG-NVKKQFTRADKWGARVALMLGESEVAAQKVVVKDLRNGEQETLAQADVAA 417


>gi|148992030|ref|ZP_01821804.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|149011982|ref|ZP_01833130.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|149020031|ref|ZP_01835005.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168489187|ref|ZP_02713386.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147763937|gb|EDK70870.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147929079|gb|EDK80090.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147930709|gb|EDK81690.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|183572296|gb|EDT92824.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332071558|gb|EGI82051.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 429

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 180/461 (39%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E  +M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFATKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|218708642|ref|YP_002416263.1| histidyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782355|sp|B7VJT9|SYH_VIBSL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|218321661|emb|CAV17615.1| Histidyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 422

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 102/477 (21%), Positives = 185/477 (38%), Gaps = 73/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++  +++++   YG++ +  P++E ++   + +
Sbjct: 1   MAKN----IQAIRGMNDCLPTQSPLWQKVESAVKSVVSAYGYNEVRMPIVEETNLFSRAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEETDVVSKEMYTFDDRNGDSLTLRPEGTAGCVRSCIQNSLINRDEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G      DAE+ MM A     +G                  ++
Sbjct: 117 PQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSQEDRVS 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALVAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  + ++    L EL+       +    L                  
Sbjct: 216 QAILGDAPRLSEYLGEESKQHFAGLCELLDAVGIEYQVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I               G+V GGGRYDGLV +  G+   A G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------DSLGAQGTVCGGGRYDGLVEQLGGKATNAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAE 408
           F++G+ RL++ +++LE +         V +  +     ++         LR    G+R  
Sbjct: 305 FAMGLERLVLMMETLELTEVRRS----VDVYMVAAGEGTMIAGMQLANQLRDTVEGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           M      NF  Q K AD+    +A++ G  E +   + +KDL  G++ +        
Sbjct: 360 MNHFGGGNFKKQFKRADKVGAVVALVLGENEVADNTVVLKDLVGGEQQTVSQTEVAE 416


>gi|332364081|gb|EGJ41858.1| histidine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 426

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 93/463 (20%), Positives = 169/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      +    R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEGFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GS+    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSNNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSNYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+    V +  +   ++         Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV-ELPIETALDVYVAVLGPGANGR--ALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADTFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQIQE 415


>gi|319902938|ref|YP_004162666.1| histidyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319417969|gb|ADV45080.1| histidyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 453

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 149/481 (30%), Positives = 218/481 (45%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIREVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGLTDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNAELREK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     L+ + E+ +  L E++  +  G KG  E   I   ++  
Sbjct: 227 ------GISDEAIAKLQPIILLNGNNEEKLATLKEVLAASETGRKGVEESEFILSTLKNL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LENEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  L        +   +L         + S        +R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLNLYPKEAVDGTQLLFINFGEREAAFS--MNVLAQVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            GIRAE+F  SSK    Q+ YA+ +  P   + G  E + G + +K++  G++     K 
Sbjct: 389 VGIRAEIFPDSSK-MKKQMGYANSKAIPFVALVGENEMNEGKVTLKNMETGEQKLVSPKE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|298208642|ref|YP_003716821.1| histidyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83848565|gb|EAP86434.1| histidyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 456

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 132/481 (27%), Positives = 219/481 (45%), Gaps = 58/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I+D+I++ ++N+GF PIETP  E S +L GK+  + DR 
Sbjct: 4   KPSIPKGTRDFSPIEVSKRNYIVDTIKSKFQNFGFQPIETPSFENSATLMGKYGDEGDRL 63

Query: 67  NKGVFSLQDDDG----------------------QWISLRYDLTAPLARYVAENFDTIVF 104
              +F + +                            +LRYDLT P ARYV ++ + I F
Sbjct: 64  ---IFKILNSGDFLKKVDDTTYAEKDSLVMTPKISEKALRYDLTVPFARYVVQHQNEIDF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GRFR+F QCD D VGS +   + +   +      A+ +  + 
Sbjct: 121 PFKRYQIQPVWRADRPQKGRFREFYQCDADVVGSKSLFQEVDFIQLYDSVFTALNL--DG 178

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRK+L G  E IG          +    A+DKLDK G + VK  +         
Sbjct: 179 TTIKMNNRKVLSGFAEVIGASDK-----LIDFTVALDKLDKIGEENVKEEML-------- 225

Query: 225 DFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +    ++       +  +  +++ +  G +G  EL  I E + + 
Sbjct: 226 ----TKGISEEAISKIQPIFNVSGSFSDKIETVKSILESSEIGMEGIKELEFIQEAISQL 281

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
              +  + +  T+ RGL YYTG ++E            + V  GS+GGGGRYD L   F 
Sbjct: 282 PLQTATLDLDITLARGLNYYTGAIFEV--------SAPEGVSMGSIGGGGRYDDLTGIFG 333

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            +++   G S G+ R+ + L+ L    + + E   VL                  + LR 
Sbjct: 334 LKDMSGVGISFGLDRIYLVLEELNKFPDTVSENTKVLFVNFGETEAL--YAMQAIKKLRA 391

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            G+ AE++    K  G Q  YA++RN P  ++ G  E +  +L +K +  G++    ++ 
Sbjct: 392 NGVSAELYPD-KKKMGKQFDYANKRNIPFVVVAGETEIANDLLALKSMKTGEQEDVSLQT 450

Query: 463 N 463
            
Sbjct: 451 L 451


>gi|209694319|ref|YP_002262247.1| histidyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208008270|emb|CAQ78415.1| histidyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 424

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 106/458 (23%), Positives = 191/458 (41%), Gaps = 51/458 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  DC   +  + +++ DS++ +   YG+  I  P++E +    + + +  D   
Sbjct: 7   IQAIRGMNDCLPTQSPLWHKVEDSVKRVISAYGYSEIRMPIVEQTHLFKRAIGEVTDVVE 66

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++  D +G  ++LR + TA   R   EN        R + +GP+FR+E+   GR+RQ
Sbjct: 67  KEMYTFDDRNGDSLALRPEGTAGCVRAGIENGLLYNQEQRLWYMGPMFRHERPQKGRYRQ 126

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+  G +    DAE+ MM A     +GI ++  H+ +N+   L+       +  +
Sbjct: 127 FHQVGVEVFGLNGPDVDAELIMMTARLWRELGIDKH-VHLELNSIGSLEARANYRVVLIE 185

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               E+ + +   D   +     +++L  +     +                +  +L  D
Sbjct: 186 --FLEQHLDILDEDCKRRMYTNPMRVLDTKNPAVQA---------ILGDAPKLSEYLDDD 234

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +     L EL+       +    L                       VRGL+YY   V+
Sbjct: 235 SKAHFSGLCELLDAAGIQYQVNERL-----------------------VRGLDYYNRTVF 271

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +         +     G+V  GGRYDGLV +  G+   A GF++G+ RL++ +++LE 
Sbjct: 272 EWVT--------ESLGAQGTVCAGGRYDGLVEQLGGKETSAVGFAMGLERLVLLMETLEL 323

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYAD 425
           +         V I  +   +D+L       + LR    G+R     G   NF  Q K AD
Sbjct: 324 TDVRRS----VDIYMVTSGADTLMAGMKLAERLREQVPGLRVMCHFGGG-NFKKQFKRAD 378

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
                +A+I G  E +   + +KDL  G++ +    + 
Sbjct: 379 NAGAAVALILGESEVAELTVNVKDLRTGEQETFAQADV 416


>gi|323350735|ref|ZP_08086396.1| histidine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123155|gb|EFX94846.1| histidine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 426

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 94/463 (20%), Positives = 169/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSTYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+    V +  +   ++         Q LR  G   E      +    Q K
Sbjct: 317 DKQGV-ELPIETALDVYVAVLGAGANGR--ALELVQALRAQGFAVERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADIFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQIQE 415


>gi|227534982|ref|ZP_03965031.1| histidyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227187373|gb|EEI67440.1| histidyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 427

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 189/476 (39%), Gaps = 61/476 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD    +     ++    R I+  Y +  I TP+ E  D   +   D  D 
Sbjct: 1   MNYQRPKGTADILPGQSERWQQVEAVARKIFAQYQYHEIRTPIFENVDVFSRSAGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K +++ +D   + I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYTFKDKGDRMIALRPEGTAGVVRAYVENKLYGPEHAKPYKVYYLGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR RQF Q  V+  GS +   DAE   +    LEA+  K   + I        RK     
Sbjct: 121 GRQRQFHQIGVEAFGSDSPVLDAETLALAKQLLEALSAKHLKFVINSLGDPATRKAFHAA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  + + D                 
Sbjct: 181 LVDYLTPFKDQLSE--------DSKVRLVKNPLRILDSKDKHDQE---------IVANAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ + ++    +  L++G                            ++ +T+VRG
Sbjct: 224 SILDYLTPEAQQHFDRVKTLLQGL-----------------------GIPFEVDATMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E +      ++K     + ++  GGRY+GLV    G   P  GF++G+ RL
Sbjct: 261 LDYYNHTIFEVM-----SDDKVFGGGYTTILAGGRYNGLVEELGGPETPGIGFAMGVERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++                I T+D  +D   +       +R  G   EM     +   
Sbjct: 316 MLLMQ-----GELPTAQPDAYIVTIDQGAD--QEALQMLTAIRQQGFTGEMDY-MGRKPK 367

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            Q K A++ N  L +  G  ER+ G +QIK++A G + +    +  +       Q+
Sbjct: 368 GQFKAANKANAKLVLTIGESERAAGTVQIKNMATGDQQAFPQADVLADFGKIYTQV 423


>gi|152995386|ref|YP_001340221.1| histidyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189082300|sp|A6VV07|SYH_MARMS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|150836310|gb|ABR70286.1| histidyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 424

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 100/470 (21%), Positives = 197/470 (41%), Gaps = 57/470 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    +  +   +  ++ ++ ++YG+  I  P++E +D   + + +  D  
Sbjct: 4   KIQAIRGMNDILPDQSSVWLYLEKTVADVVKSYGYQQIRFPIVENTDLFKRGVGETTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G+ ++LR + TA   R   +         R +  GP+FR E+   GR+R
Sbjct: 64  EKEMYTFDDRNGESLTLRPEGTASCVRAADQAGLLFNQTQRLWYTGPMFRYERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q  V++ G +    DAE+ ++ A   + +G+  +     +     + R+     L +
Sbjct: 124 QFHQIGVESFGMATADIDAELIILSARLWQKLGLLEHVELQLNTIGLASEREAYKAALVE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        D   +     +++L  +  +  +           +    + 
Sbjct: 184 YLTEFKDQLDE--------DSQRRLSTNPLRILDSKDESTQA---------ILKNAPNLE 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+  + +     L  ++K                              I+  +VRGL+Y
Sbjct: 227 DFIGEESQAHFDLLQAILKAN-----------------------GIPYVINRRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +                +V  GGRYDGLV +  G++ PA GF++GI RL++ 
Sbjct: 264 YGKTVFEWVTT--------HLGSQATVCAGGRYDGLVEQLGGKSTPAVGFAMGIERLVLL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR-AEMFLGSSKNFGNQ 420
           L++L    +  K    V + +M  D++      +  + LR        +      NF NQ
Sbjct: 316 LETLNLIPDAAKFSTDVFVISMGDDAEL--ASFVLAERLREENSNLVVLRHCGGGNFKNQ 373

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           +K ADR      I+ G  E  +G+ Q+KD++ G++    I +  ++  A+
Sbjct: 374 MKKADRSEARFTIVLGQDEIDKGICQLKDMSTGEQQPHSIDDVATYINAK 423


>gi|325695668|gb|EGD37567.1| histidine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 426

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 93/463 (20%), Positives = 169/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D          +  E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDK---------VAVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESCAYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    +     + +      + +  +     Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV---ELPIETALDVYVAVLGASANGRALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADIFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQIQE 415


>gi|281413080|ref|YP_003347159.1| histidyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281374183|gb|ADA67745.1| histidyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 420

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 113/472 (23%), Positives = 190/472 (40%), Gaps = 60/472 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++    +G  D   +EI     + ++ RN+ E+ G + I TP+ E ++   + + +E D 
Sbjct: 1   MKYRRIKGTNDIFGEEIWYWRYVEETFRNVCESAGIEEIRTPIFEQTELFVRSVGEESDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ QD  G+ I+LR + TAP+ R   EN      F  R Y +GP+FR EK   GR
Sbjct: 61  VQKEMYTFQDKAGRSITLRPEGTAPVVRAFLENSLVDRGFQQRYYYVGPMFRYEKPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH----IGINNRKILDGILE 180
            RQF Q   + +G  +  AD EM +++   L  +G+ +   H         RK     L+
Sbjct: 121 LRQFHQVGFEIIGPESPKADFEMIILVDTFLRRLGLTKYKIHLNSIGCPVCRKNYREALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D L          D   ++    ++  L + + D+                  
Sbjct: 181 EYYGQVLDNL--------CDDCKRRYETNILR--LLDCKVDHEYAL---------NAPKS 221

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           V +L         +L E +                                  T+VRGL+
Sbjct: 222 VDYLCDSCRAHYKKLKEYL-----------------------NTFEIEYVEDHTLVRGLD 258

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E           +      ++ GGGRYDGL +   G +VPA GF+ GI R+I+
Sbjct: 259 YYTRTVFEV--------RHEGLGAQNAIAGGGRYDGLFAELGGSSVPALGFAGGIERIIL 310

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK+       I      L+        +          LR  G+  ++ +   +    Q
Sbjct: 311 ALKAEGI---EIPMKNVHLVYIATLGEKAFMDGVQLAGELRKKGLSVDVDI-MDRKLSGQ 366

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           LK+A R     A+I G  E  +G++ ++DL  G ++  +      +   RV+
Sbjct: 367 LKHASRMGSRYAVIIGDEELEKGIVILRDLETGDQVEIDRDFAADYIAERVS 418


>gi|37678951|ref|NP_933560.1| histidyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|161501850|ref|NP_759422.2| histidyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|320157273|ref|YP_004189652.1| histidyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|31340443|sp|Q8DEZ9|SYH_VIBVU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|39932021|sp|Q7MNF0|SYH_VIBVY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|37197693|dbj|BAC93531.1| histidyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319932585|gb|ADV87449.1| histidyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319999067|gb|AAO08949.2| histidyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 422

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 109/477 (22%), Positives = 190/477 (39%), Gaps = 73/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +  ++  +++N+   YG++ +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTQSPLWQKLEGAVKNVISAYGYNEMRMPIVEMTHLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIENGLLYNQEQRVWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF QC V+  G +    DAE+ MM A     +G                   N
Sbjct: 117 PQKGRYRQFHQCGVEVFGLNGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YRTALIAFLEQHIDVLDE------------DCKRRMHTNPLRVLDTKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +  +L  +  +    L EL+            L                  
Sbjct: 216 QAILGDAPRLSDYLDPESTQHFAGLCELLDAAGIEYTVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E I         +     G+V GGGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWIT--------ESLGSQGTVCGGGRYDGLVEQLGGKATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE +         V +  +     ++       + +R A  G+R  
Sbjct: 305 FAMGLERLVLMLETLELTDVRRS----VDVYVVTAGEGTMMAGMKLAEQVREAIPGVRV- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           M      NF  Q K AD+    +A++ G  E +   + +KDLA G++++   +   S
Sbjct: 360 MNHFGGGNFKKQFKRADKVGAVVALVLGENEVADNTVVLKDLAGGEQVTYSQQEIAS 416


>gi|15678272|ref|NP_275387.1| histidyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621293|gb|AAB84750.1| histidyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 444

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 117/481 (24%), Positives = 208/481 (43%), Gaps = 60/481 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRG  D    E+R R  +   +R  +E YG+  I+TP+ E          +E   
Sbjct: 20  MDISRPRGTRDFLFAEMRNRKEVEGVLRRTFETYGYHEIKTPIFEELKLFTVKSGEE--V 77

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              ++   D  G+ ++LR +LTAP+AR           P + Y  G  FR E+   GRFR
Sbjct: 78  VNQIYHFTDKGGRELALRPELTAPVARLYMNEMQKKPKPIKMYYFGSCFRYERPQAGRFR 137

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   + +G  +  A+AE+  + +++L  +G+  + + + I +  IL GIL +  +  
Sbjct: 138 QFWQFGCELIGGRSPLAEAEVISLASESLHELGL--DGFEVHIGHLGILRGILGREEIPS 195

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS- 245
           + +        R +  +DK  ++ ++ LLGE              ++ E  ++++  +  
Sbjct: 196 ELQD-------RIMGVIDKGDVEELEALLGE------------VEVSGESRELLMKLIGT 236

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + + ++ E + G     +   E   + E +   G   +   ++  I RGL+YYTG 
Sbjct: 237 QGGPEVLDDVEEYLGGYSESLEALEEFRELVETLHYFGV--DDYHVNLGIARGLDYYTGI 294

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E  +                + GGG Y  LV  F G+ V +TGF+ G  RL+ AL   
Sbjct: 295 VFEIYVPE--------LGAQKQICGGGTY-NLVETFGGERVESTGFAFGFDRLMNAL--- 342

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                + + M  V +  +     ++ +    TQ LR AG+ A++ + S +     L +AD
Sbjct: 343 ---GMDEENMRMVDVFVIPIQDSTVPEAIRITQELRAAGVSADLEV-SGRKLRKALSHAD 398

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                 A++ G  E   G + +KD+                   R +Q T+P  E+V  +
Sbjct: 399 NLGARFAVLTGEREIQDGKVTVKDME------------------RNSQETLPRDEMVDKI 440

Query: 486 K 486
           K
Sbjct: 441 K 441


>gi|324991954|gb|EGC23877.1| histidine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324996153|gb|EGC28063.1| histidine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|332363514|gb|EGJ41295.1| histidine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 426

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 170/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKPSL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSAYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+    V +  +   ++         Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV-ELPIETALDVYVAVLGAGANGR--ALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADIFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQIQE 415


>gi|2501006|sp|P70076|SYHC_FUGRU RecName: Full=Histidyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|1524039|emb|CAA91012.1| histidyl-tRNA synthetase [Takifugu rubripes]
          Length = 519

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 121/500 (24%), Positives = 219/500 (43%), Gaps = 54/500 (10%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K +   +  +G  D   K++ IR ++ ++I + ++ +G + I+TP+ E  ++L     ++
Sbjct: 56  KHQFVLKTAKGTRDYNPKQMAIREKVFNTIVSCFKRHGAETIDTPVFELKETLTGKYGED 115

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 116 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPAMTRG 171

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G          C+ +   + +  +   D+ I +N+R+ILDG+    G
Sbjct: 172 RYREFYQCDFDIAGQYDAMIPDAECLKIVHEILS-ELDLGDFRIKVNDRRILDGMFAVCG 230

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +      N    +   +DKLDK   + VK            +      L+ E  D +  +
Sbjct: 231 VPD----NMFRTICSTVDKLDKLPWEAVK-----------NEMVNEKGLSEEAADQIGVY 275

Query: 244 LSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +     + E     + +  +     G  ++ ++   ++     ++++    ++ RGL+
Sbjct: 276 VGMQGGMDLAERLLQDQKMCQSTQACAGLTDIKLLFSYLQLF-QVTDKVVFDLSLARGLD 334

Query: 301 YYTGCVYEAILGF----------PVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPA 348
           YYTG +YEAIL                  ++ V  GSV GGGRYDGLV  F    + VP 
Sbjct: 335 YYTGIIYEAILTQAGVAPVAPETSNEAPTEECVTVGSVAGGGRYDGLVGMFDPKGRKVPC 394

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G SIGI R+   ++    ++        V +       + L +       L  AGI+AE
Sbjct: 395 VGVSIGIERIFSIMEQKAEASTEKIRTTEVQVMVAAAQKNLLEERLRLITELWNAGIKAE 454

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +    S    +QL++ +    PL  I G  E   G+++++++A   E+            
Sbjct: 455 LMYKKSPKLLSQLQHCEESGIPLVAILGEQELKNGVVKLRNVATRDEVD----------- 503

Query: 469 ARVAQITIPISELVSTVKKI 488
                  I  ++L++ +KK 
Sbjct: 504 -------ISRADLIAEIKKR 516


>gi|163783153|ref|ZP_02178147.1| histidyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881487|gb|EDP74997.1| histidyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 405

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 104/461 (22%), Positives = 187/461 (40%), Gaps = 67/461 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRGF D    E+    ++  ++R I   Y ++ I TP++EY+    + + +  D   
Sbjct: 5   FQAPRGFHDILGSELLKFRKVTTTVRAILRRYNYEEIITPVVEYAKVFERSIGEATDIVQ 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRFR 126
           K +F  +D  G+ ++LR + TA + R   EN    + P    +  GP+FR E+   GR+R
Sbjct: 65  KEMFVFEDRKGRLLALRPEGTAGVVRAYIENKLYALRPYHKLFYEGPMFRYERPQAGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKILDGILEKI 182
           QF Q   +  G +   ADAE+  +++D L  + I      N     +      + ++E +
Sbjct: 125 QFHQIGAEVFGVAEPHADAELLKLVSDILSELNIPATIELNSLGCKVCRPAYREALVEYL 184

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
              G++            D +D+     +++L  +          +   L   +   MV 
Sbjct: 185 HGVGEEL---------CKDCIDRKDRNPLRVLDCK---------VQSCQLAVREAPKMVD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  +  +    L   +                            + + +  +VRGL+YY
Sbjct: 227 FLCDECREHYTRLKTYLAEL-----------------------GVKYRENYNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  V+EA+                +V  GGRYD LV  F G   PA GF++G+ RL++ +
Sbjct: 264 TRTVFEAVSDELGA----------AVVAGGRYDYLVEEFGGPPTPALGFAVGVERLMLLI 313

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E             +  +    +  +        LR  G   E       N   QL+
Sbjct: 314 EEPEKD---------YELYFVIPFGNVHAYALKVADALRDRGKVVEFSYRKG-NLKKQLE 363

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +A+R     A+I G  E   G++ +KD+  G++   +++N 
Sbjct: 364 FANRLGADYAVIVGEDELREGVVSLKDMRTGEQKKLKVENI 404


>gi|307128383|ref|YP_003880414.1| histidyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306485445|gb|ADM92314.1| histidyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 429

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 102/461 (22%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E   G + +K+    +E+   ++  
Sbjct: 373 SADVFATKTLITLGESEVESGQVTVKNNQTREEVQVSLETI 413


>gi|332071196|gb|EGI81691.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 429

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 102/459 (22%), Positives = 181/459 (39%), Gaps = 52/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E  +M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +  +  + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHVDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD       I  G  E   G + +K+    +E+   ++
Sbjct: 373 SADVFVAKTLITLGESEVESGQVTVKNNQTREEVQVSLE 411


>gi|313123580|ref|YP_004033839.1| histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280143|gb|ADQ60862.1| Histidyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325684223|gb|EGD26399.1| histidine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 428

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 105/467 (22%), Positives = 185/467 (39%), Gaps = 57/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G  D   +      ++  + R++++   +  I TP  E  +   +   +  D 
Sbjct: 1   MRVQRPKGTVDILPETSGQWEKVEQTARDLFKRANYHEIRTPSFENYELFSRSSGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAEN---FDTIVFPCRTYRIGPVFRNEKHGP 122
             K ++  +D  G+ I+LR + TA + R   EN       V P   Y I  ++R E+   
Sbjct: 61  VEKEMYDFEDKGGRHIALRPEGTAGVVRAYVENKIYGPDYVKPFNVYYIAAMYRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS    AD E  ++  D L  +G+K  + HI        R+     
Sbjct: 121 GRQREFHQIGVESFGSDGYLADVETILLGHDLLAELGVKNYELHINTLGDSEVRQAYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   + G   +++L  +   D              +  
Sbjct: 181 LVDYFTPVKDQLSE--------DSQRRLGKNPLRILDSKAEEDQQF---------LPEAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +L  + +++ +++   +          ++L                       VRG
Sbjct: 224 KIRDYLDEESKENFNKILASLDKLGVKYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++  P +          +V GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVDDPTLWA-----SPSTVLGGGRYNHLVEEFSGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L         + E   +     +    +  K     + LR+ G  A+  +   K   
Sbjct: 316 MLVLSKQN---PEMFEDQGIDFFITNIGEGTDIKAVEVARQLRSLGFSAQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            Q + ADR      +  G  E + G L +K L+ G++ S E  + E 
Sbjct: 372 AQFRKADRVGARYVVTLGAKELAEGKLTVKRLSDGQQFSLEFTDLED 418


>gi|327270319|ref|XP_003219937.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 503

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 126/472 (26%), Positives = 212/472 (44%), Gaps = 26/472 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   K++ IR R+   I N ++ +G + I+TP+ E  ++L     ++
Sbjct: 48  KHKFVLKTPKGTRDYSPKQMAIRERVFSIIINCFKRHGAETIDTPVFELKETLTGKYGED 107

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 108 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPAMTRG 163

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G          C+ +   + +  ++  D+ I +N+R+ILDG+    G
Sbjct: 164 RYREFYQCDFDIAGQYDAMIPDAECLKIVHEILS-ALQIGDFRIKVNDRRILDGMFAVCG 222

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +   +DKLDK   + VK            +      L+ E  D +  +
Sbjct: 223 VPDS----KFRTICSTVDKLDKMSWEDVK-----------NEMVSEKGLSPEIADNIGGY 267

Query: 244 LSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +    S  E       +       +G  E+ ++ E +   G  S+++    ++ RGL+
Sbjct: 268 VKLHGGLSQIEQLLHDPKLMQNKQAMEGLGEMKLLFEYLALFGI-SDQVSFDLSLARGLD 326

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRL 358
           YYTG +YEA+L     +  ++ V  GSV GGGRYDGLV  F    + VP  G SIGI R+
Sbjct: 327 YYTGVIYEAVLLQQQNDHTEESVGVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERI 386

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++    ++          +         L +       L  +GI+AEM    +    
Sbjct: 387 FSIMEQKVEASEEKIRTTETQVLVASAQKKLLEERLKLVSELWDSGIKAEMLYKKNPKLL 446

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           NQL+Y +    PL  I G  E   G+++++D+A  +E+           + R
Sbjct: 447 NQLQYCEETGIPLVAILGEQELKDGVVKLRDVATREEVDICRGKLVEEIKRR 498


>gi|225859879|ref|YP_002741389.1| histidyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254782347|sp|C1CAV1|SYH_STRP7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|225721003|gb|ACO16857.1| histidyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 429

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 101/461 (21%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E  +M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E     + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESRQVTVKNNQTREEVQVSLETI 413


>gi|227510275|ref|ZP_03940324.1| histidyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189927|gb|EEI69994.1| histidyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 430

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 69/494 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G AD   +E R    + ++ R ++ +Y +  I TP+ E  D   +   D  D 
Sbjct: 1   MRYQRPKGTADILPEEARKWTYVEETARMLFNDYRYQEIRTPMFENFDVFSRTSGDTSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR---TYRIGPVFRNEKHGP 122
             K ++  +D   + ISLR + TA + R   EN        R    + +G +FR E+   
Sbjct: 61  VTKEMYDFKDKGDRHISLRPEGTAGVVRAFVENKLYGPEHQRPVKVFYMGSMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEK 181
           GR R+F Q  V+  GS     D E+  M  D L   G+K     I    +    D   + 
Sbjct: 121 GRQREFHQIGVEAFGSDEPELDVEVIAMGMDLLHHFGLKDIRLEINSLGDAASRDAYRQA 180

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +  + D   +E      + D   +     +++L  + + D             +    ++
Sbjct: 181 LIDYLDPHFDEL-----SKDSQVRLHKNPLRVLDSKDKQDQE---------IVKDAPSIL 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L+ D +K    + +L+                               I   +VRGL+Y
Sbjct: 227 DYLNDDSKKHFERVKKLLDTL-----------------------HIPYVIDPDMVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT  ++E ++    + E        ++  GGRY+GLV +  G  +P  GF +G+ RL++ 
Sbjct: 264 YTHTIFEIMVDSKALGEGYT-----TICAGGRYNGLVEQLGGPEMPGIGFGLGMERLMLL 318

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           + +          +  +    +     +  +     Q LR  G  A+     ++    Q 
Sbjct: 319 MDAQGV---KFPVLDQLDAYVVGIGEQTSIETLKIVQALRANGFAADRDY-LNRKPKAQF 374

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K AD+ N    I  G  E       +K +A GKE+                   +PI ++
Sbjct: 375 KSADKLNAQYTITIGESELESHTANVKSMASGKEI------------------NVPIDKI 416

Query: 482 VSTVKKILQENKEE 495
           ++   +I+  N  +
Sbjct: 417 INDFDEIITSNFND 430


>gi|260424642|ref|ZP_05732783.2| histidine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402663|gb|EEW96210.1| histidine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 423

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 100/469 (21%), Positives = 184/469 (39%), Gaps = 52/469 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D     I   N +   I+ +   YG+  I TP+ E +    + + D  D  
Sbjct: 4   ILQALRGTQDILPDNIYKWNHVESVIKELCALYGYSEIRTPMFEDTKLFLRGIGDTTDVV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRF 125
            K +++ +D  G+ I+LR + TA + R   E+           + IG +FR ++   GR+
Sbjct: 64  AKEMYTFEDRGGRSITLRPENTAAVVRSYLEHKLYGDQQVHKLFYIGSMFRYDRPQAGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGL 184
           R+F Q  V+ +G+S+  ADAE+  +     + +G+K  + HI  I + K      +K+  
Sbjct: 124 REFHQFGVEVLGASSPAADAEVINLAYTLFKTLGLKELELHINSIGDYKCRPIYRQKLIE 183

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             ++K ++        D   +     +++L  +  +             S     +  +L
Sbjct: 184 FFEEKEDQL-----CDDCQARLHKNPLRILDCKEDS---------CRRASAGAPKITDYL 229

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + EK    +   +                               + S +VRGL+YYT 
Sbjct: 230 CDECEKKFEAVKRYLAALE-----------------------IPYLVDSRLVRGLDYYTN 266

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E                  ++ GGGRYDGLV    G + P  GF++G+ RL++AL+ 
Sbjct: 267 TAFEIQYP--------PLGAQSAICGGGRYDGLVEDVGGPSTPGIGFAVGLERLLLALEM 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +             +  +    D++ +     Q LR  G+ AE+ L   ++   Q+K A
Sbjct: 319 QKLIPEPANRKK---VYIVTLGEDAVVEGIKIQQHLRDKGVIAEIDL-QDRSIKGQMKQA 374

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            + N    +I G  E  +    +K++  GK+          +      Q
Sbjct: 375 GKNNAEYTVIIGANEMEKKEAAVKNMENGKQQDIPFLKVSDFITGSSRQ 423


>gi|312143969|ref|YP_003995415.1| histidyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904620|gb|ADQ15061.1| histidyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 424

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 103/473 (21%), Positives = 192/473 (40%), Gaps = 52/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++   PRG  D    EI+    I D    ++ NY +  I TP+ EY++   + + +  D 
Sbjct: 1   MKFNAPRGTNDILPPEIKKWQYIEDLTHKLFTNYNYQEIRTPIFEYTELFQRGIGEVTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+LR + TA + R   EN       P + Y IGP+FR E+   GR
Sbjct: 61  VEKEMYTFEDKSGRSITLRPEGTASVIRSFLENKIYGQAQPTKYYYIGPMFRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKIG 183
           FRQF Q  V+ + S     DAE+  +    +E +G++  + H+     K      ++K+ 
Sbjct: 121 FRQFHQLGVEAIASDDPALDAEIISLGIRLMEELGLEDFELHLNSVGCKSCRPKYVKKLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               +   +     R     ++     +++L  + ++  S           +    +   
Sbjct: 181 SFLIENKEDLCDKCR-----ERIERNPLRVLDCKNQSCQS---------VIKGAPKITEH 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  + ++   E+   +                          +    I+  +VRGL+YYT
Sbjct: 227 LCPECDEHFSEVQSFLD-----------------------ILNIEYNINPLLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E         +        +V GGGRY+GL      +++P  GF++GI RL+++L 
Sbjct: 264 NTAFEI--------KDNALGAQNTVFGGGRYNGLAEEIGNRDIPGIGFALGIERLLLSLD 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +       + E   + +        +  +      +LR    + E+     ++ G+Q+K 
Sbjct: 316 AKGI---EVAEEAGIDLYITVIGKKAKREAFRLLDILRNEDFKTEIDY-LDRSVGSQMKS 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           ADR N    II G  E       I+++  G E   ++ N     +  V +  I
Sbjct: 372 ADRMNAEYTIIIGEDELENNSATIRNMKSGNEEEIKLSNLLEVMKQLVDKEEI 424


>gi|322420563|ref|YP_004199786.1| histidyl-tRNA synthetase [Geobacter sp. M18]
 gi|320126950|gb|ADW14510.1| histidyl-tRNA synthetase [Geobacter sp. M18]
          Length = 428

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 99/482 (20%), Positives = 186/482 (38%), Gaps = 56/482 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +     +GF D    E+     I  + R ++E YG   I  P+LE ++   + + D  D 
Sbjct: 1   MAITGVKGFNDILPGEVEKWQHIEATARRVFELYGLSEIRIPILEKTELFCRSIGDATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K ++S +D  G  +++R + TA + R   E+    +    R Y +GP+FR E+   GR
Sbjct: 61  VEKEMYSFEDKGGNKVTMRPEGTASVMRAYVEHKMHALDPVARLYYMGPMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q   +  G +A T DA++  M+    + +G+      I          +  +   
Sbjct: 121 YRQFHQIGAEITGVAAPTVDAQVLTMLTHFFQELGLTEPSLQINSLGCPCCRPVYREAL- 179

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
               K     I +   D   ++    ++ L  +           G    ++    M+ +L
Sbjct: 180 ---KKFLLDRIDMLCDDCKRRYDTNPLRALDCKS---------TGCQEATQGAPSMLDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +         + ++                              ++  +VRGL+YYT 
Sbjct: 228 CAECGDHFDRTRKHLE-----------------------LVGTPYTLNKRMVRGLDYYTR 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +                +V  GGRYDGL+S   G  +P  GF++G+ R+ + L  
Sbjct: 265 TTFEMVTTL--------LGAQSAVAAGGRYDGLISEIGGPQIPGIGFAMGVERVALLLAE 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            + S           +       ++ ++       L+  G   E+     K+  +Q++ A
Sbjct: 317 KDFSRRP-------DLFIAALGEEAHAEAFRLMSALQRLGFAVEIDY-EGKSLKSQMRRA 368

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           D+ N    +I G  E SRG   +K++  G +    +   ++   A    + +P  EL  T
Sbjct: 369 DKFNSRFTLIIGGDELSRGTAPLKNMDGGTQADVALG-ADAISSALKGVVKVPNPEL-ET 426

Query: 485 VK 486
           V+
Sbjct: 427 VR 428


>gi|194290005|ref|YP_002005912.1| histidyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|229558653|sp|B3R1K1|SYH_CUPTR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|193223840|emb|CAQ69849.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Cupriavidus taiwanensis LMG 19424]
          Length = 456

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 103/490 (21%), Positives = 190/490 (38%), Gaps = 80/490 (16%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  +G  D    +  +     ++ R +   YG+  I TP++E++    + + +  D   
Sbjct: 25  LQGVKGMNDMLPADAPLWEHFENAARAMLRAYGYQQIRTPIVEHTQLFVRGIGEVTDIVE 84

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++S  D  +G+ ++LR + TA   R   E+      P R +  GP+FR+E+   GR+R
Sbjct: 85  KEMYSFTDSLNGEQLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHERPQRGRYR 144

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           QF Q   + +G +    DAE+ +M     + +G                   +R+ L   
Sbjct: 145 QFHQLGAEALGFAGPDVDAEIILMCQRLWDDLGLTGVRLEINSLGQADERAAHREQLIKY 204

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           LE      DD            D   +     +++L  +                     
Sbjct: 205 LEGFQDILDD------------DSKRRLYTNPLRVLDTKNPALQDMAA---------NAP 243

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ FL  +       +  L+K                         +   KI+  +VRG
Sbjct: 244 KLIDFLGEESLAHFEGVQRLLKAN-----------------------NIPFKINPRLVRG 280

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E I          K    G++ GGGRYD L+++  G+  PA G+++GI R+
Sbjct: 281 LDYYNLTVFEWIT--------DKLGAQGTIAGGGRYDPLIAQMGGKPAPACGWAMGIERI 332

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF---LGSSK 415
           I  ++          +     +  +     +  +  +  + LR AG+   +     G   
Sbjct: 333 IELIREEGVVP----DAVGCDVYLVHQGEAAAQQAMVAAERLRDAGLDVVLHASPDGKGG 388

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +F +Q+K AD      A+I G  E + G++Q+K+L + ++            E    Q T
Sbjct: 389 SFKSQMKRADASGAAYAVIIGDDEVAAGVVQVKELRQREQ-----------AEGGGQQAT 437

Query: 476 IPISELVSTV 485
           +P   LV  +
Sbjct: 438 VPADGLVDYL 447


>gi|225714138|gb|ACO12915.1| Histidyl-tRNA synthetase, cytoplasmic [Lepeophtheirus salmonis]
          Length = 518

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 117/491 (23%), Positives = 209/491 (42%), Gaps = 45/491 (9%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           KL  +  +G  D    ++ +R ++L  +  +++ +G + I+TP+ E  D L     ++  
Sbjct: 66  KLILKTAKGTRDFQPAQMAVREKVLSKVIQVFKRHGAETIDTPVFERKDVLTGKYGED-- 123

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +K ++ L+D  G+ +SLRYDLT P ARYVA N    +   + Y+I  V+R +     R 
Sbjct: 124 -SKLIYDLKDQGGEILSLRYDLTVPFARYVAMNK---IMNIKRYQISKVYRRDNPSMARG 179

Query: 126 RQFIQCDVD-NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           R       D ++    +    ++  +         +   ++ I +N+R ILDGI E  G+
Sbjct: 180 RFREFYQCDLDIAGQYDPMVPDVECIKIMCEILEDLNIGNFVIKVNHRLILDGIFEVCGV 239

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                      +  ++DKLDK               +   +  +   L     D +  F+
Sbjct: 240 DPS----MFRTICSSVDKLDKSPW-----------EEVKKEMVEEKRLDEASADKIGEFV 284

Query: 245 SIDLEKSMHELYE--LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            +  +  + +  +   +  +    +G   + ++ +     G   NR     ++ RGL+YY
Sbjct: 285 RMSGKMELIDKLKETNLSQSKLAMEGLEHMKLLLKYAEIYGCL-NRTSFDLSLARGLDYY 343

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIV 360
           TG +YEA+L     +EK + +  GSV GGGRYD L  +   + ++VP  G SIGI RL  
Sbjct: 344 TGIIYEAVLIDQNTDEKGELIQVGSVAGGGRYDKLVGMFDPRKRDVPCVGMSIGIERLFS 403

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +++               +       + L +     Q L   GI+ E     +    NQ
Sbjct: 404 IMEANMLKEKTKIRTIETEVFVTSAQKNLLEERMKLCQELWKCGIKTEHSYKKNPKMLNQ 463

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           L+Y +    P A+I G  E   G ++++ ++  +E                    +P SE
Sbjct: 464 LQYCEENEIPFAVIIGESELQNGTVKLRRISNREET------------------EVPRSE 505

Query: 481 LVSTVKKILQE 491
           L   +KK L E
Sbjct: 506 LTDIIKKHLSE 516


>gi|254429026|ref|ZP_05042733.1| histidyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195195|gb|EDX90154.1| histidyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 424

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 111/506 (21%), Positives = 193/506 (38%), Gaps = 96/506 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    +    RG  D   ++  +   +   +  +  +YG+  I  P++E +D   + +
Sbjct: 1   MSK----KITSIRGMNDILPEQTGLWQWLEAKVGAVLASYGYQEIRMPIVEQTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   ++        R +  GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFDDRNGDSLTLRPEGTASCVRACEQHGLLYNQTQRLWYTGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G S    DAE+ ++ A   +A+G             D      
Sbjct: 117 PQAGRYRQFHQIGVETFGMSGPDIDAEVILLTARLWKALGLADKVTLELNSLGDSADRAR 176

Query: 171 NRKILDGILEKIG--LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
            R  L   L+     L GD +       LR +D  D    + +K                
Sbjct: 177 YRDALVDYLKIHVDALDGDSQKRLERSPLRVLDSKDPGTREVLKD--------------- 221

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
                      +  +L+ +       L  L+  +                          
Sbjct: 222 --------APQLADYLNDEAVAHFEGLKALLDASGIA----------------------- 250

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
            K++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA
Sbjct: 251 YKVNPYLVRGLDYYGKTVFEWVT--------DALGAQGTVCAGGRYDGLVEQLGGKPTPA 302

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIR 406
            GF++G+ RLI+ ++  +      +   PV +  M    D L+     ++ LR A  G R
Sbjct: 303 VGFAMGVERLILLIEQEK-----PELSAPVDVYVMAMG-DVLASTMALSEQLRDALPG-R 355

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A        +F +Q+K ADR    +A+I G  E +   + +K L                
Sbjct: 356 AIQLHCGGGSFKSQMKKADRSGAAVALIIGEDELASNSVMVKPLR--------------- 400

Query: 467 REARVAQITIPISELVSTVKKILQEN 492
              +  Q  +   ++ S +  +L +N
Sbjct: 401 --GQAEQQQVSRDQVASELVALLADN 424


>gi|257059086|ref|YP_003136974.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256589252|gb|ACV00139.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 429

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 103/472 (21%), Positives = 190/472 (40%), Gaps = 60/472 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +   G  D   +EI     +      I     +  I  P+ E +    + + +  D  
Sbjct: 3   TIQTLPGTRDILPEEIGYWQYVETITTEILSRAMYQEIRAPIFEQTSLFERGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRF 125
            K +++ +D   + ++LR + TA + R   +N         R +  GP+FR E+   GR 
Sbjct: 63  GKEMYTFKDRGDRSVTLRPEGTAGVVRAYLQNNLYATGGVQRLWYQGPMFRYERPQAGRQ 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEK 181
           RQF Q  ++ +GS    AD E+  +  D L+ +G++     +      N+R+     L  
Sbjct: 123 RQFHQIGLELLGSGDPRADVEVIALATDILKKLGLQSLKLDLNSVGDRNDRQRYREALVN 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             L   ++L+         D  D+     +++L  + +              ++    ++
Sbjct: 183 YFLPYKNELD--------PDSQDRLERNPLRILDSKNQRTKE---------INQNAPSIL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L    +K   ++ +L+                          +   +++  +VRGL+Y
Sbjct: 226 QYLGDQSKKHFDQVQQLLTDL-----------------------NISYQLNPCLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E         +        +V GGGRYDGLV+   G + PA G++IG+ RLI+ 
Sbjct: 263 YTHTAFEI--------QSDDLGAQATVCGGGRYDGLVAELGGPDTPAVGWAIGMERLIIL 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           LK  ++  + + +     I  +     + ++  +  Q LR  G+  E+ L S   FG Q 
Sbjct: 315 LKQRQTVPHCVPD-----IYIVSKGEQAEAQALILAQKLRFEGLTVELDL-SGSAFGKQF 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K ADR      I+ G  E +   LQ+K LA  ++ + +     S      AQ
Sbjct: 369 KRADRSGAIACIVLGDEEAATQTLQLKWLATKQQETLDQTQLVSEIGELKAQ 420


>gi|121593583|ref|YP_985479.1| histidyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|189082284|sp|A1W578|SYH_ACISJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|120605663|gb|ABM41403.1| histidyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 429

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 92/467 (19%), Positives = 184/467 (39%), Gaps = 56/467 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    +      + D +R +   Y +  I TP++E +    + L +  D  
Sbjct: 3   KLVAIKGMNDILPPDSARWEWLEDKVRTLMARYAYRNIRTPIVEPTPLFVRGLGEVTDIV 62

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S +D  +G+ ++LR + TA + R V E+        R Y +GP+FR+E+   GR+
Sbjct: 63  EKEMYSFEDRLNGEQLTLRPEATAGVVRAVVEHSMLYDGGKRLYYMGPMFRHERPQRGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +G     ADAE+ ++       +G++     +    +           + 
Sbjct: 123 RQFHQIGAEALGFPGAEADAEIILLAHALWAELGLENVRLELNSLGQPDERRAHRAALIA 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             ++  + L      D   +     +++L  +     +           E    ++ FL 
Sbjct: 183 YLEQHMDVLD----EDARRRLHSNPLRILDTKNPAMQA---------LVEGAPRLIDFLG 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               +    +  ++                               ++  +VRG++YY   
Sbjct: 230 EASLQHFETVKAILDANGVV-----------------------WSLNPRLVRGMDYYNLT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G++ GGGRYD L+ +  G++ PA G+++G+ R++  LK  
Sbjct: 267 VFEFVT--------DQLGSQGTICGGGRYDYLIEQIGGKSAPAVGWALGVERVLELLKEQ 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS-----KNFGNQ 420
           E+           ++     D+ +L       Q LR  G+  +M   ++      +  +Q
Sbjct: 319 EAQVARPAADAYAVV----PDASALPVVMATLQRLRAQGVSVQMHSSTAAGEGMGSMKSQ 374

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
            K AD      A++ G  E +RG + +K L   G++  R +     W
Sbjct: 375 FKKADASGARYALVFGADELARGAVTVKPLRDSGEQAERPLAALAEW 421


>gi|107103322|ref|ZP_01367240.1| hypothetical protein PaerPA_01004391 [Pseudomonas aeruginosa PACS2]
          Length = 419

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 100/473 (21%), Positives = 189/473 (39%), Gaps = 69/473 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++      +  +   + + YG+  I  P+LE+++   + + +  D  +K +++ 
Sbjct: 1   MNDILPEQTPAWRYLERTFAGLLDGYGYSEIRLPILEFTELFARGIGEGTDVVDKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D +G+ +++R + TA   R V E+  +      + +  GP+FR EK   GR+RQF Q  
Sbjct: 61  LDRNGESLTMRPEGTAGCVRAVLEHGLSGGGQVQKLWYTGPMFRYEKPQKGRYRQFHQIG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGI---------KRNDYHIGINNRKILDGILEKIG 183
           V+         DAE+ ++     + +G+                    R+ L   L++  
Sbjct: 121 VEVFNLPGPDIDAELIILTWRLWQKLGMADAVTLQLNTLGSSEARARYREALVAYLQERF 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              D+            D   +     +++L  +   +++     GA    + +D     
Sbjct: 181 EQLDE------------DSQRRMTTNPLRILDSK--VESTQALLVGAPTLHDYLD----- 221

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                                 E+       +   +   G    R +I+  +VRGL+YY 
Sbjct: 222 ----------------------EESIAHFEGLKARLDAVGL---RYEINQKLVRGLDYYC 256

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +          K    G+V GGGRYDGLVS+F G+  P  GF++G+ RL++ L+
Sbjct: 257 RTAFEWVT--------DKLGAQGTVCGGGRYDGLVSQFGGKPTPGVGFAMGVERLVLLLE 308

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQL 421
           +L      +     + +      ++         + LR+A  GIR  +  G+  +F +Q 
Sbjct: 309 TLGVIPAELNRPADLYVCAFGEPAEL--AALTLAEQLRSAIPGIRLLVNAGAG-SFKSQF 365

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREARVAQ 473
           K AD+     A+I G  E +  ++  K L   G++ S           A +AQ
Sbjct: 366 KKADKSGARFALILGEDEVANRVVGFKPLRDEGEQQSIAWDALPEHLAACLAQ 418


>gi|300812622|ref|ZP_07093035.1| histidine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496403|gb|EFK31512.1| histidine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 428

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 186/467 (39%), Gaps = 57/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G  D   +      ++  + R++++   +  I TP  E  +   +   +  D 
Sbjct: 1   MRVQRPKGTVDILPETSGQWEKVEQTARDLFKRANYHEIRTPSFENYELFSRSSGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAEN---FDTIVFPCRTYRIGPVFRNEKHGP 122
             K ++  +D  G+ I+LR + TA + R   EN       V P   Y I  ++R E+   
Sbjct: 61  VEKEMYDFEDKGGRHIALRPEGTAGVVRAYVENKIYGPDYVKPFNVYYIAAMYRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS+   +D E  ++  D L  +G+K  + HI        R+     
Sbjct: 121 GRQREFHQIGVESFGSNGYLSDVETILLGHDLLAELGVKNYELHINTLGDSEVRQAYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   + G   +++L  +   D              +  
Sbjct: 181 LVDYFTPVKDQLSE--------DSQRRLGKNPLRILDSKAEEDQQF---------LPEAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +L  + +++ +++   +          ++L                       VRG
Sbjct: 224 KIRDYLDEESKENFNKILASLDKLGVKYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++  P +          +V GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVDDPTLWA-----SPSTVLGGGRYNHLVEEFSGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L         + E   +     +    +  K     + LR+ G  A+  +   K   
Sbjct: 316 MLVLSKQN---PEMFEDQGIDFFITNIGEGTDIKAVEVARQLRSLGFSAQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            Q + ADR      +  G  E + G L +K L+ G++ S E  + E 
Sbjct: 372 AQFRKADRVGARYVVTLGAKELAEGKLTVKRLSDGQQFSLEFTDLED 418


>gi|325105989|ref|YP_004275643.1| histidyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974837|gb|ADY53821.1| histidyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 459

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 147/482 (30%), Positives = 233/482 (48%), Gaps = 57/482 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR 65
           ++A +P+G  D    E + RN I ++I++++  YG+  I+TP +E  D+L GK+  + D 
Sbjct: 4   IKASVPKGTRDFGPIETQKRNYIYNTIKSVFRKYGYQEIQTPTMENLDTLTGKYGEEGD- 62

Query: 66  PNKGVFSLQDDDG------------------------QWISLRYDLTAPLARYVAENFDT 101
             K +F + +                              +LRYDLT P AR+V  + + 
Sbjct: 63  --KLIFKILNSGDFYEKASAKKTAEGDFSSKSILPLISEKALRYDLTVPFARFVVMHQNE 120

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
           I FP + ++I PV+R ++   GR+R+F QCDVD VGS +   +AE   +  + L  +G+K
Sbjct: 121 ITFPFKRFQIQPVWRADRPQKGRYREFYQCDVDVVGSDSLLNEAEFICIYDEALSKLGLK 180

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
             D+ I INNRKIL GI E IG        + + +  AIDKLDK GL GV+  L      
Sbjct: 181 --DFSIKINNRKILTGIAELIGKPN-----QIVDMTVAIDKLDKIGLDGVEKELLSKG-- 231

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
                  GA+L   +I   V  L+    + + +L  ++K ++ G KG  E+  +   +  
Sbjct: 232 -----FTGADL---EILKPVILLNGSNNEKLAQLKMVLKDSLNGLKGIEEIETVFSYLAG 283

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
               + ++++  T+ RGL YYTGC++E          K   V  GS+GGGGRYD L   F
Sbjct: 284 FDIKTAKVELDLTLARGLNYYTGCIFEV---------KTNEVAMGSIGGGGRYDDLTGMF 334

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
             +N+   G S G  R+   L+ L       +E   VLI     + +           LR
Sbjct: 335 GLKNLTGAGVSFGADRIYDVLEELNLFPKTAEESTKVLICVFGKEEE--QYAIPLLAKLR 392

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +  I AE++   +K    Q++YA+ ++ P  I+ G+ E   G L  KD+  G++    I 
Sbjct: 393 SVAINAELYPFGAK-LKKQMQYANDKHIPYTIVIGSDEMQSGKLTFKDMNSGEQKQATID 451

Query: 462 NN 463
             
Sbjct: 452 EI 453


>gi|260780861|ref|XP_002585554.1| hypothetical protein BRAFLDRAFT_274629 [Branchiostoma floridae]
 gi|229270558|gb|EEN41565.1| hypothetical protein BRAFLDRAFT_274629 [Branchiostoma floridae]
          Length = 515

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 119/480 (24%), Positives = 207/480 (43%), Gaps = 30/480 (6%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            +  K + + P+G  D   +++ IR  +  +I N ++ +G + I+TP+ E  ++L     
Sbjct: 55  ARPQKFQLKTPKGTRDYNPRQMAIREGVFKTIINCFKRHGAETIDTPVFELKETLTGKYG 114

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           ++    K ++ L D  G+ +SLRYDLT P ARY+A N    +             N    
Sbjct: 115 EDA---KLIYDLADQGGEILSLRYDLTVPFARYLAMNKINTIKRYHIA-KVYRRDNPAMT 170

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G          C+ +   + +  +   D+ I +N R +LDG+   
Sbjct: 171 RGRYREFYQCDFDIAGQYDLMIPDAECVKIVAEILS-ELNVGDFIIKLNTRLLLDGMFAV 229

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  D    +   +  A+DKLDK   + V+            +      L  E  D + 
Sbjct: 230 CGVPED----KFRTICSAVDKLDKTFWEDVR-----------SEMVDEKGLAPEVADRIG 274

Query: 242 SFLSIDLEKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ ++ +  +       E +       +G  E+ ++    +  G   +++    ++ RG
Sbjct: 275 EYVRLNGQLELVDQLMQDEQMMKNKMARQGLEEMKLLLTYCQLFGVL-DKVSFDLSLARG 333

Query: 299 LEYYTGCVYEAILG----FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ--NVPATGFS 352
           L+YYTG +YEAIL          +K +PV  GSV GGGRYDGLV  F  +   VP  G S
Sbjct: 334 LDYYTGVIYEAILTTEKVQSDGGDKNEPVGVGSVAGGGRYDGLVGMFDPKGKKVPCVGVS 393

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IGI RL   +++   +           +       + L +      +L   GI+ E+   
Sbjct: 394 IGIERLFSIMEAKAEAAEGKVRTTETQVYVASGQKNMLEERMKLCNLLWEGGIKTELSYK 453

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +    NQ +YA+    P   I G  E   G++++++ +  +E +            RV 
Sbjct: 454 KNPKLLNQFQYAEEHGIPFLAIIGEQELKDGVVKVRNTSTREEETFPRDKLLEEIRTRVG 513


>gi|262283662|ref|ZP_06061427.1| histidyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260719|gb|EEY79420.1| histidyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 426

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 100/472 (21%), Positives = 178/472 (37%), Gaps = 52/472 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + +  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEEFARETFRKYNYAEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKEIGITNVSLELNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D          +  E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDK---------VAVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSAYFEAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+      I  +   ++   K     Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV-ELPIEMGLDAYIAVLGAGAN--GKALELVQSLRAQGFAAERDY-LDRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            AD       I  G  E   G L +K+    +E++  ++  ++  +A +AQI
Sbjct: 373 SADIFQAKTIITLGESELESGELTVKNNVTRQEVTVALEAIKTDFQAVLAQI 424


>gi|148984420|ref|ZP_01817708.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923197|gb|EDK74311.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800869|emb|CBW33526.1| histidyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 429

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 101/461 (21%), Positives = 179/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E  +M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIVMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVSQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E     + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESRQVTVKNNQTREEVQVSLETI 413


>gi|119471074|ref|ZP_01613633.1| histidine tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119445914|gb|EAW27195.1| histidine tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 426

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 106/482 (21%), Positives = 196/482 (40%), Gaps = 73/482 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   + +I  ++ + +R    ++G+  I  P++E +D   + +
Sbjct: 1   MAKQ----IQAVRGMNDCLPGDTQIWQKVENILRETVASFGYQEIRFPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFADRNGDLLTLRPEGTAVCVRAGNQNGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  ++  G +    DAE+ ++ A   +A GI                  +
Sbjct: 117 PQKGRYRQFHQFGLETFGIATADIDAEVILLTAQLWKAFGISEHVRLELNSLGSNEARAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +    +       A
Sbjct: 177 YRDALVAYLEQHTDVLDE------------DSKRRMYSNPLRVLDSK--NPDVQAILVDA 222

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
              SE +D                            +       + E +  +G       
Sbjct: 223 PKLSEHLDA---------------------------ESKEHFENLCERLDAAG---VSYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 253 VNEKLVRGLDYYNRTVFEWVT--------DSLGAQGTVCAGGRYDGLVEQLGGKATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAE 408
           F++G+ RL++ L++LE             +        +  +  +    LR   AG+R  
Sbjct: 305 FAMGLERLVLLLQALE---CVGDIRRNADVYLAAMGDKASIQAPIIASELRRDVAGLRV- 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWR 467
           M      NF  QLK AD+ +  +A+I G  E  +G++ IK L +  ++++ +++  ++  
Sbjct: 361 MVHAGGGNFKKQLKRADKSDALVAVIIGEDELEQGVVTIKYLRERKEQVTLKLEQAKALL 420

Query: 468 EA 469
             
Sbjct: 421 AE 422


>gi|167823868|ref|ZP_02455339.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226197114|ref|ZP_03792691.1| histidine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254198372|ref|ZP_04904794.1| histidyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169655113|gb|EDS87806.1| histidyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|225930493|gb|EEH26503.1| histidine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 446

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/499 (20%), Positives = 199/499 (39%), Gaps = 66/499 (13%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + +
Sbjct: 5   KRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ ++LR + TA + R   E+      P R + +GP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFVDALNGESLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         G+ E
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSL------GLAE 178

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +   H  + +      +  +D   +  L    L + + +     +  + A         +
Sbjct: 179 ERAAHRVELIKYLEQHVDKLDDDAQRRLYTNPLRVLDTKNPALQEIVRNA-------PQL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL          L  L+K                              I+  +VRGL+
Sbjct: 232 IDFLGDVSRAHFDGLQRLLKANNL-----------------------PFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++G+ R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNF 417
            LK          E   V +  +     +  +  +  + LR  G+   +     G+  +F
Sbjct: 321 LLKEEHLVP----EQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQITI 476
            +Q+K AD      A+I G  E + G + +K L   G E  + +            Q ++
Sbjct: 377 KSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRGTGAEGEKNV------------QQSV 424

Query: 477 PISELVSTVKKILQENKEE 495
           P+  L   +   +    E+
Sbjct: 425 PVESLTEFLINAMVATAED 443


>gi|332198542|gb|EGJ12625.1| histidyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 429

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 101/461 (21%), Positives = 178/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPAIDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQTHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E     + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESRQVTVKNNQTREEVQVSLETI 413


>gi|328945234|gb|EGG39388.1| histidine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 426

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 170/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKPSL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSTYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+    V +  +   ++         Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV-ELPIETALDVYVAVLGTGANGR--ALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADIFKAKTLITLGESEVESGQVTVKNNYNREEITVSLDQIQE 415


>gi|158333833|ref|YP_001515005.1| histidyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082282|sp|B0CDA0|SYH_ACAM1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|158304074|gb|ABW25691.1| histidyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 430

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 110/479 (22%), Positives = 195/479 (40%), Gaps = 62/479 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++ RG  D    E+     +  + R +     +  + TP+ E ++   + + +  D   
Sbjct: 4   IQVSRGTRDILPDEVIYWQYVEATARQLLHQAAYRELRTPIFEQTNLFERGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ QD   + I+LR + TA   R   EN         R + IGP+FR E+ G GR R
Sbjct: 64  KEMYTFQDRGDRSITLRPEGTAGAVRSFIENKLHAQGGVQRLWYIGPMFRYERPGAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-----NNRKILDGILEK 181
           QF Q  V+ +GS    ADAE+  + +  L+++G+      +       + +K  + ++  
Sbjct: 124 QFHQIGVEALGSQDPRADAEVIAIASQLLKSLGVPDWTLSLNSLGTAEDRQKYREALVTY 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +  + DD            D  D+     +++L  +                ++    ++
Sbjct: 184 LSQYKDDLD---------PDSQDRLQRNPLRILDSKDPKTKE---------IAQSAPNIL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  D ++    + +L+                              K++  +VRGL+Y
Sbjct: 226 DYLGTDSKQHFDRVQQLLTDLDIA-----------------------YKLNPCLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E  L               +V GGGRYD LVS   G   PA G++IG+ RLI+ 
Sbjct: 263 YTHTAFEFELEG--------LGNQATVCGGGRYDRLVSELGGPETPAVGWAIGMERLILL 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L++ E + N   +   V         ++ ++  +  Q LR  G   EM L S   FG QL
Sbjct: 315 LQNAEITLNQSLDFYCV-----ARGPEAEAQALLICQNLRENGFSVEMDL-SGSAFGKQL 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           K A+R      +I G  E     +Q+K LA G++ S    +  +      +++T     
Sbjct: 369 KRANRSGALACLILGDTEACDRTVQLKWLASGEQESIAQADLRNLTSQLQSKLTAAKGN 427


>gi|126440200|ref|YP_001059224.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166227952|sp|A3NA53|SYH_BURP6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|126219693|gb|ABN83199.1| histidine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 446

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/499 (20%), Positives = 199/499 (39%), Gaps = 66/499 (13%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + +
Sbjct: 5   KRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ ++LR + TA + R   E+      P R + +GP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         G+ E
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSL------GLAE 178

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +   H  + +      +  +D   +  L    L + + +     +  + A         +
Sbjct: 179 ERAAHRVELIKYLEQHVDKLDDDAQRRLYTNPLRVLDTKNPALQEIVRNA-------PQL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL          L  L+K                              I+  +VRGL+
Sbjct: 232 IDFLGDVSRAHFDGLQRLLKANNL-----------------------PFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++G+ R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNF 417
            LK          E   V +  +     +  +  +  + LR  G+   +     G+  +F
Sbjct: 321 LLKEEHLVP----EQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQITI 476
            +Q+K AD      A+I G  E + G + +K L   G E  + +            Q ++
Sbjct: 377 KSQMKRADASGAAFAVILGEDEVANGTVSVKPLRGTGAEGEKNV------------QQSV 424

Query: 477 PISELVSTVKKILQENKEE 495
           P+  L   +   +    E+
Sbjct: 425 PVESLTEFLINAMVATAED 443


>gi|218130251|ref|ZP_03459055.1| hypothetical protein BACEGG_01839 [Bacteroides eggerthii DSM 20697]
 gi|317477608|ref|ZP_07936826.1| histidyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217987535|gb|EEC53863.1| hypothetical protein BACEGG_01839 [Bacteroides eggerthii DSM 20697]
 gi|316906213|gb|EFV27949.1| histidyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 458

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 150/486 (30%), Positives = 216/486 (44%), Gaps = 61/486 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 9   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 66

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 67  -KLLFKIQNSGDYFSGLTDEELLSRNAAKLAGKFCEKGLRYDLTVPFARYVVMHRDEITF 125

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 126 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 182

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E       
Sbjct: 183 VCIKINNRKILSGIAEIIGESDK-----IVDITVAIDKLDKIGLDNVNAELKEK------ 231

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     L+   E+ +  L +++  +  G KG  E   I   +   
Sbjct: 232 ------GISDEAIAKLQPIILLNGSNEEKLATLKQVLSASETGLKGVEESGFILNTLSTL 285

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 286 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 335

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S        +R 
Sbjct: 336 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTQLLFINFGEKEAAFS--MNVLAGVRA 393

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  SSK    Q+ YA+ +  P   + G  E + G + +K++  G++     + 
Sbjct: 394 AGIRAEIFPDSSK-MKKQMSYANSKMIPFVALVGENEMNEGKVTLKNMETGEQKLVTPQE 452

Query: 463 NESWRE 468
             S   
Sbjct: 453 LVSELS 458


>gi|160886575|ref|ZP_02067578.1| hypothetical protein BACOVA_04586 [Bacteroides ovatus ATCC 8483]
 gi|260173328|ref|ZP_05759740.1| histidyl-tRNA synthetase [Bacteroides sp. D2]
 gi|293373217|ref|ZP_06619579.1| histidine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|315921601|ref|ZP_07917841.1| histidyl-tRNA synthetase [Bacteroides sp. D2]
 gi|156108460|gb|EDO10205.1| hypothetical protein BACOVA_04586 [Bacteroides ovatus ATCC 8483]
 gi|292631865|gb|EFF50481.1| histidine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|313695476|gb|EFS32311.1| histidyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 454

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 152/505 (30%), Positives = 218/505 (43%), Gaps = 79/505 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++        I    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSRFNI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILSGIAEIIGESDK-----IVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++  +  G KG  E   I   +   
Sbjct: 227 ------GISDEAIAKLQPIILLSGTNAEKLATLKNVLSASEVGLKGVEESEFILNTLETM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S        +R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTELLFINFGEKEAAFS--MGILSKVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  ++K    Q+ YA+ +N P   I G  E + G   +K++  G++       
Sbjct: 389 AGIRAEIFPDAAK-MKKQMSYANTKNIPFVAIVGENEMNEGKAMLKNMETGEQN------ 441

Query: 463 NESWREARVAQITIPISELVSTVKK 487
                        +   EL++ VKK
Sbjct: 442 ------------LVSAEELIAVVKK 454


>gi|148270774|ref|YP_001245234.1| histidyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166228627|sp|A5IN85|SYH_THEP1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|147736318|gb|ABQ47658.1| histidyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 420

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 113/468 (24%), Positives = 193/468 (41%), Gaps = 52/468 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  +G  D   +EI     + ++ RN+ E+ G + I TP+ E ++   + + +E D 
Sbjct: 1   MNYKRIKGTNDIFGEEIWYWRYVEETFRNVCESAGIEEIRTPIFEQTELFVRSVGEESDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ QD  G+ I+LR + TAP+ R   EN      F  R Y IGP+FR EK   GR
Sbjct: 61  VQKEMYTFQDKAGRSITLRPEGTAPVVRAFLENSLIDRGFQQRYYYIGPMFRYEKPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q   + +GS +  AD E+ M++   L  +G+ +   H+            +    
Sbjct: 121 LRQFHQVGFEIIGSESPKADFEVIMLVDTFLRKLGLTKYRIHLNSIGCSACR---KNYRE 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +   + L  L   D   ++    ++  L + + D+                  V +L
Sbjct: 178 ALKEYYGQILANL-CDDCKRRYETNILR--LLDCKVDHEYAL---------NAPKSVDYL 225

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
               +    +L E +                                  T+VRGL+YYT 
Sbjct: 226 CDSCKTHYEKLKEYL-----------------------NTFEIEYVEDHTLVRGLDYYTR 262

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E           +      ++ GGGRYDGL     G +VPA GF+ GI R+I+ALK+
Sbjct: 263 TVFEV--------RHEGLGAQNTIAGGGRYDGLFVELGGSSVPALGFAGGIERIILALKA 314

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E     I      L+  +     + +        LR  G+  ++ +   +    QLK+A
Sbjct: 315 EEI---EIPIKNVHLVYVVTLGEKAFADGVQLAVELRKKGLSVDVDI-MDRKLSGQLKHA 370

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            R     A+I G  E  +G++ ++DL  G ++  +      +   RV+
Sbjct: 371 HRMGSRYAVIIGDEELEKGIVILRDLETGDQVEVDRDFAVDYIAERVS 418


>gi|14521875|ref|NP_127351.1| histidyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|13878794|sp|Q9UY31|SYH_PYRAB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|5459095|emb|CAB50581.1| hisS histidyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 431

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 128/466 (27%), Positives = 217/466 (46%), Gaps = 37/466 (7%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  +G  D   +E+  R  + + IR ++E YGF  + TP++EY+        +E    K
Sbjct: 2   IERVKGTRDFLPEEMVKRRWVFEKIREVFETYGFKEVLTPVMEYTKLFQLRSGEE--VVK 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++ +D  G+ ++LR D+T+ +AR    +F T   P + Y I  +FR E+   GR+R+F
Sbjct: 60  QLYAFKDKGGRDVALRPDMTSSVARLYVNSFQTAPKPIKWYYIANMFRYEEPQSGRYREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +GS    ADAE+  +  D+  + G+K  D+ + I +R +LD   + +G+  D 
Sbjct: 120 WQAGVELIGSDKIEADAEVIALFVDSYLSTGLK--DFTVNIGDRVLLDEFAKMLGVKDD- 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                + ++R IDK DK   +     LGE              L    I+ +++ + I  
Sbjct: 177 -----IGLMRIIDKKDKLSQEEFLKALGEF------------GLDENGIEKVLNLIEIKG 219

Query: 249 E-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           +   +  L E +  +   ++  + L  + +++         I+I   I RG +YYT  V+
Sbjct: 220 KPDDVLPLAEELFTSERAKEEISRLYNLVDILS-WYEVDEWIQIDLGIARGFDYYTSIVF 278

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           EAI+   +                 RYD L+  F G+  PATGF+IGI RLI  L+    
Sbjct: 279 EAIVPNDLGIGSIGGGG--------RYDNLIEVFGGKPTPATGFAIGIERLIPILEWKGL 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +K    V +  +    DS          LR AGIR+++ L S +     L YA+R 
Sbjct: 331 LP-ELKAGPDVFVIPVG---DSRDVATAIVTRLRKAGIRSDIEL-SGRKLRKALDYANRI 385

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              L+II G  +  RG++ I+DL  G ++   + N  +     + Q
Sbjct: 386 GVRLSIIVGKRDLERGVVTIRDLESGNQVEVPVDNVVTKVRELLNQ 431


>gi|114046806|ref|YP_737356.1| histidyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123326713|sp|Q0HX56|SYH_SHESR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|113888248|gb|ABI42299.1| histidyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 425

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/478 (21%), Positives = 190/478 (39%), Gaps = 65/478 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R     YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKVEAVLRASVAAYGYSEIRTPIVENTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G  +   DAE+ M+ A   E +GI  +     +       R  
Sbjct: 117 PQKGRYRQFHQFGVEVYGIGSADIDAEVLMLSARLWEKLGISEHVTLELNTLGDPAERAA 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +     S           
Sbjct: 177 YREALIAFLEQHKDKLDE--------DSQRRMYSNPLRVLDSKDPQVQS---------IL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L  +  +   +L EL+                            + +++  
Sbjct: 220 GDAPALMDYLGQESSQHFAQLRELLDA-----------------------VGIQYRVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV++  G++ PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTNS--------LGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R+++    LE+          V +         L +     Q LR+    +R  M   
Sbjct: 309 LERIVL---LLETLELTQDIPAAVDVYVAAMGDSCLVEAIKVAQELRSTLPTLRV-MSHC 364

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREA 469
              NF  Q+K AD+    +A++ G  E + G++ +K L    ++         ++   
Sbjct: 365 GGGNFKKQIKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQQRVARNALSAFLAE 422


>gi|299067267|emb|CBJ38464.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) [Ralstonia
           solanacearum CMR15]
          Length = 440

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 105/510 (20%), Positives = 193/510 (37%), Gaps = 86/510 (16%)

Query: 1   MGKKTKLRAEL---PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M    K R +     +G  D    +  +     +++R++   YG+  I TP++E +    
Sbjct: 1   MSDTQKQRVQKIAGVKGMNDLLPGDAPLWEHFDNAVRSMLRAYGYQQIRTPIVEQTQLFV 60

Query: 58  KFLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
           + + +  D   K ++S  D  +G+ +++R + TA   R V E+      P R +  GP+F
Sbjct: 61  RGIGEVTDIVEKEMYSFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMF 120

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHI 167
           R+E+   GR+RQF Q  V+ +G +    DAE+ +M     + +G                
Sbjct: 121 RHERPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEE 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              +R  L   LE      D+            D   +     +++L  +          
Sbjct: 181 RAAHRADLIKYLEGFQDILDE------------DSKRRLYTNPLRVLDTKNPALQEMAAG 228

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                       ++ +L  +  +    +  L+K                         + 
Sbjct: 229 ---------APKLIDYLGDESRRHFEGVQALLKAN-----------------------NI 256

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
              I+  +VRGL+YY   V+E            K    G+V GGGRYD L+ +  G+  P
Sbjct: 257 PYMINPRLVRGLDYYNLTVFEWTT--------DKLGAQGTVAGGGRYDPLIEQIGGKPAP 308

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           A G+++G+ R+I  L+    +           +  +     +  +  +  + LR AG+  
Sbjct: 309 ACGWAMGVERIIELLREENLAPEPQ----GCDVYIVHQGDQAQVQALVAAERLRDAGLDV 364

Query: 408 EMFL---GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            +     G + +F +Q K AD      A+I G  E + G+ Q+K L              
Sbjct: 365 ILHCSPEGRNGSFKSQFKRADASGASYAVIIGDDEVAAGVAQLKPLR------------- 411

Query: 465 SWREARVAQITIPISELVSTVKKILQENKE 494
               +  AQ T+P  +LV  +   +  N +
Sbjct: 412 -GDPSADAQQTVPADQLVDRLIDAMVANSD 440


>gi|7676162|sp|O26346|SYH_METTH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
          Length = 425

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 117/481 (24%), Positives = 208/481 (43%), Gaps = 60/481 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRG  D    E+R R  +   +R  +E YG+  I+TP+ E          +E   
Sbjct: 1   MDISRPRGTRDFLFAEMRNRKEVEGVLRRTFETYGYHEIKTPIFEELKLFTVKSGEE--V 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              ++   D  G+ ++LR +LTAP+AR           P + Y  G  FR E+   GRFR
Sbjct: 59  VNQIYHFTDKGGRELALRPELTAPVARLYMNEMQKKPKPIKMYYFGSCFRYERPQAGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   + +G  +  A+AE+  + +++L  +G+  + + + I +  IL GIL +  +  
Sbjct: 119 QFWQFGCELIGGRSPLAEAEVISLASESLHELGL--DGFEVHIGHLGILRGILGREEIPS 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS- 245
           + +        R +  +DK  ++ ++ LLGE              ++ E  ++++  +  
Sbjct: 177 ELQD-------RIMGVIDKGDVEELEALLGE------------VEVSGESRELLMKLIGT 217

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + + ++ E + G     +   E   + E +   G   +   ++  I RGL+YYTG 
Sbjct: 218 QGGPEVLDDVEEYLGGYSESLEALEEFRELVETLHYFGV--DDYHVNLGIARGLDYYTGI 275

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E  +                + GGG Y  LV  F G+ V +TGF+ G  RL+ AL   
Sbjct: 276 VFEIYVPE--------LGAQKQICGGGTY-NLVETFGGERVESTGFAFGFDRLMNAL--- 323

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                + + M  V +  +     ++ +    TQ LR AG+ A++ + S +     L +AD
Sbjct: 324 ---GMDEENMRMVDVFVIPIQDSTVPEAIRITQELRAAGVSADLEV-SGRKLRKALSHAD 379

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                 A++ G  E   G + +KD+                   R +Q T+P  E+V  +
Sbjct: 380 NLGARFAVLTGEREIQDGKVTVKDME------------------RNSQETLPRDEMVDKI 421

Query: 486 K 486
           K
Sbjct: 422 K 422


>gi|171778546|ref|ZP_02919673.1| hypothetical protein STRINF_00525 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282769|gb|EDT48193.1| hypothetical protein STRINF_00525 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 425

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/463 (22%), Positives = 173/463 (37%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      I    R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPSESAKWQYIEAVARETFKKYNYSEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSFVENKLFAPEVQKPVKMYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E   M     + +GIK    H+               
Sbjct: 121 GRLREFHQVGVECFGSANPATDVETIAMAYQLFQTLGIKDVTLHLNTLGSAASRA---AY 177

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D L      L A D   +     +++L  + + D          +  E    ++ 
Sbjct: 178 RQALIDYLTPMRDKLSA-DSQRRLDENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + E+++                         +    I + +VRGL+YY
Sbjct: 228 YLDEESQAHFDAVREMLETL-----------------------NIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I                ++  GGRYD LV  F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFITTVDKSE--------LTICAGGRYDSLVEYFDGPETPGFGFGLGLERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                     KEM    I  +   ++   K     Q +R  G  AE      +    Q K
Sbjct: 317 DKQGIELPVEKEMD-AYIAVLGQGANI--KALELVQAIRNQGFSAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD  N    I  G  E   G + +K+    +E+S    + E+
Sbjct: 373 SADAFNAKTVITLGESEIEAGQVTVKNNKTREEVSVSFADIET 415


>gi|322390642|ref|ZP_08064156.1| histidine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142615|gb|EFX38079.1| histidine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 430

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 103/477 (21%), Positives = 182/477 (38%), Gaps = 60/477 (12%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-E 63
             ++ + P+G  D    +      +    R ++  Y +D I TP+ E+ + + + + D  
Sbjct: 2   KAMKLQKPKGTQDILPGDSAKWQYVEGFARKVFARYNYDEIRTPIFEHYEVISRSVGDTT 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKH 120
           D   K ++   D   + I+LR + TAP+ R   EN           + Y IGP+FR E+ 
Sbjct: 62  DIVTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYIGPMFRYERP 121

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILD 176
             GR RQF Q  V+  GSS    D E   M A  L+ +GI     H+       +R+   
Sbjct: 122 QAGRLRQFHQIGVECFGSSNPATDVETIAMAAQFLKELGIDNVTLHLNTLGSPASRQAYR 181

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L    L   D+L++        D   +     +++L  + + D +           EQ
Sbjct: 182 QALIDYLLPMKDQLSK--------DSQRRLEENPLRVLDSKEKEDKA---------AVEQ 224

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ +L  + +     +  +++                              I + +V
Sbjct: 225 APSILDYLDEESQAHFDAVRRMLEDLGVA-----------------------YVIDTNMV 261

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   ++E I         +      +V  GGRYDGLV  F G      GF IG+ 
Sbjct: 262 RGLDYYNHTIFEFIT--------EIEGNELTVCAGGRYDGLVEYFGGPATAGFGFGIGVE 313

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+++ L+        +     +         +         Q LR  G +AE      + 
Sbjct: 314 RILLVLEKKGI---ELPIETGLDAYIAVLGDEVNEAALSLVQALRIQGFKAERDY-LGRK 369

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              Q K AD       I  G+ E   G + +K+    +E++  ++N +    + +A+
Sbjct: 370 LKAQFKSADVFAAKALITLGSSEVESGQVTVKNNQTRQEVTVALENLKKGFPSVLAE 426


>gi|117919679|ref|YP_868871.1| histidyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166228616|sp|A0KUJ6|SYH_SHESA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|117612011|gb|ABK47465.1| histidyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 425

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/478 (21%), Positives = 190/478 (39%), Gaps = 65/478 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R     YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKVEAVLRASVAAYGYSEIRTPIVENTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G  +   DAE+ M+ A   E +GI  +     +       R  
Sbjct: 117 PQKGRYRQFHQFGVEVYGIGSADIDAEVLMLSARLWEKLGISEHVTLELNTLGDPAERAA 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +     S           
Sbjct: 177 YREALIAFLEQHKDKLDE--------DSQRRMYSNPLRVLDSKDPQVQS---------IL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L  +  +   +L EL+                            + +++  
Sbjct: 220 ADAPALMDYLGEESSQHFAQLRELLDA-----------------------VGIQYRVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV++  G++ PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTNS--------LGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R+++    LE+          V +         L +     Q LR+    +R  M   
Sbjct: 309 LERIVL---LLETLELTQDIPAAVDVYVAAMGDSCLVEAIKVAQELRSTLPTLRV-MSHC 364

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREA 469
              NF  Q+K AD+    +A++ G  E + G++ +K L    ++         ++   
Sbjct: 365 GGGNFKKQIKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQQRVARNALSAFLAE 422


>gi|78211740|ref|YP_380519.1| histidyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|78196199|gb|ABB33964.1| histidyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 445

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 96/457 (21%), Positives = 178/457 (38%), Gaps = 53/457 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   + ++    +    R  ++  GF  I TPLLE +D   + + +  D  
Sbjct: 18  QLQSLRGMVDLLPEVLQRWQAVEAKAREHFQRSGFGEIRTPLLETTDLFCRGIGEGTDVV 77

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S QD   +  +LR + TA + R   ++        + +  GP+FR E+   GR R
Sbjct: 78  GKEMYSFQDRGDRSCTLRPEGTASVVRAALQHGLLSQGAQKLWYAGPMFRYERPQAGRQR 137

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLH 185
           QF Q  V+ +G+    +D E+  +  D L ++G+      +      +        +   
Sbjct: 138 QFHQIGVEWLGAERARSDVEVIALAWDLLASLGVGGLQLELNSLGTAEDRKAYRNALVAW 197

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + +           D   +     +++L  + +   +           E    +V  LS
Sbjct: 198 LEQRSEVLD-----PDSQARLSTNPLRILDSKNKNTQA---------LLEDAPTLVDALS 243

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               +   E+   +                               ++  +VRGL+YY+  
Sbjct: 244 DASRERFEEVQRGLTSL-----------------------GIHFLLNPRLVRGLDYYSHT 280

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E            +     +V GGGRYDGL+ +  G   PA G+++G+ RL++ L++ 
Sbjct: 281 AFEIT--------SDQLGAQATVCGGGRYDGLIGQLGGPQTPAIGWALGMERLLLVLEAA 332

Query: 366 ESSTNNIK-----EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
             +                +  ++   ++        + LR AG+R E+  GS   FG Q
Sbjct: 333 AKADPQGDAARLTAAAAPDVFLVNRGDEAECVALALARDLRAAGLRVELD-GSGSAFGKQ 391

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            K ADR     A++ G  E  RG +++K L +  E S
Sbjct: 392 FKRADRSGASWAMVLGDEEVERGEVRLKRLQQQAEES 428


>gi|289193081|ref|YP_003459022.1| histidyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939531|gb|ADC70286.1| histidyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 413

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 115/458 (25%), Positives = 203/458 (44%), Gaps = 48/458 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D   +E++ R  I + +R ++E YG+  I TP  E  + + K   +E R  K
Sbjct: 2   FQKPRGTRDFLPEEMKKRRFIENKLREVFERYGYKEILTPTFETFELIAKKTGEEIR--K 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ ++LR ++T+P+ R+       +  P R Y     FR E+   GRFR+F
Sbjct: 60  QLYVFKDHGGREMALRPEMTSPVVRFYLNELKNLQKPLRLYYFANCFRYERPQAGRFREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G     ADAE+  +  D L  +G+   D+ + I +  +L G+LE+  +  ++
Sbjct: 120 WQMGCELIGCKEPLADAEVLNLAMDGLINIGL---DFDVHIGHLGVLKGVLEEFNVSEEE 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID- 247
           ++                    ++ L+ +   +N   +     L  E+ +++   L    
Sbjct: 177 EV-------------------KIRRLIDKEDYENLEVYLNEI-LGEEKKELIFDILKFKG 216

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + EL E++K      +    L  I E V       ++  I+  I RGL+YYTG V+
Sbjct: 217 GREILDELKEILKDFPKSIEAIKNLEKILEFV-----IHDKYTINLGIARGLDYYTGMVF 271

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                   + GGGRYD L+  F G+  PA GF+ G  R+++ +  L+ 
Sbjct: 272 EIYGKKGAKQ----------ICGGGRYDNLIETFGGEPTPAVGFAYGFDRIMMNIDDLDI 321

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                 E   +LI  +  D + + K  +    LR AG   E+ +   +     L YA+ R
Sbjct: 322 ------EEEGILIIPVKKDKELIKKSLIIADKLRKAGKIVELEI-MGRKLRKALDYANSR 374

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
                II G  E + G + +KD+  G++    I    +
Sbjct: 375 GFKKVIIVGEKELNEGKVTLKDMITGEQKLISIDELVN 412


>gi|168179549|ref|ZP_02614213.1| histidyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182669807|gb|EDT81783.1| histidyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 415

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 101/468 (21%), Positives = 191/468 (40%), Gaps = 62/468 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + +  RNI  ++G   I TP+ EY++   + + +  D 
Sbjct: 1   MSLQAPKGTKDLLPTESYKWQYLENKFRNIAADFGCREIRTPVFEYTELFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + T+P  R   E        P + Y   PV R E    GR
Sbjct: 61  VQKEMYTFEDKAGRSITLKPEGTSPAVRAFVEGRLFNETQPTKMYYFTPVMRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQ  Q  ++  G+   + DAE+  +     + +G++      +       RK  +  L+
Sbjct: 121 LRQHHQFGIEIFGAKDASVDAEVISIPVRIYKELGVEGVELNINSIGCPKCRKTYNEALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K      DKL              +F    +++L  + + D   +  K A +       +
Sbjct: 181 KYLSKNYDKL--------CSTCKTRFDKNPLRIL--DCKVDTCKEIVKDAPI-------I 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++  + ++    L   +                          +   KI   IVRGL+
Sbjct: 224 LDYICGECKEHFESLKNYLD-----------------------VLNINYKIDPFIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+  V+E I+               ++  GGRYD L+    G ++PA GF +G+ RL++
Sbjct: 261 YYSKTVFEFIIDD------------ITICAGGRYDYLIEEIGGPSMPAVGFGMGMERLLL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+     T  I E   V +   +    +  +     + LR   I+ E+     K+   Q
Sbjct: 309 TLQEK---TIEIPEEAYVDLYLGNMGDKAKLEVLKLAKELRDRHIKCEIDH-MGKSVKAQ 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +KYA++     +++ G  E + G   IK +  G+++S  IK+ ++  +
Sbjct: 365 MKYANKIGAKYSMVLGEEELNTGKATIKRMEDGEQISVNIKDIDTLIK 412


>gi|241662756|ref|YP_002981116.1| histidyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240864783|gb|ACS62444.1| histidyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 450

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 108/510 (21%), Positives = 196/510 (38%), Gaps = 86/510 (16%)

Query: 1   MGKKTKLRAEL---PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M    K R +     +G  D    +  +     +++R++   YG+  I TP++E +    
Sbjct: 11  MSDTQKQRVQKIAGVKGMNDLLPADAPLWEHFDNAVRSMLRAYGYQQIRTPIVEQTQLFV 70

Query: 58  KFLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
           + + +  D   K +++  D  +G+ +++R + TA   R V E+      P R +  GP+F
Sbjct: 71  RGIGEVTDIVEKEMYTFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMF 130

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHI 167
           R+E+   GR+RQF Q  V+ +G +    DAE+ +M     + +G                
Sbjct: 131 RHERPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQADE 190

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              +R  L   LE      D+            D   +     +++L  +          
Sbjct: 191 RAAHRADLIKYLEGFQDILDE------------DGKRRLYSNPLRVLDTKNPALQDMAAG 238

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                       ++ +L  +       + +L+K                         + 
Sbjct: 239 ---------APKLIDYLGDESRAHFEGVQKLLKAN-----------------------NI 266

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
              I+  +VRGL+YY   V+E            K    G+V GGGRYD L+ +  G+  P
Sbjct: 267 PFTINPRLVRGLDYYNLTVFEWTT--------DKLGAQGTVAGGGRYDPLIEQIGGKPAP 318

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           A G+++G+ R+I  L+  +       E     +  +    ++  +  +  + LR AG+  
Sbjct: 319 ACGWAMGVERIIELLREEKLEP----EAQGCDVYIVHQGDEAQVQALIAAERLRDAGLDV 374

Query: 408 EMFL---GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            +     G + +F +Q K AD      A+I G  E ++G+ QIK L              
Sbjct: 375 ILHASPEGRNGSFKSQFKRADASGASYAVIIGDDEVTQGVAQIKPLR------------- 421

Query: 465 SWREARVAQITIPISELVSTVKKILQENKE 494
               A  AQ T+P  +LV  +   L  N +
Sbjct: 422 -GDPAADAQQTVPSDQLVDRLIDALVANND 450


>gi|315634912|ref|ZP_07890194.1| histidine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476464|gb|EFU67214.1| histidine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 425

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 189/493 (38%), Gaps = 71/493 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   + + +R++   YG+  I  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTETPLWQWVENKVRSVLSAYGYAEIRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +F+  D D + ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMFTFDDRDEESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+  + A   + +GI  +   + +N+   L+   
Sbjct: 117 PQKGRYRQFHQVGVEIFGIPNPEIDAELIALTARLWKDLGIF-DHVTLQLNSIGSLEA-R 174

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +       D L   + +L   D   +     +++L  + +                    
Sbjct: 175 KNYRQALVDFLQNHIDILD-EDSKRRLTTNPLRILDSKDQRVQE---------VLNDAPK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +L  D  +   +L  L+       +   +L                       VRGL
Sbjct: 225 LHDYLDDDSREHFAQLCALLDNLGIQYEINQKL-----------------------VRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 262 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATSGVGFAMGLERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ + +          V I  +     +        + LR+    +R  +   S  NF
Sbjct: 314 LLVQEVNTQITLPSA---VDIYIVYQGEGTTVAAFNLAEKLRSELPHLRT-LLHCSGGNF 369

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q K AD+    LA++ G  E     + +K+L +  E                 Q  + 
Sbjct: 370 KKQFKRADKSGAKLALVIGEDEVKNQQVVVKNLLQHSE-----------------QAVVA 412

Query: 478 ISELVSTVKKILQ 490
           + ++++ ++   +
Sbjct: 413 LGDIINHIQNTFK 425


>gi|209526080|ref|ZP_03274612.1| histidyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209493468|gb|EDZ93791.1| histidyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 441

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 106/471 (22%), Positives = 184/471 (39%), Gaps = 60/471 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D   +E+     +            +  I TP+ E +    + + +  D   
Sbjct: 20  IQSLRGTRDILPEEVGYWQWVASVAEETLARGNYQEIRTPIFEPTALFERGIGEATDVVG 79

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + I+LR + TA + R   E          R + +GP+FR E+   GR R
Sbjct: 80  KEMYTFCDRGDRSITLRPEGTAGVVRAYIERKLFANPGVQRLWYMGPMFRYERPQAGRQR 139

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEKI 182
           QF Q  V+ +GS    AD E+  +  D L+++G+     ++       +R+     L   
Sbjct: 140 QFHQLGVEVLGSDDPRADVEVIAVAVDILKSLGVTNLHLNLNSVGDRTDRQNYRQALVDY 199

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D+L++        D  D+     +++L  +   + + + T+ A         ++ 
Sbjct: 200 LTPFQDELDQ--------DSRDRLTRNPMRILDSKD--ERTQEITRDA-------PSILD 242

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L    +     +  L+K                              ++  +VRGL+YY
Sbjct: 243 YLGERSQSHFERVQYLIKEL-----------------------GISYTLNPRLVRGLDYY 279

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E I                +V GGGRYDGLV    G  VPA G++IG+ RLI+ L
Sbjct: 280 THTAFEII--------SDDLGAQATVCGGGRYDGLVQELGGPEVPAVGWAIGLERLIILL 331

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L        E     +  +     + +   +  Q LR AG+R E+ L S   FG Q K
Sbjct: 332 QQLHQPPQVTPE-----LYLVSRGEKAEANSLILAQKLRQAGLRVELDL-SGSAFGKQFK 385

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ADR      ++ G  E   G + +K L  G++      +  +  +    Q
Sbjct: 386 RADRSGAVACLVLGDAEAIAGTVNLKWLKSGEQTVFNQVDLIAKADQIKQQ 436


>gi|320539277|ref|ZP_08038947.1| histidyl tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030669|gb|EFW12678.1| histidyl tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 424

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 105/477 (22%), Positives = 187/477 (39%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   K+  +  RI  +++ + + YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPKDTALWQRIEGTLKKVLDGYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ ++ A   +A+G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLHGPDIDAELILLTARWWKALGIAEHVKLELNSIGSLEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L G LE+     D+            D   +     +++L  +            A
Sbjct: 177 YRNALVGFLEQHVDVLDE------------DCKRRMYRNPLRVLDSK--NPEVQALLNDA 222

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
              SE +D                           E        + EL+ ++G       
Sbjct: 223 PRLSEYLD---------------------------EASCAHFTGLCELLAQAGIP---YT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V  GGRYD LV +  G+ VPA G
Sbjct: 253 INECLVRGLDYYNRTVFEWVTTS--------LGAQGTVCAGGRYDSLVEQLGGRAVPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ +++L     +      + +  +   + + S      + +R A   ++  
Sbjct: 305 FAMGLERLVLLVQALN---PDFTAPPTIDVYLISSGAGAQSAAMQLAERVRDALPQLKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              G   NF  Q+  AD+    +A+I G  E +   + +KDL  G++ +       +
Sbjct: 362 TNYGGG-NFKKQITRADKWGACVALILGENEVAAQQVVVKDLRSGEQETLAQSETAA 417


>gi|255690243|ref|ZP_05413918.1| histidine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624263|gb|EEX47134.1| histidine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 453

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 146/486 (30%), Positives = 212/486 (43%), Gaps = 61/486 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPAMEMLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++        I    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSRFNI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILSGIAEIIGESDK-----IVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++  +  G KG  E   I   +   
Sbjct: 227 ------GISDEAIAKLQPIILLSGTNAEKLATLKNVLAASEVGLKGVEESEFILNTLETM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  L+           +L         + S        +R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLDLYPKEAVNGTELLFINFGEKEAAFS--MGILSKVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  ++K    Q+ YA+ +N P   I G  E + G   +K++  G++     + 
Sbjct: 389 AGIRAEIFPDTAK-MKKQMSYANAKNIPFVAIVGENEMNEGKAMLKNMETGEQNLVSAEE 447

Query: 463 NESWRE 468
             +   
Sbjct: 448 LIAAIR 453


>gi|289423161|ref|ZP_06424976.1| histidine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156492|gb|EFD05142.1| histidine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 420

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 103/465 (22%), Positives = 175/465 (37%), Gaps = 49/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++   PRG  D  +KE    N +    R I   YG++ I TP+ E ++   + + D  D 
Sbjct: 1   MKISAPRGTKDITSKESFKWNYLETKFRQICSMYGYEEIRTPIFENTELFQRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K ++S +D   + ++L+ + TA + R   EN       P + + I P FR E+   GR
Sbjct: 61  VQKEMYSFKDRGDRDLTLKPEGTAGVIRAFIENKMFADAQPTKLFYITPCFRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q  V+ VGS   + DAE   +    L  +G+K     I      +      K+  
Sbjct: 121 QRQFHQFGVEAVGSDTPSLDAEAISLAMQFLGELGLKDLSVSINSVGCPVCRESYNKLLK 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +K ++ L        L     +   + + + +     D  K        I +M   L
Sbjct: 181 EYLEKKSDVLC------DLCNERREKNPMRVIDCKVQTCQDNIKD-------IPLMADHL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +    +L   +                          + +  +   IVRGL+YY  
Sbjct: 228 CEDCQDHFEKLKSYLDE-----------------------MNIKYHVDKKIVRGLDYYKR 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E I                +V GGGRYDGLV +  G              +   L +
Sbjct: 265 TAFEIISND--------LGAQSTVCGGGRYDGLVEQIGGPE--GYSGVGFGMGVERLLLT 314

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           LE++   I+      I  +     +  K     + LR   I A+      ++F  Q KY+
Sbjct: 315 LEANNIEIENPNKTDIYIVTLGEMAKLKSFGILKNLRDNHISADKDH-LDRSFKAQFKYS 373

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           ++ N    I+ G  E  +    +K++  G++ S +I N     + 
Sbjct: 374 NKINAKYTIVIGDEELEKDEATLKNMETGEQKSVKISNLVEEFKG 418


>gi|326794515|ref|YP_004312335.1| Histidyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326545279|gb|ADZ90499.1| Histidyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 423

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 102/470 (21%), Positives = 195/470 (41%), Gaps = 59/470 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    +  +   I +++ N+ ++YG+  I  P++E+++   + + +  D  
Sbjct: 4   KVQAIRGMNDILPGQSSVWQYIENAVANVVKSYGYHQIRFPVVEHTELFKRGVGETTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G+ ++LR + TA   R   +         R + +GP+FR E+   GR+R
Sbjct: 64  EKEMYTFDDRNGESLTLRPEGTASCVRAADQAGLLFNQVQRLWYVGPMFRYERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q  V++ G +    DAE+ ++ A   + +G+  +     +       R+     L  
Sbjct: 124 QFHQIGVESFGMATPDIDAELIILTARLWKQLGLLEHVELQLNTIGVAEARENFKASLVD 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        D   +     +++L  + +               E    + 
Sbjct: 184 YLTEYKDELDE--------DSQRRLTTNPLRILDSKDQKTQK---------ILEGAPSLD 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            ++  + ++    L  ++K                              I+  +VRGL+Y
Sbjct: 227 QYIDQESQEQFERLQAILKAN-----------------------DVSYVINRKLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +                +V  GGRYDGLV +  G+  PA GF++GI RL++ 
Sbjct: 264 YGKTVFEWVTT--------HLGAQATVCAGGRYDGLVEQLGGKATPAVGFAMGIERLVLL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGN 419
           L++LE   +  K    V + +M  D++  S      + +R A   +      G   NF N
Sbjct: 316 LETLELIPDAAKASTDVFVVSMGADAELTS--FSLAESIREALPNLTVLRHCGGG-NFKN 372

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           Q+K AD+      +I G  E +    QIKD+  G++ S  +     +  +
Sbjct: 373 QMKKADKSGARFTLILGDNEVANNECQIKDMTTGQQESCALDKVSEYLSS 422


>gi|319763712|ref|YP_004127649.1| histidyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317118273|gb|ADV00762.1| histidyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 429

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 95/473 (20%), Positives = 187/473 (39%), Gaps = 56/473 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    E      + D++R +   Y +  I TP++E +    + L +  D  
Sbjct: 3   KLVAIKGMNDILPPESARWEWLEDTVRTLMARYAYRNIRTPIVEPTPLFVRGLGEVTDIV 62

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S +D  +G+ ++LR + TA + R V E+        R Y +GP+FR+E+   GR+
Sbjct: 63  EKEMYSFEDRLNGEQLTLRPEATAGVVRAVVEHSMLYDGGKRLYYMGPMFRHERPQRGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +G     ADAE+ ++       +G+K     +    +           + 
Sbjct: 123 RQFHQIGAEALGFPGAEADAEIILLAHALWAELGLKDVRLELNSLGQPDERRAHRAALIA 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             ++  + L      D   +     +++L  +     +           E    ++ FL 
Sbjct: 183 HLEQHQDALD----EDARRRLHSNPLRILDTKNPAMQA---------VVEAAPRLIDFLG 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               K    +  ++                               ++  +VRG++YY   
Sbjct: 230 EASLKHFETVKAILDANGVA-----------------------WSLNPRLVRGMDYYNLT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G++ GGGRYD L+ +  G+  PA G+++G+ R++  +K  
Sbjct: 267 VFEFVT--------DQLGSQGTICGGGRYDYLIEQIGGKPAPAVGWALGVERVLELIKEQ 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS-----KNFGNQ 420
           E+           ++     D+ +L       Q LR  G+  +M   ++      +  +Q
Sbjct: 319 EAQAPRPVADAYAIV----PDASALPVVMAALQRLRALGVSVQMHSPTAAGEGMGSMKSQ 374

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREARVA 472
            K AD      A++ G  E +RG + IK L   G+++ R +     W  +  +
Sbjct: 375 FKKADASGSRFALVFGADEMARGAVTIKPLRDGGEQVERPLATLADWAASLQS 427


>gi|251791827|ref|YP_003006547.1| histidyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247533214|gb|ACS96460.1| histidyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 425

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 102/473 (21%), Positives = 185/473 (39%), Gaps = 55/473 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +  +   +   +R++   YG+  I  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTDTPLWQWVESKVRSVLSAYGYAEIRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +F+  D D + ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMFTFDDRDEESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+  + A   + +GI  +   + +N+   LD   
Sbjct: 117 PQKGRYRQFHQVGVEIFGIPNPEIDAELIALTARLWKDLGIF-DHVTLQLNSIGSLDA-R 174

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +       D L   + +L   D   +     +++L  + +                    
Sbjct: 175 KNYRQALVDFLQNHIDILD-EDSKRRLTTNPLRILDSKDQRVQE---------VLNDAPK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +L  +  +   +L  L+       +   +L                       VRGL
Sbjct: 225 LHDYLDDESREHFAQLCTLLDSLGIQYEINQKL-----------------------VRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 262 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATSGVGFAMGLERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +       +    V +  +    D+        + LR+    +R  M   S  NF
Sbjct: 314 LLVQEVNPHIELPRA---VDLYVVYQGEDTTIAAFNLAEKLRSELPHLRT-MLHCSGGNF 369

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKD-LAKGKELSREIKNNESWREA 469
             Q K AD+    LA++ G  E     + +KD L +G++ +    +  S  + 
Sbjct: 370 KKQFKRADKTGAKLALVIGEEEVKNQQVVVKDLLQQGEQTAVAFADITSHIKN 422


>gi|113969573|ref|YP_733366.1| histidyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130603|sp|Q0HKV8|SYH_SHESM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|113884257|gb|ABI38309.1| histidyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 425

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/478 (21%), Positives = 190/478 (39%), Gaps = 65/478 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D    +  +  ++   +R     YG+  I TP++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDILPTQSPLWQKVEAVLRASVAAYGYSEIRTPIVENTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G  +   DAE+ M+ A   E +GI  +     +       R  
Sbjct: 117 PQKGRYRQFHQFGVEVYGIGSADIDAEVLMLSARLWEKLGISEHVTLELNTLGDPAERAA 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        DKL+E        D   +     +++L  +     S           
Sbjct: 177 YREALIAFLEQHKDKLDE--------DSQRRMYSNPLRVLDSKDPQVQS---------IL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L  +  +   +L EL+                            + +++  
Sbjct: 220 GDAPALMDYLGEESSQHFAQLRELLDA-----------------------VGIQYRVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV++  G++ PA GF++G
Sbjct: 257 LVRGLDYYNRTVFEWVTNS--------LGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + R+++    LE+          V +         L +     Q LR+    +R  M   
Sbjct: 309 LERIVL---LLETLELTQDIPAAVDVYVAAMGDSCLVEAIKVAQELRSTLPTLRV-MSHC 364

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREA 469
              NF  Q+K AD+    +A++ G  E + G++ +K L    ++         ++   
Sbjct: 365 GGGNFKKQIKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQQRVARNALSAFLAE 422


>gi|330824025|ref|YP_004387328.1| histidyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329309397|gb|AEB83812.1| Histidyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 429

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 96/474 (20%), Positives = 186/474 (39%), Gaps = 58/474 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    E      + D++R +   Y +  I TP++E +    + L +  D  
Sbjct: 3   KLVAIKGMNDILPPESARWEWLEDTVRTLMARYAYRNIRTPIVEPTPLFVRGLGEVTDIV 62

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S +D  +G+ ++LR + TA + R V E+        R Y +GP+FR+E+   GR+
Sbjct: 63  EKEMYSFEDRLNGEQLTLRPEATAGVVRAVVEHSMLYDGGKRLYYMGPMFRHERPQRGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGL 184
           RQF Q   + +G     ADAE+ ++       +G+K     +               +  
Sbjct: 123 RQFHQIGAEALGFPGAEADAEIILLAHALWAELGLKDVRLELNSLGQPDERRAHRAALIA 182

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +   +E        D   +     +++L  +     +           E    ++ FL
Sbjct: 183 HLEQHQDELD-----EDARRRLHSNPLRILDTKNPAMQA---------VVEAAPRLIDFL 228

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                K    +  ++                               ++  +VRG++YY  
Sbjct: 229 GEASLKHFETVKAILDANGVA-----------------------WSLNPRLVRGMDYYNL 265

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +          +    G++ GGGRYD L+ +  G+  PA G+++G+ R++  +K 
Sbjct: 266 TVFEFVT--------DQLGSQGTICGGGRYDYLIEQIGGKPAPAVGWALGVERVLELIKE 317

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS-----KNFGN 419
            E+           ++     D+ +L       Q LR  G+  +M   ++      +  +
Sbjct: 318 QEAQAPRPVADAYAIV----PDASALPVVMAALQRLRALGVSVQMHSPTAAGEGMGSMKS 373

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREARVA 472
           Q K AD      A++ G  E +RG + IK L   G+++ R +     W  +  +
Sbjct: 374 QFKKADASGSRFALVFGADEMARGAVTIKPLRDGGEQVERPLATLADWAASLQS 427


>gi|17545935|ref|NP_519337.1| histidyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|32130128|sp|Q8Y029|SYH_RALSO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|17428230|emb|CAD14918.1| probable histidyl-trna synthetase (histidine--trna ligase)(hisrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 432

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/500 (20%), Positives = 191/500 (38%), Gaps = 83/500 (16%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    +  +     +++R++   YG+  I TP++E +    + + +  D  
Sbjct: 3   KIAGVKGMNDLLPGDAPLWEHFDNAVRSMLRAYGYQQIRTPIVEQTQLFVRGIGEVTDIV 62

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G+ +++R + TA   R V E+      P R +  GP+FR+EK   GR+
Sbjct: 63  EKEMYSFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHEKPQRGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDG 177
           RQF Q  V+ +G +    DAE+ +M     + +G                   +R  L  
Sbjct: 123 RQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAAHRADLIK 182

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE      D+            D   +     +++L  +                    
Sbjct: 183 YLEGFQDILDE------------DSKRRLYTNPLRVLDTKNPALQEMAAG---------A 221

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ +L  +       + +L+K                         +    I+  +VR
Sbjct: 222 PKLIDYLGEESCAHFEGVQKLLKAN-----------------------NIPFTINPRLVR 258

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E            K    G+V GGGRYD L+ +  G+  PA G+++G+ R
Sbjct: 259 GLDYYNLTVFEWTT--------DKLGAQGTVAGGGRYDPLIEQIGGKPAPACGWAMGVER 310

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSS 414
           +I  L+    +           +  +    ++  +  +  + LR AG+   +     G +
Sbjct: 311 IIELLREENLAPEPQGS----DVYIVHQGDEAQVQALVAAERLRDAGLDVILHASAEGRN 366

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +F +Q K AD      A+I G  E + G++QIK L                     AQ 
Sbjct: 367 GSFKSQFKRADASGAAYAVIIGDDEVASGVVQIKPLR--------------GDPNADAQQ 412

Query: 475 TIPISELVSTVKKILQENKE 494
           T+P  +LV  +   +  N +
Sbjct: 413 TVPSDQLVDRLIDAMVANSD 432


>gi|78044066|ref|YP_361018.1| histidyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123743144|sp|Q3AA16|SYH_CARHZ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|77996181|gb|ABB15080.1| histidyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 423

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 97/462 (20%), Positives = 181/462 (39%), Gaps = 53/462 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E+ +   I    R +   +G+  I TP+ E+++   + + +  D 
Sbjct: 1   MLTQKPKGTNDLFPPEVFLWEEIERKFREVCRRFGYQEIRTPIFEHTELFERGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TA + R   E        P + + IGP+FR +K   GR
Sbjct: 61  VEKEMYTFLDKAGRSITLRPEGTAAVIRAYVEAKKYADPGPAKYFYIGPMFRYDKPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIG 183
            RQF Q  V+ +GS     DAE+ +M  +    +G+   +  +      +    + EK+ 
Sbjct: 121 LRQFHQLGVEILGSDEPMVDAEVILMALEFYREIGLNDVELRLNSVGCPECRKSLREKLI 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            + +++  E   + +A     +     +++L  +  +             ++     +S 
Sbjct: 181 NYFEERKEELCDLCKA-----RLNRNPLRILDCKNES---------CQKIAQNAPTPLSE 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D  +   E+ + +                            +  I   +VRGL+YYT
Sbjct: 227 LCPDCREHFTEVRKYLD-----------------------LAQVKYVIDPFLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E ++               S+GGGGRY+GL+    G + P  GF++G  R I+ALK
Sbjct: 264 KTAFEFVVPE--------IGAQSSIGGGGRYNGLIREIGGPDQPGIGFALGEERTILALK 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                 +    +    +       ++          LR   +  E      K+   QLK 
Sbjct: 316 RK----SEEISVPVPDLFVCLLGEEAREYGFPLINELRRLNLWVETDY-QGKSLKAQLKA 370

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A+R     A+I G  E   G   ++DL  G+++         
Sbjct: 371 ANRLKAKAALIIGEEELKSGRFILRDLDTGEQVELSRDELIE 412


>gi|323340840|ref|ZP_08081092.1| histidine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091963|gb|EFZ34583.1| histidine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 435

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 96/464 (20%), Positives = 183/464 (39%), Gaps = 49/464 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-D 64
           K++ + P+G AD    +      I    R +++ + +  + TP+ E  +   +   +  D
Sbjct: 10  KMKYQRPKGTADILPGDSEKWQFIEKKARALFKKFRYQEMRTPIFENFEVFSRTSGETSD 69

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHG 121
              K ++   D   + ++LR + TA   R   EN      I  P +TY IGP+FR E+  
Sbjct: 70  IVTKEMYDFFDKGDRHVTLRPEGTAGFVRSYVENKLYGPEIQKPFKTYYIGPMFRYERPQ 129

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GRFR+F Q  V+  G    T D E+  M  + L++ G+      +             +
Sbjct: 130 AGRFREFHQIGVEAFGVDNPTLDVEVIAMAIELLKSFGLNSLKLALNTLGDNESRAAYRQ 189

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             +   +     L    + D  ++     +++L  +   D             E    ++
Sbjct: 190 ALIDYLEPFEAEL----SDDSKERLHKNPLRVLDSKDEGDQK---------IVEGAPSIL 236

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L+ D +K    +  L+                              +I S +VRGL+Y
Sbjct: 237 DYLTDDAKKHFETVKSLLDDL-----------------------GIEYEIDSNMVRGLDY 273

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   ++E +    V + K   V       GGRY+GLV +  G   P  GF++G+ RL++ 
Sbjct: 274 YNHTIFEIMSDSKVFSGKWTTV-----CAGGRYNGLVEQLGGPETPGIGFALGVERLLLI 328

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L++ E + +   ++    +  +     + ++       LR+ G  A+     S+    Q 
Sbjct: 329 LEAEEDAFDIENDLD---VYVVGIGESTNAETLKIAMSLRSQGFSADRDY-LSRKPKAQF 384

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           K A + +    +  G  E + G   +K +  G+E+S  + +   
Sbjct: 385 KTASKLDAKYTLTIGETELAEGKANLKKMETGEEISVSLNDVYE 428


>gi|157149956|ref|YP_001451310.1| histidyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189082316|sp|A8AZV0|SYH_STRGC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|157074750|gb|ABV09433.1| histidyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 426

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 99/472 (20%), Positives = 176/472 (37%), Gaps = 52/472 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + +  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEEFARETFRKYNYAEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKEIGITNVSLELNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D          +  E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDK---------VAVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSAYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+      I  +   ++   K     Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV-ELPIEMGLDAYIAVLGAGAN--GKALELVQSLRAQGFAAERDY-LDRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            AD       I  G  E   G L +K+    +E++   +  ++  +  +AQI
Sbjct: 373 SADIFQAKTIITLGESELESGELTVKNNVTRQEVTVAFEAIKTDFQGVLAQI 424


>gi|167763155|ref|ZP_02435282.1| hypothetical protein BACSTE_01525 [Bacteroides stercoris ATCC
           43183]
 gi|167698449|gb|EDS15028.1| hypothetical protein BACSTE_01525 [Bacteroides stercoris ATCC
           43183]
          Length = 453

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 150/486 (30%), Positives = 216/486 (44%), Gaps = 61/486 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGLTDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILSGIAEIIGESDK-----IVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS   E+ +  L +++  +  G KG  E   I + +   
Sbjct: 227 ------GISDEAIAKLQPIILLSGSNEEKLATLKQVLSASEEGLKGVEESEFILKTLSAL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S        +R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTQLLFINFGEKEAAFS--MNVLTQVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  S K    Q+ YA+ +  P   + G  E + G + +K++  G++     + 
Sbjct: 389 AGIRAEIFPDSCK-MKKQMGYANSKMIPFVALVGENEMNEGKVTLKNMETGEQKLITPEE 447

Query: 463 NESWRE 468
             S   
Sbjct: 448 LVSELS 453


>gi|187778364|ref|ZP_02994837.1| hypothetical protein CLOSPO_01956 [Clostridium sporogenes ATCC
           15579]
 gi|187771989|gb|EDU35791.1| hypothetical protein CLOSPO_01956 [Clostridium sporogenes ATCC
           15579]
          Length = 415

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 187/468 (39%), Gaps = 62/468 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + +  RNI  ++G   I TP+ EY++   + + +  D 
Sbjct: 1   MSLQAPKGTKDLLPTESYKWQYLENKFRNIAADFGCREIRTPVFEYTELFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + T+P  R   E        P + Y   PV R E    GR
Sbjct: 61  VQKEMYTFEDKAGRSITLKPEGTSPAVRAFVEGRLFNETQPTKMYYFTPVMRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQ  Q  ++  G+   + DAE+  +     + +G+       +       RK  +  L+
Sbjct: 121 LRQHHQFGIEIFGAKDASVDAEVISIPVRIYKELGVNGVELNINSIGCPKCRKTYNEALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K      DKL              +F    +++L  + + D   +  K A +       +
Sbjct: 181 KYLSKNYDKL--------CSTCKTRFDKNPLRIL--DCKVDTCKEIVKDAPI-------I 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++  + ++    L   +                          +   K+   IVRGL+
Sbjct: 224 LDYICDECKEHFESLKSYLD-----------------------VLNINYKVDPFIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+  V+E I                ++  GGRYD L+    G ++PA GF +G+ RL++
Sbjct: 261 YYSKTVFEFITDD------------ITICAGGRYDYLIEEIGGPSMPAVGFGMGMERLLL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+        I E   V +   +    +  +     + LR   I+ E+     K+   Q
Sbjct: 309 TLQEK---AIEIPEEAYVDLYLGNMGDKAKLEVLKLAKELRDRHIKCEIDH-MGKSVKAQ 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +KYA+R     +++ G  E + G   +K +  G+++   IK+ ++  +
Sbjct: 365 MKYANRIGAKYSMVLGEEELNTGKATVKRMEDGEQIEVNIKDIDTLIK 412


>gi|332822166|ref|XP_003310918.1| PREDICTED: probable histidyl-tRNA synthetase, mitochondrial isoform
           1 [Pan troglodytes]
 gi|119582423|gb|EAW62019.1| histidyl-tRNA synthetase-like, isoform CRA_a [Homo sapiens]
 gi|194373607|dbj|BAG56899.1| unnamed protein product [Homo sapiens]
          Length = 481

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 123/486 (25%), Positives = 215/486 (44%), Gaps = 48/486 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D   + + +R +ILD + + ++ +G   ++TP  E  ++L +   ++   +  ++ L
Sbjct: 37  GTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGED---SGLMYDL 93

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRFRQFIQC 131
           +D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E      GR+R+F QC
Sbjct: 94  KDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPTIVQGRYREFCQC 150

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
           D D  G        +   +        G++  D+ I +N+R+I+DG+    G+       
Sbjct: 151 DFDIAGQFD-PMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAVCGVPES---- 205

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +   +  +IDKLDK   + V+            +      L  E  D +  ++      S
Sbjct: 206 KFRAICSSIDKLDKMAWKDVR-----------HEMVVKKGLAPEVADRIGDYVQCHGGVS 254

Query: 252 MHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           + E       +       +G  +L ++ E +   G  +++I    ++ RGL+YYTG +YE
Sbjct: 255 LVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARGLDYYTGVIYE 313

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVALKSLE 366
           A+L        ++P+  GSV  GGRYDGLV  F      VP  G SIG+ R+   ++   
Sbjct: 314 AVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERIFYIVEQRM 373

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +           +       + L +       L  +GI+AEM   ++     QL Y + 
Sbjct: 374 KTKGEKVRTTETQVFVATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKLLTQLHYCES 433

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              PL +I G  E   G+++I+ +A  +E++                  I     V+ ++
Sbjct: 434 TGIPLVVIIGEQELKEGVIKIRSVASREEVA------------------IKRENFVAEIQ 475

Query: 487 KILQEN 492
           K L E+
Sbjct: 476 KRLSES 481


>gi|53723541|ref|YP_103004.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67639883|ref|ZP_00438712.1| histidine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|76811640|ref|YP_333748.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121598300|ref|YP_993153.1| histidyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385953|ref|YP_001026072.1| histidyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449975|ref|YP_001080660.1| histidyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167002242|ref|ZP_02268032.1| histidine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167893949|ref|ZP_02481351.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167910640|ref|ZP_02497731.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167918669|ref|ZP_02505760.1| histidyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217421587|ref|ZP_03453091.1| histidine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|237812548|ref|YP_002896999.1| histidine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|254177586|ref|ZP_04884241.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254189058|ref|ZP_04895569.1| histidyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254199950|ref|ZP_04906316.1| histidyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254206283|ref|ZP_04912635.1| histidyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254260769|ref|ZP_04951823.1| histidine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297428|ref|ZP_04964881.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254358302|ref|ZP_04974575.1| histidyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81685079|sp|Q62JW5|SYH_BURMA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123598924|sp|Q3JRQ5|SYH_BURP1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227948|sp|A3MK74|SYH_BURM7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227949|sp|A2S2A3|SYH_BURM9 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227950|sp|A1V4K0|SYH_BURMS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|52426964|gb|AAU47557.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76581093|gb|ABA50568.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121227110|gb|ABM49628.1| histidyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293973|gb|ABN03242.1| histidine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126242845|gb|ABO05938.1| histidine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147749546|gb|EDK56620.1| histidyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147753726|gb|EDK60791.1| histidyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148027429|gb|EDK85450.1| histidyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157806820|gb|EDO83990.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157936737|gb|EDO92407.1| histidyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160698625|gb|EDP88595.1| histidyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|217395329|gb|EEC35347.1| histidine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|237505085|gb|ACQ97403.1| histidine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238520494|gb|EEP83953.1| histidine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243062059|gb|EES44245.1| histidine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254219458|gb|EET08842.1| histidine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 446

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 104/499 (20%), Positives = 200/499 (40%), Gaps = 66/499 (13%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + +
Sbjct: 5   KRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ ++LR + TA + R   E+      P R + +GP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         G+ E
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSL------GLAE 178

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +   H  + +      +  +D   +  L    L + + +     +  + A         +
Sbjct: 179 ERAAHRVELIKYLEQHVDKLDDDAQRRLYTNPLRVLDTKNPALQEIVRNA-------PQL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL          L +L+K                              I+  +VRGL+
Sbjct: 232 IDFLGDVSRAHFDGLQQLLKANNL-----------------------PFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++G+ R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNF 417
            LK          E   V +  +     +  +  +  + LR  G+   +     G+  +F
Sbjct: 321 LLKEEHLVP----EQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQITI 476
            +Q+K AD      A+I G  E + G + +K L   G E  + +            Q ++
Sbjct: 377 KSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRGTGAEGEKNV------------QQSV 424

Query: 477 PISELVSTVKKILQENKEE 495
           P+  L   +   +    E+
Sbjct: 425 PVESLTEFLINAMVATAED 443


>gi|325686499|gb|EGD28527.1| histidine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 426

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 171/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKPSL----SADSQRRLEENPLRVLDSKEAEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSAYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    +     + +      +D+  +     Q LRT G  AE      +    Q K
Sbjct: 317 DKQGV---ELPIETALDVYVAVLGADANGRALELVQALRTQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADIFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQIQE 415


>gi|327490405|gb|EGF22189.1| histidine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 426

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 96/463 (20%), Positives = 171/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSAYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+    V +  +   ++         Q LRT G  AE      +    Q K
Sbjct: 317 DKQGV-ELPIETALDVYVAVLGPGANGR--ALELVQALRTQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADIFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQIQE 415


>gi|332365004|gb|EGJ42769.1| histidine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 426

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 94/463 (20%), Positives = 170/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFKKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSTYFAAVRSMLETL-----------------------QIPYIINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       +  V +  +   ++         Q LR  G  AE      +    Q K
Sbjct: 317 DKQGVKLPIEIALD-VYVAVLGAGANGR--ALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADIFKAKTLITLGESEVESGQVTVKNNHNREEITVSLDQIQE 415


>gi|198434351|ref|XP_002125799.1| PREDICTED: similar to LOC445827 protein [Ciona intestinalis]
          Length = 506

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 127/496 (25%), Positives = 217/496 (43%), Gaps = 49/496 (9%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K   + P+G  D   K++ IR  + D++   ++ +G   I+TP+ E  ++L     ++ 
Sbjct: 51  QKFTLKTPKGTRDYDPKQMAIRETVFDTVVRCFKRHGASTIDTPVFELKETLTNKYGED- 109

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K ++ L+D  G+ +SLRYDLT P ARY+A N    +             N     GR
Sbjct: 110 --SKLIYDLKDQGGEMLSLRYDLTVPFARYMAMNNIQTIKRYHIA-KVYRRDNPAMTRGR 166

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F QCD D  G          C+ +   + +  +K  D+ I +N+R+ILDGI    G 
Sbjct: 167 YREFYQCDFDIAGHYDPMIPDAECLRIVSEILS-ELKLGDFVIKVNDRRILDGIFAVCGC 225

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D    +      A+DKLDK     VK  + E              LT E  D + S++
Sbjct: 226 PDD----KFRQACSAVDKLDKLPWSDVKAEMLEK------------GLTEESCDKIGSYV 269

Query: 245 SIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +     + E     E +        G  ++ V+ + +      +NR++   ++ RGL+Y
Sbjct: 270 QMAGGLQLVEKLLSNEELNQNKLALAGLTDMKVLLQYLDLF-QVTNRVQFDLSLARGLDY 328

Query: 302 YTGCVYEAIL----GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ--NVPATGFSIGI 355
           YTG ++EAIL           K + V  GS+ GGGRYDGLV  F  +  +VP  G SIG+
Sbjct: 329 YTGPIFEAILLGNQDANKERVKGETVGVGSIAGGGRYDGLVGSFHPKGKSVPCVGVSIGV 388

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R+   +++               +         + +       L  A I+AEM    + 
Sbjct: 389 ERIFSIIEANIKKEKGKTRTNDTQVFVASPQKGFVEEKMKIINELWNANIKAEMSYKKNP 448

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
              NQ+++ +    PLA+I  +GE   G ++I+ +   +E                   T
Sbjct: 449 KMLNQMQHCEESGIPLAVIVASGELDAGTVKIRSVGSREE------------------RT 490

Query: 476 IPISELVSTVKKILQE 491
           +  S++V  +K++++ 
Sbjct: 491 VDRSKMVDELKEMIRS 506


>gi|327463740|gb|EGF10056.1| histidine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 426

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 94/463 (20%), Positives = 170/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESARWQYVEDFARKTFKKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRRA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSTYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       +  V +  +   ++         Q LR  G  AE      +    Q K
Sbjct: 317 DKQGVDLPIETALD-VYVAVLGTGANGR--ALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADIFKAKTLITLGESEVESGQVTVKNNYNREEITVSLDQIQE 415


>gi|309782320|ref|ZP_07677047.1| histidine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308918938|gb|EFP64608.1| histidine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 450

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 107/510 (20%), Positives = 195/510 (38%), Gaps = 86/510 (16%)

Query: 1   MGKKTKLRAEL---PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M    K R +     +G  D    +  +     +++R++   YG+  I TP++E +    
Sbjct: 11  MSDTQKQRVQKIAGVKGMNDLLPADAPLWEHFDNAVRSMLRAYGYQQIRTPIVEQTQLFV 70

Query: 58  KFLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
           + + +  D   K +++  D  +G+ +++R + TA   R V E+      P R +  GP+F
Sbjct: 71  RGIGEVTDIVEKEMYTFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMF 130

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHI 167
           R+E+   GR+RQF Q  V+ +G +    DAE+ +M     + +G                
Sbjct: 131 RHERPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEE 190

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              +R  L   LE      D+            D   +     +++L  +          
Sbjct: 191 RAAHRADLIKYLEGFQDILDE------------DGKRRLYSNPLRVLDTKNPALQDMAAG 238

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                       ++ +L  +       + +L+K                         + 
Sbjct: 239 ---------APKLIDYLGDESRAHFEGVQKLLKAN-----------------------NI 266

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
              I+  +VRGL+YY   V+E            K    G+V GGGRYD L+ +  G+  P
Sbjct: 267 PFTINPRLVRGLDYYNLTVFEWTT--------DKLGAQGTVAGGGRYDPLIEQIGGKPAP 318

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           A G+++G+ R+I  L+  +       E     +  +    ++  +  +  + LR AG+  
Sbjct: 319 ACGWAMGVERIIELLREEKLEP----EAQGCDVYIVHQGDEAQVQALIAAERLRDAGLDV 374

Query: 408 EMFL---GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            +     G + +F +Q K AD      A+I G  E ++G+ QIK L              
Sbjct: 375 ILHASPEGRNGSFKSQFKRADASGASYAVIIGDDEVTQGVAQIKPLR------------- 421

Query: 465 SWREARVAQITIPISELVSTVKKILQENKE 494
                  AQ T+P  +LV  +   L  N +
Sbjct: 422 -GDPTADAQQTVPSDQLVDRLIDALVANND 450


>gi|222110304|ref|YP_002552568.1| histidyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254782328|sp|B9MFX7|SYH_DIAST RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|221729748|gb|ACM32568.1| histidyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 429

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 92/467 (19%), Positives = 183/467 (39%), Gaps = 56/467 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    +      + D +R +   Y +  I TP++E +    + L +  D  
Sbjct: 3   KLVAIKGMNDILPPDSARWEWLEDKVRTLMARYAYRNIRTPIVEPTPLFVRGLGEVTDIV 62

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S +D  +G+ ++LR + TA + R V E+        R Y +GP+FR+E+   GR+
Sbjct: 63  EKEMYSFEDRLNGEQLTLRPEATAGVVRAVVEHSMLYDGGKRLYYMGPMFRHERPQRGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +G     ADAE+ ++       +G++     +    +           + 
Sbjct: 123 RQFHQIGAEALGFPGAEADAEIILLAHALWAELGLENVRLELNSLGQPDERRAHRAALIA 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             ++  + L      D   +     +++L  +     +           E    ++ FL 
Sbjct: 183 YLEQHMDVLD----EDARRRLHSNPLRILDTKNPAMQA---------LVEGAPRLIDFLG 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               +    +  ++                               ++  +VRG++YY   
Sbjct: 230 EASLQHFETVKAILDANGVA-----------------------WSLNPRLVRGMDYYNLT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G++ GGGRYD L+ +  G+  PA G+++G+ R++  LK  
Sbjct: 267 VFEFVT--------DQLGSQGTICGGGRYDYLIEQIGGKFAPAVGWALGVERVLELLKEQ 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS-----KNFGNQ 420
           E+           ++     D+ +L       Q LR  G+  +M   ++      +  +Q
Sbjct: 319 ETQVARPAADAYAVV----PDASALPVVMAALQRLRAQGVSVQMHSPTAAGEGMGSMKSQ 374

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
            K AD      A++ G  E +RG + +K L   G++  R +     W
Sbjct: 375 FKKADASGARYALVFGADELARGAVTVKPLRDSGEQAERPLAALAEW 421


>gi|290508293|ref|ZP_06547664.1| histidyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289777687|gb|EFD85684.1| histidyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 414

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 98/466 (21%), Positives = 179/466 (38%), Gaps = 68/466 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    E  +  RI  S++ +  +YG+  I  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDYLPGETALWQRIEGSLKQVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  ++LR + TA   R   E+        R + +GP+FR+E+   GR+RQF Q   
Sbjct: 61  EDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRHERPQKGRYRQFHQIGA 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILEKIGL 184
           +  G      DAE+ M+ A     +G                   N R  L   LE+   
Sbjct: 121 EVFGLQGPDIDAELIMLTARWWRELGIADHVSLELNSIGSLEARANYRDALVAYLEQFTD 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D+            D   +     +++L  +                      +  +L
Sbjct: 181 KLDE------------DSKRRMYTNPLRVLDSKN---------PDVQALLNDAPALGDYL 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + +     L  L+                            R  ++  +VRGL+YY  
Sbjct: 220 DEESKTHFAGLCALLDDA-----------------------GIRYTVNQRLVRGLDYYNR 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +               G+V  GGRYDGLV +  G+  P  GF++G+ RL++ +++
Sbjct: 257 TVFEWVTTS--------LGSQGTVCAGGRYDGLVEQLGGRATPGVGFAMGLERLVLLVQA 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLK 422
           +       K    V I  +   +D+ S      + +R A  G++     G   NF  Q  
Sbjct: 309 VN---PEFKADPVVDIYLVASGTDTQSAAMRLAEQVRDALPGVKLMTNHGGG-NFKKQFA 364

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            AD+    +A++ G  E + G + +KDL  G++ +   ++  +   
Sbjct: 365 RADKWGARIALVVGESEIADGNVVVKDLRSGEQTTVTQESVAAHLR 410


>gi|303254927|ref|ZP_07341011.1| histidyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259625|ref|ZP_07345601.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262070|ref|ZP_07348015.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264527|ref|ZP_07350446.1| histidyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303267199|ref|ZP_07353065.1| histidyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|301802793|emb|CBW35567.1| histidyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302598109|gb|EFL65171.1| histidyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636710|gb|EFL67200.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639177|gb|EFL69636.1| histidyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302643263|gb|EFL73544.1| histidyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645897|gb|EFL76125.1| histidyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 429

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 101/461 (21%), Positives = 178/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E     + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESRQVTVKNNQTREEVQVLLETI 413


>gi|149017270|gb|EDL76321.1| rCG49571, isoform CRA_b [Rattus norvegicus]
          Length = 489

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 120/460 (26%), Positives = 220/460 (47%), Gaps = 30/460 (6%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     ++P+G  D   +++ +R +ILD I + ++ +G   ++TP  E  + L +   D 
Sbjct: 53  KPNFIIKVPKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDN 112

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
                 ++ L+D  G+ +SLRYDLT P ARY+A N    +      ++G V+R E     
Sbjct: 113 FGL---MYDLEDQGGELLSLRYDLTVPFARYLAMNKLKRMKRY---QVGKVWRRESPAIV 166

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G          C+ +   + + G++  D+ I +N+R+++DG+   
Sbjct: 167 QGRYREFCQCDFDIAGEFDPMIPDAECLRIMCEILS-GLQLGDFLIKVNDRRVVDGMFAV 225

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  ++DKLDK   + V+L           +   G  L  E  D + 
Sbjct: 226 CGVPES----KFRTICSSMDKLDKMSWEDVRL-----------EMVAGKGLAPEVADRIG 270

Query: 242 SFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +  +    +G  +L ++ E +R  G  +++I +  ++ RG
Sbjct: 271 DYVQCHGGISLVEELFKDPRLSQSQLALQGLGDLKLLFEYLRLFGI-ADKISLDLSLARG 329

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGIS 356
           L+YYTG +YEA+L        ++ +  GSV  GGRYD LV++F     +VP  G SIG+ 
Sbjct: 330 LDYYTGVIYEAVLLESPAQAGKETLNVGSVAAGGRYDRLVAQFDPKGHSVPCVGLSIGVE 389

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++     +          +       + L +       L  AGI+AEM   ++  
Sbjct: 390 RIFYLVEQKMKISCEKVRTTETQVFVATPQKNFLQERLKIIAQLWDAGIKAEMLYKNNPK 449

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              QL Y ++ + PL +I G  E++ G+++++ +A  +E+
Sbjct: 450 LLTQLHYCEKEDIPLMVIIGEQEQNEGVVKLRSVASREEV 489


>gi|152971375|ref|YP_001336484.1| histidyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|330007780|ref|ZP_08306077.1| histidine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|150956224|gb|ABR78254.1| histidyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|328535324|gb|EGF61809.1| histidine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 414

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 98/466 (21%), Positives = 179/466 (38%), Gaps = 68/466 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    E  +  RI  S++ +  +YG+  I  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDYLPGETALWQRIEGSLKQVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  ++LR + TA   R   E+        R + +GP+FR+E+   GR+RQF Q   
Sbjct: 61  EDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRHERPQKGRYRQFHQIGA 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILEKIGL 184
           +  G      DAE+ M+ A     +G                   N R  L   LE+   
Sbjct: 121 EVFGLQGPDIDAELIMLTARWWRELGISEHVSLELNSIGSLEARANYRDALVAYLEQFTD 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D+            D   +     +++L  +                      +  +L
Sbjct: 181 KLDE------------DSKRRMYTNPLRVLDSKN---------PDVQALLNDAPALGDYL 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + +     L  L+                            R  ++  +VRGL+YY  
Sbjct: 220 DEESKAHFAGLCALLDDA-----------------------GIRYTVNQRLVRGLDYYNR 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +               G+V  GGRYDGLV +  G+  P  GF++G+ RL++ +++
Sbjct: 257 TVFEWVTTS--------LGSQGTVCAGGRYDGLVEQLGGRATPGVGFAMGLERLVLLVQA 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLK 422
           +       K    V I  +   +D+ S      + +R A  G++     G   NF  Q  
Sbjct: 309 VN---PEFKADPVVDIYLVASGTDTQSAAMRLAEQVRDALPGVKLMTNHGGG-NFKKQFA 364

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            AD+    +A++ G  E + G + +KDL  G++ +   ++  +   
Sbjct: 365 RADKWGARVALVVGESEIADGNVVVKDLRSGEQTTVTQESVAAHLR 410


>gi|126290824|ref|XP_001377080.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 516

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 123/479 (25%), Positives = 226/479 (47%), Gaps = 31/479 (6%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            +K+    + P+G  D   +++ IR +IL+++ N ++ +G   I+TP+ E  + L +   
Sbjct: 61  KEKSSFVIKTPKGTRDLSPQQMAIREKILNAVINCFKCHGAKGIDTPVFELKEILTEKYG 120

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +E   ++ ++ L+D  G+ ++LRYDLT P ARY+A N    +   + Y +G V+R E   
Sbjct: 121 EE---SRLIYELKDQGGELLALRYDLTVPFARYLAMNK---IKKMKRYHVGKVWRRESPS 174

Query: 122 --PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F QCD D  G          C+ +   + +  ++  D+ I +N+R+++DG+ 
Sbjct: 175 IIQGRYREFCQCDFDIAGQFDPMIPDAECLKIIHEILST-LQLGDFLIKVNDRRVVDGMF 233

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+      N+   +  ++DKL K   + V+            + T    LT +  D 
Sbjct: 234 AVCGVPD----NKFRFICASVDKLGKMSWKDVR-----------QEMTGKIGLTPDVADQ 278

Query: 240 MVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +  ++      S+ E       +       +G  +L ++ E +   G    +I    ++ 
Sbjct: 279 IGDYIQQCGGVSLVEQLLQDPKLSQNKQALEGLKDLKLLFEYLTLFGIAE-KISFDLSLA 337

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIG 354
           RGL+YYTG +YEA+L      + ++ +  GSV  GGRYDGLV  F    + VP  G SIG
Sbjct: 338 RGLDYYTGVIYEAVLLQSPTQQGEEALGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIG 397

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + R+   ++          +     +       + L +       L  AGIRAEM    +
Sbjct: 398 VERIFSIVEQR-MEATKKIQTTETQVLVATAQKNFLRERMKLIAELWDAGIRAEMLYKKN 456

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +F  QL Y +    PL  I G  E   G+++++ +A  KE+  + ++  +  + R+++
Sbjct: 457 PSFLTQLHYCEETGIPLVAIIGEQELKDGVIKLRSVASRKEVDIKREDIVTEIQRRMSE 515


>gi|303269709|ref|ZP_07355463.1| histidyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302640742|gb|EFL71135.1| histidyl-tRNA synthetase [Streptococcus pneumoniae BS458]
          Length = 426

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 101/461 (21%), Positives = 178/461 (38%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R I++ Y +  + TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVEGFAREIFKRYNYAEVRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GSS    D E   M A  L+ +GI+    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAHFLKEIGIQGVKLHLNTLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKETL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 FLDEESQAHFDAVRQMLENLGVD-----------------------YIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         +V  GGRYDGLV+ F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEGND--------LTVCAGGRYDGLVAYFGGPETAGFGFGLGVERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   I+    V I  +   ++   K     Q LR  G +AE     ++    Q K
Sbjct: 317 EKQGVAL-PIENALDVYIAVLGDGANV--KALELVQALRQQGFKAERDY-LNRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD       I  G  E     + +K+    +E+   ++  
Sbjct: 373 SADVFAAKTLITLGESEVESRQVTVKNNQTREEVQVLLETI 413


>gi|302503456|ref|XP_003013688.1| hypothetical protein ARB_00135 [Arthroderma benhamiae CBS 112371]
 gi|291177253|gb|EFE33048.1| hypothetical protein ARB_00135 [Arthroderma benhamiae CBS 112371]
          Length = 586

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 127/536 (23%), Positives = 218/536 (40%), Gaps = 73/536 (13%)

Query: 1   MGKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M  K K     + P+G  D    +  +R+ I  +I N+++ +G   ++TP+ E  + L  
Sbjct: 60  MAPKGKNSFTLKTPKGTKDWSGPDALLRDNIFSTITNVFKRHGGMALDTPVFELREILAG 119

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                  
Sbjct: 120 KYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRNIKRYHLAKVYRRDQP 176

Query: 119 KHGPGRFRQFIQCDVDNVG--SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
               GR R+F QCD D  G       AD+E+  ++ +  E +G  +  Y I +N+RKILD
Sbjct: 177 AMTKGRMREFYQCDFDIAGAQFDPMVADSEVLKIVTEVFEDLG-WKGKYTIKVNHRKILD 235

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ E  G+  D    +   +  A+DKLDK   + V+  + +              L    
Sbjct: 236 GLFEVCGVPQD----KIRTISSAVDKLDKLPWEDVRKEMVDE-----------KGLDGAV 280

Query: 237 IDIMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            D + +++     + + E     E +    + + G +++ ++ E +   G   ++I    
Sbjct: 281 ADSIQTYVVRKGRRDLLESLLTDEKLTANASAKAGLDDMALLLEYLEDFGVV-DKISFDM 339

Query: 294 TIVRGLEYYTGCVYEAILGF---------------------------PVMNEKQKPVVFG 326
           ++ RGL+YYTG +YE I                                       V  G
Sbjct: 340 SLARGLDYYTGLIYEVITEGSAPATATSAPEAQALQRSSKKDKKVDPDEDRSNDPSVGVG 399

Query: 327 SVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKSLESSTNNIK--EMGPVLITTM 383
           SV  GGRYD LV  F  +  +P  G S G+ R+    K+     +N        V +  M
Sbjct: 400 SVAAGGRYDDLVGMFSPKAQIPCVGVSFGVDRIFSITKARMQRESNANALRSSEVDVYVM 459

Query: 384 DHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
                     L +     + L  AGI+AE           Q K A+    P A+I G  E
Sbjct: 460 AFGGKGFTGLLKERMQICRSLWEAGIKAEFSYKVKPKLPAQFKAAETNGIPFAVILGEDE 519

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
            + G +++K++         + +    +E     + + +  L + +K+ L++   E
Sbjct: 520 LAAGQVRVKEM--------GLPDGHPEKEG----VLVDVDSLTTEIKQRLEKKASE 563


>gi|135124|sp|P07178|SYHC_MESAU RecName: Full=Histidyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|68566|pir||SYHYHT histidine-tRNA ligase (EC 6.1.1.21) - Chinese hamster
 gi|49632|emb|CAA28957.1| unnamed protein product [Mesocricetus auratus]
          Length = 508

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 111/477 (23%), Positives = 198/477 (41%), Gaps = 31/477 (6%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPD 62
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L GK+  D
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIICCFKRHGAEVIDTPVFELKETLMGKYGQD 110

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                K ++ L+D  G+ +SLRYDLT P  RY+A N  T +          V+R +    
Sbjct: 111 ----CKLIYDLKDQGGELLSLRYDLTVPFGRYLAMNNLTNIKRYHI---AKVYRRDNPAM 163

Query: 123 GRFRQFIQCDVDN-VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            R R      VD  +    +    +   +         ++   + + +N+R+ILDG+   
Sbjct: 164 TRGRYLNSITVDFDIAGQFDPMIPDAECLKIMCEILSSLQIGKFLVKVNDRRILDGMFAV 223

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  ++DKLDK   + VK            +      L  E  D + 
Sbjct: 224 CGVPDS----KFRTICSSVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIG 268

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++    E  + E       +       +G  +L ++ E +   G   ++I    ++ RG
Sbjct: 269 DYVQQHGEVCLVEQLLQDPKLSQNKQAVEGLGDLKLLFEYLTLFGI-DDKISFDLSLARG 327

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGIS 356
           L+YYTG +Y A+L        ++P   G  G   RYDGL  +   KG+ VP  G SIG+ 
Sbjct: 328 LDYYTGVIYVAVLLQMPTGAGEEPWC-GQCGCWRRYDGLVGMFDPKGRKVPCVGLSIGVE 386

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    +           +                   L  AGI+AE+    +  
Sbjct: 387 RIFSIVEQRLEALEEKVRTTETQVLVASAQKKLAGGETKACLQLWDAGIKAELLYKKNPK 446

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++       R  Q
Sbjct: 447 LLNQLQYCEETGIPLVAIIGEQELKDGVIKLRSVASREEVDVRREDLVEEIRRRTNQ 503


>gi|332799864|ref|YP_004461363.1| Histidyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697599|gb|AEE92056.1| Histidyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 438

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 142/465 (30%), Positives = 212/465 (45%), Gaps = 34/465 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++     GF +   K+  + N I D IRN YE +GF PI+TPL+E S+ L    
Sbjct: 1   MSK-DIVKPSTLPGFLELLPKDQILFNEIKDIIRNTYEKHGFIPIDTPLIEKSEILLAKG 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             E    K ++         ++LR+DLT PLARYVA++F  + FP R Y IG V+R EK 
Sbjct: 60  GGE--TEKQIYRFT-KGDTDMALRFDLTVPLARYVAQHFSELTFPFRRYHIGKVYRGEKS 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFR+F QCDVD +G+       +  ++         +   ++ I INNRKIL+G   
Sbjct: 117 QRGRFREFYQCDVDIIGNGKLNVIYDAEILSIIYCTFKNLGFENFTIKINNRKILNGFFS 176

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +G+    ++      LRAIDKL+K G +GV   L                L+ + +  +
Sbjct: 177 SLGITNSVEV------LRAIDKLEKIGEKGVIDELI------------NLGLSRDAVTKI 218

Query: 241 VSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F+ I    E+ +  L  L   +   ++G  EL+ +++  +  G       I  TI RG
Sbjct: 219 LKFIQIRGNDEEKLQSLKSLNIESQIFQEGIKELITVTDYTKIFGVPEKNYTIDLTIARG 278

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG VYE  L              GSV  GGRY+ L   +  Q +P  G SIG++RL
Sbjct: 279 LDYYTGTVYETFL--------DDYPEIGSVCSGGRYENLAEYYTTQKLPGVGVSIGLTRL 330

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              LK      N+        +  +  D             LR   I +E++   +K  G
Sbjct: 331 FYQLKEAGLLENDTPS-TFTKVLIIPMDESFNGYAIKIANTLRENNIISEVYFEDAK-IG 388

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +L YA+  N P  I  G  E       +KD+  G +    + + 
Sbjct: 389 KKLNYANNLNIPYTIFIGDEEVKNQKASLKDMKSGFQALITVDDV 433


>gi|296393871|ref|YP_003658755.1| histidyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181018|gb|ADG97924.1| histidyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 429

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 107/482 (22%), Positives = 185/482 (38%), Gaps = 69/482 (14%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            KK++ + + P+G  D    E          +    E  G+ P+E P+ E +    + + 
Sbjct: 5   AKKSQ-KLQAPKGVPDYLPPESARFVAAKRVLAEAAELAGYRPVELPVFEDTALYVRGVG 63

Query: 62  -DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEK 119
              D   K +++  D  G+ ++LR + TA + R V E+       P + +  GP FR E+
Sbjct: 64  ASTDIVGKEMYTFPDQGGRSLTLRPEWTAGVVRAVVEHGLDRGQLPVKLWYAGPCFRYER 123

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINN 171
              GR+RQF Q  V+ +G      DAE   +  + L  +G            D       
Sbjct: 124 PQSGRYRQFQQMGVEAIGVDDPALDAEAVAVAEEGLRRLGLGGYRLEINSLGDEACRPEY 183

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
           R+ L   L  + L    +       LR +D         VK  L +              
Sbjct: 184 RERLLSFLRGLDLDEATRQRAERNPLRVLDDKRP----EVKAQLVD-------------- 225

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
                  ++V  LS   ++    + E ++G                             +
Sbjct: 226 -----APLLVDHLSDSAKEHFETVLEHLRGLGVA-----------------------YSL 257

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           S  +VRGL+YYT   +E +                ++GGGG YDGLV+   GQ +P  GF
Sbjct: 258 SPKLVRGLDYYTKTTFEFVHTG--------LGAQSALGGGGHYDGLVADLGGQPLPGVGF 309

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG+ R ++AL +      +      V +  +   +++  +       LR AGI  ++  
Sbjct: 310 SIGLERTLLALAAEGIPPQDSGS---VPVFGVALGAEAKGRMTSLAGALREAGIGVDLAY 366

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           G  +     ++ ADR      +I G  E +    Q+KD+  G++    + +  S   +R+
Sbjct: 367 G-DRALKAAMRAADRSGARFVLIIGEAELASEQAQLKDMRSGEQSCVPLPDVVSEMASRL 425

Query: 472 AQ 473
           A+
Sbjct: 426 AE 427


>gi|162139387|ref|YP_281288.2| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|83305880|sp|Q48QS7|SYH_STRPM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
          Length = 426

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 99/475 (20%), Positives = 178/475 (37%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   ++      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPEDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR R+F Q  V+  G++    D E   M     E +GIK    H+       +R      
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRSAYRQT 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L++        D   +     +++L  + + D          L  E+  
Sbjct: 181 LIDYLTPMRDQLSK--------DSQRRLDENPLRVLDSKEKEDK---------LAVEKAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +     + ++++                              I + +VRG
Sbjct: 224 SILDYLDEESQAHFEAVKDMLEAL-----------------------DIPYVIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL
Sbjct: 261 LDYYNHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++    +     EM    +        + SK     Q +R  G  AE      +   
Sbjct: 313 LMIIEKQGITLPIETEMD---VYLAVLGDSANSKALELVQAIRRQGFTAERDY-LGRKIK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD     L +  G  E   G   IK+    +E+    ++  +       Q
Sbjct: 369 AQFKSADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFANISEQ 423


>gi|332527854|ref|ZP_08403891.1| histidyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332112431|gb|EGJ12224.1| histidyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 424

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 99/467 (21%), Positives = 181/467 (38%), Gaps = 55/467 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    E        D++R +   Y +  + TP++E++    + L +  D  
Sbjct: 4   KIVAVKGMNDILPPESARWEWFEDTVRALMRRYAYQNVRTPIVEHTPLFVRGLGEVTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G  +SLR + TA + R V E+        R + IGP+FR+E+   GR+
Sbjct: 64  EKEMYSFVDSMNGDPLSLRPEGTAGVVRAVVEHSALYDGGKRLFYIGPMFRHERPQRGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGL 184
           RQF Q  V+ +G      DAE+ +M     + +G+      I      +        +  
Sbjct: 124 RQFHQVGVEALGFGGPDVDAEVILMCRALWKDLGLGEVRLDINSLGQPEERKAHRAALIA 183

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +         L   D   +     +++L  +     +           E    ++ +L
Sbjct: 184 HFERHA-----ELLDEDARRRLHSNPLRILDTKNPAMQAM---------VEAAPQLIDYL 229

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                K    L  ++                              +++  +VRG++YY  
Sbjct: 230 GEASLKHFDALKAMLDAAGQ-----------------------PYRVNPRLVRGMDYYNL 266

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +          K    G++ GGGRYDGLV    G+  P  G+ +GI R++  ++ 
Sbjct: 267 TVFEWVT--------DKLGAQGTICGGGRYDGLVELVGGKPAPGIGWGMGIERVLDLVQQ 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L  +          ++     D  +L +     + LR AG+  ++ +G   +  +Q K A
Sbjct: 319 LGVAPPAPVPDAYAIV----PDGAALPQAMRVVEALRAAGVAVQLHVGGG-SMKSQFKKA 373

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAK--GKELSREIKNNESWREA 469
           D      A+I G  E +RG + +K L      + +R I +   W   
Sbjct: 374 DASGARHALIFGGDELARGEVAVKPLRDAAAAQTARPIADPAIWASE 420


>gi|60682707|ref|YP_212851.1| histidyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81314233|sp|Q5LAE0|SYH_BACFN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|60494141|emb|CAH08933.1| putative histidyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
          Length = 454

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 148/481 (30%), Positives = 215/481 (44%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGNYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNKELAEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++  +  G KG  E   I   ++  
Sbjct: 227 ------GISGEAIAKLQPIILLSGTNAEKLATLKTVLSDSETGLKGVEESEFILNTLQTM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S         R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTQLLFINFGEKEAAFS--MGILSKARA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  ++K    Q+ YA+ +N P   I G  E + G   +K++  G++     + 
Sbjct: 389 AGIRAEIFPDAAK-MKKQMSYANVKNIPFVAIVGENEMNEGKAMLKNMESGEQQLVTAEE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|327458581|gb|EGF04931.1| histidine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 426

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 169/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A     +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMITMAAQFFNDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKASL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSVLD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSIYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       +  V +  +   ++S        Q LR  G  AE      +    Q K
Sbjct: 317 DKQGVDLPIETALD-VYVAVLGAGANSR--ALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E++  +   + 
Sbjct: 373 SADIFKSKTLITLGESEVENGQVTVKNNHNREEITVSLDQIQE 415


>gi|53714701|ref|YP_100693.1| histidyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|81690615|sp|Q64QS2|SYH_BACFR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|52217566|dbj|BAD50159.1| histidyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 454

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 149/481 (30%), Positives = 216/481 (44%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNKELAEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++  +  G KG  E   I   ++  
Sbjct: 227 ------GISEEAIAKLQPIILLSGTNTEKLATLKTVLSDSETGLKGVEESEFILNTLQTM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S         R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTQLLFINFGEKEAAFS--MGILSKARA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  ++K    Q+ YA+ +N P   I G  E + G   +K++  G++     + 
Sbjct: 389 AGIRAEIFPDAAK-MKKQMSYANVKNIPFVAIVGENEMNEGKAMLKNMESGEQQLVTAEE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|255535813|ref|YP_003096184.1| histidyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342009|gb|ACU08122.1| Histidyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 451

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 143/480 (29%), Positives = 221/480 (46%), Gaps = 56/480 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED- 64
           ++  L +G  D    E+  R  I++ ++  +E +GF P+ETP  E   +L GK+  + D 
Sbjct: 1   MKPSLAKGTRDFTATEVVNRRAIINILQKNFELFGFQPLETPSFENLSTLTGKYGEEGDR 60

Query: 65  ----RPNKGVFSLQDDDGQW--------------ISLRYDLTAPLARYVAENFDTIVFPC 106
                 N G ++L+ +   W               +LRYDLT P AR+VA N   +VFP 
Sbjct: 61  LIFKILNSGDYALKTNGDDWNAKNSQKLIAQISEKALRYDLTVPFARFVAMNHGQLVFPF 120

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  +   +   + I      
Sbjct: 121 KRYQIQPVWRADRPQKGRYREFYQCDADVVGSESLWQEVELTQLYLKSFSELQIP---VT 177

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I +NNRKIL G+ E  G+       + +    A+DKLDK G  GV   L E         
Sbjct: 178 IHLNNRKILSGLAEYAGITE-----QLIDFTVALDKLDKIGKDGVIKELLEK-------- 224

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYEL---VKGTIAGEKGFNELVVISELVRKSG 283
               N++ E I  +  FL    E ++  L EL     G   G  G +EL V+       G
Sbjct: 225 ----NISEESISKL-DFLFSQSENALDNLKELKTKFAGNEIGTAGVDELEVVLTKCMDLG 279

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
            +S  +K   T+ RGL+YYTG ++E          K   V  GS+GGGGRYD L   F  
Sbjct: 280 ISSASLKFDITLARGLDYYTGAIFEV---------KANGVAMGSIGGGGRYDNLTEVFGV 330

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
           +N+P  G S G+ R+ + ++ L     N      V     ++      +       LR  
Sbjct: 331 KNIPGIGISFGLDRIYLVMEELALFPQNAAN--AVKYLFANYGESEALEATKIIAKLRAN 388

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           GI AE++  SSK    Q  YA+++  P  +  G  E +   + +K+L  G++ +  +   
Sbjct: 389 GISAELYPESSK-LKKQFTYAEKKGIPNLVFFGEQEIADRNITVKNLQSGEQETINLDTF 447


>gi|315641701|ref|ZP_07896746.1| histidine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482550|gb|EFU73084.1| histidine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 431

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 98/463 (21%), Positives = 181/463 (39%), Gaps = 58/463 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G  D    E      + ++ R ++++Y FD I TPL E+ + + + + D  D 
Sbjct: 1   MKYQRPKGTNDILPGESEKWQFVEETARLLFKDYQFDEIRTPLFEHIEVISRSVGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN         P + Y  GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPIVRSFVENKLYGPEFPKPYKVYYTGPMFRYERPQK 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR RQF Q  V+  GS     D E+  M     E +GI      I        R      
Sbjct: 121 GRLRQFHQIGVECFGSKNPATDVEIMAMALAFFEQLGISDLRLVINTLGDSETRVSYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L +     +++L        + D   +     +++L  + + D                 
Sbjct: 181 LIEYLTPFEEQL--------SADSKRRLHENPLRVLDSKDKKDKE---------IVANAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ + +     +  ++       +  + +                       VRG
Sbjct: 224 QILDYLTTESKTHFETVTAMLDTLGIVYEVDSNM-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT  ++E       M++        ++  GGRYD L+  F G++ P  GF IGI R+
Sbjct: 261 LDYYTHTIFEI------MHDSDALGTQSTICAGGRYDNLIEEFGGESTPGFGFGIGIERV 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L S       +  +  +    +    ++  +     Q +R AG  A+      +   
Sbjct: 315 LLTLDSEGI---ELPTIDTIDAYVVHLGDETNVEALKLVQAIRNAGFSADRDY-MGRKAK 370

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            Q K AD+    L +  G  E +   ++IK++A   E +  + 
Sbjct: 371 AQFKSADKAKARLVVTIGDSELAEQQVKIKNMATRVEATYPLA 413


>gi|255010901|ref|ZP_05283027.1| histidyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313148708|ref|ZP_07810901.1| histidyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313137475|gb|EFR54835.1| histidyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 454

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 150/481 (31%), Positives = 218/481 (45%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL+ V   L E       
Sbjct: 178 VCIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLENVNKELAEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++ G+  G KG  E   I   ++  
Sbjct: 227 ------GISDEAIAKLQPIILLSGTNAEKLATLKTVLSGSETGLKGVEESEFILNTLQTM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S         R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTQLLFINFGEKEAAFS--MGILAKARA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  ++K    Q+ YA+ +N P   I G  E + G   +K++  G++     + 
Sbjct: 389 AGIRAEIFPDAAK-MKKQMSYANVKNIPFVAIVGENEMNEGKAMLKNMESGEQQMVTAEE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|261868682|ref|YP_003256604.1| histidyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261414014|gb|ACX83385.1| histidyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 425

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 96/476 (20%), Positives = 183/476 (38%), Gaps = 55/476 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   + + +R++ + YG+  I  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTETPLWQWVENKVRSVLQAYGYAEIRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +F+  D D + ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMFTFNDRDDESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+  + A   + +GI  +   + +N+   L+   
Sbjct: 117 PQKGRYRQFHQVGVEIFGIPNPEIDAEIIALTARLWKDLGIF-DHVTLQLNSIGSLEA-- 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            K          +  + +   D   +     +++L  + +                    
Sbjct: 174 RKNYRQALVAFLQNHLDILDEDSKRRLTTNPLRILDSKDQRVQQ---------VLNDAPK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +L  +  +   +L  L+       +   +L                       VRGL
Sbjct: 225 LHDYLDEESREHFAQLCALLDNLGITYEINQKL-----------------------VRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 262 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATSGVGFAMGLERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +            V I  +     +        + LR+    +R  +   S  NF
Sbjct: 314 LLVQEVNKQITLPSA---VDIYIVYPGEGTTVAAFSLAEKLRSELPHLRT-LLHCSGGNF 369

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARVA 472
             Q K AD+    LA++ G  E     + +K+L +  +++   + +  +  +    
Sbjct: 370 KKQFKRADKSGAKLALVIGEDEVKNQQVVVKELLQHSEQVVVALSDITTHIQNTFK 425


>gi|171059548|ref|YP_001791897.1| histidyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170776993|gb|ACB35132.1| histidyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 433

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 103/476 (21%), Positives = 184/476 (38%), Gaps = 55/476 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  +G  D    E         ++R +   YG+  I TP++E +    + L +  D   
Sbjct: 5   LKAVKGMNDLLPPESARWEWFEHTVRALMRRYGYANIRTPIVEPTPLFVRGLGEVTDIVE 64

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++S +D  +G  ++LR + TA + R V E+        R + IGP+FR+E+   GR+R
Sbjct: 65  KEMYSFEDKMNGDALTLRPEGTAGVVRAVVEHSMLYEGGKRLFYIGPMFRHERPQRGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+ +G +    DAE+ +M       +G+                  L  +G   
Sbjct: 125 QFHQVGVEALGFAGPDVDAEVILMARSLWRDLGLTDVRLE------------LNSLGQAD 172

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + + +   ++      LD+   +  + L                    E    ++ FL  
Sbjct: 173 ERRAHRAALIAYFEQHLDELDAEAQRRLHSNPLR-ILDTKNPAMQAIVEAAPQLMDFLGE 231

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              K +  +   +                              +I+  +VRG++YY   V
Sbjct: 232 ASLKHLDAVKAQLDA-----------------------VGQPYRINPRLVRGMDYYNLTV 268

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          +    G++ GGGRYDGL+ +  G+  PA G+ +GI R+I  LK   
Sbjct: 269 FEWVT--------DRLGAQGTICGGGRYDGLIEQIGGKPAPAVGWGLGIERVIELLKESG 320

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNFGNQLKY 423
            +          ++     D+ +L       + LR AGI   M         +  +Q K 
Sbjct: 321 VTAPATSPDAYAVV----PDAAALPIATACAEALRAAGIAVVMHAAGKDGPGSMKSQFKK 376

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAK--GKELSREIKNNESWREARVAQITIP 477
           AD      A++ G  E ++GM+ +K L    G ++ R I +   W      +  +P
Sbjct: 377 ADASGATFALVFGADELAQGMVAVKPLRAGGGAQVLRPIADVALWAAGLQGEAALP 432


>gi|332885958|gb|EGK06202.1| histidyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 452

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 143/476 (30%), Positives = 214/476 (44%), Gaps = 53/476 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+  RN I D+IR +++ YGF  IETP +E   +L GK+  + D  
Sbjct: 3   QPSIPKGTRDFSPEEMAKRNYIFDTIREVFKLYGFRQIETPAMENLSTLMGKYGEEGDKL 62

Query: 65  ---RPNKGVFSLQDDDGQWI---------------SLRYDLTAPLARYVAENFDTIVFPC 106
                N G + L+D   + +                LRYDLT P ARYV  + + I FP 
Sbjct: 63  LFKILNSGDY-LKDLSNEELLEKNSTRLATKISEKGLRYDLTVPFARYVVMHRNEITFPF 121

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  +  +     GI      
Sbjct: 122 KRYQIQPVWRADRPQKGRYREFFQCDADIVGSDSLINEVELIQIADEVFSRFGI---RVS 178

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I +NNRKIL GI E IG            +  AIDKLDK GL+ V   L           
Sbjct: 179 IKLNNRKILSGIAEIIGEAEK-----ITDITVAIDKLDKIGLEKVNEELASKGIPQKAI- 232

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
                   EQ+  ++  L    E+ ++ L  ++K +  G +G NEL  I   ++  G   
Sbjct: 233 --------EQLQPII-LLQGTNEEKLNTLKTVLKDSETGIQGVNELEYILNKLKIVGMR- 282

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             +++  T+ RGL YYTG + E          K   V  GS+ GGGRYD L   F    V
Sbjct: 283 CELELDLTLARGLNYYTGAIIEV---------KALDVQIGSITGGGRYDNLTGIFGLSGV 333

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
              G S G  R+   L  L+    +  +   VL        +  +        +R  GI 
Sbjct: 334 SGVGISFGADRIFDVLNQLDLYPKDSIQNTQVLFVNFGEKEE--AHILPLILKMRQTGIS 391

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            E+F  ++K    Q+ YAD    P   I G  E +   + +KD+  G++ S  ++ 
Sbjct: 392 TEIFPEAAK-MKKQMSYADSNKIPYVAIVGENEINEHKITLKDMTSGEQKSLSLEE 446


>gi|220935216|ref|YP_002514115.1| Histidine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782353|sp|B8GTN4|SYH_THISH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|219996526|gb|ACL73128.1| Histidine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 424

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 102/492 (20%), Positives = 182/492 (36%), Gaps = 72/492 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +      +  + R +   YG++ I  P++E ++   + +
Sbjct: 1   MSK----TLQSIRGMHDVLPADTPAWQWLEAAARELLAGYGYEEIRMPIVEQTELFARSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLHNQQQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+ ++ A     +G+K     I            
Sbjct: 117 PQKGRYRQFHQIGVETFGMDGPDIDAELIILTARLWRVLGLKDVRLEINSLGSTEARAAY 176

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             + +   +   E L      D   +     +++L  +                      
Sbjct: 177 RALLVQHFEAHAEVLD----EDARRRLHSNPLRILDSKNPAMREVIR---------SAPS 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++  L          L  L+                               ++  +VRGL
Sbjct: 224 LLDHLDEASRAHFEGLKALLTAA-----------------------GIEFTVNPALVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E I         +     G+V  GGRYDGLV +  G+  PA GF++G+ RL+
Sbjct: 261 DYYCRTVFEWIT--------ESLGAQGTVCAGGRYDGLVEQLGGRATPAAGFAMGLERLL 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
             +++  +     K    + +        + ++     + LR A  G+R  +  G    F
Sbjct: 313 ALVEAGGARPPAPKPHAYLALA----GEGTQAEGLRLAESLRDALPGLRLVVN-GGGGGF 367

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q+K ADR    LA+I G  E + G + +K L                 EA   Q  +P
Sbjct: 368 KAQIKRADRSGADLALIIGESELAEGTILVKPLR----------------EAGGEQQAVP 411

Query: 478 ISELVSTVKKIL 489
              L   ++  +
Sbjct: 412 RDGLAEFLRARI 423


>gi|116333382|ref|YP_794909.1| histidyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269931|sp|Q03SE4|SYH_LACBA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116098729|gb|ABJ63878.1| histidyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 431

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 99/478 (20%), Positives = 181/478 (37%), Gaps = 65/478 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G AD    + +    +  + R ++ NY F+ I TP+ E  +   +   D  D 
Sbjct: 1   MRYQRPKGTADILPGDSQTWQFVEATARQLFANYRFEEIRTPMFENFEVFSRTSGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++  +D   + +SLR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFKDKGDRHLSLRPEGTAGVVRAFVENKLYGPETQKPYKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKI 174
           GR RQF Q  V+  GS A   D E+  +  + L  +G+           D       R+ 
Sbjct: 121 GRQRQFHQIGVEAFGSDAPELDVEVIALGMNLLGKLGLTHLRLAVNTLGDQETRTAYRQA 180

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   LE       +            D   +     +++L  + + D             
Sbjct: 181 LIDFLEPHFDELSE------------DSKVRLHKNPLRVLDSKDKHDQE---------LV 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ FL+         +   +                               + +T
Sbjct: 220 ADAPSILDFLTPTATAHFDRVKASLDALGID-----------------------YDVDAT 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   ++E +   P + E    V       GGRY+GLV    G  +P  GF +G
Sbjct: 257 MVRGLDYYNHTIFEIMADSPALGEGYTTV-----LAGGRYNGLVEELGGPEMPGVGFGLG 311

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL++ +++ + +  +   +    +  +     +        Q +R +G+ A+      
Sbjct: 312 VERLVLLMQAEQVAIPDNHPLD---VYVVGIGDQTSLATLKIVQAIRQSGLTADRDY-LD 367

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +    Q K A+R N    +  G  E +     +K +A G+E+S  + +     +  VA
Sbjct: 368 RKPKAQFKTANRLNAAYTLTIGEQELADHTANLKSMATGEEISVPLADIYQDFQNVVA 425


>gi|183599737|ref|ZP_02961230.1| hypothetical protein PROSTU_03241 [Providencia stuartii ATCC 25827]
 gi|188021997|gb|EDU60037.1| hypothetical protein PROSTU_03241 [Providencia stuartii ATCC 25827]
          Length = 430

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 103/478 (21%), Positives = 189/478 (39%), Gaps = 68/478 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    + R+  +I   ++NI + Y F  I TP++E++    + +
Sbjct: 1   MAKN----IQAVRGMNDYLPADTRVWQKIEAVLKNILQGYSFSEIRTPIVEHTPLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQ-----WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            +  D   K +++  D          ++LR + TA   R   E+        R + +GP+
Sbjct: 57  GEVTDVVEKEMYTFIDRHDTDKAEVSLTLRPENTAGCVRAGIEHGLLYNQEQRLWYLGPM 116

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGI 169
           FR+E+   GR+RQF Q   +  G +    DAE+ MM A    A+GI  +     +    +
Sbjct: 117 FRHERPQKGRYRQFHQLGAEVFGLAGPDIDAELIMMTARWWRALGISEHVTLELNSIGSL 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           + R      L        +KL+E        D   +     +++L  + +          
Sbjct: 177 DARANYREALVAFLEQHKEKLDE--------DCKRRMYTNPLRVLDSKNQ---------D 219

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +  +L  +  +    L +L+                            + 
Sbjct: 220 VQALLNDAPELFDYLDDESREHFDGLCKLLDAA-----------------------GIQY 256

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA 
Sbjct: 257 RVNQRLVRGLDYYNRTVFEWVTTA--------LGSQGTVCAGGRYDGLVGQLGGKPTPAV 308

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++G+ R+++ ++SL      I +     +       +S     +  + +R A   +R 
Sbjct: 309 GFAMGMERMVLLVESLN--PGFIADESVTDVYLASFGENSQKSALLLAEQVRDALPSLRV 366

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
               G   NF  QL  AD++   +A+I G  E +   + +KDL  G++ +   +    
Sbjct: 367 MTNHGGG-NFKKQLARADKQGAKVALILGEEEIANHQVGVKDLRTGEQETVSQQQLAQ 423


>gi|156386252|ref|XP_001633827.1| predicted protein [Nematostella vectensis]
 gi|156220902|gb|EDO41764.1| predicted protein [Nematostella vectensis]
          Length = 519

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 118/479 (24%), Positives = 210/479 (43%), Gaps = 30/479 (6%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K  K   + P+G  D   K++ +R R  + I   +E +G   I+TP+ E  ++L     +
Sbjct: 60  KTQKFVLKTPKGTRDYMPKQMAVRQRAFEVIVGAFERHGAVQIDTPVFELKETLTGKYGE 119

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +   +K ++ L D  G+ +SLRYDLT P ARYVA N    +             N     
Sbjct: 120 D---SKLIYDLADQGGEMLSLRYDLTVPFARYVAMNKIDKIKRYHIA-KVYRRDNPAMTR 175

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+R+F QCD+D  G          C+ +   + A  ++  D+ I +N+R++LDG+    
Sbjct: 176 GRYREFYQCDIDIAGQYDAMIPDAECVKIVAEILA-DLELGDFKIKVNHRRLLDGMFAVC 234

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+       +   +  A+DKLDK   + V+  + +              L     D +  
Sbjct: 235 GVPE----GKFRTICSAVDKLDKATWEEVRKEMVDE-----------KGLEGSAADRIGE 279

Query: 243 FLSIDLEKSMHELYE---LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +    ++ E       +      ++   ++ ++ +          ++    ++ RGL
Sbjct: 280 YVKLSGGMNLVERLAQDGELMKNKNAKEALEDMELLLQYCELFNVTE-KVLFDLSLARGL 338

Query: 300 EYYTGCVYEAILGFP----VMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSI 353
           +YYTG +YEAIL          EK +PV  GSV GGGRYD LV  F    + VP  G SI
Sbjct: 339 DYYTGVIYEAILTGKLPDLGKAEKGEPVGVGSVAGGGRYDNLVGMFDPKGRKVPCVGVSI 398

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI R+   L++   +++         +       + L         L  AG++AE+    
Sbjct: 399 GIERIFSILEAKSEASDKKMRTNKTQVLVASGQKNMLQHRLKLASELWEAGVKAEVLYKK 458

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +    NQ ++ +    PL ++ G  E   G++ ++D+   +E+S +  +     + R+ 
Sbjct: 459 NPKMLNQFQFCEEGGVPLCLVIGEKELEEGIVTLRDMESREEVSVKRADVCDIIKKRLQ 517


>gi|258515495|ref|YP_003191717.1| histidyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779200|gb|ACV63094.1| histidyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 419

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 100/466 (21%), Positives = 177/466 (37%), Gaps = 52/466 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    PRG  D    E+     I   I+ +   YGF  + TP+ E++D   + + +  D 
Sbjct: 1   MLTTRPRGTNDILPGEVEKWQYIESVIKQLCHEYGFAELRTPVFEHTDLFIRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + I+LR + TA   R   EN       P + Y  GP+FR ++   GR
Sbjct: 61  VEKEMYTFTDRGERSITLRPEGTASAVRAYLENKLYAGVQPVKLYYTGPMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKIG 183
           FRQF Q  V+  GS     DAE+  M  D    +G+K  +  I          +L EK+ 
Sbjct: 121 FRQFHQFGVEVFGSDEPAVDAEVIAMAMDFYTRLGLKDLELRINSVGCPDCRPVLREKLQ 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                KLNE            ++    +++L  +           G  L      + +  
Sbjct: 181 AFFKPKLNELCANC-----QGRYNRNPLRILDCKN---------TGCRLLGAGAPVTLDC 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +  K    + + +                               + S++VRGL+YYT
Sbjct: 227 LCENCAKHFSLVKKYLS-----------------------LLDISFTVDSSLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                S+GGGGRY+GL+    G   P  G+++G+ R+++  +
Sbjct: 264 HTAFEVMARD--------IGAQSSIGGGGRYNGLIEECGGAPAPGIGYAVGLERVLLIAE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +      + +          LR  G+ A+      ++   Q+K+
Sbjct: 316 KQGIV---FPAALGPEVFVAAAGAGTEETAFKVLFNLRRTGLSADKDY-LGRSLKAQMKH 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           A +      +I G  E + G+L +KD+  GK+    ++    + + 
Sbjct: 372 AGKLAARFTVIIGESELAEGLLLVKDMLAGKQEKVPVQAVAEYIKN 417


>gi|229496633|ref|ZP_04390347.1| histidyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316530|gb|EEN82449.1| histidyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 456

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 142/492 (28%), Positives = 229/492 (46%), Gaps = 60/492 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKF 59
           M K       +P+G  D  + E++ RN I ++I ++Y  YG+  IETP LE   +L GK+
Sbjct: 1   MNK-----PSIPKGTRDFSSLEMQRRNYIFNTIGDVYRLYGYKQIETPALELLSTLMGKY 55

Query: 60  LPDEDR-----PNKGVF----SLQDDDGQWI----------SLRYDLTAPLARYVAENFD 100
             + DR      N G F    + QD D + +           LRYDLT P AR+V ++ +
Sbjct: 56  GEEGDRLLFKVLNSGDFLSDVTQQDFDEKNLPHIANKLSEKGLRYDLTVPFARFVVQHRN 115

Query: 101 TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
            I FP + ++I PV+R ++   GR+R+F QCD D VG+ +   + E+ +++ +    +GI
Sbjct: 116 EITFPFKRFQIQPVWRADRPQKGRYREFYQCDADVVGTDSLLCEIELILIINEVFSRLGI 175

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
                 + +NNRKIL GI E +G+   D+L E  I +   D               +   
Sbjct: 176 A---TRLHLNNRKILAGIAEVVGVP--DQLTELTIAMDKCD---------------KIGL 215

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISEL 278
           D   +  +    + + I  +  FL ++ E  + +  L  L+  +  G KG  EL  I E 
Sbjct: 216 DGVMEELRAKGFSDDTIQRLQPFLHLEGENGERLEALATLLASSEIGCKGVEELSFIFEG 275

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
           +  S + +  I    ++ RGL YYTG + E          K K V  GS+ GGGRYD L 
Sbjct: 276 L-ASQHLTTEILFDPSLARGLGYYTGAILEV---------KAKDVAIGSITGGGRYDNLT 325

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           S F    +   G S G  R+   L  L++          VLI     +   + +     Q
Sbjct: 326 SIFGLDGMSGVGISFGADRIYDVLLQLDAFPTTTNTSTQVLIINFGKEE--VQQMLPIVQ 383

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            LR  GI  E++  ++K    Q+ YAD    P  I+ G+ E  +G+  +KD+A+G + + 
Sbjct: 384 KLRADGISVEIYPDAAK-LKKQMSYADSLAIPYVILAGSEELKQGIFTLKDMAEGSQETL 442

Query: 459 EIKNNESWREAR 470
             +    +  ++
Sbjct: 443 SQEQLTHFFTSK 454


>gi|53719148|ref|YP_108134.1| histidyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126453409|ref|YP_001066491.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167719270|ref|ZP_02402506.1| histidyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167738266|ref|ZP_02411040.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167815456|ref|ZP_02447136.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167845407|ref|ZP_02470915.1| histidyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167902398|ref|ZP_02489603.1| histidyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|242314906|ref|ZP_04813922.1| histidine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254179552|ref|ZP_04886151.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|81690387|sp|Q63UT2|SYH_BURPS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227951|sp|A3NVX0|SYH_BURP0 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|52209562|emb|CAH35515.1| histidyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126227051|gb|ABN90591.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|184210092|gb|EDU07135.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|242138145|gb|EES24547.1| histidine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 446

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 104/499 (20%), Positives = 199/499 (39%), Gaps = 66/499 (13%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + +
Sbjct: 5   KRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ ++LR + TA + R   E+      P R + +GP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         G+ E
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSL------GLAE 178

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +   H  + +      +  +D   +  L    L + + +     +  + A         +
Sbjct: 179 ERAAHRVELIKYLEQHVDKLDDDAQRRLYTNPLRVLDTKNPALQEIVRNA-------PQL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL          L  L+K                              I+  +VRGL+
Sbjct: 232 IDFLGDVSRAHFDGLQRLLKANNL-----------------------PFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++G+ R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNF 417
            LK          E   V +  +     +  +  +  + LR  G+   +     G+  +F
Sbjct: 321 LLKEEHLVP----EQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQITI 476
            +Q+K AD      A+I G  E + G + +K L   G E  + +            Q ++
Sbjct: 377 KSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRGTGAEGEKNV------------QQSV 424

Query: 477 PISELVSTVKKILQENKEE 495
           P+  L   +   +    E+
Sbjct: 425 PVESLTEFLINAMVATAED 443


>gi|281345420|gb|EFB21004.1| hypothetical protein PANDA_000361 [Ailuropoda melanoleuca]
          Length = 453

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 123/461 (26%), Positives = 210/461 (45%), Gaps = 31/461 (6%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+    + P+G  D   +++ +R +ILD +   ++ +G   ++TP  E  + L +   ++
Sbjct: 17  KSNFIIKTPKGTRDLSPQQMVVREKILDLVIGCFKRHGAKRLDTPAFELKEMLTEKYGED 76

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +  ++ L+D  G+ +SLRYDLT P ARY+A N    V   + Y +G V+R E     
Sbjct: 77  ---SGLIYDLKDQGGELLSLRYDLTVPFARYLAMNK---VKKMKRYHVGKVWRRESPTIV 130

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G        +   +        G++  D+ I +N+R+ILDG+L  
Sbjct: 131 QGRYREFCQCDFDIAGQFD-PMIPDAECLKIMCEILSGLQLGDFLIKVNDRRILDGMLAV 189

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  +IDKLDK     V+            +      L  E  D + 
Sbjct: 190 CGVPES----KFHAICSSIDKLDKISWNDVR-----------HEMVARKGLAPEVADRIG 234

Query: 242 SFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E      ++       +G  +L ++ E +   G    +I    ++ RG
Sbjct: 235 DYIQCHGGVSLVEEMFQDSILSQNKQAIEGLGDLKLLFEYLTLFGIAE-KISFDLSLARG 293

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGIS 356
           L+YYTG +YEA+L       ++     GSV  GGRYDGLV  F      VP  GFSIG+ 
Sbjct: 294 LDYYTGVIYEAVLLQTPAQAEESL-NVGSVAAGGRYDGLVGMFDPKGHKVPCVGFSIGVE 352

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    ++          +       + L +       L  AGI+AE+   ++  
Sbjct: 353 RIFAIVEQRMKTSGQKIRTTETQVFVATPQKNFLHERLKLISELWDAGIKAELLYKNNPK 412

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
              QL Y +    PLA+I G  E   G+++++ +A  +E+S
Sbjct: 413 LLTQLHYCEHMGIPLAVIIGEQELKEGVIKLRSVASREEVS 453


>gi|253565206|ref|ZP_04842662.1| histidyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251946671|gb|EES87048.1| histidyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 454

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 149/481 (30%), Positives = 216/481 (44%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNKELAEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++  +  G KG  E   I   ++  
Sbjct: 227 ------GISEEAIAKLQPIILLSGTNAEKLATLKTVLSDSETGLKGVEESEFILNTLQTM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S         R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTQLLFINFGEKEAAFS--MGILSKARA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  ++K    Q+ YA+ +N P   I G  E + G   +K++  G++     + 
Sbjct: 389 AGIRAEIFPDAAK-MKKQMSYANVKNIPFVAIVGENEMNEGKAMLKNMESGEQQLVTAEE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|332140450|ref|YP_004426188.1| histidyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|332141963|ref|YP_004427701.1| histidyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|229558638|sp|B4RV88|SYH_ALTMD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|327550472|gb|AEA97190.1| histidyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551985|gb|AEA98703.1| histidyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 427

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 110/504 (21%), Positives = 191/504 (37%), Gaps = 89/504 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC  +      ++   +R +  +YG+  I TP++E +D   + +
Sbjct: 1   MAK----TIQAIRGMNDCLPEISGTWQKVESVLRQVVASYGYQEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASCVRAGNEHGLLYNQQQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G      D E+ ++ A   ++ GI++                 
Sbjct: 117 PQKGRYRQFHQFGVETYGMDGPDIDLEVILLSARFWKSFGIEQHVKLQINTLGSNEARAA 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   L++     D+            D L +     +++L  +             
Sbjct: 177 YRDTLVAFLKERADQLDE------------DSLRRLETNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    ++  L  + +     L   +                              +
Sbjct: 216 QAAIADAPALIDHLDDESKAHFDTLCARLT-----------------------QAGIEFE 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 253 INPRLVRGLDYYNRTVFEWVT--------DSLGAQGTVCAGGRYDGLVEQLGGKATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++GI RL++    L + T   ++     +       D+       ++ LR A   IR  
Sbjct: 305 FAMGIERLVL---LLTTLTEEGQDTSFADVYVTAMGDDAQPYAIEVSEALRNALPNIRIM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M  G   NF  QLK AD+    LA++ G+ E     + +K L  G+E             
Sbjct: 362 MHCGGG-NFKKQLKRADKTGARLALLLGSDEMQSREVGVKPLRDGQE------------- 407

Query: 469 ARVAQITIPISELVSTVKKILQEN 492
               Q+T+    L   V ++L   
Sbjct: 408 ----QVTVSFDTLADKVAEMLSAK 427


>gi|262382355|ref|ZP_06075492.1| histidyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262295233|gb|EEY83164.1| histidyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 451

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 142/483 (29%), Positives = 216/483 (44%), Gaps = 61/483 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I ++IR ++  YGF  IETP +E   +L GK+  + D  
Sbjct: 3   KPSIPKGTRDFSPEEMAKRNYIFNTIREVFHLYGFQQIETPAMENLSTLMGKYGEEGD-- 60

Query: 67  NKGVFS-------LQDDDGQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F              + +                LRYDLT P ARYV ++ + I F
Sbjct: 61  -KLLFKILNSGDCFTGISDEELMEKNPLRFAAKACEKGLRYDLTVPFARYVVQHRNEISF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  +M +     GI    
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDGDVVGSDSLINEVELIQIMDEVFHRFGI---R 176

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L         
Sbjct: 177 VCIKMNNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNEEL--------- 222

Query: 225 DFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
              +   L  E I+ +     L    ++ +  L E++  +  G KG  EL  I E +   
Sbjct: 223 ---RSKGLPEEAIERLQPIIMLQGSNQEKIATLKEVLSASETGLKGVAELDFILERIS-H 278

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
                 +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 279 TPIRAELELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            + V   GFS G  R+   L  L+       +   +L        +           +R 
Sbjct: 330 MEGVSGVGFSFGADRIFDVLNQLDLYPEGSLKTTQLLFVNFGQKEEI--HLLPLIAKVRK 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIR E++  S+K    Q+ YAD +  P   I G  E +   + +K++  G++    I+ 
Sbjct: 388 AGIRTELYPESTK-MKKQMGYADAKKIPFVAIVGENEMAENKINLKNMLTGEQTLVTIEE 446

Query: 463 NES 465
              
Sbjct: 447 LIE 449


>gi|255530089|ref|YP_003090461.1| histidyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255343073|gb|ACU02399.1| histidyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 462

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 142/493 (28%), Positives = 234/493 (47%), Gaps = 63/493 (12%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDE 63
           + ++  L +G  D   +E+  RN I D+++ +++ YG+  I+TP +E   +L GK+  + 
Sbjct: 2   SNIKPSLAKGTRDFSPQEMVKRNFIFDTVKTVFKKYGYAEIQTPSMENLSTLTGKYGDEG 61

Query: 64  DRPNKGVFSLQDDDG----------------------QWISLRYDLTAPLARYVAENFDT 101
           D   K +F + +                            +LRYDLT P ARYV  + + 
Sbjct: 62  D---KLIFKILNSGDYLAKVKPDLLTNANSNAILPSISEKALRYDLTVPFARYVVMHQND 118

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
           I  P + +++ PV+R ++   GR+R+F QCDVD VGS +   +AE  ++  + L  +G+K
Sbjct: 119 ISLPFKRFQVQPVWRADRPQKGRYREFYQCDVDVVGSDSLLNEAEFILIYQEALTGLGLK 178

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
             ++ I INNRKIL GI E +G          + +  AIDKLDK GL GV   L E    
Sbjct: 179 --NFTIKINNRKILSGIAEVVGKPE-----LIIDMTVAIDKLDKIGLDGVVKELLER--- 228

Query: 222 NSGDFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE-- 277
                      T   I+ +     L     + +  L +++  + AG KG  E+  + +  
Sbjct: 229 ---------GFTDADIERLKPVILLQGSNTEKLESLKKVLSASAAGLKGIEEIETVFDYV 279

Query: 278 --LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             +++        +++  T+ RGL YYTGC++E          K   V  GS+GGGGRYD
Sbjct: 280 NSMLKAEPAIKPDVELDITLARGLNYYTGCIFEV---------KTNEVAMGSIGGGGRYD 330

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            L   F  + +   G S G  R+   L+ L     +      VLI+  D +++       
Sbjct: 331 DLTGMFGLKGLTGVGVSFGADRIYDVLQELNLFPESTVAGTKVLISNFDKEAE--EYALP 388

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             Q LR+A I AE++  S+K    Q+ YAD ++ P  ++ G+ E   GML +KD+  G++
Sbjct: 389 VLQQLRSANIAAELYPSSAK-LKKQMSYADDKHIPYVMLIGSDEMESGMLTLKDMQSGQQ 447

Query: 456 LSREIKNNESWRE 468
                ++     +
Sbjct: 448 QKLTAESIVELLK 460


>gi|311739543|ref|ZP_07713378.1| histidine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311305359|gb|EFQ81427.1| histidine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 429

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 100/483 (20%), Positives = 190/483 (39%), Gaps = 68/483 (14%)

Query: 1   MGKKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M KK + +A   P+G  D    +     ++  ++       GF  IE P+ E +    + 
Sbjct: 1   MSKKKQFQALSAPKGVPDYFPPQSAAFYKVRQTMVEQAHLSGFQHIELPIFEDTALFARG 60

Query: 60  LPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRN 117
           + +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR 
Sbjct: 61  VGESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRSVIEHNLDRGQLPVKLNYFGPFFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGI 169
           E+   GR+RQ  Q  V+ +G      DAE+  +   +  A+G            D +   
Sbjct: 121 ERPQAGRYRQLQQVGVEAIGVDDPALDAEVIALADRSFRALGLSGFRLELTSLGDRNCRP 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L K+ L  + +    +  LR +D                       +    
Sbjct: 181 AYREKLQEFLFKLDLDEETRHRAEINPLRVLDDK----------------RPEVQEQLAD 224

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L  + ++                           ++  +    ++ ++   G      
Sbjct: 225 APLMLDHLN---------------------------DECRDHFETVTGMLDDMG---VAY 254

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   
Sbjct: 255 EINPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLSGI 306

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G+ +G+ R ++AL++   + + ++    V +  +   + +          LR AGI A+M
Sbjct: 307 GYGLGVDRALLALEAEGITLDGVES--RVDVFGVALGAAAKRTMTTLINDLRKAGISADM 364

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             G  +     +K ADR     A++ G  E   G + +KDLA  ++   ++ +  S    
Sbjct: 365 SFG-DRGLKGAMKGADRAGARFALVLGEQELENGTVALKDLAAHEQHDVKVSDLVSVLAR 423

Query: 470 RVA 472
            + 
Sbjct: 424 EIN 426


>gi|237785608|ref|YP_002906313.1| histidyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|259511941|sp|C4LIW5|SYH_CORK4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|237758520|gb|ACR17770.1| Histidyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 426

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 103/502 (20%), Positives = 200/502 (39%), Gaps = 87/502 (17%)

Query: 1   MGKKTKL-RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M   +K  +   P+G  D         N +  +  +     G++P+E P+ E +    + 
Sbjct: 1   MSTSSKPRKFTAPKGVPDYVPPNSHEFNAVRSTFHHCATVAGYEPVELPIFEDTSLFARG 60

Query: 60  LPDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRN 117
           + +  D   K +++ +D  G+ ++LR + TA + R V E+       P +    GP FR 
Sbjct: 61  VGESSDVVTKEMYTFEDRGGRSMTLRPEGTAGVMRAVIEHGLDRGQLPAKLVYAGPCFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGI 169
           E+   GR+RQF Q  V+ +G      DAE+  +      ++G+           D     
Sbjct: 121 ERPQAGRYRQFQQVGVEAIGVDDPALDAEVIALAYRCFTSLGLMGFRLELTSLGDSTCRP 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L  + L  + +   ++  LR +D         VK +  +            
Sbjct: 181 AYREKLQAFLTSLPLDEETQHRAQINPLRVLDDKRP----EVKEMTAD------------ 224

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                    +M+ +LS +       +  ++                          S   
Sbjct: 225 -------APLMLDYLSDEARAHFETVTGILDDL-----------------------SVPY 254

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YYT   +E +                 +GGGGRYDGL++   G+++   
Sbjct: 255 TINPRMVRGLDYYTKTCFEFV--------HDDLGAQSGIGGGGRYDGLMAELGGRDLSGV 306

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF +G+ R ++AL++ + +  +      V +  +    ++  +  +    LR +G+RA+M
Sbjct: 307 GFGLGVERALLALETEKKTVTDGSR---VEVYGVAMGEEAHRRMPVIINDLRQSGVRADM 363

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             G  +     +K ADR     A++ G  E ++ ++Q+KDL +G++ +            
Sbjct: 364 SYG-HRGLKGSMKAADRAGARFALVIGEDELAKSIVQVKDLHEGEQTA------------ 410

Query: 470 RVAQITIPISELVSTVKKILQE 491
                 +P+ ++V  V+  L  
Sbjct: 411 ------VPLDQVVQEVRGRLSA 426


>gi|242770169|ref|XP_002341923.1| histidyl-tRNA synthetase, mitochondrial precursor [Talaromyces
           stipitatus ATCC 10500]
 gi|218725119|gb|EED24536.1| histidyl-tRNA synthetase, mitochondrial precursor [Talaromyces
           stipitatus ATCC 10500]
          Length = 605

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 127/541 (23%), Positives = 213/541 (39%), Gaps = 79/541 (14%)

Query: 1   MGKKT----KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           MGK          + P+G  D    +  IR+RI  +I N++  +G   ++TP+ E  + L
Sbjct: 64  MGKDKDNKVTFNLKTPKGTRDWAGADTLIRDRIFSTITNVFRRHGGTALDTPVFELREIL 123

Query: 57  GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
                ++   +K ++ LQD  G+  SLRYDLT P AR++A N    +   + Y I  V+R
Sbjct: 124 AGKYGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMN--PEIRSIKRYHIAKVYR 178

Query: 117 NEKH----GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            ++     G  R       D+          DAE+  ++ +  E +G  +  + I IN+R
Sbjct: 179 RDQPAVAKGRMREFYQCDFDIAGANFDPMVPDAEVLKVINEVFEDLG-WQGKFTIKINHR 237

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+LDG+ E  G+  D    +   +  A+DKLDK     V+  + E              L
Sbjct: 238 KVLDGMFEVCGVPQD----KIRPISSAVDKLDKLPWADVRKEMVE-----------DKGL 282

Query: 233 TSEQIDIMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
            +   D +  ++S    K + E     E +    A ++G  E+ ++ + +   G   + I
Sbjct: 283 DAAAADKIEKYVSRKGRKDLLEELLKDEDLMANAAAKQGIEEMGLLMDYLEAFGVL-DTI 341

Query: 290 KISSTIVRGLEYYTGCVYEAIL----------------------------GFPVMNEKQK 321
               ++ RGL+YYTG +YE +                             G         
Sbjct: 342 SFDLSLARGLDYYTGVIYEVVTEGSAPVTATSAPEAKNLQKSGKKTKSATGDDDDRSNDP 401

Query: 322 PVVFGSVGGGGRYDGLV-SRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVL 379
            V  GS+  GGRYD LV   +    +P  G S G+ R+    K+ +E           V 
Sbjct: 402 TVGVGSIAAGGRYDNLVGMFYPKAQIPCVGISFGVDRIFSITKARMEKEKAAEMRSSEVD 461

Query: 380 ITTMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
           +  M          L +     + L  AG++AE           Q K A+    P  +I 
Sbjct: 462 VYVMAFGGKGFTGMLKERMEICKTLWAAGVKAEFSYKLKPKLPQQFKAAETSGIPFGVIL 521

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           G  E + G ++IK++                       +++ I  LV  +KK +    + 
Sbjct: 522 GEDELAAGQVKIKEM------------GLPEGHPEKEGVSVDIKNLVEEIKKRISNKNKG 569

Query: 496 I 496
           I
Sbjct: 570 I 570


>gi|307729250|ref|YP_003906474.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583785|gb|ADN57183.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 446

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 98/498 (19%), Positives = 194/498 (38%), Gaps = 64/498 (12%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK   +    +G  D   ++  + +    +++++  +YG+  I TP++E++    + + +
Sbjct: 5   KKKLDKLSGVKGMNDILPQDAGLWDFFETTVKSMLRSYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ ++LR + TA + R   E+      P R + IGP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFTDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I             
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAQERAAHR 184

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +   +K  + L      D   +     +++L  +                ++    +
Sbjct: 185 VELIAYLEKHMDVLD----EDAKRRLYTNPLRVLDTKN---------PALQEVAQNAPKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +       L  ++K                         +    I+  +VRGL+
Sbjct: 232 IDFLGEESRAHFEGLQRILKAN-----------------------NIPFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKATAACGWAMGIERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NF 417
            LK  +       E     +  +     +  +  +  + LR  G+   +   +     +F
Sbjct: 321 LLKEEQLVP----EDEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSADGQSASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q+K AD      A++ G  E + G + +K L              +    +  Q  +P
Sbjct: 377 KSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD-----------TNANGGKNEQHNVP 425

Query: 478 ISELVSTVKKILQENKEE 495
             +L   +   +    E+
Sbjct: 426 AEDLTEFLINAMVATAED 443


>gi|312867053|ref|ZP_07727264.1| histidine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097535|gb|EFQ55768.1| histidine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 427

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 102/475 (21%), Positives = 181/475 (38%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R ++  Y +D I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDSAKWQYVEGFARKVFARYNYDEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y IGP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYIGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR RQF Q  V+  GSS    D E   M A  L+ +GI     H+       +R+     
Sbjct: 121 GRLRQFHQIGVECFGSSNPATDVETIAMAAQFLKELGIDNVTLHLNTLGSPASRQAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L    L   D+L++        D   +     +++L  + + D +           EQ  
Sbjct: 181 LIDYLLPVKDQLSK--------DSQRRLEENPLRVLDSKEKEDKA---------AVEQAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +     +  +++                              I + +VRG
Sbjct: 224 SILDYLDEESQAHFDAVRRMLEDLGVA-----------------------YVIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I         +      +V  GGRYDGLV  F G      GF IG+ R+
Sbjct: 261 LDYYNHTIFEFIT--------EIEGNELTVCAGGRYDGLVEYFGGPATAGFGFGIGVERI 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+        +     +         +         Q LR  G +AE      +   
Sbjct: 313 LLVLEKKGI---ELPIETGLDAYIAVLGDEVNEAALSLVQALRIQGFKAERDY-LGRKLK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD       I  G+ E   G + +K+    +E++  ++  +    + +A+
Sbjct: 369 AQFKSADVFAAKALITLGSSEVESGQVTVKNNQTRQEVTVALEKLKKDFPSVLAE 423


>gi|332522579|ref|ZP_08398831.1| histidine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332313843|gb|EGJ26828.1| histidine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 425

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 98/461 (21%), Positives = 174/461 (37%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      +    R  +E Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPEEAAKWQYVEAVARETFEKYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGERHITLRPEGTAPVVRSFVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+   +D E   M     E +GIK    HI             + 
Sbjct: 121 GRLREFHQIGVECFGSANPASDVETIAMANHLFETLGIKDITLHINSLGNPTSRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + E+L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPMREQL----SKDSQRRLDENPLRVLDSKEKEDK---------IAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     +  ++                               I + +VRGL+YY
Sbjct: 228 YLDDESQAHFETVKAMLADLE-----------------------IPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E +                ++  GGRYDGLVS F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFMATVDNSE--------LTICAGGRYDGLVSYFNGPETPGFGFGLGLERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +   +  M    +        + SK     Q LR  G + E      +    Q K
Sbjct: 317 EKQGITLPVVPGMD---VYVAVLGDRANSKALALVQSLRRQGFKVERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD     + +  G  E   G + +K+    +E+    +  
Sbjct: 373 SADSFKAKVIMTLGESEVEAGKVTLKNNQSRQEIEASFEEI 413


>gi|298373550|ref|ZP_06983539.1| histidine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274602|gb|EFI16154.1| histidine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 453

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 142/486 (29%), Positives = 221/486 (45%), Gaps = 61/486 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEY-SDSLGKFLPDEDRP 66
           +  +P+G  D    E+  RN I D+IR  +  +GF  IETP +E  S  LGK+  + D  
Sbjct: 3   KPSIPKGTRDFLPVEMERRNYIFDTIREAFRKFGFLQIETPAMENISTLLGKYGDEGD-- 60

Query: 67  NKGVFSLQDDDG---------------QWIS-------LRYDLTAPLARYVAENFDTIVF 104
            K +F + +                  + ++       LRYDLT P AR+V ++ D I F
Sbjct: 61  -KLLFRILNSGNFLDGVSTAEQDVSNVRELTLKIAEKGLRYDLTVPFARFVVQHRDAITF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P R Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++ D    +GI   +
Sbjct: 120 PFRRYQIQPVWRADRPQRGRYREFYQCDADIVGSDSLLNEVELIELIDDVFGRLGI---N 176

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++   +  AIDKLDK GL  V   L E       
Sbjct: 177 VSIKINNRKILAGIAELIG-----EADKITDITVAIDKLDKIGLDNVNKELEEK------ 225

Query: 225 DFTKGANLTSEQIDIM--VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I+++  +  L  D  + + +L  ++  +  G+KG  E   I   +   
Sbjct: 226 ------GISPESIELLQPILMLGGDNGEKLDKLRHILTASTMGQKGIEETETILSYL-AD 278

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
              +  +++  T+ RGL YYTG + E          K + V  GS+ GGGRYD L   F 
Sbjct: 279 CRLAASLELDLTLARGLNYYTGAIIEV---------KARDVQIGSISGGGRYDNLTGVFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            Q V   G S G  R+   L +L     +      +L      D +         + +R 
Sbjct: 330 LQGVSGVGVSFGADRIYDVLDTLGLFPTHSAAATQILFAVF--DEEGRKYSLPIVRSIRR 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            GI AE++  ++K    Q++YA+ +  P   I G  E     + +K++  G++    I N
Sbjct: 388 KGIAAELYPDNAK-IKKQMQYANDKRIPFVAIVGDEEIKSHSVMLKNMETGEQKLVSIDN 446

Query: 463 NESWRE 468
                 
Sbjct: 447 IVQEIR 452


>gi|256839200|ref|ZP_05544710.1| histidyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256740119|gb|EEU53443.1| histidyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 451

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 142/483 (29%), Positives = 218/483 (45%), Gaps = 61/483 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I ++IR ++  YGF  IETP +E   +L GK+  + D  
Sbjct: 3   KPSIPKGTRDFSPEEMAKRNYIFNTIREVFHLYGFQQIETPAMENLSTLMGKYGEEGD-- 60

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F + +          + +                LRYDLT P ARYV ++ + I F
Sbjct: 61  -KLLFKILNSGDCFAGISDEELMEKNPLRFAAKACEKGLRYDLTVPFARYVVQHRNEISF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  +M +     GI    
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDGDVVGSDSLINEVELIQIMDEVFHRFGI---R 176

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L         
Sbjct: 177 VCIKMNNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNEEL--------- 222

Query: 225 DFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
              +   L  E I+ +     L    ++ +  L E++  +  G KG  EL  I E +   
Sbjct: 223 ---RSKGLPEEAIERLQPIIMLQGSNQEKIATLKEVLSASETGLKGVAELDFILERIS-H 278

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
                 +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 279 TPIRAELELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            + V   GFS G  R+   L  L+       +   +L        +           +R 
Sbjct: 330 MEGVSGVGFSFGADRIFDVLNQLDLYPEGSLKTTQLLFVNFGQKEEI--YLLPLIAKVRK 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIR E++  S+K    Q+ YAD +  P   I G  E +   + +K++  G++    I+ 
Sbjct: 388 AGIRTELYPESTK-MKKQMGYADAKKIPFVAIVGENEMAENKINLKNMLTGEQTLVTIEE 446

Query: 463 NES 465
              
Sbjct: 447 LIE 449


>gi|251798352|ref|YP_003013083.1| histidyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545978|gb|ACT02997.1| histidyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 416

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 176/468 (37%), Gaps = 58/468 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +   G  D     +          R+I   + F  I TP+ E ++   + + +  D 
Sbjct: 1   MAFQKSPGTQDILPGVVERWQYAEQKARDICRRFNFREIRTPIFEATELFQRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + I+LR + TA + R   EN         + Y IGP+FR E+   GR
Sbjct: 61  VEKEMYTFTDRGDRSITLRPEGTAGVVRSYVENKLYGEPDVSKLYYIGPMFRYERQQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q  ++ +GS     DAE+  +       VG+K     I       +         
Sbjct: 121 YRQFHQFGIEALGSVEPAIDAEVIALGYTFFTEVGLKGVRVEINSVGTPAVRAAFR---- 176

Query: 185 HGDDKLNERLIVLR---AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
              +KL   L+ +R     D   +     +++L  +                 E    ++
Sbjct: 177 ---EKLLAFLMPMREQLCKDCQSRMERNPLRVLDCKTDQARF-----------EAAPSIL 222

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L  +      ++   +                               I+  +VRGL+Y
Sbjct: 223 DSLDEECTTHFEKVKTCLSD-----------------------MGIPFTINPRLVRGLDY 259

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E         + +      ++GGGGRY+GLV+   G + P  G  +G+ R I+ 
Sbjct: 260 YTHTAFE--------YKAEGIGAIDTIGGGGRYNGLVAEIGGPDQPGVGLGLGLERTIML 311

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+  ++    +     V +  +     +  +       LRT+GIRAE      +    Q+
Sbjct: 312 LEHQQA---ELDNAHQVDVYVVALGEAADREVTRLVYELRTSGIRAERDY-LGRKMKAQM 367

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K ADR       I G  E  RG + +K++A G++    + +  S  ++
Sbjct: 368 KSADRLQARYTAILGDDELERGEIALKEMATGEQRVVALASLASELKS 415


>gi|67603065|ref|XP_666521.1| histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Cryptosporidium hominis TU502]
 gi|54657533|gb|EAL36292.1| histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase)
           (HisRS) [Cryptosporidium hominis]
          Length = 528

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 131/493 (26%), Positives = 228/493 (46%), Gaps = 46/493 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R ++P+G  D   +++ I+N +   IR +Y  +G   I+TP+ E  D+L     ++   +
Sbjct: 55  RPKIPKGTQDVTPQKMAIKNLVFGMIREVYRAHGAVEIDTPVFELKDTLLGKYGED---S 111

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRF 125
           K ++ L+D  G+ +SLRYDLT PLARY+A +        + Y+IG V+R ++     GRF
Sbjct: 112 KLIYDLKDQGGEQLSLRYDLTVPLARYIATSGLD---HLKRYQIGKVYRRDEPQMARGRF 168

Query: 126 RQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           R+F QCD+D V    +  AD+E+  +    L +       + I IN+R++LDGILE  G+
Sbjct: 169 REFYQCDLDIVGHYDSMVADSEIIKIATQVLSSFSNWIGQFMIKINHRQLLDGILEISGV 228

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +    +      +IDKLDK   + V+            +      L+   +D + S +
Sbjct: 229 PSE----KFKTTCSSIDKLDKEPWESVR-----------NEMINIKGLSESSVDKIGSII 273

Query: 245 SIDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            +        + +    E+++      K   EL  + +  +      N +    ++ RGL
Sbjct: 274 QLKGTPFDVLEKIKSNQEMMENKNIM-KALEELETLFKYTKSCNNCINYLSFDLSLARGL 332

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG +YEA+L    +N        GS+  GGRYD L+  F  +N+PA GFS+G+ R++
Sbjct: 333 DYYTGVIYEAVLISNELN-------VGSIAAGGRYDQLIGMFSQKNIPAVGFSVGVERIM 385

Query: 360 VALKSLE---SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++       + N+  +     +   +     L        +L    I  E+ L  +  
Sbjct: 386 SIIEKKFETCKTYNHSSKGSFTDVLICNIGDSFLEYRFKIASLLWDNHISCEISLTGNGK 445

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL YA   N P  II G  E  +  +Q K +             E+ +   ++   +
Sbjct: 446 LRKQLDYASNNNIPYCIIIGESEALKKTVQFKFIHN------NQSEAEAEQTTSISSQEV 499

Query: 477 PISELVSTVKKIL 489
            I++LVS ++ I+
Sbjct: 500 HINDLVSHIQSII 512


>gi|134277363|ref|ZP_01764078.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134251013|gb|EBA51092.1| histidyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 446

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 105/503 (20%), Positives = 201/503 (39%), Gaps = 68/503 (13%)

Query: 1   MGKKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M ++ +    L   +G  D   ++  +      +++++   YG+  I TP++E++    +
Sbjct: 1   MTEQKRKLERLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S  D  +G+ ++LR + TA + R   E+      P R + +GP+FR
Sbjct: 61  GIGEVTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         
Sbjct: 121 HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSL------ 174

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ E+   H  + +      +  +D   +  L    L + + +     +  + A      
Sbjct: 175 GLAEERAAHRVELIKYLEQHVDKLDDDAQRRLYTNPLRVLDTKNPALQEIVRNA------ 228

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL          L  L+K                              I+  +V
Sbjct: 229 -PQLIDFLGDVSRAHFDGLQRLLKANNL-----------------------PFTINPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++G+ 
Sbjct: 265 RGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GS 413
           R++  LK          E   V +  +     +  +  +  + LR  G+   +     G+
Sbjct: 317 RILELLKEEHLVP----EQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGA 372

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVA 472
             +F +Q+K AD      A+I G  E + G + +K L   G E  + +            
Sbjct: 373 GASFKSQMKRADASGAAFAVIFGEDEVANGTVSVKPLRGTGAEGEKNV------------ 420

Query: 473 QITIPISELVSTVKKILQENKEE 495
           Q ++P+  L   +   +    E+
Sbjct: 421 QQSVPVESLTEFLINAMVATAED 443


>gi|52425975|ref|YP_089112.1| histidyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81691321|sp|Q65R83|SYH_MANSM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|52308027|gb|AAU38527.1| HisS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 427

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 104/494 (21%), Positives = 200/494 (40%), Gaps = 70/494 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   +   +R+   +YG+  I  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTETPVWQWVESKVRSTLASYGYSEIRMPIVENTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +F+  D D + ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVSKEMFTFNDRDNESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ ++ A   + +GI+++   + +N+   L+   
Sbjct: 117 PQKGRYRQFHQAGVEVFGIANAEIDAELIILTARLWKELGIEQH-VTLQLNSIGSLEA-- 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                    +  ++ + L   ++ ++     +++L      D   +  + A         
Sbjct: 174 RANYRSALVEFLQQYVGLMNEEEKERLLKNPLRIL------DTKNEALQQA---LNNAPK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  D  +    L  ++                              +I+  +VRGL
Sbjct: 225 LLDYLDDDSREHFARLCAILDN-----------------------VGISYEINPKLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G++ GGGRYDGLV +  G      GF++G+ RLI
Sbjct: 262 DYYNKTVFEWVTTA--------LGAQGTICGGGRYDGLVEQLGGHATCGVGFAMGLERLI 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +  +    +    V I  +    ++ S      + +R+    +R  M   S  NF
Sbjct: 314 LLVQEVNKAIPLPQS--AVDIYLIFAGENTASAAFRLAEKVRSELPHLRT-MMHCSGGNF 370

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q K AD+    +A++ G  E     + +KDL  G E                 Q T+ 
Sbjct: 371 KKQFKRADKSGAKIALVLGESEVQNQQVVVKDLLGGAE-----------------QQTVA 413

Query: 478 ISELVSTVKKILQE 491
           +  ++  +K   +E
Sbjct: 414 LEAVIDHLKTSFKE 427


>gi|255012386|ref|ZP_05284512.1| histidyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 451

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 142/483 (29%), Positives = 220/483 (45%), Gaps = 61/483 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I ++IR ++  YGF  IETP +E   +L GK+  + D  
Sbjct: 3   KPSIPKGTRDFSPEEMAKRNYIFNTIREVFHLYGFQQIETPAMENLSTLMGKYGEEGD-- 60

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F + +          + +                LRYDLT P ARYV ++ + I F
Sbjct: 61  -KLLFKILNSGDCFAGISDEELMEKNPLRFAAKACEKGLRYDLTVPFARYVVQHRNEISF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  +M +     GI    
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDGDVVGSDSLINEVELIQIMDEVFHRFGI---R 176

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L         
Sbjct: 177 VCIKMNNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNEEL--------- 222

Query: 225 DFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
              +   L  E I+ +     L    ++ +  L E++  +  G KG  EL  I E +  +
Sbjct: 223 ---RSKGLPEEAIERLQPIIMLQGSNQEKIATLKEVLSASETGLKGVAELDFILERISHT 279

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
              +  +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 280 SIRA-ELELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            + V   GFS G  R+   L  L+       +   +L        +           +R 
Sbjct: 330 MEGVSGVGFSFGADRIFDVLNQLDLYPEGSLKTTQLLFVNFGQKEEI--HLLPLIAKVRK 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIR E++  S+K    Q+ YAD +  P   I G  E +   + +K++  G++    I+ 
Sbjct: 388 AGIRTELYPESTK-MKKQMGYADAKKIPFVAIVGENEMAENKINLKNMLTGEQTLVTIEE 446

Query: 463 NES 465
              
Sbjct: 447 LIE 449


>gi|218246037|ref|YP_002371408.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226737067|sp|B7K2B6|SYH_CYAP8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|218166515|gb|ACK65252.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 429

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 103/472 (21%), Positives = 189/472 (40%), Gaps = 60/472 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +   G  D   +EI     +      I     +  I  P+ E +    + + +  D  
Sbjct: 3   TIQTLPGTRDILPEEIGYWQYVETITTEILSRAMYQEIRAPIFEQTSLFERGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRF 125
            K +++ +D   + ++LR + TA + R   +N         R +  GP+FR E+   GR 
Sbjct: 63  GKEMYTFKDRGDRSVTLRPEGTAGVVRAYLQNNLYATGGVQRLWYQGPMFRYERPQAGRQ 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEK 181
           RQF Q  ++ +GS    AD E+  +  D L+ +G++     +      N+R+     L  
Sbjct: 123 RQFHQIGLELLGSGDPRADVEVIALATDILKKLGLQSLKLDLNSVGDRNDRQRYREALVN 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             L   ++L+         D  D+     +++L  + +              ++    ++
Sbjct: 183 YFLPYKNELD--------PDSQDRLERNPLRILDSKNQRTKE---------INQNAPSIL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L    +K   ++ +L+                          +   +++  +VRGL+Y
Sbjct: 226 QYLGDQSKKHFDQVQQLLTDL-----------------------NISYQLNPCLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E         +        +V GGGRYDGLV+   G + PA G++IG+ RLI+ 
Sbjct: 263 YTHTAFEI--------QSDDLGAQATVCGGGRYDGLVAELGGPDTPAVGWAIGMERLIIL 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           LK  ++  + + +     I  +     + ++  +  Q LR  G+  E+ L S   FG Q 
Sbjct: 315 LKQRQTVPHCVPD-----IYIVSKGEQAEAQALILAQKLRFEGLTVELDL-SGSAFGKQF 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K ADR      I+ G  E     LQ+K LA  ++ + +     S      AQ
Sbjct: 369 KRADRSGAIACIVLGDEEAGTQTLQLKWLATKQQETLDQTQLVSEIGELKAQ 420


>gi|21911351|ref|NP_665619.1| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896725|ref|NP_803075.1| histidyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|32130114|sp|Q8K5I9|SYH_STRP3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|21905567|gb|AAM80422.1| putative histidyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811979|dbj|BAC64908.1| putative histidine-tRNA ligase [Streptococcus pyogenes SSI-1]
          Length = 426

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 99/475 (20%), Positives = 176/475 (37%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR R+F Q  V+  G++    D E   M     E +GIK    H+       +R      
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRSAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L++        D   +     +++L  + + D          L  E+  
Sbjct: 181 LIDYLTPMRDQLSK--------DSQRRLDENPLRVLDSKEKEDK---------LAVEKAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +     +  +++                              I + +VRG
Sbjct: 224 SILDYLDEESQAHFEAVKAMLEAL-----------------------DIPYVIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL
Sbjct: 261 LDYYNHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++    +     EM    +        + SK     Q +R  G  AE      +   
Sbjct: 313 LMVIEKQGITLPIETEMD---VYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD     L +  G  E   G   IK+    +E+    ++  +       Q
Sbjct: 369 AQFKSADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFANISEQ 423


>gi|198276280|ref|ZP_03208811.1| hypothetical protein BACPLE_02472 [Bacteroides plebeius DSM 17135]
 gi|198270722|gb|EDY94992.1| hypothetical protein BACPLE_02472 [Bacteroides plebeius DSM 17135]
          Length = 454

 Score =  253 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 142/483 (29%), Positives = 216/483 (44%), Gaps = 61/483 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR ++  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIREVFYRYGFQQIETPSMENLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGLTDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + ++I PV+R ++   GR+R+F QCD D VGS++   + E+  M+    +  GI    
Sbjct: 121 PFKRFQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELVQMIDAVFQKFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L         
Sbjct: 178 VSIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNAELA-------- 224

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  +  E ID +     LS   E+ +  L  ++  +  G KG  E   I + +   
Sbjct: 225 ----SKGIPQEAIDKLQPIILLSGSNEEKIATLKNVLAASETGLKGVEESEFILKTIAGL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G  S  +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 GIQS-EVELDLTLARGLNYYTGAIFEV---------KALDVQIGSISGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            + +   G S G  R+   L  L+           +L           +        +R 
Sbjct: 331 MEGMSGVGISFGADRIYDVLNQLDLYPKEAVNGTQLLFVNFGEAEA--AYVLPVLAQVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE++  ++K    Q+ YA+ +  P   I G  E   G + +K++  G++       
Sbjct: 389 AGIRAEIYPDAAK-MKKQMSYANAKMVPFVAIVGENEMKEGKVMLKNMTSGEQSLVTPDE 447

Query: 463 NES 465
             +
Sbjct: 448 LVA 450


>gi|162139069|ref|YP_597556.2| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|162139118|ref|YP_601442.2| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 426

 Score =  253 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 100/475 (21%), Positives = 177/475 (37%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR R+F Q  V+  G++    D E   M    LE +GIK    H+       +R      
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLLEKLGIKDVTLHLNSLGSPESRSAYRQT 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L++        D   +     +++L  + + D          L  E+  
Sbjct: 181 LIDYLTPMRDQLSK--------DSQRRLDENPLRVLDSKEKEDK---------LAVEKAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +     +  +++                              I + +VRG
Sbjct: 224 SILDYLDEESQAHFEAVKAMLEAL-----------------------DIPYVIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL
Sbjct: 261 LDYYNHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++    +     EM    +        + SK     Q +R  G  AE      +   
Sbjct: 313 LMIIEKQGLALPIETEMD---VYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD     L +  G  E   G   IK+    +E+    ++  +       Q
Sbjct: 369 AQFKSADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFANISEQ 423


>gi|19746998|ref|NP_608134.1| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|32130117|sp|Q8NZ19|SYH_STRP8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|19749254|gb|AAL98633.1| putative histidine-tRNA ligase [Streptococcus pyogenes MGAS8232]
          Length = 426

 Score =  253 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 96/471 (20%), Positives = 177/471 (37%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  G++    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + ++L    + D   +     +++L  + + D          L  E+   ++ 
Sbjct: 181 LIDYLTPMRDQL----SKDSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                         +    I + +VRGL+YY
Sbjct: 228 YLDEESQAHFEAVKDMLEAL-----------------------NIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL++ +
Sbjct: 265 NHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMVI 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    +        + SK     Q +R  G  AE      +    Q K
Sbjct: 317 EKQGITLPIETEMD---VYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     L +  G  E   G   IK+    +E+    ++  +       Q
Sbjct: 373 SADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFANISEQ 423


>gi|301062985|ref|ZP_07203550.1| histidine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300442866|gb|EFK07066.1| histidine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 417

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 99/466 (21%), Positives = 185/466 (39%), Gaps = 54/466 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           +     +GF D   +E      I    R++   +G+  I TP+LE +    + +  + D 
Sbjct: 1   MEFTSLKGFKDILPEESARWQEIETKARHLLSAFGYQEIRTPVLENTALFSRGIGQETDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR-IGPVFRNEKHGPGR 124
            +K ++S +D  G+ +++R + TA + R   ++     +P +    IGP+FR+E+   GR
Sbjct: 61  VSKEMYSFEDVKGRGLTMRPEATASVVRAYVQHRLYQNYPIQKLYAIGPMFRHERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIG 183
           FRQF Q DV+  G     +DAEM  +     EA+G++    HI             + + 
Sbjct: 121 FRQFHQIDVEFFGDPGPISDAEMISLAMHFFEAIGLRELTLHINSLGCPDCQPEFKDHLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           ++  D+ ++        D   +  +  +++   +          +      +    + +F
Sbjct: 181 VYLADRASDL-----CPDCQIRAQINPLRVFDCK---------VETCKSIVQNAPTIPAF 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +       L   + G     +  + L                       VRGL+YY 
Sbjct: 227 LCGNCRDHFDSLKAHLDGLNISFEMNDLL-----------------------VRGLDYYN 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E         + +      +V GGGRYDGLV    G + PA GF++G+ R++  L+
Sbjct: 264 RTTFEI--------QTEHLGAQNAVAGGGRYDGLVKTLGGPDHPAIGFAVGVERVVALLE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           + ES      E     +      S        +T  LR  GI  E+  G  K   +Q+K 
Sbjct: 316 ASESLEPRRPE-----LFIAALGSKVRLLTFQWTTALRKQGIWVELDYG-GKGLKSQMKK 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           A R      +I G  E +     ++++   +++  + +   S  + 
Sbjct: 370 AGRLGARNVLIVGDDEVAAKKAILRNMETREQMDIDFETLISTLKE 415


>gi|161761295|ref|YP_061151.2| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|73919756|sp|Q5X9E5|SYH_STRP6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
          Length = 426

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 96/471 (20%), Positives = 176/471 (37%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  G++    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + ++L    + D   +     +++L  + + D          L  E+   ++ 
Sbjct: 181 LIDYLTPMRDQL----SKDSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 YLDEESQAHFEAVKDMLEAL-----------------------DIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL++ +
Sbjct: 265 NHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMVI 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    +        + SK     Q +R  G  AE      +    Q K
Sbjct: 317 EKQGITLPIETEMD---VYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     L +  G  E   G   IK+    +E+    ++  +       Q
Sbjct: 373 SADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFANISEQ 423


>gi|293391766|ref|ZP_06636100.1| histidyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952300|gb|EFE02419.1| histidyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 425

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 96/476 (20%), Positives = 183/476 (38%), Gaps = 55/476 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   + + +R++ + YG+  I  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCLPTETPLWQWVENKVRSVLQAYGYAEIRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +F+  D D + ++LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMFTFNDRDDESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+  + A   + +GI  +   + +N+   L+   
Sbjct: 117 PQKGRYRQFHQVGVEIFGIPNPEIDAELIALTARLWKDLGIF-DHVTLQLNSIGSLEA-- 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            K          +  + +   D   +     +++L  + +                    
Sbjct: 174 RKNYRQALVAFLQNHLDILDEDSKRRLTTNPLRILDSKDQRVQQ---------VLNDAPK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +L  +  +   +L  L+       +   +L                       VRGL
Sbjct: 225 LHDYLDEESREHFAQLCALLDNLGIKYEINQKL-----------------------VRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 262 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATAGVGFAMGLERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +            V I  +     +        + LR+    +R  +   S  NF
Sbjct: 314 LLVQEVNKHITLPSA---VDIYIVYQGEGTTVAAFSLAEKLRSELPHLRT-LLHCSGGNF 369

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARVA 472
             Q K AD+    LA++ G  E     + +K+L +  +++   + +  +  +    
Sbjct: 370 KKQFKRADKSGAKLALVIGEDEVKNQQVVVKELLQHSEQVVVALSDITTHIQNTFK 425


>gi|116750724|ref|YP_847411.1| histidyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116699788|gb|ABK18976.1| histidyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 421

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 184/463 (39%), Gaps = 60/463 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    +I    ++  + R + E++G+  I TP+LE  +   + + +  D   
Sbjct: 4   IQAIRGMNDILPGQIEWWQKVEKAAREVLEDFGYREIRTPVLEKLELFARGIGESTDIVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR-IGPVFRNEKHGPGRFR 126
           K +++  D  G  + LR + TA + R   ++        + +  +GP+FR+E+   GR+R
Sbjct: 64  KEMYAFPDRKGDMLGLRPEATASVVRAYIQHNLQADPFTQKFYLMGPMFRHERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKI 182
           QF Q D +  G      DAE+  M+    E VG+       +       R+    +L++ 
Sbjct: 124 QFHQIDAEAFGIDDPMLDAEVMYMLRLFFERVGLSGVVLHINSLGCHECRQEYRSVLKEY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                ++L          D L +     +++   +          +      E   ++  
Sbjct: 184 LGGHVERL--------CPDCLRRRETNPLRVFDCK---------VERCQAVLEDAPLLPD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           ++  D  +    + + ++                              I   +VRGL+YY
Sbjct: 227 YICGDCGEHFARVRDYLQQLQTD-----------------------FVIDPRMVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E I          +     +VGGGGRY+GLV    G ++P  GF+IG+ RLI+ L
Sbjct: 264 TRTTFEVIT--------DRLGAQNAVGGGGRYNGLVRDLGGPDLPGIGFAIGMERLILLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +     +          +        +  K  +  Q  R  G+  E     +++  +Q++
Sbjct: 316 QQEGEESKRSPR-----LFIATLGEAARLKGFLLAQQFRALGVSTETDY-EARSLKSQMR 369

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            ADR      +I G  E +RG +Q++DL +  +++  + +   
Sbjct: 370 RADRSGARYVLILGEEEIARGEIQLRDLREKSQVNLPLASASE 412


>gi|189462888|ref|ZP_03011673.1| hypothetical protein BACCOP_03588 [Bacteroides coprocola DSM 17136]
 gi|189430504|gb|EDU99488.1| hypothetical protein BACCOP_03588 [Bacteroides coprocola DSM 17136]
          Length = 453

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 145/486 (29%), Positives = 220/486 (45%), Gaps = 61/486 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR ++  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFNTIREVFYLYGFQQIETPSMENLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGLTDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEISF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + ++I PV+R ++   GR+R+F QCD D VGS++   + E+  M+       GI    
Sbjct: 121 PFKRFQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELVQMIDAVFSKFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL+ V   L         
Sbjct: 178 VSIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLENVNAELA-------- 224

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  +  E ID +     LS   E+ +  L  ++  +  G KG  E   I + +   
Sbjct: 225 ----SKGIPQEAIDKLQPIILLSGSNEEKLETLKSVLAASETGLKGVEESEFILKTISTL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G  S  +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 GIKS-EVELDLTLARGLNYYTGAIFEV---------KALDVQIGSISGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +   G S G  R+   L  L+    +      +L           +        +R 
Sbjct: 331 MDGMSGVGISFGADRIYDVLNQLDLYPEDASFGTQLLFVNFGEAEA--AYVLPVLAKVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE++  S+K    Q+ YA+ +  P   I G  E + G + +K++A G++     + 
Sbjct: 389 AGIRAEIYPDSAK-MKKQMSYANAKAIPFVAIVGENEMNEGKVMLKNMATGEQNLLAPEE 447

Query: 463 NESWRE 468
             +   
Sbjct: 448 LIAAIR 453


>gi|209560240|ref|YP_002286712.1| histidyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238064858|sp|B5XJ83|SYH_STRPZ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|209541441|gb|ACI62017.1| Histidyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 426

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 96/471 (20%), Positives = 176/471 (37%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  G++    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + ++L    + D   +     +++L  + + D          L  E+   ++ 
Sbjct: 181 LIDYLTPMRDQL----SKDSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 YLDEESQAHFEAVKDMLEAL-----------------------DIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL++ +
Sbjct: 265 NHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMII 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    +        + SK     Q +R  G  AE      +    Q K
Sbjct: 317 EKQGITLPIETEMD---VYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     L +  G  E   G   IK+    +E+    ++  +       Q
Sbjct: 373 SADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFANISEQ 423


>gi|298374746|ref|ZP_06984704.1| histidine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|301308429|ref|ZP_07214383.1| histidine--tRNA ligase [Bacteroides sp. 20_3]
 gi|298269114|gb|EFI10769.1| histidine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|300833899|gb|EFK64515.1| histidine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 451

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 141/483 (29%), Positives = 217/483 (44%), Gaps = 61/483 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I ++IR ++  YGF  IETP +E   +L GK+  + D  
Sbjct: 3   KPSIPKGTRDFSPEEMAKRNYIFNTIREVFHLYGFQQIETPAMENLSTLMGKYGEEGD-- 60

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F + +          + +                LRYDLT P ARYV ++ + I F
Sbjct: 61  -KLLFKILNSGDCFAGISDEELMEKNPLRFAAKACEKGLRYDLTVPFARYVVQHRNEISF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  +M +     GI    
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDGDVVGSDSLINEVELIQIMDEVFHRFGI---R 176

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L         
Sbjct: 177 VCIKMNNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNEEL--------- 222

Query: 225 DFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
              +   L  E I+ +     L    ++ +  L E++  +  G KG  EL  I E +   
Sbjct: 223 ---RSKGLPEEAIERLQPIIMLQGSNQEKIATLKEVLSASETGLKGVAELDFILERIS-H 278

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
                 +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 279 TPIRAELELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            + V   GFS G  R+   L  L+       +   +L        +           +R 
Sbjct: 330 MEGVSGVGFSFGADRIFDVLNQLDLYPEGSLKTTQLLFVNFGQKEEI--HLLPLIAKVRK 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIR E++   +K    Q+ YAD +  P   I G  E +   + +K++  G++    I+ 
Sbjct: 388 AGIRTELYPEPAK-MKKQMGYADAKKIPFVAIVGENEMAENKINLKNMLTGEQTLVTIEE 446

Query: 463 NES 465
              
Sbjct: 447 LIE 449


>gi|265765836|ref|ZP_06093877.1| histidyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263253504|gb|EEZ24969.1| histidyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 454

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 148/481 (30%), Positives = 214/481 (44%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I + IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFNIIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNKELAEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++  +  G KG  E   I   ++  
Sbjct: 227 ------GISEEAIAKLQPIILLSGTNAEKLATLKTVLSDSETGLKGVEESEFILNTLQTM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S         R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTQLLFINFGEKEAAFS--MGILSKARA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  ++K    Q+ YA+ +N P   I G  E + G   +K++  G++     + 
Sbjct: 389 AGIRAEIFPDAAK-MKKQMSYANVKNIPFVAIVGENEMNEGKAMLKNMESGEQQLVTAEE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|193213437|ref|YP_001999390.1| histidyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|229558644|sp|B3QQI7|SYH_CHLP8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|193086914|gb|ACF12190.1| histidyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 430

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 96/476 (20%), Positives = 181/476 (38%), Gaps = 59/476 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
           + +  +G  D    EI   + +   IR++ E YGF  + TP+ EY++   + +    D  
Sbjct: 3   QLQAVKGTRDIFPDEIARWHYVEGVIRSVAELYGFSEVRTPVFEYTELFQRGIGATTDIV 62

Query: 67  NKGVFSLQ-DDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            K +F+ Q D +G+ ++LR ++TA + R   + N  +     + Y I  +FR E+   GR
Sbjct: 63  GKEMFTFQPDPNGRSLTLRPEMTAGVMRACLQKNLLSQSPVSKLYYISDLFRKERPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILE 180
            RQF Q   + +G S   A AE+   M     ++G+      I      ++R      L 
Sbjct: 123 QRQFTQFGAELLGVSNPAAVAEVLTFMMQVFSSLGLHGLRLRINSLGDLDDRARYREALR 182

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +   + L          D+  K  L+   L + + +     +   GA      +   
Sbjct: 183 DYFMPYQNDL----------DEPSKERLEKNPLRILDSKNPALQEMIAGAPRLYASLKP- 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                                     +   +   +   +           +   +VRGL+
Sbjct: 232 --------------------------ESVADFEKVLSYLDDR---QIAYDVDHLLVRGLD 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLI 359
           YY    +E            +     ++GGGGRYDGL        ++PA GF++G+ RL+
Sbjct: 263 YYCHAAFEVT--------SSELGAQDAIGGGGRYDGLARELGASNDLPAVGFAVGMERLM 314

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +A++              V +       +           LR +G++ E+ L + ++   
Sbjct: 315 IAMEKQGLFATLNPHGPLVYVVV--QQKELTDHAMQVAFRLRKSGLKTEIDL-AGRSMKA 371

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           Q++ A+R     A+  G  E   G   +K+L   ++ S ++          V+Q +
Sbjct: 372 QMRDANRMGAAYALFIGQSEMESGHYALKNLETSEQTSLDLDAIIEVLHEAVSQES 427


>gi|332638292|ref|ZP_08417155.1| histidine--tRNA ligase [Weissella cibaria KACC 11862]
          Length = 436

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 98/484 (20%), Positives = 186/484 (38%), Gaps = 52/484 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K++    + P+G AD    E    + + ++ R ++ +Y +  + TP+ E  D   +  
Sbjct: 1   MAKQS---FQKPKGTADLLPGESLKWHYVEETARVLFGDYQYSEVRTPIFESFDVFARSA 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFR 116
            D  D   K ++   D   + ++LR + TA + R   EN         P + + IGP+FR
Sbjct: 58  GDTSDVVTKEMYDFHDKGDRHVALRPEGTAGVVRAFVENKLFGPEHQKPYKMFYIGPMFR 117

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            E+   GR RQF Q  V+ +GS +   DAE+  M  D  + +G+      I     K   
Sbjct: 118 YERPQAGRMRQFHQIGVEALGSDSPALDAEVIAMAVDFFQTLGVTNLKVKINSLGDKASR 177

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
               +  ++      + L    + D   +     +++L  +   D +             
Sbjct: 178 ENYRQALINFLTPHFDEL----SADSQTRLEKNPLRVLDSKDAKDQA---------IVAD 224

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ +L+                    E        +   +   G +    ++ + +V
Sbjct: 225 APSILDYLT--------------------ESAQAHWDKVQTYLEAMGID---YEVDANVV 261

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   ++E +     +           + GGGRY+GLV  F G  +P  GF IG+ 
Sbjct: 262 RGLDYYNHTIFEVMTQSEALGHGWTT-----ITGGGRYNGLVEEFGGPEMPGVGFGIGLE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL++ L+S  ++      +    +   +    +        Q +R+ G  AE      + 
Sbjct: 317 RLMLLLESEGATLPEQAPLD---VYVANTGDGTDVVAMQMVQAVRSFGYSAERDY-QDRK 372

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q K ADR      I  G  E +     +K++  GKE++ ++    +     +    +
Sbjct: 373 LKGQFKSADRLGARFMITIGERELAEQSANLKNMTTGKEITVKLAELYTGLPEFIEDEEV 432

Query: 477 PISE 480
              +
Sbjct: 433 TEED 436


>gi|254883595|ref|ZP_05256305.1| histidyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319642337|ref|ZP_07996995.1| histidyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254836388|gb|EET16697.1| histidyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317386060|gb|EFV66981.1| histidyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 454

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 143/481 (29%), Positives = 217/481 (45%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR+++  +G+  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFNTIRDVFHLFGYQQIETPSMENLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFNGITDEELLGRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEISF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS++   + E+  M+       G+    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELVQMIDRVFGKFGV---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL+ V   L         
Sbjct: 178 VSIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLENVNAELA-------- 224

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  +  E ID +     LS   E+ +  L  ++  + AG KG  E   I + V   
Sbjct: 225 ----SKGIPQEAIDKLQPIILLSGSNEEKLETLKTVLATSEAGLKGVEESEFILKTVSAL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G  S  +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 GVKS-EVELDLTLARGLNYYTGAIFEV---------KALDVQIGSISGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +   G S G  R+   L  L+           +L           +        +R 
Sbjct: 331 MDGMSGVGISFGADRIFDVLNQLDLYPKEAVNGTELLFVNFGDKEA--AYCLPILAKVRE 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AG+RAE++  +SK    Q+ YA+ +  P   I G  E + G L +K++  G++       
Sbjct: 389 AGVRAEIYPDASK-MKKQMGYANDKQIPFVAIVGENEMNEGKLTLKNMTTGEQSLVTPDE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|327294407|ref|XP_003231899.1| histidyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326465844|gb|EGD91297.1| histidyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 527

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 129/536 (24%), Positives = 219/536 (40%), Gaps = 73/536 (13%)

Query: 1   MGKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M  K K     + P+G  D    +  +R+ I  +I N+++ +G   ++TP+ E  + L  
Sbjct: 1   MAPKGKNSFTLKTPKGTKDWSGPDALLRDNIFSTITNVFKRHGGMALDTPVFELREILAG 60

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                  
Sbjct: 61  KYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRNIKRYHLAKVYRRDQP 117

Query: 119 KHGPGRFRQFIQCDVDNVG--SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
               GR R+F QCD D  G       AD+E+  ++ +  E +G  + +Y I +N+RKILD
Sbjct: 118 AMTKGRMREFYQCDFDIAGAQFDPMVADSEVLKIVTEVFEDLG-WKGNYTIKVNHRKILD 176

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ E  G+  D    +   +  A+DKLDK   + V+  + +              L    
Sbjct: 177 GLFEVCGVPQD----KIRTISSAVDKLDKLPWEDVRKEMVD-----------DKGLDGAV 221

Query: 237 IDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            D + +++     + + E     E +    + + G +++ ++ E +   G   ++I    
Sbjct: 222 ADSIQTYVVRKGGRDLLESLLADEKLTANASAKAGLDDMALLLEYLEGFGVV-DKISFDM 280

Query: 294 TIVRGLEYYTGCVYEAILGF---------------------------PVMNEKQKPVVFG 326
           ++ RGL+YYTG +YE I                                       V  G
Sbjct: 281 SLARGLDYYTGVIYEVITEGSAPATATSAPESQALQRSAKKDKKADPDEDRSNDPSVGVG 340

Query: 327 SVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKSLESSTNNIK--EMGPVLITTM 383
           SV  GGRYD LV  F  +  +P  G S G+ R+    K+     NN        V +  M
Sbjct: 341 SVAAGGRYDDLVGMFSPKAQIPCVGVSFGVDRIFSITKARMQRENNANALRSSEVDVYVM 400

Query: 384 DHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
                     L +     + L  AGI+AE           Q K A+    P A+I G  E
Sbjct: 401 AFGGKGFTGLLKERMQICRSLWEAGIKAEFSYKVKPKLPAQFKAAETNGIPFAVILGEDE 460

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
            + G +++K++         + +    +E     + + I  L + +K+ L++   E
Sbjct: 461 LAAGKVRVKEM--------GLPDGHPEKEG----VLVDIDSLTTEIKQRLEKKASE 504


>gi|327467316|gb|EGF12816.1| histidine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 426

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 169/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + D  R  +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYVEDFARKTFRKYNYGEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q   +  GSS    D EM  M A   + +GI      +             + 
Sbjct: 121 GRLREFHQIGAECFGSSNPATDVEMIAMAAQFFKDIGITNVSLELNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L   L    + D   +     +++L  +   D +           E    ++ 
Sbjct: 181 LIDYLTPLKPSL----SADSQRRLEENPLRVLDSKEPEDKA---------AVEGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  +++                              I++ +VRGL+YY
Sbjct: 228 YLDEESSAYFAAVRSMLETL-----------------------QIPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E           +      ++  GGRYDGLV+ F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------EVAGSQLTICAGGRYDGLVAYFGGPETPGVGFGMGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I+    V +  +   ++         Q LR  G  AE      +    Q K
Sbjct: 317 DKQGV-ELPIETALDVYVAVLGAGANGR--ALELVQALRAQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E   G + +K+    +E+   +   + 
Sbjct: 373 SADIFRAKTLITLGESELESGQVTVKNNHNREEIIVSLDQIQE 415


>gi|150010350|ref|YP_001305093.1| histidyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|166228590|sp|A6LIF7|SYH_PARD8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|149938774|gb|ABR45471.1| histidyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 451

 Score =  253 bits (645), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 141/483 (29%), Positives = 220/483 (45%), Gaps = 61/483 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I ++IR ++  YGF  IETP +E   +L GK+  + D  
Sbjct: 3   KPSIPKGTRDFSPEEMAKRNYIFNTIREVFHLYGFQQIETPAMENLSTLMGKYGEEGD-- 60

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F + +          + +                LRYDLT P ARYV ++ + I F
Sbjct: 61  -KLLFKILNSGDCFAGISDEELMEKNPLRFAAKACEKGLRYDLTVPFARYVVQHRNEISF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  +M +     GI    
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDGDVVGSDSLINEVELIQIMDEVFHRFGI---R 176

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L         
Sbjct: 177 VCIKMNNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNEEL--------- 222

Query: 225 DFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
              +   L  E I+ +     L    ++ +  L +++  +  G KG  EL  I E +  +
Sbjct: 223 ---RSKGLPEEAIERLQPIIMLQGSNQEKIATLKKVLSASETGLKGVAELDFILERISHT 279

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
              +  +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 280 SIRA-ELELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            + V   GFS G  R+   L  L+       +   +L        +           +R 
Sbjct: 330 MEGVSGVGFSFGADRIFDVLNQLDLYPEGSLKTTQLLFVNFGQKEEI--HLLPLIAKVRK 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIR E++  S+K    Q+ YAD +  P   I G  E +   + +K++  G++    I+ 
Sbjct: 388 AGIRTELYPESTK-MKKQMGYADAKKIPFVAIVGENEMAENKINLKNMLTGEQTLVTIEE 446

Query: 463 NES 465
              
Sbjct: 447 LIE 449


>gi|123441419|ref|YP_001005406.1| histidyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166228630|sp|A1JKS3|SYH_YERE8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|122088380|emb|CAL11171.1| histidyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 424

 Score =  253 bits (645), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 98/477 (20%), Positives = 181/477 (37%), Gaps = 72/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAIWQRIEGILKQVLAGYGYSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ ++ A    A+G                   +
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELILLTARWWRALGISEHVQLELNSIGSLDARAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YREALVTFLEQHVDVLDE------------DCKRRMYSNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L       +  +L  + ++    L EL+                               
Sbjct: 216 QLLLNDAPKLSDYLDDESKQHFAGLCELL-----------------------NQAGIPYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 253 VNERLVRGLDYYNRTVFEWVTNS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++++       K    + +  +     + S      + +R     ++  
Sbjct: 305 FAMGLERLVLLVQAVN---PEFKVPATIDVYLISSGEGTQSAAMQLAERVRDVLPTLKLM 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              G   NF  Q+  AD+    +A+I G  E +   + +KDL  G++ +    +  +
Sbjct: 362 TNYGGG-NFKKQITRADKWGARVALILGESEVAAQQVVVKDLRNGEQETLAQADVAA 417


>gi|218960844|ref|YP_001740619.1| histidyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729501|emb|CAO80412.1| histidyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 419

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 101/458 (22%), Positives = 183/458 (39%), Gaps = 50/458 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++  +PRG  D   ++      + DS R +   +G++ I TP+ E ++   +   +  D 
Sbjct: 1   MKYNIPRGTFDILPEDSYKWQFLQDSFRKMATCFGYEEITTPIFEVAELFERSSGESSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K ++  QD  G+  +LR + TAP+ R   EN    +    + + +GP+FR ++   GR
Sbjct: 61  VQKEMYRFQDKKGREFALRPEGTAPVVRSYVENHLDKLSSRTKLFYLGPMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q  ++ +GS+    DAE+  +    L  +G+      I          + +K   
Sbjct: 121 YRQFYQYGIEFIGSNNPYYDAEVIAVAFLWLNKLGLNNLRLEINSVGCPDCSAVYDKALQ 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                       L  +       L+     L + +  +  +F K A    + +D      
Sbjct: 181 EY------YRPFLPKLCPDCVKRLETNPRRLLDCKVPSCIEFRKNAPSQMDYLD------ 228

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                                E        + + ++          I+  IVRGL+YYT 
Sbjct: 229 ---------------------EPCKKHFSAVCDYLQAMNIP---YTINPRIVRGLDYYTN 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E I                S+ GGGRY+GLV +  G+++PA GF+ G  RL++AL+ 
Sbjct: 265 TAFEIIYEG--------LGAQNSLVGGGRYNGLVEQIGGKSIPAIGFAGGFERLLLALEE 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +       +    L+       ++  +   Y   LRT G+  +     S +   QLK A
Sbjct: 317 EKIELIPPSKPDAYLVCV---GDNTRLQILPYLNALRTKGLIVDYDPDKS-SLKAQLKSA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
                  AII G  E +   + +K+L  G++++  +  
Sbjct: 373 ASSGAKYAIIIGENELATKTVNLKNLQTGEQIAIPMDE 410


>gi|15675899|ref|NP_270073.1| histidyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71911627|ref|YP_283177.1| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|32130143|sp|Q99XK9|SYH_STRP1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|13623136|gb|AAK34794.1| putative histidine-tRNA ligase [Streptococcus pyogenes M1 GAS]
 gi|71854409|gb|AAZ52432.1| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 426

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 97/471 (20%), Positives = 177/471 (37%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  G++    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + ++L    + D   +     +++L  + + D          L  E+   ++ 
Sbjct: 181 LIDYLTPMRDQL----SKDSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 YLDEESQAHFEAVKDMLEAL-----------------------DIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL++ +
Sbjct: 265 SHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMII 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    I        + SK     Q +R  G  AE      +    Q K
Sbjct: 317 EKQGITLPIETEMD---IYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     L +  G  E   G   IK+    +E+    ++  +       Q
Sbjct: 373 SADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFANISEQ 423


>gi|209521126|ref|ZP_03269854.1| histidyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209498436|gb|EDZ98563.1| histidyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 446

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 98/498 (19%), Positives = 192/498 (38%), Gaps = 64/498 (12%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK   +    +G  D   +E  +      +++++  +YG+  I TP++E++    + + +
Sbjct: 5   KKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ +++R + TA + R   E+      P R + +GP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYVGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I             
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLSGIKLEINSLGLAEERAAHR 184

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +   +K  + L      D   +     +++L  +                ++    +
Sbjct: 185 VELIAYLEKHMDVLD----EDAKRRLYTNPLRVLDTKN---------PALQEIAQNAPKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +       L  L+K                              I+  +VRGL+
Sbjct: 232 IDFLGEESRAHFEGLQRLLKANNL-----------------------PFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NF 417
            LK  +       E     +  +     +  +  +  + LR  G+   +   +     +F
Sbjct: 321 LLKEEQLVP----EDEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSADGQSASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q+K AD      A++ G  E + G + +K L                   +  Q  +P
Sbjct: 377 KSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD-----------TQANGGKNEQQNVP 425

Query: 478 ISELVSTVKKILQENKEE 495
             +L   +   +  + E+
Sbjct: 426 AEDLTEFLINAMVASAED 443


>gi|159027044|emb|CAO89230.1| hisS [Microcystis aeruginosa PCC 7806]
          Length = 426

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 103/473 (21%), Positives = 187/473 (39%), Gaps = 60/473 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    E+     + ++   I     +  I TP+ E +    + + +  D   
Sbjct: 4   IQAIRGTKDILPAEVGYWQWLEETASRILGTALYQEIRTPIFEQTQLFERGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R   E+         R +  GP+FR E+   GR R
Sbjct: 64  KEMYTFLDRGQRSLTLRPEGTAGVVRAYIEHKLQAAGGVQRLWYKGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEKI 182
           QF Q  V+ +G+    AD E+  + ++ L+AVG++     +       +R+     L   
Sbjct: 124 QFHQIGVELLGTDDPRADVEVITLASEILKAVGLENLKLDLNSLGNAQDRQNYRQALLDY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                  L+         D   +     +++L  +              +  E    ++ 
Sbjct: 184 LTPYKADLDA--------DSQQRLEKNPLRILDSKDEKTK---------IICENAPSILE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L  D +K    +  L+                               ++ ++VRGL+YY
Sbjct: 227 HLGSDSQKHFERVQSLLTDLGVI-----------------------YNLNPSLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E         +        +V GGGRYDGL+++  G + PA G++IG+ RLI+ L
Sbjct: 264 THTAFEI--------QSDDLGAQATVCGGGRYDGLIAQLGGPDTPAVGWAIGLERLIILL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +S +  + +        +     + ++  +  Q LR  G   E+ L S   FG Q K
Sbjct: 316 QQKQSLSFLVPD-----FYLVSKGEKAEARSVVLAQQLRGLGFSVELDL-SGSAFGKQFK 369

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            ADR      II G  E   G +Q+K +A  +++S    +  +      AQI+
Sbjct: 370 RADRAKAVGCIILGDAEAENGTVQLKWMATQEQISLTQADLLTQARELKAQIS 422


>gi|139474588|ref|YP_001129304.1| histidyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|166228619|sp|A2RGY1|SYH_STRPG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|134272835|emb|CAM31113.1| histidyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 426

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 98/471 (20%), Positives = 177/471 (37%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  G++    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + ++L    + D   +     +++L  + + D          L  E+   ++ 
Sbjct: 181 LIDYLTPMRDQL----SKDSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 YLDEESQAHFEAVKDMLEAL-----------------------DIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL++ +
Sbjct: 265 NHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMII 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    +        + SK     Q +R  G  AE      +    Q K
Sbjct: 317 EKQGITLPIETEMD---VYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     L +  G  E   G   IK+    +EL    ++  +  E    Q
Sbjct: 373 SADTFKAKLVMTLGESEVEAGKAVIKNNRSRQELEVSFEDMMTNFENISEQ 423


>gi|332992290|gb|AEF02345.1| histidyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 426

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 106/496 (21%), Positives = 195/496 (39%), Gaps = 75/496 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC  +      ++   +R +  +YG+  I TP++E +D   + +
Sbjct: 1   MAK----TIQAIRGMNDCLPEVSGTWQKVESVLRQVVASYGYQEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQQQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDG 177
              GR+RQF Q  V+  G      D E+ ++ A   +A GI+++       + + +    
Sbjct: 117 PQKGRYRQFHQFGVETYGLDGPDIDLEVILLSARLWKAFGIEKHVTLQINSLGSNEARQA 176

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             E +  +  ++ ++        + L +     +++L  +     +              
Sbjct: 177 YRETLISYLKERADKLD-----EESLRRLESNPLRVLDSKNPNVQAAIA---------DA 222

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++  L  + +     L E +       +    L                       VR
Sbjct: 223 PSLLDHLDEESKTHFDSLCERLTQAGISFEINPRL-----------------------VR 259

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +         +     G+V  GGRYDGLV +  G+  PA GF++G+ R
Sbjct: 260 GLDYYNRTVFEWVT--------ESLGSQGTVCAGGRYDGLVEQLGGKATPAVGFAMGMER 311

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           L++ L +L     +        +       D+ +     ++ LR     +R  M  G   
Sbjct: 312 LVLLLTTLSEDALDTSSAD---VYVTAMGDDAQAYALEVSEHLRDTLPNVRVMMHCGGG- 367

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           NF  QLK AD+     A++ G+ E     + +K L  G+E                 Q T
Sbjct: 368 NFKKQLKRADKTGARFALLLGSQEMQSREVAVKPLRDGQE-----------------QQT 410

Query: 476 IPISELVSTVKKILQE 491
           I  + L ST+  +L  
Sbjct: 411 IAFNALSSTIADLLNA 426


>gi|260911612|ref|ZP_05918197.1| histidine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634318|gb|EEX52423.1| histidine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 456

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 134/495 (27%), Positives = 214/495 (43%), Gaps = 66/495 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKF 59
           M K       +P+G  D    E+  RN I D+I+++Y  YG+  IETP +E   +L GK+
Sbjct: 1   MNK-----PSIPKGTRDFSPAEMAKRNYIFDTIKDVYALYGYQQIETPSMETLQTLMGKY 55

Query: 60  LPDEDRPNKGVFSLQDDD-------------GQWI---------SLRYDLTAPLARYVAE 97
             + D   K +F + +                  +          LRYDLT P ARYV  
Sbjct: 56  GEEGD---KLLFKILNSGDFIGKLPANEFVSDNVLKLAANICEKGLRYDLTVPFARYVVM 112

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           + D +  P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++      
Sbjct: 113 HRDELQMPFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELVQIIDTVFIK 172

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
            GI   +  I +NNRKIL GI E IG          + +  AIDKLDK G++ V   +  
Sbjct: 173 FGI---NVQIKLNNRKILAGIAEYIGQPDK-----IIDITVAIDKLDKIGVEAVNAEMLA 224

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVI 275
                         +T + +  +   L++     + +  + + +  +  G KG  E   I
Sbjct: 225 N------------GITQDAVGKLQPILTMSGTNVEKLETIAQTICTSEIGLKGVEETRFI 272

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
            E +   G   N +++  T+ RGL YYTG ++E          K K V  GS+ GGGRYD
Sbjct: 273 LEKIEAVG-LKNELQLDLTLARGLNYYTGAIFEV---------KAKDVAIGSITGGGRYD 322

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            L   F    +   G S G  R+   L  L+    N  +   VL                
Sbjct: 323 NLTGIFGMPGLSGVGISFGADRIYDVLNMLDLYPQNAIQATQVLFINFGEAEA--DYCLP 380

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
               +R AGI  E++   +K    Q+ YA+ +  P  ++ G  E + G + +K++  G +
Sbjct: 381 IASQIRAAGISVELYPDCAK-MKKQMAYANAKGIPFVVLAGESEINLGKVTLKNMLTGDQ 439

Query: 456 LSREIKNNESWREAR 470
                +   +   ++
Sbjct: 440 QLVSTEELIAIITSK 454


>gi|150026060|ref|YP_001296886.1| histidyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772601|emb|CAL44084.1| Histidine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 472

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 140/502 (27%), Positives = 218/502 (43%), Gaps = 70/502 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED- 64
           ++  +P+G  D    E+  R  I+  +R  +E +G+ PIETP  E S++L GK+  + D 
Sbjct: 1   MKPSIPKGTRDFSPAEVAKRQYIIQKMRTHFEKFGYQPIETPSFENSETLMGKYGEEGDR 60

Query: 65  ----RPNKGVFSLQDDD--------------------GQWI------------SLRYDLT 88
                 N G F                           + +            +LRYDLT
Sbjct: 61  LIFKILNSGNFFFNKKKIELPESIQSLQLNSAETIAVNELVELNKFTNNISEKALRYDLT 120

Query: 89  APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            P ARYV ++ + I FP + Y+I PV+R ++   GRFR+F QCD D VGS++   + E+ 
Sbjct: 121 VPFARYVVQHQNEIEFPFKRYQIQPVWRADRPQKGRFREFYQCDADVVGSTSLWQEVELV 180

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +       +G+      I INNRKIL GI E IG          +    A+DKLDK G 
Sbjct: 181 QLYDSVFTDLGLNG--VTIKINNRKILSGIAEVIGASNK-----LIDFTVALDKLDKIGE 233

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGE 266
            GVK  + E              ++   I+ +    +      + + +L  L+  +  G 
Sbjct: 234 DGVKKEMIEK------------GISETAIEKVQPLFNFAGSISEKIAKLSVLLAASTEGM 281

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
           KG  EL  I + V   G +S  + +  T+ RGL YYTG ++E            K V  G
Sbjct: 282 KGVEELQFICDNVTDLGLSSAILDLDVTLARGLNYYTGAIFEV--------APPKAVAMG 333

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
           S+GGGGRYD L   F  +N+   G S G+ R+ + ++ L      +      +      +
Sbjct: 334 SIGGGGRYDDLTGIFGLKNMSGVGISFGLDRIYLVIEELGLFPETVTTTSKAIFLNFGQE 393

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                        LR  GI+ E++  ++K    Q +YA++R   LAII G  E       
Sbjct: 394 ET--KYAMKAITQLRKEGIKVELYPDNAK-IAKQFQYAEKRGILLAIIVGNDEMQNNQFA 450

Query: 447 IKDLAKGKELSREIKNNESWRE 468
           +K+L  G++        +S  +
Sbjct: 451 VKNLVSGEQQKVSFDELKSLLQ 472


>gi|296109164|ref|YP_003616113.1| histidyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295433978|gb|ADG13149.1| histidyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 406

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 111/454 (24%), Positives = 199/454 (43%), Gaps = 52/454 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
              PRG  D   +E++ R  +   +R ++E+YG++ I TP  E  + + K   +E R  K
Sbjct: 2   ISKPRGTRDFTPEEMKKRRYVEKKLREVFESYGYEEILTPTFESFELIAKKTGEEIR--K 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ +SLR ++T+P+ R+          P R Y     FR E+   GRFR+F
Sbjct: 60  QLYVFKDHGGRELSLRPEMTSPVVRFYLNELKNYPKPLRLYYFANCFRYERPQAGRFREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G   E ADAE+  +  D L+ + +   ++ + I +  +L GIL K  +  ++
Sbjct: 120 WQMGCELIGCKREVADAEVINLAIDGLKNIDV---EFSLEIGHLGVLRGILRKFKVGEEE 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           ++                    ++ L+ +   ++   +     L  E+ D++ + L +  
Sbjct: 177 EV-------------------KIRRLIDKEDYESLDKYLTEI-LDKEKRDLIFNILELKG 216

Query: 249 EKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            K  + E  EL+K      +    L  I +      Y  +  KI+  I RGL+YYTG V+
Sbjct: 217 GKEILEEAKELLKDFPESLEAVRNLENILK------YTYDNYKINFGIARGLDYYTGMVF 270

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                   + GGGRYD L+  F G+  PA GF+ G  R+++       
Sbjct: 271 EIYGKKGAKQ----------ICGGGRYDNLIETFGGEPEPAVGFAYGFDRIMM------- 313

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             N   E+       +  + + + K      +LR  G + E+ +   +     L YA+ +
Sbjct: 314 --NVDIEIKEEKYLVIPLNENLIVKAMEIANILRKKGKKVELEI-MGRKLRKALDYANSK 370

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +I G  E   G + IKD+  G++   +I+
Sbjct: 371 GISKVVIVGEKEVKEGKVTIKDMESGEQKLVDIE 404


>gi|303288834|ref|XP_003063705.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454773|gb|EEH52078.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 503

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 96/462 (20%), Positives = 195/462 (42%), Gaps = 35/462 (7%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            +K  +  + P+G  D   +E+R+RN +    R++   +GF+  + P+LE  +   +   
Sbjct: 76  ARKKMIDLQPPKGTRDFAPEEMRVRNWLFGHFRDVARTFGFEEWDAPVLETEELYVRKAG 135

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +E      +++ +D   + ++LR +LT   AR + +   ++  P + + IG  +R E+  
Sbjct: 136 EE--ITTQLYNFEDKGNRRVALRPELTPSFARLILQQGKSLALPAKWFAIGQCWRYERMT 193

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR R+  Q ++D VG     A+AE+   + +    +GI   D  + +++RK+L  +L +
Sbjct: 194 RGRRREHYQWNMDIVGVDGVEAEAELLAAIVEFFTRLGITSADVGLKVSSRKVLQAVLTR 253

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             +         +                V   + +   +   +   G  +T + ID ++
Sbjct: 254 YDVPEASFAPVCV----------------VVDKIEKLPREKIVEELAGLGVTEDAIDGIL 297

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           + +       M  + +L     A      +L  +       GY ++ +   +++VRGL Y
Sbjct: 298 AAM------EMKTIDDLAALLGADADAVKDLTTLFSHAEAYGY-ADWLVFDASVVRGLSY 350

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG V+E            +     ++ GGGRYD L+    G++    GF  G + ++  
Sbjct: 351 YTGVVFEGF---------DRAGELRAICGGGRYDKLLGALGGEDRSMVGFGFGDAVIMEL 401

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +        ++K  G V        +            LR AG R ++ +   K      
Sbjct: 402 VNDRGLLPESLKT-GCVDDLVYPMTAALRPAAMAIAARLRKAGRRVDLVIEDGKKPKWVF 460

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           K+A+R      ++ G  E + G +++KDLA  +E   + ++ 
Sbjct: 461 KHAERSGAARVVLLGEKEWAEGKVRVKDLASREETDVDPESL 502


>gi|162139170|ref|YP_603425.2| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 426

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 98/471 (20%), Positives = 177/471 (37%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  G++    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + ++L    + D   +     +++L  + + D          L  E+   ++ 
Sbjct: 181 LIDYLTPMRDQL----SKDSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                              I + +VRGL+YY
Sbjct: 228 YLDEESQAHFEAVQDMLEAL-----------------------DIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL++ +
Sbjct: 265 NHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMII 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    I        + SK     Q +R  G  AE      +    Q K
Sbjct: 317 EKQGITLPIETEMD---IYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     L +  G  E   G   IK+    +E+    ++  +  E    Q
Sbjct: 373 SADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFENISEQ 423


>gi|71803580|gb|AAX72933.1| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 438

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 99/475 (20%), Positives = 178/475 (37%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   ++      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 13  MKLQKPKGTQDILPEDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 72

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 73  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 132

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR R+F Q  V+  G++    D E   M     E +GIK    H+       +R      
Sbjct: 133 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRSAYRQT 192

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L++        D   +     +++L  + + D          L  E+  
Sbjct: 193 LIDYLTPMRDQLSK--------DSQRRLDENPLRVLDSKEKEDK---------LAVEKAP 235

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +     + ++++                              I + +VRG
Sbjct: 236 SILDYLDEESQAHFEAVKDMLEAL-----------------------DIPYVIDTNMVRG 272

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL
Sbjct: 273 LDYYNHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERL 324

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++    +     EM    +        + SK     Q +R  G  AE      +   
Sbjct: 325 LMIIEKQGITLPIETEMD---VYLAVLGDSANSKALELVQAIRRQGFTAERDY-LGRKIK 380

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD     L +  G  E   G   IK+    +E+    ++  +       Q
Sbjct: 381 AQFKSADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFANISEQ 435


>gi|297569983|ref|YP_003691327.1| histidyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925898|gb|ADH86708.1| histidyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 421

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 92/456 (20%), Positives = 181/456 (39%), Gaps = 53/456 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +  +GF D    E  +  R+  + R ++  YGFD I+ P+LE +    + + +  D   K
Sbjct: 2   QALKGFKDILPDEAVLWQRVERTAREVFRRYGFDEIKVPILEKTGLFARSIGEATDIVEK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRFRQ 127
            +++  D +G+ I++R + TAP+ R   E+   +  P    + +GP+FR+E+   GR RQ
Sbjct: 62  EMYTFTDRNGESITMRPEGTAPVLRAFIEHSLHLRRPINRLFTVGPMFRHERPQKGRLRQ 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+ +G+     DAE+  M    L  + ++       +           ++     
Sbjct: 122 FHQLSVEALGTDHPRLDAEVVAMAHQLLVELQLQAELQLNSLGCPACRPAYRTRLVEFLR 181

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +        D   +     +++L  +                +     ++  L   
Sbjct: 182 GHQEQL-----CDDCRRRVESNPLRVLDCKS---------ANCRRLNADAPAILDSLCTP 227

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            E+ + ++   +                               ++  +VRGL+YYT   +
Sbjct: 228 CEEHLAQVRRDLDAL-----------------------QIPYTMNPFMVRGLDYYTRTTF 264

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +                +VG GGRYDGL+ +  G ++P  GF+ G+ RL++ L+   +
Sbjct: 265 ELLT--------DALGAQSAVGAGGRYDGLIKQLGGPDLPGIGFATGMERLVLLLQEQAA 316

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
           +  +  +     +        + +      Q  R AG+ A+M +   +   +Q+K ADR 
Sbjct: 317 TAADGPD-----LFLACLGEPAAAYGFTLLQQCRQAGLSAQMDI-QGRGLKSQMKQADRL 370

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           N    +I G  E + G   ++DL   +E    + + 
Sbjct: 371 NARQVLIIGEDELNAGQAVLRDLNSKEEHQLNLDDR 406


>gi|330996682|ref|ZP_08320560.1| histidine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329572754|gb|EGG54387.1| histidine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 454

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 138/473 (29%), Positives = 212/473 (44%), Gaps = 61/473 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I D+IR +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFDTIRGVYALYGFQQIETPAMENLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDG-------QWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F + +          + +                LRYDLT P ARYV ++ D +  
Sbjct: 62  -KLLFKILNSGNFLSGVATEELGEANTNRLAARLCEKGLRYDLTVPFARYVVQHRDELTM 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTQFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E IG          + +  AIDKLDK GL  V   L  G      
Sbjct: 178 VCIKLNNRKILTGIAEMIGAADK-----IVDITVAIDKLDKIGLDNVNAELKAG------ 226

Query: 225 DFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  L+ E +  +   +S+    ++ +  + +++ G+  G KG  E   + + +   
Sbjct: 227 ------GLSDEAVTRLQPIISLSGTNKEKLAVMKDVLAGSETGLKGIAECEFVLDTLSAL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N +++  T+ RGL YYTGC++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 GLR-NAMELDLTLARGLNYYTGCIFEV---------KALDVEIGSITGGGRYDNLTGIFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  L+           +L           +         R 
Sbjct: 331 MPGVSGVGISFGADRIFDVLNQLDLYPKETVTGTELLFVNFGAAEA--AYCLPVMAQARR 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
           AG+R E++  S+K    Q+ YA+ +  P   I G  E + G + +K++  G++
Sbjct: 389 AGVRCEIYPDSAK-MKKQMSYANAKAVPFVAIVGENEMNEGKVTLKNMETGEQ 440


>gi|167562550|ref|ZP_02355466.1| histidyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 446

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 98/498 (19%), Positives = 191/498 (38%), Gaps = 64/498 (12%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + +
Sbjct: 5   KRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ ++LR + TA + R   E+      P R + +GP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYVGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I             
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHR 184

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +   ++   +L      D   +     +++L  +                 +    +
Sbjct: 185 VELIKYLEQHVAQLD----DDAQRRLYTNPLRVLDTKN---------PALQEIVQSAPKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL          L +L+K                         +    I+  +VRGL+
Sbjct: 232 IDFLGDASRAHFEGLQKLLKAN-----------------------NVPFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++G+ R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNF 417
            LK          E   V +  +     +  +  +  + LR  G+   +     G+  +F
Sbjct: 321 LLKEESLVP----EQEGVDVYVVHQGDAAREQAFVVAERLRDTGLDVVLHCSADGAGASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q+K AD      A+I G  E + G   +K L                   +  Q ++P
Sbjct: 377 KSQMKRADASGAAFAVIFGEDEIANGTASVKPLR-----------GMGAEGEKNVQQSVP 425

Query: 478 ISELVSTVKKILQENKEE 495
           +  L   +   +    E+
Sbjct: 426 VESLTDFLINAMVATAED 443


>gi|307719261|ref|YP_003874793.1| histidyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532986|gb|ADN02520.1| histidyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 437

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 127/455 (27%), Positives = 220/455 (48%), Gaps = 42/455 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++  + +GF D        +  I+ ++  ++ ++G+ PI+TP+LEY++  LGK   +   
Sbjct: 2   IQPRVLKGFRDFLPDLEARKKSIVRTLEEVFTSFGYLPIDTPVLEYAEILLGKSGGET-- 59

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K V+   D  G+ ++LR+DLT P AR++A++   +  P R Y I  VFR E    GR+
Sbjct: 60  -EKQVYRFTDHGGRDVALRFDLTVPFARFMAQHMAELYLPFRRYHIAKVFRGENTQRGRY 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F+QCD D VG  + +AD E+ ++M   L ++G+    + I +++R +L   L ++G+ 
Sbjct: 119 REFMQCDFDIVGPDSTSADLEVLLIMQKALASLGM--ERFTIHLSHRGVLQDFLARLGVS 176

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL- 244
                   + VLR +DK+ K G + V+  L +                 E+   ++ F+ 
Sbjct: 177 E------PVEVLRTVDKIRKIGREKVRETLAQLS-------------DEERAGRILDFIA 217

Query: 245 -SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              + E+++  + E V           E+  +   +  +G+      I  +I RGL+YYT
Sbjct: 218 PGSEPEEALSRMEEGVGADNPHLARLKEIWAVIGELGLAGF----FTIDPSITRGLDYYT 273

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+E  L              GSV  GGRYD LV  +  Q++   G SIG+ RL+ A++
Sbjct: 274 GVVFETFLSD--------LPDIGSVCSGGRYDNLVGLYSTQSMSGVGASIGLDRLMAAMQ 325

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
            L            VL+  M  +   L+ Y      LR  G+R E++   ++  G Q  Y
Sbjct: 326 ELGMLEAIPTMAPEVLVVCM--EERFLAHYHGVAAALRARGVRTEVYP-QARKLGQQFSY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           A+++  P A+I G  E + G + +KDL    +   
Sbjct: 383 AEKKGIPFALIMGEDEIAAGTMALKDLVARTQRVV 417


>gi|29347250|ref|NP_810753.1| histidyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253571985|ref|ZP_04849390.1| histidyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|32130101|sp|Q8A6N7|SYH_BACTN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|29339149|gb|AAO76947.1| histidyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251838582|gb|EES66668.1| histidyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 454

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 145/487 (29%), Positives = 217/487 (44%), Gaps = 61/487 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++        I    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSRFNI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL+ V   L E       
Sbjct: 178 VCIKINNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLENVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++  +  G KG  E   I   +   
Sbjct: 227 ------GISDEAIAKLQPIILLSGTNTEKLATLKSVLAASETGMKGVEESEFILGTLETM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           ++         + S        +R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTELMFVNFGDKEAAFS--MSMLAKVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  ++K    Q+ YA+ ++ P   I G  E + G   +K++  G++    ++ 
Sbjct: 389 AGIRAEIFPDAAK-MKKQMSYANAKSVPFVAIVGENEMNEGKAMLKNMETGEQNLVSVEE 447

Query: 463 NESWREA 469
             +    
Sbjct: 448 LIAALRN 454


>gi|162139093|ref|YP_599515.2| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 426

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 102/475 (21%), Positives = 177/475 (37%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR R+F Q  V+  G++    D E   M     E +GIK    H+       +R      
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRSAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L++        D   +     +++L  + + D          L  E+  
Sbjct: 181 LIDYLTPMRDQLSK--------DSQRRLDENPLRVLDSKEKEDK---------LAVEKAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +     +  +++                              I + +VRG
Sbjct: 224 SILDYLDEESQAHFEAVKAMLEAL-----------------------DIPYVIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL
Sbjct: 261 LDYYNHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++    +     EM    I        + SK     Q +R  G  AE      +   
Sbjct: 313 LMIIEKQGITLPIETEMD---IYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD     L +  G  E   G   IK+    +EL    ++  +  E    Q
Sbjct: 369 AQFKSADTFKAKLVMTLGESEVEAGKAVIKNNRSRQELEVSFEDMMTNFENISEQ 423


>gi|322412866|gb|EFY03774.1| histidyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 426

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 98/471 (20%), Positives = 174/471 (36%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MAFQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  G++    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + ++L    + D   +     +++L  + + D          L  E+   ++ 
Sbjct: 181 LIDYLTPMRDQL----SKDSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     +  +++                              I + +VRGL+YY
Sbjct: 228 YLDEESQAHFEAVKAMLEAL-----------------------DIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL++ +
Sbjct: 265 NHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMII 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    +        + SK     Q +R  G  AE      +    Q K
Sbjct: 317 EKQGLTLPIETEMD---VYLAVLGDGANSKALELVQAIRHQGFTAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     L I  G  E   G   IK+    +EL    ++  +       Q
Sbjct: 373 SADTFKAKLVITLGESEVEAGKAVIKNNRSRQELEVSFEDIMTNFANVSEQ 423


>gi|322386507|ref|ZP_08060134.1| histidine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269426|gb|EFX52359.1| histidine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 426

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 93/463 (20%), Positives = 171/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      + +  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPQESAKWQYLEEFARKTFKKYNYAEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +G +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYMGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS     DAE   M A   + +GI +    +             + 
Sbjct: 121 GRLREFHQIGVECFGSENPATDAETIAMAAQFFKEIGIGQVTLQLNSLGNAASRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L + L    + D   +     +++L  + + D +            Q   ++ 
Sbjct: 181 LIDYLTPLKDSL----SKDSQRRLEENPLRVLDSKEKEDKA---------AVAQAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + ++    +  +++                              I++ +VRGL+YY
Sbjct: 228 FLDEESQEHFAAVRSMLESL-----------------------GVPYVINTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E                  ++  GGRYDGLV  F G   PA GF +G+ RL++ L
Sbjct: 265 NHTIFEFTT--------DVAGSELTICAGGRYDGLVDYFGGPETPAFGFGMGMERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +   ++         +          +        Q LR  G  AE      +    Q K
Sbjct: 317 EKQGAAL---PFETGLDAYIAVLGEAANRSALELVQALRNQGFAAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD       I  G  E     + +K+    +E+   +   + 
Sbjct: 373 SADAFRAKTIITLGESEIESNQVTVKNNETRQEVVVGLNQVQE 415


>gi|323526577|ref|YP_004228730.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383579|gb|ADX55670.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 446

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 98/498 (19%), Positives = 193/498 (38%), Gaps = 64/498 (12%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK   +    +G  D   ++  +      +++++  +YG+  I TP++E++    + + +
Sbjct: 5   KKKLDKLSGVKGMNDILPQDAGLWEFFETTVKSMLRSYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I             
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHR 184

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +   +K  + L      D   +     +++L  +                ++    +
Sbjct: 185 VELIAYLEKHMDVLD----EDAKRRLYTNPLRVLDTKN---------PALQEVAQNAPKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +       L  ++K                         +    I+  +VRGL+
Sbjct: 232 IDFLGAESRAHFEGLQRILKAN-----------------------NIPFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKATAACGWAMGIERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NF 417
            LK  +       E     +  +     +  +  +  + LR  G+   +   +     +F
Sbjct: 321 LLKEEQLVP----EDEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSADGQSASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q+K AD      A++ G  E + G + +K L              S    +  Q  +P
Sbjct: 377 KSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD-----------TSANGGKSEQHNVP 425

Query: 478 ISELVSTVKKILQENKEE 495
             +L   +   +    E+
Sbjct: 426 AEDLTEFLINAMVATAED 443


>gi|150002948|ref|YP_001297692.1| histidyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|294776608|ref|ZP_06742077.1| histidine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|166227944|sp|A6KXA6|SYH_BACV8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|149931372|gb|ABR38070.1| histidyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|294449523|gb|EFG18054.1| histidine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 454

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 143/481 (29%), Positives = 217/481 (45%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR+++  +G+  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFNTIRDVFHLFGYQQIETPSMENLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFNGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEISF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS++   + E+  M+       G+    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELVQMIDRVFGKFGV---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL+ V   L         
Sbjct: 178 VSIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLENVNAELA-------- 224

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  +  E ID +     LS   E+ +  L  ++  + AG KG  E   I + V   
Sbjct: 225 ----SKGIPQEAIDKLQPIILLSGSNEEKLETLKTVLATSEAGLKGVEESEFILKTVSAL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G  S  +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 GVKS-EVELDLTLARGLNYYTGAIFEV---------KALDVQIGSISGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +   G S G  R+   L  L+           +L           +        +R 
Sbjct: 331 MDGMSGVGISFGADRIFDVLNQLDLYPKEAVNGTELLFVNFGDKEA--AYCLPILTKVRE 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AG+RAE++  +SK    Q+ YA+ +  P   I G  E + G L +K++  G++       
Sbjct: 389 AGVRAEIYPDASK-MKKQMGYANDKQIPFVAIVGENEMNEGKLTLKNMTTGEQSLVTPDE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|254518565|ref|ZP_05130621.1| histidyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912314|gb|EEH97515.1| histidyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 415

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 97/462 (20%), Positives = 189/462 (40%), Gaps = 56/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D   ++    + +   +R++ ++YG   I TP+ E+++   + + +  D 
Sbjct: 1   MEIQAPKGTKDMLPQDAYKWHYVEGVLRDVSKSYGVREIRTPMFEHTELFLRGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + I+L+ + TAP  R   EN       P + Y I P FR E    GR
Sbjct: 61  VQKEMYTFNDKGDRSITLKPEGTAPTVRAFIENRLFNEAQPTKLYYIIPCFRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
            RQF Q  V+  GS   + DAE+  +  ++L+ +G+K        +   K      E + 
Sbjct: 121 LRQFHQYGVEVFGSKEASIDAEVISLAMESLKKLGLKSLSLNINNLGCPKCRPKYNEALK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            + ++  +    +        +F    +++L  + ++          N  ++   I++ +
Sbjct: 181 KYLEENYDNLCGIC-----KTRFEKNPMRILDCKEKS---------CNEITKHAPIILDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  + +    E+   +                            + K+   IVRGL+YYT
Sbjct: 227 ICEECDSHFTEVKNYLDAL-----------------------KIQYKVDPGIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             ++E +                +V GGGRYD L+    G  +PA GF +G+ RLI+ L+
Sbjct: 264 KTIFEILNDD------------FTVCGGGRYDKLIEEIGGPEMPAVGFGLGLERLIMTLE 311

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                   I   G V +        + +   +    LR  GI+ E+     ++   ++KY
Sbjct: 312 KEGI---EIPNEGVVDLYIGARGEAAKTSAFVLANKLRAIGIKTEINH-MGRSIKAEMKY 367

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++       I G  E     L++K ++ G++    + N E 
Sbjct: 368 ANKIGSAFTTILGDDELQNKTLKLKRMSDGEQFEVSLDNIEE 409


>gi|311746112|ref|ZP_07719897.1| histidine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126576332|gb|EAZ80610.1| histidine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 455

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 150/476 (31%), Positives = 230/476 (48%), Gaps = 54/476 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  LP+G  D    ++  RN IL++I++ ++ +G+  IETP +E  ++L GK+  + D  
Sbjct: 3   KPGLPKGTRDFGPVKMARRNFILNTIKDTFQLFGYQQIETPAMENLNTLTGKYGDEGD-- 60

Query: 67  NKGVFSLQDDDG---------------------QWISLRYDLTAPLARYVAENFDTIVFP 105
            + +F + +                            LRYDLT P AR+V  N + + FP
Sbjct: 61  -QLLFKILNSGDFLKKVESKDIEAGPLATLPKVSEKGLRYDLTVPFARFVVMNRNELTFP 119

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
            + ++I PV+R ++   GR+R+F QCD D VG+ +   +AE+ +M+      +  K NDY
Sbjct: 120 FKRFQIQPVWRADRPQKGRYREFYQCDADVVGTDSLVCEAEIILMIRRVFSQL--KLNDY 177

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I +NNRKIL GI E IG  G +       +  AIDK+DK G + VK+ L E        
Sbjct: 178 DIKVNNRKILTGISEAIGEAGKE-----APLCVAIDKMDKIGWEKVKIELAERGF----- 227

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               A+ + E+++ +V+ L  DLE  +  L E +  +  G KG  EL  +  ++ + G N
Sbjct: 228 ----ADQSVEKLEPLVN-LDTDLEGKISFLKEFLASSEVGLKGVAELEEMIIILGQMGAN 282

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
            + +     + RGL YYTG ++E          K   V  GSV GGGRYD L   F  + 
Sbjct: 283 LDHVDFDILLARGLSYYTGAIFEV---------KVNGVSIGSVSGGGRYDNLTGVFGLEG 333

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           V   GFS G+ RL   L+ L+        +    I  +  D   L         LR AGI
Sbjct: 334 VSGVGFSFGVDRLYDVLEELDLFPAE--SLDGTQILLIHFDQKGLDYALSVLPKLRNAGI 391

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +AE++  S+K    Q  YA ++  P   I G  E    ML +K+L  G + S  I+
Sbjct: 392 KAEIYPDSAK-IKKQFDYATKKGIPFVGICGDVEIENRMLALKNLESGNQESMSIE 446


>gi|18976636|ref|NP_577993.1| histidyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|32130125|sp|Q8U431|SYH_PYRFU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|18892205|gb|AAL80388.1| histidyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 432

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 117/462 (25%), Positives = 206/462 (44%), Gaps = 36/462 (7%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  +G  D   +E+  R  + + IR  +E YGF  + TP +EY+        +E    K
Sbjct: 2   IERVKGTRDFLPEEMVKRRWVFERIRERFETYGFKEVLTPTMEYTKLFELRSGEE--VVK 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++ +D  G+ +SLR D+T+ +AR     F T   P + Y I  +FR E+   GR+R+F
Sbjct: 60  QLYAFKDKGGRDVSLRPDMTSSVARLYVNMFQTAPKPIKWYYIANMFRYEEPQSGRYREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +GS    ADAE+  +  ++  A G++  ++ + I +R +LD   + +G+  D 
Sbjct: 120 WQAGVELIGSDKVEADAEVIALFVESYLATGLR--EFTVNIGDRILLDEFAKMLGVKDD- 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                + ++R IDK DK   +     L E   D +G            I+ ++  ++I  
Sbjct: 177 -----IGLMRIIDKKDKLPQEDFINALKEFGLDKNG------------IEKVLELINIKG 219

Query: 249 E-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           +   +  L E +  +   +   N L  + +L+       + I+I   I RG +YYT  V+
Sbjct: 220 KPDEVLPLAEELFTSEVAKNEINRLYALIDLLEAY-EVKDWIRIDLGIARGFDYYTSIVF 278

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           EAI    +                 RYD L+  F G+  PATGF+IGI RLI  L++   
Sbjct: 279 EAIAPNDLGIGSIGGGG--------RYDNLIEVFGGKPTPATGFAIGIERLIPILEAKGL 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                       +  +                LR +GI+ E+ L   +     + YA++ 
Sbjct: 331 IPEVQIAPD---VYVVPIGERMKKVAIRIATSLRKSGIKTEIEL-MGRKLKKAMDYANKV 386

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                II G  +  RG++ ++D+  G++   +I +   + + 
Sbjct: 387 GVKKTIIVGEKDLERGVVTVRDMESGEQNEVKIDDIVEFMKN 428


>gi|298387439|ref|ZP_06996991.1| histidine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298259646|gb|EFI02518.1| histidine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 454

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 146/487 (29%), Positives = 217/487 (44%), Gaps = 61/487 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++        I    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSRFNI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL+ V   L E       
Sbjct: 178 VCIKINNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLENVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++  +  G KG  E   I   +   
Sbjct: 227 ------GISDEAIAKLQPIILLSGTNTEKLATLKSVLAASETGMKGVEESEFILGTLETM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           ++         S S        +R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTELMFVNFGDKEASFS--MSMLAKVRA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  ++K    Q+ YA+ ++ P   I G  E + G   +K++  G++    ++ 
Sbjct: 389 AGIRAEIFPDAAK-MKKQMSYANAKSVPFVAIVGENEMNEGKAMLKNMETGEQNLVSVEE 447

Query: 463 NESWREA 469
             +    
Sbjct: 448 LIAALRN 454


>gi|322374023|ref|ZP_08048557.1| histidine--tRNA ligase [Streptococcus sp. C150]
 gi|321276989|gb|EFX54060.1| histidine--tRNA ligase [Streptococcus sp. C150]
          Length = 426

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 97/473 (20%), Positives = 173/473 (36%), Gaps = 52/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      + +  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPADSAKWQYVENVARETFKKYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS     D E   M       +GIK    H+            +  
Sbjct: 121 GRLREFHQLGVECFGSKNPATDVETIAMAYQLFNTLGIKDVTLHLNSLGNTESR---QAY 177

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D L      L   D   +     +++L  + + D          L  E    ++ 
Sbjct: 178 RQALIDYLTPMRESLS-KDSQRRLDENPLRVLDSKEKEDK---------LAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +    E+  +++                         +    I + +VRGL+YY
Sbjct: 228 YLDEESQAHFDEVRTMLESL-----------------------NIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I                ++  GGRYD LV  F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITTIDKSE--------LTICAGGRYDSLVEYFGGPETAGFGFGLGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +    + +    +      S++  K     Q +R  G +AE      +    Q K
Sbjct: 317 DKQGITLPVEEGLD---VYIAVLGSEANGKALELAQAIRHQGFKAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            AD       I  G  E   G + +K+    +E++   +       A + Q+ 
Sbjct: 373 SADAFKAKTVITLGESELESGQVSVKNNTTREEVTVSFEELTENFAAVLDQLE 425


>gi|224025678|ref|ZP_03644044.1| hypothetical protein BACCOPRO_02418 [Bacteroides coprophilus DSM
           18228]
 gi|224018914|gb|EEF76912.1| hypothetical protein BACCOPRO_02418 [Bacteroides coprophilus DSM
           18228]
          Length = 454

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 142/505 (28%), Positives = 222/505 (43%), Gaps = 79/505 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I D+IR ++  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFDTIREVFYLYGFQQIETPSMENLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGLTDEELLSRNAARLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + ++I PV+R ++   GR+R+F QCD D VGS++   + E+  M+       GI    
Sbjct: 121 PFKRFQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELVQMIDTVFNRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L         
Sbjct: 178 VSIKVNNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNAELA-------- 224

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +   + +     + +  L +++ G+  G KG  E   I   V   
Sbjct: 225 ----SKGISEEAIAKLQPIIQLKGTNAEKLATLKQVLAGSETGLKGVEESEFILHAVE-G 279

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
            +  + +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 280 LHVKSEVELDLTLARGLNYYTGAIFEV---------KALDVQIGSISGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +   G S G  R+   L  L+           +L           +         R 
Sbjct: 331 MDGMSGVGISFGADRIYDVLNQLDLYPKEAVNGTQLLFVNFGEAEA--AYVLPVLMQARE 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE++  S+K    Q+ YA+ +N P   + G  E + G + +K++  G++       
Sbjct: 389 AGIRAEIYPDSAK-MKKQMGYANSKNIPFVALVGETEMNEGKVTLKNMTTGEQT------ 441

Query: 463 NESWREARVAQITIPISELVSTVKK 487
                        +   EL++ ++K
Sbjct: 442 ------------LVTPEELIAAIRK 454


>gi|15231337|ref|NP_190196.1| ATHRS1 (HISTIDYL-TRNA SYNTHETASE 1); histidine-tRNA ligase
           [Arabidopsis thaliana]
 gi|3659909|gb|AAC61600.1| histidyl-tRNA synthetase [Arabidopsis thaliana]
 gi|7798998|emb|CAB90937.1| histidyl-tRNA synthetase [Arabidopsis thaliana]
 gi|15810389|gb|AAL07082.1| putative histidyl-tRNA synthetase [Arabidopsis thaliana]
 gi|21436315|gb|AAM51327.1| putative histidyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332644592|gb|AEE78113.1| Histidyl-tRNA synthetase 1 [Arabidopsis thaliana]
          Length = 486

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 114/460 (24%), Positives = 207/460 (45%), Gaps = 38/460 (8%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+    P+G  D P +++R+RN + +  + +   YG++ ++ P+LE      +   +E 
Sbjct: 65  KKIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLYGYEEVDYPVLETEALFIRKAGEEI 124

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           R    ++  +D   + ++LR +LT  LAR V +   ++  P + + IG  +R E+   GR
Sbjct: 125 RD--QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAIGQCWRYERMTRGR 182

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q ++D +G    TA+AE+   +    + +GI  +D    +++RK+L  +L+K G+
Sbjct: 183 RREHYQWNMDIIGVPQVTAEAELISSIVTFFKRIGITASDVGFKVSSRKVLQELLKKYGV 242

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D        V   IDK++K  +  +K  LG               ++ + I+ ++  L
Sbjct: 243 PED----LFGRVCIIIDKIEKIPIDEIKKELGFT------------GISEDAIEQLLQVL 286

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S+     + ++           +   +L  +  L  K GY S  I+  +++VRGL YYTG
Sbjct: 287 SVKSLDDLEDI------IGGAGEAIADLKQLFSLAEKFGY-SEWIQFDASVVRGLAYYTG 339

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E            +     ++ GGGRYD L+S + G + PA GF  G + ++  LK 
Sbjct: 340 IVFEGF---------DRKGKLRAICGGGRYDRLLSTYGGDDFPACGFGFGDAVIVELLKE 390

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +      +E   V       D D           LR  G   ++ L  SK      K A
Sbjct: 391 KDLLPELGQE---VENIVCALDKDLQGAAATVATALRDKGQTVDLVL-ESKPLKWVFKRA 446

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            R N    ++ G  E   G + +K L+ G++   ++ + E
Sbjct: 447 ARVNARRLVLVGKTEWEDGSVSVKVLSSGEQFQVKLSDLE 486


>gi|315224549|ref|ZP_07866376.1| histidine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314945570|gb|EFS97592.1| histidine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 458

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 142/480 (29%), Positives = 231/480 (48%), Gaps = 52/480 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D    E+  RN I+++I+N +  +GF PIETP  E  D+L GK+  + D  
Sbjct: 5   KPSIPKGTRDFSPAEVAKRNFIINTIKNTFNAFGFQPIETPSFENYDTLMGKYGEEGDRL 64

Query: 65  ---RPNKGVFS-------LQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCR 107
                N G F+        +  + Q ++       LRYDLT P ARYV ++ + + FP +
Sbjct: 65  IFKILNSGDFTQGVKQDDWETKNTQKLTPQISEKALRYDLTVPFARYVVQHQNELTFPFK 124

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GRFR+F QCD D VGS++   + E   +      A+ +K     I
Sbjct: 125 RYQIQPVWRADRPQKGRFREFYQCDADVVGSTSLWQEVEFVQLYDTVFTALNLKG--VTI 182

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL G  E IG    DKL +  + L   DKLDK G +GV   + E          
Sbjct: 183 KINNRKILSGFAEVIG--ESDKLIDFTVAL---DKLDKIGEEGVIKEMIER--------- 228

Query: 228 KGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++ E I  +    ++     + +  L E++K +  G KG  E+  I++ + +    
Sbjct: 229 ---GISHEAISKLQPIFTLKGALAEKLTALKEILKTSEMGLKGIEEVEFIAQQIERLTLQ 285

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +  + +  T+ RGL YYTG ++E              V  GS+GGGGRYD L S F  + 
Sbjct: 286 TAILDLDVTLARGLNYYTGAIFEVTAPAG--------VQMGSIGGGGRYDDLTSIFGLKG 337

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G+ R+ + ++ L     ++     VL     ++    S      + LR  G 
Sbjct: 338 ISGIGISFGLDRIGLVMEELNLFPESLSNSIEVLCINFGNNEALQS--MKLLKELRKLGK 395

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           RAE++  ++K    Q++YA++R+ P  ++ G  E ++    +KD+ KG +   +      
Sbjct: 396 RAELYPDAAK-IKKQMEYANKRSIPFVVMIGESELTKNTFVLKDMLKGTQKEYKFNEVNE 454


>gi|187928153|ref|YP_001898640.1| histidyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|187725043|gb|ACD26208.1| histidyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 450

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 106/510 (20%), Positives = 195/510 (38%), Gaps = 86/510 (16%)

Query: 1   MGKKTKLRAEL---PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M    K R +     +G  D    +  +     +++R++   YG+  I TP++E +    
Sbjct: 11  MSDTQKQRVQKIAGVKGMNDLLPADAPLWEHFDNAVRSMLRAYGYQQIRTPIVEQTQLFV 70

Query: 58  KFLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
           + + +  D   K +++  D  +G+ +++R + TA   R V E+      P R +  GP+F
Sbjct: 71  RGIGEVTDIVEKEMYTFTDALNGEQLTMRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMF 130

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHI 167
           R+E+   GR+RQF Q  V+ +G +    DAE+ +M     + +G                
Sbjct: 131 RHERPQRGRYRQFHQVGVEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEE 190

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              +R  L   LE      D+            D   +     +++L  +          
Sbjct: 191 RAAHRADLIKYLEGFQDVLDE------------DGKRRLYTNPLRVLDTKNPALQDMAAG 238

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                       ++ +L  +       + +L+K                         + 
Sbjct: 239 ---------APKLLDYLGDESRAHFEGVQKLLKAN-----------------------NI 266

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
              I+  +VRGL+YY   V+E            K    G+V GGGRYD L+ +  G+  P
Sbjct: 267 PFIINPRLVRGLDYYNLTVFEWTT--------DKLGAQGTVAGGGRYDPLIEQIGGKPAP 318

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           A G+++G+ R+I  L+  +       E     +  +    ++  +  +  + LR AG+  
Sbjct: 319 ACGWAMGVERIIELLREEKLEP----EAQGCDVYIVHQGDEAQVQALIAAERLRDAGLDV 374

Query: 408 EMFL---GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            +     G + +F +Q K AD      A+I G  E ++G+ QIK L              
Sbjct: 375 ILHASPEGRNGSFKSQFKRADASGASYAVIIGDDEVTQGVAQIKPLR------------- 421

Query: 465 SWREARVAQITIPISELVSTVKKILQENKE 494
                  AQ T+P  +LV  +   +  N +
Sbjct: 422 -GDPTADAQQTVPSDQLVDRLIDAMVANND 450


>gi|66361245|ref|XP_627292.1| histidyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
 gi|46228681|gb|EAK89551.1| histidyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
          Length = 977

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 130/493 (26%), Positives = 227/493 (46%), Gaps = 46/493 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R ++P+G  D   +++ I+N +   IR +Y  +G   I+TP+ E  D+L     ++   +
Sbjct: 504 RPKIPKGTQDVTPQKMAIKNLVFGMIREVYRAHGAVEIDTPVFELKDTLLGKYGED---S 560

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRF 125
           K ++ L+D  G+ +SLRYDLT PLARY+A +        + Y+IG V+R ++     GRF
Sbjct: 561 KLIYDLKDQGGEQLSLRYDLTVPLARYIATSGLD---HLKRYQIGKVYRRDEPQMARGRF 617

Query: 126 RQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           R+F QCD+D V    +  AD+E+  +    L +       + I IN+R++LDGILE  G+
Sbjct: 618 REFYQCDLDIVGHYDSMVADSEIIKIATQVLSSFSNWIGQFMIKINHRQLLDGILEISGV 677

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +    +      +IDKLDK   + V+            +      L+   +D + S +
Sbjct: 678 PNE----KFKTTCSSIDKLDKEPWESVR-----------NEMINIKGLSESTVDKIGSII 722

Query: 245 SIDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            +        + +    E+++      K   EL  + +  +      N +    ++ RGL
Sbjct: 723 QLKGTPFDVLEKIKSNQEMMENKNIM-KALEELETLFKYTKSCNNCINYLSFDLSLARGL 781

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG +YEA+L    +N        GS+  GGRYD L+  F  +N+PA GFS+G+ R++
Sbjct: 782 DYYTGVIYEAVLISNELN-------VGSIAAGGRYDQLIGMFSQKNIPAVGFSVGVERIM 834

Query: 360 VALKSLE---SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++       + N+  +     +   +     L        +L    I  E+ L  +  
Sbjct: 835 SIIEKKFEACKTHNHSSKGSFTDVLICNVGDSFLEYRFKIASLLWDNHISCEISLTGNGK 894

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              QL YA   N P  II G  E  +  +Q K +             E+ +   V+   +
Sbjct: 895 LRKQLDYASNNNIPYCIIIGESEALKETVQFKFIHN------NQSETETEQTTSVSSQEV 948

Query: 477 PISELVSTVKKIL 489
            I++LV  ++ ++
Sbjct: 949 HINDLVPHIQSVI 961


>gi|300088460|ref|YP_003758982.1| histidyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528193|gb|ADJ26661.1| histidyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 418

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 94/462 (20%), Positives = 174/462 (37%), Gaps = 52/462 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           +  + PRG  D   +E      + D    I   YG+  I+TP  E +    + +  + D 
Sbjct: 1   MDYQSPRGTQDILPEEQAWWAYVQDRAVGIAARYGYSRIDTPTFEDARLFVRTVGEETDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G  ++LR + TAP+ R   ++   +   P + + +  +FR ++   GR
Sbjct: 61  VGKEMYTFADRGGSDLTLRPEGTAPVCRAYIQHGMGSRPKPVKLFYLASIFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIG 183
           +R+  Q   + +G     ADAE+  +  +    +G+      +  I         L  + 
Sbjct: 121 YREHHQFGFELIGDGDAAADAEVIDLAWNFYRELGLSTLPVQLNSIGCPDCRHSYLAAL- 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                +     I  R  D   ++    ++  L + +    G    GA  +++       +
Sbjct: 180 ----REYYATDIEARCADCRVRYEKNPLR--LLDCKRPECGAVADGAPHSAD-------Y 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D       L +L+       +  + L                       VRGL+YY 
Sbjct: 227 LCDDCRTHFERLRDLLAAVGIPFEINHRL-----------------------VRGLDYYR 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E                  ++GGGGRYDGL+ +  G+  PA GF+ GI R+I+ LK
Sbjct: 264 RTVFEIQPLEE--------GAQSTIGGGGRYDGLIEQLGGEPTPAVGFATGIERVILNLK 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
               +   +              +D+ +        LR AG+      G  ++   QL+ 
Sbjct: 316 RQNIAVPGLPAP---RFFLAWLGADAATPAFALGARLRRAGLTVNWSPG-PRSLKAQLRL 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A        +I G  E + G + ++D+A  ++ S  +     
Sbjct: 372 ASSMGAAYTLILGENELAEGRVVLRDMAGSEQRSLSLDGLAE 413


>gi|152980083|ref|YP_001353816.1| histidyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|151280160|gb|ABR88570.1| histidyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 449

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 100/489 (20%), Positives = 193/489 (39%), Gaps = 74/489 (15%)

Query: 1   MGKKTKL-RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M    K  +    +G  D    +  +     +++  + ++YGF  I TP++E +    + 
Sbjct: 1   MSDTKKTEKIVGVKGMNDILPADAPLWELFENTVHTVLKSYGFQQIRTPIVEPTALFARG 60

Query: 60  LPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           L +  D   K ++S  D  +G  ++LR + TA + R   E+  T   P R +  GP+FR+
Sbjct: 61  LGEVTDIVEKEMYSFTDSMNGDQLTLRPECTAGVVRAALEHNLTYDGPKRLWYAGPMFRH 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGI 169
           E+   GR+RQF Q   + +G +    DAE+ MM     + +G            +     
Sbjct: 121 ERPQRGRYRQFHQIGAEAIGFAGPDIDAELIMMCQRLWDDLGLQDVRLELNSIGNAEERN 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L    EK     D +  +RL                +++L  +  T         
Sbjct: 181 KHRADLIAYFEKNADLLDTEAQKRLHS------------NPLRILDTKNPTMQDM----- 223

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     ++ +L  +       + ++++                       +N+   
Sbjct: 224 ----VNAAPKLLDYLGEESRAHFEGVQKILR-----------------------HNAIPF 256

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRG++YY   V+E +          +    G+V GGGRYD LV  F G+  PA 
Sbjct: 257 TINPRLVRGMDYYNRTVFEWVT--------DQLGSQGTVCGGGRYDPLVEMFGGKPTPAC 308

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++G+ RL+  +K+               +  +    ++  +  +  + LR AG+   +
Sbjct: 309 GFAMGVERLLELMKASG----EQFAPNQCDVYIVHQGEEAQLQASVVAERLRDAGLDVVL 364

Query: 410 FLGSS---KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK----GKELSREIKN 462
              ++    +F +Q+K AD      A+I G  E ++G   +K++      G + S   + 
Sbjct: 365 HCAAATGIGSFKSQMKRADGSGAAYAVIIGEDEIAQGTAVVKEMRNAEAAGNQASVPFEG 424

Query: 463 NESWREARV 471
              +   ++
Sbjct: 425 IADYLVDQI 433


>gi|87300561|ref|ZP_01083403.1| histidyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284432|gb|EAQ76384.1| histidyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 450

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 98/445 (22%), Positives = 181/445 (40%), Gaps = 46/445 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   +++ +   +    R+ +   G   I TPLLE ++   + + +  D  
Sbjct: 26  KLQSLRGMVDLLPEQMPLWQHVEALARSQFRRAGLREIRTPLLEVTELFARGIGEATDVV 85

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D   +  +LR + TA + R   ++      P R +  GP+FR E+   GR R
Sbjct: 86  GKEMYTFLDRGERSCTLRPEGTASVVRAALQHGLLSQGPQRLWYTGPMFRYERPQAGRQR 145

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  ++ +G +   +DAE   +  D L  +G               L   L  +G   
Sbjct: 146 QFHQAGIECLGFADPRSDAEAIAIAWDLLSELG------------VGGLALELNSLGDPA 193

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D       +V           L+  + LL       S +      L       ++   + 
Sbjct: 194 DRAAYRTALVAW---------LEERRELLDA----ESRERITTNPL------RILDSKNA 234

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + +  + E   L+      +        +   +          +++  +VRGL+YYT   
Sbjct: 235 ETQAVLAEAPLLIDSL--SDPSRERFEAVRRCLEA---LEIPYQLNPRLVRGLDYYTHTA 289

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E            +     +V GGGRYDGL+ +  G    A G++IG+ RL++     +
Sbjct: 290 FEIT--------SSQLGAQATVCGGGRYDGLIEQLGGAPTAAIGWAIGLERLVLLCAQRD 341

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           ++   +  +    +  +     +  +  + ++ LR AG   E+ L  S  FG QLK ADR
Sbjct: 342 AAEGALPTVPVPDVYVVSRGEAAERQALVLSRQLRQAGQMVELDLTGSA-FGKQLKRADR 400

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLA 451
              P A++ G GE  +G++ +K+L 
Sbjct: 401 SGAPWAVVIGEGEAEQGVVLLKNLR 425


>gi|238785322|ref|ZP_04629311.1| Histidyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238713775|gb|EEQ05798.1| Histidyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 433

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 96/470 (20%), Positives = 182/470 (38%), Gaps = 68/470 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + + +  D  
Sbjct: 13  NIQAIRGMNDYLPADTAIWQRIESILKQVLAGYGYSEIRMPIVEQTPLFKRAIGEVTDVV 72

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+   GR+R
Sbjct: 73  EKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYERPQKGRYR 132

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDG 177
           QF Q   +  G      DAE+ ++ A    A+G                   + R+ L  
Sbjct: 133 QFHQLGAEVFGLQGPDIDAELILLTARWWRALGISEHVQLELNSIGSLDARADYREALVT 192

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE+     D+            D   +     +++L  +                    
Sbjct: 193 FLEQHVEVLDE------------DCKRRMYSNPLRVLDSKN---------PDVQQLLNDA 231

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  +L  + ++    L EL+                          S    ++  +VR
Sbjct: 232 PKLSDYLDEESKQHFAGLCELLD-----------------------QASIPYTVNERLVR 268

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ R
Sbjct: 269 GLDYYNRTVFEWVTNS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLER 320

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           L++ ++++ +   + +    V +  +    ++ S   +  + LR A   ++     G   
Sbjct: 321 LVLLVQAVNA---DFQVPATVDVYVISSGQNTQSAAMLLAESLRDAMPTLKLMTNYGGG- 376

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           N   Q   AD+    +A++ G  E +   + +KDL  G++ +    +  +
Sbjct: 377 NVKKQFTRADKWGASVALMLGESEVAADQVVVKDLRNGEQETLAQADVAA 426


>gi|302874941|ref|YP_003843574.1| histidyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302577798|gb|ADL51810.1| histidyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 415

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 92/458 (20%), Positives = 177/458 (38%), Gaps = 54/458 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + + +R     YG   I TP  E+++   + + +  D 
Sbjct: 1   MLVQAPKGTKDMLPGIAYKWQYLEEKMRKTAAEYGAREIRTPAFEHTELFIRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ ++L+ + TA   R   E        P + Y   PVFR E    GR
Sbjct: 61  VQKEMYTFEDKGGRSVTLKPEGTASAVRAFIEGSLFNDAQPTKMYYFTPVFRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q  V+  GS   + D+E+  +    L  +G+   + +I          I      
Sbjct: 121 LREHHQFGVEVFGSQDASIDSELISLALRVLTELGVNNLELNINSIGCPNCRAIYNAALK 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
               K  + L          +F    +++L  +              + +     ++ +L
Sbjct: 181 EFLKKNYDDLCPT----CKSRFEKNPMRILDCKEEK---------CKIINASAPEILDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + +     L   +                            + KI+  IVRGL+YYT 
Sbjct: 228 DDECKSHFEALKAYLTA-----------------------MDIKYKINPRIVRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +                +V GGGRYD L+++  G ++PA GF +G+ RLI+ L+ 
Sbjct: 265 TVFEILNNN------------FTVCGGGRYDNLINQVGGPSMPAVGFGMGMERLILTLEE 312

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  I     + +        S  +       LR  G++ E+    +K+   Q+KYA
Sbjct: 313 SNI---EIPRTPYIDLYIGAMGDSSKIESLKLAYNLRKLGLKCEIDH-MNKSVKAQMKYA 368

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           ++ +    +I G  E +   +++K ++ G++L   +++
Sbjct: 369 NKIDASYTLILGDDELATKKVKLKRMSDGEQLEINLED 406


>gi|295676902|ref|YP_003605426.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436745|gb|ADG15915.1| histidyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 446

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 98/498 (19%), Positives = 192/498 (38%), Gaps = 64/498 (12%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK   +    +G  D   +E  +      +++++  +YG+  I TP++E++    + + +
Sbjct: 5   KKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ +M     + +G+      I             
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIIMCQRLWDDLGLTGIKLEINSLGLAEERAAHR 184

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +   +K  + L      D   +     +++L  +                ++    +
Sbjct: 185 VELIAYLEKHMDVLD----EDAKRRLYTNPLRVLDTKN---------PALQEVAQNAPKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +       L  L+K                              I+  +VRGL+
Sbjct: 232 IDFLGEESRAHFEGLQRLLKANNL-----------------------PFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NF 417
            LK  +       E     +  +     +  +  +  + LR  G+   +   +     +F
Sbjct: 321 LLKEEQLVP----EDEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSADGQSASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q+K AD      A++ G  E + G + +K L                   +  Q  +P
Sbjct: 377 KSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD-----------TQAHGGKNEQQNVP 425

Query: 478 ISELVSTVKKILQENKEE 495
             +L   +   +  + E+
Sbjct: 426 AEDLTEYLINAMVASAED 443


>gi|16331375|ref|NP_442103.1| histidyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501002|sp|Q55653|SYH_SYNY3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|1001546|dbj|BAA10173.1| histidyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 447

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 102/492 (20%), Positives = 196/492 (39%), Gaps = 75/492 (15%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    E      +    ++I +   +  I TP+ E +    + + +  D   
Sbjct: 4   IQAIRGTRDILPPETNYWQWVEAIAKSILDRALYQEIRTPIFEQTSLFERGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVA-ENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++S  D   + I+LR + TA + R    +N        R +  GP+FR E+   GR R
Sbjct: 64  KEMYSFTDRGDRPITLRPEGTAGVVRAYIEQNLQAAGGVQRLWYTGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKILDGILEKI 182
           QF Q  V+ +GS+   AD E+  +  D L+A+G+       +      +R+     L   
Sbjct: 124 QFHQLGVEVLGSADPRADVEVIALGTDILKALGLSNLSLALNSVGNGGDRQRYREALIAY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                 +L+         D  D+     +++L  + +               +    ++ 
Sbjct: 184 LTPFKAELD--------PDSQDRLERNPLRILDSKAKRTQE---------IVQDAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L +D ++   ++ +L+                              +++ T+VRGL+YY
Sbjct: 227 HLGVDSQRHFDQVQQLLTNLGIA-----------------------YQLTPTLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E         +        +V GGGRYDGLV+   G   PA G+++G+ RLI+ L
Sbjct: 264 THTAFEI--------QSSDLGAQATVCGGGRYDGLVAELGGPVTPAVGWAMGLERLIILL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + + +      +     +  +     +  +  +  Q LR  G+   + L +S  FG Q K
Sbjct: 316 QQMATPPAPSPD-----LYLISKGEKAEPQALILAQKLRNQGLAVALDLSASA-FGKQFK 369

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            AD+      ++ G GE + G +Q+K LA   + + ++++                   +
Sbjct: 370 RADKSGAIACLVLGDGEIATGTVQLKWLADKAQETLQLQDLMGN---------------I 414

Query: 483 STVKKILQENKE 494
           + +K+ L  ++E
Sbjct: 415 TELKQRLAGHRE 426


>gi|331701367|ref|YP_004398326.1| histidyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128710|gb|AEB73263.1| Histidyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 435

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 94/461 (20%), Positives = 179/461 (38%), Gaps = 49/461 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G AD    E +  N + ++ R ++++Y +  I TP+ E  D   +   D  D 
Sbjct: 1   MRYQRPKGTADILPGEAQKWNYVEETARMLFDDYRYQEIRTPMFENFDVFSRTSGDTSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + +SLR + TA + R   EN         P + + +G +FR E+   
Sbjct: 61  VTKEMYDFNDKGDRHMSLRPEGTAGVVRAFVENKLYGPEHPRPVKVFYMGSMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E+  M  D L+  G+      I     K       + 
Sbjct: 121 GRQREFHQIGVEAFGSNEPELDVEVIAMGMDLLKHFGLSGLRLEINSLGDKASRDAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   D   + L    + D   +     +++L  + + D             +    ++ 
Sbjct: 181 LIDYLDPHFDEL----SDDSKVRLHKNPLRVLDSKDKRDQE---------IVKGAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D +K   ++  L++                         +    +   +VRGL+YY
Sbjct: 228 YLNEDSQKHFDKVKHLLESL-----------------------NIPYVVDPDMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E ++    + E        ++  GGRY+GLV +  G  +P  GF +G+ RL++ +
Sbjct: 265 NHTIFEIMVDSKALGEGYT-----TICAGGRYNGLVEQLGGPEMPGIGFGLGMERLMLLM 319

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++          +  +    +     +        Q LR  G  A+      +    Q K
Sbjct: 320 EAQGV---KFPVLDQLDAYVVGIGEQTSVLTLQIVQALRADGFAADRDY-LDRKPKAQFK 375

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            A++ N    I  G  E  +    +K +  G E+S  +   
Sbjct: 376 TANKLNAQYTITIGESELEKKTANVKQMRTGTEVSVPLAEI 416


>gi|222055711|ref|YP_002538073.1| histidyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221565000|gb|ACM20972.1| histidyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 415

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 88/457 (19%), Positives = 169/457 (36%), Gaps = 56/457 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +     +GF D    E+     I  + R I+  YGF  I  P+LE ++   + + D  D 
Sbjct: 1   MSITGIKGFNDILPGEVEKWQHIEAAARRIFGLYGFSEIRVPILEKTELFCRSIGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K ++S  D     +++R + TA + R   E+   +  P  + Y +GP+FR E+   GR
Sbjct: 61  VEKEMYSFVDKGENKVTMRPEGTASIMRAFIEHKLYVADPVAKLYYMGPMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           +RQF Q   +  G +    DA++  M+      +G+         +   +      + + 
Sbjct: 121 YRQFHQIGAEVTGIADPKVDAQVLTMLCHFFAELGLTEPHLQINSLGCPECRPKYRQVLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                ++ +        D   +     ++ L  +           G    +E    ++ +
Sbjct: 181 DFLKSRIGKL-----CDDCRRRIDTNPLRALDCKA---------AGCKEATEGAPSVLDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D      +    ++                              I++ +VRGL+YYT
Sbjct: 227 LCHDCNDHFAKTRCHLES-----------------------VGTSYSINTRMVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                +V  GGRYDGL+S   G ++P  GF++G+ R+ + L 
Sbjct: 264 RTTFELVT--------GLLGSQSAVAAGGRYDGLISDLGGPSLPGIGFAMGVERVALLLA 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             +                      +  +       L+  G   EM   + K+  +Q++ 
Sbjct: 316 EKDFRKRP-------DFFIAALGETAQEEAFRLMSGLQQKGCSVEMDF-AGKSLKSQMRR 367

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           AD+ N    +I G  E  +G   +K++  G +    +
Sbjct: 368 ADKFNAHFTLILGEDELVKGTAALKNMDSGTQTDVRL 404


>gi|281425692|ref|ZP_06256605.1| histidine--tRNA ligase [Prevotella oris F0302]
 gi|281400279|gb|EFB31110.1| histidine--tRNA ligase [Prevotella oris F0302]
          Length = 454

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 140/478 (29%), Positives = 222/478 (46%), Gaps = 55/478 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+  RN I ++I+++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGPEEMAKRNYIFNTIKDVYALYGFQQIETPAMETLQTLMGKYGEEGDKL 63

Query: 65  ---RPNKGVF--SLQDD--DGQ----------WISLRYDLTAPLARYVAENFDTIVFPCR 107
                N G +   + D     +             LRYDLT P ARYV  + + +  P +
Sbjct: 64  LFKILNSGDYLNKVTDKELSERNPLHLASKLCEKGLRYDLTVPFARYVVMHREELQLPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       G+      I
Sbjct: 124 RYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTKFGV---RVQI 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L            
Sbjct: 181 KINNRKILTGIAEVIG-----EADKIVDITVAIDKLDKIGLDNVNAELKAD--------- 226

Query: 228 KGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++ E I+ +   +S++   E  ++ + ++++G+  G KG  E   I + ++ +G N
Sbjct: 227 ---GISDEAIEKLQPIISLEGTNEDKLNTIAKVLEGSDVGLKGVEETKFILDALKTTGLN 283

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
            N I++  T+ RGL YYTG ++E          K      GS+ GGGRYD L   F    
Sbjct: 284 -NEIQLDLTLARGLNYYTGAIFEV---------KALDTPMGSITGGGRYDNLTGIFGMPG 333

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G  R+   L +L+           VL           +    +    R AGI
Sbjct: 334 LSGVGISFGADRIYDVLNALDLYPKEAVNATQVLFINFGEKET--AYCLPFVAKARKAGI 391

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           R E+F   +K    Q+ YA+ +N P  ++ G  E + G L +K++  G++    I   
Sbjct: 392 RTEIFPDKAK-MKKQMSYANAKNIPYVVLAGENEINEGKLMLKNMQTGEQTLITIDEL 448


>gi|237747710|ref|ZP_04578190.1| histidine tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229379072|gb|EEO29163.1| histidine tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 454

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 104/489 (21%), Positives = 193/489 (39%), Gaps = 74/489 (15%)

Query: 2   GKKTKLRAEL-PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
            K  K++  L  +G  D   ++  +   + +++ ++ ++YG++ I TP++E +    + L
Sbjct: 5   NKTKKVKKILGIKGMNDILPEDAPVWELLENTVESVLKSYGYERIRTPIVEETGLFARGL 64

Query: 61  PD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
               D   K ++S +D  +G  ++LR + TA + R V E+  T   P R +  GP+FR+E
Sbjct: 65  GAVTDIVEKEMYSFEDSLNGDQLTLRPESTAGVVRAVVEHNLTYNGPKRLWYSGPMFRHE 124

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQF Q   + VG      DAE+ ++     + +G            +      
Sbjct: 125 RPQRGRYRQFHQIGAEAVGFPGPDIDAELILLCQRLWDDLGLENIRLEINSIGNAGERNR 184

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           +R  L    E+     D+            D   +     +++L  +  T          
Sbjct: 185 HRADLIAYFEQHKGLLDE------------DAQRRLYSNPLRILDTKNPTMQDM------ 226

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    ++ +L  +       +  ++K                         +    
Sbjct: 227 ---VNAAPKLLDYLEKESLDHFEGVQRILKRN-----------------------NIPYT 260

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRG++YY   V+E I         ++    G+V GGGRYD L   F G+  P+ G
Sbjct: 261 INPRLVRGMDYYNRTVFEWI--------SEELGSQGTVCGGGRYDPLFEMFGGKPTPSCG 312

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F++G+ RLI  LK+        K      +       D+L +  +  + LR  G+   ++
Sbjct: 313 FALGMERLIELLKTQGDVNTTSKA----DVFIAHQGEDALPEAFVLAESLRNTGLDVIVY 368

Query: 411 LG---SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK----GKELSREIKNN 463
                S  +F  Q+K AD      A++ G  E   G   +K L       K+LS   +  
Sbjct: 369 CTAANSGGSFKAQMKRADESGAAFAVLIGEDEVKNGCASVKALRSDNTADKQLSVPFEKV 428

Query: 464 ESWREARVA 472
             +   ++A
Sbjct: 429 ADYLVDQIA 437


>gi|262161299|ref|ZP_06030410.1| histidyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262168792|ref|ZP_06036487.1| histidyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262022910|gb|EEY41616.1| histidyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262029049|gb|EEY47702.1| histidyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 412

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 101/462 (21%), Positives = 181/462 (39%), Gaps = 69/462 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             DC   +  +  ++   ++N+   YG+  +  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  ++LR + TA   R   EN        R + +GP+FR+E+   GR+RQF QC V
Sbjct: 61  EDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHERPQKGRYRQFHQCGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILEKIGL 184
           +  G      DAE+ MM A     +G                   N R  L   LE+   
Sbjct: 121 EVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARANYRTALIDYLEQYQN 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D+            D   +     +++L  +                      +  +L
Sbjct: 181 VLDE------------DCKRRMYTNPLRVLDSKN---------PDVQAILGDAPQLSDYL 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + ++    L EL+                               ++  +VRGL+YY  
Sbjct: 220 DAESKQHFAGLCELLDAA-----------------------GIEYTVNQRLVRGLDYYNR 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E I         +     G+V GGGRYDGLV +  G+  PA GF++G+ RL++ +++
Sbjct: 257 TVFEWIT--------ESLGSQGTVCGGGRYDGLVEQLGGKPTPAVGFAMGLERLVLMMET 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLK 422
           L ++         V +  +     ++       + LR    G+R     G   NF  Q K
Sbjct: 309 LGNTDVRRS----VDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVMTHFGGG-NFKKQFK 363

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            AD+    +A++ G  E +   + +KDLA G++ +       
Sbjct: 364 RADKVGAAIALVLGEDEVAAQTVVVKDLAGGEQNTVAQAEVA 405


>gi|94542963|gb|ABF33012.1| histidyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546851|gb|ABF36898.1| Histidyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 438

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 100/475 (21%), Positives = 177/475 (37%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 13  MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 72

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 73  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 132

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR R+F Q  V+  G++    D E   M    LE +GIK    H+       +R      
Sbjct: 133 GRLREFHQIGVECFGAANPATDVETIAMAYHLLEKLGIKDVTLHLNSLGSPESRSAYRQT 192

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L++        D   +     +++L  + + D          L  E+  
Sbjct: 193 LIDYLTPMRDQLSK--------DSQRRLDENPLRVLDSKEKEDK---------LAVEKAP 235

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +     +  +++                              I + +VRG
Sbjct: 236 SILDYLDEESQAHFEAVKAMLEAL-----------------------DIPYVIDTNMVRG 272

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL
Sbjct: 273 LDYYNHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERL 324

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++    +     EM    +        + SK     Q +R  G  AE      +   
Sbjct: 325 LMIIEKQGLALPIETEMD---VYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIK 380

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD     L +  G  E   G   IK+    +E+    ++  +       Q
Sbjct: 381 AQFKSADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFANISEQ 435


>gi|255325082|ref|ZP_05366188.1| histidine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297647|gb|EET76958.1| histidine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 429

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 100/483 (20%), Positives = 189/483 (39%), Gaps = 68/483 (14%)

Query: 1   MGKKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M KK + +A   P+G  D    +     ++  ++       GF  IE P+ E +    + 
Sbjct: 1   MSKKKQFQALSAPKGVPDYFPPQSAAFYKVRQTMVEQAHLSGFQHIELPIFEDTALFARG 60

Query: 60  LPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRN 117
           + +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR 
Sbjct: 61  VGESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRSVIEHNLDRGQLPVKLNYFGPFFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGI 169
           E+   GR+RQ  Q  V+ +G      DAE+  +   +  A+G            D +   
Sbjct: 121 ERPQAGRYRQLQQVGVEAIGVDDPALDAEVIALADRSFRALGLSGFRLELTSLGDRNCRP 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L K+ L  + +    +  LR +D                       +    
Sbjct: 181 AYREKLQKFLFKLDLDEETRHRAEINPLRVLDDK----------------RPEVQEQLAD 224

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L  + ++                           ++       ++ ++   G      
Sbjct: 225 APLMLDHLN---------------------------DECREHFETVTGMLDDMG---VAY 254

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   
Sbjct: 255 EINPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLSGI 306

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G+ +G+ R ++AL++   + + ++    V +  +   + +          LR AGI A+M
Sbjct: 307 GYGLGVDRALLALEAEGITLDGVES--RVDVFGVALGAAAKRTMTTLINDLRKAGISADM 364

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             G  +     +K ADR     A++ G  E   G + +KDLA  ++   ++ +  S    
Sbjct: 365 SFG-DRGLKGAMKGADRAGARFALVLGEQELENGTVALKDLAAHEQHDVKVSDLVSVLAR 423

Query: 470 RVA 472
            + 
Sbjct: 424 EMN 426


>gi|152987807|ref|YP_001346696.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166228597|sp|A6V0W1|SYH_PSEA7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|150962965|gb|ABR84990.1| histidyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 429

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 103/487 (21%), Positives = 196/487 (40%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++      +  +   + + YG+  I  P+LE+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPAWRYLERTFAGLLDGYGYSEIRLPILEFTELFARGI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D  +K +++  D +G+ +++R + TA   R V E+  +      + +  GP+FR E
Sbjct: 57  GEGTDVVDKEMYTFLDRNGESLTMRPEGTAGCVRAVLEHGLSGGGQVQKLWYTGPMFRYE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI---------KRNDYHIGI 169
           K   GR+RQF Q  V+         DAE+ ++     + +G+                  
Sbjct: 117 KPQKGRYRQFHQIGVEVFNLPGPDIDAELIILTWRLWQKLGMADAVTLQLNTLGSSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L++     D+            D   +     +++L  +   +++     G
Sbjct: 177 RYREALVAYLQERFEQLDE------------DSQRRMTTNPLRILDSK--VESTQALLVG 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A    + +D                           E+       +   +   G    R 
Sbjct: 223 APTLHDYLD---------------------------EESIAHFEGLKARLDAVGL---RY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I+  +VRGL+YY    +E +          K    G+V GGGRYDGLVS+F G+  P  
Sbjct: 253 EINQKLVRGLDYYCRTAFEWVT--------DKLGAQGTVCGGGRYDGLVSQFGGKPTPGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++G+ RL++ L++L+     +     + +      ++  +      + LR++  GIR 
Sbjct: 305 GFAMGVERLVLLLETLDVIPAELNRPADLYVCAFGEPAELAALALA--EQLRSSIPGIRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESW 466
            +  G+  +F +Q K AD+     A+I G  E +  ++  K L   G++ S         
Sbjct: 363 LVNAGAG-SFKSQFKKADKSGARYALILGEDEVANRVVGFKPLRDEGEQQSIAWDALPEH 421

Query: 467 REARVAQ 473
             A +AQ
Sbjct: 422 LAACLAQ 428


>gi|330832115|ref|YP_004400940.1| histidyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306338|gb|AEB80754.1| histidyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 427

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 97/473 (20%), Positives = 182/473 (38%), Gaps = 52/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   ++      + +  R+I++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDLLPQDSAKWQYVENFTRSIFKQYNYAEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGERHITLRPEGTAPVVRSYVENKLFAPEVQKPAKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS+    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSNNPATDVETIAMAYHFFEELGIKDIRLHLNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L ++L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKDQL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  ++                               I + +VRGL+YY
Sbjct: 228 YLDEESTAHFEAVKTMLDSLGIA-----------------------YVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E +         +      ++  GGRYDGLV+ F G   PA GF +GI RLI+ L
Sbjct: 265 NHTIFEFMT--------EVGGNDLTICAGGRYDGLVTYFGGPETPAFGFGMGIERLILVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +        +     + +       ++        Q +R  G RAE      +    Q K
Sbjct: 317 EKQGI---ELPLDTQLDVYIAVLGQEANGGALDLVQAIRKQGFRAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            AD       I  G  E   G + +K+     ++   ++  ++   + + ++ 
Sbjct: 373 SADVFGAKAIITLGGSEIESGQVVVKNNQTRSQVETSLEALKTDFASILEELE 425


>gi|223933432|ref|ZP_03625418.1| histidyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897926|gb|EEF64301.1| histidyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 427

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 98/473 (20%), Positives = 182/473 (38%), Gaps = 52/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   ++      + +  R+I++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDLLPQDSAKWQYVENFTRSIFKQYNYAEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGERHITLRPEGTAPVVRSYVENKLFAPEVQKPAKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS+    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSNNPATDVETIAMAYHFFEELGIKDIRLHLNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L ++L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKDQL----SKDSQRRLEENPLRVLDSKEKEDK---------IAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  ++                               I + +VRGL+YY
Sbjct: 228 YLDEESTAHFEAVKTMLDSLGIA-----------------------YVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E +         +      ++  GGRYDGLV+ F G   PA GF +GI RLI+ L
Sbjct: 265 NHTIFEFMT--------EVGGNDLTICAGGRYDGLVTYFGGPETPAFGFGMGIERLILVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +        +     + I       ++        Q +R  G RAE      +    Q K
Sbjct: 317 EKQGI---ELPLDTQLDIYIAVLGQEANGGALDLVQAIRKQGFRAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            AD       I  G  E   G + +K+     ++   ++  ++   + + ++ 
Sbjct: 373 SADVFGAKAIITLGGSEIESGQVVVKNNQTRSQVETSLEALKTDFASILEELE 425


>gi|50904253|gb|AAT87968.1| Histidyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 438

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 96/471 (20%), Positives = 176/471 (37%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 13  MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 72

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 73  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 132

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  G++    D E   M     E +GIK    H+             + 
Sbjct: 133 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRAAYRQA 192

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + ++L    + D   +     +++L  + + D          L  E+   ++ 
Sbjct: 193 LIDYLTPMRDQL----SKDSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILD 239

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                              I + +VRGL+YY
Sbjct: 240 YLDEESQAHFEAVKDMLEAL-----------------------DIPYVIDTNMVRGLDYY 276

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL++ +
Sbjct: 277 NHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMVI 328

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    +        + SK     Q +R  G  AE      +    Q K
Sbjct: 329 EKQGITLPIETEMD---VYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIKAQFK 384

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     L +  G  E   G   IK+    +E+    ++  +       Q
Sbjct: 385 SADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFANISEQ 435


>gi|160903235|ref|YP_001568816.1| histidyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360879|gb|ABX32493.1| histidyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 421

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 99/453 (21%), Positives = 186/453 (41%), Gaps = 60/453 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPNKGVF 71
           +G  D   +E++    I ++ + +++ YG+  I TPL+E ++   + +  + D   K ++
Sbjct: 8   KGTKDIFGEEVKYWEYIENTAKKLFKIYGYKEIRTPLIEKTELFSRGIGQETDIVQKEMY 67

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +  D  G+ ++LR + TA +AR   EN   T   P + + +GP+FR EK   GR+R+F Q
Sbjct: 68  TFDDKKGRSLTLRPEGTASVARAYIENSLITFGSPQKLFYMGPMFRYEKPQAGRYREFYQ 127

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKIGLHG 186
              +  G+    ADAE+   + D    + +     + +      +R+    +L+      
Sbjct: 128 IGAEIFGTDHPLADAELITFVYDFFNKLKLSNFKVKINNIGTFESREKYKEVLKTYYQPL 187

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
              L          D   +F    ++LL  +   + + +              ++ +L  
Sbjct: 188 LPNL--------CEDCQRRFNTNIMRLLDCKIDVEAAKN-----------APSILDYLDE 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +  +    L + +K                         +   ++   IVRGL+YYT   
Sbjct: 229 ESREHFENLQKYLKAY-----------------------NVPFQVDPKIVRGLDYYTKTA 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E         E         V GGGRYD LV +  G   P  GF+IGI R    +++L+
Sbjct: 266 FEV--------EHSDLGEQAVVAGGGRYDDLVEQLGGPKTPGVGFAIGIER---VIEALK 314

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                ++    + +                ++ LR  GI   + + S +N   Q K+A+R
Sbjct: 315 KENVEVESESEIDVYIAFQGEKGEMAAVTLSKELRKKGINTFLNI-SKRNLSGQFKHANR 373

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            N    ++ G  E SR ++ IK++  G++   E
Sbjct: 374 LNAKYVVVIGEEEISRDIVTIKNMKSGEQTQIE 406


>gi|326798720|ref|YP_004316539.1| histidyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326549484|gb|ADZ77869.1| Histidyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 463

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 146/485 (30%), Positives = 232/485 (47%), Gaps = 54/485 (11%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED 64
           +++  L +G  D    E+  RN I ++I++++  YG+  I+TP  E   +L GK+  + D
Sbjct: 3   QIKPSLAKGTRDFSPLEMERRNYIFNTIKDVFRKYGYQEIQTPSFENLQTLTGKYGEEGD 62

Query: 65  -----RPNKGVF-------SLQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFP 105
                  N G F                I+       LRYDLT P ARYV  + + I  P
Sbjct: 63  KLIFKILNSGDFISKISAEKFATLHSNSITPLIAEKALRYDLTVPFARYVVMHQNEITLP 122

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
            + ++I PV+R ++   GR+R+F QCD D VGS +   +AE  ++  + L ++G+K  D+
Sbjct: 123 FKRFQIQPVWRADRPQRGRYREFYQCDADVVGSESLLNEAEFILVYQEALSSLGLK--DF 180

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I +NNRK+L GI + IG          + +  AIDKLDK GL GVK  L          
Sbjct: 181 VIKLNNRKLLAGIADIIGKPE-----LLIDMTVAIDKLDKIGLVGVKQELA--------- 226

Query: 226 FTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                  ++E++ ++   +++       +  L E++K +  G+KG  E+ ++    +K  
Sbjct: 227 ---AKGFSTEELAMLDPIITLSGSNVDKLATLKEVLKSSEMGQKGIEEIEMVLAYAQKLD 283

Query: 284 YNS-NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
            N+   I++  T+ RGL YYTG ++E          K   V  GS+GGGGRYD L   F 
Sbjct: 284 ANALPYIEVDITLARGLNYYTGSIFEV---------KTNEVSMGSIGGGGRYDDLTGMFG 334

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +   G S G  R+   L  L+    +  +   VL+T  D  ++         Q LR 
Sbjct: 335 LPGLTGVGISFGADRIYDVLLELDLFPESTTKTTQVLVTNFDQSTE--DYALSLLQTLRK 392

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            GI +E++  ++K    QL YAD++  P  I  G  E S GML IK +  G++      +
Sbjct: 393 NGIASELYPVAAK-LKKQLTYADQKKIPYVIFIGAEELSSGMLTIKKMITGEQEKMAADD 451

Query: 463 NESWR 467
             S+ 
Sbjct: 452 LFSYL 456


>gi|288925143|ref|ZP_06419079.1| histidine--tRNA ligase [Prevotella buccae D17]
 gi|288338333|gb|EFC76683.1| histidine--tRNA ligase [Prevotella buccae D17]
          Length = 454

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 140/477 (29%), Positives = 217/477 (45%), Gaps = 55/477 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D  + E+  RN I D+I+ +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGSVEMAKRNYIFDTIKEVYALYGFQQIETPAMETLQTLMGKYGEEGDKL 63

Query: 65  ---RPNKGVF--SLQD---DDGQWI---------SLRYDLTAPLARYVAENFDTIVFPCR 107
                N G F   L D    +   +          LRYDLT P ARYV  + D +  P +
Sbjct: 64  LFKVLNSGDFMNKLSDEELQEKNSLHVAAKLCEKGLRYDLTVPFARYVVMHRDELQLPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            ++I PV+R ++   GR+R+F QCD D VGS +   + E+  M+      +GI   +  I
Sbjct: 124 RFQIQPVWRADRPQKGRYREFFQCDADIVGSDSLLNEVELMQMVDTVFTKLGI---NVQI 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL GI E IG     + ++ + +  AIDKLDK GL+ V   L            
Sbjct: 181 KINNRKILTGIAEVIG-----EADKIVDITVAIDKLDKIGLENVNHELK----------- 224

Query: 228 KGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
             A ++ E I+ +   +S+       +  +  ++  +  G KG  E   I   +   G  
Sbjct: 225 -SAGVSGEAIEKLQPIISLSGSNGDKLEVIKTVLGTSEIGLKGVEETRFILNTLELLGLK 283

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           ++ I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F    
Sbjct: 284 ND-IQLDLTLARGLNYYTGAIFEV---------KALDVPMGSITGGGRYDNLTGIFGMPG 333

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G  R+   L +L+           VL           +      + +R AGI
Sbjct: 334 LSGVGISFGADRIYDVLNTLDLYPKEAVNSTQVLFINFGEQET--AYCLPILKQVRDAGI 391

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           RAE++  S+K    Q+ YA+ +  P  ++ G  E     + +K++  G++       
Sbjct: 392 RAEIYPDSAK-MKKQMNYANAKGIPFVVLAGENEMQTRQVTLKNMETGEQRQVSPAE 447


>gi|226311476|ref|YP_002771370.1| histidyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094424|dbj|BAH42866.1| histidyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 424

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 98/474 (20%), Positives = 188/474 (39%), Gaps = 60/474 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           R ++PRG  D     + + + +    R++     +  I TPL E ++   + + +  D  
Sbjct: 3   RIQIPRGTQDIMPGTVELWHYVEAKARDLCRRSNYAEIRTPLFESTELFQRGVGETTDIV 62

Query: 67  NKGVFSLQD-DDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPG 123
            K ++S+ +      ++LR + TA + R   EN        P + Y +GP+FR+E+   G
Sbjct: 63  EKEMYSVANPRSTDALTLRPEGTAGVVRSYVENKLYGVPNQPTKLYYLGPMFRHERPQAG 122

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGIL 179
           R+RQF+Q   + +GSS    DAE+  +     + +G+       +    + +R      L
Sbjct: 123 RYRQFVQFGAEAIGSSDPAIDAEVIGLAIRLYQELGLTGLSVELNSVGTVEDRARHREHL 182

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                    +L          D   +     +++L  + + +     T  A         
Sbjct: 183 LAHLNGVRSEL--------CEDCQSRIDRNPLRVL--DCKNETCKRLTMDA-------PS 225

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +LS +       +   +                               ++  +VRGL
Sbjct: 226 ILDYLSEESAAHFEAVQNYLTAL-----------------------DIPFHVNPRLVRGL 262

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT   +E  +               ++ GGGRY+GLV+   G ++P  GF++ I RL+
Sbjct: 263 DYYTLTAFEIKMAE--------IGAVETLCGGGRYNGLVAELGGDDMPGIGFALSIERLL 314

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +AL+        +   G +    +    ++ +   +    LR AGI AE+     +    
Sbjct: 315 LALEKQGV---QLPISGGIDCFVVVQTPEAKTTAFVLVDQLRQAGIAAELDY-LDRKMKA 370

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           QLK ADR       I G  E + G + +K++A G++   + +   +   A+  Q
Sbjct: 371 QLKQADRLQARFTAIIGESELTNGTVVLKEMATGEQQEVKREELVAVLAAKANQ 424


>gi|253574921|ref|ZP_04852261.1| histidyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251845967|gb|EES73975.1| histidyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 417

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 92/466 (19%), Positives = 170/466 (36%), Gaps = 52/466 (11%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-E 63
             +  + P G  D     +     I +  R++   + +  I TP+ E +    + + +  
Sbjct: 2   NNMAFQKPTGTQDILPGTVEKWQFIEEKARDLCRRFNYREIRTPIFEQTSLFERGVGETT 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGP 122
           D   K +++  D   + ++LR + TA + R   EN         + Y IGP+FR E+   
Sbjct: 62  DIVEKEMYTFLDKGDRSMTLRPEGTAGVVRSYVENKMYGEPDVSKLYYIGPMFRYERPQA 121

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  G+     DAE+  +       +G++     I             + 
Sbjct: 122 GRQRQFHQFGVEAFGAIDPAIDAEVVALGYQFCRELGLQGVKVEINSVGNPSSRAAYREK 181

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            L    +    +      D   +     +++L  +   D             +    ++ 
Sbjct: 182 LL----EFLLPMKDSLCKDCQARIERNPLRVLDCKTDQDKF-----------DGAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L  +      ++ EL+       +    L                       VRGL+YY
Sbjct: 227 SLDEECTTHFAKVQELLSAMEIDYEINPRL-----------------------VRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E         + Q      ++GGGGRY+GLV+   G + P  GF +G+ R+ + L
Sbjct: 264 THTAFE--------YKAQGIGAIDTIGGGGRYNGLVAEVGGPDQPGIGFGMGLERIALIL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E     +K +    +  +     +  +       LR AG  AE      +    Q+K
Sbjct: 316 EKQEIELGAVKPLD---VYLIALGEAAEKEITTQLFKLRQAGFSAERDY-LGRKMKAQMK 371

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            ADR       I G  E  RG + +K +  G++ + ++    +  +
Sbjct: 372 SADRMQARYTAILGDDELQRGEIALKSMDSGEQRTVKLSELLNELQ 417


>gi|110751418|ref|XP_623060.2| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Apis mellifera]
          Length = 603

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 113/487 (23%), Positives = 202/487 (41%), Gaps = 45/487 (9%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
           +KL  + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L +   ++ 
Sbjct: 160 SKLILKTPKGTRDYGPEQMALRLAVLDKIITVFKRHGAETIDTPVFELKEVLTEKYGED- 218

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K ++ L+D  G+ ++LRYDLT P ARY+A    + +             N     GR
Sbjct: 219 --SKLIYDLKDQGGEILALRYDLTVPFARYLAMRKISSIKRYHIA-KVYRRDNPSTTRGR 275

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F QCD D  G          C+ +        +    + I +N+R +LDGI    G+
Sbjct: 276 YREFYQCDFDIAGQYDPMIPDAECIRVISEALQC-LNVGPFTIKLNHRSLLDGIFTTCGV 334

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D    +   V  +IDKLDK     VK  + E              L+    D + +++
Sbjct: 335 PND----KFHAVCSSIDKLDKNSWSEVKREIVEE-----------KGLSESSADKIGTYV 379

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS--NRIKISSTIVRGLEYY 302
           S      +    +     +  E   N L  I  L +        ++I    ++ RGL+YY
Sbjct: 380 SQSGGIELIYELKKDNELMKHESAVNGLESIELLFKYCNIFQVTDKIIFDLSLARGLDYY 439

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG ++EAIL    +               G +D      K +++P  G S+G+ R+   L
Sbjct: 440 TGIIFEAILTGDEVGVGSVAGGGRYDNLVGMFD-----SKKKSIPCVGLSLGVERIFNVL 494

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +   +  +       V +       +   +      +L  AG++AE     +     QL 
Sbjct: 495 EMKLNHESVKTRTNEVEVFVATAQKNLYEERMKILTLLWDAGVKAEHSYKKNIKLLAQLH 554

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           + +    PL II G GE ++G + ++D+    E+S                  IP + L+
Sbjct: 555 HCEESGIPLVIIIGEGELAKGEVTLRDVVSRVEVS------------------IPRAHLI 596

Query: 483 STVKKIL 489
             ++K L
Sbjct: 597 DEIRKRL 603


>gi|195071967|ref|XP_001997112.1| GH23584 [Drosophila grimshawi]
 gi|193905663|gb|EDW04530.1| GH23584 [Drosophila grimshawi]
          Length = 520

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 126/507 (24%), Positives = 221/507 (43%), Gaps = 59/507 (11%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++
Sbjct: 54  NQKFTLKTPKGTRDYAPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED 113

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     G
Sbjct: 114 ---SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTRG 169

Query: 124 RFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           R+R+F QCD D         ADAE   ++A+ L  +     DY I +N+R++LDG+ E  
Sbjct: 170 RYREFYQCDFDIAGTYDPMLADAECVKIVAEILNTLD--IGDYVIKLNHRQLLDGMFEAC 227

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+      N    +  A+DKLDK   + V+  + E              L     D +  
Sbjct: 228 GVP----ANCFRAICSAVDKLDKSPWEDVRKEMVEE-----------KGLDGATADKIGE 272

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +     + E       +K      KG   + ++ +     G    RI    ++ RGL
Sbjct: 273 YVRLSGGADLVEQLLADPKLKAVPNAVKGLEGMQLLLKYCALFG-LEQRISFDLSLARGL 331

Query: 300 EYYTGCVYEAILGFPVMNEK-------------QKPVVFGSVGGGGRYDGL--VSRFKGQ 344
           +YYTG +YE +L                     ++    GSV GGGRYD L  +   +G+
Sbjct: 332 DYYTGVIYEGVLKVDPSPAGSPAKSSQNGEQAMEQGGTVGSVAGGGRYDNLVGMFDPRGK 391

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            VP  G SIG+ R+   L++  +++        V +           +       L  AG
Sbjct: 392 AVPCVGVSIGVERIFSVLEAKFAASKVKLRTSDVEVYVASAHKGLHEQRLRVLNQLWDAG 451

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I+AE     +     QL++ +    PLAI+ G  E ++G+++++++   +E S       
Sbjct: 452 IKAEHSYKLNPKLLAQLQHCEEHQIPLAIVLGDSELAQGIVKLREVTTRQESS------- 504

Query: 465 SWREARVAQITIPISELVSTVKKILQE 491
                      +P+ EL   +++ LQ+
Sbjct: 505 -----------VPLVELPDEIRRRLQK 520


>gi|301164185|emb|CBW23743.1| putative histidyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 454

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 148/481 (30%), Positives = 215/481 (44%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNKELAEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +     LS    + +  L  ++  +  G KG  E   I   ++  
Sbjct: 227 ------GISEEAIAKLQPIILLSGTNAEKLATLKTVLSDSETGLKGVEESEFILNTLQTM 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 G-LKNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE           +L         + S         R 
Sbjct: 331 MAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTQLLFINFGEKEAAFS--MGILSKARA 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  ++K    Q+ YA+ +N P   I G  E + G   +K++  G++     + 
Sbjct: 389 AGIRAEIFPDAAK-MKKQMSYANVKNIPFVAIVGENEMNEGKAMLKNMENGEQQLVTAEE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|146317934|ref|YP_001197646.1| histidyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146320120|ref|YP_001199831.1| histidyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751159|ref|YP_003024300.1| histidyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753060|ref|YP_003026200.1| histidyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253754883|ref|YP_003028023.1| histidyl-tRNA synthetase [Streptococcus suis BM407]
 gi|166228620|sp|A4VZ92|SYH_STRS2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166228622|sp|A4VT07|SYH_STRSY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|145688740|gb|ABP89246.1| Histidyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145690926|gb|ABP91431.1| Histidyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815448|emb|CAZ51026.1| histidyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817347|emb|CAZ55082.1| histidyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819305|emb|CAR44645.1| histidyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292557718|gb|ADE30719.1| Histidyl-tRNA synthetase, class IIa [Streptococcus suis GZ1]
          Length = 427

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 98/473 (20%), Positives = 182/473 (38%), Gaps = 52/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   ++      + +  R+I++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDLLPQDSAKWQYVENFTRSIFKQYNYAEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGERHITLRPEGTAPVVRSYVENKLFAPEVQKPAKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS+    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSNNPATDVETIAMAYHFFEELGIKDIRLHLNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E+L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKEQL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  ++                               I + +VRGL+YY
Sbjct: 228 YLDEESTVHFEAVRSMLDNL-----------------------GITYTIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E +         +      ++  GGRYDGLV+ F G   PA GF +GI RLI+ L
Sbjct: 265 NHTIFEFMT--------EVGGNDLTICAGGRYDGLVTYFGGPETPAFGFGMGIERLILVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +        +     + +       ++        Q +R  G RAE      +    Q K
Sbjct: 317 EKQGI---ELPLDTQLDVYIAVLGQEANGGALDLVQAIRKQGFRAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            AD       I  G  E   G + +K+     ++   ++  ++   + + ++ 
Sbjct: 373 SADVFGAKAIITLGGSEIESGQVVVKNNQTRSQVETSLEALKTDFASILEELE 425


>gi|167749878|ref|ZP_02422005.1| hypothetical protein EUBSIR_00846 [Eubacterium siraeum DSM 15702]
 gi|167657190|gb|EDS01320.1| hypothetical protein EUBSIR_00846 [Eubacterium siraeum DSM 15702]
          Length = 436

 Score =  252 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 107/467 (22%), Positives = 191/467 (40%), Gaps = 58/467 (12%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF-L 60
            KK +L  + PRG  D   KEI   + +    RN+ E YG   I TP  E+++   +   
Sbjct: 8   NKKMELVTKKPRGTEDKLPKEIYKWHTVEKIARNVAEAYGCKEIRTPTFEHTELFQRGVG 67

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEK 119
              D   K +++  D  G+ I+L+ + TA   R V EN       P +TY     FR E 
Sbjct: 68  GTTDVVQKEMYTFNDKKGRSITLKPEGTAGAVRAVIENGLLNDALPLKTYYFTRCFRYEA 127

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKIL 175
              GR R+F Q  ++  G+++  ADAE+  +  D ++++G+K      +       R   
Sbjct: 128 PQSGRLREFNQVGIEYFGTASPAADAEVIALANDIIKSLGVKNISIEINSIGCPKCRAEY 187

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
              L++      D+L            L++     ++LL  +    +S           +
Sbjct: 188 HKALKEYYSQYKDQL--------CGTCLERLDRNPMRLLDCKSEICSSF---------KK 230

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
              +++ +L  D  +    + + +                               ++  I
Sbjct: 231 DAPMILDYLCDDCREHFENVKKRLD-----------------------VLGVSYTVNPLI 267

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YYT  V+E I               G+V  GGRY+GLV    G +VP  GF++G+
Sbjct: 268 VRGLDYYTNTVFEFISNE--------IGSQGAVCAGGRYNGLVEEIGGNSVPGLGFAMGL 319

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R+I+ +++ +      K+     +     D ++        Q LR  G  AE  + S +
Sbjct: 320 ERIIMVMENQKLEFEPEKKCD---LYIASFDDETSIYAMELVQKLREEGFWAECDI-SGR 375

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           +F  Q+KYA++      ++ G  E +    ++K ++ G E    + +
Sbjct: 376 SFKAQMKYANKIGATYCMVIGGDEMNTKSAKLKRMSDGTETPVTLDD 422


>gi|186476177|ref|YP_001857647.1| histidyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|229558662|sp|B2JIV0|SYH_BURP8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|184192636|gb|ACC70601.1| histidyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 446

 Score =  252 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 98/498 (19%), Positives = 193/498 (38%), Gaps = 64/498 (12%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK   +    +G  D   ++  +      +++++  +YG+  I TP++E++    + + +
Sbjct: 5   KKRLEKLSGVKGMNDILPQDAGLWEFFETTVKSMLRSYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +    DAE+ +M     + +G+      I             
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDTDAEIILMCQRLWDDLGLTGIKLEINSLGLAEERAKHR 184

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +   +K  + L      D   +     +++L  +                ++    +
Sbjct: 185 VELIAYLEKHMDVLD----EDAKRRLYTNPLRVLDTKN---------PALQAVAQNAPKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +       L  ++K                         +    I+  +VRGL+
Sbjct: 232 IDFLGDESRAHFEGLQRILKAN-----------------------NIPFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNF 417
            LK          E     +        +  +  +  + LR  G+   +     G + +F
Sbjct: 321 LLKEENLVP----ENEGCDVYVAHQGEAARDQAFIVAERLRDTGLDVILHCSPDGQASSF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q+K AD      A+I G  E + G   +K L    +              +  Q T+P
Sbjct: 377 KSQMKRADASGAAFAVILGEDEIANGTAGVKALRDSSQ-----------SNGKSEQQTVP 425

Query: 478 ISELVSTVKKILQENKEE 495
           + +L   +   +  + E+
Sbjct: 426 LEDLTEYLINAMVASTED 443


>gi|330817166|ref|YP_004360871.1| Histidyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327369559|gb|AEA60915.1| Histidyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 444

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 103/499 (20%), Positives = 195/499 (39%), Gaps = 66/499 (13%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + 
Sbjct: 4   TKRKLEKLTGVKGMNDILPQDAGLWEFFESTVKSLLRAYGYQNIRTPIVEHTQLFTRGIG 63

Query: 62  D-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +  D   K ++S  D  +G+ ++LR + TA + R   E+      P R + +GP+FR+E+
Sbjct: 64  EVTDIVEKEMYSFTDALNGENLTLRPENTAAVVRAAIEHNLLYDGPKRLWYVGPMFRHER 123

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I            
Sbjct: 124 PQRGRYRQFHQVGVEAIGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAH 183

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +   ++  E L      D   +     +++L  +                ++    
Sbjct: 184 RVELIKYLEQHVEVLD----EDAKRRLYTNPLRVLDTKN---------PALQEIAQNAPK 230

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ FL          L  L+K                         +    I+  +VRGL
Sbjct: 231 LIDFLGESSRAHFDGLQRLLKAN-----------------------NVPFTINPRLVRGL 267

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++G+ R++
Sbjct: 268 DYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERIL 319

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKN 416
             LK  +       E   V +  +     +  +  +  + LR  G+         G+S +
Sbjct: 320 ELLKEEQLVP----EQDGVDVYLVHQGEAAREQAFIIGERLRDTGLDVIFHCSADGASAS 375

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           F +Q+K AD      A+I G  E + G   +K L  G E  +             AQ T+
Sbjct: 376 FKSQMKRADASGAAYAVILGEDEVANGTAGVKALR-GAEGEKS------------AQQTV 422

Query: 477 PISELVSTVKKILQENKEE 495
            +  L   +   +  + E+
Sbjct: 423 TVENLTEFLINAMVASAED 441


>gi|57641497|ref|YP_183975.1| histidyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|68744300|sp|Q5JIM2|SYH_PYRKO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|57159821|dbj|BAD85751.1| histidyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 436

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 122/468 (26%), Positives = 207/468 (44%), Gaps = 39/468 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +  K++     G  D   +E+  R  + + IR ++E + F  + TP  EY++      
Sbjct: 1   MARLDKVK-----GTRDLLPEEMAKRRWVFERIREVFEGFNFQEVLTPTFEYTELFKLRS 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E    K +++ QD  G+ ISLR D+T+ +AR     F     P + Y I  +FR E+ 
Sbjct: 56  GEE--VVKQLYAFQDKGGRDISLRPDMTSSVARLYVNRFQNAPKPIKWYYIANMFRYEEP 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F Q  V+ +GS    ADAE+  +   +  AVG+   D+ + I +R +LD   +
Sbjct: 114 QSGRYREFWQAGVELIGSDRVEADAEVIALFTQSYLAVGL--EDFTVNIGDRILLDEFAK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +G+  D      + ++R IDK DK   +     L E              L  + ++ +
Sbjct: 172 MLGVEDD------IGLMRLIDKKDKMSREEFVGALREF------------GLNDDGVEKV 213

Query: 241 VSFLSIDL-EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +S + I      +    E +  +   +     L  + +L+   G +   ++I   I RG 
Sbjct: 214 LSLIEIKGLPDEVLPKAEELFTSEEAKAEIKRLYELVDLLDAYGVSK-WVRIDLGIARGF 272

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT  V+EAI    +                 RYD L+  F G+  PATGF+IGI RLI
Sbjct: 273 DYYTSVVFEAIAPNDLGIGSIGGGG--------RYDNLIEVFGGKPTPATGFAIGIERLI 324

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L+        IK    V +  +  D +        TQ LR A +RA++ L + +    
Sbjct: 325 PILEWKGLLP-EIKLRPDVYVIPIGDDREVKKTAIEITQGLREATVRADIEL-TGRKLRK 382

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            L YA +   P  ++ G  +   G + ++D+  G++ S E +      
Sbjct: 383 ALDYAGKLGVPYVVLVGKKDLEAGKVTLRDMKSGEQKSIEKERAVEEI 430


>gi|251783488|ref|YP_002997793.1| histidyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242392120|dbj|BAH82579.1| histidyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 426

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 100/475 (21%), Positives = 177/475 (37%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MAFQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR R+F Q  V+  G++    D E   M     E +GIK    H+       +R      
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRSAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L++        D   +     +++L  + + D          L  E+  
Sbjct: 181 LIDYLTPMRDQLSK--------DSQRRLDENPLRVLDSKEKEDK---------LAVEKAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +     +  +++                         +    I + +VRG
Sbjct: 224 SILDYLDEESQAHFEAVKAMLEAL-----------------------NIPYVIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL
Sbjct: 261 LDYYNHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++    +     EM    +        + SK     Q +R  G  AE      +   
Sbjct: 313 LMIIEKQGLALPIETEMD---VYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD     L +  G  E   G   IK+    +E+    ++  +  E    Q
Sbjct: 369 AQFKSADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFENISEQ 423


>gi|147921754|ref|YP_684424.1| histidyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110619820|emb|CAJ35098.1| histidyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 433

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 118/462 (25%), Positives = 209/462 (45%), Gaps = 37/462 (8%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +++ +  +GF D   +E+  R  +LD I N+   YGF  +++P +E  D       +E  
Sbjct: 3   QMKFQSLKGFRDFYPEEMAARREVLDKIFNVVRRYGFREVDSPSVESMDLFRIKSGEEIV 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             +  FS +D   + I+L  +LT  +AR V +   T+  P + + +  ++R E+   GR 
Sbjct: 63  --QQTFSFKDKGEREITLIPELTPTIARMVVDREKTLRRPIKWFSMPKMWRYEEPQSGRL 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F Q +VD  G     ADAE+  +  D +  +G+   ++   I++R+ + G LE +G+ 
Sbjct: 121 REFYQLNVDIYGVKGPEADAEVLAVGIDLMLKLGL-EGEFVFKISDRRFMQGALEGLGVT 179

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                     V  AIDK  K   +  K LL              A L   Q+  +++ L 
Sbjct: 180 E------VGPVFAAIDKRGKISPEEFKQLLA------------TAGLNDFQMGKLIAILD 221

Query: 246 IDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                 +++ ++  L+       +G   L  ++EL+          +    I+RGL YYT
Sbjct: 222 TKGPITEALPKVKALLARNDTVVEGMTNLEKLAELMTMYNMAQ-YCEFDPAIIRGLAYYT 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+E                  +V GGGRYD +V  F G+++PA GF +G + L + ++
Sbjct: 281 GTVFECF---------DVKGELRAVFGGGRYDKIVGLFGGEDMPAVGFGMGDAVLEILMR 331

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                          ++TT     ++ +      Q LR      E+ L   +NFGNQ+KY
Sbjct: 332 RAGVWPQESITTDYYILTTKPQFKETETF---LAQALRENNFVVEVDL-QGRNFGNQMKY 387

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A+       +I G  E + G + +K++  G+++ +EI+   S
Sbjct: 388 ANAIGARHVLILGDKEMAEGKVTVKNMETGEQVMKEIREFLS 429


>gi|332882047|ref|ZP_08449682.1| histidine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332679971|gb|EGJ52933.1| histidine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 454

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 138/473 (29%), Positives = 212/473 (44%), Gaps = 61/473 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I D+IR +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFDTIRGVYALYGFQQIETPAMENLSTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDDG-------QWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F + +          + +                LRYDLT P ARYV ++ D +  
Sbjct: 62  -KLLFKILNSGNFLSGIAPEELGEANTNKLAARLCEKGLRYDLTVPFARYVVQHRDELTM 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTQFGI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E IG          + +  AIDKLDK GL  V   L  G      
Sbjct: 178 VCIKLNNRKILTGIAEMIGAADK-----IVDITVAIDKLDKIGLDNVNAELKAG------ 226

Query: 225 DFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  L+ E +  +   +S+    ++ +  + +++  +  G KG  E   + + +   
Sbjct: 227 ------GLSDEAVARLQPIISLSGTNKEKLAVMKDVLAESETGLKGIAECEFVLDTLSAL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   N +++  T+ RGL YYTGC++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 GLR-NAMELDLTLARGLNYYTGCIFEV---------KALDVEIGSITGGGRYDNLTGIFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  L+           +L           +         R 
Sbjct: 331 MPGVSGVGISFGADRIFDVLNQLDLYPKETVTGTELLFVNFGAAEA--AYCLPVMAQARQ 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
           AG+R E++  S+K    Q+ YA+ +  P   I G  E + G + +K++A G++
Sbjct: 389 AGVRCEIYPDSAK-MKKQMSYANAKAVPFVAIVGENEMNEGKVTLKNMATGEQ 440


>gi|291570922|dbj|BAI93194.1| histidyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 425

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 180/468 (38%), Gaps = 54/468 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D   +E+     +            +  I TP+ E +    + + +  D   
Sbjct: 4   IQSLRGTRDILPEEVGYWQWVASVAEETLARGNYQEIRTPIFEPTALFERGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + I+LR + TA + R   E          R + +GP+FR E+   GR R
Sbjct: 64  KEMYTFCDRGDRSITLRPEGTAGVVRAYIERKLHANPGVQRLWYMGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLH 185
           QF Q  V+ +GS    AD E+  +  D L+++GI     ++    +R       + +  +
Sbjct: 124 QFHQLGVEVLGSDDPRADVEVIAVAVDILKSLGITNLHLNLNSVGDRTDRQNYRQALVDY 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 E        D  D+     +++L  +   + + + T+ A         ++ +L 
Sbjct: 184 LTPFSGELD-----QDSRDRLTRNPMRILDSKD--ERTQEITRNA-------PSILDYLG 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              +     +  L+K                              ++  +VRGL+YYT  
Sbjct: 230 ERSQSHFERVQYLIKEL-----------------------GISYTLNPRLVRGLDYYTHT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E I                +V GGGRYDGLV    G +VPA G++IG+ RLI+ L+ L
Sbjct: 267 AFEII--------SDDLGAQATVCGGGRYDGLVQELGGPSVPAVGWAIGLERLIILLQQL 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                   +     +  +     + +   +  Q LR AG+R E+ L S   F  Q K AD
Sbjct: 319 HQPPQVTPQ-----LYLVSRGEKAEANGLILAQKLRQAGLRVELDL-SGSAFSKQFKRAD 372

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           R      ++ G  E   G + +K L  G++      +     E    Q
Sbjct: 373 RSGAGACLVLGDAEAIAGTVNLKWLKSGEQTVLNQVDLIGNVEDIKQQ 420


>gi|291557530|emb|CBL34647.1| histidyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 441

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 108/467 (23%), Positives = 192/467 (41%), Gaps = 58/467 (12%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF-L 60
            KK +L  + PRG  D   KEI   + +    RN+ E YG   I TP  E+++   +   
Sbjct: 13  NKKMELVTKKPRGTEDKLPKEIYKWHTVEKIARNVAEAYGCKEIRTPTFEHTELFQRGVG 72

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEK 119
              D   K +++  D  G+ I+L+ + TA   R V EN     V P +TY     FR E 
Sbjct: 73  GTTDVVQKEMYTFNDKKGRSITLKPEGTAGAVRAVIENGLLNDVLPLKTYYFTRCFRYEA 132

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKIL 175
              GR R+F Q  ++  G+++  ADAE+  +  D ++++G+K      +       R   
Sbjct: 133 PQSGRLREFNQVGIEYFGTASPAADAEVIALANDIIKSLGVKNISLEINSIGCPKCRAEY 192

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
              L++      D+L            L++     ++LL  +    +S           +
Sbjct: 193 HKALKEYYSQYKDQL--------CGTCLERLDRNPMRLLDCKSEICSSF---------KK 235

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
              +++ +L  D  +    + + +                               ++  I
Sbjct: 236 DAPMILDYLCDDCREHFENVKKRLD-----------------------VLGVSYTVNPLI 272

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YYT  V+E I               G+V  GGRY+GLV    G +VP  GF++G+
Sbjct: 273 VRGLDYYTNTVFEFISNE--------IGSQGAVCAGGRYNGLVEEIGGNSVPGLGFAMGL 324

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R+I+ +++ +      K+     +     D ++        Q LR  G  AE  + S +
Sbjct: 325 ERIIMVMENQKLEFEPEKKCD---LYIASFDDETSIYAMELVQKLREEGFWAECDI-SGR 380

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           +F  Q+KYA++      ++ G  E +    ++K ++ G E    + +
Sbjct: 381 SFKAQMKYANKIGATYCMVIGGDEMNTKSAKLKRMSDGTETPVTLDD 427


>gi|239616783|ref|YP_002940105.1| histidyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505614|gb|ACR79101.1| histidyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 419

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 108/468 (23%), Positives = 198/468 (42%), Gaps = 54/468 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
               +G  D   +EI+  + I ++IR I + Y F+ I TP+ E+++   + + +  D   
Sbjct: 2   ITRIKGTQDVFFEEIKYWHYIENTIRKITKLYAFEEIRTPIFEHTELFKRSVGESTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D  G+ ++LR + TA +AR   EN       P + + +GP+FR EK   GR R
Sbjct: 62  KEMYTFNDKGGRSLTLRPEGTASVARAYVENGFINRGSPLKLFYVGPMFRYEKPQAGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIGLH 185
           QF Q  ++ +GS   TAD E+  +  + L+ +GI     Y   +   K      E +  +
Sbjct: 122 QFHQFGIEILGSHDSTADYEVIELGINFLKELGISGTKLYINSVGCNKCRPKYNEVLKDY 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             DKL          D   ++    ++LL  +   +            +E    + ++L 
Sbjct: 182 YSDKL-----STLCDDCKRRYNTNVLRLLDCKIDKE-----------VAEGAPSIHNYLC 225

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D +    +L   +K      +  ++L                       VRGL+YYT  
Sbjct: 226 DDCKIHFEQLQYYLKSRNLDYEVDHKL-----------------------VRGLDYYTKT 262

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E                   V  GGRYDGLV    G++VPA GF+ G+ R+I+ LK +
Sbjct: 263 AFEI--------RSNMLGAQDQVLAGGRYDGLVEYIGGKSVPAVGFAAGMERMILLLKKM 314

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                  +      +  +  + ++  K   + + LR  GI   + +   +N  N+ K+A 
Sbjct: 315 GIEPKVEELNT---VAILPMNKEAFVKAFEFAERLRKKGISTFVDVME-RNLRNKFKHAS 370

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           R    +A++ G  E  +G + IK + +G + + +      +   ++ +
Sbjct: 371 RIGAKIAVVIGEEELEKGFVTIKVMEEGSQYTVDSDWMADYIFKKLKE 418


>gi|315608186|ref|ZP_07883178.1| histidine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250155|gb|EFU30152.1| histidine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 454

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 140/477 (29%), Positives = 217/477 (45%), Gaps = 55/477 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D  + E+  RN I D+I+ +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGSVEMAKRNYIFDTIKEVYALYGFQQIETPAMETLQTLMGKYGEEGDKL 63

Query: 65  ---RPNKGVF--SLQD---DDGQWI---------SLRYDLTAPLARYVAENFDTIVFPCR 107
                N G F   L D    +   +          LRYDLT P ARYV  + D +  P +
Sbjct: 64  LFKVLNSGDFMNKLSDEELQEKNSLHVAAKLCEKGLRYDLTVPFARYVVMHRDELQLPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            ++I PV+R ++   GR+R+F QCD D VGS +   + E+  M+      +GI   +  I
Sbjct: 124 RFQIQPVWRADRPQKGRYREFFQCDADIVGSDSLLNEVELMQMVDTVFTKLGI---NVQI 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL GI E IG     + ++ + +  AIDKLDK GL+ V   L            
Sbjct: 181 KINNRKILTGIAEVIG-----EADKIIDITVAIDKLDKIGLENVNHELK----------- 224

Query: 228 KGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
             A ++ E I+ +   +S+       +  +  +++ +  G KG  E   I   +   G  
Sbjct: 225 -SAGVSGEAIEKLQPIISLSGSNGDKLKVIQAVLETSETGLKGVEETRFILNTLELLGLK 283

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           ++ I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F    
Sbjct: 284 ND-IQLDLTLARGLNYYTGAIFEV---------KALDVPMGSITGGGRYDNLTGIFGMPG 333

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G  R+   L +L            VL           +      + +R AGI
Sbjct: 334 LSGVGISFGADRIYDVLNTLNLYPKEAVNSTQVLFINFGEQET--AYCLPILKQVRDAGI 391

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           RAE++  S+K    Q+ YA+ +  P  ++ G  E     + +K++  G++       
Sbjct: 392 RAEIYPDSAK-MKKQMNYANAKGIPFVVLAGENEMQTRQVTLKNMETGEQRQVSPAE 447


>gi|94548835|gb|ABF38881.1| Histidyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 438

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 98/471 (20%), Positives = 177/471 (37%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 13  MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 72

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 73  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 132

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  G++    D E   M     E +GIK    H+             + 
Sbjct: 133 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRAAYRQA 192

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + ++L    + D   +     +++L  + + D          L  E+   ++ 
Sbjct: 193 LIDYLTPMRDQL----SKDSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILD 239

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                              I + +VRGL+YY
Sbjct: 240 YLDEESQAHFEAVQDMLEAL-----------------------DIPYVIDTNMVRGLDYY 276

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL++ +
Sbjct: 277 NHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMII 328

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    I        + SK     Q +R  G  AE      +    Q K
Sbjct: 329 EKQGITLPIETEMD---IYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIKAQFK 384

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     L +  G  E   G   IK+    +E+    ++  +  E    Q
Sbjct: 385 SADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMTNFENISEQ 435


>gi|110639058|ref|YP_679267.1| histidyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123354414|sp|Q11RN9|SYH_CYTH3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|110281739|gb|ABG59925.1| histidyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 453

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 145/480 (30%), Positives = 220/480 (45%), Gaps = 58/480 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  LP+G  D    ++  R  +L +IR I+  YGF PIETP +E    L GK+  + D  
Sbjct: 3   KPSLPKGTRDFGPAQMLKRQYLLQTIREIFTKYGFLPIETPAMENLSVLTGKYGDEGD-- 60

Query: 67  NKGVFSLQDDDG-------QWI--------------SLRYDLTAPLARYVAENFDTIVFP 105
            + ++ + +            +              +LRYDLT P AR+V  N + I FP
Sbjct: 61  -QLIYKILNSGDFIQGVEQNHLQEGYKKLIPKISKKALRYDLTVPFARHVVMNRNDITFP 119

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
            + Y+I PV+R ++   GR+ +F+QCD D VG+ +   +AE+ +M+ +   A+GI   D+
Sbjct: 120 FKRYQIQPVWRADRPQKGRYCEFMQCDADVVGTDSLLCEAEIVLMIHEAFAALGIT--DF 177

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            + INNRKIL GI + IG  G +       +  AIDKLDK G + V   L          
Sbjct: 178 VVKINNRKILSGIADAIGKEGSE-----AELCVAIDKLDKIGKEAVLEELK--------- 223

Query: 226 FTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                  T  Q+  ++    L  +  +    L  ++  +  G KG +EL  +  L+ KSG
Sbjct: 224 ---TKGFTDSQLTRLLPVFDLKGNNAEIFPLLRTILAQSSVGLKGIDELEKVFTLIEKSG 280

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
             +  I+   T+ RGL YYTG ++E          K   V  GSV GGGRYD L   F  
Sbjct: 281 LGNASIETDLTLARGLSYYTGAIFEV---------KILNVQMGSVCGGGRYDNLTGVFGL 331

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            NV   G S GI R+   +  L    +       +LI     D ++          LR  
Sbjct: 332 PNVSGVGISFGIDRIYDVMNELNLFPSQESNSTRLLICAF--DENTFMHALPMVTKLRAQ 389

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           GI  E++    K    QL YAD +  P A++ G  E ++G+  +K+L  G++        
Sbjct: 390 GINTELYPDPVK-IKKQLSYADDKKIPFALLIGEDEMNQGLYSLKNLISGEQFKVTFDEV 448


>gi|319757428|gb|ADV69370.1| histidyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 427

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 100/473 (21%), Positives = 186/473 (39%), Gaps = 52/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   ++      + +  R+I++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDLLPQDSAKWQYVENFTRSIFKQYNYAEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGERHITLRPEGTAPVVRSYVENKLFAPEVQKPAKFYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS+    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLRQFHQIGVECFGSNNPATDVETIAMAYHFFEELGIKDIRLHLNSLGNPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E+L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPLKEQL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +       +  ++                               I + +VRGL+YY
Sbjct: 228 YLDEESTAHFEAVKTMLDSLGIA-----------------------YVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E +         +      ++  GGRYDGLV+ F G   PA GF +GI RLI+ L
Sbjct: 265 NHTIFEFMT--------EVGGNDLTICAGGRYDGLVTYFGGPETPAFGFGMGIERLILVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +          ++  V I  +  +++         Q++R  G RAE      +    Q K
Sbjct: 317 EKQGIDLPLDTQLD-VYIAVLGQEAN--GGALELVQVIRKQGFRAERDY-LDRKLKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            AD       I  G  E   G + +K+     ++   ++  ++   + + ++ 
Sbjct: 373 SADVFGAKAIITLGGSEIESGQVVVKNNQTRSQVETSLEALKTDFASILEELE 425


>gi|156932943|ref|YP_001436859.1| histidyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156531197|gb|ABU76023.1| hypothetical protein ESA_00746 [Cronobacter sakazakii ATCC BAA-894]
          Length = 414

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 100/487 (20%), Positives = 179/487 (36%), Gaps = 86/487 (17%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    +  I  RI  +++ +  +YG+  I  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDYLPGDTAIWQRIEGTLKQVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  ++LR + TA   R   E+        R + IGP+FR+E+   GR+RQF Q   
Sbjct: 61  EDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGA 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILEKIGL 184
           +  G      DAE+ M+ A    A+G                   N R  L   LE+   
Sbjct: 121 EVFGLQGPDIDAELIMLTARWWRALGIAEHVSLELNSIGSLDARANYRDALIAFLEQHVD 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D+            D   +     +++L  +                     ++  +L
Sbjct: 181 KLDE------------DCKRRMYSNPLRVLDSKN---------PDVQALLNDAPMLGDYL 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +  +    L   +            L                       VRGL+YY  
Sbjct: 220 DEESREHFAGLCAFLDDAGIAYTVNQRL-----------------------VRGLDYYNR 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ RL++ +++
Sbjct: 257 TVFEWVTTS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQA 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLK 422
           +            V I  +   + + S      + +R A  G +     G   NF  Q  
Sbjct: 309 VN---PEFTADPVVDIYLIASGNGAQSAAMQLAERVRDALPGCKLMTNYGGG-NFKKQFA 364

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            AD+    +A++ G  E +   + +KDL  G++ +                     SEL 
Sbjct: 365 RADKWGARIALVLGEDEVANRQVVVKDLRSGEQQAL------------------AQSELA 406

Query: 483 STVKKIL 489
           + ++ +L
Sbjct: 407 AHLQTLL 413


>gi|194766816|ref|XP_001965520.1| GF22534 [Drosophila ananassae]
 gi|190619511|gb|EDV35035.1| GF22534 [Drosophila ananassae]
          Length = 569

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 119/487 (24%), Positives = 216/487 (44%), Gaps = 42/487 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++
Sbjct: 100 NQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED 159

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     G
Sbjct: 160 ---SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTKG 215

Query: 124 RFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           R+R+F QCD D         ADAE   ++A+ L+ +     DY I +N+R++LDG+ E  
Sbjct: 216 RYREFYQCDFDIAGTYDPMLADAECVKIVAEILDTLD--IGDYVIKLNHRQLLDGMFEAC 273

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+  D        +  A+DKLDK   + V+  + E              L     D +  
Sbjct: 274 GVPAD----NFRAICSAVDKLDKSPWEDVRKEMVEE-----------KGLDEAAADRIGE 318

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +     + E       +K      KG   + ++ +     G    R+    ++ RGL
Sbjct: 319 YVRLSGGTELVEQLLADAKLKAVPNAVKGLEGMQLLLKYCSIFG-LEKRVSFDLSLARGL 377

Query: 300 EYYTGCVYEAILGFP--------------VMNEKQKPVVFGSVGGGGRYDGL--VSRFKG 343
           +YYTG +YE +L                   ++  +P   GSV GGGRYD L  +   +G
Sbjct: 378 DYYTGVIYEGVLKGESASVATTPVKTSRQNGDQSNEPATVGSVAGGGRYDNLVGMFDPRG 437

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
           + VP  G SIG+ R+   L++  ++         V             +       L  A
Sbjct: 438 KAVPCVGVSIGVERIFSVLEARAAAGGQKLRTSDVEAYVASAHKGLHEQRLKVLNQLWDA 497

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           GI+AE     +     QL++ +    PL ++ G  E ++G+++++++   +E + ++++ 
Sbjct: 498 GIKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKLREVTTRQETNVKLEDL 557

Query: 464 ESWREAR 470
            +    R
Sbjct: 558 SAEIRRR 564


>gi|297806295|ref|XP_002871031.1| histidyl-tRNA synthetase 1 [Arabidopsis lyrata subsp. lyrata]
 gi|297316868|gb|EFH47290.1| histidyl-tRNA synthetase 1 [Arabidopsis lyrata subsp. lyrata]
          Length = 486

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 116/460 (25%), Positives = 214/460 (46%), Gaps = 38/460 (8%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+    P+G  D P +++R+RN + +  + +   +G++ ++ P+LE      +   +E 
Sbjct: 65  QKIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLFGYEEVDFPVLETEALFIRKAGEEI 124

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           R    ++  +D   + ++LR +LT  LAR V +   ++  P + + +G  +R E+   GR
Sbjct: 125 RD--QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGR 182

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q ++D +G    TA+AE+   +    + +GI  +D    +++RK+L  +L+K G+
Sbjct: 183 RREHYQWNMDIIGVPEVTAEAELISSIVTFFKRIGITASDVGFKVSSRKVLQELLKKYGV 242

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D        V   IDK++K  +  +K  LG               ++ + I+ ++  L
Sbjct: 243 PED----LFGRVCIIIDKIEKIPIDEIKKELGFT------------GVSEDAIEQLLQVL 286

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S+   KS+ +L +++ G     +   +L  +  L  K GY S  I+  +++VRGL YYTG
Sbjct: 287 SV---KSLDDLEDILGGAG---EAIADLKQLFSLAEKFGY-SEWIQFDASVVRGLAYYTG 339

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E            +     ++ GGGRYD L+S + G ++PA GF  G + ++  LK 
Sbjct: 340 IVFEGF---------DRKGKLRAICGGGRYDRLLSTYGGDDIPACGFGFGDAVIVELLKE 390

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +      +E   V       D D           LR  G   ++ L  SK      K A
Sbjct: 391 KDLLPELGQE---VENIVCALDKDLQGAAATVATTLRDKGQTVDLVL-ESKPLKWVFKRA 446

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            R N    ++ G  E   G + +K L+ G++   ++ + E
Sbjct: 447 ARVNARRLVLVGKTEWEDGSVSVKVLSSGEQFQVKLNDLE 486


>gi|256819129|ref|YP_003140408.1| histidyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256580712|gb|ACU91847.1| histidyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 458

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 141/480 (29%), Positives = 230/480 (47%), Gaps = 52/480 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D    ++  RN I+++I+N +  +GF PIETP  E  D+L GK+  + D  
Sbjct: 5   KPSIPKGTRDFSPADVAKRNFIINTIKNTFNAFGFQPIETPSFENYDTLMGKYGEEGDRL 64

Query: 65  ---RPNKGVFS-------LQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCR 107
                N G F+        +  + Q ++       LRYDLT P ARYV ++ + ++FP +
Sbjct: 65  IFKILNSGDFTQGVKQDDWETKNTQKLTPQISEKALRYDLTVPFARYVVQHQNELIFPFK 124

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GRFR+F QCD D VGS++   + E   +      A+ +K     I
Sbjct: 125 RYQIQPVWRADRPQKGRFREFYQCDADVVGSTSLWQEVEFVQLYDTVFTALNLKG--VTI 182

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL G  E IG    DKL +  + L   DKLDK G +GV   + E          
Sbjct: 183 KINNRKILSGFAEVIG--ESDKLIDFTVAL---DKLDKIGEEGVIKEMIER--------- 228

Query: 228 KGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++ E I  +    ++     + +  L E++K +  G KG  E+  I++ + +    
Sbjct: 229 ---GISHEAISKLQPIFALKGALAEKLTALKEILKTSETGLKGIEEVEFIAQKIEQLTLQ 285

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +  + +  T+ RGL YYTG ++E              V  GS+GGGGRYD L S F  + 
Sbjct: 286 TAILDLDVTLARGLNYYTGAIFEVAAPAG--------VQMGSIGGGGRYDDLTSIFGLKG 337

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G+ R+ + ++ L     ++     VL     ++    S      + LR  G 
Sbjct: 338 ISGIGISFGLDRIGLVMEELNLFPESLSNSIEVLCINFGNNEALQS--MKLLKELRKLGK 395

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           RAE++   +K    Q++YA++R+ P  ++ G  E ++    +KD+ KG +          
Sbjct: 396 RAELYPDVAK-IKKQMEYANKRSIPFVVMIGESELTKNTFVLKDMLKGTQKEYNFNEVNE 454


>gi|282859664|ref|ZP_06268766.1| histidine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587582|gb|EFB92785.1| histidine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 454

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 137/479 (28%), Positives = 220/479 (45%), Gaps = 57/479 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+  RN I D+I+ +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGPEEMAKRNYIFDTIKQVYALYGFQQIETPAMETLQTLMGKYGEEGDKL 63

Query: 65  ---RPNKGVFSLQDDDGQWI---------------SLRYDLTAPLARYVAENFDTIVFPC 106
                N G + L+      +                LRYDLT P ARYV  + + +  P 
Sbjct: 64  LFKILNSGDY-LKSISDDELKERNVLKLQTKLCEKGLRYDLTVPFARYVVMHREELQLPF 122

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       G+      
Sbjct: 123 KRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIIDTVFTQFGV---RVQ 179

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I INNRKIL GI E IG     +  + + +  AIDKLDK GL  V   L           
Sbjct: 180 IKINNRKILTGIAEVIG-----EREKIIDITVAIDKLDKIGLDKVNEEL----------- 223

Query: 227 TKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                ++ E I+ +   + ++   ++ +  + E++K +  G+KG  EL  I + +++SG 
Sbjct: 224 -HADGISEEAIEKLQPIIKLEGTNDEKLDVIAEVLKDSEIGQKGVEELRFILDCLKQSGL 282

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
           N N I++  T+ RGL YYTG ++E          K      GS+ GGGRYD L   F   
Sbjct: 283 N-NEIQLDLTLARGLNYYTGAIFEV---------KALDTQIGSITGGGRYDNLTGIFGMS 332

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +   G S G  R+   L +L+        +    +  ++      +         R AG
Sbjct: 333 GLSGVGISFGADRIYDVLNTLDLYPKE--SVLGTQLLFINFGEKETAYCLPIIAQARNAG 390

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           IR E++  S+K    Q+ YA+ +N     + G  E   G + +K++  G++      + 
Sbjct: 391 IRTEIYPDSAK-MKKQMSYANAKNIQYVALAGETEMEAGKITLKNMTTGEQALISADDL 448


>gi|296826578|ref|XP_002851000.1| histidyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238838554|gb|EEQ28216.1| histidyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 523

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 125/536 (23%), Positives = 220/536 (41%), Gaps = 73/536 (13%)

Query: 1   MGKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M  K K     + P+G  D    +  +R++I  +I N+++ +G   ++TP+ E  + L  
Sbjct: 1   MAPKNKTSFTLKTPKGTKDWAGSDALLRDQIFSTITNVFKRHGGMALDTPVFELREILAG 60

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                  
Sbjct: 61  KYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNTDVRSIKRYHLAKVYRRDQP 117

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAE--MCMMMADTLEAVGIKRNDYHIGINNRKILD 176
               GR R+F QCD D  G+  +    +  +  ++ +  E +G  + +Y I IN+RKILD
Sbjct: 118 AMTKGRMREFYQCDFDIAGAQFDPMVPDSEVMKIVTEVFEDLG-WKGNYTIKINHRKILD 176

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ E  G+  +    +   +  A+DKLDK   + V+  + +              L    
Sbjct: 177 GLFEVCGVPQE----KIRTISSAVDKLDKLPWEDVRKEMVDE-----------KGLDGAV 221

Query: 237 IDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            D + +++     + + E     E +    + + G +++ ++ + +   G   ++I    
Sbjct: 222 ADNIQTYVVRKGGRDLLEYLLADEKLTANASAKAGLDDMSLLLDYLDAFGIL-DKISFDM 280

Query: 294 TIVRGLEYYTGCVYEAI---------------------------LGFPVMNEKQKPVVFG 326
           ++ RGL+YYTG +YE +                           +           V  G
Sbjct: 281 SLARGLDYYTGVIYEVVTEGSAPATATSAPEAQALQRSAKKDKKIDADEDRSNDPSVGVG 340

Query: 327 SVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVA----LKSLESSTNNIKEMGPVLIT 381
           SV  GGRYD LV  F  +  +P  G S G+ R+       L+              V + 
Sbjct: 341 SVAAGGRYDDLVGMFSPKAQIPCVGISFGVDRIFSITKARLERENKKNTLRSSEVDVFVM 400

Query: 382 TMDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
                     L +     + L  AGI+AE           Q K A+  N P A+I G  E
Sbjct: 401 AFGGKGFTGLLKERMQICRSLWEAGIKAEFSYKVKPKLPAQFKAAESNNVPFAVILGEDE 460

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
            + G +++K++         + +    +E     I + I+ LV+ +KK L+   +E
Sbjct: 461 LAAGQVRVKEM--------GLPDGHPEKEG----ILVDITSLVAEIKKGLERKTKE 504


>gi|159125528|gb|EDP50645.1| histidyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           fumigatus A1163]
          Length = 604

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 122/537 (22%), Positives = 207/537 (38%), Gaps = 73/537 (13%)

Query: 1   MGKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M K  K     + P+G  D    ++ +R+RI  +I ++++ +G   ++TP+ E  + L  
Sbjct: 70  MPKDNKNSFNLKTPKGTKDWSGSDVLLRDRIFSTIADVFKRHGGTALDTPVFELREILAG 129

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                  
Sbjct: 130 KYGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPDVRSIKRYHIAKVYRRDQP 186

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
               GR R+F QCD D  G+          + +   +      +  Y I +N+RKILDG+
Sbjct: 187 AVSKGRMREFYQCDFDIAGAFDPMVSDAEVLRIVTEVFEELGWQGRYTIKVNHRKILDGV 246

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E  G+  +    +   +  A+DKLDK     V+  + E              L  E  D
Sbjct: 247 FEVCGVPPE----KIRPISSAVDKLDKMSWADVRKEMVEE-----------KGLHGEVAD 291

Query: 239 IMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            +  +++    + + E     E +    + + G  E+ ++ + +   G   ++I    ++
Sbjct: 292 KIEKYVAGKGARDLLESLWKDESLTANASAKAGLEEMGLLMDYLEAFGCL-DKISFDMSL 350

Query: 296 VRGLEYYTGCVYEAILG------------------------------FPVMNEKQKPVVF 325
            RGL+YYTG +YE +                                          +  
Sbjct: 351 ARGLDYYTGVIYEVVTEGSAPAISSSAPEAQKLQKSGKKDKSKSGNLDDEDRSNDPTLGV 410

Query: 326 GSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVA----LKSLESSTNNIKEMGPVLI 380
           GSV  GGRYD LV  F     +P  G S G+ R+       L+  +S+         V +
Sbjct: 411 GSVAAGGRYDNLVGMFLPKAQIPCVGVSFGVDRIFSITKARLEREKSTEALRSSEVDVFV 470

Query: 381 TTMDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
                      L +     Q L  AGI+AE           Q K A++   P A+I G  
Sbjct: 471 MAFGGKGFTGMLKERMDVCQRLWNAGIKAEFSYKIKPKLPQQFKAAEQGGVPFAVILGED 530

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           E + G ++IK+L                       + + ++ L   VK  L + + +
Sbjct: 531 ELAAGQVRIKEL------------GLEEGHPEKEGVLVDLAALTDEVKARLAKKQSQ 575


>gi|94544923|gb|ABF34971.1| Histidyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 438

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 102/475 (21%), Positives = 177/475 (37%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 13  MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 72

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 73  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 132

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR R+F Q  V+  G++    D E   M     E +GIK    H+       +R      
Sbjct: 133 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRSAYRQA 192

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L++        D   +     +++L  + + D          L  E+  
Sbjct: 193 LIDYLTPMRDQLSK--------DSQRRLDENPLRVLDSKEKEDK---------LAVEKAP 235

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +     +  +++                              I + +VRG
Sbjct: 236 SILDYLDEESQAHFEAVKAMLEAL-----------------------DIPYVIDTNMVRG 272

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL
Sbjct: 273 LDYYNHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERL 324

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++    +     EM    I        + SK     Q +R  G  AE      +   
Sbjct: 325 LMIIEKQGITLPIETEMD---IYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIK 380

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD     L +  G  E   G   IK+    +EL    ++  +  E    Q
Sbjct: 381 AQFKSADTFKAKLVMTLGESEVEAGKAVIKNNRSRQELEVSFEDMMTNFENISEQ 435


>gi|73541773|ref|YP_296293.1| histidyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|83305877|sp|Q46ZI4|SYH_RALEJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|72119186|gb|AAZ61449.1| histidyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 456

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 104/490 (21%), Positives = 191/490 (38%), Gaps = 80/490 (16%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  +G  D    +  +     ++ R +   YG+  I TP++E++    + + +  D   
Sbjct: 25  LQGVKGMNDMLPADAPLWEHFENAARAMLRAYGYQQIRTPIVEHTQLFVRGIGEVTDIVE 84

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++S  D  +G+ ++LR + TA   R   E+      P R +  GP+FR+E+   GR+R
Sbjct: 85  KEMYSFTDALNGEQLTLRPEGTAAAVRATIEHNLLYDGPKRLWYTGPMFRHERPQRGRYR 144

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           QF Q   + +G +    DAE+ +M     + +G              H    +R+ L   
Sbjct: 145 QFHQLGAEALGFAGPDVDAEIILMCQRLWDDLGLTGVRLEINSLGQAHERAAHREELIKY 204

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           LE      D+            D   +     +++L  +                     
Sbjct: 205 LEGFKDILDE------------DGKRRLYTNPLRVLDTKNPALQEMAA---------NAP 243

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ FL  +       +  L+K                         +   KI+  +VRG
Sbjct: 244 KLIDFLGEESLAHFEGVQRLLKAN-----------------------NIPYKINPRLVRG 280

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E I          K    G++ GGGRYD L+++  G+  PA G+++GI R+
Sbjct: 281 LDYYNLTVFEWIT--------DKLGAQGTIAGGGRYDPLIAQMGGKAAPACGWAMGIERI 332

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF---LGSSK 415
           I  ++          +     +  +     +  +  +  + LR AG+   +     G S 
Sbjct: 333 IELIREEGVVP----DAVGCDVYLVHQGEAAQQQATVAAERLRDAGLDVVLHATPDGKSG 388

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +F +Q+K AD      A+I G  E + G++Q+K+L +G +            E    Q  
Sbjct: 389 SFKSQMKRADASGAAYAVIIGEDEVAAGVVQVKELRQGAQ-----------AEGGGQQAQ 437

Query: 476 IPISELVSTV 485
           +P   LV  +
Sbjct: 438 VPAENLVDYL 447


>gi|258648890|ref|ZP_05736359.1| histidine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850916|gb|EEX70785.1| histidine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 455

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 144/485 (29%), Positives = 222/485 (45%), Gaps = 60/485 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKF 59
           M K       +P+G  D    E+  RN I ++IR +Y  YGF  IETP LE   +L GK+
Sbjct: 1   MAK-----PGIPKGTRDFSPVEMARRNYIFNTIREVYALYGFRQIETPALENLSTLMGKY 55

Query: 60  LPDEDR-----PNKGVF----SLQDDDGQWI----------SLRYDLTAPLARYVAENFD 100
             + DR      N G F      +D + + +           LRYDLT P ARYV ++ +
Sbjct: 56  GEEGDRLLFKVLNSGNFMAGLRAEDWNEEKLGHLATLLCEKGLRYDLTVPFARYVVQHRE 115

Query: 101 TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
            I  P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++ +  + + I
Sbjct: 116 EIQLPFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIIDEVFKRLQI 175

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
                 I INNRK+L GI E +G          + +  A+DKLDK G   VK  L     
Sbjct: 176 ---RVCIKINNRKVLSGIAEVLGAADK-----LVEITVAMDKLDKIGWDSVKDEL----- 222

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISEL 278
                    A L  + ++ +   + +  E  + +  L + +  +  G  G +EL  + E 
Sbjct: 223 -------MAAGLDEQAVEKLQPIIELKGENSEKLAVLRDWLSTSPTGLLGVDELAFVFER 275

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
           + K+G   N  ++  ++ RGL YYTGC++E          K   V  GS+ GGGRYD L 
Sbjct: 276 LEKAG-LQNCCELDQSLARGLNYYTGCIFEV---------KALDVEIGSITGGGRYDNLT 325

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
             F    +   G S G  R+   L  L+     I++   V +  ++             +
Sbjct: 326 GIFGLPGLSGVGISFGADRIYDVLNQLDLYPAAIEQ--SVRLLFINFGEAEADYCLQLAR 383

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
             R AGI  E+F  S K    Q+ YA+ RN P   + G  E   G + +KD+  G++ + 
Sbjct: 384 QTRAAGISTEVFPDSVK-MKKQMSYANARNVPYVALVGADEMRDGTVSLKDMVNGEQKTL 442

Query: 459 EIKNN 463
            I+  
Sbjct: 443 SIEEV 447


>gi|304314455|ref|YP_003849602.1| histidyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587914|gb|ADL58289.1| histidyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 427

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 111/486 (22%), Positives = 206/486 (42%), Gaps = 60/486 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRG  D    E+R R  + + +R  +E YG+  I+TP+ E          +E   
Sbjct: 1   MDISRPRGTRDFLFAEMRNRKEVENVLRRTFETYGYHEIKTPIFEDLKLFTVKSGEE--V 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              ++   D  G+ ++LR +LTAP+AR           P + Y  G  FR E+   GRFR
Sbjct: 59  VNQIYHFTDKGGRELALRPELTAPVARLYMNEMQREPKPIKMYYFGSCFRYERPQAGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   + +G  +  A+AE+  + A++L  +G++   + + + +  IL GIL +  +  
Sbjct: 119 QFWQFGCELIGGRSPLAEAEVITLAAESLRRLGLEG--FEVHVGHLGILRGILGRENIGD 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + +                        ++ +G  D       G  ++ E  D++++ +  
Sbjct: 177 ELQDRIMG-------------------IIDKGDVDELESCLDGVEISPESRDLLMNLIGT 217

Query: 247 D-LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + ++++  L++G        +E   + + +   G       ++  I RGL+YYTG 
Sbjct: 218 HGGPEVLNDVRGLLEGYPESLSALDEFAELVDTLEHFGLED--YHVNLGIARGLDYYTGA 275

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E  +         +      + GGG Y  LV  F G+ V +TGF+ G  RL+ AL+  
Sbjct: 276 VFEIYVP--------RLGAQRQICGGGTY-NLVETFGGERVESTGFAFGFDRLMNALE-- 324

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                +  +M  V +  +     +L +    TQ +R+ GI A+M L + +     L +AD
Sbjct: 325 ----MDEGDMRMVDVFVIPIHESTLPEAIRITQEIRSVGIAADMDL-AGRKLRKALSHAD 379

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                  ++ G  +   G + ++D+                     +Q  +  +E+V  +
Sbjct: 380 HIGARFVVLTGERDLHEGKVTLRDMED------------------ASQEAVDRTEIVDRL 421

Query: 486 KKILQE 491
           KKI  E
Sbjct: 422 KKICCE 427


>gi|167569733|ref|ZP_02362607.1| histidyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 446

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 98/498 (19%), Positives = 190/498 (38%), Gaps = 64/498 (12%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + +
Sbjct: 5   KRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ ++LR + TA + R   E+      P R + +GP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYVGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I             
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAHR 184

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +   ++   +L      D   +     +++L  +                 +    +
Sbjct: 185 VELIKYLEQHVAQLD----DDAQRRLYTNPLRVLDTKN---------PALQEIVQNAPKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL          L +L+K                              I+  +VRGL+
Sbjct: 232 IDFLGDASRAHFEGLQKLLKANNL-----------------------PFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++G+ R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNF 417
            LK          E   V +  +     +  +  +  + LR  G+   +     G+  +F
Sbjct: 321 LLKEESLVP----EQEGVDVYVVHQGDAAREQAFVVAERLRDTGLDVVLHCSADGAGASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q+K AD      A+I G  E + G   +K L                   +  Q ++P
Sbjct: 377 KSQMKRADASGAAFAVIFGEDEIANGTASVKPLR-----------GMGAEGEKNVQQSVP 425

Query: 478 ISELVSTVKKILQENKEE 495
           +  L   +   +    E+
Sbjct: 426 VESLTDFLINAMVATAED 443


>gi|320530172|ref|ZP_08031242.1| histidyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137605|gb|EFW29517.1| histidyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 421

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 96/462 (20%), Positives = 179/462 (38%), Gaps = 52/462 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E+     +   IR + + YG+  I TP  E+++   + + D  D 
Sbjct: 1   MLTKAPRGTKDILPGEVGAWTHVERVIRGLCDRYGYKEIRTPHFEHTELFQRGIGDGTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
            +K +++  D   + ++LR + TA   R   E+         + + IG +FR ++   GR
Sbjct: 61  VDKEMYTFTDRGDRSLTLRPENTAAAIRAYLEHKFYADGGLQKLFYIGSMFRYDRPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIG 183
            R+F Q  V+ VG  +   DAE+ ++  D LE +G+      +  +   +      E++ 
Sbjct: 121 MREFHQFGVEAVGEESPAVDAEIILLALDFLEELGLTGLTLKLNAVGCPQCRPAYRERLQ 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  + L E        D  D++    +++L  + + D +  F  GA         +   
Sbjct: 181 AYFKEYLGEL-----CEDCRDRYTRSPLRIL--DCKADAAQPFMAGA-------PAITDC 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +       +   +                               + + +VRGL+YYT
Sbjct: 227 LCAECAAHFDAVQSYLTAA-----------------------GVSYTLDTRLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E                  +V GGGRYDGLV    G   PA GF+ GI R+++AL 
Sbjct: 264 RTAFEIAYP--------PLGAQSAVAGGGRYDGLVEELGGSPTPAVGFAAGIERVLLALT 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +  +   + + +        LR  G+RA M   + ++   Q+K 
Sbjct: 316 QQHLLPEEPPAAD---VFIIALGAAAGAAAFPLLHDLRRGGVRALMDY-AGRSMKAQMKQ 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++     A+I G  E   G   ++D+ +  +    + +   
Sbjct: 372 ANKAGAHYAVILGEDELRSGTAALRDMTESTQEMIPLADMVQ 413


>gi|70993384|ref|XP_751539.1| histidyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           fumigatus Af293]
 gi|66849173|gb|EAL89501.1| histidyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           fumigatus Af293]
          Length = 604

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 122/537 (22%), Positives = 206/537 (38%), Gaps = 73/537 (13%)

Query: 1   MGKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M K  K     + P+G  D    ++ +R+RI  +I ++++ +G   ++TP+ E  + L  
Sbjct: 70  MPKDNKNSFNLKTPKGTKDWSGSDVLLRDRIFSTIADVFKRHGGTALDTPVFELREILAG 129

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                  
Sbjct: 130 KYGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPDVRSIKRYHIAKVYRRDQP 186

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
               GR R+F QCD D  G+          + +   +      +  Y I  N+RKILDG+
Sbjct: 187 AVSKGRMREFYQCDFDIAGAFDPMVSDAEVLRIVTEVFEELGWQGRYTIKANHRKILDGV 246

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E  G+  +    +   +  A+DKLDK     V+  + E              L  E  D
Sbjct: 247 FEVCGVPPE----KIRPISSAVDKLDKMSWADVRKEMVEE-----------KGLHGEVAD 291

Query: 239 IMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            +  +++    + + E     E +    + + G  E+ ++ + +   G   ++I    ++
Sbjct: 292 KIEKYVAGKGARDLLESLWKDESLTANASAKAGLEEMGLLMDYLEAFGCL-DKISFDMSL 350

Query: 296 VRGLEYYTGCVYEAILG------------------------------FPVMNEKQKPVVF 325
            RGL+YYTG +YE +                                          +  
Sbjct: 351 ARGLDYYTGVIYEVVTEGSAPAISSSAPEAQKLQKSGKKDKSKSGNLDDEDRSNDPTLGV 410

Query: 326 GSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVA----LKSLESSTNNIKEMGPVLI 380
           GSV  GGRYD LV  F     +P  G S G+ R+       L+  +S+         V +
Sbjct: 411 GSVAAGGRYDNLVGMFLPKAQIPCVGVSFGVDRIFSITKARLEREKSTEALRSSEVDVFV 470

Query: 381 TTMDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
                      L +     Q L  AGI+AE           Q K A++   P A+I G  
Sbjct: 471 MAFGGKGFTGMLKERMDVCQRLWNAGIKAEFSYKIKPKLPQQFKAAEQGGVPFAVILGED 530

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           E + G ++IK+L                       + + ++ L   VK  L + + +
Sbjct: 531 ELAAGQVRIKEL------------GLEEGHPEKEGVLVDLAALTDEVKARLAKKQSQ 575


>gi|22299441|ref|NP_682688.1| histidyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|32130104|sp|Q8DHP7|SYH_THEEB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|22295624|dbj|BAC09450.1| histidyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 428

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 104/481 (21%), Positives = 198/481 (41%), Gaps = 56/481 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    E      +    R I +   +  I TP+ E +    + + +  D 
Sbjct: 1   MGLQAPRGTRDILPAERVYWQYLETIARQILDRAAYREICTPIFEQTPLFERGIGEATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
            +K +++ +D   + ++LR + TA + R   E+         R + +GP+FR E+   GR
Sbjct: 61  VSKEMYTFRDRAQRSLTLRPEGTAGVVRAYIEHGLHSQGGVQRLWYLGPMFRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIG 183
           +RQF Q  V+ +GS+   ADAE+  +  D L+A+G+K+    +    +R+      + + 
Sbjct: 121 YRQFHQLGVEVLGSADPRADAEVIAVALDILQALGLKQLTLMLNSVGDREDRSAYRQALV 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +      +        D  ++     +++L  +     +           ++   ++ +
Sbjct: 181 DYLTPYKADLD-----PDSQERLHRNPLRILDSKDPRTQA---------IVKEAPRLLDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS        ++  L++                             +I+  +VRGL+YYT
Sbjct: 227 LSARSRAHFEQVQSLLQALGIA-----------------------YQINPALVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E         +       G+V GGGRYD LV    G   PA G+++G+ RLI+ L+
Sbjct: 264 HTAFEF--------QDMSLGNEGTVCGGGRYDHLVEELGGPPTPAIGWAMGLERLILLLR 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                   +       +  +   + +  +  +  Q LR  G   ++ L S   FG Q+K 
Sbjct: 316 DR-----PLPARNQPYLYMVTRGAAAERQGLILAQQLRHQGYTVDVDL-SGSAFGKQVKR 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           ADR    + ++ G  E + G +Q+K LA G+++    +   S  E   ++   P   L+S
Sbjct: 370 ADRVGATVCLVIGESEATDGTVQVKWLASGEQVLVPQQELLS--ENWRSRFLTPHDGLLS 427

Query: 484 T 484
            
Sbjct: 428 H 428


>gi|306834557|ref|ZP_07467670.1| histidine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|296777684|gb|ADH43101.1| histidyl-tRNA synthetase [uncultured bacterium MID12]
 gi|304423359|gb|EFM26512.1| histidine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 425

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 100/467 (21%), Positives = 177/467 (37%), Gaps = 60/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPSESAKWQYVEAVARETFKKYNYSEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSFVENKLFAPEVQKPVKMYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V+  GS+    D E   M     + +GIK    H+       +R      
Sbjct: 121 GRLREFHQVGVECFGSANPATDVETIAMAYQLFQILGIKDVTLHLNTLGSAVSRSAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        ++L++        D   +     +++L  + + D          +  E   
Sbjct: 181 LIDYLTPMREQLSK--------DSQRRLDENPLRVLDSKEKEDK---------IAVENAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +     +  +++                         +    I + +VRG
Sbjct: 224 SILDYLDDESQAHFDAVRSMLETL-----------------------NIPYVIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I                ++  GGRYD LV  F G   P  GF++G+ RL
Sbjct: 261 LDYYNHTIFEFITTVDKSE--------LTICAGGRYDSLVEYFDGPETPGFGFALGLERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+         KEM  V I  +   ++   K     Q +R  G  AE      +   
Sbjct: 313 LLILEKQGIELPVEKEMD-VYIAVLGQGANL--KALELVQAVRNQGFSAERDY-LGRKIK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            Q K AD  N    I  G  E   G + +K+    +E++       +
Sbjct: 369 AQFKSADAFNAKTIITLGESEIEAGQVAVKNNKTREEVTVSFDEIAN 415


>gi|156549684|ref|XP_001605112.1| PREDICTED: similar to LOC445827 protein [Nasonia vitripennis]
          Length = 502

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 124/492 (25%), Positives = 214/492 (43%), Gaps = 53/492 (10%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            KL  + P+G  D   +++ +R   +D I  I+  +G + I+TP+ E  + L     ++ 
Sbjct: 50  QKLLLKTPKGTRDYNPEQMALRLSAMDKIVAIFRKHGAETIDTPIFELKEVLTGKYGED- 108

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K ++ L+D  G+ ++LRYDLT P ARY+A N  T +             N     GR
Sbjct: 109 --SKLIYDLKDQGGEILALRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPAMTKGR 165

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F QCD D  G          C+ +        +    + I +N+R +LDGI    G+
Sbjct: 166 YREFYQCDFDIAGQYDPMLPDSECLRIIYEALK-SLNLGPFTIKVNHRCLLDGIFATCGV 224

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +    +   +  A+DKLDK               +   +  +   L  +  D + +++
Sbjct: 225 PQE----KFRSICSAVDKLDKSPW-----------EEVKKEMVEEKGLDEKIADRIGTYV 269

Query: 245 S----IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           S     DL + + +  +L+K   +  +G N + ++ +         + +    ++ RGL+
Sbjct: 270 SKSGGRDLVEELRKDADLLKQ-PSAVEGINSMELLLKYCEIFKIM-DNLVFDLSLARGLD 327

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG ++EA+L           +  GSV GGGRYD L  +   K +NVP  G S+GI R+
Sbjct: 328 YYTGVIFEAVLTGDN-------IGVGSVAGGGRYDNLVGMFDPKNKNVPCVGMSLGIERI 380

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              L++  ++         V +       +   +  +    L  A I+AE     S    
Sbjct: 381 FSVLETSIANRGMKTRTTEVQVFVATAQKNLHEERMLILAELWEANIKAEQSYKKSPKLL 440

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            QL++ +    PLAII G GE  RG + ++++   +E S                  IP 
Sbjct: 441 AQLQHCEEYGIPLAIIVGEGELKRGEVTLRNVKTREEAS------------------IPR 482

Query: 479 SELVSTVKKILQ 490
           + LV  +KK L 
Sbjct: 483 ANLVEELKKKLD 494


>gi|332162635|ref|YP_004299212.1| histidyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318606739|emb|CBY28237.1| histidyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666865|gb|ADZ43509.1| histidyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 450

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 96/470 (20%), Positives = 179/470 (38%), Gaps = 68/470 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + + +  D  
Sbjct: 30  NIQAIRGMNDYLPADTAIWQRIEGILKQVLAGYGYSEIRMPIVEQTPLFKRAIGEVTDVV 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+   GR+R
Sbjct: 90  EKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYERPQKGRYR 149

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDG 177
           QF Q   +  G      DAE+ ++ A    A+G                   + R+ L  
Sbjct: 150 QFHQLGAEVFGLQGPDIDAELILLTARWWRALGISEHVQLELNSIGSLDARADYREALVT 209

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE+     D+            D   +     +++L  +              L     
Sbjct: 210 FLEQHVDVLDE------------DCKRRMYSNPLRVLDSKN---------PDVQLLLNDA 248

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  +L  + ++    L EL+                               ++  +VR
Sbjct: 249 PKLSDYLDDESKQHFAGLCELL-----------------------NQAGIPYTVNERLVR 285

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ R
Sbjct: 286 GLDYYNRTVFEWVTNS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLER 337

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           L++ ++++       K    + +  +     + S      + +R     ++     G   
Sbjct: 338 LVLLVQAVN---PEFKVPATIDVYLISSGEGTQSAAMQLAERVRDVLPTLKLMTNYGGG- 393

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           NF  Q+  AD+    +A+I G  E +   + +KDL  G++ +    +  +
Sbjct: 394 NFKKQITRADKWGARVALILGESEVAAQQVVVKDLRNGEQETLAQADVAA 443


>gi|172037888|ref|YP_001804389.1| histidyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|226710879|sp|B1WVZ0|SYH_CYAA5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|171699342|gb|ACB52323.1| histidyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 433

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 103/472 (21%), Positives = 182/472 (38%), Gaps = 60/472 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +   G  D   +EI     +      I     +  I  P+ E +    + + +  D  
Sbjct: 3   TIQTLPGTRDILPEEIGYWQYVETVATQILSRAMYYEIRPPIFEQTSLFERGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D   + ++LR + TA + R   +N         R +  GP+FR E+   GR 
Sbjct: 63  GKEMYTFSDRGDRSLTLRPEGTAGVVRAYLQNNLYAAGGVQRLWYCGPMFRYERPQAGRQ 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEK 181
           RQF Q  ++ +G++   AD E+  +  D L+ +G++     I      N+R+     L  
Sbjct: 123 RQFHQIGLELIGTADPRADVEVIALATDILKTLGLQSLKLDINSVGDRNDRQNYREALVN 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             L    +L+         D  D+     +++L  + +              ++    ++
Sbjct: 183 YFLPYKAELD--------TDSQDRLQRNPLRILDSKDKRTKE---------INQNAPSIL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L    +K   ++ +L+                               I+  +VRGL+Y
Sbjct: 226 EHLGDASKKHFDQVQQLLTDL-----------------------GIEYNINPCLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E I                +V GGGRYDGLV    G   PA G++IG+ RLI+ 
Sbjct: 263 YTHTAFEMI--------SDDLGAQATVCGGGRYDGLVEELGGNPTPAVGWAIGMERLIIL 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           LK L+SS +   +     I  +     +  +  +  Q LR  G+  E+ + S   FG Q 
Sbjct: 315 LKQLQSSPDMTPD-----IYIVSRGEAAEGQGLILAQKLRKEGLTVELDM-SGSAFGKQF 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K ADR      I+ G  E +   +Q+K L   ++ +       +     + Q
Sbjct: 369 KRADRSGAIACIVLGEEEATNKTVQLKWLQSKEQQAMTQAELLTKVGELIEQ 420


>gi|167581706|ref|ZP_02374580.1| histidyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 446

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 105/499 (21%), Positives = 198/499 (39%), Gaps = 66/499 (13%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + +
Sbjct: 5   KRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ ++LR + TA + R   E+      P R + IGP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         G+ E
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSL------GLAE 178

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +   H  + +         +D   +  L    L + + +     +  + A         +
Sbjct: 179 ERAAHRVELIKYLEQHADKLDDDAQRRLYTNPLRVLDTKNPALQEIVRNA-------PKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL          L  L+K                         +    I+  +VRGL+
Sbjct: 232 IDFLGDVSRAHFEGLQRLLKAN-----------------------NVPFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNF 417
            LK          E   V +  +     +  +  +  + LR  G+   +     G+  +F
Sbjct: 321 LLKEEHLVP----EQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQITI 476
            +Q+K AD      A+I G  E + G   +K L   G +  + +            Q ++
Sbjct: 377 KSQMKRADASGAAFAVIFGEDEVANGTASVKPLRGTGDDGEKSV------------QQSV 424

Query: 477 PISELVSTVKKILQENKEE 495
           P+  L   +   +    E+
Sbjct: 425 PVESLTEFLINAMVATAED 443


>gi|303326110|ref|ZP_07356553.1| histidine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302864026|gb|EFL86957.1| histidine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 418

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 184/468 (39%), Gaps = 54/468 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           +     +GFAD    +     R+ +  R+I+  YGF  + TPL+E+++   + +  + D 
Sbjct: 1   MSIARIKGFADMFPPQSDNFTRMENCARDIFGRYGFVELRTPLVEFTELFQRSIGEETDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ ++LR + TA + R   E+         R +  GP+FR E+   GR
Sbjct: 61  VQKEMYTFPDRKGRSLTLRPEATAGVMRAYIESGLNSREAVSRLFTTGPMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q + + +G+ +  ADAE+ +M+   L A+G+K     +            ++  L
Sbjct: 121 MRQFHQINCECLGTQSPLADAELIIMLMRFLRALGLKDLGLKLNSLGCAECRPRFKEALL 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              + L          D   +     +++L  +           G    ++    ++ + 
Sbjct: 181 ---EYLRGVDRNALCPDCARRVDSNPLRVLDCKQ---------PGCRALTDNAPKLLDYN 228

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +       + E+++      +  + L                       VRGL+YY  
Sbjct: 229 CPECRAHFETVLEMLRAEDLPLELDHRL-----------------------VRGLDYYCR 265

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +                +V GGGRYDGL+    G +VP  GF+ G+ RL + L  
Sbjct: 266 TTFEVV--------SGSIGAQSAVAGGGRYDGLIKSLGGPDVPGVGFACGMERLALLL-- 315

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                             +  +    ++     Q LR AG+R EM   +   F + ++ A
Sbjct: 316 ------GDDAETRPDFYLLGIEEAGRAQAFALAQKLRAAGLRGEMNFSTGG-FKSLMRQA 368

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +      +I G  E ++  + IK L  G++ S    +   + +A  A
Sbjct: 369 GKSGARFCLIIGPDEAAQNNVTIKHLDSGEQRSMPQADAILYLQAGTA 416


>gi|306826462|ref|ZP_07459773.1| histidine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304431321|gb|EFM34319.1| histidine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 438

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 98/471 (20%), Positives = 172/471 (36%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 13  MKLQKPKGTQDILPGDAAKWQYVESVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 72

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 73  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 132

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  G++    D E   M     E +GIK    H+               
Sbjct: 133 GRLREFHQIGVECFGAANPATDVETIAMAYHLFEKLGIKDVTLHLNSLGSPESRA---AY 189

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D L      L   D   +     +++L  + + D          L  E+   ++ 
Sbjct: 190 RQALIDYLTPMRGQLS-KDSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILD 239

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                         +    I + +VRGL+YY
Sbjct: 240 YLDEESQAHFEAVKDMLEAL-----------------------NIPYVIDTNMVRGLDYY 276

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL++ +
Sbjct: 277 NHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMVI 328

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    +        + SK     Q +R  G  AE      +    Q K
Sbjct: 329 EKQGITLPIETEMD---VYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIKAQFK 384

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     L +  G  E   G   IK+    +E+    ++          Q
Sbjct: 385 SADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVSFEDMMINFANISEQ 435


>gi|288906393|ref|YP_003431615.1| histidyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306832440|ref|ZP_07465593.1| histidine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325979407|ref|YP_004289123.1| HTH-type transcriptional regulator [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288733119|emb|CBI14700.1| histidyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304425480|gb|EFM28599.1| histidine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325179335|emb|CBZ49379.1| HTH-type transcriptional regulator [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 425

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 99/461 (21%), Positives = 174/461 (37%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPSESAKWQYVEAVARETFKKYNYSEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSFVENKLFAPEVQKPVKMYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E   M     + +GIK    H+             + 
Sbjct: 121 GRLREFHQVGVECFGSANPATDVETIAMAYQLFQTLGIKDVTLHLNTLGSAASRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + E+L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPMREQL----SKDSQRRLDENPLRVLDSKEKEDK---------IAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     +  +++                         +    I + +VRGL+YY
Sbjct: 228 YLDDESQAHFDAVRSMLETL-----------------------NIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I                ++  GGRYD LV  F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFITTVDKSE--------LTICAGGRYDSLVEYFDGPETPGFGFGLGLERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +         KEM  V I  +   ++   K     Q +R  G  AE      +    Q K
Sbjct: 317 EKQGIELPVEKEMD-VYIAVLGQGANL--KALELVQAIRNQGFSAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD  N    I  G  E   G + +K+    +E++      
Sbjct: 373 SADAFNAKTIITLGESEIEAGQVAVKNNKTREEVTVSFDEI 413


>gi|168181745|ref|ZP_02616409.1| histidine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796511|ref|YP_002864063.1| histidyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259511940|sp|C3KTB7|SYH_CLOB6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|182675096|gb|EDT87057.1| histidine--tRNA ligase [Clostridium botulinum Bf]
 gi|229261383|gb|ACQ52416.1| histidine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 415

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 100/468 (21%), Positives = 189/468 (40%), Gaps = 62/468 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + +  RNI  ++G   I TP+ EY++   + + +  D 
Sbjct: 1   MSLQAPKGTKDLLPTESYKWQYLENKFRNIAADFGCREIRTPVFEYTELFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + T+P  R   E        P + Y   PV R E    GR
Sbjct: 61  VQKEMYTFEDKAGRSITLKPEGTSPAVRAFVEGRLFNETQPTKMYYFTPVMRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQ  Q  ++  G+   + DAE+  +     + +G++      +       RK  +  L+
Sbjct: 121 LRQHHQFGIEIFGAKEASVDAEVISIPVRIYKELGVEGVELNINSIGCPKCRKTYNEALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K      DKL              +F    +++L  + + D   +  K A +       +
Sbjct: 181 KYLSKNYDKL--------CSTCKTRFDKNPLRIL--DCKVDTCKEIVKDAPI-------I 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++  + ++    L   +                          +   KI   IVRGL+
Sbjct: 224 LDYICGECKEHFESLKNYLD-----------------------VLNINYKIDPFIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+  V+E I                ++  GGRYD L+    G ++PA GF +G+ RL++
Sbjct: 261 YYSKTVFEFITDD------------ITICAGGRYDYLIEEIGGPSMPAVGFGMGMERLLL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+        I E   V +   +    +  +     + LR   I+ E+     K+   Q
Sbjct: 309 TLQEK---AIEIPEEAYVDLYLGNMGDKAKLEVLKLAKELRDRHIKCEIDH-MGKSVKAQ 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +KYA+R     +++ G  E + G   IK +  G+++  +IK+ ++  +
Sbjct: 365 MKYANRIGAKYSMVLGEEELNTGKATIKKMEDGQQIEVDIKDIDTLIK 412


>gi|119499988|ref|XP_001266751.1| histidyl-tRNA synthetase, mitochondrial precursor [Neosartorya
           fischeri NRRL 181]
 gi|119414916|gb|EAW24854.1| histidyl-tRNA synthetase, mitochondrial precursor [Neosartorya
           fischeri NRRL 181]
          Length = 604

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 122/537 (22%), Positives = 206/537 (38%), Gaps = 73/537 (13%)

Query: 1   MGKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M K  K     + P+G  D    +  +R+RI  +I ++++ +G   ++TP+ E  + L  
Sbjct: 70  MPKDNKNSFNLKTPKGTKDWSGSDALLRDRIFSTIADVFKRHGGTALDTPVFELREILAG 129

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                  
Sbjct: 130 KYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRSIKRYHIAKVYRRDQP 186

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
               GR R+F QCD D  G+          + +   +      +  Y I +N+RKILDG+
Sbjct: 187 AVSKGRMREFYQCDFDIAGAFDPMVPDAEILRIVTEVFEELGWQGRYTIKVNHRKILDGV 246

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E  G+  +    +   +  A+DKLDK     V+  + E              L  E  D
Sbjct: 247 FEVCGVPPE----KIRPISSAVDKLDKMPWADVRKEMVEE-----------KGLDGEVAD 291

Query: 239 IMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            +  +++    + + E     E +    + + G  E+ ++ + +   G   ++I    ++
Sbjct: 292 RIEKYVAGKGARDLLESLWKDESLTANASAKAGLEEMGLLMDYLEAFGCL-DKISFDMSL 350

Query: 296 VRGLEYYTGCVYEAILG------------------------------FPVMNEKQKPVVF 325
            RGL+YYTG +YE +                                          +  
Sbjct: 351 ARGLDYYTGVIYEVVTEGSAPAVSSSAPEAQKLQKSGKKDKSKSGNLEDEDRSNDPTLGV 410

Query: 326 GSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVA----LKSLESSTNNIKEMGPVLI 380
           GSV  GGRYD LV  F     +P  G S G+ R+       L+  +S+         V +
Sbjct: 411 GSVAAGGRYDNLVGMFLPKAQIPCVGVSFGVDRIFSITKARLEREKSAEALRSSEVDVFV 470

Query: 381 TTMDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
                      L +     Q L  AGI+AE           Q K A++   P A+I G  
Sbjct: 471 MAFGGKGFTGMLKERMDVCQKLWNAGIKAEFSYKIKPKLPQQFKAAEQGGVPFAVILGED 530

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           E + G ++IK+L                       + + ++ L   VK  L + + +
Sbjct: 531 ELAAGQVRIKEL------------GLEEGHPEKEGVLVDLAALTDEVKARLAKKQSQ 575


>gi|260773384|ref|ZP_05882300.1| histidyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612523|gb|EEX37726.1| histidyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 412

 Score =  251 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 103/459 (22%), Positives = 186/459 (40%), Gaps = 61/459 (13%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             DC   +  +  ++ ++++N+   YG+  +  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDCLPTQSPLWQKVENAVKNVVSAYGYSEVRMPIVEMTPLFSRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D +G  +SLR + TA   R   E+        R + IGP+FR+E+   GR+RQF QC V
Sbjct: 61  ADRNGDSLSLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQCGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGLHGDD 188
           +  G      DAE+ MM A     +GI  +     +    +  R      L +      D
Sbjct: 121 EVFGIDGPDVDAELIMMTARLWRELGIAEHVRLELNSIGSLAARADYRSALIEYLEQHQD 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
            L+E        D   +     +++L  +     S                +  +L  + 
Sbjct: 181 VLDE--------DCKRRMYTNPLRVLDSKNPDVQS---------ILGDAPELADYLDAES 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++    L EL+                               ++  +VRGL+YY   V+E
Sbjct: 224 KQHFSGLCELLDAA-----------------------GIEYTVNQRLVRGLDYYNRTVFE 260

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            I         +     G+V GGGRYDGLV +  G+  PA GF++G+ RL++ +++L ++
Sbjct: 261 WIT--------ESLGSQGTVCGGGRYDGLVEQLGGKATPAVGFAMGLERLVLMMETLGNT 312

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADR 426
                    V +  +     +        + LR    G+R  M      NF  Q K AD+
Sbjct: 313 DVRRS----VDVYIVTAGEGTTMAGMKLAEQLREQVPGLRV-MNHCGGGNFKKQFKRADK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
               +A++ G  E +   + +KDL  G++ +    +  S
Sbjct: 368 VGAAVALVLGENEIAEKTVVLKDLLGGQQTTLSQTDIAS 406


>gi|299140764|ref|ZP_07033902.1| histidine--tRNA ligase [Prevotella oris C735]
 gi|298577730|gb|EFI49598.1| histidine--tRNA ligase [Prevotella oris C735]
          Length = 454

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 141/481 (29%), Positives = 224/481 (46%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I ++I+++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGPEEMAKRNYIFNTIKDVYALYGFQQIETPAMETLQTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWIS---------------LRYDLTAPLARYVAENFDTIVF 104
            K +F + +          + +S               LRYDLT P ARYV  + + +  
Sbjct: 62  -KLLFKILNSGDYLNKVTDEELSERNPLHLASKLCEKGLRYDLTVPFARYVVMHREELQL 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       G+    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTKFGV---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L         
Sbjct: 178 VQIKINNRKILTGIAEVIG-----EADKIVDITVAIDKLDKIGLDNVNAELKAD------ 226

Query: 225 DFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I+ +   +S++   E  ++ + ++++G+  G KG  E   I + ++ +
Sbjct: 227 ------GISDEAIEKLQPIISLEGTNEDKLNTIAKVLEGSDVGLKGVEETKFILDTLKVT 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G N N I++  T+ RGL YYTG ++E          K      GS+ GGGRYD L   F 
Sbjct: 281 GLN-NEIQLDLTLARGLNYYTGAIFEV---------KALDTPMGSITGGGRYDNLTGIFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +   G S G  R+   L +L+           VL           +    +    R 
Sbjct: 331 MPGLSGVGISFGADRIYDVLNALDLYPKEAVNATQVLFINFGEKET--AYCLPFVAKARK 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIR E+F   +K    Q+ YA+ +N P  ++ G  E + G L +KD+  G++    I  
Sbjct: 389 AGIRTEIFPDKAK-MKKQMGYANAKNIPYVVLAGENEINEGKLMLKDMQTGEQTLITIDE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|134094492|ref|YP_001099567.1| histidine tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|133738395|emb|CAL61440.1| histidine tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Herminiimonas arsenicoxydans]
          Length = 448

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 101/487 (20%), Positives = 189/487 (38%), Gaps = 72/487 (14%)

Query: 1   MGKKTKL-RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M    K  +    +G  D    +  +     +++  + ++YGF  I TP++E +    + 
Sbjct: 1   MSDTKKTEKIVGVKGMNDILPADAPLWELFENTVHTVLKSYGFQQIRTPIVEPTALFARG 60

Query: 60  LPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           L    D   K ++S  D  +G  ++LR + TA + R   E+  T   P R +  GP+FR+
Sbjct: 61  LGAVTDIVEKEMYSFTDSMNGDELTLRPECTASVVRAALEHNLTYDGPKRLWYSGPMFRH 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGI 169
           E+   GR+RQF Q   + +G S    DAE+ MM     + +G            +     
Sbjct: 121 ERPQRGRYRQFHQIGAEAIGFSGPDIDAELIMMCQRLWDDLGLQDVRLELNSIGNAEERN 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L    E+     D +  +RL                +++L  +            
Sbjct: 181 KHRADLISYFEQHAELLDAEAQKRLHS------------NPLRILDTKNPAMQEM----- 223

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     ++ +L  D       + +++                        +N+   
Sbjct: 224 ----VNAAPKLLDYLGEDSRAHFEGVQKIL-----------------------NHNAIPF 256

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRG++YY   V+E +          +    G+V GGGRYD LV  F G+  PA 
Sbjct: 257 TINPRLVRGMDYYNRTVFEWVT--------DQLGSQGTVCGGGRYDPLVEMFGGKPTPAC 308

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++G+ RL+  +K+               +  +     +  +  +  + LR AG+   +
Sbjct: 309 GFAMGVERLLELMKASG----EKFTPNQCDVYIVHQGEPAQLQASVVAERLRDAGLDVVL 364

Query: 410 FLGSS---KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK--GKELSREIKNNE 464
              +S    +F +Q+K AD      A+I G  E ++G   +K++    GK+     +   
Sbjct: 365 HCAASAGIGSFKSQMKRADNSGAAYAVIIGEDEIAKGAAVVKEMRDAEGKQSEVAFEGIA 424

Query: 465 SWREARV 471
            +   ++
Sbjct: 425 DYLVDQI 431


>gi|184155308|ref|YP_001843648.1| histidyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|227514593|ref|ZP_03944642.1| histidine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|260662178|ref|ZP_05863074.1| histidyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|229558691|sp|B2GBY6|SYH_LACF3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|183226652|dbj|BAG27168.1| histidyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|227087004|gb|EEI22316.1| histidine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|260553561|gb|EEX26453.1| histidyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|299783163|gb|ADJ41161.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Lactobacillus fermentum CECT 5716]
          Length = 431

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 100/468 (21%), Positives = 175/468 (37%), Gaps = 65/468 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G AD    + +    +    R I++ YG+  I TPL E  D   +   D  D 
Sbjct: 1   MRYQRPKGTADILPGDSQTWQYVEGQARQIFKTYGYQEIRTPLFESYDIFSRSAGDTSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++  +D   + I+LR + TA + R   EN         P + Y IGP+FR E+   
Sbjct: 61  VTKEMYDFKDKGDRHIALRPEGTAGVVRAFVENKLYGPEFNKPYKVYYIGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKI 174
           GR R+F Q  V+  G+     D E+  M     + +G            D     N R+ 
Sbjct: 121 GRQREFHQIGVEAFGADNPAVDVEVITMALRFFKKLGLSDLRVAVNSLGDQESRANYRQA 180

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   L+       +            D  ++     +++L  +   D             
Sbjct: 181 LIDYLKPHYDELSE------------DSKERLEKNPLRVLDSKDERDQQF---------V 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E    ++ +L+    +   ++ E++                               + +T
Sbjct: 220 ENAPSILDYLTPAAAERFDQVKEMLDSLGID-----------------------YVVDAT 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   ++E ++    +          ++ GGGRY GLV    G + P  GF IG
Sbjct: 257 MVRGLDYYNHTIFEVMVKAKSLGHGYT-----TICGGGRYSGLVEELGGPDEPGVGFGIG 311

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RLI+ L         +     + +  +     +  +        R AG+ AE     +
Sbjct: 312 LERLILLLGDEGV---ELPTEDGLDVYVVGIGEATNLESFRLVTAARDAGLVAERDY-LN 367

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           +    Q K A +    + +  G  E   G +  K +A GKE+S  + +
Sbjct: 368 RKPKAQFKTAAKEGAKVTLTVGQREIEEGTVHFKVMATGKEVSVPLAD 415


>gi|332664006|ref|YP_004446794.1| Histidyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332332820|gb|AEE49921.1| Histidyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 448

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 141/481 (29%), Positives = 229/481 (47%), Gaps = 64/481 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR 65
           ++     G  D    ++  RN I D+IR+++  +G+ PIETP +E   +L GK+  + DR
Sbjct: 1   MKPSTAEGTRDFTPDQVLKRNYIFDTIRSVFVKFGYLPIETPAMENLSTLSGKYGEEGDR 60

Query: 66  PNKGVFSLQDDDGQWI-----------------------SLRYDLTAPLARYVAENFDTI 102
               +F +  ++G+++                        LRYDLT P AR+V  + + +
Sbjct: 61  L---LFKIL-NNGEYLKGISPDDISSKAYKTVTPALAKRGLRYDLTVPFARFVVMHQNEL 116

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
            FP + Y+I PV+R ++   GR+R+F QCDVD VGS++   +AE+  +  +    + +  
Sbjct: 117 TFPFKRYQIQPVWRADRPQKGRYREFYQCDVDVVGSTSLVYEAELVQIYDEVFSKLNLP- 175

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN 222
               I  NNRKIL+GI E  G+         + +  AIDKLDK GL G+K  +GE     
Sbjct: 176 --VVIKFNNRKILEGIAEVAGIPE-----RMVEMTVAIDKLDKIGLDGIKKEMGER---- 224

Query: 223 SGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                    +    I  +   LSI   +S+ EL   ++ +  G+ G  E+  + + +  +
Sbjct: 225 --------GIDDAAIATITQILSI---QSLDELQSALESSERGKLGIQEVQALLQYL-GT 272

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G     I+   T+ RGL YYTGC++E          + K V  GS+GGGGRYD L   F 
Sbjct: 273 GQTQQDIRFDITLARGLNYYTGCIFEV---------QAKGVAMGSIGGGGRYDNLTGVFG 323

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            ++V   G S G  R+   L+ L+    +      + +  M  D  +          LR 
Sbjct: 324 LKDVSGVGVSFGAERIYDVLEELKLFPADTSN--SLKVLFMAFDEAAHLYAFAALGKLRA 381

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AG+ +E++    K    Q+KYA+ R  P  ++ G  E S G+L  K++  G++    I+ 
Sbjct: 382 AGVNSEIYPDPGK-IKKQMKYANDRQVPFVVLVGEEEMSSGLLSFKNMQSGEQEKLTIEE 440

Query: 463 N 463
            
Sbjct: 441 I 441


>gi|308070357|ref|YP_003871962.1| histidyl-tRNA synthetase 2 (histidine--tRNA ligase 2)
           [Paenibacillus polymyxa E681]
 gi|305859636|gb|ADM71424.1| Histidyl-tRNA synthetase 2 (Histidine--tRNA ligase 2)
           [Paenibacillus polymyxa E681]
          Length = 414

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 172/463 (37%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P G  D     +     + +  R I   + +  I TP+ E ++   + + +  D 
Sbjct: 1   MAFQKPTGTQDLLPGSVEKWQVVEEKAREISRRFNYREIRTPMFEQTNLFVRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + ++LR + TA + R   EN         + Y IGP+FR E+   GR
Sbjct: 61  VEKEMYTFEDKGKRSMTLRPEGTAGVVRSYVENKLYGEPDVTKLYYIGPMFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q  ++  G+     DAE+          +G+K     I                 
Sbjct: 121 QRQFHQFGIEAFGAVDPALDAEVIAFGYQFCRELGLKGVQVEINSVGNAASRA---AYRQ 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H  D L      L   +   +     +++L  +   D  G    GA    + +D      
Sbjct: 178 HLVDFLMPIKDTL-TKESQARIERNPLRVLDSKDDQDKFG----GAPSILDSLD------ 226

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                                E+       + + +   G       ++  +VRGL+YYT 
Sbjct: 227 ---------------------EESRTHFEKVKQNLDAMG---VEYTVNPRLVRGLDYYTL 262

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E         + +      ++GGGGRY+GLV    G + P  GF IG+ R+ + L+ 
Sbjct: 263 TAFEF--------KAEGIGAIDTIGGGGRYNGLVGDLGGPDQPGIGFGIGLERIQLILEH 314

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                N  K +   ++        + ++       LR AG  AE      +    Q+K A
Sbjct: 315 QGVKLNEAKPLDIYMV---ALGEAAETEVTKQLFKLRQAGFSAERDY-LGRKMKAQMKSA 370

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           DR       I G  E ++G + +K++  G++ + ++       
Sbjct: 371 DRFKARYTAILGEDELAQGEIALKNMETGEQRTVKLDQLVEEL 413


>gi|207723165|ref|YP_002253564.1| histidyl-trna synthetase (histidine--trna ligase)(hisrs) protein
           [Ralstonia solanacearum MolK2]
 gi|207743443|ref|YP_002259835.1| histidyl-trna synthetase (histidine--trna ligase)(hisrs) protein
           [Ralstonia solanacearum IPO1609]
 gi|206588359|emb|CAQ35322.1| histidyl-trna synthetase (histidine--trna ligase)(hisrs) protein
           [Ralstonia solanacearum MolK2]
 gi|206594840|emb|CAQ61767.1| histidyl-trna synthetase (histidine--trna ligase)(hisrs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 423

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 104/493 (21%), Positives = 188/493 (38%), Gaps = 83/493 (16%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    +  +     +++R++   YG+  I TP++E++    + + +  D   K ++S 
Sbjct: 1   MNDLLPGDAPLWEHFDNAVRSMLRAYGYQQIRTPIVEHTQLFVRGIGEVTDIVEKEMYSF 60

Query: 74  QDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D  +G+ ++LR + TA   R V E+      P R +  GP+FR+E+   GR+RQF Q  
Sbjct: 61  TDSLNGEQLTLRPEGTAAAVRAVIEHNLLYDGPKRLWYTGPMFRHERPQRGRYRQFHQVG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEKIGL 184
           V+ +G +    DAE+ +M     + +G                   +R  L   LE    
Sbjct: 121 VEALGFAGPDIDAEVILMCQRLWDDLGLVGLKLELNSLGQAEERAAHRADLIKYLEDFQD 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D+            D   +     +++L  +                      ++ +L
Sbjct: 181 ILDE------------DSKRRLYTNPLRVLDTKNPALQEMAAG---------APKLIDYL 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                K    +  L+K                         +    I+  +VRGL+YY  
Sbjct: 220 GEASLKHFEGVQALLKAN-----------------------NIPYTINPRLVRGLDYYNL 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E            K    G+V GGGRYD L+ +  G+  PA G+++G+ R+I  L+ 
Sbjct: 257 TVFEWTT--------DKLGAQGTVAGGGRYDPLIEQIGGKPAPACGWAMGVERIIELLRE 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNFGNQL 421
            + +           +  +     +  +  +  + LR AG+   +     G + +F +Q 
Sbjct: 309 EKLAPEPQ----GCDVYIVHQGDQAQVQALVAAERLRDAGLDVILHCSPEGRNGSFKSQF 364

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K AD      A+I G  E + G+ QIK L  G+                  Q T+P  +L
Sbjct: 365 KRADASGASYAVIIGDDEVAAGVAQIKPLR-GE-------------PNADTQQTVPSDQL 410

Query: 482 VSTVKKILQENKE 494
           V  +   +  N +
Sbjct: 411 VDRLIDAMVANSD 423


>gi|210623798|ref|ZP_03294058.1| hypothetical protein CLOHIR_02009 [Clostridium hiranonis DSM 13275]
 gi|210153380|gb|EEA84386.1| hypothetical protein CLOHIR_02009 [Clostridium hiranonis DSM 13275]
          Length = 420

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 108/487 (22%), Positives = 184/487 (37%), Gaps = 71/487 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + PRG  D   K+    N + +  R I   YG+  + TP+ E+++   + + D  D 
Sbjct: 1   MLTKAPRGTKDITPKDSYKWNYLENKFREICALYGYQEMRTPIFEHTELFQRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
             K ++S +D   + I+L+ + TA   R   EN       P + + I P FR E+   GR
Sbjct: 61  VQKEMYSFKDKGDREITLKPEGTAGAVRAFIENKLYADTQPTKMFYITPCFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIG 183
            RQF Q  ++ +GS + + DAE   +       +G+K     +             +K+ 
Sbjct: 121 QRQFHQFGIEAIGSDSPSMDAEAISLAMQFFRELGLKDLKVSLNSVGCPVCRKEYDKKLR 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            + D K      +            +   + + + +     +           I  M+  
Sbjct: 181 EYLDSKSEVLCDMC-------NERKEKNPMRVIDCKNPQCKEAITD-------IPYMIDN 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +    EL E +K                             +I  TIVRGL+YY 
Sbjct: 227 LCDDCKAHFAELEEYLKEME-----------------------IPYEIDKTIVRGLDYYK 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-VPATGFSIGISRLIVAL 362
              +E I         +      +V GGGRYDGLV +  G       GF++G  RL++ L
Sbjct: 264 RTAFEII--------AENIGAQSTVCGGGRYDGLVEQLGGPKGTSGIGFALGAERLLLTL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +       N +      I  +    ++  K     + LR   I A+     S++   Q K
Sbjct: 316 EDAGIEIENPQSTD---IFIVTIGDEAKKKSFGLLKELRDNHISADKDH-LSRSVKAQFK 371

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           Y+D+ N    I+ G  E       +K++A  ++                   T+ +SELV
Sbjct: 372 YSDKINAKFTIVIGDDELKNNEASLKNMATSEQ------------------HTVKLSELV 413

Query: 483 STVKKIL 489
             +K+ L
Sbjct: 414 KELKERL 420


>gi|315123115|ref|YP_004065121.1| histidyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315016875|gb|ADT70212.1| histidyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 426

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 107/485 (22%), Positives = 199/485 (41%), Gaps = 73/485 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   + ++  ++   +R    ++G+  I  P++E +D   + +
Sbjct: 1   MAKQ----IQAVRGMNDCLPGDTQVWQKVEHILRETVSSFGYQEIRFPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFADRNGDNLTLRPEGTAVCVRAGNENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  ++  G ++   DAE+ ++ A   EA GI                   
Sbjct: 117 PQKGRYRQFHQFGLETFGIASADIDAEVILLTAQLWEAFGISDHVRLELNSLGSNEARAQ 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +    +       A
Sbjct: 177 YRDALIAFLEQHTDVLDE------------DSKRRMYSNPLRVLDTK--NPDIQAILVDA 222

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
              SE +D                            +       + E +  +G    +  
Sbjct: 223 PKLSEHLDT---------------------------ESKEHFENLCERLDAAG---VKYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G++ PA G
Sbjct: 253 VNEKLVRGLDYYNRTVFEWVT--------DSLGAQGTVCAGGRYDGLVEQLGGKSTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE   +  +      +        +  +  +    LR    G+R  
Sbjct: 305 FAMGLERLVLLLQALECVGDIRRSTD---VYLAAMGDKASIQAPIIASTLRRDVPGLRV- 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWR 467
           M      NF  QLK AD+ +  +A+I G  E  +G++ IK L +  ++++ E++  ++  
Sbjct: 361 MVHAGGGNFKKQLKRADKSDALVAVIIGEDELEQGVVTIKYLRERKEQVTLELEQAKALL 420

Query: 468 EARVA 472
              + 
Sbjct: 421 AELIN 425


>gi|238027072|ref|YP_002911303.1| histidyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237876266|gb|ACR28599.1| Histidyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 446

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 100/499 (20%), Positives = 193/499 (38%), Gaps = 64/499 (12%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+   +    +G  D   ++  +      + +++   YG+  I TP++E++    + + 
Sbjct: 4   TKRKLEKLTGVKGMNDILPQDAALWEFFEATAKSLLRAYGYQNIRTPIVEHTQLFTRGIG 63

Query: 62  D-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +  D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR+E+
Sbjct: 64  EVTDIVEKEMYSFTDSLNGENLTMRPENTAAVVRASIEHNLLYDGPKRLWYIGPMFRHER 123

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I            
Sbjct: 124 PQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEERAAH 183

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +   ++  ++L      D   +     +++L  +                ++    
Sbjct: 184 RVELIKYLEQFADQLD----EDAKRRLYTNPLRVLDTKN---------PALQEIAQNAPK 230

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ FL          L  L+K                         +    I+  +VRGL
Sbjct: 231 LIDFLGDTSRAHFEGLQRLLKAN-----------------------NVPFTINPRLVRGL 267

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI R++
Sbjct: 268 DYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERIL 319

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKN 416
             LK  +       E   V +  +     +  +  +  + LR  G+         G+S +
Sbjct: 320 ELLKEEQLVP----EQDGVDVYIVHQGEAAREQAFIIGERLRDTGLDVIFHCSADGASAS 375

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           F +Q+K AD      A+I G  E + G + +K L                   +  Q T+
Sbjct: 376 FKSQMKRADASGAAYAVILGEDEVANGTVGVKALR-----------GAGADGEKSEQQTV 424

Query: 477 PISELVSTVKKILQENKEE 495
            +  L   +   +  + E+
Sbjct: 425 TVENLTEFLINAMVASAED 443


>gi|195567547|ref|XP_002107321.1| GD17398 [Drosophila simulans]
 gi|194204727|gb|EDX18303.1| GD17398 [Drosophila simulans]
          Length = 568

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 113/487 (23%), Positives = 214/487 (43%), Gaps = 39/487 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++
Sbjct: 100 NQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED 159

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     G
Sbjct: 160 ---SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTKG 215

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+         C+ +   +    +   DY I +N+R++LDG+ +  G
Sbjct: 216 RYREFYQCDFDIAGTYDPMLPDAECVKIVSEILDT-LDIGDYVIKLNHRQLLDGMFQACG 274

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  D        +  A+DKLDK     V+  + +              L     D +  +
Sbjct: 275 VPADS----FRTICSAVDKLDKSPWADVRKEMVDE-----------KGLDEAAADRIGEY 319

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +     + E     E +K      KG   +  + +     G +  R+    ++ RGL+
Sbjct: 320 VRLSGGAELVEQLLADEKLKAVPNAVKGLEGMKQLLKYCSIFGLDK-RVSFDLSLARGLD 378

Query: 301 YYTGCVYEAILGFP-------------VMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQN 345
           YYTG +YE +L                   +  +P   GSV GGGRYD L  +   +G+ 
Sbjct: 379 YYTGVIYEGVLKGESATVASPAKTSQQNGEQANEPATVGSVAGGGRYDNLVGMFDPRGKA 438

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           VP  G SIG+ R+   L++  +++        V +           +      +L  AG+
Sbjct: 439 VPCVGVSIGVERIFSVLEARAAASGLKLRTSDVEVYVASAHKGLHEQRLKVLNLLWDAGV 498

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +AE     +     QL++ +    PL ++ G  E ++G+++++++   +E + ++++  +
Sbjct: 499 KAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKLREVTTREETNVKLEDLAA 558

Query: 466 WREARVA 472
               R  
Sbjct: 559 EIRRRQQ 565


>gi|28211584|ref|NP_782528.1| histidyl-tRNA synthetase [Clostridium tetani E88]
 gi|32130099|sp|Q892X7|SYH_CLOTE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|28204025|gb|AAO36465.1| histidyl-tRNA synthetase [Clostridium tetani E88]
          Length = 439

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 140/462 (30%), Positives = 218/462 (47%), Gaps = 34/462 (7%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK  ++  +  GF +    +  + N++ D+IR+ YE +GF P++TP +E S+ L      
Sbjct: 2   KKDIVKPSILPGFMELLPADQIVFNKMKDTIRHNYEKFGFIPLDTPTIEKSEILLAKGGG 61

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           E    K ++         +SLR+DLT PLARYV+++F  + FP R Y I  VFR E++  
Sbjct: 62  E--TEKQIYRFN-KGNTDLSLRFDLTVPLARYVSQHFSDLNFPFRRYHISKVFRGERNQK 118

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GRFR+F QCD+D +G+ + +   +  +          +   D+ I INNRK+L+G  E  
Sbjct: 119 GRFREFYQCDIDIIGNGSLSIINDAEIPSIIYQTFKELGFEDFTIRINNRKVLNGFFEGT 178

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +           VLRAIDK++K G  GV+  L E              L   +ID +++
Sbjct: 179 DVEDR------KGVLRAIDKIEKIGEDGVRKELQE------------LGLEDSKIDKIIN 220

Query: 243 FLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           F++I   KS  +  L EL       ++G  EL  +   ++         KI  TI RGL+
Sbjct: 221 FINIKGTKSEVIKSLKELDIENDVFKEGVYELEKVVHYIKSFNVPDKNYKIDLTIARGLD 280

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYE +L              GSV  GGRYD L   +  Q +P  G SIG++RL  
Sbjct: 281 YYTGTVYETVLNNY--------PQIGSVCSGGRYDNLAEHYTNQKLPGVGISIGLTRLFY 332

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+  +    N        +       D++         LR   I +E++L  +K  G +
Sbjct: 333 QLREAKIIGENASSTLSQALVI--PVGDTMEYSIKVANKLRENEIISELYLEDAK-IGKK 389

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             YAD+   P  I+ G  E     + +K++  G + S  ++ 
Sbjct: 390 FAYADKLKIPYVILIGEDELKEEKVSVKNMETGNQESMSLEE 431


>gi|296875422|ref|ZP_06899496.1| histidine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296433615|gb|EFH19388.1| histidine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 430

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 101/477 (21%), Positives = 181/477 (37%), Gaps = 60/477 (12%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-E 63
             ++ + P+G  D    +      +    R ++  Y +D I TP+ E+ + + + + D  
Sbjct: 2   KAMKLQKPKGTQDILPGDSAKWQYVEGFARKVFARYHYDEIRTPIFEHYEVISRSVGDTT 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKH 120
           D   K ++   D   + I+LR + TAP+ R   EN           + Y IGP+FR E+ 
Sbjct: 62  DIVTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPSKFYYIGPMFRYERP 121

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILD 176
             GR RQF Q  V+  GSS    D E   M A  L+ +GI       +      +R+   
Sbjct: 122 QAGRLRQFHQIGVECFGSSNPATDVETIAMAAQFLKELGIDNVILHLNTLGSPASRQAYR 181

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L    L   D+L++        D   +     +++L  + + D +           EQ
Sbjct: 182 QALIDYLLPMKDQLSK--------DSQRRLEENPLRVLDSKEKEDKA---------AVEQ 224

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ +L  + +     +  +++                              I + +V
Sbjct: 225 APSILDYLDEESQAHFDAVRRMLEDLGVA-----------------------YVIDTNMV 261

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   ++E I         +      +V  GGRYDGLV  F G      GF IG+ 
Sbjct: 262 RGLDYYNHTIFEFIT--------EIEGNELTVCAGGRYDGLVEYFGGPATAGFGFGIGVE 313

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+++ L+        +     +         +         Q LR  G +AE      + 
Sbjct: 314 RILLVLEKKGI---ELPIETGLDAYIAVLGDEVNEAALSLVQALRIQGFKAERDY-LGRK 369

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              Q K AD       I  G+ E   G + +K+    +E++  +++ +    + +A+
Sbjct: 370 LKAQFKSADVFAAKALITLGSSEVESGQVTVKNNQTRQEVTVALESLKKDFPSVLAE 426


>gi|170017024|ref|YP_001727943.1| histidyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803881|gb|ACA82499.1| Histidyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 434

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 112/500 (22%), Positives = 195/500 (39%), Gaps = 73/500 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T    + P+G AD   ++      I    R ++ +Y F  I TPL E  D   +  
Sbjct: 1   MAKPT---FQKPKGTADLLPEQTAQWQHIESIARLLFGDYNFREIRTPLFENFDVFSRSA 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFR 116
            D  D   K ++   D   + I+LR + TA + R   EN         P + + IGP+FR
Sbjct: 58  GDTSDVVTKEMYDFHDKGNRHIALRPEGTAGVVRAYVENKLYGPEFDKPYKAFYIGPMFR 117

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY-HIGINNRKIL 175
            E+   GRFRQF Q  V+  G++A   D E+  M  D  + +G+K        + ++   
Sbjct: 118 YERPQAGRFRQFHQIGVEAFGATAPALDVEIIAMAVDFFQTLGLKNLKVAINTLGDQASR 177

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           +   + +  +     +E      + D   +     +++L  +   D             E
Sbjct: 178 EAYRKALIAYLKPHFDEL-----SPDSQARLEKNPLRVLDSKDPRDQVF---------VE 223

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++ FLS D  +    + EL+                              ++ ST+
Sbjct: 224 DAPSILDFLSDDSSQHWQTVQELLTAL-----------------------DITFEVDSTM 260

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   ++E +     +          ++ GGGRY GLV+ F G   P  GF IG+
Sbjct: 261 VRGLDYYNDTIFEIMTVDDSLKGAA------TIAGGGRYSGLVAEFGGPETPGVGFGIGV 314

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RLI  L +   +         +    ++  + +        Q +R+ G  AE      +
Sbjct: 315 ERLISLLATQGVAPVKD---DGLDFYVVNIGTSTNVVATQIVQAIRSFGYVAERDY-LGR 370

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +  +Q K ADR +    +  G  E +  ++ IK++A G                   Q T
Sbjct: 371 SAKSQFKSADRHHSRYVVTVGETELANHVVNIKNMATG------------------MQQT 412

Query: 476 IPISELVSTVKKILQENKEE 495
           + +++L + +  I+    +E
Sbjct: 413 VKLADLYTDLPTIIDSQGDE 432


>gi|116075543|ref|ZP_01472802.1| histidyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116066858|gb|EAU72613.1| histidyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 445

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 100/487 (20%), Positives = 190/487 (39%), Gaps = 61/487 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   ++      +    R  ++ +G   I TPLLE ++   + + +  D  
Sbjct: 3   QLQSLRGMVDLLPEQTCRWQAVEAVARVHFQRWGCREIRTPLLEVTELFARGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ QD   +  +LR + TA + R   +N        R +  GP+FR E+   GR R
Sbjct: 63  GKEMYTFQDRGDRSCTLRPEGTASVVRSALQNGLLSQGAQRLWYGGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLH 185
           QF Q  V+ +G S+  +DAE+  +  D L  +G++     I               +   
Sbjct: 123 QFHQIGVEWLGVSSAASDAEVIALAWDLLADLGVEGLALEINSLGTPDDRLAYRTCLVEW 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + + ++        D   +     +++L  +     +    + A L  + +        
Sbjct: 183 LEARRDQLD-----ADSQQRLSTNPLRILDSKH--PQTKALLEEAPLLEQSL-------- 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                                     L     +++     +   + +  +VRGL+YY   
Sbjct: 228 ----------------------APESLARHQAVLQALDALAIPYQCNPRLVRGLDYYGHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E            +     +V GGGRYDGLV +  G   PA G+++G+ RL++ L++ 
Sbjct: 266 AFEIT--------SDQLGAQATVCGGGRYDGLVQQLGGAATPAIGWALGMERLLLVLEAA 317

Query: 366 -----ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                +     + +     +  ++    +L    + T+ LR+ G+  E    S   FG Q
Sbjct: 318 ATANPDGRAAQLVQAATPDVYVVNRGEQALQAALVLTRQLRSCGLAVERD-ESGSAFGKQ 376

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            K ADR     A++ G  E  RG+++IK L      +    +  + ++ R       +  
Sbjct: 377 FKRADRSGAAFALVLGDEEAERGVVRIKPLK-----AVPDADGLADQQDRSLN---DLPA 428

Query: 481 LVSTVKK 487
           LV  +KK
Sbjct: 429 LVEALKK 435


>gi|51893560|ref|YP_076251.1| histidyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81692042|sp|Q67LN9|SYH_SYMTH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|51857249|dbj|BAD41407.1| histidyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 432

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 104/482 (21%), Positives = 180/482 (37%), Gaps = 66/482 (13%)

Query: 7   LRAELPRGFADCPTKE------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           +  + PRGF D    E           R+ +  R +   YG+  +  P++EY D     +
Sbjct: 1   MSIQAPRGFNDILPGEQYGWRDSYRWQRLEEIFREVARLYGYQELRPPMVEYVDLFIHGV 60

Query: 61  P-DEDRPNKGVFSLQ----DDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPV 114
               D   K +F++     D D + +++R + TA L R   EN       P + +  GP 
Sbjct: 61  GATTDIVTKEMFNITPRGDDPDARRMAMRPEFTAGLVRAWLENGLYNNPQPTKIFAYGPA 120

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGIN 170
           FR E    GRFR F Q DV+  G+     DAE+  +  D +  +G+       +      
Sbjct: 121 FRYENVQKGRFRGFHQLDVEVFGAQDPAVDAEVIKLGLDVVARLGLTGLVVSVNSIGCPQ 180

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R      L+        +L          D   +F    ++LL  +   D+    T   
Sbjct: 181 CRPRYRQALQDHFRPHLGEL--------CEDCNTRFEKNPLRLLDCKRDADHPAQRT--- 229

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   + + +L  D  +    L   +                              +
Sbjct: 230 ------APVTLDYLCDDCRRHWEGLLSHLAA-----------------------MGIPYQ 260

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I + IVRGL+YYT  V+E +          K     ++ GGGRYDGL+    G+  P  G
Sbjct: 261 IDTRIVRGLDYYTKTVFEVL--------HPKLGAQSALWGGGRYDGLIEIVGGKPTPGVG 312

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F +G+ R+++ L+    +     +   + +        +          LR AG+ A++ 
Sbjct: 313 FGMGMERVLMVLEEEGLTA-PFADRPRLDVFVATLGEAARPVGLKLLYALRDAGLSADID 371

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               ++   Q+KYA ++N    +I G  E  +G+  +K + +G + S  +    S     
Sbjct: 372 Y-LGRSLKAQMKYAGKQNSRYVVILGEDEVRQGVASVKHMDEGTQESVPLDQIISHLRRA 430

Query: 471 VA 472
            A
Sbjct: 431 EA 432


>gi|313201446|ref|YP_004040104.1| histidyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312440762|gb|ADQ84868.1| histidyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 418

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 101/460 (21%), Positives = 183/460 (39%), Gaps = 61/460 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  +GF D   ++  +  ++ D+ R +   YG+  I  P++E +D   + + +  D  
Sbjct: 4   KFQSIKGFYDILPEQTALWQKLEDTARQVLGQYGYRNIRMPIVEPTDLFIRSVGEHTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G  ++LR + TA   R V E+  T   P R + +GP+FR+E    GR 
Sbjct: 64  EKEMYSWVDALNGDKLTLRPEGTAGCVRAVVEHSLTYNGPQRLWYMGPMFRHENVQKGRQ 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEK 181
           RQF Q  V+  G +    DAE  M++A    A+G+     + +       R     +L  
Sbjct: 124 RQFHQIGVEAFGYAQPEVDAEQIMLLARLWRALGLTDVELQLNTIGDAAERAEYRQVLIA 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D L+E        D   +     +++L  +     +           E    ++
Sbjct: 184 YFEQHADLLDE--------DAKRRLHTNPLRILDSKNPRMQAMI---------EGAPRLL 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L  +       +  L+K                         +    +++ +VRGL+Y
Sbjct: 227 DTLGGESRAHFDAVCALLKAA-----------------------NIPFVLNTRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +          +    G++ GGGRYD LV R  G   PA GF IG+ R+ + 
Sbjct: 264 YNRTVFEWVTT--------RLGSQGTIAGGGRYDTLVERLGGDATPACGFGIGLERVFLL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++          +        ++    +        + LR AGI   +      +F +Q+
Sbjct: 316 MQEYGIEATQGLDG-----YLVNLGEQAERLAPQVAEQLRDAGISVALH-TGGGSFKSQM 369

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDL-AKGKELSREI 460
           K ADR     A+I G  E   G + +K +   G++   ++
Sbjct: 370 KKADRSGARFALILGDEEAQAGQITLKPMLGGGEQQRLDL 409


>gi|226950484|ref|YP_002805575.1| histidine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254782324|sp|C1FKE6|SYH_CLOBJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226843187|gb|ACO85853.1| histidine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 415

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 100/468 (21%), Positives = 189/468 (40%), Gaps = 62/468 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + +  RNI  ++G   I TP+ EY++   + + +  D 
Sbjct: 1   MSLQAPKGTKDLLPTESYKWQYLENKFRNIAADFGCREIRTPVFEYTELFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + T+P  R   E        P + Y   PV R E    GR
Sbjct: 61  VQKEMYTFEDKAGRSITLKPEGTSPAVRAFVEGRLFNETQPTKMYYFTPVMRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQ  Q  ++  G+   + DAE+  +     + +G++      +       RK  +  L+
Sbjct: 121 LRQHHQFGIEIFGAKDASVDAEVISIPVGIYKELGVEGVELNINSIGCPKCRKTYNEALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K      DKL              +F    +++L  + + D   +  K A +       +
Sbjct: 181 KYLSKNYDKL--------CSTCKTRFDKNPLRIL--DCKVDTCKEIVKDAPI-------I 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++  + ++    L   +                          +   KI   IVRGL+
Sbjct: 224 LDYICGECKEHFESLKNYLD-----------------------VLNINYKIDPFIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+  V+E I                ++  GGRYD L+    G ++PA GF +G+ RL++
Sbjct: 261 YYSKTVFEFITDD------------ITICAGGRYDYLIEEIGGPSMPAVGFGMGMERLLL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+        I E   V +   +    +  +     + LR   I+ E+     K+   Q
Sbjct: 309 TLQEK---AIEIPEEAYVDLYLGNMGDKAKLEVLKLAKELRDRHIKCEIDH-MGKSVKAQ 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +KYA+R     +++ G  E + G   IK +  G+++  +IK+ ++  +
Sbjct: 365 MKYANRIGAKYSMVLGEEELNTGKATIKKMEDGQQIEVDIKDMDTLIK 412


>gi|326478994|gb|EGE03004.1| histidyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 527

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 127/534 (23%), Positives = 216/534 (40%), Gaps = 73/534 (13%)

Query: 1   MGKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M  K K     + P+G  D    +  +R+ I  +I N+++ +G   ++TP+ E  + L  
Sbjct: 1   MAPKGKNSFTLKTPKGTKDWAGPDALLRDNIFSTITNVFKRHGGMALDTPVFELREILAG 60

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                  
Sbjct: 61  KYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRNIKRYHLAKVYRRDQP 117

Query: 119 KHGPGRFRQFIQCDVDNVG--SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
               GR R+F QCD D  G       AD+E+  ++ +  E +G  + +Y I +N+RKILD
Sbjct: 118 AMTKGRMREFYQCDFDIAGSQFDPMVADSEVLKIVTEVFEDLG-WKGNYTIKVNHRKILD 176

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ E  G+  D    +   +  A+DKLDK   + V+  + +              L    
Sbjct: 177 GLFEVCGVPQD----KIRTISSAVDKLDKLPWEDVRKEMVD-----------DKGLDGAV 221

Query: 237 IDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            D +  ++     + + E     E +    + + G +++ ++ E +   G   ++I    
Sbjct: 222 ADSIQKYVVRKGGRDLLESLLADEKLTANASAKAGLDDMALLLEYLEDFGVV-DKISFDM 280

Query: 294 TIVRGLEYYTGCVYEAILGF---------------------------PVMNEKQKPVVFG 326
           ++ RGL+YYTG +YE I                                       V  G
Sbjct: 281 SLARGLDYYTGVIYEVITEGSAPATATSAPEAQALQRSAKKDKKVDPDEDRSNDPSVGVG 340

Query: 327 SVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKSLESSTNNIK--EMGPVLITTM 383
           SV  GGRYD LV  F  +  +P  G S G+ R+    K+      N        V +  M
Sbjct: 341 SVAAGGRYDELVGMFSPKAQIPCVGVSFGVDRIFSITKARMQREKNANALRSSEVDVYVM 400

Query: 384 DHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
                     L +     + L  AGI+AE           Q K A+    P A+I G  E
Sbjct: 401 AFGGKGFTGLLKERMQICRSLWEAGIKAEFSYKVKPKLPAQFKAAEANGIPFAVILGEDE 460

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            + G +++K++         + +    +E     + + I  L + +K+ L++  
Sbjct: 461 LAAGKVRVKEM--------GLPDGHPEKEG----VLVDIDSLTTEIKQRLEKKA 502


>gi|301301210|ref|ZP_07207366.1| histidine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851209|gb|EFK78937.1| histidine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 431

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 101/471 (21%), Positives = 176/471 (37%), Gaps = 65/471 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G AD    E      + +  R +++ Y ++ + TP+ E  +   +   +  D 
Sbjct: 1   MKYQRPKGTADILPSESAKWQYVEEKARELFKKYRYEEMRTPIFESFEVFSRTSGETSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P +TY +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAGVVRSFVENKLYGPEVQKPFKTYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKI 174
           GR R+F Q  V+  G    T D E+  M  D L++ G+           D     N R+ 
Sbjct: 121 GRLREFHQIGVEAFGVDNPTLDVEVMAMAVDLLKSFGLNSLRVAVNTLGDLETRNNYRQA 180

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   LE       D            D  ++     +++L  +   D             
Sbjct: 181 LIDYLEPFEAELSD------------DSKERLHKNPLRVLDSKDEKDKE---------IV 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L+ D +K    +  L+                               I S 
Sbjct: 220 ANAPSILDYLTEDAQKHFETVKSLLNDL-----------------------GIEYVIDSN 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   ++E +      N K   V       GG Y GLV +  G   P  GF +G
Sbjct: 257 MVRGLDYYNHTIFEIMSDSKAFNGKWTTV-----CAGGHYSGLVEQLGGPQTPGVGFGLG 311

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL++ L + E +      +    +  +     + +      Q LR  G  A+     +
Sbjct: 312 VERLLLILDAEEDALPIENPLD---VYVVGIGDVTNAATLKLVQNLRHQGFTADRDY-LN 367

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +    Q K A+R N    +  G  E       +K +  G E+S ++ + E+
Sbjct: 368 RKPKGQFKSANRLNARFTLTIGETELQEQEANLKFMENGNEISVKLADVEN 418


>gi|224000828|ref|XP_002290086.1| histidyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220973508|gb|EED91838.1| histidyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 508

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 110/459 (23%), Positives = 193/459 (42%), Gaps = 37/459 (8%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P+G  D    ++R+R  +    R +   YGF   + P+LE      +   +E    + +
Sbjct: 83  PPKGTRDFYPPDMRLRTWLFSQWRIVASLYGFSEYDAPVLESESLYTRKAGEE--VTQQL 140

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++  D   + ++LR ++T  LAR V      +  P + + I   +R E+   GR R+  Q
Sbjct: 141 YNFVDKGDRNVALRPEMTPSLARMVMAKKGGLPLPLKWFSIPQCWRYERMTRGRRREHYQ 200

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
            ++D  G     A+AE+   M    + VG+   D  I +N+R ++  +L+++G+  +   
Sbjct: 201 WNMDIWGVDGIEAEAELLSAMVMFFKRVGLTSEDVGIKVNSRGVIGEVLKELGVPEE--- 257

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            +       +DKL+K  L  ++  L E              L    I+ + S L+    +
Sbjct: 258 -KFAATCVLVDKLEKVPLDAIQGELEE------------LGLEKSTIEKLTSVLTNTSIE 304

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           S+  +         G     +L  + +L    G  ++ I   +++VRGL YYTG V+EA 
Sbjct: 305 SISAVL------PPGSDAVKQLSQLFKLCEAYGI-ADWILFDASVVRGLAYYTGIVFEAF 357

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                     +  V  ++ GGGRYD L+  F G+  PA GF  G + ++  LK  +    
Sbjct: 358 ---------DRKGVLRAIAGGGRYDKLLETFGGEPTPAAGFGFGDAVIVELLKERDVLP- 407

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
              E             D           LR  G   ++ L  +K      K+A R    
Sbjct: 408 -SFEGSGFDTVVFAMSEDLFGVAVQVASTLRQNGQSVDLIL-ENKKPKWVFKHASRNEAK 465

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             +I    E   G + +KDLA G+++S +I   +SW + 
Sbjct: 466 YCVIVAGDEYKNGEVSVKDLALGEQMSVKIDALDSWAKE 504


>gi|307152174|ref|YP_003887558.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306982402|gb|ADN14283.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 430

 Score =  250 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 102/489 (20%), Positives = 193/489 (39%), Gaps = 69/489 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D   +E+    ++      I     +  I TP+ E +    + + +  D   
Sbjct: 4   IQALRGTRDILPQEVSYWQQVESVAAQILSRALYQEIRTPIFEQTSLFERGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D   + I+LR + TA + R + E+         R +  GP+FR E+   GR R
Sbjct: 64  KEMYTFKDRGDRSITLRPEGTAGVVRCLIEHNLYASGGVQRLWYKGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLH 185
           QF Q  V+ +GS+   AD E+  +  D L+A+G+K     +    NR+      + +  +
Sbjct: 124 QFHQIGVELLGSADYRADVEVIALATDILQALGLKNLKLDLNSVGNREDRQNYRQALVNY 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 +        D  ++     +++L  +   + +     GA         ++ +L 
Sbjct: 184 LTPYKPQLD-----PDSQERLERNPLRILDSKD--EQTRAICSGA-------PSIIDYLG 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + ++   ++ +L+                          +   +I+  +VRGL+YYT  
Sbjct: 230 TESKRHFEQVQQLLTDL-----------------------AIPYQINPCLVRGLDYYTHT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E         +  +     +V GGGRYDGLV+   G   PA G++IG+ RLI+     
Sbjct: 267 AFEI--------QSDELGAQATVCGGGRYDGLVAELGGPETPAVGWAIGMERLIL----- 313

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                       +    +     + S+  +  Q LR AG+  E+ L S   FG Q K AD
Sbjct: 314 LLQQLQQAPNFNLDFYIVSRGETAESQGLILAQKLRHAGLTVELDL-SGSAFGKQFKRAD 372

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           R      +I G  E +   +Q+K +   ++ +   +   +                   +
Sbjct: 373 RSGAAATLILGDEEAANQTVQLKWMMTKEQQTLTQEELLTQLP---------------EL 417

Query: 486 KKILQENKE 494
           K+ L  +K+
Sbjct: 418 KQSLDRHKQ 426


>gi|153940828|ref|YP_001392333.1| histidyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|166227962|sp|A7GHS3|SYH_CLOBL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|152936724|gb|ABS42222.1| histidine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320326|gb|ADG00704.1| histidine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 415

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 100/468 (21%), Positives = 189/468 (40%), Gaps = 62/468 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + +  RNI  ++G   I TP+ EY++   + + +  D 
Sbjct: 1   MSLQAPKGTKDLLPTESYKWQYLENKFRNIAADFGCREIRTPVFEYTELFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + T+P  R   E        P + Y   PV R E    GR
Sbjct: 61  VQKEMYTFEDKAGRSITLKPEGTSPAVRAFVEGRLFNETQPTKMYYFTPVMRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQ  Q  ++  G+   + DAE+  +     + +G++      +       RK  +  L+
Sbjct: 121 LRQHHQFGIEIFGAKDASVDAEVISIPVGIYKELGVEGVELNINSIGCPKCRKTYNEALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K      DKL              +F    +++L  + + D   +  K A +       +
Sbjct: 181 KYLSKNYDKL--------CSTCKTRFDKNPLRIL--DCKVDTCKEIVKDAPI-------I 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++  + +     L   +                            + K+   IVRGL+
Sbjct: 224 LDYICDECKDHFESLKSYLD-----------------------VLDIKYKVDPFIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+  V+E I+               ++  GGRYD L+    G ++PA GF +GI RL++
Sbjct: 261 YYSKTVFEFIIDD------------ITICAGGRYDYLIEEIGGPSMPAVGFGMGIERLLL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+        I E   V +   +    +  +     + LR   I+ E+     K+   Q
Sbjct: 309 TLQEK---AIEIPEEAYVDLYLGNIGDKAKLEVLKLAKELRDRHIKCEIDH-MGKSVKAQ 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +KYA+R     +++ G  E + G + +K +  GK++  +IK  ++  +
Sbjct: 365 MKYANRIGAKYSMVLGEEELNTGKVSLKRMEDGKQIEVDIKEIDTLIK 412


>gi|322783273|gb|EFZ10857.1| hypothetical protein SINV_08930 [Solenopsis invicta]
          Length = 608

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 115/491 (23%), Positives = 209/491 (42%), Gaps = 49/491 (9%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           KL  + P+G  D   +++ +R  +L+ I ++++ +G + I+TP+ E  D L     ++  
Sbjct: 163 KLILKTPKGTRDYNPEQMALRLGVLEKIISVFKRHGAETIDTPVFELKDVLTGKYGED-- 220

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +K ++ L+D  G+ ++LRYDLT P ARY+A N  + +             N     GR+
Sbjct: 221 -SKLIYDLKDQGGEILALRYDLTVPFARYLAMNKISSIKRYHIA-KVYRRDNPATTKGRY 278

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F QCD D  G        ++  +         +    Y I +N+R +LDGI     + 
Sbjct: 279 REFYQCDFDIAGQYD-PMLPDVECIKVVCEALEALNLGSYLIKVNHRSLLDGIFAACSVP 337

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 +   +  A+DKLDK   + VK  + +              L     D +  ++ 
Sbjct: 338 QS----KFRSICSAVDKLDKSPWEEVKKEMIDE-----------KGLDDHIADKVGKYVL 382

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS--NRIKISSTIVRGLEYYT 303
                 +       K  +        L  I  L++  G     ++IK   ++ RGL+YYT
Sbjct: 383 QSGGVELIAELRKDKELMKQTVAVQGLDSIELLLKYCGIYKILDKIKFDLSLARGLDYYT 442

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVA 361
           G +YEAIL           +  GSV GGGRYD L  +   K + VP  G S+G+ R+   
Sbjct: 443 GVIYEAILCGDN-------IGVGSVAGGGRYDNLVGMFDSKNKMVPCVGVSLGVERIFSV 495

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +++  ++         + +       +   +       L  AG++AE     +     QL
Sbjct: 496 MEAKLANKGLKTRAAEIEVFVASAQKNLHEERMKILADLWEAGVKAEQSYKKNAKLLAQL 555

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           ++ +    PLAII G GE ++G + ++ ++  ++                    +P S L
Sbjct: 556 QHCEENGIPLAIIVGEGELAQGEVTLRVVSTREQT------------------RVPRSNL 597

Query: 482 VSTVKKILQEN 492
           +  +++ L+ +
Sbjct: 598 IEEIRRQLKTS 608


>gi|238753874|ref|ZP_04615234.1| Histidyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238707862|gb|EEQ00220.1| Histidyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 414

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 98/459 (21%), Positives = 181/459 (39%), Gaps = 60/459 (13%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    +  +  RI  +++ +  +YG+  I  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDYLPADTALWQRIEGTLKQVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D +G+ ++LR + TA   R   E+        R + IGP+FR E+   GR+RQF Q   
Sbjct: 61  DDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYERPQKGRYRQFHQLGA 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGLHGDD 188
           +  G      DAE+ ++ A   +A+GI  +     +    +  R      L        D
Sbjct: 121 EVFGLQGPDIDAELILLTARWWKALGISEHVHLELNSIGSLAARADYREALIAFLEQHQD 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
            L+E        D   +     +++L  +                  +   +  +L  D 
Sbjct: 181 ILDE--------DCKRRMYSNPLRVLDSKNPEIQQ---------LLNEAPRLSEYLDEDS 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++    L EL+                        +      ++  +VRGL+YY   V+E
Sbjct: 224 KQHFSGLCELLD-----------------------HAGIPYSVNERLVRGLDYYNRTVFE 260

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            +               G+V  GGRYDGLV +  G+  PA GF++G+ RL++ ++++   
Sbjct: 261 WVTTS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVN-- 310

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADR 426
                    V I  +     + S      + LR A   ++     G   NF  Q   AD+
Sbjct: 311 -PEFAPQPAVDIYLVSSGQGTQSAAMQLAETLRDALPSLKLMTNYGGG-NFKKQFARADK 368

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
               +A++ G  E S   + +KDL KG++ +    +  +
Sbjct: 369 WGARIALVLGEDEVSAQQVVVKDLRKGEQETLAQADVAA 407


>gi|326476282|gb|EGE00292.1| histidyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 527

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 127/534 (23%), Positives = 216/534 (40%), Gaps = 73/534 (13%)

Query: 1   MGKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M  K K     + P+G  D    +  +R+ I  +I N+++ +G   ++TP+ E  + L  
Sbjct: 1   MAPKGKNSFTLKTPKGTKDWAGPDALLRDNIFSTITNVFKRHGGMALDTPVFELREILAG 60

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                  
Sbjct: 61  KYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRNIKRYHLAKVYRRDQP 117

Query: 119 KHGPGRFRQFIQCDVDNVG--SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
               GR R+F QCD D  G       AD+E+  ++ +  E +G  + +Y I +N+RKILD
Sbjct: 118 AMTKGRMREFYQCDFDIAGAQFDPMVADSEVLKIVTEVFEDLG-WKGNYTIKVNHRKILD 176

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ E  G+  D    +   +  A+DKLDK   + V+  + +              L    
Sbjct: 177 GLFEVCGVPQD----KIRTISSAVDKLDKLPWEDVRKEMVD-----------DKGLDGAV 221

Query: 237 IDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            D +  ++     + + E     E +    + + G +++ ++ E +   G   ++I    
Sbjct: 222 ADSIQKYVVRKGGRDLLESLLADEKLTANASAKAGLDDMALLLEYLEDFGVV-DKISFDM 280

Query: 294 TIVRGLEYYTGCVYEAILGF---------------------------PVMNEKQKPVVFG 326
           ++ RGL+YYTG +YE I                                       V  G
Sbjct: 281 SLARGLDYYTGVIYEVITEGSAPATATSAPEAQALQRSAKKDKKVDPDEDRSNDPSVGVG 340

Query: 327 SVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKSLESSTNNIK--EMGPVLITTM 383
           SV  GGRYD LV  F  +  +P  G S G+ R+    K+      N        V +  M
Sbjct: 341 SVAAGGRYDELVGMFSPKAQIPCVGVSFGVDRIFSITKARMQREKNANALRSSEVDVYVM 400

Query: 384 DHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
                     L +     + L  AGI+AE           Q K A+    P A+I G  E
Sbjct: 401 AFGGKGFTGLLKERMQICRSLWEAGIKAEFSYKVKPKLPAQFKAAEANGIPFAVILGEDE 460

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            + G +++K++         + +    +E     + + I  L + +K+ L++  
Sbjct: 461 LAAGKVRVKEM--------GLPDGHPEKEG----VLVDIDSLTTEIKQRLEKKA 502


>gi|187924517|ref|YP_001896159.1| histidyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|229558663|sp|B2SXS9|SYH_BURPP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|187715711|gb|ACD16935.1| histidyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 446

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 102/498 (20%), Positives = 199/498 (39%), Gaps = 64/498 (12%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK   +    +G  D   +E  +      +++++  +YG+  I TP++E++    + + +
Sbjct: 5   KKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIVEHTQLFKRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         G+ E
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLEINSL------GLAE 178

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +   H  + +      +  +D+  K  L    L + + +     +  + A         +
Sbjct: 179 ERAAHRVELIAHLEKHMDVLDEEAKRRLYTNPLRVLDTKNPAMQEVAQNA-------PKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +       L  ++K                         +    I+  +VRGL+
Sbjct: 232 IDFLGEESRAHFEGLQRILKAN-----------------------NIPFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NF 417
            LK  +       E     +  +     +  +  +  + LR  G+   +   +     +F
Sbjct: 321 LLKEEQLVP----EDEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSADGQTASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q+K AD      A++ G  E + G + +K L              +    +  Q  +P
Sbjct: 377 KSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD-----------TNANGGKNEQQNVP 425

Query: 478 ISELVSTVKKILQENKEE 495
             +L   +   +    E+
Sbjct: 426 AEDLTEFLINAMVATAED 443


>gi|73662437|ref|YP_301218.1| histidyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|83305879|sp|Q49Y69|SYH_STAS1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|72494952|dbj|BAE18273.1| histidyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 420

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 94/464 (20%), Positives = 179/464 (38%), Gaps = 50/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
             +PRG  D    E +    I   +  + E Y +  I TP+ E ++   + + D  D   
Sbjct: 2   INIPRGTQDILPNETKKWRFIEARLDELMEVYNYQEIRTPIFESTELFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   EN        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIENKMQGLPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGL 184
           RQF Q  V+ +G+     DAE+  M     ++ G+K     I  I +        E +  
Sbjct: 122 RQFTQFGVEAIGAENPGVDAEVLAMAMHIYQSFGLKHLKLVINSIGDIDSRHEYNEALVK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +  + +        D   +     +++L  +   D             +    +  FL
Sbjct: 182 HFEPVIGDF-----CSDCQSRLHTNPMRILDCKIDKDKE---------AVKTAPRITEFL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +   ++   ++ + +                                   +VRGL+YYT 
Sbjct: 228 NETSKQYYADVKQHLDDL-----------------------GVPYVEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++AL  
Sbjct: 265 TAFELMIDNPNYD-----GAITTLCGGGRYNGLLELLDGPHQTGIGFALSIERLLLALDE 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +   +     +  +    ++          LR  G++A+      +    Q+K A
Sbjct: 320 ENIELDTEHDFD---LFIVTMGEEADRYAVKLLNDLRRNGVKADKDY-LQRKVKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           DR N    I+ G  E     + +K++  G+  S ++    ++ +
Sbjct: 376 DRLNANYTIVIGEQELQENKINVKNMQTGESESVDLDKLVNYFK 419


>gi|260435174|ref|ZP_05789144.1| histidyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260413048|gb|EEX06344.1| histidyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 430

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 94/457 (20%), Positives = 177/457 (38%), Gaps = 53/457 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   + ++    +    R  +   GF  I TPLLE +D   + + +  D  
Sbjct: 3   QLQSLRGMVDLLPEALQRWQAVEAMAREHFHLSGFGEIRTPLLETTDLFCRGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S QD   +  +LR + TA + R   ++        + +  GP+FR E+   GR R
Sbjct: 63  GKEMYSFQDRGDRSCTLRPEGTASVVRAALQHGLLSQGAQKLWYAGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLH 185
           QF Q  V+ +G+    +D E+  +  D L ++G+      +      +        +   
Sbjct: 123 QFHQIGVEWLGAERARSDVEVIALAWDLLASLGVGGLQLELNSLGTAEDRQAYRNALVAW 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + +           D   +     +++L  + +   +           E+   +   L 
Sbjct: 183 LEQRSEALD-----PDSQTRLSTNPLRILDSKNKATQA---------LLEEAPTLADALC 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                               E        +   +   G      +++  +VRGL+YY+  
Sbjct: 229 --------------------EASRERFADVQRGLTALGIP---FRLNPRLVRGLDYYSHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS- 364
            +E            +     +V GGGRYDGL+ +  G   PA G+++G+ RL++ L++ 
Sbjct: 266 AFEIT--------SDQLGAQATVCGGGRYDGLIGQLGGSPTPAIGWALGMERLLLVLEAA 317

Query: 365 ----LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                +     +       +  ++    +        + LR +G+R E+   S   FG Q
Sbjct: 318 AQADAQGVAARLTAAAAPDVYLVNRGDAAERSALALARDLRASGLRVELD-ASGSAFGKQ 376

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            K ADR   P A++ G  E  RG +++K L +  E S
Sbjct: 377 FKRADRSGAPWALVIGEDEAERGEVRLKALNQQAEES 413


>gi|161524637|ref|YP_001579649.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350607|ref|YP_001946235.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221198080|ref|ZP_03571126.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221204361|ref|ZP_03577378.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221212770|ref|ZP_03585746.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|229558661|sp|A9AGZ7|SYH_BURM1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|160342066|gb|ABX15152.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334629|dbj|BAG43699.1| histidyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221166983|gb|EED99453.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221175218|gb|EEE07648.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221182012|gb|EEE14413.1| histidyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 446

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 103/503 (20%), Positives = 198/503 (39%), Gaps = 68/503 (13%)

Query: 1   MGKKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M ++ +   +L   +G  D   ++  +      +++++   YG+  I TP++E++    +
Sbjct: 1   MTEQKRKIEKLTGVKGMNDILPQDAGLWEFFESTVKSLLRAYGYQNIRTPIVEHTQLFTR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR
Sbjct: 61  GIGEVTDIVEKEMYSFTDALNGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         
Sbjct: 121 HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEER 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +                ++ 
Sbjct: 181 AAHRVELIKYLEQHVDALD----EDAKRRLYTNPLRVLDTKN---------PALQEIAQN 227

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL          L  L+                          +   KI+  +V
Sbjct: 228 APKLIDFLGDTSRAHFEGLQRLLLAN-----------------------NIPFKINPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI 
Sbjct: 265 RGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GS 413
           R++  LK    +     E   V +  +     +  +  +  + LR  G+         G+
Sbjct: 317 RILELLKEENLAP----EQEGVDVYVVHQGDAAREQAFIAAERLRDTGLDVIFHCSADGA 372

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVA 472
             +F +Q+K AD      A+I G  E + G + +K L   G                + A
Sbjct: 373 PASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGTG------------GDGEKNA 420

Query: 473 QITIPISELVSTVKKILQENKEE 495
           Q T+P+  L   +   +  + E+
Sbjct: 421 QQTVPVESLTEFLINAMVASAED 443


>gi|24643061|ref|NP_728180.1| Histidyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|7293481|gb|AAF48856.1| Histidyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|20976838|gb|AAM27494.1| GH22474p [Drosophila melanogaster]
 gi|220959048|gb|ACL92067.1| Aats-his-PA [synthetic construct]
 gi|220960228|gb|ACL92650.1| Aats-his-PA [synthetic construct]
          Length = 522

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 113/487 (23%), Positives = 214/487 (43%), Gaps = 39/487 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++
Sbjct: 54  NQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED 113

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     G
Sbjct: 114 ---SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTKG 169

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+         C+ +   +    +   DY I +N+R++LDG+ +  G
Sbjct: 170 RYREFYQCDFDIAGTYDPMLPDAECVKIVSEILDT-LDIGDYVIKLNHRQLLDGMFQACG 228

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  D        +  A+DKLDK     V+  + +              L     D +  +
Sbjct: 229 VPADS----FRTICSAVDKLDKSPWADVRKEMVDE-----------KGLDEAAADRIGEY 273

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +     + E     E +K      KG   +  + +     G +  R+    ++ RGL+
Sbjct: 274 VRLSGGAELVEQLLANEKLKAVPNAVKGLEGMKQLLKYCSIFGLDK-RVSFDLSLARGLD 332

Query: 301 YYTGCVYEAILGFP-------------VMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQN 345
           YYTG +YE +L                   +  +P   GSV GGGRYD L  +   +G+ 
Sbjct: 333 YYTGVIYEGVLKGESATVASPAKTSQQNGEQANEPATVGSVAGGGRYDNLVGMFDPRGKA 392

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           VP  G SIG+ R+   L++  +++        V +           +      +L  AG+
Sbjct: 393 VPCVGVSIGVERIFSVLEARAAASGLKLRTSDVEVYVASAHKGLHEQRLKVLNLLWDAGV 452

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +AE     +     QL++ +    PL ++ G  E ++G+++++++   +E + ++++  +
Sbjct: 453 KAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKLREVTTREETNVKLEDLAA 512

Query: 466 WREARVA 472
               R  
Sbjct: 513 EIRRRQQ 519


>gi|295133970|ref|YP_003584646.1| histidyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294981985|gb|ADF52450.1| histidyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 456

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 142/480 (29%), Positives = 222/480 (46%), Gaps = 52/480 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+  RN I DSI+  ++ +GF  IETP  E SD+L GK+  + D  
Sbjct: 4   KPSIPKGTRDFTPQEVAKRNYIFDSIKTEFKKFGFQAIETPSFENSDTLMGKYGEEGDRL 63

Query: 65  ---RPNKGVF-------SLQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCR 107
                N G F       +  D D   ++       LRYDLT P ARYV ++ + I FP +
Sbjct: 64  IFKILNSGDFLKKADEKAYADKDSLKLTPSISEKALRYDLTVPFARYVVQHQNEIDFPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GRFR+F QCD D VGS +   + E   +      A+ +      I
Sbjct: 124 RYQIQPVWRADRPQKGRFREFYQCDADVVGSDSLWQEVEFVQLYDSVFSALNLNG--VTI 181

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL G  E IG    DKL +  + L  +DK+ + G+  VK +L +          
Sbjct: 182 KINNRKILSGFAEVIG--EQDKLIDFTVALDKLDKIGEDGV--VKEMLSK---------- 227

Query: 228 KGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++ E I  +     L  D  + +  L  ++  +  G KG  EL  I   + +    
Sbjct: 228 ---GISEEAIAKIKPIFDLKGDFAEKIEALKAILSTSEVGLKGIEELEFIQNAILEMPLK 284

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +  + +  T+ RGL YYTG ++E      V          GS+GGGGRYD L   F  +N
Sbjct: 285 TANLDLDVTLARGLNYYTGAIFEVAAPDEVK--------MGSIGGGGRYDDLTGIFGLKN 336

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G+ R+ + L+ L      +     V +  ++               +R  G+
Sbjct: 337 MSGVGISFGLDRIYLVLEELNLFPEAVA--DDVKVLFVNFGEKEALYAFKGVNAIRAEGV 394

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AE+F  ++K    Q+ YA++RN P  I+ G  E   G   +K++  G++    +K   +
Sbjct: 395 NAEVFPDAAK-MKKQMNYANKRNIPFVILAGDEEMKAGEYTLKNMKTGEQDRLTLKELVA 453


>gi|308050456|ref|YP_003914022.1| histidyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307632646|gb|ADN76948.1| histidyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 425

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 108/476 (22%), Positives = 200/476 (42%), Gaps = 56/476 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   + +   ++  ++R +  ++G+  I TP++E +    + +
Sbjct: 1   MAKQ----IQAIRGMNDCLPADSQKWQQVERTLRELVASFGYQEIRTPIVEMTGLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ M+ A   + +GI           R  +   L
Sbjct: 117 PQKGRYRQFHQFGVEVYGLATADIDAEVLMLSAALWDQLGI-----------RDHVRLEL 165

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG-RTDNSGDFTKGANLTSEQID 238
             +G   +       +V+      +       + L     R  +S D    A L      
Sbjct: 166 NTLGNADERAAYRDALVVFLEQHKETLDEDSQRRLYTNPLRVLDSKDANVQALLAG--AP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +++ +L  + ++  + L EL++                              +++ +VRG
Sbjct: 224 VLMDYLGDESKQHFNTLCELLRAA-----------------------GIEFTVNTRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E +         +     G+V  GGRYD LV +  G++ PA GF++G+ RL
Sbjct: 261 LDYYNRTVFEWVT--------ESLGSQGTVLAGGRYDSLVGQLGGKDTPAVGFAMGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKN 416
           ++ L +L    N  +    V +        + +      Q LR   +G++     G   N
Sbjct: 313 VLLLDTLGKFDNLPR---GVDVYLCAMGDGAQAAALQLAQELRQSVSGLKVMTHCGGG-N 368

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           F  Q+K AD+    LA+I G  E  +G++ +K L  G++            +A V 
Sbjct: 369 FKKQMKRADKSGAELALILGEDELKQGLVTVKPLRGGEQRQLSRDALAMELKALVQ 424


>gi|303237392|ref|ZP_07323962.1| histidine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482779|gb|EFL45804.1| histidine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 454

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 137/480 (28%), Positives = 222/480 (46%), Gaps = 55/480 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D    E+  RN I D+I+++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGPDEMAKRNYIFDTIKSVYALYGFQQIETPAMETLQTLMGKYGDEGDKL 63

Query: 65  ---RPNKGVFSLQDDDGQWI--------------SLRYDLTAPLARYVAENFDTIVFPCR 107
                N G F     D + +               LRYDLT P ARYV  + + +  P +
Sbjct: 64  LFKILNSGDFLKNTKDEELLERNPLKLQTKVAEKGLRYDLTVPFARYVVMHREELQMPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI      I
Sbjct: 124 RYQIQPVWRADRPQKGRYREFYQCDADIVGSDSLLNEVELMQIIDTVFAKFGI---RVQI 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL GI E IG     + ++ + +  AIDKLDK GL+ V   L +          
Sbjct: 181 KINNRKILSGIAEVIG-----EADKIVQITTAIDKLDKIGLENVNAELAKES-------- 227

Query: 228 KGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               + ++ I+ +   + +    ++ +  + +++  +  G KG  E   I + ++K+   
Sbjct: 228 ----IPTDAIEKLQPIIQLSGTNDEKLDTIAKVLSNSEIGMKGVEESRYILDALKKTN-L 282

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
            N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F    
Sbjct: 283 KNEIELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGIFGMPG 333

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G  R+   L +L+        +    +  ++     ++    +    R A I
Sbjct: 334 LSGVGISFGADRIYDVLNTLDLYP--KSSVTGTQLLFINFGEKEMNYVLPFVAQARKANI 391

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           R E+F  S K    Q+ YA+ +N P  ++ G  E  +G + +KD+  G++     +   S
Sbjct: 392 RTEIFPDSVK-MKKQMAYANAKNIPFVVLAGDSEIEQGKVTLKDMESGEQTLVSSEELIS 450


>gi|333029871|ref|ZP_08457932.1| Histidyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740468|gb|EGJ70950.1| Histidyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 455

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 147/505 (29%), Positives = 221/505 (43%), Gaps = 78/505 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I D+IRN+Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPAEMAKRNYIFDTIRNVYHLYGFQQIETPAMENLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + + I F
Sbjct: 62  -KLLFKIQNSGDYFSKLTDEELLSRDAAKLASKFCEKGLRYDLTVPFARYVVMHRNEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++        I    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEIELMEIVDTVFTKFDI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILSGIAEVIGESDK-----IVDITVAIDKLDKVGLDNVNKELSEK------ 226

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ E I  +   +++     + +  L +++  +  G KG  E   I E +  +
Sbjct: 227 ------GISDEAIAKLQPIINLSGTNAEKLTVLKDVLASSEIGLKGVEESQFILEALS-T 279

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
               N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 280 LELKNEIELDLTLARGLNYYTGAIFEV---------KALDVEIGSITGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            ++V   G S G  R+   L  LE    +      +L           +        +R 
Sbjct: 331 LKDVSGVGISFGADRIYDVLNQLELYPKDALFGSQLLFINFGEKEA--AYCLKVLTKVRK 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE++         Q+ YA+        + G  E + G + +K++  G++ +     
Sbjct: 389 AGIRAEIYPDFGAKMKKQMTYANNNQVAFVAMVGENEMAEGKISLKNMETGEQKA----- 443

Query: 463 NESWREARVAQITIPISELVSTVKK 487
                        + I ELV+ +KK
Sbjct: 444 -------------VTIEELVNIIKK 455


>gi|325524775|gb|EGD02749.1| histidyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 446

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 103/503 (20%), Positives = 201/503 (39%), Gaps = 68/503 (13%)

Query: 1   MGKKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M ++ +   +L   +G  D   ++  +      +++++   YG+  I TP++E++    +
Sbjct: 1   MTEQKRKIEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR
Sbjct: 61  GIGEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         
Sbjct: 121 HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEER 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +                ++ 
Sbjct: 181 AAHRVELIKYLEQFVDVLD----EDAKRRLYTNPLRVLDTKN---------PALQEIAQN 227

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL  +       L  L+                          +   KI+  +V
Sbjct: 228 APKLIDFLGDESRAHFEGLQRLLLAN-----------------------NIPFKINPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI 
Sbjct: 265 RGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GS 413
           R++  LK  + +     E   V +  +     +  +  +  + LR  G+         G 
Sbjct: 317 RILELLKEEDLAP----EQEGVDVYVVHQGEAAREQAFIAAERLRDTGLDVIFHCSADGG 372

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVA 472
             +F +Q+K AD      A+I G  E + G + +K L   G+E  + +            
Sbjct: 373 PASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGAGEEGEKNV------------ 420

Query: 473 QITIPISELVSTVKKILQENKEE 495
           Q T+P+  L   +   +  + E+
Sbjct: 421 QQTVPVESLTEFLINAMVASAED 443


>gi|126654927|ref|ZP_01726461.1| histidyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126623662|gb|EAZ94366.1| histidyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 433

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 107/495 (21%), Positives = 187/495 (37%), Gaps = 75/495 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +   G  D   +EI     +      I     +  I  P+ E +    + + +  D  
Sbjct: 3   TIQTLPGTRDILPEEIGYWQYVESIATQILSRAMYYEIRPPIFEQTSLFERGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D   + ++LR + TA + R   +N         R +  GP+FR E+   GR 
Sbjct: 63  GKEMYTFSDRGDRSLTLRPEGTAGVVRAYLQNNLYAAGGVQRLWYCGPMFRYERPQAGRQ 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEK 181
           RQF Q  ++ +G++   AD E+  +  D L+ +G++     I      N+R+     L  
Sbjct: 123 RQFHQIGLELIGTADPRADVEVIALATDILKTLGLQSLKLDINSVGDRNDRQRYREALVN 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             L   ++L+         D  D+     +++L  + +              +E    ++
Sbjct: 183 YFLPYKEELD--------PDSQDRLQRNPLRILDSKDKRTKE---------INENAPSIL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L    +K   ++ +L+                               I+  +VRGL+Y
Sbjct: 226 EHLGDASKKHFDQVQQLLSDL-----------------------GIEYNINPCLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E I                +V GGGRYDGLV    G   PA G++IG+ RLI+ 
Sbjct: 263 YTHTAFEMI--------SDDLGAQATVCGGGRYDGLVEELGGNATPAVGWAIGMERLIIL 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           LK L+SS     +     I  +     +  +  +  Q LR  G+  E+ + S   FG Q 
Sbjct: 315 LKQLQSSPEMTPD-----IYLVSRGEAAEGQGLILAQKLRKEGLTVELDM-SGSAFGKQF 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K ADR      I+ G  E     +Q+K L   ++ +       +                
Sbjct: 369 KRADRSGAIACIVLGEEEAENKTMQLKWLQSKEQQAMTQAELFTK--------------- 413

Query: 482 VSTVKKILQENKEEI 496
           V  +K+ L  +K  +
Sbjct: 414 VGELKEQLDRHKRTM 428


>gi|253999424|ref|YP_003051487.1| histidyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253986103|gb|ACT50960.1| histidyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 418

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 100/460 (21%), Positives = 182/460 (39%), Gaps = 61/460 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  +GF D   ++  +  ++ D+ R +   YG+  I  P++E +D   + + +  D  
Sbjct: 4   KFQSIKGFYDILPEQTALWQKLEDTARQVLGQYGYRNIRMPIVEPTDLFIRSVGEHTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G  ++LR + TA   R V E+  T   P R + +GP+FR+E    GR 
Sbjct: 64  EKEMYSWVDALNGDKLTLRPEGTAGCVRAVVEHSLTYNGPQRLWYMGPMFRHENVQKGRQ 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEK 181
           RQF Q  V+  G +    DAE  M++A    A+G+     + +       R     +L  
Sbjct: 124 RQFHQIGVEAFGYAQPEVDAEQIMLLARLWRALGLTDVELQLNTIGDAAERAEYRQVLIA 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D L+E        D   +     +++L  +     +           E    ++
Sbjct: 184 YFEQHADLLDE--------DAKRRLHTNPLRILDSKNPRMQAMI---------EGAPRLL 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L  +       +  L+                          +    +++ +VRGL+Y
Sbjct: 227 DTLGGESRAHFDAVCALLNAA-----------------------NIPFVLNTRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +          +    G++ GGGRYD LV R  G   PA GF IG+ R+ + 
Sbjct: 264 YNRTVFEWVTT--------RLGSQGTIAGGGRYDTLVERLGGDATPACGFGIGLERVFLL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++          +        ++    +        + LR AGI   +      +F +Q+
Sbjct: 316 MQEYGIEAAQGLDG-----YLVNLGEQAERLAPQVAEQLRDAGISVALH-TGGGSFKSQM 369

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDL-AKGKELSREI 460
           K ADR     A+I G  E   G + +K +   G++   ++
Sbjct: 370 KKADRSGARFALILGDDEAQAGQITLKPMLGGGEQQRLDL 409


>gi|170754518|ref|YP_001782690.1| histidyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|229558648|sp|B1IMD8|SYH_CLOBK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|169119730|gb|ACA43566.1| histidyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 415

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 100/468 (21%), Positives = 189/468 (40%), Gaps = 62/468 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + +  RNI  ++G   I TP+ EY++   + + +  D 
Sbjct: 1   MSLQAPKGTKDLLPTESYKWQYLENKFRNIAADFGCREIRTPVFEYTELFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + T+P  R   E        P + Y   PV R E    GR
Sbjct: 61  VQKEMYTFEDKAGRSITLKPEGTSPAVRAFVEGRLFNETQPTKMYYFTPVMRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQ  Q  ++  G+   + DAE+  +     + +G++      +       RK  +  L+
Sbjct: 121 LRQHHQFGIEIFGAKDASVDAEVISIPVGIYKELGVEGVELNINSIGCPKCRKTYNEALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K      DKL              +F    +++L  + + D   +  K A +       +
Sbjct: 181 KYLSKNYDKL--------CSTCKTRFDKNPLRIL--DCKVDTCKEIVKDAPI-------I 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++  + +     L   +                            + K+   IVRGL+
Sbjct: 224 LDYICDECKDHFESLKSYLD-----------------------VLDIKYKVDPFIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+  V+E I+               ++  GGRYD L+    G ++PA GF +GI RL++
Sbjct: 261 YYSKTVFEFIIDD------------ITICAGGRYDYLIEEIGGPSMPAVGFGMGIERLLL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+        I E   V +   +    +  +     + LR   I+ E+     K+   Q
Sbjct: 309 TLQEK---AIEIPEEAYVDLYLGNMGDKAKLEVLKLAKELRDRHIKCEIDH-MGKSVKAQ 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +KYA+R     +++ G  E + G + +K +  GK++  +IK  ++  +
Sbjct: 365 MKYANRIGAKYSMVLGEEELNTGKVSLKRMEDGKQIEVDIKEIDTLIK 412


>gi|302668225|ref|XP_003025686.1| hypothetical protein TRV_00136 [Trichophyton verrucosum HKI 0517]
 gi|291189810|gb|EFE45075.1| hypothetical protein TRV_00136 [Trichophyton verrucosum HKI 0517]
          Length = 527

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 126/534 (23%), Positives = 217/534 (40%), Gaps = 73/534 (13%)

Query: 1   MGKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M  K K     + P+G  D    +  +R+ I  +I N+++ +G   ++TP+ E  + L  
Sbjct: 1   MAPKGKNSFTLKTPKGTKDWSGPDALLRDNIFSTITNVFKRHGGMALDTPVFELREILAG 60

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                  
Sbjct: 61  KYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRNIKRYHLAKVYRRDQP 117

Query: 119 KHGPGRFRQFIQCDVDNVG--SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
               GR R+F QCD D  G       AD+E+  ++ +  E +G  +  Y I +N+RKILD
Sbjct: 118 AMTKGRMREFYQCDFDIAGAKFDPMVADSEVLKIVTEVFEDLG-WKGKYTIKVNHRKILD 176

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ E  G+  D    +   +  A+DKLDK   + V+  + +              L    
Sbjct: 177 GLFEVCGVPQD----KIRTISSAVDKLDKLTWEDVRKEMVDE-----------KGLDGAV 221

Query: 237 IDIMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            D + +++     + + E     E +    + + G +++ ++ E +   G   ++I    
Sbjct: 222 ADSIQTYVVRKGGRDLLESLLTDEKLTANASAKAGLDDMALLLEYLEDFGVV-DKISFDM 280

Query: 294 TIVRGLEYYTGCVYEAILGF---------------------------PVMNEKQKPVVFG 326
           ++ RGL+YYTG +YE I                                       V  G
Sbjct: 281 SLARGLDYYTGLIYEVITEGSAPATATSAPEAQALQRSSKKDKKVDPDEDRSNDPSVGVG 340

Query: 327 SVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKSLESSTNNIK--EMGPVLITTM 383
           SV  GGRYD LV  F  +  +P  G S G+ R+    K+     +N        V +  M
Sbjct: 341 SVAAGGRYDDLVGMFSPKAQIPCVGVSFGVDRIFSITKARMQRESNANALRSSEVDVYVM 400

Query: 384 DHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
                     L +     + L  AGI+AE           Q K A+    P A+I G  E
Sbjct: 401 AFGGKGFTGLLKERMQICRSLWEAGIKAEFSYKVKPKLPAQFKAAETNGIPFAVILGEDE 460

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            + G +++K++         + +    +E     + + +  L + +K+ L++  
Sbjct: 461 LAAGQVRVKEM--------GLPDGHPEKEG----VLVDVDSLTTEIKQRLEKKA 502


>gi|239904666|ref|YP_002951404.1| histidyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|259511945|sp|C4XT36|SYH_DESMR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|239794529|dbj|BAH73518.1| histidyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 421

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 108/496 (21%), Positives = 195/496 (39%), Gaps = 76/496 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K++     GFAD    +  + + I ++ R ++  YG+  +  P+LE ++   + +
Sbjct: 1   MDKIQKIK-----GFADLFPPDSTVFSFIEETARQVFSRYGYKELRVPVLERTELFCRSI 55

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D  G+ ++LR + TA + R + E+        + +  GP+FR E+
Sbjct: 56  GEETDVVQKEMYTFPDRKGRSLTLRPEATAGVMRALVEDGRASEGLAKYFAYGPMFRYER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR RQF Q DV+ VGS     DAE+ +M+   L A+G+K     +     K    I 
Sbjct: 116 PQKGRMRQFHQIDVEAVGSPDALLDAEVLLMLDQYLRALGLKNLVIELNSLGCKACRPIF 175

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                   + L          D + +     +++L  + +     +FT  A         
Sbjct: 176 ---LDTLREFLKGMHKEQLCEDCMRRKLSNPLRVL--DCKVPQCKEFTADA-------PK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +   L  D       +  ++ G                             ++  +VRGL
Sbjct: 224 ITDHLCPDCADHFAAVRRVLDGAGLA-----------------------YTLNPRLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY    +E +                SV GGGRYDGLV    G +VP  GF+ G+ RL 
Sbjct: 261 DYYVRTTFEIV--------SGDIGSQSSVAGGGRYDGLVHSIGGPDVPGVGFACGMERLA 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + +          K         +  D+  L +  +  Q LR AG   E    ++K+  +
Sbjct: 313 LLIDK--------KAEPAPDFALVVLDAIGLERGLLLAQELRAAGFSGE-APYAAKSAKS 363

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           Q++ AD+      ++ G+ E + G + +K++  G                   Q T+   
Sbjct: 364 QMRAADKSGAAFCLVLGSDELAAGTVVVKNMRAG------------------GQETVSQD 405

Query: 480 ELVSTVKKILQENKEE 495
            L + ++  L   +E+
Sbjct: 406 ILPAHLRARLVAGQED 421


>gi|227552625|ref|ZP_03982674.1| histidine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257896962|ref|ZP_05676615.1| histidyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378682|ref|ZP_06624841.1| histidine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227178251|gb|EEI59223.1| histidine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833527|gb|EEV59948.1| histidyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292642722|gb|EFF60873.1| histidine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 430

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 100/478 (20%), Positives = 193/478 (40%), Gaps = 58/478 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + ++ R ++ +Y ++ I TP+ E+ + + + + D  D 
Sbjct: 1   MSFQRPKGTNDILPGESEKWQFVEETARLLFRDYQYNEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   E+         P +T+ +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGERHVTLRPEGTAPIVRSFVEHKLFGPEYAKPFKTFYMGPMFRYERPQK 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR RQF Q  V+  GS     D E  +M  D  + +GI +    I      + R+     
Sbjct: 121 GRLRQFHQIGVEAFGSENPATDVESMVMALDFFKQLGITQIRLVINSLGDKDTRQAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L    L  + +L+E        D   +     +++L  + + D                 
Sbjct: 181 LIDYLLPFEAELSE--------DSKRRLHENPLRVLDSKDKRDQKF---------VADAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +LS   +K    +  ++       +  + +                       VRG
Sbjct: 224 SILDYLSEPAQKHFDTVVSMLDALAVPYEIDSNM-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT  ++E +   P M          ++  GGRYD LV    G + P  GF++GI RL
Sbjct: 261 LDYYTHTIFEIMSDAPKM------GAQATICAGGRYDNLVEELGGPSTPGFGFAMGIERL 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +++ E       E+       +    ++  +     Q +R  G  A+     ++   
Sbjct: 315 LLTMEAEEVVIPAFNELDA---YVVALGDETNIEALKVVQAIRNFGFSADRDF-MNRKAK 370

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            Q K AD+ N  L ++ G  E +   + +K +A  KE S  ++      +    ++T+
Sbjct: 371 AQFKTADKANAKLVLVIGEDELASQTINVKAMASRKEKSFPLEEIYEHFDEVYDEMTL 428


>gi|90961829|ref|YP_535745.1| histidyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123086786|sp|Q1WTV0|SYH_LACS1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|90821023|gb|ABD99662.1| Histidyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 431

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 101/471 (21%), Positives = 176/471 (37%), Gaps = 65/471 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G AD    E      + +  R +++ Y ++ + TP+ E  +   +   +  D 
Sbjct: 1   MKYQRPKGTADILPSESAKWQYVEEKARELFKKYRYEEMRTPIFESFEVFSRTSGETSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P +TY +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAGVVRSFVENKLYGPEVQKPFKTYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKI 174
           GR R+F Q  V+  G    T D E+  M  D L++ G+           D     N R+ 
Sbjct: 121 GRLREFHQIGVEAFGVDNPTLDVEVMAMAVDLLKSFGLNSLRVAVNTLGDLETRNNYRQA 180

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   LE       D            D  ++     +++L  +   D             
Sbjct: 181 LIDYLEPFEAELSD------------DSKERLHKNPLRVLDSKDEKDKE---------IV 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L+ D +K    +  L+                               I S 
Sbjct: 220 ANAPSILDYLTEDAQKHFETVKSLLNDL-----------------------GIEYVIDSN 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   ++E +      N K   V       GG Y GLV +  G   P  GF +G
Sbjct: 257 MVRGLDYYNHTIFEIMSDSKAFNGKWTTV-----CAGGHYSGLVEQLGGPQTPGVGFGLG 311

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL++ L + E +      +    +  +     + +      Q LR  G  A+     +
Sbjct: 312 VERLLLILDAEEDTLPIENPLD---VYVVGIGDVTNAVTLKLVQNLRHQGFTADRDY-LN 367

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +    Q K A+R N    +  G  E       +K +  G E+S ++ + E+
Sbjct: 368 RKPKGQFKSANRLNARFTLTIGETELQEQEANLKFMKNGNEISVKLADVEN 418


>gi|218263553|ref|ZP_03477634.1| hypothetical protein PRABACTJOHN_03322 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222676|gb|EEC95326.1| hypothetical protein PRABACTJOHN_03322 [Parabacteroides johnsonii
           DSM 18315]
          Length = 451

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 139/483 (28%), Positives = 221/483 (45%), Gaps = 61/483 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I ++IR +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 3   KPSIPKGTRDFSPEEMAKRNYIFNTIREVYHLYGFQQIETPAMENLSTLMGKYGEEGD-- 60

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F + +          + +                LRYDLT P ARYV ++ + I F
Sbjct: 61  -KLLFKILNSGNCLSGITDEELLERNAVRFGVKACEKGLRYDLTVPFARYVVQHRNDITF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  +M +     GI    
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDGDVVGSDSLVNEVELIQIMDEVFHRFGI---R 176

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L         
Sbjct: 177 VCIKMNNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNEEL--------- 222

Query: 225 DFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
              +  +L+ + I  +   + +     + +  L + +  +    KG  E+  I + + K 
Sbjct: 223 ---RSKDLSEDAIARLQPIIMLKGTNREKLVVLKKELAASEIAMKGIAEMEFILDRIEKL 279

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
             N+  +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 280 ELNA-ELELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  LE    +  +   +L        ++          +R 
Sbjct: 330 MDGVSGVGISFGADRIFDVLNQLELYPVDSLKTTQLLFVNFGEKEEN--YLLPLISKVRA 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIR E++  ++K    Q+ YAD +  P   I G  E + G + +K++  G++    I+ 
Sbjct: 388 AGIRTELYPEAAK-MKKQMGYADTKKIPFVAIVGENEINEGKINLKNMLTGEQSLVTIEE 446

Query: 463 NES 465
              
Sbjct: 447 LIE 449


>gi|241889466|ref|ZP_04776766.1| histidyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863862|gb|EER68244.1| histidyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 426

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 103/469 (21%), Positives = 197/469 (42%), Gaps = 53/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D   +E      I   +R I +N+ ++ I TP+ E ++   + + D  D 
Sbjct: 1   MVISMPRGTQDILPEESIKWQYIEGKLREISKNFCYEEIRTPMFESTELFSRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++ QD   + ++LR + TA   R   EN      + P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFQDKGNRSLTLRPEGTAGTVRSYIENKLFAKTIQPQKLYYVGPMFRYERKQKG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF+Q  V+ +G  +   DAE+  +  +     GI+     I    N +      E +
Sbjct: 121 RYRQFVQYGVEVIGEESPKIDAEVISLAYNIYRMFGIENIKVSINSLGNPEERQAYNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + ++NE        D  ++     +++L  + + D   +         +    ++ 
Sbjct: 181 VKHFEPRINEF-----CEDCNNRLYKNPMRIL--DCKVDAGHELI-------KSAPKLLD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + ++   E+ + +       +  + L                       VRGL+YY
Sbjct: 227 YLGEESKQYFAEVLKHLDALGVKYEIDHNL-----------------------VRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS-RFKGQNVPATGFSIGISRLIVA 361
           T   +E ++  P        V   ++ GGGRY+GL+      ++    GF++ I RL++A
Sbjct: 264 THTAFEIMIDNPE-------VELKTLCGGGRYNGLIKLLDGPEDKKGIGFALSIERLLLA 316

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+S       +     + +  +    ++ +     T  LR AG   +      K    Q+
Sbjct: 317 LESENI---ELPIDDTIDVFVVAMGEEASNAGVKLTNDLRLAGYSVQNDYF-DKKMKAQM 372

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           K ADR N   +II G  E   G L +KD+   ++   +++N   + + +
Sbjct: 373 KIADRYNAKYSIIIGQSELESGTLVVKDMKSFEQEIIKLENIVDYLQEK 421


>gi|296158991|ref|ZP_06841819.1| histidyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295890866|gb|EFG70656.1| histidyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 446

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 97/498 (19%), Positives = 193/498 (38%), Gaps = 64/498 (12%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK   +    +G  D   +E  +      +++++  +YG+  I TP++E++    + + +
Sbjct: 5   KKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIIEHTQLFKRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I             
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLEINSLGLAHERAAHR 184

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +   +K  + L      +   +     +++L  +                ++    +
Sbjct: 185 VELIAHLEKHMDVLD----EEAKRRLYTNPLRVLDTKNPAMQE---------VAQNAPKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +       L  ++K                         +    I+  +VRGL+
Sbjct: 232 IDFLGEESRAHFDGLQRILKAN-----------------------NIPFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NF 417
            LK  +       E     +  +     +  +  +  + LR  G+   +   +     +F
Sbjct: 321 LLKEEQLVP----EDEGCDVYVVHQGDAAREEAFIIAERLRDTGLDVILHCSADGQTASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q+K AD      A++ G  E + G + +K L              +    +  Q  +P
Sbjct: 377 KSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD-----------TNANGGKNEQHNVP 425

Query: 478 ISELVSTVKKILQENKEE 495
             +L   +   +    E+
Sbjct: 426 AEDLTEFLINAMVATAED 443


>gi|212541929|ref|XP_002151119.1| histidyl-tRNA synthetase, mitochondrial precursor [Penicillium
           marneffei ATCC 18224]
 gi|210066026|gb|EEA20119.1| histidyl-tRNA synthetase, mitochondrial precursor [Penicillium
           marneffei ATCC 18224]
          Length = 615

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 125/541 (23%), Positives = 215/541 (39%), Gaps = 79/541 (14%)

Query: 1   MGKKT----KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           M K          + P+G  D    +  IR+RI  +I N++  +G   ++TP+ E  + L
Sbjct: 72  MAKDKESKVTFNLKTPKGTRDWSGADTLIRDRIFSTITNVFRRHGGTALDTPVFELREIL 131

Query: 57  GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
                ++   +K ++ LQD  G+  SLRYDLT P AR++A N D  +   + Y I  V+R
Sbjct: 132 AGKYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPD--IRSIKRYHIAKVYR 186

Query: 117 NEKH----GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            ++     G  R       D+          DAE+  ++ +  E +G  +  + I IN+R
Sbjct: 187 RDQPAVAKGRMREFYQCDFDIAGANFDPMVPDAEVLKVINEVFEDLG-WQGKFTIKINHR 245

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+LDG+ E  G+  D    +   +  A+DKLDK     V+  + E              L
Sbjct: 246 KVLDGMFEVCGVPQD----KIRPISSAVDKLDKAPWADVRKEMVEE-----------KGL 290

Query: 233 TSEQIDIMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
            +   D +  ++S    K ++      E +    A ++G  E+ ++ + +   G   + I
Sbjct: 291 DAAVADKIEKYVSKKGRKDLYAELLKDEELMANAAAKQGIEEMGLLMDYLEAFGVL-DTI 349

Query: 290 KISSTIVRGLEYYTGCVYEAIL----------------------------GFPVMNEKQK 321
               ++ RGL+YYTG +YE +                             G         
Sbjct: 350 SFDLSLARGLDYYTGVIYEVVTEGSAPTAATSAPEAKNLQRSAKKSKAPKGEDDDRSNDP 409

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVL 379
            +  GS+  GGRYD LV  F  +  +P  G S G+ R+    K+ +E    +      V 
Sbjct: 410 TIGVGSIAAGGRYDNLVGMFSPKAQIPCVGISFGVDRIFSVTKARMEREKASEVRNNEVD 469

Query: 380 ITTMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
           +  M          L +     + L  AG++AE           Q K A+    P  +I 
Sbjct: 470 VYVMAFGGKGFTGMLKERMEICKTLWAAGVKAEFSYKLKPKLPQQFKAAETSGIPFGVIL 529

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           G  E + G ++IK++                       + + I  LVS +K  + +  + 
Sbjct: 530 GEDELAAGQVKIKEM------------GLPEGHPEKEGVLVDIKNLVSEIKLRIDKKNQG 577

Query: 496 I 496
           +
Sbjct: 578 V 578


>gi|310790989|gb|EFQ26522.1| histidyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 553

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 123/525 (23%), Positives = 210/525 (40%), Gaps = 62/525 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K+K   + P+G  D   K++ IR +I   ++ +++ +G   ++TP+ E  + L    
Sbjct: 1   MAPKSKFELKTPKGTKDWFGKDMLIREKIFSQLKGVFQKHGGMELDTPVFELKEILSGKY 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K ++ L D  G+  SLRYDLT P AR++A N D                    
Sbjct: 61  GED---SKLIYDLADQGGELTSLRYDLTVPFARWLAMNKDIQSVKRYHISKVYRRDQPAM 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+F QCD D  G+          + +   +        +Y I +N+RKILDGI E
Sbjct: 118 NKGRMREFYQCDFDIAGTYDSMLPDAEIIRIIVEVFEGLGWNGNYTIKLNHRKILDGIFE 177

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  D    +   +  A+DKLDK               D   + T+   L  E  D +
Sbjct: 178 VCGVPED----KIRTISSAVDKLDKLPW-----------VDARKEMTEEKGLDGEVADKI 222

Query: 241 VSFLSIDLEKSMH---ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++    ++ +    +  + +    + + G  +L ++   +   G   +R+    ++ R
Sbjct: 223 GEWVVQKGKQDLLRKLQRDDKLSANASMKAGMADLELLFNYLEAFG-ALDRVSFDLSLAR 281

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKP--------------------------VVFGSVGGG 331
           GL+YYTG +YE +                                      V  GSV  G
Sbjct: 282 GLDYYTGVIYEVVTEGSAPAAAPNADDKTVKSKKKSKSKDKDDEDRSDDPSVGVGSVAAG 341

Query: 332 GRYDGLVSRFK-GQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDHDSDS 389
           GRYD LV  F     +P  G S GI R+    K+ +++ +   +    V + ++   +  
Sbjct: 342 GRYDNLVGMFSGKTQIPCVGVSFGIERIFSITKARMQAESEAPQSTVDVFVMSLGSKAGL 401

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           + +       L  AGI+AE           Q K A+    P AII G  E  +G+++IK+
Sbjct: 402 VKERLEVCSKLWDAGIKAEFLYKVKPKLPPQFKAAESNATPFAIILGDDEVQKGVVRIKE 461

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           L                   +     + ++ LV  V+K L   +E
Sbjct: 462 L------------GLPEGHPQKDGELVDMASLVPEVQKRLSRKRE 494


>gi|148381006|ref|YP_001255547.1| histidyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153931156|ref|YP_001385377.1| histidyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153937842|ref|YP_001388784.1| histidyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166227960|sp|A7FY04|SYH_CLOB1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227961|sp|A5I6D6|SYH_CLOBH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|148290490|emb|CAL84618.1| histidyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152927200|gb|ABS32700.1| histidyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152933756|gb|ABS39255.1| histidine--tRNA ligase [Clostridium botulinum A str. Hall]
 gi|322807356|emb|CBZ04930.1| histidyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 415

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 99/468 (21%), Positives = 189/468 (40%), Gaps = 62/468 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + +  RNI  ++G   I TP+ EY++   + + +  D 
Sbjct: 1   MSLQAPKGTKDLLPTESYKWQYLENKFRNIAADFGCREIRTPVFEYTELFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + T+P  R   E        P + Y   PV R E    GR
Sbjct: 61  VQKEMYTFEDKAGRSITLKPEGTSPAVRAFVEGRLFNETQPTKMYYFTPVMRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQ  Q  ++  G+   + DAE+  +     + +G++      +       RK  +  L+
Sbjct: 121 LRQHHQFGIEIFGAKDASVDAEVISIPVGIYKELGVEGVELNINSIGCPKCRKTYNEALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K      DKL              +F    +++L  + + D   +  K A +       +
Sbjct: 181 KYLSKNYDKL--------CSTCKTRFDKNPLRIL--DCKVDTCKEIVKDAPI-------I 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++  + +     L   +                            + K+   IVRGL+
Sbjct: 224 LDYICDECKDHFEALKSYLD-----------------------VLDIKYKVDPFIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+  V+E I+               ++  GGRYD L+    G ++PA GF +GI RL++
Sbjct: 261 YYSKTVFEFIIDD------------ITICAGGRYDYLIEEIGGPSMPAVGFGMGIERLLL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+        I E   V +   +    +  +     + LR   I+ E+     K+   Q
Sbjct: 309 TLQEK---AIEIPEEAYVDLYLGNMGDKAKLEVLKLAKELRDRHIKCEIDH-MGKSVKAQ 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +KYA+R     +++ G  E + G + +K +  G+++  +IK  ++  +
Sbjct: 365 MKYANRIGAKYSMVLGEEELNTGKVSLKRMEDGQQIEVDIKEIDTLIK 412


>gi|91775972|ref|YP_545728.1| histidyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123380447|sp|Q1H0V0|SYH_METFK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|91709959|gb|ABE49887.1| histidyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 419

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 99/466 (21%), Positives = 186/466 (39%), Gaps = 62/466 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  +GF D    +  +  RI DS R +   YG+  I  P++E ++   + + +  D  
Sbjct: 4   KFQSIKGFYDILPADTALWQRIEDSARQVLSQYGYRNIRLPIVEPTELFIRGVGEHTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S +D  +G  ++LR + TA   R V E+  T   P R + +GP+FR+E    GR 
Sbjct: 64  EKEMYSWEDKLNGDRLTLRPEGTAGCVRAVVEHSLTYNGPQRLWYMGPMFRHENVQKGRQ 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILE 180
           RQF Q   +  G +    DAE   M+A     +G+        +     + R     +L 
Sbjct: 124 RQFHQIGAEAFGYTGPDVDAEQISMLARLWRELGVANEVELQLNTIGDASERAQYRQVLI 183

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +     +  L++        D   +     +++L  +     +           E    +
Sbjct: 184 RYFEQHESLLDD--------DAKRRLYANPLRILDSKNPAMQTMI---------EAAPKL 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L                    GE+       ++  + + G    +  +++ +VRGL+
Sbjct: 227 LDSL--------------------GEESRAHFDGVTRQLDQLG---IKWTLNTRLVRGLD 263

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G++ GGGRYD LV    G+  PA GF IG+ R+ +
Sbjct: 264 YYNRTVFEWVTN--------KLGSQGTIAGGGRYDSLVQSLGGKETPACGFGIGLERVFL 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            ++        I+      +  ++    +        + LR +G+   +  G   +F +Q
Sbjct: 316 LMRE-----CGIEAFHSPDVYLVNVGDAANKAALPIAEALRDSGLSVSLHAGGG-SFKSQ 369

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNES 465
           +K AD+     A+I G  E +   + +K L   G++    +     
Sbjct: 370 MKKADQSGAQYALILGDDEIAANEVCLKPLRENGEQRRMSLSQAIE 415


>gi|323464278|gb|ADX76431.1| histidyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 423

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 100/464 (21%), Positives = 180/464 (38%), Gaps = 48/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
             +PRG  D   +E      I + +  + E Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IHIPRGTQDILPEETTKWRYIENQLHKLMEVYNYQEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   EN        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIENKMQGLPNQPVKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K+    I        D        +
Sbjct: 122 RQFNQFGVEAIGAENPSMDAEVLAMVMHIYQSFGLKKLKLVINSVG----DAESRVDYQN 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  + +I     D   +     +++L  +         T            +  FL+
Sbjct: 178 ALREHFQPVIHNYCKDCQQRIKTNPMRILDCKVDRHQPEIQT---------APSITDFLN 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              +     +   +                              ++   +VRGL+YYT  
Sbjct: 229 DYSKDYFEAVKSHLD-----------------------RLGVPYEVDPKLVRGLDYYTHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +     M+ +       ++ GGGRY+GL+    G +    GF++ I RL++AL+  
Sbjct: 266 AFELM-----MDNEAYDGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEE 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                   +M  + +        +          LR AGI  +     S+    Q+K AD
Sbjct: 321 GI---EFPQMQHIDLFVATMGEKADDFAVTLLNRLRHAGISVDKDY-LSRKLKGQMKQAD 376

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           R N    I+ G  E   G + +K +A G+  + + +  ES+   
Sbjct: 377 RLNATYTIVIGDQELEAGEVAVKHMATGESQTMKFEEIESYIHG 420


>gi|325298974|ref|YP_004258891.1| Histidyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318527|gb|ADY36418.1| Histidyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 454

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 150/504 (29%), Positives = 220/504 (43%), Gaps = 79/504 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I  +IR ++  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPCIPKGTRDFSPEEMAKRNYIFSTIREVFRLYGFQQIETPAMENLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGLTDEELLSRNAAKLACKFCEKGLRYDLTVPFARYVVMHRDDIAF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + ++I PV+R ++   GR+R+F QCD D VGS +   + E+  M+       GI+   
Sbjct: 121 PFKRFQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELVQMLDTVFCKFGIRVA- 179

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++   +  AIDKLDK GL+ V   L         
Sbjct: 180 --IKINNRKILSGIAEIIG-----EADKITDITVAIDKLDKIGLENVNAELA-------- 224

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  +  E I  +     LS   ++ +  L + +  +  G KG  E   I   +   
Sbjct: 225 ----SKGIPQESIAKLQPIILLSGTNQEKLATLKQTLALSETGMKGVEESEFILNTIAGL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G  S  +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 GIRS-EVELDLTLARGLNYYTGAIFEV---------KALDVQIGSISGGGRYDNLTGIFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              V   G S G  R+   L  L+    +      VL           +        +R 
Sbjct: 331 LPGVSGVGISFGADRIYDVLNQLDLYPKDASASTQVLFVNFGSAET--AYVLPILAKVRE 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE+F  +SK    Q+ YA+ +  P   I G  E   G L +K++  G++       
Sbjct: 389 AGIRAEIFPDASK-MKKQMSYANAKAIPFVAIAGENEMQEGKLTLKNMTTGEQ------- 440

Query: 463 NESWREARVAQITIPISELVSTVK 486
                        +   EL++TVK
Sbjct: 441 -----------HLVTPDELIATVK 453


>gi|239637564|ref|ZP_04678536.1| histidyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596782|gb|EEQ79307.1| histidyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 420

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 99/462 (21%), Positives = 185/462 (40%), Gaps = 50/462 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++      I + +  + E Y +  I TP+ E ++   + + D  D   
Sbjct: 2   IKIPRGTQDILPEDSIKWRYIENKLDQLMEIYNYQEIRTPIFESTELFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + ++LR + TA + R   E+        P + Y   P+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSLTLRPEGTAGVVRSYIEHKMQGNPNQPVKLYYNSPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGL 184
           RQF Q  V+ +GS   + DAE+  M+    ++ G+K     I  I +        E +  
Sbjct: 122 RQFNQFGVEAIGSENPSIDAEVLAMVMHIYQSFGLKHLKLVINSIGDSDSRKEYNEALVK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +  +++        D   +     +++L  +   D             +    +  FL
Sbjct: 182 HFEPVIDDF-----CQDCQSRLHTNPMRILDCKVDRDKE---------AVKNAPRITDFL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + D +    ++ + +                                   +VRGL+YYT 
Sbjct: 228 NEDSKAYYEQVKKHLDDLE-----------------------IPYVEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++A   
Sbjct: 265 TAFELMMDNPNYD-----GAITTLCGGGRYNGLLELLDGPSQTGIGFALSIERLLLA-LE 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E    +IK    + I TM   +D           LR  G++A+     ++    Q+K A
Sbjct: 319 EEGIELDIKNDFDLFIVTMGEQADR--YAVKLLNELRKNGVKADKDY-LNRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           DR N    I+ G  E     + IK++  G+  S ++     +
Sbjct: 376 DRLNANYTIVIGDQELENNQIDIKNMETGESESIQLDQIVDY 417


>gi|329768512|ref|ZP_08260000.1| histidyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836662|gb|EGF86319.1| histidyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 426

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 102/469 (21%), Positives = 196/469 (41%), Gaps = 53/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E      I   +R I +N+ ++ I TP+ E ++   + + D  D 
Sbjct: 1   MVISMPRGTQDILPDESVKWQYIEGKLREISKNFCYEEIRTPMFESTELFSRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++  D   + ++LR + TA   R   EN      + P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFMDKGNRSLTLRPEGTAGTVRSYIENKLFAKTIQPQKLYYVGPMFRYERKQKG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF+Q  V+ +G  +   DAE+  +  +     GI+     I    N +      E +
Sbjct: 121 RYRQFVQYGVEVIGEESPKIDAEVISLAYNIYRMFGIENIKVSINSLGNPEERQAYNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + ++NE        D  ++     +++L  + + D   +         +    ++ 
Sbjct: 181 VKHFEPRINEF-----CEDCNNRLYKNPMRIL--DCKVDAEHELI-------KSAPRLLE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + ++   E+ + +       +  + L                       VRGL+YY
Sbjct: 227 YLGEESKQYFAEVLKHLDALGVKYEIDHNL-----------------------VRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS-RFKGQNVPATGFSIGISRLIVA 361
           T   +E ++  P        V   ++ GGGRY+GL+      ++    GF++ I RL++A
Sbjct: 264 THTAFEIMIDNPE-------VELKTLCGGGRYNGLIKLLDGPEDKKGIGFALSIERLLLA 316

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+S       +     + +  +    ++ +     T  LR AG   +      K    Q+
Sbjct: 317 LESENI---ELPIDDTIDVFVVAMGEEASNAGVKLTNDLRLAGYSVQNDYF-DKKMKAQM 372

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           K ADR N   +II G  E   G L +KD+   ++ + +++N   + + +
Sbjct: 373 KIADRYNAKYSIIIGQSELESGTLVVKDMKSFEQETIKLENIVDYLQEK 421


>gi|222153889|ref|YP_002563066.1| histidyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254782349|sp|B9DW81|SYH_STRU0 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|222114702|emb|CAR43804.1| histidyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 425

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 101/463 (21%), Positives = 179/463 (38%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      + +  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGEAAKWQYLENVARETFKKYHYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSFVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+   +D E   M +   E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGSANPASDVETIAMASHLFETLGIKDMTLHLNSLGNPSSRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + E+L    + D   +     +++L  +   D          +  E    ++ 
Sbjct: 181 LIDYLTPMREQL----SKDSQRRLDENPLRVLDSKEVEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + E++                          +    I + +VRGL+YY
Sbjct: 228 YLDEESKAHFEAVQEMLTTL-----------------------NIPFVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E +      +         ++  GGRYDGLVS F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFMAKVEGSD--------LTICAGGRYDGLVSYFDGPETPGFGFGLGLERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +    + M    +        + SK     Q +R  G  AE      +    Q K
Sbjct: 317 EKQGITLPIEEPMD---VYLAVLGEAANSKALALVQAIRKQGFTAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AD  N    I  G  E   G + IK+    +E+   ++   S
Sbjct: 373 SADSFNAKTIITLGESEVETGKVIIKNNQTREEMEVSLEEITS 415


>gi|313890391|ref|ZP_07824022.1| histidine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121234|gb|EFR44342.1| histidine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 433

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 100/461 (21%), Positives = 174/461 (37%), Gaps = 52/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D   +E      +    R  +E Y +  I TP+ E+ + + + + D  D 
Sbjct: 9   MKLQKPKGTQDILPEEAAKWQYVEAVARETFEKYNYGEIRTPMFEHYEVISRSVGDTTDI 68

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 69  VTKEMYDFHDKGDRHITLRPEGTAPVVRSFVENKLFAPEVQKPVKLYYIGSMFRYERPQA 128

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E   M     E +GIK    HI             + 
Sbjct: 129 GRLREFHQIGVECFGSANPATDVETIAMANHLFETLGIKDITLHINSLGSPASRAAYRQA 188

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + E+L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 189 LIDYLTPMREQL----SKDSQRRLDENPLRVLDSKEKEDK---------VAVENAPSILD 235

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + +++                               I + +VRGL+YY
Sbjct: 236 YLDEESQAHFEAVKDMLADLE-----------------------IPYVIDTNMVRGLDYY 272

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E +                ++  GGRYDGLVS F G   P  GF +G+ RL++ L
Sbjct: 273 NHTIFEFMATVDKSE--------LTICAGGRYDGLVSYFDGPETPGFGFGLGLERLLLIL 324

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    +        + SK     Q LR  G +AE      +    Q K
Sbjct: 325 EKQGITLPVAPEMD---VYIAVLGESANSKALALVQSLRRQGFKAERDY-LGRKIKAQFK 380

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD     + +  G  E   G + +K+     E+    +  
Sbjct: 381 SADNFKAKVIMTLGESEVEAGKVTLKNNQSRHEIEARFEEI 421


>gi|194892525|ref|XP_001977678.1| GG19169 [Drosophila erecta]
 gi|190649327|gb|EDV46605.1| GG19169 [Drosophila erecta]
          Length = 521

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 114/487 (23%), Positives = 214/487 (43%), Gaps = 39/487 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++
Sbjct: 54  NQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED 113

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     G
Sbjct: 114 ---SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTKG 169

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+         C+ +   +    +   DY I +N+R++LDG+ +  G
Sbjct: 170 RYREFYQCDFDIAGTYDPMLPDAECVKIVSEILD-SLDIGDYVIKLNHRQLLDGMFQACG 228

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  D        +  A+DKLDK     V+  + E              L     D +  +
Sbjct: 229 VPTDS----FRTICSAVDKLDKSPWADVRKEMVEE-----------KGLDEAAADRIGEY 273

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +     + E     E +K      KG   +  + +     G +  R+    ++ RGL+
Sbjct: 274 VRLSGGAELVEQLLGDEKLKAVPNAVKGLEGMKQLLKYCSIFGLDK-RVSFDLSLARGLD 332

Query: 301 YYTGCVYEAILGFP-------------VMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQN 345
           YYTG +YE +L                   +  +P   GSV GGGRYD L  +   +G+ 
Sbjct: 333 YYTGVIYEGVLKGESASVASPAKTSQQNGEQANEPATVGSVAGGGRYDNLVGMFDPRGKA 392

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           VP  G SIG+ R+   L++  +++        V +           +      +L  AG+
Sbjct: 393 VPCVGVSIGVERIFSVLEARAAASGLKLRTSDVEVYVASAHKGLHEQRLKVLNLLWDAGV 452

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +AE     +     QL++ +    PL ++ G  E ++G+++++++   +E + ++++  +
Sbjct: 453 KAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKLREVTTREETNVKLEDLAA 512

Query: 466 WREARVA 472
               R  
Sbjct: 513 EIRRRQQ 519


>gi|330683923|gb|EGG95691.1| histidine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 420

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 95/461 (20%), Positives = 179/461 (38%), Gaps = 48/461 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++      I + +  + E Y +  I TP+ E ++   + + D  D   
Sbjct: 2   IKIPRGTQDILPEDSIKWRYIENKLDQLMEIYNYQEIRTPIFESTELFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + ++LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSLTLRPEGTASVVRSYIEHKMQGNPNQPVKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+ +GS   + DAE+  M+    ++ G+K     I             K  + 
Sbjct: 122 RQFNQFGVEAIGSENPSIDAEILAMVMHIYQSFGLKHLKLVINSIGDSDSRKEYNKALV- 180

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              K  E +I     D   +     +++L  +   D             +    +  FL+
Sbjct: 181 ---KHFEPVIDNFCQDCQSRLHTNPMRILDCKVDRDKE---------AVKNAPRITDFLN 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D +    ++ + +                                   +VRGL+YYT  
Sbjct: 229 EDSKAYYEQVKQHLDDLE-----------------------IPYVEDPNLVRGLDYYTHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++   +L
Sbjct: 266 AFELMMDNPNYD-----GAITTLCGGGRYNGLLELLDGPSQTGIGFALSIERLLL---AL 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           E     +       +  +     +          LR  G++A+     ++    Q+K AD
Sbjct: 318 EEEGIELDIKNDFDLFIVTMGEKADRYAVKLLNELRKNGVKADKDY-LNRKIKGQMKQAD 376

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           R N    I+ G  E     + IK++  G+  S ++     +
Sbjct: 377 RLNANYTIVIGDQELENNQIDIKNMETGESESIQLDQIVDY 417


>gi|170723485|ref|YP_001751173.1| histidyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229558706|sp|B1JDV7|SYH_PSEPW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|169761488|gb|ACA74804.1| histidyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 429

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 104/487 (21%), Positives = 185/487 (37%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + + YG+  I TP++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQSPLWRYFEGTVAGLLDTYGYSQIRTPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNE 118
            +  D   K +++ +D +G  ++LR + TA   R V E+  T      + + IG +FR+E
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLEHGITGNGQVQKLWYIGQMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           +   GR+RQF Q  V+         DAE+ M+       +G                   
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIMLTWRLWGLLGIQDAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +       D    
Sbjct: 177 RYRDALVEFLSARLEQLDE------------DSQRRLKSNPLRILDSK-------DPNTQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  D       L   +                              
Sbjct: 218 AVLVG--APKLEDYLDEDSRVHFEGLKARLDAA-----------------------GIPF 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I++ +VRGL+YY+  V+E +          K    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINTKLVRGLDYYSKTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQMGGKPTTGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++GI RLI+ L++L     +I     V +      ++        ++ LR    G+R 
Sbjct: 305 GFAMGIERLILLLETLGKVPASINRQIDVYLCAFGEQAEL--AGLRLSESLRDRLPGLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
            +  G   +F +Q K AD+     A+I G  E ++  + +K L  +G++ +         
Sbjct: 363 AVNAGGG-SFKSQFKKADKSGALFALILGDDELAKQEIGLKPLRGQGEQQNIAWDALAEH 421

Query: 467 REARVAQ 473
            E  +AQ
Sbjct: 422 LETAIAQ 428


>gi|315186817|gb|EFU20575.1| histidyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 437

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 126/456 (27%), Positives = 219/456 (48%), Gaps = 42/456 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++  + +GF D        +  I+ ++  ++ ++G+ PI+TP+LEY++  LGK   +   
Sbjct: 2   IQPRVLKGFRDFLPDLEARKKSIVRTLEEVFTSFGYLPIDTPVLEYAEILLGKSGGET-- 59

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K V+   D  G+ ++LR+DLT P AR++A++   +  P R Y I  VFR E    GR+
Sbjct: 60  -EKQVYRFTDHGGRDVALRFDLTVPFARFMAQHMAELYLPFRRYHIAKVFRGENTQRGRY 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F+QCD D VG  + +AD E+ ++M   L ++G+    + I +++R +L   L ++ + 
Sbjct: 119 REFMQCDFDIVGPDSTSADLEVLLIMQKALASLGM--ERFTIHLSHRGVLQDFLARLEVS 176

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL- 244
                   + VLR +DK+ K G + V+  L +                 E+   ++ F+ 
Sbjct: 177 E------PVEVLRTVDKIRKIGREKVRETLAQLS-------------DEERAGRILDFIA 217

Query: 245 -SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              + E+++  + E V           E+  +   +  + +      I  +I RGL+YYT
Sbjct: 218 PGSEPEEALSRMEEGVGADNPHLARLKEIWAVIGELGLARF----FTIDPSITRGLDYYT 273

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+E  L              GSV  GGRYD LV  +  Q++   G SIG+ RL+ A++
Sbjct: 274 GVVFETFLSD--------LPDIGSVCSGGRYDNLVGLYSAQSMSGVGASIGLDRLMAAMQ 325

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
            L            VL+  M  +   L+ Y      LR  G+R E++   ++  G Q  Y
Sbjct: 326 ELGMLEAIPTMAPEVLVVCM--EERFLAHYHGVAAALRARGVRTEVYP-QARKLGQQFSY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           A+++  P A+I G  E + G + +KDLA   +    
Sbjct: 383 AEKKGIPFALIMGEDEIAAGAMALKDLAARTQRVVR 418


>gi|317484491|ref|ZP_07943401.1| histidyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924267|gb|EFV45443.1| histidyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 416

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 99/454 (21%), Positives = 173/454 (38%), Gaps = 51/454 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPNKGVF 71
           +GFAD  + +      +    R  +  YGF  + TP+LE ++   + +  + D   K ++
Sbjct: 9   KGFADLFSPDSDAFTHMEAVARETFSRYGFTELRTPILERTELFCRGIGTETDVVQKEMY 68

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           +  D  G+ ++LR + TA + R   E+  +     + + IGP+FR E+   GR RQF Q 
Sbjct: 69  TFPDRKGRSLTLRPEATAGVMRAYIESGRSGDAVTKLFTIGPMFRYERPQKGRMRQFHQI 128

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
           + + +G S   ADAE+  M    LEA+G+K     +                      L+
Sbjct: 129 NCECLGPSEPYADAELVTMAMRFLEALGLKDLSLQLNSLGCPTCR---PAYRETLRKWLS 185

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E        D   +     +++L  +  +                   ++     D    
Sbjct: 186 ELDESALCEDCRRRMVTNPLRVLDCKVPSCREHTAET---------PKILDHNCPDCAAH 236

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
              +  L+                               I+  +VRGL+YYT   +E + 
Sbjct: 237 FETVRRLLDA-----------------------EKVPYVINHRLVRGLDYYTRTTFEIV- 272

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                    +    G+V GGGRYDGLV +  G NV   GF+ G+ RL + L         
Sbjct: 273 -------SDQIGAQGTVAGGGRYDGLVEQLGGPNVSGLGFACGMERLALLL------PQP 319

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                     T+     +       TQ LR AG R EM   SS++  + ++ A +     
Sbjct: 320 EAGADRPDFFTVVLTDVARDAAYALTQALRDAGFRGEMGF-SSRSIKSAMRQAGKSGARF 378

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            ++ G  E +   + +K++  G++ S    +  +
Sbjct: 379 CLLIGEDELAAQTVMLKNMDSGEQSSVAFADVVA 412


>gi|226306422|ref|YP_002766382.1| histidyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259511955|sp|C0ZZ58|SYH_RHOE4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226185539|dbj|BAH33643.1| histidyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 423

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 101/494 (20%), Positives = 184/494 (37%), Gaps = 81/494 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K +      P+G  D    +      + D +       G+  IE P+ E +    + +
Sbjct: 1   MSKAS--TFSAPKGIPDYVPPQSAEFVAVRDGLTRAARLAGYGHIELPIFEDTGLFARGV 58

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 59  GESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHSLDRGQLPVKVSYAGPFFRYE 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +      ++G            D      
Sbjct: 119 RPQAGRYRQLQQVGVEAIGIDDPALDAEVIAIADAGFRSLGLDGFRLEITSLGDDTCRPQ 178

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R++L   L  + L  D +    +  LR +D                    +  + T GA
Sbjct: 179 YRELLQEFLFALPLDEDTRRRAEINPLRVLDDK----------------RPDVREMTAGA 222

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L  + +                            E        +   +   G       
Sbjct: 223 PLMLDHLS---------------------------ESCKAHFDEVLAHLDALGVP---YV 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YYT   +E +                 +GGGGRYDGL+ +  GQ +   G
Sbjct: 253 VNPRMVRGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMEQLGGQPLSGIG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F IG+ R ++AL++      ++     V +  +   +++ +        LR  GIR ++ 
Sbjct: 305 FGIGVDRTVLALEAEGK---SVAPPARVDVFCVPMGAEAKAALVKIAHQLRANGIRVDLA 361

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            G ++     +K ADR    +A++ G  E   G++ +K LA G++ +  +          
Sbjct: 362 YG-NRGVKGSMKAADRSGAAVALVLGERELEEGVVVVKQLATGEQETVPLD--------- 411

Query: 471 VAQITIPISELVST 484
             Q+   + +LV  
Sbjct: 412 --QVVDKLGDLVEH 423


>gi|313205851|ref|YP_004045028.1| histidyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445167|gb|ADQ81522.1| histidyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022754|gb|EFT35778.1| histidyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336712|gb|ADZ12986.1| Histidyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 452

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 137/479 (28%), Positives = 217/479 (45%), Gaps = 54/479 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED- 64
           ++  L +G  D    E+  R  I+  ++  +E +GF P+ETP  E   +L GK+  + D 
Sbjct: 1   MKPSLAKGTRDFSALEVYRRRYIISVLQKNFELFGFSPLETPSFENLSTLTGKYGEEGDR 60

Query: 65  ----RPNKGVF-------SLQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFPC 106
                 N G +        L + D + ++       LRYDLT P AR+VA N   +VFP 
Sbjct: 61  LIFKILNSGDYLSKISEQDLIEKDHKKLTPKVSDKALRYDLTVPFARFVAMNHGQLVFPY 120

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           + Y+I PV+R ++   GRFR+F QCD D VGS +   + E+  +   +   + +   D  
Sbjct: 121 KRYQIQPVWRADRPQKGRFREFYQCDADVVGSESLWQEVELVQLYLKSFAELNL---DVK 177

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I INNRKIL G+    G+       + +    A+DKLDK G +GV   L           
Sbjct: 178 IHINNRKILSGLATYAGIAE-----QLVDFTVALDKLDKIGKEGVIEELK---------- 222

Query: 227 TKGANLTSEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
               N+ SE I+ +        D  + +  L E       G KG  E+  + +     G 
Sbjct: 223 --SKNIPSEAIEKLEFLFHPLEDNLEYLSALKERFSDIEIGLKGVEEVEFVIKQCLALGV 280

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
           +   ++   T+ RGL+YYTG ++E          K   V  GS+GGGGRYD L   F  +
Sbjct: 281 SPEVLQFDITLARGLDYYTGAIFEV---------KSNEVQLGSIGGGGRYDNLTEVFGVK 331

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           N+P  G S G+ R+ + ++ L      + +    L                  Q LRT G
Sbjct: 332 NIPGIGISFGLDRIYLVMEELNRFPQEVSQNVQYLFANYGEQEAF--YAMDIIQQLRTKG 389

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           + AE++  ++K    Q  YA+++  P  +  G  E     + IK+L  G++ S  +++ 
Sbjct: 390 VSAELYPEAAK-LKKQFTYAEKKGIPYIVFVGEEEIKNKQVSIKNLETGEQNSLTLEDF 447


>gi|300770263|ref|ZP_07080142.1| histidine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762739|gb|EFK59556.1| histidine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 472

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 140/500 (28%), Positives = 223/500 (44%), Gaps = 59/500 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  L +G  D    E+  RN I +++++++  YG+  I+TP  E   +L GK+  + D  
Sbjct: 5   KPSLAKGTRDFSPAEMEKRNYIFNTLKSVFRKYGYQEIQTPSFENLQTLTGKYGDEGD-- 62

Query: 67  NKGVFSLQDDDG----------------------QWISLRYDLTAPLARYVAENFDTIVF 104
            K +F + +                            +LRYDLT P ARYV      I  
Sbjct: 63  -KLIFKILNSGDYLSKAPDALLAEKASNSLIPHLSEKALRYDLTVPFARYVVMRQHEISL 121

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + ++I PV+R ++   GR+R+F QCDVD VGS +   +AE  ++  + L A+G++  D
Sbjct: 122 PFKRFQIQPVWRADRPQRGRYREFYQCDVDVVGSESLLNEAEFILIYHEALRALGLR--D 179

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
           + I INNRKIL GI E IG            +  AIDKLDK GL GV   L E       
Sbjct: 180 FAIKINNRKILSGIAEIIGKPE-----LIFDMTVAIDKLDKIGLDGVNKELLE------- 227

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG- 283
              +G       I   +  L       + +L  ++  +  G +G  EL  +   + +   
Sbjct: 228 ---RGFTEADLAILRPIILLEGSTVSKIEQLRSVLAKSETGLRGVAELEEVFAYLNQLDV 284

Query: 284 ---YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                +  +++  T+ RGL YYTGC++E          K   V  GS+GGGGRYD L   
Sbjct: 285 SGEVYNKYVELDITLARGLNYYTGCIFEV---------KTNEVSMGSIGGGGRYDDLTGM 335

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           F  + +   G S G  R+   L+ L+    +  +   +LI   D   ++ +        L
Sbjct: 336 FGLKGLTGVGVSFGADRIYDVLEELDLYPKHESDNTRLLIVNFDKSIEAFT--LPLLNRL 393

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R AGI  E++  + K    Q+ YAD +  P  ++ G  E + G L +K++  G++     
Sbjct: 394 RQAGIAVELYPQAVK-LKKQMSYADDKRIPYVLLIGEEEVNTGKLSLKNMKSGEQQKLSE 452

Query: 461 KNNESWREARVAQITIPISE 480
           +        + A   I   +
Sbjct: 453 QEITVLLSKQRADSAIRTDQ 472


>gi|290475998|ref|YP_003468894.1| histidine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289175327|emb|CBJ82130.1| histidine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 425

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 99/471 (21%), Positives = 179/471 (38%), Gaps = 71/471 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K         RG  DC   E  I  R+  +++ +   YGF  I TP++E +    + +
Sbjct: 1   MAKN----IPAIRGMNDCLPAETAIWQRVESTVKRVLAGYGFSEIRTPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   ++        R + IGP+FR E+
Sbjct: 57  GEVTDVIEKEMYTFDDRNGESLALRPENTAGCVRAGIQHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAEM +M A     +G                   N
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAEMILMTARWWRELGIAEHVTLELNSIGSLDARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   LE+     D+            D   +     +++L  +             
Sbjct: 177 YREALVAFLEQHKETLDE------------DCQRRMYTNPLRVLDSKN---------PEI 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            +       +  +L  + ++    +  ++                            +  
Sbjct: 216 QVLLNDAPALFDYLDTESKEHFDGVCRILDSA-----------------------GIKYH 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G++ PA G
Sbjct: 253 LNQRLVRGLDYYNRTVFEWVTSA--------LGAQGTVCAGGRYDGLVEQLGGKSTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ R+++ ++ +      + ++    +        S        + +R     +R  
Sbjct: 305 FAMGMERMVLLVQEVN--PEFVADLAVADVYLSSFGEGSQQAALNLAEQIRDELPELRLM 362

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
              G   NF  QL  AD+    +A+I G  E   G + +KDL  G++ +  
Sbjct: 363 TNHGGG-NFKKQLGRADKHGAKVALILGEDEIRAGNITVKDLRNGEQETLS 412


>gi|154309553|ref|XP_001554110.1| hypothetical protein BC1G_07247 [Botryotinia fuckeliana B05.10]
 gi|150852270|gb|EDN27462.1| hypothetical protein BC1G_07247 [Botryotinia fuckeliana B05.10]
          Length = 534

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 105/499 (21%), Positives = 186/499 (37%), Gaps = 47/499 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K   + P+G  D   K++ IR++I  +I   ++ +G   I+TP+ E  D L    
Sbjct: 1   MAKGPKFELKTPKGTKDWQGKDMVIRDKIFSTITEAFKRHGAVTIDTPVFELKDILAGKY 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K ++ L D  G+  SLRYDLT P AR++A N                      
Sbjct: 61  GED---SKLIYDLADQGGEICSLRYDLTVPFARWLAMNGSVQSIKRYHIAKVYRRDQPAM 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+F QCD D  G           + +A  +      +  Y I +N+RKILDGI E
Sbjct: 118 TKGRMREFYQCDFDIAGVYDPMLPDAEIIRVATEVFEGLGWKGRYTIKLNHRKILDGIFE 177

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  D    +   +  A+DKLDK   + V+  + E              L  +  D +
Sbjct: 178 VCGVPED----KIRTISSAVDKLDKLPWEDVRKEMTEE-----------KGLAEDVADRI 222

Query: 241 VSFLSIDLEKSMH---ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++    +K +    +  E +    + + G  ++ ++   +       N +    ++ R
Sbjct: 223 GEYVVQKGQKDLLSKLQADEKLMANASMKAGLEDMDLLFGYLEAFKCLEN-VSFDLSLAR 281

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYTG +YE +                      +   +    + ++   +     ++ 
Sbjct: 282 GLDYYTGIIYEVVTEGSAPLVSTSAATAAPPKSSKKPKKVADADEDRSSDPSVGVGSVAA 341

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
                            +    +           L +       L  AGI+AE       
Sbjct: 342 G-----------GRYDNLVDCFVMAFGGKGFTGLLKERMSICSTLWEAGIKAEFLYKVKP 390

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
              NQ K A+    P ++I G  E ++G ++IK            +N           + 
Sbjct: 391 KLPNQFKAAEVNGVPFSVILGEDEIAQGKVKIK------------ENGLRDGHPEKDGVM 438

Query: 476 IPISELVSTVKKILQENKE 494
           + +  LVS VK+ L+   +
Sbjct: 439 VNLDALVSEVKQRLKRKAD 457


>gi|88858479|ref|ZP_01133121.1| histidine tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88820096|gb|EAR29909.1| histidine tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 424

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 103/482 (21%), Positives = 190/482 (39%), Gaps = 73/482 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   + ++  ++   +R+   ++G+  I  P++E +D   + +
Sbjct: 1   MAKQ----IQAIRGMNDCLPGDTQVWQKVETILRDTVASFGYQEIRFPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAVCVRAGNENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  +++ G +    DAE+ ++ A   +A G+ +                 
Sbjct: 117 PQKGRYRQFHQFGLESFGVATADMDAEVILLTARLWQAFGVSKYVRLELNSLGSNQAREE 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+   H D+            D   +     +++L  +             
Sbjct: 177 YRNALVAYLEQHIEHLDE------------DSKRRMYSNPLRVLDSKN---------PDV 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +   L  +  +    L E +       +   +L                  
Sbjct: 216 QAILGNAPKLSQHLDAESAEHFANLCERLDAAGVEYQVNEKL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +         +     G+V  GGRYDGLV +  G+  PA G
Sbjct: 258 -----VRGLDYYNRTVFEWVT--------ESLGAQGTVCAGGRYDGLVEQLGGKATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L+ L+             +        +  +  +    LR    GIR  
Sbjct: 305 FAMGMERLVLLLQELD---CVGDIRRTSDVYLASLGDKASIQAPVIAAQLREQVPGIRI- 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWR 467
           M      NF  QLK AD+ +  +A+I G  E ++G++ +K L +   + + E+    +  
Sbjct: 361 MVHAGGGNFKKQLKRADKSDAVVALILGDDELAQGLVTVKYLREHKDQQTLELSQVATLL 420

Query: 468 EA 469
             
Sbjct: 421 AD 422


>gi|83647149|ref|YP_435584.1| histidyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|83635192|gb|ABC31159.1| histidyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 424

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 103/465 (22%), Positives = 194/465 (41%), Gaps = 60/465 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           R +  RG  D   ++  I   + D+ R ++E YG + I  P++E +D   + + +  D  
Sbjct: 3   RIQAIRGMNDVLPEQTPIWRYLEDTARCLFEQYGIEEIRMPIVEQTDLFKRSIGEVTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ +D +G  ++LR + TA   R   E+        R +  GP+FR+E+   GR+R
Sbjct: 63  EKEMYTFEDRNGDSLTLRPEGTAGCVRAGEEHGLLFNQTRRLWYSGPMFRHERPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q  V+  G +    DAE+ +M A   + +G+  +     +       R      L  
Sbjct: 123 QFHQIGVECFGFNGPDIDAELIIMTARLWKKLGLSDHVQLHINSIGSAEARAEYRRALVN 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                +D+L+E        D   +     +++L  +     + +  +GA L         
Sbjct: 183 YLGQYEDQLDE--------DSRRRLSTNPLRILDSKDA--KTQEILQGAPL-------FN 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +  +    L   +                               ++  +VRGL+Y
Sbjct: 226 DFLDAESAQHFAGLRAFLDKAGL-----------------------SYTVNPKLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E I               G+V  GGRYDGLV++  G+  P  GF++G+ RL++ 
Sbjct: 263 YGKTVFEWIT--------DSLGAQGTVCAGGRYDGLVAQLGGKGTPGVGFAMGVERLVLM 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKNFGN 419
           L++L  +  ++++     I  +   ++  +      + LR     +R  M  G   +F  
Sbjct: 315 LETLNLTPASLQDRADFFIAALGEGAE--AYAFEVAEQLRDLQQNVRVVMNCGGG-SFKA 371

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK-ELSREIKNN 463
           Q+K AD+ +   A++ G  E S+  + IK L   + + +  ++  
Sbjct: 372 QMKKADKSSAAFALLLGESEVSQREVTIKPLRTDQAQKTLALEEF 416


>gi|114332132|ref|YP_748354.1| histidyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313187|sp|Q0AE43|SYH_NITEC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|114309146|gb|ABI60389.1| histidyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 421

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 105/472 (22%), Positives = 179/472 (37%), Gaps = 67/472 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
               RG  D    E  +     D+IR     YG+  + TP++E +D   + + +  D   
Sbjct: 5   IRAVRGMNDILPDESDLWGFFEDTIRTWLAAYGYRNLRTPIVEQTDLFVRSIGEVTDIVE 64

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++S  D  +G+ ++LR + TA   R V E+      P R Y  GP+FR+E+   GR+R
Sbjct: 65  KEMYSFIDQLNGENLTLRPEGTASCVRAVIEHNLLYSGPQRLYYSGPMFRHERPQKGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILDGI 178
           QF Q  V+ +G      DAE+ +M A     +GI                +  R  L   
Sbjct: 125 QFHQVGVEALGFVGPDIDAELIIMCARLWRLLGIPDVRLEISTLGSIESRLIYRARLISY 184

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           LEK     D+            D   +     +++L  +           G     E   
Sbjct: 185 LEKFYDELDE------------DARRRLKTNPLRILDSKN---------PGMREILEGAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   L  D       L  +++      +  + L                       VRG
Sbjct: 224 HLFDDLDEDSLIHFDALQRILRNQGISFEINHRL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E +          K    G++  GGRYDGL+++  G+  PA GF++GI R+
Sbjct: 261 LDYYNRTVFEWVT--------DKLGAQGTICAGGRYDGLIAQIGGKPAPACGFAMGIERI 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +  +   + +    +      +  +     +        + LR AG +  +      +F 
Sbjct: 313 LSLISETDVAA---EIHTVPDVYVVHQGDIAAGFSWKVAESLRDAGFKV-VLHSGGGSFK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREA 469
            Q+K AD      A I G  E + G + IK L +  +++  ++     + E 
Sbjct: 369 AQMKKADASGARFAAIIGDDEAATGQVSIKSLREAVEQVKIDLTKVAVFLEN 420


>gi|227890854|ref|ZP_04008659.1| histidyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867263|gb|EEJ74684.1| histidyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 431

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 101/471 (21%), Positives = 177/471 (37%), Gaps = 65/471 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G AD    E      + +  R +++ Y ++ + TP+ E  +   +   +  D 
Sbjct: 1   MKYQRPKGTADILPSESAKWQYVEEKARELFKKYRYEEMRTPIFESFEVFSRTSGETSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P +TY +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAGVVRSFVENKLYGPEVQKPFKTYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKI 174
           GR R+F Q  V+  G    T D E+  M  D L++ G+           D     N R+ 
Sbjct: 121 GRLREFHQIGVEAFGVDNPTLDVEVMAMAVDLLKSFGLNSLRVAVNTLGDLETRNNYRQA 180

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   LE       D            D  ++     +++L  +   D             
Sbjct: 181 LIDYLEPFEAELSD------------DSKERLHKNPLRVLDSKDEKDKE---------IV 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L+ D +K    +  L+                               I S 
Sbjct: 220 ANAPSILDYLTEDAQKHFETVKSLLNDL-----------------------GIEYVIDSN 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   ++E +      N K   V       GG Y GLV +  G   P  GF +G
Sbjct: 257 MVRGLDYYNHTIFEIMSDSKAFNGKWTTV-----CAGGHYSGLVEQLGGPQTPGVGFGLG 311

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL++ L + E +      +    +  +     + +      Q LR  G  A+     +
Sbjct: 312 VERLLLILDAEEDALPIENPLD---VYVVGIGDVTNAVTLKLVQNLRHQGFTADRDY-LN 367

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +    Q K A+R N    +  G  E       +K +  G E+S ++++ E+
Sbjct: 368 RKPKGQFKSANRLNARFTLTIGETELQEQEANLKFMENGNEISVKLEDVEN 418


>gi|171321334|ref|ZP_02910293.1| histidyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171093391|gb|EDT38579.1| histidyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 446

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 105/503 (20%), Positives = 203/503 (40%), Gaps = 68/503 (13%)

Query: 1   MGKKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M ++ +   +L   +G  D   ++  +      +++++   YG+  I TP++E++    +
Sbjct: 1   MTEQKRKIEKLAGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR
Sbjct: 61  GIGEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         
Sbjct: 121 HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEER 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +                ++ 
Sbjct: 181 AAHRVELIKYLEQFADVLD----EDAKRRLYTNPLRVLDTKN---------PALQEIAQN 227

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL  +       L  L+                          +   KI+  +V
Sbjct: 228 APKLIDFLGDESRAHFEGLQRLLLAN-----------------------NIPFKINPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI 
Sbjct: 265 RGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GS 413
           R++  LK  + +     E   V +  +     +  +  +  + LR  G+         G+
Sbjct: 317 RILELLKEEDLAP----EQEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSADGA 372

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVA 472
           S +F +Q+K AD      A+I G  E + G + +K L   G+E  +             A
Sbjct: 373 SASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGAGEEGEKN------------A 420

Query: 473 QITIPISELVSTVKKILQENKEE 495
           Q T+P+  L   +   +  + E+
Sbjct: 421 QQTVPVENLTEFLINAMVASAED 443


>gi|167836396|ref|ZP_02463279.1| histidyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 446

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 99/498 (19%), Positives = 189/498 (37%), Gaps = 64/498 (12%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + +
Sbjct: 5   KRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ ++LR + TA + R   E+      P R + +GP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFVDSLNGEHLTLRPENTAAVVRAAIEHNMLYDGPKRLWYLGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I             
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLAGIKLEINSLGLAEERAAHR 184

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +   ++  E L      D   +     +++L  +                 +    +
Sbjct: 185 VELIKYLEQHAESLD----DDAQRRLYTNPLRVLDTKN---------PALQEIVQNAPKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL          L  L+K                              I+  +VRGL+
Sbjct: 232 IDFLGDASRAHFEGLQRLLKANNL-----------------------PFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++G+ R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGVERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNF 417
            LK          E   V +  +     +  +  +  + LR  G+   +     G+  +F
Sbjct: 321 LLKEENLMP----EQEGVDVYVVHQGDAAREQAFIAAERLRDTGLDVILHCSADGAGASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q+K AD      A+I G  E + G   +K L                   +  Q ++P
Sbjct: 377 KSQMKRADASGAAFAVIFGEDEVANGAASVKPLR-----------GAGADGEKNVQQSVP 425

Query: 478 ISELVSTVKKILQENKEE 495
           +  L   +   +    E+
Sbjct: 426 VESLTEFLINAMVATAED 443


>gi|229491999|ref|ZP_04385816.1| histidyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229321131|gb|EEN86935.1| histidyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 423

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 102/494 (20%), Positives = 184/494 (37%), Gaps = 81/494 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K +      P+G  D    +      + D +       G+  IE P+ E +    + +
Sbjct: 1   MSKAS--TFSAPKGIPDYVPPQSAEFVAVRDGLTRAARLAGYGHIELPIFEDTGLFARGV 58

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 59  GESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHSLDRGQLPVKVSYAGPFFRYE 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +      ++G            D      
Sbjct: 119 RPQAGRYRQLQQVGVEAIGIDDPALDAEVIAIADAGFRSLGLDGFRLEITSLGDDTCRPQ 178

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R++L   L  + L  D +    +  LR +D                    +  + T GA
Sbjct: 179 YRELLQEFLFALPLDEDTRRRAEINPLRVLDDK----------------RPDVREMTAGA 222

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L  + +                            E        +   +   G       
Sbjct: 223 PLMLDHLS---------------------------ESCKAHFDEVLAHLDALGVP---YV 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YYT   +E +                 +GGGGRYDGL+ +  GQ +   G
Sbjct: 253 VNPRMVRGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMEQLGGQPLSGIG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F IG+ R ++AL++      ++     V +  +   +++ +        LR  GIR ++ 
Sbjct: 305 FGIGVDRTVLALEAEGK---SVAPPARVDVFCVPMGAEAKAALVKIAHQLRANGIRVDLA 361

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            G ++     +K ADR    +A++ G  E   G++ +K LA G++ +  +          
Sbjct: 362 YG-NRGVKGSMKAADRSGAAIALVLGERELEEGVVVVKQLATGEQEAVALD--------- 411

Query: 471 VAQITIPISELVST 484
             Q+   + ELV  
Sbjct: 412 --QVVDKLGELVEH 423


>gi|260913153|ref|ZP_05919635.1| histidine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260632740|gb|EEX50909.1| histidine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 423

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 104/489 (21%), Positives = 201/489 (41%), Gaps = 72/489 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   +   +R++ +NYG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCSPTESPLWQWVEGKVRSVLQNYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNQEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+ ++ A   + +GI  +   + +N+   L+   
Sbjct: 116 PQKGRYRQFHQAGVEVFGIPNPEIDAELIILTARLWKELGIFEH-VTLQLNSIGSLEA-- 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            K       +  ++ + L + ++ ++     +++L  + +                +   
Sbjct: 173 RKNYRSALVEFLQQHVDLLSDEEKERLEKNPLRILDTKNQA---------LQEVLNEAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  D  +   +L  L+                            + +++  +VRGL
Sbjct: 224 LLDYLDDDSREHFAQLCSLLDAI-----------------------GIQYEVNPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G +    GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHSTTGVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKNF 417
           + ++ +            V I  +     +        + LR+  + +R  M   S  NF
Sbjct: 313 LLVQEVNKDILLPSA---VDIYVVYQGEGTTLAAFRLAETLRSELSHLRV-MTHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q K AD+    LA++ G  E     + +K L  G E                 Q TI 
Sbjct: 369 KKQFKRADKSGATLALVIGESEVQNQQVVVKHLLNGAE-----------------QQTIA 411

Query: 478 ISELVSTVK 486
           +SE+V+ +K
Sbjct: 412 LSEIVAYIK 420


>gi|271967380|ref|YP_003341576.1| histidine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270510555|gb|ACZ88833.1| Histidine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 421

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 105/495 (21%), Positives = 190/495 (38%), Gaps = 84/495 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + +++       G+  IETP+ E +    + + +  D 
Sbjct: 1   MTLQAPKGTFDWLPPRSEQALAVREALTAPVRRAGYGYIETPVFEDTALFVRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            +K +++ +D  G+ ++LR + TA + R V ++       P + +  G  FR E+   GR
Sbjct: 61  VSKEMYTFEDKGGRSLTLRPEGTASVVRSVLQHGLHNGQLPVKLWYSGSQFRYERAQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++ AD    +G            D       R  L 
Sbjct: 121 YRHFWQIGAEALGAEDPALDAELIVLAADGYAGLGLTGVRLLLNTLGDKECRPGYRTALQ 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L    +    +  LR +D                           GA L    
Sbjct: 181 DFLRALDLDEPTRQRIEINPLRVLDDK----------------RPEVQAQLAGAPL---- 220

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +V  L    +    E+  L+                                   +V
Sbjct: 221 ---VVDHLCEACKAYHEEVRSLLTAAGVA-----------------------YTDDPRLV 254

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 255 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMLGGPALPSVGWALGVD 306

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++A+++   +     E   V +  +    ++  +  +    LR AG+ A+M  G  K 
Sbjct: 307 RTLLAMEAEGLAGAETAE-SRVQVYGVPLGEEARRRMFLLMTELRRAGLDADMSFG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
               +K ADR     A+I G  + + G  Q+KDLA G + +                  +
Sbjct: 365 VKGAMKGADRSGASYAVILGERDIAAGSAQVKDLASGDQTA------------------V 406

Query: 477 PISELVSTVKKILQE 491
           P++E+V+T+K+ L++
Sbjct: 407 PLAEIVTTLKERLKK 421


>gi|237709640|ref|ZP_04540121.1| histidyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237725216|ref|ZP_04555697.1| histidyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265754272|ref|ZP_06089461.1| histidyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|229436482|gb|EEO46559.1| histidyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229456276|gb|EEO61997.1| histidyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263234981|gb|EEZ20536.1| histidyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 454

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 141/481 (29%), Positives = 216/481 (44%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR+++  +G+  IETP +E   +L GK+  + D  
Sbjct: 4   KPGIPKGTRDFSPVEMAKRNYIFNTIRDVFHLFGYQQIETPSMENLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+           + +S              LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFNGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEISF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS++   + E+  M+       G+    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELVQMIDRVFGKFGV---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG     + ++ + +  AIDKLDK GL+ V   L         
Sbjct: 178 VSIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLENVNAELA-------- 224

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  +  E ID +     LS   E+ +  L  ++  +  G KG  E   I + V   
Sbjct: 225 ----SKGIPQEAIDKLQPIILLSGSNEEKLETLKTVLAASETGMKGVEESEFILKTVSTL 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G  S  +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 281 GVKS-EVELDLTLARGLNYYTGAIFEV---------KALDVQIGSISGGGRYDNLTGVFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +   G S G  R+   L  L+           +L           +        +R 
Sbjct: 331 MDGMSGVGISFGADRIFDVLNQLDLYPKEAVNGTELLFVNFGDKEA--AYCLPILAKVRE 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            G+RAE++  ++K    Q+ YA+ +  P   I G  E + G L +K++  G++       
Sbjct: 389 TGVRAEIYPDAAK-MKKQMGYANDKQIPFVAIVGENEMNEGKLTLKNMTTGEQSLVTPDE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|300710220|ref|YP_003736034.1| histidyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123903|gb|ADJ14242.1| histidyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 432

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 125/460 (27%), Positives = 200/460 (43%), Gaps = 37/460 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  +GF D   +E+R R  ++D +      YGF  I TP LE ++   +   +E     
Sbjct: 2   YERIKGFRDFYPEEMRSRRAVIDGLEEAARRYGFREIGTPALERTEMYVEKSGEE--ITD 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D  G+ +++  +LT  +AR V      +  P + +   P +R E+   GRFR+F
Sbjct: 60  ELYHFTDQGGREVAMTPELTPTVARMVVAKQQELSKPIKWFSTRPFWRYEQVQQGRFREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q +VD  GSS   ADAE+    AD L  +G+   D+   +++R IL G+L+ +G   D 
Sbjct: 120 YQTNVDVFGSSEPEADAEVLAYCADALTGLGLTGEDFEFRVSHRDILGGLLDAVGDEVDT 179

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +       +RA+DK +       K+  GE            A LT  Q +   S LS D 
Sbjct: 180 RE-----AIRAVDKRE-------KIEDGEYYG-----LLTDAGLTGSQAEQFDSLLSTDD 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              + E      GT   +     L  +       G       IS    RGL+YYTG V+E
Sbjct: 223 LGELVE----FAGTDRVQSAVENLENVLAAAEDFGARE-HCTISLETARGLDYYTGVVFE 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                  ++         SV GGGRYD L+  F GQ  PA GF++G   L + L+  E+ 
Sbjct: 278 CFDSAGEVS--------RSVFGGGRYDDLIEGFGGQPTPAVGFAVGHETLSLLLERAEAR 329

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
           +         +++      ++        + LR  G R E  L + ++FG Q+ YAD   
Sbjct: 330 SAGTFGTDYYVLSV----GETRPVAARIARELRERGHRVETDL-ADRSFGAQMNYADSIG 384

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
               +I G  +   G + +KD+  G + +  +++     E
Sbjct: 385 AETVVIVGERDLESGEVTVKDMYSGDQTTTPVESFPGESE 424


>gi|160900450|ref|YP_001566032.1| histidyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160366034|gb|ABX37647.1| histidyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 431

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 94/464 (20%), Positives = 181/464 (39%), Gaps = 67/464 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  KL     +G  D    E      +   +R +   + +  + TP++E++    + +
Sbjct: 1   MAKPEKL--SAVKGMNDILPAESARWEWLEAQVRELMARFAYRNVRTPIVEHTQLFVRGI 58

Query: 61  PD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K ++S +D  +G+ ++LR + TA L R   EN        R + +GP+FR+E
Sbjct: 59  GEVTDIVEKEMYSFEDKLNGERLTLRPEGTASLVRATIENNLLYDGGKRMWYMGPMFRHE 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR+RQF Q   + +G +    DAE+ M+     + +G+                  
Sbjct: 119 RPQRGRYRQFHQIGAEALGFAGPDVDAELIMLAVSLWKQLGLT------------QWRLE 166

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG------EGRTDNSGDFTKGANL 232
           +  +G   + + + + ++       D    +  + +        + +     +   GA  
Sbjct: 167 INSLGQPEERQAHRQALIAYLEQHQDVMDEEAKRRMYSNPLRVLDTKNPAMQEMVNGA-- 224

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
                  ++ FL          L  ++                               ++
Sbjct: 225 -----PRLLDFLGEGSLAHFDGLKAILDAN-----------------------GVPWTVN 256

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
             +VRGL+YY   V+E I               G++  GGRYD L+ +  G++ PA G++
Sbjct: 257 PRLVRGLDYYNLTVFEFIT--------DMLGSQGTICAGGRYDYLIEQVGGKSAPAVGWA 308

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           +G+ R++  +K L            +    +  D  ++       Q LR AG+R +M   
Sbjct: 309 LGVERVLELVKELG----TDIPAPTLHAYAIVPDVAAMPVALRTLQQLREAGVRVQMHAA 364

Query: 413 SS---KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           S+    +  +Q K AD      A+I G+ E  +G++ +K L  G
Sbjct: 365 SAEGMGSMKSQFKKADASGAHFALIFGSDELQQGLVTVKSLRDG 408


>gi|167619822|ref|ZP_02388453.1| histidyl-tRNA synthetase [Burkholderia thailandensis Bt4]
          Length = 446

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 105/499 (21%), Positives = 198/499 (39%), Gaps = 66/499 (13%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + +
Sbjct: 5   KRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ ++LR + TA + R   E+      P R + IGP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         G+ E
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSL------GLAE 178

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +   H  + +         +D   +  L    L + + +     +  + A         +
Sbjct: 179 ERAAHRVELIKYLEQHADKLDDDAQRRLYTNPLRVLDTKNPALQEIVRNA-------PKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL          L  L+K                         +    I+  +VRGL+
Sbjct: 232 IDFLGDVSRAHFEGLQRLLKAN-----------------------NVPFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNF 417
            LK          E   V +  +     +  +  +  + LR  G+   +     G+  +F
Sbjct: 321 LLKEEHLVP----EQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQITI 476
            +Q+K AD      A+I G  E + G   +K L   G +  + +            Q ++
Sbjct: 377 KSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSV------------QQSV 424

Query: 477 PISELVSTVKKILQENKEE 495
           P+  L   +   +    E+
Sbjct: 425 PVESLTEFLINAMVATAED 443


>gi|229918418|ref|YP_002887064.1| histidyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259511948|sp|C4L534|SYH_EXISA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229469847|gb|ACQ71619.1| histidyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 427

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 100/482 (20%), Positives = 186/482 (38%), Gaps = 66/482 (13%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNK 68
           + PRG  D     +     + + +R++   Y +  I TP+ E ++   + + +  D   K
Sbjct: 3   KAPRGTQDLLPGTVETWQYVEEKLRDMSARYNYKEIRTPIFETTNLFTRSVGETTDIVQK 62

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRFR 126
            +F+L        +LR + TA + R    N        P + Y +GP+FR E+   GRFR
Sbjct: 63  EMFTLVKKGKDEYTLRPEGTASVVRAFVTNKLFGNPDQPTKLYYMGPMFRYERPQKGRFR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           Q  Q  V+ +GSS    DAE+  +     ++ G+++    +        D          
Sbjct: 123 QLHQYGVEAIGSSDPAVDAEVISLAYSIYKSFGLQKIKVVVNSLG----DAESRNAHRDA 178

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +  E +      D   +     +++L  +   D+          + +    ++ +L+ 
Sbjct: 179 LIRHFEPVAGELCQDCQSRLYKNPLRILDCKVDRDHP---------SMKTAPSILEYLN- 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                              E+       +   +   G      ++  T+VRGL+YYT   
Sbjct: 229 -------------------EESKAYFEQVLAQLDALG---VAYEVDPTLVRGLDYYTHTA 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E       M+E +      ++ GGGRY+GLV    G ++P  GF IG+ RLI+AL++  
Sbjct: 267 FEI------MSEAEGFGAITTLCGGGRYNGLVQDIGGPDMPGIGFGIGLERLILALENEG 320

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                   +          + +         Q+LR  G +A+      + F  Q K ADR
Sbjct: 321 VLPELETGLDV--FIVAQGEKEVELTATRLLQLLRMEGFKADRDY-QGRKFKGQFKQADR 377

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                 +I G  E  RG   +KD+  G+++                   +P+S +   ++
Sbjct: 378 LKAKFTVILGDDEVERGAAALKDMTTGEQVD------------------VPLSAVADKIR 419

Query: 487 KI 488
           ++
Sbjct: 420 EL 421


>gi|83720664|ref|YP_442756.1| histidyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|257138966|ref|ZP_05587228.1| histidyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|123726593|sp|Q2SWE3|SYH_BURTA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|83654489|gb|ABC38552.1| histidyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 446

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 106/499 (21%), Positives = 198/499 (39%), Gaps = 66/499 (13%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + +
Sbjct: 5   KRKLEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ ++LR + TA + R   E+      P R + IGP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+RQF Q  V+ +G +   ADAE+ MM     E +G+      I         G+ E
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTGIKLEINSL------GLAE 178

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +   H  + +         +D   +  L    L + + +     +  + A         +
Sbjct: 179 ERAAHRVELIKYLEQHADKLDDDAQRRLYTNPLRVLDTKNPALQEIVRNA-------PKL 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL          L  L+K                         +    I+  +VRGL+
Sbjct: 232 IDFLGDVSRAHFEGLQRLLKAN-----------------------NVPFTINPRLVRGLD 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI R++ 
Sbjct: 269 YYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNF 417
            LK          E   V +  +     +  +  +  + LR  G+   +     G+  +F
Sbjct: 321 LLKEEHLVP----EQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAGASF 376

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQITI 476
            +Q+K AD      A+I G  E + G   +K L   G +  + +            Q ++
Sbjct: 377 KSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSV------------QQSV 424

Query: 477 PISELVSTVKKILQENKEE 495
           P+  L   +   +    E+
Sbjct: 425 PVESLTEFLINAMVATAED 443


>gi|34557793|ref|NP_907608.1| histidyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|39932011|sp|Q7M8S6|SYH_WOLSU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|34483510|emb|CAE10508.1| HISTIDYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 442

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 139/460 (30%), Positives = 224/460 (48%), Gaps = 36/460 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M ++  +      GF D   +E   ++R+L ++  ++E +GF PIETP LEY++ L K  
Sbjct: 1   MKEQALITPRTLSGFKDRLPQEAMAKSRLLRTVSEVFEGFGFVPIETPHLEYAEILVKQG 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   K ++   D  G+ ++LR+D T PLAR+++++ + +  P + Y IG VFR E+ 
Sbjct: 61  --SDEIQKELYRFFDHGGRDVALRFDQTVPLARFISQHRNALGLPFKRYAIGNVFRGERA 118

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F QCD D +GS +  +DAE+  ++  +L+A+G     + I +NNRKIL+GI +
Sbjct: 119 QRGRYREFTQCDFDFIGSESIGSDAEIIQVIYASLKALG--IERFTISMNNRKILNGICD 176

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+       +   VLR IDKLDK G + V   L E              L+ E    +
Sbjct: 177 YFGVKE-----QTSDVLRIIDKLDKIGEESVIKELVEE-----------LGLSQESARGI 220

Query: 241 VSFLSIDLEKSMHELYELVKGTI----AGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           + F S+  E+S  E +  V        +  +G  E+  +  ++     +    KI+ +I 
Sbjct: 221 LGFTSLKQERSSEEFFAKVASYEGLSDSLREGMGEMRALYAILDTLEMDRACYKINFSIA 280

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL YYTG VYE  L              GSV  GGRYD L   F  + +   G SIG+ 
Sbjct: 281 RGLGYYTGIVYETTL--------DALPSIGSVCSGGRYDNLTQSFSKERMSGVGASIGVD 332

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+    +LE             +     +   L+      + LRT GI++E++  + K 
Sbjct: 333 RLLA---ALEELGLLEGRGTSAQVLVACMEESQLAYSYKVAERLRTLGIKSEVYPEAVK- 388

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
               L YA+ +  P   + G  E  +G++ +KD+  G + 
Sbjct: 389 PKRSLAYANSKGHPYVAVIGEDELKQGVVTLKDMQWGDQK 428


>gi|14590213|ref|NP_142278.1| histidyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|3915065|sp|O58028|SYH_PYRHO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|3256679|dbj|BAA29362.1| 431aa long hypothetical histidyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 431

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 125/484 (25%), Positives = 218/484 (45%), Gaps = 55/484 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  +G  D   +++  R  + + IR ++E YGF  I TP++EY+        +E    K
Sbjct: 2   IERVKGTRDFLPEDMAKRRWVFEKIREVFEAYGFKEILTPVMEYTKLFQLRSGEE--VVK 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++ +D  G+ +SLR D+T+ +AR    +F     P + Y I  +FR E+   GR+R+F
Sbjct: 60  QLYAFKDKGGRDVSLRPDMTSSVARLYVNSFQMAPKPIKWYYIANMFRYEEPQSGRYREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +GS    ADAE+  +  ++  + G++  D+ + I +R +LD     +G+  D 
Sbjct: 120 WQAGVELIGSDKVEADAEVIALFVESYLSTGLR--DFTVNIGDRILLDEFAGMLGVSDD- 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                + ++R IDK DK   +    LL E              L   +I+ ++  + I  
Sbjct: 177 -----IGLMRIIDKRDKLSQEEFINLLKEF------------GLGESEIEKVLELVEIKG 219

Query: 249 -EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
              ++  L E +  +   ++  ++L  +++L+   G   + I+I   I RG +YYT  V+
Sbjct: 220 RPDNVLPLAEELFKSKKAKEEISKLYKLTDLLEWYGV-KDWIRIDLGIARGFDYYTSIVF 278

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           EAI    +                 RYD L+  F G+  PATGF+IGI RL+  L+    
Sbjct: 279 EAISPNELGIGSIGGGG--------RYDNLIEIFGGKPTPATGFAIGIERLLPILEWKGL 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                K      +  +    D           LR   I+ ++ L S +  G  L YA+R 
Sbjct: 331 IP---KPQTGPEVFVIPL-KDMEKVAINIAVKLRREKIKTDIEL-SGRKLGKALDYANRV 385

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
              L II G  +  RG++ I+D+  G++                    + ++E+V  VK 
Sbjct: 386 GAKLVIIVGKRDVERGVVTIRDMESGEQ------------------YNVSLNEIVDKVKN 427

Query: 488 ILQE 491
           +L+ 
Sbjct: 428 LLKR 431


>gi|77362056|ref|YP_341630.1| histidyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|123586939|sp|Q3ICZ6|SYH_PSEHT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|76876967|emb|CAI89184.1| histidine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 426

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 108/485 (22%), Positives = 197/485 (40%), Gaps = 73/485 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   + ++  ++ + +R    ++G+  I  P++E +D   + +
Sbjct: 1   MAKQ----IQAVRGMNDCLPGDTQVWQKVENILRETVASFGYQEIRFPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   EN        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFADRNGDLLTLRPEGTAVCVRAGNENGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  ++  G ++   DAE+ ++ A   E+ GI                  N
Sbjct: 117 PQKGRYRQFHQFGLETFGIASADIDAEVILLTAQLWESFGISEHVRLELNSLGSNEARAN 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +    +       A
Sbjct: 177 YRDALVAYLEQHLDVLDE------------DSKRRMYSNPLRVLDSK--NPDVQAILINA 222

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
              SE +D                            +       + E +  +G    +  
Sbjct: 223 PKLSEHLDT---------------------------ESKEHFANLCERLDAAG---VKYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E I               G+V  GGRYDGLV +  G+  PA G
Sbjct: 253 INEKLVRGLDYYNRTVFEWIT--------DSLGAQGTVCAGGRYDGLVEQLGGKATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE             +        +  +  +    LR     +R  
Sbjct: 305 FAMGLERLVLLLQALE---CVGDIRRNADVYLASMGDKASIQAPIIAATLRRDVPNLRV- 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWR 467
           M      NF  QLK AD+ +  +A+I G  E  +G++ IK L +  ++++ E++  ++  
Sbjct: 361 MVHAGGGNFKKQLKRADKSDALVAVIIGEDELEQGVVTIKYLRERKEQVTLELEQAKALL 420

Query: 468 EARVA 472
              + 
Sbjct: 421 AELIN 425


>gi|161511228|ref|NP_840246.2| histidyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|46397795|sp|Q82XU9|SYH_NITEU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
          Length = 420

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 105/464 (22%), Positives = 175/464 (37%), Gaps = 68/464 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
               RG  D    E  +     D+IR     YG+  + TP++E +D   + + +  D   
Sbjct: 5   IRAVRGMNDILPDESGLWAFFEDTIRTWLAAYGYRNLRTPIVEQTDLFVRSIGEVTDIVE 64

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D  +G+ ++LR + TA   R V E+      P R Y  GP+FR+E+   GR+R
Sbjct: 65  KEMYTFVDHLNGENLTLRPEGTASCVRAVIEHNLLYAGPQRLYYSGPMFRHERPQKGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILDGI 178
           QF Q  V+ +G +    DAE+ +M A     +GI                   R  L   
Sbjct: 125 QFHQVGVEALGFAGPDIDAELIVMCARLWRLLGISDVRLEISTLGSTESRSVYRARLISY 184

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           LEK     D+            D   +     +++L  +       +   GA        
Sbjct: 185 LEKFCDDLDE------------DARRRLKTNPLRILDSK--NPAMREILAGA-------P 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   L  D       L  +++      +  N L                       VRG
Sbjct: 224 RLFDDLDEDSLAHFEALQRILRNQDISFEINNRL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E +          K    G++  GGRYDGL+++  G+  PA GF++GI R+
Sbjct: 261 LDYYNRTVFEWVT--------DKLGAQGTICAGGRYDGLIAQIGGKPAPACGFAMGIERI 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +  +    +            I  +     +        + LR  G++  +      NF 
Sbjct: 313 LALMGENGAVG----AHAIPDIYVVHQGEAAAEFSWKVAESLRDDGLKV-VLHSGGGNFK 367

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIK 461
            Q+K AD      A I G  E   G + IK L +  +++  ++ 
Sbjct: 368 AQMKKADASGARFAAIIGEDEVVAGQISIKPLREAAEQIRVDLA 411


>gi|257871024|ref|ZP_05650677.1| histidyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805188|gb|EEV34010.1| histidyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 437

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 104/497 (20%), Positives = 194/497 (39%), Gaps = 69/497 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + ++ R ++ +Y ++ I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQRPKGTNDILPGESEKWQFVEETARLVFRDYQYNEIRTPIFEHFEVIARSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+AR   EN         P + + IGP+FR E+   
Sbjct: 61  VSKEMYDFYDKGERHVTLRPEGTAPIARSYVENKLFGPEYNKPYKVFYIGPMFRYERPQK 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR RQF Q  V+  GS+    D E   M  D  + +G+ +    I        RK     
Sbjct: 121 GRLRQFHQIGVEAFGSANPATDVETMAMAMDFFKQLGLSQLRLVINSLGDKETRKNYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L       + +L+E        D   +     +++L  + + D                 
Sbjct: 181 LIDYLSPHEAELSE--------DSKRRLHENPLRVLDSKDKRDQQF---------VADAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +LS + +     +  ++                              +I S +VRG
Sbjct: 224 SILDYLSPEAKAHFETVITMLDAL-----------------------DIPYEIDSNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT  ++E       M+E  K     ++  GGRYD LV    G   P  GF++G+ RL
Sbjct: 261 LDYYTHTIFEI------MSEAPKMGAQATICAGGRYDHLVEELGGPQTPGFGFAMGLERL 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +++ E     + E+       +     +  +     Q +R  G  A+     ++   
Sbjct: 315 LITMEAEEVVIPALNELDA---YVVGLGEATNLEALKVVQAIRNFGFSADRDF-MNRKAK 370

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            Q K AD++   L +  G  E +  ++ IK +A   E   ++ +                
Sbjct: 371 AQFKSADKQGARLVLTLGENELAEQVINIKSMASRIEKQFKLADLYDH-----------F 419

Query: 479 SELVSTVKKILQENKEE 495
            E+   +  IL +  EE
Sbjct: 420 DEIYDEMTTILIKQGEE 436


>gi|81301072|ref|YP_401280.1| histidyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|123741727|sp|Q31KX6|SYH_SYNE7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|81169953|gb|ABB58293.1| histidyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 435

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 106/488 (21%), Positives = 193/488 (39%), Gaps = 72/488 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    E ++   I  + R I        + TP+ E +    + + +  D   
Sbjct: 4   LQALRGTRDILPPETQVWQWIEQTAREILGRAAVQEVRTPIFEQTALFERGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++S +D   + ++LR + TA   R   E+   +     R +  GP+FR E+   GR R
Sbjct: 64  KEMYSFRDRGDRSLTLRPEGTAGTVRAYIEHGLASQGGVQRLWYTGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILDGI 178
           QF Q  ++ +G++   ADAE   +    L+A+G+K          D       R+ L   
Sbjct: 124 QFHQLGLELLGTADARADAEAIALATQILQALGLKNLRLDLNSVGDASDRAAYRQALVDY 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L       D             D  D+     +++L  +     +            +  
Sbjct: 184 LTPYAADLD------------PDSRDRLERNPLRILDSKDERTQA---------IVAEAP 222

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +LS    +   ++ +L+                        +     ++   +VRG
Sbjct: 223 SLHDYLSERSRQLFEQVQQLLT-----------------------HLGIDYRLEPKLVRG 259

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E I                +V GGGRYDGLVS+  G   PA G+++G+ RL
Sbjct: 260 LDYYTHTAFEII--------SSDLGAQATVCGGGRYDGLVSQLGGPETPAVGWAMGLERL 311

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+  ++          +    +   + +  +  +  Q LR+AG   E+ L S   FG
Sbjct: 312 VLLLQQGQAVP-----PATLDFYLVSRGAIAEGQALILAQKLRSAGFGVELDL-SGSAFG 365

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE----IKNNESWREARVAQI 474
            Q K ADR      ++ G  E  +G + +K L  G++ + +    +++++ WR    A  
Sbjct: 366 KQFKRADRSGAIACLVLGDAEAEQGQVNLKWLQSGEQQTLDQSELLQDSDHWRSRLQAAR 425

Query: 475 TIPISELV 482
           T+   E+ 
Sbjct: 426 TVSPVEVA 433


>gi|170760205|ref|YP_001788375.1| histidyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|229558649|sp|B1L097|SYH_CLOBM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|169407194|gb|ACA55605.1| histidine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 415

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 188/468 (40%), Gaps = 62/468 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + +  RNI  ++G   I TP+ EY++   + + +  D 
Sbjct: 1   MSLQAPKGTKDLLPTESYKWQYLENKFRNIAADFGCREIRTPVFEYTELFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + T+P  R   E        P + Y   PV R E    GR
Sbjct: 61  VQKEMYTFEDKAGRSITLKPEGTSPAVRAFVEGRLFNETQPTKMYYFTPVMRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            RQ  Q  ++  G+   + DAE+  +     + +G++      +       RK  +  L+
Sbjct: 121 LRQHHQFGIEIFGAKDASVDAEVISIPVGIYKELGVEGVELNINSIGCPKCRKTYNEALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K      DKL              +F    +++L  + + D   +  K A +       +
Sbjct: 181 KYLSKNYDKL--------CSTCKTRFDKNPLRIL--DCKVDTCKEIVKDAPI-------I 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++  +       L   +                            + K+   IVRGL+
Sbjct: 224 LDYICDECRDHFEALKSYLD-----------------------VLDIKYKVDPFIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+  V+E I+               ++  GGRYD L+    G ++PA GF +GI RL++
Sbjct: 261 YYSKTVFEFIIDD------------ITICAGGRYDYLIEEIGGPSMPAVGFGMGIERLLL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+        I E   V +   +    +  +     + LR   I+ E+     K+   Q
Sbjct: 309 TLQEK---AIEIPEEAYVDLYLGNMGDKAKLEVLKLAKELRDRHIKCEIDH-MGKSVKAQ 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +KYA++     +++ G  E + G + +K +  G+++  +IK  ++  +
Sbjct: 365 MKYANKIGAKYSMVLGEEELNTGKVALKRMEDGQQIEVDIKEIDTLIK 412


>gi|119476376|ref|ZP_01616727.1| histidyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450240|gb|EAW31475.1| histidyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 417

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 101/480 (21%), Positives = 192/480 (40%), Gaps = 67/480 (13%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   +E  +   +  ++R +   YG+  I  P++E ++   + + +  D   K +++ 
Sbjct: 1   MNDLLPEESALWQYLESAVREVLAGYGYQEIRFPIVEQTELFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D +G+ +++R + TA   R   +N         R +  GP+FR E+   GR RQF Q  
Sbjct: 61  NDRNGESLTMRPEGTASCVRACLQNSLLDNQQIQRLWYHGPMFRYERPQKGRLRQFHQIG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           V++ G +    DAE+ +M A   + +GI      + +N+   L+   E   +   D L++
Sbjct: 121 VESFGVATPDVDAELILMTARLWKRLGISEY-LTLELNSIGNLEA-RENYKVALVDYLSQ 178

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               L   D   +     +++L  +     +           +Q   +  +L  +     
Sbjct: 179 HFEQLD-EDSQRRLESNPLRILDSKSAQTQA---------LLDQAPALADYLDDESSDHF 228

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            EL  ++     G                         I+  +VRGL+YY+  V+E    
Sbjct: 229 DELRGVLDAAGIG-----------------------YSINPRLVRGLDYYSKTVFEWTT- 264

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                   +    G+V  GGRYDGLV++  G+  PA GF++G+ RL + ++ L    ++I
Sbjct: 265 -------DQLGAQGTVCAGGRYDGLVAQLGGKPTPAIGFAMGLERLSLIVQVLNKVPDSI 317

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADRRNCP 430
                V          + +     ++ LR     ++ ++  G   +F +Q K AD+    
Sbjct: 318 NNNPDVYFVVAG--DKAKAAAFQLSEQLRDKIPSLKLQLHCGGG-SFKSQFKKADKSGAS 374

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           +A+I G  E  +G++ +K                 W    + Q T+   EL   +   L 
Sbjct: 375 IALIIGDNEAEQGVVNVK-----------------WLRNDIEQNTVNNGELADLLVAALN 417


>gi|327270491|ref|XP_003220023.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 503

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 124/492 (25%), Positives = 216/492 (43%), Gaps = 47/492 (9%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
             +  + P+G  D   K++ IR  I  +I + ++ +G   I+TP+ E  + L +   D+ 
Sbjct: 54  ENIILKTPKGTRDFSPKQMAIRENIFATIISCFKRHGAVTIDTPVFERKELLFENSGDD- 112

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--P 122
             ++ V+ L+D  G+ +SLRYDLT P ARY+A N    +   + Y+IG V+R +      
Sbjct: 113 --SELVYDLKDQGGELLSLRYDLTVPFARYLAMNK---ITHFKRYQIGKVYRRDSPTMAR 167

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+R+F QCD D  G          C+ +   + +  ++  D+ I +N+R+IL+GI    
Sbjct: 168 GRYREFCQCDFDIAGQYDPMIPDAECLKIMHEILS-ALQFGDFLIRVNDRRILNGIFTAC 226

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+         L     +DKLDK   + VK  + + R            L  E +D +  
Sbjct: 227 GVSEK----NFLSACSTLDKLDKMTWEEVKREMVKER-----------GLYPEAVDHLGE 271

Query: 243 FLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +    S+ E       +       +G  ++ ++ E +   G   +++    ++ RGL
Sbjct: 272 YVRLHGGLSLIENLLHDPKLVHNKLAMEGLEDMKLLFEYLTLFGIT-DKVSWDLSLARGL 330

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG +YEA L        ++ +  GSV GGGRYDGLV+ F  +             + 
Sbjct: 331 DYYTGVIYEAGLLHQQDGHLKESLCVGSVAGGGRYDGLVASFDPKERK-VPCVGVSIGVE 389

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                +E  T          +       + L+        L  A I+AEMF   +     
Sbjct: 390 RIFSIIEQITEEEIRTTETQVLVATAQKNFLNARMKLISELWDADIKAEMFYKKNPKMLK 449

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           QL+Y + R  PL  I G  E   G+++++D+   KE+                   +P  
Sbjct: 450 QLQYCEERRIPLVAIIGQQELDDGVVKLRDVITRKEI------------------NVPKE 491

Query: 480 ELVSTVKKILQE 491
           + +  +KK L++
Sbjct: 492 KFIEEIKKRLKK 503


>gi|146302779|ref|YP_001197370.1| histidyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|189082295|sp|A5F9R5|SYH_FLAJO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|146157197|gb|ABQ08051.1| histidyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 475

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 140/500 (28%), Positives = 222/500 (44%), Gaps = 76/500 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  R  I+ +I+  +E +GF PIETP  E SD+L GK+  + DR 
Sbjct: 4   KPSIPKGTRDFSPAEVSKRQYIIQTIKANFEKFGFQPIETPSFENSDTLMGKYGEEGDRL 63

Query: 67  NKGVFSLQDDDG--------------QWI--------------------------SLRYD 86
              +F + +                 + +                          +LRYD
Sbjct: 64  ---IFKILNSGNFFYNKSKIELPESIEELQLNSAEKITLEQRIELNKFTGKISEKALRYD 120

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
           LT P ARYV ++   I FP + Y+I PV+R +    GRFR+F QCD D VGS +   + E
Sbjct: 121 LTVPFARYVVQHQSEIEFPFKRYQIQPVWRADNPQKGRFREFFQCDADVVGSKSLWQEVE 180

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  +      ++G++     I INNRKIL GI E IG          +    A+DKLDK 
Sbjct: 181 LVQLYDTVFTSLGLEG--VTIKINNRKILSGIAEVIGASDK-----LIDFTVALDKLDKI 233

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIA 264
           G  GVK  + E              ++ + +  +    +        + +L +L+  +  
Sbjct: 234 GEDGVKKEMIEK------------GISEDALVKVQPLFNFSGTFADKIAQLSDLLSSSEE 281

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
           G KG  EL  I + V   G ++  + +  T+ RGL YYTG ++E            K V 
Sbjct: 282 GMKGVEELKFICDNVADLGLSTAVLDLDVTLARGLNYYTGAIFEV--------AAPKTVA 333

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
            GS+GGGGRYD L   F  +N+   G S G+ R+ + L+ L+     +      +     
Sbjct: 334 MGSIGGGGRYDDLTGIFGLKNMSGVGISFGLDRIYLVLEELQLFPETVAATSKAIFLNFG 393

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
                        Q LR   I+ E++  + K  G Q +YAD+R  P A++ G  E +   
Sbjct: 394 DKEAL--YASKAIQKLRQENIKVELYPDNVK-VGKQFQYADKRLIPFAVLVGDQEINSNS 450

Query: 445 LQIKDLAKGKELSREIKNNE 464
             +K+L  G+++S + +  +
Sbjct: 451 YALKNLVTGEQVSVDFEGLK 470


>gi|212690605|ref|ZP_03298733.1| hypothetical protein BACDOR_00091 [Bacteroides dorei DSM 17855]
 gi|212666851|gb|EEB27423.1| hypothetical protein BACDOR_00091 [Bacteroides dorei DSM 17855]
          Length = 464

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 142/491 (28%), Positives = 219/491 (44%), Gaps = 65/491 (13%)

Query: 2   GKKTKL----RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL- 56
            K  ++    +  +P+G  D    E+  RN I ++IR+++  +G+  IETP +E   +L 
Sbjct: 4   NKLNRIIMAAKPGIPKGTRDFSPVEMAKRNYIFNTIRDVFHLFGYQQIETPSMENLSTLM 63

Query: 57  GKFLPDEDRPNKGVFSLQDDDG--------QWIS--------------LRYDLTAPLARY 94
           GK+  + D   K +F +Q+           + +S              LRYDLT P ARY
Sbjct: 64  GKYGDEGD---KLLFKIQNSGDYFNGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARY 120

Query: 95  VAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADT 154
           V  + D I FP + Y+I PV+R ++   GR+R+F QCD D VGS++   + E+  M+   
Sbjct: 121 VVMHRDEISFPFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELVQMIDRV 180

Query: 155 LEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL 214
               G+      I INNRKIL GI E IG     + ++ + +  AIDKLDK GL+ V   
Sbjct: 181 FGKFGV---RVSIKINNRKILTGIAEIIG-----EADKIVDITVAIDKLDKIGLENVNAE 232

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           L                +  E ID +     LS   E+ +  L  ++  +  G KG  E 
Sbjct: 233 LA------------SKGIPQEAIDKLQPIILLSGSNEEKLETLKTVLAASETGMKGVEES 280

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
             I + V   G  S  +++  T+ RGL YYTG ++E          K   V  GS+ GGG
Sbjct: 281 EFILKTVSTLGVKS-EVELDLTLARGLNYYTGAIFEV---------KALDVQIGSISGGG 330

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           RYD L   F    +   G S G  R+   L  L+           +L           + 
Sbjct: 331 RYDNLTGVFGMDGMSGVGISFGADRIFDVLNQLDLYPKEAVNGTELLFVNFGDKEA--AY 388

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  +R  G+RAE++  ++K    Q+ YA+ +  P   I G  E + G L +K++  
Sbjct: 389 CLPILAKVRETGVRAEIYPDAAK-MKKQMGYANDKQIPFVAIVGENEMNEGKLTLKNMTT 447

Query: 453 GKELSREIKNN 463
           G++        
Sbjct: 448 GEQSLVTPDEL 458


>gi|227833227|ref|YP_002834934.1| Histidyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184213|ref|ZP_06043634.1| histidyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454243|gb|ACP32996.1| Histidyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 425

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 104/480 (21%), Positives = 188/480 (39%), Gaps = 68/480 (14%)

Query: 1   MGKKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K + +A   P+G  D    +  I  ++ ++  +     GF  IE P+ E +    + 
Sbjct: 1   MSDKKQFKALSAPKGVPDYVPPQSAIFAKVREAFVHQAHLSGFQHIELPVFEDTSLFARG 60

Query: 60  LPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRN 117
           + +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR 
Sbjct: 61  VGESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLNYFGPFFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGI 169
           E+   GR+RQ  Q  V+ +G      DAE+  +   +  ++G+ +         D+    
Sbjct: 121 ERPQAGRYRQLQQVGVEAIGVDDPALDAEIIALADRSYRSLGLSQFRLELTSLGDHDCRP 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L K+ L  + K    L  LR +D         V+  L +            
Sbjct: 181 AYREKLQEFLFKLDLDEETKARAELNPLRVLDDKRP----EVQEQLVD------------ 224

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                    +M+  L+ +  +    +  L+                              
Sbjct: 225 -------APLMLDHLNAECREHFETVTGLLDD-----------------------MGVPY 254

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +   
Sbjct: 255 TINPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQELSGI 306

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G+ +G+ R ++AL++       + E   V +  +   + +  K       LR AGI A+M
Sbjct: 307 GYGLGVDRTVLALEAEGVELEGVDE--RVAVYGVALGAAAKQKMVSIINDLRKAGISADM 364

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             G  +     +K ADR N   A++ G  E   G + +KDL   ++    + +  +    
Sbjct: 365 SFG-DRGLKGAMKGADRANARFALVLGDQELEAGSVALKDLRAHEQHDVPVGDIVNQLRQ 423


>gi|313205057|ref|YP_004043714.1| histidyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444373|gb|ADQ80729.1| histidyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 451

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 135/483 (27%), Positives = 215/483 (44%), Gaps = 61/483 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I ++I++++  YGF  IETP +E   +L GK+  + D  
Sbjct: 3   KPSIPKGTRDFTPQEMANRNYIFNTIKDVFRLYGFQQIETPAMENLSTLMGKYGEEGD-- 60

Query: 67  NKGVFSLQDDD--------GQWI--------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F + +           + +               LRYDLT P AR+V ++ + I F
Sbjct: 61  -KLLFKILNSGDYMNGLADDELLGRNSIKLTNKISEKGLRYDLTVPFARFVVQHQNEISF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCDVD VGS +   + E+  ++ +    + I   +
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDVDVVGSDSLLNELELIQIVDEVYRRLKI---N 176

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG            +  AIDK+DK GL+ V             
Sbjct: 177 VVIKINNRKILSGIAEIIGEAEK-----ITDITVAIDKMDKIGLEKV------------N 219

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           +      ++ E I  +   L +     + +++L  ++  +  G KG +EL  I  L    
Sbjct: 220 EEIASKGISDEAIAKLQPILKLSGTNAEKLNQLKTVLADSEVGLKGVSELETIFGLCEAM 279

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
                 I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 280 KV-QTTIELDLTLARGLNYYTGAIFEV---------KALDVEMGSITGGGRYDNLTGVFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            + V   G S G  R+   L  L       +E     I  +      L     +   LR 
Sbjct: 330 MEGVSGVGISFGADRIYDVLNQLNLYPETSQEQT--RILFVSFGEKELMYCLPWLSALRN 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            G+ AE++   +K    Q+ YAD +  P   I G  E     + +K++  G++    ++ 
Sbjct: 388 KGVNAEIYPEPAK-MKKQMSYADNKRIPFVAIVGETEMKENKVMLKNMKTGEQSLASLEE 446

Query: 463 NES 465
              
Sbjct: 447 LVE 449


>gi|118579805|ref|YP_901055.1| histidyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|259511953|sp|A1ANS7|SYH_PELPD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|118502515|gb|ABK98997.1| histidyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 414

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 91/458 (19%), Positives = 170/458 (37%), Gaps = 56/458 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +     +G  D   +E      I  + R I+E  GF  I  P++E ++   + + D  D 
Sbjct: 1   MAITAIKGCNDILPEESGRWQYIEQAARRIFERNGFSEIRVPIMEKTELFCRSIGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K +++  D     ++LR + TA + R   E+      P  + Y +GP+FR E+   GR
Sbjct: 61  VEKEMYTFTDKGENSVTLRPEGTAGVMRAYIEHKMHAQDPLAKLYYLGPMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           +RQF Q   +  G +    DA++  M+      +G+         +            + 
Sbjct: 121 YRQFHQIGAEVTGVTDPLVDAQVLNMLCAFFHEIGLDEPTLQINSLGCPDCRPAYRAALM 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                +L+         D   +F +  ++ L  +           G    ++    M+  
Sbjct: 181 EFLQGRLDRL-----CDDCKRRFTVNPLRTLDCKS---------AGCAEATKGAPAMLDH 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L    +     +   +  T +                       R  I+  +VRGL+YYT
Sbjct: 227 LCTACDDHFSSVKRYLDLTGS-----------------------RYSINPRMVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                +V  GGRYDGL+S+  G ++P  GF++G+ R+ + L 
Sbjct: 264 RTTFELVT--------GLLGAQSAVAAGGRYDGLISQLGGPSIPGIGFAMGVERVALLLG 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             + S           +      +    K       L+  GIR EM     K+  +Q++ 
Sbjct: 316 ERDFSRRP-------DLFIATMGAGQRDKAFCLLTKLQNQGIRVEMDY-EGKSLKSQMRR 367

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           AD+     +++ G  E + G    K +  G +    ++
Sbjct: 368 ADKLRARFSVVIGENELATGRASFKRMEDGVQNEAALE 405


>gi|315149220|gb|EFT93236.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 433

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 96/459 (20%), Positives = 187/459 (40%), Gaps = 50/459 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + ++ R I+++Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQKPKGTNDILPGTSEKWQFVEETARLIFKDYQYQEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   EN         P +TY +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVENKLYGPEYTKPYKTYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS     D E+  M  D  + +GI++    I     K       + 
Sbjct: 121 GRLRQFHQIGVEAFGSENPALDVEIMAMALDFFKQLGIQQIKLVINSLGDKETRATYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +     L    + D   +     +++L  + + D          +   +   ++ 
Sbjct: 181 LIDYLEPHMAEL----SEDSQRRLHENPLRVLDSKDKKDK---------VIVAEAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+   +     + +++       +  + +                       VRGL+YY
Sbjct: 228 YLNEPSKAHFEAVTDMLDLLEIPYEIDSNM-----------------------VRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E       M+E  K     ++  GGRY+GLV    G + P  GF +GI R+++ +
Sbjct: 265 THTIFEI------MSEAPKMGAQSTICAGGRYNGLVEELGGPDTPGFGFGMGIERVLLTM 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ E     + E+       +   S++        Q +R  G  A+     ++    Q K
Sbjct: 319 EAEEVVIPALSELDA---YVVGIGSETNVAALQLVQSIRNFGFSADRDY-MNRKPKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD+    L +  G  E + G++ +K +A  +E S  + 
Sbjct: 375 TADKLQAKLVLTIGENELNEGIVNVKSMATREEKSFPLS 413


>gi|291531007|emb|CBK96592.1| histidyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 426

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 106/464 (22%), Positives = 190/464 (40%), Gaps = 58/464 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF-LPDEDRPNK 68
           + PRG  D   KEI   + +    RN+ E YG   I TP  E+++   +      D   K
Sbjct: 6   KKPRGTEDKLPKEIYKWHTVEKIARNVAEAYGCKEIRTPTFEHTELFQRGVGGTTDVVQK 65

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            +++  D  G+ I+L+ + TA   R V EN     V P +TY     FR E    GR R+
Sbjct: 66  EMYTFNDKKGRSITLKPEGTAGAVRAVIENGLLNDVLPLKTYYFTRCFRYEAPQSGRLRE 125

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKILDGILEKIG 183
           F Q  ++  G+++  ADAE+  +  D ++++G+K      +       R      L++  
Sbjct: 126 FNQVGIEYFGTASPAADAEVIALANDIIKSLGVKNISLEINSIGCPKCRAEYHKALKEYY 185

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D+L            L++     ++LL  +    +S           +   +++ +
Sbjct: 186 SQYKDQL--------CGTCLERLDRNPMRLLDCKSEICSSF---------KKDAPMILDY 228

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D  +    + + +                               ++  IVRGL+YYT
Sbjct: 229 LCDDCREHFENVKKRLD-----------------------VLGVSYTVNPLIVRGLDYYT 265

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E I               G+V  GGRY+GLV    G +VP  GF++G+ R+I+ ++
Sbjct: 266 NTVFEFISNE--------IGSQGAVCAGGRYNGLVEEIGGNSVPGLGFAMGLERIIMVME 317

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           + +      K+     +     D ++        Q LR  G  AE  + S ++F  Q+KY
Sbjct: 318 NQKLEFEPEKKCD---LYIASFDDETSIYAMELVQKLREEGFWAECDI-SGRSFKAQMKY 373

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++      ++ G  E +    ++K ++ G E    + +  S +
Sbjct: 374 ANKIGATYCMVIGGDEMNTKSAKLKRMSDGTETPVTLDDKFSEK 417


>gi|213966123|ref|ZP_03394310.1| histidyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951221|gb|EEB62616.1| histidyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 427

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 102/485 (21%), Positives = 183/485 (37%), Gaps = 72/485 (14%)

Query: 1   MG---KKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           M    K  KL+    P+G  D      R    + +S ++     G++ IE P+ E +   
Sbjct: 1   MNSSQKPKKLKPFSAPKGVPDYVPPVSREFEAVRNSFQHRARLAGYEHIELPIFEETGLF 60

Query: 57  GKFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPV 114
            + + +  D   K +++  D   + ++LR + TA + R V E+       P +    GP 
Sbjct: 61  ARGVGESTDVVTKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLSYAGPF 120

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYH 166
           FR E+   GR+RQ  Q  V+ +G      DAE+  +       +G            D  
Sbjct: 121 FRYERPQAGRYRQLQQVGVEAIGIDDPALDAEVIALADACFRGIGLEGFRLELTSLGDNT 180

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
                R  L   L  + L  + +    +  LR +D          +  + E   D     
Sbjct: 181 CRSEYRAKLQEFLFDLPLDEETRHRANINPLRVLDDK--------RPEMQEMLAD----- 227

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
                       +M+  LS         +  L+                           
Sbjct: 228 ----------APLMLDHLSDSARSHFEAVTGLLDD-----------------------MR 254

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
               I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +
Sbjct: 255 VPYVINPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQEL 306

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
              GF +G+ R ++AL++     ++ + +    +     +  + +        LR AGIR
Sbjct: 307 SGIGFGLGVDRALLALEAESKQASDGRRVDVYGVAL--GEEAAHAMALQI-NKLRQAGIR 363

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A+M  G  +     +K ADR     A++ G  E + G +Q+K+L   ++ +  +      
Sbjct: 364 ADMSYG-GRGLKGAMKGADRAGARFALVLGESELAAGEVQLKNLESHEQHAVALDALVQE 422

Query: 467 REARV 471
            ++R+
Sbjct: 423 LQSRI 427


>gi|166362915|ref|YP_001655188.1| histidyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189082301|sp|B0JRF1|SYH_MICAN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166085288|dbj|BAF99995.1| histidyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 426

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 105/473 (22%), Positives = 187/473 (39%), Gaps = 60/473 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    E+     + ++   I     +  I TP+ E +    + + +  D   
Sbjct: 4   IQAIRGTKDILPAEVGYWQWLEETASRILGTALYQEIRTPIFEQTQLFERGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R   E+         R +  GP+FR E+   GR R
Sbjct: 64  KEMYTFLDRRQRSLTLRPEGTAGVVRAYIEHKLQAAGGVQRLWYKGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEKI 182
           QF Q  V+ +GS    AD E+  + ++ L+AVG++     I       +R+     L   
Sbjct: 124 QFHQIGVELLGSDDPRADVEVITLASEILKAVGLENLKLDINSLGNAQDRQNYRQALLDY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                  L+         D   +     +++L  +              +  E +  ++ 
Sbjct: 184 LTPYKADLDA--------DSQQRLEKNPLRILDSKDEKTK---------IICENVPSILE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L  D +K    +  L+                               ++  +VRGL+YY
Sbjct: 227 HLGSDSQKHFERVQSLLTDLGVI-----------------------YNLNPCLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E         +        +V GGGRYDGL+++  G + PA G++IG+ RLI+ L
Sbjct: 264 THTAFEI--------QSDDLGAQATVCGGGRYDGLIAQLGGLDTPAVGWAIGLERLIILL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +S +  + +        +     + ++  +  Q LR  G   E+ L S   FG Q K
Sbjct: 316 QQKQSLSFLVPD-----FYLVSKGEKAEARSVVLAQQLRGLGFSVELDL-SGSAFGKQFK 369

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            ADR      II G  E   G +Q+K +A  +++S    +  +      AQI+
Sbjct: 370 RADRAKAVGCIILGDAEAENGTVQLKWMATQEQISLTQADLLTQAGELKAQIS 422


>gi|328957464|ref|YP_004374850.1| histidine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673788|gb|AEB29834.1| histidine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 441

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 102/471 (21%), Positives = 178/471 (37%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD   ++ R    + + +  +  +Y F  I TP+ E  D   + + +  D 
Sbjct: 1   MAIQKPKGTADLLPEDSRKWQYVEEILNMVLADYQFGEIRTPIFESYDLFSRGVGETSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + +SLR + TAP+ R   EN         P + Y  GP+FR E+   
Sbjct: 61  VSKEMYDFFDKGERHMSLRPEGTAPVVRAFVENKLFGPEHNKPYKVYYKGPMFRYERPQG 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEK 181
           GR RQF Q  V+  GS+    D E   +     E +G+++    I             E 
Sbjct: 121 GRMRQFHQLGVEVFGSTNPATDVESMALAMALFEELGLEKLTLVINSLGDSESRVAYREA 180

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +  +      E      + D   +     +++L  + + D             +    ++
Sbjct: 181 LIAYLKPHFEEL-----SADSQTRLHKNPLRVLDSKDKKDKE---------IVKNAPSIL 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +LS D  K    + E++                               I S +VRGL+Y
Sbjct: 227 DYLSEDSAKHFETVKEMLTAL-----------------------DIPFVIDSNMVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT  ++E +   P            ++  GGRYDGLV    G   P  GF++G+ RL++ 
Sbjct: 264 YTHTIFEVMSDAPGF------GAITTICAGGRYDGLVEEVGGPATPGFGFALGLERLMMT 317

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L++ E    +I +   V +  +     +  +     Q  R AG+ AE     ++    Q 
Sbjct: 318 LEAEEI---DIPDTHEVDVYVIGLGEATNLESLKIVQAARGAGLSAERDY-MNRKIKGQF 373

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           K A + N  + I  G  E  +  +  K +  G E    +       E    
Sbjct: 374 KTASKLNAKVVITLGDAELEQKEVNFKVMKTGNESKVPLTEVYKDFEKLFN 424


>gi|319892684|ref|YP_004149559.1| Histidyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162380|gb|ADV05923.1| Histidyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 423

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 100/464 (21%), Positives = 180/464 (38%), Gaps = 48/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
             +PRG  D   +E      I + +  + E Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IHIPRGTQDILPEETTKWRYIENQLHKLMEVYNYQEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   EN        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIENKMQGLPNQPVKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K+    I        D        +
Sbjct: 122 RQFNQFGVEAIGAENPSMDAEVLAMVMHIYQSFGLKKLKLVINSVG----DAESRVDYQN 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  + +I     D   +     +++L  +         T            +  FL+
Sbjct: 178 ALREHFQPVIHNYCKDCQQRIKTNPMRILDCKVDRHQPEIQT---------APSITDFLN 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              +     +   +                              ++   +VRGL+YYT  
Sbjct: 229 DYSKDYFEAVKSHLD-----------------------RLGMPYEVDPKLVRGLDYYTHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +     M+ +       ++ GGGRY+GL+    G +    GF++ I RL++AL+  
Sbjct: 266 AFELM-----MDNEAYDGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEE 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                   +M  + +        +          LR AGI  +     S+    Q+K AD
Sbjct: 321 GI---EFPQMQHIDLFVATMGEKADDFAVTLLNRLRHAGISVDKDY-LSRKLKGQMKQAD 376

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           R N    I+ G  E   G + +K +A G+  + + +  ES+   
Sbjct: 377 RLNATYTIVIGDQELEAGEVAVKHMATGESQTMKFEEIESYIHG 420


>gi|209966825|ref|YP_002299740.1| histidyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209960291|gb|ACJ00928.1| histidyl-tRNA synthetasehisS [Rhodospirillum centenum SW]
          Length = 450

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 141/475 (29%), Positives = 212/475 (44%), Gaps = 37/475 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           +    P G  +   +      R+LD+IR  YE +GF P+ETP+ E +D  L K   +   
Sbjct: 4   ITPRTPPGTMELLPRRQIAFQRMLDTIRRGYERFGFLPVETPVFEVADVLLSKSGGET-- 61

Query: 66  PNKGVFSLQ-----DDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             K V+ +Q     +   +  ++LR+DLT PLARYVAE+   + FP R Y++  V+R E+
Sbjct: 62  -EKQVYFVQSTGAIEQGHRPDLALRFDLTVPLARYVAEHERDLAFPFRRYQMQRVYRGER 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F QCD+D +G  +     +  M          +    + I  NNRKIL G+ 
Sbjct: 121 AQKGRYREFYQCDIDVIGKDSLPVVFDAEMPAVIYTIFSELDVGPFRINFNNRKILLGLF 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E +G++  +    R +VLR +DKLDK     V  LL             G  L +     
Sbjct: 181 ESLGINEPE---TRALVLRQVDKLDKLSRDEVVGLLQ----------GDGIGLDAATAGR 227

Query: 240 MVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
           ++  +        ++  L  L   T     G  EL  +   ++  G      +++  I R
Sbjct: 228 VLDMIGFAGPAADTLAHLEGLGVDTPTFRTGLAELSEVVAALKAFGVPETHWRVNLAIAR 287

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYTG VYE  L              GSV  GGRY+ L   +    +P  G SIG++R
Sbjct: 288 GLDYYTGTVYETFLTD--------HPGLGSVCSGGRYENLAGLYTKSKLPGVGISIGLTR 339

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L  AL+     T+       V +     DS  L  Y      LR AGI  E+ L  +K  
Sbjct: 340 LFYALEQAGIVTDGPST---VQVLVTQFDSALLPDYLAIGAELRAAGINTEIQLEPAK-P 395

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             Q  YAD+     A+I G  E++RG + +KD+  G++ +        W   R  
Sbjct: 396 KKQFAYADKAGIRFAVIMGPDEKARGEVTVKDMVSGEQAAVARAGLADWLRTRTG 450


>gi|119719569|ref|YP_920064.1| histidyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524689|gb|ABL78061.1| histidyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 431

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 130/469 (27%), Positives = 222/469 (47%), Gaps = 42/469 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L  + PRG  D   +E   +  + + IR ++E+YG+  + TP  EY D L    
Sbjct: 1   MSKN--LVLQPPRGTRDWLPEEAYAKRIVSEKIREVFESYGYGEVITPAFEYLDLLKAKA 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E    + +++ +D  G+ + LR+++T P+AR VA     +  P R Y + PV+R E+ 
Sbjct: 59  GEE--VVEQIYAFKDKAGRELGLRFEMTTPIARIVASR-LDLAKPLRFYYVQPVWRYEEP 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F Q  ++  G S    DAE+  +  D L+AVG+K  D+ I +N+R++++ ++ 
Sbjct: 116 QRGRWREFWQAGIELFGISEPEGDAEVVAVTFDALKAVGLK--DFDIRVNDRRVVEDLVL 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+ GD         LR +DK+DKFG + V   L +              L  +    +
Sbjct: 174 GAGIPGD----LLPSALRVLDKMDKFGEEYVVSELAK------------LGLREDAATSL 217

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L            ++   T  G +G   L ++ + ++        + +   IVRGL 
Sbjct: 218 LEKLKSGS-------LDIDTSTQPGREGLRRLALVVDTLK--NCYGINVTVDYAIVRGLG 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E         +       GS+ GGGRYD LVS   G  +PA+G +IG+ RL+ 
Sbjct: 269 YYTGFVFEV--------KAGSSEGLGSIAGGGRYDDLVSVVGGPKIPASGMAIGVERLLE 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL    +   + +E+  V +  +    + LS+     + LR AG++  + +   ++    
Sbjct: 321 ALSMQGALKLDYREVD-VCVIPVKKTPEILSEAVAVARELRVAGMKVVLEVSE-RSLSKL 378

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           L+ A +R    AII G  E   G++ ++DL   KE      +   +  A
Sbjct: 379 LEAASKRGARFAIILGERELKEGVVTVRDLYLWKEEKVARPHLYEYIRA 427


>gi|70726291|ref|YP_253205.1| histidyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|83305878|sp|Q4L6X6|SYH_STAHJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|68447015|dbj|BAE04599.1| histidyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 423

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 186/468 (39%), Gaps = 50/468 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
             +PRG  D   ++      I + +  + + Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IRIPRGTQDILPEDSSKWRYIENQLDKLMKLYNYKEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   EN        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIENKMQGIPNQPVKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    E+ G+K     I  I +        E +  
Sbjct: 122 RQFTQFGVEAIGAENPSMDAEVLAMVMHIYESFGLKHLKLVINSIGDADSRKEYNEALIR 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +      +I     D   +     +++L  +   D             +    +  +L
Sbjct: 182 HFE-----PVIDTFCDDCKSRLHTNPMRILDCKIDRDKE---------AVKNAPRITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + D +   +E+   +                                   +VRGL+YYT 
Sbjct: 228 NDDSKAYFNEVKTHLDDL-----------------------GISYVEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G N    GF++ I RL++   +
Sbjct: 265 TAFELMMDNPNYD-----GAITTLCGGGRYNGLLELLDGPNQTGIGFALSIERLLL---A 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           LE     +       +  +    ++          LR +GI+A+      +    Q+K A
Sbjct: 317 LEEEGIELDVEDTFDLFIVTMGEEAERYSVKLLNQLRKSGIKADKDY-LQRKVKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           DR N    ++ G  E    ++ +KD++ G+  +  + N  ++ + +  
Sbjct: 376 DRLNAQYTVVIGDQELENEVIDVKDMSTGETETINLNNLVNYFQEKNN 423


>gi|326692515|ref|ZP_08229520.1| histidyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 434

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 185/468 (39%), Gaps = 55/468 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T    + P+G AD   ++      + +  R ++ +Y F  + TPL E  +   +  
Sbjct: 1   MAKAT---FQRPKGTADLLPEQTAQWQYVENLARVLFGDYNFKEVRTPLFENFEVFSRSA 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFR 116
            D  D   K ++   D   + ++LR + TA + R   EN         P + + IGP+FR
Sbjct: 58  GDTSDVVTKEMYDFHDKGDRHVALRPEGTAGIVRAFVENKLYGPEFDKPYKAFYIGPMFR 117

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY-HIGINNRKIL 175
            E+   GRFRQF Q   +  GSS+   D E+  M+ +  + +G+         + ++   
Sbjct: 118 YERPQAGRFRQFHQIGAEAFGSSSPALDVEIIAMLINFFQTLGLDNLKVAINSLGDKATR 177

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           D   + +  +     +E      + D   +     +++L  +   D              
Sbjct: 178 DAYRQALIDYLKPHFDEL-----SADSQARLEKNPLRVLDSKDPRDQVF---------VA 223

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
              +++ +LS + +    ++  L+                              ++  T+
Sbjct: 224 DAPVILDYLSDEAKAHWEKVQALLTAL-----------------------DIPFEVDPTM 260

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   ++E +     +          ++ GGGRY GLVS F G   P  GF IG+
Sbjct: 261 VRGLDYYNDTIFEIMTVDDTLKGAA------TIAGGGRYSGLVSEFGGPETPGVGFGIGV 314

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RL+  L++        + +       ++   D+        Q +R  G  AE      +
Sbjct: 315 ERLVSLLEAKGLKPIEPEGLD---FYVVNIGDDTEVAAMQIVQAIRGFGYVAERDY-LGR 370

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +   Q K ADR      +  G  E +  + +IK++A G++ + ++ + 
Sbjct: 371 SAKAQFKSADRYQSKYVVTIGEQELADHVAKIKNMATGQQQTVKLADL 418


>gi|284929416|ref|YP_003421938.1| histidyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809860|gb|ADB95557.1| histidyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 432

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 104/473 (21%), Positives = 188/473 (39%), Gaps = 60/473 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
                 G  D   +EI     +  +   I     +  I +P+ E +    + + +  D  
Sbjct: 3   TISTLPGTRDILPEEIGYWQYVEATAAKILGRAMYREIRSPIFENTSLFERGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRF 125
           +K +++  D   + ++LR + TA +AR   +N    +    R +  GP+FR E+   GR 
Sbjct: 63  SKEMYTFPDRSDRLVTLRPEGTAGVARAYLQNNLHSLGGVQRLWYSGPMFRYERPQAGRQ 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEK 181
           RQF Q  ++ +G+    AD E+  +  D L+ +G+K+   +I      N+R +    L  
Sbjct: 123 RQFHQIGLELIGARDPRADVEVIALATDVLKFLGLKQLKLNINSIGDKNDRNLYREALIN 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             L   + L+        ID  ++     +++L  +                ++    ++
Sbjct: 183 YFLSHKEDLD--------IDSQNRLLKNPLRILDSKNEKTKE---------INKNAPNIL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  + +K   E+ +L+                          +   +I+  +VRGL+Y
Sbjct: 226 HFLGKESQKHFDEVQQLLTDL-----------------------NINYQINPCLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E         +        +V GGGRYD L+    G + PA G++IG+ RLI+ 
Sbjct: 263 YTHTAFEI--------QSDNLGTQSTVCGGGRYDHLIEELGGTSTPAVGWAIGVERLIML 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           LK +E             +  +     + +      Q LR+  +  E+ + S  NFG Q 
Sbjct: 315 LKQIE-----CSPQHNPDVYIVSKGKKAEAIGLYLAQKLRSEELIVELDM-SGSNFGKQF 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           K ADR    + I+ G  E     LQ+K L   ++ S    +  +       QI
Sbjct: 369 KRADRSKASVCIVLGEEEAENNTLQVKWLHTKEQNSMTQVDLLNHITEFKKQI 421


>gi|167856483|ref|ZP_02479199.1| histidyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167852392|gb|EDS23690.1| histidyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 429

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 108/500 (21%), Positives = 194/500 (38%), Gaps = 81/500 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  +   +  +IR+I+ +YG+  + +P++E +D   + +
Sbjct: 1   MSK----TIQALRGMNDLSPTETPLWQWVESNIRDIFASYGYTEMRSPIMESTDLFKRGV 56

Query: 61  PD-EDRPNKGVFSLQ--DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
            +  D   K +F+    ++ G+  +LR + TA   R   E+        R + IGP+FR 
Sbjct: 57  GEATDIVEKEMFTFTRSEEAGESFTLRPEGTAGCVRAAIEHGWIYNQEQRLWYIGPMFRY 116

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNR 172
           E+   GR+RQF Q  V+  G     ADAE+ ++ A   E +GI+ +     +   G+  R
Sbjct: 117 ERPQKGRYRQFHQAGVEIFGIPNAEADAELIVLTARLWEKLGIREHVTLQLNSIGGLEVR 176

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
                 L     +  D L +        D   +     +++L  + +             
Sbjct: 177 TRYREALVAFLQNHLDVLKQD------PDSERRLTTNPLRILDTKNQA---------LQA 221

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
                  +  FL  + +     L  ++       +   +L                    
Sbjct: 222 VLNDAPKLHDFLDDESKAHFARLCAILDEMGIAYEVNQKL-------------------- 261

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
              VRGL+YY   V+E +               G+V GGGRYDGLV++  G      GF+
Sbjct: 262 ---VRGLDYYNKTVFEWVTTA--------LGAQGTVCGGGRYDGLVAQLGGHATEGVGFA 310

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMF 410
           +G+ RL++ ++ +     N++    V I  +     + +      + LR A   +R  M 
Sbjct: 311 MGLERLVLLVQEVN---PNVQLPRAVDIYVVHSGEGTTAVAFRLAETLRNAFPQLRT-ML 366

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             S  NF  Q K AD+    +A++ G  E +   + +KDL                    
Sbjct: 367 HTSGGNFKKQFKRADKSGAKIALVLGESEVAEQKVVVKDL-----------------FGE 409

Query: 471 VAQITIPISELVSTVKKILQ 490
             Q+TI  ++L++ +     
Sbjct: 410 AEQMTIAQADLINELTTRFA 429


>gi|91784206|ref|YP_559412.1| histidyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123168325|sp|Q13X29|SYH_BURXL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|91688160|gb|ABE31360.1| histidyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 446

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 103/506 (20%), Positives = 197/506 (38%), Gaps = 80/506 (15%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK   +    +G  D   +E  +      +++++  +YG+  I TP++E++    + + +
Sbjct: 5   KKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIIEHTQLFKRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--------YHIGINNR 172
             GR+RQF Q  V+ +G +   ADAE+ MM     + +G+             H    +R
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLELNSLGLAHERAAHR 184

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
             L   LEK     D++   RL                +++L  +               
Sbjct: 185 VELIAYLEKHMDVLDEEAKRRLYT------------NPLRVLDTKNPAMQE--------- 223

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
            ++    ++ FL  +       L  ++K                         +    I+
Sbjct: 224 VAQNAPKLIDFLGEESRAHFEGLQRILKAN-----------------------NIPFTIN 260

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
             +VRGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G++
Sbjct: 261 QRLVRGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWA 312

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           +GI R++  LK  +       E     +  +     +  +  +  + LR  G+   +   
Sbjct: 313 MGIERILELLKEEQLVP----EDEGCDVYVVHQGEAAREQAFIIAERLRDTGLDVILHCS 368

Query: 413 SSK---NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +     +F +Q+K AD      A++ G  E + G + +K L              +    
Sbjct: 369 ADGQTASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRD-----------TNADGG 417

Query: 470 RVAQITIPISELVSTVKKILQENKEE 495
           +  Q  +P  +L   +   +    E+
Sbjct: 418 KNEQHNVPAEDLTEFLINAMVATAED 443


>gi|56751844|ref|YP_172545.1| histidyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81676835|sp|Q5N0Z5|SYH_SYNP6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|56686803|dbj|BAD80025.1| histidyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 435

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 106/488 (21%), Positives = 192/488 (39%), Gaps = 72/488 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    E ++   I  + R I        + TP+ E +    + + +  D   
Sbjct: 4   LQALRGTRDILPPETQVWQWIEQTAREILGRAAVQEVRTPIFEQTALFERGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++S +D   + ++LR + TA   R   E+   +     R    GP+FR E+   GR R
Sbjct: 64  KEMYSFRDRGDRSLTLRPEGTAGTVRAYIEHGLASQGGVQRLRYTGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILDGI 178
           QF Q  ++ +G++   ADAE   +    L+A+G+K          D       R+ L   
Sbjct: 124 QFHQLGLELLGTADARADAEAIALATQILQALGLKNLRLDLNSVGDACDRAAYRQALVDY 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L       D             D  D+     +++L  +     +            +  
Sbjct: 184 LTPYAADLD------------PDSRDRLERNPLRILDSKDERTQA---------IVAEAP 222

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +LS    +   ++ +L+                        +     ++   +VRG
Sbjct: 223 SLHDYLSERSRQLFEQVQQLLT-----------------------HLGIDYRLEPKLVRG 259

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E I                +V GGGRYDGLVS+  G   PA G+++G+ RL
Sbjct: 260 LDYYTHTAFEII--------SSDLGAQATVCGGGRYDGLVSQLGGPETPAVGWAMGLERL 311

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+  ++          +    +   + +  +  +  Q LR+AG   E+ L S   FG
Sbjct: 312 VLLLQQGQAVP-----PATLDFYLVSRGAIAEGQALILAQKLRSAGFGVELDL-SGSAFG 365

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE----IKNNESWREARVAQI 474
            Q K ADR      ++ G  E  +G + +K L  G++ + +    +++++ WR    A  
Sbjct: 366 KQFKRADRSGAIACLVLGDAEAEQGQVNLKWLQSGEQQTLDQSELLQDSDHWRSRLQAAR 425

Query: 475 TIPISELV 482
           T+   E+ 
Sbjct: 426 TVSPVEVA 433


>gi|95931408|ref|ZP_01314117.1| histidyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95132545|gb|EAT14235.1| histidyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 424

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 95/465 (20%), Positives = 180/465 (38%), Gaps = 55/465 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +     +G  D    EI     + D+ R I+  YG   I  P++E ++   + + +  D 
Sbjct: 1   MSITGIKGMNDILPSEIATWQFLEDTARRIFATYGCQEIRVPVVEKTELFCRSIGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D     ++LR + TAP+ R   ++         + Y +GP+FR E+   GR
Sbjct: 61  VEKEMYTFNDKSDNSLTLRPEGTAPVMRSFIQHKLFNQDQVSKLYYLGPMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           +RQF Q   + +G      DA++  M++   EAVG+         +   K      + + 
Sbjct: 121 YRQFHQIGAEIIGIDDPRMDAQVLAMLSHYFEAVGLTDVSLQINSLGCPKCRPDYRQTLI 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                +L++        D   ++    +++L  + ++             ++    ++  
Sbjct: 181 DFLQQRLDQL-----CPDCQRRYATNPLRVLDCKSKS---------CKEATQDAPSVLDH 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  + +     + + +          N +                       VRGL+YYT
Sbjct: 227 LCDECDTHFATVQQCLNQLGTAYSINNRM-----------------------VRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                +V  GGRYDGLV    G ++P  GF++G+ RL++ L+
Sbjct: 264 KTTFEMVTN--------NLGAQNAVAAGGRYDGLVEELGGPSLPGIGFAMGVERLVLLLQ 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             +  T          +       D+          L+  GI AEM   + ++   QL+ 
Sbjct: 316 DKKIKTPPPA------LFLATLGKDAEEFAFKVLHQLQREGIYAEMDF-TGRSLKAQLRR 368

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           AD+ NC   I+ G  E S G  Q+K +A G + + ++        
Sbjct: 369 ADKLNCRYTIMIGDNELSEGSAQLKRMADGDQQAVQLSQLLEQLR 413


>gi|323128235|gb|ADX25532.1| histidyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 426

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 97/471 (20%), Positives = 174/471 (36%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    +      +    R+ +  Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MAFQKPKGTQDILPGDAAKWQYVEYVARDTFSQYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  G++    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGAANPATDVETIAMAYHFFEKLGIKDVTLHLNSLGSPESRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + ++L    + D   +     +++L  + + D          L  E+   ++ 
Sbjct: 181 LIDYLTPMRDQL----SKDSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     +  +++                              I + +VRGL+YY
Sbjct: 228 YLDEESQAHFEAVKAMLEAL-----------------------DIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I      +         ++  GGRYD LV  F G   P  GF +G+ RL++ +
Sbjct: 265 NHTIFEFITSVEGSD--------LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMII 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +     EM    +        + SK     Q +R  G  AE      +    Q K
Sbjct: 317 EKQGITLPIETEMD---VYLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     L +  G  E   G   IK+    +EL    ++  +       Q
Sbjct: 373 SADTFKAKLVMTLGESEVEAGKAVIKNNRSRQELEVSFEDIMTNFANVSEQ 423


>gi|310658605|ref|YP_003936326.1| histidyl tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308825383|emb|CBH21421.1| histidyl tRNA synthetase [Clostridium sticklandii]
          Length = 420

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 100/465 (21%), Positives = 179/465 (38%), Gaps = 49/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   K+I   N +    + +  ++G+  I TP  EY++   + + D  D 
Sbjct: 1   MDIKRPRGTQDVLPKDINKWNYVETLFKKVCSDFGYGEIRTPDFEYTELFKRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
             K +F+ +    + I+L+ + TAP+ R   EN       P + + I P FR EK   GR
Sbjct: 61  VQKEMFTFEAKSKESITLKPEGTAPVVRAYIENKLYADPQPSKFFYITPCFRYEKPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R F Q  ++  G+ + +ADAE+  +  +    +                          
Sbjct: 121 LRAFHQFGIEIFGTDSSSADAEVISLAVEFFRRL-------------------------- 154

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                  +  I LR          +    +L +    N  +  +      E+  + +   
Sbjct: 155 -----EIDDKIELRINSVGTLESRKEYNKILRDYLKPNYDNLCQTCKDRFEKNPMRIIDC 209

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +  K +     L+   +  E+       + + +     +     I   IVRGL+YYT 
Sbjct: 210 KNETCKEISHDAPLMINHL-DEESKLHFEKLKKYLTAMKID---YTIDPHIVRGLDYYTK 265

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +                +V GGGRYDGL+    G  +P  GF +GI RLI+ L +
Sbjct: 266 SAFEFVSND--------IGSQSTVCGGGRYDGLIEELGGPKIPGVGFGLGIERLILLLDN 317

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           LE   N    +    +        +  +       LR  GI  E      K+   Q KYA
Sbjct: 318 LEKDINQQPSLD---VFIASMGEAAEIEAFKILYDLRKVGISCEKDH-VGKSIKAQFKYA 373

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           D+ N    I+ G  E +  ++ +KD++   +   ++ +  ++ + 
Sbjct: 374 DKLNSRFTIVLGDDEINNQIVTVKDMSNSTQTQIKLDDIVNYFKN 418


>gi|193213734|ref|YP_001994933.1| histidyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|259511939|sp|B3QS95|SYH_CHLT3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|193087211|gb|ACF12486.1| histidyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 427

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 97/471 (20%), Positives = 188/471 (39%), Gaps = 51/471 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ +  +G  D    EI   + + +++R +++ +G++ I TP+ E +    + + +  D 
Sbjct: 1   MKFQTIKGTKDILPSEIHKWHYVENTVRGVFQRFGYNEIRTPVFEQTALFQRGIGETTDI 60

Query: 66  PNKGVFSLQ-DDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
             K ++S Q D + + ++LR ++TAP+ R   ++  +   P  + + I  +FR E+   G
Sbjct: 61  VGKEMYSFQPDPESESLTLRPEMTAPVMRAYLQHSLSGTSPATKVFYISEIFRKERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF Q   + +GS    ADAE+ ++M +    +GIK     +         G  E   
Sbjct: 121 RQRQFWQFGCECIGSDQPEADAEVILLMTEIYRQLGIKNFTLRLNSL------GETESRL 174

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            H +            +D++ K   +   L + + +     +   GA         +  F
Sbjct: 175 AHREALQTYLKPHFDLLDEISKTRFEKNPLRILDSKNPALAEIIAGA-------PHITEF 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L    +     +   +K                              +  T+VRGL+YY+
Sbjct: 228 LDDASKAHFQTVQTYLKNAGLD-----------------------FTVDPTLVRGLDYYS 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP-ATGFSIGISRLIVAL 362
              +E +                ++ GGGRYD L +    +N   A GF+ GI RL++ +
Sbjct: 265 RTAFELVSTD--------LGAQDALAGGGRYDSLATVLGAKNSSAAVGFAAGIERLLIIM 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L+     +     + I T      +          LRT GI   + L   ++   Q++
Sbjct: 317 EKLDLFQAVLPPAPLLFIAT--QSPVAKEWAFQTVNRLRTEGIHVALDL-LGRSLKAQMR 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            A+R +    +I G  E S G  Q+K L   +++     +  +  +    Q
Sbjct: 374 EANRTHAKYVLIVGEEELSTGRFQLKHLQTSEQVELSEADIFTKMQTETTQ 424


>gi|15605705|ref|NP_213082.1| histidyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|7674344|sp|O66522|SYH_AQUAE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|2982856|gb|AAC06477.1| histidyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 403

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 101/460 (21%), Positives = 183/460 (39%), Gaps = 60/460 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  RGF D   K+ +   +I D+ R I + Y F+ I  P++EY++   + + +  D 
Sbjct: 1   MNIQSVRGFHDILGKDAKKFRKISDTARKILKLYNFEEIILPVVEYAELFQRSVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +F  +D  G+ ++LR + TA   R   ++    +    + +  GP+FR E+   GR
Sbjct: 61  VQKEMFVFEDRKGRKLALRPEGTAGTVRAFIQHKLYALRPYVKLFYEGPMFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIG 183
           +RQF Q   +  G +   ADAE+  ++ D L+A+GIK     I     +K  +   E + 
Sbjct: 121 YRQFHQIGAEVFGVAEPHADAEIIKIVYDILQALGIKGVVVEINSLGCKKDREAYREALL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        +      D + +     +++L  +          +   +   +   M+ F
Sbjct: 181 NYL-----TGVKEELCSDCISRMDRNPLRVLDCK---------VETCKVAVREAPKMIDF 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +  +   +L   +K                             + +  +VRGL+YYT
Sbjct: 227 LCDECREHYEKLKNYLKAL-----------------------DIPFRENYNLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+EA+     +          ++  GGRYD LV    G   PA GF++G+ RL++ L 
Sbjct: 264 RTVFEAVSDELGL----------TLIAGGRYDYLVEELGGPPTPALGFALGVERLMLLLP 313

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E             +  +    D          +LR  G   E           QL++
Sbjct: 314 DEEEKEE---------VYFVIPFGDVHEYALRVADILRKKGKVVEYSYRKGG-LKKQLEF 363

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           AD+     A+I G  E     + IKD+  G++   ++   
Sbjct: 364 ADKLGVKYAVIIGEDEVKNQEVTIKDMETGEQRRVKLSEL 403


>gi|329116293|ref|ZP_08245010.1| histidine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326906698|gb|EGE53612.1| histidine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 436

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 101/462 (21%), Positives = 174/462 (37%), Gaps = 52/462 (11%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           +++ + P+G  D    E      +    R  ++ Y +  I TP+ E+ + + + + D  D
Sbjct: 11  QMKLQKPKGTQDILPAEAAKWQYVEHVARETFKKYNYGEIRTPMFEHYEVISRSVGDTTD 70

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHG 121
             +K ++   D  G+ I+LR + TAP+ R   EN      +  P + Y I P+FR E+  
Sbjct: 71  IVSKEMYDFNDKGGRHITLRPEGTAPVVRSYVENKLFAPEVQKPLKMYYIEPMFRYERPQ 130

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR RQF Q  V+  GS+    D E   M  D   A+GI      I             +
Sbjct: 131 AGRLRQFHQIGVECFGSANPAIDVETIAMAYDLFNALGIGNLKLSINSLGNPSSRAAYRQ 190

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             +       ++L    + D   +     +++L  + + D             +    ++
Sbjct: 191 ALIDFLTPQKDKL----SKDSQRRLEENPLRVLDSKEKEDIE---------AVKNAPSIL 237

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  + +     + +++                               I + +VRGL+Y
Sbjct: 238 EFLDEESQAHFDGVRDMLD-----------------------MLGISYTIDTNMVRGLDY 274

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   ++E I                +V GGGRYDGLV+ F G    A GF +G+ RL++ 
Sbjct: 275 YNHTIFEVITEIEDSE--------LTVCGGGRYDGLVTYFDGPETAAFGFGLGLERLLMI 326

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++ L       + +   +         + SK     Q +R  G +AE      +    Q 
Sbjct: 327 IEKLGIELPIEENLDLYMAVL---GDGANSKALELVQAIRRQGFKAERDY-LGRKIKAQF 382

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           K AD       I  G  E   G + IK+    +EL    +  
Sbjct: 383 KSADVFKAKAIITLGESEVEAGKVTIKNNQTRQELEVTFEEL 424


>gi|238504130|ref|XP_002383297.1| histidyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           flavus NRRL3357]
 gi|220690768|gb|EED47117.1| histidyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           flavus NRRL3357]
          Length = 600

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 121/535 (22%), Positives = 211/535 (39%), Gaps = 71/535 (13%)

Query: 1   MGK-KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           MGK K     + P+G  D    +  +R+RI  +I ++++ +G   ++TP+ E  + L   
Sbjct: 79  MGKEKNNFNLKTPKGTKDWSGSDALLRDRIFTTIADVFKRHGGTALDTPVFELREILAGK 138

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                   
Sbjct: 139 YGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRSMKRYHIAKVYRRDQPA 195

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR R+F QCD D  G+          + +   +      +  Y I IN+RKILDG+ 
Sbjct: 196 VSKGRMREFYQCDFDVAGTFDPMVPDAEVLKIVTEVFEELGWQGRYSIKINHRKILDGVF 255

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E  G+  D    +   +  A+DKLDK     V+  + E              L     D 
Sbjct: 256 EVCGVPAD----KIRPISSAVDKLDKMPWADVRKEMVEE-----------KGLDGAVADK 300

Query: 240 MVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           + +++     + + E     E +    + + G  ++ ++ + +   G   +RI    ++ 
Sbjct: 301 IETYVVKKGTRDLLETLLKDEALLANASAKAGLEDMGLLMDYLEAFGVL-DRISFDMSLA 359

Query: 297 RGLEYYTGCVYEAIL-----------------------------GFPVMNEKQKPVVFGS 327
           RGL+YYTG +YE +                                         +  GS
Sbjct: 360 RGLDYYTGVIYEVVTEGSAPAVSSSAPEAEKLQKSGKKSKSKGNADDDDRSNDPTLGVGS 419

Query: 328 VGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVA----LKSLESSTNNIKEMGPVLITT 382
           V  GGRYD LV  F     +P  G S G+ R+       L+  +S+           +  
Sbjct: 420 VAAGGRYDNLVGMFLPKAQIPCVGVSFGVDRIFSITKARLEREKSAEALRSSEVDAFVMA 479

Query: 383 MDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
                    L +     Q L  AG++AE           Q K A++   P A+I G  E 
Sbjct: 480 FGGKGFTGMLKERMNVCQTLWNAGVKAEFSYKVKPKLPQQFKAAEQGGVPFAVILGEDEL 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           + G ++IK++         +++    +E     + + ++ L + VK  +   +++
Sbjct: 540 AEGKVRIKEM--------GLEDGHPEKEG----VLVDLASLPAEVKARVARKRDQ 582


>gi|307181811|gb|EFN69254.1| Histidyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 498

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 117/491 (23%), Positives = 213/491 (43%), Gaps = 49/491 (9%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           KL  + P+G  D   +++ +R  +L+ I ++++ +G + I+TP+ E  D L     ++  
Sbjct: 53  KLILKTPKGTRDYNPEQMALRLGVLEKIISVFKRHGAETIDTPVFELKDVLTGKYGED-- 110

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +K ++ L+D  G+ ++LRYDLT P ARY+A N  + +             N     GR+
Sbjct: 111 -SKLIYDLKDQGGEILALRYDLTVPFARYLAMNKISSIKRYHIA-KVYRRDNPATTKGRY 168

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F QCD D  G          C+ +      + +    Y I +N+R +LDGI    G+ 
Sbjct: 169 REFYQCDFDIAGQYDPMLPDAECIRVMSEALQM-LDLESYLIKVNHRSLLDGIFAACGVP 227

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 +   +  A+DKLDK   + VK  + E              L     D + +++S
Sbjct: 228 QS----KFRSICSAVDKLDKSPWEEVKKEMIEE-----------KGLDEHIADKIGNYVS 272

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS--NRIKISSTIVRGLEYYT 303
                 +       K  +        L  +  L++        ++IK   ++ RGL+YYT
Sbjct: 273 QSGGIELITELRKDKELMRQSAAVQGLDSMELLLKYCSIYKVLDKIKFDLSLARGLDYYT 332

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVA 361
           G +YEA+L    ++        GS+ GGGRYD L  +   K +NVP  G S+G+ R+   
Sbjct: 333 GVIYEAVLCGDGID-------VGSIAGGGRYDNLVGMFDNKNKNVPCVGVSLGVERIFSV 385

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L++  ++         + +       +           L  AG++AE     +     QL
Sbjct: 386 LEARLANKGLKTRTNEIEVFVASAQKNLHEPRMKILVDLWEAGVKAEQSYKKNAKLLAQL 445

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           ++ +    PLAII G  E ++G + ++ ++  +E+                   +  S L
Sbjct: 446 QHCEENKIPLAIIIGESELAKGEVTLRIVSSREEI------------------RVSRSNL 487

Query: 482 VSTVKKILQEN 492
           +  ++K+L+ +
Sbjct: 488 IEEIRKLLKTS 498


>gi|296117805|ref|ZP_06836388.1| histidine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969036|gb|EFG82278.1| histidine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 427

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 101/468 (21%), Positives = 183/468 (39%), Gaps = 52/468 (11%)

Query: 1   MGKKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K + +A + P+G  D    +    + +  ++       G+  IE P+ E +    + 
Sbjct: 1   MSDKKQFQALKAPKGVPDYVPPQSATFDAVRSTLVGQAYLAGYSHIELPVFEDTTLFARG 60

Query: 60  LPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRN 117
           + +  D  +K +++  D   + ++LR + TA + R V ++       P +    GP FR 
Sbjct: 61  VGESTDVVSKEMYTFADRGERSVTLRPEGTAGVMRAVIQHNLDRGQLPVKLAYYGPFFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q  V+ +G      DAE+  +      A+G+      +          
Sbjct: 121 ERPQAGRYRQLQQVGVEAIGVDDPALDAEVVALADRGYRALGLSEFRLEMTSLGCGN--- 177

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
                     +KL E L  L   D+  +   +   L + + +     + T  A L     
Sbjct: 178 ----CRPAYREKLQEFLFSLDL-DEETRHRAEINPLRVLDDKRPEMQEATADAPL----- 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             M+ +L  D  +    +  L+                              +I+  +VR
Sbjct: 228 --MLDYLCEDCREHFETVKSLLND-----------------------MQVPFEINPRMVR 262

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYT   +E +                 +GGGGRYDGL+++  GQ++   GF +G+ R
Sbjct: 263 GLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLSGIGFGLGVDR 314

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
            ++AL++   S   ++E   V    +  ++    K       LR AGI  +M  G  +  
Sbjct: 315 AVLALEAEGKSIPVVEERAAVYGVALGGEAK--KKMVSIVNDLRLAGISTDMSYG-DRGL 371

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              +K ADR     A++ G  E   G + +KDL   ++    + N   
Sbjct: 372 KGAMKGADRAGARFALVLGDQELENGTVALKDLVAHEQEDIALDNIVE 419


>gi|229549690|ref|ZP_04438415.1| histidyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972388|ref|ZP_05422974.1| histidyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|312951289|ref|ZP_07770190.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305170|gb|EEN71166.1| histidyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255963406|gb|EET95882.1| histidyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|310630725|gb|EFQ14008.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315152595|gb|EFT96611.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315159885|gb|EFU03902.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 433

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 95/471 (20%), Positives = 189/471 (40%), Gaps = 50/471 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + ++ R I+++Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQKPKGTNDILPGTSEKWQFVEETARLIFKDYQYQEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   EN         P +TY +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVENKLYGPEYTKPYKTYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS     D E+  M  D  + +GI++    I     K       + 
Sbjct: 121 GRLRQFHQIGVEAFGSENPALDVEIMAMALDFFKQLGIQQIKLVINSLGDKETRATYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +     L    + D   +     +++L  + + D          +   +   ++ 
Sbjct: 181 LIDYLEPHMAEL----SEDSQRRLHENPLRVLDSKDKKDK---------VIVAEAPSILE 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+   +     + +++       +  + +                       VRGL+YY
Sbjct: 228 YLNEPSKAHFEAVTDMLDLLEIPYEIDSNM-----------------------VRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E       M+E  K     ++  GGRY+GLV    G + P  GF +GI R+++ +
Sbjct: 265 THTIFEI------MSEAPKMGAQSTICAGGRYNGLVEELGGPDTPGFGFGMGIERVLLTM 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ E     + E+       +   S++        Q +R  G  A+     ++    Q K
Sbjct: 319 EAEEVVIPALSELDA---YVVGIGSETNVAALQLVQSIRNFGFSADRDY-MNRKPKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD+    L +  G  E + G++ +K +A  +E +  +       +    +
Sbjct: 375 TADKLQAKLVLTIGENELNEGIVNVKSMATREEKAFPLSTIHDSFDEVYDE 425


>gi|310643536|ref|YP_003948294.1| histidyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309248486|gb|ADO58053.1| Histidyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 414

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 171/463 (36%), Gaps = 52/463 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P G  D     +     + +  R I   + +  I TP+ E ++   + + +  D 
Sbjct: 1   MAFQKPTGTQDLLPGSVEKWQVVEEKAREISRRFNYREIRTPMFEQTNLFVRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + ++LR + TA + R   EN         + Y IGP+FR E+   GR
Sbjct: 61  VEKEMYTFEDKGKRSMTLRPEGTAGVVRSYVENKLYGEPDVTKLYYIGPMFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q  ++  G+     DAE+          +G+K     I                 
Sbjct: 121 QRQFHQFGIEAFGAMDPALDAEVIAFGYQFCRELGLKGVQVEINSVGNAASRA---AYRQ 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H  D L      L   +   +     +++L  +   D  G    GA    + +D      
Sbjct: 178 HLVDFLMPIKDTL-TKESQARIERNPLRVLDSKDDQDKFG----GAPSILDSLD------ 226

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                                E+       + + +   G       ++  +VRGL+YYT 
Sbjct: 227 ---------------------EESSTHFEKVKQNLDAMG---VEYTVNPRLVRGLDYYTL 262

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E         + +      ++GGGGRY+GLV    G + P  GF IG+ R+ + L+ 
Sbjct: 263 TAFEF--------KAEGIGAIDTIGGGGRYNGLVGDLGGPDQPGIGFGIGLERIQLILEH 314

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                N  K +   ++        + ++       LR AG  AE      +    Q+K A
Sbjct: 315 QGVKLNEAKPLDIYMV---ALGEAAETEVTKQLFKLRQAGFSAERDY-LGRKMKAQMKSA 370

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           DR       I G  E  +G + +K++  G++ + ++       
Sbjct: 371 DRFKARYTAILGDDELVKGEIALKNMETGEQRTVKLDQLVEEL 413


>gi|257419652|ref|ZP_05596646.1| histidyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257161480|gb|EEU91440.1| histidyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 433

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 96/459 (20%), Positives = 187/459 (40%), Gaps = 50/459 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + ++ R I+++Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQKPKGTNDILPGTSEKWQFVEETARLIFKDYQYQEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   EN         P +TY +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVENKLYGPEYTKPYKTYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS     D E+  M  D  + +GI++    I     K       + 
Sbjct: 121 GRLRQFHQIGVEAFGSENPALDVEIMAMALDFFKQLGIQQIKLVINSLGDKETRATYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +     L    + D   +     +++L  + + D          +   +   ++ 
Sbjct: 181 LIDYLEPHMAEL----SEDSQRRLHENPLRVLDSKDKKDK---------VIVAEAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+   +     + +++       +  + +                       VRGL+YY
Sbjct: 228 YLNEPSKAHFEAVTDMLDLLEIPYEIDSNM-----------------------VRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E       M+E  K     ++  GGRY+GLV    G + P  GF +GI R+++ +
Sbjct: 265 THTIFEI------MSEAPKMGAQSTICAGGRYNGLVEELGGPDTPGFGFGMGIERVLLTM 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ E     + E+       +   SD+        Q +R  G  A+     ++    Q K
Sbjct: 319 EAEEVVIPALSELDA---YVVGIGSDTNVAALQLVQSIRNFGFSADRDY-MNRKPKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD+    L +  G  E + G++ +K +A  +E +  + 
Sbjct: 375 TADKLQAKLVLTIGENELNEGIVNVKSMATREEKAFPLS 413


>gi|159903269|ref|YP_001550613.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|229558704|sp|A9B9Z7|SYH_PROM4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|159888445|gb|ABX08659.1| Histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 423

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 101/445 (22%), Positives = 184/445 (41%), Gaps = 52/445 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    + +    + +  R+ +   G   I TPLLE ++   + + +  D   
Sbjct: 4   FQTLRGMVDLLPMQTQRWQIVENLARHHFHRAGLKEIRTPLLEITELFARGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++  D   +  +LR + TA + R V ++      P R +  GP+FR E+   GR RQ
Sbjct: 64  KEMYTFLDRGDRSCTLRPEGTASVVRSVVQHGLLNQGPQRLWYGGPMFRYERPQAGRQRQ 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+  G  +  ADAE+  +  D L+ +G+K     +         G  E    +  
Sbjct: 124 FHQMGVEFFGLPSIHADAELISIAWDLLQDLGLKDLKLELNSL------GTFEDRQNYHA 177

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                     + +DK  +  +    L + + +  ++ +  K A L ++ +  +     + 
Sbjct: 178 RLNEWLECNFKLLDKDSQDRIHKNPLRILDTKNQSTQELLKDAPLLTDYLSDLSKERFLC 237

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           L++++H+L                                   ++  +VRGL+YY    +
Sbjct: 238 LQEALHKLK------------------------------IPFDLNHNLVRGLDYYCHTAF 267

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E            +     +V GGGRYD LV +  G + P+ G++IG+ RLI+ L+    
Sbjct: 268 EIT--------SSQLGAQATVCGGGRYDRLVKQLGGPDTPSIGWAIGMERLIILLED--- 316

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              +I +   V +  ++       +    T+ LR   I  E+    + NF  Q K A+R 
Sbjct: 317 ---SIHKEQFVDVYFINRGELPAIEALSLTRKLRAFNIIVELDHSQA-NFSKQFKRANRS 372

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAK 452
           N   AII G  E ++G +++K L  
Sbjct: 373 NAKWAIIMGEDEIAKGEIRLKRLTS 397


>gi|256847119|ref|ZP_05552565.1| histidyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715783|gb|EEU30758.1| histidyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 430

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 97/475 (20%), Positives = 177/475 (37%), Gaps = 57/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +R + P+G AD    +      +    R I+  YG+  I TPL E  D   +   D  D 
Sbjct: 1   MRYQRPKGTADILPGDSAKWEYVEKLARKIFHQYGYQGIRTPLFESYDIFARSAGDTSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHIALRPEGTAGVVRAFNENKLYGPEYPKPYKVYYVGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR R+F Q  V+  GS     D E+  M       +G+       +      +R      
Sbjct: 121 GRQREFHQIGVEAFGSDNPATDVEVIAMALQLFTKLGLTDLRVAVNTLGDQKSRDDYRTA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D  ++     +++L  +   D                 
Sbjct: 181 LINYLKPHYDELSE--------DSQERLEKNPLRVLDSKDPRDQKF---------VADAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ +      ++ +++                               +   +VRG
Sbjct: 224 SILDYLTPEANARFEQVKQMLD-----------------------VLGIDYVVDPDMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E ++    +          ++ GGGRY GLV +  G ++   GF IG  RL
Sbjct: 261 LDYYNHTIFEVMVKAKSLGNGYT-----TICGGGRYSGLVEQLGGPDLSGVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L         +     + +  +    D+  +     Q  R AG+ A+      +   
Sbjct: 316 LLLLNDEGI---QLPTDDHLDVYVVGIGDDTNLESLQLVQAARHAGLIADRDF-MGRKPK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q + ADR +  + +  G  E   G + +K +A GKE+S ++ +  +       +
Sbjct: 372 AQFRTADRMHARVVLTVGKRELEEGNVHLKVMATGKEVSVKLADLLNDFANVFEE 426


>gi|29376493|ref|NP_815647.1| histidyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227519313|ref|ZP_03949362.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227555480|ref|ZP_03985527.1| histidyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257416407|ref|ZP_05593401.1| histidyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|39932157|sp|Q833I1|SYH_ENTFA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|29343957|gb|AAO81717.1| histidyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227073242|gb|EEI11205.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227175390|gb|EEI56362.1| histidyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257158235|gb|EEU88195.1| histidyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|315147634|gb|EFT91650.1| histidyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315574558|gb|EFU86749.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315581800|gb|EFU93991.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 433

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 96/459 (20%), Positives = 187/459 (40%), Gaps = 50/459 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + ++ R I+++Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQKPKGTNDILPGTSEKWQFVEETARLIFKDYQYQEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   EN         P +TY +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVENKLYGPEYTKPYKTYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS     D E+  M  D  + +GI++    I     K       + 
Sbjct: 121 GRLRQFHQIGVEAFGSENPALDVEIMAMALDFFKQLGIQQIKLVINSLGDKETRATYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +     L    + D   +     +++L  + + D          +   +   ++ 
Sbjct: 181 LIDYLEPHMAEL----SEDSQRRLHENPLRVLDSKDKKDK---------VIVAEAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+   +     + +++       +  + +                       VRGL+YY
Sbjct: 228 YLNEPSKAHFEAVTDMLDLLEIPYEIDSNM-----------------------VRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E       M+E  K     ++  GGRY+GLV    G + P  GF +GI R+++ +
Sbjct: 265 THTIFEI------MSEAPKMGAQSTICAGGRYNGLVEELGGPDTPGFGFGMGIERVLLTM 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ E     + E+       +   SD+        Q +R  G  A+     ++    Q K
Sbjct: 319 EAEEVVIPALSELDA---YVVGIGSDTNVAALQLVQSIRNFGFSADRDY-MNRKPKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD+    L +  G  E + G++ +K +A  +E +  + 
Sbjct: 375 TADKLQAKLVLTIGENELNEGIVNVKSMATREEKAFPLS 413


>gi|313886853|ref|ZP_07820557.1| histidine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332299959|ref|YP_004441880.1| Histidyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|312923650|gb|EFR34455.1| histidine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332177022|gb|AEE12712.1| Histidyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 459

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 138/503 (27%), Positives = 225/503 (44%), Gaps = 69/503 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+R RN I ++IR+++  YGF+ IETP +E   +L GK+  + D  
Sbjct: 3   KPSIPKGTRDFGAEEMRRRNYIFETIRSVFALYGFEQIETPAMEQLTTLTGKYGVEGDRL 62

Query: 65  ---RPNKGVF-------SLQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCR 107
                N G +       +  ++    ++       LRYDLT P ARYV  + + + FP +
Sbjct: 63  LFKILNSGDYKAGIDAETFTEESPAALAARLCDRGLRYDLTVPFARYVVMHRNELTFPFK 122

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y++ PV+R ++   GR+R+F QCD D +G+ +   + +   M+ +             +
Sbjct: 123 RYQMQPVWRADRPQKGRYREFYQCDADVIGTDSLMPEVDFVYMIDEVFRR---LDLRTTL 179

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +NNRKIL GI E I             +   +DKLDK  ++ V   L E   D      
Sbjct: 180 LLNNRKILAGIAEVIKAPD-----RLAQLTICMDKLDKTSVEAVLADLVESGFD------ 228

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                + E +  +++    + +K +  L +L+  +  G KG  EL  + + V  S   ++
Sbjct: 229 ---PDSLEPVRKVLTLEGSNRDK-VTTLRQLLADSEIGLKGLEELEYVLDHVDTSDLMTD 284

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
            +  S ++ RGL+YYTG + E          K      GS+ GGGRYD L   F    V 
Sbjct: 285 -LTFSPSLARGLDYYTGAILEV---------KSLDAPMGSISGGGRYDNLTGIFGLDGVS 334

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             G S G  R+   + SL      +     ++I     +   L K     + LR AG+  
Sbjct: 335 GVGISFGAERIYDIMLSLGKFETAMAPEERIIIVNFGEEE--LQKLLPIARQLRQAGLPT 392

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E++  + K    QL YA+ R C   II G+ E S G + IKD+  G +            
Sbjct: 393 EVYPSADK-MKKQLSYANSRGCRYVIIAGSQELSDGKVSIKDMTLGTQ------------ 439

Query: 468 EARVAQITIPISELVSTVKKILQ 490
                    P+ E+VS +++ L 
Sbjct: 440 ------QECPLEEIVSRLRESLS 456


>gi|257084827|ref|ZP_05579188.1| histidyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256992857|gb|EEU80159.1| histidyl-tRNA synthetase [Enterococcus faecalis Fly1]
          Length = 433

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 95/459 (20%), Positives = 187/459 (40%), Gaps = 50/459 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + ++ R I+++Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQKPKGTNDILPGTSEKWQFVEETARLIFKDYQYQEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   EN         P +TY +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVENKLYGPEYTKPYKTYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS     D E+  M  D  + +GI++    I     K       + 
Sbjct: 121 GRLRQFHQIGVEAFGSENPALDVEIMAMALDFFKQLGIQQIKLVINSLGDKETRATYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +     L    + D   +     +++L  + + D          +   +   ++ 
Sbjct: 181 LIDYLEPHMAEL----SEDSQRRLHENPLRVLDSKDKKDK---------VIVAEAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+   +     + +++       +  + +                       VRGL+YY
Sbjct: 228 YLNEPSKAHFEAVTDMLDLLEIPYEIDSNM-----------------------VRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E       M+E  K     ++  GGRY+GLV    G + P  GF +GI R+++ +
Sbjct: 265 THTIFEI------MSEAPKMGAQSTICAGGRYNGLVEELGGPDTPGFGFGMGIERVLLTM 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ E     + E+       +   S++        Q +R  G  A+     ++    Q K
Sbjct: 319 EAEEVVIPALSELDA---YVVGIGSETNVAALQLVQSIRNFGFSADRDY-MNRKPKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD+    L +  G  E + G++ +K +A  +E +  + 
Sbjct: 375 TADKLQAKLVLTIGENELNEGIVNVKSMATREEKAFPLS 413


>gi|115351800|ref|YP_773639.1| histidyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170702838|ref|ZP_02893687.1| histidyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|172060771|ref|YP_001808423.1| histidyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|122323093|sp|Q0BEW8|SYH_BURCM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558658|sp|B1YR43|SYH_BURA4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|115281788|gb|ABI87305.1| histidyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170132256|gb|EDT00735.1| histidyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|171993288|gb|ACB64207.1| histidyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 446

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 102/503 (20%), Positives = 201/503 (39%), Gaps = 68/503 (13%)

Query: 1   MGKKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M ++ +   +L   +G  D   ++  +      +++++   YG+  I TP++E++    +
Sbjct: 1   MTEQKRKIEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR
Sbjct: 61  GIGEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         
Sbjct: 121 HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEER 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +                ++ 
Sbjct: 181 AAHRVELIKYLEQFADVLD----EDAKRRLYTNPLRVLDTKN---------PALQEIAQN 227

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL  +       L  L+                          +   KI+  +V
Sbjct: 228 APKLIDFLGDESRAHFEGLQRLLLAN-----------------------NIPFKINPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI 
Sbjct: 265 RGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK- 415
           R++  LK  + +     E   V +  +     +  +  +  + LR  G+       +   
Sbjct: 317 RILELLKEEDLAP----EQEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSADGA 372

Query: 416 --NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVA 472
             +F +Q+K AD      A+I G  E + G + +K L   G+E  + +            
Sbjct: 373 PASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGAGEEGEKNV------------ 420

Query: 473 QITIPISELVSTVKKILQENKEE 495
           Q T+P+  L   +   +  + E+
Sbjct: 421 QQTVPVESLTEFLINAMVASAED 443


>gi|323143785|ref|ZP_08078453.1| histidine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416498|gb|EFY07164.1| histidine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 425

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 109/497 (21%), Positives = 181/497 (36%), Gaps = 86/497 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           L  +  RG  D   ++  +  ++   +R    ++G+  I  P+LE +    + + +  D 
Sbjct: 3   LSVQAVRGMNDLLPEDTSVWQQVESILRETVASFGYSEIRLPILEKTPLFCRAIGEVTDV 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +++ +D  G+ +SLR + TA   R   E+        R + +GP+FR+E+   GR+
Sbjct: 63  VEKEMYTFEDRSGEMLSLRPEGTAGCVRACLEHNLIYNQEQRLWYMGPMFRHERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILD 176
           RQF Q  V+  G      DAE+ M+     + +G                     R  L 
Sbjct: 123 RQFHQLGVEIFGLKGPDIDAEIIMLTHALWKKLGIADDLSLELNTLGTKEERKAFRDELV 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             LE      D+            D   +     +++L  +                 + 
Sbjct: 183 SYLEAHFDELDE------------DSKRRTHTNPLRVLDSKDPK---------VGEVLKG 221

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +      + +     L +L+          N L                       V
Sbjct: 222 APKLSDHFGEETKAHFEGLKKLLDAAGIKYTINNRL-----------------------V 258

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +               G+V GGGRYDGLV    G   PA GF +G+ 
Sbjct: 259 RGLDYYNLTVFEWVTTA--------LGAQGTVCGGGRYDGLVEELGGTATPAVGFGMGLE 310

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSS 414
           RL++ L +L      +K    V +  +    +S  +  M    LR A  G+R  M     
Sbjct: 311 RLMLLLVTLGK----VKTKPSVDVYIVGSGENSAKEQAMTALKLRDALPGVRI-MNHCGG 365

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            NF  Q K AD+    +A++ G  E + G L +KDL                     +Q 
Sbjct: 366 GNFKRQFKRADKVGAKVAVVLGEAEIASGTLGVKDLR-----------------NEGSQQ 408

Query: 475 TIPISELVSTVKKILQE 491
               +  V+ + K+LQ 
Sbjct: 409 EYDFAGAVAAISKMLQA 425


>gi|254521834|ref|ZP_05133889.1| histidyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219719425|gb|EED37950.1| histidyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 465

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 144/506 (28%), Positives = 232/506 (45%), Gaps = 64/506 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGTLELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQ------------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
               V+ +Q            D     ++LR+DLT PLARYVAE+   + FP R Y++  
Sbjct: 62  ---QVYFVQSTGALANAAESGDRSLPEMALRFDLTVPLARYVAEHEHELTFPFRRYQMQR 118

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GRFR+F QCD+D +G  + +   +  ++         ++  D+ I +NNRK
Sbjct: 119 VYRGERAQRGRFREFYQCDIDVIGKDSLSVRYDAEVLAVIHAVFSELRIGDFSIQLNNRK 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           ++ G  E +G+   ++   +L VLR +DKLDK G   V+  L            +G  + 
Sbjct: 179 LMRGFFESLGVAEGER---QLAVLREVDKLDKRGADYVRETL----------VGEGFGIP 225

Query: 234 SEQIDIMVSFLSIDLEKS------MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
           +EQ++ +++F+++  +        +  L      +     G  EL  + +LV+  G    
Sbjct: 226 AEQVEKILAFVAVRSQGHADALAQLAALEADAGSSEILRTGVAELREVLQLVQALGVPET 285

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
              ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S +    +P
Sbjct: 286 AYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYEDLASHYSKSKLP 337

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             G SIG+SRL   L+          E   V       D   + +     + LR  GI  
Sbjct: 338 GVGISIGLSRLFWQLREAGL--IEGIEGSSVQALVALMDEQGMPQSLDIARRLRAGGINT 395

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E+ +   K  G Q +YA +      ++ G  E +RG++ +KDL                 
Sbjct: 396 EVQM-EPKKIGKQFQYAAKAGIRFVVLAGEDELARGVVAVKDL----------------- 437

Query: 468 EARVAQITIPISELVSTVKKILQENK 493
             R  Q  +   EL ST++  L+++K
Sbjct: 438 -LREQQFEVSRDELASTLQVELEQSK 462


>gi|327394802|dbj|BAK12224.1| histidyl-tRNA synthetase HisS [Pantoea ananatis AJ13355]
          Length = 414

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 97/456 (21%), Positives = 172/456 (37%), Gaps = 68/456 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    +  I  R+ D ++++  +YG+  I  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDFLPADTAIWQRVEDVLKSVLASYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D +G+ ++LR + TA   R   E+        R + +GP+FR E+   GR+RQF Q  V
Sbjct: 61  DDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYMGPMFRYERPQKGRYRQFHQIGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILEKIGL 184
           +  G      DAE+ M+ A   +A+G                   N R  L   LE+   
Sbjct: 121 EVFGLQGPDIDAELIMLNARWWKALGIADHVRLELNSIGSPEARANYRDALVAFLEQHKE 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D+            D   +     +++L  +                      +  +L
Sbjct: 181 ALDE------------DCKRRMYSNPMRVLDSKN---------PDIQTLLNDAPQLGDYL 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            ++  +    L  L+            L                       VRGL+YY  
Sbjct: 220 DVESREHFDGLRALLDDAGIAYTVNQRL-----------------------VRGLDYYNR 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V E +               G+V GGGRYDGLV +  G+  P  GF++G+ RL++ +++
Sbjct: 257 TVIEWVT--------DSLGSQGTVCGGGRYDGLVEQLGGRATPGVGFAMGMERLVLLVQA 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLK 422
           +       +    V +  +       S      + LR     ++     G   NF  Q  
Sbjct: 309 VN---PEFEPARNVDVYVIASGQGVQSAAMQLAEKLRDHLPEMKLMTNFGGG-NFKKQFA 364

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            AD+    +A++ G  E+  G + IKDL  G++ + 
Sbjct: 365 RADKWGARVALVLGEDEQKAGQVVIKDLRNGEQQTL 400


>gi|255975491|ref|ZP_05426077.1| histidyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256961540|ref|ZP_05565711.1| histidyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|257079351|ref|ZP_05573712.1| histidyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257090253|ref|ZP_05584614.1| histidyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|293384700|ref|ZP_06630555.1| histidine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387400|ref|ZP_06631955.1| histidine--tRNA ligase [Enterococcus faecalis S613]
 gi|294779747|ref|ZP_06745134.1| histidine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307268142|ref|ZP_07549529.1| histidyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307277693|ref|ZP_07558779.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|312902750|ref|ZP_07761954.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312908314|ref|ZP_07767278.1| histidyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910612|ref|ZP_07769454.1| histidyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|255968363|gb|EET98985.1| histidyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256952036|gb|EEU68668.1| histidyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256987381|gb|EEU74683.1| histidyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256999065|gb|EEU85585.1| histidyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|291078007|gb|EFE15371.1| histidine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083191|gb|EFE20154.1| histidine--tRNA ligase [Enterococcus faecalis S613]
 gi|294453121|gb|EFG21536.1| histidine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295113236|emb|CBL31873.1| histidyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306505572|gb|EFM74756.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306515532|gb|EFM84060.1| histidyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310625728|gb|EFQ09011.1| histidyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310633804|gb|EFQ17087.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311289160|gb|EFQ67716.1| histidyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|315161367|gb|EFU05384.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315576681|gb|EFU88872.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|323481107|gb|ADX80546.1| histidyl-tRNA synthetase [Enterococcus faecalis 62]
 gi|329568729|gb|EGG50529.1| histidine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 433

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 95/459 (20%), Positives = 187/459 (40%), Gaps = 50/459 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + ++ R I+++Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQKPKGTNDILPGTSEKWQFVEETARLIFKDYQYQEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   EN         P +TY +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVENKLYGPEYTKPYKTYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS     D E+  M  D  + +GI++    I     K       + 
Sbjct: 121 GRLRQFHQIGVEAFGSENPALDVEIMAMALDFFKQLGIQQIKLVINSLGDKETRATYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +     L    + D   +     +++L  + + D          +   +   ++ 
Sbjct: 181 LIDYLEPHMAEL----SEDSQRRLHENPLRVLDSKDKKDK---------VIVAEAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+   +     + +++       +  + +                       VRGL+YY
Sbjct: 228 YLNEPSKAHFEAVTDMLDLLEIPYEIDSNM-----------------------VRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E       M+E  K     ++  GGRY+GLV    G + P  GF +GI R+++ +
Sbjct: 265 THTIFEI------MSEAPKMGAQSTICAGGRYNGLVEELGGPDTPGFGFGMGIERVLLTM 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ E     + E+       +   S++        Q +R  G  A+     ++    Q K
Sbjct: 319 EAEEVVIPALSELDA---YVVGIGSETNIAALQLVQSIRNFGFSADRDY-MNRKPKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD+    L +  G  E + G++ +K +A  +E +  + 
Sbjct: 375 TADKLQAKLVLTIGENELNEGIVNVKSMATREEKAFPLS 413


>gi|300361855|ref|ZP_07058032.1| histidine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354474|gb|EFJ70345.1| histidine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 428

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 111/465 (23%), Positives = 184/465 (39%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +     ++    RN ++   +  I TP  E  +   +   +  D 
Sbjct: 1   MKVQRPKGTVDILPADSGSWEKVETIARNFFKRANYREIRTPSFENYEVFSRSSGESSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   EN         P   Y I   FR E+   
Sbjct: 61  VEKEMYDFNDKGGRHIALRPEGTAGVVRAYVENKLYGPDVVKPFNVYYIDNTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS++  AD E  MM  D L  +G+K  + HI        RK     
Sbjct: 121 GRQREFHQIGVESFGSNSPLADVETIMMGHDLLAELGVKNYELHINTLGNAQVRKDYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +  +  +++L  +   D                 
Sbjct: 181 LVNYFTPLKDQLSE--------DSQRRLSMNPLRILDSKADEDKQF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +V +L  D +K+   + ++++         ++L                       VRG
Sbjct: 224 RIVDYLDEDSKKNFETITDMLEQLGINYVLDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDKNLWESAT-----TILGGGRYNHLVEEFDGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK    +    +    +     +    +  K     + LR  G +A+  +   K   
Sbjct: 316 MLVLKEQNPALFEDE---GIDFFITNIGEGTEMKAVEIARSLRKQGFKAQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q + ADR +    I  G  E   G+L IK LA GK L   +++ 
Sbjct: 372 QQFRKADRVHAKFVITLGAKELENGVLNIKRLADGKTLDLSLEDL 416


>gi|312371830|gb|EFR19918.1| hypothetical protein AND_21591 [Anopheles darlingi]
          Length = 528

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 120/476 (25%), Positives = 219/476 (46%), Gaps = 36/476 (7%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
              L  +  +G  D   + + +R R+LD +  ++  +G + I+TP+ E  + L     D+
Sbjct: 74  NRNLALKTAKGTRDYGPEAMTLRQRVLDHVVTVFRRHGAETIDTPVFELKEVLTGKYGDD 133

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +K ++ L+D  G+ ++LRYDLT P ARYV       VF  + Y I  V+R +     
Sbjct: 134 ---SKLIYDLKDQGGELLALRYDLTVPFARYV---GMGNVFNIKRYHIAKVYRRDNPQIT 187

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G+         C+ +   + +  +   ++ + +N+RK+LDG+ E 
Sbjct: 188 RGRYREFYQCDFDIAGTYDPMLPDAECVKVVAEILS-ELNIGEFTVKLNHRKLLDGMFEA 246

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  +    +      ++DKLDK     V+            +      L+   +D + 
Sbjct: 247 CGVPVE----KFRTACSSVDKLDKTPWDEVR-----------QEMIHEKGLSEATVDRIG 291

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++++     + +     + +KG  +  +G  ++ ++ +         + I    ++ RG
Sbjct: 292 EYVTLSGGIELVDRLSEDQHLKGIASAMEGLADMRLLLQYCEIFEIG-HLIAFDLSLARG 350

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGIS 356
           L+YYTG +YEA+LG    ++    V  GSV GGGRYD L  +   K + VP  G SIG+ 
Sbjct: 351 LDYYTGVIYEAVLGGSNTDD---DVAVGSVAGGGRYDNLVGMFNPKRKQVPCVGVSIGVE 407

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   L++    +          I           K       L +AG++AE     +  
Sbjct: 408 RIFSILEAK---STGRSRTNETDIYVASAHKGLHLKRLEILNKLWSAGLKAEHSYKLNPK 464

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              QL++ +    P AII G GE SRG+++++++A  KE    +++      A++ 
Sbjct: 465 LLAQLQHCEEYQIPYAIILGDGELSRGVVKLREIATRKEEELPLESLTEQIRAKLQ 520


>gi|217077192|ref|YP_002334910.1| histidyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226737079|sp|B7IHK5|SYH_THEAB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|217037047|gb|ACJ75569.1| histidyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 418

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 109/468 (23%), Positives = 183/468 (39%), Gaps = 58/468 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            +  +G  D    +I+    I + ++     YG+  I TP+ E ++   + +  + D   
Sbjct: 2   YKRIKGTEDIFGDDIKYWYYIENVVKETVRLYGYSEIRTPIFEATELFIRSVGEETDIVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D   + I+LR + TAP  R   EN       P R + IGP+FR E+   GR R
Sbjct: 62  KEMYTFEDKGQRSITLRPEGTAPTIRAFIENSMMATGLPKRLFYIGPMFRYERPQKGRQR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG-ILEKIGLH 185
           QF Q  V+ +GS +  ADAE  ++    L+ +G+      I               +  +
Sbjct: 122 QFHQFGVELIGSPSPLADAEAIIVADRVLKNLGLLNYTIKINSIGCDKCRANYKNALKEY 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             DKL+         D   ++    ++LL  +   +   D              +  +L 
Sbjct: 182 YSDKLDYV-----CDDCKRRYNTNVLRLLDCKVDVEYIKD-----------APKITDYLC 225

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D +    E   L+                            +      +VRGL+YY G 
Sbjct: 226 DDCKHHYEETKRLLDNL-----------------------KIKYVEDPLLVRGLDYYNGV 262

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E                  +VGGGGRYD L+    G   P+ GF++GI RLI+ALK+ 
Sbjct: 263 VFEI--------HHGDLGAQSAVGGGGRYDKLIKELGGSQTPSLGFAMGIERLIIALKNE 314

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +     IK      I        +  +     + LR  GI         +    QLK+A 
Sbjct: 315 KIPVEEIKNNE---IFVAHLGEQARIEALKIAEDLRDNGISVVFS-TMERGLSAQLKHAA 370

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE----IKNNESWREA 469
           R  C L +I G  E  R ++ ++++  G+++  E    +   + W E 
Sbjct: 371 RLKCKLCVIVGENELERNIVILRNMETGEQIEIERDYVVGTAKEWIEG 418


>gi|256762900|ref|ZP_05503480.1| histidyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256964756|ref|ZP_05568927.1| histidyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257082209|ref|ZP_05576570.1| histidyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257087176|ref|ZP_05581537.1| histidyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|307272837|ref|ZP_07554084.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307287884|ref|ZP_07567917.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312900882|ref|ZP_07760176.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|256684151|gb|EEU23846.1| histidyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256955252|gb|EEU71884.1| histidyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256990239|gb|EEU77541.1| histidyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256995206|gb|EEU82508.1| histidyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|306501029|gb|EFM70336.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306510451|gb|EFM79474.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|311291981|gb|EFQ70537.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315025976|gb|EFT37908.1| histidyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315033288|gb|EFT45220.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315143401|gb|EFT87417.1| histidyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315163664|gb|EFU07681.1| histidyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315167504|gb|EFU11521.1| histidyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315169380|gb|EFU13397.1| histidyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315174312|gb|EFU18329.1| histidyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|327535486|gb|AEA94320.1| histidine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 433

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 95/459 (20%), Positives = 187/459 (40%), Gaps = 50/459 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + ++ R I+++Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQKPKGTNDILPGTSEKWQFVEETARLIFKDYQYQEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   EN         P +TY +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVENKLYGPEYTKPYKTYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS     D E+  M  D  + +GI++    I     K       + 
Sbjct: 121 GRLRQFHQIGVEAFGSENPALDVEIMAMALDFFKQLGIQQIKLVINSLGDKETRATYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +     L    + D   +     +++L  + + D          +   +   ++ 
Sbjct: 181 LIDYLEPHMAEL----SEDSQRRLHENPLRVLDSKDKKDK---------VIVAEAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+   +     + +++       +  + +                       VRGL+YY
Sbjct: 228 YLNEPSKAHFEAVTDMLDLLEIPYEIDSNM-----------------------VRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E       M+E  K     ++  GGRY+GLV    G + P  GF +GI R+++ +
Sbjct: 265 THTIFEI------MSEAPKMGAQSTICAGGRYNGLVEELGGPDTPGFGFGMGIERVLLTM 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ E     + E+       +   S++        Q +R  G  A+     ++    Q K
Sbjct: 319 EAEEVVIPALSELDA---YVVGIGSETNVAALQLVQSIRNFGFSADRDY-MNRKPKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD+    L +  G  E + G++ +K +A  +E +  + 
Sbjct: 375 TADKLQAKLVLTIGENELNEGIVNVKSMATREEKAFPLS 413


>gi|296270027|ref|YP_003652659.1| histidyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296092814|gb|ADG88766.1| histidyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 418

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 98/476 (20%), Positives = 180/476 (37%), Gaps = 68/476 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           I D++       G+  IETP+ E +    + + +  D 
Sbjct: 1   MIFQAPKGTFDWMPPRSESVLAIRDALAAPVRRAGYSYIETPIFEDTRLFQRGVGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
             K +++ Q   GQ ++LR + TA + R V E+       P + +  G  FR E+   GR
Sbjct: 61  VTKEMYTFQSKGGQSLTLRPEGTASVMRAVLEHGLYGGPLPIKLWYSGSYFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--------YHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++  D   ++G++R                 R  L 
Sbjct: 121 YRHFSQVGAEALGAQDPAIDAELIVLALDGYASLGLRRVRLLLNSLGCRECRPGYRAALQ 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L    +    +  LR +D       + V+  L +                   
Sbjct: 181 EFLRGLDLDEATRHRVEINPLRVLDDK----REEVRAQLTD------------------- 217

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             +++  L    +    E+  L+                                   +V
Sbjct: 218 APLVIDHLCGACKAFHEEVRGLLSAA-----------------------GVSYIDEPKLV 254

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                SVGGGGRYDGL     G  +P  G+++G+ 
Sbjct: 255 RGLDYYTRTTFEFV--------HDGLGAQSSVGGGGRYDGLSEMIGGPPLPGVGWALGVD 306

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++A+++    +   +    V +  +    ++  +       LR AG+  +M  G  ++
Sbjct: 307 RTVLAMEAEGLLS---ERPTRVDVFAVPLGDEARRRIFPLVTGLRRAGLAVDMAFG-GRS 362

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +K ADR     A+I G  +   G  QIKD+  G++ +  +       + R++
Sbjct: 363 VKGAMKAADRSGARYAVILGERDLEAGAAQIKDMTTGEQTAVPLAEVVDVLKGRLS 418


>gi|170062845|ref|XP_001866846.1| histidyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167880611|gb|EDS43994.1| histidyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 521

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 119/487 (24%), Positives = 215/487 (44%), Gaps = 45/487 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
              +  + P+G  D   + + +R RI D +  +++ +G + I+TP+ E  + L     ++
Sbjct: 57  NKNITLKTPKGTRDYGPESMALRQRIFDKVIAVFKKHGAETIDTPVFELKEVLTGKYGED 116

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--G 121
              +K ++ L+D  G+ ++LRYDLT P AR+V       VF  R Y I  V+R +     
Sbjct: 117 ---SKLIYDLKDQGGEILALRYDLTVPFARFV---GMGNVFNIRRYHIAKVYRRDNPAMT 170

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G+         C+ +   + A  +   ++ + +N+RK+LDG+ E 
Sbjct: 171 KGRYREFYQCDFDIAGTYDPMLPDAECVKVVAEILA-ELNIGEFVVKLNHRKLLDGMFEA 229

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  D    +   +  ++DKLDK     V+  + +              L     D + 
Sbjct: 230 CGVPAD----KFRTICSSVDKLDKTPWDEVRKEMIDE-----------KGLDGAIADKIG 274

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            F+ +     + +     E +K   +  +G  ++ ++ +     G   ++I    ++ RG
Sbjct: 275 EFVRLSGGVDLVDKLAADENLKNIKSAVEGIEDMRLLLQYCAVFG-LQDQIIFDLSLARG 333

Query: 299 LEYYTGCVYEAILGFPVM-------------NEKQKPVVFGSVGGGGRYDGL--VSRFKG 343
           L+YYTG +YEA+L                   ++++ V  GSV GGGRYD L  +   K 
Sbjct: 334 LDYYTGVIYEAVLKSEPAAPAPKTNGTKSKAKQQEEEVSVGSVAGGGRYDNLVGMFNPKR 393

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
           + VP  G SIG+ R+   L++   +         + +           K       L  A
Sbjct: 394 KQVPCVGVSIGVERIFSILEA--KAQQEKIRTTEIEVYVASAHKGLHLKRMELLGKLWDA 451

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G +AE     +     QL+Y +    P AI+ G GE +RG+++++++   KE    +   
Sbjct: 452 GFKAEHSYKQNPKLLAQLQYCEENQIPYAIVLGDGELARGVVKLREITSRKEEEIAVDGL 511

Query: 464 ESWREAR 470
                 R
Sbjct: 512 AEELRKR 518


>gi|332158548|ref|YP_004423827.1| histidyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034011|gb|AEC51823.1| histidyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 433

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 123/462 (26%), Positives = 213/462 (46%), Gaps = 36/462 (7%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  +G  D   +E+  R  + + IR ++E YGF  + TP++EY+        +E    K
Sbjct: 2   IERVKGTRDFLPEEMIKRRWVFERIREVFEAYGFKEVLTPVMEYTKLFQLRSGEEIV--K 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++ +D  G+ +SLR D+T+ +AR    +F     P + Y I  +FR E+   GR+R+F
Sbjct: 60  QLYAFKDKGGRDVSLRPDMTSSVARLYVNSFQNAPKPIKWYYIANMFRYEEPQSGRYREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +GS    ADAE+  +  ++  A G++  D+ + I NR +LD   + +G+    
Sbjct: 120 WQAGVELIGSDKVEADAEVIALFVESYLATGLR--DFTVNIGNRILLDEFAKMLGV---- 173

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              + + ++R IDK DK   +     L +              L   +I+ ++  ++I  
Sbjct: 174 --RDNIGLMRIIDKRDKLTQEEFIKALKDF------------GLKDNKINKVLELINIKG 219

Query: 249 E-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           +   +  L E +  +    +  + L  ++EL+   G  S  I+I   I RG +YYTG V+
Sbjct: 220 KPDDVLPLAEELFNSGKSMEEISRLYKLTELLEWYGV-SEWIRIDLGIARGFDYYTGIVF 278

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           EAI    +                 RYD L+  F G+  PATGF+IGI RLI  L+  + 
Sbjct: 279 EAIAPNELGIGSIGGGG--------RYDNLIEVFGGRPTPATGFAIGIERLIPILEWKKL 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                 E     +  +    +        T  LR A I+ E+ L + +     L YA+R 
Sbjct: 331 IPKLRVEPD---VFVVPITEEVRRIAIDITTRLRRARIKTELEL-TGRKLRKALDYANRI 386

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              + II G  +  RG++ ++D+  G++    I++ E     
Sbjct: 387 GVKVTIIVGKKDVERGVVTVRDMETGEQSEVNIQDVEEKVRE 428


>gi|313497223|gb|ADR58589.1| HisS [Pseudomonas putida BIRD-1]
          Length = 429

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 103/487 (21%), Positives = 186/487 (38%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + ++YG+  I TP++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQSPLWRYFEGTVAGLLDSYGYSQIRTPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNE 118
            +  D   K +++ +D +G  ++LR + TA   R V E+  T      + + IG +FR+E
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLEHGITGNGQVQKLWYIGQMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           +   GR+RQF Q  V+         DAE+ M+       +G                   
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIMLTWRLWGLLGIQDAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +       D    
Sbjct: 177 RYRDALVEFLSARLEQLDE------------DSQRRLKSNPLRILDSK-------DQNTQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVG--APKLEDYLDEESRVHFEGLKARLDAA-----------------------GIPF 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I++ +VRGL+YY+  V+E +          K    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINTKLVRGLDYYSKTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQMGGKPTTGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++GI RLI+ L++L     +I     V +      ++        ++ LR    G+R 
Sbjct: 305 GFAMGIERLILLLETLGKVPESISRQIDVYLCAFGEQAEL--AGLRLSEGLRDRLPGLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
            +  G   +F +Q K AD+     A+I G  E ++  + +K L  +G++ +         
Sbjct: 363 AVNAGGG-SFKSQFKKADKSGALFALILGDDELAKQEIGLKPLRGQGEQQNIAWDALAEH 421

Query: 467 REARVAQ 473
            E  +AQ
Sbjct: 422 LETAIAQ 428


>gi|116512890|ref|YP_811797.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|122939953|sp|Q02WI8|SYH_LACLS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116108544|gb|ABJ73684.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 430

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 106/476 (22%), Positives = 184/476 (38%), Gaps = 60/476 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G AD    E      I +  R ++ +Y F  I TP+ E  +   +   +  D 
Sbjct: 1   MKLQKPKGTADLLPAETAKWQYIEEIARGVFNDYNFKEIRTPMFESYELFSRATGETSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++  +D  G+ I+LR + TA   R   EN         P + +   P+FR E+   
Sbjct: 61  VTKEMYDFEDKGGRHIALRPEGTASAVRAYIENKLYAPEVVKPVKLWYDAPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR RQF Q  V+ +G      D E+  M       +GI       +    + +RK     
Sbjct: 121 GRLRQFHQFGVECLGLKNSAVDVEIIAMADTLFRQLGISGVKLSLNTLGDMESRKAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L       +++L+E        D   +     +++L  +   D +           +   
Sbjct: 181 LIDYLTPFENQLSE--------DSRRRLNENPLRVLDSKEAEDIA---------IVKNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+   +    E+  L++                         +    I S +VRG
Sbjct: 224 AILDYLNETSKAYFEEVKALLEAL-----------------------NIEYTIDSNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I+ F             +V GGGRYDGLV  F G   PA GF +GI RL
Sbjct: 261 LDYYNDTIFEFIVNFDGKE--------LTVCGGGRYDGLVEYFDGPATPAFGFGLGIERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++  +  E +    + +  V I  M   ++   +     + LR    + E    S++  G
Sbjct: 313 LMIAEKQEINFIPEETLD-VYIAVMGEKANL--EATKLAESLREQAFKVERDF-SNRKLG 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            Q K A++    L I  G  E   G +++K     K++   +K           +I
Sbjct: 369 AQFKTAEKLGAELIITLGEDEVRTGQIKVKHNQTRKQVETTLKAVHESFAPIFEEI 424


>gi|89890859|ref|ZP_01202368.1| histidyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517004|gb|EAS19662.1| histidyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 473

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 133/486 (27%), Positives = 230/486 (47%), Gaps = 58/486 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRP 66
           +  +P+G  D    E++ R  I+++I++ +E+YGF PIETP  E SD  LGK+  + DR 
Sbjct: 21  KPSIPKGTRDFSPVEVQRRQYIMNTIKHHFEHYGFMPIETPSFENSDTLLGKYGEEGDRL 80

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
              +F + ++         + +               +LRYDLT P ARYV ++ + I F
Sbjct: 81  ---IFKILNNGQYLKKVKDEDLHSKNEHKVSPQISKRALRYDLTVPFARYVVQHQNDIAF 137

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GRF++F QCD D VGS++   + E+  +       +  K + 
Sbjct: 138 PFKRYQIQPVWRADRPQHGRFQEFYQCDADVVGSNSLLQEVELVKLYDAVFTDL--KLDG 195

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI +   +  +D+L +  + L  +D               +   D   
Sbjct: 196 CTIKINNRKILAGIAQ--MIGAEDQLIDFTVALDKLD---------------KIGADKVK 238

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           +      ++   I+ +    S+  E    +  +  L+  +  G+KG  EL  I++ V + 
Sbjct: 239 EEMVLKGISETAIEKLNPVFSLQGEFASKLDVMQSLLSDSEIGQKGIEELEFINKQVVQL 298

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G  S  + +  T+ RGL YYTGC++E      V          GS+GGGGRYD L S F 
Sbjct: 299 GLKSAVLDLDITLARGLNYYTGCIFEVAAPEGVK--------MGSIGGGGRYDDLTSMFG 350

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            ++V   G S G+ R+ + ++ L    ++++    V +  ++      +         R 
Sbjct: 351 LKDVSGVGISFGLDRIYLVIEELGLFPDSVR--AGVDVLFINFGEKEAAYAMDLVFRFRD 408

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            GI+ E++  ++K    Q+KYADR   P  I+ G  E +   L +K++  G++   + + 
Sbjct: 409 NGIKTELYPEAAKT-NKQMKYADRNEIPYVILLGEDEIAAESLLLKNMKTGEQELLKPQE 467

Query: 463 NESWRE 468
                +
Sbjct: 468 VIEKLQ 473


>gi|257422240|ref|ZP_05599230.1| histidyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257164064|gb|EEU94024.1| histidyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315157280|gb|EFU01297.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 433

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 95/459 (20%), Positives = 188/459 (40%), Gaps = 50/459 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + ++ R I+++Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQKPKGTNDILPGTSEKWQFVEETARLIFKDYQYQEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   EN         P +TY +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVENKLYGPEYTKPYKTYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS     D E+  M  D  + +GI++    I     K       + 
Sbjct: 121 GRLRQFHQIGVEAFGSENPALDVEIMAMALDFFKQLGIQQIKLVINSLGDKETRATYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +     L    + D   +     +++L  + + D          +   +   ++ 
Sbjct: 181 LIDYLEPHMAEL----SEDSQRRLHENPLRVLDSKDKKDK---------VIVAEAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+   +     + +++       +  + +                       VRGL+YY
Sbjct: 228 YLNEPSKAHFEAVTDMLDLLEIPYEIDSNM-----------------------VRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E       M+E  K     ++  GGRY+GLV    G + P  GF +GI R+++ +
Sbjct: 265 THTIFEI------MSEAPKMGAQSTICAGGRYNGLVEELGGPDTPGFGFGMGIERVLLTM 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ E   + + E+       +   S++        Q +R  G  A+     ++    Q K
Sbjct: 319 EAEEVVISALSELDA---YVVGIGSETNIAALQLVQSIRNFGFSADRDY-MNRKPKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD+    L +  G  E + G++ +K +A  +E +  + 
Sbjct: 375 TADKLQAKLVLTIGENELNEGIVNVKSMATREEKAFPLS 413


>gi|195481374|ref|XP_002101624.1| GE17731 [Drosophila yakuba]
 gi|194189148|gb|EDX02732.1| GE17731 [Drosophila yakuba]
          Length = 521

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 114/487 (23%), Positives = 213/487 (43%), Gaps = 39/487 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++
Sbjct: 54  NQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED 113

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     G
Sbjct: 114 ---SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTKG 169

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+         C+ +   +    +   DY I +N+R++LDG+ +  G
Sbjct: 170 RYREFYQCDFDIAGTYDPMLPDAECVKIVSEILDT-LDIGDYVIKLNHRQLLDGMFQACG 228

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  D        +  A+DKLDK     V+  + E              L     D +  +
Sbjct: 229 VPADS----FRTICSAVDKLDKSPWADVRKEMVEE-----------KGLDEAAADRIGEY 273

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +     + E     E +K      KG   + ++ +     G +  R+    ++ RGL+
Sbjct: 274 VRLSGGAELVEQLLVDEKLKAVPNAVKGLEGMKLLLKYCSIFGLDK-RVSFDLSLARGLD 332

Query: 301 YYTGCVYEAILGFP-------------VMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQN 345
           YYTG +YE +L                   +  +P   GSV GGGRYD L  +   +G+ 
Sbjct: 333 YYTGVIYEGVLKGESATVASPAKTSQQNGEQTNEPATVGSVAGGGRYDNLVGMFDPRGKA 392

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           VP  G SIG+ R+   L++  +++        V +                  +L  AG+
Sbjct: 393 VPCVGVSIGVERIFSVLEARAAASGLKLRTSDVEVYVASAHKGLHEARLKVLNLLWDAGV 452

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +AE     +     QL++ +    PL ++ G  E ++G+++++++    E + ++++  +
Sbjct: 453 KAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKLREVTTRAETNVKLEDLAA 512

Query: 466 WREARVA 472
               R  
Sbjct: 513 EIRRRQQ 519


>gi|206889416|ref|YP_002249587.1| histidyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226737080|sp|B5YHK1|SYH_THEYD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|206741354|gb|ACI20411.1| histidyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 420

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 112/467 (23%), Positives = 186/467 (39%), Gaps = 54/467 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++  L RG  D  +++I +   I +  R I ENY F  I TP++E ++   + + +  D 
Sbjct: 1   MKYSLLRGMQDIFSEQIYLWQHIEEHARKILENYNFQEIRTPIVENAELFLRSIGEDTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K ++  QD  G+ ++LR + TA + R   ++       P + Y IGP+FR E+   GR
Sbjct: 61  VEKEMYVFQDKKGRKVALRPEGTASVVRAYIQHNFFNNPPPQKFYYIGPMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKIG 183
           FRQF Q  V+  G S+   DAE+  M+   LE + I    Y I     K       + + 
Sbjct: 121 FRQFHQIGVECFGVSSSWIDAELIYMLKLFLEKLNINNLTYEINSLGCKRCRPQYRKVLF 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               DK+N+       ID   +F    +++L  +               + +   ++V F
Sbjct: 181 SFLADKVNQL-----CIDCKRRFEKNPLRVLDCK---------VPSCKESLKNTPLIVDF 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D ++            ++ +K  +E+ +                ++  IVRGL+YYT
Sbjct: 227 LCQDCKEHF----------LSLQKELDEMNI-------------SYAVNPKIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E                  +V  GGRYD LV  F G   PA GF+IG+ RLI    
Sbjct: 264 RTVFEVTTT--------MLGAQNAVAAGGRYDDLVELFGGPTTPAAGFAIGMERLIEICS 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +               +      S    + +     LR   I  E       +  +QL+ 
Sbjct: 316 NSLLIKPKKP-----FVYVAYIGSSVEKEAKKVVNFLRNNNIPTETAY-EKLSLKSQLRK 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ADR    + II G  E  + +   K++  G +    +         +
Sbjct: 370 ADRVGANIVIIIGEDEIKKSVYIWKNMKDGSQGEASLNELLELIRRK 416


>gi|117618684|ref|YP_856296.1| histidyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166227941|sp|A0KJ45|SYH_AERHH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|117560091|gb|ABK37039.1| histidyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 425

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 110/506 (21%), Positives = 188/506 (37%), Gaps = 93/506 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC  ++  +  ++   +R +  +YG+  +  P++E +    + +
Sbjct: 1   MAKQ----IQAIRGMNDCLPEQSPVWQKVEQILRQVVASYGYSEVRMPIVEQTHLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  +SLR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLSLRPEGTASCVRAGIEHGLLYNQERRMWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ M+        GI                   
Sbjct: 117 PQKGRYRQFHQFGVELFGINGPDIDAELIMLTHRLWRLFGISEHVTLQLNTLGQSSERAA 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D++   R+                +++L  +   +       GA
Sbjct: 177 YRDALVAYLEQYKDQLDEESQRRMYS------------NPLRVLDSKD--EKVQAILVGA 222

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    +   L  +       L  L++      +    L                  
Sbjct: 223 -------PRLFDHLGEESLAHFEGLKRLLESAGIQYEVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  GQ  PA G
Sbjct: 258 -----VRGLDYYNLTVFEWVTNS--------LGAQGTVCAGGRYDGLVEQLGGQPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE + +       V +        +        + LR A   +R  
Sbjct: 305 FAMGMERLVLMLETLELNGDIRPA---VDVYLAMVGEGTEQAGFQLAERLRDALPDLR-L 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M      NF  QLK AD+    +A+I G  E   G + IK L                  
Sbjct: 361 MSHCGGGNFKKQLKRADKSGAAIALILGETEVQNGEITIKYLR----------------- 403

Query: 469 ARVAQITIPISELVSTVKKILQENKE 494
            +  Q T+ +   ++    +L    E
Sbjct: 404 GQAEQQTVTVDAAIA----LLAAKGE 425


>gi|55379745|ref|YP_137595.1| histidyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|68052895|sp|Q5UXW4|SYH_HALMA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|55232470|gb|AAV47889.1| histidyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 435

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 118/449 (26%), Positives = 194/449 (43%), Gaps = 35/449 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF D   KE++ R   +D++ ++ + YGF  I TP LE ++       +E    + ++S
Sbjct: 6   KGFRDFYPKEMQARRWAMDTLEDVAQRYGFREIGTPALEPTEMYVDKSGEEIV--EELYS 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +D  G+ ++L  +LT  +AR        +  P +     P +R E+   GRFR+F Q +
Sbjct: 64  FEDKGGRKVALTPELTPTVARMFVAKQQELSKPIKWVSTRPFWRYEEPQQGRFREFYQTN 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD  GS+  TADAE+  +  D L  +G+   D+ I +++R IL G+LE      D     
Sbjct: 124 VDIFGSAEPTADAEILAVAVDMLTDLGLTGEDFEIRVSHRDILSGVLESFEADVDVPEAI 183

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R +  RA                 +   D   D    A L+  Q D     L ID E+  
Sbjct: 184 RAVDKRA-----------------KVDHDEYLDALAEAGLSYGQADTFDEMLQIDAEEI- 225

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            E    + G+       + L  + +     G     + +S T  RGL+YYTG V+E    
Sbjct: 226 -ETLGDLTGSEDVRTATDNLQAVLDAAEDFGVRE-HLTVSLTTARGLDYYTGVVFECFDS 283

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              ++         SV GGGRYD L+  F GQ  PA GF+ G + L +  +         
Sbjct: 284 TGEVS--------RSVFGGGRYDDLIEGFGGQPTPAVGFAPGHATLQLLCQRAGVWPAEE 335

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 ++       D+        + LR  G   E  + + ++FG Q+ YAD  N    
Sbjct: 336 LSTDYYVLQV----GDTRPTAARIARDLRERGHVVESDV-ADRSFGAQMGYADGINAETV 390

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +I G  +     + +K++  G+++S  + 
Sbjct: 391 VIVGEQDLENDEVTLKEMDDGEQVSVPLS 419


>gi|331007914|ref|ZP_08330984.1| Histidyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418274|gb|EGG92870.1| Histidyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 423

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 92/474 (19%), Positives = 184/474 (38%), Gaps = 65/474 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   ++      +  ++ +I + Y +  I  P++E +D   + + +  D  
Sbjct: 3   KIQAIRGMNDLLPQQSATWQYLESAVSSILDQYNYKEIRFPIMETTDLFKRSIGEVTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  ++LR + TA   R   ++        + +  GP+FR E+   GR R
Sbjct: 63  EKEMYTFADRNGDSVTLRPEGTASCVRACEQHGLLYNQTQKLWYHGPMFRYERPQKGRLR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q  V+  G      DAE+ ++ A   + + I        +      +R      L  
Sbjct: 123 QFHQIGVETFGFDGPDIDAELLLLTARLWKQLKINHAVVLEINSLGTPASRGRYKAALID 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                  +L+E        D   +     +++L  +                      + 
Sbjct: 183 YLNPLKGQLDE--------DSQRRLSTNPLRILDSKN---------TDTQALLADAPQLH 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+  + +     L +++K                             +++  +VRGL+Y
Sbjct: 226 DFIEDEAKAHFVALTDILKAA-----------------------DIPYRVNQRLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +          +    G+V  GGRY+GLV +  G+   A G ++G+ RL++ 
Sbjct: 263 YDYTVFEWVT--------DQLGAQGTVCAGGRYNGLVEQLGGRPTAAVGLAMGVERLVLL 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR----TAGIRAEMFLGSSKNF 417
           L++L    +N+     + I ++    D +       + LR     A I          +F
Sbjct: 315 LETLNVLPDNVASTPDIYIVSVG---DVMPYALSVAEKLRDDLLDANI---CSHFGGGSF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK-ELSREIKNNESWREAR 470
            NQ+K AD+    +A+I G  E+ + +L +K L  G  + +  ++   +  + R
Sbjct: 369 KNQMKKADKSGANMALIIGEDEKQQQLLTVKYLRSGDPQKTITVEEFITLFKHR 422


>gi|237745512|ref|ZP_04575992.1| histidyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229376863|gb|EEO26954.1| histidyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 454

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 105/498 (21%), Positives = 194/498 (38%), Gaps = 84/498 (16%)

Query: 2   GKKTKLRAEL-PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
            K  K+R  L  RG  D    E  +   + +++ ++ ++YG++ I TP++E +    + L
Sbjct: 5   NKAKKIRKILGIRGMNDILPDESPVWELLENTVESVLKSYGYERIRTPIVEETSLFARGL 64

Query: 61  PD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
               D   K ++S +D  +G  ++LR + TA + R V E+  T     R +  GP+FR+E
Sbjct: 65  GAVTDIVEKEMYSFEDSLNGDQLTLRPECTAGVVRAVLEHNLTYNGSKRLWYTGPMFRHE 124

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQF Q   + VG      DAE+ ++     + +G            +      
Sbjct: 125 RPQRGRYRQFHQIGAEAVGFPGPDIDAELILLCQRLWDDLGLDNIRLELNSIGNAEERNR 184

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           +R  L    E+     D+            D   +     +++L  +             
Sbjct: 185 HRADLIAYFERHKDVLDE------------DAQRRLYSNPLRILDTKNPHMQDM------ 226

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    ++ +L  +       + ++++                         +    
Sbjct: 227 ---VNAAPKLLDYLDRESLDHFEGVKKILRRN-----------------------NIPFT 260

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRG++YY   V+E I         ++    G+V GGGRYD L   F G+  P+ G
Sbjct: 261 INPRLVRGMDYYNRTVFEWI--------SEELGAQGTVCGGGRYDPLFEMFGGKFTPSCG 312

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F++G+ RLI  +K+     ++ K      +       D+L +  +  + LR  G+   ++
Sbjct: 313 FAMGVERLIELMKAKGGIDSSKKA----DVFIAHQGEDALLEATVLAEALRNTGLDVILY 368

Query: 411 ---LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
              L S  +F  Q+K AD      AI+ G  E S G   +K L                 
Sbjct: 369 CASLNSGGSFKAQMKRADESGATFAILIGEDEISSGQASVKALR--------------AE 414

Query: 468 EARVAQITIPISELVSTV 485
            A   Q ++P  ++   +
Sbjct: 415 NAGNNQTSVPFEKVADYL 432


>gi|125624984|ref|YP_001033467.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166228557|sp|A2RN96|SYH_LACLM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|124493792|emb|CAL98784.1| HisS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071783|gb|ADJ61183.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 430

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 105/476 (22%), Positives = 184/476 (38%), Gaps = 60/476 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G AD    E      I +  R ++ +Y F  I TP+ E  +   +   +  D 
Sbjct: 1   MKLQKPKGTADLLPAETAKWQYIEEIARGVFNDYNFKEIRTPMFESYELFSRATGETSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++  +D  G+ I+LR + TA   R   EN         P + +   P+FR E+   
Sbjct: 61  VTKEMYDFEDKGGRHIALRPEGTASAVRAYIENKLYAPEVVKPVKLWYDAPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR RQF Q  V+ +G      D E+  M       +GI       +    + +RK     
Sbjct: 121 GRLRQFHQFGVECLGLKNPAVDVEIIAMADTLFRQLGISGVKLSLNTLGDMESRKAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L       +++L+E        D   +     +++L  +   D +           +   
Sbjct: 181 LIDYLTPFENQLSE--------DSRRRLNENPLRVLDSKEAEDIA---------IVKNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+   +    E+  L++                         +    I S +VRG
Sbjct: 224 AILDYLNETSKAYFEEVKALLEAL-----------------------NIEYTIDSNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I+ F             +V GGGRYDGLV  F G   PA GF +GI RL
Sbjct: 261 LDYYNDTIFEFIVNFDGKE--------LTVCGGGRYDGLVEYFDGPATPAFGFGLGIERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++  +  E +    + +  V I  M   ++   +     + LR    + E    S++  G
Sbjct: 313 LMIAEKQEINFIPEETLD-VYIAVMGEKANL--EATKLAESLREQAFKVERDF-SNRKLG 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            Q K A++    L I  G  E   G +++K     K++   ++           +I
Sbjct: 369 AQFKTAEKLGAELIITLGEDEVRTGQIKVKHNQTRKQVETTLQAVHESFAPIFEEI 424


>gi|154491511|ref|ZP_02031137.1| hypothetical protein PARMER_01122 [Parabacteroides merdae ATCC
           43184]
 gi|154088312|gb|EDN87357.1| hypothetical protein PARMER_01122 [Parabacteroides merdae ATCC
           43184]
          Length = 451

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 138/483 (28%), Positives = 220/483 (45%), Gaps = 61/483 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I ++IR +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 3   KPSIPKGTRDFSPEEMAKRNYIFNTIREVYHLYGFQQIETPAMENLSTLMGKYGEEGD-- 60

Query: 67  NKGVFSLQDDD-------GQWIS---------------LRYDLTAPLARYVAENFDTIVF 104
            K +F + +          + +S               LRYDLT P ARYV ++ + I F
Sbjct: 61  -KLLFKILNSGDCFSGITDEELSERNAVRFGMKACEKGLRYDLTVPFARYVVQHRNDIAF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  +M +     GI    
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDGDVVGSDSLVNEVELIQIMDEVFRRFGI---R 176

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E IG     + ++ + +  AIDKLDK GL  V   L         
Sbjct: 177 VCIKMNNRKILSGIAEIIG-----EADKIVDITVAIDKLDKIGLDNVNDEL--------- 222

Query: 225 DFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
              +   L+   I  +   + +     + +  L + +  +    KG  E+  I + + K 
Sbjct: 223 ---RSKELSEGAIARLQPIIMLKGTNREKLAVLKKELAASEIAMKGIAEMEFILDRIEKL 279

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
              ++ +++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 280 ELTAD-LELDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +   G S G  R+   L  LE    +  +   +L        ++          +R 
Sbjct: 330 MDGMSGVGISFGADRIFDVLNQLELYPVDSLKTTQLLFVNFGEKEEN--YLLPLISKVRA 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIR E++  S+K    Q+ YAD +  P   I G  E + G + +K++  G++    ++ 
Sbjct: 388 AGIRTELYPESAK-MKKQMGYADTKKIPFVAIVGENEINEGKINLKNMLTGEQSLVTLEE 446

Query: 463 NES 465
              
Sbjct: 447 LIE 449


>gi|110834720|ref|YP_693579.1| histidyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123149360|sp|Q0VNE1|SYH_ALCBS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|110647831|emb|CAL17307.1| Histidyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 422

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 104/478 (21%), Positives = 187/478 (39%), Gaps = 76/478 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    +    RG  D   ++  +   +   +  +  +YG+  I  P++E +D   + +
Sbjct: 1   MSK----KITSIRGMNDILPEQTGLWQWLEAKVGAVLASYGYQEIRMPIVEQTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   ++        R +  GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFDDRNGDSLTLRPEGTASCVRACEQHGLLYNQTQRLWYAGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ ++ A   +A+G             D      
Sbjct: 117 PQAGRYRQFHQIGVETFGMTGPDIDAEVILLTARLWKALGLEDKVVLELNSLGDSADRAR 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   L+      D             D   +     +++L  +           G 
Sbjct: 177 YRDALVDYLKAHFDDLD------------GDSQKRLERSPLRVLDSKD---------TGT 215

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +    +  +L+ +       L  L+  +                           K
Sbjct: 216 REVLKGAPQLADYLNDEAVAHFEGLKALLDASGIA-----------------------YK 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 253 VNPYLVRGLDYYGKTVFEWVT--------DALGAQGTVCAGGRYDGLVEQLGGKPTPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++GI RLI+ ++         +   PV +  M    D L+     ++ LR A  G RA 
Sbjct: 305 FAMGIERLILLIEQE-----RPELSAPVDVYVMAMG-DVLAPTMALSEHLRDALPG-RAI 357

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNES 465
                  +F +Q+K ADR    + +I G  E + G++ +K L  +G+++     +  +
Sbjct: 358 QLHCGGGSFKSQMKKADRSGAAVGLIMGEDELASGVVTVKPLRGQGEQVQVAQGDVAN 415


>gi|325272134|ref|ZP_08138566.1| histidyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324102730|gb|EGC00145.1| histidyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 429

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 103/487 (21%), Positives = 186/487 (38%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + + YG+  I TP++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQSPLWRYFEGTVAGLLDTYGYSQIRTPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNE 118
            +  D   K +++ +D +G  ++LR + TA   R V E+  T      + + IG +FR+E
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLEHGITGNGQVQKLWYIGQMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           +   GR+RQF Q  V+         DAE+ M+       +G                   
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIMLTWRLWGLLGIQDAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +       D    
Sbjct: 177 RYRDALVEFLSARLEQLDE------------DSQRRLKSNPLRILDSK-------DQNTQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L          L   ++                             
Sbjct: 218 AVLVG--APKLEDYLDEPSRVHFEGLKARLEAA-----------------------GIPF 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I++ +VRGL+YY+  V+E +          K    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINTKLVRGLDYYSKTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQMGGKPTTGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++GI RLI+ L++L     +I     V +      ++        ++ LR    G+R 
Sbjct: 305 GFAMGIERLILLLETLGKVPESISRTVDVYLCAFGEQAEL--AGLRLSEGLRDRLPGLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
            +  G   +F +Q K AD+     A+I G  E ++ ++ +K L  +G++ +         
Sbjct: 363 AVNAGGG-SFKSQFKKADKSGALFALILGDDELAKQVIGLKPLRGQGEQQNIAWDALAEH 421

Query: 467 REARVAQ 473
            E  +AQ
Sbjct: 422 LETAIAQ 428


>gi|325280514|ref|YP_004253056.1| Histidyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312323|gb|ADY32876.1| Histidyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 454

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 137/479 (28%), Positives = 226/479 (47%), Gaps = 55/479 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED--- 64
             +P+G  D   + +  RN I D+I+++++ YG+ P+ETP +E   +L GK+  + D   
Sbjct: 5   PSIPKGTRDYSPEIMVKRNYIFDTIKSVFKLYGYMPLETPAMENLSTLMGKYGEEGDKLL 64

Query: 65  --RPNKGVFSLQDDDGQWI--------------SLRYDLTAPLARYVAENFDTIVFPCRT 108
               N G F     D + +               LRYDLT P AR+V ++   + FP + 
Sbjct: 65  FKILNSGDFIGNISDQELLEKNSIKLTNKISEKGLRYDLTVPFARFVVQHQSELTFPFKR 124

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y+I PV+R ++   GR+R+F QCDVD VGS +   + E+  M+ +    + IK     + 
Sbjct: 125 YQIQPVWRADRPQKGRYREFYQCDVDVVGSDSLLHEVELIQMVDEVYRRLKIK---VRLL 181

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           INNRKIL GI E IG        +   +  AIDK+DK GL  V   L E           
Sbjct: 182 INNRKILAGIAEIIGYPD-----QLTDITVAIDKMDKIGLDKVNAELREK---------- 226

Query: 229 GANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
              +T E I  +   L+++    + + +L  +++ +  G KG  EL ++ + ++     +
Sbjct: 227 --GITEEAIVKLQPILNLEGSNSEKLEKLKTILQDSPIGLKGVEELSIVFDYLKDVDIRT 284

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             IK+  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F  +N+
Sbjct: 285 -EIKLDLTLARGLSYYTGAIFEV---------KALDVQIGSITGGGRYDDLTGIFGLKNM 334

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
              G S G  R+   +  L+    +      +L        +         + LR AGI 
Sbjct: 335 SGVGISFGADRIFDVMNQLDLFPKDNMTTTQILFVNFGKQEER--YCLPLLKQLREAGIN 392

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           AE++  ++K    Q+ YAD++  P   + G  E   G++ +K++  G++ +  ++    
Sbjct: 393 AEIYPEAAK-MKKQMTYADKKEIPFVALIGENEMQEGIISLKNMLSGEQHNVTMEELVE 450


>gi|319794357|ref|YP_004155997.1| histidyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315596820|gb|ADU37886.1| histidyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 436

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 96/470 (20%), Positives = 187/470 (39%), Gaps = 59/470 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    E      +  ++R     + +  + TP+LE++    + + +  D  
Sbjct: 4   KLNAVKGMNDILPPESARWEWLEATVREQMGRFAYRNVRTPILEHTALFVRGIGEVTDIV 63

Query: 67  NKGVFSLQDDDG-----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            K +++ +D        + +++R + TA L R V E+      P R +  GP+FR EK  
Sbjct: 64  EKEMYAFEDRSDKHGQAEHLAMRPENTAGLVRAVIEHNMLYDGPRRLWYTGPMFRREKPQ 123

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+RQF Q   + +G +    DAE+ ++ +   +A+G+      +    +     +   
Sbjct: 124 RGRYRQFHQIGAEALGFAGPDVDAELILLASALWKAIGLTDVRLELNSLGQPAERALHRA 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             +   ++  ++L      D   +     +++L  +                 E    + 
Sbjct: 184 QLIAHFEQHADKLD----EDGKRRLHSNPLRILDTKNPAMKD---------VVESAPKLS 230

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +       L  +++                              I+  +VRGL+Y
Sbjct: 231 EFLGAESRAHFEGLQAILQAN-----------------------GITYTINPRLVRGLDY 267

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +          +    G+V GGGRYDGL+ +  G+  PA G+++G+ R++  
Sbjct: 268 YNLTVFEFVT--------DRLGAQGTVCGGGRYDGLIEQIGGKPAPAVGWAMGVERVLDL 319

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF---LGSSKNFG 418
           LK   +           ++     D+ ++       Q LR AG+R +M         +F 
Sbjct: 320 LKEQGADIPVPAPDAYAVV----PDAGAMPLVLRTLQQLREAGVRVQMHGATAEGLASFK 375

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA--KGKELSREIKNNESW 466
           +Q+K AD      A+I G  E +RG + +K L    G +++R +    +W
Sbjct: 376 SQMKKADNSGATYALIFGADELARGEVTLKSLRDGSGAQIARPLAEVATW 425


>gi|256959284|ref|ZP_05563455.1| histidyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300861096|ref|ZP_07107183.1| histidine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|256949780|gb|EEU66412.1| histidyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300850135|gb|EFK77885.1| histidine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|315034526|gb|EFT46458.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0027]
          Length = 433

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 95/459 (20%), Positives = 187/459 (40%), Gaps = 50/459 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + ++ R I+++Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQKPKGTNDILPGTSEKWQFVEETARLIFKDYQYQEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   EN         P +TY +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVENKLYGPEYTKPYKTYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS     D E+  M  D  + +GI++    I     K       + 
Sbjct: 121 GRLRQFHQIGVEAFGSENPALDVEIMAMALDFFKQLGIQQIKLVINSLGDKETRATYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +     L    + D   +     +++L  + + D          +   +   ++ 
Sbjct: 181 LIDYLEPHMAEL----SEDSQRRLHENPLRVLDSKDKKDK---------VIVAEAPSILE 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+   +     + +++       +  + +                       VRGL+YY
Sbjct: 228 YLNEPSKAHFEAVTDMLDLLEIPYEIDSNM-----------------------VRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E       M+E  K     ++  GGRY+GLV    G + P  GF +GI R+++ +
Sbjct: 265 THTIFEI------MSEAPKMGAQSTICAGGRYNGLVEELGGPDTPGFGFGMGIERVLLTM 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ E     + E+       +   S++        Q +R  G  A+     ++    Q K
Sbjct: 319 EAEEVVIPALSELDA---YVVGIGSETNVAALQLVQSIRNFGFSADRDY-MNRKPKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD+    L +  G  E + G++ +K +A  +E +  + 
Sbjct: 375 TADKLQAKLVLTIGENELNEGIVNVKSMATREEKAFPLS 413


>gi|241764496|ref|ZP_04762517.1| histidyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366080|gb|EER60677.1| histidyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 433

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 99/475 (20%), Positives = 185/475 (38%), Gaps = 59/475 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +L A   +G  D    +      +   +R + E Y +  I TP++E +    + L
Sbjct: 1   MSKLERLTA--VKGMNDILPPDSARWEWLESKVRALMERYAYRNIRTPIVEPTPLFVRGL 58

Query: 61  PD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K ++S +D  +G+ ++LR + TA + R VAE+        R Y +GP+FR+E
Sbjct: 59  GEVTDIVEKEMYSFEDRLNGEQLTLRPEATAGVVRAVAEHSMLYDGGKRLYYMGPMFRHE 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR+RQF Q   + +G      DAE+ ++     + +G++                 
Sbjct: 119 RPQRGRYRQFHQIGAEALGFPGAELDAELILLANALWKELGLQNVRLE------------ 166

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  +G   + K +   ++            +  + L                    E   
Sbjct: 167 LNSLGQPEERKAHRAALISYLEQHSHALDEEARRRLHSNPLR-ILDTKNPAMQSIVEAAP 225

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ FL  +     + +  ++                               ++  +VRG
Sbjct: 226 RLIDFLGDESLGHFNVVKAILDANGVA-----------------------WSVNPRLVRG 262

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           ++YY   V+E +          +    G++ GGGRYD L+ +  G+  PA G+++G+ R+
Sbjct: 263 MDYYNLTVFEFVT--------DQLGSQGTICGGGRYDYLIEQIGGKAAPAVGWALGVERV 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF----LGSS 414
           +  LK   S+          +I     D+ +L       + LR+ G+  +M      G  
Sbjct: 315 LELLKEQGSAVPAPVPDAYAVI----PDAAALPLAMSTIERLRSHGVSVQMHGASPSGEG 370

Query: 415 -KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA--KGKELSREIKNNESW 466
             +  +Q K AD      A++ G  E +RGM+  K L    G ++ R +     W
Sbjct: 371 MGSMKSQFKKADASGARHALVFGADELARGMVLCKALRDGSGAQVERSLGGVSEW 425


>gi|227504994|ref|ZP_03935043.1| histidyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198358|gb|EEI78406.1| histidyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 426

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 102/483 (21%), Positives = 189/483 (39%), Gaps = 68/483 (14%)

Query: 1   MGKKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K + +A   P+G  D    +     ++ +++ +     GF  IE P+ E +    + 
Sbjct: 1   MSDKKQFKALSAPKGVPDYIPPQSATFYKVRENLVHQAHLSGFQHIELPIFEDTTLFARG 60

Query: 60  LPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRN 117
           + +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR 
Sbjct: 61  VGESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRSVIEHNLDRGQLPVKLNYFGPFFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGI 169
           E+   GR+RQ  Q  V+ +G      DAE+  +   +  ++G+ +         D++   
Sbjct: 121 ERPQAGRYRQLQQVGVEAIGVDDPALDAEIIALADRSFRSLGLSKFRLELTSLGDHNCRP 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L K+ L  + +   ++  LR +D         V+  L +            
Sbjct: 181 AYREKLQDFLFKLDLDEETRKRAQINPLRVLDDKRP----EVQEQLVD------------ 224

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                    +M+  L+ +       +  L+                              
Sbjct: 225 -------APLMLDHLNEECRTHFETVTGLLDD-----------------------MGIEY 254

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +   
Sbjct: 255 TINPRMVRGLDYYTKTCFEFVHPL--------LGAQSGIGGGGRYDGLMAQLGGQELSGI 306

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G+ +G+ R I+AL++     + + +   V    +  D+            LR AGI A+M
Sbjct: 307 GYGLGVDRTILALEAEGIELDGVDQRVAVFGVALGADAKRRMAG--IINDLRNAGISADM 364

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             G  +     +K ADR     A++ G  E   G++ +KDLA  ++    I         
Sbjct: 365 SFG-DRGLKGAMKGADRAGARFALVLGEQELENGVVAVKDLAAHEQNDVAIDALVEHLRN 423

Query: 470 RVA 472
           ++ 
Sbjct: 424 QLN 426


>gi|294673703|ref|YP_003574319.1| histidine--tRNA ligase [Prevotella ruminicola 23]
 gi|294472475|gb|ADE81864.1| histidine--tRNA ligase [Prevotella ruminicola 23]
          Length = 452

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 137/482 (28%), Positives = 218/482 (45%), Gaps = 61/482 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR 65
           ++  +P+G  D    E+  RN I D+I+ +Y+ YGF  IETP +E   +L GK+  + D 
Sbjct: 1   MKPSIPKGTRDFSPMEMAKRNYIFDTIKQVYQLYGFQQIETPAMETLGTLMGKYGEEGD- 59

Query: 66  PNKGVFSLQDDDG-------QWIS---------------LRYDLTAPLARYVAENFDTIV 103
             K +F + +          + ++               LRYDLT P ARYV  + + + 
Sbjct: 60  --KLLFKVLNSGDYLSKVTPEELAERNSLRLAAKLCEKGLRYDLTVPFARYVVMHREELQ 117

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
            P + Y++ PV+R ++   GR+R+F Q D D VGS +   + E+  ++       G+   
Sbjct: 118 LPFKRYQMQPVWRADRPQKGRYREFWQFDGDIVGSDSLLNEVELMQIVDTVFSRFGV--- 174

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
              I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E      
Sbjct: 175 RVQIKINNRKILTGIAEVIGAAEK-----IVDITVAIDKLDKIGLDNVNQELRED----- 224

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
                   L+ EQI+ +   +S++   ++ ++ + E++  +  G KG  E   I + ++ 
Sbjct: 225 -------GLSDEQIEKLQPIISLEGTNDEKLNTIAEVLATSETGLKGVEETRFILDTLKT 277

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            G   N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F
Sbjct: 278 LG-LKNEIQLDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGIF 327

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
               +   G S G+ R+   L +L+    +      +L           +         R
Sbjct: 328 GMPGISGVGISFGVDRIFDVLNALDCYPKDATNGTQLLFINFGEKET--AYCLPSVAKAR 385

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AGI  E+F  S+K    Q+ YA+ +  P   + G  E +   L +K++  G++    I 
Sbjct: 386 EAGIHTEIFPDSTK-MKKQMSYANAKQIPFVALAGENEMAADKLTLKNMETGEQSLITID 444

Query: 462 NN 463
             
Sbjct: 445 EI 446


>gi|119582425|gb|EAW62021.1| histidyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|193784950|dbj|BAG54103.1| unnamed protein product [Homo sapiens]
          Length = 440

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 113/456 (24%), Positives = 200/456 (43%), Gaps = 26/456 (5%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           + +R ++ D I   ++ +G + I+TP+ E  ++L     ++   +K ++ L+D  G+ +S
Sbjct: 1   MAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGED---SKLIYDLKDQGGELLS 57

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           LRYDLT P ARY+A N  T +             N     GR+R+F QCD D  G+    
Sbjct: 58  LRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRGRYREFYQCDFDIAGNFD-P 115

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
              +   +         ++  D+ + +N+R+ILDG+    G+       +   +  ++DK
Sbjct: 116 MIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDS----KFRTICSSVDK 171

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL---YELV 259
           LDK   + VK            +      L  E  D +  ++      S+ E       +
Sbjct: 172 LDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKL 220

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
                  +G  +L ++ E +   G   ++I    ++ RGL+YYTG +YEA+L        
Sbjct: 221 SQNKQALEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAG 279

Query: 320 QKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+   ++    +         
Sbjct: 280 EEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTE 339

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +         L +       L  AGI+AE+    +    NQL+Y +    PL  I G 
Sbjct: 340 TQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGE 399

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            E   G+++++ +   +E+    ++     + R  Q
Sbjct: 400 QELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 435


>gi|69247936|ref|ZP_00604552.1| Histidyl-tRNA synthetase, class IIa [Enterococcus faecium DO]
 gi|257880300|ref|ZP_05659953.1| histidyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257882155|ref|ZP_05661808.1| histidyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257885347|ref|ZP_05665000.1| histidyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257890959|ref|ZP_05670612.1| histidyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894214|ref|ZP_05673867.1| histidyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614752|ref|ZP_05712522.1| histidyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260562396|ref|ZP_05832910.1| histidyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293552796|ref|ZP_06673456.1| histidyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293560708|ref|ZP_06677187.1| histidyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293566142|ref|ZP_06678545.1| histidyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294618767|ref|ZP_06698294.1| histidyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294622236|ref|ZP_06701296.1| histidyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314938573|ref|ZP_07845857.1| histidyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314940918|ref|ZP_07847824.1| histidyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314948061|ref|ZP_07851463.1| histidyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314952054|ref|ZP_07855077.1| histidyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314991936|ref|ZP_07857391.1| histidyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314995194|ref|ZP_07860308.1| histidyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68194638|gb|EAN09125.1| Histidyl-tRNA synthetase, class IIa [Enterococcus faecium DO]
 gi|257814528|gb|EEV43286.1| histidyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817813|gb|EEV45141.1| histidyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257821203|gb|EEV48333.1| histidyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257827319|gb|EEV53945.1| histidyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830593|gb|EEV57200.1| histidyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260073320|gb|EEW61661.1| histidyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291590068|gb|EFF21860.1| histidyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291594955|gb|EFF26305.1| histidyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291598278|gb|EFF29371.1| histidyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291603043|gb|EFF33235.1| histidyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291605299|gb|EFF34754.1| histidyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590603|gb|EFR69448.1| histidyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313593520|gb|EFR72365.1| histidyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595844|gb|EFR74689.1| histidyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313600276|gb|EFR79119.1| histidyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313642130|gb|EFS06710.1| histidyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645477|gb|EFS10057.1| histidyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 430

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 99/478 (20%), Positives = 193/478 (40%), Gaps = 58/478 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + ++ R ++ +Y ++ + TP+ E+ + + + + D  D 
Sbjct: 1   MSFQRPKGTNDILPGESEKWQFVEETARLLFRDYQYNEMRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   E+         P +T+ +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGERHVTLRPEGTAPIVRSFVEHKLFGPEYAKPFKTFYMGPMFRYERPQK 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR RQF Q  V+  GS     D E  +M  D  + +GI +    I        R+     
Sbjct: 121 GRLRQFHQIGVEAFGSENPATDVESMVMALDFFKQLGITQIRLVINSLGDKETRQAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L    L  + +L+E        D   +     +++L  + + D              +  
Sbjct: 181 LIDYLLPFESELSE--------DSKRRLHENPLRVLDSKDKRDQKF---------VAEAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +LS   +K    +  ++       +  + +                       VRG
Sbjct: 224 SILDYLSEPAQKHFDTVVSMLDALAVPYEIDSNM-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT  ++E +   P M          ++  GGRYD LV    G + P  GF++GI RL
Sbjct: 261 LDYYTHTIFEIMSDAPKM------GAQATICAGGRYDNLVEELGGPSTPGFGFAMGIERL 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +++ E       E+       +    ++  +     Q +R  G  A+     ++   
Sbjct: 315 LLTMEAEEVVIPAFNELDA---YVVALGDETNIEALKVVQAIRNFGFSADRDF-MNRKAK 370

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            Q K AD+ N  L ++ G  E +   + +K +A  KE S  ++      +    ++T+
Sbjct: 371 AQFKTADKANAKLVLVIGEDELASQTINVKAMASRKEKSFPLEEIYEHFDEVYDEMTL 428


>gi|42522656|ref|NP_968036.1| histidyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|39573852|emb|CAE79029.1| hisS [Bdellovibrio bacteriovorus HD100]
          Length = 460

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 99/465 (21%), Positives = 175/465 (37%), Gaps = 62/465 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D   ++  +   + +S       YG+  IETP+ E+SD   + L +  D  
Sbjct: 48  KIQRVRGTRDLLPEDSILFRFVEESAYEKALLYGYGEIETPIFEFSDVFHRTLGETSDVV 107

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           NK  +   D  G+ ++LR + TA +AR           P + Y  GP+FR E+   GR+R
Sbjct: 108 NKETYDFTDRGGESLTLRPEGTAGVARAFISEGMMQNLPLKFYYSGPMFRYERPQKGRYR 167

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q   + +G  +  AD E   +  D L+ +GI  +     +      +R      L  
Sbjct: 168 QFYQLGAECLGYESPLADVETISLAWDLLKKIGISDDCTLEINTLGDAESRAAYRDTLVN 227

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        D   +     +++L  +   D   +              + 
Sbjct: 228 YFTAHKDQLSE--------DSKMRLEKNPLRILDSKDEGDKKLNA---------NAPKLE 270

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L+   +    ++   ++      K  + L                       VRGL+Y
Sbjct: 271 QSLNQTSQDFFKKVIAGIEKLGIPYKINDHL-----------------------VRGLDY 307

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E            K    G+V  GGRYDGL+    G   P  G++ GI RL   
Sbjct: 308 YCHTVFEFTTT--------KLGAQGTVLAGGRYDGLIETMGGPKTPGVGWAAGIDRLA-- 357

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
               + +   +     V+I  +  D     +       +R  G + E FL  S   G ++
Sbjct: 358 ----DLTPKELATKKEVIIAVVGADEQGEDESVKVAHEMRVRGFKTENFL--SGKMGKKM 411

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           + A++     A+I G  E +   + +K+   G++        +++
Sbjct: 412 QKANKLGAHYALILGGNEVTNKTVTVKNFTTGEQKEITRAELQTY 456


>gi|302878619|ref|YP_003847183.1| histidyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302581408|gb|ADL55419.1| histidyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 424

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 99/469 (21%), Positives = 185/469 (39%), Gaps = 51/469 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    E  +       +R+   +YG+  I  PL+E +    + + +  D  
Sbjct: 5   TLQAVRGMNDILPDEAELWLWFEGVVRDWLASYGYRNIRMPLVEPTSLFCRAIGEVTDIV 64

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S +D  +G  ++LR + TA   R V ++      P R Y  GP+FR+E+   GR+
Sbjct: 65  EKEMYSFEDSLNGDQLTLRPEGTASCVRAVLQHNLLYNAPQRLYYSGPMFRHERPQKGRY 124

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+ +G +    DAE  +M A   + +G+                  L  +G  
Sbjct: 125 RQFHQVGVEALGFAGPDIDAEQILMCARLWKKLGLTDVTLQ------------LNTLGDV 172

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              + +   ++       +    + V+ L                         ++   +
Sbjct: 173 ESRQRHRAKLIAYFEQNKELMDAEAVRRLHSNPL-------------------RILDSKN 213

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             +++ +     L+      E   +    +  ++ + G      +I+  +VRGL+YY   
Sbjct: 214 PAMQELIEAAPRLMD--ELDEAALSHFAAVQAILTQHG---VAFEINPRLVRGLDYYNRT 268

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G++  GGRYDGLV +  G+  PA GF++GI RL+V L+  
Sbjct: 269 VFEWVTT--------RLGAQGTICAGGRYDGLVEQIGGKPAPAMGFAMGIERLLVLLQEA 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                       V +  +     +        + LR  G+R  M  G   +F +Q+K AD
Sbjct: 321 G----MALPKPQVDVYVVHQGELAARLASSVAEQLRDYGLRVVMHCGGG-SFKSQMKKAD 375

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                +A++ G  E     + +K +  G +    ++N  +     + Q 
Sbjct: 376 ASGACVAVVIGDDEAQSNEVSVKPMQGGAQERVSVQNLATTINKLIKQE 424


>gi|312137400|ref|YP_004004737.1| histidyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311225119|gb|ADP77975.1| histidyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 423

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 110/462 (23%), Positives = 199/462 (43%), Gaps = 45/462 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRG  D   +++ +R  +   +RN++E YG+  I+TP+ E+         +E   
Sbjct: 1   MELRKPRGTRDFLFEDMELRKNVEMKLRNVFERYGYREIKTPIFEHLKLFTIKSGEE--I 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + ++  +D  G+ ++LR +LTAP+AR           P + Y  G  FR E+   GRFR
Sbjct: 59  KEQMYHFKDKGGRNLALRPELTAPIARLYVNKLQRFPKPIKMYYFGSCFRYERPQAGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   + +G  +  A+AE   +  D L+ +G+K  ++ I I +  I+ G+LE+ G+ G
Sbjct: 119 QFWQFGCELIGGKSPEAEAETIALAYDCLKELGLK--NFKIHIGHMGIVRGMLEENGVKG 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + + +                      L+ +G  +    +    +  SE  +++ S + +
Sbjct: 177 EKQDHIMT-------------------LIDKGDKEELSRYLNEISFPSELQELLFSLIEM 217

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +  + +    + G     +   EL  +  L+   G       +   I RGL+YYTG V
Sbjct: 218 KGDSKILDEILDIVGYRRSVEAIQELKNLESLLEVFGVK--NYLMDPGIARGLDYYTGIV 275

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E  +                + GGG Y  L+  F G+ V +TGF+ G  RL+ A     
Sbjct: 276 FEIYI------------SKTQICGGGTY-NLIELFGGEKVESTGFAFGFDRLVEA----- 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              N  ++     +       ++        Q +R +GI A++ L S +  G  L YAD 
Sbjct: 318 -VGNKTEKFSFADVFVAPVSDETREAAFKIAQKIRKSGISADVDL-SRRKLGKLLSYADH 375

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                 II G  E  +  + +KD+  G++   +I +   +  
Sbjct: 376 LGVKYTIIVGKKELKQKRVTVKDMESGEQKEVQIDDLSDYLR 417


>gi|229545446|ref|ZP_04434171.1| histidyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256619445|ref|ZP_05476291.1| histidyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256853486|ref|ZP_05558856.1| histidyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|307275910|ref|ZP_07557043.1| histidyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307295913|ref|ZP_07575745.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|229309362|gb|EEN75349.1| histidyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256598972|gb|EEU18148.1| histidyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256711945|gb|EEU26983.1| histidyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|306496244|gb|EFM65823.1| histidyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306507240|gb|EFM76377.1| histidyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|315028897|gb|EFT40829.1| histidyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 433

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 95/459 (20%), Positives = 187/459 (40%), Gaps = 50/459 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + ++ R I+++Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQKPKGTNDILPGTSEKWQFVEETARLIFKDYQYQEIRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   EN         P +TY +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVENKLYGPEYTKPYKTYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  V+  GS     D E+  M  D  + +GI++    I     K       + 
Sbjct: 121 GRLRQFHQIGVEAFGSENPALDVEIMAMALDFFKQLGIQQIKLVINSLGDKETRATYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +     L    + D   +     +++L  + + D          +   +   ++ 
Sbjct: 181 LIDYLEPHMAEL----SEDSQRRLHENPLRVLDSKDKKDK---------VIVAEAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+   +     + +++       +  + +                       VRGL+YY
Sbjct: 228 YLNEPSKAHFEAVTDMLDLLEIPYEIDSNM-----------------------VRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E       M+E  K     ++  GGRY+GLV    G + P  GF +GI R+++ +
Sbjct: 265 THTIFEI------MSEAPKMGAQSTICAGGRYNGLVEELGGPDTPGFGFGMGIERVLLTM 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ E     + E+       +   S++        Q +R  G  A+     ++    Q K
Sbjct: 319 EAEEVVIPALSELDA---YVVGIGSETNITALQLVQSIRNFGFSADRDY-MNRKPKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AD+    L +  G  E + G++ +K +A  +E +  + 
Sbjct: 375 TADKLQAKLVLTIGENELNEGIVNVKSMATREEKAFPLS 413


>gi|319941511|ref|ZP_08015838.1| histidyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804985|gb|EFW01824.1| histidyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 445

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 106/497 (21%), Positives = 193/497 (38%), Gaps = 74/497 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+   +    +G  D   ++  I   +  +  ++  +YG+  I TP+LE +    + +
Sbjct: 14  MAKE---KFTGVKGMNDMLPQDAPIWQYVQKTCVDVLSSYGYQEIRTPILENTRVFTRGV 70

Query: 61  PD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K ++S  D  +G  ++LR + T+ + R V E+        R +  GP+FR+E
Sbjct: 71  GEVTDIVEKEMYSFTDSMNGDQLTLRPECTSAVVRAVNEHNLLYGTTQRLWYCGPMFRHE 130

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKI 174
           +   GR+RQF Q   + +G +    DAE+ MM+A   +A+G+      +        R+ 
Sbjct: 131 RPQRGRYRQFHQLGAEALGMAGPDIDAEIIMMLARMWKALGVGPVKLEMNTLGAQEERQK 190

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D+L+E        D L +     +++L  +                 
Sbjct: 191 HREALIAYFEAHKDQLDE--------DALRRLYTNPLRILDTKNPDMQG---------LV 233

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +    ++ +L  +    +  L ELV                               I+  
Sbjct: 234 DAAPKLLDYLGEESRAFLSRLEELVSSA-----------------------GIEYSINPR 270

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E I          K    G++ GGGRYD LV    G+  P  GF++G
Sbjct: 271 LVRGLDYYNHTVFEWIT--------DKLGAQGTICGGGRYDPLVEMLGGRPAPGVGFAMG 322

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + R+I  ++ +        +     +  + H  +S +K  +  + +R  GIR     G +
Sbjct: 323 MERVIELMREVGQVP----KASQTDVYVLHHGGESQAKAMLLAETMRDRGIRVVTHPGEA 378

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +  +Q+K AD      A+     E ++G + IK L   +                  Q 
Sbjct: 379 -SIKSQMKKADASGAEFAVFATEDELAQGTVGIKALRAHE------------HAPFAEQT 425

Query: 475 TIPISELVSTVKKILQE 491
            +  +E    V + L  
Sbjct: 426 LVATAEAADKVAEALAA 442


>gi|225440069|ref|XP_002277086.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 554

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 119/460 (25%), Positives = 201/460 (43%), Gaps = 38/460 (8%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+    PRG  D P +++R+RN + +  R +  ++GF+ ++ P+LE      +   +E 
Sbjct: 133 QKIDVNPPRGTRDFPPEDMRLRNWLFNHFREVSRSFGFEEVDFPVLESEALFIRKAGEEI 192

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           R    ++  +D   + ++LR +LT  LAR V +   ++  P + + +G  +R E+   GR
Sbjct: 193 RD--QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGR 250

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q ++D +G     A+AE+   +    + VGI  +D    +++RK+L  +L    +
Sbjct: 251 RREHYQWNMDIIGVPEVMAEAELISSIVTFFKRVGITASDVGFKVSSRKVLQEVLRCYSI 310

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                 N    V   IDK++K  +  +   L                ++ E I  ++  L
Sbjct: 311 PE----NLFGKVCVIIDKMEKIPIDEITKELK------------SLGMSEEAIKDLLQVL 354

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           SI     + E+        A  +   +L  +  L  K GY S  I+  +++VRGL YYTG
Sbjct: 355 SIKSLTKLEEIL------GAAGEAVADLKQLFSLAEKFGY-SEWIQFDASVVRGLAYYTG 407

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E            +     ++ GGGRYD L+S F G +VPA GF  G + +I  LK 
Sbjct: 408 IVFEGF---------DREGKLRAICGGGRYDRLLSTFGGDDVPACGFGFGDAVIIELLKE 458

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                    +   V       D             LR  G   ++ L  SK      K A
Sbjct: 459 KGLLPELSLQ---VENIVCALDHYLQGAAAAVATRLREKGQSVDLVL-ESKPLKWVFKRA 514

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            R N    I+ G  E  RGM+ +K L+ G++   ++   E
Sbjct: 515 ARTNAQRLILVGNSEWQRGMVSVKILSSGEQYEIKLDELE 554


>gi|257888147|ref|ZP_05667800.1| histidyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257899578|ref|ZP_05679231.1| histidyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293571371|ref|ZP_06682402.1| histidyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257824201|gb|EEV51133.1| histidyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257837490|gb|EEV62564.1| histidyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|291608587|gb|EFF37878.1| histidyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 430

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 99/478 (20%), Positives = 193/478 (40%), Gaps = 58/478 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + ++ R ++ +Y ++ + TP+ E+ + + + + D  D 
Sbjct: 1   MSFQRPKGTNDILPGESEKWQFVEETARLLFRDYQYNEMRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   E+         P +T+ +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGERHVTLRPEGTAPIVRSFVEHKLFGPEYAKPFKTFYMGPMFRYERPQK 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR RQF Q  V+  GS     D E  +M  D  + +GI +    I      + R+     
Sbjct: 121 GRLRQFHQIGVEAFGSENPATDVESMVMALDFFKQLGITQIRLVINSLGDKDTRQAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L    L  + +L+E        D   +     +++L  + + D                 
Sbjct: 181 LIDYLLPFEAELSE--------DSKRRLHENPLRVLDSKDKRDQKF---------VADAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +LS   +K    +  ++       +  + +                       VRG
Sbjct: 224 SILDYLSEPAQKHFDTVVSMLDALAVPYEIDSNM-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT  ++E +   P M          ++  GGRYD LV    G + P  GF++GI RL
Sbjct: 261 LDYYTHTIFEIMSDAPKM------GAQATICAGGRYDNLVEELGGPSTPGFGFAMGIERL 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +++ E       E+       +    ++  +     Q +R  G  A+     ++   
Sbjct: 315 LLTMEAEEVVIPAFNELDA---YVVALGDETNIEALKVVQAIRNFGFSADRDF-MNRKAK 370

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            Q K AD+ N  L ++ G  E +   + +K +A  KE S  ++      +    ++T+
Sbjct: 371 AQFKTADKANAKLVLVIGEDELASQTINVKAMASRKEKSFPLEEIYEHFDEVYDEMTL 428


>gi|158289577|ref|XP_311269.4| AGAP000735-PA [Anopheles gambiae str. PEST]
 gi|157018584|gb|EAA06848.4| AGAP000735-PA [Anopheles gambiae str. PEST]
          Length = 506

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 125/479 (26%), Positives = 218/479 (45%), Gaps = 39/479 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
              L  + P+G  D   + + +R R+LD +  ++  +G + I+TP+ E  + L     ++
Sbjct: 50  NRNLSLKTPKGTRDYGPEAMALRQRVLDQVVRVFRRHGAETIDTPVFELKEVLTGKYGED 109

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
              +K ++ L+D  G+ ++LRYDLT P ARYV       VF  + Y I  V+R +     
Sbjct: 110 ---SKLIYDLKDQGGEILALRYDLTVPFARYV---GMGNVFNIKRYHIAKVYRRDNPQIT 163

Query: 122 PGRFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
            GR+R+F QCD D  G+        E   ++ + L  VG+   D+ + +N+RK+LDGI E
Sbjct: 164 RGRYREFYQCDFDIAGTYDPMLPDAECVKVVCEILAEVGV--GDFVVKLNHRKLLDGIFE 221

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  D    +      ++DKLDK               +   +  +   L+ E +  +
Sbjct: 222 ACGVPAD----KFRTACSSVDKLDKTPW-----------EEVRREMVEEKGLSEEAVGRI 266

Query: 241 VSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             F+++     + E     E ++      +G  ++ ++ +        ++R+    ++ R
Sbjct: 267 GQFVTLHGGTELIERLAADETLRSIKVAMEGLEDMRLLLQYCEIF-QVADRVSFDLSLAR 325

Query: 298 GLEYYTGCVYEAIL----GFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGF 351
           GL+YYTG +YEA+L    G    +   + +  GSV GGGRYD L  +   K + VP  G 
Sbjct: 326 GLDYYTGVIYEAVLLGGGGAGGGSSADEEITVGSVAGGGRYDNLVGMFNPKRKQVPCVGV 385

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG+ RL   L++         E     +           K       L +AG++AE   
Sbjct: 386 SIGVERLFSILEARAGGKTRTNE---TEVYVASAHKGLHLKRLEILNKLWSAGLKAEHSY 442

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             +     QL++ +    P A+I G GE SRG+++++++A  KE    +         R
Sbjct: 443 KLNPKLLAQLQHCEEYQIPYAVILGDGELSRGVVKLREIATRKEEEVALDTFIEELRRR 501


>gi|116628637|ref|YP_821256.1| histidyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122266769|sp|Q03IB2|SYH_STRTD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116101914|gb|ABJ67060.1| histidyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312279288|gb|ADQ63945.1| Histidyl-tRNA synthetase [Streptococcus thermophilus ND03]
          Length = 426

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 96/473 (20%), Positives = 177/473 (37%), Gaps = 52/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      + +  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDSAKWQYVENVARETFKKYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS     D E   M       +GIK    H+             + 
Sbjct: 121 GRLREFHQLGVECFGSKNPATDVETIAMAYQLFNTLGIKDVTLHLNSLGNTDSRLAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPMRESL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +    E+  ++                          +    I + +VRGL+YY
Sbjct: 228 YLDEESQTHFDEVRAMLDSL-----------------------NIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I                ++  GGRYD LV  F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITTIDKSE--------LTICAGGRYDSLVEYFGGPETAGFGFGLGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                     + +  V I  +   ++   K     Q +R  G +AE      +    Q K
Sbjct: 317 DKQGIKLPVEESLD-VYIAVLGSGAN--GKALELVQSIRYQGFKAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            AD       I  G  E   G++++K+ A  +E++   +   +     + Q+ 
Sbjct: 373 SADTFKAKTVITLGESEVESGVVKVKNNATREEVTVSFEELTTNFATVLKQLE 425


>gi|242373930|ref|ZP_04819504.1| histidyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348484|gb|EES40086.1| histidyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 430

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 94/465 (20%), Positives = 184/465 (39%), Gaps = 50/465 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++      I + +  + E Y +  I TP+ E ++   + + D  D   
Sbjct: 12  IKIPRGTQDILPEDSVKWRYIENKLDELMEIYNYKEIRTPIFESTELFARGVGDSTDVVQ 71

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ QD   + ++LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 72  KEMYTFQDKGDRSLTLRPEGTAAVVRSYIEHKMQGQPNQPVKLYYNGPMFRYERKQKGRY 131

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K     I  I + +      E +  
Sbjct: 132 RQFNQFGVEAIGAENPSIDAEVLAMVMHIYQSFGLKHLKLVINSIGDSESRKEYNEALVE 191

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +      +I     D   +     +++L  +   D             +    +  +L
Sbjct: 192 HFE-----PVIDTFCSDCQSRLHTNPMRILDCKVDRDKEAI---------KNAPRITDYL 237

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + D +    ++ + +                          +        +VRGL+YYT 
Sbjct: 238 NDDSKAYFEQVKQHLDDL-----------------------NIPYVEDPNLVRGLDYYTH 274

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++   +
Sbjct: 275 TAFEVMMDNPNYD-----GAITTLCGGGRYNGLLQLLDGPSETGIGFALSIERLLL---A 326

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           LE     +       +  +    ++          LR  G++A+     ++    Q+K A
Sbjct: 327 LEEEDIELDIESKFDLFIVTMGEEADRYAVKLLNELRKNGVKADKDY-LNRKIKGQMKQA 385

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           DR N    I+ G  E     + IK +A G+    ++     + + 
Sbjct: 386 DRLNAKYTIVIGDQELENNSIDIKHMASGESEKVQLDQLVDYFKE 430


>gi|187935133|ref|YP_001885234.1| histidyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187723286|gb|ACD24507.1| histidine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 417

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 97/464 (20%), Positives = 181/464 (39%), Gaps = 54/464 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D   ++    + + ++ R++ + YG   I TP+ E+++   + + D  D 
Sbjct: 3   MEMQAPKGTKDMLPQDAYKWHYVENTFRDVVKTYGIREIRTPMFEHTELFLRGVGDTTDI 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + ++L+ + TAP  R   EN       P + + I P FR E    GR
Sbjct: 63  VQKEMYTFNDKGNRSVTLKPEGTAPAVRAFIENRLFNEAQPTKLFYITPAFRYENVQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF QC ++  GS   T D E   +  DTL  +G+K    HI             +   
Sbjct: 123 LRQFHQCGIEMFGSKEPTMDVEAIKVAMDTLSKLGLKSLSLHINNLGCPTCRAKYNEALK 182

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              ++  E L          +F    +++L  + R           N  ++    ++ ++
Sbjct: 183 KFLEENYENLCET----CKSRFEKNPMRILDCKERK---------CNEITKNAPQILDYV 229

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + E   +++ E +                               +   IVRGL+YYT 
Sbjct: 230 CEECETHFNKVKEYLD-----------------------ILGISYVVDQGIVRGLDYYTK 266

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++E +                +V GGGRYD L+    G  +PA GF+IG  R+I+ L++
Sbjct: 267 TIFEIVNDD------------FTVCGGGRYDKLIEELGGPEMPAVGFAIGEERIIMTLEN 314

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  I     V +          +        LR  G++ E+     ++   ++KYA
Sbjct: 315 EGI---EIPNENMVDLYIGARGEAEKNYAFKIAHDLRKLGVKCEINH-MGRSIKAEMKYA 370

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++       I G  E     + +K +  G+  +  + N E  ++
Sbjct: 371 NKIGSKFTTILGEDELQNNQINLKRMEDGEIFTLSLDNIEEIQK 414


>gi|197119467|ref|YP_002139894.1| histidyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197088827|gb|ACH40098.1| histidyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 416

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 92/457 (20%), Positives = 171/457 (37%), Gaps = 54/457 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +     +GF D    E+     I  + R ++E YG   I  P+LE ++   + + D  D 
Sbjct: 1   MAITGIKGFNDILPGEVEKWQYIEATARRVFELYGLSEIRIPILEKTELFCRSIGDATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K ++S  D     +++R + TA + R   E+    +    R Y +GP+FR E+   GR
Sbjct: 61  VEKEMYSFVDKGENKVTMRPEGTASVMRAYVEHKMHALDPVARLYYMGPMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q   +  G +A + DA++  M+      +G+      I          +      
Sbjct: 121 YRQFHQIGAEITGVAAPSVDAQVLTMLTHFFNELGLTEPSLQINSLGCPCCRPLYRDAL- 179

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
               K     I     D   ++    ++ L  +           G    ++    M+ +L
Sbjct: 180 ---KKFLLDRIDSLCEDCKRRYESNPLRALDCKS---------AGCQEATQGAPSMLDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +      +  + ++                              I+  +VRGL+YYT 
Sbjct: 228 CGECSAHFDQTRKYLE-----------------------LADTPYAINKRMVRGLDYYTR 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +                +V  GGRYDGL++   G  +P  GF++G+ R+ + L  
Sbjct: 265 TTFEMVTTL--------LGAQSAVAAGGRYDGLIAEIGGPQIPGIGFAMGVERVALLLAE 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E S           +       ++ ++       L+  G   E+     K+  +Q++ A
Sbjct: 317 KEFSRRP-------DLFIAAMGEEAHAEAFRLMSALQRGGAAVEIDY-EGKSLKSQMRRA 368

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           D+ N    +I G  E SRG   +K++  G +    + 
Sbjct: 369 DKFNSRFTLIIGGDELSRGTAPLKNMDGGTQSEVPLD 405


>gi|85712736|ref|ZP_01043781.1| Histidyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693468|gb|EAQ31421.1| Histidyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 415

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 103/489 (21%), Positives = 177/489 (36%), Gaps = 86/489 (17%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++     ++   IR +  +YG+  I  P+LE +    + + +  D   K +++ 
Sbjct: 1   MNDLLPEQTAAWQQVEAIIRQVAASYGYQEIRMPVLESTALFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D +G+ ++LR + TA   R   ++        R + +GP+FR E+   GR+RQF Q  +
Sbjct: 61  DDRNGESVTLRPEGTASCVRAGNQHGLLYNQIQRLWYMGPMFRYERPQKGRYRQFHQFGI 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGI---------KRNDYHIGINNRKILDGILEKIGL 184
           +  G     ADAE+ ++ A   +A+G+                    R  L   LE+   
Sbjct: 121 ETFGLEGADADAEVILLSARLWKALGMADQVELQLNSLGSNEARARYRDALRDYLEQYKS 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D+            D   +     +++L  +                 EQ   +  + 
Sbjct: 181 ELDE------------DSQRRLDTNPLRILDSKDGNTQQ---------LLEQAPKLSDYW 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + ++   EL   +                                +  +VRGL+YY  
Sbjct: 220 DEESKQHFDELKARLDAA-----------------------GIPYVFNERLVRGLDYYNR 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ RL++ L+ 
Sbjct: 257 TVFEWVTTA--------LGAQGTVCAGGRYDGLVEQLGGKATPAVGFAMGMERLVLLLQE 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLK 422
            E           V    M     +    Q   + LR     +R  +  G       Q+K
Sbjct: 309 QEKLAPRRA----VDAYLMPLGEAAELNAQAVAEKLRNELPDLRIVVHSGGGA-MKKQIK 363

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            AD+    +A+I G  E     L +K L                      Q T+   ELV
Sbjct: 364 KADKSGAEVALILGENELENNQLTVKPLRT-----------------TDDQQTLGWGELV 406

Query: 483 STVKKILQE 491
             +K + QE
Sbjct: 407 VALKPLTQE 415


>gi|157126305|ref|XP_001654585.1| histidyl-tRNA synthetase [Aedes aegypti]
 gi|108882557|gb|EAT46782.1| histidyl-tRNA synthetase [Aedes aegypti]
          Length = 514

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 123/501 (24%), Positives = 224/501 (44%), Gaps = 58/501 (11%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
              +  + P+G  D   + + +R  IL+ ++ I++ +G + I+TP+ E  + L     ++
Sbjct: 53  NKNITLKTPKGTRDYGPEAMALRLDILERVKTIFKKHGAETIDTPVFELKEVLTGKYGED 112

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--G 121
              +K ++ L+D  G+ ++LRYDLT P AR+V       VF  R Y I  V+R +     
Sbjct: 113 ---SKLIYDLKDQGGEILALRYDLTVPFARFV---GMGNVFNIRRYHIAKVYRRDNPAMT 166

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G+         C+ +   +    +   ++ + +N+RK+LDG+ E 
Sbjct: 167 RGRYREFYQCDFDIAGTYDPMLPDAECVKVVTEILT-ELDIGEFVVKLNHRKLLDGMFEA 225

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  D    +   +  ++DKLDK   + V+  + +              L  E  D + 
Sbjct: 226 CGVPAD----KFRTICSSVDKLDKTPWEEVRKEMMDE-----------KGLDGEIADRIG 270

Query: 242 SFLSIDLEKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ ++    +       E +K   +  +G  ++ ++ +     G   ++I    ++ RG
Sbjct: 271 EYVRMNGGAELVDKLAEDEKLKNIKSAIEGIEDMRLLLQYCEIFG-LKDKIVFDLSLARG 329

Query: 299 LEYYTGCVYEAILGFPVMN--------EKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPA 348
           L+YYTG +YEA+L    +         +K++ V  GSV GGGRYD L  +   K + VP 
Sbjct: 330 LDYYTGVIYEAVLKAEPLPVENGKKGKDKEEEVSVGSVAGGGRYDNLVGMFNPKRKQVPC 389

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G SIG+ R+   L++             +             K       L  AGI+AE
Sbjct: 390 VGVSIGVERIFSILEAKNQQ--KKIRTTEIEAYVASAHKGLHLKRMEVLNKLWDAGIKAE 447

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                +     QL+Y +    P A++ G GE SRG++++++++  KE             
Sbjct: 448 HPYKQNPKLLAQLQYCEENQIPYAVVLGDGELSRGVVKLREISSRKE------------- 494

Query: 469 ARVAQITIPISELVSTVKKIL 489
                  +P+  L   ++K L
Sbjct: 495 -----DEVPVENLAEEIRKRL 510


>gi|55821938|ref|YP_140380.1| histidyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55823857|ref|YP_142298.1| histidyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|81676488|sp|Q5LXM9|SYH_STRT1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|81676641|sp|Q5M281|SYH_STRT2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|55737923|gb|AAV61565.1| histidine-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55739842|gb|AAV63483.1| histidine-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 426

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 96/473 (20%), Positives = 177/473 (37%), Gaps = 52/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      + +  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGDSAKWQYVENVARETFKKYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS     D E   M       +GIK    H+             + 
Sbjct: 121 GRLREFHQLGVECFGSKNPATDVETIAMAYQLFNTLGIKDVTLHLNSLGNTDSRLAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + E L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPMRESL----SKDSQRRLEENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +    E+  ++                          +    I + +VRGL+YY
Sbjct: 228 YLDEESQTHFDEVRAMLDSL-----------------------NIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I                ++  GGRYD LV  F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITNIDKSE--------LTICAGGRYDSLVEYFGGPETAGFGFGLGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                     + +  V I  +   ++   K     Q +R  G +AE      +    Q K
Sbjct: 317 DKQGIKLPVEESLD-VYIAVLGSGAN--GKALELVQSIRYQGFKAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            AD       I  G  E   G++++K+ A  +E++   +   +     + Q+ 
Sbjct: 373 SADTFKAKTVITLGESEVESGVVKVKNNATREEVTVSFEELTTNFATVLKQLE 425


>gi|149908868|ref|ZP_01897528.1| histidyl-tRNA synthetase [Moritella sp. PE36]
 gi|149808142|gb|EDM68083.1| histidyl-tRNA synthetase [Moritella sp. PE36]
          Length = 426

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 107/493 (21%), Positives = 202/493 (40%), Gaps = 69/493 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC  ++  +  ++   +R+    YG+  I  P++E ++   + +
Sbjct: 1   MAKP----IQAIRGMNDCLPEQTPVWQKVESILRDTVAAYGYSEIRMPIVESTNLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   +N        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGDSLTLRPEGTASTVRAGIQNGLLYNQERRMWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+ ++ A     +GI+           + +   L
Sbjct: 117 PQKGRYRQFHQFGVEIFGLKGADTDAEVILLTARLWRLLGIE-----------QHVTLQL 165

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +G   +   ++  ++       D+   +  + +                         
Sbjct: 166 NSLGSSAERSAHKEALISFLEGFKDQLDEESQRRMYTNPL-------------------R 206

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++   + +++  +++   L      GE+       + +++  +G      +I+  +VRGL
Sbjct: 207 VLDSKNPNVQALLNDAPSLADYY--GEETKAHFDGLCKMLDSAG---VNYQINHRLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +         +     G+V GGGRYDGLV +  G+  PA GF++GI RL+
Sbjct: 262 DYYNYTVFEWVT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPAVGFALGIERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFG 418
           +    LE+        G V +        +     +  + LR      + M      NF 
Sbjct: 314 L---LLETLELTADIAGAVDVYIAALGEGADMHGMLLAEQLRDQMPNVKFMMHNGGGNFK 370

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            QLK AD+    +A+I G+ E     + +KDL    +                 Q TI +
Sbjct: 371 KQLKRADQNGAKVALILGSDEIENQQVTVKDLTGKTQ-----------------QQTIAV 413

Query: 479 SELVSTVKKILQE 491
           +ELV+ +  +L +
Sbjct: 414 TELVNKLTTLLSK 426


>gi|121708482|ref|XP_001272145.1| histidyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           clavatus NRRL 1]
 gi|119400293|gb|EAW10719.1| histidyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           clavatus NRRL 1]
          Length = 609

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 118/535 (22%), Positives = 203/535 (37%), Gaps = 73/535 (13%)

Query: 1   MGKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M K  K     + P+G  D    +  +R+RI  +I ++++ +G   ++TP+ E  + L  
Sbjct: 74  MPKDNKNAFNLKTPKGTKDWSGSDALLRDRIFSTIADVFKRHGGTALDTPVFELREILAG 133

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                  
Sbjct: 134 KYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRSMKRYHIAKVYRRDQP 190

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
               GR R+F QCD D  G+          + +   +      +  Y I +N+RKILDG+
Sbjct: 191 AVSKGRMREFYQCDFDIAGTFDPMVPDAEILRIVTEVFEELGWKGRYTIKVNHRKILDGL 250

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E  G+  +    +   +  A+DKLDK     V+  + E              L     D
Sbjct: 251 FEVCGVPAE----KIRPISSAVDKLDKMPWADVRKEMVEE-----------KGLEGAVAD 295

Query: 239 IMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            +  +++    + + E     E +    + + G  E+ ++ + +   G   +RI    ++
Sbjct: 296 KIEKYVAGKGGRDLLESLAKDEALMANASAKAGLEEMGLLMDYLEAFGVL-DRISFDMSL 354

Query: 296 VRGLEYYTGCVYEAILG------------------------------FPVMNEKQKPVVF 325
            RGL+YYTG +YE +                                          +  
Sbjct: 355 ARGLDYYTGVIYEVVTEGSAPAVSSSAPEAQKLQKSGKKSKSKSGNLEDDDRSNDPTLGV 414

Query: 326 GSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVA----LKSLESSTNNIKEMGPVLI 380
           GSV  GGRYD LV  F     +P  G S G+ R+       L+  +S+         V +
Sbjct: 415 GSVAAGGRYDNLVGMFLPKAQIPCVGVSFGVDRIFSITKARLEREKSAEALRSSEVDVFV 474

Query: 381 TTMDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
                      L +     Q L  + I+AE           Q K A++   P A+I G  
Sbjct: 475 MAFGGKGFTGMLKERMDVCQKLWNSNIKAEFSYKIKPKLPQQFKAAEQGGVPFAVILGED 534

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           E + G ++IK++                       + + ++ +   VK  L + +
Sbjct: 535 ELAAGKVRIKEM------------GLEEGHPEKEGVLVDLATITDEVKTRLAKKQ 577


>gi|262276691|ref|ZP_06054489.1| histidyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262225142|gb|EEY75596.1| histidyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 401

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 173/416 (41%), Positives = 259/416 (62%), Gaps = 15/416 (3%)

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           S +D   +W+SLRYDLTAPLAR+ A+NFD +  P + Y++G V+RNEK GPGRFR+F+Q 
Sbjct: 1   SFED-GKKWLSLRYDLTAPLARFSAKNFDNLPRPFKRYQVGTVWRNEKPGPGRFREFLQF 59

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
           D D VG++   AD+E+C+++++ L   G+   +++I I+NRK+  G+LE + +   D+  
Sbjct: 60  DADYVGTNNLLADSELCVLISEILLNCGLTEKEFNIKISNRKLSKGLLEDLDIVDQDQ-- 117

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
            + I LRAIDKLD+ GL G+K LLG+GR D SGDFT GANL + +I+ +++FL+    + 
Sbjct: 118 -QGISLRAIDKLDRVGLDGIKDLLGKGRKDKSGDFTDGANLEASKIEKIINFLNCKGIED 176

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           +    + +       +G  EL  + E  +   +   ++  +  +VRGLEYYTG ++EA L
Sbjct: 177 L----KKISQNKIYNEGLTELENMCEYFKLFDFKYFKVDST--VVRGLEYYTGPIFEAEL 230

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F V N+K   + FGS+GGGGRYD LV RFK Q+ PATG SIG+ RL+ AL   +     
Sbjct: 231 TFKVKNDKGLDIEFGSIGGGGRYDDLVKRFKNQDCPATGISIGLDRLLYALSQKDIFNFK 290

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
            K    + +     D +    Y     +LR+  I AE++ GSS  F  QLKYAD+RNC  
Sbjct: 291 QKSPILICVL----DENYNDYYFKILNLLRSNNINAEIYAGSSG-FKAQLKYADKRNCKY 345

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           AII G  E ++ ++ +K+L  G ++S EI + E W +A+ AQ T  ++ L+  +KK
Sbjct: 346 AIICGEDEVAKELVTLKNLEIGSKISEEIDSREDWTQAKDAQKTFSLTSLIEEIKK 401


>gi|261209229|ref|ZP_05923621.1| histidyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566145|ref|ZP_06446580.1| histidyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|294614200|ref|ZP_06694120.1| histidyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|260076775|gb|EEW64510.1| histidyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162090|gb|EFD09955.1| histidyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291592976|gb|EFF24565.1| histidyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 430

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 99/478 (20%), Positives = 193/478 (40%), Gaps = 58/478 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + ++ R ++ +Y ++ + TP+ E+ + + + + D  D 
Sbjct: 1   MSFQRPKGTNDILPGESEKWQFVEETARLLFRDYQYNEMRTPIFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+ R   E+         P +T+ +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGERHVTLRPEGTAPIVRSFVEHKLFGPEYAKPFKTFYMGPMFRYERPQK 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR RQF Q  V+  GS     D E  +M  D  + +GI +    I        R+     
Sbjct: 121 GRLRQFHQIGVEAFGSENPATDVESMVMALDFFKQLGITQIRLVINSLGDKETRQAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L    L  + +L+E        D   +     +++L  + + D              +  
Sbjct: 181 LIDYLLPFESELSE--------DSKRRLHENPLRVLDSKDKRDQKF---------VAEAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +LS   +K    +  ++       +  + +                       VRG
Sbjct: 224 SILDYLSEPAQKHFDTVVSMLNALAVPYEIDSNM-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT  ++E +   P M          ++  GGRYD LV    G + P  GF++GI RL
Sbjct: 261 LDYYTHTIFEIMSDAPKM------GAQATICAGGRYDNLVEELGGPSTPGFGFAMGIERL 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +++ E       E+       +    ++  +     Q +R  G  A+     ++   
Sbjct: 315 LLTMEAEEVVIPAFNELDA---YVVALGDETNIEALKVVQAIRNFGFSADRDF-MNRKAK 370

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            Q K AD+ N  L ++ G  E +   + +K +A  KE S  ++      +    ++T+
Sbjct: 371 AQFKTADKANAKLVLVIGEDELASQTINVKAMASRKEKSFPLEEIYEHFDEVYDEMTL 428


>gi|163791445|ref|ZP_02185854.1| histidyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873309|gb|EDP67404.1| histidyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 441

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 101/471 (21%), Positives = 182/471 (38%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD   ++ R    + + +  +  +Y F  I TP+ E  D   + + +  D 
Sbjct: 1   MAIQKPKGTADLLPEDSRKWQYVEEILNMVLADYQFGEIRTPIFESYDLFSRGVGETSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + +SLR + TAP+ R   EN         P + Y  GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGERHMSLRPEGTAPVVRAFVENKLFGPEHNKPYKVYYKGPMFRYERPQG 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEK 181
           GR RQF Q  V+  GS+    D E   +     E +G+++    I    + +      E 
Sbjct: 121 GRMRQFHQLGVEVFGSTNPATDVESMALAMALFEELGLEKLTLVINSLGDAESRLAYREA 180

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +  + +    E      + D   +     +++L  + + D             +    ++
Sbjct: 181 LIAYLEPHFEEL-----SSDSQTRLHKNPLRVLDSKDKNDKE---------IVKNAPSIL 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +LS + +     + E++                          +    + S +VRGL+Y
Sbjct: 227 DYLSEESKTHFEAVKEMLTAL-----------------------NIPFVVDSNMVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT  ++E +   P            ++  GGRYDGLV    G   P  GF++G+ RL++ 
Sbjct: 264 YTHTIFEVMSDAPGF------GAITTICAGGRYDGLVEEVGGPATPGFGFALGLERLMMT 317

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L++ E     I +   V +  +     +  +     Q +R AG+ AE     ++    Q 
Sbjct: 318 LEAEEI---EIPDTHEVDVYVIGLGEATNLESLKIVQAIRGAGLSAERDY-MNRKIKGQF 373

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           K A +    + I  G  E  R     K +  GKE S  +       E    
Sbjct: 374 KTASKLKAKVVITLGDAELERKEANFKVMKTGKESSVSLAEIYKDFEKLFN 424


>gi|316974790|gb|EFV58263.1| histidyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 513

 Score =  247 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 122/470 (25%), Positives = 217/470 (46%), Gaps = 44/470 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPD 62
           + K   + P+G  D    ++ IR  ++  +   ++ +G   I+TP+ E  ++L GK+  +
Sbjct: 64  QKKFVLKAPKGTRDYGPTQMAIREEVIQKVVQCFKRHGAQTIDTPVFELKETLTGKYGEE 123

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
               NK ++ LQD  G+ ++LRYDLT P ARY+A N  T +             N     
Sbjct: 124 G---NKLIYDLQDQGGELLALRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPAMTR 179

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+R+F+QCD D  GS         C+ +   +    +  N + + IN+RK+LDGIL   
Sbjct: 180 GRYREFMQCDFDIAGSYDPMIPEAECLKIVAEIMN-AVDLNAFELKINHRKLLDGILTVC 238

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+  D    +   +  +IDKLDK   + ++L           +      L+ +  D +  
Sbjct: 239 GVPED----QFSTICSSIDKLDKQPWEEIRL-----------EMINEKGLSPDVSDKLEK 283

Query: 243 FLSI-----------DLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
            + +           DL  ++ E    + ++K +   +   NE+ ++           ++
Sbjct: 284 LICLRQNTCSAASGKDLNATLLEELSSHSMLKSSDVAQAALNEIKLLLSYCEAFEI-EDK 342

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ--NV 346
           + +  ++ RGL+YYTGC+YEA+L     +        GSV GGGRYD LV+ F  +  +V
Sbjct: 343 VVLDPSLARGLDYYTGCIYEAVLLGEDES------SVGSVAGGGRYDKLVNMFMTKGKDV 396

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIGI R+   ++  +  +    +     +       + +         L  + I+
Sbjct: 397 PCVGVSIGIERIFAIMEHKQKLSGEKVKSIETDVFVASAQKNLIKYRMSICSELWRSSIK 456

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           AEM   ++     QL+Y +    PLA+I G  E  + +++I+D+A  +E+
Sbjct: 457 AEMSYKANPKLLQQLQYCEENGIPLAVIIGEREIEKNIVKIRDVASRQEV 506


>gi|195039924|ref|XP_001990974.1| GH12430 [Drosophila grimshawi]
 gi|193900732|gb|EDV99598.1| GH12430 [Drosophila grimshawi]
          Length = 504

 Score =  247 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 125/507 (24%), Positives = 220/507 (43%), Gaps = 59/507 (11%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   +  +G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++
Sbjct: 38  NQKFTLKTRKGTRDYAPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED 97

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     G
Sbjct: 98  ---SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTRG 153

Query: 124 RFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           R+R+F QCD D         ADAE   ++A+ L  +     DY I +N+R++LDG+ E  
Sbjct: 154 RYREFYQCDFDIAGTYDPMLADAECVKIVAEILNTLD--IGDYVIKLNHRQLLDGMFEAC 211

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+      N    +  A+DKLDK   + V+  + E              L     D +  
Sbjct: 212 GVP----ANCFRAICSAVDKLDKSPWEDVRKEMVEE-----------KGLDGATADKIGE 256

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +     + E       +K      KG   + ++ +     G    RI    ++ RGL
Sbjct: 257 YVRLSGGADLVEQLLADPKLKAVPNAVKGLEGMQLLLKYCALFG-LEQRISFDLSLARGL 315

Query: 300 EYYTGCVYEAILGFPVMNEK-------------QKPVVFGSVGGGGRYDGL--VSRFKGQ 344
           +YYTG +YE +L                     ++    GSV GGGRYD L  +   +G+
Sbjct: 316 DYYTGVIYEGVLKVDPSPAGSPAKSSQNGEQAMEQGGTVGSVAGGGRYDNLVGMFDPRGK 375

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            VP  G SIG+ R+   L++  +++        V +           +       L  AG
Sbjct: 376 AVPCVGVSIGVERIFSVLEAKFAASKVKLRTSDVEVYVASAHKGLHEQRLRVLNQLWDAG 435

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I+AE     +     QL++ +    PLAI+ G  E ++G+++++++   +E S       
Sbjct: 436 IKAEHSYKLNPKLLAQLQHCEEHQIPLAIVLGDSELAQGIVKLREVTTRQESS------- 488

Query: 465 SWREARVAQITIPISELVSTVKKILQE 491
                      +P+ EL   +++ LQ+
Sbjct: 489 -----------VPLVELPDEIRRRLQK 504


>gi|302342312|ref|YP_003806841.1| histidyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638925|gb|ADK84247.1| histidyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 417

 Score =  247 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 104/486 (21%), Positives = 189/486 (38%), Gaps = 72/486 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +  RG  D    E+     I  + R +++ +GFD I+TP+LE ++   + + +  D 
Sbjct: 1   MSVQAVRGMKDVMAPEVGKWQFIEATARRVFDCFGFDEIKTPVLEKTELFVRSIGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G  +SLR + TA + R   EN       P R + IGP+FR E+   GR
Sbjct: 61  VEKEMYTFADRGGDMLSLRPEATAGVLRAYVENKLHAQPGPHRLFTIGPMFRRERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIG 183
            RQF Q + + +G      DAE+ +M+   L+ +G++  +  +      +      + + 
Sbjct: 121 LRQFHQLNCEVLGDEGPLVDAELLVMLDHLLKELGLRNVEIVLNSLGCPECRPAFRQALS 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                +  E        D   +     +++L  +          +G    ++    +   
Sbjct: 181 AFLRGRAGEL-----CPDCQRRLERNPLRVLDCKA---------EGCRQAAQGAPSIAEH 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L       + ++  ++                            + KI   +VRGL+YY 
Sbjct: 227 LCPACADHLAQVRGMLAAA-----------------------GVQYKIDPKLVRGLDYYV 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +EA+                +V GGGRYDGL+    G      GF  G+ RL + L 
Sbjct: 264 RTTFEAL--------AGDLGAQNAVAGGGRYDGLIQALGGPAEGGVGFGCGLERLALLLA 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                  + +      +      +   +     TQ LR AG+R EM +   K+   Q++ 
Sbjct: 316 D------DPRWRREPALFVAALGAGPRAWAFELTQRLRRAGLRVEM-MSQDKSLKAQMRR 368

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           AD+     A+I G  E + G+ Q+KD+A                 A   Q  +P+     
Sbjct: 369 ADKLGARRALIVGEQELADGVAQLKDMA-----------------AAGRQEPLPLDGAFE 411

Query: 484 TVKKIL 489
            ++K++
Sbjct: 412 ALRKLI 417


>gi|228478117|ref|ZP_04062728.1| histidyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250297|gb|EEK09550.1| histidyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 426

 Score =  247 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 101/473 (21%), Positives = 178/473 (37%), Gaps = 52/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      + +  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPADSAKWQYVENVARETFKKYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS     D E   M       +GIK  D  + +N+    +  L   
Sbjct: 121 GRLREFHQLGVECFGSKNPATDVETIAMAYQLFNTLGIK--DVTLHLNSLGNTESRL-AY 177

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D L      L   D   +     +++L  + + D          +  E    ++ 
Sbjct: 178 RQALIDYLTPMRESLS-KDSQRRLDENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +    E+  ++                          +    I + +VRGL+YY
Sbjct: 228 YLDEESQAHFDEVRTMLDSL-----------------------NIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I                ++  GGRYD LV  F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFITTIDKSE--------LTICAGGRYDSLVEYFGGPETAGFGFGLGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    ++E   V I  +   ++   K     Q +R  G +AE      +    Q K
Sbjct: 317 DKQGI-ELPVEENLDVYIAVLGSGAN--GKALELVQAIRYQGFKAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            AD       I  G  E   G + +K+ A  +E++   +       A + Q+ 
Sbjct: 373 SADTFKAKTVITLGESEVESGQVNVKNNATREEVTVSFEELTKNFAAVLEQLE 425


>gi|307565520|ref|ZP_07628001.1| histidine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345774|gb|EFN91130.1| histidine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 454

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 135/484 (27%), Positives = 215/484 (44%), Gaps = 55/484 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+  RN I D+I+++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGPEEMAKRNYIFDTIKHVYALYGFQQIETPAMETFHTLMGKYGEEGDKL 63

Query: 65  ---RPNKGVFSLQDDDGQWI--------------SLRYDLTAPLARYVAENFDTIVFPCR 107
                N G +     D + +               LRYDLT P ARYV  + + +  P +
Sbjct: 64  LFKILNSGDYLKTISDEEILQRNILKLQTKLCEKGLRYDLTVPFARYVVMHREELHLPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GR+R+F QCD D +GS +   + E+  ++       GI      I
Sbjct: 124 RYQIQPVWRADRPQKGRYREFYQCDADIIGSDSLLNEVELLQIIDTVFTKFGI---RVQI 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL GI E IG     +  + + +  AIDKL+K GL  V   L            
Sbjct: 181 KINNRKILTGIAEVIG-----EREKIVAITVAIDKLEKIGLSKVNEEL------------ 223

Query: 228 KGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
           +   ++ E ID +   +  D   E+ +  +  ++K +  G +G NEL  I   ++     
Sbjct: 224 RSVGISDEAIDKLQPIIKFDGSNEEKLDVIAGVLKDSEIGLEGVNELRFILSKLKLLN-L 282

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
            N  +I  T+ RGL YYTG ++E          K      GS+ GGGRYD L   F  Q 
Sbjct: 283 QNETQIDLTLARGLNYYTGAIFEV---------KALDTQIGSITGGGRYDNLTGIFGMQG 333

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G  R+   L +L+             +  ++      +        +R AGI
Sbjct: 334 ISGVGISFGADRIYDVLTTLDLYPKESVSGT--QVLFINFGDKETAYCLPIISKVRKAGI 391

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           RAE++  S K    Q+ YA+ +      + G  E +   + +K++  G++     +    
Sbjct: 392 RAEIYPDSVK-MKKQMSYANAKGIKYVALAGETEMNVNKITLKNMISGEQTLVSSEELIK 450

Query: 466 WREA 469
           +   
Sbjct: 451 YILG 454


>gi|188588876|ref|YP_001920364.1| histidyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188499157|gb|ACD52293.1| histidyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 417

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 98/464 (21%), Positives = 181/464 (39%), Gaps = 54/464 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D   ++    + + ++ R++ + YG   I TP+ E+++   + + D  D 
Sbjct: 3   MEMQAPKGTKDMLPQDAYKWHYVENTFRDVVKAYGIREIRTPMFEHTELFLRGVGDTTDI 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + ++L+ + TAP  R   EN       P + + I P FR E    GR
Sbjct: 63  VQKEMYTFNDKGNRSVTLKPEGTAPAVRAFIENRLFNEAQPTKLFYITPTFRYENVQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF QC ++  GS   T D E   +  DTL  +G+K    HI             +   
Sbjct: 123 LRQFHQCGIEIFGSKEPTMDVEAIKVAMDTLSKLGLKSLSLHINNLGCPTCRAKYNEALK 182

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              ++  E L          +F    +++L  + R  +           ++    ++ ++
Sbjct: 183 KFLEENYENLCDT----CKSRFEKNPMRILDCKERKCHE---------ITKNAPQILDYV 229

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + E   +++ E +                               +   IVRGL+YYT 
Sbjct: 230 CEECETHFNKVKEYLDVLE-----------------------IPYIVDQGIVRGLDYYTK 266

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++E I                +V GGGRYD LV    G  +PA GF+IG  R+I+ L++
Sbjct: 267 TIFEIINDD------------FTVCGGGRYDKLVEELGGPEMPAVGFAIGEERIIMTLEN 314

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  I     V +                   LR+ GI+ E+     ++   ++KYA
Sbjct: 315 EGI---EIPNENMVDLYIGARGDAEKKYAFKLAHDLRSLGIKCEINH-MGRSIKAEMKYA 370

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++       I G  E     + +K +  G+  +  + + E  ++
Sbjct: 371 NKIGSKFTTILGEDELENNRINLKRMEDGEIFTLSLDSIEEIQK 414


>gi|226939615|ref|YP_002794688.1| histidyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254782334|sp|C1DD44|SYH_LARHH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226714541|gb|ACO73679.1| Syh [Laribacter hongkongensis HLHK9]
          Length = 423

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 99/489 (20%), Positives = 184/489 (37%), Gaps = 85/489 (17%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    E          +R +  +YG+  I TP++E +    + + +  D  
Sbjct: 4   KIQAIRGMNDILPAESHQWEYFEGVLRGLLADYGYQNIRTPIVESTPLFIRSIGEVTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D  +G  ++LR + TA   R V E+        + +  GP+FR+E+   GR+
Sbjct: 64  EKEMYTFTDSLNGDSLTLRPEGTAGTLRAVVEHNLLYNTTQKLWYTGPMFRHERPQKGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q  ++ +G +    DAE+ +M AD  + +GI            +      +R+ L 
Sbjct: 124 RQFHQIGIEALGFAGPDIDAEIILMTADLWKRLGISDFVQLEINTLGNKEERAAHREALI 183

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             LE      D+            D   +     +++L  +                  Q
Sbjct: 184 KYLEGHVDILDE------------DGKRRLYTNPLRVLDTKNPAMQDMA---------NQ 222

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ +L  +          +++                           R   +  +V
Sbjct: 223 APRLIDYLGAESRAHYDGWKAMIEA-----------------------VGIRYVENPRLV 259

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +               G+V  GGRYDGL  +  G+  P  GF +G+ 
Sbjct: 260 RGLDYYNQSVFEWVTTE--------LGAQGTVCAGGRYDGLTEQIGGKPAPGIGFGMGME 311

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+++    L +  + +       +  +     +        Q LR AG+     LG + +
Sbjct: 312 RVLL----LLADKDLLPARKAADVYIVQQGEGAPVYAMQLAQDLRAAGLSVIQHLGEA-S 366

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           F +Q+K AD+     A++ G  E  +  + +K L  G E                 Q T+
Sbjct: 367 FKSQMKKADQSGARWALVVGENEIRQQQVAVKPLRDGTE-----------------QQTV 409

Query: 477 PISELVSTV 485
             +++VS +
Sbjct: 410 ARTDIVSHL 418


>gi|257877237|ref|ZP_05656890.1| histidyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811403|gb|EEV40223.1| histidyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 432

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 97/477 (20%), Positives = 188/477 (39%), Gaps = 58/477 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + ++ R ++ +Y F+ I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQRPKGTNDILPGESEKWQFVEETARLVFRDYQFNEIRTPIFEHFEVIARSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+AR   EN         P + +  GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGERHVTLRPEGTAPIARSYVENKLFGPEHTKPYKVFYTGPMFRYERPQK 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR RQF Q  V+  GS+    D E   M  D    +G+ +    I        R+     
Sbjct: 121 GRLRQFHQIGVEVFGSANPATDVETMAMAMDFYRQLGLSQLRLVINSLGDKETRQNYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L       + +L+E        D   +     +++L  + + D                 
Sbjct: 181 LIDYLAPHEAELSE--------DSKRRLHENPLRVLDSKDKRDQKF---------VADAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ D +     +  ++       +  + +                       VRG
Sbjct: 224 SILDYLTPDAKAHFETVTSMLDALEIPYEIDSNM-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT  ++E       M+E  K     ++  GGRY+ LV    G   P  GF++GI RL
Sbjct: 261 LDYYTHTIFEI------MSEAPKMGAQATICAGGRYNHLVEELGGPETPGFGFALGIERL 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +++ E     + E+       +    ++  +     Q +R  G  A+      +   
Sbjct: 315 LITMEAEEVVIPALNELDA---YVVGLGQETNLEALKVVQAIRNFGFSADRDF-MDRKAK 370

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            Q K AD++   L +  G  E +  ++ IK +A  +E    + +  +  +    ++T
Sbjct: 371 AQFKSADKQGARLVLTLGETELAEQVINIKSMASREEKQFPLADLYARFDEIYDEMT 427


>gi|90021082|ref|YP_526909.1| histidyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|89950682|gb|ABD80697.1| histidyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 423

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 100/468 (21%), Positives = 188/468 (40%), Gaps = 64/468 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   ++  +   +  ++  +++ YG+  I  P+LE ++   + + +  D  
Sbjct: 3   KIQALRGMNDLLPQDSPVWQYLESTVTTLFKRYGYQEIRFPILEQTELFKRSIGEVTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF---PCRTYRIGPVFRNEKHGPG 123
            K +++ +D + + ++LR + TA   R   +N           + +  GP+FR EK   G
Sbjct: 63  EKEMYTFKDRNDESLTLRPEGTASCVRACEQNQLLFNRGTLTQKLWYQGPMFRYEKPQKG 122

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGI 178
           R RQF Q  V+  G +    DAE+ +M A   + +GI        +     + R      
Sbjct: 123 RLRQFHQFGVEAFGLNGPDIDAELLIMSARLWKELGISSAVELQLNSLGSSDARAKFKAD 182

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        ++L+E        D   + G   +++L  +     +           ++  
Sbjct: 183 LVAFLEQHKERLDE--------DSQRRLGSNPLRILDSKEAKTQA---------LLDEAP 225

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  +      +L  L+                               I+  +VRG
Sbjct: 226 SLLDYLDDESLAHFEQLKALLDAAGVA-----------------------YTINPRLVRG 262

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E +          +    G+V  GGRYDGLV++  GQ  PA GF +GI RL
Sbjct: 263 LDYYGKTVFEWVTT--------QLGSQGTVCAGGRYDGLVNQLGGQPTPAVGFGMGIERL 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKN 416
           ++ L+ +      I +   V I  +    D         + +R     +R +   G   +
Sbjct: 315 VLLLQEMNVLPEEIFQTLDVYIMAVG---DVAPAAFSLAEQIRDRFPAMRVQTHCGGG-S 370

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK-ELSREIKNN 463
           F NQ+K ADR    +A+I G  E +   + +K L K + + + +  + 
Sbjct: 371 FKNQMKKADRSGADVALILGENEVAAQEVTLKYLRKDQPQTTIKQTDL 418


>gi|312977238|ref|ZP_07788986.1| histidine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310895669|gb|EFQ44735.1| histidine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 428

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 107/465 (23%), Positives = 181/465 (38%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D    +     ++ ++ RN +    +  I TP  E  +   +   D  + 
Sbjct: 1   MRVQKPKGTVDILPDQSGSWQKVEETARNFFNRANYREIRTPSFENYEIFARSSGDSSEI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   E+         P   + +   FR E+   
Sbjct: 61  VEKQMYDFDDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GSS   +D +  MM  D L  +G+K    HI        R+     
Sbjct: 121 GRQREFHQIGVESFGSSNPLSDVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRQDYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D              +  
Sbjct: 181 LVNYFTPLKDELSE--------DSQRRLRDNPLRILDSKDERDKKF---------LPKAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  D + +   + +++          ++L                       VRG
Sbjct: 224 KIREFLDDDSKANFDAILKMLGQLGIDYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRYD LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGIIFEFMVEDKSLWESAT-----TILGGGRYDHLVEEFNGPATPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+    +    +    +     +    +  K     + LR  G  A+  + + K   
Sbjct: 316 MLVLEKQNPALFEKR---GIDFFITNIGDGTAQKAIEIARSLRNQGFEADFDV-NQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           NQ K ADR      I  G  E + G+L IK LA GK +   +++ 
Sbjct: 372 NQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDL 416


>gi|150020638|ref|YP_001305992.1| histidyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166228626|sp|A6LL06|SYH_THEM4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|149793159|gb|ABR30607.1| histidyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 419

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 109/469 (23%), Positives = 194/469 (41%), Gaps = 54/469 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            +  +G  D   ++++    I ++ R I   YG+  I TP+ E ++   + +  + D   
Sbjct: 2   YKKIKGTDDIYGEDMKYWYFIENTAREITRLYGYSEIRTPIFEQTELFVRSVGEETDIVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D   + I+LR + TAP  R   EN       P R + IGP+FR E+   GR R
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAPTIRAFIENSMVATGLPKRLFYIGPMFRYERPQAGRQR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG-ILEKIGLH 185
           QF Q  ++ +GSS+  ADAE  ++    L+++G+      I     +       +K+  +
Sbjct: 122 QFHQFGIELIGSSSSLADAEAIVVADRFLKSLGLVDYTIKINSIGCEKCRAEYKKKLKEY 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             DKL++        D   ++    ++LL  +   +   D              +  +L 
Sbjct: 182 YSDKLDKV-----CDDCKRRYNTNILRLLDCKVDVEYVKD-----------APKITDYLC 225

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + +K   E   ++                              +    +VRGL+YY G 
Sbjct: 226 DNCKKHYEETKNILDKL-----------------------DINYEEDPLLVRGLDYYNGI 262

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            K     ++GGGGRYD L+    GQ  P+ GF++GI RLI+A+K  
Sbjct: 263 VFEI--------HHGKLGAQSAIGGGGRYDNLIKELGGQQTPSLGFAMGIERLIIAVKKE 314

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 IK      +        +  +    ++ LR  GI   +F    +    QLK+A 
Sbjct: 315 GIPVEEIKNNE---VFVAHLGESARIEAIKISEELRDNGISV-VFNTMERGLSAQLKHAS 370

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           R NC L +I G  E  R ++ ++++  G+++  E           + + 
Sbjct: 371 RLNCRLCLIVGENELERNVVILRNMKTGEQIEIERDYIVGTTREWIDEQ 419


>gi|26987590|ref|NP_743015.1| histidyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|148546128|ref|YP_001266230.1| histidyl-tRNA synthetase [Pseudomonas putida F1]
 gi|167031912|ref|YP_001667143.1| histidyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|32130097|sp|Q88PJ6|SYH_PSEPK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166228599|sp|A5VYT6|SYH_PSEP1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189082305|sp|B0KPI8|SYH_PSEPG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|24982266|gb|AAN66479.1|AE016276_14 histidyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|148510186|gb|ABQ77046.1| histidyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166858400|gb|ABY96807.1| histidyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 429

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 103/487 (21%), Positives = 185/487 (37%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + + YG+  I TP++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQSPLWRYFEGTVAGLLDTYGYSQIRTPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNE 118
            +  D   K +++ +D +G  ++LR + TA   R V E+  T      + + IG +FR+E
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLEHGITGNGQVQKLWYIGQMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           +   GR+RQF Q  V+         DAE+ M+       +G                   
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIMLTWRLWGLLGIQDAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +       D    
Sbjct: 177 RYRDALVEFLSARLEQLDE------------DSQRRLKSNPLRILDSK-------DQNTQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVG--APKLEDYLDEESRVHFEGLKARLDAA-----------------------GIPF 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I++ +VRGL+YY+  V+E +          K    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINTKLVRGLDYYSKTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQMGGKPTTGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++GI RLI+ L++L     +I     V +      ++        ++ LR    G+R 
Sbjct: 305 GFAMGIERLILLLETLGKVPESISRQIDVYLCAFGEQAEL--AGLRLSEGLRDRLPGLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
            +  G   +F +Q K AD+     A+I G  E ++  + +K L  +G++ +         
Sbjct: 363 AVNAGGG-SFKSQFKKADKSGALFALILGDDELAKQEIGLKPLRGQGEQQNIAWDALAEH 421

Query: 467 REARVAQ 473
            E  +AQ
Sbjct: 422 LETAIAQ 428


>gi|283852907|ref|ZP_06370168.1| histidyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571736|gb|EFC19735.1| histidyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 421

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 105/479 (21%), Positives = 193/479 (40%), Gaps = 68/479 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K++     GFAD    +  +   I  + R+++  YG+  +  P+LE ++   + +
Sbjct: 1   MDKIQKIK-----GFADLFPPDSTVFAFIEQTARDVFSRYGYRELRVPVLERTELFSRSI 55

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D  G+ ++LR + TA + R + E+        + +  GP+FR E+
Sbjct: 56  GEETDVVQKEMYTFPDRKGRSLTLRPEATAGVMRALIEDKRAGEGLAKFFAYGPMFRYER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR-----NDYHIGINNRKI 174
              GR RQF Q DV+ VGS     DAE+ +M+   L A+G+       N           
Sbjct: 116 PQKGRMRQFHQIDVEAVGSPEPLLDAEVLLMLDQYLRALGLSELTVELNSLGCRECRPVF 175

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           LD + E +     +KL          D + +     +++L  + +     +FT  A    
Sbjct: 176 LDVLREFLKGMHKEKL--------CDDCMRRKLTNPLRVL--DCKVPQCKEFTADA---- 221

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +   L  D  +    +  ++                               ++  
Sbjct: 222 ---PRITDHLCPDCAEHFAAVRRILDAAGLD-----------------------YTLNPR 255

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY    +E +                SV GGGRYDGLV+   G +VP  GF+ G
Sbjct: 256 LVRGLDYYVRTTFEIV--------SGNIGSQSSVAGGGRYDGLVASLGGADVPGVGFACG 307

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL + +                    +  D   L +  +  Q LR AG   E    ++
Sbjct: 308 MERLALLI--------GGVTEAAPDFVLVVLDPAGLDRGLLLAQDLRRAGFAGE-APFAA 358

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K+  +Q++ AD+      ++ G  E ++G + +K++  G + +       ++  AR+ +
Sbjct: 359 KSVKSQMRAADKSGASFCLVLGADELAQGTVVVKNMRAGGQETVGQDLLPAFLRARLEE 417


>gi|253699796|ref|YP_003020985.1| histidyl-tRNA synthetase [Geobacter sp. M21]
 gi|251774646|gb|ACT17227.1| histidyl-tRNA synthetase [Geobacter sp. M21]
          Length = 416

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 93/457 (20%), Positives = 170/457 (37%), Gaps = 54/457 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +     +GF D    E+     I  + R ++E YG   I  P+LE ++   + + D  D 
Sbjct: 1   MAITGIKGFNDILPGEVEKWQYIEATARRVFELYGLSEIRIPILEKTELFCRSIGDATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K ++S  D     +++R + TA + R   E+    +    R Y +GP+FR E+   GR
Sbjct: 61  VEKEMYSFVDKGENKVTMRPEGTASVMRAYVEHKMHALDPVARLYYMGPMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q   +  G +A + DA++  M+      +G+      I          +      
Sbjct: 121 YRQFHQIGAEITGVAAPSVDAQVLTMLTHFFNELGLTEPTLQINSLGCPCCRPLYRDAL- 179

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
               K     I     D   ++    ++ L  +           G    ++    M+ +L
Sbjct: 180 ---KKFLLDRIESLCEDCKRRYESNPLRALDCKS---------AGCQEATKGAPSMLDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +      +  + ++                              I   +VRGL+YYT 
Sbjct: 228 CGECGAHFDQTRKYLE-----------------------LAGTPYAIDKRMVRGLDYYTR 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +                +V  GGRYDGL++   G  +P  GF++G+ R+ + L  
Sbjct: 265 TTFEMVTTL--------LGAQSAVAAGGRYDGLIAEIGGPQIPGIGFAMGVERVALLLAE 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E S           +       ++ ++       L+  G   E+     K+  +Q++ A
Sbjct: 317 KEFSRRP-------DLFIAAMGEEAHAEAFRLMSALQRGGAAVEIDY-EGKSLKSQMRRA 368

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           D+ N    +I G  E SRG   +KD+  G +    + 
Sbjct: 369 DKFNSRFTLIIGGDELSRGTAPLKDMDGGTQSEVPLS 405


>gi|190574115|ref|YP_001971960.1| histidyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229558745|sp|B2FPL6|SYH_STRMK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|190012037|emb|CAQ45659.1| putative histidyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 464

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 144/506 (28%), Positives = 232/506 (45%), Gaps = 64/506 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGTLELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQ------------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
               V+ +Q            D     ++LR+DLT PLARYVAE+   + FP R Y++  
Sbjct: 62  ---QVYFVQSTGALANAAESGDRSLPEMALRFDLTVPLARYVAEHEHELTFPFRRYQMQR 118

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GRFR+F QCD+D +G  + +   +  ++         ++  D+ I +NNRK
Sbjct: 119 VYRGERAQRGRFREFYQCDIDVIGKDSLSVRYDAEVLAVIHAVFSELRIGDFSIQLNNRK 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           ++ G  E +G+   ++   +L VLR +DKLDK G   V+  L            +G  + 
Sbjct: 179 LMRGFFESLGVAEGER---QLAVLREVDKLDKRGADYVRETL----------VGEGFEIP 225

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELV------KGTIAGEKGFNELVVISELVRKSGYNSN 287
           +EQ++ +++F+++  +     L +L         +     G  EL  + +LV+  G    
Sbjct: 226 AEQVEKILAFVAVRSQGHADALAQLATLEADAGSSEILRTGVAELREVLQLVQALGVPET 285

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
              ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S +    +P
Sbjct: 286 AYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYEDLASHYSKSKLP 337

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             G SIG+SRL   L+          E   V       D   + +     + LR  GI  
Sbjct: 338 GVGISIGLSRLFWQLREAGLIDGI--EGSSVQALVALMDEQGMPQSLDIARRLRAGGINT 395

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E+ +   K  G Q +YA +      ++ G  E +RG++ +KDL                 
Sbjct: 396 EVQM-EPKKIGKQFQYAAKAGIRFVVLAGEDELARGVVAVKDL----------------- 437

Query: 468 EARVAQITIPISELVSTVKKILQENK 493
             R  Q  +    L ST++  L+++K
Sbjct: 438 -LREQQFEVSRDGLASTLQVELEQSK 462


>gi|21673075|ref|NP_661140.1| histidyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|32130115|sp|Q8KFT6|SYH_CHLTE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|21646145|gb|AAM71482.1| histidyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 430

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 95/477 (19%), Positives = 178/477 (37%), Gaps = 59/477 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
           + +  +G  D    EI   + +   + ++   YGF  I TP+ EY++   + +    D  
Sbjct: 3   QFQGVKGTRDIFPDEISRWHYVEGVVHSVAALYGFSEIRTPVFEYTELFQRGIGATTDIV 62

Query: 67  NKGVFSLQ-DDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            K +F+   D +G+ ++LR ++TA + R   + N  +     + + I  +FR E+   GR
Sbjct: 63  GKEMFTFLPDPNGRSLTLRPEMTAGVMRACLQKNLLSQAPVHKLWYISDLFRKERPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILE 180
            RQF Q   + +G S   A AE+  +M    E +G+      I      ++R      L 
Sbjct: 123 QRQFTQFGAELLGVSNPAAVAEVLTLMMQVFETLGLHGLRLRINSLGDLDDRARYREALR 182

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 +  L          D+L K  L+   L + + +     +   GA      +   
Sbjct: 183 AYFQPYEADL----------DELSKERLKKNPLRILDSKNPALQEMIMGAPRLYHSLKP- 231

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                                     +   E   +   +           +   +VRGL+
Sbjct: 232 --------------------------ESVAEFEQVLAYLDDR---QIAYNVDHLLVRGLD 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLI 359
           YY    +E            +     ++GGGGRYDGL        ++PA GF++G+ RL+
Sbjct: 263 YYCHTAFEVT--------SSELGAQDAIGGGGRYDGLARELGASADLPAVGFAVGMERLM 314

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + ++              V +       +           LR AGI+ E+ L   ++   
Sbjct: 315 IVMEKQGLFATLNPHGPLVSVII--QQKELAGHAMQVAFHLRKAGIKTEIDLAE-RSMKA 371

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           Q++ A+R     A+  G  E   G+  +K+L   ++ S ++           A+ ++
Sbjct: 372 QMRDANRMGSAYALFVGQSEFESGIYALKNLVTSEQTSLDLDAIIEVLREPAARESL 428


>gi|312139505|ref|YP_004006841.1| histidine-tRNA ligase hiss [Rhodococcus equi 103S]
 gi|311888844|emb|CBH48156.1| histidine-tRNA ligase HisS [Rhodococcus equi 103S]
          Length = 426

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 99/471 (21%), Positives = 178/471 (37%), Gaps = 68/471 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K        P+G  D    +      + D +       G+  IE P+ E +    + +
Sbjct: 1   MSKSGLSTFSAPKGVPDYVPPQSAEFVAVRDGLTRAARLAGYGHIELPIFEDTGLFARGV 60

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 61  GESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHGLDRGQLPVKLSYAGPFFRYE 120

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +      ++G            D      
Sbjct: 121 RPQAGRYRQLQQVGVEAIGVDDPALDAEVIAIADAGFRSLGLDGFRLEITSLGDDTCRPQ 180

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   L  + L  D +    +  LR +D         V+ +  +             
Sbjct: 181 YRERLQEFLFGLDLDEDTRRRAEINPLRVLDDKRPH----VREMTAD------------- 223

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   +M+  LS   +    E+   +                               
Sbjct: 224 ------APLMLDHLSESAKAHFDEVLAHLDAL-----------------------GVPYV 254

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +   G
Sbjct: 255 VNPRMVRGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQPLSGIG 306

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           + +G+ R I+AL +   S  N        +  +   + + ++       LR AGIR +M 
Sbjct: 307 YGLGVDRTILALAAEGKSAGNPARCE---VFGVPLGAAAKTEMVKIAHALRAAGIRVDMV 363

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            G  +     +K ADR    +A++ G  + + G + +KDL+ G++ S  ++
Sbjct: 364 YG-DRGIKGSMKAADRSGARIALVLGDEDLAAGTIAVKDLSNGEQTSVAME 413


>gi|289522218|ref|ZP_06439072.1| histidine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504054|gb|EFD25218.1| histidine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 422

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 107/471 (22%), Positives = 192/471 (40%), Gaps = 58/471 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + PRG  D    E      +L++ R +   +G++ +  PL E+++   + + D  D  
Sbjct: 3   IIKAPRGVRDILPDEAWKWAYVLETSRKVAGFFGYNEVHLPLFEHTELFSRGIGDSTDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D  G+ ++LR +LTA + R   E+     V P + +  GP+FR E+   GR+
Sbjct: 63  EKEMYTFLDRAGRSLTLRPELTASMVRCYLEHGMSKKVQPVKLWSAGPMFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILEK 181
           RQF Q DV+ +GS A   D E+         A+G+       +       R      L++
Sbjct: 123 RQFWQLDVEALGSEAPEVDLEIIAFAIYLFNALGLSNLEVVINSVGCPVCRPGYRDALKR 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D L             ++F    +++L  + + +   +  K A         +V
Sbjct: 183 YVGSNFDAL--------CNTCQNRFERNPLRIL--DCKNERCREIMKDA-------PGIV 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L ++  +    + E +       K    L                       VRGL+Y
Sbjct: 226 DYLCVECSEHFKRVKEGMTILGINYKEDKNL-----------------------VRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E +          +     +V GGGRYD L     G +VP  GF+ GI R+++ 
Sbjct: 263 YTKTAFEVL--------SGELGAQNAVCGGGRYDNLAETIGGPHVPGVGFAAGIERIVLT 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++       +  +   + +  +  D  + +K       LR   I  +M   + K+ G+QL
Sbjct: 315 MEGQG---CDFGQQPGIDVFIVTADDLAKNKALKLLYDLRREQISVDMDY-TGKSIGSQL 370

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           K A  +   LA I G  E  +G++ +KDL KG +      +   + +A +A
Sbjct: 371 KTASNKEAKLACILGGVEIEKGVVTVKDLRKGSQSEVANDSFIDYVKANLA 421


>gi|227890124|ref|ZP_04007929.1| histidyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849299|gb|EEJ59385.1| histidyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 428

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 109/465 (23%), Positives = 183/465 (39%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G  D    E     ++    RN ++   +  I TP  E  +   +   +  D 
Sbjct: 1   MKVQRPKGTVDILPGESGSWEKVESIARNFFKRANYREIRTPSFENYEVFSRSSGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
            +K ++   D  G+ I+LR + TA + R   EN         P   Y I   FR E+   
Sbjct: 61  VSKEMYDFNDKGGRHIALRPEGTAGVVRAYVENKLYGPDVVKPFSVYYIDNTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS +  AD E  MM  D L  +G+K  + HI        R+     
Sbjct: 121 GRQREFHQIGVESFGSDSPLADVETLMMAHDLLAELGVKNYELHINSLGNAQVREAYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D                 
Sbjct: 181 LVNYFTPVKDQLSE--------DSQRRLSQNPLRILDSKDERDKKF---------LPNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +V +L  +  KS   + ++++         ++L                       VRG
Sbjct: 224 KIVDYLDDESRKSFKTITDMLEQLGINYVMDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGIIFEFMVEDKNLWESAT-----TILGGGRYNHLVEEFDGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK       ++ +   +     +  + +  K     + LR  G  A+  +   K   
Sbjct: 316 MLVLKEQN---PDLFQEEGIDFFITNIGAGTEFKAVEVARSLREQGFSAQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q + ADR +    I  G  E   G+L IK L+ GK +   +++ 
Sbjct: 372 QQFRKADRVHATFVITLGAKELENGVLNIKRLSDGKIIDLSLEDI 416


>gi|227431712|ref|ZP_03913742.1| histidyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352536|gb|EEJ42732.1| histidyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 433

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 106/468 (22%), Positives = 184/468 (39%), Gaps = 55/468 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      + P+G AD   ++      +    R ++ +Y F  I TPL E  +   +  
Sbjct: 1   MAKP---IFQRPKGTADLLPQKTVQWQHVEAVARVLFGDYNFKEIRTPLFENFEVFSRSA 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFR 116
            D  D   K ++   D   + I+LR + TA + R   EN         P + + +GP+FR
Sbjct: 58  GDTSDVVTKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEFDKPYKAFYMGPMFR 117

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY-HIGINNRKIL 175
            E+   GRFRQF Q   +  GS +   DAE+  M+ D  + +G+K        + +++  
Sbjct: 118 YERPQAGRFRQFHQIGAEIFGSDSPALDAEVIAMVIDFFQTLGLKNLKVAINTLGDKESR 177

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           D   + +  +     +E      + D   +     +++L  +   D          L   
Sbjct: 178 DAYRQALIDYLKPHFDEL-----SADSQARLEKNPLRVLDSKDPRDQ---------LFVA 223

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++ FLS    K   +L +++                               I +T+
Sbjct: 224 DAPSILDFLSEKSTKHWEKLQDILTALNLD-----------------------FDIDTTM 260

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   ++E +     +          ++ GGGRY GLV  F G   P  GF IG+
Sbjct: 261 VRGLDYYNDTIFEIMTTDESLKGAA------TIAGGGRYSGLVEEFGGPETPGVGFGIGV 314

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RL+  L++   +    + +   ++   D             Q +R+ G  AE     SK
Sbjct: 315 ERLLDLLQAQNVAPTEEQNLDFYVVNIGDTTDVI---ATKIVQAVRSFGYVAERDY-LSK 370

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +   Q K ADR +    I  G  E    ++ IK++  G++ S ++   
Sbjct: 371 SAKAQFKAADRHHAKYVITIGEQELEEQIVNIKNMTNGEQKSVQLSEL 418


>gi|225619394|ref|YP_002720620.1| Histidyl-tRNA synthetase, class IIa [Brachyspira hyodysenteriae
           WA1]
 gi|225214213|gb|ACN82947.1| Histidyl-tRNA synthetase, class IIa [Brachyspira hyodysenteriae
           WA1]
          Length = 416

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 105/469 (22%), Positives = 194/469 (41%), Gaps = 62/469 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           L  + PRG  D      +    I + I+NI + YG+  I TPL EY+D   + + +  D 
Sbjct: 2   LDIKKPRGTNDFFYDSSKRLEYIENKIKNIVKLYGYGRIRTPLFEYTDLFTRGIGEGTDI 61

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGR 124
             K +F+ +D  G+ ++LR + TA +AR   EN     F     + +G ++R E+   GR
Sbjct: 62  VGKEMFTFEDRGGRSLTLRPEGTASVARAYVENSMQNEFAINKLFYLGTMYRAERPQKGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILE 180
           +R+F Q  V+ +G+S+   DAE+ ++  + L+  GI       +       +   +  L+
Sbjct: 122 YREFNQFGVECIGNSSPLIDAEIILLNINVLKEFGIDNVNLLINTVGCSKCKPSYNNALK 181

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      ++L E                +G  L + + + +   +  K        I   
Sbjct: 182 EAIGSRKEELCETCQKRY----------EGNILRILDCKNEKCKETIKD-------IPKF 224

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             ++  + ++    L E +                               +   +VRGL+
Sbjct: 225 YDYVCDECKEHFDRLCEELT-----------------------RIGQNFTVDPMLVRGLD 261

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG-QNVPATGFSIGISRLI 359
           YYT   +E                  ++ GGGRYD L+  F   ++VPA G ++GI RL+
Sbjct: 262 YYTKTAFEVQTNA--------LGAQSAILGGGRYDNLIGIFNNGKDVPAVGSAMGIERLL 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L++  +   +  +   V         ++ ++     Q LR   I  +    + K+  +
Sbjct: 314 LVLENQNNIITDRLDAFIVAF------KETENEVLKIMQTLRANNISCDYDF-AVKSIKS 366

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           Q K A++RN   A++ G  E  RGM ++K++  G+E    I +     E
Sbjct: 367 QFKSANKRNAKYAVVLGEDEFKRGMCKLKNMDSGEEKEISINDIHKNIE 415


>gi|240255269|ref|NP_186925.4| ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/
           nucleotide binding [Arabidopsis thaliana]
 gi|332640336|gb|AEE73857.1| histidyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 883

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 130/494 (26%), Positives = 218/494 (44%), Gaps = 55/494 (11%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFL 60
             + +   +LP+G  D   +++ +R +    I+N+++ +G   ++TP+ E  ++L GK+ 
Sbjct: 439 SNENRRLPKLPKGTRDFAKEQMAVREKAFSIIQNVFKRHGATALDTPVFELRETLMGKYG 498

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D    +K V+ + D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +  
Sbjct: 499 ED----SKLVYDIADQGGELCSLRYDLTVPFARYVAMNG---ITSFKRYQIAKVYRRDNP 551

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F QCD D  G           + +   L    ++  DY + +N+RK+LDG+LE
Sbjct: 552 SKGRYREFYQCDFDIAGLFEPMGPDFEIVKILTELLD-ELEIGDYEVKLNHRKLLDGMLE 610

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  +    +   +  +IDKLDK   + VK  + E              L+SE  D +
Sbjct: 611 ICGVPPE----KFRTICSSIDKLDKQSFEQVKKEMVEE-----------KGLSSEIADRI 655

Query: 241 VSFLSIDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            +F+            + +         +  +  +EL ++ E +++S   S RI    ++
Sbjct: 656 GNFVKEKGAPLELLSKLRQEGSEFLDNQSSREALDELSIMFEALKRSKC-SERIVFDLSL 714

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
            RGL+YYTG ++EA+               GS+G GGRYD L+  F  + VPA G S+GI
Sbjct: 715 ARGLDYYTGVIFEAVC---------IGAEVGSIGAGGRYDNLIGMFGTKQVPAVGMSLGI 765

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R+   ++ L      +       +       + L++       L  A I AE +L S +
Sbjct: 766 ERVFNIMEELNEKQKQVIRPTETQVLVSIMVDNKLAEAAELVSQLWGAKINAE-YLVSKR 824

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
                   A     P  ++ G  E S   + +K L KG E   +               T
Sbjct: 825 K-EKHFNRAKESGIPWMVMVGEKELSGSFVTLKKLEKGSEEKED--------------QT 869

Query: 476 IPISELVSTVKKIL 489
                 V  +KK+L
Sbjct: 870 CTRDRFVEELKKLL 883


>gi|317138237|ref|XP_001816776.2| histidyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 636

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 121/535 (22%), Positives = 211/535 (39%), Gaps = 71/535 (13%)

Query: 1   MGK-KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           MGK K     + P+G  D    +  +R+RI  +I ++++ +G   ++TP+ E  + L   
Sbjct: 115 MGKEKNNFNLKTPKGTKDWSGSDALLRDRIFTTIADVFKRHGGTALDTPVFELREILAGK 174

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                   
Sbjct: 175 YGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRSMKRYHIAKVYRRDQPA 231

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR R+F QCD D  G+          + +   +      +  Y I IN+RKILDG+ 
Sbjct: 232 VSKGRMREFYQCDFDVAGTFDPMVPDAEVLKIVTEVFEELGWQGRYSIKINHRKILDGVF 291

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E  G+  D    +   +  A+DKLDK     V+  + E              L     D 
Sbjct: 292 EVCGVPAD----KIRPISSAVDKLDKMPWADVRKEMVEE-----------KGLDGAVADK 336

Query: 240 MVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           + +++     + + E     E +    + + G  ++ ++ + +   G   +RI    ++ 
Sbjct: 337 IETYVVKKGTRDLLETLLKDEALLANASAKAGLEDMGLLMDYLEAFGVL-DRISFDMSLA 395

Query: 297 RGLEYYTGCVYEAIL-----------------------------GFPVMNEKQKPVVFGS 327
           RGL+YYTG +YE +                                         +  GS
Sbjct: 396 RGLDYYTGVIYEVVTEGSAPAVSSSAPEAEKLQKSGKKSKSKGNADDDDRSNDPTLGVGS 455

Query: 328 VGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVA----LKSLESSTNNIKEMGPVLITT 382
           V  GGRYD LV  F     +P  G S G+ R+       L+  +S+           +  
Sbjct: 456 VAAGGRYDNLVGMFLPKAQIPCVGVSFGVDRIFSITKARLEREKSAEALRSSEVDAFVMA 515

Query: 383 MDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
                    L +     Q L  AG++AE           Q K A++   P A+I G  E 
Sbjct: 516 FGGKGFTGMLKERMNVCQTLWNAGVKAEFSYKVKPKLPQQFKAAEQGGVPFAVILGEDEL 575

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           + G ++IK++         +++    +E     + + ++ L + VK  +   +++
Sbjct: 576 AEGKVRIKEM--------GLEDGHPEKEG----VLVDLASLPAEVKARVARKRDQ 618


>gi|227538734|ref|ZP_03968783.1| histidine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241243|gb|EEI91258.1| histidine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 461

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 138/479 (28%), Positives = 220/479 (45%), Gaps = 59/479 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  L +G  D    E+  RN I +++++++  YG+  I+TP  E   +L GK+  + D  
Sbjct: 5   KPSLAKGTRDFSPAEMEKRNYIFNTLKSVFRKYGYQEIQTPSFENLQTLTGKYGDEGD-- 62

Query: 67  NKGVFSLQDDDG---------------QWI-------SLRYDLTAPLARYVAENFDTIVF 104
            K +F + +                    +       +LRYDLT P ARYV      I  
Sbjct: 63  -KLIFKILNSGDYLSKAPDALLAEKASNSLIPHLSEKALRYDLTVPFARYVVMRQHEISL 121

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + ++I PV+R ++   GR+R+F QCDVD VGS +   +AE  ++  + L A+G+K  D
Sbjct: 122 PFKRFQIQPVWRADRPQRGRYREFYQCDVDVVGSESLLNEAEFILIYQEALRALGLK--D 179

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
           + I INNRKIL GI E IG          + +  AIDKLDK GL+GV   L E       
Sbjct: 180 FAIKINNRKILSGIAEIIGKPE-----LIVDMTVAIDKLDKIGLEGVNKELLE------- 227

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
              +G       I   +  L       + +L  ++  +  G +G  EL  +   + +   
Sbjct: 228 ---RGFTEADLAILRPIILLEGSTASKIEQLRSVLAKSETGLRGVAELEEVFAYLNQLDV 284

Query: 285 N----SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           +       +++  T+ RGL YYTGC++E          K   V  GS+GGGGRYD L   
Sbjct: 285 SGEVFDKYVELDITLARGLNYYTGCIFEV---------KTNEVSMGSIGGGGRYDDLTGM 335

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           F  + +   G S G  R+   L+ L     +  +   +LI   +   ++ +        L
Sbjct: 336 FGLKGLTGVGVSFGADRIYDVLEELNLYPQHESDNTRLLIVNFEKSIEAFT--LPLLNRL 393

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           R AGI  E++  + K    Q+ YAD +  P  ++ G  E + G L +K++  G++    
Sbjct: 394 RQAGIAVELYPQAVK-LKKQMSYADDKRIPYVLLVGEEEVNTGQLSLKNMNSGEQQKLS 451


>gi|295661123|ref|XP_002791117.1| histidyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226281044|gb|EEH36610.1| histidyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 601

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 123/534 (23%), Positives = 220/534 (41%), Gaps = 75/534 (14%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           MGK+      + P+G  D    +  +R+RI +SI  +++ +G   ++TP+ E  + L   
Sbjct: 71  MGKEKVSFNLKTPKGTKDWFGADGLLRDRIFNSITEVFKRHGATSLDTPVFELREILAGK 130

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N +  +   + Y I  V+R ++
Sbjct: 131 YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPN--IRSIKRYHIAKVYRRDQ 185

Query: 120 H----GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
                G  R       D+          DAE+  +  +  E +G  +  Y I +N+RKIL
Sbjct: 186 PAMSKGRMREFYQCDIDIAGANYDPMVPDAEILRIATEVFEGLG-WKGSYTIKVNHRKIL 244

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           DG+ E  G+  +    +   +  A+DKLDK     V+  + E              L   
Sbjct: 245 DGLFEVCGVPKE----KIRTISSAVDKLDKLPWVDVRKEMVEE-----------KGLDGA 289

Query: 236 QIDIMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             D + +++     + + +     E +    + + G  E+  + + +       ++I   
Sbjct: 290 VADKIETYVVRKGGRELLQSLQTDEALVANPSAKAGLEEMGHLIDYLEAFDIL-DKISFD 348

Query: 293 STIVRGLEYYTGCVYEAIL---------------------------GFPVMNEKQKPVVF 325
            ++ RGL+YYTG +YE +                                       +  
Sbjct: 349 MSLARGLDYYTGVIYEVVTEGSAPAEVPSTGEEAQKSQRESKSKSKNDDDDRSNDPSIGV 408

Query: 326 GSVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTM 383
           GS+  GGRYD LV  F  +  +P  G S G+ R+    K+ +E    N+ ++  V +  M
Sbjct: 409 GSIAAGGRYDELVGMFSNRAQIPCVGISFGVDRIFSITKARMERENTNVSKLSEVDVYVM 468

Query: 384 DHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
                     L +     + L  AGI+AE           Q + A+    P A+I G  E
Sbjct: 469 AFGGKGFTGLLKERMDVARRLWDAGIKAEFSYKRKPKPQQQFEAAEANAVPFAVIVGEDE 528

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            + G +++K++  G E     K+           + + +S L   VK +L+  +
Sbjct: 529 LANGQVRVKEM--GLEKGHPEKD----------GVLVDLSTLAEEVKALLERKR 570


>gi|42519262|ref|NP_965192.1| histidyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|46396581|sp|P60916|SYH_LACJO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|41583550|gb|AAS09158.1| histidyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|329667228|gb|AEB93176.1| histidyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 428

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 107/465 (23%), Positives = 183/465 (39%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G  D    E     ++    RN ++   +  I TP  E  +   +   +  D 
Sbjct: 1   MKVQRPKGTVDILPGESGSWEKVESIARNFFKRANYREIRTPSFENYEVFSRSSGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
            +K ++   D  G+ I+LR + TA + R   EN         P   Y I   FR E+   
Sbjct: 61  VSKEMYDFNDKGGRHIALRPEGTAGVVRAYVENKLYGPDVVKPFSVYYIDNTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS +  AD E  MM  D L  +G+K  + HI        R+     
Sbjct: 121 GRQREFHQIGVESFGSDSPLADVETLMMAHDLLAELGVKNYELHINSLGNAQVREAYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D                 
Sbjct: 181 LVNYFTPVKDQLSE--------DSQRRLSQNPLRILDSKDERDKKF---------LPNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +V +L  +  ++   + ++++         ++L                       VRG
Sbjct: 224 KIVDYLDDESRENFKTITDMLEQLGINYVMDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGIIFEFMVEDKNLWESAT-----TILGGGRYNHLVEEFDGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK       ++ +   +     +  + +  K     + LR  G  A+  +   K   
Sbjct: 316 MLVLKEQN---PDLFQEEGIDFFITNIGAGTEFKAVEVARSLREQGFSAQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q + ADR +    I  G  E   G+L IK L+ GK +   +++ 
Sbjct: 372 QQFRKADRVHATFVITLGAKELENGVLNIKRLSDGKTIDLSLEDI 416


>gi|170733171|ref|YP_001765118.1| histidyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|206560246|ref|YP_002231010.1| histidyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|229558659|sp|B1JT91|SYH_BURCC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558660|sp|B4EAW8|SYH_BURCJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|169816413|gb|ACA90996.1| histidyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|198036287|emb|CAR52183.1| histidyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 446

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 100/502 (19%), Positives = 197/502 (39%), Gaps = 66/502 (13%)

Query: 1   MGKKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M ++ +   +L   +G  D   ++  +      +++++   YG+  I TP++E++    +
Sbjct: 1   MTEQKRKIEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR
Sbjct: 61  GIGEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         
Sbjct: 121 HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEER 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +                ++ 
Sbjct: 181 AAHRVELIKYLEQFADVLD----EDAKRRLYTNPLRVLDTKNPALQD---------IAQN 227

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL  +       L  L+                          +   KI+  +V
Sbjct: 228 APKLIDFLGDESRAHFEGLQRLLLAN-----------------------NIPFKINPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI 
Sbjct: 265 RGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK- 415
           R++  LK  + +     E   V +  +     +  +  +  + LR  G+       +   
Sbjct: 317 RILELLKEEDLAP----EQEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSADGA 372

Query: 416 --NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             +F +Q+K AD      A+I G  E + G + +K L                   +  Q
Sbjct: 373 PASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALR-----------GAGAEGEKNVQ 421

Query: 474 ITIPISELVSTVKKILQENKEE 495
            T+P+  L   +   +  + E+
Sbjct: 422 QTVPVESLTEFLINAMVASAED 443


>gi|330718278|ref|ZP_08312878.1| histidyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 433

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 185/468 (39%), Gaps = 55/468 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      + P+G AD   ++      +    R ++ +YGF  I TP  E  D   +  
Sbjct: 1   MAKP---IFQRPKGTADLLPQQTEQWQHVEGIARLLFGDYGFKEIRTPHFENFDVFSRSA 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFR 116
            D  D   K ++   D   + ++LR + TA + R   EN         P + + IGP+FR
Sbjct: 58  GDTSDVVTKEMYDFYDKGDRHMALRPEGTAGIVRAYVENKLYGPEFDKPYKAFYIGPMFR 117

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY-HIGINNRKIL 175
            E+   GRFRQF Q   +  G+ +   D E+  M  D  + +G+K        + ++   
Sbjct: 118 YERPQAGRFRQFHQIGAEAFGAVSPALDVEIIAMAVDFFKTLGLKNLKVAINTLGDKTSR 177

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           D   + +  +     +E      + D  ++     +++L  +   D              
Sbjct: 178 DAYRQALIDYLKPHFDEL-----SHDSQERLEKNPLRVLDSKDPKDQIF---------VA 223

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++ +L+ + +     + EL+       +                       + +++
Sbjct: 224 DAPSILDYLTPESQNHWQRVQELLTALDLDFE-----------------------VDTSM 260

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   ++E +     +          ++ GGGRY GLV +F G   P  GF IG+
Sbjct: 261 VRGLDYYNDTIFEIMTADESLKGSA------TIAGGGRYSGLVEQFGGPETPGVGFGIGV 314

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RLI  L++        K    +    ++   D+ +      Q +R+ G  AE     ++
Sbjct: 315 ERLIGLLEAQ---HVTFKNDNDLDFYVVNIGDDTDTIATQIVQAIRSYGYMAERDY-LAR 370

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +   Q K ADR +    +  G  E +    ++K++  G++L  ++ + 
Sbjct: 371 SPKAQFKSADRGHAKFVVTIGEQELANHSAKLKNMLTGQQLDVKLADL 418


>gi|323491632|ref|ZP_08096811.1| histidyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323314208|gb|EGA67293.1| histidyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 412

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 103/467 (22%), Positives = 184/467 (39%), Gaps = 69/467 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             DC   +  +  ++ ++++N+   YG++ +  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDCLPTQSPLWQKLENTVKNVISAYGYNEVRMPIVEMTHLFSRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  ++LR + TA   R   EN        R + +GP+FR+E+   GR+RQF QC V
Sbjct: 61  EDRNGDSLTLRPEGTAGCVRSCIENSLIDRSEQRLWYMGPMFRHERPQKGRYRQFHQCGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILEKIGL 184
           +  G      DAE+ MM A     +G                   N R  L   LE+   
Sbjct: 121 EVFGLDGPDVDAELIMMTARLWRELGIDKHVRLELNSIGSLEDRANYRTALIAFLEQHID 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             DD            D   +     +++L  +                      +  +L
Sbjct: 181 ILDD------------DCKRRMHTNPLRVLDTKN---------PDVQAILGDAPRLSDYL 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + ++    L EL+                               ++  +VRGL+YY  
Sbjct: 220 GEESKQHFAGLCELLDAA-----------------------GIEYSVNQRLVRGLDYYNR 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E I         +     G+V GGGRYDGLV +  G+  PA GF++G+ RL++ L++
Sbjct: 257 TVFEWIT--------ESLGAQGTVCGGGRYDGLVEQLGGKATPAVGFAMGLERLVLMLET 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLK 422
           LE +         V +  +     ++       + LR    G+R  M      NF  Q K
Sbjct: 309 LELTEVRRS----VDVYMVTAGEGTMLAGMKLAETLREQVPGLRV-MSHFGGGNFKKQFK 363

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            AD+    +A++ G  E +   + +KDL  G + +    +  +    
Sbjct: 364 RADKVGAAVALVLGENEVADNTVVLKDLIGGTQETYSQADVIAKLSE 410


>gi|194476950|ref|YP_002049129.1| histidyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191957|gb|ACB42919.1| histidyl-tRNA synthetase [Paulinella chromatophora]
          Length = 422

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 106/446 (23%), Positives = 182/446 (40%), Gaps = 50/446 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   +   +   I ++ R  +   G + I TPLLE ++   + + +  D  
Sbjct: 3   KLQNLRGMVDLLPEHTPLWQFIEETARTHFRRSGVNEIRTPLLEPTELFARGIGESTDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           NK ++S  D   +  +LR + TA + R   ++      P R +  GP+FR E+   GR R
Sbjct: 63  NKEMYSFFDRGDRSCTLRPEGTASIVRAALQHNLLAQGPQRFWYSGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  ++  G S   +D E   +  D L  +G+K          R  L+  L  +G   
Sbjct: 123 QFHQIGLELHGYSDPRSDVEAISIAWDLLMDLGVK----------RLALE--LNTLGSIS 170

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D  L                     +  L    +D+  +  + +        + +    I
Sbjct: 171 DRILY--------------------RQKLETWLSDHFNELDEDSRARVSSNPLRILDSKI 210

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              K + +   L+   ++  +       + E +   G      KI+  +VRGL+YY+   
Sbjct: 211 PSTKELLKKAPLLSNELSA-ESSERFAAVREGLANLGIP---FKINPYLVRGLDYYSHTA 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     +V GGGRYDGLV +  G N PA G+++G+ RL++ +    
Sbjct: 267 FEII--------SDQLGAQSTVCGGGRYDGLVEQLGGHNTPAIGWALGVERLVLLIM-QG 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    I          ++    + +      + LR +G+  E+    S  F  Q K ADR
Sbjct: 318 NIPIKIPSPD---FYIINKGKVAEAIALTLARQLRNSGMIVELDCSKSA-FSKQFKRADR 373

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAK 452
            N   AII G  E +R  ++IK+L  
Sbjct: 374 SNALQAIILGEEEVARNQIRIKNLRT 399


>gi|268319357|ref|YP_003293013.1| hypothetical protein FI9785_874 [Lactobacillus johnsonii FI9785]
 gi|262397732|emb|CAX66746.1| hisS [Lactobacillus johnsonii FI9785]
          Length = 428

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 108/465 (23%), Positives = 184/465 (39%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G  D    E     ++    RN ++   +  I TP  E  +   +   +  D 
Sbjct: 1   MKVQRPKGTVDILPGESGSWEKVESIARNFFKRANYREIRTPSFENYEVFSRSSGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
            +K ++   D  G+ I+LR + TA + R   EN         P   Y I   FR E+   
Sbjct: 61  VSKEMYDFNDKGGRHIALRPEGTAGVVRAYVENKLYGPDVVKPFSVYYIDNTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS +  AD E  MM  D L  +G+K  + HI        R+     
Sbjct: 121 GRQREFHQIGVESFGSDSPLADVETLMMAHDLLAELGVKNYELHINSLGNAQVREAYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D                 
Sbjct: 181 LVNYFTPVKDQLSE--------DSQRRLSQNPLRILDSKDERDKKF---------LPNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +V +L                     ++      +I++++ + G       +   +VRG
Sbjct: 224 KIVDYLD--------------------DESRENFKIITDMLEQLG---INYVMDDDLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGIIFEFMVEDKNLWESAT-----TILGGGRYNHLVEEFDGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK       ++ +   +     +  + +  K     + LR  G  A+  +   K   
Sbjct: 316 MLVLKEQN---PDLFQEEGIDFFITNIGAGTEFKAVEVARSLREQGFSAQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q + ADR +    I  G  E   G+L IK L+ GK +   +++ 
Sbjct: 372 QQFRKADRVHATFVITLGAKELENGVLNIKRLSDGKTIDLSLEDI 416


>gi|330793434|ref|XP_003284789.1| histidine-tRNA ligase [Dictyostelium purpureum]
 gi|325085283|gb|EGC38693.1| histidine-tRNA ligase [Dictyostelium purpureum]
          Length = 481

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 128/486 (26%), Positives = 199/486 (40%), Gaps = 51/486 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P+G  D    ++ IR ++ D+I+ +++ +G   IETP+ E  D+L     ++   +K
Sbjct: 40  LKTPKGTQDYNPSQMTIREQVFDTIKQVFKRHGAVTIETPVFELKDTLTGKYGED---SK 96

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++ L D  G+  SLRYDLT P ARYVA N    +             N     GRFR+F
Sbjct: 97  LIYDLADQGGEICSLRYDLTVPFARYVAMNRVQNIKRYHIA-RVYRRDNPVMTKGRFREF 155

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            QCD D  G          C+ +   +    +K   Y I +N+RK+LD I    G+  D 
Sbjct: 156 YQCDFDIAGEYDVMVPDAECLRIICEILD-QVKVGKYVIKLNHRKLLDAIFAICGVPAD- 213

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              +   +  A+DKLDK     V+  + E              L     D +  F+ +  
Sbjct: 214 ---KFRTICSAVDKLDKSPWDEVRKEMVEV-----------KGLDGAIADKIEEFVKLSG 259

Query: 249 E--KSMHELYE--LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
              + + +L    +            +L  +   +   G    RI    ++ RGL+YYTG
Sbjct: 260 PPFELLEKLRTSGMCDSNKDAVDALAQLETLFGYLEALGCTE-RILFDLSLARGLDYYTG 318

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +YEA+L              GS+  GGRYDGLV  +  ++VPA GFSIGI R+   L+ 
Sbjct: 319 IIYEAVLTQQDR--------VGSIAAGGRYDGLVGMYGKKDVPAVGFSIGIERIFTILEE 370

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +            +  +  D + L         L  AGI AE     +     QL  A
Sbjct: 371 EYTKNKLKIRENQTQVYVVQMDKELLKDRLKICSELWNAGINAEFAYKVNPKVAPQLNSA 430

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           +    PL I+ G  E     L +K++   K++S                  IP       
Sbjct: 431 NESLTPLTILIGKTEIETNTLSVKNMKDSKQIS------------------IPRENFTEK 472

Query: 485 VKKILQ 490
           +K++L 
Sbjct: 473 IKELLN 478


>gi|264679422|ref|YP_003279329.1| histidyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262209935|gb|ACY34033.1| histidyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 438

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 94/480 (19%), Positives = 182/480 (37%), Gaps = 64/480 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  KL A   +G  D    +          +R++   + +  + TP++E +    + L
Sbjct: 1   MAKNEKLTA--VKGMNDILPPDSARWEWFEAKVRDLMGRFAYRNMRTPIVEPTALFVRGL 58

Query: 61  PD-EDRPNKGVFSLQDDDG-----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            +  D   K ++S +D        + ++LR + TA + R V EN        R + IG +
Sbjct: 59  GEVTDIVEKEMYSFEDRADKHGQAEHLTLRPEGTAGVVRSVVENNLLYEGGKRLFYIGQM 118

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           FR EK   GR+RQF Q  V+ +G +    DAE+ ++ A   + +GI+             
Sbjct: 119 FRREKPQRGRYRQFHQVGVEALGFAGPELDAEVILLAAQLWKELGIEGVRLE-------- 170

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L  +G   + K +   ++       +    +  + +                    
Sbjct: 171 ----LNSLGQPEERKTHREALIAYFEQHTEVMDEEAKRRMYSNPLR-VLDTKNPAMQEMV 225

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L    +  +  + +++                               ++  
Sbjct: 226 NAAPRLMDYLGDASKAHLKAVQDILDANDVA-----------------------WSLNPR 262

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRG++YY   V+E I          K     ++ GGGRYD L+    G+  PA G+ +G
Sbjct: 263 LVRGMDYYNLTVFEFIT--------DKLGSQSTICGGGRYDYLIEEIGGKPAPAVGWGMG 314

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + R++  LK +              +  +  D+  L +     Q LR AG+  +M   + 
Sbjct: 315 VERVLEVLKEVGVEIPQPAA----DVYAIIPDASVLPQVFKTVQQLRAAGVAVQMHAAAG 370

Query: 415 ------KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESW 466
                  +  +Q K AD      A+I G+ E ++G + +K L  G+  ++ + + +   W
Sbjct: 371 GSAEGMGSMKSQFKKADGSGARFALIFGSDELAQGKVTVKSLRDGEGQQVQQALADVALW 430


>gi|145299530|ref|YP_001142371.1| histidyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166227942|sp|A4SP01|SYH_AERS4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|142852302|gb|ABO90623.1| histidyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 425

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 105/474 (22%), Positives = 182/474 (38%), Gaps = 73/474 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC  ++  +  ++   +R +  +YG+  +  P++E +    + +
Sbjct: 1   MAKQ----IQAIRGMNDCLPEQSPVWQKVEQILRQVVASYGYSEVRMPIVEQTHLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  +SLR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLSLRPEGTASCVRAGIEHGLLYNQERRMWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ M+        GI                   
Sbjct: 117 PQKGRYRQFHQFGVELFGINGPDIDAELIMLTHRLWRLFGISDHVTLQLNTLGQSSERAA 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D++   R+                +++L  +     +       
Sbjct: 177 YRDALVAYLEQYKDQLDEESQRRMYS------------NPLRVLDSKDERVQAILV---- 220

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                +   +   L  +       L  L++      +    L                  
Sbjct: 221 -----KAPRLFDHLGEESLAHFEGLKRLLESAGIKYEVNERL------------------ 257

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY   V+E +               G+V  GGRYDGLV +  GQ  PA G
Sbjct: 258 -----VRGLDYYNLTVFEWVTTS--------LGAQGTVCAGGRYDGLVEQLGGQATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE + +       V +        S        + LR A   +R  
Sbjct: 305 FAMGMERLVLMLETLELNADIRPA---VDVYLAMVGEGSEQAGFQLAERLRDALPDLR-L 360

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIK 461
           M      NF  QLK AD+    +A+I G  E   G + IK L  + ++ +  + 
Sbjct: 361 MSHCGGGNFKKQLKRADKSGAAIALILGETEVQNGEITIKYLRGQAEQQTVTVD 414


>gi|107029010|ref|YP_626105.1| histidyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116689832|ref|YP_835455.1| histidyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123179919|sp|Q1BGX3|SYH_BURCA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227947|sp|A0K7T5|SYH_BURCH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|105898174|gb|ABF81132.1| histidyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116647921|gb|ABK08562.1| histidyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 446

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 100/502 (19%), Positives = 197/502 (39%), Gaps = 66/502 (13%)

Query: 1   MGKKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M ++ +   +L   +G  D   ++  +      +++++   YG+  I TP++E++    +
Sbjct: 1   MTEQKRKIEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR
Sbjct: 61  GIGEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         
Sbjct: 121 HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEER 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +                ++ 
Sbjct: 181 AAHRVELIKYLEQFADVLD----EDAKRRLYTNPLRVLDTKNPALQD---------IAQN 227

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL  +       L  L+                          +   KI+  +V
Sbjct: 228 APKLIDFLGDESRAHFEGLQRLLLAN-----------------------NIPFKINPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI 
Sbjct: 265 RGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK- 415
           R++  LK  + +     E   V +  +     +  +  +  + LR  G+       +   
Sbjct: 317 RILELLKEEDLAP----EQEGVDVYVVHQGDTAREQAFIAAERLRDTGLDVIFHCSADGA 372

Query: 416 --NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             +F +Q+K AD      A+I G  E + G + +K L                   +  Q
Sbjct: 373 PASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALR-----------GAGAEGEKNVQ 421

Query: 474 ITIPISELVSTVKKILQENKEE 495
            T+P+  L   +   +  + E+
Sbjct: 422 QTVPVESLTEFLINAMVASAED 443


>gi|254252258|ref|ZP_04945576.1| Histidyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894867|gb|EAY68747.1| Histidyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 446

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 102/503 (20%), Positives = 197/503 (39%), Gaps = 68/503 (13%)

Query: 1   MGKKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M ++ +   +L   +G  D   ++  +      +++++   YG+  I TP++E++    +
Sbjct: 1   MTEQKRKIEKLTGVKGMNDILPQDAALWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR
Sbjct: 61  GIGEVTDIVEKEMYSFTDALNGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            E+   GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         
Sbjct: 121 LERPHRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEER 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +                ++ 
Sbjct: 181 AAHRVELIKYLEQHVDVLD----EDAKRRLYTNPLRVLDTKN---------PALQEIAQN 227

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL          L  L+                          +   KI+  +V
Sbjct: 228 APKLIDFLGDQSRAHFEGLQRLLLAN-----------------------NVPFKINPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI 
Sbjct: 265 RGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK- 415
           R++  LK  + +     E   V +  +     +  +  +  + LR  G+       +   
Sbjct: 317 RILELLKEEDLAP----EQEGVDVYVVHQGEAAREQAFIAAERLRDTGLDVIFHCSADGA 372

Query: 416 --NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVA 472
             +F +Q+K AD      A+I G  E + G   +K L   G E  + +            
Sbjct: 373 PASFKSQMKRADASGAAFAVIFGEEEVANGTAGVKALRGTGDEGEKNV------------ 420

Query: 473 QITIPISELVSTVKKILQENKEE 495
           Q T+P+  L   +   +  + E+
Sbjct: 421 QQTVPVESLTEFLINAMVASAED 443


>gi|71908597|ref|YP_286184.1| histidyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|83305866|sp|Q47BR7|SYH_DECAR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71848218|gb|AAZ47714.1| histidyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 429

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 104/490 (21%), Positives = 185/490 (37%), Gaps = 67/490 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    E        D+IR+  + YG+ PI  P++E +    + + +  D  
Sbjct: 4   TLQAVRGMNDVLPDEAEFWELFEDTIRSWLKGYGYRPIRMPIVEPTPLFKRAIGEVTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G+ ++LR + TA   R V E+        R Y IG +FR+E+   GR+
Sbjct: 64  EKEMYSFVDGLNGEALTLRPEGTAGCVRAVIEHNLAARQTQRLYYIGQMFRHERPQKGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V++ G +    DAEM +M A     +G+   +  +    +     +     + 
Sbjct: 124 RQFHQVGVESFGMAGPDIDAEMILMGARLWADLGLDGIELQLNSLGQPEERALHRAALIT 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             ++  E    L   D   +     +++L  +                      ++ +L 
Sbjct: 184 YFEENAE----LLDEDAKRRLHTNPLRILDTKNPAMQELCA---------AAPKLIDYLG 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +       +  +++                              I+  +VRGL+YY   
Sbjct: 231 AESLAHFEGVQRVLRDA-----------------------GVPFTINPRLVRGLDYYNLT 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          K    G+V  GGRYDGLV +  G+  PA GF++G+ RLI  ++  
Sbjct: 268 VFEWVT--------DKLGAQGTVCAGGRYDGLVEQLGGKPTPACGFAMGVERLIALIRES 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                         +  +     +  +     + LR  GI   +      +F +Q+K AD
Sbjct: 320 GGEP----AAPAPDVYLVHQGEAAARQAFRVAEGLRDQGINV-LQHCGGGSFKSQMKKAD 374

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                 A+I G  E + G  Q+K L                     AQ+ + + +L   +
Sbjct: 375 GSGATFAVIIGDDEAATGEAQLKSLR----------------AEGSAQLKLKVDDLAEAI 418

Query: 486 KKILQENKEE 495
              L ++ EE
Sbjct: 419 IGQLIDSDEE 428


>gi|288800883|ref|ZP_06406340.1| histidine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332344|gb|EFC70825.1| histidine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 453

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 138/478 (28%), Positives = 214/478 (44%), Gaps = 55/478 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D    E+  RN I ++I+++Y+ YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPNIPKGTRDFSPLEMIKRNYIFNTIKDVYKLYGFQQIETPAMESLQTLMGKYGDEGDKL 63

Query: 65  ---RPNKGVFSLQDDDGQWI--------------SLRYDLTAPLARYVAENFDTIVFPCR 107
                N G +  +  D + +               LRYDLT P ARYV  + + +  P +
Sbjct: 64  LFKILNSGDYLKKVSDDELLQRNPLKLAPQLCEKGLRYDLTVPFARYVVMHREELQMPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI      I
Sbjct: 124 RYQIQPVWRADRPQKGRYREFYQCDADIVGSDSLLNEVELVQIIDTVFTKFGI---RVQI 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL GI E IG          + +  AIDKLDK G+  V   L E          
Sbjct: 181 KINNRKILTGIAEVIGEAEK-----IIDITVAIDKLDKIGIDNVNKELKEN--------- 226

Query: 228 KGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++ E I  +   +++    E  ++ L E++  +  G KG  E   I   +      
Sbjct: 227 ---GISDEAITKLQPIIALKGSNEDKLNTLQEVLSTSEIGLKGIEETRYILNKLSSVNT- 282

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
            N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F    
Sbjct: 283 QNEIELDLTLARGLNYYTGAIFEV---------KALDVAIGSITGGGRYDNLTGIFGMPG 333

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G  R+   L +L+       E     I  ++   + +         LRT G+
Sbjct: 334 ISGVGISFGADRIYDVLNTLDLYPRESAEQT--QILFINFGEEEVDYCLPIATQLRTNGV 391

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             E+F  ++K    Q+ YA+ +  P  +I G  E   G L +K++  G++     +  
Sbjct: 392 FTEVFPDNTK-MKKQMNYANAKQIPFVVIAGENEIKEGKLTLKNMLTGEQSLLTKEEL 448


>gi|240949090|ref|ZP_04753438.1| histidyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296485|gb|EER47117.1| histidyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 424

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 105/493 (21%), Positives = 194/493 (39%), Gaps = 72/493 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   +   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCSPTETPLWQWVETKVRNVLASYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E         R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIERGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+ ++ A   +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEVFGIPNPEIDAELIILTARLWKALGI---DQHVSLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E+   L + ++ ++     +++L  + +                    
Sbjct: 173 RANYRSALVAFLEQHQSLMSDEEKERLVKNPLRILDTKNQA---------LQEVLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +  +   +L  L+                            + +++  +VRGL
Sbjct: 224 LLDYLDEESREHFAQLCSLLDA-----------------------MGIQYEVNPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +       K    V +  +     +        + LR+    +R  M   S   F
Sbjct: 313 LLVQEVNKDVPVAKA---VDVYIVYSGEGATLNAFQIAETLRSELPTLRV-MTHCSGGKF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q K AD+     A++ G  E +   + IKDL  G E                 QIT+P
Sbjct: 369 QKQFKRADKLEAEFALVIGESEVAEKTVVIKDLLSGTE-----------------QITVP 411

Query: 478 ISELVSTVKKILQ 490
            + LV+ ++K   
Sbjct: 412 QTALVAELQKRFS 424


>gi|17232504|ref|NP_489052.1| histidyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|32130131|sp|Q8YMC2|SYH_ANASP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|17134150|dbj|BAB76711.1| histidyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 462

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 141/490 (28%), Positives = 215/490 (43%), Gaps = 50/490 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+    P GF +    E R+   +LD+IR +YE+YGF PIETP +E  + L    
Sbjct: 1   MAKNDKINFSTPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKG 60

Query: 61  PDEDRPNKGVFSL-----------QDDDG----QWISLRYDLTAPLARYVAENFDTIVFP 105
              D     ++ L           +D  G    +  +L++D T PLA Y+A + + + FP
Sbjct: 61  NQGDNI---IYGLEPILPPNRQAEKDKSGDTGSEARALKFDQTVPLAAYIARHLNDLTFP 117

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
              Y++  VFR E+   GRFRQF QCD+D VG    +   +  M    T     +   D+
Sbjct: 118 FARYQMDVVFRGERAKDGRFRQFRQCDIDVVGREKLSLLYDAQMPAIITEIFEAVNIGDF 177

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I INNRK+L G  + + +       +    +  ID L+K G   VKL L +        
Sbjct: 178 VIRINNRKVLTGFFQSLNISE----TQIKSCISIIDNLEKIGEAKVKLELEKE------- 226

Query: 226 FTKGANLTSEQIDIMVSFLSIDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVR 280
                 +  EQ   ++ F+ ID         +  L + +  +     G +EL  +   VR
Sbjct: 227 -----GINPEQTQKIIDFVKIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVR 281

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
             G    R  I   I RGL YYTG VYE  L              GS+  GGRY+ LV  
Sbjct: 282 NLGVPDKRFCIDLAIARGLNYYTGTVYETTLIG--------HEALGSICSGGRYEELVGT 333

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           F G+ +P  G SIG++RLI  L  L++   N     P  +  ++   + +  Y   +Q L
Sbjct: 334 FIGEKMPGVGISIGLTRLISRL--LKAGILNTLPPTPAQVVVVNMQDELMPTYLKVSQQL 391

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R AG+         +  G Q + AD++     +I G  E +     +KDL  G+++   +
Sbjct: 392 RQAGLNVITNF-EKRQLGKQFQAADKQGIRFCVIIGADEAAAQKSSLKDLQSGEQVEVAL 450

Query: 461 KNNESWREAR 470
            +     + R
Sbjct: 451 ADLAEEIKRR 460


>gi|281492566|ref|YP_003354546.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376230|gb|ADA65721.1| Histidyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 430

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 104/476 (21%), Positives = 182/476 (38%), Gaps = 60/476 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G AD    E      I +  R ++ +Y F  I TP+ E  +   +   +  D 
Sbjct: 1   MKLQKPKGTADLLPAETAKWQYIEEIARGVFNDYNFKEIRTPMFESYELFSRATGETSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++  +D  G+ I+LR + TA   R   EN         P + +   P+FR E+   
Sbjct: 61  VTKEMYDFEDKGGRHIALRPEGTASAVRAYIENKLYAPEVVKPVKLWYDAPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR RQF Q  V+ +G      D E+  M       +GI       +    + +R      
Sbjct: 121 GRLRQFHQFGVECLGVKNPAVDVEIIAMADTLFRQLGITGLKLALNTLGDMESRMAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L       +++L+E        D   +     +++L  +   D +           +   
Sbjct: 181 LIDYLTPFENQLSE--------DSRRRLNENPLRVLDSKEAEDIA---------IVKNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+   +    E+  L++                              I   +VRG
Sbjct: 224 AILDYLNEASKAYFEEVKALLESL-----------------------HIEYTIDPNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I+ F   +         +V GGGRYDGLV  F G   PA GF +GI RL
Sbjct: 261 LDYYNDTIFEFIVDFDGKD--------LTVCGGGRYDGLVEYFDGPATPAFGFGLGIERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++  +  E +    + +  V I  M   ++   +     + LR    + E    S++  G
Sbjct: 313 LMIAQKQEINFIPEETLD-VYIAVMGEKANL--EATKLAESLREQAFKVERDF-SNRKLG 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            Q K A++    L I  G  E   G +++K     K++   +K           +I
Sbjct: 369 AQFKTAEKLGAELIITLGEDEIRTGQIKVKHNQTRKQVETTLKAVHESFAPIFEEI 424


>gi|256823054|ref|YP_003147017.1| histidyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796593|gb|ACV27249.1| histidyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 423

 Score =  246 bits (627), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 98/475 (20%), Positives = 183/475 (38%), Gaps = 71/475 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D          ++   +R +  +YG++ I  P++E +    + + +  D  
Sbjct: 4   KIQAVRGMNDILPDSTPHWQKLESVLRQLMASYGYNEIRMPVVEKTHLFKRSIGEVTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+   GR+R
Sbjct: 64  EKEMYTFEDRNGDSLTLRPEGTASCVRAGIEHGLLYNQEQRLWYMGPMFRHERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDG 177
           QF Q  V+  G S    DAE+ +M A   + +GI                    R  L  
Sbjct: 124 QFHQLGVETFGVSTPDVDAELILMTARLWKMIGIHSSVHLEINSLGSNEARAEYRDKLVA 183

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE I    D+            D   +     +++L  +                 +  
Sbjct: 184 FLEPIKDLLDE------------DSQRRLTTNPLRILDSKNPEVQK---------LVKDA 222

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +   L  + E+    L +++                          +    I++ +VR
Sbjct: 223 PKLNEHLDEESEQHFERLCQILDTN-----------------------NIPYTINTNLVR 259

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +          K    G++  GGRYDGL  +  G + PA+GF++G+ R
Sbjct: 260 GLDYYNRTVFEWVT--------DKLGAQGTICAGGRYDGLTEQLGGHSTPASGFAMGLER 311

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           ++  ++         +E+    +  +     +        + LR     IR  M  G+  
Sbjct: 312 IVALIQE-----MAPEEVATADVYMVALGEHAELSALQLAEQLRDQWPAIRVRMNCGAG- 365

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREA 469
           NF  Q K AD+    +A++ G  E   G + +K L +  ++L    ++     E 
Sbjct: 366 NFKKQFKRADKSGAKIALVIGEQEVQDGTVGVKYLREHKEQLVVSQRDISQLLEQ 420


>gi|148263944|ref|YP_001230650.1| histidyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146397444|gb|ABQ26077.1| histidyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 415

 Score =  246 bits (627), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 88/457 (19%), Positives = 168/457 (36%), Gaps = 56/457 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +     +GF D    E+     I  + R ++E YGF  I  P+LE ++   + + D  D 
Sbjct: 1   MAISGIKGFNDILPGEVEKWQHIEATARRVFELYGFAEIRVPILEKTELFCRSIGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K ++S  D     +++R + TA + R   E+   +     + Y +GP+FR E+   GR
Sbjct: 61  VEKEMYSFTDKGENSVTMRPEGTASVMRAFIEHKLYVADAVAKLYYMGPMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           +RQF Q   +  G +    DA++  M+      +G+         +          + + 
Sbjct: 121 YRQFHQIGAEVTGVTDPKVDAQVLTMLCHFFAELGLDEPSLQINSLGCPDCRPQYRQVLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                +L          D   +F    ++ L  + ++    + T GA         ++  
Sbjct: 181 DFLRSRLEYL-----CDDCKRRFETNPLRAL--DCKSTGCKEATVGA-------PSVLDH 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L            + ++           +                       VRGL+YYT
Sbjct: 227 LCASCNDHFTRTRQHLEAVGTTYSINARM-----------------------VRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                +V  GGRYDGL+S   G  +P  GF++G+ R+ + L 
Sbjct: 264 RTTFELVT--------GLLGSQSAVAAGGRYDGLISDLGGPQLPGIGFAMGVERVALLLA 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             +             +        + +        L+  G   E+     K+  +Q++ 
Sbjct: 316 EKDFRKRP-------DLFIAALGESAQNMAFRLMCGLQKEGAAVEIDY-EGKSLKSQMRR 367

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           AD+ N    +I G  E ++G   +K++ +G +   E+
Sbjct: 368 ADKFNARFTLIIGDDELTKGAAGLKNMDEGSQSDVEL 404


>gi|322515836|ref|ZP_08068780.1| histidine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322125722|gb|EFX97044.1| histidine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 426

 Score =  246 bits (627), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 99/473 (20%), Positives = 177/473 (37%), Gaps = 52/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      + +  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPADSAKWQYVENVARETFKKYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS     D E   M       +GIK  D  + +N+    +  L   
Sbjct: 121 GRLREFHQLGVECFGSKNPATDVETIAMTYQLFNTLGIK--DVTLHLNSLGNTESRL-AY 177

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D L      L   D   +     +++L  + + D          +  E    ++ 
Sbjct: 178 RQALIDYLTPMRESLS-KDSQRRLDENPLRVLDSKEKEDK---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +    E+  ++                          +    I + +VRGL+YY
Sbjct: 228 YLDEESQAYFDEVRTMLDSL-----------------------NIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E +                ++  GGRYD LV  F G      GF +G+ RL++ L
Sbjct: 265 NHTIFEFVTTIDKSE--------LTICAGGRYDSLVEYFGGPETAGFGFGLGLERLLLVL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                     + +  V I  +   ++   K     Q +R  G +AE      +    Q K
Sbjct: 317 DKQGIELPVEESLD-VYIAVLGSGAN--GKALELVQAIRYQGFKAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            AD       I  G  E   G + +K+ A  +E++   +       A + Q+ 
Sbjct: 373 SADTFKAKTVITLGESEVESGQVNVKNNATREEVTVSFEELTKNFAAVLKQLE 425


>gi|77460821|ref|YP_350328.1| histidyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123603394|sp|Q3K7B7|SYH_PSEPF RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|77384824|gb|ABA76337.1| Histidyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 429

 Score =  246 bits (627), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 104/483 (21%), Positives = 193/483 (39%), Gaps = 65/483 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPVWRYFEGTVSRLLDNYGYKQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++ +D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++         DAE+ +M       +GI+       +      +R 
Sbjct: 117 RPQKGRYRQFHQIGLEVFNLDGPDIDAELIIMTWRLWGELGIRDAVKLELNSLGTSESRG 176

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +      DKL+E        D   +     +++L  +       +    A L 
Sbjct: 177 RYREALVEYLSAHHDKLDE--------DSQRRLKTNPLRVLDTK-------NADTQAVLV 221

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 M  +L  +       L   +                               ++ 
Sbjct: 222 D--APKMADYLDDESRAHFKGLKARLDA-----------------------VGIPYVLNP 256

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY+  V+E +          K    G+V  GGRYDGLV +  G+  P  GF++
Sbjct: 257 KLVRGLDYYSKTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQMGGKPTPGVGFAM 308

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFL 411
           GI RL++ L++LE     I     V +     +++         + +R     +R ++  
Sbjct: 309 GIERLVLLLETLEQIPEEISRQVDVYLCAFGEEAEL--AGLALAERVRDQLPNLRLQVNA 366

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREAR 470
           G+  +F +Q K AD+     A+I G  E ++ ++  K L  +G++ S       +     
Sbjct: 367 GAG-SFKSQFKKADKSGALYALILGDDEMAQQVVGFKPLRGQGEQQSIAWDALAAHLATC 425

Query: 471 VAQ 473
           V Q
Sbjct: 426 VVQ 428


>gi|15673949|ref|NP_268124.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|32130145|sp|Q9CE78|SYH_LACLA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|12725009|gb|AAK06065.1|AE006426_11 histidyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326407504|gb|ADZ64575.1| histidyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 430

 Score =  246 bits (627), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 104/476 (21%), Positives = 182/476 (38%), Gaps = 60/476 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G AD    E      I +  R ++ +Y F  I TP+ E  +   +   +  D 
Sbjct: 1   MKLQKPKGTADLLPAETAKWQYIEEIARGVFNDYNFKEIRTPMFESYELFSRATGETSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++  +D  G+ I+LR + TA   R   EN         P + +   P+FR E+   
Sbjct: 61  VTKEMYDFEDKGGRHIALRPEGTASAVRAYIENKLYAPEVVKPVKLWYDAPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGI 178
           GR RQF Q  V+ +G      D E+  M       +GI       +    + +R      
Sbjct: 121 GRLRQFHQFGVECLGVKNPAVDVEIIAMADTLFRQLGITGLKLALNTLGDMESRMAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L       +++L+E        D   +     +++L  +   D +           +   
Sbjct: 181 LIDYLTPFENQLSE--------DSRRRLNENPLRVLDSKEAEDIA---------IVKNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+   +    E+  L++                              I   +VRG
Sbjct: 224 AILDYLNEASKAYFEEVKALLEAL-----------------------HIEYTIDPNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I+ F   +         +V GGGRYDGLV  F G   PA GF +GI RL
Sbjct: 261 LDYYNDTIFEFIVDFDGKD--------LTVCGGGRYDGLVEYFDGPATPAFGFGLGIERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++  +  E +    + +  V I  M   ++   +     + LR    + E    S++  G
Sbjct: 313 LMIAQKQEINFIPEETLD-VYIAVMGEKANL--EATKLAESLREQAFKVERDF-SNRKLG 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            Q K A++    L I  G  E   G +++K     K++   +K           +I
Sbjct: 369 AQFKTAEKLGAELIITLGEDEIRTGQIKVKHNQTRKQVETTLKAVHESFAPIFEEI 424


>gi|295692848|ref|YP_003601458.1| histidyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030954|emb|CBL50433.1| Histidyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 428

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 107/465 (23%), Positives = 181/465 (38%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D    +     ++ ++ RN +    +  I TP  E  +   +   D  + 
Sbjct: 1   MRVQKPKGTVDILPDQSGSWQKVEETARNFFNRANYREIRTPSFENYEIFARSSGDSSEI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   E+         P   + +   FR E+   
Sbjct: 61  VEKQMYDFDDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GSS   +D +  MM  D L  +G+K    HI        R+     
Sbjct: 121 GRQREFHQIGVESFGSSNPLSDVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRQDYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D              +  
Sbjct: 181 LVNYFTPLKDELSE--------DSQRRLRDNPLRILDSKDERDKKF---------LPKAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  D + +   + +++          ++L                       VRG
Sbjct: 224 KIREFLDDDSKANFEAILKMLDQLGIDYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRYD LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGIIFEFMVKDKSLWESAT-----TILGGGRYDHLVEEFNGPATPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+    +    +    +     +    +  K     + LR  G  A+  + + K   
Sbjct: 316 MLVLEKQNPALFEKR---GIDFFITNIGDGTAQKAIEIARSLRNQGFEADFDV-NQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           NQ K ADR      I  G  E + G+L IK LA GK +   +++ 
Sbjct: 372 NQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDL 416


>gi|228470316|ref|ZP_04055220.1| histidyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308059|gb|EEK16934.1| histidyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 459

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 141/512 (27%), Positives = 231/512 (45%), Gaps = 74/512 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKF 59
           M K       +P+G  D   +E+R RN I ++IR+++  YGF+ IETP +E   +L GK+
Sbjct: 1   MNK-----PSIPKGTRDFGAEEMRRRNYIFETIRSVFALYGFEQIETPAIEQLTTLTGKY 55

Query: 60  LPDED-----RPNKGVF-------SLQDDDGQWIS-------LRYDLTAPLARYVAENFD 100
             + D       N G +       +  ++    ++       LRYDLT P ARYV  + +
Sbjct: 56  GVEGDRLLFKILNSGDYKAGIDAETFTEESPAALAARLCERGLRYDLTVPFARYVVMHRN 115

Query: 101 TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
            + FP + Y++ PV+R ++   GR+R+F QCD D +G+ +   + +   M+ +    +  
Sbjct: 116 ELTFPFKRYQMQPVWRADRPQKGRYREFYQCDADVIGTDSLMPEVDFVYMIDEVFRRL-- 173

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
            +    + +NNRKIL GI E I             +   +DKLDK  ++ V   L E   
Sbjct: 174 -KLRTILLLNNRKILAGIAEVIKAPD-----RLAQLTICMDKLDKTSVEAVLADLVESGF 227

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
                    A  + E +  +++    +L+K +  L +L+  +  G KG  EL  + + V 
Sbjct: 228 ---------APESLEPVRKVLTLEGSNLDK-VAVLKQLLADSEIGLKGLEELEYVLDHVD 277

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
            S   +  +  S ++ RGL+YYTG + E          K      GS+ GGGRYD L   
Sbjct: 278 TSDLMT-ELTFSPSLARGLDYYTGAILEV---------KSLDAPMGSISGGGRYDNLTGI 327

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           F  + V   G S G  R+   + SL      ++    ++I     +   L K       L
Sbjct: 328 FGLEGVSGVGISFGAERIYDIMLSLGMFDTAMEPEERIMIVNFGEEE--LQKLLPIAHQL 385

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R AG+  E++  + K    QL YA+ R C   II G+ E + G + IKD+  G +     
Sbjct: 386 RRAGLATEVYPSADK-MKKQLSYANSRGCRHVIIAGSQELNEGKVSIKDMTLGTQ----- 439

Query: 461 KNNESWREARVAQITIPISELVSTVKKILQEN 492
                           P++E+VS +++ L  N
Sbjct: 440 -------------QECPLNEIVSRLRESLSVN 458


>gi|121607083|ref|YP_994890.1| histidyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121551723|gb|ABM55872.1| histidyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 441

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 100/485 (20%), Positives = 181/485 (37%), Gaps = 76/485 (15%)

Query: 2   GKKTKLRAE---LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
            KK     E     RG  D    E      + D +R +   Y +  I TP++E +    +
Sbjct: 5   AKKPSPAPEKLAAVRGMNDILPPESARWEWLEDKVRTLMARYAYRNIRTPIVEPTALFVR 64

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            L    D   K ++S  D   G+ ++LR + TA + R VAE+        R Y +GP+FR
Sbjct: 65  GLGAVTDIVEKEMYSFDDRQSGEPLTLRPEATAGVVRAVAEHSLLYDGGKRLYYMGPMFR 124

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIG 168
           +E+    R+RQF Q   + +G      DAE+ ++       +G            + H  
Sbjct: 125 HERPQRARYRQFHQVGAEALGFPGPELDAELILLAHALWRELGLRAVRLELNSLGEPHER 184

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           + +R  L   L++     D++   RL                +++L  +     +     
Sbjct: 185 LAHRAALSAYLKQHAELLDEQARRRL------------DSNPLRILDTKNPAMQAM---- 228

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
                 E    ++ FL  +    +H +  ++                             
Sbjct: 229 -----VEAAPRLIDFLGRESLAHLHAVQAILDANGVA----------------------- 260

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
             I+  +VRG++YY   V+E +          +    G++ GGGRYD L+ +  G+  PA
Sbjct: 261 WTINPRLVRGMDYYNLTVFEFVT--------DQLGAQGTICGGGRYDYLIGQMGGKPAPA 312

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G+++G+ R++  L +               +  +   +  L       + LR  G+  +
Sbjct: 313 VGWALGMERVLELLDAQ----ATAWPCLVPDVYAVIPCASVLPLALATLERLRQHGLAVQ 368

Query: 409 MFLGSS-----KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK--GKELSREIK 461
           M    +      +   Q K AD      A++ G  ER+RGM+ +K L    G ++   + 
Sbjct: 369 MHAAPAGEQGMGSMKFQFKKADASGARYALVFGEDERARGMVSVKALRDGAGTQVEHALD 428

Query: 462 NNESW 466
               W
Sbjct: 429 TLAQW 433


>gi|325672605|ref|ZP_08152301.1| histidine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325556482|gb|EGD26148.1| histidine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 426

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 100/471 (21%), Positives = 179/471 (38%), Gaps = 68/471 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K        P+G  D    +      + D +       G+  IE P+ E +    + +
Sbjct: 1   MSKSGLSTFSAPKGVPDYVPPQSAEFVAVRDGLTRAARLAGYGHIELPIFEDTGLFARGV 60

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 61  GESTDVVSKEMYTFADRGERSVTLRPEGTAGVMRAVIEHGLDRGQLPVKLSYAGPFFRYE 120

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +      ++G            D      
Sbjct: 121 RPQAGRYRQLQQVGVEAIGVDDPALDAEVIAIADAGFRSLGLDGFRLEITSLGDDTCRPQ 180

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   L  + L  D +    +  LR +D         V+ +  +             
Sbjct: 181 YRERLQEFLFGLDLDEDTRRRAEINPLRVLDDKRPH----VREMTAD------------- 223

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   +M+  LS   +    E+   +                               
Sbjct: 224 ------APLMLDHLSESAKAHFDEVLAHLDAL-----------------------GVPYV 254

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +   G
Sbjct: 255 VNPRMVRGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQPLSGIG 306

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           + +G+ R I+AL +   S  N        +  +   + + ++       LR AGIRA+M 
Sbjct: 307 YGLGVDRTILALAAEGKSAGNPARCE---VFGVPLGAAAKTEMVKIAHALRAAGIRADMV 363

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            G  +     +K ADR    +A++ G  + + G + +KDL+ G++ S  ++
Sbjct: 364 YG-DRGIKGSMKAADRSGARIALVLGDEDLAAGTIAVKDLSNGEQTSVAME 413


>gi|46396578|sp|P60913|SYH_BDEBA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
          Length = 416

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 99/465 (21%), Positives = 175/465 (37%), Gaps = 62/465 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D   ++  +   + +S       YG+  IETP+ E+SD   + L +  D  
Sbjct: 4   KIQRVRGTRDLLPEDSILFRFVEESAYEKALLYGYGEIETPIFEFSDVFHRTLGETSDVV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           NK  +   D  G+ ++LR + TA +AR           P + Y  GP+FR E+   GR+R
Sbjct: 64  NKETYDFTDRGGESLTLRPEGTAGVARAFISEGMMQNLPLKFYYSGPMFRYERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q   + +G  +  AD E   +  D L+ +GI  +     +      +R      L  
Sbjct: 124 QFYQLGAECLGYESPLADVETISLAWDLLKKIGISDDCTLEINTLGDAESRAAYRDTLVN 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        D   +     +++L  +   D   +              + 
Sbjct: 184 YFTAHKDQLSE--------DSKMRLEKNPLRILDSKDEGDKKLNA---------NAPKLE 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L+   +    ++   ++      K  + L                       VRGL+Y
Sbjct: 227 QSLNQTSQDFFKKVIAGIEKLGIPYKINDHL-----------------------VRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E            K    G+V  GGRYDGL+    G   P  G++ GI RL   
Sbjct: 264 YCHTVFEFTTT--------KLGAQGTVLAGGRYDGLIETMGGPKTPGVGWAAGIDRLA-- 313

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
               + +   +     V+I  +  D     +       +R  G + E FL  S   G ++
Sbjct: 314 ----DLTPKELATKKEVIIAVVGADEQGEDESVKVAHEMRVRGFKTENFL--SGKMGKKM 367

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           + A++     A+I G  E +   + +K+   G++        +++
Sbjct: 368 QKANKLGAHYALILGGNEVTNKTVTVKNFTTGEQKEITRAELQTY 412


>gi|328467647|gb|EGF38702.1| histidyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 428

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 108/465 (23%), Positives = 180/465 (38%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D   ++     ++ ++ RN +    +  I TP  E  +   +   D  + 
Sbjct: 1   MRVQKPKGTVDILPEQSGSWQKVEETARNFFNRANYREIRTPSFENYEIFSRSSGDSSEI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   E+         P   + +   FR E+   
Sbjct: 61  VEKQMYDFNDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GSS   AD +  MM  D L  +G+K    HI        RK     
Sbjct: 121 GRQREFHQIGVESFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGDEQVRKGYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        DKL+E        D   +     +++L  +   D                 
Sbjct: 181 LVNYFTPVKDKLSE--------DSQRRLRDNPLRILDSKDDRDKKF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  + + +   + +++          ++L                       VRG
Sbjct: 224 KIRDFLDDNSKANFESILKMLDQLGIDYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRYD LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDKSLWESAT-----TILGGGRYDHLVEEFNGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+        + +   +     +    +  K     + LR  G  A+  + + K   
Sbjct: 316 MLVLEKQN---PELFKNEGIDFFITNIGEGTAQKAIEIARSLRKQGFEADFDV-NQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q K ADR      I  G  E + G+L IK LA GK +   +++ 
Sbjct: 372 GQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDI 416


>gi|284006775|emb|CBA72038.1| histidyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 425

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 108/472 (22%), Positives = 188/472 (39%), Gaps = 63/472 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   +I+   +I + ++ I  +Y F  I TP++E +    + +
Sbjct: 1   MAKN----IQSIRGMNDCLPADIQFWQKIENKLKQILASYSFSEIRTPIVEQTALFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K ++S  D DG  I+LR + TA   R   E+        R + +GP+FR E+
Sbjct: 57  GEVTDVVEKEMYSFDDRDGDSITLRPENTAGCVRAGIEHGLLYNQQQRLWYLGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G +    DAE+ +M A     +GI ++     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGAEVFGLAGPDIDAELIIMTARWWRELGIAKHVSLELNSIGSLAARAK 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L       +DKL+E        D   +     +++L  +    +       A L  
Sbjct: 177 YRQALVTFLQQYEDKLDE--------DCRRRLSTNPLRILDSK--NPDVQKLLNDAPL-- 224

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  D ++    L +L+       +    L                      
Sbjct: 225 -----LADYLDDDSKQHFIGLCKLLDTAGVQYRINQRL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +               G++  GGRYDGLV +  G+   A GF++G
Sbjct: 258 -VRGLDYYNRTVFEWVT--------DALGAQGTICAGGRYDGLVEQLGGKATSAVGFAMG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA--EMFLG 412
           + R+++ ++ +    + + E   V +  +     S     +  + +R   + A   M   
Sbjct: 309 MERMVLLVRQIN--PDFVAECTLVDVYLVACGEASQQAILVLAEKIRDQ-LPALKLMTHH 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              NF  QL  A++    +A+I G  E   G + IKDL  G++     +N  
Sbjct: 366 GGGNFKKQLARANKYQAKIALILGEDEYQSGEVTIKDLRTGEQEKLSQQNIA 417


>gi|298714373|emb|CBJ27430.1| Histidyl-tRNA Synthetase (C-terminal region) Histidyl-tRNA
           Synthetase (N-terminal region) [Ectocarpus siliculosus]
          Length = 576

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 112/465 (24%), Positives = 191/465 (41%), Gaps = 37/465 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            KL  + P+G  D   +++R+RN +    R +  ++GF+  + P+LE      +   +E 
Sbjct: 137 EKLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEE- 195

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              + ++  +D  G+ +SLR ++T  LAR V     ++  P + + I   +R E+   GR
Sbjct: 196 -VTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGR 254

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q ++D  G S   A+AE+   M    E VG++  D  I +N+R +L  +L  +G+
Sbjct: 255 RREHYQWNMDIWGVSGVAAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGV 314

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
            GD    +       +DKLDK  L+ V   L E              L    +  ++  +
Sbjct: 315 PGD----KHTATCVLVDKLDKMPLEAVAGDLAE------------LGLEETSVKRLLEVM 358

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +     +     L K + A      EL  +  L    G  S+ + +  ++VRGL YYTG
Sbjct: 359 ELRDMGGVEAF--LGKESPAA----EELRKLFALAESYGI-SDWLVLDCSVVRGLAYYTG 411

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+EA           +     ++ GGGRYD L+  F G+ +PA GF  G + ++  L  
Sbjct: 412 TVFEAF---------DRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSD 462

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                                D +           LR  GI  ++ L   +      K+A
Sbjct: 463 RGLLPKEAGPGATA--VVFGWDDELQGAATEVAASLRREGISVDLVL-QPRKTKANFKHA 519

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            R      ++    E   G + +KDL    +    +    S   A
Sbjct: 520 TRVGATYVVMVAPSEWEAGKVSVKDLRTSDQKELPVGEVASHILA 564


>gi|116618408|ref|YP_818779.1| histidyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097255|gb|ABJ62406.1| histidyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 433

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 183/468 (39%), Gaps = 55/468 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      + P+G AD   ++      +    R ++ +Y F  I TPL E  +   +  
Sbjct: 1   MAKP---IFQRPKGTADLLPQKTVQWQHVEAVARVLFGDYNFKEIRTPLFENFEVFSRSA 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFR 116
            D  D   K ++   D   + I+LR + TA + R   EN         P + + +GP+FR
Sbjct: 58  GDTSDVVTKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEFDKPYKAFYMGPMFR 117

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY-HIGINNRKIL 175
            E+   GRFRQF Q   +  GS +   DAE+  M+ D  + +G+K        + +++  
Sbjct: 118 YERPQAGRFRQFHQIGAEVFGSDSPALDAEVIAMVIDFFQTLGLKNLKVAINTLGDKESR 177

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           D   + +  +     +E      + D   +     +++L  +   D              
Sbjct: 178 DAYRQALIDYLKPHFDEL-----SADSQARLEKNPLRVLDSKDPRDQVF---------VA 223

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++ FLS    K   +L +++                               I +T+
Sbjct: 224 DAPSILDFLSEKSTKHWEKLQDILTALNLD-----------------------FDIDTTM 260

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   ++E +     +          ++ GGGRY GLV  F G   P  GF IG+
Sbjct: 261 VRGLDYYNDTIFEIMTTDESLKGAA------TIAGGGRYSGLVEEFGGPETPGVGFGIGV 314

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RL+  L++   +    + +   ++   D             Q +R+ G  AE     SK
Sbjct: 315 ERLLDLLQAQNVAPTEEQNLDFYVVNIGDTTDVI---ATKIVQAVRSFGYVAERDY-LSK 370

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +   Q K ADR +    I  G  E    ++ IK++  G++ S ++   
Sbjct: 371 SAKAQFKAADRHHAKYVITIGEQELEEQIVNIKNMTNGEQKSVQLSEL 418


>gi|326790254|ref|YP_004308075.1| histidyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541018|gb|ADZ82877.1| histidyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 421

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 111/461 (24%), Positives = 191/461 (41%), Gaps = 58/461 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +     +G  D   +E+R    +   IRN+ +++GF+ I TP+ E++D   + + +  D 
Sbjct: 1   MELRALKGTKDIYGEEMRKWLDVEQIIRNLCDDFGFNQIRTPMFEFTDLFARGVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGPGR 124
            NK ++S  D     I+L+ + TA + R   E+       P + Y I P FR E+   GR
Sbjct: 61  VNKEMYSFVDKGENRITLKPESTAAVVRAFLEHSMFADTQPTKLYYISPTFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGILE 180
            RQF Q  V+  G+ + TADAE+  +    L+ +GI + + HI        RK  +  L+
Sbjct: 121 QRQFHQFGVEMFGTDSPTADAEVIAIGHTLLKRLGINKVELHINSLGGPECRKKYNESLK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  + L E           ++     +++L  + +     +  KGA    E +   
Sbjct: 181 AFLNTKKEHLCELC--------QERMDKNPLRVL--DCKNPQCQEHLKGAPTVLENL--- 227

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                                   GE+       + +L+           +   IVRGL+
Sbjct: 228 ------------------------GEECRAHFETLQKLLTAM---EIPFVVDPGIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E I               G+V GGGRYD LV    G++VPA GF  G+ RLI+
Sbjct: 261 YYTKTVFEFISND--------IGAQGTVCGGGRYDRLVDEIGGKHVPAVGFGAGMERLII 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
              +  ++           +       +++ +       LR  GI AE      ++   Q
Sbjct: 313 VRDAENNAPL---APAMRDLFIGYRGDEAMMEAFKLVNALRQEGISAESDH-LQRSIKAQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +K+A++ N   + I G  E   G +Q+K++  G  ++  + 
Sbjct: 369 MKFANKINARYSAIIGESELENGEIQLKEMESGDSVTVPMS 409


>gi|330994790|ref|ZP_08318712.1| Histidyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329758051|gb|EGG74573.1| Histidyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 415

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 114/469 (24%), Positives = 197/469 (42%), Gaps = 64/469 (13%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNK 68
           +  RG  D   +E R  N ++++ R I   YGFD   TP+ E +    + L D  D  +K
Sbjct: 2   QPVRGTHDLIGEERRRFNHVVETARRIVSLYGFDEWSTPIFEDTRVFSRSLGDTSDVVSK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++ +D  G+ ++LR + TA + R +  N  T   P + +  GP+FR E+   GR+RQF
Sbjct: 62  EMYTFEDRGGESLTLRPEGTAAICRALVTNGLTQSLPQKVFYAGPMFRYERPQKGRYRQF 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIG 183
            Q   + +G++   ADAE+  M  D L A+GI        +      +R      L    
Sbjct: 122 HQIGAELLGAAEPLADAEIIAMGRDVLGALGIGDEVVLELNTLGDTASRDAWRTALITYF 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D L        + D   +     +++L  + + D +                +  F
Sbjct: 182 SDRRDDL--------SADSQTRLERNPLRILDSKAQQDRA---------LVADAPTIDQF 224

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+                    ++ ++ L    +++          + +  IVRGL+YY 
Sbjct: 225 LT-----------------PEAQEFWDGLRRTLDVM------GVPFRHNPRIVRGLDYYG 261

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +         ++    G+V  GGRYDGLV+   G   PA G++ GI RL + L 
Sbjct: 262 HTAFEFVT--------ERLGAQGTVLAGGRYDGLVAEMGGPATPAIGWAGGIERLSMLLA 313

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
              +            +  +   +D+ +      Q +R AGIRAE       N   +++ 
Sbjct: 314 ESPADPRP--------VAVIPMGADAQAAGLTVLQAIRAAGIRAETSYRG--NMKRRMER 363

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           A+R N   AI+ G+ E +RG++Q+KDL  G++    +     +  A  A
Sbjct: 364 ANRMNATHAIVVGSDEIARGVVQVKDLDSGQQAEVAMDGVADFLRAGSA 412


>gi|78187640|ref|YP_375683.1| histidyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123743606|sp|Q3B1Z1|SYH_PELLD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|78167542|gb|ABB24640.1| histidyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 430

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 95/470 (20%), Positives = 177/470 (37%), Gaps = 59/470 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
           + +  +G  D   +E      + + +  +   YGF  + TP+ EY++   + +    D  
Sbjct: 3   QYQAVKGTRDIFPEEAAQWKHVEEVVHTLASLYGFSEVRTPVFEYTELFQRGIGATTDIV 62

Query: 67  NKGVFSLQ-DDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            K +F+   D  G+ ++LR ++TA + R   + N  +     + Y I  +FR E+   GR
Sbjct: 63  GKEMFTFLPDPGGRSLTLRPEMTAGVMRAALQRNLLSQAPVHKLYYISELFRKERPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILE 180
            RQF Q   + +G S+  A AE+   M    E +G+      I       +R      L 
Sbjct: 123 QRQFSQFGAELLGVSSPAAVAEVLTFMMQVFETLGLSGLRLRINTLGDLEDRARYREALR 182

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 + +L          D+  K  L+   L + + +     D   GA         +
Sbjct: 183 SYFQPYEGEL----------DESSKERLEKNPLRILDSKNPALRDMITGA-------PRL 225

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             F+  +  +    +   +                               +   +VRGL+
Sbjct: 226 FDFVKAEGVREFEAVLRFLAD-----------------------RGIDYDVDHLLVRGLD 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLI 359
           YY    +E         +        ++GGGGRYDGL      G+ +PA GF++G+ RL+
Sbjct: 263 YYCHTAFEV--------QSTALGAQDAIGGGGRYDGLAKELGGGKEMPAVGFAVGMERLL 314

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +A++              V +      S+           LR +GI  E+ L ++++   
Sbjct: 315 IAMEKQGLFATLNPHGPLVYVVV--QQSELADHGMQVAFKLRRSGISTEIDL-AARSMKA 371

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           Q++ A+R     A+  G  E   G   +K+L   ++ + E++        
Sbjct: 372 QMREANRIRSGYALFVGQSELESGQYALKNLVTSEQTTLELQAIIEILRE 421


>gi|257867151|ref|ZP_05646804.1| histidyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257873486|ref|ZP_05653139.1| histidyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257801207|gb|EEV30137.1| histidyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257807650|gb|EEV36472.1| histidyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 432

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 97/477 (20%), Positives = 189/477 (39%), Gaps = 58/477 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + ++ R ++ +Y F+ I TP+ E+ + + + + D  D 
Sbjct: 1   MSYQRPKGTNDILPGESEKWQFVEETARLVFRDYQFNEIRTPIFEHFEVIARSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+AR   EN         P + + +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGERHVTLRPEGTAPIARSYVENKLFGPEHTKPYKVFYMGPMFRYERPQK 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR RQF Q  V+  GS+    D E   M  D    +G+ +    I        R+     
Sbjct: 121 GRLRQFHQIGVEVFGSANPATDVETMAMAMDFYRQLGLSQLRLVINSLGDKETRQNYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L       + +L+E        D   +     +++L  + + D                 
Sbjct: 181 LIDYLAPHEAELSE--------DSKRRLHENPLRVLDSKDKRDQKF---------VADAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ D +     +  ++       +  + +                       VRG
Sbjct: 224 SILDYLTPDAKAHFETVTGMLDALEIPYEIDSNM-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT  ++E       M+E  K     ++  GGRY+ LV    G   P  GF++GI RL
Sbjct: 261 LDYYTHTIFEI------MSEAPKMGAQATICAGGRYNHLVEELGGPETPGFGFALGIERL 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +++ E     + E+       +    ++  +     Q +R  G  A+      +   
Sbjct: 315 LITMEAEEVVIPALNELDA---YVVGLGQETNLEALKVVQAIRNFGFSADRDF-MDRKAK 370

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            Q K AD++   L +  G  E +  ++ IK +A  +E    + +  +  +    ++T
Sbjct: 371 AQFKSADKQGARLVLTLGETELAEQVINIKSMASREEKQFPLADLYARFDEIYDEMT 427


>gi|241895559|ref|ZP_04782855.1| histidyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871137|gb|EER74888.1| histidyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 435

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 184/467 (39%), Gaps = 52/467 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     + P+G AD    E    + + ++ R ++ +Y +  + TP+ E  D   +  
Sbjct: 1   MAKQL---FQKPKGTADLLPNESLKWHYVEETARLLFSDYQYAEVRTPIFENFDIFARSA 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFR 116
            D  D   K ++  +D   + I+LR + TA + R   EN         P + + IGP+FR
Sbjct: 58  GDTSDVVTKEMYDFKDKGDRHIALRPEGTAGVVRAFVENKLFGPEHAKPYKLFYIGPMFR 117

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            E+   GR RQF Q  V+ +GS +   DAE+  M  D  + +GI      +     K   
Sbjct: 118 YERPQAGRMRQFHQIGVEALGSESPALDAEVIAMAVDFFQTLGIANLKVKVNSLGDKESR 177

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
              E       D L      L   D  ++     +++L  +   D               
Sbjct: 178 ---ENYRQALIDFLKPHFEELS-HDSQERLEKNPLRVLDSKDAKDQE---------IVAN 224

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ +LS D ++   ++ + +       +                          T+V
Sbjct: 225 APSILDYLSDDAQQHWLKVQQYLDALGIDYEVDA-----------------------TVV 261

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   ++E +     +          ++ GGGRY+GLVS F G  +   GF IG+ 
Sbjct: 262 RGLDYYNHTIFEVMTKAKALGHGW-----STITGGGRYNGLVSEFGGPEMAGVGFGIGLE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL++ L+S  +   +  ++    I   +   D+        Q +R+ G  A+      + 
Sbjct: 317 RLMLLLESENAPLPDENKLD---IYVANQGQDTDIAAMQMVQAIRSFGYSADRDY-EDRK 372

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              Q K A+R N    I  G  E +     +K++  GKE + ++   
Sbjct: 373 LKAQFKTANRLNARYMITIGERELAEQSANLKNMQTGKETAVKLAEL 419


>gi|317503121|ref|ZP_07961193.1| histidine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315665771|gb|EFV05366.1| histidine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 454

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 142/481 (29%), Positives = 224/481 (46%), Gaps = 61/481 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D   +E+  RN I ++I+++Y  YGF+ IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGPEEMAKRNYIFNTIKDVYALYGFEQIETPAMETLQTLMGKYGEEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F + +          + +                LRYDLT P ARYV  + D +  
Sbjct: 62  -KLLFKILNSGDYLNKISDEELNERNSLHLASKLCEKGLRYDLTVPFARYVVMHRDELQL 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI+   
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTKFGIRI-- 178

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E +     D+ ++ + +  AIDKL+K GL+ V   L  G      
Sbjct: 179 -QIKINNRKILSGIAEVL-----DEADKIIDITVAIDKLEKIGLENVNAELKAG------ 226

Query: 225 DFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  +T E I+ +   L++    E  +  + ++++ +  G KG  E   I + +   
Sbjct: 227 ------GITDEAIEKLQPILTMQGSNEDKLKTIEKVLESSEVGLKGVEETRFILDTLNSV 280

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G N N I++  T+ RGL YYTG ++E          K      GS+ GGGRYD L   F 
Sbjct: 281 GLN-NEIQLDLTLARGLNYYTGAIFEV---------KALDTPMGSITGGGRYDNLTGIFG 330

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +   G S G  R+   L +LE     +     VL           +    +   +R 
Sbjct: 331 MPGLSGVGISFGADRIYDVLNTLELYPKEMLSSTQVLFINFGEKET--AYCLPFIAEIRK 388

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           +GIRAE+F   +K    Q+ YA+ +N P  +  G  E  +G L +KD+  G++     K 
Sbjct: 389 SGIRAEIFPDKAK-MKRQMNYANAKNIPYVVFAGEDEIEKGKLMLKDMQSGEQKLVTAKE 447

Query: 463 N 463
            
Sbjct: 448 L 448


>gi|304414049|ref|ZP_07395417.1| histidyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283263|gb|EFL91659.1| histidyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 426

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 103/476 (21%), Positives = 180/476 (37%), Gaps = 70/476 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+  +  RG  D    E  +   + D ++ +   YG+  I  P++E S    + +
Sbjct: 1   MTKAKKI--QAIRGMHDSLPAETALWQHVEDVVKRVLSRYGYSEIRLPIVEQSQLFKRAI 58

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K ++S  D +G+ ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 59  GEMTDVVEKEMYSFDDRNGESLTLRPEGTAGCIRAGIEHGLLYNQQQRLWYIGPMFRHER 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q   +  G      DAE+ M+ A     +G                    
Sbjct: 119 PQKGRYRQFHQLGAEVFGLFGPDIDAELIMLTARCWRELGIADHVELELNSIGSLQERAR 178

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE      D+            D   +     +++L  +    N       A
Sbjct: 179 YRDALVAFLEIHKNKLDE------------DCQRRMYFNPLRVLDSK--NPNIQQLLHDA 224

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            + SE +D                           EK       +   + ++     + K
Sbjct: 225 PVLSEYLD---------------------------EKSKQHFAGLCAFLDQTN---IKYK 254

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E I               G++  GGRYD LV +  GQ  P  G
Sbjct: 255 VNPRLVRGLDYYNHTVFEWITK--------NLGAQGTICAGGRYDELVEQLGGQATPGIG 306

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA--E 408
           FS+G+ RLI+ ++++     N      + +  +     + S      + LR   I +   
Sbjct: 307 FSMGLERLILLVQAIN---PNFTAAKMIDVYLIASGEGTQSAAMQLAEDLRNK-IPSLKL 362

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           M          Q   A++     A++ G+ E S   + +K+LA G++ + +  +  
Sbjct: 363 MTHHGGGKIARQFSRAEQCGARFALVLGSNELSTRKVTLKNLAIGEQETVQQADIA 418


>gi|282892398|ref|ZP_06300748.1| hypothetical protein pah_c253o017 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497800|gb|EFB40161.1| hypothetical protein pah_c253o017 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 481

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 100/480 (20%), Positives = 184/480 (38%), Gaps = 59/480 (12%)

Query: 7   LRAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           +    P G  D   +          +   +   IR +   YGF+ I TP+ E ++   + 
Sbjct: 1   MDISKPPGVFDILPRGTEETWQLSHLWTYVESVIRKLAAEYGFEEIRTPIFERTELFKRG 60

Query: 60  LPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRN 117
           + +  D  +K +++ +D  G+ +SLR + TAP+ R   E+           + IGP+FR 
Sbjct: 61  VGEATDVVSKEMYTFEDRGGRSMSLRPEGTAPVVRSFVEHNLHTESRTHKLFYIGPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILD 176
           E+   GR+RQ  Q  V+ +G  A   DAE+  ++      +G+     Y   I   +   
Sbjct: 121 ERSQAGRYRQHHQFGVEVIGCDAPEQDAEVIDLLYTLYRRLGLSNLQVYINSIGTPEARI 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
              E +  +  +  +       + D   +F    +++L  +   D               
Sbjct: 181 AYKEALKNYLKEHFDGL-----SEDSKTRFETNPLRILDSKNPGDQK---------IVAS 226

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL          + +L+                          +    ++S +V
Sbjct: 227 APSILDFLDDASRTHFETVKQLLT-----------------------QLNIPFVVNSNLV 263

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          +     SVGGGGRYDGL+    G ++PA GF  GI 
Sbjct: 264 RGLDYYNKTVFEIV--------SGQLGAQNSVGGGGRYDGLIKTIGGPDLPALGFGTGIE 315

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+I  +   E +  N  +     +  +    ++          LR  GI  +M   S K 
Sbjct: 316 RIIQTMLKQEIALPNPYQPA---LFFIPLGKEAEKTCFTLAHDLRQKGISVQMDF-SRKK 371

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            G  ++ A++       + G  E  +  +Q+K++A G+  +  + +     E   +   I
Sbjct: 372 IGKAMQLANQVGARFVAVVGDQELQKREVQLKEMATGETYTAPLFHLNRILEIETSSHDI 431


>gi|227879060|ref|ZP_03996950.1| histidyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256843054|ref|ZP_05548542.1| histidyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256850294|ref|ZP_05555723.1| histidyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262046027|ref|ZP_06018991.1| histidyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381308|ref|ZP_06627311.1| histidyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|227861355|gb|EEJ68984.1| histidyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256614474|gb|EEU19675.1| histidyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256712931|gb|EEU27923.1| histidyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260573986|gb|EEX30542.1| histidyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290922124|gb|EFD99123.1| histidyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 428

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 108/465 (23%), Positives = 181/465 (38%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D    +     ++ ++ RN +    +  I TP  E  +   +   D  + 
Sbjct: 1   MRVQKPKGTVDILPDQSGSWQKVEETARNFFNRANYREIRTPSFENYEIFARSSGDSSEI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   E+         P   + +   FR E+   
Sbjct: 61  VEKQMYDFDDKGGRHIALRPEGTASVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GSS   +D +  MM  D L  +G+K    HI        R+     
Sbjct: 121 GRQREFHQIGVESFGSSNPLSDVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRQDYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D              +  
Sbjct: 181 LVNYFTPLKDELSE--------DSQRRLRDNPLRILDSKDERDKKF---------LPKAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  D + +   + +++          ++L                       VRG
Sbjct: 224 KIREFLDDDSKANFEAILKMLDQLGIDYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRYD LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGIIFEFMVEDKSLWESAT-----TILGGGRYDHLVEEFNGPATPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK    +    +    +     +    +  K     + LR  G  A+  + + K   
Sbjct: 316 MLVLKKQNPALFEKR---GIDFFITNIGDGTAQKAIEIARSLRNQGFEADFDV-NQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           NQ K ADR      I  G  E + G+L IK LA GK +   +++ 
Sbjct: 372 NQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDL 416


>gi|312865842|ref|ZP_07726064.1| histidine--tRNA ligase [Streptococcus downei F0415]
 gi|311098717|gb|EFQ56939.1| histidine--tRNA ligase [Streptococcus downei F0415]
          Length = 426

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 98/471 (20%), Positives = 180/471 (38%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      + +  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPAESAKWQYVENVARETFKKYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSFVENKLFAPEVQKPVKMYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GSS   +D E   M     + +GI+    H+             + 
Sbjct: 121 GRLREFHQIGVECFGSSNPASDVETIAMAYQLFKELGIREVTLHLNSLGNTSSRLAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + + L    + D   +     +++L  + + D          +  E    ++ 
Sbjct: 181 LIDYLTPMKDSL----SKDSQRRLEENPLRVLDSKEKEDQ---------VAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     + ++++                         +    I + +VRGL+YY
Sbjct: 228 YLDEESQAHFEAVRQMLESL-----------------------AIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E +      +         ++  GGRYDGLV  F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFMAKVGDSD--------LTICAGGRYDGLVDYFDGPETPGFGFGLGLERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                 +  ++E     I  +   ++  +K     Q LR  G +AE      +    Q K
Sbjct: 317 DKQGI-SLPVEEGLDAYIAVLGQAAN--AKALELVQALRAQGFKAERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD       I  G  E   G L +K+    +EL   +          + Q
Sbjct: 373 SADAFKAKTLITLGESELESGQLTVKNNQTRQELETSLDTISQDFAGILEQ 423


>gi|238852664|ref|ZP_04643074.1| histidine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834810|gb|EEQ27037.1| histidine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 428

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 111/465 (23%), Positives = 184/465 (39%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E     ++    RN ++   +  I TP  E  +   +   +  D 
Sbjct: 1   MKVQRPKGTVDILPAESGSWEKVETIARNFFKRANYREIRTPSFENYEVFSRSSGESSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   EN         P   Y I   FR E+   
Sbjct: 61  VEKEMYDFNDKGGRHIALRPEGTAGVVRAYVENKLYGPGVVKPFNVYYIDNTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS++  AD E  MM  D L  +G+K  + HI        RK     
Sbjct: 121 GRQREFHQIGVESFGSNSPLADVETIMMGHDLLAELGVKNYELHINTLGNAQVRKDYRDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+++E        D   +  +  +++L  +   D                 
Sbjct: 181 LVNYFTPLKDQISE--------DSQRRLSMNPLRILDSKAEEDKQF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +V +L  D +K+   + ++++         ++L                       VRG
Sbjct: 224 RIVDYLDEDSKKNFETITDMLEQLGINYVLDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDKNLWESAI-----TILGGGRYNHLVEEFDGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK    +    +    +     +    +  K     + LR  G +A+  +   K   
Sbjct: 316 MLVLKEQNPALFEDE---GIDFFITNIGEGTEMKTVEIARSLRKQGFKAQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q + ADR +    I  G  E   G+L IK LA GK L   +++ 
Sbjct: 372 QQFRKADRVHAKFVITLGAKELENGVLNIKRLADGKTLDLSLEDL 416


>gi|300856530|ref|YP_003781514.1| histidyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436645|gb|ADK16412.1| histidyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 416

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 99/464 (21%), Positives = 188/464 (40%), Gaps = 62/464 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E    + + D  +NI  +YG+  I TP+ EY++   + + +  D 
Sbjct: 1   MAIQAPKGTKDILPTESYKWHYLEDKFKNIAASYGYREIRTPVFEYTELFERGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ QD  G+ ++L+ + T+P  R   E+       P + +   PV R E    GR
Sbjct: 61  VQKEMYTFQDKAGRSLTLKAEGTSPAVRAFVESSLYNEVQPTKLFYFTPVLRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            R+  Q  ++  G+   + DAE+  +     + +G+K      +       RK  +  L+
Sbjct: 121 LREHHQFGIEAFGAENASLDAEVISLAMRVYKELGVKGIELNINSIGCATCRKKYNEALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K      D L +            +F    +++L  + + ++  +  K A L       M
Sbjct: 181 KFLKENYDALCDTC--------KSRFSKNPMRIL--DCKVESCKEIVKDAPL-------M 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L  D ++    L + +                          +   KI+  IVRGL+
Sbjct: 224 IDYLCDDCKEHFESLQKYLSA-----------------------VNIEFKINPLIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E I                ++ GGGRYD L+    G  +PA GF +GI R ++
Sbjct: 261 YYTKTVFEIINND------------ITICGGGRYDYLIEEVGGPKMPAVGFGMGIERTLL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+    +   I     + +       D+  K       LR   +R E    ++++   +
Sbjct: 309 TLEE---NKIEIPNRPYIDLYVGAMGDDAKLKALNLVNQLREKNVRCECDH-TNRSVKAE 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           +KYA++      +I G  E   G+ + K +  G +   +++  +
Sbjct: 365 MKYANKIGARFTVILGDNELECGIAKFKRMEDGNQFEIKLEELD 408


>gi|163793921|ref|ZP_02187895.1| Histidyl-tRNA synthetase, class IIa [alpha proteobacterium BAL199]
 gi|159181032|gb|EDP65549.1| Histidyl-tRNA synthetase, class IIa [alpha proteobacterium BAL199]
          Length = 414

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 107/471 (22%), Positives = 182/471 (38%), Gaps = 69/471 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   +E R    I+++  ++   YGF  IETP+ E+++   + L
Sbjct: 1   MAK-----LQPVRGTHDLLPEEARRHRHIVETGLSVSGRYGFGEIETPIFEFTEVFERPL 55

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D  G+ ++LR + TA + R +     T   P + Y  GP+FR E+
Sbjct: 56  GEATDVVTKEMYTFTDRGGEQLTLRPEGTASVCRALISGGLTQSLPAKFYYQGPMFRYER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG-----IKRNDYHIGINNRKI 174
              GR RQF Q  ++ +G++   AD E+    AD L+A+G         +      +R+ 
Sbjct: 116 PQKGRMRQFHQIGIELLGAAEPQADIEVIACGADILDAIGVLDRTTLELNTLGDTESRRA 175

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
             G L +      D L+E        D L +  +  +++L  +   D             
Sbjct: 176 YRGALVEYFSAYRDALSE--------DSLRRLEVNPLRILDSKDEGDR---------RLI 218

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +        L+   +     + + +                            R   +  
Sbjct: 219 KDAPSFDDHLNAASKDFFGAVTQGLDAL-----------------------GVRFVRNPH 255

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRG +YY    +E +               G+V  GGRYDGLV    G  +P  G++ G
Sbjct: 256 LVRGFDYYCHTAFEFVT--------DALGAQGTVMAGGRYDGLVETLGGPAIPGVGWAAG 307

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I RL +  +                I  +    +  ++    +  LR AG   E      
Sbjct: 308 IERLSLLAE--------GIAEPVRPIAIVPVGPNGEAEALKLSHRLRRAGFTIEHGYTG- 358

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            N G +LK A +     A+I G  E +RGM+Q++DL  G +    +   E 
Sbjct: 359 -NLGKRLKRATKLGARAAVILGEDELARGMVQLRDLDAGAQDEAPLDRIEE 408


>gi|170078871|ref|YP_001735509.1| histidyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|229558736|sp|B1XJ88|SYH_SYNP2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|169886540|gb|ACB00254.1| histidyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 426

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 101/471 (21%), Positives = 178/471 (37%), Gaps = 64/471 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    EI    ++   +R+      +  I TP+ E +    + + +  D  
Sbjct: 3   TIQALRGTKDIFAPEIAYWQQVEAVVRDCLGRAMYQEIRTPIFEQTSLFERGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K ++S  D   + I+LR + TA   R   E          R +  GP+FR E+   GR 
Sbjct: 63  SKEMYSFTDRGDRPITLRPEGTAGAVRAYIERKLFAQGGVQRLWYTGPMFRYERPQAGRQ 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKILDGILEK 181
           RQF Q  V+ +GS+   AD E+  +  + L+ +G+K      +      +R+     L  
Sbjct: 123 RQFHQVGVEVLGSADPRADVEVMAIATEILQKLGLKNLSLQLNSVGNGGDRQRYREALVD 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                   L+         D  ++     +++L  + +              ++    ++
Sbjct: 183 YLTPFKADLDA--------DSQERLERNPLRILDSKDQKTQE---------IAQNAPSIL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  D +K   ++   +                               ++  +VRGL+Y
Sbjct: 226 DYLGDDSKKHFDQVQSSLTALGID-----------------------YVLNPCLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E         +        +V GGGRYDGLV+   G   PA G++IG+ RL++ 
Sbjct: 263 YTHTAFEI--------QSSDLGAQATVCGGGRYDGLVAELGGPETPAVGWAIGLERLVIL 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+ L            +    +     + +   +    LR AG   E+ L S   FG Q 
Sbjct: 315 LQQLGE-----ASGPQLDFYLVSKGEQAEAAAVILAHKLRFAGFSVELDL-SGSAFGKQF 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN----NESWRE 468
           K ADR      ++ G  E     +Q+K L    + +    +     ESWR+
Sbjct: 369 KRADRSGAIACLVLGDEEAVNQQVQLKWLQTKAQETLAQADLLGNLESWRQ 419


>gi|213401257|ref|XP_002171401.1| histidyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|211999448|gb|EEB05108.1| histidyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 538

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 125/520 (24%), Positives = 222/520 (42%), Gaps = 67/520 (12%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K T+   + P+G  D   K++ +R +I  ++ +I++ +G   ++TP+ E  + L     
Sbjct: 55  KKGTQFTLKTPKGTRDWAEKDVALREKIFGTVTDIFKRHGGVTLDTPVFELKEILTGKYG 114

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH- 120
           ++   +K ++ L+D  G+  SLRYDLT P AR++A N    +   + + I  V+R ++  
Sbjct: 115 ED---SKLIYDLKDQGGELCSLRYDLTVPFARWLAMNPK--ITSIKRFHIAKVYRRDQPA 169

Query: 121 -GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
              GR R+F QCD D      +  AD+E   ++ + L+A+ +    Y I +N+RKILDGI
Sbjct: 170 MTKGRMREFYQCDFDIAGTFDSMVADSEALKILVEALDALNV--GKYTIKLNHRKILDGI 227

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E  G+  D    +   +  A+DKLDK   + VK  + E              L  E  D
Sbjct: 228 FEVCGVPSD----KIRTISSAVDKLDKMPWENVKEEMTEE-----------KGLPEEVAD 272

Query: 239 IMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            +  ++ +     +       E +    +    F ++ ++ E +   G   +R     ++
Sbjct: 273 RIGEYVLLKGGPELLAKLKADEKLSANKSASGAFEDMKLLFEYMENFGIL-DRFSFDMSL 331

Query: 296 VRGLEYYTGCVYEAILGF------------------PVMNEKQKPVVFGSVGGGGRYDG- 336
            RGL+YYTG ++EA+                              +  GS+  GGRYD  
Sbjct: 332 ARGLDYYTGIIFEAVTEASAPKKIASKKDVKKSDDPEADRSNDDTIGVGSIAAGGRYDNL 391

Query: 337 --LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD---SLS 391
             + S  K   +P  G S+G+ R+   L++             V +       +    L 
Sbjct: 392 VGMFSSRKNAQLPCVGISLGLERIFSILRNRIPDDELRANEVEVYVMAFGGGKEWTGFLK 451

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
           +       L  AGI+AE           Q + AD+   P+A+I G  E + G ++IK + 
Sbjct: 452 ERMNVCSELWAAGIKAEFLYKVKAKPRQQFEAADKYGVPVAVILGQDEFNGGNVRIKRMG 511

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           + +                   + +P + +VS +KK+L  
Sbjct: 512 QKE--------------NSDEGVLVPRASMVSELKKLLAS 537


>gi|161507424|ref|YP_001577378.1| histidyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048276|sp|A8YUZ9|SYH_LACH4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|160348413|gb|ABX27087.1| Histidyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 428

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 107/465 (23%), Positives = 180/465 (38%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D   ++     ++ ++ RN +    +  I TP  E  +   +   D  + 
Sbjct: 1   MRVQKPKGTVDILPEQSGSWQKVEETARNFFNRANYREIRTPSFENYEIFSRSSGDSSEI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   E+         P   + +   FR E+   
Sbjct: 61  VEKQMYDFNDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GSS   AD +  MM  D L  +G+K    HI        RK     
Sbjct: 121 GRQREFHQIGVESFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRKGYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D                 
Sbjct: 181 LVNYFTPVKDELSE--------DSQRRLRDNPLRILDSKDDRDKKF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  + + +   + +++          ++L                       VRG
Sbjct: 224 KIRDFLDDNSKANFESILKMLDQLGIDYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRYD LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDKSLWESAT-----TILGGGRYDHLVEEFNGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+        + +   +     +    +  K     + LR  G  A+  + + K   
Sbjct: 316 MLVLEKQN---PELFKNEGIDFFITNIGEGTAQKAIEIARSLRKQGFEADFDV-NQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q K ADR      I  G  E + G+L IK LA GK +   +++ 
Sbjct: 372 GQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDI 416


>gi|325568592|ref|ZP_08144885.1| histidine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325157630|gb|EGC69786.1| histidine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 449

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 97/477 (20%), Positives = 189/477 (39%), Gaps = 58/477 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E      + ++ R ++ +Y F+ I TP+ E+ + + + + D  D 
Sbjct: 18  MSYQRPKGTNDILPGESEKWQFVEETARLVFRDYQFNEIRTPIFEHFEVIARSVGDTTDI 77

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + ++LR + TAP+AR   EN         P + + +GP+FR E+   
Sbjct: 78  VSKEMYDFYDKGERHVTLRPEGTAPIARSYVENKLFGPEHTKPYKVFYMGPMFRYERPQK 137

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR RQF Q  V+  GS+    D E   M  D    +G+ +    I        R+     
Sbjct: 138 GRLRQFHQIGVEVFGSANPATDVETMAMAMDFYRQLGLSQLRLVINSLGDKETRQNYRQA 197

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L       + +L+E        D   +     +++L  + + D                 
Sbjct: 198 LIDYLAPHEAELSE--------DSKRRLHENPLRVLDSKDKRDQKF---------VADAP 240

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ D +     +  ++                              ++ S +VRG
Sbjct: 241 SILDYLTPDAKAHFETVTSMLDALE-----------------------IPYEVDSNMVRG 277

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT  ++E +   P M          ++  GGRY+ LV    G   P  GF++GI RL
Sbjct: 278 LDYYTHTIFEIMSDAPKM------GAQATICAGGRYNHLVEELGGPETPGFGFALGIERL 331

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +++ E     + E+       +    ++  +     Q +R  G  A+      +   
Sbjct: 332 LITMEAEEVVIPALNELDA---YVVGLGQETNLEALKVVQAIRNFGFSADRDF-MDRKAK 387

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            Q K AD++   L +  G  E +  ++ IK +A  +E    + +  +  +    ++T
Sbjct: 388 AQFKSADKQGARLVLTLGETELAEQVINIKSMASREEKQFPLADLYARFDEIYDEMT 444


>gi|157363624|ref|YP_001470391.1| histidyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166980050|sp|A8F593|SYH_THELT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|157314228|gb|ABV33327.1| histidyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 433

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 102/457 (22%), Positives = 186/457 (40%), Gaps = 52/457 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           +R E  +G  D   ++I     +      +   +G+  I TP+ E ++   + +  + D 
Sbjct: 1   MRYERVKGTVDIFGQDIPYWYFVEQRAIQVALLFGYKEIRTPVFEQTELFARSVGQETDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+LR + TAP  R   EN    +  P R Y +GP+FR E+   GR
Sbjct: 61  VQKEMYTFTDKGGRSITLRPEGTAPTIRAFLENSMINLGLPQRFYYLGPMFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q  ++ +GS+   AD E   +    L+++ +K+   +I     +      ++   
Sbjct: 121 LRQFHQFGIELIGSADPAADVETIQLAKMFLDSLELKKYKIYINSIGCQECRRAYKEALR 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +   + +      D   +F    ++LL  +   +            ++Q   +  +L
Sbjct: 181 SYYEHHYDHI----CDDCKRRFETNIMRLLDCKVDIN-----------VAKQAPKISDYL 225

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                     + +++                                 S++VRGL+YYT 
Sbjct: 226 CDHCRDHYESIKQMLTDL-----------------------RVYFHEDSSLVRGLDYYTR 262

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E         + +      ++  GGRYDGL     G ++P+ GF+ GI RLI+A+K+
Sbjct: 263 TVFEI--------KHESLGAQSTILAGGRYDGLCKELGGHDIPSLGFASGIERLILAVKA 314

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E     I +     +        +  K     Q LR   I   +   +S++   QLK+A
Sbjct: 315 EEI---EIPKPPYCDVYIASIGKQARVKAFQIAQGLRLCKIPV-ISDVNSRSLKAQLKHA 370

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           D+    LAII G  E ++  +Q+K+L    +   E  
Sbjct: 371 DKLGAILAIIIGENELAQSTVQVKNLLTETQSEVEFD 407


>gi|257387357|ref|YP_003177130.1| histidyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169664|gb|ACV47423.1| histidyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 436

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 112/451 (24%), Positives = 189/451 (41%), Gaps = 37/451 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF D    E+    +++D I      YGF  I TP LE ++       +E    + ++ 
Sbjct: 6   KGFRDVYPAEMAAYRQVIDEIETTARQYGFREITTPALEATEMYVDKSGEEIV--EELYH 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +D  G+ ++L  +LT  +AR V      +  P +     P +R E+   GRFR+F Q +
Sbjct: 64  FEDKGGRDVALTPELTPTVARMVVAKQQELSKPIKWVSTRPFWRYEQVQQGRFREFHQTN 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +D  GSS  TADAE+  +  D L  +G+  +D+   +++R IL G+LE      D +   
Sbjct: 124 IDIFGSSEPTADAEILAVATDMLTGLGLSADDFDFRVSHRDILTGLLESFEADVDTQDAI 183

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R++  RA                 +   D   +    A L+ +Q +    +L    +  +
Sbjct: 184 RVVDKRA-----------------KIDRDEYVEGLTDAGLSLDQAEQFDEWLRA-GDDDL 225

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             L E + G+         L  +       G       IS T  RG +YYTG V+E    
Sbjct: 226 DALAE-MSGSEQVADAVANLEAVLAAAEDFGVRE-YCTISLTTARGFDYYTGVVFECFDS 283

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI--VALKSLESSTN 370
              ++         +V GGGRYD L+  F G+  PA GF+ G+      + L+       
Sbjct: 284 TGEVS--------RAVFGGGRYDDLIEGFGGEPTPAVGFAPGVMNSTLPLLLQRAGVWPE 335

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                   ++       D+        + LR +G   E  + S ++FG Q+ YAD  N  
Sbjct: 336 EAVSTDYYVLQV----GDTRPVAARIARELRESGHVVEADV-SDRSFGAQMGYADSINAE 390

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +I G  +     + +KD+A G++ +  + 
Sbjct: 391 TVVIVGENDLENDEVTVKDMASGEQTTAPVD 421


>gi|227503528|ref|ZP_03933577.1| histidyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227075564|gb|EEI13527.1| histidyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 429

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 98/476 (20%), Positives = 182/476 (38%), Gaps = 68/476 (14%)

Query: 1   MGKKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M ++ + +A   P+G  D    E     ++  ++       GF  IE P+ E +    + 
Sbjct: 3   MSEEKRFQALSAPKGVPDYYPPESATFYKVRQTMVEQAHLSGFQHIELPIFEDTALFARG 62

Query: 60  LPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRN 117
           + +  D  +K +++  D   + ++LR + TA + R V ++       P +    GP FR 
Sbjct: 63  VGESTDVVSKEMYTFADRGERSVTLRPEGTAGVMRSVIQHNLDRGQLPVKLNYSGPFFRY 122

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGI 169
           E+   GR+RQ  Q  V+ +G      DAE+  +   +  A+G            D +   
Sbjct: 123 ERPQAGRYRQLQQVGVEAIGVDDPALDAEVIALADRSYRALGLSGFRLELTSLGDRNCRP 182

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L K+ L  + +    +  LR +D       + +                  
Sbjct: 183 AYREKLQEFLFKLDLDEETRRRAEINPLRVLDDKRPEMQEQLAD---------------- 226

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                    +M+ +L+ +  +    +  ++                              
Sbjct: 227 -------APLMLDYLNAECREHFETVTGMLDD-----------------------MGVAY 256

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   
Sbjct: 257 EINPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLSGI 308

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G+ +G+ R I+AL++   +         V    +   +            LR AGI A+M
Sbjct: 309 GYGLGVDRAILALEAEGITLEGSDSRVDVYGIALGTAAKRRMTG--IINDLRKAGIAADM 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             G  +     +K ADR     A++ G  E   G + +KDLA  ++   E+    +
Sbjct: 367 SFG-DRGLKGAMKGADRAGARFALVLGDQELENGTVAVKDLAAHEQRDIELSQLVA 421


>gi|38233946|ref|NP_939713.1| histidyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|46396579|sp|P60914|SYH_CORDI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|38200207|emb|CAE49888.1| histidyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 423

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 103/499 (20%), Positives = 186/499 (37%), Gaps = 86/499 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK     + P+G  D           + D+  +     G++ IE P+ E +    + +
Sbjct: 1   MSKKKLQTIQAPKGVPDYIPPVSPEFLGVRDTFAHQAHLAGYEHIELPIFEDTTLFARGV 60

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D   K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 61  GESTDVVTKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLNYYGPFFRYE 120

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +   +L+ +G            D+     
Sbjct: 121 RPQAGRYRQLQQVGVEAIGVDDPALDAEVIALADRSLKVIGLTGYRLELTSLGDHTCRPQ 180

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   L K+ L  + +    +  LR +D                       + T  A
Sbjct: 181 YREKLQEFLFKLPLDEETRHRAEINPLRVLDDK----------------RPEIQEMTVDA 224

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L       M+  LS    +    +  ++                               
Sbjct: 225 PL-------MLDNLSDSSREHFELVTGMLDDLNVA-----------------------YV 254

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +   G
Sbjct: 255 VNPRMVRGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQELSGIG 306

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           +++G+ R ++AL++ +    +      V +  +   S +  +       LR+AGI A+M 
Sbjct: 307 YALGVDRCLLALEAEQKRVTDGSR---VNVFGVAMGSAAKREMVRIIDALRSAGISADMA 363

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            G  +     +K ADR     A++ G  E     + +KDLA                  +
Sbjct: 364 YG-DRGLKGAMKGADRAGARFALVLGDRELENNCVAVKDLA------------------Q 404

Query: 471 VAQITIPISELVSTVKKIL 489
             Q  + +  L+  ++  L
Sbjct: 405 QGQRDVSLDNLILEIQSAL 423


>gi|78066581|ref|YP_369350.1| histidyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123742580|sp|Q39FR0|SYH_BURS3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|77967326|gb|ABB08706.1| histidyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 446

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 101/502 (20%), Positives = 198/502 (39%), Gaps = 66/502 (13%)

Query: 1   MGKKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M ++ +   +L   +G  D   ++  +      +++++   YG+  I TP++E++    +
Sbjct: 1   MTEQKRKIEKLTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR
Sbjct: 61  GIGEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         
Sbjct: 121 HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEER 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +                ++ 
Sbjct: 181 AAHRVELIKYLEQFADVLD----EDAKRRLYTNPLRVLDTKN---------PALQEIAQN 227

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL  +       L  L+                          +   KI+  +V
Sbjct: 228 APKLIDFLGDESRAHFEGLQRLLLAN-----------------------NIPFKINPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI 
Sbjct: 265 RGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GS 413
           R++  LK  + +     E   V +  +     +  +  +  + LR  G+         G+
Sbjct: 317 RILELLKEDDLAP----EQEGVDVYVVHQGETAREQAFIAAERLRDTGLDVIFHCSADGA 372

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             +F +Q+K AD      A+I G  E + G + +K L                   +  Q
Sbjct: 373 PASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALR-----------GAGGDGEKNVQ 421

Query: 474 ITIPISELVSTVKKILQENKEE 495
            T+P+  L   +   +  + E+
Sbjct: 422 QTVPVEGLTEFLINAMVASAED 443


>gi|134295842|ref|YP_001119577.1| histidyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166227953|sp|A4JEN9|SYH_BURVG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|134138999|gb|ABO54742.1| histidyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 446

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 100/502 (19%), Positives = 196/502 (39%), Gaps = 66/502 (13%)

Query: 1   MGKKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M ++ +   +L   +G  D   ++  +      +++++   YG+  I TP++E++    +
Sbjct: 1   MTEQKRKIEKLAGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTQLFTR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR
Sbjct: 61  GIGEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q  V+ +G +   ADAE+ MM     + +G+      I         
Sbjct: 121 HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEER 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +                ++ 
Sbjct: 181 AAHRVELIKYLEQHVDVLD----EDAKRRLYTNPLRVLDTKN---------PALQEIAQN 227

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL  +       L  L+                          +   KI+  +V
Sbjct: 228 APKLIDFLGDESRAHFEGLQRLLLAN-----------------------NIPFKINPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          K    G+V  GGRYD L+ +  G+   A G+++GI 
Sbjct: 265 RGLDYYNLTVFEWVT--------DKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK- 415
           R++  LK  + +     E   V +  +     +  +  +  + LR  G+       +   
Sbjct: 317 RILELLKEEDLAP----EQEGVDVYVVHQGEAAREQAFIAAERLRDTGLDVIFHCSADGA 372

Query: 416 --NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             +F +Q+K AD      A+I G  E + G   +K L                   +  Q
Sbjct: 373 PASFKSQMKRADASGAAFAVIFGEEEVANGTAGVKALR-----------GAGQEGEKNVQ 421

Query: 474 ITIPISELVSTVKKILQENKEE 495
            T+P+  L   +   +  + E+
Sbjct: 422 QTVPVEGLTEFLINAMVASAED 443


>gi|251781086|ref|ZP_04824006.1| histidine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243085401|gb|EES51291.1| histidine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 417

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 97/465 (20%), Positives = 181/465 (38%), Gaps = 56/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D   ++    + + ++ R++ + YG   I TP+ E+++   + + D  D 
Sbjct: 3   MEMQAPKGTKDMLPQDAYKWHYVENTFRDVVKAYGIREIRTPMFEHTELFLRGVGDTTDI 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + ++L+ + TAP  R   EN       P + + I P FR E    GR
Sbjct: 63  VQKEMYTFNDKGNRSVTLKPEGTAPAVRAFIENRLFNEAQPTKLFYITPTFRYENVQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG-ILEKIG 183
            RQF QC ++  GS   T D E   +  DTL  +G+K    HI             E + 
Sbjct: 123 LRQFHQCGIEIFGSKEPTMDVEAIKVAMDTLSKLGLKSLSLHINNLGCPTCRAKYNEALK 182

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              ++   +            +F    +++L  + R  +           ++    ++ +
Sbjct: 183 KFLEENYEDLCDTC-----KSRFEKNPMRILDCKERKCHE---------ITKNAPQILDY 228

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  + E   +++ E +                               +   IVRGL+YYT
Sbjct: 229 VCEECETHFNKVKEYLDILE-----------------------IPYIVDQGIVRGLDYYT 265

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             ++E I                +V GGGRYD LV    G  +PA GF+IG  R+I+ L+
Sbjct: 266 KTIFEIINDD------------FTVCGGGRYDKLVEELGGPEMPAVGFAIGEERIIMTLE 313

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +       I     V +                   LR+ G++ E+     ++   ++KY
Sbjct: 314 NEGI---EIPNENMVDLYIGARGDAEKKYAFKLAHDLRSLGVKCEINH-MGRSIKAEMKY 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           A++       I G  E     + +K +  G+  +  + N E  ++
Sbjct: 370 ANKIGSKFTTILGEDELENNRINLKRMEDGEIFTLSLDNIEEIQK 414


>gi|124003830|ref|ZP_01688678.1| histidyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123990885|gb|EAY30352.1| histidyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 467

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 137/496 (27%), Positives = 225/496 (45%), Gaps = 60/496 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  LP+G  D   + +  RN ILD+I++ ++ +GF P+ETP +E    L GK+  + D  
Sbjct: 5   KPSLPKGTRDFGPEVMAKRNYILDTIKSTFQKFGFAPLETPSIEKLSVLTGKYGDEGDQL 64

Query: 65  ---RPNKGVF------SLQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFPCRT 108
                N G +         D+  + ++       LRYDLT P AR+V  + D + FP + 
Sbjct: 65  IFKILNSGDYLGKVTQDDIDEGAKHLTPKIADKALRYDLTVPFARFVVMHRDKLAFPFKR 124

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y+I PV+R ++   GR+R+F QCD D VG+ +   +AE+ +M+ + L  +G   +D+ + 
Sbjct: 125 YQIQPVWRGDRPQKGRYREFYQCDADVVGTDSLICEAEIIIMINEVLPKLG--IDDFSLK 182

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           INNRK+L GI + IG            +  AIDKLDK G   V   L             
Sbjct: 183 INNRKVLTGIAQVIG-----HEERIGDICVAIDKLDKIGKDKVIEELA------------ 225

Query: 229 GANLTSEQIDIMVSFLSIDLE--KSMHELYELVKG-TIAGEKGFNELVVISELVRKSGYN 285
              +    I+ +  F  I     + + +L  +      AG +G +E+  +   ++    +
Sbjct: 226 TRGIDGAAIEKLHPFFDIKGSITEKIAKLRAIFADKAPAGLQGLDEVEQVLNYIKTMTQS 285

Query: 286 SNR-----IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           +       +    T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   
Sbjct: 286 AEPEKDFSLDFDITLARGLSYYTGAIFEV---------KVNNVQIGSISGGGRYDDLTGT 336

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           F    V   GFS G+ R+   +  L     N      V +   + D  + +    +    
Sbjct: 337 FGLSGVSGVGFSFGVDRIYDVMDELNLFPAN--THASVQVMFTNFDPKAEAYTLPFLPRF 394

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R  GI  E+F  ++K    Q KYA+R++ P  +I G  E   G L +K++  G++ +  +
Sbjct: 395 RNRGISCEIFPDAAK-LNKQFKYANRKSIPYVVIVGEEEMKSGKLTLKNMDSGEQEALTV 453

Query: 461 KNNESWREARVAQITI 476
                  + +  Q  +
Sbjct: 454 DEIIE--KLKPIQKVV 467


>gi|119897219|ref|YP_932432.1| histidyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|254782319|sp|A1K3Z0|SYH_AZOSB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|119669632|emb|CAL93545.1| Histidine--tRNA ligase [Azoarcus sp. BH72]
          Length = 433

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 104/496 (20%), Positives = 185/496 (37%), Gaps = 78/496 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    E        D +R+  ++YG+ PI  PL+E +    + + +  D  
Sbjct: 4   TLQAVRGMNDILPDEAETWEHFEDIVRDWLKSYGYRPIRMPLVEPTPLFKRAIGEVTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
            K ++S +D  +G+ ++LR + TA   R   ++       P R Y  GP+FR+E+   GR
Sbjct: 64  EKEMYSFEDALNGEHLTLRPEGTASCVRAAIQHNLVAGHGPQRLYYHGPMFRHERPQKGR 123

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILE 180
           +RQF Q  V+ +G +    DAE  +M A   + +G++     I        R      L 
Sbjct: 124 YRQFHQIGVEALGFAGPDIDAEHIIMCARLWDDLGLEDVSLEINSLGAAEERAQHRAALI 183

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  DKL+E        D   +     +++L  +                 E    +
Sbjct: 184 AYLEQHRDKLDE--------DGQRRLYTNPLRILDTKN---------PDLQPVVEAAPRL 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             +L  +       +   +K                             +I+  +VRGL+
Sbjct: 227 ADYLGDESRAHFDAVQLFLKDA-----------------------GIPYRINHRLVRGLD 263

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E +          +    G+V  GGRYDGLV++  G+  PA GF++G+ RL+ 
Sbjct: 264 YYNRTVFEWVTT--------RLGAQGTVCAGGRYDGLVAQLGGKPQPAAGFAMGVERLLA 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
             +                +  +     +        + LR  G  A +  G   +F +Q
Sbjct: 316 LWQESGGEPERQAP----DVYVVHLGEAAQRLAFQAAEALRGHGFSAVLHCGGG-SFKSQ 370

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           +K AD     +A++ G  E + G + +K L                      Q  + ++ 
Sbjct: 371 MKKADGSGASIAVVIGEDEAAAGEVGVKPLR-----------------GPGGQQRVTLAA 413

Query: 481 LVSTVKKIL-QENKEE 495
           L   V  +L  +  ++
Sbjct: 414 LAEAVGGVLYSDQGDD 429


>gi|254425393|ref|ZP_05039111.1| histidyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196192882|gb|EDX87846.1| histidyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 431

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 106/467 (22%), Positives = 175/467 (37%), Gaps = 59/467 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    E  +   I    R +     +  I TP+ E S+   + + +  D   
Sbjct: 4   IQAIRGTRDILPSESPLWVVIEGIARQVLSQSAYREIRTPIFEMSELFARGIGEATDAVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++S +D  G+ I+LR ++TA L R   +N         R + +GP FR E+   GR R
Sbjct: 64  KEMYSFEDRGGRSIALRPEITAGLVRAFIQNKLFAQGGVQRLWHLGPAFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKILDGILEKI 182
           QF Q DV+ +GS    AD E+  +    L  +G+K      +      +R+     L   
Sbjct: 124 QFHQLDVEILGSRDARADVEIIAIATQILNTLGLKALSLDLNSVGSGEDRRNYRDALVAY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                 +L+         D  D+     +++L  + +                    ++ 
Sbjct: 184 FTPYKLELD--------TDSRDRLDRNPLRILDSKDKRTQE---------IVTDAPSLLD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FLS D  +    + + +                               I+  +VRGL+YY
Sbjct: 227 FLSDDSRRHFDAVQQHLTNIGID-----------------------FTINPRLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E         +        +V GGGRYDGLV++  G + PA GF +G+ RL++ L
Sbjct: 264 THTAFEI--------QSSDLGAQATVCGGGRYDGLVAQLGGPDTPAIGFGMGMERLVILL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + +   T        + I  +     +  +       LR  G   E+ L S   FG Q K
Sbjct: 316 EQMGQYTTE----PLLDIYLISRGKKAELQSVKLAHQLRQNGYSVEVDL-SGSAFGKQFK 370

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            ADR    L +I G  E     +Q+K L   ++            + 
Sbjct: 371 RADRSGAVLGLILGDAEVDAQKVQLKWLGSNEQSELTQAELVKKMDE 417


>gi|195400941|ref|XP_002059074.1| GJ15372 [Drosophila virilis]
 gi|194141726|gb|EDW58143.1| GJ15372 [Drosophila virilis]
          Length = 520

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 124/507 (24%), Positives = 222/507 (43%), Gaps = 59/507 (11%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++
Sbjct: 54  NQKFTLKTPKGTRDYAPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED 113

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     G
Sbjct: 114 ---SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTRG 169

Query: 124 RFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           R+R+F QCD D         ADAE   ++A+ L+ +     DY I +N+R++LDG+ E  
Sbjct: 170 RYREFYQCDFDIAGTYDPMLADAECVKIVAEVLDTLD--IGDYVIKLNHRQLLDGMFEAC 227

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+      N    +  A+DKLDK     V+  + E              L     D +  
Sbjct: 228 GVPP----NNFRAICSAVDKLDKSPWAEVRKEMVEE-----------KGLDGATADRIGE 272

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +     + E       +K      KG   + ++ +     G    R+    ++ RGL
Sbjct: 273 YVRLSGGAELVEQLLADPKLKAVPNAVKGLEGMQLLLKYCSLFG-LEQRVSFDLSLARGL 331

Query: 300 EYYTGCVYEAILGFPVMNEK-------------QKPVVFGSVGGGGRYDGL--VSRFKGQ 344
           +YYTG +YE +L     +               ++    GSV GGGRYD L  +   +G+
Sbjct: 332 DYYTGVIYEGVLKAEPGSTGSPVKTLQNGDQAPEQGGTVGSVAGGGRYDNLVGMFDPRGK 391

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            VP  G SIG+ R+   L++  +++        V +           +       L  AG
Sbjct: 392 AVPCVGVSIGVERIFSVLEAKFAASKVKLRTNDVEVYVASAHKGLHEQRLRVLNQLWDAG 451

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I+AE     +     QL++ +    PLAI+ G  E ++G+++++++   +E         
Sbjct: 452 IKAEHSYKVNPKLLVQLQHCEEHQIPLAIVLGDAELAQGIVKLREVRTRQES-------- 503

Query: 465 SWREARVAQITIPISELVSTVKKILQE 491
                      + ++EL + +++ LQE
Sbjct: 504 ----------NVTLAELPAEIRRRLQE 520


>gi|83592087|ref|YP_425839.1| histidyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|123753289|sp|Q2RWE3|SYH_RHORT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|83575001|gb|ABC21552.1| histidyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 415

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 99/462 (21%), Positives = 180/462 (38%), Gaps = 57/462 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D    E R    + ++ R + E +GF  I TP+ E++D   + L D  D   
Sbjct: 4   LQPVRGTHDYLPDEARSHRHVEETARTVAERFGFGEIITPIFEFTDVFARTLGDTSDVVT 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++  D  G  ++LR + TA +AR           P + +  GP+FR+E+   GR RQ
Sbjct: 64  KEMYTFTDRSGDSLTLRPENTAGVARAFISGGLAQNVPVKLFYRGPMFRHERPQKGRLRQ 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKIGLH 185
           F Q  V+ +G+    AD E+  + +  L A+G+      +   + + +  +     +  +
Sbjct: 124 FHQVGVELIGAENPLADVEVIALGSQLLGALGVGGRTILHLNSLGDPESREAYRAALVSY 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                        + D L++     +++L  +   D +                ++  L+
Sbjct: 184 LSGH-----RDSLSRDSLERLERNPLRVLDSKDEGDRA---------VVAGAPRLIDHLN 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                               E        ++  +   G      +I   +VRGL+YY   
Sbjct: 230 --------------------EASRAFFAGVTGGLEALGIP---FEIDPLLVRGLDYYGHT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +               G+V  GGRYDGL+ +  G   P  G++ G+ RL + + + 
Sbjct: 267 AFEFVTTD--------LGAQGTVMAGGRYDGLIRQMGGSQTPGVGWAAGVERLSMLMAAD 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                    M       +    D   +       LR  G+  +     S N G ++K A+
Sbjct: 319 RVGAPRPLAM-------IPAGPDDEVEALKLAHALRQGGLFVDFGY--SGNLGKRMKRAN 369

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           R N   AII G  ER+ G + ++DL  G++ +  +   E + 
Sbjct: 370 RINARAAIILGGEERANGTVVVRDLDSGEQETIGLAVLEEFL 411


>gi|168702989|ref|ZP_02735266.1| histidyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 450

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 143/457 (31%), Positives = 220/457 (48%), Gaps = 35/457 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      GF D     +  R  +L   R +Y +YGF PI+TP  E  D L       D  
Sbjct: 10  ITPRTLSGFRDYLPAVMLAREEVLRRAREVYRSYGFTPIDTPACESLDVLLGKGG--DES 67

Query: 67  NKGVFS-LQDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           +K V+  L     +  + LR+DLT P AR+ A+  + +  P + Y +GPV+R E+ G GR
Sbjct: 68  DKLVYRVLSARGDKAEMGLRFDLTVPFARFSAQYINELGTPFKRYAMGPVWRGERPGQGR 127

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F QCD D +G+++  AD E  +++ D   A+    + + I INNR +L+G+LE +G+
Sbjct: 128 YREFWQCDFDTIGTTSNAADIEAALVINDLFTALQF--DRFEIRINNRMVLNGLLESLGI 185

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                      VLR++DKL K G + V             +  + A +T EQ + ++   
Sbjct: 186 ADK-----AAPVLRSLDKLLKIGREKVAE-----------EMVREAGITPEQANRVLMMT 229

Query: 245 SIDLEKS---MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +                        G   L  +  + + +G    RIKI  +I RGL+Y
Sbjct: 230 DLTGPNEQLLTDLEAWFGGANEKATAGIRCLRELLTVAKAAGVAEGRIKIDLSICRGLDY 289

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG +YE  L              GSV  GGRYD L S++  Q +P  G S+G+ RLI A
Sbjct: 290 YTGTIYETFLTD--------LPGIGSVCSGGRYDNLASKYTKQVLPGVGASLGVDRLIAA 341

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++ L           P  +  ++ D+  L  YQ   + LR AG+  E+F   +K  G QL
Sbjct: 342 MEEL-KHPLLTGATTPAQVLVVNFDAARLGDYQRIARALRAAGVSVEVFPD-AKKVGVQL 399

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            YA++R   LA+I G  E  +G+ ++KDLAK +E + 
Sbjct: 400 GYAEKRGFKLAVIAGPAEFEQGVWKVKDLAKREEKTI 436


>gi|116181988|ref|XP_001220843.1| hypothetical protein CHGG_01622 [Chaetomium globosum CBS 148.51]
 gi|88185919|gb|EAQ93387.1| hypothetical protein CHGG_01622 [Chaetomium globosum CBS 148.51]
          Length = 517

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 121/527 (22%), Positives = 209/527 (39%), Gaps = 76/527 (14%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K  K   + P+G  D    ++ +R +I  +I ++++ +G   I+TP+ E     GK+
Sbjct: 1   MAPKAPKFEIKTPKGTRDWSGPDMVLREKIFKTITDVFKRHGGITIDTPVFELK---GKY 57

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             D    +K ++ L D  G+  SLRYDLT P ARY+A N D  V   + Y I  V+R ++
Sbjct: 58  GED----SKLIYDLADQGGELCSLRYDLTVPFARYLAMNKD--VTQIKRYHIAKVYRRDQ 111

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
               + R       D +   A     E+  ++ +  E +G  +  Y I +N+RKILDG+ 
Sbjct: 112 PAVKKGRMREFGVYDAMIPDA-----EIIRIINEVFEGLG-WQGKYTIKLNSRKILDGLF 165

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +  G+      N    +  A+DKLDK     VK  + +              L  E  D 
Sbjct: 166 QVCGVPD----NLIRPISSAVDKLDKMPWADVKKEMVDE-----------KGLAPEVADK 210

Query: 240 MVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +  ++ +  ++ + E     E +    + ++GF ++ ++   +      ++ +    ++ 
Sbjct: 211 IGKYVVLKGQRDLIEKLKQDEDLAANPSMQQGFADMDLLFTYLEAFS-AAHSVSFDLSLA 269

Query: 297 RGLEYYTGCVYEAILGFPV--------------------------MNEKQKPVVFGSVGG 330
           RGL+YYTG +YE +                                      +  GS+  
Sbjct: 270 RGLDYYTGVIYEVVTEGSAPTAPASGDAKDKPSKKKGGKPGDPDEDRSDDPTLGIGSIAA 329

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD-- 388
           GGRYD LV  F G+              I ++          +    V +       D  
Sbjct: 330 GGRYDNLVGMFSGKTQVPCVGISFGIDRIFSITQASQKKKERRNEVDVFVMAFGGGKDFS 389

Query: 389 -SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
             L++       L  AGI+AE          NQ K A+    P A+I G  E ++G  ++
Sbjct: 390 GLLTERSQICARLWDAGIKAEFLYKVKPKLQNQFKAAETGGVPFALILGEDELAQGKAKL 449

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           K++  G      +K  E           I +  L+  V+  L   +E
Sbjct: 450 KEM--GLPEDHPLKEGEL----------ISLDNLIEEVQTRLTRKQE 484


>gi|260101665|ref|ZP_05751902.1| histidine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260084525|gb|EEW68645.1| histidine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 428

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 108/465 (23%), Positives = 180/465 (38%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D   ++     ++ ++ RN +    +  I TP  E  +   +   D  + 
Sbjct: 1   MRVQKPKGTVDILPEQSGSWQKVEETARNFFNRANYREIRTPSFENYEIFSRSSGDSSEI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   E+         P   + +   FR E+   
Sbjct: 61  VEKQMYDFNDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GSS   AD +  MM  D L  +G+K    HI        RK     
Sbjct: 121 GRQREFHQIGVESFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGDEQVRKGYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        DKL+E        D   +     +++L  +   D                 
Sbjct: 181 LVNYFTPVKDKLSE--------DSQRRLRDNPLRILDSKDDRDKKF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  + + +   + +++          ++L                       VRG
Sbjct: 224 KIRDFLDDNSKANFESILKMLDQLGIDYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRYD LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDKSLWESAT-----TILGGGRYDHLVEEFNGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+        + +   +     +    +  K     + LR  G  A+  + + K   
Sbjct: 316 MLVLEKQN---PELFKNEGIDFFITNIGEGTAQKAIEIVRSLRKQGFEADFDV-NQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q K ADR      I  G  E + G+L IK LA GK +   +++ 
Sbjct: 372 GQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDI 416


>gi|332305585|ref|YP_004433436.1| histidyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172914|gb|AEE22168.1| histidyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 426

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 103/498 (20%), Positives = 191/498 (38%), Gaps = 81/498 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC  ++  +      +IR +  +YG+  + TP++E +D   + +
Sbjct: 1   MSKQ----IQAIRGMNDCLPEQSGLWQWAEKAIREVVASYGYQEVRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +   ++LR + TA + R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFADRNDDSLTLRPEGTASVVRAGNEHGLLYNQQQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G +    DAE+  + A   +  GI        +       R+ 
Sbjct: 117 PQKGRYRQFHQFGVEVFGLAGPDIDAEVIALSARLWKKFGISEQVTLELNSLGSNQARET 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L +  L   + L+E        D L +     +++L  +     +           
Sbjct: 177 YRQALVEYLLERKEHLDE--------DSLRRLQSNPLRVLDSKNPQVQAAIT-------- 220

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L  + ++    L E +                            + +++  
Sbjct: 221 -DAPSLIDYLDAESKEHFQALCERLDAL-----------------------GIQYRVNPR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+     GF+IG
Sbjct: 257 LVRGLDYYNRTVFEWVT--------DSLGAQGTVCAGGRYDGLVEQLGGKTTQGVGFAIG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           + RL++ L++  +          V +       +         + LR     +R +   G
Sbjct: 309 LERLVLMLQANGAEEFVPSP---VDVYVTAMGDEVELYALKIAESLRDVMPSLRVQTHFG 365

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              NF  Q+K AD+    +A++ G  E+    + IK                 +      
Sbjct: 366 GG-NFKKQMKRADKSAARVALVLGESEQQEAQVSIK-----------------FLREDKP 407

Query: 473 QITIPISELVSTVKKILQ 490
           QI +  SEL ST+  +  
Sbjct: 408 QIRVARSELESTLSTLFS 425


>gi|145295768|ref|YP_001138589.1| histidyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140845688|dbj|BAF54687.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 429

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 99/480 (20%), Positives = 183/480 (38%), Gaps = 69/480 (14%)

Query: 2   GKKTKLR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
            K  KL+    P+G  D    +      + D+  +     GF+ IE P+ E +    + +
Sbjct: 6   SKSEKLQSFAAPKGVPDYAPPKSAAFLAVRDAFVDQAHKAGFEHIELPIFEDTGLFARGV 65

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 66  GESTDVVSKEMYTFADRGERSVTLRPEGTAGVMRAVIEHSLDRGQLPVKLNYAGPFFRYE 125

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +   +  ++G+K          D H    
Sbjct: 126 RPQAGRYRQLQQVGVEAIGVDDPALDAEIIALADRSYRSLGLKDFRLELTSLGDRHCRPE 185

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   L  + L  + +    +  LR +D                       + T  A
Sbjct: 186 YRQKLQDFLFALPLDEETRKRAEINPLRVLDDK----------------RPEVQEMTADA 229

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L  + +D                            +       ++ L+   G       
Sbjct: 230 PLMLDHLDA---------------------------ECREHFETVTGLLDDMGVP---YV 259

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   G
Sbjct: 260 INPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLSGIG 311

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           + +G+ R ++AL++   +    +    V +  +    D+          LR AGI  +M 
Sbjct: 312 YGLGVDRTMLALEAEGVTVGAERR---VDVYGVPLGKDAKKALAGIVNKLRAAGISTDMS 368

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            G  +     +K ADR N    ++ G  E     + +KD+   ++    +    ++ + +
Sbjct: 369 YG-DRGLKGAMKGADRSNALYTLVLGEQELENNTIAVKDMRAHEQHDVALDEVVAFLQGK 427


>gi|94968234|ref|YP_590282.1| histidyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|122986376|sp|Q1ISE2|SYH_ACIBL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|94550284|gb|ABF40208.1| histidyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 441

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 91/476 (19%), Positives = 174/476 (36%), Gaps = 55/476 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            +  RG  D    +  + NR+  ++R++++ Y F  I TP+ E +    + +  + D  +
Sbjct: 2   IKAVRGTRDLLPPDTELWNRVEATVRDVFQRYNFHEIRTPIFEDTALFARGVGEETDIVS 61

Query: 68  KGVFSLQDD------DGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKH 120
           K +F+ +D         Q ++LR + TA + R   E+         + Y IGP FR E+ 
Sbjct: 62  KEMFTWEDKARAQSEKSQQLTLRPENTAGVVRAYIEHQMAKSGGLQKLYYIGPQFRRERP 121

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCM-MMADTLEAVGIKRNDYHIGINNRKILDGIL 179
             GR+RQF Q   + +G     +++      + + L  +  +       +    + D   
Sbjct: 122 QKGRYRQFFQIGAEVIGPPPSGSESPARDAEVIEMLATLLEEVGLTGWTLYLNSVGDANC 181

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                    +    +      D   +     +++L  +   D             E +  
Sbjct: 182 RPAYNEALRQALASVKDKMCGDCQRRAETNPLRVLDCKVPEDQP---------IIETLPK 232

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +L    +     +  ++                               ++  +VRGL
Sbjct: 233 IGDYLDDACKAHFAAVRAMLDK-----------------------VGVPYTVNPRMVRGL 269

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT   +E            +     +V GGGRYDGL     G   P  GF+IG  RL+
Sbjct: 270 DYYTRTTFEFT--------HGELGAQSAVLGGGRYDGLSEALDGPKAPGIGFAIGEDRLV 321

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +AL++ +       E   +        + + ++     + LR  G+R E+   S +    
Sbjct: 322 MALQAAK-----PAEPMTIDAYVAPLGAGTNAEALGICRKLRRQGLRVELGDESFR-LKK 375

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             + A+R      +I G  E +     +K+LA GK+ S        +     A+ T
Sbjct: 376 SFEAAERAGAKYIVICGENEVANNEFSVKELATGKQESVARAELAFYIRNHGARKT 431


>gi|327313430|ref|YP_004328867.1| histidine--tRNA ligase [Prevotella denticola F0289]
 gi|326946039|gb|AEA21924.1| histidine--tRNA ligase [Prevotella denticola F0289]
          Length = 455

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 145/486 (29%), Positives = 220/486 (45%), Gaps = 57/486 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+  RN I D+IR +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGPEEMAKRNYIFDTIRQVYALYGFQQIETPAMETLHTLMGKYGEEGDKL 63

Query: 65  ---RPNKGVFSLQDDDGQWIS---------------LRYDLTAPLARYVAENFDTIVFPC 106
                N G + L+      ++               LRYDLT P ARYV  + + +  P 
Sbjct: 64  LFKILNSGDY-LKSVSDDELTERNTLKMQTKLCEKGLRYDLTVPFARYVVMHREELQLPF 122

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       G+      
Sbjct: 123 KRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSKFGV---RVQ 179

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E         
Sbjct: 180 IKINNRKILTGIAEVIGEKDK-----IVDITVAIDKLDKIGLDNVNAELREN-------- 226

Query: 227 TKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
               N++ E I+ +   + ++   E+ +  + EL+K +  G KG  E   I ++++ SG 
Sbjct: 227 ----NISEEAIEKLQPVIKLEGTNEEKLAVIAELLKDSETGLKGVEETRFILDMLKTSG- 281

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
             N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F   
Sbjct: 282 LKNEIQLDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGIFGMP 332

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +   G S G  R+   L +L+       +   +L           +         R AG
Sbjct: 333 GLSGVGISFGADRIYDVLNALDLYPKESVQGTQLLFINFGEKET--AYCMPIIAAARQAG 390

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           IRAEM+  ++K    Q+ YA+ ++     + G  E     + +KD+A G +     +   
Sbjct: 391 IRAEMYPDNAK-MKKQMSYANAKSIGFVALAGESEIEADKITLKDMATGNQQLVTAEEMI 449

Query: 465 SWREAR 470
           S    R
Sbjct: 450 SLIMQR 455


>gi|94311043|ref|YP_584253.1| histidyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93354895|gb|ABF08984.1| histidyl tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 447

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 105/501 (20%), Positives = 194/501 (38%), Gaps = 84/501 (16%)

Query: 1   MG--KKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M   K   ++A +  +G  D    +  + +    + R++   YG+  I TP++E++    
Sbjct: 1   MSEDKTKAVKALQGVKGMNDMLPTDAPLWDMFESAARSMLRAYGYQQIRTPIVEHTQLFV 60

Query: 58  KFLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
           + + +  D   K ++S  D  +G+ ++LR + TA   R   E+      P R + IGP+F
Sbjct: 61  RGIGEVTDIVEKEMYSFTDSLNGENLTLRPEGTAAAVRSTIEHNLLYDGPKRLWYIGPMF 120

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHI 167
           R+E+   GR+RQF Q   + +G +    DAE+ +M     + +G+             H 
Sbjct: 121 RHERPQRGRYRQFHQLGAEALGFAGPDVDAEIILMCQRLWDDLGLTNVRLELNSLGQAHE 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              +R+ L   LE      D+            D   +     +++L  +          
Sbjct: 181 RAAHREQLIKYLEGFQDILDE------------DSKRRLYTNPLRVLDTKNPALQEMAA- 227

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                       ++ FL  +       +  ++                          + 
Sbjct: 228 --------NAPKLIDFLGEESLAHFEGVQRILLAN-----------------------NI 256

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
             KI+  +VRGL+YY   V+E I          K    G++ GGGRYD L+ +  G+  P
Sbjct: 257 PFKINPRLVRGLDYYNLTVFEWIT--------DKLGAQGTIAGGGRYDPLIQQMGGKPAP 308

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           A G+++GI R+I  ++      +         +  +     +  +  +  + LR AG+  
Sbjct: 309 ACGWAMGIERIIELIREENLVPDTQ----GCDVYMVHQGELANQQAMIAAERLRDAGLDV 364

Query: 408 EMF---LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            +     G S +F +Q+K AD      A+I G  E + G +Q+K L  G           
Sbjct: 365 VLHATPDGKSGSFKSQMKRADASGASFAVIIGDDEIAAGTVQVKQLRGGN---------- 414

Query: 465 SWREARVAQITIPISELVSTV 485
                   Q T+P  ++V  +
Sbjct: 415 --VAEGGQQTTVPAEQVVEFI 433


>gi|330807648|ref|YP_004352110.1| histidine--tRNA ligase,(histidyl-tRNA synthetase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375756|gb|AEA67106.1| Histidine--tRNA ligase,(Histidyl-tRNA synthetase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 429

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 101/483 (20%), Positives = 192/483 (39%), Gaps = 65/483 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRYFEGTVARLLDNYGYRQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + +GP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFDDRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYVGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++         DAE+ +M       +G++       +      +R 
Sbjct: 117 RPQKGRYRQFHQIGLEVFNLEGPDIDAELIVMTWRLWGELGLRDAVKLELNSLGTSESRG 176

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +      DKL+E        D   +     +++L  +       +    A L 
Sbjct: 177 RYREALVEFLSAHLDKLDE--------DSQRRLKTNPLRVLDTK-------NAETQAVLV 221

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 M  +L  +       L   +                               I+ 
Sbjct: 222 D--APKMADYLDDESRAHFEGLKARLDA-----------------------VGIPYVINP 256

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY+  V+E +          K    G+V  GGRYDGLV +  G+  P  GF++
Sbjct: 257 KLVRGLDYYSKTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQMGGKPTPGVGFAM 308

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFL 411
           GI RL++ L++L+     +     V +      ++        ++ +R     +R ++  
Sbjct: 309 GIERLVLMLEALDKVPEELARQVDVYLCAFGEAAEL--AALSLSERIRDQLPNLRLQINA 366

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREAR 470
           G+  +F +Q K AD+     A+I G  E ++ ++  K L  +G++ S       +     
Sbjct: 367 GAG-SFKSQFKKADKSGALYALILGDDELAQQVVGFKPLRGQGEQQSIAWDALAAHLATC 425

Query: 471 VAQ 473
           V Q
Sbjct: 426 VVQ 428


>gi|296110401|ref|YP_003620782.1| histidine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295831932|gb|ADG39813.1| histidine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 433

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 178/468 (38%), Gaps = 55/468 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T    + P+G AD    +      +  + R ++ +Y F  + TP+ E  +   +  
Sbjct: 1   MAKPT---FQRPKGTADLLPDQTVKWQHVESTARLLFGDYNFKEVRTPIFENFEIFSRSA 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFR 116
            D  D   K ++   D   + I+LR + TA + R   EN         P +T+ IGP+FR
Sbjct: 58  GDTSDVVTKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEFDKPYKTFYIGPMFR 117

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY-HIGINNRKIL 175
            E+   GRFRQF Q  V+  GS +   D E+  M  D  + +G++        + +++  
Sbjct: 118 YERPQAGRFRQFHQIGVEAFGSKSPALDVEIIAMAIDFFKTLGLQNLKVAVNTLGDQRSR 177

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
               + +  +     +E      + D   +     +++L  +   D              
Sbjct: 178 ASYRQALIDYLKPHFDEL-----STDSQTRLEQNPLRVLDSKDARDQVF---------VA 223

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++ +LS +  +   ++  ++K      +    +                       
Sbjct: 224 DAPSILDYLSPEATEHWQQVQTILKALDIDFEIDATM----------------------- 260

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   ++E +                ++ GGGRY GLVS F G   P  GF IGI
Sbjct: 261 VRGLDYYNDTIFEIMTVD------DHLKGAATIAGGGRYSGLVSEFGGPETPGVGFGIGI 314

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RLI  L + + +  +           ++    +        Q +R+ G   E      +
Sbjct: 315 ERLISLLSTQQVAPIDDHGFD---FYVVNIGEKTDVVATQIAQAIRSFGYVTERDY-LGR 370

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +   Q K ADR      +  G  E S  +  IK++  G++ + ++   
Sbjct: 371 SAKAQFKTADRHRAKYVVTIGEQELSDQVANIKNMTTGQQKTVKLAEL 418


>gi|282852108|ref|ZP_06261466.1| histidine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282556868|gb|EFB62472.1| histidine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 428

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 111/465 (23%), Positives = 183/465 (39%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E     ++    RN ++   +  I TP  E  +   +   +  D 
Sbjct: 1   MKVQRPKGTVDILPAESGSWEKVETIARNFFKRANYREIRTPSFENYEVFSRSSGESSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   EN         P   Y I   FR E+   
Sbjct: 61  VEKEMYDFNDKGGRHITLRPEGTAGVVRAYVENKLYGPDVVKPFNVYYIDNTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS++  AD E  MM  D L  +G+K  + HI        RK     
Sbjct: 121 GRQREFHQIGVESFGSNSPLADVETIMMGHDLLAELGVKNYELHINTLGNAQVRKDYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +  +  +++L  +   D                 
Sbjct: 181 LVNYFTPLKDQLSE--------DSQRRLSMNPLRILDSKAEEDKQF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +V +L  D +K+   + ++++         ++L                       VRG
Sbjct: 224 RIVDYLDEDSKKNFETITDMLEQLGINYVLDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDKNLWESAT-----TILGGGRYNHLVEEFDGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK    +    +    +     +    +  K     + LR    +A+  +   K   
Sbjct: 316 MLVLKEQNPALFEDE---GIDFFITNIGEGTEMKAVEIARSLRKQDFKAQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q + ADR +    I  G  E   G+L IK LA GK L   +++ 
Sbjct: 372 QQFRKADRVHAKFVITLGAKELENGVLNIKRLADGKTLDLSLEDL 416


>gi|195130797|ref|XP_002009837.1| GI15022 [Drosophila mojavensis]
 gi|193908287|gb|EDW07154.1| GI15022 [Drosophila mojavensis]
          Length = 520

 Score =  245 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 122/488 (25%), Positives = 215/488 (44%), Gaps = 41/488 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++
Sbjct: 54  NQKFTLKTPKGTRDYAPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED 113

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     G
Sbjct: 114 ---SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTRG 169

Query: 124 RFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           R+R+F QCD D         ADAE   ++A+ L+ +     DY I +N+R++LDG+ E  
Sbjct: 170 RYREFYQCDFDIAGTYDPMLADAECVKIVAEVLDTLD--IGDYVIKLNHRQLLDGMFEAC 227

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+      N    +  A+DKLDK     V+  + +              L     D +  
Sbjct: 228 GVP----ANNFRAICSAVDKLDKSPWADVRKEMVDE-----------KGLDGATADKIGE 272

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +     + E     E +K      KG   + ++ +     G    RI    ++ RGL
Sbjct: 273 YVRLSGGAELVEQLLADEKLKAVPNAVKGLEGMQLLLKYCSLFG-LEERISFDLSLARGL 331

Query: 300 EYYTGCVYEAILGFPVM-------------NEKQKPVVFGSVGGGGRYDGLVSRFKGQ-- 344
           +YYTG +YE +L                     ++    GSV GGGRYD LV  F  +  
Sbjct: 332 DYYTGVIYEGVLKAEPSAPASPVKELHNGDQALEQSGTVGSVAGGGRYDNLVGMFDPRGK 391

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            VP  G SIG+ R+   L++  +++        V +           +       L  AG
Sbjct: 392 AVPCVGVSIGVERIFSVLEAKFAASKVKLRTNDVEVYVASAHKGLHEQRLRVLNQLWNAG 451

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I+AE     +     QL++ +    PLAI+ G  E ++G+++++++   +E +  + +  
Sbjct: 452 IKAEHSYKLNPKLLVQLQHCEEHQIPLAIVLGDAELAQGIVKLREVTTRQESNVNLADLP 511

Query: 465 SWREARVA 472
           +    R+ 
Sbjct: 512 NEIRRRLQ 519


>gi|299530505|ref|ZP_07043925.1| histidyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298721481|gb|EFI62418.1| histidyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 438

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 95/480 (19%), Positives = 183/480 (38%), Gaps = 64/480 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  KL A   +G  D    +          +R++   + +  + TP++E +    + L
Sbjct: 1   MAKNEKLTA--VKGMNDILPPDSARWEWFEAKVRDLMGRFAYRNMRTPIVEPTALFVRGL 58

Query: 61  PD-EDRPNKGVFSLQDDDG-----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            +  D   K ++S +D        + ++LR + TA + R V EN        R + IG +
Sbjct: 59  GEVTDIVEKEMYSFEDRADKHGQAEHLTLRPEGTAGVVRSVVENNLLYEGGKRLFYIGQM 118

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           FR EK   GR+RQF Q  V+ +G +    DAE+ ++ A   + +GI+             
Sbjct: 119 FRREKPQRGRYRQFHQVGVEALGFAGPELDAEVILLAAQLWKELGIEGVRLE-------- 170

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L  +G   + K +   ++       +    +  + +                    
Sbjct: 171 ----LNSLGQPEERKTHREALIAYFEQHTEVMDEEAKRRMYSNPLR-VLDTKNPAMQEMV 225

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L    +  +  + +++                               ++  
Sbjct: 226 NAAPRLMDYLGDASKAHLKAVQDILDANDVA-----------------------WSLNPR 262

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRG++YY   V+E I          K     ++ GGGRYD L+    G+  PA G+ +G
Sbjct: 263 LVRGMDYYNLTVFEFIT--------DKLGSQSTICGGGRYDYLIEEIGGKPAPAVGWGMG 314

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + R++  LK +              +  +  D+  L +     Q LRTAG+  +M   + 
Sbjct: 315 VERVLEVLKEVGVEIPQPAA----DVYAIIPDASVLPQVFKTVQQLRTAGVAVQMHAAAG 370

Query: 415 ------KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESW 466
                  +  +Q K AD      A+I G+ E ++G + +K L  G+  ++ + + +   W
Sbjct: 371 GSAEGMGSMKSQFKKADGSGARFALIFGSDELAQGKVTVKSLRDGEGQQVQQALADVALW 430


>gi|255556918|ref|XP_002519492.1| histidyl-tRNA synthetase, putative [Ricinus communis]
 gi|223541355|gb|EEF42906.1| histidyl-tRNA synthetase, putative [Ricinus communis]
          Length = 503

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 115/460 (25%), Positives = 206/460 (44%), Gaps = 38/460 (8%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+    P+G  D P +E+R+RN + ++ R + + YGF+ ++ P+LE      +   +E 
Sbjct: 82  EKIDVNPPKGTRDFPPEEMRLRNWLFNNFREVSKLYGFEEVDFPVLETEALFIRKAGEEI 141

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           R    ++  +D   + ++LR +LT  LAR V +   ++  P + + +G  +R E+   GR
Sbjct: 142 RD--QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVPLPLKWFAVGQCWRYERMTRGR 199

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q ++D +G    TA+AE+   +    + +GI  +D    +++RK+L  +L    +
Sbjct: 200 RREHYQWNMDIIGVPGVTAEAELISSIVTFFKRIGITASDVGFKVSSRKVLQEVLRCYSI 259

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                 N    V   IDK++K  +  +K  L                ++ E ++ ++  L
Sbjct: 260 SD----NLFGKVCIIIDKIEKIPVAEIKKELK------------SVGMSEEAVEELLQVL 303

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           SI     + E+           +   +L  +  L  K GY S  I+  +++VRGL YYTG
Sbjct: 304 SIKSLTKLEEIL------GGAGEAIGDLKQLFSLAEKFGY-SEWIQFDASVVRGLAYYTG 356

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E            +     ++ GGGRYD L+S F G ++PA GF  G + ++  LK 
Sbjct: 357 IVFEGF---------DREGKLRAICGGGRYDRLLSTFGGDDLPACGFGFGDAVIVELLKE 407

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                    +   V       DSD          +LR  G   ++ L   K      K A
Sbjct: 408 KGLLPELGLQ---VENIVCALDSDLQGAAARVATILREKGQNVDLVL-EDKPLKWVFKRA 463

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            R N    ++ G  E  +GM+ +K L+ G++   ++   +
Sbjct: 464 ARINAQKLVLVGKTEWQKGMVGVKILSTGEQYEVKLDELQ 503


>gi|307206497|gb|EFN84523.1| Histidyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 604

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 118/491 (24%), Positives = 206/491 (41%), Gaps = 49/491 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             KL  + P+G  D   + + +R  +L+ I  +++ +G + I+TP+ E  D L     ++
Sbjct: 157 PNKLILKTPKGTRDYSPEHMVLRMGVLEKIIAVFKRHGAETIDTPVFELKDVLTGKYGED 216

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ ++LRYDLT P ARY+A +    +             N     G
Sbjct: 217 ---SKLIYDLKDQGGEILALRYDLTVPFARYLAMSKVASMKRYHIG-KVYRRDNPSTTKG 272

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G          C+ +        +    Y I +N+R ILDGI    G
Sbjct: 273 RYREFYQCDFDIAGQYDPMIPDVECIRVVTEALET-LNLGPYMIKLNHRCILDGIFAACG 331

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  A+DKLDK   + VK  + E              L     D +  +
Sbjct: 332 IPPS----KFRSICSAVDKLDKNPWEEVKKEMIEE-----------KGLDEHIADKVGKY 376

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS--NRIKISSTIVRGLEY 301
           +S      +    +  K  +        L  +  L++        +++K   ++ RGL+Y
Sbjct: 377 VSQSGGMELITELKKDKDLMKQSSAVQGLDSMELLLKYCSIYKILDKVKFDLSLARGLDY 436

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLI 359
           YTG +YEAIL           V  GS+ GGGRYD L  +   K +NVP  G S+G+ R+ 
Sbjct: 437 YTGVIYEAILCGD-------DVGVGSIAGGGRYDNLVGMFDNKNKNVPCVGVSLGVERIF 489

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L++  ++           +       +   +       L   G++AE     +     
Sbjct: 490 SILEAKLTNKGLKMRSTETEVFVASAQKNMHEERMKIIADLWENGVKAEHSYKKNARLLV 549

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           QL++ +    PLAII G GE ++G + ++ ++  KE                    +P  
Sbjct: 550 QLQFCEENGIPLAIIVGEGELAKGEVTLRVVSTRKET------------------RVPRD 591

Query: 480 ELVSTVKKILQ 490
            ++  ++K+L+
Sbjct: 592 NIIEEIRKLLE 602


>gi|329121508|ref|ZP_08250132.1| histidine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327469423|gb|EGF14893.1| histidine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 418

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 104/466 (22%), Positives = 181/466 (38%), Gaps = 52/466 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +  RG  D   + I     +   IR I   Y F+ I TP  E ++   + + D  D   K
Sbjct: 2   KRIRGTQDILPENIYKWQYLEQKIRQICSLYNFEEIRTPTFEATELFLRGIGDTTDVVTK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            +++  D  G+ I+LR + TA + R   EN         + + IG +FR ++   GR+R+
Sbjct: 62  EMYTFNDRGGRSITLRPENTAAVVRSYLENKMYVDNTTHKLFYIGSMFRYDRPQAGRYRE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLHG 186
           F Q  ++ +GS     DAE+  +     + +G+K  + HI    + +      EK+    
Sbjct: 122 FHQFGLEVLGSQDPYVDAEVIDLAVQFFKDLGLKELELHINSVGHVECRKVFHEKLIAFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + K +E        D   +     +++L  +  T              E    +V  L  
Sbjct: 182 EPKKDEL-----CEDCNTRLYKNPLRVLDCKNTT---------CKRIIEGAPNIVDCLCD 227

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D  +   +L   +          +EL                  +   +VRGL+YYT   
Sbjct: 228 DCSEKFEKLKTYL----------DEL-------------GIEYIVDPLLVRGLDYYTNTA 264

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +         +      ++ GGGRYDGLV+   G  VP  G +IG+ RLI+AL+   
Sbjct: 265 FEIMY--------EPLGAQSTICGGGRYDGLVNEIGGIQVPGIGMAIGMERLILALEQQN 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  E     +        +  K     + LR   I A   +   K+  + LK AD+
Sbjct: 317 LFPEVKNEN---QVFIATVGEKARVKGVGIVKALRKQQIHAGTTMQE-KSLKSLLKQADK 372

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P  +I G  E  +G   +K++   ++   + +    + +  V 
Sbjct: 373 EKYPFVVIIGEDELQKGKAILKNMETKEQKEIDFETLVEYIKETVK 418


>gi|23012430|ref|ZP_00052516.1| COG0124: Histidyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 384

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 208/375 (55%), Positives = 262/375 (69%), Gaps = 13/375 (3%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L+  LPRGF D    +I  + R+LD+IR  +E YGF+ +ETP +EY+++LGKFL
Sbjct: 1   MAKAETLKPRLPRGFPDRHEADIAAQARMLDTIRQTFELYGFEALETPFVEYTEALGKFL 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           PD DRPN+GVFS QDDD QW+SLRYDLTAPLAR+VAENFD I  P R+YR G VFRNEK 
Sbjct: 61  PDLDRPNEGVFSFQDDDEQWLSLRYDLTAPLARHVAENFDAIPKPYRSYRAGYVFRNEKP 120

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           GPGRFRQF+Q D D VG+ +  ADAE CM+MADTLE +G+    Y + +NNRK+LDG++E
Sbjct: 121 GPGRFRQFMQFDADIVGAGSVAADAETCMLMADTLERLGL-AGQYVVKVNNRKVLDGVME 179

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            IGL G DK  +RL VLRAIDKLD+ G  GV+LLLG GR D SGDFTKGA L  + I+ +
Sbjct: 180 AIGLAGPDKAGQRLTVLRAIDKLDRLGPDGVRLLLGAGRKDESGDFTKGAGLADDAIERI 239

Query: 241 VSFLSID------------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           ++++  +             EK     +++V  +  G +G  EL  I  L   +GY  +R
Sbjct: 240 LAYVGFEASPHEGADRMAFWEKFFKSWHDVVGESETGREGIAELHAIMRLCEAAGYGHDR 299

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           ++   ++VRGLEYYTG VYEA L FPV NE  + V FGSV GGGRYDGLV RF+ + VPA
Sbjct: 300 VRADPSVVRGLEYYTGPVYEAELTFPVTNEDGQTVRFGSVAGGGRYDGLVGRFRSEPVPA 359

Query: 349 TGFSIGISRLIVALK 363
           TGFSIG+SRL  AL+
Sbjct: 360 TGFSIGVSRLFSALR 374


>gi|300871818|ref|YP_003786691.1| histidyl-tRNA synthetase class IIa [Brachyspira pilosicoli 95/1000]
 gi|300689519|gb|ADK32190.1| histidyl-tRNA synthetase class IIa [Brachyspira pilosicoli 95/1000]
          Length = 416

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 92/464 (19%), Positives = 180/464 (38%), Gaps = 54/464 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           L  + PRG  D           I + I+ I   YG+  I TPL EY+D   + + +  D 
Sbjct: 3   LNIKKPRGTNDFFYDSSERLEFIENKIKEIVRLYGYKRIRTPLFEYTDLFTRGIGEGTDI 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGR 124
             K +F+ +D  G+ ++LR + TA +AR   EN     +     + +G ++R E+   GR
Sbjct: 63  VGKEMFTFEDRGGRSLTLRPEGTASVARAYVENSLQNEYAINKLFYLGTMYRAERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F Q  ++ +G ++   DAE+  +  + L+  GI   +  I                 
Sbjct: 123 YREFNQFGIECIGGTSPVIDAEVIALNINILKEFGIDNVNLLINTVGCS----------- 171

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                                      + L        +       N     I  ++   
Sbjct: 172 --------------------NCKPNYNRALREAIGERKNELCETCQNRYENNILRILDCK 211

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +   ++ + ++ +        ++       +   + K   N     I + +VRGL+YYT 
Sbjct: 212 NEKCKEILKDIPKFYD--YVCDECKEHFDSLCNELTKINQN---FTIDNMLVRGLDYYTK 266

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS-RFKGQNVPATGFSIGISRLIVALK 363
             +E                  ++ GGGRYD L+      ++VPA G ++G+ RL++ L+
Sbjct: 267 TAFEVQTNA--------LGSQSAILGGGRYDNLIGLFNSNKDVPAVGSAMGLERLLIVLE 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +  +          + +  +    ++ ++     Q+LR   I  +    + K+  NQ K 
Sbjct: 319 NNNNII-----NDRLDVFVIAF-KETQNEVLNIMQLLRAKNISCDFDY-NIKSIKNQFKS 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++RN   A+I G  E      ++K++   +E    + +   + 
Sbjct: 372 ANKRNAKYALIVGEEELKNNKFKLKNMDTSEERDVALSDIAKFI 415


>gi|223044100|ref|ZP_03614139.1| histidyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442494|gb|EEE48600.1| histidyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 420

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 92/463 (19%), Positives = 182/463 (39%), Gaps = 48/463 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++      I + +  + E Y +  I TP+ E ++   + + D  D   
Sbjct: 2   IKIPRGTQDILPEDSIKWRHIENKLDELMELYNYKEIRTPIFESTELFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + ++LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSLTLRPEGTAAVVRSYIEHKMQGNPNQPVKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+ +G+   + DAE+  M+    E+ G+K     I             K  ++
Sbjct: 122 RQFNQFGVEAIGAENPSIDAEVLAMVMHIYESFGLKHLKLVINSIGDSESRKEYNKALVN 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 E +I     D   +     +++L  +   D     T            +  +L+
Sbjct: 182 H----FEPVIDTFCSDCQSRLHTNPMRILDCKIDRDKEAIKT---------APRITDYLN 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D +    ++   +                          +        +VRGL+YYT  
Sbjct: 229 DDSKAYYEQVKHHLDDL-----------------------NIPYVEDPNLVRGLDYYTHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++AL+  
Sbjct: 266 AFELMMDNPNYD-----GAITTLCGGGRYNGLLQLLDGPSETGIGFALSIERLLLALEEE 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               +  +      +  +    ++          LR   ++A+     ++    Q+K AD
Sbjct: 321 GIELDIEENFD---LFIVTMGEEADRYAVKLLNDLRKNDVKADKDY-LNRKIKGQMKQAD 376

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           R N    I+ G  E     + IK++  G+  + ++    ++ +
Sbjct: 377 RLNAKYTIVIGDQELENNSIAIKNMTTGESENIQLDQLINYFK 419


>gi|116629514|ref|YP_814686.1| histidyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311110843|ref|ZP_07712240.1| histidine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273548|sp|Q043X4|SYH_LACGA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116095096|gb|ABJ60248.1| histidyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311065997|gb|EFQ46337.1| histidine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 428

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 111/465 (23%), Positives = 183/465 (39%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E     ++    RN ++   +  I TP  E  +   +   +  D 
Sbjct: 1   MKVQRPKGTVDILPAESGSWEKVETIARNFFKRANYREIRTPSFENYEVFSRSSGESSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   EN         P   Y I   FR E+   
Sbjct: 61  VEKEMYDFNDKGGRHIALRPEGTAGVVRAYVENKLYGPDVVKPFNVYYIDNTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS++  AD E  MM  D L  +G+K  + HI        RK     
Sbjct: 121 GRQREFHQIGVESFGSNSPLADVETIMMGHDLLAELGVKNYELHINTLGNAQVRKDYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +  +  +++L  +   D                 
Sbjct: 181 LVNYFTPLKDQLSE--------DSQRRLSMNPLRILDSKAEEDKQF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +V +L  D +K+   + ++++         ++L                       VRG
Sbjct: 224 RIVDYLDEDSKKNFETITDMLEQLGINYVLDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDKNLWESAT-----TILGGGRYNHLVEEFDGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK    +    +    +     +    +  K     + LR    +A+  +   K   
Sbjct: 316 MLVLKEQNPALFEDE---GIDFFITNIGEGTEMKAVEIARSLRKQDFKAQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q + ADR +    I  G  E   G+L IK LA GK L   +++ 
Sbjct: 372 QQFRKADRVHAKFVITLGAKELENGVLNIKRLADGKTLDLSLEDL 416


>gi|192360368|ref|YP_001981969.1| histidyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190686533|gb|ACE84211.1| histidyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 423

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 98/485 (20%), Positives = 186/485 (38%), Gaps = 75/485 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    +  +   +   + +I   YG+  I  P++E ++   + + +  D  
Sbjct: 3   KIQAIRGMNDLLPADSPLWQYVEAVVTDILARYGYQEIRFPIVEATELFKRSIGEVTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ +D +G  ++LR + TA   R   EN        R + +GP+FR+E+   GR+R
Sbjct: 63  EKEMYTFEDRNGDSLTLRPEGTACCVRACEENGLLYNQTQRLWYMGPMFRHERPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q  V+  G      DAE+ ++ A  L  +G+        +       R      L  
Sbjct: 123 QFHQIGVETFGIQGPDIDAEVLLLSARILRELGVGDAVQLQINSLGSAEARSAYKDALVS 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 ++L+E        D   + G   +++L  +  +  +               +++
Sbjct: 183 YLNQVAEQLDE--------DSKRRLGTNPLRILDSKDTSTQA---------LLNNAPVLL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  +       L +L+                              +++  +VRGL+Y
Sbjct: 226 DYLDEESHAHFEGLKQLLDAAGIA-----------------------YQVNPRLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E +          K     +V  GGRYDGLV +  G+  PA GF IG+ RL++ 
Sbjct: 263 YGKTAFEWVT--------DKLGAQSTVCAGGRYDGLVEQLGGKATPAVGFGIGLERLVLL 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EMFLGSSKNFGNQ 420
           +++L      + +   V +  +    +   +     + +R        +      NF NQ
Sbjct: 315 VQALTVVPEGLDQQADVYLVAVG---NVQQQAFQLAERIRDELPFVRLLAHCGGGNFKNQ 371

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           LK AD+    +A+I G  E   G + +K                 +    VAQ T+   +
Sbjct: 372 LKKADKSGADIALILGEDEVRDGKVVVK-----------------FLRDDVAQQTLSQED 414

Query: 481 LVSTV 485
            V+ +
Sbjct: 415 AVTLL 419


>gi|328872325|gb|EGG20692.1| histidine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 504

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 126/490 (25%), Positives = 210/490 (42%), Gaps = 53/490 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              + P+G  D    ++ IR  + ++I++ ++ +G   IETP+ E  D+L     ++   
Sbjct: 52  FVLKTPKGTQDYTPPQMAIREELFNNIKSCFKKHGAVTIETPVFELKDTLTGKYGED--- 108

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++ LQD  G+  SLRYDLT P ARYVA +    +             N     GRFR
Sbjct: 109 SKLIYDLQDQGGEICSLRYDLTVPFARYVAMHGIRSIKRYHIA-RVYRRDNPVMTKGRFR 167

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D  G          C+M+   +    +K  ++ I +N+RK+LD I    G+  
Sbjct: 168 EFYQCDFDIAGEYDLMVPDAECVMLMCEILE-SVKVGNFVIKLNHRKLLDAIFAICGVPA 226

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D    +   +  A+DKLDK   + V+  + E              L  E  D +  F+ +
Sbjct: 227 D----KFRTICSAVDKLDKMSWELVRKEMVEE-----------KGLDGEVADRIEKFVKL 271

Query: 247 DLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +       +     +L  G        ++L V+   +   G   +R+    ++ RGL+YY
Sbjct: 272 NGHPRTLMAQIRAEKLCDGHKDAIATLDQLDVLFTYLEAMGC-LDRVSFDLSLARGLDYY 330

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YEAI+              GSV  GGRYDGLV  +    VP+ GFSIG+ RL   L
Sbjct: 331 TGIIYEAIITESDR---------GSVAAGGRYDGLVGMYGNTEVPSVGFSIGVERLFSIL 381

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +   +            +     D D ++++       L  AGI  E    ++     Q+
Sbjct: 382 EEEAAKKKIKIRQNQTEVYVCQMDRDINITERLKIIAELWKAGINTEYMYRATPQPKKQI 441

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           + A     P+ ++ G  E     + +K++A  ++   E                   S+L
Sbjct: 442 EAASDAQVPVMVLIGKTELETNSVAVKNMATKQQEVVE------------------RSQL 483

Query: 482 VSTVKKILQE 491
           V+ V++IL+ 
Sbjct: 484 VAKVQEILKS 493


>gi|83764630|dbj|BAE54774.1| unnamed protein product [Aspergillus oryzae]
          Length = 522

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 121/535 (22%), Positives = 211/535 (39%), Gaps = 71/535 (13%)

Query: 1   MGK-KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           MGK K     + P+G  D    +  +R+RI  +I ++++ +G   ++TP+ E  + L   
Sbjct: 1   MGKEKNNFNLKTPKGTKDWSGSDALLRDRIFTTIADVFKRHGGTALDTPVFELREILAGK 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                   
Sbjct: 61  YGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRSMKRYHIAKVYRRDQPA 117

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR R+F QCD D  G+          + +   +      +  Y I IN+RKILDG+ 
Sbjct: 118 VSKGRMREFYQCDFDVAGTFDPMVPDAEVLKIVTEVFEELGWQGRYSIKINHRKILDGVF 177

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E  G+  D    +   +  A+DKLDK     V+  + E              L     D 
Sbjct: 178 EVCGVPAD----KIRPISSAVDKLDKMPWADVRKEMVEE-----------KGLDGAVADK 222

Query: 240 MVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           + +++     + + E     E +    + + G  ++ ++ + +   G   +RI    ++ 
Sbjct: 223 IETYVVKKGTRDLLETLLKDEALLANASAKAGLEDMGLLMDYLEAFGVL-DRISFDMSLA 281

Query: 297 RGLEYYTGCVYEAIL-----------------------------GFPVMNEKQKPVVFGS 327
           RGL+YYTG +YE +                                         +  GS
Sbjct: 282 RGLDYYTGVIYEVVTEGSAPAVSSSAPEAEKLQKSGKKSKSKGNADDDDRSNDPTLGVGS 341

Query: 328 VGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVA----LKSLESSTNNIKEMGPVLITT 382
           V  GGRYD LV  F     +P  G S G+ R+       L+  +S+           +  
Sbjct: 342 VAAGGRYDNLVGMFLPKAQIPCVGVSFGVDRIFSITKARLEREKSAEALRSSEVDAFVMA 401

Query: 383 MDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
                    L +     Q L  AG++AE           Q K A++   P A+I G  E 
Sbjct: 402 FGGKGFTGMLKERMNVCQTLWNAGVKAEFSYKVKPKLPQQFKAAEQGGVPFAVILGEDEL 461

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           + G ++IK++         +++    +E     + + ++ L + VK  +   +++
Sbjct: 462 AEGKVRIKEM--------GLEDGHPEKEG----VLVDLASLPAEVKARVARKRDQ 504


>gi|298491438|ref|YP_003721615.1| histidyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298233356|gb|ADI64492.1| histidyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 462

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 143/490 (29%), Positives = 219/490 (44%), Gaps = 50/490 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+    P GF +    E R+   +LD IR ++E+YGF PIETP +E  + L    
Sbjct: 1   MAKSDKINFSTPSGFPEFLPSEKRLEVYLLDIIRRVFESYGFTPIETPAVERLEVLQAKG 60

Query: 61  PDEDRPNKGVFSL-----------QDDDGQWI----SLRYDLTAPLARYVAENFDTIVFP 105
              D     ++ +           +D  G+      +L++D T P A Y+A + + + FP
Sbjct: 61  NQGDNI---IYGIDPILPPNRQAEKDKSGETALEARALKFDQTVPFAAYIARHLNELTFP 117

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
              Y++  VFR E+   GRFRQF QCD+D V     +   +  M    T     I   D+
Sbjct: 118 FSRYQMDMVFRGERAKDGRFRQFRQCDIDVVARGKLSLLYDAQMPAIITEIFEAINIGDF 177

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I INNRKIL G  + + +      N+    +  ID L+K G   VK  L +        
Sbjct: 178 AIRINNRKILTGFFQSVEVPE----NQIKACIAIIDNLEKIGEAKVKSELEKE------- 226

Query: 226 FTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEK---GFNELVVISELVR 280
                 ++SEQ + ++ F+ ID   +  + +L  L +     E+   G  EL  +   VR
Sbjct: 227 -----GISSEQTEKIIEFIKIDGSVDDVLDKLNHLAQSFPEAEQFNLGVTELATVINGVR 281

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
             G    R  I  +I RGL YYTG VYE  L              GS+  GGRY+ LV  
Sbjct: 282 DLGVADKRFCIDLSIARGLNYYTGTVYETTLIG--------HEALGSICSGGRYEELVGM 333

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           F G+ +P  G SIG++RLI  L  L++   N     P  +  ++   D ++ Y   +Q L
Sbjct: 334 FLGEKMPGVGISIGLTRLISRL--LKAGILNTLSATPTQVVVVNMQEDLIAVYLKVSQQL 391

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R AGI         +  G Q + AD++     +I G  E +     +K+L  G+++   +
Sbjct: 392 RQAGINVVTNF-EKRPLGKQFQAADKQGIQFCVIIGADEAAAQKSSLKNLKSGEQVEVAL 450

Query: 461 KNNESWREAR 470
            +     + R
Sbjct: 451 ADLAEEIKRR 460


>gi|297538111|ref|YP_003673880.1| histidyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257458|gb|ADI29303.1| histidyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 436

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 108/486 (22%), Positives = 190/486 (39%), Gaps = 72/486 (14%)

Query: 1   MGKKTKL-RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  KTK+ + +  +GF D   +   +  ++ D+ R +   YG+  I  PL+E +D   + 
Sbjct: 9   MQTKTKISKFQSIKGFYDILPEATPLWFKLEDTARRVLGQYGYKNIRMPLVESTDLFVRS 68

Query: 60  LPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           + +  D   K +++ +D  +G  ++LR + TA   R V E+  T   P R +  G +FR+
Sbjct: 69  VGEHTDIVEKEMYAWEDALNGDKLTLRPEGTAGCVRAVVESNLTYNGPVRLWYSGAMFRH 128

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGI 169
           E    GR RQF Q  V+  G  +   DAE  +++A     +G            D H  +
Sbjct: 129 ENVQKGRQRQFHQIGVEAFGFDSPQVDAEQIVLLARLWRELGIADVELQINSIGDAHERL 188

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             RK+L    E+     D+            D   +     +++L  +     +      
Sbjct: 189 EYRKVLIAYFEQHADLLDE------------DAKRRLHTNPLRILDTKNPRMQAMC---- 232

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                E    ++  L  +       L +L+            L                 
Sbjct: 233 -----EAAPKLIDSLGDETRAHFDGLCKLLDAAGVAYIVNARL----------------- 270

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                 VRGL+YY   V+E +          K    G++ GGGRYD LV R  G   PA 
Sbjct: 271 ------VRGLDYYNRTVFEWVTT--------KLGAQGTIAGGGRYDALVERLGGDATPAC 316

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF IG+ R+ + ++    + ++  +     +  ++    +        + LR A I+  +
Sbjct: 317 GFGIGLERVFLLMQEYGVTADDAPD-----VYLVNVGEQAEQVAFSIAEQLRNADIQV-I 370

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL---AKGKELSREIKNNESW 466
                 +F +Q+K ADR     A+I G  E +   + +K +    KG++    I+     
Sbjct: 371 LHAGGGSFKSQMKKADRSQAKFALIIGDDEVANKQVTLKPMLATVKGEQQQCSIEQAIEN 430

Query: 467 REARVA 472
             A +A
Sbjct: 431 LTAALA 436


>gi|306836221|ref|ZP_07469205.1| histidine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567942|gb|EFM43523.1| histidine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 429

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 97/478 (20%), Positives = 181/478 (37%), Gaps = 68/478 (14%)

Query: 1   MGKKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M ++ + +A   P+G  D    E     ++  ++       GF  IE P+ E +    + 
Sbjct: 3   MSEEKRFQALSAPKGVPDYYPPESATFYKVRQTMVEQAHLSGFQHIELPIFEDTALFARG 62

Query: 60  LPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRN 117
           + +  D  +K +++  D   + ++LR + TA + R V ++         +    GP FR 
Sbjct: 63  VGESTDVVSKEMYTFADRGERSVTLRPEGTAGVMRSVIQHNLDRGQMPVKLNYSGPFFRY 122

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGI 169
           E+   GR+RQ  Q  V+ +G      DAE+  +   +  A+G            D +   
Sbjct: 123 ERPQAGRYRQLQQVGVEAIGVDDPALDAEVIALADRSYRALGLSGFRLELTSLGDRNCRP 182

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L K+ L  + +    +  LR +D       + +                  
Sbjct: 183 AYREKLQEFLFKLDLDEETRRRAEINPLRVLDDKRPEMQEQLAD---------------- 226

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                    +M+ +L+ +  +    +  ++                              
Sbjct: 227 -------APLMLDYLNAECREHFETVTGMLDD-----------------------MGVAY 256

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   
Sbjct: 257 EINPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLSGI 308

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G+ +G+ R I+AL++   +         V    +   +            LR AGI A+M
Sbjct: 309 GYGLGVDRAILALETEGITLEGSDSRVDVYGIALGTAAKRRMTG--IINDLRKAGIAADM 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
             G  +     +K ADR     A++ G  E   G + +KDLA  ++   E+    +  
Sbjct: 367 SFG-DRGLKGAMKGADRAGARFALVLGDQELENGTVAVKDLAAHEQRDVELSQLVALL 423


>gi|328952294|ref|YP_004369628.1| Histidyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452618|gb|AEB08447.1| Histidyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 422

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 91/468 (19%), Positives = 179/468 (38%), Gaps = 54/468 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            +  RG  D    E    + +    R ++ +YGF  I  PLLE ++   + +    D   
Sbjct: 2   IKAVRGMKDLLPPETARWHYLETVARAVFVSYGFQEIRLPLLERTELFSRSIGASTDIVE 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +++  D  G+ ++LR + TA + R   EN         + + +GP+FR E+   GR+R
Sbjct: 62  KEMYTFLDRRGESMTLRPEATASVVRAFIENRLDQGAEVKKYFTMGPMFRYERPQKGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLH 185
           QF Q + + +G  A   DAE+ +++ +    + +   +  +      +     L ++   
Sbjct: 122 QFHQINCEAIGGEAPELDAELILLLMEIFRRLKVTGLELVVNSLGCPQCRPAYLMELTAL 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               L +        D   +     +++   + +T               Q+  +   L 
Sbjct: 182 FARGLRDL-----CPDCQRRSAANPLRVFDCKSKT---------CQELLAQVPTISDKLC 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + ++    + EL+                              + +  +VRGL+YYT  
Sbjct: 228 DNCQRHEARVLELLD-----------------------RFQVPYRRNPRLVRGLDYYTRT 264

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +          +     +V GGGRY+GL+    G ++PA GF+IG  RL   L   
Sbjct: 265 AFEVVTT--------QLGAQDAVAGGGRYNGLIKDLGGPDLPAIGFAIGQERLATLLSQQ 316

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           ++           L+        +  +     Q LR  G  A++   ++++   Q+  A+
Sbjct: 317 DADLLQQP-----LLFVAVLGEAARDRAFELVQALRHQGYVADLDF-TNRSLKAQMTMAN 370

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           RR     +I G  E + G   +KD+ +G++    +            +
Sbjct: 371 RRGAAWVLILGDQELADGRAPLKDMRRGEQHLVSLDTLPQILADLQPE 418


>gi|226289924|gb|EEH45408.1| histidyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 608

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 125/540 (23%), Positives = 222/540 (41%), Gaps = 81/540 (15%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           MGK+      + P+G  D    +  +R+RI ++I  +++ +G   ++TP+ E  + L   
Sbjct: 68  MGKEKVSFNLKTPKGTKDWFGADGLLRDRIFNAITEVFKRHGATSLDTPVFELREILAGK 127

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N +  +   + Y I  V+R ++
Sbjct: 128 YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPN--IRSIKRYHIAKVYRRDQ 182

Query: 120 H----GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
                G  R       D+          DAE+  +  +  E +G  +  Y I +N+RKIL
Sbjct: 183 PAMSKGRMREFYQCDIDIAGANYDPMVPDAEVLRIATEVFEGLG-WKGSYTIKVNHRKIL 241

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           DG+ E  G+  +    +   +  A+DKLDK     ++  + E              L   
Sbjct: 242 DGLFEVCGVPKE----KIRTISSAVDKLDKLPWADIRKEMVEE-----------KGLDGA 286

Query: 236 QIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             D + +++     + + E     E +    + + G  E+ ++ + +       ++I   
Sbjct: 287 VADKIETYVVRKGGRELLETLQTDEALVANPSAKAGLEEMRLLMDYLEAFDIL-DKISFD 345

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPV----------------------------- 323
            ++ RGL+YYTG +YEAI       E                                  
Sbjct: 346 MSLARGLDYYTGVIYEAITEGSAPAEDPSTGEEAQKSQRESKSKSKNNDDDDDDDNDRSN 405

Query: 324 ----VFGSVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKS-LESSTNNIKEMGP 377
                 GSV  GGRYD LV  F  +  +P  G S G+ R+    K+ +E    ++ ++  
Sbjct: 406 DPSIGVGSVAAGGRYDELVGMFSNRAQIPCVGISFGVDRIFSITKARMERENTHVNKLSE 465

Query: 378 VLITTMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           V +  M          L +     + L  AGI+AE           Q + A+    P A+
Sbjct: 466 VDVYVMAFGGKGFTGLLKERMDVARRLWDAGIKAEFSYKRKPKPQQQFEAAEANAVPFAV 525

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  E + G +++K++  G E     K+           + + +S L   VK +L+  +
Sbjct: 526 IIGEDELANGQVRVKEM--GLEKGHPEKD----------GVLVDLSTLAEEVKALLERKR 573


>gi|68536122|ref|YP_250827.1| histidyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|83305865|sp|Q4JVE8|SYH_CORJK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|68263721|emb|CAI37209.1| hisS [Corynebacterium jeikeium K411]
          Length = 443

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 99/482 (20%), Positives = 185/482 (38%), Gaps = 69/482 (14%)

Query: 5   TKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD- 62
            K +A   P+G  D           + D+  +     G++ +E P+ E +    + + + 
Sbjct: 17  EKFKALSAPKGVPDYVPPTSAEFKAVKDAFTSAAHAAGYEHVELPIFEETSLFARGVGES 76

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
            D  +K +++  D  G+ ++LR + TA + R V E+       P +    GP FR E+  
Sbjct: 77  TDVVSKEMYTFADRGGRSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLVYNGPFFRYERPQ 136

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRK 173
            GR+RQ  Q  V+ +G      DAE+  +      ++G            D+      R+
Sbjct: 137 AGRYRQLQQVGVEAIGVDDPALDAEVIALAHRCFSSIGLNGFRLELTSLGDWDDRPAYRQ 196

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L   L  + L  + +   +L  LR +D       + +                      
Sbjct: 197 KLQDFLATLPLDEETQRRAQLNPLRVLDDKRPEMQEMLAE-------------------- 236

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                +M+  LS    +    +  L+     G                         I+ 
Sbjct: 237 ---APLMLDHLSDSSREHFETVTGLLDDLGVG-----------------------YTINP 270

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   GF +
Sbjct: 271 RMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLSGIGFGL 322

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+ R ++AL++ E   +  +    V +  +   +++  +       LR  G+ A+M  G 
Sbjct: 323 GVDRALLALEAEEKRASTGRR---VDVYGVALGAEAKRRMVGIVDDLRERGVSADMSYG- 378

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           ++     +K ADR     A++ G  E + G + +KDL   ++   ++         + A 
Sbjct: 379 NRGLKGAMKGADRAGALYALVLGDKELAEGTVTVKDLGAHEQHEVDLAAVVELLAEKTAD 438

Query: 474 IT 475
            T
Sbjct: 439 RT 440


>gi|304439601|ref|ZP_07399505.1| histidine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371913|gb|EFM25515.1| histidine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 435

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 132/458 (28%), Positives = 217/458 (47%), Gaps = 35/458 (7%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +     GF +   K+  + N +LD I+  +E YGF PI+TP+LE ++ L      E    
Sbjct: 5   KPSTLPGFMELLPKDQVVFNNLLDIIKKNFERYGFLPIDTPVLEKAEVLLAKGGGE--TE 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K V+         I++R+DLT PLARY  E+F  + FP + Y++G V+R E+   GR+R+
Sbjct: 63  KQVYEFT-KGTTDIAMRFDLTVPLARYTVEHFSDLHFPFKRYQVGKVYRGERAQKGRYRE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD+D +G+   +   +                  + I INNRKIL+G  + + +   
Sbjct: 122 FYQCDIDIIGNGKISLVNDAECPAVIYSIFREFDFGKFTIHINNRKILNGFFKSLEVKSS 181

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +++      +R +DKLDK G+  VK  L +              ++SE I+ ++SF+ ID
Sbjct: 182 EEV------MRIVDKLDKIGVDNVKEELDKI------------GMSSENIEKLISFIGID 223

Query: 248 LEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             K   +  L +L       ++G  EL  + + +R  G + +   I   I RGL+YYTG 
Sbjct: 224 GTKEEILDALKKLNCDNEDFKQGVEELEAVVKYMRAYGVDDDYFNIDLKIARGLDYYTGT 283

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           VYE  L              GSV  GGRYD L   +    +P  G SIG++RL   ++ L
Sbjct: 284 VYETFL--------DDHRELGSVSSGGRYDNLAGYYTTNLMPGVGMSIGLTRLFSKMQEL 335

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +       ++  ++I  M     ++ K       L+ AGI   ++  S K  G + KYAD
Sbjct: 336 DLIKKKGNKVSDIIIIPM---ESTIEKSIEILAKLQKAGISTTIYTESGK-MGKKFKYAD 391

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             +   A++ G  E    +  +K++  G +    +++ 
Sbjct: 392 ALDIKYALVIGENELESNVFGLKNMETGDQEELSLEDI 429


>gi|242398072|ref|YP_002993496.1| Histidyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264465|gb|ACS89147.1| Histidyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 437

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 136/483 (28%), Positives = 224/483 (46%), Gaps = 52/483 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +  +G  D   +++  R  + + IR ++E YGF  I TP  EY+        +E    
Sbjct: 6   RIQRVKGTRDLLPEDMIKRRYVFERIREVFEVYGFKEILTPTFEYTKLFELRSGEE--VV 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + +++ +D  G+ +SLR DLT+ +AR     F T   P + Y I  +FR E+   GR R+
Sbjct: 64  EQLYAFEDKGGRNLSLRPDLTSSVARLFVNAFQTAPKPIKWYYITNMFRYEEPQSGRLRE 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+ +GSS   ADAE+  ++ ++  + G+K  ++ + + +R +LD   + IG+  D
Sbjct: 124 FWQAGVELIGSSNIEADAEVIALLIESYLSTGLK--EFTVNVGDRILLDEFAKMIGVKDD 181

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                 + ++R IDK DK         L E              L  E I+ + + + + 
Sbjct: 182 ------IGLMRLIDKKDKMERGEFVKALQEF------------GLNEEDINKVFTLIELK 223

Query: 248 LE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            +   +      +  +   ++   ++  + EL++  G   +   I   I RG +YYT  V
Sbjct: 224 GKPDDVLPKARELFTSEIAKEELKKIEELFELLKAYGI-KDYALIDFGIARGFDYYTSIV 282

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EAI            +  GS+GGGGRYD L+  F G+  PATGF+IGI RLI  L+S E
Sbjct: 283 FEAI--------ADNDLGIGSIGGGGRYDNLIEVFGGKPTPATGFAIGIERLIPILESKE 334

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                 K    V +  + ++ +   K    TQ LR A I+AE  +   +  G  L YA+ 
Sbjct: 335 LLP-EFKVGSDVFVAYIGNELEIKKKAIEVTQTLRKANIKAEYDI-QGRKLGKALDYANS 392

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
               +AII G  + S G + I+D+  G++                    + I  +V  VK
Sbjct: 393 IEVKVAIILGRRDLSEGKVTIRDMKSGEQK------------------QVAIESIVEEVK 434

Query: 487 KIL 489
           K+L
Sbjct: 435 KLL 437


>gi|300173446|ref|YP_003772612.1| histidyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887825|emb|CBL91793.1| histidyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 432

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 182/468 (38%), Gaps = 55/468 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T    + P+G AD           +  + R ++ +Y F  I TPL E  D   +  
Sbjct: 1   MAKPT---FQRPKGTADLLPDNTLQWQHVESTARLLFGDYNFKEIRTPLFENFDVFSRSA 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFR 116
            D  D   K ++   D   + I+LR + TA + R   EN         P + Y +GP+FR
Sbjct: 58  GDTSDVVTKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLFGPEFDKPYKVYYMGPMFR 117

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY-HIGINNRKIL 175
            E+   GRFRQF Q  V+  GS +   D E+  M  D  + +G+K        + ++   
Sbjct: 118 YERPQAGRFRQFHQIGVEAFGSKSPALDVEIIAMAVDLFQTLGLKNLKVAINTLGDKSSR 177

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
               + +  +     NE      + D  ++     +++L  +   D              
Sbjct: 178 VAYRQALIDYLKPHFNEL-----STDSQNRLEQNPLRVLDSKDPRDKIF---------VA 223

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++ +LS +  K   ++  +++                         +    I +T+
Sbjct: 224 DAPSILDYLSEEATKHWQQVQTMLRAL-----------------------NINYDIDATM 260

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   ++E +     +          ++ GGGRY GLV+ F G   P  GF IG+
Sbjct: 261 VRGLDYYNDTIFEIMTIDDNLKGAA------TIAGGGRYSGLVAEFGGPETPGVGFGIGM 314

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RLI  L +  S+     ++   ++   D             Q +R+ G  AE      +
Sbjct: 315 ERLIGLLNAQNSAPIVDDKLDFYVVNIGDGTDVV---AMQTVQAIRSFGYVAERDY-LGR 370

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +   Q K ADR +    +  G  E       +KD+A G + + ++ + 
Sbjct: 371 SAKAQFKSADRNHSKYVVTIGDQELVNNTANVKDMATGYQQTVKLADL 418


>gi|71993693|ref|NP_001023374.1| Histidyl tRNA Synthetase family member (hrs-1) [Caenorhabditis
           elegans]
 gi|55584143|sp|P34183|SYH_CAEEL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|30145709|emb|CAD89746.1| C. elegans protein T11G6.1b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 521

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 138/501 (27%), Positives = 230/501 (45%), Gaps = 48/501 (9%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLP 61
           K  K   +  +G  D    +  +RN +L ++   +  YG + I+TP+ E  D L GK+  
Sbjct: 56  KPGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGE 115

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH- 120
           +     K V+ LQD  G+ +SLRYDLT P ARY+A N    +     Y+I  V+R ++  
Sbjct: 116 EG---GKLVYDLQDQGGELLSLRYDLTVPFARYLAMNK---ITNITRYQIAKVYRRDQPV 169

Query: 121 -GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F QCD D  G          C+ + D L    ++  ++ I +N+R IL+G+ 
Sbjct: 170 MSRGRYREFYQCDFDIAGQYDLMLPEAECLGIVDELLT-KLEIGEFFINLNHRLILEGMF 228

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+   D       +  ++DKLDK   + V+  +   +     + T          ++
Sbjct: 229 AVSGIPAKD----FKTICSSVDKLDKTPWEDVEQEMINEKFLT-KEQTGKLGELVRFREL 283

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                +++L + M +L + +      +KG  EL V+ E +   G  + R + S  + RGL
Sbjct: 284 NSDLNNLELLEKMSQLPD-LGQNDKFKKGAEELKVLIEYLNVDGVTTVRYEPS--LARGL 340

Query: 300 EYYTGCVYEAILG--------FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-NVPATG 350
           +YYTG +YEA+              +   +PV  GSV  GGRYDGLV  F  + NVP  G
Sbjct: 341 DYYTGAIYEAVAPKALEGTAVENSEDTAGQPVGVGSVAAGGRYDGLVKMFDSKANVPCCG 400

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            S GI RL   +++ +             +       + +   +   +MLR+AGI+ EM 
Sbjct: 401 VSFGIERLFAIMEARQKVAI---RTTQTEVYVASAQKNLVRDRKKLVKMLRSAGIKTEMA 457

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           L ++     Q +YA+ R  PLAI+ G  E   G+++++++    E               
Sbjct: 458 LKANPKLLTQFQYAEERRIPLAIVIGEQELKDGVVKLRNVVTRDE--------------- 502

Query: 471 VAQITIPISELVSTVKKILQE 491
               TI + +L++ V+  L  
Sbjct: 503 ---QTIKLDQLITAVRDTLAA 520


>gi|301154679|emb|CBW14142.1| histidyl tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 423

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 104/490 (21%), Positives = 191/490 (38%), Gaps = 72/490 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +R I  +YG+  +  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDCSPTESPLWQWIEGQVRQILSSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ ++ A   +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEVFGIATPEIDAELIILTARLWKALGI---DQHVSLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E    L + ++ ++     +++L  + +               +    
Sbjct: 173 RANYRSALVAFLENHQDLMSEEEKERLVKNPLRILDTKNQALQD---------VLDGAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +  +   +L  L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDDESREHFAQLCGLLDA-----------------------VGIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G    + GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATSSVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     +I     V I  +     +        + LR+    +   M   S  NF
Sbjct: 313 LLVQEVNK---SIPVKSAVDIYVVYQGEGTTLAAFQLAEKLRSELPHLST-MLHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q K AD+    LA++ G  E     + +K L                      Q TI 
Sbjct: 369 KKQFKRADKSGATLALVLGESEVQNNQVVVKHL-----------------LGAAEQQTID 411

Query: 478 ISELVSTVKK 487
           ++ L+  VK 
Sbjct: 412 VANLIEHVKA 421


>gi|327348775|gb|EGE77632.1| histidyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 598

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 120/532 (22%), Positives = 211/532 (39%), Gaps = 71/532 (13%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           MGK+      + P+G  D    +  +R+RI  +I  +++ +G   ++TP+ E  D L   
Sbjct: 68  MGKEKVSFNLKTPKGTKDWFGSDGLLRDRIFSTITEVFKRHGATSLDTPVFELRDILAGK 127

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N +                   
Sbjct: 128 YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPNVRNIKRYHIAKVYRRDQPA 184

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAE--MCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
              GR R+F QCD+D  G++ +    +  +  +  +  E +G  +  Y I IN+RKILDG
Sbjct: 185 MSKGRMREFYQCDIDFAGANYDPMVPDAEILRIATEVFEELG-WKGRYTIKINHRKILDG 243

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           + E  G+  +    +   +  A+DKLDK     V+  + E              L S   
Sbjct: 244 LFEVCGVPKE----KIRTISSAVDKLDKMPWADVRREMVEE-----------KGLDSAVA 288

Query: 238 DIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           D + +++     + + E     E +   ++ + G  E+ ++ + +       ++I    +
Sbjct: 289 DKIETYVVQKGGRELVESLLSDEALLANLSAKTGLEEMALLMDYLEAFDIL-DKISFDMS 347

Query: 295 IVRGLEYYTGCVYEAILGFPVMN----------------------------EKQKPVVFG 326
           + RGL+YYTG +YE +                                        +  G
Sbjct: 348 LARGLDYYTGVIYEVVTEGSAPPAAPSAGEEAQKIQKKSKGKAKNDDDDDRSNDPSIGVG 407

Query: 327 SVGGGGRYDGLVSRFK-GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
           S+  GGRYD LV  F     +P  G S G+ R+    K+     N   ++  V +  M  
Sbjct: 408 SIAAGGRYDELVGMFSSRAQIPCVGISFGVDRIFSITKARMGENNRPNKLCDVDVYVMAF 467

Query: 386 DSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
                   L +     + L  AG++ E           Q   A+    P A+I G  E +
Sbjct: 468 GGKGFTGLLKERMEVARSLWDAGLKVEFSYKRKPKPIQQFDAAEANAVPFAVILGEDELA 527

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            G +++K++                       + + +S L   VK+ L+  K
Sbjct: 528 AGQVRVKEM------------GLDKGHPEKDGVLVNLSTLAEEVKERLERKK 567


>gi|253733118|ref|ZP_04867283.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253728874|gb|EES97603.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 420

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 95/464 (20%), Positives = 182/464 (39%), Gaps = 50/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++ +    I + +  +   Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K     I    +        E +  
Sbjct: 122 RQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +  ++E        D   +     +++L  +   D     T            +  FL
Sbjct: 182 HFEPVIHEF-----CSDCQSRLHTNPMRILDCKVDRDKEAIKT---------APRITDFL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + +    ++   +                                   +VRGL+YYT 
Sbjct: 228 NEESKAYYEQVKAYLDDL-----------------------DIPYIEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++AL+ 
Sbjct: 265 TAFELMMDNPNYD-----GAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEE 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +  + +   ++T  D               LR  GI+A+      +    Q+K A
Sbjct: 320 EGIELDIEENLDLFIVTIGDQAD---RYAVKLLNHLRHNGIKADKDY-LQRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           DR      I+ G  E     + +K++  G+  + E+     + +
Sbjct: 376 DRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFK 419


>gi|314933795|ref|ZP_07841160.1| histidine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653945|gb|EFS17702.1| histidine--tRNA ligase [Staphylococcus caprae C87]
          Length = 420

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 93/464 (20%), Positives = 186/464 (40%), Gaps = 50/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++      I + +  + E Y +  I TP+ E ++   + + D  D   
Sbjct: 2   IKIPRGTQDILPEDSIKWRHIENKLDELMELYNYKEIRTPIFESTELFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + ++LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSLTLRPEGTAAVVRSYIEHKMQGNPNQPVKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    E+ G+K     I  I + +      E +  
Sbjct: 122 RQFNQFGVEAIGAENPSIDAEVLAMVMHIYESFGLKHLKLVINSIGDSESRKEYNEALVN 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +      +I     D   +     +++L  +   D     T            +  +L
Sbjct: 182 HFE-----PVIDTFCSDCQSRLHTNPMRILDCKIDRDKEAIKT---------APRITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + D +    ++   +                          +        +VRGL+YYT 
Sbjct: 228 NDDSKAYYEQVKHHLDDL-----------------------NIPYVEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++AL+ 
Sbjct: 265 TAFELMMDNPNYD-----GAITTLCGGGRYNGLLQLLDGPSETGIGFALSIERLLLALEE 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +  ++     +  +    ++          LR   ++A+     ++    Q+K A
Sbjct: 320 EGIELDIEEKFD---LFIVTMGEEADRYAVKLLNDLRKNDVKADKDY-LNRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           DR N    I+ G  E     + IK++  G+  + ++    ++ +
Sbjct: 376 DRLNAKYTIVIGDQELENNSIAIKNMTTGESENIQLDQLINYFK 419


>gi|322701769|gb|EFY93517.1| histidyl-tRNA synthetase precursor [Metarhizium acridum CQMa 102]
          Length = 532

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 125/507 (24%), Positives = 220/507 (43%), Gaps = 53/507 (10%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   +  + P+G  D   +++ +R  +   I ++++ +G  P++TP+ E  + L     +
Sbjct: 58  KAPAVTLKTPKGTRDWSGQDMLLREEVFKMITDVFKKHGGTPLDTPVFELKEILAGKYGE 117

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH-- 120
           +   +K ++ LQD  G+  SLRYDLT P AR++A N    +   + Y I  V+R ++   
Sbjct: 118 D---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNN---IQAVKRYHIAKVYRRDQPAI 171

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F QCD D  G           + +   +E     +    I +N+R++LDG+  
Sbjct: 172 ARGRYREFHQCDFDIAGVYDPMIPDAEVLRII--VEVFEALQLGVTIKLNHRQVLDGMFA 229

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  +    +   +  A+DKLDK   + VK  + E              L +E  D +
Sbjct: 230 VAGVTPE----KIRTISSAVDKLDKMSWEDVKKEMVEE-----------KGLANEVADRI 274

Query: 241 VSFLSIDLEKS----MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++      S    + +  E +      ++G +++ +++  V   G  +++I    ++ 
Sbjct: 275 GEYVRHAGTISETLKLLKSREELVANEQVKRGLDDMTLLASYVEAFGI-ADKISFDLSLA 333

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPV----------VFGSVGGGGRYDGLVSRFKGQNV 346
           RGL+YYTG +YE I   P   E Q               GS+  GGRYD LV  +  + +
Sbjct: 334 RGLDYYTGLIYEVINLPPKAEEGQGSGKKSKKDDPASQVGSIAAGGRYDNLVGMYGKRQI 393

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS----LSKYQMYTQMLRT 402
           P  G S G+ R+   L++        +    V +  M     S    L +     Q L +
Sbjct: 394 PCVGISFGVDRIFTILEARRRKDGIKQRRD-VDVYVMAFGDKSSNGLLLERMSVAQRLWS 452

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE           Q K A+    PL +I G  E   G +++K L +G+        
Sbjct: 453 AGIRAEFSPKVKPKLPQQFKAAE--GVPLGVILGQTELDAGQVRVKVLGQGENKE----- 505

Query: 463 NESWREARVAQITIPISELVSTVKKIL 489
            +     +     + + +L   VKK+L
Sbjct: 506 -DDKPAEKDNGKLVSLEQLADEVKKLL 531


>gi|255292047|dbj|BAH90528.1| histidyl-tRNA synthetase [uncultured bacterium]
 gi|255292515|dbj|BAH89630.1| histidyl-tRNA synthetase [uncultured bacterium]
 gi|255293029|dbj|BAH90124.1| histidyl-tRNA synthetase [uncultured bacterium]
          Length = 428

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 105/483 (21%), Positives = 185/483 (38%), Gaps = 66/483 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D         + +   +R I E +GF  +  PLLE ++   + + +  D  
Sbjct: 4   KLQAVRGMNDLLPAVTPRWHAVEQRLRVILERHGFAEVRLPLLEPTELFARTIGEVTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  ++LR + TA   R   E+        R +  GP+FR+E+   GR+R
Sbjct: 64  EKEMYTFLDRNGDSLTLRPEGTAGAVRAGIEHGLFQGQLLRWWYQGPMFRHERPQRGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   +  GS+A   DAE+  M A    A+G+      +         G  E    + 
Sbjct: 124 QFHQIGAECFGSAAPELDAELIAMTAQFWGALGLSGLRLELNSL------GSREARAAYR 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +   +        +D+  +  L    L + + +         GA         +   L  
Sbjct: 178 ERLQDYLRGHFDLLDEDSRRRLDSNPLRILDSKNPALAQLIAGA-------PSLPDHLDA 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +  +    L EL++G                             ++  +VRGL+YY   V
Sbjct: 231 ESREHFGRLCELLEGLGVA-----------------------YTVNPRLVRGLDYYGRTV 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +               G+V  GGRYD LV +  G+  PA GF++G+ RLI  L    
Sbjct: 268 FEWVT--------DALGAQGTVCAGGRYDALVEQLGGRPTPAIGFALGLERLIELLAVSG 319

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYAD 425
                   +  V+ T         ++     Q LR  A     +   +  +FG Q++ AD
Sbjct: 320 LDPVVPHRIWYVVSTPGP----CRAQALGLAQSLRAGAQAPTVLVDHAGGSFGKQMQRAD 375

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           +    +A+I G  E + G + ++ L   +                  Q  +P+  +V+TV
Sbjct: 376 KAGADVALILGEEELAEGSVTVRLLRASE----------------PTQQRVPLDAVVATV 419

Query: 486 KKI 488
            ++
Sbjct: 420 ARL 422


>gi|239997028|ref|ZP_04717552.1| histidyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 427

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 107/494 (21%), Positives = 188/494 (38%), Gaps = 69/494 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC  +      ++   +R +  +YG+  I TP++E +D   + +
Sbjct: 1   MAK----TIQAIRGMNDCLPEISGTWQKVESVLRQVVASYGYQEIRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASCVRAGNEHGLLYNQQQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      D E+ ++ A   +A G     +     N    +   
Sbjct: 117 PQKGRYRQFHQFGVETYGMDGPDIDLEVILLSARFWKAFG--IEQHVKLQINTLGSNEAR 174

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                   + L +R   L   D L +     +++L  +    +       A    + +D 
Sbjct: 175 AAYRDTLVEFLKQRADQLD-EDSLRRLETNPLRVLDSK--NPDVQAAIADAPALIDHLD- 230

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                                     E+       +   + ++G      +I+  +VRGL
Sbjct: 231 --------------------------EESKVHFETLCSRLTQAG---IEFEINPRLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++GI RL+
Sbjct: 262 DYYNRTVFEWVT--------DSLGAQGTVCAGGRYDGLVEQLGGKATPAVGFAMGIERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EMFLGSSKNFG 418
           +    L + T   ++     +       ++        + LR        M      NF 
Sbjct: 314 L---LLTTLTEEGQDSSFADVYVTAMGEEAQPYAIEVAEHLRNTLPNTRIMMHCGGGNFK 370

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            QLK AD+    LA++ G  E     + +K L  G+E                 Q+T+  
Sbjct: 371 KQLKRADKTGARLALLLGNDEMQSREVGVKPLRDGQE-----------------QVTVSF 413

Query: 479 SELVSTVKKILQEN 492
             L   V ++L   
Sbjct: 414 DALSDKVAEMLSAK 427


>gi|111023856|ref|YP_706828.1| histidyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123045389|sp|Q0S1B6|SYH_RHOSR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|110823386|gb|ABG98670.1| histidine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 423

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 99/475 (20%), Positives = 181/475 (38%), Gaps = 70/475 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K +      P+G  D    +      + D +       G+  IE P+ E +    + +
Sbjct: 1   MSKAS--TFSAPKGVPDYVPPQSSEFVAVRDGLTRAARLAGYGHIELPIFEDTGLFARGV 58

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 59  GESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHGLDRGQLPVKLSYAGPFFRYE 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +       +G            D      
Sbjct: 119 RPQAGRYRQLQQVGVEAIGVDDPALDAEVIAIADAGFRGLGLDGFRLEITSLGDDTCRPQ 178

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   L  + L  + +    +  LR +D       + V+ +  +             
Sbjct: 179 YRERLQEFLFALPLDEETRRRAEINPLRVLDDK----RKEVREMTAD------------- 221

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   +M+  LS   +    E+   +                          S    
Sbjct: 222 ------APLMLDHLSDTAKAHFDEVLAHLDAL-----------------------SVPYV 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +   G
Sbjct: 253 VNPRMVRGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQPLSGIG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F +G+ R ++AL +   +  +        +  +    ++ +K  +  Q LR  GIR ++ 
Sbjct: 305 FGLGVDRTVLALAAEGKTAGSTARCE---VFGVPLGEEAKAKLVVIAQQLRAQGIRVDLA 361

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            G ++     +K ADR    LA++ G  + + G + IK+LA G + S    +  +
Sbjct: 362 YG-NRGVKGAMKAADRSGAALALVLGDRDIADGTVGIKNLATGDQESVSSADVVA 415


>gi|144897743|emb|CAM74607.1| Histidyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 411

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 100/466 (21%), Positives = 171/466 (36%), Gaps = 74/466 (15%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D   ++ R    + ++   + + YG+  I TP+ E+++   + L +  D   
Sbjct: 4   LQPVRGTHDLLPEDSRRHRFVEETAFGVAKRYGYGEIVTPIFEFTEVFSRTLGETSDVVT 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++  D  G  I+LR + TA +AR       T   P +    GP+FR+E+   GR RQ
Sbjct: 64  KEMYTFADRSGDSITLRPEGTAGVARAFISGGLTQSLPLKVMYRGPMFRHERPQKGRLRQ 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGI 178
           F Q   + +G     AD E+  M    L A+G             D       R  L   
Sbjct: 124 FHQVGCELLGVDGPQADIEVISMAWRILAALGLSDKVQLEINTLGDAESRAAYRAALIAY 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           LE + L   ++   RL                +++L  +   D                 
Sbjct: 184 LEPLRLSLSEESQARLQ------------KNPLRVLDSKDEEDK---------RVVADAP 222

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +M   L+   +    ++   +                               ++  +VRG
Sbjct: 223 LMGDSLTPAAKDFFDQVTAGLTAL-----------------------GIPFVVNPKLVRG 259

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY    +E                 G+V  GGRYDGL+ +  G   P  G++ GI RL
Sbjct: 260 LDYYCHTAFEFTTTA--------LGAQGTVLAGGRYDGLIGQMGGPATPGIGWAAGIERL 311

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + ++ L              I+ +           +    LR AG+  +M  G S N  
Sbjct: 312 SMLVQDLPELDRP--------ISIIPMGDTL--PALVLADRLRAAGLSVDM--GFSGNMK 359

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            ++  A++ N   A+I G  E +RG + ++DL  G +    +   E
Sbjct: 360 KRMARANKANARFAVILGEDELARGAVTLRDLDAGTQDEIPLDQVE 405


>gi|237807663|ref|YP_002892103.1| histidyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511491|sp|C4LC38|SYH_TOLAT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|237499924|gb|ACQ92517.1| histidyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 425

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 100/467 (21%), Positives = 181/467 (38%), Gaps = 55/467 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC  ++  +   +  ++R +  +YG+  I  P++E ++   + +
Sbjct: 1   MAKQ----IQAIRGMNDCLPEQTPVWQMVEATLRRVVSSYGYSEIRMPVVEMTNLFQRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFNDRNGDSLTLRPEGTAGCVRACIEHGLVYNQERRLWYVGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ MM A     +GI +                L
Sbjct: 117 PQKGRYRQFHQFGVEVFGLTGPDIDAELIMMTARLWRELGIAQFTTLQ-----------L 165

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +G   +       +V       +    +  + +                    +    
Sbjct: 166 NTLGSSAERAAYRDALVTFLEQHKESLDEESQRRMYSNPLR-VLDTKNPQVQEILQHAPT 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           M  +   + +     L  L+       +    L                       VRGL
Sbjct: 225 MADYFGEETKAHFSGLKALLDAAGIAYQVNERL-----------------------VRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G++ GGGRYDGLV +  GQ  PA GF++G+ RL 
Sbjct: 262 DYYNYTVFEWVT--------DSLGAQGTICGGGRYDGLVEQLGGQATPAIGFAMGLERLT 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + L++LE   N       V +        +L+   +  + LR+    +R     G   NF
Sbjct: 314 LMLETLEQIRNIPST---VDVYICMAGEGTLTAGLLLAEKLRSERPQLRVMTHCGGG-NF 369

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNN 463
             Q+K AD+    +A+I G  E +   + +K L    ++ + ++   
Sbjct: 370 KKQMKRADKVEARIALILGETEVAEQKVTVKFLRDQVEQQTVDVTAL 416


>gi|153955741|ref|YP_001396506.1| histidyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856110|ref|YP_002473232.1| hypothetical protein CKR_2767 [Clostridium kluyveri NBRC 12016]
 gi|189082288|sp|A5N1Y9|SYH_CLOK5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|254782325|sp|B9E5P3|SYH_CLOK1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|146348599|gb|EDK35135.1| HisS [Clostridium kluyveri DSM 555]
 gi|219569834|dbj|BAH07818.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 416

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 99/463 (21%), Positives = 184/463 (39%), Gaps = 62/463 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    E    + + D  +NI ++YG+  I TP+ EY++   + + +  D 
Sbjct: 1   MAIQAPKGTKDILPTESYKWHYLEDKFKNIADSYGYREIRTPVFEYTELFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ ++L+ + T+P  R   E +      P + +   PV R E    GR
Sbjct: 61  VQKEMYTFLDRAGRSLTLKPEGTSPAVRAFVEGSLYNEAQPTKLFYFTPVLRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILE 180
            R+  Q  ++  GS   + DAE+  +     E +G+       +       RK  + IL+
Sbjct: 121 LREHHQFGIEAFGSREASLDAEVISLAMRIYEELGVDGIELNINSIGCSKCRKEYNDILK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  D + +            +F    +++L  + +  +  +  K A L       M
Sbjct: 181 TFLSKQYDNICDTC--------KTRFHKNPMRIL--DCKEKSCREIVKDAPL-------M 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L  +  +    L   ++G   G                        KI+  IVRGL+
Sbjct: 224 LHHLCDECREHFESLKMYLEGLGIG-----------------------YKINPLIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+  V+E I                ++ GGGRYD L+    G  +PA GF +GI R ++
Sbjct: 261 YYSKTVFEIINKN------------ITICGGGRYDYLIEEVGGPKMPAVGFGMGIERTLL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L         I ++  + +        +  K    T  LR   +R E     +++   +
Sbjct: 309 TLSENGI---EIPKLPYIDLYIGIIGDKARIKALTLTNKLREKNVRCEYDH-MNRSVKAE 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +KYA++ N    +I G  E   G+ + K +  G++    + + 
Sbjct: 365 MKYANKINARFTVILGENEIESGIAKFKRMEDGQQFEISLGDL 407


>gi|325269097|ref|ZP_08135718.1| histidine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324988718|gb|EGC20680.1| histidine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 455

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 140/479 (29%), Positives = 216/479 (45%), Gaps = 57/479 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+  RN I D+IR +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFCPEEMAKRNYIFDTIRRVYALYGFQQIETPAMETLHTLMGKYGEEGDKL 63

Query: 65  ---RPNKGVFSLQDDDGQWI---------------SLRYDLTAPLARYVAENFDTIVFPC 106
                N G + L+      +                LRYDLT P ARYV  + + +  P 
Sbjct: 64  LFKILNSGDY-LKSVSDDELKERNTLKMQTRLCEKGLRYDLTVPFARYVVMHREELQLPF 122

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++      +G+      
Sbjct: 123 KRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIIDTVFTELGV---RVQ 179

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I INNRKIL GI E +G          + +  AIDKLDK GL+ V   L E         
Sbjct: 180 IKINNRKILTGIAEVMGEKDK-----IVDITVAIDKLDKIGLENVNAELREN-------- 226

Query: 227 TKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                ++ E I  +   + ++   E  +  + +++  +  G KG  E   I ++++ SG 
Sbjct: 227 ----GISEEAIRKLQPIIRLEGTNEDKLEVIAKVLADSETGLKGVEETRFILDMLKTSG- 281

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
             N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F   
Sbjct: 282 LKNEIQLDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGIFGMP 332

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +   G S G  R+   L +L+       +   +L           +         R AG
Sbjct: 333 GLSGVGISFGADRIYDVLNTLDLYPKESVQGTQLLFINFGEKET--AYCMPVVAAARRAG 390

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           IR EM+   +K    Q+ YA+ +N     + G  E   G + +K++A GK+ S   +  
Sbjct: 391 IRTEMYPDKAK-MKKQMSYANAKNINFVALTGESEMEAGKITLKNMATGKQQSMTSEEL 448


>gi|121998567|ref|YP_001003354.1| histidyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|189082299|sp|A1WXZ0|SYH_HALHL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|121589972|gb|ABM62552.1| histidyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 423

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 109/496 (21%), Positives = 195/496 (39%), Gaps = 82/496 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K     +  RGF+D   +E  +      +IR + E+YG+  I  P+LE ++   + +
Sbjct: 1   MSNKG---IQSIRGFSDILPEESPLWQYAESAIRRVLESYGYREIRLPVLERTELFSRSI 57

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   ++        R +  GP+FR+E+
Sbjct: 58  GEVTDIVEKEMYTFDDRNGDSVTLRPEGTAGCVRAGIQSGLLHNAEPRLWYAGPMFRHER 117

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKIL 175
              GR RQF Q   +  G      DAEM +M A  L  +G+     + +      +R   
Sbjct: 118 PQKGRLRQFHQVGAEVFGIPEPELDAEMIIMTARMLRELGLSDVRLQLNSLGTPESRAAH 177

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
              L       +D+L          D+  +  L+   L + + +          A     
Sbjct: 178 REQLVAYLRRHEDRL----------DEDARRRLETNPLRIFDSKNPQVQQVMADA----- 222

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++  L     +    +  L++                             +++ ++
Sbjct: 223 --PRLMDCLDSVSAEHFTVVRNLLE-----------------------RAGVEYEVNPSL 257

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YYT  V+E +          +    G+V  GGR+DGLV +  G+  PA GF++G+
Sbjct: 258 VRGLDYYTRTVFEWVT--------DRLGAQGTVCAGGRFDGLVEQLGGRPTPAIGFALGL 309

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGS 413
            RL+  L+   +          +++      +          + LR A   +R +M  G 
Sbjct: 310 ERLVALLEDQGTPGQGGAPHAYLVV------ATEAGAGLEMAEALRDALPALRVQMHAGG 363

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              F  QLK ADR    +A+I G  E++ G L IKDL                      Q
Sbjct: 364 GG-FKAQLKRADRSGARVALILGDDEQAAGALTIKDLR-----------------GEDGQ 405

Query: 474 ITIPISELVSTVKKIL 489
             +P+ + V+ ++ ++
Sbjct: 406 QRLPLDDAVTYLRGLI 421


>gi|19552859|ref|NP_600861.1| histidyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390530|ref|YP_225932.1| histidyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|32130116|sp|Q8NQ07|SYH_CORGL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|21324416|dbj|BAB99040.1| Histidyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325868|emb|CAF20031.1| HISTIDYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 429

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 99/480 (20%), Positives = 181/480 (37%), Gaps = 69/480 (14%)

Query: 2   GKKTKLR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
            K  KL+    P+G  D    +      + D+  N     GF+ IE P+ E +    + +
Sbjct: 6   SKSEKLQSFAAPKGVPDYAPPKSAAFLAVRDAFVNQAHKAGFEHIELPIFEDTGLFARGV 65

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 66  GESTDVVSKEMYTFADRGERSVTLRPEGTAGVMRAVIEHSLDRGQLPVKLNYAGPFFRYE 125

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +   +  ++G            D H    
Sbjct: 126 RPQAGRYRQLQQVGVEAIGVDDPALDAEIIALADRSYRSLGLQDFRLELTSLGDRHCRPE 185

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   L  + L  + +    +  LR +D                       + T  A
Sbjct: 186 YRQKLQDFLFALPLDEETRKRAEINPLRVLDDK----------------RPEVQEMTADA 229

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L  + +D                            +       ++ L+   G       
Sbjct: 230 PLMLDHLDA---------------------------ECREHFETVTGLLDDMGVP---YV 259

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   G
Sbjct: 260 INPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLSGIG 311

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           + +G+ R ++AL++   +    +    V +  +    D+          LR AGI  +M 
Sbjct: 312 YGLGVDRTMLALEAEGVTVGAERR---VDVYGVPLGKDAKKALAGIVNTLRAAGISTDMS 368

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            G  +     +K ADR N    ++ G  E     + +KD+   ++    +    ++ + +
Sbjct: 369 YG-DRGLKGAMKGADRSNALYTLVLGEQELENNTIAVKDMRAHEQHDVALDEVVAFLQGK 427


>gi|325856631|ref|ZP_08172269.1| histidine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325483345|gb|EGC86320.1| histidine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 455

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 145/486 (29%), Positives = 220/486 (45%), Gaps = 57/486 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+  RN I D+IR +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGPEEMAKRNYIFDTIRQVYALYGFQQIETPAMETLHTLMGKYGEEGDKL 63

Query: 65  ---RPNKGVFSLQDDDGQWIS---------------LRYDLTAPLARYVAENFDTIVFPC 106
                N G + L+      ++               LRYDLT P ARYV  + + +  P 
Sbjct: 64  LFKILNSGDY-LKSVSDDELTERNTLKMQTKLCEKGLRYDLTVPFARYVVMHREELQLPF 122

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       G+      
Sbjct: 123 KRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSKFGV---RVQ 179

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E         
Sbjct: 180 IKINNRKILTGIAEVIGEKDK-----IVDITVAIDKLDKIGLDNVNAELREN-------- 226

Query: 227 TKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
               N++ E I+ +   + ++   E+ +  + EL+K +  G KG  E   I ++++ SG 
Sbjct: 227 ----NISEEAIEKLQPVIKLEGTNEEKLAVIAELLKDSETGLKGVEETRFILDMLKTSG- 281

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
             N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F   
Sbjct: 282 LKNEIQLDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGIFGMP 332

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +   G S G  R+   L +L+       +   +L           +         R AG
Sbjct: 333 GLSGVGISFGADRIYDVLNALDLYPKESVQGTQLLFINFGEKET--AYCMPIIAAARQAG 390

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           IRAEM+  ++K    Q+ YA+ ++     + G  E     + +KD+A G +     +   
Sbjct: 391 IRAEMYPDNAK-MKKQMNYANAKSIGFVALAGESEIEADKITLKDMATGNQQLVTAEEMM 449

Query: 465 SWREAR 470
           S    R
Sbjct: 450 SLIMRR 455


>gi|224476728|ref|YP_002634334.1| histidyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254782345|sp|B9DNF9|SYH_STACT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|222421335|emb|CAL28149.1| histidyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 428

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 98/470 (20%), Positives = 185/470 (39%), Gaps = 50/470 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D    + R    I   +  + E Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IKIPRGTQDILPDQSRKWRYIEAKLDELMELYNYKEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   EN        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIENKMQGDPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K     I    +        + +  
Sbjct: 122 RQFNQFGVEAIGAQDPSIDAEILAMVMHIYQSFGLKHLKLVINSVGDFDSRKEYNKALIE 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +      +I     D   +     +++L  +   D             +    +  +L
Sbjct: 182 HFE-----PVIDTFCNDCQARLYTNPMRILDCKVDRDKE---------AVKTAPRITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + ++  +++ + +                          +        +VRGL+YYT 
Sbjct: 228 NEESKEYFNQVKQYLDDL-----------------------NIPYVEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P            ++ GGGRY+GL+    G      GF++ I RL++   +
Sbjct: 265 TAFELMIDSP-----DYDGAITTLCGGGRYNGLLELLDGPKQTGIGFALSIERLLL---A 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           LE     I+E   + +  +     +          LR  GI+A+      +    Q+K A
Sbjct: 317 LEEEGIEIEEDEHLDLFIVTMGEKADRYAVNLLNDLRHHGIKADKDY-LKRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +R      I+ G  E   G + IK +  G+  S  + +  S+ E +  + 
Sbjct: 376 NRVGAEYTIVIGEQELEDGNIDIKHMDSGETDSIHLADLVSYFENKKEKQ 425


>gi|86133183|ref|ZP_01051765.1| Histidyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85820046|gb|EAQ41193.1| Histidyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 454

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 137/502 (27%), Positives = 224/502 (44%), Gaps = 70/502 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED- 64
           ++  +P+G  D    E+  R+ I+++I+  +E +GF PIETP  E S +L GK+  + D 
Sbjct: 1   MKPSIPKGTRDFSPTEVANRSYIMNTIKTTFETFGFQPIETPSFENSSTLMGKYGEEGDR 60

Query: 65  ----RPNKGVF-------SLQDDDGQWIS-------LRYDLTAPLARYVAENFDTIVFPC 106
                 N G F        L D +   ++       LRYDLT P ARYV ++ + I FP 
Sbjct: 61  LIFKILNSGDFLKKADAQLLADKESTKVTSQISEKALRYDLTVPFARYVVQHQNEITFPF 120

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           + Y++ PV+R ++   GRFR+F QCD D VGS +   +AE   +       +G+   +  
Sbjct: 121 KRYQVQPVWRADRPQKGRFREFYQCDADVVGSKSLWQEAEFIQLFDTVFTKLGLT--ETT 178

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I INNRKIL GI E IG          +    A+DKLDK G   V+  +           
Sbjct: 179 IKINNRKILSGIAEVIGAQDK-----LIDFTVALDKLDKIGQAKVEEEML---------- 223

Query: 227 TKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                ++ E I  +    +      +++  L  ++  +  G +G  EL  +     + G 
Sbjct: 224 --AKGISEEAIQKVQPLFNFKGSNLENLDALDLMLAASDEGLQGVKELRFVINATTELGL 281

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
            S  +++  T+ RGL YYTG ++E            K V  GS+GGGGRYD L   F  +
Sbjct: 282 QSANLEVDVTLARGLNYYTGAIFEV--------SAPKGVKMGSIGGGGRYDDLTGIFGMK 333

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           +V   G S G+ R+ + L+ L    +       VL                    LR   
Sbjct: 334 DVSGVGISFGLDRIYLVLEELGLFKSVDLPKPKVLFINFGDAEGL--YCMKAISELRKYN 391

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I+AE++  ++K    Q+ YA+ R     ++ G+ E ++ +  +K++  G++         
Sbjct: 392 IKAELYPDAAK-MKKQMTYANNRAIEYVVLAGSQEVAQEVFTLKNMITGEQ--------- 441

Query: 465 SWREARVAQITIPISELVSTVK 486
                         +ELV+ ++
Sbjct: 442 ---------QQCSKAELVNKLQ 454


>gi|289550604|ref|YP_003471508.1| Histidyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180136|gb|ADC87381.1| Histidyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 419

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 97/464 (20%), Positives = 186/464 (40%), Gaps = 50/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   +E      I + +  + + Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IKIPRGTQDILPEETAKWRYIENKLAQLMKLYNYQEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   EN        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGNRSITLRPEGTAAVVRSYIENKMQGLPNQPVKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K     I  I + +      E +  
Sbjct: 122 RQFTQFGVEAIGAEDPSIDAEVLAMVMQIYQSFGLKHLKLVINSIGDAESRKEYNEALVK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +  +++        D   +     +++L  +   D     T            +  +L
Sbjct: 182 HFEPVIDDF-----CSDCQSRLHTNPMRILDCKVDRDKKAIKT---------APKITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + +     + + +                          +      S +VRGL+YYT 
Sbjct: 228 NDESKAYYEAVKQYLDDL-----------------------NIPYVEDSNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G N    GF++ I RL++AL+ 
Sbjct: 265 TAFELMMDNPNYD-----GAITTLCGGGRYNGLLQLLDGPNQTGIGFALSIERLLLALEE 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                   + +    +  +     +           R  GI A+     ++    Q+K A
Sbjct: 320 ENIDIVENETLD---LFIVTMGEAANHFAVKLLNDCRKNGISADKDY-LNRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           DR N    I+ G  E    ++++K +  G   + + +N  S+ +
Sbjct: 376 DRLNATYTIVIGDQELDNQIVEVKHMESGNSETVKFENLLSYFK 419


>gi|288803542|ref|ZP_06408973.1| histidine--tRNA ligase [Prevotella melaninogenica D18]
 gi|302345502|ref|YP_003813855.1| histidine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|288333965|gb|EFC72409.1| histidine--tRNA ligase [Prevotella melaninogenica D18]
 gi|302150053|gb|ADK96315.1| histidine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 452

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 144/481 (29%), Positives = 216/481 (44%), Gaps = 57/481 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D    E+  RN I D+I+ +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGPDEMAKRNYIFDTIKRVYALYGFQQIETPSMETLQTLMGKYGEEGDKL 63

Query: 65  ---RPNKGVFSLQDDDGQWI---------------SLRYDLTAPLARYVAENFDTIVFPC 106
                N G + L+    + +                LRYDLT P ARYV  + D +  P 
Sbjct: 64  LFKILNSGDY-LKAVSDEELKERNTLKMQTKLCEKGLRYDLTVPFARYVVMHRDELQLPF 122

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++       GI      
Sbjct: 123 KRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIIDTVFTEFGI---RVQ 179

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I INNRKIL GI E IG          + +  AIDKLDK GL  V   L           
Sbjct: 180 IKINNRKILTGIAEVIGEKDK-----IVDITVAIDKLDKIGLDNVNEELRNN-------- 226

Query: 227 TKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                ++ E I+ +   + ++   E+ +  + E++K +  G KG  E   I E ++ SG 
Sbjct: 227 ----GISEEAIEKLQPIIKLEGTNEEKLDVIAEVLKESETGLKGVEETRFILETLKGSGL 282

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
           N N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F   
Sbjct: 283 N-NEIQLDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGIFGMP 332

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +   G S G  R+   L +L+       +   +L           +         R AG
Sbjct: 333 GISGVGISFGADRIYDVLNTLDLYPKESVQGTQLLFINFGEKET--AYCLPIVAAARRAG 390

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           IR EMF   +K    Q+ YA+ +N     + G  E   G + +K++  G++   + +   
Sbjct: 391 IRTEMFPDKAK-MKKQMSYANAKNIGFVALAGETEMQEGKITLKNMTTGEQELVKPEEII 449

Query: 465 S 465
           S
Sbjct: 450 S 450


>gi|312796094|ref|YP_004029016.1| histidyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167869|emb|CBW74872.1| Histidyl-tRNA synthetase (EC 6.1.1.21) [Burkholderia rhizoxinica
           HKI 454]
          Length = 445

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 99/506 (19%), Positives = 187/506 (36%), Gaps = 81/506 (16%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+   +    +G  D   ++  +      +++++   YG+  I TP++E++    + + +
Sbjct: 5   KRKLEKLTGVKGMNDILPRDAGLWEFFESTVKSMLRAYGYQNIRTPIVEHTSLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ +++R + TA + R   E+      P R + IGP+FR+E+ 
Sbjct: 65  VTDIVEKEMYSFVDSLNGEQLTMRPENTAAVVRAAIEHNLLYDGPKRLWYIGPMFRHERP 124

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNR 172
             GR+RQF Q  V+ +G +   ADAE+ +M     + +G                   +R
Sbjct: 125 QRGRYRQFHQVGVEALGFAGPDADAEIILMCQRLWDDLGLTGIRLEINSLGQAQERAAHR 184

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
             L   LE+     DD            D   +     +++L  +               
Sbjct: 185 NELIAYLERHVELLDD------------DAKRRLYTNPLRVLDTKNPAMQD--------- 223

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
            +     ++ FL          +  L+                               I+
Sbjct: 224 IATHAPKLIDFLGDASLAHFEGVQRLLSAN-----------------------HIPFTIN 260

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
             +VRGL+YY   V+E +          K    G+V GGGRYD L+ +  G+  PA G++
Sbjct: 261 PRLVRGLDYYNLTVFEWVT--------DKLGAQGTVAGGGRYDPLIEQLGGKPAPACGWA 312

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           +G+ R++  L+  +             +  +     +  +  +  + LR  G+   +   
Sbjct: 313 LGVERILELLREDQLVP----SDDGCDVYVVHQGDAARERAFVIAERLRDTGLDVILHCS 368

Query: 413 SSK---NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +     +F +Q+K AD      A+I G  E  R  + IK L                  A
Sbjct: 369 ADGAPASFKSQMKRADASGAAYAVILGDDEVQRDEVSIKALR------------GDPAGA 416

Query: 470 RVAQITIPISELVSTVKKILQENKEE 495
              Q  +P   L   +   +    +E
Sbjct: 417 DGVQQRVPAEHLTEFLIDAMVAPADE 442


>gi|270291329|ref|ZP_06197551.1| histidyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280175|gb|EFA26011.1| histidyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 424

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 93/471 (19%), Positives = 174/471 (36%), Gaps = 57/471 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G AD      +    +    R  +  Y ++ I TP+ E  +   +   D  D 
Sbjct: 1   MKYQKPKGTADILPPYSKEWQFVEQKARETFALYNYEEIRTPMFEKFEVFSRSAGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFDDKGGRHIALRPEGTAGVVRAFVENKLYGPEHQKPVKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V+  GS +   D +   M  D L  + +      I       +R+     
Sbjct: 121 GRLREFHQIGVEAFGSDSPKIDVDTITMAMDFLSQLKVAGLKLVINTLGDQASRQQYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L++        D  ++     +++L  +  TD             +   
Sbjct: 181 LIDYLEPHYDELSD--------DSKERLHKNPLRVLDSKDATDQE---------IVKDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L+ D +K   ++ E +                               + S++VRG
Sbjct: 224 SILDYLTEDAQKHFAQVKEQLDALE-----------------------IPYVVDSSMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E ++    + +        ++  GGRY+GLV    G  V   GF +G+ RL
Sbjct: 261 LDYYNHTIFEIMVADSALGKGD-----VTICAGGRYNGLVQELGGPEVSGVGFGLGVERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L     +      +       +       ++       LR      E      +   
Sbjct: 316 LLLLNEQTQAALQASRLD---FYVVGIGEAVQTETLKIVHELRKMNFVTEQDYLE-RKPK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            Q K AD+ N    I  G  E    + ++K++A G E +  +   +  +  
Sbjct: 372 AQFKSADKLNARYVITVGEAEMQAHVFKLKEMATGTEKTLSLDELKDIKND 422


>gi|254786615|ref|YP_003074044.1| histidine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|237683869|gb|ACR11133.1| histidine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 423

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 102/458 (22%), Positives = 190/458 (41%), Gaps = 63/458 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  +G  D    +      +  +I ++ + YGF  I  P+LE ++   + + +  D  
Sbjct: 3   KLQAVKGMNDLLPADSPYWQYLEATITDVVQGYGFQEIRFPILEATELFKRSIGEVTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF---PCRTYRIGPVFRNEKHGPG 123
            K +++  D + + ++LR + TA   R   ++           + + +GP+FR EK   G
Sbjct: 63  EKEMYTFLDRNDESVTLRPEGTASCVRACEQHQLLYNRGTIAQKLWYMGPMFRYEKPQKG 122

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGI 178
           R RQF Q  V+  G ++  ADAE+ +M A   + +GI        +       R      
Sbjct: 123 RLRQFHQIGVEAYGIASADADAELLIMTARLWKTLGIDDAVELQINSLGTNEARANFRAA 182

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L       + KL+E        D   +     +++L  +       D    A L      
Sbjct: 183 LVDFLSANEAKLDE--------DSQRRLATNPLRILDSK-------DADTQALLAD--AP 225

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  +  +    L   +                            +  +++ +VRG
Sbjct: 226 DLADFLDDESREHFALLQRYLTAA-----------------------GVKFTVNTRLVRG 262

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY+  V+E +          +    G+V  GGRYDGLV++  GQN PA GF++G+ RL
Sbjct: 263 LDYYSRTVFEWVTN--------RLGAQGTVCAGGRYDGLVAQLGGQNTPAVGFAMGLERL 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKN 416
           ++ ++ L +   +I     V +  +    + + +    T+ LR     +R +M  G+  +
Sbjct: 315 VLLVQELNAFPKDISRAADVYLLALG---NVIPEAFALTEQLREQAPHLRVQMNTGAG-S 370

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           F +Q+K A+R    + +I G  E S G + +K L   +
Sbjct: 371 FKSQMKKAERSGADVVLILGEDEASAGEVTVKYLRSDE 408


>gi|226366292|ref|YP_002784075.1| histidyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254782341|sp|C1B4E1|SYH_RHOOB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226244782|dbj|BAH55130.1| histidyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 423

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 98/473 (20%), Positives = 179/473 (37%), Gaps = 70/473 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K +      P+G  D    +      + D +       G+  IE P+ E +    + +
Sbjct: 1   MSKAS--TFSAPKGVPDYVPPQSSEFVAVRDGLTRAARLAGYGHIELPIFEDTGLFARGV 58

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 59  GESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHGLDRGQLPVKLSYAGPFFRYE 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +       +G            D      
Sbjct: 119 RPQAGRYRQLQQVGVEAIGVDDPALDAEVIAVADAGFRGLGLEGFRLEITSLGDDTCRPQ 178

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   L  + L  + +    +  LR +D       + V+ +  +             
Sbjct: 179 YRERLQEFLFALPLDEETRRRAEINPLRVLDDK----RKEVREMTAD------------- 221

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   +M+  LS   +    E+   +                               
Sbjct: 222 ------APLMLDHLSDTAKAHFDEVLAHLDAL-----------------------GVPYV 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +   G
Sbjct: 253 VNPRMVRGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQPLSGIG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F +G+ R ++AL +   +  +        +  +    ++ +K  +  Q LR  GIR ++ 
Sbjct: 305 FGLGVDRTVLALAAEGKTAGSTARCE---VFGVPLGEEAKAKLVVIAQQLRAQGIRVDLA 361

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            G ++     +K ADR    LA++ G  + + G + IK+LA G + S    + 
Sbjct: 362 YG-NRGVKGAMKAADRSGAALALVLGDRDIAEGTVGIKNLATGDQESVSSADV 413


>gi|19113233|ref|NP_596441.1| mitochondrial and cytoplasmic histidine-tRNA ligase Hrs1
           [Schizosaccharomyces pombe 972h-]
 gi|74582161|sp|O43011|SYH_SCHPO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|2956779|emb|CAA17892.1| mitochondrial and cytoplasmic histidine-tRNA ligase Hrs1
           [Schizosaccharomyces pombe]
          Length = 538

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 125/518 (24%), Positives = 222/518 (42%), Gaps = 66/518 (12%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K T    + P+G  D   K++ +R  I  ++  I++ +G   ++TP+ E  + L     
Sbjct: 56  KKDTSFTLKTPKGTKDWCDKDVVLREHIFSTVTEIFKRHGGVTLDTPVFELKEILSGKYG 115

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH- 120
           ++   +K ++ L+D  G+  SLRYDLT P AR++A N    V   + + I  V+R ++  
Sbjct: 116 ED---SKLIYDLKDQGGELCSLRYDLTVPFARWLAMNPK--VTSIKRFHIAKVYRRDQPA 170

Query: 121 -GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
              GR R+F QCD D          D+E   ++ + L+A+  +  +Y I +N+RKILDGI
Sbjct: 171 MTKGRMREFYQCDFDIAGNYDPMIPDSEALKVLVEALDAL--EVGNYTIKLNHRKILDGI 228

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
               G+  D    +   +  A+DKLDK   + V+            +      L  E  D
Sbjct: 229 FTVCGVPDD----KIRTISSAVDKLDKLPWEDVRR-----------EMVVEKGLKEEVAD 273

Query: 239 IMVSFLSIDLEKSMHELYE---LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            +  ++ +  ++S+ +  E   L+    +    FN++ ++ + +   G   +R     ++
Sbjct: 274 KIKEYVLLKGDRSLLDKLEADSLLSSNSSAVAAFNDMRLLFDYLEAFGVL-DRFSFDMSL 332

Query: 296 VRGLEYYTGCVYEAILGF-----------------PVMNEKQKPVVFGSVGGGGRYDG-- 336
            RGL+YYTG +YEA+                             +  GS+  GGRYD   
Sbjct: 333 ARGLDYYTGIIYEAVTEASAPKIKSSAEKKKSADPEADRSNDDSIGVGSIAAGGRYDNLV 392

Query: 337 -LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD---SLSK 392
            + +  K   +P  G S+G+ R+   L+S     +       V +       +    L +
Sbjct: 393 GMFAAKKNAKIPCVGISLGLERIFSILRSKIPDEDIRANDVDVFVMAFGGGKEWTGFLKE 452

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + L   GI+AE           Q   AD+ + P A+I G  E ++G ++IK +  
Sbjct: 453 RMSVCKDLWANGIKAEFLYKVKPKPRQQFDAADKFDVPFAVILGQDEFAKGSVRIKQMGL 512

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
            +                     +P  E+VS +KK+L+
Sbjct: 513 KE--------------NSDEGQLVPREEMVSVLKKLLK 536


>gi|315038168|ref|YP_004031736.1| histidyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276301|gb|ADQ58941.1| histidyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 428

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 109/465 (23%), Positives = 182/465 (39%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D   ++     ++ ++ RN +    +  I TP  E  +   +   D  + 
Sbjct: 1   MRVQKPKGTVDILPEQSGSWQKVEETARNFFNRANYREIRTPSFENYEIFSRSSGDSSEI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   E+         P   + +   FR E+   
Sbjct: 61  VEKQMYDFNDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GSS   AD +  MM  D L  +G+K    HI        RK     
Sbjct: 121 GRQREFHQVGVESFGSSNPLADVQTIMMGHDLLAELGVKNYQLHINTLGNEQVRKDYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D                 
Sbjct: 181 LVNYFTPVKDELSE--------DSQRRLRDNPLRILDSKDDRDKKF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  D +++   + +++          ++L                       VRG
Sbjct: 224 KIRDFLDDDSKQNFESILKMLDQLGIDYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRYD LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDKSLWESAT-----TILGGGRYDHLVEEFNGPATPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+    +    +    +     +    +  K    T+ LR  G  A+  + + K   
Sbjct: 316 MLVLEKQNPALFENR---GIDFFITNIGDGTAQKAIEITRSLRKQGFEADFDV-NQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q K ADR +    I  G  E   G+L IK LA GK +   +++ 
Sbjct: 372 AQFKKADRDHAKYVITLGEKELENGVLNIKRLADGKTIDLSLEDI 416


>gi|218780599|ref|YP_002431917.1| histidyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226737068|sp|B8FKS7|SYH_DESAA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|218761983|gb|ACL04449.1| Histidyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 419

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 97/468 (20%), Positives = 178/468 (38%), Gaps = 54/468 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            +L RGF D    ++ +   I    R + EN+GF  I  P++E ++   + +  D D   
Sbjct: 2   IKLIRGFRDILPGQVELWQDIESKARVLLENFGFREIRLPIMESTELFARGIGADTDIVE 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRI-GPVFRNEKHGPGRFR 126
           K +++  D  G+  +LR + TA + R   E+      P + +   GP+FR+E+   GR+R
Sbjct: 62  KEMYTFPDSKGRGQTLRPEATASVVRSYIEHGYAGSDPVQKFYTIGPMFRHERPQKGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR-NDYHIGINNRKILDGILEKIGLH 185
           QF Q + +  G ++  AD ++  M+      + +     +   +   +      E +   
Sbjct: 122 QFYQINAEMFGVASPLADVQIMYMLHLFFTGLDVPDVVTHVNSLGCPECRPKFREALISF 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             DK++         D   +     ++  + + +     +  +GA         +   L 
Sbjct: 182 VSDKMDRL-----CSDCQRRADANPLR--VIDCKVPGCKEAVQGA-------PSIQDHLC 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D ++    + + + G     +    L                       VRGL+YYT  
Sbjct: 228 PDCKEHFEAVIKGLDGLNVPYEIDPRL-----------------------VRGLDYYTRT 264

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E                  +V GGGRYDGLV    G+  PA GF++G  RL   L + 
Sbjct: 265 TFEVQTTL--------LGAQNAVAGGGRYDGLVKILGGKETPAIGFAVGFDRLAALLGAE 316

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           E             +       ++      +       G+RAEM     K+  +Q+K A+
Sbjct: 317 EKDFTVPPA-----LFIAALGDEARKIAFGWLCDFNARGVRAEMDY-EGKSLKSQMKQAN 370

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           R N    +I G  E   GM  ++++   ++    +        A + Q
Sbjct: 371 RFNAGRVLILGENELQNGMAVLRNMDTKEQEEVALDGLTDRVAALINQ 418


>gi|194365530|ref|YP_002028140.1| histidyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|229558744|sp|B4STN3|SYH_STRM5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|194348334|gb|ACF51457.1| histidyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 465

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 143/506 (28%), Positives = 231/506 (45%), Gaps = 64/506 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGTLELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQ------------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
               V+ +Q            D     ++LR+DLT PLARYVAE+   + FP R Y++  
Sbjct: 62  ---QVYFVQSTGALANAAESGDRSLPEMALRFDLTVPLARYVAEHEHELTFPFRRYQMQR 118

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GRFR+F QCD+D +G  + +   +  ++         ++  D+ I +NNR 
Sbjct: 119 VYRGERAQRGRFREFYQCDIDVIGKDSLSVRYDAEVLAVIHAVFSELRIGDFSIQLNNRN 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L G  E +G+   ++   +L VLR +DKLDK G   V+  L            +G  + 
Sbjct: 179 LLRGYFESLGVAEGER---QLAVLREVDKLDKRGADYVRETL----------VGEGFGIP 225

Query: 234 SEQIDIMVSFLSIDLEKSMH------ELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
           +EQ++ +++F+++  +           L    + +     G  EL  + +LV+  G    
Sbjct: 226 AEQVEKILAFVAVRSKGHDDALAQLAALEAAAESSETLRAGVAELREVLQLVQALGVPET 285

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
              ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S +    +P
Sbjct: 286 AYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYEDLASHYSKSKLP 337

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             G SIG+SRL   L+               L+  M  D   + +     + LR  GI  
Sbjct: 338 GVGISIGLSRLFWQLREAGLIDGIEASSVQALVALM--DEQGMPQSLDIARRLRAGGINT 395

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E+ +   K  G Q +YA +      ++ G  E +RG++ +KDL                 
Sbjct: 396 EVQM-EPKKIGKQFQYAAKAGIRFVVLAGEDELARGVVAVKDL----------------- 437

Query: 468 EARVAQITIPISELVSTVKKILQENK 493
             R  Q  +   EL ST+   L++++
Sbjct: 438 -LREQQFEVSRDELASTLLVELEQSR 462


>gi|15603876|ref|NP_246950.1| histidyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431889|sp|P57988|SYH_PASMU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|12722453|gb|AAK04095.1| HisS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 423

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 104/489 (21%), Positives = 196/489 (40%), Gaps = 72/489 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   +   +R++ +NYG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCSPTESPLWQWVEGKVRSVLQNYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNQEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+ M+ A   + +GI      + +N+   L+   
Sbjct: 116 PQKGRYRQFHQAGVEVFGIPNPEIDAELIMLTARLWKELGI-AEHVTLQLNSIGSLEA-- 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            K          ++ + L + ++ ++     +++L  + +                    
Sbjct: 173 RKNYRSALVAFLQQHVDLLSEEEKERLEKNPLRILDTKNQA---------LQEVLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++++L  D  +   +L  L+                            + +++  +VRGL
Sbjct: 224 LLAYLDDDSREHFAQLCALLDA-----------------------VGIQYEVNPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATTGVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +  S         V I  +     +        + LRT    +R  M   S  NF
Sbjct: 313 LLVQEVNQSIRLPSA---VDIYVVYQGEGTTLAAFQLAETLRTELPQLRV-MTHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q K AD+    LA++ G  E     + +K L  G E                 Q T+ 
Sbjct: 369 KKQFKRADKSGATLALVIGESEVQNQQVVVKHLLGGAE-----------------QQTLA 411

Query: 478 ISELVSTVK 486
           + ++V  +K
Sbjct: 412 LDDIVDYIK 420


>gi|325956619|ref|YP_004292031.1| histidyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333184|gb|ADZ07092.1| histidyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327183445|gb|AEA31892.1| histidyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 428

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 109/465 (23%), Positives = 182/465 (39%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D   ++     ++ ++ RN +    +  I TP  E  +   +   D  + 
Sbjct: 1   MRVQKPKGTVDILPEQSGSWQKVEETARNFFNRANYREIRTPSFENYEIFSRSSGDSSEI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   E+         P   + +   FR E+   
Sbjct: 61  VEKQMYDFNDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GSS   AD +  MM  D L  +G+K    HI        RK     
Sbjct: 121 GRQREFHQIGVESFGSSNPLADVQTIMMGHDLLAELGVKNYQLHINTLGNEQVRKDYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D                 
Sbjct: 181 LVNYFTPVKDELSE--------DSQRRLRDNPLRILDSKDDRDKKF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  D +++   + +++          ++L                       VRG
Sbjct: 224 KIRDFLDDDSKQNFESILKMLDQLGIDYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRYD LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDKSLWESAT-----TILGGGRYDHLVEEFNGPATPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+    +    +    +     +    +  K    T+ LR  G  A+  + + K   
Sbjct: 316 MLVLEKQNPALFENR---GIDFFITNIGDGTAQKAIEITRSLRKQGFEADFDV-NQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q K ADR +    I  G  E   G+L IK LA GK +   +++ 
Sbjct: 372 AQFKKADRDHAKYVITLGEKELENGVLNIKRLADGKTIDLSLEDI 416


>gi|21220009|ref|NP_625788.1| histidyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289772779|ref|ZP_06532157.1| histidyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|32130150|sp|Q9KXP2|SYH_STRCO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|8249967|emb|CAB93388.1| histidyl tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289702978|gb|EFD70407.1| histidyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 425

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 95/481 (19%), Positives = 178/481 (37%), Gaps = 69/481 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M + +    + P+G  D    +      + ++I     N G+  IETP  E  +   + +
Sbjct: 1   MTRPSVSTFKAPKGTYDLLPPDSAKFLAVREAIAAPLRNSGYGYIETPGFENVELFARGV 60

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRN 117
            +  D   K ++  +   G  ++LR + TAP+ R V E             +  G  +R 
Sbjct: 61  GESTDIVTKEMYVFETKGGDRLALRPETTAPVLRAVLEANLHKAGNLPVKVWYSGSQYRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGI 169
           E+   GR+R F Q   + +G+     DAE+ ++   +  A+G            D     
Sbjct: 121 ERPQKGRYRHFSQVGAEAIGAEDPALDAELIILADQSYRALGLQDFRILLNSLGDQECRP 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L  + L  +      +  LR +D         V+  L E            
Sbjct: 181 VYRAALQDFLRGLDLDEETLRRAEINPLRVLDDKRP----DVQKQLTE------------ 224

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                    ++  +L    +    E+ EL+       +   +L                 
Sbjct: 225 -------APLLRDYLCDACKAYHEEVRELITAAGVVFEDDPKL----------------- 260

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                 VRGL+YYT   +E +                +VGGGGRYDGL     G ++P+ 
Sbjct: 261 ------VRGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPSLPSV 306

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G+++G+ R ++AL++     +         +  +    ++          LR  G+ A+ 
Sbjct: 307 GWALGVDRTVLALEAEGIELDIPSATS---VFAVPLGEEARRILFAKVTELRKNGVAADF 363

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             G  K     +K A+R      ++ G  + + G++Q+KD+  G++ +  +    +  E+
Sbjct: 364 SYG-GKGLKAAMKAANRSGARYTLVLGERDLAEGVVQLKDMESGEQTAIGVNEIVAELES 422

Query: 470 R 470
           R
Sbjct: 423 R 423


>gi|322708331|gb|EFY99908.1| histidyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 532

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 126/507 (24%), Positives = 220/507 (43%), Gaps = 53/507 (10%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K + +  + P+G  D   +++ +R  +   I ++++ +G  P++TP+ E  + L     +
Sbjct: 58  KASAVTLKTPKGTRDWSGQDMLLREEVFKMITDVFKKHGGTPLDTPVFELKEILAGKYGE 117

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH-- 120
           +   +K ++ LQD  G+  SLRYDLT P AR++A N    +   + Y I  V+R ++   
Sbjct: 118 D---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNN---IQAVKRYHIAKVYRRDQPAI 171

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F QCD D  G           + +   +E          I +N+R++LDG+  
Sbjct: 172 ARGRYREFHQCDFDIAGVYDPMIPDAEVLRII--VEVFEALELGVTIKLNHRQVLDGMFA 229

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  +    +   +  A+DKLDK   + VK  + E              L SE  D +
Sbjct: 230 VAGVTPE----KIRTISSAVDKLDKMSWEDVKKEMVEE-----------KGLASEVADRI 274

Query: 241 VSFLSIDLEKS----MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++      S    + +  E +      ++G +++ +++  V   G  +++I    ++ 
Sbjct: 275 GEYVRHAGTISETLQLLKSREELVANEQVKRGLDDMTLLASYVEAFGI-ADKISFDLSLA 333

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPV----------VFGSVGGGGRYDGLVSRFKGQNV 346
           RGL+YYTG +YE I   P   E Q               GS+  GGRYD LV  +  + +
Sbjct: 334 RGLDYYTGLIYEVINLPPKAEEGQASGKKSKKDDPASQVGSIAAGGRYDNLVGMYGKRQI 393

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS----LSKYQMYTQMLRT 402
           P  G S G+ R+   L++        +    V +  M     S    L +     Q L +
Sbjct: 394 PCVGISFGVDRIFTILEARRRKDGLKQRRD-VDVYVMAFGDKSSNGLLLERMSVAQRLWS 452

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGIRAE           Q K A+    PL +I G  E   G +++K L +G+        
Sbjct: 453 AGIRAEFSPKVKPKLPQQFKAAE--GVPLGVILGQTELDAGQVRVKLLGQGE------NK 504

Query: 463 NESWREARVAQITIPISELVSTVKKIL 489
            +     +     + + EL   VK++L
Sbjct: 505 GDDKPAEKDDGKLVSLDELADEVKRLL 531


>gi|254499338|ref|ZP_05112009.1| histidyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254351443|gb|EET10307.1| histidyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 425

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 92/460 (20%), Positives = 180/460 (39%), Gaps = 59/460 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           R +  RG  D    +  +   I  +  N   NYG+  I  PL+E +    + + +  D  
Sbjct: 4   RIQAIRGMNDILPDKTLLWRYIEQTFINCLTNYGYQEIRFPLVESTQLFKRTIGEITDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  I+LR + TA   R   E+        + + +GP+FR+E+   GR+R
Sbjct: 64  EKEMYTFNDLNGDSITLRPEGTAGCVRACLEHGLLHNQQQKLWYLGPMFRHERPQRGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK-----RNDYHIGINNRKILDGILEK 181
           QF Q  V+  G +   A+ E+  +        G       + +    ++ R+    IL  
Sbjct: 124 QFNQLGVEAFGMAGAQAELELISLCRKFWIQFGFADLVQLQVNTLGELSERQKYKSILVD 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                  +L+E        D   +     +++L  +            A         ++
Sbjct: 184 YLNDHTAQLDE--------DSKRRLTRNPLRILDSK--NPEMQQLVANA-------PKLI 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L    ++        +                               I+  +VRGL+Y
Sbjct: 227 DVLEGKSKEHFQAFCNGLDAL-----------------------QIPYVINPVLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +          +     ++  GGRYD LV +  G   PA GF++G+ R+ + 
Sbjct: 264 YGHTVFEWVT--------DRLGSQATICAGGRYDILVEQLGGNATPAAGFALGVERIFLL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
           +++L       K+     +  +  + +++ K  +  + +R A    E+ +  +  +F +Q
Sbjct: 316 METLNLLPQETKKNS---LFIIGTNKEAIVKGLVIAEAIRNAFPALEVIVNTAGGSFKSQ 372

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSRE 459
            K AD+    LA++ G  E +   + IKDL  G ++++ +
Sbjct: 373 FKKADKSGARLALVLGEDELANQKISIKDLRNGTEQITVD 412


>gi|68467921|ref|XP_722119.1| hypothetical protein CaO19.11533 [Candida albicans SC5314]
 gi|68468240|ref|XP_721959.1| hypothetical protein CaO19.4051 [Candida albicans SC5314]
 gi|46443902|gb|EAL03181.1| hypothetical protein CaO19.4051 [Candida albicans SC5314]
 gi|46444067|gb|EAL03345.1| hypothetical protein CaO19.11533 [Candida albicans SC5314]
          Length = 501

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 133/516 (25%), Positives = 219/516 (42%), Gaps = 59/516 (11%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K      + P+G  D   K++ +R  I  ++  +++ +G   I+TP+ E  + L     +
Sbjct: 16  KAQDFVLKTPKGTKDWADKDMVLREAIFGTLSTLFKKHGGVTIDTPVFELREILTGKYGE 75

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +   +K +++L+D  G+  SLRYDLT P AR+VA N    +                   
Sbjct: 76  D---SKLIYNLEDQGGELTSLRYDLTVPFARFVACNNIASIKRYHIA-KVYRRDQPAMTK 131

Query: 123 GRFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           GR R+F QCD D  G+        E+  ++ D L  +GI+  D+ + +N+RKILDGI + 
Sbjct: 132 GRMREFYQCDFDIAGNYDTMVPDSEILALLCDGLNGLGIQ--DFKVKLNHRKILDGIFQA 189

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  +D       +  A+DKLDK   + VK            +         E  D + 
Sbjct: 190 CGVKEED----VRKISSAVDKLDKSPWEVVKK-----------EMVVEKGQPEEVADKIG 234

Query: 242 SFLSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
            F+  +          +  E++K   + +KG  E+ ++++ V         +    ++ R
Sbjct: 235 EFVKHNGSIREVLEYLQSSEILKSNDSAQKGIEEMQILADYVDAFDITQ-YLSFDLSLAR 293

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKP-------------VVFGSVGGGGRYDGLVSRFKG- 343
           GL+YYTG +YEA+       E                 V  GS+  GGRYD LV  F   
Sbjct: 294 GLDYYTGLIYEAVTAASAPPENATELKAKSKDDDASAYVGVGSIAAGGRYDNLVGMFSNG 353

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYTQML 400
           +++P  G S G+ RL   +K+  +  N       V +            L +    T  L
Sbjct: 354 KSIPCVGVSFGVERLFSIIKNRANLNNISANHTDVFVMAFGGGEGWNGFLKERMEITNKL 413

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
             AGI AE    S  N   Q   A++    LA+I G  E  +G L+IK L +G+E   E+
Sbjct: 414 WKAGINAEYLYKSKANIRKQFDAAEKAGAKLAVILGKEEYPQGQLRIKVLGQGEENEGEL 473

Query: 461 KNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                          +   EL++ V+  L  + ++I
Sbjct: 474 ---------------VTKDELLAAVQAKLSSDIDDI 494


>gi|224826450|ref|ZP_03699552.1| histidyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224601551|gb|EEG07732.1| histidyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 423

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 99/492 (20%), Positives = 180/492 (36%), Gaps = 85/492 (17%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    +        + +R    +YG+  I TP++E +    + + +  D  
Sbjct: 4   KIQAIRGMNDVLPADSHQWEYFENILRGWLADYGYQNIRTPIVEETRLFVRSIGEVTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G  ++LR + TA   R V E+        R + +GP+FR+E+   GR+
Sbjct: 64  EKEMYSFTDSLNGDSLTLRPEGTAGTLRAVVEHNLLYNATQRLWYMGPMFRHERPQKGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILD 176
           RQF Q  ++ +G +    DAE+ +M AD  + +G             +      +R+ L 
Sbjct: 124 RQFHQIGIEALGFAGPDIDAEIILMTADLWKRLGLADSVELQLNTLGNKDERAAHREALI 183

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             LE+     D+            D   +     +++L  +                   
Sbjct: 184 AYLERHHDMLDE------------DGKRRLYSNPLRVLDTKN---------PALQEICNA 222

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +  +L  +          ++ G                          R   +  +V
Sbjct: 223 APRLTDYLGDESRAHYEGWKAMIDGL-----------------------GIRYVENPRLV 259

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +               G+V  GGRYDGLV +  G+  P  GF +G+ 
Sbjct: 260 RGLDYYNQSVFEWVTTE--------LGAQGTVCAGGRYDGLVEQLGGKPAPGIGFGMGLE 311

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+++ L+       +      V +  +   + +          LR AG+      G   +
Sbjct: 312 RVMLLLQEKNRLPASR----GVDVYLVQQGAGAPLYAMQLAASLRAAGLSVIQHCGEG-S 366

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           F +Q+K AD      A+I G  E +     +K L                     AQ T+
Sbjct: 367 FKSQMKKADGCGAQFAVIVGENEVANATAVVKPLR-----------------LEAAQETV 409

Query: 477 PISELVSTVKKI 488
            ++ +  T+ +I
Sbjct: 410 ALAAVAETITRI 421


>gi|170718897|ref|YP_001784068.1| histidyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082298|sp|B0USG9|SYH_HAES2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|168827026|gb|ACA32397.1| histidyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 425

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 96/481 (19%), Positives = 196/481 (40%), Gaps = 64/481 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   + + +R++ + YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCSPTESLLWQWVEEKVRSVLQTYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ ++ A   + +GI  +   + +N+   L+   
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELILLTARLWKQLGIF-DHVTLQLNSIGSLES-- 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +       +  ++ + L + ++ ++     +++L  + +                    
Sbjct: 173 RQNYRSALVEFLQQHMDLLSEEEKERLVKNPLRILDTKNQV---------LQEVLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +  +   +L +L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDQESREHFSQLCDLLDA-----------------------VGIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G    + GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATCSVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE------MFLGS 413
           + ++ +            V I  +     +        +      IR E      M    
Sbjct: 313 LLVQEVNKQIVLPSA---VDIYVVYFGEKTTLPAFQLAEK-----IRTELPHLRTMTHCG 364

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARVA 472
             NF  Q K AD+     A++ G  E     + +KDL  G ++LS  + +   + +  + 
Sbjct: 365 GGNFKKQFKRADKVGAKFALVIGETEVKTQQVVVKDLLGGAEQLSLALTDVVIYLKQAIT 424

Query: 473 Q 473
           Q
Sbjct: 425 Q 425


>gi|304385081|ref|ZP_07367427.1| histidine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304329275|gb|EFL96495.1| histidine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 424

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 94/475 (19%), Positives = 170/475 (35%), Gaps = 65/475 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G AD      +    +    R  +  Y ++ I TP+ E  +   +   D  D 
Sbjct: 1   MKYQKPKGTADILPPYSKEWQFVEQKARETFALYNYEEIRTPMFEKFEVFSRSAGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFDDKGGRHIALRPEGTAGVVRAFVENKLYGPEHQKPVKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKI 174
           GR R+F Q  V+  GS +   D +   M  D L  +             D       R+ 
Sbjct: 121 GRLREFHQIGVEAFGSDSPKIDVDTITMAMDFLSQLKVAGLKLVINTLGDQASRQQYRQA 180

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   LE       D            D  ++     +++L  +  TD             
Sbjct: 181 LIDYLEPYYDELSD------------DSKERLHKNPLRVLDSKDATDQE---------IV 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +    ++ +L+ D +K   ++ E +                               + S+
Sbjct: 220 KDAPSILDYLTEDAQKHFAQVKEQLDALE-----------------------IPYVVDSS 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   ++E ++    + +        ++  GGRY+GLV    G  V   GF +G
Sbjct: 257 MVRGLDYYNHTIFEIMVADSALGKGD-----VTICAGGRYNGLVQELGGPEVSGVGFGLG 311

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL++ L     +      +       +       ++       LR      E      
Sbjct: 312 VERLLLLLNEQTQAALQASRLD---FYVVGIGEAVQTETLKIVHELRKMNFVTEQDYLE- 367

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    Q K AD+ N    I  G  E    + ++K++A G E +  +   +  +  
Sbjct: 368 RKPKAQFKSADKLNARYVITVGEAEMQAHVFKLKEMATGTEKTLSLDELKDIKND 422


>gi|305681034|ref|ZP_07403841.1| histidine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659239|gb|EFM48739.1| histidine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 426

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 103/475 (21%), Positives = 181/475 (38%), Gaps = 68/475 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K   +   P+G  D           + D+  +     G++ IE P+ E +    + +
Sbjct: 1   MTDKKLNKISAPKGVPDYVPPASAQFIAVRDTFAHHIRLAGYEHIELPIFEDTTLFARGV 60

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D  +K +++  D  G+ ++LR + TA + R V E+       P +    GP FR E
Sbjct: 61  GESTDVVSKEMYTFADRGGRSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLGYYGPFFRYE 120

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGIN 170
           +   GR+RQ  Q  V+ +G    T DAE+  +      ++G+K          D      
Sbjct: 121 RPQAGRYRQLQQVGVEAIGVDDPTLDAEVIALADRCFSSIGLKDYRLELTSLGDATCRPA 180

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   L K+ L    +    +  LR +D                       + T  A
Sbjct: 181 YREKLQEFLLKLPLDDATRHRAEINPLRVLDDK----------------RPEVQELTADA 224

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L       M+ +LS                     +       ++  +   G       
Sbjct: 225 PL-------MLDYLSP--------------------QAREHFEAVTGCLDDLG---VTYV 254

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +   G
Sbjct: 255 INPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQELSGIG 306

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F +G+ R ++AL++       + +   V +  +   + +  +       LR AGIRA+M 
Sbjct: 307 FGLGVDRALLALEAE---HTQVADPARVDVYGVALGAPAKRRLLTLINELRAAGIRADMS 363

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            G  +     +K ADR     A++ G  E   G++ +K+L    +    +     
Sbjct: 364 YG-DRGLKGAMKGADRAGARFALVLGDRELDAGIVAVKNLVDHTQTDVPLGQVAE 417


>gi|56461133|ref|YP_156414.1| histidyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81678386|sp|Q5QYB0|SYH_IDILO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|56180143|gb|AAV82865.1| Histidyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 415

 Score =  243 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 91/453 (20%), Positives = 166/453 (36%), Gaps = 69/453 (15%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++     ++   IR +  +YG+  I  P+LE +    + + +  D   K +++ 
Sbjct: 1   MNDLLPEQSPAWQQVEAVIRRVAASYGYSEIRMPVLESTQLFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D +G+ ++LR + TA   R   ++        R + +GP+FR E+   GR+RQF Q  +
Sbjct: 61  DDRNGESVTLRPEGTASCVRAGNQHGLLYNQIQRLWYMGPMFRYERPQKGRYRQFHQFGI 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILEKIGL 184
           +  G  +  ADAE+ ++ A      G                   N R  L   L     
Sbjct: 121 ETFGLESADADAEVILLSARLWREFGLADQVELQLNSLGSNEARANYRDALKAYLSDYES 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             DD            D   +     +++L  +                 E    +  + 
Sbjct: 181 ELDD------------DSKRRLESNPLRILDSKDEKTQK---------ILEGAPSLSEYW 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + ++   +L   ++           L                       VRGL+YY  
Sbjct: 220 DAESKEHFEQLTARLEAAGISYTLNERL-----------------------VRGLDYYNR 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ RL++ L+ 
Sbjct: 257 TVFEWVTTA--------LGAQGTVCAGGRYDGLVEQLGGKATPAVGFAMGMERLVLLLQE 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLK 422
                  +     V    M    ++        + LR     +R  +      +   Q+K
Sbjct: 309 QGK----LTPRRVVDAYLMPLGEEAELNAPRIAEQLRNELPELR-LVSHCGGGSMKKQMK 363

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
            AD+    +A+I G  E ++ ++ +K L   +E
Sbjct: 364 KADKSGAQVALIIGADEIAQQLVTVKPLRTAEE 396


>gi|88808090|ref|ZP_01123601.1| histidyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788129|gb|EAR19285.1| histidyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 421

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 97/460 (21%), Positives = 180/460 (39%), Gaps = 57/460 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   ++ R    +    R  +   G + I TPLLE ++   + + +  D  
Sbjct: 3   QLQSLRGMVDLLPEQTRRWQNVEAVAREHFRRAGLEEIRTPLLEVTELFARGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S  D   +  +LR + TA + R   ++        + +  GP+FR E+   GR R
Sbjct: 63  GKEMYSFLDRGERSCTLRPEGTASVVRAAVQHGLLSQGVQKLWYSGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR-KILDGILEKIGLH 185
           QF Q  V+ +G S+  +D E+  +  D L  +G++     I      +        +   
Sbjct: 123 QFHQIGVECLGVSSARSDVEVIALAWDLLADLGLEHVKLEINTLGTSEDRQAYRNTLVTW 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +++ ++        D   +     +++L  + ++  +                + + LS
Sbjct: 183 LEERSDQLDA-----DSQKRLSTNPLRILDSKNQSTQA---------LLNDAPTLQAALS 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +       +  L+                          S     ++ +VRGL+YY   
Sbjct: 229 AESASRFEHVQALLT-----------------------QLSIPFTHNTRLVRGLDYYGHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E            +     +V GGGRYDGLV +  G   PA G+++G+ RL++ L   
Sbjct: 266 AFEIT--------SDQLGAQATVCGGGRYDGLVQQLGGPATPAVGWALGMERLLLML--- 314

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                         +  ++    +        + LR AG+  E+  GS   FG Q K AD
Sbjct: 315 -----GNASDAAPDVYLVNRGDQAEGVALGLARDLRNAGLAVELD-GSGAAFGKQFKRAD 368

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNE 464
           R   P A++ G GE  +G+++IK L   G+E +    +  
Sbjct: 369 RCKAPSALVLGDGEVDQGIVRIKRLQGDGEEHTLPWNDPA 408


>gi|146308514|ref|YP_001188979.1| histidyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166228598|sp|A4XY31|SYH_PSEMY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|145576715|gb|ABP86247.1| histidyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 428

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 96/483 (19%), Positives = 182/483 (37%), Gaps = 73/483 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++      +  ++ ++ + YG+  I  P++EY++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPAWRYLESTLVSLLDGYGYKEIRLPIVEYTELFARGI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D  +K +++  D + + ++LR + TA   R V E+         + +  GP+FR E
Sbjct: 57  GEGTDVVDKEMYTFLDRNEESLTLRPEGTAGCVRAVLEHGLAGGGQVQKLWYAGPMFRYE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           K   GR+RQF Q  V+         DAE+ ++     + +G                   
Sbjct: 117 KPQKGRYRQFHQVGVEAFNLPGPDVDAELIVLTWRLWKKLGLADAVTLQLNSLGSSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L++     D+            D   +     +++L  +   + +     G
Sbjct: 177 AYRDALVAYLQERFDQLDE------------DSQRRLTTNPLRILDSK--NEATQAVLVG 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A         +  +L  +       +   +                            R 
Sbjct: 223 A-------PTLGDYLDEESRLHFEGVKARLDAA-----------------------GIRY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I+  +VRGL+YY   V+E +          K    G+V  GGRYDGLV++  G+  P  
Sbjct: 253 QINHKLVRGLDYYNRTVFEWVT--------DKLGAQGTVCAGGRYDGLVAQLGGKATPGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++G+ RL++ L++L+     +     V +      ++        T+ LR    G+R 
Sbjct: 305 GFAMGVERLVLLLETLDLLPAELNRAADVYVCAFGEAAEL--AALTLTERLRDELPGLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
            +      +F +Q K AD+     A+I G  E +  ++  K L    ++ S         
Sbjct: 363 LLN-SGGGSFKSQFKKADKSGARYALILGDDELAGRVVGCKPLRDDSEQQSVAWDALAEH 421

Query: 467 REA 469
             A
Sbjct: 422 LAA 424


>gi|15924621|ref|NP_372155.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927211|ref|NP_374744.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283310|ref|NP_646398.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49483876|ref|YP_041100.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486464|ref|YP_043685.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650512|ref|YP_186525.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82751229|ref|YP_416970.1| histidyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87160141|ref|YP_494282.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195442|ref|YP_500246.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268111|ref|YP_001247054.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394179|ref|YP_001316854.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221745|ref|YP_001332567.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979949|ref|YP_001442208.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509856|ref|YP_001575515.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141100|ref|ZP_03565593.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317217|ref|ZP_04840430.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732287|ref|ZP_04866452.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|255006416|ref|ZP_05145017.2| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257425755|ref|ZP_05602179.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428415|ref|ZP_05604813.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431053|ref|ZP_05607432.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433739|ref|ZP_05610097.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436654|ref|ZP_05612698.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257793704|ref|ZP_05642683.1| histidyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258410997|ref|ZP_05681277.1| histidyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420202|ref|ZP_05683157.1| histidyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258424056|ref|ZP_05686938.1| histidyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|258438204|ref|ZP_05689488.1| histidyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443667|ref|ZP_05692006.1| histidyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446874|ref|ZP_05695028.1| histidyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448788|ref|ZP_05696900.1| histidyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258450543|ref|ZP_05698605.1| histidyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258453606|ref|ZP_05701584.1| histidyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262048624|ref|ZP_06021507.1| histidyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051281|ref|ZP_06023505.1| histidyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203256|ref|YP_003282525.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893135|ref|ZP_06301369.1| histidyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282904211|ref|ZP_06312099.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906037|ref|ZP_06313892.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908950|ref|ZP_06316768.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911267|ref|ZP_06319069.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914436|ref|ZP_06322222.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282916899|ref|ZP_06324657.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282919405|ref|ZP_06327140.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282920180|ref|ZP_06327905.1| histidyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282924729|ref|ZP_06332397.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282928266|ref|ZP_06335871.1| histidyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|283770705|ref|ZP_06343597.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283958391|ref|ZP_06375842.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024687|ref|ZP_06379085.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|293503509|ref|ZP_06667356.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510527|ref|ZP_06669233.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293531068|ref|ZP_06671750.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|294848660|ref|ZP_06789406.1| histidyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295406752|ref|ZP_06816557.1| histidyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295428206|ref|ZP_06820838.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296275916|ref|ZP_06858423.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207649|ref|ZP_06924084.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245665|ref|ZP_06929530.1| histidyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300911731|ref|ZP_07129174.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380772|ref|ZP_07363440.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|46397739|sp|P60909|SYH_STAAM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|46397740|sp|P60910|SYH_STAAN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|46397741|sp|P60911|SYH_STAAU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|48474731|sp|P60912|SYH_STAAW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|56749382|sp|Q6G8T8|SYH_STAAS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|56749411|sp|Q6GG72|SYH_STAAR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71153563|sp|Q5HFD2|SYH_STAAC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123291784|sp|Q2FXU4|SYH_STAA8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123722375|sp|Q2FG96|SYH_STAA3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123740966|sp|Q2YT99|SYH_STAAB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166228618|sp|A7X345|SYH_STAA1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|172048922|sp|A6QHH3|SYH_STAAE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189082313|sp|A6U299|SYH_STAA2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189082314|sp|A5ITF5|SYH_STAA9 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189082315|sp|A8Z2F8|SYH_STAAT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|2580436|dbj|BAA23141.1| histidyl-tRNA synthetase [Staphylococcus aureus]
 gi|13701429|dbj|BAB42723.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247403|dbj|BAB57793.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204750|dbj|BAB95446.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49242005|emb|CAG40702.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244907|emb|CAG43368.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284698|gb|AAW36792.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82656760|emb|CAI81189.1| histidyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87126115|gb|ABD20629.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203000|gb|ABD30810.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147741180|gb|ABQ49478.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946631|gb|ABR52567.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374545|dbj|BAF67805.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722084|dbj|BAF78501.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368665|gb|ABX29636.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724076|gb|EES92805.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257271449|gb|EEV03595.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275256|gb|EEV06743.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278256|gb|EEV08898.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281832|gb|EEV11969.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284005|gb|EEV14128.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257787676|gb|EEV26016.1| histidyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840147|gb|EEV64611.1| histidyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843913|gb|EEV68307.1| histidyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257845677|gb|EEV69709.1| histidyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257848248|gb|EEV72239.1| histidyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851073|gb|EEV75016.1| histidyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854449|gb|EEV77398.1| histidyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858066|gb|EEV80955.1| histidyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257861701|gb|EEV84500.1| histidyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257864337|gb|EEV87087.1| histidyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160918|gb|EEW45938.1| histidyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259163271|gb|EEW47830.1| histidyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075546|gb|ACY11519.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941116|emb|CBI49502.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282313564|gb|EFB43959.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317215|gb|EFB47589.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282319386|gb|EFB49738.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282321617|gb|EFB51942.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282324962|gb|EFB55272.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327214|gb|EFB57509.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331329|gb|EFB60843.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282590073|gb|EFB95155.1| histidyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594528|gb|EFB99513.1| histidyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282595829|gb|EFC00793.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282764453|gb|EFC04579.1| histidyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283460852|gb|EFC07942.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283470907|emb|CAQ50118.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
 gi|283790540|gb|EFC29357.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817313|gb|ADC37800.1| Histidyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|290920336|gb|EFD97402.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095175|gb|EFE25440.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466891|gb|EFF09411.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|294824686|gb|EFG41109.1| histidyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968499|gb|EFG44523.1| histidyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295128564|gb|EFG58198.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296887666|gb|EFH26564.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177316|gb|EFH36568.1| histidyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|298694910|gb|ADI98132.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300885977|gb|EFK81179.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302751459|gb|ADL65636.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340709|gb|EFM06641.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312437902|gb|ADQ76973.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|312830017|emb|CBX34859.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315129915|gb|EFT85905.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315195533|gb|EFU25920.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|315198669|gb|EFU28997.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140482|gb|EFW32336.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144021|gb|EFW35790.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323440816|gb|EGA98525.1| histidyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442835|gb|EGB00460.1| histidyl-tRNA synthetase [Staphylococcus aureus O46]
 gi|329314305|gb|AEB88718.1| Histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727688|gb|EGG64144.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329728443|gb|EGG64880.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 420

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 99/464 (21%), Positives = 184/464 (39%), Gaps = 50/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++ +    I + +  +   Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K     I    +        E +  
Sbjct: 122 RQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +  ++E        D   +     +++L  +   D     T            +  FL
Sbjct: 182 HFEPVIHEF-----CSDCQSRLHTNPMRILDCKVDRDKEAIKT---------APRITDFL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + +    ++   +                                   +VRGL+YYT 
Sbjct: 228 NEESKAYYEQVKAYLDDL-----------------------GIPYIEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++A   
Sbjct: 265 TAFELMMDNPNYD-----GAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLA-LE 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E    +I+E   + I TM   +D           LR  GI+A+      +    Q+K A
Sbjct: 319 EEGIELDIEENLDLFIVTMGDQADR--YAVKLLNHLRHNGIKADKDY-LQRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           DR      I+ G  E     + +K++  G+  + E+     + +
Sbjct: 376 DRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFK 419


>gi|313891371|ref|ZP_07824987.1| histidine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313120146|gb|EFR43322.1| histidine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 418

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 103/462 (22%), Positives = 181/462 (39%), Gaps = 58/462 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +  RG  D   + I     +   IR I + YGF  I TP+ E ++   + + D  D   K
Sbjct: 2   KKIRGTQDILPENIYKWQYLEREIRQICDLYGFKEIRTPIFEATELFLRGIGDTTDVVTK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQ 127
            +++  D  G+ I+LR + TA + R   EN         + + IG +FR ++   GR+R+
Sbjct: 62  EMYTFNDRGGRSITLRPENTAAVVRSYLENKMYADNTTHKLFYIGSMFRYDRPQAGRYRE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI----GINNRKILDGILEKIG 183
           F Q  ++ +GS     DAE+  +     + +G+K    HI     I  RK+    L    
Sbjct: 122 FHQFGLEALGSDNPYVDAEVIDLAVQFFKDLGLKELKLHINSVGHIECRKVFHEKLIAFL 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D+L          D   +     +++L  +  T              +    +V  
Sbjct: 182 EPKKDEL--------CEDCNTRLYKNPLRVLDCKNTT---------CKRIIDGAPNIVDC 224

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D  +   +L   +          +EL                  +   +VRGL+YYT
Sbjct: 225 LCDDCSEKFEKLKTYL----------DEL-------------GIEYIVDPLLVRGLDYYT 261

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +         +      ++ GGGRYDGLV+   G  VP  GF+IG+ RL++AL+
Sbjct: 262 NTAFEIMY--------EPLGAQSTICGGGRYDGLVNEIGGIQVPGIGFAIGMERLVLALE 313

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                     E     +       +++ K     + LR   I   + +   K+  + LK 
Sbjct: 314 KQNLFPEVKNEN---QVFIATVGENAIIKGVGIVKALRREQIHVGIAM-QGKSLKSLLKQ 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           AD+      +I G  E  +G   +K++   ++   + ++   
Sbjct: 370 ADKEKYQFVLIIGEDELQKGKAILKNMETKEQKEIDFESIVE 411


>gi|260221252|emb|CBA29630.1| Histidyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 437

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 95/477 (19%), Positives = 186/477 (38%), Gaps = 59/477 (12%)

Query: 1   MGKKTKL----RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           M +K       +    +G  D    E      +   +R++   + F+ + TP++E +   
Sbjct: 1   MSEKNSPRKADKIVAVKGMNDIMPPESAAWEALEARVRDLMRRFAFENVRTPIVEPTSLF 60

Query: 57  GKFLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            + L +  D   K ++S +D  +G+ ++LR + TA + R   E+      P R Y +GP+
Sbjct: 61  VRGLGEVTDIVEKEMYSFEDRLNGEALTLRPENTAGVVRAAVEHSMLYNGPKRLYYMGPM 120

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           FR+E+   GR+RQF Q   + +G      DAE+ +M     + +G+              
Sbjct: 121 FRHERPQRGRYRQFHQIGAEALGFGGAEIDAEVILMAHMLWKELGLT------------D 168

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           ++  +  +G   +  L+   ++      LD    +  + L                 +  
Sbjct: 169 IELQINSLGQPDERNLHRAALIQHFELHLDLLDEEAKRRLHLNPLRLLDSKNPGMQGVI- 227

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E    ++ FL     + +  + +++                               ++  
Sbjct: 228 ESAPKLIDFLGDASREHLETVKKILDAH-----------------------RVSYTVNPR 264

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRG++YY   V+E +          K    G+V  GGRYD L+ +  G+  PA G+++G
Sbjct: 265 LVRGMDYYNLTVFEFVTT--------KLGSQGTVCAGGRYDYLIEQIGGKPAPAVGWAMG 316

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + R++  +K    +         + +  +  D  +L       Q+LR AG+  +M   +S
Sbjct: 317 VERVLELIKESGVALMQ----PGLDVFAVITDVANLQAVMPSLQVLREAGLSVQMQASTS 372

Query: 415 ---KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESW 466
               +  +Q K AD      A + G  E + G + +K L      + +  I    SW
Sbjct: 373 EGMPSMKSQFKRADASGARFAFVFGPDELASGQVTVKSLRDSNVPQATLRIDEMASW 429


>gi|302333304|gb|ADL23497.1| histidyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 420

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 99/464 (21%), Positives = 184/464 (39%), Gaps = 50/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++ +    I + +  +   Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K     I    +        E +  
Sbjct: 122 RQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +  ++E        D   +     +++L  +   D     T            +  FL
Sbjct: 182 HFEPVIHEF-----CSDCQSRLHTNPMRILDCKVDRDKEAIKT---------APRITDFL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + +    ++   +                                   +VRGL+YYT 
Sbjct: 228 NEESKAYYEQVKAYLDDLGIA-----------------------YIEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++A   
Sbjct: 265 TAFELMMDNPNYD-----GAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLA-LE 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E    +I+E   + I TM   +D           LR  GI+A+      +    Q+K A
Sbjct: 319 EEGIELDIEENLDLFIVTMGDQADR--YAVKLLNHLRHNGIKADKDY-LQRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           DR      I+ G  E     + +K++  G+  + E+     + +
Sbjct: 376 DRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFK 419


>gi|45359177|ref|NP_988734.1| histidyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|46396586|sp|P60921|SYH_METMP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|45048052|emb|CAF31170.1| histidyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 416

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 112/458 (24%), Positives = 187/458 (40%), Gaps = 49/458 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P+G  D   +E++ R  I   +R ++++Y F  I TP  E  + L K   DE R   
Sbjct: 2   FQKPKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRT-- 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F  +D   + + LR +LT+ +AR+    F     P + Y     FR E    GR+R+F
Sbjct: 60  QLFVFRDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +GS    ADAE+  M  + L+ + +   D+ I I +  +L G+ EK  L  D+
Sbjct: 120 WQMGSELIGSKKPIADAEVVNMAIEGLKEINM---DFEIHIGHLGVLKGVFEKYNLSDDE 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS--EQIDIMVSFLSI 246
                                 ++ L+ +   D               E    +   L +
Sbjct: 177 G-------------------NEIRRLIDKEDMDGLKSVLSRLESEKNIEISKKVFEVLDL 217

Query: 247 DLEKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              K  +  L E +    +       L  I E V       +   I+  I RGL+YYTG 
Sbjct: 218 KGGKEVIPILKEKLADFESSVAALENLDSILEFV------PHDYVINFGIARGLDYYTGM 271

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            K      V GGGRYD L+  F+G+  PA GF+ G  R+++ +   
Sbjct: 272 VFEVY---------GKKEGAKQVCGGGRYDNLIELFEGEPSPAVGFAYGFDRIMLNIDDF 322

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           E       E   + +  +      L +     + LR +G   E+ L   +     L YA+
Sbjct: 323 EV------ENESIFVVPVKSSEMLLKECLKIAKTLRDSGKSVEVDL-MGRKLNKALNYAN 375

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +N    +I G  +   G + +K++  G++   E+K+ 
Sbjct: 376 TKNIKKVLIVGENDIRDGKVSLKNMETGEQSLIELKDI 413


>gi|329733116|gb|EGG69453.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 420

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 99/464 (21%), Positives = 184/464 (39%), Gaps = 50/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++ +    I + +  +   Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K     I    +        E +  
Sbjct: 122 RQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +  ++E        D   +     +++L  +   D     T            +  FL
Sbjct: 182 HFEPVIHEF-----CSDCQSRLHTNPMRILDCKVDRDKEAIKT---------APRITDFL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + +    ++   +                                   +VRGL+YYT 
Sbjct: 228 NEESKAYYEQVKAYLDDL-----------------------DIPYIEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++A   
Sbjct: 265 TAFELMMDNPNYD-----GAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLA-LE 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E    +I+E   + I TM   +D           LR  GI+A+      +    Q+K A
Sbjct: 319 EEGIELDIEENLDLFIVTMGDQADR--YAVKLLNHLRHNGIKADKDY-LQRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           DR      I+ G  E     + +K++  G+  + E+     + +
Sbjct: 376 DRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFK 419


>gi|58337235|ref|YP_193820.1| histidyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227903819|ref|ZP_04021624.1| histidyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|75507609|sp|Q5FKI5|SYH_LACAC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|58254552|gb|AAV42789.1| histidyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227868706|gb|EEJ76127.1| histidyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 428

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 108/465 (23%), Positives = 179/465 (38%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D    +     ++ ++ RN +    +  I TP  E  +   +   D  + 
Sbjct: 1   MRVQKPKGTVDILPDQSSSWQKVEETARNFFNRANYREIRTPSFENYEIFSRSSGDSSEI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   E+         P   + +   FR E+   
Sbjct: 61  VEKQMYDFNDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GSS   AD +  MM  D L  +G+K    HI        RK     
Sbjct: 121 GRQREFHQIGVESFGSSNPLADVQTIMMGHDLLAELGVKNYQLHINTLGNEQVRKDYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D                 
Sbjct: 181 LVNYFTPVKDELSE--------DSQRRLRDNPLRILDSKDERDKKF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  D + +   + +++          ++L                       VRG
Sbjct: 224 KIREFLDDDTKNNFESILKMLDQLGIDYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRYD LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDKSLWESAT-----TILGGGRYDHLVEEFNGPATPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+    +         +     +    +  K    T+ LR  G  A+  + + K   
Sbjct: 316 MLVLEKQNPALFESNS---IDFFIANIGEGTAQKAIEITRSLRKQGFEADFDV-NQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q K ADR +    I  G  E   G+L IK L+ GK +   +++ 
Sbjct: 372 AQFKKADRDHAKYVITLGEKELENGVLNIKRLSDGKTIDLSLEDI 416


>gi|330957528|gb|EGH57788.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 429

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 98/487 (20%), Positives = 181/487 (37%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E++D   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +G                   
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGLLGIRDAVKLELNSLGTSEARG 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +     +      
Sbjct: 177 RYRDALVEFLSAHLDQLDE------------DSQRRLKTNPLRVLDTKHPETQAVLV--- 221

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +  +L  +       L   +                              
Sbjct: 222 ------NAPKLADYLDDESRVHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++GI RL++ L++LE     I     V +      ++         + +R     +R 
Sbjct: 305 GFAMGIERLVLLLETLEQVPEEIARQVDVYLCAFGDAAEL--AGLTLAEKVRDQLPNLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALLEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|33864733|ref|NP_896292.1| histidyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|39932069|sp|Q7U9Q6|SYH_SYNPX RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|33632256|emb|CAE06712.1| histidyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 430

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 98/469 (20%), Positives = 190/469 (40%), Gaps = 54/469 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   + ++    +    R  +   GF  I TPLLE +D   + + +  D  
Sbjct: 3   QLQSLRGMVDLLPETLQCWQAVEAVAREHFRRSGFGEIRTPLLETTDLFCRGIGEGTDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S  D   +  +LR + TA + R   ++        + +  GP+FR E+   GR R
Sbjct: 63  GKEMYSFTDRGERACTLRPEGTASVVRAALQHGLLSQGAQKLWYAGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLH 185
           QF Q  V+ +G+ +  +D E+  +  D L  +G+   +  I      +        +   
Sbjct: 123 QFHQIGVEWLGAESARSDVEVIALAWDLLAQLGVGGLELEINSLGTPEDRQAYRTALVAW 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + +L++     RA     +     +++L  +          K      EQ   +   LS
Sbjct: 183 LEQRLDQLDDDSRA-----RLSTNPLRILDSKN---------KDTQALLEQAPTLADALS 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +  +    + + +                              +++  +VRGL+YY   
Sbjct: 229 SESRQRFDAVQQGLTAL-----------------------GIPFRLNPRLVRGLDYYGHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E            +     +V GGGRY+GL+++  G   PA G+++G+ RL++ L++ 
Sbjct: 266 AFEIT--------SDQLGAQATVCGGGRYNGLIAQLGGAPTPAIGWALGMERLLLVLEAA 317

Query: 366 ESSTNNIKEMGPV-----LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            ++  +      V         ++    + +     T+ LR AG+  E+  GS   FG Q
Sbjct: 318 ATADPDGAAARLVATSAPDAYVINRGDQAETMALTLTRGLRAAGLAVELD-GSGSAFGKQ 376

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWRE 468
            K ADR     A++ G  E +R  +++K L  +G++ S  + +  +  E
Sbjct: 377 FKRADRCGARWALVLGDDEAARAEVRLKPLQHEGEDRSWAVADIAAIVE 425


>gi|253996240|ref|YP_003048304.1| histidyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982919|gb|ACT47777.1| histidyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 422

 Score =  243 bits (619), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 101/473 (21%), Positives = 181/473 (38%), Gaps = 71/473 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  +GF D   +   +  ++ D+ R +   YG+  I  PL+E +D   + + +  D  
Sbjct: 4   KFQSIKGFYDILPEATPLWFKLEDTARRVLSQYGYKNIRMPLVESTDLFVRSVGEHTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++ +D  +G  ++LR + TA   R V EN  T   P R +  G +FR+E    GR 
Sbjct: 64  EKEMYAWEDALNGDKLTLRPEGTAGCVRAVVENNLTYNGPVRLWYSGAMFRHENVQKGRQ 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDG 177
           RQF Q  V+  G +    DAE  +++A     +G            D H     R +L  
Sbjct: 124 RQFHQIGVEAFGFNTPEVDAEQIVLLARLWRELGIADVELQINSIGDAHERAEYRNVLIA 183

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             E+     D+            D   +     +++L  +     +           E  
Sbjct: 184 YFEQHADLLDE------------DAKRRLHTNPLRILDTKNPRMQAMC---------EAA 222

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++  L  +       L + +                               I+  +VR
Sbjct: 223 PKLLDCLGAETRAHFEGLCKRLNDAGVA-----------------------YTINPRLVR 259

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +          K    G++ GGGRYD LV R  G   PA GF IG+ R
Sbjct: 260 GLDYYNRTVFEWVTT--------KLGAQGTIAGGGRYDSLVERLGGDATPACGFGIGLER 311

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           + + ++        +       +  ++    + +      + LR A I+  +      +F
Sbjct: 312 VFLLMQE-----YQVVADDAPDVYLVNVGEQAEAAAFGIAERLRNANIQV-ILHAGGGSF 365

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL---AKGKELSREIKNNESWR 467
            +Q+K ADR     A+I G  E +   + +K L    KG++    ++   ++ 
Sbjct: 366 KSQMKKADRSRAKYAVILGDDEVANNEVALKPLLATVKGEQQKLSVEAAVTYL 418


>gi|113460551|ref|YP_718615.1| histidyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123132004|sp|Q0I2E8|SYH_HAES1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|112822594|gb|ABI24683.1| histidyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 425

 Score =  243 bits (619), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 96/481 (19%), Positives = 195/481 (40%), Gaps = 64/481 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   + + +R++ + YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCSPTESLLWQWVEEKVRSVLQTYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ ++ A   + +GI  +   + +N+   L+   
Sbjct: 116 PQKGRYRQFHQAGVEVFGIANPEIDAELILLTARLWKQLGIF-DHVTLQLNSIGSLES-- 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +       +  ++   L + ++ ++     +++L  + +                    
Sbjct: 173 RQNYRSALVEFLQQHTDLLSEEEKERLVKNPLRILDTKNQV---------LQEVLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +  +   +L +L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDQESREHFSQLCDLLDA-----------------------VGIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G    + GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATCSVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE------MFLGS 413
           + ++ +            V I  +     +        +      IR E      M    
Sbjct: 313 LLVQEVNKQIVLPSA---VDIYVVYFGEKTTLPAFQLAEK-----IRTELPHLRTMTHCG 364

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARVA 472
             NF  Q K AD+     A++ G  E     + +KDL  G ++LS  + +   + +  + 
Sbjct: 365 GGNFKKQFKRADKVGAKFALVIGETEVKTQQVVVKDLLGGAEQLSLALTDVVIYLKQAIT 424

Query: 473 Q 473
           Q
Sbjct: 425 Q 425


>gi|307610243|emb|CBW99804.1| histidyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 426

 Score =  243 bits (619), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 90/466 (19%), Positives = 184/466 (39%), Gaps = 51/466 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D       +   I  +  N    YG+  I  P++E +    + + +  D  
Sbjct: 5   KIQAIRGMNDILPDSTSVWRFIEQTFINCLVRYGYKEIRFPIVENTQLFKRTIGEITDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  I+LR + TA   R   E+        + + +GP+FR+E+   GR+R
Sbjct: 65  EKEMYTFNDLNGDSITLRPEGTAGCVRACIEHGLLHNQQQKLWYLGPMFRHERPQKGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+ +G +    + E+  +       +G                           
Sbjct: 125 QFNQFGVEALGITGTAIELELISICRRLWTDLGFS------------------------- 159

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID-IMVSFLS 245
                 + + L+     +    Q  + +L E   D+     + +    ++    ++   +
Sbjct: 160 ------QSVQLQVNSLGEINERQKYRSILVEYLRDHFQILDEDSKRRLDKNPLRVLDSKN 213

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL++ +    +L+   + G+            +   G       I+  +VRGL+YY   
Sbjct: 214 PDLQQLIQNAPKLID--VLGDDSREHFQSFCNGLETLGIP---YSINPVLVRGLDYYGQT 268

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +     ++  GGRYD LV    G   PA GF++G+ R+ + +++L
Sbjct: 269 VFEWVT--------DQLGSQATICAGGRYDMLVEFLGGAPTPAVGFALGLERIFLLMETL 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQLKYA 424
                +  +     I  +  + +++ K  +  + +R A    ++    +   F +Q K A
Sbjct: 321 NLLNESNNKQS---IFIIATNEEAILKALVMAESIRNAHPSLDVITNTAGGGFKSQFKKA 377

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREA 469
           D+    LA+I G  E +R  + IKDL    +++S  +     + + 
Sbjct: 378 DKSGARLALILGEDEIAREYVSIKDLRTEIEQISIPMTKINEFLQD 423


>gi|54294413|ref|YP_126828.1| histidyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81679225|sp|Q5WWH1|SYH_LEGPL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|53754245|emb|CAH15722.1| histidyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 426

 Score =  243 bits (619), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 90/466 (19%), Positives = 184/466 (39%), Gaps = 51/466 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D       +   I  +  N    YG+  I  P++E +    + + +  D  
Sbjct: 5   KIQAIRGMNDILPDSTSVWRFIEQTFINCLVRYGYKEIRFPIVENTQLFKRTIGEITDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  I+LR + TA   R   E+        + + +GP+FR+E+   GR+R
Sbjct: 65  EKEMYTFNDLNGDSITLRPEGTAGCVRACIEHGLLHNQQQKLWYLGPMFRHERPQKGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+ +G +    + E+  +       +G                           
Sbjct: 125 QFNQFGVEALGITGTAIELELISICRRLWTDLGFS------------------------- 159

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID-IMVSFLS 245
                 + + L+     +    Q  + +L E   D+     + +    ++    ++   +
Sbjct: 160 ------QSVQLQVNSLGEINERQKYRSILVEYLRDHFQILDEDSKRRLDKNPLRVLDSKN 213

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL++ +    +L+   + G+            +   G       I+  +VRGL+YY   
Sbjct: 214 PDLQQLIQNAPKLID--VLGDDSREHFQSFCNGLETLGIP---YSINPVLVRGLDYYGQT 268

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +     ++  GGRYD LV    G   PA GF++G+ R+ + +++L
Sbjct: 269 VFEWVT--------DQLGSQATICAGGRYDMLVEFLGGAPTPAVGFALGLERIFLLMETL 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQLKYA 424
                +  +     I  +  + +++ K  +  + +R A    ++    +   F +Q K A
Sbjct: 321 NLLNESNNKQS---IFIIATNEEAILKALVMAESIRNAHPSLDVITNTTGGGFKSQFKKA 377

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREA 469
           D+    LA+I G  E +R  + IKDL    +++S  +     + + 
Sbjct: 378 DKSGARLALILGEDEIAREYVSIKDLRTEIEQISIPMTKINEFLQD 423


>gi|87118476|ref|ZP_01074375.1| histidyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86166110|gb|EAQ67376.1| histidyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 426

 Score =  243 bits (619), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 104/473 (21%), Positives = 187/473 (39%), Gaps = 59/473 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    +  +   +   +  + ++YG+D I  P++E +D   + + +  D  
Sbjct: 4   KIQAIRGMNDILPGQSSVWQYLEAKVAAVVDSYGYDQIRFPVVENTDLFKRGVGETTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  ++LR + TA   R   +         R + +GP+FR E+   GR+R
Sbjct: 64  EKEMYTFDDRNGDSLTLRPEGTASCVRAADQAGLLFNQVQRLWYVGPMFRYERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q  V+  G S+   DAE+ ++ A   + +G+  +     +       R+     L +
Sbjct: 124 QFHQIGVETFGMSSPDIDAELIILTARLWQQLGLLEHVELELNTIGTAAAREAYKAALVE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        D   +     +++L  +                      + 
Sbjct: 184 YLTQFKDELDE--------DSQRRLSSNPLRILDSKDARTQE---------ILNDAPDLA 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             +  +       L  ++       K  + L                       VRGL+Y
Sbjct: 227 DHIDDESRVEFERLQAILAANNVSFKLNSRL-----------------------VRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +                +V  GGRYDGLV +  G+  PA GF++GI RL++ 
Sbjct: 264 YGKTVFEWVTT--------HLGAQATVCAGGRYDGLVEQLGGKATPAVGFAMGIERLVLL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGN 419
           L++LE   ++ K    V I +M   ++         + LR A  G R     G   NF  
Sbjct: 316 LETLELIPDDAKPQTDVFIASMGEAAEL--ATFTLAERLREADKGWRILRHCGGG-NFKK 372

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           Q+K AD       +I G  E + G+ QIKD++ G++ +  I     +   +  
Sbjct: 373 QMKKADASGARFTLIMGDNEVAEGICQIKDMSTGEQKNCVIDAVADYLSTKDQ 425


>gi|296125535|ref|YP_003632787.1| histidyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296017351|gb|ADG70588.1| histidyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 415

 Score =  243 bits (619), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 105/466 (22%), Positives = 193/466 (41%), Gaps = 62/466 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           L  + PRG  D      +    I   I++I + YG+  I TPL EY+D   + + +  D 
Sbjct: 2   LDIKKPRGTNDFFYDSSKRLEFIESKIKDIVKLYGYGRIRTPLFEYTDLFTRGIGEGTDI 61

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGR 124
             K +F+ +D  G+ ++LR + TA +AR   EN     F     + +G ++R E+   GR
Sbjct: 62  VGKEMFTFEDRGGRSLTLRPEGTASVARAYVENSMQNEFAINKLFYLGTMYRAERPQKGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILE 180
           +R+F Q  V+ +G ++   DAE+ ++  + L+  GI       +       +   +  L+
Sbjct: 122 YREFNQFGVECIGGTSPLIDAEIILLNINVLKEFGIDNVNLLINTVGCSKCKPSYNNALK 181

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D+L E                +G  L + + + +   +  K        I   
Sbjct: 182 EAIGSRKDELCETCQKRY----------EGNILRILDCKNEKCKETIKD-------IPKF 224

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             ++  + ++                K  +EL  I +             +   +VRGL+
Sbjct: 225 YDYVCDECKEHFD-------------KLCDELTRIGQ----------NFTVDHMLVRGLD 261

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG-QNVPATGFSIGISRLI 359
           YYT   +E                  ++ GGGRYD L+  F   ++VPA G ++GI RL+
Sbjct: 262 YYTKTAFEVQTNA--------LGAQSAILGGGRYDNLIGLFNNGKDVPAVGSAMGIERLL 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L+S  +   +  ++  V         ++ +      Q LR   I  +      K+  +
Sbjct: 314 LVLESQNNIITDRLDVFIVAF------KETENNVLKVMQTLRANNISCDYDFAC-KSVKS 366

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           Q K A++RN   A++ G  E  R M ++K++  G+E    + +  S
Sbjct: 367 QFKSANKRNAKYALVLGEDELKREMCKLKNMDTGEEKEVSLNDIHS 412


>gi|325577797|ref|ZP_08148072.1| histidine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160542|gb|EGC72668.1| histidine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 423

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 105/490 (21%), Positives = 191/490 (38%), Gaps = 72/490 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +R I  +YG+  +  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDCSPTESPLWQWIEGQVRQILSSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ ++ A   +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEVFGIATPEIDAELIILTARLWKALGI---DQHVSLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E    L + ++ ++     +++L  + +               +    
Sbjct: 173 RANYRSALVAFLENHQDLMSEEEKERLVKNPLRILDTKNQALQD---------VLDGAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +  +   +L  L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDDESREHFAQLCGLLDA-----------------------VGIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATSGVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     +I     V I  +     +      + + LR+    +   M   S  NF
Sbjct: 313 LLVQEVNK---SIPVKSAVDIYVVYQGEGTTLAAFQFAEKLRSELPHLST-MLHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q K AD+    LA++ G  E     + +K L                      Q TI 
Sbjct: 369 KKQFKRADKSGATLALVLGESEVQNNQVVVKHL-----------------LGAAEQQTID 411

Query: 478 ISELVSTVKK 487
           +S L+  VK 
Sbjct: 412 VSNLIEHVKA 421


>gi|300858582|ref|YP_003783565.1| histidyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686036|gb|ADK28958.1| Histidyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302206294|gb|ADL10636.1| Histidyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|302330851|gb|ADL21045.1| Histidyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308276536|gb|ADO26435.1| Histidyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 423

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 98/473 (20%), Positives = 177/473 (37%), Gaps = 68/473 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K       P+G  D           + D+  +     G++ IE P+ E +    + +
Sbjct: 1   MNTKKPQIISAPKGVPDYIPPVSPAFLGVRDTFAHQAHLAGYEHIELPVFEETTLFARGV 60

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D   K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 61  GESTDVVTKEMYTFADRGERSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLKYYGPFFRYE 120

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +   +L+A+G            D      
Sbjct: 121 RPQAGRYRQLQQVGVEAIGIDDPALDAEVIALADRSLKAIGLQGYRLELTSLGDGSCRPA 180

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   L  + L  + +    +  LR +D         V+ +  +             
Sbjct: 181 YRQKLQDFLFSLPLDEETRRRAEINPLRVLDDKRP----EVRDMTAD------------- 223

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   +M+  LS +  +    +  L+                              +
Sbjct: 224 ------APLMLDNLSSECREHFETVTGLLDDLGVA-----------------------YE 254

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +   G
Sbjct: 255 INPRMVRGLDYYTKTTFEFV--------HDGLGTQSGIGGGGRYDGLMAQLGGQELSGIG 306

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           +++G+ R ++AL+S E +  +      V +  +     +          LR  GI A+M 
Sbjct: 307 YALGVDRCLLALQSEEKTITDGSR---VAVFGVPMGEQAKRSMVSIVDKLRAQGIPADMS 363

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            G  +     +K ADR      ++ G  E   G++ +KD+   ++    I   
Sbjct: 364 YG-DRGLKGAMKGADRSGARFTLVLGDRELEHGVVAVKDMVSKEQRDIAIDEL 415


>gi|295426088|ref|ZP_06818758.1| histidine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064257|gb|EFG55195.1| histidine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 428

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 110/465 (23%), Positives = 178/465 (38%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D          ++  +  N ++   +  I TP+ E  +   +   +  D 
Sbjct: 1   MRVQRPKGTVDILPGTSDSWEKVEQTASNFFKRANYREIRTPMFENYEVFARSSGESSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   EN         P   + I P FR E+   
Sbjct: 61  VEKEMYDFDDKGGRHIALRPEGTAGVVRAYVENKLYGPEIVKPFNVFYIDPTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GSS+  AD E  MM  D L  +G+K  + HI        RK     
Sbjct: 121 GRQREFHQIGVESFGSSSPLADVETIMMGHDLLAELGVKNYELHINSLGNAAVRKAYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +  +  +++L  +   D                 
Sbjct: 181 LVDYFTPLKDQLSE--------DSQRRLSMNPLRILDSKAEEDQKF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  D +K+   +   +          ++L                       VRG
Sbjct: 224 KIREFLDDDAKKNFETITNTLTQLGIDYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRYD LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVADKKLWESAT-----TILGGGRYDHLVEEFGGPATPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK    +         +     +    +  K     ++LR  G + +  +   K   
Sbjct: 316 MLVLKEQNPALFEDN---GIDFFITNIGEGTEMKTVEIARLLRKQGFKTQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q + A+R +    I  G  E   G L IK LA GK +   + + 
Sbjct: 372 QQFRKANRVHAKYVITLGAKELENGTLNIKRLADGKTIDLSLDDL 416


>gi|11499232|ref|NP_070470.1| histidyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3334353|sp|O28631|SYH_ARCFU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|2648908|gb|AAB89600.1| histidyl-tRNA synthetase (hisS) [Archaeoglobus fulgidus DSM 4304]
          Length = 409

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 112/457 (24%), Positives = 191/457 (41%), Gaps = 53/457 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E PRG  D    E+  R  I   +R I E++G+  + TP  EY +   +   +    
Sbjct: 1   MKIERPRGTRDFLPDEMERRREIEKRMRKIAESFGYREVATPTFEYLELFTRKSGEGII- 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + ++  +D  G+ ++LR +LTAP+ R        +  P R Y     FR E+   GR+R
Sbjct: 60  -EEMYVFKDKSGRDLALRPELTAPVMRMFVNECSVMPKPLRFYYFANCFRYERPQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +GS +  ADAE+ ++    L+ VG+   ++ + I +  I+  +L+ IG   
Sbjct: 119 EFWQFGVELIGSESYLADAEVIILADKILKDVGV---NFSLEIGHVGIMRHLLKPIGEDR 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K                     V  L+ +G  +    +     +  +  D + S L +
Sbjct: 176 ASK---------------------VMRLIDKGDREGLESYLAEIRVNEDLRDKIFSLLEL 214

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             ++S+ E  + +     G      L  +S L+R  G +     ++  I RGL+YYTG V
Sbjct: 215 KGDESVIEEAKEIIDYDFG-----HLESLSALLRDVGVD---FTLNLGIARGLDYYTGVV 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E           +       V GGG Y+ L S F G   P+TGF+IG  R+  A     
Sbjct: 267 FECY--------AEGLGAQKQVCGGGSYE-LSSLFGGPVTPSTGFAIGFDRVCEA----- 312

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  E G   +  +       S+      MLR  G  A + +   +N   Q+ +A  
Sbjct: 313 ----CSVEAGEKSVVAVVSFKGLESQAFRVASMLRERGFTAVVDV-MGRNLKKQMSFASE 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
                A+I G  E   G + IK+L   +++    +  
Sbjct: 368 MGVKYAVILGPDEVKSGRVAIKNLETQEQVVVAEEEL 404


>gi|116492878|ref|YP_804613.1| histidyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265658|sp|Q03F51|SYH_PEDPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116103028|gb|ABJ68171.1| histidyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 424

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 95/466 (20%), Positives = 176/466 (37%), Gaps = 49/466 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G AD      +    +  + R  +  Y ++ I TP+ E  +   +   D  D 
Sbjct: 1   MKYQKPKGTADILPPFSKEWQFVEQNARETFALYNYEEIRTPIFEKFEVFSRSAGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VTKEMYDFDDKGGRHIALRPEGTAGVVRAFVENKLYGPEHQKPVKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS +   D E  MM  D L+ + +      I     K       + 
Sbjct: 121 GRLREFHQIGVEAFGSDSPKIDVETIMMGMDFLKKLKVSGLKLVINTLGDKESRDRYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +   E L    + D   +     +++L  + + D             E    ++ 
Sbjct: 181 LIDYLEPHFEEL----SDDSKARLHKNPLRVLDSKDKNDQK---------IVENAPEILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ D +K    + E +                               + S++VRGL+YY
Sbjct: 228 FLTEDAQKHFTSVKEELDTLGVD-----------------------YVVDSSMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E ++    + +        ++  GGRY+GLV    G  V   GF +G+ RL++  
Sbjct: 265 NHTIFEIMIADSPLGKGD-----VTICAGGRYNGLVEELGGPEVSGVGFGLGVERLLL-- 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L + T    +   +    +       +        LR      E      +    Q K
Sbjct: 318 -LLNAETQTTLQSKQLDFYVVGIGDLVQNDVLKVVHELRQMNFVTEQDY-LDRKPKAQFK 375

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            AD+ N    +  G  E +  + ++KD+  G+E +  +    + ++
Sbjct: 376 SADKLNAKYVVTIGESEMNDRIFKLKDMHSGEERTVALSEINTLKD 421


>gi|86157935|ref|YP_464720.1| histidyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774446|gb|ABC81283.1| histidyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 426

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 88/459 (19%), Positives = 170/459 (37%), Gaps = 51/459 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    ++   + +    R+++  YG+  + TP +E++    + + +  D  
Sbjct: 14  KINGVKGMNDVLPADVARWHEMESVARDVFALYGYREVRTPAVEHAALFARGVGEATDIV 73

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           NK ++  +D   + ++LR + TA   R   E+   +  P + + +GP+FR E+   GR+R
Sbjct: 74  NKEMYVFEDKGEELLALRPEGTAGTVRAFIEHGAFVEGPQKWFYMGPMFRRERPQKGRYR 133

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   +  G +    DAE   ++AD    +G+        + + +     L  +  + 
Sbjct: 134 QFHQIGCEAFGVAEPYLDAEQIALLADYFARLGVTAELKLNSVGDAQCRPAYLADLKAYL 193

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                         D  D+     +++L  +          +      E+   ++  L  
Sbjct: 194 -----VSNQGALCADCKDRIERNPLRVLDCK---------VESCQPVLEKAPRLLERLCE 239

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                  ++   +                              ++   +VRGL+YY    
Sbjct: 240 PCRTHFDQVKAGLDALGVA-----------------------YRVEPRLVRGLDYYVRTA 276

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           YE                  +V GGGRYD LV    G   P  GF++G  RL + L+ + 
Sbjct: 277 YEFT--------SDALGSQSAVAGGGRYDRLVETLGGPPTPGIGFALGEERLSMILEKVG 328

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +    +      +  +  D+    +       LR AGI  E+     K    Q K A+R
Sbjct: 329 RAAPERRP----AVFFVSADATGALEALRLAAALRRAGIACELDPRGGK-MKAQFKQAER 383

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
                A++ G  E + G  ++KDL   +E    + +  +
Sbjct: 384 VGARWAVVLGGNEVATGQAKLKDLQTREETPIALSDLAA 422


>gi|226492078|ref|NP_001150679.1| histidyl-tRNA synthetase [Zea mays]
 gi|195641024|gb|ACG39980.1| histidyl-tRNA synthetase [Zea mays]
          Length = 485

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 108/454 (23%), Positives = 198/454 (43%), Gaps = 39/454 (8%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            PRG  D P +++R+R  + D  R +     F+ ++ P+LE      +   +E    + +
Sbjct: 71  PPRGTRDFPPEDMRLRTWLFDQFREVSRLMAFEEVDFPVLESEALFIRKAGEE--ITQQL 128

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +D  G+ + LR ++T  LAR V +   ++  P + + IG  +R E+   GR R+  Q
Sbjct: 129 YNFEDKGGRRVVLRPEITPSLARLVIKQGKSVSLPLKWFTIGQCWRYERMTRGRRREHYQ 188

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
            ++D  G     A+AE+   +    + +GI  +D  I + +RK+L  +L    +      
Sbjct: 189 WNMDIFGVPKVRAEAELLHAIVLLFQRLGITSSDVGIRVXSRKVLXAVLNMYSIPE---- 244

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
           +    V   +DKL K   + ++  L                L+SE +  ++  LSI    
Sbjct: 245 HLFTQVCVIVDKLGKMTREEIEKELVST------------GLSSEAVQGIIDVLSIKSLS 292

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E+        +  +   +L  +     + GY ++ I   +++VRGL YYTG V+EA 
Sbjct: 293 KLEEVL------GSDVEAVADLKKLFSFAEQYGY-ADWICFDASVVRGLAYYTGIVFEAF 345

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                     +     ++ GGGRYD L+S F  +++PA GF  G + ++  LK      +
Sbjct: 346 ---------DREGKLRAICGGGRYDRLLSTFGSEDIPACGFGFGDAVIVELLKEKGLLPD 396

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
             +++          D +           LR  G   ++     K      K+A+R N  
Sbjct: 397 MSRQIDD---IVFPLDEELEGPASSIASSLRKKGRSVDLV--EDKRLKWVFKHAERINAS 451

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
             I+ G  E  RGM+++K L+  +E   +    E
Sbjct: 452 RLILVGNSEWERGMVRVKVLSTREEFEVKTSELE 485


>gi|315056411|ref|XP_003177580.1| histidyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311339426|gb|EFQ98628.1| histidyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 524

 Score =  242 bits (618), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 117/535 (21%), Positives = 213/535 (39%), Gaps = 74/535 (13%)

Query: 1   MGKKTK--LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M  K K     + P+G  D    +  +R+ I  +I N+++ +G   ++TP+ E  + L  
Sbjct: 1   MAPKGKTSFTLKTPKGTKDWAGPDALLRDNIFSTITNVFKRHGGMALDTPVFELREILAG 60

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ LQD  G+  SLRYDLT P AR++A N  T +   + Y +  V+R +
Sbjct: 61  KYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMN--TDIRNIKRYHLAKVYRRD 115

Query: 119 KH----GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           +     G  R       D+         AD+E+  +  +  + +G  + +Y I IN+RKI
Sbjct: 116 QPAMTKGRMREFYQCDFDIAGAQFDPMVADSEVLKIATEVFDDLG-WKGNYTIKINHRKI 174

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           LDG+ E  G+  D    +   +  A+DKLDK   + V+  + +              L  
Sbjct: 175 LDGLFEVCGVPQD----KIRTISSAVDKLDKLPWEDVRKEMVDE-----------KGLDG 219

Query: 235 EQIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
              D + +++     + + E     E +    + + G +++ ++   +   G   ++   
Sbjct: 220 AVADNIETYVVRKGGRDLLESLLADEKLTANASAKAGLDDMALLLGYLEDFGVL-DKFSF 278

Query: 292 SSTIVRGLEYYTGCVYEAI---------------------------LGFPVMNEKQKPVV 324
             ++ RGL+YYTG +YE I                           +           V 
Sbjct: 279 DMSLARGLDYYTGVIYEVITEGSAPATATSAPEAQKLQRQAKKDKKVDADEDRSNDPSVG 338

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
            GSV  GGRYD LV  F  +              I ++        +      V +  M 
Sbjct: 339 VGSVAAGGRYDDLVGMFSPKAQIPCVGISFGVDRIFSITKARMQRESKLRNSEVDVYVMA 398

Query: 385 HDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
                    L +     + L  AGI+AE           Q K A+    P A+I G  E 
Sbjct: 399 FGGKGFTGLLKERMQICKSLWEAGIKAEFLYKVKPKLPAQFKAAEANLVPFAVILGEDEL 458

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           + G +++K++         + +    +E  +    + I+ L + +K+ L++   E
Sbjct: 459 AAGKVRVKEM--------GLPDGHPEKEGLL----VDIASLTTEIKQRLEKKANE 501


>gi|9955267|pdb|1QE0|A Chain A, Crystal Structure Of Apo S. Aureus Histidyl-Trna
           Synthetase
 gi|9955268|pdb|1QE0|B Chain B, Crystal Structure Of Apo S. Aureus Histidyl-Trna
           Synthetase
          Length = 420

 Score =  242 bits (618), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 99/464 (21%), Positives = 184/464 (39%), Gaps = 50/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++ +    I + +  +   Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K     I    +        E +  
Sbjct: 122 RQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +  ++E        D   +     +++L  +   D     T            +  FL
Sbjct: 182 HFEPVIHEF-----CSDCQSRLHTDPMRILDCKVDRDKEAIKT---------APRITDFL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + +    ++   +                                   +VRGL+YYT 
Sbjct: 228 NEESKAYYEQVKAYLDDL-----------------------GIPYTEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++A   
Sbjct: 265 TAFELMMDNPNYD-----GAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLA-LE 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E    +I+E   + I TM   +D           LR  GI+A+      +    Q+K A
Sbjct: 319 EEGIELDIEENLDLFIVTMGDQADR--YAVKLLNHLRHNGIKADKDY-LQRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           DR      I+ G  E     + +K++  G+  + E+     + +
Sbjct: 376 DRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFK 419


>gi|320161174|ref|YP_004174398.1| histidyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319995027|dbj|BAJ63798.1| histidyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 426

 Score =  242 bits (618), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 130/471 (27%), Positives = 214/471 (45%), Gaps = 49/471 (10%)

Query: 7   LRAELP--RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
           ++A +P  +G  D   + + +RN +   IR + E +G+   E P LE  D       +E 
Sbjct: 1   MKAIVPSVKGTRDFYPEIMAVRNWLYARIREVSEKFGYQEYEGPFLERVDLYAAKSGEE- 59

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             N+  F  QD  G +I+LR +LT  LAR VA+  + +V+P R +  GP +R E+   GR
Sbjct: 60  LVNEQSFVFQDRGGDYIALRPELTPTLARMVAQRQNELVYPLRWWSFGPFWRYERPQKGR 119

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+F Q ++D +GS A  ADAE+  +  +  ++VG+      + +NNR+++D  LE +G+
Sbjct: 120 TREFFQWNIDIIGSQAIEADAELLAVAVEFFKSVGLTSQQVKLLVNNRRLMDVQLENLGI 179

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
               K      V R ID+ +K  L   +             +     LT EQ+  + S L
Sbjct: 180 REGQK----RDVFRLIDRKEKLPLPEWR------------QYAFDFGLTQEQLSGLESLL 223

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                              +  +  +EL  + EL+   G     ++ +  I+RGL+YYTG
Sbjct: 224 V----------------NESLWETSDELKRVFELLEGMGIRE-YVEFAPQIIRGLDYYTG 266

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+EA          +      S+ GGG YD LV+   G+ +P  GF++G   + + L+ 
Sbjct: 267 TVFEA----------KDLDGGRSILGGGHYDNLVANVGGEPLPGVGFAMGDVMITLVLEK 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        VL+T  D   + L +       LR  G++   +  ++K    QLK+A
Sbjct: 317 YGKLPALETAPAQVLVTVFDL--ERLPQSFALAARLREQGLKVVWYPEAAK-LQKQLKFA 373

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           DR     A+I G  E S G + +KDL +  +    ++N        +AQ  
Sbjct: 374 DRAGIRFAVIYGPDEISAGQVALKDLHQRNQELVSVENVGERVRQILAQSE 424


>gi|302795757|ref|XP_002979641.1| hypothetical protein SELMODRAFT_419303 [Selaginella moellendorffii]
 gi|300152401|gb|EFJ19043.1| hypothetical protein SELMODRAFT_419303 [Selaginella moellendorffii]
          Length = 1665

 Score =  242 bits (618), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 117/476 (24%), Positives = 210/476 (44%), Gaps = 40/476 (8%)

Query: 7    LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            +    PRG  D     + +RN +    + +   +GF+ ++ P++E      +   +E   
Sbjct: 1086 IDLNPPRGTRDFAPPLMLLRNWLFSHFKEVSRLFGFEEVDFPVVESEALYVRKAGEE--I 1143

Query: 67   NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
             + +++ +D  G+ + LR ++T  +AR + +   ++VFP R + IG  +R E+   GR R
Sbjct: 1144 TQQLYNFEDKSGRRLCLRPEITPSIARLIIQKGKSLVFPLRWFTIGQCWRYERMTKGRRR 1203

Query: 127  QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
            +  Q ++D  G     A+AE+   +      +G   ND  I ++NRK+L  +L++  +  
Sbjct: 1204 EHYQWNMDIFGVPGVEAEAELLAAIVTLFTNMGFTANDVRIRVSNRKVLQAVLDRYSVPQ 1263

Query: 187  DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            D    +   V   +DK++K   + V   L                L+S  I+ +   + +
Sbjct: 1264 D----KFNSVCVVVDKINKISKEEVDQQL------------MDLGLSSTAINGIRHAILL 1307

Query: 247  DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
               K++ ++ EL+  +    + F E+  +  L +  GY+   + +   IVRGL YYTG V
Sbjct: 1308 ---KNLDDIQELIGSS---SEAFLEMKKLFALSKAYGYDE-WLVVDLGIVRGLSYYTGIV 1360

Query: 307  YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            +EA               F ++ GGGRYD L+S F G ++PA GF  G + ++  L    
Sbjct: 1361 FEAF---------DTQGKFRAICGGGRYDKLISNFGGPSIPACGFGFGDAVIVDLLNECN 1411

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             S     E+  V       D +           LR+AG   +M L  +K       YA R
Sbjct: 1412 LSPVLGHEVDDV---VFVLDEELRCHACNIVSRLRSAGRTVDMIL-ENKKLKWVFNYASR 1467

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES--WREARVAQITIPISE 480
             +    I+ G  E   G +++KDL   +E   ++        +E +  Q  +P  E
Sbjct: 1468 IDAKRMILLGIREWEEGNVRVKDLVTREETDVKVAELVPRVPKEVQRGQGKLPDKE 1523


>gi|75908477|ref|YP_322773.1| histidyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|123731501|sp|Q3MAV8|SYH_ANAVT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|75702202|gb|ABA21878.1| histidyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 462

 Score =  242 bits (618), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 140/490 (28%), Positives = 215/490 (43%), Gaps = 50/490 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+    P GF +    E R+   +LD+IR +YE+YGF PIETP +E  + L    
Sbjct: 1   MAKNDKINFSTPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKG 60

Query: 61  PDEDRPNKGVFSL-----------QDDDGQW----ISLRYDLTAPLARYVAENFDTIVFP 105
              D     ++ +           +D  G+      +L++D T PLA Y+A + + + FP
Sbjct: 61  NQGDNI---IYGIDPILPPNRQAEKDKSGETGSEARALKFDQTVPLAAYIARHLNELTFP 117

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
              Y++  VFR E+   GRFRQF QCD+D VG    +   +  M    T     +   D+
Sbjct: 118 FARYQMDVVFRGERAKDGRFRQFRQCDIDVVGREKLSLLYDAQMPAIITEIFEAVHIGDF 177

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I INNRK+L G  + + +       +    +  ID L+K G   VKL L +        
Sbjct: 178 LIRINNRKVLTGFFQSLDISE----TQIKSCISIIDNLEKIGEAKVKLELEKE------- 226

Query: 226 FTKGANLTSEQIDIMVSFLSIDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVR 280
                 +  EQ   ++ F+ ID         +  L + +  +     G +EL  +   VR
Sbjct: 227 -----GINPEQTQKIIDFIKIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVR 281

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
             G    R  I   I RGL YYTG VYE  L              GS+  GGRY+ LV  
Sbjct: 282 NLGVPDKRFCIDLAIARGLNYYTGTVYETTLIG--------HEALGSICSGGRYEELVGT 333

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           F G+ +P  G SIG++RLI  L  L++   N     P  +  ++   + +  Y   +Q L
Sbjct: 334 FIGEKMPGVGISIGLTRLISRL--LKAGILNTLPPTPAQVVVVNMQDNLMPTYLKVSQQL 391

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R AG+         +  G Q + AD++     +I G  E +     +KDL  G+++   +
Sbjct: 392 RQAGLNVITNF-EKRQLGKQFQAADKQGIQFCVIIGADEAAAQKSSLKDLKSGEQVEVAL 450

Query: 461 KNNESWREAR 470
            +     + R
Sbjct: 451 ADLPEEVKRR 460


>gi|225682515|gb|EEH20799.1| histidyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 533

 Score =  242 bits (618), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 125/536 (23%), Positives = 221/536 (41%), Gaps = 77/536 (14%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           MGK+      + P+G  D    +  +R+RI ++I  +++ +G   ++TP+ E  + L   
Sbjct: 1   MGKEKVSFNLKTPKGTKDWFGADGLLRDRIFNAITEVFKRHGATSLDTPVFELREILAGK 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N +  +   + Y I  V+R ++
Sbjct: 61  YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPN--IRSIKRYHIAKVYRRDQ 115

Query: 120 H----GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
                G  R       D+          DAE+  +  +  E +G  +  Y I +N+RKIL
Sbjct: 116 PAMSKGRMREFYQCDIDIAGANYDPMVPDAEVLRIATEVFEGLG-WKGSYTIKVNHRKIL 174

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           DG+ E  G+  +    +   +  A+DKLDK     V+  + E              L   
Sbjct: 175 DGLFEVCGVPKE----KIRTISSAVDKLDKLPWADVRKEMVEE-----------KGLDGA 219

Query: 236 QIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             D + +++     + + E     E +    + + G  E+ ++ + +       ++I   
Sbjct: 220 VADKIETYVVRKGGRELLETLQTDEALVANPSAKAGLEEMRLLMDYLEAFDIL-DKISFD 278

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPV----------------------------- 323
            ++ RGL+YYTG +YE I       E                                  
Sbjct: 279 MSLARGLDYYTGVIYEVITEGSAPAEDPSTGEEAQKSQRESKSKSKNNDDDDDRSNDPSI 338

Query: 324 VFGSVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLIT 381
             GSV  GGRYD LV  F  +  +P  G S G+ R+    K+ +E    ++ ++  V + 
Sbjct: 339 GVGSVAAGGRYDELVGMFSNRAQIPCVGISFGVDRIFSITKARMERENTHVNKLSEVDVY 398

Query: 382 TMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
            M          L +     + L  AGI+AE           Q + A+    P A+I G 
Sbjct: 399 VMAFGGKGFTGLLKERMDVARRLWDAGIKAEFSYKRKPKPQQQFEAAEANAVPFAVIIGE 458

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            E + G +++K++  G E     K+           + + +S L   VK +L+  +
Sbjct: 459 DELANGQVRVKEM--GLEKGHPEKD----------GVLVDLSTLAEEVKALLERKR 502


>gi|85859321|ref|YP_461523.1| histidyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722412|gb|ABC77355.1| histidyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 426

 Score =  242 bits (618), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 103/472 (21%), Positives = 181/472 (38%), Gaps = 53/472 (11%)

Query: 6   KL-RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-E 63
           K+      +GF D   +E      + D+ R I+  +GF  I  P+LE +D   + + +  
Sbjct: 5   KMEVITAVKGFKDILPEETGKWRFVEDAAREIFSRFGFKEIRLPVLEKTDLFKRGIGEST 64

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGP 122
           D   K +++  D   ++++LR + T+ + R   E+      P  R + IGP+FR E+   
Sbjct: 65  DIVEKEMYTFLDRGDEYLTLRPEATSSVIRAYLEHALYNAEPVSRLFTIGPMFRRERPQR 124

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GRFRQF Q DV+ +G     ADAE+ +M+   L  VG+K     +             K+
Sbjct: 125 GRFRQFHQIDVELLGLDDPRADAEVILMLMHFLSTVGLKNVSLELNSLGCSSCRPAFRKV 184

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            L       + L      D   + G   ++  + + +     +    A         +  
Sbjct: 185 ILEFLSGKEDGL----CDDCKRRLGSNPLR--VFDCKAKECQEIIADA-------PRLSD 231

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           F+  D       +   +       K    +                       VRGL+YY
Sbjct: 232 FICSDCHTHFETVASTLTELDIPFKINARM-----------------------VRGLDYY 268

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E           +      +V GGGRYD LV    G ++P  GF++G  RLI  L
Sbjct: 269 TKTTFEVTT--------EHLGSQNAVVGGGRYDRLVEELGGPDIPGIGFAVGFERLITLL 320

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++  +      +     +        +     +    LR  G+  E    S+++  +Q+K
Sbjct: 321 QAENTRFLPQPD-----LFIASLGESAQRLAFLLCNQLRIKGLHVEQDF-SARSLKSQMK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R NC   +I G  E      + +D+  G + +  + N E      + + 
Sbjct: 375 RANRLNCAYTLILGDRELEEKKAEFRDMKTGAQQTLFLDNLEEQILKLIKER 426


>gi|329769592|ref|ZP_08260997.1| histidyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838544|gb|EGF88151.1| histidyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 426

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 105/469 (22%), Positives = 195/469 (41%), Gaps = 53/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D   +E +    I + +R I +++ ++ I TP+ E ++   + + D  D 
Sbjct: 1   MVITMPRGTQDILPEESKKWQYIEEKLRKISDSFCYEEIRTPMFESTELFSRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++  D   + I+LR + TA   R   EN      + P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFMDKGNRSITLRPEGTAGTVRSYIENKLFAKTIQPQKLYYVGPMFRYERKQKG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF+Q  V+ +G  +   DAE+  +  +  ++ GI+     I    N +      E +
Sbjct: 121 RYRQFVQYGVEVIGEESPKIDAEVISLAYNIYKSFGIENIKVSINSLGNPEERQAYNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + ++NE        D  ++     +++L  + + D   +  K A         ++ 
Sbjct: 181 VKHFEPRINEF-----CEDCNNRLYKNPMRIL--DCKVDAEHELIKNA-------PKLLE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + ++   E+   +       +  + L                       VRGL+YY
Sbjct: 227 YLGEESKQYFAEVLRHLDALGVKYEVDHNL-----------------------VRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS-RFKGQNVPATGFSIGISRLIVA 361
           T   +E ++  P        V   ++ GGGRY+GL+      ++    GF++ I RL++A
Sbjct: 264 THTAFEIMIDNPE-------VELKTLCGGGRYNGLIKLLDGPEDKKGIGFALSIERLLLA 316

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+S       +     +    +     +       T  LR AG + +      K    Q+
Sbjct: 317 LESENI---ELPIDDTIDAFVVAMGEKAGDAGVKLTNDLRLAGYKVQSDYF-DKKMKAQM 372

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           K ADR N   +II G  E   G   +KD+    + + E  N   + E +
Sbjct: 373 KLADRYNAKFSIIIGDSELENGQYVVKDMKTYDQENVEFDNIVKYLEEK 421


>gi|160893490|ref|ZP_02074275.1| hypothetical protein CLOL250_01041 [Clostridium sp. L2-50]
 gi|156864885|gb|EDO58316.1| hypothetical protein CLOL250_01041 [Clostridium sp. L2-50]
          Length = 416

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 102/467 (21%), Positives = 181/467 (38%), Gaps = 54/467 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + PRG +D    ++R R ++    RN+ E +    + TP+ E++    + + +  D 
Sbjct: 1   MITQAPRGTSDWFGDKMRTRTQVEAMARNLCEKFNIKEVITPVFEHTVLFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G+ I+L+ + TA   R   EN       P + + I P FR EK   GR
Sbjct: 61  VQKEMYTFVDKGGRSITLKPEGTAGAIRAYVENKLYAEPQPVKMFYITPAFRYEKPESGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQ  Q  V+ VGS    A+ E+  +++  +  +G+     HI          +     +
Sbjct: 121 LRQHHQFGVEFVGSPNPMAEVEVMTLVSTLIRQIGLSDAKLHINSIGCPKCKKVYNDALI 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                  E L         ++     ++++  +           G     +     + +L
Sbjct: 181 SYLKGHEEGLCNT----CKERMVKNPLRVIDCKE---------PGCKAIVKDAPRTIDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + +    EL  L+           EL +  E             + + IVRGL+YYT 
Sbjct: 228 CEECDAHFKELQRLLT----------ELEIPFE-------------VDTGIVRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-VPATGFSIGISRLIVALK 363
            V+E +                 + GGGRYD LV    G+   P+ GF +GI R++  L+
Sbjct: 265 TVFEFVNKEGFT-----------LCGGGRYDNLVYEIDGKETQPSVGFGMGIERILYFLE 313

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
               +    K    + +        + +K       LR AG   E     +++   Q+KY
Sbjct: 314 KENINLAPEKP---IDLYVGIMGDSAKAKAYKLVYDLRLAGYIVETDY-MNRSVKAQMKY 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           A++ N    II G  E      +IK++  G++    +    S  E R
Sbjct: 370 ANKLNARYTIIIGDNELETNTGRIKNMETGEQTEIALDQLASVLEER 416


>gi|260578817|ref|ZP_05846724.1| histidine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603115|gb|EEW16385.1| histidine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 443

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 98/479 (20%), Positives = 183/479 (38%), Gaps = 69/479 (14%)

Query: 5   TKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD- 62
            K +A   P+G  D           + D+  +     G++ +E P+ E +    + + + 
Sbjct: 17  EKFKALSAPKGVPDYVPPTSAEFKAVKDAFTSAAHAAGYEHVELPIFEETSLFARGVGES 76

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
            D  +K +++  D  G+ ++LR + TA + R V E+       P +    GP FR E+  
Sbjct: 77  TDVVSKEMYTFADRGGRSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLVYNGPFFRYERPQ 136

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRK 173
            GR+RQ  Q  V+ +G      DAE+  +      ++G            D+      R+
Sbjct: 137 AGRYRQLQQVGVEAIGVDDPALDAEVIALAHRCFSSIGLNGFRLELTSLGDWDDRPAYRQ 196

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L   L  + L  + +   +L  LR +D       + +                      
Sbjct: 197 KLQDFLATLPLDEETQRRAQLNPLRVLDDKRPEMQEMLAE-------------------- 236

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                +M+  LS    +    +  L+     G                         I+ 
Sbjct: 237 ---APLMLDHLSDSSREHFETVTGLLDDLGVG-----------------------YTINP 270

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   GF +
Sbjct: 271 RMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLSGIGFGL 322

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+ R ++AL++ E   +  +    V +  +   +++  +       LR  G+ A+M  G 
Sbjct: 323 GVDRALLALEAEEKRASTGRR---VDVYGVALGAEAKRRMVGIVDDLRERGVSADMSYG- 378

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +     +K ADR     A++ G  E + G + +KDL   ++   ++         + A
Sbjct: 379 DRGLKGAMKGADRAGALYALVLGDKELAEGTVTVKDLGAHEQHEVDLAAVVELLAEKTA 437


>gi|172058096|ref|YP_001814556.1| histidyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990617|gb|ACB61539.1| histidyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 426

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 183/468 (39%), Gaps = 48/468 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +LPRG  D     +     I + +R I + Y +  I TP+ E ++   + + +  D   K
Sbjct: 2   KLPRGTFDVLPGTVERWQYIENQLREISKRYNYKEIRTPIFEETELFKRGVGETTDIVQK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGRFR 126
            +F L+    +  +LR + TA + R    N        P + + IGP+FR E+   GRFR
Sbjct: 62  EMFMLEKRGKEQFTLRPEGTAAVVRSFVTNKLYGAANQPVKLFYIGPMFRYERPQAGRFR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           Q  Q  V+ +GS     DAE+  +      + G+K+    I             +  ++ 
Sbjct: 122 QLHQYGVEALGSEEPAIDAEVISLAMSIYRSFGLKKLKLVINSLGDSESRAAHREALVNH 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                + +      D  ++  +  +++L  +   ++          +      ++ FL+ 
Sbjct: 182 ----FKPVAHELCQDCQNRLEVNPLRVLDCKVDRNHP---------SMATAPSILDFLNP 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             ++   ++   +                               I  T+VRGL+YY    
Sbjct: 229 ASKEYFDQVLLHLDAL-----------------------GIEYVIDPTLVRGLDYYNHTS 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E       M+E +      ++ GGGRY+GLV +  G   P  GF IGI RL++AL++  
Sbjct: 266 FEI------MSEAEGFGAITTLCGGGRYNGLVEQIGGPATPGIGFGIGIERLLMALENEG 319

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                   +   +      + +         Q++R  G+ A+      + F  Q K ADR
Sbjct: 320 VLPEIDDAID--VFIVAQGNDEVEKTATRLLQLMRLEGLAADRDY-LGRKFKGQFKAADR 376

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                 +I G  E  RG   +KD++ G+++   +        A++ + 
Sbjct: 377 LKARFTVILGDEEVERGAAALKDMSTGEQIDVPLSAVADTIVAKLKEE 424


>gi|301128277|ref|XP_002909994.1| histidyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262108991|gb|EEY67043.1| histidyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 776

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 117/489 (23%), Positives = 209/489 (42%), Gaps = 56/489 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + ++ +G  D    ++ +R +I + IR +++ +    IETP+ E  ++L     ++   +
Sbjct: 326 KPKIAKGSQDFLPHQMALREKIFNKIRMVFKRHAGVEIETPVFELKETLTGKYGED---S 382

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRF 125
           K ++ L D  G+ ++LRYDLT P AR++A          + Y I  V+R +      GRF
Sbjct: 383 KLIYDLADQGGELLALRYDLTVPFARFMA---LHSPGNIKRYHIARVYRRDNPQMARGRF 439

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F QCD D  G+ A        + +   +     +     + +++R +LD IL   G+ 
Sbjct: 440 REFYQCDFDIAGTYAPMLPDAEVLSIGIEVLQQFPELGPVKVKLSHRLLLDAILAICGVP 499

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D    +      AIDKLDK     V+  + +             ++  E  D +  F+ 
Sbjct: 500 VD----KFRTTCSAIDKLDKEPWSDVRREMVDE-----------KDIPEEVADRIEPFVC 544

Query: 246 -IDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +   + +H       +        +  ++L ++   +   G   + I    ++ RGL+Y
Sbjct: 545 KVGSPRELHAQLVKENMFGDNANARRAMDDLALLFNYLEAMGVL-DFISFDLSLARGLDY 603

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLI 359
           YTG +YE +L  P  +        GS+  GGRYD LV  F   +   P  G S+GI R+ 
Sbjct: 604 YTGLIYEFVLTSPEHH-------VGSIAAGGRYDNLVGMFSATDQQIPCVGVSLGIERIF 656

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L +  +   +     P  +      +D         + L  A I AE+    +  F  
Sbjct: 657 GILHAH-AEKQSANAAPPSQVLVASTSNDLTMPRLELCKQLWLANISAEVMQTENPKFIK 715

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           QL YA  R  P  ++ G  E ++G++++KD+A   E+                   +P S
Sbjct: 716 QLHYALERGTPYMVVIGVDELAKGVVKMKDMASKDEV------------------NVPRS 757

Query: 480 ELVSTVKKI 488
           E+VS + + 
Sbjct: 758 EVVSELLRR 766


>gi|227542205|ref|ZP_03972254.1| histidyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227182034|gb|EEI63006.1| histidyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 420

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 97/472 (20%), Positives = 184/472 (38%), Gaps = 68/472 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              P+G  D      R    + ++  +  +  GF+ IE P+ E +    + + +  D   
Sbjct: 6   FSAPKGVPDYVPPVSREFLAVRETFTHEAQRAGFEHIELPIFEDTHLFARGVGESTDVVT 65

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D  G+ ++LR + TA + R V E+       P +    GP FR E+   GR+R
Sbjct: 66  KEMYTFEDRGGRSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLVYSGPFFRYERPQAGRYR 125

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  V+ +G      DAE+  +     ++VG            D       R+ L   
Sbjct: 126 QLQQVGVEAIGVDDPALDAEIIALADRCYKSVGLTGYRLDLSSLGDAECRPAYREKLQAF 185

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L K+ L  + +    +  LR +D         V+ +L +                     
Sbjct: 186 LRKLPLDEETQRRAEINPLRVLDDKRP----EVQEMLVD-------------------AP 222

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +++  LS    +    +  L+                               I+  +VRG
Sbjct: 223 LLLDHLSNSSREHFEVVKGLLDDF-----------------------GVSYTINPKLVRG 259

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E +         +       +GGGGRYDGL+++  GQ +   GF +G+ R 
Sbjct: 260 LDYYTKTCFEFV--------HEGLGAQSGIGGGGRYDGLMAQLGGQELSGIGFGLGVDRT 311

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++   S  + +    V +  +   S++          LR AG+  +M  G  +   
Sbjct: 312 LLALEAEGVSAGSPRR---VDVYGVPLGSEAKRVLAGVVNNLRAAGVSTDMSYG-DRGLK 367

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             +K A R      ++ G  E + G + ++D+   ++ +  +   +++ E R
Sbjct: 368 GAMKGASRSGARYCLVLGEQELADGNVAVRDMNNHEQETVSLSAVQAFLEER 419


>gi|189501712|ref|YP_001957429.1| histidyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497153|gb|ACE05700.1| hypothetical protein Aasi_0257 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 458

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 145/472 (30%), Positives = 219/472 (46%), Gaps = 49/472 (10%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEY-SDSLGKFLPD 62
           + +   +L +G  D    ++  R+ I D+IR +Y+ YGF P+ETP LEY S   G++  +
Sbjct: 2   QERQTPQLVKGTRDFNALQVAQRSYIFDTIRQVYQKYGFSPLETPALEYVSTLFGQYGQE 61

Query: 63  ED-----RPNKGVF-------SLQDDDGQWI-------SLRYDLTAPLARYVAENFDTIV 103
            +       N G F        L D + + +        LRYDLT PL RYVA ++  + 
Sbjct: 62  GEQLVFRVLNSGNFLGDTPQALLIDQNYKEVLPKISEKGLRYDLTVPLMRYVATHYHELT 121

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
            P R Y+I PV+R ++   GR+R+F QCD D VG+ +   +AE+  M  + L+ +G   N
Sbjct: 122 LPFRRYQIQPVWRADRPQKGRYREFYQCDADVVGTPSLIVEAEILAMAYEVLQRLG--IN 179

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
           D+ I +N+R IL+GI  +IG     +L         +DKLDK G   V   L       +
Sbjct: 180 DFIIHLNHRSILNGIASQIG-----ELERVNEFCTIVDKLDKVGKDKVITELLSKGFSEA 234

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
           G          E+ D +   L  D    +  L   +     G KG  EL  I + +   G
Sbjct: 235 G---------LEKFDFIFD-LQGDNNAKLDILSNHLAHDKVGSKGLQELKEILQYLEALG 284

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
                I    ++ RGL YYTG V+E  L           +  GS+ GGGRYD L   F  
Sbjct: 285 MTQVPISFEPSLARGLAYYTGAVFEVKLP---------TINIGSIAGGGRYDNLAEHFGV 335

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            ++   GFS G+ RL VA++ L            V++T +  D +S+         LR  
Sbjct: 336 SSLTGVGFSFGVDRLYVAMEQLNLFPQQAYFNTKVMVTNL--DEESVKVALDIITRLRNH 393

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
            I AE++    K    QL YA++++ P  +I G  ER      +KD++ G +
Sbjct: 394 DIPAELYPEKVK-LKKQLMYANKKDIPFVLIIGEEERQASKFTLKDMSTGDQ 444


>gi|307326771|ref|ZP_07605963.1| histidyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306887534|gb|EFN18528.1| histidyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 420

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 97/476 (20%), Positives = 176/476 (36%), Gaps = 69/476 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + PRG  D           + ++I    +  G+  IETP  E  +   + + +  D  
Sbjct: 3   TFKAPRGTYDLIPPASAAYLAVREAIAAPLKRSGYGYIETPGFENVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++L    G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYTLTTKGGDELALRPEGTASVLRAALEANLHKAGSLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++  D   ++G            D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILAHDAYRSLGLRDFRILLNSLGDATCRPVYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  D +    +  LR +D       + V+  L                     
Sbjct: 183 DFLRGLDLDEDTRARVEINPLRVLDDK----REAVREQLT-------------------G 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L  + +    E+ EL+       +   +L                       V
Sbjct: 220 APLLRDYLCEECKAYHAEVRELITARGVAFEDDAKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     N       V +  +    ++          LRTAG+  +   G  K 
Sbjct: 309 RTVLALEAEGIELNLP---DAVSVFAVPLGEEARKVLFGVVGELRTAGVATDFAYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +K A+R     AI+ G  + +  ++Q+KD+  G++    +       ++R+A
Sbjct: 365 LKAAMKAANRSGARYAIVAGERDLAEDVVQLKDMESGEQAPVPLAEVVEAIQSRLA 420


>gi|90417492|ref|ZP_01225415.1| histidyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90330733|gb|EAS46012.1| histidyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 424

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 98/490 (20%), Positives = 196/490 (40%), Gaps = 77/490 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ +  RG  D    +      +   I ++   Y +  I  P+LE ++   + + +  D 
Sbjct: 1   MKLQSIRGMNDLLPDQSPTWQYLESVIGDVLARYSYREIRFPILEQTELFKRSIGEVTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +++ +D +G  +SLR + TA   R   +N        R +  GP+FR+E+   GR 
Sbjct: 61  VEKEMYTFEDRNGDSLSLRPEGTASCVRACNQNGLLHNQIQRLWYTGPMFRHERPQKGRL 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILE 180
           RQF Q  V+  G +    DAE+ ++ A   +A+ I +      +      +RK+    L 
Sbjct: 121 RQFHQVGVEAFGLNGPDIDAELLLITARLWQALNIDQAVTLQVNSLGTSADRKVYRAALV 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D+L+E        D   +     +++L  +       +    A L      ++
Sbjct: 181 EYLSARHDQLDE--------DSQRRLHSNPMRILDSK-------NADTQALLND--APVL 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             ++  + +   ++L  ++                            R +I+  +VRGL+
Sbjct: 224 QDYIDSESKAHFNQLRAMLDAA-----------------------DIRYEINPRLVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+  V+E +               G+V  GGRYDGLV +  G+  P  GF++G+ RL++
Sbjct: 261 YYSKTVFEWVTSS--------LGAQGTVCAGGRYDGLVEQLGGKPCPGVGFAMGMERLVL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFG 418
            L  L    +++ +   + +  +    D   +  +  + LR+     R +   G   +F 
Sbjct: 313 LLDELGVVPDSVAQTVDLYLVAVG---DVGQQALVLGENLRSHCPTQRLQTNCGGG-SFK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           +Q+K AD+    +A+I G  E +   + +K                 +      Q T+  
Sbjct: 369 SQMKKADKSGASIALILGEDEAANNKVGVK-----------------FLRQDRPQETVDQ 411

Query: 479 SELVSTVKKI 488
            +L + +  +
Sbjct: 412 DQLANLINTL 421


>gi|39996759|ref|NP_952710.1| histidyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|46396580|sp|P60915|SYH_GEOSL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|39983647|gb|AAR35037.1| histidyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505771|gb|ADI84494.1| histidyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 413

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 87/455 (19%), Positives = 166/455 (36%), Gaps = 56/455 (12%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    E+     I  + R ++  YGF  I  P+LE ++   + + D  D   K ++
Sbjct: 6   KGFNDILPGEVERWQHIEATARRVFSLYGFSEIRIPILEKTELFRRSIGDTTDIVEKEMY 65

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFRQFIQ 130
           S  D     +++R + TA + R   E+      P  + Y +GP+FR E+   GR+RQF Q
Sbjct: 66  SFVDKGENAVTMRPEGTASVMRSYIEHKLYAQDPVAKLYYMGPMFRYERPQKGRYRQFHQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIGLHGDDK 189
              +  G +    DA++  M+      +G+         +   +      + +     ++
Sbjct: 126 IGAEVTGVTDPKVDAQVLTMLCHYFAELGLTEPTLQINSLGCPECRPAYRQALIDFLRER 185

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           L          D   ++    ++ L  +                +     M+  L    +
Sbjct: 186 L-----DSLCEDCKRRYQTNPLRALDCKS---------AHCKEATASAPAMLDSLCAGCD 231

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                    ++         N +                       VRGL+YYT   +E 
Sbjct: 232 DHFTATRRHLERAGTTYSINNRM-----------------------VRGLDYYTRTTFEL 268

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           +                +V  GGRYDGL+S   G  +P  GF++G+ R+ + L       
Sbjct: 269 VT--------GLLGAQSAVAAGGRYDGLISDLGGPAIPGIGFAMGVERIALLL------- 313

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            +   +G   +       ++  +       L+  G+  EM     K+  +Q++ +D+ N 
Sbjct: 314 GDQHFVGRPDLFIAALGEEAQDEAFRLMCGLQRNGVAVEMDY-EGKSLKSQMRRSDKFNA 372

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              +I G  E + G   +K +  G ++   +   E
Sbjct: 373 RFTLIIGGDELAIGAAVLKAMDTGVQVEVPLTPEE 407


>gi|296107126|ref|YP_003618826.1| histidyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295649027|gb|ADG24874.1| histidyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 426

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 89/470 (18%), Positives = 179/470 (38%), Gaps = 59/470 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D       +   I  +  N    YG+  I  P++E +    + + +  D  
Sbjct: 5   KIQAIRGMNDVLPDSTSVWRFIEQTFINCLVRYGYKEIRFPIVENTQLFKRTIGEITDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  I+LR + TA   R   E+        + + +GP+FR+E+   GR+R
Sbjct: 65  EKEMYTFNDLNGDSITLRPEGTAGCVRACIEHGLLHNQQQKLWYLGPMFRHERPQKGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q  V+ +G +    + E+  +       +G  ++     +    IN R+    IL +
Sbjct: 125 QFNQFGVEALGITGTAIELELISICRRLWADLGFSQSVQLQVNSLGEINERQKYRSILVE 184

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                          +   D   +     +++L  +                 +    ++
Sbjct: 185 YLRDH--------FHILDEDSKRRLDKNPLRVLDSKN---------PDLQQLIQNAPKLI 227

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L  D ++        ++                              I+  +VRGL+Y
Sbjct: 228 DVLGDDSKEHFQSFCNGLETL-----------------------GIPYSINPVLVRGLDY 264

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +          +     ++  GGRYD LV    G   PA GF++G+ R+ + 
Sbjct: 265 YGQTVFEWVT--------DQLGSQATICAGGRYDMLVEFLGGAPTPAVGFALGLERIFLL 316

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
           +++L     +  +     I  +  + +++ K  +  + +R A    ++    +   F +Q
Sbjct: 317 METLNLLNESNNKQS---IFIIATNEEAILKALVMAESIRNAHPSLDVITNTAGGGFKSQ 373

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREA 469
            K AD+    LA+I G  E +R  + IKDL    +++S  +     + + 
Sbjct: 374 FKKADKSGARLALILGEDEIAREYVSIKDLRTEIEQISIPMTKINEFLQD 423


>gi|330504678|ref|YP_004381547.1| histidyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328918964|gb|AEB59795.1| histidyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 428

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 96/482 (19%), Positives = 180/482 (37%), Gaps = 71/482 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++      +  ++ ++ + YG+  I  P++EY++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPAWRYLESTLVSLLDGYGYKEIRLPIVEYTELFARGI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D  +K +++  D + + ++LR + TA   R V E+         + +  GP+FR E
Sbjct: 57  GEGTDVVDKEMYTFLDRNEESLTLRPEGTAGCVRAVLEHGLAGGGQVQKLWYAGPMFRYE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           K   GR+RQF Q  V+         DAE+ ++     + +G                   
Sbjct: 117 KPQKGRYRQFHQVGVEAFNLPGPDVDAELIVLTWRLWKQLGLADAVTLQLNSLGSSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L++     D+            D   +     +++L  +   + +     G
Sbjct: 177 AYRDALVAYLQERFDQLDE------------DSQRRLTTNPLRILDSK--NEATQALLVG 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A         +  +L  +       +   +                            R 
Sbjct: 223 A-------PTLGDYLDEESRLHFEGVKARLDAA-----------------------GIRY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I+  +VRGL+YY   V+E +          K    G+V  GGRYDGLV++  G+  P  
Sbjct: 253 QINHKLVRGLDYYNRTVFEWVT--------DKLGAQGTVCAGGRYDGLVAQLGGKATPGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++G+ RL++ L++LE     +     V +      ++         + LR    R  +
Sbjct: 305 GFAMGVERLVLLLETLELLPAELNRAADVYVCAFGEAAEL--AALTLVERLRDELPRLRL 362

Query: 410 FL-GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWR 467
            L     +F +Q K AD+     A+I G  E +  ++  K L    ++ S          
Sbjct: 363 LLNTGGGSFKSQFKKADKSGARYALILGDDELAARVVGCKPLRDDSEQQSVAWDALAEHL 422

Query: 468 EA 469
            A
Sbjct: 423 AA 424


>gi|315658099|ref|ZP_07910971.1| histidine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496428|gb|EFU84751.1| histidine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 419

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 97/464 (20%), Positives = 186/464 (40%), Gaps = 50/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   +E      I + +  + + Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IKIPRGTQDILPEETAKWRYIENKLAQLMKLYNYQEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   EN        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGNRSITLRPEGTAAVVRSYIENKMQGLPNQPVKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K     I  I + +      E +  
Sbjct: 122 RQFTQFGVEAIGAEDPSIDAEVLAMVMQIYQSFGLKHLKLVINSIGDAESRKEYNEALVK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +  +++        D   +     +++L  +   D     T            +  +L
Sbjct: 182 HFEPVIDDF-----CSDCQSRLHTNPMRILDCKVDRDKKAIKT---------APKITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + +     + + +                          +      S +VRGL+YYT 
Sbjct: 228 NDESKAYYEAVKQYLDDL-----------------------NIPYVEDSNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G N    GF++ I RL++AL+ 
Sbjct: 265 TAFELMMDNPNYD-----GAITTLCGGGRYNGLLQLLDGPNQTGIGFALSIERLLLALEE 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                   + +    +  +     +           R  GI A+     ++    Q+K A
Sbjct: 320 ENIDIVENETLD---LFIVTMGEAANHFAVKLLNDCRKNGIIADKDY-LNRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           DR N    I+ G  E    ++++K +  G   + + +N  S+ +
Sbjct: 376 DRLNATYTIVIGDQELDNQIVEVKHMESGNSETVKFENLLSYFK 419


>gi|238854670|ref|ZP_04645000.1| histidine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664387|ref|ZP_05865239.1| histidyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932939|ref|ZP_06338336.1| histidine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472207|ref|ZP_07812699.1| histidine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832460|gb|EEQ24767.1| histidine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529590|gb|EEQ68591.1| histidine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561452|gb|EEX27424.1| histidyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281302974|gb|EFA95179.1| histidine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 426

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 108/471 (22%), Positives = 176/471 (37%), Gaps = 57/471 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G  D          ++    R+ ++   +  I TP  E  +   +   +  D 
Sbjct: 1   MKVQKPKGTVDILPDVSGNWEKVEQIARDFFKQANYREIRTPSFESYEVFSRSSGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   EN         P   Y I  +FR E+   
Sbjct: 61  VEKEMYDFNDKGGRHIALRPEGTAGVVRSYVENKMYGPDVVKPFNVYYIESMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q   ++ GS+   AD E  MM  D L  +G+K  + HI        RK     
Sbjct: 121 GRQREFHQIGCESFGSNNPLADIETIMMGNDLLNKLGVKNFELHINSLGNEVVRKAYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D                 
Sbjct: 181 LINYFTPVKDQLSE--------DSQRRLMKNPLRILDSKEEQDKQF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +V +L  + + +   + + +          ++L                       VRG
Sbjct: 224 RIVDYLDDESKANFKFITDALDKLGIKYVLDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    +      V      GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVADTDLWASPTTV-----LGGGRYNHLVEEFGGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+        +     +     +    +  K     + LR  G R +  +   K   
Sbjct: 316 MLVLEKQN---PELFADSGIDFFITNIGEGTALKSVELARKLRAQGQRVQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           NQ K ADR +    I  G  E + G + IK LA GK++        +  EA
Sbjct: 372 NQFKKADRVHAEFVITLGEKELAEGNVSIKRLADGKQIKLSWDEMNNISEA 422


>gi|72381901|ref|YP_291256.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|123746309|sp|Q46LS5|SYH_PROMT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|72001751|gb|AAZ57553.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 426

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 102/482 (21%), Positives = 187/482 (38%), Gaps = 64/482 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           RG  D    + +   ++       +   G   I TP++E ++   + + +  D   K ++
Sbjct: 8   RGMVDLLPAQSQGWQKVESIALEHFSRAGLQEIRTPIIEQTELFSRGIGENTDVVGKEMY 67

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           S  D  G+  +LR + TA +AR + ++      P R +  GP+FR E+   GR RQF Q 
Sbjct: 68  SFDDRGGRSCTLRPEGTASVARSIVQHGLLNKGPQRLWYRGPMFRYERPQAGRQRQFHQI 127

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            V+ VG ++  +DAE+  +  + L+ VG+      I          I ++          
Sbjct: 128 GVEFVGLASVISDAEVISIAWNFLKDVGLNELTLEINSLGSNEDRNIFKE----ELKDWL 183

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
            +   L   D   +  +  +++L  +  +               +   ++ FLS + +  
Sbjct: 184 NQRFDLLDEDSQKRINVNPLRILDSKNNSTKE---------LLSEAPSLIDFLSNESKTR 234

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
              L EL+                              +I+  +VRGL+YY+   +E   
Sbjct: 235 FDYLQELLVNL-----------------------KIPYEINYNLVRGLDYYSHTAFEIT- 270

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                          +V GGGRYDGL+S   G   P+ G++IG+ RLI+        + +
Sbjct: 271 -------SDHLGSQATVCGGGRYDGLISELGGPQAPSIGWAIGMERLIILAGDKILQSKS 323

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  +     +       T  LR++ +  E+   S  +F  Q K AD+     
Sbjct: 324 PD------VYVIHKGKKAEQLALEITCQLRSSNLIIELDY-SGSSFSKQFKRADKSRAKW 376

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           A++ G  E S+G L +K L   +            ++    +     S+L   +KK++ E
Sbjct: 377 ALVIGEDEVSKGQLLMKKLRDKQ------------KDEESREYIFSKSDLDQLIKKLIAE 424

Query: 492 NK 493
            K
Sbjct: 425 KK 426


>gi|304311809|ref|YP_003811407.1| Histidyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301797542|emb|CBL45762.1| Histidyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 425

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 118/494 (23%), Positives = 198/494 (40%), Gaps = 74/494 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           MGK    R    RG  D    +      + D++RN+   YG+  I  P++EY++   + +
Sbjct: 1   MGK----RITAIRGMNDILPSQSVAWRHLEDTVRNLLTGYGYGEIRLPIVEYTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G+ ++LR + TA   R   E         R +  GP+FR EK
Sbjct: 57  GEVTDIVEKEMYTFEDRNGESLTLRPEGTAGCVRAGEEQGLLYNQVQRLWYAGPMFRYEK 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+ ++ A    A+GI            +++   L
Sbjct: 117 PQKGRYRQFHQIGVETFGMVGPDIDAELIVLTAQLWAALGIS-----------ELVRLQL 165

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG-RTDNSGDFTKGANLTSEQID 238
             +G   +       +V       ++      + L     R  +S D    A L  +Q  
Sbjct: 166 NSLGTSAERARYRTDLVAWLEQHREQLDEDSQRRLTSNPLRILDSKDPATQAIL--DQAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +L  +       L  ++                            R +I+  +VRG
Sbjct: 224 SLADYLEDESRTHFDGLKAMLDAA-----------------------GVRYEINPRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++G+ RL
Sbjct: 261 LDYYGKTVFEWVTTA--------LGAQGTVCAGGRYDGLVEQLGGRATPAVGFAMGVERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKN 416
           ++ L++ +   +   +     I +   ++ SL+        LR A  G+R  M  G  K 
Sbjct: 313 VLLLETCDKVAHLNLQPHAYFIVSEGLEAQSLA----MAGRLRAALPGLRLTMHCGGGK- 367

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           F  Q+K AD     +A+I G  E + G L IK +                      Q TI
Sbjct: 368 FKKQVKKADESGARVALILGENEAASGELAIKYMR-----------------EDRPQETI 410

Query: 477 PISELVSTVKKILQ 490
             + +V  +  ++Q
Sbjct: 411 TEAAVVERLLALMQ 424


>gi|78183804|ref|YP_376238.1| histidyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123743570|sp|Q3B0D3|SYH_SYNS9 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|78168098|gb|ABB25195.1| histidyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 430

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 87/452 (19%), Positives = 184/452 (40%), Gaps = 53/452 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   + ++    +    R  ++  GF  I TP++E +D   + + +  D  
Sbjct: 3   QLQSLRGMVDLLPQALQRWQAVESVARTHFQRSGFGEIRTPVMEPTDLFCRGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D   +  +LR + TA + R   ++      P + +  GP+FR E+   GR R
Sbjct: 63  GKEMYTFNDRGDRSCTLRPEGTASVVRAALQHGLLSQGPQKLWYAGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLH 185
           QF Q  V+ +G+++  AD E+  +  D L ++G+   +  +    +          +   
Sbjct: 123 QFHQIGVEWLGAASARADVEVIALAWDLLASLGVGGLELELNSLGSTDDRCAYRTALVAW 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + +       L   D   +     +++L  +                            
Sbjct: 183 LEQRS-----NLLDEDSRARLNTNPLRILDSKN--------------------------- 210

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               +++ +    +  ++A  +      V+ + +   G      ++S  +VRGL+YY   
Sbjct: 211 -KATQALLDGAPTLANSLAP-ESRERFEVVQQGLASLGIP---FRLSPRLVRGLDYYCHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E            +     +V GGGRY+GL+ +  G + PA G+++G+ RL++ +++ 
Sbjct: 266 AFEIT--------SDQLGAQATVCGGGRYNGLIGQLGGPDTPAVGWALGMERLLLVVEAA 317

Query: 366 ESSTNNIKEMGPVLITT-----MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            ++  +        +       ++    +     +  + LR AG+  E+   S  +F  Q
Sbjct: 318 ANADPDGDSARLTAVVPPNAYLVNRGEQAEKAALILARSLRCAGLVIELD-NSGASFSKQ 376

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            K ADR     A++ G  E  +G ++IK L+ 
Sbjct: 377 FKRADRCGARWALVLGDEEVEKGEVRIKPLSD 408


>gi|282877174|ref|ZP_06286012.1| histidine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281300666|gb|EFA92997.1| histidine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 457

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 135/485 (27%), Positives = 220/485 (45%), Gaps = 55/485 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  + +G  D    E+  RN I  +I ++Y  YG+  IETP +E   +L GK+  + D  
Sbjct: 4   KPTIVKGTRDFSPMEMSKRNYIFKTIEDVYSLYGYQQIETPAIETLQTLMGKYGEEGDKL 63

Query: 65  ---RPNKGVFSLQDDDGQWI--------------SLRYDLTAPLARYVAENFDTIVFPCR 107
                N G F  + DD + +               LRYDLT P ARYV  + D + FP +
Sbjct: 64  LFKVLNSGDFLRKVDDKELVERNTLKLASQLCEKGLRYDLTVPFARYVVMHHDELQFPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++ +  +  G+      I
Sbjct: 124 RYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDEVFQRFGV---RVII 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL GI E IG          + +  AIDKLDK GL+ V   L            
Sbjct: 181 KINNRKILSGIAEMIGAADK-----IVDITVAIDKLDKIGLENVNQELA----------- 224

Query: 228 KGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
             A ++ + I+ +   +S+    ++ ++ +  ++K +  G KG  E+  I ++++     
Sbjct: 225 -NAGISPDAIEKLQPIISLQGTNDEKLNVIKNVLKDSQVGLKGVEEVAYILDVLK-PMQL 282

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +N I++  T+ RGL YYTG ++E          K K V  GS+ GGGRYD L   F    
Sbjct: 283 NNEIELDLTLARGLNYYTGAIFEV---------KAKDVSIGSITGGGRYDNLTGIFGKPG 333

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G  R+   L +L+             I  ++      +         R+ G+
Sbjct: 334 LSGVGISFGADRIYDVLNALDLYPKETTNST--QILFINFGEKETAYCLPLVNEARSHGV 391

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AEM+  + K    Q+ YA+ +      + G  E     + IK++  G+++   I +   
Sbjct: 392 SAEMYPDAVK-MKKQMSYANAKQIAFVAMAGENEMQENKITIKNMETGEQILVPISDFMD 450

Query: 466 WREAR 470
               +
Sbjct: 451 VFSEQ 455


>gi|159483697|ref|XP_001699897.1| hypothetical protein CHLREDRAFT_112211 [Chlamydomonas reinhardtii]
 gi|158281839|gb|EDP07593.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 443

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 113/476 (23%), Positives = 200/476 (42%), Gaps = 39/476 (8%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           +K  +  + PRG  D P +++R+RN +      +   +GF+  + P+LE  +   +   +
Sbjct: 5   RKGMIDTQPPRGTRDFPPEDMRLRNWLFGEFAAVSAAFGFEQFDAPVLESEELFVRKAGE 64

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           E      +++ +D  G+ ++LR +LT  LAR V +    +  P + + IG  +R E+   
Sbjct: 65  E--ITDQLYNFEDKGGRRVALRPELTPSLARLVLQRGKQLPLPAKWFAIGQCWRYERMTR 122

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+  Q ++D VG     A+AE+   +    E VG+   D  I ++NRK+L  +L + 
Sbjct: 123 GRRREHYQWNMDIVGVPGVEAEAELLAAIVAFFERVGLTAADVGIKVSNRKVLQAVLTQY 182

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+  +        V   +DKLDK   + V+  L     + S        L    +D + +
Sbjct: 183 GVPPES----FAKVCVIVDKLDKLPREKVEEELRVLGVEASTIDGVLGALQLRDLDQLAA 238

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L  D                   +   EL  + E +       + +    ++VRGL YY
Sbjct: 239 LLGADS------------------EAVAELRRLWE-LAAGYGFQDWLVFDPSVVRGLAYY 279

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVA 361
           TG V+EA         + +     ++ GGGRYD L++ F   ++ P  GF  G + ++  
Sbjct: 280 TGTVFEA---------RDRAGQLRAICGGGRYDKLLATFGAAEDTPMAGFGFGDAVIVEL 330

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           LK           +  V    +  D             LR  G R ++ L  +K      
Sbjct: 331 LKDRGLLPAPAHRVDDV---VVPLDGGLRPAAAGVATALRRGGRRVDLVL-EAKKMKWAF 386

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           K+A++      ++ G  E  RG + +KDLAK ++   ++        A  A   + 
Sbjct: 387 KHAEKLGASRLVLVGASEWERGAVVVKDLAKFEQKEIQVAELTGAAAAAAAAAAVS 442


>gi|317968542|ref|ZP_07969932.1| histidyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 418

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 99/462 (21%), Positives = 182/462 (39%), Gaps = 62/462 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    +  +  R+ +  R  +       I TP+LE ++   + + +  D  
Sbjct: 3   KLQSLRGMVDLLPAQTALWQRVENEAREQFRRACVQEIRTPVLEVTELFARGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D   +  +LR + TA + R   ++      P R +  GP+FR E+   GR R
Sbjct: 63  GKEMYTFLDRGDRSCTLRPEGTASVVRAAIQHGLLSQGPQRLWYAGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKI 182
           QF Q  ++ +G +   +D E   +  D L ++GI+      +      +R      L   
Sbjct: 123 QFHQIGLECLGFADARSDVEAIAVAWDLLTSLGIQGLALELNTLGSSEDRVRYREQLVAY 182

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D L+         D  D+     +++L  +    ++      A   ++ +     
Sbjct: 183 LQQHRDHLD--------PDSQDRLERNPLRILDSKNT--DTQAVLVNAPTLADAL----- 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                  E+  +    +   +           ++  +VRGL+YY
Sbjct: 228 ----------------------AEESRDRFEQVRAGLDALAIP---YTLNPRLVRGLDYY 262

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +   +E            +     +V GGGRYDGLV +  G   PA G+++G+ RL++ L
Sbjct: 263 SHTAFEITST--------QLGAQATVCGGGRYDGLVEQLGGPVTPAIGWALGMERLVMLL 314

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
              ++         P  +  +     + S   + T+ LR AG+R E    S   F  Q K
Sbjct: 315 GQQDA-------STPPDLYVVSRGQSAESAALLLTRSLRLAGMRVERDP-SGAAFAKQFK 366

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNN 463
            ADR     A + G GE  RG++++K L +  +EL   +K+ 
Sbjct: 367 RADRSGSRWAAVLGDGELERGVVRLKPLREVAEELELPLKDL 408


>gi|297590826|ref|ZP_06949464.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|297575712|gb|EFH94428.1| histidine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
          Length = 420

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 99/464 (21%), Positives = 185/464 (39%), Gaps = 50/464 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   ++ +    I + +  +   Y +  I+TP+ E +D   + + D  D   
Sbjct: 2   IKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIKTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   E+        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    ++ G+K     I    +        E +  
Sbjct: 122 RQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +  ++E        D   +     +++L  +   D     T            +  FL
Sbjct: 182 HFEPVIHEF-----CSDCQSRLHTNPMRILDCKVDRDKEAIKT---------APRITDFL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + +    ++   +                                   +VRGL+YYT 
Sbjct: 228 NEESKAYYEQVKAYLDDL-----------------------GIPYIEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P  +         ++ GGGRY+GL+    G +    GF++ I RL++A   
Sbjct: 265 TAFELMMDNPNYD-----GAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLA-LE 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E    +I+E   + I TM   +D           LR  GI+A+      +    Q+K A
Sbjct: 319 EEGIELDIEENLDLFIVTMGDQADR--YAVKLLNHLRHNGIKADKDY-LQRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           DR      I+ G  E     + +K++  G+  + E+     + +
Sbjct: 376 DRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFK 419


>gi|172040627|ref|YP_001800341.1| histidyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|229558650|sp|B1VDK9|SYH_CORU7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|171851931|emb|CAQ04907.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 427

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 98/485 (20%), Positives = 184/485 (37%), Gaps = 71/485 (14%)

Query: 1   MGKKTKLRAEL---PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M    + + +    P+G  D    +      +  +  +   N G++ IE P+ E +    
Sbjct: 1   MTNSGEKKFQPLHAPKGIPDYVPPQSSEFLAVRTAFLDAAHNAGYEHIELPVFEDTSLFA 60

Query: 58  KFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVF 115
           + + +  D  +K +++  D  G+ ++LR + TA + R V ++       P +    GP F
Sbjct: 61  RGVGESTDVVSKEMYTFADRGGRSVTLRPEGTAGVMRAVIQHNLDRGQLPAKLAYHGPFF 120

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHI 167
           R E+   GRFRQ  Q  V+ +G      DAE+  +      ++G            D   
Sbjct: 121 RYERPQAGRFRQLQQVGVEAIGVDDPALDAEVIALADRCFRSIGLDGFRLELTSLGDSTD 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
               R  L   L  + L  + +    L  LR +D       + +                
Sbjct: 181 RPAYRAKLQEFLATLPLDEETQRRAELNPLRVLDDKRPQMQEMLAD-------------- 226

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                      +M   LS    +    +  L++                           
Sbjct: 227 ---------APLMKDHLSDSSREHFETVTGLLED-----------------------MGV 254

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
              I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++ 
Sbjct: 255 EYTINPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLS 306

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             GF +G+ R ++AL++   + +  +    V +  +     +          LR AG+ A
Sbjct: 307 GIGFGLGVDRALLALEAEGKTASTGRR---VDVFGIPMGDAAKRHMAALINELRAAGVAA 363

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           +M  G ++     +K A+R +  LA++ G  E   G + +KDL  G++    + +  +  
Sbjct: 364 DMAYG-NRGLKGAMKAANRAHAQLAVVIGDQELEAGTVAVKDLQLGEQHDVAVADLVTHI 422

Query: 468 EARVA 472
             ++A
Sbjct: 423 RRQLA 427


>gi|260590957|ref|ZP_05856415.1| histidine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536822|gb|EEX19439.1| histidine--tRNA ligase [Prevotella veroralis F0319]
          Length = 453

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 137/479 (28%), Positives = 214/479 (44%), Gaps = 57/479 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D   +E+  RN I D+I+++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFGPEEMAKRNYIFDTIKSVYALYGFQQIETPAMETLHTLMGKYGDEGDKL 63

Query: 65  ---RPNKGVFSLQDDDGQWI---------------SLRYDLTAPLARYVAENFDTIVFPC 106
                N G + L+      +                LRYDLT P ARYV  + + +  P 
Sbjct: 64  LFKVLNSGDY-LKSVSDDELKERNTLKMQTKLCEKGLRYDLTVPFARYVVMHREELQLPF 122

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++      +G+      
Sbjct: 123 KRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTKLGV---RVQ 179

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I INNRKIL GI E IG          + +  AIDKLDK GL+ V   L           
Sbjct: 180 IKINNRKILTGIAEVIGEKDK-----IVDITVAIDKLDKIGLENVNEELRAD-------- 226

Query: 227 TKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                ++ + I  +   + ++   E+ +  + E +K +  G KG  E   I ++++ SG 
Sbjct: 227 ----GISEDAIAKLQPIIKLEGTNEEKLAVIAEALKESETGLKGVEETRFILDMLKTSG- 281

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
             N I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F   
Sbjct: 282 LKNEIQLDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGIFGMP 332

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +   G S G  R+   L +L+       +   +L           +         R  G
Sbjct: 333 GLSGVGISFGADRIYDVLNTLDLYPKESVQGTQLLFINFGEQET--AYCLPIVAAARRTG 390

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           IR EMF   +K    Q+ YA+ +N     + G  E   G + +K++  G++     +  
Sbjct: 391 IRTEMFPDKAK-MKKQMSYANAKNIGFVALAGESEMKEGKVTLKNMTTGEQTLVTPEEL 448


>gi|148359078|ref|YP_001250285.1| histidyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|148280851|gb|ABQ54939.1| histidyl tRNA synthetase [Legionella pneumophila str. Corby]
          Length = 425

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 89/470 (18%), Positives = 179/470 (38%), Gaps = 59/470 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D       +   I  +  N    YG+  I  P++E +    + + +  D  
Sbjct: 4   KIQAIRGMNDVLPDSTSVWRFIEQTFINCLVRYGYKEIRFPIVENTQLFKRTIGEITDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  I+LR + TA   R   E+        + + +GP+FR+E+   GR+R
Sbjct: 64  EKEMYTFNDLNGDSITLRPEGTAGCVRACIEHGLLHNQQQKLWYLGPMFRHERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q  V+ +G +    + E+  +       +G  ++     +    IN R+    IL +
Sbjct: 124 QFNQFGVEALGITGTAIELELISICRRLWADLGFSQSVQLQVNSLGEINERQKYRSILVE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                          +   D   +     +++L  +                 +    ++
Sbjct: 184 YLRDH--------FHILDEDSKRRLDKNPLRVLDSKN---------PDLQQLIQNAPKLI 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L  D ++        ++                              I+  +VRGL+Y
Sbjct: 227 DVLGDDSKEHFQSFCNGLETL-----------------------GIPYSINPVLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +          +     ++  GGRYD LV    G   PA GF++G+ R+ + 
Sbjct: 264 YGQTVFEWVT--------DQLGSQATICAGGRYDMLVEFLGGAPTPAVGFALGLERIFLL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
           +++L     +  +     I  +  + +++ K  +  + +R A    ++    +   F +Q
Sbjct: 316 METLNLLNESNNKQS---IFIIATNEEAILKALVMAESIRNAHPSLDVITNTAGGGFKSQ 372

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREA 469
            K AD+    LA+I G  E +R  + IKDL    +++S  +     + + 
Sbjct: 373 FKKADKSGARLALILGEDEIAREYVSIKDLRTEIEQISIPMTKINEFLQD 422


>gi|78484967|ref|YP_390892.1| histidyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123728060|sp|Q31I05|SYH_THICR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|78363253|gb|ABB41218.1| histidyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 426

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 107/500 (21%), Positives = 198/500 (39%), Gaps = 81/500 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+        RG  D    +    + ++ +  ++ + YGF  I  P++E ++   + +
Sbjct: 1   MSKQ----INAIRGMNDLYGDQSHAFDYLVQTAESVLKQYGFQSIRLPIVEKTELFARSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R V +N        + Y  GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAGCVRAVIQNGLAHNQIQKLYYTGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKIL 175
              GR+RQF Q  V+  G  +   DAE+  + A   E +G++  +  I        R+  
Sbjct: 117 PQKGRYRQFNQFGVEVFGIESVDIDAELIALSARLWERLGLQNLELQINSLGSQAARQAY 176

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
             IL         +L+E        D L +     +++L  +     +           E
Sbjct: 177 RDILVAYFEEHKSQLDE--------DSLRRLSTNPLRILDTKNPDMKA---------LVE 219

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++  L                   A ++ + EL    + +            +  +
Sbjct: 220 AAPKLMDHLD-----------------EASKQHYEELKAHLDDL------GVAYVENPNL 256

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++GI
Sbjct: 257 VRGLDYYNRTVFEWVTTE--------LGAQGTVCAGGRYDGLVEQIGGKPTPAVGFAMGI 308

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGS 413
            RL+  L   E     + E     +  +     +     + ++ +R     I+ +M  G 
Sbjct: 309 ERLMALLMDNEL----VHEENGPDVYMVLAGDSTKRPGLVISEQIRENLPDIKVQMNCGG 364

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             +F +Q K AD+    +A++ G  E ++  + +K L                      Q
Sbjct: 365 G-SFKSQFKKADKSGARIALVLGEDEVNQKQIAVKYLR-----------------EEREQ 406

Query: 474 ITIPISELVSTVKKILQENK 493
             +P  ++V+ +K  L E+K
Sbjct: 407 EMVPWDQMVTLLKTALTESK 426


>gi|237654046|ref|YP_002890360.1| histidyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|237625293|gb|ACR01983.1| histidyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 431

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 106/494 (21%), Positives = 191/494 (38%), Gaps = 71/494 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    +        D +R+  ++YG+ PI  PL+E +    + + +  D  
Sbjct: 4   TLQAVRGMNDILPADAETWEYFEDIVRDWLQSYGYRPIRMPLVEPTPLFKRAIGEVTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
            K ++S +D  +G+ ++LR + TA   R   ++       P R Y  GP+FR+E+   GR
Sbjct: 64  EKEMYSFEDALNGEHLTLRPEGTASCVRAAIQHNLIPAGGPQRLYYYGPMFRHERPQKGR 123

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q  V+ +G +    DAE+ +M A   E +G++     I                +
Sbjct: 124 YRQFHQIGVEALGFAGADTDAELILMCARLWEDLGLEDVALEINSLGSPEERAQHRAALI 183

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              ++  ++L      D   +     +++L  +                 E    +  +L
Sbjct: 184 AHLEQHQDKLD----EDGKRRLYTNPLRILDTKN---------PELQAIVEAAPRLADYL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + +     +   +K                             +I+  +VRGL+YY  
Sbjct: 231 GDESKAHFEAVQVFLKDA-----------------------GIPYRINHRLVRGLDYYNR 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +          +    G++  GGRYDGL  +  G+  PA GF+IGI RL++  ++
Sbjct: 268 TVFEWVTT--------RLGAQGTICAGGRYDGLFEQLGGKPQPAAGFAIGIERLLLLWQA 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                    E     +  +     +        + LR  G    M  G   +F +Q+K A
Sbjct: 320 CGG----EAERPVPDVYVVSVGEAAQRLGFRAAETLREHGFAVLMHCGGG-SFKSQMKKA 374

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           D    P+AI+ G  E + G + +K L                     AQ  + I +LV  
Sbjct: 375 DASEAPVAIVIGEDEAAAGEVGLKPLR-----------------VAGAQQRVAIDDLVEA 417

Query: 485 VKKIL--QENKEEI 496
           +  ++  +E  EE+
Sbjct: 418 MAALMFPEEEDEEV 431


>gi|326803471|ref|YP_004321289.1| histidine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651350|gb|AEA01533.1| histidine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 432

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 102/471 (21%), Positives = 184/471 (39%), Gaps = 60/471 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + P+G  D    ++ I   I  + R+I   Y F+ I TP+ E  D   + + +  D   
Sbjct: 2   IQKPKGTVDILPGQVEIWQAIEKTARDIMAKYRFNEIRTPMFESYDLFARGVGETTDVVT 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGR 124
           K ++   D   + I+L+ + TAP+ R   EN       + P + Y I P+FR E+   GR
Sbjct: 62  KEMYDFYDKGDRHIALKPEGTAPIVRAFIENKLYGPEHIKPYKVYYISPMFRYERPQGGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGILE 180
            RQF Q  V+        +D E   +  + LE++G+K     I        R      L 
Sbjct: 122 QRQFHQLGVEVFDGKTALSDVETIALAWEILESLGVKDLKLVINSLGDNEARLNYREALI 181

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 +++L+E        D   +     +++L  +   D             +    +
Sbjct: 182 NYLKPFEEELSE--------DSKTRLYQNPLRVLDSKDPKDKE---------IVKDAPNI 224

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +LS   ++   ++  L+                          +   +I S +VRGL+
Sbjct: 225 LDYLSEASKERFEQVQSLLASL-----------------------NIPYQIDSNMVRGLD 261

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR--FKGQNVPATGFSIGISRL 358
           YY   ++E +    V           ++ GGG Y GLV       ++VP  GF+IG+ RL
Sbjct: 262 YYQDTIFEIMTNSEVF------GAETTICGGGSYSGLVKELSEGREDVPGFGFAIGMERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I+ L++ +S       +   ++T        +S+     Q LR  G+  E  L + +   
Sbjct: 316 ILLLEAQKSDLAVENPLDIYMVTI---GQSVVSQALQIVQALRRQGLNVEFDL-NQRKPK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            Q + ADR      +  G  E +   + +K++  G+E    I +     + 
Sbjct: 372 KQFRDADRHGAAYTLTLGESELAEKNINVKNMTSGQERHFAIDDVIEHFDQ 422


>gi|317471458|ref|ZP_07930810.1| histidyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316901073|gb|EFV23035.1| histidyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 413

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 90/463 (19%), Positives = 183/463 (39%), Gaps = 56/463 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   +E++ R  + +  +++ E Y    I TP+ E++    + + +  D 
Sbjct: 1   MITQAPRGTKDWFGEEMQKRTYLENVFKDLCETYNIHEIITPVFEHTVLFQRSVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + I+L+ + TA   R   E+       P + + I P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGNRSITLKPEGTAGAIRAYLEHGMQNEPQPVKMFYITPAFRYEKPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKIG 183
            RQ  Q  ++ VG+ +  A+ E+  ++   +  +G+     HI             E + 
Sbjct: 121 LRQHHQFGIEFVGAESPLAEVELITLVTTFINKIGLSDAKLHINSIGCSNCRKDYNEALL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +     ++     R          +   L + + +  +  +  K A  T       + +
Sbjct: 181 AYLHRHEDKLCPTCRERM-------EKNPLRVIDCKVPSCKEIIKDAPRT-------IDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +  +   EL  L+                          +   ++ + IVRGL+YYT
Sbjct: 227 LDEECREHFEELKSLLDSL-----------------------NIPYEVDTGIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK-GQNVPATGFSIGISRLIVAL 362
             V+E +                ++ GGGRYD LV       ++P+ GF +G+ R++  L
Sbjct: 264 KTVFEFV-----------NGEGFTLCGGGRYDNLVHEIDGKASMPSVGFGMGVERILFFL 312

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +   +    +    P+ +       ++ ++       LR  G + E      +    Q+K
Sbjct: 313 EEEGA---ELPAGRPLNLYVGILGKEAKARAYEIVSGLRMEGFKVETDY-LGRGVKAQMK 368

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           YA++      II G  E      ++K++  G+E+   + + ++
Sbjct: 369 YANKLRAQNTIIIGENELKENKGRLKNMESGEEIEISLDDIKN 411


>gi|52841774|ref|YP_095573.1| histidyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|81680468|sp|Q5ZV96|SYH_LEGPH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|52628885|gb|AAU27626.1| histidyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 426

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 90/466 (19%), Positives = 184/466 (39%), Gaps = 51/466 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D       I   I  +  N    YG+  I  P++E +    + + +  D  
Sbjct: 5   KIQAIRGMNDVLPDSTSIWRFIEQTFINCLVRYGYKEIRFPIVENTQLFKRTIGEITDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  I+LR + TA   R   E+        + + +GP+FR+E+   GR+R
Sbjct: 65  EKEMYTFNDLNGDSITLRPEGTAGCVRACIEHGLLHNQQQKLWYLGPMFRHERPQKGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+ +G +    + E+  +       +G                           
Sbjct: 125 QFNQFGVEALGITGTGIELELISICRRLWIDLGFS------------------------- 159

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID-IMVSFLS 245
                 + + L+     +    Q  + +L E   D+     + +    ++    ++   +
Sbjct: 160 ------QSVQLQVNSLGEINERQKYRSILVEYLRDHFQILDEDSKRRLDKNPLRVLDSKN 213

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL++ +    +L+   + G+            +   G       I+  +VRGL+YY   
Sbjct: 214 PDLQQLIQNAPKLID--VLGDDSREHFQSFCNGLETLGIP---YSINPVLVRGLDYYGQT 268

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +     ++  GGRYD LV    G   PA GF++G+ R+ + +++L
Sbjct: 269 VFEWVT--------DQLGSQATICAGGRYDMLVEFLGGAPTPAVGFALGLERIFLLMETL 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQLKYA 424
                +  +     I  +  + +++ K  +  + +R A    ++    +   F +Q K A
Sbjct: 321 NLLNESNNKQS---IFIIATNEEAILKALVMAESIRNAHPSLDVITNTAGGGFKSQFKKA 377

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREA 469
           D+    LA+I G  E ++  + IKDL    +++S  +     + + 
Sbjct: 378 DKSGARLALILGEDEIAKEYVSIKDLRTEIEQISIPMTKINEFLQD 423


>gi|46446019|ref|YP_007384.1| histidine-tRNA ligase [Candidatus Protochlamydia amoebophila UWE25]
 gi|81697685|sp|Q6ME90|SYH_PARUW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|46399660|emb|CAF23109.1| probable histidine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 424

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 103/472 (21%), Positives = 189/472 (40%), Gaps = 57/472 (12%)

Query: 7   LRAELPRGFADCPT-------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           ++  +P G  D          K   + + +  +IR    +YG+  I TPL E ++   + 
Sbjct: 1   MKFSIPPGVFDIIPTNTQEIWKSSYLWDFVERTIRKTVRDYGYQEIRTPLFERTELFQRS 60

Query: 60  LPDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRN 117
           + +  D  +K +++ +D  G+ +SLR + TAP+ R   EN    + P  + + I P+FR 
Sbjct: 61  VGETSDIISKEMYTFEDKGGRSMSLRPEGTAPVMRSFIENQLHTIAPLQKLFYIAPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q   + +G+S+   DAE+  ++    + +G++    +I          
Sbjct: 121 ERAQAGRYRQHHQFGAEAIGNSSPEQDAELIDLLYTLYKRLGLQNLSLNINSIGTISCR- 179

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
                     D L   L  L + D  ++F    +++L  +   D                
Sbjct: 180 --HTFRQALKDYLKPHLNNLSS-DSQNRFETNPLRILDSKNAQDKQ---------IVADA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ FL  D +    +L                        +         +++  +VR
Sbjct: 228 PSILDFLDEDSQIHFEQLK-----------------------KLLKQLKIPYQVNPLLVR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E ++         +     S+GGGGRYDGL+    G ++P+ GF  GI R
Sbjct: 265 GLDYYNKTVFEVVV--------GELGAQNSIGGGGRYDGLLRELGGPDLPSIGFGTGIER 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +I  + +       +       +  +    ++       T  LR  GI  +M   S K  
Sbjct: 317 IIQTMINQGI---PLPSPCHPSLFLIPMGDEAKQLCFTLTHELRQQGIPTQMDF-SGKKL 372

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           G  L+YAD+      ++ G  E     +++K+LA GK+    I       + 
Sbjct: 373 GKVLQYADQIESTYVVVIGENELQTQEIELKELASGKKYKLTIDELAPTLKN 424


>gi|30180061|emb|CAD84061.1| hisS; histidine-tRNA synthetase protein [Nitrosomonas europaea ATCC
           19718]
          Length = 410

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 103/458 (22%), Positives = 173/458 (37%), Gaps = 68/458 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    E  +     D+IR     YG+  + TP++E +D   + + +  D   K +++ 
Sbjct: 1   MNDILPDESGLWAFFEDTIRTWLAAYGYRNLRTPIVEQTDLFVRSIGEVTDIVEKEMYTF 60

Query: 74  QDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D  +G+ ++LR + TA   R V E+      P R Y  GP+FR+E+   GR+RQF Q  
Sbjct: 61  VDHLNGENLTLRPEGTASCVRAVIEHNLLYAGPQRLYYSGPMFRHERPQKGRYRQFHQVG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILDGILEKIGL 184
           V+ +G +    DAE+ +M A     +GI                   R  L   LEK   
Sbjct: 121 VEALGFAGPDIDAELIVMCARLWRLLGISDVRLEISTLGSTESRSVYRARLISYLEKFCD 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D+            D   +     +++L  +       +   GA         +   L
Sbjct: 181 DLDE------------DARRRLKTNPLRILDSK--NPAMREILAGA-------PRLFDDL 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D       L  +++      +  N L                       VRGL+YY  
Sbjct: 220 DEDSLAHFEALQRILRNQDISFEINNRL-----------------------VRGLDYYNR 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +          K    G++  GGRYDGL+++  G+  PA GF++GI R++  +  
Sbjct: 257 TVFEWVT--------DKLGAQGTICAGGRYDGLIAQIGGKPAPACGFAMGIERILALMGE 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +            I  +     +        + LR  G++  +      NF  Q+K A
Sbjct: 309 NGAVG----AHAIPDIYVVHQGEAAAEFSWKVAESLRDDGLKV-VLHSGGGNFKAQMKKA 363

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIK 461
           D      A I G  E   G + IK L +  +++  ++ 
Sbjct: 364 DASGARFAAIIGEDEVVAGQISIKPLREAAEQIRVDLA 401


>gi|71993686|ref|NP_001023373.1| Histidyl tRNA Synthetase family member (hrs-1) [Caenorhabditis
           elegans]
 gi|3879781|emb|CAA93416.1| C. elegans protein T11G6.1a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 520

 Score =  242 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 138/501 (27%), Positives = 229/501 (45%), Gaps = 48/501 (9%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLP 61
           K  K   +  +G  D    +  +RN +L ++   +  YG + I+TP+ E  D L GK+  
Sbjct: 55  KPGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGE 114

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH- 120
           +     K V+ LQD  G+ +SLRYDLT P ARY+A N    +     Y+I  V+R ++  
Sbjct: 115 EG---GKLVYDLQDQGGELLSLRYDLTVPFARYLAMNK---ITNITRYQIAKVYRRDQPV 168

Query: 121 -GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F QCD D  G          C+ + D L    ++  ++ I +N+R IL+G+ 
Sbjct: 169 MSRGRYREFYQCDFDIAGQYDLMLPEAECLGIVDELLT-KLEIGEFFINLNHRLILEGMF 227

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+   D       +  ++DKLDK   + V+  +   +     + T          ++
Sbjct: 228 AVSGIPAKD----FKTICSSVDKLDKTPWEDVEQEMINEKFLT-KEQTGKLGELVRFREL 282

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                +++L + M +L + +      +KG  EL V+ E +   G  + R + S  + RGL
Sbjct: 283 NSDLNNLELLEKMSQLPD-LGQNDKFKKGAEELKVLIEYLNVDGVTTVRYEPS--LARGL 339

Query: 300 EYYTGCVYEAILG--------FPVMNEKQKPVVFGSVGGGGRYDGLVSRFK-GQNVPATG 350
           +YYTG +YEA+              +   +PV  GSV  GGRYDGLV  F    NVP  G
Sbjct: 340 DYYTGAIYEAVAPKALEGTAVENSEDTAGQPVGVGSVAAGGRYDGLVKMFDSKANVPCCG 399

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            S GI RL   +++ +             +       + +   +   +MLR+AGI+ EM 
Sbjct: 400 VSFGIERLFAIMEARQKVAI---RTTQTEVYVASAQKNLVRDRKKLVKMLRSAGIKTEMA 456

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           L ++     Q +YA+ R  PLAI+ G  E   G+++++++    E               
Sbjct: 457 LKANPKLLTQFQYAEERRIPLAIVIGEQELKDGVVKLRNVVTRDE--------------- 501

Query: 471 VAQITIPISELVSTVKKILQE 491
               TI + +L++ V+  L  
Sbjct: 502 ---QTIKLDQLITAVRDTLAA 519


>gi|78223120|ref|YP_384867.1| histidyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|123742840|sp|Q39UD2|SYH_GEOMG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|78194375|gb|ABB32142.1| histidyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 413

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 89/451 (19%), Positives = 172/451 (38%), Gaps = 54/451 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    E+     I  + R ++  YG+  I  P+LE ++   + + D  D   K ++
Sbjct: 6   KGFNDILPGEVERWQHIEATARRVFGLYGYAEIRVPILEKTELFCRSIGDTTDIVEKEMY 65

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFRQFIQ 130
           S  D     +++R + TA + R   E+      P  + Y +GP+FR E+   GR+RQF Q
Sbjct: 66  SFVDKGENAVTMRPEGTASVMRAYIEHKLYAQDPVAKLYYMGPMFRYERPQKGRYRQFHQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              +  G +    DA++  M+      +G+      I          +  +       + 
Sbjct: 126 IGAEVTGVTDPKVDAQVLTMLCHFFAELGLTEPTLQINSLGCPECRPVYREALKSFLRER 185

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            +RL      D   ++    ++ L  + ++ +  + T  A         M+  L    + 
Sbjct: 186 LDRL----CDDCKRRYETNPLRAL--DCKSAHCKEATADA-------PAMLDHLCAGCDD 232

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                   ++                              I++ +VRGL+YYT   +E +
Sbjct: 233 HFAATRRHLE-----------------------RAGTPYSINNRMVRGLDYYTRTTFELV 269

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                           +V  GGRYDGL++   G  VP  GF++G+ R+ + L   E +  
Sbjct: 270 T--------GLLGAQSAVAAGGRYDGLIADLDGPAVPGIGFAMGVERVALLLGQQEFARR 321

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +      +++  +       L+  G+  EM     K+  +Q++ +D+ N  
Sbjct: 322 P-------DLFIAALGTEAQDEAFRLMCGLQRLGVSVEMDY-EGKSLKSQMRRSDKFNSR 373

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +I G+ E + G   +K +  G +    + 
Sbjct: 374 FTLIIGSDEMASGRATLKAMDTGTQSDVLLD 404


>gi|54025634|ref|YP_119876.1| histidyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81679911|sp|Q5YTH9|SYH_NOCFA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|54017142|dbj|BAD58512.1| putative histidyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 422

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 95/480 (19%), Positives = 175/480 (36%), Gaps = 70/480 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K +      P+G  D           + D++       G+  IE P+ E +    + +
Sbjct: 1   MTKTSSF--SAPKGVPDYVPPGSAEFVAVRDALLRAARLAGYGHIELPIFEDTGLFARGV 58

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D   K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 59  GESTDVVTKEMYTFADRGERSVTLRPEGTAGVMRAVIEHGLDRGQLPVKLVYSGPFFRYE 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +      ++G            D      
Sbjct: 119 RPQAGRYRQLQQVGVEAIGVDDPALDAEVIAIADAGFRSLGLDGFRLELTSLGDDTCRPR 178

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R++L   L  + L  + +    L  LR +D         V+ LL +             
Sbjct: 179 YRELLQEFLFGLPLDEETRRRAELNPLRVLDDKRP----EVRELLAD------------- 221

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                   +M+  LS                    E        +   +   G       
Sbjct: 222 ------APLMIDHLS--------------------ESAKAHFEQVLGHLDALGVP---YV 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +   G
Sbjct: 253 VNPRMVRGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQPLSGIG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F +G+ R ++AL++   S  +        +  +     +  +  +    LR AG+R ++ 
Sbjct: 305 FGLGVDRTMLALQAEGKSAGDPARCD---VFGVPLGEAAKQRMVVLAAQLRAAGVRVDLA 361

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            G  +     +K ADR      ++ G  + +   + +KD++ G +    +        + 
Sbjct: 362 YG-GRGVKGAMKAADRSGARYTLVLGDRDLAEDTIGVKDMSTGDQRQVPLGEVVGVLRSE 420


>gi|227893458|ref|ZP_04011263.1| histidyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227864737|gb|EEJ72158.1| histidyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 428

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 107/465 (23%), Positives = 180/465 (38%), Gaps = 57/465 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D    +     ++ +  RN +    +  I TP  E  +   +   D  + 
Sbjct: 1   MRVQKPKGTVDILPDQSGSWQKVEEVARNFFNRANYREIRTPSFENYEIFSRSSGDSSEI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   E+         P   + +   FR E+   
Sbjct: 61  VEKQMYDFNDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GSS   AD +  MM  D L  +G+K    HI        R+     
Sbjct: 121 GRQREFHQIGVESFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRQDYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   +     +++L  +   D                 
Sbjct: 181 LVNYFTPVKDELSE--------DSQRRLRDNPLRILDSKDDRDKKF---------LPDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FL  D +++   + +++          ++L                       VRG
Sbjct: 224 KIRDFLDDDSKQNFETILKMLDQLGIDYVIDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + E        ++ GGGRYD LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDKSLWESAT-----TILGGGRYDHLVEEFNGPATPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+    +         +     +    +  K    T+ LR  G  A+  + + K   
Sbjct: 316 MLVLEKQNPALFKQH---GIDFFITNIGEGTAQKAIEITRSLRKQGFEADFDV-NQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            Q K ADR +    I  G  E + G+L +K LA GK +   +++ 
Sbjct: 372 AQFKKADRDHAKYVITLGEKELANGILNVKRLADGKTIDLNLEDI 416


>gi|225021317|ref|ZP_03710509.1| hypothetical protein CORMATOL_01336 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946050|gb|EEG27259.1| hypothetical protein CORMATOL_01336 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 426

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 104/475 (21%), Positives = 180/475 (37%), Gaps = 68/475 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K   +   P+G  D           + D+  +     G++ IE P+ E +    + +
Sbjct: 1   MTDKKLKKISAPKGVPDYVPPNSAQFIAVRDTFAHHIRLAGYEHIELPIFEDTTLFARGV 60

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D  +K +++  D  G+ ++LR + TA + R V E+       P +    GP FR E
Sbjct: 61  GESTDVVSKEMYTFADRGGRSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLGYYGPFFRYE 120

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGIN 170
           +   GR+RQ  Q  V+ +G    T DAE+  +      ++G+K          D      
Sbjct: 121 RPQAGRYRQLQQVGVEAIGVDDPTLDAEVIALANRCFSSIGLKDYRLELTSLGDATCRPA 180

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R+ L   L K+ L    +    +  LR +D                       + T  A
Sbjct: 181 YREKLQEFLLKLPLDDATRHRAEINPLRVLDDK----------------RPEVQELTADA 224

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L       M+ +LS                     +       ++  +   G       
Sbjct: 225 PL-------MLDYLSP--------------------QAQEHFEAVTGCLDDLG---VTYV 254

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ +   G
Sbjct: 255 INPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQELSGIG 306

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F +G+ R   AL +L++      +   V +  +   + +  +       LR AGIRA+M 
Sbjct: 307 FGLGVDR---ALLALDAEHTQAADPARVDVYGVALGAPAKRRLLTLVNELRAAGIRADMS 363

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            G  +     +K ADR     A++ G  E   G++ +K+L    +    +     
Sbjct: 364 YG-DRGLKGAMKGADRAGARFALVLGDRELDAGLVAVKNLVDHTQTDVPLGQVVE 417


>gi|109899430|ref|YP_662685.1| histidyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|122971704|sp|Q15R57|SYH_PSEA6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|109701711|gb|ABG41631.1| histidyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 426

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 105/502 (20%), Positives = 190/502 (37%), Gaps = 89/502 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC  ++  +      +IR +  +YG+  + TP++E +D   + +
Sbjct: 1   MSKQ----IQAIRGMNDCLPEQSGLWQWAEKAIREVVASYGYQEVRTPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +   ++LR + TA + R   E+        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFADRNDDSLTLRPEGTASVVRAGNEHGLLYNQQQRLWYLGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+  + A   +  GI                   
Sbjct: 117 PQKGRYRQFHQFGVEVFGLAGPDIDAEVIALSARLWKKFGISEQVTLELNSLGSNEARET 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            RK L   L     H D+            D L +     +++L  +     +       
Sbjct: 177 YRKALVEFLLARKEHLDE------------DSLRRLESNPLRVLDSKNPQVQAAIT---- 220

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    ++ +L  + ++  H L E +                            + +
Sbjct: 221 -----DAPSLIDYLDAESKEHFHALCERLDAL-----------------------GIQYR 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G++    G
Sbjct: 253 VNPRLVRGLDYYNRTVFEWVT--------DSLGAQGTVCAGGRYDGLVEQLGGKSTQGVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F+IG+ RL++ L++  +          V +       +         + LR     +R +
Sbjct: 305 FAIGMERLVLMLQASGAEEFVASP---VDVYVTAMGDEVELYALQIAESLRDVMPTLRVQ 361

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G   NF  Q+K AD+    +A++ G  E+    + IK                 +  
Sbjct: 362 THFGGG-NFKKQMKRADKSAARVALVLGETEQQEEQVSIK-----------------FLR 403

Query: 469 ARVAQITIPISELVSTVKKILQ 490
               Q  I  SEL ST+ ++  
Sbjct: 404 EDKPQSRIARSELESTLVELFS 425


>gi|134046820|ref|YP_001098305.1| histidyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|166228581|sp|A4G0V7|SYH_METM5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|132664445|gb|ABO36091.1| histidyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 418

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 117/457 (25%), Positives = 199/457 (43%), Gaps = 43/457 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  + P+G  D   +E++ R  I   +R ++++Y F  I TP  E  + L K   DE R 
Sbjct: 2   LMFQKPKGTRDFLPEEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRT 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F  +D   + + LR +LT+ +AR+    F     P + Y     FR E    GR+R
Sbjct: 62  --QLFVFKDHGNREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q   + +GS    ADAE+  M  D L+ + +   D+ I I +  +L G+ EK  L  
Sbjct: 120 EFWQMGSELIGSKKPIADAEVINMAIDGLKEINM---DFEINIGHLGVLKGVFEKYDLSD 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D+       + R ID   K  ++G+K +L    ++ + + +K      E           
Sbjct: 177 DE----GTEIRRLID---KEDMEGLKTVLSRIESEKNIEISKKVFEVLELK--------- 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              + + +L E +    +  +    L  I E V       +   I+  I RGL+YYTG V
Sbjct: 221 GGREVISKLKEKLAEFESSVEALENLDSILEFV------PHEYIINFGIARGLDYYTGMV 274

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E            K      V GGGRYD L+  F+G+  PA GF+ G  R+++ +   +
Sbjct: 275 FEIY---------GKREGARQVCGGGRYDNLIELFEGEPSPAVGFAYGFDRIMLNIDDFQ 325

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  E   + +  +      L++     + LR AG   E+ L   +     L YA+ 
Sbjct: 326 V------EEEAIFVVPVKSSDMLLNECFKIAKTLRDAGKSVELDL-MGRKLNKALNYANN 378

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +     +I G  + S G + +K++  G++   E+ + 
Sbjct: 379 KGIKKVLIVGENDISEGKVALKNMETGEQSLIELNDI 415


>gi|124025391|ref|YP_001014507.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166228593|sp|A2C182|SYH_PROM1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123960459|gb|ABM75242.1| Histidyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 423

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 105/479 (21%), Positives = 190/479 (39%), Gaps = 64/479 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           RG  D    + +   ++       +   G   I TP+LE ++   + + +  D   K ++
Sbjct: 8   RGMLDLLPAQSQGWQKVESIALEHFSRAGLQEIRTPILEQTELFSRGIGENTDVVGKEMY 67

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           S  D  G+  +LR + TAP+AR + ++      P R +  GP+FR E+   GR RQF Q 
Sbjct: 68  SFDDRGGRSCTLRPEGTAPVARSIIQHGLLNNGPQRLWYRGPMFRYERPQAGRQRQFHQI 127

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            V+ VG ++  +DAE+  +  + L+ VG+  ND  + IN+    +     I         
Sbjct: 128 GVEFVGLASVMSDAEVISIAWNFLKDVGL--NDLTLEINSLGSNED--RNIFKEELKDWL 183

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
            +   L   D   +  +  +++L  +  +               +   +  FLS + +  
Sbjct: 184 NQRFDLLDEDSQKRINVNPLRILDSKNNSTKE---------LLSEAPSLNDFLSSESKTR 234

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
              L EL+                              KI+  +VRGL+YY+   +E   
Sbjct: 235 FDYLQELLVNL-----------------------KIPYKINYNLVRGLDYYSHTAFEIT- 270

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                          +V GGGRYDGL+S   G   P+ G++IG+ RL++       + + 
Sbjct: 271 -------SDHLGSQATVCGGGRYDGLISELGGPQAPSIGWAIGMERLVIL------AGDK 317

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           I +     +  +     +       T  LR++ +  E+   S  +F  Q K AD+     
Sbjct: 318 ILQTKSPDVYVIHKGKKAEQLALEITCQLRSSNLIIELDY-SGSSFSKQFKRADKSRAKW 376

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           A++ G  E S+G L +K L   +            ++    +      +L   +KK++ 
Sbjct: 377 ALVIGEDEVSKGQLLMKKLRDKQ------------KDEESREYIFSKGDLDQLIKKLIA 423


>gi|125980688|ref|XP_001354367.1| GA19519 [Drosophila pseudoobscura pseudoobscura]
 gi|54642675|gb|EAL31420.1| GA19519 [Drosophila pseudoobscura pseudoobscura]
          Length = 518

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 118/485 (24%), Positives = 214/485 (44%), Gaps = 39/485 (8%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++ 
Sbjct: 55  QKFTLKTPKGTRDYAPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED- 113

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     GR
Sbjct: 114 --SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTRGR 170

Query: 125 FRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           +R+F QCD D         ADAE   ++A+ L+ +  +  DY I +N+R++LDG+ E  G
Sbjct: 171 YREFYQCDFDIAGTYDPMLADAECVKIVAEILDTL--EIGDYVIKLNHRQLLDGMFEACG 228

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  +        +  A+DKLDK     V+            +      L     +++  +
Sbjct: 229 VPAES----FRAICSAVDKLDKSPWADVRK-----------EMVTEKGLDEATAEMIGEY 273

Query: 244 LSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +     + E       +K      KG   + ++ +     G +  R+    ++ RGL+
Sbjct: 274 VRLSGGTELVEQLLADPKLKAVPNAVKGLEGMQLLLKYCSIFGLDK-RVSFDLSLARGLD 332

Query: 301 YYTGCVYEAILGFPVM-----------NEKQKPVVFGSVGGGGRYDGLVSRFKGQ--NVP 347
           YYTG +YE +L                 E  +    GSV GGGRYD LV  F  +   VP
Sbjct: 333 YYTGVIYEGVLKAEPSSRSPAKSPQQNGETAEQATVGSVAGGGRYDNLVGMFDTRGKAVP 392

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             G SIG+ R+   L++  +++        V             +       L  AGI+A
Sbjct: 393 CVGVSIGVERIFAVLEARFAASKVKLRTNDVEAYVASAHKGLHEQRLRVLNQLWDAGIKA 452

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E     +     QL++ +    PL ++ G  E ++G+++++++   +E S ++++     
Sbjct: 453 EHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKLREVTTRQETSVKLEDLPGEI 512

Query: 468 EARVA 472
             R  
Sbjct: 513 RRRQQ 517


>gi|297621744|ref|YP_003709881.1| Histidyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297377045|gb|ADI38875.1| Histidyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 480

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 98/463 (21%), Positives = 176/463 (38%), Gaps = 57/463 (12%)

Query: 7   LRAELPRGFADCPT-------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           +  + P G  D          KE  +   +   IR     YGF  I TP+LE ++   + 
Sbjct: 1   MNIKAPPGVFDILPIDPKTPWKESHLWIYVEKVIRETAAQYGFQEIRTPILEKTELFQRG 60

Query: 60  LPDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRN 117
           + +  D  +K ++   D  G+ + LR + TAP+ R   EN  +   P    + IGP+FR 
Sbjct: 61  VGETSDIVSKEMYMFNDRGGRSLCLRPEGTAPVIRSYIENNLSHQVPIHKFFYIGPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q   + +G+ A   DAE+  ++  T   +G++     I     K    
Sbjct: 121 ERAQAGRYRQHHQFGAEVIGTQAPEQDAEVIDLLYTTYRKLGLQNLKVMINSLGDKECRL 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
                     +  ++    L   +   +     +++L  +   D             E+ 
Sbjct: 181 HFRHA---LKEYFSQHKKHLS-EESRQRLDKNPLRILDSKSPQDQEFI---------EKA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ FLS +++     + E +                        +      I+  +VR
Sbjct: 228 PSILDFLSHEVKTHFERVQEYLT-----------------------FLEIPFAINPHLVR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E           ++     S+GGGGRYD L+    G + PA GF  GI R
Sbjct: 265 GLDYYNRTVFEV--------AAEELGAQNSIGGGGRYDSLIKELGGPDQPALGFGTGIER 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +I  L   E+   +           +     +          LR   I A+M   + +  
Sbjct: 317 IIQTLLKQEAPVPSAYRPT---FFLIPLGEKAKRACFKVLHFLRENSIDAQMDF-TGRKL 372

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           G  + YA++       + G  E     +++K++  G+ +S  +
Sbjct: 373 GKVMGYANQIGAKFVAVVGDQELETETVELKNMETGEAISAPL 415


>gi|303253248|ref|ZP_07339397.1| histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307248199|ref|ZP_07530227.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302647930|gb|EFL78137.1| histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306855376|gb|EFM87551.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 423

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 105/494 (21%), Positives = 193/494 (39%), Gaps = 76/494 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I + +RN+   YG+  +  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDCSPTESPLWQWIENKVRNVLAGYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E         R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIERGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+ ++ A   + +GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEVFGIPNPEIDAELIILTARLWKELGI---DQHVSLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                    K  E    L + ++ ++     +++L  + +                    
Sbjct: 173 RANYRSALVKFLENHTALMSDEEKERLVKNPLRILDTKNQA---------LQEVLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  D  +    L  L+                              +++  +VRGL
Sbjct: 224 LLDYLDDDSREHFAHLCHLLDA-----------------------MGITYEVNPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGSQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLGSSK 415
           + ++ +    N  K    V +  +     +        + +R+     G+   M   S  
Sbjct: 313 LLVQEVNKEINLPKA---VDVYVVYSGEGATLNAFQMAERIRSELPQLGV---MTHCSGG 366

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           NF  Q K AD+    +A++ G  E  +  + +KDL  G E                 Q+T
Sbjct: 367 NFKKQFKRADKVEAQIALVIGESEVEQQTVVLKDLQSGAE-----------------QVT 409

Query: 476 IPISELVSTVKKIL 489
           I  ++L++ + K  
Sbjct: 410 IAQADLIAELTKRF 423


>gi|257053054|ref|YP_003130887.1| histidyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691817|gb|ACV12154.1| histidyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 434

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 121/453 (26%), Positives = 187/453 (41%), Gaps = 39/453 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF D    E+     ++D++ +    YGF  I TP LE +    +   +E    + ++S
Sbjct: 6   KGFRDFYPAEMAAHREVIDTVEDTAARYGFREIATPALEETRMYVEKSGEEIV--EDLYS 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +D  G+ ++L  +LT  +AR V E    +  P + Y   P +R E+   GRFR+F Q +
Sbjct: 64  FEDQGGRDVALTPELTPTVARMVVEKQQALSKPIKWYSTRPFWRYEEPQQGRFREFYQTN 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD  GS    ADAE+    AD L  +G+  +D+   +++R IL G+LE      D +   
Sbjct: 124 VDIFGSEEPEADAEILAFAADALTNLGLDADDFDFRVSHRDILGGLLEAFDADVDQRA-- 181

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               +RA+DK  K        LL E            A L ++ +D +  F   D     
Sbjct: 182 ---AIRAVDKSAKIEEAEYYDLLTESGLSYDQAEQFDALLATDDLDELTDFAGTD----- 233

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                              L  +       G       IS    RGL+YYTG V+E    
Sbjct: 234 -----------RVADAVENLEAVLAAAEDFGVRE-YTTISLETARGLDYYTGVVFECFDS 281

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI--VALKSLESSTN 370
              ++         +V GGGRYD L+  F GQ  PA G + G+      + L+       
Sbjct: 282 VGEVS--------RAVFGGGRYDDLIESFGGQPTPAVGVAPGVMNSTLPLLLQRAGVWPE 333

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                   ++       D+ S      + LR  G   E  + S ++FG QL YAD  N  
Sbjct: 334 EELSTDYYVLQV----GDTRSVASRIARELRERGHVVETDV-SDRSFGGQLDYADSINAE 388

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AII G  +     + IKD+A G ++   + + 
Sbjct: 389 TAIIVGERDLENDEITIKDMASGDQVQVPVADF 421


>gi|145549355|ref|XP_001460357.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428186|emb|CAK92960.1| unnamed protein product [Paramecium tetraurelia]
          Length = 772

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 127/472 (26%), Positives = 219/472 (46%), Gaps = 36/472 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR 65
           L  + P+G  D   +++ IR +    I +++E +G   I+TP+ E  ++L GK+  +   
Sbjct: 33  LAVKNPKGTRDFLPQQMVIRRQAFKIITDVFEQHGAVEIDTPVFELKETLIGKYGEEG-- 90

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K ++ LQD  G+ +SLRYDLT P ARY+A +    +             N     GRF
Sbjct: 91  -GKLIYDLQDQGGEILSLRYDLTVPFARYLATHGYKKLKRYHIG-KVYRRDNPSIQQGRF 148

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F QCD D  G +         + + D +    +    + I I+NRK+LD +++  G+ 
Sbjct: 149 REFFQCDFDIAGENDPMVADAELIKIIDQIFT-KLDLGPFQIKISNRKLLDAMIQIAGIP 207

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 +   V  +IDKLDK   + ++  L E              +T EQ DI+   + 
Sbjct: 208 ----KTQFKTVCSSIDKLDKQPWKEIRQELTEK-----------KGVTEEQADILSKMVQ 252

Query: 246 IDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  E  + + +L E       G++  +E+ ++  L++      N +    ++ RGL+YYT
Sbjct: 253 LRGEPFQLIQQLKEQKIFEQQGKEALDEMELLFNLLKYMNGLKN-VIFDLSLARGLDYYT 311

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G + E +L              GS+ GGGRYD LV  F   ++P  G SIGI R+   L+
Sbjct: 312 GLIQETVLLG---------GQLGSISGGGRYDELVGMFSKNSIPCVGASIGIERIFAILE 362

Query: 364 SLESSTN---NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                +       +   V+ T    + D  ++      +L + GI+A++    + N G Q
Sbjct: 363 EKYKKSGVVLRENQSDCVVATIPSKNIDMNAEKFKIYDLLWSNGIKADVCYKLNWNLGKQ 422

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           L YA+ +  P AI+ G  E  + +++ KD  + KE +  +K+   + + RV 
Sbjct: 423 LTYANDQQIPFAIVIGEDEVKQEVVKFKDFVEKKEETVNLKDLVQFIKQRVG 474


>gi|319442155|ref|ZP_07991311.1| histidyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 432

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 99/474 (20%), Positives = 181/474 (38%), Gaps = 69/474 (14%)

Query: 3   KKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
           K  K++    P+G  D         + +  +   +  N G+  IE P+ E +    + + 
Sbjct: 6   KSAKIQPFAAPKGVPDYVPPASVDFHAVRSTFETVIHNSGYGHIELPVFEETALFARGVG 65

Query: 62  D-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEK 119
           +  D  +K +++ +D  G+ ++LR + TA + R V E+       P +    GP FR E+
Sbjct: 66  ESTDVVSKEMYTFEDRGGRSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLTYSGPFFRYER 125

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINN 171
              GR+RQ  Q  V+ VG      DAE+  +      A+G            D +     
Sbjct: 126 PQAGRYRQLQQVGVEAVGVDDPALDAEVVGLADRCFRALGLTGYRLELTSLGDDNCRPAY 185

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
           RK L   L  + L  + +    +  LR +D                       +    A 
Sbjct: 186 RKTLQDFLFALPLDEETRKRAEINPLRVLDDK----------------RPEVQEMLVDAP 229

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           L  +        L  +  +    +  L+                               +
Sbjct: 230 LMPD-------HLCDNCREHFETVTGLLDD-----------------------MGVEYVL 259

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   GF
Sbjct: 260 NPRLVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLSGIGF 311

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            +G+ R ++AL +   +  + +    V +  +    D+  K  +    LR AG+ A+M  
Sbjct: 312 GLGVDRTVLALAAEGVTPTSGRR---VDVYGVPMGVDAKKKLAVIIDKLRRAGVSADMSY 368

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           G  +     +K ADR     A++ G  E + G + ++DL+   +    +++   
Sbjct: 369 G-DRGLKGAMKGADRAGARFALVLGEQELADGTVVLRDLSSRDQHEVALQDVIE 421


>gi|291287346|ref|YP_003504162.1| histidyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884506|gb|ADD68206.1| histidyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 420

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 96/466 (20%), Positives = 177/466 (37%), Gaps = 55/466 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF-LPDEDRPN 67
            +  +GF D    E R   ++    +  ++++ +     P+LE  +   +      D   
Sbjct: 2   YKKVKGFRDIYGLESRYWQKVEKIFKETFKSFNYQEFYLPVLEKIEVFDRGIGGSTDIVE 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +F+ +D DG  ++LR + TA + R   EN         + Y IGP+FR E+   GRFR
Sbjct: 62  KEMFAFEDRDGTNVALRPEGTASIVRAYVENKLYNPPATSKYYYIGPMFRRERPQKGRFR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI--KRNDYHIGINNRKILDGILEKIGL 184
           QF Q  ++  GS+    DA++  ++      +GI    +     I   +      EK+  
Sbjct: 122 QFTQAGIEVFGSAGPAVDADVVNVLYTLACNLGIEEFVSMEINSIGCPECRPAYNEKLIA 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           + +D            D L +     +++L  + + D     TK A +        +  L
Sbjct: 182 YLNDNKEGL-----CEDCLRRLNKNPMRIL--DCKNDGCKAITKNAPVA-------LDHL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + E+  + +   +                               ++  +VRGL+YY  
Sbjct: 228 CGECEEHFNGVRNYLDTL-----------------------GVPYNVNPMMVRGLDYYVR 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +          K     +VG GGRYDGL+    G + P  GF+ GI R++     
Sbjct: 265 TAFELVTN--------KLGSQSAVGAGGRYDGLIQLLGGPDTPGIGFATGIDRMVAL--- 313

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +     ++   +    +     S  K       +R+AGI A+M     +    Q   A
Sbjct: 314 --AMLKETEKENEIDAFVVSFKDISDKKALKMVNDMRSAGISADMDYDF-RKMKKQFSLA 370

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D+      +I G  E ++G   +KD+  G +    ++    +   +
Sbjct: 371 DKNGARFTVILGEDEMNKGTAAVKDMETGGQEDVMLEKTIEYISDK 416


>gi|309972472|gb|ADO95673.1| Histidyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 423

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 104/484 (21%), Positives = 192/484 (39%), Gaps = 74/484 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ ++     +A+G                   N
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIILTYRLWKALGIDQHVTLQLNSIGSLEARAN 175

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L G LE      +D+  ERL+               +++L  +             
Sbjct: 176 YRSALVGFLENHQDLMNDEEKERLV------------RNPLRILDTKN---------PEL 214

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +    ++ +L  +  +   +L  L+                            + +
Sbjct: 215 QKVLDNAPKLLDYLDDESREHFEQLCSLLDA-----------------------VGIQYE 251

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V GGGRYDGLV +  G   P+ G
Sbjct: 252 INPKLVRGLDYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIG 303

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++ +     N+     V I  +     ++       + +R+    +   
Sbjct: 304 FAMGLERLVLLVQEVN---PNVPAKSAVDIYVVYQGEGAILAAFELAEKVRSELPHLNT- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWR 467
           M   S  NF  Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + 
Sbjct: 360 MLHCSGGNFKKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYL 419

Query: 468 EARV 471
           + + 
Sbjct: 420 QTQF 423


>gi|154496106|ref|ZP_02034802.1| hypothetical protein BACCAP_00390 [Bacteroides capillosus ATCC
           29799]
 gi|150274661|gb|EDN01725.1| hypothetical protein BACCAP_00390 [Bacteroides capillosus ATCC
           29799]
          Length = 465

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 139/491 (28%), Positives = 233/491 (47%), Gaps = 34/491 (6%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            +++     GF +    +  + +R++  +R  Y  YGF P++TP +E S+ L      E 
Sbjct: 2   ERIKPRTLSGFMELLPADQVLFDRMVAILRESYALYGFTPLDTPAIEASEVLLAKGGGE- 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              K ++  Q      +SLR+DLT PLA+YVA +++ + FP R ++IG V+R E+   GR
Sbjct: 61  -TEKQIYRFQ-KGDSDLSLRFDLTVPLAKYVALHYNELSFPFRRFQIGKVYRGERAQRGR 118

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           FR+F Q D+D +G        E  +          +    + I +NNR +L+G+   +GL
Sbjct: 119 FREFYQADIDVIGDGKLDIINEAEIPSIIYRAFTALGLRRFKIRVNNRMVLNGLFALLGL 178

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                  +   V+R IDKL+K G   VK +L +              ++++  D ++S L
Sbjct: 179 E-----QQAGDVMRTIDKLEKIGPDKVKAILVDDFA-----------VSADTADTLLSLL 222

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S     +  E ++        + G  EL  + + +   G  ++   +  TI RGL+YYTG
Sbjct: 223 SAADPMAALEPFK--GKNELFDLGVEELNTVVKYMAAFGVPADHFMVDLTIARGLDYYTG 280

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            VYE ++              GS+  GGRYD L   +  + +P  G SIG++RL   L+ 
Sbjct: 281 TVYETVMLD--------HPEVGSICSGGRYDNLAEYYTDKQLPGVGISIGLTRLFYVLQE 332

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +    +      VLI  M  D   LS    +   LR  G+RA++     K F  +L YA
Sbjct: 333 QKMLNASNAAPADVLILPMTED---LSAAISFATALRAQGVRAQLH-CEQKKFKQKLNYA 388

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           ++ + P A   G  E   G + +K+L  G + + E +  +   +    Q+T+P++E VS 
Sbjct: 389 NKLSIPFAAFLGEDEVKAGTVTVKNLLMGDDFTEE-EKADMESQGFFKQVTLPVAEAVSY 447

Query: 485 VKKILQENKEE 495
           VK  L + K++
Sbjct: 448 VKNCLSDPKDD 458


>gi|54297456|ref|YP_123825.1| histidyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81679478|sp|Q5X519|SYH_LEGPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|53751241|emb|CAH12652.1| histidyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 426

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 86/465 (18%), Positives = 174/465 (37%), Gaps = 49/465 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D       +   I  +  N    YG+  I  P++E +    + + +  D  
Sbjct: 5   KIQAIRGMNDVLPDSTSVWRFIEQTFINCLVRYGYKEIRFPIVENTQLFKRTIGEITDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  I+LR + TA   R   E+        + + +GP+FR+E+   GR+R
Sbjct: 65  EKEMYTFNDLNGDSITLRPEGTAGCVRACIEHGLLHNQQQKLWYLGPMFRHERPQKGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+ +G +    + E+  +       +G             + +   +  +G   
Sbjct: 125 QFNQFGVEALGITGTAIELELISICRRLWTDLGFS-----------QSVQLQVNSLGEIN 173

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + +    ++V    D          K  L +                 +    ++  L  
Sbjct: 174 ERQKYRSILVEYLHDHFHILDEDS-KRRLDKNPLRVLDSKNPDLQHLIQNAPKLIDVLGD 232

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D  +        ++                              I+  +VRGL+YY   V
Sbjct: 233 DSREHFQSFCNGLETL-----------------------GIPYSINPVLVRGLDYYGQTV 269

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          +     ++  GGRYD LV    G   PA GF++G+ R+ + +++L 
Sbjct: 270 FEWVT--------DQLGSQATICAGGRYDMLVEFLGGAPTPAVGFALGLERIFLLMETLN 321

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQLKYAD 425
               +  +     I  +  + +++ K  +  + +R A    ++    +   F +Q K AD
Sbjct: 322 LLNESNNKQS---IFIIATNEEAILKALVMAESIRNAHPSLDVITNTAGGGFKSQFKKAD 378

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREA 469
           +    +A+I G  E +R  + IKDL    +++S  +     + + 
Sbjct: 379 KSGARMALILGEDEIAREYVSIKDLRTEIEQISIPMTKINEFLQN 423


>gi|256851204|ref|ZP_05556593.1| histidyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260660628|ref|ZP_05861543.1| histidyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934671|ref|ZP_06339914.1| histidine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297206070|ref|ZP_06923465.1| histidine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256616266|gb|EEU21454.1| histidyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548350|gb|EEX24325.1| histidyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301246|gb|EFA93547.1| histidine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149196|gb|EFH29494.1| histidine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 426

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 107/471 (22%), Positives = 179/471 (38%), Gaps = 57/471 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G  D   +      ++    R+ ++   +  I TP  E  +   +   +  D 
Sbjct: 1   MKVQKPKGTVDILPEVSGNWEKVEQIARDFFKQANYREIRTPSFESYEVFSRSSGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D  G+ I+LR + TA + R   EN         P   Y I  +FR E+   
Sbjct: 61  VEKEMYDFNDKGGRHIALRPEGTAGVVRSFVENKMYGPDVVKPFNVYYIESMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q   ++ GS+   AD E  MM  D L  +G+K  + HI      + R+     
Sbjct: 121 GRQREFHQIGCESFGSNNPLADIETIMMGNDLLNKLGVKNFELHINSLGNEDVRQKYHDA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L+E        D   + G   +++L  +   D                 
Sbjct: 181 LVDYFTPVKDQLSE--------DSQRRLGKNPLRILDSKEEQDKQF---------LPNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +V +L  + + +   + + +          ++L                       VRG
Sbjct: 224 RIVDYLDDESKANFKYITDALDKLGIKYVLDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    +      V      GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVADTDLWASPTTV-----LGGGRYNHLVEEFGGPETPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+        +     +     +    +  K     + LR  G + +  +   K   
Sbjct: 316 MLVLEKQN---PELFADTGIDFFIANIGEGTAMKSVELARTLRKQGKKVQYDVDQ-KKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           NQ K ADR +    I  G  E + G + IK LA GK++        +  EA
Sbjct: 372 NQFKKADRVHAEFVITLGEKELAEGNVSIKRLADGKQIKFSWDEMNNISEA 422


>gi|300864649|ref|ZP_07109507.1| Histidyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300337398|emb|CBN54655.1| Histidyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 427

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 95/473 (20%), Positives = 178/473 (37%), Gaps = 60/473 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +   G  D  + EI    R+    R I     +  I TP+ E +    + + +  D  
Sbjct: 3   TIKTLPGTRDILSPEIGYWQRLEAIAREILAKAAYREIRTPIFEQTSLFERGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++ +D   + I+LR + TA + R   EN         R +  GP+FR E+   GR 
Sbjct: 63  GKEMYTFKDKGDRSITLRPEGTAGVVRSFIENSLDAQGGLQRLWYTGPMFRYERPQAGRM 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKILDGILEK 181
           RQF Q  V+ +G++   AD E+  +  D L+ +G+       +      +R+     L  
Sbjct: 123 RQFHQLGVEVLGTADPRADVEVIAIATDILKTLGLTNLGLDLNSVGNKEDRQNYRQALID 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 ++L++        D  ++     +++L  +                +     ++
Sbjct: 183 YLTPYKEELDQ--------DSQNRLIRNPLRILDSKNPRTQE---------IAADAPSIL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  +  +   ++ +++                            + +++  +VRGL+Y
Sbjct: 226 DYLGENSRRHFEKVQQMLTDL-----------------------GIKYQLNPRLVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E I                +V GGGRYDGLV    G + PA G+++G+ RLI+ 
Sbjct: 263 YTYTAFEII--------SDDLGAQATVCGGGRYDGLVKELGGPDTPAVGWAMGLERLIL- 313

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                           +    +     +  +  +  Q LR+ G   E+ L S   F  Q 
Sbjct: 314 ----LLQQLQPAPTNTLDFYIVSRGDRAEVQAVLLAQKLRSFGFSLEIDL-SGSAFKKQF 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             ADR      +I G  E     +++K +A  ++ +    +     E    QI
Sbjct: 369 GRADRSGAVACLIIGDEEAESHSVKLKWMASKEQSAIAQSDLLEKAEELRCQI 421


>gi|159905440|ref|YP_001549102.1| histidyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|229558695|sp|A9A947|SYH_METM6 RecName: Full=Histidyl-tRNA synthetase
 gi|159886933|gb|ABX01870.1| histidyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 418

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 111/460 (24%), Positives = 192/460 (41%), Gaps = 49/460 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  + P+G  D   +E++ R  I   +R ++++Y F  I TP  E  + L K   +E R 
Sbjct: 2   LMFQKPKGTRDFLPEEMKKRKNIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGEEIR- 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +F  +D   + + LR +LT+ +AR+    F     P + Y     FR E    GR+R
Sbjct: 61  -KQLFVFKDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q   + +GS    ADAE+  +  + L+ + +   D+ I I +  +L G+ EK  L  
Sbjct: 120 EFWQMGSELIGSKKPIADAEVINLAIEGLKEINM---DFEINIGHLGVLKGVFEKYDLSD 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK--GANLTSEQIDIMVSFL 244
           D+                      ++ L+ +   D          +    E  + +   L
Sbjct: 177 DEG-------------------NEIRRLIDKEDMDGLKTALSRIESEKNIEISEKVFEVL 217

Query: 245 SID-LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            +    + + +L E +    +       L  I E V       +   I+  I RGL+YYT
Sbjct: 218 ELKGGREVISKLKEKLSEFESSVTALENLDSILEFV------PHEYIINFGIARGLDYYT 271

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+E            K      V GGGRYD L+  F+G+  PA GF+ G  R+++ + 
Sbjct: 272 GMVFEIY---------GKREGARQVCGGGRYDNLIELFEGEPSPAVGFAYGFDRIMLNID 322

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E       E   + +  +      L++     + LR AG   E+ L   +     L Y
Sbjct: 323 DFEV------EEESIFVVPVKSSDMLLNECLKIAKTLRDAGKAVELDL-MGRKLNKALNY 375

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           A+ +     +I G  +   G + +K++  G++   E+K+ 
Sbjct: 376 ANTKGIKKVLIVGENDILEGKVALKNMETGEQSLIELKDI 415


>gi|134098606|ref|YP_001104267.1| histidyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291008197|ref|ZP_06566170.1| histidyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|166228608|sp|A4FBB7|SYH_SACEN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|133911229|emb|CAM01342.1| histidyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 420

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 105/493 (21%), Positives = 187/493 (37%), Gaps = 86/493 (17%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
               P+G  +    E      + +++ +     G+  IE PL E +    + + +  D  
Sbjct: 3   TFNAPKGIPEYFPPESAAFLAVRETLADAARRAGYGYIELPLFEDTTLFARGVGESTDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRF 125
           +K +++  D  G+ ++LR + TA + R V EN       P + Y  G  FR E+   GR+
Sbjct: 63  SKEMYTFADRGGRSVTLRPEGTAGVTRSVIENGLDRGQLPVKLYYSGAFFRYERPQAGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDG 177
           RQ  Q  V+ +G      DAE+  +  +    +G            D     + R  L  
Sbjct: 123 RQLQQLGVEAIGVDDPALDAEVIAIADEGYRRLGLTGYRIELTSLGDETCRPSYRAKLQE 182

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            L  + L  D +    L  LR +D         V+ LL +                    
Sbjct: 183 FLRGLPLDEDTRKRAELNPLRVLDDKRP----EVRELLAD-------------------A 219

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
            +MV  LS++ ++   ++   +                                +  +VR
Sbjct: 220 PLMVDHLSVEAKEHYEQVKTHLSDLGVA-----------------------FTENPRLVR 256

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYT   +E +                 +GGGGRYDGL++   GQ +   GF +G+ R
Sbjct: 257 GLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAELGGQELSGVGFGLGVDR 308

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
            ++A ++   +  +        +  +     +  +       LR AG+RA++  G  K+ 
Sbjct: 309 TLLACQAEGLAVGDQARCD---VYCVPLGEAAKRRLVTIAGGLRGAGVRADVAYG-GKSL 364

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
              +K ADR     A++ G  +   G  Q+KDLA G++                    +P
Sbjct: 365 KGAMKGADRSGARFALVLGERDLEAGSAQLKDLASGEQ------------------RPVP 406

Query: 478 ISELVSTVKKILQ 490
           + + V+ V++ LQ
Sbjct: 407 LDDAVAAVREALQ 419


>gi|325181478|emb|CCA15912.1| histidyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 950

 Score =  241 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 117/472 (24%), Positives = 204/472 (43%), Gaps = 33/472 (6%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + ++ +G  D    ++++R ++L+ IR+++  +G   I TP+ E  ++L     ++   +
Sbjct: 496 KPKIAKGTLDFLPYQMQLREKVLNRIRSVFRAHGGQEIATPVFELKETLTGKYGED---S 552

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+ ++LRYDLT P AR++A +    +             N +   GRFR+
Sbjct: 553 KLIYDLADQGGELLALRYDLTVPFARFMAMHSPGNIKRFHIA-RVYRRDNPQMARGRFRE 611

Query: 128 FIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           F QCD D  G  A      E+  +  + L         + I +++R +LD IL   G+  
Sbjct: 612 FFQCDFDIAGFYASMLPDAEVISVGIEVLLQFQTWIGSFKIKLSHRVLLDAILAICGVP- 670

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   +  AIDKLDK     V+            +      L  E  D + +F+  
Sbjct: 671 ---SAKFRTICSAIDKLDKESWDTVR-----------SEMVDEKGLAPEAADKIAAFVCK 716

Query: 247 DLE--KSMHELYEL--VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                + + EL +L   + + A  K   EL  + E +R        I    ++ RGL+YY
Sbjct: 717 VGRPLELLAELKQLQAFQRSEAPTKALEELETLFEYLRAMDVLQ-HISFDLSLARGLDYY 775

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIV 360
           TG +YE +L  P           GS+  GGRYD L  +    GQ +P  G SIGI RL  
Sbjct: 776 TGLIYEFVLTDPENQH------VGSIAAGGRYDELVGIFSATGQQIPCVGISIGIERLFS 829

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            ++S   +  + K      +      + S+S      + L  A I A++    +  F  Q
Sbjct: 830 IVQSKAIAEESKKFQSSTQVLVASATACSMSIKLEICKELWRANIAAQVMQLENPKFTKQ 889

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           L +A   + P  I+ G  E     +++K +A  +E +    +  +    + +
Sbjct: 890 LHFALENSIPFMIVIGQDELDNQQVKVKTIASKEEQTVSRASMWTSERKKKS 941


>gi|320594248|gb|EFX06651.1| histidyl-tRNA mitochondrial precursor [Grosmannia clavigera kw1407]
          Length = 496

 Score =  241 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 110/513 (21%), Positives = 210/513 (40%), Gaps = 57/513 (11%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K   ++ ++P+G  D    +  IR+ I  ++ +++  +G   ++TP+ E  + L     
Sbjct: 15  AKAAAVQLKVPKGTRDWTGADSIIRDSIFQTVTDVFRRHGAVALDTPVFELKEVLAGKYG 74

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           ++   ++ ++ L D  G+  +LRYDLT P AR++A N    V   R Y I  V+R ++  
Sbjct: 75  ED---SRLIYDLADQGGELCALRYDLTVPFARWLAMNK---VQQFRRYHIAKVYRRDQPA 128

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
             R R       D   +           ++    E     + D  + +N+R+ILDGI   
Sbjct: 129 VARGRMREFYQCDFDIAGQYDRMIPDAEILRVVHEVFAALQQDIVVKLNHRQILDGIFAV 188

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  D    +   +  A+DKLDK     V+  + E              L     D + 
Sbjct: 189 SGVPDD----KIRTISSAVDKLDKLPWAEVRKEMVEE-----------KGLAEVVADQIG 233

Query: 242 SFLSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
            ++    +     ++      +      ++G  ++ +++  +   G  S++I    ++ R
Sbjct: 234 DYVKHSGDIATVVALLRADARLAADPNIQQGVADMELLATYLDAFGVPSSQISFDLSLCR 293

Query: 298 GLEYYTGCVYEAIL----------------GFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
           GL+YYTG ++E I+                     ++  +    GS+  GGRYD LV  +
Sbjct: 294 GLDYYTGLIFEVIVRPTAEEAEEASAQDRKKSKSKSKAAEEPQVGSIAAGGRYDNLVGMY 353

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS-----LSKYQMY 396
               +P  G S G+ R+   LK+        + +    +  M   + +     L++    
Sbjct: 354 GKTQIPCVGISFGVDRIFTILKARREKEAGRQRVRETDVYVMAFGAGAGFTGLLTERMRI 413

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + L  AGI+AE    +      Q K A+    PL +I G  E ++G +++K L  G   
Sbjct: 414 ARRLWDAGIKAEFVAKTKPRLPQQFKAAED--VPLGVILGEDELAQGQVRLKMLGTGAAG 471

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKIL 489
             + K+             +   +L + +KK+L
Sbjct: 472 EADEKDR---------GQLVAEEDLAAEIKKLL 495


>gi|284991589|ref|YP_003410143.1| histidyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064834|gb|ADB75772.1| histidyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 420

 Score =  241 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 94/472 (19%), Positives = 178/472 (37%), Gaps = 68/472 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  D    E      + +++       G+  +ETP+ E+++   + + +  D   K +
Sbjct: 7   PKGTFDVLPPESERFLAVRETLTAPLRRAGYGYVETPVFEHTEVFSRGVGESTDVVTKEM 66

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D  G+ ++LR +LTA L R   E+       P + + +G  FR E+   GR+R F 
Sbjct: 67  YTFDDRGGRSLTLRPELTAGLMRAFIEHRLHTGALPVKLWTVGSAFRYERPQAGRYRHFT 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEK 181
           Q D++ +G      DAE+  +       +G            D       R+ L   L+K
Sbjct: 127 QVDMEALGVDDPALDAEVVALGVQGFRDLGLTDFELLLTSLGDATCRPQYREQLVTYLDK 186

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + L  + +    +  LR +D         V+  L                   +   +MV
Sbjct: 187 LDLDEETRRRAAINPLRVLDDKRP----EVQAQL-------------------DDAPLMV 223

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             LS         + + +                                +  +VRGL+Y
Sbjct: 224 DHLSDSTRAHYDAVRQHLTDL-----------------------GVTWTEAPRLVRGLDY 260

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E +                ++GGGGRYDGL +   G +V   G+++G+ R ++A
Sbjct: 261 YTKTTFEFV--------HHGLGAQSAIGGGGRYDGLSAALGGPDVSGIGYAVGVDRTLLA 312

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +++      ++     V    +    ++          LR AG+ A+   G  +     +
Sbjct: 313 VQAEGL---DVGTATGVQAFVVPLGEEAKRLAVRLVGQLREAGVSADTVYG-GRGLKGAM 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K ADR      ++ G  + + G+ Q+KD+  G++    +        A V +
Sbjct: 369 KAADRSGASHVVVIGERDLAEGVGQLKDMRTGEQRPVPVGELFDAVRASVGE 420


>gi|24643059|ref|NP_573305.1| Histidyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|22832509|gb|AAN09471.1| Histidyl-tRNA synthetase, isoform B [Drosophila melanogaster]
          Length = 563

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 113/506 (22%), Positives = 214/506 (42%), Gaps = 58/506 (11%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYS---------- 53
             K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E            
Sbjct: 76  NQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKVSSPGSHWSG 135

Query: 54  ---------DSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
                    + L     ++   +K ++ L+D  G+ +S+RYDLT PLARY+A N  + + 
Sbjct: 136 MILFKTMRIEVLTGKYGED---SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIK 192

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
                       N     GR+R+F QCD D  G+         C+ +   +    +   D
Sbjct: 193 RYHIA-KVYRRDNPAMTKGRYREFYQCDFDIAGTYDPMLPDAECVKIVSEILDT-LDIGD 250

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
           Y I +N+R++LDG+ +  G+  D        +  A+DKLDK     V+  + +       
Sbjct: 251 YVIKLNHRQLLDGMFQACGVPADS----FRTICSAVDKLDKSPWADVRKEMVDE------ 300

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRK 281
                  L     D +  ++ +     + E     E +K      KG   +  + +    
Sbjct: 301 -----KGLDEAAADRIGEYVRLSGGAELVEQLLANEKLKAVPNAVKGLEGMKQLLKYCSI 355

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP-------------VMNEKQKPVVFGSV 328
            G +  R+    ++ RGL+YYTG +YE +L                   +  +P   GSV
Sbjct: 356 FGLDK-RVSFDLSLARGLDYYTGVIYEGVLKGESATVASPAKTSQQNGEQANEPATVGSV 414

Query: 329 GGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
            GGGRYD L  +   +G+ VP  G SIG+ R+   L++  +++        V +      
Sbjct: 415 AGGGRYDNLVGMFDPRGKAVPCVGVSIGVERIFSVLEARAAASGLKLRTSDVEVYVASAH 474

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                +      +L  AG++AE     +     QL++ +    PL ++ G  E ++G+++
Sbjct: 475 KGLHEQRLKVLNLLWDAGVKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVK 534

Query: 447 IKDLAKGKELSREIKNNESWREARVA 472
           ++++   +E + ++++  +    R  
Sbjct: 535 LREVTTREETNVKLEDLAAEIRRRQQ 560


>gi|242025558|ref|XP_002433191.1| histidyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212518732|gb|EEB20453.1| histidyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 491

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 118/462 (25%), Positives = 204/462 (44%), Gaps = 26/462 (5%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   +  +G  D   +++ +R  ILD + +I++ +G + I+TP+ E  D L     ++
Sbjct: 47  PKKFILKTAKGTKDYGPQQMALRLNILDKVISIFKLHGAETIDTPVFELKDVLTGKYGED 106

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L D  G+ +SLRYDLT P ARY+A N    +   +         N     G
Sbjct: 107 ---SKLIYDLADQGGEKLSLRYDLTVPFARYLAMNKIVNIKRYQIA-KVYRRDNPALTRG 162

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F+QCD D  G          C+ +   +    I    Y I +N+R+ILDG+ E  G
Sbjct: 163 RYREFVQCDFDISGIYDPMVPDAECLKIITEILD-SINIGKYVIKVNHRQILDGLFETCG 221

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  D    +   V  ++DKLDK   + V+  + E              + S   D +  +
Sbjct: 222 VPND----KFKTVCSSVDKLDKMSWEEVRKEIIEE-----------KGVDSSVADKIGQY 266

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS--NRIKISSTIVRGLEY 301
                   + E     +     +   + L  +   ++        +++    ++ RGL+Y
Sbjct: 267 TLFSGGSELVEKLMKDENLCKSKSSVSGLEGMKLFLKYCHLYGIGDKVVFDLSLARGLDY 326

Query: 302 YTGCVYEAILGFP-VMNEKQKPVVFGSVGGGGRYDG---LVSRFKGQNVPATGFSIGISR 357
           YTG ++EA+L    V++E  +P   GSV GGGRYD    +    K  + P  G SIGI R
Sbjct: 327 YTGVIFEAVLLDQSVLDENGEPAGVGSVAGGGRYDKLVTMFDPSKKTDTPCVGVSIGIER 386

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +   +++  +          V +      +  L +     + L    I+AE F       
Sbjct: 387 IFAVMEAKLAENKETVRTTEVEVFVASAHNGLLEEKIKVCKELWDGKIKAEQFYRQKIKL 446

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            +QL+Y + R  PLA+I G  E  RG+++I+++   +E    
Sbjct: 447 LDQLQYCEERKIPLAVILGGSEIERGVVKIRNVVTREETEVS 488


>gi|325681020|ref|ZP_08160552.1| histidine--tRNA ligase [Ruminococcus albus 8]
 gi|324107249|gb|EGC01533.1| histidine--tRNA ligase [Ruminococcus albus 8]
          Length = 440

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 104/460 (22%), Positives = 174/460 (37%), Gaps = 58/460 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + P+G AD    +    + +        E YGF  I  P  E +    + + +  D   
Sbjct: 4   IQRPKGTADMLPAQAYKWHTVEKLAAETAEQYGFKEIRVPTFEDTGLFIRSVGETTDVVQ 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +F++        +LR + TA + R V EN      FP + Y I   FR+E    GR R
Sbjct: 64  KEMFTVSATGDDTFTLRPEGTAGVMRAVVENGLLNEAFPQKLYYITSCFRHENVQKGRLR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILEKI 182
           +F Q   + VGS    ADA++  +    ++ VG++      +       R      L + 
Sbjct: 124 EFHQFGCEMVGSPDAKADADVISLAKSVMDRVGLQNIKLNINSIGCPTCRANYQKALREY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D L +            K  L+   + L + ++       K A L       ++ 
Sbjct: 184 FTPHRDTLCDTC----------KDRLEKNPMRLLDCKSPICQGIAKDAPL-------IID 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     L + +                          +    I+  IVRGL+YY
Sbjct: 227 YLCEECDAHFKALQKYLS-----------------------LMNIDFDINPRIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  V+E I         +      +V GGGRYDGL++   G+ VPA GF +G+ RLI+ +
Sbjct: 264 TRTVFEFI--------AEGIGAQSTVCGGGRYDGLLNELSGKQVPALGFGMGLERLIMTM 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +         K      +        +  +       LR  G   E  L   +    Q+K
Sbjct: 316 EQQNCDFMEAKTCD---LYIASMGQAAADRAMSLAMELRDEGYFVEYDL-MGRGIKPQMK 371

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           YAD+      I+ G  E   G  ++K++A G++   ++ N
Sbjct: 372 YADKIGSKFVIVIGDSELESGCAKLKNMASGEQTDIKLDN 411


>gi|314936256|ref|ZP_07843603.1| histidine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654875|gb|EFS18620.1| histidine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 425

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 96/466 (20%), Positives = 184/466 (39%), Gaps = 50/466 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   +E      I + +  + + Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IKIPRGTQDILPQESAKWRYIENKLDELMKLYNYKEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   EN        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIENKMQGEPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    E+ G+K     I  I ++       E +  
Sbjct: 122 RQFNQFGVEAIGAENPSIDAEVLAMVMHIYESFGLKHLKLVINSIGDQASRKEYNEALMK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +      +I     D   +     +++L  +   D             +    +  +L
Sbjct: 182 HFE-----PVIDTFCNDCQSRLHTNPMRILDCKIDRDKE---------AVKHAPRITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + +     +   +                                   +VRGL+YYT 
Sbjct: 228 NDESKAYYEAVKHHLD-----------------------QLDINYVEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P            ++ GGGRY+GL+    G      GF++ I RL++AL+ 
Sbjct: 265 TAFELMMDNPN-----YDGAITTLCGGGRYNGLLELLDGPKQTGIGFALSIERLLLALEE 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +   N  ++     +  +     +          LR  G++A+     ++    Q+K A
Sbjct: 320 EDIELNVDEDFD---LFVVTMGKKAEQYSVKLLNDLRKHGVKADKDY-LNRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           DR N    I+ G  E +   + +K+++ G+  + ++    S+    
Sbjct: 376 DRLNAKYTIVIGDQELNNNKIDVKEMSTGETKTIQLDEVVSFFNKE 421


>gi|258404151|ref|YP_003196893.1| histidyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796378|gb|ACV67315.1| histidyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 419

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 100/473 (21%), Positives = 187/473 (39%), Gaps = 59/473 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M    K++     GF D       I +R+  + R ++  YG+  I  PLLE ++   + +
Sbjct: 1   MSTIKKIK-----GFNDLFPPVSAIYSRMEQTAREVFSRYGYYEIRVPLLEKTELFARSI 55

Query: 61  P-DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNE 118
             + D   K +++  D  G+ ++LR + TA + R   EN         R +  GP+FR E
Sbjct: 56  GDETDVVQKEMYTFPDRKGRSLTLRPEATASVVRAYIENKRYASESVSRMFTFGPMFRYE 115

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDG 177
           +   GR RQF Q + + +G+ A  +DAE+ +M+ + L+A+G+      +     R+    
Sbjct: 116 RPQKGRQRQFHQVNCELLGAEAPQSDAELILMLWEYLQALGLDGLHLDLNSLGCRECRPA 175

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             E +G +      + L      D   +     +++L  +          +G     +Q 
Sbjct: 176 YHETLGSYLAGVDADEL----CDDCRRRKTTNPLRVLDCK---------VEGCRSVMQQA 222

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +   L    +     +  ++                               I+  +VR
Sbjct: 223 PRLADHLCSGCQSHFASVRTILD-----------------------RAGIPYTINPRLVR 259

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY    +E +         +      +V GGGRYDGLVS   G  +P TGF+ G+ R
Sbjct: 260 GLDYYQRTTFEVV--------AENIGAQTAVAGGGRYDGLVSDLGGPALPGTGFACGMER 311

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L + L+  E          PV       D ++  +  +  Q LR  G+  E+    +K+ 
Sbjct: 312 LALLLQEQEQ------PGTPVDFFLAVLDDEARDEAILQAQQLRKQGLAGEVGY-EAKSP 364

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            + L++A++      ++ G  E       +K++  G + +   +        +
Sbjct: 365 KSHLRHANKAGAAYCLLLGGQELQEKAFVVKNMQSGAQETVSWEETGRALRQQ 417


>gi|225869430|ref|YP_002745378.1| histidyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511958|sp|C0MGD4|SYH_STRS7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|225702706|emb|CAX00828.1| histidyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 426

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 99/471 (21%), Positives = 176/471 (37%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D           + D  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPVAAAKWQYVEDVARETFKQYHYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQV 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E   M     E +GIK    H+             + 
Sbjct: 121 GRSREFHQIGVECFGSANPATDVETIAMAYHLFERLGIKGVTLHLNSLGNAASRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + E L    + D   +     +++L  + + D          +       ++ 
Sbjct: 181 LIDYLSPMRETL----SKDSQRRLDENPLRVLDSKEKEDK---------IAVANAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  D +     +  +++                         +    I + +VRGL+YY
Sbjct: 228 YLDEDSQAHFDAVRSMLEAL-----------------------AIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I         +      ++  GGRYDGLV  F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFIT--------EVNQSELTICAGGRYDGLVEYFGGPATPGFGFGLGLERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    ++E   V I  +  D++        TQ +R  G   E      +    Q K
Sbjct: 317 DKQGV-ELPVEEGLDVYIAVLGADANV--AALALTQAIRRQGFTVERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     + I  G  E   G   +K     +E++      ++   +  A+
Sbjct: 373 SADTFKAKVVITLGESEIKAGQAVLKHNQTRQEMTVSFDQIQTDFASIFAE 423


>gi|92114972|ref|YP_574900.1| histidyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123265563|sp|Q1QTK7|SYH_CHRSD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|91798062|gb|ABE60201.1| histidyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 428

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 104/480 (21%), Positives = 193/480 (40%), Gaps = 70/480 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   ++  +       I+++ + YG++ I TP+LE +    + + +  D  
Sbjct: 4   KIQAIRGMNDLLPEQSPVWQYFERQIQHLMQRYGYNEIRTPILEQTALFKRSIGEVTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ +D +G  ++LR + TA   R   EN        R +  GP+FR+E+   GR+R
Sbjct: 64  EKEMYTFEDRNGDSLTLRPEGTASCVRAALENGLLYNQTQRLWYQGPMFRHERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDG 177
           QF Q  V+  G      D EM ++ A   +A+G+                    R  L  
Sbjct: 124 QFHQVGVEAYGMLGPDIDFEMILLSARLWDALGLMPHVRLELNSLGSSEARAAYRDALVA 183

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             E      D+            D   +     +++L  +                 E  
Sbjct: 184 YFEAHAEVLDE------------DSRRRLTSNPLRILDSKNPDMAEM---------LEAA 222

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++  L                     ++       ++ ++  +G +     I+  +VR
Sbjct: 223 PRLMDHLD--------------------DESRAHFEQLTAMLDAAGID---YVINPRLVR 259

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY+  V+E                 G+V  GGRYDGLV +  G+  P  GF++G+ R
Sbjct: 260 GLDYYSRTVFEWTTQA--------LGSQGTVCAGGRYDGLVEQLGGKPTPGVGFAMGVER 311

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSS 414
           LI+ L++L+      +    V +T M   +    +  +  + LR A +  EM L      
Sbjct: 312 LILLLETLDLVPEAARSRPDVYLTAMGDTASR--EAMLLGEHLRDA-LP-EMHLQVHCGG 367

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQ 473
            +F +Q+K AD+    +A++ G  E + G + IK L    ++ S   +   +  +A +A+
Sbjct: 368 GSFKSQIKKADKSGARIALMLGDDEIASGSVGIKFLREDREQESVAREALAARLQALLAE 427


>gi|150402786|ref|YP_001330080.1| histidyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166228582|sp|A6VHK3|SYH_METM7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|150033816|gb|ABR65929.1| histidyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 418

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 112/460 (24%), Positives = 192/460 (41%), Gaps = 49/460 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P+G  D   +E++ R  I   +R ++++Y F  I TP  E  + L K   DE R 
Sbjct: 2   IMFQKPKGTRDFLPEEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRT 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F  +D   + + LR +LT+ +AR+    F     P + Y     FR E    GR+R
Sbjct: 62  --QLFVFKDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q   + +GS+   ADAE+  M  + L+ + +   D+ I I +  +L G+ EK  L  
Sbjct: 120 EFWQMGSELIGSNKPIADAEVINMAIEGLKEINM---DFEINIGHLGVLKGVFEKYDLSD 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK--GANLTSEQIDIMVSFL 244
           D+                      ++ L+ +   D          +    E  + +   L
Sbjct: 177 DEG-------------------NEIRRLIDKEDMDGLKSALNRIESEKNIEISEKVFEVL 217

Query: 245 SID-LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            +    + + +L E +    +       L  I E V       +   I+  I RGL+YYT
Sbjct: 218 DLKGGREVISKLKEKLAEFESSIAALENLDSILEFV------PHEYIINFGIARGLDYYT 271

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+E            K      V GGGRYD L+  F+G+  PA GF+ G  R+++ + 
Sbjct: 272 GMVFEIY---------GKREGARQVCGGGRYDNLIELFEGEPSPAVGFAYGFDRIMLNID 322

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E       E   + +  +      L++     + LR AG   E+ L   +     L Y
Sbjct: 323 DFEV------EEESIFVVPVKSSDMLLNECLKIAKTLREAGKAVELDL-MGRKLNKALNY 375

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           A+ +     II G  +   G + +K++  G++   E+K+ 
Sbjct: 376 ANTKGIKKVIIVGENDILEGKVALKNMETGEQSLIELKDI 415


>gi|220903295|ref|YP_002478607.1| histidyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867594|gb|ACL47929.1| histidyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 416

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 97/462 (20%), Positives = 185/462 (40%), Gaps = 64/462 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           +     +GFAD    +  I  R+ ++ R+I+  YGF  + TP++E+++   + +  + D 
Sbjct: 1   MSIARIKGFADMFPPDSDIFTRMENTARDIFGRYGFVELRTPIVEFTELFQRSIGEETDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K +++  D   + ++LR + TA + R   E+         R +  GP+FR E+   GR
Sbjct: 61  VQKEMYTFPDRKDRSLTLRPEATAGVMRAYIESGLANREAVSRLFTTGPMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG-----IKRNDYHIGINNRKILDGIL 179
            RQF Q + + +GS +  ADA++  M+   L+A+G     +K N         K  D +L
Sbjct: 121 MRQFHQINCECLGSHSPYADADLISMLLRFLDALGLEDLTLKVNSLGCSQCRPKFKDALL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +       L          D   +     +++L  +           G    ++    
Sbjct: 181 AYLETVDSAAL--------CADCARRVHTNPLRVLDCKQ---------PGCRAITDAAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +   +       +  L+ G     +  + L                       VRGL
Sbjct: 224 LLDYNCPECRAHFDTVLGLLNGEKLPFELDHRL-----------------------VRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY    +E +                +V GGGRYDGL+    G + P  GF+ G+ RL 
Sbjct: 261 DYYCRTTFEVV--------SGSIGAQAAVAGGGRYDGLIRSLGGPDAPGVGFAAGMERLA 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + + +  +   +           +  D+ S ++     Q LR AG+R EM    +  F +
Sbjct: 313 LMMGAGAAVPAD--------FYLVGMDAQSRAQGYALAQNLRAAGLRGEMNFSEAG-FKS 363

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            ++ A +      +I G  E ++  + +K+L  G++ +    
Sbjct: 364 LMRQAGKSGARYCLIMGPDEAAQNTVVVKNLESGEQTTVPQA 405


>gi|242051807|ref|XP_002455049.1| hypothetical protein SORBIDRAFT_03g003570 [Sorghum bicolor]
 gi|241927024|gb|EES00169.1| hypothetical protein SORBIDRAFT_03g003570 [Sorghum bicolor]
          Length = 486

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 107/454 (23%), Positives = 199/454 (43%), Gaps = 39/454 (8%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            PRG  D P +++R+R  + D  R +     F+ ++ P+LE      +   +E    + +
Sbjct: 72  PPRGTRDFPPEDMRLRTWLFDQFREVSRLMAFEEVDFPVLESEALFIRKAGEE--ITQQL 129

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +D  G+ + LR ++T  LAR V +   ++  P + + IG  +R E+   GR R+  Q
Sbjct: 130 YNFEDKGGRRVVLRPEITPSLARLVIKQGKSVSLPLKWFTIGQCWRYERMTRGRRREHYQ 189

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
            ++D  G     A+AE+   +    + +GI  +D  I +++RK+L  +L    +      
Sbjct: 190 WNMDIFGVPKVRAEAELLNAIVLLFQHLGITSSDVGIRVSSRKVLQAVLNMYSIPE---- 245

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
           +    V   +DKL K   + ++  L                L+SE +  ++  LS+    
Sbjct: 246 HLFTEVCVIVDKLGKMTREEIEKELIST------------GLSSEAVQGIIDVLSLKSLS 293

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E+        +  +   +L  +     + GY ++ I   +++VRGL YYTG V+EA 
Sbjct: 294 KLEEVV------GSDVEAVADLKKLFSFAEQYGY-ADWICFDASVVRGLAYYTGIVFEAF 346

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                     +     ++ GGGRYD L+S F  +++PA GF  G + ++  LK      +
Sbjct: 347 ---------DREGKLRAICGGGRYDRLLSTFGSEDIPACGFGFGDAVIVELLKEKGLLPD 397

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
             +++          D +           LR  G   ++     K      K+A+R N  
Sbjct: 398 MSRQIDD---IVFPLDEELEGPASSIAASLRKKGRSVDLV--EDKRLKWVFKHAERINAS 452

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
             I+ G  E  RGM+++K L+  +E   +    E
Sbjct: 453 RLILVGNSEWERGMVRVKILSTREEFEVKAGELE 486


>gi|302807263|ref|XP_002985344.1| hypothetical protein SELMODRAFT_122255 [Selaginella moellendorffii]
 gi|300146807|gb|EFJ13474.1| hypothetical protein SELMODRAFT_122255 [Selaginella moellendorffii]
          Length = 423

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 113/457 (24%), Positives = 203/457 (44%), Gaps = 38/457 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRG  D     + +RN +    + +   +GF+ ++ P++E      +   +E   
Sbjct: 1   IDLNPPRGTRDFAPPLMLLRNWLFSHFKEVSRLFGFEEVDFPVVESEALYIRKAGEE--I 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +++ +D  G+ + LR ++T  +AR + +   ++VFP R + IG  +R E+   GR R
Sbjct: 59  TQQLYNFEDKSGRRLCLRPEITPSIARLIIQKGKSLVFPLRWFTIGQCWRYERMTKGRRR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q ++D  G     A+AE+   +     ++G   ND  I ++NRK+L  +L++  +  
Sbjct: 119 EHYQWNMDIFGVPGVEAEAELLAAIVTLFTSMGFTANDVRIRVSNRKVLQAVLDRYSVPQ 178

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D    +   V   +DK+ K   + V   L                L+S  I+ +   + +
Sbjct: 179 D----KFNSVCVVVDKISKISKEEVDQQL------------MDLGLSSTAINGIRHAILL 222

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              K++ ++ EL+  +    + F E+  +  L +  GY+   + +   IVRGL YYTG V
Sbjct: 223 ---KNLDDIQELIGSS---SEAFLEMKKLFALSKAYGYDE-WLVVDLGIVRGLSYYTGIV 275

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EA               F ++ GGGRYD L+S F G ++PA GF  G + ++  L    
Sbjct: 276 FEAF---------DTQGKFRAICGGGRYDKLISNFGGPSIPACGFGFGDAVIVDLLNECN 326

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            S     E+  V       D +           LR+AG   +M L  +K       YA R
Sbjct: 327 LSPVLGHEVDDV---VFVLDEELRCHACNIVSRLRSAGRTVDMIL-ENKKLKWVFNYASR 382

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +    I+ G  E   G +++KDL   +E   ++   
Sbjct: 383 IDAKRMILLGIREWEEGNVRVKDLVTREETDVKVAEL 419


>gi|221133869|ref|ZP_03560174.1| histidyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 425

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 105/492 (21%), Positives = 186/492 (37%), Gaps = 70/492 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC  ++  I   + + +R+    YG+  I  P++E ++   + +
Sbjct: 1   MAK----TIQAIRGMNDCLPEQSGIWQYVENILRSTVAQYGYQEIRMPIVESTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   ++        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFDDRNGDSLTLRPEGTASAVRAGNQHGLIYNQQQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+  + A     +G    D      N    +   
Sbjct: 117 PQKGRYRQFHQFGVETYGLAGPDIDAEVISLSARLWRKLG--IADKVTLEINSLGSNAAR 174

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +      + L      L   D   +     +++L  +     +                
Sbjct: 175 AEYKTLLVEFLEAHKAQLD-EDSQRRMYTNPLRVLDSKNPEVQA---------ILSDAPK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +   L                     E        + E + + G      +++  +VRGL
Sbjct: 225 LQDHLD--------------------EASAAHFSQLCERLAQLG---ISYRVNPKLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G++  GGRYDGLV +  G+  PA GF++G+ RL+
Sbjct: 262 DYYNATVFEWVT--------DTLGAQGTICAGGRYDGLVEQLGGKAAPAVGFALGLERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFG 418
           + L  L  + +       V +       D++   Q   +MLR    +R +M  G   N  
Sbjct: 314 LMLTELGLTDDVPAA---VDVYVTALGEDAVLYAQTTAEMLRDTTDLRVQMHCGGG-NMK 369

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            QLK AD     +A++ G  E S   + IK L                      Q T+ +
Sbjct: 370 KQLKRADSAQARVALLIGGTEASDQQVTIKYL-----------------GGDADQTTVAL 412

Query: 479 SELVSTVKKILQ 490
           ++L ST+     
Sbjct: 413 AQLSSTLNAFFN 424


>gi|307690441|ref|ZP_07632887.1| histidyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 396

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 90/448 (20%), Positives = 170/448 (37%), Gaps = 54/448 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D           + + +R     YG   I TP  E+++   + + +  D 
Sbjct: 1   MLVQAPKGTKDMLPGIAYKWQYLEEKMRKTAAEYGAREIRTPAFEHTELFIRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ ++L+ + TA   R   E        P + Y   PVFR E    GR
Sbjct: 61  VQKEMYTFEDKGGRSVTLKPEGTASAVRAFIEGSLFNDAQPTKMYYFTPVFRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q  V+  GS   + D+E+  +    L  +G+   + +I          I      
Sbjct: 121 LREHHQFGVEVFGSQDASIDSELISLALRVLTELGVNNLELNINSIGCPNCRAIYNAALK 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
               K  + L          +F    +++L  +              + +     ++ +L
Sbjct: 181 EFLKKNYDDLCPT----CKSRFEKNPMRILDCKEEK---------CKIINASAPEILDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + +     L   +                            + KI+  IVRGL+YYT 
Sbjct: 228 DDECKSHFEALKAYLTA-----------------------MDIKYKINPRIVRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +                +V GGGRYD L+++  G ++PA GF +G+ RLI+ L+ 
Sbjct: 265 TVFEILNNN------------FTVCGGGRYDNLINQVGGPSMPAVGFGMGMERLILTLEE 312

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  I     + +        S  +       LR  G++ E+    +K+   Q+KYA
Sbjct: 313 SNI---EIPRTPYIDLYIGAMGDSSKIESLKLAYNLRKLGLKCEIDH-MNKSVKAQMKYA 368

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAK 452
           ++ +    +I G  E +   +++K ++ 
Sbjct: 369 NKIDASYTLILGDDELATKKVKLKRMSD 396


>gi|261493283|ref|ZP_05989810.1| histidine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496473|ref|ZP_05992853.1| histidine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307676|gb|EEY08999.1| histidine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311133|gb|EEY12309.1| histidine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 425

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 107/494 (21%), Positives = 194/494 (39%), Gaps = 74/494 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   +   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCSPSESPLWQWVEQKVRNVLASYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E         R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIERGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ ++ A   + +GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEVFGIANPEIDAELIILTARLWKELGI---DQHVSLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                    K  E    L   ++ ++     +++L  +     +                
Sbjct: 173 RANYRSALVKFLENHTALMNEEEKERLVKNPLRILDTKNEALQN---------VLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  D  +   +L  L+                            R +++  +VRGL
Sbjct: 224 LLDYLDDDSREHFTQLCALLDA-----------------------MGIRYEVNPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSALA------LGSQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLV 314

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLGSSK 415
           + ++ +    +  K    V +  +     +        + +R+     G+   M   S  
Sbjct: 315 LLVQEVNKEIDLPKT---VDVYIVFSGEGATLNAFQLAEQIRSELPHVGV---MTHCSGG 368

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            F  Q K AD+    +A++ G  E +   + IKDL  G E                 QIT
Sbjct: 369 KFQKQFKRADKVEAQIALVIGESEVAEKQVVIKDLRSGAE-----------------QIT 411

Query: 476 IPISELVSTVKKIL 489
           I  SEL++ + K  
Sbjct: 412 IAQSELIAELSKRF 425


>gi|194335545|ref|YP_002017339.1| histidyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|229558702|sp|B4SCE2|SYH_PELPB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|194308022|gb|ACF42722.1| histidyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 429

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 96/468 (20%), Positives = 183/468 (39%), Gaps = 51/468 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
            + +  +G  D   +E      +   +  I   YGF  I TP+ EY++   + +    D 
Sbjct: 2   PQYQAVKGTRDIFPEEAARWKYVEGVVHAIASLYGFSEIRTPVFEYTELFQRGIGSTTDI 61

Query: 66  PNKGVFSLQ-DDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPG 123
             K +FS   D  G+ ++LR ++TA + R   +N   +     + Y IG +FR E+   G
Sbjct: 62  VGKEMFSFLPDPKGRSLTLRPEMTAGVMRAALQNNLLSSAPVQKLYYIGELFRKERPQAG 121

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF Q   + +G S+  A AE+  +M     ++G++     I         G  E   
Sbjct: 122 RQRQFSQFGAELLGVSSPAAVAEVITLMMQLFASLGLRSLKLRINSL------GDTEDRL 175

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            + +            +D   K  L+   L + + +     +   GA         +  +
Sbjct: 176 RYREALQLYFTPFHELLDDASKERLEKNPLRILDTKNPALQELVAGA-------PRLYDY 228

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L                     +    +   +   + +        +I   +VRGL+YY 
Sbjct: 229 LK--------------------DASLQDFEKVLFYLEER---DIAYEIDYRLVRGLDYYC 265

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVAL 362
              +E            +     ++GGGGRYDGL        +VPA+GF++G+ RL++ +
Sbjct: 266 NTAFEVT--------SSELGAQDAIGGGGRYDGLARELGSSVDVPASGFAVGMERLLITM 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +          +   V +       D           LR AGI+ E+ L ++++   Q++
Sbjct: 318 EKQGLFATLAPQGPLVYVIV--QQQDLADNALQIVWRLRKAGIKTEVDL-AARSMKAQMR 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            A++     A+  GT E + G+  +K+L   ++++  ++        +
Sbjct: 375 EANKIKAAYALFIGTTEETTGLYALKNLETSEQITLTLEAVLELLREQ 422


>gi|326316281|ref|YP_004233953.1| histidyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373117|gb|ADX45386.1| histidyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 446

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 96/471 (20%), Positives = 183/471 (38%), Gaps = 61/471 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    E      + D +R +   + +  + TP+LE++    + + +  D  
Sbjct: 17  KLAAVKGMNDILPPESSRWEWLEDKVRGLMGQFAYRNVRTPILEHTALFVRGIGEVTDIV 76

Query: 67  NKGVFSLQDDDGQ-----WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            K ++S  D   +      +SLR + TA + R   E+      P R +  GP+FR EK  
Sbjct: 77  EKEMYSFHDRSDKYGDNDHLSLRPENTAGVVRAAIEHNMLYDGPKRLWYTGPMFRREKPQ 136

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-E 180
            GRFRQF Q   + +G +    DAE+ ++     +++G+      +    +        E
Sbjct: 137 RGRFRQFHQIGAEALGFAGPDVDAELILLADALWKSIGLTDVRLELNSLGQPAERARHRE 196

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++  H +         L   D   +     +++L  +                 E    +
Sbjct: 197 QLIAHFERHA-----DLLDEDGKRRLHTNPLRILDTKNPAMKP---------VVESAPRL 242

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +       L  ++                               I+  +VRGL+
Sbjct: 243 MDFLGEESLAHFDGLRAILDANGIA-----------------------YTINPRLVRGLD 279

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E I          +    G+V  GGRYD L+ +  G+  PA G++IG+ R++ 
Sbjct: 280 YYNLTVFEFIT--------DRLGSQGTVCAGGRYDDLIVQVGGKPAPAVGWAIGVERVLE 331

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS---KNF 417
            L+   ++    +      +  +  D+ +        + LR AG+  +M   S+    +F
Sbjct: 332 LLREQGAAIPEARP----DVYAVVPDASAAPVVLRTLRQLREAGLSVQMHAASAEGQGSF 387

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG--KELSREIKNNESW 466
            +Q K AD      A++ G  E +RG + +K L +   +++ R +    +W
Sbjct: 388 KSQFKRADASGAAFALVFGADELARGTVTVKPLREQGAEQVERRLDEIPAW 438


>gi|78355058|ref|YP_386507.1| histidyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123755038|sp|Q317R4|SYH_DESDG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|78217463|gb|ABB36812.1| histidyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 417

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 193/463 (41%), Gaps = 56/463 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M    K++     GFAD  + E  +   + ++ R+++ +YG+  + TP+LE ++   + +
Sbjct: 1   MSNVKKIK-----GFADLFSPESDVFTFMENTARDVFSSYGYGELRTPILERTELFCRSI 55

Query: 61  P-DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNE 118
             + D   K +++  D   + +++R + TA + R   E +  +     + +  GP+FR E
Sbjct: 56  GTETDVVQKEMYTFPDRKNRSLTMRPEATAGVMRAYIEGSLHSQEQVSKLFTFGPMFRYE 115

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR RQF Q + + +G     ADAE+ +M+   L+ +G+   +  I     +     
Sbjct: 116 RPQKGRMRQFHQINCECLGPQEPYADAEIILMLLMFLKRIGLSGLELQINSLGCRECR-- 173

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
             +        L          D   +     +++L  + +     + T  A +  +   
Sbjct: 174 -PQYHAALRAFLASLDTAELCEDCRRRMETNPLRVL--DCKVPRCKELTADAPVILDH-- 228

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                                      +       V+  ++ ++G        +  +VRG
Sbjct: 229 -------------------------TCDACSEHHSVVLGMLERAGVV---YTANPRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY    +E +          +     SV GGGRYDGLVS+  G +VP  GF+ G+ RL
Sbjct: 261 LDYYNRTTFEVVC--------GEIGAQSSVAGGGRYDGLVSQLGGPDVPGIGFACGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            +AL+          +           + D L +  M  + LR +G++ E+   ++++  
Sbjct: 313 ALALEQKAQREVPRPD-----FLVAVLEQDGLERGMMLAEALRESGLKGEVSF-AARSMK 366

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +Q++ A +RN    ++ G  E + G + +KD+  G + +  + 
Sbjct: 367 SQMRQAGKRNVRKVLLLGGSEIADGTVTVKDMDTGGQTTISLD 409


>gi|229846456|ref|ZP_04466564.1| histidyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810549|gb|EEP46267.1| histidyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 423

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 103/484 (21%), Positives = 190/484 (39%), Gaps = 74/484 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ ++     +A+G                   N
Sbjct: 116 PQKGRYRQFHQAGVEVFGIANPEIDAELIILTYRLWKALGIDQYVTLQLNSIGSLEARAN 175

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L G LE       D+  +RL+               +++L  +             
Sbjct: 176 YRSALVGFLENHQDLMSDEEKDRLV------------KNPLRILDTKN---------PEL 214

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +    ++ +L  +  +   +L  L+                            + +
Sbjct: 215 QKVLDNAPKLLDYLDDESREHFEQLCALLDA-----------------------VGIQYE 251

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V GGGRYDGLV +  G   P+ G
Sbjct: 252 INPKLVRGLDYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIG 303

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++ +     N+     V I  +     +        + +R+    +   
Sbjct: 304 FAMGLERLVLLVQEVN---PNVPAKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNT- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWR 467
           M   S  NF  Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + 
Sbjct: 360 MLHCSGGNFKKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYL 419

Query: 468 EARV 471
           + + 
Sbjct: 420 QTQF 423


>gi|76788408|ref|YP_330637.1| histidyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77405121|ref|ZP_00782220.1| histidyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77410833|ref|ZP_00787190.1| histidyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|123601069|sp|Q3JYL6|SYH_STRA1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|76563465|gb|ABA46049.1| histidyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77163051|gb|EAO74005.1| histidyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77176264|gb|EAO79034.1| histidyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 426

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 102/475 (21%), Positives = 184/475 (38%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      + + IRN+++ Y +D I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGESAKWQYVENVIRNLFKQYHYDEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPTKMYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR R+F Q  V+  GS+    D E   M     E +GIK    H+       +R+     
Sbjct: 121 GRLREFHQVGVECFGSNNPATDVETIAMGHHLFEDLGIKNVKLHLNSLGSPESRQAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        ++L++        D   +     +++L  +   D          L  E   
Sbjct: 181 LIDYLTPIREQLSK--------DSQRRLNENPLRVLDSKEPEDK---------LAVENAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L    +     +  ++                          +    I + +VRG
Sbjct: 224 SILDYLDESSQAHFDAVCHMLDAL-----------------------NIPYIIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I                ++  GGRYDGLVS F G   PA GF +G+ RL
Sbjct: 261 LDYYNHTIFEFITEIEDNE--------LTICAGGRYDGLVSYFGGPETPAFGFGLGLERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L         I+    + I  +  +++         Q +R  G + E      +   
Sbjct: 313 LLILGKQGI-PLPIENTIDLYIAVLGSEANL--AALDLAQSIRHQGFKVERDY-LGRKIK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD  N  + +  G+ E     + +K+    +E+    +N ++   + + Q
Sbjct: 369 AQFKSADTFNAKVIMTLGSSEVDSREVSLKNNQTRQEVKVSFENIKTGFSSVLKQ 423


>gi|145224391|ref|YP_001135069.1| histidyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|145216877|gb|ABP46281.1| histidyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 420

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 93/472 (19%), Positives = 183/472 (38%), Gaps = 68/472 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + P+G  D    +      +   +       G+  IE P+ E +    + + +  D  +
Sbjct: 5   FKAPKGVPDYFPPDSAEFVAVRSGLLTAARRAGYGDIELPIFEDTALFARGVGESTDVVS 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+R
Sbjct: 65  KEMYTFADRGERSVTLRPEGTAGVMRAVIEHGLDRGQLPVKLCYSGPFFRYERPQAGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  ++ +G      DAE+  +      ++G            D       R++L   
Sbjct: 125 QLQQVGIEAIGVDDPALDAEVMAVADAGFRSLGLDGFRLEITSLGDDSCRPQYRELLQEF 184

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L K+ L  + +   +L  LR +D         V+ +                        
Sbjct: 185 LFKLDLDEETRQRAQLNPLRVLDDKRPH----VREMTAN-------------------AP 221

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +M+  LS   ++    +   +                          S    I+  +VRG
Sbjct: 222 VMLDHLSDAAKEHFDTVLAHLDAL-----------------------SVPYVINPRMVRG 258

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E +                 +GGGGRYDGL+++  G+++   GF +G+ R 
Sbjct: 259 LDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGRDLSGIGFGLGVDRT 310

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++   +         V +  +   +D+  +  +    LR AG+R ++  G  ++  
Sbjct: 311 LLALRAEGKAAGETAR---VDVYAVPLGADAKVRLAVLAAQLRAAGVRVDVAYG-DRSLK 366

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             +K ADR    +A++ G  +   G + +K +A G+++     +  +   +R
Sbjct: 367 GAMKGADRSGASIALVAGDRDLEAGTVGVKSMATGEQVDVASDDVVAEVLSR 418


>gi|116620657|ref|YP_822813.1| histidyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|122255184|sp|Q028M4|SYH_SOLUE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116223819|gb|ABJ82528.1| histidyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 414

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 83/467 (17%), Positives = 163/467 (34%), Gaps = 57/467 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            +  +G  D       + NR+    R I+  Y +  I TP+ E +    + +  + D   
Sbjct: 2   IKAVKGTRDLLPPSTEVWNRVEQVARAIFRAYNYHEIRTPIFEETQLFSRGVGTETDIVT 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D DG  ++LR + TA + R   E+         + Y IGP+FR E+   GR+R
Sbjct: 62  KEMYTFEDRDGSSLTLRPENTASVIRAYIEHRLDQRPGVQKLYYIGPMFRRERPQKGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIGLH 185
           QF Q   + +GS +   DAE+  ++ + L+ VG+         + +       +EK+   
Sbjct: 122 QFFQIGAEAIGSESPVVDAEVIELVVEILKGVGLSGFKLLINSVGDHNCRPQYVEKLKAE 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             DK           D   +     +++L  +   D             + +  +V +L 
Sbjct: 182 LKDKAAGM-----CGDCQRRAETNPLRVLDCKVEADQP---------IIDALPSIVDYLC 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                    +   +                              ++   +VRGL+YY   
Sbjct: 228 EPCRAHFEAVKSYLTD-----------------------RGIEYEVRPRMVRGLDYYMRT 264

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +                SV GGGRYDGL      +     G    I    + +   
Sbjct: 265 TFEVV--------HGALGAQNSVLGGGRYDGLAESLGSRVHAP-GIGFSIGEDRLVMSVE 315

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                +  +     +        ++    +  +  R +G   E+           ++ A+
Sbjct: 316 GDQPASQLD-----LCIAPLGEAAVRHAAILARDFRRSGHSVELV---EGKLKRAMELAN 367

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +      +I G  E + G   +K++A G+++        +  +A   
Sbjct: 368 KFGARYTLIIGDNEIAAGRYALKNMATGEQVELTRDEIAARLDAASN 414


>gi|332016246|gb|EGI57159.1| Histidyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 571

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 110/490 (22%), Positives = 207/490 (42%), Gaps = 47/490 (9%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           KL  + P+G  D   +++ +R  +L+ I ++++ +G + I+TP+ E  D L     ++  
Sbjct: 126 KLILKTPKGTRDYNPEQMALRLGVLEKIISVFKRHGAETIDTPVFELKDVLTGKYGED-- 183

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +K ++ L+D  G+ ++LRYDLT P ARY+A +  + +             N     GR+
Sbjct: 184 -SKLIYDLKDQGGEILALRYDLTVPFARYLAMSKISSIKRYHIA-KVYRRDNPATTKGRY 241

Query: 126 RQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           R+F QCD D  G         E   ++ + LEA+ +    Y I +N+R +LDGI    G+
Sbjct: 242 REFYQCDFDIAGQYDLMLPDVECIRVVCEALEALNL--GPYLIKVNHRSLLDGIFAACGV 299

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                  +   +  ++DKLDK   + VK  + +              L     D +  ++
Sbjct: 300 PQS----KFRSICSSVDKLDKSPWEEVKKEMTDE-----------KGLDEHIADKVGKYV 344

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS--NRIKISSTIVRGLEYY 302
           S      +       K  +        L  +  L++  G     ++IK   ++ RGL+YY
Sbjct: 345 SQSGGVELIAELRKDKVLMKQSVAVQGLDSMELLLKYCGIYKILDKIKFDLSLARGLDYY 404

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YEAIL    +               G +D         NVP  G S+G+ R+   +
Sbjct: 405 TGVIYEAILCGDDVGVGSVAGGGRYDNLVGMFDSKNK-----NVPCVGVSVGVERIFSVM 459

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++  ++         + +       +   +       L  AG++AE     +     QL+
Sbjct: 460 EAKLANKGLKTRTTEIEVFVASAQKNLHEERMKILVDLWDAGVKAEQSYKKNAKLLAQLQ 519

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           + +    PLAII G GE ++G + ++ ++  +E                    +P + L+
Sbjct: 520 HCEENGIPLAIIIGEGELAKGEVTLRVVSTREET------------------RVPRNNLI 561

Query: 483 STVKKILQEN 492
             +++ L+ +
Sbjct: 562 DEIRRQLKTS 571


>gi|71032061|ref|XP_765672.1| histidyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68352629|gb|EAN33389.1| histidyl-tRNA synthetase, putative [Theileria parva]
          Length = 943

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 136/494 (27%), Positives = 224/494 (45%), Gaps = 50/494 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +LP+G  D    E+  R  ++ SI++I+  +G   IETP+ E  ++L     ++    K
Sbjct: 480 PKLPKGTMDFCPNEVLTRRVVISSIKDIFRQHGAVEIETPVFELKETLLGKYGED---QK 536

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRFR 126
            +F L+D  G+ +SLRYDLT P AR+VA N    +        G V+R ++     GR+R
Sbjct: 537 LIFDLKDQGGEQLSLRYDLTVPFARFVAMNKMEKIKRFHI---GKVYRRDEPQLARGRYR 593

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD+D  G   +       + +   +  + +K   + + +N+R ILD +L   G+  
Sbjct: 594 EFYQCDLDCAGEYPKMVPDAEIIFILVRVLRL-LKGGSFAVRVNHRAILDAVLLHCGV-- 650

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLL------LGEGRTDNSGDFTKGANLTSEQIDIM 240
             +++    +  +IDKLDK     VKL       L E   D   +F +     +E ++ +
Sbjct: 651 --EVSMHRTICSSIDKLDKLPWDKVKLEMTSEKGLPEYIADKIKEFIEINGTFTEVLEKL 708

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                  L K         K         +E+ ++   +   G   + +    ++ RGL+
Sbjct: 709 RDKNVTTLTKDSSVTSVKDKSDGNVL---DEMALLWSYLEAFGVKESEVMFDMSLARGLD 765

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++EA L              GSVG GGRYDGL+  F G+NVPA G S+GI RL  
Sbjct: 766 YYTGVIFEAFLKDE---------EVGSVGAGGRYDGLIGMFSGKNVPAVGMSVGIERLFR 816

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +    S      ++  V + ++        +      ML + GIRAE     + N   Q
Sbjct: 817 TMPKQNSG-----DLTDVFVCSVG-SPQMFFERMKLVGMLWSHGIRAEFLYNINANLRKQ 870

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           L  A  +   L ++ G  E     ++IK L+  +E              R+  +T+  SE
Sbjct: 871 LDAATDKGVSLMVLVGDSELETDTVKIKRLSYNEE-------------ERLEDLTVKRSE 917

Query: 481 LVSTVKKILQENKE 494
           LV+T+K +L +N +
Sbjct: 918 LVNTLKSLLSDNTK 931


>gi|256788893|ref|ZP_05527324.1| histidyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 420

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 94/474 (19%), Positives = 175/474 (36%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I     N G+  IETP  E  +   + + +  D  
Sbjct: 3   TFKAPKGTYDLLPPDSAKFLAVREAIAAPLRNSGYGYIETPGFENVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGR 124
            K ++  +   G  ++LR + TAP+ R V E             +  G  +R E+   GR
Sbjct: 63  TKEMYVFETKGGDRLALRPETTAPVLRAVLEANLHKAGNLPVKVWYSGSQYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++   +  A+G            D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQSYRALGLQDFRILLNSLGDQECRPVYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  +      +  LR +D         V+  L E                   
Sbjct: 183 DFLRGLDLDEETLRRAEINPLRVLDDKRP----DVQKQLTE------------------- 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+ EL+       +   +L                       V
Sbjct: 220 APLLRDYLCDACKAYHEEVRELITAAGVVFEDDPKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G ++P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPSLPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     +         +  +    ++          LR  G+ A+   G  K 
Sbjct: 309 RTVLALEAEGIELDIPSATS---VFAVPLGEEARRILFAKVTELRKNGVAADFSYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R      ++ G  + + G++Q+KD+  G++ +  +    +  E+R
Sbjct: 365 LKAAMKAANRSGARYTLVLGERDLAEGVVQLKDMESGEQTAIGVNEIVAELESR 418


>gi|302338418|ref|YP_003803624.1| histidyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635603|gb|ADK81030.1| histidyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 435

 Score =  240 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 130/470 (27%), Positives = 223/470 (47%), Gaps = 39/470 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           +   + +GF D    +   R  I+ ++  ++  YGF PI+TP+LEY +  LGK   + D 
Sbjct: 3   IEPRVLKGFRDFLPDQASRRIAIMHTLEQVFLGYGFVPIDTPVLEYREVLLGKGGGETD- 61

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K V++  D  G+ +++R+DLT P AR++A + + +  P + Y I  V+R E    GR+
Sbjct: 62  --KQVYAFTDQGGREVAMRFDLTVPFARFMASHINELSLPFKRYHIDKVWRGENTQKGRY 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F+QCD D VG  A +AD E+ +MM     A+G   ++    +N+R + +  L+ I   
Sbjct: 120 REFVQCDFDIVGIDALSADLEILLMMRSAFTALG--IDNVSFKVNHRGLFNRFLDTI--- 174

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +  +    +LR +DKL K G + V+  L                + S+  + ++ ++ 
Sbjct: 175 --EVASHSAAILRIVDKLAKIGEKEVREQLASE-------------IGSQTAEKVLDYIQ 219

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                 +  + +L +      +  N L  I   + +    ++   +  +I RGL+YYTG 
Sbjct: 220 AKGS-FLEAVEKLEELAGGSCEESNRLREIYRALEE-ASVADSFILDPSITRGLDYYTGI 277

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           VYE  L              GSV  GGRY+ L S +  Q +P  G SIG+ RL+ AL+ L
Sbjct: 278 VYETFLND--------LPQIGSVCSGGRYNNLASLYTKQQLPGVGSSIGLDRLVAALEEL 329

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +  +        +   + D      Y M    +R AG+  E+ L S K  G Q  +A+
Sbjct: 330 GKAGGSTSAPA---VAIFNIDESLSGYYHMLAGKVRKAGLSCEVQLQSQK-LGKQFAWAE 385

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQI 474
           +R   +A+I G  E++ G + +K+LA  +  +  +IK    W      + 
Sbjct: 386 KRGIRMALICGGDEKNAGKVSVKNLATRESRNMIDIKEAIDWCRMVATEE 435


>gi|219847238|ref|YP_002461671.1| histidyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541497|gb|ACL23235.1| histidyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 439

 Score =  240 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 134/468 (28%), Positives = 222/468 (47%), Gaps = 36/468 (7%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +  +G  D    ++ +R  I+ ++ +I E +GF+P++TP++EY+++L   L ++    K
Sbjct: 4   IQNVKGMRDHLPTDMMLRQYIVSTLTSISEAHGFEPLQTPIIEYAETLEGKLGED---EK 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ ++LRYD T PLAR  A+    +  P R Y  GP +R E+   GR+R+F
Sbjct: 61  LIYRFEDHGGRRLALRYDQTVPLARVTAQYAGQLTLPWRRYAYGPSYRGERPARGRYREF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q D+D VGS++  ADAE+  M+ + L A+G    D+   +N+R+I+ GI    GL  + 
Sbjct: 121 YQFDIDIVGSASPLADAEIVAMLCEALSALGF--PDFVTLLNHRQIIGGIARVSGLSEEA 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                    RAIDK DK G+ GV+  L +            A + +   D ++  + ID 
Sbjct: 179 AGGVY----RAIDKFDKIGVAGVRNELLK------------AGVDTGAADRILELVQIDG 222

Query: 249 --EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             ++ +  L + +            L  I + +   G  +++ +++  + RGL YYTG V
Sbjct: 223 SADEVLAALAQRLADDERAVAAIANLRSILDSLAAMGVPTDQYRVAPRLARGLSYYTGAV 282

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EAI               GS+ GGGRYD L+  F G+N+P  G + GI RL   +  L 
Sbjct: 283 FEAITPHWPE---------GSLLGGGRYDDLIGLFAGRNIPTVGLAFGIDRLHDVMLELN 333

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       +        D ++        LR AGI   + L    N G Q K ADR
Sbjct: 334 LGPRP---RTTAVAYVTLFSGDYVAASLALAAELRAAGIHTLIALEPG-NLGKQFKEADR 389

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           R    A++ G  E +R  + +KDL +G++ S             + + 
Sbjct: 390 RGVRFALVLGPDELARDEVVVKDLQRGEQRSLPRAAVAGLLAEALTEQ 437


>gi|145632616|ref|ZP_01788350.1| histidyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|229844543|ref|ZP_04464683.1| histidyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|144986811|gb|EDJ93363.1| histidyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|229812792|gb|EEP48481.1| histidyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 423

 Score =  240 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 105/484 (21%), Positives = 190/484 (39%), Gaps = 74/484 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ M+     +A+G                   N
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIMLTYRLWKALGIDQHVTLQLNSIGSLEARAN 175

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L G LE      +D+  ERL+               +++L  +             
Sbjct: 176 YRSALVGFLENHQDLMNDEEKERLV------------RNPLRILDTKN---------PEL 214

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +    ++ +L  +      +L  L+                            + +
Sbjct: 215 QKVLDNAPKLLDYLDDESRTHFEQLCSLLDA-----------------------VGIQYE 251

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V GGGRYDGLV +  G   P+ G
Sbjct: 252 INPKLVRGLDYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIG 303

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++ +     N+     V I  +     +        + +R+    +   
Sbjct: 304 FAMGLERLVLLVQEVN---PNVPAKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNT- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWR 467
           M   S  NF  Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + 
Sbjct: 360 MLHCSGGNFKKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYL 419

Query: 468 EARV 471
           + + 
Sbjct: 420 QTQF 423


>gi|302148840|pdb|3NET|A Chain A, Crystal Structure Of Histidyl-Trna Synthetase From Nostoc
           Sp. Pcc 7120
 gi|302148841|pdb|3NET|B Chain B, Crystal Structure Of Histidyl-Trna Synthetase From Nostoc
           Sp. Pcc 7120
          Length = 465

 Score =  240 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 139/489 (28%), Positives = 210/489 (42%), Gaps = 50/489 (10%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  K+    P GF +    E R+   +LD+IR +YE+YGF PIETP +E  + L     
Sbjct: 5   AKNDKINFSTPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKGN 64

Query: 62  DEDRPNKGVFSL-----------QDDDG----QWISLRYDLTAPLARYVAENFDTIVFPC 106
             D     ++ L           +D  G    +  +L++D T PLA Y+A + + + FP 
Sbjct: 65  QGDNI---IYGLEPILPPNRQAEKDKSGDTGSEARALKFDQTVPLAAYIARHLNDLTFPF 121

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
             Y+   VFR E+   GRFRQF QCD+D VG    +   +       T     +   D+ 
Sbjct: 122 ARYQXDVVFRGERAKDGRFRQFRQCDIDVVGREKLSLLYDAQXPAIITEIFEAVNIGDFV 181

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I INNRK+L G  + + +       +    +  ID L+K G   VKL L +         
Sbjct: 182 IRINNRKVLTGFFQSLNISE----TQIKSCISIIDNLEKIGEAKVKLELEKE-------- 229

Query: 227 TKGANLTSEQIDIMVSFLSIDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRK 281
                +  EQ   ++ F+ ID         +  L + +  +     G +EL  +   VR 
Sbjct: 230 ----GINPEQTQKIIDFVKIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVRN 285

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            G    R  I   I RGL YYTG VYE  L              GS+  GGRY+ LV  F
Sbjct: 286 LGVPDKRFCIDLAIARGLNYYTGTVYETTLIG--------HEALGSICSGGRYEELVGTF 337

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
            G+  P  G SIG++RLI  L  L++   N     P  +  ++   +    Y   +Q LR
Sbjct: 338 IGEKXPGVGISIGLTRLISRL--LKAGILNTLPPTPAQVVVVNXQDELXPTYLKVSQQLR 395

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AG+         +  G Q + AD++     +I G  E +     +KDL  G+++   + 
Sbjct: 396 QAGLNVITNF-EKRQLGKQFQAADKQGIRFCVIIGADEAAAQKSSLKDLQSGEQVEVALA 454

Query: 462 NNESWREAR 470
           +     + R
Sbjct: 455 DLAEEIKRR 463


>gi|189424820|ref|YP_001951997.1| histidyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|259511949|sp|B3EB83|SYH_GEOLS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189421079|gb|ACD95477.1| histidyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 419

 Score =  240 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 91/472 (19%), Positives = 179/472 (37%), Gaps = 56/472 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +     +GF D    E  +   I  + R ++  YGF+ I  P++E ++   + + D  D 
Sbjct: 1   MSITGIKGFNDLLPAESGLWQFIEQTARQVFARYGFNEIRVPIVEKTELFCRSIGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D  G  ++LR + TA + R + E+    +    + Y +GP+FR+E+   GR
Sbjct: 61  VEKEMYTFMDKGGSSLTLRPEGTASVMRALIEHKLYALDSINKLYYMGPMFRHERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
           +RQF Q   +  G++    DA++ +M++   +  G+         +          + + 
Sbjct: 121 YRQFHQIGAEVTGAADPLIDAQVLLMVSRLFQEFGLTEPRLQINSLGCPACRPAYRQALV 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               ++           D   + G   ++ L  + +     + T+GA         MV  
Sbjct: 181 AFLAER-----QEALCEDCRRRQGTNPLRAL--DCKVPGCIEATQGA-------PAMVEH 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  + ++    +   +                               ++  +VRGL+YYT
Sbjct: 227 LCNECDQHFSMVQNYLTAAEV-----------------------PFSLNPRMVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                +V  GGRYDGLV +  G  VP  GF++G+ R+ + L 
Sbjct: 264 RTTFELVT--------GLLGAQSAVAAGGRYDGLVEQLGGPAVPGIGFALGVERVALLL- 314

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                  + ++   + I  M     + +        L+  G   E      K+  +Q++ 
Sbjct: 315 ----GDRSFEKTPDLFIAVMG--DAARTAGFRLMAALQDQGFWVETD-CEGKSLKSQMRR 367

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           AD+     +I+ G  E   G   +K +A G +    ++             T
Sbjct: 368 ADKLKSRYSIVLGDTELVAGSGTLKRMADGNQQPVHLEAATIAAAITGGGQT 419


>gi|68248972|ref|YP_248084.1| histidyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336616|sp|Q4QNH3|SYH_HAEI8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|68057171|gb|AAX87424.1| histidyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 423

 Score =  240 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 101/475 (21%), Positives = 190/475 (40%), Gaps = 56/475 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ M+     +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIMLTYRLWKALGI---DQHVTLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E    L + ++ ++     +++L  +                 +    
Sbjct: 173 RANYRSALVGFLENHQDLMSDEEKERLVRNPLRILDTKN---------PELQKVLDNAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +      +L  L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDDESRAHFEQLCSLLDA-----------------------VGIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G   P+ GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     N+     V I  +     +        + +R+    +   M   S  NF
Sbjct: 313 LLVQEVN---PNVPTKSAVDIYVVYQGEGATLVAFELAEKVRSELPHLNT-MLHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARV 471
             Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + + + 
Sbjct: 369 KKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYLQTQF 423


>gi|158520686|ref|YP_001528556.1| histidyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|229558655|sp|A8ZUR6|SYH_DESOH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|158509512|gb|ABW66479.1| histidyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 423

 Score =  240 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 92/457 (20%), Positives = 167/457 (36%), Gaps = 51/457 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +L +GF D    E     RI       +  +GF  I  P++E ++   + + +  D   
Sbjct: 2   LQLIKGFKDILPGEADRWRRIETLAAVTFGAFGFSEIRPPVMERTELFKRSIGEDTDIVE 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRI-GPVFRNEKHGPGRFR 126
           K +++ +D  G  ++LR + TA + R   ++      P       GP+FR E+   GR+R
Sbjct: 62  KEMYTFEDRGGDLVTLRPEATASVVRAYIQHKLYADTPVAKLYTIGPMFRRERPQKGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + +  G +A   DA++  M+     A+G+K    HI            ++  L  
Sbjct: 122 QFHQINAEAFGVAAPYMDAQLIFMLMILFSALGLKDTRVHINSLGCAQCRPAFKQRLLSF 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +     L      D   +     +++L  +                S +   +  FL  
Sbjct: 182 LEGRKADL----CEDCTRRIDRNPLRVLDCK---------VDRCRHVSAEAPQITDFLCP 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                  E+  L+     G      L                       VRGL+YYT   
Sbjct: 229 GCAAHFDEVTGLLTDLGVGFDIDKRL-----------------------VRGLDYYTRTT 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E         +  +     ++ GGGRYD LV    G + PA GF++     +  L  L 
Sbjct: 266 FEV--------QTDRLGAQSAIAGGGRYDDLVKLLGGPDQPAVGFAV----GLERLVELV 313

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    + ++  + +        +  +   +   L   G   EM L   +   +Q+K AD+
Sbjct: 314 AMEETVSDVAHLRLFIAALGERARRRAFGWMCELNRRGFDVEMSLEE-RGLKSQMKTADK 372

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            N    +I G  E   G L ++++    +    + + 
Sbjct: 373 WNASHVLIVGDAEMETGSLILRNMKTKAQQEIPLGDV 409


>gi|119356203|ref|YP_910847.1| histidyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|166980044|sp|A1BDE6|SYH_CHLPD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|119353552|gb|ABL64423.1| histidyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 429

 Score =  240 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 96/466 (20%), Positives = 176/466 (37%), Gaps = 59/466 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
           + ++ +G  D    EI   + + D +  +   YG+  I TP+ EY++   + +    D  
Sbjct: 3   QYQVVKGARDIFPDEIVRWHYVEDVVHRLASLYGYSEIRTPVFEYTELFQRSIGTTTDIV 62

Query: 67  NKGVFSLQ-DDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            K +FS   D  G+ I+LR ++TA + R V + N  +     + + +  +FR E+   GR
Sbjct: 63  GKEMFSFLPDPQGRSITLRPEMTAGVMRAVLQKNLLSTAPIHKLFYLSELFRKERPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILE 180
            RQF Q   + +G S+  A AE+   M    E +GI+     I      ++R     IL 
Sbjct: 123 QRQFSQFGAELLGVSSPAAVAEVITFMMQVFETLGIRGLKLRINTLGDSSDRARYREILR 182

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  D+L          D   +   +   L + + +  +  +  +GA    + +   
Sbjct: 183 AYLAPFYDRL----------DLASRERFEKNPLRILDSKNPDMQEIIEGAPTLHDSLS-- 230

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                                     +   +   +   +      S    I   +VRGL+
Sbjct: 231 -------------------------HEALEDFEKVRFYLDSR---SIAYDIDYRLVRGLD 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLI 359
           YY    +E                  ++GGGGRYDGL        +VPA+GF+ G+ R++
Sbjct: 263 YYCHTAFEVTSPE--------LGAQDAIGGGGRYDGLAKELGSSGDVPASGFAAGMERVL 314

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + ++                +  +      L         LR  GI  E+ L + ++   
Sbjct: 315 ITMEKQGLFAALRPSGP--KVYVVAQQHALLDHALQVAYRLRREGISTEVDL-AGRSMKA 371

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           Q++ A+R     A+  G  E   G   +K+L    + ++ I+    
Sbjct: 372 QMRDANRMRACFALFIGEDEVVSGSYALKNLVTADQTAQSIETIIE 417


>gi|228475224|ref|ZP_04059950.1| histidine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270835|gb|EEK12237.1| histidine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 425

 Score =  240 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 96/466 (20%), Positives = 183/466 (39%), Gaps = 50/466 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            ++PRG  D   +E      I + +  + + Y +  I TP+ E +D   + + D  D   
Sbjct: 2   IKIPRGTQDILPQESAKWRYIENKLDELMKLYNYKEIRTPIFESTDLFARGVGDSTDVVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + I+LR + TA + R   EN        P + Y  GP+FR E+   GR+
Sbjct: 62  KEMYTFKDKGDRSITLRPEGTAAVVRSYIENKMQGEPNQPIKLYYNGPMFRYERKQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGL 184
           RQF Q  V+ +G+   + DAE+  M+    E+ G+K     I  I ++       E +  
Sbjct: 122 RQFNQFGVEAIGAENPSIDAEVLAMVMHIYESFGLKHLKLVINSIGDQASRKEYNEALMK 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           H +      +I     D   +     +++L  +   D             +    +  +L
Sbjct: 182 HFE-----PVIDTFCNDCQSRLHTNPMRILDCKIDRDKE---------AVKHAPRITDYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + +     +   +                                   +VRGL+YYT 
Sbjct: 228 NDESKAYYEAVKHHLD-----------------------QLDINYVEDPNLVRGLDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E ++  P            ++ GGGRY+GL+    G      GF++ I RL++AL+ 
Sbjct: 265 TAFELMMDNPN-----YDGAITTLCGGGRYNGLLELLDGPKQTGIGFALSIERLLLALEE 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +   N  ++     +  +     +          LR  G++A+     ++    Q+K A
Sbjct: 320 EDIELNVDEDFD---LFVVTMGKKAEQYSVKLLNDLRKHGVKADKDY-LNRKIKGQMKQA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           DR N    I+ G  E     + +K+++ G+  + ++    S+    
Sbjct: 376 DRLNAKYTIVIGDQELDNNKIDVKEMSTGETKTIQLDEVVSFFNKE 421


>gi|288560504|ref|YP_003423990.1| histidyl-tRNA synthetase HisS [Methanobrevibacter ruminantium M1]
 gi|288543214|gb|ADC47098.1| histidyl-tRNA synthetase HisS [Methanobrevibacter ruminantium M1]
          Length = 433

 Score =  240 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 113/464 (24%), Positives = 197/464 (42%), Gaps = 33/464 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E PRG  D   +E+R R    D++RN++ENYGF  ++TPL E          +E   
Sbjct: 1   MEFERPRGTRDFLFEEMRERKMAEDTLRNVFENYGFGEVQTPLFEDLKLFTTKSGEEIVD 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +++ +D   + ++LR ++TAP+AR           P + Y  G  FR E+   GRFR
Sbjct: 61  --QLYNFKDKGDRDLALRPEITAPIARLYLNELQKTSKPIKIYYYGSCFRYERPQKGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   + +G+     +AE+  M  + +E +GI   ++++         GI+  +  H 
Sbjct: 119 QFWQFGCELIGAKTPEGEAEVIAMCNNAIEELGITTAEFNV------NHLGIIRGLFAHF 172

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D     +  ++  IDK D          L +          K     +E +  ++  +  
Sbjct: 173 DIDTATQREIMVVIDKGD--------KDLLKDSLVGENPIIKDKPELNEVLFKLMDMVGD 224

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                + ++ ELV      ++   E   + + +          K++  + RGL+YYTG V
Sbjct: 225 SS--IIKDIEELVAPYEETQEALEEFKELVKTLESFQVF--NYKLNLGVARGLDYYTGIV 280

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E  +                V GGG Y  LV  F G++V +TGF++G  RL+ A++ L 
Sbjct: 281 FEVYVEG--------LGAQKQVCGGGTY-NLVKLFGGEDVVSTGFALGFDRLMNAIEELN 331

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                ++    V          +        Q LR A I  E+ L S K F   L YA++
Sbjct: 332 G---KVELEPIVNTYVAAISDSTRHNAFSIAQDLRKANIPTEVDL-SRKKFKKILAYANK 387

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +    ++ G  +   G + IKD+  G++    I     + + +
Sbjct: 388 IDVKYTVLVGERDLEEGKVTIKDMLTGEQELVAIDEVVDYIKGK 431


>gi|307250431|ref|ZP_07532378.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306857560|gb|EFM89669.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 423

 Score =  240 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 104/494 (21%), Positives = 192/494 (38%), Gaps = 76/494 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I + +RN+   YG+  +  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDCSPTESPLWQWIENKVRNVLAGYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E         R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIERGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+ ++ A   + +GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEVFGIPNPEIDAELIILTARLWKELGI---DQHVSLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                    K  E    L + ++ ++     +++L  + +                    
Sbjct: 173 RANYRSALVKFLENHTALMSDEEKERLVKNPLRILDTKNQA---------LQEVLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L     +    L  L+                              +++  +VRGL
Sbjct: 224 LLDYLDDGSREHFAHLCHLLDA-----------------------MGITYEVNPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGSQGTVCGGGRYDGLVEQLGGHATQGIGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLGSSK 415
           + ++ +    N  K    V +  +     +        + +R+     G+   M   S  
Sbjct: 313 LLVQEVNKEINLPKA---VDVYVVYSGEGATLNAFQMAERIRSELPQLGV---MTHCSGG 366

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           NF  Q K AD+    +A++ G  E  +  + +KDL  G E                 Q+T
Sbjct: 367 NFKKQFKRADKVEAQIALVIGESEVEQQTVVLKDLQSGAE-----------------QVT 409

Query: 476 IPISELVSTVKKIL 489
           I  ++L++ + K  
Sbjct: 410 IAQADLIAELTKRF 423


>gi|288817800|ref|YP_003432147.1| histidyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787199|dbj|BAI68946.1| histidyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751398|gb|ADO44881.1| histidyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 408

 Score =  240 bits (611), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 104/461 (22%), Positives = 184/461 (39%), Gaps = 59/461 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RGF D   +E++    + D++R++ + Y F+ I  P++EY +   + + +  D   
Sbjct: 4   FQSVRGFHDIFGQELKKFRYVSDTVRSLLKLYNFEEIILPVVEYLEVFQRSIGEVTDIVQ 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +F  QD  G+W++LR + TA   R   +N    +    + +  GP+FR E+   GR+R
Sbjct: 64  KEMFVFQDRKGRWLALRPEGTAGAVRAYIQNRLYALKPYVKLFYEGPMFRYERPQAGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   +  G+     DA+M  M+   L  +GI        I  R       + +  + 
Sbjct: 124 QFHQIGAEVFGTLDPQVDAQMIEMVHTILTKLGISATIEINSIGCRVCRPSYKKALSDYL 183

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +D +     V      LD+     +++L  +          +      +Q   MV +L  
Sbjct: 184 EDVVGHLCDVC-----LDRKDKNPLRVLDCK---------VETCKEAVKQAPKMVDYLCQ 229

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +       L   +                          S   + +  +VRGL+YYT  V
Sbjct: 230 ECATHYETLKSYLD-----------------------MLSIPYRENHHLVRGLDYYTKTV 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EA+     +          ++  GGRYD LV    G   PA GF++GI R+ + +K L 
Sbjct: 267 FEAVSDELGI----------TIIAGGRYDYLVEEMGGPPTPAIGFAVGIERISMLVKDL- 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                 +E    ++       D+L       + LR  G R E     + N   QL+ A++
Sbjct: 316 -----PQEEPLYMVIPFG---DTLDYAFEVIKKLRDMGKRVETSYKKA-NLKKQLELANK 366

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
                 ++ G  E+ +  + IK++  G + S         R
Sbjct: 367 LKADYVVLIGEDEKRQNTITIKNMHTGMQESISFLELAHER 407


>gi|327400952|ref|YP_004341791.1| ATP phosphoribosyltransferase regulatory subunit [Archaeoglobus
           veneficus SNP6]
 gi|327316460|gb|AEA47076.1| ATP phosphoribosyltransferase regulatory subunit [Archaeoglobus
           veneficus SNP6]
          Length = 416

 Score =  240 bits (611), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 95/466 (20%), Positives = 183/466 (39%), Gaps = 52/466 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E PRG  D    E+  R  I   +R I E+YG+  I TP  E+ +       +    
Sbjct: 1   MKIERPRGTRDFLPDEMEKRRAIEAVMRRIAESYGYREIATPTFEHLELFTIKSGEGIV- 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +++ +D  G+ ++LR +LTAP+ R        +  P R Y     FR E+   GR+R
Sbjct: 60  -EELYAFKDKGGRDLALRPELTAPVMRLFVNECSVMPRPLRFYYFANCFRYERPQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +GSS+  +DAE+  +    ++ + +   D+ + I +  +L  +L+ I    
Sbjct: 119 EFWQFGVELIGSSSHLSDAEVIALAYRIMDELNL---DFELHIGHVGLLRHLLKDIEEDR 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K+                       L+ +   +    + +  N   E  + + + + +
Sbjct: 176 ASKIM---------------------RLIDKKDVEGLSSYLREINAPEELAEKIYALIEL 214

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              + +      +      +   + +  + +++           I   I RGL+YYTG V
Sbjct: 215 TGSRDVLVEASRL----IPDFDMSHMEKLCDVLDSMN---VNYVIDLGIARGLDYYTGVV 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EA         K        + GGG Y  L   F G++VP+TGF++G  R+    +   
Sbjct: 268 FEAY-------AKHGLGAQKQICGGGSY-RLTHLFGGEDVPSTGFALGFDRIAEICE--- 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  +   +++  +  + +         + LR  G R    +   +N   Q  YA+ 
Sbjct: 317 ---ITPPQKPVIVVVNVGFEGE----AFRIAEELRKQGFRVVTDVME-RNIRKQFSYAND 368

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            N   A++ G  E   G   +K++  G+      +           
Sbjct: 369 INASFAVVVGKREIESGRYTLKNMVTGEHYELSFEELVKHLSREAQ 414


>gi|319896698|ref|YP_004134891.1| histidyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|301169071|emb|CBW28668.1| histidyl tRNA synthetase [Haemophilus influenzae 10810]
 gi|317432200|emb|CBY80552.1| histidyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 423

 Score =  240 bits (611), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 103/475 (21%), Positives = 191/475 (40%), Gaps = 56/475 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ M+     +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIMLTYRLWKALGI---DQHVTLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E    L + ++ ++     +++L  +                 +    
Sbjct: 173 RANYRSALVGFLENHQDLMSDEEKERLVRNPLRILDTKN---------PELQKVLDNAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +      +L  L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDDESRAHFEQLCSLLDA-----------------------VGIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G   P+ GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     NI     V I  +     +        + +R+    +   M   SS NF
Sbjct: 313 LLVQEVN---PNIPAKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNT-MLHCSSGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARV 471
             Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + + + 
Sbjct: 369 KKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYLQTQF 423


>gi|260582539|ref|ZP_05850329.1| histidyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094350|gb|EEW78248.1| histidyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 423

 Score =  240 bits (611), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 100/475 (21%), Positives = 190/475 (40%), Gaps = 56/475 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q   +  G +    DAE+ M+     +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQVGAEVFGIANPEIDAELIMLTYRLWKALGI---DQHVTLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E    L + ++ ++     +++L  +                 +    
Sbjct: 173 RANYRSALVGFLENHQDLMSDEEKERLVRNPLRILDTKN---------PELQKVLDNAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +  +   +L  L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDDESREHFEQLCSLLDA-----------------------VDIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G   P+ GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     N+     V I  +     +        + +R+    +   M   S  NF
Sbjct: 313 LLVQEVN---PNVPVKSAVDIYVVYQGEGTTLAAFELAEKVRSELPHLNT-MLHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARV 471
             Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + + + 
Sbjct: 369 KKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGADQQTLDLVNVIDYIQTQF 423


>gi|16272317|ref|NP_438530.1| histidyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580568|ref|ZP_05848396.1| histidyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174513|sp|P43823|SYH_HAEIN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|1573338|gb|AAC22027.1| histidyl-tRNA synthetase (hisS) [Haemophilus influenzae Rd KW20]
 gi|260092910|gb|EEW76845.1| histidyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 423

 Score =  240 bits (611), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 102/475 (21%), Positives = 191/475 (40%), Gaps = 56/475 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ M+     +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIMLTYRLWKALGI---DQHVTLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E    L + ++ ++     +++L  +                 +    
Sbjct: 173 RANYRSALVGFLENHQDLMSDEEKERLVRNPLRILDTKN---------PELQKVLDNAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +      +L  L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDDESRTHFEQLCSLLDA-----------------------VGIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G   P+ GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     N+     V I  +     +        + +R+    +   M   SS NF
Sbjct: 313 LLVQEVN---PNVPAKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNT-MLHCSSGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARV 471
             Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + + + 
Sbjct: 369 KKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYLQTQF 423


>gi|108756931|ref|YP_631910.1| histidyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108460811|gb|ABF85996.1| histidyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 425

 Score =  240 bits (611), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 98/464 (21%), Positives = 170/464 (36%), Gaps = 58/464 (12%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPNKGVF 71
           +G  D    EI I   +    R ++  +G+  I TP++E +    + +  + D   K ++
Sbjct: 9   KGMNDLLPGEIEIWQHVEAQARELFGRFGYGEIRTPMVEDTALFVRSVGEETDIVGKEMY 68

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFRQFIQ 130
           +  D   + +SLR + TAP AR   E+      P  R +  GP+FR E+   GR+RQF Q
Sbjct: 69  TFNDKADRSLSLRPEGTAPAARAYIEHSIANQEPLTRWFYAGPMFRYERMKTGRYRQFYQ 128

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKIGLHG 186
              +  G+     D EM  M+   LE +G+K      +       R      L +     
Sbjct: 129 IGAEAYGAKEGAQDVEMMDMVVQFLERLGLKDITLNINSLGDEVCRPTYHAKLVEYLQAH 188

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            + L          D   +     +++L  +                +     ++  L  
Sbjct: 189 REAL--------CGDCQKRMEKNPLRVLDCKNEK---------CQAIAAAGPNVLESLCE 231

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                  ++   +                               ++  +VRGL+YYT  V
Sbjct: 232 PCRAHFDDVQRKLTALGVRH-----------------------VVNPRMVRGLDYYTRTV 268

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I   P +              GGRYD LV    G + PA GF+ G+ RL++ LK   
Sbjct: 269 FEFIASHPALGTASTVGA------GGRYDKLVKSLGGPDAPAVGFACGLDRLVLLLKESG 322

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  +     +     D+ S     +    LR  G+R E       +  +Q+K AD+
Sbjct: 323 QQFTVRPD-----VFVAVADAGSHDAALVLASRLRREGLRVEFD-TRGGSLKSQMKRADK 376

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +    ++ G  ER+ G  ++K +A G+ +   +         R
Sbjct: 377 SSAEFTLVLGEAERTSGQAKLKPMAGGEPIPVALDEVARVVRER 420


>gi|289615226|emb|CBI57993.1| unnamed protein product [Sordaria macrospora]
          Length = 482

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 121/503 (24%), Positives = 212/503 (42%), Gaps = 58/503 (11%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
           + L+ + P+G  D    ++ +R ++  ++ ++++ +G  P++TP+ E  + L     ++ 
Sbjct: 19  SNLQIKTPKGTRDWHGPDMLLREQLFQTVSDVFKRHGGTPLDTPVFELREILAGKYGED- 77

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GP 122
             +K ++ LQD  G+  SLRYDLT P AR++A    T     + Y I  V+R ++     
Sbjct: 78  --SKLIYDLQDQGGELCSLRYDLTVPFARWLAM---TSTQQVKRYHIAKVYRRDQPAIAR 132

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F QCD D  G           + +   +      +    I +N+RKILDG+    
Sbjct: 133 GRMREFHQCDFDIAGVYDPMIPDAEILRIIVEVFD--ALKLGITIKLNHRKILDGLFAVA 190

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+  +    +   +  A+DKLDK     VK  + E              L  E  D +  
Sbjct: 191 GVPAE----KIRTISSAVDKLDKMPWADVKKEMVEE-----------KGLPEEVADKIGV 235

Query: 243 FLSIDLEKS----MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++      +      +    +      + G +++ +++  +      ++++    ++ RG
Sbjct: 236 YVQNAGNITDIINYIKADAHLPANDDIKAGIHDMELLAAYLEAL-EVTDKVSFDLSLARG 294

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPV---------VFGSVGGGGRYDGLVSRFKGQNVPAT 349
           L+YYTG ++E I     + E  K             GS+  GGRYD LV  +  + +P  
Sbjct: 295 LDYYTGLIFEVINKPEPVAEGDKKKKSKKDDPASQVGSIAAGGRYDNLVGMYGKKQIPCV 354

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYTQMLRTAGIR 406
           G S GI R+   LK+   +    K    V +       D    L +     + L  AGIR
Sbjct: 355 GISFGIDRIYTILKARGENDIK-KREVDVFVMAFGGGKDFDGLLIERMKIARQLWNAGIR 413

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE    +      Q K A+    PL +I G  E   G +++K L +G             
Sbjct: 414 AEYMPKAKPKLQAQFKAAE--GTPLGVILGEDELKAGQVRLKKLDQG------------- 458

Query: 467 REARVAQITIPISELVSTVKKIL 489
           +  +     +PI  L   VKK+L
Sbjct: 459 QGQKDEGNLVPIDSLAEEVKKLL 481


>gi|145638722|ref|ZP_01794331.1| histidyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145272317|gb|EDK12225.1| histidyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309750212|gb|ADO80196.1| Histidyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 423

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 106/484 (21%), Positives = 190/484 (39%), Gaps = 74/484 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ M+     +A+G                   N
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIMLTYRLWKALGIDQHVTLQLNSIGSLEARAN 175

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L G LE      +D+  ERL+               +++L  +             
Sbjct: 176 YRSALVGFLENHQDLMNDEEKERLV------------RNPLRILDTKN---------PEL 214

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +    ++ +L  +      +L  L+                            + +
Sbjct: 215 QKVLDNAPKLLDYLDDESRAHFEQLCSLLDA-----------------------VGIQYE 251

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V GGGRYDGLV +  G   P+ G
Sbjct: 252 INPKLVRGLDYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIG 303

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++ +     NI     V I  +     +        + +R+    +   
Sbjct: 304 FAMGLERLVLLVQEVN---PNIPVKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNT- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWR 467
           M   S  NF  Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + 
Sbjct: 360 MLHCSGGNFKKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYL 419

Query: 468 EARV 471
           + + 
Sbjct: 420 QTQF 423


>gi|145631822|ref|ZP_01787581.1| histidyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144982541|gb|EDJ90095.1| histidyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 423

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 102/475 (21%), Positives = 191/475 (40%), Gaps = 56/475 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ M+     +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIMLTYRLWKALGI---DQHVTLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E    L + ++ ++     +++L  +                 +    
Sbjct: 173 RANYRSALVGFLENHQDLMSDEEKERLVRNPLRILDTKN---------PELQKVLDHAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +      +L  L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDDESRAHFEQLCSLLDA-----------------------VGIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G   P+ GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     N+     V I  +     +        + +R+    +   M   SS NF
Sbjct: 313 LLVQEVN---PNVPAKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNT-MLHCSSGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARV 471
             Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + + + 
Sbjct: 369 KKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYLQTQF 423


>gi|21231254|ref|NP_637171.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|32130118|sp|Q8P9P5|SYH_XANCP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|21112904|gb|AAM41095.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
          Length = 477

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 145/512 (28%), Positives = 232/512 (45%), Gaps = 71/512 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQDDDGQ------------------WISLRYDLTAPLARYVAENFDTIVFPCR 107
               V+      G                    ++LR+DLT PLARYVAE+   + FP R
Sbjct: 62  ---QVY-FVQSTGALANAAAAADEGAESGGLPELALRFDLTVPLARYVAEHEHELSFPFR 117

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ +
Sbjct: 118 RYQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKV 177

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +NNRK+L G  E +G+   +    +L VLR +DK+DK G + V+  L            
Sbjct: 178 QLNNRKLLRGFFESLGVAEGE---LQLAVLREVDKIDKRGAEYVRDTL----------AG 224

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRK 281
           +G  + + Q+D +++F+++        L +L      V  ++   +G  EL  + ELV+ 
Sbjct: 225 EGFGIAAAQVDKILAFVAVRSNGHADALAQLQALETSVGASVTLGEGIAELREVLELVKA 284

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            G       ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S +
Sbjct: 285 LGVPETAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYENLASHY 336

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
               +P  G SIG++RL   L+         +     ++  M  D   L       + LR
Sbjct: 337 TKSKLPGVGISIGLTRLFWQLREAGLIAGIAESSVHAMVALM--DESRLDDALDIARRLR 394

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             GI  E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL   ++      
Sbjct: 395 IGGINTEVQM-EPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ------ 446

Query: 462 NNESWREARVAQITIPISELVSTVKKILQENK 493
                      Q  +   EL ST++  L++ K
Sbjct: 447 -----------QFDVARDELASTLQVELEQAK 467


>gi|148827508|ref|YP_001292261.1| histidyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166227972|sp|A5UGH2|SYH_HAEIG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|148718750|gb|ABQ99877.1| hypothetical protein CGSHiGG_04655 [Haemophilus influenzae PittGG]
          Length = 423

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 101/475 (21%), Positives = 191/475 (40%), Gaps = 56/475 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ ++     +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEVFGIANPEIDAELIILTYRLWKALGI---DQHVTLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E    L + ++ D+     +++L  +                 +    
Sbjct: 173 RANYRSALVGFLENHQDLMSDEEKDRLVKNPLRILDTKN---------PELQKVLDNAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +  +   +L  L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDDESREHFEQLCSLLDA-----------------------VDIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G   P+ GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     N+     V I  +     +        + +R+    +   M   S  NF
Sbjct: 313 LLVQEVN---PNVPVKSAVDIYVVYQGEGTTLAAFELAEKVRSELPHLNT-MLHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARV 471
             Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + + + 
Sbjct: 369 KKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGADQQTLDLVNVIDYIQTQF 423


>gi|259489767|tpe|CBF90310.1| TPA: histidyl-tRNA synthetase, mitochondrial precursor
           (AFU_orthologue; AFUA_4G12920) [Aspergillus nidulans
           FGSC A4]
          Length = 549

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 129/519 (24%), Positives = 218/519 (42%), Gaps = 64/519 (12%)

Query: 3   KKTKLRAEL--PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           K  KL  +L  P+G  D    ++ IR  I  +I  +++ +G   ++TP+ E  + L    
Sbjct: 59  KSNKLSFQLKTPKGTRDWIGVDMIIRESIFSAITEVFKRHGGTQLDTPVFELKEILAGKY 118

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   ++ ++ L D  G+  +LRYDLT PLAR++A N  T V   + ++I  V+R ++ 
Sbjct: 119 GED---SRLIYDLADQGGEDSALRYDLTVPLARWLAMN--TSVQHIKRFQIAKVYRRDQP 173

Query: 121 G--PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
               GR R+F QCD D  GS          + +   +      R+   I +N+RKILDG+
Sbjct: 174 AVAKGRMREFYQCDFDIAGSYDPMIPDAEVLRIVVEVFEALNMRDYITIKLNHRKILDGL 233

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
               G+ GD    +   +  A+DKLDK   + VKL + E              L  E  D
Sbjct: 234 FGACGVPGD----KIRSISSAVDKLDKLPWEQVKLEMEEK------------GLAPEVAD 277

Query: 239 IMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            +  ++ +   + + +     +L+       KG  ++ ++ + +       ++I    ++
Sbjct: 278 KVGQYVKLSGGRDILDTIRSDDLLSTNENVMKGVEDMELLFKYLEAFDVL-DKISFDLSL 336

Query: 296 VRGLEYYTGCVYEAILG--------------FPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            RGL+YYTG +YE +                    N + + +  GS+  GGRYD LV+ F
Sbjct: 337 ARGLDYYTGLIYEVVTPLSSAEGFAQSQKKSKSKSNGEDQNIGVGSIAAGGRYDDLVNMF 396

Query: 342 -KGQNVPATGFSIGISRLIVALKSLESSTNNI----KEMGPVLITTMDHDSD----SLSK 392
            K + +P  G S G+ R+   +K    +             V +  M          L +
Sbjct: 397 AKKRQIPCVGISFGVDRIFTIMKQRLENEAKEGNASMRASEVDVFVMAFGGKGFNGLLLE 456

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  L  AGI+AE           Q K A+    PLA+I G  E + G +++K+L  
Sbjct: 457 RMSVANQLWKAGIKAEFAQTVKPKLPQQFKLAEAGGIPLAVILGEDELAAGKVKLKEL-- 514

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                                  I   +LV  +KK L +
Sbjct: 515 ----------GLPEGHPEKDGTLISREDLVEEIKKKLNK 543


>gi|126668581|ref|ZP_01739535.1| histidyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126626986|gb|EAZ97629.1| histidyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 417

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 97/484 (20%), Positives = 182/484 (37%), Gaps = 76/484 (15%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++  +   +  ++R +   YG+  I  P++E +D   + + +  D   K +++ 
Sbjct: 1   MNDILPEQTPVWQYVEATVRKVLGQYGYQEIRMPIVEQTDLFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D +G  ++LR + TA   R   ++        R +  G +FR E+   GR+RQF Q  V
Sbjct: 61  DDRNGDSLTLRPEGTAGCVRAAEQHGLLFNQTRRMWYTGQMFRYERPQKGRYRQFHQVGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGLHGDD 188
           +  G +    DAE+ M+ A   +  G+  +     +       R+     L         
Sbjct: 121 ECFGMAGPDIDAELLMLTARLWKTFGLADHARLEINSIGTAEARRNYREALVAYLQQFKA 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L+E        D   +     +++L  +                 EQ   + ++L  + 
Sbjct: 181 ELDE--------DSQRRLESNPLRILDSKSAATRK---------VLEQAPKLDAWLDDES 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                 L +L+                               ++  +VRGL+YY   V+E
Sbjct: 224 RDHFERLKQLLDAA-----------------------GIEYTVNPALVRGLDYYGKTVFE 260

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            I         +     G++  GGRYDGLV +  G+   A GF++G+ RLI+ L++L   
Sbjct: 261 WIT--------ESLGAQGTICAGGRYDGLVEQLGGKPTVAVGFAMGVERLILLLETLNLI 312

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADR 426
             ++     V +T M     ++S   +  + LR    G    +    + +F +Q+K ADR
Sbjct: 313 PESVNNQADVYVTAMG--DQAVSPALLLAEELRDQLPGYII-IGHCGAGSFKSQMKKADR 369

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                A+I G  E     + +K L   +                  Q   P  ++   + 
Sbjct: 370 SGARYALILGDNELQNQSVGLKSLRTDE-----------------PQQEFPRQQVAEALA 412

Query: 487 KILQ 490
           + L 
Sbjct: 413 QALS 416


>gi|222630224|gb|EEE62356.1| hypothetical protein OsJ_17145 [Oryza sativa Japonica Group]
          Length = 848

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 128/468 (27%), Positives = 206/468 (44%), Gaps = 42/468 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            ++P+G  D   +++ IR      I  +++ +G   ++TP+ E  ++L GK+  D    +
Sbjct: 413 PKIPKGTRDFGKEQMAIREHAFSIITGVFKMHGAVSLDTPVFELRETLMGKYGED----S 468

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+
Sbjct: 469 KLIYDLADQGGELCSLRYDLTVPFARYVAMNN---ISSLKRYQIAKVYRRDNPSKGRYRE 525

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G           + +   L    +    Y I +N+RK+LDG+LE  G+  +
Sbjct: 526 FYQCDFDIAGVYETMEPDFEVIKVLTELLD-QLDIGTYEIKLNHRKLLDGMLEICGVPPE 584

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +   V  +IDKLDK   + VK  L +              +++E  D +   +   
Sbjct: 585 ----KFRTVCSSIDKLDKQTFEQVKKELVDE-----------KGISNETADKIGDLVKTR 629

Query: 248 LEK-----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                    + +      G        NEL ++ + + K      +I    ++ RGL+YY
Sbjct: 630 GPPLEVLLELRKEGSKFMGNAGSVTALNELEILFKALDK-ANAIGKIVFDLSLARGLDYY 688

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YEA+               GS+  GGRYD LV  F G+ VPA G S+GI R+   +
Sbjct: 689 TGVIYEAVFKGTT--------QVGSIAAGGRYDNLVGMFSGKQVPAVGVSLGIERVFAIM 740

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E    N        +       D +         L  AGI+AE  L +     N LK
Sbjct: 741 EQQE-MEKNQIRATETEVLVSIIGKDLILAA-ELVSELWNAGIKAEFKLTTR--IQNHLK 796

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           YA +   P  ++ G  E S G +++K+LA  +E   +        + +
Sbjct: 797 YATQSGIPWMVLVGESEISSGKVKLKNLAASQEEEVDRTEFAQVLKQK 844


>gi|125550869|gb|EAY96578.1| hypothetical protein OsI_18483 [Oryza sativa Indica Group]
          Length = 885

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 128/468 (27%), Positives = 206/468 (44%), Gaps = 42/468 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            ++P+G  D   +++ IR      I  +++ +G   ++TP+ E  ++L GK+  D    +
Sbjct: 450 PKIPKGTRDFGKEQMAIREHAFSIITGVFKMHGAVSLDTPVFELRETLMGKYGED----S 505

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+
Sbjct: 506 KLIYDLADQGGELCSLRYDLTVPFARYVAMNN---ISSLKRYQIAKVYRRDNPSKGRYRE 562

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G           + +   L    +    Y I +N+RK+LDG+LE  G+  +
Sbjct: 563 FYQCDFDIAGVYETMEPDFEVIKVLTELLD-QLDIGTYEIKLNHRKLLDGMLEICGVPPE 621

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +   V  +IDKLDK   + VK  L +              +++E  D +   +   
Sbjct: 622 ----KFRTVCSSIDKLDKQTFEQVKKELVDE-----------KGISNETADKIGDLVKTR 666

Query: 248 LEK-----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                    + +      G        NEL ++ + + K      +I    ++ RGL+YY
Sbjct: 667 GPPLEVLLELRKEGSKFMGNAGSVTALNELEILFKALDK-ANAIGKIVFDLSLARGLDYY 725

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YEA+               GS+  GGRYD LV  F G+ VPA G S+GI R+   +
Sbjct: 726 TGVIYEAVFKGTT--------QVGSIAAGGRYDNLVGMFSGKQVPAVGVSLGIERVFAIM 777

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E    N        +       D +         L  AGI+AE  L +     N LK
Sbjct: 778 EQQE-MEKNQIRATETEVLVSIIGKDLILAA-ELVSELWNAGIKAEFKLTTR--IQNHLK 833

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           YA +   P  ++ G  E S G +++K+LA  +E   +        + +
Sbjct: 834 YATQSGIPWMVLVGESEISSGKVKLKNLAASQEEEVDRTEFAQVLKQK 881


>gi|148825348|ref|YP_001290101.1| histidyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166227971|sp|A5UAB7|SYH_HAEIE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|148715508|gb|ABQ97718.1| histidyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 423

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 104/484 (21%), Positives = 190/484 (39%), Gaps = 74/484 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ M+     +A+G                   N
Sbjct: 116 PQKGRYRQFHQAGVEVFGIANPKIDAELIMLTYRLWKALGIDQYVTLQLNSIGSLEARAN 175

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L G LE       D+  +RL+               +++L  +             
Sbjct: 176 YRSALVGFLENHQDLMSDEEKDRLV------------KNPLRILDTKN---------PEL 214

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +    ++ +L  +  +   +L  L+                            + +
Sbjct: 215 QKVLDNAPKLLDYLDDESREHFEQLCSLLDA-----------------------VGIQYE 251

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V GGGRYDGLV +  G   P+ G
Sbjct: 252 INPKLVRGLDYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIG 303

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++ +     N+     V I  +     +        + +R+    +   
Sbjct: 304 FAMGLERLVLLVQEVN---PNVPVKSAVDIYVVYQGEGTTLAAFELAEKVRSELPHLNT- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWR 467
           M   S  NF  Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + 
Sbjct: 360 MLHCSGGNFKKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGADQQTLDLVNIIDYI 419

Query: 468 EARV 471
           + + 
Sbjct: 420 QTQF 423


>gi|323345248|ref|ZP_08085471.1| histidine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093362|gb|EFZ35940.1| histidine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 454

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 134/477 (28%), Positives = 212/477 (44%), Gaps = 55/477 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I D+I+ +Y  YGF  IETP LE   +L GK+  + D+ 
Sbjct: 4   KTSIPKGTRDFSPLEMAKRNYIFDTIKEVYALYGFQQIETPALETLQTLMGKYGDEGDKL 63

Query: 67  -------NKGVFSLQD---DDGQWI---------SLRYDLTAPLARYVAENFDTIVFPCR 107
                     +  L D    +   +          LRYDLT P ARYV  + D +  P +
Sbjct: 64  LFKVLNSGDYMSKLTDEELQERNSLRLASRLCEKGLRYDLTVPFARYVVMHLDELQLPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GR+R+F QCD D VGS++   + E+  ++        I+     I
Sbjct: 124 RYQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELMQIVDTVFTRFKIRVL---I 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL GI E IG     + ++ + +  AIDKLDK G+  V   L            
Sbjct: 181 KINNRKILSGIAEVIG-----EADKIVDITVAIDKLDKIGIDNVNAEL------------ 223

Query: 228 KGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
           +   ++   I+ +     L     + +  + E++  +  G KG  E   I  ++ K+G N
Sbjct: 224 RAVGISERAIEKLQPIILLEGTNREKLSTIAEVLASSETGLKGVEETRYIFNMLEKAGLN 283

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
            N I++  T+ RGL YYTG ++E          K      GS+ GGGRYD L   F    
Sbjct: 284 -NEIQLDLTLARGLNYYTGAIFEV---------KALDTPMGSITGGGRYDDLTGIFGMPG 333

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G  R+   L +L+       +   +L                     R  GI
Sbjct: 334 LSGVGISFGADRIYDVLNTLDLYPKESVKGTKLLFINFGEKET--EYCMPIVDAARKEGI 391

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             E++    K    Q+ YA+ +N P  ++ G  E +   + +KD+  G++    +++
Sbjct: 392 STEIYPDKVK-MKKQMSYANAKNIPFVVLAGDNEIAENKVTLKDMKTGEQQILTVQD 447


>gi|294340466|emb|CAZ88847.1| histidine tRNA synthetase [Thiomonas sp. 3As]
          Length = 425

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 97/484 (20%), Positives = 188/484 (38%), Gaps = 64/484 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    +        + +R +  +YG+  + TP+LEY+    + + +  D  
Sbjct: 4   KLSAVKGMNDIVPPKSAAWEWFEEQVRALMGSYGYQNLRTPILEYTPLFVRGIGEVTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G+ ++LR + TA + R   E+        R +  GP+FR+E+   GR+
Sbjct: 64  EKEMYSFTDALNGEPLTLRPEGTAAVVRACIEHSLLYDGGKRLWYTGPMFRHERPQRGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +G +    D E+ +M       +G+              L  +       
Sbjct: 124 RQFHQVGAEALGFAGPDVDVELILMARQLWARLGLSE------------LVTLEINCLGQ 171

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D++   R+ ++  +++      +  +  L                   E    ++ +L 
Sbjct: 172 ADERARHRVALIAYLEQHIDQLDEDTRRRLHSNPLRVLDTKNPAMQALVEGAPKLIDYL- 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                              GE        +  L+R +G +     ++  +VRGL+YY   
Sbjct: 231 -------------------GEASLAHFEGVQALLRAAGQS---FTLNPRLVRGLDYYNLT 268

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +     +V  GGRYDGL+ +  G+  PA G+++G+ R++  L   
Sbjct: 269 VFEWVT--------DRLGAQATVCAGGRYDGLIEQIGGKPTPACGWALGMERVLELLIEA 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +              +    + +S+     + LR AG+R ++ +G   +  +Q+K AD
Sbjct: 321 GQNAPVSAPHA----YAVMTSPELMSRVMPLCESLRAAGVRVQLHMGGG-SMKSQMKKAD 375

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                 A++ G  E   G + IKDL  G +                 Q  +P+  L + V
Sbjct: 376 ASGARWALVFGEQELQSGQVGIKDLR-GAQ-------------DAQQQRMLPLEPLQTLV 421

Query: 486 KKIL 489
             +L
Sbjct: 422 CALL 425


>gi|66768694|ref|YP_243456.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|81305334|sp|Q4UU37|SYH_XANC8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|66574026|gb|AAY49436.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 477

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 145/512 (28%), Positives = 231/512 (45%), Gaps = 71/512 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQDDDGQ------------------WISLRYDLTAPLARYVAENFDTIVFPCR 107
               V+      G                    ++LR+DLT PLARYVAE+   + FP R
Sbjct: 62  ---QVY-FVQSTGALANAAAAADEGAESGGLPELALRFDLTVPLARYVAEHEHELSFPFR 117

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ +
Sbjct: 118 RYQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKV 177

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +NNRK+L G  E +G+   +    +L VLR +DK+DK G + V+  L            
Sbjct: 178 QLNNRKLLRGFFESLGVAEGE---LQLAVLREVDKIDKRGAEYVRDTLT----------G 224

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRK 281
           +G  + + Q+D +++F+++        L +L      V  +    +G  EL  + ELV+ 
Sbjct: 225 EGFGIATAQVDKILAFVAVRSNGHADALAQLQALEASVGASATLGEGIAELREVLELVKA 284

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            G       ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S +
Sbjct: 285 LGVPETAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYENLASHY 336

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
               +P  G SIG++RL   L+         +     ++  M  D   L       + LR
Sbjct: 337 TKSKLPGVGISIGLTRLFWQLREAGLIAGIAESSVHAMVALM--DESRLDDALDIARRLR 394

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             GI  E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL   ++      
Sbjct: 395 IGGINTEVQM-EPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ------ 446

Query: 462 NNESWREARVAQITIPISELVSTVKKILQENK 493
                      Q  +   EL ST++  L++ K
Sbjct: 447 -----------QFDVARDELASTLQVELEQAK 467


>gi|261205666|ref|XP_002627570.1| histidyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239592629|gb|EEQ75210.1| histidyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 531

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 120/532 (22%), Positives = 211/532 (39%), Gaps = 71/532 (13%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           MGK+      + P+G  D    +  +R+RI  +I  +++ +G   ++TP+ E  D L   
Sbjct: 1   MGKEKVSFNLKTPKGTKDWFGSDGLLRDRIFSTITEVFKRHGATSLDTPVFELRDILAGK 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N +                   
Sbjct: 61  YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPNVRNIKRYHIAKVYRRDQPA 117

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAE--MCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
              GR R+F QCD+D  G++ +    +  +  +  +  E +G  +  Y I IN+RKILDG
Sbjct: 118 MSKGRMREFYQCDIDFAGANYDPMVPDAEILRIATEVFEELG-WKGRYTIKINHRKILDG 176

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           + E  G+  +    +   +  A+DKLDK     V+  + E              L S   
Sbjct: 177 LFEVCGVPKE----KIRTISSAVDKLDKMPWADVRREMVEE-----------KGLDSAVA 221

Query: 238 DIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           D + +++     + + E     E +   ++ + G  E+ ++ + +       ++I    +
Sbjct: 222 DKIETYVVQKGGRELVESLLSDEALLANLSAKTGLEEMALLMDYLEAFDIL-DKISFDMS 280

Query: 295 IVRGLEYYTGCVYEAILGFPVMN----------------------------EKQKPVVFG 326
           + RGL+YYTG +YE +                                        +  G
Sbjct: 281 LARGLDYYTGVIYEVVTEGSAPPAAPSAGEEAQNIQKKSKGKAKNDDDDDRSNDPSIGVG 340

Query: 327 SVGGGGRYDGLVSRFK-GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
           S+  GGRYD LV  F     +P  G S G+ R+    K+     N   ++  V +  M  
Sbjct: 341 SIAAGGRYDELVGMFSSRAQIPCVGISFGVDRIFSITKARMGENNRPNKLCDVDVYVMAF 400

Query: 386 DSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
                   L +     + L  AG++ E           Q   A+    P A+I G  E +
Sbjct: 401 GGKGFTGLLKERMEVARSLWDAGLKVEFSYKRKPKPIQQFDAAEANAVPFAVILGEDELA 460

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            G +++K++                       + + +S L   VK+ L+  K
Sbjct: 461 AGQVRVKEM------------GLDKGHPEKDGVLVNLSTLAEEVKERLERKK 500


>gi|242310423|ref|ZP_04809578.1| histidyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522821|gb|EEQ62687.1| histidyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 439

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 141/461 (30%), Positives = 220/461 (47%), Gaps = 40/461 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K  +      GF D   KE   ++++L SI N +E +GF PIETP LEY++ L K  
Sbjct: 1   MEDKMPITPRTLSGFKDRLPKEAYAKSQMLKSIINSFEKFGFSPIETPHLEYAEILKKQG 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   K ++   D   + ++LR+DLT PLAR++++  + +  P + Y IG VFR E+ 
Sbjct: 61  --SDEIQKEMYHFFDHGNREVALRFDLTLPLARFISQYKNDLGLPFKRYCIGNVFRGERA 118

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F QCD D +G+ +  +D E+  ++  TL  +G+K  ++ I INNRKI +G+ +
Sbjct: 119 QKGRYREFTQCDFDFIGTESLGSDIEILQVIYQTLSDLGLK--NFTIHINNRKIFNGLCQ 176

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +        +    +LR IDK+DK G   V   L +              L  EQI ++
Sbjct: 177 SLNAE-----SYTAEILRIIDKIDKIGKDSVTKELQDKT-----------PLQKEQIQVL 220

Query: 241 VSFLSIDLEKSMHELYELVKG----TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           + F+S+  E    +    +          ++G  EL  + E++ K     N   I+ +I 
Sbjct: 221 LDFISLKQEGDSLQFLSSLNHYKNINPTLKEGLEELESLCEILSKL-IPQNFYTINLSIA 279

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL YYTG +YE IL              GSV  GGRYD L   F    +   G SIG+ 
Sbjct: 280 RGLGYYTGIIYETILND--------LPNLGSVCSGGRYDNLTQNFSNDKMSGVGASIGLD 331

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+  L+ L   T N      ++        ++L     + Q LR  G++ E++   +K 
Sbjct: 332 RLLAGLEELNLITQNTPAEAILIPL------NNLQYAYTFAQNLRNLGMKIEVYPEITK- 384

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
                KYA+ +     II G  E S     +KD+  G++  
Sbjct: 385 PQKAFKYANNKGYKWVIITGENEESTNTASLKDMQSGEQKD 425


>gi|317025540|ref|XP_001389271.2| histidyl-tRNA synthetase [Aspergillus niger CBS 513.88]
          Length = 619

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 115/539 (21%), Positives = 211/539 (39%), Gaps = 75/539 (13%)

Query: 1   MGKKT----KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           M K+         + P+G  D    +  +R+RI  +I ++++ +G   ++TP+ E  + L
Sbjct: 96  MPKEKESKLSFNLKTPKGTKDWSGSDALLRDRIFSTIADVFKRHGGTALDTPVFELREIL 155

Query: 57  GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
                ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                
Sbjct: 156 AGKYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRSMKRYHIAKVYRRD 212

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
                 GR R+F QCD D  G+          + +   +         Y+I IN+RKILD
Sbjct: 213 QPAVSKGRMREFYQCDFDIAGTFDPMVPDAEILRIVTEVFEELGWNGRYNIKINHRKILD 272

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ +  G+  +    +   +  A+DKLDK     V+  + E              L S  
Sbjct: 273 GVFQVCGVPEE----KIRPISSAVDKLDKMPWADVRKEMVEE-----------KGLDSAV 317

Query: 237 IDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            D + +++     + + +     E +    + + G  ++ ++ + +   G   ++I    
Sbjct: 318 ADKIETYVMHKGGRELLDNLLKDEGLTANESAKAGLEDMGLLMDYLEAFGVL-DKISFDM 376

Query: 294 TIVRGLEYYTGCVYEAILG------------------------------FPVMNEKQKPV 323
           ++ RGL+YYTG +YE +                                          +
Sbjct: 377 SLARGLDYYTGVIYEVVTEGSAPAVASSAPEAQAVQKSGKKSKSKGGNLEDDDRSNDPTL 436

Query: 324 VFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVA----LKSLESSTNNIKEMGPV 378
             GSV  GGRYD LV  F     +P  G S G+ R+       L+  +S+          
Sbjct: 437 GVGSVAAGGRYDNLVGMFLPKAQIPCVGVSFGVDRIFSITKARLEREKSAEALRSSEVDA 496

Query: 379 LITTMDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            +           L +     Q L  +G++AE           Q K A++   P A+I G
Sbjct: 497 YVMAFGGKGFTGMLKERMSVCQTLWNSGVKAEFSYKVKPKLPQQFKAAEQAGVPFAVILG 556

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
             E + G +++K++         +++    +E     + + ++ L + VK  + + + E
Sbjct: 557 EDELAAGKVRVKEM--------GLEDGHPEKEG----VLVDLTALPAEVKARVAKKRGE 603


>gi|284166745|ref|YP_003405024.1| histidyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016400|gb|ADB62351.1| histidyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 434

 Score =  239 bits (610), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 121/456 (26%), Positives = 193/456 (42%), Gaps = 35/456 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF D    E+  R  ++D++      YGF  + TP LE +        +E    + +++
Sbjct: 6   KGFRDFYPAEMGARREVIDTLEATARRYGFREVGTPALERTQMYVDKSGEEIV--EELYA 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +D  G+ ++L  +LT  +AR V      +  P +     P +R E+   GRFR+F Q +
Sbjct: 64  FEDKGGREVALTPELTPTVARMVVAKQQELSKPIKWVSTRPFWRYEQVQQGRFREFYQTN 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD  GSS   ADAE+    AD L  +G+   ++   +++R IL G+ E      D     
Sbjct: 124 VDIFGSSEPEADAEILAFAADALTDLGLTGEEFEFRVSHRDILGGLFESFDADVDTAA-- 181

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               +RA+DK +K                   D    A L+ +Q       L++  E  +
Sbjct: 182 ---AIRAVDKSEKISHNEY------------HDLLVDAGLSYDQAAEFDDLLAV-GEDDL 225

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            EL E   GT   E     L  + E     G       +S    RGL+YYTG V+E    
Sbjct: 226 DELVE-FAGTDRVEAAVTNLQNVLEAAADFGARE-YCTLSLETARGLDYYTGVVFECFDS 283

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              ++         SV GGGRYD L+  F GQ  PA G + G++ L + L+  +   +  
Sbjct: 284 TGEVS--------RSVFGGGRYDDLIESFGGQPTPAVGVAPGLAPLSLLLQRADVWPDEA 335

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 ++       D+ S+     + LR  G   E  + + ++FG+QL YAD  N    
Sbjct: 336 FTTDYYVLQI----GDTRSEAARIVRDLRERGHVVETDV-ADRSFGSQLNYADSINAETV 390

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++ G  +     + IKD+  G +    I      RE
Sbjct: 391 VVAGEQDLENDEVTIKDMESGDQTQAPIDEFPGDRE 426


>gi|148238579|ref|YP_001223966.1| histidyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166228624|sp|A5GIA4|SYH_SYNPW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|147847118|emb|CAK22669.1| Histidyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 441

 Score =  239 bits (610), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 96/458 (20%), Positives = 184/458 (40%), Gaps = 55/458 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   ++ R    +    R+ +   G + I TPLLE ++   + + +  D  
Sbjct: 3   QLQSLRGMVDLLPEQTRRWQAVEAVARDHFRRAGVEEIRTPLLEVTELFARGIGEGTDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S  D   +  +LR + TA + R   ++        + +  GP+FR E+   GR R
Sbjct: 63  GKEMYSFLDRGERSCTLRPEGTASVVRAAMQHGLLNQGAQKLWYAGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLH 185
           QF Q  V+ +G S+  +D E   +  D L A+G++  +  I      +       ++   
Sbjct: 123 QFHQIGVECLGVSSARSDVEAIALAWDLLAALGVQGLELEINSLGTPEDRQCYRAELVAW 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + + ++        D   +     +++L  + +   +                ++  LS
Sbjct: 183 LEARRDQLD-----ADSQQRLTTNPLRILDSKNKATQA---------LLADAPTLLEALS 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +  +   ++  L+                              K+++ +VRGL+YY   
Sbjct: 229 PESAQRFAQVQALL-----------------------HQLGIPFKLNTRLVRGLDYYGHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E            +     +V GGGRYDGLV +  G   PA G+++G+ RL++ L++ 
Sbjct: 266 AFEIT--------SDQLGAQATVCGGGRYDGLVEQLGGPATPAIGWALGMERLLLVLEAA 317

Query: 366 ESSTNNIKEMGPVL-----ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
             +          +     +  ++    + +     T+ LR AG+  E+  GS   FG Q
Sbjct: 318 AKADPAGAAAQLTMSAPPEVYVVNRGEAAEAVALSLTRSLRLAGVAVELD-GSGAAFGKQ 376

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDL--AKGKEL 456
            K ADR   P A + G  E + G++ +K L    G + 
Sbjct: 377 FKRADRSGAPWAAVIGDEEAASGVVCLKPLLREGGDQR 414


>gi|239611218|gb|EEQ88205.1| histidyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 531

 Score =  239 bits (610), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 120/532 (22%), Positives = 211/532 (39%), Gaps = 71/532 (13%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           MGK+      + P+G  D    +  +R+RI  +I  +++ +G   ++TP+ E  D L   
Sbjct: 1   MGKEKVSFNLKTPKGTKDWFGSDGLLRDRIFSTITEVFKRHGATSLDTPVFELRDILAGK 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N +                   
Sbjct: 61  YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPNVRNIKRYHIAKVYRRDQPA 117

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAE--MCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
              GR R+F QCD+D  G++ +    +  +  +  +  E +G  +  Y I IN+RKILDG
Sbjct: 118 MSKGRMREFYQCDIDFAGANYDPMVPDAEILRIATEVFEELG-WKGRYTIKINHRKILDG 176

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           + E  G+  +    +   +  A+DKLDK     V+  + E              L S   
Sbjct: 177 LFEVCGVPKE----KIRTISSAVDKLDKMPWADVRREMVEE-----------KGLDSAVA 221

Query: 238 DIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           D + +++     + + E     E +   ++ + G  E+ ++ + +       ++I    +
Sbjct: 222 DKIETYVVQKGGRELVESLLSDEALLANLSAKTGLEEMALLMDYLEAFDIL-DKISFDMS 280

Query: 295 IVRGLEYYTGCVYEAILGFPVMN----------------------------EKQKPVVFG 326
           + RGL+YYTG +YE +                                        +  G
Sbjct: 281 LARGLDYYTGVIYEVVTEGSAPPAAPSAGEEAQKIQKKSKGKAKNDDDDDRSNDPSIGVG 340

Query: 327 SVGGGGRYDGLVSRFK-GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
           S+  GGRYD LV  F     +P  G S G+ R+    K+     N   ++  V +  M  
Sbjct: 341 SIAAGGRYDELVGMFSSRAQIPCVGISFGVDRIFSITKARMGENNRPNKLCDVDVYVMAF 400

Query: 386 DSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
                   L +     + L  AG++ E           Q   A+    P A+I G  E +
Sbjct: 401 GGKGFTGLLKERMEVARSLWDAGLKVEFSYKRKPKPIQQFDAAEANAVPFAVILGEDELA 460

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            G +++K++                       + + +S L   VK+ L+  K
Sbjct: 461 AGQVRVKEM------------GLDKGHPEKDGVLVNLSTLAEEVKERLERKK 500


>gi|332188256|ref|ZP_08389984.1| histidyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332011755|gb|EGI53832.1| histidyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 440

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 95/485 (19%), Positives = 176/485 (36%), Gaps = 66/485 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +      +  RG  D    E R    +L +   ++E Y F  ++ P+ E +    + +
Sbjct: 1   MARIE--TPKRVRGTQDIFGDEQRRFAEVLRTFEQVHELYAFQRLDLPVFEDTQVFARSI 58

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D  G  ++LR + TA +AR           P +    GPVFR E+
Sbjct: 59  GETTDVVSKEMYTFPDRGGDMLTLRPEFTAGIARAYLTEGWQQYAPLKLVTSGPVFRYER 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q D + +G++   AD E+ +M    L  +GI        +       R  
Sbjct: 119 PQKGRYRQFHQIDAEILGAAEPAADVELLVMADQLLHELGIAEGVTLQLNTLGDAETRDA 178

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D+L+E        D L +     +++L  +   D            +
Sbjct: 179 WRDALVAHFEAHRDQLSE--------DSLVRLEKNPLRILDSKDPRDRP---------IA 221

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +    + ++L+ +       +   +            L                      
Sbjct: 222 DAAPDIDAYLTPEARAFFEAVTAGLDAAGVAWTRNARL---------------------- 259

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY    +E +          +    G+V  GGRYDGL+    G   P  G++ G
Sbjct: 260 -VRGLDYYRHTAFEFVT--------DRLGAQGTVLAGGRYDGLIESLGGPATPGVGWAAG 310

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL + L               +    +   + +  +       LR AG+  +M     
Sbjct: 311 VERLAMLLDE--------PAKPVIDAVVVPMGAAAELRATGLVAELRRAGVATDMAFRG- 361

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            N   ++  A+ +    A+I G  E + G +Q+K LA G++ +  +++        +   
Sbjct: 362 -NMKRRMAKANDQGASYALILGDDELANGQVQVKALATGEQATVPLESVSQSIFDLLFGD 420

Query: 475 TIPIS 479
            +   
Sbjct: 421 AVATE 425


>gi|294628353|ref|ZP_06706913.1| histidyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292831686|gb|EFF90035.1| histidyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 420

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 92/474 (19%), Positives = 175/474 (36%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I     N G+  IETP  E  +   + + +  D  
Sbjct: 3   TFKAPKGTYDLIPPDSAKFLAVREAIAAPLRNSGYGYIETPGFENVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++ +   G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYAFETKGGDKLALRPEGTASVLRAALEANLHKAGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G++          D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLRNFRILLNSLGDKECRPIYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  D      +  LR +D         V+  L +                   
Sbjct: 183 DFLRGLDLDEDTLRRAEINPLRVLDDKRP----DVQKQLTD------------------- 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+ EL+       +   +L                       V
Sbjct: 220 APLLRDYLCDGCKAYHEEVRELITAAGVSFEDDPKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++               +  +    ++          LR  G+ A+   G  K 
Sbjct: 309 RTVLALEAEGVELQLP---ATTSVFAVPLGEEARRVLFAKVTELRKNGVAADFSYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R     A++ G  + + G++Q+KD+  G++++  +    +  E+R
Sbjct: 365 LKAAMKAANRSGARYALVMGERDLAEGVVQLKDMESGEQVAIGVNEIVAELESR 418


>gi|145640319|ref|ZP_01795903.1| histidyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274905|gb|EDK14767.1| histidyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 423

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 106/484 (21%), Positives = 191/484 (39%), Gaps = 74/484 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ M+     +A+G                   N
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIMLTYRLWKALGIDQHVTLQLNSIGSLEARAN 175

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L G LE      +D+  ERL+               +++L  +             
Sbjct: 176 YRSALVGFLENHQDLMNDEEKERLV------------RNPLRILDTKN---------PEL 214

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +    ++ +L  +      +L  L+                            + +
Sbjct: 215 QKVLDNAPKLLDYLDDESRAHFEQLCSLLDA-----------------------VGIQYE 251

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V GGGRYDGLV +  G   P+ G
Sbjct: 252 INPKLVRGLDYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIG 303

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++ +     N+     V I  +     +        + +R+    +   
Sbjct: 304 FAMGLERLVLLVQEVN---PNVPAKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNT- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWR 467
           M   SS NF  Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + 
Sbjct: 360 MLHCSSGNFKKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYL 419

Query: 468 EARV 471
           + + 
Sbjct: 420 QTQF 423


>gi|154250128|ref|YP_001410953.1| histidyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769393|sp|A7HN13|SYH_FERNB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|154154064|gb|ABS61296.1| histidyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 421

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 113/471 (23%), Positives = 194/471 (41%), Gaps = 59/471 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            +  +G  D    E++    I    +++   YG+  I TP+ E +    + +  D D   
Sbjct: 2   YQKIKGTEDLYGDEMKYWYWIEKKAKDLAIRYGYGEIRTPIFEETKLFIRSVGQDTDIVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D  G+ I+LR + TAP+ R   E+      FP + + IGP+FR E+   GR R
Sbjct: 62  KEMYTFEDKGGRSITLRPEGTAPVVRAFVEDGMIAQGFPQKYFYIGPMFRYERPQSGRQR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGILEKI 182
           QF Q   +  GSS+  ADAE+ +     ++ +G+     HI     I +R      L++ 
Sbjct: 122 QFHQFGAEIFGSSSAIADAELIIFADRLMKEIGLVDYQIHINSLGDIEDRVKYREALKEY 181

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                + L          D   ++    ++LL  +   + + +              +  
Sbjct: 182 YAQHLENL--------CDDCKVRYEKNVLRLLDCKVDIEYTKN-----------APKITD 222

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +  K   EL  L+                            +   +  +VRGL+YY
Sbjct: 223 YLGENSRKHYEELKALLDS-----------------------VGIKYIENPRLVRGLDYY 259

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E           QK     ++ GGGRYDGL+    G++VPA GF+ GI RLI+AL
Sbjct: 260 NRTVFEI--------HHQKLGAMSAIAGGGRYDGLIKEIGGKDVPALGFATGIERLILAL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+     + I+     +      D    ++    ++ LR  GI   + L   +    QLK
Sbjct: 312 KAENVLVDEIETNVVYIAYLGGFDVK--AEAIRLSEELRREGIPVGLELME-RGLSAQLK 368

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            A R      II G  E  R ++ +K++  G++L  E     S  +  + +
Sbjct: 369 NAARVGAKFTIIVGESELERNIVLVKNMETGEQLEFERSFVVSGIKDMITE 419


>gi|218441904|ref|YP_002380233.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226737066|sp|B7KFP0|SYH_CYAP7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|218174632|gb|ACK73365.1| histidyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 430

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 99/481 (20%), Positives = 187/481 (38%), Gaps = 63/481 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    E+    ++      I     +  I  P+ E +    + + +  D   
Sbjct: 4   IQALRGTRDILPHEVGYWQQVERVAAEILSRALYLEIRPPIFEQTALFERGIGEGTDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D   + I+LR + TA + R   E+         R +  GP+FR E+   GR R
Sbjct: 64  KEMYTFKDRGDRSITLRPEGTAGVVRSFIEHNLYATGGVQRLWYTGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEKI 182
           QF Q  ++ +GS    AD E+  +  D L+ +G+K     +       +R+     L   
Sbjct: 124 QFHQIGLELLGSGDYRADVEVIALATDILQTLGLKNLKLDLNSVGNREDRQNYRQALVDY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                 +L+         D  D+     +++L  +              +  +    ++ 
Sbjct: 184 LTPYKAQLD--------PDSQDRLERNPLRILDSKDERTK---------IICQDAPSILE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + ++   ++ +L+                          + + +++  +VRGL+YY
Sbjct: 227 YLGTESKRHFEQVQQLLGDL-----------------------NIKYQLNPCLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E         +        +V GGGRYDGLV    G   PA G++IG+ RLI+ L
Sbjct: 264 THTAFEI--------QSDDLGAQATVCGGGRYDGLVVELGGPATPAVGWAIGMERLILLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L+S+     +     I  +     + S+  +  Q LR  G+  E+ L S   FG Q K
Sbjct: 316 QQLQSTPTLTPD-----IYIVSRGEKAESQGLILAQKLRHWGLSVELDL-SGSAFGKQFK 369

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS---REIKNNESWREARVAQITIPIS 479
            ADR      +I G  E     +Q+K +   ++ +    E+ +     +    +      
Sbjct: 370 RADRTGAIACLILGDQEAENQTVQLKWMTSSQQQTLTQVELLSQLEELKQSFDRHRQSRD 429

Query: 480 E 480
           +
Sbjct: 430 D 430


>gi|150016422|ref|YP_001308676.1| histidyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149902887|gb|ABR33720.1| histidyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 417

 Score =  239 bits (609), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 97/462 (20%), Positives = 181/462 (39%), Gaps = 56/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D   ++    + I  + R + + YG   I TP+ E+++   + + D  D 
Sbjct: 3   IEMQAPKGTKDMLPEDAYKWHYIESAFRKVAKTYGIREIRTPMFEHTELFLRSVGDTTDI 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + I+L+ + TA   R   EN       P + Y I P FR E    GR
Sbjct: 63  VQKEMYTFNDKGNRSITLKPEGTASAVRAFVENRLFNEAQPTKLYYITPAFRYENVQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
            RQF QC ++  GS+A + DAE+  +  DTL+ +G+K        +          E + 
Sbjct: 123 LRQFHQCGLEVFGSNAASMDAEVIAVAMDTLKELGLKSLSLNINNLGCPSCRPKYNEALK 182

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D  +            D+F    +++L  + +     + TK A +       ++ +
Sbjct: 183 KFLADNYDGLCDTC-----KDRFEKNPMRIL--DCKEKKCHEITKNAPI-------ILDY 228

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  +     +++ E +                               I   IVRGL+YYT
Sbjct: 229 VCEECSTHFNKVKEYLD-----------------------ILGLPYTIDPGIVRGLDYYT 265

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             ++E +                +V GGGRYD L+    G ++PA GF +G+ RLI+ L+
Sbjct: 266 KTIFEILTSD------------FTVCGGGRYDKLIEELGGPDMPAVGFGMGVERLIMTLE 313

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                   I +     +                   LR  G++ E+     ++   ++KY
Sbjct: 314 KENI---EIPKEKLFDLYIGARGEAESKYAFKLASDLRALGVKCEINH-MGRSVKAEMKY 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++       I G  E +   + +K ++ G+     +++   
Sbjct: 370 ANKLGAAFTTILGEDELTNRKVNLKRMSDGEIFEVSLEDLME 411


>gi|325116613|emb|CBZ52166.1| putative histidyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 1129

 Score =  239 bits (609), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 124/521 (23%), Positives = 212/521 (40%), Gaps = 64/521 (12%)

Query: 8    RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
              + P+G  D    ++ +R  +L ++R+++  +G   I+TP+ E  ++L     +     
Sbjct: 616  IPKAPKGTQDFGPAQMAVRELVLGAVRDVFRRHGGVEIDTPVFELRETLLGKYGEN---Q 672

Query: 68   KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR- 126
            K V+ L+D  G+ +SLRYDLT P ARYVA +    +   R + IG V+R ++    R R 
Sbjct: 673  KLVYDLKDQGGEQLSLRYDLTVPFARYVASH---DIEKIRRFHIGKVYRRDEPQMNRGRF 729

Query: 127  ---QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
                    D+  V       DAE   +M + L  +      + +  N+R +LDG++E  G
Sbjct: 730  REFYQCDFDIAGVSPVKMVPDAEAVCIMVEALRTLQRMVGKFLVKTNHRGLLDGMMEVCG 789

Query: 184  LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            L  D    +      +IDKLDK     V+  L E              + +  +D +   
Sbjct: 790  LPAD----KFTTACSSIDKLDKEPWTAVRQELVE-----------TKGIAAAVVDRLGEL 834

Query: 244  LSIDLEKSM----HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            + +    S                   +   E+ + S+ +   G  ++      ++ RGL
Sbjct: 835  VQMRGTFSQIIADLGKKPEFASNEKVARALEEMEIFSQYIEAMGVQADEAIFDLSLARGL 894

Query: 300  EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            +YY+G ++EA+L              GSVGGGGRYD LV  F G++VPA G S+G+ RL 
Sbjct: 895  DYYSGVIFEAVLL------GTDGAAVGSVGGGGRYDKLVGMFSGRDVPAVGMSVGVERLF 948

Query: 360  VALK-------------SLESSTNNIK--------------EMGPVLITTMDHDSDSLSK 392
              ++               +  + + K                    +       + L  
Sbjct: 949  RMVEKSLGMAAALPGAAEEDKHSGDKKKKKEKATPETPSLVRESFTDVLVCSVGDNMLKA 1008

Query: 393  YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                   L   GI AE F GS      Q+  A +R  PL +I G  E  R   +++ L  
Sbjct: 1009 CMQVAGCLWRNGIAAEFFYGSGAKLKKQMDLACQRRIPLLVILGEEELKRNTAKVRQLWY 1068

Query: 453  GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
              ++ R   N E+ +  +  Q  + + +L   +K    ++ 
Sbjct: 1069 DDDVKRPDANEEAAKGEKEEQ--VSLDQLPQVIKAYFCQHG 1107


>gi|145636363|ref|ZP_01792032.1| histidyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145270528|gb|EDK10462.1| histidyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 423

 Score =  239 bits (609), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 106/484 (21%), Positives = 191/484 (39%), Gaps = 74/484 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGIN 170
              GR+RQF Q  V+  G +    DAE+ M+     +A+G                   N
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIMLTYRLWKALGIDQHVTLQLNSIGSLEARAN 175

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L G LE      +D+  ERL+               +++L  +             
Sbjct: 176 YRSALVGFLENHQDLMNDEEKERLV------------RNPLRILDTKN---------PEL 214

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               +    ++ +L  +      +L  L+                            + +
Sbjct: 215 QKVLDNAPKLLDYLDDESRTHFEQLCSLLDA-----------------------VGIQYE 251

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY   V+E +               G+V GGGRYDGLV +  G   P+ G
Sbjct: 252 INPKLVRGLDYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIG 303

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ ++ +     N+     V I  +     +        + +R+    +   
Sbjct: 304 FAMGLERLVLLVQEVN---PNVPAKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNT- 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWR 467
           M   SS NF  Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + 
Sbjct: 360 MLHCSSGNFKKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYL 419

Query: 468 EARV 471
           + + 
Sbjct: 420 QTQF 423


>gi|163856331|ref|YP_001630629.1| histidyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163260059|emb|CAP42360.1| hisS [Bordetella petrii]
          Length = 431

 Score =  239 bits (609), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 104/491 (21%), Positives = 189/491 (38%), Gaps = 66/491 (13%)

Query: 1   MGKKTKL--RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M K T+   +    RG  D    +     +    +R     YG+  + TP+LE++    +
Sbjct: 1   MKKMTQAFQKVAAIRGMNDVLPGDGARWEQFESIVREWLRGYGYRNVRTPVLEHTRLFAR 60

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K +++  D  +G  +++R ++TA + R   E+      P R Y IGPVFR
Sbjct: 61  GIGEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGVVRASIEHNLLYDRPQRVYSIGPVFR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q DV+ +G +    DAE+ +M+A   + +G+      +    +    
Sbjct: 121 HERPQRGRYRQFHQIDVEALGFAGPDVDAELIVMLARLWKRLGLTDVRLELNSLGQPAER 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +     +           + 
Sbjct: 181 AAHRAALIEHLERHRDILD----EDGQRRLYSNPLRVLDTKNPAMQAMA---------DS 227

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +  FL  +       L +L+                              +++  +V
Sbjct: 228 APRLFDFLGDESRAHFDGLCQLLADA-----------------------GIEYRLNPRLV 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          +    G+V GGGRYDGL+    G+  PA GF+IG+ 
Sbjct: 265 RGLDYYNLTVFEWVT--------DRLGAQGTVCGGGRYDGLIELLGGKPAPAVGFAIGME 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+   +     +          +  +     +        + LR AG+   +  GSS  
Sbjct: 317 RLLDLWEQ----SVPPAPTPECEVYVVHQGEAAQRLAARVGEQLRDAGLSVIVHAGSSG- 371

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           F +Q K AD     +A+I G+ E + G   +K L              +      AQ  +
Sbjct: 372 FKSQFKRADASGARVAVILGSDEVAAGTASVKFLR-------------ADAAGEAAQQQV 418

Query: 477 PISELVSTVKK 487
            +  L   +K 
Sbjct: 419 ALDRLADVLKS 429


>gi|318042801|ref|ZP_07974757.1| histidyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 420

 Score =  239 bits (609), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 92/449 (20%), Positives = 175/449 (38%), Gaps = 59/449 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   +   +  RI  + R+ +     + I TP+LE ++   + + +  D  
Sbjct: 3   KLQSLRGMVDLLPQSAPLWQRIEATARSHFARAAIEEIRTPVLEATELFARGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D   +  +LR + TA + R   ++      P R +  GP+FR E+   GR R
Sbjct: 63  GKEMYTFTDRGERSCTLRPEGTASVVRAAIQHGLLSQGPQRLWYGGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKI 182
           QF Q  ++ +G +   +D E   +  D L  +G++      +     ++R      L   
Sbjct: 123 QFHQIGLEMLGFADPRSDVEAIAVAWDLLADLGVQGLALELNSLGSSDDRARYREQLVAW 182

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D+L+         D  D+     +++L  +    ++      A   +E +     
Sbjct: 183 LSERADQLD--------PDSQDRLQRNPLRILDSK--NPDTQALLTDAPTLAEALSP--- 229

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                   +  +    ++  +   G      +++  +VRGL+YY
Sbjct: 230 ------------------------ESRDRFARVTHGLTLLGIP---FQLNPRLVRGLDYY 262

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +   +E            +     +V GGGRYDGLV +  G    A G+++G+ RL + L
Sbjct: 263 SHTAFEITST--------QLGAQATVCGGGRYDGLVEQLGGPPTAAIGWALGMERLAILL 314

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
               ++     E     +  +     +        + LR AG   ++ L  +  FG Q K
Sbjct: 315 AQAGAAPAAAPE-----VYVVSRGEQAEPLALQLARQLRQAGHAVDLDLTGAA-FGKQFK 368

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLA 451
            ADR     A++ G  E   G++ +KDL 
Sbjct: 369 RADRTGARWAVVIGDSEAEAGVVLLKDLR 397


>gi|58038523|ref|YP_190487.1| histidyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81672761|sp|Q5FUR8|SYH_GLUOX RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|58000937|gb|AAW59831.1| Histidyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 415

 Score =  239 bits (609), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 99/462 (21%), Positives = 191/462 (41%), Gaps = 64/462 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + PRG  D   + +R  + ++++ R +   YGF+   TP+ E +    + L +  D  +
Sbjct: 4   LQPPRGTHDLIGETMRRHHHVVETARRVLRTYGFEEWSTPIFEDTRVFSRTLGETSDVVS 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++ +D  G+ I+LR + TA + R +  N  T   P + +  G +FR E+   GR+RQ
Sbjct: 64  KEMYTFEDRGGESITLRPEGTAAICRALVTNGLTQSLPQKVFYHGSMFRYERPQKGRYRQ 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKI 182
           F Q   + +G+ +   DAE   M  D L  +G+  +     +    + +R+     L   
Sbjct: 124 FHQIGAELIGAESPLRDAETIAMAQDILRELGLGDHVTLELNTLGDLASRQAWREALVAY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D L+E        +   +     +++L  +   D             +       
Sbjct: 184 FRDHADALSE--------ESRVRLEANPLRILDSKSEQDRK---------LLDAAPAFAD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+ D  +    L   ++                               +  IVRGL+YY
Sbjct: 227 YLNDDSRQFWDGLRSSLQAFGVD-----------------------FVENPRIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +   +E +          K    G+V  GGRY+GLV +  G  +PA G++ GI RL + L
Sbjct: 264 SHTAFEFVTS--------KLGAQGTVLAGGRYEGLVEQMGGPAIPAIGWAGGIERLAMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            S+              I  +    +++ K     ++LR+AG+RAE+   +  N   +++
Sbjct: 316 DSVPELP--------AGIALVPMGDEAVLKAASIARVLRSAGLRAEI--ETRGNMKKRME 365

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              +     AI+ G  E ++ ++Q++DL+  ++    + +  
Sbjct: 366 RVVKSGASHAIVLGDEEIAKNIVQLRDLSSREQQEVPVADLA 407


>gi|104780241|ref|YP_606739.1| histidyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123079257|sp|Q1IEI0|SYH_PSEE4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|95109228|emb|CAK13925.1| histidyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 428

 Score =  239 bits (609), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 102/487 (20%), Positives = 190/487 (39%), Gaps = 74/487 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  +      ++  + ++YG+  I TP++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPDQSPLWRYFEGTVAGLLDSYGYSQIRTPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNE 118
            +  D   K +++ QD +   ++LR + TA   R V E+         + + +GP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFQD-NKDSLTLRPEGTAACVRAVLEHGIIGNGQVQKLWYVGPMFRHE 115

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           +   GR+RQF Q  V+    +    DAE+ M+       +G                   
Sbjct: 116 RPQLGRYRQFHQIGVEVFNLAGPDIDAELIMLTWRLWALLGIQDAVTLELNSLGTSEARA 175

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L +     D+            D   +     +++L  +   + +     G
Sbjct: 176 RYRDALVEFLSQRIDQLDE------------DSQRRLKSNPLRILDSK--NEGTQAALVG 221

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A    E +D                           E+       +   +  +G      
Sbjct: 222 APKLEEYLD---------------------------EESRVHFEGVKARLDAAGIP---F 251

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I++ +VRGL+YY+  V+E +          K    G+V  GGRYDGLV +  G+     
Sbjct: 252 VINTKLVRGLDYYSKTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQMGGKPTAGV 303

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++GI RL++ +++L     +I     V +      ++        ++ LR     +R 
Sbjct: 304 GFAMGIERLLLLIETLGQVPESISRTIDVYLCAFGEQAEL--AGLKISEQLRDRLPNLRL 361

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
            +  G   NF NQ K AD+     A+I G  E ++  + +K L  +G++ +       + 
Sbjct: 362 AVNAGGG-NFKNQFKKADKSGALFALILGDDELAKQEIGVKPLRGQGEQQNIAWDALAAH 420

Query: 467 REARVAQ 473
            E  +AQ
Sbjct: 421 LETAIAQ 427


>gi|257093696|ref|YP_003167337.1| histidyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046220|gb|ACV35408.1| histidyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 431

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 97/489 (19%), Positives = 181/489 (37%), Gaps = 64/489 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    E        D+IR+  ++YG+ PI  P++E +    + + +  D  
Sbjct: 5   KIQSVRGMNDILPDEAEFWEMFEDTIRSWLKSYGYRPIRLPVVEPTPLFKRAIGEVTDIV 64

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G+ ++LR + TA   R   ++        R Y +G +FR+E+   GR+
Sbjct: 65  EKEMYSFVDTLNGEPLTLRPEGTAGCVRAAIQHNLVAQQTQRLYYLGQMFRHERPQKGRY 124

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+++G +    DAE  +M A     +G+      I +    + +         
Sbjct: 125 RQFHQVGVESLGFTGPDIDAEQILMGARLWNDLGLDG----IALQINTLGEPAERARHRA 180

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  E        D   +     +++L  +       D   GA         ++  L 
Sbjct: 181 ELIRYFEHNGDRLDDDGRRRLHTNPLRILDSK--NPALEDLILGA-------PKLIDHLG 231

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +       + ++++                              I+  +VRGL+YY   
Sbjct: 232 AESLAHFEGVQQVLRDAGQ-----------------------PFTINPRLVRGLDYYNLT 268

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G+V  GGRYDGLV +  G+  PA GF++     +  L +L
Sbjct: 269 VFEWVT--------DRLGAQGTVCAGGRYDGLVQQLGGKPTPACGFAM----GVERLIAL 316

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                   +   V +  +   + +        + LR  GI   +F      F  Q+K AD
Sbjct: 317 IREAGGEAKAAAVDVYLVHQGTAASRLAVRVAEALRDQGIDV-LFHCGGGGFKAQMKKAD 375

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                 A+I G  E   G + +K L              +  +    Q  + +  +   +
Sbjct: 376 ASGASFAVIIGDDEADAGEVTLKLLR-------------ATDKQANEQQRVSVDGVADAI 422

Query: 486 KKILQENKE 494
              + + +E
Sbjct: 423 MSHILDWEE 431


>gi|319789550|ref|YP_004151183.1| histidyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114052|gb|ADU96542.1| histidyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 410

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 98/455 (21%), Positives = 178/455 (39%), Gaps = 56/455 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +  RG  D    E     +++D+ + + +  GF  +  P+ E      + + +  D 
Sbjct: 1   MEFKAIRGVEDLLPPESEKFEKVVDTFKKVVKRAGFKEVILPIFEDVRLFTRSVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K ++  +D  G+ I+LR + TA   R   E+      P  + + +GP+FR E+   GR
Sbjct: 61  VQKEMYVFEDKGGRTIALRPEGTASAVRAYIEHGVFAKEPFTKWFYVGPMFRFERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q   +  G     ADAE+  +    L+A+ ++       I           K+  
Sbjct: 121 RRQFFQAGCEVFGLEQPGADAEVIYLAHSLLKALAVEAELELNSIGCSSCRPEYRGKLLE 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             ++   +          L +F    +++L  +          +      E+   +  +L
Sbjct: 181 FLEENKGQLCENC-----LSRFERNPLRVLDCKE---------EQCRAVVEKAPKITDYL 226

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + ++   ++ EL+                              K +  +VRGL+YYT 
Sbjct: 227 CRECKEHYEKVKELL-----------------------NLMEVPFKENPLLVRGLDYYTR 263

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E         +  K     +V  GGRYD LV +  G   PA GF++GI R+++ ++S
Sbjct: 264 TVFEF--------KSDKLGAQSTVLAGGRYDNLVKQLGGPKTPALGFAMGIDRIMLLIES 315

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                    +     +  +    +   K     + LR  G++AE+      +F  Q+K A
Sbjct: 316 --------PDRKREGVFVVTRGEEGYRKGLELVKFLREKGVKAEIDHRQG-SFKAQMKAA 366

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           DR     A+I G  E     L +K+L  GK+   E
Sbjct: 367 DRCRAKFAVIIGEEELQNDFLSLKELETGKQEKVE 401


>gi|254490108|ref|ZP_05103300.1| histidyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224464696|gb|EEF80953.1| histidyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 418

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 98/473 (20%), Positives = 187/473 (39%), Gaps = 69/473 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
                RG  D   +       +  +++ +   YG+  I  P++E ++   + + +  D  
Sbjct: 4   IIRSIRGMNDLLPEVTPYWQAVEGTMKTVLSGYGYQEIRFPIVEKTELFKRSIGEVTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  ++LR + TA   R   +N   +    R + +GP+FR+E+   GR+R
Sbjct: 64  EKEMYTFDDRNGDSLTLRPEGTAGCVRAAMQNGM-LNQTQRLWYMGPMFRHERPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           QF Q  V+  G S    DAEM MM A   +A+G                 +  R+ L   
Sbjct: 123 QFHQLGVEAYGFSGPDIDAEMIMMTARLWKALGLTGISLQINSLGSTEARLAYREELIQY 182

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E      D+            D   +     +++L  +     + +         E   
Sbjct: 183 FEAHQEQLDE------------DSQRRLHSNPLRILDSKNPEMQALN---------EAAP 221

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++  L  + +                     +   +   + K G    R +I+  +VRG
Sbjct: 222 KLIDHLDAESK--------------------ADFEQLCHTLDKVG---IRYEINPRLVRG 258

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY+  V+E +          +    G+V  GGRYDGLV++  G++  A GF+IG+ RL
Sbjct: 259 LDYYSKTVFEWVT--------DQLGSQGTVCAGGRYDGLVAQLGGKDATAIGFAIGLERL 310

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE--MFLGSSKN 416
           I  L++ ++      E+       +     +  +  +  + LR   + A   +      +
Sbjct: 311 IALLEATDALP----EIAQTDAYLVAVGDAAAIQAPLLAEALRDQ-LPALKLITHCGGGS 365

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           F +Q K ADR      +I G  E +   + +K +A G++ +    +  ++   
Sbjct: 366 FKSQFKRADRSGARWTLILGEEEVNNESIGVKTMATGEQETISWYDLAAYLSQ 418


>gi|88799906|ref|ZP_01115478.1| histidyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88777337|gb|EAR08540.1| histidyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 416

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 96/464 (20%), Positives = 181/464 (39%), Gaps = 68/464 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    +  +   +   ++ +   YG+  +  P++E ++   + + +  D   K +++ 
Sbjct: 1   MNDILPSDSPMWQYLESQVKAVLNQYGYREVRMPIVEVTELFARGVGEHTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +   ++LR + TA   R   ++        R +  GP+FR E+   GR+RQF Q  V
Sbjct: 61  RDRNDDSLTLRPEGTAGCVRAALQHGLLHNQVQRLWYQGPMFRYERPQKGRYRQFYQIGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDGILEKIGL 184
           +  G +    DAE+ ++       +GI                    RK L   LE +  
Sbjct: 121 ETFGMAGADIDAELILLTHRLFRQLGISDSLTLHLNTLGSAEARSRYRKALVDYLEGVKD 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D+            D   +  +  +++L  +  +  +                   ++
Sbjct: 181 QLDE------------DSQRRLYVNPLRILDSKSASTQA---------LLNDAPRFEDYI 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + +    EL  L+                               ++  +VRGL+YYT 
Sbjct: 220 DNESKAHFEELCRLLDENGL-----------------------PYVVNPRLVRGLDYYTK 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +               G+V GGGRYDGLV    G+  PA+GF++G+ RL++ L++
Sbjct: 257 TVFEWMT--------DALGAQGTVCGGGRYDGLVPMLGGKETPASGFAMGMERLLLLLQT 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKNFGNQLK 422
           L+    +I     V +  +     +  K     + +RT   G+R ++  G   +F +Q+K
Sbjct: 309 LDVIPESI--YQTVDVYLVAAGELATRKAMALAEQVRTDCEGVRLQLNCGGG-SFKSQMK 365

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNES 465
            AD+     A+I G  E +   +QIKDL    ++ S        
Sbjct: 366 KADKSGARFALILGDDEAAESRVQIKDLQGNHEQQSVSWAEVAE 409


>gi|329123605|ref|ZP_08252165.1| histidine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327469804|gb|EGF15269.1| histidine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 423

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 101/475 (21%), Positives = 191/475 (40%), Gaps = 56/475 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ M+     +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIMLTYRLWKALGI---DQHVTLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E    L + ++ ++     +++L  +                 +    
Sbjct: 173 RANYRSALVGFLENHQDLMSDEEKERLVRNPLRILDTKN---------PELQKVLDNAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +      +L  L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDDESRAHFEQLCSLLDA-----------------------VGIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G   P+ GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     N+     V I  +     +        + +R+    +   M   S  NF
Sbjct: 313 LLVQEVN---PNVPAKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNT-MLHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARV 471
             Q K AD+    LA++ G  E    ++ +K L  G  + + ++ N   + + + 
Sbjct: 369 KKQFKRADKSGATLALVIGESEVQNKLVVVKHLQGGADQQTLDLVNVIDYIQTQF 423


>gi|77408139|ref|ZP_00784885.1| histidyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77173239|gb|EAO76362.1| histidyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 426

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 103/475 (21%), Positives = 186/475 (39%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      + + IRN+++ Y +D I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGESAKWQYVENVIRNLFKQYHYDEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPTKMYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR R+F Q  V+  GS+  T D E   M     E +GIK    H+       +R+     
Sbjct: 121 GRLREFHQVGVECFGSNNPTTDVETIAMGHHLFEDLGIKNVKLHLNSLGSPESRQAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        ++L++        D   +     +++L  +   D          L  E   
Sbjct: 181 LIDYLTPIREQLSK--------DSQRRLNENPLRVLDSKEPEDK---------LAVENAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L    +     +  ++                          +    I + +VRG
Sbjct: 224 SILDYLDESSQAHFDAVCHMLDAL-----------------------NIPYIIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I                ++  GGRYDGLVS F G   PA GF +G+ RL
Sbjct: 261 LDYYNHTIFEFITEIEDNE--------LTICAGGRYDGLVSYFGGPETPAFGFGLGLERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L      +  I+    + I  +  +++         Q +R  G + E      +   
Sbjct: 313 LLILDKQGI-SLPIENTIDLYIAVLGSEANL--AALDLAQSIRHQGFKVERDY-LGRKIK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD  N  + +  G+ E     + +K+    +E+    +N ++   + + Q
Sbjct: 369 AQFKSADTFNAKVIMTLGSSEVDSKEVGLKNNQTRQEVKVSFENIKTDFSSVLKQ 423


>gi|322515410|ref|ZP_08068402.1| histidine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322118565|gb|EFX90797.1| histidine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 423

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 107/492 (21%), Positives = 193/492 (39%), Gaps = 72/492 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I + +RN+   YG+  +  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDCSPTESPLWQWIENKVRNVLAGYGYSEVRMPIVESTPLFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E         R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIERGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+ ++ A   + +GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEIFGIPNPEVDAELIILTARLWKELGI---DQHVSLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                    K     I L + ++ D+     +++L  + +                    
Sbjct: 173 RANYRSTLVKFLGNHIALMSDEEKDRLVKNPLRILDTKNQA---------LQEVLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  D  +   +L  L+                              +++  +VRGL
Sbjct: 224 LLDYLDDDSREHFAQLCSLLDA-----------------------MGIAYEVNPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGSQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +    +  K    V +  +     +        + +RT    +R  M   S  NF
Sbjct: 313 LLVQEVNKEISLPKA---VDVYVVYSGEGATLNAFRIAEQIRTELPQLRV-MTHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q K AD+    +A++ G  E +   + +KDL  G E                 QITI 
Sbjct: 369 KKQFKRADKVEAQIALVIGESEVAEQKVVVKDLQSGAE-----------------QITIA 411

Query: 478 ISELVSTVKKIL 489
             +++S + K  
Sbjct: 412 QVDIISELTKRF 423


>gi|296136231|ref|YP_003643473.1| histidyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295796353|gb|ADG31143.1| histidyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 425

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 97/484 (20%), Positives = 188/484 (38%), Gaps = 64/484 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    +        + +R +  +YG+  + TP+LEY+    + + +  D  
Sbjct: 4   KLSAVKGMNDIVPPKSAAWEWFEEQVRALMGSYGYQNLRTPILEYTPLFVRGIGEVTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G+ ++LR + TA + R   E+        R +  GP+FR+E+   GR+
Sbjct: 64  EKEMYSFTDALNGEPLTLRPEGTAAVVRACIEHSLLYDGGKRLWYTGPMFRHERPQRGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +G +    D E+ +M       +G+              L  +       
Sbjct: 124 RQFHQVGAEALGFAGPDVDVELILMARQLWARLGLSE------------LVTLEINCLGQ 171

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D++   R+ ++  +++      +  +  L                   E    ++ +L 
Sbjct: 172 ADERARHRVALIAYLEQHIDQLDEDARRRLHSNPLRVLDSKNPAMQALVEGAPKLIDYL- 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                              GE        +  L+R +G +     ++  +VRGL+YY   
Sbjct: 231 -------------------GEASLAHFEGVQALLRAAGQS---FTLNPRLVRGLDYYNLT 268

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +     +V  GGRYDGL+ +  G+  PA G+++G+ R++  L   
Sbjct: 269 VFEWVT--------DRLGAQATVCAGGRYDGLIEQIGGKRTPACGWALGMERVLELLIEA 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +              +    + +S+     + LR AG+R ++ +G   +  +Q+K AD
Sbjct: 321 GQNAPVSAPHA----YAVMTSPELMSRVMPLCESLRAAGVRVQLHMGGG-SMKSQMKKAD 375

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                 A++ G  E   G + IKDL  G +                 Q  +P+  L + V
Sbjct: 376 ASGARWALVFGEQELQSGQVGIKDLR-GAQ-------------DAQQQRMLPLEPLQTLV 421

Query: 486 KKIL 489
             +L
Sbjct: 422 CALL 425


>gi|167523004|ref|XP_001745839.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775640|gb|EDQ89263.1| predicted protein [Monosiga brevicollis MX1]
          Length = 571

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 113/483 (23%), Positives = 200/483 (41%), Gaps = 44/483 (9%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K + + P+G  D   +++ +R  +   I  +++ +G   I+TP++E  ++L     ++ 
Sbjct: 118 QKFQLKNPKGMRDYGPEKMAVRELVFKRIVEVFKRHGAVTIDTPVMELKETLTGKYGED- 176

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K ++ L D  G+ ++LRYDLT P ARYVA N    +                   GR
Sbjct: 177 --SKLIYDLADQGGELLALRYDLTVPFARYVAMNSIKQIKRYHIA-RVYRRDQPSVTTGR 233

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F QCD+D  G        +   +   T    G+K  DY + +NNRK+LDGI    G+
Sbjct: 234 YREFYQCDIDIAGQFNGKMMPDAECVKIVTEVLDGLKLGDYVVKVNNRKLLDGIFAVCGV 293

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                      +  A+DKLDK     VK  + +              L +E  D +  ++
Sbjct: 294 PEAS----FRAICSAVDKLDKQPWNEVKAEMVDE-----------KGLPAESADRIGEYV 338

Query: 245 SIDLEKSMH------------ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
            +      +            +  E +      ++G +E+  + +  R      +R+   
Sbjct: 339 QLRAGTGANFSMPNADLIARLKSIEELYANPMAKEGIDEMEKLLDYCRMMNC-EHRVSFD 397

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATG 350
            ++ RGL+YYTG +YEA+               GSV GGGRYD L  +   KG+ VP  G
Sbjct: 398 CSLARGLDYYTGVIYEAVFVGK---------RVGSVAGGGRYDNLVGMFDAKGRKVPCVG 448

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            S+G+ RL   ++                +           +   Y   L  A I A   
Sbjct: 449 VSLGVERLFTIMEEQAKEAGETFRETATQVLVASGQG-MDKERLRYCTRLWEAQIGAVTS 507

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                   +Q +  +    PL ++ G  E  RG+++++ ++  +E+       E+   A+
Sbjct: 508 FKLKPRLLDQFQQCETEQIPLCLVLGPDELERGVVKLRVMSTREEIEVPDAEMEAVVRAK 567

Query: 471 VAQ 473
           +A+
Sbjct: 568 LAE 570


>gi|328770012|gb|EGF80054.1| hypothetical protein BATDEDRAFT_11516 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 532

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 126/505 (24%), Positives = 219/505 (43%), Gaps = 52/505 (10%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K   ++P+G  D   KE+ IR R+ + I  I+  +G   I+TP+ E  + L     ++ 
Sbjct: 61  KKYTLKVPKGTKDYSDKEMAIRERMFEKITAIFRRHGAVTIDTPVFELREILSGKYGED- 119

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K ++ LQD  G+  SLRYDLT P AR++A N +   F                  GR
Sbjct: 120 --SKLIYDLQDQGGEICSLRYDLTVPFARFLAMNREHQNFKRYHIAKVYRRDQPSVNKGR 177

Query: 125 FRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
            R+F QCD D          DAE   +M + LE++     ++ + +++RKILDG+    G
Sbjct: 178 MREFYQCDFDIAGVYDPMIPDAEAIRVMVEILESL--SIGNFSVKMSHRKILDGMFAVCG 235

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  D    +   +  A+DKLDK     V+            + T    L     D +  +
Sbjct: 236 VPAD----KTRAISSAVDKLDKMSWNDVRK-----------EMTTEKGLDGAVADRIGEY 280

Query: 244 LSIDLEKSMHELYE---LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +   K +  + E    +    +  +G +++ ++   +   G  ++++    ++ RGL+
Sbjct: 281 VKLKGGKELCAILESDSQLSQNKSAMEGVHDMALLFSYLELFGV-ADKVVFDLSLARGLD 339

Query: 301 YYTGCVYEAILGFPVMN-------------EKQKPVVFGSVGGGGRYDGLVSRFKG-QNV 346
           YYTG +YEA+L     N              K +    GS+  GGRYD LV  F G + +
Sbjct: 340 YYTGIIYEAVLLGSDGNFLQFTIISVLVVYPKIETSGVGSIAAGGRYDDLVGMFSGGKKI 399

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG+ R+   L   E+ +        V +  +      L +     + L   GI+
Sbjct: 400 PCVGVSIGVERVFAILLQKEALSKVKSTHTQVYVIGIGG---LLHERMAIVRELWDQGIK 456

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE     +     Q    +R   PLAII G+ E S+ +++IKD+   +            
Sbjct: 457 AEFMFKVNPKLPAQWTACEREQIPLAIIIGSEEISQKIVKIKDMRVKE----------VS 506

Query: 467 REARVAQITIPISELVSTVKKILQE 491
                 ++ +  S+++  +K+ L+ 
Sbjct: 507 VTEAKKEVIVSRSDMIQVLKEKLES 531


>gi|294496132|ref|YP_003542625.1| histidyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292667131|gb|ADE36980.1| histidyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 413

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 104/462 (22%), Positives = 186/462 (40%), Gaps = 55/462 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++   PRG  D   +  R+R  + + +R++   +G+  I TP  E  +       +    
Sbjct: 1   MKISRPRGTRDFLPENTRLRRFVENRMRDVVSRWGYHEIITPTFENLELFTLKSGEG--V 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +++  D   + ++LR +LTAP+ R           P + +     FR E+   GRFR
Sbjct: 59  TGEIYNFSDKGDRELALRPELTAPVMRMYVNEMQATPRPLKLFYFENCFRYERPQKGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +GSS   ADAE+  +  + +E+VGIK +        R    GI+  I    
Sbjct: 119 EFWQFGVETIGSSRPDADAEVIALAEEMIESVGIKGD-------LRVGHLGIIRHILKEL 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + +  ++  ++R +DK D  GL                D+ +  N + E  + +   +SI
Sbjct: 172 EAE--QQTKIMRLVDKKDDTGLD---------------DYLEQINASIELRNELFELVSI 214

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             E ++ +  ++V           EL    EL +     +    +   I RGL+YYTG V
Sbjct: 215 TGEDAIEKARQIVGD-------IEELHKFEELTQILDAYNVEYSMDFGIARGLDYYTGMV 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E                   + GGG Y  L+  F G +VP+TGF +G  R++   +   
Sbjct: 268 FEIY--------ASNLGAQNQICGGGSY-QLIHLFGGGDVPSTGFGLGFDRIMEICELEP 318

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG-SSKNFGNQLKYAD 425
                           +    D+        + LR    +  ++L    +NF  QL +A+
Sbjct: 319 EQKKE---------VVLVATDDTRLDAIGIARELRR---KVPVYLDIMKRNFKGQLSHAN 366

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
                  +I G  E   G + +KD+  G++    ++      
Sbjct: 367 NIGARYVVIVGKREMEAGKVTLKDMGSGEQHQLTVEEAREHI 408


>gi|188991488|ref|YP_001903498.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167733248|emb|CAP51446.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 504

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 144/512 (28%), Positives = 231/512 (45%), Gaps = 71/512 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 29  IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 88

Query: 66  PNKGVFSLQDDDGQ------------------WISLRYDLTAPLARYVAENFDTIVFPCR 107
               V+      G                    ++LR+DLT PLARYVAE+   + FP R
Sbjct: 89  ---QVY-FVQSTGALANAAAAADEGAESGGLPELALRFDLTVPLARYVAEHEHELSFPFR 144

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   ++ +
Sbjct: 145 RYQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGEFKV 204

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +NNRK+L G  E +G+   +    +L VLR +DK+DK G + V+  L            
Sbjct: 205 QLNNRKLLRGFFESLGVAEGE---LQLAVLREVDKIDKRGAEYVRDTLT----------G 251

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRK 281
           +G  + + Q+D +++F+++        L +L      V  +    +G  EL  + ELV+ 
Sbjct: 252 EGFGIAAAQVDKILAFVAVRSNGHADALAQLQALETSVGASATLGEGIAELREVLELVKA 311

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            G       ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S +
Sbjct: 312 LGVPETAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYENLASHY 363

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
               +P  G SIG++RL   L+         +     ++  M  D   L       + LR
Sbjct: 364 TKSKLPGVGISIGLTRLFWQLREAGLIAGIAESSVHAMVALM--DESRLDDALDIARRLR 421

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             GI  E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL   ++      
Sbjct: 422 IGGINTEVQM-EPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ------ 473

Query: 462 NNESWREARVAQITIPISELVSTVKKILQENK 493
                      Q  +   EL ST++  L++ K
Sbjct: 474 -----------QFDVARDELASTLQVELEQAK 494


>gi|292655989|ref|YP_003535886.1| histidyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291370647|gb|ADE02874.1| histidyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 431

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 113/457 (24%), Positives = 184/457 (40%), Gaps = 38/457 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF D    E+  R  ++D++      YGF  I TP LE +        +E    + +++
Sbjct: 6   KGFRDFYPGEMSARREVVDTVETAAARYGFREIGTPHLERTQMYVDKSGEEIV--EELYA 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +D  G+ ++L  +LT  +AR V      +  P +     P +R E+   GRFR+F Q +
Sbjct: 64  FEDKGGREVALTPELTPTVARMVVAKQQALSKPIKWVSTRPFWRYEQVQQGRFREFYQTN 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
            D  GSS   ADAE+    AD L  +G+  +D+   +++R IL G+L    +  D     
Sbjct: 124 ADIFGSSEPEADAEILAFCADALTDLGLTADDFEFRVSHRDILGGLLRSFDVDVDVADAV 183

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R +                     +            A L+ +Q D     +       +
Sbjct: 184 RAVDKS-----------------EKVERAEYLGLLSDAGLSYDQADEFADLIERGDLDEI 226

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                   G    E     L  +       G      ++S +  RGL+YYTG V+E    
Sbjct: 227 AAF-----GGDDVEAAVENLRNVLAAADDFGAGE-FCEVSLSTARGLDYYTGVVFECF-- 278

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                      V  +  GGGRYD L+  F GQ+ PA G  IG + L +  +      +  
Sbjct: 279 ------DSTGDVSRATFGGGRYDDLIESFGGQSTPAVGVGIGGATLQLLCQRAGVWPDEE 332

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 L+T      D+        + LR AG   E+ + S ++FG Q+ YAD  N    
Sbjct: 333 LATDYYLLTV----GDTRGVASDIARDLRAAGNVVEVDV-SDRSFGAQMSYADSVNADTV 387

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +I G  +   G + +KD+A G + +  + +    R+A
Sbjct: 388 VIVGERDLENGEVTVKDMASGDQTTVPVDDFPGDRDA 424


>gi|239815179|ref|YP_002944089.1| histidyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239801756|gb|ACS18823.1| histidyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 440

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 97/472 (20%), Positives = 184/472 (38%), Gaps = 59/472 (12%)

Query: 8   RAELPRGFADCPT---------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           +    +G  D             +  + +    ++R +   YG+  + TP++E +    +
Sbjct: 4   KINAVKGMNDILPASVPRIDRLPDSALWSWFEQTVRGLLARYGYQYMLTPVVEPTALFVR 63

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            L +  D   K ++S  D  +G  ++LR + TA + R + E+      P R + +GP+FR
Sbjct: 64  GLGEVTDIVEKEMYSFTDAMNGDKLTLRPEATAGIVRAMVEHNALYNGPLRLWTMGPMFR 123

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q DV+ +G      DAE+ +M+      +G+   ++     N     
Sbjct: 124 HERPQKGRYRQFHQLDVEALGFPGPDVDAELILMVRALWRELGLAEGEHVRLEINSLGQP 183

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
              +               VL A D   +     +++L  +     +           E 
Sbjct: 184 AERQAHREALIRHFEAHAGVLDA-DAQRRLHSNPLRILDTKNPAMQA---------VVEA 233

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ FL  +       +  ++                              +++  +V
Sbjct: 234 APQLMDFLGEESRAHFDAVRAVLDAAGLA-----------------------YRVNPRLV 270

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RG++YY   V+E +          +    G+V GGGRYDGL+ +  G+  PA GF +GI 
Sbjct: 271 RGMDYYNLTVFEWVT--------DQLGSQGTVCGGGRYDGLIGQMGGKPAPAVGFGLGIE 322

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL++    L                 +   + +L +     + LR AG+   +      +
Sbjct: 323 RLLL----LIQELRLPVPAAAPAAYAIVPSAAALPQVMAVLEQLRAAGVSV-LQHAGGGS 377

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK--GKELSREIKNNESW 466
              Q K AD      A++ G  E SRG + +K L +  G++++R +    +W
Sbjct: 378 MKAQFKKADASGARYALVFGEDELSRGEVTVKSLREGGGEQVARPLAEVATW 429


>gi|297832910|ref|XP_002884337.1| hypothetical protein ARALYDRAFT_477518 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330177|gb|EFH60596.1| hypothetical protein ARALYDRAFT_477518 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 484

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 127/495 (25%), Positives = 216/495 (43%), Gaps = 53/495 (10%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
             + +   +LP+G  D   +++ +R +    I+N+++ +G   ++TP+ E  ++L     
Sbjct: 38  SNENRRLPKLPKGTRDFAKEQMAVREKAFSIIQNVFKRHGATALDTPVFELRETLMGKYG 97

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           ++   +K V+ + D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +   
Sbjct: 98  ED---SKLVYDIADQGGELCSLRYDLTVPFARYVAMNG---ITSFKRYQIAKVYRRDNPS 151

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G           + +   L    ++  DY + +N+RK+LDG+LE 
Sbjct: 152 KGRYREFYQCDFDIAGLFEPMGPDFEIVKILTELLD-ELEIGDYEVKLNHRKLLDGMLEI 210

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  +    +   +  +IDKLDK   + VK  + E              L+SE  D + 
Sbjct: 211 CGVPPE----KFRTICSSIDKLDKQSFEQVKKEMVEE-----------KGLSSEIADRIG 255

Query: 242 SFLSIDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +F+            + +         +  +  +EL ++ E + +S   S+RI    ++ 
Sbjct: 256 NFVKEKGAPLELLSKLRQEGSEFLDNQSSREALDELSIMFEALERSKC-SHRIVFDLSLA 314

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYTG ++EA+               GS+G GGRYD L+  F  + VPA G S+GI 
Sbjct: 315 RGLDYYTGVIFEAVC---------IGAEVGSIGAGGRYDNLIGMFGTKQVPAVGMSLGIE 365

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++ L      +       +       + L++       L  A I AE +L S + 
Sbjct: 366 RVFNIMEELNEKQKQVIRPTETQVLVSIMVDNKLAEAAGLVSQLWDAKINAE-YLVSKRK 424

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                  A     P  ++ G  E S G + +K L KG E   +               T 
Sbjct: 425 -EKHFNRAKESGIPWMVMVGEKELSGGFVTLKKLEKGSEEKED--------------QTC 469

Query: 477 PISELVSTVKKILQE 491
                V  + K+L  
Sbjct: 470 SRDSFVGELLKLLSC 484


>gi|77414026|ref|ZP_00790197.1| histidyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159908|gb|EAO71048.1| histidyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 426

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 101/471 (21%), Positives = 184/471 (39%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      + + IRN+++ Y +D I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGESAKWQYVENVIRNLFKQYHYDEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPTKMYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQVGVECFGSNNPATDVETIAMGHHLFEDLGIKNVKLHLNSLGNPESRQAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + E+L    + D   +     +++L  +   D          L  E    ++ 
Sbjct: 181 LIDYLTPIREQL----SKDSQRRLNENPLRVLDSKEPEDK---------LAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L    +     +  ++                          +    I + +VRGL+YY
Sbjct: 228 YLDESSQAHFDAVCHMLDAL-----------------------NIPYIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  ++E I                ++  GGRYDGLVS F G   PA GF +G+ RL++ L
Sbjct: 265 SHTIFEFITEIEDNE--------LTICAGGRYDGLVSYFGGPETPAFGFGLGLERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                 +  I+    + I  +  +++         Q +R  G + E      +    Q K
Sbjct: 317 DKQGI-SLPIENTIDLYIAVLGSEANL--AALDLAQSIRHQGFKVERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD  N  + +  G+ E     + +K+    +E+    +N ++   + + Q
Sbjct: 373 SADTFNAKVIMTLGSSEVDSKEVGLKNNQTRQEVKVSFENIKTDFSSVLKQ 423


>gi|226946066|ref|YP_002801139.1| histidyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511938|sp|C1DE56|SYH_AZOVD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226720993|gb|ACO80164.1| histidyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 428

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 99/479 (20%), Positives = 186/479 (38%), Gaps = 73/479 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      S+  + + YG+  I  P++E+++   + +
Sbjct: 1   MSKN----IQAIRGMNDILPEQTPLWRYFEKSVAGLLDGYGYRQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++ +D +G  ++LR + TA   R V E+  +      + + +GP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASCVRAVLEHGISGGGQVQKLWYVGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ ++       +G++                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLPGPDIDAELIVLTWRLWGLLGLREAVTLELNSLGSSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L       D+            D   +     +++L  +     +      
Sbjct: 177 RYREALVEYLSARFERLDE------------DSQRRLSSNPLRILDSK--NPETQALLVD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A         +  +L  D  +    L   +                              
Sbjct: 223 A-------PKLADYLDEDSRQHFEGLKARLD-----------------------VAGIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY   V+E +          K    G+V  GGRYDGLV +  G+  PA 
Sbjct: 253 VINPKLVRGLDYYGKTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQLGGKPTPAV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++G+ RL++ L++LE     +     V        ++  +      + LR A  G+R 
Sbjct: 305 GFAMGVERLVLLLETLERVPAELSRQVDVYFCAFGEAAELAALGLA--ERLRDALPGLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNES 465
            +  G+  +F +QLK AD+     A++ G  E +  ++ +K L  +G++ S        
Sbjct: 363 AVNAGAG-SFKSQLKKADKSGALYALVLGEDELAGRIVGLKSLRAEGEQQSVGWDELGE 420


>gi|291543722|emb|CBL16831.1| histidyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 435

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 98/459 (21%), Positives = 185/459 (40%), Gaps = 53/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           L  + P G  D     I     +    R++ ++YGF  I  P  E ++   + + +  D 
Sbjct: 3   LNLKRPNGTEDITPANIHKWYTVEQVARSVAQSYGFREIRIPTFENTELFQRSVGETTDV 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K ++++        +LR + TA   R + +N       P + + +   FR+E+   GR
Sbjct: 63  VQKEMYTVMAK-ETKFTLRPEGTAGTIRAMLQNGLLNEALPQKVFYLLSCFRHERPQAGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
            R+F Q  ++  GS+   ADAE+  +    L+ +G+K    Y   I          + + 
Sbjct: 122 LREFHQFGLEMAGSAEPVADAEVISLAKAVLDTLGLKGIQLYINSIGCPTCRAEYHKALR 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            + + + ++          L +     +++L  +                 +   +++ +
Sbjct: 182 AYFEARKDQLCDTC-----LSRLEKNPMRILDCKSPI---------CGELGKDAPVILDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  D +    +L   +K                              I+  IVRGL+YYT
Sbjct: 228 LCEDCKTHFEKLQGYLKA-----------------------MDIDFSINPKIVRGLDYYT 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +               G+V GGGRYDGL+    GQ+ PA GF++GI RL++ ++
Sbjct: 265 KTVFEFVTTD--------IGAQGTVCGGGRYDGLIEELGGQHQPALGFAMGIERLLLTME 316

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           S      +  E     +     D + +S+   Y  +LR  G   E  L   ++F +Q+KY
Sbjct: 317 SQG---CDFLEPNHCDLYIATMDPEGVSRAMQYANLLRQEGFWVEYDL-LGRSFKSQMKY 372

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AD+      ++ G  E + G   +K++  G++    + +
Sbjct: 373 ADKIGTSYLLVLGENELTTGNANLKNMKTGEQTPLLLDD 411


>gi|190150503|ref|YP_001969028.1| histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307263846|ref|ZP_07545451.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|229558640|sp|B3GY63|SYH_ACTP7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189915634|gb|ACE61886.1| histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306870835|gb|EFN02574.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 423

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 104/494 (21%), Positives = 192/494 (38%), Gaps = 76/494 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I + +RN+   YG+  +  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDCSPTESPLWQWIENKVRNVLAGYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E         R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIERGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+ ++ A   + +GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEVFGIPNPEIDAELIILTARLWKELGI---DQHVSLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                    K  E    L + ++ ++     +++L  + +                    
Sbjct: 173 RANYRSALVKFLENHTALMSDEEKERLVKNPLRILDTKNQA---------LQEVLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  D  +    L  L+                              +++  +VRGL
Sbjct: 224 LLDYLDDDSREHFAHLCHLLDA-----------------------MGIAYEVNPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGSQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLGSSK 415
           + ++ +    N  K    V +  +     +        + +R+     G+   M   S  
Sbjct: 313 LLVQEVNKEINLPKA---VDVYVVYSGEGATLNAFQMAERIRSELPQLGV---MTHCSGG 366

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           NF  Q K AD+    +A++ G  E  +  + +KDL  G E                 Q+ 
Sbjct: 367 NFKKQFKRADKVEAQIALVIGESEVEQQTVVLKDLQSGAE-----------------QVI 409

Query: 476 IPISELVSTVKKIL 489
           I  ++L++ + K  
Sbjct: 410 IAQADLIAELTKRF 423


>gi|319746002|gb|EFV98284.1| histidine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 438

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 102/475 (21%), Positives = 185/475 (38%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      + + IRN+++ Y +D I TP+ E+ + + + + D  D 
Sbjct: 13  MKLQKPKGTQDILPGESAKWQYVENVIRNLFKQYHYDEIRTPMFEHYEVISRSVGDTTDI 72

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y IG +FR E+   
Sbjct: 73  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPTKMYYIGSMFRYERPQA 132

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGI 178
           GR R+F Q  V+  GS+    D E   M     E +GIK    H+       +R+     
Sbjct: 133 GRLREFHQVGVECFGSNNPATDVETIAMGHHLFEDLGIKNVKLHLNSLGSPESRQAYRQA 192

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        ++L++        D   +     +++L  +   D          L  E   
Sbjct: 193 LIDYLTPIREQLSK--------DSQRRLNENPLRVLDSKEPEDK---------LAVENAP 235

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L    +     +  ++                          +    I + +VRG
Sbjct: 236 SILDYLDESSQAHFDAVCHMLDAL-----------------------NIPYIIDTNMVRG 272

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I                ++  GGRYDGLVS F G   PA GF +G+ RL
Sbjct: 273 LDYYNHTIFEFITEIEDNE--------LTICAGGRYDGLVSYFGGPETPAFGFGLGLERL 324

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L      +  I+    + I  +  +++         Q +R  G + E      +   
Sbjct: 325 LLILDKQGI-SLPIENTIDLYIAVLGTEANL--AALDLAQSIRHQGFKVERDY-LGRKIK 380

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD  N  + +  G+ E     + +K+    +E+    +N ++   + + Q
Sbjct: 381 AQFKSADTFNAKVIMTLGSSEVDSKEVSLKNNQTRQEVKVSFENIKTDFSSVLKQ 435


>gi|282881885|ref|ZP_06290536.1| histidine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|300813282|ref|ZP_07093639.1| histidine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|281298294|gb|EFA90739.1| histidine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|300512607|gb|EFK39750.1| histidine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 435

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 129/463 (27%), Positives = 212/463 (45%), Gaps = 35/463 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
           + ++     GF +   KE  + N++ D IR  +E  GF PI+TP++E S+ L      E 
Sbjct: 2   SIVKPSTLPGFMELLPKEQILFNQMRDIIRKNFERAGFLPIDTPVIEKSEVLLAKGGGE- 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              K ++         +SLR+DLT PLARY  E+F  + FP + Y IG V+R EK   GR
Sbjct: 61  -TEKQIYRFT-KGDTDMSLRFDLTVPLARYTVEHFSELSFPFKRYAIGKVYRGEKAQKGR 118

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           FR+F QCD+D +G+   +   +    +        +  +D+ I +NNR+IL G    +G+
Sbjct: 119 FREFYQCDIDTIGNGELSIANDAEFPVVIYHTFKDLGFSDFTIHLNNRRILKGFFAWLGV 178

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                       LRA+DK++K G + V   L E              +  E+   ++ F+
Sbjct: 179 SDSQNA------LRAVDKIEKIGPENVLKELEES------------GIDREKGKKILEFI 220

Query: 245 SIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            I    ++ +  L +L        +G +E+  +   ++    +    +I   I RGL+YY
Sbjct: 221 EIKGTNDEIIQALKDLNIDEETFNQGLDEMSELISCIKAYNIDEKNYRIDLKIARGLDYY 280

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG VYE  L              GSV  GGRYD L S +  + +P  G SIG+SRL   L
Sbjct: 281 TGTVYETTLDDYPK--------IGSVCSGGRYDNLASYYTEKTLPGVGISIGLSRLFYQL 332

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +  +   K +  ++I  MD     + +       LR   ++  ++       G + K
Sbjct: 333 EQAKIISAEDKSLIDIIILPMDG---FIHEGIKLLAKLREKNVKVTIY-SEDAKLGKKFK 388

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           YAD+   P AI+ G  E   G+  ++++A G++   +      
Sbjct: 389 YADQIKVPYAIVLGENEVKNGLYSLRNMATGEQEEVDFNKLVE 431


>gi|22538242|ref|NP_689093.1| histidyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25012099|ref|NP_736494.1| histidyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76798538|ref|ZP_00780771.1| histidyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|54039672|sp|P67486|SYH_STRA5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|54042035|sp|P67485|SYH_STRA3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|22535155|gb|AAN00966.1|AE014287_6 histidyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|24413643|emb|CAD47720.1| histidyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76586102|gb|EAO62627.1| histidyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 426

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 101/471 (21%), Positives = 183/471 (38%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      + + IRN+++ Y +D I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGESAKWQYVENVIRNLFKQYHYDEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN           + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPTKMYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQVGVECFGSNNPATDVETIAMGHHLFEDLGIKNVKLHLNSLGNPESRQAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + E+L    + D   +     +++L  +   D          L  E    ++ 
Sbjct: 181 LIDYLTPIREQL----SKDSQRRLNENPLRVLDSKEPEDK---------LAVENAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L    +     +  ++                          +    I + +VRGL+YY
Sbjct: 228 YLDESSQAHFDAVCHMLDAL-----------------------NIPYIIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I                ++  GGRYDGLVS F G   PA GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEIEDNE--------LTICAGGRYDGLVSYFGGPETPAFGFGLGLERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                 +  I+    + I  +  +++         Q +R  G + E      +    Q K
Sbjct: 317 DKQGI-SLPIENTIDLYIAVLGSEANL--AALDLAQSIRHQGFKVERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD  N  + +  G+ E     + +K+    +E+    +N ++   + + Q
Sbjct: 373 SADTFNAKVIMTLGSSEVDSKEVGLKNNQTRQEVKVSFENIKTDFSSVLKQ 423


>gi|145219504|ref|YP_001130213.1| histidyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|189082304|sp|A4SE02|SYH_PROVI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|145205668|gb|ABP36711.1| histidyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 426

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 97/470 (20%), Positives = 179/470 (38%), Gaps = 59/470 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
           + +  +G  D    E      +   +R +   Y F  + TP+ EY++   + +    D  
Sbjct: 3   QYQAVKGTKDVFPDEAVQWQLVEGVVRRLAGLYAFGEVRTPVFEYTELFQRGIGATTDIV 62

Query: 67  NKGVFSLQ-DDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            K +FS   D  G+ ++LR ++TA + R   + N  +     + + I  +FR E+   GR
Sbjct: 63  GKEMFSFLPDPQGRSLTLRPEMTAGVMRAALQRNLLSQAPLHKLFYISDLFRKERPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILE 180
            RQF Q   + +G+S+  A AE+   M    +A+G+K     I       +R      L 
Sbjct: 123 QRQFTQFGAELLGASSPAAVAEVLSFMMGVFDALGLKGLRLRINTLGDLEDRARYRDALR 182

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              L   D+L          D+  K  L+   L + + +     +    A         +
Sbjct: 183 AYFLPFADEL----------DESSKERLEKNPLRILDSKNPALKELIAAA-------PRL 225

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             F+  +      E+  L++                             ++   +VRGL+
Sbjct: 226 FDFVKAEGVAEFEEVLSLLRD-----------------------RGVSYEVDHLLVRGLD 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLI 359
           YY    +E            +     ++GGGGRYDGL      G+++PA GF++G+ RL+
Sbjct: 263 YYCHTAFEVT--------SSELGAQDAIGGGGRYDGLARELGGGKDMPAVGFAVGMERLL 314

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +A++              V +       +           LR AGI  E+ L + ++   
Sbjct: 315 IAMEKQGLLEGLKPVGPKVFVVV--QQLELSGHAMQVAFQLRRAGISTELDL-AGRSMKA 371

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           Q++ A+R     A+  G  E   G   +K+L   ++ +  + +       
Sbjct: 372 QMREANRLGAAYALFIGQTEFESGQYGLKNLVSSEQSTLTLDSITETLRE 421


>gi|296116157|ref|ZP_06834775.1| histidyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977263|gb|EFG84023.1| histidyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 417

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 113/467 (24%), Positives = 196/467 (41%), Gaps = 64/467 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D   +  R    ++++ R I   YGFD   TP+ E +    + L D  D  +
Sbjct: 4   LQPVRGTHDLIGETQRRFAHVIETARRITGLYGFDEWATPIFEDTRVFKRTLGDTSDVVS 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++ +D  G+ ++LR + TA + R +  N  T   P + +  GP+FR E+   GR+RQ
Sbjct: 64  KEMYTFEDRGGESLTLRPEGTASVCRALVTNGLTQSLPQKVFYAGPMFRYERPQKGRYRQ 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKI 182
           F Q   + +G +   ADAE+  M  D L+A+GI R+     +    I +R      L   
Sbjct: 124 FHQIGAELLGPAEPLADAEVIAMGRDILQALGIARDTVLELNTLGDIESRNAWRAALITY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D+L        + + L++     +++L  +   D        A L S  +     
Sbjct: 184 FSERRDEL--------SSESLNRLERNPLRILDSKSPQDRV--VVGDAPLISGYL----- 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                  +  +++L    +++          + +  IVRGL+YY
Sbjct: 229 -------------------NPQAQAFWDDLRKTLDIL------GVPFRENPRIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +   +E +         ++    G+V  GGRYDGLVS   G   PA G++ GI RL + L
Sbjct: 264 SHTAFEFVT--------ERLGTQGTVLAGGRYDGLVSEMGGPQTPAIGWAGGIERLSMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
               ++           +  +     + +      Q LR A IRAE       N   +++
Sbjct: 316 DEAPAAPRP--------VVVVPMGEGAAATGITVLQALRGAHIRAETSYRG--NLKRRME 365

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            A+R N   AI+ G  E +RG++Q++DL KG++    +     +   
Sbjct: 366 RANRLNATHAIVIGEDEVARGVVQVRDLDKGQQAEVAMDQVTGFLHG 412


>gi|254584430|ref|XP_002497783.1| ZYRO0F13398p [Zygosaccharomyces rouxii]
 gi|238940676|emb|CAR28850.1| ZYRO0F13398p [Zygosaccharomyces rouxii]
          Length = 529

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 129/523 (24%), Positives = 219/523 (41%), Gaps = 66/523 (12%)

Query: 3   KKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           K  KL+   + P+G  D    ++ IR  +  ++ N+++ +G   I+TP+ E  + L    
Sbjct: 31  KSNKLQVSLKTPKGTKDWADSDMVIREAVFGTLSNLFKRHGGVTIDTPVFELKEILAGKY 90

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K ++ L+D  G+  SLRYDLT P ARYVA N    V   + Y I  V+R ++ 
Sbjct: 91  GED---SKLIYDLKDQGGELCSLRYDLTVPFARYVAMNN---VPTIKRYHIAKVYRRDQP 144

Query: 121 GPGRFRQFIQCDVDN-VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              + R       D  +  + E+   +   +        G+   D+ I +N+RKILDGI 
Sbjct: 145 AMTKGRMREFYQCDFDIAGNYESMVPDAECLSILVEGLTGLGIKDFKIKLNHRKILDGIF 204

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +  G+  +D       +  A+DKLDK   + VK            + T     T E  D 
Sbjct: 205 KVSGVKDED----VRKISSAVDKLDKTPWETVKK-----------EITAEKGQTEETADK 249

Query: 240 MVSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +  ++ ++       S+     ++      ++G +E+  +       G +S  I    ++
Sbjct: 250 IGEYVKLNGTLQEIYSILSKDPVLTSNELAKQGLDEIATLMNFTNAFGIDS-YISFDLSL 308

Query: 296 VRGLEYYTGCVYEAIL--------------GFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            RGL+YYTG +YEA+                    ++    V  GS+  GGRYD LV+ F
Sbjct: 309 ARGLDYYTGLIYEAVTAASAPPEEAAELKKKAKSEDDASAYVGVGSIAAGGRYDNLVNMF 368

Query: 342 KG------QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD---SLSK 392
                     +P  G S G+ R+   +K   SS +       V +       D    L +
Sbjct: 369 SQASGRKSNQIPCVGISFGVERIFSLIKQRTSSADIKPTATQVFVMAFGGGKDWTGYLPE 428

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + L  AGI  E    S  N   Q + A++   PLA+I G  E   G L++K L  
Sbjct: 429 RMKVAKQLWNAGIEVEYVYKSKANPRKQFESAEKSGAPLAVILGKEEYLEGKLRVKRL-- 486

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           G+E + +  +             +   ++V  VK+ L    ++
Sbjct: 487 GQEFANDDGDL------------VNAEDIVDAVKEKLSSVHKD 517


>gi|53729067|ref|ZP_00134163.2| COG0124: Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|303250075|ref|ZP_07336277.1| histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307246091|ref|ZP_07528173.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307252816|ref|ZP_07534706.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307255072|ref|ZP_07536890.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307257231|ref|ZP_07539002.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307259509|ref|ZP_07541234.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307261658|ref|ZP_07543325.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|302651138|gb|EFL81292.1| histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306853026|gb|EFM85249.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306859715|gb|EFM91738.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306861945|gb|EFM93921.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306864273|gb|EFM96185.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306866445|gb|EFM98308.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868650|gb|EFN00460.1| Histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 423

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 104/494 (21%), Positives = 192/494 (38%), Gaps = 76/494 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I + +RN+   YG+  +  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDCSPTESPLWQWIENKVRNVLAGYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E         R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIERGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G      DAE+ ++ A   + +GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEVFGIPNPEIDAELIILTARLWKELGI---DQHVSLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                    K  E    L + ++ ++     +++L  + +                    
Sbjct: 173 RANYRSALVKFLENHTALMSDEEKERLVKNPLRILDTKNQA---------LQEVLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  D  +    L  L+                              +++  +VRGL
Sbjct: 224 LLDYLDDDSREHFAHLCHLLDA-----------------------MGITYEVNPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGSQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLGSSK 415
           + ++ +    N  K    V +  +     +        + +R+     G+   M   S  
Sbjct: 313 LLVQEVNKEINLPKA---VDVYVVYSGEGATLNAFQMAERIRSELPQLGV---MTHCSGG 366

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           NF  Q K AD+    +A++ G  E  +  + +KDL  G E                 Q+ 
Sbjct: 367 NFKKQFKRADKVEAQIALVIGESEVEQQTVVLKDLQSGAE-----------------QVI 409

Query: 476 IPISELVSTVKKIL 489
           I  ++L++ + K  
Sbjct: 410 IAQADLIAELTKRF 423


>gi|108804179|ref|YP_644116.1| histidyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123177396|sp|Q1AWC4|SYH_RUBXD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|108765422|gb|ABG04304.1| histidyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 424

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 94/464 (20%), Positives = 179/464 (38%), Gaps = 63/464 (13%)

Query: 7   LRAELPRGFADCPTKEIR---------IRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +    P+G  D    +           + +R+ D+ R+++  YG+  + TP+ E ++   
Sbjct: 1   MSYRRPKGTYDVYPGDAARQEPHERPDLWDRLYDAARDLFRRYGYAEVRTPVFEEAELFV 60

Query: 58  KFLPDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVF 115
           +   +  D   K +F  +D  G+ ++LR + TA + R   E+    +  P + +  GP+F
Sbjct: 61  RSTGETSDIVRKEMFVFRDKAGRELALRPEGTAGVVRAYVEHGLYKLAQPVKMWYFGPMF 120

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R+E+   GR+RQ  Q   + +GS     D E+  ++     + G++    H+        
Sbjct: 121 RHERQQKGRYRQHTQIGAEVLGSGDPLVDVEVVALLYAIHRSAGVREEVIHLNNL----- 175

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
            G +E    +  +           +D      ++   L   + +  N+    + A L  E
Sbjct: 176 -GDVETRRRYVPELRAFLERHRSELDPDSVARIETNPLRTFDSKDPNTRAVLREAPLIGE 234

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            +                            E+    L  + E +   G           +
Sbjct: 235 YLS---------------------------EEAAAHLRAVEEGLEALGIP---YVRDERL 264

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YYT  V+EA        +        +VG GGRY+ LV    G +VP  GF  G+
Sbjct: 265 VRGLDYYTSTVFEA--------KSPVLGAQDTVGAGGRYNRLVEELGGPDVPGIGFGTGV 316

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R+++A ++ E           +    +    ++        + LR  G+  E+   + +
Sbjct: 317 ERVLLAARAAE-------PESALDAFFVTLSPEARLPALQLAEALRAEGLSCELDY-AGR 368

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           +   Q + ADR     A++ G  E S G   ++D+  G+E    
Sbjct: 369 SPKGQFRQADRSGASYAVVLGEEELSGGFCTLRDMKSGEERRVS 412


>gi|224068279|ref|XP_002191200.1| PREDICTED: histidyl-tRNA synthetase [Taeniopygia guttata]
          Length = 441

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 118/466 (25%), Positives = 208/466 (44%), Gaps = 44/466 (9%)

Query: 30  LDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTA 89
           L+ +++ ++ +G   I+TP+LE  ++L     ++   +K ++ LQD  G+ ++LRYDLT 
Sbjct: 14  LEHVQSYFKRHGAAAIDTPVLELRETLLGKYGEQ---SKLIYELQDQGGELLALRYDLTV 70

Query: 90  PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCM 149
           P ARY+A N    +             N     GR+R+F QCD D  G          C+
Sbjct: 71  PFARYLAMNKIKKMKRYHVA-KVYRRDNPATTRGRYREFYQCDFDIAGQFDPMIPDAECL 129

Query: 150 MMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQ 209
            +   + +  ++  D+ I +N+R+IL+G+    G+       + +     +DKLDK   +
Sbjct: 130 KIVHEILS-DLQLGDFVIKVNDRRILNGVFAVCGVPES----KLIPACSTVDKLDKVPWE 184

Query: 210 GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL---YELVKGTIAGE 266
            V+            +      L+ E  D +  ++ +     + E       +      +
Sbjct: 185 EVR-----------SEMVGEKGLSPEAADRIGEYVQLHGGLDLIEQLLQDPKLSQNKVAK 233

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
           +G  ++ ++ E +   G    +I    ++ RGL+YYTG ++EA+L        ++PV  G
Sbjct: 234 EGLGDMKLLFEYLTLFGIT-GKISFDLSLARGLDYYTGVIFEAVLLQQENEHVEEPVSVG 292

Query: 327 SVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
           SV GGGRYDGLV  F    + VP  G SIGI R+   L+    ++          +    
Sbjct: 293 SVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSILEQRLEASGEKLRTTETQVLVAT 352

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
                L+        L  AGI+AEM          QL+Y +    PLA I G  E + G+
Sbjct: 353 PQKHLLAARMKLISELWDAGIKAEMLYKKDPKLLKQLQYCEDTGIPLAAIVGEQELADGV 412

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           ++++D+A  KE++                  IP  +L+  +++ L+
Sbjct: 413 VKLRDVATRKEVA------------------IPREKLIDEIRRRLE 440


>gi|241956163|ref|XP_002420802.1| histidine--trna ligase, putative; histidyl-tRNA synthetase,
           mitochondrial precursor, putative [Candida dubliniensis
           CD36]
 gi|223644144|emb|CAX41887.1| histidine--trna ligase, putative [Candida dubliniensis CD36]
          Length = 541

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 132/510 (25%), Positives = 220/510 (43%), Gaps = 49/510 (9%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K      + P+G  D   K++ +R  I  ++ ++++ +G   I+TP+ E  + L     +
Sbjct: 57  KAQDFVLKTPKGTKDWADKDMVLREAIFGTLSSLFKKHGGVTIDTPVFELREILTGKYGE 116

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +   +K +++L+D  G+  SLRYDLT P AR+VA N    +                   
Sbjct: 117 D---SKLIYNLEDQGGELTSLRYDLTVPFARFVACNNIAAIKRYHIA-KVYRRDQPAMTK 172

Query: 123 GRFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           GR R+F QCD D  G+        E+  ++ D L  +GI   D+ + +N+RKILDGI + 
Sbjct: 173 GRMREFYQCDFDIAGNYDTMVPDSEILALLCDGLNGLGIT--DFKVKLNHRKILDGIFQA 230

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  +D       V  A+DKLDK   + VK            +     N   E  D + 
Sbjct: 231 CGVKDED----VRKVSSAVDKLDKSPWEVVKK-----------EMVVEKNQPPEVADKIG 275

Query: 242 SFLSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
            F+  +          +  +++K   + + G  E+ ++++ V         +    ++ R
Sbjct: 276 EFVKHNGSIREVLEFLQASDILKSNDSAQSGIAEMSILADYVDAFDIGE-YLSFDLSLAR 334

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKP-------------VVFGSVGGGGRYDGLVSRFKG- 343
           GL+YYTG +YEA+                         V  GS+  GGRYD LV  F   
Sbjct: 335 GLDYYTGLIYEAVTAASAPPANATELKAKSNDEDASAYVGVGSIAAGGRYDNLVGMFSNG 394

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYTQML 400
           +++P  G S G+ RL   +K+    T+       V +            L +    T  L
Sbjct: 395 KSIPCVGVSFGVERLFSIIKNRTDLTSISANHTDVFVMAFGGGEGWNGFLKERMEITNTL 454

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
             AGI AE    S  N   Q   A++    LA+I G  E  +G L+IK L +G+E   E+
Sbjct: 455 WKAGINAEYLYKSKANIRKQFDAAEKAGAKLAVILGKEEYPQGQLRIKVLGQGQENEGEL 514

Query: 461 KNNESWREARVAQITIPISELVSTVKKILQ 490
            N +   +A  + +T      V ++ +I++
Sbjct: 515 VNKKELIDAVQSHLTD-----VDSISRIIK 539


>gi|315444723|ref|YP_004077602.1| histidyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315263026|gb|ADT99767.1| histidyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 420

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 91/472 (19%), Positives = 181/472 (38%), Gaps = 68/472 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + P+G  D    +      +   +       G+  IE P+ E +    + + +  D  +
Sbjct: 5   FKAPKGVPDYFPPDSAEFVAVRSGLLTAARRAGYGDIELPIFEDTALFARGVGESTDVVS 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+R
Sbjct: 65  KEMYTFADRGERSVTLRPEGTAGVMRAVIEHGLDRGQLPVKLCYSGPFFRYERPQAGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  ++ +G      DAE+  +      ++G            D       R++L   
Sbjct: 125 QLQQVGIEAIGVDDPALDAEVIAVADAGFRSLGLDGFRLEITSLGDDSCRPQYRELLQEF 184

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  + L  + +    +  LR +D         V+ +                        
Sbjct: 185 LFALDLDEETRRRAEINPLRVLDDKRPH----VREMTAN-------------------AP 221

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +M+  LS   ++    +   +                          S    I+  +VRG
Sbjct: 222 VMLDHLSDAAKEHFDTVLAHLDAL-----------------------SVPYVINPRMVRG 258

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E +                 +GGGGRYDGL+++  G+++   GF +G+ R 
Sbjct: 259 LDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGRDLSGIGFGLGVDRT 310

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++   +         V +  +   +D+  +  +    LR AG+R ++  G  ++  
Sbjct: 311 LLALRAEGRTAGETAR---VDVYAVPLGADAKVRLAVLATQLRAAGVRVDVAYG-DRSLK 366

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             +K ADR    +A++ G  +   G + +K +A G+++     +  +   +R
Sbjct: 367 GAMKGADRSGASIALVAGDRDLEAGTVGVKSMATGEQVDVASDDVVAEVLSR 418


>gi|115462139|ref|NP_001054669.1| Os05g0150900 [Oryza sativa Japonica Group]
 gi|109940176|sp|P93422|SYH_ORYSJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|54291833|gb|AAV32201.1| histidyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113578220|dbj|BAF16583.1| Os05g0150900 [Oryza sativa Japonica Group]
          Length = 788

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 128/468 (27%), Positives = 206/468 (44%), Gaps = 42/468 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            ++P+G  D   +++ IR      I  +++ +G   ++TP+ E  ++L GK+  D    +
Sbjct: 353 PKIPKGTRDFGKEQMAIREHAFSIITGVFKMHGAVSLDTPVFELRETLMGKYGED----S 408

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+
Sbjct: 409 KLIYDLADQGGELCSLRYDLTVPFARYVAMNN---ISSLKRYQIAKVYRRDNPSKGRYRE 465

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G           + +   L    +    Y I +N+RK+LDG+LE  G+  +
Sbjct: 466 FYQCDFDIAGVYETMEPDFEVIKVLTELLD-QLDIGTYEIKLNHRKLLDGMLEICGVPPE 524

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +   V  +IDKLDK   + VK  L +              +++E  D +   +   
Sbjct: 525 ----KFRTVCSSIDKLDKQTFEQVKKELVDE-----------KGISNETADKIGDLVKTR 569

Query: 248 LEK-----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                    + +      G        NEL ++ + + K      +I    ++ RGL+YY
Sbjct: 570 GPPLEVLLELRKEGSKFMGNAGSVTALNELEILFKALDK-ANAIGKIVFDLSLARGLDYY 628

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YEA+               GS+  GGRYD LV  F G+ VPA G S+GI R+   +
Sbjct: 629 TGVIYEAVFKGTT--------QVGSIAAGGRYDNLVGMFSGKQVPAVGVSLGIERVFAIM 680

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E    N        +       D +         L  AGI+AE  L +     N LK
Sbjct: 681 EQQE-MEKNQIRATETEVLVSIIGKDLILAA-ELVSELWNAGIKAEFKLTTR--IQNHLK 736

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           YA +   P  ++ G  E S G +++K+LA  +E   +        + +
Sbjct: 737 YATQSGIPWMVLVGESEISSGKVKLKNLAASQEEEVDRTEFAQVLKQK 784


>gi|300724171|ref|YP_003713488.1| histidine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297630705|emb|CBJ91370.1| histidine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 426

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 96/473 (20%), Positives = 175/473 (36%), Gaps = 62/473 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K         RG  DC   E  I  R+  +++ +   YGF  I TP++E +    + +
Sbjct: 1   MTKN----IPAIRGMNDCLPAETAIWQRVESTVKRVLSGYGFSEIRTPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   ++        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPENTAGCVRAGIQHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAEM +M A     +GI  +     +    +  R  
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAEMILMTARWWRELGIADHVTLELNSIGSLEARAN 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        +KL+E        D   +     +++L  +            A    
Sbjct: 177 YREALVAFLEQHKEKLDE--------DCQRRMYTNPLRVLDSK--NPEIQQLLNDA---- 222

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  + +     L +++  T                         + +I+  
Sbjct: 223 ---PELFDYLDAESKAHFDGLCQILDST-----------------------GIKYRINQR 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G++  GGRYDGLV +  G+          
Sbjct: 257 LVRGLDYYNRTVFEWVTSA--------LGAQGTICAGGRYDGLVEQLGGKAATPA-VGFA 307

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           +    + L   E + + + ++    +        S     +  + +R     +R     G
Sbjct: 308 MGMERMVLLVQEINPDFVADLRVADVYLSSFGEGSQHAALILAEKIRDQLPELRLMTNHG 367

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              NF  QL  A +    +A++ G  E   G + +KDL  G++ +   +   +
Sbjct: 368 GG-NFKKQLVRAGKHGAKVALLLGEDEIQAGNITVKDLRNGEQETLPQQTIAA 419


>gi|78189428|ref|YP_379766.1| histidyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123757010|sp|Q3AQK2|SYH_CHLCH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|78171627|gb|ABB28723.1| histidyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 425

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 100/473 (21%), Positives = 176/473 (37%), Gaps = 59/473 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            +  +G  D    E  + + +     ++   YGF  I TP+ EY+D   + +    D   
Sbjct: 4   FQCVKGTRDILPDESLLWSFVSSHFHHVASLYGFREIRTPMFEYTDLFQRGIGATTDIVG 63

Query: 68  KGVFSLQ-DDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRF 125
           K +FS Q D  G+ I+LR ++TA + R   +N      P    + IG +FR E+   GR 
Sbjct: 64  KEMFSFQPDPAGRSITLRPEMTAGVMRAALQNNLLAQAPLHKLFYIGELFRKERPQAGRQ 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEK 181
           RQF QC  + +G S+  A AE+  +M     A+G+     + +       R      L+ 
Sbjct: 124 RQFNQCGAELLGVSSPAAVAEVMSLMMHFFGALGLTGLTLKVNTLGNAEERLAYREALQA 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                   L          D   +  L+   L + + +     +    A         + 
Sbjct: 184 YFAPHRAML----------DASSQERLEKNPLRILDSKNPALQELIAAA-------PRLY 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L                     E    +   +   + +         I   +VRGL+Y
Sbjct: 227 DYLQ--------------------EASLRDFEKVLFYLTERR---ISYTIDYRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIV 360
           Y    +E                  ++GGGGRYD L        ++PA GF++G+ RL++
Sbjct: 264 YCHTAFEVTSNE--------LGAQDAIGGGGRYDALARELGSATDIPAVGFAVGMERLLI 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+      N       + +       + L         LR  GIR+E+ L + ++   Q
Sbjct: 316 VLEKQGLLGNRHARPPRLYVVV--QQQEMLDHALQLVWRLRNGGIRSELDL-AGRSMKAQ 372

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           ++ A++     A+  G  E + G   +K+LA  ++    I+         V +
Sbjct: 373 MREANKLGALYALFVGASECASGKYGLKNLATSEQTDLSIEAVMQLLHDHVTE 425


>gi|302561717|ref|ZP_07314059.1| histidyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302479335|gb|EFL42428.1| histidyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 420

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 91/474 (19%), Positives = 174/474 (36%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I       G+  IETP  E  +   + + +  D  
Sbjct: 3   TFKAPKGTYDLIPPDSAKYLAVREAIAAPLRGSGYGYIETPGFENVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++ +   G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYAFETKGGDRLALRPEGTASVLRAALEANLHKAGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G++          D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLQNFRILLNSLGDKECRPVYRSALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  D      +  LR +D       + V+  L                     
Sbjct: 183 DFLRGLDLDEDTLRRAEINPLRVLDDK----REAVQKQLT-------------------G 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+ EL+       +    L                       V
Sbjct: 220 APLLRDYLCDACKAYHEEVRELITAAGVVFEDDPRL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++       ++      +  +    ++          LR  G+ A+   G  K 
Sbjct: 309 RTVLALEAEGV---QLELPATTSVFAVPLGEEARRVLFAKVTELRKNGVAADFAYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R     A++ G  + + G++Q+KD+  G++ +  +    +  E+R
Sbjct: 365 LKAAMKAANRSGARYALVLGERDLAEGVVQLKDMESGEQTAVGVNEIVAELESR 418


>gi|145628725|ref|ZP_01784525.1| histidyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979195|gb|EDJ88881.1| histidyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 423

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 102/475 (21%), Positives = 190/475 (40%), Gaps = 56/475 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ M+     +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIMLTYRLWKALGI---DQHVTLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E    L   ++ ++     +++L  +                 +    
Sbjct: 173 RANYRSDLVGFLENHQDLMNDEEKERLVRNPLRILDTKN---------PELQKVLDNAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +      +L  L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDDESRAHFEQLCSLLDA-----------------------VGIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G   P+ GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     N+     V I  +     +        + +R+    +   M   SS NF
Sbjct: 313 LLVQEVN---PNVPAKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNT-MLHCSSGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARV 471
             Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + + + 
Sbjct: 369 KKQFKRADKSGATLALVIGESEAQNKQVVVKHLQGGTDQQTLDLVNIIDYLQTQF 423


>gi|300934550|ref|ZP_07149806.1| histidyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 428

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 102/481 (21%), Positives = 178/481 (37%), Gaps = 68/481 (14%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            KK       P+G  +           I ++        G++ IE P+ E ++   + + 
Sbjct: 6   AKKKFQALNAPKGVQEYFPPNSHEFLAIREAFTRAAHQAGYEHIELPIFEDTNLFARGVG 65

Query: 62  D-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEK 119
           +  D  +K +++  D  G+ ++LR + TA + R V E+       P +    GP FR E+
Sbjct: 66  ESTDVVSKEMYTFADRGGRSVTLRPEGTAGVIRSVIEHNLDRGQLPVKLVYAGPFFRYER 125

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINN 171
              GR+RQ  Q  V+ VG      DAE+  +       VG            D       
Sbjct: 126 PQAGRYRQLQQVGVEAVGVDDPYLDAEVIALADRCYRTVGLTGQRLELTSLGDGSDRPAY 185

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
           R  L   L  + L  +      L  LR +D                       D    A 
Sbjct: 186 RAKLQEFLHTLPLDEETARRADLNPLRVLDDK----------------RPEMQDMLADAP 229

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           L  + +                            +        ++ ++   G       I
Sbjct: 230 LMLDHLS---------------------------DSSHEHFETVTGMLDDLG---VEYVI 259

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   GF
Sbjct: 260 NPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQDLSGIGF 311

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            +G+ R ++AL++   S ++ +    V +  +   S++ S+       LR AGI  +M  
Sbjct: 312 GLGVDRTLLALQAEGKSASDARR---VDVYGVALGSEAKSRMARLVNELRAAGISVDMSY 368

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           G  +     +K ADR     A++ G  E   G + +KDLA  ++ +  +    +     +
Sbjct: 369 G-DRGLKGAMKGADRAGAKFALVMGESELEAGNVALKDLAAHEQRNIALDAVVAELSNTL 427

Query: 472 A 472
            
Sbjct: 428 Q 428


>gi|300214567|gb|ADJ78983.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 406

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 98/458 (21%), Positives = 168/458 (36%), Gaps = 65/458 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++ + P+G AD    E      + +  R +++ Y ++ + TP+ E  +   +   +  D 
Sbjct: 1   MKYQRPKGTADILPSESVKWQYVEEKARELFKKYRYEEMRTPIFESFEVFSRTSGETSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P +TY +GP+FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAGVVRSFVENKLYGPEVQKPFKTYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKI 174
           GR R+F Q  V+  G    T D E+  M  D L++ G+           D     N R+ 
Sbjct: 121 GRLREFHQIGVEAFGVDNPTLDVEVMAMAVDLLKSFGLNSLRVAVNTLGDLETRNNYRQA 180

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   LE       D            D  ++     +++L  +   D             
Sbjct: 181 LIDYLEPFEAELSD------------DSKERLHKNPLRVLDSKDEKDKE---------IV 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ +L+ D +K    +  L+                               I S 
Sbjct: 220 ANAPSILDYLTEDAQKHFETVKSLLNDL-----------------------GIEYVIDSN 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   ++E +      N K   V       GG Y GLV +  G   P  GF +G
Sbjct: 257 MVRGLDYYNHTIFEIMSDSKAFNGKWTTV-----CAGGHYSGLVEQLGGPQTPGVGFGLG 311

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL++ L + E +      +    +  +     + +      Q LR  G  A+     +
Sbjct: 312 VERLLLILDAEEDALPIENPLD---VYVVGIGDVTNAATLKLVQNLRHQGFTADRDY-LN 367

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
           +    Q K A+R N    +  G  E       +K + K
Sbjct: 368 RKPKGQFKSANRLNARFTLTIGETELQEQEANLKFMEK 405


>gi|118473178|ref|YP_887295.1| histidyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118174465|gb|ABK75361.1| histidyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 426

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 95/472 (20%), Positives = 177/472 (37%), Gaps = 68/472 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + P+G  D    +      + D + +     G+  IE P+ E +    + + +  D  +
Sbjct: 10  FQAPKGVPDYLPPDSAQFVAVRDGLLSAARRAGYGDIELPIFEDTALFARGVGESTDVVS 69

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R V ++       P +    GP FR E+   GR+R
Sbjct: 70  KEMYTFADRGDRSVTLRPEGTAGVIRAVIQHRLDRGALPVKLCYSGPFFRYERPQAGRYR 129

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  V+ +G      DAE+  +      ++G            D       R++L   
Sbjct: 130 QLQQVGVEAIGVDDPALDAEVIAVADAGFRSLGLSGFRLEITSLGDDTCRPAYRELLQEF 189

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L K+ L  + +    +  LR +D                    +  + T  A L  + + 
Sbjct: 190 LFKLDLDEETRRRAEINPLRVLDDK----------------RPHVREMTADAPLMLDHLS 233

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                                      +        +   +   G       I+  +VRG
Sbjct: 234 ---------------------------DSAKEHFETVQTYLDALGVP---YVINPRMVRG 263

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E +                 +GGGGRYDGL+ +  GQ+V   GF +G+ R 
Sbjct: 264 LDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMRQLGGQDVSGIGFGLGVDRT 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++       I+  G V +  +   + +  +       LR  G R ++  G  +   
Sbjct: 316 LLALQAEGV---TIEGAGGVEVFGVPLGAAAKLELAKLAAKLRAGGARVDLAYG-DRGLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             +K ADR     A++ G  +   G + +KDL+ G ++     +  +   +R
Sbjct: 372 GAMKAADRSGAKYALVAGDRDIEAGTVGLKDLSTGDQIDVPADSVVAEVLSR 423


>gi|319943739|ref|ZP_08018020.1| histidine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319742972|gb|EFV95378.1| histidine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 434

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 102/486 (20%), Positives = 185/486 (38%), Gaps = 64/486 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +G  D   +      R  + + +   +YG+  I TP++E +    + L    D   K ++
Sbjct: 10  KGMNDLLPQTSARWQRFEEIVASWARSYGYSQIRTPIVEPTPLFARGLGTVTDIVEKEMY 69

Query: 72  SLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           S +D  +G+ ++LR + TA + R V E+      P R + +GP+FR+E+   GR+RQF Q
Sbjct: 70  SFRDALNGEELTLRPEGTAGVVRAVIEHNLLYDGPRRLWYLGPMFRHERPQRGRYRQFHQ 129

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+ +G      DAE+  M     + +GI+     I                 H  D +
Sbjct: 130 VGVEALGYGGPEVDAEVIAMGQRLWDDLGIEGLQLQINSIGDAPERA------RHRQDLI 183

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
           +        +D+  K  L    L + + +     +         EQ   ++ +L     +
Sbjct: 184 DHFEKHAELLDEEAKRRLHANPLRILDSKNPAMQEII-------EQAPRLIDYLEGPSRE 236

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              +L   +                               ++  +VRG++YY   V+E +
Sbjct: 237 HFEQLRGYLA-----------------------RLGIEATLNPRLVRGMDYYNRTVFEWV 273

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                     +     +V GGGRYD L+    G+  PA GF+IG+ RL+  ++       
Sbjct: 274 T--------DRLGAQATVCGGGRYDALIEMLGGKPAPACGFAIGVERLLDLVEQAGGLG- 324

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
              E     +  +     +++      + LR  GI   M  G   +F +Q K A      
Sbjct: 325 ---EGDAPDVYLISSGDGTMAAALHTAEALRARGIEVLMHAGGG-SFKSQFKRAGASGAH 380

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV-KKIL 489
           LA++ G  E   G   +K L +G+                  Q+ I + +    V + +L
Sbjct: 381 LALVIGEDELKAGEATLKWLREGE------------AGQGGRQVRIRLDDAPEAVGRALL 428

Query: 490 QENKEE 495
            +  E+
Sbjct: 429 GQTDED 434


>gi|317498118|ref|ZP_07956420.1| histidyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894595|gb|EFV16775.1| histidyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 414

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 90/463 (19%), Positives = 179/463 (38%), Gaps = 56/463 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   K++  R  + +  +++  +Y    I TP+ E+++   + + +  D 
Sbjct: 1   MITQAPRGTKDWFGKDMDQRTYLENIFKDLCASYNIHEIITPVFEHTELFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + ISL+ + TA   R   +N       P + + I P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGHRSISLKPEGTAGAIRAYLQNGLANEPQPIKMFYITPAFRYEKPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKIG 183
            RQ  Q  V+ VG+ +  A+ E+  +++  ++ +G+K    HI     +       + + 
Sbjct: 121 LRQHHQFGVEFVGAESPLAEVELITLVSTFIKKIGLKDAKLHINSIGCENCRKEYNKALL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  +         R          +   L + + +     +  K A  T       + +
Sbjct: 181 AYLKEHEEHLCPTCRERM-------EKNPLRVIDCKVPECKEIVKDAPRT-------IDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  + +    EL  L+       +   E+                       VRGL+YYT
Sbjct: 227 LDDECKAHFEELKSLLDALNIPYEVDTEI-----------------------VRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK-GQNVPATGFSIGISRLIVAL 362
             V+E +                 + GGGRYD LV       ++P+ GF +G+ R++  L
Sbjct: 264 KTVFEFVNEDGFT-----------LCGGGRYDNLVHEIDGKVSMPSVGFGMGVERILYFL 312

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +      ++   + +       ++ +K       LR  G   E      ++   Q+K
Sbjct: 313 EEEKVDLPCTRD---IDLYVGILGQEAKAKAYQIVVDLRDQGFVVETDY-LGRSVKAQMK 368

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           YA++ N    II G  E ++    +K++   +  +  +     
Sbjct: 369 YANKLNAKNTIIIGDDELAKNEGNVKNMETREVTTISLDKIAD 411


>gi|168187502|ref|ZP_02622137.1| histidyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294553|gb|EDS76686.1| histidyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 416

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 104/465 (22%), Positives = 182/465 (39%), Gaps = 62/465 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    +    + I D ++ + E Y    I TP+ E+++   + + +  D 
Sbjct: 1   MAIQAPKGTKDLLPMDSYKWHYIEDKLKKLAEEYALKEIRTPIFEHTELFERGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + I+L+ + TAP AR   EN       P + +   PVFR E    GR
Sbjct: 61  VQKEMYTFKDKGDRSITLKPEGTAPAARAFIENGLFNEALPIKMFYFTPVFRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILE 180
            R+  Q  V+  GS   + DAE+  +     +  GI       +       RK  +  L 
Sbjct: 121 LREHHQFGVEVFGSPEASVDAELIGLAMRAFKEFGIDSLELNINNIGCPECRKKYNDALR 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D+L +            +F    ++LL  + +               +   I+
Sbjct: 181 EYFRASYDELCDTC--------KARFERNPMRLLDCKNKR---------CKEIGKDAPII 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++  D +     L   +                          +   K++  IVRGL+
Sbjct: 224 LDYVCDDCKNHFENLKTYLGSL-----------------------NIEYKVNPYIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E I                +V GGGRY+GL+ +  G+  PA GF +GI RLI+
Sbjct: 261 YYTKTVFEIINND------------ITVCGGGRYNGLIEQIGGKPTPAVGFGMGIERLIL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L          KEM    I           +      +LR+ G++AE     +K+   Q
Sbjct: 309 TLMENNIEIPKPKEMD---IFIGSMGDKGKIEAFKLANVLRSKGLKAECDH-MNKSVKAQ 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +KYA++     ++I G  E   G   +K +  G++    + N + 
Sbjct: 365 MKYANKIESLYSMIIGDTEIEEGKANLKRMEDGQQFEVSLNNLDE 409


>gi|110597610|ref|ZP_01385895.1| histidyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340730|gb|EAT59207.1| histidyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 429

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 101/474 (21%), Positives = 187/474 (39%), Gaps = 59/474 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
            + +  +G  D   +E      +   I  +   YGF  I TP+ EY++   + +    D 
Sbjct: 2   PQYQAVKGARDIFPEESAQWKYVEGVIHTVASLYGFSEIRTPVFEYTELFQRGIGSTTDI 61

Query: 66  PNKGVFSLQ-DDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPG 123
             K +FS   D +G+ I+LR ++TA + R   + N  +     + Y IG +FR E+   G
Sbjct: 62  VGKEMFSFLPDPNGRSITLRPEMTAGVMRAALQKNILSAAPVHKLYYIGELFRKERPQAG 121

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGIL 179
           R RQF Q   + +G S   A AE+  +M    E++G++     I      ++R      L
Sbjct: 122 RQRQFSQFGAELLGVSTPAAVAEVITLMMQVFESLGLRNLRLRINSLGDSDDRFRYREAL 181

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +       D+L          D   K  L+   L + + +     +   GA         
Sbjct: 182 KTYFAPFHDRL----------DDSSKERLEKNPLRILDSKNPAIQEIVAGA-------PR 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +LS+                        +   +   +++ G      +I   +VRGL
Sbjct: 225 LYDYLSV--------------------ASVEDFEKVLYYLQERG---ITYEIDHRLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRL 358
           +YY    +E            +     ++GGGGRYDGL         VPA+GF+ G+ R+
Sbjct: 262 DYYCHTAFEVT--------SSELGAQDAIGGGGRYDGLARELGSSSEVPASGFAAGMERV 313

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++          +   V +      ++           LR AGIR E+ L ++++  
Sbjct: 314 LLTMEKQGLFAALTPQGPVVYVVL--QQAELADHGMQVAWRLRKAGIRTEIDL-AARSMK 370

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            Q++ A+R     A+  G+ E + G+   K+L   ++ +  ++          +
Sbjct: 371 AQMRDANRMRASWALFIGSAEVTTGLYAFKNLVTSEQTTLSLEAVLETLHETAS 424


>gi|260655467|ref|ZP_05860955.1| histidine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629915|gb|EEX48109.1| histidine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 423

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 103/468 (22%), Positives = 174/468 (37%), Gaps = 52/468 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + PRG  D    E      +L   R   E + +  +  P+ E+++   + + D  D  
Sbjct: 4   NIKAPRGVRDILPDESWKWAYVLGRTRQTAEAFHYSEVHLPVFEHTELFARGVGDTTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D  G+ I+LR +LTA + R   EN   +   P + +  GP+FR E+   GR+
Sbjct: 64  EKEMYTFTDKGGRSITLRPELTAGMVRSYVENGLGSSSSPVKLWGYGPMFRYERPQKGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q D + +GS +   D E+ M   D    +G+K  +  +          +  K+ L 
Sbjct: 124 RQFWQIDFEQLGSDSPLTDVEVIMTAVDLFADLGMKNLEVVVNSVGCPACRPVYRKVLLD 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +     L        L +     +++L      D   D    A         +   L 
Sbjct: 184 YLESRRSELCET----CLSRMERNPLRVL------DCKTDHEVVAG-----APAIFDSLC 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +       + E +                                  T+VRGL+YYT  
Sbjct: 229 SECADHFAAVKEGLA-----------------------RLGVPYSTDKTLVRGLDYYTKT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E         +        +V GGGRYD L     G +VP  GF+ G+ R+++ +   
Sbjct: 266 AFEV--------KSGDLGAQSAVCGGGRYDNLSEAIGGPHVPGVGFAAGLDRMLLVMGEQ 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                +      V    +  D             LR AG  A+M     ++  +QLK A 
Sbjct: 318 G---CSFGPEPSVDAQVICLDESVKLDALEILYRLRRAGFNADMDY-QKRSMKSQLKQAL 373

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
                 A+I G  E SRG++ +KDL   ++   +    E+   A + +
Sbjct: 374 AGRAAAAVILGADEISRGVVALKDLRSAEQKDVQSSELENALAALLDE 421


>gi|196008537|ref|XP_002114134.1| hypothetical protein TRIADDRAFT_58286 [Trichoplax adhaerens]
 gi|190583153|gb|EDV23224.1| hypothetical protein TRIADDRAFT_58286 [Trichoplax adhaerens]
          Length = 484

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 130/474 (27%), Positives = 208/474 (43%), Gaps = 37/474 (7%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           K+  + P+G  D   K++ IR  +  +I   +E +G + I TPL E  + L     ++  
Sbjct: 41  KIALKTPKGTRDFSPKQMAIRKVLFRTIEKCFERHGAETISTPLFELKEVLTGKYGED-- 98

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPG 123
            +K ++ L D  G+  SLRYDLT P ARY+A N    +   + Y I PV+R +      G
Sbjct: 99  -SKLIYDLSDQGGELCSLRYDLTVPFARYLAMNK---IQKIKRYHIAPVYRRDNPSITRG 154

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G  +  ADAE   ++++ L AV +    + I INNRKILDG+ E  G
Sbjct: 155 RYREFFQCDYDVAGYDSRIADAECIRIVSEILSAVDV--GSFIIKINNRKILDGMFEISG 212

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  +    +   +  A+DKLDK   + V+  + +              L  +  D +  F
Sbjct: 213 VPTE----KFREISSAVDKLDKMSWEEVRKEMTDE-----------KGLDGKVADSIGDF 257

Query: 244 LSIDLEKSMHELYELV---KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +     +    E V    G  +   G NE+  I EL  +     ++I    ++ RGL+
Sbjct: 258 VKLKGGLDLISHLEGVVKETGNNSLLVGVNEMRAIIELCHEYNVT-DKILFDLSLARGLD 316

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +YEA+L    +               G     +   KG+ +P  G SIGI RL  
Sbjct: 317 YYTGVIYEAVLTDDKVGVGSVAGGGRYDNLVG-----MFHPKGKQIPCVGVSIGIERLFS 371

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L++               +                   L  AGI AE     +    NQ
Sbjct: 372 ILEAKAKG---NVRTTATDVYVASAQKGLSKHRIALCSNLWDAGIGAETAYSENPKLLNQ 428

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           L++ +  + PL II G  E  +G+++I+D    +E+    +N       ++ Q 
Sbjct: 429 LQHCEVNDIPLVIIIGESELQQGIVKIRDTNSREEVDVSRENMIETINKKLNQK 482


>gi|182420365|ref|ZP_02951587.1| histidyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237668877|ref|ZP_04528861.1| histidine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182375731|gb|EDT73329.1| histidyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657225|gb|EEP54781.1| histidine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 419

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 101/459 (22%), Positives = 179/459 (38%), Gaps = 54/459 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + P+G  D   ++    + +    RN+ + YG   I TP+ E+++   + + D  D   
Sbjct: 5   IQAPKGTKDMLPQDAYKWHYVESVFRNVTKTYGIREIRTPIFEHTELFLRGVGDTTDIVQ 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + I+L+ + TAP  R   EN       P + Y I P FR E    GR R
Sbjct: 65  KEMYTFNDKGDRSITLKPEGTAPAVRAFVENRLFNEAQPTKLYYITPAFRYENVQKGRLR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF QC ++  GS   T D E   +  DTL  +G+K    HI             +     
Sbjct: 125 QFHQCGIEMFGSKEPTMDVEAIKVAMDTLSKLGLKSLSLHINNLGCPTCRAKYNEALKKF 184

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +  E L          +F    +++L  + +           N  ++    ++ ++  
Sbjct: 185 LQENYENLCDT----CKSRFEKNPMRILDCKEKR---------CNEITKNAPQILDYVCE 231

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + E   + + E +                              +I   IVRGL+YYT  +
Sbjct: 232 ECETHFNSVKEYLDVLE-----------------------IPYEIDQGIVRGLDYYTKTI 268

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I                +V GGGRYD L+S   G  +PA GF+IG+ R+I+ L++  
Sbjct: 269 FEIINDD------------FTVCGGGRYDKLISELGGPEMPAVGFAIGVERIIMTLENEG 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     + +       +           LRT G + E+     ++   ++K+A++
Sbjct: 317 I---EIPNDNLIDLYIAARGEEEKKTAFKLASDLRTLGGKCEINH-MGRSIKAEMKFANK 372

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
                  I G  E +   + +K ++ G+     ++N E 
Sbjct: 373 LGAAFTTILGEDELANKKINLKRMSDGEIFEASLENTEE 411


>gi|73747962|ref|YP_307201.1| histidyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|147668658|ref|YP_001213476.1| histidyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|83305868|sp|Q3ZWB6|SYH_DEHSC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189082292|sp|A5FSR7|SYH_DEHSB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|73659678|emb|CAI82285.1| histidyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|146269606|gb|ABQ16598.1| histidyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 418

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 93/485 (19%), Positives = 182/485 (37%), Gaps = 72/485 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D   ++    + +      I   YG+   +TP+ E +    + + +  D  +
Sbjct: 2   YQSPRGTEDILPEDQPYWHFVRQQAARIAALYGYQRTDTPVFEDAGLFVRSVGEGTDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D  G  ++LR + TAP+ R   E+       P + Y +  +FR ++   GR+R
Sbjct: 62  KEMYTFEDRGGDKLTLRPEGTAPVCRAYLEHGMQTRTKPVKLYYLSSIFRYDRPQAGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGLH 185
           Q  Q   + +G +  + DAE+  M       +GI      +  I  R+     +  +  +
Sbjct: 122 QHHQFGFEAIGEADASLDAEIIEMAWSFYNLLGITDLSLELNSIGCRQCRPNYISALKDY 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 +        D   +     ++  L + +          A  +++       +L 
Sbjct: 182 YQQHAGKL-----CPDCNTRLDKNTLR--LLDCKRAECQAVAGNAPRSAD-------YLC 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D                     ++ L     ++    + + R+      VRGL+YY+  
Sbjct: 228 PDC-----------------LAHYSRLKECLTILDLPFHENFRL------VRGLDYYSRT 264

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E         +        ++GGGGRYDGL+ +  G+  PA GF+ GI R+I+ LK  
Sbjct: 265 VFEI--------QPMAEGAQSTIGGGGRYDGLIEQLGGEATPAMGFATGIERIILNLKRQ 316

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG-SSKNFGNQLKYA 424
               + +       +        +          LR AGI   ++   + K+   QL+ A
Sbjct: 317 GIVPSPLPSPA---VFLAYMGETASLASFALASDLRKAGIG--IYQTYAQKSIKAQLRQA 371

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           +       +I G  E  +G   ++++                      Q  IP+ +L+  
Sbjct: 372 NSLGVDWVVILGEEELKQGCAVLRNMK------------------EAGQANIPLDQLICE 413

Query: 485 VKKIL 489
           +KK +
Sbjct: 414 IKKQI 418


>gi|282879863|ref|ZP_06288590.1| histidine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281306257|gb|EFA98290.1| histidine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 461

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 135/489 (27%), Positives = 217/489 (44%), Gaps = 61/489 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  + +G  D    E+  RN I ++I+ +Y  YG+  IETP LE   +L GK+  + D  
Sbjct: 9   KPSIVKGTRDFSPAEMSKRNYIFNTIKEVYALYGYQQIETPSLETLQTLMGKYGEEGD-- 66

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F + +          + +                LRYDLT P ARYV  + D I F
Sbjct: 67  -KLLFKVLNSGDFLNKVSDEELQERNVLKLASKICEKGLRYDLTVPFARYVVMHHDEIQF 125

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++ +     G++   
Sbjct: 126 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDEVFTRFGVRVL- 184

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             + INNRKIL GI E IG          + +  AIDKLDK GL+GV   L         
Sbjct: 185 --LKINNRKILTGIAEVIGAADK-----IVDITVAIDKLDKIGLEGVNQELA-------- 229

Query: 225 DFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                A + ++ I+ +   +S+    E+ +  + E++K +  G KG  E+  I ++++  
Sbjct: 230 ----NAGIDADAIEKLQPIISLQGTNEEKLKTIGEVLKDSEIGLKGVEEVSYILKVLKSV 285

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G + + I++  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F 
Sbjct: 286 GLH-HEIELDLTLARGLNYYTGAIFEV---------KALDVEIGSITGGGRYDNLTGIFG 335

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +   G S G  R+   L +L            +L           +         R 
Sbjct: 336 KPGLSGVGISFGADRIYDVLHALNLYPKETIGGTQLLFINFGDQET--AYCLPLVNEARR 393

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            G+  E+F  + K    Q+ YA+    P   + G  E     + +KD+  G++      +
Sbjct: 394 QGVCTELFPDAVK-MKKQMSYANAHEIPYVALAGENEMKENKITLKDMRSGEQKLLSKDD 452

Query: 463 NESWREARV 471
              +  A+ 
Sbjct: 453 LIPFLLAQQ 461


>gi|158284791|ref|XP_307883.4| AGAP002294-PA [Anopheles gambiae str. PEST]
 gi|157020760|gb|EAA03789.4| AGAP002294-PA [Anopheles gambiae str. PEST]
          Length = 484

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 108/473 (22%), Positives = 202/473 (42%), Gaps = 29/473 (6%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPD 62
              L  + P+G  D     + +R R+LD +  ++  +G  P++TP+ E  + L G++  +
Sbjct: 30  NRNLPLKTPKGTRDYGPGAMALRQRLLDQVVRVFRKHGAVPLDTPVFERKELLAGRYGEE 89

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                K ++ LQ+  G+ ++LRYDLT P ARYVA +  + +   +         + +   
Sbjct: 90  A----KLIYELQEQGGEPLALRYDLTVPFARYVALHNLSSMKRYQLA-KVYRRDSPQPAR 144

Query: 123 GRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           GR R+F QCD D          DAE   ++ + L  +      + + +N+RK+LD +LE 
Sbjct: 145 GRLREFYQCDFDIAGAYDPMLPDAECVKVVCEVLHQLD--IGAFVVKVNHRKLLDALLEV 202

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  +        V  +IDKLDK     V+  L                L  E ++ + 
Sbjct: 203 CGVSAE----MFRTVCSSIDKLDKMPWDAVREEL-----------ILQKGLQVETVEQIG 247

Query: 242 SFLSIDLEKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++++     +         +      ++  +EL ++ +        ++R+    ++ RG
Sbjct: 248 MYVTLHGGLELVDRLADDAKLNCLPGAKEALDELRLLFQYC-ALFQVADRLSFDLSLARG 306

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVF-GSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           L+YYTG +YEA+L     ++      F GSV GGGRYD LV  F                
Sbjct: 307 LDYYTGVIYEAVLVDGDDDDDGIQAAFVGSVAGGGRYDNLVGTFNPHRKQLVPCVGVSIG 366

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +      +E+ T     +    +           K       L  A I AE    ++   
Sbjct: 367 VERLFCIMEARTREEPRINHTQVYVASVHKGLHLKRLEILNRLWAAEISAEHSYKTNPKL 426

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +QL++ ++   P  +I G  E +RG+++++++A  +E   E++       ++
Sbjct: 427 LDQLQHCEQYRIPYTVIIGDVELARGVVKLRNVATRQEEEVELEMLIEKVSSQ 479


>gi|169335836|ref|ZP_02863029.1| hypothetical protein ANASTE_02262 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258574|gb|EDS72540.1| hypothetical protein ANASTE_02262 [Anaerofustis stercorihominis DSM
           17244]
          Length = 424

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 98/469 (20%), Positives = 191/469 (40%), Gaps = 51/469 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +   P+G  D   KE++    +   I+ I   + +  I  P  E+     + + +  D  
Sbjct: 4   KIFAPKGTRDILPKEVKAWEMVEGKIKEICSAFNYKQIRVPDFEHYALFDRGVGESTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K +++L        +L+ + T+ + R   E+   + + P + Y I   FR+E+   GR 
Sbjct: 64  SKEMYTLNHRGSDVFALKPEGTSSVIRAFIEHGMTSGITPTKLYYITSCFRSERPQKGRQ 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGL 184
           RQF Q  ++ +GS + + DAE+ M++      + IK  +  I      K      E++  
Sbjct: 124 RQFHQFGIEAIGSYSASMDAEVIMLVDTLFSELKIKGLELRINSVGCPKCRSDYYERLKN 183

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +   NE        D  D+     +++L  + + ++     K A L       MV +L
Sbjct: 184 FVEPFKNEL-----CEDCQDRLSKNPMRIL--DCKNEHCKTLLKEAPL-------MVDYL 229

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D ++    + E +                               +   IVRGL+YYT 
Sbjct: 230 CEDCKEHFESVKEYLNSAGID-----------------------FVVDPKIVRGLDYYTQ 266

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +               G+V GGGRY+GLV    G + P  GF +G+ RL++ ++ 
Sbjct: 267 TAFEFVSTD--------LGSQGTVCGGGRYNGLVKMIGGSDTPGVGFGLGLERLMLIMEE 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                 N  E   + I       D+L       + L   GI++ + +   ++   Q+KYA
Sbjct: 319 QGL--LNDMEEDGIDIYLAPVGKDALKIAFKSFRELTKKGIKSGIDV-MDRSLKAQMKYA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           ++ N     I G  E ++G+  ++++   ++   +I+N   + +  + +
Sbjct: 376 NKVNTKYTAILGEDELNKGVYTVRNMGTKEQEEIKIENLTEYIKGSLGE 424


>gi|254363199|ref|ZP_04979248.1| histidine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153095093|gb|EDN75644.1| histidine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 423

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 107/494 (21%), Positives = 195/494 (39%), Gaps = 76/494 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   +   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCSPSESPLWQWVEQKVRNVLASYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E         R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIERGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ ++ A   + +GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEVFGIANPEIDAELIILTARLWKELGI---DQHVSLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                    K  E    L   ++ ++   + +++L  +     +                
Sbjct: 173 RANYRSALVKFLENHTALMNEEEKERLVKKPLRILDTKNEALQN---------VLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  D  +   +L  L+                            R +++  +VRGL
Sbjct: 224 LLDYLDDDSREHFTQLCALLDA-----------------------MGIRYEVNPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGSQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLGSSK 415
           + ++ +    +  K    V +  +     +        + +R+     G+   M   S  
Sbjct: 313 LLVQEVNKEIDLPKT---VDVYIVFSGEGATLNAFQLAEQIRSELPHVGV---MTHCSGG 366

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            F  Q K AD+    +A++ G  E +   + IKDL  G E                 QIT
Sbjct: 367 KFQKQFKRADKVEAQIALVIGESEVAEKQVVIKDLRSGAE-----------------QIT 409

Query: 476 IPISELVSTVKKIL 489
           I  SEL++ + K  
Sbjct: 410 IAQSELIAELSKRF 423


>gi|312076126|ref|XP_003140721.1| histidyl-tRNA synthetase [Loa loa]
 gi|307764112|gb|EFO23346.1| histidyl-tRNA synthetase [Loa loa]
          Length = 521

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 135/497 (27%), Positives = 214/497 (43%), Gaps = 43/497 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPD 62
           K K     PRG  D   +++ IR ++L ++   ++ +G   I+TP+ E  D  LGK+  +
Sbjct: 55  KRKFEIRCPRGTRDYGPQDMAIREQVLSTVTECFKRHGAVTIDTPVFELRDILLGKYGEE 114

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                K ++ L D  G+ +SLRYDLT P ARY+A N    V   + Y IG V+R +    
Sbjct: 115 G---GKLIYDLSDQGGELLSLRYDLTVPFARYLAMNK--TVVYLKRYHIGKVYRRDNPSR 169

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GRFR+F QCD D  GS          + + + +    +    + I +N++ +LDG+    
Sbjct: 170 GRFREFYQCDFDIAGSYDLMIPEAELLRIVNEILN-ALDVGAFEIKVNHKLLLDGMFAVC 228

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+           V  +IDKLDK   + ++  L   +  +  D            +   S
Sbjct: 229 GVPKK----HFKDVCSSIDKLDKLPWEDIRNELCNEKQIHC-DIVSKLETYVCLREHNSS 283

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
             + DL     +     K     +K  +E+  + E     G  S  I    ++ RGL+YY
Sbjct: 284 LTNFDLLNWFEKDEATSKNND-IQKAVSEMKQLLEYCELFGVLSTVIIEP-SLARGLDYY 341

Query: 303 TGCVYEAILGFPVM--------NEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSI 353
           TG ++E  L             +E+ + +  GSV GGGRYD LVS F     VP  G SI
Sbjct: 342 TGAIFEVTLKNSGKIQMENSETDEETRSMNIGSVAGGGRYDNLVSMFLPKHKVPCVGISI 401

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL   +K                +         + +     ++L    I+AEM L +
Sbjct: 402 GIERLFTIMKEKSKM--EHVRSKDTQVLVASAQKKLVKERMKICRLLWDNNIKAEMALKA 459

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +    +Q++Y +    PLAII G  E   G+L+++D+                     A+
Sbjct: 460 NPKMLDQMQYCEEHKIPLAIIVGERELEEGILKLRDVPSR------------------AE 501

Query: 474 ITIPISELVSTVKKILQ 490
             IP   LV  +++ LQ
Sbjct: 502 QDIPRDNLVEELERRLQ 518


>gi|240281922|gb|EER45425.1| histidyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325088061|gb|EGC41371.1| histidyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 537

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 120/532 (22%), Positives = 213/532 (40%), Gaps = 70/532 (13%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           MGK+      + P+G  D    +  +R+RI ++I  +++ +G   ++TP+ E  D L   
Sbjct: 1   MGKEKVSFNLKTPKGTKDWFGADGLLRDRIFNTITEVFKRHGATSLDTPVFELRDILAGK 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N +                   
Sbjct: 61  YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPNIRNVKRYHIAKVYRRDQPA 117

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGI 178
              GR R+F QCD+D  G++ +    +  ++   T    G   +  Y I +N+RK+LDG+
Sbjct: 118 MSKGRMREFYQCDIDFAGANFDPMVPDAEILRIATEVFEGLGWKGRYTIKVNHRKVLDGL 177

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E  G+  +    +   +  A+DKLDK     V+  + +              L     D
Sbjct: 178 FEVCGVPKE----KIRTISSAVDKLDKMPWVDVRREMVDE-----------KGLDGNVAD 222

Query: 239 IMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            + +++     + + E     E +    + + G  E+ ++ + +   G   ++I    ++
Sbjct: 223 KIETYVIRKGGRELVESLHKDEALLANSSAKTGLEEMALLLDYLEAFGIL-DKISFDMSL 281

Query: 296 VRGLEYYTGCVYEAILGFPV----------------------------MNEKQKPVVFGS 327
            RGL+YYTG +YE +                                        +  GS
Sbjct: 282 ARGLDYYTGVIYEVVTEGSAPAAAPPTGEEAQNIRKKSKGKAMHDDDDDRSNDPSIGVGS 341

Query: 328 VGGGGRYDGLVSRFK-GQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDH 385
           V  GGRYDGLV  F     +P  G S G+ R+    K+ +E   +   ++  V +  M  
Sbjct: 342 VAAGGRYDGLVGMFSSRAQIPCVGISFGVDRIFSITKARMERENSVANKICDVDVYVMAF 401

Query: 386 DSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
                   L++     + L  AGI+ E           Q + A+    P A+I G  E +
Sbjct: 402 GGKGFTGLLNERMDVARRLWDAGIKVEFSYKRKPKPIQQFEAAEANAVPFAVILGEDEVA 461

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            G +++K++                       + + +S L   VK  L+  K
Sbjct: 462 AGKVRVKEM------------GLDKGHPEKDGVLVNVSTLAEEVKSRLERKK 501


>gi|323450096|gb|EGB05979.1| hypothetical protein AURANDRAFT_30004 [Aureococcus anophagefferens]
          Length = 485

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 119/469 (25%), Positives = 201/469 (42%), Gaps = 35/469 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L    PRG  D   +E+R+RN +    R     +GF+  ++P+LE      +   +E   
Sbjct: 46  LDLNPPRGTRDFYPEELRVRNWLFGQWRATAAAHGFEEYDSPVLESEALYVRKAGEE--V 103

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +++ +D  G+ ++LR ++T  LAR V    + +  P + + +   +R E+   GR R
Sbjct: 104 TQQLYNFEDKGGRRVALRPEMTPSLARMVMARKNALPLPVKWFSVPQCWRYERTTRGRRR 163

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q ++D  G    TA+AE+   +    E VGI   D  I IN+R++L  +L K     
Sbjct: 164 EHYQWNMDIWGVPGVTAEAEVLAAVVGFFERVGIDSADVGIKINSREVLAELLAKTCGVD 223

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                        +DK            L +       D     +++ + +D +V  L  
Sbjct: 224 QADGARFAATCVLVDK------------LEKVPAAKLYDDFAALDVSPDAVDALVEKLGE 271

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
               S+  L  L+            L  +  L    GY ++ +   +++VRGL YYTG V
Sbjct: 272 GG--SIEALEALLGADSPAL---ANLREVYALAEAYGY-ADWLVFDASVVRGLAYYTGVV 325

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EA           +     ++ GGGRYD L+  F G  +PA GF  G + ++  L+   
Sbjct: 326 FEAF---------DRSGELRAICGGGRYDKLLESFGGDALPAVGFGFGDAVVMELLEMKG 376

Query: 367 SSTNNIKEMGPVLITTM----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
              +    +  VL        D+D+            LR  G+R ++ L   K      K
Sbjct: 377 LVPDLDSSVDAVLFALASGDGDNDAALARDAAGVASTLRKLGLRVDLVL-EPKKPKWAFK 435

Query: 423 YADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREAR 470
           +ADR+N PLA++    E + G  L +KDL  G + +  +    +W EAR
Sbjct: 436 HADRKNAPLALMLAPDEWANGRALVVKDLGTGDQANVPLDELPAWLEAR 484


>gi|145634635|ref|ZP_01790344.1| histidyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268180|gb|EDK08175.1| histidyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 423

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 104/475 (21%), Positives = 195/475 (41%), Gaps = 56/475 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ M+     +A+GI +    + +N+   L+   
Sbjct: 116 PQKGRYRQFHQAGVEVFGIANPEIDAELIMLTYRLWKALGIDQY-VTLQLNSIGSLEARA 174

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                                    +  L G      +  +D   +      L       
Sbjct: 175 NY-----------------------RSALVGFLKNHQDLMSDEEKERLVKNPL------R 205

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++   + +L+K +    EL+      ++       +  L+   G    + +I+  +VRGL
Sbjct: 206 ILDTKNPELQKILDNAPELLD--YLDDESREHFEQLCALLDAVG---IQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G   P+ GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     N+     V I  +     +        + +R+    +   M   S  NF
Sbjct: 313 LLVQEVN---PNVPVKSAVDIYVVYQGEGATLVAFELAEKVRSELPHLNT-MLHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARV 471
             Q K AD+    LA++ G  E     + +K L  G  + + ++ N   + + + 
Sbjct: 369 KKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGADQQTLDLVNVIDYIQTQF 423


>gi|224010758|ref|XP_002294336.1| histidyl tRNA synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220969831|gb|EED88170.1| histidyl tRNA synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 464

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 120/473 (25%), Positives = 211/473 (44%), Gaps = 41/473 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R ++ +G  D   +++ IR++    IR +++ +G   I+TP+ E  ++L     ++   +
Sbjct: 4   RPKVAKGTRDYLPEQMSIRDKAFTIIRRVFKRHGAVEIDTPVFELKETLTGKYGED---S 60

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPGRF 125
           K ++ L D  G+ ++LRYDLT P AR++A N    V   + + IG V+R ++     GR+
Sbjct: 61  KLIYDLADQGGELLALRYDLTVPFARFLAVN---AVGNIKRFHIGKVYRRDQPALSRGRY 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F QCD D  G          C+ +A  +    +   D+ I +N+R++LD IL+  G+ 
Sbjct: 118 REFYQCDFDIAGVYGRMVPDSECLAVACEILD-SLPIGDFGIKLNHRRLLDAILDLCGVP 176

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D    +   +  A+DKLDK     V+  + E              LT +  D +  F+ 
Sbjct: 177 AD----KFRTICSAVDKLDKEPWSEVRREMVE-----------DKGLTGDVADRIGEFVV 221

Query: 246 IDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  +     KS+ +  +             ++ ++ E +         I    ++ RGL+
Sbjct: 222 LKGKPWDLYKSLMDEKK-FGNHKGAMAAMEDMRILFEYLEAMDKLK-FISFDLSLARGLD 279

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRL 358
           YYTG +YEA+               GS+GGGGRYD LVS F+      P  G S+GI R+
Sbjct: 280 YYTGVIYEAVCMNGNT-------QVGSIGGGGRYDNLVSMFQEAGKVTPCVGVSVGIERV 332

Query: 359 IVALKS-LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
              ++  L        +   V +       + + +    T +L  A I AE     +   
Sbjct: 333 FTLMEERLRQEQGGSIKQPNVSVLVASAGENLMQERMKLTNILWDANISAEFSQQDNPKL 392

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             ++  A  R+ P  +I G  E   G  ++KDL    E + E+K+  +    +
Sbjct: 393 KFEIANALDRDIPFMVISGEEEAKEGRCKVKDLKARTEETVEVKDLVATLRGK 445


>gi|317496045|ref|ZP_07954405.1| histidyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913620|gb|EFV35106.1| histidyl-tRNA synthetase [Gemella moribillum M424]
          Length = 426

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 106/492 (21%), Positives = 198/492 (40%), Gaps = 71/492 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +   +PRG  D   +E R    I + +R I  ++ ++ I TP+ E ++   + + D  D 
Sbjct: 1   MVISMPRGTQDILPEESRKWQYIEEKLRKISSDFCYEEIRTPMFESTELFSRGVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K +++  D   + ++LR + TA   R   EN      + P + Y +GP+FR E+   G
Sbjct: 61  VQKEMYTFMDKSDRSLTLRPEGTAGTVRSYIENKLFAQTIQPQKLYYVGPMFRYERKQKG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R+RQF+Q  V+ +G  +   DAE+  +  +  +  GI+     I    N +      E +
Sbjct: 121 RYRQFVQYGVEVIGDESPKIDAEVISLAYNIYKIFGIENIKVSINSLGNPEERRAYNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H + +++E        D  ++     +++L  + + D + +  K A         ++ 
Sbjct: 181 IKHFEPRIHEFDE-----DCNNRLYKNPMRIL--DCKVDANHELVKTA-------PRLLE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +    E+   +       +  + L                       VRGL+YY
Sbjct: 227 YLGEESKAYFAEVLRHLDALGVKYEIDHNL-----------------------VRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVA 361
           T   +E ++  P        V   ++ GGGRY+GLV      ++    GF++ I RL++A
Sbjct: 264 THTAFEIMIDNPE-------VELKTLCGGGRYNGLVKLLDGPEDKKGIGFALSIERLLLA 316

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+S   +         + +  +     +       T  LR AG +A+      K    Q+
Sbjct: 317 LESENITLPID---DTIDLFVVSMGEKAGDAAVKLTNDLRLAGYKAQNDYF-DKKMKAQM 372

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K ADR    L+II G  E       +KD+                      Q T+    +
Sbjct: 373 KIADRYKAKLSIIIGESELENDEYVVKDMES------------------FNQETVKRENI 414

Query: 482 VSTVKKILQENK 493
           +  +++ L+  K
Sbjct: 415 IKYLEEKLRGEK 426


>gi|229826225|ref|ZP_04452294.1| hypothetical protein GCWU000182_01597 [Abiotrophia defectiva ATCC
           49176]
 gi|229789095|gb|EEP25209.1| hypothetical protein GCWU000182_01597 [Abiotrophia defectiva ATCC
           49176]
          Length = 416

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 99/465 (21%), Positives = 181/465 (38%), Gaps = 62/465 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +    P+G  D   + +  R +I    R +   Y    I TP  E++    + + D  D 
Sbjct: 1   MITNRPKGTQDWFGENMWKRTKIEAIARELCSAYNIGEIITPAFEHTVLFNRSVGDTTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + ISL+ + TA   R   EN    +  P + +     FR E+   GR
Sbjct: 61  VQKEMYTFKDKGDREISLKPEGTAGTIRAYLENNLYALPQPIKMFYFTQAFRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI----GINNRKILDGILE 180
            RQ  Q  V+ VGS +   + E+  ++++ ++ +G+K    HI        RK  +  L 
Sbjct: 121 LRQHHQFGVEFVGSPSPMVEVELITLVSEFIKRIGLKDVKLHINSIGYGECRKKYNDALL 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 + +L          D   +     ++++  +                 E+    
Sbjct: 181 GYLKGYEAEL--------CEDCKVRMQKNPLRVIDCK---------VPSCKAIVEKAPRT 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  + +     L +++           EL +  E+              + IVRGL+
Sbjct: 224 LDFLDEECKNHFDTLQKMLT----------ELNIPFEI-------------DTGIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK-GQNVPATGFSIGISRLI 359
           YYT  V+E +                 + GGGRYDGL++     QN+PA GF +GI R++
Sbjct: 261 YYTKTVFEFVDKDGFT-----------LCGGGRYDGLINEIDGKQNIPAVGFGMGIERIL 309

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L+    S   +       +       +  +K       LR  G+  E      ++   
Sbjct: 310 YFLEKEGVSLGEMP---HPRLYVGIMGDEVKAKAFEIVTKLRNKGVIVETDY-LDRSVKA 365

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           Q+KYA++      +I G  E   G++++K++  G E   + +  E
Sbjct: 366 QMKYANKLGVDYTVIIGQNEAESGLVKLKNMETGDETEVKFEELE 410


>gi|115448755|ref|NP_001048157.1| Os02g0754700 [Oryza sativa Japonica Group]
 gi|46805948|dbj|BAD17242.1| putative histidine-tRNA ligase [Oryza sativa Japonica Group]
 gi|113537688|dbj|BAF10071.1| Os02g0754700 [Oryza sativa Japonica Group]
 gi|125541177|gb|EAY87572.1| hypothetical protein OsI_08984 [Oryza sativa Indica Group]
 gi|125583728|gb|EAZ24659.1| hypothetical protein OsJ_08428 [Oryza sativa Japonica Group]
 gi|215694982|dbj|BAG90173.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215708675|dbj|BAG93944.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 487

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 106/454 (23%), Positives = 199/454 (43%), Gaps = 39/454 (8%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            PRG  D P +++R+R  + D  R +     F+ ++ P+LE      +   +E    + +
Sbjct: 73  PPRGTRDFPPEDMRLRTWLFDQFREVSRVMAFEEVDFPVLESEALFIRKAGEE--ITQQL 130

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +D  G+ + LR ++T  LAR V +   ++  P + + IG  +R E+   GR R+  Q
Sbjct: 131 YNFEDKGGRRVVLRPEITPSLARLVIKQGKSVSLPLKWFTIGQCWRYERMTRGRRREHYQ 190

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
            ++D  G     A++E+   +    E +GI  +D  I +++RK+L  +L    +      
Sbjct: 191 WNMDIFGMPKVRAESELLQAIILLFERLGITSSDVGIRVSSRKVLQAVLNMYSIPE---- 246

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
           +    V   +DKL K   + ++  L                L+SE +  ++  LS+    
Sbjct: 247 HLFTEVCVIVDKLGKLTREEIEKKL------------VTIGLSSEAVLGIIEVLSLKSLP 294

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E+        +  +   +L  +     + GY ++ I   +++VRGL YYTG V+EA 
Sbjct: 295 KLEEVL------GSDVEAVADLKKLFSFAEQYGY-ADWICFDASVVRGLAYYTGIVFEAF 347

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                     +     ++ GGGRYD L+S F  +++PA GF  G + ++  LK      +
Sbjct: 348 ---------DRDGKLRAICGGGRYDRLLSTFGSEDIPACGFGFGDAVIVELLKEKGLLPD 398

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
             +++          D +           LR  G   ++     K      K+A+R N  
Sbjct: 399 LSRQIDD---IVFPLDEELEGPACSVASSLRRQGRSVDLV--EDKRLKWVFKHAERINAG 453

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
             I+ G  E  RGM+++K L+  +E   +    +
Sbjct: 454 RLILVGKSEWERGMVRVKILSTREEFEVKAGELQ 487


>gi|134055384|emb|CAK43938.1| unnamed protein product [Aspergillus niger]
          Length = 524

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 115/539 (21%), Positives = 211/539 (39%), Gaps = 75/539 (13%)

Query: 1   MGKKT----KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           M K+         + P+G  D    +  +R+RI  +I ++++ +G   ++TP+ E  + L
Sbjct: 1   MPKEKESKLSFNLKTPKGTKDWSGSDALLRDRIFSTIADVFKRHGGTALDTPVFELREIL 60

Query: 57  GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
                ++   +K ++ LQD  G+  SLRYDLT P AR++A N D                
Sbjct: 61  AGKYGED---SKLIYDLQDQGGEICSLRYDLTVPFARWLAMNPDVRSMKRYHIAKVYRRD 117

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
                 GR R+F QCD D  G+          + +   +         Y+I IN+RKILD
Sbjct: 118 QPAVSKGRMREFYQCDFDIAGTFDPMVPDAEILRIVTEVFEELGWNGRYNIKINHRKILD 177

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ +  G+  +    +   +  A+DKLDK     V+  + E              L S  
Sbjct: 178 GVFQVCGVPEE----KIRPISSAVDKLDKMPWADVRKEMVEE-----------KGLDSAV 222

Query: 237 IDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            D + +++     + + +     E +    + + G  ++ ++ + +   G   ++I    
Sbjct: 223 ADKIETYVMHKGGRELLDNLLKDEGLTANESAKAGLEDMGLLMDYLEAFGVL-DKISFDM 281

Query: 294 TIVRGLEYYTGCVYEAILG------------------------------FPVMNEKQKPV 323
           ++ RGL+YYTG +YE +                                          +
Sbjct: 282 SLARGLDYYTGVIYEVVTEGSAPAVASSAPEAQAVQKSGKKSKSKGGNLEDDDRSNDPTL 341

Query: 324 VFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVA----LKSLESSTNNIKEMGPV 378
             GSV  GGRYD LV  F     +P  G S G+ R+       L+  +S+          
Sbjct: 342 GVGSVAAGGRYDNLVGMFLPKAQIPCVGVSFGVDRIFSITKARLEREKSAEALRSSEVDA 401

Query: 379 LITTMDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            +           L +     Q L  +G++AE           Q K A++   P A+I G
Sbjct: 402 YVMAFGGKGFTGMLKERMSVCQTLWNSGVKAEFSYKVKPKLPQQFKAAEQAGVPFAVILG 461

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
             E + G +++K++         +++    +E     + + ++ L + VK  + + + E
Sbjct: 462 EDELAAGKVRVKEM--------GLEDGHPEKEG----VLVDLTALPAEVKARVAKKRGE 508


>gi|219130551|ref|XP_002185426.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403140|gb|EEC43095.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 438

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 124/487 (25%), Positives = 213/487 (43%), Gaps = 59/487 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++ +G  D   +++ IR    + IR ++E++G   I+TP+ E  D+L     ++   +K 
Sbjct: 1   KIAKGTRDYLPEQMMIRQEAFNIIRRVFESHGAVEIDTPVFELKDTLTGKYGED---SKL 57

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRFRQ 127
           ++ L D  G+ ++LRYDLT P AR+++      V   + + IG V+R ++     GR+R+
Sbjct: 58  IYDLADQGGELLALRYDLTVPFARFLS---LNSVGNIKRFHIGKVYRRDQPQLNRGRYRE 114

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G+         C+ +A  +    +   D+ I +N+R++LD IL+  G+  D
Sbjct: 115 FYQCDFDIAGTYGRMVPDSECLCVACDILD-ALPIGDFGIKLNHRRLLDAILDLCGVPAD 173

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--- 244
               +   +  A+DKLDK     VK  + E              L     D + +F+   
Sbjct: 174 ----KFRTICSAVDKLDKEAWSEVKREMVE-----------DKGLPESVADKIGTFVLNK 218

Query: 245 --SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
               D+ KS+ +            +   +L ++ E +         I    ++ RGL+YY
Sbjct: 219 GPPWDMYKSLMDGNR-FGNHKGANEAMEDLRILFEYLEAMDKLK-FISFDLSLARGLDYY 276

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIV 360
           TG +YEA+               GS+GGGGRYD LVS F+   +  P  G S+GI R+  
Sbjct: 277 TGVIYEAVCMSGEA-------QVGSIGGGGRYDNLVSMFQEAGKQTPCVGVSVGIERVFT 329

Query: 361 ALKS-LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            +++ L        +   V I         + +     ++L    + AE     +     
Sbjct: 330 LMEARLREQQGGSIKRANVNILIAAAGGTMMKEKMRIARILWDNKLSAEFSQQENAKLKK 389

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +L+ A  R+ P  +I G  E +   + +KDL    E                    +PI 
Sbjct: 390 ELQNALDRDIPFMVIVGEEELAESKVTVKDLKAKTE------------------HKVPID 431

Query: 480 ELVSTVK 486
           ELVST++
Sbjct: 432 ELVSTLR 438


>gi|224068773|ref|XP_002326196.1| predicted protein [Populus trichocarpa]
 gi|222833389|gb|EEE71866.1| predicted protein [Populus trichocarpa]
          Length = 441

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 128/461 (27%), Positives = 210/461 (45%), Gaps = 39/461 (8%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+    P+G  D P +E+R+R+ +  + R +   +GF+ ++ P+LE      +   +E 
Sbjct: 19  QKIDVNPPKGTRDFPPEEMRLRSWLFHNFREVSRLFGFEEVDYPVLESEALFIRKAGEEI 78

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           R    ++  +D   + ++LR +LT  LAR V +   ++  P + + IG  +R E+   GR
Sbjct: 79  RD--QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSLSLPLKWFAIGQCWRYERMTRGR 136

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK-ILDGILEKIG 183
            R+  Q ++D +G    TA+AE+   +    + +GI  +D    +N+RK +L  IL    
Sbjct: 137 RREHYQWNMDIIGVPEVTAEAELISSIVTFFKQIGISASDVGFKVNSRKVVLQEILRSYS 196

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           L      N    V   IDK++K  +  +K  L                +  E ++ ++  
Sbjct: 197 LSE----NLFAKVCVIIDKIEKIPIDEIKKELN------------SVGMPQEGVNKLLEV 240

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LSI   KS+ EL E++ G     +   +L  +  L  K GY S  I+  +++VRGL YYT
Sbjct: 241 LSI---KSLSELEEILGGAG---EAIADLKQLFSLAEKFGY-SEWIQFDASVVRGLAYYT 293

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+E            +     ++ GGGRYD L+S F G ++PA GF  G + +I  LK
Sbjct: 294 GIVFEGF---------DRAGKLRAICGGGRYDRLLSTFGGDDLPACGFGFGDAVIIELLK 344

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                   I +   V       D D          MLR  G   ++ L  SK      K 
Sbjct: 345 EKGILPELIPQ---VENIVCALDHDLQGAAATVATMLREKGQSVDLVL-ESKPLKWVFKR 400

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           A R N    I+ G  E  +GM+ +K L+ G++   +I   E
Sbjct: 401 AARINAQRLILVGNTEWKKGMVSVKILSSGEQSEIKIDELE 441


>gi|319775764|ref|YP_004138252.1| histidyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317450355|emb|CBY86571.1| histidyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 423

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 101/475 (21%), Positives = 191/475 (40%), Gaps = 56/475 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC   E  +   I   +RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ M+     +A+GI   D H+ +    I     
Sbjct: 116 PQKGRYRQFHQVGVEVFGIANPEIDAELIMLTYRLWKALGI---DQHVTLQLNSIGSLEA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E    L + ++ ++     +++L  +                 +    
Sbjct: 173 RANYRSALVGFLENHQDLMSDEEKERLVRNPLRILDTKN---------PELQKVLDNAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +      +L  L+                            + +I+  +VRGL
Sbjct: 224 LLDYLDDESRAHFEQLCSLLDA-----------------------VGIQYEINPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G   P+ GF++G+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATPSIGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +     N+     V I  +     +        + +R+    +   M   S  NF
Sbjct: 313 LLVQEVN---PNVPAKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNT-MLHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARV 471
             Q K AD+ +  LA++ G  E     + +K L  G  + + ++ N   + + + 
Sbjct: 369 KKQFKRADKSSATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYLQTQF 423


>gi|240171984|ref|ZP_04750643.1| histidyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 420

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 96/474 (20%), Positives = 183/474 (38%), Gaps = 68/474 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              P+G  D    +      + D + +     G+  IE P+ E +    + + +  D  +
Sbjct: 4   FSAPKGVPDYYPPDSAQFVAVRDGLLSAARRAGYGYIELPIFEDTALFARGVGESTDVVS 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+R
Sbjct: 64  KEMYTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGALPVKLSYAGPFFRYERPQAGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  V+ +G      DAE+  +      A+G            D       R++L   
Sbjct: 124 QLQQVGVEAIGVDDPALDAEVIAVADAGFRALGLEGFRLEITSLGDETCRPQYRELLQEF 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  + L  + +   +L  LR +D         V+ +  +                     
Sbjct: 184 LFGLDLDEETRRRAQLNPLRVLDDKRP----AVRAMTAD-------------------AP 220

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +++  LS   ++    +   +                               I++ +VRG
Sbjct: 221 VLLDHLSDTAKQHFDTVLSHLDAL-----------------------GVPYVINARMVRG 257

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E +                 +GGGGRYDGL+ +  GQN+   GF +G+ R 
Sbjct: 258 LDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMRQLGGQNLSGIGFGLGVDRT 309

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++   +           +  +     +  K  +    LR +G+R ++  G  +   
Sbjct: 310 LLALRAEGKNVGETTRCD---VFGVPLSEQAKLKLAVLAAQLRASGVRVDLAYG-DRGLK 365

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             ++ ADR    +A++ G  +    M+ +KDLA G ++S  + +  +   +R+A
Sbjct: 366 GAMRAADRSGARIALVVGDRDIEAAMVGVKDLATGDQVSVALDSVVAEVVSRLA 419


>gi|23015682|ref|ZP_00055451.1| COG0124: Histidyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 412

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 96/469 (20%), Positives = 164/469 (34%), Gaps = 74/469 (15%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D    E R   R+ +   +    YGF  I TP+ E++D   + L +  D   
Sbjct: 4   LQPVRGTHDLLPDESRRHRRVEEIAFSAARRYGFGEIMTPIFEFTDVFARTLGETSDVVT 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++  D  G+ I+LR + TA +AR           P + +  GP+FR+E+   GR RQ
Sbjct: 64  KEMYTFSDRSGESITLRPEGTAGVARAFISGGLAQSLPLKLFYRGPMFRHERPQKGRLRQ 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGI 178
           F Q  V+ +G  +  AD E+  +    L  +G             D       R  L   
Sbjct: 124 FHQVGVELLGVESPLADVEVIALAWRVLSELGLASKVRLEINTLGDAESRETYRNTLVAY 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L +      +            D  ++     +++L  +   D      + A L ++ + 
Sbjct: 184 LSEFREALSE------------DSRNRLERNPLRILDSKDEGDR--RIVENAPLMNDSLS 229

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                                               +++ +   G       ++S +VRG
Sbjct: 230 P---------------------------AAREFFAQVTDGLHALGIP---FVLNSRLVRG 259

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY    +E                 G+V  GGRYD L++   G   P  G++ G+   
Sbjct: 260 LDYYCHTAFEFTTTE--------LGAQGTVLAGGRYDELIATMGGVRTPGIGWAAGV--- 308

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                   S            I+ +           +  + LR  G   EM  G S N  
Sbjct: 309 -----ERLSMLVGDIPDTVRPISVIPMGDAV--AAMVVAERLRRMGCNVEM--GFSGNMK 359

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            ++  A++ N   A+I G  E +R  + I+DL    +    +   E   
Sbjct: 360 KRMARANKVNARFAVILGEEESARKAVTIRDLDTSTQDEVPLAQLEEHL 408


>gi|291277183|ref|YP_003516955.1| putative histidyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964377|emb|CBG40227.1| putative histidyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 440

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 131/450 (29%), Positives = 223/450 (49%), Gaps = 26/450 (5%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
                 GF D   KE   + ++L  +  ++E++GF PIETP +EY++ L K         
Sbjct: 4   TPRTLSGFRDHLPKEAIAKEKLLKKVTQVFESFGFVPIETPHMEYAEVLIKQG--SKEIQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++  QD  G+ ++LR+D T PLAR++++  + +  P + Y +G VFR E+   GR+R+
Sbjct: 62  KELYRFQDHGGRDVALRFDQTVPLARFISQYRNELPLPFKRYVVGNVFRGERAQRGRYRE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D +GS++   DAE+  ++  ++ ++G    D+ I +N+R IL+GI +  G+  +
Sbjct: 122 FTQCDFDFIGSNSIACDAEIIQVIYASMLSLG--IEDFTIWLNHRSILNGICQYFGIKEE 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +    LR IDK+DK G +GV   L E       D T  A L +  I       + D
Sbjct: 180 ---TDIQNALRIIDKIDKIGPEGVSAELKE--ALRLTDKTIEALLKTTSIKQ-----TQD 229

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            E+   E+  + +     +KG  EL  + ++++    + +  +++ +I RGL YYTG +Y
Sbjct: 230 KEEFFAEIAPMKQWNAELKKGIEELEQMYQILQDLEMDKSSYRVNFSIARGLAYYTGIIY 289

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E  +         +    GSV  GGRYD L   F  +++   G SIG+ RL+V L+ L  
Sbjct: 290 ETTIT--------RLKSLGSVCSGGRYDNLTKTFSKESMSGVGASIGLDRLLVGLEDLGL 341

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
            +          I  +  +   LS      +  R + +  E++   +K    QL YAD++
Sbjct: 342 LSQK---STTARILIICTNEKYLSLAHRIAESFRRSEVNTEVYPEITK-LKKQLSYADQK 397

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
               ++I G  E     L +K++  G +L 
Sbjct: 398 GHEFSVIIGEEEYKNRALTLKNMTTGIQLD 427


>gi|50552956|ref|XP_503888.1| YALI0E13123p [Yarrowia lipolytica]
 gi|49649757|emb|CAG79481.1| YALI0E13123p [Yarrowia lipolytica]
          Length = 547

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 132/536 (24%), Positives = 219/536 (40%), Gaps = 75/536 (13%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  K   ++P+G  D   K++ +R  I D++  +++ +G   I+TP+ E  + L     
Sbjct: 38  KKAVKYELKVPKGTKDWADKDMVVREAIFDTLAKVFKRHGAVTIDTPVFELREILAGKYG 97

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR----TYRIGPVFRN 117
           ++   +K +++L+D  G+  SLRYDLT P AR+VA+N    +          R  P    
Sbjct: 98  ED---SKLIYNLEDQGGELTSLRYDLTVPFARFVAQNGIQAIKRYHIAKVYRRDQPAMTK 154

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
            +        F    V           AE   +  + L ++GI   ++ I +N+RKILDG
Sbjct: 155 GRMREFYQCDFDVAGVYPTMIPD----AECLAIAVEGLTSLGIT--NFTIKLNHRKILDG 208

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I +  G+  +D       V  A+DKLDK     VK            +         E  
Sbjct: 209 IFQVCGVKEED----VRKVSSAVDKLDKAPWADVKK-----------EMCVEKGQPEEVA 253

Query: 238 DIMVSFLSIDLE-KSMHELYE---LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           D +  ++      K M E  E    +    + + G  E+      +   G   N +    
Sbjct: 254 DKIGEYVQHKGSVKDMLEWLEGDAALMANESAKTGIEEMRTALPFMESFGIT-NYLSFDM 312

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKP--------------------------VVFGS 327
           ++ RGL+YYTG +YEA+        +++                           V  GS
Sbjct: 313 SLARGLDYYTGIIYEAVTEASAPPTEEQKAALKAAAEKDGKKKKKSKDDDDNSENVGVGS 372

Query: 328 VGGGGRYDGLVSRFKGQ----NVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITT 382
           +  GGRYD LV  F       N+P  G S G+ RL   +KS              V + +
Sbjct: 373 ILAGGRYDNLVGMFANNSKKGNIPCVGVSFGVERLFSLIKSRPGLMEKVRPAATQVYVMS 432

Query: 383 MDHDSDS---LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           M    +    L++    T  L  AGI AE    +   +  Q   A++  CP A+I G  E
Sbjct: 433 MGGGPEYTGFLAERMAVTHKLWEAGIEAEYMYKTKPKYPQQFTAAEKAGCPFAVILGQDE 492

Query: 440 RSRGMLQIKDLAKGKE----LSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             +G+++IK+L  G+E       +I++     + ++A  T      V  V+K+L++
Sbjct: 493 YPQGLVKIKELGLGEESDRGTDVKIEDLAQILKEKIANKTSS----VGEVQKLLKD 544


>gi|255023635|ref|ZP_05295621.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 400

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 181/447 (40%), Gaps = 51/447 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFS 72
           G  D   +E+   + +    +N+ ENY ++ I TP+ E+++   + + D  D  +K +++
Sbjct: 1   GTRDILPEEVSKWHFLETEFKNVCENYQYEEIRTPVFEHTELFERGVGDSTDIVSKEMYT 60

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   GR RQF Q
Sbjct: 61  FQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGGRQRQFTQ 120

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKIGLHGDDK 189
             ++ +GS   + D E+  +     + +G+      I     K       E +  H +  
Sbjct: 121 MGIEALGSDDPSIDVEVISLAMTFFKKIGLTNIKLVINSLGDKESRLKHREALVAHFEPH 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           ++E        +   +     +++L  +   D         N   +    ++ FL+ +  
Sbjct: 181 IDEF-----CAECQVRLHKNPLRILDCKKDHD---------NPLIQSAPSILDFLNEESV 226

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                +   +                              +I  T+VRGL+YY    +E 
Sbjct: 227 AYFENVKNYLNALE-----------------------IPFEIDPTMVRGLDYYNHTTFEI 263

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           +        K       ++ GGGRY GLV  F G + P  GF IG+ R+++AL+  +   
Sbjct: 264 MSVEEGFGAK------TTLCGGGRYHGLVREFGGPDTPGIGFGIGVERILLALEKADI-- 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
             I    P+ +  +    ++  K       LR   +  +      + F  QLK A+R+N 
Sbjct: 316 -EIPAKKPLEVYVITAQPEAELKAVTLXNKLRQKALVQKKDY-LKRKFKAQLKDANRKNA 373

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKEL 456
              II G  E   G  Q+K++  G++ 
Sbjct: 374 VYTIILGEEELQTGNYQLKNMETGEQE 400


>gi|160872440|ref|ZP_02062572.1| histidyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121239|gb|EDP46577.1| histidyl-tRNA synthetase [Rickettsiella grylli]
          Length = 427

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 108/484 (22%), Positives = 190/484 (39%), Gaps = 65/484 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    +  I   +   +RN+   YG+  I  P+LE +D   + +    D  
Sbjct: 4   KIQAIRGMNDILPAQNFIWQNVEKVLRNLVNQYGYQEIRLPILEKTDLFKRCIGHVTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G+ +SLR + TA   R   E+        R + +GP+FR+E+   GR+R
Sbjct: 64  EKEMYTFIDRNGESLSLRPEGTAGCVRAGVEHGLFYNQIQRWWYLGPMFRHERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+  G +    DAE+ +M A   + + +        ++      G LE    H 
Sbjct: 124 QFHQWGVEVFGIAQAYIDAELILMTARFWKELKLMH-----QLHLEINSLGSLEARKAHK 178

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +  +N     L  +D+  K  LQ   L + + +               E+   ++ +L  
Sbjct: 179 ESLINYFAQHLNDLDEDSKRRLQTNPLRILDSKNPALQSLI-------EKAPQLLDYLDA 231

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + ++  + L E++K                              I+  +VRGL+YY   V
Sbjct: 232 ESQQDFNSLQEILKNA-----------------------DINFTINPRLVRGLDYYNKTV 268

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E ++         +     +V  GGRYD LV +  G   PA GF+IG+ RL+       
Sbjct: 269 FEWVIVDK------QHTAQNTVCAGGRYDYLVEQLGGHPTPAAGFAIGMERLVS-----L 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN-FGNQLKYAD 425
            S  +        +  +     ++ K  + +  LR   I   + L  +++    Q K AD
Sbjct: 318 LSPLSSTASHLPDVYFITMGDIAIQKGIILSDYLRENLITIRLILDVTRDAIKTQFKRAD 377

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           +     A+I G  E     L IK+L                   R  Q TI    ++  +
Sbjct: 378 KSGARFALILGENEVKSNTLIIKNLK-----------------ERNPQETISQDHVIQKL 420

Query: 486 KKIL 489
           ++ L
Sbjct: 421 RECL 424


>gi|121604775|ref|YP_982104.1| histidyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120593744|gb|ABM37183.1| histidyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 456

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 91/475 (19%), Positives = 177/475 (37%), Gaps = 64/475 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    +      + D +R +   Y +  I TP+LE++    + + +  D  
Sbjct: 20  KLAAVKGMNDILPPDSARWEWLEDKVRGLMGRYAYRNIRTPILEHTQLFVRGIGEVTDIV 79

Query: 67  NKGVFSLQDDDGQ-----WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            K ++S +D   +      +++R + TA + R V E+        R Y +GP+FR E+  
Sbjct: 80  EKEMYSFEDRSDKHGDHDHLTMRPENTASVVRAVTEHNLLYDGGKRLYYMGPMFRRERPQ 139

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+RQF Q   + +G +    DAE+ ++ A   + +G+      I              
Sbjct: 140 RGRYRQFHQIGAEALGFAGPEVDAELILLAAALWKELGLTDWRLEINSLG---------- 189

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                +++   R  ++   ++      +  +  L                   E    ++
Sbjct: 190 ---QPEERAQHRAQLIAHFEQHADALDEEARRRLHSNPLRILDTKNPAMKAVVESAPRLI 246

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL          L  ++                          S    ++  +VRGL+Y
Sbjct: 247 DFLGSQSLAHFEGLKAILDAN-----------------------SIPWTLNHRLVRGLDY 283

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +          +    G++  GGRYD L+ +  G+  PA G+++G+ R++  
Sbjct: 284 YNLTVFEFVT--------DRLGAQGTICAGGRYDYLIEQMGGKPAPAVGWALGVERVLEL 335

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF----LGSSKNF 417
           +K   +    + E        +  ++ +L       Q LR AGI  +M          + 
Sbjct: 336 IKEQGA----LVEHPVPDAYAVIPEASALPVVLQTLQALRAAGISVQMHASATPEGMGSM 391

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK------ELSREIKNNESW 466
            +Q K AD      A+I G  E + G + +K L   K      +  + + +  +W
Sbjct: 392 KSQFKRADGSGARFALIFGADELAEGRVAVKPLRSEKAGSAQAQTLQPLNDVAAW 446


>gi|90408606|ref|ZP_01216761.1| histidyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310298|gb|EAS38428.1| histidyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 423

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 102/476 (21%), Positives = 193/476 (40%), Gaps = 74/476 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG  D    +  +  ++   +R +  +YG+  I  PL+E +    + +
Sbjct: 1   MAK----KIQAIRGMNDTLPDQTPVWQKLESLLRQVVSSYGYSEIRMPLVESTALFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  DD+G  ++LR + TA   R   E+        R +  GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTF-DDNGDSLTLRPEGTASCVRAGNEHGLLYNQERRLWYTGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G ++   DAE+ ++ A   +A+GI  +     +       R  
Sbjct: 116 PQKGRYRQFHQFGVETFGMASADIDAEVILLSARLWKALGINEHVELQINSLGSNVARAA 175

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
              +L       +D+L+E        D   +     +++L  +            A   S
Sbjct: 176 YKEVLVAFLEKHEDQLDE--------DSKRRMKTNPMRVLDSK--NPQVQALLVDAPKLS 225

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E +D                           ++       + + +  +G    +  I+  
Sbjct: 226 EHLD---------------------------DESVEHFKQLQKYLDAAG---IKYVINER 255

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G++  GGRYDGLV +  G++ PA GF++G
Sbjct: 256 LVRGLDYYNRTVFEWVTSS--------LGAQGTICAGGRYDGLVEQLGGKSTPAVGFAMG 307

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE------ 408
           + R+++ L  LE + +   ++    +       ++        ++     IR E      
Sbjct: 308 LERIVLMLNELELNKDIASDVDIYSVLV---GENTDLAGFKMAEI-----IRTELPHLKM 359

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNN 463
           M    + NF  Q+K AD+    LA+I    E     + IKDL+    + + ++ + 
Sbjct: 360 MHHCGAGNFKKQMKRADKSGARLALIIAEDELQGNSVTIKDLSGKIDQQTVDMDSL 415


>gi|167756851|ref|ZP_02428978.1| hypothetical protein CLORAM_02400 [Clostridium ramosum DSM 1402]
 gi|167703026|gb|EDS17605.1| hypothetical protein CLORAM_02400 [Clostridium ramosum DSM 1402]
          Length = 425

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 111/470 (23%), Positives = 191/470 (40%), Gaps = 60/470 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   ++      +   IR I  NY    + TP+ E+++   + + D  D 
Sbjct: 1   MMYKAPRGTVDILPEKSAKWQTLEQLIRTICANYNVKEVRTPIFEHTELFTRAVGDTTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++  D  G+ I+LR + TA +AR   EN          + Y IGP+FR E+   G
Sbjct: 61  VSKEMYTFADKKGRSITLRPEGTAGVARAYVENKMFSNPDKISKLYYIGPMFRYERPQNG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGIL 179
           R RQF Q  V+ +G  +   D E   M    +EA+G++    HI      ++R      L
Sbjct: 121 RQRQFHQFGVEMIGYESPYLDVECMTMAVTLVEALGLQGVKLHINTLGDGDSRDAYREAL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +       D L          D  +++    +++L  + + D++      A         
Sbjct: 181 KAHFAPYLDDL--------CQDCKNRYEANPLRIL--DCKVDHNHPAMANA-------PK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            V +LS   +    ++ EL+                               + + +VRGL
Sbjct: 224 TVDYLSEAAKAHFTKVCELLDDLE-----------------------IEYVVDTNLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E I      ++  +     +VGGGGRY+GLV    G   P  GF+ G+ RL+
Sbjct: 261 DYYCHTVFEVI------SDDPRLGAGATVGGGGRYNGLVQELGGPEAPGVGFAFGMERLL 314

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +A+         ++E   + +  M    ++       T MLR  G   +M     ++   
Sbjct: 315 IAMDE------ELEEPEGLDVYVMPMGDEARDLAVQITAMLRANGFSVDMDY-QGRSLKA 367

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           Q K  DR N   A+I G  E +  ++ IK      +    I+N  ++ E 
Sbjct: 368 QFKTVDRLNSHFAMIIGDQEIADEVVNIKCTHSKTQDIVPIENIVAYIEN 417


>gi|94263257|ref|ZP_01287073.1| Histidyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
 gi|93456340|gb|EAT06464.1| Histidyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
          Length = 417

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 91/479 (18%), Positives = 183/479 (38%), Gaps = 66/479 (13%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +  +GF D    E+     I    R ++  +GF  I  P+LE +    + + +  D   K
Sbjct: 2   QALKGFKDILPDEVASWQLIEQRARELFARFGFAEIRVPILEKTKLFARSIGEATDIVEK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRI-GPVFRNEKHGPGRFRQ 127
            +++  D +G  +++R + TA + R   E+   +  P       GP+FR+E+   GR RQ
Sbjct: 62  EMYTFTDRNGDSLTMRPEGTASVLRAFIEHSLHLRQPLNKLYTIGPMFRHERPQKGRLRQ 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+ +GS     DAE+  +       + +  +     +          +++     
Sbjct: 122 FHQLSVEALGSEHPRLDAEVIALAWSLAAELELNVSLELNSLGCPACRPAYRQRLVDFLQ 181

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +  +        D   +     +++L  + +     +          +   ++  L   
Sbjct: 182 ARRTQL-----CEDCQRRIDSNPLRVLDCKSQHCRQANA---------EAPAILDSLCAA 227

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            ++ +  +   ++                         +   +++  +VRGL+YY+   +
Sbjct: 228 CDEHLAAVRHDLEAL-----------------------AIPYRLNPFMVRGLDYYSRTTF 264

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +                +VG GGRYDGLV +  G ++P  GF++G+ RL++ L++   
Sbjct: 265 ELLT--------DDLGSQSAVGAGGRYDGLVKQLGGPDLPGIGFAMGMERLVLLLQNQRR 316

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
            T    E     +        +           R  G+RA M +   +   NQ+K ADR 
Sbjct: 317 LTPPGPE-----LFIAALGEAAADFAFALLHNCRRQGLRAVMDV-QGRGLKNQMKQADRL 370

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                +I G  E +RG   ++D+    E    + +               +SEL++T++
Sbjct: 371 GAAHVLIIGEDELNRGRATLRDMGSKLETDVLLSDE-------------DLSELIATIR 416


>gi|21242570|ref|NP_642152.1| histidyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|32130119|sp|Q8PLH2|SYH_XANAC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|21108029|gb|AAM36688.1| histidyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 478

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 146/511 (28%), Positives = 234/511 (45%), Gaps = 69/511 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQD----------------DDG-QWISLRYDLTAPLARYVAENFDTIVFPCRT 108
               V+ +Q                 + G   ++LR+DLT PLARYVAE+   + FP R 
Sbjct: 62  ---QVYFVQSTGALANAAAAADEGAENGGLPELALRFDLTVPLARYVAEHEHDLSFPFRR 118

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ + 
Sbjct: 119 YQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQ 178

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           +NNRK+L G  E +G+   +    +L VLR +DK+DK G   V+  L            +
Sbjct: 179 LNNRKLLRGFFESLGVAEGE---LQLAVLREVDKIDKRGADYVRDTL----------VGE 225

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRKS 282
           G  + +EQ+  +++F+++        L +L      V  +    +G  EL  + ELV+  
Sbjct: 226 GFGIPAEQVARILAFVAVRSNGHADALAQLQALEGSVGASATLGEGIAELREVLELVKAL 285

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   +   ++ +I RGL+YYTG VYE  L              GS+  GGRYD L S + 
Sbjct: 286 GVPESAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYDSLASHYT 337

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +P  G SIG++RL   L+         +     ++  M  D   L       + LR 
Sbjct: 338 KSKLPGVGISIGLTRLFWQLREAGLIQGIAESSVQAMVALM--DETRLDDALDIARRLRI 395

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            GI  E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL   ++       
Sbjct: 396 GGINTEVQM-EPKKIGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ------- 446

Query: 463 NESWREARVAQITIPISELVSTVKKILQENK 493
                     Q  +   EL ST++  L++ +
Sbjct: 447 ----------QFDVARDELASTLQVELEQAR 467


>gi|320580230|gb|EFW94453.1| histidyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 531

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 127/526 (24%), Positives = 217/526 (41%), Gaps = 71/526 (13%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            +   + P+G  D   K++ IR  I + + ++++++G   I+TP+ E  + L     ++ 
Sbjct: 30  QQFNLKTPKGTKDWADKDMIIREAIFNKLTSLFKSHGGVTIDTPVFELREILAGKYGED- 88

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K +++L+D  G+  SLRYDLT P ARYVA N  + +          V+R ++    +
Sbjct: 89  --SKLIYNLEDQGGELTSLRYDLTVPFARYVAMNGISNIKRYHI---AKVYRRDQPAMTK 143

Query: 125 FRQFIQCDVDN-VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
            R       D  +  S ++   +  +M        G+   D+ I +N+RKILDGI +  G
Sbjct: 144 GRMREFYQCDFDIAGSYDSMVPDAEIMNILVSGLTGLGIKDFKIKLNHRKILDGIFQVCG 203

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  +D       V  A+DKLDK     VK  + E             N   +  D +  +
Sbjct: 204 VKEED----VRKVSSAVDKLDKSPWDAVKKEMCEE-----------KNQPEDVADKIGEY 248

Query: 244 LSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + I+       +       +    + ++G +E+  +++ V       + I    ++ RGL
Sbjct: 249 VKINGTLRDVLAKLSSDPTLMANESAKQGIDEITTMADYVEAF-EVDHYISFDMSLARGL 307

Query: 300 EYYTGCVYEAILGFPVMN------------------EKQKPVVFGSVGGGGRYDGLVSRF 341
           +YYTG +YEA+                         +  + V  GS+  GGRYDGLV  F
Sbjct: 308 DYYTGVIYEAVTSQSAPPKDAAEKKARVKKSKKDDEDASEYVGVGSIAAGGRYDGLVGMF 367

Query: 342 --------KGQNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---S 389
                   K  ++P  G S G+ RL   +K   E +         V +            
Sbjct: 368 LGTNSKGKKAPSIPCVGVSFGVERLFSLIKQRAELADKIRASSTQVYVMAFGGGEGWNGF 427

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +       L  AGI  E    +  N   Q + A++  CPLA+I G  E  +G +++K 
Sbjct: 428 LKERMAVAAKLWKAGIECEYLYKAKANPRKQFEAAEKSGCPLAVILGKEEYPQGQVRVKV 487

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           L  G E                    + I +LV  VK+ L++ K +
Sbjct: 488 LGTGNEKD--------------DGELVSIGDLVEVVKQRLEDQKHD 519


>gi|268317174|ref|YP_003290893.1| histidyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334708|gb|ACY48505.1| histidyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 436

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 104/497 (20%), Positives = 180/497 (36%), Gaps = 88/497 (17%)

Query: 7   LRAELPRGFADCPTKE----------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
                 RG  D   ++           R    +   +R + E + F  I TP+LE ++ +
Sbjct: 5   PTFRNIRGTFDILPQDGRSEGAHDMPSRAWQHVEQVVREVLERFNFREIRTPILEPTELI 64

Query: 57  GKFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPV 114
            + +    D  +K +F+ +        LR ++TAP+ R   ++         + Y IGP 
Sbjct: 65  ARGVGQLTDIVSKEMFAFR-RGDTNYVLRPEVTAPVMRAYLQHRLDQQGAVQKLYYIGPC 123

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----N 170
           FR E    GR+RQF Q  V+ +G+    ADAE+   M    EA G+K     I       
Sbjct: 124 FRAENPQKGRYRQFHQFGVELIGAETPEADAEVIAAMMAVYEAFGLKNLRLRINTLGDAE 183

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           +R      L        D+L              +     +++L  +   +         
Sbjct: 184 SRPRYREALRAYLQPLADRLTPTSRQ--------RLETNPLRILDTKDERER-------- 227

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               E    ++ F+          +   ++      +                       
Sbjct: 228 -RLLEGAPRIIDFVDEKGRAHYEAVKAHLQALGIAFE----------------------- 263

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-NVPAT 349
               +VRGL+YYT   +E         E        ++ GGGRYD L         VPA 
Sbjct: 264 EDPFLVRGLDYYTHTTFEL--------ESPDLGAQSALAGGGRYDLLAMDLGHDAPVPAV 315

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF+ GI RL +AL++         E  P+    +    +++ +  +  Q LR AG+R ++
Sbjct: 316 GFAAGIERLFIALQAQG---YAFPEEPPLDAYLVSLGEEAMRRALVEAQALRRAGLRVDL 372

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            L   ++   Q++ A+R+    A+I G  E + G   ++D+  G                
Sbjct: 373 DLK-GRSMKAQMREANRQQARYAVIMGERELAEGRAVVRDMQSG---------------- 415

Query: 470 RVAQITIPISELVSTVK 486
              Q  +P+ EL   +K
Sbjct: 416 --QQQEVPLDELADFLK 430


>gi|302550150|ref|ZP_07302492.1| histidyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302467768|gb|EFL30861.1| histidyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 420

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 95/474 (20%), Positives = 175/474 (36%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I     N G+  IETP  E  +   + + +  D  
Sbjct: 3   TFKAPKGTYDLIPPDSAKYLAVREAIAAPLRNSGYGYIETPGFENVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++ +   G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYAFETKGGDRLALRPEGTASVLRAALEANLHKAGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G            D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELLILADQAYRSLGLSDFRILLNSLGDSECRPVYRTALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  D      +  LR +D       + V+  LGE                   
Sbjct: 183 DFLRGLDLDEDTLRRAEINPLRVLDDK----RESVQKQLGE------------------- 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+ EL+       +   +L                       V
Sbjct: 220 APLLRDYLCDACKAYHEEVRELITAAGVAFEDDPKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++       ++      +  +    ++          LR  GI A+   G  K 
Sbjct: 309 RTVLALEAEGV---ELELPATTSVFAVPLGEEARRVLFAKVTELRKNGIAADFSYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R      ++ G  + + G++Q+KD+  G++ +  +    +  EAR
Sbjct: 365 LKGAMKNANRSGARYTVVAGERDLAEGVVQLKDMESGEQTAVGVNEIVAELEAR 418


>gi|225559000|gb|EEH07283.1| histidyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 537

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 119/532 (22%), Positives = 212/532 (39%), Gaps = 70/532 (13%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           MGK+      + P+G  D    +  +R+RI ++I  +++ +G   ++TP+ E  D L   
Sbjct: 1   MGKEKVSFNLKTPKGTKDWFGADGLLRDRIFNTITEVFKRHGATSLDTPVFELRDILAGK 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N +                   
Sbjct: 61  YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPNIRNVKRYHIAKVYRRDQPA 117

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGI 178
              GR R+F QCD+D  G++ +    +  ++   T    G   +  Y I +N+RK+LDG+
Sbjct: 118 MSKGRMREFYQCDIDFAGANFDPMVPDAEILRIATEVFEGLGWKGRYTIKVNHRKVLDGL 177

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E  G+  +    +   +  A+DKLDK     V+  + +              L     D
Sbjct: 178 FEVCGVPKE----KIRTISSAVDKLDKMPWVDVRREMVDE-----------KGLDGNVAD 222

Query: 239 IMVSFLSIDLEKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            + +++     + +    +  E +      + G  E+ ++ + +   G   ++I    ++
Sbjct: 223 KIETYVIRKGGRELVESLQKDEALLANSYAKTGLEEMALLLDYLEAFGIL-DKISFDMSL 281

Query: 296 VRGLEYYTGCVYEAILGFPV----------------------------MNEKQKPVVFGS 327
            RGL+YYTG +YE +                                        +  GS
Sbjct: 282 ARGLDYYTGVIYEVVTEGSAPAAAPPTGEEAQNIRKKSKGKAMHDDDDDRSNDPSIGVGS 341

Query: 328 VGGGGRYDGLVSRFK-GQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDH 385
           V  GGRYDGLV  F     +P  G S G+ R+    K+ +E   +   ++  V +  M  
Sbjct: 342 VAAGGRYDGLVGMFSSRAQIPCVGISFGVDRIFSITKARMERENSVANKICDVDVYVMAF 401

Query: 386 DSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
                   L++     + L  AGI+ E           Q + A+    P A+I G  E +
Sbjct: 402 GGKGFTGLLNERMDVARRLWDAGIKVEFSYKRKPKPIQQFEAAEANAVPFAVILGEDELA 461

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            G +++K++                       + + +S L   VK  L+  K
Sbjct: 462 AGKVRVKEM------------GLDKGHPEKDGVLVNVSTLAEEVKSRLERKK 501


>gi|255947130|ref|XP_002564332.1| Pc22g02880 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591349|emb|CAP97576.1| Pc22g02880 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 517

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 117/533 (21%), Positives = 202/533 (37%), Gaps = 70/533 (13%)

Query: 1   MGKKT--KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           MGK        + P+G  D    +  +R+RI  +I N+++ +G   ++TP+ E  + L  
Sbjct: 1   MGKDKGPTFNLKTPKGTKDWSGSDALLRDRIFTTIANVFKRHGGTALDTPVFELREILAG 60

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++   +K ++ L+D  G+  SLRYDLT P AR++A N D                  
Sbjct: 61  KYGED---SKLIYDLKDQGGEICSLRYDLTVPFARWLAMNPDVRSIKRYHIAKVYRRDQP 117

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
               GR R+F QCD D  G+          + +   +         Y I +N+RKILDG+
Sbjct: 118 AINKGRMREFYQCDFDIAGTFDAMVPDAEILRIVSEVFEELGWTGRYTIKLNHRKILDGV 177

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
               G+           +  A+DKLDK     V+  + +              L  E  D
Sbjct: 178 FAVCGVPDK----MLRPISSAVDKLDKMPWADVRKEMVD-----------DKGLDPEVAD 222

Query: 239 IMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            +  ++     + + +     E +      + G  E+ ++ + +   G   +++    ++
Sbjct: 223 RIEQYVMNKGSRELLDSLLKDETLNANAFAKAGLEEMALMMDYLEAFGVL-DKVSFDMSL 281

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVF---------------------------GSV 328
            RGL+YYTG +YE +       +   P                              GSV
Sbjct: 282 ARGLDYYTGVIYEVVTEGSAGVQADSPEAQKAEKSNKGKSKQPLEEEDRSNDPTLGVGSV 341

Query: 329 GGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVA----LKSLESSTNNIKEMGPVLITTM 383
             GGRYD LV  F+ +  +P  G S G+ R+       L+  + S           +   
Sbjct: 342 AAGGRYDNLVGMFQPKAQIPCVGISFGVDRIFSITKARLEREQKSDALRNSEVDAYVMAF 401

Query: 384 DHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
                +  L +     Q L +AGI+AE           Q K A++   P  II G  E +
Sbjct: 402 GGKGFNGMLKERMEICQKLWSAGIKAEFSYKLKPKLPQQFKAAEQGAIPFGIILGEEELA 461

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
            G  +IK++                       + + I+ LV  ++  L + ++
Sbjct: 462 AGKCRIKEM------------GLPEGHPEKEGVEVEIASLVPELQTRLAKKQQ 502


>gi|256830601|ref|YP_003159329.1| histidyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579777|gb|ACU90913.1| histidyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 417

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 94/472 (19%), Positives = 183/472 (38%), Gaps = 59/472 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K++     GF+D  + E  +   + +  R ++  YG   +  P+LE ++   + +
Sbjct: 1   MSKIQKIK-----GFSDLFSPESTVHTLMENLARQVFGTYGCQEVRVPILEKTELFARSI 55

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D  G+ +++R + TA + R   E+         + +  GP+FR E
Sbjct: 56  GEETDVVQKEMYTFADRKGRSLTMRPEATAGVLRAFIESGQCGAEGTTKLFACGPMFRYE 115

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR RQF Q DV+ +G+ A  ADAE+ +M+   L  +G+K     +          +
Sbjct: 116 RPQKGRLRQFHQLDVEVLGTDAPQADAEVVLMLWTFLTKLGLKNLGLELNSLGCPECRPV 175

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
                    D L          D   +     +++L  +                 E   
Sbjct: 176 F---HQRLRDFLATIDHTQLCEDCKRRAQTNPLRVLDCK---------VPACKSLVENAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   L    ++   ++ +++       +  + L                       VRG
Sbjct: 224 SIAESLCPGCDEHFAQVRDILDSAKLPYRLNDRL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY    +E +          +     +V GGGRYDGL+ +  G ++P  GF+ G+ RL
Sbjct: 261 LDYYQRTTFEVV--------SGEIGAQTAVAGGGRYDGLIKQLGGPDLPGIGFACGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            +             ++          DS +L+   +  Q +R  G   E+    +++  
Sbjct: 313 ALL--------YGQAQIPAPDFYLAVLDSRALNTALLLAQRMRERGFSGEVSF-EARSIK 363

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            Q++ A++      +I G  E  +G + +KD+A G + +    + E     R
Sbjct: 364 AQMRQANKLGVKTCLILGQDEMEKGQIVVKDMATGVQKNIGQDDLEQALGFR 415


>gi|168014390|ref|XP_001759735.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689274|gb|EDQ75647.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 426

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 109/459 (23%), Positives = 202/459 (44%), Gaps = 39/459 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P+G  D P +++R+R  + ++ R +   + F+ ++ PL+E  +   +   +E   
Sbjct: 5   ISTDPPKGTRDFPPEDMRLRTWLFNNFREVSRLFSFEEVDFPLVESEELYTRKAGEEIVG 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +++ +D  G+ ++LR +LT  LAR V +      +P + + IG  +R E+   GR R
Sbjct: 65  --QLYNFEDKGGRKVALRPELTPSLARLVLQKGRAQSYPLKWFAIGQCWRYERMTRGRRR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q ++D +G     A+AE+   +      +GI  ND  I ++NRK+L  +LEK  +  
Sbjct: 123 EHYQWNMDIIGVPG--AEAELLSAIVTFFTKLGITSNDVGIKVSNRKVLQAVLEKFNIPV 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D        V   +DKL+K   + ++  L +            A + S  ++ ++  LS+
Sbjct: 181 DS----FPAVCVIVDKLEKLPREEIEGELDK------------AGVPSNAVEGILKALSL 224

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                +    E + G  +G     EL  +  L    G   + +   +++VRGL YYTG V
Sbjct: 225 KSFDDL----EALIGAQSG--AVAELKQLFALAEGYGI-QDWLHFDASVVRGLAYYTGTV 277

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E            K     ++ GGGRYD L+S + GQ+ PA GF  G + ++  LK  +
Sbjct: 278 FEGF---------DKDKKLRAICGGGRYDRLLSTYGGQDTPACGFGFGDAVIVELLKEKK 328

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                   +  V    M  +             LR+ G   E+ +   K      K+ D 
Sbjct: 329 LLPVLPHVVDDV---VMALEDSLRVPAAGVAARLRSKGRVVELVIEKGKKMKWVFKHCDT 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
                 ++ G+ E  +G + +KDL   ++  + +     
Sbjct: 386 LKAKRLVLLGSTEWDQGKVNVKDLDAREQTLKTVDELIE 424


>gi|256074927|ref|XP_002573773.1| histidyl-tRNA synthetase [Schistosoma mansoni]
 gi|238658961|emb|CAZ30005.1| histidyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 535

 Score =  237 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 135/550 (24%), Positives = 232/550 (42%), Gaps = 100/550 (18%)

Query: 1   MGKKT------KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD 54
           M K +      K   + P+G  D    ++ I   +  +I   ++ +    I+TP+ E  +
Sbjct: 25  MAKSSIKQCEVKYNVKTPKGTRDRDPIQMTILEDVFSTIIRCFKRHDAVTIDTPVFELKE 84

Query: 55  SLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            L     +E   +K ++ LQD  G+ ++LRYDLT P ARYVA +    +   + Y+IG V
Sbjct: 85  VLAGKYGEE---SKLIYDLQDQGGEALALRYDLTVPFARYVAMHK---IKSIKRYQIGKV 138

Query: 115 FRNEKH--GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
           +R ++     GR+R+F QCD D         ADAE   +M + L  + +   D+ I IN+
Sbjct: 139 YRRDQPAMTRGRYREFYQCDFDIAGDHGLMLADAECLRIMYEVLSELNL--GDFVIKINH 196

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
           R++LDG+     +      N+ +    +IDKLDK   + V+  L E              
Sbjct: 197 RRLLDGLFSACDVP----SNKFVPACSSIDKLDKIPWEDVRRELCE-----------DKG 241

Query: 232 LTSEQIDIMVSFLSIDLEKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           L+ E  D + S++ +     +    E  E +    + +    E+ ++ +  +  G    R
Sbjct: 242 LSPEAADKIGSYVQLTGCLDLVERLESDEHLNNQPSAKVALQEMRLLLDYCKALGI-QER 300

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMN------------------------------- 317
           I    ++ RGL+YYTG +YEA+L     N                               
Sbjct: 301 ISFDLSLARGLDYYTGVIYEAVLKGFTYNPNSPSAELTGSNETDLNSSVKNKKSSKKDKK 360

Query: 318 ----------EKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVALKSL 365
                        + +  GSV GGGRYDGLV  F      VP  GFS G+ RL+   ++L
Sbjct: 361 AKEQLEEESVTSGESMAVGSVAGGGRYDGLVGMFSSSGTRVPCVGFSFGVERLLAIKEAL 420

Query: 366 ESSTNNIK---EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +S++  K         +         + +     Q+L  A I+A M   +     +QL+
Sbjct: 421 SNSSDKNKCSVRPTETEVMVAGAHKGLIMQRLQCCQLLWDANIKATMSHKNHPKLLDQLQ 480

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           Y +    PLA++ G  E +R  ++++D+   +E                    +  ++LV
Sbjct: 481 YCESTGIPLAVVLGESELARNTVKLRDIESREE------------------YEVLYTDLV 522

Query: 483 STVKKILQEN 492
           + +K++L   
Sbjct: 523 NKIKEVLSTK 532


>gi|300777749|ref|ZP_07087607.1| histidine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300503259|gb|EFK34399.1| histidine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 476

 Score =  237 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 133/490 (27%), Positives = 212/490 (43%), Gaps = 60/490 (12%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFL 60
               +++  L +G  D   +E+  R  I++ ++N +E +GF P+ETP  E   +L GK+ 
Sbjct: 16  NDIQEMKPSLAKGTRDFTAQEVSRRKYIINILQNNFELFGFQPLETPSFENLSTLTGKYG 75

Query: 61  PDEDRPNKGVFS-------------------------LQDDDGQWISLRYDLTAPLARYV 95
            + DR    + +                            +     +LRYDLT P AR+V
Sbjct: 76  EEGDRLIFKILNSSINEAKEEKKTQMLHDFQKALEKPFSAESLTDKALRYDLTVPFARFV 135

Query: 96  AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL 155
           A N   + FP +  +I PV+R ++   GRFR+F QCD D VGS +   + E+  +   + 
Sbjct: 136 AMNHGKLTFPFKRSQIQPVWRADRPQKGRFREFYQCDADVVGSESLLQEVELVQLYLKSF 195

Query: 156 EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
             + +      I +NNRKIL G+ E  G+         +    A+DKLDK G  GV   L
Sbjct: 196 ADLKVP---VTIHMNNRKILSGLAEYAGITDK-----LIDFTVALDKLDKIGKDGVVKEL 247

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLS--IDLEKSMHELYELVKGTIAGEKGFNELV 273
            E              ++ E ID +    S   D  +++ +L E   G   G KG  EL 
Sbjct: 248 LERE------------ISQESIDKLDFLFSQSDDALENLLQLKEKFAGNEIGLKGVEELE 295

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
            +       G +   +  + T+ RGL+YYTG ++E          K   V  GS+GGGGR
Sbjct: 296 FVLTQSLNLGVDIQNLVFNITLARGLDYYTGAIFEV---------KADEVAMGSIGGGGR 346

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           YD L   F  +N+P  G S G+ R+ + ++ L             L      D   +++ 
Sbjct: 347 YDNLTEVFGVKNIPGIGISFGLDRIYLVMEELNLFPEEASAKIEYLFANFGGDG--VTEA 404

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 LR  GI AE++  ++K    Q  YA+++     +  G  E     +  KDL  G
Sbjct: 405 LKLMMQLRAKGISAELYPENAK-INKQFTYAEKKGIKNLVFLGEEEIKNNTVTFKDLEAG 463

Query: 454 KELSREIKNN 463
            + +  ++  
Sbjct: 464 VQKTVSLEEF 473


>gi|169595260|ref|XP_001791054.1| hypothetical protein SNOG_00367 [Phaeosphaeria nodorum SN15]
 gi|160701055|gb|EAT91862.2| hypothetical protein SNOG_00367 [Phaeosphaeria nodorum SN15]
          Length = 453

 Score =  237 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 123/496 (24%), Positives = 211/496 (42%), Gaps = 50/496 (10%)

Query: 1   MGKKTK----LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           MGK+ K       ++P+G  D   ++  +R+R+ D++ ++++ +G   ++TP+ E  + L
Sbjct: 1   MGKEDKASKNFNLKVPKGTRDWTGEDAALRDRLFDTVTDVFKRHGATTLDTPVFELKEIL 60

Query: 57  GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
                ++   +K ++ LQD  G+  SLRYDLT    RY            + YR      
Sbjct: 61  SGKYGED---SKLIYDLQDQGGELCSLRYDLT-SFKRY---------QIAKVYRRDQPAM 107

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            +      ++              +    ++   + D+L     K   Y I IN+RK+LD
Sbjct: 108 TKGRLREFYQCDFDIAGSYDAMIPDAEVLKIATDVFDSL-----KWESYTIKINHRKVLD 162

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           GI +  G+      N    +  A+DKLDK     VK  +     D+      G  +  + 
Sbjct: 163 GIFKAAGVPE----NLIRPISSAVDKLDKLPWAEVKKEMETKGLDSEVADKVGHWVQRKG 218

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
            D ++ FL  D         E +       KG  ++  +   +   G    RI    ++ 
Sbjct: 219 GDDIIEFLKTD---------EALSKNEDVCKGVQDMEKLFAYLDAFGARK-RISFDLSLA 268

Query: 297 RGLEYYTGCVYEAIL--GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           RGL+YYTG +YE +     P +  +Q+ +  GSV  GGRYD LV  F G+ +P  G S G
Sbjct: 269 RGLDYYTGVIYEVVTEGSAPRVQGEQQEIGVGSVAAGGRYDELVGMFSGKPIPCVGISFG 328

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           I R++  +K+   ST   K++   ++       +  L++     Q L  AG++AE    +
Sbjct: 329 IDRIMSIMKAKGQSTQRAKDVDAFVMAFGGKGFTGMLTERMQVAQELWAAGLKAEFSYKA 388

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
                 Q K A+    PLA+I G  E   G ++IK L    E            +     
Sbjct: 389 KPKLPQQFKQAESAGVPLAVILGEDELKNGKVKIKVLGIKDE-----------NDPEKDG 437

Query: 474 ITIPISELVSTVKKIL 489
           + +  + +V  ++K L
Sbjct: 438 VLVDRANMVEEIRKRL 453


>gi|84999700|ref|XP_954571.1| histidyl-trna synthetase [Theileria annulata]
 gi|65305569|emb|CAI73894.1| histidyl-trna synthetase, putative [Theileria annulata]
          Length = 583

 Score =  237 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 132/494 (26%), Positives = 224/494 (45%), Gaps = 59/494 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +LP+G  D    E+  R  ++ SI++I+  +G   IETP+ E  ++L     ++    K
Sbjct: 125 PKLPKGTMDFCPNEVLTRRVVISSIKDIFRQHGAVEIETPVFELKETLLGKYGED---QK 181

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRFR 126
            +F L+D  G+ +SLRYDLT P AR+VA N    +        G V+R ++     GR+R
Sbjct: 182 LIFDLKDQGGEQLSLRYDLTVPFARFVAMNKMEKIKRFHI---GKVYRRDEPQLARGRYR 238

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD+D  G   +       + +   +  + + +  + + IN+R ILD +L   G+  
Sbjct: 239 EFYQCDLDCAGEYPKMVPDSEVIFI--LVRVLRLLKGSFAVRINHRAILDAVLFHCGV-- 294

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +++    +  +IDKLDK     VKL           + T    L     D +  F+ I
Sbjct: 295 --EVSMHRTICSSIDKLDKVPWDKVKL-----------EMTSEKGLPEYIADKIKEFIEI 341

Query: 247 DLE------KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +        K   +  + +    +     +++ ++   +   G   + +    ++ RGL+
Sbjct: 342 NGNFEEVLGKLRDKNIKTLTKDDSDSNVLDDMELLWSYLESFGVKESEVMFDMSLARGLD 401

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++EA L              GSVG GGRYDGL+  F G+NVP+ G S+GI RL  
Sbjct: 402 YYTGVIFEAFLKDE---------DIGSVGAGGRYDGLIGMFSGKNVPSVGMSVGIERLFR 452

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +    S      ++  V + ++        +      ML T GIRAE     + N   Q
Sbjct: 453 TMPKQNSG-----DLTDVFVCSVG-SPQMFFERMKLVGMLWTHGIRAEFLYNVNANLRKQ 506

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           L  A  +   L ++ G  E     ++IK L+  +E              R+  +T+  S+
Sbjct: 507 LDAATDKGVSLMVLVGDSELETDTVKIKRLSYNEE-------------ERLDDLTVKRSD 553

Query: 481 LVSTVKKILQENKE 494
           L+ST+K +L +N +
Sbjct: 554 LISTLKSLLSDNTK 567


>gi|88703671|ref|ZP_01101387.1| Histidyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88702385|gb|EAQ99488.1| Histidyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 426

 Score =  237 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 108/496 (21%), Positives = 184/496 (37%), Gaps = 87/496 (17%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
               RG  D    +      +   +  + E YG+  +  P++E S    + + +  D   
Sbjct: 4   LRSIRGMNDILPADTSHWQYLERQVAELLECYGYGELRLPIVESSALFSRSIGEVTDIVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++S +D +G  ISLR + TA   R   +N  T     R +  GP+FR E+   GR RQ
Sbjct: 64  KEMYSFEDRNGDSISLRPEGTAGCVRAAIQNNLTATPC-RLWYSGPMFRYERPQKGRQRQ 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGI 178
           F Q   +  G +   ADAE+ + +A     +G                   N R  L G 
Sbjct: 123 FHQIGAEIFGYATPDADAELIIFLARLWRILGIDDAVSLEINSIGSSEARANYRTALVGY 182

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           LE+     DD            D   +     +++L  +                  +  
Sbjct: 183 LEQRRESLDD------------DSQRRLETNPLRILDSKN---------PDTQALLNKAP 221

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +L  +       L   + G                             ++  +VRG
Sbjct: 222 ALADYLDEESRTHFAALKGFLDGAGVD-----------------------YTVNPRLVRG 258

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E +          K    G+V  GGRYDGLV +  G+  P  GF++G+ RL
Sbjct: 259 LDYYNKTVFEWV--------SDKLGAQGTVCAGGRYDGLVEQLGGKATPGVGFAMGMERL 310

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKN 416
           ++ L++               +  +    ++ +      + LR A   +R    LG   +
Sbjct: 311 LLMLEACGQLPEPRAP----DLFVVATGDEAQTAAMAAVEGLRDARPALRIVQQLGGG-S 365

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           F +Q+K ADR    LA++ G  E + G + +K L  G+E                 Q  +
Sbjct: 366 FRSQMKKADRSGAALALLWGEDEVAAGEVTVKPLRDGQE-----------------QTRV 408

Query: 477 PISELVSTVKKILQEN 492
           P++ L   +  +LQ++
Sbjct: 409 PVASLAGKIDTLLQQH 424


>gi|115389694|ref|XP_001212352.1| histidyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114194748|gb|EAU36448.1| histidyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 523

 Score =  237 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 117/531 (22%), Positives = 204/531 (38%), Gaps = 71/531 (13%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K      + P+G  D    +  +R+RI  +I ++++ +G   ++TP+ E  + L     +
Sbjct: 5   KAPSFNLKTPKGTKDWSGSDALLRDRIFTTIADVFKRHGGTALDTPVFELREILAGKYGE 64

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +   +K ++ LQD  G+  SLRYDLT P AR++A N D                      
Sbjct: 65  D---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPDVRSMKRYHIAKVYRRDQPAVSK 121

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F QCD D  GS          + +   +      +  Y I IN+RKILDGI E  
Sbjct: 122 GRMREFYQCDFDIAGSFDPMVPDAEVLKIVTEVFEELGWKGRYSIKINHRKILDGIFEVC 181

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+  +    +   +  A+DKLDK     V+  + +              L     D + +
Sbjct: 182 GVPTE----KIRPISSAVDKLDKMPWADVRKEMVDE-----------KGLDGAVADRIET 226

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++     + + +     E++    + + G +E+ ++ + +   G   +RI    ++ RGL
Sbjct: 227 YVMHKGSRELLDRLLTDEVLTANASAKAGLDEMTLLMDYLDAFGVL-DRISFDLSLARGL 285

Query: 300 EYYTGCVYEAILGFPVMNEK------------------------------QKPVVFGSVG 329
           +YYTG +YE +        +                                 +  GSV 
Sbjct: 286 DYYTGVIYEVVTEGSAPPAQTGAPEAQKVQKSGKKDKSKSGNLEDDDRSNDPTLGVGSVA 345

Query: 330 GGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALKSLESSTNNIK--EMGPVLITTMDHD 386
            GGRYD LV  F     +P  G S G+ R+    K+      + +      V +  M   
Sbjct: 346 AGGRYDNLVGMFLPKAQIPCVGVSFGVDRIFSITKARIEREKSAEALRSSEVDVFVMAFG 405

Query: 387 SD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                  L +     + L  AG++AE           Q K A++   P A I G  E + 
Sbjct: 406 GKGFNGMLKERMNVCKTLWEAGVKAEFSYKLKPKLPQQFKAAEQGGVPFAAILGEDELAA 465

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           G ++IK++                       + + ++ L   VK  + + +
Sbjct: 466 GKVRIKEM------------GLEEGHPEKEGVLVDLASLPEEVKTRVAKKR 504


>gi|329938954|ref|ZP_08288328.1| histidyl tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329301839|gb|EGG45732.1| histidyl tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 420

 Score =  237 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 94/474 (19%), Positives = 170/474 (35%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I     N G+  IETP  E  D   + + +  D  
Sbjct: 3   TFKAPKGTYDLLPPDSATFLAVREAIARPLRNSGYGYIETPGFESVDLFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++ +   G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYAFETKGGDRLALRPEGTASVLRAALEANLHKAGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G            D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLRGFRVLLNSLGDKECRPVYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  +      +  LR +D         V+  L +                   
Sbjct: 183 DFLRGLDLDEETLRRAEINPLRVLDDKRP----DVQKQLTD------------------- 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             I+  +L    +    E+ EL++      +    L                       V
Sbjct: 220 APILRDYLCDACKAYHEEVRELLRAAGVAFEDDPRL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++       +       +  +    ++          LR  GI  +   G  K 
Sbjct: 309 RTVLALEAEGI---ELPLPSVTSVYAVPLGEEARRVLFAKVTELRRLGIATDFAYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R     AI+ G  + + G++Q+KD+  G++    +    +  E R
Sbjct: 365 LKGAMKNANRSGARYAIVAGERDLAEGVVQLKDMESGEQAPVGLNEIVAELETR 418


>gi|300781071|ref|ZP_07090925.1| histidine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532778|gb|EFK53839.1| histidine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 441

 Score =  237 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 95/473 (20%), Positives = 174/473 (36%), Gaps = 68/473 (14%)

Query: 3   KKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
           K  K +    P+G  D         + +        +  G+  IE P+ E +    + + 
Sbjct: 9   KTEKFQPLSAPKGVPDYVPPTSATFHAVRSEFVRQAQLAGYQHIELPIFEDTTLFARGVG 68

Query: 62  D-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEK 119
           +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR E+
Sbjct: 69  ESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLNYYGPFFRYER 128

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINN 171
              GR+RQ  Q  V+ +G      D E+  +      AVG            D       
Sbjct: 129 PQAGRYRQLQQVGVEAIGVDDPLLDVEVIALADRCYRAVGLTGYRLELTSLGDSTCRPAY 188

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
           R+ L   L  + L  + +   ++  LR +D                       + T  A 
Sbjct: 189 RQKLQDFLLDLPLDEETRHRAQINPLRVLDDK----------------RPEVQEMTADAP 232

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           L  + +                            ++       ++  +   G       I
Sbjct: 233 LMLDHLS---------------------------DECRAHFETVTGSLDDLG---IAYTI 262

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   GF
Sbjct: 263 NPRMVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLMAQIGGQDLSGIGF 314

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            +G+ R ++AL++       + +   V+   +     +  +  +    LR  GI A+M  
Sbjct: 315 GLGVDRTVLALEAEGVQIEGVDQ--RVVAYGVGIGEQAQKRMALLIDELRANGISADMSY 372

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           G  +     +K ADR     A++ G  E   G + +K+L    + +  +  +E
Sbjct: 373 G-GRGLKGAMKGADRSGAGAALVLGERELEAGEITVKNLEDQTQKTVALDVHE 424


>gi|219871010|ref|YP_002475385.1| histidyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691214|gb|ACL32437.1| histidyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 419

 Score =  237 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 104/486 (21%), Positives = 189/486 (38%), Gaps = 77/486 (15%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    E  +   +  +IR+ + +YG+  + +P++E +D   + + +  D   K +F+ 
Sbjct: 1   MNDLSPTETPLWQWVESNIRDTFASYGYTEMRSPIMESTDLFKRGVGEATDIVEKEMFTF 60

Query: 74  Q--DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
              ++ G+  +LR + TA   R   E+        R + IGP+FR E+   GR+RQF Q 
Sbjct: 61  TRSEEAGESFTLRPEGTAGCVRAAIEHGWIYNQEQRLWYIGPMFRYERPQKGRYRQFHQA 120

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGLHG 186
            V+  G     ADAE+ ++ A   E +GI+ +     +   G+  R      L     + 
Sbjct: 121 GVEIFGIPNAEADAELIVLTARLWEKLGIREHVTLQLNSIGGLEVRTRYREALVAFLQNH 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            D L +        D   +     +++L  + +                    +  FL  
Sbjct: 181 LDVLKQD------PDSERRLTTNPLRILDTKNQA---------LQAVLNDAPKLHDFLDD 225

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + +     L  ++       +   +L                       VRGL+YY   V
Sbjct: 226 ESKAHFARLCAILDEMGIAYEVNQKL-----------------------VRGLDYYNKTV 262

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +               G+V GGGRYDGLV++  G      GF++G+ RL++ ++ + 
Sbjct: 263 FEWVTTA--------LGAQGTVCGGGRYDGLVAQLGGHATEGVGFAMGLERLVLLVQEVN 314

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYA 424
               N++    V I  +     + +     T+ LR A   +R  M   S  NF  Q K A
Sbjct: 315 ---PNVQLPRAVDIYVVHSGEGTTAVAFRLTETLRNAFPQLRT-MLHTSGGNFKKQFKRA 370

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           D+    +A++ G  E +   + +KDL                      Q+TI  ++L++ 
Sbjct: 371 DKSGAKIALVLGESEVAEQKVVVKDL-----------------FGEAEQMTIAQADLINE 413

Query: 485 VKKILQ 490
           +     
Sbjct: 414 LTTRFA 419


>gi|84623771|ref|YP_451143.1| histidyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|123725539|sp|Q2P3K8|SYH_XANOM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|84367711|dbj|BAE68869.1| histidyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 480

 Score =  237 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 149/513 (29%), Positives = 235/513 (45%), Gaps = 69/513 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF PIETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPIETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQD----------------DDG-QWISLRYDLTAPLARYVAENFDTIVFPCRT 108
               V+ +Q                 + G   ++LR+DLT PLARYVAE+   + FP R 
Sbjct: 62  ---QVYFVQSTGALANAAAAADEGAENGGLPELALRFDLTVPLARYVAEHEHDLSFPFRR 118

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ + 
Sbjct: 119 YQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQ 178

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           +NNRK+L G  E +G+   +    +L VLR +DK+DK G   V+  L            +
Sbjct: 179 LNNRKLLRGFFESLGVAEGE---LQLAVLREVDKIDKRGADYVRDTL----------VGE 225

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRKS 282
           G  + +EQ+  +++F+++  E     L +L      V  +    +G  EL  + ELV+  
Sbjct: 226 GFGIAAEQVARILAFVALRSEGHADALAQLQALEASVGASATLGEGIAELREVLELVKAL 285

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G       ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S + 
Sbjct: 286 GVPERAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYESLASHYT 337

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +P  G SIG++RL   L+         +     ++  M  D   L       + LR 
Sbjct: 338 KSRLPGVGISIGLTRLFWQLREAGLIQGIAESSVQAMVALM--DETRLDDVLDIARRLRI 395

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGI  E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL   ++       
Sbjct: 396 AGINTEVQM-EPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ------- 446

Query: 463 NESWREARVAQITIPISELVSTVKKILQENKEE 495
                     Q  +   EL ST+   L++ K +
Sbjct: 447 ----------QFDVARDELASTLLVELEQAKGD 469


>gi|254412359|ref|ZP_05026133.1| histidyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196180669|gb|EDX75659.1| histidyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 462

 Score =  237 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 142/492 (28%), Positives = 225/492 (45%), Gaps = 50/492 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+    P GF +    E R+   ++D+IR ++E YGF PIETP +E  + L    
Sbjct: 1   MAKADKINFSCPSGFPEFLPGEKRLEMYLIDTIRQVFERYGFTPIETPAVERLEVLQAKG 60

Query: 61  PDEDRPNKGVFSLQ---------------DDDGQWISLRYDLTAPLARYVAENFDTIVFP 105
              D     ++ LQ               +   +  +L++D T PLA Y+A + + + FP
Sbjct: 61  NQGDNI---IYGLQPILPPNRQAEKEQAGESGSEERALKFDQTVPLAAYIARHLNELQFP 117

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
              Y+I  VFR E+   GR+RQF QCD+D VG +  +   +  +          I   D+
Sbjct: 118 FARYQIDVVFRGERAKAGRYRQFRQCDIDVVGRNKLSLLYDAQIPAIIAEIFTAINIGDF 177

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I INNRK+L G  E IGL       + +  +R +D  +K G   VK  L          
Sbjct: 178 LIRINNRKVLSGFFESIGLDES----KIMPSIRIVDAAEKIGETKVKKALLAE------- 226

Query: 226 FTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAG---EKGFNELVVISELVR 280
                 L+ EQ++ +++F  I    ++ + +L  +++        + G  EL  +   VR
Sbjct: 227 -----GLSDEQVEQILTFTKIQGSVDEVLAQLNAMLEDKPDAQVLKTGIAELETVITGVR 281

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
             G +     I  +I RGL+YYTG VYE  L              GS+  GGRY+ LV  
Sbjct: 282 NLGVSDRVFCIDLSIARGLDYYTGTVYETTLVG--------HEALGSICSGGRYEELVGM 333

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           F G  +P  G SIG++RL+  L       +       V++  M   SD +  Y   +Q L
Sbjct: 334 FVGDKMPGVGISIGLTRLMSRLIQAGILESFSSTPAQVMVVNM--QSDLMPLYLEVSQKL 391

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R AGI         ++ G QL+ AD+R  PL +I G+ E +     +K++  G++++  I
Sbjct: 392 RQAGISTITSFDE-RSVGKQLQQADKRGIPLCVIIGSEEAAAQKCGLKNMRTGEQIAVNI 450

Query: 461 KNNESWREARVA 472
           +   +    ++A
Sbjct: 451 EQLANEVSKQLA 462


>gi|119944924|ref|YP_942604.1| histidyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|119863528|gb|ABM03005.1| histidyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 448

 Score =  237 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 99/469 (21%), Positives = 185/469 (39%), Gaps = 69/469 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   ++  +  ++    R +  +YG+  I  P++E +    + + +  D  
Sbjct: 28  KIQAIRGMNDTLPEQTPVWQKLESLFRQVVSSYGYSEIRMPIVENTTLFKRSIGEVTDIV 87

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  ++LR + TA   R   E+        R +  GP+FR+E+   GR+R
Sbjct: 88  EKEMYTFADRNGDSLTLRPEGTASCVRAGNEHGLLYNQERRLWYTGPMFRHERPQKGRYR 147

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q  V+  G  +   DAE+ ++ A    A+GI +      +       R +    L  
Sbjct: 148 QFHQFGVETFGIGSADIDAEVILLSARLWRALGIDKQVELQLNSLGSNEARALYKEALVV 207

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 ++L+E        D   +     +++L  +    +       A         + 
Sbjct: 208 YLSTHVEQLDE--------DSKRRMVSNPLRVLDSK--NPDIQALLVDA-------PKLS 250

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           ++L  +  +   +L + +                            +  I+  +VRGL+Y
Sbjct: 251 AYLDDESAEHFAQLQKYLDAA-----------------------GIKYVINERLVRGLDY 287

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +               G++  GGRYDGLV +  G+  PA GF++G+ R+I+ 
Sbjct: 288 YNRTVFEWVTTS--------LGSQGTICAGGRYDGLVEQLGGKATPAVGFAMGLERIILM 339

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE------MFLGSSK 415
           L++L  + +  K++    I   D             ++     IR E      M    + 
Sbjct: 340 LETLALNDDVKKDVDIYSIVVGDGAD---IAGFKVAEL-----IRTELPMLKMMHHCGAG 391

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNN 463
           NF  Q+K AD+    LA+I    E     + IKDL    ++ S  +   
Sbjct: 392 NFKKQMKRADKSGARLALIIAENELESDCVTIKDLQGKYEQQSVAMNEL 440


>gi|313125233|ref|YP_004035497.1| histidyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312291598|gb|ADQ66058.1| histidyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 431

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 114/456 (25%), Positives = 195/456 (42%), Gaps = 38/456 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF D    E+  R ++ D++ +    YGF  I TP LE +        +E    + +++
Sbjct: 6   KGFRDFYPDEMSARRQVFDAVEDAAARYGFREIATPRLERTQMYVDKSGEEIV--EELYA 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +D  G+ +SL  +LT  +AR V      +  P +     P +R E+   GRFR+F Q +
Sbjct: 64  FEDKGGREVSLTPELTPTVARMVVAKQQALSKPIKWVSSRPFWRFEQVQQGRFREFYQTN 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD  GSS   ADAE+    AD L ++G+  +D+   +++R IL G+L+      D +   
Sbjct: 124 VDIFGSSEPEADAEILAFAADALTSLGLTADDFEFRVSHRDILGGLLDSFDADVDTR--- 180

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               +RA+DK  K   +    LL +              + +  +D +  F   D++ ++
Sbjct: 181 --NAIRAVDKRAKVEDEEYLGLLSDAGLSYDQAREFDNLIVAGDLDAIAEFGGDDVKDAV 238

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             L  ++  T                            IS T  RGL+YYTG V+E    
Sbjct: 239 ENLRAVLAATED------------------FGVRQYCDISLTTARGLDYYTGVVFECF-- 278

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                      V  +  GGGRYD L+  F GQ  PA G ++G + L +  +  +      
Sbjct: 279 ------DSTGDVSRAAFGGGRYDNLIEDFGGQPTPAVGVALGDATLQLLCERADVWPEEE 332

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
            +    ++T      D+ +      + LR  G   EM + + ++FG Q+ YAD  N    
Sbjct: 333 LQTDYYVLTV----GDTRAVASRVARDLRDRGNVVEMDV-ADRSFGAQMGYADSINAETV 387

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +I G  +     + +KD+  G + +  + +    R+
Sbjct: 388 VIVGEQDLENDEVTVKDMDTGDQTTAPVSDFPGDRD 423


>gi|227549168|ref|ZP_03979217.1| histidyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078728|gb|EEI16691.1| histidyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 427

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 98/472 (20%), Positives = 179/472 (37%), Gaps = 68/472 (14%)

Query: 1   MGKKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M + +  +A   P+G  D           + D         G+  IE P+ E +    + 
Sbjct: 1   MSENSTFKALSAPKGVPDYVPPASATFIAVRDEFARQARLAGYQHIELPVFEDTTLFARG 60

Query: 60  LPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRN 117
           + +  D  +K +++  D   + ++LR + TA + R V E+     + P +    GP FR 
Sbjct: 61  VGESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHNLDRGYLPVKLNYYGPFFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGI 169
           E+   GR+RQ  Q  V+ +G      DAE+  +      AVG            D     
Sbjct: 121 ERPQAGRYRQLQQVGVEAIGVDDPLLDAEIIALADRCYRAVGLTGFRLELTSLGDNTCRP 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L  + L  + +    +  LR +D                         T  
Sbjct: 181 AYREKLQKFLFSLDLDEETRRRAEINPLRVLDDK----------------RPEVKAMTAD 224

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L  + +                            ++       ++  +   G +    
Sbjct: 225 APLMIDHLS---------------------------DEARAHFDTVTATLDAMGVD---Y 254

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   
Sbjct: 255 VINPRMVRGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQIGGQDLSGI 306

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF +G+ R ++AL++   + + ++    V +  +    ++  +  +    LR AGI A+M
Sbjct: 307 GFGLGVDRTVLALEAEGVTLDGVER--RVDVFGVAMGEEASKRMSLLIDDLRAAGISADM 364

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             G  +     +K ADR     A++ G  E     + +K+LA+  + S  + 
Sbjct: 365 SYG-GRGLKGAMKGADRAGAKFALVLGDNELEASEVAVKNLAEHSQTSVALD 415


>gi|87123086|ref|ZP_01078937.1| histidyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86168806|gb|EAQ70062.1| histidyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 432

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 101/480 (21%), Positives = 184/480 (38%), Gaps = 65/480 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   ++ R    +   +R   + +  + I TPLLE ++   + + +  D  
Sbjct: 3   QLQSLRGMVDLLPEQTRRWQAVEAVVRAQMQRWCCEEIRTPLLEVTELFARGIGEGTDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S  D   +  +LR + TA + R   +N        R +  GP+FR E+   GR R
Sbjct: 63  GKEMYSFIDRGDRSCTLRPEGTASVVRAALQNGLLAQGVQRLWYGGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+ +G S   +DAE+  +  D L  +G+              L   +  +G   
Sbjct: 123 QFHQIGVEWLGVSTAASDAEVIALAWDLLAELGVTG------------LALEVNSLGTPE 170

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D KL                     +  L       S      A    +   + +     
Sbjct: 171 DRKLY--------------------RSTLVAWLEKRSDALDPDAQQRLQTNPLRILDSKH 210

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              K++ +    ++ ++A          + E ++        ++ +  +VRGL+YY    
Sbjct: 211 PQTKAVLQDAPTLEQSLAP-SSRARFEAVLEALQDLAIP---VQRNPHLVRGLDYYGHTA 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E            +     +V GGGRYDGLV +  G   PA G+++G+ RL++ L++  
Sbjct: 267 FEIT--------SNQLGAQATVCGGGRYDGLVQQLGGPPTPAIGWALGMERLLLVLEAAA 318

Query: 367 SSTNNIKEMGPVL-----ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                 +    V         +     +  +  +  + LR  G+  E+    S  F  Q 
Sbjct: 319 QVDPAGRAAQLVRAQGPVAYVVHRGEAAARQALVLCRGLRQRGVAVELDATGSA-FAKQF 377

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K ADR     A++ G  E  RG++++K L    +                AQ  +P+++L
Sbjct: 378 KRADRSGADWALVLGDAEVERGVVKLKPL----QAEV----------GETAQEELPVADL 423


>gi|237844313|ref|XP_002371454.1| histidyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211969118|gb|EEB04314.1| histidyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221481270|gb|EEE19667.1| histidyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 1116

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 118/519 (22%), Positives = 203/519 (39%), Gaps = 63/519 (12%)

Query: 9    AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             +  +G  D    ++ +R  +L S+R ++  +G   I+TP+ E  ++L     +     K
Sbjct: 605  PKAAKGTQDFGPAQMAVRELVLGSVREVFRRHGGVEIDTPVFELRETLLGKYGEN---QK 661

Query: 69   GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR-- 126
             V+ L+D  G+ +SLRYDLT P ARYVA +    +   R + IG V+R ++    R R  
Sbjct: 662  LVYDLKDQGGEQLSLRYDLTVPFARYVASH---DIEKIRRFHIGKVYRRDEPQMNRGRFR 718

Query: 127  --QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
                   D+  V       DAE   +M + L  +      +H+  N+R +LDG++E  GL
Sbjct: 719  EFYQCDFDIAGVSPVKMVPDAEAVCIMVEALRTLQGMVGKFHVKTNHRVLLDGMMEVCGL 778

Query: 185  HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D    +      +IDKLDK     V+  L +              + ++  D +   +
Sbjct: 779  PAD----KFTTACSSIDKLDKEPWAAVRRELVD-----------TKGVAADVADRLGELV 823

Query: 245  SIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             +        +                   E+ + S+ +   G  ++      ++ RGL+
Sbjct: 824  QMRGTFSQIIADLSKKPDFASNEKVALALQEMEIFSQYIEAMGVQTDEAIFDLSLARGLD 883

Query: 301  YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
            YY+G ++EA+L              GSVGGGGRYD LV  F G++VPA G S+G+ RL  
Sbjct: 884  YYSGVIFEAVLV------GTDGAAVGSVGGGGRYDKLVGMFSGRDVPAVGMSVGVERLFR 937

Query: 361  ALKSLESST--------------------------NNIKEMGPVLITTMDHDSDSLSKYQ 394
             ++                                 ++       +       + L    
Sbjct: 938  MVEKSLGMAAAPTAEEDEHAGDKKKKKKEKATQEVPSLVRESFTDVLVCSVGDNMLKACM 997

Query: 395  MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                 L   GI AE F G+      Q+  A +R  PL +I G  E  R   +++ L    
Sbjct: 998  SVAGSLWRNGIAAEFFYGAGAKLKKQMDMACQRRIPLLVILGEEELKRNTAKVRQLWYDD 1057

Query: 455  ELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                +  +      A   +  + + +L   +K    ++ 
Sbjct: 1058 --DVKRPDTNGEGSAGEKEEEVSLDQLPQVIKAYFCQHG 1094


>gi|34541645|ref|NP_906124.1| histidyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|39932025|sp|Q7MTB3|SYH_PORGI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|34397963|gb|AAQ67023.1| histidyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 454

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 134/473 (28%), Positives = 218/473 (46%), Gaps = 61/473 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I D+IR +YE +GF+ IETP +E   +L GK+  + DR 
Sbjct: 3   KPSIPKGMRDFSPVEMSRRNYIFDTIREVYELFGFNQIETPTMEMLSTLMGKYGEEGDRL 62

Query: 67  NKGVFSLQDDDG-------QWIS---------------LRYDLTAPLARYVAENFDTIVF 104
              +F + +          + ++               LRYDLT P ARYV  + + I F
Sbjct: 63  ---LFKVLNSGDVLADFCAEELAEKNSLRFAAKACEKGLRYDLTVPFARYVVMHRNEINF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D +GS +   + E+  ++++    +GI    
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDGDVIGSDSLMNEVELIQIISEVFRRLGI---R 176

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E +     D+ +    +  AIDKLDK GL  V   L         
Sbjct: 177 TRILLNNRKILSGIAEVV-----DEADRLTDITVAIDKLDKIGLDKVNDEL--------- 222

Query: 225 DFTKGANLTSEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
              +      E I+ +  F+ +  D  + +  L   +  +  G KG  EL  I + V + 
Sbjct: 223 ---RTKGFGEEAIERLRPFIEMKGDNREKLDRLKSALASSETGLKGIEELTYILDKVERV 279

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
             +S  + +  ++ RGL YYTG + E          K      GS+ GGGRYD L   F 
Sbjct: 280 QLHS-ELMVDISLARGLSYYTGAILEV---------KALDAEMGSITGGGRYDNLTGIFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            + +   G S G  R+   +  L+       ++    +  ++   +         Q LR 
Sbjct: 330 LEGMSGVGISFGADRIYDVMMQLDLFPAE--KLTGTQLLFVNFSEEDADSLLPLIQKLRE 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
            G+R E++   +K    Q+ YA+  N P   + G  ER+ G + +K++  G++
Sbjct: 388 QGLRTELYPEPAK-IKKQMSYANAANIPYVALVGENERAAGQVNLKNMLTGEQ 439


>gi|237734561|ref|ZP_04565042.1| histidyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382381|gb|EEO32472.1| histidyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 425

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 110/470 (23%), Positives = 191/470 (40%), Gaps = 60/470 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   ++      +   IR I  NY    + TP+ E+++   + + D  D 
Sbjct: 1   MMYKAPRGTVDILPEKSAKWQTLEQLIRTICANYNVKEVRTPIFEHTELFTRAVGDTTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++  D  G+ I+LR + TA +AR   EN          + Y IGP+FR E+   G
Sbjct: 61  VSKEMYTFADKKGRSITLRPEGTAGVARAYVENKMFSNPDKISKLYYIGPMFRYERPQNG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGIL 179
           R RQF Q  V+ +G  +   D E   M    +EA+G++    HI      ++R      L
Sbjct: 121 RQRQFHQFGVEMIGYESPYLDVECMTMAVTLVEALGLQGVKLHINTLGDGDSRDAYREAL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +       D L          D  +++    +++L  + + D++             +  
Sbjct: 181 KAHFAPYLDDL--------CQDCKNRYEANPLRIL--DCKVDHNHPAMAN-------VPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            V +LS   +    ++ EL+                               + + +VRGL
Sbjct: 224 TVDYLSEAAKAHFTKVCELLDDLE-----------------------IEYVVDTNLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E I      ++  +     +VGGGGRY+GLV    G   P  GF+ G+ RL+
Sbjct: 261 DYYCHTVFEVI------SDDPRLGAGATVGGGGRYNGLVQELGGPEAPGVGFAFGMERLL 314

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +A+         ++E   + +  M    ++       T MLR  G   +M     ++   
Sbjct: 315 IAMDE------ELEEPEGLDVYVMPMGDEARDLAVQITAMLRANGFSVDMDY-QGRSLKA 367

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           Q K  DR N   A+I G  E +  ++ IK      +    I+N  ++ E 
Sbjct: 368 QFKTVDRLNSHFAMIIGDQEIADEVVNIKCTHSKTQDIVPIENIVAYIEN 417


>gi|77918646|ref|YP_356461.1| histidyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|123743059|sp|Q3A5R6|SYH_PELCD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|77544729|gb|ABA88291.1| histidyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 419

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 86/467 (18%), Positives = 181/467 (38%), Gaps = 55/467 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +     +G  D    ++     +      I++ YGF  I  P++E ++   + + +  D 
Sbjct: 1   MSISGIKGMNDILPSDVETWQFLEREAHRIFKLYGFAEIRVPVVEKTELFCRSIGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K +++  D     ++LR + TAP+ R   E+    + P  + Y +GP+FR E+   GR
Sbjct: 61  VEKEMYTFDDRSSNSLTLRPEGTAPVMRSFIEHKLHALDPVSKLYYMGPMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIG 183
           +RQF Q   + +G      DA++  M+    +AVGI   + H+     ++      + + 
Sbjct: 121 YRQFHQIGAEAIGVDDPMMDAQVLAMLCHYFDAVGIDNVELHVNSLGCQECRPQYRQALT 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            + + +L++        D   ++    +++L  +                ++    ++  
Sbjct: 181 GYLESRLDKL-----CADCQRRYQTNPLRVLDCK---------VPACQEATKDAPSVLDL 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L         ++ + ++                              I++ +VRGL+YYT
Sbjct: 227 LCSGCNDHFAQVRQHLQEL-----------------------QIDYTINARMVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +          +     +V  GGRYDGL+    G  +P  GF++G+ RL++   
Sbjct: 264 KTTFEMVTN--------QLGSQNAVAAGGRYDGLIKELGGPALPGIGFAMGVERLVLMKG 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             +             +        +  K       L+   +RAEM   + K+   Q++ 
Sbjct: 316 EQQVQPPRPD------VFLAALGEAAGQKAFALMYRLQRLDLRAEMAF-TGKSLKAQMRR 368

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           A + N    ++ G  E + G  Q++D+  G +    ++  E     +
Sbjct: 369 AGKLNARYVLMLGEEELASGQAQLRDMDNGSQEPIALEGIEQALLEK 415


>gi|256074929|ref|XP_002573774.1| histidyl-tRNA synthetase [Schistosoma mansoni]
 gi|238658962|emb|CAZ30006.1| histidyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 536

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 135/550 (24%), Positives = 232/550 (42%), Gaps = 100/550 (18%)

Query: 1   MGKKT------KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD 54
           M K +      K   + P+G  D    ++ I   +  +I   ++ +    I+TP+ E  +
Sbjct: 26  MAKSSIKQCEVKYNVKTPKGTRDRDPIQMTILEDVFSTIIRCFKRHDAVTIDTPVFELKE 85

Query: 55  SLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            L     +E   +K ++ LQD  G+ ++LRYDLT P ARYVA +    +   + Y+IG V
Sbjct: 86  VLAGKYGEE---SKLIYDLQDQGGEALALRYDLTVPFARYVAMHK---IKSIKRYQIGKV 139

Query: 115 FRNEKH--GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
           +R ++     GR+R+F QCD D         ADAE   +M + L  + +   D+ I IN+
Sbjct: 140 YRRDQPAMTRGRYREFYQCDFDIAGDHGLMLADAECLRIMYEVLSELNL--GDFVIKINH 197

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
           R++LDG+     +      N+ +    +IDKLDK   + V+  L E              
Sbjct: 198 RRLLDGLFSACDVP----SNKFVPACSSIDKLDKIPWEDVRRELCE-----------DKG 242

Query: 232 LTSEQIDIMVSFLSIDLEKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           L+ E  D + S++ +     +    E  E +    + +    E+ ++ +  +  G    R
Sbjct: 243 LSPEAADKIGSYVQLTGCLDLVERLESDEHLNNQPSAKVALQEMRLLLDYCKALGI-QER 301

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMN------------------------------- 317
           I    ++ RGL+YYTG +YEA+L     N                               
Sbjct: 302 ISFDLSLARGLDYYTGVIYEAVLKGFTYNPNSPSAELTGSNETDLNSSVKNKKSSKKDKK 361

Query: 318 ----------EKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVALKSL 365
                        + +  GSV GGGRYDGLV  F      VP  GFS G+ RL+   ++L
Sbjct: 362 AKEQLEEESVTSGESMAVGSVAGGGRYDGLVGMFSSSGTRVPCVGFSFGVERLLAIKEAL 421

Query: 366 ESSTNNIK---EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +S++  K         +         + +     Q+L  A I+A M   +     +QL+
Sbjct: 422 SNSSDKNKCSVRPTETEVMVAGAHKGLIMQRLQCCQLLWDANIKATMSHKNHPKLLDQLQ 481

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           Y +    PLA++ G  E +R  ++++D+   +E                    +  ++LV
Sbjct: 482 YCESTGIPLAVVLGESELARNTVKLRDIESREE------------------YEVLYTDLV 523

Query: 483 STVKKILQEN 492
           + +K++L   
Sbjct: 524 NKIKEVLSTK 533


>gi|114777430|ref|ZP_01452427.1| histidyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114552212|gb|EAU54714.1| histidyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 412

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 95/456 (20%), Positives = 164/456 (35%), Gaps = 57/456 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    E+    R+  + R ++ +Y F  +  P+LE  +   + + +  D  
Sbjct: 5   KLQSIRGIHDGLPGEVARWQRVEQAARKVFGSYAFSEVRMPVLEPVELFVRSVGEDTDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K +++  D  G  I LR + TA   R   +   T     R Y IGP+FR E+   GR R
Sbjct: 65  SKEMYAFTDQGGDHICLRPEGTAGAVRAWLQGGLTRAGAQRWYYIGPMFRRERPQKGRLR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLH 185
           QF Q  V+   +     DAE+  M    L  +G+      I          G  +K+  +
Sbjct: 125 QFQQIGVEMFSAPGPIEDAEILAMAHAFLSELGVPELKMEINSLGCNSCRPGYRDKLVTY 184

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              + +           +++     +++L  +                      MV+ L 
Sbjct: 185 LQARADRLCETC-----VERITRNPMRVLDCK---------VASCQAELGDAPEMVANLC 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              ++   ++ + +                          +    ++  IVRGL+YY   
Sbjct: 231 DACDRHFTDVQKGLDAL-----------------------AIPYSVNPRIVRGLDYYNRT 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +          K    G+V  GGRYDGLV    G   PA GF+ G+ RL + L   
Sbjct: 268 AFEIVT--------DKLGAQGTVLAGGRYDGLVEELGGPATPAIGFAAGLERLAMLLDDD 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           E+            +  +               +LR AG+          +   Q K AD
Sbjct: 320 EA--------TGPDMAVVALGEAVQGYALAQADLLRKAGLSV--VHCGGGSAKRQFKMAD 369

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           R       + G  E   G + +K++A G++ S    
Sbjct: 370 REGVRFVAVIGDDEMQAGTVMLKNMATGEQQSVATA 405


>gi|242089547|ref|XP_002440606.1| hypothetical protein SORBIDRAFT_09g003930 [Sorghum bicolor]
 gi|241945891|gb|EES19036.1| hypothetical protein SORBIDRAFT_09g003930 [Sorghum bicolor]
          Length = 823

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 126/470 (26%), Positives = 212/470 (45%), Gaps = 41/470 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            ++P+G  D   +++ IR R    I ++++ +G   ++TP+ E  ++L GK+  D    +
Sbjct: 387 PKIPKGTRDFGKEQMAIRERAFSIITSVFKMHGATALDTPVFELRETLMGKYGED----S 442

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+
Sbjct: 443 KLIYDLADQGGELCSLRYDLTVPFARYVAMNS---ISALKRYQIAKVYRRDNPSKGRYRE 499

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G           + +   L    +    Y I +N+RK+LDG+LE  G+   
Sbjct: 500 FYQCDFDIAGVYEPMEPDFEVIKVLTELLN-QLDIGTYEIKLNHRKLLDGMLEICGVPP- 557

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +   V  +IDKLDK   + VK  L +              +++E  D + + +   
Sbjct: 558 ---QKFRTVCSSIDKLDKQTFEQVKKELVDE-----------KGISNETADEIGNLVKTR 603

Query: 248 LEKS-----MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                    + +               NEL ++ + + K     ++I    ++ RGL+YY
Sbjct: 604 GPPLEVLMGLRKEGSKFMNNEGSVAALNELEILFKALDK-ANAIDKIVFDLSLARGLDYY 662

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YEA+               GS+  GGRYD LV  F G+ +PA G S+GI R+   +
Sbjct: 663 TGVIYEAVFKGAA--------QVGSIAAGGRYDNLVGMFSGKQIPAVGVSLGIERVFAIM 714

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E   N         +       D           L +AGI+AE  L +     N +K
Sbjct: 715 EQQEKEKNEKIRPTETEVLVSILGKDLTLAA-ELVSELWSAGIKAEFKLTTR--VANHIK 771

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           YA + + P  ++ G  E  +G +++KD+   +E   + K+     + R++
Sbjct: 772 YALQSSIPWMVLVGESELQKGTVKLKDVEANQEYEVDRKDFVQELKNRLS 821


>gi|288932487|ref|YP_003436547.1| histidyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894735|gb|ADC66272.1| histidyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 409

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 105/464 (22%), Positives = 194/464 (41%), Gaps = 61/464 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E PRG  D   +E+  R  +    R + E +G+  ++TP  E+ +       +E   
Sbjct: 1   MKIERPRGTRDFLPEEMEKRRELEKIFREVVELFGYREVQTPTFEHLELFTIKSGEEII- 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ +D  G+ ++LR +LTAP+ R        +  P R Y     FR E+   GR+R
Sbjct: 60  -KEIYAFKDKGGRDLALRPELTAPVMRMFVNECSHLPKPLRFYYFSNCFRYERPQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q   + +GS++  A+AE+ ++    LE  G+    + + I +  +L  +L  I    
Sbjct: 119 EFWQFGAELIGSNSPEAEAEVILLSYRMLEKAGVS---FELSIGDVNLLRYVLRDIPEKE 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                       A+  +DK   + ++ LL +   +   +                     
Sbjct: 176 -----------AAMRLIDKEEFETLRNLLAKYDREEIYETILQLG--------------- 209

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                  E+  + +     +  F+ L  + E++        +  +  T+ RGL+YYTG V
Sbjct: 210 -------EIESVEEAEEVVDYDFSHLKKLCEILDA---LELKYFVDFTVARGLDYYTGTV 259

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E           +       + GGG Y  L   F G++VP TGF+IG  R++      E
Sbjct: 260 FEYY--------AEGLGAQKQICGGGSY-RLAKLFGGEDVPGTGFAIGFDRVM------E 304

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             T + K   PV++ ++    D         + LR  G++  + +   +N   Q+ +A+ 
Sbjct: 305 LFTKSPKYEPPVVVVSLVESKD----AFKIAERLRENGVKVVVDV-MGRNLKKQMSFAND 359

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +   A+I G  E   G   IKDL  GK+ S   +      +++
Sbjct: 360 ISAEYAVIIGKKELESGTFSIKDLVTGKQKSLSFEEAVELIKSK 403


>gi|285018036|ref|YP_003375747.1| histidyl-tRNA synthetase (histidine--tRNA ligase)(hisrs) protein
           [Xanthomonas albilineans GPE PC73]
 gi|283473254|emb|CBA15759.1| probable histidyl-trna synthetase (histidine--trna ligase)(hisrs)
           protein [Xanthomonas albilineans]
          Length = 466

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 135/490 (27%), Positives = 223/490 (45%), Gaps = 47/490 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
               V+ +Q                   ++LR+DLT PLARYVAE+   + FP R Y++ 
Sbjct: 62  ---QVYFVQSTGALANAAAEGAEGAMPELALRFDLTVPLARYVAEHEHELSFPFRRYQMQ 118

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GRFR+F QCD+D +G  A +   +  ++         +    + + +NNR
Sbjct: 119 RVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGAFAVQLNNR 178

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K++ G  E +G+   ++   +L VLR +DKLDK G   V+  L            +G  +
Sbjct: 179 KLMRGFFESLGVAEGER---QLAVLREVDKLDKRGADYVRETL----------AGEGFGI 225

Query: 233 TSEQIDIMVSFLSIDLEKS------MHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
            + Q++ ++ F+++           +  L      +    +G  EL  +  LV+  G   
Sbjct: 226 PAAQVEQILQFVAVRSSGHEDALARLDALEAATGASATLREGVAELREVLALVKALGVPE 285

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
               ++ +I RGL+YYTG VYE +L              GS+  GGRY+ L S +    +
Sbjct: 286 RAYCLNFSIARGLDYYTGTVYETLLSDY--------PQIGSICSGGRYEDLASHYSKSRL 337

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG++RL   L+               ++  M  D   L+      + LR  GI 
Sbjct: 338 PGVGISIGLTRLFWQLREAGLIDGIASSSVQAMVALM--DEARLADALDIARRLRAGGIN 395

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL + ++     ++  S 
Sbjct: 396 TEVQM-EPKKVGKQFQYAARAGIRFVVLAGEDELARGVVAVKDLVREQQFEIAREDLAST 454

Query: 467 REARVAQITI 476
               + Q  +
Sbjct: 455 LLVELEQAKV 464


>gi|261879482|ref|ZP_06005909.1| histidine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333907|gb|EFA44693.1| histidine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 455

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 133/487 (27%), Positives = 214/487 (43%), Gaps = 64/487 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKF 59
           MGK    +  +P+G  D   +E+  RN I D+I+ +Y  YGF  IETP +E   +L GK+
Sbjct: 1   MGKN---KPSIPKGTRDFGPEEMSKRNYIFDTIKEVYALYGFQQIETPAMEKLQTLMGKY 57

Query: 60  LPDEDRPNKGVFSLQDDDG-------------------QWIS---LRYDLTAPLARYVAE 97
             + D   K +F + +                        +    LRYDLT P ARYV  
Sbjct: 58  GDEGD---KLLFKILNSGDYLKGINDSELQERNPLRLQTKLCEKGLRYDLTVPFARYVVM 114

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           + + +  P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++    + 
Sbjct: 115 HREELQLPFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFQR 174

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
           +GI+     I INNRKIL GI E IG     + ++ + +  A+DKLDK G+  V   L  
Sbjct: 175 LGIRVL---IKINNRKILTGIAEVIG-----EADKIVDITVAMDKLDKIGIDLVNEELRS 226

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVI 275
                         +  E I+ +   + +    ++ +  +  ++K +  G KG  E+  I
Sbjct: 227 N------------GIAEEAIEKLQPIIKMQGSNDEKLEVISNVLKTSETGMKGVEEMRFI 274

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
            + ++  G NS  + +  T+ RGL YYTG ++E          K      GS+ GGGRYD
Sbjct: 275 LDTLKNIGLNS-EMDLDLTLARGLNYYTGAIFEV---------KALDTEIGSITGGGRYD 324

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            L   F    +   G S G  R+   L +L+           +L                
Sbjct: 325 NLTGIFGMPGLSGVGISFGADRIYDVLNTLDLYPKEAISATQLLFINFGEKET--DYCLP 382

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
                R A IR E++    K    Q+ YAD +      + G  E ++G + +K++  G++
Sbjct: 383 IVAKSRAANIRTEVYPDKVK-MKKQMSYADAKKIAYVALAGDNEIAQGKITLKNMVTGEQ 441

Query: 456 LSREIKN 462
                  
Sbjct: 442 KLVTADE 448


>gi|120610112|ref|YP_969790.1| histidyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120588576|gb|ABM32016.1| histidyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 461

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 94/471 (19%), Positives = 182/471 (38%), Gaps = 61/471 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    E      +   +R +   + +  + TP+LE++    + + +  D  
Sbjct: 32  KLAAVKGMNDILPPESSRWEWLEGKVRGLMGQFAYRNVRTPILEHTALFVRGIGEVTDIV 91

Query: 67  NKGVFSLQDDDGQ-----WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            K ++S  D   +      +SLR + TA + R   E+      P R +  GP+FR EK  
Sbjct: 92  EKEMYSFHDRSDKYGDNDHLSLRPENTAGVVRAAIEHNMLYDGPKRLWYTGPMFRREKPQ 151

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-E 180
            GRFRQF Q   + +G +    DAE+ ++     +++G+      +    +        E
Sbjct: 152 RGRFRQFHQIGAEALGFAGPDVDAELILLADALWKSIGLTDVRLELNSLGQPAERARHRE 211

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++  H +         L   D   +     +++L  +                 +    +
Sbjct: 212 QLIAHFERHA-----DLLDEDGKRRLHTNPLRILDTKNPAMKP---------VVDSAPRL 257

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +       L  ++                               I+  +VRGL+
Sbjct: 258 MDFLGEESLAHFDGLRAILDANGIA-----------------------YTINPRLVRGLD 294

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E I          +    G+V  GGRYD L+ +  G+  PA G++IG+ R++ 
Sbjct: 295 YYNLTVFEFIT--------DRLGSQGTVCAGGRYDDLIVQVGGKPAPAVGWAIGVERVLE 346

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS---KNF 417
            L+   ++    +      +  +  D+ +        + LR AG+  +M   S+    +F
Sbjct: 347 LLREQGAAIPEPRP----DVYAVVPDASAAPVVLRTLRQLREAGLSVQMHAASAEGQGSF 402

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG--KELSREIKNNESW 466
            +Q K AD      A++ G  E +RG + +K L +   +++ R +    +W
Sbjct: 403 KSQFKRADASGAAFALVFGADELARGAVTVKPLREQGAEQVERRLDEIPAW 453


>gi|167767122|ref|ZP_02439175.1| hypothetical protein CLOSS21_01640 [Clostridium sp. SS2/1]
 gi|167711097|gb|EDS21676.1| hypothetical protein CLOSS21_01640 [Clostridium sp. SS2/1]
 gi|291559549|emb|CBL38349.1| histidyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 414

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 90/463 (19%), Positives = 179/463 (38%), Gaps = 56/463 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   K++  R  + +  +++  +Y    I TP+ E+++   + + +  D 
Sbjct: 1   MITQAPRGTKDWFGKDMDQRTYLENIFKDLCASYNIHEIITPVFEHTELFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + ISL+ + TA   R   +N       P + + I P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGHRSISLKPEGTAGAIRAYLQNGLANEPQPIKMFYITPAFRYEKPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKIG 183
            RQ  Q  V+ VG+ +  A+ E+  +++  ++ +G+K    HI     +       + + 
Sbjct: 121 LRQHHQFGVEFVGAESPLAEVELITLVSTFIKKIGLKDAKLHINSIGCENCRKEYNKALL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  +         R          +   L + + +     +  K A  T       + +
Sbjct: 181 AYLKEHEEHLCPTCRERM-------EKNPLRVIDCKVPECKEIVKDAPRT-------IDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  + +    EL  L+       +   E+                       VRGL+YYT
Sbjct: 227 LDDECKAHFEELKSLLDALNIPYEVDTEI-----------------------VRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK-GQNVPATGFSIGISRLIVAL 362
             V+E +                 + GGGRYD LV       ++P+ GF +G+ R++  L
Sbjct: 264 KTVFEFVNEDGFT-----------LCGGGRYDNLVHEIDGKVSMPSVGFGMGVERILYFL 312

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +      ++   + +       ++ +K       LR  G   E      ++   Q+K
Sbjct: 313 EEEKVDLPCTRD---IDLYVGILGQEAKAKAYQIVVDLRHQGFVVETDY-LGRSVKAQMK 368

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           YA++ N    II G  E ++    +K++   +  +  +     
Sbjct: 369 YANKLNAKNTIIIGDDELAKNEGNVKNMETREVTTISLDKIAD 411


>gi|6728986|gb|AAF26984.1|AC018363_29 putative histidyl tRNA synthetase [Arabidopsis thaliana]
          Length = 479

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 127/493 (25%), Positives = 216/493 (43%), Gaps = 53/493 (10%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
             + +   +LP+G  D   +++ +R +    I+N+++ +G   ++TP+ E  ++L     
Sbjct: 35  SNENRRLPKLPKGTRDFAKEQMAVREKAFSIIQNVFKRHGATALDTPVFELRETLMGKYG 94

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           ++   +K V+ + D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +   
Sbjct: 95  ED---SKLVYDIADQGGELCSLRYDLTVPFARYVAMNG---ITSFKRYQIAKVYRRDNPS 148

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G           + +   L    ++  DY + +N+RK+LDG+LE 
Sbjct: 149 KGRYREFYQCDFDIAGLFEPMGPDFEIVKILTELLD-ELEIGDYEVKLNHRKLLDGMLEI 207

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  +    +   +  +IDKLDK   + VK  + E              L+SE  D + 
Sbjct: 208 CGVPPE----KFRTICSSIDKLDKQSFEQVKKEMVEE-----------KGLSSEIADRIG 252

Query: 242 SFLSIDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +F+            + +         +  +  +EL ++ E +++S   S RI    ++ 
Sbjct: 253 NFVKEKGAPLELLSKLRQEGSEFLDNQSSREALDELSIMFEALKRSKC-SERIVFDLSLA 311

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYTG ++EA+               GS+G GGRYD L+  F  + VPA G S+GI 
Sbjct: 312 RGLDYYTGVIFEAVC---------IGAEVGSIGAGGRYDNLIGMFGTKQVPAVGMSLGIE 362

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++ L      +       +       + L++       L  A I AE +L S + 
Sbjct: 363 RVFNIMEELNEKQKQVIRPTETQVLVSIMVDNKLAEAAELVSQLWGAKINAE-YLVSKRK 421

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                  A     P  ++ G  E S   + +K L KG E   +               T 
Sbjct: 422 -EKHFNRAKESGIPWMVMVGEKELSGSFVTLKKLEKGSEEKED--------------QTC 466

Query: 477 PISELVSTVKKIL 489
                V  +KK+L
Sbjct: 467 TRDRFVEELKKLL 479


>gi|289581194|ref|YP_003479660.1| histidyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530747|gb|ADD05098.1| histidyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 432

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 120/457 (26%), Positives = 196/457 (42%), Gaps = 37/457 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF D    E+  R   +D++ +    YGF  I TP LE ++       D D  +  +++
Sbjct: 6   KGFRDFYPGEMAARRATIDTLEDTARGYGFREIGTPALERAEMWTDKSGD-DIVD-ELYA 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +D  G+ ++L  +LT  +AR V      +  P + +   P +R E+   GR R+F Q +
Sbjct: 64  FEDQGGRHVTLTPELTPTVARMVVAKQQELSKPIKWFSTRPFWRYEQVQQGRQREFYQTN 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD  GSS   ADAE+    AD +  +G+    +   I++R IL G+LE      D +   
Sbjct: 124 VDIFGSSEPEADAEILAWAADAMTNLGLTGEHFEFRISHRDILGGVLESYDADVDTE--- 180

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               +RA+DK              +  T    D   GA LT++Q    V F  +     +
Sbjct: 181 --DAIRAVDK------------SDKLSTVEYHDLLIGAGLTADQA---VEFDDLIAGGDL 223

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            ++ E    T   +   + L  +       G       IS    RGL+YYTG V+E    
Sbjct: 224 EDVRE-FANTERVDAAVDNLQNVLAAADDFGARE-FCTISLETARGLDYYTGVVFECFDS 281

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              ++         S+ GGGRYD L+  F GQ  PA G + G + L +  +         
Sbjct: 282 AGEVS--------RSIFGGGRYDTLIESFGGQPTPAVGVAPGHATLSLLCQRAGVWPAEE 333

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 ++       D+ ++    T+ LR  G   E  + + ++FG+QL YAD  N    
Sbjct: 334 VTTDYYVLQI----GDTRTEAAQITRELRERGHVVETDV-AGRSFGSQLNYADSINAETV 388

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +I G  + +   + IKD+A G +L   +++     E 
Sbjct: 389 VIAGEQDLANDEVTIKDMASGDQLQVPVESFPGEHEQ 425


>gi|302541112|ref|ZP_07293454.1| histidine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302458730|gb|EFL21823.1| histidine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 420

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 95/474 (20%), Positives = 173/474 (36%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D           + D+I       G+  IETP  E  +   + + +  D  
Sbjct: 3   TFKAPKGTYDLIPPASATYLAVRDAIATPLRRSGYGYIETPGFENVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++L    G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYTLTTKGGDELALRPEGTASVLRAALEANLHKAGSLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++  D   ++G++          D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILAHDAYRSLGLRNFRILLNSLGDAECRPVYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  D +    +  LR +D                   D       GA L    
Sbjct: 183 DFLRGLDLDEDTRRRIDINPLRVLDDK----------------RDAVQKQLAGAPL---- 222

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +  +L     +    + EL+       +   +L                       V
Sbjct: 223 ---LRDYLCDGCREYHARVRELITAQGVVFEDDVKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     +         +  +    ++          LR  G+ A+   G  K 
Sbjct: 309 RTVLALEAEGVRLDLP---DATSVFAVPLGEEARKVLFGLVGELRKEGVAADFAYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R     AI+ G  + + G++Q+KD+  G++ S  +    +  +++
Sbjct: 365 LKAAMKAANRSGARYAIVAGERDLAEGVVQLKDMESGEQESVPLTKIVTTIQSK 418


>gi|255569072|ref|XP_002525505.1| histidyl-tRNA synthetase, putative [Ricinus communis]
 gi|223535184|gb|EEF36863.1| histidyl-tRNA synthetase, putative [Ricinus communis]
          Length = 886

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 124/484 (25%), Positives = 214/484 (44%), Gaps = 60/484 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            +LP+G  D   +++ IR R    I  +++ +G   ++TP  E  ++L GK+  D    +
Sbjct: 448 PKLPKGTRDFAKEQMAIRERAFSIITEVFKRHGATALDTPAFELRETLMGKYGED----S 503

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+
Sbjct: 504 KLIYDLADQGGELCSLRYDLTVPFARYVAMNG---ITSFKRYQIAKVYRRDNPSKGRYRE 560

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G   E       + +   L    +   +Y + +N+RK+LDG+LE  G+  +
Sbjct: 561 FYQCDFDIAGQYEEMGPDFEIVKILTELLD-ELNIGEYKVKLNHRKLLDGMLEICGVPPE 619

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +   +  ++DKLDK     VK  + E              L+ E  D + +F+   
Sbjct: 620 ----KFRTICSSVDKLDKQSFSQVKKEMVEE-----------KGLSVETADKIGTFVKES 664

Query: 248 LE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                    + +      G  +  +  +EL ++ + + KS    +++    ++ RGL+YY
Sbjct: 665 GHPKELLSKLKQEGSEFLGNASSRRALDELEILFDALEKSKC-IDKVAFDLSLARGLDYY 723

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG ++EA+               GS+  GGRYD L+  F  + VPA G S+GI R+   +
Sbjct: 724 TGVIFEAVFKGKT--------QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIM 775

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +  +      VL++ +  D   L         L  A ++AE     S  F   + 
Sbjct: 776 EE-DQNQTSRPTETQVLLSILG-DKSKLPLAAELAGELWNAKLKAE--YTVSTRFSKHID 831

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A     P+ ++ G  E  +G+++IK+L                      +  +P S  V
Sbjct: 832 RAKESKIPIMVLVGDKELEKGIVKIKNLET------------------TVEKEVPRSNFV 873

Query: 483 STVK 486
             +K
Sbjct: 874 EELK 877


>gi|294670885|ref|ZP_06735741.1| hypothetical protein NEIELOOT_02589 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307372|gb|EFE48615.1| hypothetical protein NEIELOOT_02589 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 430

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 107/505 (21%), Positives = 179/505 (35%), Gaps = 97/505 (19%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D +R     +G+  I TP+LE +    + +
Sbjct: 4   KIQAVKGMNDLLPLEQKDFKLTSAFWQAFEDVVRKWTRRFGYSQIRTPILEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +    +SLR + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDTLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+ +G      DAEM  M AD    +GI            +     
Sbjct: 124 RPQKGRYRQFHQVGVEALGFDGPDVDAEMIAMCADLWRELGISDFLTLEINNLGNKEERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L++     D+            D   +     +++L  +            
Sbjct: 184 AHRSALVAYLQQHEAILDE------------DSKRRLKTNPLRVLDSKN---------PD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                 Q   ++ +L  +     +    L+                              
Sbjct: 223 LQAVCNQAPRLLDYLGEESLAHYNGFKRLLD-----------------------VLGIAY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +  +VRGL+YY   V+E            K     +V GGGRY+GL+    G++ PA 
Sbjct: 260 VENPRLVRGLDYYNLTVFEWTT--------DKLGAQATVCGGGRYNGLIGELGGKDAPAI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +        +      V+        + L     Y   LR AG    +
Sbjct: 312 GFAMGIERLLLLVHEYGRLKTDAAPDIYVM-----QQEEGLEAAINYASRLRAAGFNV-L 365

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               +++  NQ+K AD      A+I G  E   G   +KDL                 + 
Sbjct: 366 QHCGNQSLKNQMKKADASGARFALIVGEDEAENGTATVKDL-----------------QG 408

Query: 470 RVAQITIPISELVSTVKKILQENKE 494
           +  Q TI  +EL      +L + K 
Sbjct: 409 QFGQQTIASAELT----TLLTQWKN 429


>gi|294506836|ref|YP_003570894.1| Histidyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343164|emb|CBH23942.1| Histidyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 437

 Score =  236 bits (601), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 91/476 (19%), Positives = 177/476 (37%), Gaps = 65/476 (13%)

Query: 9   AELPRGFADCPTKE-----------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
            +  +G  D                      +  ++R++   + F+ I TP+LE ++ + 
Sbjct: 7   FQNIKGTFDILPDAYTDDGGTRVAASAEWRHVEATVRDVMRRHNFEEIRTPVLEPTELVA 66

Query: 58  KFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVF 115
           + + +  D   K +F+ +        LR ++TAP+ R   ++         + + IGP F
Sbjct: 67  RGVGESTDIVQKEMFAFE-RSDTQYVLRPEITAPVVRSFLQHHLDQRGGVQKLFYIGPCF 125

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKI 174
           R E+   GR+RQF Q  ++ +G+    ADAE   ++    EA+G+      +      + 
Sbjct: 126 RAEQPQKGRYRQFHQFGIEVLGADQPRADAETIAVLMAVCEALGLSDLRLRLNTLGTPER 185

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
            +  +  +  +     +E     R         L+   L + + + ++     + A    
Sbjct: 186 REEYVAALQDYLAPHADELSETSR-------RRLEQNPLRILDTKVEHEQALLRDA---- 234

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ F+S +      E+  L+                                   
Sbjct: 235 ---PTLIDFVSDESLAHYDEVKGLLGDL-----------------------GVEYDEDPH 268

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSI 353
           +VRGL+YYT   +E         E        ++ GGGRYD L       +  PA GF+ 
Sbjct: 269 LVRGLDYYTETTFEL--------EHPGLGAQSALAGGGRYDRLAEVLGSDDPVPAVGFAA 320

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+ RL +AL + E+            +       ++ +      Q LR  G+     L  
Sbjct: 321 GMERLFLALDAAEADRPGAATPD---VFIAALGDEAEAWCFRTAQELRAGGLHVAHDL-M 376

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            ++   Q+K A+R+N P A+I G  E   G   +K++  G++      +   +  +
Sbjct: 377 GRSLKAQMKEANRQNAPYAMIIGGNELEAGAATVKEMESGEQEDVPFDDLVEYLTS 432


>gi|254449209|ref|ZP_05062658.1| histidyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261186|gb|EDY85482.1| histidyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 413

 Score =  236 bits (601), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 91/462 (19%), Positives = 184/462 (39%), Gaps = 52/462 (11%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D    +     ++  +++++ + YG+  I  P+LE ++   + + D  D   K +++ 
Sbjct: 1   MHDILPDQTPAWQQLESTLQHLMQQYGYREIRMPVLEQTELFSRSIGDVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  ++LR + TA   R   ++        R + +G ++R+E+   GR+R+F Q  V
Sbjct: 61  EDRNGDSLTLRPEGTASCVRAGIQHGLLFNQTQRLWYMGTMYRHERPQKGRYREFRQIGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           +  G      +AE+ +M A   + +G+K+                L  +G   + +    
Sbjct: 121 ETYGMPGPDVEAELILMSARLWKRLGLKQVRLE------------LNTLGTAEERQQY-- 166

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                             +  L E    +     + A        + +         +++
Sbjct: 167 ------------------RQQLIEFYQAHEEQLDEEAKSRLHSNPLRILDSKNPQVAALN 208

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                +   + GE+       + EL+R +G +     I+  +VRGL+YY   V+E I   
Sbjct: 209 TSAPSLMDAL-GEESRAHFDTLCELLRAAGVD---YCINPKLVRGLDYYCHTVFEWIT-- 262

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                  +    G++  GGRYDGLV +  G+  PA G ++G+ RL+  L+ L   T    
Sbjct: 263 ------DELGAQGTICAGGRYDGLVEQLGGRATPAVGMAMGMDRLLALLEELGELTMPSA 316

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 I  +   +D  +      + LR      + +   G   +  ++ K AD+     
Sbjct: 317 A----DIYVLALGADDEAAAMQCAEQLRDQMVDYKVQWHCGGG-SLKSRFKKADKSGARY 371

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           A++ G  E  RG + IK L  G++++           + + +
Sbjct: 372 AVLIGGDEGQRGEVVIKPLRGGEQITVASDELAQRLTSYIQE 413


>gi|83815951|ref|YP_444974.1| histidyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83757345|gb|ABC45458.1| histidyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 435

 Score =  236 bits (601), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 91/476 (19%), Positives = 178/476 (37%), Gaps = 65/476 (13%)

Query: 9   AELPRGFADCPTKE-----------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
            +  +G  D                      +  ++R++   + F+ I TP+LE ++ + 
Sbjct: 5   FQNIKGTFDILPDAYTDDGGTRVAASAEWRHVEATVRDVMRRHNFEEIRTPVLEPTELVA 64

Query: 58  KFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVF 115
           + + +  D   K +F+ +        LR ++TAP+ R   ++         + + IGP F
Sbjct: 65  RGVGESTDIVQKEMFAFE-RSDTQYVLRPEITAPVVRSFLQHHLDQRGGVQKLFYIGPCF 123

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKI 174
           R E+   GR+RQF Q  ++ +G+    ADAE   ++    EA+G+      +      + 
Sbjct: 124 RAEQPQKGRYRQFHQFGIEVLGADQPRADAETIAVLMAVCEALGLSDLRLRLNTLGTPER 183

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
            +  +  +  +     +E     R         L+   L + + + ++     + A    
Sbjct: 184 REEYVAALQDYLAPHADELSETSR-------RRLEQNPLRILDTKVEHEQALLRDA---- 232

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++ F+S +      E+  L+                                   
Sbjct: 233 ---PTLIDFVSDESLAHYDEVKRLLGDL-----------------------GVEYDEDPH 266

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSI 353
           +VRGL+YYT   +E         E        ++ GGGRYD L       +  PA GF+ 
Sbjct: 267 LVRGLDYYTETTFEL--------EHPGLGAQSALAGGGRYDRLAEVLGSDDPVPAVGFAA 318

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+ RL +AL + E+   +        +       ++ +      Q LR  G+     L  
Sbjct: 319 GMERLFLALDAAEA---DRPGADTPDVFIAALGDEAEAWCFRTAQELRAGGLHVAHDL-M 374

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            ++   Q+K A+R+N P A+I G  E   G   +K++  G++      +   +  +
Sbjct: 375 GRSLKAQMKEANRQNAPYAMIIGGNELEAGAATVKEMESGEQEDVPFDDLVEYLTS 430


>gi|325981898|ref|YP_004294300.1| histidyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325531417|gb|ADZ26138.1| histidyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 424

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 99/459 (21%), Positives = 172/459 (37%), Gaps = 51/459 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +  RG  D   +E  +       +R     YG+  I TP++E +D   + + +  D   K
Sbjct: 6   KAIRGMNDILPEESYLWEYFEQMVRLWLTAYGYRNIRTPIVEQTDLFIRSIGEVTDIVEK 65

Query: 69  GVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            +++  D  +   ++LR + TA   R   E+      P R Y  GP+FR+E+   GR+RQ
Sbjct: 66  EMYTFIDHLNNDSLTLRPEGTASCVRAAIEHNLLYAGPQRLYYAGPMFRHERPQRGRYRQ 125

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+ +G +    DAE+ +M     E +GI      I          +     L   
Sbjct: 126 FHQVGVEALGYAGPDIDAELIVMCVRLWELLGISDLRLEISTLGNTESRALHRSRLLKYF 185

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           ++  + L      D L +  +  +++L  +                 E    ++  L  +
Sbjct: 186 ERHRDNLD----EDSLRRLYVNPLRILDSKNPEMQQ---------IIENAPKLIDDLDPE 232

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                  L  +++                              I+  +VRGL+YY   V+
Sbjct: 233 SCGHFESLQRILRE-----------------------RGINYNINLRLVRGLDYYNRTVF 269

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +          K    G+V  GGRYDGLV +  G+  PA GF++G+ RL+  ++    
Sbjct: 270 EWVT--------DKLGAQGTVCAGGRYDGLVEQVGGKPTPACGFAMGVERLLSLMQEYGK 321

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                     +       D   +       + LR  G    +  G   +F +Q+K AD  
Sbjct: 322 KIQQPVPDVYIAYQ---GDEQVMDYAWKCAEFLRDEGFDVILHCGGG-SFKSQMKKADSS 377

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNES 465
               A+I G  E     + IK L    +++S ++     
Sbjct: 378 GAVYALIIGNDEFRAQQVTIKPLRDLIEQVSLKLSEVAE 416


>gi|159898767|ref|YP_001545014.1| histidyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159891806|gb|ABX04886.1| histidyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 434

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 134/465 (28%), Positives = 223/465 (47%), Gaps = 37/465 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   + +R+R  I D++  I E YGF+P+ TP++EYS++L   + DE   
Sbjct: 3   ITPRAYKGMRDHLPEAMRLRRFITDTLIGILERYGFEPLSTPIVEYSETLEGKIGDE--- 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++ L+      ++LRYD T PLAR VA+N   +  P + Y +G  +R E+   GR+R
Sbjct: 60  EKLLYRLK-YGDDALTLRYDQTVPLARVVAQNEGKLTMPFKRYALGQSYRGERQARGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q D D VG  +  ADAE+  ++ + L A+G       + +N+R+IL G+    G+  
Sbjct: 119 EFWQLDADIVGVDSPIADAEIVAVVVEGLRALGFTGAK--VLLNHREILSGLARVAGVPE 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++         RAIDKLDK G  GV+  L +              +++E  + ++ F+ I
Sbjct: 177 NEAGGVY----RAIDKLDKIGNDGVRNELLKS------------GVSAEAAERVLHFVGI 220

Query: 247 DL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
               E  + E+  ++            L  I E++   G  ++   I+ ++ RGL YYTG
Sbjct: 221 SGSIEAVLAEMESVLANDPPALAAVAALRTICEVLTSFGVPADSFTIAPSLARGLSYYTG 280

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
           CV+EA+L  P           GS+ GGGRYD LV  F  +++P  G + G+ RL   +  
Sbjct: 281 CVFEAVLDSPP---------MGSLLGGGRYDNLVGMFSKRSLPTVGCAFGLERLFDLMLE 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L       + +   +        D  ++       LR AG+       S     NQ K A
Sbjct: 332 LNMGPRPERTIDAYVTLFAG---DFQNESLRLAGELRVAGLSVLTAY-SPVKIANQFKEA 387

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           DR+    A++ G  + + G++Q+KDL  G++ +       +  +A
Sbjct: 388 DRKGANFALVLGPDDLAAGVVQLKDLRSGQQQAVARDAIVAAIKA 432


>gi|189499373|ref|YP_001958843.1| histidyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|229558645|sp|B3ELN3|SYH_CHLPB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189494814|gb|ACE03362.1| histidyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 434

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 101/473 (21%), Positives = 182/473 (38%), Gaps = 51/473 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
               +G  D    EI     I   I  +   YGF  I TP+ EY+D   + +    D   
Sbjct: 4   YRAVKGTKDIFPDEITSWKYIEGVIHRVVGLYGFQEIRTPVFEYTDLFQRSIGSTTDIVG 63

Query: 68  KGVFSLQ-DDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +FS + + DG+ ++LR ++TA + R   + N  +     + Y I  +FR E+   GR 
Sbjct: 64  KEMFSFRPEPDGRSVTLRPEMTAGVMRAFLQANLSSASPVHKLYYIAELFRKERPQAGRQ 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +G+S+  A AE+  MM     ++G+      I         G L+    +
Sbjct: 124 RQFSQFGAEMLGASSPEAVAEVIDMMMQVFTSLGVSGLRLRINTL------GDLDDRVRY 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D            +D   +  L+   L + + +  +       A         +  FL+
Sbjct: 178 RDALRAYLEPHSGLLDAPSRERLEKNPLRILDSKNPDIQSVIADA-------PKLHDFLN 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                   ++   +                          S    I   +VRGL+YY   
Sbjct: 231 PSARAEFDQVLLYLD-----------------------QKSIEYVIDPLLVRGLDYYCHT 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVALKS 364
            +E +                ++GGGGRYDGL        ++PA GF++G+ RL++ ++ 
Sbjct: 268 AFEVVSPE--------LGAQDAIGGGGRYDGLARELGSKSDIPAVGFAVGMERLLITMEK 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                + +     V I     + +  +       +LR +GIR EM L   ++   Q++ A
Sbjct: 320 QGLLRHIVPSGPRVYIVL--QNEELKTHALSACDLLRRSGIRTEMDLC-GRSMKAQMREA 376

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           +R++   A+  G  E       +K+L   ++    I+   +   +    + +P
Sbjct: 377 NRQHADYALFVGKSEVESQAYGLKNLRTSEQDFLSIREMIARLASSTKHVEVP 429


>gi|313884096|ref|ZP_07817862.1| histidine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620543|gb|EFR31966.1| histidine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 439

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 108/485 (22%), Positives = 193/485 (39%), Gaps = 58/485 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +  +G  D    ++   + + D+ R I+E Y F  + TP++E  +   + + +  D  +K
Sbjct: 3   QKIKGTEDLLADKMPTWHYVEDTARTIFEAYNFKEMRTPMIENFELFSRSVGESTDIVSK 62

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGRF 125
            ++  +D  G+ I+LR + TAP+ R   E+         P + Y IGP+FR E+   GR 
Sbjct: 63  EMYDFEDKGGRRIALRPEGTAPVVRAFVEHKLFGPEYPQPYKAYYIGPMFRYERPQAGRQ 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGILEK 181
           RQF Q  ++  GSS    DAE   M  D L  +G++    H+        R      L  
Sbjct: 123 RQFHQIGMEVFGSSNPATDAEGIAMAWDLLSELGLENLTIHLNSLGKTPERMAYRQALID 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                  +L+E        D   +     +++L  +   D             +    ++
Sbjct: 183 YFTPHLAELSE--------DSQRRLHDNPLRVLDSKDPKDKVF---------VKDAPTIL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +LS + +     +   +                              +I+  +VRGL+Y
Sbjct: 226 DYLSEESKAHFQAVQNYLTDLE-----------------------IPFQINPYVVRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   ++E ++      E +      +V GGGRYDGLV    G  VP  GF++G+ RLI+ 
Sbjct: 263 YQDTIFEIMV------EDESIGAQSTVAGGGRYDGLVQELGGPEVPGFGFALGVERLILV 316

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++        I     + +  +  D ++ S      Q  R  G+ A+     +++  +Q 
Sbjct: 317 MEHQ---AVEIPAEDGLDLFVLLADPEANSLALQVLQAARQDGLIADRDF-MNRSLKSQF 372

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K A + N  L    G  E +  M+++K+   GKE    +            Q+T+  S +
Sbjct: 373 KTAAKNNASLVTTLGGDEVASKMIRLKNQETGKEAEFSLDELIEDFAGIYRQMTMDTSAI 432

Query: 482 VSTVK 486
               K
Sbjct: 433 DDFFK 437


>gi|282855650|ref|ZP_06264961.1| histidine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282586498|gb|EFB91755.1| histidine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 423

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 91/459 (19%), Positives = 170/459 (37%), Gaps = 55/459 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D    E      +L         + +  +  P+ E+++   + + D  D   
Sbjct: 5   IKGPRGVRDILPDESWKWAYVLGRAAETAGRFNYSEVRLPIFEHTELFSRGVGDTTDIVE 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF--PCRTYRIGPVFRNEKHGPGRF 125
           K +++  D   + I+LR ++TA + R   E+   +    P + +  GP+FR E+   GR+
Sbjct: 65  KEMYTFTDKGDRSITLRPEMTAGMMRSYVEHSLGVPGGNPAKLWGAGPMFRYERPQKGRY 124

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGL 184
           RQF Q D + +GS +   DAE+ M   +    +G++  +  I      +      EK+  
Sbjct: 125 RQFWQLDYEEIGSESPLVDAEVIMTAIELFRTLGMRNLEVVINSVGCPRCRPVYREKLIG 184

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           +   +  E            +     +++L      D   D    A         +   L
Sbjct: 185 YLQGRCGELCDTC-----KSRLERNPLRVL------DCKEDREIVAG-----APDIFDSL 228

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +  +    +   +                            +  +  T+VRGL+YYT 
Sbjct: 229 CDECAEHFKTVTAALT-----------------------RLGVKYTLDKTLVRGLDYYTK 265

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E         +        +V GGGRYD L     G +VP  GF+ G+ R+I+ +  
Sbjct: 266 TAFEV--------KSGDLGAQSAVCGGGRYDNLAEAIGGPHVPGVGFAAGLDRVILVMGE 317

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                 +      +    +  D  +          LR AG++A+M   + +    Q+K A
Sbjct: 318 QG---CSFGAEPALDAYVVCPDETARLDAVELLYALRRAGLKADMDY-AGRGMKGQMKTA 373

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
                  A I G  E +RG+  ++DL+   +    + + 
Sbjct: 374 VASGAKAACILGGDELARGVAAVRDLSAAAQEEVPLADV 412


>gi|330830067|ref|YP_004393019.1| histidyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328805203|gb|AEB50402.1| Histidyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 415

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 104/492 (21%), Positives = 180/492 (36%), Gaps = 89/492 (18%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             DC  ++  +  ++   +R +  +YG+  +  P++E +    + + +  D   K +++ 
Sbjct: 1   MNDCLPEQSPVWQKVEQILRQVVASYGYSEVRMPIVEQTHLFKRAIGEVTDVVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G  +SLR + TA   R   E+        R + +GP+FR+E+   GR+RQF Q  V
Sbjct: 61  EDRNGDSLSLRPEGTASCVRAGIEHGLLYNQERRMWYMGPMFRHERPQKGRYRQFHQFGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDGILEKIGL 184
           +  G +    DAE+ M+        GI                    R  L   LE+   
Sbjct: 121 ELFGINGPDIDAELIMLTHRLWRLFGISEHVTLQLNTLGQSAERAAYRDALVAYLEQYKE 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D++   R+                +++L  +     +                +   L
Sbjct: 181 QLDEESQRRMYS------------NPLRVLDSKDEKVQA---------ILAGAPRLFDHL 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +       L  L++      +    L                       VRGL+YY  
Sbjct: 220 GEESLAHFEGLKRLLESAGIKYEVNERL-----------------------VRGLDYYNL 256

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +               G+V  GGRYDGLV +  GQ  PA GF++G+ RL++ L++
Sbjct: 257 TVFEWVTSS--------LGAQGTVCAGGRYDGLVEQLGGQPTPAVGFAMGMERLVLMLET 308

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLK 422
           LE + +       V +        +        + LR A   +R  M      NF  QLK
Sbjct: 309 LELNADIRPA---VDVYLAMVGEGTEQAGFQLAERLRDALPDLR-LMSHCGGGNFKKQLK 364

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            AD+    +A+I G  E   G + IK L                   +  Q T+ +   +
Sbjct: 365 RADKSGAAIALILGETEVQNGEITIKYLR-----------------GQAEQQTVKVDAAI 407

Query: 483 STVKKILQENKE 494
           +    +L    E
Sbjct: 408 A----LLAAKGE 415


>gi|289548264|ref|YP_003473252.1| histidyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181881|gb|ADC89125.1| histidyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 408

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 97/462 (20%), Positives = 184/462 (39%), Gaps = 59/462 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
               RGF D   +++R   R+  ++R +   + F+ +  P++EY++   + + D  D   
Sbjct: 4   FRTVRGFHDILGEDLRKFRRVTQTVREVLRRFNFEEVILPVVEYAELFQRSIGDFTDIVQ 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +F   D  G+ ++LR + TA   R   +N   T+    + +  GP+FR E+   GR+R
Sbjct: 64  KEMFVFPDRKGRLLALRPEGTASAVRAYLQNRLYTLRPYVKLFYEGPMFRYERPQAGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   +  GS     DAE+  ++   L+ +GI        +  +       E +    
Sbjct: 124 QFHQIGAEVFGSEDPLVDAEVIKIVHLILKELGIPAVVEINSLGCKVCRPVYREALSKFL 183

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V      +++     +++L  +                 ++   M+ +L  
Sbjct: 184 ESVAGHLCDVC-----MERKDKNPLRVLDCK---------VTTCQEAVKEAPRMLDYLCE 229

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D +K  H +   ++                             + +  +VRGL+YYT  V
Sbjct: 230 DCKKHHHSVKRYLE-----------------------VMEVPYRENPHLVRGLDYYTRTV 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EA+     +          ++  GGRYD LV    G   PA GF++G+ RL + +   E
Sbjct: 267 FEAVSETLNI----------TIIAGGRYDYLVEELGGPPTPAVGFAVGVERLSMLVSVQE 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                 +E     +       +      M    LR+ G R E+      +   QL+ A++
Sbjct: 317 ------EEEPLYFVIPFGQVEE---YALMVADFLRSQGKRVEISYKKG-SLKKQLELANK 366

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                A+I G  E++   + IKDLA G++   +++  + +  
Sbjct: 367 FKARYAVIVGEDEKNSSEVSIKDLATGEQRRVKLEALKDYHR 408


>gi|268609347|ref|ZP_06143074.1| histidyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 446

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 109/462 (23%), Positives = 186/462 (40%), Gaps = 59/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           L  + P G  D   K++   + I    R   E++GF  +  P  E +D   + + +  D 
Sbjct: 3   LNIKRPNGTEDVLPKDVYKWHTIEKIARETAESFGFGELRFPTFENTDLFLRSVGETTDV 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++++       +LR + TA   R + +N       P R Y I   FR+E+   GR
Sbjct: 63  VQKEMYTVKAK-ETEFTLRPEGTACAIRAMLQNGLLNEALPQRIYYIISCFRHERPQAGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILE 180
            R+F Q  ++  GS+A TADAE+ ++    LE +G+K      +     N R      L+
Sbjct: 122 LREFHQFGIEMAGSAAPTADAEVILLAKTLLERLGLKNIELLINSIGCPNCRAKYHEALK 181

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  D+L +           ++     ++LL  +                 +   ++
Sbjct: 182 AYFEPHIDELCDTC--------KERLVKNPMRLLDCKSPICKE---------IGKDAPVI 224

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             +L  D      +L + + G                            K+   IVRGL+
Sbjct: 225 TDYLCEDCSDHFTKLQKYLTGF-----------------------GIEYKVDPRIVRGLD 261

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E +               G+V GGGRYDGL+ +  GQ+ PA GF +GI RL++
Sbjct: 262 YYTKTVFEFVTTE--------IGAQGTVCGGGRYDGLIEQLSGQSTPALGFGMGIERLLL 313

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +        +        I        +L K    T+ LR  G  AE  L   +    Q
Sbjct: 314 VMDKQG---CDYLTPKKCDIYFATMGEAALEKAMQLTKDLRELGYCAEYDL-MGRGIKPQ 369

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           +KYA++ N    ++ G  E   G +++K+++KG+E    + +
Sbjct: 370 MKYANKINAAFTVVIGDNELESGKVKLKEMSKGEETEVALDD 411


>gi|256375836|ref|YP_003099496.1| histidyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255920139|gb|ACU35650.1| histidyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 421

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 98/468 (20%), Positives = 177/468 (37%), Gaps = 68/468 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  D           +  ++       G+  IE P+ E +    + + +  D  +K +
Sbjct: 8   PKGVPDYFPPNSAAFTAVRSALLGATARAGYGYIELPVFEDTALFARGVGESTDVVSKEM 67

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D  G+ I+LR + TA + R V E+       P +       FR E+   GR+RQF 
Sbjct: 68  YTFTDRGGRSITLRPEGTAGVMRAVIEHGLDRGQLPVKLAYAAQFFRAEQPQAGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEK 181
           Q  V+ +G      DAE+  +  +   A+G            D       R+ L   L K
Sbjct: 128 QVGVEAIGVDDPALDAEVIAIADEGFRALGLTGYRLELTSLGDATCRPQYREKLQAFLAK 187

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + L  D +    +  LR +D         V+ L+ E                     +M+
Sbjct: 188 LPLDEDTRRRAEINPLRVLDDKRP----EVRELVAE-------------------APLML 224

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             LS +  +    +   +                            +   +  +VRGL+Y
Sbjct: 225 DNLSPETLEHYERVKAHLGDL-----------------------GVKYVENPRMVRGLDY 261

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E +                 +GGGGRYDGL+++  GQ +   GF +G+ R ++A
Sbjct: 262 YTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQELSGVGFGLGVDRALLA 313

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
            +    +  ++       +  +     + S+       LR AG+R +M  G  K     +
Sbjct: 314 CQVEGLAVGDVTRCD---VYGVPLGDAARSRLVGIGAPLRAAGVRYDMAYG-GKGLKGAM 369

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K ADR     A++ G  +   G++Q+K+LA G++    + +  +    
Sbjct: 370 KGADRSGARFALVLGERDIEAGVVQLKELATGEQREVPLDDVVTEVRG 417


>gi|160878710|ref|YP_001557678.1| histidyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|189082289|sp|A9KIA5|SYH_CLOPH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|160427376|gb|ABX40939.1| histidyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 417

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 98/464 (21%), Positives = 186/464 (40%), Gaps = 54/464 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G  D     +  R  I +  R + + Y    I TP+ E++    + + +  D 
Sbjct: 1   MITQRPKGTLDWYGDNMYKRTLIEELARKLCKAYNIKEIITPVFEHTILFQRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++  D   + I+L+ + TA   R   EN       P + + + P FR E+   GR
Sbjct: 61  VQKEMYTFLDKKDRSITLKPEGTAGAIRAYLENNLYAESGPTKLFYVTPAFRYEQPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQ  Q  V+ VGS +  A+ E+  ++   L+ +G+K+   HI     K       +  L
Sbjct: 121 LRQHHQFGVEFVGSKSPLAEVELITLITTFLKEIGLKKAKLHINSIGCKNCRATYNEALL 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
               K  + L         ++     ++  + + +     +  K A  T       + +L
Sbjct: 181 TYLRKHEDHLCST----CKERMQKNPLR--VIDCKESACKEIVKDAPRT-------IEYL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + +    EL  L+                          +   +I + IVRGL+YYT 
Sbjct: 228 DEECKNHFEELQSLL-----------------------HTLNIPFEIDTGIVRGLDYYTK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVALK 363
            V+E +                 + GGGRYDGLV    + Q++P+ GF +GI R++  L+
Sbjct: 265 TVFEFVNEDGFT-----------LCGGGRYDGLVHEIDEKQDIPSVGFGMGIERILYFLE 313

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E S         + +      +++ +        LR  GI  E      ++   Q+KY
Sbjct: 314 KEEVSLPPQPA---IELYVGILGAEAKASAYQLVTKLRGEGIITETDY-MDRSVKAQMKY 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++      +I G  E ++G+  +K++  G++    +++   + 
Sbjct: 370 ANKIGAKNTVILGADELAKGLANVKNMETGEQTELPLEDIADFI 413


>gi|189345839|ref|YP_001942368.1| histidyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|229558643|sp|B3EFA6|SYH_CHLL2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189339986|gb|ACD89389.1| histidyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 430

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 103/463 (22%), Positives = 180/463 (38%), Gaps = 59/463 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            ++ +G  D    EI     +   I  +   YGF+ I TP+ EY++   + +    D   
Sbjct: 4   YQVVKGARDIFPDEILQWKHVEGVIHRLAALYGFNEIRTPVFEYTELFQRSIGSSTDIVG 63

Query: 68  KGVFSLQ-DDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +FS   D  G+ I+LR ++TA + R   + N        + Y I  +FR E+   GR 
Sbjct: 64  KEMFSFLPDPSGRSITLRPEMTAGVMRAALQKNLLAAAPVQKLYYISELFRKERPQAGRQ 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI----GINNRKILDGILEK 181
           RQF Q   + +G S+  A AE+   M    E +G++     I     +++RK     L  
Sbjct: 124 RQFSQFGAELLGVSSPAAVAEVITFMMHVFEDLGLQGLKLRINTLGNMDDRKRYRDALRN 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 ++L          D   K   +   L + + +        K A         + 
Sbjct: 184 YLAPCYEQL----------DDASKERFEKNPLRILDSKNPEMQQIVKDA-------PKLY 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L                    G +  ++   +   +   G      +I   +VRGL+Y
Sbjct: 227 DYL--------------------GREALDDFEKVLFYLSARGIP---FQIDHRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG-LVSRFKGQNVPATGFSIGISRLIV 360
           Y+   +E                  ++GGGGRYD   V       VPA+GF++G+ RL++
Sbjct: 264 YSYTAFEVTSSA--------LGAQDALGGGGRYDSLAVELGSSGEVPASGFAVGMERLLI 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           A++     ++       V +       +   +       LR AGI A + L + ++   Q
Sbjct: 316 AMQKQGLFSDLDAAAPSVFVIV--QQEELFDQALEIVTTLRRAGISAVIDL-AGRSMKAQ 372

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           L+ A+R N   A+  G+ E + G   +KDL    +    ++  
Sbjct: 373 LREANRMNAANALFVGSDELASGKCTMKDLRSSLQDEYFLEEI 415


>gi|317055191|ref|YP_004103658.1| histidyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447460|gb|ADU21024.1| histidyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 440

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 102/460 (22%), Positives = 180/460 (39%), Gaps = 58/460 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + P+G AD    +    + I        E YGF  I  P  E +    + + +  D   
Sbjct: 4   IQRPKGTADMLPSQAYKWHTIEKLASETAEQYGFREIRVPAFEETGLFLRSVGETTDVVQ 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++++        +LR + TA + R + EN      FP + + +   FR+E    GR R
Sbjct: 64  KEMYTVTATGDSEFTLRPEGTAGVMRAMIENGLLNEAFPQKVFYLINCFRHENVQKGRLR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKI 182
           +F Q   + VGS+   ADA++  M    ++ +G++      +       R      L + 
Sbjct: 124 EFHQFGCEMVGSADAKADADVISMAKSFMDRIGLRDIELNINSIGCPTCRAKYQQALREY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                ++L +            K  L+   + L + ++    +  K A L       ++ 
Sbjct: 184 FGARREELCDTC----------KERLEKNPMRLLDCKSPICKEIGKNAPL-------IID 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  D      +L + +                       G       ++  IVRGL+YY
Sbjct: 227 YLCEDCNDHFEKLKKYL-----------------------GLMGIDFVVNPRIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  V+E I         +     G+V GGGRYDGL+    G+ VPA GF++GI RLI+ +
Sbjct: 264 TRTVFEFI--------SKDIGAQGTVCGGGRYDGLIEELSGKAVPALGFAMGIERLILTM 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++        K      +       D+  K       LR  G   E  L   +    Q+K
Sbjct: 316 EAQNCDFMEAKTCD---LYIASMGDDAADKAMELAMKLRDEGYFVEYDL-MGRGIKPQMK 371

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           YA +      ++ G+ E   G  ++K++A G++   ++ +
Sbjct: 372 YAGKIGAKFVLVIGSSELETGCAKLKNMASGEQADIKLDD 411


>gi|295398027|ref|ZP_06808083.1| histidine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973785|gb|EFG49556.1| histidine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 430

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 96/471 (20%), Positives = 183/471 (38%), Gaps = 52/471 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + P+G AD   +++ + + I ++ R I   Y +  I TP+ E  +   + + +  D  +
Sbjct: 2   IQRPKGTADILPEDMNLWHFIEETARRILNQYRYFEIRTPMFESYELFSRSVGETTDVVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGR 124
           K ++   D   + I+L+ + TAP+ R   EN       V P + Y +GP+FR E+   GR
Sbjct: 62  KEMYDFYDKGNRHIALKPEGTAPIVRAYVENKLYAPEQVKPYKVYYMGPMFRYERPQSGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q  V+  G +    D E   +  D  +++ I+     I             +  +
Sbjct: 122 LRQFHQIGVEVFGEANAAKDVETIALAMDLFKSLNIQHIKLVINSLGDTSSRLAYRQALI 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                  E L    + +   +     +++L  + + D                  ++ +L
Sbjct: 182 DYLTPFTEEL----SEESKTRLHKNPLRVLDSKDKKDIE---------IVANAPSILDYL 228

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S +  K  +E+  L+                              +I   +VRGL+YY  
Sbjct: 229 SEESTKRFNEVQSLLTAL-----------------------GIEFEIDPNMVRGLDYYQD 265

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVAL 362
            ++E +    V           ++ GGG YDGLV       ++ P  GF +GI RLI+ +
Sbjct: 266 TIFEIMSEDKVF------GAQTTICGGGNYDGLVQEISDGKESAPGFGFGLGIERLILLM 319

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+ E    ++ E+    +  ++    +        Q +R AG  A+     +K    Q +
Sbjct: 320 KAQEVQVPDMHELD---VYVVNIGDGTDEAAMKVLQYVRHAGFSADRNFFGAK-PKKQFR 375

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            A++    L +  G  E     + +K +  GKE +  ++       +   +
Sbjct: 376 DANKLGADLVVTIGESELENNQITVKHMTSGKEAAYPLEKFADDFASIYQE 426


>gi|91214897|ref|ZP_01251870.1| histidyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91187324|gb|EAS73694.1| histidyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 458

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 138/485 (28%), Positives = 230/485 (47%), Gaps = 53/485 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR- 65
           +A +P+G  D    E+  R+ I+ +I   ++ +GF PIETP  E S++L GK+  + DR 
Sbjct: 4   KASIPKGTRDFSPLEVSRRHYIISAIEKHFKTFGFQPIETPTFENSETLMGKYGDEGDRL 63

Query: 66  -------------PNKGVFSLQDDDG-----QWISLRYDLTAPLARYVAENFDTIVFPCR 107
                         N  V+S QD           +L+YDLT P ARYV ++ + I FP +
Sbjct: 64  IFKILNSGDFLRKLNSDVYSSQDSLKLSTQISEKALKYDLTVPFARYVVQHQNEIDFPFK 123

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I  VFR ++   GRFR+F+QCD D +GS +   + E   +      ++G++     I
Sbjct: 124 RYQIQSVFRADRPQKGRFREFLQCDADVIGSDSLWQEVEFIQLYDAVFSSLGLEG--VTI 181

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +NNRKIL G+ E I     ++ ++ +    A+DKLDK G +GVK  + +          
Sbjct: 182 KMNNRKILSGLAEVI-----EESDKLVDFTVALDKLDKIGEEGVKKEMLDK--------- 227

Query: 228 KGANLTSEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++   +  +    S++ + S  +  L  L+  +  G+KG  EL  I + ++     
Sbjct: 228 ---GISENALKNIQPIFSLEGDFSTRIKLLKSLLSNSEVGQKGIQELEFIEKALQSLPLK 284

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK-GQ 344
             ++ +  T+ RGL YYTG ++E      V          GS+GGGGRYD L   F    
Sbjct: 285 MAKLDLDVTLARGLNYYTGAIFEISAPEKVK--------MGSIGGGGRYDDLTGIFGLKN 336

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +   G S G+ R+ + L+ L+     I+E   VL      +             LRT+ 
Sbjct: 337 KMSGVGVSFGLDRIYLVLEELDLFPKAIEESTKVLFINFGEEEAL--YALKAVNALRTSS 394

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           + AE++  ++K    Q+ YAD+RN P  ++ G+ E    +   KD+  G++ S  ++   
Sbjct: 395 VAAELYPDAAK-MKKQMTYADKRNIPYVVLAGSTEMESEVYNFKDMNSGEQESFNLEELI 453

Query: 465 SWREA 469
           +    
Sbjct: 454 NKLSN 458


>gi|148241257|ref|YP_001226414.1| histidyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166228625|sp|A5GQA2|SYH_SYNR3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|147849567|emb|CAK27061.1| Histidyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 414

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 91/460 (19%), Positives = 165/460 (35%), Gaps = 54/460 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D           +  + R  +       I TPLLE ++   + + +  D  
Sbjct: 3   QLQSLRGMVDLLPAATSRWQWLEQTAREHFRRSCIREIRTPLLEATELFARGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S  D   +  +LR + TA + R   ++        R +  GP+FR E+   GR R
Sbjct: 63  GKEMYSFNDRGDRSCTLRPEGTASVVRAAIQHGLLSQGAQRLWYGGPMFRYERPQGGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLH 185
           QF Q  ++ +G +   +D E   +  D LEA+GI      +    +R       + +   
Sbjct: 123 QFHQIGIEFLGFADPRSDVEAIAIAWDLLEALGITGLQLELNSLGSRVDRQTYRDALVGW 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             ++ N+        D   +     +++L  +                 +    +   LS
Sbjct: 183 LSERQNQLD-----ADSQQRLATNPLRILDSKNPQTQQ---------LLQDAPNLEQSLS 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               +   ++   +                                +  +VRGL+YY   
Sbjct: 229 DPSRERYEQVKAGLSAL-----------------------KIPYLCNPRLVRGLDYYGHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E                  +V GGGRYDGLV +  G      G+++G+ RL++ L   
Sbjct: 266 AFEIT--------SDALGAQATVCGGGRYDGLVEQLGGPAAACVGWAMGLERLMLLLGDE 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +          +  +   + + +      + LR  G   ++ L S   FG QLK A 
Sbjct: 318 SQQSQPPD------VVVISQGNAAEALAVPVARQLRQIGQAVDVDL-SGAGFGKQLKRAG 370

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +     A++ G  E S G LQ KDL  G   +  +++   
Sbjct: 371 KSGARWAVLIGDEEASSGQLQRKDLHSGDSSTIALQSLAE 410


>gi|317122078|ref|YP_004102081.1| histidyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315592058|gb|ADU51354.1| histidyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 453

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 98/459 (21%), Positives = 169/459 (36%), Gaps = 61/459 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           R + PRG  D   +E      +   IR++   +GF  + TP++E  +   + + +  D  
Sbjct: 3   RIQRPRGTYDVTPQEAPRWQALEARIRDVAARFGFGELRTPVIEARELFQRTVGETTDIV 62

Query: 67  NKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
            K ++ L      + + LR + TA   R   EN       P + + I P+FR+E+   GR
Sbjct: 63  QKEMYVLTPPGSDRQLVLRPEGTAAAVRAYLENGLHNGPQPVKLFYIQPMFRHERPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH-----IGINNRKILDGIL 179
           +RQ +Q  V+  G+   TADAE+  +       +G++  + H       +   +    +L
Sbjct: 123 YRQHVQFGVEIFGAGEATADAEIIALAVTLFAELGLEGLEVHLNSIGCPVCRPRYRQALL 182

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E       +            D   +     ++LL  +   D                  
Sbjct: 183 EYYRPRAAEL---------CSDCRARLETNPLRLLDCKVPADQPHKAG---------APR 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            V +L         +L   +                              ++ S +VRGL
Sbjct: 225 TVDYLCDACRDHFDQLQAALAALGIA-----------------------YRLDSGLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT  V+E   G              +V GGGRYDGL+    G   P  GF +G+ RL+
Sbjct: 262 DYYTRTVFEIKYGG--------LGAQDTVCGGGRYDGLIELLGGPPTPGVGFGMGLERLL 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L++L       +    +            ++     Q LR AG+  +M     ++   
Sbjct: 314 LTLEALGRVPGAARP---LHAFVAVTGQVPRARVLALVQDLRRAGLAVDMDH-VGRSLKA 369

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           QL+ A R     A+I G  E + G   ++ L  G +   
Sbjct: 370 QLRAAARLPVRYAVILGDEEWAAGQATVRHLESGAQRRV 408


>gi|239939952|ref|ZP_04691889.1| histidyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239986436|ref|ZP_04707100.1| histidyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291443383|ref|ZP_06582773.1| histidyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291346330|gb|EFE73234.1| histidyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 420

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 89/474 (18%), Positives = 173/474 (36%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D           + ++I     + G+  IETP  E  +   + + +  D  
Sbjct: 3   TFQAPKGTYDLTPPRSAKFLAVREAISAPLRDSGYGYIETPGFENVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++L    G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYTLTTKGGDQLALRPEGTASVLRAALEANLHKAGNLPVKLWYSGSYYRYERPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G+++         D       R+ L 
Sbjct: 123 YRHFSQVGAEAIGTEDPALDAELIILADQAYRSLGLRQFRILLNSLGDKECRPVYREALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  + +    +  LR +D         V+  L +                   
Sbjct: 183 SFLRDLDLDEETRRRIEINPLRVLDDK----RADVQKQLTD------------------- 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +  +L    +    E+  L+       +   +L                       V
Sbjct: 220 APKLRDYLCDACKAYHEEVRALLTAAGVAFEDDEKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPELPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++       +       +  +    ++          LR AGI A+   G  + 
Sbjct: 309 RTVLALEAEGV---ELDLPATTSVYAVPLGEEARRVLFGVVTELRRAGIAADFAFG-GRG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R      ++ G  + + G++Q+KD+  G++ +  +    +    R
Sbjct: 365 LKGAMKSANRSGARYTLVAGERDLAEGVVQLKDMESGEQSAVPLAEAAAELAKR 418


>gi|325954683|ref|YP_004238343.1| Histidyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437301|gb|ADX67765.1| Histidyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 469

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 129/494 (26%), Positives = 226/494 (45%), Gaps = 52/494 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDED-- 64
           +  +P+G  D    E+  R  I+ +I+  +  +GF PIETP  E   +L GK+  + D  
Sbjct: 5   KPSIPKGTRDFSPAEVNRRQYIIQTIQQQFVLHGFSPIETPSFENLSTLTGKYGEEGDRL 64

Query: 65  ---RPNKGVF-------SLQDDDGQWI-------SLRYDLTAPLARYVAENFDTIVFPCR 107
                N G +        L++ + Q +       +LRYDLT P ARYV ++ + I FP +
Sbjct: 65  IFKILNSGDYLSKVSDTILEEKNSQKLISHISDKALRYDLTVPFARYVVQHQNEITFPFK 124

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y+I PV+R ++   GR+R+F QCD D VGS +   + E   +      A+ +  +   I
Sbjct: 125 RYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLWQEVEFIGLYDAVFSALRLPVD---I 181

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            INNRKIL G+ E   +       + +    A+DKLDK G   VK  +            
Sbjct: 182 QINNRKILSGLAEVANISD-----QLIDFTVALDKLDKIGEDAVKQEML----------- 225

Query: 228 KGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
               ++ + I+++    S+    ++ + +L  L+  +  G+KG  EL  + E V   G +
Sbjct: 226 -SKGISPQAIELLSPLFSMQGNYQEQLTQLSSLLSTSEIGKKGIEELTFVFENVHHIGLD 284

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           + +++++ T+ RGL+YYTG ++E         + ++     S+GGGGRYD L   F  ++
Sbjct: 285 TAKLELNLTLARGLDYYTGAIFEV--------KSRQGEFSSSIGGGGRYDDLTGIFGLKD 336

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G S G+ R+ + L+ L    +            ++  S          + LR  G+
Sbjct: 337 ISGVGISFGLDRIYLVLEELNLFPDEKTSN-QTQALFINFGSQEAKTVTTLVKKLRREGV 395

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AEM+   ++    QL YAD+      +I G+ E      Q+K++  G +   + +    
Sbjct: 396 VAEMYPEEAR-MKKQLNYADKNKVAYVVIIGSEELKAQKAQVKNMETGDQFDLDFEALVP 454

Query: 466 WREARVAQITIPIS 479
           +     +  +    
Sbjct: 455 FFNQNNSSTSCKKD 468


>gi|331269254|ref|YP_004395746.1| histidyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125804|gb|AEB75749.1| histidyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 420

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 99/462 (21%), Positives = 182/462 (39%), Gaps = 56/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    +    + I   ++ +   Y    I TP+ E+++   + + +  D 
Sbjct: 4   MAIQAPKGTKDLLPMDSYKWHYIEGKLKGLASEYALREIRTPIFEHTELFERGVGETTDV 63

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + I+L+ + TAP AR   EN       P + +   PVFR E    GR
Sbjct: 64  VQKEMYTFKDKGDRSITLKAEGTAPAARAFIENGLFNEALPIKMFYFTPVFRYENVQKGR 123

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIG 183
            RQ  Q  V+  GSS  + DAE+  +     +  GI   + +I      +      + + 
Sbjct: 124 LRQHHQFGVEVFGSSEASVDAEIIGLAMRAFKEFGINNLELNINNIGCPECRKKYNDALR 183

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  ++ +E            ++    ++LL  + +               +   +++ +
Sbjct: 184 EYFKEQYDELCDTC-----KTRYERNPMRLLDCKNKK---------CKEIGKNAPVILDY 229

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D +     L   +                          S   K++  IVRGL+YYT
Sbjct: 230 VCDDCKNHFENLKTYLDAL-----------------------SIEYKVNPYIVRGLDYYT 266

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E I                +V GGGRY+GL+    G+  PA GF +GI RLI+ L 
Sbjct: 267 KTVFEIINND------------ITVCGGGRYNGLIEEIGGKPTPAVGFGMGIERLILTL- 313

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
               ++  I +   + I           +       LR  GI+AE     +K+   Q+KY
Sbjct: 314 --GENSIEIPKPQEMDIYVGSMGEKGKIESFKVVNALREKGIKAECDH-MNKSVKAQMKY 370

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++     ++I G  E   G + +K +  G++    + N + 
Sbjct: 371 ANKIEALYSMIIGDTEIEEGKVNLKRMEDGQQFEVSLNNLDE 412


>gi|58581874|ref|YP_200890.1| histidyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58426468|gb|AAW75505.1| histidyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 522

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 149/511 (29%), Positives = 234/511 (45%), Gaps = 69/511 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF PIETP+ E SD  L K   + +R
Sbjct: 54  IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPIETPVFELSDVLLTKSGGETER 113

Query: 66  PNKGVFSLQD----------------DDG-QWISLRYDLTAPLARYVAENFDTIVFPCRT 108
               V+ +Q                 + G   ++LR+DLT PLARYVAE+   + FP R 
Sbjct: 114 ---QVYFVQSTGALANAAAAADEGAENGGLPELALRFDLTVPLARYVAEHEHDLSFPFRR 170

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ + 
Sbjct: 171 YQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQ 230

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           +NNRK+L G  E +G+   +    +L VLR +DK+DK G   V+  L            +
Sbjct: 231 LNNRKLLRGFFESLGVAEGE---LQLAVLREVDKIDKRGADYVRDTL----------VGE 277

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRKS 282
           G  + +EQ+  +++F+++  E     L +L      V  +    +G  EL  + ELV+  
Sbjct: 278 GFGIAAEQVARILAFVAVRSEGHADALAQLQALEASVGASATLGEGIAELREVLELVKAL 337

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G       ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S + 
Sbjct: 338 GVPERAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYESLASHYT 389

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +P  G SIG++RL   L+         +     ++  M  D   L       + LR 
Sbjct: 390 KSRLPGVGISIGLTRLFWQLREAGLIQGIAESSVQAMVALM--DETRLDDVLDIARRLRI 447

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGI  E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL   ++       
Sbjct: 448 AGINTEVQM-EPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ------- 498

Query: 463 NESWREARVAQITIPISELVSTVKKILQENK 493
                     Q  +   EL ST+   L++ K
Sbjct: 499 ----------QFDVARDELASTLLVELEQAK 519


>gi|309790980|ref|ZP_07685520.1| histidyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226953|gb|EFO80641.1| histidyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 431

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 139/461 (30%), Positives = 217/461 (47%), Gaps = 41/461 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++     G  D     + +R  I  +I  + E YGF+P++TP++EY+++L   L
Sbjct: 1   MAKVQNIK-----GMRDHLPPAMMLRQYITRTITQVCERYGFEPLQTPVVEYAEALEGKL 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D+      ++  +D  G+ ++LRYD T PLAR VA+    I  P R Y +GP +R E+ 
Sbjct: 56  GDD---ESLIYRFEDHGGRRLALRYDQTVPLARVVAQYAGQITLPWRRYALGPSYRGERP 112

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F Q D D VGSS+  ADAE+  M+++TL A+G    D+   +N+R+I+ GI  
Sbjct: 113 ARGRYREFYQADADIVGSSSPLADAEIVAMLSETLAALGF--PDFVTLLNHRQIIGGIAR 170

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             GL           V RAIDK DK G  GV+  L                + +E  + +
Sbjct: 171 VSGLDE----VAAGSVYRAIDKFDKIGADGVREELLRS------------GVNAEAAEHI 214

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++ + I+    + + EL   +            L  I   + + G  ++R KI+  + RG
Sbjct: 215 LALVQIEGSSAEILAELEARLDHDARATAAIANLRAIIHGLEQMGVPASRYKIAPRLARG 274

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L YYTG V+EAI               GS+ GGGRYD LV +F G+++P  G + GI RL
Sbjct: 275 LSYYTGMVFEAITPHWPE---------GSLLGGGRYDELVGQFAGRSLPTVGLAFGIDRL 325

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++ L             +       +          +    AG+   + L      G
Sbjct: 326 HDVMEELNLGPRPTSTAVAYVTCFSPELAAESLALAAELRA---AGVNTLINLDGGG-LG 381

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            Q K ADR+    A++ G  E +RG + +KDL  G + + E
Sbjct: 382 KQFKEADRKGVRYALVIGPDEVTRGEVVVKDLRDGTQRTVE 422


>gi|313902373|ref|ZP_07835776.1| histidyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467304|gb|EFR62815.1| histidyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 437

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 99/473 (20%), Positives = 172/473 (36%), Gaps = 61/473 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           R + PRG  D   +E      +   IR++   +GF  + TP++E  +   + + +  D  
Sbjct: 3   RIQRPRGTYDVTPEEAPRWQALEARIRHVAARFGFGELRTPVIEARELFQRTVGETTDIV 62

Query: 67  NKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
            K ++ L      + + LR + TA   R   EN       P + + I P+FR+E+   GR
Sbjct: 63  QKEMYVLTPPGSDRQLVLRPEGTAAAVRAYLENGLHNGPQPVKLFYIQPMFRHERPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH-----IGINNRKILDGIL 179
           +RQ +Q   +  G+   TADAE+  +       +G++  + H           +    +L
Sbjct: 123 YRQHVQFGAEIFGAGEATADAEIIALAMTLFAELGLEGLEVHLNSIGCPACRPRYRQALL 182

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E       +            D   +     ++LL  +   D                  
Sbjct: 183 EYYRPRAAEL---------CADCRARLETNPLRLLDCKVPADQPHKAG---------APR 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            V +L  D      EL   +                              ++   +VRGL
Sbjct: 225 TVDYLCQDCRAHFDELQSALDALGIA-----------------------YRLDPGLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT  V+E   G              +V GGGRYDGL+    G   P  GF +G+ RL+
Sbjct: 262 DYYTRTVFEIKYGG--------LGAQDTVCGGGRYDGLIELLGGPPTPGVGFGMGLERLL 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L++        + +               ++     Q LR  G+  +M     ++   
Sbjct: 314 LTLEAAGRPPGARRPLDA---YVAVAGQVPRTRVLALVQALRHQGLAVDMDH-VGRSLKA 369

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           QL+ A R     A+I G  E +RG   +++LA G++    +    +      A
Sbjct: 370 QLRAAGRLPVRYAVILGDDEWARGEAAVRELASGQQRRVPLGELAAVLRPAGA 422


>gi|70732277|ref|YP_262033.1| histidyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|83305875|sp|Q4K6V0|SYH_PSEF5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|68346576|gb|AAY94182.1| histidyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 429

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 99/487 (20%), Positives = 184/487 (37%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRYFEGTVARLLDNYGYKQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++ +D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           +   GR+RQF Q   +         DAE+ ++       +G                   
Sbjct: 117 RPQKGRYRQFHQIGCEVFNLDGPDIDAELIVLTWRLWGELGIRDAVKLELNSLGTAEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +       +    
Sbjct: 177 RYRDALVEFLSARMDKLDE------------DSQRRLKTNPLRVLDTK-------NPDTQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDEESRVHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          K    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQMGGKPTSGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++GI RL++ L++LE     I     V +      ++  +      + +R     +R 
Sbjct: 305 GFAMGIERLVLLLETLEQVPEEISRQVDVYLCAFGEAAELAALALS--ERVRDQLPNLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E ++ ++  K L  +G++ S       + 
Sbjct: 363 QINAGAG-SFKSQFKKADKSGALYALILGDDELAQQVVGFKPLRGQGEQQSIAWDALAAH 421

Query: 467 REARVAQ 473
               V Q
Sbjct: 422 LATCVVQ 428


>gi|188576568|ref|YP_001913497.1| histidyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|83305882|sp|Q5H0L6|SYH_XANOR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229470705|sp|B2SKP3|SYH_XANOP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|188521020|gb|ACD58965.1| histidyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 470

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 149/511 (29%), Positives = 234/511 (45%), Gaps = 69/511 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF PIETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPIETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQD----------------DDG-QWISLRYDLTAPLARYVAENFDTIVFPCRT 108
               V+ +Q                 + G   ++LR+DLT PLARYVAE+   + FP R 
Sbjct: 62  ---QVYFVQSTGALANAAAAADEGAENGGLPELALRFDLTVPLARYVAEHEHDLSFPFRR 118

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ + 
Sbjct: 119 YQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQ 178

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           +NNRK+L G  E +G+   +    +L VLR +DK+DK G   V+  L            +
Sbjct: 179 LNNRKLLRGFFESLGVAEGE---LQLAVLREVDKIDKRGADYVRDTL----------VGE 225

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRKS 282
           G  + +EQ+  +++F+++  E     L +L      V  +    +G  EL  + ELV+  
Sbjct: 226 GFGIAAEQVARILAFVAVRSEGHADALAQLQALEASVGASATLGEGIAELREVLELVKAL 285

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G       ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S + 
Sbjct: 286 GVPERAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYESLASHYT 337

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +P  G SIG++RL   L+         +     ++  M  D   L       + LR 
Sbjct: 338 KSRLPGVGISIGLTRLFWQLREAGLIQGIAESSVQAMVALM--DETRLDDVLDIARRLRI 395

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGI  E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL   ++       
Sbjct: 396 AGINTEVQM-EPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ------- 446

Query: 463 NESWREARVAQITIPISELVSTVKKILQENK 493
                     Q  +   EL ST+   L++ K
Sbjct: 447 ----------QFDVARDELASTLLVELEQAK 467


>gi|270156687|ref|ZP_06185344.1| histidyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289164866|ref|YP_003455004.1| histidyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269988712|gb|EEZ94966.1| histidyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288858039|emb|CBJ11899.1| histidyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 425

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 97/485 (20%), Positives = 182/485 (37%), Gaps = 65/485 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           R +  RG  D       +   +     ++   YG+  I  PL+E +    + + +  D  
Sbjct: 4   RIQAIRGMNDVLPDATPLWRTLEQVFIHVLTRYGYQEIRFPLVESTQLFKRTIGEVTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  I+LR + TA   R   E+        + + +GP+FR+E+   GR+R
Sbjct: 64  EKEMYTFNDLNGDSITLRPEGTAGCVRACLEHGLLHNQQQKLWYMGPMFRHERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+  G S    + E+  +     E +G    D  + +    + +          
Sbjct: 124 QFNQLGVEAFGMSGAMIELELISICRKFWEQLGF---DNLVQLQVNTLGELSERHHYKKV 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +       L   D   +     +++L  +    +S                ++  L  
Sbjct: 181 LVEYLLDHENLLDEDSKRRLDRNPLRILDSKNPEMHS---------LLANAPKLIDVL-- 229

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                             GEK         + +      +   +++  +VRGL+YY   V
Sbjct: 230 ------------------GEKSRAHFKSFCDGLD---TLNISYEVNPVLVRGLDYYGHTV 268

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          K     +V  GGRYD LV +  G   PA GF++GI R+ + +++L 
Sbjct: 269 FEWVT--------DKLGSQATVCAGGRYDILVEQLGGNRTPAAGFALGIERIYLLMETLN 320

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQLKYAD 425
                 K+     I  +  +  ++ +     + +R    + E+ +  +  +F +Q K AD
Sbjct: 321 LLKQEEKKNT---IYIIATNDQAVMRGLKIAESIRNGYPKVEVLVNTAGGSFKSQFKKAD 377

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           +     A+I G  E  +  + IK+L  G E                 QIT+  + L   +
Sbjct: 378 KSGAHFALILGDDEMIQEQIGIKNLRSGTE-----------------QITVKQNMLHQVL 420

Query: 486 KKILQ 490
           K  L+
Sbjct: 421 KDYLE 425


>gi|227529956|ref|ZP_03960005.1| histidine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350141|gb|EEJ40432.1| histidine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 425

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 91/465 (19%), Positives = 174/465 (37%), Gaps = 51/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD       +  ++    R +++ +G+  I TP+ E  +   + + D  D 
Sbjct: 1   MEYQKPKGTADLLPGTTNLWEKVEKVAREVFDQFGYRGIRTPMFEDYNVFSRNVGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VEKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI-LDGILEK 181
           GR R+F Q  V+ + + +   D E+  M     +  G+      I     K   +   E 
Sbjct: 121 GRQREFHQIGVEALNNESPQIDVEVIAMAMQLFKRFGVPNVKLTINTLGDKQVREDYREA 180

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +        +E      + D  ++     +++L  +   D              Q   ++
Sbjct: 181 LINFLKPHYDEL-----SSDSQERMYRNPLRVLDSKDAGDQK---------IVAQAPSIL 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  + +    ++  L+K      +    +                       VRGL+Y
Sbjct: 227 DYLDEESQNYFDQVQSLLKELGIDYEIDTNM-----------------------VRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   ++E +   PV         + +V  GGRY+GL+++  G      GF +G+ RL++ 
Sbjct: 264 YNHTIFEIMSDSPVFG-----GGYTTVCAGGRYNGLINQLGGPEEGGIGFGMGVERLMLL 318

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+              + +     +    +        +R  G+ A+    S    G Q+
Sbjct: 319 LQQEN---PEFAPQDQLDVFFASANEAGDNLAFKILNQIRDKGVVADKDY-SGVKVGKQI 374

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           K A RRN     + G  E   G  Q+K+ A    +  +I +  + 
Sbjct: 375 KEAFRRNAKYFAVFGEREVDEGQFQLKNAATKDTVDVKIADFVAE 419


>gi|237750201|ref|ZP_04580681.1| histidyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229374095|gb|EEO24486.1| histidyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 442

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 131/456 (28%), Positives = 219/456 (48%), Gaps = 36/456 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++     GF D   +E   +  I++ +  ++ +YGF PIETP LEY+D L K   +E   
Sbjct: 6   IQPRTLSGFKDRLPQEAYAKASIVEKVSEVFLSYGFMPIETPHLEYADILVKQGSEE--I 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+D T PLAR++ ++   ++ P + Y IG VFR E+   GR+R
Sbjct: 64  QKELYRFRDHGDRDVALRFDQTVPLARFITQHRHELIMPFKRYVIGNVFRGERAQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS + + DAE+  ++  +L A+G++  ++ I IN+R IL+GI    GLH 
Sbjct: 124 EFTQCDFDFIGSDSLSCDAEILQVIYSSLNALGLQ--EFTIWINHRDILNGIFAYFGLHD 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + +       LR IDKLDK GL  V+  L +             N+T+E+   +   + I
Sbjct: 182 NVES-----GLRIIDKLDKIGLDEVQKELQKE-----------LNITAEKAQEICRLVMI 225

Query: 247 DLEKS----MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                      E+  L        KG  +L  +  ++     + +  +I+ +I RGL YY
Sbjct: 226 KQTSHYSDFFKEIAYLKDYNEILRKGLQDLESMFSILDDLELDISSCRINFSIARGLGYY 285

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG VYE  L         +    GSV  GGRYD L   F  + +   G SIG+ R    +
Sbjct: 286 TGIVYETTLN--------RLKSIGSVCSGGRYDNLTQSFSKERLSGVGASIGLDR---LI 334

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +L            V +  +  +    +      + LR + ++AE++  + K     L 
Sbjct: 335 AALMELELLELRGTMVRVLLIVTNEAYFAFAHKIAEALRHSNVKAEVYPDAVK-IKKSLG 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           YA+ +    +II G  E     L +K++  G ++ +
Sbjct: 394 YANAKGHEFSIIIGDEEFQTKTLSVKNMTSGIQIEK 429


>gi|34498992|ref|NP_903207.1| histidyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|39932055|sp|Q7NS89|SYH_CHRVO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|34104842|gb|AAQ61199.1| histidyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 423

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 97/492 (19%), Positives = 182/492 (36%), Gaps = 85/492 (17%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  +G  D    E        +++R +  +YG+  I TP++E +    + + +  D  
Sbjct: 4   KYQAVKGMNDVLPAESYQWEYFEEALRKLLADYGYQNIRTPIVEGTPLFVRSIGEVTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D  +G  ++LR + TA   R V E+        + + +GP++R+E+   GR+
Sbjct: 64  EKEMYTFVDSLNGDSLTLRPEGTAGTLRAVVEHNLLYNATPKLWYMGPMYRHERPQKGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q  V+ +G +    DAE+  M AD    +GI +          +      +R+ L 
Sbjct: 124 RQFHQVGVEALGLAGPDIDAEIIAMTADLWRRLGISQYVRLEINSLGNAEERAAHREALI 183

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             LE+     D+            D   +     +++L  +                   
Sbjct: 184 AYLERHVDILDE------------DGKRRMHTNPLRVLDTKNPALQEMA---------NA 222

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +  +L  +          ++                                +  +V
Sbjct: 223 APKLSDYLGEESRAHYEGWKAMIAAL-----------------------GIEYIENPRLV 259

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +               G++  GGRYDGL+ +  G+     GF +G+ 
Sbjct: 260 RGLDYYNRSVFEWVTSE--------LGAQGTICAGGRYDGLIEQLGGKAASGIGFGMGME 311

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+++ L+              V +  ++    +        Q LR AG      LG + +
Sbjct: 312 RVLLLLQDKGLLPAQRS----VDVFLVNQGEGAGLYSMKLAQTLRAAGYSVVQHLGEA-S 366

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           F +Q+K AD      A+I G  E   G + +K L                  A VAQ T+
Sbjct: 367 FKSQMKKADGSGAEFALIVGENEIQAGQVVVKALR-----------------ADVAQQTV 409

Query: 477 PISELVSTVKKI 488
               +++T+  +
Sbjct: 410 AADAVLATLATL 421


>gi|156083601|ref|XP_001609284.1| histidyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796535|gb|EDO05716.1| histidyl-tRNA synthetase, putative [Babesia bovis]
          Length = 913

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 130/488 (26%), Positives = 224/488 (45%), Gaps = 42/488 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           + ++P+G  D    ++ +R+ ++D++++I++ +G   I+TP+ E  ++L GK+  D    
Sbjct: 452 KLKVPKGTVDILPDDMLVRSIVMDAVKSIFKQHGACEIDTPVFELRETLMGKYGED---- 507

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++ L+D  G+ + LRYDLT P AR++  N    +               +   GR R
Sbjct: 508 QKLIYDLKDTGGEQLCLRYDLTVPFARFLGTNKIEKMKRFHIG-KVYRRDEPQIQRGRLR 566

Query: 127 QFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           +F+QCD+D         ADAE+  ++   L  +      + I I +R ILD I+   G+ 
Sbjct: 567 EFVQCDLDYAGSYQLMLADAEVVYILIRILRMLCTS--TFVIKIGHRVILDAIMTHCGVP 624

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +        +  +IDKLDK     V+            +      L    ++ +  F+ 
Sbjct: 625 AE----MHRTICSSIDKLDKEPWSNVRE-----------EMISEKGLAVSAVESLKEFVE 669

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           I    S    Y   KG +      +E++++++ +   G   + I    ++ RGL+YYTG 
Sbjct: 670 IKGPISTVVEYLRNKGLVEASGALDEMLLLNQYLASFGAKDSEISFDLSLARGLDYYTGV 729

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           ++EA+L              GSVG GGRYDGL+    G+ VP+ G S+GI R++  L   
Sbjct: 730 IFEAVLTGT---------SVGSVGAGGRYDGLIGMLSGRQVPSVGMSLGIERIMRVLSQN 780

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           + S     ++  V + T+  D+  L +      +L  AGI AE       N   QL  A 
Sbjct: 781 KVS----SDVTDVFVCTVG-DATMLPERLRICSLLWDAGIAAEFHYNPRANLKKQLDAAT 835

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
            +   +A++ G  E S G ++IK L   +E  +     ES    R   + I  +E+V ++
Sbjct: 836 VKRAQVAVVVGMSEISEGTVRIKSLNYEEENIK----TESESTERPEDLVIGRTEMVHSI 891

Query: 486 KKILQENK 493
           K IL    
Sbjct: 892 KHILGRQG 899


>gi|262202241|ref|YP_003273449.1| histidyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085588|gb|ACY21556.1| histidyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 421

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 95/466 (20%), Positives = 173/466 (37%), Gaps = 69/466 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D          R+ D++ +     G+  IE P+ E +    + + +  D  +
Sbjct: 5   FQAPRGIPDYYPPASADFRRVRDTLTDAARRAGYGHIELPVFEDTALFARGVGESTDVVS 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R V ++       P +    GP FR EK   GR+R
Sbjct: 65  KEMYTFADRGDRSVTLRPEGTAGVMRAVIQHGLDRGQLPVKLSYAGPFFRYEKPQTGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  V+ +G      DAE+  +  +    +G            D       R+ L   
Sbjct: 125 QLQQVGVEAIGVDDPALDAEVIAVADEGYRRLGLSGFRLEITSLGDDESRPRYREALQQF 184

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  + L    +   +L  LR +D                         T  A L      
Sbjct: 185 LFGLDLDEPTRQRAQLNPLRVLDDK----------------RPEIKAATADAPL------ 222

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +LS D       +   +       +  + L                       VRG
Sbjct: 223 -LIDYLSDDARAHFELVLAHLDRLGVPYELNSRL-----------------------VRG 258

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISR 357
           L+YYT   +E +                 +GGGGRYDGL+ +    Q++   GF +G+ R
Sbjct: 259 LDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMRQLGGKQDLSGIGFGLGVDR 310

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
            ++AL++   +           +  +   + + ++       LR AGI  ++  G  +  
Sbjct: 311 TMLALEAEGVAGTEAARC---QVFGVPLGTAAKAELVGVAGQLRAAGISVDLAYG-DRGL 366

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +K ADR    +A++ G  E  + ++++K+L  G +    I + 
Sbjct: 367 KGAMKAADRSGAKIALVLGDREIEQRVVEVKNLTDGVQQQVCIDDV 412


>gi|237753042|ref|ZP_04583522.1| histidyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375309|gb|EEO25400.1| histidyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 434

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 136/453 (30%), Positives = 218/453 (48%), Gaps = 39/453 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
                 GF D   KE   ++++L SI   +E +GF PIETP LEY++ L K     D   
Sbjct: 3   TPRTLSGFKDRLPKEAYAKSKMLQSIVQSFEKFGFAPIETPHLEYAEILKKQG--SDEIQ 60

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++   D   + ++LR+DLT PLAR++A+  + +  P + Y IG VFR E+   GR+R+
Sbjct: 61  KEMYHFLDHGEREVALRFDLTVPLARFIAQYKNEVGIPFKRYCIGNVFRGERAQKGRYRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D +G+ +  AD E+  ++  +L  +G++  D+ I INNRKI +G++E +     
Sbjct: 121 FTQCDFDFIGTDSIGADVEILQVIYQSLFDLGLR--DFTIHINNRKIFNGLMESLNASN- 177

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                 + VLR IDK++K G + VK  L                L  + I +++ F++  
Sbjct: 178 ----HTIEVLRIIDKIEKIGKESVKQELQNKT-----------PLNLDSIAMLLDFIAKI 222

Query: 248 LEKSMHELYELVKG----TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            + S  EL + ++         + G +EL  + +++      +   KI+ +I RGL YYT
Sbjct: 223 QKGSALELLKELEAFRELNHTLKSGIDELSTLCKILD-PLIPAKFYKINLSIARGLGYYT 281

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G VYE  L              GSV  GGRYD L   F   ++   G SIG+ RL+  L+
Sbjct: 282 GIVYETTLNA--------LPSLGSVCSGGRYDNLTQNFSKDSLSGVGASIGLDRLLSGLE 333

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
            L    ++      +LI        SL       Q LR  G++ E+F   +K       Y
Sbjct: 334 ELNLIQSDKNVADTLLIPLH-----SLEYGYKVAQSLRDKGLKIEVFPEITK-PKKSFNY 387

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           A+ +     +I G  E  +    +K++  G++ 
Sbjct: 388 ANNKGYKFVVITGEEEEQQNTCTLKNMESGEQF 420


>gi|323699396|ref|ZP_08111308.1| histidyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459328|gb|EGB15193.1| histidyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 413

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 93/464 (20%), Positives = 177/464 (38%), Gaps = 60/464 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K++     GFAD   +E      +    R I+  YGF  + TP+LE ++   K +
Sbjct: 1   MAKVQKIK-----GFADLFPEEAAKYTFMEACAREIFSRYGFGELRTPILEKTELFQKSI 55

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNE 118
            +  D   K +F+  D   + +++R + TA + R   E+         + +  GP+FR E
Sbjct: 56  GEDTDVVGKEMFTFPDRKDRSLTMRPEATAGVVRAFIESKTYQPGNISKFFTFGPMFRYE 115

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR RQF Q + +  G+    ADAE+ +M+   L  +G++     +           
Sbjct: 116 RPQKGRQRQFHQINAECFGADEPQADAELILMLTAFLRRIGLRDLTVELNSLGCHECR-- 173

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
                    D  + +       D   +     +++L  + +     +  K A +      
Sbjct: 174 -PAYKQALVDYYHAQDKAKFCEDCQRRMETNPLRVL--DCKVPTCKELVKDAPV------ 224

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   L  D      ++  ++ G                             ++  +VRG
Sbjct: 225 -ITDHLCPDCRAHFADVRAVLDGAGVA-----------------------YVLNPRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY    +E                  SV GGGRYDGL+    G + P TGF+ G+ RL
Sbjct: 261 LDYYVRTCFEVTSND--------IGAQTSVAGGGRYDGLIRSLDGPDCPGTGFACGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + L                         ++ ++  ++ Q LR  G+R E+   +  +  
Sbjct: 313 ALLL--------GDVAPEAPDFYLAVVAPEAANEAMLFAQALRNKGLRGEVSF-AGGSMK 363

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIK 461
           ++++ A++      +I G  E +   + +KD+A   ++ + +  
Sbjct: 364 SRMRAANKSGAGTCLILGEAELADRTVTVKDMAGNREQETLDRA 407


>gi|148260022|ref|YP_001234149.1| histidyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|166227940|sp|A5FX98|SYH_ACICJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|146401703|gb|ABQ30230.1| histidyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 411

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 93/459 (20%), Positives = 171/459 (37%), Gaps = 58/459 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D   ++ R  + ++++ R +   YG     TP+ E +    + L +  D  
Sbjct: 3   KPQPVRGTQDIIGEDARRHHHVVETARRVAGLYGAAEWATPVFELTSVFARNLGETSDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ +D  G+ ++LR + TA + R +  N  T   P + +  GP+FR E+   GR+R
Sbjct: 63  TKEMYTFEDRSGESVTLRPEGTAGVCRALVSNGLTQTLPQKIFYQGPMFRYERPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI--KRNDYHIGINNRKILDGILEKIGL 184
           QF Q  ++ +G++   ADAE        L+ +G+      +   + +R   D     +  
Sbjct: 123 QFHQIGLEIIGAAEPLADAEAIACGQQILDELGVGASITLHINTLGDRDSRDAYRTALVD 182

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           +     +E      + +   +     +++L  +   D              +   +   L
Sbjct: 183 YLSRYESEL-----SDESKVRLVKNPLRILDTKDANDI---------RLLAEAPRIYDHL 228

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +         L   +                                +  IVRG +YY  
Sbjct: 229 NPASAAFYDGLKAALSAFGIA-----------------------FVENPRIVRGFDYYNH 265

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +               G+V GGGRYD LV +  G   P  G++ GI RL + L +
Sbjct: 266 TAFEFVSTA--------LGAQGTVLGGGRYDQLVEQMGGPPTPGVGWAAGIERLAMLLAA 317

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             ++           +  +       +        LR AGI AE       N   +L+ A
Sbjct: 318 TPATPRP--------VAVIPMGEAEQTAAIEILATLRRAGIAAEAAYRG--NLKKRLERA 367

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +R N   A++ G  E +RG + +K L  G +        
Sbjct: 368 NRINARAAVLIGADELARGAVTLKTLDDGAQRELPRAEL 406


>gi|254514000|ref|ZP_05126061.1| histidyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676243|gb|EED32608.1| histidyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 426

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 109/492 (22%), Positives = 189/492 (38%), Gaps = 79/492 (16%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
               RG  D    E      + + +  + E YG+  +  PL+E +    + + +  D   
Sbjct: 4   LRSIRGMNDILPTEANHWQFLENRVAELLERYGYGELRLPLVEPTALFSRSIGEVTDIVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++S +D +G  +SLR + TA   R   +N        R +  GP+FR E+   GR RQ
Sbjct: 64  KEMYSFEDRNGDSMSLRPEGTAGCVRAAIQNNLIANPC-RLWYSGPMFRYERPQKGRQRQ 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKI 182
           F Q   +  G +   ADAE+ +++A     +GI        +    +  R      L   
Sbjct: 123 FHQIGAEIFGYATPDADAELIILLARLWRVLGIADAVSLEINSIGSLEARAAYRAALVSY 182

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D L+E        D   +     +++L  +    ++      A    + +D    
Sbjct: 183 LEQHRDALDE--------DSQRRLLTNPLRILDSK--NPDTQALLNDAPALEDYLD---- 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                  E+       +   +  +G       ++  +VRGL+YY
Sbjct: 229 -----------------------EESMEHFAALRSYLDTAG---VSYTVNPRLVRGLDYY 262

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E +          K    G+V  GGRYDGLV +  G+  P  GF++G+ RL++ L
Sbjct: 263 NKTVFEWVT--------DKLGAQGTVCAGGRYDGLVQQLGGRATPGVGFAMGLERLLLML 314

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQ 420
           +          E     I  +    ++        + LR A   +R    LG   +F +Q
Sbjct: 315 EVCGQLP----EAKAPDIFVVTSGPEAQQAAIAALEHLRDAQPALRIVQQLGGG-SFRSQ 369

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           +K ADR    LA++ G  E + G + +K L  G+E                 Q+ +P+  
Sbjct: 370 MKKADRSGATLALLWGEDEVAAGEVTVKPLRDGQE-----------------QVRLPLVS 412

Query: 481 LVSTVKKILQEN 492
           L  T+  +LQ++
Sbjct: 413 LAQTIPSLLQQH 424


>gi|310821476|ref|YP_003953834.1| histidyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309394548|gb|ADO72007.1| Histidyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 435

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 107/477 (22%), Positives = 183/477 (38%), Gaps = 63/477 (13%)

Query: 8   RAELPRGFADCPTKEI-------RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           +    +G  D    E+            +  + R ++  +G+  I TP++E +    + +
Sbjct: 4   KLSGVKGMNDLLPGELGGEMAPIETWQYVERTARELFSRFGYGEIRTPMVEDTALFVRSV 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNE 118
            +  D   K +++ +D   + +SLR + TAP AR   E+    +    R Y +GP+FR E
Sbjct: 64  GEETDIVGKEMYTFEDKAQRSLSLRPEGTAPAARAYIEHSVANLEPVTRWYYMGPMFRYE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR+RQF Q   +  GS     D E+  M+   LEA+G+K    ++           
Sbjct: 124 RMKTGRYRQFFQIGAEAYGSREAAQDVELMDMVVQLLEALGLKEISLNLNSLGD------ 177

Query: 179 LEKIGLHGDDKLNERLIVLR---AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
            E        KL E L   R     D   +     +++L  + + +      +G+     
Sbjct: 178 -EACRPAFQKKLVEHLTAHRDALCADCQRRLEHNPMRVL--DCKNEKCQAVARGS----- 229

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++ FL    +    ++   +                            R  I+  +
Sbjct: 230 --PDILQFLCEPCQAHFADVRRKLDAL-----------------------KVRYVINPRM 264

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YYT   +E I   P +             GGGRYD LV    G +VPA GF +G+
Sbjct: 265 VRGLDYYTRTAFEFIASHPALGTASTVG------GGGRYDKLVKSLGGPDVPAVGFGLGL 318

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RL + L+      +   +     +     D  S  +       LR  G++ E       
Sbjct: 319 DRLTLLLREGGQRYSAPPD-----VFIAVADEGSQDEAFTLASRLRREGLKVEFD-TRGG 372

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  +Q+K AD+     A++ G  ER  G  Q+K +A G+ LS  +        A   
Sbjct: 373 SLKSQMKRADKTRARFALVLGEAERQAGRAQLKPMAGGEPLSVALGEIAQAVRAAPQ 429


>gi|85092169|ref|XP_959261.1| histidyl-tRNA synthetase, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|28920664|gb|EAA30025.1| histidyl-tRNA synthetase, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 482

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 120/502 (23%), Positives = 212/502 (42%), Gaps = 58/502 (11%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L+ + P+G  D    ++ +R ++  ++ ++++ +G  P++TP+ E  + L     ++  
Sbjct: 20  NLQIKTPKGTRDWHGPDMLLREQLFQTVSDVFKRHGGTPLDTPVFELREILAGKYGED-- 77

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPG 123
            +K ++ LQD  G+  SLRYDLT P AR++A    T     + Y I  V+R ++     G
Sbjct: 78  -SKLIYDLQDQGGELCSLRYDLTVPFARWLAM---TSTQQVKRYHIAKVYRRDQPAIARG 133

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R R+F QCD D  G           + +   +      +    I +N+RKILDG+    G
Sbjct: 134 RMREFHQCDFDIAGVYDPMIPDAEILRIIVEVFD--ALKLGITIKLNHRKILDGLFAVAG 191

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  +    +   +  A+DKLDK     VK  + E              L  E  D +  +
Sbjct: 192 VPAE----KIRTISSAVDKLDKMPWADVKKEMVEE-----------KGLPEEVADKIGVY 236

Query: 244 LSIDLEKS----MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +      +      +    +      + G +++ +++  +      ++++    ++ RGL
Sbjct: 237 VQNAGNITDIINYIKADADLPTNDDIKAGIHDMELLAAYLDAL-EVTDKVSFDLSLARGL 295

Query: 300 EYYTGCVYEAILGFPVMNEKQKPV---------VFGSVGGGGRYDGLVSRFKGQNVPATG 350
           +YYTG ++E I     + +  K             GS+  GGRYD LV  +  + +P  G
Sbjct: 296 DYYTGLIFEVINKPEPVADGDKKKKSKKDDPASQVGSIAAGGRYDNLVGMYGKKQIPCVG 355

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYTQMLRTAGIRA 407
            S GI R+   LK+   +    K    V +       D    L +     + L  AGIRA
Sbjct: 356 ISFGIDRIFTILKARGENDIK-KREVDVFVMAFGGGKDFDGLLVERMKIARQLWNAGIRA 414

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E    +      Q K A+    PL +I G  E   G +++K L +G             +
Sbjct: 415 EYMAKAKPKLQAQFKAAE--GTPLGVILGEEELKAGQVRLKKLDQG-------------Q 459

Query: 468 EARVAQITIPISELVSTVKKIL 489
             +     +PI +L   VKK+L
Sbjct: 460 GQKDEGNLVPIDDLADEVKKLL 481


>gi|290581366|ref|YP_003485758.1| histidyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254998265|dbj|BAH88866.1| histidyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 429

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 97/475 (20%), Positives = 178/475 (37%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D   +E      + +  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MTLQKPKGTQDILPQETVKWQYVENVARKTFKKYHYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + + IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVFYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V+  GS+    DAE   M       +GIK    H+       +RK     
Sbjct: 121 GRLREFHQLGVECFGSNNPAIDAETIAMAYQLFNELGIKDVTLHLNSLGNKESRKAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L    +   DKL++        D   +     +++L  + + D             E   
Sbjct: 181 LIDYLIPMKDKLSK--------DSQRRLEENPLRVLDSKEKEDKE---------AVENAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  D +     + ++++                              I + +VRG
Sbjct: 224 SILDYLDDDSQVHFQGVCDMLE-----------------------VLDIPYVIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I                ++  GGRYD LV  F G      GF +G+ RL
Sbjct: 261 LDYYNHTIFEFITQVDKSE--------LTLCAGGRYDSLVEYFGGPATAGFGFGLGLERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +   + +      +    +      + + S      Q +R  G  AE      +   
Sbjct: 313 LLVIDKQKINLPIDNSLD---VYIAVLGAAANSTALELIQAIRKQGFSAERDY-LGRKIK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD     L +  G  E   G + +K+    +E++   +  ++   +   Q
Sbjct: 369 AQFKSADVFKTKLIMTLGESEVETGQVAVKNNFTRQEIAVSFEEIKTDFASVFKQ 423


>gi|288958831|ref|YP_003449172.1| histidyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911139|dbj|BAI72628.1| histidyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 449

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 147/493 (29%), Positives = 221/493 (44%), Gaps = 57/493 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           +    P G  +   ++     R+LD+IR  YE +GF P+ETP+ E  D  L K   +   
Sbjct: 4   ITPRTPPGTMELLPRQQVAFQRMLDTIRRGYERFGFVPVETPVFETVDTLLTKSGGET-- 61

Query: 66  PNKGVFSLQD-----DDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             K V+ +Q         +  ++LR+DLT PLARYVAE+   + FP R Y+I  V+R E+
Sbjct: 62  -EKQVYFVQSTGAIQQGNKPELALRFDLTVPLARYVAEHERDLAFPFRRYQIQRVYRGER 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GRFR+F QCD+D +G    +A  +  +          +    + I +NNRKIL G+L
Sbjct: 121 AQRGRFREFYQCDIDVIGKDGLSAHYDAEIPAVIHHVFSELDFGGFTINVNNRKILLGLL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + +G+   D        LR IDKLDK G   V+  L             G  +T +  D 
Sbjct: 181 DGLGVADADTRVLV---LREIDKLDKIGQDKVRASLL------------GLGVTGQAADT 225

Query: 240 MVSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
           ++S + +     +++  L  L        +G  EL  + E +         ++I+  I R
Sbjct: 226 ILSLIDMKGTNAETLAALGALDIENALFREGVGELTTVIEGLNAFQVPEGTVRINLAIAR 285

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYTG VYE  L              GSV  GGRY+ L S +    +P  G SIG +R
Sbjct: 286 GLDYYTGTVYETFLND--------HPGIGSVCSGGRYENLASHYTKSKLPGVGISIGATR 337

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L   L                 I     D    + Y      LR AGI  E+ L   K  
Sbjct: 338 LFYQLMEAGLIK---DAAPTAQILVTQMDPALSADYFRMASELRAAGINTEIQLDGGK-I 393

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q+KYADR   P+ ++ G+ E++RG   +K L KG+++                   +P
Sbjct: 394 AKQMKYADRAGIPVVLLMGSDEKARGTATLKHLVKGEQV------------------EVP 435

Query: 478 ISELVSTVKKILQ 490
           ++EL +  K +L+
Sbjct: 436 LAELAARAKALLE 448


>gi|169350231|ref|ZP_02867169.1| hypothetical protein CLOSPI_00975 [Clostridium spiroforme DSM 1552]
 gi|169293014|gb|EDS75147.1| hypothetical protein CLOSPI_00975 [Clostridium spiroforme DSM 1552]
          Length = 425

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 112/466 (24%), Positives = 187/466 (40%), Gaps = 52/466 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D    +      +   IR I  NY    I TP+ E+++   + + D  D 
Sbjct: 1   MMYKAPRGTVDILPDKTIKWQMLEQLIRTICANYNVKEIRTPIFEHTELFNRAVGDTTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +++  D  G+ I+LR + TA +AR   EN          + Y IGP+FR E+   G
Sbjct: 61  VSKEMYTFNDKKGRSITLRPEGTAGVARAYVENKMFSNPDKITKLYYIGPMFRYERPQNG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF Q  V+ +G  +   D E   M    +EA+G+K    HI     +      E   
Sbjct: 121 RQRQFHQFGVEMIGYESPYLDVECMTMAVTLVEALGLKGVKLHINTLGDEQSR---EAYR 177

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               +     L  L   D  ++F    +++L  +   D+          + +     + +
Sbjct: 178 NALKEHFAPYLDEL-CSDCKNRFETNPLRILDCKVDCDHP---------SMKNAPKTIDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS   ++  +++ EL+       +    L                       VRGL+YY 
Sbjct: 228 LSETAKEHFNKVCELLDDLEIEYELDTNL-----------------------VRGLDYYC 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E I      ++  +     +VGGGGRY+GL+S   G   P  GF+ G+ RL++A+ 
Sbjct: 265 HTVFEVI------SDDPRLGAGSTVGGGGRYNGLISELNGPEAPGVGFAFGMERLLIAMD 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                   + E   + +  M   S +       T MLR  G   +M     ++   Q K 
Sbjct: 319 E------ELSEDEGLDVYVMPLGSKAKDLAMQITTMLRANGFSVDMDY-QDRSLKAQFKT 371

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            DR +   A+I G  E    ++ IK      +    I+N  ++ E 
Sbjct: 372 VDRMHSHFALIIGDQEVEDEVVNIKCTHSKTQDVVPIENIVAYIEN 417


>gi|294813118|ref|ZP_06771761.1| Histidyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326441583|ref|ZP_08216317.1| histidyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294325717|gb|EFG07360.1| Histidyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 442

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 135/479 (28%), Positives = 225/479 (46%), Gaps = 47/479 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKF 59
           M  + +       G  D    E   R R   +IR ++  YGF P++TP  E  + L GK+
Sbjct: 1   MVSQKQFDP--ASGTRDFLAAEHERRERAFATIREVFGRYGFQPLQTPAFERLEVLTGKY 58

Query: 60  LPDEDRPNKGVFSLQDDDGQW------ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
             + D   K +F +             ++LRYDLT PLAR VA   + +  P + Y I P
Sbjct: 59  GDEGD---KLIFKILRRGEHEATGEADLALRYDLTVPLARTVAAYGNQLPSPYKRYAIAP 115

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++ G GRFR+F+QCD+D VGSS+  +DAE+ + + D L+A+G+    +   +N+R+
Sbjct: 116 VWRADRPGKGRFREFVQCDLDIVGSSSPLSDAEVVLALHDALDALGVPG--FRFLLNSRR 173

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L G+LE  G+  D         L  +DKLDK   + V             +   G  L 
Sbjct: 174 VLFGLLEAYGVPAD----LGPGALITLDKLDKLAPEQV-----------VAELVTGRGLA 218

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            E    +V  L+     ++  +   +KG+  G+ G  E+  +   + K    + RI  + 
Sbjct: 219 EEVAQGLVDDLT--APDAVERIRGELKGSETGQAGLAEIDRLL-RLTKDTIPAERIAFTP 275

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YYTG ++E             P + GS+  GGRYD L++   G++ PA G S+
Sbjct: 276 NLVRGLDYYTGIIFEV----------SAPGMPGSIASGGRYDNLIATLGGKDAPACGGSL 325

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI R++  L        +      + +       +  +        +R AG+R  ++LG+
Sbjct: 326 GIERILPLLDH-----GDADGYAQIDVAVTVMGEELAADTFRLAAEIRRAGVRTGVYLGA 380

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           S  F  Q+K+A+ +     +I G  ER  G + ++D+  G++    +    +    R A
Sbjct: 381 SGKFRTQMKWANDQGARFCVIYGAAERDAGTVTVRDMESGEQTPFPLDQAATELARRCA 439


>gi|254388823|ref|ZP_05004055.1| histidyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197702542|gb|EDY48354.1| histidyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 485

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 135/479 (28%), Positives = 225/479 (46%), Gaps = 47/479 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKF 59
           M  + +       G  D    E   R R   +IR ++  YGF P++TP  E  + L GK+
Sbjct: 44  MVSQKQFDP--ASGTRDFLAAEHERRERAFATIREVFGRYGFQPLQTPAFERLEVLTGKY 101

Query: 60  LPDEDRPNKGVFSLQDDDGQW------ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
             + D   K +F +             ++LRYDLT PLAR VA   + +  P + Y I P
Sbjct: 102 GDEGD---KLIFKILRRGEHEATGEADLALRYDLTVPLARTVAAYGNQLPSPYKRYAIAP 158

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++ G GRFR+F+QCD+D VGSS+  +DAE+ + + D L+A+G+    +   +N+R+
Sbjct: 159 VWRADRPGKGRFREFVQCDLDIVGSSSPLSDAEVVLALHDALDALGVPG--FRFLLNSRR 216

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L G+LE  G+  D         L  +DKLDK   + V             +   G  L 
Sbjct: 217 VLFGLLEAYGVPAD----LGPGALITLDKLDKLAPEQV-----------VAELVTGRGLA 261

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            E    +V  L+     ++  +   +KG+  G+ G  E+  +   + K    + RI  + 
Sbjct: 262 EEVAQGLVDDLT--APDAVERIRGELKGSETGQAGLAEIDRLL-RLTKDTIPAERIAFTP 318

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YYTG ++E             P + GS+  GGRYD L++   G++ PA G S+
Sbjct: 319 NLVRGLDYYTGIIFEV----------SAPGMPGSIASGGRYDNLIATLGGKDAPACGGSL 368

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI R++  L        +      + +       +  +        +R AG+R  ++LG+
Sbjct: 369 GIERILPLLDH-----GDADGYAQIDVAVTVMGEELAADTFRLAAEIRRAGVRTGVYLGA 423

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           S  F  Q+K+A+ +     +I G  ER  G + ++D+  G++    +    +    R A
Sbjct: 424 SGKFRTQMKWANDQGARFCVIYGAAERDAGTVTVRDMESGEQTPFPLDQAATELARRCA 482


>gi|308272198|emb|CBX28804.1| Histidyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 417

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 89/463 (19%), Positives = 178/463 (38%), Gaps = 52/463 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            +L RG  D    EI +  +I  +  +++E++GF  I  P++E+++   + +  D D   
Sbjct: 2   IQLIRGVKDILPGEIGLWQKIEKTAISLFESFGFCEIRLPIIEHTELFARSIGQDTDIVE 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRI-GPVFRNEKHGPGRFR 126
           K +++  +   + I+LR + TA + R   ++    + P + +   GP+FR E+   GR+R
Sbjct: 62  KEMYTFLNKKDEMITLRPEATASIVRAYIQHRLYAIDPVQKFYTIGPMFRRERPQKGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + + +G  +   DA++  M+ + L+ + +      + +    +   +        
Sbjct: 122 QFYQINAEVLGVDSPLTDAQLIFMLVELLKRLSV----PDVCVYLNSLGCPVCRPGFKKS 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K       +   D   +     +++L  +                 +    ++  L  
Sbjct: 178 LQKFMSNTTAMLCSDCERRKEKNPLRVLDCK---------VLACREAMKDAPSIIEHLCN 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + E+    +   +       +    L                       VRGL+YYT   
Sbjct: 229 ECEEHFEAVKNSLNDLNIQFEIDKRL-----------------------VRGLDYYTRTT 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E                  +V GGGRYD L+    G + PA GF+IG  RL   + S  
Sbjct: 266 FEVHT--------GSLGAQSAVAGGGRYDRLIESLGGPSQPAIGFAIGFDRLAEIISSDN 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +  +   +     +        + +    ++  L  +GI+ E    S K    Q+K ADR
Sbjct: 318 AGVSCKPD-----LFIAALGEQARTNALKWSCALSLSGIKTETDF-SDKGLKGQMKKADR 371

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                 +I G  E S G   ++++   +++S  I       ++
Sbjct: 372 LAAGHVLIIGDNELSEGSAILRNMMTKEQVSVPIDGIVEKLKS 414


>gi|239932408|ref|ZP_04689361.1| histidyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291440774|ref|ZP_06580164.1| histidyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291343669|gb|EFE70625.1| histidyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 420

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 92/474 (19%), Positives = 172/474 (36%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + D+I     N G+  IETP  E  +   + + +  D  
Sbjct: 3   TFKAPKGTYDLIPPDSAKYLAVRDAIAAPLRNSGYGYIETPGFESVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++ +   G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYAFETKGGDRLALRPEGTASVLRAALEANLHKAGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G            D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLSDFRILLNSLGDQECRPVYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  D      +  LR +D       + V+  L                     
Sbjct: 183 DFLRGLDLDEDTLRRAEINPLRVLDDK----RESVQKQLTGT------------------ 220

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+ EL+       +   +L                       V
Sbjct: 221 -PLLRDYLCDACKTYHEEVRELITAAGVAFEDDPKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++        +      +  +    ++          LR  G+ A+   G  K 
Sbjct: 309 RTVLALEAEGVELQLPETTS---VFAVPLGEEARRVLFAKVTELRKNGVAADFAYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A R     A++ G  + + G++Q+K++  G++ +  +    +  E+R
Sbjct: 365 LKAAMKAAHRSGARYALVLGERDLAEGVVQLKNMESGEQTAVGVNEIVAELESR 418


>gi|20089821|ref|NP_615896.1| histidyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|32130123|sp|Q8TS62|SYH_METAC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|19914766|gb|AAM04376.1| histidyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 413

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 99/466 (21%), Positives = 179/466 (38%), Gaps = 53/466 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRG  D    +   R  +   +RN+  N+G+  I TP  E+ D       +    
Sbjct: 1   MTVNRPRGTRDFLPADTARRRYVESVMRNVVRNWGYSEIITPTFEHLDLFTLKSGEGIVG 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +++  D  G+ ++LR +LTAP+ R           P + +     FR E+   GRFR
Sbjct: 61  --ELYNFTDKGGRDMTLRPELTAPVMRLYVNELQPFPKPLKLFYFENCFRYERPQKGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +GS    +DAE+  +    L+AVGI      + + N  ++  +L+ +    
Sbjct: 119 EFWQFGVELIGSGKSDSDAEVIALADALLKAVGI---QGDMKLGNLAVIRTLLKGL---- 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +      V+R +DK +  GL+ +   +                   +    +   + +
Sbjct: 172 --EPEIVSKVMRLVDKKEYAGLESLLEEI---------------GAEEQLKSDLFHLIHL 214

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + +  + ++ E+V           ELV   + ++          +   I RGL+YYTG V
Sbjct: 215 EGKYILPKVKEIVGNIP-------ELVGFEKTLKLLDAYGVDYSLDFGIARGLDYYTGMV 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E           +       V GGG Y  L+  F G +VP+TGF IG  R++       
Sbjct: 268 FEVY--------AEGLGAQKQVCGGGSY-QLIQLFGGGDVPSTGFGIGFDRIMEI----- 313

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                           +     +  +       LR   +  ++ L   +NF  Q  YA+ 
Sbjct: 314 ----CPLVPPASKNLVLVSKPATHIEAVKVASELRNY-LPVQIDLME-RNFKAQFSYANT 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            N    +I G  E   G L ++D+  G++    ++        +  
Sbjct: 368 INADYVVIVGEKELEAGKLTLRDMVSGEQELLTLEEIIEKITGQQD 413


>gi|114566349|ref|YP_753503.1| histidine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318570|sp|Q0AYS2|SYH_SYNWW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|114337284|gb|ABI68132.1| histidyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 422

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 103/492 (20%), Positives = 203/492 (41%), Gaps = 76/492 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           ++ + PRG  D   ++      I   +R+  E++GF  I TPL E+++   + +    D 
Sbjct: 1   MQVKAPRGTYDILPQDSVKWQYIEKIMRDSAESFGFRAIRTPLFEHTELFQRGVGQGTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
            +K ++S  D   + ++LR + TAP AR + E+   + V P + Y +GP+FR ++   GR
Sbjct: 61  VSKEMYSFNDRSQRSLTLRPEGTAPCARALIEHGIYSGVMPVKWYYLGPMFRYDRPQTGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH----IGINNRKILDGILE 180
           +RQF Q  V+  GS++   DAE+ +++ + L  +G+   + H         R      L 
Sbjct: 121 YRQFHQFGVEAFGSNSPYLDAEIIILLVEILRRLGLDDYELHLNSLGCSVCRDDYRQKLL 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      ++L          D   ++    +++L  + + +      +G  +        
Sbjct: 181 QHISPFKEQL--------CQDCQQRYMQNPLRVL--DCKMETCHQAIRGYPI-------F 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L    ++    +   ++                                + +VRGL+
Sbjct: 224 YDHLCPYCQEHYSRVQAALQAN-----------------------GISYIHDNNLVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+   +E  L               +VGGGGRYDGLV    G ++P  GF++G+ RL++
Sbjct: 261 YYSNTAFEIHLPG--------IGAQSAVGGGGRYDGLVKELGGPDIPGIGFALGMERLLL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL  L  S  +   +    +  +  +     +       LR  GIRA+   G  ++   Q
Sbjct: 313 ALDMLGKSKFSNPSLD---VFVVVMNDAYEMQGLQLVNELRRRGIRADKDYG-GRSGKAQ 368

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           +KYA +      ++ G  E  +    ++D+   ++          W+  +         E
Sbjct: 369 MKYAGKTAARFVVMVGEEEVEKHFWTLRDMQSKEQ----------WQLGQ--------EE 410

Query: 481 LVSTVKKILQEN 492
           L+S+++ +++  
Sbjct: 411 LISSIRSVIETK 422


>gi|326403022|ref|YP_004283103.1| histidyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325049883|dbj|BAJ80221.1| histidyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 411

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 93/459 (20%), Positives = 171/459 (37%), Gaps = 58/459 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D   ++ R  + ++++ R +   YG     TP+ E +    + L +  D  
Sbjct: 3   KPQPVRGTQDIIGEDARRHHHVVETARRVAGLYGAAEWATPVFELTSVFARNLGETSDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ +D  G+ ++LR + TA + R +  N  T   P + +  GP+FR E+   GR+R
Sbjct: 63  TKEMYTFEDRSGESVTLRPEGTAGVCRALVSNGLTQTLPQKIFYQGPMFRYERPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI--KRNDYHIGINNRKILDGILEKIGL 184
           QF Q  ++ +G++   ADAE        L+ +G+      +   + +R   D     +  
Sbjct: 123 QFHQIGLEIIGAAEPLADAEAIACGQQILDELGVGASITLHINTLGDRDSRDAYRTALVD 182

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           +     +E      + +   +     +++L  +   D                 ++   L
Sbjct: 183 YLSRYESEL-----SDESKVRLVKNPLRILDTKDANDI---------RLLADAPLIYDHL 228

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +         L   +                                +  IVRG +YY  
Sbjct: 229 NPASAAFYDGLKAALSAFGIA-----------------------FVENPRIVRGFDYYNH 265

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +               G+V GGGRYD LV +  G   P  G++ GI RL + L +
Sbjct: 266 TAFEFVSTA--------LGAQGTVLGGGRYDQLVEQMGGPPTPGVGWAAGIERLAMLLAA 317

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             ++           +  +       +        LR AGI AE       N   +L+ A
Sbjct: 318 TPATPRP--------VAVIPMGEAEQTAAIEILATLRRAGIAAEAAYRG--NLKKRLERA 367

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +R N   A++ G  E +RG + +K L  G +        
Sbjct: 368 NRINARAAVLIGADELARGAVTLKTLDDGAQRELPRAEL 406


>gi|257064756|ref|YP_003144428.1| histidyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256792409|gb|ACV23079.1| histidyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 464

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 103/477 (21%), Positives = 191/477 (40%), Gaps = 64/477 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    P G AD      R+  R + +   ++ +YG++PIETPL E ++   + + +  D 
Sbjct: 1   MPYNCPEGTADLLPASARLWQRAVSTATKLFSSYGYEPIETPLFELTEVFTRGIGEATDV 60

Query: 66  PNKGVFSL-------------QD---DDGQWISLRYDLTAPLARYVAENFDTIVF--PCR 107
            NK +F +              D      Q ++LR + TA   R V ++        P +
Sbjct: 61  VNKEMFVVRSGENYKRALAAGNDDGLKSKQRLALRPEGTAGTVRAVVQHNLVEQGSAPAK 120

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            +  GP+FR E+   GR R+F Q   + +GS+  +ADAEM +M+    E +G+ R+D  +
Sbjct: 121 LFYYGPMFRAERPQKGRLREFHQIGAECLGSTEPSADAEMIIMLMRFYEKMGVPRSDMRL 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            IN+                             D+      + V+  +     D++ +  
Sbjct: 181 LINSMGD--------------------------DECRPAYREMVRRHIL----DHADEMC 210

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
           +     +E   +       D  K + E   ++   +  +   +    + + +  +G    
Sbjct: 211 EDCQRRAETNPLRAFDCKKDACKHVMESAPIITDHL-CDDCRSHYEAVKKHLDAAG---I 266

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
                 T+VRGL+YYT  V+E                  ++GGGGRYD L     G+  P
Sbjct: 267 EYIEDPTLVRGLDYYTRTVFEI-------QSTAIDAAQSAIGGGGRYDKLAETVGGRPTP 319

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             GF++G  R+++AL++  +  N  + +   +      +              R AG+  
Sbjct: 320 GLGFALGFERMVLALEAAGALGNTGRRIDGYIACV---NDSVRGAAFELLCAARDAGLTV 376

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           +M     K+   Q K ADR      +I G  E + G  +++D+    E   ++ + +
Sbjct: 377 DMDH-QGKSLKAQFKIADRLGASTVVILGPDELAEGKARVRDMGTHAESLVDLDSVK 432


>gi|76803150|ref|YP_331245.1| histidyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|121696645|sp|Q3IMP5|SYH_NATPD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|76559015|emb|CAI50613.1| histidine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 432

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 122/449 (27%), Positives = 187/449 (41%), Gaps = 37/449 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF +    E+  R  + D+I      YGF  + TP LE +        +E    + +++
Sbjct: 6   KGFREFYPGEMSARREVTDTIETRARRYGFREVGTPALERTQLYVDKSGEEIV--EELYA 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +D  G+ +SL  +LT  +AR V      +  P + +   P +R E+   GRFR+F Q +
Sbjct: 64  FEDKGGREVSLTPELTPTVARMVVAKQQALAKPVKWFSTRPFWRYEQVQQGRFREFYQTN 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +D  GS    ADAE+    AD L  +G+   D+   +++R IL G+L  +    D     
Sbjct: 124 IDIFGSERPEADAEVLATAADALTDLGLDGADFEFRVSHRDILGGLLAAMDSDVD----- 178

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               +RA+DK +K   +  + LL             GA LT E+ D   S L  D    +
Sbjct: 179 TTDAIRAVDKREKIDDEEYRSLL------------VGAGLTHEEADTFDSLLRTDDLSEL 226

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            E      GT   E     L  + +     G       +S    RGL+YYTG V+E    
Sbjct: 227 VE----FAGTDRVEAAVENLQAVLDAAADFGVRE-FCSVSLETARGLDYYTGVVFECFDT 281

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              ++         SV GGGRYD L+  F GQ  PA G  IG   L +  +         
Sbjct: 282 SGEVS--------RSVFGGGRYDDLIESFGGQPTPAVGVGIGHETLSLLCQRAGVWPAEE 333

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 ++T      D+        + LR  G   E  L S + FG+QL YAD  N    
Sbjct: 334 LSTDYYVLTV----GDTRDVALDVARELRALGHVVETDL-SDRGFGDQLSYADGINAETV 388

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  +     + +KD+A G +    + 
Sbjct: 389 VVVGEQDLEDDAVTLKDMASGDQTQVPLA 417


>gi|186685474|ref|YP_001868670.1| histidyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|229558699|sp|B2J5J5|SYH_NOSP7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|186467926|gb|ACC83727.1| histidyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 470

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 145/497 (29%), Positives = 221/497 (44%), Gaps = 52/497 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+    P GF +    E R+   +LD IR ++E+YGF PIETP +E  + L    
Sbjct: 1   MAKGDKINFSTPSGFPEFLPSEKRLELYLLDIIRRVFESYGFTPIETPAVERLEVLQAKG 60

Query: 61  PDEDRP----------------NKGVFSLQDDDGQW----ISLRYDLTAPLARYVAENFD 100
              D                  +K   + +D  G+      +L++D T PLA Y+A + +
Sbjct: 61  NQGDNIIYGIDPILPPNRQAEKDKSGETGKDKSGETGSEARALKFDQTVPLAAYIARHLN 120

Query: 101 TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
            ++FP   Y+   VFR E+   GRFRQF QCD+D V     +   +  M    T     I
Sbjct: 121 ELIFPFARYQTDMVFRGERAKDGRFRQFRQCDIDVVARRELSLLYDAQMPAIITEIFEAI 180

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
              D+ I INNRK+L G  + +G+  D    +    +  +D L+K G   VK  L +   
Sbjct: 181 NIGDFLIRINNRKVLTGFFKSVGITED----KIKSCINIVDNLEKIGESKVKQELEKE-- 234

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEK---GFNELVVI 275
                      ++ EQ   ++ F+ ID   ++ + +L  L       E+   G +EL  +
Sbjct: 235 ----------GVSGEQTQKIIDFIKIDGSVDEVLDKLKHLTLNLPETEQLSLGISELETV 284

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
              VR  G   NR  I  +I RGL+YYTG VYE  L              GS+  GGRY+
Sbjct: 285 IAGVRNLGVTENRFCIDLSIARGLDYYTGTVYETTLLG--------HEALGSICSGGRYE 336

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            LV  F G+ +P  G SIG++RLI  L      +        V++  M    D +  Y  
Sbjct: 337 ELVGVFLGEKMPGVGISIGLTRLISRLLKAGILSTLAATPAQVMVVNM--QEDLMPTYLK 394

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
            +Q LR AGI         +  G Q + AD++     +I G+ E +     +KDL  G++
Sbjct: 395 VSQHLRQAGINVITNFD-KRPLGKQFQLADKQGIQFCVIIGSEEAAAQKSSLKDLKSGEQ 453

Query: 456 LSREIKNNESWREARVA 472
           +   + N     + R++
Sbjct: 454 VEVLLVNLAEEVKRRLS 470


>gi|118444233|ref|YP_877921.1| histidyl-tRNA synthetase [Clostridium novyi NT]
 gi|166227963|sp|A0PZW9|SYH_CLONN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|118134689|gb|ABK61733.1| histidyl-tRNA synthetase [Clostridium novyi NT]
          Length = 416

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/465 (21%), Positives = 180/465 (38%), Gaps = 62/465 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    +    + I D ++ +   Y    I TP  E+++   + + +  D 
Sbjct: 1   MAIQAPKGTKDLLPMDSYKWHYIEDKLKKLAAEYALKEIRTPAFEHTELFERGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + I+L+ + TAP AR   EN       P + +   PVFR E    GR
Sbjct: 61  VQKEMYTFKDKGDRSITLKPEGTAPAARAFIENGLFNEALPIKMFYFTPVFRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILE 180
            R+  Q  V+  GS+  + DAE+  +     +   I       +       RK  +  L 
Sbjct: 121 LREHHQFGVEVFGSTEASVDAELIGLAMRAFKEFRIDNLELNINNIGCPECRKKYNDALR 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D+L +            +F    ++LL  + +               +   ++
Sbjct: 181 EYFRESYDELCDTC--------KTRFERNPMRLLDCKNKK---------CKEIGKDAPVI 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++  D       L   +                          + + K++  IVRGL+
Sbjct: 224 LDYVCDDCSNHFENLKTYLDSL-----------------------NIKYKVNPYIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E I                +V GGGRY+GL+ +  G+  PA GF +GI RLI+
Sbjct: 261 YYTKTVFEIINND------------ITVCGGGRYNGLIEQIGGKPTPAVGFGMGIERLIL 308

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L          KEM    I       +   +       LRT G++AE     +K+   Q
Sbjct: 309 TLMENNIEIPKPKEMD---IFIGSMGDNGKIEAFKLVNALRTKGLKAECDH-MNKSVKAQ 364

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +KYA++ +   ++I G  E       +K +  G++    + N + 
Sbjct: 365 MKYANKIDASYSMIIGDTEIEEKKANLKRMEDGQQFEVSLNNLDE 409


>gi|24380435|ref|NP_722390.1| histidyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|32130103|sp|Q8CWW2|SYH_STRMU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|24378462|gb|AAN59696.1|AE015032_1 histidyl-tRNA synthetase (histidine--tRNA ligase) [Streptococcus
           mutans UA159]
          Length = 429

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 98/475 (20%), Positives = 178/475 (37%), Gaps = 60/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D   +E      + +  R  ++ Y +  I TP+ E  + + + + D  D 
Sbjct: 1   MTLQKPKGTQDILPQETVKWQYVENVARKTFKKYHYGEIRTPMFERYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + + IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVFYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V+  GS+    DAE   M       +GIK    H+       +RK     
Sbjct: 121 GRLREFHQLGVECFGSNNPAIDAETIAMAYQLFNELGIKDVTLHLNSLGNKESRKAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L    +   DKL++        D   +     +++L  + + D             E   
Sbjct: 181 LIDYLIPMKDKLSK--------DSQRRLEENPLRVLDSKEKEDKE---------AVENAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  D +     + ++++                              I + +VRG
Sbjct: 224 SILDYLDDDSQAHFQGVRDMLE-----------------------VLDIPYVIDTNMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E I                ++  GGRYD LV  F G      GF +G+ RL
Sbjct: 261 LDYYNHTIFEFITQVDKSE--------LTLCAGGRYDSLVEYFGGPATAGFGFGLGLERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +   + +      +    +      + + S      Q +R  G  AE     S+   
Sbjct: 313 LLVIDKQKINLPVDNSLD---VYIAVLGAAANSTALELIQAIRKQGFSAERDY-LSRKIK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            Q K AD     L +  G  E   G + +K+    +E++   +  ++   +   Q
Sbjct: 369 AQFKSADVFKTKLIMTLGESEVETGQVAVKNNFTRQEIAVSFEEIKTDFASVFKQ 423


>gi|212212368|ref|YP_002303304.1| histidyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|229558652|sp|B6IZN1|SYH_COXB2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|212010778|gb|ACJ18159.1| histidyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 421

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 99/492 (20%), Positives = 186/492 (37%), Gaps = 78/492 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG +D   +EI   + + ++ R++   Y +  I  P++E +    + +
Sbjct: 1   MTKS----IQAIRGMSDTLPEEIPYWSFLENACRSVVSAYHYREIRFPVVEQTALFKRTI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEATDIVEKEMYTFTDRNGDSLTLRPEGTAGCVRAGIQNGLFYNQIQRLWYLGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    +AE+  M     +A+G++             +   L
Sbjct: 117 PQKGRYRQFYQLGVETYGMAGAPIEAELIFMCLRLWKALGLES-----------CIHLEL 165

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +G         + +V     +  +      + L                 L +E    
Sbjct: 166 NTLGTLDSRNAYRQALVTYLQSREKELDEDSRRRLHTNPLRILDSKNPDLQPLLAE-APK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L     +   +L  L+                               ++ T+VRGL
Sbjct: 225 LIDYLDETSRRHFDQLRSLLDQAEV-----------------------PFIVNPTLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT  V+E +          +    G+V  GGRYD LV    G++ PA GF+ G+ RL+
Sbjct: 262 DYYTHTVFEWVT--------DQLGAQGTVCAGGRYDNLVELLGGKSTPAAGFAAGLERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG----IRAEMFLGSSK 415
           + L+ ++           + I  +      + +  + T+ LR       I A++   S  
Sbjct: 314 LLLRGVQECL------DKIDIYVVIAGEAVIQEGLLMTEQLRNVLPEWVIEADL---SGS 364

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +  +Q K AD+     A++ G  E     + +K L                    V Q  
Sbjct: 365 SLKSQFKRADKSGAKWALVIGEEEIKTNTVTLKHLR-----------------ETVPQKN 407

Query: 476 IPISELVSTVKK 487
           +    L+S +K 
Sbjct: 408 LTRDTLISYLKS 419


>gi|41407150|ref|NP_959986.1| histidyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|46396582|sp|P60917|SYH_MYCPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|41395501|gb|AAS03369.1| HisS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 420

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 95/474 (20%), Positives = 181/474 (38%), Gaps = 68/474 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
                P+G  D    +      +   + +     G+  IE P+ E +    + + +  D 
Sbjct: 2   PEFSAPKGVPDYVPPDSAQFVAVRSGLLDAARRAGYGDIELPIFEDTALFARGVGESTDV 61

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
            +K +++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR
Sbjct: 62  VSKEMYTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGTLPVKLCYAGPFFRYERPQAGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILD 176
           +RQ  Q  V+ +G      DAE+  +      ++G            D       R++L 
Sbjct: 122 YRQLQQVGVEAIGVDDPALDAEVIAVADAGFRSLGLDGFRLEITSLGDDSCRPQYRELLQ 181

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  + +   RL  LR +D         V+ +  +                   
Sbjct: 182 DFLFGLDLDEETRRRARLNPLRVLDDKRP----EVRAMTAD------------------- 218

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             +++  LS                    +        +   +   G       I+  +V
Sbjct: 219 APVLLDHLS--------------------DAAKQHFDTVLAHLDALGVP---YVINPRMV 255

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                 +GGGGRYDGL+ +  GQ++   GF +G+ 
Sbjct: 256 RGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMRQLGGQDLSGIGFGLGVD 307

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++   S  +        +  +     +  +  +    LR AG+R +M  G ++ 
Sbjct: 308 RTLLALRAEGKSVGSAARCD---VFGVPLSDQAKLRLAVLAAGLRAAGVRVDMAYG-ARG 363

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               ++ ADR    +A++ G  +   G + +KDL  G ++S E+ +  +   ++
Sbjct: 364 LKGAMRAADRSGARIALVLGDRDIDAGTVGVKDLQTGSQVSVELDSVVAEVLSQ 417


>gi|119505388|ref|ZP_01627462.1| histidyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119458843|gb|EAW39944.1| histidyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 426

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 104/469 (22%), Positives = 193/469 (41%), Gaps = 56/469 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
               RG  D   ++  +  ++   +  + + YG+  I  P++E +    + + +  D   
Sbjct: 4   YRSVRGMVDILPEDTFLWQQLEAVMGTVLQQYGYQEIRLPIIEATQLFSRSIGEVTDIVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++  D +G+ +SLR + TA   R V ++        + +  GP+FR E+   GR RQ
Sbjct: 64  KEMYTFADRNGESLSLRPEGTASCVRAVVQHNLQQT-VQKLWYQGPMFRYERPQKGRQRQ 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+  G +    DAE+ ++       +G+           R++L   +  IG    
Sbjct: 123 FHQLGVEGFGVATPDLDAELILVSNALWRGLGV-----------RELLTLEVNSIGSPAA 171

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID-IMVSFLSI 246
             L                     +  L E  +D+       +    E     ++   ++
Sbjct: 172 RGLF--------------------REALVEFLSDHRTTLDDDSQRRLETNPLRILDSKNV 211

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D +  + +   L       E+  ++   +  ++  +G       ++  +VRGL+YY   V
Sbjct: 212 DTQALLTDAPAL--SDFLDEQSRDDFAALLAMLTAAGQP---YVVNERLVRGLDYYNKTV 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E                 G+V GGGRYDGLV++F G++ PA GF+IG+ RL++ LK LE
Sbjct: 267 FEWTT--------DALGAQGTVCGGGRYDGLVTQFGGRDTPAAGFAIGLERLVLLLKGLE 318

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYA 424
           +       +    I  +  D+ S        + LR A  G RA        +F +Q K A
Sbjct: 319 AQ-----SVPQTDIYVVTADAKSQLHALPRVEALRQALPG-RAIQAHLGGGSFKSQFKRA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREARVA 472
           DR     A++ G  E++   + +K L   G++++       ++     A
Sbjct: 373 DRSGARFALVYGESEQATESVTLKPLRSEGEQVTLPDNKVAAFLAESFA 421


>gi|32267308|ref|NP_861340.1| histidyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|39932097|sp|Q7VF68|SYH_HELHP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|32263361|gb|AAP78406.1| histidyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 442

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 133/454 (29%), Positives = 220/454 (48%), Gaps = 34/454 (7%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
                 GF D   KE   +  +L+ + N++ N+GF PIETP LEY+D L K     D   
Sbjct: 5   TPRTLSGFKDRLPKEALAKAHLLNKVSNVFMNFGFVPIETPHLEYADVLIKQG--SDEIQ 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++  +D  G+ ++LR+DLT PLAR+V++  + +  P + Y IG VFR E+   GR+R+
Sbjct: 63  KELYRFKDHGGRDVALRFDLTVPLARFVSQYKNEVGLPFKRYAIGNVFRGERAQRGRYRE 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D +GS + + DAE+  ++  +L  +G    ++ I +N+R IL+GI E  G+  +
Sbjct: 123 FTQCDFDFIGSDSISCDAEILQVIYASLMKLG--IEEFTIWLNHRSILNGICEYCGITQE 180

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI- 246
               +  + LR IDKLDK G + V   L +              L + Q++ ++ + SI 
Sbjct: 181 K---DINVALRIIDKLDKIGKERVSEELQKE-----------LGLNNNQVENLLEYTSIK 226

Query: 247 ---DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              + E    ++  + +   + +KG  +L ++ E++     + +  +++ +I RGL YYT
Sbjct: 227 QQGESESFFRQISFMEEWNDSIKKGIEDLKMLYEVLSSLQMDRDTYRVNFSIARGLGYYT 286

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G VYE  L              GSV  GGRYD L   F  + +   G SIGI RL+    
Sbjct: 287 GIVYETTLNA--------LKSIGSVCSGGRYDNLTRTFSKEKMSGVGASIGIDRLLA--- 335

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +LE      K         +  D        +  +  R + I  E++  +SK    Q  Y
Sbjct: 336 ALEELELLQKRATSARALIVCMDRLYFGYAHLLAESFRCSEIPIEVYPEASK-LKKQFTY 394

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           A  +     ++ G  E +   L +K++  G ++ 
Sbjct: 395 AHLKGYEFVVVIGENEFNTKTLTLKNMTSGVQID 428


>gi|282164426|ref|YP_003356811.1| histidyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282156740|dbj|BAI61828.1| histidyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 434

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 108/456 (23%), Positives = 196/456 (42%), Gaps = 35/456 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R +  +GF D   +E+  R ++LD I      YGF  +++P LE  +       DE   
Sbjct: 3   MRFQSLKGFRDFYPEEMSARRKVLDKIFETVRPYGFREVDSPSLEMLELFRVKSGDEILT 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
               F+  D   + ++L  +LT  +AR V E   ++  P + + +  ++R E+   GR R
Sbjct: 63  --QTFNFADKGKRDVTLIPELTPTMARMVVEREKSLKRPIKWFSMPKMWRYEEPQSGRLR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q +VD  G     ADAE+     D +  +      +   +++R+++ G+LE +G+  
Sbjct: 121 EFYQLNVDIFGVPGPEADAEVLAAGIDIMLKL-DLEGQFIFKVSDRRLMQGVLESMGIAD 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +      V  AIDK  K      K LL +            A+L   +I  ++S L  
Sbjct: 180 RREA-----VFAAIDKRYKVTHSEFKELLAK------------ADLDDLKIGQLLSILDS 222

Query: 247 DLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                +++ +L  L+       +   E +     +    +     ++  +++RGL YYTG
Sbjct: 223 RGPMLEALQKLRGLISLENEQTRAGYESLEKLTDLLVMYHMEQYCELDPSVIRGLAYYTG 282

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                  ++ GGGRYD ++  F G+ +PA GF +G + L + ++ 
Sbjct: 283 TVFECY---------DTKGELRAIFGGGRYDKIIELFGGEPMPAVGFGMGDAVLEILMRR 333

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +                +   +  +       Q LR      E  L   +NFGNQ+KYA
Sbjct: 334 AKVWPEEKLTTDY---FILTTSAQYMETALFLAQALREKEFIVETDL-LGRNFGNQMKYA 389

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           +       +I G  E + G + +KD+  G++ + E+
Sbjct: 390 NSIGAKYVLILGEKEMAGGQVSVKDMKTGEQRTEEV 425


>gi|223041968|ref|ZP_03612152.1| histidyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017225|gb|EEF15653.1| histidyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 414

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 101/479 (21%), Positives = 189/479 (39%), Gaps = 68/479 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             DC   E  +   +   +RN+  +YG+  +  P++E +    + + +  D  +K +++ 
Sbjct: 1   MNDCSPTETPLWQWVETKVRNVLASYGYSEVRMPIVESTPLFARAIGEVTDVVSKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D + + ++LR + TA   R   E         R + +GP+FR+E+   GR+RQF Q  V
Sbjct: 61  WD-NDEQLTLRPEGTAGCVRAAIERGWIYNNEQRLWYMGPMFRHERPQKGRYRQFHQAGV 119

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           +  G      DAE+ ++ A   +A+GI   D H+ +    I                 E+
Sbjct: 120 EVFGIPNPEIDAELIILTARLWKALGI---DQHVSLQLNSIGSLEARANYRSALVAFLEQ 176

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L + ++ ++     +++L  + +                    ++ +L  +  +   
Sbjct: 177 HQSLMSDEEKERLVKNPLRILDTKNQA---------LQEVLNDAPKLLDYLDEESREHFT 227

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +L  L+                            + +++  +VRGL+YY   V+E +   
Sbjct: 228 QLCSLLDA-----------------------MGIQYEVNPKLVRGLDYYNKTVFEWVTSA 264

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                       G+V GGGRYDGLV +  G      GF++G+ RL++ ++ +       K
Sbjct: 265 --------LGAQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLVLLVQEVNKDVPVAK 316

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADRRNCPL 431
               V +  +     +        + LR+    +R  M   S   F  Q K AD+     
Sbjct: 317 A---VDVYIVYSGEGATLNAFQIAETLRSELPDLRV-MTHCSGGKFQKQFKRADKLEAEF 372

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           A++ G  E +   + IKDL  G E                 QIT+P + LV+ ++K   
Sbjct: 373 ALVIGESEVTEKTVVIKDLRSGME-----------------QITVPQTALVAELQKRFS 414


>gi|150399673|ref|YP_001323440.1| histidyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166228584|sp|A6UQQ6|SYH_METVS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|150012376|gb|ABR54828.1| histidyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 418

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 120/458 (26%), Positives = 202/458 (44%), Gaps = 43/458 (9%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P+G  D    E++ R  I   +RNI+++Y F  I TP  E  + L K   +E R   
Sbjct: 2   FQKPKGTRDFLPVEMKKRKLIEKKLRNIFDSYNFSEINTPTFESFELLSKKTGEEIRN-- 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F   D   + + LR + T+ +AR+    F     P + Y  G  FR E    GR+R+F
Sbjct: 60  QLFVFNDHGNREMGLRPEFTSSVARFYINEFKNTPKPVKMYYFGNCFRYENPQAGRYREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +GS+   +DAE+  M  + L+++ +   D+ I I +  +L G+ EK  L  +D
Sbjct: 120 WQMGAELIGSNKSISDAEVLNMAIEGLKSINM---DFEINIGHLGVLKGVFEKYSLSEED 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +     ++ R IDK D  GL+ V L + E +                             
Sbjct: 177 E----TLIRRLIDKEDTEGLKQVLLKIEEEKNIEISKKVFEV------------LTLKGG 220

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++ + +L E +          N L  I ELV       +   ++  I RGL+YYTG V+E
Sbjct: 221 KEVISKLKEKLTDFEKSLDALNNLDEILELV------PHDYVVNFGIARGLDYYTGMVFE 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                       K      V GGGRYD L+  F+G+  PA GF+ G  R+I+ +   E  
Sbjct: 275 IY---------GKKEGARQVCGGGRYDNLIELFEGEKSPAVGFAYGFDRIILNIDDFEV- 324

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                +   + I  + +D   L +     + LR  G   E+ L   +     L YA+ +N
Sbjct: 325 -----QDDSIFIIPVKNDIFLLKECLKIAKTLRDFGNPVEIDL-MGRKLNKALNYANSKN 378

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
               II G  +   G + +K++  G+++  ++K+ +++
Sbjct: 379 IKRVIIIGENDIFSGKIPLKNMETGEQVLIDVKDLKNF 416


>gi|195978984|ref|YP_002124228.1| histidyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|229558734|sp|B4U0K6|SYH_STREM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|195975689|gb|ACG63215.1| histidyl-tRNA synthetase HisS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 426

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 97/471 (20%), Positives = 176/471 (37%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D  +        +    R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILSVAAAKWQYVEGVARETFKQYHYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGSANPATDVETIAMAYHLFERLGIKGVTLHLNSLGNAASRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + E L    + D   +     +++L  + + D          +    +  ++ 
Sbjct: 181 LIDYLSPMRETL----SKDSQRRLDENPLRVLDSKEKEDK---------IAVANVPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     +  +++                         +    I + +VRGL+YY
Sbjct: 228 YLDEESQAHFDAVRSMLEAL-----------------------AIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I                ++  GGRYDGLV  F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEVDQSE--------LTICAGGRYDGLVEYFGGPATPGFGFGLGLERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    ++E   V I  +  D++        TQ +R  G   E      +    Q K
Sbjct: 317 DKQGV-ELPVEEGLDVYIAVLGADANV--AALALTQAIRRQGFTVERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     + I  G  E   G   +K     +E++      ++   +  A+
Sbjct: 373 SADTFKAKVVITLGESEIKAGQAVLKHNQTRQEMTVSFDQIQTDFASIFAE 423


>gi|29654551|ref|NP_820243.1| histidyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154706491|ref|YP_001424685.1| histidyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|161831041|ref|YP_001597099.1| histidyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|39932162|sp|Q83C80|SYH_COXBU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189082290|sp|A9KFU6|SYH_COXBN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189082291|sp|A9NDV9|SYH_COXBR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|29541818|gb|AAO90757.1| histidyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154355777|gb|ABS77239.1| histidyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|161762908|gb|ABX78550.1| histidyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 421

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 98/492 (19%), Positives = 186/492 (37%), Gaps = 78/492 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG +D   +EI   + + ++ R++   Y +  I  P++E +    + +
Sbjct: 1   MTKS----IQAIRGMSDTLPEEIPYWSFLENACRSVVSAYHYREIRFPVVEQTALFKRTI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEATDIVEKEMYTFTDRNGDSLTLRPEGTAGCVRAGIQNGLFYNQIQRLWYLGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    +AE+  M     +A+G++             +   L
Sbjct: 117 PQKGRYRQFYQLGVETYGMAGAPIEAELIFMCLRLWKALGLES-----------CIHLEL 165

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +G         + +V     +  +      + L                 L +E    
Sbjct: 166 NTLGTLDSRNAYRQALVTYLQSREKELDEDSRRRLHTNPLRILDSKNPDLQPLLAE-APK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L     +   +L  L+                               ++ T+VRGL
Sbjct: 225 LIDYLDETSRRHFDQLRSLLDQAEV-----------------------PFIVNPTLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT  V+E +          +    G+V  GGRYD LV    G++ PA GF+ G+ RL+
Sbjct: 262 DYYTHTVFEWVT--------DQLGAQGTVCAGGRYDNLVELLGGKSTPAAGFAAGLERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG----IRAEMFLGSSK 415
           + L+ ++           + I  +      + +  + T+ LR       I A++   S  
Sbjct: 314 LLLRGVQECL------DKIDIYVVIAGEAVIQEGLLMTEQLRNVLPEWVIEADL---SGS 364

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +  +Q K AD+     A++ G  E     + +K L                    V Q +
Sbjct: 365 SLKSQFKRADKSGAKWALVIGEEEIKTNTVTLKHLR-----------------ETVPQKS 407

Query: 476 IPISELVSTVKK 487
           +    L+  +K 
Sbjct: 408 LTRDTLIPYLKS 419


>gi|225871432|ref|YP_002747379.1| histidyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254782346|sp|C0MB21|SYH_STRE4 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|225700836|emb|CAW95552.1| histidyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 426

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 96/471 (20%), Positives = 173/471 (36%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D           +    R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPVAAAKWQYVEGVARETFKQYHYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGSANPATDVETIAMAYHLFERLGIKEVTLHLNSLGNAASRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + E L    + D   +     +++L  + + D          +       ++ 
Sbjct: 181 LIDYLSPMRETL----SKDSQRRLDENPLRVLDSKEKEDK---------IAVANAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +     +  +++                         +    I + +VRGL+YY
Sbjct: 228 YLDEESQAHFDAVRSMLE-----------------------VLAIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I                ++  GGRYDGLV  F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEVDQSE--------LTICAGGRYDGLVEYFGGPATPGFGFGLGLERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    ++E   V I  +   ++        TQ +R  G   E      +    Q K
Sbjct: 317 DKQGV-ELPVEEGLDVYIAVLGAYANV--AALALTQAIRRQGFTVERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     + I  G  E   G   +K     +E++      ++   +  A+
Sbjct: 373 SADAFKAKVVITLGESEIKTGQAVLKHNQTRQEMTVSFDQIQTNFASIFAE 423


>gi|124024229|ref|YP_001018536.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166228594|sp|A2CCR1|SYH_PROM3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123964515|gb|ABM79271.1| Histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 436

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 95/450 (21%), Positives = 174/450 (38%), Gaps = 51/450 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   ++ R    +    R+ +   G   I TPLLE ++   + + +  D  
Sbjct: 3   QLQSLRGMVDLLPEQTRCWQAVESVARDHFRRAGLQEIRTPLLEVTELFARGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D   +  +LR + TA + R   ++      P R +  GP+FR E+   GR R
Sbjct: 63  GKEMYTFVDRGDRSCTLRPEGTASVVRAALQHGLLSQGPQRLWYGGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+ +G  +  +DAE+  +    L  +G++     I         G L+    + 
Sbjct: 123 QFYQIGVEYLGVGSPRSDAEVIALAWALLVDLGVQGLVLEINSL------GTLQDRQKYR 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++ +         +D   +  L    L + + +     +  + A         +   LS+
Sbjct: 177 EELVAWLEARSDQLDDDSRKRLYTNPLRILDSKNPAISELLQDA-------PTLFEALSV 229

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + +    E+   ++                             +++  +VRGL+YY    
Sbjct: 230 ESKARFEEVQVDLEAL-----------------------QIPFQLNPRLVRGLDYYGHTA 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL- 365
           +E            +     +V GGGRYDGLV +  G   PA G++ G+ RL++ L+S  
Sbjct: 267 FEIT--------SDQLGAQATVCGGGRYDGLVEQLGGAPTPAFGWAFGMERLMLLLESAA 318

Query: 366 ----ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                 S   +       +  ++    +     +    LR AG+  E+   S   F  Q 
Sbjct: 319 SINPNGSAARLTASTRPDLYVVNRGEQAERVALVIAHQLRAAGLVVELD-SSGSAFNKQF 377

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
           K A R     A++ G  E  RG  ++K L 
Sbjct: 378 KRAGRSRATWALVIGDDEAERGEARLKYLQ 407


>gi|57233674|ref|YP_180761.1| histidyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|83305867|sp|Q3ZAI8|SYH_DEHE1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|57224122|gb|AAW39179.1| histidyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 418

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 98/485 (20%), Positives = 183/485 (37%), Gaps = 72/485 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D   ++    + +      I   YG+   +TP+ E +    + + +  D  +
Sbjct: 2   YQSPRGTEDILPEDQPYWHFVRQQAARIAALYGYQRTDTPVFEDAGLFVRSVGEGTDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D  G  ++LR + TAP+ R   E+       P + Y +  +FR ++   GR+R
Sbjct: 62  KEMYTFEDRGGDKLTLRPEGTAPICRAYLEHGMQTRTKPVKLYYLSSIFRYDRPQAGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGLH 185
           Q  Q   + +G +  + DAE+  M       +GI      +  I  R+     +  +  +
Sbjct: 122 QHHQFGFEAIGEADASLDAEVIEMAWRFYNLLGINDLSLELNSIGCRECRPAYISALKAY 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 +        D   +     ++LL  +                +E       +L 
Sbjct: 182 YGQHEGKL-----CSDCKTRLDKNTLRLLDCKREECQC---------VAENAPRSADYLC 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D                     +N L     +V    + + R+      VRGL+YY+  
Sbjct: 228 PDC-----------------LAHYNRLKECLTVVDLPFHENFRL------VRGLDYYSRT 264

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E         + +      ++GGGGRYDGL+ +  G+  PA GF+ GI R+I+ LK  
Sbjct: 265 VFEI--------QPRIEGAQSTIGGGGRYDGLIEQLGGEPTPAIGFATGIERIILNLKRQ 316

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG-SSKNFGNQLKYA 424
             +   +       +        +          LR AGI   ++   + K+   QL+ A
Sbjct: 317 GITPPPLPSPS---VFLAYMGEAASLASIALASDLRKAGIG--IYQTYAQKSIKAQLRQA 371

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           +      A+I G  E  +G   ++++                      Q TIP+ +L+  
Sbjct: 372 NSLGADWAVILGEEELKQGCAVLRNMK------------------EAGQATIPLDQLICE 413

Query: 485 VKKIL 489
           +KK +
Sbjct: 414 IKKQI 418


>gi|152979678|ref|YP_001345307.1| histidyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704494|sp|A6VQX5|SYH_ACTSZ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|150841401|gb|ABR75372.1| histidyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 423

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 103/485 (21%), Positives = 193/485 (39%), Gaps = 68/485 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  DC   +  +   I D +RN+  +YG+  +  P++E +    + + +  D  
Sbjct: 4   IIKAIRGMNDCSPTDSPLWQWIEDKVRNVLASYGYSEVRMPIVESTPLFARAIGEVTDVV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K +++  D + + ++LR + TA   R   EN        R + +GP+FR+E+   GR+R
Sbjct: 64  SKEMYTFWD-NDEQLTLRPEGTAGCVRAAIENGWIYNNEQRLWYMGPMFRHERPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+  G +    DAE+ ++ A   + +GI   + H+ +    I            
Sbjct: 123 QFHQAGVEIFGIANPEIDAELIILTARLWKELGI---EQHVSLQLNSIGSLAARAGYRTA 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                E    L + ++ ++     +++L  +          +           ++ +L  
Sbjct: 180 LVAFLENHQALMSDEEKERLLKNPLRILDTKN---------EALQEVLNDAPKLLDYLDD 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +  +   +L  L+                            + +I+  +VRGL+YY   V
Sbjct: 231 ESRQHFTQLCALLDN-----------------------MGVQYEINPKLVRGLDYYNKTV 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +               G+V GGGRYDGLV +  G      GF++G+ RL++ ++ + 
Sbjct: 268 FEWVTSA--------LGAQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLVLLVQEVN 319

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYA 424
               NI     V I  +     +        + +R+    +R  M   S   F  Q K A
Sbjct: 320 K---NISVPNAVDIYVVFSGEGTTLAAFQTAEKIRSELPHLRV-MTHCSGGKFQKQFKRA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           D+    LA++ G  E     + +KDL+                   V Q TI + EL+  
Sbjct: 376 DKLGAKLALVIGESEVQTDRVVVKDLS-----------------GAVEQQTISVVELIDY 418

Query: 485 VKKIL 489
           +K++ 
Sbjct: 419 LKRVF 423


>gi|294625076|ref|ZP_06703723.1| histidyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294664852|ref|ZP_06730172.1| histidyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292600621|gb|EFF44711.1| histidyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292605374|gb|EFF48705.1| histidyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 524

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 147/511 (28%), Positives = 234/511 (45%), Gaps = 69/511 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 56  IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 115

Query: 66  PNKGVFSLQD----------------DDG-QWISLRYDLTAPLARYVAENFDTIVFPCRT 108
               V+ +Q                 + G   ++LR+DLT PLARYVAE+   + FP R 
Sbjct: 116 ---QVYFVQSTGALANAAAAADEGAENGGLPELALRFDLTVPLARYVAEHEHDLSFPFRR 172

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ + 
Sbjct: 173 YQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQ 232

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           +NNRK+L G  E +G+   +    +L VLR +DK+DK G   V+  L            +
Sbjct: 233 LNNRKLLRGFFESLGVAEGE---LQLAVLREVDKIDKRGADYVRDTL----------VGE 279

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRKS 282
           G  + +EQ+  +++F+++  E     L +L      V  +    +G  EL  + ELV+  
Sbjct: 280 GFGIPAEQVARILAFVAVRSEGHADALAQLQALEGSVGASATLGEGIAELREVLELVKAL 339

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G   +   ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S + 
Sbjct: 340 GVPESAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYESLASHYT 391

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +P  G SIG++RL   L+         +     ++  M  D   L       + LR 
Sbjct: 392 KSKLPGVGISIGLTRLFWQLREAGLIQGIAESSVQAMVALM--DETRLDDALDIARRLRI 449

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            GI  E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL   ++       
Sbjct: 450 GGINTEVQM-EPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ------- 500

Query: 463 NESWREARVAQITIPISELVSTVKKILQENK 493
                     Q  +   EL ST+   L++ K
Sbjct: 501 ----------QFDVARDELASTLLVELEQAK 521


>gi|168215559|ref|ZP_02641184.1| histidyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182382324|gb|EDT79803.1| histidyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 415

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 99/462 (21%), Positives = 171/462 (37%), Gaps = 57/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  +G  D    +    + I + +R I   YG   I TP+ E ++   + + +  D 
Sbjct: 1   MAIQAQKGTKDMLPNDAYKWHYIEEKLRKISAEYGIREIRTPMFEATELFKRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + TAP  R   EN       P + +   P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGGRSITLKPEGTAPAVRAFIENSLYADAQPTKMFYFTPCFRYEKMQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKI 182
            R+F Q  ++  GS   + DAE+  ++   L      +        +   K      E +
Sbjct: 121 LREFHQYGIEVFGSQEASIDAEILSLVMRALTEDFGIKGLSLNINSLGCPKCRAKFNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             +  +  +             K   +   + + + +     +  K A    + I     
Sbjct: 181 KQYLKENYDNLCETC-------KTRFEKNPMRIIDCKEKRCKEIVKEAPSILDYI----- 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                  E+  +    +   +   G       I   IVRGL+YY
Sbjct: 229 ----------------------CEECSDHFSKLKAYLDVMG---IEYNIDPQIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E I                +V GGGRYD LV    G   PA GF +G+ RL++ L
Sbjct: 264 SKTVFEVIKDGL------------TVCGGGRYDYLVEEVDGPKTPAMGFGLGLERLLLIL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I E     +       ++  +       LR AGI+AE+     K+   Q+K
Sbjct: 312 DEEGI---EIPEPVRCEVYIGSMGDNAKLEAMKLAFNLRKAGIKAEIDH-LGKSVKAQMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           YA++       I G  E     ++IK ++ G++    +  NE
Sbjct: 368 YANKIGAKYTFIIGDSEIEENKIKIKRMSDGEQFEISLDINE 409


>gi|324504360|gb|ADY41882.1| Histidyl-tRNA synthetase [Ascaris suum]
          Length = 532

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 122/505 (24%), Positives = 208/505 (41%), Gaps = 48/505 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPD 62
           + K   + P+G  D   K + IR ++L  +   ++ +G + I+TP+ E  D L GK+  +
Sbjct: 57  QGKFVLKCPKGTRDYGPKAMAIREKVLGVVTESFKRHGAETIDTPVFELRDVLMGKYGEE 116

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                K +F L D  G+ +SLRYDLT P ARY+A N  T +                   
Sbjct: 117 G---GKLIFDLADQGGELLSLRYDLTVPFARYLAMNKVTNIKRYHIA-KVYRRDQPVMTR 172

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+R+F QCD D  G          C+ + D + +  ++  D+ I +N+R +L+G+    
Sbjct: 173 GRYREFFQCDFDIAGQYDAMVPEAECLKVIDEVMS-ALELGDFQIKLNHRLMLEGMFSVS 231

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL--GEGRTDNSGDFTKGANLTSEQIDIM 240
           G+   +       V  +IDKLDK     V+  L   +   +   D  +      EQ   +
Sbjct: 232 GVSDLE----FKTVCSSIDKLDKVSWDEVRTELVNEKHINEVVVDKLEKFVRMREQNSSL 287

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +   +D  +S +E         + +K   ++ ++ E          R+     + RGL+
Sbjct: 288 SNSQLLDRFESDNET----GAHSSVKKAIADIRLLLEYCELYDVAK-RVVFDPALARGLD 342

Query: 301 YYTGCVYEAILGFPVMNEKQKPV-----------VFGSVGGGGRYDGLVSRFKGQNV--P 347
           YYTG ++E ++       +                 GSV  GGRYD LV  F  +    P
Sbjct: 343 YYTGTIFETVVKEFSTGYRGGDGRTNDEVDENSTNVGSVAAGGRYDNLVGMFSQKKQSVP 402

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             G S GI RL   ++       +        +       + L +     ++L    I+A
Sbjct: 403 CVGVSFGIERLFSIMEMRAELEKSAVRTTETEVFVASAQKNLLKERMKLCKLLWENNIKA 462

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           EM   ++     QL+Y + R  PL  I G  E   G+++++++   +E            
Sbjct: 463 EMAYKANPKMLTQLQYCEERLIPLVAIVGERELQEGVVKLRNVEDRQE------------ 510

Query: 468 EARVAQITIPISELVSTVKKILQEN 492
                   IP+S LV  ++  L +N
Sbjct: 511 ------QDIPLSRLVEEIRARLAKN 529


>gi|33597411|ref|NP_885054.1| histidyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|33573838|emb|CAE38146.1| histidyl-tRNA synthetase [Bordetella parapertussis]
          Length = 434

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 106/491 (21%), Positives = 193/491 (39%), Gaps = 66/491 (13%)

Query: 1   MGKKTKL--RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M K T++  +    RG  D          +  + +R    +YG+  + TP+LE++    +
Sbjct: 4   MTKMTQVFQKVSAIRGMNDVLPGPSARWEKFEEIVRGWLRSYGYRNVRTPVLEHTRLFAR 63

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K +++  D  +G  +++R ++TA + R   E+      P R Y IGPVFR
Sbjct: 64  GIGEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFR 123

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q DV+ +G +    DAEM +M+A   + +G++     +    +    
Sbjct: 124 HERPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAER 183

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +                 + 
Sbjct: 184 AAHRAALIEHLERHQDILD----EDGRRRMYSNPLRVLDTKNPAMQEMA---------DS 230

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +  FL  +       L + +                              +++  +V
Sbjct: 231 APRLFDFLGEESRSHFDGLCQRLADA-----------------------GIEYRLNPRLV 267

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          +    G+V GGGRYDGLV    G+  PA GF+IG+ 
Sbjct: 268 RGLDYYNLTVFEWVT--------DRLGAQGTVCGGGRYDGLVELLGGKPAPAVGFAIGME 319

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+   +     +  I++     +  +    +         + LR AG+   +  G++  
Sbjct: 320 RLLDLWEQ----SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDAGLDVIVHAGAAG- 374

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           F  Q K AD     +A+I G  E +     IK L                  A  AQ  +
Sbjct: 375 FKAQFKRADASGARIAVILGGDEVASRTASIKHLR-------------GPVGADAAQQQV 421

Query: 477 PISELVSTVKK 487
           P+++L   +K 
Sbjct: 422 PLAQLADVLKS 432


>gi|21228163|ref|NP_634085.1| histidyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|32130120|sp|Q8PVB0|SYH_METMA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|20906611|gb|AAM31757.1| Histidyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 411

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 104/465 (22%), Positives = 179/465 (38%), Gaps = 55/465 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRG  D    +   R  +   +RN+  N+G+  I TP  E+ D       +    
Sbjct: 1   MSVNRPRGTRDFLPADTARRRYVESVMRNVVLNWGYSEIITPTFEHLDLFTLKSGEGIIG 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +++  D  G+ ++LR +LTAP+ R+          P + +     FR E+   GRFR
Sbjct: 61  --ELYNFTDKGGREMTLRPELTAPVMRFYVNELQPFPKPLKLFYFENCFRYERPQKGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +F Q  V+ +GS    +DAE+  + +  L+AVGIK +         R +L G+       
Sbjct: 119 EFWQFGVELIGSGKSDSDAEVIALASALLKAVGIKGDMKLGNLAVIRTLLKGL------- 171

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +      V+R +DK +  GL+ +   +                   +    +   + 
Sbjct: 172 ---EPEIVSNVMRLVDKKEYAGLEALLDEI---------------GAEEQLKSDLFRLIH 213

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +     + E+  +V           ELV   + ++          +   I RGL+YYTG 
Sbjct: 214 LQGRYILPEVKGIVGNIP-------ELVSFEKTLKLLDAYGVDYSLDFGIARGLDYYTGM 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E           +       V GGG Y  L+  F G +VP+TGF IG  R++      
Sbjct: 267 VFEVY--------AEGLGAQKQVCGGGSY-QLIQLFGGGDVPSTGFGIGFDRIMEI---- 313

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +       +  +      L +       LR   +  ++ L   +NF  QL YA+
Sbjct: 314 ----CPLVPPAQKSLVVVSKPDTHL-EAVKVATELRNY-LPVQIDLME-RNFKAQLSYAN 366

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             N    II G  E   G L ++D+  G++    ++        +
Sbjct: 367 TINADYVIIVGEKELEAGKLTLRDMVSGEQELLTLEEIIEKISGQ 411


>gi|212551089|ref|YP_002309406.1| histidyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229558669|sp|B6YS23|SYH_AZOPC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|212549327|dbj|BAG83995.1| histidyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 458

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 143/490 (29%), Positives = 215/490 (43%), Gaps = 61/490 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRP 66
           +  +P+G  D    E+  RN I D+IR+++  YGF  IETP LE     LGK+  + D  
Sbjct: 3   KLSIPKGTRDFTPCEMDKRNYIFDTIRSVFYLYGFKQIETPALENLSTLLGKYGEEND-- 60

Query: 67  NKGVFSL------------QDDDGQWIS----------LRYDLTAPLARYVAENFDTIVF 104
            K +F +             D +   +S          LRYDLT PLAR+V  + + I F
Sbjct: 61  -KLLFKILNSGDFISKVNPIDWNNHQLSKLTKQISKKGLRYDLTLPLARFVVMHRNEITF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + ++I PV+R+++   GR+R+F+QCD D VGS +   + E+  ++ +    + I    
Sbjct: 120 PFKRFQIQPVWRSDRPQKGRYREFVQCDADIVGSDSLLNEVELIQIIDEVFHRLSISI-- 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL+GI E I      +  +   +  A+DKLDK GL  V   L         
Sbjct: 178 -SIKINNRKILNGIAEII-----SEEKKITDITTAMDKLDKVGLTKVNEELL-------- 223

Query: 225 DFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                  ++ + ID +  F  L    +  +  L  ++  +  G KG  E+  I   +   
Sbjct: 224 ----QKGISIQAIDQLQPFFLLKGSNQNKISTLKNILSTSPIGIKGLQEIETIFNKLNLI 279

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
               N IK   T+ RGL YYTG ++E          K   V  GSV GGGRYD L + F 
Sbjct: 280 -PTRNTIKFDLTLARGLNYYTGTIFEV---------KCLNVPIGSVLGGGRYDNLTNIFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
             N+   G S G  R+   L  L    N         I  ++     +         LR 
Sbjct: 330 LSNLSGVGISFGADRIFDILNQLNLYPNTNASHT--QILFVNLGEKGVDFILPVLFSLRK 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            GI AE++  ++K    QL YA     P   I G+ E +   + IKD+    + S  +  
Sbjct: 388 VGINAELYPHNTK-IKKQLSYAHNNQIPFVAIVGSTEIAENKITIKDMRSCSQFSIALDK 446

Query: 463 NESWREARVA 472
             ++ +    
Sbjct: 447 LINFFQYERQ 456


>gi|229592440|ref|YP_002874559.1| histidyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511954|sp|C3K1L3|SYH_PSEFS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229364306|emb|CAY52045.1| Histidyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 429

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 105/479 (21%), Positives = 192/479 (40%), Gaps = 57/479 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRYFESTVARLLDNYGYKQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++ +D +G  ++LR + TA   R V E+  T    P + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLEHGLTGGGQPQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR+RQF Q  ++         DAE+ ++       +GI           R  +   
Sbjct: 117 RPQKGRYRQFHQIGLEVFNLDGPDIDAELIVLTWRLWGVLGI-----------RDAVKLE 165

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL-LGEGRTDNSGDFTKGANLTSEQI 237
           L  +G           +V      LDK      + L     R  ++ +    A L +   
Sbjct: 166 LNSLGTSESRGRYRVALVEYLSAHLDKLDEDSQRRLKTNPLRVLDTKNADTQAVLVN--A 223

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             M  +L  +       L   +                               I+  +VR
Sbjct: 224 PKMADYLDDESRTHFEGLKARLDAA-----------------------GIPYVINPKLVR 260

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY+  V+E +         +K    G+V  GGRYDGLV +  G+     GF++GI R
Sbjct: 261 GLDYYSKTVFEWVT--------EKLGAQGTVCAGGRYDGLVEQMGGKPTTGVGFAMGIER 312

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           LI+ L++LE     I     V +      ++  +      + +R     +R ++  G+  
Sbjct: 313 LILLLETLEQVPEEISRQVDVYLCAFGEAAELAALALS--EKVRDQLPNLRLQINAGAG- 369

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQ 473
           +F +Q K AD+     A+I G  E ++ ++  K L  +G++ +       +     V Q
Sbjct: 370 SFKSQFKKADKSGALYALILGEDELAQQVIGFKPLRGQGEQQNIAFDALAAHLATCVVQ 428


>gi|313888744|ref|ZP_07822408.1| histidine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845302|gb|EFR32699.1| histidine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 435

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 134/460 (29%), Positives = 209/460 (45%), Gaps = 35/460 (7%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +     GF +   K+  + N + D IR  +E +GF PI+TP++E S+ L      E    
Sbjct: 5   KPSTLPGFMELLPKDQILFNEMKDIIRKNFEKHGFLPIDTPVIEKSEVLLAKGGGE--TE 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++         +SLR+DLT PLARY  E+ + + FP + Y+IG V+R EK   GRFR+
Sbjct: 63  KQIYRFS-KGDTDMSLRFDLTVPLARYTVEHMNDLSFPFKRYQIGKVYRGEKAQKGRFRE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD+D +G    +   +    +        +   D+ I +NNRKIL G    +G+   
Sbjct: 122 FYQCDIDTIGMGELSLVNDAEFPVVIFHTFKDLGFTDFTIHLNNRKILKGFFSSLGIEDS 181

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                 + VLR +DKLDK G + V   LGE              +  +  + ++ F+ I 
Sbjct: 182 ------MNVLRTVDKLDKIGEESVLEELGEN------------GIGRDSGEKILEFIKIK 223

Query: 248 L--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              ++ + +L +L       ++G +EL  +   +R  G + +   I   I RGL+YYTG 
Sbjct: 224 GSVDEILEQLRDLKIKDEIFQEGLDELTQVVGYMRDFGIDEDCFDIDLKIARGLDYYTGT 283

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           VYE  L              GSV  GGRY+ L S +  + +P  G SIG+SRL   L   
Sbjct: 284 VYETTL--------DNYPKIGSVCSGGRYEDLASYYTDKTLPGVGISIGLSRLFYQLNEA 335

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +  ++  K +  +LI  MD   D +         LR  G+R  ++   +K    + KYAD
Sbjct: 336 KIISSEEKSLVDLLIIPMD---DCIHDGIKLLSELREKGVRVSVYTEFAK-LKKKFKYAD 391

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +      I+ G  E       +KD+  G +          
Sbjct: 392 QTKVDYVIVLGEEEIKTRKYSLKDMKTGDQEEVTFDELVE 431


>gi|311894853|dbj|BAJ27261.1| putative histidyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 425

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 95/482 (19%), Positives = 182/482 (37%), Gaps = 69/482 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M ++       P+G  D    E      I + +       G+  IETP+ E      + +
Sbjct: 1   MTEEKLSTFTAPKGTYDLLPPESATFLAIRERLSAPARRAGYGYIETPVFEDVKLFSRGV 60

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRN 117
            +  D   K +++L    G  ++LR + TA + R   +             +  G  +R 
Sbjct: 61  GESTDIVTKEMYNLTTKGGDELALRPEGTASVLRAALQANLHKQGNLPVKLWYSGSYYRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGI 169
           E+   GR+RQF Q   + +G+     DAE+ ++  D   ++G            D     
Sbjct: 121 ERAQKGRYRQFAQVGAEAIGAEDPALDAELIILADDAFRSLGLRDYRLLLNSLGDQRCRP 180

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L  + L  + +    +  LR +D       + V+  LG+            
Sbjct: 181 AYRAALVAFLAGLDLDEETRRRAEINPLRVLDDK----RESVQAQLGD------------ 224

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +   L  + +    ++ EL+                              
Sbjct: 225 -------APKLRDHLCEECKAYDAKVRELLTANGVA-----------------------F 254

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                +VRGL+YYT   +E +                ++GGGGRYDGL     G  +P+ 
Sbjct: 255 VDDPKLVRGLDYYTRTTFEFV--------HDGLGAQSAIGGGGRYDGLSEMIGGPALPSV 306

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G+++G+ R  +AL++   +  ++     V +  +  ++ ++   ++    LR AG+  ++
Sbjct: 307 GWALGVDRSYLALEAEGVAL-DLPAATSVYVVALGEEAKNVLFAKVV--ELRRAGVATDL 363

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             G  K+  N +K ADR     A+I G  + + G++Q+KDL  G++    +    +  + 
Sbjct: 364 AFGV-KSIKNAMKSADRSGARFALIAGDRDLAEGVVQLKDLTTGEQTPVALAALVTTLKE 422

Query: 470 RV 471
           + 
Sbjct: 423 KQ 424


>gi|260771395|ref|ZP_05880320.1| histidyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260613521|gb|EEX38715.1| histidyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|315180975|gb|ADT87889.1| histidyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 398

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 101/449 (22%), Positives = 176/449 (39%), Gaps = 69/449 (15%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDDDGQWISLRYDL 87
           +   ++N+   YG++ +  P++E +    + + +  D   K +++ +D +G  ++LR + 
Sbjct: 1   MEGIVKNVISAYGYNEVRMPIVEMTHLFSRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEG 60

Query: 88  TAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM 147
           TA   R   EN        R + +GP+FR+E+   GR+RQF QC V+  G      DAE+
Sbjct: 61  TAGCVRSGIENGLLYNQEQRLWYMGPMFRHERPQKGRYRQFHQCGVEVFGIDGPDVDAEL 120

Query: 148 CMMMADTLEAVG---------IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
            MM A     +G                   N R  L   LE+     D+          
Sbjct: 121 IMMTARLWRELGIADYVRLELNSIGSLEARANYRTALIEYLEQYQDVLDE---------- 170

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
             D   +     +++L  +                      +  +L  + ++    L EL
Sbjct: 171 --DCKRRMYTNPLRVLDTKN---------PDVQAVLGDAPKLSDYLDTESKQHFAGLCEL 219

Query: 259 VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
           +            L                       VRGL+YY   V+E +        
Sbjct: 220 LDAAGIEYTINERL-----------------------VRGLDYYNRTVFEWMT------- 249

Query: 319 KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV 378
                  G+V GGGRYDGLV +  G+  PA GF++G+ RL++ +++L ++         V
Sbjct: 250 -DSLGAQGTVCGGGRYDGLVEQLGGKATPAVGFAMGLERLVLMMETLGNTDVRR----NV 304

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            +  +     +L+      + LR    G+R     G   NF  Q K AD+    +A++ G
Sbjct: 305 DVYMVTAGEGTLTAGMKLAEQLREQIPGLRVMTHFGGG-NFKKQFKRADKVGAAVALVLG 363

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNES 465
             E +   + +KDLA G++ +       S
Sbjct: 364 ENEVAEHTVVLKDLAGGEQETISQTEVAS 392


>gi|28868642|ref|NP_791261.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|32130096|sp|Q886Y9|SYH_PSESM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|28851880|gb|AAO54956.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 429

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 101/485 (20%), Positives = 183/485 (37%), Gaps = 69/485 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E++D   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPVVEFTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +            
Sbjct: 177 RYRDALVEFLSAHLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRIHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ L++LE     I     V +      ++  +         R   +R ++
Sbjct: 305 GFAMGIERLVLLLETLEQVPEEIARQVDVYLCAFGEAAELAALALTEQVRDRLPNLRLQV 364

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWRE 468
             G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +           
Sbjct: 365 NAGAG-SFKSQFKKADKSGALYALILGEEELAAKIIGVKPLRGQGEQQNIAWDALSEHLA 423

Query: 469 ARVAQ 473
           + V Q
Sbjct: 424 SCVVQ 428


>gi|294938788|ref|XP_002782199.1| histidyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239893697|gb|EER13994.1| histidyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 491

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 111/492 (22%), Positives = 194/492 (39%), Gaps = 51/492 (10%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           +  +  + P G  D   +++R+RN +    R +   YGF   + P+LE  D   +   +E
Sbjct: 50  ENVISFDPPSGTRDFFPEDMRVRNWLFSQWRAVSTQYGFSEYDAPVLENEDLYKRKAGEE 109

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
               + +++  D +   ++LR ++T  LAR V       V P + + I   +R E    G
Sbjct: 110 IV--EQMYNFIDKEDHHVTLRPEMTPTLARMVLSRVRMSVLPLKWFSIPQCWRFETTQRG 167

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R R+  Q + D VG S  TA+ E+   M    + VG+   D  I +N+R IL  +L+  G
Sbjct: 168 RKREHYQWNCDIVGISDITAELELLATMVGFFKRVGLTSADVGIKVNSRAILQSVLKASG 227

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  D+       V   +DK+DK G + V   + E              L +   + +V  
Sbjct: 228 VGADE----FAKVCVVVDKIDKVGREEVVRQMVE-----------DIGLDTAVAERVVDA 272

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            +    +    +        +  +   ++  + E  +  G   + +   +++VRGL YYT
Sbjct: 273 TAAGSIEEFKSIAG-----ESCTEDVADVERLFEFAKNYGI-DDWLVFDASVVRGLAYYT 326

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVAL 362
           G V+EA           +     ++ GGGRYD L+S +     +P  GF  G   +   L
Sbjct: 327 GIVWEAF---------DRKGELRAIAGGGRYDRLLSLYGAPSEIPCVGFGFGDCVIYELL 377

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       +       +        +       LR++G   ++ L + K    Q +
Sbjct: 378 LERGLLPEIPHRVD----FVVAAYKGMYGQALEVAAGLRSSGATVDVMLEAGKRVDKQFR 433

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           YADR            E   G ++IKDL  G                   QI IP+++L 
Sbjct: 434 YADRVGADKIAFVAPSEWEAGKVRIKDLRTGD-------------SEARVQIDIPVADLA 480

Query: 483 STVKKILQENKE 494
           +  K   ++  E
Sbjct: 481 NA-KSYFEKQAE 491


>gi|51244423|ref|YP_064307.1| histidyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81692950|sp|Q6AQS3|SYH_DESPS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|50875460|emb|CAG35300.1| probable histidyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 429

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 94/457 (20%), Positives = 179/457 (39%), Gaps = 56/457 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           L+ ++ +GF D    E+ +  ++    R+I+  + F  I  P+LE +D   + + +  D 
Sbjct: 12  LKIKVLKGFKDILPGEVELWQQVEKITRDIFTRHNFSEIRMPILEQTDLFARSIGEATDI 71

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGR 124
             K +++  D     +++R + TA L R   EN   +  P  R + IGP+FR+E+   GR
Sbjct: 72  VEKEMYTFVDKK---VTMRPEATASLIRAYIENGLYVAKPVQRLFTIGPMFRHERPQKGR 128

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q D++ +GS     DAE+  M +     +GI        +   +      + +  
Sbjct: 129 LRQFHQMDIEVLGSVNPLVDAELMAMGSMVFRTLGINVRLEMNSLGCPECRPVYRQALVE 188

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +D+           D   +     +++L  +           G     E+   ++ +L
Sbjct: 189 FIEDRFEHL-----CDDCKRRSKTNPLRVLDCKN---------AGCRAQVEEAPSILDYL 234

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D       +   ++                              ++  +VRGL+YY  
Sbjct: 235 CGDCADHFDTVCTTLESLE-----------------------IPYSLNKFMVRGLDYYCR 271

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVALK 363
             +E I                +VG GGRYDGLV +      +P  GF+IG+ RLI+ L+
Sbjct: 272 TTFEFIT--------DDLGAQSAVGAGGRYDGLVEKLGGPVGMPGIGFAIGMERLILLLQ 323

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E+     K    + +  +     +     + +Q LR  G+   +     ++   Q+K 
Sbjct: 324 QKETEFVAEK----LDLFVIGLGDAATKLACILSQDLRGLGVGVAVDY-EGRSLKAQMKL 378

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           A++      +I G  E   G   +K++   ++    +
Sbjct: 379 ANKAGVAATLILGENEIETGKAVLKNMDSQEQCEVAL 415


>gi|29833386|ref|NP_828020.1| histidyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|39932146|sp|Q827T0|SYH_STRAW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|29610509|dbj|BAC74555.1| putative histidyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 420

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 94/474 (19%), Positives = 175/474 (36%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I     N G+  IETP  E  +   + + +  D  
Sbjct: 3   TFKAPKGTYDLIPPDSAKYLAVREAIAAPLRNSGYGYIETPGFENVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++ +   G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYAFETKGGDRLALRPEGTASVLRAALEANLHKAGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++   +  ++G++          D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQSYRSLGLRNFRILLNSLGDKECRPVYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  D      +  LR +D       + V+  LG                    
Sbjct: 183 DFLRGLDLDEDTLRRAEINPLRVLDDK----REDVQKQLG-------------------G 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+ EL+       +   +L                       V
Sbjct: 220 APLLRDYLCDACKAYHEEVRELITAAGVSFEDDAKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++               +  +    ++          LR  GI A+   G  K 
Sbjct: 309 RTVLALEAEGVELELPSSTS---VFAVPLGEEARRILFAKVTELRKVGIAADFAYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R      ++ G  + + G++Q+KD+  G++ +  +    +  EAR
Sbjct: 365 LKGAMKNANRSGARYTVVAGERDLAEGVVQLKDMESGEQTAVGVNEIVAELEAR 418


>gi|319947810|ref|ZP_08022004.1| histidyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438534|gb|EFV93460.1| histidyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 426

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 97/468 (20%), Positives = 173/468 (36%), Gaps = 68/468 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD- 62
           + K   + P+G  D           + D+I       G+  IE P+ E +    + + + 
Sbjct: 5   EKKTALKAPKGVPDYVPPASAGFVAVRDAITTAARRAGYGHIELPIFEDTALFARGVGES 64

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
            D  +K ++S +D  G+ ++LR + TA + R V E+       P +    GP FR E+  
Sbjct: 65  TDVVSKEMYSFEDRGGRSVTLRPEGTAGVMRAVIEHGLDRGQLPVKLCYAGPFFRYERPQ 124

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRK 173
            GR+RQ  Q  ++ +G      DAE+  +  +   ++G            D       R+
Sbjct: 125 AGRYRQLQQVGIEAIGVDDPALDAEVIAVADEAFRSLGLTGFRLELTSLGDETCRPQYRE 184

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L   L  + L    +   R+  LR +D         V+  L                  
Sbjct: 185 RLQSFLAGLDLDEATRERARINPLRVLDDKRP----EVRAQL------------------ 222

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            E   +M+  LS    +    +   +                               ++ 
Sbjct: 223 -EDAPLMIDHLSDASAEHFATVRAHLDAL-----------------------GVPYTVNP 258

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YYT   +E +                 +GGGGRYDGL+ +  GQ +   GF I
Sbjct: 259 RMVRGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMEQLGGQALSGIGFGI 310

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+ R ++AL++           G V +  +   + + +         R  G+RA+M  G 
Sbjct: 311 GVDRTVLALQAEGLDP---AAQGRVDVYGVALGAAAKAAMVPVLAEFRRNGLRADMAYG- 366

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +      K ADR    + ++ G  E   G   +K ++ G++    ++
Sbjct: 367 DRGMKGAFKAADRSGAAVTVVIGENELETGTAVVKTMSTGEQEPVPLE 414


>gi|330872878|gb|EGH07027.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 429

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 101/487 (20%), Positives = 185/487 (37%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E++D   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +            
Sbjct: 177 RYRDALVEFLSAHLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRIHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++GI RL++ L++LE     I     V +      ++  +      + +R     +R 
Sbjct: 305 GFAMGIERLVLLLETLEQVPEEIGRQVDVYLCAFGEAAELAALALT--EQVRDQLPNLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALYALILGEEELAAKIIGVKPLRGQGEQQNIAWDALSEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|302517981|ref|ZP_07270323.1| histidyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|318057092|ref|ZP_07975815.1| histidyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|302426876|gb|EFK98691.1| histidyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 420

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 96/493 (19%), Positives = 181/493 (36%), Gaps = 87/493 (17%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I     + G+  IETP  E      + + +  D  
Sbjct: 3   TFKAPKGTYDLLPPDSGRFLAVREAIAAPLRDAGYGYIETPGFEDVRLFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGR 124
           +K ++      G  ++LR + TA + R V E+            +  G  +R E+   GR
Sbjct: 63  SKEMYVFTTKGGDELALRPEGTAAVLRAVLESNLHKTGNLPVKVWYSGSQYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G+ R         D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPLLDAELIILADQAYRSLGLTRHRILLNSLGDATCRPVYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  + +    +  LR +D         V+  L                     
Sbjct: 183 DFLRALDLDEETRRRVEINPLRVLDDKRP----EVRDQLT-------------------G 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+  L+ G                          R +    +V
Sbjct: 220 APLLADYLCDACKAYHEEVRALLDGA-----------------------GVRYEDDPKLV 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMLGGPELPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     +         +  +     +          LR AGI  ++  G  + 
Sbjct: 309 RTVLALEAEGVVLDLPP---VTSVYAIPLGEAARRALFEKVTELRRAGIATDLSFG-GRG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
               +K A+R    LA+I G  +   G +Q+KDL  G++ +                  +
Sbjct: 365 LKGAMKSANRSGARLALIAGERDLVDGSVQLKDLESGEQHA------------------V 406

Query: 477 PISELVSTVKKIL 489
           P+++ V+ ++++L
Sbjct: 407 PLAQAVAEIQRLL 419


>gi|269119758|ref|YP_003307935.1| histidyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613636|gb|ACZ08004.1| histidyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 414

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 97/459 (21%), Positives = 183/459 (39%), Gaps = 54/459 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            ++ +G  D   ++IR  + I+DS +N++  YGF+ I TP++E ++   + +  + D  +
Sbjct: 2   IKVLKGMKDRYFEDIRKYDYIIDSAKNVFSKYGFEKIITPIVEETELFERGVGEETDVVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +++  D  G+ I++R + TA + R   +       P  + +  GP++R E    GR+R
Sbjct: 62  KEMYTFLDKAGRSITMRPEGTAGVVRAYLQAGLYKSDPLVKWFYYGPMYRYEAPQKGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+  G     ADAE+  M  + LE  GIK     I             +     
Sbjct: 122 EFHQVGVEAFGVRDPFADAEIIKMGCEFLETAGIKNLTVEINSLGNSSSR----QRYTAE 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K  E  +     +   ++    +++L  + +++   +  K A +  + +D        
Sbjct: 178 LKKFIEERLDKLCDNCKTRYKKNPLRVL--DCKSEACQEQYKNAPVLKDYLD-------- 227

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                                 + EL    EL+            +  +VRGL+YY+  V
Sbjct: 228 ----------------EESSTYYEELKKYLELLE------VNYVENYRLVRGLDYYSDTV 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E         + +      +V  GGRYD L+       +P  GF+ G  R+ + +    
Sbjct: 266 FEI--------KSENLGAQSTVLAGGRYDKLLEILGDIQMPGIGFAAGTERIALLMDESL 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                      V +       +         ++LR  GI+ +   G  K+F +Q+K A +
Sbjct: 318 LKEEEKP----VYVVYFPETKE---YALNIIKILRENGIKVDFDYGM-KSFKSQMKKAGK 369

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            N    II G  E++     +K+   G++   EI+    
Sbjct: 370 LNSKYVIILGEDEKNENKAVLKNFDTGEQEKLEIEKVIE 408


>gi|270307457|ref|YP_003329515.1| histidyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153349|gb|ACZ61187.1| histidyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 418

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 97/485 (20%), Positives = 185/485 (38%), Gaps = 72/485 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D   ++    + +      I   YG+   +TP+ E +    + + +  D  +
Sbjct: 2   YQSPRGTEDILPEDQPYWHFVRQQAARIAALYGYQQTDTPVFEDAGLFVRSVGEGTDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D  G  ++LR + TAP+ R   E+       P + Y +  +FR ++   GR+R
Sbjct: 62  KEMYTFEDRGGDKLTLRPEGTAPICRAYLEHGMQTRTKPVKLYYLSSIFRYDRPQAGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGLH 185
           Q  Q   + +G +  + DAE+  M       +GI      +  I  R+     +  +  +
Sbjct: 122 QHHQFGFEAIGEADASLDAEVIEMAWRLYNLLGINDLSLELNSIGCRECRPAYISALKAY 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 +        D   +     ++LL  +                +E       +L 
Sbjct: 182 YGQHEGKL-----CSDCKTRLDKNTLRLLDCKREECQC---------VAENAPRSTDYLC 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +D                     +N L     ++    + + R+      VRGL+YY+  
Sbjct: 228 LDC-----------------LAHYNRLKECLTVMDLPFHENFRL------VRGLDYYSRT 264

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E         +        ++GGGGRYDGL+ +  G++ PA GF+ GI R+I+ LK  
Sbjct: 265 VFEI--------QPSIEGAQSTIGGGGRYDGLIEQLGGESTPAIGFATGIERIILNLKRQ 316

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG-SSKNFGNQLKYA 424
             +  ++       +        +          LR AGI   ++   + K+   QL+ A
Sbjct: 317 GITPPSLPSPS---VFLAYMGEAASLASVALASDLRKAGIG--IYQTYAQKSIKAQLRQA 371

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           +      A+I G  E  +G   ++++                      Q TIP+ +L+  
Sbjct: 372 NSLGADWAVILGEEELKQGCAVLRNMK------------------EAGQATIPLDQLICE 413

Query: 485 VKKIL 489
           +KK +
Sbjct: 414 IKKQI 418


>gi|239978421|ref|ZP_04700945.1| histidyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291450317|ref|ZP_06589707.1| histidyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291353266|gb|EFE80168.1| histidyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 420

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 89/476 (18%), Positives = 174/476 (36%), Gaps = 69/476 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I     N G+  IETP  E      + + +  D  
Sbjct: 3   TFKAPKGTYDLLPPDSATYLAVREAISAPLRNSGYGYIETPGFEDVALFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++ +   G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYAFETKGGDQLALRPEGTASVLRAALEASLHKAGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G++          D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLREFRILLNSLGDQECRPVYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  + +    +  LR +D         V+  L +                   
Sbjct: 183 EFLRGLDLDEETRRRIDINPLRVLDDK----RADVQKQLTD------------------- 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+  L+       +    L                       V
Sbjct: 220 APVLRDYLCDACKAYHEEVRALISAAGVVFEDDERL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     +         +  +    ++          LR  G+ A+   G  K 
Sbjct: 309 RTVLALRAEGVELDLPSPTS---VFAVPLGEEARRALFGVVTRLRQDGVAADFAYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +K A+R      ++ G  + + G++Q+K++  G++ +  + +  +   AR+A
Sbjct: 365 LKAAMKAANRSGARYTLVAGERDLAEGVVQLKEMESGEQTAVPLDSVVAEVAARLA 420


>gi|298486024|ref|ZP_07004098.1| Histidyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298159501|gb|EFI00548.1| Histidyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330869576|gb|EGH04285.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330985015|gb|EGH83118.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 429

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 100/487 (20%), Positives = 185/487 (37%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +            
Sbjct: 177 RYRDALVEFLSARLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRVHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTTGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRA 407
           GF++GI RL++ L++L      I     V +       +  +L+  +     L +  +R 
Sbjct: 305 GFAMGIERLVLLLETLGQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDQLPS--LRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|110798964|ref|YP_696613.1| histidyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|123049701|sp|Q0TP27|SYH_CLOP1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|110673611|gb|ABG82598.1| histidyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 415

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 98/462 (21%), Positives = 171/462 (37%), Gaps = 57/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  +G  D    +    + I + +R I   YG   I TP+ E ++   + + +  D 
Sbjct: 1   MAIQAQKGTKDMLPNDAYKWHYIEEKLRKISAEYGIREIRTPMFEATELFKRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + TAP  R   EN       P + +   P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGGRSITLKPEGTAPAVRAFIENSLYADAQPTKMFYFTPCFRYEKMQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKI 182
            R+F Q  ++  GS   + DAE+  ++   L      +        +   K      E +
Sbjct: 121 LREFHQYGIEVFGSQEASIDAEILSLVMRALTEDFGIKGLSLNINSLGCPKCRAKFNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             +  +  +             K   +   + + + +     +  K A    + I     
Sbjct: 181 KQYLKENYDNLCETC-------KTRFEKNPMRIIDCKEKRCKEIVKEAPSILDYI----- 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                  E+  +    +   +   G       I   IVRGL+YY
Sbjct: 229 ----------------------CEECSDHFSKLKAYLDVMG---IEYNIDPQIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E I                +V GGGRYD LV    G   PA GF +G+ RL++ L
Sbjct: 264 SKTVFEVIKDGL------------TVCGGGRYDYLVEEVDGPKTPAMGFGLGLERLLLIL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I E     +       ++  +       LR AGI+AE+     K+   Q+K
Sbjct: 312 DEEGI---EIPEPVRCEVYIGSMGDNAKLEAMKLAFNLRKAGIKAEIDH-LGKSVKAQMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           YA++       + G  E     ++IK ++ G++    +  NE
Sbjct: 368 YANKIGAKYTFVIGDSEIEENKIKIKRMSDGEQFEVSLDINE 409


>gi|330965916|gb|EGH66176.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 429

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 101/487 (20%), Positives = 185/487 (37%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E++D   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +            
Sbjct: 177 RYRDALVEFLSAHLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRIHFEALKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQKGGKPTAGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++GI RL++ L++LE     I     V +      ++  +      + +R     +R 
Sbjct: 305 GFAMGIERLVLLLETLEQVPEEIGRQVDVYLCAFGEAAELAALALT--EQVRDQLPNLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALYALILGEEELAAKIIGVKPLRGQGEQQNIAWDALSEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|312962904|ref|ZP_07777391.1| Histidyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282931|gb|EFQ61525.1| Histidyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 429

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 105/479 (21%), Positives = 191/479 (39%), Gaps = 57/479 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +   +  ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRYVEGTVARLLDNYGYKQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++ +D +G  ++LR + TA   R V E+  T    P + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLEHGLTGGGQPQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR+RQF Q  ++         DAE+ ++       +GI           R  +   
Sbjct: 117 RPQKGRYRQFHQIGLEVFNLDGPDIDAELIVLTWRLWGMLGI-----------RDAVKLE 165

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL-LGEGRTDNSGDFTKGANLTSEQI 237
           L  +G           +V     +LD       + L     R  ++ +    A L     
Sbjct: 166 LNSLGTSESRARYREALVEFLSARLDMLDEDSQRRLKTNPLRVLDTKNADTQAALVD--A 223

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             M  +L  +       L   +                               I+  +VR
Sbjct: 224 PKMADYLDDESRTHFEGLKARLDAA-----------------------GIPYVINPKLVR 260

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY+  V+E +          K    G+V  GGRYDGLV +  G+     GF++GI R
Sbjct: 261 GLDYYSKTVFEWVT--------DKLGAQGTVCAGGRYDGLVEQMGGKPTTGVGFAMGIER 312

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           LI+ L++LE     I     V +      ++  +      + +R     +R ++  G+  
Sbjct: 313 LILLLETLEQVPEEIARQVDVYLCAFGEAAELAALALS--EKVRDQLPNLRLQINAGAG- 369

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQ 473
           +F +Q K AD+     A+I G  E +R ++  K L  +G++ +       +     V Q
Sbjct: 370 SFKSQFKKADKSGALYALILGDDELARQVIGFKPLRGQGEQQNIAFDALAAHLATCVVQ 428


>gi|33593202|ref|NP_880846.1| histidyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33563577|emb|CAE42476.1| histidyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332382613|gb|AEE67460.1| histidyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 434

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 106/491 (21%), Positives = 192/491 (39%), Gaps = 66/491 (13%)

Query: 1   MGKKTKL--RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M K T++  +    RG  D          +  + +R    +YG+  + TP+LE++    +
Sbjct: 4   MTKMTQVFQKVSAIRGMNDVLPGPSARWEKFEEIVRGWLRSYGYRNVRTPVLEHTRLFAR 63

Query: 59  FLPD-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + +  D   K +++  D  +G  +++R ++TA + R   E+      P R Y IGPVFR
Sbjct: 64  GIGEVTDIVEKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFR 123

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q DV+ +G +    DAEM +M+A   + +G++     +    +    
Sbjct: 124 HERPQRGRYRQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAER 183

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                  +   ++  + L      D   +     +++L  +                 + 
Sbjct: 184 AAHRAALIEHLERHQDVLD----EDGRRRMYSNPLRVLDTKNPAMQEMA---------DS 230

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +  FL          L + +                              +++  +V
Sbjct: 231 APRLFDFLGEASRSHFDGLCQRLADA-----------------------GIEYRLNPRLV 267

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +          +    G+V GGGRYDGLV    G+  PA GF+IG+ 
Sbjct: 268 RGLDYYNLTVFEWVT--------DRLGAQGTVCGGGRYDGLVELLGGKPTPAVGFAIGME 319

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+   +     +  I++     +  +    +         + LR AG+   +  G++  
Sbjct: 320 RLLDLWEQ----SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDAGLDVIVHAGAAG- 374

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           F  Q K AD     +A+I G  E +     IK L                  A  AQ  +
Sbjct: 375 FKAQFKRADASGARIAVILGGDEVASRTASIKHLR-------------GPVGADAAQQQV 421

Query: 477 PISELVSTVKK 487
           P+++L   +K 
Sbjct: 422 PLAQLADVLKS 432


>gi|71735921|ref|YP_273579.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|83305874|sp|Q48LZ3|SYH_PSE14 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71556474|gb|AAZ35685.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|330874709|gb|EGH08858.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 429

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 100/487 (20%), Positives = 185/487 (37%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +            
Sbjct: 177 RYRDALVEFLSARLDQLDE------------DNQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRVHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTTGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRA 407
           GF++GI RL++ L++L      I     V +       +  +L+  +     L +  +R 
Sbjct: 305 GFAMGIERLVLLLETLGQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDQLPS--LRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|329912294|ref|ZP_08275724.1| Histidyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327545656|gb|EGF30811.1| Histidyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 464

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 95/482 (19%), Positives = 181/482 (37%), Gaps = 63/482 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    +  +     ++++ + ++YGF  I TP++E +    + L    D  
Sbjct: 19  KITAVKGMNDILPADAGLWELFDNTVQTVLKSYGFQQIRTPIVESTSLFARGLGTVTDIV 78

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G  ++LR + TA + R   E+  T   P R +  GP+FR+E+   GR+
Sbjct: 79  EKEMYSFADSMNGDLLTLRPEATAGVVRAAIEHNLTYEGPKRLWYTGPMFRHERPQRGRY 138

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +G S    DAE+ M+     + +G+              +   L  IG  
Sbjct: 139 RQFHQVGAEALGFSGPDIDAELMMLCQRLWDDLGL------------DNIRLELNSIGNA 186

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +   +   ++      L+    +  + L                         ++++L 
Sbjct: 187 EERNSHRIDLIAYFEQHLEVMDEEAKRRLHTNPLR-ILDTKNPAMQAMVNAAPQLLAYLG 245

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + +     +  +++                       +N+    I+  +VRG++YY   
Sbjct: 246 EESQAHFDGVQNILR-----------------------HNNVPFTINPRLVRGMDYYNRT 282

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G+V  GGRYD L   F G+  P+ GF++GI RL+  +K+ 
Sbjct: 283 VFEWVT--------DELGSQGTVCAGGRYDTLFDMFGGKPTPSCGFAMGIERLLELMKAG 334

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL--GSSKNFGNQLKY 423
                         +  +     +  K  +  + LR AG+   +     SS +   Q+K 
Sbjct: 335 G----EKYAGSQCDVYVVHQGDAAQLKASVVAERLRDAGLDVVLHCASASSSSVKAQMKR 390

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           AD      A+I G  E +  M  +K L                   +  Q  +P   +  
Sbjct: 391 ADASGAAFAVILGEDEVAGDMATVKALR-----------ATDGETHQHQQALVPFDSVAD 439

Query: 484 TV 485
            +
Sbjct: 440 YL 441


>gi|282899366|ref|ZP_06307334.1| Histidyl-tRNA synthetase, class IIa [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195733|gb|EFA70662.1| Histidyl-tRNA synthetase, class IIa [Cylindrospermopsis raciborskii
           CS-505]
          Length = 469

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 148/510 (29%), Positives = 232/510 (45%), Gaps = 68/510 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +  K+    P GF +    E R+   +LD+IR ++E+YGF PIETP +E  + L    
Sbjct: 1   MTRNEKINFATPSGFPEFLPGEKRLELYLLDTIRKVFESYGFTPIETPAVERLEVLQAKG 60

Query: 61  PDEDRPNKGVFSLQ-----------DDDGQW----ISLRYDLTAPLARYVAENFDTIVFP 105
              D     ++ ++           D  G+      +L++D T PLA Y+A + + + FP
Sbjct: 61  NQGDNI---IYGIEPILPPNRQLERDKSGETGAEARALKFDQTVPLAAYIARHLNELTFP 117

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
              Y++  VFR E+   GRFRQF QCD+D VG    +   +  M    T     I   D+
Sbjct: 118 FARYQMDMVFRGERAKDGRFRQFRQCDIDVVGRDKLSLLYDAQMPAIITEIFAAINIGDF 177

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I INNRKIL G  + +G+  +    +    +  ID L+K G   V+  L +        
Sbjct: 178 VIRINNRKILSGFFQSLGIAQE----QIKTCIGIIDNLEKIGEAQVQQELEKS------- 226

Query: 226 FTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKGTIAGEKGFN----ELVVISELVR 280
                 ++ EQ   ++ F++ID     + +  + +   +   +GFN    EL  + + V+
Sbjct: 227 -----GISLEQSRKIIEFINIDGNVDDVLDKLKHLAVNLPQAEGFNLGVSELEAVIDGVK 281

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
             G  + R  I  +I RGL YYTG VYE  L              GS+  GGRY+ LV  
Sbjct: 282 NLGVPAQRFCIDLSIARGLNYYTGTVYETTLIG--------HESLGSICSGGRYEELVGI 333

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           F G+ +P  G SIG+SRLI  L  L++         P  +  ++   D +  Y   +Q L
Sbjct: 334 FLGEKMPGVGISIGLSRLINRL--LKADILQKLSPTPAQVMVVNIQEDLMPIYLQVSQQL 391

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R AGI         K  G Q + AD++     +I G+ E +     +KDL+ G+++    
Sbjct: 392 RRAGINVVTNF-EKKQLGKQFQLADKQGIRFCVIIGSQEAANAKSCLKDLSTGEQI---- 446

Query: 461 KNNESWREARVAQITIPISELVSTVKKILQ 490
                          +P S L +T+++ILQ
Sbjct: 447 --------------EVPFSNLATTLQQILQ 462


>gi|254431552|ref|ZP_05045255.1| histidyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626005|gb|EDY38564.1| histidyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 421

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 87/448 (19%), Positives = 174/448 (38%), Gaps = 56/448 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D   +   +   +  +    +       I TPLLE ++   + + +  D   
Sbjct: 4   LQSLRGMVDLLPEHTPLWQHVEATAAAHFRRAAIREIRTPLLEVTELFARGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++  D   +  +LR + TA + R   ++      P R +  GP+FR E+   GR RQ
Sbjct: 64  KEMYTFLDRGERSCTLRPEGTASVVRAAIQHGLLSQGPQRLWYGGPMFRYERPQAGRQRQ 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGI----KRNDYHIGINNRKILDGILEKIG 183
           F Q  ++ +G +   +D E   +  D L  +G+       +     ++R      L    
Sbjct: 124 FHQIGLELLGFADPRSDVEAIAIAWDLLADLGVGGLALELNTLGSPDDRARYRAELVAWL 183

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D+L+         D   +     +++L  +     + +  +GA   ++ +      
Sbjct: 184 EAHRDQLDA--------DSQQRISTNPLRVLDSKH--PATQELLEGAPSLADALS----- 228

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                                  +       + + +   G       ++  +VRGL+YY+
Sbjct: 229 ----------------------GESHERFSQVRQGLEALGIP---FTLNPRLVRGLDYYS 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E            +     +V GGGRYDGLV +  G   PA G+++G+ RL++ L+
Sbjct: 264 HTAFEIT--------SSQLGAQATVCGGGRYDGLVQQLGGAPTPAIGWAMGMERLVLLLQ 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
               + +       + + +    +++L       ++ R AG+  E+   S   F  Q + 
Sbjct: 316 RSAEAASASVAPPDLYVVSRGVQAEAL--ALPLARLCRQAGLVVEIDP-SGAAFSKQFRR 372

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLA 451
           ADR   P A + G  E + G++ +++L 
Sbjct: 373 ADRSGAPHAAVIGDEEAAAGVVILRELR 400


>gi|194333206|ref|YP_002015066.1| histidyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|229558703|sp|B4S4H1|SYH_PROA2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|194311024|gb|ACF45419.1| histidyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 422

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 105/461 (22%), Positives = 176/461 (38%), Gaps = 59/461 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
               +G  D    E+     +   I  +   Y F  I TP+ EY+D   + +    D   
Sbjct: 4   YRAVKGTRDIFPDEVAAWQYVESVIHRVASFYAFHEIRTPVFEYTDLFQRSIGATTDIVG 63

Query: 68  KGVFSLQ-DDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +F+ Q D +G+ I+LR ++TA + R   + N  +     + Y I  +FR E+   GR 
Sbjct: 64  KEMFTFQPDPNGRSITLRPEMTAGVMRAFLQGNRASESPVHKLYYISNLFRKERPQAGRQ 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILEK 181
           RQF Q   + +G+S+  A AE+  MM      +G+K      +    I +RK     L +
Sbjct: 124 RQFCQFGAELLGASSPAAVAEVIAMMMHVFRLLGLKGLKLRINTLGSIEDRKRYRDALRE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             L    +L          D      L+   L + + +         GA         + 
Sbjct: 184 YLLPFSGEL----------DAASLERLEKNPLRILDSKNPAVQSIVSGA-------PSLR 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L                          E   +   +   G           +VRGL+Y
Sbjct: 227 DYLQP--------------------AAVEEFEEVLGYLDDRG---IEYVQDPLLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIV 360
           Y    +E                  ++GGGGRYDGL      G ++PA GF++G+ RL++
Sbjct: 264 YCHTAFEVQCSD--------LGAQDALGGGGRYDGLARELGAGADLPAVGFAVGMERLMI 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+     +    +   V +     D   L         LR A I  E+ L + ++   Q
Sbjct: 316 ALERQGLLSTIPPKGPDVYVVL--QDRAFLVHAVALCGALRDAAISTEIDL-AGRSMKAQ 372

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ A+R     A+  G  E + G+  +K+L    + SR ++
Sbjct: 373 MREANRIKAAYALFVGPDEVASGVYGLKNLESSSQESRSLE 413


>gi|297155794|gb|ADI05506.1| histidyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 420

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 96/474 (20%), Positives = 176/474 (37%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + PRG  D    +      + D+I    +  G+  +ETP  E  +   + + +  D  
Sbjct: 3   TFKAPRGTYDLIPPDSATYLAVRDAIAAPLKRSGYGYVETPGFENVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++L    G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYTLTTKGGDQLALRPEGTASVLRAALEANLHKAGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++  D   ++G++          D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILAHDAYRSLGLRNFRILLNSLGDATCRPAYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  D +    +  LR +D       + V+  L                     
Sbjct: 183 DFLRGLELDDDTRRRIDINPLRVLDDK----REAVQKQLV-------------------G 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++   L    ++   ++ EL+       +   +L                       V
Sbjct: 220 APMLGDHLCEACKEYHEQVRELLTAEGVAFEDDPKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     +         +  +    ++          LR AG+  +   G  K 
Sbjct: 309 RTVLALEAEGVELDLPSATS---VFAVPLGEEARRVLFGAVTGLRRAGVATDFAYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R    LA+I G  + + G++Q+KDL  G++ +  +        AR
Sbjct: 365 VKAAMKAANRSGARLAVIAGERDLAEGVVQLKDLESGEQTAVPLDGLVEAVSAR 418


>gi|257466068|ref|ZP_05630379.1| histidyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917224|ref|ZP_07913464.1| histidyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691099|gb|EFS27934.1| histidyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 413

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 92/464 (19%), Positives = 181/464 (39%), Gaps = 66/464 (14%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   ++    N I +  + ++E+YG   I+TP+ E +D   + + +  D
Sbjct: 1   MKLIKAVRGTKDIIGEDALKYNYISEIAKQVFESYGCQFIKTPIFEETDLFKRGIGEATD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
              K +++ +D   + I+LR + TA + R   EN         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGDRSITLRPENTASVVRSYLENAIYAKEDVSRFYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN----NRKILDGIL 179
           R R+F Q  V+ +G  +   DAE+  M    L+ +GI   +  I       +R      L
Sbjct: 121 RQREFNQIGVEILGEKSPILDAEIIAMGYKLLQKLGITDLEVRINCIGSNASRTEYRKKL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +      + L          D  ++     +++L  +   D             +    
Sbjct: 181 LEYFTPMKEDL--------CEDCKNRLERNPLRVLDCKVDHDKM-----------DGAPS 221

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++  L  +       + + +                                   +VRGL
Sbjct: 222 IIDSLFEEERAHYEAVKKYLT-----------------------IFGVPFVEDPGLVRGL 258

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY+  V+E +          K    G+V GGGRYD L+ +   +++ A GF+ G+ R++
Sbjct: 259 DYYSSTVFEIVTN--------KLGSQGTVLGGGRYDNLLKQLGDKDIAAFGFASGVERIM 310

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L+                +       ++L K    T +LR   ++  +   +SK   +
Sbjct: 311 MLLED--------YPKKATDVYIAWLGENTLEKAMEITALLRENNLKVAVDY-NSKGMKS 361

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +K AD+ N    +I G  E ++ ++ +K+    ++    ++N 
Sbjct: 362 HMKKADKLNTKYCVILGEDELAKNVVVLKNFKTREQEEVSVENI 405


>gi|332654808|ref|ZP_08420550.1| histidine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516151|gb|EGJ45759.1| histidine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 455

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 140/471 (29%), Positives = 214/471 (45%), Gaps = 34/471 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++     GF +         +R+++ +R  Y  YGF P++TPL+E S+ L    
Sbjct: 1   MSK---IQPRTLSGFMELLPARQAQFDRMVEILRETYSLYGFTPLDTPLIEASEVLLAKG 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             E    K ++         +SLR+DLT PLA+YVA N+  + FP R ++IG V+R E+ 
Sbjct: 58  GGE--TEKQIYRFM-KGDTDLSLRFDLTVPLAKYVALNYSKLTFPFRRFQIGKVYRGERA 114

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFR+F Q D+D +G        E  +          +    + I +NNRKIL+G   
Sbjct: 115 QRGRFREFYQADIDVIGDGKLDISNEAEIPAIIYQAFTRLGLKRFQIRVNNRKILNGFYA 174

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +GL           ++R +DKLDK G + VK LL E              LT EQ   +
Sbjct: 175 MLGLTEKS-----GEIMRTVDKLDKIGAEKVKELLMEEEI----------GLTDEQAGEI 219

Query: 241 VSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++F++I    E  +  L          ++G +EL  + + +   G       +  TI RG
Sbjct: 220 LTFIAITGSNEAVLSALEGYRGRNEIFDQGLDELNTVVKYLAAFGVPQTHFAVDLTIARG 279

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG VYE  +              GS+  GGRYD L   +  + +P  G SIG++RL
Sbjct: 280 LDYYTGTVYETTMLD--------HPEIGSICSGGRYDNLAEYYTDKQLPGVGISIGLTRL 331

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              L+      N+     P  +  +    D LS        LR AGIR ++     K F 
Sbjct: 332 FFVLEDQG-YLNDALNTAPADVLILPMTDD-LSPAIALATTLRQAGIRTQIH-AEQKKFK 388

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            ++ YAD+ + P A+  G  E S G+  +KDL  G+++        S  +A
Sbjct: 389 QKISYADKLSIPYAVFLGEDEISSGVCAVKDLQSGEQVKLSPAEAVSHIQA 439


>gi|295839926|ref|ZP_06826859.1| histidine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197696756|gb|EDY43689.1| histidine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 420

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 98/493 (19%), Positives = 179/493 (36%), Gaps = 87/493 (17%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I     + G+  IETP  E      + + +  D  
Sbjct: 3   TFKAPKGTYDLLPPDSGRFLAVREAIAAPLRDAGYGYIETPGFEDVRLFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGR 124
           +K ++      G  ++LR + TA + R V E+            +  G  +R E+   GR
Sbjct: 63  SKEMYVFTTKGGDELALRPEGTAAVLRAVLESNLHKTGNLPVKVWYSGSQYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G            D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPLLDAELIILADQAYRSLGLTGHRILLNSLGDATCRPAYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  + +    +  LR +D                       +   GA L    
Sbjct: 183 DFLRALDLDEETRRRVEINPLRVLDDK----------------RPEVQERLTGAPL---- 222

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +   L  D +    E+  L+ G     +   +L                       V
Sbjct: 223 ---LADHLCEDCKAYHEEVRTLLDGAGVAYEDDPKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMLGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     +         +  +     +          LR AGI  ++  G  + 
Sbjct: 309 RTVLALEAEGVVLDLPP---VTSVYAVPLGEAARRALFEKVTELRRAGIATDLSFG-GRG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
               +K A+R    LA+I G  +   G +QIKDL  G++ +                  +
Sbjct: 365 LKGAMKSANRSGARLALIAGERDLVDGSVQIKDLESGEQHA------------------V 406

Query: 477 PISELVSTVKKIL 489
           P+++ V+ ++++L
Sbjct: 407 PLAQAVAEIQRLL 419


>gi|188995923|ref|YP_001930175.1| histidyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188595603|dbj|BAG34578.1| histidyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 454

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 133/473 (28%), Positives = 218/473 (46%), Gaps = 61/473 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I D+IR +YE +GF+ IETP +E   +L GK+  + DR 
Sbjct: 3   KPSIPKGMRDFSPVEMSRRNYIFDTIREVYELFGFNQIETPTMEMLSTLMGKYGEEGDRL 62

Query: 67  NKGVFSLQDDDG-------QWIS---------------LRYDLTAPLARYVAENFDTIVF 104
              +F + +          + ++               LRYDLT P AR+V  + + I F
Sbjct: 63  ---LFKVLNSGDVLADFCAEELAEKNSLRFAAKACEKGLRYDLTVPFARFVVMHRNEINF 119

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D +GS +   + E+  ++++    +GI    
Sbjct: 120 PFKRYQIQPVWRADRPQKGRYREFYQCDGDVIGSDSLMNEVELIQIISEVFRRLGI---R 176

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I +NNRKIL GI E +     D+ +    +  AIDKLDK GL  V   L         
Sbjct: 177 TRILLNNRKILSGIAEVV-----DEADRLTDITVAIDKLDKIGLDKVNDEL--------- 222

Query: 225 DFTKGANLTSEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
              +      E I+ +  F+ +  D  + +  L   +  +  G KG  EL  I + V + 
Sbjct: 223 ---RTKGFGEEAIERLRPFIEMKGDNREKLDRLKSALASSETGLKGIEELTYILDKVERV 279

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
             +S  + +  ++ RGL YYTG + E          K      GS+ GGGRYD L   F 
Sbjct: 280 QLHS-ELMVDISLARGLSYYTGAILEV---------KALDAEMGSITGGGRYDNLTGIFG 329

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            + +   G S G  R+   +  L+       ++    +  ++   +         Q LR 
Sbjct: 330 LEGMSGVGISFGADRIYDVMMQLDLFPAE--KLTGTQLLFVNFSEEDADSLLPLIQKLRE 387

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
            G+R E++   +K    Q+ YA+  N P   + G  ER+ G + +K++  G++
Sbjct: 388 QGLRTELYPEPAK-IKKQMSYANVANIPYVALVGENERAAGQVNLKNMLTGEQ 439


>gi|269468503|gb|EEZ80161.1| histidyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 424

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 107/485 (22%), Positives = 200/485 (41%), Gaps = 75/485 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   K+  +   +   I N++ +YGF  I TP++E +D+  + + +  D  
Sbjct: 4   KIQAIRGMNDLLPKDSSLWLSVERIISNLFISYGFKNIRTPIVEKTDTFCRAIGEATDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S ++ +G+ +SLR + TA   R + E+        + +  G +FR+E+   GR+R
Sbjct: 64  EKEMYSWKESNGESLSLRPEGTAGCVRAMIEHNLPREGIQKVFYQGAMFRHERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEKI 182
           QF Q  V+  G+     DAE+  M     +++G+K     +        R     +L   
Sbjct: 124 QFHQVGVEVFGADNAKIDAELMAMTHALWQSLGLKNLTLQVNTLGSSEARANYRSVLVDY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D+L+E        D L +     +++L  + +            L + +   ++ 
Sbjct: 184 FTKSKDQLDE--------DSLRRLSTNPLRILDSKNKDMQ--------GLIN-RAPKLMD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +  +   E    ++                       Y +   +I++ +VRGL+YY
Sbjct: 227 YLDDESSQHFDEFKNYLE-----------------------YLNIPYQINTRLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E                 G++  GGRYDGLV +  G+  PA GF+IG+ RL++ L
Sbjct: 264 NRTVFEWTTND--------LGAQGTICAGGRYDGLVEKMGGKPTPAVGFAIGLERLVLLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS-KNFGNQL 421
           +  + S        P+ I  M     +  K       LR +   A ++   +  +F +Q 
Sbjct: 316 EEQKISL----SGSPLSIYLMALGDKAQLKSMQIAHDLRASLPGAILYNDITLGSFKSQF 371

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K AD+ +   A+I G  E S   + +K L                   + +Q T+ + E 
Sbjct: 372 KKADKADADYALILGEEELSNNQISVKPLK-----------------GQSSQQTMSLDEA 414

Query: 482 VSTVK 486
           ++  K
Sbjct: 415 INYFK 419


>gi|259046695|ref|ZP_05737096.1| histidine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036591|gb|EEW37846.1| histidine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 438

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 102/477 (21%), Positives = 184/477 (38%), Gaps = 58/477 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + P+G AD   +E++I + I ++ R I  +Y F+ + TP+ E  D   + + D  D  +
Sbjct: 2   IQKPKGTADLLPEELKIWHYIEETARIILGDYQFEEMRTPMFESYDLFSRGVGDTSDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGR 124
           K ++   D   + I+LR + TA + R   EN         P + Y + P+FR E+   GR
Sbjct: 62  KEMYDFYDKGDRHITLRPEGTAAIVRAYVENKLFGPEHKKPYKVYYMAPMFRYERPQSGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGILE 180
            RQF Q  V+   S+    D E   M  D L+ +G+      I       +R      L 
Sbjct: 122 LRQFHQLGVEVFESTNPATDVETIAMAWDLLKELGLSNMRLVINSLGKTADRIKYREALI 181

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  D+L+E        D  ++     +++L  + + D             +    +
Sbjct: 182 SYLEPFADELSE--------DSKNRLHKNPLRVLDSKDKRDIE---------IVKNAPRI 224

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FLS +      ++ + +       +    +                       VRGL+
Sbjct: 225 LEFLSDEARTHFEKVQQYLNALEIPFEIDETM-----------------------VRGLD 261

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   ++E +        K       ++ GGGRYDGLV    G   P  GF +GI RL++
Sbjct: 262 YYQDTIFEIMTDSKSFGAK------TTICGGGRYDGLVQELDGPETPGFGFGLGIERLVL 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +K  +     ++E+    +  +     +  +    +  LR  G   +      +    Q
Sbjct: 316 LMKDEQVEVPELQELD---VYIVGLGEATEEEVLKLSISLRQQGYSVDRDFF-GRKAKPQ 371

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            K A +    + I  G  E     + +K +  GKE+   ++      ++   QIT+ 
Sbjct: 372 FKNAQKYGAKVVITLGEEELETKQVPVKVMKTGKEVKINLQELYEDFDSIYRQITMD 428


>gi|120403575|ref|YP_953404.1| histidyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|166228587|sp|A1T898|SYH_MYCVP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|119956393|gb|ABM13398.1| histidyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 422

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 92/474 (19%), Positives = 182/474 (38%), Gaps = 68/474 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + P+G  D           + + +       G+  IE P+ E +    + + +  D  +
Sbjct: 7   FKAPKGVPDYLPPASAEFVAVRNGLLAAARRAGYGDIELPIFEDTALFARGVGESTDVVS 66

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+R
Sbjct: 67  KEMYTFADRGDRSVTLRPEGTAGVMRAVIEHGLDRGQLPVKLCYSGPFFRYERPQAGRYR 126

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  V+ +G      DAE+  +      ++G            D       R++L   
Sbjct: 127 QLQQVGVEAIGVDDPALDAEVIAVADAGFRSLGLDGFRLDITSLGDDSCRPQYRELLQEF 186

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L K+ L  + +    +  LR +D       +                        +    
Sbjct: 187 LFKLDLDEETRRRAEINPLRVLDDKRPHMKE-----------------------MTADAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +M+  LS   ++    +   +                          S    I+  +VRG
Sbjct: 224 VMLDHLSDAAKQHFDTVLAHLDAL-----------------------SVPYVINPRMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E +                 +GGGGRYDGL+ +  G+++   GF +G+ R 
Sbjct: 261 LDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMHQLGGRDLSGIGFGLGVDRT 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++   +         V +  +    D+  +  +    LR AG+R ++  G  ++  
Sbjct: 313 LLALRAEGKTAGETAR---VDVYAVPLGGDAKVRLAVLAAQLRAAGVRVDVAYG-DRSLK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             +K ADR    +A++ G  +   G + +K +A G+++   ++   +   +R++
Sbjct: 369 GAMKGADRSGASIALVAGDRDLEAGTVGMKSMATGEQVDVAVEGVVAEVLSRLS 422


>gi|15609717|ref|NP_217096.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15842119|ref|NP_337156.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31793764|ref|NP_856257.1| histidyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638465|ref|YP_978689.1| histidyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148662419|ref|YP_001283942.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823775|ref|YP_001288529.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167968808|ref|ZP_02551085.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404528|ref|ZP_03416709.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412352|ref|ZP_03421112.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215427980|ref|ZP_03425899.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215446829|ref|ZP_03433581.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218754318|ref|ZP_03533114.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558584|ref|ZP_03537660.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224990959|ref|YP_002645646.1| histidyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253798339|ref|YP_003031340.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis KZN 1435]
 gi|254232699|ref|ZP_04926026.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis C]
 gi|254366781|ref|ZP_04982824.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551631|ref|ZP_05142078.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187593|ref|ZP_05765067.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260201709|ref|ZP_05769200.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289444118|ref|ZP_06433862.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289448229|ref|ZP_06437973.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis CPHL_A]
 gi|289553630|ref|ZP_06442840.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis KZN 605]
 gi|289570751|ref|ZP_06450978.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis T17]
 gi|289746372|ref|ZP_06505750.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289751203|ref|ZP_06510581.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis T92]
 gi|289758710|ref|ZP_06518088.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis T85]
 gi|289762751|ref|ZP_06522129.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis GM 1503]
 gi|294994310|ref|ZP_06800001.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635190|ref|ZP_06952970.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297732182|ref|ZP_06961300.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298526053|ref|ZP_07013462.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306776854|ref|ZP_07415191.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu001]
 gi|306780618|ref|ZP_07418955.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu002]
 gi|306785381|ref|ZP_07423703.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu003]
 gi|306789981|ref|ZP_07428303.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu004]
 gi|306794062|ref|ZP_07432364.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu005]
 gi|306798460|ref|ZP_07436762.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu006]
 gi|306804339|ref|ZP_07441007.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu008]
 gi|306807622|ref|ZP_07444290.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu007]
 gi|306969823|ref|ZP_07482484.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu009]
 gi|306972968|ref|ZP_07485629.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu010]
 gi|307080679|ref|ZP_07489849.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu011]
 gi|307085266|ref|ZP_07494379.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu012]
 gi|313659516|ref|ZP_07816396.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039671|sp|P67484|SYH_MYCBO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|54042034|sp|P67483|SYH_MYCTU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166228585|sp|A1KLS8|SYH_MYCBP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166228586|sp|A5U5T0|SYH_MYCTA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|254782338|sp|C1AF49|SYH_MYCBT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|1478232|emb|CAB01263.1| PROBABLE HISTIDYL-TRNA SYNTHETASE HISS (HISTIDINE--TRNA LIGASE)
           (HISRS) (HISTIDINE--TRANSLASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|13882402|gb|AAK46970.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31619358|emb|CAD94796.1| PUTATIVE HISTIDYL-TRNA SYNTHETASE HISS (HISTIDINE--TRNA LIGASE)
           (HISRS) (HISTIDINE--TRANSLASE) [Mycobacterium bovis
           AF2122/97]
 gi|121494113|emb|CAL72591.1| Putative histidyl-tRNA synthetase hisS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124601758|gb|EAY60768.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis C]
 gi|134152292|gb|EBA44337.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506571|gb|ABQ74380.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722302|gb|ABR06927.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis F11]
 gi|224774072|dbj|BAH26878.1| histidyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319842|gb|ACT24445.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis KZN 1435]
 gi|289417037|gb|EFD14277.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289421187|gb|EFD18388.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis CPHL_A]
 gi|289438262|gb|EFD20755.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis KZN 605]
 gi|289544505|gb|EFD48153.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis T17]
 gi|289686900|gb|EFD54388.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289691790|gb|EFD59219.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis T92]
 gi|289710257|gb|EFD74273.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis GM 1503]
 gi|289714274|gb|EFD78286.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis T85]
 gi|298495847|gb|EFI31141.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214780|gb|EFO74179.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu001]
 gi|308326552|gb|EFP15403.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu002]
 gi|308329974|gb|EFP18825.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu003]
 gi|308333591|gb|EFP22442.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu004]
 gi|308337618|gb|EFP26469.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu005]
 gi|308341283|gb|EFP30134.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu006]
 gi|308345943|gb|EFP34794.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu007]
 gi|308349091|gb|EFP37942.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu008]
 gi|308352632|gb|EFP41483.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu009]
 gi|308357659|gb|EFP46510.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu010]
 gi|308361600|gb|EFP50451.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu011]
 gi|308365219|gb|EFP54070.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis SUMu012]
 gi|323718853|gb|EGB28009.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis CDC1551A]
 gi|326904194|gb|EGE51127.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis W-148]
 gi|328458109|gb|AEB03532.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis KZN 4207]
          Length = 423

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 91/474 (19%), Positives = 180/474 (37%), Gaps = 68/474 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              P+G  D    +      + D +       G+  IE P+ E +    + + +  D  +
Sbjct: 7   FSAPKGVPDYVPPDSAQFVAVRDGLLAAARQAGYSHIELPIFEDTALFARGVGESTDVVS 66

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+R
Sbjct: 67  KEMYTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGALPVKLCYAGPFFRYERPQAGRYR 126

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  V+ +G      DAE+  +      ++G            D       R++L   
Sbjct: 127 QLQQVGVEAIGVDDPALDAEVIAIADAGFRSLGLDGFRLEITSLGDESCRPQYRELLQEF 186

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  + L  D +    +  LR +D         ++ +                   +    
Sbjct: 187 LFGLDLDEDTRRRAGINPLRVLDDKRP----ELRAM-------------------TASAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +++  LS   ++    +   +                               I+  +VRG
Sbjct: 224 VLLDHLSDVAKQHFDTVLAHLDAL-----------------------GVPYVINPRMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E +                 +GGGGRYDGL+ +  GQ++   GF +G+ R 
Sbjct: 261 LDYYTKTAFEFV--------HDGLGAQSGIGGGGRYDGLMHQLGGQDLSGIGFGLGVDRT 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++   +  +        +  +     +  +  +    LR AG+R ++  G  +   
Sbjct: 313 VLALRAEGKTAGDSARCD---VFGVPLGEAAKLRLAVLAGRLRAAGVRVDLAYG-DRGLK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             ++ A R    +A++ G  +   G + +KDL  G+++S  + +  +   +R+A
Sbjct: 369 GAMRAAARSGARVALVAGDRDIEAGTVAVKDLTTGEQVSVSMDSVVAEVISRLA 422


>gi|113474598|ref|YP_720659.1| histidyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110165646|gb|ABG50186.1| histidyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 467

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 140/492 (28%), Positives = 221/492 (44%), Gaps = 50/492 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+    P GF +    E R+ + ++D+IR ++E YGF PIETP +E  + L    
Sbjct: 1   MAKADKINYSCPSGFPEFLPGEKRLESYLMDTIRQVFERYGFTPIETPAVERLEVLQAKG 60

Query: 61  PDEDRPNKGVFSLQ---------------DDDGQWISLRYDLTAPLARYVAENFDTIVFP 105
              D     V+ L                D   +   L++D T PLA Y+A + + + FP
Sbjct: 61  NQGDNI---VYGLSPILPPNRQAEKDQAGDSGSEERGLKFDQTVPLAAYIARHLNALNFP 117

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
              Y++  VFR E+   GRFRQF QCD+D VG    +   +  +          IK  D+
Sbjct: 118 FARYQMDVVFRGERAKDGRFRQFRQCDIDVVGRGKLSLLYDAQIPAIIAEIFEAIKIGDF 177

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I INNRK+L G    +G+  +      +  +R +D ++K G   VK  L E        
Sbjct: 178 LIRINNRKVLTGFFASVGVLVE----NIVSCIRIVDTVEKVGEVKVKKALKEI------- 226

Query: 226 FTKGANLTSEQIDIMVSFLSIDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVR 280
                 L+ +Q++ +  F +I          +  + + V+ +    +G  EL  +   VR
Sbjct: 227 -----GLSEDQVEKVWDFTNIKGTVDDVLDKLKSMTKTVENSEVLSQGIYELETVISGVR 281

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
             G +  R  I  +I RGL+YYTG VYE  L              GS+  GGRY+ LV  
Sbjct: 282 NLGVSDQRFCIDLSIARGLDYYTGTVYETTLIG--------HEALGSICSGGRYEELVGT 333

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           F G+ +P  G SIG++RL+  L       +       V++  M      ++ Y   +Q L
Sbjct: 334 FIGEKMPGVGISIGLTRLMSRLLKAGILESFAPTPATVMVVNM--QESLMATYLDVSQKL 391

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R +G+         +  G QL+ AD++  P  II G+ E +  M  +KDL  G+++   I
Sbjct: 392 RRSGMNVITSFD-GRGVGKQLQQADKQKIPFCIIIGSEEAAANMCSLKDLRTGEQMKVPI 450

Query: 461 KNNESWREARVA 472
            +     + R++
Sbjct: 451 GSLADVLKQRLS 462


>gi|54288337|gb|AAV31625.1| predicted histidyl-tRNA synthetase [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 422

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 109/492 (22%), Positives = 182/492 (36%), Gaps = 85/492 (17%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           R +  RG AD   K +     ++++ RN    YGF  + TP+ E+S+   + L +  D  
Sbjct: 3   RLQPARGTADLLPKNMAKHRLVIEAARNAASRYGFQEMATPIFEFSEVFSRPLGESSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K  +S  D  G+ ++LR + TA + R V     T   P + +  GP+FR E+   GR R
Sbjct: 63  TKENYSFSDRGGEMLTLRPENTAGVVRAVISGGLTQNLPLKYFYAGPMFRYERPQKGRMR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDG 177
           QF Q  V+ +G     ADAE+    A  L  +G             D       R  L  
Sbjct: 123 QFHQVGVEYLGPDHSLADAEVIACGARFLATLGVLDDCVLHLNSLGDGESRAAYRSALID 182

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE+ G    D            D   +  +  +++L  +   D S           +  
Sbjct: 183 YLEEFGDQLSD------------DSKTRLKVNPLRILDSKDAGDRS---------ILKDA 221

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  +L+ D +     L   +                                   +VR
Sbjct: 222 PQLQDYLNDDSKTHFATLVAALDAAGVA-----------------------WVFDPLLVR 258

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY    +E +               G+V GGGRYDGL     G  +   G++ G+ R
Sbjct: 259 GLDYYCHTAFEFVTNA--------LGAQGTVLGGGRYDGLAEMLGGPRISGVGWAAGVER 310

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L + +                 +  +  D  +       T+ LR AGI  ++ L    + 
Sbjct: 311 LAMLVGE--------TVPASPKVAIVTADDAAQQAAFGLTETLRDAGI--DIDLPIGGSM 360

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           G +LK AD+    L +I G+ E ++ ++ ++DL+ G +    +                 
Sbjct: 361 GKKLKKADKAGIRLVVIMGSDELAKNIVLLRDLSDGSQQELPLDAEH------------- 407

Query: 478 ISELVSTVKKIL 489
            S+L + + K L
Sbjct: 408 KSDLAAAIAKSL 419


>gi|195456738|ref|XP_002075266.1| GK17081 [Drosophila willistoni]
 gi|194171351|gb|EDW86252.1| GK17081 [Drosophila willistoni]
          Length = 526

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 121/492 (24%), Positives = 216/492 (43%), Gaps = 47/492 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++
Sbjct: 53  NQKFTLKTPKGTRDYAPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED 112

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     G
Sbjct: 113 ---SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTRG 168

Query: 124 RFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           R+R+F QCD D         ADAE   ++A+ L+ + +   +Y I +N+R++LDG+ E  
Sbjct: 169 RYREFYQCDFDIAGTYDPMIADAECVKIVAEILDTLDL--GEYVIKLNHRQLLDGMFEAC 226

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+  D        +  A+DKLDK   + V+  + +              L     D +  
Sbjct: 227 GVPAD----NFRAICSAVDKLDKSPWEDVRKEMVDE-----------KGLDGATADKIGE 271

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +     + E       +K      KG   + ++ +     G     I    ++ RGL
Sbjct: 272 YVRLSGGTELVEKLLADPKLKAVPNAVKGLEGMQLLLKYCSLLG-LEKAISFDLSLARGL 330

Query: 300 EYYTGCVYEAILGFPV-------------------MNEKQKPVVFGSVGGGGRYDGLVSR 340
           +YYTG +YE +L                        +++    + GSV GGGRYD LV  
Sbjct: 331 DYYTGVIYECVLKTEPPLSLPATPIKTSAQNGGDQQDQQGGGGIVGSVAGGGRYDNLVGM 390

Query: 341 FKGQ--NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           F  +   VP  G SIG+ R+   L++  +++        V +           +      
Sbjct: 391 FDPRGKAVPCVGVSIGVERIFSVLEAKFAASKVKLRTNDVEVYVASAHKGLHEQRLRVLN 450

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L  AG++AE     +     QL++ +    PLAII G  E S+G+++++++   +E S 
Sbjct: 451 QLWQAGVKAEHSYKLNPKLLAQLQHCEENQIPLAIILGDAELSQGVVKLREVVTRQEASV 510

Query: 459 EIKNNESWREAR 470
           ++ +       R
Sbjct: 511 KLDDLAEEIIKR 522


>gi|297198348|ref|ZP_06915745.1| histidyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197714402|gb|EDY58436.1| histidyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 420

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 93/474 (19%), Positives = 176/474 (37%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I       G+  IETP  E  +   + + +  D  
Sbjct: 3   TFQAPKGTYDLIPPDSAKFLAVREAIAAPLRTSGYGYIETPGFESVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPGR 124
            K +++ +   G  ++LR + TA + R   E         P + +  G  +R E+   GR
Sbjct: 63  TKEMYAFETKGGDKLALRPEGTASVLRAALEANLHKLGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G++          D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLRNFRILLNSLGDKECRPVYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  D      +  LR +D       + V+  LG+                   
Sbjct: 183 DFLRGLDLDEDTLRRAEINPLRVLDDK----RESVQKQLGD------------------- 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+ EL+       +   +L                       V
Sbjct: 220 APLLRDYLCDACKAYHEEVRELITAAGVAFEDDPKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++               +  +    ++          LR  GI A+   G  K 
Sbjct: 309 RTVLALEAEGVELELPSTTA---VFAVPLGEEARRVLFAKVTELRKVGIAADFAYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R      ++ G  + + G++Q+KD+  G++ +  +    +  E+R
Sbjct: 365 LKGAMKNANRSGARYTVVAGERDLAEGVVQLKDMESGEQSAIGVNEIVAELESR 418


>gi|182624433|ref|ZP_02952217.1| histidyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910436|gb|EDT72813.1| histidyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 415

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 99/462 (21%), Positives = 172/462 (37%), Gaps = 57/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  +G  D    +    + I + +R I   YG   I TP+ E ++   + + +  D 
Sbjct: 1   MAIQAQKGTKDMLPNDAYKWHYIEEKLRKISAEYGIREIRTPMFEATELFKRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + TAP  R   EN       P + +   P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGGRSITLKPEGTAPAVRAFIENSLYADAQPTKMFYFTPCFRYEKMQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKI 182
            R+F Q  ++  GS   + DAE+  ++   L      +        +   K      E +
Sbjct: 121 LREFHQYGIEVFGSQEASIDAEILSLVMRALTEDFGIKGLSLNINSLGCPKCRAKFNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             +  +  +             K   +   + + + +     +  K A    + I     
Sbjct: 181 KQYLKENYDNLCETC-------KTRFEKNPMRIIDCKEKRCKEIVKEAPSILDYI----- 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                  E+  +    +   +   G       I S IVRGL+YY
Sbjct: 229 ----------------------CEECSDHFSKLKAYLDVMG---IEYNIDSQIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E I                +V GGGRYD LV    G   PA GF +G+ RL++ L
Sbjct: 264 SKTVFEVIKDGL------------TVCGGGRYDYLVEEVDGPKTPAMGFGLGLERLLLIL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I E     +       ++  +       LR AGI+AE+     K+   Q+K
Sbjct: 312 DEEGI---EIPEPIRCEVYIGSMGDNAKLEAMKLAFNLRKAGIKAEIDH-LGKSVKAQMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           YA++       + G  E     ++IK ++ G++    +  NE
Sbjct: 368 YANKIGAKYTFVIGDSEIEENKIKIKRMSDGEQFEVSLDINE 409


>gi|50292047|ref|XP_448456.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527768|emb|CAG61417.1| unnamed protein product [Candida glabrata]
          Length = 517

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 129/524 (24%), Positives = 226/524 (43%), Gaps = 67/524 (12%)

Query: 3   KKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           KK+KL+   + P+G  D    ++ IR  I  S+  +++ +G   I+TP+ E  + L    
Sbjct: 18  KKSKLQVSLKTPKGTKDWADTDMVIREAIFSSLSQLFKKHGGVTIDTPVFELREILAGKY 77

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K ++ L+D  G+  SLRYDLT P AR+VA N    +   + Y I  V+R ++ 
Sbjct: 78  GED---SKLIYDLKDQGGELCSLRYDLTVPFARFVAMNN---IQNIKRYHIAKVYRRDQP 131

Query: 121 GPGRFRQFIQCDVDN-VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              + R       D  +  S E+   +  ++        G+  ND+ + +N+RKILDGI 
Sbjct: 132 AMTKGRMREFYQCDFDIAGSYESMVPDAEILSILVEGLTGLGINDFKVKLNHRKILDGIF 191

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +  G+  +D       +  A+DKLDK   + V+            + T     + E  D 
Sbjct: 192 QISGVKDED----VRKISSAVDKLDKSPWEVVRK-----------EITVEKGQSEETADK 236

Query: 240 MVSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +  ++ ++       ++      + G    ++G +E+  + E     G +   I    ++
Sbjct: 237 IGEYVKLNGTLKEIHTILSQDSAITGNELAKQGLDEIATLMEYADAFGISK-FISFDLSL 295

Query: 296 VRGLEYYTGCVYEAILGF--------------PVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            RGL+YYTG +YEA+                    ++  + V  GS+  GGRYD LV+ F
Sbjct: 296 ARGLDYYTGLIYEAVTEASAPPENATELKKKSKSTDDASEYVGVGSIAAGGRYDNLVNMF 355

Query: 342 ------KGQNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---SLS 391
                 K  ++P  G S G+ R+   +K     +         V +       D    L 
Sbjct: 356 AEASGKKSSSIPCVGVSFGVERIFSLIKQRTHLTNAIKPTATQVFVMAFGGGKDWTGLLP 415

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
           +    T+ L  AGI AE    S  N   Q   AD+  CP+A+I G  E + G +++K L 
Sbjct: 416 ERMAITKKLWEAGIEAEYVYKSKANPRKQFDAADKAGCPIAVILGKEEFAEGKVRVKRL- 474

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
            G+E + +                +   +++  VK+ L E  ++
Sbjct: 475 -GQEFANDDGEL------------VDSGDVIEAVKQKLSEVHKD 505


>gi|302039659|ref|YP_003799981.1| histidyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300607723|emb|CBK44056.1| Histidyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 418

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 98/464 (21%), Positives = 173/464 (37%), Gaps = 53/464 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            +  +G  D   +E      I D+ R     YGF  I  P+ E +    + +    D   
Sbjct: 2   IKAIKGVKDLLPEESPRWRFIEDTARQWALRYGFQEIRVPIFETTTLFARSIGASTDIVE 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D DG  ++LR + TA   R   E+       P +    GP+FR+E+   GR R
Sbjct: 62  KEMYTFADRDGSSLTLRPEGTAGTVRAFIEHNRAADPRPQKYCYAGPMFRHERPQAGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V++ G S   AD E+  ++   L  + +      I              +G   
Sbjct: 122 QFHQFGVESFGVSDPRADVEVISLLWRLLSDLTLPGLTLEINN------------LGYTE 169

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D    +          L    L GV+  L                   E   + V    +
Sbjct: 170 DRARYK---------PLLVAFLNGVQSRL-----------CGNCQRRIETNPLRVLDCKV 209

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              +S  E    +  +++  +  +    ++  ++  G       ++  +VRGL+YY    
Sbjct: 210 PECRSATEDAPRLADSLSS-EARDHFERVTSGLQSVGIP---FHMNPRLVRGLDYYCLTA 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E                  +VG GGRYDGLV +  G  VPA GF++G+ R+ + L    
Sbjct: 266 FEVTCS--------HLGAQNAVGAGGRYDGLVEQLGGAAVPAVGFAVGLERIALML---- 313

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +       +      + ++         LR  G+ A+M   ++ +    L+ ADR
Sbjct: 314 --PETVAVPSIPRVYVAAFGTQAVGLGFTLLDELRRTGVPADMDFRAA-SLKAHLRQADR 370

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            N    I+ G  E ++G+  ++++    +    I +  S    R
Sbjct: 371 LNALYTILLGDDEVTKGVATVRNMQTKAQEDVPIPDLASALRTR 414


>gi|257452138|ref|ZP_05617437.1| histidyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058683|ref|ZP_07923168.1| histidyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684359|gb|EFS21194.1| histidyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 413

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 93/464 (20%), Positives = 182/464 (39%), Gaps = 66/464 (14%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   ++    N I +  + ++E+YG   I+TP+ E +D   + + +  D
Sbjct: 1   MKLIKAVRGTKDIIGEDALKYNYISEIAKQVFESYGCQFIKTPIFEETDLFKRGIGEATD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
              K +++ +D   + I+LR + TA + R   EN         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGDRSITLRPENTASVVRSYLENAIYAKEDVSRFYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN----NRKILDGIL 179
           R R+F Q  V+ +G  +   DAE+  M    L+ +GI   +  I       +R      L
Sbjct: 121 RQREFNQIGVEVLGEKSPILDAEIIAMGYKLLQKLGITDLEVRINCIGSNASRTEYRKKL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +      + L          D  ++     +++L  +   D             +    
Sbjct: 181 LEYFTPMKEDL--------CEDCKNRLERNPLRVLDCKVDHDKM-----------DGAPS 221

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++  L  +       + + +                                 S +VRGL
Sbjct: 222 IIDSLFEEERAHYEAVKKYLT-----------------------IFGVPFVEDSGLVRGL 258

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY+  V+E +          K    G+V GGGRYD L+ +   +++ A GF+ G+ R++
Sbjct: 259 DYYSSTVFEIVTN--------KLGSQGTVLGGGRYDNLLKQLGDKDIAAFGFASGVERIM 310

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L+                +       ++L K    T +LR   ++  +   +SK   +
Sbjct: 311 MLLED--------YPKKATDVYIAWLGENTLEKAMEITALLRENNLKVAVDY-NSKGMKS 361

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +K AD+ N    +I G  E ++ ++ +K+    ++    ++N 
Sbjct: 362 HMKKADKLNTKYCVILGEDELAKNVVVLKNFETREQEEVSVENI 405


>gi|331009187|gb|EGH89243.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 429

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 100/487 (20%), Positives = 186/487 (38%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +            
Sbjct: 177 RYRDALVEFLSARLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRVHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTTGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRA 407
           GF++GI RL++ L++L      I     V +       +  +L+  +     L +  +R 
Sbjct: 305 GFAMGIERLVLLLETLGQVPEEIARQVDVYLCAFGEAAELAALALTEQVRDQLPS--LRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E ++ ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALYALILGEEELAKKVIGVKPLRGQGEQQNIAWDALSEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|168208634|ref|ZP_02634259.1| histidyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170712977|gb|EDT25159.1| histidyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 415

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 98/462 (21%), Positives = 172/462 (37%), Gaps = 57/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  +G  D    +    + I + +R I   YG   I TP+ E ++   + + +  D 
Sbjct: 1   MAIQAQKGTKDMLPNDAYKWHYIEEKLRKISAEYGIREIRTPMFEATELFKRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + TAP  R   EN       P + +   P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGGRSITLKPEGTAPAVRAFIENSLYADAQPTKMFYFTPCFRYEKMQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKI 182
            R+F Q  ++  GS   + DAE+  ++   L      +        +   K      E +
Sbjct: 121 LREFHQYGIEVFGSQEASIDAEILSLVMRALTEDFGIKGLSLNINSLGCPKCRAKFNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             +  +  +             K   +   + + + +     +  K A    + I     
Sbjct: 181 KQYLKENYDNLCETC-------KTRFEKNPMRIIDCKEKRCKEIVKEAPSILDYI----- 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                  E+  +    +   +   G +     I   IVRGL+YY
Sbjct: 229 ----------------------CEECSDHFSKLKAYLDVMGID---YNIDPQIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E I                +V GGGRYD LV    G   PA GF +G+ RL++ L
Sbjct: 264 SKTVFEVIKDGL------------TVCGGGRYDYLVEEVDGPKTPAMGFGLGLERLLLIL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I E     +       ++  +       LR AGI+AE+     K+   Q+K
Sbjct: 312 DEEGI---EIPEPVRCEVYIGSMGDNAKLEAMKLAFNLRKAGIKAEIDH-LGKSVKAQMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           YA++       + G  E     ++IK ++ G++    +  NE
Sbjct: 368 YANKIGAKYTFVIGDSEIEENKIKIKRMSDGEQFEISLDINE 409


>gi|169343616|ref|ZP_02864615.1| histidyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169298176|gb|EDS80266.1| histidyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 415

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 94/462 (20%), Positives = 173/462 (37%), Gaps = 57/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  +G  D    +    + I + +R I   YG   I TP+ E ++   + + +  D 
Sbjct: 1   MAIQAQKGTKDMLPNDAYKWHYIEEKLRKISAEYGIREIRTPMFEATELFKRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + TAP  R   EN       P + +   P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGGRSITLKPEGTAPAVRAFIENSLYADAQPTKMFYFTPCFRYEKMQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKI 182
            R+F Q  ++  GS   + DAE+  ++   L      +        +   K      E +
Sbjct: 121 LREFHQYGIEVFGSQEASIDAEILSLVMRALTEDFGIKGLSLNINSLGCPKCRAKFNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             +  +  +             +F    ++++  + +               ++   ++ 
Sbjct: 181 KQYLKENYDNLCETC-----KTRFEKNPMRIIDCKEKRCKE---------IVKEAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           ++  +     ++L   +                               I   IVRGL+YY
Sbjct: 227 YICEECSDHFNKLKAYLD-----------------------VMGIEYNIDPQIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E I                +V GGGRYD LV    G   PA GF +G+ RL++ L
Sbjct: 264 SKTVFEVIKDGL------------TVCGGGRYDYLVEEVDGPKTPAMGFGLGLERLLLIL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I E     +       ++  +       LR AGI+AE+     K+   Q+K
Sbjct: 312 DEEGI---EIPEPVRCEVYIGSMGDNAKLEAMKLAFNLRKAGIKAEIDH-LGKSVKAQMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           YA++       + G  E     ++IK ++ G++    +  NE
Sbjct: 368 YANKIGAKYTFVIGDSEIEENKIKIKRMSDGEQFEISLDINE 409


>gi|282895590|ref|ZP_06303724.1| Histidyl-tRNA synthetase, class IIa [Raphidiopsis brookii D9]
 gi|281199430|gb|EFA74294.1| Histidyl-tRNA synthetase, class IIa [Raphidiopsis brookii D9]
          Length = 477

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 147/512 (28%), Positives = 231/512 (45%), Gaps = 70/512 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +  K+    P GF +    E R+   +LD+IR ++E+YGF PIETP +E  + L    
Sbjct: 1   MTRNEKINFATPSGFPEFLPGEKRLELYLLDTIRKVFESYGFTPIETPAVERLEVLQAKG 60

Query: 61  PDEDRPNKGVFSLQ-----------DDDGQW----ISLRYDLTAPLARYVAENFDTIVFP 105
              D     ++ ++           D  G+      +L++D T PLA Y+A + + + FP
Sbjct: 61  NQGDNI---IYGIEPILPPNRQLERDKSGETGAEARALKFDQTVPLAAYIARHLNELTFP 117

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
              Y++  VFR E+   GRFRQF QCD+D VG    +   +  M    T     I   D+
Sbjct: 118 FARYQMDMVFRGERAKDGRFRQFRQCDIDVVGRDKLSLLYDAQMPAIITEIFAAINIGDF 177

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I INNRKIL G  + +G+  +    +    +  ID L+K G   V+  L +        
Sbjct: 178 VIRINNRKILSGFFQSLGVAQE----QIKTCIGIIDNLEKIGESQVQQELEKT------- 226

Query: 226 FTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKGTIAGEKGFN------ELVVISEL 278
                 ++ EQ   ++ F++ID     + +  + +   +   +GFN      EL  + + 
Sbjct: 227 -----GISLEQSQKIIEFINIDGNVDDVLDKLKHLAVNLPQAEGFNLNLGVSELEAVIDG 281

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
           V+  G  + R  I  +I RGL YYTG VYE  L              GS+  GGRY+ LV
Sbjct: 282 VKNLGVPAQRFCIDLSIARGLNYYTGTVYETTLIG--------HESLGSICSGGRYEELV 333

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
             F G+ +P  G SIG+SRLI  L  L++         P  +  ++   D +  Y   +Q
Sbjct: 334 GIFLGEKMPGVGISIGLSRLINRL--LKADILQKLPPTPAQVMVVNIQEDLMPIYLQVSQ 391

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            LR AGI         K  G Q + AD++     +I G+ E +     +KDL+ G+++  
Sbjct: 392 QLRRAGINVVTNF-EKKQLGKQFQLADKQGIRFCVIIGSQEAANAKSCLKDLSTGEQI-- 448

Query: 459 EIKNNESWREARVAQITIPISELVSTVKKILQ 490
                            +P+  L  T+++ILQ
Sbjct: 449 ----------------EVPLPNLAPTLQQILQ 464


>gi|168204883|ref|ZP_02630888.1| histidyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170663595|gb|EDT16278.1| histidyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 415

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 98/462 (21%), Positives = 171/462 (37%), Gaps = 57/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  +G  D    +    + I + +R I   YG   I TP+ E ++   + + +  D 
Sbjct: 1   MAIQAQKGTKDMLPNDAYKWHYIEEKLRKISAEYGIREIRTPMFEATELFKRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + TAP  R   EN       P + +   P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGGRSITLKPEGTAPAVRAFIENSLYADAQPTKMFYFTPCFRYEKMQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKI 182
            R+F Q  ++  GS   + DAE+  ++   L      +        +   K      E +
Sbjct: 121 LREFHQYGIEVFGSQEASIDAEILSLVMRALTEDFGIKGLSLNINSLGCPKCRAKFNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             +  +  +             K   +   + + + +     +  K A    + I     
Sbjct: 181 KQYLKENYDNLCETC-------KTRFEKNPMRIIDCKEKRCKEIVKEAPSILDYI----- 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                  E+  +    +   +   G       I   IVRGL+YY
Sbjct: 229 ----------------------CEECSDHFSKLKAYLDVMG---IEYNIDPQIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E I                +V GGGRYD LV    G   PA GF +G+ RL++ L
Sbjct: 264 SKTVFEVIKDGL------------TVCGGGRYDYLVEEVDGPKTPAMGFGLGLERLLLIL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I E     +       ++  +       LR AGI+AE+     K+   Q+K
Sbjct: 312 DEEGI---EIPEPVRCEVYIGSMGDNAKLEAMKLAFNLRKAGIKAEIDH-LGKSVKAQMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           YA++       + G  E     ++IK ++ G++    +  NE
Sbjct: 368 YANKIGAKYTFVIGDSEIEENKIKIKRMSDGEQFEISLDINE 409


>gi|166711901|ref|ZP_02243108.1| histidyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 471

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 147/512 (28%), Positives = 233/512 (45%), Gaps = 70/512 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF PI+TP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPIKTPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQD-----------------DDG-QWISLRYDLTAPLARYVAENFDTIVFPCR 107
               V+ +Q                  + G   ++LR+DLT PLARYVAE+   + FP R
Sbjct: 62  ---QVYFVQSTGALANAAAAADDEGAENGGLPELALRFDLTVPLARYVAEHEHDLSFPFR 118

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ +
Sbjct: 119 RYQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKV 178

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +NNRK+L G  E +G+   +    +L VLR +DK+DK G   V+  L            
Sbjct: 179 QLNNRKLLRGFFESLGVAEGE---LQLAVLREVDKIDKRGADYVRDTL----------VG 225

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRK 281
           +G  + +EQ+  +++F+++  E     L +L      V  +    +G  EL  + ELV+ 
Sbjct: 226 EGFGIAAEQVARILAFVAVRSEGHADALAQLQALEASVGASATLGEGIAELREVLELVKA 285

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            G       ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S +
Sbjct: 286 LGVPERAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYESLASHY 337

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
               +P  G SIG++RL   L+         +     ++  M  D   L       + LR
Sbjct: 338 TKSRLPGVGISIGLTRLFWQLREAGLIQGIAESSVQAMVALM--DETRLDDALDIARRLR 395

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             GI  E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL   ++      
Sbjct: 396 IGGINTEVQM-EPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ------ 447

Query: 462 NNESWREARVAQITIPISELVSTVKKILQENK 493
                      Q  +   EL ST+   L++ K
Sbjct: 448 -----------QFDVARDELASTLLVELEQAK 468


>gi|267058|sp|P30053|SYH_STREQ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
          Length = 426

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 95/471 (20%), Positives = 174/471 (36%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D  +        +    R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILSVAAAKWQYVEGVARETFKQYHYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFYDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS+    D E   M     E +GIK    H+             + 
Sbjct: 121 GRLREFHQIGVECFGSANPATDVETIAMAYHLFERLGIKGVTLHLNSLGNAASRAAYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     + + L    + D   +     +++L  + + D          +       ++ 
Sbjct: 181 LIDYLSPMRDTL----SKDSQRRLDENPLRVLDSKEKEDK---------IAVANAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +   + +     +  +++                         +    I + +VRGL+YY
Sbjct: 228 YQDEESQAHFDAVRSMLEAL-----------------------AIPYVIDTNMVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              ++E I                ++  GGRYDGLV  F G   P  GF +G+ RL++ L
Sbjct: 265 NHTIFEFITEVDQSE--------LTICAGGRYDGLVEYFGGPATPGFGFGLGLERLLLIL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    ++E   V I  +  D++        TQ +R  G   E      +    Q K
Sbjct: 317 DKQGV-ELPVEEGLDVYIAVLGADANV--AALALTQAIRRQGFTVERDY-LGRKIKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD     + I  G  E   G   +K     +E++      ++   +  A+
Sbjct: 373 SADTFKAKVVITLGESEIKAGQAVLKHNQTRQEMTVSFDQIQTDFASIFAE 423


>gi|241761554|ref|ZP_04759641.1| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373862|gb|EER63395.1| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 419

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 97/463 (20%), Positives = 186/463 (40%), Gaps = 57/463 (12%)

Query: 7   LRAELP---RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           ++ + P   RG  D   ++    N +++    I + YGF   E P+ E +    + L + 
Sbjct: 1   MKIKTPQPIRGTQDIFGEDSLRFNHVVNKFDEIRKLYGFKRAEIPVFESTAVFARSLGET 60

Query: 64  -DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
            D  +K ++S  D  G+ ++LR + TA L R    +      PC+    GPVFR E+   
Sbjct: 61  TDVVSKEMYSFPDRSGEQLTLRPEFTAGLTRAYLTSGWQQYSPCKIATHGPVFRYERPQK 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF Q D + +G++   AD E+  +    LE++GIK    H+ ++   + D    + 
Sbjct: 121 GRYRQFHQIDAEVIGAAEPEADVELLSLADQLLESLGIK---QHVTLHLNTLGDSASREA 177

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                 +  +      + +  ++     +++L  +   D          + +E+  I+  
Sbjct: 178 WRAALIEYFQGHFDSLSQESQERLTRNPLRILDSKDPNDK---------IIAEKAPIIDD 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+                    E+  +    ++  +  +G           +VRGL+YY
Sbjct: 229 YLT--------------------EEAASFFKAVTTGLDAAG---VAWTRDPRLVRGLDYY 265

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E I          +    G+V  GGRYDGL     G   PA G++ GI RL + +
Sbjct: 266 RHTAFEFIT--------DQLGAQGTVLAGGRYDGLSEALGGNLTPAIGWAAGIERLAMLI 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                      +   + +  +    ++ +        LR AGI A+M      N   +++
Sbjct: 318 DE--------PKEDTMNVAVIPLGEEAKNPAISILSKLRHAGISADMSWRG--NMKRRMQ 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+      A+I G  E +R    ++ +  G++ +  +     
Sbjct: 368 KANGWGVRYAVILGEEELARNEATVRSMVTGEQQAIALDQIVD 410


>gi|290961832|ref|YP_003493014.1| histidyl tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260651358|emb|CBG74480.1| histidyl tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 420

 Score =  233 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 93/474 (19%), Positives = 177/474 (37%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I     + G+  IETP  E  +   + + +  D  
Sbjct: 3   TFQAPKGTYDLIPPDSATYLAVREAIAAPLRDSGYGYIETPGFENVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++ +   G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYAFETKGGDRLALRPEGTASVLRAALEANLHKTGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G++          D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLQNFRILLNSLGDKECRPVYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  D      +  LR +D       + V+  LG+                   
Sbjct: 183 DFLRGLDLDEDTLRRADINPLRVLDDK----REAVQKQLGD------------------- 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+ EL+       +   +L                       V
Sbjct: 220 APLLRDYLCDACKAYHEEVRELITAAGVAFEDDLKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++   +           +  +    ++          LR  GI A+   G  K 
Sbjct: 309 RTVLALEAEGVALELP---ATTSVYAVPLGEEARRLLFAKVTELRKVGIAADFAYG-GKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R      ++ G  + + G++Q+KD+  G++++  +    +  EAR
Sbjct: 365 LKGAMKNANRSGARYTVVAGERDLAEGVVQLKDMESGEQVAVGVNEIVAELEAR 418


>gi|215431535|ref|ZP_03429454.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289754698|ref|ZP_06514076.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289695285|gb|EFD62714.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
          Length = 423

 Score =  233 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 90/474 (18%), Positives = 180/474 (37%), Gaps = 68/474 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              P+G  D    +      + + +       G+  IE P+ E +    + + +  D  +
Sbjct: 7   FSAPKGVPDYVPPDSAQFVAVRNGLLAAARQAGYSHIELPIFEDTALFARGVGESTDVVS 66

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+R
Sbjct: 67  KEMYTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGALPVKLCYAGPFFRYERPQAGRYR 126

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  V+ +G      DAE+  +      ++G            D       R++L   
Sbjct: 127 QLQQVGVEAIGVDDPALDAEVIAIADAGFRSLGLDGFRLEITSLGDESCRPQYRELLQEF 186

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  + L  D +    +  LR +D         ++ +                   +    
Sbjct: 187 LFGLDLDEDTRRRAGINPLRVLDDKRP----ELRAM-------------------TASAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +++  LS   ++    +   +                               I+  +VRG
Sbjct: 224 VLLDHLSDVAKQHFDTVLAHLDAL-----------------------GVPYVINPRMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E +                 +GGGGRYDGL+ +  GQ++   GF +G+ R 
Sbjct: 261 LDYYTKTAFEFV--------HDGLGAQSGIGGGGRYDGLMHQLGGQDLSGIGFGLGVDRT 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++   +  +        +  +     +  +  +    LR AG+R ++  G  +   
Sbjct: 313 VLALRAEGKTAGDSARCD---VFGVPLGEAAKLRLAVLAGRLRAAGVRVDLAYG-DRGLK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             ++ A R    +A++ G  +   G + +KDL  G+++S  + +  +   +R+A
Sbjct: 369 GAMRAAARSGARVALVAGDRDIEAGTVAVKDLTTGEQVSVSMDSVVAEVISRLA 422


>gi|73949320|ref|XP_857466.1| PREDICTED: similar to Histidyl-tRNA synthetase (Histidine--tRNA
           ligase) (HisRS) isoform 3 [Canis familiaris]
          Length = 404

 Score =  233 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 110/456 (24%), Positives = 193/456 (42%), Gaps = 62/456 (13%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           + +R ++ D I + ++ +G + I+TP+ E  ++L     ++   +K ++ L+D  G+ +S
Sbjct: 1   MAVREKVFDVIISCFKRHGAEVIDTPVFELKETLTGKYGED---SKLIYDLKDQGGELLS 57

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           LRYDLT P ARY+A N  T +             N     GR+R+F Q            
Sbjct: 58  LRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRGRYREFYQ------------ 104

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                                     +N+R+ILDG+    G+       +   +  ++DK
Sbjct: 105 -------------------------CVNDRRILDGMFAICGVPDS----KFRTICSSVDK 135

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL---YELV 259
           LDK   + VK            +      L  E  D +  ++      S+ E       +
Sbjct: 136 LDKVSWEEVK-----------NEMVGEKGLAPEVADHIGDYVQQHGGISLVEQLLQDPEL 184

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
                  +G  +L ++ E +   G  +++I    ++ RGL+YYTG +YEA+L    +   
Sbjct: 185 SQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARGLDYYTGVIYEAVLLQTPVQAG 243

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           ++P+  GSV  GGRYDGLV  F    + VP  G SIG+ R+   ++    +T        
Sbjct: 244 EEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEATEEKVRTTE 303

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +         L +       L  AGI+AE+    +    NQL+Y +    PL  I G 
Sbjct: 304 TQVLVASAQKKLLEERLKLVSELWNAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGE 363

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            E   G+++++ +A  +E+    ++     + R +Q
Sbjct: 364 QELKDGVIKLRSVASREEVDVPREDLVEEIKRRTSQ 399


>gi|293400600|ref|ZP_06644745.1| histidine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305626|gb|EFE46870.1| histidine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 441

 Score =  233 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 110/493 (22%), Positives = 195/493 (39%), Gaps = 68/493 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     +R ++PRG  D   K+I   +++ D IR     Y +D I TP+ E+++   +  
Sbjct: 1   MNGGMTMRYQVPRGTQDIQPKDISKWHKLEDMIRQFCYVYNYDEIRTPIFEHTNVFKRGN 60

Query: 61  PDEDRPNKGVFSLQ-DDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRN 117
              D  NK +++ Q ++    ++LR + TA +AR   E+        P + Y +GP  R+
Sbjct: 61  DSSDMVNKEMYTFQLENSATSLTLRPEGTAGVARAFVEHKMFGNADLPVKMYYVGPQCRH 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR R F Q  V+ +G+ +   D E   +    + A+G+K     I          
Sbjct: 121 ERPQKGRMRIFHQFGVEVIGAKSPMLDVETIALGWSFVSALGLKDMKVLINTLGDDESRA 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
                      +  +  I    +D   ++    +++L  +   D             +  
Sbjct: 181 AYRAAL----KEHFKNDIDTMCVDCKRRYEQNPLRILDCKVDHDKD---------IMKTA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             M  +L+   ++   E+ E +       +  + L                       VR
Sbjct: 228 PKMEDYLNDASKQYFKEVLEGLDALGIPYEVDDRL-----------------------VR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-VPATGFSIGIS 356
           GL+YYT  V+E +     M          +V  GGRYDGLV  F G   +   G+++G+ 
Sbjct: 265 GLDYYTHTVFEVVSVNKEM------GAQSTVFAGGRYDGLVEYFGGPEGMSGIGWAMGLE 318

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RLI+A ++   + +    +   ++   D       +    T  LRT G R +      ++
Sbjct: 319 RLIIACEAEGITLDEEDGLDAYVLCLAD---SVHKEVLAITTELRTNGYRTDTDY-LGRS 374

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           F  Q K  DR++   AI+ G  E + G + IKD+                      Q T+
Sbjct: 375 FKAQFKTVDRKHARCAILIGDSEVANGTVNIKDVKT------------------QQQYTV 416

Query: 477 PISELVSTVKKIL 489
           P+ EL+ T+ +I 
Sbjct: 417 PMEELIPTMDRIF 429


>gi|297180847|gb|ADI17052.1| histidyl-tRNA synthetase [uncultured alpha proteobacterium
           HF0010_30A23]
          Length = 413

 Score =  233 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 101/475 (21%), Positives = 174/475 (36%), Gaps = 68/475 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  +G  D    E R +  ++D+   +   YG+D +ETP+ E  +   + L
Sbjct: 1   MAKQ----LQPVKGTRDLYGAEGRAQRHVVDTADAVSRAYGYDRMETPMFEQVEVFNRPL 56

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +F  Q   G  + LR + TA + R V  N  T   P R +  GP+FR E+
Sbjct: 57  GESSDVVTKEMFDFQTKGGDHVVLRPENTAGVVRSVISNGLTHDLPGRYFYAGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+ +G    TAD ++       L  +G+  +     +      +R  
Sbjct: 117 PQAGRYRQFTQIGVELIGPEQPTADVDVIACGWQILANLGLTDHITVHLNTLGDTESRNA 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        + L+E        D L +     +++L  +   D       GA    
Sbjct: 177 YRTELVAYFSDHREHLSE--------DSLARLAKNPLRILDSKDEGDR--ALLPGA---- 222

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                 V  L+   ++    +   +       +  + L                      
Sbjct: 223 ---PKFVDHLNALSQEHYAAVKAGLDNLGLPYRHDDNL---------------------- 257

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRG +YY    +E I         ++    G+V GGGRYDGL     G  +   G++ G
Sbjct: 258 -VRGFDYYCHTAFEFIT--------EQLGAQGTVLGGGRYDGLSKLLGGPQMAGVGWAAG 308

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL + L                 +  +     +    Q     LR  G+R +M    S
Sbjct: 309 VDRLAMLLGEAPGEPAP--------LAFVPLGEQAEVVAQRLVYELRARGVRVDMNY--S 358

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            N   +L  A++      +I G  E + G+  ++D+  G++    + +      A
Sbjct: 359 GNMKKRLTRANKVGAQRTVILGEDELNAGIALVRDMEGGEQREVALSSLVEDLSA 413


>gi|262198185|ref|YP_003269394.1| histidyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262081532|gb|ACY17501.1| histidyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 423

 Score =  233 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 97/468 (20%), Positives = 182/468 (38%), Gaps = 58/468 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D    E         + R+++E +G+  + TP++E ++   + + +  D   
Sbjct: 5   IKSPRGMNDLLPSESAKWLYFEGACRSLFERFGYHEVRTPVVESTELFARGIGEATDIVE 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D   + +++R ++TA  AR   E+         R +  GP+FR E+   GR+R
Sbjct: 65  KEMYTFRDRKDRSLTMRPEMTAGCARAYIEHAVHKREPVTRWFYTGPMFRYERMQTGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEKI 182
           QF Q  V+  GS A + DAE   M     + +G+   +  +      ++R+     L   
Sbjct: 125 QFYQVGVEAFGSDAPSIDAEQIAMCYALYQQLGVTSLEVVVNSVGGGDDRQRYRDALLAF 184

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                + L          D   +  +  +++L  +          +           ++ 
Sbjct: 185 LTPQREAL--------CGDCQRRLDVNPLRILDCK---------VESCRAIVADAPNILE 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L  D       +   +                              ++   IVRGL+YY
Sbjct: 228 SLGADSRAHFDAVCAQLTAF-----------------------GVEFRVDPKIVRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG V+E       +          ++ GGGRYD L+ R  G   PA GF++G+ R +++L
Sbjct: 265 TGTVFEI------LGHSAGLGTQSTLVGGGRYDTLLERLGGPATPAVGFALGVERAVLSL 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +            G  L        ++ ++       LR AG+R E+   +      Q K
Sbjct: 319 E-----GEADDYQGKPLAYLASRGDEARARALALAYRLRLAGLRIEVEHRAVG-LKAQFK 372

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            AD+      I  G  E + G ++I+D+ +G+E    +   E+  + R
Sbjct: 373 RADKLGARYVITIGEDELASGEVKIRDMKRGQESPAALDELEAALKQR 420


>gi|224437682|ref|ZP_03658629.1| histidyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144129|ref|ZP_07806322.1| histidyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129160|gb|EFR46777.1| histidyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 449

 Score =  233 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 137/476 (28%), Positives = 228/476 (47%), Gaps = 36/476 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      GF D   KE   +  +L  + +++ N+GF PIETP LEY++ L K   +E   
Sbjct: 4   ITPRTLSGFKDRLPKEALAKAHLLSKVSSVFMNFGFVPIETPHLEYAEVLVKQGSEE--I 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V++  + +  P + + IG VFR E+   GR+R
Sbjct: 62  QKELYRFKDHGDRDVALRFDLTVPLARFVSQYKNEVDLPFKRFAIGNVFRGERAQRGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS + + DAE+  ++  +L  +G   +++ I +N+RKIL+GI E  G+ G
Sbjct: 122 EFTQCDFDFIGSDSISCDAEILQVIYASLVGLG--IDEFTIWLNHRKILNGICEYCGIVG 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +  +N     LR IDKLDK G + V   L +             +L+S Q D ++ + SI
Sbjct: 180 ERNVNA---TLRIIDKLDKIGKEAVSAELQKE-----------LSLSSTQADNLLEYTSI 225

Query: 247 ----DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
               D E    ++  + +      +G  +L  +  ++     + +  +++ +I RGL YY
Sbjct: 226 KQQGDSESFFKQISFMEEWNENTREGIKDLKALYAVLEPLQMDRDTYRVNFSIARGLGYY 285

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG VYE  L              GSV  GGRYD L   F    +   G SIGI RL+   
Sbjct: 286 TGIVYETTLNA--------LKSIGSVCSGGRYDNLTRTFSKDKMSGVGASIGIDRLLA-- 335

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +LE      K+        +  DS          +  R + +  E++   SK    Q  
Sbjct: 336 -ALEELNLLDKKATSARALIVCMDSTYFGYAHFLAESFRRSKVPIEVYPEISK-LKKQFG 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE--IKNNESWREARVAQITI 476
           YA+ +     I+ G  E +   L +K++  G ++ +   +K     +E    ++ I
Sbjct: 394 YANAKGHEFVIVIGESEFNSKTLTLKNMTSGMQMDKLSFLKALTLIQEDEPEELKI 449


>gi|182439819|ref|YP_001827538.1| histidyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326780483|ref|ZP_08239748.1| Histidyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|229558743|sp|B1W3H3|SYH_STRGG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|178468335|dbj|BAG22855.1| putative histidyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326660816|gb|EGE45662.1| Histidyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 420

 Score =  233 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 89/474 (18%), Positives = 172/474 (36%), Gaps = 69/474 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D           + ++I     + G+  IETP  E  +   + + +  D  
Sbjct: 3   TFQAPKGTYDLTPPRSATFLAVREAIAAPLRDSGYGYIETPGFENVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            K +++L    G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  TKEMYTLTTKGGSQLALRPEGTASVLRAALEANLHKAGNLPVKLWYSGSYYRYERPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G++R         D       R+ L 
Sbjct: 123 YRHFSQVGAEAIGTEDPVLDAELIILADQAYRSLGLRRFRILLNSLGDKECRPVYREALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  + +    +  LR +D         V+  L +                   
Sbjct: 183 TFLRDLDLDEETRRRIEINPLRVLDDK----RADVRKQLTD------------------- 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +  +L    +    E+  L+       +   +L                       V
Sbjct: 220 APKLRDYLCDACKAYHEEVRALLTTAGVAFEDDEKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGAQSAVGGGGRYDGLSEMIGGPELPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     +         +  +    ++          LR AG+ A+   G  + 
Sbjct: 309 RTVLALEAEGIELDLPSTTS---VYAVPLGEEARRVLFGVVTELRRAGVAADFAFG-GRG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +K A+R      ++ G  + + G++Q+KD+  G++    +    +    R
Sbjct: 365 LKGAMKSANRSGARYTLVAGERDLAEGVVQLKDMESGEQGPVALAEVAAELTKR 418


>gi|330894495|gb|EGH27156.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 429

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 99/487 (20%), Positives = 184/487 (37%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +            
Sbjct: 177 RYRDALVEFLSARLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRVHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GG YDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGLYDGLVEQMGGKPTTGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRA 407
           GF++GI RL++ L++L      I     V +       +  +L+  +     L +  +R 
Sbjct: 305 GFAMGIERLVLLLETLGQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDQLPS--LRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|297181247|gb|ADI17441.1| histidyl-tRNA synthetase [uncultured Rhodospirillales bacterium
           HF0070_31K06]
          Length = 414

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 177/463 (38%), Gaps = 64/463 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D   + +R    ++   R++ E YGF+ + TP+ E SD   + L D  D   
Sbjct: 4   LQPVRGTHDLLPEAMRAHRSVIGCARDVAERYGFEEMATPIFESSDVFRRTLGDTSDIVT 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++     G+ I+LR + TA +AR           P + +  GP+FR+E+   GR RQ
Sbjct: 64  KEMYTFTTKGGEEITLRPENTAGVARCFISEGLAQSTPLKFFYAGPMFRHERPQKGRLRQ 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKI 182
           F Q  ++ VG +   AD E+    A  L  +G++       +      +R +    L   
Sbjct: 124 FHQIGIETVGFAGPQADIEIIAAGARILSELGLQGKTVLQLNTLGDSESRSVYREALVTY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D+L++        +  D+     +++L  +   D S                  +
Sbjct: 184 FTKRVDELSQ--------ESRDRLNRNPLRILDSKNEGDRS---------VVADAPSFTN 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L+ +      ++ E +       +    L                       VRGL+YY
Sbjct: 227 HLNEESRAFFEQVQEGLTALGIAFELNERL-----------------------VRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E                 G+V  GGRYDGL+    G   P  G++ G+       
Sbjct: 264 GHTAFEFTTTE--------LGAQGAVMAGGRYDGLIETMGGPKTPGIGWAAGV------- 308

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
               +            +  +   + + ++  +  + LR +G+R ++  G S N G ++K
Sbjct: 309 -ERLAMLRGDPPPARRPVALVPLGAAAEARAFVLAEELRASGLRVDV--GFSGNLGRRMK 365

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            ADR N   A++ G  E ++ +  ++D+  G++    +     
Sbjct: 366 RADRMNAAAAVLIGDDELAKDVATVRDMDGGEQEEVPLGALRE 408


>gi|260753919|ref|YP_003226812.1| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258553282|gb|ACV76228.1| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 419

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 96/463 (20%), Positives = 186/463 (40%), Gaps = 57/463 (12%)

Query: 7   LRAELP---RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           ++ + P   RG  D   ++    N +++    I + YGF   E P+ E +    + L + 
Sbjct: 1   MKIKTPQPIRGTQDIFGEDSLRFNHVVNKFDEIRKLYGFKRAEIPVFESTAVFARSLGET 60

Query: 64  -DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
            D  +K ++S  D  G+ ++LR + TA L R    +      PC+    GPVFR E+   
Sbjct: 61  TDVVSKEMYSFPDRSGEQLTLRPEFTAGLTRAYLTSGWQQYSPCKIATHGPVFRYERPQK 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF Q D + +G++   AD E+  +    LE++GIK    H+ ++   + D    + 
Sbjct: 121 GRYRQFHQIDAEVIGAAEPEADVELLSLADQLLESLGIK---QHVTLHLNTLGDSASREA 177

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                 +  +      + +  ++     +++L  +   D          + +E+  I+  
Sbjct: 178 WRAALIEYFQGHFDSLSQESQERLTRNPLRILDSKDPNDK---------IIAEKAPIIDD 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+                    E+  +    ++  +  +G           +VRGL+YY
Sbjct: 229 YLT--------------------EEAASFFKAVTTGLDAAG---VAWTRDPRLVRGLDYY 265

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E I          +    G+V  GGRYDGL     G   PA G++ GI RL + +
Sbjct: 266 RHTAFEFIT--------DQLGAQGTVLAGGRYDGLSEALGGNLTPAIGWAAGIERLAMLI 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                      +   + +  +    ++ +        LR AGI A+M      N   +++
Sbjct: 318 DE--------PKEDAMNVAVIPLGEEAKNPAISILSKLRHAGISADMSWRG--NMKRRMQ 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+      A+I G  E ++    ++ +  G++ +  +     
Sbjct: 368 KANGWGVRYAVILGEEELAQNEATVRSMVTGEQQAIALDQIVD 410


>gi|297183690|gb|ADI19815.1| histidyl-tRNA synthetase [uncultured alpha proteobacterium
           EB000_37G09]
          Length = 421

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 105/459 (22%), Positives = 181/459 (39%), Gaps = 58/459 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG +D   +E   +N ++ +  N+ E YGF  + TP+ E+++   + L
Sbjct: 1   MMKQM----QPVRGTSDLIPEEKARQNHVISTALNVAERYGFRDMATPIFEFTEVFSRPL 56

Query: 61  P-DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
               D  +K  ++ +D  G  ++LR + TA   R V  N  T   P R +  GP+FR E+
Sbjct: 57  GASSDVVSKETYTFEDRGGTSLTLRPEGTAAAMRAVISNGLTQALPHRWFYAGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR RQF Q   + +G  +  ADAE+    A  LE +G+                   
Sbjct: 117 PQKGRMRQFNQFGCELIGPHSALADAEIIGSGAQILEELGV------------------- 157

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                           VL      D    Q  +  L    T  S D ++ +    E   +
Sbjct: 158 ------------LDKCVLHLNSLGDTQSRQNFREALITYFTRFSDDLSEDSRRRLETNPL 205

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            +     D ++++ +    +   ++ ++       ++  +      S        +VRGL
Sbjct: 206 RILDSKDDGDRALLDDAPRLPDYLS-DEARRHFDGVTAALDA---ASIGWTHDPLLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY    +E +               G+V GGGRYDGL     G  +PA GF+ G+ RL 
Sbjct: 262 DYYAHTAFEFVT--------DALGAQGTVLGGGRYDGLSETLGGPALPAVGFAAGVERLA 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + ++           +    I  +  D  + +      Q LR AG+ A   +  +   G 
Sbjct: 314 LLIEQ--------PHLPSSDIAVLAADETAEAASFGIAQSLRHAGLSAVQLMSGA--MGK 363

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           ++K A +  C   +I G  E  R +  +KD+  G +   
Sbjct: 364 KMKQAHKMGCRFVVILGADELVRDVAIVKDMQTGTQSDI 402


>gi|283856488|ref|YP_163243.2| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775492|gb|AAV90132.2| histidyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 419

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 97/463 (20%), Positives = 186/463 (40%), Gaps = 57/463 (12%)

Query: 7   LRAELP---RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           ++ + P   RG  D   ++    N +++    I + YGF   E P+ E +    + L + 
Sbjct: 1   MKIKTPQPIRGTQDIFGEDSLRFNHVVNKFDEIRKLYGFKRAEIPVFESTAVFARSLGET 60

Query: 64  -DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
            D  +K ++S  D  G+ ++LR + TA L R    +      PC+    GPVFR E+   
Sbjct: 61  TDVVSKEMYSFPDRSGEQLTLRPEFTAGLTRAYLTSGWQQYSPCKIATHGPVFRYERPQK 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF Q D + +G++   AD E+  +    LE++GIK    H+ ++   + D    + 
Sbjct: 121 GRYRQFHQIDAEVIGAAEPEADVELLSLADQLLESLGIK---QHVTLHLNTLGDSASREA 177

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                 +  +      + +  ++     +++L  +   D          + +E+  I+  
Sbjct: 178 WRAALIEYFQGHFDSLSQESQERLTRNPLRILDSKDPNDK---------IIAEKAPIIDD 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L+                    E+  +    ++  +  +G           +VRGL+YY
Sbjct: 229 YLT--------------------EEAASFFKAVTTGLDAAG---VAWTRDPRLVRGLDYY 265

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E I          +    G+V  GGRYDGL     G   PA G++ GI RL + +
Sbjct: 266 RHTAFEFIT--------DQLGAQGTVLAGGRYDGLSEALGGNLTPAIGWAAGIERLAMLI 317

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                      +   + +  +    ++ +        LR AGI A+M      N   +++
Sbjct: 318 DE--------PKEDAMNVAVIPLGEEAKNPAISILSKLRHAGISADMSWRG--NMKRRMQ 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+      A+I G  E +R    ++ +  G++ +  +     
Sbjct: 368 KANGWGVRYAVILGEEELARNEATVRSMVTGEQQAIALDQIVD 410


>gi|225011733|ref|ZP_03702171.1| histidyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004236|gb|EEG42208.1| histidyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 456

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 130/482 (26%), Positives = 209/482 (43%), Gaps = 54/482 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR 65
           ++   P+G  D    EI  RN I   +++ +E +GF PIETP  E  ++L G +  + DR
Sbjct: 3   IKPATPKGTRDFSATEIAKRNYIRGVLQSTFEYFGFQPIETPSFERLETLTGVYGEEGDR 62

Query: 66  PNKGVFSLQDDDG-------------------QWI---SLRYDLTAPLARYVAENFDTIV 103
               VF + +                      + +   +LRYDLT P ARYVA++ + + 
Sbjct: 63  L---VFKILNSGEKVKKADTEALASGAYQKFSRSLSEKALRYDLTVPFARYVAQHQNELT 119

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
           FP R Y+I PV+R ++   GRF++F QCD D VG  +   + E+  +       +  K  
Sbjct: 120 FPFRRYQIQPVWRADRPQHGRFQEFYQCDADIVGDRSLWQEVEVLALYDKAFSDL--KIE 177

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
              + +N+RKIL GI  K+G          +    A+DKLDK G +GV   L        
Sbjct: 178 GVSLKVNHRKILAGIAGKLGAEE-----RLIDFTIALDKLDKIGKEGVFEELKSK----- 227

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                G N  + Q+   +  L     + +  L  ++     G KG  EL  I      + 
Sbjct: 228 -----GFNAGALQLLEELLSLQGTASEQLDVLKSILADQPEGIKGIEELEFIFNQFNDNA 282

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
            +S ++    T+ RGL YYTG + E      +          GS+GGGGRYD L + F  
Sbjct: 283 LHSVQLNFDLTLARGLHYYTGMIVEVSAPANIK--------MGSIGGGGRYDDLTATFGL 334

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            N+   G S G  R+ + ++ L      +       +   +  S + S    Y   LR  
Sbjct: 335 NNMSGIGISFGFERIYLVMEELHLFPEELLPGT--EVLFANFGSLAASTAYSYVSKLRKL 392

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +E++   SK    QL YA+++     ++ G  E  +    +KD+  G + +  + + 
Sbjct: 393 NCSSELYPSESK-LKKQLGYANQKGIQKVVLIGEEEIKQKTFILKDMKLGNQTTHPLADL 451

Query: 464 ES 465
            S
Sbjct: 452 IS 453


>gi|320170366|gb|EFW47265.1| histidyl-tRNA synthetase-PB [Capsaspora owczarzaki ATCC 30864]
          Length = 537

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 126/491 (25%), Positives = 208/491 (42%), Gaps = 55/491 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              + P+G  D    ++ IR R+  +I ++++ +G   I+TP  E  D+L     ++   
Sbjct: 77  FVLKAPKGTQDFDPTQMAIRERVFGTIISVFKKHGAVTIDTPAFELKDTLLGKYGED--- 133

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++ L D  G+  SLRYDLT P ARYVA N    +             N +   GRFR
Sbjct: 134 SKLIYDLADQGGELCSLRYDLTVPFARYVAMNKIRQIKRYHIA-RVYRRDNPQMNRGRFR 192

Query: 127 QFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           +F QCD D      A   DAE   ++ D L A+  + N++ I IN+RKILDGI    G+ 
Sbjct: 193 EFYQCDFDIAGEYDAMIPDAECVAVVYDVLSAL--QLNNFVIKINHRKILDGIFALCGVP 250

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +        +  A+DKLDK   + V+            +      L  +  D +  F+ 
Sbjct: 251 AES----FRAICSAVDKLDKAPWEEVR-----------QEMVGEKGLDPKVADKIGEFVL 295

Query: 246 IDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +   + + +       +      ++G   L  + E +       +R+    ++ RGL+YY
Sbjct: 296 LKGGQDLIKKLLEESELSKNEMAKEGLKLLTTLFEYLEIYNVL-DRVSFDLSLARGLDYY 354

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK-GQNVPATGFSIGISRLIVA 361
           TG +YEA+L              GSV GGGRYD LV  F    +VP  G S+GI RL   
Sbjct: 355 TGVIYEAVLEGA---------QVGSVAGGGRYDDLVGMFAGKGSVPCVGVSLGIERLFAI 405

Query: 362 LKSLESSTNNIK-EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           + + E+    +K +     +         L +       +   GI AE+   ++    +Q
Sbjct: 406 ILARETGNGTVKVKTSSTQVLVASGQKGLLKQRMDLLSEMWKEGIAAEILYKNNPKILDQ 465

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            +Y +    PL +  G  E   G + ++ +A  +E                    +  + 
Sbjct: 466 FQYCEDHMIPLCLTIGEDEIKAGQVTLRVVATRQET------------------KVARAN 507

Query: 481 LVSTVKKILQE 491
           L   V++ L+E
Sbjct: 508 LAEEVRRALRE 518


>gi|119192488|ref|XP_001246850.1| histidyl-tRNA synthetase, mitochondrial precursor [Coccidioides
           immitis RS]
          Length = 590

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 127/535 (23%), Positives = 220/535 (41%), Gaps = 76/535 (14%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M K       + P+G  D    +  +R+RI  +I N+++ +G   ++TP+ E  + L   
Sbjct: 68  MPKDKVTFNLKTPKGTKDWAGPDALLRDRIFSTITNVFKRHGGTALDTPVFELREILAGK 127

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N D  V   + Y I  V+R ++
Sbjct: 128 YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPD--VRSIKRYHIAKVYRRDQ 182

Query: 120 H----GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
                G  R       D+      A   DAE+  ++++  E +G  + +Y I IN+RKIL
Sbjct: 183 PAMTKGRMREFYQCDFDIAGANFDAMVPDAEILRIISEVFEDLG-WKGNYLIKINHRKIL 241

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           DG+ E  G+  +    +   +  A+DKLDK     V+  + +              L   
Sbjct: 242 DGVFEVCGVPKE----KIRTISSAVDKLDKLPWADVRKEMVDE-----------KGLDPA 286

Query: 236 QIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             D + +++     + + +     E++ G  + + G  E+ ++ + ++      ++I   
Sbjct: 287 VADKIETYVVRKGGRELLDSLKSDEMLVGNSSAKTGLEEMGLLMDYLQAFNIL-DKISFD 345

Query: 293 STIVRGLEYYTGCVYEAI----------------------------LGFPVMNEKQKPVV 324
            ++ RGL+YYTG +YE +                            +           V 
Sbjct: 346 MSLARGLDYYTGVIYEVVTEGSAPATTSSAPEAQKIQRSGKREKTKVDADEDRSNDPSVG 405

Query: 325 FGSVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITT 382
            GSV  GGRYD LV  F  +  +P  G S G+ R+    K+ +E   +       V +  
Sbjct: 406 VGSVAAGGRYDELVGMFSSKAQIPCVGISFGVDRIFSITKARMEREKSEALRSSEVDVYV 465

Query: 383 MDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           M          L +     +ML  AGI+AE           Q K A+  + P A+I G  
Sbjct: 466 MAFGGKGFTGLLKERMDICRMLWDAGIKAEFSYKVKPKLPQQFKAAESGSVPFAVILGED 525

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           E + G  +IK++                       + + I+ L + VK  L+   
Sbjct: 526 ELAAGEGRIKEM------------GLPEGHPEKDGVLVKIAALPTEVKTRLERRN 568


>gi|260205901|ref|ZP_05773392.1| histidyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289575288|ref|ZP_06455515.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis K85]
 gi|289539719|gb|EFD44297.1| histidyl-tRNA synthetase hisS [Mycobacterium tuberculosis K85]
          Length = 423

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 91/474 (19%), Positives = 179/474 (37%), Gaps = 68/474 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              P+G  D    +      + D +       G+  IE P+ E +    + + +  D  +
Sbjct: 7   FSAPKGVPDYVPPDSAQFVAVRDGLLAAARQAGYSHIELPIFEDTALFARGVGESTDVVS 66

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+R
Sbjct: 67  KEMYTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGALPVKLCYAGPFFRYERPQAGRYR 126

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  V+ +G      DAE+  +      ++G            D       R++L   
Sbjct: 127 QLQQVGVEAIGVDDPALDAEVIAIADAGFRSLGLDGFRLEITSLGDESCRPQYRELLQEF 186

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  + L  D +    +  LR +D         ++ +                   +    
Sbjct: 187 LFGLDLDEDTRRRAGINPLRVLDDKRP----ELRAM-------------------TASAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +++  LS   ++    +   +                               I+  +VRG
Sbjct: 224 VLLDHLSDVAKQHFDTVLAHLDAL-----------------------GVPYVINPRMVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E +                 +GGGGRYDGL+ +  GQ++   GF +G+ R 
Sbjct: 261 LDYYTKTAFEFV--------HDGLGAQSGIGGGGRYDGLMHQLGGQDLSGIGFGLGVDRT 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++   +  +        +  +     +  +  +    LR AG+R ++  G  +   
Sbjct: 313 VLALRAEGKTAGDSARCD---VFGVPLGEAAKLRLAVLAGRLRAAGVRVDLAYG-DRGLK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             ++ A R    +A++ G  +   G + +KDL  G+++S    +  +   +R+A
Sbjct: 369 GAMRAAARSGARVALVAGDRDIEAGTVAVKDLTTGEQVSVSTDSVVAEVISRLA 422


>gi|53802991|ref|YP_115282.1| histidyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81680831|sp|Q603B8|SYH_METCA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|53756752|gb|AAU91043.1| histidyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 422

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 99/483 (20%), Positives = 182/483 (37%), Gaps = 71/483 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D          ++   IR++  NYG+  I  P++E ++   + + +  D  
Sbjct: 4   KIQAIRGMHDILPDMTPRWQQVEHQIRSVMANYGYREIRLPIVEKTELFKRSIGEVTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D +G  ++LR + TA   R   E+        R +  GP+FR+E+   GR+R
Sbjct: 64  EKEMYVFEDRNGDSLTLRPEGTAGCLRACLEHGLLHNQTHRLWYAGPMFRHERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+  G      DAE+  +     + +G+              L   L  +G   
Sbjct: 124 QFHQVGVEVFGMPGPDIDAELIFLSRRLWQRLGVAH-----------KLRLELNSLGTPD 172

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +                        + +L +   +N       +    E   + +     
Sbjct: 173 ERLAY--------------------RQILVDYLRENYDALDADSARRLETNPLRILDSKN 212

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              K +     ++   + G         ++EL+           I+  +VRGL+YY   V
Sbjct: 213 PAMKDLLAGAPVLADHLGG-ASRAHFEGLTELLDA---AEIPYVINPRLVRGLDYYCNTV 268

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          +    G+V  GGRYDGLV++  G++  A GF++G+ RLI       
Sbjct: 269 FEWVT--------DELGTQGTVCAGGRYDGLVAQLGGRDSSAIGFALGMERLIEL----- 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYA 424
           +     +    +   T+   ++         +MLR A   +R  +  G   +F NQ K A
Sbjct: 316 TGETFAENAPHIYFITVGTAAERRGAV--LAEMLRDAFPSLRLVVNCGGG-SFKNQFKRA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           D+     A++ G  E     + +K L                     AQ T+  ++LV  
Sbjct: 373 DKSAAAFALVLGEDEMRDDSISLKPLRS-----------------DDAQQTVAQADLVRL 415

Query: 485 VKK 487
           ++ 
Sbjct: 416 IQS 418


>gi|325925139|ref|ZP_08186552.1| histidyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325544393|gb|EGD15763.1| histidyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 482

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 140/515 (27%), Positives = 226/515 (43%), Gaps = 73/515 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQDDDGQ-----------------WISLRYDLTAPLARYVAENFDTIVFPCRT 108
               V+ +Q                       ++LR+DLT PLARYVAE+   + FP R 
Sbjct: 62  ---QVYFVQSTGALANAAAAADAGAENGGLPELALRFDLTVPLARYVAEHEHELSFPFRR 118

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ + 
Sbjct: 119 YQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQ 178

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           +NNRK+L G  E +G+   ++   + +VLR +DKLDK   + V+  L             
Sbjct: 179 LNNRKLLRGFFESLGVVDAEQ---QALVLREVDKLDKRSAEDVRATL----------MGP 225

Query: 229 GANLTSEQIDIMVSFLSIDLEKS----------MHELYELVKGTIAGEKGFNELVVISEL 278
              L  + +  ++ F  I               ++E+     G      G ++L  + EL
Sbjct: 226 DFGLAEDAVRRILDFAKIRSVSHADALDKIDWVVNEVQSRSGGNEDLHAGADDLREVLEL 285

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
           V+  G   +   ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L 
Sbjct: 286 VKALGVPESAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYESLA 337

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           S +    +P  G SIG++RL   L+         +     ++  M  D   L       +
Sbjct: 338 SHYTKSKLPGVGISIGLTRLFWQLREAGLIQGIAESSVQAMVALM--DETRLDDALDIAR 395

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            LR  GI  E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL   ++   
Sbjct: 396 RLRIGGINTEVQM-EPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ--- 450

Query: 459 EIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                         Q  +   EL ST++  L++ +
Sbjct: 451 --------------QFDVARDELASTLQVELEQAR 471


>gi|254820463|ref|ZP_05225464.1| histidyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 420

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 93/472 (19%), Positives = 176/472 (37%), Gaps = 68/472 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              P+G  D    +      + D +       G+  IE P+ E +    + + +  D  +
Sbjct: 4   FSAPKGVPDYVPPDSAQFVAVRDGLLGAARRAGYGDIELPIFEDTALFARGVGESTDVVS 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+R
Sbjct: 64  KEMYTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGALPVKLCYAGPFFRYERPQAGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  V+ +G      DAE+  +      ++G            D       R++L   
Sbjct: 124 QLQQVGVEAIGVDDPALDAEVIAVADAGFRSLGLDGFRLEITSLGDDSCRPAYRELLQEF 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  + L  + +    +  LR +D         V+ +  +                     
Sbjct: 184 LFGLSLDDETRRRAEINPLRVLDDKRP----EVRAMTAD-------------------AP 220

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +++  LS                    +        +   +   G       I+  +VRG
Sbjct: 221 VLLDHLS--------------------DAAKQHFDTVLAHLDALGVP---YVINPRMVRG 257

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E +                 +GGGGRYDGL+    GQ++   GF +G+ R 
Sbjct: 258 LDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMRELGGQDLSGIGFGLGVDRT 309

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++   S           +  +     +  +  +    LR+AG+R ++  G  +   
Sbjct: 310 LLALRAEGKSVGTAARCE---VFGVPLSEQAKLRLAVLAGQLRSAGVRVDLAYG-DRGLK 365

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             ++ ADR    +A++ G  +   G + +KDL  G++ +   +   +   AR
Sbjct: 366 GAMRAADRSGARVALVLGDRDIEAGTVGVKDLGTGEQSAVASETVVADVLAR 417


>gi|146283360|ref|YP_001173513.1| histidyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166228600|sp|A4VNX0|SYH_PSEU5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|145571565|gb|ABP80671.1| histidyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 429

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 104/488 (21%), Positives = 184/488 (37%), Gaps = 73/488 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +      +  +   + E+YG+  I  P+LE++D   + +
Sbjct: 1   MSKS----LQAIRGMNDILPAQTPTWRYLESTFAQLLESYGYSEIRLPILEFTDLFARGI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D  +K +++  D + + ++LR + TA   R V E+  T      + +  GP+FR E
Sbjct: 57  GEGTDVVDKEMYTFLDRNEESLTLRPEGTAGCVRAVLEHGMTGGGQVQKLWYTGPMFRYE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           K   GR+RQF Q  V+         DAE+ ++ A   + +G                   
Sbjct: 117 KPQKGRYRQFHQIGVEVFNQPGPDIDAELIVLTARLWKQLGLADAVTLQLNSLGSSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L++     D+            D   +     +++L  +       +    
Sbjct: 177 RYRDALVAYLQQRFEQLDE------------DSQRRLTTNPLRILDSK-------NAQTQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A LT      +  +L  +       L   +                              
Sbjct: 218 ALLTD--APTLHDYLDEESRAHFEGLKARLDA-----------------------VGIAY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I+  +VRGL+YY   V+E +          K    G+V  GGRYDGLVS+F G+  P  
Sbjct: 253 EINPKLVRGLDYYGRTVFEWVT--------DKLGAQGTVCAGGRYDGLVSQFGGKPTPGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++G+ RL++ L++L      +       I      ++  +      + LR    G+R 
Sbjct: 305 GFAMGVERLVLLLETLGLVPETLNPAPHAYICAFGEAAELAALALA--ERLRDELPGLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
            +  G   +F +Q K AD+     A+I G  E +  ++  K L    ++ S         
Sbjct: 363 LVNAGGG-SFKSQFKKADKSGARYALILGDDELAGRVVGCKPLRDDSEQQSIAWDALPER 421

Query: 467 REARVAQI 474
             A + Q+
Sbjct: 422 LAACLEQV 429


>gi|260583855|ref|ZP_05851603.1| histidine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158481|gb|EEW93549.1| histidine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 438

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 97/474 (20%), Positives = 186/474 (39%), Gaps = 52/474 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + P+G AD   +EI+I + I ++ R I  +Y F+ + TP+ E  +   + + D  D  +
Sbjct: 2   IQKPKGTADLLPEEIKIWHYIEETARIILGDYQFEEMRTPMFESYELFSRGVGDTSDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGR 124
           K ++   D   + I+LR + TA + R   EN         P + Y + P+FR E+   GR
Sbjct: 62  KEMYDFYDKGDRHITLRPEGTAAIVRAYVENKLFGPEHKKPYKVYYMAPMFRYERPQSGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK-ILDGILEKIG 183
            RQF Q  V+  GS+    D E   M  D L+ +G+      I    +        + + 
Sbjct: 122 LRQFHQLGVEVFGSTNPATDVETIAMAWDLLKELGLSNMRLVINSLGKTADRIAYRQALI 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            + +    E      + D  ++     +++L  + + D             +    ++ F
Sbjct: 182 DYLEPFTEEL-----SEDSKNRLHKNPLRVLDSKDKRDIE---------IVKNAPRILEF 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS +      ++ + +       +    +                       VRGL+YY 
Sbjct: 228 LSDEARTHFEKVQQYLTALEIPFEIDETM-----------------------VRGLDYYQ 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             ++E +        K       ++ GGGRYDGLV    G   P  GF +G+ RL++ +K
Sbjct: 265 DTIFEIMTDSKSFGAK------TTICGGGRYDGLVQELDGPETPGFGFGLGMERLVLLMK 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             +    +++E+       +    ++  +    +  LR  G   +      +    Q K 
Sbjct: 319 DEQVEIPDLQELDA---YIVGLGEETEEEVLKLSISLRQQGYSVDRDFF-GRKAKPQFKN 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           A +    + I  G  E +   + +K +  GKE+  ++ +     ++   Q T+ 
Sbjct: 375 AQKYGAKVVITLGEEELASRQVPLKVMNTGKEVKVDLADVYEDFDSLFRQATMD 428


>gi|288941007|ref|YP_003443247.1| histidyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896379|gb|ADC62215.1| histidyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 420

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 105/474 (22%), Positives = 185/474 (39%), Gaps = 61/474 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   + I I +RI ++ R +   YG+  I TPL+E ++   + +
Sbjct: 1   MSKY----IQAIRGMHDILPERIAIWHRIEEAAREVLAGYGYSEIRTPLVEVTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K ++S  D  G  +SLR + TA   R   E+   +V P R +  GP+FR E+
Sbjct: 57  GEVTDIVEKEMYSFADRHGDSLSLRPEGTASCVRAAIEHGL-LVQPQRLWYQGPMFRYER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    D E+ ++ A     +G+      I          + 
Sbjct: 116 PQRGRYRQFHQIGVEAFGLAGPDIDVEVILLTARLWRRLGLDSFRLEINTLGDSAERQVY 175

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +  +       ++L      D   +     +++L  +     +      A    + +  
Sbjct: 176 RERLVDYLQARADQLD----ADSQRRLSTNPLRILDSKH--PETQRLLVDAPSLMDVL-- 227

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                                    GE+       +   +  +G +    +I+  +VRGL
Sbjct: 228 -------------------------GEETRAHFERLRAGLDAAGID---YQINPRLVRGL 259

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E I         +     G+V  GGRYDGLV +  G+  PA GF++G+ RL+
Sbjct: 260 DYYNRTVFEWIT--------EDLGAQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLV 311

Query: 360 VALKSLESSTNNIKEMGPVLI--TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
             L+    +     +   V +             + +     LR          G   +F
Sbjct: 312 EILEQSGFAPERRLDAYLVAVGERAEAAAPALAERLRDALPRLRLQ------SNGGGGSF 365

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREA 469
            +Q K AD+     A+I G  E  RG++ +KDL  G+  +     ++  ++   
Sbjct: 366 KSQFKKADKSGARFALILGDEELERGVIGVKDLR-GESGQRELRHEDVAAFLTE 418


>gi|74008962|ref|XP_854376.1| PREDICTED: similar to Histidyl-tRNA synthetase (Histidine--tRNA
           ligase) (HisRS) [Canis familiaris]
          Length = 618

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 98/476 (20%), Positives = 186/476 (39%), Gaps = 66/476 (13%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           +K K   + P+G  D   +++ +R ++ D I + ++ +G +  +TP+ E  ++L     +
Sbjct: 70  RKQKFVLKTPKGTRDYSPQQMAVREKVFDVIISCFKRHGAEITDTPVFELKETLTGKYGE 129

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +   +K ++ L+D  G+ +SL YDLT P ARY+A N  T + P    ++     N     
Sbjct: 130 D---SKLIYDLKDQGGELLSLCYDLTVPFARYLAMNKLTNIKPYHIAKVYW-CDNPAMTR 185

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           G++R+F QC  D  G          C+ +   +    ++  D+ + +N+R ILDGI +  
Sbjct: 186 GQYREFYQCYFDIAGQFDPMITDAECLEIMSEILR-SLQIGDFLVKVNDRHILDGIGQV- 243

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                                 +   + VK            +      L ++  D +  
Sbjct: 244 ---------------------GQVSWEEVK-----------NEMVGEKGLATKVPDHIGD 271

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++      S+ E       +       +G  +L ++ E +                    
Sbjct: 272 YIQQHGGISLVEQLLQDPELSQNKQALEGLGDLKLLFEYLTLFSIADK------------ 319

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISR 357
                      + F +    ++P+  G+V   GRYDGLV  F      VP  G SIG+ R
Sbjct: 320 -----------ISFDLSLAGEEPLGVGNVAAEGRYDGLVGMFDPKGCKVPCVGLSIGVER 368

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +   ++    +T          +         L +       L  AGI+AE+    +   
Sbjct: 369 IFSIVEQRLEATEEKVRTTETQVLAASAQKKLLEERLKLVSELWNAGIKAELLYKKNAKL 428

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            NQL+Y +    PL  I G  E   G+++++ +A  +E+    ++     + R +Q
Sbjct: 429 QNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEVDVPREDLVEEIKRRTSQ 484


>gi|333028341|ref|ZP_08456405.1| putative histidyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332748193|gb|EGJ78634.1| putative histidyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 420

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 95/493 (19%), Positives = 181/493 (36%), Gaps = 87/493 (17%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + ++I     + G+  IETP  E      + + +  D  
Sbjct: 3   TFKAPKGTYDLLPPDSGRFLAVREAIAAPLRDAGYGYIETPGFEDVRLFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGR 124
           +K ++      G  ++LR + TA + R V E+            +  G  +R E+   GR
Sbjct: 63  SKEMYVFTTKGGDELALRPEGTAAVLRAVLESNLHKTGNLPVKVWYSGSQYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G+ R         D       R  L 
Sbjct: 123 YRHFSQVGAEAIGAEDPLLDAELIILADQAYRSLGLTRHRILLNSLGDATCRPVYRAALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  + +    +  LR +D         V+  L                     
Sbjct: 183 DFLRALDLDEETRRRVEINPLRVLDDKRP----EVRDQLT-------------------G 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+  L+ G                          R +    +V
Sbjct: 220 APLLADYLCDACKAYHEEVRALLDGA-----------------------GVRYEDDPKLV 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMLGGPELPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     +         +  +     +          LR +GI  ++  G  + 
Sbjct: 309 RTVLALEAEGVVLDLPP---VTSVYAIPLGEAARRALFEKVTELRRSGIATDLSFG-GRG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
               +K A+R    LA+I G  +   G +Q+KDL  G++ +                  +
Sbjct: 365 LKGAMKSANRSGARLALIAGERDLVDGSVQLKDLESGEQHA------------------V 406

Query: 477 PISELVSTVKKIL 489
           P+++ V+ ++++L
Sbjct: 407 PLAQAVAEIQRLL 419


>gi|33602151|ref|NP_889711.1| histidyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|39932137|sp|Q7WHN1|SYH_BORBR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|46397794|sp|Q7W6P7|SYH_BORPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|33576589|emb|CAE33667.1| histidyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 428

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 103/482 (21%), Positives = 188/482 (39%), Gaps = 64/482 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    RG  D          +  + +R    +YG+  + TP+LE++    + + +  D  
Sbjct: 7   KVSAIRGMNDVLPGPSARWEKFEEIVRGWLRSYGYRNVRTPVLEHTRLFARGIGEVTDIV 66

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D  +G  +++R ++TA + R   E+      P R Y IGPVFR+E+   GR+
Sbjct: 67  EKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHERPQRGRY 126

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q DV+ +G +    DAEM +M+A   + +G++     +    +           + 
Sbjct: 127 RQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAAHRAALIE 186

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             ++  + L      D   +     +++L  +                 +    +  FL 
Sbjct: 187 HLERHQDILD----EDGRRRMYSNPLRVLDTKNPAMQEMA---------DSAPRLFDFLG 233

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +       L + +                              +++  +VRGL+YY   
Sbjct: 234 EESRSHFDGLCQRLADA-----------------------GIEYRLNPRLVRGLDYYNLT 270

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G+V GGGRYDGLV    G+  PA GF+IG+ RL+   +  
Sbjct: 271 VFEWVT--------DRLGAQGTVCGGGRYDGLVELLGGKPAPAVGFAIGMERLLDLWEQ- 321

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +  I++     +  +    +         + LR AG+   +  G++  F  Q K AD
Sbjct: 322 ---SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDAGLDVIVHAGAAG-FKAQFKRAD 377

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                +A+I G  E +     IK L                  A  AQ  +P+++L   +
Sbjct: 378 ASGARIAVILGGDEVASRTASIKHLR-------------GPVGADAAQQQVPLAQLADVL 424

Query: 486 KK 487
           K 
Sbjct: 425 KS 426


>gi|148643241|ref|YP_001273754.1| histidyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|261349966|ref|ZP_05975383.1| histidine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|148552258|gb|ABQ87386.1| histidyl-tRNA synthetase, HisS [Methanobrevibacter smithii ATCC
           35061]
 gi|288860749|gb|EFC93047.1| histidine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 431

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 111/468 (23%), Positives = 200/468 (42%), Gaps = 43/468 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRG  D    E+R R +    +RN++ENY +  I+TPL E          +E   
Sbjct: 1   MEFTRPRGTRDFLFDEMRERKKAESILRNVFENYAYQEIKTPLFEELKLFTTKSGEEIVD 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRF 125
              +++ +D   + ++LR ++TAP+AR            P + Y  G  FR E+   GRF
Sbjct: 61  --QLYNFKDKSDRELTLRPEITAPVARLYLNELQKTASKPIKLYYYGSCFRYERPQKGRF 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +G+ +   +AE+  M ++++E +GI   D  + IN+  I+ G+ +   + 
Sbjct: 119 RQFWQFGCELIGAKSPQGEAEVIAMCSESIEKLGIPGAD--VNINHLGIIRGLFKHFNID 176

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI---MVS 242
              +                     V +++ +G  D   +   G N   +  ++   +  
Sbjct: 177 TATQR-------------------EVMVVIDKGDKDLLKESLTGENPIIDNEELNHVLFK 217

Query: 243 FLSIDLEKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            + +  +KS + ++ ELV          NEL  + + +           ++  + RGL+Y
Sbjct: 218 LIDMVGDKSIIKDIEELVAPYPESHDALNELEELIDTLASFKM--ENYTLNLGVARGLDY 275

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG V+E  +                V GGG Y  L+  F G+ V +TGF+ G  RL+ A
Sbjct: 276 YTGIVFEVYIPS--------LGAQKQVCGGGTYS-LIKIFGGEEVVSTGFAFGFDRLMNA 326

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++ L       +   P+ I       D   K    TQ LR+AGI  ++ L + K F   +
Sbjct: 327 IEEL---ATPEELPCPIDIYVAPISDDVRLKAYEITQTLRSAGIACDVDL-NGKKFKKIM 382

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +A++       I G  +     + IK++  G +   ++ N   + + 
Sbjct: 383 NHANKIKVKQVAIIGAKDLENNQITIKNMESGNQELVDLDNVVEYIKG 430


>gi|1841704|emb|CAB06653.1| histidyl tRNA Synthetase [Oryza sativa Japonica Group]
          Length = 494

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 128/468 (27%), Positives = 206/468 (44%), Gaps = 42/468 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            ++P+G  D   +++ IR      I  +++ +G   ++TP+ E  ++L GK+  D    +
Sbjct: 59  PKIPKGTRDFGKEQMAIREHAFSIITGVFKMHGAVSLDTPVFELRETLMGKYGED----S 114

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+
Sbjct: 115 KLIYDLADQGGELCSLRYDLTVPFARYVAMNN---ISSLKRYQIAKVYRRDNPSKGRYRE 171

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G           + +   L    +    Y I +N+RK+LDG+LE  G+  +
Sbjct: 172 FYQCDFDIAGVYETMEPDFEVIKVLTELLD-QLDIGTYEIKLNHRKLLDGMLEICGVPPE 230

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +   V  +IDKLDK   + VK  L +              +++E  D +   +   
Sbjct: 231 ----KFRTVCSSIDKLDKQTFEQVKKELVDE-----------KGISNETADKIGDLVKTR 275

Query: 248 LEK-----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                    + +      G        NEL ++ + + K      +I    ++ RGL+YY
Sbjct: 276 GPPLEVLLELRKEGSKFMGNAGSVTALNELEILFKALDK-ANAIGKIVFDLSLARGLDYY 334

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YEA+               GS+  GGRYD LV  F G+ VPA G S+GI R+   +
Sbjct: 335 TGVIYEAVFKGTT--------QVGSIAAGGRYDNLVGMFSGKQVPAVGVSLGIERVFAIM 386

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E    N        +       D +         L  AGI+AE  L +     N LK
Sbjct: 387 EQQE-MEKNQIRATETEVLVSIIGKDLILAA-ELVSELWNAGIKAEFKLTTR--IQNHLK 442

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           YA +   P  ++ G  E S G +++K+LA  +E   +        + +
Sbjct: 443 YATQSGIPWMVLVGESEISSGKVKLKNLAASQEEEVDRTEFAQVLKQK 490


>gi|18310916|ref|NP_562850.1| histidyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|32130127|sp|Q8XJ27|SYH_CLOPE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|18145598|dbj|BAB81640.1| histidine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 415

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 97/462 (20%), Positives = 170/462 (36%), Gaps = 57/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  +G  D    +    + I + +R I   YG   I TP+ E ++   + + +  D 
Sbjct: 1   MAIQAQKGTKDMLPNDAYKWHYIEEKLRKISAEYGIREIRTPMFEATELFKRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + TAP  R   EN       P + +   P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGGRSITLKPEGTAPAVRAFIENSLYADAQPTKMFYFTPCFRYEKMQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKI 182
            R+F Q  ++  GS   + DAE+  ++   L      +        +   K      E +
Sbjct: 121 LREFHQYGIEVFGSQEASIDAEILSLVMRALTEDFGIKGLSLNINSLGCPKCRAKFNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             +  +  +             K   +   + + + +     +  K A    + I     
Sbjct: 181 KQYLKENYDNLCETC-------KTRFEKNPMRIIDCKEKRCKEIVKEAPSILDYI----- 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                  E+  +    +   +   G       I   IVRGL+YY
Sbjct: 229 ----------------------CEECSDHFSKLKAYLDVMG---IEYNIDPQIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E I                +V GGGRYD LV    G   PA GF +G+ RL++ L
Sbjct: 264 SKTVFEVIKDGL------------TVCGGGRYDYLVEEVDGPKTPAMGFGLGLERLLLIL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I E     +        +  +       LR +GI+AE+     K+   Q+K
Sbjct: 312 DEEGI---EIPEPVRCEVYIGSMGDRARLEAMKLAFNLRKSGIKAEIDH-LGKSVKAQMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           YA++       + G  E     ++IK ++ G++    +  NE
Sbjct: 368 YANKIGAKYTFVIGDSEIEENKIKIKRMSDGEQFEVSLDINE 409


>gi|149549491|ref|XP_001509382.1| PREDICTED: similar to Histidyl-tRNA synthetase-like, partial
           [Ornithorhynchus anatinus]
          Length = 464

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 109/472 (23%), Positives = 200/472 (42%), Gaps = 35/472 (7%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ + I + ++ +G + I+TP+ E  ++L     ++
Sbjct: 21  KQKFVLKTPKGTRDYSPRQMAVREKVFEEIISCFKRHGAEVIDTPVFELKETLTGKYGED 80

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ ++LRYDLT P ARY+A N  T +             N     G
Sbjct: 81  ---SKLIYDLKDQGGELLALRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 136

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G        +   +        G++  D+ I +    +L        
Sbjct: 137 RYREFYQCDFDIAGQFD-PMIPDAECLKIVCEILSGLQLGDFLIKVTALPLLPAAFAGCH 195

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                       +L A   L +  ++ + L    GR  +  +   G      +       
Sbjct: 196 FS-----QWEGNMLCASVVLPERLVRRLVLSSVPGRRADGAEARAGPGAGKGRASPADPL 250

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            +   E+ +  L EL                       + + S ++    ++ RGL+YYT
Sbjct: 251 PTTPGERPISGLPEL-----------------------TVFRSPQVSFDLSLARGLDYYT 287

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVA 361
           G +YEA+L  P   + ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+   
Sbjct: 288 GVIYEAVLVQPPATQGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFTI 347

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++    +++         +         L +       L  AGI+AE+   ++    NQL
Sbjct: 348 VEQRMEASDEKIRTTETQVLVAAAQKKLLKERLKLISELWDAGIKAELLYKTNPKLLNQL 407

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +Y +    PL  I G  E   G+++++ +A  +E++ + +      + R  Q
Sbjct: 408 QYCEETGIPLVAIVGEQELKDGVVKLRTVASREEVNVQREKLIEEIKRRTGQ 459


>gi|284054154|ref|ZP_06384364.1| histidyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 392

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 99/440 (22%), Positives = 171/440 (38%), Gaps = 54/440 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D   +E+     +            +  I TP+ E +    + + +  D   
Sbjct: 4   IQSLRGTRDILPEEVGYWQWVASVAEETLARGNYQEIRTPIFEPTALFERGIGEATDVVG 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + I+LR + TA + R   E          R + +GP+FR E+   GR R
Sbjct: 64  KEMYTFCDRGDRSITLRPEGTAGVVRAYIERKLHANPGVQRLWYMGPMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLH 185
           QF Q  V+ +GS    AD E+  +  D L+++GI     ++    +R       + +  +
Sbjct: 124 QFHQLGVEVLGSDDPRADVEVIAVAVDILKSLGITNLHLNLNSVGDRTDRQNYRQALVDY 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 E        D  D+     +++L  +   + + + T+ A         ++ +L 
Sbjct: 184 LTPFSGELD-----QDSRDRLTRNPMRILDSKD--ERTQEITRNA-------PSILDYLG 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              +     +  L+K                              ++  +VRGL+YYT  
Sbjct: 230 ERSQSHFERVQYLIKEL-----------------------GISYTLNPRLVRGLDYYTHT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E I                +V GGGRYDGLV    G +VPA G++IG+ RLI+ L+ L
Sbjct: 267 AFEII--------SDDLGAQATVCGGGRYDGLVQELGGPSVPAVGWAIGLERLIILLQQL 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                   +     +  +     + +   +  Q LR AG+R E+ L S   F  Q K AD
Sbjct: 319 HQPPQVTPQ-----LYLVSRGEKAEANGLILAQKLRQAGLRVELDL-SGSAFSKQFKRAD 372

Query: 426 RRNCPLAIIQGTGERSRGML 445
           R      ++ G  E   G +
Sbjct: 373 RSGAGACLVLGDAEAIAGTV 392


>gi|25028319|ref|NP_738373.1| histidyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259507374|ref|ZP_05750274.1| histidine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|32130111|sp|Q8FPL5|SYH_COREF RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|23493604|dbj|BAC18573.1| putative histidyl-tRNA synthetase [Corynebacterium efficiens
           YS-314]
 gi|259164999|gb|EEW49553.1| histidine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 429

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 100/487 (20%), Positives = 179/487 (36%), Gaps = 73/487 (14%)

Query: 1   MGKKT----KLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS 55
           M  K     K++    P+G  D           + D+        GF+ IE P+ E +  
Sbjct: 1   MTDKNTRTEKIQPFSAPKGVPDYAPPRSAAFVAVRDAFITQAHLAGFEHIELPIFEETGL 60

Query: 56  LGKFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGP 113
             + + +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP
Sbjct: 61  FARGVGESTDVVSKEMYTFADRGERSVTLRPEGTAGVMRAVIEHSLDRGQLPVKLNYAGP 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDY 165
            FR E+   GR+RQ  Q  V+ +G      DAE+  +   +  ++G            D 
Sbjct: 121 FFRYERPQAGRYRQLQQVGVEAIGVDDPALDAEIIALADRSYRSLGLTGFRLELTSLGDS 180

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
           +     R+ L   L  + L  + +    +  LR +D         V+ +  +        
Sbjct: 181 NCRPAYRQKLQDFLLNLPLDEETRRRAEINPLRVLDDK----RAEVREMTAD-------- 228

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
                        +M+  L          +  L+                          
Sbjct: 229 -----------APLMLDHLDDGCRTHFETVTGLLDD-----------------------M 254

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
               +I+  +VRGL+YYT   +E I                 +GGGGRYDGL+++  GQ+
Sbjct: 255 GVPYEINPRMVRGLDYYTKTTFEFI--------HDGLGAQSGIGGGGRYDGLMAQLGGQD 306

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +   G+ +G+ R I+AL++   +    +    V +  +     +          LR AGI
Sbjct: 307 LSGIGYGLGVDRTILALEAEGVTVGQERR---VDVYGVPLGQAAKKAMAGIINDLRAAGI 363

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+M  G  +     +K ADR      ++ G  E   G + +KD+    +    +    S
Sbjct: 364 SADMSYG-DRGLKGAMKGADRSGSLYTLVLGENELDNGTVAVKDMRAHDQQDIALSEVVS 422

Query: 466 WREARVA 472
              A++A
Sbjct: 423 ALRAKLA 429


>gi|332975402|gb|EGK12296.1| histidine--tRNA ligase [Desmospora sp. 8437]
          Length = 398

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 93/445 (20%), Positives = 165/445 (37%), Gaps = 58/445 (13%)

Query: 30  LDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGVFSLQDDDGQWISLRYDLT 88
            +  R +   Y F  I TPL E ++   + + +  D   K +++ +D  G+ ++LR + T
Sbjct: 1   EEKARELCRLYHFSEIRTPLFEQTELFRRGVGETTDIVEKEMYTFEDRGGRSLTLRPEGT 60

Query: 89  APLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM 147
           AP+ R   EN       P + Y +GP+FR E+   GR RQF Q  V+  G+     DAE+
Sbjct: 61  APVVRSFVENKMYAGPQPTKLYYMGPMFRYERPQAGRQRQFHQFGVEVFGTREPEVDAEI 120

Query: 148 CMMMADTLEAVGIKR----NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL 203
             +      AVG+++     +       R +    L K      ++L          D  
Sbjct: 121 IDLGYRFYTAVGLRKVRVELNSVGCPRCRPVHREALVKFLTPHREEL--------CKDCQ 172

Query: 204 DKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTI 263
            +     +++L  +  T          +  +E    M+ FL  D       + E +    
Sbjct: 173 SRLERNPMRVLDCKNET---------CSRLTEDAPKMLQFLCDDCAPHFDTVKENLDLLE 223

Query: 264 AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPV 323
              +    L                       VRGL+YYT   +E +L            
Sbjct: 224 VPYEVNPRL-----------------------VRGLDYYTQTAFEYLLEEAEGGSLGGGG 260

Query: 324 VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTM 383
            +  +                ++P  GF +G+ R+I+ALK  E +    +    V    +
Sbjct: 261 RYNGLVE--------EVGGPADMPGIGFGLGLERVILALKQQEVNPPIRR---GVDCFLV 309

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
              + +  +     + LR AG+ AE      +    QLK ADR       I G  E    
Sbjct: 310 TLGAATKKRGVSLLKQLREAGLSAERDY-LDRKLKAQLKAADRSGAAYVAILGEDELEED 368

Query: 444 MLQIKDLAKGKELSREIKNNESWRE 468
            + +K+L+ G++ + ++     +  
Sbjct: 369 RIVVKNLSTGEQETIQLDQLTDYIR 393


>gi|260072545|gb|ACX30445.1| histidyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 424

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 108/485 (22%), Positives = 201/485 (41%), Gaps = 75/485 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   K+  +   +   I N++ +YGF  I TP++E +D+  + + +  D  
Sbjct: 4   KIQAIRGMNDLLPKDSSLWLSVERIISNLFISYGFKNIRTPIVEKTDTFCRAIGEATDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S ++ +G+ +SLR + TA   R + E+        + +  G +FR+E+   GR+R
Sbjct: 64  EKEMYSWKESNGESLSLRPEGTAGCVRAMIEHNLPREGIQKVFYQGAMFRHERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEKI 182
           QF Q  V+  G+     DAE+  M     +++G+K     I        R     +L   
Sbjct: 124 QFHQVGVEVFGADNAKIDAELMAMTHALWQSLGLKNLTLQINTLGSSEARANYKSVLVDY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D+L+E        D L +     +++L  + +            L + +   +++
Sbjct: 184 FTKNKDQLDE--------DSLRRLSTNPLRILDSKNKDMQ--------GLIN-RAPKLMN 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  +  +   E    ++                       Y +   +I++ +VRGL+YY
Sbjct: 227 YLDDESSQHFDEFKNYLE-----------------------YLNIPYQINTRLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E                 G++  GGRYDGLV +  G+  PA GF+IG+ RL++ L
Sbjct: 264 NRTVFEWTTND--------LGAQGTICAGGRYDGLVEKMGGKPTPAVGFAIGLERLVLLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS-KNFGNQL 421
           +  + S        P+ I  M     +  K       LR +   A ++   +  +F +Q 
Sbjct: 316 EEQKISL----SGSPLSIYLMALGDKAQLKSMQIAHDLRASLPGAILYNDITLGSFKSQF 371

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K AD+ +   A+I G  E S   + +K L                   + +Q T+ + E 
Sbjct: 372 KKADKADADYALILGEEELSNNQISVKPLK-----------------GQSSQQTMSLDEA 414

Query: 482 VSTVK 486
           ++  K
Sbjct: 415 INYFK 419


>gi|213971517|ref|ZP_03399628.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|213923709|gb|EEB57293.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 429

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 101/485 (20%), Positives = 183/485 (37%), Gaps = 69/485 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E++D   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPVVEFTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +            
Sbjct: 177 RYRDALVEFLSAHLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRIHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ L++LE     I     V +      ++  +         R   +R ++
Sbjct: 305 GFAMGIERLVLLLETLEQVPEEIARQVDVYLCAFGEAAELAALALTEQVRDRLPDLRLQV 364

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWRE 468
             G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +           
Sbjct: 365 NAGAG-SFKSQFKKADKSGALYALILGEEELAAKIIGVKPLRGQGEQQNIAWDALSEHLA 423

Query: 469 ARVAQ 473
           + V Q
Sbjct: 424 SCVVQ 428


>gi|161350040|ref|NP_895731.2| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|46397792|sp|Q7V4P3|SYH_PROMM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
          Length = 436

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 92/451 (20%), Positives = 171/451 (37%), Gaps = 53/451 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   ++ R    +    R+ +   G   I TPLLE ++   + + +  D  
Sbjct: 3   QLQSLRGMVDLLPEQTRCWQAVESVARDHFRRAGLQEIRTPLLEVTELFARGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D   +  +LR + TA + R   ++      P R +  GP+FR E+   GR R
Sbjct: 63  GKEMYTFVDRGDRSCTLRPEGTASVVRAALQHGLLSQGPQRFWYGGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLH 185
           QF Q  V+ +G  +  +DAE+  +    L  +G++     I      +      E++   
Sbjct: 123 QFYQIGVEYLGVGSPRSDAEVIALAWALLVDLGVQGLVLEINSLGTLQDRQKYREELVAW 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + +  E        D   +     +++L  +                 +    +   LS
Sbjct: 183 LEARSEELD-----DDSRKRLYTNPLRILDSKHPAIKE---------LLQDAPTLFEALS 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           ++ +    E+   ++                             +++  +VRGL+YY   
Sbjct: 229 VESKARFEEVQVDLEAL-----------------------QIPFQLNPRLVRGLDYYGHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E            +     +V GGGRYDGLV +  G   PA G++ G+ RL++ L++ 
Sbjct: 266 AFEIT--------SDQLGAQATVCGGGRYDGLVEQLGGAPTPAFGWAFGMERLMLLLEAA 317

Query: 366 ESSTNNIK-----EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            S   +             +  ++    +     +    LR AG+  E+   S   F  Q
Sbjct: 318 ASINPSGSAARLRASTRPDLYVVNRGEQAERVALVIAHQLRAAGLVVELD-SSGAAFNKQ 376

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
            K A R     A++ G  E  RG  ++K L 
Sbjct: 377 FKRAGRSRATWALVIGDDEAERGEGRLKYLQ 407


>gi|206900708|ref|YP_002250689.1| histidyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|229558656|sp|B5YDT1|SYH_DICT6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|206739811|gb|ACI18869.1| histidyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 416

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 108/464 (23%), Positives = 181/464 (39%), Gaps = 55/464 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   +PRG  D    E    + I ++ RN++E Y ++ I TP+ E+++   K   +  D 
Sbjct: 1   MNLGIPRGVQDILPDETPFWHLIENTARNLFEKYNYEEIRTPIFEFTELFIKGTGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ QD  G+ ++LR + T  + R    N         + Y IGP+FR E+   GR
Sbjct: 61  VMKEMYTFQDKKGRSLTLRPEGTPGVIRAYLMNKVYATTPIWKVYYIGPMFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q  V+ +G      D E+  +  + L+ + ++  +  I                 
Sbjct: 121 YRQFHQLGVEVLGRKDPYIDFEIINLAIEFLKTLELENLEVEINSLGCTKCR---PAYRE 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +  ++   +L  ID  ++     +++L  +                 E     + FL
Sbjct: 178 ALKNYFSQYKDILSHID-QERLERNPLRILDSKDEKIIP---------LKENAPQPLDFL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +    ++   +K                             KIS  +VRGL+YYT 
Sbjct: 228 CDDCKNHFEKVLNYMKEADL-----------------------SFKISPKLVRGLDYYTR 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                  +V GGGRYD LV  + G + P  GF++GI RLI+ LK 
Sbjct: 265 TVFEITTTS--------LGAQNAVVGGGRYDNLVETYGGPSTPGLGFALGIERLILLLKQ 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-FLGSSKNFGNQLKY 423
                         LI         + K     + LRT   R EM       +   QLK+
Sbjct: 317 QNKIKIERPS----LIFIAIEKEKYVKKAMEIAKTLRT-NYRVEMGSPEE--SLRTQLKW 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           AD+ N    I          +L+IK+   G+E   +IK+ +  +
Sbjct: 370 ADKLNSDYVIFV-NQGIENNILKIKNFKTGEEKEIKIKDIKELQ 412


>gi|302845602|ref|XP_002954339.1| hypothetical protein VOLCADRAFT_64783 [Volvox carteri f.
           nagariensis]
 gi|300260269|gb|EFJ44489.1| hypothetical protein VOLCADRAFT_64783 [Volvox carteri f.
           nagariensis]
          Length = 454

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 119/451 (26%), Positives = 209/451 (46%), Gaps = 44/451 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           + ++P+G  D   +++ IR +    I ++++ +G   I+TP+ E  ++L GK+  D    
Sbjct: 17  KPKIPKGTRDFLPEQMAIREKAFAIIVSVFKKHGAVAIDTPVFELRETLMGKYGED---- 72

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGR 124
           +K ++ L D  G+ +SLRYDLT P AR+VA +    +   + Y IG V+R ++     GR
Sbjct: 73  SKLIYDLADQGGEILSLRYDLTVPFARFVAVHS---IGNIKRYHIGKVYRRDQPQMTRGR 129

Query: 125 FRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           FR+F QCD D     +   ADAE+  ++ + L  +  +   + + IN+R +LD +L   G
Sbjct: 130 FREFFQCDFDIAGAYAPMVADAEIIKVLTEILTDL--QLGKFEVKINHRGLLDAMLAIAG 187

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  AIDKLDK   + V+            +      L  E  D +  F
Sbjct: 188 VPP----QKFRPICSAIDKLDKEPWEIVR-----------QEMVVDKGLPEEVADAIGRF 232

Query: 244 LSIDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + +  E     + +      +     G+   ++L  +  +++  G     + +  ++ RG
Sbjct: 233 VVLRGEPLELVQQLLAPDHPLSQNPMGKAALDDLAAMFNMLQAMG-ALGSLTLDLSLARG 291

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG +YEA+L              GS+  GGRYD LV  F G++VPA G SIGI R+
Sbjct: 292 LDYYTGVIYEAVL---------HGANVGSIAAGGRYDKLVGMFSGKDVPAVGVSIGIERV 342

Query: 359 IVALKSLESSTNNIK-EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
              ++   ++ +          +      +    +       L  AGIRAE     +   
Sbjct: 343 FAIMEQQRAAASGRPVRAIETEVLVASIGNGLQVRRMELCASLWAAGIRAEFGYKPNPKM 402

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            + L +      P  ++ G  E +RG+++IK
Sbjct: 403 ADNLGFCHENAVPYMVLFGEDELTRGVVKIK 433


>gi|183982141|ref|YP_001850432.1| histidyl-tRNA synthetase HisS [Mycobacterium marinum M]
 gi|229558696|sp|B2HN79|SYH_MYCMM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|183175467|gb|ACC40577.1| histidyl-tRNA synthetase HisS [Mycobacterium marinum M]
          Length = 420

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 93/464 (20%), Positives = 173/464 (37%), Gaps = 68/464 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  D    +      + D +       G+  IE P+ E +    + + +  D  +K +
Sbjct: 7   PKGVPDYVPPDSAQFVAVRDGLLTAARRAGYGHIELPIFEDTALFARGVGESTDVVSKEM 66

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+RQ  
Sbjct: 67  YTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGALPVKLCYAGPFFRYERPQAGRYRQLQ 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEK 181
           Q  V+ +G      DAE+  +      ++G            D       R++L   L  
Sbjct: 127 QVGVEAIGVDDPALDAEVIAIADAGFRSLGLDGFRLEVTSLGDETCRPQYRELLQEFLFG 186

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + L  D +    L  LR +D         V+ +  E                     +++
Sbjct: 187 LDLDDDTRRRAALNPLRVLDDKRP----EVRAMTAE-------------------APVLL 223

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             LS   ++    +   +                               I+  +VRGL+Y
Sbjct: 224 DHLSDVAKQHFDTVLAHLDAL-----------------------RVPYVINPRMVRGLDY 260

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E +                 +GGGGRYDGL+ +  GQ++   GF +G+ R ++A
Sbjct: 261 YTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMKQLGGQDLSGIGFGLGVDRTMLA 312

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L++   S           +  +     +     +    LR +G+R ++  G  +     +
Sbjct: 313 LRAEGKSVGESARCD---VFGVPLSEQAKLTLAVLAGQLRASGVRVDLAYG-DRGLKGAM 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           + ADR    +A++ G  +   G + +KDL  G+++S    +   
Sbjct: 369 RAADRSGARVALVAGDRDIEAGTVGVKDLGTGEQVSVSTDSVVD 412


>gi|326382138|ref|ZP_08203830.1| histidyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198868|gb|EGD56050.1| histidyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 423

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 93/463 (20%), Positives = 173/463 (37%), Gaps = 69/463 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  D           + +++       G+  IE P+ E +    + + +  D  +K +
Sbjct: 8   PKGIPDYFPPASADFLAVRNALTGAAHRAGYGHIELPIFEDTALFARGVGESTDVVSKEM 67

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D  G+ ++LR + TA + R V ++       P +    GP FR E+   GR+RQ  
Sbjct: 68  YTFADRGGRSVTLRPEGTAGVMRAVIQHGLDRGQLPVKLCYAGPFFRYERPQAGRYRQLQ 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEK 181
           Q  ++ +G      DAE+  +  +  + +G            D       R+ L   L  
Sbjct: 128 QVGIEAIGVDDPALDAEVIAVADEGYKRLGLSGYRLELTSLGDDTCRPQYREALQQFLFG 187

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + L    +    +  LR +D                       + T  A L  + +    
Sbjct: 188 LDLDDATRARAEINPLRVLDDK----------------RPEIKEATVNAPLMLDHLS--- 228

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                                   E   +    +   + + G +     I+  +VRGL+Y
Sbjct: 229 ------------------------ESARDHFEQVRSHLDRLGVD---YVINPRLVRGLDY 261

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIV 360
           YT   +E +                 +GGGGRYDGL+ +    Q +   GF IG+ R ++
Sbjct: 262 YTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMRQIGGKQELSGIGFGIGVDRTVL 313

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL++      ++   G V +  +     + S+       LR AG+  ++  G  +     
Sbjct: 314 ALEAEGV---SVAGEGRVQVFGVPLGVAAKSELVAVAAQLRAAGVSVDLAYG-DRGLKGA 369

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +K ADR    LA++ G  E     +++KDL+ G++    +   
Sbjct: 370 MKAADRSGARLALVLGDRELEERTIELKDLSNGEQRKVSLDEV 412


>gi|321455063|gb|EFX66208.1| hypothetical protein DAPPUDRAFT_219129 [Daphnia pulex]
          Length = 525

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 112/488 (22%), Positives = 207/488 (42%), Gaps = 44/488 (9%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           K   +  +G  D   +++ IR +  D I   ++ +G + ++TP+ E  + L     ++  
Sbjct: 57  KFVLKTAKGTRDFNPRQMVIRQQAFDKIIACFKRHGAETLDTPVFELKEVLTGKYGED-- 114

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +K ++ L D  G+ +SLRYDLT P AR++A N    +   +         N     GRF
Sbjct: 115 -SKLIYDLADQGGEILSLRYDLTVPFARFLAMNKVGSIKRYQLG-KVYRRDNPAMTKGRF 172

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F QCD D  G +        C+ +   +    +  +++ + IN+RKILDG+ E  G+ 
Sbjct: 173 REFFQCDFDIAGPTDPMIPDVECVRVVTEILD-SLDLSEHIVKINHRKILDGLFEACGVP 231

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 +   +  ++DKLDK   + V+  + +              L  E+ D +  ++ 
Sbjct: 232 D----TQFRAICSSVDKLDKSPWEEVRKEMTDE-----------KGLAPEKADQIGQYVL 276

Query: 246 IDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
              +  + E       +  + +  +G   L +        G    R+K   ++ RGL+YY
Sbjct: 277 RSGQDDLVEQLLADPKLSLSKSAIEGLEALKLFFRYAELYGVKK-RVKFDMSLARGLDYY 335

Query: 303 TGCVYEAILGFPVMN----------------EKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
           TG +YEA+L   +                  ++      GS+ GGGRYD LV+ F  +  
Sbjct: 336 TGIIYEAVLTSILYIFLYIKRQSYFISIFLLDQNPEEGVGSIAGGGRYDNLVALFDPKAK 395

Query: 347 --PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             P  G SIGI R++  L++ E++           +       + L +       L    
Sbjct: 396 AVPCVGVSIGIERILAILENREANLKL--RTVETQVYVAAAQKNLLEERMKICAELWDKE 453

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I+ EM   ++     QL+  + +  P AII G  E  +G+++++ +   +E   E     
Sbjct: 454 IKTEMSYKANPKLLGQLQTCEEQGIPWAIIIGQSELEKGVVKLRHVPSRQEEEIERSKLT 513

Query: 465 SWREARVA 472
              + ++ 
Sbjct: 514 DVLKHKLN 521


>gi|118466054|ref|YP_882642.1| histidyl-tRNA synthetase [Mycobacterium avium 104]
 gi|254775907|ref|ZP_05217423.1| histidyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|118167341|gb|ABK68238.1| histidyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 420

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 95/476 (19%), Positives = 183/476 (38%), Gaps = 68/476 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
                P+G  D    +      +   + +     G+  IE P+ E +    + + +  D 
Sbjct: 2   PEFSAPKGVPDYVPPDSAQFVAVRSGLLDAARGAGYGDIELPIFEDTALFARGVGESTDV 61

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
            +K +++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR
Sbjct: 62  VSKEMYTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGTLPVKLCYAGPFFRYERPQAGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILD 176
           +RQ  Q  V+ +G      DAE+  +      ++G            D       R++L 
Sbjct: 122 YRQLQQVGVEAIGVDDPALDAEVIAVADAGFRSLGLDGFRLEITSLGDDSCRPQYRELLQ 181

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  + +   RL  LR +D         V+ +  +                   
Sbjct: 182 DFLFGLDLDEETRRRARLNPLRVLDDKRP----EVRAMTAD------------------- 218

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             +++  LS                    +        +   +   G       I+  +V
Sbjct: 219 APVLLDHLS--------------------DAAKQHFDTVLAHLDALGVP---YVINPRMV 255

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                 +GGGGRYDGL+ +  GQ++   GF +G+ 
Sbjct: 256 RGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMRQLGGQDLSGIGFGLGVD 307

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++   S  +        +  +     +  +  +    LR AG+R +M  G ++ 
Sbjct: 308 RTLLALRAEGKSVGSAARCD---VFGVPLSDQAKLRLAVLAAGLRAAGVRVDMAYG-ARG 363

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               ++ ADR    +A++ G  +   G + +KDL  G ++S E+ +  +   ++++
Sbjct: 364 LKGAMRAADRSGARIALVLGDRDIDAGTVGVKDLQTGSQVSVELDSVVAEVLSQLS 419


>gi|332297974|ref|YP_004439896.1| Histidyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332181077|gb|AEE16765.1| Histidyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 435

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 130/451 (28%), Positives = 213/451 (47%), Gaps = 35/451 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ ++ +GF D   +    R+ +++ +   + ++G+ PI+TP+LEY++ L +    E   
Sbjct: 5   IQPKVLKGFRDFLPEAEITRSALIEKLTAAFRSFGYVPIDTPVLEYAEILLRKSSGE--T 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K VF  +D+ G+ ++LR+DLT P AR+ AE+ D + FP + Y I  V+R EK   GR+R
Sbjct: 63  EKQVFRFEDNGGRDVALRFDLTVPFARFTAEHKDELYFPFKRYHIAKVWRGEKPQAGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+QCD D VGS +   D E+  +M   L  +G+   D  I +++R + +  L   GL  
Sbjct: 123 EFVQCDFDCVGSDSAACDFEILALMKTALSVIGV--EDVTIRMSHRGVFNRFLANRGLTE 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +      +LR +DKL K G   V   L +         T  A L  + +  +   +  
Sbjct: 181 KSE-----DILRTVDKLAKIGRDEVIAQLTDS--------TGSAVLAEDIVSYIG--MEA 225

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             E ++  + ++  G          L  I  ++  +G  ++   +  +I RGL+YYTG V
Sbjct: 226 TFEATLAHMEKMAGGEADD---TRRLRDIRAMMEAAGI-ADSFVLDPSITRGLDYYTGVV 281

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           YE  L              GSV  GGRYD L   +    VP  G SIG+ RLI  L  L 
Sbjct: 282 YETFLNA--------LPSIGSVCSGGRYDNLAGLYMKDRVPGVGSSIGLDRLIAGLDQLG 333

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +  +       V       D+   + YQ     LR AGI  E+F   +K  G Q   A++
Sbjct: 334 ALEHKKS---YVQAEIFCLDAALAAHYQKVASQLRAAGIACEVFPD-AKKIGAQYAVAEK 389

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           +  P  I+    +  R +L +K+L   ++  
Sbjct: 390 KGVPFGILIKPEDAERNVLTLKNLTTREQFD 420


>gi|320032200|gb|EFW14155.1| histidyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 590

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 127/535 (23%), Positives = 220/535 (41%), Gaps = 76/535 (14%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M K       + P+G  D    +  +R+RI  +I N+++ +G   ++TP+ E  + L   
Sbjct: 68  MPKDKVTFNLKTPKGTKDWAGPDALLRDRIFSTITNVFKRHGGTALDTPVFELREILAGK 127

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N D  V   + Y I  V+R ++
Sbjct: 128 YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPD--VRSIKRYHIAKVYRRDQ 182

Query: 120 H----GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
                G  R       D+      A   DAE+  ++++  E +G  + +Y I IN+RKIL
Sbjct: 183 PAMTKGRMREFYQCDFDIAGANFDAMVPDAEILRIISEVFEDLG-WKGNYLIKINHRKIL 241

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           DG+ E  G+  +    +   +  A+DKLDK     V+  + +              L   
Sbjct: 242 DGVFEVCGVPKE----KIRTISSAVDKLDKLPWADVRKEMVDE-----------KGLDPA 286

Query: 236 QIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             D + +++     + + +     E++ G  + + G  E+ ++ + ++      ++I   
Sbjct: 287 VADKIETYVVRKGGRELLDSLKSDEMLVGNSSAKTGLEEMGLLMDYLQAFNIL-DKISFD 345

Query: 293 STIVRGLEYYTGCVYEAI----------------------------LGFPVMNEKQKPVV 324
            ++ RGL+YYTG +YE +                            +           V 
Sbjct: 346 MSLARGLDYYTGVIYEVVTEGSAPATTSSAPEAQKIQRSGKKEKIKVDADEDRSNDPSVG 405

Query: 325 FGSVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITT 382
            GSV  GGRYD LV  F  +  +P  G S G+ R+    K+ +E   +       V +  
Sbjct: 406 VGSVAAGGRYDELVGMFSSKAQIPCVGISFGVDRIFSITKARMEREKSEALRSSEVDVYV 465

Query: 383 MDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           M          L +     +ML  AGI+AE           Q K A+  + P A+I G  
Sbjct: 466 MAFGGKGFTGLLKERMDICRMLWDAGIKAEFSYKVKPKLPQQFKAAESGSVPFAVILGED 525

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           E + G  +IK++                       + + I+ L + VK  L+   
Sbjct: 526 ELAAGEGRIKEM------------GLPEGHPEKDGVLVKIAALPTEVKTRLERRN 568


>gi|117926864|ref|YP_867481.1| histidyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|117610620|gb|ABK46075.1| histidyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 400

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 93/444 (20%), Positives = 173/444 (38%), Gaps = 53/444 (11%)

Query: 20  TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGVFSLQDDDG 78
             E      I  ++R ++  YGF  I  PL E ++   + + +  D   K +++ +D  G
Sbjct: 2   PDESVRWQFIESTLRRVFGQYGFGEIRIPLFEKTELFARAVGETTDIVEKEMYTFEDRGG 61

Query: 79  QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
           + ++LR + TA + R    N      P + Y IGP+FR E+   GR+RQF Q   +  G+
Sbjct: 62  ESLALRPEGTASVVRSFINNGLDRQLPWKAYYIGPMFRYERPQKGRYRQFHQAGAELFGA 121

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
               ADAE+  M+  +L+ +GI              L   +  +G               
Sbjct: 122 EGPLADAEIMAMVLRSLQEIGIA-----------GQLQLEINSLGCPACRPAY------- 163

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
                        +  L +    + G          E+  + V    ++  K++ +    
Sbjct: 164 -------------RAQLTDYLQSHHGALCGNCQNRLERNPLRVLDCKVESCKAIAKEAPK 210

Query: 259 VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
           ++  +      +    ++  +           I+  +VRGL+YYT   +E          
Sbjct: 211 MRDHLCAG-CDHHFAGLTAHLDALQLP---YVINPMMVRGLDYYTRTAFEVTTNA----- 261

Query: 319 KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV 378
                   +V  GGRYDGLV+   G+  PA GF++G+ RL + +     +          
Sbjct: 262 ---LGAQNAVAAGGRYDGLVTEMGGKATPAIGFAMGLERLALLMDESAIAP------PLP 312

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +  ++D+      + + +R AG+  E+ L    +  +Q+K A R N     I G  
Sbjct: 313 ALYVVSLEADT--AAFGFAEQVRGAGLAVEVNL-QGGSMKSQMKKAGRSNARWCAIIGQT 369

Query: 439 ERSRGMLQIKDLAKGKELSREIKN 462
           E     + +KD+ +G + +     
Sbjct: 370 EAQNQQVVLKDMQEGAQATLSWDE 393


>gi|253682644|ref|ZP_04863441.1| histidine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562356|gb|EES91808.1| histidine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 417

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 100/462 (21%), Positives = 180/462 (38%), Gaps = 56/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    +    + I   ++ +   Y    I TP+ E+++   + + +  D 
Sbjct: 1   MAIQAPKGTKDLLPMDSYKWHYIEGKLKELAGEYALKEIRTPIFEHTELFERGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D   + I+L+ + TAP AR   EN       P + +   PVFR E    GR
Sbjct: 61  VQKEMYTFKDKGDRSITLKAEGTAPAARAFIENGLFNEALPIKMFYFTPVFRYENVQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIG 183
            RQ  Q  V+  GSS  + DAE+  +     +  GI   + +I      +      + + 
Sbjct: 121 LRQHHQFGVEVFGSSEASVDAEIIGLAMRAFKEFGINNLELNINNIGCPECRKKYNDALR 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  ++ NE            ++    ++LL  + +               +   +++ +
Sbjct: 181 EYFKNEYNELCDTC-----KTRYERNPMRLLDCKNKK---------CKEIGKDAPVILDY 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D +     L   +                          S   K++  IVRGL+YYT
Sbjct: 227 VCDDCKNHFENLKTYLDAL-----------------------SIEYKVNPYIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E I                +V GGGRY+GL+    G+  PA GF +GI RLI+ L 
Sbjct: 264 KTVFEIINND------------ITVCGGGRYNGLIEEIGGKPTPAVGFGMGIERLILTL- 310

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
               +   I +   + I           +       LR  GI+AE     +K+   Q+KY
Sbjct: 311 --GENNIEIPKPKEIDIYVGSMGERGKIESFKVVNELRKKGIKAECDH-MNKSVKAQMKY 367

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++     ++I G  E   G   +K +  G++    + N + 
Sbjct: 368 ANKIEALYSMIIGETEIEEGKANLKRMEDGQQFEVSLNNLDE 409


>gi|168214146|ref|ZP_02639771.1| histidyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714344|gb|EDT26526.1| histidyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 415

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 98/462 (21%), Positives = 170/462 (36%), Gaps = 57/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  +G  D    +    + I + +R I   YG   I TP+ E ++   + + +  D 
Sbjct: 1   MAIQAQKGTKDMLPNDAYKWHYIEEKLRKISAEYGIREIRTPMFEATELFKRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + TAP  R   EN       P + +   P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGGRSITLKPEGTAPAVRAFIENSLYADAQPTKMFYFTPCFRYEKMQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKI 182
            R+F Q  ++  GS   + DAE+  ++   L      +        +   K      E +
Sbjct: 121 LREFHQYGIEVFGSQEASIDAEILSLVMRALTEDFGIKGLSLNINSLGCPKCRAKFNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             +  +  +             K   +   + + + +     +  K A    + I     
Sbjct: 181 KQYLKENYDNLCETC-------KTRFEKNPMRIIDCKEKRCKEIVKEAPSILDYI----- 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                  E+  +    +   +   G       I   IVRGL+YY
Sbjct: 229 ----------------------CEECSDHFSKLKAYLDVMG---IEYNIDPQIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E I                +V GGGRYD LV    G   PA GF +G+ RL++ L
Sbjct: 264 SKTVFEVIKDGL------------TVCGGGRYDYLVEEVDGPKTPAMGFGLGLERLLLIL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I E     +        +  +       LR AGI+AE+     K+   Q+K
Sbjct: 312 DEEGI---EIPEPVRCEVYIGSMGDRAKLEAMKLAFNLRKAGIKAEIDH-LGKSVKAQMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           YA++       + G  E     ++IK ++ G++    +  NE
Sbjct: 368 YANKIGAKYTFVIGDSEIEENKIKIKRMSDGEQFEISLDINE 409


>gi|322379184|ref|ZP_08053576.1| histidyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321148386|gb|EFX42894.1| histidyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 436

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 132/450 (29%), Positives = 216/450 (48%), Gaps = 29/450 (6%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   GF D   KE   +  +L+ +  ++ ++GF PIETP LEY+  L +   +E   
Sbjct: 2   ITPKTLSGFKDRLPKEAMAKGAVLEKLARVFRSFGFVPIETPHLEYASILTQ---EEGEI 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + + LR+D T PLAR++A++   +  P + Y IG VFR E+   GR+R
Sbjct: 59  QKELYLFKDHGKREVGLRFDQTVPLARFIAQHSHALGLPFKRYAIGNVFRGERAQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GSS+   D+E+  ++  +L+A+ +   ++ + IN+RKIL+G+ +  GLH 
Sbjct: 119 EFTQCDFDFIGSSSSLCDSEIIQVIIASLKALDL--EEFCVWINHRKILNGLCQHFGLHT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++++      LR IDKL K G QGV L L                     ++I+ +    
Sbjct: 177 EEEI---TAFLRIIDKLGKIGQQGVILELKACFPLMDFQAF---------LEIINTKQQE 224

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D  +    +  L       ++G  EL  + +L+     N +  KI  +I RGL YYTG V
Sbjct: 225 DPLEFFKSVAYLKAYNSTLKEGLEELEALFKLLLSLEINPDHFKIDFSIARGLGYYTGIV 284

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           YE  L              GS+  GGRYD L   F  ++ P  G SIG+ RL+V   +LE
Sbjct: 285 YETTLNQLT--------SLGSICSGGRYDNLSKSFSLKSFPGVGASIGLDRLLV---ALE 333

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  +     +  +  D+   S      Q LR + I  E++    K       YA++
Sbjct: 334 ELELIENKSTSARVLVVCMDASHFSYASQIAQNLRQSEINTELYPEIGK-LKKPFGYANQ 392

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           +     ++ G  E  R  L +K++  G + 
Sbjct: 393 KGHEFVVVLGEEEVQRETLTLKNMTTGVQF 422


>gi|148555446|ref|YP_001263028.1| histidyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148500636|gb|ABQ68890.1| histidyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 415

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 98/470 (20%), Positives = 174/470 (37%), Gaps = 56/470 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +         RG  D   ++      ++ +   +   YGF  +E P+ E +    + L
Sbjct: 1   MSRIE--TPRPIRGTQDMLGEQALRFGHVVQTFDRVRRLYGFGRVEVPVFEPTAVFARSL 58

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K ++S +D  G  ++LR + TA +AR           P +    GP+FR E+
Sbjct: 59  GETTDVVSKEMYSFEDRGGDSVTLRPEFTAGIARAYLTEGWQQHAPLKVATHGPLFRYER 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q D + +G++   AD E+  M    L  +G+      + +    + DG  
Sbjct: 119 PQKGRYRQFHQLDAEVIGAAEPQADVELLCMADQLLRELGVADG---VTLTLNTLGDGET 175

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +          E+     + D LD+     +++L  +   D            ++    
Sbjct: 176 REAWRAALVAHFEKHRGELSEDSLDRLAKNPLRILDSKDPRDRP---------VADAAPE 226

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +LS +       +   +            L                       VRGL
Sbjct: 227 IDDYLSAEAGAFFAAVTSGLDAAGVAWTRNARL-----------------------VRGL 263

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY    +E +          +    G+V GGGRYDGL+    G   PA G++ GI RL 
Sbjct: 264 DYYRHTAFEFVT--------DRLGAQGTVLGGGRYDGLIETLGGPATPAVGWAAGIERLA 315

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + +         +     + +  +     + +        LR AGI A+M      N   
Sbjct: 316 MLID--------LPAPERIEVAVVPMGEGAQAFAARALADLRRAGIAADMAYKG--NMKR 365

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +++ AD      A+I G  E +RG + +KD+A   +    I    +    
Sbjct: 366 RMQKADASGARYAVIIGDDEVARGEVSLKDMAGQTQAPVAIDGLVAAIRG 415


>gi|114327269|ref|YP_744426.1| histidyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315443|gb|ABI61503.1| histidyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 427

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 108/465 (23%), Positives = 187/465 (40%), Gaps = 59/465 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + PRG  D   ++ R    ++++ R I   YGFD   TP+ E +    + L +  D   
Sbjct: 16  LQPPRGTHDLIGEDQRRYRHVVETARRIVGLYGFDEWATPVFEDTKVFSRTLGETSDVVT 75

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++  D  G+ ++LR + TA + R +  N  T   P + +  GP+FR E+   GR+RQ
Sbjct: 76  KEMYTFTDRGGEGLTLRPEGTAAICRALVTNGLTQSLPQKVFYAGPMFRYERPQKGRYRQ 135

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G++   ADAE        L A+GI                           
Sbjct: 136 FHQIGLELIGAAEPLADAEAIACGWQILNALGIGG------------------------- 170

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                  + L      DK      +  L    + +    ++ +    E+  + +     +
Sbjct: 171 ------SVALELNTLGDKASRDAYREALVAYFSAHREALSEESRTRLERNPLRILDSKNE 224

Query: 248 LEKSMHELYELVKGTIAGEKGFNE--LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            ++++     ++   +  E       L      +          + +  IVRGL+YY   
Sbjct: 225 GDRALIADAPVIYDHLTEEAATFYVGLKRHLTQL------GVPFRENPRIVRGLDYYNHT 278

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +               G+V  GGRYDGLV+   G   PA G++ GI RL + L   
Sbjct: 279 AFEFVT--------DALGSQGTVLAGGRYDGLVAEMGGPATPAVGWAAGIERLSMLLAEP 330

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            ++   +  +            +         Q LR AG+RAEM      N   +++ A+
Sbjct: 331 PAAPAPVAVVPV---------GEEEEAALDVVQSLRAAGLRAEMAYRG--NLKRRMERAN 379

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           +     A+I GT ER+RG+ Q+KDL  G++    +    +W  AR
Sbjct: 380 KAGSWAAVILGTEERARGVAQVKDLRSGEQQEVALDGLATWLLAR 424


>gi|71281687|ref|YP_270901.1| histidyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|83305864|sp|Q47WC1|SYH_COLP3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71147427|gb|AAZ27900.1| histidyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 426

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 107/478 (22%), Positives = 185/478 (38%), Gaps = 63/478 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+  L  +  RG  DC   E  I   +   +R +  NYGF  I  P++E +    + +
Sbjct: 1   MAKQKAL--QAIRGMNDCLPSETNIWQMVETVLRRVASNYGFAEIRMPIVESTALFKRGI 58

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   ++        R + +GP+FR+E+
Sbjct: 59  GEVTDIVEKEMYTFDDLNGDSLTLRPEGTASCVRAGNQHGLLYNQEQRLWYMGPMFRHER 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  ++  G +    DAE+ ++ +     +GI        +       R  
Sbjct: 119 PQKGRYRQFHQFGLEAFGIATPDIDAEIILLTSRLWRELGINEFVTLELNSLGSNEERAN 178

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L    L  ++ L+E            +     +++L  +       +    A   S
Sbjct: 179 YREALIAYLLEHEELLDEDS--------KRRMHTNPLRVLDSK--NPQVQEALTNAPKLS 228

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +                             GE+       +   +  +G       ++  
Sbjct: 229 DHF---------------------------GEETQTHFDTLCARLDAAG---INYVLNER 258

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G++  GGRYDGLV +  G+  PA GF++G
Sbjct: 259 LVRGLDYYNRTVFEWVTT--------TLGAQGTICAGGRYDGLVEQLGGKATPAFGFALG 310

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
           I RL++ L  LE  TN   +   V    +    D+        +  R     IR +   G
Sbjct: 311 IERLVLMLTELEKVTNIRPQ---VDAYVVILGDDAQVAANKLAEQWRDQVPEIRLQCHCG 367

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREA 469
              N   QLK AD+    +A+I G  E ++  + +K L  + ++ S E     S    
Sbjct: 368 GG-NMKKQLKRADKSGAQIALILGDDEITQEKVMVKYLRGQKEQESIEFTQVSSLLSE 424


>gi|46397793|sp|Q7VWL1|SYH_BORPE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
          Length = 428

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 103/482 (21%), Positives = 187/482 (38%), Gaps = 64/482 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    RG  D          +  + +R    +YG+  + TP+LE++    + + +  D  
Sbjct: 7   KVSAIRGMNDVLPGPSARWEKFEEIVRGWLRSYGYRNVRTPVLEHTRLFARGIGEVTDIV 66

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D  +G  +++R ++TA + R   E+      P R Y IGPVFR+E+   GR+
Sbjct: 67  EKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPHRVYAIGPVFRHERPQRGRY 126

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q DV+ +G +    DAEM +M+A   + +G++     +    +           + 
Sbjct: 127 RQFHQIDVEALGFAGPDVDAEMIVMLARLWKLLGLQDVRLELNSLGQPAERAAHRAALIE 186

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             ++  + L      D   +     +++L  +                 +    +  FL 
Sbjct: 187 HLERHQDVLD----EDGRRRMYSNPLRVLDTKNPAMQEMA---------DSAPRLFDFLG 233

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                    L + +                              +++  +VRGL+YY   
Sbjct: 234 EASRSHFDGLCQRLADA-----------------------GIEYRLNPRLVRGLDYYNLT 270

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G+V GGGRYDGLV    G+  PA GF+IG+ RL+   +  
Sbjct: 271 VFEWVT--------DRLGAQGTVCGGGRYDGLVELLGGKPTPAVGFAIGMERLLDLWEQ- 321

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +  I++     +  +    +         + LR AG+   +  G++  F  Q K AD
Sbjct: 322 ---SVEIEQPAECEVYIVHQGEEGQRLAARVGEQLRDAGLDVIVHAGAAG-FKAQFKRAD 377

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                +A+I G  E +     IK L                  A  AQ  +P+++L   +
Sbjct: 378 ASGARIAVILGGDEVASRTASIKHLR-------------GPVGADAAQQQVPLAQLADVL 424

Query: 486 KK 487
           K 
Sbjct: 425 KS 426


>gi|206895371|ref|YP_002247110.1| histidyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206737988|gb|ACI17066.1| histidyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 406

 Score =  232 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 101/451 (22%), Positives = 176/451 (39%), Gaps = 55/451 (12%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGV 70
           P+G  D    E     R+   +      YG+  I TP+LE+S+   K L DE D   K +
Sbjct: 5   PKGMRDILPPETFKWRRLEILLSKAALLYGYGEIRTPILEFSELFRKGLGDESDVALKEM 64

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +  +D +G  +SLR + TAP+AR V ++    +   R +  GP+FR E+   GR+RQF Q
Sbjct: 65  YEFEDKNGDVLSLRPEGTAPVARAVIQHHLYDIPVLRLFYTGPMFRRERPQAGRYRQFHQ 124

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++  G S    D E+ +++      + +    +   +   +     +E++       +
Sbjct: 125 FGIEAFGVSQPYMDIEVLLVVKRIFSLLNLPLTIHINSLGCDECRPIYMEQLRNFVLSAI 184

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            E   + R            +KL   +                  +   +  +L    + 
Sbjct: 185 PEDEEIERFK-------KNPLKLFDSKRPEHAE---------VKAEAPKISEYLCPACKD 228

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                                    + ++R +      I     + RG +YYT  V+E  
Sbjct: 229 H-----------------------YAHVIRAAKLFGVPIVEDPQLARGFDYYTRTVFEGY 265

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +G   +          +V GGGRYD LVS + G +VP  GF+IG+ RLI +L+ +     
Sbjct: 266 VGEFNL----------AVVGGGRYDHLVSFYGGPDVPGIGFAIGLERLITSLEKVPIIDP 315

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
             K+             D +       + LR  GI   M L   K    QLK A++    
Sbjct: 316 EPKK----TYFLATTGEDMIEPAFQLAEKLRDHGIGIIMDLRQGK-LQKQLKLANKVEVR 370

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +I G  E+   ++ ++D+  G++     +
Sbjct: 371 YVLILGEEEQRNHVITLRDMVTGEQRIVAQE 401


>gi|120601078|ref|YP_965478.1| histidyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166227965|sp|A1V9B1|SYH_DESVV RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|120561307|gb|ABM27051.1| histidyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 417

 Score =  232 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 96/460 (20%), Positives = 178/460 (38%), Gaps = 59/460 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K TK++     GFAD    E  +  R+    R ++  YGF  + TP+LE +D   + +
Sbjct: 1   MSKITKIK-----GFADLFPPESDVFTRMESVARQVFGRYGFVELRTPILERTDLFCRSI 55

Query: 61  P-DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNE 118
             + D   K +++  D   + +++R + TA + R   E+      P  + +  GP+FR E
Sbjct: 56  GTETDVVQKEMYTFPDRKDRSLTMRPEATAGVMRAYIESGRHTQEPVSKLFTSGPMFRYE 115

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR RQF Q + + +G     ADAE+ +M+   L  +G+      I     K    +
Sbjct: 116 RPQKGRMRQFHQINCEVLGPVEPHADAELVLMLMRFLTELGLTGLSLQINSLGCKECRPL 175

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
             K      D L          D   +     +++L  +           G    +    
Sbjct: 176 YRKA---LSDFLASIDNAALCEDCRRRMETNPLRVLDCK---------VPGCRELTANAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++     +       +  ++                          +    ++  +VRG
Sbjct: 224 TILEHNCPECRTHFDAVLRILDS-----------------------RNVPYVLNDRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY    +E +               GSV GGGRYDGL+S+  G +VP  GF+ G+ RL
Sbjct: 261 LDYYNRTTFEVV--------SDSIGSQGSVAGGGRYDGLISQLGGPDVPGVGFACGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + +   E+                  D  +     +  + LR  G+   +  G+  +  
Sbjct: 313 ALMMPGAEA--------PRPHFHVAVLDPAAQDAALLLAEDLRAQGLAGSVGFGAG-SIK 363

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           ++++ A +      +I G  E + G + +KD+  G++ + 
Sbjct: 364 SRMRLAGKSGARACLILGGDELAAGTVVVKDMDSGEQETI 403


>gi|317151961|ref|YP_004120009.1| histidyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942212|gb|ADU61263.1| histidyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 418

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 93/465 (20%), Positives = 171/465 (36%), Gaps = 60/465 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K++     GF D   +E     R+    R+I+  Y F  + TP+LE ++   K +
Sbjct: 1   MAKIQKIK-----GFVDLFPEEAAKFTRMETLARDIFSRYAFGELRTPVLEKTELFQKSI 55

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNE 118
            +  D   K +F+  D   + +++R + TA + R   E+         + +  GP+FR E
Sbjct: 56  GEDTDVVGKEMFTFPDRKDRSLTMRPEATAGVVRAFIESGTHQPGKVSKFFTFGPMFRYE 115

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR RQF Q + +  G+    AD E+ +M+   L A+G+ +    +           
Sbjct: 116 RPQKGRQRQFHQINAEIFGAPEAQADGELILMLRTFLNALGLTKLTVELNSLGCHACR-- 173

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
                    D    +       D   +     +++L  +           G     +   
Sbjct: 174 -PAYRQALIDYYTSKDRANFCEDCRRRMDTNPLRVLDCK---------VPGCKALVQDAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   L  + E    ++  ++ G     +    L                       VRG
Sbjct: 224 AITDHLCPECEAHFADVRTILDGANVTYELNPRL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY    +E                  +V GGGRYDGL+    G + PATGF+ G+ RL
Sbjct: 261 LDYYVRTCFEV--------SSHDIGAQTAVAGGGRYDGLIRSLDGPDCPATGFACGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                   +      E           D+ + +   ++ Q LR AG   E+      +  
Sbjct: 313 --------ALLLERLEAPAPDFYLAVVDNAAANAAMLFAQQLRDAGQSGEVGYCGG-SMK 363

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKN 462
           ++++ A++    + +I G  E   G + +K +   G++ +     
Sbjct: 364 SRMRAANKSGAKVCLIMGGDELDNGTVTVKPMTGDGEQTTVSRAE 408


>gi|269217251|ref|ZP_06161105.1| histidine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129388|gb|EEZ60473.1| histidine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 454

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 102/474 (21%), Positives = 174/474 (36%), Gaps = 64/474 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +    P G  D      R      D    ++  YG+D +ETP+ E ++   + + +  D 
Sbjct: 1   MAYNSPEGTVDLLPGAARHWRHAQDVAARLFSAYGYDFMETPIFEQTEVFTRGIGEATDV 60

Query: 66  PNKGVFSL-------------QD---DDGQWISLRYDLTAPLARYVAENFDTIVF--PCR 107
            NK +F +              D        +SLR + TA + R V ++        P +
Sbjct: 61  VNKEMFVVRSGENYRRSLEAGTDAGLKGKSRLSLRPEGTAGVVRAVVQHNLVEQGATPAK 120

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y  GP+FR E+   GR R+F Q   + +GS+  TADAEM +M+    E +GI  +D  +
Sbjct: 121 LYYAGPMFRAERPQKGRLREFHQIGAECLGSTEPTADAEMIIMLVRFYEKMGIPASDMTL 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +N+                 +   R  +L   D++     +  +               
Sbjct: 181 YVNSMGDERCRPAY-------RAMVRDHILSHADEMC----EECRRRADANPLRAFDCKN 229

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                       +   L  D       +   +                            
Sbjct: 230 AACAHVMASAPRITDHLCDDCRSHYEAVKSYLD-----------------------VAGI 266

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
             +   T+VRGL+YYT  V+E                  ++GGGGRYD L     G+  P
Sbjct: 267 AYEEDPTLVRGLDYYTRTVFEV-------QSNAIDAAQNAIGGGGRYDKLAETVGGRPTP 319

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             GF++G  R+++AL++  +     +    V +     D+   S      +  R AG+R 
Sbjct: 320 GLGFALGYERVMLALEASGALA---EASPYVDLYVACVDATVRSVAFDLVRTARDAGLRV 376

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           EM     K+  +Q K A + N    I+ G  E   G + ++D+   +E +  I+
Sbjct: 377 EMDH-QGKSLKSQFKAAGKMNARKVIVVGPDELEHGQVVVRDMVTHEERTASIE 429


>gi|327481752|gb|AEA85062.1| histidyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 429

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 103/488 (21%), Positives = 184/488 (37%), Gaps = 73/488 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +      +  +   + ++YG+  I  P+LE++D   + +
Sbjct: 1   MSKS----LQAIRGMNDILPAQTPTWRYLESTFAQLLDSYGYSEIRLPILEFTDLFARGI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D  +K +++  D + + ++LR + TA   R V E+  T      + +  GP+FR E
Sbjct: 57  GEGTDVVDKEMYTFLDRNEESLTLRPEGTAGCVRAVLEHGMTGGGQVQKLWYTGPMFRYE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           K   GR+RQF Q  V+         DAE+ ++ A   + +G                   
Sbjct: 117 KPQKGRYRQFHQIGVEVFNQPGPDIDAELIVLTARLWKQLGLADAVTLQLNSLGSSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L++     D+            D   +     +++L  +       +    
Sbjct: 177 RYRDALVAYLQQRFEQLDE------------DSQRRLTTNPLRILDSK-------NAQTQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A LT      +  +L  +       L   +                              
Sbjct: 218 ALLTD--APTLHDYLDEESRAHFEGLKARLDA-----------------------VGIAY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +I+  +VRGL+YY   V+E +          K    G+V  GGRYDGLVS+F G+  P  
Sbjct: 253 EINPKLVRGLDYYGRTVFEWVT--------DKLGAQGTVCAGGRYDGLVSQFGGKPTPGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRA 407
           GF++G+ RL++ L++L      +       I      ++  +      + LR    G+R 
Sbjct: 305 GFAMGVERLVLLLETLGLVPETLNPTPHAYICAFGEAAELAALALA--ERLRDELPGLRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
            +  G   +F +Q K AD+     A+I G  E +  ++  K L    ++ S         
Sbjct: 363 LVNAGGG-SFKSQFKKADKSGARYALILGDDELAGRVVGCKPLRDDSEQQSIAWDALPER 421

Query: 467 REARVAQI 474
             A + Q+
Sbjct: 422 LAACLEQV 429


>gi|282866230|ref|ZP_06275277.1| histidyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282559014|gb|EFB64569.1| histidyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 420

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 87/476 (18%), Positives = 173/476 (36%), Gaps = 69/476 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D    +      + +++     N G+  IETP  E  +   + + +  D  
Sbjct: 3   TFQAPKGTYDLIPPDSAKYLAVREALSAPLRNSGYGYIETPGFEDVNLFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
           +K +++ +   G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  SKEMYAFETKGGDKLALRPEGTASVLRAALEANLHKAGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G+           D       R+ L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLSEFRILLNSLGDKECRPVYREALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G L  + L  + +    +  LR +D         V+  L                     
Sbjct: 183 GFLRDLDLDEETRRRIEINPLRVLDDKRT----EVQKQLT-------------------G 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+  L+       +   +L                       V
Sbjct: 220 APMLRDYLCDACKAYHEEVRTLLTAAGVVYEDDEKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++       +       +  +    ++          LR AG+  +   G  + 
Sbjct: 309 RTVLALEAEGI---ELDIPATTSVYAVPLGEEARRVLFGLVTELRKAGVATDFAFG-GRG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +K A+R      ++ G  + + G +Q+KD+  G +    + +  +  +  +A
Sbjct: 365 LKGAMKSANRSGARYTVVAGERDLAEGNVQLKDMESGDQRPVAVGDLVAVVQGELA 420


>gi|254383750|ref|ZP_04999099.1| histidyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342644|gb|EDX23610.1| histidyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 433

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 111/469 (23%), Positives = 191/469 (40%), Gaps = 42/469 (8%)

Query: 5   TKLRAELP-RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           ++L    P RG  D    E+ +R ++   +    E YG+   + P+LE ++        E
Sbjct: 2   SRLLPTAPYRGTRDFLPAEMSVRQQVFGHLYETVERYGYGRYDGPILESAEIYEAKSGQE 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              N+ ++SL D  G+ I+LR ++T  +AR +A N  ++ FP R Y      R E+   G
Sbjct: 62  -IANQQLYSLTDRGGRRIALRPEMTPSVARMIAANAGSLQFPVRWYSHVNCHRYERPQRG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R R+  Q +VD  GS +   + E+  ++ D + ++G  R+ + + + +R IL+ IL  + 
Sbjct: 121 RTREHWQLNVDIFGSDSPNCEIEIFDLIHDVMGSLGATRDMWVLRVGDRAILNSILRDVV 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              +         +  ID+ +K   + ++    E   D                D++ S 
Sbjct: 181 KVPES---AHQQTMALIDRWEKVPAEKLREDAAEFGVDGRM------------FDLLEST 225

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L    E       E+ + +   +   +E               +       IVRGL+YYT
Sbjct: 226 LRSGAEVLPDLPDEVREASPLAQVMKSE-------------AKDLFVFDPFIVRGLQYYT 272

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E     P  N         S+ GGGRY  L   F  Q +P  GF +G   L   L 
Sbjct: 273 STVFEVFDLSPENN--------RSLFGGGRYGDLAGLFTNQRIPGIGFGMGDVTLHDFLD 324

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +        +    V +  +  D + +   +   + LR AGIR    L   +  G +L  
Sbjct: 325 THGLLP---EAKNEVDVAVIPVDDELIPASREVARTLRQAGIRTSTTL-EPRKLGKELSR 380

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ADR     A+I G  E  R  + ++DL    +    + +  +    R+A
Sbjct: 381 ADRSGAGFAVIVGRDEWQRQAVVLRDLKGAAQHEIALADVVAHLTERLA 429


>gi|322379990|ref|ZP_08054258.1| histidyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147579|gb|EFX42211.1| histidyl-tRNA synthetase [Helicobacter suis HS5]
          Length = 436

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 132/450 (29%), Positives = 216/450 (48%), Gaps = 29/450 (6%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   GF D   KE   +  +L+ +  ++ ++GF PIETP LEY+  L +   +E   
Sbjct: 2   ITPKTLSGFKDRLPKEAMAKGAVLEKLARVFRSFGFVPIETPHLEYASILTQ---EEGEI 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + + LR+D T PLAR++A++   +  P + Y IG VFR E+   GR+R
Sbjct: 59  QKELYLFKDHGKREVGLRFDQTVPLARFIAQHSHALGLPFKRYAIGNVFRGERAQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GSS+   D+E+  ++  +L+A+ +   ++ + IN+RKIL+G+ +  GLH 
Sbjct: 119 EFTQCDFDFIGSSSLLCDSEIIQVIIASLKALDL--EEFCVWINHRKILNGLCQHFGLHT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++++      LR IDKL K G QGV L L                     ++I+ +    
Sbjct: 177 EEEI---TAFLRIIDKLGKIGQQGVILELKACFPLMDFQAF---------LEIINTKQQE 224

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D  +    +  L       ++G  EL  + +L+     N +  KI  +I RGL YYTG V
Sbjct: 225 DPLEFFKSVAYLKAYNSTLKEGLEELEALFKLLLSLEINPDHFKIDFSIARGLGYYTGIV 284

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           YE  L              GS+  GGRYD L   F  ++ P  G SIG+ RL+V   +LE
Sbjct: 285 YETTLNQLT--------SLGSICSGGRYDNLSKSFSLKSFPGVGASIGLDRLLV---ALE 333

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  +     +  +  D+   S      Q LR + I  E++    K       YA++
Sbjct: 334 ELELIENKSTSARVLVVCMDASHFSYASQIAQNLRQSEINTELYPEIGK-LKKPFGYANQ 392

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           +     ++ G  E  R  L +K++  G + 
Sbjct: 393 KGHEFVVVLGEEEVQRETLTLKNMTTGVQF 422


>gi|328350011|emb|CCA36411.1| histidyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 493

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 109/513 (21%), Positives = 197/513 (38%), Gaps = 64/513 (12%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  +   + P+G  D   K++ IR  I   +  +++ +G   I+TP+ E  + L     
Sbjct: 4   SKIKEFTLKTPKGTKDWADKDMVIREGIFSYLSTLFKKHGGVTIDTPVFELREILSGKYG 63

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR----TYRIGPVFRN 117
           ++   +K +++L+D  G+  SLRYDLT P AR+VA N  + +          R  P    
Sbjct: 64  ED---SKLIYNLEDQGGELTSLRYDLTVPFARFVAMNGISSIKRYHIAKVYRRDQPAMTK 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
            +        F      +           +C  +       G+  ND+ + +N+RKILDG
Sbjct: 121 GRMREFYQCDFDVAGAYDTMVPDAEMLEILCSGLQ------GLGINDFKVKLNHRKILDG 174

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I E  G+  +D       V  A+DKLDK   + V+  + +             N   E  
Sbjct: 175 IFEVCGVKEED----VRKVSSAVDKLDKSPWEIVRKEMVDE-----------KNQPEEVA 219

Query: 238 DIMVSFLSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           D +  ++ +           +  E++    +  +G  ++ ++S+ V   G +   +    
Sbjct: 220 DRIGEYVKLSGSINEVLEKLQKDEVLLANESASQGIRDMAILSDYVEAFGISK-LLSFDL 278

Query: 294 TIVRGLEYYTGCVYEAILGF---------------PVMNEKQKPVVFGSVGGGGRYDGLV 338
           ++ RGL+YYTG +YEA+                     ++    V  GS+  GGRYD LV
Sbjct: 279 SLARGLDYYTGLIYEAVTAQSAPPTTVDSKKKKSLKEDDDASDYVGVGSIVAGGRYDNLV 338

Query: 339 SRFKGQNVPATGFSIGISRLIVA-LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             F           +      +  L       +         +  M   +  L++     
Sbjct: 339 GMFSASKKSIPCVGVSFGVERIFSLVRQRLVQDQQVRASHTNVFIMAFGNGFLTERMAVA 398

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L  AGI  E    +  N   Q + A++  C +A+I G  E ++G +++K L  G    
Sbjct: 399 KRLWDAGIETEYLYKNKSNPRRQFEAAEKLGCSIAVILGKDEVAQGKVRVKTLNTG---- 454

Query: 458 REIKNNESWREARVAQITIPISELVSTVKKILQ 490
                             + +  +   VK+ L+
Sbjct: 455 -----------VNDDGELVDLDNVAPYVKEKLE 476


>gi|317488837|ref|ZP_07947368.1| histidyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316912066|gb|EFV33644.1| histidyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 457

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 88/480 (18%), Positives = 170/480 (35%), Gaps = 73/480 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P G  D    E +       +  +++  YG+  IETP+ E ++   + + +  D 
Sbjct: 1   MALQAPEGTKDLLPDEAKFWAHFKATAADMFGRYGYVTIETPVFEQTELFVRGIGEATDV 60

Query: 66  PNKGVFSL-------------QDDDGQWISLRYDLTAPLARYVAENFDTIVF--PCRTYR 110
            +K +F+                     +SLR + TA + R V ++        P +   
Sbjct: 61  VSKEMFTAISGENLNKLLGGGTIKGKSRLSLRPEGTAGVVRAVVQHDLVPQGAAPAKLMY 120

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN------D 164
            GP+FR E+   GR RQF Q  V+ +G+   + DAE  +M+     A+GI  +      +
Sbjct: 121 AGPMFRAERPQKGRQRQFNQVGVECLGAEDPSVDAEGIIMLMRFFAAIGIPVDATRLLVN 180

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
                  R      ++       D+L          +   +  +  ++    +       
Sbjct: 181 SMGCEQCRPAYRDAVKAYMDAHADEL--------CDECKRRAEINPLRAFDCKN------ 226

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                          +   L  D  +    +   + G     +                 
Sbjct: 227 ---PDCAAVMADAPKITEHLCDDCREHYDTVKAYLGGAGLSFE----------------- 266

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
                     +VRGL+YYT  V+E  +        +      ++GGGGRYD L     G+
Sbjct: 267 ------EDPKLVRGLDYYTRTVFEVQVT-------EGMGSQNAIGGGGRYDKLAEEVGGR 313

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             P  GF++G  R  +AL++                     D    ++     Q  R AG
Sbjct: 314 PTPGFGFALGYERCALALQAAG---YEFPAARRCDFFVACVDDSVRAEAFSLVQACRDAG 370

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           +  EM     ++  +Q K AD+    +  + G  E + G ++++++   +E + ++   +
Sbjct: 371 LIGEMDH-QHRSLKSQFKLADKLGAVVVAVLGPDELAAGQVKVRNMRTHQESAADLAALK 429


>gi|257790363|ref|YP_003180969.1| histidyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|325833722|ref|ZP_08166137.1| histidine--tRNA ligase [Eggerthella sp. HGA1]
 gi|257474260|gb|ACV54580.1| histidyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|325485262|gb|EGC87732.1| histidine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 457

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 88/480 (18%), Positives = 170/480 (35%), Gaps = 73/480 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P G  D    E +       +  +++  YG+  IETP+ E ++   + + +  D 
Sbjct: 1   MALQAPEGTKDLLPDEAKFWAHFKATAADMFGRYGYVTIETPVFEQTELFVRGIGEATDV 60

Query: 66  PNKGVFSL-------------QDDDGQWISLRYDLTAPLARYVAENFDTIVF--PCRTYR 110
            +K +F+                     +SLR + TA + R V ++        P +   
Sbjct: 61  VSKEMFTAISGENLNKLLGGGTIKGKSRLSLRPEGTAGVVRAVVQHDLVPQGAAPAKLMY 120

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN------D 164
            GP+FR E+   GR RQF Q  V+ +G+   + DAE  +M+     A+GI  +      +
Sbjct: 121 AGPMFRAERPQKGRQRQFNQVGVECLGAEDPSVDAEGIIMLMRFFAAIGIPVDATRLLVN 180

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
                  R      ++       D+L          +   +  +  ++    +       
Sbjct: 181 SMGCEQCRPAYRDAVKAYMDAHADEL--------CDECKRRAEINPLRAFDCKN------ 226

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                          +   L  D  +    +   + G     +                 
Sbjct: 227 ---PDCAAVMADAPKITEHLCDDCREHYDTVKAYLGGAGLSFE----------------- 266

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
                     +VRGL+YYT  V+E  +        +      ++GGGGRYD L     G+
Sbjct: 267 ------EDPKLVRGLDYYTRTVFEVQVT-------EGMGSQNAIGGGGRYDKLAEEVGGR 313

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             P  GF++G  R  +AL++                     D    ++     Q  R AG
Sbjct: 314 PTPGFGFALGYERCALALQAAG---YEFPAARRCDFFVACVDDSVRAEAFSLVQACRDAG 370

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           +  EM     ++  +Q K AD+    +  + G  E + G ++++++   +E + ++   +
Sbjct: 371 LIGEMDH-QHRSLKSQFKLADKLGAVVVAVLGPDELAAGQVKVRNMRTHQESAADLAALK 429


>gi|332296201|ref|YP_004438124.1| Histidyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179304|gb|AEE14993.1| Histidyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 419

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 96/465 (20%), Positives = 175/465 (37%), Gaps = 53/465 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G  D   K+ +I  +I +  + I   YGF  I TP+ E +    + L +  D 
Sbjct: 1   MNYKAPKGTFDIFGKKAKIYEKIENVSKKIMNLYGFSQIRTPIFEDAGLFVRSLGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K ++  +D   + ++LR + TAP+ R + EN      P + +  G +FR E+   GRF
Sbjct: 61  VQKEMYLFKDKGDRLLALRPEGTAPVIRAIIENKLAQNSPIKLFYTGQMFRYERPQAGRF 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + VG+    +D E+       L+ +G++   +   +      +   E +   
Sbjct: 121 RQFYQFGAEIVGTHDPISDFEIIDSSIKILKELGVEYELHLNSVGCMDCRNVYKEVLLTF 180

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +  NE            +     +++L  +              L +     +  +L 
Sbjct: 181 LKNHENELCENC-----KTRMYKNPLRVLDCKE---------DQCKLITSAAPKITDYLC 226

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              +    +L   +K                              +   +VRGL+YYT  
Sbjct: 227 DGCKIHFEKLQSYLKKF-----------------------KIEYILDPRLVRGLDYYTKT 263

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +EA+                +V GGGRYDGL     G+N+P  GF+ GI RL+  L+ L
Sbjct: 264 AFEAL--------NFSLGSQNAVLGGGRYDGLAEELGGKNLPGVGFASGIERLVTILERL 315

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           + +     +        +    +       +   LR       +F    KN  + +K A 
Sbjct: 316 DKTYEKEHK-----FMVIPVTENEFDFALEFLAQLR--NFVCSLFPYDYKNLKSSMKLAS 368

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           + +C   ++ G  E    M+ +K+L  G++ S       +     
Sbjct: 369 KLDCDYVVLIGQDEIKNNMISLKNLENGQQKSFSKDEFLNIISNE 413


>gi|126133490|ref|XP_001383270.1| histidine tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126095095|gb|ABN65241.1| histidine tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 536

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 127/522 (24%), Positives = 219/522 (41%), Gaps = 67/522 (12%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            +   + P+G  D   K++ IR+ I  S+ ++++ +G   I+TP+ E  + L     ++ 
Sbjct: 39  QQFLLKTPKGTKDWFDKDMVIRDAIFGSLTSLFKRHGGVTIDTPVFELREILTGKYGED- 97

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K +++L+D  G+  SLRYDLT P AR+VA N  + +                   GR
Sbjct: 98  --SKLIYNLEDQGGELTSLRYDLTVPFARFVAMNSISSIKRYHIA-KVYRRDQPAMTKGR 154

Query: 125 FRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
            R+F QCD+D      +   D+E+  ++ + L  +G   N++ + +N+RKILDGI E  G
Sbjct: 155 MREFYQCDIDIAGNYDSMVPDSEILSIVCEGLTNLG--INEFKVKLNHRKILDGIFEACG 212

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  +        V  A+DKLDK   + VK            +  +  +   E  D +  F
Sbjct: 213 VKEE----YVRKVSSAVDKLDKLPWEAVKK-----------EMVQEKDQPEEVADKIGEF 257

Query: 244 LSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + +        S  +  EL+    + +KG  E+  +++ V   G    +I    ++ RGL
Sbjct: 258 VKVKGSIRETLSFLKSSELLANNASAQKGIEEMTTLADYVDAFGIGE-KISFDLSLARGL 316

Query: 300 EYYTGCVYEAIL--------------------GFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
           +YYTG +YEA+                         +++  + V  GS+  GGRYD LV 
Sbjct: 317 DYYTGLIYEAVTEGSAPPENADELKSKAQKNSKDKEVDDASEYVGIGSIAAGGRYDNLVG 376

Query: 340 RFKG-QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-----SDSLSKY 393
            F   +++P  G S G+ R+   +K+  +   +        +  M        +  L + 
Sbjct: 377 MFSNGKSIPCVGISFGVERIFSIIKARAAKQLDKIGSAHTQVYVMAFGGGEGWNGFLKER 436

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
              T  L   G+ AE       N   Q   A++    +A+I G  E   G +++K L +G
Sbjct: 437 MAVTNQLWQEGVNAEYLYKGKANIRKQFDAAEKTGAKVAVILGKEEYPAGQIRLKVLGQG 496

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
            E                    I    LV  VK  L    ++
Sbjct: 497 AESD--------------EGELIKAENLVEAVKAKLDSLNQD 524


>gi|114320408|ref|YP_742091.1| histidyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122311859|sp|Q0A986|SYH_ALHEH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|114226802|gb|ABI56601.1| histidyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 429

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 103/477 (21%), Positives = 186/477 (38%), Gaps = 60/477 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K         RGF+D   ++  +   +  +I+   E YG+  I  P++E ++   + +
Sbjct: 1   MAKG----IRSIRGFSDILPEQTPLWQFVESNIQATLEAYGYREIRLPIVEKTELFSRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   +N        R +  GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTAGCVRCGIQNGLFHGGQPRVWYAGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q   +  G S    DAEM +M A  L  +G++     +            
Sbjct: 117 PQKGRYRQFHQIGAEVYGESGPGVDAEMILMTARLLRCLGLEDVRLELNTLGTGEARAAH 176

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +    +  +        D   +     +++L  +     +           EQ   
Sbjct: 177 RAALV----EYLQAHEDRLDDDARRRLHSNPLRILDTKNPDMQA---------LVEQAPR 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  D       +  ++                              +++  +VRGL
Sbjct: 224 LMDYLDEDSRSHFQAVCRVLD-----------------------QAGVAYRVNPRLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY+  V+E I          +    G+V  GGRYD LV +  G+  PA GF++G+ RL+
Sbjct: 261 DYYSRTVFEWIT--------DRLGAQGTVLAGGRYDTLVEQIGGKPTPAIGFALGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
             L+    S         V        +DSL +     + LR    G+R +M      +F
Sbjct: 313 SLLEESGISGPQSGPHAFV------VSADSL-RALPLVEGLRDRLPGLRLQMQ-TEGGSF 364

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQ 473
            +Q K ADR    LA++ G  E + G   +KDL    ++   + +    +   R  +
Sbjct: 365 RSQFKRADRSGAALALVLGEEELAEGRFGVKDLRGDAEQQRLDPEALSDYLARRWPE 421


>gi|74316613|ref|YP_314353.1| histidyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|123745548|sp|Q3SL69|SYH_THIDA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|74056108|gb|AAZ96548.1| Histidyl-tRNA synthetase, class IIa [Thiobacillus denitrificans
           ATCC 25259]
          Length = 419

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 97/471 (20%), Positives = 176/471 (37%), Gaps = 67/471 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  DC              +R+    YG+  + TP+LE++    + + +  D  
Sbjct: 4   NIQSVRGMNDCLPDAADAWQGFEAIVRDWLRRYGYREMRTPILEHTGLFKRAIGEVTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D+ +G+ ++LR + TA   R V ++        R +  GP+FR+E+   GR+
Sbjct: 64  EKEMYTFVDELNGESLTLRPEGTASSVRAVIQHNLLYDGGKRLWYSGPMFRHERPQKGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG-------IKRNDYHIGINNRKILDGI 178
           RQF Q  V+ +G +    DAE+ +M AD    +G           D+     +R  L   
Sbjct: 124 RQFHQVGVEALGFAGPDVDAELIVMCADLWRELGIAPTLQLNTLGDHGARQRHRSKLIAY 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E      D             D   +     +++L  +     + +          +  
Sbjct: 184 YEAHRDVLD------------ADAQRRLHSNPLRILDSKNPAMQALNA---------EAP 222

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++  L  +       L  L++      +    L                       VRG
Sbjct: 223 RLLDELEDEALNHFDALQGLLRANGIAFEINPRL-----------------------VRG 259

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E +          +    G+V  GGRYDGLV +  G+  PA GF++GI RL
Sbjct: 260 LDYYNRTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQLGGKPAPAAGFAMGIERL 311

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +  +++                  +     + +        LR AG+   +  G   +F 
Sbjct: 312 LALVETSGKPIVPAVPDA----YIVHAGDTADAFAWQAAATLRGAGLAVVLHCGGG-SFK 366

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWRE 468
           +Q+K AD      A+I G  E +   + +K L    ++   E+     + +
Sbjct: 367 SQMKKADASRARYAVIIGDEEAAAQQVSVKPLRGTAEQTRVELALAIEYLK 417


>gi|330950786|gb|EGH51046.1| histidyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 429

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 102/487 (20%), Positives = 186/487 (38%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVARLLDNYGYRQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGLLGIRNAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +            
Sbjct: 177 RYRDALVEYLSARLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRVHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRA 407
           GF++GI RL++ L++LE     I     V +       +  +L+  +     L T  +R 
Sbjct: 305 GFAMGIERLVLLLETLEQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDQLPT--LRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALFALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|110802627|ref|YP_699210.1| histidyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123146002|sp|Q0SRP7|SYH_CLOPS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|110683128|gb|ABG86498.1| histidine--tRNA ligase [Clostridium perfringens SM101]
          Length = 415

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 97/462 (20%), Positives = 170/462 (36%), Gaps = 57/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  +G  D    +    + I + +R I   YG   I TP+ E ++   + + +  D 
Sbjct: 1   MAIQAQKGTKDMLPNDAYKWHYIEEKLRKISAEYGIREIRTPMFEATELFKRGVGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K +++ +D  G+ I+L+ + TAP  R   EN       P + +   P FR EK   GR
Sbjct: 61  VQKEMYTFEDKGGRSITLKPEGTAPAVRAFIENSLYADAQPTKMFYFTPCFRYEKMQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKI 182
            R+F Q  ++  GS   + DAE+  ++   L      +        +   K      E +
Sbjct: 121 LREFHQYGIEVFGSQEASIDAEILSLVMRALTEDFGIKGLSLNINSLGCPKCRAKFNEAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             +  +  +             K   +   + + + +     +  K A    + I     
Sbjct: 181 KQYLKENYDNLCETC-------KTRFEKNPMRIIDCKEKRCKEIVKEAPSILDYI----- 228

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                                  E+  +    +   +   G       I   IVRGL+YY
Sbjct: 229 ----------------------CEECSDHFSKLKAYLDVMG---IEYNIDPQIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E I                +V GGGRYD LV    G   PA GF +G+ RL++ L
Sbjct: 264 SKTVFEVIKDGL------------TVCGGGRYDYLVEEVDGPKTPAMGFGLGLERLLLIL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I E     +        +  +       LR +GI+AE+     K+   Q+K
Sbjct: 312 DEEGI---EIPEPVRCEVYIGSMGDRAKLEAMKLAFNLRKSGIKAEIDH-LGKSVKAQMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           YA++       + G  E     ++IK ++ G++    +  NE
Sbjct: 368 YANKIGAKYTFVIGDSEIEENKIKIKRMSDGEQFEVSLDINE 409


>gi|118617356|ref|YP_905688.1| histidyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|229558697|sp|A0PPE8|SYH_MYCUA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|118569466|gb|ABL04217.1| histidyl-tRNA synthetase HisS [Mycobacterium ulcerans Agy99]
          Length = 420

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 92/464 (19%), Positives = 173/464 (37%), Gaps = 68/464 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  D    +      + D +       G+  IE P+ E +    + + +  D  +K +
Sbjct: 7   PKGVPDYVPPDSAQFVAVRDGLLTAARRAGYGHIELPIFEDTALFARGVGESTDVVSKEM 66

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+RQ  
Sbjct: 67  YTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGALPVKLCYAGPFFRYERPQAGRYRQLQ 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEK 181
           Q  V+ +G      DAE+  +      ++G            D       R++L   L  
Sbjct: 127 QVGVEAIGVDDPALDAEVIAIADAGFRSLGLDGFRLEITSLGDETCRPQYRELLQEFLFG 186

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + L  + +    L  LR +D         V+ +  E                     +++
Sbjct: 187 LDLDDETRRRAALNPLRVLDDKRP----EVRAMTAE-------------------APVLL 223

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             LS   ++    +   +                               I+  +VRGL+Y
Sbjct: 224 DHLSDVAKQHFDTVLAHLDAL-----------------------RVPYVINPRMVRGLDY 260

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E +                 +GGGGRYDGL+ +  GQ++   GF +G+ R ++A
Sbjct: 261 YTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMKQLGGQDLSGIGFGLGVDRTMLA 312

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L++   S           +  +     +     +    LR +G+R ++  G  +     +
Sbjct: 313 LRAEGKSVGESARCD---VFGVPLSEQAKLTLAVLAGQLRASGVRVDLAYG-DRGLKGAM 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           + ADR    +A++ G  +   G + +KDL  G+++S    +   
Sbjct: 369 RAADRSGARVALVTGDRDIEAGTVGVKDLGTGEQVSVSTDSVVD 412


>gi|330975906|gb|EGH75972.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 429

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 102/487 (20%), Positives = 186/487 (38%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVARLLDNYGYRQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGLLGIRNAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R  L   L       D+            D   +     +++L  +            
Sbjct: 177 RYRDALVEYLSARLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRVHFEGLKTRLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRA 407
           GF++GI RL++ L++LE     I     V +       +  +L+  +     L T  +R 
Sbjct: 305 GFAMGIERLVLLLETLEQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDQLPT--LRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|91788469|ref|YP_549421.1| histidyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91697694|gb|ABE44523.1| histidyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 452

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 97/488 (19%), Positives = 187/488 (38%), Gaps = 68/488 (13%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL A   +G  D    +      + D +R +   Y +  I TP+LE++    + + 
Sbjct: 16  AKIEKLTA--VKGMNDILPPDSARWEWLEDKVRTLMGRYAYRNIRTPILEHTQLFVRGIG 73

Query: 62  D-EDRPNKGVFSLQDDDGQ-----WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
           +  D   K ++S +D   +      +++R + TA + R V E+        R Y +GP+F
Sbjct: 74  EVTDIVEKEMYSFEDRADKYGDHDHLTMRPENTASVVRAVTEHNLLYEGGKRLYYMGPMF 133

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R E+   GR+RQF Q   + +G +    DAE+ ++ A   + +G+      I        
Sbjct: 134 RRERPQRGRYRQFHQIGAEALGFAGPEVDAELILLAAALWKELGLSDWRLEINSLG---- 189

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
                      D++   R  ++  +++      +  +  L                   +
Sbjct: 190 ---------QPDERAQHRAQLIAHLEQHADVLDEEARRRLHSNPLRILDTKNPVMQAVVD 240

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++ FL          L  ++                               ++  +
Sbjct: 241 SAPRLIDFLGPQSLAHFEGLKAILDAN-----------------------GIPWTLNPRL 277

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   V+E +          +    G++  GGRYD L+ +  G+  PA G+++G+
Sbjct: 278 VRGLDYYNLTVFEFVT--------DRLGAQGTICAGGRYDYLIEQMGGKAAPAVGWALGV 329

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS- 414
            R++  +K   ++          +I     ++ +L       Q LR AG+  +M  G+S 
Sbjct: 330 ERVLELIKEQGAAVTPPVPDAYAVI----PEASALPVVLQTLQALRAAGVSVQMHAGASA 385

Query: 415 ---KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK-------ELSREIKNNE 464
               +  +Q K AD      A+I G  E ++G + +K L  G+       +  + + +  
Sbjct: 386 DGMGSMKSQFKKADGSGARFALIFGPAELAQGHVAVKPLR-GEKADVAQVQTLQPLDDVS 444

Query: 465 SWREARVA 472
           +W  A  A
Sbjct: 445 AWAHALRA 452


>gi|237744014|ref|ZP_04574495.1| histidyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229431243|gb|EEO41455.1| histidyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 413

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 99/466 (21%), Positives = 188/466 (40%), Gaps = 57/466 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   +E +    I +  + ++ENYG++ ++TP+ E ++   + + +  D
Sbjct: 1   MKLIKAVRGTKDIIGEEAKKYVYISNVAQKMFENYGYNFVKTPIFEETELFKRGIGEATD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
              K +++ +D   + I+LR + TA L R   EN         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGDRSITLRPENTASLVRCYLENAIYAKEEISRFYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKI 182
           R R+F Q  ++  G  +   DAE+  +    L+ +GI   +  I     K    I  EK+
Sbjct: 121 RQREFNQIGLEVFGEKSPKVDAEVIAIGYKFLKKLGISDLEVKINSVGSKESRTIYREKL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H    L++        D  D+     ++LL  +   D             +    ++ 
Sbjct: 181 IEHFSKHLDDM-----CDDCKDRINRNPLRLLDCKVDKDKDFY---------KSAPNIID 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  D  K   ++ + +                            +     T+VRGL+YY
Sbjct: 227 FLFEDERKHYEDVKKYLD-----------------------VFGIKYTEDPTLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E +          K    G+V GGGRYD L+     +++PA GF+ G+ R+++ L
Sbjct: 264 SSTVFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                            +       ++        + LR   I+  +     K   + +K
Sbjct: 316 GE-------NYPKNNPDVYIAWLGENTSETALKIAESLRDNDIKVYIDYSE-KGMKSHMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            AD+ +    II G  E ++G++ +KD +  ++   +I+   +  +
Sbjct: 368 KADKLSVRYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIVNQIK 413


>gi|169835972|ref|ZP_02869160.1| histidyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 441

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 138/470 (29%), Positives = 226/470 (48%), Gaps = 39/470 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRP 66
           +  +P GF +    E    NR+++ +R +YE YGF PI+TP LE S+  L K   +    
Sbjct: 5   KPRIPSGFPEYLPAEQIEFNRLVNIVRRVYEEYGFSPIDTPDLELSEVLLTKSGGET--- 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + ++         +++R+DLT PLARYVA++   ++FP R Y IG V R E+   GRFR
Sbjct: 62  EQQIYRFI-KGSNDLTMRFDLTVPLARYVAQHESELIFPFRRYHIGKVHRGERAQAGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD+D +GS++   DAEM +++    E       ++ + INNRKIL+G  E +GL  
Sbjct: 121 EFYQCDIDVIGSNSVAVDAEMPIVINKIFEQFD--IGEFTVHINNRKILNGFFESLGLSN 178

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K      VLR +DK+DK         L                L+++QI  +  F++I
Sbjct: 179 ISK-----DVLRIVDKIDKISANSFTEELER------------LGLSADQITRLREFINI 221

Query: 247 DLEKSM----HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +  K +     E   L   +   ++G  E+ ++ + +R  G + +R  I   I RGL+YY
Sbjct: 222 NGSKDVILNKLEKISLNCKSDQFKQGVKEVGLVVKTIRDFGLSDSRFMIDLRIARGLDYY 281

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG VYE  L              GS+  GGRYD L S +  + +P  G SIG+SRL   L
Sbjct: 282 TGTVYETTLN--------NHPEIGSICSGGRYDNLASHYTKKYLPGVGVSIGLSRLFYKL 333

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             + +    +       +  M   S  ++      + LR+ GI   ++   + N   +LK
Sbjct: 334 CEIGA--IELTRFSSAEVVVMPIGSGQITASVRIAERLRSTGINTMLYTEEN-NMRKKLK 390

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           YAD+      ++ G  E     + +K++  G+ +  +    +S+   ++ 
Sbjct: 391 YADKMGFEWVVLIGEDELLTEEVMLKNMLTGESIRIKSVELDSFLLDKIK 440


>gi|330936983|gb|EGH41081.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 429

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 102/487 (20%), Positives = 187/487 (38%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVARLLDNYGYRQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGLLGIRNAVKLELNSLGTSEGRA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L       D+            D   +     +++L  +            
Sbjct: 177 RYREALVEYLSARLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRVHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRA 407
           GF++GI RL++ L++LE     I     V +       +  +L+  +     L T  +R 
Sbjct: 305 GFAMGIERLVLLLETLEQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDQLPT--LRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|303312793|ref|XP_003066408.1| Histidyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240106070|gb|EER24263.1| Histidyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 590

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 127/535 (23%), Positives = 220/535 (41%), Gaps = 76/535 (14%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M K       + P+G  D    +  +R+RI  +I N+++ +G   ++TP+ E  + L   
Sbjct: 68  MPKDKVTFNLKTPKGTKDWAGPDALLRDRIFSTITNVFKRHGGTALDTPVFELREILAGK 127

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N D  V   + Y I  V+R ++
Sbjct: 128 YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPD--VRSIKRYHIAKVYRRDQ 182

Query: 120 H----GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
                G  R       D+      A   DAE+  ++++  E +G  + +Y I IN+RKIL
Sbjct: 183 PAMTKGRMREFYQCDFDIAGANFDAMVPDAEILRIISEVFEDLG-WKGNYLIKINHRKIL 241

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           DG+ E  G+  +    +   +  A+DKLDK     V+  + +              L   
Sbjct: 242 DGVFEVCGVPKE----KIRTISSAVDKLDKLPWADVRKEMVDE-----------KGLDPA 286

Query: 236 QIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             D + +++     + + +     E++ G  + + G  E+ ++ + ++      ++I   
Sbjct: 287 VADKIETYVVRKGGRELLDSLKSDEMLVGNSSAKTGLEEMGLLMDYLQTFNIL-DKISFD 345

Query: 293 STIVRGLEYYTGCVYEAI----------------------------LGFPVMNEKQKPVV 324
            ++ RGL+YYTG +YE +                            +           V 
Sbjct: 346 MSLARGLDYYTGVIYEVVTEGSAPATTSSAPEAQKIQRSGKKEKIKVDADEDRSNDPSVG 405

Query: 325 FGSVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITT 382
            GSV  GGRYD LV  F  +  +P  G S G+ R+    K+ +E   +       V +  
Sbjct: 406 VGSVAAGGRYDELVGMFSSKAQIPCVGISFGVDRIFSITKARMEREKSEALRSSEVDVYV 465

Query: 383 MDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           M          L +     +ML  AGI+AE           Q K A+  + P A+I G  
Sbjct: 466 MAFGGKGFTGLLKERMDICRMLWDAGIKAEFSYKVKPKLPQQFKAAESGSVPFAVILGED 525

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           E + G  +IK++                       + + I+ L + VK  L+   
Sbjct: 526 ELAAGEGRIKEM------------GLPEGHPEKDGVLVKIAALPTEVKTRLERRN 568


>gi|260494400|ref|ZP_05814531.1| histidyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260198546|gb|EEW96062.1| histidyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 413

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 100/466 (21%), Positives = 188/466 (40%), Gaps = 57/466 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   +E +    I +  + ++ENYG++ ++TP+ E ++   + + +  D
Sbjct: 1   MKLIKAVRGTKDIIGEEAKKYVYISNVAQKMFENYGYNFVKTPIFEETELFKRGIGEATD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
              K +++ +D   + I+LR + TA L R   EN         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGDRSITLRPENTASLVRCYLENAIYAKEEISRFYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKI 182
           R R+F Q  ++  G  +   DAE+  +    LE +GI   +  I     K    I  EK+
Sbjct: 121 RQREFNQIGLEVFGEKSPKVDAEVIAIGYKFLEKLGISDLEVKINSVGSKESRTIYREKL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H    L++        D  D+     ++LL  +   D             +    ++ 
Sbjct: 181 IEHFSKHLDDM-----CDDCKDRINRNPLRLLDCKVDKDKDFY---------KSAPNIID 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  D  K   ++ + +                            +     T+VRGL+YY
Sbjct: 227 FLFEDERKHYEDVKKYLD-----------------------VFGIKYTEDPTLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E +          K    G+V GGGRYD L+     +++PA GF+ G+ R+++ L
Sbjct: 264 SSTVFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                            +       ++        + LR   I+  +     K   + +K
Sbjct: 316 GE-------NYPKNNPDVYIAWLGENTSETALKIAESLRDNDIKVYIDYSE-KGMKSHMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            AD+ +    II G  E ++G++ +KD +  ++   +I+   +  +
Sbjct: 368 KADKLSVRYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIVNQIK 413


>gi|46581769|ref|YP_012577.1| histidyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|50403648|sp|P62379|SYH_DESVH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|46451192|gb|AAS97837.1| histidyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232328|gb|ADP85182.1| histidyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 417

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 95/460 (20%), Positives = 177/460 (38%), Gaps = 59/460 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K TK++     GFAD    E  +  R+    R ++  YGF  + TP+LE +D   + +
Sbjct: 1   MSKITKIK-----GFADLFPPESDVFTRMESVARQVFGRYGFVELRTPILERTDLFCRSI 55

Query: 61  P-DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNE 118
             + D   K +++  D   + +++R + TA + R   E+      P  + +  GP+FR E
Sbjct: 56  GTETDVVQKEMYTFPDRKDRSLTMRPEATAGVMRAYIESGRHTQEPVSKLFTSGPMFRYE 115

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR RQF Q + + +G     ADAE+ +M+   L  +G+      I     K    +
Sbjct: 116 RPQKGRMRQFHQINCEVLGPVEPHADAELVLMLMRFLTELGLTGLSLQINSLGCKECRPL 175

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
             K      D L          D   +     +++L  +           G    +    
Sbjct: 176 YRKA---LSDFLASIDNAALCEDCRRRMETNPLRVLDCK---------VPGCRELTANAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++     +       +  ++                          +    ++  +VRG
Sbjct: 224 TILEHNCPECRTHFDAVLRILDS-----------------------RNVPYVLNDRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY    +E +               GSV GGGRYDGL+S+  G +VP  GF+ G+ RL
Sbjct: 261 LDYYNRTTFEVV--------SDSIGSQGSVAGGGRYDGLISQLGGPDVPGVGFACGMERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + +           +           D  +     +  + LR  G+   +  G+  +  
Sbjct: 313 ALMM--------PGADAPRPHFHVAVLDPAAQDAALLLAEDLRAQGLTGSVGFGAG-SIK 363

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           ++++ A +      +I G  E + G + +KD+  G++ + 
Sbjct: 364 SRMRLAGKSGARACLILGGDELAAGTVVVKDMDSGEQETI 403


>gi|315452974|ref|YP_004073244.1| histidyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132026|emb|CBY82654.1| histidyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 436

 Score =  231 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 129/450 (28%), Positives = 217/450 (48%), Gaps = 29/450 (6%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   GF D   KE   +  +LD + +++ ++GF PIETP LEY+  L +   +E   
Sbjct: 2   ITPKTLSGFKDRLPKEAMAKGAVLDKLASVFRSFGFVPIETPHLEYASILTQ---EEGEI 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + + LR+D T PLAR++A++   +  P + Y IG VFR E+   GR+R
Sbjct: 59  QKEIYLFKDHGKREVGLRFDQTIPLARFIAQHHHALGLPFKRYAIGNVFRGERAQRGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   D+E+  ++  +L+A+G+  +++ + IN+RKIL+G+ E  GLH 
Sbjct: 119 EFTQCDFDFIGSKSLLCDSEIIQVIIASLKALGL--DEFSVWINHRKILNGLCEHFGLHT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            ++++    +LR +DKL K G +GV L L                 T + + I+ +  + 
Sbjct: 177 QEEIHA---LLRVVDKLSKIGQEGVLLEL--------KALFPQLQFT-DLLKIINTKQNG 224

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D  +    +  L       ++G  EL  +  L+     N    K+  +I RGL YYTG V
Sbjct: 225 DPLEFFKSVAYLKDYNPTLKEGLEELESLFNLLLCLEINPEHFKVDFSIARGLGYYTGIV 284

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           YE  +              GSV  GGRYD L   F  Q++P  G SIG+ RL+V    LE
Sbjct: 285 YETTINSLAT--------LGSVCSGGRYDNLSKSFSTQSLPGVGASIGLDRLLV---GLE 333

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  +     +  +       +      Q  R + + AE++    K       YA++
Sbjct: 334 ELELVESKSTSARVLVVCMHPSHFAYASQVAQKFRQSDVNAELYPEVEK-LKKPFSYANQ 392

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           +     ++ G  E     L +K++  G ++
Sbjct: 393 KGHEFVVVLGEEEVRNKSLTLKNMTTGVQV 422


>gi|309371256|emb|CBX33102.1| CBR-HARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 556

 Score =  231 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 134/501 (26%), Positives = 224/501 (44%), Gaps = 48/501 (9%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLP 61
           K  K   +  +G  D    +  +RN +L ++   +  YG + I+TP+ E  D L GK+  
Sbjct: 91  KPGKFVLKTGKGTRDYGPAQSALRNSVLQNVVETFNKYGAETIDTPVFELRDVLMGKYGE 150

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH- 120
           +     K V+ LQD  G+ +SLRYDLT P ARY+A N    +     Y+I  V+R ++  
Sbjct: 151 EG---GKLVYDLQDQGGELLSLRYDLTVPFARYLAMNK---ITNITRYQIAKVYRRDQPV 204

Query: 121 -GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F QCD D  G          C+ + + L    ++  ++ I +N+R IL+G+ 
Sbjct: 205 MSRGRYREFYQCDFDIAGQYDLMLPEAECLGIVNELLT-KLEIGEFFINLNHRLILEGMF 263

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+   D       +  ++DKLDK     V+  + + +       +K   L   +   
Sbjct: 264 AVSGISPKD----FKTICSSVDKLDKTPWAEVEEEMIKEKFLTKEQTSKLGELVRFRELN 319

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                   LEK        +      +KG  EL V+   +   G  + R + S  + RGL
Sbjct: 320 SNLNNLELLEK--MSALPELGQNEKFKKGAEELKVLIGYLEVDGVTTVRYEPS--LARGL 375

Query: 300 EYYTGCVYEAILG--------FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-NVPATG 350
           +YYTG +YEA+              +   +PV  GSV  GGRYDGLV+ F  +  VP  G
Sbjct: 376 DYYTGAIYEAVAPKALEGTAAEKAEDTAGQPVGVGSVAAGGRYDGLVNMFDSKLKVPCCG 435

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            S GI RL   +++ +    +        +       + + + +   + LR AGI++EM 
Sbjct: 436 VSFGIERLFAIMEARQK---SAVRTTQTEVYVASAQKNMVIERKKLLRTLRAAGIKSEMP 492

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           L ++     Q +YA+ R  PL ++ G  E   G+++++++   +E               
Sbjct: 493 LKANPKLLTQFQYAEERRIPLVVLIGERELQEGIVKLRNVVSREEKD------------- 539

Query: 471 VAQITIPISELVSTVKKILQE 491
                +P+  LVST++  L  
Sbjct: 540 -----VPLDSLVSTIRDNLAA 555


>gi|183222581|ref|YP_001840577.1| histidyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912616|ref|YP_001964171.1| histidyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|229558692|sp|B0SH39|SYH_LEPBA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558693|sp|B0SQQ4|SYH_LEPBP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|167777292|gb|ABZ95593.1| Histidine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167781003|gb|ABZ99301.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase; HisRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 437

 Score =  231 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 113/489 (23%), Positives = 209/489 (42%), Gaps = 53/489 (10%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K+ KL  E  +G  D   +++R+RN +   ++++  +YG++  + P++E  D       +
Sbjct: 2   KEQKLTTENYKGTRDFYPEDMRLRNYLFSVMKDVVRSYGYEEYDGPMVESLDLYRAKTGE 61

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           E    K +++  D   + +++R ++T  +AR VA+    +  P R + I  ++R E+ G 
Sbjct: 62  E-IVGKQIYNFIDKGDREVAIRPEMTPTVARMVAKKLRELPRPIRWFSIPNLWRYEQPGH 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+  Q +VD  G ++  A+ E+  +  D L A G  +N + + I++R +LD  L   
Sbjct: 121 GRLREHWQLNVDMFGVTSSRAELEILSLACDILFAFGAPKNSFKVTISHRSLLDEFLLDG 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                ++ +E   +L   DK +K        L+ +                S  +  +  
Sbjct: 181 LKVSPNQAHEVSKIL---DKKNKITQDEYVALVTKTI-----------PNDSSAVSKIDL 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+         +  L +     E+    +  + E ++  G  S+ I    ++VRG +YY
Sbjct: 227 FLNAT-------VNSLNQIPGIKEETLAAIKGLFEDIKTIG-LSDIIHFDPSVVRGFDYY 278

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG ++E             P    S+ GGGRYD L+  F  + +   GF +G   L   L
Sbjct: 279 TGFIFEIFDTS--------PQNKRSLYGGGRYDNLIGLFSNEELTGIGFGLGDVTLQNFL 330

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +     N   +     +     D  S ++   + + LR   I AE+ L S K  G QL 
Sbjct: 331 TAHNLLPNFASDTT---VFIPLLDDSSFAENHNFAKELRKEKISAEVSLVSQK-MGKQLS 386

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           YA+++     +++G  E     + +KD+A                     Q T   SE +
Sbjct: 387 YAEKKGYRWILLRGEDEIKTNTVTLKDMASR------------------NQFTFSFSEAL 428

Query: 483 STVKKILQE 491
             +K+ L +
Sbjct: 429 QKIKEELSK 437


>gi|124267184|ref|YP_001021188.1| histidyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|124259959|gb|ABM94953.1| histidyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 443

 Score =  231 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 92/478 (19%), Positives = 178/478 (37%), Gaps = 62/478 (12%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K         +G  D    E        D++R + + YG+  + TP++E +    + L 
Sbjct: 8   AKTETSPLRAVKGMNDLLPPESARWEWFEDAVRRVMQRYGYAAVRTPIVEPTALFVRGLG 67

Query: 62  D-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +  D   K ++S  D+ +G  ++LR + TA + R V E+        R Y +G +FR+E+
Sbjct: 68  EVTDIVEKEMYSFTDNMNGDQLTLRPEGTAGVVRAVTEHSLLYEGGKRLYYLGAMFRHER 127

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND----YHIGINNRKIL 175
              GR+RQF Q   + +G      DAE+ +M       +G+            +   +  
Sbjct: 128 PQKGRYRQFHQAGAEALGFHGPDVDAELILMCRALWRELGLIEGRDLWLEINSLGQPEER 187

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
                 +  H +         L   D   +     +++L  +     +           +
Sbjct: 188 RAHRAALIAHLEAHA-----DLLDDDAKRRLHSNPLRILDTKTPVMQA---------VVD 233

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++ FL          +  ++                              +I+  +
Sbjct: 234 AAPRLIDFLGEASLAHFDAVRAVLDAAGL-----------------------PYRINPRL 270

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRG++YY   V+E +          +     +VGGGGRYD L+ +  G+  P  G+ +GI
Sbjct: 271 VRGMDYYNLTVFEWVT--------DRMGAPLTVGGGGRYDSLIEQLGGKPAPGVGWGLGI 322

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---G 412
            RL++ L ++   T         +       + +L    +  + LR  G    +      
Sbjct: 323 ERLLLLLDAVGVVTPPRLPDAYAV----LPAAAALPTAMVLIEALRAHGASVVLHPAGKD 378

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK----ELSREIKNNESW 466
              +  +Q K AD      A++ G  E ++GM+ +K L  G+    ++ R + +  +W
Sbjct: 379 GPASMKSQFKKADASGARHALVFGADELAQGMVALKPLRAGEGAATQVLRPLDDPAAW 436


>gi|311105360|ref|YP_003978213.1| histidyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310760049|gb|ADP15498.1| histidyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 431

 Score =  231 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 98/480 (20%), Positives = 186/480 (38%), Gaps = 64/480 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    RG  D          +  + +R     YG+  + TP+LE++    + + +  D  
Sbjct: 10  KVAAIRGMNDLLPGASARWEQFEEIVRGWLRGYGYRNVRTPVLEHTRLFARGIGEVTDIV 69

Query: 67  NKGVFSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D  D + +++R ++TA + R   E+      P R Y IGPVFR E+   GR+
Sbjct: 70  EKEMYTFADGPDEELLTMRPEMTAGIVRASIEHNLLYDRPQRVYSIGPVFRRERPQRGRY 129

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q DV+ +G +    DAE+ +M+A   + +G+      +    +           + 
Sbjct: 130 RQFHQIDVEALGFAGPDVDAELIVMLARLWKLLGLTDVRLELNSLGQPAERAAHRAALIE 189

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +K  + L      D   +     +++L  +                 +    +  FL 
Sbjct: 190 HLEKHRDILD----EDGQRRMYSNPLRVLDTKNPAMQEMA---------DSAPRLFDFLG 236

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +       + + +                              +++  +VRGL+YY   
Sbjct: 237 EESRAHFDGMCQRLTDA-----------------------GIEYRLNPRLVRGLDYYNLT 273

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G+V GGGRYDGL+    G++ PA GF+IG+ RL+   +  
Sbjct: 274 VFEWVT--------DRLGAQGTVCGGGRYDGLIELLGGKSAPAVGFAIGMERLLDLWEQ- 324

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +  +++     +  +    ++        + LR AG+   +  GS+  F +Q K AD
Sbjct: 325 ---SVQVEQQAECDVYVVHQGEEAQRLAARVGEDLRDAGLSVVVHAGSAG-FKSQFKRAD 380

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                +A+I G  E +     +K L    +                AQ  +P++ L   +
Sbjct: 381 ASGARVAVILGADEVAAQTASVKFLRADAQ-------------GETAQQQVPLAGLADVL 427


>gi|91203209|emb|CAJ72848.1| similar to histidyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 436

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 94/470 (20%), Positives = 178/470 (37%), Gaps = 51/470 (10%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK+    + PRG  D       +  ++ ++ R  +E  G+  I TP+ E +    + + +
Sbjct: 7   KKSGYVFKAPRGTEDVLPGNWDLWKKLEEAGRQEFELCGYYEIRTPVFEDTRLFVRSIGE 66

Query: 63  -EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKH 120
             D   K +++  D +   I+LR + TAP+ R   E         +  Y IGP FR E+ 
Sbjct: 67  ATDIVEKEMYTFSDSEDSSITLRPENTAPVMRAYLEYELHKTKKFQKYYYIGPQFRKERP 126

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR RQF Q  ++ VG++    D E   +     + +G+K  +  I          +  
Sbjct: 127 QAGRLRQFHQMGIEAVGANDPLLDVETIGVAVRIFDRIGLKGYNVKINSIGCNECRPVFR 186

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            I      +    L  L       +      ++L  + + +   + T        Q+  +
Sbjct: 187 NIIKDILCEREMALCEL----CQSRLHRNVFRIL--DCKNEKCKEVTH-------QLPPV 233

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             +L        + + E + G          L                       VRGL+
Sbjct: 234 NDYLCEKCRIHANSVREALVGIGIPYIADAHL-----------------------VRGLD 270

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E                  ++  GGRYD L++   G ++ A GF+IG+   I+
Sbjct: 271 YYTKTVFEIT--------HSSLGARDAICAGGRYDNLIADMGGPSIGAVGFAIGMEATIL 322

Query: 361 ALKS----LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           A+++     + S           +  +  D +          +LR +GI A++     ++
Sbjct: 323 AMQNVLNKKKQSVYLEINEPAPTVYIVSIDKEIKKHCFYLLNLLRKSGISADLDY-EGRS 381

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
              Q++ A++      ++ G  E  RG +++K +  G+E+        +W
Sbjct: 382 PKAQMRVANKLGVKYVLVLGPDELERGNVKVKIMETGEEVIVRQDEILNW 431


>gi|256845829|ref|ZP_05551287.1| histidyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719388|gb|EEU32943.1| histidyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 413

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 100/461 (21%), Positives = 186/461 (40%), Gaps = 57/461 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   +E +    I +  + ++ENYG++ ++TP+ E ++   + + +  D
Sbjct: 1   MKLIKAVRGTKDIIGEEAKKYVYISNVAQKMFENYGYNFVKTPIFEETELFKRGIGEATD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
              K +++ +D   + I+LR + TA L R   EN         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGDRSITLRPENTASLVRCYLENAIYAKEEISRFYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKI 182
           R R+F Q  ++  G  +   DAE+  +    LE +GI   +  I     K    I  EK+
Sbjct: 121 RQREFNQIGLEVFGEKSPKVDAEVIAIGYKFLEKLGITDLEVKINSVGSKESRTIYREKL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H    L++        D  D+     ++LL  +   D             +    ++ 
Sbjct: 181 IEHFSKHLDDM-----CDDCKDRINRNPLRLLDCKVDKDKDFY---------KSAPNIID 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  D  K   ++ + +                            +     T+VRGL+YY
Sbjct: 227 FLFEDERKHYEDVKKYL-----------------------NVFGIKYTEDPTLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E +          K    G+V GGGRYD L+     +++PA GF+ G+ R+++ L
Sbjct: 264 SSTVFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                            +       ++        + LR   I+  +     K   + +K
Sbjct: 316 GE-------NYPKNNPDVYIAWLGENTSETALKIAESLRDNDIKVYIDYSE-KGMKSHMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD+ +    II G  E ++G++ +KD +  ++   +I+  
Sbjct: 368 KADKLSVRYCIILGEDELNKGIVLLKDFSTREQKEVKIEEI 408


>gi|317403339|gb|EFV83852.1| histidyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 431

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 99/480 (20%), Positives = 187/480 (38%), Gaps = 64/480 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    RG  D          +  + +R     YG+  + TP+LE++    + + +  D  
Sbjct: 10  KVAAIRGMNDLLPGPSARWEQFEEIVRGWLRGYGYRNVRTPVLEHTRLFTRGIGEVTDIV 69

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D  +G+ +++R ++TA + R   E+      P R Y IGPVFR+E+   GR+
Sbjct: 70  EKEMYTFTDALNGESLTMRPEMTAGIVRASIEHNLLYDRPQRVYSIGPVFRHERPQRGRY 129

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q DV+ +G +    DAE+ +M+A   + +G+      +    +           + 
Sbjct: 130 RQFHQIDVEALGFAGPDVDAELIVMLARLWKLLGLTDVRLELNSLGQPAERAAHRAALIA 189

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +K  + L      D   +     +++L  +                 +    +  FL 
Sbjct: 190 HLEKHVDILD----EDGKRRLYTNPLRVLDTKNPAMQEMA---------DSAPRLFDFLG 236

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +       + + +                              +++  +VRGL+YY   
Sbjct: 237 EESRAHFDGVCQRLTDA-----------------------GIEYRLNPRLVRGLDYYNLT 273

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G+V GGGRYDGL+    G+  PA GF+IG+ RL+   +  
Sbjct: 274 VFEWVT--------DRLGSQGTVCGGGRYDGLIELLGGKPAPAVGFAIGMERLLDLWEQ- 324

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +  ++      +  +    D+        + LR AG+   +  G++ +F +Q K AD
Sbjct: 325 ---SVQVEAPAECDVYVVHQGEDAQRLAARVGEDLRDAGLAVVVHAGAA-SFKSQFKRAD 380

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                +A+I G  E +     IK L    +                AQ  +P++ L   +
Sbjct: 381 ASGARVAVILGADEVASQTASIKFLRADAQ-------------GDGAQQQVPLAGLADVL 427


>gi|330969069|gb|EGH69135.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 429

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 102/487 (20%), Positives = 187/487 (38%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVARLLDNYGYRQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +GI+                 
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGLLGIRNAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L       D+            D   +     +++L  +            
Sbjct: 177 RYREALVEYLSARLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRVHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRA 407
           GF++GI RL++ L++LE     I     V +       +  +L+  +     L T  +R 
Sbjct: 305 GFAMGIERLVLLLETLEQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDQLPT--LRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|153208827|ref|ZP_01947051.1| histidyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165921437|ref|ZP_02219625.1| histidyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212218662|ref|YP_002305449.1| histidyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|229558651|sp|B6J7Q5|SYH_COXB1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|120575678|gb|EAX32302.1| histidyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165916752|gb|EDR35356.1| histidyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212012924|gb|ACJ20304.1| histidyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 421

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 97/492 (19%), Positives = 185/492 (37%), Gaps = 78/492 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG +D   +EI   + + ++ R++   Y +  I  P++E +    + +
Sbjct: 1   MTKS----IQAIRGMSDTLPEEIPYWSFLENACRSVVSAYHYREIRFPVVEQTALFKRTI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEATDIVEKEMYTFTDRNGDSLTLRPEGTAGCVRAGIQNGLLYNQIQRLWYLGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    +AE+  M     +A+G++             +   L
Sbjct: 117 PQKGRYRQFYQLGVETYGMAGAPIEAELIFMCLRLWKALGLES-----------CIHLEL 165

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +G         + +V     +  +      + L                 L +E    
Sbjct: 166 NTLGTLDSRNAYRQALVTYLQSREKELDEDSRRRLHTNPLRILDSKNPDLQPLLAE-APK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L     +   +L  L+                               ++ T+VRGL
Sbjct: 225 LIDYLDETSRRHFDQLRSLLDQAEV-----------------------PFIVNPTLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT  V+E +          +    G+V  GGRYD LV    G++ PA GF+ G+ RL+
Sbjct: 262 DYYTHTVFEWVT--------DQLGAQGTVCAGGRYDNLVELLGGKSTPAAGFAAGLERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG----IRAEMFLGSSK 415
           + L+ ++           + I  +      + +  + T+ LR       I A++   S  
Sbjct: 314 LLLRGVQECL------DKIDIYVVIAGEAVIQEGLLMTEQLRNVLPEWVIEADL---SGS 364

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +  +Q K AD+     A++    E     + +K L                    V Q +
Sbjct: 365 SLKSQFKRADKSGAKWALVIAEEEIKTNTVTLKHLR-----------------ETVPQKS 407

Query: 476 IPISELVSTVKK 487
           +    L+  +K 
Sbjct: 408 LTRDTLIPYLKS 419


>gi|320011902|gb|ADW06752.1| histidyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 420

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 90/476 (18%), Positives = 179/476 (37%), Gaps = 69/476 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D           + ++I +  +N G+  IETP  E      + + +  D  
Sbjct: 3   TFQAPKGTYDLTPPRSAKFLAVREAISSPLKNSGYGYIETPGFEDVALFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
           +K +++ +   G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  SKEMYAFETKGGDKLALRPEGTASVLRAALEANLHKAGNLPVKLWYSGSYYRYERPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G+ +         D       R+ L 
Sbjct: 123 YRHFSQVGAEAIGTEDPALDAELIILADQAYRSLGLTQFRILLNSLGDKECRPVYREALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  + +    +  LR +D               + R D     T         
Sbjct: 183 TFLRDLDLDEETRRRIEINPLRVLD---------------DKRADVQKQLTG-------- 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  FL    +    E+ +L+       +   +L                       V
Sbjct: 220 APMLRDFLCDACKAYHEEVRDLLTAAGVAFEDDEKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     +         +  +    ++          LR AG+  +   G  + 
Sbjct: 309 RTVLALEAEGIELDIPASTS---VYAVPLGEEARRVLFGLVTELRKAGVATDFAFG-GRG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +K A+R      ++ G  + + G +Q+KD+  G++ +  + +  +  +A++A
Sbjct: 365 LKGAMKSANRSGARYTVVAGERDLAEGDVQLKDMESGEQEAVAVGDLVAVIQAKLA 420


>gi|256028560|ref|ZP_05442394.1| histidyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766480|ref|ZP_06525858.1| histidyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718035|gb|EFD82047.1| histidyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 413

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 101/466 (21%), Positives = 189/466 (40%), Gaps = 57/466 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   +E +    I +  + ++ENYG++ ++TP+ E ++   + + +  D
Sbjct: 1   MKLIKAVRGTKDIIGEEAKKYVYISNVAQKMFENYGYNFVKTPIFEETELFKRGIGEATD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
              K +++ +D   + I+LR + TA L R   EN         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGDRSITLRPENTASLVRCYLENAIYAKEEISRFYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKI 182
           R R+F Q  ++  G  +   DAE+  +    LE +GI   +  I     K    I  EK+
Sbjct: 121 RQREFNQIGLEVFGEKSPKVDAEVIAIGYKFLEKLGITDLEVKINSVGSKESRTIYREKL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H    L++        D  D+     ++LL  +   D             +    ++ 
Sbjct: 181 IEHFSKHLDDM-----CDDCKDRINRNPLRLLDCKVDKDKDFY---------KSAPNIID 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  D  K   ++ + +                            +    ST+VRGL+YY
Sbjct: 227 FLFEDERKHYEDVKKYLD-----------------------VFGIKYTEDSTLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E +          K    G+V GGGRYD L+     +++PA GF+ G+ R+++ L
Sbjct: 264 SSTVFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                            +       ++        + LR   I+  +     K   + +K
Sbjct: 316 GE-------NYPKNNPDVYIAWLGENTSETALKIAESLRDNDIKVYIDYSE-KGMKSHMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            AD+ +    II G  E ++G++ +KD +  ++   +I+   +  +
Sbjct: 368 KADKLSVRYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIVNQIK 413


>gi|329113395|ref|ZP_08242176.1| Histidyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326697220|gb|EGE48880.1| Histidyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 427

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 110/470 (23%), Positives = 193/470 (41%), Gaps = 64/470 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D   ++ R    ++D+ R I   YGFD   TP+ E +    + L D  D  +
Sbjct: 15  IQPVRGTHDLIGEDQRRHAHVVDTARRIAGVYGFDEWATPIFEDTRVFSRSLGDTSDVVS 74

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++S  D DG+ ++LR + TA + R +  N  T   P + +  GP+FR+E+   GR+RQ
Sbjct: 75  KEMYSFSDRDGESLTLRPEGTAAICRALVTNALTQSLPQKVFYAGPMFRHERPQKGRYRQ 134

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKI 182
           F Q   + +G++   ADAE   M  + L+A+GI        +      +R      L   
Sbjct: 135 FHQIGAELLGAAEPLADAEAIAMGYEVLKALGIADYVTLELNTLGDAASRDAWRDALVAY 194

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                DKL+E        D L +     +++L  +   D          +      +M  
Sbjct: 195 FSAHKDKLSE--------DSLTRLEKNPLRILDSKDAGDK---------VLVADAPMMAE 237

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+                       + +L    ++            ++ +IVRGL+YY
Sbjct: 238 FLT-----------------PEARTFWEDLRNKLDVF------GIAYTVNPSIVRGLDYY 274

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +          +    G+V  GGRYDGLV +  G  VPA G++ GI RL + L
Sbjct: 275 NHTTFEFVTN--------RLGSQGTVLAGGRYDGLVKQMGGPEVPAIGWAAGIERLSMLL 326

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + + ++  +        +  +   +   S      Q LR  G+R E+      +   +++
Sbjct: 327 EQVPAAPRS--------VVLVPVGAPDESAVVQILQGLRGQGVRTEIGYKG--SLRKRME 376

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A ++N    +  G  E ++G+ ++K++  G E         S  +   A
Sbjct: 377 RAGKQNASHVLFLGEDELAKGLFRVKNMETGAEQEVSRDTLLSKAQDVFA 426


>gi|73670890|ref|YP_306905.1| histidyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|72398052|gb|AAZ72325.1| histidyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 409

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 100/459 (21%), Positives = 175/459 (38%), Gaps = 53/459 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRG  D    +   R  +   +R++   +G+  I TP  E+ D       +    
Sbjct: 1   MTVNRPRGTRDFLPADTARRRYVESVMRDVARKWGYSEIITPTFEHLDLFTLKSGEGIIG 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +++  D  G+ ++LR +LTAP+ R           P + +     FR E+   GRFR
Sbjct: 61  --ELYNFTDKGGREMTLRPELTAPVMRLYINELQPFPKPLKLFYFENCFRYERPQKGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +GS    +DAE+  +    L+A G+K +     +   + L   LE      
Sbjct: 119 EFWQFGVELIGSGKPDSDAEVIALADAMLKAAGVKGDMKLGNLAVIRTLLSGLE------ 172

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                    V+R +DK +  GL+ +   +                   +    +   + +
Sbjct: 173 ---PEIVSKVMRLVDKKEYAGLEALLEEI---------------GAEEQLKSDLFHLIKL 214

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + ++ + E+ ++V           ELV   + ++          +   I RGL+YYTG V
Sbjct: 215 EGKRILPEVIKIVGNIP-------ELVSFEKTLKLLDAYGVDYSLDFGIARGLDYYTGMV 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E           +       V GGG Y  L+  F G +VP+TGF IG  R++       
Sbjct: 268 FEVY--------AEGLGAQKQVCGGGSY-QLIKLFGGGDVPSTGFGIGFDRIMEI----- 313

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                           +    D   K   +   LR   +   + L   +NF  QL YA+ 
Sbjct: 314 ----CPLTPPAPKTLMLISKPDLHLKAIGFANKLRKY-VPVHVDL-MQRNFKAQLSYANT 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            N    +I G  E   G L ++D+  G++    ++    
Sbjct: 368 INADYVVIVGEKELEVGKLTLRDMVSGEQELLTLEEIIE 406


>gi|331224112|ref|XP_003324728.1| histidyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309303718|gb|EFP80309.1| histidyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 592

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 133/533 (24%), Positives = 224/533 (42%), Gaps = 79/533 (14%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
           TK + ++P+G  D   KE+ IR +I  +I  I++ +G   I+TP+ E  + L     ++ 
Sbjct: 87  TKFQLKVPKGTKDHHPKEMLIREKIFSTITRIFKLHGAVTIDTPVFELKEILSGKYGED- 145

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GP 122
             +K ++ LQD  G+  SLRYDLT P AR++A N        + Y I  V+R ++     
Sbjct: 146 --SKLIYDLQDQGGELCSLRYDLTVPFARFLAMNSKEYPS-IKRYHIAKVYRRDQPAMTK 202

Query: 123 GRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           GR R+F QCD D    +    ADAE+  +  + LEA+  +   + I +N+RK+LDGI + 
Sbjct: 203 GRMREFYQCDFDIAGATDPMIADAEVLTIACEVLEAL--EVGPFTIKLNHRKLLDGIFDL 260

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  D    +   +  A+DKLDK     V+  + E              L  +  D + 
Sbjct: 261 CGVPED----KFRAISSAVDKLDKMAWIDVRKEMTEE-----------KGLDPQIADRIG 305

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +   + +       + +      ++G  E+ ++   +   G    RI    ++ RG
Sbjct: 306 EYVKLKGSEDLLAQLFEDQTLVANKTAKEGLEEMKLLMSYMNVFGIMP-RISFDLSLARG 364

Query: 299 LEYYTGCVYEAILGFPVMNEKQKP------------------------------------ 322
           L+YYTG +YEA++       K+                                      
Sbjct: 365 LDYYTGVIYEAVVEGSAPPVKEATASAPMTTEEAVGGPSSKARSTKAKRDETGEAAEIDD 424

Query: 323 ---VVFGSVGGGGRYDGLVSRFK--GQNVPATGFSIGISRLIVALKSLESSTNNIK-EMG 376
              +  GS+  GGRYD LV  F      +P  G S G+ R+   LKS  +          
Sbjct: 425 ESQIGVGSIAAGGRYDNLVGMFSAGKDKIPCVGISFGVERIFSILKSKAAQNRIDNLRGK 484

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V +  M      L +     + L  AG+ AE    S      Q +  DR     AII G
Sbjct: 485 DVDVFVMSVGDGLLVERMKLCKELWDAGLSAEFMYKSKPKTQKQFEIVDRDQIRFAIILG 544

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
             E   G ++IK     +++ +E   +   +      + +  S+++S +K+ L
Sbjct: 545 PEELKSGHVRIK-----EQVGKESNLHAQDKSG----VVVERSQMISLLKERL 588


>gi|308452654|ref|XP_003089127.1| hypothetical protein CRE_23243 [Caenorhabditis remanei]
 gi|308243115|gb|EFO87067.1| hypothetical protein CRE_23243 [Caenorhabditis remanei]
          Length = 579

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 130/476 (27%), Positives = 220/476 (46%), Gaps = 48/476 (10%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLP 61
           K  K   +  +G  D    +  +RN +L ++   +  YG + I+TP+ E  D L GK+  
Sbjct: 54  KPGKFVLKTGKGTRDYGPAQSALRNSVLQNVVETFNKYGAETIDTPVFELRDVLMGKYGE 113

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH- 120
           +     K V+ LQD  G+ +SLRYDLT P ARY+A N    +     Y+I  V+R ++  
Sbjct: 114 EG---GKLVYDLQDQGGELLSLRYDLTVPFARYLAMNK---ITNITRYQIAKVYRRDQPV 167

Query: 121 -GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F QCD D  G          C+ +   L    ++  ++ I +N+R IL+G+ 
Sbjct: 168 MTRGRYREFYQCDFDIAGQYDLMLPESECLGIVHELLT-KLEIGEFFINLNHRLILEGMF 226

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+   D       +  ++DKLDK     V+  + + +            LT EQ + 
Sbjct: 227 AVSGISPKD----FKTICSSVDKLDKTQWAEVEEEMIKEKF-----------LTKEQTEK 271

Query: 240 MVSFL-------SIDLEKSMHELYEL--VKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           +   +        +   + + ++ +L  +      +KG  EL V+   +   G  S R +
Sbjct: 272 LGQLVRFRELNSGLSNLELLEKMSQLPELGQNEKFKKGAEELKVLIGYLDVDGVTSVRYE 331

Query: 291 ISSTIVRGLEYYTGCVYEAILG--------FPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
            S  + RGL+YYTG +YEA+                  +PV  GSV  GGRYDGLV+ F 
Sbjct: 332 PS--LARGLDYYTGAIYEAVAPKALEGTAVEKSEETAGQPVGVGSVAAGGRYDGLVNMFD 389

Query: 343 GQ-NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
            +  VP  G S GI RL   +++ +    N        +       + + + +   + LR
Sbjct: 390 AKLKVPCCGVSFGIERLFAIMEARQK---NTVRTTQTEVYVASAQKNLVLERKKLLRTLR 446

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            AGI++EM L ++     Q +YA+ R  PL ++ G  E   G+++++++   +E +
Sbjct: 447 AAGIKSEMPLKANPKLLTQFQYAEERRIPLVVLIGERELQEGIVKLRNVVSREEKA 502


>gi|162147698|ref|YP_001602159.1| histidyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542322|ref|YP_002274551.1| histidyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|189082297|sp|A9HJ49|SYH_GLUDA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|161786275|emb|CAP55857.1| Histidyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209529999|gb|ACI49936.1| histidyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 415

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 105/467 (22%), Positives = 185/467 (39%), Gaps = 64/467 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D   +       ++++ R I   YGFD   TP+ E +    + L D  D  +
Sbjct: 4   LQPVRGTHDLIGETQLRHAHVVETARRIAGLYGFDEWATPIFEDTRVFARSLGDTSDVVS 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++S +D  G+ ++LR + TA + R +  N  T   P + +  GP+FR E+   GR+RQ
Sbjct: 64  KEMYSFEDRGGESLTLRPEGTAGVCRALVTNGLTQSLPQKVFYAGPMFRYERPQKGRYRQ 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKI 182
           F Q   + +G++   ADAE   M  D L+A+GI        +      +R      L   
Sbjct: 124 FHQIGAELIGAAEPLADAEAIAMGRDVLKALGIADETILDLNTLGDTESRAAWRTALIGY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D+L++        D   +     +++L  +   D +                + +
Sbjct: 184 FTECRDQLSD--------DSRARLERNPLRILDSKAPQDRA---------LVADAPRIGA 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ +       L   +                              + +  IVRGL+YY
Sbjct: 227 FLTPEAVAFWDGLRSALD-----------------------LMGVPFRENPGIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +         ++    G+V  GGRYDGLV+   G   PA G++ GI RL + L
Sbjct: 264 GHTAFEFVT--------ERLGAQGTVLAGGRYDGLVAEMGGPRTPAIGWAGGIERLSMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +  ++           +  +     ++    +  Q LR  G+RAE+    +     +L+
Sbjct: 316 DATPAAPRP--------VAVVPMGEGAMGAAILLLQALRAGGVRAEIAYRGNT--KKRLE 365

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            A+R     A++ G  E +RG+ Q+K L  G +    +     +   
Sbjct: 366 RANRIGATHAVLIGEDEVARGVAQVKALDDGSQAELALDAVTPYLAG 412


>gi|218282368|ref|ZP_03488650.1| hypothetical protein EUBIFOR_01232 [Eubacterium biforme DSM 3989]
 gi|218216654|gb|EEC90192.1| hypothetical protein EUBIFOR_01232 [Eubacterium biforme DSM 3989]
          Length = 458

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 99/473 (20%), Positives = 195/473 (41%), Gaps = 58/473 (12%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            ++  ++PRG  D    +      +  ++R+    Y +D I TP+ E+++   +     D
Sbjct: 21  KRMAYQIPRGCQDVFGSDSYKWQALEQTLRSFCYMYNYDEIRTPIFEHTEVFKRENDSSD 80

Query: 65  RPNKGVFSLQ-DDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHG 121
             NK +++ + ++    ++LR + TA + R   EN            Y +GP+ R+E+  
Sbjct: 81  MVNKEMYTFKLENSKTSLTLRPEGTAGVVRSFVENKMYANPDLPAKFYYMGPMSRHERPQ 140

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDG 177
            GR R F Q  V+ +G  +   D E  ++    L+++G+      +       +R     
Sbjct: 141 KGRMRIFNQFGVEALGVKSPYVDVETIVLAFSILKSLGLNDIKVCLNTLGDDESRANYRS 200

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            L++      D+L          D   ++    +++L  + + D+  +  K A       
Sbjct: 201 ALKEYFAPYVDEL--------CSDCKRRYEQNPLRIL--DCKVDHDHECMKNA------- 243

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             M  +L+   ++  + + EL+       +  ++L                       VR
Sbjct: 244 PKMSDYLNEASQEYFNTVCELLDKLEIPYEVDDKL-----------------------VR 280

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-VPATGFSIGIS 356
           GL+YYT  V+E +     M          +V  GGRYDGL+S F G   +   G+++G+ 
Sbjct: 281 GLDYYTHTVFEIVSMNSEM------GAQSTVLAGGRYDGLISYFGGPEGMSGIGWALGME 334

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL++AL++          +       M  D ++ +        LR  G R +M +   ++
Sbjct: 335 RLLIALEAEGIELETKPALDA---YVMCLDPEARTYAFEVLTSLRAYGYRCDMDMME-RS 390

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           F  Q K  DR    LAI+ G  E     + +K++A  ++ S E++    + ++
Sbjct: 391 FKAQFKAVDRSKAKLAILIGKSELEEKKVTVKNIAHKEQESIEVEKLIPYVDS 443


>gi|168065065|ref|XP_001784476.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663951|gb|EDQ50689.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 431

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 114/463 (24%), Positives = 204/463 (44%), Gaps = 40/463 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           +T++  + PRG  D P +++R+R  + D  R +   + F+ ++ P++E  D   +   +E
Sbjct: 2   QTQITTDPPRGTRDFPPEDMRMRTWLFDKFREVSRLFAFEEVDFPMVESEDLYTRKAGEE 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
                 +++ +D  G+ ++LR +LT  LAR V +      FP + + IG  +R E+   G
Sbjct: 62  IVG--QLYNFEDKGGRKVALRPELTPSLARLVLQKGRAQSFPLKWFAIGQCWRYERMTRG 119

Query: 124 RFRQFIQCDVDNVGSSAETADA---EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           R R+  Q ++D +G     A +   E+   +      + I  +D  I ++NRK+L  +LE
Sbjct: 120 RRREHYQWNMDIIGVPGVEASSAEAELLSAIVTFFTKLNITSDDVGIKVSNRKVLQAVLE 179

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K  +  D        V   +DKLDK   + ++  L +            A + S  I+ +
Sbjct: 180 KYDIQPDS----FAAVCVIVDKLDKLPREEIESELDK------------AGVPSVAIEGI 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L++     +    E + G  +G     EL  +  L    G   + ++  +++VRGL 
Sbjct: 224 LQALTLQSFDDL----EALIGAESG--AVAELKQLFALAEGYGI-QDWLRFDASVVRGLA 276

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA           K     ++ GGGRYD L+S + GQ+ PA GF  G + ++ 
Sbjct: 277 YYTGTVFEAF---------DKEKKLRAICGGGRYDRLLSTYGGQDTPACGFGFGDAVIVE 327

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            LK  +       E+  V    M  D             LR+ G   E+ +   K     
Sbjct: 328 LLKEKKLLRAFPHEVDDV---VMALDDSLKIPAAGIASRLRSTGRVVELVIEKGKKMKWV 384

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            K+ +       ++ GT E   G + +KDL   ++  + +   
Sbjct: 385 FKHCETLKAKRLVLLGTTEWKEGKVLVKDLNLREQTVKTVDEL 427


>gi|332686838|ref|YP_004456612.1| histidyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370847|dbj|BAK21803.1| histidyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 429

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 95/461 (20%), Positives = 179/461 (38%), Gaps = 50/461 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D           I ++ R ++++Y +  I TP+ E  + + + + D  D 
Sbjct: 1   MKYQRPKGTNDLLPSMSEKWQFIEETARLLFKDYQYKEIRTPIFENYEVIARSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
            +K ++   D   + I+LR + TAP+ R   EN         P +TY +GP+FR E+   
Sbjct: 61  VSKEMYDFYDKGDRHITLRPEGTAPIVRSFVENKLFGPEYAKPYKTYYMGPMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR RQF Q  ++  GS     D E   M  D    +GIK+    I     K       + 
Sbjct: 121 GRLRQFHQIGIETFGSENPAIDVEGMAMALDYFNQLGIKQIKLVINSLGDKETRTNYRQA 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +   + L    + D   +     +++L  + + D              +   ++ 
Sbjct: 181 LIDYLEPRIDEL----SEDSRRRLYNNPLRVLDSKDKKDQF---------VVSEAPSILD 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +LS   +     +  ++       +  + +                       VRGL+YY
Sbjct: 228 YLSEKSKVHFDTVINMLNALNITYEIDSNM-----------------------VRGLDYY 264

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  ++E +   P M          S+  GGRYDGLV    G      GF++G+ RL++ +
Sbjct: 265 TNTIFEIMSEAPGM------GAQASICAGGRYDGLVEELGGPATSGFGFAMGVERLLLTM 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ +     I     + +  +    ++  +     Q +R  G  A+     ++    Q K
Sbjct: 319 EAEQL---TIPSADYLDVYVVGIGEEANLESLKLVQAIRNFGFSADRDF-MNRKPKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD+    L +  G+ E     ++I+ L   KE +      
Sbjct: 375 TADKLKAQLVLTIGSEELLERNVKIRSLKDHKEQTFSFDEV 415


>gi|66044497|ref|YP_234338.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|81308465|sp|Q4ZX22|SYH_PSEU2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|63255204|gb|AAY36300.1| Histidyl-tRNA synthetase, class IIa [Pseudomonas syringae pv.
           syringae B728a]
          Length = 429

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 101/487 (20%), Positives = 185/487 (37%), Gaps = 73/487 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +      ++  + +NYG+  I  P++E+++   + +
Sbjct: 1   MSKS----LQAIRGMNDILPEQTPLWRHFEGTVARLLDNYGYRQIRMPIVEFTELFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +G  ++LR + TA   R V E+  T      + + IGP+FR+E
Sbjct: 57  GEVTDIVEKEMYTFADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           +   GR+RQF Q  V+         DAE+ +M       +G                   
Sbjct: 117 RPQKGRYRQFHQIGVEVFNLDGPDIDAELIVMTWRLWGLLGIRDAVKLELNSLGTSEARA 176

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
             R+ L   L       D+            D   +     +++L  +            
Sbjct: 177 RYREALVEYLSARLDQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQ 217

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L       +  +L  +       L   +                              
Sbjct: 218 AVLVD--APKLADYLDDESRVHFEGLKARLDAA-----------------------GIPY 252

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            I+  +VRGL+YY+  V+E +          +    G+V  GGRYDGLV +  G+     
Sbjct: 253 VINPKLVRGLDYYSKTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGV 304

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRA 407
           GF++GI RL++ L++LE     I     V +       +  +L+  +     L T  +R 
Sbjct: 305 GFAMGIERLVLLLETLEQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDQLPT--LRL 362

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESW 466
           ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +         
Sbjct: 363 QVNAGAG-SFKSQFKKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEH 421

Query: 467 REARVAQ 473
             + V Q
Sbjct: 422 LASCVVQ 428


>gi|294811572|ref|ZP_06770215.1| histidyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294324171|gb|EFG05814.1| histidyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 426

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 94/484 (19%), Positives = 178/484 (36%), Gaps = 70/484 (14%)

Query: 1   MGKKTKLR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M ++T +   + PRG  D    +      + ++I    +N G+  +ETP  E  +   + 
Sbjct: 1   MTRETPVTTFQAPRGTYDLLPPDSATFLAVREAIAAPLKNSGYGYVETPGFEAVELFARG 60

Query: 60  LPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF--PCRTYRIGPVFR 116
           + +  D   K +++ +   G  ++LR + TA + R   E         P + +  G  +R
Sbjct: 61  VGESTDIVTKEMYAFETKGGTKLALRPEGTASVLRAALEANLHKQGVLPVKLWYSGSYYR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIG 168
            EK   GR+R F Q   + +G+     DAE+ ++      ++G++          D    
Sbjct: 121 YEKPQKGRYRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLRHFRILLNSLGDQECR 180

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
              R+ L   L  + L  + +    +  LR +D         V+  L             
Sbjct: 181 PVYREALQEFLRGLDLDEETRRRVEINPLRVLDDKRP----EVRRQLT------------ 224

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
                      +   L         E+ EL+       +   +L                
Sbjct: 225 -------GAPSLRDSLCDGCRAYHQEVRELLTEAGVSFEDDEKL---------------- 261

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
                  VRGL+YYT   +E +                +VGGGGRYDGL     G  +P+
Sbjct: 262 -------VRGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMLGGPALPS 306

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G+++G+ R ++AL++   S           +  +    ++          LR AG+ A+
Sbjct: 307 VGWALGVDRTVLALQAEGVSLELPPATS---VFAVPLGEEARRALFGVVTRLRRAGVAAD 363

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G  +     +K A R      ++ G  + + G++Q+K++  G++    +        
Sbjct: 364 FAYG-GRGLKGAMKVAHRSGARYTVVAGERDLAEGVVQLKNMESGEQRPVPLSTVVDELG 422

Query: 469 ARVA 472
           A +A
Sbjct: 423 ALLA 426


>gi|299143683|ref|ZP_07036763.1| histidine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518168|gb|EFI41907.1| histidine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 437

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 131/471 (27%), Positives = 203/471 (43%), Gaps = 37/471 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     ++     GF +   KE  + N ++D+IR  +E +GF PI+TP +E S+ L    
Sbjct: 1   MA--QIVKPSTLPGFMELLPKEQILFNEMMDTIRKNFEKHGFLPIDTPAIEKSEVLLAKG 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             E    K ++         +SLR+DLT PLARY  E+F+ + FP R Y IG V+R EK 
Sbjct: 59  GGE--TEKQIYRFT-KGDTDMSLRFDLTVPLARYTVEHFNDLSFPFRRYHIGKVYRGEKA 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFR+F QCD+D +G+       +    +        +  +D+ I INNRKIL G  E
Sbjct: 116 QKGRFREFYQCDIDTIGNEKLDILNDAEFPVVIYHTFKDLGFDDFTIRINNRKILKGFFE 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + +         + VLRA+DK+DK G + VK  L +              +  +    +
Sbjct: 176 SLNILDS------VDVLRAVDKIDKIGREKVKEELCDN------------GIEEDIAVKI 217

Query: 241 VSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F+ I     +    L  L        +G +EL  + + + +         +   I RG
Sbjct: 218 IDFILISGTNSEIFDALDRLEIDNEIFNEGLSELKQVVKYITEFAVPEKNFTVDLKIARG 277

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG VYE  L              GSV  GGR+D L S +  + +P  G SIG+SRL
Sbjct: 278 LDYYTGTVYETTLDNYS--------NVGSVCSGGRFDNLASYYTDKKLPGVGLSIGLSRL 329

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              L   +      K +  +++  M    D   +       LR  GI   ++        
Sbjct: 330 FYQLNEAKIIEAKKKSLIDLIVIPMTGFVD---EAIKLVSKLRDGGINTIIY-TEDAKIA 385

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            + KYA+    P  ++ G  E       +KD+  G +    +    S  + 
Sbjct: 386 KKFKYANALEVPYTLVVGENEVKTEKYALKDMVTGNQEELSLSEIISRIKE 436


>gi|110667082|ref|YP_656893.1| histidyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121689465|sp|Q18DQ2|SYH_HALWD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|109624829|emb|CAJ51237.1| histidine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 434

 Score =  230 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 117/464 (25%), Positives = 193/464 (41%), Gaps = 35/464 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF D    E+  R +++D +      YGF  + TP LE +        +     + +++
Sbjct: 6   KGFRDFYPPEMTARRQVIDILETTATQYGFREVGTPTLEQTQMYVDKSGEG--IEEELYA 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             DD G+ ++L  +LT  +AR V +    +  P +     P +R E+   GRFR+F Q +
Sbjct: 64  FSDDGGRDVTLIPELTPTVARMVVDKQQALSKPIKWVSTRPFWRYEQVQQGRFREFYQTN 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD  G++   ADAE+    AD L  +G+  +D+   +++R IL G+L  I    DD   +
Sbjct: 124 VDIFGTADPIADAEILAFAADALRNLGLTASDFEFRVSHRDILSGLLASITN--DDADID 181

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               +RA+DK  K        LL +            A L+ +Q       L+      +
Sbjct: 182 TRAAIRAVDKRAKIEQAEYHGLLTD------------AGLSYDQAQSFDDLLTTADLDEI 229

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             +     G          L  +   V   G       IS T  RGL+YYTG V+E    
Sbjct: 230 ATV-----GNDIVTTAVQNLRSVLAAVDDLGVGE-FCDISLTTARGLDYYTGVVFECFDA 283

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              ++         SV GGGRYD L+  F GQ  PA G + G++ L +  +         
Sbjct: 284 TGEVS--------RSVFGGGRYDNLIESFGGQPTPAVGVAPGLAPLSLLCQRAGVWPTEE 335

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 ++T      D+ S      + LR      E+ + + ++FG Q+ YAD  N    
Sbjct: 336 LTTDYYILTV----GDTRSVATRIARELRVNKNTVEIDI-ADRSFGAQMGYADSINAETV 390

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           II G  +     + IKD+  G + +  ++      +A   +  +
Sbjct: 391 IIVGERDLENDEITIKDMNSGDQTTVPVEAFPGDHDAPTYEDVV 434


>gi|78047428|ref|YP_363603.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|123743989|sp|Q3BUG0|SYH_XANC5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|78035858|emb|CAJ23549.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 482

 Score =  230 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 139/515 (26%), Positives = 224/515 (43%), Gaps = 73/515 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQDDDGQ-----------------WISLRYDLTAPLARYVAENFDTIVFPCRT 108
               V+ +Q                       ++LR+DLT PLARYVAE+   + FP R 
Sbjct: 62  ---QVYFVQSTGALANAAAAADAGGENGGLPELALRFDLTVPLARYVAEHEHELSFPFRR 118

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ + 
Sbjct: 119 YQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQ 178

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           +NNRK+L G     G+   ++   + +VLR +DKLDK   + V+  L             
Sbjct: 179 LNNRKLLRGFFHAQGVVDAEQ---QALVLREVDKLDKRSAEDVRATL----------MGP 225

Query: 229 GANLTSEQIDIMVSFLSIDLEKS----------MHELYELVKGTIAGEKGFNELVVISEL 278
              L  + +  ++ F  I               ++E+     G      G ++L  + EL
Sbjct: 226 DFGLAEDAVRRILDFAKIRSVSHADALDKIDWVVNEVQSRSGGNEDLHAGADDLREVLEL 285

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
           V+  G   +   ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L 
Sbjct: 286 VKALGVPESAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYESLA 337

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           S +    +P  G SIG++RL   L+         +     ++  M  D   L       +
Sbjct: 338 SHYTKSKLPGVGISIGLTRLFWQLREAGLIQGIAESSVQAMVALM--DETRLDDALDIAR 395

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            LR  GI  E+ +   K  G Q +YA R      ++ G  E +RG++ +KDL   ++   
Sbjct: 396 RLRIGGINTEVQM-EPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ--- 450

Query: 459 EIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                         Q  +   EL ST++  L++ +
Sbjct: 451 --------------QFDVARDELASTLQVELEQAR 471


>gi|299135512|ref|ZP_07028696.1| histidyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298601636|gb|EFI57790.1| histidyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 446

 Score =  230 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 93/490 (18%), Positives = 174/490 (35%), Gaps = 71/490 (14%)

Query: 2   GKK-TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
            K   +   +  RG  D    +  + NR+  + R ++  YGF  I TP+ E ++   + +
Sbjct: 6   NKPAPRPTIKAVRGTRDLLPDQTPLWNRVEATARAVFSRYGFGEIRTPVFEATELFARGV 65

Query: 61  P-DEDRPNKGVFSLQDD------DGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIG 112
             + D  +K +F+ +D         Q ++LR + TA + R   E+         + Y IG
Sbjct: 66  GEETDIVSKEMFTWEDRARAASEKAQNLTLRPESTAGVVRAYIEHKLGETGQLQKLYYIG 125

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA-----EMCMMMADTLEAVGIKRN---- 163
           P FR E+   GR+RQF Q   + +G     A++     E+  M+A  L+ +GI+      
Sbjct: 126 PQFRRERPQRGRYRQFWQIGAEVIGPQTSGAESPLRDAEVLEMLASLLDELGIRDWKLEL 185

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
           +      +R   +  L +      D++          D   +     +++L  +   D  
Sbjct: 186 NSVGNAEDRARFNVALREALAPVKDRM--------CPDNQRRAETNPLRVLDSKEEADQE 237

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                        +  +  +L  +  +   ++   +                        
Sbjct: 238 ---------IINALPKIADYLGDESREHFEQVKAALDA---------------------- 266

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
                  ++  +VRGL+YYT   +E  +               ++ GGGRYDGL     G
Sbjct: 267 -CGVPYHVNPRLVRGLDYYTRTTFEFTVTTG-------LGTQNALLGGGRYDGLSEMLGG 318

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNI----KEMGPVLITTMDHDSDSLSKYQMYTQM 399
              P  GF+IG  RLI+ L++   +             + +                 + 
Sbjct: 319 PKAPGIGFAIGEDRLILTLQAQAEADAAASGIAPTEPKLDVYIAPLGIAQNPAALKLARE 378

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+  E+    S   G    +AD+      I+ G  E    +L +K  + G+++   
Sbjct: 379 LRREGLSVEVG-DGSFKIGKSFGFADKL-ARHIILLGEDEVVTNVLTVKTFSTGEQVKVN 436

Query: 460 IKNNESWREA 469
                     
Sbjct: 437 RDVLADTLRG 446


>gi|33152173|ref|NP_873526.1| histidyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|39932105|sp|Q7VME1|SYH_HAEDU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|33148395|gb|AAP95915.1| histidyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 423

 Score =  230 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 99/475 (20%), Positives = 196/475 (41%), Gaps = 56/475 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  DC T E  +   +  ++RN+  +YG+  +  P++E +    + +
Sbjct: 1   MAK----TIQAIRGMNDCATTESPLWQWVESNVRNVLASYGYSEVRMPIVESTPLFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + ++LR + TA   R   ++        R + +GP+FR+E+
Sbjct: 57  GEVTDVVSKEMYTFWD-NDEQLTLRPEGTAGCVRAAIQHGWIYNNEQRLWYMGPMFRHER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    DAE+ ++ A   +A+GI   + H+ +    I     
Sbjct: 116 PQKGRYRQFHQAGVEVFGIANPEIDAELILLTARLWQALGI---EQHLSLQLNSIGSLAA 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                            L   ++ ++     +++L  + +                    
Sbjct: 173 RANYRAALVDFLANHTALMNDEEKERLVKNPLRILDTKNQA---------LQAVLNDAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L  +  +   +L +L+                            R +++  +VRGL
Sbjct: 224 LLDYLDEESRQHFAQLCQLLDA-----------------------MGIRYEVNPKLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +               G+V GGGRYDGLV +  G      GF+IG+ RL+
Sbjct: 261 DYYNKTVFEWVTSA--------LGSQGTVCGGGRYDGLVEQLGGHATQGVGFAIGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ +  + +  K    V I  +    ++  K     + +R A   +R  M   S  NF
Sbjct: 313 LLVQEVNKTMSLPKA---VDIYLVYAGDNTTLKAFQIAEQIRNALPQLRV-MTHCSGGNF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARV 471
             Q K AD+    +A++ G  E +   + +K+L    +++S +  +  +    R 
Sbjct: 369 KKQFKRADKVEAKIALVIGESELATQTIVLKELQNSSEQISIDQADLLAELSKRF 423


>gi|281208759|gb|EFA82934.1| histidine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 509

 Score =  230 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 127/490 (25%), Positives = 206/490 (42%), Gaps = 53/490 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              + P+G  D   +++ IR  + D+++  ++ +G   IETP+ E  ++L     ++   
Sbjct: 44  FTLKTPKGTQDYSPEQMTIREELFDTLKTCFKRHGAVTIETPVFELKETLTGKYGED--- 100

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++ LQD  G+  SLRYDLT P ARYVA N    +             N     GRFR
Sbjct: 101 SKLIYDLQDQGGEICSLRYDLTVPFARYVAMNRIRNIKRYHIA-RVYRRDNPVMTKGRFR 159

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D  G          C+ +   +    IK  +Y I +N+R++LD I    G+  
Sbjct: 160 EFYQCDFDIAGEYDLMIPDAECIKLICEILD-QIKVGNYLIKLNHRRLLDAIFAICGVPE 218

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D    +   +  A+DKLDK     V+  + + +            L     D + +F+ +
Sbjct: 219 D----KFRSICSAVDKLDKSPWDEVRKEMVDVKH-----------LDPAVADKIKTFVEM 263

Query: 247 DLE--KSMHELYE--LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           + +  + +  + +  L            EL  +   +R  G  ++++    ++ RGL+YY
Sbjct: 264 NGKPFEMLERIRKSGLCDSNQDALAVLKELDTLFGYLRCLGV-ADKVSFDLSLARGLDYY 322

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YEA++              GS+  GGRYDGLV  +    VP+ GFSIGI R+   L
Sbjct: 323 TGIIYEAVVTDSDR---------GSIAAGGRYDGLVGMYGSLQVPSVGFSIGIERIFSIL 373

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +                   +  D +  + +       L  AGI AE    S+ N   Q 
Sbjct: 374 EEEALKNKKKIRQNATQAYVVQLDKEGDMEERLKICNDLWNAGINAEFTYRSTPNSRKQF 433

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             A     P+AI+ G+ E     L+IK +   +E                    IP    
Sbjct: 434 DAARDLQVPIAIMFGSSEIETQALKIKVIETSEE------------------FIIPREGF 475

Query: 482 VSTVKKILQE 491
              VK+IL+E
Sbjct: 476 TDKVKEILKE 485


>gi|238021957|ref|ZP_04602383.1| hypothetical protein GCWU000324_01862 [Kingella oralis ATCC 51147]
 gi|237866571|gb|EEP67613.1| hypothetical protein GCWU000324_01862 [Kingella oralis ATCC 51147]
          Length = 431

 Score =  230 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 105/498 (21%), Positives = 186/498 (37%), Gaps = 92/498 (18%)

Query: 8   RAELPRGFADCPTKEIR-------IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E +             + ++   + +G+  I TP++E+++   + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTADFWQAFENQVQKWTQRFGYKQIRTPIVEHTNLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D+ G+  +SLR + TA   R V E+  T   P + + +G +FR E
Sbjct: 64  GEETDVVGKEMYTFNDNAGETSLSLRPEGTASCLRAVVEHDLTYAAPQKLWYMGAMFRAE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  ++ +G +    DAE+  M AD    +GI            +     
Sbjct: 124 RPQKGRYRQFHQVGIEALGFADPDIDAEIIAMCADLWRELGISGQLTLEINSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L +     DD            D   +     +++L  +            
Sbjct: 184 AHRAALVAYLSQHEAELDD------------DSKRRLHTNPLRVLDSKNPALQD------ 225

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     ++ +L     +  +    L+ G                          + 
Sbjct: 226 ---ICNAAPRLLDYLGEASLQHYNTFKSLLDGL-----------------------QIKY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +  +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ 
Sbjct: 260 IENPRLVRGLDYYNHTVFEWTT--------DKLGAQATVCGGGRYDGLMEELGGRATPSI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ ++   S   +        +  M     +      + Q LR AG+    
Sbjct: 312 GFAMGIERLLLLVRDYGSLKADFAPD----VFVMQQGEGATLAAMKHAQTLRGAGLNVAQ 367

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           F GS+K   NQ K AD+     A+I    E ++  + IKDL                   
Sbjct: 368 FSGSTK-LKNQFKRADQSGATFAVIIAENEVAQNTVTIKDLR-----------------G 409

Query: 470 RVAQITIPISELVSTVKK 487
              Q T+   ELV  + +
Sbjct: 410 ERGQTTVAADELVQQLNE 427


>gi|260786598|ref|XP_002588344.1| hypothetical protein BRAFLDRAFT_114648 [Branchiostoma floridae]
 gi|229273505|gb|EEN44355.1| hypothetical protein BRAFLDRAFT_114648 [Branchiostoma floridae]
          Length = 472

 Score =  230 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 109/480 (22%), Positives = 189/480 (39%), Gaps = 63/480 (13%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            +  K + + P+G  D   +++ IR  +  +I N ++ +G + I+TP+ E  ++L     
Sbjct: 45  ARPQKFQLKTPKGTRDYNPRQMAIREGVFKTIVNCFKRHGAETIDTPVFELKETLTGKYG 104

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           ++    K ++ L D  G+ +SLRYDLT P ARY+A N    +             N    
Sbjct: 105 EDA---KLIYDLADQGGEILSLRYDLTVPFARYLAMNKINTIKRYHIA-KVYRRDNPAMT 160

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G                                   KI+  IL +
Sbjct: 161 RGRYREFYQCDFDIAGQYDLM-----------------------IPDAECVKIVAEILSE 197

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + +                D + K   + V+            +      L  E  D + 
Sbjct: 198 LNV---------------GDFIIKTFWEDVR-----------SEMVDEKGLAPEVADRIG 231

Query: 242 SFLSIDLEKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ ++ +  +       E +       +G  E+ ++    +  G   +++    ++ RG
Sbjct: 232 EYVRLNGQLELVDQLMQDEQMMKNKMARQGLEEMKLLLTYCQLFGVL-DKVSFDLSLARG 290

Query: 299 LEYYTGCVYEAILG----FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ--NVPATGFS 352
           L+YYTG +YEAIL          +K +PV  GSV GGGRYDGLV  F  +   VP  G S
Sbjct: 291 LDYYTGVIYEAILTTEKVQSDGGDKNEPVGVGSVAGGGRYDGLVGMFDPKGKKVPCVGVS 350

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IGI RL   +++   +           +       + L +      +L   GI+ E+   
Sbjct: 351 IGIERLFSIMEAKAEAAEGKVRTTETQVYVASGQKNMLEERMKLCNLLWEGGIKTELSYK 410

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +    NQ +YA+    P   I G  E   G++++++ +  +E +            RV 
Sbjct: 411 KNPKLLNQFQYAEEHGIPFLAIIGEQELKDGVVKVRNTSTREEETFPRDKLLEEIRTRVG 470


>gi|325265764|ref|ZP_08132451.1| histidine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982747|gb|EGC18372.1| histidine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 430

 Score =  230 bits (585), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 107/492 (21%), Positives = 183/492 (37%), Gaps = 84/492 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               ++++     +G+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAYWQAFDNAVQAWTRRFGYAQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +    +SLR + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDTLSLSLRPEGTASCLRAVVEHSLLHAAPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G +    DAE+  M AD    +GI  +     +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFAEPDIDAEIIAMCADLWRELGIAEHLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L       +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRTALVAYLTQHEDKLDE--------DSKRRLHTNPLRVLDSKN---------PDLQAI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +  +L  +  +    +  L+ G                          R   + 
Sbjct: 227 CNAAPRLTDYLGEESRRHYDTVKSLLDGL-----------------------GIRYTENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+   + GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAASIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ ++       ++       +  M     S      Y   LR AG     FLGS
Sbjct: 316 GIERLLLLVRDYG----SLHADNAPDVFVMQQGEGSTLAAMQYAAALRQAGFNVAQFLGS 371

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +K   NQ K AD      A+I    E     + +KDL  GK                  Q
Sbjct: 372 TK-LKNQFKRADDSGAKFALIIAESELENRQVTLKDLRGGK-----------------GQ 413

Query: 474 ITIPISELVSTV 485
           +T+P +EL++ +
Sbjct: 414 VTVPAAELITQL 425


>gi|296327394|ref|ZP_06869943.1| histidine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296155509|gb|EFG96277.1| histidine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 413

 Score =  230 bits (585), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 98/466 (21%), Positives = 188/466 (40%), Gaps = 57/466 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   +E +    I +  + ++ENYG++ ++TP+ E ++   + + +  D
Sbjct: 1   MKLIKAVRGTKDIIGEEAKKYIYISNVAQKMFENYGYNFVKTPIFEETELFKRGIGEATD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
              K +++ +D   + I+LR + TA L R   EN         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGDRSITLRPENTASLVRCYLENAIYAKEEISRFYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG-ILEKI 182
           R R+F Q  ++  G  +   DAE+  +    LE +GI   +  I     K       EK+
Sbjct: 121 RQREFNQIGLEVFGEKSPKVDAEVIAIGYKFLEKLGITDLEVKINSVGSKASRTVYREKL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H    L++     R         +    L L + + D   DF        +    ++ 
Sbjct: 181 IEHFKSHLDDMCEDCR-------DRINRNPLRLLDCKVDGEKDFY-------KSAPSIID 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  D  K   ++ + +                            +     T+VRGL+YY
Sbjct: 227 YLFEDERKHYDDVKKYLD-----------------------VFGIKYTEDPTLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E +          K    G+V GGGRYD L+     +++PA GF+ G+ R+++ L
Sbjct: 264 SSTVFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +                +       ++        + LR   I+  +     K   + +K
Sbjct: 316 EE-------NYPKNTPDVYIAWLGENTSETALKIAESLRDNDIKVYIDYSE-KGMKSHMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            AD+      +I G  E ++G++ +KD +  ++   +I+   ++ +
Sbjct: 368 KADKLETRYCVILGEDELNKGIVLLKDFSTREQKEIKIEEIINYIK 413


>gi|226509340|ref|NP_001145708.1| hypothetical protein LOC100279212 [Zea mays]
 gi|219884113|gb|ACL52431.1| unknown [Zea mays]
          Length = 586

 Score =  230 bits (585), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 128/490 (26%), Positives = 214/490 (43%), Gaps = 59/490 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            ++P+G  D   +++ IR R    I ++++ +G   ++TP+ E  ++L GK+  D    +
Sbjct: 150 PKIPKGTRDFGKEQMAIRERAFSIITSVFKMHGATALDTPVFELRETLMGKYGED----S 205

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+
Sbjct: 206 KLIYDLADQGGELCSLRYDLTVPFARYVAMNS---ISALKRYQIAKVYRRDNPSKGRYRE 262

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G           + +   L    +    Y I +N+RK+LDG+LE  G+   
Sbjct: 263 FYQCDFDIAGVYEPMEPDFEVIKVLTELL-YQLDIGTYEIKLNHRKLLDGMLEICGVPP- 320

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +   V  +IDKLDK   + VK  L +              +++E  D + + +   
Sbjct: 321 ---QKFRTVCSSIDKLDKQTFEQVKKELVDE-----------KGISNETADEIGNLVKTR 366

Query: 248 LEK-----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                    + +        +      NEL ++ + + K+   S +I    ++ RGL+YY
Sbjct: 367 GPPLEVLMELRKEGSKFMNNVGSVAALNELEILFKALDKANAIS-KITFDLSLARGLDYY 425

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YEA+               GS+  GGRYD LV  F G+ +PA G S+GI R+   +
Sbjct: 426 TGVIYEAVFKGAA--------QVGSIAAGGRYDNLVGMFSGKQIPAVGVSLGIERVFAIM 477

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E   N         +       D           L  AGI+AE  L +     N +K
Sbjct: 478 EQQEKERNEKIRPTETEVLVSILGKDLTLAA-ELVSELWNAGIKAEFKLTTR--VANHIK 534

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           YA + + P  ++ G  E  +G +++KD+                      +  +   + V
Sbjct: 535 YALQSSIPWMVLVGESELQKGTVKLKDVE------------------ANQEEEVDRKDFV 576

Query: 483 STVKKILQEN 492
             +KK L ++
Sbjct: 577 RELKKRLSKS 586


>gi|289431961|ref|YP_003461834.1| histidyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288945681|gb|ADC73378.1| histidyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 418

 Score =  230 bits (585), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 93/485 (19%), Positives = 182/485 (37%), Gaps = 72/485 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D   ++    + +      I   YG+   +TP+ E +    + + +  D  +
Sbjct: 2   YQSPRGTEDILPEDQPYWHFVRQQAARIAALYGYQRTDTPVFEDAGLFVRSVGEGTDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D  G  ++LR + TAP+ R   E+       P + Y +  +FR ++   GR+R
Sbjct: 62  KEMYTFEDRGGDKLTLRPEGTAPVCRAYLEHGMQTRTKPVKLYYLSSIFRYDRPQAGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGLH 185
           Q  Q   + +G +  + DAE+  M       +GI      +  I  R+     +  +  +
Sbjct: 122 QHHQFGFEAIGEADASLDAEIIEMAWSFYNLLGITDLSLELNSIGCRQCRPNYISALKDY 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 +        D   +     ++  L + +          A  +++       +L 
Sbjct: 182 YQQHAGKL-----CPDCNTRLDKNTLR--LLDCKRAECQAVAGNAPRSAD-------YLC 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D                     ++ L     ++    + + R+      VRGL+YY+  
Sbjct: 228 PDC-----------------LAHYSRLKECLTILDLPFHENFRL------VRGLDYYSRT 264

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E         +        ++GGGGRYDGL+ +  G+  PA GF+ GI R+I+ LK  
Sbjct: 265 VFEI--------QPMAEGAQSTIGGGGRYDGLIEQLGGEATPAMGFATGIERIILNLKRQ 316

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG-SSKNFGNQLKYA 424
               + +       +        +          LR AGI   ++   + K+   QL+ A
Sbjct: 317 GIVPSPLPSPA---VFLAYMGETAALASFALASDLRKAGIG--IYQTYAQKSIKAQLRQA 371

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           +       +I G  E  +G   ++++                      Q  IP+ +L+  
Sbjct: 372 NSLGVDWVVILGEEELKQGCAVLRNMK------------------EAGQANIPLDQLICE 413

Query: 485 VKKIL 489
           +KK +
Sbjct: 414 IKKQI 418


>gi|224367377|ref|YP_002601540.1| HisS [Desulfobacterium autotrophicum HRM2]
 gi|259511944|sp|C0QFI0|SYH_DESAH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|223690093|gb|ACN13376.1| HisS [Desulfobacterium autotrophicum HRM2]
          Length = 425

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 86/456 (18%), Positives = 176/456 (38%), Gaps = 51/456 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RGF D    E  +   I  +   ++E++GF  I  PL+E ++   + + +  D   
Sbjct: 2   IQTIRGFRDILPGETPLWQTIERAASQLFEDFGFQEIRLPLIERTELFARSIGEVTDIVE 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR-IGPVFRNEKHGPGRFR 126
           K +++  D  G+ I+LR + TA + R   ++      P +    +GP+FR E+   GR+R
Sbjct: 62  KEMYTFPDRKGENITLRPEATASVVRSYIQHKMYAADPIQKLYTMGPMFRRERPQKGRYR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + +  G ++   DA++ +++ +  + +G+     H+     +    +  +     
Sbjct: 122 QFFQINAEVFGIASPYIDAQLILLLNELFKRLGLTDLTAHLNSLGCRECRPLFHRALT-- 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +           D   +     ++ L  +           G     +     +  L  
Sbjct: 180 --EFLVSKQDRLCSDCRRRMDKNPLRTLDCK---------VPGCREAMQDAPTTLDHLCS 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D       +   +K                              +  T+VRGL+YY+   
Sbjct: 229 DCSDHFTTVKATLKA-----------------------QGVDFLVDKTLVRGLDYYSRTA 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E                  +V GGGRYD L+    G  VPA GF+IG+ RL   +  L+
Sbjct: 266 FEIQTTA--------LGAQSAVAGGGRYDALIKELGGPEVPAIGFAIGLDRLAEVMAQLK 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        +  +     ++ K  + +  L   GIR+E    + K+  + +K AD+
Sbjct: 318 GCPAPRGP----DLFIIPLGPGAMEKAYLCSSRLNLVGIRSETDY-NGKSLKSLMKRADK 372

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            N   A+I    +  +    ++++   ++++  +++
Sbjct: 373 LNAGHALILDYRQPDKNAPVLRNMKTREQVTLGLED 408


>gi|257462975|ref|ZP_05627379.1| histidyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060592|ref|ZP_07925077.1| histidyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686268|gb|EFS23103.1| histidyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 413

 Score =  229 bits (584), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 95/461 (20%), Positives = 178/461 (38%), Gaps = 65/461 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D   ++    N I D  + ++E+YG   I+TP+ E +D   + + +  D   
Sbjct: 4   IKAVRGTKDIIGEDALKYNYISDISKQVFESYGCQFIKTPIFEETDLFKRGIGEATDVVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +++ +D   + I+LR + TA + R   EN         R Y  G +FR E+   GR R
Sbjct: 64  KEMYTFKDRGNRSITLRPENTASVVRSYLENAIYAKEDVSRFYYNGSMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN----NRKILDGILEKI 182
           +F Q  V+ +G  +   DAE+  M    L+ +GI   +  I       +R      L + 
Sbjct: 124 EFNQIGVEVLGEKSPILDAEIIAMGYKLLQRLGITDLEVRINCIGSNASRTEYRKKLLEY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                ++L          D  ++     +++L  +                 E    ++ 
Sbjct: 184 FKPMKEEL--------CEDCKNRLERNPLRVLDCKIDHAKM-----------ENAPSIID 224

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L  +       + + +                                   +VRGL+YY
Sbjct: 225 SLFEEERAHYEAVKKYLT-----------------------IFGIPFVEDPGLVRGLDYY 261

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E +          K    G+V GGGRYD L+ +   +++PA GF+ G+ R+++ L
Sbjct: 262 SSTVFEIVTN--------KLGSQGTVLGGGRYDNLLKQLGDKDIPAFGFASGVERIMMLL 313

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +                +       ++L K    T +LR    +  +   S K   + +K
Sbjct: 314 EE--------YPKKSTDVYLAWLGENTLEKAMEITALLRENNTKVSVDYHS-KGMKSHMK 364

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            AD+ N    II G  E ++ ++ +K+    ++    ++N 
Sbjct: 365 KADKLNTKYCIILGEDELAKNVVILKNFETREQEEISMENI 405


>gi|326440043|ref|ZP_08214777.1| histidyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 420

 Score =  229 bits (584), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 92/476 (19%), Positives = 173/476 (36%), Gaps = 69/476 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + PRG  D    +      + ++I    +N G+  +ETP  E  +   + + +  D  
Sbjct: 3   TFQAPRGTYDLLPPDSATFLAVREAIAAPLKNSGYGYVETPGFEAVELFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF--PCRTYRIGPVFRNEKHGPGR 124
            K +++ +   G  ++LR + TA + R   E         P + +  G  +R EK   GR
Sbjct: 63  TKEMYAFETKGGTKLALRPEGTASVLRAALEANLHKQGVLPVKLWYSGSYYRYEKPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G++          D       R+ L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLRHFRILLNSLGDQECRPVYREALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  + +    +  LR +D         V+  L                     
Sbjct: 183 EFLRGLDLDEETRRRVEINPLRVLDDKRP----EVRRQLT-------------------G 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +   L         E+ EL+       +   +L                       V
Sbjct: 220 APSLRDSLCDGCRAYHQEVRELLTEAGVSFEDDEKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMLGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++   S           +  +    ++          LR AG+ A+   G  + 
Sbjct: 309 RTVLALQAEGVSLELPPATS---VFAVPLGEEARRALFGVVTRLRRAGVAADFAYG-GRG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +K A R      ++ G  + + G++Q+K++  G++    +        A +A
Sbjct: 365 LKGAMKVAHRSGARYTVVAGERDLAEGVVQLKNMESGEQRPVPLSTVVDELGALLA 420


>gi|150400469|ref|YP_001324235.1| histidyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166228578|sp|A6UT01|SYH_META3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|150013172|gb|ABR55623.1| histidyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 418

 Score =  229 bits (584), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 117/455 (25%), Positives = 198/455 (43%), Gaps = 41/455 (9%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
              P+G  D    E++ R  I + +++++  Y F+ I TP  EY + L K   ++ R  K
Sbjct: 2   FNRPKGTRDFAPSEMKKRKIIENKLKSVFMAYNFNEINTPTFEYFELLSKKTGEDIR--K 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F  +D   + + LR ++T+ + R+       +  P + +     FR E+   GR+R+F
Sbjct: 60  QLFVFKDHGNREMGLRPEITSSVVRFYINELKNLPKPQKLFYFANCFRYEQPQAGRYREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +GS    ADAE+  +  D L  + +   DY I I +  +L G+ E+ GL  D+
Sbjct: 120 WQMGCELLGSKNPIADAEVINLAMDGLNKINM---DYEIHIGHLGVLKGVFEEFGLTEDE 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L     + R IDK D   L+   + L E +     D       +   ++ ++  L    
Sbjct: 177 EL----KIRRLIDKEDYENLEKCLIELEENKNIIIKDIIFSVLNSKGTVEEVIGNL---- 228

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                   E++K      +  N L  I E V++     N   I+  I RGL+YYTG V+E
Sbjct: 229 -------KEILKNYPKSIEALNNLEEIMEFVKR-----NNYIINLGIARGLDYYTGMVFE 276

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                       K      V GGGRYD L+  F+G   PA GF+ G  R+++ +   E  
Sbjct: 277 VY---------GKKEGARQVCGGGRYDNLIELFEGAPTPAVGFAYGFDRIMLNIDDFEV- 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                E   +LI  +  D   L +  +    LR      E+ L  ++     L YA+   
Sbjct: 327 -----EDKRILIVPIKKDKKLLKECLIIADKLREMEKIVEVDL-MNRKLNKALNYANTVG 380

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               I+ G  E +   + IKD+  G++   +++  
Sbjct: 381 ISKVIMIGEKELNERKISIKDMETGEQKLIDLEEL 415


>gi|165976603|ref|YP_001652196.1| histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|165876704|gb|ABY69752.1| histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 413

 Score =  229 bits (584), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 100/480 (20%), Positives = 187/480 (38%), Gaps = 72/480 (15%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             DC   E  +   I + +RN+   YG+  +  P++E +    + + +  D  +K +++ 
Sbjct: 1   MNDCSPTESPLWQWIENKVRNVLAGYGYSEVRMPIVESTPLFARAIGEVTDVVSKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D + + ++LR + TA   R   E         R + +GP+FR+E+   GR+RQF Q  V
Sbjct: 61  WD-NDEQLTLRPEGTAGCVRAAIERGWIYNNEQRLWYMGPMFRHERPQKGRYRQFHQAGV 119

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           +  G      DAE+ ++ A   + +GI   D H+ +    I              K  E 
Sbjct: 120 EVFGIPNPEIDAELIILTARLWKELGI---DQHVSLQLNSIGSLEARANYRSALVKFLEN 176

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L + ++ ++     +++L  + +                    ++ +L     +   
Sbjct: 177 HTALMSDEEKERLVKNPLRILDTKNQA---------LQEVLNDAPKLLDYLDDGSREHFA 227

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
            L  L+                              +++  +VRGL+YY   V+E +   
Sbjct: 228 HLCHLLDA-----------------------MGITYEVNPKLVRGLDYYNKTVFEWVTSA 264

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                       G+V GGGRYDGLV +  G      GF++G+ RL++ ++ +    N  K
Sbjct: 265 --------LGSQGTVCGGGRYDGLVEQLGGHATQGIGFAMGLERLVLLVQEVNKEINLPK 316

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLGSSKNFGNQLKYADRRNC 429
               V +  +     +        + +R+     G+   M   S  NF  Q K AD+   
Sbjct: 317 A---VDVYVVYSGEGATLNAFQMAERIRSELPQLGV---MTHCSGGNFKKQFKRADKVEA 370

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
            +A++ G  E  +  + +KDL  G E                 Q+TI  ++L++ + K  
Sbjct: 371 QIALVIGESEVEQQTVVLKDLQSGAE-----------------QVTIAQADLIAELTKRF 413


>gi|301612910|ref|XP_002935955.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like [Xenopus
           (Silurana) tropicalis]
          Length = 497

 Score =  229 bits (584), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 120/440 (27%), Positives = 207/440 (47%), Gaps = 32/440 (7%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           +     + P+G  D   K++ IR R+L ++ N ++ +G + I+TP+ E  ++L     ++
Sbjct: 53  QKHFVLKTPKGTHDVHPKQMAIRERVLSTVVNCFKRHGAETIDTPVFELKETLTGKYGED 112

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P AR++A N  T +        G V+R +K   G
Sbjct: 113 ---SKLIYDLKDQGGELLSLRYDLTVPFARFLAMNKITNMKRYHI---GKVYRRDKPARG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G          C+ +   +    ++  ++ I +N+R++L GIL   G
Sbjct: 167 RYREFYQCDFDIAGHHDPMIPDAECLKILHEILT-ELELGNFRIKVNDRRLLIGILTVCG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   V  +IDKLDK     V+  L E              L +E ++ +  +
Sbjct: 226 VPE----AKFRTVCTSIDKLDKIPWDSVRRELIE-----------DKELEAETVEQIGKY 270

Query: 244 LSIDLEKSMHELYE---LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + ++    + E       +       +G  +L ++++     G  +++I     + RGL+
Sbjct: 271 IRLNGGLPLLEHLWDDPKLSQNNLAMEGLRDLKLLNKYSEIFGV-TDKIVYDLGLARGLD 329

Query: 301 YYTGCVYEAILGFPVMN----EKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIG 354
           YYTG +YEA+L          +      +GSV GGGRYDGLV  F  ++   P  G SIG
Sbjct: 330 YYTGVIYEAVLLQNPGGPHVRQNGHSEEYGSVAGGGRYDGLVGMFDPKDRAVPCVGLSIG 389

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R+ + L+    ++    +     +  +      L +       L  +GIRAEMF   +
Sbjct: 390 IERMFMLLEKKYKNSKEKIQTTDTQVLVVSAQKKFLEEKMKLIAALWNSGIRAEMFYKEN 449

Query: 415 KNFGNQLKYADRRNCPLAII 434
             F +QL Y + R  PL +I
Sbjct: 450 PKFLSQLHYCEERGIPLVVI 469


>gi|224146257|ref|XP_002325939.1| predicted protein [Populus trichocarpa]
 gi|222862814|gb|EEF00321.1| predicted protein [Populus trichocarpa]
          Length = 533

 Score =  229 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 125/489 (25%), Positives = 215/489 (43%), Gaps = 59/489 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            +LP+G  D   +++ IR R    I ++++ +G   ++TP  E  ++L GK+  D    +
Sbjct: 96  PKLPKGTRDFANEQMVIRERAFSIIADVFKRHGATSLDTPAFELRETLMGKYGED----S 151

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+
Sbjct: 152 KLIYDLADQGGELCSLRYDLTVPFARYVAMNG---ITSFKRYQIAKVYRRDNPSKGRYRE 208

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G   E       + +   L    +   DY + +N+RK+LDG+LE  G+  +
Sbjct: 209 FYQCDFDIAGQYEEMGPDFEIVKVLTELLD-ELDIGDYEVKLNHRKLLDGMLEICGVPPE 267

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI- 246
               +   +  +IDKLDK   + VK  + E              L  E  D + +F+   
Sbjct: 268 ----KFGTICSSIDKLDKQSFEQVKKEMVEE-----------KGLAVETADRIGTFVKEK 312

Query: 247 DLEKSMHELYELVKG----TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           D  K +    +          +  +  +EL ++ + + +S    +++    ++ RGL+YY
Sbjct: 313 DSPKELLSKLKQEGSEFLQNASSSRALDELEILFDALERSKC-IDKVVFDLSLARGLDYY 371

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG ++EA+               GS+  GGRYD L+  F  + VPA G S+GI R+   +
Sbjct: 372 TGVIFEAVFKGTT--------QVGSIAAGGRYDNLIGMFGSKPVPAVGVSLGIERVFAIM 423

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           + L+   N         +      + S +      T  L +A ++AE  + +   F   +
Sbjct: 424 EQLQKDRNETTRPTETQVLLGIMGNKSKIPLAAELTSKLWSAKLKAEFVVSTR--FDKII 481

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             A+    P  ++    E   G ++I++L                      +  +P+S  
Sbjct: 482 SRANDSKIPWMVLVRDRELETGKVKIRNLETK------------------IEEEVPLSAF 523

Query: 482 VSTVKKILQ 490
           V  VK  L 
Sbjct: 524 VDEVKNRLN 532


>gi|258542226|ref|YP_003187659.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633304|dbj|BAH99279.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636363|dbj|BAI02332.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639416|dbj|BAI05378.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642472|dbj|BAI08427.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645527|dbj|BAI11475.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648580|dbj|BAI14521.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651633|dbj|BAI17567.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654624|dbj|BAI20551.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 427

 Score =  229 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 109/470 (23%), Positives = 193/470 (41%), Gaps = 64/470 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D   ++ R    ++ + R I   YGFD   TP+ E +    + L D  D  +
Sbjct: 15  IQPVRGTHDLIGEDQRRHAHVVHTARRIAGVYGFDEWATPIFEDTRVFSRSLGDTSDVVS 74

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++S  D DG+ ++LR + TA + R +  N  T   P + +  GP+FR+E+   GR+RQ
Sbjct: 75  KEMYSFSDRDGESLTLRPEGTAAICRALVTNALTQSLPQKVFYAGPMFRHERPQKGRYRQ 134

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKI 182
           F Q   + +G++   ADAE   M  + L+A+GI        +      +R      L   
Sbjct: 135 FHQIGAELLGAAEPLADAEAIAMGYEVLKALGIADYVTLELNTLGDAASRDAWRDALVAY 194

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                DKL+E        D L +     +++L  +   D          +      +M  
Sbjct: 195 FSAHKDKLSE--------DSLTRLEKNPLRILDSKDAGDK---------VLVADAPMMAE 237

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+                       +++L    ++            ++ +IVRGL+YY
Sbjct: 238 FLT-----------------PEARAFWDDLRNKLDVF------GIAYTVNPSIVRGLDYY 274

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E +          +    G+V  GGRYDGLV +  G  VPA G++ GI RL + L
Sbjct: 275 NHTTFEFVTN--------RLGSQGTVLAGGRYDGLVKQMGGPEVPAIGWAAGIERLSMLL 326

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + + ++  +        +  +   +   S      Q LR  G+R E+      +   +++
Sbjct: 327 EQVPAAPRS--------VVLVPVGTPDESAVVQILQGLRGQGVRTEIGYKG--SLRKRME 376

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A ++N    +  G  E ++G+ ++K++  G E         S  +   A
Sbjct: 377 RAGKQNASHVLFLGEDELAKGLFRVKNMETGTEQEVSRDTLLSKAQDVFA 426


>gi|328881157|emb|CCA54396.1| Histidyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 420

 Score =  229 bits (583), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 92/476 (19%), Positives = 176/476 (36%), Gaps = 69/476 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D           + D+I       G+  +ETP  E  +   + + +  D  
Sbjct: 3   TFKAPKGTYDLIPPFSAQYLAVRDAIAAPLRTSGYGYVETPGFEDVNLFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
           +K +++ +   G  ++LR + TA + R   E             +  G  +R E+   GR
Sbjct: 63  SKEMYAFETKGGDKLALRPEGTASVLRAALEASLHKQGNLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G++          D       R+ L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLRNFRILLNSLGDKECRPVYREALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G L  + L  D +    +  LR +D       + V+  L                     
Sbjct: 183 GFLRGLDLDDDTRRRIEINPLRVLDDK----REAVQKQLV-------------------G 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+  L+       +   +L                       V
Sbjct: 220 APLLRDYLCDACKAYHEEVRALITSAGVVFEDDAKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++       +       +  +    ++          LR AG+  +   G +K 
Sbjct: 309 RTVLALEAEGI---ELDIPAATSVFAVPLGDEARRVLFGVVTELRKAGVATDFSFG-AKG 364

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +K A+R     AI+ G  + + G++Q+KD+  G++ +  +         R+A
Sbjct: 365 LKGHMKNANRSGARYAIVAGERDLAEGVVQLKDMESGEQQAVALDGLVEAVRTRLA 420


>gi|28199156|ref|NP_779470.1| histidyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182681887|ref|YP_001830047.1| histidyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130095|sp|Q87C26|SYH_XYLFT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229470709|sp|B2I5Y4|SYH_XYLF2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|28057254|gb|AAO29119.1| histidyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182631997|gb|ACB92773.1| histidyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578141|gb|ADN62110.1| histidyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 466

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 145/509 (28%), Positives = 229/509 (44%), Gaps = 68/509 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGVLELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
               V+      G               ++LR+DLT PLARYVAE    + FP R Y+I 
Sbjct: 62  ---QVY-FVQSTGTLANAAESGATRLPELALRFDLTVPLARYVAEYEHVLAFPFRRYQIQ 117

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GRFR+F QCD+D +G    +   +  ++         +   D+ + +NNR
Sbjct: 118 RVYRGERAQRGRFREFYQCDIDVIGKQTLSIRYDAEVLAVIHAVFSELGIGDFQVQLNNR 177

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+L G LE  G+   +    +L VLR +DKLDK G+  V+  L            +G  +
Sbjct: 178 KVLRGFLESQGVRDGE---LQLAVLREVDKLDKRGVLDVRDTL----------IGQGFGI 224

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYEL--------VKGTIAGEKGFNELVVISELVRKSGY 284
            + Q++ +++F++         L  L         +      +G  EL  +  LV   G 
Sbjct: 225 PAAQVENILTFVATRSTSHADALARLDALIQDSGPEAHDMLRQGVAELREVLTLVNVLGV 284

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
             +  +++ +I RGL+YYTG VYE  L              GS+  GGRY+ L + +   
Sbjct: 285 PEHAYRLNFSIARGLDYYTGTVYETALI--------NHPQIGSICSGGRYENLANHYTQS 336

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +P  G SIG++RL   L+         +     ++  M  D  +L       + LR  G
Sbjct: 337 KLPGVGISIGLTRLFWQLRDAGLIDGIAESSVQAMVVLM--DEATLDDALDIARRLRIGG 394

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I  E+ +  +K    Q +YA R      ++ G  ER+RG++ +KDL   ++         
Sbjct: 395 INTEVQM-EAKKLSKQFQYASRAGIRFVVLAGDDERARGVVAVKDL-TREQ--------- 443

Query: 465 SWREARVAQITIPISELVSTVKKILQENK 493
                   Q  IP  EL ST++  L++ K
Sbjct: 444 --------QFEIPREELASTLQVELEQAK 464


>gi|118399178|ref|XP_001031915.1| histidyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89286250|gb|EAR84252.1| histidyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 928

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 114/484 (23%), Positives = 202/484 (41%), Gaps = 37/484 (7%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           + + + ++P+G  D    ++ I+ ++   I+ I   +G   I+TP+ E  ++L     ++
Sbjct: 465 EERRKPKIPKGTRDFNPLQMAIKRKVFKIIQGILLQHGAVEIDTPVFELKETLTGKYGND 524

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L D  G+ +SLRYDLT P AR++A    T                     G
Sbjct: 525 ---SKLIYDLDDQGGELLSLRYDLTVPFARFLATQSLTNFKRFHIA-KVYRRDQPNMTKG 580

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD+D  G+          + + + +       + + I +N+RKILD ++E  G
Sbjct: 581 RYREFYQCDIDIAGNYDPMIPDAEIIKVVNDILQALELGSPFTIKVNSRKILDAMIEIAG 640

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   +   +  +IDKLDK     V+  L E              L    +D +  F
Sbjct: 641 APHS----KFKTICSSIDKLDKEPWSEVRRELIE-----------DKGLDVVIVDKLGHF 685

Query: 244 LSIDLE--KSMHELY--ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +S   +  + + ++   +L   + AG +G  E+ ++ + +      SN +    ++ RGL
Sbjct: 686 VSYKGKPFELLQKIKDDKLFDASEAGRQGVQEMTLLFDYLEAMNCLSN-VSFDLSLARGL 744

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG +YEA+L              GS+GGGGRYDGLV  F  + +P+ G S+GI R+ 
Sbjct: 745 DYYTGMIYEAVLEGA---------NIGSIGGGGRYDGLVGMFSSKQIPSVGGSVGIERVF 795

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L+       +I              +    +       +   G++ E+          
Sbjct: 796 NILEEQYKKKLSI-RATETEFLVCTVGNGLCKEKLRLVNEMWARGLKTEIIYSEKPKPRK 854

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           QL YA     P  I  G  E   G +++K      E            E ++ Q      
Sbjct: 855 QLDYAYENQIPFTIWLGEEEIKGGFVKVKCTYTKVEEPCPRDKLFETLEQKLVQYH---D 911

Query: 480 ELVS 483
           +L++
Sbjct: 912 DLIN 915


>gi|34762826|ref|ZP_00143812.1| Histidyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|294784988|ref|ZP_06750276.1| histidine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|27887528|gb|EAA24612.1| Histidyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|294486702|gb|EFG34064.1| histidine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 413

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 97/466 (20%), Positives = 186/466 (39%), Gaps = 57/466 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   +E +    I +  + ++ENY ++ ++TP+ E ++   + + +  D
Sbjct: 1   MKLIKAVRGTKDIIGEEAKKYIYISNVAQKMFENYNYNFVKTPIFEETELFKRGIGEATD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
              K +++ +D   + I+LR + TA L R   EN         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGDRSITLRPENTASLVRCYLENAIYAKEDISRFYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG-ILEKI 182
           R R+F Q  ++  G  +   DAE+  +    LE +GI   +  I             EK+
Sbjct: 121 RQREFNQIGIEVFGEKSPKVDAEVIAIGYKFLEKLGITDLEVKINSVGSNASRTVYREKL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H    L++        D  D+     ++LL  +   D             +    ++ 
Sbjct: 181 VEHFKSHLDDM-----CDDCKDRINRNPLRLLDCKVDKDKDFY---------KSAPNIID 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  D  K   ++ + +                            +     T+VRGL+YY
Sbjct: 227 FLFEDERKHYEDVKKYLD-----------------------VFGIKYTEDPTLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E +          K    G+V GGGRYD L+     +++PA GF+ G+ R+++ L
Sbjct: 264 SSTVFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                            +       ++        + LR   I+  +     K   + +K
Sbjct: 316 GE-------NYPKNNPDVYIAWLGENTSETALKIAESLRDNDIKVYIDYSE-KGMKSHMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            AD+ +    II G  E ++G++ +KD +  ++   +I+   ++ +
Sbjct: 368 KADKLSVRYCIILGEDELNKGIVLLKDFSTREQKEVKIEEILNYIK 413


>gi|258593719|emb|CBE70060.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS) [NC10
           bacterium 'Dutch sediment']
          Length = 419

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 99/463 (21%), Positives = 178/463 (38%), Gaps = 56/463 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ +  RG  D   +E     R   + R++ + YG+  I TP  E ++   + + +  D 
Sbjct: 1   MKLKGVRGAPDLLPQESARWQRAEATTRSLLQRYGYAEIRTPAFERTELFVRGIGEGTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K +++  D     ++LR + TAP+ R   E+      P  + Y +GP+FR E+   GR
Sbjct: 61  VEKEMYTFTDQGDVSLTLRPEGTAPVVRAYLEHQIAAQCPLVKVYYLGPMFRRERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q  V+ +GS   T DAE+  ++   +                             
Sbjct: 121 YRQFHQIGVEAIGSDQPTVDAEVIDLLWALMVQ--------------------------- 153

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
               +     + LR     D      ++  L     D S +         ++  + +   
Sbjct: 154 ----EFRIPDLQLRLNSIGDAACRPTIRDRLSRYMADRSSELCPDCQGRLKRNPLRIMDC 209

Query: 245 SIDLEKSM--HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
             +  + +       L     A    F E+  + +L++          I   +VRGLEYY
Sbjct: 210 KQEGCQRLVAEAPKPLESLCEACAAHFAEVRGLLDLLK------IPYTIDERLVRGLEYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E I          +     ++ GGGRYDGL+    G + PA GF++G+ R++ +L
Sbjct: 264 TKTAFEMI--------NPRLGAQNALAGGGRYDGLIESMGGPSTPAMGFAVGLERVMASL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                     +E     +        +        Q LR  GIR  M L  +++   Q++
Sbjct: 316 ------PETSEESALHGVYVATIGQAAQRTGMGLLQELRRRGIRGLMDL-EARSLKGQMR 368

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A++      +I G  E  RG   ++D+ K  + S  +     
Sbjct: 369 QANKERVRYCLIMGDEELGRGQTTLRDMVKADQTSVALDRIVE 411


>gi|310778224|ref|YP_003966557.1| histidyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747547|gb|ADO82209.1| histidyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 413

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 101/464 (21%), Positives = 189/464 (40%), Gaps = 64/464 (13%)

Query: 7   LRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   ++    N I+++ + ++E YG+  I+ P+ E ++   + + +  D
Sbjct: 1   MKLLKAVRGTKDIFGEDALKYNHIVNTAKEVFEAYGYSMIKIPIFEETNLFKRGIGEGTD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
              K +++  D   + I+LR + TA + R   E+         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFTDRGDRSITLRPEGTASVVRSYLEHKIYGKEEFTRYYYTGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGIL 179
           R R+F Q  ++ +G  +   DAE+  M    LE +GI       +   G  +R      L
Sbjct: 121 RQREFNQLGIEALGEGSPILDAEVIAMSYTLLEKLGITDLEVNINSVGGNESRSKYRDTL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                   D+L          D   ++    +++L  +                +E+   
Sbjct: 181 INFLTPSKDEL--------CEDCRARYERNPLRVLDCKNPKCKE---------ITEEAPS 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++  L+ +  +    + + +                            + + +S +VRGL
Sbjct: 224 IIDSLNQEEREHYESVKKYLD-----------------------IFGIKYRENSRLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY+  VYE I          K    G+V GGGRYD L+ +   + +PA GF+ GI RL+
Sbjct: 261 DYYSSTVYEVITN--------KLGSQGTVLGGGRYDNLLKQLGNKEIPAVGFAAGIERLM 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L+         K    V I  +  D  +        + LR AGI+  +   SS++   
Sbjct: 313 MLLED------YPKNNPEVFIAWLGKDEAT--YAFGIAKALRDAGIKTCIEF-SSRSLKA 363

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +K AD+     AII G  E +   + +K+  +  + +  I++ 
Sbjct: 364 SMKKADKLGVGHAIIIGDEEMANKKMVLKNFQERTQETLSIEDV 407


>gi|320354861|ref|YP_004196200.1| histidyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123363|gb|ADW18909.1| histidyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 424

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 86/469 (18%), Positives = 169/469 (36%), Gaps = 54/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ +   GF D           I    R+I+E +G   I TP++E ++   + + +  D 
Sbjct: 1   MKIQAINGFKDILPDTAVRWRHIEQRARDIFERFGMREIRTPIMEKTELFVRSIGEATDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR-IGPVFRNEKHGPGR 124
             K +++  D     I++R + TA + R   E+   +  P +    IGP+FR+E+   GR
Sbjct: 61  VEKEMYTFIDKG---ITMRPEATASIMRAFIEHGLHVQQPIQRLYAIGPMFRHERPQKGR 117

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q D + +G+     DAE+  M    L+ +G+  +     +          +++  
Sbjct: 118 LRQFHQLDAEIIGAVEPRVDAELIAMGQMLLDELGLSVSLELNSLGCPICRPPFKQRLVA 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +             D   +     +++L  +  T              +    ++  L
Sbjct: 178 FLEQTSEGL-----CEDCKRRTQTNPLRVLDCKKPT---------CRALVKDAPSLLDAL 223

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D ++   E+   ++G                            +++  +VRGL+YYT 
Sbjct: 224 CPDCDRHFQEVQGALQGLE-----------------------IPFRLNPFMVRGLDYYTR 260

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +                      RYDGL+    G  +   GF++G+ R+ + L+ 
Sbjct: 261 TTFEFLTTDLGAQAAVGAGG--------RYDGLIEELGGPPLSGIGFAMGLERIALLLEQ 312

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                   +      I        +L+        LR  GIR  +   S +     LK A
Sbjct: 313 R---PEGEQPTDTTDIFIAALGQATLAPCSQLAHGLRKQGIRVGIDY-SGRGLKALLKQA 368

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            R N    +I G  E +     ++++   ++    +         R+A+
Sbjct: 369 ARINARFTLIVGDDEWASQQGILRNMTTQEQQPVALVGTTDELSRRLAE 417


>gi|297182947|gb|ADI19095.1| histidyl-tRNA synthetase [uncultured alpha proteobacterium
           HF0070_34A12]
          Length = 420

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 106/467 (22%), Positives = 178/467 (38%), Gaps = 54/467 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           R +  RG  D     +    R++ + R     YGF  + TP+ E+++   + L D  D  
Sbjct: 3   RLQPARGTTDLMPAAMAGHQRVIGTARAAAGLYGFQEMATPMFEFAEVFSRPLGDSSDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K  ++  D  G+ ++LR + TA + R +  N  T   P + +  GP+FR E+   GR R
Sbjct: 63  TKETYNFTDRGGETLTLRPENTAGVVRAMISNGLTQSLPLKFFYAGPMFRYERPQKGRMR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  ++ +G     ADAE+    A  L+ +G+  +   + +N+    +   +      
Sbjct: 123 QFHQIGIEYLGLCDGLADAEIIGCGARILDDLGV-LDRCTLHLNSLGDSES-RQAYRAAL 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            D LN     L   D   +     +++L  +   D +            +   + +FL+ 
Sbjct: 181 VDFLNAHEADLS-EDSRTRLTSNPLRILDSKDAGDRA---------IIAEAPSLDAFLND 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              +    +   + G                                 +VRGL+YY    
Sbjct: 231 GSRRHFDNVTGALDGA-----------------------GISWSFDPLLVRGLDYYCHTA 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I               G+V GGGRYDGL     G  VP  G++ G+           
Sbjct: 268 FEFIT--------DALGAQGTVLGGGRYDGLSEMLGGPPVPGVGWAAGV--------ERL 311

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +      E     +  M  D D+        + LR AGI     L +    G +LK ADR
Sbjct: 312 AMLVGDVEPAAPRVAVMPMDGDAEGAAFALAESLRGAGIAV--DLPAGGAIGKRLKKADR 369

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +A+I G+ E + G  QI+DL  G++         S     +++
Sbjct: 370 AGVRIAVILGSDEVAGGSAQIRDLGAGRQREVPQAELASVLHGMLSE 416


>gi|89901084|ref|YP_523555.1| histidyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89345821|gb|ABD70024.1| histidyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 437

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 91/473 (19%), Positives = 182/473 (38%), Gaps = 55/473 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +G  D    +      +   +R +   Y +  I TP++E +    + L    D  
Sbjct: 12  KLTAIKGMNDVLPPDSAAVEWLEAKVRALMACYAYRNIRTPIVERTPLFIRGLGQVTDIV 71

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S +D  +G  ++LR + TA + R V E+        R Y IGP+FR+E+   GR+
Sbjct: 72  EKEMYSFEDSLNGDLLTLRPEATAGVVRAVVEHSMLYDGGKRLYYIGPMFRHERPQRGRY 131

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +G S    DAE+ ++     + +G+      +    +        +  + 
Sbjct: 132 RQFDQIGAEALGFSGAEVDAELILLAVALWKDLGLTDVRLELNSLGQPQERLAHRQALID 191

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             ++  + L      D   +     +++L  +     +           E     + +L 
Sbjct: 192 HFERYADVLD----EDAKRRLYSNPLRILDTKNPAMQT---------VVESAPRPLDYLG 238

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                  + L  ++                               ++  +VRG++YY   
Sbjct: 239 EASLAHFNTLKTILDANGVA-----------------------YIVNPRLVRGMDYYNLT 275

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            +    G+V  GGRYD L+ +  G+  PA G+++G+ R++  ++  
Sbjct: 276 VFEFTT--------DRLGSQGTVCAGGRYDYLIEQLGGKPAPAVGWALGVDRVLELIREQ 327

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS---KNFGNQLK 422
              +         ++     D ++L       Q LRTAG+  +M   S     +  +Q K
Sbjct: 328 GLDSVVPPLDAYAIV----PDVEALPLVLQTLQTLRTAGVSVQMHTSSGDGMGSMKSQFK 383

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLA--KGKELSREIKNNESWREARVAQ 473
            AD      A++ G  E ++ ++ +K L    G ++S+ + +   W     +Q
Sbjct: 384 RADGSGARFALVFGADEIAKNLVIVKSLRDGSGAQVSQSLTDVLGWSSTLQSQ 436


>gi|332701712|ref|ZP_08421800.1| Histidyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332551861|gb|EGJ48905.1| Histidyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 438

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 95/456 (20%), Positives = 174/456 (38%), Gaps = 54/456 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF-LPDEDRP 66
             +  +GFAD  + E    + +  + R ++  YG   + TP+LE ++   +    + D  
Sbjct: 28  TIQSIKGFADLFSPESDNFSFLEATAREVFGRYGVSELRTPILEKTELFARGIGGETDVV 87

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRF 125
            K +++ +D  G+ ++LR + TA + R   E+         + + IGP+FR E+   GR 
Sbjct: 88  QKEMYTFEDKGGRSVTLRPEATAGVVRAFIESGQHAPERVSKYFTIGPMFRYERPQKGRL 147

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q + +  G+ A   DAE+ +M+A  L++VG+    + +                  
Sbjct: 148 RQFHQINCEVFGTDAPHCDAEVMLMLATFLKSVGLSGLSFEVNSLGCPECR---PTFHQR 204

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D  +         D L +     +++L  +                  +   +   L 
Sbjct: 205 LTDYFSGLDKGKLCADCLRRTATNPLRVLDCKVAACKD---------VVAEAPRIDDNLC 255

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              +     +  ++                                +  +VRGL+YY   
Sbjct: 256 PSCKTHFDTVLSILDAAGLA-----------------------YTRNPFLVRGLDYYQRT 292

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E                  +V GGGRYDGLV    G  VP  GF+IG+ RL + L   
Sbjct: 293 TFEVTST--------NIGAQTAVAGGGRYDGLVELLGGPKVPGVGFAIGMERLALLLAGR 344

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           E                   D  +L +  +  Q LR  G+  E+   ++K+  +QL+ A+
Sbjct: 345 E--------PARKDFYLAVLDEKALDQGLLLAQKLRERGLSGEVSF-AAKSPKSQLRLAN 395

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +      ++ G  E + G + +K L  G++ S   +
Sbjct: 396 KLGVKTCLLLGGEELAAGTIVVKSLDTGEQTSMPQE 431


>gi|298674180|ref|YP_003725930.1| histidyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287168|gb|ADI73134.1| histidyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 408

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 104/461 (22%), Positives = 182/461 (39%), Gaps = 61/461 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++   PRG  D    E   R  + ++IR++   +G+  + TP  E  +       D+   
Sbjct: 1   MKLSKPRGTRDFLPGETARRRYVENTIRDVVIKWGYSEVMTPTFETLELFTLKSGDDIIG 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +++  D  G+ I+LR +LTAP+ R       +   P + +     FR E+   GRFR
Sbjct: 61  --ELYNFTDKGGREIALRPELTAPVMRMYVNKLQSEPHPLKLFYFENCFRYERPQKGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q   + +GS    ADAE+  +  + L++VG+   +  + + + +I+  IL  +    
Sbjct: 119 EFWQFGTEVIGSDKPEADAEVIALAVNILDSVGV---NGALHVGDLRIIRHILSGLDNEQ 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K+      +R +DK D  GL      +                + +E    +   +S+
Sbjct: 176 QTKV------MRYVDKNDDKGLDDYLEEIE---------------VPAETRRNLFELISL 214

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
               ++ +  E+            EL    EL++          I   I RGL+YYTG V
Sbjct: 215 QGNDALEKAREITGDIP-------ELDNFEELLKLLDVYGLDYTIDFGIARGLDYYTGMV 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E           +       V GGG Y  L+  F G  VP+TGF IG  R    ++   
Sbjct: 268 FEIY--------AEGLGAQNQVCGGGSY-QLIKLFGGGEVPSTGFGIGFDR---IMEVAS 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG----SSKNFGNQLK 422
                 K+        +     +  +       LR      E++        +NF +QL 
Sbjct: 316 IEPEETKK------LVVVSTDSTRFEAIDIANRLR------EVYPTHVDIMERNFKSQLS 363

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +A+      A+I G  E   G L +K++  G++ S  +   
Sbjct: 364 FANMVEADYAVIVGEREIESGKLTLKNMHTGEQCSMTVDEI 404


>gi|19703643|ref|NP_603205.1| histidyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|32130122|sp|Q8RGJ5|SYH_FUSNN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|19713757|gb|AAL94504.1| Histidyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 413

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 98/466 (21%), Positives = 188/466 (40%), Gaps = 57/466 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   +E +    I +  + ++ENYG++ ++TP+ E ++   + + +  D
Sbjct: 1   MKLIKAVRGTKDIIGEEAKKYIYISNVAQKMFENYGYNFVKTPIFEETELFKRGIGEATD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
              K +++ +D   + I+LR + TA L R   EN         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGDRSITLRPENTASLVRCYLENAIYAKEEISRFYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG-ILEKI 182
           R R+F Q  ++  G  +   DAE+  +    LE +GI   +  I     K       EK+
Sbjct: 121 RQREFNQIGLEVFGEKSPKVDAEVIAIGYKFLEKLGITDLEVKINSVGSKASRTVYREKL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H    L++     R         +    L L + + D   DF        +    ++ 
Sbjct: 181 IEHFKSHLDDMCEDCR-------DRINRNPLRLLDCKVDGEKDFY-------KSAPSIID 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  D  K   ++ + +                            +     T+VRGL+YY
Sbjct: 227 YLFEDERKHYDDVKKYLD-----------------------IFGIKYTEDPTLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E +          K    G+V GGGRYD L+     +++PA GF+ G+ R+++ L
Sbjct: 264 SSTVFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKDIPAVGFATGVERIMMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +                +       ++        + LR   I+  +     K   + +K
Sbjct: 316 EE-------NYPKNTPDVYIAWLGENTSETALKIAESLRDNDIKVYIDYSE-KGMKSHMK 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            AD+      +I G  E ++G++ +KD +  ++   +I+   ++ +
Sbjct: 368 KADKLETRYCVILGEDEFNKGIVLLKDFSTREQKEIKIEEIINYIK 413


>gi|331697361|ref|YP_004333600.1| Histidyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952050|gb|AEA25747.1| Histidyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 438

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 95/470 (20%), Positives = 174/470 (37%), Gaps = 70/470 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  +    +  +R  + D++    +  G+  IE P+ E +    + + +  D  +K +
Sbjct: 27  PKGIPEYLPADGFVR--VRDALVAAADRAGYGHIELPVFEDTGLYARGVGESTDVVSKEM 84

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQFI 129
           +S  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+RQ  
Sbjct: 85  YSFADRGERSVTLRPEGTAGVVRAVIEHGLDRGGLPVKLRYAGPFFRYERPQAGRYRQLQ 144

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEK 181
           Q  V+ +G      DAE+  +  +   ++G            D       R+ L   L  
Sbjct: 145 QVGVEAIGVDDPALDAEVIAVADEGFRSLGLTGYRLELTSLGDADCRPPYRERLQEFLAG 204

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + L    +    +  LR +D         V+ LL +                     ++V
Sbjct: 205 LPLDEATRHRAAINPLRVLDDKRP----EVRALLAD-------------------APLLV 241

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             LS         +   +                                +  +VRGL+Y
Sbjct: 242 DHLSEASAAHHAAVKRHLDDLGVA-----------------------YVENPRMVRGLDY 278

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E +                 +GGGGRYDGL+    GQ +   GF IG+ R ++A
Sbjct: 279 YTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMEVLGGQPLSGVGFGIGVDRTLLA 330

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
            ++   + ++      V +  +     +  +  +    LR AG+R ++  G  +     +
Sbjct: 331 CRAEGVAIDDAPR---VDVFCVPLGDAARDRLVVVAAKLRAAGVRVDIAYG-GRGLKGSM 386

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           K ADR     A++ G  +   G + +KDL  G + +  +         R+
Sbjct: 387 KAADRSGARFALVLGERDIEAGTVGVKDLGSGDQDAVALDAVVETVAGRI 436


>gi|328474881|gb|EGF45681.1| histidyl-tRNA synthetase [Listeria monocytogenes 220]
          Length = 396

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 99/441 (22%), Positives = 177/441 (40%), Gaps = 51/441 (11%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYV 95
            ENY ++ I TP+ E+++   + + D  D  +K +++ QD  G+ ++LR + TA + R  
Sbjct: 2   CENYQYEEIRTPVFEHTELFERGVGDSTDIVSKEMYTFQDKGGRSLTLRPEGTASVVRAF 61

Query: 96  AENFD--TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
            E+     +  P + Y   P+FR E+   GR RQF Q  ++ +GS   + D E+  +  +
Sbjct: 62  VEHKLYGEVSQPIKMYYNEPMFRYERPQGGRQRQFTQMGIEALGSDDPSIDVEVISLAME 121

Query: 154 TLEAVGIKRNDYHIGINNRKILD-GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
               +G+      I     K       E +  H +  ++E        +   +     ++
Sbjct: 122 FFRKIGLINIKLVINSLGDKESRLKHREALVAHFEPHIDEF-----CAECQVRLHKNPLR 176

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           +L  +   D         N   +    ++ FL+ +       + + +             
Sbjct: 177 ILDCKKDHD---------NPLIQSAPSILDFLNEESVAYFENVKKYLNALE--------- 218

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
                            +I ST+VRGL+YY    +E +        K       ++ GGG
Sbjct: 219 --------------IPFEIDSTMVRGLDYYNHTTFEIMSVEEGFGAK------TTLCGGG 258

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           RY GLV  F G + P  GF IG+ R+++AL+  +     I    P+ +  +    ++  K
Sbjct: 259 RYHGLVREFGGPDTPGMGFGIGVERILLALEKADI---KIPAKKPLEVYVITAQPEAELK 315

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  LR  GI AE      + F  QLK A+R+N    II G  E   G  Q+K++  
Sbjct: 316 AVTLVNKLRQNGISAEKDY-LKRKFKAQLKDANRKNAVYTIILGEEELQTGNYQLKNMET 374

Query: 453 GKELSREIKNNESWREARVAQ 473
           G++ +               +
Sbjct: 375 GEQEAVSETTILEKLINTKGE 395


>gi|256826889|ref|YP_003150848.1| histidyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583032|gb|ACU94166.1| histidyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 440

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 102/478 (21%), Positives = 183/478 (38%), Gaps = 65/478 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + P+G  D    +       +D+   ++  YG+ PIE P  E +D   + L    D 
Sbjct: 1   MAIQRPKGTEDLLAGKAIFYRHFVDTAFEVFGRYGYVPIEVPTFEQTDLFVRGLGTATDV 60

Query: 66  PNKGVFSLQDDDGQWI---------------SLRYDLTAPLARYVAENFDTIVF--PCRT 108
            +K +F+     G+ +               SLR + TA + R VA+N        P + 
Sbjct: 61  VSKEMFTAI--SGENLKSLLAGETVKPESRFSLRPEGTAGVVRAVAQNNLVAQGSAPVKL 118

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
              GP+FR E+   GR R+F Q  ++ +G+SA + DAE  +M+    E +GI        
Sbjct: 119 MYAGPMFRAERPQKGRLREFHQVGIECLGASAPSVDAEGIIMLMRFYERIGI-------- 170

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
              R+ +  +L  +G H         +    +D   +   + V+                
Sbjct: 171 --PRENMRLLLNSMGDHTCRPAYREAVRTYIMDHASEMCDECVRRADINPLRSFDCK-NP 227

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
                     I+  +L  D +   +++   +                             
Sbjct: 228 DCQRVMANAPIISDWLCDDCKSHYNQVKAYLDAA-----------------------GIE 264

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
                ++VRGL+YYT  V+E  +               ++GGGGRYDGL+    G++ P 
Sbjct: 265 YVEDPSLVRGLDYYTRTVFEIQVV-------DGMGSQSAIGGGGRYDGLMEEIGGKSCPG 317

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            GF++G  R ++AL +   S  N       +      D  + S+  +  Q  R AG+  E
Sbjct: 318 FGFALGFERCVLALTAAGVSVANNPTCTLFIACV---DDAARSQGFILAQTCRDAGVAVE 374

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +   S ++  +Q K AD+       + G  E + G+ +++D+A  +E          +
Sbjct: 375 IDHQS-RSLKSQFKLADKLGAVYVAVLGPDEVAAGVAKVRDMASHEEQPVSFAEVAHF 431


>gi|227543636|ref|ZP_03973685.1| histidyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300908692|ref|ZP_07126155.1| histidine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186380|gb|EEI66451.1| histidyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300894099|gb|EFK87457.1| histidine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 425

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 94/464 (20%), Positives = 175/464 (37%), Gaps = 51/464 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD       I  ++  + R ++  +G+  I TP+ E      + + D  D 
Sbjct: 1   MDYQKPKGTADILPGTTSIWEKVEQNAREVFNQFGYRGIRTPMFEDYHVFSRNVGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VEKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEK 181
           GR R+F Q  V+ + + +   D E+  M     +  G+      I    ++K+ +   E 
Sbjct: 121 GRQREFHQIGVEALNNESPQIDVEVISMAMALFKKFGVPNVKLVINTLGDKKVREDYREA 180

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +  +     +E      + D  ++     +++L  +   D              +   ++
Sbjct: 181 LINYLKPHYDEL-----SKDSQERLYKNPLRVLDSKDEGDKK---------IVAEAPSIL 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  + +    E+  L+       +    +                       VRGL+Y
Sbjct: 227 DYLDEESQAYFDEVQALLNKLGIDFEIDTNM-----------------------VRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   ++E +   PV         + +V  GGRY+GL+S+  G      GF +G+ RL++ 
Sbjct: 264 YNHTIFEIMSDSPVFG-----GGYTTVCAGGRYNGLISQLGGPEEGGIGFGMGVERLMLL 318

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+              + +     D             +R  GI A+    S    G Q+
Sbjct: 319 LQEEN---PAFAPQDQLDVFFASADQQGDEMAFEVLSKIRQQGIVADKDY-SGVKVGKQI 374

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           K A RRN     + G  E   G  Q+K+ A     + +I +  +
Sbjct: 375 KEAFRRNAKYFAVFGAREVEEGTFQLKNAATKDATTIKISDFVA 418


>gi|307298529|ref|ZP_07578332.1| histidyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915694|gb|EFN46078.1| histidyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 424

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 105/459 (22%), Positives = 191/459 (41%), Gaps = 54/459 (11%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
            +     +G  D     I   + + ++IR+I   Y F  I TP+ E ++   + + +  D
Sbjct: 3   NIMITRIKGTQDITFDNIGYWHYVEEAIRSISHRYSFTEIRTPIFEATELFKRSVGESTD 62

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPG 123
              K +++ +D  G+ I+LR + TA +AR   EN    +  P + +  GP+FR EK   G
Sbjct: 63  VVQKEMYTFEDKGGRSITLRPEGTASVARAFIENSLVNLGAPIKLFYNGPMFRYEKPQAG 122

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKI 182
           R RQF Q   + +GS +  AD E+  M    L+ + + +   +   I   K  +     +
Sbjct: 123 RLRQFHQFGAEILGSESPLADFEIIEMANSFLKELKVSKTKLFINSIGCPKCREDYKTAL 182

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             +  DKL          D   +F    ++LL  +   +            +++   ++ 
Sbjct: 183 RDYYRDKLPGM-----CTDCRRRFDTNVLRLLDCKIDKE-----------LAKKAPSILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  D      EL   ++                             ++   +VRGL+YY
Sbjct: 227 YLDEDCRNHFEELQWYLEKA-----------------------DIEYEVDPLLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +   +E                   + GGGRYDGLV    G + PA GF+IG+ R+++ L
Sbjct: 264 SRTAFEI--------RSSSLGSQDQIVGGGRYDGLVEYIGGNSCPAVGFAIGLERIVMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           KS E    N+ ++  V I     + +       Y++ LR  GI   + +   +N  N++K
Sbjct: 316 KS-EKVNVNVPKIPQVAILAFGREENIRG--FDYSRRLRKMGISTYVDVME-RNMRNKMK 371

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +A R    +++I G  E  R ++ +K ++ G +   +  
Sbjct: 372 HAARIGAKISLIVGKEEIERDIVTVKIMSDGSQFQVDSD 410


>gi|319787421|ref|YP_004146896.1| histidyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465933|gb|ADV27665.1| histidyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 477

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 140/509 (27%), Positives = 225/509 (44%), Gaps = 67/509 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           +R   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 9   IRPRTPAGVMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 68

Query: 66  PNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
               V+ +Q                   ++LR+DLT PLARYVAE+   + FP R Y++ 
Sbjct: 69  ---QVYFVQSTGALANAAAEGAAGGLPEMALRFDLTVPLARYVAEHEHELSFPFRRYQMQ 125

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GRFR+F QCD+D +G    +   +  ++         +    + + +NNR
Sbjct: 126 RVYRGERAQRGRFREFYQCDIDVIGKDTLSIRYDAEVLAVIHSVFSELGIGAFRVQLNNR 185

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K++ G  E  G+       ++ +VLR +DK+DK G Q V+  L                L
Sbjct: 186 KLMRGFFEAQGVAD---PQQQALVLREVDKIDKRGPQYVRETL----------AGPDFGL 232

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVK--------GTIAGEKGFNELVVISELVRKSGY 284
            +  +D +++F+ +        L ++           +     G  EL  + ELVR  G 
Sbjct: 233 PAVAVDRILAFVEVRSTSHADALAKIDDVLAEAGDNASDVLRAGAAELREVLELVRALGV 292

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
             +   ++ +I RGL+YYTG VYE  L              GS+  GGRY+ L S +   
Sbjct: 293 PESAYCLNFSIARGLDYYTGTVYETQLVE--------HPGIGSICSGGRYEDLASHYTKS 344

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +P  G SIG++RL   L+         +     ++  M  D + L+      + LR  G
Sbjct: 345 KLPGVGISIGLTRLFWQLREAGLIEGIAESSVQAMVALM--DENQLADALDIARHLRLGG 402

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I  E+ +   +  G Q +YA R      ++ G  E  RG++ +KDL   ++         
Sbjct: 403 INTEVQM-EPRKIGKQFQYASRAGIRFVVLAGPDELERGVVAVKDLV-REQ--------- 451

Query: 465 SWREARVAQITIPISELVSTVKKILQENK 493
                   Q  +P  EL  T+K  L++ +
Sbjct: 452 --------QFDVPRGELAETLKVELEQAR 472


>gi|253582253|ref|ZP_04859476.1| histidyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251835792|gb|EES64330.1| histidyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 415

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 100/466 (21%), Positives = 184/466 (39%), Gaps = 56/466 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   +E      I    + ++ENYG+  I+TP+ E +D   + + +  D
Sbjct: 1   MKLIKAVRGTKDIYGEEAVKYTYISKIAQEVFENYGYSYIKTPIFEETDLFKRGIGEGTD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPG 123
              K +++ +D   + I+LR + TA + R   EN         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGERSITLRPENTASVVRSYLENGIYGKEDVTRYYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R R+F Q  V+ +G S+   DAE+  M    LE +GI   + HI                
Sbjct: 121 RQREFNQIGVEVLGESSPILDAEVIAMSFTLLEKLGISDLEVHINSVG------------ 168

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                       +  L         +  +   +  E+  + V  
Sbjct: 169 --------------------TTASRTQYREKLLNFLNPIKEELCEDCQMRMEKNPLRVLD 208

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
             ID  K + +    +  ++  E+       + + +   G    +    S +VRGL+YY+
Sbjct: 209 CKIDKCKELTKDAPSIIDSLT-EEERAHYEEVKKYLDIFG---IKYVEDSKLVRGLDYYS 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             VYE +          K    G+V GGGRYD L+ +   +++PA GF+ G+ R+++ ++
Sbjct: 265 STVYEIVTN--------KLGAQGTVLGGGRYDNLLKQLGDKDIPAVGFAAGVERMMMLVE 316

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +       ++       T++LR AGI+  +   +SK   + +K 
Sbjct: 317 D--------YPSNSPDVYVAWLGDNAKDFGIKITKILRDAGIKTYVDF-NSKGMKSHMKK 367

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           AD+      II G  E ++ ++ +K+  K  +     +      + 
Sbjct: 368 ADKLGVKYCIIAGEDEINKNVVILKNFLKRTQEELPFEKAMEIIKE 413


>gi|254564953|ref|XP_002489587.1| Cytoplasmic and mitochondrial histidine tRNA synthetase [Pichia
           pastoris GS115]
 gi|238029383|emb|CAY67306.1| Cytoplasmic and mitochondrial histidine tRNA synthetase [Pichia
           pastoris GS115]
          Length = 486

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 108/509 (21%), Positives = 195/509 (38%), Gaps = 71/509 (13%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  +   + P+G  D   K++ IR  I   +  +++ +G   I+TP+ E  + L     
Sbjct: 12  SKIKEFTLKTPKGTKDWADKDMVIREGIFSYLSTLFKKHGGVTIDTPVFELREILSGKYG 71

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR----TYRIGPVFRN 117
           ++   +K +++L+D  G+  SLRYDLT P AR+VA N  + +          R  P    
Sbjct: 72  ED---SKLIYNLEDQGGELTSLRYDLTVPFARFVAMNGISSIKRYHIAKVYRRDQPAMTK 128

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
            +        F      +           +C  +       G+  ND+ + +N+RKILDG
Sbjct: 129 GRMREFYQCDFDVAGAYDTMVPDAEMLEILCSGLQ------GLGINDFKVKLNHRKILDG 182

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I E  G+  +D       V  A+DKLDK   + V+  + +             N   E  
Sbjct: 183 IFEVCGVKEED----VRKVSSAVDKLDKSPWEIVRKEMVDE-----------KNQPEEVA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
           D +  ++ +           ++    +  +G  ++ ++S+ V   G +   +    ++ R
Sbjct: 228 DRIGEYVKL-----------ILLANESASQGIRDMAILSDYVEAFGISK-LLSFDLSLAR 275

Query: 298 GLEYYTGCVYEAILGF---------------PVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           GL+YYTG +YEA+                     ++    V  GS+  GGRYD LV  F 
Sbjct: 276 GLDYYTGLIYEAVTAQSAPPTTVDSKKKKSLKEDDDASDYVGVGSIVAGGRYDNLVGMFS 335

Query: 343 GQNVPATGFSIGISRLIVA-LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
                     +      +  L       +         +  M   +  L++     + L 
Sbjct: 336 ASKKSIPCVGVSFGVERIFSLVRQRLVQDQQVRASHTNVFIMAFGNGFLTERMAVAKRLW 395

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AGI  E    +  N   Q + A++  C +A+I G  E ++G +++K L  G        
Sbjct: 396 DAGIETEYLYKNKSNPRRQFEAAEKLGCSIAVILGKDEVAQGKVRVKTLNTG-------- 447

Query: 462 NNESWREARVAQITIPISELVSTVKKILQ 490
                         + +  +   VK+ L+
Sbjct: 448 -------VNDDGELVDLDNVAPYVKEKLE 469


>gi|291333416|gb|ADD93118.1| histidyl trna synthetase [uncultured archaeon MedDCM-OCT-S05-C57]
          Length = 418

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 118/463 (25%), Positives = 207/463 (44%), Gaps = 45/463 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K         +G  D   +E+R+RN + D+       +GF+  + P+LE  D   +  
Sbjct: 1   MAKG-------VKGTRDFYPEEMRLRNWLFDNFTYASLLHGFEEYDAPVLENEDLYTRKQ 53

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++    K +++ +D   + +SLR ++T  LAR V      +  P + + I   +R E+ 
Sbjct: 54  GEDIV--KQLYNFKDKGNRKVSLRPEMTPSLARMVMSRAGVLPMPIKWFSIPQCWRYERM 111

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+  Q +VD  G+S  +ADAE+  ++   LE VG+   D  I +++RK+L+ +L 
Sbjct: 112 QKGRGREHFQWNVDIWGTSEISADAELFSVITTFLEGVGLTEEDVVIRVSSRKVLEEVLG 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +G+ GD            +DK+DK   + +   L E               +SE I  +
Sbjct: 172 SLGIEGD----AFAQTCIIVDKMDKLSPEAINEQLTE------------LGHSSEVISKI 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            S L +   K ++ L +++K      +   EL  + E +   G  S+ ++   +IVRGL 
Sbjct: 216 QSTLGL---KHINSLKKVLK---PDSEALKELTTLFEAIESYGI-SDWVEFDGSIVRGLA 268

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E            +   F ++ GGGRYD L+S   G+++PATGF  G   ++ 
Sbjct: 269 YYTGSVFEV---------NDRKGKFRAICGGGRYDKLLSTLGGKDLPATGFGFGDMVIME 319

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L         +     V    +  D +  +       +LR +    ++ L  +K     
Sbjct: 320 LLNDKNLLPQLLS---GVEDVVIALDPELKNVAVKVASVLRDSDRLVDLVL-ENKKMKWA 375

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            K+A+R      I+    E  R  +++KDL  G+E    ++  
Sbjct: 376 FKHAERVGANRIILVAPAEWKRQKIKVKDLQSGEEFETTLEEI 418


>gi|258573857|ref|XP_002541110.1| histidyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237901376|gb|EEP75777.1| histidyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 624

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 120/538 (22%), Positives = 213/538 (39%), Gaps = 82/538 (15%)

Query: 1   MGKKT-KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M K       + P+G  D       +R+RI  +I ++++ +G   ++TP+ E  + L   
Sbjct: 107 MPKDKVSFNLKTPKGTKDWSGGAAILRDRIFTTITDVFKRHGGTALDTPVFELREILAGK 166

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ LQD  G+  SLRYDLT P AR++A N D  V   + Y I  V+R ++
Sbjct: 167 YGED---SKLIYDLQDQGGELCSLRYDLTVPFARWLAMNPD--VRSIKRYHIAKVYRRDQ 221

Query: 120 H----GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
                G  R       D+          DAE+  ++A+  + +G  + DY I IN+RK+L
Sbjct: 222 PAMTKGRMREFYQCDFDIAGANFDPMVPDAEILRIVAEVFDDLG-WKGDYTIKINHRKVL 280

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           DG+ E  G+  +    +   +  A+DKLDK     V+  + +              L   
Sbjct: 281 DGVFEVCGVPKE----KIRTISSAVDKLDKLPWAEVRKEMVDE-----------KGLDPA 325

Query: 236 QIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             D + +++     + + +     E +    + + G  E+ ++ + +       ++I   
Sbjct: 326 VADKIETYVVRKGGRELLDSLKSDETLFANPSAKLGLEEMGLLMDYLEAFSVL-DKISFD 384

Query: 293 STIVRGLEYYTGCVYEAI----------------------------LGFPVMNEKQKPVV 324
            ++ RGL+YYTG +YE I                            L           + 
Sbjct: 385 MSLARGLDYYTGVIYEVITEGSAPPTASSAPEAQKLQRSGKKDKAKLDADEDRSDDPTIG 444

Query: 325 FGSVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITT 382
            GSV  GGRYD LV  F  +  +P  G S G+ R+    K+ +E       +   V +  
Sbjct: 445 VGSVAAGGRYDELVGMFSNKAQIPCVGISFGVDRIFSITKARMERDKKETLKNSEVDVFV 504

Query: 383 MDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           M          L +     + L  AG++             Q   A+    P A+I G  
Sbjct: 505 MAFGGKGFTGLLKERMDICKTLWEAGVKV------KPKPQQQFTAAESSGAPFAVILGDD 558

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           E + G +++K++                       + + I  L S VK  +++ K  +
Sbjct: 559 ELAAGEVRVKEM------------GLPKGHPEKDGVLVRIEALASEVKSRIEKRKARV 604


>gi|115379768|ref|ZP_01466840.1| histidyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115363215|gb|EAU62378.1| histidyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 425

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 106/470 (22%), Positives = 180/470 (38%), Gaps = 63/470 (13%)

Query: 15  FADCPTKEI-------RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             D    E+            +  + R ++  +G+  I TP++E +    + + +  D  
Sbjct: 1   MNDLLPGELGGEMAPIETWQYVERTARELFSRFGYGEIRTPMVEDTALFVRSVGEETDIV 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++ +D   + +SLR + TAP AR   E+    +    R Y +GP+FR E+   GR+
Sbjct: 61  GKEMYTFEDKAQRSLSLRPEGTAPAARAYIEHSVANLEPVTRWYYMGPMFRYERMKTGRY 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   +  GS     D E+  M+   LEA+G+K    ++            E     
Sbjct: 121 RQFFQIGAEAYGSREAAQDVELMDMVVQLLEALGLKEISLNLNSLGD-------EACRPA 173

Query: 186 GDDKLNERLIVLR---AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
              KL E L   R     D   +     +++L  + + +      +G+         ++ 
Sbjct: 174 FQKKLVEHLTAHRDALCADCQRRLEHNPMRVL--DCKNEKCQAVARGS-------PDILQ 224

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL    +    ++   +                            R  I+  +VRGL+YY
Sbjct: 225 FLCEPCQAHFADVRRKLDAL-----------------------KVRYVINPRMVRGLDYY 261

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E I   P +             GGGRYD LV    G +VPA GF +G+ RL + L
Sbjct: 262 TRTAFEFIASHPALGTASTVG------GGGRYDKLVKSLGGPDVPAVGFGLGLDRLTLLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +      +   +     +     D  S  +       LR  G++ E       +  +Q+K
Sbjct: 316 REGGQRYSAPPD-----VFIAVADEGSQDEAFTLASRLRREGLKVEFD-TRGGSLKSQMK 369

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            AD+     A++ G  ER  G  Q+K +A G+ LS  +        A   
Sbjct: 370 RADKTRARFALVLGEAERQAGRAQLKPMAGGEPLSVALGEIAQAVRAAPQ 419


>gi|257469473|ref|ZP_05633565.1| histidyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317063717|ref|ZP_07928202.1| histidyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313689393|gb|EFS26228.1| histidyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 415

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 99/466 (21%), Positives = 183/466 (39%), Gaps = 56/466 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   +E      I    + ++ENYG+  I+TP+ E +D   + + +  D
Sbjct: 1   MKLIKAVRGTKDIYGEEAVKYTYISKMAQEVFENYGYTYIKTPIFEETDLFKRGIGEGTD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPG 123
              K +++ +D   + I+LR + TA + R   EN         R Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGERSITLRPENTASVVRSYLENGIYGKEEVTRYYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R R+F Q  V+ +G S+   DAE+  M    LE +GI   + HI                
Sbjct: 121 RQREFNQIGVEVLGESSPILDAEVIAMSYTLLEKLGISDLEVHINSVG------------ 168

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                       +  L         +  +   +  E+  + V  
Sbjct: 169 --------------------TTASRTQYREKLLNFLNPIKEELCEDCQMRMEKNPLRVLD 208

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
             ++  K + +    +  ++  E+       + + +   G    +      +VRGL+YY+
Sbjct: 209 CKVEKCKELTKEAPSIIDSLT-EEERAHYEDVKKYLDIFG---IKYVEDPKLVRGLDYYS 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             VYE +          K    G+V GGGRYD L+ +   +++PA GF+ G+ R+++ L+
Sbjct: 265 STVYEIVTN--------KLGAQGTVLGGGRYDNLLKQLGDKDIPAVGFAAGVERMMMLLE 316

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +       ++       T++LR AG++  +   +SK   + +K 
Sbjct: 317 E--------YPSNSPDVYVAWLGDEAKDFGIKITKVLRDAGVKTFVDF-NSKGMKSHMKK 367

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           AD+      II G  E ++G + +KD A   +     +      + 
Sbjct: 368 ADKLGVKYCIIAGEDEINKGTVVLKDFANRTQEELSFEKAMEIIKE 413


>gi|82703491|ref|YP_413057.1| histidyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82411556|gb|ABB75665.1| histidyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 419

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 104/463 (22%), Positives = 177/463 (38%), Gaps = 54/463 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D    +I        S+R+    YG+  I  P++E +D   + +    D   
Sbjct: 6   IQAVRGMNDILPDQIDRWEFFEQSVRDWMAAYGYRNIRMPIVEQTDLFVRSIGAVTDIVE 65

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D  +G+ ++LR + TA   R V E+      P R Y  G +FR+E+   GR+R
Sbjct: 66  KEMYTFVDHLNGESLTLRPEGTASCVRAVLEHNLLYSGPQRLYYSGAMFRHERPQKGRYR 125

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   + +G      DAE+ +M AD  + +G+      IG         +     +  
Sbjct: 126 QFHQVGAEALGYGGPDIDAELIIMGADLWKRLGVSGVRLEIGTLGSAESRSVHRTRLI-- 183

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            D L   L  L   D   +     +++L  +           G     E    ++  L  
Sbjct: 184 -DYLQRHLCKLD-EDASRRLHSNPLRILDSKN---------AGMREIIEGAPRLLDDLDE 232

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D       L ++++      +    L                       VRGL+YY   V
Sbjct: 233 DSLIHFERLQQILREQGVDFEINPRL-----------------------VRGLDYYNRTV 269

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          K    G+V  GGRYDGLV +  G+  PA GF++G+ R++       
Sbjct: 270 FEWVT--------DKLGAQGTVCAGGRYDGLVEQVGGKATPACGFALGVERVLAL----- 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              ++I    P  +  +     +        + LR  G +A +  G   +F  Q++ AD 
Sbjct: 317 -VMDSIIPQAPPDVYVVHKGDAAAGFAWKTARHLRDRGFQAILHCGEG-SFKAQMRKADA 374

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWRE 468
                AII G  E   G + IK L +  +++   +       +
Sbjct: 375 SGARFAIIIGDDEAQAGEISIKPLREAAEQVRVGLAEAADLLK 417


>gi|259502226|ref|ZP_05745128.1| histidine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169844|gb|EEW54339.1| histidine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 425

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 94/467 (20%), Positives = 173/467 (37%), Gaps = 57/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD       +  ++  + R ++  +G+  I TP+ E      + + D  D 
Sbjct: 1   MDYQKPKGTADLLPGTTGLWEKVEANAREVFRQFGYRGIRTPMFEDYRVFARNVGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VEKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V+ + + +   D E+  M        G+      I        R+     
Sbjct: 121 GRQREFHQIGVEALNNESPQIDVEVIAMAMALFRKFGVPNVKLVINTLGDKQVRQDYREA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L        + D  ++     +++L  +   D                 
Sbjct: 181 LINYLKPHYDEL--------SADSQERLYKNPLRVLDSKDAGDQK---------LVADAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +    ++  L+K      +    +                       VRG
Sbjct: 224 SILDYLDDESQAYFDQVQALLKELGIDYEIDTNM-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E +   PV         + +V  GGRY+GL+S+  G      GF +G+ RL
Sbjct: 261 LDYYNHTIFEIMSDSPVFG-----GGYTTVCAGGRYNGLISQLGGPEEGGIGFGMGVERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+       +      + +     D    +        +R  GI A+    S    G
Sbjct: 316 MLLLEQEN---PDFAPQDQLDLFLASADDQGDNLAFELLNKVRQHGIVADKDY-SGVKVG 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            Q+K A RRN     + G  E S G  Q+K+ A    +  ++ +  +
Sbjct: 372 KQIKEAFRRNAKYFAVFGDREVSAGQFQLKNAATKDAVEVKVADFAA 418


>gi|126208643|ref|YP_001053868.1| histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|126097435|gb|ABN74263.1| histidyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
          Length = 413

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 100/480 (20%), Positives = 187/480 (38%), Gaps = 72/480 (15%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             DC   E  +   I + +RN+   YG+  +  P++E +    + + +  D  +K +++ 
Sbjct: 1   MNDCSPTESPLWQWIENKVRNVLAGYGYSEVRMPIVESTPLFARAIGEVTDVVSKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D + + ++LR + TA   R   E         R + +GP+FR+E+   GR+RQF Q  V
Sbjct: 61  WD-NDEQLTLRPEGTAGCVRAAIERGWIYNNEQRLWYMGPMFRHERPQKGRYRQFHQAGV 119

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           +  G      DAE+ ++ A   + +GI   D H+ +    I              K  E 
Sbjct: 120 EVFGIPNPEIDAELIILTARLWKELGI---DQHVSLQLNSIGSLEARANYRSALVKFLEN 176

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L + ++ ++     +++L  + +                    ++ +L  D  +   
Sbjct: 177 HTALMSDEEKERLVKNPLRILDTKNQA---------LQEVLNDAPKLLDYLDDDSREHFA 227

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
            L  L+                              +++  +VRGL+YY   V+E +   
Sbjct: 228 HLCHLLDA-----------------------MGITYEVNPKLVRGLDYYNKTVFEWVTSA 264

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                       G+V GGGRYDGLV +  G      GF++G+ RL++ ++ +    N  K
Sbjct: 265 --------LGSQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLVLLVQEVNKEINLPK 316

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLGSSKNFGNQLKYADRRNC 429
               V +  +     +        + +R+     G+   M   S  NF  Q K AD+   
Sbjct: 317 A---VDVYVVYSGEGATLNAFQMAERIRSELPQLGV---MTHCSGGNFKKQFKRADKVEA 370

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
            +A++ G  E  +  + +KDL  G E                 Q+ I  ++L++ + K  
Sbjct: 371 QIALVIGESEVEQQTVVLKDLQSGAE-----------------QVIIAQADLIAELTKRF 413


>gi|326500272|dbj|BAK06225.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 888

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 125/470 (26%), Positives = 209/470 (44%), Gaps = 41/470 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            ++P+G  D   +++ IR R    I ++++ +G   ++TP+ E  ++L GK+  D    +
Sbjct: 452 PKIPKGTRDFGREQMAIRERAFSIITSVFKMHGGVALDTPVFELRETLMGKYGED----S 507

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K V+ L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+
Sbjct: 508 KLVYDLADQGGELCSLRYDLTVPFARYVAMNN---ISAIKRYQIAKVYRRDNPSKGRYRE 564

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G           + +   L    +    Y I +N+RK+LDG+LE  G+  +
Sbjct: 565 FYQCDFDIAGVYEPMEPDFEVVKVLTELLD-KLDIGVYEIKLNHRKLLDGMLEICGVPAE 623

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +   V  +IDKLDK               +   +  +   +++E  + + S +   
Sbjct: 624 ----KFRTVCSSIDKLDKLT-----------FEEVKKELVEEKGVSNETAENIGSLVKTR 668

Query: 248 LEK-----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                    + +               NEL ++ + + K     +RI    ++ RGL+YY
Sbjct: 669 GPPLEVLLELRKEGSKFMENEGSVVALNELEILFKALEK-ANALDRISFDLSLARGLDYY 727

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YEA+               GS+  GGRYD LV  F  + VPA G S+GI R+   +
Sbjct: 728 TGVIYEAVFKGVT--------QVGSIAAGGRYDKLVGMFSNKQVPAVGVSLGIERVFAIM 779

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E   N +       +       D +         L +AGI+AE  L +     N +K
Sbjct: 780 EQQEKEKNQVIRATETEVLVSILGKDLILAA-ELVNELWSAGIKAEFKLTTR--VQNHIK 836

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           YA +   P  ++ G  E   G +++KD+   +E     K+     + R++
Sbjct: 837 YATQTGIPWMVLVGESELRDGKVKLKDITANQEEEVPRKDFVEVLKQRLS 886


>gi|50426923|ref|XP_462062.1| DEHA2G12210p [Debaryomyces hansenii CBS767]
 gi|49657732|emb|CAG90548.1| DEHA2G12210p [Debaryomyces hansenii]
          Length = 546

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 127/521 (24%), Positives = 221/521 (42%), Gaps = 67/521 (12%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           + +   + P+G  D   K++ IR  I  ++ ++++ +G   I+TP+ E  + L     ++
Sbjct: 52  QDQFLLKTPKGTKDWADKDMVIREAIFGTLTSLFKRHGGVTIDTPVFELREILTGKYGED 111

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K +++L+D  G+  SLRYDLT P AR+VA N  + +                   G
Sbjct: 112 ---SKLIYNLEDQGGELTSLRYDLTVPFARFVACNSISSIKRYHIA-KVYRRDQPAMTKG 167

Query: 124 RFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           R R+F QCD D  G+        E+  ++ + L  +G+K  D+ + +N+RKILDGI +  
Sbjct: 168 RMREFYQCDFDVAGNFDTMVPDSEILSLLCEGLTNLGVK--DFKVKLNHRKILDGIFQAC 225

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+  +D       +  A+DKLDK   + VK            +       + E  D +  
Sbjct: 226 GVKDED----VRKISSAVDKLDKSPWEAVKK-----------EMVVEKGQSEEVADRIGD 270

Query: 243 FLSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           F+ ++        + +  +L+K   + +KG  E+ ++++ V      +  +    ++ RG
Sbjct: 271 FVKLNGSIRDVLQILQSNDLLKENESAQKGIEEMSILADYVDAFEIANFTV-FDLSLARG 329

Query: 299 LEYYTGCVYEAILGFPV------------------MNEKQKPVVFGSVGGGGRYDGLVSR 340
           L+YYTG +YEA+                       + +  + V  GS+  GGRYD LV  
Sbjct: 330 LDYYTGLIYEAVTSASAPPTNANELKEKAQKEKAEVEDASEYVGVGSIAAGGRYDNLVGM 389

Query: 341 FKG-QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-----SDSLSKYQ 394
           F   +++P  G S G+ R+   +K+  S            +  M        +  L +  
Sbjct: 390 FSNGKSIPCVGISFGVERIFSIIKARASKELERISSSQTQVFVMAFGGGEGWNGFLKERM 449

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             T  L +AGI  E    S  N   Q   A++    +AII G  E  +G L++K L    
Sbjct: 450 AVTNKLWSAGINTEYLYKSKANIRKQFDAAEKSGAQVAIILGKEEYPQGQLRMKVL---- 505

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
                                I + ELVS V+  L    ++
Sbjct: 506 ------------GHDSDQGEIIKVDELVSVVQDKLSSLNKD 534


>gi|88812662|ref|ZP_01127909.1| Histidyl-tRNA synthetase, class IIa [Nitrococcus mobilis Nb-231]
 gi|88790078|gb|EAR21198.1| Histidyl-tRNA synthetase, class IIa [Nitrococcus mobilis Nb-231]
          Length = 424

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 95/492 (19%), Positives = 181/492 (36%), Gaps = 71/492 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           MGK      +  RGF D   +   +   +  ++  I ++YG++ I  P++E +    + +
Sbjct: 1   MGK----LIQGIRGFNDILCEATPVWRFVETTVCEILDSYGYEEIRLPVVEKTALFARAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G+ ++LR + TA   R   ++        R +  G +FR E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGESLTLRPEGTAGCVRACIQHGLLHKGQPRVWYGGAMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q   +  G      DAEM +M    L ++G+              L   +
Sbjct: 117 PQKGRYRQFHQIGAEVFGVPGPDIDAEMILMTGRMLRSLGLL------------DLQLQI 164

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +G+          +V       ++   +  + L                 L +     
Sbjct: 165 NSLGIPASRAEYRERLVSYFRRHHEQLDEEAQRRLHTNPLRILDSKSLAMQPLIA-AAPS 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++  L    +  + ++  ++                               ++  +VRGL
Sbjct: 224 ILEHLDATSQAHIEQITAILD-----------------------TAGIAYTLNPRLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT  V+E           ++    G+V  GGRYDGLV +  G   PA GF+ GI RL+
Sbjct: 261 DYYTRTVFEWT--------SERLGAQGAVCAGGRYDGLVEQIGGPPTPAIGFAAGIERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-FLGSSKNFG 418
               + E           +++       ++++      + LR    R  +       +F 
Sbjct: 313 TLTAAAECVPPEPALHAYLVVV----GEEAVAPAYRLVERLRDHLPRVRLRVNSGGGSFK 368

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           +Q K ADR     A+I    E +   + +KDL                   R  Q  +  
Sbjct: 369 SQFKRADRSGARYALIFAAEELATARVSVKDLR-----------------ERTDQRRLSE 411

Query: 479 SELVSTVKKILQ 490
           +EL+  + + + 
Sbjct: 412 AELIELLAECIA 423


>gi|269126355|ref|YP_003299725.1| histidyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311313|gb|ACY97687.1| histidyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 421

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 100/474 (21%), Positives = 176/474 (37%), Gaps = 68/474 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + P+G ++    +      +  +        G+  +E  + E +    + + +  D   
Sbjct: 5   FQAPKGVSEYVPPQAEALLAVRQAFAEQARLAGYGYVELAVFEDTQLFKRGVGESTDVVT 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D  G+ I+LR + TA + R V E        P + +  GP FR E+   GR+R
Sbjct: 65  KEMYTFEDRGGRSITLRPEFTAGVLRAVLEYGLHKQGLPVKVWTTGPAFRAERPQKGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--------YHIGINNRKILDGI 178
           QF Q D++ +GS     DAE   +  +  + +G+++                 R  L   
Sbjct: 125 QFYQLDLEAIGSQDPQIDAETIAIAWNWYQGLGLRQVRLLLNSLGCRECRPAYRTRLQEF 184

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  + L    +    +  LR +D         VK  L +                     
Sbjct: 185 LRGLDLDEATRARVEINPLRVLDDKRP----EVKAQLTD-------------------AP 221

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +M   L    +    ++  L+                                   +VRG
Sbjct: 222 LMADHLCAACKAHHDKVRSLLAD-----------------------VGIAWTDEPRLVRG 258

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   YE         E         +GGGGRYDGL     G  +P  GF +G+ R 
Sbjct: 259 LDYYTRTTYEF--------EHPLLGAQSGIGGGGRYDGLSEDIGGPPLPGIGFGLGLDRT 310

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++               +  +     +  K       LR AGI A+M   + K+  
Sbjct: 311 LLALEAEGVQLPVPSRC---QVFGVPLGETAEHKVFTLVAELRRAGIAADMAP-AGKSLK 366

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + +K ADR     A+I G  + + G  Q+KDLA G++++  + +  +    R+ 
Sbjct: 367 SAMKSADRSGAAYAVIIGERDITAGSAQVKDLATGEQIAVPLTDLTATLLERIG 420


>gi|255087340|ref|XP_002505593.1| predicted protein [Micromonas sp. RCC299]
 gi|226520863|gb|ACO66851.1| predicted protein [Micromonas sp. RCC299]
          Length = 407

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 97/441 (21%), Positives = 195/441 (44%), Gaps = 35/441 (7%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           +R+RN +    R++  ++GF+  + P+LE  +   +   +E      +++ +D   + ++
Sbjct: 1   MRVRNWLFGHFRDVARSFGFEEFDAPVLESEELYVRKAGEE--ITTQLYNFEDKGARRVA 58

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           LR +LT   AR + +   ++  P + + +G  +R E+   GR R+  Q ++D VG     
Sbjct: 59  LRPELTPSFARLIMQQGKSLALPAKWFAVGQCWRYERMTRGRRREHYQWNMDIVGVEGVE 118

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
           A+AE+   + D    +GI   D  I +++RK+L  +L +  +  D        V   +DK
Sbjct: 119 AEAELLAAITDFFTRLGITSADVGIKVSSRKVLQAVLRRFDVPDDS----FAPVCVVVDK 174

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
           ++K   + V   L                +    ID ++  +++   +S+ +L  L+   
Sbjct: 175 IEKLPREKVVEELA------------ALGVKEAAIDGILDAMAM---RSIDQLESLLGAD 219

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                  ++L ++       GY  + +   +++VRGL YYTG V+E            + 
Sbjct: 220 A---DAVSDLKLLFSHAEAYGYR-DWLVFDASVVRGLSYYTGVVFEGF---------DRA 266

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
               ++ GGGRYD L+    G++ P  GF  G + ++  +K       ++K  G V    
Sbjct: 267 GELRAICGGGRYDKLLGALGGEDRPMVGFGFGDAVIMELVKDKGLLPESLKS-GNVDDLV 325

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
              ++            LR AG   ++ +   K      K+A+R      ++ G  E  +
Sbjct: 326 YPMNAALRPAAMGIAARLRAAGRSVDLVIEDGKKPKWAFKHAERCGASRVVLIGEKEWEQ 385

Query: 443 GMLQIKDLAKGKELSREIKNN 463
           G++++KDLA  +E   + ++ 
Sbjct: 386 GVVRVKDLATREETDVKPEDL 406


>gi|148545053|ref|YP_001272423.1| histidyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184154386|ref|YP_001842727.1| histidyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364203|ref|ZP_03848299.1| histidyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325683406|ref|ZP_08162922.1| histidine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148532087|gb|ABQ84086.1| histidyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225730|dbj|BAG26247.1| histidyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070748|gb|EEI09075.1| histidyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977756|gb|EGC14707.1| histidine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 425

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 93/464 (20%), Positives = 175/464 (37%), Gaps = 51/464 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD       I  ++  + R ++  +G+  I TP+ E      + + D  D 
Sbjct: 1   MDYQKPKGTADILPGTTSIWEKVEQNAREVFNQFGYRGIRTPMFEDYHVFSRNVGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VEKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEK 181
           GR R+F Q  V+ + + +   D E+  M     +  G+      I    ++K+ +   E 
Sbjct: 121 GRQREFHQIGVEALNNESPQIDVEVISMAMALFKKFGVPNVKLVINTLGDKKVREDYREA 180

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +  +     +E      + D  ++     +++L  +   D              +   ++
Sbjct: 181 LINYLKPHYDEL-----SKDSQERLYKNPLRVLDSKDEGDKK---------IVAEAPSIL 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  + +    E+  L+       +    +                       VRGL+Y
Sbjct: 227 DYLDEESQAYFDEVQALLNKLGIDFEIDTNM-----------------------VRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   ++E +   PV         + +V  GGRY+GL+S+  G      GF +G+ RL++ 
Sbjct: 264 YNHTIFEIMSDSPVFG-----GGYTTVCAGGRYNGLISQLGGPEEGGIGFGMGVERLMLL 318

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+              + +     D             +R  GI A+    S    G Q+
Sbjct: 319 LQEEN---PAFAPQDQLDVFFASADQQGDEMAFEVLSKIRQQGIVADKDY-SGVKVGKQI 374

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           K A RRN     + G  E   G  Q+K+ A     + ++ +  +
Sbjct: 375 KEAFRRNAKYFAVFGAREVEEGTFQLKNAATKDATTIKVSDFVA 418


>gi|329897036|ref|ZP_08271808.1| Histidyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328921476|gb|EGG28862.1| Histidyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 424

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 96/493 (19%), Positives = 176/493 (35%), Gaps = 84/493 (17%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D    +      +   +RN+ ++YG+  I  P+LE +    + + +  D
Sbjct: 1   MKTLQAIRGMPDILPVDTESWQWLEQKVRNLVQSYGYQEIRMPILESTHLFARSIGEVTD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              K +++  D +G  ++LR + TA   R   +N   I  P R +  GP+FR+E+   GR
Sbjct: 61  IVEKEMYTFADRNGDSLTLRPEGTAGCVRAAIQNNL-ISTPQRLWYQGPMFRHERPQKGR 119

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKIL 175
            RQF Q  ++  G +   ADAE+  + A     +G                     +  L
Sbjct: 120 LRQFQQIGLEAFGVATPDADAELIALSARLWRELGVADVVELQLNSIGSLEARATYKAAL 179

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
              L K     D+            D   +     +++L  +           G      
Sbjct: 180 VEYLSKHQADLDE------------DSQRRLQTNPLRILDSKN---------AGTQELLN 218

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               +  FL  +       L  L+                              K++  +
Sbjct: 219 NAPNLHDFLDDESANDFARLRTLLDS-----------------------VGVHYKVNPKL 255

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   V+E +               G++  GGRYDGLV++  G+  P  GF++G+
Sbjct: 256 VRGLDYYNKTVFEWVTTE--------LGAQGTICAGGRYDGLVAQLGGKTTPGVGFAMGL 307

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R+++ L +   +      +   +      +    +  +     L    IR         
Sbjct: 308 ERVLLLLAAQGITAPRSAPLAFGVGVGEAGEKACFTGIEALRNDLPQHDIR---LNTGGG 364

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +F  Q+K AD+    +A+I G  E     + +K L   +                  Q T
Sbjct: 365 SFKAQMKRADKSGARVALIWGDSEAENDTVTLKFLRDDE-----------------PQKT 407

Query: 476 IPISELVSTVKKI 488
           +  + L   +++I
Sbjct: 408 VASALLTQELERI 420


>gi|291279934|ref|YP_003496769.1| histidyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754636|dbj|BAI81013.1| histidyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 415

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 102/469 (21%), Positives = 185/469 (39%), Gaps = 64/469 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  +GF D    +IR  + I DS + ++  +G++ I+ P+LE ++   + + D  D   
Sbjct: 2   FKKVKGFRDIFGDDIRYWHLIEDSFKKLFPTFGYEEIKLPILEKTELFVRGIGDTTDIVE 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRFR 126
           K +F+ +D DG ++SLR + TA + R   EN        R  Y  GP+FR E+   GRFR
Sbjct: 62  KEMFTFKDRDGSYLSLRPEGTASVVRAFIENKLYEPPAIRKYYYYGPMFRRERPQKGRFR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA------VGIKRNDYHIGINNRKILDGILE 180
           QF Q  ++  GS +   DAE+  ++   L        + ++ N         K  D +++
Sbjct: 122 QFYQIGIEAFGSESPLLDAEIIFLLYKFLNDFDLKDFLRMEINSIGCPECRPKYRDKLIQ 181

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
               + +D            D   +     +++L  +          +   +  +   I+
Sbjct: 182 YFKNNYEDL---------CEDCKRRLEKNPLRILDCK---------VESCKVIVKDAPII 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L    +    +L   +                               ++  IVRGL+
Sbjct: 224 LDNLCDVCDNHFRKLKSYL-----------------------NQFGVEYNVNPYIVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY    +E +          K     +VG GGRYDGL+    G ++P  GF+IG+ RL+ 
Sbjct: 261 YYVRTAFEMVT--------DKLGASSAVGAGGRYDGLIKELGGPDIPGIGFAIGVDRLVE 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +K          +   V I  +    +        +  LR AG +  +      +  ++
Sbjct: 313 LIKMKNEL-----KKDEVDIYIITF-EEFTEVGINISNELRDAGFKVNLGYDLG-SIKSE 365

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +K A+R N    +I G  E S G   +KD+  G++          + + 
Sbjct: 366 MKKANRLNSRYVLIIGEDEISSGKFTLKDMNSGEQFKINRDEIIKFLQE 414


>gi|330836497|ref|YP_004411138.1| histidyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748400|gb|AEC01756.1| histidyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 433

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 125/449 (27%), Positives = 219/449 (48%), Gaps = 38/449 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           +  ++ +GF D    +  ++ RI+  + +++  +GF PI+TP LEY++  LGK   + D 
Sbjct: 3   IEPKILKGFRDSLPAQEIVKKRIISRLEHVFSTFGFVPIDTPALEYTEVLLGKGGGETD- 61

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +F   D+ G+ +++R+DLT P AR++A +   I  P + + I  V+R E    GRF
Sbjct: 62  --KQIFRFTDNGGRDVAMRFDLTVPFARFLAAHAHEIALPFKRFHIDKVWRGENPQKGRF 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F QCD D VG     AD E+  +M ++  A+G   +     + +R + +  L  +G+ 
Sbjct: 120 REFTQCDFDIVGVDNAWADFEILSIMNESFTAMG--IDKVTFHVAHRGLFNAFLAHLGIQ 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                   + VLR +DKL K G +  +  L                 +SE+ + ++S++S
Sbjct: 178 D-----HSVDVLRTVDKLRKIGSEATREELEVLTG------------SSEKANAVLSYIS 220

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                   E  E +     GE+  +  +     +      +++ ++  +I RGL+YYTG 
Sbjct: 221 PAAGTDFLERLENLSSLAGGEQEHSGRLREIYHLLSDAGIASKFELDPSITRGLDYYTGI 280

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           VYE  L              GSV  GGRY+ L S +  + +P  G SIG+ RL+  L  L
Sbjct: 281 VYETFL--------DDLQTIGSVCSGGRYNDLASMYSPERIPGVGSSIGLDRLMSGLAEL 332

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +S          VL+  +  D    ++    +++LR++G+  ++++ +SK  G Q KYA+
Sbjct: 333 DSPLMTDTASAHVLVMVV--DEKYRTRCIALSRLLRSSGLAVDVYV-ASKKAGQQYKYAE 389

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             + P A+I   GE       +K+LA  +
Sbjct: 390 SGHIPYAVIAEDGE----KWTVKNLATRE 414


>gi|237736638|ref|ZP_04567119.1| histidyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420500|gb|EEO35547.1| histidyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 413

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 99/469 (21%), Positives = 190/469 (40%), Gaps = 64/469 (13%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++  +  RG  D   ++      I  + + I+E+YG+  I+TP+ E +D   + + +  D
Sbjct: 1   MKLIKAARGTKDIFGEDAVKYTYISKTAQEIFESYGYTFIKTPIFEETDLFKRGIGEGTD 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGPG 123
              K +++ +D   + ++LR + TA + R   EN         + Y  G +FR E+   G
Sbjct: 61  VVEKEMYTFKDRGDRSLTLRPENTASVVRSYLENAIYGKEDVTKYYYNGSMFRYERPQAG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGIL 179
           R R+F Q  V+ +G S+   DAE+  M    LE +GI   + HI       +R     +L
Sbjct: 121 RQREFNQIGVEVLGESSPILDAEVIAMSYSLLEKLGITDLEVHINSVGTNASRTKYREML 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                   ++L          D   +     +++L  + + D   + TK A    + ++ 
Sbjct: 181 LNFLEPMKEEL--------CEDCRMRMEKNPLRVL--DCKVDKCKELTKDAPSIIDSLN- 229

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                                     E+       + + +   G    +    S +VRGL
Sbjct: 230 --------------------------EEERAHYETVKKYLDIFG---VKYVEDSRLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY+  VYE +          K    G+V GGGRYD L+ +   +++PA GF+ G+ R++
Sbjct: 261 DYYSSTVYEIVTN--------KLGAQGTVLGGGRYDNLLKQLGDKDIPAVGFAAGVERMM 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L+                +       ++        ++LR  GI+  +   +SK   +
Sbjct: 313 MLLED--------YPKNNPDVYVAWLGENTQEFGLKIAKILRDNGIKTFVDF-NSKGMKS 363

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            +K AD+      II G  E ++ ++ +KD +   +    ++      +
Sbjct: 364 HMKKADKLAVKYCIIVGEDEMNKDVVVLKDFSARTQEEMSLEKAIEIIK 412


>gi|325921669|ref|ZP_08183504.1| histidyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325547858|gb|EGD18877.1| histidyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 468

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 144/502 (28%), Positives = 227/502 (45%), Gaps = 71/502 (14%)

Query: 17  DCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKGVFSLQD 75
           +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R    V+    
Sbjct: 2   ELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER---QVY-FVQ 57

Query: 76  DDGQ------------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
             G                    ++LR+DLT PLARYVAE+   + FP R Y++  V+R 
Sbjct: 58  STGALANAAAAADEGAESGGLPELALRFDLTVPLARYVAEHEHELSFPFRRYQMQRVYRG 117

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ + +NNRK+L G
Sbjct: 118 ERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNRKLLRG 177

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             E +G+   +    +L VLR +DK+DK G   V+  L            +G  + +EQ+
Sbjct: 178 FFESLGVAEGE---LQLAVLREVDKIDKRGADYVRDTL----------VGEGFGIAAEQV 224

Query: 238 DIMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           D +++F+++        L +L      V  +    +G  EL  + ELV+  G   +   +
Sbjct: 225 DKILAFVAVRSNGHADALAQLQALDASVGASATLGEGIAELREVLELVKALGVPESAYCL 284

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           + +I RGL+YYTG VYE  L              GS+  GGRY+ L S +    +P  G 
Sbjct: 285 NFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYESLASHYTKSKLPGVGI 336

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG++RL   L+         +     ++  M  D   L       + LR  GI  E+ +
Sbjct: 337 SIGLTRLFWQLREAGLIQGIAESSVHAMVALM--DESRLGDALDIARRLRIGGINTEVQM 394

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
              K  G Q +YA R      ++ G  E +RG++ +KDL   ++                
Sbjct: 395 -EPKKIGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ---------------- 436

Query: 472 AQITIPISELVSTVKKILQENK 493
            Q  +   EL ST+   L++ K
Sbjct: 437 -QFDVARDELASTLLVELEQAK 457


>gi|227488798|ref|ZP_03919114.1| histidyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227091220|gb|EEI26532.1| histidyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 405

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 94/461 (20%), Positives = 180/461 (39%), Gaps = 68/461 (14%)

Query: 20  TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDDDG 78
               R    + ++  +  +  GF+ IE P+ E +    + + +  D   K +++ +D  G
Sbjct: 2   PPVSREFLAVRETFTHEAQRAGFEHIELPIFEDTHLFARGVGESTDVVTKEMYTFEDRGG 61

Query: 79  QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           + ++LR + TA + R V E+       P +    GP FR E+   GR+RQ  Q  V+ +G
Sbjct: 62  RSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLVYSGPFFRYERPQAGRYRQLQQVGVEAIG 121

Query: 138 SSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                 DAE+  +     ++VG            D       R+ L   L K+ L  + +
Sbjct: 122 VDDPALDAEIIALADRCYKSVGLTGYRLDLSSLGDAECRPAYREKLQAFLRKLPLDEETQ 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               +  LR +D         V+ +L +                     +++  LS    
Sbjct: 182 RRAEINPLRVLDDKRP----EVQEMLVD-------------------APLLLDHLSNSSR 218

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +    +  L+                               I+  +VRGL+YYT   +E 
Sbjct: 219 EHFEVVKGLLGDF-----------------------GVSYTINPKLVRGLDYYTKTCFEF 255

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           +         +       +GGGGRYDGL+++  GQ +   GF +G+ R ++AL++   S 
Sbjct: 256 V--------HEGLGAQSGIGGGGRYDGLMAQLGGQELSGIGFGLGVDRTLLALEAEGVSA 307

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            + +    V +  +   S++          LR AG+  +M  G  +     +K A R   
Sbjct: 308 GSPRR---VDVYGVPLGSEAKRVLAGVVNNLRAAGVSTDMSYG-DRGLKGAMKGASRSGA 363

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              ++ G  E + G + ++D+   ++ +  +   +++ E R
Sbjct: 364 RYCLVLGEQELADGNVAVRDMNNHEQETVSLSAVQAFLEER 404


>gi|256544610|ref|ZP_05471982.1| histidine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256399499|gb|EEU13104.1| histidine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 432

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 126/465 (27%), Positives = 215/465 (46%), Gaps = 36/465 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDE 63
             ++ +   G  +   ++    + I + I   + +Y F PI+TP +E +D    K   + 
Sbjct: 2   NIVKPQTIAGVMELLPEDQLAFDYIKNIIEETFLSYQFLPIDTPAIEKNDILFAKGGGET 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
               K +F   D   + +SLR+DLT PLARYV+E+F  + FP + Y+I  V+R E++  G
Sbjct: 62  ---EKQIFG-IDSSKKDMSLRFDLTVPLARYVSEHFSDLNFPFKRYQIAKVYRGERNQKG 117

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+++F QCD+D +G+++ +   +  +          +  N     INNRK+L+G  E + 
Sbjct: 118 RYKEFYQCDIDIIGNNSLSIHNDALLPKVIYEIFQKLDFNGIKFHINNRKLLNGFFESLE 177

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +   +++      LR IDK  K G +  K LL E                 E+ D ++  
Sbjct: 178 ISDKEEV------LRTIDKKAKIGEENTKELLVEICG-------------EEKADKLMEL 218

Query: 244 LSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           ++   E K +    E +      + G NEL  + + + K G + + I I  +I RGL+YY
Sbjct: 219 INNKRENKELLTYLESLNLNDNYKIGLNELKEVYDYMIKFGIDDDSIMIDLSITRGLDYY 278

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  VYE  L              GSV  GGRY+ L   F  QN+P  G SIG++RL    
Sbjct: 279 TSTVYETFLDGYE--------SIGSVCSGGRYENLAGNFSKQNLPGVGLSIGLTRLFYQF 330

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L        +    L+  MD   +           L+  G++ +++L   K F  ++ 
Sbjct: 331 QQLGLVEKYKTKFTDCLVIPMDEKLNF--YAIDIANKLKEQGLKVDIYLEDGK-FKKKIN 387

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           YAD+      +I G  E    M+ +K++  GK++S +++    + 
Sbjct: 388 YADKIGVKKVLIIGQEEYENKMVSVKNMEDGKQVSVKVEEIREYL 432


>gi|303257591|ref|ZP_07343603.1| histidine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|330999632|ref|ZP_08323341.1| histidine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|302859561|gb|EFL82640.1| histidine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|329574138|gb|EGG55714.1| histidine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 425

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 101/467 (21%), Positives = 187/467 (40%), Gaps = 57/467 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG +D   ++  + +       ++ + YG+  I TP++E +    + + +  D  
Sbjct: 5   KIQAIRGMSDMLPEDAPLWHFFEKEASSLAKLYGYQHIRTPIVEQTRLFKRGIGEVTDIV 64

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +G  +SLR + TA + R   E+      P R + +GP+FR+E+   GR+
Sbjct: 65  EKEMYSFVDSLNGDELSLRPENTASVVRACIEHNLLYEGPKRLWYMGPMFRHERPQRGRY 124

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  ++ +G      DAE  +M+    + +GI      +         G LE    +
Sbjct: 125 RQFHQFGMEAMGFKGPDTDAEQLLMLNRLWKRLGIAPVRLELNCL------GQLEDRKAY 178

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +  +         +D+     L    L + + +  +  D    A         +   L 
Sbjct: 179 REVLIQYFEAHKDILDEDASRRLYSNPLRILDTKNPDMQDLVNNA-------PKLYDSLG 231

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + ++ + +L  ++K                              ++  +VRGL+YY   
Sbjct: 232 EESKQFLADLEAILKA-----------------------EGIDYVVNPRLVRGLDYYNLT 268

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          K    G++ GGGRYD L+    G++ PA GF++GI R++  +K  
Sbjct: 269 VFEWVT--------DKLGAQGTICGGGRYDPLIGMLGGRDAPACGFAMGIERVLELMKEC 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                + +    V+      D           + LR A I   +    S  FGNQ+K AD
Sbjct: 321 GVKPESRECDVYVVW-----DKALYLNALSAAERLRDADIATIIH-SGSMKFGNQMKRAD 374

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAK-----GKELSREIKNNESWR 467
                 A++ G  E + G + +K L +     G++ +  I    S  
Sbjct: 375 ASGALYALVIGADEAAAGKVGLKALRENLEGYGEQKTLTIDEAVSLL 421


>gi|222445472|ref|ZP_03607987.1| hypothetical protein METSMIALI_01111 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435037|gb|EEE42202.1| hypothetical protein METSMIALI_01111 [Methanobrevibacter smithii
           DSM 2375]
          Length = 431

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 110/468 (23%), Positives = 199/468 (42%), Gaps = 43/468 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRG  D    E+R R +    +RN++ENY +  I+TPL E          +E   
Sbjct: 1   MEFTRPRGTRDFLFDEMRERKKAESILRNVFENYAYQEIKTPLFEELKLFTTKSGEEIVD 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRF 125
              +++ +D   + ++LR ++TAP+AR            P + Y  G  FR E+   GRF
Sbjct: 61  --QLYNFKDKSDRELTLRPEITAPVARLYLNELQKTASKPIKLYYYGSCFRYERPQKGRF 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +G+ +   +AE+  M ++++E +GI   D  + IN+  I+ G+ +   + 
Sbjct: 119 RQFWQFGCELIGAKSPQGEAEVIAMCSESIEKLGIPGAD--VNINHLGIIRGLFKHFNID 176

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI---MVS 242
              +                     V +++ +G  D   +   G N   +  ++   +  
Sbjct: 177 TATQR-------------------EVMVVIDKGDKDLLKESLTGENPIIDNEELNHVLFK 217

Query: 243 FLSIDLEKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            + +  +KS + ++ ELV          NEL  + + +           ++  + RGL+Y
Sbjct: 218 LIDMVGDKSIIKDIEELVAPYPESHDALNELEELIDTLASFKM--ENYTLNLGVARGLDY 275

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG V+E  +                V GGG Y  L+  F G+ V +TGF+ G  RL+ A
Sbjct: 276 YTGIVFEVYIPS--------LGAQKQVCGGGTYS-LIKIFGGEEVVSTGFAFGFDRLMNA 326

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++ L       +   P+ I       D   K    TQ LR+A I  ++ L + K F   +
Sbjct: 327 IEEL---ATPEELPCPIDIYVAPISDDVRLKAYEITQTLRSAEIACDVDL-NGKKFKKIM 382

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +A++       I G  +     + IK++  G +   ++ N   + + 
Sbjct: 383 NHANKIKVKQVAIIGAKDLENNQITIKNMESGNQELVDLDNVVEYIKG 430


>gi|325971158|ref|YP_004247349.1| histidyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026396|gb|ADY13155.1| Histidyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 444

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 135/460 (29%), Positives = 212/460 (46%), Gaps = 39/460 (8%)

Query: 1   MGKKTK----LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-S 55
           M  KTK    +   + +GF D        +  I+  +   + +YGF PI+TP+LEY++  
Sbjct: 1   MSDKTKARSIIEPRVLKGFRDFLPAMEIPKKAIISKLETHFSSYGFVPIDTPVLEYTEVL 60

Query: 56  LGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
           LGK   + D   K +F  +D+  + ++LR+DLT P AR++A++   +  P + + I  V+
Sbjct: 61  LGKGGGETD---KQIFHFKDNGEREVALRFDLTVPFARFLAQHQSELALPFKRFHIDKVW 117

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R E    GRFR+F QCD D VG     AD E+  MM  +   +G    DY   I +R + 
Sbjct: 118 RGENPQKGRFREFTQCDFDIVGVDNAEADFEILSMMNSSFSVIG--IEDYQFCIAHRGLF 175

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           +  L  +G+     L++   +LR +DKL K G Q V   L E  T            +SE
Sbjct: 176 NAFLSHLGV-----LDKSTEILRTVDKLRKIGKQEVASQLAEITT------------SSE 218

Query: 236 QIDIMVSFL-SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + + ++S++   D  +S       +      E+   + +       K+    +      +
Sbjct: 219 KAEQILSYIHKEDENESFLTTLNRLSVLAGNEEVHTKRMQTIYYYLKNAGIESHFVFDPS 278

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           I RGL+YYTG VYE  L             FGSV  GGRY+ L S +  +N+P  G SIG
Sbjct: 279 ITRGLDYYTGIVYETFLTD--------LPNFGSVCSGGRYNDLASLYTKENLPGVGSSIG 330

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL+ AL+ L+S          V I   D    S + Y    + LR  G+R  ++L + 
Sbjct: 331 LDRLLAALEELKSPIVASTSSADVAILNTDM--TSFAYYDTIARALRKTGLRVCVYL-AD 387

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           K    Q K+A+      AI+    E       +K+L   +
Sbjct: 388 KKLAAQYKWAENNAITYAILASKEEEEENRFTLKNLGSRE 427


>gi|258653517|ref|YP_003202673.1| histidyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258556742|gb|ACV79684.1| histidyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 424

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 98/464 (21%), Positives = 177/464 (38%), Gaps = 68/464 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  +      R    I  ++    +  G+ PIE P+ E +    + + +  D  +K +
Sbjct: 7   PKGIPEYYPPVSRTFEAIRRTLLAAADRAGYGPIELPVFEDTGLFARGVGESTDVVSKEM 66

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D  G+ ++LR + TA + R V E+       P +    GP FR E+   GR+RQ  
Sbjct: 67  YTFADRGGRSVTLRPEGTAGVMRAVIEHSLDRGPLPVKLVYAGPFFRYERPQAGRYRQLQ 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILDGILEK 181
           Q  V+ +GS     DAE+  +  +    VG+ +         D       R+ L   L+ 
Sbjct: 127 QVGVEAIGSDDPALDAEVIAIADEGFRDVGLSQFRLDLTSLGDAVCRPAYRERLIAFLDG 186

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + L    +   RL  LR +D       + +                           +M+
Sbjct: 187 LDLDEPTRERARLNPLRVLDDKRPAMQEQL-----------------------AGAPLML 223

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L     +    + +++                          S   +++  +VRGL+Y
Sbjct: 224 DHLCDACREHFDRVRQVLDAL-----------------------SVPYELNPRMVRGLDY 260

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E +                 +GGGGRYDGL++   GQ++   GF +G+ R ++A
Sbjct: 261 YTRTTFEFVHPL--------LGAQSGMGGGGRYDGLMAELGGQSLSGIGFGLGVDRTLLA 312

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
            ++   +  +        +  M  DS            LR AG R +M  G  +     +
Sbjct: 313 AQAEGLTVGHPARCEIFGV-PMGPDSSLRLA--TLAGELRRAGYRVDMAYG-GRALKTAM 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           K AD     LA++ G  E   G + ++DL  G++ +  + +   
Sbjct: 369 KMADASGAALALVLGDREIVDGTVVVRDLRSGEQNAYPMGDLVQ 412


>gi|40062768|gb|AAR37662.1| histidyl-tRNA synthetase [uncultured marine bacterium 439]
          Length = 422

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 107/494 (21%), Positives = 190/494 (38%), Gaps = 77/494 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG  D    E  +   + ++I  +  +YG+    TP++E +++  + +
Sbjct: 1   MSK----KIQAIRGMNDLLPSESNLWLALEETINQLLISYGYKYCRTPIVENTETFSRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D  G+ ++LR + TA + R + E+        + +  GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTWKDLSGESLTLRPEATAGIVRMMIEHNLPREGIQKVFYHGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKIL 175
              GR+RQF Q DV+  G+     DAE+  +     + +GI      I        R   
Sbjct: 117 PQKGRYRQFHQVDVEVFGAYDAKIDAELIDITNSLWKLIGINNASLEINSLGSSETRSSY 176

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
             +L+   +    +L+E        D L +     +++L  +     +           E
Sbjct: 177 RKLLQNYFIDNKSQLDE--------DSLRRLTTNPLRILDSKNSEMEA---------LIE 219

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               M+  L  + ++        +                               I+  +
Sbjct: 220 SAPKMIDHLDDESDEHFSVFKNYLD-----------------------CLEIPYSINPRL 256

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   V+E I               G++ GGGRYDGLV +  G   PA GF+IGI
Sbjct: 257 VRGLDYYNRTVFEWISND--------LGAQGTICGGGRYDGLVEKMGGNPTPAIGFAIGI 308

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RLI+ +K   +     K               S+   +     L    I  +M   S  
Sbjct: 309 ERLILLIKDQTNKLQKNKPHLYFTALGERAQMASMKLSRDIHSALPDITITNDM---SGG 365

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +  NQ+K A++     A+I G  E S+  L IK L                   +  Q  
Sbjct: 366 SLKNQMKKANKSKADFALILGEEELSKNQLSIKPLK-----------------GQGDQQL 408

Query: 476 IPISELVSTVKKIL 489
           I +  ++  +++IL
Sbjct: 409 IKLEGIIQRLQEIL 422


>gi|164655590|ref|XP_001728924.1| hypothetical protein MGL_3918 [Malassezia globosa CBS 7966]
 gi|159102812|gb|EDP41710.1| hypothetical protein MGL_3918 [Malassezia globosa CBS 7966]
          Length = 542

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 125/534 (23%), Positives = 213/534 (39%), Gaps = 76/534 (14%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
             K K+  + P+G  D     + +R  +  +I  ++  +G   I+TP+ E  + L     
Sbjct: 43  KNKGKITLKTPKGTRDWEPLAMALRKHVFATIERVFTTHGAVTIDTPVFELKEILAGKYG 102

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH- 120
           ++   +K ++ LQD  G+  SLRYDLT P AR+VA N        + Y I  V+R ++  
Sbjct: 103 ED---SKLIYDLQDQGGELCSLRYDLTVPFARFVAMNPTEY-GNIKRYHIAKVYRRDQPA 158

Query: 121 -GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
              GRFR+F QCD D      A   DAE   ++ +TL+A+      + + +N+RKILD I
Sbjct: 159 MTKGRFREFYQCDFDIAGSYDAMVPDAECLCVLVETLDALD--IGSFTVKVNHRKILDAI 216

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
               G+  D    +   +  A+DKLDK     VK            +  +   L     D
Sbjct: 217 FAVCGVPED----KIRTISSAVDKLDKSPWADVK-----------HEMVEEKGLEESVAD 261

Query: 239 IMVSFLSIDLEKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            + +++     + +    +   ++       +G  E+ ++ + +   G   +R+    ++
Sbjct: 262 QIGTYVQQRGGRELIAKLQGDAVLTQNERAVEGLAEMELLYQYLDVYGVT-DRLSFDLSL 320

Query: 296 VRGLEYYTGCVYEAI---------------------------LGFPVMNEKQKPVVFGSV 328
            RGL+YYTG +YEA+                           +        +  V  GS+
Sbjct: 321 ARGLDYYTGVIYEAVTALSAPPSMTAASSDNKDGSEKTKKKNVAAENGELDESTVGVGSI 380

Query: 329 GGGGRYDGLVSRF----KGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVL 379
             GGRYD LV  F    +   VP  G SIG+ R+   L     +       +      V 
Sbjct: 381 AAGGRYDHLVGMFSGSKRPDAVPCVGVSIGVERVFSILMQRIQEMQARGERSSVRQKEVE 440

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
              +      L +     +ML  AGI+AE           Q    D+   P A++   GE
Sbjct: 441 AFVLSMGDGLLLERMRVCKMLWDAGIKAEFLPKKKPKLQQQFAVVDKEQIPFAVLLAPGE 500

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            + G +++K            +              +P++EL S ++  L  + 
Sbjct: 501 WANGTVRVK------------QQIGKGEAGDDKGTEVPLTELASFIRSKLATSA 542


>gi|206601609|gb|EDZ38092.1| Histidyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 437

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 97/476 (20%), Positives = 157/476 (32%), Gaps = 57/476 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              PRG  D    +      +L     I    GF  +  P+ E +    + +    D   
Sbjct: 7   IRAPRGIRDVLPPDAARFETVLKEAEAILTLGGFQKVLLPMFESTSLFARSIGGATDIVE 66

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +++  D  G   SLR + TA L R   E+         R    GP+FR+E+   GR R
Sbjct: 67  KEMYTFLDKGGDQFSLRPEGTASLLRAAIEHRLVDPSRIIRLAYSGPMFRHERPQAGRLR 126

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILEKI 182
           QF Q   + +G  A   D ++  ++        +       +       R      L   
Sbjct: 127 QFTQIGAEVLGPLAPPDDVDLLSLLHRMATDFALPSWSLLLNSLGCPLCRPAYRASLVSF 186

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +     L E      A           +++L  +               T E+   +  
Sbjct: 187 LVAHSGSLCETCHRRTAQ--------NPLRVLDCK---------VPSCQETLERAPRITE 229

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L         E+   +                               +S  +VRGL+YY
Sbjct: 230 HLCPKSRDHFEEVKRGLDAL-----------------------DIPYVLSHRLVRGLDYY 266

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E +                +   GGRYDGL +   G +VP  GF+ GI R  + L
Sbjct: 267 TETTFEFV--------SDALGAQSTWAAGGRYDGLTAELGGPDVPGIGFAAGIER--LWL 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
              ++ T    E  PV I     D+          + LR  GI A     S     +  +
Sbjct: 317 LREKAGTLPEPERHPVRILVFSMDAQGNGAALDLVRRLRKEGIPASGHF-SGGKIKSAFR 375

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            A+R       I G  E  +  +QIK+L  G++ +  + + +S  +    + T  I
Sbjct: 376 QAERDGALFLAILGEDELRQKTVQIKNLTTGEQKAWPLNDTKSIADRIRNEGTSSI 431


>gi|313897403|ref|ZP_07830946.1| histidine--tRNA ligase [Clostridium sp. HGF2]
 gi|312957773|gb|EFR39398.1| histidine--tRNA ligase [Clostridium sp. HGF2]
          Length = 445

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 96/473 (20%), Positives = 186/473 (39%), Gaps = 50/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++PRG  D    EI   +R+ + IR     Y +  I TP+ E+++   +     D  
Sbjct: 1   MSYQVPRGTQDILPNEISKWHRLEELIRQFTYVYNYQEIRTPIFEHTNVFKRGNDSSDMV 60

Query: 67  NKGVFSLQ-DDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
           NK +++ Q ++    ++LR + TA +AR   E+        P + Y +GP  R+E+   G
Sbjct: 61  NKEMYTFQLENSSTSLTLRPEGTAGVARAFVEHKMYGYADLPMKMYYVGPQCRHERPQKG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R R F Q  V+ +G+ +   D E   +    + A+G+K     I             +  
Sbjct: 121 RMRIFNQFGVEVIGAKSPLLDVETIALGWSFISALGLKDMKVLINTLGDDASRAAYREAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                +  +  I     D   ++    +++L  +   D             +Q+  M  +
Sbjct: 181 ----KEHFKNDIDHMCTDCKRRYEQNPLRILDCKIDHDLD---------IMKQVPKMADY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ + +    ++ E +       +  ++L                       VRGL+YYT
Sbjct: 228 LNEESKAYFEQVLEGLDALGIPYEVDDKL-----------------------VRGLDYYT 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-VPATGFSIGISRLIVAL 362
             V+E +     M          +V  GGRYDGLV  F G   +   G+++G+ RL++AL
Sbjct: 265 HTVFEVVSVNKEM------GAQSTVFAGGRYDGLVEYFGGPEGMSGIGWAMGLERLLIAL 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++   S  +   +    +  +     + +        LR AG R +     +++   Q K
Sbjct: 319 EAEGISLVDEDSLD---VYVLCLSPKASTTVLQVVTQLRAAGYRTDTDY-LNRSMKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             DR +  +AI+ G  +   G   +K++   ++      +     +A   +  
Sbjct: 375 TVDRMHAKVAIMIGEQDLESGSAAVKNIETKEKTEVAFDSIVEAIDAMFGEAE 427


>gi|298368461|ref|ZP_06979779.1| histidine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282464|gb|EFI23951.1| histidine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 431

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 102/488 (20%), Positives = 184/488 (37%), Gaps = 74/488 (15%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP+LE +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYQQIRTPILEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +    +SLR + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNESLSLSLRPEGTASCLRAVVEHNLLYNGPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR+RQF Q  ++ +G      DAE+  M AD  + +GI           R  L   
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDVDAEIIAMSADLWDKLGI-----------RDYLTLE 172

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           +  +G   +   +   +V       DK      + L                        
Sbjct: 173 INSLGNREERAAHRHALVDYLGRHQDKMDEDDKRRLKTNPLR-VLDTKNPALQEVCNSAP 231

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L                   A +  +  L  + + +        R   +  +VRG
Sbjct: 232 RLIDYLG-----------------DASQAHYARLKAMLDGL------GIRYIENPRLVRG 268

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++GI RL
Sbjct: 269 LDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERL 320

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +        +++      + T+     +  +   Y ++LR AG    +    S++  
Sbjct: 321 LLLVHEYG----SLRADAAPDVYTVHQGEGADLQVMKYARLLRDAGFNV-LQHSGSQSLK 375

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            Q+K AD       +I    E S G   +KD+                 + R +Q T+  
Sbjct: 376 AQMKKADGSGARFTLIVAQDELSSGSATLKDM-----------------QGRHSQQTVAA 418

Query: 479 SELVSTVK 486
           ++L++T++
Sbjct: 419 ADLINTLQ 426


>gi|237742494|ref|ZP_04572975.1| histidyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430142|gb|EEO40354.1| histidyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 412

 Score =  227 bits (578), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 99/463 (21%), Positives = 183/463 (39%), Gaps = 57/463 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              P+G  D   ++      I +  + ++ENYG+   +TP+ E ++   + + +  D   
Sbjct: 4   IRKPKGTKDIIGEDAVKYIYISNVTQKMFENYGYKFAKTPIFEETELFKRGIGEATDVVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +++ +D   + I+LR + TA + R   EN         R Y  G +FR E+   GR R
Sbjct: 64  KEMYTFKDKGDRSITLRPENTASMVRCYLENSIYAKEDVSRFYYNGSMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG-ILEKIGLH 185
           +F Q  V+  G  +   DAE+  M  + L  +G+   +  I     K       EK+  H
Sbjct: 124 EFNQIGVEVFGEKSPILDAEVIAMGYNLLTKLGVTDLEVKINSVGSKGSRTVYREKLVEH 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               L++     R         +    L L + + D   DF        +    ++ +L 
Sbjct: 184 FKSHLDDMCEDCR-------DRINRNPLRLLDCKVDGEKDFY-------KSAPSIIDYLF 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D  K   E+ + +                            +     T+VRGL+YY+  
Sbjct: 230 EDERKHYEEVKKYLT-----------------------IFGIKYTEDPTLVRGLDYYSST 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          K    G+V GGGRYD L+     + +PA GF+ G+ R+++ +   
Sbjct: 267 VFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKEIPAVGFAAGVERIMMLIDD- 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                         +       +++       + LR   I+  +   SSK     +K AD
Sbjct: 318 -------YPRDIPDVYIAWLGDNTVETAMKIAEDLRKNDIKVYVDY-SSKGMKAHMKKAD 369

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +      II G  E ++G++ +KD +  ++   +I++  +  +
Sbjct: 370 KLETKYCIILGEDELNKGVVLLKDFSTREQKEVKIEDITNQIK 412


>gi|194467292|ref|ZP_03073279.1| histidyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454328|gb|EDX43225.1| histidyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 425

 Score =  227 bits (578), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 93/464 (20%), Positives = 175/464 (37%), Gaps = 51/464 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD       I  ++  + R ++  +G+  I TP+ E      + + D  D 
Sbjct: 1   MDYQKPKGTADILPGTTSIWEKVEQNAREVFNQFGYRGIRTPMFEDYHVFSRNVGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VEKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEK 181
           GR R+F Q  V+ + + +   D E+  M     +  G+      I    ++K+ +   E 
Sbjct: 121 GRQREFHQIGVEALNNESPQIDVEVISMAMALFKKFGVPNVKLVINTLGDKKVREDYREA 180

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +  +     +E      + D  ++     +++L  +   D              +   ++
Sbjct: 181 LINYLKPHYDEL-----SKDSQERLYKNPLRVLDSKDEGDKK---------IVAEAPSIL 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  + +    E+  L+       +    +                       VRGL+Y
Sbjct: 227 DYLDEESQAYFDEVQALLNKLGIDFEIDTNM-----------------------VRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   ++E +   PV         + +V  GGRY+GL+S+  G      GF +G+ RL++ 
Sbjct: 264 YNHTIFEIMSDSPVFG-----GGYTTVCAGGRYNGLISQLGGPEEGGIGFGMGVERLMLL 318

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+              + +     D             +R  GI A+    S    G Q+
Sbjct: 319 LQEEN---PAFAPQDQLDVFFASADQQGDEMAFEVLSKVREQGIVADKDY-SGVKVGKQI 374

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           K A RRN     + G  E   G  Q+K+ A     + ++ +  +
Sbjct: 375 KEAFRRNAKYFAVFGAREVEEGTFQLKNAATKDATTIKVSDFVA 418


>gi|254168570|ref|ZP_04875413.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289595732|ref|YP_003482428.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622404|gb|EDY34976.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533519|gb|ADD07866.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 415

 Score =  227 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 113/461 (24%), Positives = 200/461 (43%), Gaps = 49/461 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +  RGF D   + +R R  + D I ++  ++GF  ++TP +E  D       +E    K
Sbjct: 2   LQRLRGFRDMYPEYMRARRIVFDKICSVARSFGFHEVDTPSVELLDLFRIKSGEEIV--K 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             FS  D  G+ I+L  +LT  ++R +A     ++ P + +    ++R E+   GR R+F
Sbjct: 60  QTFSFVDKGGREITLIPELTPSVSRMIAARK-DLIKPVKWFSFPKMWRYEEPQSGRLREF 118

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q + D  G +  TADAE+  +  + L+++G+K   Y +  ++R +++ +L  + +   +
Sbjct: 119 YQFNADIFGVANITADAEVMALAMEILDSLGLK-GKYVMKFSDRILMEELLRSLNIEKIE 177

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD-FTKGANLTSEQIDIMVSFLSID 247
           +        R IDK DK   +     + +  ++ + D       L+ +   I+  F   +
Sbjct: 178 EAF------RIIDKKDKIPEERFYEEMLKITSEENVDSLISLLKLSGDVDTILSKFEHFE 231

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + +  L +L+K    G+    +L +                     VRGL YYTG V+
Sbjct: 232 RSEILASLKDLLKAY--GKTATLDLSI---------------------VRGLAYYTGVVF 268

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                F +V GGGRYD +V  F  Q  PA GF +G + L + ++    
Sbjct: 269 EV---------HDANGEFRAVLGGGRYDRVVELFGAQPTPAVGFGMGDAVLELLMRREGV 319

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                 E+   +            +       LR +G   ++ L S ++ G QLKYA R 
Sbjct: 320 WPEEKIEVDYFIAIIPGF----RKEAIEIAMELRRSGCVVDIDL-SRRSIGKQLKYAHRI 374

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           N    II G  E   G + +KD+  G++ + +I   +   E
Sbjct: 375 NAKYTIIVGE-EIKNGEVALKDMESGEQRNVKIGELKEVIE 414


>gi|212703760|ref|ZP_03311888.1| hypothetical protein DESPIG_01808 [Desulfovibrio piger ATCC 29098]
 gi|212672728|gb|EEB33211.1| hypothetical protein DESPIG_01808 [Desulfovibrio piger ATCC 29098]
          Length = 423

 Score =  227 bits (577), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 100/454 (22%), Positives = 182/454 (40%), Gaps = 53/454 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
            A   +GFAD    +  +  R+ ++ R I+  YGF  + TP+LEY+D   + +  + D  
Sbjct: 4   IANRIKGFADMYPPQSSLFTRMENTAREIFGRYGFVELRTPVLEYTDLFKRSIGEETDVV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +F+  D  G+ +++R + TA + R   E    +     R +  GP+FR E+   GR 
Sbjct: 64  QKEMFTFPDRKGRMMTMRPEATAGVMRAYVEDARYSRESVSRLFTTGPMFRYERPQKGRM 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q + + +GS +  ADA++ +M+   L A+G+K     +          + ++  + 
Sbjct: 124 RQFHQINCECLGSHSPYADADLIIMLTRFLTALGLKDLTLKLNSLGCAHCRPLFKQALV- 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D    +        D   +     +++L  +                +++   ++ +  
Sbjct: 183 -DYLHRQDCCDQLCEDCTRRMETNPLRVLDCKQEKCRC---------VTDEAPRLLDYNC 232

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + ++    +  L+       +  + L                       VRGL+YY   
Sbjct: 233 PECKEHFDTVLRLLDAAGVKYEIDHRL-----------------------VRGLDYYCRT 269

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +                +V GGGRYDGLV    G +VP  GF+ G+ RL + L   
Sbjct: 270 TFEVV--------SGSIGAQAAVAGGGRYDGLVKSVGGPDVPGVGFACGMERLALMLGDE 321

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           E+               +  D+ S        Q LR  G++ EM   S   F   ++ A 
Sbjct: 322 EA--------PRPDFYAVAMDAQSRDLSFGLVQRLRGLGLKGEMNF-SDAGFKGLMRQAG 372

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           + N     I G  E + G + +KD+  G++ +  
Sbjct: 373 KSNARFCCIMGPDEAAAGAVVVKDMDSGEQQTLS 406


>gi|256824814|ref|YP_003148774.1| histidyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688207|gb|ACV06009.1| histidyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 481

 Score =  227 bits (577), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 131/502 (26%), Positives = 213/502 (42%), Gaps = 61/502 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRP 66
                +G  +   ++    NR+ D IR  +E  GF P+ETP  E +D  L K   +    
Sbjct: 7   TPRPAQGTLELLPRQQIAFNRMTDVIRRHFEAGGFLPLETPAFERTDVLLTKSGGET--- 63

Query: 67  NKGVFSLQD-----------------DDGQW-----------ISLRYDLTAPLARYVAEN 98
            K V+ +Q                    G+            ++LR+DLT P+AR+VA++
Sbjct: 64  EKQVYFVQSTGGLANYRDAVLAAADGQGGESAPPDGAEALPDLALRFDLTVPMARFVAQH 123

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
              + FP R Y++  V+R E+   GR+R+F+QCDVD +GS +     +            
Sbjct: 124 EGQLTFPFRRYQMQRVYRGERPQRGRYREFLQCDVDIIGSGSLNVRHDAEPPATMHAIFR 183

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
            +    + I +NNR++L G    +G+  D +      VLR +DK+DK GL  ++  L   
Sbjct: 184 ELDFGPFTIHLNNRRLLRGFFRSLGIADDAQ----PAVLREVDKIDKRGLDWLREELTGE 239

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK---GTIAGEKGFNELVVI 275
           R            L ++ ++ +  F+          +  L          + G  EL  +
Sbjct: 240 RF----------GLPADAVEALAEFVGRRTTSHADAMEALAGLEGRDAELDAGVAELREV 289

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
            E++R  G   +   ++  I RGL+YYTG VYE  L         +    GS+  GGRY+
Sbjct: 290 LEMLRHLGVPESDYCVNFAIARGLDYYTGTVYETFL--------DEHPELGSICSGGRYE 341

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            L  ++   ++P  G SIG+SRL   L       +       V +     D   L +   
Sbjct: 342 NLAGQYTKSSLPGVGMSIGLSRLFWQLMENGLVDDEPST---VQVLIPLLDEALLPEALG 398

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
               LR+AG+  E  L  +K    Q K+ADR       + G  E  +G++ +KDLA+  +
Sbjct: 399 LAAELRSAGLAVENVLEPAK-LAKQFKHADRAGIRFVAVLGAQEVEKGVVTVKDLARSDQ 457

Query: 456 LSREIKNNESWREARVAQITIP 477
            + E           +AQ  +P
Sbjct: 458 FAVERGELARALRVELAQPELP 479


>gi|329120375|ref|ZP_08249042.1| histidine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327462330|gb|EGF08656.1| histidine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 430

 Score =  227 bits (577), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 95/469 (20%), Positives = 166/469 (35%), Gaps = 78/469 (16%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      +G+  I TP++E +    + +
Sbjct: 4   KIQAVKGMNDLLPAEQKDFKLSSAFWQAFEDTVVRWTRRFGYSQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +    +SLR + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFADSNDTLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           +   GR+RQF Q  V+ +G      DAEM  M AD    +G             +     
Sbjct: 124 RPQKGRYRQFHQVGVEALGFDGPDVDAEMIAMCADLWRELGIAGELTLEINSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L+      DD            D   +     +++L  +            
Sbjct: 184 AHRAALVAYLQTHENTLDD------------DSRRRMHTNPLRVLDSKNPALQD------ 225

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +  +L  D          L+                              
Sbjct: 226 ---ICNAAPHLSDYLGADSLAHYTGFKRLLDA-----------------------QGIAY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +  +VRGL+YY   V+E            K     +V GGGRY+GL+    G++ PA 
Sbjct: 260 TENPRLVRGLDYYNLTVFEWTT--------DKLGAQATVCGGGRYNGLIGELGGKDAPAI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ ++              ++        +  +       +LR AG    +
Sbjct: 312 GFAMGIERLLLLVREYGRLKTEAAPDIYLM-----QQEEGQAAAMRCATLLRAAGFNV-L 365

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA--KGKEL 456
               +++  NQ+K AD      A+I G  E  +G   +KD+    G++ 
Sbjct: 366 QHSGAQSLKNQMKKADASGARFAVIVGASEAEQGAATLKDMQGWNGQQT 414


>gi|225873933|ref|YP_002755392.1| histidine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225793868|gb|ACO33958.1| histidine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 427

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 94/476 (19%), Positives = 176/476 (36%), Gaps = 65/476 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
             +  RG  D    E  + N++  + R ++  Y F  I TPL E +    + +  + D  
Sbjct: 3   TLKAVRGTRDLLPPETELWNKVEATARRVFARYNFGEIRTPLFEDTSLFARGVGEETDIV 62

Query: 67  NKGVFSLQDD------DGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEK 119
           +K +++ +D         Q ++LR + TA + R   E+         + Y IGP FR E+
Sbjct: 63  SKEMYTWEDRARAQSEKPQSLTLRPENTAGVVRAYIEHKLGETGMLQKLYYIGPQFRRER 122

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADA-----EMCMMMADTLEAVGIKRND-YHIGINNRK 173
              GR+RQF Q   + +G ++  +++     E+  M+A  L  +GI+        + +  
Sbjct: 123 PQKGRYRQFWQIGAEVIGPASAGSESPLRDAEVLEMLAAFLHELGIRDAKLSINSVGSAS 182

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                +  +     DK  +       +D   +     +++L  +   D            
Sbjct: 183 DRPRYVAALREALQDKAPQM-----CVDCQRRAETNPLRVLDCKVPEDQP---------I 228

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            + +  +  +L                     E+       +   +   G      +++ 
Sbjct: 229 IDALPKIADYLD--------------------EESKAHFAAVCAALDACG---VAYEVNP 265

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YYT   +E                  ++ GGGRYDGL     G   P  GF++
Sbjct: 266 RLVRGLDYYTRTTFEF--------SHGGLGAQNALLGGGRYDGLSEAIGGPKAPGIGFAM 317

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G  RLI+ L++      +                   +        LR AG++ E+  GS
Sbjct: 318 GEDRLILTLQAQ----ASEAASTLADAYVAPLGEGMNAAALRLAHELRGAGLKIELGDGS 373

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +      +  ++      I+ G  E + GML +KD A G+++         +  A
Sbjct: 374 FR-LKKSFEMGNKL-ARKIILFGEDELASGMLTVKDFASGEQVKVARGEIAHFLGA 427


>gi|124515306|gb|EAY56816.1| Histidyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 439

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 93/476 (19%), Positives = 157/476 (32%), Gaps = 53/476 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              PRG  D    +      +L     I    GF  +  P+ E +    + +    D   
Sbjct: 7   IRAPRGIKDILPPDAARFETVLKEAEAILALGGFQKVLLPMFESTSLFARSIGGATDIVE 66

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGRFR 126
           K +++  D  G   SLR + TA L R   E+         R    GP+FR+E+   GR R
Sbjct: 67  KEMYTFLDKGGDQYSLRPEGTASLLRAAIEHRLVDPSRVIRLAYSGPMFRHERPQAGRLR 126

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLH 185
           QF Q   + +G    + D ++  ++        +      +             E +   
Sbjct: 127 QFTQIGAEVLGPLTPSDDVDLLSLLHRMAIDFALPSWSLLLNSLGCPLCRPAYRESLVSF 186

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                              +     +++L  +               T E+   +   L 
Sbjct: 187 LLAHSGSLCETCH-----RRTAQNPLRVLDCK---------VPSCQETLERAPRITEHLC 232

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                   E+   +                               +S  +VRGL+YYT  
Sbjct: 233 PKSRDHFEEVKRGLDAL-----------------------DIPYVLSHRLVRGLDYYTET 269

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +                +   GGRYDGL +   G +VP  GF+ GI R  + L   
Sbjct: 270 TFEFV--------SDALGAQSTWAAGGRYDGLTAELGGPDVPGIGFAAGIER--LWLLRE 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           ++ T    E  PV I     D+          + LR  GI A     S     +  + A+
Sbjct: 320 KAGTLPAPERHPVRILVFSMDAKGNGAALDLVRQLRKEGIPASGHF-SGGKIKSAFRQAE 378

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT--IPIS 479
           R       I G  E  +  +QIK+L  G++ +  + + ++  +    + T  IP+S
Sbjct: 379 RDGALFLAILGEDELRQETVQIKNLTTGEQKAWPLNDAKTIADRIRTEGTSSIPLS 434


>gi|218887127|ref|YP_002436448.1| histidyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758081|gb|ACL08980.1| histidyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 426

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 91/454 (20%), Positives = 175/454 (38%), Gaps = 54/454 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
           +    +GFAD  + +  +   + ++ R ++  YG+  + TPLLE ++   + +  + D  
Sbjct: 17  KVGTIKGFADMFSPDSDVFTFMENTAREVFGRYGYAELRTPLLERTELFCRSIGTETDVV 76

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRF 125
            K +++  D  G+ ++LR + TA + R   +       P  + +  GP+FR E+   GR 
Sbjct: 77  QKEMYTFPDRKGRSLTLRPEATAGVMRAFIDAGRHAQEPVSKLFTTGPMFRYERPQKGRM 136

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q + + +G     ADAE+ +M+   L  +G+      +     +    +       
Sbjct: 137 RQFHQINCECLGPQEPQADAELVLMLMTFLRELGLTDLSLQVNSLGCRECRPVYRAA--- 193

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D L+         D   +     +++L  +                + +   ++    
Sbjct: 194 LRDFLDSIDRESLCEDCRRRIDTNPLRVLDCK---------VPTCRELTAEAPRIIDHNC 244

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +       +  +                                ++  +VRGL+YY   
Sbjct: 245 PECRSHFDTVLRVFDAA-----------------------QLPYVLTPRLVRGLDYYNRT 281

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +                SV GGGRYDGLV++  G +VP  GF+ G+ RL + + +L
Sbjct: 282 TFEVV--------SGSIGAQSSVAGGGRYDGLVAQLGGPDVPGVGFACGMERLALMMPAL 333

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           E    +              D  +     +  Q LR AG   E+   +++    Q++ A 
Sbjct: 334 EKKRPD--------FYIAVLDPAAADAAMLLAQELRAAGKAGEVSF-AARGIKGQMRQAG 384

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           R      ++ G  E + G + IKD+  G++ S  
Sbjct: 385 RTGARCTLLLGGDEMANGTVVIKDMDSGEQRSVP 418


>gi|312870368|ref|ZP_07730493.1| histidine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094069|gb|EFQ52388.1| histidine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 425

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 94/467 (20%), Positives = 175/467 (37%), Gaps = 57/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  + P+G AD       +  ++  + R ++  +G+  I TP+ E      + + D  D 
Sbjct: 1   MDYQKPKGTADLLPGTTGLWEKVEANAREVFRQFGYRGIRTPMFEDYRVFARNVGDTSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P + Y +GP+FR E+   
Sbjct: 61  VEKEMYDFHDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYKVYYMGPMFRYERPQS 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V+ + + +   D E+  M     +  G+      I        R+     
Sbjct: 121 GRQREFHQIGVEALNNESPQIDVEVIAMAMALFKKFGVPNVKLVINTLGDKQVRQDYREA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        D+L        + D  ++     +++L  +   D                 
Sbjct: 181 LINYLKPHYDEL--------SADSQERLYKNPLRVLDSKDEGDQK---------LVADAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++ +L  + +    ++ +L+K      +    +                       VRG
Sbjct: 224 SILDYLDDESQSYFDQVQKLLKELGIDYEIDTNM-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   ++E +   PV         + +V  GGRY+GL+S+  G      GF +G+ RL
Sbjct: 261 LDYYNHTIFEIMSDSPVFG-----GGYTTVCAGGRYNGLISQLGGPEEGGIGFGMGVERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+       +      + +     D    +        +R  GI A+    S    G
Sbjct: 316 MLLLQQEN---PDFAPQDQLDLFLASADDQGDNLAFEVLSKVRQQGIVADKDY-SGVKVG 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            Q+K A RRN     + G  E S G  Q+K+ A    +  ++ +  +
Sbjct: 372 KQIKEAFRRNAKYFAVFGDREVSEGQFQLKNAATKDAVDVKVADFVA 418


>gi|293604542|ref|ZP_06686947.1| histidine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292817123|gb|EFF76199.1| histidine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 431

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 101/480 (21%), Positives = 189/480 (39%), Gaps = 64/480 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    RG  D          +  + +R     YG+  + TP+LE++    + + +  D  
Sbjct: 10  KVAAIRGMNDVLPGPSARWEQFEEIVRGWLRGYGYRNVRTPVLEHTRLFTRGIGEVTDIV 69

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D  +G  +++R ++TA + R   E+      P R Y IGPVFR+E+   GR+
Sbjct: 70  EKEMYTFTDALNGDSLTMRPEMTAGIVRASIEHNMLYDRPQRVYSIGPVFRHERPQRGRY 129

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q DV+ +G      DAE+ +M+A   + +G+K     +    +           + 
Sbjct: 130 RQFHQIDVEALGFVGPDVDAELIVMLARLWKLLGLKDVRLELNSLGQPAERAAHRAALIE 189

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +K  + L      D   +     +++L  +                      +  FL 
Sbjct: 190 HLEKHRDILD----EDGQRRLYTNPLRVLDTKNPAMQEMA---------NSAPRLFDFL- 235

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                              G++       + + + ++G       ++  +VRGL+YY   
Sbjct: 236 -------------------GDESRAHFEGVCQRLTEAG---IEYSLNPRLVRGLDYYNLT 273

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G+V GGGRYDGL+    G+  PA GF+IG+ RL+   +  
Sbjct: 274 VFEWVT--------DRLGSQGTVCGGGRYDGLIELLGGKPAPAVGFAIGMERLLDLWEQ- 324

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +  ++      +  +    D+        + LR AG+   +  GS+  F +Q K AD
Sbjct: 325 ---SVQLEAPAECDVYVVHQGEDAQRLAASVGETLRDAGLSVIVHAGSAG-FKSQFKRAD 380

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                +A+I G  E +     +K L    +                AQ  + +++L + +
Sbjct: 381 ASGARVAVILGADEVASQTASVKYLRADAQ-------------GDTAQQQVALADLAAVL 427


>gi|149238335|ref|XP_001525044.1| histidyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146451641|gb|EDK45897.1| histidyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 532

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 138/548 (25%), Positives = 217/548 (39%), Gaps = 99/548 (18%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M KK K      + P+G  D   K++ IR  I + +  +++ +G   I+TP+ E  + L 
Sbjct: 10  MTKKAKAQDFVLKTPKGTKDWADKDMIIREAIFNKLSTMFKKHGGVTIDTPVFELREILT 69

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
               ++   +K +++L+D  G+  SLRYDLT P AR+VA N    V   + Y I  V+R 
Sbjct: 70  GKYGED---SKLIYNLEDQGGELTSLRYDLTVPFARFVACNS---VSSIKRYHIAKVYRR 123

Query: 118 EKHGPGRFRQFIQCDVDN-VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           ++    + R       D  +  + +    +  ++       VG+   D+ + +N+RKILD
Sbjct: 124 DQPAMTKGRMREFYQCDFDIAGNYDLMVPDSEILNILCEGLVGLNITDFKVKLNHRKILD 183

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           GI E  G+   D       V  AIDKLDK     VK  + E               + E 
Sbjct: 184 GIFEACGVPEAD----IRKVSSAIDKLDKSPWDAVKKEILEK------------GQSEET 227

Query: 237 IDIMVSFLSIDLEKSMHELYELVK-----GTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            D + +F+      S+ E+ +++K        + ++G  E+ V+++ V         +  
Sbjct: 228 ADKIWTFVQHSG--SIREVIDILKKSEGLENESAQQGIKEMEVLADYVEAFDILK-HLSF 284

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKP----------------------------- 322
             ++ RGL+YYTG +YEA+       E  K                              
Sbjct: 285 DLSLARGLDYYTGLIYEAVTSASAPPENAKELKEKASEEKKKLKEKKEKKDKKSKDAKEG 344

Query: 323 -----------------VVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKS 364
                            V  GS+  GGRYD LV  F      P  G S G+ RL   +K 
Sbjct: 345 STEVAAAVEEEEDASAYVGVGSIAAGGRYDNLVGMFSHNKSIPCVGISFGVERLFSIIKQ 404

Query: 365 LESSTNNIKEMGPVLITTMDHDS---DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
               +    +   V +            L +    T  L  AGI AE       N   Q 
Sbjct: 405 RVDLSKMNSQHTDVYVMAFGGGEGWNGFLKERMQITNQLWKAGIHAEFLYKGKANIRKQF 464

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             A++    +A+I G  E   G L+IK L +G+E   E+               I I +L
Sbjct: 465 DGAEKSGAKIAVILGKEEYPEGKLRIKLLGQGEENEGEL---------------ISIEDL 509

Query: 482 VSTVKKIL 489
           + TVKK L
Sbjct: 510 IPTVKKEL 517


>gi|294085497|ref|YP_003552257.1| Histidyl-tRNA synthetase, class IIa [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665072|gb|ADE40173.1| Histidyl-tRNA synthetase, class IIa [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 422

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 103/457 (22%), Positives = 176/457 (38%), Gaps = 54/457 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
           + +  RG +D    ++     ++D  R     YGF  + TP+ E++D   K L    D  
Sbjct: 3   KLQPVRGTSDLLPADMAGHRFVVDHARAASAQYGFQEMATPIFEFTDVFSKPLGTSSDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K  +S +D  G+ I+LR + TA + R +     T   P + +  GP+FR E+   GR R
Sbjct: 63  TKETYSFEDRGGEQITLRPENTAGVVRAMISGGLTQSLPLKFFYAGPMFRYERPQKGRMR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  ++ +G +   ADAE+    A  L  +G+  +   + +N+    +  L       
Sbjct: 123 QFHQIGIEYLGPTDALADAEIIACGARVLADIGV-LDKCVLHLNSLGDTESRL-TYRAAL 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            D L      L   D   +  +  +++L  + + D                  +   L+ 
Sbjct: 181 VDYLGGHKDALS-DDSKQRLAVNPLRILDSKDKGDREIIV---------AAPRLQDHLND 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +     L   +                              +    +VRGL+YY    
Sbjct: 231 LSKAHFETLTTALDAAKIA-----------------------WQFDPLLVRGLDYYCHTA 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I               G+V GGGRYDGL     G  +   G++ GI R  +A+ +  
Sbjct: 268 FEFIT--------DALGAQGTVLGGGRYDGLSEMLGGPAIAGVGWAGGIER--LAMLAAG 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                   +    +  +  DS+S        + LR AG      L ++ N G ++K  D+
Sbjct: 318 G------TVVVPQLAVVSADSESDHHAFQLAESLRDAGFSV--DLPTAGNMGKKMKKLDK 369

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               +AII G  E  RG++Q+++LA G +        
Sbjct: 370 AGIKIAIILGGDEVERGVVQLRNLADGSQDEVTRDAL 406


>gi|118602669|ref|YP_903884.1| histidyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166228607|sp|A1AWV6|SYH_RUTMC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|118567608|gb|ABL02413.1| histidyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 422

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 99/493 (20%), Positives = 186/493 (37%), Gaps = 79/493 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG +D   K+      +  +I +++ +YG+  I TP++E +D+  + +
Sbjct: 1   MSK----KIQAIRGMSDLLPKDSAFWLSLERTIFDLFISYGYQNIRTPIVEKTDTFCRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
               D   K ++S  +  G+ +SL  + TA   R + E+        + +  G +FR E+
Sbjct: 57  GGATDIVEKEMYSWIESGGESLSLNPEGTAGCVRMMIEHNLPREGIQKVFYQGAMFRRER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKIL 175
              GR+RQF Q  ++  G++    DAE+ M+     + +G+K      +       R   
Sbjct: 117 PQKGRYRQFHQVGLEVFGATNAKVDAELMMITHTLWQVLGLKNIVLEINTLGSSETRVAY 176

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
             IL        D+L+E          L +     +++L  + +   S            
Sbjct: 177 RKILIAYFNQYKDQLDENS--------LKRLKTNPLRILDSKNKAMRSLI---------N 219

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++ +L  +  +   +    +                          +    I++ +
Sbjct: 220 NAPKLMDYLDKESAQHFEQFKTYLDAL-----------------------NVTYIINTCL 256

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   V+E                 G++  GGRYDGLV +  G   PA G +IG+
Sbjct: 257 VRGLDYYNRTVFEWTTT--------NLGAQGTICAGGRYDGLVEKMGGIPTPAVGLAIGL 308

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS- 414
            RLI+ L+              + I  +     +  K       L  A     ++   + 
Sbjct: 309 ERLILLLEVQNLMAIE----PTLSIYLVALGEKAQIKSMQIASTLHDALPNVILYNDLTL 364

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +F +QLK A++     A+I G  E +   + IK L                   +  Q 
Sbjct: 365 GSFKSQLKKANKIKAYFALILGEQELNNNQVSIKPLK-----------------GQGTQQ 407

Query: 475 TIPISELVSTVKK 487
           T+ + E +  +K+
Sbjct: 408 TMDLEEAIKYLKE 420


>gi|187478833|ref|YP_786857.1| histidyl-tRNA synthetase [Bordetella avium 197N]
 gi|123752254|sp|Q2KY92|SYH_BORA1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|115423419|emb|CAJ49953.1| histidyl-tRNA synthetase [Bordetella avium 197N]
          Length = 428

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 96/470 (20%), Positives = 180/470 (38%), Gaps = 56/470 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    RG  D          R  + +R   + YG+  + TP+LE +    + + +  D  
Sbjct: 7   KVSAIRGMNDVLPGPSAQWERFEEIVRAWLQGYGYRNVRTPILEQTRLFTRGIGEVTDIV 66

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D  +G+ +++R ++TA + R   E+      P R Y IGPVFR+E+   GR+
Sbjct: 67  EKEMYTFTDALNGESLTMRPEMTAGVVRAAIEHNMLYERPHRVYSIGPVFRHERPQRGRY 126

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q DV+ +G +    DAE+ +M+      +G+      +    +           + 
Sbjct: 127 RQFHQIDVEALGFAGPDIDAELIVMLGRLWNTLGLADIRLELNSLGQPAERAAHRAALIE 186

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +K  + L      D   +     +++L  +                      +  FL 
Sbjct: 187 YLEKHVDILD----EDGKRRLYTNPLRVLDTKNPALQEMA---------NAAPRLFDFLG 233

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                    + + +     G                         ++  +VRGL+YY   
Sbjct: 234 EASRAHFDGVCQRLDDAGIG-----------------------YSLNPRLVRGLDYYNLT 270

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          +    G+V GGGRYDGL+    G+  PA GF+IG+ RL+   +  
Sbjct: 271 VFEWVT--------DRLGSQGTVCGGGRYDGLIELLGGKPAPAVGFAIGVERLLDLWEQ- 321

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +   +      +  +     +        + LR AG+   +  G++ +F +Q K AD
Sbjct: 322 ---SAGQQTPPECEVYVVHQGEGAQRLAARVGEDLRDAGLSVIVHAGAA-SFKSQFKRAD 377

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLA-----KGKELSREIKNNESWREAR 470
                +A+I G  E +     +K L      +G +    +    S  +++
Sbjct: 378 ASGARVAVILGDDEVATKTASVKYLRADAAGEGAQDKVALATLASVLKSK 427


>gi|223984104|ref|ZP_03634256.1| hypothetical protein HOLDEFILI_01548 [Holdemania filiformis DSM
           12042]
 gi|223963898|gb|EEF68258.1| hypothetical protein HOLDEFILI_01548 [Holdemania filiformis DSM
           12042]
          Length = 430

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 98/490 (20%), Positives = 184/490 (37%), Gaps = 67/490 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             + PRG  D   +  R   ++ D IRN+ + YG++ I TP+ E +    +     D  N
Sbjct: 4   NYQTPRGTQDLLPEATRKWQKVEDLIRNLCDVYGYEEIRTPVFEDTRVFKRENDSSDMVN 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K +++        ++LR + TA + R   ++     +  P + Y +G +FR E+   GR+
Sbjct: 64  KEMYTFSVHGEDSLTLRPEGTAGVVRSFVQHKMYGRLEMPAKLYYMGEMFRYERPQKGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  ++N+G  +   DAE+  +    ++A+G+ +    I                  
Sbjct: 124 RQFNQFGIENIGMKSPLIDAEVIALGYSIVKALGLSQVKVLINTLGDDESRAAYRGAL-- 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  +  +     D   ++    ++LL  +   ++          + + +  +  +L+
Sbjct: 182 --REHFKDSVGELCADCQRRYEQNPLRLLDCKVDNEHP---------SMQNVPSLQQYLT 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + +    ++   +       +  ++L                       VRGL+YYT  
Sbjct: 231 PESKTYFDQVLAALDALEIPYEIDDKL-----------------------VRGLDYYTHT 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +   P            +V  GGRYDGLV  F G  +   GF++     ++ L   
Sbjct: 268 VFEVVSTHPES------GSQATVFAGGRYDGLVEYFGGPEMSGVGFAM-GLERLMILAEA 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           E      +    V +  + +               R AG   E  +   ++   Q K  D
Sbjct: 321 EQVELGEEASLDVYVMALGNVGTLP---LALATECRAAGYHTEFNI-QPRSLKAQFKSVD 376

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           RR   +A+I G  E +   + +K                     +  QITI   EL++T+
Sbjct: 377 RRKARVAVIAGESEAANHQINVK------------------FIEQQRQITIDQDELIATL 418

Query: 486 KKILQENKEE 495
               Q   EE
Sbjct: 419 DAYFQAEGEE 428


>gi|222100452|ref|YP_002535020.1| Histidyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572842|gb|ACM23654.1| Histidyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 385

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 175/432 (40%), Gaps = 52/432 (12%)

Query: 43  DPIETPLLEYSDSLGKFLPDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAEN-FD 100
           + I TP+ E ++   + + +E D   K +++ +D  G+ I+LR + TAP+ R   EN F 
Sbjct: 2   EEIRTPIFEQTELFVRSVGEESDIVQKEMYTFEDKGGRSITLRPEGTAPIVRAFLENSFV 61

Query: 101 TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
              F  R Y IGP+FR EK   GR RQF Q   +  GS +  AD E  + + + L+ +G+
Sbjct: 62  NRGFQQRYYYIGPMFRYEKPQSGRLRQFHQVGFEIFGSESPGADLETILAVDNFLKRLGL 121

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
            +   H            L  IG     K                      +  L E   
Sbjct: 122 TKYTIH------------LNSIGCPECRKNY--------------------REALREYYG 149

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
            +  D         E   + +    ID E +++             + + +L        
Sbjct: 150 KHLNDLCDDCKRRYETNILRLLDCKIDHELALNAPKSTDYLCEPCREHYEKLKDYLNEFE 209

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                  +     T+VRGL+YYT  V+E           +      ++ GGGRYDGL S 
Sbjct: 210 ------IKYVEDHTLVRGLDYYTRTVFEV--------RHEGLGAQNAIAGGGRYDGLFSD 255

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
             G  VPA GF+ GI R+++ALK+       +       I       D+  +       L
Sbjct: 256 LGGGTVPALGFAGGIERIVLALKAEGI---EVPRKNVHYIYVATIGEDAFKEGMKLAMEL 312

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R  G+  ++ +  ++N   QLK+ADR      +I G  E  +G++ +++L  G ++  + 
Sbjct: 313 RKKGLNVDVDI-MNRNLSGQLKHADRLGAKYVVIVGDEELEKGVVVLRNLETGDQVEIDK 371

Query: 461 KNNESWREARVA 472
           +    +   + +
Sbjct: 372 EFAIEYIFEKAS 383


>gi|254302703|ref|ZP_04970061.1| histidine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322895|gb|EDK88145.1| histidine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 412

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 101/463 (21%), Positives = 186/463 (40%), Gaps = 57/463 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              P+G  D   ++      I +  + ++ENYG+   +TP+ E ++   + + +  D   
Sbjct: 4   IRKPKGTKDIIGEDAVKYIYISNVTQKMFENYGYKFAKTPIFEETELFKRGIGEATDVVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +++ +D   + I+LR + TA + R   EN         R Y  G +FR E+   GR R
Sbjct: 64  KEMYTFKDKGDRSITLRPENTASMVRCYLENSIYAKEDISRFYYNGSMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKIGLH 185
           +F Q  V+  G  +   DAE+  M  + L  +G+   +  I     K    I  EK+  H
Sbjct: 124 EFNQIGVEVFGEKSPILDAEVIAMGYNWLAKLGVTDLEVKINSVGSKGSRTIYREKLVEH 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               L++        D  D+     ++  L + + D   DF        +    ++ +L 
Sbjct: 184 FKSHLDDM-----CEDCKDRINRNPLR--LLDCKVDGEKDFY-------KSAPSIIDYLF 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D  K   E+ + +                            +     T+VRGL+YY+  
Sbjct: 230 EDERKHYEEVKKYLT-----------------------IFGIKYTEDPTLVRGLDYYSST 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          K    G+V GGGRYD L+     +++PA GF+ G+ R+++ +   
Sbjct: 267 VFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKDIPAFGFAAGVERVMMLVDE- 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                         I        ++       + LR   I+  +   SSK     +K AD
Sbjct: 318 -------YPKDVPDIYIAWLGDSTVETAMKIAEDLRKNDIKVYVDY-SSKGMKAHMKKAD 369

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +      II G  E ++G++ +KD +  ++   +I+   ++ +
Sbjct: 370 KLETKYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIINYIK 412


>gi|119512876|ref|ZP_01631941.1| Histidyl-tRNA synthetase, class IIa [Nodularia spumigena CCY9414]
 gi|119462458|gb|EAW43430.1| Histidyl-tRNA synthetase, class IIa [Nodularia spumigena CCY9414]
          Length = 462

 Score =  226 bits (576), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 143/487 (29%), Positives = 218/487 (44%), Gaps = 44/487 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+    P GF +    E R+   +LD+IR ++E+YGF PIETP +E  + L    
Sbjct: 1   MAKSDKINFSTPSGFPEFLPSEKRLEVYLLDNIRKVFESYGFTPIETPAVERLEVLQAKG 60

Query: 61  PDEDRP------------NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
              D                      +   +  +L++D T PLA Y+A + + + FP   
Sbjct: 61  NQGDNIIYGIDPILPPNRQAEKEKAGETGSEARALKFDQTVPLAAYIARHLNELTFPFAR 120

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y+   VFR E+   GRFRQF QCD+D V     +   +  M    T     +   D+ I 
Sbjct: 121 YQTDVVFRGERAKDGRFRQFRQCDIDVVARRELSLLYDAQMPAIITEIFEAVNIGDFLIR 180

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           INNRKIL G  + +G+       +    +  ID L+K G   VK  L             
Sbjct: 181 INNRKILTGFFQSVGIAE----TKIKACIGIIDNLEKIGEAKVKQALETE---------- 226

Query: 229 GANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEK---GFNELVVISELVRKSG 283
              +  EQ   ++ F+SI+   E+ + +L  L +     E+   G  EL  +   VR  G
Sbjct: 227 --GVIPEQTQKIIDFISINGSVEEVLDKLKHLAENLPEAEQFNLGVTELATVITGVRNLG 284

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
            + NR  I  +I RGL+YYTG VYE  L              GS+  GGRY+ LV  F G
Sbjct: 285 VSENRFCIDLSIARGLDYYTGTVYETTLLG--------HEALGSICSGGRYEELVGTFLG 336

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
           + +P  G SIG++RLI  L  L++   N     P  +  ++  +D +  Y   +Q LR A
Sbjct: 337 EQMPGVGISIGLTRLISRL--LKAGILNTLSATPAQVMVVNMQADLMPIYLNVSQELRRA 394

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G+         +  G Q + AD++     +I G+ E +     +KDL  G+++   ++N 
Sbjct: 395 GLNVVTNFD-KRPLGKQFQLADKQGIQFCVIIGSEEAAAQKSSLKDLKSGEQIEVTLENL 453

Query: 464 ESWREAR 470
               + R
Sbjct: 454 AGEIKKR 460


>gi|289663423|ref|ZP_06485004.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 468

 Score =  226 bits (576), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 146/501 (29%), Positives = 231/501 (46%), Gaps = 69/501 (13%)

Query: 17  DCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKGVFSLQD 75
           +   +E     R+LD IR  YE +GF PIETP+ E SD  L K   + +R    V+ +Q 
Sbjct: 2   ELLPREQIAFQRMLDVIRRNYERFGFLPIETPVFELSDVLLTKSGGETER---QVYFVQS 58

Query: 76  ----------------DDG-QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
                           + G   ++LR+DLT PLARYVAE+   + FP R Y++  V+R E
Sbjct: 59  TGALANAAAAADEGAENGGLPELALRFDLTVPLARYVAEHEHDLSFPFRRYQMQRVYRGE 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GRFR+F QCD+D +G  A +   +  ++         +   D+ + +NNRK+L G 
Sbjct: 119 RAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFRVQLNNRKLLRGF 178

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E +G+   +    +L VLR +DK+DK G   V+  L            +G  + +EQ+ 
Sbjct: 179 FESLGVAEGE---LQLAVLREVDKIDKRGADYVRDTL----------VGEGFGIAAEQVA 225

Query: 239 IMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
            +++F+++  E     L +L      V  +    +G  EL  + ELV+  G   +   ++
Sbjct: 226 KILAFVAVRSEGHADALAQLQALEASVGASATLGEGIAELREVLELVKALGVPESAYCLN 285

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            +I RGL+YYTG VYE  L              GS+  GGRY+ L S +    +P  G S
Sbjct: 286 FSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYESLASHYTKSKLPGVGIS 337

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG++RL   L+         +     ++  M  D   L       + LR  GI  E+ + 
Sbjct: 338 IGLTRLFWQLREAGLIQGIAESSVQAMVALM--DETRLDDALDIARRLRIGGINTEVQM- 394

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             K  G Q +YA R      ++ G  E +RG++ +KDL   ++                 
Sbjct: 395 EPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLV-REQ----------------- 436

Query: 473 QITIPISELVSTVKKILQENK 493
           Q  +   EL ST++  L++ K
Sbjct: 437 QFDVARDELASTLQVELEQAK 457


>gi|227485268|ref|ZP_03915584.1| histidine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236728|gb|EEI86743.1| histidine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 428

 Score =  226 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 126/461 (27%), Positives = 211/461 (45%), Gaps = 36/461 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDE 63
             ++     G  +   ++    +R+ + I   ++ + F PI+TP++E ++    K   + 
Sbjct: 2   KIVKPSTIAGVMELLPEDQLAFDRMKNIIEETFKKFQFLPIDTPVIEKNEILFAKGGGET 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
               K ++ +  +  + +SLR+DLT PLARYVAE+F  + FP + Y I  V+R E++  G
Sbjct: 62  ---EKQIYEIASET-RDMSLRFDLTVPLARYVAEHFADLNFPFKRYHIAKVYRGERNQKG 117

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD+D +G ++     +             +   D    INNRK+L+G L  + 
Sbjct: 118 RYREFYQCDIDIIGHNSLAIANDAIPPRVIYEIFNKLDTPDVTFKINNRKLLNGFLNALD 177

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   VLR IDK DK G++  K  L E              + +++ D +++F
Sbjct: 178 I------TDTTDVLRLIDKKDKIGMENTKNELLEL-------------VDNQKADKILAF 218

Query: 244 LSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           ++ DL+ + +    +         +G  EL  +   +   G     IKI  +I RGL+YY
Sbjct: 219 IASDLKNEELLASLDDFVDNNLYREGLCELKTVYSYMIHLGIPDKNIKIDPSITRGLDYY 278

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG VYE  +              GSV  GGRY+ L   F  Q +P  G SIG++RL   L
Sbjct: 279 TGTVYETFVNGYE--------NIGSVSSGGRYEKLAENFSKQALPGVGMSIGLTRLFYQL 330

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K +     N   +  +LI  M  + +           L   G RA+++L   K    +  
Sbjct: 331 KEIGLVNTNESRLTDILIIPMSDEENF--YAIDILNKLHEEGKRADIYLEGGK-LKKKFS 387

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           YAD+     A I G  ER  G + I+++  G++   +  N 
Sbjct: 388 YADKVGVKYAYIIGQSEREEGKVTIRNMQTGEQELVDFANL 428


>gi|313141618|ref|ZP_07803811.1| histidyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130649|gb|EFR48266.1| histidyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 437

 Score =  226 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 139/459 (30%), Positives = 223/459 (48%), Gaps = 40/459 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K  +      GF D   KE   ++++L SI   +E +GF PIETP LEY++ L K  
Sbjct: 1   MECKMPITPRTLSGFKDRLPKEAYAKSQMLKSIVTSFEKFGFSPIETPHLEYAEILKKQG 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   K ++   D  G+ ++LR+DLT PLAR++++  + +  P + Y IG VFR E+ 
Sbjct: 61  --SDEIQKEMYHFIDHGGREVALRFDLTLPLARFISQYKNELGLPFKRYCIGNVFRGERA 118

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F QCD D +G+ +  +DAE+  ++  +L  +G+K  ++ I INNRKI +G+ E
Sbjct: 119 QKGRYREFTQCDFDFIGTQSIGSDAEIIQVIFQSLSDLGLK--NFTIHINNRKIFNGLCE 176

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +    D        +LR IDK+DK G   V   L E  +           LT  QI  +
Sbjct: 177 SLNAKED-----TTEILRIIDKIDKIGQDSVSKELQEKTS-----------LTLTQIQTL 220

Query: 241 VSFLSIDLEKSMHELYELV----KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           + F+++  E    +   L+          ++G  EL  + E++       +  +I+ +I 
Sbjct: 221 LDFIALKQEGDSLKFLSLLSPYKAYNQTLKEGLEELESLCEIL-APLIPQSFYQINLSIA 279

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL YYTG +YE  LG             GSV  GGRYD L   F  + +   G SIG+ 
Sbjct: 280 RGLGYYTGIIYETTLGDLPT--------LGSVCSGGRYDNLTQNFSNEKMSGVGASIGLD 331

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+  L+ L   T++      ++        ++L       + LR  GI+ E++    K 
Sbjct: 332 RLLAGLEELGLITSSTPAKAILIPL------NNLQYAYTTAKSLRELGIKIEVYPEVIK- 384

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
                KYA+ +     II G  E++     +K++  G++
Sbjct: 385 PQKAFKYANNKGYEWVIITGESEQATHSASLKNMQNGEQ 423


>gi|308493162|ref|XP_003108771.1| CRE-HARS-1 protein [Caenorhabditis remanei]
 gi|308248511|gb|EFO92463.1| CRE-HARS-1 protein [Caenorhabditis remanei]
          Length = 581

 Score =  226 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 130/476 (27%), Positives = 219/476 (46%), Gaps = 48/476 (10%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLP 61
           K  K   +  +G  D    +  +RN +L ++   +  YG + I+TP+ E  D L GK+  
Sbjct: 57  KPGKFVLKTGKGTRDYGPAQSALRNSVLQNVVETFNKYGAETIDTPVFELRDVLMGKYGE 116

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH- 120
           +     K V+ LQD  G+ +SLRYDLT P ARY+A N    +     Y+I  V+R ++  
Sbjct: 117 EG---GKLVYDLQDQGGELLSLRYDLTVPFARYLAMNK---ITNITRYQIAKVYRRDQPV 170

Query: 121 -GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F QCD D  G          C+ +   L    ++  ++ I +N+R IL+G+ 
Sbjct: 171 MTRGRYREFYQCDFDIAGQYDLMLPESECLGIVHELLT-KLEIGEFFINLNHRLILEGMF 229

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+   D       +  ++DKLDK     V+  + + +            LT EQ + 
Sbjct: 230 AVSGISPKD----FKSICSSVDKLDKTQWVEVEEEMIKEKF-----------LTKEQTEK 274

Query: 240 MVSFL-------SIDLEKSMHELYEL--VKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           +   +        +   + + ++ +L  +      +KG  EL V+   +   G  S R +
Sbjct: 275 LGQLVRFRELNSGLSNLELLEKMSQLPELGQNEKFKKGAEELKVLIGYLDVDGVTSVRYE 334

Query: 291 ISSTIVRGLEYYTGCVYEAILG--------FPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
            S  + RGL+YYTG +YEA+                  +PV  GSV  GGRYDGLV+ F 
Sbjct: 335 PS--LARGLDYYTGAIYEAVAPKALEGTAVEKSEETAGQPVGVGSVAAGGRYDGLVNMFD 392

Query: 343 -GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
               VP  G S GI RL   +++ +    N        +       + + + +   + LR
Sbjct: 393 AKLKVPCCGVSFGIERLFAIMEARQK---NTVRTTQTEVYVASAQKNLVLERKKLLRTLR 449

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            AGI++EM L ++     Q +YA+ R  PL ++ G  E   G+++++++   +E +
Sbjct: 450 AAGIKSEMPLKANPKLLTQFQYAEERRIPLVVLIGERELQEGIVKLRNVVSREEKA 505


>gi|67515529|ref|XP_657650.1| hypothetical protein AN0046.2 [Aspergillus nidulans FGSC A4]
 gi|40746209|gb|EAA65365.1| hypothetical protein AN0046.2 [Aspergillus nidulans FGSC A4]
          Length = 501

 Score =  226 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 127/523 (24%), Positives = 214/523 (40%), Gaps = 68/523 (13%)

Query: 3   KKTKLRAEL--PRGFADC---PTKEIRIR-NRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           K  KL  +L  P+G  D               I  +I  +++ +G   ++TP+ E  + L
Sbjct: 7   KSNKLSFQLKTPKGTRDLSYRLPLTYAFNSESIFSAITEVFKRHGGTQLDTPVFELKEIL 66

Query: 57  GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
                ++   ++ ++ L D  G+  +LRYDLT PLAR++A N  T V   + ++I  V+R
Sbjct: 67  AGKYGED---SRLIYDLADQGGEDSALRYDLTVPLARWLAMN--TSVQHIKRFQIAKVYR 121

Query: 117 NEKHG--PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
            ++     GR R+F QCD D  GS          + +   +      R+   I +N+RKI
Sbjct: 122 RDQPAVAKGRMREFYQCDFDIAGSYDPMIPDAEVLRIVVEVFEALNMRDYITIKLNHRKI 181

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           LDG+    G+ GD    +   +  A+DKLDK   + VKL + E              L  
Sbjct: 182 LDGLFGACGVPGD----KIRSISSAVDKLDKLPWEQVKLEMEEK------------GLAP 225

Query: 235 EQIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           E  D +  ++ +   + + +     +L+       KG  ++ ++ + +       ++I  
Sbjct: 226 EVADKVGQYVKLSGGRDILDTIRSDDLLSTNENVMKGVEDMELLFKYLEAFDVL-DKISF 284

Query: 292 SSTIVRGLEYYTGCVYEAILG--------------FPVMNEKQKPVVFGSVGGGGRYDGL 337
             ++ RGL+YYTG +YE +                    N + + +  GS+  GGRYD L
Sbjct: 285 DLSLARGLDYYTGLIYEVVTPLSSAEGFAQSQKKSKSKSNGEDQNIGVGSIAAGGRYDDL 344

Query: 338 VSRF-KGQNVPATGFSIGISRLIVALKSLESSTNNI----KEMGPVLITTMDHDSD---- 388
           V+ F K + +P  G S G+ R+   +K    +             V +  M         
Sbjct: 345 VNMFAKKRQIPCVGISFGVDRIFTIMKQRLENEAKEGNASMRASEVDVFVMAFGGKGFNG 404

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            L +       L  AGI+AE           Q K A+    PLA+I G  E + G +++K
Sbjct: 405 LLLERMSVANQLWKAGIKAEFAQTVKPKLPQQFKLAEAGGIPLAVILGEDELAAGKVKLK 464

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +L                         I   +LV  +KK L +
Sbjct: 465 EL------------GLPEGHPEKDGTLISREDLVEEIKKKLNK 495


>gi|262066990|ref|ZP_06026602.1| histidine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291379296|gb|EFE86814.1| histidine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 413

 Score =  226 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 100/463 (21%), Positives = 185/463 (39%), Gaps = 56/463 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              P+G  D   ++      I +  + ++ENYG+   +TP+ E +D   + + +  D   
Sbjct: 4   IRKPKGTKDIIGEDAVKYIYISNVTQEMFENYGYKFAKTPIFEETDLFKRGIGEATDVVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +++ +D   + I+LR + TA + R   EN         R Y  G +FR E+   GR R
Sbjct: 64  KEMYTFKDKGDRSITLRPENTASMVRCYLENSIYAKEDVSRFYYNGSMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKIGLH 185
           +F Q  V+  G  +   DAE+  M  + L  +GI   +  I     K    I  EK+  H
Sbjct: 124 EFNQIGVEVFGEKSPILDAEVIAMGYNFLTKLGITDLEVKINSVGSKGSRTIYREKLVEH 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               L++        D  D+     ++LL  +   D             +    ++ +L 
Sbjct: 184 FQSHLDDM-----CEDCKDRINRNPLRLLDCKVDGDKDFY---------KSAPSIIDYLF 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D  K   E+ + +                            +     T+VRGL+YY+  
Sbjct: 230 EDERKHYEEVKKYLT-----------------------IFGVKFTEDPTLVRGLDYYSST 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          K    G+V GGGRYD L+     +++PA GF+ G+ R+++ +   
Sbjct: 267 VFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKDIPAFGFAAGVERVMMLI--- 315

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                +        +       +++         LR   ++  +   SSK   + +K AD
Sbjct: 316 ----GDNYPKDVPDVYIAWLGENTIETAMKIADSLRKENVKVYVDY-SSKGMKSHMKKAD 370

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +      II G  E ++G++ +KD +  ++   +I+   +  +
Sbjct: 371 KLETRYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIINHIK 413


>gi|262039269|ref|ZP_06012587.1| histidine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746763|gb|EEY34284.1| histidine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 412

 Score =  226 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 89/455 (19%), Positives = 178/455 (39%), Gaps = 54/455 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPNKGVF 71
           +G  D    +++  + I+D+ + ++  YGF+ I TP+LE ++   + +  + D  +K ++
Sbjct: 6   KGMKDRYFDDVKKYDFIVDTAKKVFTKYGFERIITPILEETELFRRSVGDETDVVSKEMY 65

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFRQFIQ 130
             +D   + ++LR + TA + R   E       P  + +  GP++R E    GR+R+F Q
Sbjct: 66  DFKDKGERNVTLRPEGTAGVVRAYLEAGLHKSDPVVKWFYNGPMYRYEAPQKGRYREFHQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              +  G  +   DAE+  M  + LE +GI      +            +K      + +
Sbjct: 126 IGAEIFGIRSPYLDAEVIKMGCEFLEKLGITGLTVELNSLGNLESR---KKYIDDLKEFM 182

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            +RL  L   D   ++    ++ L  + + D             +    +  +L  + +K
Sbjct: 183 AQRLDKLS-EDSKKRYEKNPLRALDSKDKGDQEQ---------FKDAPKLYDYLDEESKK 232

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              +    ++                           +   +  +VRGL+YY+  V+E  
Sbjct: 233 YFEDTKRYLE-----------------------ILGVKYVENPKLVRGLDYYSDTVFEI- 268

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                  +  K     +V  GGRYD L+       +PA GF+ G+ R  + +        
Sbjct: 269 -------KSDKLGAQATVLAGGRYDRLLEILDNVKIPAIGFAAGMERAAMLMDESLLEQK 321

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
             K    + +   D   +         + LR  GI+      + K+F  Q+K A++ N  
Sbjct: 322 EEK----IYVVYFDETKEYF---IKTVEELRKKGIKVNFDY-NPKSFSAQMKKANKINAE 373

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             +I G  E+   ++ +K  + G++    +K    
Sbjct: 374 YVLILGEEEQKENVVTLKRFSTGEQEKYNLKEVIE 408


>gi|71898430|ref|ZP_00680602.1| Histidyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
 gi|71731743|gb|EAO33802.1| Histidyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
          Length = 466

 Score =  226 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 144/509 (28%), Positives = 228/509 (44%), Gaps = 68/509 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGVLELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
               V+      G               ++LR+DLT PLARYVAE    + FP R Y+I 
Sbjct: 62  ---QVY-FVQSTGTLANAAESGATRLPELALRFDLTVPLARYVAEYEHVLAFPFRRYQIQ 117

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GRFR+F QCD+D +G    +   +  ++         +   D+ + +NNR
Sbjct: 118 RVYRGERAQRGRFREFYQCDIDVIGKQTLSIRYDAEVLAVIHAVFSELGIGDFQVQLNNR 177

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+L G LE  G+   +    +L +LR +DKLDK G+  V+  L            +G  +
Sbjct: 178 KVLRGFLESQGVRDGE---LQLAILREVDKLDKRGVLDVRDTL----------IGQGFGI 224

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYEL--------VKGTIAGEKGFNELVVISELVRKSGY 284
            + Q++ +++F++         L  L                +G  EL  +  LV   G 
Sbjct: 225 PAAQVENILTFVATRSTSHADALARLDALIEDSGPGSHDMLRQGVAELREVLTLVNVLGV 284

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
             +  +++ +I RGL+YYTG VYE  L              GS+  GGRY+ L + +   
Sbjct: 285 PEHAYRLNFSIARGLDYYTGTVYETALI--------NHHQIGSICSGGRYENLANHYTQS 336

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +P  G SIG++RL   L+         +     ++  M  D  +L       + LR  G
Sbjct: 337 KLPGVGISIGLTRLFWQLRDAGLIDGIAESSVQAMVVLM--DEATLDDALDIARCLRIGG 394

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I  E+ +  +K    Q +YA R      ++ G  ER+RG++ +KDL   ++         
Sbjct: 395 INTEVQM-EAKKLSKQFQYASRAGIRFVVLAGDDERARGVVAVKDL-TREQ--------- 443

Query: 465 SWREARVAQITIPISELVSTVKKILQENK 493
                   Q  IP  EL ST++  L++ K
Sbjct: 444 --------QFEIPREELASTLQVELEQAK 464


>gi|148244761|ref|YP_001219455.1| histidyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166228628|sp|A5CWE8|SYH_VESOH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|146326588|dbj|BAF61731.1| histidyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 422

 Score =  226 bits (575), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 97/476 (20%), Positives = 187/476 (39%), Gaps = 63/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF- 59
           M K    + +  RG  D   K   +   +  +I +++  YG+  I TP++E +D+  +  
Sbjct: 1   MSK----KIQAIRGMNDLLPKNSALWLSLEKTIFDLFITYGYQNIRTPIVEKTDTFCRAI 56

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             D D   K ++S ++  G+ +SLR + TA   R + E+        + +  G +FR+E+
Sbjct: 57  GGDTDIVEKEMYSWKETSGESLSLRPEGTAGCVRMMIEHNLPRESIQKVFYQGAMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR----NDYHIGINNRKIL 175
              GR+RQF Q  ++  G     ADAE+ ++M    + +G+K      +       R   
Sbjct: 117 PQKGRYRQFHQVGLEIFGVFNAKADAELMIIMHALWQTIGLKNIVLEINTLGSNEVRNAY 176

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
             IL        ++LNE        D L +      ++L  + +  +S        L S+
Sbjct: 177 RKILVAYFNQHKNQLNE--------DGLKQLKTNPFRILDSKNKAIHS--------LISD 220

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               ++ +L     +   +    +                          +    I++++
Sbjct: 221 -APKLMDYLDKKSIQHFKQFKSYLDAL-----------------------NITYVINTSL 256

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY   V+E                  ++  GGRYDGL+ +  G   PA G +IG+
Sbjct: 257 VRGLDYYNRTVFEWTTTD--------LGTQSTICAGGRYDGLIEKMGGTPTPAVGLAIGL 308

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS- 414
            RL++ L++    +        + I  +        K      +L        ++   + 
Sbjct: 309 ERLVLLLEAQNLISTK----STLSIYLIAFGKKEQIKSIQIANVLHDELPNVILYNDLTL 364

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREA 469
            +F +Q + AD+     A+I G  E +   + IK L   G + +  ++    + + 
Sbjct: 365 GSFKSQFEKADKAKANFALILGEQELNNNQISIKPLRNQGTQQTMNLEEAIKYFKE 420


>gi|237740163|ref|ZP_04570644.1| histidyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422180|gb|EEO37227.1| histidyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 413

 Score =  226 bits (575), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 101/463 (21%), Positives = 185/463 (39%), Gaps = 56/463 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              P+G  D   ++      I +  + ++ENYG+   +TP+ E +D   + + +  D   
Sbjct: 4   IRKPKGTKDIIGEDAVKYIYISNVTQEMFENYGYKFAKTPIFEETDLFKRGIGEATDVVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +++ +D   + I+LR + TA + R   EN         R Y  G +FR E+   GR R
Sbjct: 64  KEMYTFKDKGDRSITLRPENTASMVRCYLENSIYAKEDVSRFYYNGSMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKIGLH 185
           +F Q  V+  G  +   DAE+  M  + L  +GI   +  I     K    I  EK+  H
Sbjct: 124 EFNQIGVEVFGEKSPILDAEVIAMGYNFLTKLGITDLEVKINSVGSKGSRTIYREKLVEH 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               L++        D  D+     ++LL  +   D             +    ++ +L 
Sbjct: 184 FQSHLDDM-----CEDCKDRINRNPLRLLDCKVDGDKDFY---------KSAPSIIDYLF 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D  K   E+ + +                            +     T+VRGL+YY+  
Sbjct: 230 EDERKHYEEVKKYLT-----------------------IFGVKFTEDPTLVRGLDYYSST 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          K    G+V GGGRYD L+     +++PA GF+ G+ R+++ +   
Sbjct: 267 VFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKDIPAFGFAAGVERVMMLI--- 315

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                +        +       D++         LR   ++  +   SSK   + +K AD
Sbjct: 316 ----GDNYPKDVPDVYIAWLGDDTIETAMKIADSLRKENVKVYVDY-SSKGMKSHMKKAD 370

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +      II G  E ++G++ +KD +  ++   +I+   +  +
Sbjct: 371 KLETKYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIINHIK 413


>gi|254383603|ref|ZP_04998953.1| histidyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342498|gb|EDX23464.1| histidyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 419

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 94/476 (19%), Positives = 174/476 (36%), Gaps = 70/476 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D           + D+I       G+  +ETP  E  D   + + +  D  
Sbjct: 3   TFKAPKGTYDLIPPYSAKYLAVRDAISGPLRLSGYGYVETPGFEDVDLFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF--PCRTYRIGPVFRNEKHGPGR 124
            K +++L    G  ++LR + TA + R   E         P + +  G  +R E+   GR
Sbjct: 63  TKEMYTLTTKGGANLALRPEGTASVLRAALEANLHKAGGLPVKLWYSGSYYRYERPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++       +G++          D       R+ L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRTLGLRNFRILLNSLGDQECRPVYREALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  + L  +      +  LR +D         V+  L                     
Sbjct: 183 TFLRGLDLDEETVRRAEINPLRVLDDKRP----EVQKQL-------------------AG 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++ ++L    +    E+  L+       +   +L                       V
Sbjct: 220 APMLRAYLCDACKAYHEEVRALITAAGVTFEDDEKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     +         +       ++          LR +GI A++  G  K 
Sbjct: 309 RTVLALEAEGVELDIPAATSVFAVAL----GEAKPVLFGLVTELRKSGIAADISYG-GKG 363

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +K A+R     A++ G  + + G++Q+KD+  G++    +        AR+A
Sbjct: 364 LKGAMKDANRSGARFAVVAGDRDLAEGVVQLKDMESGEQSPVALAEVAEVLRARLA 419


>gi|15838813|ref|NP_299501.1| histidyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|32130151|sp|Q9PBC2|SYH_XYLFA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|9107369|gb|AAF85021.1|AE004034_11 histidyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 466

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 145/509 (28%), Positives = 229/509 (44%), Gaps = 68/509 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGVLELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
               V+      G               ++LR+DLT PLARYVAE    + FP R Y++ 
Sbjct: 62  ---QVY-FVQSTGTLANAAESGATRLPELALRFDLTVPLARYVAEYEHVLAFPFRRYQMQ 117

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GRFR+F QCD+D +G    +   +  ++         +   D+ + +NNR
Sbjct: 118 RVYRGERAQRGRFREFYQCDIDVIGKQTLSIRYDAEVLAVIHAVFSELGIGDFQVQLNNR 177

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+L G LE  G+   D    +L VLR +DKLDK G+  V+  L            +G  +
Sbjct: 178 KVLRGFLESQGVRDGD---LQLAVLREVDKLDKRGVLDVRDTL----------IGQGFGI 224

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYEL--------VKGTIAGEKGFNELVVISELVRKSGY 284
            + Q++ +++F++         L  L         +      +G  EL  +  LV   G 
Sbjct: 225 PAAQVENILTFVATRSTSHADALVRLDALIEDSGPEAHEMLRQGVAELREVLTLVNVLGV 284

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
             +  +++ +I RGL+YYTG VYE  L              GS+  GGRY+ L + +   
Sbjct: 285 PEHAYRLNFSIARGLDYYTGTVYETSLI--------NHPQIGSICSGGRYENLANHYTQS 336

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +P  G SIG++RL   L+         +     ++  M  D  +L       + LR  G
Sbjct: 337 KLPGVGISIGLTRLFWQLRDAGVMDGIAESSVQAMVVLM--DEATLDDALDIARCLRIGG 394

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I  E+ +  +K    Q +YA R      ++ G  ER+RG++ +KDL   ++         
Sbjct: 395 INTEVQM-EAKKVSKQFQYASRAGIRFVVLAGDDERARGVVAVKDL-TREQ--------- 443

Query: 465 SWREARVAQITIPISELVSTVKKILQENK 493
                   Q  IP  EL ST++  L++ K
Sbjct: 444 --------QFEIPREELASTLQVELEQAK 464


>gi|262374931|ref|ZP_06068165.1| histidyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309944|gb|EEY91073.1| histidyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 431

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 97/476 (20%), Positives = 175/476 (36%), Gaps = 70/476 (14%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   +  + + YG+  I  P++E ++   + + D  D   K ++
Sbjct: 8   KGFNDILPTQTPAWRRLEQHLSGLMDAYGYQQIRLPIVEQTNLFKRSIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + IGP+FR EK   GR+RQF 
Sbjct: 68  TFLDKGNPPESLTLRPEGTAGCVRAMLEHNLLRGATPRVWYIGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILE 180
           Q  V+  G +    DAE+ +M A   + +G             +       R  L   LE
Sbjct: 128 QFGVETFGVATPDMDAELILMTARLWKRMGVADKVQLELNTLGESDERAAYRAALVEFLE 187

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 D+            D   +     +++L  +     S           E    +
Sbjct: 188 SHKADLDE------------DSQRRLTTNPLRILDSKDAKTQS---------ILENAPKL 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             F+                    GE+       + + +  +G       I+  +VRGL+
Sbjct: 227 HDFM--------------------GEETLAHFAQLQQYLTDAG---VSFVINQKLVRGLD 263

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E                 G+V  GGRYDGLV + KG+   +         +  
Sbjct: 264 YYNKTVFEWTTT--------HLGSQGTVCAGGRYDGLVGQLKGKADQSVPAVGFAMGIER 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKN 416
            L  LE   +N       +      +  S  K  +  + +R     AG +  + +GS  +
Sbjct: 316 LLLLLEQVEDNTPTRDCEVFLVA--EPASQGKALVIAEQIRDQLEAAGSQVRLKVGSQGS 373

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             +Q+K AD+     A I G  E       +K+LA  ++ +    +  ++   +++
Sbjct: 374 MKSQMKKADQAGALYAAILGERELEAQAFTVKELATAEQSNVPFTDFVAFFSTKIS 429


>gi|324999166|ref|ZP_08120278.1| histidyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 435

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 90/460 (19%), Positives = 164/460 (35%), Gaps = 68/460 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  +    +      + D++       G+  IE P+ E +    + + +  D  +K +
Sbjct: 22  PKGIPEYLPTDSAGFVHVRDTLAAAAARAGYGYIELPVFEDTGLYARGVGESTDVVSKEM 81

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+RQ  
Sbjct: 82  YTFADRGERSVTLRPEGTAGVVRSVIEHNLDKQGLPVKLRYAGPFFRYERPQAGRYRQLQ 141

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEK 181
           Q  V+ +G      DAE+  +  +  +A+G            D       R+ L   L  
Sbjct: 142 QVGVEAIGVDDPALDAEVIAVADEGFKALGLTGYRLELTSLGDAECRPAYRERLQEFLSG 201

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + L    +    +  LR +D                           GA L       ++
Sbjct: 202 LDLDEATRERAAINPLRVLDDK----------------RPEVRAAMAGAPL-------LM 238

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             LS    +   ++   +                                +  +VRGL+Y
Sbjct: 239 DHLSDASAEHHAQVLAHLDDLGVA-----------------------YTANPRMVRGLDY 275

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E +                 +GGGGRYDGL++   G  +   GF IG+ R ++A
Sbjct: 276 YTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMATLGGPELSGVGFGIGVDRTLMA 327

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             +               +  +     +  +  +    LR  G+R ++  G  +     +
Sbjct: 328 CAAEGVQPWTTARAE---VFGVPLGDAAKRRLVVVAAELRARGVRVDLSYG-GRGLKGAM 383

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           K ADR     A++ G  +   G + +KDLA G++    + 
Sbjct: 384 KSADRSGARFALVLGDRDLENGTVGLKDLASGEQQDVPLD 423


>gi|298529646|ref|ZP_07017049.1| histidyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511082|gb|EFI34985.1| histidyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 419

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 100/468 (21%), Positives = 188/468 (40%), Gaps = 61/468 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +  K++     GF D    E      + D  R I+  Y +  + TP+LE ++   + +
Sbjct: 1   MSRVNKIK-----GFFDLFPPESTSYTFMEDKAREIFARYAYQELRTPILEQTELFARSI 55

Query: 61  P-DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNE 118
             D D   K ++   D  G+ +++R + TA + R   ++         R + +GP+FR E
Sbjct: 56  GQDTDVVQKEMYIFPDRRGRSLTMRPEATAGVIRAYIDSPAASSGNVSRFFTLGPMFRYE 115

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDG 177
           +   GR RQF Q + + +G  +  ADAE+  M+   L+++G+K     I          G
Sbjct: 116 RPQKGRTRQFHQVNAEMLGEDSPYADAEILSMLWGYLQSLGLKELVLEINSLGCPACRPG 175

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
              K+    +         +   D   + G   +++L  +           G    + + 
Sbjct: 176 FDAKLKSFLE----GINRDVFCEDCQRRAGSNPLRVLDCKA---------AGCREVASEA 222

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +V  L  + ++    +  ++K                             +++  +VR
Sbjct: 223 PRIVDNLCPECKEHFDRVLGILKSF-----------------------DIYYELNPFLVR 259

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY    +E I                +V GGGRYDGLV    G  VP  GF+ G+ R
Sbjct: 260 GLDYYQRTTFEVISND--------IGSQSAVAGGGRYDGLVKVLGGPEVPGIGFACGMER 311

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L + L+ ++    +                D+L K  +  + LR+ G R EM     ++ 
Sbjct: 312 LALLLQGIQERPMD--------FYMAVLHEDALDKAMLMVRRLRSKGYRGEMSFQV-RSV 362

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            + L+ A+++N    ++ G  E  +  +Q+KD++ G + +    + E 
Sbjct: 363 KSHLRQANKKNVKTCLLLGLDEMHKNQVQVKDMSTGVQRAVSQDDAEQ 410


>gi|71274443|ref|ZP_00650731.1| Histidyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon]
 gi|71900439|ref|ZP_00682571.1| Histidyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
 gi|170730542|ref|YP_001775975.1| histidyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|229470710|sp|B0U3B6|SYH_XYLFM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71164175|gb|EAO13889.1| Histidyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon]
 gi|71729804|gb|EAO31903.1| Histidyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
 gi|167965335|gb|ACA12345.1| Histidine--tRNA ligase [Xylella fastidiosa M12]
          Length = 466

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 145/509 (28%), Positives = 228/509 (44%), Gaps = 68/509 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF P+ETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGVLELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
               V+      G               ++LR+DLT PLARYVAE    + FP R Y+I 
Sbjct: 62  ---QVY-FVQSTGTLANAAESGATRLPELALRFDLTVPLARYVAEYEHVLAFPFRRYQIQ 117

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GRFR+F QCD+D +G    +   +  ++         +   D+ + +NNR
Sbjct: 118 RVYRGERAQRGRFREFYQCDIDVIGKQTLSIRYDAEVLAVIHAVFSELGIGDFQVQLNNR 177

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+L G LE  G+   +    +L VLR +DKLDK G+  V+  L            +G  +
Sbjct: 178 KVLRGFLESQGVRDGE---LQLAVLREVDKLDKRGVLDVRDTL----------IGQGFGI 224

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYEL--------VKGTIAGEKGFNELVVISELVRKSGY 284
            + Q++ +++F++         L  L                +G  EL  +  LV   G 
Sbjct: 225 PAAQVENILTFVATRSTSHADALARLDALIEDSGPGSHDMLRQGVAELREVLTLVNVLGV 284

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
             +  +++ +I RGL+YYTG VYE  L              GS+  GGRY+ L + +   
Sbjct: 285 PEHAYRLNFSIARGLDYYTGTVYETSLI--------NHPQIGSICSGGRYENLANHYTQS 336

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +P  G SIG++RL   L+         +     ++  M  D  +L       + LR  G
Sbjct: 337 KLPGVGISIGLTRLFWQLRDAGLMDGIAESSVQAMVVLM--DEATLDDALDIARCLRIGG 394

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I  E+ +  +K    Q +YA R      ++ G  ER+RG++ +KDL   ++         
Sbjct: 395 INTEVQM-EAKKVSKQFQYASRAGIRFVVLAGDDERARGVVAVKDL-TREQ--------- 443

Query: 465 SWREARVAQITIPISELVSTVKKILQENK 493
                   Q  IP  EL ST++  L++ K
Sbjct: 444 --------QFEIPREELASTLQVELEQAK 464


>gi|254446503|ref|ZP_05059979.1| histidyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198260811|gb|EDY85119.1| histidyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 440

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 120/484 (24%), Positives = 205/484 (42%), Gaps = 53/484 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            LP GF +   ++   R  I    R +   + F   + P+LE  +        E      
Sbjct: 6   SLP-GFREFYPEDYAQRKHIFQIWRQVARRFAFKEFDGPVLESLELFTAKSGPE--IESQ 62

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +F  +D  G+ +SLR +LT  LAR VA   + +  P + + IG  FR E+   GR R F 
Sbjct: 63  LFCFEDKGGRQVSLRPELTPSLARMVAARANGLKRPIKWFSIGDNFRYERMQKGRLRCFT 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q +VD +G     A+ E+  ++  TL   G+   D+ + +++R +    LE +G   +  
Sbjct: 123 QLNVDLLGEPGPAAEVELIALLVQTLLGFGLSEEDFFVRLSDRNLWMLYLETLGYDEE-- 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 +L  +DK ++   + +   L E   +            +E    +  FL +D  
Sbjct: 181 --AIGGILGVVDKWERLPEEKLLAQLQEVAGER----------AAELKAAVDGFLKLDSV 228

Query: 250 KSMHELYELVKGT----IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           + +   +  ++       A      +   + E +   G  ++ IKI  +IVRGL YYTG 
Sbjct: 229 EGIRSCFAELEQDAASAEALAARLADWQQLLEGLGAMG-LADFIKIDLSIVRGLAYYTGF 287

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+EA           K   F ++ GGGRYD LV +  G ++PA GF +G   L   LK+ 
Sbjct: 288 VFEAF---------DKKGEFRALAGGGRYDALVEKMGGPDMPAVGFGMGDVVLGELLKAR 338

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +  +       +  D++ L+  +    +LR AG   E  L   + FG Q K A 
Sbjct: 339 GKMPEFVDTVD--FFAVIGGDAEKLAVLEEVA-LLRQAGYSVEYQLK-PQAFGKQFKAAT 394

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                 A+I G+ E  +G++++++LA   E                    IP  +L+  V
Sbjct: 395 SSGARFALIVGSEELEKGVVKLRNLADRSE------------------QEIPRGQLLEAV 436

Query: 486 KKIL 489
           + ++
Sbjct: 437 RGLI 440


>gi|296533063|ref|ZP_06895707.1| histidine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296266607|gb|EFH12588.1| histidine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 436

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 103/487 (21%), Positives = 180/487 (36%), Gaps = 70/487 (14%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNK 68
           +  RG  D      R  + ++++ R++   YG +   TP+ E +    + L D  D   K
Sbjct: 2   QPVRGTKDLIGDAFRRHHHVVETARHVTGLYGLEEWATPIFEATGVFARTLGDTSDVVTK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQ 127
            ++S +D  G  ++LR + TA + R +  N  T    P + +  GP+FR E+   GR+RQ
Sbjct: 62  EMYSFEDRGGDSVTLRPEGTAGICRALVSNGLTQGGLPRKVFYAGPMFRYERPQKGRYRQ 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKI 182
           F Q   + +G++   ADAE+       L+ +GI        +      +R      L   
Sbjct: 122 FHQIGAEILGAAEPLADAEVIACGWQILQHLGIDDGVVLEINTLGDAPSRDAYRAALVAY 181

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                DKL        + D   +     +++L  +   D +                +  
Sbjct: 182 FTAHRDKL--------SADSQTRLEKNPMRILDSKDAGDKA---------LVADAPTIFE 224

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L+                     +       +   + + G      + +  IVRGL+YY
Sbjct: 225 HLTP--------------------EAATFFEKVLGHLDRFGVP---YRKNPRIVRGLDYY 261

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +   +E +          +    G+V  GGRYDGLV    G   P+ G++ GI RL   L
Sbjct: 262 SHTAFEFVT--------DRLGAQGTVMAGGRYDGLVQEMGGPATPSVGWAAGIERLSELL 313

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                            +  +              QMLR +G+ AEM      N   +++
Sbjct: 314 AE--------TPEATRPVAVIPVSEAEEGPALALLQMLRASGVPAEMAYKG--NLKKRME 363

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA-----QITIP 477
            A+R     A+I G  E +  ++ +++L  G +    I    S   A        +  + 
Sbjct: 364 RANRIGAQAAVILGESEVAENVVLVRNLQDGTQERVGIPGLLSALAAAGVVDAMLEQVVE 423

Query: 478 ISELVST 484
             ELV+ 
Sbjct: 424 GLELVAE 430


>gi|327398592|ref|YP_004339461.1| Histidyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181221|gb|AEA33402.1| Histidyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 410

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 96/463 (20%), Positives = 174/463 (37%), Gaps = 58/463 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNK 68
           E+ RGF D   ++I+   ++    R   E++G+  I TP+LE +    + + +  D   K
Sbjct: 2   EILRGFKDILPQDIKKWQKLEKVARETLESFGYKEIRTPILEKTSLFARSVGETTDIVEK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D  G+ ++LR + TA   R   +N        + Y IGP+FR E+   GR RQF
Sbjct: 62  EMYIFLDKSGESVTLRPEGTAGTVRAFIDNHLENYPFKKYYYIGPMFRYERPQKGRLRQF 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLHGD 187
            Q  ++  G      DAE+ ++    L+ + I      I             +++  +  
Sbjct: 122 HQIGIEVFGIDNPAVDAEVVLVDKIMLDKLNISDLRIEINNIGCPDCRPEYSKRLKEYFQ 181

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               E        D   +     +++L  +  T +           ++    ++ F+   
Sbjct: 182 LHKGEL-----CDDCRRRLDRNPLRILDCKNNTCSQ---------IAKGAPKIIEFVCDS 227

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +    ++   +       +    L                       VRGL+YYT  V+
Sbjct: 228 CKNHYEKVKNNLTALGIEFEENPHL-----------------------VRGLDYYTKFVF 264

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E I          K    G+V  GGRYD LV +  G+     GF+ G  RLI  +     
Sbjct: 265 EIIT--------DKLGAQGTVSAGGRYDNLVEQLGGKPTSGIGFASGCERLINLMDE--- 313

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                 E   +     + D D         + L   G    +    S++  + LK AD+ 
Sbjct: 314 -----DETQGIDYYIANLDEDV--YAMDIARKLSLTGRSVYVEY-ESRSLKSMLKKADKM 365

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           N    +I G  E+++G++ +KD+    +  +++        AR
Sbjct: 366 NARFVVIVGENEKNKGIIIVKDMEDSTQEEKQVNKFIEDEVAR 408


>gi|226310121|ref|YP_002770015.1| histidyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226093069|dbj|BAH41511.1| histidyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 433

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 130/464 (28%), Positives = 217/464 (46%), Gaps = 37/464 (7%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +  +G  D   +E   RN I  ++  ++E YG  P+ETP+L++ + L       D   K
Sbjct: 6   LKTVKGTKDFMPQEQMQRNWIRRTLEAVFETYGCKPLETPMLQHYELLASKYGGGDEILK 65

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            V+ L D   + + LRYDLT PL + V  N   +  P + Y IG VFR+     GR R+F
Sbjct: 66  EVYRLNDQGDRELGLRYDLTVPLTKVVGMN-PEMRMPFKRYEIGKVFRDGPVKTGRLREF 124

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           IQCDVD VG+++  A+AE+  M  +  + +G+   D +I +NNRK+L G+L+++G+  + 
Sbjct: 125 IQCDVDIVGTTSVLAEAELLSMAFEAFKRLGL---DVYIEVNNRKLLSGVLQELGVPVER 181

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
             +  L    ++DKL+K G+ GV+  L E             N+    +  + SFL  + 
Sbjct: 182 AGDVML----SLDKLEKIGVDGVRDDLRER------------NVEESLVLAITSFLQ-EG 224

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
             ++  L E    +   ++G  EL  +   V  +G  +  ++ S  + RGL  YTG VYE
Sbjct: 225 VITLDLLKERFT-SPLVQEGIRELREMLAYVTGAGV-AGELRFSPFLARGLGIYTGIVYE 282

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             L    M              G   D        +  PA G S G+  ++ AL +    
Sbjct: 283 IFLQDGSMTSSIGSGGRYDQIIGRLLDDG------REYPAVGISFGLDVILAALANRN-- 334

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
               +    VL+  +  ++ SL         LR +GIR E+ L + +     L YA++  
Sbjct: 335 -TEEQRAADVLVIPLGTEASSLG----LANRLRESGIRVELEL-TGRRLKKALDYANKEG 388

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              A+I G  E + G + ++D+ +G E    ++  E W   +++
Sbjct: 389 FAFALIYGENEVNSGQVVVRDMREGTEQPVPLELVEKWLSDKLS 432


>gi|297180647|gb|ADI16857.1| histidyl-tRNA synthetase [uncultured alpha proteobacterium
           HF0010_13E22]
          Length = 469

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 104/467 (22%), Positives = 173/467 (37%), Gaps = 54/467 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           R +  RG  D     +    +++   R     YGF  + TP+ E+++   + L D  D  
Sbjct: 52  RLQPARGTTDLMPAAMAGHQQVIGKARAAAGLYGFQEMATPMFEFAEVFSRPLGDSSDVV 111

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K  ++  D  G+ ++LR + TA + R +  N  T   P + +  GP+FR E+   GR R
Sbjct: 112 TKETYNFTDRGGETLTLRPENTAGVVRAMISNGLTQSLPLKFFYAGPMFRYERPQKGRMR 171

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  ++ +G     ADAE+    A  L+ +G+  +   + +N+    +   +      
Sbjct: 172 QFHQIGIEYLGPRDGLADAEIIGCGARILDDLGV-LDRCTLHLNSLGDSES-RQAYRAAL 229

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            D LN     L   D   +     +++L  +   D +            +   + +FL+ 
Sbjct: 230 VDFLNAHEADLS-EDSRTRLTSNPLRILDSKDAGDRA---------IIAEAPRLDAFLND 279

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                   +   + G                                 +VRGL+YY    
Sbjct: 280 GSRWHFDSVTGALDGA-----------------------GISWSFDPLLVRGLDYYCHTA 316

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I               G+V GGGRYDGL     G  VP  G++ G+           
Sbjct: 317 FEFIT--------DALGAQGTVLGGGRYDGLSEMLGGPPVPGVGWAAGV--------ERL 360

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +            +  M  D D+        + LR  GI     L +    G +LK ADR
Sbjct: 361 AMLVGDVVPAAPRVAVMPTDGDAEGAAFALAESLRGVGIAV--DLPAGGAIGKRLKKADR 418

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +A+I G+ E + G  QI+DL  GK+         S     + +
Sbjct: 419 AGVRIAVILGSDEVAGGSAQIRDLGAGKQQEVPQAELASVLHGMLGE 465


>gi|109948052|ref|YP_665280.1| histidyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123173213|sp|Q17VP5|SYH_HELAH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|109715273|emb|CAK00281.1| hisS [Helicobacter acinonychis str. Sheeba]
          Length = 442

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 135/455 (29%), Positives = 222/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+++L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLSKVSVVFQSFGFVPIETPHLEYAETLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D  G+ ++LR+DLT PLAR+V+    T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGGRDVALRFDLTVPLARFVSLYHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVVIASLKALDL--EDFCVSINHRKILNGICEYFGIS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   VLR +DKL+K GL GV+  L +             +L    I  ++  + I
Sbjct: 177 -----QVTGVLRIVDKLEKIGLNGVEEELKKE-----------CDLNPNTIKGLLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             +     +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQDDLSHAEFFEKIAYLKDCNENLKKGIQDLEKLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +++   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNDMK--------SLGSVCSGGRYDHLTKNFSKEDLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +     + +  S      + LR +GI +E++   ++      
Sbjct: 333 LSGMQLLD---ERSTQAKVLIACMNEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      I G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAIIGEEEFKSETLSLKNMHSGMQL 423


>gi|323466686|gb|ADX70373.1| Histidyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 416

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 103/452 (22%), Positives = 173/452 (38%), Gaps = 57/452 (12%)

Query: 20  TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGVFSLQDDDG 78
            ++     ++ ++ RN +    +  I TP  E  +   +   D  +   K ++   D  G
Sbjct: 2   PEQSGSWQKVEETARNFFNRANYREIRTPSFENYEIFSRSSGDSSEIVEKQMYDFNDKGG 61

Query: 79  QWISLRYDLTAPLARYVAENFDTIV---FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
           + I+LR + TA + R   E+         P   + +   FR E+   GR R+F Q  V++
Sbjct: 62  RHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQAGRQREFHQIGVES 121

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEKIGLHGDDKLN 191
            GSS   AD +  MM  D L  +G+K    HI        RK     L        D+L+
Sbjct: 122 FGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGDEQVRKGYHDALVNYFTPVKDELS 181

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E        D   +     +++L  +   D                  +  FL+ + + +
Sbjct: 182 E--------DSQRRLRDNPLRILDSKDDRDKKF---------LPDAPKIRDFLNDNSKAN 224

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
              + +++          ++L                       VRGL+YYTG ++E ++
Sbjct: 225 FESILKMLDQLGIDYVIDDDL-----------------------VRGLDYYTGVIFEFMV 261

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               + E         + GGGRYD LV  F G   PA GF IG  RL++ L+        
Sbjct: 262 EDKSLWESATT-----ILGGGRYDHLVEEFNGPETPAVGFGIGEERLMLVLEKQN---PE 313

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           + +   +     +    +  K     + LR  G  A+  + + K    Q K ADR     
Sbjct: 314 LFKNEGIDFFITNIGEGTAQKAIEIARSLRKQGFEADFDV-NQKKLKGQFKKADREGAKY 372

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            I  G  E + G+L IK LA GK +   +++ 
Sbjct: 373 VITLGEKELANGVLNIKRLADGKTIDLSLEDI 404


>gi|332969950|gb|EGK08950.1| histidine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 430

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 106/489 (21%), Positives = 181/489 (37%), Gaps = 74/489 (15%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               + I+     +G+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAYWQAFENQIQKWTRKFGYSQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +    ++LR + TA   R V E+      P + + +G +FR E
Sbjct: 64  GEETDVIGKEMYTFSDSNDTLSLTLRPEGTASCLRAVVEHNLLHDAPRKLWYMGAMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR+RQF Q  ++ +G +    DAE+  M AD    +GI            + L   
Sbjct: 124 RPQKGRYRQFHQVGIEALGFADADIDAEIIAMCADLWRELGI-----------LEHLTLE 172

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  +G   +   +   +V       DK   +  K+ L +                     
Sbjct: 173 LNSLGNREERAAHRAALVEYFSQYTDKLSDEE-KVRLEKNPLRLLDTKNPDLQEICNNAP 231

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +V FL  D +K    +  L+ G                          +   +  +VRG
Sbjct: 232 RLVDFLGEDSQKHYQTVKSLLDGL-----------------------GIQYVENPRLVRG 268

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   V+E            K     +V GGGRYDGL+    G+   + GF++GI RL
Sbjct: 269 LDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAASIGFAMGIERL 320

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ ++   S   +        +  M     +        Q LR  G     F GS+K   
Sbjct: 321 LLLVRDYGSLQVS----DAPDVFVMQQGDGATLAAMKLAQNLRENGFNVAQFSGSTK-LK 375

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           NQ K AD+      +I    E +   + IKDL                      QIT+P 
Sbjct: 376 NQFKRADQSGARFGLIIAESEAAENTVTIKDLR-----------------GENGQITVPA 418

Query: 479 SELVSTVKK 487
           ++++S +K+
Sbjct: 419 AQMISQIKE 427


>gi|167387925|ref|XP_001738366.1| histidyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165898460|gb|EDR25308.1| histidyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 506

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 128/481 (26%), Positives = 216/481 (44%), Gaps = 38/481 (7%)

Query: 2   GKKTKLRA--ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            KK +L+   + P+G  D   K +  R   + +I   ++ +G   I+TP+ E  D L   
Sbjct: 27  TKKEQLKFLVKTPKGTRDYFPKTMNARETAIQTITRCFKRHGAVTIDTPVFELKDILTSK 86

Query: 60  LPDEDRPNKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
             +E    K ++ L D   G+ +S+RYDLT P ARY+A N    V   + Y+IG V+R +
Sbjct: 87  YGEEG--GKLIYDLADQGEGEKLSMRYDLTVPFARYLATNG---VKKIKRYQIGKVYRRD 141

Query: 119 KH--GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           +     GR R+F QCD D          DAE+  ++ + L  +  +   + I IN+RK+L
Sbjct: 142 QPYMTRGRQREFCQCDFDIAGEYDPMIPDAEIVSILNEVLTDL--EIGTFRIKINHRKLL 199

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           D I    G+  +    +   +  A+DKLDK   + V+  + E              L   
Sbjct: 200 DAIFVLAGVPRE----KFPAIFSAVDKLDKVSWEDVEKEMVEV-----------KGLDRA 244

Query: 236 QIDIMVSFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               +  ++ + D  K M++    +K     +   N++ ++ E     G   + ++   +
Sbjct: 245 VAQKVGEYVKMHDKPKVMYQKLVDMKLGETAKDAMNDMKLLIEYCDALGCL-DNVEFDMS 303

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YYTG ++EA++              GS+ GGGRYD LV  F    +P  GFS+G
Sbjct: 304 LVRGLDYYTGVIFEAVMVVGNT-------SVGSIAGGGRYDNLVGIFGANKIPCVGFSVG 356

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + R+++ L+  + S N+        +     D + L     Y   L  AGI AE     +
Sbjct: 357 LERIMIILEE-KLSKNSKLYEAQTEVFVASVDKNRLINRLQYLNRLWEAGIYAETLQRVN 415

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                +L+ AD   C  A+I G  E     + +K+L   K+L+ +          R+   
Sbjct: 416 PKIKQELRDADEIGCRFAVIFGGSELEEKKVVLKNLITQKQLTIDDDQLVPALVYRLTHK 475

Query: 475 T 475
           +
Sbjct: 476 S 476


>gi|149372135|ref|ZP_01891405.1| histidyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149354902|gb|EDM43464.1| histidyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 431

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 133/458 (29%), Positives = 209/458 (45%), Gaps = 52/458 (11%)

Query: 30  LDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR--------------PNKGVFSLQ 74
           +D+I+  + ++GF PIETP  E SD+L GK+  + DR               +  ++S +
Sbjct: 1   MDTIKRSFTHFGFQPIETPSFENSDTLMGKYGEEGDRLIFKILNSGDYLRKVDDTLYSAK 60

Query: 75  DDDG-----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           D           +LRYDLT P ARYV ++ + I FP + ++I PV+R ++   GRFR+F 
Sbjct: 61  DSGKMTPKISEKALRYDLTVPFARYVVQHQNEITFPFKRFQIQPVWRADRPQKGRFREFF 120

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           QCD D VGS +   + E+  +      A+ +K     I +NNRKIL GI E IG      
Sbjct: 121 QCDADVVGSKSLWQEVELVQLYDTVFTALDLKG--VTIKMNNRKILSGIAEVIGAQDK-- 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               +    A+DKLDK G +GVK  + E              +T E I  +    S    
Sbjct: 177 ---LIDFTVALDKLDKIGEEGVKKEMREK------------GITEEAIQKVQPLFSFTGT 221

Query: 250 --KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             +++  L  ++  +  G+KG  EL  I + + + G  S  ++I  T+ RGL YYTG ++
Sbjct: 222 ATENLASLDTMLASSETGQKGIEELRFIVDNISEIGLQSANLEIDVTLARGLNYYTGAIF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E            + V  GS+GGGGRYD L   F  +++   G S G+ R+ + ++ L  
Sbjct: 282 EV--------AAPEGVAMGSIGGGGRYDDLTGIFGMKDMSGVGISFGLDRIYLVIEELGL 333

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +     VL                    LR   I AE++   +K    Q+ YAD+R
Sbjct: 334 FPETVSANTKVLFINFGAKEAL--YAMKSITKLRAKNISAELYPDEAK-MKKQMGYADKR 390

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
                ++ G  E       +K++  G++ S       +
Sbjct: 391 GITYTVLAGDKEMEAEKFTLKNMKTGEQASLNFDELVN 428


>gi|224418081|ref|ZP_03656087.1| histidyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827410|ref|ZP_04870295.1| histidyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510816|gb|EES89475.1| histidyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 433

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 137/453 (30%), Positives = 221/453 (48%), Gaps = 40/453 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      GF D   KE   ++++L SI   +E +GF PIETP LEY++ L K     D  
Sbjct: 3   ITPRTLSGFKDRLPKEAYAKSQMLKSIVTSFEKFGFSPIETPHLEYAEILKKQG--SDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++   D  G+ ++LR+DLT PLAR++++  + +  P + Y IG VFR E+   GR+R
Sbjct: 61  QKEMYHFIDHGGREVALRFDLTLPLARFISQYKNELGLPFKRYCIGNVFRGERAQKGRYR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +G+ +  +DAE+  ++  +L  +G+K  ++ I INNRKI +G+ E +    
Sbjct: 121 EFTQCDFDFIGTQSIGSDAEIIQVIFQSLSDLGLK--NFTIHINNRKIFNGLCESLNAKE 178

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D        +LR IDK+DK G   V   L E  +           LT  QI  ++ F+++
Sbjct: 179 D-----TTEILRIIDKIDKIGQDSVSKELQEKTS-----------LTLTQIQTLLDFIAL 222

Query: 247 DLEKSMHELYELV----KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
             E    +   L+          ++G  EL  + E++       +  +I+ +I RGL YY
Sbjct: 223 KQEGDSLKFLSLLSPYKAYNQTLKEGLEELESLCEIL-APLIPQSFYQINLSIARGLGYY 281

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YE  LG             GSV  GGRYD L   F  + +   G SIG+ RL+  L
Sbjct: 282 TGIIYETTLGDLPT--------LGSVCSGGRYDNLTQNFSNEKMSGVGASIGLDRLLAGL 333

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L   T++      ++        ++L       + LR  GI+ E++    K      K
Sbjct: 334 EELGLITSSTPAKAILIPL------NNLQYAYTTAKSLRELGIKIEVYPEVIK-PQKAFK 386

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
           YA+ +     II G  E++     +K++  G++
Sbjct: 387 YANNKGYEWVIITGESEQATHSASLKNMQNGEQ 419


>gi|331019379|gb|EGH99435.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 419

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 97/471 (20%), Positives = 178/471 (37%), Gaps = 65/471 (13%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++  +      ++  + +NYG+  I  P++E++D   + + +  D   K +++ 
Sbjct: 1   MNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPVVEFTDLFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D +G  ++LR + TA   R V E+  T      + + IGP+FR+E+   GR+RQF Q  
Sbjct: 61  ADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQKGRYRQFHQIG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDGILEKIG 183
           V+         DAE+ +M       +GI+                   R  L   L    
Sbjct: 121 VEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARARYRDALVEFLSAHL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              D+            D   +     +++L  +            A L       +  +
Sbjct: 181 DQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQAVLVD--APKLADY 219

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +       L   +                               I+  +VRGL+YY+
Sbjct: 220 LDDESRIHFDGLKARLDAA-----------------------GIPYVINPKLVRGLDYYS 256

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +          +    G+V  GGRYDGLV +  G+     GF++GI RL++ L+
Sbjct: 257 KTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGVGFAMGIERLVLLLE 308

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +LE     I     V +      ++  +         R   +R ++  G+  +F +Q K 
Sbjct: 309 TLEQVPEEIARQVDVYLCAFGEAAELAALALTEQVRDRLPNLRLQVNAGAG-SFKSQFKK 367

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQ 473
           AD+     A+I G  E +  ++ +K L  +G++ +           + V Q
Sbjct: 368 ADKSGALYALILGEEELAAKIIGVKPLRGQGEQQNIAWDALSEHLASCVVQ 418


>gi|290977254|ref|XP_002671353.1| predicted protein [Naegleria gruberi]
 gi|284084921|gb|EFC38609.1| predicted protein [Naegleria gruberi]
          Length = 489

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 109/468 (23%), Positives = 199/468 (42%), Gaps = 20/468 (4%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   +  E   G  D   +E+R R  +        + +GF+P + P+LE  +   +   +
Sbjct: 35  KGNAIEVEPVAGTRDFLPEEMREREWLFSKFHETSKLFGFEPYDAPILEMEELYKRKGGE 94

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           E    + +++  D     ++LR ++T  LAR + +N  T+ FP + Y I   +R E    
Sbjct: 95  EIV--QQMYNFIDKSELNVALRPEMTPSLARLILKNKKTLKFPLKWYSIPQCWRYETTTR 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+  Q + D  G    T + E+   + +  + V +      I  ++RKI++ ++ K+
Sbjct: 153 GRKREHYQWNCDIWGVQDVTGECELFATIVNFFKLVSLSSEKVTIRFSSRKIIEDLI-KL 211

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
               +   ++       IDK+DK   + VK +L +       D      +       +  
Sbjct: 212 EFGLNLSDDKFKETCIIIDKMDKMEAEDVKKILVDK-VPEISDEVALKIIKLMNFKKLNP 270

Query: 243 FLSIDLEKSMHELYELVKG-TIAGEKGFNELVVISELVRKSGYN-SNRIKISSTIVRGLE 300
                  K++     ++          F E+  I  +V K+GY+  + I+   +IVRGL 
Sbjct: 271 NEDYSGSKALEAFKGMLTNQAFKDSTVFKEVEEIFAMVGKNGYDIEDWIEFDPSIVRGLS 330

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLI 359
           YYTG V+EA      +          ++ GGGRYD ++  +  ++  PA GF  G   ++
Sbjct: 331 YYTGVVFEAFATVGDI--------QRAICGGGRYDKILGTYGAKDQIPACGFGFGDVVIL 382

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L+ L+     I     V    +  D     +      +LR  G  A+++L + K  G 
Sbjct: 383 EILRDLKLIPEYITSQ-QVEDFVIPFDLSLRPQAAKIVSILRKKGRVADLYLKNPKKVGA 441

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLA----KGKELSREIKNN 463
             +YAD+     AI     E + G ++IK L     + KE + +I++ 
Sbjct: 442 CFEYADKIGATRAIFVAPAEWNNGQVKIKMLREEDPEKKEFTVKIEDL 489


>gi|294782755|ref|ZP_06748081.1| histidine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481396|gb|EFG29171.1| histidine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 412

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 101/463 (21%), Positives = 185/463 (39%), Gaps = 57/463 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
              P+G  D   ++      I +  + ++ENYG+   +TP+ E +D   + + +  D   
Sbjct: 4   IRKPKGTKDIIGEDAVKYIYISNVTQEMFENYGYKFAKTPIFEETDLFKRGIGEATDVVE 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +++ +D   + I+LR + TA + R   EN         R Y  G +FR E+   GR R
Sbjct: 64  KEMYTFKDKGDRSITLRPENTASMVRCYLENSIYAKEDVSRFYYNGSMFRYERPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKIGLH 185
           +F Q  V+  G  +   DAE+  M  + L  +GI   +  I     K    I  EK+  H
Sbjct: 124 EFNQIGVEVFGEKSPILDAEVIAMGYNFLTKLGITDLEVKINSVGSKGSRTIYREKLVEH 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               L++        D  D+     ++LL  +   D             +    ++ +L 
Sbjct: 184 FQSHLDDM-----CEDCKDRINRNPLRLLDCKVDGDKDFY---------KSAPSIIDYLF 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D  K   E+ + +                            +     T+VRGL+YY+  
Sbjct: 230 EDERKHYEEVKKYLT-----------------------IFGVKFTEDPTLVRGLDYYSST 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +          K    G+V GGGRYD L+     +++PA GF+ G+ R+++ ++  
Sbjct: 267 VFEIVTN--------KLGSQGTVLGGGRYDNLLKELGDKDIPAFGFAAGVERVMMLVED- 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                         +       D++       + LR    +  +   SSK   + +K AD
Sbjct: 318 -------YPKDVPDVYIAWLGDDTIETAMKIAETLRKNNAKVYVDY-SSKGMKSHMKKAD 369

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +      II G  E ++G++ +KD +  ++   +I+   +  +
Sbjct: 370 KLETKYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIINHIK 412


>gi|297620023|ref|YP_003708128.1| histidyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379000|gb|ADI37155.1| histidyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 417

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 117/459 (25%), Positives = 197/459 (42%), Gaps = 43/459 (9%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P+G  D    E+  R  I   +R +++NY    I TP  E  D L K   DE R   
Sbjct: 2   FQKPKGTRDFLPSEMLKRKFIAQKLREVFDNYNIKEICTPTFESFDLLCKKTGDEIR--S 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F  +D   + + LR +LT+ +ARY    F  +  P + Y +   FR E    GR+R+F
Sbjct: 60  QLFVFKDHGDREMGLRPELTSSVARYFINEFKNVPKPLKFYYLTNCFRYENPQAGRYREF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +GS+  TADAE+  +  + L+ + +K   Y I I +  +L G+ E+  L  D+
Sbjct: 120 WQMGCELIGSNKCTADAEVLNLAIEGLKHINMK---YEINIGHLGVLKGVFEEFNLSDDE 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                  + R IDK D  GL+ V  ++   +  +  +              ++       
Sbjct: 177 ----STQIRRLIDKEDIDGLKEVLNVIESEKGISISNIVFE----------ILDLKG--N 220

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++ +  L E ++      +    L  I E V           I+  I RGL+YYTG V+E
Sbjct: 221 KEIIDILIEKLQKFPKSIEALENLKEILEYVEH------EYIINFGIARGLDYYTGMVFE 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                              V GGGRYD L+  F+G+  PA GF+ G  R+++ ++  E +
Sbjct: 275 IY---------GTKEGAKQVCGGGRYDNLIELFEGEPTPAVGFAYGFDRIMLNIEEPEVN 325

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                    + ITT  +D +   +     + LR      E+ L  ++     L +A+   
Sbjct: 326 E------EVIYITTAGNDKELTKESFKLAKKLRENSKMVELDL-MNRKLNKSLNFANNIK 378

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               II G  +   GM+ IKD+  G+++  +     ++ 
Sbjct: 379 ATKVIIIGKKDLENGMVSIKDMVSGEQIQVKSDELLNYL 417


>gi|317131290|ref|YP_004090604.1| histidyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469269|gb|ADU25873.1| histidyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 429

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 104/475 (21%), Positives = 184/475 (38%), Gaps = 62/475 (13%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           PRG  D    ++     +  + R     +GF+ I  P  EY++   + + D  D   K +
Sbjct: 8   PRGTLDVTPDQVYKWQYVEQTARRTAATFGFEEIRFPTFEYTELFSRGVGDTTDVVQKEM 67

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++ +D  G+ I+LR + TA   R + +N       P + + +   FR E+   GR R+F 
Sbjct: 68  YTFEDRGGRSITLRPEGTASTVRALLQNGLAGGPLPLKLFYLISCFRGERPQAGRLREFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKIGLH 185
           Q   +  G++   AD E+  +    L+A+G+K      +       RK     L+     
Sbjct: 128 QFGAELFGAAGAAADVELIELAGAALKALGVKDLRLELNSIGCPTCRKDYHAALKAYFKA 187

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + +L          D  ++     ++LL  +                ++   ++  +L 
Sbjct: 188 RETEL--------CDDCKNRLERNPMRLLDCK---------VPTCKAIAKDAPVVTDYLC 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D +    ++   +                               ++  IVRGL+YYT  
Sbjct: 231 DDCKAHFEDVKARLTDAGQ-----------------------TFVLNPRIVRGLDYYTRT 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +     +          +V GGGRYDGLVS   G ++P  GF +G+ RL++ ++S 
Sbjct: 268 VFEFVDEAQGL----------TVCGGGRYDGLVSELGGPSLPGLGFGMGLERLLILMESQ 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                     G V I  +   +   +     T     AGI A   L + ++   Q+KYAD
Sbjct: 318 G-CAFPPAPKGLVYIGAIGGPASQKAAALARTLR--AAGIAAGTDL-AGRSVKAQMKYAD 373

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLA-KGKE-LSREIKNNESWREARVAQITIPI 478
           ++    A++ G  E   G   +K L   G   +  E +   +      AQ TI  
Sbjct: 374 KQGFAYAVMLGDAELENGEAALKALRGDGARTVPLEPETFLAAVRDAAAQSTIKE 428


>gi|116329521|ref|YP_799241.1| histidyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116329836|ref|YP_799554.1| histidyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122282389|sp|Q04WC4|SYH_LEPBJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|122282700|sp|Q04X87|SYH_LEPBL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116122265|gb|ABJ80308.1| Histidine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123525|gb|ABJ74796.1| Histidine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 439

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 107/472 (22%), Positives = 191/472 (40%), Gaps = 36/472 (7%)

Query: 1   MGKKTKLRAELP-RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  +       P +G  D   +E+R+RN +   +R    ++G++  + P+LE  D     
Sbjct: 1   MENQKNFLTTAPYKGTRDFYPEEMRLRNWMFSIMRETVLSFGYEEYDGPILESFDLYKAK 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             +E    + ++   D   + +++R ++T  LAR VA N   +  P R + I  ++R E+
Sbjct: 61  SGEE-IVERQLYDFIDKGERRVAIRPEMTPTLARMVAGNLRNLPRPVRWFSIPNLWRYEQ 119

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            G GR R+  Q +VD  G     A+ E+ +M    L+  G     Y I +++RK+LD  L
Sbjct: 120 PGKGRLREHWQLNVDLFGVDTHRAELEILLMADSILKKFGAPTGSYQIKVSHRKLLDSFL 179

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +      D +++    +L    K+     +               +     N  +EQ  +
Sbjct: 180 KNSLKLSDHQVHGVSKLLDKKSKISPETFE--------------AEIKPLLNNFNEQFSL 225

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + ++L+ +L        E V      +      +              ++    +I+RG 
Sbjct: 226 IETYLASNL--------ETVSTIPGIDPDSIHFIRNLFQELGELGIDKQLVFDPSIIRGF 277

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTGC++E             P    S+ GGGRYD L+  F  + +   GF +G   L 
Sbjct: 278 DYYTGCIFEVFDT--------NPENRRSLYGGGRYDNLIGLFSKEQLSGIGFGLGDVTLK 329

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L++     +  +E    L      D          ++ LR  GI  E  L S+K  G 
Sbjct: 330 SFLENHNLIPDLSREKTLFLPI---MDESIFVDTFKLSKELRENGILTETMLDSAK-IGK 385

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           Q++ A+++     +  G  E     +QIKDL  G++ S   K      +   
Sbjct: 386 QIQVAEKKGYRYVLFLGESEIRTETVQIKDLVSGEQKSLPRKGLSDILKKDF 437


>gi|33635755|emb|CAE22080.1| Histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 426

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 90/442 (20%), Positives = 167/442 (37%), Gaps = 53/442 (11%)

Query: 17  DCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQD 75
           D   ++ R    +    R+ +   G   I TPLLE ++   + + +  D   K +++  D
Sbjct: 2   DLLPEQTRCWQAVESVARDHFRRAGLQEIRTPLLEVTELFARGIGEATDVVGKEMYTFVD 61

Query: 76  DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
              +  +LR + TA + R   ++      P R +  GP+FR E+   GR RQF Q  V+ 
Sbjct: 62  RGDRSCTLRPEGTASVVRAALQHGLLSQGPQRFWYGGPMFRYERPQAGRQRQFYQIGVEY 121

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLHGDDKLNERL 194
           +G  +  +DAE+  +    L  +G++     I      +      E++    + +  E  
Sbjct: 122 LGVGSPRSDAEVIALAWALLVDLGVQGLVLEINSLGTLQDRQKYREELVAWLEARSEELD 181

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                 D   +     +++L  +                 +    +   LS++ +    E
Sbjct: 182 -----DDSRKRLYTNPLRILDSKHPAIKE---------LLQDAPTLFEALSVESKARFEE 227

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   ++                             +++  +VRGL+YY    +E      
Sbjct: 228 VQVDLEAL-----------------------QIPFQLNPRLVRGLDYYGHTAFEIT---- 260

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK- 373
                 +     +V GGGRYDGLV +  G   PA G++ G+ RL++ L++  S   +   
Sbjct: 261 ----SDQLGAQATVCGGGRYDGLVEQLGGAPTPAFGWAFGMERLMLLLEAAASINPSGSA 316

Query: 374 ----EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                     +  ++    +     +    LR AG+  E+   S   F  Q K A R   
Sbjct: 317 ARLRASTRPDLYVVNRGEQAERVALVIAHQLRAAGLVVELD-SSGAAFNKQFKRAGRSRA 375

Query: 430 PLAIIQGTGERSRGMLQIKDLA 451
             A++ G  E  RG  ++K L 
Sbjct: 376 TWALVIGDDEAERGEGRLKYLQ 397


>gi|289626152|ref|ZP_06459106.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289649058|ref|ZP_06480401.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 419

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 96/473 (20%), Positives = 180/473 (38%), Gaps = 69/473 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++  +      ++  + +NYG+  I  P++E+++   + + +  D   K +++ 
Sbjct: 1   MNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTELFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D +G  ++LR + TA   R V E+  T      + + IGP+FR+E+   GR+RQF Q  
Sbjct: 61  ADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQKGRYRQFHQIG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDGILEKIG 183
           V+         DAE+ +M       +GI+                   R  L   L    
Sbjct: 121 VEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARARYRDALVEFLSARL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              D+            D   +     +++L  +            A L       +  +
Sbjct: 181 DQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQAVLVD--APKLADY 219

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +       L   +                               I+  +VRGL+YY+
Sbjct: 220 LDDESRVHFEGLKARLDAA-----------------------GIPYVINPKLVRGLDYYS 256

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +          +    G+V  GGRYDGLV +  G+     GF++GI RL++ L+
Sbjct: 257 KTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTTGVGFAMGIERLVLLLE 308

Query: 364 SLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +L      I     V +       +  +L+  +     L +  +R ++  G+  +F +Q 
Sbjct: 309 TLGQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDQLPS--LRLQVNAGAG-SFKSQF 365

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQ 473
           K AD+     A+I G  E +  ++ +K L  +G++ +           + V Q
Sbjct: 366 KKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEHLASCVVQ 418


>gi|20094974|ref|NP_614821.1| histidyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|32130124|sp|Q8TV61|SYH_METKA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|19888228|gb|AAM02751.1| Histidyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 421

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 108/460 (23%), Positives = 198/460 (43%), Gaps = 51/460 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P+G  D   +E+R R  +   + +++ +YG++ + TP  E++    +   +E   
Sbjct: 6   MKVERPKGTRDFTPEEMRARRWLERYLLDVFRSYGYEEVLTPTFEHAKLFEEKSGEEIL- 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + ++  +D  G+ ++LR ++TAP+ R+      T   P +   I   FR E+   GR+R
Sbjct: 65  -EEMYVFKDKKGRKLALRPEMTAPVVRFYNAELKTRPHPLKLAYIVNCFRYEQPQRGRWR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+  GS    AD E+  +     + + +    + + + +  IL G+LE+ G+  
Sbjct: 124 EFWQAGVEVFGSDRPEADVEVIELTYRIFDGI-LPSGAFEVRVGHLGILRGLLEEYGIGE 182

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D +                     V  L+ +G  D          L +E  +  ++ ++ 
Sbjct: 183 DVQ-------------------NKVAHLVDKGELDEVKTL-----LPAEPAEKALAVVTA 218

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             E  +    E V G    E+    L+ IS+ +R++G +     +  ++ RGL+YYTG V
Sbjct: 219 RSESEVE---EAVSGKERAERALENLMEISDALREAGVDHE---LDFSVARGLDYYTGMV 272

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E  +       +            GRYD LV    G +VPA G +IG  RL++A +  +
Sbjct: 273 FEIHVPELGGGSQCAGG--------GRYDDLVKELGGPDVPAVGMAIGFDRLLLAAELYD 324

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGNQLKYA 424
              + ++E   +LI  +        K       LR  G  +  E+   S K+    L  A
Sbjct: 325 RIPDGVEETRALLIPLVRSG-----KIWEIAAKLRKLGWVVNVEV---SGKHIRKALSLA 376

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           D      A+I G  E   G + +K+L  G +    +   E
Sbjct: 377 DSLEYDYAVIVGERELKEGYVSVKNLKTGVQEEVPLDQLE 416


>gi|320322920|gb|EFW79010.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329957|gb|EFW85945.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 419

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 96/473 (20%), Positives = 180/473 (38%), Gaps = 69/473 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++  +      ++  + +NYG+  I  P++E+++   + + +  D   K +++ 
Sbjct: 1   MNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTELFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D +G  ++LR + TA   R V E+  T      + + IGP+FR+E+   GR+RQF Q  
Sbjct: 61  ADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQKGRYRQFHQIG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDGILEKIG 183
           V+         DAE+ +M       +GI+                   R  L   L    
Sbjct: 121 VEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARARYRDALVEFLSARL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              D+            D   +     +++L  +            A L       +  +
Sbjct: 181 DQLDE------------DNQRRLKTNPLRVLDTKHPE-------TQAVLVD--APKLADY 219

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +       L   +                               I+  +VRGL+YY+
Sbjct: 220 LDDESRVHFEGLKARLDAA-----------------------GIPYVINPKLVRGLDYYS 256

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +          +    G+V  GGRYDGLV +  G+     GF++GI RL++ L+
Sbjct: 257 KTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTTGVGFAMGIERLVLLLE 308

Query: 364 SLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +L      I     V +       +  +L+  +     L +  +R ++  G+  +F +Q 
Sbjct: 309 TLGQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDQLPS--LRLQVNAGAG-SFKSQF 365

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQ 473
           K AD+     A+I G  E +  ++ +K L  +G++ +           + V Q
Sbjct: 366 KKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEHLASCVVQ 418


>gi|269123830|ref|YP_003306407.1| histidyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315156|gb|ACZ01530.1| histidyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 414

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 99/461 (21%), Positives = 185/461 (40%), Gaps = 54/461 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           ++ E  RG  D  ++E+   N I+++ + I++ YG+  I TP+LE ++   + +  + D 
Sbjct: 1   MKFETLRGMKDMFSQEVEKYNFIVNTAKKIFDKYGYTNIITPILEETELFKRAVGDETDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
            +K +++  D   + I++R + TA + R              + Y  GP++R E    GR
Sbjct: 61  VSKEMYTFMDKGDRSITMRPEGTAGVVRAYLNAGFHKSNPNVKWYYYGPMYRYEAPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F Q  V++ G  +   DAE+  M  + L+ +GI   D ++ +N+   ++  +  I  
Sbjct: 121 YREFHQFGVESFGIRSAFLDAELITMACEFLDNLGIT--DIYVELNSLGSVESRITYI-- 176

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
               K     I   + D   +     +++   +   D             E    +  F 
Sbjct: 177 KELKKYLLNNIDKLSDDSKIRAEKNPLRVFDSKDEGDQK---------VLENAPKLHDFF 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + +    EL   +                          + + +I+ ++VRGL+YY+ 
Sbjct: 228 DEESKIFFEELKYNLDEF-----------------------NIKYEINPSLVRGLDYYSD 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E         +  K     ++ GGGRYD L     G  VPA GF+ GI RL + +  
Sbjct: 265 TVFEI--------KSNKLGAQSTILGGGRYDKLTEILAGIKVPAVGFAAGIERLSMIMDE 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
              S  + K         + +  ++        ++LR   +  E    S K F  Q+K A
Sbjct: 317 SLLSKKDKK-------VFIIYFEETKKYLFDIIKILRKNDVNVEFEY-SIKGFSAQMKKA 368

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           ++      +I G  E + G +  KD   G +    I     
Sbjct: 369 NKVGANYVLILGENEINSGKITFKDFKTGNQEEITITEMIE 409


>gi|116754243|ref|YP_843361.1| histidyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|116665694|gb|ABK14721.1| histidyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 470

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 109/478 (22%), Positives = 175/478 (36%), Gaps = 34/478 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + PRG  D P +E   R  + + + ++ E +G+  + TP  E+ +       +    
Sbjct: 14  MMIQRPRGTRDFPPEEAYRRRAVREKMIDVMERWGYREVATPTFEHLELFTLKSGEG--V 71

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + ++S +D  G+ I+LR +LTAP+ R       +   P R Y     FR E+   GRFR
Sbjct: 72  IEEIYSFKDKGGRDIALRPELTAPVMRMYVSELHSSPKPLRLYYFANCFRYERPQKGRFR 131

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK---------ILDG 177
           +F Q   + +G     ++AE+  M  + L AVGI+ + +   +   +             
Sbjct: 132 EFWQLGCELIGGRRPDSEAEVIAMADEVLRAVGIRGDIHIGYLGLIRSMLKKVPEAHRQS 191

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I+  I     D L E L  + A D L    L  +K      R +          +  E  
Sbjct: 192 IMRLIDKKERDALRELLQSIGAED-LGIIELISLKGKDALERAEELSAALSSIEIPGENA 250

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
               S  +        E            +   +L    E++           I   IVR
Sbjct: 251 SAAQSVAAPGASG--REGARASARAGRSPESEMDLSEFREMLELLDAYDVEATIDFEIVR 308

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GLEYYTG V+E                   + GGG Y+ L S F G    +TGF +G  R
Sbjct: 309 GLEYYTGTVFEIYASG--------LGAQNQICGGGSYE-LASLFGGSETFSTGFGLGFDR 359

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           ++  +  ++                +    D         + LR   I   +     ++ 
Sbjct: 360 IMEVVGEVDRQKPP---------VVLAFTPDVKIDAIRIAKRLR--NIVPVVMDVMGRSL 408

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             QLK A   N    II G  E   G L ++D+ KG +    I+  E        Q T
Sbjct: 409 SAQLKSASAINAEHVIIIGRRELDSGKLVLRDMVKGSQEELSIEEIEEQLRIAFEQTT 466


>gi|156842164|ref|XP_001644451.1| hypothetical protein Kpol_520p14 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115094|gb|EDO16593.1| hypothetical protein Kpol_520p14 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 537

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 133/526 (25%), Positives = 223/526 (42%), Gaps = 69/526 (13%)

Query: 2   GKKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            KK+KL+   + P+G  D    ++ IR  I +++ NI++ +G   I+TP+ E  + L   
Sbjct: 37  SKKSKLQVSLKTPKGTKDWADTDMVIREAIFNTLSNIFKRHGGVTIDTPVFELREILAGK 96

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             ++   +K ++ L+D  G+  SLRYDLT P ARYVA N    +   + Y I  V+R ++
Sbjct: 97  YGED---SKLIYDLKDQGGELCSLRYDLTVPFARYVAMNN---IQNIKRYHIAKVYRRDQ 150

Query: 120 HGPGRFRQFIQCDVDN-VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
               + R       D  +  + E+   +   +        G+  ND+ I +N+RKILDGI
Sbjct: 151 PAMTKGRMREFYQCDFDIAGAYESMVPDAECLSILVEGLTGLGINDFKIKLNHRKILDGI 210

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            +  G+  +D       +  A+DKLDK     VK  + E               + E  +
Sbjct: 211 FQIAGVSDED----VRKISSAVDKLDKSPWDVVKKEITEE-----------KGQSEETAN 255

Query: 239 IMVSFLSIDLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            +  ++ ++         ++   E+V       +G  ++  + +     G +   I    
Sbjct: 256 KIGEYVKLNGSLQEVYDKLNSDPEIV-ANEKATQGLADIATLIKYADAFGIDK-FISFDL 313

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKP--------------VVFGSVGGGGRYDGLVS 339
           ++ RGL+YYTG +YEA+       +                  V  GS+  GGRYD LV+
Sbjct: 314 SLARGLDYYTGLIYEAVTSASAPPKNATELKKKSKEDEDASAYVGVGSIAAGGRYDNLVN 373

Query: 340 RF------KGQNVPATGFSIGISRLIVALKSLESSTNNIKEM-GPVLITTMDHDSD---S 389
            F      K   +P  G S G+ R+   +K   ++   IK     V +       D    
Sbjct: 374 MFAEASGKKSVQIPCVGISFGVERIFSLVKQRAAAAAAIKPTATQVFVMAFGGGKDWTGY 433

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +    T+ L  AGI AE    +  N   Q   AD+  CPLA+I G  E     L++K 
Sbjct: 434 LPERMKVTKQLWNAGIEAEYVYKAKANPRKQFDAADKSGCPLAVILGKEEYLENKLRVKR 493

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           L  G E + +                I  +EL+  +K+ L +  ++
Sbjct: 494 L--GPEFADDDGEL------------IDANELIPIIKEKLSQVHQD 525


>gi|251770967|gb|EES51552.1| histidyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 431

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 96/476 (20%), Positives = 175/476 (36%), Gaps = 51/476 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + PRG  D    E     ++ D +R ++   GF  +  P+ E +    + + +  D 
Sbjct: 1   MKYQAPRGVKDLLPPESGSFRQLEDEVRRLFALSGFQEVRLPIFESAALFTRSIGESTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K ++  +   G+ ++LR + TA L R   E+         R +  GP+FR+E+   GR
Sbjct: 61  VEKEMYLFEGKGGETLALRPEGTASLLRAAIEHRLAEPGRTSRLFYQGPMFRHERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
            RQF Q   + +G +    DA++   ++   +A GI  +      +          +++ 
Sbjct: 121 LRQFHQAGAEILGPNDPDTDADLIATVSRYAQATGIPGSRLLINSMGCENCRPEYRKRLL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            + + +       L     + +     +++L  +          +G     +    +   
Sbjct: 181 SYLEGQ-----KNLLCETCVRRIATNPLRVLDCK---------VEGCQAVLDAAPAITDS 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L          + + +                               +S  +VRGL+YYT
Sbjct: 227 LCPASRDHFERVRQALSE-----------------------GDIPYTLSHRLVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E +                +   GGRY+GLVS   G +VP  G +IGI RL +  +
Sbjct: 264 ETAFEWV--------SDALGAQSTWAAGGRYNGLVSSLGGPDVPGVGLAIGIERLFLLRE 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
              +   + +   PV+I     D+DS    +     LR  GI      GS++        
Sbjct: 316 KAGTLPVSKE--PPVMIALHPLDNDSRPYVRTLLAGLREEGISCVGLFGSNR-LKKAFVS 372

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           A+R       + G  ERS G L IKDL  G + +              A + + I 
Sbjct: 373 AEREGARYIGLAGESERSDGTLTIKDLKTGVQQTLPGHPAHDLARILRAGLQLSID 428


>gi|94496665|ref|ZP_01303241.1| histidyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424025|gb|EAT09050.1| histidyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 419

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 90/468 (19%), Positives = 172/468 (36%), Gaps = 61/468 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKE----IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           M +         RG  D               ++ +   +   YGF  +E P+ E +   
Sbjct: 1   MARID--TPRPVRGTQDMLGGTPDAFQERFAHVVATFDRVRRLYGFQRVEVPVFEATAVF 58

Query: 57  GKFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
            + L +  D  +K +++ +D  G  I+LR + TA ++R           P +    GP+F
Sbjct: 59  ARSLGESTDVVSKEMYTFEDRGGDSITLRPEFTAGISRAYITEGWQQYAPLKVATHGPLF 118

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R E+   GRFRQF Q D + +G+    AD E+ +M    L  + I+     +        
Sbjct: 119 RYERPQKGRFRQFHQLDAEIIGAGEPGADVELLVMGDQLLRELKIEGVTLTLNTLGDAAS 178

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
                   +   +     L    + D +++     +++L  +   D            ++
Sbjct: 179 RDAWRAALIAHFEANRGDL----SEDSVERLAKNPLRILDSKDPRDRP---------IAD 225

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               + ++L+ +      ++   +       +    L                       
Sbjct: 226 SAPDIDAYLTDEARGFFEKVTAGLDAAGVAWERNARL----------------------- 262

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY    +E +          +    G+V GGGRYDGL+    G   PA G++ GI
Sbjct: 263 VRGLDYYRHTAFEFVT--------DRLGAQGTVLGGGRYDGLIENLGGPATPAVGWAAGI 314

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RL + + + E    +        +  +     + ++       LR AGI  +M      
Sbjct: 315 ERLAMLVDAPEVEKPS--------VVLIPMGEAAEARATGIIADLRRAGIACDMGYRG-- 364

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           N   +++ A+      AII G  E ++G   +++L  G++ +  +   
Sbjct: 365 NMKKRMQRANASGADWAIILGDDELAQGEAAVRNLGTGEQQAVALDAL 412


>gi|50308467|ref|XP_454235.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643370|emb|CAG99322.1| KLLA0E06381p [Kluyveromyces lactis]
          Length = 529

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 138/528 (26%), Positives = 231/528 (43%), Gaps = 70/528 (13%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K +   + P+G  D   K++ IR  I   + ++++ +G   ++TP+ E  + L     ++
Sbjct: 29  KLQFTLKTPKGTKDWAEKDMVIREAIFSQLSSLFKRHGGITLDTPVFELREILAGKYGED 88

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--G 121
              +K +++L+D  G+  SLRYDLT P ARYVA N    V   + Y I  V+R ++    
Sbjct: 89  ---SKLIYNLEDQGGELCSLRYDLTVPFARYVAMNN---VQSIKRYHIAKVYRRDQPAMT 142

Query: 122 PGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
            GR R+F QCD D      +   DAE+  ++ + L ++GIK  D+ + +N+RKILDGI +
Sbjct: 143 KGRMREFYQCDFDVAGTYESMVPDAEILSILVEGLTSLGIK--DFKVKMNHRKILDGIFQ 200

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  +D       +  A+DKLDK   + VK            + T     T E  +I+
Sbjct: 201 IAGVKDED----VRKISSAVDKLDKSPWEVVKK-----------EITIEKGQTEETANII 245

Query: 241 VSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++ ++        +    +  +      +G  E+  +   V+  G   + I    ++ 
Sbjct: 246 GEYVKLNGSLETIHDILSKDKAFQANEKAVEGLKEIETLISYVKAFGI-QDYISFDLSLA 304

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKP------------------VVFGSVGGGGRYDGLV 338
           RGL+YYTG +YEA+       +                      V  GS+  GGRYD LV
Sbjct: 305 RGLDYYTGIIYEAVTAASAPPKNASELKEKSKKQKKDDDDASEYVGVGSIAAGGRYDNLV 364

Query: 339 SRF------KGQNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD--- 388
           + F      K  ++P  G S G+ R+   +K   E S N       V +       D   
Sbjct: 365 NMFGEASGKKSTSIPCVGISFGVERIFSLIKQRVEQSNNVRPTATQVFVMAFGGGKDWTG 424

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            L +     +ML   GI AE    S  N   Q   A++  CPLA+I G  E     L++K
Sbjct: 425 YLPERMKVAKMLWENGIEAEYVYKSKANPRKQFDAAEKSGCPLAVILGKEEYLENKLRVK 484

Query: 449 DL------AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
            L        G+    +  +  S  + +++Q+       V  V ++++
Sbjct: 485 RLGPEFANDDGE--LIDAADLISVVKEKLSQVH---ENGVDEVTRLIK 527


>gi|242277623|ref|YP_002989752.1| histidyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511943|sp|C6BVJ9|SYH_DESAD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|242120517|gb|ACS78213.1| histidyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 412

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 96/466 (20%), Positives = 185/466 (39%), Gaps = 61/466 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K++     G AD   ++      +  + R+++ +YG+  +  P+LE ++   + +
Sbjct: 1   MAKIQKIK-----GVADLFPEDSARYAFMEKTARDVFSSYGYGELRVPILEKTELFCRSI 55

Query: 61  P-DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNE 118
             + D   K +++  D  G+ +++R + TA + R   EN         + +  GP+FR E
Sbjct: 56  GEETDVVQKEMYTFPDRKGRSLTMRPEATAGIVRAYVENKIYQPGKVSKFFTFGPMFRYE 115

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR RQF Q D +  G++   ADAE+ +M++  L  +G+++  + +           
Sbjct: 116 RPQAGRMRQFHQIDAEIFGAAEPQADAEVLLMLSSFLSNIGLEKLSFELNSLGCPECR-- 173

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
             K      D L          D   +     +++L  +          K     +E   
Sbjct: 174 -PKYNQALKDFLASLDREQLCDDCQRRMDTNPLRVLDCKS---------KNCKALTENAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   L  +  +    +  L+                            +  ++  +VRG
Sbjct: 224 TLPDHLCGECREHFDTVIALIDEAGL-----------------------QYTLNPRLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISR 357
           L+YY    +E                  +V GGGRYDGLV      + VPA GF+ G+ R
Sbjct: 261 LDYYQRTAFEVT--------SGDIGAQTAVAGGGRYDGLVESLGGPKKVPAIGFACGMER 312

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L + L+         +            D  +     ++ + LR +G++ E+   ++K+ 
Sbjct: 313 LAMLLE--------GEFEPAADFYVALVDERAAKDSLIFGEKLRRSGLKGEVGF-TAKSM 363

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKN 462
             QL++A++ N     I G  E   G + IKD+A+ G++ +     
Sbjct: 364 KAQLRHANKINAQKCFIFGAEEFENGTVTIKDMAEGGEQETVSRDE 409


>gi|160946147|ref|ZP_02093358.1| hypothetical protein PEPMIC_00109 [Parvimonas micra ATCC 33270]
 gi|158447670|gb|EDP24665.1| hypothetical protein PEPMIC_00109 [Parvimonas micra ATCC 33270]
          Length = 433

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 128/459 (27%), Positives = 206/459 (44%), Gaps = 35/459 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++     G  +    E  + + + + I + ++  GF PI+TP+ E ++ L      E   
Sbjct: 4   IKPSNVVGTMELLPNEQILFDNVKNIIEDTFKKRGFLPIDTPVFEKNEILLAKGGGE--T 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +F   D + + ISLR+DLT PLARYVA+ F  + FP R Y IG V+R E++  GR++
Sbjct: 62  TKQIFK-IDSESKDISLRFDLTVPLARYVAQYFSDLNFPFRRYHIGKVYRGERNQKGRYK 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD+D +G+       +  +          I    + I  +N KI++G+ E +G+  
Sbjct: 121 EFYQCDIDVIGNGKLDIKNDAELPYIIYEIFSKIINEKFAINFSNLKIINGLFENLGVDN 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                    +LR IDK++K G + V   L                L    ++ +  F+ I
Sbjct: 181 K------TDMLRIIDKIEKIGFEKVVEELKNT------------GLNDNNLEKITEFIKI 222

Query: 247 DL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
               E+ + +L  L       +KG  EL  +   ++  G   + IKI+ TI RGL+YYTG
Sbjct: 223 SGSNEEIIEKLNSLGIKNALFDKGVEELKEVYNCMKLFGIPEDCIKINLTITRGLDYYTG 282

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            VYE  L        +     GSV  GGRYD L S +  Q +P  G SIG++RL   L  
Sbjct: 283 TVYETFL--------ENYRQLGSVCSGGRYDDLASNYTSQILPGVGISIGLTRLFYQLLD 334

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                         LI  M    +              +G   +++   +K    ++ YA
Sbjct: 335 KNLFKEIKTNSIDALIIPM---ENCYDYAIKLLNKFENSGKIIQIYFEDAK-MKKKISYA 390

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           D+ N P  II G  E++     +KDL  G++ + + +  
Sbjct: 391 DKLNIPYIIIVGEDEKANNTYTVKDLKTGEQSTVDFEGL 429


>gi|268552601|ref|XP_002634283.1| C. briggsae CBR-HRS-1 protein [Caenorhabditis briggsae]
          Length = 500

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 128/466 (27%), Positives = 214/466 (45%), Gaps = 30/466 (6%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLP 61
           K  K   +  +G  D    +  +RN +L ++   +  YG + I+TP+ E  D L GK+  
Sbjct: 53  KPGKFVLKTGKGTRDYGPAQSALRNSVLQNVVETFNKYGAETIDTPVFELRDVLMGKYGE 112

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH- 120
           +     K V+ LQD  G+ +SLRYDLT P ARY+A N    +     Y+I  V+R ++  
Sbjct: 113 EG---GKLVYDLQDQGGELLSLRYDLTVPFARYLAMNK---ITNITRYQIAKVYRRDQPV 166

Query: 121 -GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F QCD D  G          C+ + + L    ++  ++ I +N+R IL+G+ 
Sbjct: 167 MSRGRYREFYQCDFDIAGQYDLMLPEAECLGIVNELLT-KLEIGEFFINLNHRLILEGMF 225

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+   D       +  ++DKLDK     V+  + + +       +K   L   +   
Sbjct: 226 AVSGISPKD----FKTICSSVDKLDKTPWAEVEEEMIKEKFLTKEQTSKLGELVRFRELN 281

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                   LEK        +      +KG  EL V+   +   G  + R + S  + RGL
Sbjct: 282 SNLNNLELLEK--MSALPELGQNEKFKKGAEELKVLIGYLEVDGVTTVRYEPS--LARGL 337

Query: 300 EYYTGCVYEAILG--------FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-NVPATG 350
           +YYTG +YEA+              +   +PV  GSV  GGRYDGLV+ F  +  VP  G
Sbjct: 338 DYYTGAIYEAVAPKALEGTAAEKAEDTAGQPVGVGSVAAGGRYDGLVNMFDSKLKVPCCG 397

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            S GI RL   +++ +    +        +       + + + +   + LR AGI++EM 
Sbjct: 398 VSFGIERLFAIMEARQK---SAVRTTQTEVYVASAQKNMVIERKKLLRTLRAAGIKSEMP 454

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           L ++     Q +YA+ R  PL ++ G  E   G+++++++   +E 
Sbjct: 455 LKANPKLLTQFQYAEERRIPLVVLIGERELQEGIVKLRNVVSREEK 500


>gi|293375175|ref|ZP_06621462.1| histidine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646212|gb|EFF64235.1| histidine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 469

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 100/456 (21%), Positives = 178/456 (39%), Gaps = 48/456 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +    P+G  D   K+      +   IR I   + +  I TP+ E +    +   +  D 
Sbjct: 1   MNFNKPKGTYDVLPKDSARWQNVESLIREICSIFNYKEIRTPMFESTQLYHRSAGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGR 124
            +K  +  +D   + ++LR + TA + R   EN         + + IGP+FR E+   GR
Sbjct: 61  VSKETYDFKDRGDRMMTLRPEGTAGVVRSYIENKMYADQMVQKMFYIGPMFRYERQQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQ IQ   +  GS+  + DAE+  +     + +G               L  I  K+  
Sbjct: 121 YRQHIQFGTEVFGSADPSIDAEVISLAVTLYKVLG---------------LRNIKVKLNS 165

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
            GD +                   +  +  L      +  +      +  E+  + V   
Sbjct: 166 LGDTE-----------------SRENYRAALLAHFEGHKEELCADCQVRLEKNPLRVLDC 208

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +D  K + +    +   +  E+     + + + ++  G      +  +++VRG +YYT 
Sbjct: 209 KVDRNKEIMQSAPQMIDHLT-EEDKAYFMNVQKYLKAMG---IEYEYDASLVRGFDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++E                  ++ GGGRY+ LV+   G  VPA GF +G+ RL++AL++
Sbjct: 265 TIFEIQAEIKGF------GSQNTLCGGGRYNKLVAELGGPTVPAIGFGMGLERLLLALEA 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     +   LIT +  D+       +    LR+ G+  E      KN   Q K A
Sbjct: 319 ENIQVAGEDAVDLFLIT-LGEDAKVFGSRLLL--DLRSRGLACETDY-LGKNLKGQFKQA 374

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           DR +     I G  E   GM+ IK+   G + S  +
Sbjct: 375 DRYHARYTAILGDEELQHGMINIKNNQTGTQESIPV 410


>gi|257487197|ref|ZP_05641238.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 419

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 96/473 (20%), Positives = 181/473 (38%), Gaps = 69/473 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++  +      ++  + +NYG+  I  P++E+++   + + +  D   K +++ 
Sbjct: 1   MNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTELFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D +G  ++LR + TA   R V E+  T      + + IGP+FR+E+   GR+RQF Q  
Sbjct: 61  ADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQKGRYRQFHQIG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDGILEKIG 183
           V+         DAE+ +M       +GI+                   R  L   L    
Sbjct: 121 VEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARARYRDALVEFLSARL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              D+            D   +     +++L  +            A L       +  +
Sbjct: 181 DQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQAVLVD--APKLADY 219

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +       L   +                               I+  +VRGL+YY+
Sbjct: 220 LDDESRVHFEGLKARLDAA-----------------------GIPYVINPKLVRGLDYYS 256

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +          +    G+V  GGRYDGLV +  G+     GF++GI RL++ L+
Sbjct: 257 KTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTTGVGFAMGIERLVLLLE 308

Query: 364 SLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +L      I     V +       +  +L+  +     L +  +R ++  G+  +F +Q 
Sbjct: 309 TLGQVPEEIARQVDVYLCAFGEAAELAALALTEQVRDQLPS--LRLQVNAGAG-SFKSQF 365

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQ 473
           K AD+     A+I G  E ++ ++ +K L  +G++ +           + V Q
Sbjct: 366 KKADKSGALYALILGEEELAKKVIGVKPLRGQGEQQNIAWDALSEHLASCVVQ 418


>gi|224541605|ref|ZP_03682144.1| hypothetical protein CATMIT_00776 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525475|gb|EEF94580.1| hypothetical protein CATMIT_00776 [Catenibacterium mitsuokai DSM
           15897]
          Length = 433

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 102/471 (21%), Positives = 177/471 (37%), Gaps = 52/471 (11%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+  ++   PRG  D   +       +   +R +  NY    + TP+ E+++   + + 
Sbjct: 3   KKEEPMKYNRPRGTVDITPENSEKWIEMEQLLRTVAANYNVKEMRTPIFEHTELFSRAVG 62

Query: 62  D-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNE 118
           D  D   K +++ +D   + ++LR + TA +AR   E+          + Y +GP+FR E
Sbjct: 63  DTTDVVTKEMYTFKDKGDRSLTLRPEGTAGIARAYVEDKMYALPEKLQKVYYMGPMFRYE 122

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR RQF Q  V+ +G  +   D E  +M    +EA+GIK    HI           
Sbjct: 123 RPQNGRQRQFHQFGVEMLGVESPYVDVECMLMAVTIVEALGIKNIKLHINSLGDDESR-- 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
                    D     L  L   D   +F    +++L  +             N       
Sbjct: 181 -TAYREALKDHFRPVLNDL-CEDCQARFEKNPLRILDCK---------VDAKNPIMTSAP 229

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             + +LS   +    ++  L+                               + + +VRG
Sbjct: 230 RTIDYLSEKAKAHFDKVCSLLDDLE-----------------------IEYVVDTNLVRG 266

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY+  V+E I   P +              GGRY+GLV    G   P  GF+ G+ RL
Sbjct: 267 LDYYSHTVFEIISDDPKLGAGSTVGG------GGRYNGLVEELGGPATPGVGFAFGMERL 320

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL   E       E   + +  M    ++         MLR  G   +M   + +   
Sbjct: 321 MLALDDEE------DEENGIDVYVMPLGDEARDLAMQIITMLRANGFTCDMDY-AGRGLK 373

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            Q K +DR    L+II G  E     + I+     ++   ++++  S+ E 
Sbjct: 374 GQFKSSDRFGAHLSIIIGEDEVKGEYVNIRCNHSKEQSEVKLEDILSYIEN 424


>gi|332184775|gb|AEE27029.1| Histidyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 421

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 103/490 (21%), Positives = 180/490 (36%), Gaps = 81/490 (16%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           +  + RGF D    +      +   I+ I + Y +     P++E S+   + + +  D  
Sbjct: 3   KLTIVRGFNDILPLDSYKWQFLESKIKLILDRYNYSETRLPVVEKSELFHRSVGETSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K  +  QD +G  ++LR + TA   R V EN   T     + +  GP+FR E+   GR+
Sbjct: 63  SKETYDFQDRNGDSLTLRPEGTAGCVRMVIENNLATRGQVQKLWYCGPMFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR------NDYHIGINNRKILDGIL 179
           RQF Q  V+  G      D E+  +     + +GI        N     +N ++    +L
Sbjct: 123 RQFYQLGVEAYGFDGIAIDLEILAITWSLFKELGISEYVTLELNSLGSSLNRQEYTQALL 182

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E +  +  +            D + +     +++L  +                      
Sbjct: 183 EYLKPYHAELD---------EDSIKRLDKNPLRILDSKIEKTQK---------ILANAPK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ F+  DL     +  + +       K    L                       VRGL
Sbjct: 225 LIDFIDEDLRLRFKQTRQYLDALGVVYKINQNL-----------------------VRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG V+E            K     ++  GGRYD L+    GQ   A GF+IG+ RL+
Sbjct: 262 DYYTGLVFEWTT--------DKLGSQSAICAGGRYDSLIENLGGQKTAAIGFAIGMERLL 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + L+ L    N         +     DS  L +     + +R     ++ +M L    +F
Sbjct: 314 ILLEDLGKLPNQDNACDVFFVL----DSAQLYQSLAIVENIRQELPQLKIDMDLKFG-SF 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q K AD+    +AII G  E   G   IK                 + +    Q  + 
Sbjct: 369 KSQFKKADKSGAKVAIIIGQDELDNGFAGIK-----------------FLQQNGEQQQVA 411

Query: 478 ISELVSTVKK 487
             EL++ +++
Sbjct: 412 FDELINFLER 421


>gi|190571128|ref|YP_001975486.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018532|ref|ZP_03334340.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|229470704|sp|B3CLR6|SYH_WOLPP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|190357400|emb|CAQ54834.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995483|gb|EEB56123.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 407

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 101/469 (21%), Positives = 171/469 (36%), Gaps = 74/469 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +  RG  D    E      I  +   I   YGF P++TP+ EY++   K L D  D 
Sbjct: 1   MTNQTVRGTKDLLFDEWYKFKHIEQTASRISSLYGFLPVQTPIFEYTEVFTKTLGDSSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +++  D  G+ I+LR + TA + R + E         + + IGP FR E+   GR 
Sbjct: 61  ITKEMYTFIDKGGKSITLRPEFTAAIVRLLIEKKLQAP--IKLFSIGPAFRYERPQKGRQ 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q + +  G     AD E+  +    L   GI +          D       R+ L 
Sbjct: 119 RQFHQINFEVFGIEDPKADIELISLAQHLLTEFGINKNVKLEINSLGDSETITQYREALI 178

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L+K      +            D  ++     +++L  + +TD               
Sbjct: 179 SYLKKFQNDLSE------------DSQNRLIKNPLRILDSKDKTDKE---------IISD 217

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +  + + +      ++   ++                              ++S +V
Sbjct: 218 APKISDYYTKESSYFFDQVLNGLQAL-----------------------GIPYTVNSKLV 254

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +         +     G+V  GGRYD LVS   G++ PA GF+ GI 
Sbjct: 255 RGLDYYCHTVFEFVT--------EDLGAQGAVFAGGRYDNLVSSVGGKHTPAIGFAGGIE 306

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R++  +   E             I  +    ++          LR  G+        S  
Sbjct: 307 RIMELINYAEKKERP--------IYIIPIGGEAEEHALTLASELRRNGLYVIYEY--SGT 356

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              ++K A++ N  + +I G  E S   L+IK++  G+E          
Sbjct: 357 LKTRMKKANQANAKVVLIFGDEELSSKTLKIKNMDTGEEKMIARDKTVE 405


>gi|328854590|gb|EGG03722.1| hypothetical protein MELLADRAFT_37940 [Melampsora larici-populina
           98AG31]
          Length = 580

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 130/525 (24%), Positives = 227/525 (43%), Gaps = 71/525 (13%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           + K + ++P+G  D   K++ +R +I  +I  +++ +G   I+TP+ E  + L     ++
Sbjct: 90  EPKFQLKVPKGTKDHHPKDMILREKIFQTITKVFKLHGAITIDTPVFELKEILSGKYGED 149

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--G 121
              +K ++ LQD  G+  SLRYDLT P AR++A N        + Y I  V+R ++    
Sbjct: 150 ---SKLIYDLQDQGGELCSLRYDLTVPFARFLAMNAKEFN-TIKRYHIAKVYRRDQPAMT 205

Query: 122 PGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
            GR R+F QCD D    +    ADAE+  +  + L+ +  +  ++ I +N+RKILDGI  
Sbjct: 206 KGRMREFYQCDFDFAGTTDPMVADAEVLTIACEVLQEL--EVGEFTIKVNHRKILDGIFS 263

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  D    +   +  A+DKLDK     VK  + E              L     D +
Sbjct: 264 LCGVPDD----KFRSISSAVDKLDKMSWLDVKKEMTEE-----------KGLDPVIADQI 308

Query: 241 VSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ +   + + +            + ++G NE++++ + +   G    +I    ++ R
Sbjct: 309 GEYVKLKGSEELLQKLSEDSKFMNNKSAKEGLNEMILLFKYINVFGITP-KISFDLSLAR 367

Query: 298 GLEYYTGCVYEAILGFPVMN-----------------------------EKQKPVVFGSV 328
           GL+YYTG +YEA++                                     +  +  GS+
Sbjct: 368 GLDYYTGVIYEAVVEGSAPPVPLPAQVQSDPSNQSNSKSISKKPSEEEEIDETTIGVGSI 427

Query: 329 GGGGRYDGLVSRFK--GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
             GGRYD LV  F      +P  G S G+ R+   LKS + +    KE   V +  M   
Sbjct: 428 AAGGRYDNLVGMFSSGKDQIPCVGISFGVERIFTILKSKQENELKSKE---VDVFVMSVG 484

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              L +     + L   GI AE           Q +  ++     AII G  E     L+
Sbjct: 485 DGLLLERMKVCKELWDVGISAEFMYKVKPKPSKQFETVEKDFIRFAIILGPDEIKLNQLR 544

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           IK+   GK+ + E K+ +         I I  +E+++ + + L++
Sbjct: 545 IKE-QLGKDQNIESKDKDG--------ILINRNEMINWLLERLKK 580


>gi|325842216|ref|ZP_08167633.1| histidine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489683|gb|EGC92042.1| histidine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 469

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 100/456 (21%), Positives = 178/456 (39%), Gaps = 48/456 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +    P+G  D   K+      +   IR I   + +  I TP+ E +    +   +  D 
Sbjct: 1   MNFNKPKGTYDVLPKDSARWQNVESLIREICSIFNYKEIRTPMFESTQLYHRSAGETSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGR 124
            +K  +  +D   + ++LR + TA + R   EN         + + IGP+FR E+   GR
Sbjct: 61  VSKETYDFKDRGDRMMTLRPEGTAGVVRSYIENKMYADQMVQKMFYIGPMFRYERQQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQ IQ   +  GS+  + DAE+  +     + +G               L  I  K+  
Sbjct: 121 YRQHIQFGTEVFGSADPSIDAEVISLAVTLYKVLG---------------LRNIKVKLNS 165

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
            GD +                   +  +  L      +  +      +  E+  + V   
Sbjct: 166 LGDTE-----------------SRENYRAALLAHFEGHKEELCADCQVRLEKNPLRVLDC 208

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +D  K + +    +   +  E+     + + + ++  G      +  +++VRG +YYT 
Sbjct: 209 KVDRNKEIMQSAPQMIDHLT-EEDKAYFMNVQKYLKAMG---IEYEYDASLVRGFDYYTH 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++E                  ++ GGGRY+ LV+   G  VPA GF +G+ RL++AL++
Sbjct: 265 TIFEIQAEIEGF------GSQNTLCGGGRYNKLVAELGGPTVPAIGFGMGLERLLLALEA 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     +   LIT +  D+       +    LR+ G+  E      KN   Q K A
Sbjct: 319 ENIQVAGEDAVDLFLIT-LGEDAKVFGSRLLL--DLRSRGLACETDY-LGKNLKGQFKQA 374

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           DR +     I G  E   GM+ IK+   G + S  +
Sbjct: 375 DRYHARYTAILGDEELQHGMINIKNNQTGTQESIPV 410


>gi|88604151|ref|YP_504329.1| histidyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121731779|sp|Q2FTC5|SYH_METHJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|88189613|gb|ABD42610.1| histidyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 408

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 96/454 (21%), Positives = 170/454 (37%), Gaps = 55/454 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D    E+  R  I   +R     YGF  I TP+ E  +       +      
Sbjct: 2   IQKPRGTRDMLPDEMERRREIEARMRARARLYGFREIATPVFEELELFTIRSGEGIIN-- 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ ++LR +LTAP+ R   E   ++  P +       FR E+   GR+RQF
Sbjct: 60  EMYVFEDKGGRSLALRPELTAPVLRMYVEEGRSLNKPVKWCYFADCFRYERPQKGRYRQF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G+ +   DAE+  +  D L   G+        ++  + L             
Sbjct: 120 WQFGAELIGADSAMGDAEVITLGYDLLRTAGVTFVLRIGHLSFMRTLLA----------- 168

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                         L     + ++  L +   + +  + +         D+    + +  
Sbjct: 169 -------------DLADGDKKKIRAFLDKREEEAAITYLRDIGRD----DLCDPLIRLCG 211

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +++ +++ ++            +  +  ++  SG      +I+  I RGL+YYTG V+E
Sbjct: 212 ARTLEDVFAIIGEIPEA----ARVREMFAILDASGIP---YEINPAIARGLDYYTGVVFE 264

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                      +       + GGG Y  L   F G++ P+ GF+IG  R++VAL      
Sbjct: 265 CF--------AEGLGAENQILGGGAY-RLAHLFGGEDTPSAGFAIGFDRVMVALGEASWV 315

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                    V+I T +                R  GI  E  L   ++F  Q+K A +  
Sbjct: 316 PWQ----PQVMIITTNEG---RDYALTIAGQFRMNGIITETDL-MDRSFSAQMKAAGKS- 366

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              A+I G  E   G + +KDL  G +       
Sbjct: 367 ADYAVIIGKDEVETGTITLKDLKAGTQEKITADE 400


>gi|4103152|gb|AAD10241.1| histidyl-tRNA synthetase [Triticum aestivum]
          Length = 479

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 126/470 (26%), Positives = 209/470 (44%), Gaps = 41/470 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            ++P+G  D   +++ IR R    I ++++ +G   ++TP+ E  ++L GK+  D    +
Sbjct: 43  PKIPKGTRDFGREQMAIRERAFSIITSVFKMHGGVALDTPVFELRETLMGKYGED----S 98

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K V+ L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+
Sbjct: 99  KLVYDLADQGGELCSLRYDLTVPFARYVAMNN---ISAIKRYQIAKVYRRDNPSKGRYRE 155

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G           + +   L    +   DY I +N+RK+LDG+LE  G+  +
Sbjct: 156 FYQCDFDIAGVYEPMEPDFEVVKVLTELLD-KLDIGDYEIKLNHRKLLDGMLEICGVPAE 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +   V  +IDKLDK               +   +  +   +++E  + + S +   
Sbjct: 215 ----KFRTVCSSIDKLDKLT-----------FEEVKKELVEEKGVSNETAENIGSLVKTR 259

Query: 248 LEK-----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                    + +               NEL ++ + + K     +RI    ++ RGL+YY
Sbjct: 260 GPPLEVLLELRKEGSKFMENEGSVVALNELEILFKALEK-ANALDRISFDLSLARGLDYY 318

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +YEA+               GS+  GGRYD LV  F  + VPA G S GI R+   +
Sbjct: 319 TGVIYEAVFKGVT--------QVGSIAAGGRYDKLVGMFSNKQVPAVGVSFGIERVFAIM 370

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E   N +       +       D +         L +AGI+AE  L +     N +K
Sbjct: 371 EQQEKEKNQVIRATETEVLVSILGKDLILAA-ELVNELWSAGIKAEFKLTTR--VQNHIK 427

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           YA +   P  ++ G  E   G +++KD+   +E     K+     + R++
Sbjct: 428 YATQTGIPWMVLVGESELRDGKVKLKDIRANQEEEVPRKDFVEVLKQRLS 477


>gi|319956693|ref|YP_004167956.1| histidyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419097|gb|ADV46207.1| histidyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 405

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 102/458 (22%), Positives = 174/458 (37%), Gaps = 57/458 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               RG  D    +      I+++   I  NYGFD IETP+LE +    + + +  D   
Sbjct: 2   INALRGMKDLMFDDAERYTYIVETASRIARNYGFDFIETPILEETRLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC--RTYRIGPVFRNEKHGPGRF 125
           K ++   D  G  + LR + TA + R   +           R +  GP+FR E+   GR 
Sbjct: 62  KEMYQFTDKGGNDVCLRPEGTAGVVRAYIQAKLDRQQGRKDRFFYYGPMFRYERPQKGRL 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V++ G++    D  + MM+++  +A+GI        +     +      +   
Sbjct: 122 RQFHQFGVESFGTAEVEEDFTLIMMLSEIFDALGIGYKVKINSLGCSACMPPYRNTLVGF 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +    E        D   +     +++L  +          +      E    +   L 
Sbjct: 182 LEGIAEEL-----CPDCQRRITTNPIRVLDCKN---------ENCQNLLESAPKLSESLC 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              ++    L +L+  +    +    L                       VRGL+YY+G 
Sbjct: 228 EKCDRDFKRLQKLLDTSGIDYEVDTHL-----------------------VRGLDYYSGT 264

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +          +     ++ GGGRYD LV   +G+  P  GF+IGI R++  +K  
Sbjct: 265 AFEFV--------SDEIGAQSAIAGGGRYDRLVEFLEGKPTPGIGFAIGIERIMELVK-- 314

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 + E           D++SL       Q LR  G +A +   + K     LK AD
Sbjct: 315 ------MPEEERSGWYLGAMDAESLDAILSLGQKLRRKGEKAVVEY-APKGLKAHLKGAD 367

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           R       + G  ER  G + +KDLA  +E +  +++ 
Sbjct: 368 RAGAKYCAVIGENERKDGTVWVKDLASKEEKTVLLESL 405


>gi|190407977|gb|EDV11242.1| histidine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
          Length = 546

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 136/526 (25%), Positives = 230/526 (43%), Gaps = 71/526 (13%)

Query: 3   KKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           KK KL+   + P+G  D    ++ IR  I  ++  +++ +G   I+TP+ E  + L    
Sbjct: 47  KKGKLQVSLKTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKY 106

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K +++L+D  G+  SLRYDLT P ARYVA N    +   + Y I  V+R ++ 
Sbjct: 107 GED---SKLIYNLEDQGGELCSLRYDLTVPFARYVAMNN---IQSIKRYHIAKVYRRDQP 160

Query: 121 --GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
               GR R+F QCD D      +   D+E   ++ + L ++GIK  D+ I +N+RKILDG
Sbjct: 161 AMTKGRMREFYQCDFDVAGTFESMVPDSECLSILVEGLTSLGIK--DFKIKLNHRKILDG 218

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I +  G+  +D       +  A+DKLDK   + VK  + E               + E  
Sbjct: 219 IFQIAGVKDED----VRKISSAVDKLDKSPWEAVKKEMTEE-----------KGQSEETA 263

Query: 238 DIMVSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           D +  ++ ++       ++      +      ++G +++  + +       +S  I    
Sbjct: 264 DKIGEYVKLNGSLKEIHAVLSADANITSNEKAKQGLDDIATLMKYTEAFDIDS-FIYFDL 322

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKP--------------VVFGSVGGGGRYDGLVS 339
           ++ RGL+YYTG +YE +       E                  V  GS+  GGRYD LV+
Sbjct: 323 SLARGLDYYTGLIYEVVTSASAPPENASELKKKAKSAEDVSEFVGVGSIAAGGRYDNLVN 382

Query: 340 RFKG------QNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---S 389
            F          +P  G S G+ R+   +K    SST        V +       D    
Sbjct: 383 MFSEASGKKSTQIPCVGISFGVERIFSLIKQRINSSTTIKPTATQVFVMAFGGGKDWTGY 442

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +    T+ L  AGI AE    +  N   Q   A++  C +A+I G  E   G L++K 
Sbjct: 443 LPERMKVTKQLWDAGIEAEYVYKAKANPRKQFDAAEKAGCHIAVILGKEEYLEGKLRVKR 502

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           L  G+E + +                +  +++V  V++ L +  E+
Sbjct: 503 L--GQEFADDDGEL------------VSAADIVPIVQEKLSQIHED 534


>gi|222480629|ref|YP_002566866.1| histidyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|254782332|sp|B9LRS2|SYH_HALLT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|222453531|gb|ACM57796.1| histidyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 442

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 115/450 (25%), Positives = 193/450 (42%), Gaps = 33/450 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF D    E   R  + D+I +    YGF  I TP LE ++       +E    + +++
Sbjct: 6   KGFRDFYPGEQSARREVTDAIEDAASRYGFREIATPALERTEMYVDKSGEEIV--EELYA 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +D  G+ +S+  +LT  +AR V      +  P +     P +R E+   GRFR+F Q +
Sbjct: 64  FEDKGGRGVSMTPELTPTVARMVVAKGQELSKPIKWMSTRPFWRYEQVQQGRFREFYQTN 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +D  GSSA  ADAE+  + AD L  +G+  +D+   +++R IL G++  +    D    +
Sbjct: 124 IDVFGSSAPEADAEVLAVAADALTDLGLTNDDFEFRVSHRDILGGLVRALAADPD--AVD 181

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               +RA+DK  K        LL +            A L           +S    +++
Sbjct: 182 TKAAIRAVDKRAKVDDGEYLGLLSD------------AGLDRATAQEFDDLISD--VETV 227

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L  + +      +   E +                ++S T  RGL+YYTG V+E    
Sbjct: 228 DDLDAVAEAGGEDVEAAVENLRNVLAAADDFGAGAFCEVSLTTARGLDYYTGVVFECFDS 287

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              ++         SV GGGRYD L+  F GQ  PA G + G + L +  +      +  
Sbjct: 288 TGEVS--------RSVFGGGRYDDLIESFGGQPTPAVGVAPGHAPLSLLCQRAGVWPDEE 339

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGNQLKYADRRNCP 430
                 +++      D+ S+     + LR  G  +  E  + S ++FG QL YAD  N  
Sbjct: 340 LTTDYYVLSV----GDTRSEATALARDLRALGDDVVVEQDV-SGRSFGAQLGYADSINAE 394

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREI 460
             ++ G  +   G   +KD+A G E +  +
Sbjct: 395 TVVVVGERDLENGEYTVKDMASGDETTVPV 424


>gi|6325290|ref|NP_015358.1| Hts1p [Saccharomyces cerevisiae S288c]
 gi|2507433|sp|P07263|SYH_YEAST RecName: Full=Histidyl-tRNA synthetase, mitochondrial; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS; Flags:
           Precursor
 gi|809598|emb|CAA89287.1| Hts1p [Saccharomyces cerevisiae]
 gi|1314107|emb|CAA94983.1| Hts1p [Saccharomyces cerevisiae]
 gi|51012953|gb|AAT92770.1| YPR033C [Saccharomyces cerevisiae]
 gi|207340386|gb|EDZ68752.1| YPR033Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272003|gb|EEU07020.1| Hts1p [Saccharomyces cerevisiae JAY291]
 gi|259150185|emb|CAY86988.1| Hts1p [Saccharomyces cerevisiae EC1118]
 gi|285815567|tpg|DAA11459.1| TPA: Hts1p [Saccharomyces cerevisiae S288c]
          Length = 546

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 136/526 (25%), Positives = 230/526 (43%), Gaps = 71/526 (13%)

Query: 3   KKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           KK KL+   + P+G  D    ++ IR  I  ++  +++ +G   I+TP+ E  + L    
Sbjct: 47  KKGKLQVSLKTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKY 106

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K +++L+D  G+  SLRYDLT P ARYVA N    +   + Y I  V+R ++ 
Sbjct: 107 GED---SKLIYNLEDQGGELCSLRYDLTVPFARYVAMNN---IQSIKRYHIAKVYRRDQP 160

Query: 121 --GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
               GR R+F QCD D      +   D+E   ++ + L ++GIK  D+ I +N+RKILDG
Sbjct: 161 AMTKGRMREFYQCDFDVAGTFESMVPDSECLSILVEGLTSLGIK--DFKIKLNHRKILDG 218

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I +  G+  +D       +  A+DKLDK   + VK  + E               + E  
Sbjct: 219 IFQIAGVKDED----VRKISSAVDKLDKSPWEAVKKEMTEE-----------KGQSEETA 263

Query: 238 DIMVSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           D +  ++ ++       ++      +      ++G +++  + +       +S  I    
Sbjct: 264 DKIGEYVKLNGSLKEIHAVLSADANITSNEKAKQGLDDIATLMKYTEAFDIDS-FISFDL 322

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKP--------------VVFGSVGGGGRYDGLVS 339
           ++ RGL+YYTG +YE +       E                  V  GS+  GGRYD LV+
Sbjct: 323 SLARGLDYYTGLIYEVVTSASAPPENASELKKKAKSAEDASEFVGVGSIAAGGRYDNLVN 382

Query: 340 RFKG------QNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---S 389
            F          +P  G S G+ R+   +K    SST        V +       D    
Sbjct: 383 MFSEASGKKSTQIPCVGISFGVERIFSLIKQRINSSTTIKPTATQVFVMAFGGGKDWTGY 442

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +    T+ L  AGI AE    +  N   Q   A++  C +A+I G  E   G L++K 
Sbjct: 443 LPERMKVTKQLWDAGIEAEYVYKAKANPRKQFDAAEKAGCHIAVILGKEEYLEGKLRVKR 502

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           L  G+E + +                +  +++V  V++ L +  E+
Sbjct: 503 L--GQEFADDDGEL------------VSAADIVPIVQEKLSQIHED 534


>gi|123472251|ref|XP_001319320.1| histidyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
 gi|121902101|gb|EAY07097.1| histidyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 797

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 111/496 (22%), Positives = 208/496 (41%), Gaps = 48/496 (9%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+  + P G  D   K++++R  ++  + +I++ +G   I+TP+ E    L +   +E 
Sbjct: 342 KKVLPKEPVGCIDLLPKQMKVRQEVIQLVTSIFKRHGGVAIDTPVFELRSVLTEKYGEE- 400

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR----TYRIGPVFRNEKH 120
             +K +++L+D  G+ +SLRYDLT P AR+VA +  T +          R  P     + 
Sbjct: 401 --SKLIYNLEDQGGELLSLRYDLTVPFARFVATHGITKIKRYHIAKVYRRDKPAIERGRF 458

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                  F       +  S     + +  ++    +   +   +Y I +++R++L  + +
Sbjct: 459 REFYQCDFDVAGTSGLMISDAEVISIVSELLTAIGKLCRLDNFNYSIRVSHRQLLSAMTK 518

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  +    +   +  ++DKLDK     V           S +      L+    D +
Sbjct: 519 VAGVPDE----KFKTICSSVDKLDKLPWSDV-----------SRELVDVKGLSQAAADKL 563

Query: 241 VSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             F+SI  +  + +  L +         K  +E+ V+   +  +G   N I    ++ RG
Sbjct: 564 GEFVSIQGNPREVLAALRQKQDFVAVAGKVLDEMEVLFNYLEATGCLGN-INFDLSLARG 622

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG +YEA                GS+ GGGRYDGL+  F G+ VPA G S+GI R+
Sbjct: 623 LDYYTGVIYEAGTTS---------GDVGSIAGGGRYDGLIGMFSGRQVPAVGVSLGIERI 673

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++ L+++    +    V I      SD   K           G+  E F     +  
Sbjct: 674 FALIERLKANEEVKESDTEVYI--AGIFSDYTKKRFELASKFWELGVPTEFFPKEKPDIK 731

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            QL  A++    + ++    E  +G ++I+++                 E +  +  +P 
Sbjct: 732 QQLLAAEQLGAKVFVLLAPDELEKGQIKIREMT------------PKGVERQPIERVVPE 779

Query: 479 SELVSTVKKILQENKE 494
           +++V    K+L E K 
Sbjct: 780 ADVVQETIKLLNELKN 795


>gi|30021425|ref|NP_833056.1| histidyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|39932342|sp|Q81B71|SYH1_BACCR RecName: Full=Histidyl-tRNA synthetase 1; AltName:
           Full=Histidine--tRNA ligase 1; Short=HisRS 1
 gi|29896979|gb|AAP10257.1| Histidyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 426

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 130/464 (28%), Positives = 212/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   +  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRELALRYDLTIPFAKVVAMN-PNLRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMAMAFELFRTLNL---EITIQYNNRKLLNGILESINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 280 YEIFLKDRSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 332 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   I +   + 
Sbjct: 383 ANKENIPYVLIIGEDELSTNTVVLRNMKEGSEVKVPISSLSRYL 426


>gi|168334788|ref|ZP_02692914.1| histidyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 416

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 107/464 (23%), Positives = 183/464 (39%), Gaps = 53/464 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +     +G  D    EIR   ++   IR + EN+G   I TP+ E +    + +    D 
Sbjct: 1   MAINALKGTKDIFGTEIRNLQKVESIIREVCENFGIGEIRTPIFELTHLFQRGVGTATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             K ++S  D     I+L+ + TA + R   E N      P + Y I P FR E+   GR
Sbjct: 61  VQKEMYSFVDKGDNNITLKPESTAAVVRAYLERNLGENAQPTKLYYISPTFRYERPEAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
            RQF Q  V+  GSSA  ADAE+  +    L+ + I     Y   +   K  +   +++ 
Sbjct: 121 LRQFHQFGVEVFGSSAAIADAEVIAVANTLLKRLNIANVKLYINSLGGPKCREKYNQQLK 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              + K +    +              +++L  + + ++       A  T + +D     
Sbjct: 181 NFLETKKDNLCSLCNERRIK-----NPLRVL--DCKNEDCQKLFADAPTTLDALDP---- 229

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                                  +       ++ L+ K         ++  IVRGL+YYT
Sbjct: 230 -----------------------ECREHFDTLTTLLTKMNIP---FIVNPRIVRGLDYYT 263

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E IL     +        G++ GGGRYD LV    G+ VPA GF  GI RL++A  
Sbjct: 264 KTVFEFILDSEAYS--------GTICGGGRYDKLVEEIGGKAVPAVGFGTGIERLLIAYL 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +        + +    I        ++ K  +    LR+    A+  L  +++   Q+KY
Sbjct: 316 AEN----PNQNIATRDIFIGYRGDAAMEKAMILVNDLRSQHXNADTDL-XNRSVKAQMKY 370

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++     A I G  E     L +K++   +E   + ++   + 
Sbjct: 371 ANKIGAKYATIIGETELETATLLVKNMKTYQEHQIKFEDLLKFL 414


>gi|94676769|ref|YP_588488.1| histidyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94219919|gb|ABF14078.1| histidyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 430

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 103/476 (21%), Positives = 188/476 (39%), Gaps = 64/476 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    R +  RG  D   KE+     + + ++ +  +YG+  I  P++E +    + +
Sbjct: 1   MVK----RIQSIRGMKDYLPKEMVFLQYLENLLKQVLVSYGYSEIRLPIVEQTLLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D   K ++S +D +G  ++LR + TA   R   E+         R + IGP+FR+E
Sbjct: 57  GEITDVVEKEMYSFEDLNGDHLTLRPEGTAGCVRAGIEHSLFHQKLEQRWWYIGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q   +  G      DAE+ M+ A   + +GI        +    ++ R 
Sbjct: 117 RPQKGRYRQFYQLGAEVFGQHGPDIDAELIMLTARWWKVLGISEYVTLELNSIGSVDTRN 176

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L    +  +  LN                   +++L  +       +    A + 
Sbjct: 177 RYCKALVTFLVQHERYLNNI--------YRRSIYTNPMRILDTKNI--QIQELLNDAPVI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           +E +D                           +        I +L+  +G      KI++
Sbjct: 227 AEYLD---------------------------DNAHKHFSSICKLLDLTG---INYKINT 256

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E                 G++  GGRYD LV +  G+  PA G +I
Sbjct: 257 RLVRGLDYYNYTVFEWTTK--------HLGSQGTICAGGRYDLLVEQLGGKATPAIGAAI 308

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFL 411
           G+ RL++ ++ L+   +      P+ I  +     + S+  +  + +  A   +R     
Sbjct: 309 GLDRLVLLVQRLK--PSLSLITLPIDIYIVAVGDATQSRAMLLAEKIHDAIPSLRIVTNY 366

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           G   NF  Q   A++ +  L +I G  E     + IKDL+ GK+ +       ++ 
Sbjct: 367 GGG-NFKKQFSRANKYSASLTLIIGENEIVTQQVTIKDLSTGKQKTLAQNEIIAYL 421


>gi|298243503|ref|ZP_06967310.1| histidyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297556557|gb|EFH90421.1| histidyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 438

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 106/478 (22%), Positives = 185/478 (38%), Gaps = 63/478 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    +GF D    E      +    + I E +G+  IETPLLE +    +   +  D  
Sbjct: 4   QFRALQGFRDVLPDEQPYWQYVEMVAQEIAELFGYRRIETPLLEETSLFRRTSGESSDIV 63

Query: 67  NKGVFSLQDDDGQW-----ISLRYDLTAPLARYVAENFDT-IVFPCRTYR-IGPVFRNEK 119
           +K ++S  D   +      +SLR + TA + R   E+  + +  P + Y    P+FR ++
Sbjct: 64  SKEMYSFDDRADKEGRSQNLSLRPEGTAGVVRAYLEHGMSRLPQPVKLYYLSEPMFRRDR 123

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGI 178
              GR+R+  Q   + +G +    DAEM  ++      +G+K+ +     I + +     
Sbjct: 124 PQAGRYREHHQFGCEALGENDPVLDAEMIALLYQFYTRLGLKQINVQVNSIGDPEGRPQY 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           +EK+      +    L+     D   +F    ++LL  +   D +               
Sbjct: 184 IEKL-----REYYRPLLDTCCADCKVRFEKNPLRLLDCKEPQDQAKIA---------NAP 229

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             +  LS   ++    L   ++                             +I+  +VRG
Sbjct: 230 KTIDHLSESAQQHFAALRRYLEAY-----------------------GVPYEINPLLVRG 266

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY+  V+E I  F              + GGGRYDGL     G +VP  GF  GI R 
Sbjct: 267 LDYYSHTVFEFISEFDSKLS---------INGGGRYDGLAELLGGAHVPGIGFGAGIERT 317

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I+ +K         ++   V +   D   +        T  LR AG+R EM  G  ++  
Sbjct: 318 ILEMKRQGIEP-PAEKKAQVFVVYFDRTEELKDAAVHVTARLRKAGLRTEMSYG-DRSRK 375

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA------KGKELSREIKNNESWREAR 470
            Q+K A+      AI+    E + G++ IKD+         K+    +   E++ + R
Sbjct: 376 AQMKQANNSQAEYAILIIADELANGVITIKDMRAEGEDIDSKQTQVRLDELEAYFQQR 433


>gi|124485242|ref|YP_001029858.1| histidyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|166228580|sp|A2SQI5|SYH_METLZ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|124362783|gb|ABN06591.1| histidyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 410

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 96/461 (20%), Positives = 168/461 (36%), Gaps = 55/461 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D    E+  R  +   +R +   +G+  I TP+ E  +       +      
Sbjct: 2   IQKPRGTRDFLPAEMAQRRFVEQKMRAVAATFGYGEIVTPMFEELELFTIKSGEGIIN-- 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++ +D  G+ I+LR ++TA + R           P R +     FR E+   GR+RQF
Sbjct: 60  EMYAFEDKGGRKITLRPEITAAVLRAYVNEAQMAPKPLRWFYFAECFRYERPQKGRYRQF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G+ +  ADAE+  +  + L   G++       +   K L   L  +      
Sbjct: 120 WQFGSELIGADSAAADAEVISLAYELLRCTGVRFVMKVGHLAPMKHL---LSGLDAPSQK 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           ++   L                              D       + +  D+      +  
Sbjct: 177 QVMAALDK-------------------------RDMDLLGTTLASLDSSDLFEPLKGLVT 211

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            K++ E++ +             +      +          + +  I RGL+YYTG V+E
Sbjct: 212 AKTLPEIFAVTGDIPE----KARIEETFGYLEAQNIP---FEQNFGIARGLDYYTGMVFE 264

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                              + GGG Y  L   F G++VP+ GF IG  R++V+L  +   
Sbjct: 265 GF--------ADNLGAENQILGGGVY-RLAHLFGGKDVPSCGFGIGFDRVLVSLGEI--- 312

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                    + +  +    ++          LR+AGI A M L   + FG QL  A +  
Sbjct: 313 -----TPQTIPVVAVICTPETRIPAYNAASALRSAGITAVMDL-LDRGFGAQLSSALKSG 366

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              A++ G  E + GM+ +KDLA   +    I N       
Sbjct: 367 ASFAVVIGEKEAAAGMITLKDLATAVQTEMSIDNAIEVIHG 407


>gi|256391560|ref|YP_003113124.1| histidyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256357786|gb|ACU71283.1| histidyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 420

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 91/473 (19%), Positives = 175/473 (36%), Gaps = 67/473 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +   G  D    +      + +++       G+D IETP  E +    + + +  D  
Sbjct: 3   KFQNAPGTFDLLPPDSAAFLGVREAMTAPLRAAGYDYIETPTFESTALFKRGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S     G  ++LR + TA + R   + N      P + +  G  +R EK   GR+
Sbjct: 63  TKEMYSFTTRGGDDVTLRPEGTASVLRAALQANLIRGSLPVKLWYSGSFYRYEKQQRGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILDG 177
           R F Q   + +G+     DAE+ ++  D    +G+           D       R+ L  
Sbjct: 123 RHFSQVGAEALGAEDPALDAELLIIGDDIYRGLGLTEYSLLLNSLGDQKCRPVYREKLQE 182

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            L  + L  + +    +  LR +D       + V+  L                     +
Sbjct: 183 FLRGLDLDEETRKRAEINPLRVLDDK----REAVQRQLT-------------------GV 219

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
            ++   L  +      E+  L+                            +      +VR
Sbjct: 220 PLISDNLCEECRAYHEEVRRLLTAA-----------------------GVKFLDDPKLVR 256

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYT   +E +                ++G GGRYDGL     G ++P+ G+++G+ R
Sbjct: 257 GLDYYTRTTFEYV-------HSGITGSPTAIGAGGRYDGLSEELGGPSLPSVGWALGVDR 309

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
            ++AL +       +     + +  +     +          LR +G+ A+   GS K  
Sbjct: 310 TVLALHAEGR---EVAAGDQLDVFAVPLGDQAREVLFELVTTLRRSGVAADFGYGS-KGI 365

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              +K ADR     A++ G  + +  ++QIK+LA G++ S    +  +  + +
Sbjct: 366 KAAMKAADRSGARYALVLGERDIAENIIQIKELATGEQESVSFTDIVTTIQEK 418


>gi|229815949|ref|ZP_04446272.1| hypothetical protein COLINT_03004 [Collinsella intestinalis DSM
           13280]
 gi|229808502|gb|EEP44281.1| hypothetical protein COLINT_03004 [Collinsella intestinalis DSM
           13280]
          Length = 436

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 97/481 (20%), Positives = 180/481 (37%), Gaps = 72/481 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           ++A+   G  D   +++R   ++ +    ++  +GF+PIETP +E  D     +    D 
Sbjct: 1   MQAQRAEGTKDLIGRDMRAWQKMQEVAAEVFGPFGFEPIETPAIEQLDVFVHGIGQSTDV 60

Query: 66  PNKGVFSL-------------QD---DDGQWISLRYDLTAPLARYVAENFD--TIVFPCR 107
             K +F +              D      Q ++LR + TA + R V EN        P +
Sbjct: 61  VRKEMFRVFSGANFERVLAEGTDAKLKAKQRLALRPEGTAGVVRAVVENNLVPQGSAPFK 120

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH- 166
            +    +FR E+   GR RQF Q  ++ +G+    ADAE  +M+    E +G   +    
Sbjct: 121 AWYAEAMFRGERPQKGRLRQFHQVGIEWLGAPDPAADAECIIMLMRFYERLGFDLSQLRL 180

Query: 167 --IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
               + +        E +     D  +E     R     ++  L  ++    + +  +  
Sbjct: 181 LINSMGDPACRPAYREAVRQFILDHEDEMCDECR-----ERAELNPLRAF--DCKNPHCH 233

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
           +  +GA L  +        L  +  +   ++ + +  +                      
Sbjct: 234 EIMQGAPLMPDS-------LCDECREHYAKVKQYLDASGIA------------------- 267

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
                    T+VRGL+YYT  V+E       +               GRYDGLV    G+
Sbjct: 268 ----YVEDPTLVRGLDYYTRTVFEVEAPGAGVGSIGGG---------GRYDGLVELEGGK 314

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             P  GF++G  R ++AL++       +       +   +  +D   +       LR  G
Sbjct: 315 PTPGVGFAVGFERAVLALEAFGK---EMDCDADRCVFVANAGADLRDEVFALALELRGRG 371

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           +R E      K+   Q K AD+ N    +I G  E + G ++++++A  +E   E  +  
Sbjct: 372 VRTECDY-QGKSLKAQFKLADKLNASHIVIIGGDELAAGKVKLRNMATHEESLIERASAA 430

Query: 465 S 465
            
Sbjct: 431 E 431


>gi|146415222|ref|XP_001483581.1| hypothetical protein PGUG_04310 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 544

 Score =  223 bits (567), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 126/515 (24%), Positives = 217/515 (42%), Gaps = 65/515 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P+G  D   K++  R  I +S+  +++ +G   I+TP+ E  + L     ++   +K
Sbjct: 53  LKTPKGTKDWADKDMIFREAIFNSLSTLFQKHGGVTIDTPVFELREILTGKYGED---SK 109

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++L+D  G+  SLRYDLT P AR+VA N  + +                   GR R+F
Sbjct: 110 LIYNLEDQGGELTSLRYDLTVPFARFVASNSISSIKRYHIA-KVYRRDQPAMTKGRMREF 168

Query: 129 IQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
            QCD D  G         E+  ++ + L  +GI+  D+ + +N+RKILDGI +  G+  +
Sbjct: 169 YQCDFDIAGQYDSMIPDSEILQLLCEGLTGLGIR--DFKVKLNHRKILDGIFQACGVQDE 226

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D       V  A+DKLDK   Q VK  + +             N   E  D +  F+  +
Sbjct: 227 D----VRKVSSAVDKLDKLPWQAVKDEMVKE-----------KNQPEEVADRIGEFVKHN 271

Query: 248 LEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                   +    EL+    + ++G  ++  +++ +     +S  I    ++ RGL+YYT
Sbjct: 272 GTVREVLDILRNDELLTANKSAQEGIADMETLADYLDAFEISS-FISFDLSLARGLDYYT 330

Query: 304 GCVYEAILGF------------------PVMNEKQKPVVFGSVGGGGRYDGLVSRFKG-Q 344
           G +YEA+                       + +  + V  GS+  GGRYD LV  F   +
Sbjct: 331 GLIYEAVTAASAPPTDAEKLKQKAQKDKKEVEDASEYVGVGSIAAGGRYDNLVGMFSNGK 390

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-----SDSLSKYQMYTQM 399
           ++P  G S G+ RL   +K+      N           M        +  L +     Q 
Sbjct: 391 SIPCVGISFGVERLFSIIKARAQKQLNEVSASKTQAFVMAFGGGEGWNGYLKERMAIAQR 450

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L  AGI  E    +  N   Q   A++    + +I G  E   G L++K L +G+     
Sbjct: 451 LWAAGINTEYLYKAKANIRKQFDAAEKSGAQIGVILGKEEYLEGKLRVKVLGQGE----- 505

Query: 460 IKNNESWREARVAQITIPISELVSTVKKILQENKE 494
                           + + ++V  V+K ++E+K+
Sbjct: 506 ---------DSDQGELVDVKDIVEVVQKKIEESKK 531


>gi|104162038|emb|CAJ75746.1| histidyl-tRNA synthetase [uncultured Thermotogales bacterium]
          Length = 424

 Score =  223 bits (567), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 111/473 (23%), Positives = 190/473 (40%), Gaps = 54/473 (11%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           K+     +G  D   ++I   +   + IRNI   Y F  I TP+ E ++   + + +  D
Sbjct: 3   KVMISRIKGTQDIAFEDIDYWHFAEEIIRNISHKYAFTEIRTPIFEATELFKRSVGESTD 62

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGPG 123
              K +++ +D  G+ I+LR + TA +AR   EN F  +  P + +  GP+FR EK   G
Sbjct: 63  VVQKEMYTFEDKGGRSITLRPEGTASVARAFIENSFINLGSPVKLFYSGPMFRYEKPQAG 122

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKI 182
           R RQF Q   + +GS +  AD E+  M    L+ + I     +   I      +     +
Sbjct: 123 RLRQFHQFGAEILGSESPLADFEIIEMAYSFLKELKINNAKLFINSIGCPACREDYKTAL 182

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             +  DKL          D   ++    ++LL          D      L  +    ++ 
Sbjct: 183 KEYYSDKLAGM-----CPDCQRRYETNVLRLL----------DCKIDKGLV-QGAPGILD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  D      EL   ++                             ++   +VRGL+YY
Sbjct: 227 YLDSDCRSHFEELQWYLE-----------------------RAGIDYEVDQFLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   +E                   + GGGRYDGLV    G++ PA GF+IG+ R+++ L
Sbjct: 264 TRTAFEI--------RSSSLGSQDQLVGGGRYDGLVEYIGGKSCPAVGFAIGLERIVMLL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           KS      N  E   V I T   +         Y + LR  G+   + +   +N  N++K
Sbjct: 316 KSENVR-INGPETSEVAILTFGREESVRG--FDYAKRLRKMGVSTFVDVME-RNMRNKMK 371

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +A R    ++++ G  E  R ++ IK +  G +   +      +   ++  I+
Sbjct: 372 HASRIGAKISLLIGKEEIERDIVTIKVMNDGSQFQVDSDYMADYVVDKLRDIS 424


>gi|190347861|gb|EDK40212.2| hypothetical protein PGUG_04310 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 544

 Score =  223 bits (567), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 126/515 (24%), Positives = 217/515 (42%), Gaps = 65/515 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P+G  D   K++  R  I +S+  +++ +G   I+TP+ E  + L     ++   +K
Sbjct: 53  LKTPKGTKDWADKDMIFREAIFNSLSTLFQKHGGVTIDTPVFELREILTGKYGED---SK 109

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++L+D  G+  SLRYDLT P AR+VA N  + +                   GR R+F
Sbjct: 110 LIYNLEDQGGELTSLRYDLTVPFARFVASNSISSIKRYHIA-KVYRRDQPAMTKGRMREF 168

Query: 129 IQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
            QCD D  G         E+  ++ + L  +GI+  D+ + +N+RKILDGI +  G+  +
Sbjct: 169 YQCDFDIAGQYDSMIPDSEILQLLCEGLTGLGIR--DFKVKLNHRKILDGIFQACGVQDE 226

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D       V  A+DKLDK   Q VK  + +             N   E  D +  F+  +
Sbjct: 227 D----VRKVSSAVDKLDKLPWQAVKDEMVKE-----------KNQPEEVADRIGEFVKHN 271

Query: 248 LEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                   +    EL+    + ++G  ++  +++ +     +S  I    ++ RGL+YYT
Sbjct: 272 GTVREVLDILRNDELLTANKSAQEGIADMETLADYLDAFEISS-FISFDLSLARGLDYYT 330

Query: 304 GCVYEAILGF------------------PVMNEKQKPVVFGSVGGGGRYDGLVSRFKG-Q 344
           G +YEA+                       + +  + V  GS+  GGRYD LV  F   +
Sbjct: 331 GLIYEAVTAASAPPTDAEKLKQKAQKDKKEVEDASEYVGVGSIAAGGRYDNLVGMFSNGK 390

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-----SDSLSKYQMYTQM 399
           ++P  G S G+ RL   +K+      N           M        +  L +     Q 
Sbjct: 391 SIPCVGISFGVERLFSIIKARAQKQLNEVSASKTQAFVMAFGGGEGWNGYLKERMAIAQR 450

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L  AGI  E    +  N   Q   A++    + +I G  E   G L++K L +G+     
Sbjct: 451 LWAAGINTEYLYKAKANIRKQFDAAEKSGAQIGVILGKEEYLEGKLRVKVLGQGE----- 505

Query: 460 IKNNESWREARVAQITIPISELVSTVKKILQENKE 494
                           + + ++V  V+K ++E+K+
Sbjct: 506 ---------DSDQGELVDVKDIVEVVQKKIEESKK 531


>gi|325847052|ref|ZP_08169878.1| histidine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481024|gb|EGC84069.1| histidine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 432

 Score =  223 bits (567), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 127/465 (27%), Positives = 212/465 (45%), Gaps = 36/465 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDE 63
             ++ +   G  +    +  + + I   I   + +Y F PI+TP +E +D    K   + 
Sbjct: 2   NIVKPQTIAGVMELLPDDQLVFDHIKQIIEETFLSYQFLPIDTPAIEKNDILFAKGGGET 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
               K +F   D   + +SLR+DLT PLARYV+E+F  + FP + Y+IG V+R E++  G
Sbjct: 62  ---EKQIFG-IDSSKKDMSLRFDLTVPLARYVSEHFSDLNFPFKRYQIGKVYRGERNQKG 117

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+++F QCD+D +G+ + +   +  +          +        INNRK+L+G  E I 
Sbjct: 118 RYKEFYQCDIDIIGNDSLSIHNDALLPKVIYDIFQKLDFKGIKFHINNRKLLNGFFESIE 177

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +   +++      LR IDK  K G +  K LL E                 ++   ++  
Sbjct: 178 ISDKEEV------LRTIDKKAKIGDEKTKELLTELCG-------------EDKALKLMEL 218

Query: 244 LSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           ++   + K + E  E +      + G  EL  + + + K G +   I I  +I RGL+YY
Sbjct: 219 INNKRDNKELLEYLESLDLNDNYKLGLRELKEVYDYMIKFGIDDESIMIDLSITRGLDYY 278

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  VYE  L              GSV  GGRY+ L   F  QN+P  G SIG++RL   L
Sbjct: 279 TSTVYETFLDGYE--------SIGSVCSGGRYENLAGNFSKQNLPGVGLSIGLTRLFYQL 330

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L       ++    LI  MD   +           L+  G + +++L   K F  ++ 
Sbjct: 331 QELGLLEKYREDFTDCLIIPMDEKLNF--YAIDIGNDLKNKGYKVDIYLEDGK-FKKKIN 387

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           YAD+      II G  E    M+ +K++  G ++S +I++   + 
Sbjct: 388 YADKIGVKKVIIIGQEEYENKMVSVKNMEDGNQVSVKIEDIGDYL 432


>gi|37522126|ref|NP_925503.1| histidyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|39932050|sp|Q7NHH9|SYH_GLOVI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|35213126|dbj|BAC90498.1| histidyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 467

 Score =  223 bits (567), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 131/489 (26%), Positives = 228/489 (46%), Gaps = 65/489 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPNKGVFS 72
           G  D    E+  R  ++D+++ I+  YGF+P+ETP +E  ++L GK+  +     K ++ 
Sbjct: 9   GTRDFLPDEMIRREYVIDTLKTIFRKYGFEPLETPAIERWETLAGKYGEEG---EKLIYH 65

Query: 73  LQDDD-------GQ--WISLRYDLTAPLARYVAENFDT--------------IVFPCRTY 109
           +           G+    +LRYDLT PLAR V    D               +  P + Y
Sbjct: 66  VVSSGSLGTLKAGERTEHALRYDLTVPLARVVGMYGDQMVADPADPKKQTRRLPRPFKRY 125

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
           +I PV+R ++ G GR+R+F QCD D VGS++   + E+  +  +  +A+G    D+ + I
Sbjct: 126 QIQPVWRGDRPGEGRYREFHQCDADVVGSTSPLVETELIALTVEAFKALGF--ADFTVKI 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           N+R++L G++E+ G+       +   VL +IDKLDK   + V+L L             G
Sbjct: 184 NHRQLLKGLIEQAGIAP----TKEATVLTSIDKLDKLPPEKVRLELA------------G 227

Query: 230 ANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
             L ++Q+D +   ++++   E+ +     L+ G+ A ++G  EL  +   +   G +S 
Sbjct: 228 KGLNADQLDALFQVIALEGTSEQVLEGARSLLAGSEAAQRGIGELTKLLHYLEALGVDSA 287

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK--GQN 345
             +I   + RGL+YYTG ++E +               GSVG GGRYD L+        +
Sbjct: 288 YYRIDLALARGLDYYTGTIFETVSAAK----------VGSVGAGGRYDRLIYDLSGGKAD 337

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +PA G S G+ R++ A+  L    +  +    +++   D     +       + LR AG+
Sbjct: 338 LPACGTSFGLDRILAAMDQLGLFASLRRAGEVLVLHFGDPGVSQV--CFELVRGLREAGV 395

Query: 406 RAEMFLGSSK----NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           RAE+              QL YA+ +    A+I G  E ++G   ++DL   ++    + 
Sbjct: 396 RAELGYHEEPFTPNGMRQQLGYANEKGFAYAVIVGPDEMAQGQAALRDLTTRRQEKIPLA 455

Query: 462 NNESWREAR 470
                   R
Sbjct: 456 TAGQLIAGR 464


>gi|291613882|ref|YP_003524039.1| histidyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583994|gb|ADE11652.1| histidyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 423

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 103/496 (20%), Positives = 188/496 (37%), Gaps = 84/496 (16%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-E 63
           +    +  RG  D    E  +     + +R+  E YG+  I  PL+E +    + + +  
Sbjct: 2   SNPTLQAVRGMNDILPDEAGLWLWFEEVVRDWLEAYGYRNIRMPLVEPTALFKRAIGEVT 61

Query: 64  DRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           D   K ++S +DD +G  ++LR + TA   R V ++      P R Y  GP+FR+E+   
Sbjct: 62  DIVEKEMYSFRDDLNGDELTLRPEGTASCVRAVLQHNLLYNAPQRLYYSGPMFRHERPQK 121

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKI 174
           GR+RQF Q  V+ +G +    DAE  +M A   + +GI+          D      +R+ 
Sbjct: 122 GRYRQFHQIGVEAMGFAGPDIDAEQIVMCARLWKKLGIRDVALQINTLGDVAARQRHREK 181

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L    E+     D             D   +     +++L  +                 
Sbjct: 182 LIAYFEQHKDVLD------------ADGQRRLYSNPLRILDTKNPAMQE---------LV 220

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                ++  L  D       +  +++      +    L                      
Sbjct: 221 AAAPKLMDELDEDAITHFEAVQAILQQHGIAFEINPRL---------------------- 258

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            VRGL+YY   V+E +          +    G++  GGR+DGL+ +  G+  PA GF++G
Sbjct: 259 -VRGLDYYNRTVFEWVTT--------RLGAQGTICAGGRFDGLIEQIGGKPAPACGFAMG 309

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + RL+  L+             P+ +  +     +  +     + LR  G+R  +  G  
Sbjct: 310 VERLLALLQEDG----MQNPAAPLDVYVVHQGEQARIQAWRVAEDLRDGGLRVLLHCGGG 365

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +F +Q+K AD      A I G  E +  ++ +K L  G E                 Q 
Sbjct: 366 -SFKSQMKKADASAAVCAAIIGDDEVAANVVMLKPLRSGGE-----------------QQ 407

Query: 475 TIPISELVSTVKKILQ 490
            + + +L   V+++++
Sbjct: 408 RVGLDDLQHKVRELIK 423


>gi|150389940|ref|YP_001319989.1| histidyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949802|gb|ABR48330.1| histidyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 436

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 131/471 (27%), Positives = 222/471 (47%), Gaps = 39/471 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  +  +G  D    E  IRN I+  ++ ++E YG+ P+ETP L Y + L          
Sbjct: 3   LELKNVKGTKDFFPNEQIIRNGIIKKLQEVFELYGYQPLETPTLYYLEVLASKYAGGAEI 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K  +SL+D   + + LRYDLT P ++ +  N   +  P + Y IG VFR+     GR R
Sbjct: 63  LKETYSLKDQGERELGLRYDLTIPFSKVIGMN-PNLRMPFKRYEIGKVFRDGPVKLGRMR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + +G+   D ++  NNRK+L G L K+ ++ 
Sbjct: 122 EFIQCDVDVVGVKSMMAEAELMFMATEVFDKLGL---DIYLSYNNRKLLSGTLMKLKINK 178

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G++GVK  L E             NL  E ++ ++  L+ 
Sbjct: 179 E----LASDVILSLDKVEKIGIEGVKKELLEK------------NLQPEVVENIIELLNN 222

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
               S+     +   ++  ++G  EL  +++ +   G  S ++K +  + RGLE YTG V
Sbjct: 223 KEAASIDYYKGIASNSL-MQEGIQELEELNDYLDAMGIGS-KVKYNPFLARGLEIYTGTV 280

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN--VPATGFSIGISRLIVALKS 364
           YE  L    +          S+G GGRYD ++ +F       PA G S G+  +  AL  
Sbjct: 281 YEIFLKDGSIT--------SSMGAGGRYDDIIGKFIQNEVGYPAVGISFGLDVIYTALSM 332

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                N ++    V I  +  +    ++       LR  GI+ ++ +   +    +L YA
Sbjct: 333 --KRDNELESNLDVYIIPLGTE----AEALKMACELRGQGIKVDIDMTE-RKLKKRLDYA 385

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           ++   P  +I G  E     +++KD+  G E   +I    +    R+  +T
Sbjct: 386 NKEKIPYVLILGEDEVKSQRIKMKDMKSGTEEEMKISEIGNNVLRRIQSLT 436


>gi|229128599|ref|ZP_04257577.1| Histidyl-tRNA synthetase 1 [Bacillus cereus BDRD-Cer4]
 gi|228654792|gb|EEL10652.1| Histidyl-tRNA synthetase 1 [Bacillus cereus BDRD-Cer4]
          Length = 428

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 130/464 (28%), Positives = 212/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 4   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   +  P + Y IG VFR+     GRFR
Sbjct: 64  LKEIYTLQDQGKRELALRYDLTIPFAKVVAMN-PNLRLPFKRYEIGKVFRDGPIKQGRFR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 123 EFIQCDVDIVGVESVMAEAELMAMAFELFRTLNL---EITIQYNNRKLLNGILESINIPT 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 180 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 223

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 224 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 281

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 282 YEIFLKDRSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 333

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 334 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 384

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   I +   + 
Sbjct: 385 ANKENIPYVLIIGEDELSTNTVVLRNMKEGSEVKVPISSLSRYL 428


>gi|301386122|ref|ZP_07234540.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302060178|ref|ZP_07251719.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302135121|ref|ZP_07261111.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 419

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 97/471 (20%), Positives = 178/471 (37%), Gaps = 65/471 (13%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++  +      ++  + +NYG+  I  P++E++D   + + +  D   K +++ 
Sbjct: 1   MNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPVVEFTDLFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D +G  ++LR + TA   R V E+  T      + + IGP+FR+E+   GR+RQF Q  
Sbjct: 61  ADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQKGRYRQFHQIG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDGILEKIG 183
           V+         DAE+ +M       +GI+                   R  L   L    
Sbjct: 121 VEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARARYRDALVEFLSAHL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              D+            D   +     +++L  +            A L       +  +
Sbjct: 181 DQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQAVLVD--APKLADY 219

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +       L   +                               I+  +VRGL+YY+
Sbjct: 220 LDDESRIHFEGLKARLDAA-----------------------GIPYVINPKLVRGLDYYS 256

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +          +    G+V  GGRYDGLV +  G+     GF++GI RL++ L+
Sbjct: 257 KTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGVGFAMGIERLVLLLE 308

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +LE     I     V +      ++  +         R   +R ++  G+  +F +Q K 
Sbjct: 309 TLEQVPEEIARQVDVYLCAFGEAAELAALALTEQVRDRLPDLRLQVNAGAG-SFKSQFKK 367

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQ 473
           AD+     A+I G  E +  ++ +K L  +G++ +           + V Q
Sbjct: 368 ADKSGALYALILGEEELAAKIIGVKPLRGQGEQQNIAWDALSEHLASCVVQ 418


>gi|283769649|ref|ZP_06342545.1| histidine--tRNA ligase [Bulleidia extructa W1219]
 gi|283103917|gb|EFC05303.1| histidine--tRNA ligase [Bulleidia extructa W1219]
          Length = 423

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 99/469 (21%), Positives = 168/469 (35%), Gaps = 54/469 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + PRG  D   +E++  + +   IR I + Y +  I TP  E +    +     D  
Sbjct: 1   MSYQTPRGTYDILPQEMKRWHYVEKVIRQITKKYRYQEIRTPYFEETKVFKRENDSSDMV 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
           NK +++  D      +LR + TA + R   ++            Y +G +FR+E+   GR
Sbjct: 61  NKEMYTF-DMGKDSYTLRPEGTAGVIRSFDQHKLYGSMELPVRLYYLGAMFRHERPQKGR 119

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q  ++N+G+ +   DAE   +  D ++ +GI      I                 
Sbjct: 120 QRQFTQFGIENIGAKSPELDAETIALGYDLVKQMGISSIKVLINTLGDDESRA------- 172

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                                      +  L E    +  +         EQ  + +   
Sbjct: 173 -------------------------NYRQALKEHFQPHLEELCSDCRRRYEQNPLRILDC 207

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            ID ++        +  ++  E        +   +   G      ++   +VRGL+YYT 
Sbjct: 208 KIDHDQDCLHKAPRLVDSL-NEASREYFSRVLAALDALGIP---YEVDDHLVRGLDYYTH 263

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +   P            ++  GGRYD  V  + G ++   GF+IG+ RLI     
Sbjct: 264 TVFEVVSTRP------DSGAQATIFAGGRYDHFVEYYGGPDMSGIGFAIGMERLISLASD 317

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                             +     SL +     Q LRT G   E  L   ++  +Q K A
Sbjct: 318 EGFDFGKDITCDA---YVIGLGDVSL-EVLKMAQELRTNGFIVEANL-LPRSLKSQFKSA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR----EIKNNESWREA 469
           DR      II G  E   G + +K  +   +++      IK  ESW + 
Sbjct: 373 DRHEAKYVIILGEDEVKNGRVNVKRTSDKTQVTIVRQELIKQLESWDKD 421


>gi|84489457|ref|YP_447689.1| histidyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84372776|gb|ABC57046.1| HisS [Methanosphaera stadtmanae DSM 3091]
          Length = 426

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 104/482 (21%), Positives = 190/482 (39%), Gaps = 57/482 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRG  D   +++  RN + ++IRN+ ENYGF  I+TP+ E  +       +    
Sbjct: 1   MEFNKPRGTRDFLFEDMEERNYVENTIRNVVENYGFKEIKTPIFEDLELFTTKSGEG--I 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + ++  QD  G+ ++LR +LTA ++R    N      P + Y  G  FR E+   GRFR
Sbjct: 59  KEEIYHFQDKGGRDLALRPELTASVSRLYNNNLQKSAKPLKMYYFGSCFRYERPQAGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  ++ +G      +AE+  M  + L  VGIK  +Y I I +  I+ G+L ++ +  
Sbjct: 119 EFWQFGIEVIGGVPIYNEAEIIAMANEALTQVGIK--NYEINIGHLGIIKGVLNQLNISS 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +                     +   + +   +      +  +++SE  +I+ S ++I
Sbjct: 177 QQQT-------------------AIIASIDKEDYELLDKLLEDNDISSEYKNIITSIINI 217

Query: 247 DLEKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              +S +  L +L++      +    L    E++   G+  +   ++ +I RGL+YYTG 
Sbjct: 218 KGSRSDLETLKQLLEDIPESFEALENLDKTLEVLEVFGF--DDYVVNLSIARGLDYYTGI 275

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E  +                + GGG Y+         +      +         +++ 
Sbjct: 276 VFEIYVPD--------LGAEKQITGGGTYN----LTALFDSEKVESTGFAFGFDRIMEAY 323

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +       +  +    +         Q LR   I  ++ L   K   N   YA+
Sbjct: 324 HRQNIQVPISSKPKVLVIPVKKEFKLNAIEVAQQLRAHNIVTDIDLKGKKLKKNL-SYAN 382

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
             N    I+ G  E     + IKD+  G                   Q TIP + +VS +
Sbjct: 383 NHNFNKVIMIGQQEVEDETVTIKDMDSG------------------CQETIPQNTVVSEL 424

Query: 486 KK 487
            K
Sbjct: 425 LK 426


>gi|322436988|ref|YP_004219200.1| histidyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321164715|gb|ADW70420.1| histidyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 432

 Score =  222 bits (566), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 100/479 (20%), Positives = 184/479 (38%), Gaps = 68/479 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
             +  RG  D    E  + NR+    R ++E YGF  I TPL E ++   + +  + D  
Sbjct: 3   TIKAVRGTRDLLPPETELWNRVEGVARKVFERYGFGEIRTPLFETTELFVRGVGEETDVV 62

Query: 67  NKGVFSLQDD------DGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEK 119
           +K +++ +D         Q ++LR + TA + R   E+        R  + IGP FR E+
Sbjct: 63  SKEMYTWEDRARAASEKAQSLTLRPENTAGVVRAYIEHKMDAAGGLRKLFYIGPQFRRER 122

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADA-----EMCMMMADTLEAVGIKRN----DYHIGIN 170
              GR+RQF Q   + +G  +  A++     E+  M+A  L+ +G+K      +      
Sbjct: 123 PQRGRYRQFWQIGAEVLGPVSSGAESAVRDAEVLEMLASLLDELGVKGWRLEVNSVGSST 182

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           +R      L        D++          D   +     +++L  +   D   +   G 
Sbjct: 183 DRPRYVAALRAALEPVKDQM--------CEDNRRRAETNPLRVLDSKAPED--QEIINGL 232

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
              ++ +D                           E        + + +   G       
Sbjct: 233 PKIADYLD---------------------------EASKEHFAQVLKALDACG---VAYH 262

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YYT   +E  +      +        ++ GGGRYDGL     G   P  G
Sbjct: 263 VNPRLVRGLDYYTRTTFEFTVP-----DGSGLGTQNALLGGGRYDGLSEMLGGPKAPGIG 317

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F+IG  RLI+ L+   +     K    +    ++ ++ +L+  +   +     G+R E+ 
Sbjct: 318 FAIGEDRLILILQEQAAEQAESKMDAYIAPVGVEQNAAALALARELRRD----GLRVEVG 373

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            GS +      + AD+      +I G  E + G L++K  A G++         ++   
Sbjct: 374 DGSFR-LKKSFEAADKV-AKAVVILGEDEVASGNLKVKRFATGEQRDVSRTELGAYLHG 430


>gi|169629956|ref|YP_001703605.1| histidyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169241923|emb|CAM62951.1| Histidyl-tRNA synthetase [Mycobacterium abscessus]
          Length = 424

 Score =  222 bits (566), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 100/482 (20%), Positives = 181/482 (37%), Gaps = 71/482 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +KT      P+G  D    +      + D +       G+  IE P+ E +    + +
Sbjct: 1   MSEKT---FSAPKGIPDYVPPDSAQFLAVRDGLLEQARLAGYGYIELPVFEDTGLFARGV 57

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D  +K +++  D   + ++LR + TA + R V E+       P +    GP FR E
Sbjct: 58  GESTDVVSKEMYTFADRGDRSVTLRPEGTASVMRAVIEHGLDRGQLPAKLRYAGPFFRYE 117

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGIN 170
           +   GR+RQ  Q  V+ +G      DAE+  +      ++G            D      
Sbjct: 118 RPQAGRYRQLQQVGVEAIGVDDPALDAEVIAIADAGYRSLGLTGFRLEISSLGDASCRPQ 177

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R++L   L  + L    +   R+  +R +D                       + T  A
Sbjct: 178 YRELLQEFLFGLDLDEATRERARINPIRVLDDK----------------RPEVREMTANA 221

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L  + +                             +       +   +   G    +  
Sbjct: 222 PLMLDHLS---------------------------GEAKAHFEQVLSHLDALG---VQYV 251

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YYT   +E +                 +GGGGRYDGL+++  GQ++   G
Sbjct: 252 VNPRLVRGLDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMAQLGGQSLSGIG 303

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F +G+ R ++AL++   +  +        +  +    D+ S        LR AGIR ++ 
Sbjct: 304 FGLGVDRTVLALRAEGVTVGDSGRCE---VFCVPLGQDAKSVLVKVAAQLRGAGIRTDIA 360

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            G  +     ++ ADR    +A++ G  E   G +++K LA G +    I +      AR
Sbjct: 361 YG-DRGLKGAMRGADRSGASIALVAGDREIGEGNIELKTLADGVQQPVPIGSIVGEVTAR 419

Query: 471 VA 472
           +A
Sbjct: 420 LA 421


>gi|302533393|ref|ZP_07285735.1| histidyl-tRNA synthetase [Streptomyces sp. C]
 gi|302442288|gb|EFL14104.1| histidyl-tRNA synthetase [Streptomyces sp. C]
          Length = 419

 Score =  222 bits (566), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 98/476 (20%), Positives = 178/476 (37%), Gaps = 70/476 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             + P+G  D           + ++I     N G+  IETP  E      + + +  D  
Sbjct: 3   TFQAPKGTYDLIPPVSVTYLAVREAISAPLRNSGYGYIETPGFEDVGLFARGVGESTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
           +K +++     G  ++LR + TA + R   E+            +  G  +R EK   GR
Sbjct: 63  SKEMYAFTTKGGDQLALRPEGTASVLRAALESSLHKKGNLPVKLWYSGSYYRYEKPQKGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILD 176
           +R F Q   + +G+     DAE+ ++      ++G++          D       R+ L 
Sbjct: 123 YRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLRNFRILLNSLGDKECRPVYREALQ 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G L  + L  +      +  LR +D         V+  L                     
Sbjct: 183 GFLRGLDLDEETVRRAEINPLRVLDDKRP----EVQKQLV-------------------G 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++  +L    +    E+  LV       +   +L                       V
Sbjct: 220 APVLRDYLCDACKAYHEEVRALVTAAGVAFEDDEKL-----------------------V 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYT   +E +                +VGGGGRYDGL     G  +P+ G+++G+ 
Sbjct: 257 RGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMIGGPALPSVGWALGVD 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R ++AL++     +         +       ++          LR AG+ A+M  G  K 
Sbjct: 309 RTVLALEAEGVELDIPASTAVFAVAL----GEAKPAVFGLVTELRRAGVAADMSYG-GKG 363

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +K A+R    LAI+ G  + + G++Q+KD+  G++ +  + +  +   AR+A
Sbjct: 364 LKGAMKDANRSGARLAIVAGDRDLAEGVVQLKDMESGEQAAVAVADLVAEVRARLA 419


>gi|298480724|ref|ZP_06998920.1| histidine--tRNA ligase [Bacteroides sp. D22]
 gi|295085094|emb|CBK66617.1| histidyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298273158|gb|EFI14723.1| histidine--tRNA ligase [Bacteroides sp. D22]
          Length = 461

 Score =  222 bits (566), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 150/510 (29%), Positives = 225/510 (44%), Gaps = 82/510 (16%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
           +  +P+G  D    E+  RN I ++IR++Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4   KPSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGDEGD-- 61

Query: 67  NKGVFSLQDDD-------GQWI---------------SLRYDLTAPLARYVAENFDTIVF 104
            K +F +Q+          + +                LRYDLT P ARYV  + D I F
Sbjct: 62  -KLLFKIQNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITF 120

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
           P + Y+I PV+R ++   GR+R+F QCD D VGS +   + E+  ++        I    
Sbjct: 121 PFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSRFNI---R 177

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
             I INNRKIL GI E IG          + +  AIDKLDK GL  V   L E       
Sbjct: 178 VCIKINNRKILSGIAEIIGESDK-----IVDITVAIDKLDKIGLDNVNAELKEK------ 226

Query: 225 DFTKGANLTSEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV-RK 281
                  ++ E I  +     LS    + +++L ++++ +  G +G  E+  I + +   
Sbjct: 227 ------GISDEAIAKLQPIILLSGTNAEKLNKLRKILRDSEIGLQGVEEIDFIRKTLWND 280

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
                N+++I  T+ RGL YYTG ++E          K   V  GS+ GGGRYD L   F
Sbjct: 281 VPRLKNKMEIDLTLARGLNYYTGAIFEV---------KALDVQIGSITGGGRYDNLTGVF 331

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
             +NV   G S G  R+   L  LE       +   VL   +      +S Y      +R
Sbjct: 332 GLENVSGVGISFGADRIFDVLNQLELYPKEATDGTKVLFLNLGEKESKISMY--ILNKVR 389

Query: 402 TAGIRAEMFLGSSKNFG---NQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELS 457
            AGI AE+F   ++       Q+ YA  +N P   I    E +    +++K++  GK   
Sbjct: 390 NAGIHAEIFPDIARKNKQQNKQMSYAKAKNIPFVAIVEEKEMNNKKNIRLKNMKTGK--- 446

Query: 458 REIKNNESWREARVAQITIPISELVSTVKK 487
                             +   EL++ VKK
Sbjct: 447 ---------------YKFVSAEELIAVVKK 461


>gi|309775571|ref|ZP_07670571.1| histidine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916665|gb|EFP62405.1| histidine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 445

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 101/473 (21%), Positives = 195/473 (41%), Gaps = 50/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++PRG  D   +EI   +R+ + IR     Y +  I TP+ E+++   +     D  
Sbjct: 1   MNYQVPRGTQDILPEEIGKWHRLEELIRQFTYVYNYQEIRTPIFEHTNVFKRGNDSSDMV 60

Query: 67  NKGVFSLQ-DDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
           NK +++ Q ++    ++LR + TA +AR   E+        P + Y +GP  R+E+   G
Sbjct: 61  NKEMYTFQLENSSTSLTLRPECTAGVARAFVEHKMYGYADLPIKMYYVGPQCRHERPQKG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R R F Q  V+ +G+ +   D E   +    + A+G+K     I             K  
Sbjct: 121 RMRIFNQFGVEVIGAKSPLLDVETIALGWSFISALGLKDMKVLINTLGDDESRAAYRKAL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                +  +  I     D   ++    +++L  + + D+     K        +  M  +
Sbjct: 181 ----KEHFKNDISHMCADCQRRYEQNPLRIL--DCKVDHELPIMKN-------VPKMADY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ + +    ++ E +       +  ++L                       VRGL+YYT
Sbjct: 228 LNEESKAYFKQVLEGLDALGIPYEVDDKL-----------------------VRGLDYYT 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-VPATGFSIGISRLIVAL 362
             V+E +     M          +V  GGRYDGLV  F G   +   G+++G+ RL++AL
Sbjct: 265 HTVFEVVSVNKEM------GAQSTVFAGGRYDGLVEYFGGPQGMSGIGWAMGLERLLIAL 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++   S  + + +       +    ++ +        LR AG R++M    +++F  Q K
Sbjct: 319 EAEGISLADEEGLDA---YVLCLSPEAATTALQVVTELRAAGYRSDMDY-LNRSFKAQFK 374

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             DR+   +AI+ G  E   G + +K++   ++L+  +       +A   +  
Sbjct: 375 TVDRKKAKVAIMIGETEVQNGTVNMKEIETQEKLTVALDAVVDTMDAMFHETE 427


>gi|297182854|gb|ADI19005.1| histidyl-tRNA synthetase [uncultured alpha proteobacterium
           HF0070_05I22]
          Length = 417

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 98/454 (21%), Positives = 169/454 (37%), Gaps = 54/454 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
           + +  RG AD     +     ++D+ RN    YGF  + TP+LE+S+   + L    D  
Sbjct: 3   KLQPVRGTADLLPDLMAQHRLVIDTARNATARYGFQEMATPILEFSEVFSRPLGNSSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K  +S  D  G+ ++LR + TA + R +     T   P + +  GP+FR E+   GR R
Sbjct: 63  TKENYSFVDRGGEQLTLRPENTAGVVRAMISGGLTQSLPLKYFYAGPMFRYERPQKGRMR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  ++ +G +   ADAE+    A  L  +G+     H  ++   + D          
Sbjct: 123 QFHQVGIEYLGPNDALADAEVISAGARFLAELGVL---PHCVLHLNSLGDAESRAAYRAA 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +      + D   +  +  +++L  +   D             +    +  +L+ 
Sbjct: 180 LVGFLQTHESALSDDSKRRLAVNPLRILDSKEAGDRD---------ILQTAPKLQDYLNA 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +     L   +                                   +VRGL+YY    
Sbjct: 231 ASKAHFQTLTTALDAA-----------------------GVTWVFDPFLVRGLDYYCHTA 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +               G+V  GGRYDGL     G  V  TG++ GI           
Sbjct: 268 FEFVT--------DALGTQGTVLAGGRYDGLAEMLGGPAVAGTGWAAGI--------ERL 311

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +       +    +  +  D ++        + LR  GI  ++   ++   G +LK A R
Sbjct: 312 AMLAGDAAIAAPQVAMLSTDPETDLAAFQLAEKLRDTGI--DIEFPTAGAIGKKLKKAAR 369

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
            N  LAII G  E ++  LQ++DL  G +    +
Sbjct: 370 SNIRLAIILGGDELAKNTLQLRDLTTGTQAEIAM 403


>gi|152990565|ref|YP_001356287.1| histidyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|254782339|sp|A6Q371|SYH_NITSB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|151422426|dbj|BAF69930.1| histidyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 406

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 106/461 (22%), Positives = 170/461 (36%), Gaps = 58/461 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  RG  D            L +  +   NYGF  IETPLLE +    + + +  D 
Sbjct: 1   MAIKALRGMKDILPPLSEKYLNFLQTASHYAHNYGFSYIETPLLEETALFKRSVGESSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGR 124
             K ++   D  G  I LR + TA + R   E+           +  G +FR E+   GR
Sbjct: 61  VGKEMYQFIDKGGNDIVLRPEGTAGVVRSFIEHKLDRQGGTHRFFYYGSMFRYERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           FRQF Q  V++ G  +   DA +  +    L+   I        +     L    E++  
Sbjct: 121 FRQFHQFGVESFGEPSVYEDAAIITLAKAILDHFEIDYTLKINSLGCPVCLKPYREELIK 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +D+ +         D   +  L  +++L  +          +      E    +++ L
Sbjct: 181 FLEDQEHI------CDDCKRRRKLNPIRVLDCKN---------EQCQQIYENAPKLINNL 225

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +  +    L  L+       +    L                       VRGL+YYT 
Sbjct: 226 CEECNQEFQTLKNLLDNEGIIYEVDENL-----------------------VRGLDYYTR 262

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +                +V GGGRYD LV    G+  PA GF+IGI R++  +K 
Sbjct: 263 TAFEFVSNA--------LGAQNAVAGGGRYDNLVEMLGGKPTPAVGFAIGIERILDLIKD 314

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                   K +            ++L+        LR +  R  M     K+    LK A
Sbjct: 315 --------KPVQREGYFIGVMLPEALNIAFDIATKLRQSN-RVIMEYK-PKSLKALLKGA 364

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           DR N   A+I G  E + G++ IKDL + +E   +I+N   
Sbjct: 365 DRNNAKYALIIGEDEYNEGLVWIKDLERKEEKRVDIQNFME 405


>gi|294788426|ref|ZP_06753669.1| histidine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483857|gb|EFG31541.1| histidine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 429

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 100/498 (20%), Positives = 176/498 (35%), Gaps = 92/498 (18%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               ++I+   + +G++ I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTSANWQAFENTIQKWTKRFGYNQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +    ++LR + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDTLSLTLRPEGTASCLRAVVEHNLLHNGPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGI 169
           +   GR+RQF Q  ++ +G      D E+  M A+    +G             +     
Sbjct: 124 RPQKGRYRQFHQVGIEALGYETPDIDVELIAMCANLWRELGILDYLTLELNSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L K     D+            D   +     +++L  +            
Sbjct: 184 AHRSALVEYLTKFENQLDE------------DSKRRLHTNPLRVLDTKN---------PD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +V FL    +     + +L+ G                        + + 
Sbjct: 223 LQEICNNAPKLVDFLGEYSQNHYKTVKKLLNGL-----------------------NIQF 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +  +VRGL+YY   V+E            K     +V GGGRYDGL+    G+   + 
Sbjct: 260 VENPRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAASI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +    S            +  M     S      +   LR  G     
Sbjct: 312 GFAMGIERLLLLVCEYGSLKTEHTP----DVFVMQQGEQSTLVAMQHAATLRENGFNVAQ 367

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           F GS+K   NQ K A+       +I    E    ++ IKDL                   
Sbjct: 368 FSGSTK-LKNQFKKANDSGARFGLIIAESEIEENLVTIKDLR-----------------E 409

Query: 470 RVAQITIPISELVSTVKK 487
              QIT+P ++LV  + +
Sbjct: 410 DKGQITVPAAQLVQQLNE 427


>gi|225460059|ref|XP_002271456.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 851

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 120/487 (24%), Positives = 209/487 (42%), Gaps = 89/487 (18%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            +LP+G  D   +++ +R +    I ++++ +G   ++TP+ E  ++L GK+  D    +
Sbjct: 444 PKLPKGTRDFAKEQMAVREKAFSIIGDVFKRHGAMALDTPVFELRETLMGKYGED----S 499

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+  SLRYDLT P ARYVA N  T     + Y+I  V+R +    GR+R+
Sbjct: 500 KLIYDLADQGGELCSLRYDLTVPFARYVAMNGLT---SFKRYQIAKVYRRDNPSKGRYRE 556

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D V                                +N+RK+LDG+L+  G+  +
Sbjct: 557 FYQCDFDXV-------------------------------KLNHRKLLDGMLDICGVPPE 585

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +   +  +IDKLDK   + +K  + E              LT E  + + +F+   
Sbjct: 586 ----KFRTICSSIDKLDKQTFEQIKREMVEE-----------KGLTIETAEKIGTFVKER 630

Query: 248 LE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                    + +      G  A      +L ++   + KS    N++    ++ RGL+YY
Sbjct: 631 GPPLELLSKLKQEGSEFLGNNASVAALTDLEILFTALEKSKC-INKVVFDLSLARGLDYY 689

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG ++EA+               GS+  GGRYD L+  F  + VPA G S+GI R+   +
Sbjct: 690 TGVIFEAVFKGAT--------QVGSIAAGGRYDNLIGMFGTKQVPAVGTSLGIERVFNIM 741

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L+   N         +      +D LS+       L  A ++AE     +K       
Sbjct: 742 EQLQKDQNQAIRATETQVLVSIFGND-LSQAAELVSELWNAKLKAE--YMVNKRPTKHFD 798

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A+    P  I+ G  E++ G+++++D    +E+                   +P S +V
Sbjct: 799 RAEESRIPWMILVGEREQNEGIVRLRDTTTREEI------------------LVPRSRIV 840

Query: 483 STVKKIL 489
             +++ L
Sbjct: 841 EELQRRL 847


>gi|195952939|ref|YP_002121229.1| histidyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932551|gb|ACG57251.1| histidyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 406

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 99/452 (21%), Positives = 177/452 (39%), Gaps = 60/452 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RGF D   +E +    I D+ R ++E Y F+ I  P++EY +   + + +  D   
Sbjct: 4   IKAIRGFDDIFFEETKKFRYITDTFRKLFEVYNFEEIILPIVEYKELFDRSVGEVTDIVQ 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +F  +D   + ++LR + TA + R V E+      P  + +  GP+FR E+   GR R
Sbjct: 64  KEMFVFEDKSKRLLTLRPEGTAGVVRSVVEHGLLYKKPFLKLFYEGPMFRYERPQSGRKR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   + +G  +  AD E+  +  D  + + I        I          E +  + 
Sbjct: 124 QFHQIGCEVLGLDSPIADFEIINLCFDAFKKLNIDITLEINSIGCPVCRPKYREALTNYL 183

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            D            D  ++     +++L  + + +   D TK A +       M+ +L  
Sbjct: 184 KDIEGL------CKDCEERRFKNPLRIL--DCKVETCKDLTKEAPI-------MLDYLCE 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D       L   +                              K +  +VRGL+YYT  V
Sbjct: 229 DCSNHYKSLKIYLDSF-----------------------GIPYKENPRLVRGLDYYTKTV 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +                ++  GGRYD LV    G   PA GF+ GI R+++ LKS  
Sbjct: 266 FEFVKDNL------------TLLAGGRYDNLVESLGGPKTPAVGFAAGIERIMLFLKSQY 313

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        +  +++      +      +LR  G R E+ +    N   +L+ AD+
Sbjct: 314 KEE-------LYAVVYIENTVLEALEALKVANILREKGKRVEL-ISKGSNLKKKLEIADK 365

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            +    +I G  E  +G+  +K+++  ++   
Sbjct: 366 LHASYTLIIGPEELKKGIYILKNMSTKEQQKI 397


>gi|182414470|ref|YP_001819536.1| histidyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|229558700|sp|B1ZUW6|SYH_OPITP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|177841684|gb|ACB75936.1| histidyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 437

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 105/463 (22%), Positives = 185/463 (39%), Gaps = 33/463 (7%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            LP GF +     +  RN I    R     +GF   + P+LE  +         D     
Sbjct: 6   SLP-GFREFYPDALARRNHIFRLWRQTAVAFGFAEYDAPVLEPLELYKTKSG--DEIEAQ 62

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +FS  D  G+ ++LR ++T  + R V    + +  P + + I   +R E+   GR R F 
Sbjct: 63  LFSFTDKGGREVALRPEMTPTVCRMVGAKANALKRPIKWFSIAEYYRYERAQKGRERAFF 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q + D        A+ E+  ++   L+A G+   D++I +++R +    LE +GL     
Sbjct: 123 QFNADLFAEPGPEAEIELIALLTQCLKAFGLTEQDFYIRLSDRNLWFFYLEALGLDE--- 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 VL A+DK +K G    K    +              L       ++ FL I   
Sbjct: 180 -PRIRAVLSAVDKFEKVGDDAFKPYAEQFG-----------PLDLALKQRVLEFLQIKTL 227

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
            S+ +    + G     +  +    + + +   G +   I++   +VRGL YYTG V+EA
Sbjct: 228 ASLEQTLAPLGGEKLAARLGD-WRKLLDGLAAMGLSP-FIEVDLGVVRGLAYYTGFVFEA 285

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                      +     ++ GGGRY+ LV +  G ++PA GF+IG   L + L +     
Sbjct: 286 F---------DRKGELRAIAGGGRYNDLVKKLGGPDLPAVGFAIGDVTLGLLLDARGLMP 336

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
             ++      +      +            LR AG + + +      FG Q K A     
Sbjct: 337 AFVQASDVYCVI---GGAAERQAAFADVNALRAAGFKVD-YPLKDVPFGKQFKLAADSGA 392

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            LA+I G  E ++ +++++DL    E     +  ++      +
Sbjct: 393 KLALIYGPDELAKNVVKLRDLTTRTETDVPREQVQAMVRDFFS 435


>gi|332673989|gb|AEE70806.1| histidine--tRNA ligase [Helicobacter pylori 83]
          Length = 442

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 136/455 (29%), Positives = 219/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY++ L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAEVLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ I IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIVQVIIASLKALDL--EDFCISINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   VLR +DKL+K GL GV+  L +             +L    I  ++  + I
Sbjct: 177 -----QVNEVLRIVDKLEKIGLNGVEEELKKE-----------CDLDLNTIKKLLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNGMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ R      + G  E     L +K++  G +L
Sbjct: 389 SYANHRGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|229046982|ref|ZP_04192608.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH676]
 gi|229110740|ref|ZP_04240303.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock1-15]
 gi|228672619|gb|EEL27900.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock1-15]
 gi|228724340|gb|EEL75671.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH676]
          Length = 425

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 128/464 (27%), Positives = 213/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   +  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRELALRYDLTIPFAKVVAMN-PNLRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMAMAFELFRTLNL---EITIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDRSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   I +  ++ 
Sbjct: 382 ANKENIPYVLIIGEDELSTNTVVLRNMKEGSEVKVPISSLSNYL 425


>gi|328943939|ref|ZP_08241404.1| histidyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|327491908|gb|EGF23682.1| histidyl-tRNA synthetase [Atopobium vaginae DSM 15829]
          Length = 439

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 102/483 (21%), Positives = 176/483 (36%), Gaps = 66/483 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           + A+  +G  D     +R  N  L     ++  + FD IETP LE  D+    + +  D 
Sbjct: 3   IVAQRIQGTEDLYGDNMRAWNFALTCAAELFNTHAFDMIETPALEQVDTFVHGIGESSDV 62

Query: 66  PNKGVFS----------LQDDDGQWI------SLRYDLTAPLARYVAENFD--TIVFPCR 107
             K +F           L     Q +      +LR + TA + R V E+        P +
Sbjct: 63  VRKEMFRVFSGALLENLLSSQSEQHLKPKQRMALRPEGTAGVVRAVVEHNLIPQGASPLK 122

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            +    +FR E+   GR RQF Q   + +G+    ADAE  MM+ +    +G + N   +
Sbjct: 123 VWYGEAMFRGERPQKGRLRQFHQIGCEWLGADDPCADAECIMMLMEFYTRMGFEPNQLVL 182

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            IN+    D               +        D L++  +  ++    + + ++  +  
Sbjct: 183 HINSMG--DQACRPAYRESVRAFIKDHQDQMCPDCLERATINPLRAF--DCKNEHCHEIM 238

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
             A L  +        L  + +     +   +                            
Sbjct: 239 SDAPLAKDN-------LCAECKTHYERVKAFLDEAHVA---------------------- 269

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
                 T+VRGL+YYT  V+E                 GS+GGGGRYDGLV    G+   
Sbjct: 270 -YVEDPTLVRGLDYYTRTVFEIECPQA---------HVGSIGGGGRYDGLVELEGGRPTC 319

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             G+++G  R+I+AL++  +         P  +                   LR AGIR 
Sbjct: 320 GLGWALGFERMILALQTFGTQPWKT---TPACVYVAFTSDAERMYAFNVCAQLRQAGIRT 376

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E      ++  +Q K AD+    L ++ G  E     + ++D+   ++   ++ N  S  
Sbjct: 377 ESNY-QGRSLKSQFKQADKLGARLCVVIGEHETQNQSVTVRDMQTHEQTEIQLTNLVSQL 435

Query: 468 EAR 470
            A+
Sbjct: 436 TAK 438


>gi|217032200|ref|ZP_03437698.1| hypothetical protein HPB128_2g2 [Helicobacter pylori B128]
 gi|298735797|ref|YP_003728322.1| histidyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946071|gb|EEC24682.1| hypothetical protein HPB128_2g2 [Helicobacter pylori B128]
 gi|298354986|emb|CBI65858.1| histidyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 442

 Score =  222 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 133/455 (29%), Positives = 219/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+ +L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAQTLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCVSINHRKILNGICEYFGIS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL-- 244
                +    LR +DKL+K GL GV+  L +             +L S  I  ++  +  
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKKE-----------CDLNSNTIKELLEMVQI 220

Query: 245 ---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
               +   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 QQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNDMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +     +I G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVVIIGEEEFKSETLSLKNMHSGMQL 423


>gi|323346276|gb|EGA80566.1| Hts1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 526

 Score =  222 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 136/526 (25%), Positives = 230/526 (43%), Gaps = 71/526 (13%)

Query: 3   KKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           KK KL+   + P+G  D    ++ IR  I  ++  +++ +G   I+TP+ E  + L    
Sbjct: 27  KKGKLQVSLKTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKY 86

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K +++L+D  G+  SLRYDLT P ARYVA N    +   + Y I  V+R ++ 
Sbjct: 87  GED---SKLIYNLEDQGGELCSLRYDLTVPFARYVAMNN---IQSIKRYHIAKVYRRDQP 140

Query: 121 --GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
               GR R+F QCD D      +   D+E   ++ + L ++GIK  D+ I +N+RKILDG
Sbjct: 141 AMTKGRMREFYQCDFDVAGTFESMVPDSECLSILVEGLTSLGIK--DFKIKLNHRKILDG 198

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I +  G+  +D       +  A+DKLDK   + VK  + E               + E  
Sbjct: 199 IFQIAGVKDED----VRKISSAVDKLDKSPWEAVKKEMTEE-----------KGQSEETA 243

Query: 238 DIMVSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           D +  ++ ++       ++      +      ++G +++  + +       +S  I    
Sbjct: 244 DKIGEYVKLNGSLKEIHAVLSADANITSNEKAKQGLDDIATLMKYTEAFDIDS-FISFDL 302

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKP--------------VVFGSVGGGGRYDGLVS 339
           ++ RGL+YYTG +YE +       E                  V  GS+  GGRYD LV+
Sbjct: 303 SLARGLDYYTGLIYEVVTSASAPPENASELKKKAKSAEDASEFVGVGSIAAGGRYDNLVN 362

Query: 340 RFKG------QNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---S 389
            F          +P  G S G+ R+   +K    SST        V +       D    
Sbjct: 363 MFSEASGKKSTQIPCVGISFGVERIFSLIKQRINSSTTIKPTATQVFVMAFGGGKDWTGY 422

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +    T+ L  AGI AE    +  N   Q   A++  C +A+I G  E   G L++K 
Sbjct: 423 LPERMKVTKQLWDAGIEAEYVYKAKANPRKQFDAAEKAGCHIAVILGKEEYLEGKLRVKR 482

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           L  G+E + +                +  +++V  V++ L +  E+
Sbjct: 483 L--GQEFADDDGEL------------VSAADIVPIVQEKLSQIHED 514


>gi|284044469|ref|YP_003394809.1| histidyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948690|gb|ADB51434.1| histidyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 419

 Score =  222 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 98/454 (21%), Positives = 173/454 (38%), Gaps = 56/454 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
           + + PRG  D    +   R  +  + R I    G+  IETP  E ++   + +    D  
Sbjct: 4   KLQAPRGTYDVLPDDAARREHVEAAARQILGAAGYRRIETPTFEATELFARGVGASTDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++ +D  G+ ++LR + TAP+AR   E+    +  P + + +   FR E+   GR+
Sbjct: 64  QKEMYTFEDGGGRSVTLRPEGTAPVARAYVEHGMQKLPQPVKLWYLSSFFRYERAQAGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +GS+    DAE  +++A+ LE++G++     +G                 
Sbjct: 124 RQFWQVGAEAIGSADPAVDAEAILLLAELLESLGVRDVRLRLGSLGTPETRAAYRA---- 179

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 E    LRA +       + V+  +             G         +++  L+
Sbjct: 180 ------ELQAYLRAHEGELS---EEVRGRIDLNPLRAFDADHPGTRSVMAGAPLLLDRLT 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +      E+  L+ G                            ++  T+VRGL+YY   
Sbjct: 231 GEDADHFAEVRALLDGADLA-----------------------YEVDPTLVRGLDYYART 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           ++E                   V GGGRYDGLV +  G   P  G++ GI R+++A    
Sbjct: 268 LFEFT--------SDALGAQSGVAGGGRYDGLVEQLGGPPTPGIGWAAGIERILLATGEE 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     + +     D  + +     T   R AG+ A+  L + ++   QLK A 
Sbjct: 320 RVPPPILD----LYVAYAVADRPTRAIGFELTWEARRAGLSAQFEL-AGRSLKGQLKQAA 374

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           R       I G          +KD+  G++   E
Sbjct: 375 RAGARFVAILGEDG-----ATLKDMETGEQEQLE 403


>gi|325479652|gb|EGC82744.1| histidine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 428

 Score =  222 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 131/461 (28%), Positives = 209/461 (45%), Gaps = 36/461 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDE 63
             ++     G  +   KE  + + I + I + Y+ Y F PI+TP++E ++    K   + 
Sbjct: 2   KIVKPSTIAGVMELLPKEQLVFDNIKEIIEDTYKKYQFMPIDTPVIEKNEILFAKGGGET 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
               K ++ +  D  + +SLR+DLT PLARYV+E+F  + FP + Y IG V+R E++  G
Sbjct: 62  ---EKQIYEIASDS-KDMSLRFDLTVPLARYVSEHFQDLNFPFKRYHIGKVYRGERNQKG 117

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD+D +G ++ +   +  +          +   +    INNRK+L+G    +G
Sbjct: 118 RYREFYQCDIDIIGHNSLSIYNDALLPRVIYEIFTKLDFPEITFKINNRKLLNGFFRSLG 177

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +           VLR IDK DK G++     L +   +                  +V F
Sbjct: 178 IEDS------TDVLRTIDKKDKIGIENTFEELSKLTDEK-------------TAKTIVDF 218

Query: 244 L-SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           + + D    +              +G +EL  +   +   G   + IKI   I RGL+YY
Sbjct: 219 IENSDSNSELLYKLFDFSDDELFLEGVDELNKVYRYMIDLGIPDDNIKIDLAITRGLDYY 278

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  VYE  +              GSV  GGRY+ L S F  Q +P  G SIG++RL   L
Sbjct: 279 TSTVYETFINGYEK--------IGSVCSGGRYENLASNFSKQKLPGVGMSIGLTRLFYQL 330

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L      IK +  +LI  MD   +           LR  G   +++L S K F  ++ 
Sbjct: 331 QELGLIDEKIKSLTDILIIPMDESIN--EYAIEILNKLRDNGESVDIYLESGK-FKKKMN 387

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           YAD+      II G  E S+    IKD+  G+++S++    
Sbjct: 388 YADKCGIRRVIILGEEEMSKREYSIKDMETGEQISKKFGEL 428


>gi|212697522|ref|ZP_03305650.1| hypothetical protein ANHYDRO_02095 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675521|gb|EEB35128.1| hypothetical protein ANHYDRO_02095 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 432

 Score =  222 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 125/465 (26%), Positives = 214/465 (46%), Gaps = 36/465 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDE 63
             ++ +   G  +    +  + + I   I   + +Y F PI+TP +E +D    K   + 
Sbjct: 2   NIVKPQTIAGVMELLPDDQLVFDHIKQIIEETFLSYQFLPIDTPAIEKNDILFAKGGGET 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
           ++   G++S      + +SLR+DLT PLARYV+E+F  + FP + Y+IG V+R E++  G
Sbjct: 62  EKQIFGIYS----SKKDMSLRFDLTVPLARYVSEHFSDLNFPFKRYQIGKVYRGERNQKG 117

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+++F QCD+D +G+ + +   +  +          +        INNRK+L+G  E I 
Sbjct: 118 RYKEFYQCDIDIIGNDSLSIHNDALLPKVIYDIFQKLDFKGIKFHINNRKLLNGFFESIE 177

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +   +++      LR IDK  K G +  K LL E                 ++   ++  
Sbjct: 178 ISDKEEV------LRTIDKKAKIGDEKTKELLTELCG-------------EDKALKLMEL 218

Query: 244 LSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           ++   + K + +  E +      + G  EL  + + + K G +   I I  +I RGL+YY
Sbjct: 219 INNKRDNKELLKYLESLDLNDNYKLGLRELKEVYDYMVKFGIDDESIMIDLSITRGLDYY 278

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  VYE  L              GSV  GGRY+ L   F  QN+P  G SIG++RL   L
Sbjct: 279 TSTVYETFLDGYE--------SIGSVCSGGRYENLAGNFSKQNLPGVGLSIGLTRLFYQL 330

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L       ++    LI  MD   +           L+  G + +++L   K F  ++ 
Sbjct: 331 QELGLLEKYREDFTDCLIIPMDEKLNF--YAIDIGNDLKNKGYKVDIYLEDGK-FKKKIN 387

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           YAD+      II G  E    M+ +K++  G ++S +I++   + 
Sbjct: 388 YADKIGVKKVIIIGQEEYENKMVSVKNMEDGNQVSVKIEDIGDYL 432


>gi|323341709|ref|ZP_08081942.1| histidine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464134|gb|EFY09327.1| histidine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 426

 Score =  222 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 96/463 (20%), Positives = 172/463 (37%), Gaps = 48/463 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
               PRG  D    E +    I    R + + Y    + TP+ E++    +     D  N
Sbjct: 4   NYRAPRGTQDVFGAEAKKWQHIERIAREMCDRYHITEMRTPVFEHTHVFARGNDGSDVVN 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP--CRTYRIGPVFRNEKHGPGRF 125
           K +++ +D   + ++L+ + TA L R   E+          R + I P FR E+   GR 
Sbjct: 64  KEMYTFEDRGNRSLTLKPEGTAGLVRSFVEHKLYATGGALQRYFYIAPNFRYERPQAGRL 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R F Q  V+ +G +    D E  ++  + L+ VGI +    +     +      +K    
Sbjct: 124 RIFHQFGVEFLGEANPYIDIESMLVGINILKEVGITQFKLVVNTLGDQESQDAYKKALRD 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                    +     D   ++    +++L  + + D   +  K A +  + +        
Sbjct: 184 H----FAGHLDTMCADCQRRYEQNPLRML--DCKVDQEHEAMKTAPINHDYL-------- 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                             A  + F EL    +            +I S +VRGL+YY   
Sbjct: 230 ----------------NDASREYFEELKRTLD------EQGIAYEIDSRLVRGLDYYHHT 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           VYE I   P            ++  GGRY  LV  F G +V A GF++G+ R    L   
Sbjct: 268 VYELISTDPKA------ASQSTIFAGGRYSKLVEYFGGPSVDAIGFAMGLER---LLLYA 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           + +         + +  M    ++        + LR AG  A+M    +K+   Q K  D
Sbjct: 319 DLAGVEFDTEDRIDVFGMPLGHEANGSMFKMIETLREAGYDADMDYY-NKSMKAQFKQVD 377

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           R N  +A+I G+ E +  ++ +K++   ++      +      
Sbjct: 378 RFNAKIAMICGSDEVAENVVTLKNIETQEQCRVAHDDVVEQVR 420


>gi|289677945|ref|ZP_06498835.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
 gi|302185744|ref|ZP_07262417.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 419

 Score =  222 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 98/473 (20%), Positives = 181/473 (38%), Gaps = 69/473 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++  +      ++  + +NYG+  I  P++E+++   + + +  D   K +++ 
Sbjct: 1   MNDILPEQTPLWRHFEGTVARLLDNYGYRQIRMPIVEFTELFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D +G  ++LR + TA   R V E+  T      + + IGP+FR+E+   GR+RQF Q  
Sbjct: 61  ADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQKGRYRQFHQIG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDGILEKIG 183
           V+         DAE+ +M       +GI+                   R  L   L    
Sbjct: 121 VEVFNLDGPDIDAELIVMTWRLWGLLGIRNAVKLELNSLGTSEARARYRDALVEYLSARL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              D+            D   +     +++L  +            A L       +  +
Sbjct: 181 DQLDE------------DSQRRLKTNPLRVLDTKHPE-------TQAVLVD--APKLADY 219

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +       L   +                               I+  +VRGL+YY+
Sbjct: 220 LDDESRVHFEGLKARLDAA-----------------------GIPYVINPKLVRGLDYYS 256

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +          +    G+V  GGRYDGLV +  G+     GF++GI RL++ L+
Sbjct: 257 KTVFEWVT--------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGVGFAMGIERLVLLLE 308

Query: 364 SLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +LE     I     V +       +  +L+  +     L T  +R ++  G+  +F +Q 
Sbjct: 309 TLEQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDQLPT--LRLQVNAGAG-SFKSQF 365

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQ 473
           K AD+     A+I G  E +  ++ +K L  +G++ +           + V Q
Sbjct: 366 KKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEHLASCVVQ 418


>gi|257126611|ref|YP_003164725.1| histidyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257050550|gb|ACV39734.1| histidyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 417

 Score =  222 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 94/472 (19%), Positives = 187/472 (39%), Gaps = 62/472 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
             + +G  D  + +++  + I+D+ ++++E YGF+ I TP+LE ++   + +  + D  +
Sbjct: 2   ISVLKGMKDRYSDDVKKYDLIVDTAKSVFEKYGFERIITPILEETELFRRGVGDETDVVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D   + +++R + TA + R   E       P  + +  GP++R E    GRFR
Sbjct: 62  KEMYEFVDKGNRNVTMRPEGTAGVVRAYLEAGFHKSSPIVKWFYHGPMYRYEAPQKGRFR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKI 182
           +F Q  ++  G  +   DAE+  M  + LE +GI       +    I +RK     L+  
Sbjct: 122 EFHQMGIEMFGVRSAYLDAEIIRMGCEFLEKLGITGLVVEINSLGNIESRKKYIDDLKAF 181

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                DKL++        D   ++    ++ L  + + D                  +  
Sbjct: 182 MEKRLDKLSD--------DSKRRYTTNPLRALDSKDKGDQEQFI---------NAPKLYD 224

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L  + +         ++                         +    ++  +VRGL+YY
Sbjct: 225 YLDEESKNYFENTKRYLE-----------------------LMNINYVVNDKLVRGLDYY 261

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E         +  K     +V  GGRYD L+       VP  GF+ G+ R+ + +
Sbjct: 262 SDTVFEI--------KSNKLGSQATVLAGGRYDRLLEILGNAKVPGIGFAAGMERIAMLM 313

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +    K    + +   D   +         + LR  GI+      + K+FG Q+K
Sbjct: 314 DENLIAKKENK----IYVIYFDETKEYF---VKIVEELRKNGIKVNFDY-NPKSFGAQMK 365

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+R N    +I G  E+   ++ +K  + G++     +      E +  + 
Sbjct: 366 KANRENADYVLILGEDEQKENVITMKKFSTGEQEKYSFEQVLKHFERKSLEK 417


>gi|217034105|ref|ZP_03439526.1| hypothetical protein HP9810_893g52 [Helicobacter pylori 98-10]
 gi|216943500|gb|EEC22954.1| hypothetical protein HP9810_893g52 [Helicobacter pylori 98-10]
          Length = 442

 Score =  222 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 135/455 (29%), Positives = 218/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY++ L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLSKVSVVFQSFGFVPIETPHLEYAEVLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ I IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCISINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +             +L    I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKKE-----------CDLDLNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNSMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ R      + G  E     L +K++  G +L
Sbjct: 389 SYANHRGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|162447682|ref|YP_001620814.1| histidyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189082283|sp|A9NGF8|SYH_ACHLI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|161985789|gb|ABX81438.1| histidyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 420

 Score =  222 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 101/484 (20%), Positives = 198/484 (40%), Gaps = 65/484 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D    E      +   +R +++ Y +  I TP++EYS+ + +     D  
Sbjct: 1   MNYIKVKGTYDVLPTEAENWVALESYVRKLFKTYNYGEIRTPMMEYSNVIHRETELSDMV 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRF 125
            K  ++ +D   + ++LR + TA + R   EN         + Y +GP FR E+   GRF
Sbjct: 61  IKETYNFKDKSDRDLTLRPEGTAGVIRSYVENKLYAQAGVTKLYYMGPNFRYERPQKGRF 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF+Q   + +GS+  + DAE+  +  +T+  +G+K+    +             +  + 
Sbjct: 121 RQFMQFGCEVLGSNEPSIDAEVIELAYETIYRLGLKQVSVKLNSLGDDASKANYRQALID 180

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               + ++L    + D  D+     +++L  +   D   +  K A L        + +L+
Sbjct: 181 FLTPVKDKL----SKDSQDRLTHNPLRILDSKDTAD--IELIKNAPLP-------LDYLN 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              ++    + EL+                          +   +I   +VRGL+YY   
Sbjct: 228 ETSKQHFDSVLELL-----------------------NLMNIPYEIDRKLVRGLDYYAHT 264

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E                  ++GGGGRY  LV    G + P  G++ G+ RL+ AL+  
Sbjct: 265 VFEIHATIKGF------GAQNALGGGGRYQNLVKELGGPDTPGIGYAFGMERLLSALEQE 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +  + K++    +  +  D  S  K      +LR+  I +++    ++ F  QLK A 
Sbjct: 319 GITLTSPKQLD---VYFITFDQQSRKKAIQLQHILRSENILSDIDH-LNRGFKPQLKEAL 374

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           R +    II G  E +  ++Q+K+    +++                   + +  L+ T+
Sbjct: 375 RYDSKFIIIIGENELNNNVVQLKNTKTEEQV------------------EVSMDTLLDTL 416

Query: 486 KKIL 489
           K++L
Sbjct: 417 KELL 420


>gi|42782401|ref|NP_979648.1| histidyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|54039677|sp|P62367|SYH1_BACC1 RecName: Full=Histidyl-tRNA synthetase 1; AltName:
           Full=Histidine--tRNA ligase 1; Short=HisRS 1
 gi|42738326|gb|AAS42256.1| histidyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 436

 Score =  222 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 132/475 (27%), Positives = 216/475 (45%), Gaps = 42/475 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRNLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILESINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 ER----TSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           A++ N P  +I G  E S   + ++++ +G E+   + + +         I I +
Sbjct: 382 ANKENIPYVLIIGEDELSTETVVLRNMKEGSEVKVPLSSLKDNTFNNYCNIPIKL 436


>gi|320450609|ref|YP_004202705.1| histidyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150778|gb|ADW22156.1| histidyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 418

 Score =  222 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 108/466 (23%), Positives = 196/466 (42%), Gaps = 57/466 (12%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPNKGVF 71
           RG  D   KE+R+   I+ + R + E  G   + TP+ E +    K +    D   K +F
Sbjct: 4   RGTKDLFGKELRLHQHIVATARRVLEAAGALELITPVFEETQVFEKGVGISTDIVRKEMF 63

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + QD  G+ ++LR + TA + R   E+       P R +  GP+FR E+   GR+RQF Q
Sbjct: 64  TFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQ 123

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKIGLHG 186
            + + +GS +   DAE  +++ ++L+ +G++    +        +R   +  L ++    
Sbjct: 124 VNYEALGSESPILDAEAVVLLYESLKELGLRRLTVKLSSVGDPKDRARYNAYLREVLSPH 183

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            + L++        D  ++  L  +++L  +   D        A L    I  M+ FL  
Sbjct: 184 REALSQ--------DSQERLELNPMRILDSKSEQDQ-------ALLKELNIRPMLDFLGE 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + +  +  +   ++                         S   ++  T+VRGL+YY    
Sbjct: 229 EAKAHLKAVERHLE-----------------------RLSVPYELDPTLVRGLDYYVRTA 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E            +     ++GGGGRYDGL     G  VP  GF+ G+ R+ +AL++  
Sbjct: 266 FEV--------HHAEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEG 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                 K      +  +    +++++     + LR   IRAE  L S K  G  ++ A +
Sbjct: 318 FGLPEEKGPD---VYLIPLTEEAVAETFYLAEALRPR-IRAEYAL-SPKKPGKGVEEALK 372

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           RN       G  E   G + +K LA G+++         +  + +A
Sbjct: 373 RNAAFVGFLGEDELKTGEVTLKRLATGEQVRLPQTEALGFLLSALA 418


>gi|308809683|ref|XP_003082151.1| histidyl-tRNA synthetase, putative (ISS) [Ostreococcus tauri]
 gi|116060618|emb|CAL55954.1| histidyl-tRNA synthetase, putative (ISS) [Ostreococcus tauri]
          Length = 518

 Score =  222 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 113/481 (23%), Positives = 202/481 (41%), Gaps = 47/481 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  D   +E R++  + +  R      GF+  + P+LE  +   +   +E      +++
Sbjct: 69  SGTRDWYPEEFRLQRWLFEKFRQTATRTGFEEYDAPVLERQELYKRKAGEE--ITSQMYA 126

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             D DG  ++LR ++T  LAR V     +++ P + + I   +R E    GR R+  Q +
Sbjct: 127 FVDQDGVDVTLRPEMTPTLARMVLGRAASMMLPLKWFSIPQCWRFETTQRGRKREHYQWN 186

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +D +G  + +A+ E+   + +   ++GI   D  I +N+RK++  +L+  G+  +    +
Sbjct: 187 MDIIGCKSISAETELLYAVCEFFRSIGITSADVGIKVNSRKVMASVLDSYGITAE----K 242

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V   +DKLDK G + V   L   +           NL  E  + +V+ L+      +
Sbjct: 243 FAPVCVIMDKLDKIGDEAVIEELVNAQ-----------NLPKETAEKIVACLACKNVDEL 291

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                 + G    + G  EL  +  L    G+  + +   +++VRGL YYTG V+E    
Sbjct: 292 AA----LCGEGVDQTGIEELKRLFSLADDYGFG-DWLIFDASVVRGLAYYTGIVFEGF-- 344

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALKSLESSTNN 371
                   +     ++ GGGRYD L+S +     VPA GF  G   ++  LK        
Sbjct: 345 -------DRAGELRAICGGGRYDKLLSLYGAMSEVPACGFGFGDCVIVELLKEKGLVPVL 397

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
            K    +       +     K      ++R+ G   +M L   K   N   YA+R     
Sbjct: 398 PKS---IEFVVAAFNEGMQGKAMKAAALIRSGGADVDMLLEPKKKVANTFDYANRIGARY 454

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            +     E   GM++IKDL             E   +    Q+ + +S+L   V ++L+E
Sbjct: 455 IVFVAPQEWENGMVRIKDLR-----------AEYTDKEDEKQLDVKLSDL-GRVSELLRE 502

Query: 492 N 492
           +
Sbjct: 503 H 503


>gi|328948006|ref|YP_004365343.1| histidyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448330|gb|AEB14046.1| Histidyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 433

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 132/464 (28%), Positives = 230/464 (49%), Gaps = 36/464 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ ++ +GF D   ++  +R+ +++ +   + +YGF PI+TP+LEY++ L +    E   
Sbjct: 5   IQPKILKGFRDFLPQDEILRSDLIEKLTKTFRSYGFVPIDTPVLEYTEILLRKSNGE--T 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +F  +D+ G+ +++R+DLT P AR+ A++ + + FP + Y I  V+R EK   GR+R
Sbjct: 63  EKQMFRFEDNGGRDVAMRFDLTVPFARFTAQHKEELYFPFKRYHISKVWRGEKPQVGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+QCD D VGS +  +D E   +M   L A+G+  ++  I +N+R I +  L+K+GL  
Sbjct: 123 EFVQCDFDTVGSDSAVSDFETLSLMKAALSAIGV--DEIKIHVNHRGIFNRFLKKLGLSE 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +      +LRA+DK+ K G + V   L E         T  A+ +++ ID +      
Sbjct: 181 KSE-----DILRAVDKIAKVGEEKVSAELEE--------ITGNADSSAKIIDYIKPL--S 225

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             E+++  + EL  G    ++    +  I  +++ +G       +   I RGL+YYTG V
Sbjct: 226 SFEETLSHIEELAGG---EDEDSKRMKTIFSMMKAAGI-EGTYMLDPAITRGLDYYTGIV 281

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           YE  L        +K    GSV  GGRYD L   +  + +P  G SIG+ RLI  L  L 
Sbjct: 282 YETFL--------EKLPSIGSVCSGGRYDNLAGLYMKEKLPGVGSSIGLDRLIAGLSELG 333

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  +   + +   + D +   +YQ     LR  GI  E+F  + K    Q    D+
Sbjct: 334 I---TNAKGSYLDVEIFNTDENLNVQYQEVAAKLRKEGISVEVFPDTVK-INKQYSVTDK 389

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGK-ELSREIKNNESWREA 469
           +  P  I+  +   +   + +K+L   +   S  I++  S  + 
Sbjct: 390 KQIPWGIMLSSNSETANTITLKNLKTREIFESISIEDAASKIKD 433


>gi|229145901|ref|ZP_04274280.1| Histidyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST24]
 gi|296503833|ref|YP_003665533.1| histidyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228637509|gb|EEK93960.1| Histidyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST24]
 gi|296324885|gb|ADH07813.1| histidyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 426

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 129/464 (27%), Positives = 214/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   +  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNLRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GILE I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILESINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 280 YEIFLKDRSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 332 KE----TISSTADLFIIPLGTE----LQCLPIAQQLRSTTSLKVELEL-AGRKLKRALNY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   I +  ++ 
Sbjct: 383 ANKENIPYVLIIGENELSTNTVVLRNMKEGSEVKVPISSLSNYL 426


>gi|308062471|gb|ADO04359.1| histidyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 442

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 134/455 (29%), Positives = 218/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY++ L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLSKVSVVFQSFGFVPIETPHLEYAEVLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ I IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIVASLKALDL--EDFCISINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +             +L    I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKKE-----------CDLDLNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKGYNENLKKGIQDLEKLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNGMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|228909131|ref|ZP_04072959.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 200]
 gi|228850452|gb|EEM95278.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 200]
          Length = 436

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 129/462 (27%), Positives = 215/462 (46%), Gaps = 42/462 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRTCEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLKDQGKRELTLRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EITIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+    +    T     G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLSIDNFKDAF-NTPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN--VPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++  F+  N   P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRCDNISYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++ N P  +I G  E S   + ++++ +G E+   + + ++
Sbjct: 382 ANKENIPYVLIIGEEELSTETVMLRNMKEGSEVKVPLSSLKN 423


>gi|317180919|dbj|BAJ58705.1| histidyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 442

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 135/455 (29%), Positives = 218/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY++ L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAEVLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ I IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIVQVIVASLKALDL--EDFCISINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +             +L    I  ++  + I
Sbjct: 177 -----QVNEALRIMDKLEKIGLNGVEEELKKE-----------CDLDLNTIKKLLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNEMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ R      + G  E     L +K++  G +L
Sbjct: 389 SYANHRGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|254468986|ref|ZP_05082392.1| histidyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087796|gb|EDZ65079.1| histidyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 421

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 104/472 (22%), Positives = 192/472 (40%), Gaps = 60/472 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  +GF D   ++ +      ++   + + + +D I+ P++E +D     + +  D  
Sbjct: 3   KYQSIKGFYDVLPEKQKYWRFFYETAYQVLDRFAYDEIKLPIVENTDLYIHSVGEQTDIV 62

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S QD+ +   ++LR + TA   R V EN  T   P R +  GP+FR+E    GR 
Sbjct: 63  EKEMYSWQDNLNNDKLTLRPEGTAGCVRAVIENNLTYNGPIRLFYQGPMFRHENVQKGRQ 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGILEK 181
           RQF Q  ++  G S    DAE+  ++    + +G+K      +       R +    L K
Sbjct: 123 RQFNQLGIEAFGFSEPLLDAEVICLLDSLWKNLGLKNIELQINNIGDPEERAVYRQELIK 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        D   +     +++L  +              L  ++    +
Sbjct: 183 YFESHQDELDE--------DAKRRLYTNPMRILDSKNPKMQ--------GLI-DKAPKFL 225

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
              S +  K   ++ + +  +    K    L                       VRGL+Y
Sbjct: 226 DQNSAESAKHFEQVTQYLDQSNIAYKINKNL-----------------------VRGLDY 262

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +               G++ GGGR+D L+    G+ +PA G  IGI R+I+ 
Sbjct: 263 YNRTVFEFVTSD--------LGSQGTIAGGGRFDYLIQSINGKEIPAFGVGIGIERIILL 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+ L +S+ +IK      +  +    +  +     +  LR + I   M +G + +F +Q+
Sbjct: 315 LEELNNSSFDIKPQ----VYVLSLGENVDNYAFNISNQLRNSNISVCMNVGKN-SFKSQM 369

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARVA 472
           K AD+     AII G  E +   +QIK L +   +     K+   +     +
Sbjct: 370 KKADKSGAQFAIIIGDNEVNNDSVQIKLLRQELSQEEINKKDIVHFITQHAS 421


>gi|222474830|ref|YP_002563245.1| histidyl tRNA synthetase (hisS) [Anaplasma marginale str. Florida]
 gi|254994688|ref|ZP_05276878.1| histidyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
 gi|255002804|ref|ZP_05277768.1| histidyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|255003936|ref|ZP_05278737.1| histidyl-tRNA synthetase [Anaplasma marginale str. Virginia]
 gi|254782305|sp|B9KHM7|SYH_ANAMF RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|222418966|gb|ACM48989.1| histidyl tRNA synthetase (hisS) [Anaplasma marginale str. Florida]
          Length = 430

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 114/463 (24%), Positives = 184/463 (39%), Gaps = 56/463 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   +E      I D   +I E YGF P+ETP+ E+ D   K L D  D  
Sbjct: 5   KLQPVRGTRDLLPEECYKFWHIRDVAHDIGERYGFVPVETPIFEFQDVFLKTLGDSSDII 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S  D  G  + LR +LTA +AR +     T+    R +  GPVFR E+    R R
Sbjct: 65  GKEMYSFPDRGGDVLVLRPELTAAVARMLICERLTLP--ARLFTFGPVFRYERPQKCRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + ++ G +  TADAE+  +  D L A+ ++  +  + IN+    D +LE      
Sbjct: 123 QFHQINYEHFG-AGCTADAELMALAYDILGALNLRS-EVQLEINSLGNQDSVLEYRNSLL 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K  E+     + D   +     +++L  + R D       GA +       +  F   
Sbjct: 181 --KYFEKHEHALSEDSRRRLQTNPLRILDSKDRGD--IAILCGAPV-------IADFYDD 229

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + + + + + + +                               ++  +VRGL+YY G V
Sbjct: 230 ESKMTFNGVMQQLDNL-----------------------GIPYTVNPRLVRGLDYYCGTV 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E                  +V  GGRYD LV+   G +VPA GF+ G+ RL        
Sbjct: 267 FEFKTTS--------LGSQDAVIAGGRYDKLVASMGGGDVPAVGFAGGVERLASL----- 313

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        +  +    ++          LR  GIR     G  +     LK+ADR
Sbjct: 314 ---AAYSHSTRFSVAFLPLGEEAARCAMRSAYELRGRGIRVLCD-GVVEKLKIGLKHADR 369

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               LA+I G  E ++G +  + +  G + +  I N   +   
Sbjct: 370 SGVDLALILGDEEIAKGEVLCRHMDTGLQQTVSISNLGDYVSG 412


>gi|47564460|ref|ZP_00235505.1| histidyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47558612|gb|EAL16935.1| histidyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 425

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 131/464 (28%), Positives = 215/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEIRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMCMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  +    T     G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLSIDDFKDAF-STPLVTDGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDDSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   I +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEELSTDTVVLRNMKEGSEVKVPISSINNYL 425


>gi|188527977|ref|YP_001910664.1| histidyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|229558687|sp|B2UUV2|SYH_HELPS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|188144217|gb|ACD48634.1| histidyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|308063972|gb|ADO05859.1| histidyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 442

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 134/455 (29%), Positives = 218/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY++ L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLSKVSVVFQSFGFVPIETPHLEYAEVLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ I IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIVASLKALDL--EDFCISINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +             +L    I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKKE-----------CDLDLNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNGMK--------SLGSVCSGGRYDHLTQNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|89898735|ref|YP_515845.1| histidyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123735901|sp|Q252T8|SYH_CHLFF RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|89332107|dbj|BAE81700.1| histidyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 430

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 108/468 (23%), Positives = 187/468 (39%), Gaps = 58/468 (12%)

Query: 7   LRAELPRGFADCPT---------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           ++  LP+G  D            +   + +R+ D I  + + YGF  + TP+ E S+   
Sbjct: 1   MKVALPKGVFDIFPYITDAKHMWRHTSLWHRVEDVIHEVCDLYGFSEVRTPVFEKSEVFL 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
                 D   K +++  D  G+ ++LR + TAP+ R   +N        + Y I P+FR 
Sbjct: 61  HAGEQSDIVKKEMYTFLDKKGRSLTLRPEGTAPIVRSFIDNSMNQRDDNKFYYILPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q  ++ +G      DAE+  ++ +   AVG++     +          
Sbjct: 121 ERQQSGRYRQHHQFGLEAIGVRHPLRDAEVLSLLWNFYSAVGLQGMQIQLNFLGGGTTRQ 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             +K+      +  E L  L      ++F    +++L  +   D             +  
Sbjct: 181 RYDKVLREYFLEHFESLSSLS----KERFNTNLLRILDSKETEDQE---------IIKSA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ ++S + +K   E+   +           +L                       VR
Sbjct: 228 PSILEYISDEDQKYFDEILTALNSLDIPHSINPKL-----------------------VR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYT  V+EAI  F   +          +GGGGRYDGLV+   G + PA GF +G+ R
Sbjct: 265 GLDYYTDVVFEAITTFGGHSYA--------LGGGGRYDGLVAASGGPSTPACGFGVGLER 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           ++  L +  + T          +  +  +S + S   ++ Q LR  GI  E+   + K  
Sbjct: 317 VMQTLLAQGNITLPSS----HKLRLIPVESQADSFCFIWAQHLRGLGIPTEIDW-THKKL 371

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            N LK AD        + G  E     L IKD++  +E S   +  E 
Sbjct: 372 KNALKTADAEKATFVCLVGERELLSEQLTIKDMSSRQEFSGSKQEVEQ 419


>gi|15645804|ref|NP_207981.1| histidyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024676|sp|P56455|SYH_HELPY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|2314351|gb|AAD08236.1| histidyl-tRNA synthetase (hisS) [Helicobacter pylori 26695]
          Length = 442

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 134/455 (29%), Positives = 218/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+ +L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAQTLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIVASLKALDL--EDFCVSINHRKILNGICEYFGIS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +              L S  I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKKE-----------CGLNSNTIKELLELIQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNEMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|323302548|gb|EGA56355.1| Hts1p [Saccharomyces cerevisiae FostersB]
          Length = 526

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 136/526 (25%), Positives = 229/526 (43%), Gaps = 71/526 (13%)

Query: 3   KKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           KK KL+   + P+G  D    ++ IR  I  ++  +++ +G   I+TP+ E  + L    
Sbjct: 27  KKGKLQVSLKTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKY 86

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K +++L+D  G+  SLRYDLT P ARYVA N    +   + Y I  V+R ++ 
Sbjct: 87  GED---SKLIYNLEDQGGELCSLRYDLTVPFARYVAMNN---IQSIKRYHIAKVYRRDQP 140

Query: 121 --GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
               GR R+F QCD D      +   D+E   ++ + L ++GIK  D+ I +N+RKILDG
Sbjct: 141 AMTKGRMREFYQCDFDVAGTFESMVPDSECLSILVEGLTSLGIK--DFKIKLNHRKILDG 198

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I +  G+  +D       +  A+DKLDK   + VK  + E               + E  
Sbjct: 199 IFQIAGVKDED----VRKISSAVDKLDKSPWEAVKKEMTEE-----------KGQSEETA 243

Query: 238 DIMVSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           D +  ++ ++       ++      +      ++G +++  + +       +S  I    
Sbjct: 244 DKIGEYVKLNGSLKEIHAVLSADANITSNEKAKQGLDDIATLMKYTEAFDIDS-FISFDL 302

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKP--------------VVFGSVGGGGRYDGLVS 339
           ++ RGL+YYTG +YE +       E                  V  GS+  GGRYD LV+
Sbjct: 303 SLARGLDYYTGLIYEVVTSASAPPENASELKKKAKSAEDASEFVGVGSIAAGGRYDNLVN 362

Query: 340 RFKG------QNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---S 389
            F          +P  G S G+ R+   +K    SST        V +       D    
Sbjct: 363 MFSEASGKKSTQIPCVGISFGVERIFSLIKQRINSSTTIKPTATQVFVMAFGGGKDWTGY 422

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +    T+ L  AGI AE    +  N   Q   A++  C +A+I G  E   G L++K 
Sbjct: 423 LPERMKVTKQLWDAGIEAEYVYKAKANPRKQFDAAEKAGCHIAVILGKEEYLEGKLRVKR 482

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           L  G+E + +                +  +++V  V+  L +  E+
Sbjct: 483 L--GQEFADDDGEL------------VSAADIVPIVQGKLSQIHED 514


>gi|218295027|ref|ZP_03495863.1| histidyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244230|gb|EED10755.1| histidyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 418

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 113/466 (24%), Positives = 197/466 (42%), Gaps = 57/466 (12%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           RG  D   +E+R+  RI+++ R + E  G   + TP+ E +    K +    D   K +F
Sbjct: 4   RGTKDLFGRELRLHQRIVETARRVLEAAGALELITPIFEETQVFEKGVGAATDIVRKEMF 63

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + QD  G+ ++LR + TA + R   E+       P R +  GP+FR E+   GR+RQF Q
Sbjct: 64  TFQDRGGRSLTLRPEGTASMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQ 123

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKIGLHG 186
            + + +GS +   DAE  +++ D+L  +G++    +        +R   +  L ++    
Sbjct: 124 VNYEALGSESPVLDAEAIVLLYDSLRELGLRRLSVKLSSVGDPEDRARYNAYLREVLTPY 183

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            + L+E        D  ++  L  +++L  +   D        A L    +  ++ FL  
Sbjct: 184 KEALSE--------DSQERLVLNPMRILDSKSEKDQ-------ALLRELGVRPLLDFL-- 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                             GE     L  +   + + G      ++  T+VRGL+YY    
Sbjct: 227 ------------------GEAARAHLKAVERHLSRLGVP---YELEPTLVRGLDYYVRTA 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E           Q+     ++GGGGRYDGL     G  VP  GF+ G+ R+ +AL++  
Sbjct: 266 FEV--------HHQEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEG 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +    K     LI  +    +++ +     + LR   +R E  LG  K  G  L+ A +
Sbjct: 318 FALPEEKGPDLYLIPLL---EEAVDEAFYVAETLRPR-LRVEYALG-PKKPGKGLEEALK 372

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           R    A   G  E   G L +K LA G+++    +    +  +   
Sbjct: 373 RGAAFAGFLGEEELKAGELTLKRLATGEQVRLPYREVAGFLLSTPG 418


>gi|119873110|ref|YP_931117.1| histidyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|166228603|sp|A1RUZ2|SYH_PYRIL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|119674518|gb|ABL88774.1| histidyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 421

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 115/454 (25%), Positives = 210/454 (46%), Gaps = 46/454 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
             PRG  D    +      + +++  + E +G+  +ETP++E+ + L K    E      
Sbjct: 10  RPPRGMRDWLPPQFYALRHMEETLSKVAEAFGYRRVETPVVEHFEVLAKKAGQE--VVNE 67

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D  G+ + LR+D+T P+AR V     ++  P R Y    VFR ++   GR+R+F 
Sbjct: 68  IYYFKDKAGRDLGLRFDMTVPIAR-VISYNLSLPRPIRWYYFTKVFRYDEPQHGRYREFY 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++ +GS++  ADAE+  +    L+AVG +   Y + IN+R+++D +LE++G+     
Sbjct: 127 QFGIELIGSASPRADAEVLQVFTQALDAVGARS--YIVKINDRRVVDKLLERLGVSAYRD 184

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           +       RA+DK  K   + V  L+ EG             ++ +  + +         
Sbjct: 185 VIY-----RALDKKLKLSREEVIKLMAEG------------GVSLDTAERIYDIAEEMSI 227

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +    +   +   +     +N+L+   E    +  + ++ +   +IVRGL+YYTG V+EA
Sbjct: 228 EEAVNVITKLDSGLGS--FYNKLLKYLE----AAVSLDKFRFDMSIVRGLDYYTGMVFEA 281

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
             G   +          +VGGGGRYD L+  + G  +PA GF+IG+ R    ++++    
Sbjct: 282 FAGEYKL----------AVGGGGRYDDLLELYSGVKMPALGFAIGVER---LMEAVGLEG 328

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   + I     D D+        + LR+AG    + LG  KN     +Y  +   
Sbjct: 329 VEKPLDYYIYIF----DDDAYPYAVAIAKRLRSAGYSVVVELGE-KNLKEVFEYILKIGT 383

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              II G  E  +G+++I+DL + +E  +     
Sbjct: 384 RYLIIIGKKELEKGVVKIRDLQRREEFEKPFSEF 417


>gi|308183296|ref|YP_003927423.1| histidyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065481|gb|ADO07373.1| histidyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 442

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 134/455 (29%), Positives = 219/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY++ L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAEVLLPNANSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIVASLKALDL--EDFCVSINHRKILNGICEYFGIS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL-- 244
                +   VLR +DKL+K GL GV+  L +             +L S  I  ++  +  
Sbjct: 177 -----QVNEVLRIVDKLEKIGLNGVEEELKKE-----------CDLDSNTIKELLEMVQI 220

Query: 245 ---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
               +   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 QQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNDMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      I G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAIIGEEEFKSETLSLKNMHSGMQL 423


>gi|294930639|ref|XP_002779630.1| histidyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239889038|gb|EER11425.1| histidyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 485

 Score =  221 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 109/489 (22%), Positives = 192/489 (39%), Gaps = 55/489 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D   +++R+RN +    R++   YGF   + P+LE  D   +   +E   
Sbjct: 51  ISFDPPSGTRDFFPEDMRVRNWLFAQWRSVSTQYGFSEYDAPVLENEDLYKRKAGEEIV- 109

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +++  D +   ++LR ++T  LAR V     + V P + + I   +R E    GR R
Sbjct: 110 -EQMYNFVDKEDHRVTLRPEMTPTLARMV----LSRVLPLKWFSIPQCWRFETTQRGRKR 164

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q + D VG +  TA+ E+   M    + VG+   D  I +N+R IL  +L+  G+  
Sbjct: 165 EHYQWNCDIVGVADITAELELLATMVGFFKRVGLTSADVGIKVNSRAILQSVLKASGVGA 224

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D+       V   +DK+DK G + V   + E              L     + +V   + 
Sbjct: 225 DE----FAKVCVVVDKIDKVGREEVIRQMVEDIK-----------LDVAVAERVVDATAA 269

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              +    +        +  +  +++  + +     G  ++ +   +++VRGL YYTG V
Sbjct: 270 GSIEEFKAIAG-----ESCAEDVDDVERLFQFAENYGI-ADWLVFDASVVRGLAYYTGIV 323

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALKSL 365
           +EA           +     ++ GGGRYD L+S +     +P  GF  G   +   L   
Sbjct: 324 WEAF---------DRRGELRAIAGGGRYDRLLSLYGAPSEIPCVGFGFGDCVIYELLLER 374

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                    +       +        +       LR+ G   ++ L + K    Q +YAD
Sbjct: 375 GLLPEIPHRVD----FVVAAYKGMYGQALEVAAGLRSGGATVDVMLEAGKRVDKQFRYAD 430

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           R            E   G ++IKDL  G                   QI IP+ +L +  
Sbjct: 431 RVGADKIAFVAPSEWESGKVRIKDLRTGD-------------SEARVQIDIPVCDLANA- 476

Query: 486 KKILQENKE 494
           K    +  E
Sbjct: 477 KSYFDKQAE 485


>gi|308233928|ref|ZP_07664665.1| histidyl-tRNA synthetase [Atopobium vaginae DSM 15829]
          Length = 436

 Score =  221 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 102/481 (21%), Positives = 175/481 (36%), Gaps = 66/481 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
           A+  +G  D     +R  N  L     ++  + FD IETP LE  D+    + +  D   
Sbjct: 2   AQRIQGTEDLYGDNMRAWNFALTCAAELFNTHAFDMIETPALEQVDTFVHGIGESSDVVR 61

Query: 68  KGVFS----------LQDDDGQWI------SLRYDLTAPLARYVAENFD--TIVFPCRTY 109
           K +F           L     Q +      +LR + TA + R V E+        P + +
Sbjct: 62  KEMFRVFSGALLENLLSSQSEQHLKPKQRMALRPEGTAGVVRAVVEHNLIPQGASPLKVW 121

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
               +FR E+   GR RQF Q   + +G+    ADAE  MM+ +    +G + N   + I
Sbjct: 122 YGEAMFRGERPQKGRLRQFHQIGCEWLGADDPCADAECIMMLMEFYTRMGFEPNQLVLHI 181

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           N+    D               +        D L++  +  ++    + + ++  +    
Sbjct: 182 NSMG--DQACRPAYRESVRAFIKDHQDQMCPDCLERATINPLRAF--DCKNEHCHEIMSD 237

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L  +        L  + +     +   +                              
Sbjct: 238 APLAKDN-------LCAECKTHYERVKAFLDEAHVA-----------------------Y 267

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
               T+VRGL+YYT  V+E                 GS+GGGGRYDGLV    G+     
Sbjct: 268 VEDPTLVRGLDYYTRTVFEIECPQA---------HVGSIGGGGRYDGLVELEGGRPTCGL 318

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G+++G  R+I+AL++  +         P  +                   LR AGIR E 
Sbjct: 319 GWALGFERMILALQTFGTQPWKT---TPACVYVAFTSDAERMYAFNVCAQLRQAGIRTES 375

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                ++  +Q K AD+    L ++ G  E     + ++D+   ++   ++ N  S   A
Sbjct: 376 NY-QGRSLKSQFKQADKLGARLCVVIGEHETQNQSVTVRDMQTHEQTEIQLTNLVSQLTA 434

Query: 470 R 470
           +
Sbjct: 435 K 435


>gi|297181088|gb|ADI17287.1| histidyl-tRNA synthetase [uncultured alpha proteobacterium
           HF0070_17D04]
          Length = 463

 Score =  221 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 104/472 (22%), Positives = 172/472 (36%), Gaps = 64/472 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           R +  RG  D     +    R++ + R     YGF  + TP+ E+++   + L D  D  
Sbjct: 46  RLQPARGTTDLMPAAMAGHQRVIGTARAAAGLYGFQEMATPMFEFAEVFSRPLGDSSDVV 105

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K  ++  D  G+ ++LR + TA + R +  N  T   P + +  GP+FR E+   GR R
Sbjct: 106 TKETYNFTDRGGETLTLRPENTAGVVRAMISNGLTQSLPLKFFYAGPMFRYERPQKGRMR 165

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG-----IKRNDYHIGINNRKILDGILEK 181
           QF Q  ++ +G     ADAE+    A  L+ +G       R +      +R+     L  
Sbjct: 166 QFHQIGIEYLGPRDGLADAEIIGCGARILDDLGVLDLCTLRLNSLGDSESRQAYRAALID 225

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                +  L+E        D   +     +++L  +   D +            +   + 
Sbjct: 226 FLNAHEADLSE--------DSRTRLTSNPLRILDSKDAGDRA---------IIAEAPRLD 268

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           +FL+    +    +   + G                                 +VRGL+Y
Sbjct: 269 AFLNDGSRRHFDSVTGALDGA-----------------------GISWSFDPLLVRGLDY 305

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E I               G+V GGGRYDGL     G  VP  G++ G+      
Sbjct: 306 YCHTAFEFIT--------DALGAQGTVLGGGRYDGLSEMLGGPPVPGVGWAAGV------ 351

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +      E     +  M  D D+        + LR AGI     L +    G +L
Sbjct: 352 --ERLAMLVGNVEPAAPRVAVMPMDGDAEGAAFALAESLRGAGIAV--DLPAGGAIGKRL 407

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K  DR    +A+I G+ E +    QI+DL  G +         S     + +
Sbjct: 408 KKVDRAGVRIAVILGSDEVAGSSAQIRDLGAGTQQEVPQAELASVLHGMLGE 459


>gi|229179608|ref|ZP_04306959.1| Histidyl-tRNA synthetase 1 [Bacillus cereus 172560W]
 gi|228603811|gb|EEK61281.1| Histidyl-tRNA synthetase 1 [Bacillus cereus 172560W]
          Length = 425

 Score =  221 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 130/464 (28%), Positives = 214/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A++VA N   +  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRELALRYDLTIPFAKFVAMN-PNLRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  D    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFDLFRTLNL---EITIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTNDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLTIADFKEAF-NNQLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDSMNYPTVGISFGLDVIYAALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   I +  S+ 
Sbjct: 382 ANKENIPYVLIVGEEELSTNTVVLRNMKEGSEMKVPISSLSSYL 425


>gi|320527501|ref|ZP_08028681.1| histidyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132058|gb|EFW24608.1| histidyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 450

 Score =  221 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 93/470 (19%), Positives = 169/470 (35%), Gaps = 58/470 (12%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            ++  +  + PRG  D    E+   +   + IR   + Y +  I TP  E +    +   
Sbjct: 25  KEERTMSYQTPRGTYDILPDEMNRWHHTEEVIRETTKRYRYREIRTPYFEETKVFKREND 84

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEK 119
             D  NK +++  D      +LR + TA + R   ++            Y +G +FR+E 
Sbjct: 85  SSDMVNKEMYTF-DMGTHSYTLRPEGTAGVIRAFDQHKLYGSMEMPGRFYYLGAMFRHEN 143

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKIL 175
              GR RQF Q  ++N+G+ +   DAE   +  D ++ +GI      I       +R   
Sbjct: 144 PQKGRQRQFTQFGIENIGAKSPELDAETIALGYDIVKQMGISSIKVCINTLGDDASRAAY 203

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
              L++      ++L          D   ++    +++L  +   D              
Sbjct: 204 RTALKEYFQPHLEEL--------CGDCHRRYEQNPLRILDCKVDHDKECVH--------- 246

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
               +  +L+ + +   + +   +       +  + L                       
Sbjct: 247 AAPKLADYLNEESKNYFNRVLACLDALEIPYEVDDHL----------------------- 283

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YYT  V+E +   P            ++  GGRYD  V  + G  +   GF+IG+
Sbjct: 284 VRGLDYYTHTVFEVVSTRP------DSGAQATIFAGGRYDHFVEYYGGPEMSGIGFAIGM 337

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RLI           +       +I   D  +  L       Q LR AG  AE  L   +
Sbjct: 338 ERLINLAAEEGHDFGDENSCDVYVIGLGDVGASVLKT----VQQLRHAGYSAEANLVQ-R 392

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +   Q K  DR +    +I G  E     + IK+++   ++  + +    
Sbjct: 393 SLKAQFKSVDRNHARYVVILGEDEVKNNTMNIKNISDKSQVIIKQEELLE 442


>gi|210632315|ref|ZP_03297282.1| hypothetical protein COLSTE_01176 [Collinsella stercoris DSM 13279]
 gi|210159631|gb|EEA90602.1| hypothetical protein COLSTE_01176 [Collinsella stercoris DSM 13279]
          Length = 438

 Score =  221 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 101/481 (20%), Positives = 178/481 (37%), Gaps = 72/481 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           ++A+   G  D   +++R   R+    +  +E YGFD IETP +E  D     +    D 
Sbjct: 1   MQAQKAEGTKDLIGRDMRAWQRMQRIAQETFEPYGFDAIETPAIEQLDVFVHGIGQSTDV 60

Query: 66  PNKGVFSL-------------QD---DDGQWISLRYDLTAPLARYVAENFD--TIVFPCR 107
             K +F +              D      Q ++LR + TA + R V EN        P +
Sbjct: 61  VRKEMFRVFSGANFARVLEEGTDTKLKAKQRLALRPEGTAGVVRSVVENNLVPQGSTPFK 120

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH- 166
            +    +FR E+   GR RQF Q  ++ +G+    ADAE  +M+ +  + +G   +    
Sbjct: 121 AWYAEAMFRGERPQKGRLRQFHQVGIEWLGAPDPAADAECIIMLMELFKRLGFDLSKLRL 180

Query: 167 --IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
               + +        E +     D  NE     R     ++  L  ++    + +  +  
Sbjct: 181 LINSMGDPSCRPAYRETVRQFILDHANEMCDECR-----ERAELNPLRAF--DCKNPHCH 233

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
           +  +GA L       M   L  D  +   ++   +                         
Sbjct: 234 EVMQGAPL-------MRDCLCDDCREHYEQVKRYLDAA---------------------- 264

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
                    T+VRGL+YYT  V+E       +               GRYDGLV    G+
Sbjct: 265 -GIEYVEDPTLVRGLDYYTRTVFEVEAPGAGVGSIGGG---------GRYDGLVELEGGK 314

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             P  GF++G  R+ +AL++        +      +   +  +D   +    ++ LR  G
Sbjct: 315 PTPGVGFAVGFERIALALEAFGVELGGQEPS---CVFIANAGADLRGEVFALSRELRGLG 371

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           +R E      K+   Q K AD+      +I G  E + G ++++++    E   E  +  
Sbjct: 372 VRTECDY-QGKSLKAQFKQADKLGASHIVIIGGDELAAGKVKLRNMGTHDERLVERADAA 430

Query: 465 S 465
           S
Sbjct: 431 S 431


>gi|261838514|gb|ACX98280.1| histidyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 442

 Score =  221 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 135/455 (29%), Positives = 218/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY++ L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAMQKAQLLSKVSVVFQSFGFVPIETPHLEYAEVLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ I IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIVASLKALDL--EDFCISINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +             +L    I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKKE-----------CDLDLNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNGMK--------SLGSVCSGGRYDHLTQNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ R      + G  E     L +K++  G +L
Sbjct: 389 SYANHRGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|219852785|ref|YP_002467217.1| histidyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|254782336|sp|B8GDZ3|SYH_METPE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|219547044|gb|ACL17494.1| histidyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 409

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 99/452 (21%), Positives = 173/452 (38%), Gaps = 56/452 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           + PRG  D    E+  R  I   +R     +G+  + TP+ E                  
Sbjct: 3   QRPRGTRDFLPDEMEARRMIEGRMREAVRRWGYREVATPIFEDLSLFTMRSGQGIID--E 60

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  QD  G+ ++LR +LTA + R        +  P R       FR E+   GR+RQF 
Sbjct: 61  MYVFQDKGGRDLALRPELTAAVLRMYVNEARVLAKPLRWCYFADCFRYERPQKGRYRQFW 120

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+ +G+    ADAE+ ++  + + + G+  +     +       G+++ +     ++
Sbjct: 121 QFGVELIGADTAAADAEVILVADNAIRSSGLDYDLKIGHL-------GLMKHLLADVGEE 173

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           +                    V   L +   D   D+ + A L +   D +   L+ +  
Sbjct: 174 VRR-----------------KVMAYLDKKEFDGLKDYLETAGLAALT-DPLTRLLAAETL 215

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                +   +       +    L               R   +  I RGL+YYTG V+E 
Sbjct: 216 DEAFAVTGPLPEEGRIREMAALLDA----------TGVRYSYNFGIARGLDYYTGMVFEG 265

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                     +       + GGG Y  L   F G + P+ GF+IG  R++VAL  +++  
Sbjct: 266 F--------AKNLGAESQIVGGGAY-RLAQVFGGDDAPSVGFAIGFDRVMVALGEVQTRK 316

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                     I  +   ++            RTAGIRA++ L S +  G QL  A +   
Sbjct: 317 QK--------IVGVVSTAEGRPFAFRVANAFRTAGIRADLDL-SDRGLGAQLARAAKE-A 366

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             A++ G  E + G + +K+LA G + +  I 
Sbjct: 367 DFAVLIGEREVATGTVTLKNLATGTQTAVTID 398


>gi|307594682|ref|YP_003900999.1| histidyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307549883|gb|ADN49948.1| histidyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 433

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 116/455 (25%), Positives = 217/455 (47%), Gaps = 36/455 (7%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
               RG  D   +E     ++ D +  + E++G+  +ETP LE+ + L     ++     
Sbjct: 8   LRPVRGMKDLTPEEYYPMLQVFDKLARVAESFGYLRVETPALEHYEILKAKAGED--VIN 65

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ + LR+D+T P+AR V      +  P R Y I  V+R ++   GR+R+F
Sbjct: 66  EIYYFKDKAGREVGLRFDMTVPVAR-VVSYRVDVPKPIRWYYITKVWRYDEPQHGRYREF 124

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +GSS+  ADAE+  +  + L+A+     D+ + IN+R+I+D +L K+G+  + 
Sbjct: 125 HQFGIEFIGSSSVRADAEVLTVGVEALKALN--IGDFRVRINDRRIIDQLLSKLGISNEL 182

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           K      VLR +DK  K     +  +L +              L+++    ++     + 
Sbjct: 183 K----PSVLRVMDKRGKVPDDEILRMLRD------------LGLSNDTAQEVLRL--ANT 224

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  +  K     ++       + +L+   G   N + +   IVRGL+YYTG V+E
Sbjct: 225 SEGIDKAIDSFKEFGVSDEFIKYYSELIDLLDMYGVR-NYMDLDMGIVRGLDYYTGIVFE 283

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +    ++          VGGGGRYD L+  + G+ +PA+GF++GI RL+  L+   S 
Sbjct: 284 MYVPDYKLS----------VGGGGRYDNLIEIYSGKPMPASGFAMGIERLLEVLEQRGSI 333

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                ++    +  + +D + L+        LR  G +  +  G  K+  + L+YA + N
Sbjct: 334 KRAFPQID-YYVYVLGNDRNYLALGYRLAANLRARGNKVIVDTGE-KSLRSALEYASKVN 391

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               II G  E S+G+++++D++   E    I   
Sbjct: 392 VRYFIIVGPKEVSQGVVRVRDMSNWSERDVPITEF 426


>gi|229031003|ref|ZP_04187019.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH1271]
 gi|228730350|gb|EEL81314.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH1271]
          Length = 425

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 132/464 (28%), Positives = 218/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N  +I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRELALRYDLTIPFAKVVAMN-PSIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILESINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D++ + +  
Sbjct: 177 ER----TSDVILSLDKIEKIGINGVRKDVLER------------GISEEMADMICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E    T    +G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLTIADFKEAF-NTPLVAEGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LQCLQIVQQLRSTTSLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   + +  S+ 
Sbjct: 382 ANKENIPYVLIIGEEELSTETVMLRNMKEGSEVKVPLSSLNSYL 425


>gi|317178511|dbj|BAJ56299.1| histidyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 442

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 135/455 (29%), Positives = 218/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY++ L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAMQKAQLLAKVSVVFQSFGFVPIETPHLEYAEVLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ I IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCISINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +             +L    I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKKE-----------CDLKPNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNGMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ R      + G  E     L +K++  G +L
Sbjct: 389 SYANHRGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|308184938|ref|YP_003929071.1| histidyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060858|gb|ADO02754.1| histidyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 442

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 134/455 (29%), Positives = 219/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+ +L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLSKVSVVFQSFGFVPIETPHLEYAQTLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCVSINHRKILNGICEYFGIS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL-- 244
                +   VLR +DKL+K GL GV+  L +             +L S  I  ++  +  
Sbjct: 177 -----QVNEVLRIVDKLEKIGLNGVEEELKKE-----------CDLDSNTIKELLEMVQI 220

Query: 245 ---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
               +   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 QQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNDMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      I G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAIIGEEEFKSETLSLKNMHSGMQL 423


>gi|67480431|ref|XP_655565.1| histidyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56472715|gb|EAL50179.1| histidyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 506

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 125/469 (26%), Positives = 211/469 (44%), Gaps = 38/469 (8%)

Query: 2   GKKTKLRA--ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            KK +L+   + P+G  D   K +  R   + +I   +  +G   I+TP+ E  D L   
Sbjct: 27  TKKEQLKFLVKTPKGTRDYFPKTMNARETAIQTITRCFRRHGAVTIDTPVFELKDILTSK 86

Query: 60  LPDEDRPNKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
             +E    K ++ L D   G+ +S+RYDLT P ARY+A N    V   + Y+IG V+R +
Sbjct: 87  YGEEG--GKLIYDLADQGEGEKLSMRYDLTVPFARYLATNG---VKKIKRYQIGKVYRRD 141

Query: 119 KH--GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           +     GR R+F QCD D          DAE+  ++ + L  +  +   + I IN+RK+L
Sbjct: 142 QPYMTRGRQREFCQCDFDIAGEYDPMIPDAEIVSILNEVLTDL--EIGTFRIKINHRKLL 199

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           D I    G+  +    +   +  A+DKLDK   + V+  + E              L   
Sbjct: 200 DAIFVLAGVPRE----KFPAIFSAVDKLDKVSWEDVEKEMVEV-----------KGLDRA 244

Query: 236 QIDIMVSFLSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               +  ++ + D  K M++    +K     +   N++ ++ E     G   + ++   +
Sbjct: 245 VAQKVGEYVKMHDKPKVMYQKLVDMKLGETAKDAMNDMKLLIEYCDALGC-LDNVEFDMS 303

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YYTG ++EA++              GS+ GGGRYD LV  F    +P  GFS+G
Sbjct: 304 LVRGLDYYTGVIFEAVMVVGNT-------SVGSIAGGGRYDNLVGIFGANKIPCVGFSVG 356

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + R+++ L+  + S ++        +     D + L     Y   L   GI AE     +
Sbjct: 357 LERIMIILEE-KLSKSSKLYEAQTEVFVASVDKNRLINRLQYLNRLWEVGIYAETLQRVN 415

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
                +L+ AD   C  A+I G  E     + +K+L   K+L+ +    
Sbjct: 416 PKIKQELRDADEIGCRFAVIFGGSELEEKKVVLKNLITQKQLTIDDDKL 464


>gi|151942822|gb|EDN61168.1| histidyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 546

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 132/518 (25%), Positives = 225/518 (43%), Gaps = 69/518 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P+G  D    ++ IR  I  ++  +++ +G   I+TP+ E  + L     ++   +K
Sbjct: 55  LKTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKYGED---SK 111

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPGRFR 126
            +++L+D  G+  SLRYDLT P ARYVA N    +   + Y I  V+R ++     GR R
Sbjct: 112 LIYNLEDQGGELCSLRYDLTVPFARYVAMNN---IQSIKRYHIAKVYRRDQPAMTKGRMR 168

Query: 127 QFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           +F QCD D      +   D+E   ++ + L ++GIK  D+ I +N+RKILDGI +  G+ 
Sbjct: 169 EFYQCDFDVAGTFESMVPDSECLSILVEGLTSLGIK--DFKIKLNHRKILDGIFQIAGVK 226

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +D       +  A+DKLDK   + VK  + E               + E  D +  ++ 
Sbjct: 227 DED----VRKISSAVDKLDKSPWEAVKKEMTEE-----------KGQSEETADKIGEYVK 271

Query: 246 IDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           ++       ++      +      ++G +++  + +       +S  I    ++ RGL+Y
Sbjct: 272 LNGSLKEIHAVLSADANITSNEKAKQGLDDIATLMKYTEAFDIDS-FISFDLSLARGLDY 330

Query: 302 YTGCVYEAILGFPVMNEKQKP--------------VVFGSVGGGGRYDGLVSRFKG---- 343
           YTG +YE +       E                  V  GS+  GGRYD LV+ F      
Sbjct: 331 YTGLIYEVVTSASAPPENASELKKKAKSAEDASEFVGVGSIAAGGRYDNLVNMFSEASGK 390

Query: 344 --QNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYT 397
               +P  G S G+ R+   +K    SST        V +       D    L +    T
Sbjct: 391 KSTQIPCVGISFGVERIFSLIKQRINSSTTIKPTATQVFVMAFGGGKDWTGYLPERMKVT 450

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L  AGI AE    +  N   Q   A++  C +A+I G  E   G L++K L  G+E +
Sbjct: 451 KQLWDAGIEAEYVYKAKANPRKQFDAAEKAGCHIAVILGKEEYLEGKLRVKRL--GQEFA 508

Query: 458 REIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
            +                +  +++V  V++ L +  E+
Sbjct: 509 DDDGEL------------VSAADIVPIVQEKLSQIHED 534


>gi|319779674|ref|YP_004130587.1| Histidyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109698|gb|ADU92444.1| Histidyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 444

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 113/500 (22%), Positives = 198/500 (39%), Gaps = 66/500 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K   +    RG  D    E      + D + ++ ++YG+  I TP+LE +    + +
Sbjct: 1   MNSKKYEKISAIRGMNDILPTESFQWLILEDMLHSLMKSYGYKNIRTPVLEQTRLFARGI 60

Query: 61  PD-EDRPNKGVFSL---QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            +  D   K +++    QD     +++R + TA + R   E+  T     R Y +GPVFR
Sbjct: 61  GEVTDIVEKEMYTFSMSQDKAD-MLTMRPEFTAGVVRAAIEHSITFDRAQRLYTMGPVFR 119

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           +E+   GR+RQF Q  V+ +G S    DAE  +M+A      G++     I    +    
Sbjct: 120 HERPQKGRYRQFHQLSVEAMGFSGPDVDAEQIIMLARLWGTFGLEDIHLEINSLGQPNER 179

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
               +  +   +   + L      D   +     +++L  +     S            +
Sbjct: 180 LAHREALIKHLEANIDVLD----DDAKRRMYSNPLRVLDTKNPDMQSMA---------NE 226

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +  +L  + +                    +EL +  +          + +I+  +V
Sbjct: 227 APKLFDYLGEESKAHF-----------------DELKIRLD------EAGIKYRINPRLV 263

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +                +V GGGRYDGL     G+  P  GF+IG+ 
Sbjct: 264 RGLDYYNLTVFEWVT--------GSLGAQATVCGGGRYDGLFELLGGKPTPCVGFAIGLE 315

Query: 357 RLIVAL----KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           RLI  +    K+ E  +          +  +  +S++  K     ++ R +GI   +  G
Sbjct: 316 RLISLIISDSKNAEIKSKFTDIGQETQVYFIHQNSEAARKCSKLAELCRNSGIDVIVHAG 375

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           S +NF NQ K AD      AII G  E     + +K L              +   + + 
Sbjct: 376 S-QNFKNQFKRADFSGANYAIIIGESELQNDTVSLKQLR------------PNPDGSSIE 422

Query: 473 QITIPISELVSTVKKILQEN 492
           QITIP S++V  + K++ + 
Sbjct: 423 QITIPSSDVVVNLLKLINKK 442


>gi|217967357|ref|YP_002352863.1| histidyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|226737069|sp|B8E1C1|SYH_DICTD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|217336456|gb|ACK42249.1| histidyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 411

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 106/465 (22%), Positives = 186/465 (40%), Gaps = 61/465 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +   LPRG  D    EI   + I +  R+++E Y ++ I TP+ E+++   K   +  D 
Sbjct: 1   MSIGLPRGVQDILPDEIPFWHLIENIARSLFEKYNYEEIRTPIFEFTELFVKGTGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K +++ QD  G+ ++LR + T  + R    N      P  + Y IGP+FR E+   GR
Sbjct: 61  VMKEMYTFQDKKGRSLTLRPEGTPGVIRAYLMNKIYTTKPIWKVYYIGPMFRYERPQSGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI----GINNRKILDGILE 180
           +RQF Q  V+ +G      D E+  +  + L+++ ++  +  I     +  R      L+
Sbjct: 121 YRQFHQLGVEVLGRKDPYIDFEVISLAVEILKSLKLENLEIEINSLGCLKCRPAYREALK 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  D        L +    ++     +++L  +                 E     
Sbjct: 181 NYFYQYKD--------LLSPIDQERLERNPLRILDSKDEKIIP---------LKENAPQP 223

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  D +    ++   ++                         S   KIS  +VRGL+
Sbjct: 224 LDFLCNDCKDHFDKVLRYLQEA-----------------------SLNFKISPKLVRGLD 260

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  V+E                  +V GGGRYD LV  + G + P  GF++G+ RLI+
Sbjct: 261 YYTRTVFEITTTS--------LGAQNAVVGGGRYDNLVETYGGPSTPGLGFALGMERLIL 312

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +K  +            L      +   + K    +++LR    R E+    ++    Q
Sbjct: 313 LIKQQDKIKIEKPS----LFFLAIENEKYIKKAVEISKILR-INHRVEIG-SPNEPLRTQ 366

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           LK+AD+ N    I        + +L+IK+   G+E    I+N + 
Sbjct: 367 LKWADKLNSDYVIFI-NQMIEKDILRIKNFKTGEEKEIRIENLKE 410


>gi|45185873|ref|NP_983589.1| ACR187Wp [Ashbya gossypii ATCC 10895]
 gi|44981663|gb|AAS51413.1| ACR187Wp [Ashbya gossypii ATCC 10895]
          Length = 541

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 134/528 (25%), Positives = 228/528 (43%), Gaps = 68/528 (12%)

Query: 3   KKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           KK+KL+   + P+G  D   K++ IR  I   +  ++  +G   I+TP+ E  + L    
Sbjct: 42  KKSKLQVSLKTPKGTKDWADKDMVIREAIFQRLSGMFRRHGGVTIDTPVFELREILAGKY 101

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K ++ L+D  G+  SLRYDLT P AR+VA N    +   + Y I  V+R ++ 
Sbjct: 102 GED---SKLIYDLKDQGGELCSLRYDLTVPFARFVAMNN---IQNIKRYHIAKVYRRDQP 155

Query: 121 GPGRFRQFIQCDVDN-VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              + R       D  +  S E+   +   +        G+   D+ I +N+RKILDGI 
Sbjct: 156 AMTKGRMREFYQCDFDIAGSYESMVPDAECLSILVEGLTGLGIQDFKIKLNHRKILDGIF 215

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E  G+  +D       +  A+DKLDK   + V+            + T     +    D 
Sbjct: 216 EIAGVKEED----VRKISSAVDKLDKSPWEVVRK-----------EITVEKGQSEATADK 260

Query: 240 MVSFLSIDLEKSMHELYELVK------GTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           +  ++ +    S+ E+YE +            ++G  E+  +++  R  G N   I    
Sbjct: 261 IGEYVKLSG--SLEEVYEKLAADAAVTSNEKAKQGLEEMATLTKYTRAFGINE-FISFDL 317

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKP--------------VVFGSVGGGGRYDGLVS 339
           ++ RGL+YYTG +YEA+ G        +               V  GS+  GGRYD LV 
Sbjct: 318 SLARGLDYYTGVIYEAVTGASAPPSNAQELKAKAKDAEDASEYVGVGSIAAGGRYDNLVG 377

Query: 340 RF------KGQNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---S 389
            F      K  ++P  G S G+ R+   +K   E +++       V +       D    
Sbjct: 378 MFAEASGKKSVSIPCVGLSFGVERIFSLIKQRSERASSIRPTSTQVFVMAFGGGKDWTGY 437

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +    T+ L  AGI  E    S  N   Q + A++  CPLA+I G  E   G L++K 
Sbjct: 438 LPERMQVTKQLWDAGIDTEYVYKSKANPRRQFEAAEKSGCPLAVILGKEEYLEGKLRVKR 497

Query: 450 L------AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           L        G+    +  +     + ++A+I +   + +  V+++L+ 
Sbjct: 498 LGPEFADDDGE--LIDAADVVKVVKNKLAEIRV---DGMDEVERLLRS 540


>gi|228966222|ref|ZP_04127283.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228793490|gb|EEM41032.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 425

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 130/464 (28%), Positives = 217/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP+L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRTCEDTFERYGCKPLETPMLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EITIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  +    T     G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLSIDDFKDAF-NTPIVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    + P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNISYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I ++  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIISLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   + +  S+ 
Sbjct: 382 ANKENIPYVLIIGEEELSTETVMLRNMKEGSEVKVPLSSLSSYL 425


>gi|139438301|ref|ZP_01771854.1| Hypothetical protein COLAER_00843 [Collinsella aerofaciens ATCC
           25986]
 gi|133776498|gb|EBA40318.1| Hypothetical protein COLAER_00843 [Collinsella aerofaciens ATCC
           25986]
          Length = 437

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 98/483 (20%), Positives = 178/483 (36%), Gaps = 66/483 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           ++A+   G  D    E+R   ++      ++E +GF PIETP +E  D     +    D 
Sbjct: 1   MQAQKAEGTRDLIGAEMRAWQKMQQIAAGVFEPFGFKPIETPAIEQVDVFVHGIGQSTDV 60

Query: 66  PNKGVFSL-------------QD---DDGQWISLRYDLTAPLARYVAENFD--TIVFPCR 107
             K +F +              D      Q ++LR + TA + R V EN        P +
Sbjct: 61  VRKEMFRVFSGANLERVFTEGTDTKLKPKQRLALRPEGTAGVVRAVVENNLVPQGSTPFK 120

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y    +FR E+   GR RQF Q  ++ +G+    ADAE  +M+ +  + +G   +   +
Sbjct: 121 AYYAEAMFRGERPQKGRLRQFHQVGIEWLGAPDPAADAECIIMLMEFYKRLGFDLSKLRL 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            IN+    D            +           +  ++  L  ++    + + D+  +  
Sbjct: 181 LINSMG--DAQCRPAYREQVKQFILNHADEMCDECRERAELNPLRAF--DCKNDHCREIM 236

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
             A L  + +                            ++       +   +  +G    
Sbjct: 237 AEAPLMGDNL---------------------------CDECREHYEQVKRYLDAAG---I 266

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
                 T+VRGL+YYT  V+E       +               GRYDGLV    G+   
Sbjct: 267 EYVEDPTLVRGLDYYTRTVFEVEAPGAGVGSIGGG---------GRYDGLVELEGGKPTA 317

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             GF++G  R ++AL++  +     +      +   +   +        TQ LR AGI  
Sbjct: 318 GVGFAVGFERALLALQAFGNDLGADEAP---CVYVANAGKELRQNVFAITQELRAAGIVT 374

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E      ++   Q K AD+    L ++ G  E + G ++++D+   +E+  ++ N     
Sbjct: 375 EADY-QGRSLKAQFKQADKVGAKLILVLGGDELAVGKVKVRDMESHEEVLADLANVAEAV 433

Query: 468 EAR 470
             R
Sbjct: 434 RER 436


>gi|323306798|gb|EGA60083.1| Hts1p [Saccharomyces cerevisiae FostersO]
          Length = 526

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 136/526 (25%), Positives = 228/526 (43%), Gaps = 71/526 (13%)

Query: 3   KKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           KK KL+   + P+G  D    ++ IR  I  ++  +++ +G   I+TP+ E  + L    
Sbjct: 27  KKGKLQVSLKTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKY 86

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K +++L+D  G+  SLRYDLT P ARYVA N    +   + Y I  V+R ++ 
Sbjct: 87  GED---SKLIYNLEDQGGELCSLRYDLTVPFARYVAMNN---IQSIKRYHIAKVYRRDQP 140

Query: 121 --GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
               GR R+F QCD D      +   D+E   ++ + L ++GIK  D+ I +N+RKILDG
Sbjct: 141 AMTKGRMREFYQCDFDVAGTFESMVPDSECLSILVEGLTSLGIK--DFKIKLNHRKILDG 198

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I +  G+  +D       +  A+DKLDK   + VK  + E               + E  
Sbjct: 199 IFQIAGVKDED----VRKISSAVDKLDKSPWEAVKKEMTEE-----------KGQSEETA 243

Query: 238 DIMVSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           D +  ++ ++       ++      +      ++G +++  + +       +S  I    
Sbjct: 244 DKIGEYVKLNGSLKEIHAVLSADANITSNEKAKQGLDDIATLMKYTEAFDIDS-FISFDL 302

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKP--------------VVFGSVGGGGRYDGLVS 339
           ++ RGL+YYTG +YE +       E                  V  GS+  GGRYD LV+
Sbjct: 303 SLARGLDYYTGLIYEVVTSASAPPENASELKKKAKSAEDASEFVGVGSIAAGGRYDNLVN 362

Query: 340 RFKG------QNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---S 389
            F          +P  G S G+ R+   +K    SST        V +       D    
Sbjct: 363 MFSEASGKKSTQIPCVGISFGVERIFSLIKQRINSSTTIKPTATQVFVMAFGGGKDWTGY 422

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +    T+ L  AGI AE       N   Q   A++  C +A+I G  E   G L++K 
Sbjct: 423 LPERMKVTKQLWDAGIEAEYVYKXKANPRKQFDAAEKAGCHIAVILGKEEYLEGKLRVKR 482

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           L  G+E + +                +  +++V  V+  L +  E+
Sbjct: 483 L--GQEFADDDGEL------------VSAADIVPIVQXKLSQIHED 514


>gi|160915140|ref|ZP_02077353.1| hypothetical protein EUBDOL_01148 [Eubacterium dolichum DSM 3991]
 gi|158432939|gb|EDP11228.1| hypothetical protein EUBDOL_01148 [Eubacterium dolichum DSM 3991]
          Length = 483

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 96/475 (20%), Positives = 184/475 (38%), Gaps = 50/475 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++P+G  D    EI   +R+ + IR     Y +  I TP+ E+++   +     D  
Sbjct: 46  MSYQVPKGTQDILPSEIGKWHRLEELIRQFCYVYNYKEIRTPIFEHTNVFKRGNDSSDMV 105

Query: 67  NKGVFSLQ-DDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
           NK +++ Q ++    ++LR + TA +AR   E+        P + Y +GP FR+E+   G
Sbjct: 106 NKEMYTFQLENSATSLTLRPEGTAGVARAFVEHKLYGNADLPMKMYYVGPQFRHERPQKG 165

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R R F Q  V+ +G+ +   D E   +    + A+G++     I             K  
Sbjct: 166 RMRIFNQFGVEVIGAKSAMLDVEAIALGWSFVSALGLQDMKVLINTLGDDASRAAYRKAL 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                +  +  I     D   ++    +++L  +   D             + +  M  +
Sbjct: 226 ----KEHFKADIDTMCADCKRRYEQNPLRILDCKVDKDKD---------IMKNVPRMADY 272

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ + +    E+   +       +  + L                       VRGL+YYT
Sbjct: 273 LNEESKAYFDEVLAGLDALGIPYEVDDRL-----------------------VRGLDYYT 309

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVAL 362
             V+E +     M          +V  GGRYDGLV  F    ++   G+++G+ RLI+A 
Sbjct: 310 HTVFEVVSVNKEM------GAQSTVFAGGRYDGLVEYFGGPTSMSGIGWAMGLERLILAC 363

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++      + + +   ++      S    +       LR AG   +      ++F  Q K
Sbjct: 364 EAEGIELADEESLDAYVVCL---SSSVRKQVLQLVTQLRAAGYSTDTDY-LDRSFKAQFK 419

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
              R     AI+ G  +  +G + IK +A  K+L  ++++     +    +    
Sbjct: 420 TVARTRAKAAIVVGEDDIEKGSVTIKRVADQKKLEVKLEDIVEGMDTLFQEEACS 474


>gi|315587079|gb|ADU41460.1| histidine--tRNA ligase [Helicobacter pylori 35A]
          Length = 442

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 135/455 (29%), Positives = 218/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY++ L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLSKVSVVFQSFGFVPIETPHLEYAEVLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ I IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCISINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +             +L    I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLSGVEEELKKE-----------CDLDLNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNSMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ R      + G  E     L +K++  G +L
Sbjct: 389 SYANHRGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|206968745|ref|ZP_03229700.1| histidyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206735786|gb|EDZ52944.1| histidyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 426

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 129/464 (27%), Positives = 213/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   +  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRELALRYDLTIPFAKVVAMN-PNLRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMGMAFELFRTLNL---EITIQYNNRKLLNGILQAINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLKLTIADFKETF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 280 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNINYPTVGISFGLDVIYTALSQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 332 KE----TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   I +  S+ 
Sbjct: 383 ANKENIPYVLIIGEDELSTETVMLRNMKEGSEVKVPISSLSSYL 426


>gi|317009868|gb|ADU80448.1| histidyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 442

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 134/455 (29%), Positives = 216/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+ +L          
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAQTLLP--DASGDI 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCVAINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +              L S  I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKKE-----------CGLNSNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNEMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ R      + G  E     L +K++  G +L
Sbjct: 389 SYANHRGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|257056341|ref|YP_003134173.1| histidyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256586213|gb|ACU97346.1| histidyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 432

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 141/476 (29%), Positives = 227/476 (47%), Gaps = 53/476 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K     AE P G  D    ++R R    D++  ++E+YGFDP+ETP  E  +     L
Sbjct: 1   MAKA----AEPPSGTRDFLADDVRRRKAAFDTVAGVFEHYGFDPLETPAFERLEVFQGKL 56

Query: 61  PDEDRPNKGVFSLQDDD------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            +E   +  +F +             ++LRYD T PLAR V      +  P + Y IGPV
Sbjct: 57  GEE--ASALIFKILKRGVHEATGEADLALRYDHTVPLARVVGTYGSQLPSPYKRYAIGPV 114

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           +R ++   GRFR+F QCD+D VGS++  ADAE+   + D L A+G+  +D+ I +N+RK 
Sbjct: 115 WRADRPAKGRFREFTQCDIDTVGSASPLADAEVVWAIHDGLVALGV--DDFRILVNSRKA 172

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L G+LE  G+  +        +L  +DKLDK     V   L E   +         ++T+
Sbjct: 173 LHGLLEAYGVPEER----GAAILGTLDKLDKLSGDEVVAELVERGLEQRVARELVEDVTA 228

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
              D +                + +  T  G +G  E+  + EL    G    R+  +  
Sbjct: 229 TDTDRV---------------RKQLDTTERGREGLAEIDRLLELTS--GLPEGRVVFTPR 271

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YYTG ++E +               GS+  GGRYDGLV++  G ++PA G SIG
Sbjct: 272 MVRGLDYYTGPIFEVVAT----------GYPGSIASGGRYDGLVAKLGGPDLPACGGSIG 321

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R I+A+++ E+          V +        +          LR  G+R  ++LG+S
Sbjct: 322 IER-ILAIQAAEAE-------AGVGLDVALTVLRAEDTVMRMAADLRAQGLRTGVYLGTS 373

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              G QLK+A+ +   L +I G  E++ G++ ++D+A G +    + +  +    +
Sbjct: 374 GKLGKQLKWANDQRARLVLIHGPEEQAEGVVTVRDMASGDQNRVPVADVATTVREQ 429


>gi|302673523|ref|XP_003026448.1| hypothetical protein SCHCODRAFT_79846 [Schizophyllum commune H4-8]
 gi|300100130|gb|EFI91545.1| hypothetical protein SCHCODRAFT_79846 [Schizophyllum commune H4-8]
          Length = 590

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 112/541 (20%), Positives = 199/541 (36%), Gaps = 81/541 (14%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K+ +L  +  +G  D    E+  R  I   +R+++  YG   ++TP+ E  D L     
Sbjct: 56  KKRERLLLKTAKGTRDYGPGEMFCREHIERIVRSVFTAYGGSCVDTPVFERKDILTGKYG 115

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           ++   +K +F L+D  G+ ++LRYD T PLARY+A                   R+    
Sbjct: 116 ED---SKLIFDLKDQGGEELALRYDHTVPLARYLAMMGGNNTHSKIYQLSKVYRRDNPVM 172

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
                +       ++    +T   +  ++         +   D+ I +NNRKILDGI E 
Sbjct: 173 SKGRMREFSQADFDIIGQWDTMIPDAEIISVICSVISKLDVGDFTIKLNNRKILDGIFEV 232

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  D    +   +  A+DKLDK     V+  + E              L     D + 
Sbjct: 233 CGVPED----KIRPISSAVDKLDKAPWSEVRKEMTEE-----------KGLDGAVADRIW 277

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E     E + G    ++G  E+ ++ + +       +++    ++ RG
Sbjct: 278 EYVQHKGGPSLLETLRADEKLMGNARAKEGVEEMGLLFKYLDAYKLV-DKMSFDLSLARG 336

Query: 299 LEYYTGCVYEAILGFPVMNE---------------------------------------- 318
           L+YYTG +YEA+                                                
Sbjct: 337 LDYYTGVIYEAVCEASAPPGFTASNALASGSASALSSSTAPITGNTSTKKPKKAATDGEE 396

Query: 319 ---KQKPVVFGSVGGGGRYDGLVSRFKGQ---------NVPATGFSIGISRLIVALKSLE 366
               +  V  GS+  GGRYD LV  F            N+P  G +IG+ R+   +    
Sbjct: 397 DEVDESTVGVGSIAAGGRYDNLVGMFTAAAAGEGKKGLNMPCVGVAIGLDRIFSIVW--P 454

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       ++  M      L +     Q LR AGI+A+  + +      Q    +R
Sbjct: 455 KWVEKGMRSKETMVYVMAAGDGLLVERIRLVQELREAGIKADFLMKNKPKLPAQFAAGER 514

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P AII G  E   G++ +K     ++    +   +  +++      +  +EL+  +K
Sbjct: 515 DEAPFAIILGESELKEGLVTVK-----EQAWEFVDGKKEKKKSSDKGTQVKRAELIDWIK 569

Query: 487 K 487
            
Sbjct: 570 S 570


>gi|307822496|ref|ZP_07652727.1| histidyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736100|gb|EFO06946.1| histidyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 411

 Score =  220 bits (560), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 90/441 (20%), Positives = 183/441 (41%), Gaps = 55/441 (12%)

Query: 19  PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDDD 77
             ++  +       IR++   YG+  I  P++E ++   + + +  D   K +++  D +
Sbjct: 2   LPEQTPLWQYAELCIRDVLGAYGYSEIRLPIVEKTELFKRSIGEVTDIVEKEMYTFDDRN 61

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G  ++LR + TA   R   E+        R +  GP++R+E+   GR+RQF Q  V+  G
Sbjct: 62  GDSLTLRPEGTAGCLRACLEHGLLHNQVHRLWYYGPMYRHERPQKGRYRQFFQLGVETYG 121

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI--LEKIGLHGDDKLNERLI 195
            +    DAE+ ++M    + +G       I    R  L+ +  + +  ++ +  +     
Sbjct: 122 MAGPDIDAELILIMDRLWKKLG-------IRDKVRLQLNSLGTIAERIVYRESLVGYFQG 174

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
            L  +D+     L+   L + + +          A         ++ +L  +  +    +
Sbjct: 175 QLDQLDEDSLRRLETNPLRILDTKNPAMRQVVANA-------PELMDYLGDESRQHFKAI 227

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
             ++     G +  + L                       VRGL+YY+  V+E +     
Sbjct: 228 TTILDDLGIGYEINSRL-----------------------VRGLDYYSKTVFEWVT---- 260

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
                +    G+V  GGRYDGL+ +  G+   A GF++G+ RL+  +++L++        
Sbjct: 261 ----DELGSQGTVCAGGRYDGLIEQLGGKPNHAVGFAMGMERLLALMETLDNVQLARP-- 314

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
             V +  +     +  +   + + +R    G++ ++  G   +F +Q K AD+     AI
Sbjct: 315 --VDVYMIRVGETAEQEGMRFAETVRNEIPGLKLQVNCGGG-SFKSQFKKADKSGAEFAI 371

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           I G  E SRG + +K L   +
Sbjct: 372 ILGDDEVSRGEVSVKPLRNSE 392


>gi|218898400|ref|YP_002446811.1| histidyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218542658|gb|ACK95052.1| histidyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 425

 Score =  220 bits (560), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 129/464 (27%), Positives = 216/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP+L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRTCEDTFERYGCKPLETPMLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EITIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISKEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  +    T     G NEL  + + +   G N N I  +  + RGL  YTG +
Sbjct: 221 CLKLSIDDFKDAF-NTPIVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTI 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    + P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNISYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   + +  S+ 
Sbjct: 382 ANKENIPYVLIIGEEELSTETVMLRNMKEGSEVKVPLSSLSSYL 425


>gi|108563556|ref|YP_627872.1| histidyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123246915|sp|Q1CS74|SYH_HELPH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|107837329|gb|ABF85198.1| histidyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 442

 Score =  220 bits (560), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 133/455 (29%), Positives = 219/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY++ L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAEVLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIVASLKALDL--EDFCVSINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +             +L S  I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKKE-----------CDLNSNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             +     +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQDDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNEMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LNEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|108799252|ref|YP_639449.1| histidyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119868368|ref|YP_938320.1| histidyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126434910|ref|YP_001070601.1| histidyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|108769671|gb|ABG08393.1| histidyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119694457|gb|ABL91530.1| histidyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126234710|gb|ABN98110.1| histidyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 418

 Score =  220 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 96/472 (20%), Positives = 182/472 (38%), Gaps = 71/472 (15%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + P+G  D    E      + D + +     G+  +E P+ E +    + + +  D  +
Sbjct: 6   FQAPKGVPDYLPPESAQFVAVRDGLLSAARRAGYGDVELPIFEDTALFARGVGESTDVVS 65

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ++LR + TA + R V ++       P +    GP FR E+   GR+R
Sbjct: 66  KEMYTFADRGDRSVTLRPEGTAGVIRAVIQHRLDRGALPVKLCYAGPFFRYERPQAGRYR 125

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGI 178
           Q  Q  ++ +G      DAE+  +      ++G            D       R++L   
Sbjct: 126 QLQQVGIEAIGVDDPALDAEVIAVADAGFRSLGLDGFRLELTSLGDDTCRPQYRELLQDF 185

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L K+ L  + +    +  LR +D         V+ +  +                     
Sbjct: 186 LFKLDLDEETRRRAEINPLRVLDDKRPH----VREMTAD-------------------AP 222

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +M+  LS   +     +   ++                              I+  +VRG
Sbjct: 223 VMLDHLSDSAKAHFEAVQTHLQAL-----------------------GVPYVINPRMVRG 259

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT   +E +                 +GGGGRYDGL+ R  GQ+V   GF +G+ R 
Sbjct: 260 LDYYTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMRRLGGQDVSGIGFGLGVDRT 311

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL++   +   +     + +  +    D+     +    LR AG+RA++  G  ++  
Sbjct: 312 LLALRAEGKTAGQVAR---IDVYCIPSGPDAKVDIAVLAADLRRAGVRADVAYG-DRSLK 367

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             LK ADR    +A+I   G  +   +++KDL  G ++    +   +   +R
Sbjct: 368 AALKAADRTGASIALIADPG-VA--TVKVKDLGTGDQIEMAREAVVAEVVSR 416


>gi|258545520|ref|ZP_05705754.1| histidine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258519220|gb|EEV88079.1| histidine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 423

 Score =  220 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 104/474 (21%), Positives = 181/474 (38%), Gaps = 54/474 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E     ++ D I  +   Y + P++ PLLE +    + +
Sbjct: 1   MAKAQ---IQSLRGMNDVFPPEASHLQQLHDLIHAVLARYAYRPLQLPLLEQTGLFKRAV 57

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D + + I+LR + TA + R + ++   +  P R Y  GP+FR E+
Sbjct: 58  GEETDVVSKEMYTFCDRNDESITLRPEATAGVVRAMIQHG-KLQQPQRVYAEGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR RQF Q  V+  G +    DAE+  + AD    +G+             +L   L
Sbjct: 117 PQKGRSRQFSQVSVEAFGMAGAALDAELIAICADLFRRLGV-----------LDLLTLEL 165

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             IGL  +    ++ +V    + LD       +  L             G     +    
Sbjct: 166 NTIGLAEERHAFQQALVAYLQNHLDALDDDS-RRRLTINPLRILDSKNAGVQAVLDGAPA 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +L  +       L  L+                              + +  +VRGL
Sbjct: 225 LDDYLGAESRAHFARLTALLDA-----------------------QGIAWRRNPRLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E                 G+V  GGRYDGLV +  G+  PA GF+ GI R++
Sbjct: 262 DYYCHTVFEWTT--------DALGAQGTVTAGGRYDGLVEQLGGKPTPAAGFAFGIERIL 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +  ++ +          P  +  +  D    +      Q LR A I   +     +   N
Sbjct: 314 LLAQTRD-----TFRDTPPAVYAIATDDAHFASLLPLVQRLRDADIAV-LVQTQVQALKN 367

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           QL+ AD+     A+I G  E +     +K+L  G +    +    ++ + R+ +
Sbjct: 368 QLRKADQEGAHYALIIGDDEAANQSASLKNLRDGNQERLPLAETPAYLQERLKE 421


>gi|284162694|ref|YP_003401317.1| histidyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284012691|gb|ADB58644.1| histidyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 407

 Score =  220 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 99/459 (21%), Positives = 178/459 (38%), Gaps = 58/459 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R E PRG  D    E+  R  I   +R I E+YG+  + TP  E+ +       +    
Sbjct: 1   MRIERPRGTRDFLPDEMEKRRAIEKVMRRIAESYGYREVLTPTFEHLELFTIKSGEGIV- 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +++ +D  G+ ++LR +LTAP+ R        +  P R Y     FR E+   GR+R
Sbjct: 60  -EEIYAFKDKSGRDLALRPELTAPVMRMYVNECMGMPKPLRFYYFANCFRYERPQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +GS +  AD E+  +  + + A+ IK + +   +       G+L  +    
Sbjct: 119 EFWQFGVELIGSDSYLADVEVISLAYEIMSALNIKFDLHVGHV-------GLLRHVLRDL 171

Query: 187 DDKLNERLIVLRAIDKLDKFG--LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           D+K+  +++ L     LD     +  +     +       +     ++  E  +I+  F 
Sbjct: 172 DEKVAGKIMRLIDKKDLDTLDSYINEIGREDLKEVVYPLIELVGDTDIIEEAREIIPDFD 231

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
              +EK    L +L                               KI   I RGL+YYTG
Sbjct: 232 FTHIEKVAKTLDDL---------------------------GVEFKIDLGIARGLDYYTG 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+EA          +       + GGG Y  L   F G +VPATGF++G  R+    + 
Sbjct: 265 IVFEAY--------AEGLGAQNQICGGGSY-RLAHLFGGDDVPATGFALGFDRIAEICE- 314

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                    ++       +        +       +R+      +     ++   QL +A
Sbjct: 315 --------VDVEKPTKVVIVSFRGLEKEALKIANAIRSK--AVTITDVMERSVKKQLSFA 364

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +  +   A+I G  E   G + +K+L   ++    +   
Sbjct: 365 NDISADYAVIVGEKELKEGKIAVKNLRTQEQSVMTLDEF 403


>gi|228901818|ref|ZP_04065989.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 4222]
 gi|228857839|gb|EEN02328.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 4222]
          Length = 425

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 132/464 (28%), Positives = 218/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP+L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRTCEDTFERYGCKPLETPMLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EITIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISKEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  +    T     G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLSIDDFKDAF-NTPIVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN--VPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++  F+G N   P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNIIYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   + +  S+ 
Sbjct: 382 ANKENIPYVLIIGEEELSTETVMLRNMKEGSEVKVPLSSLSSYL 425


>gi|71023889|ref|XP_762174.1| hypothetical protein UM06027.1 [Ustilago maydis 521]
 gi|46101632|gb|EAK86865.1| hypothetical protein UM06027.1 [Ustilago maydis 521]
          Length = 583

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 126/531 (23%), Positives = 215/531 (40%), Gaps = 81/531 (15%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           K   + P+G  D     + +R RI  +I +++  +G   I+TP+ E  + L     ++  
Sbjct: 70  KFTLKTPKGTRDWEPLSMSLRKRIFSTIEDVFTAHGGVTIDTPVFELKEILSGKYGED-- 127

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPG 123
            +K ++ LQD  G+  SLRYDLT P AR+VA N        + Y I  V+R ++     G
Sbjct: 128 -SKLIYDLQDQGGELCSLRYDLTVPFARFVAMNQSEY-GNIKRYHIAKVYRRDQPAMSKG 185

Query: 124 RFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           RFR+F QCD D          D+E   ++ + L+A+GI+   + I +N+RKILDG+ +  
Sbjct: 186 RFREFYQCDFDIAGIYDPMVPDSEALCVLVEALDALGIEA--FTIKLNHRKILDGLFDIC 243

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+  D    +   +  A+DKLDK     VK            +      L  +  D +  
Sbjct: 244 GVPAD----KIRTISSAVDKLDKSPWAEVKR-----------EMVSDKGLAEDVADRIGE 288

Query: 243 FLSIDLEKSMHELYEL---VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +   K +    +    +       +G  ++ ++ + +   G  S+R+    ++ RGL
Sbjct: 289 YVKLKGGKDLLAKLKADHVMMAHPVASQGVKDIELLFDYLDVYGI-SDRMSFDLSLARGL 347

Query: 300 EYYTGCVYEAILGFPVMNE------------------------------KQKPVVFGSVG 329
           +YYTG +YEA+                                       +  V  GS+ 
Sbjct: 348 DYYTGLIYEAVTAASAPPGFNAAEAASAGGADNKSKKPKKKGADGEEEVDESSVGVGSIA 407

Query: 330 GGGRYDGLVSRF----KGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLI 380
            GGRYD LV  F    K   VP  G SIG+ R+   +     +       +        +
Sbjct: 408 AGGRYDNLVGMFSGSKKPDAVPCVGISIGVERVFAIMMQRLKEKEGKGERSTVRSKETDV 467

Query: 381 TTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
             M    +  L +    T+ML  AGI+AE    +      Q    D+   P A+I    E
Sbjct: 468 FVMSIGGEGLLKERMQVTKMLWDAGIKAEFMHKAKPKLPQQFGVVDKEAIPFAVILAPNE 527

Query: 440 R--SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                  +++K      +   +  +     E +     + +  LV  +K +
Sbjct: 528 WNGETREVRVK------QQKGKDSD-----EGQGQGDLVKLDNLVEYLKTL 567


>gi|24212754|ref|NP_710235.1| histidyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|32130110|sp|Q8F9Y3|SYH_LEPIN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|24193395|gb|AAN47253.1|AE011197_5 histidyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 439

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 107/473 (22%), Positives = 191/473 (40%), Gaps = 36/473 (7%)

Query: 1   MGKKTKLRAELP-RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  +       P +G  D   +++R+RN +   +R    ++G++  + P+LE  D     
Sbjct: 1   MENQKNFLTTAPYKGTRDFYPEDMRLRNWMFSVMRETVLSFGYEEYDGPILESFDLYKAK 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             +E    + ++   D   + +++R ++T  LAR VA N   +  P R + I  ++R E+
Sbjct: 61  SGEE-IVERQLYDFIDKGERRVAIRPEMTPTLARMVAGNLRNLPKPVRWFSIPNLWRYEQ 119

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            G GR R+  Q +VD  G  +  A+ E+ ++    L+  G     Y I +++RK+LD  L
Sbjct: 120 PGKGRLREHWQLNVDLFGVDSHRAELEILLIADSILKKFGAPIGSYQIKVSHRKLLDSFL 179

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +       D+++    +L   DK  K   +  +  +               N   EQ  +
Sbjct: 180 KNSLKLNGDQVHGVSKLL---DKKSKISPEAFETEMKPF-----------LNNFKEQFSL 225

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + ++L+ +L        E V      +      +              ++    +I+RG 
Sbjct: 226 IETYLNSNL--------ETVSKIPGIDTNSVSFIQNLFQELGELGIDKQLLFDPSIIRGF 277

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTGC++E             P    S+ GGGRYD L+  F  + +   GF +G   L 
Sbjct: 278 DYYTGCIFEVFDT--------NPENRRSLYGGGRYDNLIGLFSKEQLSGIGFGLGDVTLK 329

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L+      N  +E     I     D          ++ LR   I  E  L S+K  G 
Sbjct: 330 NFLEGHNLIPNLSREKT---IFLPIMDESLFVDTFKLSKELRENEILTETMLDSAK-IGK 385

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           Q++ A+++     +  G  E     +QIKDL  G++ S   K      +    
Sbjct: 386 QIQIAEKKGYRYVLFLGESEIRTETVQIKDLISGEQKSLPRKGLSDTLKKDFQ 438


>gi|317014580|gb|ADU82016.1| histidyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 442

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 134/455 (29%), Positives = 219/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY++ L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAEVLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCVSINHRKILNGICEYFGIA- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   VLR +DKL+K GL GV+  L +             +L S  I  ++  + I
Sbjct: 177 -----QVNEVLRIVDKLEKIGLNGVEEELKKE-----------CDLDSNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNDMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|294651486|ref|ZP_06728799.1| histidine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822636|gb|EFF81526.1| histidine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 430

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 95/473 (20%), Positives = 171/473 (36%), Gaps = 62/473 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +      +   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDILPTQTAAWRSLEQQLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGTPPESLTLRPEGTAGCVRAMLEHNLLRGAAPRVWYVGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ +M A   + +G+  N     +     + R      L +   
Sbjct: 128 QFGVETFGVATPDIDAEIILMTARLWKRMGMAENVRLELNTLGETDERAEYRAALVEFLN 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D+L+E        D   +     +++L  +  +              E    +  FL
Sbjct: 188 QHKDQLDE--------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKLHDFL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D      +L + +                               I+  +VRGL+YY  
Sbjct: 231 KEDSLNHFQQLQQYLTDA-----------------------GVEFVINQKLVRGLDYYNK 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 G+V  GGRYDGLV + KG+   +         +   L  
Sbjct: 268 TVFEWTTT--------MLGSQGTVCAGGRYDGLVGQLKGKPDQSVPAVGFAMGMERLLLL 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKNFGNQ 420
           LE    N       +      +    +K  +  + +R     A     +  GS  +  +Q
Sbjct: 320 LEQVAQNKDTRDCEVFLLA--EPAYQAKALVLAEQIRDQLEAANSTIRLKTGSQGSMKSQ 377

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +K AD+     A+I G  E     L +K+LA  ++    +     +   +  Q
Sbjct: 378 MKKADQSGAVYAVILGEREWDSQQLLVKELATAEQSQVSLAELAPFFIEKFKQ 430


>gi|226954470|ref|ZP_03824934.1| histidyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226834819|gb|EEH67202.1| histidyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 430

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 93/473 (19%), Positives = 170/473 (35%), Gaps = 62/473 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +      +   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDILPTQTAAWRSLEQQLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGTPPESLTLRPEGTAGCVRAMLEHNLLRGAAPRVWYVGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ +M A   + +G+  N     +     + R      L +   
Sbjct: 128 QFGVETFGVATPDIDAEIILMTARLWKRMGMAENVRLELNTLGETDERAEYRAALVEFLN 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D+L++        D   +     +++L  +  +              E    +  FL
Sbjct: 188 QHKDQLDD--------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKLHDFL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D      +L + +                               I+  +VRGL+YY  
Sbjct: 231 KEDSLNHFQQLQQYLTDA-----------------------GVEFVINQKLVRGLDYYNK 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 G+V  GGRYDGLV + KG+   +         +   L  
Sbjct: 268 TVFEWTTT--------MLGSQGTVCAGGRYDGLVGQLKGKPDQSVPAVGFAMGMERLLLL 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKNFGNQ 420
           LE            +      +    +K  +  + +R     A     +  GS  +  +Q
Sbjct: 320 LEQVAQTKDTRDCEVFLLA--EPAYQAKALVLAEQIRDQLEAANSTIRLKTGSQGSMKSQ 377

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +K AD+     A+I G  E     L +K+LA  ++    +     +   +  Q
Sbjct: 378 MKKADQSGAVYAVILGEREWDSQQLLVKELATAEQSQVSLAELAPFFIEKFKQ 430


>gi|300118312|ref|ZP_07056059.1| histidyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724281|gb|EFI64976.1| histidyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 425

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 129/464 (27%), Positives = 214/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRALALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLSIADFKEAF-NNPLIADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     +     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TVSSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   + +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEELSTNTVMLRNMKEGSEVKVPLSSLSNYL 425


>gi|228959517|ref|ZP_04121203.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228800149|gb|EEM47080.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 426

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 127/464 (27%), Positives = 213/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   +  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRELALRYDLTIPFAKVVAMN-PNLRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMGMAFELFRTLNL---EITIQYNNRKLLNGILQAINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  + + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMANTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 280 YEIFLKDRSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 332 KE----TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   I +  ++ 
Sbjct: 383 ANKENIPYVLIIGEDEFSTNTVVLRNMKEGSEVKVPISSLSNYL 426


>gi|56416461|ref|YP_153535.1| histidyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81677670|sp|Q5PBP9|SYH_ANAMM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|56387693|gb|AAV86280.1| histidyl tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 430

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 114/463 (24%), Positives = 182/463 (39%), Gaps = 56/463 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D   +E      I D   +I E YGF P+ETP+ E+ D   K L D  D  
Sbjct: 5   KLQPVRGTRDLLPEECYKFWHIRDVAHDIGERYGFVPVETPIFEFQDVFLKTLGDSSDII 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S  D  G  + LR +LTA +AR +     T+    R +  GPVFR E+    R R
Sbjct: 65  GKEMYSFPDRGGDVLVLRPELTAAVARMLICERLTLP--ARLFTFGPVFRYERPQKCRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + ++ G +  TADAE+  +  D L A+ ++  +  + IN+    D IL       
Sbjct: 123 QFHQINYEHFG-AGCTADAELMALAYDILGALNLRS-EVQLEINSLGNQDSILGYRNSLL 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K  E+     + D   +     +++L  + R D       GA +       +  F   
Sbjct: 181 --KYFEKHEHALSEDSRRRLQTNPLRILDSKDRGD--IAILCGAPV-------IADFYDD 229

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +   + + + + +                               ++  +VRGL+YY G V
Sbjct: 230 ESNMTFNGVMQQLDNL-----------------------GIPYTVNPRLVRGLDYYCGTV 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E                  +V  GGRYD LV+   G +VPA GF+ G+ RL        
Sbjct: 267 FEFKTTS--------LGSQDAVIAGGRYDKLVASMGGGDVPAVGFAGGVERLASL----- 313

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        +  +    ++          LR  GIR     G  +     LK+ADR
Sbjct: 314 ---AAYSHSTRFSVAFLPLGEEAARCAMRSAYELRGRGIRVLCD-GVVEKLKIGLKHADR 369

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               LA+I G  E ++G +  + +  G + +  I N   +   
Sbjct: 370 SGVDLALILGDEEIAKGEVLCRHMDTGLQQTVSISNLGDYVSG 412


>gi|196037936|ref|ZP_03105246.1| histidine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|229092286|ref|ZP_04223458.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock3-42]
 gi|196031206|gb|EDX69803.1| histidine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|228690988|gb|EEL44755.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock3-42]
          Length = 425

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 132/464 (28%), Positives = 218/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYEIMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRELALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINMPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ SM +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLQLSMADFKEAF-NNPLVTNGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++  F+G ++  P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALAQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   I +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEELSTNTVMLRNMKEGSEVKVPISSLSNYL 425


>gi|184156832|ref|YP_001845171.1| histidyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|332873247|ref|ZP_08441204.1| histidine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|229558636|sp|B2I3E6|SYH_ACIBC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|183208426|gb|ACC55824.1| Histidyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|322506724|gb|ADX02178.1| hisS [Acinetobacter baumannii 1656-2]
 gi|323516598|gb|ADX90979.1| histidyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332738759|gb|EGJ69629.1| histidine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 430

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 94/475 (19%), Positives = 166/475 (34%), Gaps = 70/475 (14%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDVLPTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILE 180
           Q  V+  G +    +AE+ +M A   + +G             +       R  L   L 
Sbjct: 128 QFGVETFGVATPDIEAEVILMTARLWKRMGVAHMVQLELNTLGEKEERTEYRNALVAFLN 187

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +     D+            D   +     +++L  +  +              E    +
Sbjct: 188 EHKDALDE------------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKL 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             FL  D      +L + +                            +  I+  +VRGL+
Sbjct: 227 YDFLKEDSLSHFQQLQDYLTAA-----------------------GIKFVINQKLVRGLD 263

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E                 G+V GGGRYDGLV + KG+   +         +  
Sbjct: 264 YYNKTVFEWTTTA--------LGSQGTVCGGGRYDGLVGQLKGKADQSVPAVGFGMGMER 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKN 416
            L  +E                   +    SK  +  + LR     A     +  GS  +
Sbjct: 316 LLLLIEQVEQAEIVRDCEAFLVA--EPAYQSKALVLAEQLRDQLEAANSNIRIKTGSQGS 373

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             +Q+K AD+     AII G  E     L +K+LA  ++    +     +   + 
Sbjct: 374 MKSQMKKADQAGAVYAIILGEREWEAQQLAVKELATAEQSQVALAELVPFLIEKF 428


>gi|149926359|ref|ZP_01914620.1| histidyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824722|gb|EDM83936.1| histidyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 441

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 113/496 (22%), Positives = 184/496 (37%), Gaps = 69/496 (13%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            KK   R +  +G  D    E      +   +R    +YG+  I+TP+LE +    + + 
Sbjct: 12  AKKQT-RLQSVKGMNDVLPVEGIHWENLEVMLREWLTSYGYRLIKTPVLEPTSLFRRGIG 70

Query: 62  D-EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +  D   K +FS  D  +G  ++LR + TA +AR   ++  T   P R Y +GPVFR+E+
Sbjct: 71  EVTDIVEKEMFSFVDRLNGDELTLRPEFTAGIARATIQHNLTYAAPQRVYSMGPVFRHER 130

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q DV+ +G +    DAE+ +M++     +G++     I            
Sbjct: 131 PQRGRYRQFHQLDVEALGFAGPDIDAELIVMLSRLWREMGLEDVRLEINCLGEAPERLAH 190

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +  +       E    L   D   +     +++L  +       D   GA         
Sbjct: 191 RQALITY----FEANAELLDEDAKRRLHSNPLRILDTK--NPTMQDMVNGA-------PR 237

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  FL          +  L+                            R   +  +VRGL
Sbjct: 238 LSEFLGEQSLAHYQGVKRLLDDA-----------------------GVRYIENPRLVRGL 274

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E I               G++ GGGRYDGL+    G+  PA GF+IG+ RL+
Sbjct: 275 DYYNLTVFEWIT--------DALGTQGTICGGGRYDGLIEVLGGKPTPAIGFAIGLERLL 326

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                L    N   +   + +  +     +  +     + LR AG    +  G    F +
Sbjct: 327 E----LYLEVNQPDDTADLDVYVVHQGEGTARRAFTLAEELRDAGFAVVLHAGGGG-FKS 381

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           Q+K AD     +A+I G  E + G   +K L                      Q      
Sbjct: 382 QMKRADVSGAAVAVILGENELNAGTAAVKLLR-----------------GESKQEEFKQE 424

Query: 480 ELVSTVKKILQENKEE 495
            L   +  +L    EE
Sbjct: 425 GLAEAIFGLLYGEGEE 440


>gi|45655962|ref|YP_000048.1| histidyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|54039666|sp|P62371|SYH_LEPIC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|45599195|gb|AAS68685.1| histidyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 439

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 101/473 (21%), Positives = 186/473 (39%), Gaps = 36/473 (7%)

Query: 1   MGKKTKLRAELP-RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  +       P +G  D   +++R+RN +   +R    ++G++  + P+LE  D     
Sbjct: 1   MENQKNFLTTAPYKGTRDFYPEDMRLRNWMFSVMRETVLSFGYEEYDGPILESFDLYKAK 60

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             +E    + ++   D   + +++R ++T  LAR VA N   +  P R + I  ++R E+
Sbjct: 61  SGEE-IVERQLYDFIDKGERRVAIRPEMTPTLARMVAGNLRNLPKPVRWFSIPNLWRYEQ 119

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            G GR R+  Q +VD  G  +  A+ E+ ++    L+  G     Y I +++RK+LD  L
Sbjct: 120 PGKGRLREHWQLNVDLFGVDSHRAELEILLIADSILKKFGAPIGSYQIKVSHRKLLDSFL 179

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +       D+++    +L    K+     +           +         N   E +  
Sbjct: 180 KNSLKLNGDQVHGVSKLLDKKSKISSEAFETEMKPFLNNFKEQFSLIETYLNSNLETVSK 239

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +   +  +    +  L++ +      ++                     +    +I+RG 
Sbjct: 240 I-PGIDTNSVSFIQNLFQELGELGIDKQ---------------------LLFDPSIIRGF 277

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTGC++E             P    S+ GGGRYD L+  F  + +   GF +G   L 
Sbjct: 278 DYYTGCIFEVFDT--------NPENRRSLYGGGRYDNLIGLFSKEQLSGIGFGLGDVTLK 329

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L+      N  +E     I     D          ++ LR   I  E  L S+K  G 
Sbjct: 330 NFLEGHNLIPNLSREKT---IFLPIMDESLFVDTFKLSKELRENEILTETMLDSAK-IGK 385

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           Q++ A+++     +  G  E     +QIKDL  G++ S   K      +    
Sbjct: 386 QIQIAEKKGYRYVLFLGESEIRTETVQIKDLISGEQKSLPRKGLSDTLKKDFQ 438


>gi|317177936|dbj|BAJ55725.1| histidyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 442

 Score =  219 bits (558), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 134/455 (29%), Positives = 219/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+ +L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAMQKAQLLSKVSVVFQSFGFVPIETPHLEYAQTLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIVQVIVASLKALDL--EDFCVSINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   VLR +DKL+K GL GV+  L +             +L    I  ++  + I
Sbjct: 177 -----QVNEVLRIVDKLEKIGLNGVEEELKKE-----------CDLDLNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNGMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|307104891|gb|EFN53142.1| hypothetical protein CHLNCDRAFT_36479 [Chlorella variabilis]
          Length = 504

 Score =  219 bits (558), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 123/454 (27%), Positives = 201/454 (44%), Gaps = 49/454 (10%)

Query: 20  TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYS-DSL-GKFLPDEDRPNKGVFSLQDDD 77
             ++ IR      I  +++ +G   I+TP+ E S ++L GK+  D    +K ++ L D  
Sbjct: 2   PDQMAIREVAFGKITGVFKRHGAVSIDTPVFELSRETLMGKYGED----SKLIYDLADQG 57

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRFRQFIQCDVDN 135
           G+ +SLRYDLT P AR+VA +    V   + Y I  V+R ++     GRFR+F QCD D 
Sbjct: 58  GEILSLRYDLTVPFARFVALHG---VGNIKRYHIAKVYRRDQPQMARGRFREFFQCDFDI 114

Query: 136 V-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
                +   DAE+  ++ + L+ +  +  +Y I +N+R +LD +L+  G+       +  
Sbjct: 115 AGSYPSMVPDAEVLKVLVEILDDL--QLGEYEIKLNHRLLLDSMLDIAGVPP----QKFR 168

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE----- 249
            +  AIDKLDK   + V+  + E              L     D +  F+ +  +     
Sbjct: 169 PICSAIDKLDKEPWEVVRAEMVEE-----------KGLPGHVADRIGEFVVLRGQPLELL 217

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + + E    +           EL  +   ++  G     I    ++ RGL+YYTG +YEA
Sbjct: 218 EKLTEAAHPLAQHPDSAVALEELRTMFGFLQSMG-ALGPIVFDLSLARGLDYYTGVIYEA 276

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---- 365
           +L              GS+  GGRYD LV  F G++VPA G SIGI R+   +++     
Sbjct: 277 VLKG---------GNVGSIAAGGRYDKLVGMFSGKDVPAVGVSIGIERVFAIMEAQLRLQ 327

Query: 366 -ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E                         +       L  +GI+AE    ++    +QL YA
Sbjct: 328 AEQQAGGTIRETETEALVASIGGGMQPRRMRICSELWASGIKAEFGYKANPKMPDQLGYA 387

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            ++  P  ++ G  E   G+++IKDL  G E   
Sbjct: 388 LKQGIPYMVLFGESEVEAGVVKIKDLDAGTEEVV 421


>gi|326563520|gb|EGE13779.1| histidyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 422

 Score =  219 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 96/477 (20%), Positives = 179/477 (37%), Gaps = 76/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K         RGF D   ++      +  ++  + ++YG+  I  PL+E +    + +
Sbjct: 1   MNK-----ITAIRGFNDVLPEQTPAWRAMERTLIEVMDSYGYSQIRLPLVEETQLFARGV 55

Query: 61  PD-EDRPNKGVFSL-----QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            +  D   K +F +     + D+G   +LR + TA   R + E+  T     + + +GP+
Sbjct: 56  GEATDIVEKEMFGVVHGGNKGDEGSSFTLRPEGTAGCVRAIVEHNLTRGDTPKLWYLGPM 115

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGI 169
           FR E+   GR+RQF Q  V+  G+    ADAE+  M     + +GI  +     +     
Sbjct: 116 FRYERPQKGRYRQFHQLGVEYFGAELPDADAELIAMTYHMWQKLGIGEHVTLQLNTLGET 175

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           + R      L +      + L++        D   +     +++L  +            
Sbjct: 176 DERVAYKSALVEYLTTHQEALDD--------DSKRRLNTNPLRILDSKDENTQQ------ 221

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                +    +  FL         ++   +       +  ++L                 
Sbjct: 222 ---ILQNAPKLGEFLGEASLAHFEKVQNYLSALGISFEINDKL----------------- 261

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD---GLVSRFKGQNV 346
                 VRGL+YY   V+E +          K     +V GGGRYD   G++     Q+ 
Sbjct: 262 ------VRGLDYYNKTVFEWVT--------DKLGSQATVCGGGRYDGLVGIIKGKAEQSE 307

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ--MLRTAG 404
           PA GF++G+ RL++ + ++      +     V +       D       Y +   LR   
Sbjct: 308 PAVGFAMGLERLMLLIDAVN--PYQVTSWCDVFVIAHP---DYYIDGLKYAESLRLRQDN 362

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +R +M   S+    +Q+K AD+      +I    E +   + IK +A G++    I 
Sbjct: 363 LRVKMA--SATGLKSQMKKADKSGAAYTVIIAEDEVNANQITIKTMATGEQRRAPID 417


>gi|229558641|sp|A3M212|SYH_ACIBT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|193076311|gb|ABO10956.2| histidyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 430

 Score =  219 bits (557), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 95/475 (20%), Positives = 166/475 (34%), Gaps = 70/475 (14%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDVLPTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILE 180
           Q  V+  G +    +AE+ +M A   + +G             +       R  L   L 
Sbjct: 128 QFGVETFGVATPDIEAEVILMTARLWKRMGVAHMVQLELNTLGEKEERTEYRNALVAFLN 187

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +     D+            D   +     +++L  +  +              E    +
Sbjct: 188 EHKDALDE------------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKL 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             FL  D      +L + +                            +  I+  +VRGL+
Sbjct: 227 YDFLKEDSLSHFQQLQDYLTAA-----------------------GIKFVINQKLVRGLD 263

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E                 G+V GGGRYDGLV + KG+   +         +  
Sbjct: 264 YYNKTVFEWTTTA--------LGSQGTVCGGGRYDGLVGQLKGKADQSVPAVGFGMGMER 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKN 416
            L  +E                   +    SK  +  + LR     A     +  GS  +
Sbjct: 316 LLLLIEQVEQAEIVRDCEAFLVA--EPAYQSKALVLAEQLRDQLEAANSNIRIKTGSQGS 373

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             +Q+K AD+     AII G  E     L IK+LA  ++    +     +   + 
Sbjct: 374 MKSQMKKADQAGAVYAIILGEREWEAQQLAIKELATAEQSQVALAELVPFLIEKF 428


>gi|229018548|ref|ZP_04175407.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH1273]
 gi|229024804|ref|ZP_04181240.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH1272]
 gi|228736515|gb|EEL87074.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH1272]
 gi|228742760|gb|EEL92901.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH1273]
          Length = 430

 Score =  219 bits (557), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 127/462 (27%), Positives = 214/462 (46%), Gaps = 42/462 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     G+FR
Sbjct: 61  LKEIYTLKDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGKFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   D  I  NNRK+L+GILE I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---DVTIQYNNRKLLNGILESINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              +T E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDILER------------GITVEMADTICTTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G  EL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLTIADFKETF-NNPLVTDGVEELQQLQQYLSALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLTDASITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E+ +          +  +   ++   +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KETISFTAD------VFIIPLGTEL--QCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++ N P  +I G  E S   + ++++ +G E+   + + E+
Sbjct: 382 ANKENIPYVLIIGEEELSTETVVLRNMKEGTEVKISLSSLEN 423


>gi|296113389|ref|YP_003627327.1| histidyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921083|gb|ADG61434.1| histidyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326559872|gb|EGE10272.1| histidyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326560779|gb|EGE11146.1| histidyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326569642|gb|EGE19694.1| histidyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326570123|gb|EGE20168.1| histidyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326570861|gb|EGE20885.1| histidyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326574411|gb|EGE24353.1| histidyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326575996|gb|EGE25919.1| histidyl-tRNA synthetase [Moraxella catarrhalis CO72]
 gi|326576408|gb|EGE26317.1| histidyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 422

 Score =  219 bits (557), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 96/477 (20%), Positives = 179/477 (37%), Gaps = 76/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K         RGF D   ++      +  ++  + ++YG+  I  PL+E +    + +
Sbjct: 1   MNK-----ITAIRGFNDVLPEQTPAWRAMERTLIEVMDSYGYSQIRLPLVEETQLFARGV 55

Query: 61  PD-EDRPNKGVFSL-----QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            +  D   K +F +     + D+G   +LR + TA   R + E+  T     + + +GP+
Sbjct: 56  GEATDIVEKEMFGVVHGGNKGDEGSSFTLRPEGTAGCVRAIVEHNLTRGDTPKLWYLGPM 115

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGI 169
           FR E+   GR+RQF Q  V+  G+    ADAE+  M     + +GI  +     +     
Sbjct: 116 FRYERPQKGRYRQFHQLGVEYFGAELPDADAELIAMTYHMWQKLGIGEHVTLQLNTLGET 175

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           + R      L +      + L++        D   +     +++L  +            
Sbjct: 176 DERVAYKSALVEYLTTHQEALDD--------DSKRRLNTNPLRILDSKDENTQQ------ 221

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                +    +  FL         ++   +       +  ++L                 
Sbjct: 222 ---ILKNAPKLGEFLGEASLAHFEKVQNYLSALGISFEINDKL----------------- 261

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD---GLVSRFKGQNV 346
                 VRGL+YY   V+E +          K     +V GGGRYD   G++     Q+ 
Sbjct: 262 ------VRGLDYYNKTVFEWVT--------DKLGSQATVCGGGRYDGLVGIIKGNAEQSE 307

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ--MLRTAG 404
           PA GF++G+ RL++ + ++      +     V +       D       Y +   LR   
Sbjct: 308 PAVGFAMGLERLMLLIDAVN--PYQVASWCDVFVIAHP---DYYIDGLKYAESLRLRQDN 362

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +R +M   S+    +Q+K AD+      +I    E +   + IK +A G++    I 
Sbjct: 363 LRVKMA--SATGLKSQMKKADKSGAAYTVIIAEDEVNANQITIKTMATGEQRRAPID 417


>gi|33240229|ref|NP_875171.1| histidyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|39932092|sp|Q7VCG1|SYH_PROMA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|33237756|gb|AAP99823.1| Histidyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 421

 Score =  219 bits (557), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 95/446 (21%), Positives = 172/446 (38%), Gaps = 54/446 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D          ++       +E  G   I TP+LE ++   + + +  D  
Sbjct: 3   NLKTLRGMVDLLPSHSARWQKVETLAIKNFERAGIKEIRTPILELTELFSRGIGEATDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S +D  G+  +LR + TA +AR V +N      P R +  GP+FR E+   GR R
Sbjct: 63  GKEMYSFEDRGGRSCTLRPEGTASVARAVIQNGLLKQGPQRLWYGGPMFRYERPQAGRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIGLH 185
           QF Q  V+  G S+  +DAE+  +  D L  +G++        +   +       K+   
Sbjct: 123 QFHQIGVEFFGLSSVRSDAELISIAWDFLNELGLRNLKLQINTLGTSEDRKNYRSKLISW 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +         L   D L++     +++L  +            A L       +   L+
Sbjct: 183 LE-----NFPELLGEDSLNQLKKNPLRILDSKNSN--IQKLINDAPL-------LGDHLN 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                    L +++                               ++  +VRGL+YY   
Sbjct: 229 QSSINRFESLQKVL-----------------------NTLKIPFSVNQRLVRGLDYYCHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E I                +V GGGRYDGLV +  G + PA GF++G+ RL++ +   
Sbjct: 266 AFEII--------SDDLGAQATVCGGGRYDGLVEQLGGPHAPAIGFAVGMERLLILIGDR 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            ++           +  ++    + ++  +  + LR      E+   S   F  Q K A+
Sbjct: 318 LANE------IHPDVYLINKGEKAEAEALLLARQLRLQDFIVELD-DSGAAFAKQFKRAN 370

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLA 451
           R     AI+ G  E ++G +++K + 
Sbjct: 371 RVGATWAIVIGDEEINKGEIRLKRMK 396


>gi|270047662|pdb|3HRJ|A Chain A, Histidyl-Trna Synthetase From Trypanosoma Cruzi (Histidine
           Complex)
          Length = 439

 Score =  219 bits (557), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 110/483 (22%), Positives = 196/483 (40%), Gaps = 49/483 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +  E  +G  D P + +R R  + D      + +GF+  + P+LE  +   +  
Sbjct: 5   MQK-NMVETEPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKA 63

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E    + +F+     G  ++LR ++T  LAR +     +++ P + Y I   +R E  
Sbjct: 64  GEE--ITEQMFNFITKGGHRVALRPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRYEAI 121

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+  Q ++D VG  + +A+ E+       + ++G+   D  I +N+RK+L  ++E
Sbjct: 122 TRGRRREHYQWNMDIVGVKSVSAEVELVCAACWAMRSLGLSSKDVGIKVNSRKVLQTVVE 181

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           + G+  D    +   V   +DK++K   + V+  L                L    +D +
Sbjct: 182 QAGVTSD----KFAPVCVIVDKMEKIPREEVEAQLA------------VLGLEPTVVDAI 225

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            + LS+     + +            +   EL    E V   GY  + +   +++VRGL 
Sbjct: 226 TTTLSLKSIDEIAQRV------GEEHEAVKELRQFFEQVEAYGYG-DWVLFDASVVRGLA 278

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLI 359
           YYTG V+E            +   F ++ GGGRYD L++ +     +P  GF  G   ++
Sbjct: 279 YYTGIVFEGF---------DREGKFRALCGGGRYDNLLTTYGSPTPIPCAGFGFGDCVIV 329

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L+      +    +  V    +  D           + LR AG  A++ L   K    
Sbjct: 330 ELLQEKRLLPDIPHVVDDV---VIPFDESMRPHALAVLRRLRDAGRSADIILD-KKKVVQ 385

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
              YADR     A++    E  RG +Q+K L +G                      +P+ 
Sbjct: 386 AFNYADRVGAVRAVLVAPEEWERGEVQVKMLREGTGKE---------EGGAERGFAVPLD 436

Query: 480 ELV 482
            LV
Sbjct: 437 RLV 439


>gi|325918498|ref|ZP_08180617.1| histidyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535294|gb|EGD07171.1| histidyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 468

 Score =  219 bits (557), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 142/501 (28%), Positives = 229/501 (45%), Gaps = 69/501 (13%)

Query: 17  DCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKGVFSLQD 75
           +   +E     R+LD IR  Y  +GF P+ETP+ E SD  L K   + +R    V+ +Q 
Sbjct: 2   ELLPREQIAFQRMLDVIRRNYARFGFLPVETPVFELSDVLLTKSGGETER---QVYFVQS 58

Query: 76  DDGQ-----------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
                                 ++LR+DLT PLARYVAE+   + FP R Y++  V+R E
Sbjct: 59  TGALANAAAAADEGAEGGGLPELALRFDLTVPLARYVAEHEHDLSFPFRRYQMQRVYRGE 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GRFR+F QCD+D +G  A +   +  ++         +   D+ + +NNRK+L G 
Sbjct: 119 RAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNRKLLRGF 178

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E +G+   +    +L VLR +DK+DK G   V+  L            +G N+ +EQ+ 
Sbjct: 179 FESLGVAEGE---LQLAVLREVDKIDKRGADYVRDTL----------VGEGFNIAAEQVA 225

Query: 239 IMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
            +++F+++        L +L      V  +    +G  EL  + ELV+  G   +   ++
Sbjct: 226 KILAFVAVRSSGHADALAQLQALEVSVGASATLGEGIAELREVLELVKALGVPESAYCLN 285

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            +I RGL+YYTG VYE  L              GS+  GGRY+ L S +    +P  G S
Sbjct: 286 FSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYESLASHYTKSKLPGVGIS 337

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG++RL   L+         +     ++  +  D   L       + LR  GI  E+ + 
Sbjct: 338 IGLTRLFWQLREAGLIQGIAESSVQAMVALL--DETRLDDALDIARRLRIGGINTEVQM- 394

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             K  G Q +YA R      ++ G  E +RG++ +KDL   ++                 
Sbjct: 395 EPKKVGKQFQYAARAGIRFVVLAGHDELARGVVAVKDLV-REQ----------------- 436

Query: 473 QITIPISELVSTVKKILQENK 493
           Q  +P  EL ST++  L++ +
Sbjct: 437 QFDVPRDELASTLQVELEQAR 457


>gi|270047663|pdb|3HRK|A Chain A, Histidyl-Trna Synthetase From Trypanosoma Cruzi (Histidyl-
           Adenylate Complex)
 gi|270047664|pdb|3HRK|B Chain B, Histidyl-Trna Synthetase From Trypanosoma Cruzi (Histidyl-
           Adenylate Complex)
 gi|284055812|pdb|3LC0|A Chain A, Histidyl-Trna Synthetase From Trypanosoma Cruzi (Histidine
           Complex)
          Length = 456

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 110/483 (22%), Positives = 196/483 (40%), Gaps = 49/483 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +  E  +G  D P + +R R  + D      + +GF+  + P+LE  +   +  
Sbjct: 22  MQK-NMVETEPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKA 80

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E    + +F+     G  ++LR ++T  LAR +     +++ P + Y I   +R E  
Sbjct: 81  GEE--ITEQMFNFITKGGHRVALRPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRYEAI 138

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+  Q ++D VG  + +A+ E+       + ++G+   D  I +N+RK+L  ++E
Sbjct: 139 TRGRRREHYQWNMDIVGVKSVSAEVELVCAACWAMRSLGLSSKDVGIKVNSRKVLQTVVE 198

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           + G+  D    +   V   +DK++K   + V+  L                L    +D +
Sbjct: 199 QAGVTSD----KFAPVCVIVDKMEKIPREEVEAQLA------------VLGLEPTVVDAI 242

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            + LS+     + +            +   EL    E V   GY  + +   +++VRGL 
Sbjct: 243 TTTLSLKSIDEIAQRV------GEEHEAVKELRQFFEQVEAYGYG-DWVLFDASVVRGLA 295

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLI 359
           YYTG V+E            +   F ++ GGGRYD L++ +     +P  GF  G   ++
Sbjct: 296 YYTGIVFEGF---------DREGKFRALCGGGRYDNLLTTYGSPTPIPCAGFGFGDCVIV 346

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L+      +    +  V    +  D           + LR AG  A++ L   K    
Sbjct: 347 ELLQEKRLLPDIPHVVDDV---VIPFDESMRPHALAVLRRLRDAGRSADIILD-KKKVVQ 402

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
              YADR     A++    E  RG +Q+K L +G                      +P+ 
Sbjct: 403 AFNYADRVGAVRAVLVAPEEWERGEVQVKMLREGTGKE---------EGGAERGFAVPLD 453

Query: 480 ELV 482
            LV
Sbjct: 454 RLV 456


>gi|46198668|ref|YP_004335.1| histidyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55980681|ref|YP_143978.1| histidyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|54039668|sp|P62374|SYH_THET2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|62296696|sp|P56194|SYH_THET8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|46196291|gb|AAS80708.1| histidyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55772094|dbj|BAD70535.1| histidyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 421

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 107/467 (22%), Positives = 194/467 (41%), Gaps = 57/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           + A   RG  D   KE+R+  RI+ + R + E  G   + TP+ E +    K +    D 
Sbjct: 1   MTARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +F+ QD  G+ ++LR + TA + R   E+       P R +  GP+FR E+   GR
Sbjct: 61  VRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND----YHIGINNRKILDGILE 180
           +RQF Q + + +GS     DAE  +++ + L+ +G++R            +R   +  L 
Sbjct: 121 YRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLR 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++     + L+E        D  ++  L  +++L  +   D        A L    +  M
Sbjct: 181 EVLSPHREALSE--------DSKERLELNPMRILDSKSERDQ-------ALLKELGVRPM 225

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +    + E+   ++                         S   ++   +VRGL+
Sbjct: 226 LDFLGEEARAHLKEVERHLE-----------------------RLSVPYELEPALVRGLD 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY    +E           ++     ++GGGGRYDGL     G  VP  GF+ G+ R+ +
Sbjct: 263 YYVRTAFEV--------HHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVAL 314

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL++        K      +  +    +++++     + LR   +RAE  L + +     
Sbjct: 315 ALEAEGFGLPEEKGPD---LYLIPLTEEAVAEAFYLAEALRPR-LRAEYAL-APRKPAKG 369

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           L+ A +R    A   G  E   G + +K LA G+++    +    + 
Sbjct: 370 LEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYL 416


>gi|317182443|dbj|BAJ60227.1| histidyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 442

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 135/451 (29%), Positives = 218/451 (48%), Gaps = 30/451 (6%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+ +L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLSKVSVVFQSFGFVPIETPHLEYAQTLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ I IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCISINHRKILNGICEYFGIS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +       +     N   E ++++    + 
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKK-------ECDLDLNTIKEFLEMVQIKQND 224

Query: 247 DLEKSMHELYELVKG-TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                  E    +K      +KG  +L  + +L+     + N  KI  +I RGL YYTG 
Sbjct: 225 LSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGYYTGI 284

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVAL  +
Sbjct: 285 VYETTLNGMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVALSEM 336

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +      +      +       +  S      + LR +GI +E++   ++       YA+
Sbjct: 337 QLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSELYP-EAQKIKKPFSYAN 392

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            R      + G  E     L +K++  G +L
Sbjct: 393 HRGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|317012971|gb|ADU83579.1| histidyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 442

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 133/455 (29%), Positives = 219/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+ +L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAQTLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIVASLKALDL--EDFCVFINHRKILNGICEYFGIS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL-- 244
                +    LR +DKL+K GL GV+  L +             +L S  I  ++  +  
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKKE-----------CDLNSNTIKELLEMVQI 220

Query: 245 ---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
               +   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 QQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNEMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|317508691|ref|ZP_07966346.1| histidyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316253012|gb|EFV12427.1| histidyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 432

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 103/479 (21%), Positives = 176/479 (36%), Gaps = 68/479 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD- 62
           K   + + P+G  D    +         ++    E  G+ P E P+ E +    + + + 
Sbjct: 9   KKAQKLQAPKGVPDYLPPDSVRFVATKRALVEAAELAGYQPAELPVFEDTALYVRGVGES 68

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
            D   K +++  D  G+ ++LR + TA + R V E+       P + +  GP FR E+  
Sbjct: 69  TDIVGKEMYTFPDQGGRSLTLRPEWTAGVVRAVVEHGLDRGQLPVKLWYAGPCFRYERPQ 128

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRK 173
            GR+RQF Q  V+ +G      DAE+  +  + L  +G            D       R+
Sbjct: 129 SGRYRQFQQMGVEAIGVDDPALDAEVVAVADEGLRRLGLGGYRLEINSLGDETCRPEYRE 188

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L   L  + L    +       LR +D         VK  L                  
Sbjct: 189 RLLSFLRGLDLDEATRQRAERNPLRVLDDKRP----EVKAQLV----------------- 227

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                ++V  LS   ++    +   ++G                             +S 
Sbjct: 228 --GAPLLVDCLSDSAKEHFETVLAHLRGL-----------------------GVEYTLSP 262

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YYT   +E +                ++GGGG YDGLV+   GQ +P  GFSI
Sbjct: 263 KLVRGLDYYTKTTFEFVHPG--------LGAQSAIGGGGHYDGLVADLGGQQLPGVGFSI 314

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+ R ++AL + +         G V +  +   S +  +       LR A I  ++  G 
Sbjct: 315 GLERTMLALAAEDI---KDDGAGAVPVFGVALGSAAKERMTRLAGELRKADIGVDLAYGD 371

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      DR      +I G  E +    Q+KD+  G++ +  + +  +    R+A
Sbjct: 372 RAMKAAMRAA-DRSGARFVLILGETELASEHAQLKDMRSGEQSAVPLPDVVAELARRIA 429


>gi|313672835|ref|YP_004050946.1| histidyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939591|gb|ADR18783.1| histidyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 414

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 110/459 (23%), Positives = 187/459 (40%), Gaps = 56/459 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +GF D    EI    ++  S   +++ Y +   + P+LE  +   + + D  D   
Sbjct: 2   FSRVKGFRDIFGDEIPYWQKVEMSFHKVFKRYDYAEFKLPVLEKVEVFQRGIGDTTDIVE 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K +F   D  G  ++LR + TA + R   EN         + Y  GP+FR E+   GRFR
Sbjct: 62  KEMFVFDDKGGDRLALRPEGTASIVRGYIENKLYTGNTISKYYYYGPMFRRERPQKGRFR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--IKRNDYHIGINNRKILDGILEKIGL 184
           QF Q  ++  GSSA + DAE+   M D  +  G     +     I   K      EK+  
Sbjct: 122 QFYQVGIEAFGSSAPSLDAEVIKTMQDIFDECGILDIVSLNINSIGCPKCRPLYKEKLIS 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           +  DK ++        D L++     +++L  + + D     T+ A         MV  L
Sbjct: 182 YLTDKKDQL-----CNDCLNRLNRNPLRVL--DCKIDTCKSATRNA-------PKMVDHL 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +      +  + +                        + + +  I   +VRGL+YY  
Sbjct: 228 CDECSTHFEKTKQFLT-----------------------FFNIKFNIDPFMVRGLDYYVK 264

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E +          +     +VGGGGRYDGL+    G ++P  G++IG+ RL+  +  
Sbjct: 265 TAFEFVT--------DRLGASSAVGGGGRYDGLIKTLGGPDIPGIGYAIGVDRLVTLMME 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +     K++  V         ++L +     ++LR   I          NF NQ K A
Sbjct: 317 KGTPLERPKKVFVVFF------EETLKEGFEIIELLRKNDIPTSFDYEFG-NFKNQFKKA 369

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           DR +    II GT E+ +G++Q+KD+  G +   + +  
Sbjct: 370 DRSSADWVIIIGTTEKEQGIVQLKDMKTGDQFEVKKEEI 408


>gi|29839844|ref|NP_828950.1| histidyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301691|sp|Q824R3|SYH_CHLCV RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|29834191|gb|AAP04828.1| histidyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 430

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 110/472 (23%), Positives = 190/472 (40%), Gaps = 66/472 (13%)

Query: 7   LRAELPRGFADCPT---------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           ++  LP+G  D            +   + +R+ D I  + + YGF  I TP+ E S+   
Sbjct: 1   MKVALPKGVFDIFPYITDAKHMWRHTSLWHRVEDVIHEVCDLYGFSEIRTPVFEKSEVFL 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
                 D   K +++  D  G+ ++LR + TAP+ R   +N  +     + Y I P+FR 
Sbjct: 61  HVGEQSDIVKKEMYTFLDKKGRSLTLRPEGTAPIVRSFIDNPMSQREDNKFYYILPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRK 173
           E+   GR+RQ  Q  V+ +G      DAE+  ++ +   A+G++     +        RK
Sbjct: 121 ERQQSGRYRQHHQFGVEAIGVRHPLRDAEVLSLLWNFYSAIGLQYMQIQLNFLGGSATRK 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
             D +L    L   D L+            ++F    +++L  +   D            
Sbjct: 181 RYDQVLRGYFLQHLDSLSSLS--------KERFNTNLLRILDSKEPEDQE---------I 223

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            +    ++ ++S +  K   E+   +                          +    I+S
Sbjct: 224 IKSAPPILEYVSDEDRKYFDEILSALSAL-----------------------NIPYSINS 260

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YYT  V+EAI  F   +          +GGGGRYDGL++   G   PA GF +
Sbjct: 261 RLVRGLDYYTDVVFEAITTFGGHSYA--------LGGGGRYDGLIAASGGVATPACGFGV 312

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+ R+I  L +  + T          +  +  + ++ S   ++ Q LR+ GI  E+   +
Sbjct: 313 GLERVIQTLLAQGNLTLPSS----HKLRLIPVEPEADSFCFVWAQHLRSLGIPTEVDW-T 367

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            K     LK AD          G  E     L IK+++  +E S   +  E 
Sbjct: 368 HKKLKAALKTADTEKVTFVCPIGERELLSEQLTIKNMSLRQEFSGSKQEVEQ 419


>gi|145356603|ref|XP_001422517.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582760|gb|ABP00834.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 405

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 100/442 (22%), Positives = 187/442 (42%), Gaps = 37/442 (8%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           +R R+ +    R   + +GFD  + P+LE  +   +   +E      +++  D   + ++
Sbjct: 1   MRQRSWLFGHFRECAKVFGFDEFDAPVLESEELFTRKAGEE--ITTQLYNFSDKGDRRVA 58

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           LR +LT   AR + +   ++  P + + IG  +R E+   GR R+  Q ++D VG S   
Sbjct: 59  LRPELTPSFARLILQQGKSLALPAKWFAIGQCWRYERMTRGRRREHYQWNMDIVGVSGVE 118

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
           A+AE+   +    + VG+   D  I +++RK+L  +L + G+  +        V   +DK
Sbjct: 119 AEAELLAAITTFFKRVGVTSADVGIKVSSRKLLQEVLTRFGIDSES----FAPVCVVVDK 174

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
           ++K   + ++  L E              ++ E ++ +++  S+   + +  L       
Sbjct: 175 IEKLPREKIEEELRE------------LGVSDEAVEGILAATSMRTVEELEAL------I 216

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
               +   +L  + E     GY  + +   + +VRGL YYTG V+E            + 
Sbjct: 217 GPDAEAVKDLKKLFEYADAYGYR-DWLVFDACVVRGLAYYTGIVFEGF---------DRA 266

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
               ++ GGGRYD L+    G+N P  GF  G + ++  LK            G V    
Sbjct: 267 GELRAICGGGRYDMLLGALGGENQPMVGFGFGDAVIVELLKDKGLMP--DFSKGDVQDLV 324

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                            LR AG   ++ L   K      K A+R      I+ G  E   
Sbjct: 325 FPLGESLRPAAMRVAAQLRDAGRTVDLIL-EDKKAKWAFKQAERVGAQRVILLGEKEWEA 383

Query: 443 GMLQIKDLAKGKELSREIKNNE 464
           G +++KDLA  +E+  ++++ +
Sbjct: 384 GNVRVKDLASREEVDVKLEDLK 405


>gi|307637866|gb|ADN80316.1| Histidyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325996463|gb|ADZ51868.1| Histidyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325998052|gb|ADZ50260.1| Histidyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 442

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 134/455 (29%), Positives = 220/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+ +L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAQTLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCVSINHRKILNGICEYFGIA- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   VLR +DKL+K GL GV+  L +             +L S  I  ++  + I
Sbjct: 177 -----QVNEVLRIVDKLEKIGLNGVEEELKKE-----------CDLDSNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNDMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +     + +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMNEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|229151511|ref|ZP_04279714.1| Histidyl-tRNA synthetase 1 [Bacillus cereus m1550]
 gi|228632054|gb|EEK88680.1| Histidyl-tRNA synthetase 1 [Bacillus cereus m1550]
          Length = 425

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 130/464 (28%), Positives = 214/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRELALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMGMAFELFRTLNL---EITIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRSDNINYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRVLNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   I +  S+ 
Sbjct: 382 ANKENIPYVLIIGEDELSTETVMLRNMKEGSEVKVPISSLSSYL 425


>gi|145352440|ref|XP_001420556.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580790|gb|ABO98849.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 525

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 115/476 (24%), Positives = 201/476 (42%), Gaps = 48/476 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  D   +E R++  + +  R      GF+  + P+LE  +   +   +E    + +++
Sbjct: 76  SGTRDWYPEEFRLQRWLYEKFRATARATGFEEYDAPVLERQELYKRKAGEE--ITQQMYA 133

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             D DG  ++LR ++T  LAR V     +++ P + + I   +R E    GR R+  Q +
Sbjct: 134 FVDQDGVEVTLRPEMTPTLARMVLGRAQSMMLPLKWFSIPQCWRFETTQRGRKREHYQWN 193

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +D +G  + +A+ E+   + +  +++GI   D  I +N+RK++  +L+  G+  +    +
Sbjct: 194 MDIIGCKSVSAETELLFAVCEFFKSIGITSADVGIKVNSRKVMASVLDSYGITAE----K 249

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V   +DKLDK G   VK  L + +            L +E    +V  L+      +
Sbjct: 250 FAPVCIVMDKLDKIGADAVKAELVDTQ-----------GLPAETAAKIVECLACKTVSDL 298

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               E + G  A + G +EL  + EL    GY  + +   +++VRGL YYTG V+E    
Sbjct: 299 ----EALCGEGADQTGIDELKRLFELAEDYGYG-DWLIFDASVVRGLAYYTGIVFEGF-- 351

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALKSLESSTNN 371
                   +     ++ GGGRYD L+S +     VPA GF  G   ++  LK        
Sbjct: 352 -------DRAGELRAICGGGRYDRLLSLYGAVTEVPACGFGFGDCVIVELLKDKGLLPEL 404

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
            K    +       +     K      M+R  G   +M L   K   +   YA+R     
Sbjct: 405 PKS---IEFVVAAFNEGMQGKAMKAASMIRAGGSDVDMLLEPKKKVASTFDYANRIGARY 461

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL--VSTV 485
            +     E    M++IKDL             +   +    Q+ + +S+L  VS V
Sbjct: 462 IVFVAPQEWENDMVRIKDLR-----------ADYTDKDEEKQLDVKLSDLGRVSEV 506


>gi|227530052|ref|ZP_03960101.1| histidyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350020|gb|EEJ40311.1| histidyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 433

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 106/498 (21%), Positives = 186/498 (37%), Gaps = 73/498 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+  + PRG  D    E  +  ++ +  RN +  +G+  I TP+ E  +   + +
Sbjct: 1   MAKA-KVNYQRPRGTVDILPGESELWQKVENVARNTFAEFGYSEIRTPMFEDYNVFARNV 59

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFR 116
            D  D   K ++   D   + I+LR + TA + R   +N         P + Y +GP+FR
Sbjct: 60  GDTSDIVEKQMYDFHDKGDRHIALRPEGTAGVVRAYVQNKLFGPEYAKPYKVYYMGPMFR 119

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNR 172
            E+   GR RQF Q   + + S +   DAE+ +      + +GI      I        R
Sbjct: 120 YERPESGRQRQFTQIGCEALNSESPQIDAEVILEALMFFKRLGISGLRVAINTLGDKETR 179

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
                 L        D+L++        D  ++     +++L  +  TD           
Sbjct: 180 DNYRQALIDYLKPHYDELSD--------DSKERLYKNPLRVLDSKDETDKK--------- 222

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
                  ++  LS    K    +  ++          NE+                    
Sbjct: 223 IVADAPSILDSLSDYSAKYFDSVKRILDKFNVDYVVDNEM-------------------- 262

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
              VRGL+YYT  ++E +    V         + ++ GGGRY+GL+S+  G +    G+ 
Sbjct: 263 ---VRGLDYYTHTIFEIMSNSSVFG-----GGYTTICGGGRYNGLISQIGGPDEGGIGYG 314

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG+ RL++ L+    S      +     T      ++        + LR  GI+ +    
Sbjct: 315 IGVERLLLLLRQENKSFIPQPGLDLFFATV---GEEADEFAFELMEPLRNMGIKVDKDY- 370

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                G Q+K A RRN     + G  E S   +++               N +  ++   
Sbjct: 371 QGLKVGTQIKEASRRNSKYFAVIGDNEVSSKEIEL---------------NLTEADSSEK 415

Query: 473 QITIPISELVSTVKKILQ 490
              + I EL+S  +K L+
Sbjct: 416 GQKVSIDELLSDPEKYLK 433


>gi|15790871|ref|NP_280695.1| histidyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236617|ref|YP_001689817.1| histidyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|32130146|sp|Q9HNP5|SYH_HALSA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558683|sp|B0R6V2|SYH_HALS3 RecName: Full=Histidine--tRNA ligase
 gi|10581436|gb|AAG20175.1| histidyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727683|emb|CAP14471.1| histidine--tRNA ligase [Halobacterium salinarum R1]
          Length = 432

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 112/449 (24%), Positives = 189/449 (42%), Gaps = 37/449 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF D    E+  R   +D+I +   +YGF  + TP +E ++        E      ++S
Sbjct: 6   KGFRDFYPAEMGPRRAAIDAIEDAAASYGFREVGTPAMERTEMYVDKSGAEIVD--ELYS 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             D  G+ ++L  +LT  +AR V      +  P + Y   P +R E+   GRFR+F Q +
Sbjct: 64  FTDQGGRDVALTPELTPTVARMVVAKQQALSKPIKWYSSRPFWRYEEPQQGRFREFYQTN 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +D  G+S   ADAE+  + AD L ++G+   D+   +++R IL G+L       D +   
Sbjct: 124 LDIFGTSDPRADAEVLAVAADGLTSLGLTGADFEFRVSHRDILGGLLAAFDATVDTEAAI 183

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R +  R                  +       D    A L+ +Q +         L+   
Sbjct: 184 RTVDKR-----------------EKIERAAYLDDLAAAGLSYDQAEQFD----DLLDGDD 222

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +      GT         L  + +     G       +S T  RGL+YYTG V+E    
Sbjct: 223 LDALVSFAGTDRVRDAVANLRNVLDAAETLGVRQ-YCDVSLTTARGLDYYTGVVFECFDS 281

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              +          +V GGGRYD L+ RF GQ  PA G + G + L + L++     ++ 
Sbjct: 282 TGDVG--------RAVFGGGRYDDLIERFGGQPTPAVGVAPGHATLNLLLENAGVLPDDE 333

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 ++   D D    ++       LR  G R +  + + ++FG Q+ YAD       
Sbjct: 334 FTPDYYVLQVGDTD----AEAADVASALRERGNRVDTDI-TGRSFGAQMNYADNVGADTV 388

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +I G  + + G + IK++A G++ +  I 
Sbjct: 389 VIVGEQDLADGNVTIKNMASGEQTTAPIA 417


>gi|93005483|ref|YP_579920.1| histidyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|122989937|sp|Q1QD17|SYH_PSYCK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|92393161|gb|ABE74436.1| histidyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 434

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 98/461 (21%), Positives = 178/461 (38%), Gaps = 54/461 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  +GF D    +      +   + N+   YG++ I  P++E +D   + +    D   
Sbjct: 2   IKAIKGFNDILPAQSAKWLYLESILANVLGRYGYEHIRLPIVEQTDLFARAIGGATDIVE 61

Query: 68  KGVFSLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           K ++S  D       ++LR + TA   R V E+        + + IGP+FR E+   GR+
Sbjct: 62  KEMYSFTDKSDPPTPLTLRPEGTAGAVRAVNEHNLLRGDTPKLWYIGPMFRYERPQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V++ GS+   ADAE+  M     + +G+K             +   L  +G  
Sbjct: 122 RQFHQIGVESFGSALPDADAELIAMTHLMWQELGLK-----------DEMRLELNSLGEI 170

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG-RTDNSGDFTKGANLTSEQIDIMVSFL 244
            +       +V    DK ++      + L     R  +S + +  A L       +  FL
Sbjct: 171 DERHAYREALVTYLTDKQEQLDEDSKRRLTTNPLRILDSKEASTQALLVD--APKLADFL 228

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                               GE+       +   + + G      +I+  +VRGL+YY  
Sbjct: 229 --------------------GEESVAHFEQVQAYLTELG---INFEINPHLVRGLDYYNK 265

Query: 305 CVYEAILGFPVMNE-----KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            V+E +              +   + G +      DG       ++ PA GF++G+ RL+
Sbjct: 266 TVFEWVTDKLGSQATVCAGGRYDGLVGQLKSADNRDGKGDNKPVKSEPAVGFAMGLERLL 325

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR--TAGIRAEMFLGSSKNF 417
           + ++        I +M    +  +    +  S    Y Q LR     +R +M   S+ + 
Sbjct: 326 LLME----VVAPIADMPACDVFVVA-HPEVYSAGISYAQNLRYSRPDLRVKMA--SATSL 378

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
             Q+K AD+    L +I    E     + IKD+  G++ + 
Sbjct: 379 KAQMKKADKSGAALTVIIAQQELDDKTISIKDMQTGEQKTA 419


>gi|15612180|ref|NP_223832.1| histidyl-tRNA synthetase [Helicobacter pylori J99]
 gi|7674358|sp|Q9ZK27|SYH_HELPJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|4155714|gb|AAD06696.1| HISTIDYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 442

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 134/455 (29%), Positives = 219/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+ +L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAQTLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCVSINHRKILNGICEYFGIA- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   VLR +DKL+K GL GV+  L +             +L S  I  ++  + I
Sbjct: 177 -----QVNEVLRIVDKLEKIGLNGVEEELKKE-----------CDLDSNTIKDLLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNDMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|118431143|ref|NP_147398.2| histidyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|150421678|sp|Q9YEB2|SYH_AERPE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|116062467|dbj|BAA79634.2| histidyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 435

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 147/485 (30%), Positives = 241/485 (49%), Gaps = 59/485 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R   PRGF D P + + +R R+L  +  ++E+YGFDP++TP +EY ++L     +E   +
Sbjct: 5   RPRPPRGFRDFPPEVMILRKRLLSRLERVFESYGFDPLDTPAVEYWETLSGKYGEEAE-S 63

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           + ++  QD   G+W +LRYDLT PLAR+VA N   +  P + Y IG V+R+E+   GR+R
Sbjct: 64  RLIWRFQDPWSGRWYALRYDLTVPLARFVASN-PGLPMPFKRYHIGKVWRHEEPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+QCD D VGS    ADAE+  +  D+++A+G+    + + +N+R++L G+ E      
Sbjct: 123 EFVQCDADIVGSPYPEADAEIVSLAVDSIDALGLPG--FRVRVNDRRLLAGVFE-----E 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +   +  L + RAIDKLDK G++GV+  L                L    ++ ++  +S 
Sbjct: 176 ELGFDNPLPIYRAIDKLDKIGVEGVRRELER------------LGLPGSTVERIMEIISW 223

Query: 247 DLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                + +  +           +  + L  +  L         R+++  ++VRGL+YYTG
Sbjct: 224 RGRPGEVLESVRRGYGSNEKVREALDHLEEMLSLADDK-----RVELDMSLVRGLDYYTG 278

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            + E +L  P           GSV GGGRYDGLV  F G+++PATG SIGI R+I A   
Sbjct: 279 PILEVVLDEP---------RIGSVAGGGRYDGLVGMFAGRDIPATGVSIGIERIIDAGLE 329

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L   + ++K +  V +  +D             ++LR  G+   + L  +     Q + A
Sbjct: 330 LGVYSLDVKTVAQVAVVVLDR--RYYRYAWEAARILRRGGLNVRIDLSRASG-QVQRRKA 386

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
            R   P+    G  E   G L +   AKG+ ++                  +P+ E V  
Sbjct: 387 SRLGIPVLAFVGAKEAEGGFLTLYSAAKGERVA------------------VPLGEAVKA 428

Query: 485 VKKIL 489
           V+++L
Sbjct: 429 VERLL 433


>gi|293610297|ref|ZP_06692598.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827529|gb|EFF85893.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 430

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 93/475 (19%), Positives = 167/475 (35%), Gaps = 70/475 (14%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDILPSQTVAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILE 180
           Q  V+  G +    +AE+ +M A   + +G             +       R  L   L 
Sbjct: 128 QFGVETFGVATPDIEAEVILMTARLWKRMGVDHMVQLELNTLGEKDERTEYRNALVAFLN 187

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +     D+            D   +     +++L  +  +              E    +
Sbjct: 188 EHKDALDE------------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKL 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             FL  D      +L + +                            +  I+  +VRGL+
Sbjct: 227 YDFLKEDSLSHFQQLQDYLTAA-----------------------GVKFVINQKLVRGLD 263

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E                 G+V GGGRYDGLV + KG+   +         +  
Sbjct: 264 YYNKTVFEWTTTA--------LGSQGTVCGGGRYDGLVGQLKGKPDQSVPAVGFGMGMER 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKN 416
            L  +E            +      +    +K  +  + LR     A     +  GS  +
Sbjct: 316 LLLLVEQVEQAQVIRDCEVFLVA--EPAYQTKALILAEQLRDQLEAANSSIRIKTGSQGS 373

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             +Q+K AD+     A+I G  E     L IK+LA  ++    +     +   + 
Sbjct: 374 MKSQMKKADQAGAVYAMILGEREWEAQQLAIKELATAEQSQVALAELVPFLIEKF 428


>gi|297380372|gb|ADI35259.1| histidyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 442

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 133/455 (29%), Positives = 217/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+ +L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAMQKAQLLSKVSVVFQSFGFVPIETPHLEYAQTLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCVSINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +             +L    I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLNGVEEELKKE-----------CDLNLNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKGYNKNLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNSMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++    +      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EVQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|218235543|ref|YP_002368034.1| histidyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218163500|gb|ACK63492.1| histidine--tRNA ligase [Bacillus cereus B4264]
          Length = 425

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 129/464 (27%), Positives = 213/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   +  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRELALRYDLTIPFAKVVAMN-PNLRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMGMAFELFRTLNL---EITIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLTIADFKETF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNINYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   I +  S+ 
Sbjct: 382 ANKENIPYVLIMGEDELSTETVMLRNMKEGSEVKVPISSLSSYL 425


>gi|210135349|ref|YP_002301788.1| histidyl-tRNA synthetase [Helicobacter pylori P12]
 gi|229558685|sp|B6JN30|SYH_HELP2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|210133317|gb|ACJ08308.1| histidyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 442

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 133/455 (29%), Positives = 217/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+ +L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAQTLLPDTSSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E   +  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCVSINHRKILNGICEYFRIS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV+  L +             +L S  I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLDGVEEELKKE-----------CDLNSNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNEMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ R      + G  E     L +K++  G +L
Sbjct: 389 SYANHRGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|268323923|emb|CBH37511.1| histidyl-tRNA synthetase [uncultured archaeon]
          Length = 442

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 93/461 (20%), Positives = 181/461 (39%), Gaps = 38/461 (8%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            ++R E  RG  D    E++ R  +   +R+I + +G++ I TP  E ++       +E 
Sbjct: 13  KEMRIERARGTRDFMPAEMQKRRIMETKMRDIADKWGYEEIRTPSFERAELFTLKSGEEI 72

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
                ++  +D  G+ ++LR +LTAP+ R           P + Y  G  FR E+    R
Sbjct: 73  LN--ELYEFKDKGGRHLALRPELTAPVTRMYVNELKMAPKPTKVYYFGNCFRYEEPQKAR 130

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F Q   + +GS    + AE+  +      ++ +K     + + +  ++  +L    +
Sbjct: 131 YREFWQFGTEIIGSDRPESQAEIIALAYFIANSLCVKAE---LHVGHVGLIREVLRTANV 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                                  +  V  L+ +G  ++   F       +E ID ++  +
Sbjct: 188 VE-------------------NSINQVMRLIDKGERESVIAFLSEIGTRTELIDDLIYLV 228

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +  ++++ E  +              L  + +L+    Y +    ++  I RGL+YYTG
Sbjct: 229 DLSGKEALQEARDR----NIIASDSAALNELEQLLELLEYYNVDYTLNLGIARGLDYYTG 284

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E            K      + GGG Y  L + F G + P+TGF+ G  RL      
Sbjct: 285 MVFEMY------EVGGKLGAQNQICGGGSY-RLAALFGGDDTPSTGFAFGFDRLAEIYP- 336

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           LE+      ++  V I   + D   + +       LR             ++   QL YA
Sbjct: 337 LETDDLKSIKVVVVPIRAKEADPKVMKEAITIATTLRA--FFHTYIDVMGRSISAQLSYA 394

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +      A++ G  E   G + +++L  G++    ++    
Sbjct: 395 NSIPASFAVLVGKKEVEEGKVTLRNLESGEQEKLGVEECVE 435


>gi|118594983|ref|ZP_01552330.1| histidyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440761|gb|EAV47388.1| histidyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 421

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 105/475 (22%), Positives = 189/475 (39%), Gaps = 63/475 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  +GF D   +  ++      ++ ++ + Y +  I  P++E +D     +
Sbjct: 1   MAK----KIQSIKGFYDVAPERQKLWRYFEATVLSVLDQYHYQEIGLPIVESTDLFISGV 56

Query: 61  P-DEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
               D   K ++S  D  +   ++LR + TA   R V E   T   P + +  GP+FR+E
Sbjct: 57  GTQTDIVEKEMYSWIDPLNSDNLTLRPEGTAGCVRAVIEGSLTYNGPTKLFYRGPMFRHE 116

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDG 177
               GR RQF Q  V+  G S  ++DAE  ++++   +A+G+      +  I +    + 
Sbjct: 117 NVQKGRQRQFHQIGVEAFGLSDPSSDAEQILLLSRLWKALGLTNITLELNSIGDPADREA 176

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             + +  + +D   E        D   +     +++L  +  +                 
Sbjct: 177 YRKVLITYFEDNKAELD-----EDAQRRLYDNPLRILDSKNPSMQDM---------LNSA 222

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +   +S +       L + +          + L                       VR
Sbjct: 223 PKLRESISAEARTHFDSLCQTLDNHGVPYILSDRL-----------------------VR 259

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   VYE +               G+V GGGRYD LV +  G   PA GF+IGI R
Sbjct: 260 GLDYYNRTVYEWVTKD--------LGSQGTVAGGGRYDYLVEKLGGVTTPACGFAIGIER 311

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           +I+ L+S         +     I  ++   ++ SK  M  + LR     I   M      
Sbjct: 312 IILLLESKALDGLMNPD-----IYIVNLGDEARSKALMIAESLRDHHYNIAVNM---EGA 363

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREA 469
           +F +Q+K AD+ +  +A I G  E  +  +QIK L  +G ++S + K+  +   +
Sbjct: 364 SFKSQMKKADKSHANIAFIIGEDEVEKKCIQIKLLREEGSQVSVKDKDVLTHLTS 418


>gi|2392059|pdb|1ADJ|A Chain A, Histidyl-Trna Synthetase In Complex With Histidine
 gi|2392061|pdb|1ADJ|B Chain B, Histidyl-Trna Synthetase In Complex With Histidine
 gi|2392063|pdb|1ADJ|C Chain C, Histidyl-Trna Synthetase In Complex With Histidine
 gi|2392065|pdb|1ADJ|D Chain D, Histidyl-Trna Synthetase In Complex With Histidine
 gi|2392067|pdb|1ADY|A Chain A, Histidyl-Trna Synthetase In Complex With
           Histidyl-Adenylate
 gi|2392068|pdb|1ADY|B Chain B, Histidyl-Trna Synthetase In Complex With
           Histidyl-Adenylate
 gi|2392069|pdb|1ADY|C Chain C, Histidyl-Trna Synthetase In Complex With
           Histidyl-Adenylate
 gi|2392070|pdb|1ADY|D Chain D, Histidyl-Trna Synthetase In Complex With
           Histidyl-Adenylate
 gi|14719709|pdb|1H4V|B Chain B, Histidyl-Trna Synthetase From Thermus Thermophilus (Ligand
           Free)
          Length = 421

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 106/467 (22%), Positives = 193/467 (41%), Gaps = 57/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           + A   RG  D   KE+R+  RI+ + R + E  G   + TP+ E +    K +    D 
Sbjct: 1   MTARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR 124
             K +F+ QD  G+ ++LR + TA + R   E+       P R +  GP+FR E+   GR
Sbjct: 61  VRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND----YHIGINNRKILDGILE 180
           +RQF Q + + +GS     DAE  +++ + L+ +G++R            +R   +  L 
Sbjct: 121 YRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLR 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++     + L+E        D  ++     +++L  +   D        A L    +  M
Sbjct: 181 EVLSPHREALSE--------DSKERLEENPMRILDSKSERDQ-------ALLKELGVRPM 225

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +    + E+   ++                         S   ++   +VRGL+
Sbjct: 226 LDFLGEEARAHLKEVERHLE-----------------------RLSVPYELEPALVRGLD 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY    +E           ++     ++GGGGRYDGL     G  VP  GF+ G+ R+ +
Sbjct: 263 YYVRTAFEV--------HHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVAL 314

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL++        K      +  +    +++++     + LR   +RAE  L + +     
Sbjct: 315 ALEAEGFGLPEEKGPD---LYLIPLTEEAVAEAFYLAEALRPR-LRAEYAL-APRKPAKG 369

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           L+ A +R    A   G  E   G + +K LA G+++    +    + 
Sbjct: 370 LEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYL 416


>gi|254779738|ref|YP_003057844.1| histidyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001650|emb|CAX29812.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Helicobacter pylori B38]
          Length = 442

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 133/455 (29%), Positives = 220/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+++L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAEALLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCVSINHRKILNGICEYFGIS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL-- 244
                +   VLR +DKL+K GL GV+  L +             +L S  I  ++  +  
Sbjct: 177 -----QVNEVLRIVDKLEKIGLDGVEEELKKE-----------CDLDSNTIKELLEMVQI 220

Query: 245 ---SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
               +   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 QQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNDMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|255321136|ref|ZP_05362302.1| histidyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262380175|ref|ZP_06073330.1| histidyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255301690|gb|EET80941.1| histidyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298369|gb|EEY86283.1| histidyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 431

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 99/476 (20%), Positives = 173/476 (36%), Gaps = 70/476 (14%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E ++   + + D  D   K ++
Sbjct: 8   KGFNDILPAQTPAWRRLEQHLLSLMDAYGYQQIRLPIVEQTNLFKRSIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + IGP+FR EK   GR+RQF 
Sbjct: 68  TFLDKGNPPESLTLRPEGTAGCVRAMLEHNLLRGATPRVWYIGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILE 180
           Q  V+  G +    DAE+ +M A   + +G             +       R  L G LE
Sbjct: 128 QFGVETFGVATPDMDAELILMTARLWKRMGVAEKVQLELNTLGEADERAAYRAALVGFLE 187

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 D+            D   +     +++L  +     S           E    +
Sbjct: 188 SHKADLDE------------DSQRRLTTNPLRILDSKDAKTQS---------ILENAPKL 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             F+                    GE+      ++ + +  +G       I+  +VRGL+
Sbjct: 227 HDFM--------------------GEETLAHFNLLQQYLTDAG---ISFVINQKLVRGLD 263

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E                 G+V  GGRYD LV + KG+   +         +  
Sbjct: 264 YYNKTVFEWTTT--------HLGSQGTVCAGGRYDSLVGQLKGKADQSVPAVGFAMGMER 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKN 416
            L  LE   +N       +      +     K  +  +  R     A     +  GS  +
Sbjct: 316 LLLLLEQVEDNTAVRDCEIFLLA--EPAYQGKALVMAEQFRNQFEAANSPFRLKTGSQGS 373

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             +Q+K AD+     A+I G  E     L +K L   +++  EI N   +   ++A
Sbjct: 374 MKSQMKKADQSGAIFAVILGQREWENRKLTVKRLENAEQVEVEIDNLTPYLIEQLA 429


>gi|319937181|ref|ZP_08011588.1| histidyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807547|gb|EFW04140.1| histidyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 426

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 102/467 (21%), Positives = 192/467 (41%), Gaps = 54/467 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +    PRG  D  +       ++   +R I  NY    + TP+ E+++   + + D  D 
Sbjct: 1   MAYSAPRGTVDILSDNSGQWQQLEQLLRTICANYNVKEMRTPIFEHTELFTRAVGDTTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI--VFPCRTYRIGPVFRNEKHGPG 123
             K +++ +D  G+ ++LR + TA +AR   EN          + Y +GP+FR E+   G
Sbjct: 61  VTKEMYTFEDKKGRSMTLRPEGTAGIARSYVENKLYALPEKLQKYYYMGPMFRYERPQSG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKI 182
           R RQF Q  V+ +G  +   D E  ++    +EA+G++    HI    + +  D   E +
Sbjct: 121 RQRQFHQFGVEMIGLESPYVDVEAMVLAVTVVEALGLQDITLHINSLGDEESRDAYREAL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H +  + +        D   ++    +++L  + + D    F   A  T       + 
Sbjct: 181 KKHFEPVIKDL-----CYDCQQRYEKNPLRIL--DCKVDREHPFMNDAPHT-------ID 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +LS + +    ++ EL+                               I + +VRGL+YY
Sbjct: 227 YLSENAKAHFDKVCELLDDLE-----------------------IEYVIDTNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +  V+E I   P +               GRY+ L+S   G +VP  GF+ G+ RL++A 
Sbjct: 264 SHTVFEVISDDPKLGAGATVGGG------GRYNTLISELGGPDVPGVGFAFGMERLLIA- 316

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +++   E   + +  M   +++         MLR  G   +M     +    Q K
Sbjct: 317 -----NSDVDAEEDGLDVYVMPLGNEAKDLAMQIVTMLRANGFTCDMDQC-DRGLKGQFK 370

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            ADR +   ++I G  E  + ++ +K     ++    ++N  ++ EA
Sbjct: 371 SADRFHAHFSMIIGEEEVKKEVVNMKCNHSKEQNEVLLENIVAFIEA 417


>gi|317011393|gb|ADU85140.1| histidyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 442

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 135/455 (29%), Positives = 219/455 (48%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+  L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAQMLLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +  T+  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCVSINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   VLR +DKL+K GL GV+  L +             +L S  I  ++  + I
Sbjct: 177 -----QVNEVLRIVDKLEKIGLNGVEEELKKE-----------CDLDSNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNDMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|229197435|ref|ZP_04324162.1| Histidyl-tRNA synthetase 1 [Bacillus cereus m1293]
 gi|228586059|gb|EEK44150.1| Histidyl-tRNA synthetase 1 [Bacillus cereus m1293]
          Length = 428

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 129/464 (27%), Positives = 217/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 4   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 64  LKEIYTLQDQGKRGLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 123 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 180 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 223

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 224 CLQLSIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 281

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++  F+G ++  P  G S G+  +  AL  
Sbjct: 282 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDDMNYPTVGISFGLDVIYTALSQ 333

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     +     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 334 KE----TVSSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 384

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   + +  ++ 
Sbjct: 385 ANKENIPYVLIIGEEELSTETVVLRNMKEGSEVKVPLSSLSNYL 428


>gi|196043116|ref|ZP_03110355.1| histidyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|229185569|ref|ZP_04312749.1| Histidyl-tRNA synthetase 1 [Bacillus cereus BGSC 6E1]
 gi|196026600|gb|EDX65268.1| histidyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|228597964|gb|EEK55604.1| Histidyl-tRNA synthetase 1 [Bacillus cereus BGSC 6E1]
          Length = 425

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 128/464 (27%), Positives = 215/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP+L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPMLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLRDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILESINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 ER----TSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  +    T    +G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLQLSIDDFKDAF-NTPLVAEGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    + P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMSYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +           Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LHCLQIAQQLRSTTTLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E     + ++++ +G E+   + +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSSLSNYL 425


>gi|260549072|ref|ZP_05823293.1| histidyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407800|gb|EEX01272.1| histidyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 430

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 94/473 (19%), Positives = 169/473 (35%), Gaps = 66/473 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDVLPTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ ++ A   + +G+        +     + R      L     
Sbjct: 128 QFGVETFGVATPDIDAELILLTARLWKRMGVDHMVQLELNTLGETDERTEYRNALVAFLN 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L+E        D   +     +++L  +  +              E    +  FL
Sbjct: 188 EHKDALDE--------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKLHDFL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D      +L + +                            +  I+  +VRGL+YY  
Sbjct: 231 KEDSLNHFQQLQDYLTAA-----------------------GVKFVINQKLVRGLDYYNK 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 G+V  GGRYDGLV + KG+   +         +   L  
Sbjct: 268 TVFEWTTTA--------LGSQGTVCAGGRYDGLVGQLKGKADQSVPAVGFAMGMERLLLL 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFLGSSKNFG 418
           LE            +      +    +K  +  + LR         IR +   GS  +  
Sbjct: 320 LEQVEKAEIVRDCEVFLVA--EPAYQAKALVLAEQLRDQLEATNSNIRIKT--GSQGSMK 375

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           +Q+K AD+     A+I G  E     L +K+LA  ++    +     +   + 
Sbjct: 376 SQMKKADQAGAVYAMILGEREWEAQQLALKELATAEQTQVALAELVPFLIEKF 428


>gi|228915931|ref|ZP_04079506.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228843749|gb|EEM88823.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 426

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 129/458 (28%), Positives = 214/458 (46%), Gaps = 42/458 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D   K +++
Sbjct: 8   KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 67

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR+FIQCD
Sbjct: 68  LQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 126

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  +     
Sbjct: 127 VDIVGVESVMAEAELMSMAFELFQTLNL---ELTIQYNNRKLLNGILQAINIPTE----L 179

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V+ ++DK++K G+ GV+  + E              ++ E  D + + +   L+ ++
Sbjct: 180 TSDVILSLDKIEKIGIDGVRKDVLER------------GISKEMADTICNTVLSCLKLTI 227

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  E          G NEL  + + +   G N N I  +  + RGL  YTG VYE  L 
Sbjct: 228 ADFKEAF-NNPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTVYEIFLK 285

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
             ++           +G GGRYD ++   R    N P  G S G+  +  AL   E    
Sbjct: 286 DSLITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALAQKE---- 333

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYADRRNC 429
            +     V I  +  +     +     Q LR+   ++ E+ L + +     L YA++ N 
Sbjct: 334 TVSSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNYANKENI 388

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           P  +I G  E S   + ++++ +G E+   I +  ++ 
Sbjct: 389 PYVLIIGEEELSTNTVMLRNMKEGSEVKVPISSLSNYL 426


>gi|313237498|emb|CBY19939.1| unnamed protein product [Oikopleura dioica]
          Length = 513

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 118/481 (24%), Positives = 201/481 (41%), Gaps = 39/481 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  +  +G  D    E+ IR  + D I+ +++ +G + I+TP+ E +D L     ++   
Sbjct: 56  LVLKNAKGTIDQGPAEMAIREELFDKIKAVFKTHGAETIDTPVFELTDILTNKYGED--- 112

Query: 67  NKGVFSLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GP 122
           +K ++++   +G  + +SLRYDLT P AR+VA+N    +   + Y I  V+R ++     
Sbjct: 113 SKLIYNVAKPEGSDESLSLRYDLTVPFARFVAQNK---IQSIKRYHIAKVYRRDQPYMTK 169

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+R+F QCD D  GS+      +   +   T     +   +  I +N+R+ILDGI    
Sbjct: 170 GRYREFYQCDFDIAGSNYAPMFPDAECVKIATEIIDSLDIANSRIKLNDRRILDGIFSAC 229

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G                 D L +     V  L     T    + +    L+ E  D +  
Sbjct: 230 G---------------CPDNLFRAACAEVDKLDKLPWTAPENEVSVRCGLSEECADKIGR 274

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           F+     + + +      ++    +  +G  E+ V  E +       +++    ++ RGL
Sbjct: 275 FVQKSGAQELVKELLADPVLSANKSATEGLKEMSVFLEYLEAWNIM-DKVSFDLSLARGL 333

Query: 300 EYYTGCVYEAILGFPVMN----EKQKPVVFGSVGGGGRYDGLVSR----FKGQNVPATGF 351
           +YYTG +YE ++     +    E    V  GSV  GGRYDGLV          NVP  G 
Sbjct: 334 DYYTGVIYEIVMTPSEQDIKNAEAGTTVGVGSVAAGGRYDGLVGSLVGGKGKSNVPCVGI 393

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           S G+ RL   LK  +    +        +  M    + L         L  AGI AE   
Sbjct: 394 SFGVERLYTLLKRKK--EASSIRTTATQVFVMSGQKNMLKHRAAILNDLWEAGIPAETSY 451

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             +    N L+  + RN P  I+ G  E   G++ ++ +    E      +     + ++
Sbjct: 452 KPNPKLLNDLQSCESRNIPWGIVFGEREIEEGIVLLRSIISRDEEKVTRSDLVKVLKEKL 511

Query: 472 A 472
           A
Sbjct: 512 A 512


>gi|148545036|ref|YP_001272406.1| histidyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184154370|ref|YP_001842711.1| histidyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364184|ref|ZP_03848281.1| histidyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325683387|ref|ZP_08162903.1| histidine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148532070|gb|ABQ84069.1| histidyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225714|dbj|BAG26231.1| histidyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070823|gb|EEI09149.1| histidyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977737|gb|EGC14688.1| histidine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 433

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 109/498 (21%), Positives = 191/498 (38%), Gaps = 73/498 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+  + PRG  D    E  +  ++ +  RN +  +G+  I TP+ E  +   + +
Sbjct: 1   MAKA-KVNYQRPRGTVDILPGESELWQKVENIARNTFAEFGYSEIRTPMFEDYNVFARNV 59

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFR 116
            D  D   K ++   D   + ++LR + TA + R   +N         P + Y +GP+FR
Sbjct: 60  GDTSDIVEKQMYDFHDKGERHVALRPEGTAGVVRAYVQNKLFGPEYPKPYKVYYMGPMFR 119

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNR 172
            E+   GR RQF Q   + + S +   DAE+ +      + +GI      I        R
Sbjct: 120 YERPESGRQRQFTQIGCEALNSESPQIDAEVILEALMFFKRLGITELRVAINTLGDKETR 179

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
                 L        D+L++        D  ++     +++L  +  TD           
Sbjct: 180 DNYRQALIDYLKPHYDELSD--------DSKERLYKNPLRVLDSKDETDKK--------- 222

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
                  ++  LS    K    + +++          NE+                    
Sbjct: 223 IVANAPSILDSLSGYSAKYFDSVKKILDKFNVDYVVDNEM-------------------- 262

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
              VRGL+YYT  ++E +   PV         + ++ GGGRY+GL+S+  G +    G+ 
Sbjct: 263 ---VRGLDYYTHTIFEIMSNSPVFG-----GGYTTICGGGRYNGLISQIGGPDEGGIGYG 314

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG+ RL++ L+    S      +    +T  +   +         + LRT GI+ +    
Sbjct: 315 IGVERLLLLLREENKSFIPQPGLDLFFVTVGEKADNF---AFELMEPLRTMGIKVDKDY- 370

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                G Q+K A RRN     + G  E                LS+EI+ N +  ++   
Sbjct: 371 QGLKVGTQIKEASRRNSRYFAVIGDKEI---------------LSKEIELNFTESDSSEE 415

Query: 473 QITIPISELVSTVKKILQ 490
              + I EL+   +K L+
Sbjct: 416 GKKVSIDELLGNPEKYLK 433


>gi|162452821|ref|YP_001615188.1| hypothetical protein sce4545 [Sorangium cellulosum 'So ce 56']
 gi|229558733|sp|A9F907|SYH_SORC5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|161163403|emb|CAN94708.1| hisS [Sorangium cellulosum 'So ce 56']
          Length = 428

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 96/473 (20%), Positives = 171/473 (36%), Gaps = 61/473 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +     RG  D   +E+   +++  + R   E +G+  + TPLLE ++     + +  D 
Sbjct: 1   MELRAVRGMNDILPEEVERWHKLEGAFRLHAELHGYAEVRTPLLEPTELFRHQMGETTDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGR 124
             K ++S +   G  +++R + TA  AR   E+         R Y +GP+FR E+   GR
Sbjct: 61  VEKEMYSFE-RHGDHLTVRPEGTAGAARAYVEHAVHAKEPVTRWYYLGPMFRGERPAKGR 119

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILE 180
           +RQF Q   +  G      DAE   ++A  L+ +G+     H+        R+     L 
Sbjct: 120 YRQFYQAGCELFGDPGPLCDAETIDLVAGFLQRIGVGEFVVHVNSLGSAGTRERYREALL 179

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                   +L+E        D   +     +++L  + + D+           S     +
Sbjct: 180 AHYTPRKAELSE--------DSQRRLEKNPLRILDSKDQRDHE---------VSRDAPSI 222

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L          +   +                               +  ++VRGL+
Sbjct: 223 LDLLDDADRAHWDGVRRCLD-----------------------VLGVNYVVDRSLVRGLD 259

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT  ++E                  ++ GGGRYD +V+   G +VPA GF++G      
Sbjct: 260 YYTRTLFEV------KATAGDLGAQSTLAGGGRYDAMVAGLGGPSVPAIGFAMG------ 307

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            ++ L +                        +  +  + LR  G+  E+  G        
Sbjct: 308 -MERLLTMMPGASPRRRPGCFLAPLGQSGADQALVLAKQLRALGVPVELD-GRGGRLKAM 365

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           L+ AD     L +I G  E  RG+LQIKDL    +    ++        R  +
Sbjct: 366 LRRADSLGARLCVILGDAEIERGVLQIKDLVAHVQEEIPLEGAARVLADRALE 418


>gi|229162206|ref|ZP_04290175.1| Histidyl-tRNA synthetase 1 [Bacillus cereus R309803]
 gi|228621256|gb|EEK78113.1| Histidyl-tRNA synthetase 1 [Bacillus cereus R309803]
          Length = 436

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 127/462 (27%), Positives = 213/462 (46%), Gaps = 42/462 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFEQYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRELALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 ER----TSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G + N I  +  + RGL  YTG V
Sbjct: 221 CLKLTIADFKEAF-NNQLVTDGVNELQQLQQYLIALGISENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +           Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADLFIIPLGTE----LPCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++ N P  +I G  E S   + ++++ +G E+   + + ++
Sbjct: 382 ANKENIPYVLIIGEEELSTNTVMLRNMKEGSEVKVPLSSLKN 423


>gi|225024247|ref|ZP_03713439.1| hypothetical protein EIKCOROL_01119 [Eikenella corrodens ATCC
           23834]
 gi|224943272|gb|EEG24481.1| hypothetical protein EIKCOROL_01119 [Eikenella corrodens ATCC
           23834]
          Length = 430

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 102/475 (21%), Positives = 178/475 (37%), Gaps = 76/475 (16%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               + I      +G+  I TP++E +    + +
Sbjct: 4   KIQAVKGMNDLLPVEQKDFKLTAAFWQAFENRIGQWAHRFGYRQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +    +SLR + TA   R V E+        + + +GP+FR E
Sbjct: 64  GEDTDVVGKEMYTFADSNDTLSLSLRPEGTASCLRAVVEHNLLYNGGQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  V+ +G      DAE+  M AD    +GI +          +     
Sbjct: 124 RPQKGRYRQFHQVGVEALGFEGPDIDAEIIAMCADLWRELGISQYLTLEINSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L G L++     D+            D L +     +++L  +    +  +   G
Sbjct: 184 AHRAALVGYLKQHEAALDE------------DSLRRMHTNPLRVLDSK--NPDLQEICNG 229

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A         +  +L             L+ G                            
Sbjct: 230 A-------PRLADYLGEASRAHYAGFKALLDGLGIA-----------------------Y 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +  +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ 
Sbjct: 260 VENHRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++G+ RL++ +        N++      I  +    D+L     Y    R AG    +
Sbjct: 312 GFAMGVERLLLLVHEYG----NLQADAAPDIYVIHQGGDTLLPSMQYAAAARAAGFSV-L 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK-ELSREIKNN 463
               S+    Q+K AD     +A+I G GE + G   +KD+ +G+ ++S    + 
Sbjct: 367 QHSGSQKLAAQMKKADASGAKVALIVGEGELAEGKASLKDMQQGRGQVSVPAADL 421


>gi|325294499|ref|YP_004281013.1| histidyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064947|gb|ADY72954.1| Histidyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 410

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 99/455 (21%), Positives = 177/455 (38%), Gaps = 56/455 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  RG  D    E     +++++ +N+    GF  +  P+ E +    + + +  D 
Sbjct: 1   MEFKAVRGVEDLIPPESEKFEKVVETFKNVVNKAGFREVILPIFEEAGLFSRSVGETTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K ++  +D  G+ I+LR + TA   R   E+      P  + + +GP+FR E+   GR
Sbjct: 61  VQKEMYVFEDKGGRVIALRPEGTASAVRAYIEHGVFAKEPFTKWFYVGPMFRFERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q   +  G S+  ADAE+  +  D L+A+ I  +     I   K        +  
Sbjct: 121 KRQFFQAGCEVFGLSSPGADAEVIKVACDILKALKIDYSLELNSIGCEKCRSEYKRALIE 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             + +  +        D + +F    +++L  +          +       +   +  FL
Sbjct: 181 FLESRKEKL-----CEDCIKRFERNPLRVLDCK---------VETCQNIVAEAPKITDFL 226

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +  +   +L E +                            +   +  +VRGL+YYT 
Sbjct: 227 CNECSEHFEKLKEYLA-----------------------LLDVKFVENPFLVRGLDYYTK 263

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E         + +K     ++  GGRYD LVS+  G   PA GF++G+ R ++ L  
Sbjct: 264 TVFEF--------KSKKLGAQSTILAGGRYDKLVSQLGGPETPALGFAMGVDRAMLLLPE 315

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           +E             I  +     +  +     ++LR  G R E+      +F  Q+K A
Sbjct: 316 IEEKRE--------GIFLVTRGEKAYKEGLKLLRLLREKGFRVEIDHRQG-SFKAQMKAA 366

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           DR      +I G  E   G    K+L  GK+   E
Sbjct: 367 DRVKAKYVVIIGESEVEEGFFSFKELETGKQERVE 401


>gi|208435085|ref|YP_002266751.1| histidyl-tRNA synthetase [Helicobacter pylori G27]
 gi|229558686|sp|B5Z8I6|SYH_HELPG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|208433014|gb|ACI27885.1| histidyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 442

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 133/455 (29%), Positives = 218/455 (47%), Gaps = 38/455 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+++L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAEALLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIIASLKALDL--EDFCVSINHRKILNGICEYFGVS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR +DKL+K GL GV   L +             +L S  I  ++  + I
Sbjct: 177 -----QVNEALRIVDKLEKIGLDGVGEELKKE-----------CDLNSNTIKELLEMVQI 220

Query: 247 DLE-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                   +   ++  L       +KG  +L  + +L+     + N  KI  +I RGL Y
Sbjct: 221 KQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGY 280

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE  L              GSV  GGRYD L   F  +N+   G SIGI RLIVA
Sbjct: 281 YTGIVYETTLNDMK--------SLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVA 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  ++      +      +       +  S      + LR +GI +E++   ++      
Sbjct: 333 LSEMQLLD---ERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKPF 388

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            YA+ +      + G  E     L +K++  G +L
Sbjct: 389 SYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQL 423


>gi|30263285|ref|NP_845662.1| histidyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47528660|ref|YP_020009.1| histidyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186135|ref|YP_029387.1| histidyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|254723303|ref|ZP_05185091.1| histidyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254738370|ref|ZP_05196073.1| histidyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254752686|ref|ZP_05204722.1| histidyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254761201|ref|ZP_05213225.1| histidyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|39932345|sp|Q81N41|SYH1_BACAN RecName: Full=Histidyl-tRNA synthetase 1; AltName:
           Full=Histidine--tRNA ligase 1; Short=HisRS 1
 gi|30257919|gb|AAP27148.1| histidine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47503808|gb|AAT32484.1| histidyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180062|gb|AAT55438.1| histidyl-tRNA synthetase [Bacillus anthracis str. Sterne]
          Length = 425

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 128/464 (27%), Positives = 216/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +R++I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEIRNVKGTKDYLPEEQVLRSKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLQLSIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++  F+G ++  P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E     + ++++ +G E+   + +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSSLSNYL 425


>gi|229134174|ref|ZP_04262992.1| Histidyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST196]
 gi|228649282|gb|EEL05299.1| Histidyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST196]
          Length = 431

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 130/456 (28%), Positives = 213/456 (46%), Gaps = 42/456 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D   +E  +RN+I  +  + +E YG  P+ETP L   D +       D   K +++
Sbjct: 8   KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYDLMSYKYGGGDEILKEIYT 67

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR+FIQCD
Sbjct: 68  LKDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 126

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  +     
Sbjct: 127 VDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQAINIPTE----L 179

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V+ ++DK++K G+ GV+  + E              +T E  D + + +   L+ ++
Sbjct: 180 TSDVILSLDKIEKIGIDGVRKDVLER------------GITVEMADTICTTVLSCLKLTI 227

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  E          G +EL  + + +R  G N N I  +  + RGL  YTG VYE  L 
Sbjct: 228 ADFKETF-NNPLVADGVDELQQLQQYLRALGINENTI-FNPFLARGLTMYTGTVYEIFLT 285

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              +           +G GGRYD ++   R    N P  G S G+  +  AL   E    
Sbjct: 286 DASITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQKE---- 333

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYADRRNC 429
            I     + I  +  +     +     Q LR+   ++ E+ L + +     L YA++ N 
Sbjct: 334 TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNYANKENI 388

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           P  +I G  E S   + ++++ +G E+   + + E+
Sbjct: 389 PYVLIIGEEELSTETVVLRNMKEGTEVKIPLSSLEN 424


>gi|118478621|ref|YP_895772.1| histidyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118417846|gb|ABK86265.1| histidyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 444

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 128/464 (27%), Positives = 215/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP+L   + +       D  
Sbjct: 20  MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPMLNMYELMSYKYGGGDEI 79

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 80  LKEIYTLRDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 138

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 139 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILESINIPT 195

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 196 ER----TSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 239

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  +    T    +G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 240 CLQLSIDDFKDAF-NTPLVAEGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 297

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    + P  G S G+  +  AL  
Sbjct: 298 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMSYPTVGISFGLDVIYTALSQ 349

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +           Q LR+   ++ E+ L + +     L Y
Sbjct: 350 KE----TISSTADVFIIPLGTE----LHCLQIAQQLRSTTTLKVELEL-AGRKLKRALNY 400

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E     + ++++ +G E+   + +  ++ 
Sbjct: 401 ANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSSLSNYL 444


>gi|51209886|ref|YP_063550.1| histidine-tRNA synthetase [Gracilaria tenuistipitata var. liui]
 gi|68052941|sp|Q6B910|SYH_GRATL RecName: Full=Histidyl-tRNA synthetase, chloroplastic; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|50657640|gb|AAT79625.1| histidine tRNA synthetase [Gracilaria tenuistipitata var. liui]
          Length = 420

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 97/455 (21%), Positives = 176/455 (38%), Gaps = 51/455 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNK 68
           +  RG  D    EI   + I D    I   + +  I TP++E +    + + +  D  NK
Sbjct: 7   QPLRGTKDILPNEINYWHHIHDKALTILSLHNYSEIRTPIIESTSLFKRSIGETSDIINK 66

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++  D   + I+LR + TA +AR    N        R + +GP+FR E+   GR RQF
Sbjct: 67  EMYTFTDQGDRSITLRPEATASIARAFISNKLYHSNIQRLWYLGPMFRYERPQSGRQRQF 126

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +GS    AD E+  +    L+ + +K  +Y + IN+   L+   +   L   +
Sbjct: 127 HQLGIECIGSINPMADTEVIHLANQLLKELQVK--NYILEINSIGTLEE-RQSYKLDLVE 183

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
            L++    L   D  ++     +++L  +                 +    +  +L+   
Sbjct: 184 YLSQYQQDLD-QDSKNRMYSNPLRILDSKNLKTQE---------ILDGAPKLKKYLNKRS 233

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +  + +   +                          +   KI+  +VRGL+YY    +E
Sbjct: 234 TEHFYLVCTYLNNL-----------------------NITYKINYKLVRGLDYYNQTAFE 270

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                             ++ GGGRYD L+ +  G   PA G++IGI RL+  ++     
Sbjct: 271 IKTNSKN--------SQNTICGGGRYDTLIEQLGGPKTPAVGWAIGIERLLKIIEDKLIL 322

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                    + +        +  K     Q L    I+ E+ L S+ +F  Q+K A +  
Sbjct: 323 PKQ-----KINVYIATQGLAAQKKIWEIIQALEKKNIKFELDL-SNTSFHKQIKKAGKLG 376

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               II G  E     + IK L +  + + +  N 
Sbjct: 377 AKFCIILGDQEIMDNCVTIKRLDEYVQYTAQYSNF 411


>gi|167746630|ref|ZP_02418757.1| hypothetical protein ANACAC_01341 [Anaerostipes caccae DSM 14662]
 gi|167653590|gb|EDR97719.1| hypothetical protein ANACAC_01341 [Anaerostipes caccae DSM 14662]
          Length = 397

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 85/447 (19%), Positives = 175/447 (39%), Gaps = 56/447 (12%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGVFSLQDDDGQWI 81
           ++ R  + +  +++ E Y    I TP+ E++    + + +  D   K +++ +D   + I
Sbjct: 1   MQKRTYLENVFKDLCETYNIHEIITPVFEHTVLFQRSVGETTDVVQKEMYTFEDKGNRSI 60

Query: 82  SLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
           +L+ + TA   R   E+       P + + I P FR EK   GR RQ  Q  ++ VG+ +
Sbjct: 61  TLKPEGTAGAIRAYLEHGMQNEPQPVKMFYITPAFRYEKPQSGRLRQHHQFGIEFVGAES 120

Query: 141 ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD-GILEKIGLHGDDKLNERLIVLRA 199
             A+ E+  ++   +  +G+     HI             E +  +     ++     R 
Sbjct: 121 PLAEVELITLVTTFINKIGLSDAKLHINSIGCSNCRKDYNEALLAYLHRHEDKLCPTCRE 180

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
                    +   L + + +  +  +  K A  T       + +L  +  +   EL  L+
Sbjct: 181 RM-------EKNPLRVIDCKVPSCKEIIKDAPRT-------IDYLDEECREHFEELKSLL 226

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
                                     +   ++ + IVRGL+YYT  V+E +         
Sbjct: 227 DSL-----------------------NIPYEVDTGIVRGLDYYTKTVFEFV--------- 254

Query: 320 QKPVVFGSVGGGGRYDGLVSRFK-GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV 378
                  ++ GGGRYD LV       ++P+ GF +G+ R++  L+   +    +    P+
Sbjct: 255 --NGEGFTLCGGGRYDNLVHEIDGKASMPSVGFGMGVERILFFLEEEGA---ELPAGRPL 309

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +       ++ ++       LR  G + E      +    Q+KYA++      II G  
Sbjct: 310 NLYVGILGKEAKARAYEIVSGLRMEGFKVETDY-LGRGVKAQMKYANKLRAQNTIIIGEN 368

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNES 465
           E      ++K++  G+E+   + + ++
Sbjct: 369 ELKENKGRLKNMESGEEIEISLDDIKN 395


>gi|238897950|ref|YP_002923630.1| histidine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465708|gb|ACQ67482.1| histidine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 429

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 88/481 (18%), Positives = 185/481 (38%), Gaps = 60/481 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M    K + +  RG  DC   +  +  +I ++++NI   + ++ I  P++E +    + +
Sbjct: 1   MTDVMK-KLQAIRGMNDCLPPDSELWEQIENTLKNILATHCYNEIRIPIIETTTLFKRAI 59

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D + + ++LR + TA   R   E+        R + IG +FR E+
Sbjct: 60  GEVTDVVEKEMYTFDDRNSESVTLRPEGTAGCVRAGVEHGLFHNKEQRFWYIGSMFRYER 119

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q  V+  G      DAE+ +M A   + +GI        +    I  R  
Sbjct: 120 PQKGRYRQFHQLGVEVFGLYGPDIDAELILMTARFWKKLGILNYVQLELNSIGSIEERSR 179

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L K       +L E  I         +     ++LL  + +               
Sbjct: 180 YRESLLKFLEKNKAQLTEEAIH--------RMHKNSLRLLDSKDQVVQK---------IL 222

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               ++  +L+ + ++    L + +  +                           +++  
Sbjct: 223 ADAPLLSEYLNDESKQHFLTLCQFLNES-----------------------GISYRVNPY 259

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRGL+YY   V+E +               G++  GGRYDGLV +  G++         
Sbjct: 260 LVRGLDYYNKTVFEWVTN--------HLGSQGAICAGGRYDGLVEQLGGKDSTPAVGFAI 311

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLG 412
               +V L  ++    +      + +  +  ++ S +K     + +R +   ++ ++  G
Sbjct: 312 GLERLVLL--VKKVNPDFYLSPKLDVYFVSENNTSRAKAIKLAEKIRDSLPQLKLKLHYG 369

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             +    QL  A++ +   A+I G  E ++  + IK+L  G++     ++   +      
Sbjct: 370 -KQKISKQLSSANKCSATFALILGENEIAKQKIVIKNLLTGEQNLLMQEDLILFLNKIFI 428

Query: 473 Q 473
           +
Sbjct: 429 E 429


>gi|322823602|gb|EFZ29321.1| histidyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 530

 Score =  217 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 108/474 (22%), Positives = 193/474 (40%), Gaps = 48/474 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E  +G  D P + +R R  + D      + +GF+  + P+LE  +   +   +E    + 
Sbjct: 104 EPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEE--ITEQ 161

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +F+     G  ++LR ++T  LAR +     +++ P + Y I   +R E    GR R+  
Sbjct: 162 MFNFITKGGHRVALRPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRYEAITRGRRREHY 221

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q ++D VG  + +A+ E+       + ++G+   D  I +N+RK+L  ++E+ G+  D  
Sbjct: 222 QWNMDIVGVKSVSAEVELVCAACWAMRSLGLSSKDVGIKVNSRKVLQTVVEQAGVTSD-- 279

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +   V   +DK++K   + V+  L                L    +D + + LS+   
Sbjct: 280 --KFAPVCVIVDKMEKIPREEVEAQLA------------VLGLEPTVVDAITTTLSLKSI 325

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +            +   EL    E V   GY  + +   +++VRGL YYTG V+E 
Sbjct: 326 DEIAQRV------GEEHEAVKELRQFFEQVEAYGYG-DWVLFDASVVRGLAYYTGIVFEG 378

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALKSLESS 368
                      +   F ++ GGGRYD L++ +     +P  GF  G   ++  L+     
Sbjct: 379 F---------DREGKFRALCGGGRYDNLLTTYGSPTPIPCAGFGFGDCVIVELLQEKRLL 429

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +    +  V    +  D           + LR AG  A++ L   K       YADR  
Sbjct: 430 PDIPHVVDDV---VIPFDESMRPHALAVLRRLRDAGRSADIILD-KKKVVQAFNYADRVG 485

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
              A++    E  RG +Q+K L +G                      +P+  LV
Sbjct: 486 AVRAVLVAPEEWERGEVQVKMLREGTGKE---------EGGAERGFAVPLDRLV 530


>gi|254685900|ref|ZP_05149759.1| histidyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254742463|ref|ZP_05200148.1| histidyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
          Length = 425

 Score =  217 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 128/464 (27%), Positives = 216/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +R++I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEIRNVKGTKDYLPEEQVLRSKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLQLSIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++  F+G ++  P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSIASS--------IGSGGRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E     + ++++ +G E+   + +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSSLSNYL 425


>gi|254282343|ref|ZP_04957311.1| histidyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678546|gb|EED34895.1| histidyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 404

 Score =  217 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 107/465 (23%), Positives = 184/465 (39%), Gaps = 74/465 (15%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDDDGQWISLRYDL 87
           +  + R +   YG+  I  P++E +    + + +  D   K +++ +D +G  ISLR + 
Sbjct: 1   MEAAARRVLAGYGYQEIRLPVMESTGLFARSIGEVTDIVEKEMYTFEDRNGDSISLRPEG 60

Query: 88  TAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM 147
           TA   R V ++   I  P R + +GP+FR E+   GR RQF Q  V+  G ++   DAE+
Sbjct: 61  TAGCVRAVVQHNLAIT-PRRLWYMGPMFRYERPQKGRQRQFHQLGVEAFGVASPDQDAEI 119

Query: 148 CMMMADTLEAVG---------IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
            ++     +A+G             +       R  L   L++     D+          
Sbjct: 120 LLLCQRLWQALGVADDLKLELNSIGNTASRDRFRSELVKYLQQYRGDIDE---------- 169

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
             D   +     +++L  +                 +    ++ FL  +       L +L
Sbjct: 170 --DSQRRLETNPLRILDSKHSRTQE---------IVDSGPRLLDFLDDESRADFERLQDL 218

Query: 259 VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
           +  +    +   +L                       VRGL+YY   V+E          
Sbjct: 219 LSTSGVAFELNPKL-----------------------VRGLDYYNKTVFEWTTTA----- 250

Query: 319 KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV 378
                  G+V GGGRYDGLV +F G++VPA GF +G+ RLI+ +++         E    
Sbjct: 251 ---LGAQGTVCGGGRYDGLVRQFGGKDVPAAGFGLGLERLILLMQAQGEQKEPAAE---- 303

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            I  +  D  +        + LR+A   +R    LG   +F +Q K AD+    LA++ G
Sbjct: 304 -IYVVTSDESAYRHALPRVEALRSAFPRLRIVQHLGGG-SFKSQFKRADKSGAALALVFG 361

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             E S   + +K L  G + S    ++    +A   Q  I   E+
Sbjct: 362 DTECSNNTVTLKPLRGGDQRSI---DDAGLSDAVAEQFEIESEEV 403


>gi|62184722|ref|YP_219507.1| histidyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81313093|sp|Q5L735|SYH_CHLAB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|62147789|emb|CAH63535.1| putative histidyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 430

 Score =  217 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 112/472 (23%), Positives = 187/472 (39%), Gaps = 66/472 (13%)

Query: 7   LRAELPRGFADCPT---------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           ++  LP+G  D            +   + +R+ D I ++   YGF  I TP+ E S+   
Sbjct: 1   MKVALPKGVFDIFPYITDAKHMWRHTSLWHRVEDVIHDVCGLYGFSEIRTPVFEKSEVFL 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
                 D   K +++  D  G+ ++LR + TAP+ R   +N        + Y I P+FR 
Sbjct: 61  HVGEQSDIVKKEMYTFLDKKGRSLTLRPEGTAPIVRSFIDNSMNQRDDNKFYYILPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRK 173
           E+   GR+RQ  Q  V+ +G      DAE+  ++     AVG++     +        RK
Sbjct: 121 ERQQSGRYRQHHQFGVEAIGVRHPLRDAEILALLWHFYSAVGLQHMQVQLNFLGGEVTRK 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
             D IL +  L     L+            ++F    +++L  +   D            
Sbjct: 181 RYDKILREYFLDHLSSLSLLS--------KERFNTNLLRILDSKEPEDQE---------I 223

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            +    ++ ++S D  K   E+   +                          +    I+ 
Sbjct: 224 IQSAPPILDYVSDDDRKYFDEILSALDAL-----------------------NIAYDINP 260

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YYT  V+EAI                ++GGGGRYDGL++   G   PA GF I
Sbjct: 261 RLVRGLDYYTDLVFEAITT--------CRDHSYALGGGGRYDGLIASSGGPATPACGFGI 312

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+ R+I  L +      N   +    +  +  +S + S   ++ Q LR+ GI  E+   +
Sbjct: 313 GLERVIQTLLAQG----NFTPLSSHKLRLIPVESQADSFCFVWAQHLRSLGIPTEVDW-T 367

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            K   N LK AD          G  E     L +K+++  +E S   +  E 
Sbjct: 368 HKKLKNALKIADAEKATFVCPVGERELVSEQLTVKNMSLRQEFSGSKQEVEQ 419


>gi|326559233|gb|EGE09664.1| histidyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 422

 Score =  217 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 96/477 (20%), Positives = 179/477 (37%), Gaps = 76/477 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K         RGF D   ++      +  ++  + ++YG+  I  PL+E +    + +
Sbjct: 1   MNK-----ITAIRGFNDVLPEQTPAWRAMERTLIEVMDSYGYSQIRLPLVEETQLFARGV 55

Query: 61  PD-EDRPNKGVFSL-----QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            +  D   K +F +     + D+G   +LR + TA   R + E+  T     + + +GP+
Sbjct: 56  GEATDIVEKEMFGVVHGGNKGDEGSSFTLRPEGTAGCVRAIVEHNLTRGDTPKLWYLGPM 115

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGI 169
           FR E+   GR+RQF Q  V+  G+    ADAE+  M     + +GI  +     +     
Sbjct: 116 FRYERPQKGRYRQFHQLGVEYFGAELPDADAELIAMTYHMWQKLGIGEHVTLQLNTLGET 175

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           + R      L +      + L++        D   +     +++L  +            
Sbjct: 176 DERVAYKSALVEYLTTHQEALDD--------DSKRRLNTNPLRILDSKDENTQQ------ 221

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                +    +  FL         ++   +       +  ++L                 
Sbjct: 222 ---ILKNAPKLGEFLGEASLAHFEKVQNYLSALGISFEINDKL----------------- 261

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD---GLVSRFKGQNV 346
                 VRGL+YY   V+E +          K     +V GGGRYD   G++     Q+ 
Sbjct: 262 ------VRGLDYYNKTVFEWVT--------DKLGSQATVCGGGRYDGLVGIIKGNAEQSE 307

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ--MLRTAG 404
           PA GF++G+ RL++ + ++      +     V +       D       Y +   LR   
Sbjct: 308 PAVGFAMGLERLMLLIDAVN--PYQVASWCDVFVIAHP---DYYIDGLKYAESLRLRQDN 362

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +R +M   S+    +Q+K AD+      +I    E +   + IK +A G++    I 
Sbjct: 363 LRIKMA--SATGLKSQMKKADKSGAAYTVIIAEDEVNANQITIKTMATGEQRRAPID 417


>gi|332530162|ref|ZP_08406110.1| histidyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332040354|gb|EGI76732.1| histidyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 436

 Score =  217 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 92/451 (20%), Positives = 166/451 (36%), Gaps = 59/451 (13%)

Query: 15  FADCPT---------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
             D             +         ++R +   YG+  I TP++E +    + L +  D
Sbjct: 1   MNDILPASVPRTEKLPDSARWQWFEAAVRKVLARYGYQYILTPIVEPTALFVRGLGEVTD 60

Query: 65  RPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              K ++S  D  +G  ++LR + TA + R + E+      P R + +GP+FR+E+   G
Sbjct: 61  IVEKEMYSFTDSMNGDKLTLRPEGTAGIVRAMIEHNALYNGPLRLWTLGPMFRHERPQKG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+RQF Q DV+ +G +    DAEM ++       +G+    +             L  +G
Sbjct: 121 RYRQFHQLDVEALGFAGPDVDAEMILVARSLWRELGLIEGQHVRLE---------LNSLG 171

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              + + +   ++        +      + L                 L  E    +  F
Sbjct: 172 QPEERRQHREALIRHFEQHASQLDEDAQRRLHSNPLRILDSKNPAMQTLI-EAAPRLFDF 230

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +       +   +                              +++  +VRG++YY 
Sbjct: 231 LGAESLAHFDAVKSTLDAAGL-----------------------EYRVNPRLVRGMDYYN 267

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +          +    G+V GGGRYDGL+S+  G+  PA GF +GI RL++   
Sbjct: 268 LTVFEWVT--------DQLGSQGTVCGGGRYDGLISQLGGKPAPAVGFGLGIERLLL--- 316

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF---LGSSKNFGNQ 420
            L    N         +  +      L+      + LR  G+R       +    +  +Q
Sbjct: 317 -LAQDLNLPMPGTAPDVYAIVPPGTPLAPVMTTLEALRARGLRVVQHAGGVDGPGSMKSQ 375

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
            K AD      A++ G  E + G + +K L 
Sbjct: 376 FKKADASGAAWALVFGEEELAAGEVTLKALR 406


>gi|217960736|ref|YP_002339300.1| histidyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229139939|ref|ZP_04268503.1| Histidyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST26]
 gi|217065497|gb|ACJ79747.1| histidyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228643454|gb|EEK99721.1| Histidyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST26]
          Length = 426

 Score =  217 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 131/464 (28%), Positives = 212/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQAINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              +T E  D + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GITEELADTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 280 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALAQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   I+ E+ L + +     L Y
Sbjct: 332 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSIKIELEL-AGRKLKRALNY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S     ++++ +G E+   + +  ++ 
Sbjct: 383 ANKENIPYVLIIGEEELSTETAMLRNMKEGSEVKVPLSSLSNYL 426


>gi|262371083|ref|ZP_06064405.1| histidyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313969|gb|EEY95014.1| histidyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 431

 Score =  217 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 93/480 (19%), Positives = 168/480 (35%), Gaps = 78/480 (16%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E ++   + + D  D   K ++
Sbjct: 8   KGFNDILPTQTPAWRRLEQHLASLMDAYGYQQIRLPIVEQTNLFKRSIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + IGP+FR EK   GR+RQF 
Sbjct: 68  TFLDKGNPPESLTLRPEGTAGCVRAMLEHNLLRGATPRVWYIGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKILDGILE 180
           Q  V+  G +    DAE+ +M A   + +G             +       R  L   LE
Sbjct: 128 QFGVETFGVATPDMDAELILMTARLWKRMGVADKVQLELNTLGESDERAAYRAALVEFLE 187

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 D+            D   +     +++L  +     +           E    +
Sbjct: 188 SHKNDLDE------------DSQRRLTTNPLRILDSKDAKTQA---------ILENAPKL 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             F+  +  +    L E +                               I+  +VRGL+
Sbjct: 227 HDFMGEETLQHFATLQEYLTDA-----------------------GVSFVINQKLVRGLD 263

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E                 G+V  GGRYDGLV + KG+   +         +  
Sbjct: 264 YYNKTVFEWTTT--------HLGSQGTVCAGGRYDGLVGQLKGKADQSVPAVGFAMGMER 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--------GIRAEMFLG 412
            L  LE   +        +      D  S  K  +  + +R           ++     G
Sbjct: 316 LLLLLEQVEDATPIRDCEMFLLA--DPASQGKALVLAEQIRNQLDAASSTLRLKV----G 369

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           S  +  +Q+K AD+     A+I G  E       +K+LA  ++    + +   +   + +
Sbjct: 370 SHGSMKSQMKKADQSGALFALILGEREVEAAQFAVKELATAEQTLVAVDDIVPFMIEKFS 429


>gi|13540985|ref|NP_110673.1| histidyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|32130137|sp|Q97CE6|SYH_THEVO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|14324369|dbj|BAB59297.1| tRNA synthetase His [Thermoplasma volcanium GSS1]
          Length = 426

 Score =  217 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 119/468 (25%), Positives = 202/468 (43%), Gaps = 45/468 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E  +GF D   +++ I   I ++  ++ E+YGF  I+ P LEY D       +E   
Sbjct: 1   MQIERIKGFRDFYPEDMEIEKFIFETASSVAESYGFKRIDFPSLEYIDLYRIKSGEELLN 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
               +S  D  G+ ++L  + T    R +      I  P R Y    V+R E+   GRFR
Sbjct: 61  --QTYSFTDRGGREVTLIPEATPSTVRMLTSRK-DIAKPVRWYSFPKVWRYEEPQAGRFR 117

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q + D  G S E ADAE+  + +  L+ +G+    Y I +N+R +++ IL  +G+  
Sbjct: 118 EHYQFNADIFGPSNEEADAEIISLASGILDGLGL-SGAYEIRVNSRIMMEDILNGMGIA- 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   V   +D+  K   +               D      L+ E  + +    S 
Sbjct: 176 -----DPYTVFSIVDRFHKVSKETF------------VDDLMSVGLSEENSNTIYRMCSE 218

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             E         + G+    K    L+   +++++ G  S +   S  IVRGL YYTG V
Sbjct: 219 ASE---PGGISGLFGSGKVSKAAERLIRTIDILKEYGVKSVKYDFS--IVRGLSYYTGLV 273

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EA           K   F ++ GGGRYD L   F  Q++PA GF +G + + + LKS  
Sbjct: 274 FEAY---------DKSGQFRAILGGGRYDNLAKLFSEQDIPAVGFGMGDAVISLLLKSKG 324

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI--RAEMFLGSSKNFGNQLKYA 424
               + K+   V            S     ++MLR++G    AE+     ++  +QLKYA
Sbjct: 325 VKAPHAKKSVYVCRVGTVKAERIAS----ISKMLRSSGFIVSAEI---MDRSLSSQLKYA 377

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               C  A+I G  +     + ++DL+ G++    + +   + E   +
Sbjct: 378 SYEGCEYAVIAGERDLENNSVTVRDLSTGEQEIVTLGDLVPFLEKSTS 425


>gi|65320616|ref|ZP_00393575.1| COG0124: Histidyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165868911|ref|ZP_02213571.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167637093|ref|ZP_02395373.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170705013|ref|ZP_02895478.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177650107|ref|ZP_02933108.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190564946|ref|ZP_03017867.1| histidyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227813844|ref|YP_002813853.1| histidyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229604864|ref|YP_002867545.1| histidine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|164715637|gb|EDR21154.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167514600|gb|EDR89966.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170129868|gb|EDS98730.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172084059|gb|EDT69118.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190564263|gb|EDV18227.1| histidyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227005590|gb|ACP15333.1| histidine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229269272|gb|ACQ50909.1| histidine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 426

 Score =  217 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 128/464 (27%), Positives = 216/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +R++I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEIRNVKGTKDYLPEEQVLRSKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLQLSIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++  F+G ++  P  G S G+  +  AL  
Sbjct: 280 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALSQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 332 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E     + ++++ +G E+   + +  ++ 
Sbjct: 383 ANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSSLSNYL 426


>gi|325968740|ref|YP_004244932.1| histidyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323707943|gb|ADY01430.1| histidyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 430

 Score =  217 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 124/454 (27%), Positives = 218/454 (48%), Gaps = 40/454 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
               RG  D   +E     ++ D +  + E++G+  +ETP LEY + L     ++     
Sbjct: 8   LRPVRGMRDLTPEEYYPMFQVFDKLARVAESFGYLRVETPALEYYEILKAKAGED--VIN 65

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ + LR+D+T P+AR V      +  P R Y I  V+R ++   GR+R+F
Sbjct: 66  EIYYFKDKAGREVGLRFDMTVPVAR-VISYRVDVPKPIRWYYITKVWRYDEPQHGRYREF 124

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +GSS+  ADAE+  +  + L ++     D+ I IN+R+I++ +L K G+  D 
Sbjct: 125 HQFGIEFIGSSSIRADAEILAVGVEALRSLD--IGDFRIRINDRRIIEQLLSKFGIPSDV 182

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLG--EGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           K      VLR +DK  K   + +  +L   E   D + +  + AN +      + SF   
Sbjct: 183 K----PSVLRIMDKRGKVPDEELLEMLRNLELSNDTAQEVLRLANTSESLDKAIGSF--- 235

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                       +  +    K +NEL+   ++     Y      +   IVRGL+YYTG V
Sbjct: 236 ----------RELGVSDDFIKYYNELMEFLDMYGIRSYMD----LDMGIVRGLDYYTGIV 281

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E  +    ++          VGGGGRYD L+  + G+ +PA+GF++GI RL+  L+   
Sbjct: 282 FEMYVTDYKLS----------VGGGGRYDNLIEIYSGKPMPASGFAMGIERLLEVLEQRG 331

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           S    + ++    +  + ++ + LS       +LR  G +  M  G  K+  + L+YA +
Sbjct: 332 SLKRGLPQID-YYVYVLSNEKNYLSLGYRLASILRAGGSKVVMDTGE-KSLRSALEYASK 389

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
            N    II G  E SRG+++++D++   E    +
Sbjct: 390 INARYFIIIGPKEISRGVVKVRDMSNWSEREAPL 423


>gi|227501341|ref|ZP_03931390.1| histidine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216475|gb|EEI81884.1| histidine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 428

 Score =  217 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 125/461 (27%), Positives = 213/461 (46%), Gaps = 36/461 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDE 63
             ++     G  +   KE  + ++I + I   Y+ Y F PI+TP++E ++    K   + 
Sbjct: 2   KIVKPSTIAGVMELLPKEQLVFDKIKNIIEESYKKYQFMPIDTPVIEKNEILFAKGGGET 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
               K ++ +  +  + +SLR+DLT PLARYVAE+F  + FP + Y I  V+R E++  G
Sbjct: 62  ---EKQIYEIASES-KDMSLRFDLTVPLARYVAEHFQDLNFPFKRYHIAKVYRGERNQKG 117

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD+D +G ++ +   +  +          +  +D    INNRK+L+G  + +G
Sbjct: 118 RYREFYQCDIDIIGHNSLSIYNDALLPRVIYDIFDKLNFSDLTFKINNRKLLNGFFKSLG 177

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +           VLR IDK DK GL      L +                 E+   +++F
Sbjct: 178 IEDS------TDVLRTIDKKDKIGLDNTYEELVKLTN-------------EEKAHTIINF 218

Query: 244 LSID-LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           ++     +++ E            +G +EL  + + +         IKI   I RGL+YY
Sbjct: 219 INNTASNQTLLEKLSDFSDNELFLEGLDELSKVYKYMIDLDIPDKNIKIDLAITRGLDYY 278

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  VYE  +              GSV  GGRY+ L S F  Q +P  G SIG++RL    
Sbjct: 279 TSTVYETFINGYEK--------IGSVCSGGRYEDLASNFSKQKLPGVGMSIGLTRLFYQF 330

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L    + I+ +   LI  MD +++         + LR+ G   +++L   K F  ++ 
Sbjct: 331 QELGLIDDQIESLTDSLIIPMDEEAN--EYGIEVLKKLRSRGEAVDIYLEDGK-FKKKMT 387

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           YAD+      II G  E +   + IK++  G+++ +   + 
Sbjct: 388 YADKLGVKEVIILGADELANKEVSIKNMQTGEQIKKSFADL 428


>gi|257784208|ref|YP_003179425.1| histidyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472715|gb|ACV50834.1| histidyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 436

 Score =  217 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 104/498 (20%), Positives = 184/498 (36%), Gaps = 84/498 (16%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +  +G  D     +R    + D  R+++  YGFD IETP LE  D+    + +  D   K
Sbjct: 3   QRIQGTEDLYGGYMRSWEHMQDVARHLFGTYGFDRIETPALEQVDTFVHGIGESTDVVRK 62

Query: 69  GVFS-----LQDD----DGQW-------ISLRYDLTAPLARYVAENF--DTIVFPCRTYR 110
            +F      L DD      +        +++R + TA + R   E+        P + + 
Sbjct: 63  EMFRVFSGALLDDLLAAGNESGLKPRQRMAMRPEGTAGVVRAAVEHNFVPQGGTPAKLWY 122

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
              +FR E+   GR RQF Q  V+ +G+S   ADAE  +M+    E +G    +  + IN
Sbjct: 123 AEAMFRGERPQKGRLRQFHQVGVEWLGASDPAADAESIIMLMKFYEQMGFSPANMKLMIN 182

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           +    +            +           D L++  +  ++    + + +      K A
Sbjct: 183 SMGDAEC--RPAYREKVKQFILDHKDQMCEDCLERAEINPLRAF--DCKNEGCHAVMKDA 238

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L S+        L  D      ++   +                               
Sbjct: 239 PLISDN-------LCDDCRTHYEQVKAYLDAAGIL-----------------------YI 268

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              T+VRGL+YYT  V+E  +    +                RYDGLV    G+  P  G
Sbjct: 269 EDPTLVRGLDYYTRTVFEVEIPNAGVGAIGGGG---------RYDGLVELEGGKPTPGVG 319

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F++G  R+++AL++L     + +   P  +      ++           LR AGIR E  
Sbjct: 320 FAVGFERIMLALEALGV---SAEPAAPSCVYVACAGAEQAPVVFDAVLALREAGIRCE-A 375

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             + ++   Q K AD+    L ++ G  E   G++ ++D+   +++              
Sbjct: 376 DRTGRSLKAQFKQADKMGAALCVVIGPDEVEAGVVTLRDMESHEQV-------------- 421

Query: 471 VAQITIPISELVSTVKKI 488
                +P  +LV+ VK  
Sbjct: 422 ----QVPSDQLVAEVKAR 435


>gi|332287036|ref|YP_004421937.1| histidyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847633|emb|CBY16621.1| putative histidyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506741|gb|ADZ18379.1| histidyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328914268|gb|AEB55101.1| histidyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 430

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 186/468 (39%), Gaps = 58/468 (12%)

Query: 7   LRAELPRGFADCPT---------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           ++  LP+G  D            +   + +R+ D I ++   YGF  I TP+ E S+   
Sbjct: 1   MKVALPKGVFDIFPYITDAKHMWRNTSLWHRVEDVIHDVCSLYGFSEIRTPVFEKSEVFL 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
                 D   K +++  D  G+ ++LR + TAP+ R   +N        + Y I P+FR 
Sbjct: 61  HVGEQSDIVKKEMYTFLDKKGRSLTLRPEGTAPIVRSFIDNPMNQRDDNKFYYILPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q  V+ +G      DAE+  ++     AVG++     +     +    
Sbjct: 121 ERQQSGRYRQHHQFGVEALGVRHPLRDAEILALLWHFYSAVGLQHMQVQLNFLGGEATRK 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             +KI      +     +   +    ++F    +++L  +   D             +  
Sbjct: 181 RYDKIL----REYFHDHLSSLSSLSKERFNTNLLRILDSKEPEDQE---------IIKSA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ ++S D  K   E+   ++                         +    I+  +VR
Sbjct: 228 PPILDYISDDDHKYFDEILSALRDL-----------------------NISYDINPRLVR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYT  V+EA+  +   +          +GGGGRYDGL++   G + PA GF IG+ R
Sbjct: 265 GLDYYTDVVFEAVTTYGGHSYA--------LGGGGRYDGLIASSGGLSTPACGFGIGLER 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +I  L +      N   +    +  +  +  + S   ++ Q LR+ GI  E+   + K  
Sbjct: 317 VIQTLLAQG----NFTPLSSHKLRLIPVEPQADSFCFVWAQHLRSLGIPTEVDW-THKKL 371

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              LK AD          G  E     L +K+++  KE S   +  E 
Sbjct: 372 KTALKIADAEKATFVCPVGERELVSEQLTVKNMSLHKEFSGSKQEVEQ 419


>gi|302023321|ref|ZP_07248532.1| histidyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 405

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 94/451 (20%), Positives = 173/451 (38%), Gaps = 52/451 (11%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGVFSLQDDDGQWISLRYDL 87
           + +  R+I++ Y +  I TP+ E+ + + + + D  D   K ++   D   + I+LR + 
Sbjct: 1   MENFTRSIFKQYNYAEIRTPIFEHYEVISRSVGDTTDIVTKEMYDFYDKGERHITLRPEG 60

Query: 88  TAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
           TAP+ R   EN      +  P + Y +GP+FR E+   GR RQF Q  V+  GS+    D
Sbjct: 61  TAPVVRSYVENKLFAPEVQKPAKFYYMGPMFRYERPQAGRLRQFHQIGVECFGSNNPATD 120

Query: 145 AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
            E   M     E +GIK    H+             +  +     L ++L    + D   
Sbjct: 121 VETIAMAYHFFEELGIKDIRLHLNSLGNPESRAAYRQALIDYLTPLKDQL----SKDSQR 176

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA 264
           +     +++L  + + D          +  E    ++ +L  +       +  ++     
Sbjct: 177 RLEENPLRVLDSKEKEDK---------VAVENAPSILDYLDEESTAHFEAVKTMLDSLGI 227

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
                                     I + +VRGL+YY   ++E +      +       
Sbjct: 228 A-----------------------YVIDTNMVRGLDYYNHTIFEFMTEVGGND------- 257

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
             ++  GGRYDGLV+ F G   PA GF +GI RLI+ L+        +     + +    
Sbjct: 258 -LTICAGGRYDGLVTYFGGPETPAFGFGMGIERLILVLEKQGI---ELPLDTQLDVYIAV 313

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
              ++        Q +R  G RAE      +    Q K AD       I  G  E   G 
Sbjct: 314 LGQEANGGALDLVQAIRKQGFRAERDY-LDRKLKAQFKSADVFGAKAIITLGGSEIESGQ 372

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + +K+     ++   ++  ++   + + ++ 
Sbjct: 373 VVVKNNQTRSQVETSLEALKTDFASILEELE 403


>gi|89096141|ref|ZP_01169034.1| histidyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89088995|gb|EAR68103.1| histidyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 430

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 124/452 (27%), Positives = 202/452 (44%), Gaps = 35/452 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+  +  +G  D   +E  +R RI   + +++  YG  P+ETP+L Y++ L        
Sbjct: 2   KKMNYQNVKGTKDYLPEEEIVRRRIQRELEDVFIQYGCKPLETPILNYTELLASKYGGGA 61

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              + +++L D  G+ ++LRYDLT P A+  A N   I  P + Y IG VFR+     GR
Sbjct: 62  EILEEMYTLSDRGGRDLALRYDLTIPFAKAAAMN-PGIRLPFKRYEIGRVFRDGPIKTGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+F QC VD  G+ ++ A+AE+ +M  D  + +G+   D  I  NNRK+L G+L++ G+
Sbjct: 121 LREFTQCAVDIAGADSQLAEAELMVMALDAFQRIGL---DITIQYNNRKLLSGMLQEFGV 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             + +    L     +DKL+K G Q V   L                +  E I  +  F+
Sbjct: 178 LEEKRNEAIL----VLDKLEKAGWQKVSEELA------------AKGIGYEAIQRIAGFI 221

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S      +    E+    +  ++G  EL+ +   +     +S +   +  + RGL+ YTG
Sbjct: 222 SDKNIGKLAYYEEMEDKNVHLKEGLQELMELEGYL-NYLNSSRKAVFNPFLARGLDIYTG 280

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA-LK 363
            +YE  L    +          S+G GGRYD  +  F G         I      +    
Sbjct: 281 TIYEIFLTDRSLA--------SSIGSGGRYDNAIGGFIGSGKKVATVGISFGLDAIFTAV 332

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           S   S    +      I  ++   +SL+      Q LR  G R E+ LGS +     L+ 
Sbjct: 333 SQSLSWTERESTADYFIIPINTPKESLA----LAQYLREKGWRVELELGS-RKISKALER 387

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
           A++ N    I+ G  E S    ++KD+  G+E
Sbjct: 388 ANKENIRKVILLGEEEVSNNQYKVKDMETGEE 419


>gi|71419703|ref|XP_811246.1| histidyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70875890|gb|EAN89395.1| histidyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 478

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 108/474 (22%), Positives = 193/474 (40%), Gaps = 48/474 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E  +G  D P + +R R  + D      + +GF+  + P+LE  +   +   +E    + 
Sbjct: 52  EPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEE--ITEQ 109

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +F+     G  ++LR ++T  LAR +     +++ P + Y I   +R E    GR R+  
Sbjct: 110 MFNFITKGGHRVALRPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRYEAITRGRRREHY 169

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q ++D VG  + +A+ E+       + ++G+   D  I +N+RK+L  ++E+ G+  D  
Sbjct: 170 QWNMDIVGVKSVSAEVELVCAACWAMRSLGLSSKDVGIKVNSRKVLQTVVEQAGVTSD-- 227

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +   V   +DK++K   + V+  L                L    +D + + LS+   
Sbjct: 228 --KFAPVCVIVDKMEKIPREEVEAQLA------------VLGLEPTVVDAITTTLSLKSI 273

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +            +   EL    E V   GY  + +   +++VRGL YYTG V+E 
Sbjct: 274 DEIAQRV------GEEHEAVKELRQFFEQVEAYGYG-DWVLFDASVVRGLAYYTGIVFEG 326

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALKSLESS 368
                      +   F ++ GGGRYD L++ +     +P  GF  G   ++  L+     
Sbjct: 327 F---------DREGKFRALCGGGRYDNLLTTYGSPTPIPCAGFGFGDCVIVELLQEKRLL 377

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +    +  V    +  D           + LR AG  A++ L   K       YADR  
Sbjct: 378 PDIPHVVDDV---VIPFDESMRPHALAVLRRLRDAGRSADIILD-KKKVVQAFNYADRVG 433

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
              A++    E  RG +Q+K L +G                      +P+  LV
Sbjct: 434 AVRAVLVAPEEWERGEVQVKMLREGTGKE---------EGGAERGFAVPLDRLV 478


>gi|55794131|gb|AAV65958.1| histidyl-tRNA synthetase [Lactobacillus hilgardii]
          Length = 428

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 96/443 (21%), Positives = 170/443 (38%), Gaps = 49/443 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + P+G  D    EI +  ++    R+ +  +G+  I TP+ E  +   + + D  D   
Sbjct: 6   YQRPKGTVDILPGEIEVWQKVEKIARDTFNQFGYRGIRTPIFENYNVFARNVGDTSDIVE 65

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGR 124
           K ++   D  G+ ++LR + TA   R   EN         P + Y +GP+FR E+   GR
Sbjct: 66  KQMYDFDDKGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFRYERPQSGR 125

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q   + + S +   D E+        + +GI      +     K       K  +
Sbjct: 126 QRQFTQIGCEALNSESPQIDVEVISEALQFFKQLGINDLKLTVNTLGDKETRDAYHKALI 185

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                  ++L    + D  ++     +++L  +  TD                  ++  L
Sbjct: 186 DYLKPYYDQL----SDDSKERMYKNPLRVLDSKDETDQK---------IVANAPSILDSL 232

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S    K   E+ +L+       +  +++                       VRGL+YYT 
Sbjct: 233 SDYSAKYFEEVKKLLDKLNIKYEIDSDM-----------------------VRGLDYYTQ 269

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++E +    V         + +V GGGRY+GL+S+  G +    G+ IG+ R ++ L  
Sbjct: 270 TIFEIMSASDVFG-----GGYVTVCGGGRYNGLISQLGGPDEGGIGYGIGVER-LLLLVQ 323

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E+     K    V   + D + D L         +R  G+ A+      K  G+Q+K A
Sbjct: 324 KENPDFTPKYGPDVFFASADDEGDEL--AFEVLDKIRKNGVSADKNYQDVK-VGSQIKEA 380

Query: 425 DRRNCPLAIIQGTGERSRGMLQI 447
            RR      + G  E   G  ++
Sbjct: 381 IRRKTRYYAVIGKKEVEEGKFEL 403


>gi|313682359|ref|YP_004060097.1| histidyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313155219|gb|ADR33897.1| histidyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 405

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 99/464 (21%), Positives = 173/464 (37%), Gaps = 71/464 (15%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D  +++       L     I + YGF  IETPLLE +    + + +  D   
Sbjct: 2   IQSLRGMNDILSEDYERFEYFLSQASTIAKRYGFHYIETPLLEETSLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRFR 126
           K ++   D     + LR + TA + R   ++           Y  GP+FR E+   GR R
Sbjct: 62  KEMYQFTDKGDNDVCLRPEGTAGVVRAFVQHKLDKKGGIHRFYYHGPMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG-------IKRNDYHIGINNRKILDGIL 179
           +F Q  V++ G  +   DA M MM+AD L+A+G           D H     R+ L   +
Sbjct: 122 EFHQFGVESFGVDSVYEDALMIMMIADILKALGIGYRLKLNSLGDQHCMPAYRQKLVSFI 181

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E                    D   +     +++L  + + ++  +    A         
Sbjct: 182 ESC------------GDAICADCQRRKSTNPIRVL--DCKNEHCQNLYVNA-------PK 220

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++  L    +     L  +++    G +    L                       VRGL
Sbjct: 221 LIDNLCEGCQSDFDTLKTILEQHNIGYEIDTNL-----------------------VRGL 257

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY+   +E +                ++ GGGRYD L+    G+  PA GF++GI RL+
Sbjct: 258 DYYSKTAFEFV--------SDNIGSQSAIAGGGRYDRLIEFLDGKPTPAVGFALGIERLM 309

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             +         + E           D+ +LS   +  + +R +  +A +     ++   
Sbjct: 310 ELI--------VMPESVREGYYLGAMDALALSPVLLAAEKIRRSD-KAVVEY-EPRSLKA 359

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            LK ADR N     + G  E ++  + +KDL +  E    + + 
Sbjct: 360 HLKGADRINARYCAVIGENELAQNSIWVKDLVEKTESLIPLNDF 403


>gi|306821792|ref|ZP_07455387.1| histidine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550159|gb|EFM38155.1| histidine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 426

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 98/466 (21%), Positives = 185/466 (39%), Gaps = 53/466 (11%)

Query: 7   LRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           ++A +   G  D   +++   + +    + + + + +   ETP  EY+    + + D  D
Sbjct: 1   MKALQRVTGTQDLFPEDLAKIDYVTGVFKEVCKVFDYKEYETPTFEYTSLFTRGIGDTTD 60

Query: 65  RPNKGVFSLQDDDG---QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH 120
             NK +F+           I+L+ + TA + R   ++       P + + I P FRNE++
Sbjct: 61  IVNKEMFTFVPRGDSQKDSITLKPEGTASIVRLYNQHNLQSKKPPLKLFYITPCFRNERN 120

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRF++F Q   + +GS A + DAE+  +     E +GI  ++  + IN+    +   +
Sbjct: 121 QKGRFKEFHQFGTEILGSDAASTDAEIITLAYRFFERLGIM-DNITLEINSVGGFES-RK 178

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  D L E    L      +++    ++++  +  +          N  ++   +M
Sbjct: 179 AYNEKLRDFLKEDYDNL-CETCKERYDKNPMRIIDCKEES---------CNKITKDAPLM 228

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  +S + ++   ++  L+                            +  ++  IVRGL+
Sbjct: 229 IDNISQEEKEHFEKVKRLLDAA-----------------------DVKYVVNPNIVRGLD 265

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   +E +                +V GGGRYDGLV    G ++   GF +GI RLI+
Sbjct: 266 YYTKTAFEFV--------SHNIGSQATVCGGGRYDGLVKELGGADISGVGFGLGIERLIM 317

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L  L        E     +       ++  K       LR  GI  +      K+   Q
Sbjct: 318 TLDELGKMPEFKVEYD---LYIASLGEEADVKSFEIVDNLRKKGIVCDKDHVQ-KSLKAQ 373

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +KYAD +N    ++ G  E   G   +KD+    +   ++ N E  
Sbjct: 374 MKYADDKNAHYTLMLGENELESGKAILKDMTSSTQTEVKLDNFEEE 419


>gi|167632613|ref|ZP_02390940.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170685114|ref|ZP_02876339.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|167532911|gb|EDR95547.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170671374|gb|EDT22112.1| histidyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 426

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 128/464 (27%), Positives = 216/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +R++I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEIRNVKGTKDYLPEEQVLRSKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLQLSIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++  F+G ++  P  G S G+  +  AL  
Sbjct: 280 YEIFLKDGSIASS--------IGSGGRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALSQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 332 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E     + ++++ +G E+   + +  ++ 
Sbjct: 383 ANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSSLSNYL 426


>gi|270047656|pdb|3HRI|A Chain A, Histidyl-Trna Synthetase (Apo) From Trypanosoma Brucei
 gi|270047657|pdb|3HRI|B Chain B, Histidyl-Trna Synthetase (Apo) From Trypanosoma Brucei
 gi|270047658|pdb|3HRI|C Chain C, Histidyl-Trna Synthetase (Apo) From Trypanosoma Brucei
 gi|270047659|pdb|3HRI|D Chain D, Histidyl-Trna Synthetase (Apo) From Trypanosoma Brucei
 gi|270047660|pdb|3HRI|E Chain E, Histidyl-Trna Synthetase (Apo) From Trypanosoma Brucei
 gi|270047661|pdb|3HRI|F Chain F, Histidyl-Trna Synthetase (Apo) From Trypanosoma Brucei
          Length = 456

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 103/445 (23%), Positives = 190/445 (42%), Gaps = 39/445 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E  +G  D P + +R+R  + D   +    +GF+  ++P+LE  +   +   +E    + 
Sbjct: 30  EPVQGCRDFPPETMRLRKYLFDVFHSTARKFGFEEYDSPVLESEELYIRKAGEE--ITEQ 87

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +F+     G  ++LR ++T  LAR +     +++ P + Y I   +R E    GR R+  
Sbjct: 88  MFNFITKGGHRVALRPEMTPSLARQLLAKGRSLLLPAKWYSIPQCWRYEAITRGRRREHY 147

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q ++D +G  + +++ E+       ++++G+   D  + IN+RKIL  ++E+ G+  D  
Sbjct: 148 QWNMDIIGVKSVSSEVELVCAACTAMQSLGLSSKDVGVKINSRKILQTVVEQAGVSAD-- 205

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +   V   +DK++K   + V   L                L S  +D + S LS    
Sbjct: 206 --KFAPVCVIVDKMEKLPREEVVAQLA------------AIGLESNVVDAITSTLS---- 247

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +  + E+ +      +   EL      +   G+  + +   +++VRGL YYTG V+E 
Sbjct: 248 --LKTIDEIAQRIGEEHEAVRELRDFITQIEAYGFG-DWVIFDASVVRGLAYYTGIVFEG 304

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALKSLESS 368
                      +   F ++ GGGRYD L++ +     VP  GF  G   ++  L   +  
Sbjct: 305 F---------DRDGNFRALCGGGRYDNLLTTYGSPTAVPCVGFGFGDCVIVELLNEKKLL 355

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                    V    +  D           + LR AG  A++     K       YADR  
Sbjct: 356 PELHH---VVDDLVIPFDETMRPHALSILRRLRDAGRSADIVFD-KKKVVQAFNYADRIG 411

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKG 453
              A++    E +RG +++K L +G
Sbjct: 412 ALRAVLVAPDEWARGEVRVKMLREG 436


>gi|261749346|ref|YP_003257031.1| histidyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497438|gb|ACX83888.1| histidyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 466

 Score =  216 bits (549), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 124/475 (26%), Positives = 210/475 (44%), Gaps = 51/475 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
             +P+G  D  + E+  RN ++  IRN +E +GF PIETP  E   +L GK+  + D   
Sbjct: 4   PSIPKGTRDFSSMEMNKRNYLIQIIRNKFELFGFSPIETPSFEKISTLMGKYGEEGDYL- 62

Query: 68  KGVFSLQDDDGQWI---------------------SLRYDLTAPLARYVAENFDTIVFPC 106
             +F L    G ++                     +LRYDLT P  RYV  + + IVFP 
Sbjct: 63  --MFKLL-HSGDFLRKKKENPVFNNQYFIKHISNKALRYDLTIPFVRYVVMHRNEIVFPF 119

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           + Y+I PV+R +K    RFR+F QCD D +G+ + ++  +    +    E          
Sbjct: 120 KRYQIQPVWRADKPQKERFREFYQCDADMIGTYSLSSLWQEVEFIQLCDEIFTELNFPII 179

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I IN+R IL G++E  G+    + +       ++DK +K G   VK  +           
Sbjct: 180 ININHRDILGGLVEISGI----ENHLWKDFTTSLDKWEKKGRNIVKKEMLRK-------- 227

Query: 227 TKGANLTSEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                ++S   + +  F  +  +  K +  L    + +  G+KG  +L  I + ++    
Sbjct: 228 ----GISSNSFEKIACFFDMKENFSKKIESLTVAFQSSERGKKGIKDLSFIFQKIKNISL 283

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
              ++K + ++ RG+ YYTG ++E        +   K     S+GGGGRYD L S F  +
Sbjct: 284 KKTKLKWNVSLARGMNYYTGPIFEIFPDKDNKDSCMK----NSIGGGGRYDQLSSFFGMK 339

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           N+   G S+G+ R+ +A++     +        VL      +             LR  G
Sbjct: 340 NLSGVGVSLGLDRIYLAMEKENLFSTISSSSSKVLFINFGDEEVL--YAYNMINFLRKKG 397

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           I  +++  + K    Q +YA+  + P AI  G  E  +  +++K+L K  E   +
Sbjct: 398 ISTQLYPNAVK-ISKQFRYANENHIPFAISIGKNEIEKKKIRVKNLKKRIETEYD 451


>gi|228928378|ref|ZP_04091419.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228831425|gb|EEM77021.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 425

 Score =  216 bits (549), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 128/464 (27%), Positives = 213/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLQLSIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     +     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TVSSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E     + ++++ +G E+   + +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSSLSNYL 425


>gi|228934611|ref|ZP_04097445.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228825004|gb|EEM70802.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 425

 Score =  216 bits (549), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 129/464 (27%), Positives = 213/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLQLSIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E     + ++++ +G E+   + +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSSLSNYL 425


>gi|241667736|ref|ZP_04755314.1| histidyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876280|ref|ZP_05248990.1| histidyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842301|gb|EET20715.1| histidyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 424

 Score =  216 bits (549), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 102/494 (20%), Positives = 189/494 (38%), Gaps = 87/494 (17%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           +  + RGF D   +E      +   I++I + Y +D +  P+LE S+   + + +  D  
Sbjct: 3   KLTIIRGFNDILPQESCKWQFLESKIKSILDKYNYDEVRLPVLEKSELFHRSVGETSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K  +   D  G+ ++LR + TA   R V EN         + +  GP+FR E+   GR+
Sbjct: 63  SKETYDFVDRSGESLTLRPEGTAGCVRMVIENSLANRGQTQKLWYSGPMFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q  V+  G      D E+  +  +    +GI                     K L 
Sbjct: 123 RQFYQLGVEAYGYDNIAIDLEILTISWNLFRELGISECVKLELNSLGSSSNRQEYTKALL 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L+      D+            D + +     +++L  +                   
Sbjct: 183 EYLKPYHAQLDE------------DSIRRLDKNPLRILDSKNEQTQQVLV---------N 221

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ F+  D      +  E +                              +++  +V
Sbjct: 222 APKLIDFIDEDSLARFEQTCEYLDNL-----------------------GVNYQVNQKLV 258

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY+G V+E +          +     +V  GGRYD L+    GQ   A GF+IG+ 
Sbjct: 259 RGLDYYSGLVFEWVT--------DRLGAQAAVCAGGRYDNLIESLGGQKTGAIGFAIGLE 310

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSS 414
           RL++ L+S         +     I     D++ L +  +  + +R     ++ +M L   
Sbjct: 311 RLLLLLESEGKLPIEDDKSDVFFIL----DNNQLHRSLLLVENVRQELPALKIDMDLKFG 366

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +F +Q K AD+ +  +A+I G  E  +  + +K L + K+                 Q 
Sbjct: 367 -SFKSQFKKADKSDAKIAVIIGQDELLQQTVGVKYLQQDKQ-----------------QE 408

Query: 475 TIPISELVSTVKKI 488
            IP+++L++ ++KI
Sbjct: 409 QIPLNKLINFLEKI 422


>gi|116490653|ref|YP_810197.1| histidyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290890067|ref|ZP_06553150.1| hypothetical protein AWRIB429_0540 [Oenococcus oeni AWRIB429]
 gi|116091378|gb|ABJ56532.1| histidyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290480258|gb|EFD88899.1| hypothetical protein AWRIB429_0540 [Oenococcus oeni AWRIB429]
          Length = 422

 Score =  216 bits (549), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 96/465 (20%), Positives = 173/465 (37%), Gaps = 64/465 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
            + P+G AD       I ++I  + + I+   Y F  I+TPL E  +   +   D  D  
Sbjct: 6   FQKPKGTADLLPAVQAIWDKINRAAQEIFGRRYRFGRIDTPLFENYEIFARTSGDSSDVV 65

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPG 123
           +K ++   D   + ++LR + TA + R   EN         P   Y +  +FR E+   G
Sbjct: 66  SKEMYDFYDKGNRHLALRPEGTAGVVRAYVENKLYGPEYEKPVNLYYLESMFRYERPQAG 125

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG----IKRNDYHIGINNRKILDGIL 179
           R R+F Q  V++ GS +   DA++  M  D  +       I + +      +R      L
Sbjct: 126 RTREFHQLGVESFGSDSPFLDAQIIQMAIDFFQEFNLDNFIVKINSLGDEESRTNYRSAL 185

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                  +D+L        + D  ++     +++L  +   D                  
Sbjct: 186 VDYLKQFEDRL--------SNDSKNRLKSNPLRILDSKDPKDQELLI---------DAPK 228

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L+ + +    ++ + +       +  N+L                       VRGL
Sbjct: 229 ILDYLNQESKDRFKKVTKALDDFDISYEIDNKL-----------------------VRGL 265

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   ++E     P +          +V GGGRY G+V  F G   PA GF IG     
Sbjct: 266 DYYNNTIFEIETRDPKLKSSA------TVCGGGRYSGMVEEFGGPETPAIGFGIG----- 314

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFG 418
             L+ L +    I++     +  +  D        +  + LR        +   + ++  
Sbjct: 315 --LERLITLVGQIEDQDHNDVYIVQTDKSVNEFANLLAKRLREKFHFGVLLDY-TDRSMK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +QLK ADR     +I+ G  E     + IK +A G +    +   
Sbjct: 372 SQLKSADRTKSRYSIVIGEEEVKNKKVTIKKMADGSQKKILLDKL 416


>gi|49479017|ref|YP_037440.1| histidyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81395406|sp|Q6HG86|SYH1_BACHK RecName: Full=Histidyl-tRNA synthetase 1; AltName:
           Full=Histidine--tRNA ligase 1; Short=HisRS 1
 gi|49330573|gb|AAT61219.1| histidine--tRNA ligase (histidyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 425

 Score =  216 bits (549), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 128/464 (27%), Positives = 213/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAIHIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLQLSIADFEEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     +     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TVSSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E     + ++++ +G E+   + +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSSLSNYL 425


>gi|218884522|ref|YP_002428904.1| histidyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218766138|gb|ACL11537.1| histidyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 440

 Score =  215 bits (548), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 95/483 (19%), Positives = 194/483 (40%), Gaps = 48/483 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M ++  L    PRG  D    +  +   +++  +      GF PI TP +EY     K  
Sbjct: 1   MSEEDVLNP--PRGMRDLTGVDAELHEYMVELFKETARRNGFKPIITPTVEYFRLFEKKS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E + +  ++  QD  G+ ++LR ++TA + R   +   +   P R Y +   FR E+ 
Sbjct: 59  GEEIKRS--MYVFQDKAGRTLALRPEVTASVVRAYLKEMRSQPKPIRLYYVAQCFRYEEP 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              R+R+F Q  ++ +G     AD       ++ LE +G+K   ++  + N      I++
Sbjct: 117 QKARYREFWQGGLEIIGDPDINADVSAAFTASNFLEELGVK---HYYVVGNVATYRVIMD 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +IG+  + +                     V  L+ + R   +    +      + +++ 
Sbjct: 174 RIGIPEETQ-------------------DLVLHLIDKDRVGEALQVLRDKTSREDIVELF 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L+  +++++  + +            +EL    E +               +VRGL 
Sbjct: 215 GRLLNSGIDEALSVIMDFKGLGEGYSIIESELAKTREFIELLNQVGFNAAYEPKLVRGLA 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++E          K    +  S+GGGGRYDGL   + G+   +TG ++G+ R+++
Sbjct: 275 YYTGLIFE---------YKTSGGLSVSIGGGGRYDGLTRVYGGEYEYSTGLALGLDRIML 325

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L   +   +         +     +   L       + +R  G   E+    +++    
Sbjct: 326 LLDPGKILPSK------TTVLISILEGVPLKAGYELVRRIRVKG--VEVIPYRARSLSKA 377

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE---ARVAQITIP 477
           L  A++ N  L +I G  E   G + +K++  G++    + +  ++ +      AQ   P
Sbjct: 378 LSLANKINAGLVVIIGRREYESGSITVKNMITGEQKYIGLNDINAFLDYIKGAGAQQ--P 435

Query: 478 ISE 480
             +
Sbjct: 436 QDD 438


>gi|169797242|ref|YP_001715035.1| histidyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|215484683|ref|YP_002326918.1| histidyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|239500764|ref|ZP_04660074.1| histidyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|260556124|ref|ZP_05828343.1| histidyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301509973|ref|ZP_07235210.1| histidyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|332851253|ref|ZP_08433326.1| histidine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|226737061|sp|B7H068|SYH_ACIB3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558639|sp|B0V5G6|SYH_ACIBY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|169150169|emb|CAM88063.1| histidyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213986004|gb|ACJ56303.1| histidyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260410179|gb|EEX03478.1| histidyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|332730133|gb|EGJ61460.1| histidine--tRNA ligase [Acinetobacter baumannii 6013150]
          Length = 430

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 96/471 (20%), Positives = 167/471 (35%), Gaps = 62/471 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDVLPTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ M+ A   + +G+        +     + R      L     
Sbjct: 128 QFGVETFGVATPDIDAELIMLTARLWKRMGVDHMVQLELNTLGETDERTEYRNALVAFLN 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L+E        D   +     +++L  +  +              E    +  FL
Sbjct: 188 EHKDALDE--------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKLHDFL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D      +L + +                            +  I+  +VRGL+YY  
Sbjct: 231 KEDSLSHFQQLQDYLTAA-----------------------GIKFVINQKLVRGLDYYNK 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 G+V  GGRYDGLV + KG+   +         +   L  
Sbjct: 268 TVFEWTTTA--------LGSQGTVCAGGRYDGLVGQLKGKADQSVPAVGFAMGMERLLLL 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKNFGNQ 420
           LE                   +    SK  +  + LR     A     +  GS  +  +Q
Sbjct: 320 LEQVEQAEIVRDCEAFLVA--EPAYQSKALVLAEQLRDQLEAANSNIRIKTGSQGSMKSQ 377

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           +K AD+     AII G  E     L +K+LA  ++    +     +   + 
Sbjct: 378 MKKADQAGAVYAIILGEREWEAQQLAVKELATAEQSQVALAELVPFLIEKF 428


>gi|299771616|ref|YP_003733642.1| histidyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701704|gb|ADI92269.1| histidyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 430

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 94/471 (19%), Positives = 167/471 (35%), Gaps = 62/471 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDVLPTQTVAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ M+ A   + +G+        +     + R      L     
Sbjct: 128 QFGVETFGVATPDIDAELIMLTARLWKRMGVADKVQLELNTLGETDERTEYRNALVAFLN 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L+E        D   +     +++L  +  +              E    +  FL
Sbjct: 188 EHKDALDE--------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKLHDFL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D      +L + +                            +  I+  +VRGL+YY  
Sbjct: 231 KEDSLDHFKQLQDYLTAA-----------------------GIQFVINQKLVRGLDYYNK 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 G+V  GGRYDGLV + KG+   +         +   L  
Sbjct: 268 TVFEWTTTA--------LGSQGTVCAGGRYDGLVGQLKGKPDQSVPAVGFAMGMERLLLL 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKNFGNQ 420
           LE            +      +    +   +  + LR     A     +  GS  +  +Q
Sbjct: 320 LEQVEQAEVIRDCEVFLVA--EPAYQTNALILAEQLRDQLEAANSSIRIKTGSQGSMKSQ 377

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           +K AD+     A+I G  E       IK+LA  ++    I +   +   + 
Sbjct: 378 MKKADQAGAIFALILGEREWEAQQFAIKELATAEQSQVAIADLVPFLIQKF 428


>gi|297180270|gb|ADI16489.1| histidyl-tRNA synthetase [uncultured bacterium HF4000_05M23]
          Length = 427

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 97/473 (20%), Positives = 181/473 (38%), Gaps = 52/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG AD   ++    + +  + R I   +G+  I+TP  E +    + + D  D 
Sbjct: 1   MNFKRPRGTADILPEDQPYWSHVYAAARKIAAQFGYQRIDTPSFEDTKLFQRGVGDATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
             K ++S +D  G  I+LR + TA + R   EN       P R + + P+FR E+   GR
Sbjct: 61  VQKEMYSFEDHGGDSITLRPEGTASVCRAYIENGLHNGPQPVRMFYMAPMFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIG 183
            RQ  Q  V+ +G  +   DAE+  +    +  +GIK     +    + +     +  + 
Sbjct: 121 VRQHHQFGVEAIGDGSPEVDAEIIELGWKYISELGIKGFKLRLNNLADPEGRADYISDLD 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  +++          D+L K     ++            +    A+   + +D +   
Sbjct: 181 RYFTERI----------DQLPKIDQDRLQRAPLRVLDSKVKETQTLADDAPKSVDYI--- 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                 ++      L+      +  + E                   +   +VRGL+YY 
Sbjct: 228 ----GGETRDHWDALLALLDNLKSVYTEF---------------SYSVDHRLVRGLDYYN 268

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E         +       G++  GGRYD L+    GQ  P  GF  GI R+I+ +K
Sbjct: 269 RTVFE--------YDPADAGSQGTLLAGGRYDPLIGILGGQETPGIGFGSGIERMILEMK 320

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E      +    V++   D  S +               +   +     ++   Q++Y
Sbjct: 321 KQEVRVEQPEGPEIVVVALGDTGSVAAGLAAGLRAA----DVSTVLAPK--RSIKAQMRY 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKG---KELSREIKNNESWREARVAQ 473
           A+       +I G  E  +G+ Q+K LA+G    E+S   ++  S+  +   Q
Sbjct: 375 ANNLGAANVVILGDREVEQGVAQVKSLAEGGGQSEVSLNAESISSFVRSVENQ 427


>gi|196032274|ref|ZP_03099688.1| histidyl-tRNA synthetase [Bacillus cereus W]
 gi|195995025|gb|EDX58979.1| histidyl-tRNA synthetase [Bacillus cereus W]
          Length = 426

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 129/464 (27%), Positives = 216/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLQLSIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++  F+G ++  P  G S G+  +  AL  
Sbjct: 280 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALSQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 332 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E     + ++++ +G E+   + +  ++ 
Sbjct: 383 ANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSSLSNYL 426


>gi|72390065|ref|XP_845327.1| histidyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62360426|gb|AAX80840.1| histidyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801862|gb|AAZ11768.1| histidyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
 gi|261328724|emb|CBH11702.1| histidyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 477

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 103/445 (23%), Positives = 190/445 (42%), Gaps = 39/445 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E  +G  D P + +R+R  + D   +    +GF+  ++P+LE  +   +   +E    + 
Sbjct: 51  EPVQGCRDFPPETMRLRKYLFDVFHSTARKFGFEEYDSPVLESEELYIRKAGEE--ITEQ 108

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +F+     G  ++LR ++T  LAR +     +++ P + Y I   +R E    GR R+  
Sbjct: 109 MFNFITKGGHRVALRPEMTPSLARQLLAKGRSLLLPAKWYSIPQCWRYEAITRGRRREHY 168

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q ++D +G  + +++ E+       ++++G+   D  + IN+RKIL  ++E+ G+  D  
Sbjct: 169 QWNMDIIGVKSVSSEVELVCAACTAMQSLGLSSKDVGVKINSRKILQTVVEQAGVSAD-- 226

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +   V   +DK++K   + V   L                L S  +D + S LS    
Sbjct: 227 --KFAPVCVIVDKMEKLPREEVVAQLA------------AIGLESNVVDAITSTLS---- 268

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +  + E+ +      +   EL      +   G+  + +   +++VRGL YYTG V+E 
Sbjct: 269 --LKTIDEIAQRIGEEHEAVRELRDFITQIEAYGFG-DWVIFDASVVRGLAYYTGIVFEG 325

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALKSLESS 368
                      +   F ++ GGGRYD L++ +     VP  GF  G   ++  L   +  
Sbjct: 326 F---------DRDGNFRALCGGGRYDNLLTTYGSPTAVPCVGFGFGDCVIVELLNEKKLL 376

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                    V    +  D           + LR AG  A++     K       YADR  
Sbjct: 377 PELHH---VVDDLVIPFDETMRPHALSILRRLRDAGRSADIVFD-KKKVVQAFNYADRIG 432

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKG 453
              A++    E +RG +++K L +G
Sbjct: 433 ALRAVLVAPDEWARGEVRVKMLREG 457


>gi|294053549|ref|YP_003547207.1| histidyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293612882|gb|ADE53037.1| histidyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 441

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 117/485 (24%), Positives = 205/485 (42%), Gaps = 44/485 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ +   GF +   +    RN I D  R   +++ F   + P+LE  +   +   +E   
Sbjct: 1   MQFDTLPGFREFYPEACARRNAIFDVWRRTAQSFNFLEYDAPVLEPLELYIEKSGEEIVG 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ +D  G+ +++R ++T  LAR V    +++  P + + +G  +R E+   GR R
Sbjct: 61  --QLFNFEDRGGRAVAMRPEMTPSLARLVGAKANSLKRPVKWFSVGEFYRYERPQKGRLR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
            F Q +VD  G     ADAE+  +   TL+  G+   D+ I +++R +   +L       
Sbjct: 119 AFYQFNVDIFGEPGSGADAELIALCVQTLKGFGLSDADFKIRLSDRDLW--LLMLAAEGL 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           DD  +  +  L  IDK+++   + V   L E   D +  F        E + I       
Sbjct: 177 DDAASMAV--LGIIDKMERMDREKVIEKLAEVFGDAAEAFF---GRIEEAVAIREFDALC 231

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              +++    EL     A    +  L+        +G+    I+I   IVRGL YYTG V
Sbjct: 232 SYIEALPLEGELADKAAARLDDWRSLMASLTNAGAAGF----IQIDLGIVRGLAYYTGFV 287

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EA          +      ++ GGGRYD LV +  G  +PA GF++G   L   L+S  
Sbjct: 288 FEAF---------EATGAGRALAGGGRYDALVKKLGGPEMPAVGFAMGDVTLADLLESKG 338

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +  +    + I      + +          LR AG+  + +    + FG Q K A +
Sbjct: 339 RLPDVNQAPDCIAII---GGAAARPAAMEDAATLRAAGVSVD-YPLKDQGFGKQFKAATQ 394

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                A+I G+ E  RG+++++DL   +E                    +   EL+ T+ 
Sbjct: 395 SGASFALIYGSEELERGVVKVRDLKAAEE------------------QDVAREELLLTIC 436

Query: 487 KILQE 491
           K+L  
Sbjct: 437 KLLNR 441


>gi|171732|gb|AAA34695.1| histidine-tRNA synthetase mitochondrial [Saccharomyces cerevisiae]
          Length = 546

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 135/526 (25%), Positives = 228/526 (43%), Gaps = 71/526 (13%)

Query: 3   KKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           KK KL+   + P+G  D    ++ IR  I  ++  +++ +G   I+TP+ E  + L    
Sbjct: 47  KKGKLQVSLKTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKY 106

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K +++L+D  G+  SLRYDLT P ARYVA N    +   + Y I  V+R ++ 
Sbjct: 107 GED---SKLIYNLEDQGGELCSLRYDLTVPFARYVAMNN---IQSIKRYHIAKVYRRDQP 160

Query: 121 --GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
               GR R+F QCD D      +   D+E   ++ + L ++GIK  D+ I +N+RKILDG
Sbjct: 161 AMTKGRMREFYQCDFDVAGTFESMVPDSECLSILVEGLTSLGIK--DFKIKLNHRKILDG 218

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I +  G+  +D       +  A+DKLDK   + VK  + E               + E  
Sbjct: 219 IFQIAGVKDED----VRKISSAVDKLDKSPWEAVKKEMTEE-----------KGQSEETA 263

Query: 238 DIMVSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           D +  ++ ++       ++      +      ++G +++  + +       +S  I    
Sbjct: 264 DKIGEYVKLNGSLKEIHAVLSADANITSNEKAKQGLDDIATLMKYTEAFDIDS-FISFDL 322

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKP--------------VVFGSVGGGGRYDGLVS 339
           ++ RGL+YYTG +YE +       E                  V  GS+  GGRYD LV+
Sbjct: 323 SLARGLDYYTGLIYEVVTSASAPPENASELKKKAKSAEDASEFVGVGSIAAGGRYDNLVN 382

Query: 340 RFKG------QNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---S 389
            F          +P  G S G+ R+   +K    SST        V +       D    
Sbjct: 383 MFSEASGKKSTQIPCVGISFGVERIFSLIKQRINSSTTIKPTATQVFVMAFGGGKDWTGY 442

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +    T+ L  AGI AE    +  N   Q     +  C +A+I G  E   G L++K 
Sbjct: 443 LPERMKVTKQLWDAGIEAEYVYKAKANPRKQFDTTKKAGCHIAVILGKEEYLEGKLRVKR 502

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           L  G+E + +                +  +++V  V++ L +  E+
Sbjct: 503 L--GQEFADDDGEL------------VSAADIVPIVQEKLSQIHED 534


>gi|296139658|ref|YP_003646901.1| histidyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027792|gb|ADG78562.1| histidyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 441

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 93/473 (19%), Positives = 167/473 (35%), Gaps = 75/473 (15%)

Query: 9   AELPRGFADCPT------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
            + P+G  D                 +  ++     + G+  IE P+ E +    + + +
Sbjct: 6   FQAPKGIPDYIPVPSGEKNSSADFLAVRTALLRAIADAGYGYIELPIFEDTSLFARGVGE 65

Query: 63  -EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH 120
             D   K +++  D   + ++LR + TA + R V ++       P +    GP FR E+ 
Sbjct: 66  STDVVAKEMYTFADRGDRSVTLRPEGTAGVVRAVLQHGLDRGQLPVKAAYAGPFFRYERP 125

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNR 172
             GR+RQ  Q  ++ +G      DAE+  +      +VG            D       R
Sbjct: 126 QEGRYRQLQQVGIEAIGVDDPALDAEVIAVADRAYRSVGLDGFRLEVSSLGDETCRPQYR 185

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           + L   L  + L  + +    +  LR +D                         T  A L
Sbjct: 186 EKLQEFLFALDLDEETRRRAEINPLRVLDDK----------------RPEVKAMTADAPL 229

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             + +                             +       +   +   G       ++
Sbjct: 230 MIDNL---------------------------TPEPKEHFEKVLGYLDALGVP---YVVN 259

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-VPATGF 351
             +VRGL+YYT   +E +                 +GGGGRYDGLV +  G+  V   GF
Sbjct: 260 PRLVRGLDYYTKTCFEFV--------HDGLGAQSGIGGGGRYDGLVEQLGGREGVTGVGF 311

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            +G+ R ++AL +             V+   +    D+          LR  G+ ++M  
Sbjct: 312 GLGVDRTLLALAAEGKRA---PAAPRVVAFGVPLGDDARDAMVPLLGRLRALGVPSDMAY 368

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           G ++     +K ADR     A+I G  E + G++ +KDLA G++ +  +    
Sbjct: 369 G-NRAMKGAMKAADRSGARFALILGDSELADGVVMLKDLANGEQRAVPLDTVA 420


>gi|332970233|gb|EGK09226.1| histidine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 436

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 99/473 (20%), Positives = 191/473 (40%), Gaps = 72/473 (15%)

Query: 9   AELPRGFADCP------TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
            +  +GF D        ++      R+ + ++ + + +G++ I  P++E +    + + D
Sbjct: 2   IKSIKGFNDILHVATSSSQPSSQWRRLENMLKEVLDQFGYEEIRLPIVEETQLFARAIGD 61

Query: 63  -EDRPNKGVFSLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             D   K +FS  D       ++LR + TA   R V E+        + + +GP+FR E+
Sbjct: 62  ATDIVEKEMFSFTDKSDPPTPLTLRPEGTAGAVRAVIEHNLLRGDSPKFWYMGPMFRYEQ 121

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  GS     +AE+  M     + +GI  ++  + IN+   LD  L
Sbjct: 122 PQKGRYRQFHQLGVEAFGSELVDVEAELIAMTHMMWKRLGI-DHELTLEINSLGELDERL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                  +         L   D   +     +++L  + +   +           E   +
Sbjct: 181 AYRAALVE--FLHNKKDLLDEDSQRRLTTNPLRILDSKDKNTQT---------ILENAPL 229

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  FL  + +    +L   +K                              ++  +VRGL
Sbjct: 230 LADFLGEESKAHFSQLKTYLKAL-----------------------GIEYVVNPNLVRGL 266

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-----------PA 348
           +YY   V+E +          K     +V  GGRYDGL+ + K               PA
Sbjct: 267 DYYNKTVFEWVT--------DKLGSQATVCAGGRYDGLIGQLKSIGKSVDKAKAVKSDPA 318

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            GF++G+ RL++ ++++            V++       +  ++  +Y Q LR A  R++
Sbjct: 319 VGFAMGLERLLLLVQAINPMPETTSCDIFVVVHP-----ELYAQGLLYAQSLRGA--RSD 371

Query: 409 --MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
             + + S+ +   Q+K AD+    L +I G  E   G + IK +  G+++S++
Sbjct: 372 LRIKMSSANSLKAQMKKADKSGAKLTVILGQDEIENGTISIKTMETGEQVSQD 424


>gi|269959126|ref|YP_003328915.1| histidyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848957|gb|ACZ49601.1| histidyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 430

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 117/454 (25%), Positives = 180/454 (39%), Gaps = 56/454 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    RG  D   +E      I D   ++ E YGF P+ETP+ E+ D   K L D  D  
Sbjct: 5   KLRPVRGTRDLSPEECYKFWYIRDIAHSMGERYGFVPVETPIFEFQDVFLKTLGDSSDII 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++S  D  G  + LR +LTA +AR +      +    R +  GPVFR E+    R R
Sbjct: 65  GKEMYSFPDRGGDVLVLRPELTAAVARMLICERLALP--ARLFTFGPVFRYERPQKCRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + ++ G +  TADAE+  +  D L A+ + RN  H+ IN+    D IL K     
Sbjct: 123 QFHQINYEHFG-AGCTADAELMALAYDILGALNL-RNKVHLEINSLGSQDSIL-KYKSSL 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
               +E    L   D   +     +++L  + R D        A + ++       F   
Sbjct: 180 LQYFSEHEHALS-GDSRRRVHTNPLRILDSKDRGD--MAILCNAPVVAD-------FYDD 229

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + + +   +   +            L                       VRGL+YY G V
Sbjct: 230 ESKMAFDGVVRQLDNLGIPHTVNPRL-----------------------VRGLDYYCGVV 266

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E                  +V  GGRYD LV+   G NVPA GF+ G+ RL        
Sbjct: 267 FEFKTT--------CLGAQDAVIAGGRYDKLVASMGGDNVPAVGFAGGMERLASL----- 313

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +        +  +     ++         LR+ GIR     G+ +     LK+ADR
Sbjct: 314 ---VDYSHGTGFSVAFLPLGEGAVECAMRSAYELRSRGIRVLCD-GAVEKLKIGLKHADR 369

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
               LA+I G  E ++G +  + +A G + +  I
Sbjct: 370 SGVDLALILGDEEIAKGEVLCRHMATGAQETVSI 403


>gi|281357087|ref|ZP_06243577.1| histidyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316645|gb|EFB00669.1| histidyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 426

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 90/465 (19%), Positives = 169/465 (36%), Gaps = 52/465 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPNKG 69
            P G AD   +E R    +  +   ++  YG+  + TP+ EY++   + L  + +   K 
Sbjct: 6   PPPGTADIFPEEARRWRNLEAAAGTVFSRYGYGELRTPIFEYTEVFQRGLGDETEVVQKE 65

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +++  D  G+ ++LR + TA + R ++          R Y  GP+FR E+   GR RQF 
Sbjct: 66  MYTFLDRGGRSLTLRPEGTAGVMRALSNTDVLNGVEQRVYYHGPMFRGERPAAGRRRQFH 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+NVG  A   DAE   M+ + L  +GI                             
Sbjct: 126 QIGVENVGRIAPLIDAECIAMLMEFLREIGIPDAK------------------------- 160

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ-IDIMVSFLSIDL 248
                  L    +           LL +       +         E+ +  ++       
Sbjct: 161 -------LSINTRGVMPDRGPAGQLLRDYFGSRIHEMCDDCKARLERNVWRILDCKQEAC 213

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            K + +  + V    A  +       +   +   G       +   +VRGL+YY   V+E
Sbjct: 214 RKFVADAPDYVASFSA--ESRAYFDEVKAALTALG---VEYTVDPLLVRGLDYYVHTVFE 268

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                             ++ GGGRY+ L    + + V   GF+ G+ RL++   +L+ +
Sbjct: 269 VTHTG--------LGAQTAIAGGGRYE-LFLPGQNRPVQGVGFAAGMERLLMVQDALKVN 319

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
               +      +  +   + +          LR AG++  + L   ++F  QL+ A++  
Sbjct: 320 PAKEEPTP---VYLVGLGAAARMANLKLAGELRRAGMKVALELEE-RSFKAQLRSANKAG 375

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +++G  E  + +  +K +A G +                 Q
Sbjct: 376 ASFTVVRGEAELEKKIAMVKTMADGSQSEVPEAGLFDTLLKLTRQ 420


>gi|310658348|ref|YP_003936069.1| histidyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308825126|emb|CBH21164.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Clostridium sticklandii]
          Length = 430

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 122/464 (26%), Positives = 206/464 (44%), Gaps = 35/464 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG-KF 59
           M K   ++  +  GF +    E RI + I   I  +YE  G  PI+TP++E +D L  K 
Sbjct: 1   MSK-NFIKPSILPGFMELLPNEQRIFDDIATKILKVYEKNGCYPIDTPVIEKADVLLVKS 59

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             +     K V++ Q      ++LR+DLT P ARYVA++ + + FP + Y++G V+R E+
Sbjct: 60  GGET---EKQVYAFQ-KGKNDLALRFDLTVPFARYVAQHINELEFPFKRYQLGKVYRGER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
           +  GR+R+F Q D+D +     + D +  ++   +     IK  +Y   I+NRKIL GI 
Sbjct: 116 NQRGRYREFYQLDIDVINKDKLSVDNDAWVISLASQAFKEIKLPNYKFQISNRKILSGIF 175

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E + +    +          IDK DK      K  L +   +    F          I+ 
Sbjct: 176 EYLQIENSFETMN------LIDKYDKMPTNEFKAELEKLIGEEKSSF----------INK 219

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++S     ++  +    +         +G NE+  + +++     +     I+  I+RGL
Sbjct: 220 IMSIDGSSVQ--IINQLKAFNINETYAEGVNEIARVVKMLDILKVDEKEYDINLKIIRGL 277

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG V+E  L             +GS+  GGRYD L   +    +P  G SIG++RL 
Sbjct: 278 DYYTGTVFETKLIGNE--------SYGSICSGGRYDNLAENYTDTVLPGVGISIGLTRLF 329

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L+ +              I       D++    +    L   G RA ++   + +   
Sbjct: 330 FVLQEIGFIDTYNLNRSDDFIIL--PLGDTMDYCSIILDKLLANGSRASIYFDDA-SLKK 386

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +LKYA+       II G  E    +++IKD+  G+E   +I + 
Sbjct: 387 KLKYANNLKIQKVIIVGEEEVKNKIVKIKDMLSGEEKIIKIDDL 430


>gi|15827170|ref|NP_301433.1| histidyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229648|ref|YP_002503064.1| histidyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13432210|sp|P46696|SYH_MYCLE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|3136015|emb|CAA19087.1| histidyl-tRNA synthetase [Mycobacterium leprae]
 gi|13092718|emb|CAC30002.1| histidyl-tRNA synthase [Mycobacterium leprae]
 gi|219932755|emb|CAR70587.1| histidyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 427

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 95/471 (20%), Positives = 173/471 (36%), Gaps = 68/471 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  D    +      + D +       G+  IE P+ E +    + + +  D   K +
Sbjct: 13  PKGIPDYFPPDSAQFVAVRDGLLTAARRAGYGDIELPVFEDTALFARGVGESTDVVAKEM 72

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR RQ  
Sbjct: 73  YTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGALPVKLCYAGPFFRYERPQAGRCRQLQ 132

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEK 181
           Q  V+ +G      DAE+  +      ++G            D       RK+L   L +
Sbjct: 133 QVGVEAIGVDDPALDAEVITIADAGFRSLGLDGFQLEITSLGDGTCRPQYRKLLQEFLLQ 192

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + L  D +    L  LR +D                       D        +    +++
Sbjct: 193 LDLDEDTRRRAELNPLRVLD-----------------------DKRPQVQAMTAAAPVLL 229

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             LS   ++    +   +                               I+  +VRGL+Y
Sbjct: 230 DHLSDGAKQHFDTVLAHLDAL-----------------------RVPYVINPRMVRGLDY 266

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E +                 +GGGGRYDGL+ +  GQ++   GF +G+ R ++A
Sbjct: 267 YTKTTFEFVHPG--------LGAQSGIGGGGRYDGLMRQLGGQDLSGIGFGLGVDRTLLA 318

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L +   +           +  +     +  K  M    LR AG+R ++  G  +     +
Sbjct: 319 LHAEGKTVGETTRCD---VFGVSLGEAAKLKVAMLAGQLRAAGVRVDLIYG-DRGIRGAM 374

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + A R    +A+I          + ++DLA G+++S  + +  +   +R+A
Sbjct: 375 RAAGRSGARIALIVDDCAIKADGVGVRDLATGEQISVAVDSVVAEVISRIA 425


>gi|222096790|ref|YP_002530847.1| histidyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221240848|gb|ACM13558.1| histidyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 437

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 129/456 (28%), Positives = 214/456 (46%), Gaps = 42/456 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D   K +++
Sbjct: 8   KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 67

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR+FIQCD
Sbjct: 68  LQDQGKRALALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 126

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  +     
Sbjct: 127 VDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQAINIPTE----L 179

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V+ ++DK++K G+ GV+  + E              ++ E  D + + +   L+ S+
Sbjct: 180 TSDVILSLDKIEKIGIDGVQKDVLER------------GISEEMADTICNTVLSCLQLSI 227

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  E          G NEL  + + +   G N N I  +  + RGL  YTG VYE  L 
Sbjct: 228 ADFKEAF-NNPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTVYEIFLK 285

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLIVALKSLESSTN 370
              +           +G GGRYD ++  F+G ++  P  G S G+  +  AL   E    
Sbjct: 286 DGSITSS--------IGSGGRYDNIIGAFRGDDMNYPTVGISFGLDVIYTALSQKE---- 333

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYADRRNC 429
            +     V I  +  +     +     Q LR+   ++ E+ L + +     L YA++ N 
Sbjct: 334 TVSSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNYANKENI 388

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           P  +I G  E S   + ++++ +G E+   + + + 
Sbjct: 389 PYVLIIGEEELSTETVVLRNMKEGSEVKVPLSSLKD 424


>gi|262371651|ref|ZP_06064930.1| histidyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262311676|gb|EEY92761.1| histidyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 430

 Score =  215 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 93/473 (19%), Positives = 168/473 (35%), Gaps = 62/473 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +      +   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDTLPSQTAAWRSLEQQLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGNPPESLTLRPEGTAGCVRAMLEHNLLRGATPRVWYVGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ +M A     +G+        +     + R      L     
Sbjct: 128 QFGVETFGVATPDIDAEIILMTARLWNRMGVVDKVQLELNTLGETDERTEYRNALVAFLN 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L+E        D   +     +++L  +  +              E    +  FL
Sbjct: 188 EHKDALDE--------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKLHDFL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D     ++L + +                            +  I+  +VRGL+YY  
Sbjct: 231 KEDSLNHFNQLQQYLTDA-----------------------GIQFVINQKLVRGLDYYNK 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 G+V  GGRYDGLV + KG+   +         +   L  
Sbjct: 268 TVFEWTTT--------MLGSQGTVCAGGRYDGLVGQLKGKADQSVPAVGFAMGMERLLLL 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLGSSKNFGNQ 420
           LE            +      +    +K  +  + +R              GS  +  +Q
Sbjct: 320 LEQVEQAKPVRDCEVFLLA--EPAYQAKALVLAEQVRDELEAVNSSIRFKTGSQGSMKSQ 377

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +K AD+     A+I G  E     L +K+LA G++    +    ++   +  Q
Sbjct: 378 MKKADQSGAIYAVILGEREWESQQLLVKELATGEQSQVAVTELTAFLLEKFKQ 430


>gi|325124479|gb|ADY84002.1| histidyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 430

 Score =  215 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 95/471 (20%), Positives = 171/471 (36%), Gaps = 62/471 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDILPSQTVAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFSDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ M+ A   + +G+        +     + R      L     
Sbjct: 128 QFGVETFGVATPDIDAELIMLTARLWKRMGVADKVQLELNTLGETDERTEYRNALVAFLN 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L+E        D   +     +++L  +  +              E    +  FL
Sbjct: 188 EHKDALDE--------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKLHDFL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                                E+  +    + + +  +G    +  I+  +VRGL+YY  
Sbjct: 231 K--------------------EESLDHFKQLQDYLTAAG---IQFVINQKLVRGLDYYNK 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 G+V  GGRYDGLV + KG+   +         +   L  
Sbjct: 268 TVFEWTTTA--------LGSQGTVCAGGRYDGLVGQLKGKPDQSVPAVGFAMGMERLLLL 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKNFGNQ 420
           LE            +      +    +K  +  + LR     A     +  GS  +  +Q
Sbjct: 320 LEQVEQAQVIRDCEVFLVA--EPAYQTKALILAEQLRDQLEAANSSIRIKTGSQGSMKSQ 377

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           +K AD+     A+I G  E     L IK+LA  ++    +     +   + 
Sbjct: 378 MKKADQAGAVYAMILGEREWEAQQLAIKELATAEQSQVALAELVPFLIEKF 428


>gi|52142218|ref|YP_084611.1| histidyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81687158|sp|Q638Q6|SYH1_BACCZ RecName: Full=Histidyl-tRNA synthetase 1; AltName:
           Full=Histidine--tRNA ligase 1; Short=HisRS 1
 gi|51975687|gb|AAU17237.1| histidine--tRNA ligase (histidyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 425

 Score =  215 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 128/464 (27%), Positives = 214/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG   +ETP L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKSLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLRDQGKRELALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILESINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 ER----TSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  +    T    +G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLSIDDFKDAF-NTPLVAEGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADIFIIPIGTE----LQCLQIAQQLRSTTSLKVELEL-TGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S     ++++ +G E+   + +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEELSTETAMLRNMKEGSEVKVPLSSLSNYL 425


>gi|89257070|ref|YP_514432.1| histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|167009457|ref|ZP_02274388.1| histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368308|ref|ZP_04984327.1| histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|123401535|sp|Q2A1H0|SYH_FRATH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|89144901|emb|CAJ80246.1| Histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|134254117|gb|EBA53211.1| histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
          Length = 421

 Score =  215 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 103/484 (21%), Positives = 180/484 (37%), Gaps = 69/484 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           +  + RGF D    +      +   ++ I + Y +     P++E S+   + + +  D  
Sbjct: 3   KLTIVRGFNDVLPLDSYKWQFLESKVKLILDRYNYSETRLPIVERSELFHRSVGESSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K  +  QD +G  ++LR + TA   R V EN   T     + +  GP+FR E+   GR+
Sbjct: 63  SKETYDFQDRNGDSLTLRPEGTAGCVRMVIENNLATRGQTQKLWYCGPMFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+  G      D E+  +     + +GI      + +    +   +  +    
Sbjct: 123 RQFYQLGVEAYGFDGIAIDLEVIAIAWSLFKELGISEY---VTLELNSLGSSLNRQEYTQ 179

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  +        D + +     +++L  +                      ++ F+ 
Sbjct: 180 ALLQYLKPYHAELDEDSIKRLDKNPLRILDSKIEKTQK---------ILANAPKLIDFID 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL     +  + +       K    L                       VRGL+YYTG 
Sbjct: 231 HDLRLRFKQTCQYLDALGVRYKLNENL-----------------------VRGLDYYTGL 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            K     ++  GGRYDGLV    GQ   A GF+IG+ RL++ L+ L
Sbjct: 268 VFEWTT--------DKLGSQSAICAGGRYDGLVDNLGGQKTAAIGFAIGMERLLLLLEDL 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKY 423
               N         I     DS  L +     + +R     ++ +M L    +F +Q K 
Sbjct: 320 GKLPNQDNACDVFFIL----DSAQLHQSLAIVENIRQELPQLKIDMDLKFG-SFKSQFKK 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           AD+    +AII G  E   G   IK L + +E                 Q  +  +EL++
Sbjct: 375 ADKSGAKVAIIIGQDELDNGFAGIKFLQQNEE-----------------QQQVAFNELIN 417

Query: 484 TVKK 487
            +++
Sbjct: 418 FLER 421


>gi|297741644|emb|CBI32776.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score =  215 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 113/442 (25%), Positives = 192/442 (43%), Gaps = 38/442 (8%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           +R+RN + +  R +  ++GF+ ++ P+LE      +   +E R    ++  +D   + ++
Sbjct: 1   MRLRNWLFNHFREVSRSFGFEEVDFPVLESEALFIRKAGEEIRD--QLYCFEDRGNRRVA 58

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           LR +LT  LAR V +   ++  P + + +G  +R E+   GR R+  Q ++D +G     
Sbjct: 59  LRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMDIIGVPEVM 118

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
           A+AE+   +    + VGI  +D    +++RK+L  +L    +      N    V   IDK
Sbjct: 119 AEAELISSIVTFFKRVGITASDVGFKVSSRKVLQEVLRCYSIPE----NLFGKVCVIIDK 174

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
           ++K  +  +   L                ++ E I  ++  LSI     + E+       
Sbjct: 175 MEKIPIDEITKELK------------SLGMSEEAIKDLLQVLSIKSLTKLEEIL------ 216

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            A  +   +L  +  L  K GY S  I+  +++VRGL YYTG V+E            + 
Sbjct: 217 GAAGEAVADLKQLFSLAEKFGY-SEWIQFDASVVRGLAYYTGIVFEGF---------DRE 266

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
               ++ GGGRYD L+S F G +VPA GF  G + +I  LK          +   V    
Sbjct: 267 GKLRAICGGGRYDRLLSTFGGDDVPACGFGFGDAVIIELLKEKGLLPELSLQ---VENIV 323

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
              D             LR  G   ++ L  SK      K A R N    I+ G  E  R
Sbjct: 324 CALDHYLQGAAAAVATRLREKGQSVDLVL-ESKPLKWVFKRAARTNAQRLILVGNSEWQR 382

Query: 443 GMLQIKDLAKGKELSREIKNNE 464
           GM+ +K L+ G++   ++   E
Sbjct: 383 GMVSVKILSSGEQYEIKLDELE 404


>gi|213155964|ref|YP_002318009.1| histidyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|301346483|ref|ZP_07227224.1| histidyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301594212|ref|ZP_07239220.1| histidyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|226737062|sp|B7I5G8|SYH_ACIB5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|213055124|gb|ACJ40026.1| histidyl-tRNA synthetase [Acinetobacter baumannii AB0057]
          Length = 430

 Score =  215 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 95/471 (20%), Positives = 167/471 (35%), Gaps = 62/471 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDVLPTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ M+ A   + +G+        +     + R      L     
Sbjct: 128 QFGVETFGVATPDIDAELIMLTARLWKRMGVDHMVQLELNTLGETDERTEYRNALVAFLN 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L+E        D   +     +++L  +  +              E    +  FL
Sbjct: 188 EHKDALDE--------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKLHDFL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +      +L + +                            +  I+  +VRGL+YY  
Sbjct: 231 KEESLSHFQQLQDYLTAA-----------------------GIKFVINQKLVRGLDYYNK 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 G+V  GGRYDGLV + KG+   +         +   L  
Sbjct: 268 TVFEWTTTA--------LGSQGTVCAGGRYDGLVGQLKGKADQSVPAVGFAMGMERLLLL 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKNFGNQ 420
           LE                   +    SK  +  + LR     A     +  GS  +  +Q
Sbjct: 320 LEQVEQAEIVRDCEAFLVA--EPAYQSKALVLAEQLRDQLEAANSNIRIKTGSQGSMKSQ 377

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           +K AD+     AII G  E     L +K+LA  ++    +     +   + 
Sbjct: 378 MKKADQAGAVYAIILGEREWEAQQLAVKELATAEQSQVALAELVPFLIEKF 428


>gi|169634404|ref|YP_001708140.1| histidyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|229558637|sp|B0VKR7|SYH_ACIBS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|169153196|emb|CAP02286.1| histidyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 430

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 96/471 (20%), Positives = 167/471 (35%), Gaps = 62/471 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDVLPTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ M+ A   + +G+        +     + R      L     
Sbjct: 128 QFGVETFGVATPDIDAELIMLTARLWKRMGVDHMVQLELNTLGETDERTEYRNALVAFLN 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L+E        D   +     +++L  +  +              E    +  FL
Sbjct: 188 EHKDALDE--------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKLHDFL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D      +L + +                            +  I+  +VRGL+YY  
Sbjct: 231 KEDSLSHFQQLQDYLTAA-----------------------GIKFVINQKLVRGLDYYNK 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 G+V  GGRYDGLV + KG+   +         +   L  
Sbjct: 268 TVFEWTTTA--------LGSQGTVCAGGRYDGLVGQLKGKADQSVPAVGFAMGMERLLLL 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKNFGNQ 420
           LE                   +    SK  +  + LR     A     +  GS  +  +Q
Sbjct: 320 LEQVEQAEIVRHCEAFLVA--EPAYQSKALVLAEQLRDQLEAANSNIRIKTGSQSSMKSQ 377

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           +K AD+     AII G  E     L +K+LA  ++    +     +   + 
Sbjct: 378 MKKADQAGAVYAIILGEREWEAQQLAVKELATAEQSQVALAELVPFLIEKF 428


>gi|156503280|ref|YP_001429345.1| histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|208780247|ref|ZP_03247589.1| histidyl-tRNA synthetase [Francisella novicida FTG]
 gi|254369907|ref|ZP_04985916.1| histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|254375028|ref|ZP_04990508.1| histidyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|290954354|ref|ZP_06558975.1| histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312218|ref|ZP_06803018.1| histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|166227967|sp|A7NEI6|SYH_FRATF RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|151572746|gb|EDN38400.1| histidyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|156253883|gb|ABU62389.1| histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|157122877|gb|EDO66994.1| histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|208743896|gb|EDZ90198.1| histidyl-tRNA synthetase [Francisella novicida FTG]
 gi|332678956|gb|AEE88085.1| Histidyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 421

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 103/484 (21%), Positives = 180/484 (37%), Gaps = 69/484 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           +  + RGF D    +      +   ++ I + Y +     P++E S+   + + +  D  
Sbjct: 3   KLTIVRGFNDVLPLDSYKWQFLESKVKLILDRYNYSETRLPIVERSELFHRSVGESSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K  +  QD +G  ++LR + TA   R V EN   T     + +  GP+FR E+   GR+
Sbjct: 63  SKETYDFQDRNGDSLTLRPEGTAGCVRMVIENNLATRGQTQKLWYCGPMFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+  G      D E+  +     + +GI      + +    +   +  +    
Sbjct: 123 RQFYQLGVEAYGFDGIAIDLEVIAIAWSLFKELGISEY---VTLELNSLGSSLNRQEYTQ 179

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  +        D + +     +++L  +                      ++ F+ 
Sbjct: 180 ALLQYLKPYHAELDEDSIKRLDKNPLRILDSKIEKTQK---------ILANAPKLIDFID 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL     +  + +       K    L                       VRGL+YYTG 
Sbjct: 231 HDLRLRFKQTCQYLDALGVRYKLNENL-----------------------VRGLDYYTGL 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            K     ++  GGRYDGLV    GQ   A GF+IG+ RL++ L+ L
Sbjct: 268 VFEWTT--------DKLGSQSAICAGGRYDGLVENLGGQKTAAIGFAIGMERLLLLLEDL 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKY 423
               N         I     DS  L +     + +R     ++ +M L    +F +Q K 
Sbjct: 320 GKLPNQDNACDVFFIL----DSAQLHQSLAIVENIRQELPQLKIDMDLKFG-SFKSQFKK 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           AD+    +AII G  E   G   IK L + +E                 Q  +  +EL++
Sbjct: 375 ADKSGAKVAIIIGQDELDNGFAGIKFLQQNEE-----------------QQQVAFNELIN 417

Query: 484 TVKK 487
            +++
Sbjct: 418 FLER 421


>gi|50083798|ref|YP_045308.1| histidyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81695938|sp|Q6FEM2|SYH_ACIAD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|49529774|emb|CAG67486.1| histidyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 430

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 94/472 (19%), Positives = 174/472 (36%), Gaps = 62/472 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDVLPTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGTPPESLTLRPEGTAGCVRAMLEHNLLRGATPRVWYVGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ +M A   + +G+        +    I+ R      L +   
Sbjct: 128 QFGVETFGVATPDIDAELILMTARLWKRMGVSEKVQLELNTLGEIDERAAYRTALVEFLT 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              + L+E        D   + G   +++L  +  +              E    +  FL
Sbjct: 188 QHKEALDE--------DSQRRLGTNPLRILDSKVESTQK---------ILENAPKLHDFL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D     ++L E +                        +      I+  +VRGL+YY  
Sbjct: 231 QEDSLAHFNQLQEYLT-----------------------HAGVSFVINQKLVRGLDYYNK 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 G+V  GGRYDGLV + KG+   +         +   L  
Sbjct: 268 TVFEWTTTA--------LGSQGTVCAGGRYDGLVGQLKGKADQSVPAVGFAMGMERLLLL 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSS--KNFGNQ 420
           LE            +      +S       +  + +R    G+ + + + +    +  +Q
Sbjct: 320 LEQVEQAEVVRDCDVFLVA--ESAFQGHALVLAEQIRDQFEGLASTIRVKTGSQGSMKSQ 377

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +K AD+     A+I G  E +   L +K+LA  ++    I     +   +  
Sbjct: 378 MKKADQSGAHYAVILGEREWTTQELTVKELATSEQSQVAISELVPFLVKKFE 429


>gi|229191426|ref|ZP_04318410.1| Histidyl-tRNA synthetase 1 [Bacillus cereus ATCC 10876]
 gi|228592001|gb|EEK49836.1| Histidyl-tRNA synthetase 1 [Bacillus cereus ATCC 10876]
          Length = 426

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 126/464 (27%), Positives = 215/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG   +ETP L   + +       D  
Sbjct: 2   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKSLETPTLNMYEVMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLEDQGKRELALRYDLTIPFAKVVAMN-QNIRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EITIQYNNRKLLNGILQAINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLKLTIADFKETF-NNQLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 280 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E+ +        V +  +   ++   +     Q LR+   ++ E+ L + +     L Y
Sbjct: 332 KETIS------STVDLFIIPLGTEL--QCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E++  + +  S+ 
Sbjct: 383 ANKENIPYVLIIGEEELSTETVMLRNMKEGSEVNVTLSSLSSYL 426


>gi|167627174|ref|YP_001677674.1| histidyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189082296|sp|B0TWR5|SYH_FRAP2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|167597175|gb|ABZ87173.1| Histidine--tRNA ligase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 424

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 102/494 (20%), Positives = 189/494 (38%), Gaps = 87/494 (17%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           +  + RGF D   +E      +   I++I + Y +D +  P+LE S+   + + +  D  
Sbjct: 3   KLTIIRGFNDILPQESCKWQFLESKIKSILDKYNYDEVRLPVLEKSELFHRSVGETSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K  +   D  G+ ++LR + TA   R V EN         + +  GP+FR E+   GR+
Sbjct: 63  SKETYDFVDRSGESLTLRPEGTAGCVRMVIENSLANRGQTQKLWYSGPMFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q  V+  G      D E+  +  +    +GI                     K L 
Sbjct: 123 RQFYQLGVEAYGYDNIAIDLEILTISWNLFRELGISECVKLELNSLGSSSNRQEYTKALL 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L+      D+            D + +     +++L  +                   
Sbjct: 183 EYLKPYHAQLDE------------DSIKRLDKNPLRILDSKNEQTQQ---------VLAN 221

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++ F+  D      +  E +                              +++  +V
Sbjct: 222 APKLIDFIDEDSLTRFEQTCEYLDNL-----------------------GVNYQVNQKLV 258

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY+G V+E +          +     +V  GGRYD L+    GQ   A GF+IG+ 
Sbjct: 259 RGLDYYSGLVFEWVT--------DRLGAQAAVCAGGRYDNLIESLGGQKAGAIGFAIGLE 310

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSS 414
           RL++ L+S         +     I     D++ L +  +  + +R     ++ +M L   
Sbjct: 311 RLLLLLESEGKLPIEDDKSDVFFIL----DNNQLHRSLLLVENVRQELPALKIDMDLKFG 366

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +F +Q K AD+ +  +A+I G  E  +  + +K L + K+                 Q 
Sbjct: 367 -SFKSQFKKADKSDAKIAVIIGQDELLQQAVGVKYLQQDKQ-----------------QE 408

Query: 475 TIPISELVSTVKKI 488
            IP+++L++ ++KI
Sbjct: 409 QIPLNKLINFLEKI 422


>gi|254169125|ref|ZP_04875962.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197621964|gb|EDY34542.1| histidyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 405

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 108/451 (23%), Positives = 194/451 (43%), Gaps = 49/451 (10%)

Query: 19  PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
             + +R R  + D I ++  ++GF  ++TP +E  D       +E    K  FS  D  G
Sbjct: 2   YPEYMRARRIVFDKICSVARSFGFHEVDTPSVELLDLFRIKSGEEIV--KQTFSFVDKGG 59

Query: 79  QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
           + I+L  +LT  ++R +A     +V P + +    ++R E+   GR R+F Q + D  G 
Sbjct: 60  REITLIPELTPSVSRMIAARK-DLVKPVKWFSFPKMWRYEEPQSGRLREFYQFNADIFGV 118

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
           +  TADAE+  +  + L+++G+K   Y +  ++R +++ +L  + +   ++        R
Sbjct: 119 ANITADAEVMALAMEILDSLGLK-GKYVMKFSDRILMEELLRSLDIEKIEEAF------R 171

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGD-FTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
            IDK DK   +     + +   + + D       L+     ++  F   +  + +  L +
Sbjct: 172 IIDKKDKIPEERFYEEMLKITREENVDSLISLLKLSGNVDTVLSKFEHFERSEILASLKD 231

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
           L+K    G+    +L +                     VRGL YYTG V+E         
Sbjct: 232 LLKAY--GKTATLDLSI---------------------VRGLAYYTGVVFEV-------- 260

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
                  F +V GGGRYD +V  F  Q  PA GF +G + L + ++      +   E+  
Sbjct: 261 -HDAKGEFRAVLGGGRYDRVVELFGAQPTPAVGFGMGDAVLELLMRREGVWPDERIEVDY 319

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
            +            +       LR +G   ++ L   ++ G QLKYA R N    II G 
Sbjct: 320 FIAIIPGF----RKEAIEIAMELRRSGYVVDIDLSE-RSIGKQLKYAHRINAKYTIIVGE 374

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            E   G + +KD+  G++ + +I+  +   E
Sbjct: 375 -EIKNGEVALKDMESGEQRNVKIEELKEVIE 404


>gi|296411104|ref|XP_002835275.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295628050|emb|CAZ79396.1| unnamed protein product [Tuber melanosporum]
          Length = 490

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 105/499 (21%), Positives = 194/499 (38%), Gaps = 63/499 (12%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           + IR++I  +I ++++ +G   I+TP+ E  + L     ++   +K ++ L D  G+  S
Sbjct: 1   MVIRDKIFSTITDVFKRHGAVTIDTPVFELREVLTGKYGED---SKLIYDLADQGGEICS 57

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPGRFRQFIQCDVDNVGSSA 140
           LRYDLT P AR++A N    +   + Y I  V+R ++     GR R+F QCD D  G+  
Sbjct: 58  LRYDLTVPFARWLAMN--PTIQSIKRYHIAKVYRRDQPAMTKGRMREFYQCDFDIAGTYD 115

Query: 141 ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
                   + +   +    +   +Y I IN+RKILDG+ +  G+  D    +   +  A+
Sbjct: 116 PMLPDAEILRITTEILD-NLDLGNYTIKINHRKILDGLFQVCGVPID----KIRSISSAV 170

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-- 258
           DKLDK   + V+  + E              L  E  D +  ++     + + +      
Sbjct: 171 DKLDKATWEDVRREMTEE-----------KELDPEVADRIGGYVQKKGGRELLDELLEDE 219

Query: 259 -VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF---- 313
            +    A   G  ++ ++ + +        ++    ++ RGL+YYTG +YE +       
Sbjct: 220 NLTSNEAFASGLKDMGLLFDYLEVLHVMP-KLSFDLSLARGLDYYTGIIYEVVTEASAPP 278

Query: 314 ----------------PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
                                    +  GS+  GGRYD LV  F                
Sbjct: 279 AGKSAKLRRAPKSDDPDADRSSDDSIGIGSIAAGGRYDELVGMFANSAKGRVPCVGISFG 338

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGS 413
           +       ++          V +  M          L +     ++L  AG++AE    +
Sbjct: 339 VDRIFSITKARMTGEVRGNEVEVYVMAFGGKGFTGLLKERMEVCRILWDAGVKAEFMYKN 398

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
                +Q   A++   P A++ G  E   G ++IK++                       
Sbjct: 399 KPKLPHQFAGAEKNGVPFAVVLGEDELKEGKVKIKEM------------GLPEGHPEKNG 446

Query: 474 ITIPISELVSTVKKILQEN 492
           + I +  LV+ ++K L + 
Sbjct: 447 VDINMDGLVAQIRKRLAKK 465


>gi|172087332|ref|XP_001913208.1| histidyl tRNA synthetase [Oikopleura dioica]
 gi|48994316|gb|AAT47890.1| histidyl tRNA synthetase [Oikopleura dioica]
          Length = 518

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 120/481 (24%), Positives = 203/481 (42%), Gaps = 34/481 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  +  +G  D    E+ IR  + D I+ +++ +G + I+TP+ E +D L     ++   
Sbjct: 56  LVLKNAKGTIDQGPAEMAIREELFDKIKAVFKTHGAETIDTPVFELTDILTNKYGED--- 112

Query: 67  NKGVFSLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GP 122
           +K ++++   +G  + +SLRYDLT P AR+VA+N    +   + Y I  V+R ++     
Sbjct: 113 SKLIYNVAKPEGSDESLSLRYDLTVPFARFVAQNK---IQSIKRYHIAKVYRRDQPYMTK 169

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+R+F QCD D  GS+      +   +   T     +    Y I +N+R+ILDGI    
Sbjct: 170 GRYREFYQCDFDIAGSNYAPMFPDAECVKIATEIIDSLDIGKYTIKLNDRRILDGIFAAC 229

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G       N        +DKLDK      +  +                L+ E  D +  
Sbjct: 230 GCPD----NLFRAACAEVDKLDKLPWTAPENEVSVRCG------MLKKGLSEECADKIGR 279

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           F+     + + +      ++    +  +G  E+ V+ E +       +++    ++ RGL
Sbjct: 280 FVQKSGAQELVKELLADPVLSANKSATEGLKEMSVLLEYLEAWNIM-DKVSFDLSLARGL 338

Query: 300 EYYTGCVYEAILGFPVMN----EKQKPVVFGSVGGGGRYDGLVSR----FKGQNVPATGF 351
           +YYTG +YE ++     +    E    V  GSV  GGRYDGLV          NVP  G 
Sbjct: 339 DYYTGVIYEIVMTPSEQDIKNAEAGTTVGVGSVAAGGRYDGLVGSLVGGKGKSNVPCVGI 398

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           S G+ RL   LK  +    +        +  M    + L         L  AGI AE   
Sbjct: 399 SFGVERLYTLLKRKK--EASSIRTTATQVFVMSGQKNMLKHRAAILNDLWEAGIPAETSY 456

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             +    N L+  + RN P  I+ G  E   G++ ++ +    E      +     + ++
Sbjct: 457 KPNPKLLNDLQSCESRNIPWGIVFGEREIEEGIVLLRSIISRDEEKVTRSDLVKVLKEKL 516

Query: 472 A 472
           A
Sbjct: 517 A 517


>gi|115315426|ref|YP_764149.1| histidyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|122324588|sp|Q0BK72|SYH_FRATO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|115130325|gb|ABI83512.1| histidine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
          Length = 421

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 103/484 (21%), Positives = 181/484 (37%), Gaps = 69/484 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           +  + RGF D    +      +   ++ I + Y +     P++E S+   + + +  D  
Sbjct: 3   KLTIVRGFNDVLPLDSYKWQFLESKVKLILDRYNYSETRLPIVERSELFHRSVGESSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K  +  QD +G  ++LR + TA   R V EN   T     + +  GP+FR E+   GR+
Sbjct: 63  SKETYDFQDRNGDSLTLRPEGTAGCVRMVIENNLATRGQTQKLWYCGPMFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+  G      D E+  +     + +GI      + +    +   +  +    
Sbjct: 123 RQFYQLGVEAYGFDGIAIDLEVIAIAWSLFKELGISEY---VTLELNSLGSSLNRQEYTQ 179

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  +        D + +     +++L  +                      ++ F+ 
Sbjct: 180 ALLQYLKPYHAELDEDSIKRLDKNPLRILDSKIEKTQK---------ILANAPKLIDFID 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL     +  + +       K    L                       VRGL+YYTG 
Sbjct: 231 HDLRLRFKQTCQYLDALGVRYKLNENL-----------------------VRGLDYYTGL 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            K     ++  GGRYDGLV    GQ + A GF+IG+ RL++ L+ L
Sbjct: 268 VFEWTT--------DKLGSQSAICAGGRYDGLVENLGGQKIAAIGFAIGMERLLLLLEDL 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKY 423
               N         I     DS  L +     + +R     ++ +M L    +F +Q K 
Sbjct: 320 GKLPNQDNACDVFFIL----DSAQLHQSLAIVENIRQELPQLKIDMDLKFG-SFKSQFKK 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           AD+    +AII G  E   G   IK L + +E                 Q  +  +EL++
Sbjct: 375 ADKSGAKVAIIIGQDELDNGFAGIKFLQQNEE-----------------QQQVAFNELIN 417

Query: 484 TVKK 487
            +++
Sbjct: 418 FLER 421


>gi|126695987|ref|YP_001090873.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166228592|sp|A3PBZ7|SYH_PROM0 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|126543030|gb|ABO17272.1| Histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 426

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 94/437 (21%), Positives = 166/437 (37%), Gaps = 52/437 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           RG  D    ++     +   +           I TP+LE ++   + + +  D  +K ++
Sbjct: 8   RGTVDLFPDQLIKWQNVERILLEQLSRASIKEIRTPILEMTELFIRGIGEGTDVVSKEMY 67

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           +  D   +  +LR + TA +AR + +N  +     + + +GP+FR E+   GR RQF Q 
Sbjct: 68  TFLDRGERSCTLRPEGTASVARALIQNGISSNPLQKLWYMGPMFRYERPQAGRQRQFHQL 127

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            V+ +G  +  +D E+  +  D L  +GIK  +  I            +K  L    K  
Sbjct: 128 GVEFIGHDSVRSDVEIIALAWDILSKLGIKELNLEINTLGDTNDRSNFQKSFL----KWL 183

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +       +D  ++     +++L  +                 E    + +FL       
Sbjct: 184 QANKDSLDLDSQNRISKNPLRILDSKNIQTKK---------VLENAPRLSNFL------- 227

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                     +      + EL    E++      +     +  +VRGL+YYT   +E   
Sbjct: 228 ----------SEKSHSRYLELKRQLEVL------NIPYVENFNLVRGLDYYTHTAFEIT- 270

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                          +V GGGRYD L+ +  G N PA GF+IG+ RLI+          N
Sbjct: 271 -------SGALGSQATVCGGGRYDDLIKQMGGPNTPAIGFAIGLERLILLAGKELEIPRN 323

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   I  ++    + S     ++ LR   +  E+ L S  +F  Q K A++     
Sbjct: 324 TD------IYIINKGLIAESFAMDLSRKLRNYDLLVELDL-SGASFSKQFKKANKLKSKS 376

Query: 432 AIIQGTGERSRGMLQIK 448
            I+ G  E   G   I+
Sbjct: 377 IIVIGDDEAVNGEFIIR 393


>gi|171733|gb|AAA34696.1| histidine-tRNA synthetase cytoplasmic [Saccharomyces cerevisiae]
          Length = 526

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 135/526 (25%), Positives = 228/526 (43%), Gaps = 71/526 (13%)

Query: 3   KKTKLR--AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           KK KL+   + P+G  D    ++ IR  I  ++  +++ +G   I+TP+ E  + L    
Sbjct: 27  KKGKLQVSLKTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKY 86

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K +++L+D  G+  SLRYDLT P ARYVA N    +   + Y I  V+R ++ 
Sbjct: 87  GED---SKLIYNLEDQGGELCSLRYDLTVPFARYVAMNN---IQSIKRYHIAKVYRRDQP 140

Query: 121 --GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
               GR R+F QCD D      +   D+E   ++ + L ++GIK  D+ I +N+RKILDG
Sbjct: 141 AMTKGRMREFYQCDFDVAGTFESMVPDSECLSILVEGLTSLGIK--DFKIKLNHRKILDG 198

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I +  G+  +D       +  A+DKLDK   + VK  + E               + E  
Sbjct: 199 IFQIAGVKDED----VRKISSAVDKLDKSPWEAVKKEMTEE-----------KGQSEETA 243

Query: 238 DIMVSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           D +  ++ ++       ++      +      ++G +++  + +       +S  I    
Sbjct: 244 DKIGEYVKLNGSLKEIHAVLSADANITSNEKAKQGLDDIATLMKYTEAFDIDS-FISFDL 302

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKP--------------VVFGSVGGGGRYDGLVS 339
           ++ RGL+YYTG +YE +       E                  V  GS+  GGRYD LV+
Sbjct: 303 SLARGLDYYTGLIYEVVTSASAPPENASELKKKAKSAEDASEFVGVGSIAAGGRYDNLVN 362

Query: 340 RFKG------QNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---S 389
            F          +P  G S G+ R+   +K    SST        V +       D    
Sbjct: 363 MFSEASGKKSTQIPCVGISFGVERIFSLIKQRINSSTTIKPTATQVFVMAFGGGKDWTGY 422

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L +    T+ L  AGI AE    +  N   Q     +  C +A+I G  E   G L++K 
Sbjct: 423 LPERMKVTKQLWDAGIEAEYVYKAKANPRKQFDTTKKAGCHIAVILGKEEYLEGKLRVKR 482

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           L  G+E + +                +  +++V  V++ L +  E+
Sbjct: 483 L--GQEFADDDGEL------------VSAADIVPIVQEKLSQIHED 514


>gi|118498220|ref|YP_899270.1| histidyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194324404|ref|ZP_03058177.1| histidyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|166227968|sp|A0Q8F1|SYH_FRATN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|118424126|gb|ABK90516.1| histidyl-tRNA synthetase [Francisella novicida U112]
 gi|194321469|gb|EDX18954.1| histidyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 421

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 103/484 (21%), Positives = 180/484 (37%), Gaps = 69/484 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           +  + RGF D    +      +   ++ I + Y +     P++E S+   + + +  D  
Sbjct: 3   KLTIVRGFNDVLPLDSYKWQFLESKVKLILDRYNYSETRLPIVERSELFHRSVGESSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K  +  QD +G  ++LR + TA   R V EN   T     + +  GP+FR E+   GR+
Sbjct: 63  SKETYDFQDRNGDSLTLRPEGTAGCVRMVIENNLATRGQTQKLWYCGPMFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+  G      D E+  +     + +GI      + +    +   +  +    
Sbjct: 123 RQFYQLGVEAYGFDGIAIDLEVIAIAWSLFKELGISEY---VTLELNSLGSSLNRQEYTQ 179

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  +        D + +     +++L  +                      ++ F+ 
Sbjct: 180 ALLQYLKPYHAELDEDSIKRLDKNPLRILDSKIEKTQK---------ILANAPKLMDFID 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL     +  + +       K    L                       VRGL+YYTG 
Sbjct: 231 HDLRLRFKQTCQYLDALGVRYKLNENL-----------------------VRGLDYYTGL 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            K     ++  GGRYDGLV    GQ   A GF+IG+ RL++ L+ L
Sbjct: 268 VFEWTT--------DKLGSQSAICAGGRYDGLVENLGGQKTAAIGFAIGMERLLLLLEDL 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKY 423
               N         I     DS  L +     + +R     ++ +M L    +F +Q K 
Sbjct: 320 GKLPNQDNACDVFFIL----DSAQLHQSLAIVENIRQELPQLKIDMDLKFG-SFKSQFKK 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           AD+    +AII G  E   G   IK L + +E                 Q  +  +EL++
Sbjct: 375 ADKSGAKVAIIIGQDELDNGFAGIKFLQQNEE-----------------QQQVAFNELIN 417

Query: 484 TVKK 487
            +++
Sbjct: 418 FLER 421


>gi|466828|gb|AAA17103.1| hisS [Mycobacterium leprae]
          Length = 427

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 95/471 (20%), Positives = 173/471 (36%), Gaps = 68/471 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  D    +      + D +       G+  IE P+ E +    + + +  D   K +
Sbjct: 13  PKGIPDYFPPDSAQFVAVRDGLLTAARRRGYGDIELPVFEDTALFARGVGESTDVVAKEM 72

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR RQ  
Sbjct: 73  YTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGALPVKLCYAGPFFRYERPQAGRCRQLQ 132

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEK 181
           Q  V+ +G      DAE+  +      ++G            D       RK+L   L +
Sbjct: 133 QVGVEAIGVDDPALDAEVITIADAGFRSLGLDGFQLEITSLGDGTCRPQYRKLLQEFLLQ 192

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + L  D +    L  LR +D                       D        +    +++
Sbjct: 193 LDLDEDTRRRAELNPLRVLD-----------------------DKRPQVQAMTAAAPVLL 229

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             LS   ++    +   +                               I+  +VRGL+Y
Sbjct: 230 DHLSDGAKQHFDTVLAHLDAL-----------------------RVPYVINPRMVRGLDY 266

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E +                 +GGGGRYDGL+ +  GQ++   GF +G+ R ++A
Sbjct: 267 YTKTTFEFVHPG--------LGAQSGIGGGGRYDGLMRQLGGQDLSGIGFGLGVDRTLLA 318

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L +   +           +  +     +  K  M    LR AG+R ++  G  +     +
Sbjct: 319 LHAEGKTVGETTRCD---VFGVSLGEAAKLKVAMLAGQLRAAGVRVDLIYG-DRGIRGAM 374

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + A R    +A+I          + ++DLA G+++S  + +  +   +R+A
Sbjct: 375 RAAGRSGARIALIVDDCAIKADGVGVRDLATGEQISVAVDSVVAEVISRIA 425


>gi|91070259|gb|ABE11178.1| histidyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HF10-11H7]
          Length = 426

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 93/437 (21%), Positives = 164/437 (37%), Gaps = 52/437 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           RG  D    ++     +   +           I TP+LE ++   + + +  D  +K ++
Sbjct: 8   RGTVDLFPDQLIKWQNVEKILLEQLSRASIKEIRTPILEMTELFIRGIGEGTDVVSKEMY 67

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           +  D   +  +LR + TA +AR + +N  +     + + +GP+FR E+   GR RQF Q 
Sbjct: 68  TFLDRGERSCTLRPEGTASVARALIQNGISSNPHQKLWYMGPMFRYERPQAGRQRQFHQL 127

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            V+ +G  +  +D E+  +  D L  +GIK  +  I            +K  L    K  
Sbjct: 128 GVEFIGHDSVRSDVEIIALAWDILGKLGIKELNLEINTLGDTNDRSNFQKSFL----KWL 183

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E       +D  ++     +++L  +                 E    + +FL       
Sbjct: 184 ETNKDSLDLDSQNRISKNPLRILDSKNIQTKK---------VLENAPRLFNFL------- 227

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                     +      + +L    E+++           +  +VRGL+YYT   +E   
Sbjct: 228 ----------SEKSHNRYLDLKRQLEVLK------IPYVENFNLVRGLDYYTHTAFEIT- 270

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                          +V GGGRYD L+ +  G N PA GF+I     +  L  L      
Sbjct: 271 -------SGALGSQATVCGGGRYDDLIKQMGGPNTPAIGFAI----GLERLILLAGKELE 319

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           I     + I      ++SL      ++ LR   +  E+ L S  +F  Q K A++     
Sbjct: 320 IPRNTDIYIINQGLVAESL--AMDLSRKLRNYDLLVELDL-SGASFSKQFKKANKLKSKS 376

Query: 432 AIIQGTGERSRGMLQIK 448
            I+ G  E   G   I+
Sbjct: 377 IIVIGDDEAVNGEFIIR 393


>gi|229156923|ref|ZP_04285004.1| Histidyl-tRNA synthetase 1 [Bacillus cereus ATCC 4342]
 gi|228626413|gb|EEK83159.1| Histidyl-tRNA synthetase 1 [Bacillus cereus ATCC 4342]
          Length = 428

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 126/464 (27%), Positives = 212/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 4   MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 64  LKEIYTLQDKGKRELALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 123 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQAINIPT 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 180 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 223

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 224 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 281

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++        N P  G S G+  +  AL  
Sbjct: 282 YEIFLKDGSITSS--------IGSGGRYDNIIGAFHGDNMNYPTVGISFGLDVIYTALSQ 333

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     +     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 334 KE----TVSSTADIFIIPLGTEI----QCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 384

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S     ++++ +G E+   + +  ++ 
Sbjct: 385 ANKENIPYVLIIGEEELSTETAMLRNMKEGSEVKVPLSSLSNYL 428


>gi|194246664|ref|YP_002004303.1| histidyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|254782340|sp|B3QZS0|SYH_PHYMT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|193807021|emb|CAP18457.1| Histidyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 423

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 106/485 (21%), Positives = 185/485 (38%), Gaps = 64/485 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P+G  D    EI     +   ++  +ENY +  I TP++EY++   +     D  
Sbjct: 1   MIIKKPKGTYDLLFDEISQWQELEKKVKFFFENYNYLEIRTPIIEYNEIFNRTATHSDMV 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRF 125
           NK +++  D  G+ I+LR + TA + R   EN           Y +G  FR E+   GR+
Sbjct: 61  NKEIYNFYDKKGRLIALRPEGTAGVVRSYIENKLDFNENLNKFYYLGSFFRYERPQKGRY 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+ +G +    D E+   +++ L  +G+K  D+ I IN         + I + 
Sbjct: 121 RQFHQIGVEVLGDNTPFLDLEVIATVSEMLIFLGLK--DFKIIINTLGDESSYKKYIKVF 178

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D    + + +       ++     +++L  +     +           + + ++  +L+
Sbjct: 179 NDYIKKQDIFLCSLC--KERLKKNSLRILDCKTCAQKNF---------LKSVPLITDYLN 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              ++    + + +K                       +     +I   +VRGL+YY   
Sbjct: 228 DFSKQRFDSVIKGLK-----------------------FMKINFQICPHLVRGLDYYNHT 264

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E IL    + ++          GGG YD LV    G      GF++G  RLI  LK  
Sbjct: 265 VFEIILNSDSIGKRNSLG------GGGCYDRLVEILGGHKTSGIGFALGTERLISVLKKY 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +    +      V    +  DS    K       LR AGI+ E+       F  QLK A 
Sbjct: 319 DLLEYSNNNQIDVYFLFL--DSKLFFKSLFLVNQLRNAGIKTEINYRFLP-FLKQLKKAL 375

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           + N    +I G  E     + IK+                       Q  +   E++  +
Sbjct: 376 KYNPKYFVILGEKEDKNNEISIKN------------------TINQNQKKLSQLEMIKFL 417

Query: 486 KKILQ 490
           KK L 
Sbjct: 418 KKELD 422


>gi|171185112|ref|YP_001794031.1| histidyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|229558737|sp|B1YCS2|SYH_THENV RecName: Full=Histidyl-tRNA synthetase
 gi|170934324|gb|ACB39585.1| histidyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 417

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 119/454 (26%), Positives = 206/454 (45%), Gaps = 46/454 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
             PRG  D    ++     + + +  + E++G+  +ETP++E+ + L K    E      
Sbjct: 10  RPPRGMRDWLPPQLYALIEMEERLSKVAESFGYRRVETPVVEHFEVLAKKAGQE--VVNE 67

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D  G+ + LR+D+T P+AR V      +  P R Y    VFR ++   GR+R+F 
Sbjct: 68  IYYFKDKAGRDVGLRFDMTVPVAR-VISYNLDLPRPVRWYYFTKVFRYDEPQHGRYREFH 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++ VGS++  ADAE+  +  + LEA G +  DY + IN+R+ +D +LE +G+     
Sbjct: 127 QFGIELVGSASPRADAEVIQVFIEALEAAGAR--DYVVKINDRRAVDKLLESLGV----- 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           L  R ++ RA+DK  K   + V             D      +  ++ + +         
Sbjct: 180 LQHRDVIYRALDKKYKLPREQV------------VDIMTNGGVPIDKAERIYD------A 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                L E V   +  + G             +    +R++   +IVRGL+YYTG V+EA
Sbjct: 222 SEEMTLEEAVDAVLRLDAGLGSFYQKLVGYLATAVPVDRLRFDMSIVRGLDYYTGVVFEA 281

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +G   +          +VGGGGRYD L+  + G  +PA GF+IG+ R    ++++    
Sbjct: 282 YVGKYRL----------AVGGGGRYDDLLELYSGVKMPALGFAIGVER---LMEAVGLER 328

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   + I     D  +        + LR AG    + LG  KN  +  +Y  +   
Sbjct: 329 VEKPLDYYIYIF----DDGAYPHAVALAKKLRAAGHSVAIELGE-KNLKDAFEYILKVGT 383

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              II G  E  RG+++I+DL + +E  + +   
Sbjct: 384 KYLIIMGRRELERGVVKIRDLQRREEFEKPLAEF 417


>gi|228940377|ref|ZP_04102948.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973294|ref|ZP_04133883.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228979857|ref|ZP_04140178.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis Bt407]
 gi|228779872|gb|EEM28118.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis Bt407]
 gi|228786490|gb|EEM34480.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228819503|gb|EEM65557.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326941014|gb|AEA16910.1| histidyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 425

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 127/455 (27%), Positives = 210/455 (46%), Gaps = 42/455 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLKDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+A++  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEADLMSMAFELFRTLNL---EVTIQYNNRKLLNGILESINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLTIADFKEAF-NNQLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           A++ N P  +I G  E S   + ++++ +G E+  
Sbjct: 382 ANKENIPYVLIIGEDELSTETVMLRNMKEGSEVKV 416


>gi|123968214|ref|YP_001009072.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166228596|sp|A2BQA4|SYH_PROMS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123198324|gb|ABM69965.1| Histidyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 426

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 93/437 (21%), Positives = 164/437 (37%), Gaps = 52/437 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           RG  D    ++     +   +           I TP+LE ++   + + +  D  +K ++
Sbjct: 8   RGTVDLFPDQLIKWQNVEKILLEQLSRASIKEIRTPILEMTELFIRGIGEGTDVVSKEMY 67

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           +  D   +  +LR + TA +AR + +N  +     + + +GP+FR E+   GR RQF Q 
Sbjct: 68  TFLDRGERSCTLRPEGTASVARALIQNGISSNPIQKLWYMGPMFRYERPQAGRQRQFHQL 127

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            V+ +G  +  +D E+  +  D L  +GIK  +  I            +K  L    K  
Sbjct: 128 GVEFIGHDSVRSDVEIIALAWDILRKLGIKELNLEINTLGDTNDRSNFQKSFL----KWL 183

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E       +D  ++     +++L  +                 E    + +FL       
Sbjct: 184 ETNKDSLDLDSQNRISKNPLRILDSKNIQTKK---------VLENAPRLFNFL------- 227

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                     +      + +L    E+++           +  +VRGL+YYT   +E   
Sbjct: 228 ----------SEKSHNRYLDLKRQLEVLK------IPYVENFNLVRGLDYYTHTAFEIT- 270

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                          +V GGGRYD L+ +  G N PA GF+I     +  L  L      
Sbjct: 271 -------SGALGSQATVCGGGRYDDLIKQMGGPNTPAIGFAI----GLERLILLAGKELE 319

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           I     + I      ++SL      ++ LR   +  E+ L S  +F  Q K A++     
Sbjct: 320 IPRNTDIYIINKGLVAESL--AMDLSRKLRNYDLLVELDL-SGASFSKQFKKANKLKSKS 376

Query: 432 AIIQGTGERSRGMLQIK 448
            I+ G  E   G   I+
Sbjct: 377 IIVIGEDEAVNGEFIIR 393


>gi|187729858|ref|YP_001789032.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|170676050|dbj|BAG14320.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
          Length = 428

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 94/444 (21%), Positives = 168/444 (37%), Gaps = 49/444 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
             +  +G  D    EI +  ++    R+ +  +G+  I TP+ E  +   + + D  D  
Sbjct: 5   NYQRLKGTVDILPGEIEVWQKVEKIARDTFNQFGYRGIRTPIFENYNVFARNVGDTSDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPG 123
            K ++   D  G+ ++LR + TA   R   EN         P + Y +GP+FR E+   G
Sbjct: 65  EKQMYDFDDRGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFRYERPQSG 124

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF Q   + + S +   D E+        + +GI      +     K       K  
Sbjct: 125 RQRQFTQIGCEALNSESPQIDVEVISEALQFFKQLGINDLKLTVNTLGDKETRDAYHKAL 184

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       ++L    + D  ++     +++L  +  TD                  ++  
Sbjct: 185 IDYLKPYYDQL----SDDSKERMYKNPLRVLDSKDETDQK---------IVANAPSILDS 231

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS    K   E+ +L+       +  +++                       VRGL+YYT
Sbjct: 232 LSDYSAKYFEEVKKLLDKLNIKYEIDSDM-----------------------VRGLDYYT 268

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             ++E +    V         + +V GGGRY+GL+S+  G +    G+ IG+ R ++ L 
Sbjct: 269 QTIFEIMSNSDVFG-----GGYVTVCGGGRYNGLISQLGGPDEGGIGYGIGVER-LLLLV 322

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E+     K    V   + D + D L         +R  G+ A+      K  G+Q+K 
Sbjct: 323 QKENPDFTPKYGPDVFFASADDEGDEL--AFEVLDKIRKNGVSADKNYQDVK-VGSQIKE 379

Query: 424 ADRRNCPLAIIQGTGERSRGMLQI 447
           A R       + G  E   G  ++
Sbjct: 380 AIRSKPRYYAVIGKKEVEEGKFEL 403


>gi|257066851|ref|YP_003153107.1| histidyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798731|gb|ACV29386.1| histidyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 428

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 126/461 (27%), Positives = 206/461 (44%), Gaps = 36/461 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDE 63
             ++     G  +   KE  + ++I   +   Y+ Y F PI+TP++E ++    K   + 
Sbjct: 2   NIVKPSTIAGVMELLPKEQLVFDKIKSIVEETYKKYQFMPIDTPVIEKNEILFAKGGGET 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
               K ++ +  D  + +SLR+DLT PLARYV+E+F  + FP + Y IG V+R E++  G
Sbjct: 62  ---EKQIYEIASDS-KDMSLRFDLTVPLARYVSEHFQDLNFPFKRYHIGRVYRGERNQKG 117

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F Q D+D +G ++ +   +  +          +  +D    INNRK+L+G  + +G
Sbjct: 118 RYREFYQADIDIIGHNSLSIYNDALLPRVIFEIFEKLNFSDLTFKINNRKLLNGFFKSLG 177

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +           VLR IDK DK G+      L     +              +   ++ F
Sbjct: 178 IED------TTDVLRTIDKKDKIGIDKTFDELVRITDEK-------------KARTIIEF 218

Query: 244 L-SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           + + D  K +              +G +EL  +   +   G     IKI   I RGL+YY
Sbjct: 219 IENKDSNKELLSKLFDFSTDELFLEGVDELNKVYTYMVDLGIPDRNIKIDLAITRGLDYY 278

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  VYE  +              GSV  GGRY+ L S F  Q +P  G SIG++RL    
Sbjct: 279 TSTVYETFINGYEK--------IGSVCSGGRYEDLASNFSKQKLPGVGMSIGLTRLFYQF 330

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L      IK +    I  +  D             LR +G   +++L S K F  ++ 
Sbjct: 331 QELGLIDEKIKSLTD--ILVIPMDESINEYGIEILNKLRDSGESVDIYLESGK-FKKKMN 387

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           YAD+      II G  E S+    IKD+  G++++++ +  
Sbjct: 388 YADKCGIRKVIILGEEEMSKREYSIKDMETGEQVTKKFEEL 428


>gi|149923099|ref|ZP_01911515.1| histidyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149816075|gb|EDM75587.1| histidyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 480

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 133/508 (26%), Positives = 222/508 (43%), Gaps = 69/508 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKF 59
           M K   +  + P G  D    ++  R  ++D +   YE +GF P+ETP +E   +L GK+
Sbjct: 1   MSK---ISTKPPSGMRDFLPADLVRRRAVIDVVVKAYEAHGFTPLETPAIENLSTLTGKY 57

Query: 60  LPDEDRPNKGVFSLQDD-------------DGQ-----WIS---LRYDLTAPLARYVAEN 98
             + D   + ++ L                +G+      ++   LRYDLT PLAR VA+ 
Sbjct: 58  GEEGD---QLMYRLLHRRDALRRPLEAAHAEGRPAREGELADQGLRYDLTVPLARVVAQY 114

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
              +    + Y+I PV+R ++ G GRFR+F QCDVD +G+ +  A+AE+C  +A  L  +
Sbjct: 115 GQ-LPRFFKRYQIQPVWRADRPGRGRFREFYQCDVDIIGTESLVAEAEVCSAVASALVEL 173

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
           G +   + + IN+R++L  ++   G+    +       L A+DKLDK G QGV   L   
Sbjct: 174 GFEA--FTVLINHRELLRAMIRAAGIDEALE----GTALVAVDKLDKVGKQGVLTELE-- 225

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG-----TIAGEKGFNELV 273
                        + +     ++  ++            L+          G+   +EL 
Sbjct: 226 ----------QRGIEAGSGAKLLDMITPPPGSGAVYNATLLSSLRERVDERGKAAIDELG 275

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
                +       + ++ + ++ RGL YYTG ++E  +          P    SVGGGGR
Sbjct: 276 T-LMGLCAYNPAGDHLEFAPSLARGLGYYTGPIFEIRV----------PDFPSSVGGGGR 324

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           YD LV  F  Q +PA GFS+G+ R ++ +K      + +     +++  MD D   +   
Sbjct: 325 YDNLVGMFGKQAIPAVGFSLGLER-LIVVKDERGDFDELAIGPDLMLCWMDVDGGRV--- 380

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN--CPLAIIQGTGERSRGMLQIKDLA 451
                 LR AG+  E++   +K    QL YAD          I G  E     L +K LA
Sbjct: 381 LELATKLRLAGLNVEVYPEKTKKLKKQLAYADAEGVKARFVGICGKQEIEDETLTVKHLA 440

Query: 452 KGKELSREIKNNESWREARVAQITIPIS 479
            G++++  +      R A      +  +
Sbjct: 441 SGEQVTLPVDAITPERLAAFVDQAVDQA 468


>gi|187931008|ref|YP_001890992.1| histidyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|229558668|sp|B2SEW9|SYH_FRATM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|187711917|gb|ACD30214.1| histidyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 421

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 103/484 (21%), Positives = 180/484 (37%), Gaps = 69/484 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           +  + RGF D    +      +   ++ I + Y +     P++E S+   + + +  D  
Sbjct: 3   KLTIVRGFNDVLPLDSYKWQLLESKVKLILDRYNYSETRLPIVERSELFHRSVGESSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K  +  QD +G  ++LR + TA   R V EN   T     + +  GP+FR E+   GR+
Sbjct: 63  SKETYDFQDRNGDSLTLRPEGTAGCVRMVIENNLATRGQTQKLWYCGPMFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+  G      D E+  +     + +GI      + +    +   +  +    
Sbjct: 123 RQFYQLGVEAYGFDGIAIDLEVIAIAWSLFKELGISEY---VTLELNSLGSSLNRQEYTQ 179

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  +        D + +     +++L  +                      ++ F+ 
Sbjct: 180 ALLQYLKPYHAELDEDSIKRLDKNPLRILDSKIEKTQK---------ILANAPKLIDFID 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL     +  + +       K    L                       VRGL+YYTG 
Sbjct: 231 HDLRLRFKQTCQYLDALGVRYKLNENL-----------------------VRGLDYYTGL 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            K     ++  GGRYDGLV    GQ   A GF+IG+ RL++ L+ L
Sbjct: 268 VFEWTT--------DKLGSQSAICAGGRYDGLVENLGGQKTAAIGFAIGMERLLLLLEDL 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKY 423
               N         I     DS  L +     + +R     ++ +M L    +F +Q K 
Sbjct: 320 GKLPNQDNACDVFFIL----DSAQLHQSLAIVENIRQELPQLKIDMDLKFG-SFKSQFKK 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           AD+    +AII G  E   G   IK L + +E                 Q  +  +EL++
Sbjct: 375 ADKSGAKVAIIIGQDELDNGFAGIKFLQQNEE-----------------QQQVAFNELIN 417

Query: 484 TVKK 487
            +++
Sbjct: 418 FLER 421


>gi|229174003|ref|ZP_04301539.1| Histidyl-tRNA synthetase 1 [Bacillus cereus MM3]
 gi|228609335|gb|EEK66621.1| Histidyl-tRNA synthetase 1 [Bacillus cereus MM3]
          Length = 425

 Score =  213 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 129/464 (27%), Positives = 217/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILESINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              +T E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GITEEMADTIYNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+++  +    T     G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLSINDFKDAF-NTPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L   ++           +G GGRYD ++   R    + P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGLITSS--------IGSGGRYDNIIGAFRGDNMSYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     +     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TVSSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S   + ++++ +G E+   + +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEELSTETVMLRNMKEGSEVKVPLSSLSNYL 425


>gi|300782829|ref|YP_003763120.1| histidyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299792343|gb|ADJ42718.1| histidyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 429

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 95/443 (21%), Positives = 179/443 (40%), Gaps = 41/443 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D    E+ +R ++   + ++ E  GF   + P+LE ++   +    E   +K +++
Sbjct: 11  KGTRDFLPAEMSVRTQVFGHLYDVLERRGFLRYDGPILESAEIYERKSGQE-LADKQLYT 69

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D  G+ ++LR ++T  +AR +A +  ++ FP R Y      R E    GR R+  Q +
Sbjct: 70  LTDKGGRRLALRPEMTPSVARMIAGSAKSLSFPVRWYSHPNCHRYEAPQRGRVREHWQIN 129

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
            D  GS +   + E+  ++ D + A+G   + + + +N+R +L   L  +     D L++
Sbjct: 130 ADIFGSDSANCEIEIFELVHDMMAALGATPDMFVLRVNDRNLLTSALTDVAGVSADHLSQ 189

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                             +     +   +   +      L+ +Q + +         +++
Sbjct: 190 VF---------------ALVDRWEKYPREKLAESAGEIGLSDKQFEKLA--------ETL 226

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                L+    A  +  + LV +           + +K    IVRGL YYT  V+E    
Sbjct: 227 DAGEALLDELPAEVRAESNLVRVLN-----SSAGSLVKYEPIIVRGLAYYTSTVFEVFDT 281

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                    P    ++ GGGRY  L S F  Q +P  GF +G   LI  L +   +    
Sbjct: 282 S--------PENRRALFGGGRYSDLASMFTPQQIPGIGFGMGDVTLIDFLDTHGLTPAPR 333

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
            E   V +  +    D     +     LR AG+R        +  G +L  AD+      
Sbjct: 334 SE---VDVMVIPVTEDLADAARSVAGSLRQAGLRTST-PIEHRKLGKELTRADKAGAVAV 389

Query: 433 IIQGTGERSRGMLQIKDLAKGKE 455
           +I G  + + G + ++ LA  ++
Sbjct: 390 VIVGQEDWAAGNVTVRSLATREQ 412


>gi|229075302|ref|ZP_04208295.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock4-18]
 gi|229116789|ref|ZP_04246173.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock1-3]
 gi|228666621|gb|EEL22079.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock1-3]
 gi|228707853|gb|EEL60033.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock4-18]
          Length = 428

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 127/458 (27%), Positives = 212/458 (46%), Gaps = 42/458 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D   K +++
Sbjct: 10  KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 69

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR+FIQCD
Sbjct: 70  LQDQGKRELALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 128

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  +     
Sbjct: 129 VDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQAINIPTE----L 181

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V+ ++DK++K G+ GV+  +             G  +T E  D + + +   L+ ++
Sbjct: 182 MSDVILSLDKIEKIGIDGVRKDIL------------GRGITEEMADTICNTVLSCLKLTI 229

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  E          G NEL  + + +   G N N I  +  + RGL  YTG VYE  L 
Sbjct: 230 ADFKEAF-NNQLVTDGINELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTVYEIFLK 287

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              +           +G GGRYD ++   R    N P  G S G+  +  AL   E    
Sbjct: 288 DGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQKE---- 335

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYADRRNC 429
              +     +  +   ++   +     Q LR+   ++ E+ L + +     L YA++ N 
Sbjct: 336 --TKSSTADLFIIPLGTEL--QCLQIAQQLRSTTSLKIELEL-AGRKLKRALNYANKENI 390

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           P  +I G  E S   + ++++ +G E+   + +  ++ 
Sbjct: 391 PYVLIIGEEELSAETVMLRNMKEGSEVKVPLASLSNYL 428


>gi|254373563|ref|ZP_04989050.1| hypothetical protein FTCG_01519 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571288|gb|EDN36942.1| hypothetical protein FTCG_01519 [Francisella novicida GA99-3549]
          Length = 421

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 102/482 (21%), Positives = 178/482 (36%), Gaps = 65/482 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           +  + RGF D    +      +   ++ I + Y +     P++E S+   + + +  D  
Sbjct: 3   KLTIVRGFNDVLPLDSYKWQFLESKVKLILDRYNYSETRLPIVERSELFHRSVGESSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K  +  QD +G  ++LR + TA   R V EN   T     + +  GP+FR E+   GR+
Sbjct: 63  SKETYDFQDRNGDSLTLRPEGTAGCVRMVIENNLATRGQTQKLWYCGPMFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+  G      D E+  +     + +GI      + +    +   +  +    
Sbjct: 123 RQFYQLGVEAYGFDGIAIDLEVIAIAWSLFKELGISEY---VTLELNSLGSSLNRQEYTQ 179

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  +        D + +     +++L  +                      ++ F+ 
Sbjct: 180 ALLQYLKPYHAELDEDSIKRLDKNPLRILDSKIEKTQK---------ILANAPKLIDFID 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL     +  + +       K    L                       VRGL+YYTG 
Sbjct: 231 HDLRLRFKQTCQYLDALGVRYKLNENL-----------------------VRGLDYYTGL 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            K     ++  GGRYD LV    GQ   A GF+IG+ RL++ L+ L
Sbjct: 268 VFEWTT--------DKLGSQSAICAGGRYDALVENLGGQKTAAIGFAIGMERLLLLLEDL 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               N         I        SL+  +   Q L    ++ +M L    +F +Q K AD
Sbjct: 320 GKLPNQDNTCDVFFILDSAELHQSLAIVENIRQELPQ--LKIDMDLKFG-SFKSQFKKAD 376

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           +    +AII G  E   G   IK L + +E                 Q  +  +EL++ +
Sbjct: 377 KSGAKVAIIIGQDELDNGFAGIKFLQQNEE-----------------QQQVAFNELINFL 419

Query: 486 KK 487
           ++
Sbjct: 420 ER 421


>gi|71065249|ref|YP_263976.1| histidyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|83305876|sp|Q4FTW6|SYH_PSYA2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71038234|gb|AAZ18542.1| histidyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 442

 Score =  213 bits (542), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 95/474 (20%), Positives = 173/474 (36%), Gaps = 72/474 (15%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  +GF D    +      +   + ++   YG++ I  P++E +D   + +    D   
Sbjct: 2   IKAIKGFNDILPAQSAKWLYLESILADVLGRYGYEHIRLPIVEQTDLFARAIGGATDIVE 61

Query: 68  KGVFSLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           K ++S  D       ++LR + TA   R V E+        + + IGP+FR E+   GR+
Sbjct: 62  KEMYSFTDKSDPPTPLTLRPEGTAGAVRAVNEHNLLRGDTPKLWYIGPMFRYERPQKGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKIG 183
           RQF Q  V++ GS+   ADAE+  M     + +G+K         +  R       E + 
Sbjct: 122 RQFHQLGVESFGSALPDADAELIAMTHLMWQELGLKDEMRLQLNSLGERDERHAYREALV 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  DK  +        D   +     +++L  +       + +  A L       + +F
Sbjct: 182 TYLTDKQEQLD-----EDSKRRLTTNPLRILDSK-------EASTQALLID--APKLANF 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  +      ++   +       +    L                       VRGL+YY 
Sbjct: 228 LGEESVAHFEQVQTYLTELGIDFEINPHL-----------------------VRGLDYYN 264

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF------------ 351
             V+E +          K     +V  GGRYDGLV + K  +                  
Sbjct: 265 KTVFEWVT--------DKLGSQATVCAGGRYDGLVGQLKSIDTRDAKADAKADAKADSKP 316

Query: 352 -----SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR--TAG 404
                ++G +  +  L  L  +   I ++    +  +    +  S    Y Q LR     
Sbjct: 317 VKSEPAVGFAMGLERLLLLIDAVAPIADIPACDVFVVA-HPEVYSAGIGYAQNLRYSRPD 375

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           +R +M   S+ +   Q+K AD+    L +I    E     + IKD+  G++ + 
Sbjct: 376 LRVKMA--SATSLKAQMKKADKSGAALTVIIAQQEIDDKTISIKDMQTGEQKTA 427


>gi|301054818|ref|YP_003793029.1| histidyl-tRNA synthetase 1 [Bacillus anthracis CI]
 gi|300376987|gb|ADK05891.1| histidyl-tRNA synthetase 1 [Bacillus cereus biovar anthracis str.
           CI]
          Length = 425

 Score =  213 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 130/464 (28%), Positives = 218/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRALALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E    ++  + G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLQLSIADFKEAFNNSLVAD-GVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++  F+G ++  P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALAQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S     ++++ +G E+   + +  ++ 
Sbjct: 382 ANKENIPYVLIIGEEELSTETAMLRNMKEGSEVKVLLSSLSNYL 425


>gi|187918014|ref|YP_001883577.1| histidyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|119860862|gb|AAX16657.1| histidyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 456

 Score =  213 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 132/479 (27%), Positives = 214/479 (44%), Gaps = 48/479 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +GF D   KE  IR  I+  I ++  +Y FD I+TP+LEYS+ L +    E   
Sbjct: 1   MDIRTLKGFRDYLPKEALIRTHIIKQIYSVLVSYNFDLIDTPILEYSEFLLRKGGHE--V 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+  + +S+R+DLT P AR++A N   I FP R  +IG VFR E    GR+R
Sbjct: 59  EKQIYRFKDNGDRDVSMRFDLTVPFARFMATNRSKIQFPFRRSQIGKVFRGENTQRGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA-----VGIKRNDYHIGINNRKILDGILEK 181
           +FIQ D D VG     +DAE+  ++   LE      +      + I  ++  IL+  ++K
Sbjct: 119 EFIQFDFDIVGEDTFRSDAEILSIVYCGLEEIFLNFIEGINRKFVIHFSHIGILNAYIDK 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +GL           +LR IDKLDK G++ V+  L              + L+ E +D+++
Sbjct: 179 LGLENK-----ATFILRNIDKLDKMGIESVRENL-------------LSQLSEEHVDLIL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+S++   +  +  +++K  +        +  I   +   G   +    +  IVRGL+Y
Sbjct: 221 GFISLEG--TFWDKLKVLKSILEDNDAVKRVEDIFVHLSALGI-QDAFNFNLKIVRGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLI 359
           YTG V+EA         +   +  GS+  GGRYD L+S F    Q V   G S GI R+ 
Sbjct: 278 YTGLVFEA---------EMMGINMGSICSGGRYDNLLSLFSNSLQKVSGVGGSFGIDRIQ 328

Query: 360 VALK-SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT------AGIRAEMFLG 412
             ++    +            +  ++ D      Y       R         I  E++  
Sbjct: 329 DIIEIEKFNYIKLFVVKASSRVLIVNIDDSLQDYYYKLADKFRRHDYSKINNIACEVYPK 388

Query: 413 S--SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           S   KN   Q++YA  +     I  G  E     L+++DL K +EL         + + 
Sbjct: 389 SKDGKNIKVQIEYALGKAIRFLIFVGQEEYRENKLKVRDLTKKEELLLSFDEAIKFIKG 447


>gi|11465814|ref|NP_053958.1| histidine-tRNA synthetase [Porphyra purpurea]
 gi|1711633|sp|P51348|SYH_PORPU RecName: Full=Histidyl-tRNA synthetase, chloroplastic; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|1276814|gb|AAC08234.1| histidine tRNA synthetase [Porphyra purpurea]
          Length = 430

 Score =  213 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 102/497 (20%), Positives = 189/497 (38%), Gaps = 83/497 (16%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    E      I + + ++ +   +  I+TP+ E SD   + + +  D  
Sbjct: 3   KIQAIRGTKDILPDEQLYWQFIHEKVASLLKYANYKEIKTPIFENSDLYDRGIGENTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRF 125
           NK ++   D   + I+LR + TA + R   EN         + +  GP+FR E+   GR 
Sbjct: 63  NKEMYRFNDRSNRDITLRPEGTAGVVRAFIENRMDVQNRLQKLWYSGPMFRYERPQSGRQ 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDG 177
           RQF Q  ++ +GSS   ADAE+  +  +    +                   + +  L  
Sbjct: 123 RQFHQLGIEFIGSSDARADAEIIHLAMNIFNDLSVNDLQLDINSIGKAEDRNHYQAKLQE 182

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE+     D             D  ++     +++L  + +   +              
Sbjct: 183 YLEQYYDDLD------------TDSQNRLSSNPIRILDTKNKYTQT---------ILNDS 221

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  FLS++ EK   ++ + +                          +   KI++ +VR
Sbjct: 222 PRISDFLSLESEKHFDDVCDYLT-----------------------LLNVPYKINTQLVR 258

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY    +E  +               ++ GGGRYD L+ +  G   PA G +IG+ R
Sbjct: 259 GLDYYNDTAFEIKILKSQ--------GQDTLCGGGRYDSLIHQLGGNKTPAVGCAIGLER 310

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L++  K      +       +    +     +     + TQ LR   ++ E+ + SS NF
Sbjct: 311 LLLVAKDNILLPHM-----SIDCYIVSKGIKARKIGIIITQFLRNQLVKTELDISSS-NF 364

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           G QLK A ++     +I G  E  +  + IK +   ++ +  I   ++            
Sbjct: 365 GKQLKQAHKKRAIACLILGDNEIQQETITIKWMYTQEQENMSIIEFKNK----------- 413

Query: 478 ISELVSTVKKILQENKE 494
               +S +KK +  NK+
Sbjct: 414 ----ISYLKKKIAFNKK 426


>gi|332656319|ref|YP_004301621.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|332656357|ref|YP_004301657.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|332656384|ref|YP_004306076.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|332656403|ref|YP_004306094.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|326324632|dbj|BAJ84459.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|326324662|dbj|BAJ84488.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|326324700|dbj|BAJ84524.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
 gi|326324719|dbj|BAJ84542.1| histidyl-tRNA synthetase [Tetragenococcus halophilus]
          Length = 428

 Score =  213 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 95/444 (21%), Positives = 169/444 (38%), Gaps = 49/444 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
             +  +G  D    EI +  ++    R+ +  +G+  I TP+ E  +   + + D  D  
Sbjct: 5   NYQRLKGTVDILPGEIEVWQKVEKIARDTFNQFGYRGIRTPIFENYNVFARNVGDTSDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPG 123
            K ++   D  G+ ++LR + TA   R   EN         P + Y +GP+FR E+   G
Sbjct: 65  EKQMYDFDDRGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFRYERPQSG 124

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF Q   + + S +   D E+        + +GI      +     K       K  
Sbjct: 125 RQRQFTQIGCEALNSESPQIDVEVISEALQFFKQLGINDLKLTVNTLGDKETRDAYHKAL 184

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       ++L    + D  ++     +++L  +  TD                  ++  
Sbjct: 185 IDYLKPYYDQL----SDDSKERMYKNPLRVLDSKDETDQK---------IVANAPSILDS 231

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS    K   E+ +L+       +  +++                       VRGL+YYT
Sbjct: 232 LSDYSAKYFEEVKKLLDKLNIKYEIDSDM-----------------------VRGLDYYT 268

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             ++E +    V         + +V GGGRY+GL+S+  G +    G+ IG+ R ++ L 
Sbjct: 269 QTIFEIMSDSDVFG-----GGYVTVCGGGRYNGLISQLGGPDEGGIGYGIGVER-LLLLV 322

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E+     K    V   + D + D L         +R  G+ A+      K  G+Q+K 
Sbjct: 323 QKENPDFTPKYGPDVFFASADDEGDEL--AFEVLDKIRKNGVSADKNYQDVK-VGSQIKE 379

Query: 424 ADRRNCPLAIIQGTGERSRGMLQI 447
           A RR      + G  E   G  ++
Sbjct: 380 AIRRKPRYYAVIGKKEVEEGKFEL 403


>gi|262280927|ref|ZP_06058710.1| histidyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257827|gb|EEY76562.1| histidyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 430

 Score =  213 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 94/471 (19%), Positives = 169/471 (35%), Gaps = 62/471 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDVLPTQTVAWRRLEQYLASLMDAYGYQQIRLPIIEQTGLFKRTIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGNPPESLTLRPEGTAGCVRAMLEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ ++ A   + +G+        +     + R      L     
Sbjct: 128 QFGVETFGVATPDIDAELILLTARLWKRMGVADKVQLELNTLGEADERTEYRNALVAFLN 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L+E        D   +     +++L  +  +              E    +  FL
Sbjct: 188 EHKDALDE--------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKLHDFL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D      +L + +                            +  I+  +VRGL+YY  
Sbjct: 231 KEDSLDHFKQLQDYLTAA-----------------------GIQFVINQKLVRGLDYYNK 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 G+V  GGRYDGLV + KG+   +         +   L  
Sbjct: 268 TVFEWTTTA--------LGSQGTVCAGGRYDGLVGQLKGKPDQSVPAVGFAMGMERLLLL 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKNFGNQ 420
           LE            +      +    +K  +  + LR     A     +  GS  +  +Q
Sbjct: 320 LEQVEQAEVIRDCEVFLVA--EPAYQTKALILAEQLRDQLEAANSSIRIKTGSQGSMKSQ 377

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           +K AD+     A+I G  E     L +K+LA  ++    I +   +   + 
Sbjct: 378 MKKADQAGALFALILGEREWDAQQLAVKELATAEQSQVAIADLVPFLIQKF 428


>gi|332656335|ref|YP_004301636.1| histidyl-tRNA synthetase [Tetragenococcus muriaticus]
 gi|326324678|dbj|BAJ84503.1| histidyl-tRNA synthetase [Tetragenococcus muriaticus]
          Length = 428

 Score =  213 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 95/444 (21%), Positives = 169/444 (38%), Gaps = 49/444 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
             +  +G  D    EI +  ++    R+ +  +G+  I TP+ E  +   + + D  D  
Sbjct: 5   NYQRLKGTVDILPGEIEVWQKVEKIARDTFNQFGYRGIRTPIFENYNVFARNVGDTSDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPG 123
            K ++   D  G+ ++LR + TA   R   EN         P + Y +GP+FR E+   G
Sbjct: 65  EKQMYDFDDRGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFRYERPQSG 124

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF Q   + + S +   D E+        + +GI      +     K       K  
Sbjct: 125 RQRQFTQIGCEALNSESPQIDVEVISEALQFFKQLGINDLKLTVNTLGDKETRDAYHKAL 184

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       ++L    + D  ++     +++L  +  TD                  ++  
Sbjct: 185 IDYLKPYYDQL----SDDSKERMYKNPLRVLDSKDETDQK---------IVANAPSILDS 231

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS    K   E+ +L+       +  +++                       VRGL+YYT
Sbjct: 232 LSDYSAKYFEEVKKLLDKLNIKYEIDSDM-----------------------VRGLDYYT 268

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             ++E +    V         + +V GGGRY+GL+S+  G +    G+ IG+ R ++ L 
Sbjct: 269 QTIFEIMSDSDVFG-----GGYVTVCGGGRYNGLISQLGGPDEGGIGYGIGVER-LLLLV 322

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E+     K    V   + D + D L         +R  G+ A+      K  G+Q+K 
Sbjct: 323 QKENPDFTPKYGPDVFFASADDEGDEL--AFEVLDKIRKNGVSADKNYQDVK-VGSQIKE 379

Query: 424 ADRRNCPLAIIQGTGERSRGMLQI 447
           A RR      + G  E   G  ++
Sbjct: 380 AIRRKTRYYAVIGKKEVEEGKFEL 403


>gi|318077865|ref|ZP_07985197.1| histidyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 405

 Score =  213 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 93/480 (19%), Positives = 176/480 (36%), Gaps = 87/480 (18%)

Query: 21  KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDDDGQ 79
            +      + ++I     + G+  IETP  E      + + +  D  +K ++      G 
Sbjct: 1   PDSGRFLAVREAIAAPLRDAGYGYIETPGFEDVRLFARGVGESTDIVSKEMYVFTTKGGD 60

Query: 80  WISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            ++LR + TA + R V E+            +  G  +R E+   GR+R F Q   + +G
Sbjct: 61  ELALRPEGTAAVLRAVLESNLHKTGNLPVKVWYSGSQYRYERPQKGRYRHFSQVGAEAIG 120

Query: 138 SSAETADAEMCMMMADTLEAVGIKR--------NDYHIGINNRKILDGILEKIGLHGDDK 189
           +     DAE+ ++      ++G+ R         D       R  L   L  + L  + +
Sbjct: 121 AEDPLLDAELIILADQAYRSLGLTRHRILLNSLGDATCRPVYRAALQDFLRALDLDEETR 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               +  LR +D         V+  L                       ++  +L    +
Sbjct: 181 RRVEINPLRVLDDKRP----EVRDQLT-------------------GAPLLADYLCDACK 217

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
               E+  L+ G                          R +    +VRGL+YYT   +E 
Sbjct: 218 AYHEEVRALLDGA-----------------------GVRYEDDPKLVRGLDYYTRTTFEF 254

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           +                +VGGGGRYDGL     G  +P+ G+++G+ R ++AL++     
Sbjct: 255 V--------HDGLGSQSAVGGGGRYDGLSEMLGGPELPSVGWALGVDRTVLALEAEGVVL 306

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +         +  +     +          LR AGI  ++  G  +     +K A+R   
Sbjct: 307 DLPP---VTSVYAIPLGEAARRALFEKVTELRRAGIATDLSFG-GRGLKGAMKSANRSGA 362

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
            LA+I G  +   G +Q+KDL  G++ +                  +P+++ V+ ++++L
Sbjct: 363 RLALIAGERDLVDGSVQLKDLESGEQHA------------------VPLAQAVAEIQRLL 404


>gi|297588365|ref|ZP_06947008.1| histidine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573738|gb|EFH92459.1| histidine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 431

 Score =  213 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 123/464 (26%), Positives = 206/464 (44%), Gaps = 36/464 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++     G  +   ++  + + I   I +++    F  I+TP +E  D L      E   
Sbjct: 2   IQPSTLPGMMELLPEDQMVFDTIKRRIEDVFIKNAFFSIDTPAIEKLDVLLSKGGGE--T 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K V+   D   +   LR+DLT PLA+YV+     + FP R Y+I  V+R E++  GR++
Sbjct: 60  SKQVYR-IDSSKKNQGLRFDLTVPLAKYVSMYMQDLAFPFRRYQIAKVYRGERNQKGRYK 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD+D +G+   +   +  ++         I   D+    NNRK+L+G    +G+  
Sbjct: 119 EFYQCDIDIIGNEKLSLYNDAEIVKCMYEALKSIDVPDFEFQFNNRKLLNGYFSDLGIE- 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR IDKLDK G+  VK  L +             NL  E+ID ++SFL I
Sbjct: 178 -----DFESCLRIIDKLDKIGIDNVKEELSKI------------NLDDEKIDSILSFLQI 220

Query: 247 DL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           D   ++ + +L  L         G  EL  + + +   G + + IKI+ +I RGL+YYTG
Sbjct: 221 DGPNQEIIEKLESLNIDNELFVCGLEELKFVYDDILSLGVSPDNIKINLSITRGLDYYTG 280

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 GS+  GGRYD L + F    +P  G SIG++RL   L+ 
Sbjct: 281 SVFETFFKEY--------REIGSICSGGRYDSLANNFTKSKLPGVGMSIGLTRLFYQLQE 332

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L            ++I    ++ +           LR++ +R   +L   K    +  YA
Sbjct: 333 LNLVKGQQTNFDCIIIPMKGYEKN----AVKLMNDLRSSSVRCMSYLEDDK-LKKKFNYA 387

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           D+ +    II G  E  +    ++++  G +   E+       +
Sbjct: 388 DKLSVKYVIIIGQDEVEQNKFTLRNMENGNQELLELNQIIEKLK 431


>gi|170290860|ref|YP_001737676.1| histidyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|229558689|sp|B1L6B4|SYH_KORCO RecName: Full=Histidyl-tRNA synthetase
 gi|170174940|gb|ACB07993.1| histidyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 428

 Score =  213 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 143/484 (29%), Positives = 228/484 (47%), Gaps = 63/484 (13%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +PRGF D P   + +R R+L  I  I+  YGFDPIETP LEY +++   L +E   NK 
Sbjct: 3   SIPRGFRDFPPPMMILRKRVLSKIEEIFRRYGFDPIETPSLEYWETVKGKLGEEAE-NKL 61

Query: 70  VFSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           +F   D    +W +LRY+LT PLARYVA +      P + Y IG V+R+E+   GR+R+F
Sbjct: 62  MFIFPDFFSKEWYTLRYELTFPLARYVAMH-PETPLPFKRYHIGNVWRHEEPQKGRYREF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +QCD D VGS    ADAE+  +  D +++      ++ + +N+R++L G+ E      + 
Sbjct: 121 LQCDADIVGSPYPEADAEVISVNIDAMKSFDF--ENFRVRLNDRRLLTGVFE-----EEL 173

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
            +N    + RAIDKLDK G+ GVK  L                     I  ++  +S   
Sbjct: 174 GINNPFPIYRAIDKLDKIGVDGVKGELAR------------LGAHESLIGRIMELISTRG 221

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
             +              +   + L  I  +V     + +R+    ++VRGL+YYTG V+E
Sbjct: 222 SFNEISNTFRRIENDKVKVALDHLEEIFSIV-----SDDRLVFDLSLVRGLDYYTGPVFE 276

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +  P           GS+ GGGRYD L+  + G++VPATG S+G+ RLI A   L   
Sbjct: 277 TSVSEP---------RIGSLAGGGRYDRLIGLYSGKDVPATGVSLGVERLIDAGLELGIF 327

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
             + +    V I ++    ++       +++LR  G    + L   ++   Q +YA++  
Sbjct: 328 DLSERSYTDVFIVSVRR--ENWRYAWRISRILRERGFSTSLDL-MRRSQSAQREYANKIG 384

Query: 429 CPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
             +    G  E     + +  +DL K                      T+ ISEL+ +++
Sbjct: 385 AKVIAFVGPSEEETETVTLYSRDLRK----------------------TVKISELIDSLR 422

Query: 487 KILQ 490
           + L 
Sbjct: 423 EFLS 426


>gi|88803357|ref|ZP_01118883.1| histidyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88780923|gb|EAR12102.1| histidyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 454

 Score =  213 bits (541), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 136/490 (27%), Positives = 224/490 (45%), Gaps = 64/490 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR 65
           ++  +P+G  D    E+  R+ I+++I+  +E +GF PIETP  E S +L GK+  + DR
Sbjct: 1   MKPSIPKGTRDFSPIEVANRSYIMNAIKMAFETFGFQPIETPSFENSATLMGKYGEEGDR 60

Query: 66  PNKGVFSLQDDDG-----QWI-----------------SLRYDLTAPLARYVAENFDTIV 103
               +F + +        + I                 +LRYDLT P ARYV ++ + I 
Sbjct: 61  L---IFKILNSGDYLAKAEEIVLSKKDSLKLTSQISEKALRYDLTVPFARYVVQHQNEIT 117

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
           FP + Y+I PV+R ++   GRFR+F+QCD D VGS +   + +   +       +G+   
Sbjct: 118 FPFKRYQIQPVWRADRPQRGRFREFVQCDADVVGSPSLWQEVDFIQLYDTVFTKLGLVG- 176

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
              I INNRKIL GI E IG          +    A+DKLDK G +GV   +        
Sbjct: 177 -TLIKINNRKILSGIAEVIGAQDK-----LIDFTVALDKLDKIGKEGVVTEML------- 223

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
                   +T+E I+ +           + +  L+ +++ +  G KG  EL  + + + +
Sbjct: 224 -----SKGITNEAIEKVQPLFDFSGSNSEKLSSLHSMLETSEEGIKGVEELRFVIDTIAQ 278

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            G  +  +++  T+ RGL YYTG ++E            K V  GS+GGGGRYD L   F
Sbjct: 279 LGLETASLEVDVTLARGLNYYTGAIFEV--------AAPKSVKMGSIGGGGRYDDLTGIF 330

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
             + V   G S G+ R+ + L+ L            V+    D  SD +       + LR
Sbjct: 331 GLKEVSGVGVSFGLDRIYLVLEELGLFKTVDLPTPKVIFLNFDATSDIMK--MKALKELR 388

Query: 402 TAGIRAEMFLG---SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
             G+++E++     S+K    Q KY   R     +     E S  M  +K++  G++ + 
Sbjct: 389 KQGVKSELYPDLGTSNKQQKRQWKYVASREIAFVV----SEISNDMYTLKNMGTGEQEAC 444

Query: 459 EIKNNESWRE 468
           +++      +
Sbjct: 445 DLRALIEKLK 454


>gi|307103704|gb|EFN51962.1| hypothetical protein CHLNCDRAFT_56349 [Chlorella variabilis]
          Length = 421

 Score =  213 bits (541), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 98/455 (21%), Positives = 192/455 (42%), Gaps = 38/455 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
              PRG  D   ++ R++N + D    +   YGF  I+ P+LE  +   +   +E    +
Sbjct: 4   LNPPRGTRDFFPEDKRLQNWLFDEFAAVSRLYGFQQIDFPVLESEELYVRKAGEE--ITE 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++ +D  G+ ++LR +LT  LAR   +    +  P + + IG  +R E+   GR R+ 
Sbjct: 62  QLYNFEDKGGRRVTLRPELTPSLARLALQKGKGLALPAKWFSIGQCWRYERATRGRRREH 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q ++D +G     A+AE+   +    + +G+   D  + +++RK+L  +L++ G+    
Sbjct: 122 YQWNMDVIGVPGVEAEAELLAAIVTFFQRLGLGAADVGLKVSSRKVLQAVLQRYGVAEAS 181

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                +                V   + +   D   +      + ++ ID ++  L++  
Sbjct: 182 FGPVCV----------------VVDKMEKIPRDKVVEELAKLGVAADAIDGILQALALSS 225

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +     L+ G          L      +  +   ++ +   +++VRGL YYTG V+E
Sbjct: 226 VEELEG---LLGGDNVAVADLRRLFE----LAAAYGYADWLVFDASVVRGLAYYTGMVFE 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                       +     ++ GGGRYD L+  F G++ P  GF  G + ++  LK  +  
Sbjct: 279 GF---------DRAGQLRAICGGGRYDRLLGTFGGEDQPCAGFGFGDAVIVELLKDRKLL 329

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                E   V    M  +    ++       LR AG R ++ L   K      K A+R +
Sbjct: 330 PQLRHE---VDDLVMAQEEGLRAEATALAARLRAAGRRVDLVL-EPKRIKWAFKQAERCS 385

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               ++    E + G +++KDLA  +E    ++  
Sbjct: 386 AARLVLVAPDEWANGTVRVKDLASRQERDVPVEEL 420


>gi|56707231|ref|YP_169127.1| histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669701|ref|YP_666258.1| histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134301266|ref|YP_001121234.1| histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|224456292|ref|ZP_03664765.1| histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254369916|ref|ZP_04985924.1| histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874070|ref|ZP_05246780.1| histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|81677144|sp|Q5NIL5|SYH_FRATT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123169691|sp|Q14K18|SYH_FRAT1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166227969|sp|A4IW12|SYH_FRATW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|54113637|gb|AAV29452.1| NT02FT1760 [synthetic construct]
 gi|56603723|emb|CAG44685.1| Histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320034|emb|CAL08068.1| Histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049043|gb|ABO46114.1| histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|151568162|gb|EDN33816.1| histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840069|gb|EET18505.1| histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158339|gb|ADA77730.1| histidyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 421

 Score =  213 bits (541), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 103/484 (21%), Positives = 180/484 (37%), Gaps = 69/484 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           +  + RGF D    +      +   ++ I + Y +     P++E S+   + + +  D  
Sbjct: 3   KLTIVRGFNDVLPLDSYKWQLLESKVKLILDRYNYSETRLPIVERSELFHRSVGESSDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K  +  QD +G  ++LR + TA   R V EN   T     + +  GP+FR E+   GR+
Sbjct: 63  SKETYDFQDRNGDSLTLRPEGTAGCVRMVIENNLATRGQTQKLWYCGPMFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+  G      D E+  +     + +GI      + +    +   +  +    
Sbjct: 123 RQFYQLGVEAYGFDGIAIDLEVIAIAWSLFKELGIYEY---VTLELNSLGSSLNRQEYTQ 179

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  +        D + +     +++L  +                      ++ F+ 
Sbjct: 180 ALLQYLKPYHAELDEDSIKRLDKNPLRILDSKIEKTQK---------ILANAPKLIDFID 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL     +  + +       K    L                       VRGL+YYTG 
Sbjct: 231 HDLRLRFKQTCQYLDALGVRYKLNENL-----------------------VRGLDYYTGL 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            K     ++  GGRYDGLV    GQ   A GF+IG+ RL++ L+ L
Sbjct: 268 VFEWTT--------DKLGSQSAICAGGRYDGLVENLGGQKTAAIGFAIGMERLLLLLEDL 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKY 423
               N         I     DS  L +     + +R     ++ +M L    +F +Q K 
Sbjct: 320 GKLPNQDNACDVFFIL----DSAQLHQSLAIVENIRQELPQLKIDMDLKFG-SFKSQFKK 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           AD+    +AII G  E   G   IK L + +E                 Q  +  +EL++
Sbjct: 375 ADKSGAKVAIIIGQDELDNGFAGIKFLQQNEE-----------------QQQVAFNELIN 417

Query: 484 TVKK 487
            +++
Sbjct: 418 FLER 421


>gi|116205856|ref|XP_001228737.1| hypothetical protein CHGG_02221 [Chaetomium globosum CBS 148.51]
 gi|88182818|gb|EAQ90286.1| hypothetical protein CHGG_02221 [Chaetomium globosum CBS 148.51]
          Length = 452

 Score =  213 bits (541), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 123/491 (25%), Positives = 198/491 (40%), Gaps = 63/491 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           MG K  L+   P+G  D    ++ +RN I  +I  + E +G  P++TP+ E    L +  
Sbjct: 1   MGSKGSLK--TPKGTRDWVGGDLLLRNHIFQTISTVLERHGGVPLDTPVFELRSILSEKY 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K ++ L D  G+  SLRYDLT P AR+++    T V   + Y+I  V+R ++ 
Sbjct: 59  GED---SKLIYDLADQGGEACSLRYDLTVPFARWLSMR--TDVQHIKRYQIAKVYRRDQP 113

Query: 121 --GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
               GR R+F QCD D  G           + +   +           + +N+RKILD +
Sbjct: 114 AISRGRLREFYQCDFDIAGVYGPMIPDAEVLCIIAEVFE--AFEIGVAVKLNHRKILDEL 171

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E  G+  D    +      A+DKLDK     V+  + E              L+ E  D
Sbjct: 172 FEIAGVPAD----KIRTTSSAVDKLDKAPWDEVRKEMLEN------------GLSEEVAD 215

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  ++      SM E+ E +       +                   + +    ++ RG
Sbjct: 216 RVGGYVQRKG--SMGEMLENLDLIPISPQAM--------------GVIDLVSFDLSLARG 259

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG +YE I+G    +        GS+  GGRYD LV  +  + +P  G S G+ R+
Sbjct: 260 LDYYTGLIYEVIVGDGASDRT----QVGSIAAGGRYDDLVGMYGRRPLPCVGISFGMDRI 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSS 414
              L +     ++    G V +  M          L +     + L  AGIRAE      
Sbjct: 316 FTILDARREKKSSSDLGGQVQVYIMAFGGKEFDGLLLERMRVARQLWAAGIRAEFAAKVK 375

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                Q         P+A+I G GE   G +++K L  G + +          E +    
Sbjct: 376 PKPLQQFNT--SEGVPVAVILGQGEVEAGRVRVKRLHVGDKAA----------EQKDKGQ 423

Query: 475 TIPISELVSTV 485
            +    LV  V
Sbjct: 424 LVAREGLVEEV 434


>gi|4103154|gb|AAD10242.1| histidyl-tRNA synthetase [Triticum aestivum]
          Length = 432

 Score =  213 bits (541), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 124/465 (26%), Positives = 205/465 (44%), Gaps = 41/465 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPNKGVFS 72
           G  D   +++ IR R    I ++++ +G   ++TP+ E  ++L GK+  D    +K V+ 
Sbjct: 1   GTRDFGREQMAIRERAFSIITSVFKMHGGVALDTPVFELRETLMGKYGED----SKLVYD 56

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+F QCD
Sbjct: 57  LADQGGELCSLRYDLTVPFARYVAMNN---ISAIKRYQIAKVYRRDNPSKGRYREFYQCD 113

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
            D  G           + +   L    +    Y I +N+RK+LDG+LE  G+  +    +
Sbjct: 114 FDIAGVYEPMEPDFEVVKVLTELLD-KLDIGVYEIKLNHRKLLDGMLEICGVPAE----K 168

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK-- 250
              V  +IDKLDK               +   +  +   +++E  + + S +        
Sbjct: 169 FRTVCSSIDKLDKLT-----------FEEVKKELVEEKGVSNETAENIGSLVKTKGPPLE 217

Query: 251 ---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
               + +               NEL ++ + + K     +RI    ++ RGL+YYTG +Y
Sbjct: 218 VLLELRKEGSKFMENEGSVVALNELEILFKALEK-ANALDRISFDLSLARGLDYYTGVIY 276

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           EA+               GS+  GGRYD LV  F  + VPA G S+GI R+   ++  E 
Sbjct: 277 EAVFKGVT--------QVGSIAAGGRYDKLVGMFSNKQVPAVGVSLGIERVFAIMEQQEK 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             N +       +       D +         L +AGI+AE  L +     N +KYA + 
Sbjct: 329 EKNQVIRATETEVLVSILGKDLILAA-ELVNELWSAGIKAEFKLTTR--VQNHIKYATQT 385

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             P  ++ G  E   G +++KD+   +E     K+     + R++
Sbjct: 386 GIPWMVLVGESELRDGKVKLKDIRANQEEEVPRKDFVEVLKQRLS 430


>gi|330508036|ref|YP_004384464.1| histidyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928844|gb|AEB68646.1| histidyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 453

 Score =  213 bits (541), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 97/468 (20%), Positives = 168/468 (35%), Gaps = 36/468 (7%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             + PRG  D   +E+R R++   +++ +   +G+  + TP  E+ +   +         
Sbjct: 3   IIKRPRGTRDFLPEEMRKRSQARKAMQEVLCRWGYQEVATPTFEHLELFTEKSGAS--VI 60

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++S QD  G+ ++LR +LTAP+ R           P R Y  G  FR E+   GRFR+
Sbjct: 61  DEIYSFQDKGGRDLALRPELTAPVMRMFVSELQNSPKPLRLYYFGNCFRYERPQKGRFRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI----- 182
           F Q   + +G +   ++AE   +    + + GI+ +   I +    ++  ILE+I     
Sbjct: 121 FWQLGAELIGGARPDSEAEAIALADQLIRSAGIRGD---IHLGYLGLIRAILERIEGDKR 177

Query: 183 ---GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ-ID 238
                  D K    L  L         GL  +  L G+   D + +      LT  Q   
Sbjct: 178 AAAMRMIDKKERSALKELLEDLDQGDLGLLELIDLKGKASLDKALEIAGDLLLTETQEAS 237

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             +       E  M                   L    E V   G      +I   IVRG
Sbjct: 238 TGIGGPKACSEPKMQSEGRGSARNGRAVSSQLHLEEFQETVDLLGAYGVDFQIDFEIVRG 297

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD-GLVSRFKGQNVPATGFSIGISR 357
           L+YY+G V+E           +       + GGG Y+   +   K  +    G       
Sbjct: 298 LDYYSGTVFEIY--------AEGLGAQRQICGGGTYELSSLFGGKETSSTGFGLGFDRIM 349

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
            I  +         +     V +                   LR + +   + +   ++ 
Sbjct: 350 EIAHIMEERKPPVFLVYTPDVKV-----------DAARIAVSLRRS-VPTVLDV-MGRSM 396

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           G QLK A       A+I G  E   G L ++D++ G++ +  ++    
Sbjct: 397 GAQLKAASGAGARHAVIVGREELDSGRLILRDMSGGEQENLTLEEIVE 444


>gi|255086409|ref|XP_002509171.1| predicted protein [Micromonas sp. RCC299]
 gi|226524449|gb|ACO70429.1| predicted protein [Micromonas sp. RCC299]
          Length = 415

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 105/447 (23%), Positives = 189/447 (42%), Gaps = 35/447 (7%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E   G  D   +E+R++  + D  RN+    GF+  + P+LE  +   +   +E    +
Sbjct: 3   LEPASGTRDFYPEEMRLQRWLYDHFRNVGTLCGFEEYDAPVLERQELYKRKAGEE--ITQ 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++S  D +G  ++LR ++T  LAR V     +++ P + Y +   +R E    GR R+ 
Sbjct: 61  QMYSFTDKEGVEVTLRPEMTPTLARMVLGKAQSLMLPLKWYSVPQCWRFETTQRGRKREH 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q ++D +G     A+ E+   +    + +GI   D  + +N+RK++  +L+ +G+  + 
Sbjct: 121 YQWNMDIIGCKGINAEVELLAAIVLFFKNIGITSKDIGLKVNSRKVMGAVLKSMGVTDE- 179

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              +   V   +DK DK G +  +  L + +            L ++    +V  L    
Sbjct: 180 ---QFAPVCVVMDKFDKIGPEETQKELRDTQ-----------GLDADTAKKLVDCLLCKS 225

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +      + G      G +EL  + EL    G+  + +   +++VRGL YYTG V+E
Sbjct: 226 VDDLAA----LCGEGVDRSGVDELKRLFELANDYGFG-DWLVFDASVVRGLAYYTGVVFE 280

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALKSLES 367
                       +     ++ GGGRYD L+S +   Q VPA GF  G   ++  LK    
Sbjct: 281 GF---------DRAGELRAICGGGRYDRLLSLYGAVQEVPACGFGFGDCVVVELLKDKGI 331

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             +  KE   V       +            ++R  G + ++ L   K       YA+R 
Sbjct: 332 LPDLPKE---VDFVVAAFNEGMQGSAMKTASLIREGGAQVDLLLEPKKKVTQTFDYANRV 388

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGK 454
                +     E   G ++IKDL  G+
Sbjct: 389 GARYMVFVAPSEWEAGKVRIKDLRLGE 415


>gi|332284653|ref|YP_004416564.1| histidyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330428606|gb|AEC19940.1| histidyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 429

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 106/489 (21%), Positives = 188/489 (38%), Gaps = 79/489 (16%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +     G  D           +  ++R     YG+  + TP+LE++    + + +  D  
Sbjct: 7   KVRALTGMKDILPDTSAEWETLEATVREWLAAYGYRNMRTPVLEHTRLFTRGIGEVTDIV 66

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  + + +++R + TA + R   E+      P R Y +GPVFR+EK   GR+
Sbjct: 67  EKEMYSFTDALNNEHLTMRPEFTAGMVRASIEHNMLYDRPHRVYAMGPVFRHEKPQRGRY 126

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDG 177
           RQF Q DV+ +G +    DAE+ +M+    + +G                   +R  L  
Sbjct: 127 RQFHQIDVEALGFAGPDIDAELIVMLGRLWKMLGLSDIRLELNSLGQAQERAAHRNALIE 186

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE+     D++   R+                +++L  +                    
Sbjct: 187 YLEQHHDVLDEEARRRMHT------------NPLRVLDTKNPAMQDMA---------NNA 225

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  FL  +       + + +K                             +++  +VR
Sbjct: 226 PRLFDFLGAESLAHFQGVCDRLKDA-----------------------GIEYRLNPRLVR 262

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +          +    G+V GGGRYDGL+    G+  PA GF+IG+ R
Sbjct: 263 GLDYYNLTVFEWVT--------DRLGAQGTVCGGGRYDGLIELLGGKPAPAVGFAIGVER 314

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L+       + +++        +  +   + +        + +R  G+R  +  GS+  F
Sbjct: 315 LLDLC----AQSSDALLSPECQVYVIHQGAAAQRLAAQLAEQMRDEGLRVIVHAGSAG-F 369

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            +Q K AD     LA+I G  E + G   IK L             ES  E +  Q T+P
Sbjct: 370 KSQFKRADASGAGLAVILGDDELASGSASIKWLR------------ESALEGQPQQETVP 417

Query: 478 ISELVSTVK 486
           +  L+  +K
Sbjct: 418 LDRLMKELK 426


>gi|126650631|ref|ZP_01722854.1| histidyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126592787|gb|EAZ86786.1| histidyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 436

 Score =  212 bits (540), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 127/467 (27%), Positives = 204/467 (43%), Gaps = 38/467 (8%)

Query: 1   MGKK------TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD 54
           M K        K+  +  RG  D   ++   R  I  ++ + +  YG  PIETP+L Y+ 
Sbjct: 1   MSKNEEAKVMKKMDYQNVRGTQDYLPEQEVARRAIRRTLEDTFMAYGCKPIETPILNYTK 60

Query: 55  SLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            +           + +++L D   + ++LRYDLT P A+ VA N  +I  P + Y IG V
Sbjct: 61  LMASKYAGGAEIVQEMYTLTDRGERDLALRYDLTIPFAKVVATN-PSITMPFKRYEIGKV 119

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           FR+     GRFR+F QCDVD VG +++ A+AE+ MM  D  + + +     +I  NNRKI
Sbjct: 120 FRDGPIKAGRFREFTQCDVDIVGVTSQAAEAELMMMAIDAFDKLNL---QINIQYNNRKI 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L G+L+      + +  +   V+  +DK++K   + +   L E              ++ 
Sbjct: 177 LVGLLQ----LFEVEQQQMNQVILILDKIEKIDQKTMLSELRE------------LGISE 220

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
             +  +  FL    + +M    E     I  ++G  ELV ++  +   G N  +   +  
Sbjct: 221 NSMTKIKQFLEGQPQINMAYFNEFANQNIILQQGIQELVELTAYLNALGLNE-KCTFNPF 279

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           + RGLE YTG +YE  L    +          S+G GGRYD  +    G    +      
Sbjct: 280 LARGLEIYTGTIYEIFLADGTIR--------SSIGSGGRYDQAIGGLLGSEEQSYATVGI 331

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              L V   +LE      K    V I  +   ++           LR    + E+ L S 
Sbjct: 332 SFGLDVIYTALEVIGRIEKNFPIVDIYIIPLGTE--KSALKLAAALRQHEYKVEVEL-SG 388

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           K     ++ A+R N P  I+ G  E ++ M +IK++  GKE     K
Sbjct: 389 KKVKKAMEKANRENTPKVIVLGEDEVTQNMYKIKNMQSGKEEVIAFK 435


>gi|228953605|ref|ZP_04115646.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229070776|ref|ZP_04204005.1| Histidyl-tRNA synthetase 1 [Bacillus cereus F65185]
 gi|228712355|gb|EEL64301.1| Histidyl-tRNA synthetase 1 [Bacillus cereus F65185]
 gi|228806030|gb|EEM52608.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 436

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 127/462 (27%), Positives = 212/462 (45%), Gaps = 42/462 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +  YG  P+ETP L   + +       D  
Sbjct: 1   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFGRYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + I+LRYDLT P A+ VA N   +  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDIALRYDLTIPFAKVVAMN-PNLRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EISIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTNDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLTIVDFKEAF-NNQLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDSMNYPTVGISFGLDVIYAALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++ N P  +I G  E S   + ++++ +G E+   + + ++
Sbjct: 382 ANKENIPYVLIIGEEELSTNTVVLRNMKEGSEMKVPLTSLKN 423


>gi|328950735|ref|YP_004368070.1| Histidyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451059|gb|AEB11960.1| Histidyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 420

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 186/468 (39%), Gaps = 59/468 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
               +G  D    ++     I+D+ R + E+ G   I+TP+ E +    K +    D   
Sbjct: 2   IRAVKGTYDLYGSKLHAHRYIIDTARKVLESAGALEIQTPVFEETRVFEKGVGASTDIVR 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++S  D  G+ ++LR + TA + R   E+       P + +  GP+FR E    GR R
Sbjct: 62  KEMYSFTDRGGRHLTLRPEGTAGIVRAYLEHGMKVWPSPVKLWMAGPMFRAENVQRGRQR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND----YHIGINNRKILDGILEKI 182
           QF Q D + +G      DAE   +M + L A+G+   +          +R+  +  L ++
Sbjct: 122 QFHQVDFEALGLEDPIVDAEAIALMVEVLRALGLTGLEVKLGSVGDPEDRERYNAYLREV 181

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                 +L+E        D  ++  L  ++++  +   D   +  + A +       M+ 
Sbjct: 182 LEPYRSELSE--------DSQERLELNPMRIVDSKSAQD--QEVLRRAGVRP-----MLE 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL                    GE        +   + + G       +  TIVRGL+YY
Sbjct: 227 FL--------------------GEAARAHFEAVKRHLDRLGVP---YTVDPTIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E            +     ++GGGGRYDGL     G  VP  G++ G+ R+ +AL
Sbjct: 264 VRTAFEI--------HHARIGAQSALGGGGRYDGLSELLGGPRVPGVGWAFGVERIALAL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR-TAGIRAEMFLGSSKNFGNQL 421
           +    +           +  +  D  ++++       LR  A  R E    + +     +
Sbjct: 316 EEEGLTP---PRPSGPDLYLVPLDEAAVAEALELATRLRPQA--RVEFAY-APRRVTKGI 369

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K A++R      + G GER+RG++ +KDLA G ++        S    
Sbjct: 370 KEAEKRGARFVGLIGEGERARGVVAVKDLASGVQVEVPPSEVLSVIRG 417


>gi|317051009|ref|YP_004112125.1| histidyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946093|gb|ADU65569.1| histidyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 418

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 92/471 (19%), Positives = 169/471 (35%), Gaps = 63/471 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K     +  RGF D  +   R  ++    ++ I EN+ +  I  P++E ++   + +
Sbjct: 1   MSEKQ---IKAIRGFNDLLSPMARRWSQAEQILQEILENWRYQEIRLPIMEKTELFCRGI 57

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNE 118
            +  D   K +++  D   + ++LR + TA + R   EN       P R +  GP+FR E
Sbjct: 58  GENTDIVGKEMYTFADKSDESVTLRPEGTAGVVRAYVENKLYNELAPQRVWYRGPMFRYE 117

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  V+  G +  T DAE   +    L  +GI        +       R 
Sbjct: 118 RPQKGRYRQFHQLGVEVFGETEATIDAETIALGYTMLVELGIAAGVTIEINNIGCPQCRP 177

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L        + L E               ++   L + + +          A   
Sbjct: 178 GYRQALVAFLNARREHLCENC----------VERIEKNPLRVLDCKNPECQAQVASAPTI 227

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            E                              E        +   +   G      + + 
Sbjct: 228 DEH---------------------------RCESCAAHYGALQIYLDAYGVP---YQRNP 257

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY G  +E                  ++GGGGRYDGLV    G    A GF+ 
Sbjct: 258 FMVRGLDYYVGTAFEFTTSL--------LGSQNAIGGGGRYDGLVEDLGGPATAAVGFAF 309

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+ R+++ ++      ++++    +       ++    +     + LR+ G  +E+    
Sbjct: 310 GMERVMLLVE----HFDSLQADLSLDFYIGYTENTFTLQGLQALRALRSLGKTSELD-TR 364

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            ++  N  K  DR      ++ G  E +     +K+LA G++    +    
Sbjct: 365 QRSVKNIFKRGDRLGARHVVLIGGDEAAGNFFTVKELATGEQRQVPLAELA 415


>gi|221501928|gb|EEE27679.1| histidyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 498

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 116/505 (22%), Positives = 198/505 (39%), Gaps = 63/505 (12%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           + +R  +L S+R ++  +G   I+TP+ E  ++L     +     K V+ L+D  G+ +S
Sbjct: 1   MAVRELVLGSVREVFRRHGGVEIDTPVFELRETLLGKYGEN---QKLVYDLKDQGGEQLS 57

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR----QFIQCDVDNVGS 138
           LRYDLT P ARYVA +    +   R + IG V+R ++    R R         D+  V  
Sbjct: 58  LRYDLTVPFARYVASH---DIEKIRRFHIGKVYRRDEPQMNRGRFREFYQCDFDIAGVSP 114

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
                DAE   +M + L  +      +H+  N+R +LDG++E  GL  D    +      
Sbjct: 115 VKMVPDAEAVCIMVEALRTLQGMVGKFHVKTNHRVLLDGMMEVCGLPAD----KFTTACS 170

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE----KSMHE 254
           +IDKLDK     V+  L +              + ++  D +   + +        +   
Sbjct: 171 SIDKLDKEPWAAVRRELVD-----------TKGVAADVADRLGELVQMRGTFSQIIADLS 219

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
                           E+ + S+ +   G  ++      ++ RGL+YY+G ++EA+L   
Sbjct: 220 KKPDFASNEKVALALQEMEIFSQYIEAMGVQTDEAIFDLSLARGLDYYSGVIFEAVLV-- 277

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST----- 369
                      GSVGGGGRYD LV  F G++VPA G S+G+ RL   ++           
Sbjct: 278 ----GTDGAAVGSVGGGGRYDKLVGMFSGRDVPAVGMSVGVERLFRMVEKSLGMAAAPTA 333

Query: 370 ---------------------NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
                                 ++       +       + L         L   GI AE
Sbjct: 334 EEDEHAGDKKKKKKEKATQEVPSLVRESFTDVLVCSVGDNMLKACMSVAGSLWRNGIAAE 393

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            F G+      Q+  A +R  PL +I G  E  R   +++ L        +  +      
Sbjct: 394 FFYGAGAKLKKQMDMACQRRIPLLVILGEEELKRNTAKVRQLWYDD--DVKRPDTNGEGS 451

Query: 469 ARVAQITIPISELVSTVKKILQENK 493
           A   +  + + +L   +K    ++ 
Sbjct: 452 AGEKEEEVSLDQLPQVIKAYFCQHG 476


>gi|225865301|ref|YP_002750679.1| histidyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|225787996|gb|ACO28213.1| histidine--tRNA ligase [Bacillus cereus 03BB102]
          Length = 425

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 129/455 (28%), Positives = 211/455 (46%), Gaps = 42/455 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP+L   + +       D  
Sbjct: 1   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPMLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLRDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILESINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 ER----TSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  +    T    +G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLKLSIDDFKDAF-NTPLVAEGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNINYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADIFIIPIGTE----LQGLQIAQQLRSTTSLKVELEL-TGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           A++ N P  +I G  E S     ++++ +G E+  
Sbjct: 382 ANKENIPYVLIIGEEELSTETAMLRNMKEGSEVKV 416


>gi|229103854|ref|ZP_04234533.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock3-28]
 gi|228679557|gb|EEL33755.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock3-28]
          Length = 428

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 129/458 (28%), Positives = 212/458 (46%), Gaps = 42/458 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D   K +++
Sbjct: 10  KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 69

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR+FIQCD
Sbjct: 70  LQDQGKRELALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 128

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  +     
Sbjct: 129 VDIVGVESVMAEAELMSMAFELSRTLNL---EVTIQYNNRKLLNGILQAINIPTE----L 181

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V+ ++DK++K G+ GV+                G  +T E  D + + +   L+ ++
Sbjct: 182 MSDVILSLDKIEKIGIDGVRK------------DVLGRGITEEMADTICNTVLSCLKLTI 229

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  E     +    G NEL  + + +   G N N I  +  + RGL  YTG VYE  L 
Sbjct: 230 ADFKEAF-NNLLVTDGINELQQLQQCLIALGINENAI-FNPFLARGLTMYTGTVYEIFLK 287

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              +           +G GGRYD ++   R    N P  G S G+  +  AL   E    
Sbjct: 288 DGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQKE---- 335

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYADRRNC 429
            I     + I  +  +     +     Q LR+   ++ E+ L + +     L YA++ N 
Sbjct: 336 TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNYANKENI 390

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           P  +I G  E S   + ++++ +G E+   + +  ++ 
Sbjct: 391 PYVLIIGEEELSAETVVMRNMKEGSEVKVPLSSLSNYL 428


>gi|229080541|ref|ZP_04213062.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock4-2]
 gi|228702843|gb|EEL55308.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock4-2]
          Length = 436

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 128/462 (27%), Positives = 213/462 (46%), Gaps = 42/462 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 1   MEMRNVKGTKDYLPEEQVLRNKIKRACGDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + I+LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDIALRYDLTIPFAKVVAMN-QNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EISIQYNNRKLLNGILQAINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 E----LTNDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG +
Sbjct: 221 CLKLTIVDFKEAF-NNQLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTI 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     + I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 331 KE----TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 381

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A++ N P  +I G  E S   + ++++ +G E+   + + ++
Sbjct: 382 ANKENIPYVLIIGEEELSTNTVVLRNMKEGSEMKVPLSSLKN 423


>gi|78779008|ref|YP_397120.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123755104|sp|Q31BR1|SYH_PROM9 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|78712507|gb|ABB49684.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 426

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 91/438 (20%), Positives = 162/438 (36%), Gaps = 54/438 (12%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           RG  D    ++     +   +           I TP+LE ++   + + +  D  +K ++
Sbjct: 8   RGTVDLLPDQLIKWQNVEKIVLEQLARASIKEIRTPILEMTELFIRGIGEGTDVVSKEMY 67

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           +  D   +  +LR + TA +AR + +N  +     + + +GP+FR E+   GR RQF Q 
Sbjct: 68  TFLDRGERSCTLRPEGTASVARALIQNGISSNPFQKLWYMGPMFRYERPQAGRQRQFHQL 127

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            V+ +G  +  +D E+  +  D L  +GIK  +  I       L  I +++         
Sbjct: 128 GVEFIGYESVRSDVEIIALAWDILGKLGIKELNLEINS-----LGDIDDRLNFQKSFLKW 182

Query: 192 ERLIVLRAI-DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                     D  ++     +++L  +                 E   I+ +FLS    K
Sbjct: 183 LEKNKDSLDLDSQNRINKNPLRILDSKNMQTKK---------ALENAPILFNFLSEKSHK 233

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              +L + +                                +  +VRGL+YYT   +E  
Sbjct: 234 RYSDLKKQL-----------------------NVLQIPYVENFNLVRGLDYYTHTAFEIT 270

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                           +V GGGRYD L+ +  G N PA GF+I     +  L  L     
Sbjct: 271 --------SCALGSQATVCGGGRYDNLIKQMGGPNTPAIGFAI----GLERLILLAGKDL 318

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
            +     + I      ++SL      ++ LR   +  E+ L S  +F  Q K A++    
Sbjct: 319 EVPRNTDIYIINQGLIAESL--AMDLSRKLRNYDLLVELDL-SGASFSKQFKKANKLKSK 375

Query: 431 LAIIQGTGERSRGMLQIK 448
             I+ G  E +     I+
Sbjct: 376 SIIVIGDDEAANKEFIIR 393


>gi|206974667|ref|ZP_03235583.1| histidyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|206747310|gb|EDZ58701.1| histidyl-tRNA synthetase [Bacillus cereus H3081.97]
          Length = 426

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 128/464 (27%), Positives = 213/464 (45%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              +T E  D + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GITEEMADTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    + P  G S G+  +  AL  
Sbjct: 280 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMHYPTVGISFGLDVIYTALSQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     +     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 332 KE----TVSSTADVFIIPLRTEI----QCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 382

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E S     ++++ +G E+   + +  ++ 
Sbjct: 383 ANKENIPYVLIIGEEELSTETAMLRNMKEGSEVKVPLSSLSNYL 426


>gi|195942375|ref|ZP_03087757.1| histidyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 455

 Score =  212 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 119/471 (25%), Positives = 197/471 (41%), Gaps = 47/471 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I ++  +Y FD I+TP+LEYSD L K     D  
Sbjct: 1   MDIKTLKGFKDYLPKDSLIRIHIVRQIFSVLNSYNFDLIDTPVLEYSDLLLKKSG--DET 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+ G+ +S+R+DLT P AR+VA N   +  P R  + G VFR E    GR+R
Sbjct: 59  EKQIYRFKDNGGRDVSMRFDLTVPFARFVATNISALKLPFRRSQFGKVFRGENSQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMA----DTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           +F+Q D D VG     A       +       L  +      + I  ++  IL+   EK+
Sbjct: 119 EFMQFDFDIVGEDTFRAMPRSFCCIYGLEEIFLNFIEGINKKFIIHYSHIGILNSFFEKL 178

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           GL         + +LR IDK+DK G+  VK  L                +  E +D ++S
Sbjct: 179 GLKEKS-----IFILRNIDKIDKIGIDKVKEAL-------------LLEIEKEAVDSILS 220

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            +S+  + +  +  + +K  +   +    +  + + +       +   ++  I RGL+YY
Sbjct: 221 LVSL--QGTFKDKIQALKSILGDNESIKRVEDVFQHLSLLKI-QDSFNLNLKISRGLDYY 277

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI--- 359
           TG V+E+ +              GSV  GGRYD LVS F       +G            
Sbjct: 278 TGIVFESEVFGS---------NMGSVCSGGRYDNLVSSFSNSIQKISGVGGSFGVDRIKD 328

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL-- 411
           +      S            +  ++ DS   + Y       R         I  E++   
Sbjct: 329 IIDLEKFSYIKIFVTKARSKVLIVNLDSALQNYYYELATRFRNHDYSKVKNISCEVYFKN 388

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            + KN   Q++YA  +     +  G  E     ++++DL K +EL    + 
Sbjct: 389 KNGKNIKEQIEYALSKEIRFLVFVGQEEYKENKMKVRDLTKKEELLLSFEE 439


>gi|321253125|ref|XP_003192637.1| histidine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317459106|gb|ADV20850.1| histidine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 586

 Score =  212 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 123/536 (22%), Positives = 211/536 (39%), Gaps = 85/536 (15%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
             L  + P+G  D   +   +R +I  ++ +I+  +    I+TP+ E  + L     ++ 
Sbjct: 86  NLLSLKTPKGTLDHKPEAALLRKKIFSTLESIFLKHDASTIDTPVFELKEILAGKYGED- 144

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GP 122
             +K ++ L D  G+  SLRYDLT P ARYVA N    +   R Y IG V+R ++     
Sbjct: 145 --SKLIYDLADQGGELCSLRYDLTVPFARYVAMNG---ISSIRRYHIGKVYRRDQPVMTK 199

Query: 123 GRFRQFIQCDVDNVG-SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           GR R+F QCD D  G       D+E+  ++ + L ++     +Y + IN+RKILDGI + 
Sbjct: 200 GRMREFYQCDFDIAGPCDPMVYDSEVLRVLCEALTSLD--IGEYTVKINHRKILDGIFQL 257

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  +    +   +  A+DKLDK     VK            + T    L     D + 
Sbjct: 258 AGVPAE----KTRPISSAVDKLDKLPWADVKK-----------EMTVEKGLDEAVADKIG 302

Query: 242 SFLSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
            ++ +           +  E + G    ++G  ++ ++   ++      +++    ++ R
Sbjct: 303 EYVGLKGPGPEVLQKLQSDEALMGIPLAKQGLADMEILFRYLKVYNVL-DKMSFDMSLAR 361

Query: 298 GLEYYTGCVYEAILGFPVMNE------------------------------------KQK 321
           GL+YYTG +YEAI                                             + 
Sbjct: 362 GLDYYTGIIYEAIHESSAPPSLKTIPSVPAPSSINTDAPSSKPKSSKSAATTNEDGIDES 421

Query: 322 PVVFGSVGGGGRYDGLVSRFKG------QNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
            V  GS+  GGRYD LV  F        + VP  G S+G+ R+   ++            
Sbjct: 422 TVGVGSIAAGGRYDNLVGMFAEATGRKAEQVPCVGVSVGVERVYSIMEMRRRKGEEKVRG 481

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
               +  +      L K   +  ML  AGI+       +     Q K AD    P   I 
Sbjct: 482 KETEVFVLGLGGVELEKRMEFATMLWDAGIKTSFSPKVNPKAPAQWKQADDDAIPYVAIL 541

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
              E + G ++IK     +++ ++                + I E+V+ +K+ L  
Sbjct: 542 APKELAAGTVRIK-----EQVGKDAA-------GDAKGEEVKIEEVVAYLKQKLGR 585


>gi|320105592|ref|YP_004181182.1| histidyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924113|gb|ADV81188.1| histidyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 437

 Score =  212 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 98/479 (20%), Positives = 182/479 (37%), Gaps = 63/479 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
             +  RG  D    E  + NR+  + R+++  YGF  I TP+LE ++   + +  + D  
Sbjct: 4   TLKAVRGTRDLLPPETALWNRVEATARSVFSRYGFGEIRTPILESTELFARGVGEETDIV 63

Query: 67  NKGVFSLQDD------DGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEK 119
           +K +++ +D         Q ++LR + TA + R   E+         + Y IGP FR E+
Sbjct: 64  SKEMYTWEDRARAASEKAQSLTLRPENTAGVVRAYIEHKLGDTGHLQKLYYIGPQFRRER 123

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADA-----EMCMMMADTLEAVGIKRNDYHIGINNRK- 173
              GR+RQF Q   + +G     +++     E+  M+A  L+ +GI+R          K 
Sbjct: 124 PQKGRYRQFFQIGAEVIGPVTSGSESPLRDAEVLEMLATLLDELGIERASESNEFRGWKL 183

Query: 174 ILDGILEKIGLHGD----DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            L+ +              +    +  L   D   +     +++L  +   D        
Sbjct: 184 TLNSVGSATDRPRYVAALREALAHVKHLMCEDNQRRAETNPLRVLDSKDEADQE------ 237

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                  +  +  +L  D +    ++   +                          S   
Sbjct: 238 ---LINALPKIADYLDDDSKSHFAQVLAALDA-----------------------CSVPY 271

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
            ++  +VRGL+YYT   +E  +               ++ GGGRYDGL     G   P  
Sbjct: 272 TVNPRLVRGLDYYTRTTFEFTVETG-------LGTQNALLGGGRYDGLSEMIGGPKAPGI 324

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF+IG  RLI+ L++   +T   ++     I  M  + ++ +            G+  E+
Sbjct: 325 GFAIGEDRLILTLQAQ--TTEAAEKKLDAYIAPMGVEQNAAALALARELR--REGLSIEV 380

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
             G+ +      + ADR      +I G  E + G + +K+ A G++      +  S   
Sbjct: 381 GDGTFR-LKKSFEVADRV-ARSILILGENEVASGEITVKNFATGEQEKIARSDLPSTLR 437


>gi|330444098|ref|YP_004377084.1| histidyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807208|gb|AEB41381.1| histidyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 430

 Score =  212 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 97/468 (20%), Positives = 177/468 (37%), Gaps = 58/468 (12%)

Query: 7   LRAELPRGFADCPTK---------EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +  +LP+G  D             +  +   I D+IR +   YGF  I TP+ E ++   
Sbjct: 1   MNVDLPKGVFDIFPNVTQAKQLWRDSSLWLTIEDTIRKLCALYGFSEIRTPVFEKTEVFL 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
                 D   K +++  D  G+ ++LR + TAP+ R   E+        + Y I P+FR 
Sbjct: 61  HVGDHSDIVKKEMYTFLDKKGRSLTLRPEGTAPVVRSFIEHTAEHRGDNKFYYILPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q  V+ +G      DAE+  ++ +  + VG++     +     +    
Sbjct: 121 ERQQMGRYRQHHQFGVEAIGIRHPLRDAEILSLLWEFYKNVGLQCMHLQLNFLGGENTRT 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
                      +    L  L      ++F    +++L  +   D                
Sbjct: 181 HYTAALRTYFKEHFSHLSPLS----QERFTTNLLRILDSKEPEDQELIRH---------A 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ ++S        ++ E +                               ++  +VR
Sbjct: 228 PPILEYVSEVDRAYFDKILEALSNL-----------------------HIPFTVNPRLVR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY+  V+EA   F              +GGGGRYDGL++   G ++PA GF IG+ R
Sbjct: 265 GLDYYSDLVFEAFTTFQGHTYA--------LGGGGRYDGLIAASGGPSLPACGFGIGLER 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +I  L +    +   K     ++  +  ++++ +    ++Q LR+ G+  E+   S +  
Sbjct: 317 VIQTLLAQGGMSLKKKP----MLRLLPLETEADALCFSWSQHLRSLGVPTEVEW-SHRKV 371

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              L  A         I G  E       IK++   +E S      E 
Sbjct: 372 KAALHAASHEQVAYVCIIGARELQEQQFTIKNMFSRQEFSGSQGELEQ 419


>gi|228946954|ref|ZP_04109251.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228812686|gb|EEM59010.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 428

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 129/464 (27%), Positives = 214/464 (46%), Gaps = 42/464 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG   +ETP L   + +       D  
Sbjct: 4   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKSLETPTLNMYELMSYKYGGGDEI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 64  LKEIYTLQDQGKRALALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 123 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQAINIPT 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 180 E----LTSDVILSLDKIEKIGINGVRKDVLER------------GISEEMADTICNTILS 223

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ SM +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 224 CLQLSMADFKEAF-NNPLVADGVNELQQLQQFIIALGINENTI-FNPFLARGLTMYTGTV 281

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++  F+G ++  P  G S G+  +  AL  
Sbjct: 282 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALSQ 333

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKY 423
            E     I     V I  +  +     +     Q LR+   ++ E+ L + +     L Y
Sbjct: 334 KE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNY 384

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           A++ N P  +I G  E     + ++++ +G E+   + +  ++ 
Sbjct: 385 ANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSSLSNYL 428


>gi|163784202|ref|ZP_02179133.1| histidyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880530|gb|EDP74103.1| histidyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 409

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 106/473 (22%), Positives = 182/473 (38%), Gaps = 68/473 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K      RGF D   +  +    I D  R I+ENY F+ I  P +E      + +
Sbjct: 1   MSKVKK-----VRGFQDIYGENAKKYRYISDVARKIFENYNFEEIILPYVEDISLFKRSV 55

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVA-ENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K ++   D  G+ I+LR + TA   R    E         + +  G +FR E
Sbjct: 56  GEATDIVQKEMYVFTDRGGREIALRPEGTASTVRAYIEEKMYAQSSIKKLFYEGAMFRYE 115

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR+RQF Q   +  G S+  ADAE+  M++D L  + I        + N +     
Sbjct: 116 RPQAGRYRQFHQIGAEIFGVSSPLADAELIKMVSDILNTLEIPTRLEINTLGNFEDRKNY 175

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           ++ +    +++                  ++   L + + + +   D TK A L      
Sbjct: 176 IKALKEFLEERKQHLCETC-------NIRIETNPLRVLDCKVETCKDITKEAPL------ 222

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FLS +  +    + E +K                         +     +  +VRG
Sbjct: 223 -ITEFLSDESLERYERIKEYLKAL-----------------------NVEFIENPCLVRG 258

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYT  V+E I          K    G+V  GGRYD LV +  G   PA GF+ GI RL
Sbjct: 259 LDYYTHTVFEFIT--------DKIGAQGTVAAGGRYDKLVEQLGGPPTPALGFAAGIERL 310

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L+ L             LI  +    +   +  +   +LR+   R E+ +    +  
Sbjct: 311 MLLLEKL--------PEDRPLIVVIPITEEHNIEGILTADLLRSNKFRTELIMKEG-SLK 361

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE-IKNNESWREAR 470
           +++K A++      +            ++KD+  G +   E I++     + R
Sbjct: 362 SKMKLANKLGASYVVFV------SDKCELKDMTTGAQEVFENIEDLIEVLKVR 408


>gi|219684770|ref|ZP_03539712.1| histidyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671715|gb|EED28770.1| histidyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 456

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 121/472 (25%), Positives = 204/472 (43%), Gaps = 48/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I ++  +Y FD I+TP+LEYS+ L K     D  
Sbjct: 1   MDVKTLKGFKDYLPKDSLIRIHIVRQIFSVLNSYNFDLIDTPVLEYSELLLKKSG--DES 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D  G+ +S+R+DLT P AR+VA N   + FP R  + G VFR E    GR+R
Sbjct: 59  EKQIYRFKDHGGRDVSMRFDLTVPFARFVATNISDLKFPFRRSQFGKVFRGENSQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA-----VGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG  +  ADAE+  ++   LE      +      + I  ++  IL+   EK
Sbjct: 119 EFMQFDFDIVGEDSFRADAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHLGILNSFFEK 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +G+  +      + +LR IDK+DK G+  VK  L                +  E +D ++
Sbjct: 179 LGIKEES-----IFILRNIDKIDKIGIDKVKEAL-------------LLKIEKEAVDSIL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           S +S+  + +  +  + +K  +   +    +  +   +       +   ++  I RGL+Y
Sbjct: 221 SLVSL--QGTFKDKIQALKSILGDNESVKRVEDVYRHLSLLKI-QDSFNLNLKISRGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI-- 359
           YTG V+E+ +              GSV  GGRYD LVS +       +G           
Sbjct: 278 YTGIVFESEIFGS---------NMGSVCSGGRYDNLVSSYSSSIQKVSGVGGSFGVDRIK 328

Query: 360 -VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL- 411
            +      S            +  ++ DS   + Y       R         I  E++  
Sbjct: 329 DIIDLEKFSYIKIFVTKARSKVLIVNLDSTLQNYYYELATRFRNHDYSKVKNISCEVYFK 388

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             + KN   Q++YA  +     +  G  E     ++++DL K +EL    + 
Sbjct: 389 NKNGKNIKEQIEYALNKEIRFLVFVGQEEYKENKIKVRDLTKKEELLLSFEE 440


>gi|299534930|ref|ZP_07048258.1| histidyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298729572|gb|EFI70119.1| histidyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 429

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 117/454 (25%), Positives = 192/454 (42%), Gaps = 33/454 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+  +  RG  D   ++   R  I  ++ + +  YG  P+ETP+L Y++ +        
Sbjct: 2   KKMDYQNVRGTQDYLPEQEATRRVIRRTLEDTFIAYGCKPLETPILNYTELMASKYGGGA 61

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              + +++L D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GR
Sbjct: 62  EILQEMYTLTDRGERDLALRYDLTIPFAKVVAMN-PAIAMPFKRYEIGKVFRDGPIKAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           FR+F QCDVD VG  ++ A+AE+ MM  D  + + +K N   +  NNRK+L G+L+   +
Sbjct: 121 FREFTQCDVDIVGIESQAAEAELMMMAIDAFDQLKLKIN---LQFNNRKLLVGLLQLFEV 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D                    L  ++ +  +              L+   I  +  FL
Sbjct: 178 EQDQ------------MNRVILTLDKIEKIDEKTMLVELKAL----GLSDNSIHKIKHFL 221

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
               + SM          +  ++G  EL+ ++  +   G +   I  +  + RGLE YTG
Sbjct: 222 EKRPQISMAYFEGFATENVFLQQGLQELMELTSYLEALGISEQCI-FNPFLARGLEIYTG 280

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +YE  L    +          S+G GGRYD  +      N       I     +    +
Sbjct: 281 TIYEIFLADGTIR--------SSIGSGGRYDNAIGGLLETNQTYATVGISFGLDV-IYTA 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           LE S    +    V I  +   ++   +       LR    + E+ L S K     ++ A
Sbjct: 332 LELSGKIEQNAPSVDIYIIPLGTE--KEALKLATALRREKYKIEVEL-SGKKVKKAMEKA 388

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           +R N P  I+ G  E ++   +IKD+  G+E   
Sbjct: 389 NRENTPKVIVLGDNEVNQNTYKIKDMKSGEEEIV 422


>gi|157273383|gb|ABV27282.1| histidyl-tRNA synthetase [Candidatus Chloracidobacterium
           thermophilum]
          Length = 434

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 84/473 (17%), Positives = 170/473 (35%), Gaps = 65/473 (13%)

Query: 15  FADCPTKEI----------RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DE 63
             D     +               + D  R  +  YGF  I TP+ E ++   + +  + 
Sbjct: 8   TRDLLPAALSNDRDASAFIHRFQFVEDLAREWFRRYGFQEIRTPIFERTELFVRGVGSET 67

Query: 64  DRPNKGVFSLQDD-----DGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRN 117
           D   K +++ +D      +G+ ++LR + TAP+AR   ++         R Y IGP FR 
Sbjct: 68  DIVTKEMYTWRDRAGEDGEGESLTLRPESTAPVARAYIQHQMWQRAETVRLYYIGPQFRR 127

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GRFRQF Q   + +GSS   A         + +  +  +     + +    + + 
Sbjct: 128 ERGQRGRFRQFFQIGAEVLGSSDHPALDA---EGIELVMGLLTEAGIPKLELRLNTVGNA 184

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
                 +    +         + D   +     +++L  +   D     T         +
Sbjct: 185 AGRARFVAVIRETLAPRAHELSEDSRRRLETNPLRILDSKAEQDQPLIAT---------L 235

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +   L          +   +                               + + +VR
Sbjct: 236 PPIYDVLDEACRAHFDAVRRYLD-----------------------RAGIPYVVDARLVR 272

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYT  V+E +   P +          ++ GGGRYDGLV    G      GF++G+ R
Sbjct: 273 GLDYYTQTVFEVVSQAPAI------GAQNALAGGGRYDGLVETLGGPPTKGFGFALGLDR 326

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +++A+   ++     +      +  +     +L       +  R AG+       S ++ 
Sbjct: 327 VVLAMPEEQAPEPRPE------LFVIYLGESALEPALEAVRQARRAGVATLFDP-SPRSL 379

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            + L+ A++     A++ G  E + G   ++DL + ++ +   +    +  A+
Sbjct: 380 KSALRLANKCGARFALLLGEAELASGQWVVRDLMRAEQTTVPAEGWLQYLLAK 432


>gi|319760650|ref|YP_004124588.1| histidyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039364|gb|ADV33914.1| histidyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 425

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 89/455 (19%), Positives = 180/455 (39%), Gaps = 47/455 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  DC  ++  +   + + ++ +  +YG++ I  P++E++D   + + +  D  
Sbjct: 3   KIQSIRGMHDCLPQDAVLWQSVENILKTVLNSYGYNEIRFPIVEFTDLFKRAIGEVTDVV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D +G  ++LR + TA   R   E+        R + +GP+FR E+   GR+R
Sbjct: 63  EKEMYNFNDRNGNNLTLRPEGTAGCVRAGIEHSLFYHQEQRLWYMGPMFRRERPQKGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  ++  G      + E+ +++    + +GI            + L   L  IGL  
Sbjct: 123 QFHQFSIEAFGQIGPDIEVELILIIVRCWKMLGIS-----------EHLTLELNSIGLLS 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
              +    ++       D      ++ L             +   L   +  I+  +L  
Sbjct: 172 SRIIYRSKLINFLEKNKDSLNSDAIRRLYSNPIRILDTKDVQLKKL-LMKAPILYDYLDE 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +   ++L +L+  +                            ++  +VRGL+YY   V
Sbjct: 231 YSKNHFNKLCKLLDLS-----------------------GVSYVVNPYLVRGLDYYNSTV 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          +  V  ++  GGRYD L  +  GQ+VPA G SIG+ RL++ +K ++
Sbjct: 268 FEWVTN--------RLGVQKTICAGGRYDELTKQLGGQSVPAVGLSIGLERLLLLMKDVD 319

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYA 424
           ++         + +  ++          M ++ +R     +R  M  G   NF  Q   A
Sbjct: 320 NNAIVASSCVYIDVYVINLSCCFQQYSFMLSEHIRNELPFLRLMMNQGGG-NFDKQFNRA 378

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            + N    +I          + +KDL    + +  
Sbjct: 379 IKNNSRFVLIINDHNVYEKTVVLKDLVCKSQETVS 413


>gi|116071586|ref|ZP_01468854.1| histidyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065209|gb|EAU70967.1| histidyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 421

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 96/455 (21%), Positives = 179/455 (39%), Gaps = 54/455 (11%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   + ++    +    R  ++  GF  I TPL+E +D   + + +  D   K +++ 
Sbjct: 1   MVDLLPQALQRWQAVEAEARAHFQRSGFGEIRTPLMEPTDLFCRGIGEATDVVGKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D   +  +LR + TA + R   ++      P + +  GP+FR E+   GR RQF Q  V
Sbjct: 61  NDRGERSCTLRPEGTASVVRSALQHGLLTQGPQKLWYAGPMFRYERPQAGRQRQFHQIGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGLHGDDKLNE 192
           + +G+S   +D E+  +  D L ++G+   +  +    +     G    +    +    +
Sbjct: 121 EWLGASNARSDVEVIALAWDFLASLGVGGLELQLNSLGSADDRKGYRTALVAWLEQIAEQ 180

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                RA     +     +++L  + +   +           E    ++  LS +     
Sbjct: 181 LDEDSRA-----RLSTNPLRILDSKNKATQA---------LLESAPTLIDALSSESRTRF 226

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             + + +                               ++  +VRGL+YY    +E    
Sbjct: 227 DLVQQGLTTL-----------------------GIPFCLNPRLVRGLDYYCHTAFEIT-- 261

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                   +     +V GGGRYDGLVS+  G + PA G+++G+ RL++ L++   +    
Sbjct: 262 ------SDQLGAQATVCGGGRYDGLVSQLGGADTPAVGWALGLERLLLVLEAAAKADPVG 315

Query: 373 KEMGPV-----LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
           +    V         ++  + +        + LR+ G+  E+   S   FG Q K ADR 
Sbjct: 316 RAAQVVTAPKPDAYLVNRGAQAEGAALALARALRSQGLTVELD-SSGAAFGKQFKRADRC 374

Query: 428 NCPLAIIQGTGERSRGMLQIKD-LAKGKELSREIK 461
               A++ G  E  RG + IK  L KG E +  I 
Sbjct: 375 GARFALVLGDEEAGRGEVLIKPLLEKGDEATWAID 409


>gi|319637812|ref|ZP_07992578.1| histidyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400967|gb|EFV81622.1| histidyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 431

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 99/497 (19%), Positives = 175/497 (35%), Gaps = 92/497 (18%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVSRWTRTYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+           +     
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L +     D+            D   +     +++L  +            
Sbjct: 184 AHRAALVEYLTRYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +V +L    +        ++ G                          + 
Sbjct: 223 LQEICNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +  +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ 
Sbjct: 260 IENPRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M
Sbjct: 312 GFAMGIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-M 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                ++   Q+K AD      A+I    E + G + +KD+                 + 
Sbjct: 367 QHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------QG 409

Query: 470 RVAQITIPISELVSTVK 486
           +  Q T+  ++L  T++
Sbjct: 410 KHEQQTVAAADLTDTLQ 426


>gi|154151276|ref|YP_001404894.1| histidyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166228579|sp|A7I940|SYH_METB6 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|153999828|gb|ABS56251.1| histidyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 410

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 106/464 (22%), Positives = 181/464 (39%), Gaps = 56/464 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D    E+  R  I   +R     +G+  + TP  E  +       +     +
Sbjct: 2   IQKPRGTRDFLPDEMEARRSIEAKMREAVRRFGYREVCTPEFEELELFTLRSGEG--IMQ 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ ++LR ++TA + R           P R       FR E+   GR+RQF
Sbjct: 60  EMYVFEDKGGRKLALRPEITAAVIRMYINEAKVAPKPLRWCYFADCFRYERPQKGRYRQF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G+    ADAE+ M+ A+ L A G+        +   K L   L         
Sbjct: 120 WQFGAELIGADTALADAEVIMLAAEALNATGVTWELKVGHLAFMKNLLADL--------- 170

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              +     R +  LDK   +G+   L   R     D                S  ++  
Sbjct: 171 ---DPAAQRRVMAHLDKKDFEGLAETLAGMRKSGLND----------------SLTALVE 211

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +++ E +E+             +     ++  SG    R  ++  I RGL+YYTG V+E
Sbjct: 212 CRTLAEAFEIAGTIPE----KERVEQTMGILDASG---VRYSLNFGIARGLDYYTGMVFE 264

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                      +       + GGG Y  L   F G +V + GF+IG  R++V+L  + ++
Sbjct: 265 GF--------AENLGAENQILGGGAY-RLAHLFGGDDVASCGFAIGFDRVMVSLGEVFAA 315

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            + I  +            +  S      +  R AGIRAEM L   +  G QL +A +  
Sbjct: 316 KDTIAGIVCT--------DEGRSFALSVAREFRAAGIRAEMDL-MGRGLGAQLAHASKT- 365

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              A++ G  E   G + +K+L  G++ + +     +  +A  A
Sbjct: 366 ADFAVVIGKREADAGQVTLKNLHSGEQKTLDPAAAIAEVKAHGA 409


>gi|219685912|ref|ZP_03540716.1| histidine--tRNA ligase [Borrelia garinii Far04]
 gi|219672554|gb|EED29589.1| histidine--tRNA ligase [Borrelia garinii Far04]
          Length = 456

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 122/472 (25%), Positives = 204/472 (43%), Gaps = 48/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I ++  +Y FD I+TP+LEYS+ L K     D  
Sbjct: 1   MDVKTLKGFKDYLPKDSLIRIHIVRQIFSVLNSYNFDLIDTPVLEYSELLLKKSG--DES 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D  G+ +S+R+DLT P AR+VA N   + FP R  + G VFR E    GR+R
Sbjct: 59  EKQIYRFKDHGGRDVSMRFDLTVPFARFVATNISDLKFPFRRSQFGKVFRGENSQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA-----VGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG  +  ADAE+  ++   LE      +      + I  ++  IL+   EK
Sbjct: 119 EFMQFDFDIVGEDSFRADAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHLGILNSFFEK 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +G+  +      + +LR IDK+DK G+  VK  L                +  E +D ++
Sbjct: 179 LGIKEES-----IFILRNIDKIDKIGIDKVKEAL-------------LLKIEKEAVDSIL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           S +S+  + +  +  + +K  +   K    +  +   +       +   ++  I RGL+Y
Sbjct: 221 SLVSL--QGTFKDKIQALKSILGDNKSVKRVEDVYRHLSLLKI-QDSFNLNLKISRGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI-- 359
           YTG V+E+ +              GSV  GGRYD LVS +       +G           
Sbjct: 278 YTGIVFESEIFGS---------NMGSVCSGGRYDNLVSSYSSSIQKVSGVGGSFGVDRIK 328

Query: 360 -VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL- 411
            +      S            +  ++ DS   + Y       R         I  E++  
Sbjct: 329 DIIDLEKFSYIKIFVTKARSKVLIVNLDSTLQNYYYELATRFRNHDYSKVKNISCEVYFK 388

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             + KN   Q++YA  +     +  G  E     ++++DL K +EL    + 
Sbjct: 389 NKNGKNIKEQIEYALNKEIRFLVFVGQEEYKENKIKVRDLTKKEELLLSFEE 440


>gi|255322190|ref|ZP_05363336.1| histidyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300563|gb|EET79834.1| histidyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 415

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 94/462 (20%), Positives = 170/462 (36%), Gaps = 55/462 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               RG  D    +  +  RI+     + +NYG++ +  P LE +    + + +  D   
Sbjct: 2   ISALRGMKDVLPPQSGLYERIIKICEEVAKNYGYEFVLAPHLEQTALFRRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++  +D  G  + LR + TA + R   E  FD      R +  G +FR E+   GR R
Sbjct: 62  KEMYQFEDKGGNDVCLRPEGTAGVVRAFIEAKFDRAGGVRRYFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q   +  G  +   DA + +M+ +    +GIK       + +   +    EK+    
Sbjct: 122 EFHQFGCECFGEPSVYEDASVILMINEIFSRLGIKTKLLINSLGDAASMGTYREKLVKFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D+   +        D   +     +++L  +          +      E   +++  L+ 
Sbjct: 182 DEHEGQI-----CEDCKRRKLTNPIRVLDCK---------VESCQKIYENAPLIIGSLND 227

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +      +L E++ G                            +I   +VRGL+YY    
Sbjct: 228 ECAGEFKKLQEILSGN-----------------------GVEFEIDPKLVRGLDYYCKTA 264

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +                +V GGGRYD LV    G+     GF++GI R++  L   E
Sbjct: 265 FEFVSNE--------IGAQSAVAGGGRYDRLVEYLGGKASYGVGFAMGIERIMEILGGRE 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  E     +     D+D +         LR   +   +     K     L  AD 
Sbjct: 317 ------SESKRNGVYIGAMDADGVDAVYKIAINLRK-NLPVLVSY-EPKKLQKHLNAADN 368

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            N  + +  G  E   G + +KDL++  E + ++ + ES  +
Sbjct: 369 ANARVCLCVGEDELKSGKIWLKDLSEKAEKTIDLADLESELK 410


>gi|302380644|ref|ZP_07269109.1| histidine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|303233887|ref|ZP_07320536.1| histidine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302311587|gb|EFK93603.1| histidine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302494812|gb|EFL54569.1| histidine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 431

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 123/464 (26%), Positives = 205/464 (44%), Gaps = 36/464 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++     G  +   ++  + + I   I +++    F  I+TP +E  D L      E   
Sbjct: 2   IQPSTLPGMMELLPEDQLVFDTIKRKIEDVFIKNAFFSIDTPAIEKLDVLLSKGGGE--T 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K VF   D+  +   LR+DLT PLA+YV+     + FP R Y+I  V+R E++  GR++
Sbjct: 60  SKQVFR-IDNSKKNQGLRFDLTVPLAKYVSMYMQDLAFPFRRYQIAKVYRGERNQKGRYK 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD+D +G+   +   +  ++         I   ++    NNRKIL+G    +G+  
Sbjct: 119 EFYQCDIDIIGNEKLSLYNDAEIVKCMYEALKSIDVPEFEFQFNNRKILNGYFSYLGID- 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR IDKLDK G+  VK  L +             NL + +ID ++ FL I
Sbjct: 178 -----DFESCLRVIDKLDKIGIDNVKEELSKI------------NLDASKIDTLLKFLEI 220

Query: 247 DL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           D   ++ + +L  L         G NEL  + + +   G N   IKI+ +I RGL+YYTG
Sbjct: 221 DGTNQEIIEKLESLNIDNELFTCGVNELKFVYQDILSLGVNPENIKINLSITRGLDYYTG 280

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 GS+  GGRYD L + F    +P  G SIG++RL   L+ 
Sbjct: 281 SVFETFFKDY--------PEIGSICSGGRYDSLANNFTKSKLPGVGMSIGLTRLFYQLQE 332

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L            ++I    ++ +           LR + ++   +L   K    +  YA
Sbjct: 333 LNLVKGKQTNFDCIIIPMKGYEKN----AVKLMNDLRNSSVKCMSYLEDDK-LKKKFNYA 387

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           D+ +    II G  E  +    ++++  G +   E+       +
Sbjct: 388 DKLSVKYVIIIGQDEVEQNKFTLRNMENGNQELLELNEIIEKLK 431


>gi|325130012|gb|EGC52806.1| histidyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
 gi|325135932|gb|EGC58542.1| histidyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 431

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 176/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGERADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+  ++L +T++
Sbjct: 414 QTVAAADLTNTLQ 426


>gi|261365615|ref|ZP_05978498.1| histidine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288565847|gb|EFC87407.1| histidine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 431

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 99/493 (20%), Positives = 175/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D + +    YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDVVGSWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  + +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWDKLGIRDYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTCYEDKLDE--------DSKRRLKTNPLRVLDSKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +  +L  +          +++G                          +   + 
Sbjct: 227 CNAAPHLTDYLGEESRNHYSRFKAMLEGL-----------------------GIQYVENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGGGADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L+ T++
Sbjct: 414 QTVAADDLIHTLQ 426


>gi|296170819|ref|ZP_06852387.1| histidine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894524|gb|EFG74263.1| histidine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 420

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 93/469 (19%), Positives = 176/469 (37%), Gaps = 68/469 (14%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGV 70
           P+G  D    +      + D +       G+  IE P+ E +    + + +  D  +K +
Sbjct: 7   PKGVPDYVPPDSAQFVAVRDGLLGAARRAGYGDIELPIFEDTALFARGVGESTDVVSKEM 66

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  D   + ++LR + TA + R V E+       P +    GP FR E+   GR+RQ  
Sbjct: 67  YTFADRGDRSVTLRPEGTAGVVRAVIEHGLDRGALPVKLCYAGPFFRYERPQAGRYRQLQ 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG--------IKRNDYHIGINNRKILDGILEK 181
           Q  V+ +G      DAE+  +      ++G            D       R++L   L  
Sbjct: 127 QVGVEAIGVDDPALDAEVIAVADAGFRSLGLDGFRLEITSLGDDSCRPQYRELLQEFLFG 186

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           + L  + +    +  LR +D        GV+ +  +                     +++
Sbjct: 187 LDLDDETRRRAEINPLRVLDDKRP----GVRAMTAD-------------------APVLL 223

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             LS   ++    +   +                               I+  +VRGL+Y
Sbjct: 224 DHLSDVAKQHFDTVLAHLDAL-----------------------GVPYVINPRMVRGLDY 260

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT   +E +                 +GGGGRYDGL+    GQ++   GF +G+ R ++A
Sbjct: 261 YTKTTFEFV--------HDGLGAQSGIGGGGRYDGLMRELGGQDLSGIGFGLGVDRTLLA 312

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L++   S           +  +     +  +  +    LR AG R +M  G  +     +
Sbjct: 313 LRAEGKSVGETARCD---VFAVPLSEQAKLQLAVLAARLRAAGARVDMAYG-DRGLKGAM 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           + ADR    +A++ G  +   G + +KDL  G+++S    +  +   ++
Sbjct: 369 RAADRSGARVALVLGDRDIEAGTVGVKDLTTGEQVSVPADSVAAQVLSQ 417


>gi|62550772|emb|CAG44460.1| histidyl t-RNA synthetase [Lactobacillus buchneri]
          Length = 428

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 98/461 (21%), Positives = 174/461 (37%), Gaps = 49/461 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + P+G  D    EI +  ++    R+ +  +G+  I TP+ E  +   + + D  D   
Sbjct: 6   YQRPKGTVDILPGEIEVWQKVEKIARDTFNQFGYRGIRTPIFENYNVFARNVGDTSDIVE 65

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGR 124
           K ++   D  G+ ++LR + TA   R   EN         P + Y +GP+FR E+   GR
Sbjct: 66  KQMYDFDDKGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFRYERPQSGR 125

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q   + + S +   D E+     +  + +GI      I     K       K  +
Sbjct: 126 QRQFTQIGCEALNSESPQIDVEVISEALEFFKRLGINDLKLTINTLGDKETRDAYHKALI 185

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                   +L    + D  ++     +++L  +   D                  ++  L
Sbjct: 186 DYLKPFYNQL----SDDSKERMYKNPLRVLDSKDEQDKK---------IVANAPSILDSL 232

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S    K   E+  L+       +  +++                       VRGL+YYT 
Sbjct: 233 SDYSAKYFAEVKRLLDKLNIQYEIDSDM-----------------------VRGLDYYTQ 269

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++E +    V         + +V GGGRY+GL+S+  G +    G+ IG+   ++ L +
Sbjct: 270 TIFEIMSDSDVFG-----GGYVTVCGGGRYNGLISQLGGPDEGGIGYGIGV-ERLLLLVN 323

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E+     K    V   + D+  D L         +R  G+ A+      K  G+Q+K A
Sbjct: 324 KENPDFAPKYGPDVYFASADNAGDEL--AFEVLDKIRKNGVEADKNYQDIK-VGSQIKEA 380

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            RR      + G  E   G  ++  +   K  +  +K  E 
Sbjct: 381 IRRKARYYAVIGKKEVDEGSFELSKVDSDKTQTVSVKEFED 421


>gi|225163703|ref|ZP_03726006.1| Histidine--tRNA ligase [Opitutaceae bacterium TAV2]
 gi|224801694|gb|EEG19987.1| Histidine--tRNA ligase [Opitutaceae bacterium TAV2]
          Length = 461

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 108/485 (22%), Positives = 190/485 (39%), Gaps = 44/485 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            LP GF +        RN I    R     +GF   + P+LE  +         D     
Sbjct: 6   SLP-GFREFYPDAFARRNHIFRMWRQANHAFGFQEYDAPILEPLELYKAKSG--DEIEAQ 62

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +FS  D  G+ ++LR ++T  + R V    + +  P + + IG  +R E+   GR R F 
Sbjct: 63  LFSFTDKGGRDVALRPEMTPTVCRLVGAKANALKRPIKWFSIGEFYRYERAQKGRERAFF 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q + D  G     A+ E+  ++   + + G+   D+++ +++R +    LE +G      
Sbjct: 123 QLNCDIFGEPGPEAEIELIALLVQAIRSFGLTAADFYVRLSDRNLWFYYLEALGFAD--- 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +   +L A+DK +K G    K                   LT E    ++ FL +   
Sbjct: 180 -AQIRGILSAVDKFEKIGDDAFKPYAEAHGA-----------LTPELKAKVLEFLGVKSL 227

Query: 250 KSMHELYE--LVKGTIAGEKGFNELVVI---SELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            ++ ++    + +   AGEK    L         +   G     +++   +VRGL YYTG
Sbjct: 228 PALEKILAPHIAQNPTAGEKLTARLADWRKLLGGLEAMGLGE-FVEVDFGVVRGLAYYTG 286

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+EA           +     ++ GGGRY+ LV++    ++PA GF+IG   + + L+ 
Sbjct: 287 FVFEAF---------DRKGELRAIAGGGRYNDLVAKLGYGDLPAVGFAIGDVTMGLLLEQ 337

Query: 365 LESSTNNIKEMGPVLIT----------TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              +   ++     ++                             LR AG R E  L ++
Sbjct: 338 RGLTPAYVQAADIYVVIGDSTNTNSEGGGGGVGKERIAAFGAINDLRAAGYRVEYPLKTT 397

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             FG Q K A      LA+I G+ E ++G+++ +DL    E         +      +  
Sbjct: 398 A-FGKQFKAAVESGAKLALIFGSDELAKGVVKFRDLTDRSEHEIPRDQVPAAVRDFFSGN 456

Query: 475 TIPIS 479
           T    
Sbjct: 457 TKTAD 461


>gi|224534329|ref|ZP_03674907.1| histidine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514431|gb|EEF84747.1| histidine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 456

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 121/472 (25%), Positives = 206/472 (43%), Gaps = 48/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I ++  +Y FD I+TP+LEYSD L K     D  
Sbjct: 1   MDIKTLKGFKDYLPKDSLIRIHIVRQIFSVLNSYNFDLIDTPVLEYSDLLLKKSG--DET 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+ G+ +S+R+DLT P AR+VA N   + FP R  + G VFR E    GR+R
Sbjct: 59  EKQIYRFKDNGGRDVSMRFDLTVPFARFVATNISDLKFPFRRSQFGKVFRGENSQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMAD-----TLEAVGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG  +   DAE+  ++        L  +      + I  ++  IL+   E+
Sbjct: 119 EFMQFDFDIVGEDSFRGDAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHLGILNSFFEQ 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +G+         L +LR IDK+DK G+  VK  L                +  E +D+++
Sbjct: 179 LGIKEKS-----LFILRNIDKIDKIGIDKVKEAL-------------LLEIEKEAVDLIL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           S +++  + +  +  +++K  +   +    +  + + +       +   ++  I RGL+Y
Sbjct: 221 SLVNL--QGTFKDKIQVLKSILGDNESVKRVEDVFQHLSLLKI-QDSFNLNLKISRGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI-- 359
           YTG V+E+ +              GSV  GGRYD LVS F G     +G           
Sbjct: 278 YTGIVFESEVFGS---------NMGSVCSGGRYDNLVSSFSGSTQKVSGVGGSFGVDRIK 328

Query: 360 -VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL- 411
            +      S            +  ++ DS   + Y       R         I  E++  
Sbjct: 329 DIIDLEKFSYVKIFVTKARSKVLIVNLDSALQNYYYELATRFRNHDYSKVKNISCEVYFK 388

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             + KN   Q++YA  +     +  G  E     ++++DL K +EL    + 
Sbjct: 389 NKNGKNIKEQIEYALSKEIRFLVFVGQEEYKENKMKVRDLTKKEELLLSFEE 440


>gi|57239428|ref|YP_180564.1| histidyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579400|ref|YP_197612.1| histidyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81672776|sp|Q5HAI0|SYH_EHRRW RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|57161507|emb|CAH58433.1| histidyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58418026|emb|CAI27230.1| Histidyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 414

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 100/456 (21%), Positives = 171/456 (37%), Gaps = 55/456 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +    RG  D    E+     I    + I   YGF P++TP++E+++   K     D   
Sbjct: 5   KLREVRGTKDLLDDELYKFQYIQHLAQTIASRYGFIPVDTPIIEFTEVFTKLGNTSDIVT 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++ +D  G+ I+LR + T+ + R +     TI    + +  GPVFR E+    R RQ
Sbjct: 65  KEMYNFKDKAGEDITLRPEFTSAIVRLLISKNLTIP--VKLFSSGPVFRYERPQKCRQRQ 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q + +  GS +  AD EM  +  + L  +  K +D      N       +    +H  
Sbjct: 123 FHQINFEFFGSDSPIADVEMISLCYNILSEL--KLSDRIKLEINFLGDQETINSYKIHLV 180

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           + LN+    L   D   +  +  +++L  +   D                  +  F + +
Sbjct: 181 EYLNKYQKDLS-EDSQRRLVVNPLRILDSKSPEDCKILL---------NAPSISDFYNQN 230

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +    E+ + +                          S    I+  IVRGL+YY   V+
Sbjct: 231 SQNFFKEVLDGLDNL-----------------------SINYVINHNIVRGLDYYCKTVF 267

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                  SV  GGRYDGLV    G + PA GF+ G+ RL   +     
Sbjct: 268 EFTTSE--------LGSQNSVIAGGRYDGLVKSMGGHSTPAIGFAAGVERLSALIDYEHK 319

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                       I  +    D++S        LR  GI          +  N+L+ A+  
Sbjct: 320 KPKR--------IVLIPIGDDAISYAIKLAYELRCKGIHVCWNNYRGTSLKNELRKANDT 371

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +    +I G  E     +++KD+  G + +  + + 
Sbjct: 372 DI--VLIFGDEELQSNTVKVKDMKTGDQQNVAVCDL 405


>gi|313668679|ref|YP_004048963.1| histidyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006141|emb|CBN87602.1| putative histidyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 431

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 100/493 (20%), Positives = 174/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYGYRQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD    +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWGKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGLA-----------------------IQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGTDLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+  ++L  T++
Sbjct: 414 QTVSAADLTDTLQ 426


>gi|261379054|ref|ZP_05983627.1| histidine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269144510|gb|EEZ70928.1| histidine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 431

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 174/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGTHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 414 QTVAAEDLTPTLQ 426


>gi|254525623|ref|ZP_05137675.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537047|gb|EEE39500.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 426

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 92/437 (21%), Positives = 171/437 (39%), Gaps = 52/437 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           RG  D    ++     +   +           I TP+LE ++   + + +  D  +K ++
Sbjct: 8   RGTVDLLPNKLIKWQNVEKILLEQLSRASIKEIRTPILEMTELFVRGIGEGTDVVSKEMY 67

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           +  D   +  +LR + TA +AR + ++  +     + + +GP+FR E+   GR RQF Q 
Sbjct: 68  TFLDRGERSCTLRPEGTASVARALIQSGISSNPLQKLWYMGPMFRYERPQAGRQRQFHQL 127

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            V+ +G  +  +D E+  +  D L+ +GIK  +  I            +K  L+  +   
Sbjct: 128 GVEFIGHDSVRSDIEIIALAWDILDKLGIKELNLEINTLGNTNDRSNFQKSFLNWLEINK 187

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           + L     +D  ++     +++L  +                 E    +  FL       
Sbjct: 188 DSLD----LDSQNRITKNPLRILDSKNIQTKK---------ALENAPRLFDFL------- 227

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                     +    K +++L    E+++           +  +VRGL+YYT   +E   
Sbjct: 228 ----------SEKSLKRYSDLKNQLEVLK------IPYVENFNLVRGLDYYTHTAFEIT- 270

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                          +V GGGRYD L+ +  G N PA GF+IG+ RLI+          N
Sbjct: 271 -------SGALGSQATVCGGGRYDDLIKQMGGPNTPAIGFAIGLERLILLAGKELEVPRN 323

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   I  ++    + S     ++ LR   +  E+ L S  +F  Q K A++     
Sbjct: 324 TD------IYIINQGLIAESYAMDLSRKLRKHDLIVELDL-SGSSFSKQFKKANKLKSKS 376

Query: 432 AIIQGTGERSRGMLQIK 448
            I+ G  E ++    I+
Sbjct: 377 IIVIGDDEAAKREFLIR 393


>gi|119952938|ref|YP_945147.1| histidyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119861709|gb|AAX17477.1| histidyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 456

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 124/479 (25%), Positives = 206/479 (43%), Gaps = 48/479 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +GF D   KE  IR  I+  I ++  +Y FD I+TP+LEYS+ L +     D  
Sbjct: 1   MDVRTLKGFRDYLPKEALIRTHIIKQIYSVLVSYNFDLIDTPILEYSEFLLRKSG--DEV 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K  +  +D+  + +S+R+DLT P AR++A N   + FP R  +IG VFR E    GR+R
Sbjct: 59  EKQTYRFKDNGDRDVSMRFDLTVPFARFMASNRSKLKFPFRRSQIGKVFRGENTQRGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMAD-----TLEAVGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG     +DAE+  ++        L  +      + I  ++  IL+  ++K
Sbjct: 119 EFMQFDFDIVGEDTFRSDAEILSIVYCGLEEIFLNFIEGINRKFVIHFSHIGILNAYIDK 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +GL           +LR IDKLDK G++ V+  L                +  E +D+++
Sbjct: 179 LGLKDK-----ATFILRNIDKLDKMGIESVRENL-------------LVQINEEHVDLIL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F++++   +  +  E +KG +        +  +   +   G   +    +  IVRGL+Y
Sbjct: 221 EFINLEG--AFWDKLETLKGVLENNDAVKRIEDVFVHLSALGI-QDAFNFNLKIVRGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG--LVSRFKGQNVPATGFSIGISRLI 359
           YTG V+EA         +   +  GS+  GGRYD    +     Q V   G S GI R+ 
Sbjct: 278 YTGIVFEA---------EMIGINMGSICSGGRYDNLLSLFSSSLQKVSGVGGSFGIDRIQ 328

Query: 360 VALK-SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT------AGIRAEMFL- 411
             ++    +            +  ++ D      Y       R         I  E++  
Sbjct: 329 DIIEIEKFNYIKLFVVKASSRVLIVNIDDSLQDYYYKLADKFRRHDYSKINNIACEVYPK 388

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               KN   Q++YA  +     I  G  E     L+++DL K +EL         + + 
Sbjct: 389 SKEGKNIKVQIEYALNKAIRFLIFVGQDEYREDKLKVRDLTKKEELLLSFDEAIKFIKG 447


>gi|169824387|ref|YP_001691998.1| histidyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|229558667|sp|B0S168|SYH_FINM2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|167831192|dbj|BAG08108.1| histidyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 431

 Score =  210 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 123/464 (26%), Positives = 205/464 (44%), Gaps = 36/464 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++     G  +   ++  + + I   I +++    F  I+TP +E  D L      E   
Sbjct: 2   IQPSTLPGMMELLPEDQLVFDTIKRKIEDVFIKNAFFSIDTPAIEKLDVLLSKGGGE--T 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K VF   D+  +   LR+DLT PLA+YV+     + FP R Y+I  V+R E++  GR++
Sbjct: 60  SKQVFR-IDNSKKNQGLRFDLTVPLAKYVSMYMQDLAFPFRRYQIAKVYRGERNQKGRYK 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD+D +G+   +   +  ++         I   ++    NNRKIL+G    +G+  
Sbjct: 119 EFYQCDIDIIGNEKLSLYNDAEIVKCMYEALKSIDVPEFEFQFNNRKILNGYFSYLGID- 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    LR IDKLDK G+  VK  L +             NL + +ID ++ FL I
Sbjct: 178 -----DFESCLRVIDKLDKIGIDNVKEELSKI------------NLDASKIDTLLKFLEI 220

Query: 247 DL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           D   ++ + +L  L         G NEL  + + +   G N   IKI+ +I RGL+YYTG
Sbjct: 221 DGTNQEIIEKLESLNIDNELFTCGVNELKFVYQDILSLGVNPENIKINLSITRGLDYYTG 280

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E                 GS+  GGRYD L + F    +P  G SIG++RL   L+ 
Sbjct: 281 SVFETFFKDY--------REIGSICSGGRYDSLANNFTKSKLPGVGMSIGLTRLFYQLQE 332

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L            ++I    ++ +           LR + ++   +L   K    +  YA
Sbjct: 333 LNLVKGKQTNFDCIIIPMKGYEKN----AVKLMNDLRNSSVKCMSYLEDDK-LKKKFNYA 387

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           D+ +    II G  E  +    ++++  G +   E+       +
Sbjct: 388 DKLSVKYVIIIGQDEVEQNKFTLRNMENGNQELLELNEIIEKLK 431


>gi|111035798|emb|CAL29425.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Onchocerca
           volvulus]
          Length = 427

 Score =  210 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 92/467 (19%), Positives = 164/467 (35%), Gaps = 74/467 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           +  +  RG  D    E      I  +   I   YGF P +TP+ EY++   + L    D 
Sbjct: 15  MTTQPVRGTKDLLFDEWYKFKYIEQTANRISNLYGFLPAQTPIFEYTEVFTRTLGNSSDI 74

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            NK +++  D  G+ I+LR + TA + R + E         + +  GP FR E+   GR 
Sbjct: 75  INKEMYTFNDKGGKSITLRPEFTAAVVRLLIEKKLQTP--IKLFSTGPAFRYERPQKGRQ 132

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q + +  G      D E+  +    L   G+ +                  R+ L 
Sbjct: 133 RQFHQINFEVFGIEDPKTDVELISLAQHLLTEFGLDKNLRLEINSLGSSETMPKYREALV 192

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
              +K      +            D  ++     +++L  + + D               
Sbjct: 193 SYFKKFQNDLSE------------DSQNRLIKNPLRILDSKDKKDKE---------IISD 231

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +    +                          L    +++      +    ++S +V
Sbjct: 232 APKISDHYTKGS-----------------------LYFFDQILNGLTILNIPYTVNSKLV 268

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +         +     G+V  GGRYD L+S    +  PA GF+ GI 
Sbjct: 269 RGLDYYCHTVFEFVT--------EDLGGQGTVFAGGRYDNLMSSVGEKYTPAIGFAGGIE 320

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R++  +        +           +    ++     +    LR +G+        S  
Sbjct: 321 RIMELI--------SYSIKEERPTYLVPIGGEAEKYALILANKLRRSGLYVIHEY--SGT 370

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             ++++ A + N   A+I G  E S   L+IKD+  G+E      + 
Sbjct: 371 LKSRMRKASQANAKAAVIFGNEELSSKTLKIKDMDTGEEKIVTCDDI 417


>gi|157872209|ref|XP_001684653.1| histidyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68127723|emb|CAJ05976.1| putative histidyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 473

 Score =  210 bits (533), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 97/464 (20%), Positives = 182/464 (39%), Gaps = 37/464 (7%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
             +  E  +G  D P +++R+R  +          +GF+  + P+LE  +   +   +E 
Sbjct: 46  NMIEKEPVQGCRDFPPEDMRVRRHLFGVFHETARKFGFEEYDAPVLESEELYIRKAGEE- 104

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
                +F+     G  ++LR ++T  L R       +++ P + Y I   +R E    GR
Sbjct: 105 -ITDQMFNFVTKGGHRVTLRPEMTPSLVRLQLAKGRSLLLPAKWYSIPQCWRYEAISRGR 163

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q ++D VG  +  A+ E+       +E++G+   D  + +N+RK+L   L   G+
Sbjct: 164 RREHYQWNMDIVGVKSVAAEVELVCAACAAMESLGLTAQDVGVKVNSRKLLQCALAGAGV 223

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                      V   +DK++K   + ++  L +              L  +Q D ++  L
Sbjct: 224 PDS----LFAPVCVIVDKMEKLPEEQIRAELED------------LALDGQQADDIIRTL 267

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S+             K         +EL      ++  GY  + I+  +++VRGL YYTG
Sbjct: 268 SLRSVDDFD------KNLFDKNGALSELAEFFSQMQMYGYG-DWIQFDASVVRGLAYYTG 320

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+EA           +   F ++ GGGRYD L +     +              V ++ 
Sbjct: 321 IVFEAF---------DRSGEFRAIYGGGRYDNLFT--LYGSPQPISCVGFGFGDCVIIEL 369

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L+           V    +  +           + LR  G  A++ + S K       YA
Sbjct: 370 LKKKKLINSLPHKVDDVVIPFNESQRGTALKVLKQLRDKGRSADIIMDS-KKVAQTFSYA 428

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           DR     A++    E  +GM ++K L +G+    +  +   + +
Sbjct: 429 DRIGADRAVLIAPDETEKGMARVKMLREGQRGEDDRGDLVPFED 472


>gi|157413040|ref|YP_001483906.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157387615|gb|ABV50320.1| Histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 450

 Score =  210 bits (533), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 91/437 (20%), Positives = 168/437 (38%), Gaps = 52/437 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           RG  D    E+     +   +           I TP+LE ++   + + +  D  +K ++
Sbjct: 32  RGTVDLLPNELIKWQNVEKILLEQLSRASIKEIRTPILEMTELFVRGIGEGTDVVSKEMY 91

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           +  D   +  +LR + TA +AR + ++  +     + + +GP+FR E+   GR RQF Q 
Sbjct: 92  TFLDRGERSCTLRPEGTASVARALIQSGISSNPLQKLWYMGPMFRYERPQAGRQRQFHQL 151

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            V+ +G  +  +D E+  +  D L+ +GIK  +  I            +K  L+  +   
Sbjct: 152 GVEFIGHDSVRSDIEIIALAWDILDKLGIKELNLEINTLGNTNDRSNFQKSFLNWLEINK 211

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           + L     +D  ++     +++L  +                 E    + +FL       
Sbjct: 212 DSLD----LDSQNRITRNPLRILDSKNIQTKK---------ALENAPRLFNFL------- 251

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                     +    K +++L    E+++           +  +VRGL+YYT   +E   
Sbjct: 252 ----------SERSLKRYSDLKKQLEVLK------IPYVENFNLVRGLDYYTHTAFEIT- 294

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                          +V GGGRYD L+    G N PA GF+I     +  L  L      
Sbjct: 295 -------SGALGSQATVCGGGRYDDLIKHMGGPNTPAIGFAI----GLERLILLAGKELE 343

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +     + I      ++SL      ++ LR   +  E+ L S   F  Q K A++     
Sbjct: 344 VPRNTDIYIINQGLIAESL--AMDLSRKLRKHDLIVELDL-SGSTFSKQFKKANKLKSKS 400

Query: 432 AIIQGTGERSRGMLQIK 448
            I+ G  E ++    I+
Sbjct: 401 IIVIGDDEAAKREFLIR 417


>gi|261400173|ref|ZP_05986298.1| histidine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269210172|gb|EEZ76627.1| histidine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 431

 Score =  210 bits (533), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 99/497 (19%), Positives = 175/497 (35%), Gaps = 92/497 (18%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+           +     
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L +     D+            D   +     +++L  +            
Sbjct: 184 AHRAALVEYLTRYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +V +L    +        ++ G                          + 
Sbjct: 223 LQEICNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +  +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ 
Sbjct: 260 VENPRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M
Sbjct: 312 GFAMGIERLLLLVGEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-M 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                ++   Q+K AD      A+I    E + G + +KD+                 + 
Sbjct: 367 QHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------QG 409

Query: 470 RVAQITIPISELVSTVK 486
           +  Q T+  ++L  T++
Sbjct: 410 KHEQQTVAAADLTDTLQ 426


>gi|304387837|ref|ZP_07370011.1| histidine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338102|gb|EFM04238.1| histidine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 431

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 177/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVGEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                 + +  Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------QGKHEQ 413

Query: 474 ITIPISELVSTVK 486
            T+  ++L  T++
Sbjct: 414 QTVAAADLTDTLQ 426


>gi|299756871|ref|XP_002912267.1| histidine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|298411872|gb|EFI28773.1| histidine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 626

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 126/559 (22%), Positives = 218/559 (38%), Gaps = 108/559 (19%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK +L  +  +G  D    E+  R+ I   ++  +  +G   ++TP+ E  D L     +
Sbjct: 87  KKERLLLKTAKGTKDYNPAEMFCRDHIERIVKECFTTFGGACLDTPVFERKDVLTDKYGE 146

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH-- 120
           +   +K +F L+D  G+ ++LRYD T PLARY+A          + ++IG V+R +    
Sbjct: 147 D---SKLIFDLKDQGGEELALRYDHTVPLARYLAMQGGNNTQS-KIWQIGKVYRRDNPVM 202

Query: 121 GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
             GR R+F+Q D D          DAE+  M++  L  + +   ++ I +N+RKILDG+ 
Sbjct: 203 SKGRMREFMQADFDITGVWDPMIPDAEILSMISTALTRLDV--GEFTIKLNHRKILDGLF 260

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+  +    +   +  A+DKLDK     VK  + E              L     D 
Sbjct: 261 AVCGVPPE----KIRSISSAVDKLDKLPWSEVKREMTEE-----------KGLDEAIADR 305

Query: 240 MVSFLSIDLEKSMH----------ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           +  ++    + ++           +  E + G  + ++G  E+ ++   ++  G    R+
Sbjct: 306 IGEYVKHKAQGTLETTSLELLEWLKKDEKLTGNKSAKEGLEEVELLFRYLKAYGVLP-RV 364

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNE------------------------------- 318
               ++ RGL+YYTG +YE ++                                      
Sbjct: 365 SFDLSLARGLDYYTGVIYEVVVAASAPPGFNPADAFAESSSSTPAPAPPKKKANAVSTGN 424

Query: 319 ------KQKPVVFGSVGGGGRYDGLVSRF---------------------KGQNVPATGF 351
                  +  V  GS+  GGRYD LVS F                     K   VP  G 
Sbjct: 425 DDDPEIDESQVGVGSIAAGGRYDNLVSSFVAASAGISLNPTNAKEAKEAKKILQVPCVGI 484

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG+ R+   +               V++  M      L +     + LR +GI+ +   
Sbjct: 485 SIGMDRIFALVW--PKWEARGARAKEVMVYVMSAGDGLLEERIGLVKELRESGIKTDYLA 542

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK----DLAKGKELSREIKNNESWR 467
            S      Q    ++   P AII G  E   G++ +K    +L  GK++  E  +  +  
Sbjct: 543 KSKPKLPAQFAAGEKDYVPFAIILGGDELKEGLVTVKEQKWELRDGKKVKVEDADKGT-- 600

Query: 468 EARVAQITIPISELVSTVK 486
                   +   ELV+ +K
Sbjct: 601 -------KVRRDELVAYLK 612


>gi|146329531|ref|YP_001209428.1| histidyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146233001|gb|ABQ13979.1| histidyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 426

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 94/467 (20%), Positives = 179/467 (38%), Gaps = 55/467 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
             +  RG  D    E  +R +++D I +    +G+ P + PLLE +    + +  + D  
Sbjct: 5   NIQSIRGMRDILPPESDLREQLMDKIHHKLHQFGYLPADLPLLEKTALFQRTIGSETDVV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++  D   + ++LR + TA   R + E         R Y  G +FR E+   GR+R
Sbjct: 65  TKEMYTFLDRSEESVTLRPEATAGAVRAIIEQGRAQ-QVQRLYVEGAMFRYERPQKGRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V++ G  +   D E+  +  +  + +G+             ++   L  IGL  
Sbjct: 124 QFSQVSVESFGVKSAAQDVELIQLAYELFQELGLIS-----------LVRLELNTIGLPE 172

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLL-LGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
           + +L ++ +V    +   +      + L     R  +S D    A L  +    ++ +L 
Sbjct: 173 ERQLFQKDLVAYLQNHRQELDEDSQRRLETNPLRILDSKDPQVQACL--DAAPALLDYLG 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + ++   ++  L+                              +++  +VRGL+YY   
Sbjct: 231 SESQQHFEQVTTLLNAL-----------------------DIPWRLNPRLVRGLDYYCHT 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E                  +V  GGRYDGLV +  G   PA GF+ G+ R+++ L+  
Sbjct: 268 VFEWTT--------DALGAQSAVCAGGRYDGLVEQLGGAATPAAGFAFGVDRILLLLEQ- 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR--AEMFLGSSKNFGNQLKY 423
             +         + +        ++     +   LR       A +     ++  NQ K 
Sbjct: 319 --NAIWQARRPLIYMVIASFAEQAM--AMQWAAKLRQQ-FPDDAIVLHNDYQSLKNQFKK 373

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           AD+      ++ G  ER    +  KDL  G +         ++  A+
Sbjct: 374 ADKSGADFVLVFGEQERENQQVNCKDLQSGAQHCFGFDELVAYLTAQ 420


>gi|90994539|ref|YP_537029.1| histidine-tRNA synthetase [Porphyra yezoensis]
 gi|116242479|sp|Q1XDD9|SYH_PORYE RecName: Full=Histidyl-tRNA synthetase, chloroplastic; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|90819103|dbj|BAE92472.1| histidine tRNA synthetase [Porphyra yezoensis]
          Length = 430

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 96/459 (20%), Positives = 176/459 (38%), Gaps = 52/459 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RG  D    EI+    I + I  + E   +  I TP+ E S+   + + +  D  
Sbjct: 3   KIQAIRGTKDILPDEIQYWQFIHNKISKLLECANYQEIRTPIFENSELYDRGIGEDTDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGRF 125
           NK ++   D   + I+LR + TA + R   EN  +      R +  GP+FR E+   GR 
Sbjct: 63  NKEMYRFHDRSNRDITLRPEGTAGIVRSFIENKMSYHHSLQRLWYSGPMFRYERPQSGRQ 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  ++ +GS    AD+E+  +       + +      +    +     I     + 
Sbjct: 123 RQFHQLGIEFIGSLDARADSEVIHLAMSIFNNLNLHNLKLDLNSIGKVEDRSI---YQVK 179

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D L +    L   D   +     +++L  +                  +   +  FLS
Sbjct: 180 LRDYLTKYHDDLD-TDSQKRLTSNPIRILDSKDSNTQK---------ILTEAPKISDFLS 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           ++ ++   ++   +K                         +    I++ +VRGL+YY   
Sbjct: 230 LESQQHFGDVCNYLK-----------------------LLNIPYNINNKLVRGLDYYNDT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E                  ++ GGGRYD LV +  G+  PA G +IG+ RL++  K  
Sbjct: 267 AFEIKTLTSK--------GQDTICGGGRYDSLVHQLGGKATPAVGCAIGLERLLLIAKD- 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               N       +        + +        + L     + E+ + SS NF  Q+K A+
Sbjct: 318 ----NIDLPNKSIDFYIATQGTKANETGMQIMRFLHQQFFKIEIDVSSS-NFSKQIKQAN 372

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           ++     II G+ E + G++ IK L   K+ +  +   +
Sbjct: 373 KKRAVACIIIGSNEIAEGIITIKWLFSQKQENITVVQLK 411


>gi|58617455|ref|YP_196654.1| histidyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|75507481|sp|Q5FG57|SYH_EHRRG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|58417067|emb|CAI28180.1| Histidyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 414

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 100/456 (21%), Positives = 170/456 (37%), Gaps = 55/456 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +    RG  D    E+     I    + I   YGF P++TP++E+++   K     D   
Sbjct: 5   KLREVRGTKDLLDDELYRFQYIQHLAQTIASRYGFIPVDTPIIEFTEVFTKLGNTSDIVT 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++ +D  G+ I+LR + T+ + R +     TI    + +  GPVFR E+    R RQ
Sbjct: 65  KEMYNFKDKAGEDITLRPEFTSAIVRLLISKNLTIP--VKLFSSGPVFRYERPQKCRQRQ 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q + +  GS +  AD EM  +  + L  +  K +D      N       +    +H  
Sbjct: 123 FHQINFEFFGSDSPIADVEMISLCYNILSEL--KLSDRIKLEINFLGDQETINSYKIHLV 180

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           + LN+    L   D   +  +  +++L  +   D                  +  F + +
Sbjct: 181 EYLNKYQKDLS-EDSQRRLVVNPLRILDSKSPEDCKILL---------NAPSISDFYTQN 230

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +    E+ + +                          S    I+  IVRGL+YY   V+
Sbjct: 231 SQNFFKEVLDGLDNL-----------------------SINYVINHNIVRGLDYYCKTVF 267

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                  SV  GGRYDGLV    G + PA GF+ G+ RL   +     
Sbjct: 268 EFTTSE--------LGSQNSVIAGGRYDGLVKSMGGHSTPAIGFAAGVERLSALIDYEHK 319

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                       I  +    D+ S        LR  GI          +  N+L+ A+  
Sbjct: 320 KPKR--------IVLIPIGDDATSYAIKLAYELRCKGIHVCWNNYRGTSLKNELRKANDT 371

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +    +I G  E     +++KD+  G + +  + + 
Sbjct: 372 DI--VLIFGDEELQSNTVKVKDMKTGDQQNVAVCDL 405


>gi|56965072|ref|YP_176804.1| histidyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81678761|sp|Q5WCR7|SYH2_BACSK RecName: Full=Histidyl-tRNA synthetase 2; AltName:
           Full=Histidine--tRNA ligase 2; Short=HisRS 2
 gi|56911316|dbj|BAD65843.1| histidyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 425

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 120/461 (26%), Positives = 193/461 (41%), Gaps = 37/461 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D   ++  +R  +   +  +++ YG  P+ETP++ Y+D L    
Sbjct: 1   MKKWD---YQNVRGTQDYLPEDESVRVWLRRELEEVFQQYGCKPMETPMINYTDLLASKY 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  K +++L D   + ++LRYDLT P A+ +A N   I  P + Y IG VFR+   
Sbjct: 58  GGGAEIKKEMYTLTDRGKRALALRYDLTIPFAKVMAMN-PDIRKPFKRYEIGKVFRDGPI 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFR+F QCDVD  G  +  A+AE+  M  +    +G+   +  I  NNRK+L G+L+
Sbjct: 117 KAGRFREFTQCDVDVAGVDSPLAEAELLEMATEVFRRIGL---NMTIQYNNRKLLTGMLD 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  D    +   V+  +DK +K G + V   L E   D             + I  +
Sbjct: 174 ICGVSKD----QHSAVILILDKREKIGDKQVVNELKEMGVDG------------KAISKI 217

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             +L    +  + +       T    +G  EL  + E +R    +S +   +  + RGLE
Sbjct: 218 AQWLKQMSQSGIVDFATDRPTTPIMAEGIAELQELEEALRYLNIDS-QCTFNPFLARGLE 276

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
            YTG VYE  L    +          SVG GGRYD  +S   G+  P     I     I 
Sbjct: 277 IYTGTVYELFLTEGAI--------QSSVGSGGRYDQAISGLTGEEQPMPTVGISF--GID 326

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            + +       I +   +    +        +       LR  G R ++    +K     
Sbjct: 327 VIYTALKMEGRINQKPLLDYYVIPLQKQ--KEALAVASSLRKQGFRVDVEFK-NKKLTKA 383

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           L  A++   P  I+ G  E + G  ++K++  G E      
Sbjct: 384 LDRANKEKIPFVILIGEEEVASGRYKLKNMETGAEQHVPFS 424


>gi|187250797|ref|YP_001875279.1| histidyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|229558665|sp|B2KBC0|SYH_ELUMP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|186970957|gb|ACC97942.1| Histidyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 410

 Score =  209 bits (532), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 103/456 (22%), Positives = 175/456 (38%), Gaps = 59/456 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNK 68
           +L RGF D    E      +    R ++   G   +  P LE  +   K   D  D   K
Sbjct: 3   KLVRGFRDIFAPESNNFAELEACARRVFTLAGGTEVRIPTLELKELFIKSTGDTTDIVQK 62

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGRFRQ 127
            +++ +D  G+ +++R + T    R   EN      P  + + IG +FR E+   GR+R+
Sbjct: 63  EMYAFEDAGGRVLAMRPEGTPGTVRAYIENNFAQTAPVQKLFYIGNMFRAERPQAGRYRE 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G+ +  ADAE+ +M+ D + + G+K     I                    
Sbjct: 123 FEQIGMEYIGNPSPAADAEIILMIKDIVTSFGVKNYGVKINSLG---------------- 166

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                            +      K  L      +     +      E+  + V    ID
Sbjct: 167 ----------------CQECRPAYKQELINYLKKDFDTLCEKCKDRLEKNPLRVLDCKID 210

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             +         K     +K           V+          I  ++VRGL+YYT  V+
Sbjct: 211 GAR--------FKENAPKQKLCAACENHFNEVKTFLQGRIDYIIDPSLVRGLDYYTRTVF 262

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E   G              ++ GGGRYD LV    G ++PA GF++G+ R I A      
Sbjct: 263 EFQAGDS---------AQNAIAGGGRYDSLVKSMGGADMPAVGFAMGVERTIAA------ 307

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                K+     I  +  D +  +K      +LR+AG+  +  L   KN   Q+K ADR 
Sbjct: 308 -RGETKDNKQNKIFVVSLDKNCNAKAFEIMSLLRSAGVICDGGLF-DKNLKAQMKQADRT 365

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               A++ G  E  +G++ ++DL+ G++   +  + 
Sbjct: 366 KSSFALLLGADEFEKGVVTMRDLSSGEQQEIKFNDI 401


>gi|71892303|ref|YP_278037.1| histidyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|83305863|sp|Q492E1|SYH_BLOPB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71796409|gb|AAZ41160.1| histidyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 438

 Score =  209 bits (532), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 92/468 (19%), Positives = 176/468 (37%), Gaps = 49/468 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K   +  RG  D   K+  +   I + +  I ++YG+  I  P++E ++   + +
Sbjct: 1   MLKYDK-NIQSVRGMHDYLPKDTILWQYIENILITILDSYGYKEIRFPIIEDTNLFKRSI 59

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + T+   R   ++        R + +GP+FR E+
Sbjct: 60  GEVTDVIEKEMYNFTDRNGNNLTLRPEGTSGCVRAGIKHGLFYHQEQRLWYLGPMFRYER 119

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q   +  G      DAE+ ++ A   + +GI              L   L
Sbjct: 120 PQKGRYRQFHQFSAEAFGQIGPDIDAELILITARCWKKLGI-----------NHHLSLEL 168

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             IG         + ++      L       ++ L            TK   L      I
Sbjct: 169 NSIGSLSSRINYRKKLITFLEKNLSNLDSNALRRLYSNPLRILDTKNTKTKELLLN-API 227

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +L  D      EL +L+                              +++  +VRGL
Sbjct: 228 LSDYLDDDSRVHFSELCQLL-----------------------NLLGVPYRVNPYLVRGL 264

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +             V  ++  GGRYD LV    G + PA GFSIG+ R+I
Sbjct: 265 DYYNKTVFEWVT--------DSLGVKKTICAGGRYDELVQELGGYSAPAIGFSIGLERVI 316

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + ++ + + +   K    + +  +    +S     + ++ +R+    +R  +  G   + 
Sbjct: 317 LLIQEINNISILHKN-IYIDVYFISIGDNSRKHAMLLSENIRSTLPSLRLMVHHGGD-DI 374

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             Q   A++    + +I          + +K+L    +   +      
Sbjct: 375 KKQFYCANKHKPQIVLIMNEKNALDKTIILKNLQSKTQEILKHDAVSE 422


>gi|146093598|ref|XP_001466910.1| histidyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134071274|emb|CAM69959.1| putative histidyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|322501010|emb|CBZ36087.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 473

 Score =  209 bits (532), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 102/465 (21%), Positives = 194/465 (41%), Gaps = 39/465 (8%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
             +  E  +G  D P +++R+R  +     +    +GF+  + P+LE  +   +   +E 
Sbjct: 46  NMIEKEPVQGCRDFPPEDMRVRRHLFGVFHDTARRFGFEEYDAPVLESEELYIRKAGEE- 104

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              + +F+     G  ++LR ++T  L R       +++ P + Y I   +R E    GR
Sbjct: 105 -ITEQMFNFVTKGGHRVTLRPEMTPSLVRLQLAKGRSLLLPAKWYSIPQCWRYEAISRGR 163

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q ++D VG  +  A+ E+       +E++G+   D  + +N+RK+L   L   G+
Sbjct: 164 RREHYQWNMDIVGVKSVAAEVELVCAACAAMESLGLTAQDVGVKVNSRKLLQCALAGAGV 223

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                      V   +DK++K   + ++  L +              L  +Q D ++  L
Sbjct: 224 PDS----LFAPVCVIVDKMEKLPEEQIRAELKD------------LALDGQQADDIIKTL 267

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S+       +      G ++      EL      ++  GY  + I+  +++VRGL YYTG
Sbjct: 268 SLRSVDDFDKDLFDKNGALS------ELAEFFSQMQMYGYG-DWIQFDASVVRGLAYYTG 320

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALK 363
            V+EA           +   F ++ GGGRYD L + +   Q V   GF  G   ++  LK
Sbjct: 321 IVFEAF---------DRSGEFRAICGGGRYDNLFTLYGSPQPVSCVGFGFGDCVIVELLK 371

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             +   +   ++  V    +  +           + LR  G  A++ + S K       Y
Sbjct: 372 KKKLINSLPHKVDDV---VIPFNESQRGTALKVLKQLRDKGRSADIIMDS-KKVAQTFSY 427

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ADR     A++    E  +GM ++K L +G+    +  +   + +
Sbjct: 428 ADRIGADRAVLIAPDETEKGMARVKMLREGQRGEDDRGDPVPFED 472


>gi|145590899|ref|YP_001152901.1| histidyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166228601|sp|A4WIN2|SYH_PYRAR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|145282667|gb|ABP50249.1| histidyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 419

 Score =  209 bits (532), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 124/456 (27%), Positives = 211/456 (46%), Gaps = 46/456 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
              RG  D   +++    R+ + + ++ E YG+  +ETP++E+ + L K    E      
Sbjct: 10  RPVRGMRDWMPQQLYALRRMEEVLSSVAEQYGYRRVETPVVEHFEVLAKKAGQE--VINE 67

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D  G+ + LR+D+T P+AR V      +  P R Y    VFR ++   GR+R+F 
Sbjct: 68  IYYFRDKAGRELGLRFDMTVPIAR-VLSYNLDLPRPVRWYYFSKVFRYDEPQHGRYREFF 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+ +GS++  ADAE+  ++A +LEA G  +  Y I IN+R+ +D +LE +G      
Sbjct: 127 QFGVELIGSASPRADAEVVQLLAASLEAAGASK--YVIRINDRRAVDKLLESLGA----- 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           L+ R  V RA+DK  K   + V  ++  G             L  +  + +    S    
Sbjct: 180 LSHRDAVYRALDKKLKLPREEVIGIMTSG------------GLPRDAAEKIYDTASEMSL 227

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
               E+   + G +   + + + V   E    +     R K   +IVRGL+YYTG V+EA
Sbjct: 228 DEAVEVLRRLDGRLG--EAYAKFVKYLE----AAVPLERFKFDMSIVRGLDYYTGVVFEA 281

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +G   +          +VGGGGRYD L+  + G  +PA GF+IG+ R    ++++   +
Sbjct: 282 FVGDYWL----------AVGGGGRYDDLLELYSGVKIPALGFAIGVER---LMEAVGLQS 328

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   + I     D D+          LR  G    + LG  KN  +  +Y  +   
Sbjct: 329 VEKPLDYYIYIF----DDDAYKHAVALANRLRKQGHSVVVELGE-KNLKDVFEYVLKIGT 383

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              ++ G  E  +G+++I+DL K  E+   +    S
Sbjct: 384 RYLVLIGRKELEKGVVKIRDLQKRGEVEVPLSALLS 419


>gi|261379853|ref|ZP_05984426.1| histidine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797549|gb|EFC52896.1| histidine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 431

 Score =  209 bits (532), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 96/475 (20%), Positives = 169/475 (35%), Gaps = 76/475 (16%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+           +     
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L +     D+            D   +     +++L  +            
Sbjct: 184 AHRAALVEYLTRYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +V +L    +        ++ G                          + 
Sbjct: 223 LQEICNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +  +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ 
Sbjct: 260 IENPRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M
Sbjct: 312 GFAMGIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-M 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNN 463
                ++   Q+K AD      A+I    E + G + +KD+  K ++ +    + 
Sbjct: 367 QHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDMQGKHEQQTVAAADL 421


>gi|241758676|ref|ZP_04756790.1| histidine--tRNA ligase [Neisseria flavescens SK114]
 gi|241321187|gb|EER57383.1| histidine--tRNA ligase [Neisseria flavescens SK114]
          Length = 458

 Score =  209 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 99/497 (19%), Positives = 174/497 (35%), Gaps = 92/497 (18%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 31  KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYQQIRTPIVEQTGLFVRSI 90

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 91  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 150

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+           +     
Sbjct: 151 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 210

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L +     D+            D   +     +++L  +            
Sbjct: 211 AHRAALVEYLIRYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PD 249

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +V +L    +        ++ G                          + 
Sbjct: 250 LQEICNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQY 286

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +  +VRGL+YY   V+E            K     +V GGGRYDGL+    G   P+ 
Sbjct: 287 IENPRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGNPAPSI 338

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M
Sbjct: 339 GFAMGIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-M 393

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                ++   Q+K AD      A+I    E + G + +KD+                 + 
Sbjct: 394 QHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------QG 436

Query: 470 RVAQITIPISELVSTVK 486
           +  Q T+  ++L  T++
Sbjct: 437 KHEQQTVAAADLTDTLQ 453


>gi|319410211|emb|CBY90550.1| histidyl-tRNA synthetase (histidine-tRNA ligase; HisRS) [Neisseria
           meningitidis WUE 2594]
          Length = 431

 Score =  209 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 176/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRTYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNFLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+  ++L +T++
Sbjct: 414 QTVAAADLTNTLQ 426


>gi|221194874|ref|ZP_03567931.1| histidyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185778|gb|EEE18168.1| histidyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 437

 Score =  209 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 100/500 (20%), Positives = 183/500 (36%), Gaps = 84/500 (16%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNK 68
           +  +G  D     +R   R+ D  R+++  YGFD IETP +E  D+    + +  D   K
Sbjct: 3   QRIQGTEDLYGGYMRSWERMQDIARHLFGTYGFDRIETPAIEQVDTFVHGIGESTDVVRK 62

Query: 69  GVFSL------QD----------DDGQWISLRYDLTAPLARYVAENF--DTIVFPCRTYR 110
            +F +      +D             Q +++R + TA + R   E+        P + + 
Sbjct: 63  EMFRVFSGALMEDLLASGSEAGLKPRQRMAMRPEGTAGVVRAAVEHNFVPQGAAPAKMWY 122

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
              +FR E+   GR RQF Q  V+ +G+S   ADAE  +M+    + +G   +   + IN
Sbjct: 123 AEAMFRGERPQKGRLRQFHQVGVEWLGASDPAADAESIIMLMQFFKELGFDTSRLKLMIN 182

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           +    +            +           D +++  +  ++    + + ++     K A
Sbjct: 183 SMGDAEC--RPAYREKVKQFILDHADRMCDDCIERAEINPLRAF--DCKNESCQAVMKDA 238

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L S+        L  D      ++   +                               
Sbjct: 239 PLISDN-------LCDDCRAHYEQVKAYLDAAGIA-----------------------YV 268

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              T+VRGL+YYT  V+E       +               GRYDGL+    G+  P  G
Sbjct: 269 EDPTLVRGLDYYTRTVFEVEALDAGIGAIGGG---------GRYDGLMELEGGKPTPGVG 319

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F++G  R+++AL +            P  +      ++   +       LR AGIR E  
Sbjct: 320 FAVGFERIMLALAAQGI---ETDIAAPCCVYVATTSAEEAREAFSVVLALRGAGIRTE-A 375

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             + ++   Q K AD+    L ++ G  E + G+  ++D+   +++              
Sbjct: 376 DRTGRSLKAQFKQADKLGAKLCVVLGPDEVAAGVATLRDMTTHEQI-------------- 421

Query: 471 VAQITIPISELVSTVKKILQ 490
                +P   LV  V++ L 
Sbjct: 422 ----QVPADRLVEEVRQRLA 437


>gi|1333826|emb|CAA78919.1| histidine--tRNA ligase [Streptococcus dysgalactiae subsp.
           equisimilis]
          Length = 407

 Score =  209 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 92/452 (20%), Positives = 166/452 (36%), Gaps = 52/452 (11%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGVFSLQDDDGQWISLR 84
              +    R  ++ Y +  I TP+ E+ + + + + D  D   K ++   D   + I+LR
Sbjct: 1   WQYVEGVARETFKQYHYGEIRTPMFEHYEVISRSVGDTTDIVTKEMYDFYDKGDRHITLR 60

Query: 85  YDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
            + TAP+ R   EN      +  P + Y IG +FR E+   GR R+F Q  V+  GS+  
Sbjct: 61  PEGTAPVVRSYVENKLFAPEVQKPVKLYYIGSMFRYERPQAGRLREFHQIGVECFGSANP 120

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
             D E   M     E +GIK    H+             +  +     + + L    + D
Sbjct: 121 ATDVETIAMAYHLFERLGIKGVTLHLNSLGNAASRAAYRQALIDYLSPMRDTL----SKD 176

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
              +     +++L  + + D          +       ++ +   + +     +  +++ 
Sbjct: 177 SQRRLDENPLRVLDSKEKEDK---------IAVANAPSILDYQDEESQAHFDAVRSMLEA 227

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                                   +    I + +VRGL+YY   ++E I           
Sbjct: 228 L-----------------------AIPYVIDTNMVRGLDYYNHTIFEFITEVDQSE---- 260

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                ++  GGRYDGLV  F G   P  GF +G+ RL++ L         ++E   V I 
Sbjct: 261 ----LTICAGGRYDGLVEYFGGPATPGFGFGLGLERLLLILDKQGV-ELPVEEGLDVYIA 315

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +  D++        TQ +R  G   E      +    Q K AD     + I  G  E  
Sbjct: 316 VLGADANV--AALALTQAIRRQGFTVERDY-LGRKIKAQFKSADTFKAKVVITLGESEIK 372

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            G   +K     +E++      ++   +  A+
Sbjct: 373 AGQAVLKHNQTRQEMTVSFDQIQTDFASIFAE 404


>gi|51598399|ref|YP_072587.1| histidyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81691584|sp|Q662M6|SYH_BORGA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|51572970|gb|AAU06995.1| histidyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 456

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 119/473 (25%), Positives = 202/473 (42%), Gaps = 48/473 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I ++  +Y FD I+TP+LEYS+ L K     D  
Sbjct: 1   MDVKTLKGFKDYLPKDSLIRIHIVKQIFSVLNSYNFDLIDTPVLEYSELLLKKSG--DES 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D  G+ +S+R+DLT P AR+VA N   + FP R  + G VFR E    GR+R
Sbjct: 59  EKQIYRFKDHGGRDVSMRFDLTIPFARFVATNISDLKFPFRRSQFGKVFRGENSQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA-----VGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG     ADAE+  ++   LE      +      + I  ++  IL+   EK
Sbjct: 119 EFMQFDFDIVGEDGFRADAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHLGILNSFFEK 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +G+  +      + +LR IDK+DK G+  VK  L                +  E +D ++
Sbjct: 179 LGIKEES-----IFILRNIDKIDKIGIDKVKEAL-------------LLKIEKEAVDSIL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           S +++  + +  +  + +K  +   +    +  +   +       +   ++  I  GL+Y
Sbjct: 221 SLVNL--QGAFKDKIQALKSILGDNESVKRVEDVYRHLSLLKI-QDSFNLNLKISGGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI-- 359
           YTG V+E+ +              GSV  GGRYD LVS +       +G           
Sbjct: 278 YTGIVFESEVFGS---------NMGSVCSGGRYDNLVSSYSSSIQKVSGVGGSFGVDRIK 328

Query: 360 -VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL- 411
            +      S            +  ++ DS   + Y       R         I  E++  
Sbjct: 329 DIIDLEQFSYIKIFVTKARSKVLIVNLDSALQNYYYELATRFRNHDYSKVKNISCEVYFK 388

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             + KN   Q++YA  +     +  G  E     ++++DL K +EL    +  
Sbjct: 389 NKNGKNIKEQIEYALNKEIRFLVFVGQEEYKENKIKVRDLTKKEELLLSFEEV 441


>gi|72161163|ref|YP_288820.1| histidyl-tRNA synthetase [Thermobifida fusca YX]
 gi|83305881|sp|Q47RX0|SYH_THEFY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71914895|gb|AAZ54797.1| histidyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 438

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 127/475 (26%), Positives = 211/475 (44%), Gaps = 48/475 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M ++  +R     GF +   +   +  R LD IR  +E YGF  +ETP +E  D L    
Sbjct: 1   MSEQRIIRPTPISGFPEWTPRIRSVELRWLDHIRRGFERYGFSSVETPSVEVLDVLLSKG 60

Query: 61  PDEDRPNKGVFSLQ-------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
                 ++ +++LQ       D     + L +DLT P ARYVA++F+ +VFP + Y+I  
Sbjct: 61  E----TSQEIYTLQRLQADADDSSDARLGLHFDLTVPFARYVAQHFNDLVFPFKRYQIQR 116

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GRFR+F QCD+D +         +  +         G+    + + INNRK
Sbjct: 117 VWRGERPQEGRFREFTQCDIDVINVDRIPLHFDAELPRIVHEVLTGLDIPAWTLNINNRK 176

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L G  E +G+       + L V+RA+DKL K G   V+ +L +            A L+
Sbjct: 177 VLQGFYEGLGI------TDPLAVIRAVDKLHKIGADAVREILID-----------QAGLS 219

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           S+Q    +    I    +  +  + +L         G +EL  + + +      S  +  
Sbjct: 220 SDQAAACLELAEIRGSDTTVVDAVAKLGVSHPTLTAGLDELGEVLDELSD--LPSGSVVA 277

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             +I RGL+YYTG VYEA               +GS+  GGRY+ L  +F  +++P  G 
Sbjct: 278 DLSIARGLDYYTGTVYEATFNDD--------PGYGSICAGGRYENLAGQFIRRSLPGVGI 329

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG++R+   L S            P  +  +    +  S        LR  G   E++ 
Sbjct: 330 SIGLTRIFAKLVSEGR--ITGGRFCPTDVLVVLPSDERRSAALAVAAQLRERGFNTEVYH 387

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            ++K  G Q++YA +++ P        +     +  K+LA G+++     +  SW
Sbjct: 388 QAAK-IGKQIQYAVKKDIPFVWFPPFDDGRPHEV--KNLATGEQVE---ADPASW 436


>gi|195941872|ref|ZP_03087254.1| histidyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|195942402|ref|ZP_03087784.1| histidyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|216264454|ref|ZP_03436446.1| histidyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218249602|ref|YP_002374663.1| histidyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|221217401|ref|ZP_03588872.1| histidyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223889220|ref|ZP_03623809.1| histidyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224532794|ref|ZP_03673410.1| histidine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224533991|ref|ZP_03674575.1| histidyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225549841|ref|ZP_03770803.1| histidyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|226320673|ref|ZP_03796231.1| histidyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226321954|ref|ZP_03797479.1| histidyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226737065|sp|B7J168|SYH_BORBZ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|215980927|gb|EEC21734.1| histidyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218164790|gb|ACK74851.1| histidyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|221192679|gb|EEE18895.1| histidyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223885469|gb|EEF56570.1| histidyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224512282|gb|EEF82667.1| histidine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512827|gb|EEF83194.1| histidyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225369532|gb|EEG98983.1| histidyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|226232544|gb|EEH31298.1| histidyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226233889|gb|EEH32612.1| histidyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|312149424|gb|ADQ29495.1| histidyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 456

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 122/472 (25%), Positives = 202/472 (42%), Gaps = 48/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I ++  +Y FD I+TP+LEYSD L K     D  
Sbjct: 1   MDIKTLKGFKDYLPKDSLIRIHIVRQIFSVLNSYNFDLIDTPVLEYSDLLLKKSG--DET 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+ G+ +S+R+DLT P AR+VA N   +  P R  + G VFR E    GR+R
Sbjct: 59  EKQIYRFKDNGGRDVSMRFDLTVPFARFVATNISALKLPFRRSQFGKVFRGENSQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA-----VGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG      DAE+  ++   LE      +      + I  ++  IL+   EK
Sbjct: 119 EFMQFDFDIVGEDTFRGDAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHIGILNSFFEK 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +GL         + +LR IDK+DK G+  VK  L                +  E +D ++
Sbjct: 179 LGLKEKS-----IFILRNIDKIDKIGIDKVKEAL-------------LLEIEKEAVDSIL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           S +S+  + +  +  + +K  +   +    +  + + +       +   ++  I RGL+Y
Sbjct: 221 SLVSL--QGTFKDKIQALKSILGDNESIKRVEDVFQHLSLLKI-QDSFNLNLKISRGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI-- 359
           YTG V+E+ +              GSV  GGRYD LVS F       +G           
Sbjct: 278 YTGIVFESEVFGS---------NMGSVCSGGRYDNLVSSFSNSIQKISGVGGSFGVDRIK 328

Query: 360 -VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL- 411
            +      S            +  ++ DS   + Y       R         I  E++  
Sbjct: 329 DIIDLEKFSYIKIFVTKARSKVLIVNLDSALQNYYYELATRFRNHDYSKVKNISCEVYFK 388

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             + KN   Q++YA  +     +  G  E     ++++DL K +EL    + 
Sbjct: 389 NKNGKNIKEQIEYALSKEIRFLVFVGQEEYKENKMKVRDLTKKEELLLSFEE 440


>gi|58584669|ref|YP_198242.1| histidyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|75507974|sp|Q5GSM4|SYH_WOLTR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|58418985|gb|AAW71000.1| Histidyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 413

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 101/469 (21%), Positives = 169/469 (36%), Gaps = 74/469 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +  +  RG  D    E      I      I   YGF P +TP+ EY++   K L D  D 
Sbjct: 1   MTNQTVRGTKDLLFDEWYRFKYIQQIANRISSLYGFLPAQTPIFEYTEVFMKTLGDGSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            NK +++  D  G+ I+LR + TA + R + E    I    + +  GP FR E+   GR 
Sbjct: 61  INKEMYTFYDKGGKSITLRPEFTAAIVRLLVEKKLQIP--IKLFSTGPAFRYERPQKGRQ 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q + +  G     AD E+  +    L    I +          D       +++L 
Sbjct: 119 RQFHQINFEVFGVENPKADIELISLAHHLLTEFNISKNVRLEINSLGDSETIAKYKEVLI 178

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
              +K      +            D  ++     +++L  +   D          L    
Sbjct: 179 PYFKKFQNDLSE------------DSQNRLTKNPLRILDSKDEKDK---------LIISD 217

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +  + + +      ++   +                          +    ++S +V
Sbjct: 218 APKISDYYTRESSDFFEQILNGLTAL-----------------------NIPCTVNSKLV 254

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E ++        +     G+V  GGRYD LVS   G+  PA GF+ GI 
Sbjct: 255 RGLDYYCHTVFEFVI--------EDFGAQGAVFAGGRYDNLVSSVGGKYTPAIGFAGGIE 306

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R++  +        N    G   I  +    ++          LR  G+        +  
Sbjct: 307 RIMELI--------NYSMKGDRPICLVPIGREAEEHALTLANELRRNGLYVIYEYNGA-- 356

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             N++K A + N   A+I G  E     L+IK++  G+E      N   
Sbjct: 357 LKNRMKKASQANAKAALIFGNEELGSKTLKIKNMDTGEEKIIAYGNIME 405


>gi|15676750|ref|NP_273895.1| histidyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|32130149|sp|Q9JZX9|SYH_NEIMB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|7226090|gb|AAF41265.1| histidyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316984261|gb|EFV63237.1| histidyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140001|gb|EGC62530.1| histidyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200469|gb|ADY95924.1| histidyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 431

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 174/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPT-------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D                    D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVKQKDFKLTAAFWQAFEDTVGRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L  D +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEDSQNHYVRFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 414 QTVAAEDLTPTLQ 426


>gi|58265480|ref|XP_569896.1| histidine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134108947|ref|XP_776588.1| hypothetical protein CNBC0810 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259268|gb|EAL21941.1| hypothetical protein CNBC0810 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226128|gb|AAW42589.1| histidine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 586

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 121/531 (22%), Positives = 208/531 (39%), Gaps = 85/531 (16%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           + P+G  D   +   +R +I  ++  I+  +    I+TP+ E  + L     ++   +K 
Sbjct: 91  KTPKGTLDHKPEAALLRKKIFSTLEGIFLKHDASTIDTPVFELKEILAGKYGED---SKL 147

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPGRFRQ 127
           ++ L D  G+  SLRYDLT P ARYVA N    +   R Y IG V+R ++     GR R+
Sbjct: 148 IYDLADQGGELCSLRYDLTVPFARYVAMNG---ISSIRRYHIGKVYRRDQPVMTKGRMRE 204

Query: 128 FIQCDVDNVG-SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           F QCD D  G       D+E+  ++ + L ++     +Y + IN+RKILDGI +  G+  
Sbjct: 205 FYQCDFDIAGPCDPMVYDSEVLRVLCEALTSLD--IGEYTVKINHRKILDGIFQLAGVPA 262

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +    +   +  A+DKLDK     VK            + T    L     D +  ++ +
Sbjct: 263 E----KTRPISSAVDKLDKLPWADVKK-----------EMTVEKGLDEAVADKIGEYVGL 307

Query: 247 DLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                      +  E +      ++G  ++ ++   ++      N++    ++ RGL+YY
Sbjct: 308 KGPGLEVLQKLQSDEALMSIPLAKQGLADMEILFRYLKVYNVL-NKMSFDMSLARGLDYY 366

Query: 303 TGCVYEAILGFPVMNE------------------------------------KQKPVVFG 326
           TG +YEAI                                             +  V  G
Sbjct: 367 TGIIYEAIHESSAPPSLKTIPSVPAPSSISTNTPSSKPKPSKSAATTNEDGIDESTVGVG 426

Query: 327 SVGGGGRYDGLVSRFKG------QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
           S+  GGRYD LV  F        + VP  G S+G+ R+   ++                +
Sbjct: 427 SIAAGGRYDNLVGMFAEATGRKAEQVPCVGVSVGVERVYSIMEMRRRKGEEKVRGKETEV 486

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +      L K   +  ML  AGI+       +     Q K AD    P   I    E 
Sbjct: 487 FVLGLGGVELEKRMEFATMLWDAGIKTSFSPKVNPKAPAQWKQADDDAIPYVAILAPKEL 546

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           + G ++IK     +++ ++                + I ++V+ +K+ L  
Sbjct: 547 AAGTVRIK-----EQVGKDAA-------GDAKGEEVKIEDVVAYLKEKLGR 585


>gi|88607924|ref|YP_504747.1| histidyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|123763830|sp|Q2GLK4|SYH_ANAPZ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|88598987|gb|ABD44457.1| histidyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 420

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 104/478 (21%), Positives = 175/478 (36%), Gaps = 76/478 (15%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D  ++E      I +  + I E +GF P++TP+ E+ +   K L D  D   
Sbjct: 6   FQPVRGTKDLLSEEYYKLFHIQNVAQEIGERFGFMPVQTPIFEFQEVFCKTLGDSTDVIG 65

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++  D  G  ++LR + TA + R +           R +  GPVFR E+    R RQ
Sbjct: 66  KEMYTFADRGGDVLALRPEFTAAIVRLLLSEKMQPP--ARLFTAGPVFRYERPQKCRQRQ 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDGI 178
           F Q + +  G+    ADAE+  +    LE  G+                    R  L   
Sbjct: 124 FHQINYECFGAGGSQADAEIISLAYCVLEVFGLHCDVTLEINSLGSSECMNAYRASLLSF 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            EK      +            D   +     +++L  +  TD                 
Sbjct: 184 FEKYRSELSE------------DSRRRLQTNPLRILDSKDATDKE---------ILSTAP 222

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  F   +   S   L + +            L                       VRG
Sbjct: 223 SIEDFYDAETRASFEGLKDHLTNLGIPYAVNRRL-----------------------VRG 259

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG V+E         +        ++  GGRYD LV+   G+NVPA GF+ G+ RL
Sbjct: 260 LDYYTGTVFE--------YKTSSLGAQDAIIAGGRYDNLVAAMGGENVPAIGFAGGVERL 311

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKN 416
              +        +        +  +    + +S     T  +R   +G++    + +   
Sbjct: 312 AALM--------SYSRTRKFCVFILPISEEVVSHAMRITYEIRRTLSGVQVICDIVTR-- 361

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
               +K ADR+   +A+I G  E +R  +  K++  GK+    I N   + +A +A+ 
Sbjct: 362 LKTGIKRADRQKADIALILGDEEVNRNAVSCKNMLTGKQEEISISNITEYLKAMMAER 419


>gi|312148288|gb|ADQ30947.1| histidyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 456

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 122/472 (25%), Positives = 202/472 (42%), Gaps = 48/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I ++  +Y FD I+TP+LEYSD L K     D  
Sbjct: 1   MDIKTLKGFKDYLPKDSLIRIHIVRQIFSVLNSYNFDLIDTPVLEYSDLLLKKSG--DET 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+ G+ +S+R+DLT P AR+VA N   +  P R  + G VFR E    GR+R
Sbjct: 59  EKQIYRFKDNGGRDVSMRFDLTVPFARFVATNISALKLPFRRSQFGKVFRGENSQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA-----VGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG      DAE+  ++   LE      +      + I  ++  IL+   EK
Sbjct: 119 EFMQFDFDIVGEDTFRGDAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHIGILNSFFEK 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +GL         + +LR IDK+DK G+  VK  L                +  E +D ++
Sbjct: 179 LGLKEKS-----IFILRNIDKIDKIGIDKVKEAL-------------LLEIEKEAVDSIL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           S +S+  + +  +  + +K  +   +    +  + + +       +   ++  I RGL+Y
Sbjct: 221 SLVSL--QGAFKDKIQALKSILGDNESIKRVEDVFQHLSLLKI-QDSFNLNLKISRGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI-- 359
           YTG V+E+ +              GSV  GGRYD LVS F       +G           
Sbjct: 278 YTGIVFESEVFGS---------NMGSVCSGGRYDNLVSSFSNSIQKISGVGGSFGVDRIK 328

Query: 360 -VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL- 411
            +      S            +  ++ DS   + Y       R         I  E++  
Sbjct: 329 DIIDLEKFSYIKIFVTKARSKVLIVNLDSALQNYYYELATRFRNHDYSKVKNISCEVYFK 388

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             + KN   Q++YA  +     +  G  E     ++++DL K +EL    + 
Sbjct: 389 NKNGKNIKEQIEYALSKEIRFLVFVGQEEYKENKMKVRDLTKKEELLLSFEE 440


>gi|260583248|ref|ZP_05851025.1| histidyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260093701|gb|EEW77612.1| histidyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 418

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 90/461 (19%), Positives = 171/461 (37%), Gaps = 53/461 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  +G  D    E          I +  + YG++ I TP++E ++   + + +  D  
Sbjct: 4   KYQSIKGMKDVLPNESPKWIFFERIIIDWMKKYGYEQIRTPIIENTNLFIRSIGESTDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +   ++LR + T    R   EN        R + +GP+FR+EK   GR+
Sbjct: 64  EKEMYSFVDSLNKDKLTLRPEGTVACLRACLENNLLYNSTQRLWYMGPMFRHEKPQKGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  ++ +G      DAEM  M  D    +G K  +  +              I + 
Sbjct: 124 RQFTQVGIEALGLEGPDIDAEMITMTKDLWNQLGFKNIELQVNTLGTVAERAKYRNILIK 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +   + L      D   +     +++L  + ++                   ++ +L 
Sbjct: 184 YLEDNIDVLD----EDGRRRLYSNPLRVLDSKNKSMQD---------ICNNAPKLIEYLG 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D                        L      +            ++ +VRGL+YY   
Sbjct: 231 KDS-----------------------LCHYYTWLNFLEKLGISYVENTRLVRGLDYYNNS 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +                +   GGRY+GL+    G++    GF++G+ R++  L + 
Sbjct: 268 VFEWV--------SYANESPLTFCAGGRYNGLMEELGGESKAGIGFAMGVERVLDMLDTK 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               NN       LI  +   +++     +  Q LR  G   +       +  +QLK AD
Sbjct: 320 VIPENNN------LIYIVHFGNNTDEYGLLIAQKLRNIGFNVKQDF-EHTSIKSQLKRAD 372

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           + N   +II G  E     +++K++    E+  ++ N   +
Sbjct: 373 KYNARFSIIIGENEVYLNKVKVKEMKSRNEVLIDLNNLIDF 413


>gi|254673333|emb|CBA08521.1| Histidyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325132267|gb|EGC54960.1| histidyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325137762|gb|EGC60337.1| histidyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325206315|gb|ADZ01768.1| histidyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 431

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 174/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGERADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 414 QTVAAEDLTHTLQ 426


>gi|319775491|ref|YP_004137979.1| Histidyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|319897897|ref|YP_004136094.1| histidyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|329122470|ref|ZP_08251056.1| histidine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317433403|emb|CBY81783.1| Histidyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317450082|emb|CBY86296.1| Histidyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327473224|gb|EGF18645.1| histidine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 418

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 95/465 (20%), Positives = 173/465 (37%), Gaps = 61/465 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  +G  D    E          I    + YG++ I TP++E ++   + + +  D  
Sbjct: 4   KYQSIKGMKDVLPSESPKWIFFERIIIEWMKKYGYEQIRTPIIENTNLFIRSIGEATDIV 63

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++S  D  +   ++LR + T    R   EN        R + +GP+FR+EK   GR+
Sbjct: 64  EKEMYSFVDSLNKDKLTLRPEGTVACLRACLENNLLYNSTQRLWYMGPMFRHEKPQKGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGILEK 181
           RQF Q  ++ +G      DAEM  M  D    +G K  +  +        R     IL K
Sbjct: 124 RQFTQVGIEALGLEGPDIDAEMITMTKDLWNQLGFKNIELQVNTLGTVAERVKYRNILIK 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D L+E        D   +     +++L  + ++                   ++
Sbjct: 184 YLEDNIDVLDE--------DGRRRLYSNPLRVLDSKNKSMQD---------ICNNAPKLI 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +L  D                        L      +            ++ +VRGL+Y
Sbjct: 227 EYLGKDS-----------------------LCHYYTWLNFLEKLGISYVENTRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +                +   GGRY+GL+    G++    GF++G+ R++  
Sbjct: 264 YNNSVFEWV--------SYANESPLTFCAGGRYNGLMEELGGESKAGIGFAMGVERVLDM 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L +     NN       LI  +   +++     +  Q LR  G   +       +  +QL
Sbjct: 316 LDTKVIPENNN------LIYIVHFGNNTDEYGLLIAQKLRNIGFNVKQDF-EHSSIKSQL 368

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           K AD+ N   +II G  E     +++K++    E+  ++ N   +
Sbjct: 369 KRADKYNARFSIIIGENEVYLNKVKVKEMKSRNEVLIDLNNLIDF 413


>gi|33861180|ref|NP_892741.1| histidyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|39932079|sp|Q7V263|SYH_PROMP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|33639912|emb|CAE19082.1| Histidyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 429

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 100/468 (21%), Positives = 177/468 (37%), Gaps = 61/468 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     L     RG  D    ++     +   I           I TP+LE ++   + +
Sbjct: 1   MNNFKNL-----RGTVDLLPDQLIKWQNVEKIIIQQLFRSSVKEIRTPILEMTELFMRGI 55

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K +++  D   +  +LR + TA +AR + ++  +     + + +GP+FR E+
Sbjct: 56  GEGTDVVSKEMYTFLDRGERSCTLRPEGTASVARALIQHGISTRPSQKLWYMGPMFRYER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR RQF Q  V+ +G  +  +D E+  +  D L+ +GIK  +  I      I     
Sbjct: 116 PQAGRQRQFHQLGVEFIGYESVNSDIEIITLAWDILQKLGIKELNLEINTLGDHIDRSNF 175

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +K  L    K  E       +D   +     +++L  +                 +    
Sbjct: 176 QKAFL----KWLEVNKNSLDLDSQRRIDKNPLRILDTKNVQTKQ---------ILKGAPR 222

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  FLS    +    + E +K                               +  +VRGL
Sbjct: 223 LFDFLSEKSLERYLIIKEKLK-----------------------LLKIPFIENFNLVRGL 259

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYT   +E                  +V GGGRYD L+S+  G   PA GF+IG+ RLI
Sbjct: 260 DYYTHTAFEITT--------GTLGSQATVCGGGRYDSLISQMGGAETPAIGFAIGLERLI 311

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +         + ++E     I  ++    +       ++ LR   +  E+ L S  +F  
Sbjct: 312 IL------CGSELEETRETDIYIVNKGIHAEILAMELSRKLRNYDLVVELDL-SGASFSK 364

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIK----DLAKGKELSREIKNN 463
           Q K A++      I+ G  E  +    I+    D +  KE +  I++N
Sbjct: 365 QFKKANKLKSKSIIVIGDDEAVKNEFVIRLFNNDNSVNKEETISIEDN 412


>gi|255712353|ref|XP_002552459.1| KLTH0C05390p [Lachancea thermotolerans]
 gi|238933838|emb|CAR22021.1| KLTH0C05390p [Lachancea thermotolerans]
          Length = 546

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 128/478 (26%), Positives = 211/478 (44%), Gaps = 55/478 (11%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K +   + P+G  D   K++ IR  I   +  +++ +G   ++TP+ E  + L     ++
Sbjct: 50  KVQFSLKTPKGTKDWSDKDVVIREEIFSRLSGLFKRHGGITLDTPVFELREILAGKYGED 109

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--G 121
              +K +++L+D  G+  SLRYDLT P AR+VA N    +   + Y I  V+R ++    
Sbjct: 110 ---SKLIYNLEDQGGELCSLRYDLTVPFARFVAMNN---IQSMKRYHIAKVYRRDQPAMT 163

Query: 122 PGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
            GR R+F QCD D      +   DAE+  ++ + L  +GIK  DY I +N+RKILDGI +
Sbjct: 164 KGRMREFYQCDFDIAGSYDSMIPDAEVLSIVVEGLSNLGIK--DYKIKLNHRKILDGIFQ 221

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  +        +  A+DKLDK   + VK            +       T E  D +
Sbjct: 222 VAGVSDE----NVRKISSAVDKLDKSPWEAVK-----------HEMVVEKGQTEETADKI 266

Query: 241 VSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             ++ ++       ++      +      ++G +E+  + +       +S  I    ++ 
Sbjct: 267 GEYVKLNGTLQEIYALLSQDSSITSNEKAKQGLDEMATLIKYSEALEIDS-HISFDLSLA 325

Query: 297 RGLEYYTGCVYEAILGF--------------PVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           RGL+YYTG ++EA+                   + +  + V  GS+ GGGRYD LV+ F 
Sbjct: 326 RGLDYYTGIIFEAVTSASAPPKNAAELKKKAKGVEDASEYVGVGSIVGGGRYDNLVNMFA 385

Query: 343 GQ------NVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD---SLSK 392
                    +P  G S G+ R+   LK   E ++        V +       D    L +
Sbjct: 386 ESTGKKSGQIPCVGLSFGVERIFSILKQRAEQASAIRPTATKVYVMAFGGGKDWAGYLPE 445

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
               T+ L  AGI  E    +  N   Q   AD+  CPLA+I G  E     L++K L
Sbjct: 446 RMKVTKQLWNAGIATEFVYKAKSNPRKQFDAADKCGCPLAVILGKEEYLDNKLRVKRL 503


>gi|257456490|ref|ZP_05621686.1| histidyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446150|gb|EEV21197.1| histidyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 438

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 133/472 (28%), Positives = 214/472 (45%), Gaps = 47/472 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ ++ +GF D   ++   R  +++++ N++ N GF PI+TP LEYS+ L +    E   
Sbjct: 2   IQPKVLKGFRDFLPRDEIRRALLIETVTNVFRNAGFVPIDTPALEYSEVLLRKSNGE--T 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K VF   D+ G+ I+LR+DLT P AR++AE++  + FP + Y I  V+R EK   GR+R
Sbjct: 60  EKQVFRFNDNGGRDIALRFDLTVPFARFIAEHYSELYFPFKRYHIAKVWRGEKPQAGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCD D+VGS     D E+  +M   L+A+G+   ++ I I++R I +  L ++ L  
Sbjct: 120 EFIQCDFDSVGSDCAYTDFEILKVMYSALKALGVT--NFRIHISHRGIFNRFLARLELKD 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +      +LR +DKL K G + V   L E                +E+ + +V + + 
Sbjct: 178 KSE-----DILRIVDKLAKIGKEEVIKQLSEIAG-------------AEKAEQIVQYSNS 219

Query: 247 DLEKSMHELYELVKGTIAGEKGFN--ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
               +  E       ++AG    +   L  + +L+  +G   N +   S   RGL+YYTG
Sbjct: 220 FPVGADFETVLTHIESLAGGAAPDTGRLREVYQLLCDAGIAGNFVLDPSIT-RGLDYYTG 278

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            VYE  L              GSV  GGRYD L   +    V   G SIG+ RL+  L+ 
Sbjct: 279 IVYETFLTD--------LPQLGSVCSGGRYDNLTGLYMKDTVSGVGASIGLDRLLAGLEQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L         +  V+     +     S        L   GIR E+F    K    Q  YA
Sbjct: 331 LGIVAKEAGFIDAVIFYEKGNSIRLNSAA---ADYLERNGIRVEVFP-EPKKIQQQYGYA 386

Query: 425 DRRNCPLAIIQ-------GTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +++     +         G  E     +++K L    E +  +K      + 
Sbjct: 387 EKKGIEWGLFIESSSESAGGDELP---VRLKHLPTRTETNLLLKEVPEALKG 435


>gi|218767962|ref|YP_002342474.1| histidyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|32130148|sp|Q9JUZ9|SYH_NEIMA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|121051970|emb|CAM08279.1| putative histidyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 431

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 176/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRTYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNFLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHDQ 413

Query: 474 ITIPISELVSTVK 486
            T+  ++L +T++
Sbjct: 414 QTVAAADLTNTLQ 426


>gi|15594480|ref|NP_212269.1| histidyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|3915061|sp|O51160|SYH_BORBU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|2688030|gb|AAC66531.1| histidyl-tRNA synthetase (hisS) [Borrelia burgdorferi B31]
          Length = 457

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 122/472 (25%), Positives = 202/472 (42%), Gaps = 48/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I ++  +Y FD I+TP+LEYSD L K     D  
Sbjct: 2   MDIKTLKGFKDYLPKDSLIRIHIVRQIFSVLNSYNFDLIDTPVLEYSDLLLKKSG--DET 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+ G+ +S+R+DLT P AR+VA N   +  P R  + G VFR E    GR+R
Sbjct: 60  EKQIYRFKDNGGRDVSMRFDLTVPFARFVATNISALKLPFRRSQFGKVFRGENSQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA-----VGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG      DAE+  ++   LE      +      + I  ++  IL+   EK
Sbjct: 120 EFMQFDFDIVGEDTFRGDAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHIGILNSFFEK 179

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +GL         + +LR IDK+DK G+  VK  L                +  E +D ++
Sbjct: 180 LGLKEKS-----IFILRNIDKIDKIGIDKVKEAL-------------LLEIEKEAVDSIL 221

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           S +S+  + +  +  + +K  +   +    +  + + +       +   ++  I RGL+Y
Sbjct: 222 SLVSL--QGTFKDKIQALKSILGDNESIKRVEDVFQHLSLLKI-QDSFNLNLKISRGLDY 278

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI-- 359
           YTG V+E+ +              GSV  GGRYD LVS F       +G           
Sbjct: 279 YTGIVFESEVFGS---------NMGSVCSGGRYDNLVSSFSNSIQKISGVGGSFGVDRIK 329

Query: 360 -VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL- 411
            +      S            +  ++ DS   + Y       R         I  E++  
Sbjct: 330 DIIDLEKFSYIKIFVTKARSKVLIVNLDSALQNYYYELATRFRNHDYSKVKNISCEVYFK 389

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             + KN   Q++YA  +     +  G  E     ++++DL K +EL    + 
Sbjct: 390 NKNGKNIKEQIEYALSKEIRFLVFVGQEEYKENKMKVRDLTKKEELLLSFEE 441


>gi|225551966|ref|ZP_03772906.1| histidyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225370964|gb|EEH00394.1| histidyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 456

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 123/472 (26%), Positives = 202/472 (42%), Gaps = 48/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I ++  +Y FD I+TP+LEYSD L K     D  
Sbjct: 1   MDIKTLKGFKDYLPKDSLIRIHIVRQIFSVLNSYNFDLIDTPVLEYSDLLLKKSG--DET 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+ G+ +S+R+DLT P AR+VA N   +  P R  + G VFR E    GR+R
Sbjct: 59  EKQIYRFKDNGGRDVSMRFDLTVPFARFVATNISALKLPFRRSQFGKVFRGENSQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA-----VGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG      DAE+  ++   LE      +      + I  ++  IL+   EK
Sbjct: 119 EFMQFDFDIVGEDTFRGDAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHIGILNSFFEK 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +GL         + +LR IDK+DK G+  VK  L                +  E +D ++
Sbjct: 179 LGLKEKS-----IFILRNIDKIDKIGIDKVKEAL-------------LLEIEKEAVDSIL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           S +S+  + +  +  + +K  +   +    +  + + +       +   ++  I RGL+Y
Sbjct: 221 SLVSL--QGTFKDKIQALKSILGYNESIKRVEDVFQHLSLLKI-QDSFNLNLKISRGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI-- 359
           YTG V+E+ +              GSV  GGRYD LVS F       +G           
Sbjct: 278 YTGIVFESEVFGS---------NMGSVCSGGRYDNLVSSFSNSIQKISGVGGSFGVDRIK 328

Query: 360 -VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL- 411
            +      S            +  ++ DS   + Y       R         I  E++  
Sbjct: 329 DIIDLEKFSYIKIFVTKARSKVLIVNLDSALQNYYYELATRFRNHDYSKVKNISCEVYFK 388

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             + KN   Q++YA  +     I  G  E     ++++DL K +EL    + 
Sbjct: 389 NKNGKNIKEQIEYALSKEIRFLIFVGQEEYKENKMKVRDLTKKEELLLSFEE 440


>gi|229012525|ref|ZP_04169699.1| Histidyl-tRNA synthetase 1 [Bacillus mycoides DSM 2048]
 gi|228748685|gb|EEL98536.1| Histidyl-tRNA synthetase 1 [Bacillus mycoides DSM 2048]
          Length = 431

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 128/456 (28%), Positives = 213/456 (46%), Gaps = 42/456 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D   +E  +RN+I  +  + +E YG  P+ETP L   D +       D   K +++
Sbjct: 8   KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYDLMSYKYGGGDEILKEIYT 67

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR+FIQCD
Sbjct: 68  LKDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 126

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  +     
Sbjct: 127 VDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQSINIPTE----L 179

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V+ ++DK++K G+ GV+  + +              +T E  D + + +   L+  +
Sbjct: 180 TSDVILSLDKIEKIGIDGVRKDVLDR------------GITVEMADTICNTVLSCLKLPI 227

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  +    T+  + G  EL  + + +   G N N I  +  + RGL  YTG VYE  L 
Sbjct: 228 ADFKDTFNNTLVAD-GVEELQQLQQYLLALGINENTI-FNPFLARGLTMYTGTVYEIFLK 285

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              +           +G GGRYD ++   R    N P  G S G+  +  AL   E    
Sbjct: 286 DGTITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQKE---- 333

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYADRRNC 429
            I     + I  +  +     +     Q LR+   ++ E+ L + +     L YA++ N 
Sbjct: 334 TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-AGRKLKRALNYANKENI 388

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           P  +I G  E S   + ++++ +G E+   + + E+
Sbjct: 389 PYVLIIGEEELSTETVVLRNMKEGTEVKIPLSSLEN 424


>gi|195345479|ref|XP_002039296.1| GM22902 [Drosophila sechellia]
 gi|194134522|gb|EDW56038.1| GM22902 [Drosophila sechellia]
          Length = 542

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 103/486 (21%), Positives = 200/486 (41%), Gaps = 67/486 (13%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++  
Sbjct: 102 KFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED-- 159

Query: 66  PNKGVFSLQDDDGQWISLRY-DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            +K ++  +   G+ +S+R  D T P                                GR
Sbjct: 160 -SKLIYDWKIQGGEILSMRSTDATIPAM----------------------------TKGR 190

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F QCD D  G+         C+ +   +    +   DY I +N+R++LDG+ +  G+
Sbjct: 191 YREFYQCDFDIAGTYDPMLPDAECVKIVSEILDT-LDIGDYVIKLNHRQLLDGMFQACGV 249

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D        +  A+DKLDK     V+  + +              L     D +  ++
Sbjct: 250 PADS----FRTICSAVDKLDKSPWADVRKEMVDE-----------KGLDEAAADRIGEYV 294

Query: 245 SIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +     + E     E +K      KG   +  + +     G +  R+    ++ RGL+Y
Sbjct: 295 RLSGGAELVEQLLADEKLKAVPNAVKGLEGMKQLLKYCSIFGLDK-RVSFDLSLARGLDY 353

Query: 302 YTGCVYEAILGFP-------------VMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNV 346
           YTG +YE +L                   +  +P   GSV GGGRYD L  +   +G+ V
Sbjct: 354 YTGVIYEGVLKGESATVASPAKTSQQNGEQANEPATVGSVAGGGRYDNLVGMFDPRGKAV 413

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG+ R+   L++  +++        V +           +      +L  AG++
Sbjct: 414 PCVGVSIGVERIFSVLEARAAASGLKLRTSDVEVYVASAHKGLHEQRLKVLNLLWDAGVK 473

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE     +     QL++ +    PL ++ G  E ++G+++++++   +E + ++K+  + 
Sbjct: 474 AEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKLREVTTREETNVKLKDLVAE 533

Query: 467 REARVA 472
              R  
Sbjct: 534 IRRRQQ 539


>gi|254804725|ref|YP_003082946.1| Histidyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668267|emb|CBA05143.1| Histidyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 472

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 174/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 45  KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 104

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 105 GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 164

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 165 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 224

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 225 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 267

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 268 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 304

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 305 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 356

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 357 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGERADLQVMKYAQALRAQGFNV-MQHSG 411

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 412 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 454

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 455 QTVAAEDLTHTLQ 467


>gi|228922043|ref|ZP_04085354.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837651|gb|EEM82981.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 428

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 129/455 (28%), Positives = 210/455 (46%), Gaps = 42/455 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 4   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 64  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 123 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILEFINIPT 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 180 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 223

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +     N N I  +  + RGL  YTG V
Sbjct: 224 CLKLSIADFKEAF-NNQLVADGVNELQQLQQYLIALRINENTI-FNPFLARGLTMYTGTV 281

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 282 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 333

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR-TAGIRAEMFLGSSKNFGNQLKY 423
            E++ +         +  +   ++ L       Q LR T  ++ E+ L + +     L Y
Sbjct: 334 KETTPSTAD------LFIIPLGTELL--CLQIAQQLRTTTSLKIELEL-AGRKLKRALNY 384

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           A++ N P  +I G  E S   + ++++ +G E+  
Sbjct: 385 ANKENIPYVLIIGEEELSTETVMLRNMKEGSEVKV 419


>gi|111114958|ref|YP_709576.1| histidyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|216263908|ref|ZP_03435902.1| histidyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|123145783|sp|Q0SP28|SYH_BORAP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|110890232|gb|ABH01400.1| histidyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|215979952|gb|EEC20774.1| histidyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 456

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 120/472 (25%), Positives = 203/472 (43%), Gaps = 48/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I ++  +Y FD I+TP+LEYS+ L K     D  
Sbjct: 1   MDIKTLKGFKDYLPKDSLIRIHIVRQIFSVLNSYNFDLIDTPVLEYSELLLKKSG--DEA 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+ G+ +S+R+DLT P AR++A N   + FP R  + G VFR E    GR+R
Sbjct: 59  EKQIYRFKDNGGRDVSMRFDLTVPFARFIATNASNLKFPFRRSQFGKVFRGENSQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA-----VGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG  +   DAE+  ++   LE      +      + I  ++  IL+   EK
Sbjct: 119 EFMQFDFDIVGEDSFRGDAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHLGILNSFFEK 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +G+         L +LR IDK+DK G+  VK  L                +  E +D ++
Sbjct: 179 LGIKEKS-----LFILRNIDKIDKIGVDKVKEAL-------------LLKIEKEVVDSIL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           + +++  + +  E  + +K  +   +    +  + + +       +   ++  I RGL+Y
Sbjct: 221 NLVNL--QGTFKEKIQALKSILGDNESVKRVEDVFQHLSLLKI-QDSFNLNLKISRGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI-- 359
           YTG V+E+ +              GSV  GGRYD LVS F       +G           
Sbjct: 278 YTGIVFESEVFDS---------NMGSVCSGGRYDNLVSSFSSSIQKISGVGGSFGVDRIK 328

Query: 360 -VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL- 411
            +      S            +  ++ DS     Y       R         I  E++  
Sbjct: 329 DIIDLEKFSYVKIFVTKARSKVLIVNLDSALQDYYYELATRFRNHDYSKVKNISCEVYFK 388

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             + KN   Q++YA  +     +  G  E     ++++DL K +EL    + 
Sbjct: 389 NKNGKNIKEQIEYALSKEIRFLVFVGQEEYKENKMKVRDLTKKEELLLSFEE 440


>gi|325142103|gb|EGC64529.1| histidyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198054|gb|ADY93510.1| histidyl-tRNA synthetase [Neisseria meningitidis G2136]
 gi|325203922|gb|ADY99375.1| histidyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 431

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 174/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGERADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 414 QTVAAEDLTHTLQ 426


>gi|225549323|ref|ZP_03770296.1| histidyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370181|gb|EEG99621.1| histidyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 457

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 122/472 (25%), Positives = 202/472 (42%), Gaps = 48/472 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I ++  +Y FD I+TP+LEYSD L K     D  
Sbjct: 2   MDIKTLKGFKDYLPKDSLIRIHIVRQIFSVLNSYNFDLIDTPVLEYSDLLLKKSG--DET 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+ G+ +S+R+DLT P AR+VA N   +  P R  + G VFR E    GR+R
Sbjct: 60  EKQIYRFKDNGGRDVSMRFDLTVPFARFVATNISALKLPFRRSQFGKVFRGENSQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA-----VGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG      DAE+  ++   LE      +      + I  ++  IL+   EK
Sbjct: 120 EFMQFDFDIVGEDTFRGDAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHIGILNSFFEK 179

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +GL         + +LR IDK+DK G+  VK  L                +  E +D ++
Sbjct: 180 LGLKEKS-----IFILRNIDKIDKIGIDKVKKAL-------------LFEIEKEAVDSIL 221

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           S +S+  + +  +  + +K  +   +    +  + + +       +   ++  I RGL+Y
Sbjct: 222 SLVSL--QGTFKDKIQALKSILGDNESIKRVEDVFQHLSLLKI-QDSFNLNLKISRGLDY 278

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI-- 359
           YTG V+E+ +              GSV  GGRYD LVS F       +G           
Sbjct: 279 YTGIVFESEVFGS---------NMGSVCSGGRYDNLVSSFSNSIQKISGVGGSFGVDRIK 329

Query: 360 -VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL- 411
            +      S            +  ++ DS   + Y       R         I  E++  
Sbjct: 330 DIIDLEKFSYIKIFVTKARSKVLIVNLDSALQNYYYELATRFRNHDYSKVKNISCEVYFK 389

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             + KN   Q++YA  +     +  G  E     ++++DL K +EL    + 
Sbjct: 390 NKNGKNIKEQIEYALSKEIRFLVFVGQEEYKENKMKVRDLTKKEELLLSFEE 441


>gi|260951401|ref|XP_002619997.1| hypothetical protein CLUG_01156 [Clavispora lusitaniae ATCC 42720]
 gi|238847569|gb|EEQ37033.1| hypothetical protein CLUG_01156 [Clavispora lusitaniae ATCC 42720]
          Length = 534

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 126/518 (24%), Positives = 209/518 (40%), Gaps = 64/518 (12%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            KK +   + P+G  D   K++ +R  I  ++ ++++ +G   ++TP+ E  + L     
Sbjct: 37  AKKQEFLLKTPKGTKDWADKDMVLREAIFSTLSDMFKKHGGQALDTPVFELREILTGKYG 96

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           ++   +K +++LQD  G+  SLRYDLT P AR+VA N  + +                  
Sbjct: 97  ED---SKLIYNLQDQGGELTSLRYDLTVPFARFVAANSISSIKRYHIA-KVYRRDQPAMT 152

Query: 122 PGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
            GR R+F QCD D          DAE+  ++ + L ++G   +D+ I +N+RK+LDGI +
Sbjct: 153 KGRMREFYQCDFDIAGTYDPMVPDAEVLAILVEGLTSLG--IHDFKIKLNHRKVLDGIFQ 210

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  +D       +  A+DKLDK   + VK            +            D +
Sbjct: 211 ACGVKDED----VRKISSAVDKLDKLPWEAVKK-----------EMCVEKGQPEAVADKI 255

Query: 241 VSFLSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             F+ +           +  EL+    + +KG +++  ++  V       + +    ++ 
Sbjct: 256 GEFVKVKGSLKHTLDFLQGSELLASNESAQKGISDMAELAGYVEALQI-EDHLSFDLSLA 314

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKP-----------------VVFGSVGGGGRYDGLVS 339
           RGL+YYTG +YEA+          +                  V  GS+  GGRYD LV 
Sbjct: 315 RGLDYYTGLIYEAVTEASAPPSNAEELKARAKKENKDEDASEYVGVGSIAAGGRYDNLVG 374

Query: 340 RFKGQNV-PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS-----LSKY 393
            F      P  G S G+ R+   LK+  +            +  M     +     L + 
Sbjct: 375 MFSNGKTIPCVGISFGVERIFSILKARAAKEWENLSSTHTDVYIMAFGGGAGWTGFLKER 434

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
               + L  AGI AE       N   Q   AD+    LA+I G  E   G L++K L +G
Sbjct: 435 MTVARQLWAAGINAEYLYKVKANPRKQFDAADKAKAKLAVILGKEEYPEGKLRVKVLGQG 494

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                                 +   E+V  VK+ L E
Sbjct: 495 D--------------DSTDGDLVEAGEIVEVVKQKLGE 518


>gi|154341505|ref|XP_001566704.1| histidyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064029|emb|CAM40220.1| putative histidyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 473

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 97/467 (20%), Positives = 188/467 (40%), Gaps = 37/467 (7%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            +   +  E  +G  D P +++R+R  +          +GF+  + P+LE  +   +   
Sbjct: 43  SQANMIEKEPVQGCRDFPPEDMRVRRHLFGVFHETARKFGFEEYDAPVLESEELYIRKAG 102

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +E      +F+     G  ++LR ++T  L R       +++ P + Y I   +R E   
Sbjct: 103 EE--ITDQMFNFVTKGGHRVTLRPEMTPSLVRLQLSKGRSLLLPAKWYSIPQCWRYEAIS 160

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR R+  Q ++D VG  +  A+ E+       + ++G+   D  + +++RK+L   L  
Sbjct: 161 RGRRREHYQWNMDIVGVKSVAAEVELLCAACTAMSSLGLTAQDVGVKVSSRKLLQCALTG 220

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+           V   +DK++K   + ++  L E              L ++Q D ++
Sbjct: 221 AGVPDS----LFASVCVIVDKMEKLPEEQIRAELKE------------LGLDAQQADGII 264

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             LS+       +      G ++      EL  +   ++  GY  + ++   ++VRGL Y
Sbjct: 265 RTLSLKSVDDFDKDLFDKNGALS------ELTELFVQMQMYGYG-DWVQFDPSVVRGLAY 317

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG V+EA           +   F ++ GGGRYD L + +     P +    G    ++ 
Sbjct: 318 YTGIVFEAF---------DRSGEFRAICGGGRYDNLFTLYG-SPQPVSCVGFGFGDCVIV 367

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
            + L+           V    +  +           + LR  G  A++ + S K      
Sbjct: 368 -ELLKKKRLLNPLPHKVDDVVIPFNESQRGTALKVLKQLRDKGRSADIIMDS-KKIVQTF 425

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            YADR     A++    E  +GM ++K L +G+    +  +   + E
Sbjct: 426 SYADRIGADRAVLIAPDETEKGMARVKMLREGQGREDDRGDLVPFEE 472


>gi|91205348|ref|YP_537703.1| histidyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157826949|ref|YP_001496013.1| histidyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|123084580|sp|Q1RJ50|SYH_RICBR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|166228605|sp|A8GVU9|SYH_RICB8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|91068892|gb|ABE04614.1| Histidyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157802253|gb|ABV78976.1| histidyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 415

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 85/467 (18%), Positives = 170/467 (36%), Gaps = 63/467 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    + ++ + I+   + + E YG+  + TP+LEY+    + + +  D  
Sbjct: 4   KLQPLRGMKDLLPDDYKVHDYIIKKAKEVGELYGYKQMSTPILEYTKVFNRSMGESSDVI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D   + ++LR + TA + R    N      P + +  GPVFR ++   GR R
Sbjct: 64  SKEIYSFLDKSDESVALRPEFTAGIVRAFISNGLQHKLPLKLFSTGPVFRYDRPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q + + +G+    +DAE   +  D L+++ +  +     +      +R      L +
Sbjct: 124 QFHQLNYEYLGAKGAISDAETLKLAVDILQSLEVLADTTLELNSLGCSQSRSTYQQKLVE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        D   +     +++L  +   D                 ++ 
Sbjct: 184 YLNDFKDELSE--------DSKIRLTKNPMRILDSKSEVDQK---------IVANAPVLS 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            + + + +K                    EL+   +++        +  I++ +VRGL+Y
Sbjct: 227 EYYTEESKKYF-----------------EELLKYLDIL------GVKYTINARLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E            K     ++  GGRYDGL       +             I  
Sbjct: 264 YCHTAFEFTTT--------KLGSQSTILAGGRYDGLSRIMGNNDEIPAIGFAAGIERIAL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++                I  +    +++S        LR   I   +    S     ++
Sbjct: 316 MREYNI-------DSVTPIFVLPIGENNISHSLKIADQLRLHNIPVLI--EVSGKMAKRM 366

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           + A   N    +  G  E++   L+IKDL K +E   +        +
Sbjct: 367 QRALNENAKFIVFIGDEEQANNNLKIKDLEKQEEYILDFSKTIELLK 413


>gi|328956051|ref|YP_004373384.1| histidyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456375|gb|AEB07569.1| histidyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 438

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 105/485 (21%), Positives = 181/485 (37%), Gaps = 66/485 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           +RA+   G  D   +++R    + D+   ++E +GF+  ETP +E  D     +    D 
Sbjct: 1   MRAQRAEGTRDLIGRDMRAWIAMRDAAAEVFEPFGFELAETPAIEQVDVFVHGIGQSTDV 60

Query: 66  PNKGVFSLQD----------------DDGQWISLRYDLTAPLARYVAENFDTIVF--PCR 107
             K +F +                     Q ++LR + TA L R V E         P +
Sbjct: 61  VRKEMFRVFSGANLERALTQGTEANLKAKQRLALRPEGTAGLVRAVVEGNLVPPGGAPVK 120

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            Y    +FR E+   GR RQF Q  ++ +G+    ADAE  +M+ +    +G   N   +
Sbjct: 121 LYYAEAMFRGERPQRGRLRQFHQIGIEWLGAPDAAADAESIVMLMEFYRRIGFDMNRLRL 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            IN+    D                R       +  ++  L  ++    + + D      
Sbjct: 181 SINSMG--DARCRPAYREKVRDFIARHADEMCDECRERAQLNPLRAF--DCKNDRCSKIM 236

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
           + A L       M+  L  +      ++   +                            
Sbjct: 237 RSAPL-------MIDNLCEECRAHHDQVKRYLDAA-----------------------GV 266

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
                 T+VRGL+YYT  V+E                 GS+GGGGRYDGLV    G+  P
Sbjct: 267 SYLEDPTLVRGLDYYTRTVFEVEAL---------DAAVGSIGGGGRYDGLVELEGGKPTP 317

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             GF++G  R+++AL++  +            +   +  +D   +       LR AG+R 
Sbjct: 318 GVGFAVGFERIMLALEAQGTRLGKDAPP---CVYVANAGADLRERVFDIALQLRAAGVRT 374

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E      ++   Q K ADR    L I+ G  E + G ++++D+   +E    +       
Sbjct: 375 EADY-QGRSLKGQFKQADRLKAALIIVIGAEELAAGAVRVRDMVSHEERLVALDEILEDV 433

Query: 468 EARVA 472
            +R++
Sbjct: 434 RSRLS 438


>gi|325134013|gb|EGC56668.1| histidyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 431

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 174/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYRQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGADIDAEIVAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYVENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 414 QTVAAEDLTHTLQ 426


>gi|322493455|emb|CBZ28743.1| putative histidyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 473

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 97/467 (20%), Positives = 187/467 (40%), Gaps = 37/467 (7%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            +   +  E  +G  D P +++R+R  +          +GF+  + P+LE  +   +   
Sbjct: 43  SQANMIEKEPVQGCRDFPPEDMRVRRHLFGVFHETARKFGFEEYDAPVLESEELYIRKAG 102

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +E    + +F+     G  ++LR ++T  L R       +++ P + Y I   +R E   
Sbjct: 103 EE--ITEQMFNFVTKGGHRVTLRPEMTPSLVRLQLAKGRSLLLPAKWYSIPQCWRYEAIS 160

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR R+  Q ++D VG  +  A+ E+       +E++G+   D  + +N+RK+L   L  
Sbjct: 161 RGRRREHYQWNMDIVGVKSVAAEVELVCAACAAMESLGLTAQDVGVKVNSRKLLQCALVS 220

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+           V   +DK++K   + ++  L +              L  +Q D ++
Sbjct: 221 AGVPDS----LFAPVCVIVDKMEKLPEEQIRAELRD------------LGLDGQQADDII 264

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             LS+       +      G ++      E+      +R  GY  + I+  +++VRGL Y
Sbjct: 265 RTLSLRSVDDFDKDLFDKNGALS------EVAEFFSQMRMYGYG-DWIQFDASVVRGLAY 317

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG V+EA           +   F ++ GGGRYD L + +     P +    G    +  
Sbjct: 318 YTGIVFEAF---------DRSGEFRAICGGGRYDNLFTLYG-SPQPVSCVGFGFGDCV-I 366

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++ L+           V    +  +           + LR  G  A++ + S K      
Sbjct: 367 IELLKKKKLINSLPHKVDDVVIPFNESQRGTALKVLKQLRDKGRSADVIMDS-KKVAQTF 425

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            YADR     A++    E  +GM ++K L   +    +  +   + +
Sbjct: 426 SYADRIGADRAVLIAPDETEKGMARVKMLRDEERGEDDRGDLVPFED 472


>gi|229060917|ref|ZP_04198272.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH603]
 gi|228718564|gb|EEL70196.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH603]
          Length = 431

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 125/456 (27%), Positives = 212/456 (46%), Gaps = 42/456 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  +K +++
Sbjct: 8   KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEISKEIYT 67

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR+FIQCD
Sbjct: 68  LKDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 126

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  +     
Sbjct: 127 VDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQSINIPTE----L 179

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V+ ++DK++K G+ GV+  + E              +T E  D + + +   L+  +
Sbjct: 180 TSDVILSLDKIEKIGIDGVRKDVLER------------GITVEMADTICNTVLSCLKLPI 227

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  +    T+  + G  EL  + + +   G N N I  +  + RGL  YTG VYE  L 
Sbjct: 228 ADFKDTFNNTLVAD-GVEELQQLQQYLLALGINENTI-FNPFLARGLTMYTGTVYEIFLK 285

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              +           +G GGRYD ++   R    N P  G S G+  +  AL        
Sbjct: 286 DGTITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQK----- 332

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYADRRNC 429
                    +  +   ++   +     Q LR+   ++ E+ L + +     L YA++ N 
Sbjct: 333 -ATTSSTADLFIIPLGTEL--QCLQIAQQLRSTTSLKIELEL-AGRKLKRALNYANKENI 388

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           P  +I G  E S   + ++++ +G E+   + + E+
Sbjct: 389 PYVLIIGEEELSTETVVLRNMKEGTEVKIPLSSLEN 424


>gi|161869789|ref|YP_001598957.1| histidyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189082302|sp|A9M402|SYH_NEIM0 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|161595342|gb|ABX73002.1| histidyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 431

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 102/493 (20%), Positives = 176/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRTYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL+  +    S   N        +  M     +  +   Y Q LRT G    M    
Sbjct: 316 GIERLLFLVSEYGSLEVNAAPD----VYAMHQGERADLQVMKYAQALRTQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+  ++L +T++
Sbjct: 414 QTVAAADLTNTLQ 426


>gi|225851404|ref|YP_002731638.1| histidyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645504|gb|ACO03690.1| histidyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 411

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 101/468 (21%), Positives = 186/468 (39%), Gaps = 63/468 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           +    RGF D   +  +    ++D  R ++E Y F+ I  P +E      + + +  D  
Sbjct: 3   QLRKVRGFQDIYGENAKKYRYVVDKAREVFERYNFEEIILPYVEDVSLFIRSVGEETDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRF 125
            K ++  +D  G+ ++LR + TA   R   E          + +  G +FR E+   GR+
Sbjct: 63  QKEMYVFEDRGGRKVALRPEGTASAVRAYIEEGLYAKGGYQKLFYEGAMFRYERPQAGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   +  G     ADAE+  M+ D L+++ I        + +       +EK+ + 
Sbjct: 123 RQFHQIGAEIFGVDTPLADAELIKMVKDILDSLRIDVRLEINSLGDFDSRKLYVEKLKVF 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             ++       L   D   +     +++L  +          +     +E   +++ FLS
Sbjct: 183 LKERE-----ELLCDDCRKRIERNPLRVLDCK---------VEECKRATEDAPVILDFLS 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               +   +L E + G     K    L                       VRGL+YYT  
Sbjct: 229 EKSAERFEKLKEYLTGLGIDYKVNPRL-----------------------VRGLDYYTDT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E I          K    G+V  GGRYD LV +  G + PA GF+ GI RL++ L+ L
Sbjct: 266 VFEFIT--------DKIGAQGTVAAGGRYDTLVKQLGGPDTPALGFAAGIERLMLLLEEL 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               + +  +  +    +        +     + LR +GI+ E+ L    +  +++K A+
Sbjct: 318 PEERSVVVVIPVISDFNL--------EALKTAEKLRESGIKTELVLKEG-SLKSRMKLAN 368

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE-IKNNESWREARVA 472
           +      I            ++KD+  G++ + + I +     + RV+
Sbjct: 369 KIKGKFVIFVSE------KPELKDMGTGEQEAFDNIDDLIEVLKGRVS 410


>gi|325202359|gb|ADY97813.1| histidyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207889|gb|ADZ03341.1| histidyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 431

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 174/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQVFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGERADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 414 QTVAAEDLTHTLQ 426


>gi|302349282|ref|YP_003816920.1| Histidyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302329694|gb|ADL19889.1| Histidyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 432

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 146/463 (31%), Positives = 226/463 (48%), Gaps = 36/463 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRGF D P     +R  ++  +  +Y  YGFDP+ETP +E  + L     +E   
Sbjct: 1   MDLRPPRGFRDIPPDLAILRKELMGRVEAVYRRYGFDPLETPAVESWEVLAGKYGEEAE- 59

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            + ++  +D    +  +LRYDLT PLARY+A +   I  P + Y+I PV+R+++   GR+
Sbjct: 60  GRLIWRFKDPWSDREYALRYDLTVPLARYIASH-PEIPMPFKRYQIAPVWRHDEPQRGRY 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F Q DVD VGS    ADAE+  ++ D L+A+G+    + + IN+R+IL GI E     
Sbjct: 119 REFYQADVDVVGSPYPEADAEIINVIVDALDALGVGSG-FRVLINDRRILAGIFE----- 172

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +  L + L V R IDKLDK G +GV+  L         +   GA   S+ ++++   + 
Sbjct: 173 EELSLKDPLAVYRIIDKLDKVGEEGVRAEL---------ERLLGAPAASKVMEVIS--IK 221

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D+  S+  L           KG   L  +++LVR        ++ S ++VRGL+YYTG 
Sbjct: 222 GDVADSLDRLSREHGSNATLMKGVEHLRQVAQLVR----RPQALEFSMSLVRGLDYYTGP 277

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           + E +L              GSV GGGRYD L+S F  + VPATG SIGI RLI A   L
Sbjct: 278 ILEVVLD---------RPRIGSVAGGGRYDNLISLFAKREVPATGASIGIDRLIDA--GL 326

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           E             +  ++   +S +       +LR+ G    + L  S     Q + A 
Sbjct: 327 EVGLFRADRRTYTQVMVVNVRPESYAYAWRVADVLRSWGFSVRVDLNRSGQ-DEQRRRAL 385

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +   P+    G  E + G + +   +KG+ L+  ++      E
Sbjct: 386 KLGVPVVAFVGPQEEASGSVTLYSPSKGERLTVRLEEARQALE 428


>gi|16081268|ref|NP_393577.1| histidyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|13878789|sp|Q9HLX5|SYH_THEAC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|10639245|emb|CAC11247.1| probable histidyl-tRNA synthetase [Thermoplasma acidophilum]
          Length = 426

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 111/465 (23%), Positives = 199/465 (42%), Gaps = 43/465 (9%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +L+ E  RGF D   +++ +   I  +     E +GF  I+ P LEY D       +E  
Sbjct: 3   RLQIEKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEE-- 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             +  +S  D  G+ ++L  + T    R V      +  P R Y    V+R E+   GR+
Sbjct: 61  LLQQTYSFVDKGGREVTLIPEATPSTVRMVTSRK-DLQRPLRWYSFPKVWRYEEPQAGRY 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+  Q + D  GS +  ADAE+  + +  L+ +G+ ++ Y I IN+RKI++ I+  +   
Sbjct: 120 REHYQFNADIFGSDSPEADAEVIALASSILDRLGL-QDIYEIRINSRKIMEEIIGGMTSS 178

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 +   V   ID+  K   +               D  + A +  + + ++    S
Sbjct: 179 ------DPFSVFSIIDRYHKISREEF------------VDQLRSAGIGEDGVSMIADLCS 220

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + + E+  +   +    +    +  + +L+   G  + R   S  IVRGL YYTG 
Sbjct: 221 --GTRGIDEMARITGKS---SEEIARMAAVEDLLASYGVKNVRYDFS--IVRGLSYYTGI 273

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+EA           +   F ++ GGGRYD L S   G++VPA GF +G + + + LK  
Sbjct: 274 VFEAY---------DRSGQFRAILGGGRYDNLASLMSGESVPAVGFGMGDAVISLLLKRE 324

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                  K+     +        + S    Y++ LR  G+   + +   +    QLKYA 
Sbjct: 325 NVQIPREKK----SVYICRVGKINSSIMNEYSRKLRERGMNVTVEIME-RGLSAQLKYAS 379

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 A+I G  +  RG++ I+++  G + +  + +      ++
Sbjct: 380 AIGADFAVIFGERDLERGVVTIRNMYTGSQENVGLDSVVEHLISQ 424


>gi|59800869|ref|YP_207581.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|240115278|ref|ZP_04729340.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|260440905|ref|ZP_05794721.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268600959|ref|ZP_06135126.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291044229|ref|ZP_06569938.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|75507409|sp|Q5F9G8|SYH_NEIG1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|59717764|gb|AAW89169.1| putative histidyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|268585090|gb|EEZ49766.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291011123|gb|EFE03119.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 431

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 98/497 (19%), Positives = 173/497 (34%), Gaps = 92/497 (18%)

Query: 8   RAELPRGFADCPT-------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D                    D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVGQKDFKLTAVFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+           +     
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L +     D+            D   +     +++L  +            
Sbjct: 184 AHRAALVEYLTRYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +V +L    +        ++ G                          + 
Sbjct: 223 LQEICNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +S +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ 
Sbjct: 260 IENSRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +    S   N        +  M     +  +   Y Q LR  G    +
Sbjct: 312 GFAMGIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-I 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                ++   Q+K AD      A+I    E + G + +KD+                   
Sbjct: 367 QHSGYQSLKAQMKKADNSGARFALIVAQDELADGTVTLKDM-----------------NG 409

Query: 470 RVAQITIPISELVSTVK 486
              Q T+  ++L  T++
Sbjct: 410 AHGQQTVSATDLTDTLQ 426


>gi|322370889|ref|ZP_08045444.1| histidyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320549566|gb|EFW91225.1| histidyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 432

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 111/462 (24%), Positives = 199/462 (43%), Gaps = 34/462 (7%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  +GF D   +E      I+D++      +GF  I+ P +E +D       DE    +
Sbjct: 4   LESLKGFYDRYPEEWAAWREIVDTVEETAREFGFREIDAPSVEPTDLFRVKSGDEIV--E 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             +S +D  G+ ++L  + T   +R V +    +  P + +     +R E    GR R+F
Sbjct: 62  QTYSFEDKGGREVTLIPEQTPTRSRLVQQRK-DLGTPIKWFDTSKRWRYEAVQKGRDREF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q D+D  G  +  ADAE+    A   E +G+  +     +N+R++LD +L+ + + G  
Sbjct: 121 FQTDIDIFGVESVEADAEIIACAATIYEKLGV-ADAVEFRLNDRQLLDALLKAMDVEGS- 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                  V+R IDK +K   +     L     D +         T+E+ID + + +S ++
Sbjct: 179 -----KDVMRVIDKKEKLSREEFLDNLELEGVDRA---------TAEEIDELTA-ISGEM 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           E ++ EL +      A +     +  + +++       +      +IVRG++YYTG V+E
Sbjct: 224 ESALVELSDKAPEGDAADDAIERMHDLYDVLSAYDV-EDMCTFDLSIVRGMDYYTGLVFE 282

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 ++ GGGRYD L+ +F  + VPA GF+ G S  +  LK L   
Sbjct: 283 AFSTE---------GDLRALFGGGRYDHLIEQFGSREVPAIGFAFGYSTTMHLLKKLGEW 333

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +            +            Y + LR+AG+  E  L + ++ G Q  YADR N
Sbjct: 334 PDEALSTDA---YVLTISDSVREIGLEYAKGLRSAGLTVETDL-TGRSVGEQFGYADRIN 389

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               ++ G  + + G++ ++++  G+E              R
Sbjct: 390 AEYTVVVGERDLNEGVVTVQNMDSGEEEQVPKNEVVENVLDR 431


>gi|240013745|ref|ZP_04720658.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240016183|ref|ZP_04722723.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240080327|ref|ZP_04724870.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240112538|ref|ZP_04727028.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240117565|ref|ZP_04731627.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240120815|ref|ZP_04733777.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|240123120|ref|ZP_04736076.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240125371|ref|ZP_04738257.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|254493339|ref|ZP_05106510.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268596473|ref|ZP_06130640.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268598606|ref|ZP_06132773.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268603266|ref|ZP_06137433.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268681746|ref|ZP_06148608.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268683973|ref|ZP_06150835.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|293399428|ref|ZP_06643581.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|226512379|gb|EEH61724.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268550261|gb|EEZ45280.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268582737|gb|EEZ47413.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268587397|gb|EEZ52073.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268622030|gb|EEZ54430.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268624257|gb|EEZ56657.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|291609997|gb|EFF39119.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 431

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 99/497 (19%), Positives = 173/497 (34%), Gaps = 92/497 (18%)

Query: 8   RAELPRGFADCPT-------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D                    D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVGQKDFKLTAVFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+           +     
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L +     D+            D   +     +++L  +            
Sbjct: 184 AHRAALVEYLTRYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +V +L    +        ++ G                          + 
Sbjct: 223 LQEICNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +S +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ 
Sbjct: 260 IENSRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M
Sbjct: 312 GFAMGIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-M 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                ++   Q+K AD      A+I    E + G + +KD+                   
Sbjct: 367 QHSGYQSLKAQMKKADNSGARFALIVAQDELADGTVTLKDM-----------------NG 409

Query: 470 RVAQITIPISELVSTVK 486
              Q T+  ++L  T++
Sbjct: 410 AHGQQTVSATDLTDTLQ 426


>gi|254670448|emb|CBA06083.1| Histidyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 431

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 100/493 (20%), Positives = 174/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYRQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E + I+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIITMSADLWEKLSIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVGEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L +T++
Sbjct: 414 QTVAAEDLTNTLQ 426


>gi|15895997|ref|NP_349346.1| histidyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|32130138|sp|Q97FJ7|SYH_CLOAB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|15025776|gb|AAK80686.1|AE007771_6 Histidyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510150|gb|ADZ21786.1| histidyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 430

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 122/464 (26%), Positives = 210/464 (45%), Gaps = 35/464 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKF 59
           M    K++  +  GF +   KE  + N I+  I  +YE  GF P++TP++E  +  L K 
Sbjct: 1   MN--NKIKPSILPGFMELLPKEQLVFNDIVSKITGVYEQNGFLPMDTPIIEKEEVLLAKS 58

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             +     K V+   D++ +   LR+DLT P +R+ A+    + FP + Y++G V+R E+
Sbjct: 59  AGET---EKQVYR-IDNEDRKQVLRFDLTVPFSRFAAQYMSDLTFPFKRYQLGKVYRGER 114

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
           +  GR+R+F QCDVD VG+   +   +  ++   +     I  + Y   I+NRKIL G+L
Sbjct: 115 NQKGRYREFYQCDVDVVGNGNLSIKNDAFIINMASKALRKIGLDSYKFQISNRKILTGVL 174

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E + +           V+  IDK DK   +     L +   +            ++ I  
Sbjct: 175 EGLNITN------MQEVMILIDKYDKITEEQFLSELNKLIGEEK----------AKVISK 218

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++  +S   ++ +  L ++       EKG  E+  + + ++  G   +   I+  I+RGL
Sbjct: 219 VIK-ISGSSDEVVENLKKVEIKNEMLEKGIEEVEEVIKYLKLFGVEDSEYAINLKIIRGL 277

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG V+E +L             +GS+  GGRYD L   +    +P  G SIGI+RL 
Sbjct: 278 DYYTGTVFETLLTGNE--------SYGSICSGGRYDNLAQNYTENVLPGVGMSIGITRLF 329

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L+ +    N    +    +       D+          L   G  AE++    K    
Sbjct: 330 FVLREIGFIENYNSSLNEKYLIV--PIGDTFEYCTKILNKLLVNGKSAEIYFEEGK-LKK 386

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +L YA++ +    I+ G  E +   L IKD+  G++    I+  
Sbjct: 387 KLTYANKLDIKYVILIGEDEVTNKELVIKDMITGEQKKLNIEEI 430


>gi|228986403|ref|ZP_04146539.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228773224|gb|EEM21654.1| Histidyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 426

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 127/463 (27%), Positives = 210/463 (45%), Gaps = 40/463 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +  + + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              +T E  D + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GITEEMADTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    + P  G S G+  +  AL  
Sbjct: 280 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMHYPTVGISFGLDVIYTALSQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E     +     V I  +  +   L   Q          ++ E+ L + +     L YA
Sbjct: 332 KE----TVSSTADVFIIPLRTEIQCLQIAQQLCST---TSLKIELEL-AGRKLKRALNYA 383

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           ++ N P  +I G  E S     ++++ +G E+   + +  ++ 
Sbjct: 384 NKENIPYVLIIGEEELSTETAMLRNMKEGSEVKVPLSSLSNYL 426


>gi|255065193|ref|ZP_05317048.1| histidine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255050614|gb|EET46078.1| histidine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 431

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 100/493 (20%), Positives = 174/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D +      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDVVGRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  + +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWDKLGIRDYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRHEDKLDE--------DSKRRLKTNPLRVLDSKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +  +L  +          +++G                          +   + 
Sbjct: 227 CNAAPHLTDYLGEESRNHYSRFKAMLEGL-----------------------GIQYVENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQTLRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + GM+  KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGMVTFKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L+ T++
Sbjct: 414 QTVAADDLIHTLQ 426


>gi|123965923|ref|YP_001011004.1| histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166228595|sp|A2BVT6|SYH_PROM5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123200289|gb|ABM71897.1| Histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 429

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 94/437 (21%), Positives = 162/437 (37%), Gaps = 52/437 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           RG  D     +     +   I  +        I TP+LE ++   + + +  D  +K ++
Sbjct: 8   RGTVDLLPDNLIKWQNVEKIILELLLRASVKEIRTPILEMTELFMRGIGEGTDVVSKEMY 67

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           +  D   +  +LR + TA +AR + +N  +     + + +GP+FR E+   GR RQF Q 
Sbjct: 68  TFLDRGERSCTLRPEGTASVARAIIQNGISSKSLQKLWYMGPMFRYERPQAGRQRQFHQL 127

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            V+ +G  +  +D E+  +  D LE +GIK  +  I            +K  L    K  
Sbjct: 128 GVEFIGYDSVRSDIEIIALAWDILEKLGIKELNLEINTLGDFNDRSNFQKAFL----KWL 183

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E       +D  ++     +++   +     S           E    +  FLS    K 
Sbjct: 184 EVNKNDLDLDSQNRIVKNPLRIFDTKNAKTKS---------ILEDAPKLFDFLSEKSLKR 234

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
              + E++K                               +  +VRGL+YYT   +E   
Sbjct: 235 YINIKEMLK-----------------------LLKIPFIENFNLVRGLDYYTHTAFEIT- 270

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                          +V GGGRYD L+++  G   PA GF+I     +  L  L      
Sbjct: 271 -------SGALGSQATVCGGGRYDNLINQMGGTETPAIGFAI----GLERLILLAGKDLE 319

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 + I      ++ L      ++ LR   +  E+ L S  +F  Q K A++     
Sbjct: 320 ESRETDIYIVNKGFQAEIL--AIDLSRKLRNYDLIIELDL-SGASFSKQFKKANKLKSKS 376

Query: 432 AIIQGTGERSRGMLQIK 448
            II G  E  +   +I+
Sbjct: 377 IIIIGDDEALKNEFKIR 393


>gi|223040985|ref|ZP_03611245.1| histidyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222877741|gb|EEF12862.1| histidyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 415

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 92/462 (19%), Positives = 173/462 (37%), Gaps = 55/462 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               RG  D    +  +  RI+     + +NYG++ + +P LE +    + + +  D   
Sbjct: 2   ISALRGMKDVLPPQSGLYERIIKICEEVAKNYGYEFVLSPHLEQTALFRRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++  +D  G  + LR + TA + R   E  FD      R +  G +FR E+   GR R
Sbjct: 62  KEMYQFEDKGGNDVCLRPEGTAGVVRAFIEAKFDRTGGVRRYFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q   +  G  +   DA + +M+ +    +GIK       + +   +    +K+    
Sbjct: 122 EFHQFGCECFGEPSVYEDASVILMINEIFSRLGIKTKLLINSLGDAASMGAYRQKLVKFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D    +        D   +     +++L  + ++              E   +++  L+ 
Sbjct: 182 DAHEEQI-----CEDCKRRKLTNPIRVLDCKAQS---------CQKIYENAPLIIGSLND 227

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +      +L E++ G                            +I   +VRGL+YY    
Sbjct: 228 ECAGEFKKLQEILSGN-----------------------GVEFEIDPKLVRGLDYYCKTA 264

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          +     +V GGGRYD LV    G+     GF++GI R++  L   E
Sbjct: 265 FEFV--------SSEIGAKSAVAGGGRYDRLVEYLGGKASYGVGFAMGIERIMEILGGRE 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  +     +     D+D +         LR + I   +     K     L  AD 
Sbjct: 317 ------SQSARSGVYIGAMDADGVDAVYKIAINLRKS-IPVLVSY-EPKKLQKHLNAADN 368

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            N  + +  G  E   G + +KDL++  E + ++ + E+  +
Sbjct: 369 ANTRICLCVGEDELKSGKIWLKDLSEKAEKTLDLADLETELK 410


>gi|225077178|ref|ZP_03720377.1| hypothetical protein NEIFLAOT_02233 [Neisseria flavescens
           NRL30031/H210]
 gi|224951526|gb|EEG32735.1| hypothetical protein NEIFLAOT_02233 [Neisseria flavescens
           NRL30031/H210]
          Length = 431

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 99/497 (19%), Positives = 174/497 (35%), Gaps = 92/497 (18%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNLWTRAYGYRQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+           +     
Sbjct: 124 RPQRGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L       D+            D   +     +++L  +            
Sbjct: 184 AHRAALVEYLTHYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +V +L    +        ++ G                          + 
Sbjct: 223 LQEICNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +  +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ 
Sbjct: 260 VENPRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M
Sbjct: 312 GFAMGIERLLLLVGEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-M 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                ++   Q+K AD      A+I    E + G + +KD+                 + 
Sbjct: 367 QHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------QG 409

Query: 470 RVAQITIPISELVSTVK 486
           +  Q T+  ++L  T++
Sbjct: 410 KHEQQTVAAADLTDTLQ 426


>gi|296314654|ref|ZP_06864595.1| histidine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838563|gb|EFH22501.1| histidine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 431

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 101/493 (20%), Positives = 173/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L       +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVTYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +K       ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQKHYARFKAMLDGL-----------------------DIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR       M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQDFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 414 QTVAAEDLTHTLQ 426


>gi|320536997|ref|ZP_08036978.1| histidyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146147|gb|EFW37782.1| histidyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 442

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 128/474 (27%), Positives = 208/474 (43%), Gaps = 44/474 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           + A + +GF D   +    R  +++ +  ++   GF PI+TP LEYSD L +    E   
Sbjct: 5   ISARILKGFRDFLPEAEIRRALLIEKLTEVFREAGFVPIDTPALEYSDVLLRKSGGE--T 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K VF   D+ G+ ++LR+DLT P AR+VAE++  + FP + Y I  V+R EK   GRFR
Sbjct: 63  EKQVFRFTDNGGRDVALRFDLTVPFARFVAEHYSQLYFPFKRYHIAKVWRGEKPQAGRFR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+QCD D VGS A   D E+  +M  +L+A+G+  +   I +++R I +  L ++ L  
Sbjct: 123 EFVQCDFDIVGSDAACTDFEILKLMRQSLKAIGV--DKILIHVSHRAIFNRFLTRLQLTE 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                    VLR +DKL K G   V   L              A         ++S++  
Sbjct: 181 KS-----ADVLRIVDKLAKVGEAQVLEELT-------------ALSDEASAQKILSYIKG 222

Query: 247 DL----EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            +     +   +    ++    G     E +     +  +   +    +  +I RGL+YY
Sbjct: 223 GVPAVKPELFEQTLAYIEELAGGPAADTEHMREIYRLISALGINEFYVLDPSITRGLDYY 282

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG V+E  L              GSV  GGRYD L   +  +N+  TG SIG+ RL+  L
Sbjct: 283 TGVVFETFLTE--------LPEIGSVCSGGRYDNLTGLYMKENISGTGASIGLDRLLAGL 334

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + L       K+ G +           +++ Q     L   GI  E+F    K    Q  
Sbjct: 335 EQLGKI---NKDEGFISALVFCTGDADIARNQQIAAYLTEHGIPCEVFPD-PKKMAQQYT 390

Query: 423 YADRRNCPLAII----QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           YA++++ P  I      G+       + +K L    E    ++  +   + +  
Sbjct: 391 YAEKKHIPWGIFPETSAGS--IEDQQITLKHLPTRAEEKIPLRLAQEKIKTKAQ 442


>gi|325144119|gb|EGC66426.1| histidyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 431

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 102/493 (20%), Positives = 174/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL+  +    S   N        +  M     +  +   Y Q LRT G    M    
Sbjct: 316 GIERLLFLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRTQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 414 QTVAAEDLTHTLQ 426


>gi|261856775|ref|YP_003264058.1| histidyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261837244|gb|ACX97011.1| histidyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 430

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 92/484 (19%), Positives = 176/484 (36%), Gaps = 60/484 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +    +R+  ++     +YG+  I  P++E +    + +
Sbjct: 1   MSK----TIKTLRGMHDVLPGQTPGWSRLESTLSQTARHYGYQEIRMPIVEQTALFSRGI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   E+        + + IGP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFDDRNGDSLTLRPEGTASCVRACLEHGLIHNQQRKLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    D E+ +M +   + +GI      I            
Sbjct: 117 PQKGRYRQFHQFGVEAFGVNGAEMDVELMLMASRIWQQLGITDVQLQINTLGSSDARAAH 176

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                                           + +L E    ++ D  + A    E   +
Sbjct: 177 --------------------------------RAVLIEYLKSHADDLDEEARARLETNPL 204

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            +        +++      +   +  E        +  L+  +G       ++  +VRGL
Sbjct: 205 RILDSKNPAVQAVVAHAPALADYL-DEADRENFAEVQHLLTAAG---VSFVVNPRLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E +         +     G++  GGRYDGLV++  G+  PA GF++G+ RL+
Sbjct: 261 DYYNRTVFEWVT--------ESLGAQGTICAGGRYDGLVAQLGGKATPAAGFAMGLERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             +   +  +     +     +       +    +     LR   I+  +         N
Sbjct: 313 ELIGQADDESTADIYVLWPEPSAKGAALAAAEGLRRALPDLR---IQCALD---GGALKN 366

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           QLK ADR     A+I           ++K L     L+  ++          A   +  +
Sbjct: 367 QLKRADRSGARFAVII-EDTADADSWRVKSLR----LNAPLEPIPEAPLEPAAATALLRA 421

Query: 480 ELVS 483
           EL +
Sbjct: 422 ELAA 425


>gi|150017930|ref|YP_001310184.1| histidyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149904395|gb|ABR35228.1| histidyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 431

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 129/464 (27%), Positives = 213/464 (45%), Gaps = 37/464 (7%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLP 61
           K  K++  +  GF +   KE +I   I+  I  +YE  GF  I+ P++E S+  L K   
Sbjct: 2   KNNKIQPSILPGFMELLPKEQQIFKDIVRKITKVYEENGFLEIDIPVIEKSEVLLAKSAG 61

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +     K V+         +SLR+DLT P AR+ A+ F+ + FP + Y+IG V+R E++ 
Sbjct: 62  ET---EKQVYRFN-KGSNDLSLRFDLTVPFARFSAQYFNELTFPFKRYQIGKVYRGERNQ 117

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD+D +G++  + + +  ++   +     I    Y   I+NRKIL  +L  
Sbjct: 118 RGRYREFYQCDIDIIGNNRLSINNDAFVISMVSKGFKAIGLKKYKFQISNRKILSAVLND 177

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +      ++     VL  IDK DK G +  K  L E              +  E+ DI+ 
Sbjct: 178 L------EIVNATEVLILIDKYDKIGDEEFKKSLNEL-------------IGIEKADIIN 218

Query: 242 SFLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
             +++D   E  + +L  L   +   +KG  EL  + ++++  G   N   I+  I+RGL
Sbjct: 219 KIINLDGSNENILDQLKNLNFNSEEFKKGLEELEAVKKMLKTFGVGDNEYAINLKIIRGL 278

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG V+E  L             +GS+  GGRYD L   +  + +P  G SIG++RL 
Sbjct: 279 DYYTGTVFETFLMENEK--------YGSICSGGRYDNLAQNYTDKVLPGVGISIGLTRLF 330

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             LK +    +   E     +       ++L         L       E++L   K    
Sbjct: 331 FVLKEIGFLNSYKIEKSMEYLII--PIGNTLEYCAEIYIKLINKEKYVEIYLEDDK-LKK 387

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +L YA++      I+ G  E     ++IKD+  G+E   +I   
Sbjct: 388 KLNYANKLGVQKVILVGEDEELSKQVKIKDMISGEEKMVDIDGL 431


>gi|229097777|ref|ZP_04228732.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock3-29]
 gi|228685722|gb|EEL39645.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock3-29]
          Length = 428

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 124/458 (27%), Positives = 211/458 (46%), Gaps = 42/458 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D   K +++
Sbjct: 10  KGTKDYLPEEQVLRNKIKKACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 69

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           LQ+   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR+FIQCD
Sbjct: 70  LQNQGKRELALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 128

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  +     
Sbjct: 129 VDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQAINIPTE----L 181

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V+ ++DK++K G+ GV+  +             G  +T E  D + + +   L+ ++
Sbjct: 182 MSDVILSLDKIEKIGIDGVRKDIL------------GRGITEEMADTICNTVLSCLKLTI 229

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  E          G NEL  + + +     N N I  +  + RGL  YTG VYE  L 
Sbjct: 230 ADFKEAF-NNQLVTDGINELQQLQQYLIALRINENAI-FNPFLARGLTMYTGTVYEIFLK 287

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              +           +G GGRYD ++   R    N P  G S G+  +  AL   E+  +
Sbjct: 288 DGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQKETKPS 339

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYADRRNC 429
                    +  +   ++   +     Q LR+   ++ E+ L + +     L YA++ N 
Sbjct: 340 TAD------LFIIPLGTEL--QCLQIAQQLRSTTSLKIELEL-AGRKLKRALNYANKENI 390

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           P  +I G  E S   + ++++ +G  +   + +  ++ 
Sbjct: 391 PYVLIIGEEELSAETVMLRNMKEGSGVKVPLASLSNYL 428


>gi|240127823|ref|ZP_04740484.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268686218|ref|ZP_06153080.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626502|gb|EEZ58902.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 431

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 98/497 (19%), Positives = 173/497 (34%), Gaps = 92/497 (18%)

Query: 8   RAELPRGFADCPT-------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D                    D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVGQKDFKLTAVFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+           +     
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L +     D+            D   +     +++L  +            
Sbjct: 184 AHRAALVEYLTRYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +V +L    +        ++ G                          + 
Sbjct: 223 LQEICNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +S +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ 
Sbjct: 260 IENSRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +    S   N        +  M     +  +   Y Q LR  G    +
Sbjct: 312 GFAMGIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYVQALRAQGFNV-I 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                ++   Q+K AD      A+I    E + G + +KD+                   
Sbjct: 367 QHSGYQSLKAQMKKADNSGARFALIVAQDELADGTVTLKDM-----------------NG 409

Query: 470 RVAQITIPISELVSTVK 486
              Q T+  ++L  T++
Sbjct: 410 AHGQQTVSATDLTDTLQ 426


>gi|302419703|ref|XP_003007682.1| histidyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261353333|gb|EEY15761.1| histidyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 468

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 117/497 (23%), Positives = 203/497 (40%), Gaps = 54/497 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + + P+G  D   +++ +RN I D++    E +G  P++TP+ E  + L +   ++   +
Sbjct: 14  QLKTPKGTRDWVGQDLLLRNHIFDAL----ERHGGVPLDTPVFELQNILSEKYGED---S 66

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPGRF 125
           + +++L+D  G+  SLRYDLT P AR++A   D  +   + Y+I  V+R ++     GR 
Sbjct: 67  RLIYNLEDQGGEACSLRYDLTVPFARWLAMRSD--IQHIKRYQIAKVYRRDQPAVSRGRL 124

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F QCD D  G           + +   +           I +N+RKILD +    G+ 
Sbjct: 125 REFYQCDFDIAGIYDPMIPDAEILRIIAEVFQ--AFDMRITIKLNHRKILDALFAVAGVP 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D    +   +  A+DKLDK     VK  + E              L+ E  + +  ++ 
Sbjct: 183 YD----KIRPISSAVDKLDKMSWDEVKKEMIEK------------GLSEEAAEHVGLYVQ 226

Query: 246 IDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                    S  E    +      ++G  +L +++  +   G  S ++    ++ RGL+Y
Sbjct: 227 RSGTMREILSNLEADANLIMNQNVKEGVADLKLLATYIEAMGVGS-KVSFDLSLARGLDY 285

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG +YE +          +    GS+  GGRYD LV  +  + +P  G S GI R+   
Sbjct: 286 YTGLIYEIV----PDRINGQSTQVGSIAAGGRYDNLVGMYGRRPMPCVGISFGIDRIFTL 341

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L     S    +      +  M          L +     + L  AGI+AE         
Sbjct: 342 LAERCKSKKASELGRETDVYVMAFGDKDFEGLLVERMEVARQLWDAGIQAEFTAKVRPKP 401

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             Q         P+A+I G  E   G +++K L  G   +            +     + 
Sbjct: 402 QQQFSA--SEGAPVAVILGQEELDAGQVRVKQLHVGDRNAA----------QKDKGQLVA 449

Query: 478 ISELVSTVKKILQENKE 494
             +LV  V+ +L    E
Sbjct: 450 RRDLVEAVRALLASRIE 466


>gi|261392797|emb|CAX50373.1| histidyl-tRNA synthetase (histidine--tRNA ligase; HisRS) [Neisseria
           meningitidis 8013]
          Length = 431

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 100/493 (20%), Positives = 173/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E + I+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIITMSADLWEKLSIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGERADLQVMKYAQALRAQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 414 QTVAAEDLTHTLQ 426


>gi|42526950|ref|NP_972048.1| histidyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|46396585|sp|P60920|SYH_TREDE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|41817265|gb|AAS11959.1| histidyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 448

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 124/479 (25%), Positives = 215/479 (44%), Gaps = 48/479 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ ++ +GF D    +   R  +++ +  ++ +YGF PI+TP LEYS+ L +    E   
Sbjct: 5   IQPKVLKGFRDFLPADEIERALLMERLVKVFRDYGFVPIDTPALEYSEILLRKSGGE--T 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K VF   D+ G+ +++R+DLT PLAR+VAE+   I FP + Y +G V+R EK   GR+R
Sbjct: 63  EKQVFRFSDNGGRDVAMRFDLTVPLARFVAEHKSEIYFPFKRYHLGKVWRGEKPQAGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+QCD D +GS +   D E+  ++   L  +G+   ++ I +++R I +  L+ + L  
Sbjct: 123 EFLQCDFDTLGSDSAAVDFEILRLIKKALNELGVS--NFKIHVSHRGIFNRFLKSLNLSE 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D +      VLR +DKL K G   V  LL +               + E    +++++S 
Sbjct: 181 DSEE-----VLRIVDKLAKIGEDEVLKLLTDIS-------------SEESAKKILAYISG 222

Query: 247 DLE----KSMHELYELVKGTIAG-EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             +    +   +    ++    G ++    +  I  LV+  G   + I    +I RGL+Y
Sbjct: 223 VSKELKSEDFEKTLSHLENLAGGPDEDTKRMRDIYALVKAVGI-EDSIVFDPSITRGLDY 281

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG V+E  L              GSV  GGRYD L + +  + +   G SIG+ RL+ A
Sbjct: 282 YTGVVFETFLND--------LPSIGSVCSGGRYDNLTALYMKECITGVGASIGLDRLLAA 333

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+ L    +   +     +       D L              I AE++    K   +Q 
Sbjct: 334 LELLG---HQKTKASFTDLLIFSLPEDDLVLSYKIVNFFEAEKINAEVYP-EPKKMNHQY 389

Query: 422 KYADRRNCPLAIIQGTG----ERSRG----MLQIKDLAKGKELSREIKNNESWREARVA 472
            YA++++    +         E  +      +++KD+    E    +        A   
Sbjct: 390 TYAEKKDIRWGLFLDKDSCVEEFDKAPQRFKIKLKDMTNRTEDETPLSEAVKKIRASKN 448


>gi|194379338|dbj|BAG63635.1| unnamed protein product [Homo sapiens]
          Length = 469

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 109/434 (25%), Positives = 186/434 (42%), Gaps = 30/434 (6%)

Query: 45  IETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
           ++TP       +GK+  D    +K ++ L+D  G+ +SLRYDLT P ARY+A N  T + 
Sbjct: 56  LKTP---KETLMGKYGED----SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIK 108

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
                       N     GR+R+F QCD D  G+       +   +         ++  D
Sbjct: 109 RYHIA-KVYRRDNPAMTRGRYREFYQCDFDIAGNFD-PMIPDAECLKIMCEILSSLQIGD 166

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
           + + +N+R+ILDG+    G+       +   +  ++DKLDK   + VK            
Sbjct: 167 FLVKVNDRRILDGMFAICGVSDS----KFRTICSSVDKLDKVSWEEVK-----------N 211

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRK 281
           +      L  E  D +  ++      S+ E       +       +G  +L ++ E +  
Sbjct: 212 EMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTL 271

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VS 339
            G   ++I    ++ RGL+YYTG +YEA+L        ++P+  GSV  GGRYDGL  + 
Sbjct: 272 FGI-DDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMF 330

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             KG+ VP  G SIG+ R+   ++    +           +         L +       
Sbjct: 331 DPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKLLEERLKLVSE 390

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L  AGI+AE+    +    NQL+Y +    PL  I G  E   G+++++ +   +E+   
Sbjct: 391 LWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVR 450

Query: 460 IKNNESWREARVAQ 473
            ++     + R  Q
Sbjct: 451 REDLVEEIKRRTGQ 464


>gi|309379419|emb|CBX21986.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 431

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 98/497 (19%), Positives = 173/497 (34%), Gaps = 92/497 (18%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYGYRQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+           +     
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNRDERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L +     D+            D   +     +++L  +            
Sbjct: 184 AHRAALVEYLTRYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +V +L    +        ++ G                          + 
Sbjct: 223 LQEICNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +  +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ 
Sbjct: 260 IENPRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +    S   N        +  M     +  +   Y Q LR       M
Sbjct: 312 GFAMGIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQDFNV-M 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                ++   Q+K AD      A+I    E + G + +KD+                   
Sbjct: 367 QHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NG 409

Query: 470 RVAQITIPISELVSTVK 486
              Q T+  ++L +T++
Sbjct: 410 AHGQQTVAAADLTNTLQ 426


>gi|302336158|ref|YP_003801365.1| histidyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319998|gb|ADK68485.1| histidyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 437

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 101/476 (21%), Positives = 179/476 (37%), Gaps = 66/476 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
           A+  +G  D     +R    + D  R +   YGFD IETP +E  D+    +    D   
Sbjct: 2   AQRIQGTEDLFGGYMRAWQHMQDVARELLGTYGFDMIETPAIEQVDTFVHGIGASTDVVR 61

Query: 68  KGVFSLQD----------------DDGQWISLRYDLTAPLARYVAENF--DTIVFPCRTY 109
           K +F +                     Q +++R + TA + R   EN        P + +
Sbjct: 62  KEMFRVFSGALMERLLESGSEGGLKAKQRMAMRPEGTAGVVRAAVENNFVPQGGAPAKLW 121

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
             G +FR E+   GR RQF Q  V+ +G+S   ADAE  +M+ +  + +G       + I
Sbjct: 122 YAGAMFRGERPQKGRLRQFHQVGVEWLGASDPAADAESIIMLMEFYKRLGFPAERLQLRI 181

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           N+    +            +           D L++  +  ++    + + D   +    
Sbjct: 182 NSMGDAEC--RPAYRASVRQFILDHADEMCEDCLERAEINPLRAF--DCKNDRCREVMAT 237

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L  +        L         ++ + +                              
Sbjct: 238 APLAKDN-------LCDGCAIHYAKVKQYLDEA-----------------------GVTY 267

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
               T+VRGL+YYT  V+E                 G++GGGGRYDGL+    G+  P  
Sbjct: 268 VEDPTLVRGLDYYTRTVFEVECEGS---------RVGAIGGGGRYDGLMELEGGKPTPGI 318

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++G  R+ +AL+SL     +++   P  +      +         T  LR AG+R E 
Sbjct: 319 GFAVGFERMCLALRSLGV---DVEGEDPGCVYVACTSAAERDAVFSATLALRGAGVRTEA 375

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
                ++  +Q K AD+    L ++ G+ E + G+  ++D+   ++    +    +
Sbjct: 376 DY-QGRSLKSQFKQADKLGARLCVVLGSDEIAAGVATLRDMRTHEQGRVPMGELAA 430


>gi|163940978|ref|YP_001645862.1| histidyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163863175|gb|ABY44234.1| histidyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 431

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 125/456 (27%), Positives = 211/456 (46%), Gaps = 42/456 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D   K +++
Sbjct: 8   KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 67

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR+FIQCD
Sbjct: 68  LKDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 126

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  +     
Sbjct: 127 VDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQSINIPTE----L 179

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V+ ++DK++K G+ GV+  + E              +T E  D + + +   L+  +
Sbjct: 180 TSDVILSLDKIEKIGIDGVRKDVLER------------GITVEMADTICNTVLSCLKLPI 227

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  +    T+  + G  EL  + + +   G N N I  +  + RGL  YTG VYE  L 
Sbjct: 228 ADFKDTFNNTLVAD-GVEELQQLQQYLLALGINENTI-FNPFLARGLTMYTGTVYEIFLK 285

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              +           +G GGRYD ++   R    N P  G S G+  +  AL        
Sbjct: 286 NGTITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQK----- 332

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYADRRNC 429
                    +  +   ++   +     Q LR+   ++ E+ L + +     L YA++ N 
Sbjct: 333 -TTTSSTADLFIIPLGTEL--QCLQIAQQLRSTTSLKIELEL-AGRKLKRALNYANKENI 388

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           P  +I G  E S   + ++++ +G E+   + + E+
Sbjct: 389 PYVLIIGEEELSTETVVLRNMKEGTEVKIPLSSLEN 424


>gi|239998622|ref|ZP_04718546.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268594478|ref|ZP_06128645.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268547867|gb|EEZ43285.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
          Length = 431

 Score =  206 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 98/497 (19%), Positives = 173/497 (34%), Gaps = 92/497 (18%)

Query: 8   RAELPRGFADCPT-------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D                    D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVGQKDFKLTAVFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGI 169
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+           +     
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +R  L   L +     D+            D   +     +++L  +            
Sbjct: 184 AHRAALVEYLTRYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PD 222

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +V +L    +        ++ G                          + 
Sbjct: 223 LQEICNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQY 259

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
             +S +VRGL+YY   V+E            K     +V GGGRY+GL+    G+  P+ 
Sbjct: 260 IENSRLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYNGLIEELGGKPAPSI 311

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GF++GI RL++ +    S   N        +  M     +  +   Y Q LR  G    M
Sbjct: 312 GFAMGIERLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-M 366

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                ++   Q+K AD      A+I    E + G + +KD+                   
Sbjct: 367 QHSGYQSLKAQMKKADNSGARFALIVAQDELADGTVTLKDM-----------------NG 409

Query: 470 RVAQITIPISELVSTVK 486
              Q T+  ++L  T++
Sbjct: 410 AHGQQTVSATDLTDTLQ 426


>gi|203284061|ref|YP_002221801.1| histidyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083504|gb|ACH93095.1| histidyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 456

 Score =  206 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 131/479 (27%), Positives = 212/479 (44%), Gaps = 48/479 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +GF D   KE  IR  I+  I ++  +Y FD I+TP+LEYS+ L K     D  
Sbjct: 1   MDVRTLKGFRDYLPKEALIRTHIIKQIYSVLVSYNFDLIDTPILEYSEFLLKKGG--DEV 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+  + +S+R+DLT P AR++A N   I FP R  +IG VFR E    GR+R
Sbjct: 59  EKQIYRFKDNGDRDVSMRFDLTVPFARFMATNKSKIKFPFRRSQIGKVFRGENTQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMAD-----TLEAVGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D +G     +DAE+  ++        L  +      + I  ++  IL+  +EK
Sbjct: 119 EFMQFDFDILGEDTFRSDAEILSIVYCGLEEVFLNFIEGINIKFVIHFSHIGILNTYIEK 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +GL         + +LR IDKLDK G++ V+  L    ++               +D+++
Sbjct: 179 LGLKDKS-----IFILRNIDKLDKIGIEAVRENLLLELSEEH-------------VDLVL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+++D   +     + ++  +        +  I   +   G   +    +  IVRGL+Y
Sbjct: 221 EFVNLDG--TFSNKVKALRSILGDNDAVKRIEDIFVHLNALGI-QDAFNFNLKIVRGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLI 359
           YTG V+EA +           V  GS+  GGRYD L+S F G  Q V   G S GI R+ 
Sbjct: 278 YTGLVFEAEMLG---------VNMGSICSGGRYDNLLSLFSGSLQKVSGVGGSFGIDRIQ 328

Query: 360 VALK-SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT------AGIRAEMFLG 412
             ++    +            +  ++ D      Y       R         I  E++  
Sbjct: 329 DIIEIDKFNYIKLFVVKASSRVLIVNIDDTLQDYYYKLADKFRRHDYSKINNIACEVYPK 388

Query: 413 S--SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           S   KN   Q++YA  +     I  G  E   G L+++DL K +EL         + + 
Sbjct: 389 SKDGKNIKIQIEYALAKAIRFLIFVGQEEYQEGKLKVRDLTKKEELLLSFDEAIKFIKG 447


>gi|94987428|ref|YP_595361.1| histidyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731677|emb|CAJ55040.1| Histidyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 419

 Score =  206 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 91/461 (19%), Positives = 172/461 (37%), Gaps = 54/461 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
                +GF+D    E  + + I  + R I+  Y ++ +  PLLE ++   + +  + D  
Sbjct: 4   IITAIKGFSDLFQPESNMFSYIEHTARAIFSLYNYEELRIPLLERTELFCRSIGLETDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRF 125
            K +++  D   + ++LR + TA + R   EN         +   IGP+FR E+   GR 
Sbjct: 64  QKEMYTFLDRKNRSLTLRPEATASIIRAYIENKKYTQEAVSKFLSIGPMFRYERPQKGRM 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q + + +G +    DAE+ +M+   L A+ IK     I          + + I   
Sbjct: 124 RQFHQVNCECLGVTDSYIDAEIIIMLMQFLTALEIKDIRLEINSLGCADCRPLYKDILQK 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D+L          D   +     +++L  +                + Q    + +  
Sbjct: 184 WLDQL---DTQTLCDDCQRRKETNPLRVLDCKVSFCKEK---------TSQAPHFLDYQC 231

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                    +  L+                          +    I+  +VRGL+YY   
Sbjct: 232 KTCLDQFSTVTTLLS-----------------------LENIPYIINHRLVRGLDYYMRT 268

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E I               G++ GGGRY+GLV++  G ++P  GF+ G+ RL + L   
Sbjct: 269 TFEVI--------SSNIGSQGAIAGGGRYNGLVAQLGGPDIPGIGFACGMERLALLLPRK 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +                    ++   K    +  L  AG   EM      +  + +++A+
Sbjct: 321 DL--------PRPDFMIGVFIAEGKDKAFSISSQLHKAGFSGEMLFNLG-SMKSLMRHAN 371

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +      ++ GT E +   + IK++  G +    +    S+
Sbjct: 372 KARVRYCLLLGTEELALNSISIKNMDTGVQEKISLDKVSSY 412


>gi|225849034|ref|YP_002729198.1| histidyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643080|gb|ACN98130.1| histidyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 409

 Score =  206 bits (523), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 95/451 (21%), Positives = 171/451 (37%), Gaps = 62/451 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RGF D   +  +    I+D+ R  +E Y F  I  P +E      + + +  D  
Sbjct: 3   KIQKVRGFQDIYGENAKKYRYIVDTFRETFEKYNFKEIILPFVEDISLFKRSVGEATDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRF 125
            K ++   D  G+ ++LR + TA   R   E            +  G +FR E+   GR+
Sbjct: 63  QKEMYVFLDKGGREVALRPEGTASCVRAYIEEKMYAEGGYHKLFYEGAMFRYERPQAGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   +  G S+  AD E+  M+   L+ + I        + + +      +++  +
Sbjct: 123 RQFHQIGAEIFGVSSVLADTELISMVYKILKKLKIDFKLEINSLGDFQSRKTYTQELIKY 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                N             +     +++L  +          +     ++    ++ +LS
Sbjct: 183 LKQYENGLCETC-----KSRINTNPLRVLDCK---------VESCKQITKDAPKIIDYLS 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + EK   +L E +K                         +     +  +VRGL+YYT  
Sbjct: 229 EESEKRFTQLKEYLKAL-----------------------NIDFVENPRLVRGLDYYTDT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            +    G+V  GGRYD LV +  G   PA GF+ GI RLI+ +K L
Sbjct: 266 VFEFTT--------DQIGAQGTVAAGGRYDNLVEQLGGPPTPALGFAAGIERLILLVKDL 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                        LIT +    D   +   +++ LR +GI+ E  L    +  + +K AD
Sbjct: 318 --------PSEKPLITVIPLTPDYNIQALSFSESLRNSGIKTETLLKEG-SLKSMMKTAD 368

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           +      +            ++K++  G + 
Sbjct: 369 KLKSDYVVFI------SDKYELKEMKSGNQE 393


>gi|121634630|ref|YP_974875.1| histidyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166228588|sp|A1KT95|SYH_NEIMF RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|120866336|emb|CAM10078.1| putative histidyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|308389027|gb|ADO31347.1| putative histidyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 431

 Score =  206 bits (523), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 102/493 (20%), Positives = 175/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYGYRQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LRT G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGERADLQVMKYAQALRTQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 414 QTVAAEDLTHTLQ 426


>gi|229168072|ref|ZP_04295800.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH621]
 gi|228615316|gb|EEK72413.1| Histidyl-tRNA synthetase 1 [Bacillus cereus AH621]
          Length = 431

 Score =  206 bits (523), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 128/456 (28%), Positives = 213/456 (46%), Gaps = 42/456 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D   K +++
Sbjct: 8   KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 67

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L+D   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR+FIQCD
Sbjct: 68  LKDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 126

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  +     
Sbjct: 127 VDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQSINIPTE----L 179

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V+ ++DK++K G+ GV+  + E              +T E  D + + +   L+  +
Sbjct: 180 TSDVILSLDKIEKIGIDGVRKDVLER------------GITVEMADTICNTVLSCLKLPI 227

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  +    T+  + G  EL  + + +   G N N I  +  + RGL  YTG VYE  L 
Sbjct: 228 ADFKDTFNNTLVAD-GVKELQQLQQYLLALGINENTI-FNPFLARGLTMYTGTVYEIFLK 285

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              +           +G GGRYD ++   R    N P  G S G+  +  AL   E    
Sbjct: 286 DGTITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQKE---- 333

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYADRRNC 429
            I     + I  +  +     +     Q LR+   ++ E+ L + +     L YA++ N 
Sbjct: 334 TISSTADLFIIPLGTE----LQCLQIAQQLRSTTSLKIELEL-AGRKLKRALNYANKENI 388

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           P  +I G  E S   + ++++ +G E+   + + E+
Sbjct: 389 PYVLIIGEEELSTETVVLRNMKEGTEVKIPLSSLEN 424


>gi|325474011|gb|EGC77199.1| histidyl-tRNA synthetase [Treponema denticola F0402]
          Length = 448

 Score =  206 bits (523), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 127/479 (26%), Positives = 216/479 (45%), Gaps = 48/479 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ ++ +GF D    +   R  +++ +  ++ +YGF PI+TP LEYS+ L +    E   
Sbjct: 5   IQPKVLKGFRDFLPADEIERALLMERLVKVFRDYGFVPIDTPALEYSEILLRKSGGE--T 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K VF   D+ G+ +++R+DLT PLAR+VAE+   I FP + Y +G V+R EK   GR+R
Sbjct: 63  EKQVFRFSDNGGRDVAMRFDLTVPLARFVAEHKSEIYFPFKRYHLGKVWRGEKPQAGRYR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+QCD D +GS +   D E+  ++   L  +G+     H+  ++R I +  L+ + L  
Sbjct: 123 EFLQCDFDTLGSDSAAVDFEILRLIKKALNELGVSGFKIHV--SHRGIFNRFLKSLNLAE 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D +      VLR +DKL K G   V  LL +               + E    +++++S 
Sbjct: 181 DSEE-----VLRIVDKLAKIGEDEVLKLLTDIS-------------SEESAKKILAYISG 222

Query: 247 DLE----KSMHELYELVKGTIAG-EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             +    +   +    ++    G ++    +  I  LV+  G   + I    +I RGL+Y
Sbjct: 223 VSKDLKSEDFEKTLSHLENLAGGPDEDTKRMRDIYSLVKAVGI-EDSIVFDPSITRGLDY 281

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG V+E  L              GSV  GGRYD L + +  + +   G SIG+ RL+ A
Sbjct: 282 YTGVVFETFLTD--------LPSIGSVCSGGRYDNLTALYMKECITGVGASIGLDRLLAA 333

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+ L            +LI ++  D   LS             I AE++    K   +Q 
Sbjct: 334 LELLGRQKTK-ASFTDLLIFSLPEDDQVLS--YKIVNFFEAEKINAEVYP-EPKKMNHQY 389

Query: 422 KYADRRNCPLAIIQGTG----ERSRG----MLQIKDLAKGKELSREIKNNESWREARVA 472
            YA++++    +         E  +      +++KD+    E    +        A   
Sbjct: 390 TYAEKKDIRWGLFLDKDSCVEEFDKAPQRFKIKLKDMTNRTEDEIPLSEAVKKIRASKN 448


>gi|203287600|ref|YP_002222615.1| histidyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201084820|gb|ACH94394.1| histidyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 456

 Score =  206 bits (523), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 131/479 (27%), Positives = 212/479 (44%), Gaps = 48/479 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +GF D   KE  IR  I+  I ++  +Y FD I+TP+LEYS+ L K     D  
Sbjct: 1   MDVRTLKGFRDYLPKEALIRTHIIKQIYSVLVSYNFDLIDTPILEYSEFLLKKGG--DEV 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+  + +S+R+DLT P AR++A N   I FP R  +IG VFR E    GR+R
Sbjct: 59  EKQIYRFKDNGDRDVSMRFDLTVPFARFMATNKSKIKFPFRRSQIGKVFRGENTQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMAD-----TLEAVGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D +G     +DAE+  ++        L  +      + I  ++  IL+  +EK
Sbjct: 119 EFMQFDFDILGEDTFRSDAEILSIVYCGLEEVFLNFIEGINIKFVIHFSHIGILNTYIEK 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +GL         + +LR IDKLDK G++ V+  L    ++               +D+++
Sbjct: 179 LGLKDKS-----IFILRNIDKLDKIGIEAVRENLLLELSEEH-------------VDLVL 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+++D   +     + ++  +        +  I   +   G   +    +  IVRGL+Y
Sbjct: 221 EFVNLDG--TFSNKVKALRSILGDNNAVKRIEDIFVHLNALGI-QDAFNFNLKIVRGLDY 277

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLI 359
           YTG V+EA +           V  GS+  GGRYD L+S F G  Q V   G S GI R+ 
Sbjct: 278 YTGLVFEAEMLG---------VNMGSICSGGRYDNLLSLFSGSLQKVSGVGGSFGIDRIQ 328

Query: 360 VALK-SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT------AGIRAEMFLG 412
             ++    +            +  ++ D      Y       R         I  E++  
Sbjct: 329 DIIEIDKFNYIKLFVVKASSRVLIVNIDDTLQDYYYKLADKFRRHDYSKINNIACEVYPK 388

Query: 413 S--SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           S   KN   Q++YA  +     I  G  E   G L+++DL K +EL         + + 
Sbjct: 389 SKDGKNIKIQIEYALAKAIRFLIFVGQEEYQEGKLKVRDLTKKEELLLSFDEAIKFIKG 447


>gi|325127949|gb|EGC50850.1| histidyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 431

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 102/493 (20%), Positives = 175/493 (35%), Gaps = 84/493 (17%)

Query: 8   RAELPRGFADCPTKE-------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           + +  +G  D    E               D++      YG+  I TP++E +    + +
Sbjct: 4   KIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYRQIRTPIVEQTGLFVRSI 63

Query: 61  PD-EDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +  D   K +++  D +       R + TA   R V E+      P + + +GP+FR E
Sbjct: 64  GEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR+RQF Q  ++ +G      DAE+  M AD  E +GI+       +       R 
Sbjct: 124 RPQKGRYRQFHQVGIEALGFEGPDIDAEIVAMSADLWEKLGIREYLTLEINSLGNREERA 183

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L +     +DKL+E        D   +     +++L  +                
Sbjct: 184 AHRAALVEYLTRYEDKLDE--------DSKRRLKTNPLRVLDTKN---------PDLQEI 226

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +V +L    +        ++ G                          +   + 
Sbjct: 227 CNAAPRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENP 263

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++
Sbjct: 264 RLVRGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAM 315

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           GI RL++ +    S   N        +  M     +  +   Y Q LRT G    M    
Sbjct: 316 GIERLLLLVSEYGSLEVNAAPD----VYAMHQGERADLQVMKYAQALRTQGFNV-MQHSG 370

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++   Q+K AD      A+I    E + G + +KD+                      Q
Sbjct: 371 YQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDM-----------------NGAHGQ 413

Query: 474 ITIPISELVSTVK 486
            T+   +L  T++
Sbjct: 414 QTVAAEDLTHTLQ 426


>gi|327439027|dbj|BAK15392.1| histidyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 422

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 121/458 (26%), Positives = 208/458 (45%), Gaps = 40/458 (8%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+  +  +G  D    +  +R  I  ++ + +  YG  P+ETP+L Y++ +        
Sbjct: 2   KKMDYQNVKGTQDYLPAQEVVRRNIRRTLEDTFMLYGCKPLETPILNYTELMASKYAGGA 61

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              K +++L D   + ++LRYDLT P A+ +A N   +  P + Y IG VFR+     GR
Sbjct: 62  EILKEMYTLTDRGERDLALRYDLTIPFAKVIAMN-PKLSMPFKRYEIGKVFRDGPIKAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           FR+F QCDVD VG  +++A+AE+ +M  D    + I   +  I  NNRK+L G+L+   +
Sbjct: 121 FREFTQCDVDVVGIESQSAEAELMVMTIDAFNKLNI---EMLIQFNNRKLLAGLLQYFKV 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                  +   V+  +DK++K     +   L E             NL+   I+++  FL
Sbjct: 178 P----QLKINSVILILDKMEKIDQVTLLKELEEQ------------NLSPSTIELIKQFL 221

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + +   ++    +  +     ++G+ EL+ + + ++      N +  +  + RGLE YTG
Sbjct: 222 NANP--TIAYFEKYREENELIKQGYEELIELQDYLQVLNVGENCV-FNPFLARGLEIYTG 278

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS--RFKGQNVPATGFSIGISRLIVAL 362
            +YE  L    +          S+GGGGRYD  +       +     G S G+  +  A+
Sbjct: 279 SIYELFLKDGAIK--------SSIGGGGRYDNAIGGLIGSEEKFSTVGISFGLDVIYTAM 330

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  E    N  +   V I  +    ++  +       LR  G R E+ L S K     ++
Sbjct: 331 EQRE----NSADQALVDIFIIPL--NTQKEALRLAWQLRQQGNRVEVEL-SGKKLRKAME 383

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
            A+R N    II G  E   G  ++KD+  G+    EI
Sbjct: 384 KANRENIRKVIILGENEMKSGRYEMKDMQTGEVEQFEI 421


>gi|313680017|ref|YP_004057756.1| histidyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152732|gb|ADR36583.1| histidyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 420

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 98/470 (20%), Positives = 183/470 (38%), Gaps = 57/470 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D     +     ++++ R   E  G + I TP+ E+++   + +    D   
Sbjct: 2   IRAVKGTHDLLGTALAYHRTVVEATRRWAEAAGAEEIATPIFEHTEVFERGVGRTTDIVQ 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +F+  D  G+ ++LR + TA + R   E+       P R +  GP+FR E+   GR R
Sbjct: 62  KEMFTFSDRGGRSLTLRPEGTAGVVRAYLEHGMKVWPQPVRLWYAGPMFRAERPQKGRQR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND----YHIGINNRKILDGILEKI 182
           QF Q   + +G++    DAE  ++    L  +G+ R            +R   +  L + 
Sbjct: 122 QFHQTGYEVIGAAEPEVDAEAVVLSWRILAGLGLSRMRLKLGSVGDAEDRARYNAYLRER 181

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                 +L+E        D   +     +++L  +   D          L + ++  M+ 
Sbjct: 182 LAPHAQRLSE--------DSRRRLETNPMRILDSKAEADRRL-------LEALEVRPMLD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL                    GE        +   +R  G      ++  TIVRGL+YY
Sbjct: 227 FL--------------------GEAARAHFEAVQARLRALGVP---FEVDPTIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E           +      ++GGGGRYDGL     G   P  G+++G+ R+ +A+
Sbjct: 264 VRTSWEI--------HHELLGAQSALGGGGRYDGLSELLGGPPAPGVGWALGVERVALAM 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++   S      +    +  +  + D + +            +R +  L + +  G  L+
Sbjct: 316 EAEGLSPAPAPGLD---LYVVPLEPDLVPRALEMAAHFWPE-LRVQYALKARR-PGKGLQ 370

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+R+    A + G+ E + G L +KDL  G++ +      + W     A
Sbjct: 371 EAERKGARFAGLLGSDEAAAGTLTVKDLKTGQQRTLRPDEVKEWIRGGTA 420


>gi|257453872|ref|ZP_05619150.1| histidyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257448799|gb|EEV23764.1| histidyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 432

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 95/482 (19%), Positives = 172/482 (35%), Gaps = 74/482 (15%)

Query: 9   AELPRGFADCPTKE------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
            +  +GF D    E           ++  ++ ++   +GF+ I  P++E +    + + D
Sbjct: 2   LKSIKGFNDILHIETESTRPSSEWRQLESTLVDVLNQFGFEQIRLPIVEETQLFARAIGD 61

Query: 63  -EDRPNKGVFSLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             D  +K ++S  D       ++LR + TA   R V E+        + + IGP+FR E+
Sbjct: 62  ATDIVDKEMYSFYDKSNPPTALTLRPEGTAGAVRAVVEHNLLRGDNPKLWYIGPMFRYEQ 121

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK-----RNDYHIGINNRKI 174
              GR+RQF Q  V++ GS    ADAE+ +M     + +GI        +    I+ R  
Sbjct: 122 PQKGRYRQFHQLGVESFGSELADADAELIIMTYQMWQKLGILDVVQLEINSLGEIDERLS 181

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L         +L+E        D   +     +++L  + +               
Sbjct: 182 YRKALVDFLTDKKSQLDE--------DSQRRLTTNPLRILDSKDKNTQQ---------IL 224

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E    +  FL    ++    L   +K                              I+  
Sbjct: 225 ENAPKLADFLGAASQQHFEALQHYLKA-----------------------VGINFVINPK 261

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATG-- 350
           +VRGL+YY   V+E            +     +V  GGRYDGL+ + K    + PA    
Sbjct: 262 LVRGLDYYNKTVFEWTT--------DQLGSQATVCAGGRYDGLIGQIKSIGSDKPAASEP 313

Query: 351 -FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR--TAGIRA 407
                +    + L   +           V +       D  +    +   LR   + +R 
Sbjct: 314 AVGFAMGLERLLLLMQKVQPFEATPACDVFVVAHP---DVYTDAIKFAHELRTRRSNLRV 370

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           +M   S+ +   Q+K AD+    L++I    E +   + IK +A G +++       S  
Sbjct: 371 KMA--SATSLKAQMKKADKSGAQLSVIIAQDEVANQQITIKKMATGDQITVASDMLFSEN 428

Query: 468 EA 469
             
Sbjct: 429 PD 430


>gi|78777328|ref|YP_393643.1| histidyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|123754715|sp|Q30RH3|SYH_SULDN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|78497868|gb|ABB44408.1| histidyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 403

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 99/452 (21%), Positives = 164/452 (36%), Gaps = 57/452 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               RG  D  +++       +     I + YGF  IETPLLE +    + + +  D   
Sbjct: 2   ISSLRGMNDILSEDYERFTHFITVATKIAQRYGFHFIETPLLEETALFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRFR 126
           K ++   D     + LR + TA + R   +            +  G +FR E+   GR R
Sbjct: 62  KEMYQFVDKGENDVCLRPEGTAGVVRAFVQKKLDRAGGIHRFFYHGAMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V++ G S+   DA M MM +D L+ +GI        +   + +    EK+    
Sbjct: 122 QFHQFGVESFGESSVYEDASMIMMASDILKELGIGYRLQLNSLGCNECMPPYREKLINFV 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
               +E        D   +     +++L  +     S            +   +++ L  
Sbjct: 182 TKHKDEI-----CEDCTRRVETNPIRVLDCKNEKCQS---------IYTEAPKLLNCLCS 227

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             E     L  ++K      +    L                       VRGL+YY+   
Sbjct: 228 TCESDFTTLKMILKQNEIDFEIDTNL-----------------------VRGLDYYSKTA 264

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +                ++ GGGRYD LV    G+  PA GF++GI RL+  +    
Sbjct: 265 FEFV--------SDNIGSQSAIAGGGRYDRLVEFLDGRPTPAVGFAMGIERLMELI---- 312

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                + E           D ++L       Q  R + I   +   + KN  N LK AD+
Sbjct: 313 ----IMPEAKKDGYYLGAMDDEALDMIVKIAQKKRKSDI-VILEYKT-KNLKNHLKAADK 366

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            N     + G+ E   G + +K+L    E + 
Sbjct: 367 SNAKYCAVIGSNEIKDGTIWVKNLEDKTEKTI 398


>gi|224531959|ref|ZP_03672591.1| histidyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511424|gb|EEF81830.1| histidyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 457

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 120/472 (25%), Positives = 199/472 (42%), Gaps = 47/472 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +GF D   K+  IR  I+  I +I  +Y FD I+TP+LEYS+ L K     D  
Sbjct: 1   MDIKTLKGFKDYLPKDSLIRIHIVRQIFSILNSYNFDLIDTPVLEYSELLLKKGG--DEA 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D+ G+ +S+R+DLT P AR++A N  ++ FP R  + G VFR E    GR+R
Sbjct: 59  EKQIYRFKDNGGRDVSMRFDLTVPFARFIATNISSLKFPFRRSQFGKVFRGENSQKGRYR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA-----VGIKRNDYHIGINNRKILDGILEK 181
           +F+Q D D VG  +   DAE+  ++   LE      +      + I  ++  IL+   E+
Sbjct: 119 EFMQFDFDIVGEDSFRGDAEILSVVYYGLEEIFLNFIEGINKKFIIHYSHLGILNSFFEQ 178

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +G+         L +LR IDK+D+ G+  VK  L     + + D               +
Sbjct: 179 LGIKEKS-----LFILRNIDKIDRIGIDKVKEELLLEIEEEAVDLILS-----------L 222

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             L    +  +  L  ++       K   ++     L++      +   ++  I RGL+Y
Sbjct: 223 MDLQGTFKDKIQTLKSILGDNNESIKRVEDVFKHLSLLKI----QDSFNLNLKIARGLDY 278

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI-- 359
           YTG V+E+ +              GSV  GGRYD LVS F       +G           
Sbjct: 279 YTGIVFESEVFGS---------NMGSVCSGGRYDNLVSSFSNSIQKVSGVGGSFGVDRIK 329

Query: 360 -VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA------GIRAEMFL- 411
            +      S            +  ++ DS   + Y       R         I  E++  
Sbjct: 330 DIIDLEKFSYIKIFVTKARSKVLIVNLDSALQNYYYELATRFRNHDYSKIKNISCEVYFK 389

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             + KN   Q++YA  +     +  G  E     ++++DL K +EL    + 
Sbjct: 390 NKNGKNIKEQIEYALSKEIRFLVFVGQEEYKENKMKVRDLTKKEELLLTFEE 441


>gi|152992944|ref|YP_001358665.1| histidyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166228623|sp|A6Q9Z9|SYH_SULNB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|151424805|dbj|BAF72308.1| histidyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 403

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 94/457 (20%), Positives = 171/457 (37%), Gaps = 57/457 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               RG  D    E +    I+ +   I + YG+  IETP+LE +    + + D  D  +
Sbjct: 2   INPLRGMKDLTFDEAQRFVHIVKTAITIAKRYGYSYIETPILEETALFKRSVGDSSDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++  +D  G  + +R + TA + R       D      + Y  GP+FR E+   GR R
Sbjct: 62  KEMYQFEDKGGNDVCMRPEGTAGVVRAFISAKLDRQPVKQKFYYYGPMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q   ++ G ++   D  + +M++   +A+GI        +   + +    + +    
Sbjct: 122 EFHQFGCESFGEASVYEDFTIIIMISQIFQALGIGFELKINSLGCPECMPPYRQNLVGFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +   +        D   + G+  +++L  +     S           +Q   ++  L  
Sbjct: 182 TEISEDL-----CTDCNRRIGMNPIRVLDCKNEACQS---------LLKQSPKLIENLCE 227

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +    +L  L+       +    L                       VRGL+YY    
Sbjct: 228 HCDTDFKKLTVLLDDAGIAYEVDTNL-----------------------VRGLDYYNKTA 264

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +                ++ GGGRYD LV    G+  PA GF+IGI R++  ++   
Sbjct: 265 FEFVSNE--------IGSQSAIAGGGRYDKLVEYLDGKPTPAVGFAIGIERIMELVQ--- 313

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                + E             +++ K  M     R    +  +   SSK F + +K  D+
Sbjct: 314 -----MPETKKEGYYMGAMIPEAIEKIIMLGNRKRATD-KVTVEY-SSKGFKSHMKGVDK 366

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            N   A++ G  E   G + +KDL   +E S  +   
Sbjct: 367 ANARYALLIGEDELKNGTVWLKDLETKEEKSILLSEV 403


>gi|326928219|ref|XP_003210278.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 403

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 112/442 (25%), Positives = 189/442 (42%), Gaps = 45/442 (10%)

Query: 55  SLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            + K+  D    ++ ++ LQD  G+ ++LRYDLT P ARY+A N  T +           
Sbjct: 2   LMEKYGDD----SRLIYELQDQGGELLALRYDLTVPFARYLAMNKITNIKRYHIA-KVYR 56

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
             N     GR+R+F QCD D  G          C+ +   + +  ++  D+ I +N+R+I
Sbjct: 57  RDNPATTRGRYREFYQCDFDIAGQFDPMIPDAECLKILHEILS-ELQIGDFLIKVNDRRI 115

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L+G+    G+     L         +DKLDK   + V+            +      L+ 
Sbjct: 116 LNGMFAICGIPESKLLTL----CSTLDKLDKMPWEEVR-----------SEMVGEKGLSP 160

Query: 235 EQIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           E  D +  ++ +     + E       +      ++G  ++ ++ E +   G  + ++  
Sbjct: 161 EAADRIGEYVQLHGGMDLIEQLLQDPKLSQNKLAKEGLGDMKLLFEYLTLFGI-AGKVSF 219

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPAT 349
             ++ RGL+YYTG +YEA+L     +  ++ V  GSV GGGRYDGL  +   KG+ VP  
Sbjct: 220 DLSLARGLDYYTGVIYEAVLLQQENDHGEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCV 279

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G SIGI R+   L+    ++          +         LS        L  AGI+AEM
Sbjct: 280 GVSIGIERIFSILEHRMKASGEKVRTTETQVMVATPQKHLLSARLKLISELWDAGIKAEM 339

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                     QL+Y +    PL  I G  E   G+++++D+A  +E+             
Sbjct: 340 MYRKDPKLLKQLQYCEDTGIPLVAIIGEQELRDGVVKLRDVATREEVD------------ 387

Query: 470 RVAQITIPISELVSTVKKILQE 491
                 IP  EL + +++ L  
Sbjct: 388 ------IPREELAAEIRRRLVR 403


>gi|329942395|ref|ZP_08291205.1| histidyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328815305|gb|EGF85293.1| histidyl-tRNA synthetase [Chlamydophila psittaci Cal10]
          Length = 409

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 101/441 (22%), Positives = 178/441 (40%), Gaps = 49/441 (11%)

Query: 25  IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
           + +R+ D I ++   YGF  I TP+ E S+         D   K +++  D  G+ ++LR
Sbjct: 7   LWHRVEDVIHDVCSLYGFSEIRTPVFEKSEVFLHVGEQSDIVKKEMYTFLDKKGRSLTLR 66

Query: 85  YDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
            + TAP+ R   +N        + Y I P+FR E+   GR+RQ  Q  V+ +G      D
Sbjct: 67  PEGTAPIVRSFIDNPMNQRDDNKFYYILPMFRYERQQSGRYRQHHQFGVEALGVRHPLRD 126

Query: 145 AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
           AE+  ++     AVG++     +     +      +KI      +     +   +    +
Sbjct: 127 AEILALLWHFYSAVGLQHMQVQLNFLGGEATRKRYDKIL----REYFHDHLSSLSSLSKE 182

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA 264
           +F    +++L  +   D             +    ++ ++S D  K   E+   ++    
Sbjct: 183 RFNTNLLRILDSKEPEDQE---------IIKSAPPILDYISDDDHKYFDEILSALRDL-- 231

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
                                +    I+  +VRGL+YYT  V+EA+  +   +       
Sbjct: 232 ---------------------NISYDINPRLVRGLDYYTDVVFEAVTTYGGHSYA----- 265

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
              +GGGGRYDGL++   G + PA GF IG+ R+I  L +      N   +    +  + 
Sbjct: 266 ---LGGGGRYDGLIASSGGLSTPACGFGIGLERVIQTLLAQG----NFTPLSSHKLRLIP 318

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            +  + S   ++ Q LR+ GI  E+   + K     LK AD          G  E     
Sbjct: 319 VEPQADSFCFVWAQHLRSLGIPTEVDW-THKKLKTALKIADAEKATFVCPVGERELVSEQ 377

Query: 445 LQIKDLAKGKELSREIKNNES 465
           L +K+++  KE S   +  E 
Sbjct: 378 LTVKNMSLHKEFSGSKQEVEQ 398


>gi|218904467|ref|YP_002452301.1| histidyl-tRNA synthetase [Bacillus cereus AH820]
 gi|229122860|ref|ZP_04252068.1| Histidyl-tRNA synthetase 1 [Bacillus cereus 95/8201]
 gi|218538365|gb|ACK90763.1| histidyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228660444|gb|EEL16076.1| Histidyl-tRNA synthetase 1 [Bacillus cereus 95/8201]
          Length = 426

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 129/463 (27%), Positives = 209/463 (45%), Gaps = 40/463 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRALALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQAINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              +T E  D + + +  
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLER------------GITEEMADTICNTVLS 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ ++ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 222 CLKLTIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENAI-FNPFLARGLTMYTGTV 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 280 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 331

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E     I     V I  +  +   L   Q          ++ E+ L + +     L YA
Sbjct: 332 KE----TISSTADVFIIPLGTELQCLQLAQQLRST---TSLKVELEL-AGRKLKRALNYA 383

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           ++ N P  +I G  E S     ++++ +G E+   + +  ++ 
Sbjct: 384 NKENIPYVLIIGEEELSTETAMLRNMKEGSEVKVPLSSLSNYL 426


>gi|166154758|ref|YP_001654876.1| histidyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155633|ref|YP_001653888.1| histidyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336032|ref|ZP_07224276.1| histidyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|229558646|sp|B0B8B7|SYH_CHLT2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229558647|sp|B0B9Z6|SYH_CHLTB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|165930746|emb|CAP04243.1| histidyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931621|emb|CAP07197.1| histidyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 428

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 99/467 (21%), Positives = 183/467 (39%), Gaps = 63/467 (13%)

Query: 7   LRAELPRGFADCPT---------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +   LP+G  D            +   +  R+  +   I   YGFD I TP+ E +++  
Sbjct: 1   MSNALPKGVFDIFPYVTSPKNLWRNSSLWKRVEHAAHRICNLYGFDEIRTPVFEKTETFL 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           +     D   K V++  D  G+ ++LR + TA + R + ++   +    + Y I P+FR 
Sbjct: 61  RVGEHSDIVKKEVYTFLDKKGRSLTLRPEGTAAVVRALLDHSADMRKDNKFYYILPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q  ++ +G      DAE+  ++ D   AVG++    H+     +    
Sbjct: 121 ERQQSGRYRQHHQFGLEAIGVRHPLRDAEVLSLLWDFYAAVGLQHMQIHVNFLGGQKTRA 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             ++       K  +RL  L      +++    +++L  +   D             E+ 
Sbjct: 181 RYDEALREFFRKDLDRLSPLS----QERYHANLLRILDSKEPEDQEFI---------EKA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ ++                          +L     ++ +         I+  +VR
Sbjct: 228 PSILDYIDD-----------------------RDLSYFDAVLAQLKALGIPFAINPRLVR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYT  V+EA+      +          +GGGGRYD LV++  G ++PA GF +G+ R
Sbjct: 265 GLDYYTDLVFEAVTVVGERSYA--------LGGGGRYDELVAQSGGPSMPAFGFGVGLER 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +I  L    +S +         +  +  D  + +    +   LR  GI  E+   S K  
Sbjct: 317 VIQTLLEQGNSLSTSTRR----LRLIPMDEQADAFCFSWANRLRNLGIATEVDW-SHKKP 371

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-----KGKELSRE 459
              LK A  +      + G  E +     +KD++      G +   E
Sbjct: 372 KLSLKDAADQQVSFVCLLGEQELATKQFIVKDMSLHQSFSGAQQDVE 418


>gi|309810164|ref|ZP_07704009.1| histidine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308169436|gb|EFO71484.1| histidine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 428

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 99/470 (21%), Positives = 180/470 (38%), Gaps = 57/470 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D         +++ +  +N +    +  I TP+ E  +   +   +  D 
Sbjct: 1   MRVQKPKGTVDILPDTSYQWDKVENIAKNFFRKANYQEIRTPMFENYEIFSRSSGESSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P   + I  +FR E+   
Sbjct: 61  VEKEMYDFMDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYNVFYIASMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS    AD E  ++  D L  +GIK+ + HI        R      
Sbjct: 121 GRQREFHQIGVESFGSDNALADVETIVLAHDLLSTLGIKKYELHINSLGNEAVRTAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        DKL++        D   +     +++L  +   D                 
Sbjct: 181 LVDYFTPIKDKLSD--------DSQRRLKTNPLRILDSKDEEDIKF---------VSNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +L  + +K+   + + +          ++L                       VRG
Sbjct: 224 RIRDYLDDESKKNFEFIIKTLSELKIDYVLDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + + +      ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDTSLWQSKT-----TILGGGRYNHLVEEFDGPKTPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK+       +     +     +   ++++K     + LR  G++ +  +   K   
Sbjct: 316 MLVLKAQN---PELLTDSNIDFYITNIGEETITKTVEIARELRKQGLKVQYDV-EQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            Q K AD+      I  G  E     L IK L+ G+  +  +    +  +
Sbjct: 372 AQFKKADKAKAKYVITLGVQEIEENTLNIKRLSDGESYAFNMDEIANVND 421


>gi|320101387|ref|YP_004176979.1| histidyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753739|gb|ADV65497.1| histidyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 434

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 101/469 (21%), Positives = 190/469 (40%), Gaps = 45/469 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M ++  L    PRG  D    E  +   + D  R     +GF PI TP +EY        
Sbjct: 1   MSEEDILNP--PRGMRDIVGVEAELHEYLADVFRETARRHGFKPIITPTVEYFKLFEMKS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E + +  ++  QD  G+ ++LR ++TA + R   +    +  P R Y +   FR E+ 
Sbjct: 59  GEEIKRS--MYVFQDKAGRTLALRPEVTASVVRAYLKEMRALPKPVRLYYVAQCFRYEEP 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              R+R+F Q  ++ +G     ADA +    +  LEAVG+K   ++  + N      +++
Sbjct: 117 QKARYREFWQGGLEVIGDPDINADASVAFAASSFLEAVGVK---HYYVVGNVSTYRVLMD 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+G+ G+ +                     + L L +           G  +T   +++ 
Sbjct: 174 KMGVPGETQ--------------------DLILHLIDKDRVGDALKVLGGVVTGGHVELF 213

Query: 241 VSFLSIDLEKSMHELYEL-VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
              L+  L+++   L E  + G         EL    E +               +VRGL
Sbjct: 214 NKLLNSGLDEAPGILREFRLLGEGEQTTLEAELARTREFIDLLNQMGFHAVYEPRLVRGL 273

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            YY+G ++E          K    +  S+GGGGRYDGL   + G+   +TG ++G+ R+ 
Sbjct: 274 AYYSGLIFE---------YKTSEGLTVSIGGGGRYDGLTRVYGGEYEYSTGLALGLDRIA 324

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L   ++           LI     +   L       + + + G+        ++    
Sbjct: 325 LLLSPEKAVPRRS------LIVVSILEGVPLKAGYELVKRITSGGLAVI--PYRARTVSK 376

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            L +A+++     +I G  E   G++ +KD+  G + + E  + ++  +
Sbjct: 377 ALGFANKQGADAVVILGRRELESGVVTVKDMHTGMQSTIEAGDTDALIK 425


>gi|309803244|ref|ZP_07697341.1| histidine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|312875673|ref|ZP_07735674.1| histidine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329920142|ref|ZP_08276973.1| histidine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|308164752|gb|EFO67002.1| histidine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|311088927|gb|EFQ47370.1| histidine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|328936596|gb|EGG33040.1| histidine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 428

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 99/470 (21%), Positives = 180/470 (38%), Gaps = 57/470 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D         +++ +  +N +    +  I TP+ E  +   +   +  D 
Sbjct: 1   MRVQKPKGTVDILPDTSYQWDKVENIAKNFFRKANYQEIRTPMFENYEIFSRSSGESSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P   + I  +FR E+   
Sbjct: 61  VEKEMYDFMDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYNVFYIASMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS    AD E  ++  D L  +GIK+ + HI        R      
Sbjct: 121 GRQREFHQIGVESFGSDNALADVETIVLAHDLLSTLGIKKYELHINSLGNEAVRTAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        DKL++        D   +     +++L  +   D                 
Sbjct: 181 LVDYFTPIKDKLSD--------DSQRRLKTNPLRILDSKDEEDIEF---------VSNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +L  + +K+   + + +          ++L                       VRG
Sbjct: 224 RIRDYLDDESKKNFEFIIKTLSELKIDYVLDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + + +      ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDTSLWQSKT-----TILGGGRYNHLVEEFDGPKTPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK+       +     +     +   ++++K     + LR  G++ +  +   K   
Sbjct: 316 MLVLKAQN---PELLTDSNIDFYITNIGEETITKTVEIARELRKQGLKVQYDV-EQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            Q K AD+      I  G  E     L IK L+ G+  +  +    +  +
Sbjct: 372 AQFKKADKAKAKYVITLGVQEIEENTLNIKRLSDGESYAFNMDEIANVND 421


>gi|261416997|ref|YP_003250680.1| histidyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373453|gb|ACX76198.1| histidyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326327|gb|ADL25528.1| histidine--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 427

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 105/447 (23%), Positives = 194/447 (43%), Gaps = 39/447 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             +LP+G  D   +  RI+N I D+ R + E++ ++  E P+ E+ +       +E    
Sbjct: 5   IPQLPKGTRDFYPEAERIQNYIFDTWRKVAESFAYEEYEGPMFEHLELYTGKSGEEIV-- 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             +++ +D   + I+LR ++T  LAR V +    +  P + + +  +FR EK   GR R+
Sbjct: 63  SQLYNFKDKGDREIALRPEMTPTLARLVIQKARELKKPFKWFSMPRLFRYEKAQKGRLRE 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q ++D +G+ +  A+A++   +A  L   G+K +D+ IG+++RK+L   LE+IG    
Sbjct: 123 FFQLNMDIIGTESIYAEADLLASIATMLRKFGLKDSDFAIGVSSRKLLATYLEEIGAPNP 182

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
             +                    V     +   +        A L+  QI  +  F+S  
Sbjct: 183 ALVY------------------PVLDRRLKIGPEAFAKALTEAGLSEAQIKQLDDFMS-- 222

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             KS+ E+   VK +        E+  +   +  +G++   + +  +IVRGL YYTG V+
Sbjct: 223 -CKSIEEVRAAVK-SENATAALKEIEDLFATLAAAGFSEC-VNLDLSIVRGLAYYTGIVF 279

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E            K     ++ GGGRYD L  +  G  +P  GF +G   L   L+    
Sbjct: 280 EVF---------DKGKSMRAIAGGGRYDSLTEKLGGDRIPGVGFGMGDVVLADLLRERGL 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             +  + +       +   ++ + K     Q+ R  G        ++   G QL+ A+ +
Sbjct: 331 LPSPKQHVDFY----IASFTNDMKKIFETAQVFRANGNSVS-HPLATMKMGKQLEQANYQ 385

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + +     + + G  + KDL  G 
Sbjct: 386 GASIVVYVDGDKAAAGQFEYKDLRDGT 412


>gi|148284858|ref|YP_001248948.1| histidyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166228589|sp|A5CEP8|SYH_ORITB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|146740297|emb|CAM80678.1| histidyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 423

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 93/451 (20%), Positives = 167/451 (37%), Gaps = 49/451 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           ++ +  +G  D   +E    + I+   RN+ + YGF PI TP++EY++   + L  D D 
Sbjct: 3   IKLQPVKGSKDLLPEEFGKHDYIISVSRNLSKLYGFQPISTPIIEYTEIFNRTLGKDSDV 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            +K ++   D   + +SLR + TA + R V  N       P + +  GP FR +    GR
Sbjct: 63  LSKEMYVFLDKGNRSVSLRPEFTASIMRAVIYNNLQNKKLPLKYFSSGPAFRYDNPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q +++ +G  +  +DAE+ ++  D L+ + +   D      N         K   
Sbjct: 123 QRQFHQINLECIGDGSPFSDAEIVLLAYDILKKLNLV--DKVNLEINSLGCMESRAKYQQ 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +  ++    L   D   +     +++L  +   D            S     +  + 
Sbjct: 181 ALVEYFSKYRTELS-QDSQSRLIENPLRILDSKNLHDKK---------ISASAPSIHDYY 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +I+      ++ E ++                       +   +  I++ +VRGL+YY  
Sbjct: 231 TIEARGYFDKVLEYLE-----------------------FCGIKYTINANLVRGLDYYCH 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +          +     +V GGGRYDGL  +  G+          I         
Sbjct: 268 TVFEYVST--------QIGAQSTVLGGGRYDGLFEQMGGKLASGKKMLPAIGFAAGI--E 317

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +   N   +    I  +  D +      +  Q LR   I   + L    +   +L  A
Sbjct: 318 RLALLTNYTPVDVRPIVIIPVDEEYHQHGIILLQKLRNNNITTVIDLQD--SISKRLNRA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
           +       I  G  E      +IKDL    E
Sbjct: 376 NHIKASKVIFIGAIEMREQSYRIKDLDTSNE 406


>gi|312173831|emb|CBX82085.1| putative histidyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 439

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 129/472 (27%), Positives = 212/472 (44%), Gaps = 44/472 (9%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  KK+ ++     GF +   +     + +L  +R ++ ++GF PI+TP++E  + L   
Sbjct: 1   MNQKKSIVKPSPISGFLEFMPEIQLHYDGLLSELRKLFSSHGFVPIDTPVVERLEILAAK 60

Query: 60  LPDEDRPNKGVFSLQ-------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
             D D   K ++++        D+    ++LRYDLT PLARYVA++F+ I FP + + IG
Sbjct: 61  GGDVD---KEIYTITRARANDDDNSDASVALRYDLTVPLARYVAQHFNNIAFPFKRFHIG 117

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
             FR E+   GR+RQF Q D+D +  +  +   +  + +        I  ++Y   I+NR
Sbjct: 118 SCFRGERPQDGRYRQFTQADIDIINPNNVSLSFDADIPLIVNSALQIIGIDNYVFRISNR 177

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           KIL G LE + +             R +DK+DK G  GV   L +    ++         
Sbjct: 178 KILSGYLEGLNIENLQAA------TRILDKIDKIGRHGVISALQDELQLDTQ-------- 223

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
            +EQ+  + S    DL   + ++ EL       EKG  EL  + E ++ S  NS R  + 
Sbjct: 224 KAEQVVKIASISCADLS-FVDQVLELGVTNGTLEKGLEELKYVMERLQTSSQNSGRFVVD 282

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            +I RG +YYTG VYE                 GS+  GGRY+ L   +  +++P  G S
Sbjct: 283 LSITRGFDYYTGTVYEVKWNDYPH--------LGSIAAGGRYEDLAGSYIRKSLPGVGMS 334

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           +G+SR+   L    +     K   P  +     DS          + LR   I  E++  
Sbjct: 335 VGLSRIYGKLVQSGAIAIKKK--TPTNVLIAWEDSIDEKSLHTLGEKLRAKNINTEVYFK 392

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           S K    QL YA+++     +     E       +KDL   ++   +I+  +
Sbjct: 393 SDK-IQKQLSYANKKAIRYVVFPSLNE-------VKDLESEEQYVFDIETFK 436


>gi|33519979|ref|NP_878811.1| histidyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|39932114|sp|Q7VRR8|SYH_BLOFL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|33504325|emb|CAD83217.1| histidyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 433

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 91/468 (19%), Positives = 179/468 (38%), Gaps = 50/468 (10%)

Query: 1   MGK--KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M K   + +  +  RG  DC  K++     I D ++ I   YG++ I  P++E +D   +
Sbjct: 1   MIKYRNSSIHIQSVRGMHDCLPKDVIQWQYIEDVLKTILNGYGYNEIRFPIIECTDLFKR 60

Query: 59  FLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
            + +  D   K +++  D  G  ++LR + T+   R   EN        R + +GP+FR 
Sbjct: 61  SIGEVTDVVEKEMYTFIDQHGNDLTLRPEGTSGCVRAGIENSLFYHQEPRLWYMGPMFRR 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQF Q   +  G      D E+ ++     + +GI        +       G
Sbjct: 121 ERPQKGRYRQFHQFSAEAFGCVGPDIDVELILITNRCWKELGIS-----NYLTLELNSIG 175

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           +L    ++    ++        +D   K  L    + + + +     +    A +     
Sbjct: 176 LLSSRMIYRKKLISFLEKNKHNLDDSSKRRLYSNPMRILDTKNVKIKELLAHAPV----- 230

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  +L    +     L  L+                          +    ++  +VR
Sbjct: 231 --LSDYLDDCSKNHFLNLCRLLD-----------------------IANVTYIVNPYLVR 265

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E +          K  V  ++  GGRYD L+ +  G ++PA GF+IG+ R
Sbjct: 266 GLDYYNRTVFEWVT--------DKLGVKKTICAGGRYDDLIKQLGGGSIPAVGFAIGLER 317

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSK 415
           +++ +K L  S+        + +  +   +         ++ +R     +R  +  G   
Sbjct: 318 VVLLMK-LIKSSIINTRNVYIDVYLIRLGTYYQEYSIKLSEHIREKLPFLRLMVDCGGG- 375

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           NF  Q+  A++ N    I+          + +K+L   K+   +    
Sbjct: 376 NFKQQIDRAEKNNSRFVIVVDDKNFFEQTIILKELQSKKQEILKYDEI 423


>gi|297566462|ref|YP_003685434.1| histidyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850911|gb|ADH63926.1| histidyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 430

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 101/470 (21%), Positives = 181/470 (38%), Gaps = 64/470 (13%)

Query: 9   AELPRGFADCPTKEIR------IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP- 61
            +   G  D  ++         +   I+++ + +  + G  PI TP+ EY++   K +  
Sbjct: 2   LKSVPGTNDIFSQSKEYAFREPVFRYIVETAQKVLASSGAQPIHTPIFEYAEVFQKGVGL 61

Query: 62  -DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEK 119
             +    K ++  +D   + ++LR + TA + R   E+       P R +  GP+FR E+
Sbjct: 62  TSDIVVKKEMYVFEDRGERLLALRPEPTASIVRAYNEHGMKVWPQPVRLFTWGPIFRAER 121

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND----YHIGINNRKIL 175
           H  GR++QF Q D + +GS+    DAE   +M      +G++  +          +R   
Sbjct: 122 HQKGRYKQFHQVDYEAIGSADPLVDAESIALMVKIYRELGLQGLEVKLGSVGDPEDRLRY 181

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           +  L ++      +L++        D   +     +++L  +   D        A L   
Sbjct: 182 NAYLRELFRPHVKRLSQ--------DSQARLESNPMRILDSKDPGDQ-------ALLGEL 226

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           Q+  M+ FL  +       +   ++                              +  +I
Sbjct: 227 QVKPMLEFLGSESSAFHQAVQRYLE-----------------------RLGIPFHVDPSI 263

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY    +E           ++     ++GGGGRYDGL     G  VP  GF IGI
Sbjct: 264 VRGLDYYVRTAWEV--------HHRQIGAKSALGGGGRYDGLSEMLGGPRVPGVGFGIGI 315

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R+ +AL+    S           +     D  +  +     + LR    R E+   S K
Sbjct: 316 ERVAIALEEEGISIPPDPSPD---LYLAPLDEAAKGEALSLAERLRPK-FRVEIGY-SVK 370

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             G  L+ A +R        G  ER +G++ +K LA G++     +  E 
Sbjct: 371 KVGKALEEALKRGARYVGFLGEAERQKGVVALKHLASGEQREVRWEALEE 420


>gi|269302447|gb|ACZ32547.1| histidyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 430

 Score =  203 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 181/468 (38%), Gaps = 58/468 (12%)

Query: 7   LRAELPRGFADCPT--KEIR-------IRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +   LP+G  D      + +       + + +  +I  +   YGF  I TP+ E S+   
Sbjct: 1   MTVTLPKGVFDIFPYLADAKQLWRHTSLWHSVEKAIHTVCMLYGFCEIRTPIFEKSEVFL 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
               + D   K V+S  D  G+ ++LR + TA + R   E+  +     + Y I P+FR 
Sbjct: 61  HVGEESDVVKKEVYSFLDRKGRSMTLRPEGTAAVVRSFLEHGASHRSDNKFYYILPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q  V+ +G      DAE+  ++ D    VG++     +          
Sbjct: 121 ERQQAGRYRQHHQFGVEAIGVRHPLRDAEVLALLWDFYSRVGLQHMQIQLNFLGGSETRF 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             +K+      +    L  L       +F    +++L  +   D              Q 
Sbjct: 181 RYDKVLRAYLKESMGELSALS----QQRFSTNVLRILDSKEPEDQE---------IIRQA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ ++S                         +L   +E++           I+  +VR
Sbjct: 228 PPILDYVSD-----------------------EDLKYFNEILDALRVLEIPYAINPRLVR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY+  V+EA   F  ++          +GGGGRYDGL+S F G ++PA GF +G+ R
Sbjct: 265 GLDYYSDLVFEATTTFQEVSYA--------LGGGGRYDGLISAFGGASLPACGFGVGLER 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +I  L + +             +  +  + D+      ++Q LR  GI  E+   S K  
Sbjct: 317 VIQTLLAQKRIEPQFP----HKLRLIPMEPDADQFCLEWSQHLRRLGIPTEVDW-SHKKV 371

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              LK A         + G  E     L IK+++  KE     +  E 
Sbjct: 372 KGALKAASTEQVSFVCLIGERELISQQLVIKNMSLRKEFFGTKEEVEQ 419


>gi|126459143|ref|YP_001055421.1| histidyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166228602|sp|A3MTI8|SYH_PYRCJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|126248864|gb|ABO07955.1| histidyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 421

 Score =  203 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 116/454 (25%), Positives = 204/454 (44%), Gaps = 46/454 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
              RG  D    +     ++   +  + E++G+  +ETP++E+ + L +    E      
Sbjct: 10  RPVRGMRDWLPHQYYALQQLEALLSRVAESFGYRRVETPVVEHFEVLARKAGQEIVN--E 67

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D  G+ + LR+D+T P+AR V      +  P R Y    VFR ++   GR+R+F 
Sbjct: 68  IYYFRDKAGRELGLRFDMTVPIAR-VVSYNLDLPRPIRWYYFTKVFRYDEPQHGRYREFY 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+ +GS++  ADAE+  ++A++L A G    +Y I +N+R+++D +LE +GL     
Sbjct: 127 QFGVELIGSASPRADAEVVHLLAESLAAAGAS--NYVIKLNDRRVVDKLLEGMGLAA--- 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
              + +V +A+DK  K   + V  ++  G    S         T   +   V F++  ++
Sbjct: 182 --YKDVVYKALDKRYKAPREEVVGIMTRGGVPPSKAEELYEKATEMPLQEAVDFVTR-ID 238

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K +   Y      +    G   L+                     IVRGL+YYTG V+EA
Sbjct: 239 KELGGFYAAFVKYLEAAVGLERLIFDLS-----------------IVRGLDYYTGVVFEA 281

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
             G   +          +VGGGGRYD L+  + G   PA GF+IG+ R    ++++    
Sbjct: 282 FAGEYKL----------AVGGGGRYDDLLQLYSGVKTPALGFAIGVER---LMEAVGLQA 328

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   + I     D  +        + LR  G  A + LG  K   +  +Y  +   
Sbjct: 329 VEKPLDYYIYIF----DESAYQTAIYIARELRRKGYSAVVELG-DKGLKDAFEYVLKIGT 383

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +I G  E  +G+++++DL K +E+ + I   
Sbjct: 384 RFLVILGKKELEKGVVKVRDLQKREEVEKPIDEF 417


>gi|15618573|ref|NP_224859.1| histidyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|16752377|ref|NP_444636.1| histidyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242020|ref|NP_876961.1| histidyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|7674356|sp|Q9Z7P1|SYH_CHLPN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|4376962|gb|AAD18802.1| Histidyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189020|gb|AAF37970.1| histidyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33236530|gb|AAP98618.1| histidyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 430

 Score =  203 bits (515), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 105/468 (22%), Positives = 180/468 (38%), Gaps = 58/468 (12%)

Query: 7   LRAELPRGFADCPT--KEIR-------IRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +   LP+G  D      + +       + + +  +I  +   YGF  I TP+ E S+   
Sbjct: 1   MTVTLPKGVFDIFPYLADAKQLWRHTSLWHSVEKAIHTVCMLYGFCEIRTPIFEKSEVFL 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
               + D   K V+S  D  G+ ++LR + TA + R   E+  +     + Y I P+FR 
Sbjct: 61  HVGEESDVVKKEVYSFLDRKGRSMTLRPEGTAAVVRSFLEHGASHRSDNKFYYILPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q  V+ +G      DAE+  ++ D    VG++     +          
Sbjct: 121 ERQQAGRYRQHHQFGVEAIGVRHPLRDAEVLALLWDFYSRVGLQHMQIQLNFLGGSETRF 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             +K+      +    L  L       +F    +++L  +   D              Q 
Sbjct: 181 RYDKVLRAYLKESMGELSALS----QQRFSTNVLRILDSKEPEDQE---------IIRQA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ ++S                         +L   +E++           I+  +VR
Sbjct: 228 PPILDYVSD-----------------------EDLKYFNEILDALRVLEIPYAINPRLVR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY+  V+EA   F  ++          +GGGGRYDGL+S F G ++PA GF +G+ R
Sbjct: 265 GLDYYSDLVFEATTTFQEVSYA--------LGGGGRYDGLISAFGGASLPACGFGVGLER 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
            I  L + +             +  +  + D+      ++Q LR  GI  E+   S K  
Sbjct: 317 AIQTLLAQKRIEPQFP----HKLRLIPMEPDADQFCLEWSQHLRRLGIPTEVDW-SHKKV 371

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              LK A         + G  E     L IK+++  KE     +  E 
Sbjct: 372 KGALKAASTEQVSFVCLIGERELISQQLVIKNMSLRKEFFGTKEEVEQ 419


>gi|73667326|ref|YP_303342.1| histidyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|83305869|sp|Q3YRB1|SYH_EHRCJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|72394467|gb|AAZ68744.1| histidyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 413

 Score =  203 bits (515), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 96/469 (20%), Positives = 165/469 (35%), Gaps = 75/469 (15%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DE 63
            + + +  RG  D    E      I    + I   YGF  ++TP++E+++   K L  D 
Sbjct: 2   QRSKLKEVRGTKDLLGAEFYKFQYIQHLSQAIANRYGFIAVDTPIIEFTEVFTKTLGDDS 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
           D   K +++ QD  G+ I+LR + T+ + R +           + +  GPVFR E+    
Sbjct: 62  DIVTKEMYNFQDKSGENITLRPEFTSAIVRLLINKNLVTP--VKLFSSGPVFRYERPQKC 119

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRKI 174
           R RQF Q + +  GS +  AD EM  +  + L  +              D     + R  
Sbjct: 120 RQRQFHQVNFEFFGSDSPLADVEMIALGYNILSELKLLNNITLEINFLGDKETMNSYRLS 179

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   L K                 + D   +     +++L  +   D             
Sbjct: 180 LVEYLNKYKKDL------------SGDSQRRLITNPLRVLDSKSPEDCEILL-------- 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  F +        E+ + +                              ++++ 
Sbjct: 220 -NAPNIGDFYTKYSSDFFTEVLDGLNDLC-----------------------IPYQLNNR 255

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           IVRGL+YY   V+E                  +V  GGRYDGLV    G + PA GF++G
Sbjct: 256 IVRGLDYYCNTVFEFTTSE--------LGSQNAVIAGGRYDGLVRSMGGNDTPAVGFAMG 307

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R+   +          +      +  +    D++S        LR  GI       ++
Sbjct: 308 IERVSALID--------YEHKESRNVVLVPIGKDAMSYALKLAYELRCKGISVGWNYKNT 359

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               N L+  +  +    +I G  E     +Q+KD+  G++   E  N 
Sbjct: 360 G-LKNMLRKINDNSI--VLIFGDEELKSNTVQVKDMKTGEQQEVEKGNL 405


>gi|148653698|ref|YP_001280791.1| histidyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|172048559|sp|A5WGQ0|SYH_PSYWF RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|148572782|gb|ABQ94841.1| histidyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 436

 Score =  203 bits (515), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 94/473 (19%), Positives = 181/473 (38%), Gaps = 72/473 (15%)

Query: 9   AELPRGFADCPTKEIRI------RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
            +  +GF D    E           ++   ++   + +G++ I  P++E +    + + D
Sbjct: 2   IKSIKGFNDILQVETATSRPSSEWRQLEAMLKQALDQFGYEEIRLPIVEETQLFARAIGD 61

Query: 63  -EDRPNKGVFSLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             D   K +FS  D       I+LR + TA   R V E+        + + +GP+FR E+
Sbjct: 62  ATDIVEKEMFSFTDKSDPPTPITLRPEGTAGAVRAVIEHNLLRGDSPKLWYMGPMFRYEQ 121

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  GS     +AE+  M     + +GI   D+ + +    + +   
Sbjct: 122 PQKGRYRQFHQLGVEAFGSEHVDVEAELIAMTYLMWQRLGI---DHELSLEINSLGELDE 178

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            K       +  +        D   +     +++L  +     +            +   
Sbjct: 179 RKAYRSALVEFLQTKKEQLDEDSQRRLTTNPLRILDSKDPNTQALLM---------EAPR 229

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  FL  D +    +L   +                               ++  +VRGL
Sbjct: 230 LADFLGEDSQAHFEQLKTYLTAL-----------------------GIEYVVNPNLVRGL 266

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-----------FKGQNVPA 348
           +YY   V+E +          K     +V  GGRYDGL+ +              ++ PA
Sbjct: 267 DYYNKTVFEWVT--------DKLGSQATVCAGGRYDGLIGQLKSIGKSEDKAKAVKSEPA 318

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIR 406
            GF++G+ RL++ ++++       +    V +       D   +  +Y Q LR A   +R
Sbjct: 319 VGFAMGLERLLLLVQAVN--PIQAQPACDVFVVVHP---DLYQQGLLYAQSLRQARSDLR 373

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            +M   S+ +   Q+K AD+    L +I    E   G + +K +  G+++S++
Sbjct: 374 VKMA--SASSLKAQMKKADKSGAQLTVILAQDEVESGTISVKTMHTGEQVSQD 424


>gi|198283714|ref|YP_002220035.1| histidyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667079|ref|YP_002426343.1| histidyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198248235|gb|ACH83828.1| histidyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519292|gb|ACK79878.1| histidyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 439

 Score =  203 bits (515), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 91/441 (20%), Positives = 165/441 (37%), Gaps = 52/441 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  RG  D   +E      +   +R +   Y +  +  PL+E ++   + + D  D   
Sbjct: 6   LQAVRGMNDIFPEESAGWQALEGDLRMLLALYDYGEVRLPLVESTELFARAIGDATDIVQ 65

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +++  D +G  ++LR + TA   R   +         R Y +GP+FR+E+   GR+RQ
Sbjct: 66  KEMYTFADRNGDSLTLRPEGTAGCVRAAIQARSIRGQTPRYYYMGPMFRHERPQKGRYRQ 125

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+  G  A   DAE+ ++ A  L   G+  +     + +          +  +  
Sbjct: 126 FHQLGVEVFGLPAAGTDAEVIVLSARILRTAGVTASLQINSLGSPAARIRYRTLLLDYLR 185

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +  E        D  ++     +++L  +                +     +V  L  D
Sbjct: 186 PRRGEL-----CADCRERMERNPLRVLDCK---------VPACQEIARMAPHLVDHLDED 231

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                  L  L+                               ++ ++VRGL+YY   V+
Sbjct: 232 SAAHFASLQSLLTAL-----------------------DIPYLVNHSLVRGLDYYNRTVF 268

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +               G+V  GGRYDGLV++  G + PA GF++     +  L +L++
Sbjct: 269 EWVT--------DALGAQGTVLAGGRYDGLVAQLGGADTPAIGFAV----GLERLLALQA 316

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                 E    L+     D  ++++     + LR AGI      G    F N +K A+R 
Sbjct: 317 LQGRGIEAPHPLLFIGALDDIAVARAWRIAERLRDAGISVVT--GGPATFKNVMKQAERS 374

Query: 428 NCPLAIIQGTGERSRGMLQIK 448
                 + G  + +   L +K
Sbjct: 375 RARFQALIGAEQIAGEPLILK 395


>gi|292489656|ref|YP_003532546.1| putative histidyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898130|ref|YP_003537499.1| histidyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291197978|emb|CBJ45080.1| putative histidyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291555093|emb|CBA23213.1| putative histidyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 439

 Score =  203 bits (515), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 129/472 (27%), Positives = 211/472 (44%), Gaps = 44/472 (9%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  KK+ ++     GF +   +     + +L  +R ++ ++GF PI+TP++E  + L   
Sbjct: 1   MNQKKSIVKPSPISGFLEFMPEIQLHYDGLLSELRKLFSSHGFVPIDTPVVERLEILAAK 60

Query: 60  LPDEDRPNKGVFSLQ-------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
             D D   K ++++        D+    ++LRYDLT PLARYVA++F+ I FP + + IG
Sbjct: 61  GGDVD---KEIYTITRARANDDDNSDASVALRYDLTVPLARYVAQHFNNIAFPFKRFHIG 117

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
             FR E+   GR+RQF Q D+D +     +   +  + +        I  ++Y   I+NR
Sbjct: 118 SCFRGERPQDGRYRQFTQADIDIINPDNVSLSFDADIPLIVNSALQIIGIDNYVFRISNR 177

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           KIL G LE + +             R +DK+DK G  GV   L +    ++         
Sbjct: 178 KILSGYLEGLNIENLQAA------TRILDKIDKIGRHGVISALQDELQLDTQ-------- 223

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
            +EQ+  + S    DL   + ++ EL       EKG  EL  + E ++ S  NS R  + 
Sbjct: 224 KAEQVVKIASISCADLS-FVDQVLELGVTNGTLEKGLEELKYVMERLQTSSQNSGRFVVD 282

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            +I RG +YYTG VYE                 GS+  GGRY+ L   +  +++P  G S
Sbjct: 283 LSITRGFDYYTGTVYEVKWNDYPH--------LGSIAAGGRYEDLAGSYIRKSLPGVGMS 334

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           +G+SR+   L    +     K   P  +     DS          + LR   I  E++  
Sbjct: 335 VGLSRIYGKLVQSGAIAIKKK--TPTDVLIAWEDSIDEKSLHTLGEKLRAKNINTEVYFK 392

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           S K    QL YA+++     +     E       +KDL   ++   +I+  +
Sbjct: 393 SDK-IQKQLSYANKKAIRYVVFPSLNE-------VKDLESEEQYVFDIETFK 436


>gi|297623998|ref|YP_003705432.1| histidyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165178|gb|ADI14889.1| histidyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 427

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 93/468 (19%), Positives = 176/468 (37%), Gaps = 54/468 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP--DED 64
           ++    +G  D   ++ R+R  +L +   + E+ G   +  P+ E+++   K +    + 
Sbjct: 1   MKLRAVKGTFDILPEDQRLRRHVLSTAERVLEHAGVLELTPPIFEHTEVFTKSVGASSDL 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPG 123
                +++  D   + ++LR + TA + R   EN       P + +  GP+FR E    G
Sbjct: 61  VVQHEMYTFTDRGERSLTLRPEFTAGVLRAYIENGLIVWPTPVKLWSYGPIFRAENPQRG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH-IGINNRKILDGILEKI 182
           RFRQF Q + + +G      DAE   ++   L A G++        + + +        +
Sbjct: 121 RFRQFHQVNCEFLGLDTPLLDAEAIALLYTVLSACGLEGLTVRLGSVGDPEDAAAYNAYL 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                 + +E     R     ++  L  +++L  +   D +   T    L          
Sbjct: 181 RRELGARQSELSETSR-----ERLRLNPMRVLDSKDAGDQAVIATLKRPL---------D 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL+ D       +   +                              ++  +IVRGL+YY
Sbjct: 227 FLNPDARAHFEGVQAFLT-----------------------TWGIPFEVDDSIVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +E                  ++ GGGRYDGLV+   G   P  G++ G+ R++ AL
Sbjct: 264 RRTAFEI--------HAAGIGAQSALCGGGRYDGLVAALGGPETPGVGWAFGLERVLDAL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +                +  +  D +++++       LR   +       + +N G   K
Sbjct: 316 REAGVRAPEAARPA---LFLVPMDDEAVAEVAALAFRLR-QNLTVLHAY-AKRNLGKGFK 370

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            A+R     A ++G  ER RG+  +KDLA G++L         +   R
Sbjct: 371 EAERAGARFAGLRGARERERGVYALKDLATGEQLELPEGELAGFLHER 418


>gi|307721019|ref|YP_003892159.1| histidyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306979112|gb|ADN09147.1| histidyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 404

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 101/465 (21%), Positives = 172/465 (36%), Gaps = 72/465 (15%)

Query: 9   AELPRGFADCPTK-EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
            +  RG  D   + E +     L+   ++ + YGF  IETPLLE +    + + +  D  
Sbjct: 2   IKSLRGMNDILDENEYKRFTYFLEVAADVAKKYGFHYIETPLLEETALFKRSVGESSDIV 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRF 125
            K ++   D     + LR + TA + R   +            +  GP+FR E+   GR 
Sbjct: 62  GKEMYQFIDKGENDVCLRPEGTAGVVRAFIQKKLDKAGGIHRFFYYGPMFRYERPQKGRL 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG-------IKRNDYHIGINNRKILDGI 178
           R+F Q  V++ G ++   DA M MM+AD L+ +G           D +     R  L   
Sbjct: 122 REFHQFGVESFGVASVYEDAAMIMMVADILKKLGIGYRLQLNSLGDNNCMPQYRDSLVSF 181

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           +E +                  D   +     +++L  +                 E   
Sbjct: 182 IESVEEQ------------ICEDCKRRKSTNPIRVLDCKNEK---------CQFLYENAP 220

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +++ L    E    +L +++       +    L                       VRG
Sbjct: 221 KLINSLCEGCESDFDKLKKILDDNDISYEIDTNL-----------------------VRG 257

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY+   +E +                ++ GGGRYD LV    G+  PA GF++GI RL
Sbjct: 258 LDYYSKTAFEFV--------SDNIGSQSAIAGGGRYDRLVEFLDGRPTPAVGFAMGIERL 309

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +  +         + E           D +++      T   R A  +A      +KN  
Sbjct: 310 LELI--------AMPEESREGYYLGAMDEEAVDTIVSLTHKKRAAD-KAVCDYK-AKNLK 359

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           N LK AD+ N     + GT E + G + +K+L    EL+ + ++ 
Sbjct: 360 NHLKSADKVNAKYCCVIGTNEMNEGTIWVKNLESKTELTIKREDF 404


>gi|324327245|gb|ADY22505.1| histidyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 425

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 129/463 (27%), Positives = 208/463 (44%), Gaps = 40/463 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG   +ETP L   + +       D  
Sbjct: 1   MEMRNIKGTKDYLPEEQVLRNKIKRACEDTFERYGCKSLETPTLNMYELMSYKYGGGDEI 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   I  P + Y IG VFR+     GRFR
Sbjct: 61  LKEIYTLQDQGKRDLALRYDLTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GIL+ I +  
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILQSINIPT 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        V+ ++DK++K G+ GV+  + E              ++ E  D + + +  
Sbjct: 177 ER----TSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 220

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L+ S+ +  E          G NEL  + + +   G N N I  +  + RGL  YTG V
Sbjct: 221 CLQLSIADFKEAF-NNPLVADGVNELQQLQQYLIALGINENTI-FNPFLARGLTMYTGTV 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALKS 364
           YE  L    +           +G GGRYD ++   R    N P  G S G+  +  AL  
Sbjct: 279 YEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E     I     V I  +  +   L   Q          ++ E+ L + +     L YA
Sbjct: 331 KE----TISSTADVFIIPLGTELQCLQLAQQLRST---TSLKIELEL-AGRKLKRALNYA 382

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           ++ N P  +I G  E S     ++++ +G E+   + +  S+ 
Sbjct: 383 NKENIPYVLIIGEEELSTETAMLRNMKEGSEVKVPLSSLSSYL 425


>gi|309805189|ref|ZP_07699241.1| histidine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|312871836|ref|ZP_07731924.1| histidine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872922|ref|ZP_07732982.1| histidine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874202|ref|ZP_07734236.1| histidine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|315653587|ref|ZP_07906507.1| histidine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|308165423|gb|EFO67654.1| histidine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|311090272|gb|EFQ48682.1| histidine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091444|gb|EFQ49828.1| histidine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092778|gb|EFQ51134.1| histidine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315488949|gb|EFU78591.1| histidine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 428

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 100/470 (21%), Positives = 180/470 (38%), Gaps = 57/470 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D         +++ +  +N +    +  I TP+ E  +   +   +  D 
Sbjct: 1   MRVQKPKGTVDILPDTSYQWDKVENIAKNFFRKANYQEIRTPMFENYEIFSRSSGESSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P   + I  +FR E+   
Sbjct: 61  VEKEMYDFMDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYNVFYIASMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS    AD E  ++  D L  +GIK+ + HI        R      
Sbjct: 121 GRQREFHQIGVESFGSDNALADVETIVLAHDLLSTLGIKKYELHINSLGNEAVRTAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        DKL++        D   +     +++L  +   D                 
Sbjct: 181 LVDYFTPIKDKLSD--------DSQRRLKTNPLRILDSKDEEDIEF---------VSNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +L  + +K+   + + +          ++L                       VRG
Sbjct: 224 RIRDYLDDESKKNFEFIIKTLSELKIDYVLDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + + +      ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDTSLWQSKT-----TILGGGRYNHLVEEFDGPKTPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK+       +     +     +   ++++K     + LR  G++ +  +   K   
Sbjct: 316 MLVLKAQN---PELLTDSNIDFYITNIGEETITKTVEIARELRKQGLKVQYDV-EQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            Q K AD+      I  G  E     L IK L+ GK  +  +    +  +
Sbjct: 372 AQFKKADKAKAKYVITLGVQEIEENTLNIKRLSDGKSYAFNMDEIANVND 421


>gi|229005605|ref|ZP_04163310.1| Histidyl-tRNA synthetase 1 [Bacillus mycoides Rock1-4]
 gi|228755637|gb|EEM04977.1| Histidyl-tRNA synthetase 1 [Bacillus mycoides Rock1-4]
          Length = 441

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 126/463 (27%), Positives = 215/463 (46%), Gaps = 42/463 (9%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           ++     +G  D    E  +RN+I  +    +E YG  P+ETP L   + +         
Sbjct: 3   QMDVRNVKGTKDYLPAEQLLRNKIKRACEETFERYGCKPLETPTLNMYELMAYKYGGGAE 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +++L+D   + I+LRYDLT P A+ VA N   I  P + Y IG VFR+     GRF
Sbjct: 63  ILKEMYTLRDQGNREIALRYDLTIPFAKVVAMN-PDIRLPFKRYEIGKVFRDGPIKQGRF 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+FIQCDVD VG  +  A+AE+  M  D  + + +   D  I  NNRK+L GIL+ + + 
Sbjct: 122 REFIQCDVDIVGVESVIAEAELMAMAFDLFKTLNL---DVTIQYNNRKLLTGILKSVEIQ 178

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +    +   V+ ++DKL+K G+ GV+  L            +   + ++ I+++   + 
Sbjct: 179 DE----QTNDVILSLDKLEKIGIDGVRKDL------------QSRGIVNDTIEVVCHTVE 222

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             +   ++E  ++   ++   +G NEL  + + +   G   N +  +  + RGL  YTG 
Sbjct: 223 SCMTLELNEFKQIFSNSLVT-EGINELQQLQQYLLALGIQDNTV-FNPFLARGLTMYTGT 280

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALK 363
           VYE  L    +           +G GGRYD ++   R    + P  G S G+  +  AL 
Sbjct: 281 VYEIFLTDGSITSS--------IGSGGRYDNIIGAFRNDNTSYPTIGISFGLDVIYTALT 332

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGSSKNFGNQLK 422
             E       E     I  +  +++   +    TQ+LR+    + E+ L + +     L 
Sbjct: 333 QKE------TESTCADIFIIPINTEV--ECLRITQLLRSKSTFKVELEL-AGRKLKRSLN 383

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           YA++ N P  +I G  E S   + ++++ +G E+   +   E 
Sbjct: 384 YANKENIPYVLIIGDTEISTETIVLRNMKEGTEMKLPLSCIED 426


>gi|189184154|ref|YP_001937939.1| histidyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|229558701|sp|B3CTK8|SYH_ORITI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189180925|dbj|BAG40705.1| histidyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 423

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 94/451 (20%), Positives = 165/451 (36%), Gaps = 49/451 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           ++ +  +G  D   +E    + I+   RN+ + YGF PI TP++EY++   + L  D D 
Sbjct: 3   IKLQPVKGSKDLLPEEFGKHDYIVSVSRNLSQLYGFQPISTPIIEYTEIFNRTLGKDSDV 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            +K ++   D   + +SLR + TA + R V  N       P + +  GP FR +    GR
Sbjct: 63  LSKEMYVFLDKGNRSVSLRPEFTASIMRAVIYNNLQNKKLPLKYFSSGPAFRYDNPQAGR 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q +++ +G  +  +DAE+ ++  D L+ + +   D      N         K   
Sbjct: 123 QRQFHQINLECIGDDSPFSDAEIVLLAHDILKTLNLV--DKVNLEINSLGCMESRAKYQQ 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +  ++    L   D   +     +++L  +   D            S     +  + 
Sbjct: 181 ALVEYFSKYRTELS-QDSQSRLIENPLRILDSKNLHDKK---------ISASAPSIHDYY 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +I       ++ E ++                       +   +  I++ +VRGL+YY  
Sbjct: 231 TIKSRCYFDKVLEYLE-----------------------FCGIKYTINANLVRGLDYYCH 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E            +     +V GGGRYDGL  +  G+          I         
Sbjct: 268 TVFEYTST--------QIGAQSTVLGGGRYDGLFEQMGGKLASGKKTLPAIGFAAGI--E 317

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +   N   +    I  +  D +      M  Q LR   I   + L    +   +L  A
Sbjct: 318 RLALLTNYTPVDVRPIVIIPVDEEHHQHGIMLLQKLRNNNITTVIDLQD--SISKRLNRA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
           +       I  G  E      +IKDL    E
Sbjct: 376 NYIKASKVIFIGAIEVREQSYRIKDLDTSNE 406


>gi|257068570|ref|YP_003154825.1| histidyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559388|gb|ACU85235.1| histidyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 460

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 139/502 (27%), Positives = 210/502 (41%), Gaps = 72/502 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K          GF +    E  +   ++D  R + E +GF  IET  +E  + L +  
Sbjct: 1   MAK-----IAALSGFPEWLPAERLVEQHVIDVFREVAELHGFSGIETRAVEPLEQLLRKG 55

Query: 61  PDEDRPNKGVFSL---------------QDDDGQWISLRYDLTAPLARYVAENFDTIVFP 105
                 +K V+ L               +D   + + L +DLT PLARYV E+ + +VFP
Sbjct: 56  E----IDKEVYVLRRLHAEEEDGAEAGREDRS-RTLGLHFDLTVPLARYVLEHQNDLVFP 110

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
            R ++I  V+R E+   GRFR+F Q D+D +G        E  +          +    +
Sbjct: 111 LRRFQIQKVWRGERPQDGRFREFYQADLDVIGQDTLPGHIEAEVATVMAEILDRLPLPAF 170

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I  N R++ +G    IGL       ++  VLR++DKL K G   V+ LL          
Sbjct: 171 TIHANTRRLSEGFFRSIGLE------DQAAVLRSLDKLPKIGPDAVRELL---------- 214

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                  + EQ    + F SI    +     + EL       E+G  EL  + E V    
Sbjct: 215 -LAEVGASVEQAQACLDFASIRTRDASFADRVRELGGSGEMVEQGIAELTSVLERVEA-- 271

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
                I    +I RGL+YYTG V+E  +              GSV  GGRYD L S  + 
Sbjct: 272 AVPGVIMADLSIARGLDYYTGTVFETFVTG--------HEALGSVCSGGRYDALASDNRH 323

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
              P  G SIG+SRL+  L S   +T +      VL++  D     LS+     + LR+ 
Sbjct: 324 T-YPGVGLSIGLSRLVSRLLSAGLATASRSVPTCVLVSVADEQHRHLSEA--AARSLRSR 380

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           GI  E+   ++K FG Q++YADRR  P            G  Q+KD+  G ++     + 
Sbjct: 381 GISCEVAPTAAK-FGKQIRYADRRGIPFIWFPSAD---GGADQVKDIRSGHQVE---ADA 433

Query: 464 ESWREARVAQITIPISELVSTV 485
            +W+         P  +L + +
Sbjct: 434 AAWQP--------PAEDLTARI 447


>gi|197294530|ref|YP_001799071.1| histidyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|226737076|sp|B1VA46|SYH_PHYAS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|171853857|emb|CAM11819.1| Histidyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 415

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 93/459 (20%), Positives = 180/459 (39%), Gaps = 52/459 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D    +     ++ +S  + ++ + F  I TP++EY++   +     +  +K  ++
Sbjct: 6   KGTHDLLPTQTTSWQKVENSFHSFFKKHQFQEIRTPIMEYAEVFHRAAQHSEMVSKETYA 65

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   + I+LR + TA + R   EN         + Y  GP FR E+   GR+RQF Q 
Sbjct: 66  FPDKKNRLITLRPEGTAGIVRSYIENKLDQTNKLQKFYYYGPYFRYERPQFGRYRQFHQL 125

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            V+ +G +    D E+  ++   L+++G+  +D  I IN+    +  L+ + +       
Sbjct: 126 GVEVLGKTTPFLDIEVITLIYQFLKSLGL--DDITIQINSLGSKEDHLDYVDIFKQYLKI 183

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
               +      L    L    L + + +T +  DF        +Q   +   LS   +K 
Sbjct: 184 YSNYLC----GLCHERLNKNPLRIWDCKTCHLQDFL-------KQAPKIFDSLSPKSKKR 232

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
              +   ++      K  ++L                       VRGL+YYT  V+E   
Sbjct: 233 FQTVLNGLEAMKVNFKTCHDL-----------------------VRGLDYYTHTVFEITF 269

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
              V+             GGG YD LV+   G  +   GF++G+ RL++ L+   +   +
Sbjct: 270 NKMVLG------------GGGCYDHLVAALGGNQLSGIGFALGMERLMLTLQENNNFFVS 317

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
            +    + +  +  D            +LR  G   E     +  F   LK A +     
Sbjct: 318 PQPSLKLFLFIL--DPVFFHHGLTLVHILRNEGFCVEFNYSFT-TFTKGLKEALKCLPNY 374

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +I G  E ++  + IK++    + + + K+   + + +
Sbjct: 375 LLILGHQEFAKKQITIKNIKTHTQTTIDQKDLIFYFQQQ 413


>gi|126465884|ref|YP_001040993.1| histidyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014707|gb|ABN70085.1| histidyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 430

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 106/465 (22%), Positives = 200/465 (43%), Gaps = 46/465 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     + PRG  D    + ++   ++D  + I    GF PI TP++E+        
Sbjct: 1   MKKEL---IQTPRGVRDLIGIDAQLHEYLVDKFKKISMLNGFKPINTPIIEFFKLFEAKS 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E    K ++  +D  G+ ++LR ++TA + R   ++      P R Y +G  FR E+ 
Sbjct: 58  GEE--IKKSMYVFKDKAGRLLALRPEVTASIVRAYLKHMQGWTKPIRLYYVGQCFRYEEP 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F Q  ++ +G     AD  +    +  LE +GIK   ++  + N  I   ++ 
Sbjct: 116 QRGRYREFWQAGLEIIGEKNINADLSVAFTASKYLEEIGIK---HYYIVGNVAIYRAVMS 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS-EQIDI 239
           K GL  +++                     V  L+ +   D + ++ K  N    E I+ 
Sbjct: 173 KYGLSIEEQ-------------------DHVLHLIDKKMIDEALNYLKQKNEELYEIINE 213

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++      LE  + +  E+++     ++   EL  ++  +              ++VRGL
Sbjct: 214 LLKTPLSKLENFLEQYREILED--KYDQLKEELNKLNIFINNLRELGFNAIYDPSLVRGL 271

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            YYTG ++E          K    +  S+GGGGRYDGL   + G    +TG ++G+ RL+
Sbjct: 272 AYYTGLIFE---------YKATKGLDISIGGGGRYDGLTEIYGGTYEYSTGLALGLDRLM 322

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + +K +     +     P+    +   +  ++      + L + GI + ++  +      
Sbjct: 323 LIMKEI-----SYNPPKPISALIIILGNTPITIGYKIQEKLSSIGISSWIYTTN--KLRK 375

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            L  A++ N   AII G  E  +  + IKDL   ++++   K  E
Sbjct: 376 ALSIANKENIDFAIIIGEKEYRQEKISIKDLQAKEQITINNKMLE 420


>gi|281204606|gb|EFA78801.1| histidine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 440

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 96/476 (20%), Positives = 194/476 (40%), Gaps = 48/476 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +G  D   KE R+   + +  R +   YGF  + TP++E+++   + + D  D  +K ++
Sbjct: 6   KGTIDIFPKEKRLYQFVGNVGRRVAAIYGFKEMSTPIIEHTELFQRSVGDDSDIVSKEMY 65

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           S +D  G    LR + TA + R V         P R +  GP+FR E+   GR RQF Q 
Sbjct: 66  SFKDLGGSMTCLRPENTAGVVRAVVNEQSAAHMPQRYFYSGPMFRYERPQRGRQRQFEQL 125

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            +++ G S  ++D E+       L  + I  + Y + IN+   L+   + +    +    
Sbjct: 126 GIESFGESDPSSDVEVIDCANMFLNQLSITNDKYTLKINSLGDLESRSKYLNQ-LELYYK 184

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +R   L    +        +++L  +   D +          S+    +  +L+ +    
Sbjct: 185 DRRESLSKDSQDRLDRGSILRILDSKDVKDKA---------ISKDAPKLFDYLNSESLDR 235

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +++   +                            + ++   +VRGL+YY   ++E ++
Sbjct: 236 FNKVLNGLDKFEL-----------------------KYQLDHNLVRGLDYYNHTIFEMVV 272

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-----PATGFSIGISRLIVALKSLE 366
           G         P+      GGGRYDGL ++F  ++      P+ G++ G+ R+++ +    
Sbjct: 273 GDETTTSSAPPLAI---LGGGRYDGLANKFGYKSQKSAALPSIGWACGVERILMFMDQQL 329

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  E  P+++ T + +   +   +   + LR  G    +    + +   Q++ A++
Sbjct: 330 LKP----ETKPIVVCTFESNESIVQLARDIARTLRHQGYAVIVS-DLNLSTSKQIRNANQ 384

Query: 427 RNCP-LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           R  P + I+ G  E     +QIK +A   + +  I+           Q   PI+ +
Sbjct: 385 RYEPEVVIVVGGEEALTNSVQIKHMATESKHTVRIEKITDHLTQLNIQTIDPINNI 440


>gi|291333294|gb|ADD93002.1| histidyl tRNA synthetase [uncultured archaeon MedDCM-OCT-S04-C163]
          Length = 444

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 88/454 (19%), Positives = 168/454 (37%), Gaps = 22/454 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           + PRG  D   K +  R      +       GF+ ++TP+ E  +               
Sbjct: 3   QRPRGTRDFTPKVMNRRLAFEQLLEKCARRSGFNRVQTPVFESLELFTAKSGQG--VISQ 60

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +++ +D   + ++LR +LTAP+ R +AE       P R    G  +R E+   GR+R+F 
Sbjct: 61  LYAFEDKGARPLTLRPELTAPVMRMIAEEMRNDTKPLRLSYFGQCYRYEEFKKGRYREFF 120

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+ VG+S   A+AE+  +    L+A G+K  D+ I I +  IL   L  +GL  +  
Sbjct: 121 QYGVELVGASGPLAEAEVIALAISMLDACGLK--DWQIRIGHVGILKDALSGLGLSSETS 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                  + +               L +G         +   + ++    + +   ++  
Sbjct: 179 EGAGEPPIASAM-----------RFLDKGDDKGLEALLESNGIAAKNAAPLRALADLEGG 227

Query: 250 KSMHELYELVKGTIAG--EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                    +  ++ G      +EL V  + V         + +  T+ RGL+YYTG V+
Sbjct: 228 AETLGPARDILSSLEGVSLDALDELQVTLDSVAALAPAPPSLAVDLTVARGLDYYTGMVF 287

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E I+       +        +        L            GF   +  L     +   
Sbjct: 288 EVIVPSMGGEGQVLGGGSYKLLHLFGLTDLDPCCGF----GLGFDRVLLALEAQAAAENR 343

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
           S     E+  + +      +  +S+       LR  G R E+ L   +  G  + +A+  
Sbjct: 344 SEVVPGELDDMSLIACIPFNIDVSQVLPLVGELRAKGQRVELEL-RGRKIGKAMNWANGI 402

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                ++ G  +  +G   +K+L  G++ +  + 
Sbjct: 403 GATTTMVVGPRDLEQGQCMLKNLQTGEQQAVALS 436


>gi|254518949|ref|ZP_05131005.1| histidyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912698|gb|EEH97899.1| histidyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 432

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 127/459 (27%), Positives = 208/459 (45%), Gaps = 33/459 (7%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDED 64
           K++  +  GF +    E R  N I++ I  +YE  G  PI+TP++E ++  L K   +  
Sbjct: 5   KIKPSILPGFMELLPIEQRKFNDIVEKITKVYEENGCLPIDTPIIEKAEILLAKNAGET- 63

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              K V++ Q      ++LR+DLT P ARY ++ F+ + FP + Y+IG V+R E++  GR
Sbjct: 64  --EKQVYAFQ-KGSNNLALRFDLTVPFARYTSQYFNDLNFPLKRYQIGKVYRGERNQRGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F QCDVD +G    +   +  ++   +     I   DY   I+NRKIL  +L  + +
Sbjct: 121 YREFYQCDVDIIGKDKLSIKNDALVISLASKAFKSIGLKDYKFQISNRKILSALLSSLNI 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                    + V+  IDK DK G Q  K  L +     S          +   D ++  L
Sbjct: 181 ESS------IDVMILIDKYDKIGEQTFKEELDKLVNKESAKIINKVININGSKDKVLEEL 234

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +           L         G NEL  ++  +   G   +   I+  I+RGL+YYTG
Sbjct: 235 EL-----------LNIQDEKFTLGLNELKEVTTTLEVLGVYDSEYIINLKIIRGLDYYTG 283

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +L             +GS+  GGRYD L   +    +P  G SIG++RL   LK 
Sbjct: 284 TVFETLLINNE--------EYGSICSGGRYDNLAENYTNNILPGVGISIGLTRLFFVLKE 335

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           +     + K    V    +    D+L       + L  +G   EM+    K    +L YA
Sbjct: 336 IG-FVESYKLPSKVEYLIIPIG-DTLKYCGEVYKKLTESGKAVEMYFEDDK-LKKKLNYA 392

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           ++   P  I+ G  E +   + IK++  GK+ + + ++ 
Sbjct: 393 NKLEIPYVILLGEEEEANKSINIKNMITGKQETLKFEDI 431


>gi|182416712|ref|ZP_02948112.1| histidyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237667747|ref|ZP_04527731.1| histidine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182379437|gb|EDT76931.1| histidyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237656095|gb|EEP53651.1| histidine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 431

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 121/458 (26%), Positives = 214/458 (46%), Gaps = 33/458 (7%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK  ++  +  GF +   KE  I + ++  I+ +YE+ G   I+TP++E ++ L      
Sbjct: 2   KKNIIKPSILPGFMELLPKEQEIFDDMVSKIKTVYEDNGCLAIDTPIIEKAEVLLAKTGG 61

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           E    K V++ Q      ++LR+DLT P ARYVA+ ++ +VFP + Y+IG V+R E++  
Sbjct: 62  E--TEKQVYNFQ-KGKNQLALRFDLTVPFARYVAQYYNDLVFPFKRYQIGKVYRGERNQK 118

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+R+F QCD+D +G    +   +  ++   +     I   DY   I+NRKIL GIL ++
Sbjct: 119 GRYREFYQCDIDVIGKEKLSIGNDAWVISLASKAFKSIGLIDYRFQISNRKILKGILSEL 178

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +  D+++      +  IDK DK G       L         ++          I+ ++ 
Sbjct: 179 KIDNDNEV------MILIDKYDKVGKDVFSKELENIIGTEKSNY----------INKVLD 222

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L+   ++ + EL +L        +G  EL  +   +   G +    +I+  I+RGL+YY
Sbjct: 223 -LNGTNKEIIEELSKLNLENKYFIEGIEELKKVCYTLSMLGVSEEEFEINLKIIRGLDYY 281

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG V+E IL             +GS+  GGRYD L   +    +P  G SIG++RL   L
Sbjct: 282 TGTVFETILVGNE--------GYGSICSGGRYDNLAENYTNNILPGVGISIGLTRLFFVL 333

Query: 363 KSLE-SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           K +       +K     LI  +    D++         L+  G +  ++   + +   ++
Sbjct: 334 KEIGFIDKYEMKNKLDYLIIPIG---DTIEYCIEVMNYLQDNGKKVTVYFEDN-SLKKKM 389

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            Y ++      I+ G  E     ++IK++  G   + +
Sbjct: 390 NYTNKLGINNVILIGEDEVEMKEVKIKNMITGDSRNVD 427


>gi|84496356|ref|ZP_00995210.1| histidyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383124|gb|EAP99005.1| histidyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 450

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 137/487 (28%), Positives = 204/487 (41%), Gaps = 60/487 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++     GF +    E  +    LD IR  +E +GF  +ET  +E  + L     D D  
Sbjct: 1   MKVTKLSGFPEFLPAERIVEQHFLDVIRETFELHGFTSLETRAVEPVERLVGQGGDAD-- 58

Query: 67  NKGVF-------SLQDD--DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
            K ++         +D       + L +DLT P AR+V EN   + FP R Y+I  V+R 
Sbjct: 59  -KEIYGITRLAQKSEDRKDSDAELGLHFDLTVPFARFVLENAGKLSFPYRRYQIQKVWRG 117

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+R+F Q D+D V     +   E  M +        +      I +NNRKI +G
Sbjct: 118 ERPQEGRYREFTQADIDVVDMGQLSPHFEAEMPLVVAEIFSRLPIGKMTIQVNNRKIPEG 177

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             + IG+       +    LR +DKLDK G   VK LL E            A  T EQ 
Sbjct: 178 FYQGIGIE------DVAGTLRIVDKLDKIGPDKVKALLVE------------AGRTDEQA 219

Query: 238 DIMVSFLSIDLEK--SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           D  ++  +I  E    + ++  L       ++G   L  + +           +     I
Sbjct: 220 DQCLALAAIRTEDLSFVDQVRALGVENPTLDEGLEALSAVIQ--SGLDNAPGAMVADLKI 277

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
            RGL+YYTG VYE  L             +GS   GGRYD L S  K    P  G SIG+
Sbjct: 278 ARGLDYYTGTVYETQLEGYE--------SWGSFCSGGRYDALASDGKTT-YPGVGISIGL 328

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           SRL+  +        +      VL+  +  D +S  +     Q LR  GI  E+   ++K
Sbjct: 329 SRLLGLVIGKGLVRASRATPAAVLVAVV--DEESRRESSAVAQALRARGISCEVAPSAAK 386

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGML-QIKDLAKGKELSREIKNNESWREARVAQI 474
            FG Q++YADRR  P          + G + Q+KD+  G ++     +  +W        
Sbjct: 387 -FGKQIRYADRRGIPFVWF--PEGSAEGSVGQVKDIRSGDQVD---ADPATW-------- 432

Query: 475 TIPISEL 481
           T P+ +L
Sbjct: 433 TPPVDDL 439


>gi|259500577|ref|ZP_05743479.1| histidine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191268|ref|ZP_07267522.1| histidyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806600|ref|ZP_07700597.1| histidine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|309807560|ref|ZP_07701512.1| histidine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325912619|ref|ZP_08175002.1| histidine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|259167961|gb|EEW52456.1| histidine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308167020|gb|EFO69202.1| histidine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308169166|gb|EFO71232.1| histidine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325478040|gb|EGC81169.1| histidine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 428

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 100/470 (21%), Positives = 179/470 (38%), Gaps = 57/470 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D         +++ +  +N +    +  I TP+ E  +   +   +  D 
Sbjct: 1   MRVQKPKGTVDILPDTSYQWDKVENIAKNFFRKANYQEIRTPMFENYEIFSRSSGESSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P   + I  +FR E+   
Sbjct: 61  VEKEMYDFMDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYNVFYIASMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS    AD E  ++  D L  +GIK+ + HI        R      
Sbjct: 121 GRQREFHQIGVESFGSDNALADVETIVLAHDLLSTLGIKKYELHINSLGNEAVRTAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        DKL++        D   +     +++L  +   D                 
Sbjct: 181 LVDYFTPIKDKLSD--------DSQRRLKTNPLRILDSKDEEDIEF---------VSNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +L  + +K+   +   +          ++L                       VRG
Sbjct: 224 RIRDYLDDESKKNFEFIIRTLSELKIDYVLDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + + +      ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDTSLWQSKT-----TILGGGRYNHLVEEFDGPKTPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK+       +     +     +   ++++K     + LR  G++ +  +   K   
Sbjct: 316 MLVLKAQN---PELLTDSNIDFYITNIGEETITKTVEIARELRKQGLKVQYDV-EQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            Q K AD+      I  G  E     L IK L+ GK  +  +    +  +
Sbjct: 372 AQFKKADKAKAKYVITLGVQEIEENTLNIKRLSDGKSYAFNMDEIANVND 421


>gi|325181060|emb|CCA15469.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 443

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 92/459 (20%), Positives = 176/459 (38%), Gaps = 47/459 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
                RG  D   + + I+  +  + ++I   YGF  ++TP+LEY++   + L  D D  
Sbjct: 21  TFRRVRGMKDLYGEVMDIQEFVSQTFQSIVTRYGFQKMQTPVLEYTNLYMRSLGADSDIV 80

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           NK +++ QD  G  +SLR + TA + R + +       P + +  G ++R E+   GRFR
Sbjct: 81  NKEMYTFQDKSGDSVSLRPEGTASVIRALKDGNLVSKLPRKVFYDGKMYRYERPQRGRFR 140

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ VG  + + D E+ +M    L A+ + R    + IN     +  +       
Sbjct: 141 EFQQFGVEYVGCRSPSVDVEVIVMADRCLRALDV-RERTELHINTLGDAESRIR-YKEAL 198

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +  + R+ +L +  +L       +++L  +   D                     +LS 
Sbjct: 199 REYFSTRIRLLSSESQLRFERGNLLRILDSKNDQDQDLIQC---------APSFGQYLSC 249

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              +    +   ++                               ++ +VRGL+YY   V
Sbjct: 250 VASERFEGVQSGLQELGID-----------------------FVHNTRLVRGLDYYCDTV 286

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +   P  + K       ++  GG Y+ L+    G  +   G++ GI RL +      
Sbjct: 287 FEFVEDDPSSHVKM------ALLAGGCYENLMESVGGSKLICIGWAAGIDRLCLL----- 335

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +           +I       +   K     + LR  G+   +  G  +    Q+K ADR
Sbjct: 336 NKLRPSSPTSLFIIPLPSTTRNLFPKAFEIAEKLRETGLIVHLSHGKGQ-LKKQIKTADR 394

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             C   I  G  E     +++K++  G++ +      + 
Sbjct: 395 LECDYTIFLGDQEFEAAQVRVKNMQSGEQQTIAWSQLDQ 433


>gi|269103370|ref|ZP_06156067.1| histidyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163268|gb|EEZ41764.1| histidyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 419

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 97/431 (22%), Positives = 178/431 (41%), Gaps = 48/431 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +  RG  D    E  I   +   +R   +NYG+  I  P+LE  +   + + +  D 
Sbjct: 1   MDIKSIRGMKDILPTETPIWQWVEKVLRKATKNYGYKEIRLPILEPIELFQRAVGEATDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +K ++   D   + I+LR + T+   R V EN        R +  GP+FR E+   GR 
Sbjct: 61  VSKEMYDFIDKSNEHITLRPEGTSGCVRSVIENNLCYNNTQRLWYQGPMFRYERPQKGRL 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  V+  G S    D+E+  +  +   A+G+ ++  ++ IN+   ++  LE     
Sbjct: 121 RQFNQFGVETFGMSNADIDSELIYLSNEIFSALGLTKH-INLEINSLGTIEERLE--HRK 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 ++   L   D L +     +++L  +     +           E    ++ +L+
Sbjct: 178 ALINYFKKHQDLLDEDSLIRLEKNPLRILDSKNPQMQTM---------LENAPKLLDYLT 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                               E+  +    +   + +      +  I+  +VRGL+YYT  
Sbjct: 229 --------------------EESLDHFKTVCSNLDQV---DIKYTINPRLVRGLDYYTRT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            +     +V GGGRYDGLV+ F GQ++PA+GF+IGI RLI+ L+++
Sbjct: 266 VFEWTT--------DQLGSQSTVCGGGRYDGLVALFSGQSLPASGFAIGIERLILLLEAV 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG-SSKNFGNQLKYA 424
             +  +        I     D    +K  +  + LR    + E++   S      Q + A
Sbjct: 318 NITPPHDSSKK---IIFTCEDKLDTNKALILAKNLRDTFPQLEVYSDFSGSKLKKQHQRA 374

Query: 425 DRRNCPLAIIQ 435
            + +  + +  
Sbjct: 375 LKESADIVVTL 385


>gi|307354508|ref|YP_003895559.1| histidyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157741|gb|ADN37121.1| histidyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 405

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 94/460 (20%), Positives = 176/460 (38%), Gaps = 56/460 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D   +E+  R  I   +R +   +G+  + TP  E  +       +      
Sbjct: 2   LQKPRGTRDFLPEEMEQRREIEMRMRRVAGLFGYHEVLTPTFENQELYTIKSGEGIIG-- 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++ +D  G+ ++LR + TA + R        +  P R   +   +R E+   GR+RQF
Sbjct: 60  EMYTFEDKGGRKLALRPEGTAAILRMYVNEAKVLPKPIRWCYLLDCYRYERPQKGRYRQF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G+     DAE+ ++                         DG+L   G+    
Sbjct: 120 WQFGSELIGADTAAGDAEIILLA------------------------DGLLRAAGVRFSL 155

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           ++     +   +  L +   + V  LL +   D             E  D + + +    
Sbjct: 156 QVGHLAPMKHILLDLGEEDKKRVMALLDKRSFDELEACLNDTG-KPELYDKLTALIE--- 211

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
             ++ E  E+         G   +  +  ++           ++  IVRGL+YYTG V+E
Sbjct: 212 CTTIDEAKEVCGDFP----GMERMEEMLGILDSQKL---EYSLNLGIVRGLDYYTGMVFE 264

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                      +       + GGG Y  L   F G++ P+ GF IG  R++V+   +E  
Sbjct: 265 GF--------AENLGAENQIIGGGSY-RLAHLFGGEDTPSCGFGIGFDRVMVSRGEVELK 315

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +         +  + +  +   +      MLR  GIR E+ L   +  G Q+K+A R  
Sbjct: 316 RDP--------LVAILYTQEGQKRAFEVAGMLRREGIRTEINL-LDRGVGAQMKHASRT- 365

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              A++ G  E   G + +K+LA G ++  ++ +      
Sbjct: 366 AQYAVLIGKNEVESGTVTLKNLASGDQVECKLDDLPGEVR 405


>gi|284998337|ref|YP_003420105.1| histidyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284446233|gb|ADB87735.1| histidyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 426

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 108/462 (23%), Positives = 199/462 (43%), Gaps = 40/462 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + E  RG  D    +      +  + R++   YG+  I TP++E          +E R  
Sbjct: 3   KFETVRGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRET 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++  +D   + +SLR ++T  +AR   +N  +   P R +  G V+R ++   GR+R+
Sbjct: 63  --MYVFKDKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G S+  AD E+  ++ +  + + +  ND  I INN  I   I++K  +  +
Sbjct: 121 FRQAGIEMIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNI--E 177

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D L E ++ L   +K+++      K L  +   D         +   E I+ +     + 
Sbjct: 178 DNLQEHILHLIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEV- 236

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                           +     +E + +  L R     + + KI    VRGL YYTG ++
Sbjct: 237 ----------------SRLDIKSEFLYLFRLSRILSNLNIKFKIDLGFVRGLAYYTGLIF 280

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +           P V  S+ GGGRYD L+  + G   PA GF+IG+ R ++ +K L+ 
Sbjct: 281 EVL----------HPSVQFSIAGGGRYDKLIELYGGLPSPAIGFAIGVERTLLVIKDLKV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                    PV +  +    D++    M +++LR    +  +           L Y   +
Sbjct: 331 EE-------PVNVIVIGISEDTIPSMFMVSRILRKEEYKVVINTKDQP-LSKLLPYYASQ 382

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              +AII G  E  + M+ +++L   K++S  ++N E   + 
Sbjct: 383 GFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIEDAIKQ 424


>gi|227828115|ref|YP_002829895.1| histidyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227830822|ref|YP_002832602.1| histidyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|238620315|ref|YP_002915141.1| histidyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|259511960|sp|C4KIQ9|SYH_SULIK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|259511961|sp|C3MRE4|SYH_SULIL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|259511962|sp|C3MY40|SYH_SULIM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|227457270|gb|ACP35957.1| histidyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227459911|gb|ACP38597.1| histidyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|238381385|gb|ACR42473.1| histidyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 426

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 108/462 (23%), Positives = 199/462 (43%), Gaps = 40/462 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + E  RG  D    +      +  + R++   YG+  I TP++E          +E R  
Sbjct: 3   KFETVRGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRET 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++  +D   + +SLR ++T  +AR   +N  +   P R +  G V+R ++   GR+R+
Sbjct: 63  --MYVFKDKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G S+  AD E+  ++ +  + + +  ND  I INN  I   I++K  +  +
Sbjct: 121 FRQAGIEMIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNI--E 177

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D L E ++ L   +K+++      K L  +   D         +   E I+ +     + 
Sbjct: 178 DNLQEHILHLIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEV- 236

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                           +     +E + +  L R     + + KI    VRGL YYTG ++
Sbjct: 237 ----------------SRLDIKSEFLYLFRLSRILSNLNIKFKIDLGFVRGLAYYTGLIF 280

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +           P V  S+ GGGRYD L+  + G   PA GF+IG+ R ++ +K L+ 
Sbjct: 281 EVL----------HPSVQFSIAGGGRYDKLIELYGGLPSPAIGFAIGVERTLLVIKDLKV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                    PV +  +    D++    M +++LR    +  +           L Y   +
Sbjct: 331 EE-------PVNVIVIGMSEDTIPSMFMVSRILRKEEYKVVINTKDQP-LSKLLPYYASQ 382

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              +AII G  E  + M+ +++L   K++S  ++N E   + 
Sbjct: 383 GFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIEDAIKQ 424


>gi|323477909|gb|ADX83147.1| histidyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 426

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 109/462 (23%), Positives = 200/462 (43%), Gaps = 40/462 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + E  RG  D    +      +  + R++   YG+  I TP++E          +E R  
Sbjct: 3   KFETVRGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRET 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++  +D   + +SLR ++T  +AR   +N  +   P R +  G V+R ++   GR+R+
Sbjct: 63  --MYVFKDKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G S+  AD E+  ++ +  + + +  ND  I INN  I   I++K  +  +
Sbjct: 121 FRQAGIEMIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNI--E 177

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D L E ++ L   +K+++      K L  +   D         +   E I+ +     + 
Sbjct: 178 DNLQEHILHLIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEV- 236

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                           +     +E + +  L R     + +IKI    VRGL YYTG ++
Sbjct: 237 ----------------SRLDIKSEFLYLFRLSRILRNLNIKIKIDLGFVRGLAYYTGLIF 280

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +           P V  S+ GGGRYD L+  + G   PA GF+IG+ R ++ +K L+ 
Sbjct: 281 EVL----------HPSVQFSIAGGGRYDKLIELYGGLPSPAIGFAIGVERTLLVIKDLKV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                    PV +  +    D++    M +++LR    +  +           L Y   +
Sbjct: 331 EE-------PVNVIVIGMSEDTIPSMFMVSRILRKEEYKVVINTKDQP-LSKLLPYYASQ 382

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              +AII G  E  + M+ +++L   K++S  ++N E   + 
Sbjct: 383 GFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIEDAIKQ 424


>gi|323475177|gb|ADX85783.1| histidyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 426

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 107/462 (23%), Positives = 199/462 (43%), Gaps = 40/462 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + E  RG  D    +      +  + R++   YG+  I TP++E          +E R  
Sbjct: 3   KFETVRGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRET 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++  +D   + +SLR ++T  +AR   +N  +   P R +  G V+R ++   GR+R+
Sbjct: 63  --MYVFKDKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G S+  AD E+  ++ +  + + +  ND  I INN  I   I++K  +  +
Sbjct: 121 FRQAGIEMIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNI--E 177

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D L E ++ L   +++++      K L  +   D         +   E I+ +     + 
Sbjct: 178 DNLQEHILHLIDKNEINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEV- 236

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                           +     +E + +  L R     + + KI    VRGL YYTG ++
Sbjct: 237 ----------------SRLDIKSEFLYLFRLSRILSNLNIKFKIDLGFVRGLAYYTGLIF 280

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +           P V  S+ GGGRYD L+  + G   PA GF+IG+ R ++ +K L+ 
Sbjct: 281 EVL----------HPSVQFSIAGGGRYDKLIELYGGLPSPAIGFAIGVERTLLVIKDLKV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                    PV +  +    D++    M +++LR    +  +           L Y   +
Sbjct: 331 EE-------PVNVIVIGMSEDTIPSMFMVSRILRKEEYKVVINTKDQP-LSKLLPYYASQ 382

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              +AII G  E  + M+ +++L   K++S  ++N E   + 
Sbjct: 383 GFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIEDAIKQ 424


>gi|307686930|ref|ZP_07629376.1| histidyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 447

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 125/459 (27%), Positives = 205/459 (44%), Gaps = 32/459 (6%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     ++  +  GF +   KE  I N I+D I  +Y+N G   I+TP++E ++ L    
Sbjct: 17  MN-MDIIKPSILAGFMELLPKEQEIFNDIVDKITAVYKNNGCMAIDTPIIEKAEVLLAKN 75

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             E    K V+S Q      ++LR+DLT P ARYVA+ ++ + FP R Y++G V+R E++
Sbjct: 76  GGE--TEKQVYSFQ-KGKNNLALRFDLTVPFARYVAQYYNELTFPFRRYQLGKVYRGERN 132

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F QCDVD +G    + + +  ++         I   DY   ++NRK+L GIL 
Sbjct: 133 QKGRYREFYQCDVDVIGKDKLSINNDAWVISLADKAFKEIGLLDYQFQVSNRKVLKGILI 192

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 + ++     ++  IDK DK   +  +  +          +              
Sbjct: 193 ------EQEIENVTEIMILIDKYDKIDKKSFEDQITNIIGQEKSKYLNN----------- 235

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  +    E+ +  L +L        +G NEL  +  ++      S R +I+  I+RGL+
Sbjct: 236 ILDIQGSNEEILAGLTKLQIKNEYFLEGINELRQVKAMLEHLDVASERFRINLKIIRGLD 295

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E IL             +GS+  GGRYD L   +    +P  G SIGI+RL  
Sbjct: 296 YYTGTVFETILIGNE--------SYGSICSGGRYDNLAGSYTENLLPGVGISIGITRLFF 347

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            LK +    N   +     I       ++L      T+ L   G    ++   +     +
Sbjct: 348 VLKEIGFIGNYRIKNKLDYIII--PIGETLDYCMEVTKYLEKKGFGVTVYFEDNP-LKKK 404

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           + YA++      I+ G  ER    ++IKD+  G E   E
Sbjct: 405 MNYANKLGVEKVILIGEDERLNNEIKIKDMMSGDERKIE 443


>gi|15897222|ref|NP_341827.1| histidyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174467|ref|ZP_06388436.1| histidyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|32130140|sp|Q980L3|SYH_SULSO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|13813419|gb|AAK40617.1| Histidyl-tRNA synthetase (hisS) [Sulfolobus solfataricus P2]
 gi|261601888|gb|ACX91491.1| histidyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 426

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 102/457 (22%), Positives = 195/457 (42%), Gaps = 42/457 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + E  RG  D    +      +  + R++ + YG+  I TP++E          +E R  
Sbjct: 3   KFETVRGMKDYIGIDAEKIRYLESTFRDLAKKYGYSEIITPVVEEFKLFELKGGEELRQT 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++  +D   + ISLR ++T  +AR   +N  +   P R +  G V+R ++   GR+R+
Sbjct: 63  --MYVFKDKADREISLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G S+  AD E+  ++ +  + + + + D  I INN  I   I++K  +  +
Sbjct: 121 FRQAGIEMIGDSSILADVEVLDLLYNFYDKLNLSK-DITIKINNIGIFRKIMDKYNIEDN 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            + +                     L L +    +        N+ ++ I   ++ +   
Sbjct: 180 LQEHV--------------------LHLIDKNKVDEALVILEKNIKNKDIMDFLNMILTK 219

Query: 248 LEKSMHELYELVKGTIAGE-KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            E  + ++  L +     +    NE   +  L R     + + K+    VRGL YYTG +
Sbjct: 220 KEAKLEDIESLAELEEVSKLDIKNEFEYLLRLSRILSSLNVKFKVDLGFVRGLAYYTGLI 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +           P V  S+ GGGRYD L+  + G   PA GF+IG+ R ++ +K L+
Sbjct: 280 FEVL----------HPSVQFSIAGGGRYDKLIELYGGLPSPAIGFAIGVERTLLVIKDLK 329

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                     P+ +  +    +++      ++MLR    +  +           L Y   
Sbjct: 330 VEE-------PINVIVVGISEEAIPAMFTVSRMLRKEEYKVVINTKDQP-LSKLLPYYAS 381

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +   LAII G  E  + M+ +++L   K++S  ++N 
Sbjct: 382 QGFKLAIIIGKQELEKNMITVRNLITRKQISIPLENV 418


>gi|18312709|ref|NP_559376.1| histidyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|32130132|sp|Q8ZWZ1|SYH_PYRAE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|18160186|gb|AAL63558.1| histidyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 419

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 117/452 (25%), Positives = 208/452 (46%), Gaps = 46/452 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
              RG  D    +      + + +  + E++G+  +ETP++E+ + L K    +      
Sbjct: 10  RPVRGMRDWLPPQYYALRHMEEVLCKVAESFGYRRVETPVVEHFEVLAKKAGQD--VINE 67

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D  G+ + LR+D+T P+AR V      +  P R Y    VFR ++   GR+R+F 
Sbjct: 68  IYYFKDKAGRDLGLRFDMTVPVAR-VLSYNLELPRPVRWYYFTKVFRYDEPQHGRYREFY 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+ VGSS+  ADAE+  ++  +LEA G    ++++ IN+R+ +D +LE +G+     
Sbjct: 127 QFGVELVGSSSPRADAEVIQLLIASLEAAGAS--NFYVRINDRRAVDKLLEHLGVAPYRD 184

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           +  +     A+DK  K   + V  ++             G  ++ E  + +    +   E
Sbjct: 185 IIYK-----ALDKKLKLPREDVIKIMT------------GGGVSKEIAEEI---YNTATE 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
            ++ E  EL+      +        I + +        R+K   +IVRGL+YYTG V+EA
Sbjct: 225 ITIQEAVELL--YKLDKALGASYEKIVKYLEA-SVPMERLKFDMSIVRGLDYYTGIVFEA 281

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +G   +          +VGGGGRYD L+  + G   PA GF+IG+ R    ++++    
Sbjct: 282 FVGEYKL----------AVGGGGRYDDLLELYSGVKTPALGFAIGVER---LMEAVGIQN 328

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   + I     D D+        + LRT G    + LG  K   +  +YA +   
Sbjct: 329 VERPLDYYIYIF----DDDAYKYAAAVAKKLRTEGYSVVVELGE-KGLKDAFEYALKVGA 383

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              II G  E  +G+++++DL K  E+ + + 
Sbjct: 384 RHIIIIGRKELEKGVIKVRDLEKRIEVEKPLS 415


>gi|229579718|ref|YP_002838117.1| histidyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|259511964|sp|C3N7K1|SYH_SULIY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|228010433|gb|ACP46195.1| histidyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 426

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 108/462 (23%), Positives = 199/462 (43%), Gaps = 40/462 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + E  RG  D    +      +  + R++   YG+  I TP++E          +E R  
Sbjct: 3   KFETVRGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRET 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++  +D   + +SLR ++T  +AR   +N  +   P R +  G V+R ++   GR+R+
Sbjct: 63  --MYVFKDKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G S+  AD E+  ++ +  + + +  ND  I INN  I   I++K  +  +
Sbjct: 121 FRQAGIEMIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNI--E 177

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D L E ++ L   +K+++      K L  +   D         +   E I+ +     + 
Sbjct: 178 DNLQEHILHLIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEV- 236

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                           +     +E + +  L R     + + KI    VRGL YYTG ++
Sbjct: 237 ----------------SRLDIKSEFLYLFRLSRILSDLNIKFKIDLGFVRGLAYYTGLIF 280

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +           P V  S+ GGGRYD L+  + G   PA GF+IG+ R ++ +K L+ 
Sbjct: 281 EVL----------HPSVQFSIAGGGRYDKLIELYGGLPSPAIGFAIGVERTLLVIKDLKV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                    PV +  +    D++    M +++LR    +  +           L Y   +
Sbjct: 331 EE-------PVNVIVIGMSEDTIPSMFMVSRILRKEEYKVVINTKDQP-LSKLLPYYASQ 382

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              +AII G  E  + M+ +++L   K++S  ++N E   + 
Sbjct: 383 GFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIEDAIKQ 424


>gi|88608104|ref|YP_506656.1| histidyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|123749999|sp|Q2GCZ0|SYH_NEOSM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|88600273|gb|ABD45741.1| histidyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 413

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 99/484 (20%), Positives = 194/484 (40%), Gaps = 75/484 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++    +G  D   +++     I    +N+   Y F  +ETP++E+++   + L +  D 
Sbjct: 3   IKINNVKGTRDLFGEQLEKMRLIEQVAKNLSIRYLFTELETPIIEHTELFIRNLGETSDV 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            NK ++S QD  G  I LR + TA + R   ENF  I  P R +  GP+FR E+   GR+
Sbjct: 63  VNKEIYSFQDKSGHNICLRPEFTAAVTRAFVENFQHIQSPVRLFSFGPLFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q + + +G+       E  ++    L+ +GI+       +   +  +     +  +
Sbjct: 123 RQFHQVNFEWIGAKHYLWAVEAIVLAKSFLKEIGIRCEIRVNSLGCSRTREEYKLALINY 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                        + D L +     +++L  +  ++   +   GA         ++ + +
Sbjct: 183 FQQYKEHL-----SADSLLRLKKNPLRILDSKDPSEK--EIVVGA-------PRILDYHT 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D  K    + +++K                              +   +VRGL+YY+G 
Sbjct: 229 DDALKEFESICDILK-----------------------LLDIEFSVDHRLVRGLDYYSGL 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           ++E                  ++ GGG Y+ L     G+ V + GF+ GI RLI  +  L
Sbjct: 266 IFEFTSPD--------LGAQDALLGGGAYEQLSENLGGKKVQSIGFAAGIERLIDIMPVL 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                        +++ +     +  +       LR+ G+ A+M  G   +  +++K A+
Sbjct: 318 -------APTSDKIVSIVPIGEIAEREALKLLFYLRSEGLCADMCYGL--SVKSRMKRAE 368

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           R    + +I G  E SRG   ++ +  G                   Q+T+   +L+ST+
Sbjct: 369 RS--TVTVILGEEEFSRGESTVRIMETG------------------QQMTVAHEKLLSTL 408

Query: 486 KKIL 489
           +++L
Sbjct: 409 RELL 412


>gi|302876199|ref|YP_003844832.1| histidyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579056|gb|ADL53068.1| histidyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 431

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 125/459 (27%), Positives = 205/459 (44%), Gaps = 32/459 (6%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     ++  +  GF +   KE  I N I+D I  +Y+N G   I+TP++E ++ L    
Sbjct: 1   MN-MDIIKPSILAGFMELLPKEQEIFNDIVDKITAVYKNNGCMAIDTPIIEKAEVLLAKN 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             E    K V+S Q      ++LR+DLT P ARYVA+ ++ + FP R Y++G V+R E++
Sbjct: 60  GGE--TEKQVYSFQ-KGKNNLALRFDLTVPFARYVAQYYNELTFPFRRYQLGKVYRGERN 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F QCDVD +G    + + +  ++         I   DY   ++NRK+L GIL 
Sbjct: 117 QKGRYREFYQCDVDVIGKDKLSINNDAWVISLADKAFKEIGLLDYQFQVSNRKVLKGILI 176

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 + ++     ++  IDK DK   +  +  +          +              
Sbjct: 177 ------EQEIENVTEIMILIDKYDKIDKKSFEDQITNIIGQEKSKYLNN----------- 219

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  +    E+ +  L +L        +G NEL  +  ++      S R +I+  I+RGL+
Sbjct: 220 ILDIQGSNEEILAGLTKLQIKNEYFLEGINELRQVKAMLEHLDVASERFRINLKIIRGLD 279

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E IL             +GS+  GGRYD L   +    +P  G SIGI+RL  
Sbjct: 280 YYTGTVFETILIGNE--------SYGSICSGGRYDNLAGSYTENLLPGVGISIGITRLFF 331

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            LK +    N   +     I       ++L      T+ L   G    ++   +     +
Sbjct: 332 VLKEIGFIGNYRIKNKLDYIII--PIGETLDYCMEVTKYLEKKGFGVTVYFEDNP-LKKK 388

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           + YA++      I+ G  ER    ++IKD+  G E   E
Sbjct: 389 MNYANKLGVEKVILIGEDERLNNEIKIKDMMSGDERKIE 427


>gi|303232605|ref|ZP_07319290.1| histidine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481091|gb|EFL44166.1| histidine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 436

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 91/481 (18%), Positives = 166/481 (34%), Gaps = 66/481 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
           A+  +G  D    ++R+    +   R+I++ +GF+ IETP LE   +    + +  D   
Sbjct: 2   AQKIQGCEDLYGDQMRLWQHAVAVARSIFDTFGFEMIETPALEQVATFVHGIGESSDVVR 61

Query: 68  KGVFS-----LQD-----------DDGQWISLRYDLTAPLARYVAENF--DTIVFPCRTY 109
           K +F      L D              Q ++LR + TA + R   E+          R +
Sbjct: 62  KEMFRVYSAALLDGVMQHGSEDHLKAKQRMALRPEGTAGVVRACVEHNFIQGGANDTRLW 121

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
               +FR E+   GR RQF Q  V+ + +    ADAE  MM+      +GI  +   + I
Sbjct: 122 YAEAMFRGERPQKGRLRQFHQIGVEWLAAPDPAADAECIMMLMKFYTTMGIPLDKLQLRI 181

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           N+    +               ++       D L++  +  ++  + + + +      + 
Sbjct: 182 NSMGDTEC--RPAYRALVQAYIKKHADSMCEDCLERAEINPLR--VFDCKNETCQAIMQD 237

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A L           L     +   +    +                              
Sbjct: 238 APL-------YRDHLCDACAEHYVQTKHFLDQLHLS-----------------------Y 267

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
               T+VRGL+YYT  V+E       +               GRYD LV    G      
Sbjct: 268 IEDPTLVRGLDYYTRTVFEVECPDAGVGAIGGG---------GRYDNLVELEGGHPCCGL 318

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G+++G  R+ +AL +L              +                + MLR + IR E 
Sbjct: 319 GWALGFERVALALAALNVEP---PAPSFPFVYVAYTSQQERMYAFSVSNMLRDSHIRCES 375

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                ++   Q K AD+ N    ++ G  E +   + ++D+   ++    +    +  +A
Sbjct: 376 SYQM-RSLKAQFKQADKYNARYCVVIGEAEVAANEVTLRDMQTHEQERVALDELAAKLKA 434

Query: 470 R 470
           R
Sbjct: 435 R 435


>gi|228992057|ref|ZP_04151993.1| Histidyl-tRNA synthetase 1 [Bacillus pseudomycoides DSM 12442]
 gi|228767786|gb|EEM16413.1| Histidyl-tRNA synthetase 1 [Bacillus pseudomycoides DSM 12442]
          Length = 441

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 126/463 (27%), Positives = 215/463 (46%), Gaps = 42/463 (9%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           ++     +G  D    E  +RN+I  +    +E YG  P+ETP L   + +         
Sbjct: 3   QMDVRNVKGTKDYLPAEQLLRNKIKCACEETFERYGCKPLETPTLNMYELMAYKYGGGAE 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +++L+D   + I+LRYDLT P A+ VA N   I  P + Y IG VFR+     GRF
Sbjct: 63  ILKEMYTLRDQGNREIALRYDLTIPFAKVVAMN-PDIRLPFKRYEIGKVFRDGPIKQGRF 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+FIQCDVD VG  +  A+AE+  M  D  + + +   D  I  NNRK+L GIL+ + + 
Sbjct: 122 REFIQCDVDIVGVESVIAEAELMAMAFDLFKTLNL---DVTIQYNNRKLLTGILKSVEIQ 178

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +    +   V+ ++DKL+K G+ GV+  L            +   + ++ I+++   + 
Sbjct: 179 DE----QTNDVILSLDKLEKIGIDGVRKDL------------QSRGIVNDTIEVVCHTVE 222

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             +   ++E  ++   ++   +G NEL  + + +   G   N +  +  + RGL  YTG 
Sbjct: 223 SCMTLELNEFKQIFSNSLVT-EGINELQQLQQYLLALGIQDNTV-FNPFLARGLTMYTGT 280

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALK 363
           VYE  L    +           +G GGRYD ++   R    + P  G S G+  +  AL 
Sbjct: 281 VYEIFLTDGSITSS--------IGSGGRYDNIIGAFRNDNTSYPTVGISFGLDVIYTALT 332

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGSSKNFGNQLK 422
             E       E     I  +  +++   +    TQ+LR+    + E+ L + +     L 
Sbjct: 333 QKE------TESTCADIFIIPINTEV--ECLRITQLLRSKSTFKVELEL-AGRKLKRSLN 383

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           YA++ N P  +I G  E S   + ++++ +G E+   +   E 
Sbjct: 384 YANKENIPYVLIIGDTEISTETIVLRNMKEGTEIKLPLSCIED 426


>gi|229581614|ref|YP_002840013.1| histidyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|259511963|sp|C3NFX3|SYH_SULIN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|228012330|gb|ACP48091.1| histidyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 426

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 108/462 (23%), Positives = 199/462 (43%), Gaps = 40/462 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + E  RG  D    +      +  + R++   YG+  I TP++E          +E R  
Sbjct: 3   KFETVRGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRET 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++  +D   + +SLR ++T  +AR   +N  +   P R +  G V+R ++   GR+R+
Sbjct: 63  --MYVFKDKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G S+  AD E+  ++ +  + + +  ND  I INN  I   I++K  +  +
Sbjct: 121 FRQAGIEMIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNI--E 177

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D L E ++ L   +K+++      K L  +   D         +   E I+ +     + 
Sbjct: 178 DNLQEHILHLIDKNKINEALDILEKNLKNKDIIDFFYKILTKKDTKLEDIESLAELEEV- 236

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                           +     +E + +  L R     + + KI    VRGL YYTG ++
Sbjct: 237 ----------------SRLDIKSEFLYLFRLSRILSDLNIKFKIDLGFVRGLAYYTGLIF 280

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +           P V  S+ GGGRYD L+  + G   PA GF+IG+ R ++ +K L+ 
Sbjct: 281 EVL----------HPSVQFSIAGGGRYDKLIELYGGLPSPAIGFAIGVERTLLVIKDLKV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                    PV +  +    D++    M +++LR    +  +           L Y   +
Sbjct: 331 EE-------PVNVIVIGMSEDTIPSMFMVSRILRKEEYKVVINTKDQP-LSKLLPYYASQ 382

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              +AII G  E  + M+ +++L   K++S  ++N E   + 
Sbjct: 383 GFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIEDAIKQ 424


>gi|85057874|ref|YP_456790.1| histidyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123725331|sp|Q2NIN2|SYH_AYWBP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|84789979|gb|ABC65711.1| histidyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 427

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 95/463 (20%), Positives = 175/463 (37%), Gaps = 49/463 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
               +G  D    ++    ++ + IR ++  Y    I TP++EY     +     +  +K
Sbjct: 2   FSKIKGTHDLMLDKMVCWQKVENHIRTLFAKYHLQEIRTPIIEYRGVFDRAAQHSEMVSK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRFRQ 127
             ++  D  G++I+LR + TA + R   EN           +  GP FR E+   GR+RQ
Sbjct: 62  ETYTFTDKKGRFITLRPEGTAGVIRSYVENKLDKTSQLHKFFYYGPFFRYERPQKGRYRQ 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK-ILDGILEKIGLHG 186
           F Q  V+ +G S+   D E+  +   TL+++GI      I     K   +  L+    + 
Sbjct: 122 FHQVGVEILGQSSPFLDVEVIFLAYKTLKSLGICDITVKINSLGCKTTYNNYLQVFKNYL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   +       ++F    +++   +   +             +Q   +   L  
Sbjct: 182 QTHYQQLCPLC-----QERFEKNILRIWDCKNCNNEPF---------LKQAPRIFDHLVE 227

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D +    ++ E +K      +  ++L                       VRGL+YYT  V
Sbjct: 228 DAKVRFLQVLEGLKQMNVNFELCHDL-----------------------VRGLDYYTNSV 264

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +                 +GGGG YD LV+ F+G   P  GF++G+ RL+  L +  
Sbjct: 265 FEIVYNNE-------QGHQAVLGGGGCYDNLVTLFRGSPSPGIGFALGMERLMSILATRS 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               NI       I     +     +       LR  G  A++      +F   LK A +
Sbjct: 318 FCNKNILPSLDAFILV--SEPQFFYQGLELATTLRHQGFSADLNYKF-LSFSKSLKQALK 374

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +     +I G  E +   + IK+    ++ +   K+  S+ + 
Sbjct: 375 KQPLYLLILGPKEFANNQITIKNTYTQQQTTILQKDVVSYLQN 417


>gi|254416007|ref|ZP_05029763.1| histidyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196177182|gb|EDX72190.1| histidyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 523

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 101/530 (19%), Positives = 198/530 (37%), Gaps = 76/530 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + E  RG  D    +  I  ++ +++R  ++++G+ PI+ PL+EY++   +   +E  P 
Sbjct: 5   KIERVRGVNDVLPDDYAITKQLENTLRQCFQSFGYRPIDVPLIEYTELYLRKSGEEIAPR 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++     + + + LR + TA + R   +N   +  P R Y  G  FR E+    R+RQ
Sbjct: 65  --LYDFIYRN-RRLCLRPEFTASVVRAYVDNLQGVPQPIRLYYAGSAFRYERPQKERYRQ 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G++   ADAE+  + +  L  +G+      +         G++ K   +  
Sbjct: 122 FNQMGIELIGATGAMADAEIIAIASQGLNRLGLSGYRIVL------GHIGVISKFLDNLQ 175

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI-------DIM 240
            +   R  +L  ++ L K G   V+  L +        +T    L+ EQ          +
Sbjct: 176 LESRLRSFLLTNMEILRKDGKSAVEQRLCDIY-PAFALYTSNPQLSPEQTNPETVHSQRL 234

Query: 241 VSFLSIDLEKS--------MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
                   E          +  +   + G    ++  + L+   +   ++   S  ++  
Sbjct: 235 SQLFQGMAESDAQTTILDLLDSMNIELAGNRDAQEIVDRLLTKIKRQDQTERVSKALEFM 294

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF--------------------------- 325
           S + + +   T  + EA             +                             
Sbjct: 295 SQLGQLVGEPTEVLKEAQTLLCSHGIDDAGLEQLREIIKTLEFYNLDSSQISLDLGLSRG 354

Query: 326 -------------------GSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALKSL 365
                                + GGGRYD LV  F   Q+ PATGFS G+ RL +AL++ 
Sbjct: 355 LQYYTGMIFEIYHGAGKQERQICGGGRYDDLVGTFGGRQDTPATGFSYGMERLRLALEAE 414

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                  ++M       +    D         Q LR  G+   M L   K+  +  +YA+
Sbjct: 415 GKVWQVQRQMDA---LVVPVSQDDAGYAIGVAQQLRQIGLAVAMDL-RGKSVSSNFQYAN 470

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           ++  P  I+ G+ ER    + +K +  G++    + +        + ++T
Sbjct: 471 KQGIPYTILVGSEERQASNVVLKQMDSGEQQQLTVSDAAKHIHDGLKRMT 520


>gi|228998112|ref|ZP_04157711.1| Histidyl-tRNA synthetase 1 [Bacillus mycoides Rock3-17]
 gi|228761647|gb|EEM10594.1| Histidyl-tRNA synthetase 1 [Bacillus mycoides Rock3-17]
          Length = 433

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 126/463 (27%), Positives = 214/463 (46%), Gaps = 42/463 (9%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           ++     +G  D    E  +RN+I  +    +E YG  P+ETP L   + +         
Sbjct: 3   QMDVRNVKGTKDYLPAEQLLRNKIKRACEETFERYGCKPLETPTLNMYELMAYKYGGGAE 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +++L+D   + I+LRYDLT P A+ VA N   I  P + Y IG VFR+     GRF
Sbjct: 63  ILKEMYTLRDQGNREIALRYDLTIPFAKVVAMN-PDIRLPFKRYEIGKVFRDGPIKQGRF 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+FIQCDVD VG  +  A+AE+  M  D  + + +   D  I  NNRK+L GIL+ + + 
Sbjct: 122 REFIQCDVDIVGVESVIAEAELMAMAFDLFKTLNL---DVTIQYNNRKLLTGILKSVEIQ 178

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +    +   V+ ++DKL+K G+ GV+  L            +   + +  I+++   + 
Sbjct: 179 DE----QTNDVILSLDKLEKIGIDGVRKDL------------QSRGIVNGTIEVVCHTVE 222

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             +   ++E  ++   ++   +G NEL  + + +   G   N +  +  + RGL  YTG 
Sbjct: 223 SCMTLELNEFKQIFSNSLVT-EGINELQQLQQYLLALGIQDNTV-FNPFLARGLTMYTGT 280

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALK 363
           VYE  L    +           +G GGRYD ++   R    + P  G S G+  +  AL 
Sbjct: 281 VYEIFLTDGSITSS--------IGSGGRYDNIIGAFRNDNTSYPTIGISFGLDVIYTALT 332

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGSSKNFGNQLK 422
             E       E     I  +  +++   +    TQ+LR+    + E+ L + +     L 
Sbjct: 333 QKE------TESTCADIFIIPINTEV--ECLRITQLLRSKSTFKVELEL-AGRKLKRSLN 383

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           YA++ N P  +I G  E S   + ++++ +G E+   +   E 
Sbjct: 384 YANKENIPYVLIIGDTEISTETIVLRNMKEGTEMKLPLSCIED 426


>gi|325912101|ref|ZP_08174499.1| histidine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476051|gb|EGC79219.1| histidine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 428

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 100/470 (21%), Positives = 180/470 (38%), Gaps = 57/470 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +R + P+G  D         +++ +  +N +    +  I TP+ E  +   +   +  D 
Sbjct: 1   MRVQKPKGTVDILPDTSYQWDKVENIAKNFFRKANYQEIRTPMFENYEIFSRSSGESSDV 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TA + R   EN         P   + I  +FR E+   
Sbjct: 61  VEKEMYDFMDKGDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYNVFYIASMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----NNRKILDGI 178
           GR R+F Q  V++ GS    AD E  ++  D L  +GIK+ + HI        R      
Sbjct: 121 GRQREFHQIGVESFGSDNALADVETIVLAHDLLSTLGIKKYELHINSLGNEAVRTAYRQA 180

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L        DKL++        D   +     +++L  +   D                 
Sbjct: 181 LVDYFTPIKDKLSD--------DSQRRLKTNPLRILDSKDEEDIEF---------VSNAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  +L  + +K+   + + +          ++L                       VRG
Sbjct: 224 RIRDYLDDESKKNFEFIIKTLSELKIDYVLDDDL-----------------------VRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG ++E ++    + + +      ++ GGGRY+ LV  F G   PA GF IG  RL
Sbjct: 261 LDYYTGVIFEFMVEDTSLWQSKT-----TILGGGRYNHLVEEFDGPKTPAVGFGIGEERL 315

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ LK+       +     +     +   ++++K     + LR  G++ +  +   K   
Sbjct: 316 MLVLKAQN---PELLTDSNIDFYITNIGEETITKTVEIARELRNQGLKIQYDV-EQKKLK 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            Q K AD+      I  G  E     L IK L+ GK  +  +    +  +
Sbjct: 372 AQFKKADKAKAKYVITLGVQEIEENTLNIKRLSDGKSYAFNMDEIANVND 421


>gi|189485540|ref|YP_001956481.1| histidyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226737081|sp|B1H0I8|SYH_UNCTG RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|170287499|dbj|BAG14020.1| histidyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 414

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 98/467 (20%), Positives = 178/467 (38%), Gaps = 63/467 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D         + +    + I++ +GF+ + TP+ E +    + +    D 
Sbjct: 1   MNYKAPRGTHDIFGINASGMSWLEQKAKVIFKRHGFEEVRTPVFEDAALFMRSIGQTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGR 124
             K ++  +D   + ++LR + TA L R   E+   +  P  R + +G +FR E+   GR
Sbjct: 61  VEKEMYIFEDRKKRKLALRPEGTASLVRAFIEHRMDVSMPAGRFFYMGEMFRYERPQAGR 120

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +RQF Q   +  GSS+  ADAE+ ++    L +VGI   + +I            EK   
Sbjct: 121 YRQFHQIGAEFFGSSSPAADAEIIILAQHLLSSVGINEMNIYINSLG-------CEKCRP 173

Query: 185 HGDDKLNERLIVLR--AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
              + L + L  +R    D L +     +++L  +  ++               +  M  
Sbjct: 174 FFRETLVKYLGSVRDLCEDCLRRLEKNPLRILDCKTDSNKFTA-----------VPRMSD 222

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +L    + +      L+K           L                       VRGL+YY
Sbjct: 223 YLCNCCKDNFSLTQSLLKSVGYNYTVDERL-----------------------VRGLDYY 259

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  V+E                  ++  GGRYD LV    GQ+ PA GF++G  R+++A+
Sbjct: 260 TKTVFEI--------RSDAVGSQCALAAGGRYDNLVGELGGQDTPAVGFALGSERVLLAV 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT-QMLR-----TAGIRAEMFLGSSKN 416
           +      +  +      I     D +  S+   +  + +R        I       + K+
Sbjct: 312 QKTGFFGSFQESEK---IFIAVADQELFSEAFSFAVKAMRNGLKGNKNISV-FGPINGKS 367

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             +QLK+AD+      I+    E   G   +K++    +    I   
Sbjct: 368 LTSQLKFADKIKAVKTIVFARTEFEYGKFLMKNMKDKTQTEFLISEF 414


>gi|156100427|ref|XP_001615941.1| histidine -- tRNA ligase [Plasmodium vivax SaI-1]
 gi|148804815|gb|EDL46214.1| histidine -- tRNA ligase, putative [Plasmodium vivax]
          Length = 1055

 Score =  200 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 113/540 (20%), Positives = 203/540 (37%), Gaps = 94/540 (17%)

Query: 3    KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
            K      ++P+G  D   +++++RN   D I+  +  +G   I+TP+ E  ++L     +
Sbjct: 543  KNINFNLKVPKGAKDFTGEDMQLRNIFFDFIKKKFLLHGAVEIDTPIFELKETLTDKYGE 602

Query: 63   EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR----TYRIGPVFRNE 118
            +   +K +F L+D  G+ +SLRYDLT PL R+V  N    +          R  P     
Sbjct: 603  D---SKLIFDLKDQGGENLSLRYDLTVPLYRFVNTNNLNSLKRFHIGKVYRRDEPSMNRG 659

Query: 119  KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
            +        F      +   +       +  +  D L  +     +++  IN+RKIL+ +
Sbjct: 660  RFREFYQCDFDIVGKYDTVRTDFH----ILFIFWDILNNLKKVIGNFNCKINHRKILEYM 715

Query: 179  LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            L    +H D    +   +  +IDKLDK   Q  +  L                +  E +D
Sbjct: 716  LLSSNIHKD----KVKTISSSIDKLDKITFQQFRDEL-----------LNEKGIPVESVD 760

Query: 239  IMVSF----LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR------KSGYNSNR 288
             + ++    LS+     +  L   +  +   E   NE+  +   +       K     N+
Sbjct: 761  KIETYISKTLSLSPFLVIEFLRNDLNESPFDEAYKNEVYQVINHLEEIFELLKHFNMLNQ 820

Query: 289  IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
                 ++ RGL+YYTG ++E +L              GSV  GGRYD L+   + + +P+
Sbjct: 821  FSFDLSLARGLDYYTGIIFEFVLLSET--------GLGSVAAGGRYDYLIRNKRKEYIPS 872

Query: 349  TGFSIGISRLIVALKSLESSTNNIK----------------------------------- 373
             G S+GI R+I   + +                                           
Sbjct: 873  VGASVGIERIIAIAEGVVKKGGLFVGPGGGGLLTKKEVTVEDSPHGKVASSGNAASPGLA 932

Query: 374  -EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             +   V +   +   +   +     + L    I  E      +    QL YA  +  PLA
Sbjct: 933  LKDNSVEVLICNIKKNCFKETIELCKKLWEEDISTEFIYVKDQKIQKQLVYALEKQIPLA 992

Query: 433  IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            +I G  E  RG++++++L + KE S               +  I + + V  +K   +EN
Sbjct: 993  VIIG-DEIERGVIKLRELTQDKEKSA-------------GEQEIKLEDCVQEIKSYFREN 1038


>gi|297527438|ref|YP_003669462.1| histidyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297256354|gb|ADI32563.1| histidyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 429

 Score =  200 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 108/461 (23%), Positives = 200/461 (43%), Gaps = 48/461 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     + PRG  D    + ++   ++D  R I    GF PI TP++E+        
Sbjct: 1   MKKEL---IQTPRGVRDLVGIDAQLHEYLIDKFRKISMLNGFKPINTPVIEFFKLFEVKS 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E    K ++  +D  G+ ++LR ++TA + R   ++      P R Y +G  FR E+ 
Sbjct: 58  GEE--IKKSMYVFKDKAGRLLALRPEITASIVRAYLKHMQGWTKPIRLYYVGQCFRYEEP 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F Q  ++ +G     AD       +  LE +GIK   ++  + N  I   I+ 
Sbjct: 116 QRGRYREFWQAGLEIIGDKNINADISAAYTASKYLEEIGIK---HYYLVGNVAIYRAIMS 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS-EQIDI 239
           K  L  +++                     V  L+ +   D +  + K  N    E I+ 
Sbjct: 173 KYNLPVEEQ-------------------DHVLHLIDKKIIDEALHYLKQKNEELYEIIEK 213

Query: 240 MVSFLSIDLEKSMHELYELV-KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++      LE  + +  E+  +     ++  N+L++    +++ G+N+       ++VRG
Sbjct: 214 LLQTPLNKLEDFLEQYREIFGEKYEQLKEEVNKLIIFINNLKEIGFNTI---YDPSLVRG 270

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L YYTG ++E          K    +  S+GGGGRYDGL   + G    +TG ++G+ R+
Sbjct: 271 LAYYTGLIFE---------YKAAKGLDISIGGGGRYDGLTEIYGGTYEYSTGLALGLDRI 321

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ +K +  +        P+    +   +  ++      + L + GI + +F  +     
Sbjct: 322 MLVMKEINYNPPK-----PISALIIILGNTPITIGYKIQERLSSIGISSWVFTTN--KLR 374

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
             L  A++ N   AII G  E     L IKDL   ++++  
Sbjct: 375 KALSIANKENMDFAIIIGEKEYREEKLSIKDLQAKEQITIN 415


>gi|82538946|ref|XP_723899.1| histidyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478353|gb|EAA15464.1| histidyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 1031

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 123/526 (23%), Positives = 210/526 (39%), Gaps = 65/526 (12%)

Query: 1    MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
            M K      ++P+G  D   +++++RN   D I+N +  +G   I+TP+ E  ++L    
Sbjct: 520  MQKNINFNLKVPKGTKDFTGEDMQLRNIFFDFIKNKFLIHGGVEIDTPVFELKETLIDKY 579

Query: 61   PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             ++   +K +F L+D  G+ +SLRYDLT PL R+   N    +                 
Sbjct: 580  GED---SKLIFDLKDQGGESLSLRYDLTVPLYRFFNTNNLNSLKRFHIG-KVYRRDEPSM 635

Query: 121  GPGRFRQFIQCDVDNVG-SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GRFR+F QCD D VG      AD  +  +  D L  +     ++   IN+RKIL+ IL
Sbjct: 636  NKGRFREFYQCDFDIVGKYDIIKADFHILHIFWDILTNLKNVIGNFICKINHRKILEFIL 695

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                +H D    +   V  +IDKLDK   Q  +  L   +  +     K  +  S+ + +
Sbjct: 696  LSSNIHKD----KVKTVSSSIDKLDKITFQQFRDELLNEKGISVDSVDKIESYISKTLSL 751

Query: 240  MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                +   L   ++E               N L  I EL++      N+     ++ RGL
Sbjct: 752  SPFLVIEFLRNDLNESNFDENYKKDINDVINHLEQIFELLKHFNML-NQFSFDLSLARGL 810

Query: 300  EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            +YYTG ++E +L              GS+G GGRYD L+   + + +P+ G SIGI R+I
Sbjct: 811  DYYTGIIFEFVLLSDT--------SLGSIGAGGRYDYLIRNKRKEYIPSVGASIGIERII 862

Query: 360  VALK---------------------------------SLESSTNNIKEMGPVLITTMDHD 386
               +                                 ++   +    +   V +   + +
Sbjct: 863  TIAEDVVRKKMAQLVCSENTTNSDNTPSNTNANSSPNNMNDKSKLNLKDNAVEVLICNTN 922

Query: 387  SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
             ++  +     + L    I  E    + +    Q  YA  +  PL II G  E  RG+++
Sbjct: 923  KNAFKQTIELCKKLWDENIATEFVYFNDQRLQKQFSYALEKQIPLVIIIG-DEIERGVIK 981

Query: 447  IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            +++L                +   V    I +++ V  +K     N
Sbjct: 982  LRELT-------------LDKSKSVGDKEIKLADCVQEIKNYFNCN 1014


>gi|296273497|ref|YP_003656128.1| histidyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296097671|gb|ADG93621.1| histidyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 407

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 98/465 (21%), Positives = 177/465 (38%), Gaps = 60/465 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           MGK+     +  RG  D   KE  +    +++   I +NYGF  +ETP+LE +    + +
Sbjct: 1   MGKQN---IQSLRGMNDILGKESELFTYFVENASRIAKNYGFTYMETPILEETALFKRSV 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNE 118
            +  D  NK ++   D     + LR + TA + R   EN  D      + Y  GP+FR E
Sbjct: 58  GESSDIVNKEMYQFIDKGENDVCLRPEGTAGVVRSFVENKFDRAGGTYKWYYYGPMFRYE 117

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR R+F Q   +  G  +   DA + MM+ + L+  GI        +     +   
Sbjct: 118 RPQKGRLREFHQFGCEVFGIDSVYEDANIIMMLKEILDFFGIDFTLQLNSLGCPICMPPY 177

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E +      K+   +      D   +     +++L  +     S               
Sbjct: 178 KENLV-----KVLTNIKTELCEDCNRRIETNPIRVLDCKNEKCQSLLI---------NAP 223

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   L    +    +L E++                        +N+    I S +VRG
Sbjct: 224 KITDNLCEKCDSDFEKLKEILD-----------------------FNNINYVIDSNLVRG 260

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY+   +E                  ++ GGGRYD LV    G+  P  GF+IGI RL
Sbjct: 261 LDYYSQTAFEFTSNE--------IGAQSAIAGGGRYDRLVEFLGGRATPGIGFAIGIERL 312

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +  +K  +   +         I     + ++L+         R    +  +   + ++FG
Sbjct: 313 LELIKQKDIKEDT--------IYLGAMNEEALNTITKVALKKRKTT-KTIIEY-APRSFG 362

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              K A +    +  + G  E + G + IK++   +E + ++++ 
Sbjct: 363 KHFKIAQKHGANIVALIGETELNNGTIYIKNIDTQEEQNLKLEDF 407


>gi|262341145|ref|YP_003284000.1| histidine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272482|gb|ACY40390.1| histidine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 470

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 121/486 (24%), Positives = 211/486 (43%), Gaps = 66/486 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
             +P+G  D  + E+R RN ++ +IR  +E +GF PIETP  E   +L GK+  + D   
Sbjct: 4   PNIPKGTRDFSSIEMRKRNYLIQTIREKFELFGFFPIETPSFEKISTLIGKYGKEGDYL- 62

Query: 68  KGVFSLQDDDGQWI-------------------------------SLRYDLTAPLARYVA 96
             +F L    G  +                               +LRYDLT P  RYV 
Sbjct: 63  --MFKLL-HSGHVLKKRISDVFRRINNKEKTVDVTKFLTEHISNKALRYDLTVPFVRYVG 119

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS-AETADAEMCMMMADTL 155
            + + IVFP + Y+I PV+R +K   GRFR+F QCD D +  S +   + E+  +  +  
Sbjct: 120 MHKNEIVFPFKRYQIQPVWRADKPQKGRFREFYQCDADIISYSWSLWKEIELIQLCDEIF 179

Query: 156 EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
             +        I IN+R IL G++E  G+    K N       ++DK DK G   VK  +
Sbjct: 180 TKLNFPI---IIYINHRDILGGLVEISGI----KNNLWKDFTTSLDKWDKIGRDLVKKEM 232

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELV 273
                        G  ++S+  + +  F  +  +  K    L    + +  G+KG  +L 
Sbjct: 233 L------------GKGISSQSFEKIAFFFDMKENFYKKEKYLTVAFQYSKKGKKGIKDLS 280

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
            I + ++     + +++ + ++ RG+ YYTG + E +      +     +  G      R
Sbjct: 281 FIYQNIKSISLQNTKLEWNISLARGMNYYTGTILEIVPFHNNSSSNSISIGGGG-----R 335

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           YD L + F  +N+   G S+G+ R+ +A++             P  +  ++   + +   
Sbjct: 336 YDQLANLFGMKNISGVGISLGLDRIYLAMEKENL--LQTISNYPSKVLFINFGDEEVLYA 393

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
               + LR  GI  +++  + +  G Q +YA+  N P  I  G  E  R  +++K+L + 
Sbjct: 394 YKMIKFLRKKGISTQLYPHAVQ-IGKQFRYANENNIPFTISIGKNEIQRNKIRVKNLKER 452

Query: 454 KELSRE 459
            E   +
Sbjct: 453 TEKEYD 458


>gi|307543975|ref|YP_003896454.1| histidyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307215999|emb|CBV41269.1| histidyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 428

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 103/506 (20%), Positives = 182/506 (35%), Gaps = 94/506 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    + +  RG  D    +  +       +R +   YG+D I TP+LE +    + +
Sbjct: 1   MSK----KIQAIRGMNDLLPAQAPLWQYFEQQVRTLMGRYGYDEIRTPILEQTALFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   EN        R +  GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFEDRNGDSLTLRPEGTASCVRAAMENGLLHNQTQRLWYQGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  V+  G      DAE+ ++ A   + +G+                   
Sbjct: 117 PQKGRYRQFHQVGVETFGLEGPDIDAEVILLSARLWKQLGLFEHVTLELNSLGSPEARAA 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L    E      D+            D   +     +++L  +             
Sbjct: 177 YRDKLVSYFEAHLDVLDE------------DSRRRLSTNPLRILDSKNPAMADM------ 218

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                    ++  L  +  +    L  ++                               
Sbjct: 219 ---LADAPRLMDHLDAESREHFERLTAILDAA-----------------------GIEYV 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I+  +VRGL+YY+  V+E                 G+V  GGRYDGLV +  G+ VPA G
Sbjct: 253 INPRLVRGLDYYSRTVFEWTTEA--------LGSQGTVCAGGRYDGLVEQLGGKPVPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ-----MLRTAGI 405
           F++GI RLI+ L++LE   + + +   V +  M   +++ +             LR    
Sbjct: 305 FAMGIERLILLLETLELVPDAVHDTLDVYLLPMGEAAEAAALELAERLRDDLPALRLQ-- 362

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
                      F ++++ AD+    LA++ G  E +   + +K                 
Sbjct: 363 ----LHCGGGGFKSRIRKADKSGARLALLLGEEELAENAVTLK----------------- 401

Query: 466 WREARVAQITIPISELVSTVKKILQE 491
           +      Q  +  SEL   +  +L E
Sbjct: 402 FLREEREQRRLSRSELAPALADLLSE 427


>gi|268679912|ref|YP_003304343.1| histidyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617943|gb|ACZ12308.1| histidyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 402

 Score =  199 bits (506), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 94/456 (20%), Positives = 173/456 (37%), Gaps = 60/456 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               RG  D  + E  + + I+ +   I   YGF  IETP+LE +    + + +  D   
Sbjct: 2   INALRGMKDTLSPENEVYDYIIKTCTRIAHRYGFSLIETPILEETALFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++  +D     + LR + TA + R   +  +D      R +  GP+FR E+   GR R
Sbjct: 62  KEMYQFRDKGDNDVCLRPEGTAGVVRAFIQQKYDKAGGTRRFFYHGPMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V++ G +    DA + +M+   L+A+ I  +     +     +     K+    
Sbjct: 122 QFHQFGVESFGEADVREDATIILMLKTMLDALDIGYSLEINSLGCPSCMPTYRSKLVTFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++            D   +     +++L  + + ++     K A L       ++  L +
Sbjct: 182 ENTEGL------CEDCERRKLTNPIRVL--DCKNEHCKTLLKNAPL-------IIEHLCL 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             ++    L  ++                               ++  +VRGL+YY+   
Sbjct: 227 TCKEDFETLKRILDTFE-----------------------ISYHVNPKLVRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          +     ++ GGGRYD LV    G+  PA GF++GI RL+  +K   
Sbjct: 264 FEFV--------SSEIGAQSAIAGGGRYDRLVEFLDGKATPAVGFAMGIERLMDLVK--- 312

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR-TAGIRAEMFLGSSKNFGNQLKYAD 425
                + E             ++L       +  R  A  +       +K+  N LK AD
Sbjct: 313 -----MPEPTREGYYIGALCDEALDVVFRLVETKRLEA--KVLTHY-EAKSLKNHLKLAD 364

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +      +  G  E ++  + IKDL   +E    + 
Sbjct: 365 KNEAKFCVCIGEDELAKNTVWIKDLESKEEKIIAMA 400


>gi|255348920|ref|ZP_05380927.1| histidyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503460|ref|ZP_05381850.1| histidyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255507139|ref|ZP_05382778.1| histidyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525588|emb|CBJ15066.1| histidyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435148|gb|ADH17326.1| histidyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438868|gb|ADH21021.1| histidyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 428

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 97/467 (20%), Positives = 181/467 (38%), Gaps = 63/467 (13%)

Query: 7   LRAELPRGFADCPT---------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +   LP+G  D            +   +  R+  +   I   YGFD I TP+ E +++  
Sbjct: 1   MSNALPKGVFDIFPYVTSPKNLWRNSSLWKRVEHAAHRICNLYGFDEIRTPVFEKTETFL 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           +     D   K V++  D   + ++LR + TA + R + ++   +    + Y I P+FR 
Sbjct: 61  RVGEYSDIVKKEVYTFLDKKRRSLTLRPEGTAAVVRALLDHSADMRKDNKFYYILPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q  ++ +G      DAE+  ++ D   AVG++    H+     +    
Sbjct: 121 ERQQSGRYRQHHQFGLEAIGVRHPLRDAEVLSLLWDFYAAVGLQHMQIHVNFLGGQKTRA 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             ++       K  +RL  L      +++    +++L  +   D             E+ 
Sbjct: 181 RYDEALREFFRKDLDRLSPLS----QERYHANLLRILDSKEPEDQEFI---------EKA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ ++                          +L     ++ +         I+  +VR
Sbjct: 228 PSILDYIDD-----------------------RDLSYFDAVLAQLKALGIPFAINPRLVR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYT  V+EA+      +          +GGGGRYD LV++  G ++PA GF +G+ R
Sbjct: 265 GLDYYTDLVFEAVTVVGEHSYA--------LGGGGRYDELVAQSGGPSMPAFGFGVGLER 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +I  L    +  +         +  +  D  + +    +   LR  GI  E+   S K  
Sbjct: 317 VIQTLLEQGNFLSTSTRR----LRLIPMDEQADAFCFSWANRLRNLGIATEVDW-SHKKP 371

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-----KGKELSRE 459
              LK A  +      + G  E +     +KD++      G +   E
Sbjct: 372 KLSLKDAADQQVSFVCLLGEQELATKQFIVKDMSLHQSFSGAQQDVE 418


>gi|227495479|ref|ZP_03925795.1| histidine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831026|gb|EEH63409.1| histidine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 442

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 139/486 (28%), Positives = 216/486 (44%), Gaps = 62/486 (12%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +   +   I N ILD +R  +E +GF  +ET  +E  D L +        +K V+ 
Sbjct: 8   SGFPEWLPEGRIIENAILDHLRKTFELHGFASLETRSVETLDELQRKGE----TSKEVYI 63

Query: 73  LQ----------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           L               + + L +DLT P AR+V EN  ++ FP R Y+I  V+R E+   
Sbjct: 64  LNRLQELKEERSSKKERPLGLHFDLTVPFARFVIENAGSLAFPFRRYQIQKVWRGERPQD 123

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GRFR+F+Q D+D VG  A     E+ + +       G+      + +NNRK++ G  E I
Sbjct: 124 GRFREFMQADIDIVGDGALAFHHEVELPLVMIEALSGLPIPPVTVLVNNRKVVQGFCEGI 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+   +        LRAIDKLDK G +GV   + E              +++EQ + ++ 
Sbjct: 184 GIESVEDA------LRAIDKLDKIGAEGVMAEMLEN------------GISAEQGEKLLE 225

Query: 243 FLSIDLEKSM-HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             +I +E  +   +  L         G  EL  +   +  +     R+     I RGL+Y
Sbjct: 226 MAAIRVESGVTDAVLALGVDNETLRAGLEELDALL--IAATKRAPGRVVADLKIARGLDY 283

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE +L              GS+  GGRYD L +  K    P  G SIG+SRL+  
Sbjct: 284 YTGSVYETVLEG--------HEDLGSICSGGRYDSLATNGKRT-YPGVGLSIGVSRLVSR 334

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +   E    +      VL+    +D +  S+       LR+ GI  E+   S+K FG Q+
Sbjct: 335 ILGQELVHASRSVPSCVLVAV--NDEEHRSEADDIAYALRSRGIPTEVSPNSAK-FGKQI 391

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K+AD+R  P            G+  +KD+  G+++     +  +W          P ++L
Sbjct: 392 KFADKRGIPFVWFTNEE----GVSTVKDIRTGEQVE---ADAATWMP--------PATDL 436

Query: 482 VSTVKK 487
           + TV K
Sbjct: 437 LPTVVK 442


>gi|83753553|pdb|1WU7|A Chain A, Crystal Structure Of Histidyl-Trna Synthetase From
           Thermoplasma Acidophilum
 gi|83753554|pdb|1WU7|B Chain B, Crystal Structure Of Histidyl-Trna Synthetase From
           Thermoplasma Acidophilum
          Length = 434

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 113/465 (24%), Positives = 193/465 (41%), Gaps = 43/465 (9%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +L+ E  RGF D   ++  +   I  +     E +GF  I+ P LEY D       +E  
Sbjct: 3   RLQIEKIRGFRDFYPEDXDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEE-- 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             +  +S  D  G+ ++L  + T    R V      +  P R Y    V+R E+   GR+
Sbjct: 61  LLQQTYSFVDKGGREVTLIPEATPSTVRXVTSRK-DLQRPLRWYSFPKVWRYEEPQAGRY 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+  Q + D  GS +  ADAE+  + +  L+ +G+ ++ Y I IN+RKI + I+      
Sbjct: 120 REHYQFNADIFGSDSPEADAEVIALASSILDRLGL-QDIYEIRINSRKIXEEIIGGXTSS 178

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 +   V   ID+  K   +               D  + A +  + +  +    S
Sbjct: 179 ------DPFSVFSIIDRYHKISREEF------------VDQLRSAGIGEDGVSXIADLCS 220

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + + E   +   +    +       + +L+   G  + R   S  IVRGL YYTG 
Sbjct: 221 --GTRGIDEXARITGKS---SEEIARXAAVEDLLASYGVKNVRYDFS--IVRGLSYYTGI 273

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+EA           +   F ++ GGGRYD L S   G++VPA GF  G + + + LK  
Sbjct: 274 VFEAY---------DRSGQFRAILGGGRYDNLASLXSGESVPAVGFGXGDAVISLLLKRE 324

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                  K+   V I  +   + S+     Y++ LR  G    + +   +    QLKYA 
Sbjct: 325 NVQIPREKK--SVYICRVGKINSSIXN--EYSRKLRERGXNVTVEIXE-RGLSAQLKYAS 379

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 A+I G  +  RG++ I++   G + +  + +      ++
Sbjct: 380 AIGADFAVIFGERDLERGVVTIRNXYTGSQENVGLDSVVEHLISQ 424


>gi|89095335|ref|ZP_01168253.1| Histidyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89080410|gb|EAR59664.1| Histidyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 413

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 97/462 (20%), Positives = 186/462 (40%), Gaps = 69/462 (14%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++  +   +  +++++   YG+  I  P++E ++   + + +  D   K +++ 
Sbjct: 1   MNDILPEQSPVWQYLETTVKDVLAAYGYSEIRMPVVEQTNLFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D +G+ ++LR + TA   R   E+        R +  GP+FR E+   GR+RQF Q  V
Sbjct: 61  EDRNGESLTLRPEGTASCVRAAEEHGLLFNQMQRFWYQGPMFRYERPQKGRYRQFHQIGV 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVG-----IKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +  G ++   DAE+ ++ A   + +G       + +       R      L +      D
Sbjct: 121 ETFGMASSDIDAEVILLSARLWKRLGLLDSVTLQLNSLGSNEARAEYKAALVEYLEQRKD 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L+E        D   + G   +++L  +          +G     +   ++  +L  + 
Sbjct: 181 QLDE--------DSQRRLGSNPLRILDSKE---------QGTQSLLDGAPVLTDYLDEES 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +   EL  ++       +    L                       VRGL+YY   V+E
Sbjct: 224 AQHFAELRAMLDEAGVKYEINPRL-----------------------VRGLDYYCKTVFE 260

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            +          K    G+V  GGRYDGLV +  G+  PA GF++G+ RLI+ L++L+  
Sbjct: 261 WVT--------DKLGAQGTVCAGGRYDGLVKQLGGRPTPAVGFAMGVERLILLLETLDLI 312

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADR 426
              +K+  P  +          SK  + +  LR    G+R  +  G  KN     + A +
Sbjct: 313 PEQLKQ--PFDLYVAAEHKGIQSKVVLISDQLRDRFPGLRVRIHCGGLKNIS---QKAQQ 367

Query: 427 RNCPLAIIQGTGERSR--GMLQIK-----DLAKGKELSREIK 461
              P+ ++    +     G +  K     DL  G+++   I 
Sbjct: 368 TGAPIVLLLKETDNQSLCGTVWHKNEPEFDL-TGEQIEAAIA 408


>gi|297583175|ref|YP_003698955.1| histidyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297141632|gb|ADH98389.1| histidyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 433

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 119/463 (25%), Positives = 199/463 (42%), Gaps = 36/463 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K K      +G      ++ R+R RI  ++ +++  YG +P+ETP+L  +  +    
Sbjct: 2   MSMKKKQEDLNVKGTVTYMPEKERVRRRIRRTLEDVFIRYGCEPLETPILNQASLMTDKY 61

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  K ++ L D   + ++LRYDLT P AR    N  T+  P + Y IG VFR+   
Sbjct: 62  GGGAEIVKEMYRLTDQGERDLALRYDLTMPFARVCVMN-PTLRKPFKRYEIGKVFRDGPI 120

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR+R+F QCDVD +G S++ A+AE+ +M  D  E +G+      I  NNRK L G+L+
Sbjct: 121 KAGRYREFTQCDVDVLGVSSQLAEAELMIMALDAFERLGMA---VTIQYNNRKFLTGLLD 177

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+      +  L +                  L +       D      +T +  + +
Sbjct: 178 VFGVPESLIPSAVLTL----------------DKLEKKGAAAVLDELLVKGVTEDVTERI 221

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +FL+      +  +     G+   E+G  EL  ++  +  +G   ++   +  + RGLE
Sbjct: 222 GAFLTAGDAADIERIRVYGNGSQQVEEGAAELQELTSFLGATGT-LDQCVFNPFLARGLE 280

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN--VPATGFSIGISRL 358
            YTG VYE     P            S+  GGRYD  V    G +   P+ G S G+  +
Sbjct: 281 IYTGTVYEVFSAEPGALS-------SSIASGGRYDQAVGGLSGSDEGYPSVGISFGLDVI 333

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              L+S        +++  ++I   +          +  Q LR  G   E+ + S K  G
Sbjct: 334 TTVLESRIDEEIQEEKVDCLIIPVGEPQ-----AALVLAQALRAQGTSVELDM-SGKKPG 387

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             L+ A+R      I+ G+ E   G+  +K +  G+E +    
Sbjct: 388 KALERANREGVRDVILIGSDEVETGIYTVKRMKTGEEEAVSFS 430


>gi|15605272|ref|NP_220058.1| histidyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789280|ref|YP_328366.1| histidyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237802972|ref|YP_002888166.1| histidyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804894|ref|YP_002889048.1| histidyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311361|ref|ZP_05353931.1| histidyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317662|ref|ZP_05358908.1| histidyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|7674346|sp|O84547|SYH_CHLTR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|123606800|sp|Q3KLF4|SYH_CHLTA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|3328982|gb|AAC68145.1| Histidyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167810|gb|AAX50818.1| histidyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273194|emb|CAX10107.1| histidyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274206|emb|CAX11000.1| histidyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296436076|gb|ADH18250.1| histidyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437004|gb|ADH19174.1| histidyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437937|gb|ADH20098.1| histidyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140437|gb|ADH97195.1| histidyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 428

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 98/467 (20%), Positives = 182/467 (38%), Gaps = 63/467 (13%)

Query: 7   LRAELPRGFADCPT---------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +   LP+G  D            +   +  R+  +   I   YGFD I TP+ E +++  
Sbjct: 1   MSNALPKGVFDIFPYVTSPKNLWRNSSLWKRVEHAAHRICNLYGFDEIRTPVFEKTETFL 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           +     D   K V++  D   + ++LR + TA + R + ++   +    + Y I P+FR 
Sbjct: 61  RVGEYSDIVKKEVYTFLDKKRRSLTLRPEGTAAVVRALLDHSADMRKDNKFYYILPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q  ++ +G      DAE+  ++ D   AVG++    H+     +    
Sbjct: 121 ERQQSGRYRQHHQFGLEAIGVRHPLRDAEVLSLLWDFYAAVGLQHMQIHVNFLGGQKTRA 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             ++       K  +RL  L      +++    +++L  +   D             E+ 
Sbjct: 181 RYDEALREFFRKDLDRLSPLS----QERYHANLLRILDSKEPEDQEFI---------EKA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ ++                          +L     ++ +         I+  +VR
Sbjct: 228 PSILDYIDD-----------------------RDLSYFDAVLAQLKALGISFAINPRLVR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYT  V+EA+      +          +GGGGRYD LV++  G ++PA GF +G+ R
Sbjct: 265 GLDYYTDLVFEAVTVVGEHSYA--------LGGGGRYDELVAQSGGPSMPAFGFGVGLER 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +I  L    +S +         +  +  D  + +    +   LR  GI  E+   S K  
Sbjct: 317 VIQTLLEQGNSLSTSTRR----LRLIPMDEQADAFCFSWANRLRNLGIATEVDW-SHKKP 371

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-----KGKELSRE 459
              LK A  +      + G  E +     +KD++      G +   E
Sbjct: 372 KLSLKDAADQQVSFVCLLGEQELATKQFIVKDMSLHQSFSGAQQDVE 418


>gi|323455262|gb|EGB11131.1| hypothetical protein AURANDRAFT_11148 [Aureococcus anophagefferens]
          Length = 410

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 104/440 (23%), Positives = 180/440 (40%), Gaps = 33/440 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    ++R+RN +  ++R     +GF   + P+LE+ +   +   +E   +  +
Sbjct: 2   PPSGTRDFEPGDMRVRNWLFGAMRETALEFGFKEYDAPVLEHVELYERKAGEE--ISSQM 59

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++  D +G  ++LR ++T  LAR  A        P + + I   +R E    GR R+  Q
Sbjct: 60  YNFVDKEGARVTLRPEMTPSLARM-ATGEVRATLPLKWFSIPQCWRFETTQRGRKREHYQ 118

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
            ++D VG    TA+AE+   +A     +G+      + +N+RK+LD  + K G+ GD   
Sbjct: 119 WNMDIVGERGVTAEAELLAAVARFFSRLGVTSEMVGVRVNSRKVLDVAITKAGVPGD--- 175

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            +   V   IDKLDK G   VK +L +   D+         L     D++++ L      
Sbjct: 176 -KFARVCVVIDKLDKIGACAVKEMLTDTSGDDPLA------LPPATADVILACLEAKSVA 228

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +     L     A  +           +  S    + ++  S++VRGL YYTG V+EA 
Sbjct: 229 DLATTVGLPMTDPAIAEIAQLFE-----LADSYGVGDYLQFDSSVVRGLAYYTGVVFEAF 283

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF--KGQNVPATGFSIGISRLIVALKSLESS 368
                     +     ++ GGGRYD L+  +  +  ++P  GF  G   ++  LK     
Sbjct: 284 ---------DRKGELRAICGGGRYDKLLELYGGEKCDIPCAGFGFGDCVIVELLKENGLL 334

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                    V +      +            LR+AG+  +  L + K        A+R  
Sbjct: 335 PKLGPS---VDVVVAPFSAAMQGPAAAVAAKLRSAGLTVDAALQACKA-RKAFDLANRAG 390

Query: 429 CPLAIIQGTGERSRGMLQIK 448
             L       E   G +++K
Sbjct: 391 ARLVAFVAPDEWDVGKVRVK 410


>gi|309810347|ref|ZP_07704182.1| histidine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308435660|gb|EFP59457.1| histidine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 449

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 126/488 (25%), Positives = 204/488 (41%), Gaps = 52/488 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T +      GF +    +      +LD IR ++E +GF+PI T  +E  + L    
Sbjct: 1   MSKPTPI-----SGFLEWLPAQRYTEQLVLDIIREVFELHGFEPINTRAVEPVERLTGKG 55

Query: 61  PDEDRPNKGVFSL-------QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            D D   K ++++        D     + L +DLT P +RYV EN   + FP R Y+I P
Sbjct: 56  GDAD---KEIYAVSRLAAEEADKAEPGLGLHFDLTVPFSRYVIENAGKLTFPFRRYQIQP 112

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GR+R+F+Q D+D V         E+ + +        +   ++ I +NNRK
Sbjct: 113 VWRGERPQAGRYREFVQADIDIVDVGELPFHYEVELPLVIADVFKRLPIGEFRIQVNNRK 172

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           I +G    +G+       + +  LR +DKLDK G   VK LL                + 
Sbjct: 173 IPEGFYRGLGID------DIVGTLRIVDKLDKIGPAKVKELLVAE------------GVE 214

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
               D +++  +I    +  + ++  L       E+G  +L V+ E    + +    +  
Sbjct: 215 DAATDKILALAAISTPDTSFVEQVRALGVEHPTLEEGLEQLRVVVE--TAAEHAPGLLVA 272

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
              I RGL+YYTG VYE  L             +GS+  GGRYD L S  K       G 
Sbjct: 273 ELKIARGLDYYTGTVYETQLVGEE--------GYGSICSGGRYDSLASDGKRTYP---GV 321

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            + I    +  K +           P  +    +D  S ++       LR  GI   +  
Sbjct: 322 GLSIGVSRLLAKLIGDGGLRTSRPTPTAVLVAINDETSRAESMRIAAALRERGIPTLVSP 381

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            ++K FG Q+++ADRR  P     G GE      QIKD+  G++   +  +         
Sbjct: 382 KAAK-FGKQIQFADRRGIPYVWFPGAGETGD---QIKDIRSGEQFDADATSWVLPAADEQ 437

Query: 472 AQITIPIS 479
            ++ +  +
Sbjct: 438 VRLEVAEA 445


>gi|68171802|ref|ZP_00545142.1| Histidyl-tRNA synthetase, class IIa [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658069|ref|YP_507112.1| histidyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123736410|sp|Q2GHH1|SYH_EHRCR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|67998775|gb|EAM85487.1| Histidyl-tRNA synthetase, class IIa [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599526|gb|ABD44995.1| histidyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 413

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 105/457 (22%), Positives = 177/457 (38%), Gaps = 57/457 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRP 66
           +    RG  D    E+     I    ++I   YGF  ++TP++E+++   K L  D D  
Sbjct: 5   KLREVRGTKDLLGIELYKFQYIHRLSQSIAHRYGFIAVDTPIIEFTEVFTKTLGDDSDIV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ QD  G+ I+LR + T+ + R +      I    + +  GPVFR E+    R R
Sbjct: 65  MKEMYNFQDKSGENITLRPEFTSAIVRVLINKNLIIP--VKLFSSGPVFRYERPQKCRQR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + +  GS    AD EM  +    L+ + +  +D  + IN     +  +    L  
Sbjct: 123 QFHQVNFEFFGSDLPLADIEMIALGYHILDELKL-LDDITLEINFLGDKET-MNSYKLSL 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            + LN+    L   D   +     +++L  +   D               +  +  F S 
Sbjct: 181 IEYLNKYKKDLS-EDSQRRLITNPLRILDSKAPEDREILL---------NVPNISYFYSK 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                  E+   +          +EL +               K++ +IVRGL+YY   V
Sbjct: 231 SSNDFFAEVLYGL----------DELCI-------------PYKVNHSIVRGLDYYCNTV 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E            K     +V  GGRYDGLV    G + PA GF++G+ R+   +    
Sbjct: 268 FEFTTS--------KLGAQNAVVAGGRYDGLVKSMGGNDTPAVGFAMGVERVSALID--- 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                 K   P  +  +    D++S        LR  GI       ++ N  N L+    
Sbjct: 317 -----YKHQEPRSVVLIPIGKDAVSYALKLAYELRCNGISVNWNYKNA-NLRNALRKVGD 370

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            N    +I G  E     +Q+KD+  G++      + 
Sbjct: 371 DNI--VLIFGDEELKNNTIQVKDMKTGEQQEIVRCDL 405


>gi|254797119|ref|YP_003081957.1| histidyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590367|gb|ACT69729.1| histidyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 413

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 95/464 (20%), Positives = 187/464 (40%), Gaps = 57/464 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           ++    +G  D   +++     I    +++   Y F  +ETP++E+++   + L +  D 
Sbjct: 3   IKINNVKGTRDLFGEQLDKMRFIEQVAKDLSIRYLFTELETPIIEHTELFIRNLGETSDV 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            NK ++S +D     I LR + TA + R   ENF  I  P R +  GP+FR E+   GR+
Sbjct: 63  VNKEIYSFRDKSDHNICLRPEFTAAVTRAFVENFQHIQSPVRLFSFGPLFRYERPQKGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q + + +GS       E  ++    L  +GI+       +   +  +     +   
Sbjct: 123 RQFHQVNFEWIGSKHYLWVVEAVVLAKSFLREIGIRCEIRVNSLGCSRTREEYKLALI-- 180

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   +    L A D L +     +++L  +  ++   +   GA         ++ + +
Sbjct: 181 --DYFRQYKDYLSA-DSLLRLEKNPLRILDSKDPSEE--EIVVGA-------PKILDYHT 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D  K    + + +K                              +   +VRGL+YY+G 
Sbjct: 229 DDALKEFESICDTLK-----------------------LLDIEFSVDHRLVRGLDYYSGL 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           ++E                  ++ GGG Y+ L     G+ V + GF+ GI RLI  + + 
Sbjct: 266 IFEFTSPD--------LGAQDALLGGGAYEQLSENLGGKKVQSIGFAAGIERLIDVMPA- 316

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                  K +   +++ +     +  +       LR+ G+ A+M  G   +  +++K A+
Sbjct: 317 ------WKPVSDKIVSIVPIGEIAEREALKLLFYLRSEGLCADMCYGL--SVRSRMKRAE 368

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           R    + +I G  E S+  L +K +  G++++   +   S    
Sbjct: 369 RS--TVTVILGEEELSKRELVVKIMETGQQITVTREKLLSALRE 410


>gi|188997175|ref|YP_001931426.1| histidyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932242|gb|ACD66872.1| histidyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 410

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 93/451 (20%), Positives = 169/451 (37%), Gaps = 62/451 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RGF D   +  +    I+++ R  + +Y F  I  P +E      + + +  D  
Sbjct: 4   KFQKIRGFQDIYGENAKKYRYIVETFRKTFLDYNFQEIILPYVEDISLFKRSVGEATDIV 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRF 125
            K ++   D  G+ ++LR + TA   R   E            +  G +FR E+   GR+
Sbjct: 64  QKEMYIFTDKGGREVALRPEGTAGCVRAYIEEKMYAEGGYHKLFYEGAMFRYERPQAGRY 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   +  G S+  AD E+  M+   L+ + I        + + +     + K+  +
Sbjct: 124 RQFHQIGAEIFGVSSYLADVELISMVYKILKYLKIDFRLEINTLGDFQSRKEYISKLIEY 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                          D   +     +++L  + + ++  + TK A   +E +        
Sbjct: 184 LKKYE-----NSLCQDCRRRIHENPLRVL--DCKVESCKEITKDAPKITESLSK------ 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                                +       I E ++  G +      +  +VRGL+YYT  
Sbjct: 231 ---------------------EAIERFEKIKESLKAIGVD---FIENPRLVRGLDYYTHT 266

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E I               G++  GGRYD L  +  G   PA GF+ GI RLI+ +K L
Sbjct: 267 VFEFISQE--------IGSQGTIAAGGRYDNLAEQLGGPPTPALGFAAGIERLILLVKDL 318

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                        LI  +  + +   +    ++  R   I+ E+ L    +  + LK A+
Sbjct: 319 --------PPEKPLIVIIPLNQNYYIQALKLSEKTREKHIQTELLLKEG-SLKSMLKTAN 369

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           + N    I           L++KD+  G + 
Sbjct: 370 KFNAKYVIFV------SDKLELKDMTSGDQE 394


>gi|297748673|gb|ADI51219.1| Histidyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749553|gb|ADI52231.1| Histidyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 436

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 98/467 (20%), Positives = 182/467 (38%), Gaps = 63/467 (13%)

Query: 7   LRAELPRGFADCPT---------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +   LP+G  D            +   +  R+  +   I   YGFD I TP+ E +++  
Sbjct: 9   MSNALPKGVFDIFPYVTSPKNLWRNSSLWKRVEHAAHRICNLYGFDEIRTPVFEKTETFL 68

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           +     D   K V++  D   + ++LR + TA + R + ++   +    + Y I P+FR 
Sbjct: 69  RVGEYSDIVKKEVYTFLDKKRRSLTLRPEGTAAVVRALLDHSADMRKDNKFYYILPMFRY 128

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q  ++ +G      DAE+  ++ D   AVG++    H+     +    
Sbjct: 129 ERQQSGRYRQHHQFGLEAIGVRHPLRDAEVLSLLWDFYAAVGLQHMQIHVNFLGGQKTRA 188

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             ++       K  +RL  L      +++    +++L  +   D             E+ 
Sbjct: 189 RYDEALREFFRKDLDRLSPLS----QERYHANLLRILDSKEPEDQEFI---------EKA 235

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ ++                          +L     ++ +         I+  +VR
Sbjct: 236 PSILDYIDD-----------------------RDLSYFDAVLAQLKALGISFAINPRLVR 272

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYT  V+EA+      +          +GGGGRYD LV++  G ++PA GF +G+ R
Sbjct: 273 GLDYYTDLVFEAVTVVGEHSYA--------LGGGGRYDELVAQSGGPSMPAFGFGVGLER 324

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +I  L    +S +         +  +  D  + +    +   LR  GI  E+   S K  
Sbjct: 325 VIQTLLEQGNSLSTSTRR----LRLIPMDEQADAFCFSWANRLRNLGIATEVDW-SHKKP 379

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-----KGKELSRE 459
              LK A  +      + G  E +     +KD++      G +   E
Sbjct: 380 KLSLKDAADQQVSFVCLLGEQELATKQFIVKDMSLHQSFSGAQQDVE 426


>gi|189218097|ref|YP_001938739.1| Histidyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189184955|gb|ACD82140.1| Histidyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 405

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 99/461 (21%), Positives = 179/461 (38%), Gaps = 58/461 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   GF D    +   RN I    R     + F   + PLLE  +   K   DE      
Sbjct: 2   QPLPGFRDFYPSDCAFRNFIFSRWRESCRRFNFVEYDGPLLETIELYQKKSGDEIL--SQ 59

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++   D   + ++LR ++T  LAR +  +F     P + + I  +FR E+   GR R+  
Sbjct: 60  IYHFIDKGSRHVALRPEMTPTLARMIEAHFKEYKKPIKWFSIPQLFRYERAQKGRLREHY 119

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q + D VG +   AD E+  +  D L +  + ++D+ + +++R      L+K  +  DD 
Sbjct: 120 QLNCDIVGEADLEADIELINLAIDILLSFDLGKDDFVVRVSDRLFWTEFLKKKAIPRDDW 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                                        + ID +      ++E
Sbjct: 180 YAFF-----------------------------------------QAIDKIEREPREEIE 198

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + + +L + V   +     +    ++ E +R  G     + I   IVRGL YYTG VYE 
Sbjct: 199 RRLGDLAKEVFAILESPPCWERFEILLEGLRHRGLAE-YVCIDLGIVRGLAYYTGIVYEI 257

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                      +   F ++ GGGRYD L+ +  G+++PA GF +G   L   ++  +   
Sbjct: 258 F---------DRAGEFRAIAGGGRYDDLLKQIGGEDIPAAGFGMGDVVLGEIIRKKKVIE 308

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            +   +    +  +  +     +     + LR  G   +     SK    QL  A   N 
Sbjct: 309 PSFPRLD---VYVVFPEGKKNPQGLFLIEQLRRQGFSVDFSFCPSK-LKKQLATAQSLNA 364

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             A+I        G+++IK++ +  +L+  ++    W + R
Sbjct: 365 RFALIVSDK-IEEGVVEIKNMDERTQLTLPVEQLAGWLKER 404


>gi|255327175|ref|ZP_05368250.1| histidine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295793|gb|EET75135.1| histidine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 453

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 126/481 (26%), Positives = 213/481 (44%), Gaps = 41/481 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K  L      GF +    E  + N +LD++R  +E +GF PIET  +E  + L +  
Sbjct: 1   MARKASL-----SGFPEYLPAERLVENHVLDTLRETFELHGFSPIETRSVETIEQLLRKG 55

Query: 61  PDEDRPNKGVFSL----QD---DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
                 +K V+++    +D      + ++L +DLT P ARYV EN   + FP   Y+I  
Sbjct: 56  E----IDKEVYAISRLQEDEAAKAKEKLALHFDLTVPFARYVVENAGYLNFPFSRYQIQK 111

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GR R+F Q D+D VG        ++ + +        +   ++ + +NNRK
Sbjct: 112 VWRGERPQEGRAREFTQADIDVVGDGELPFRYDVTLALVVVDALSKLPIPEFKLRVNNRK 171

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +G      L +   VLR+IDKL+K G + V   L      ++        L 
Sbjct: 172 LAEGFYLGLG------LTDTAAVLRSIDKLEKIGAERVAEELQAEAGASADAAVAALELA 225

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 + +  +  +E+      +        ++G  EL  + E    S     ++    
Sbjct: 226 -----QIRTEDASFVEQVRALAAKYSVEHELLDQGLAELAEVIE--EASRRAPGKVLADL 278

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           +I RGL+YYTG VYE +L              GS+  GGRY+ L S  K    P  G SI
Sbjct: 279 SIARGLDYYTGTVYETVLVG--------HESLGSICSGGRYESLASNGKKT-YPGVGLSI 329

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G++R++  + S   +  + K    V +   +   +  S        LR  GI  E+   +
Sbjct: 330 GVTRVVARILSQGFAQASRKVPSAVFVALTN--DEGWSAANDVADALRARGIACEVSANA 387

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +K FG Q+KYA++R  P      + E    + ++KD+  G++++ +  +     E    Q
Sbjct: 388 AK-FGKQIKYAEKRGIPFVWFISSDESGAPVHEVKDIRSGEQVAADPASWMPPAEDLHVQ 446

Query: 474 I 474
           I
Sbjct: 447 I 447


>gi|157165317|ref|YP_001466859.1| histidyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|166227955|sp|A7ZDK1|SYH_CAMC1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|112801287|gb|EAT98631.1| histidyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 408

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/457 (19%), Positives = 173/457 (37%), Gaps = 57/457 (12%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGVF 71
           RG  D      ++  +I+ +   + +NYG++ I TP LE +    + + +  D   K ++
Sbjct: 6   RGMKDMLPARAKLYAQIIKTCEEVAKNYGYEQILTPHLEETALFKRSVGESSDIVGKEMY 65

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
             +D  G  + LR + TA + R   E          R +  G +FR E+   GR R+F Q
Sbjct: 66  QFEDKGGNDVCLRPEGTAGVVRAFIEAKLDRANVTKRCFYHGSMFRYERPQKGRLREFHQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              +  G  +   DA + +M+++    + IK       + +   +    EK+    D+  
Sbjct: 126 FGCECFGEGSVYEDASIILMVSEIFNRLNIKTTLKINSLGDESSMKSYKEKLVKFLDEND 185

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
           ++        D   +  L  +++L  + + ++  +  K A + ++ +             
Sbjct: 186 DKI-----CEDCKRRKLLNPIRVL--DCKIESCQEIYKNAPVITDSLS------------ 226

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                          ++   +   + E++  +G    + +I + +VRGL+YY    +E I
Sbjct: 227 ---------------DEAQADFAKLQEILTANG---VKFEIDTKLVRGLDYYCKTAFEFI 268

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                           +V GGGRYD LV    G+     GF++G+ R++  L        
Sbjct: 269 SNE--------IGSQSAVAGGGRYDRLVEYLGGRASYGVGFAMGVERIMEILGEAG---- 316

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +     D+ ++         LR    + E+    +K     L+ AD +N  
Sbjct: 317 ----DERDGVYLCALDAANVDFIYNLGSKLRKK-YQVEISY-EAKKLQKHLQNADNKNAK 370

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           + +  G  E     +  K+L    E +  +   E   
Sbjct: 371 IFLCVGENEMKENKIWYKNLETKDEKTINLDELEKEL 407


>gi|296242554|ref|YP_003650041.1| histidyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095138|gb|ADG91089.1| histidyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 427

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 102/459 (22%), Positives = 196/459 (42%), Gaps = 44/459 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
               PRG  D    E  +   ++++ +    + GF+PI TP +EY         +E    
Sbjct: 5   ILNPPRGMRDLTGVEAWVHEYLVNTFKKTAVSTGFEPIVTPTVEYFKLFEAKSGEE--VK 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++  QD  G+ ++LR ++TA + R   +   +   P R Y +   FR E+    R+R+
Sbjct: 63  NSMYVFQDKAGRLLALRPEVTASVVRAYLKGLRSEPKPLRLYYVAQCFRYEEPQHARYRE 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G     AD       +  L+ +G+    +   + +  +  G+++ +G+  +
Sbjct: 123 FWQAGLEVIGDPDVNADLSAAFTASFFLDEIGVG---HEYVVGSVAVHRGLMKGLGIPEE 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +      VL  IDK         + L    +  + GD     +L +  ++ +  F    
Sbjct: 180 AQ----DHVLHLIDKGLVD-----RALEEASKHSSKGDAGLLKDLLNTPLEKLEGF---- 226

Query: 248 LEKSMHELYELV-KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
               +++  EL+        K    L+  +E +R  GY   R++ S ++VRGL YYTG +
Sbjct: 227 ----INDSKELLGGDYERVLKEHERLLEFTEALRSLGY---RVEYSPSLVRGLAYYTGLI 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E       ++          +GGGGRYDGL   + G    +TG ++G+ R+ + L+ ++
Sbjct: 280 FEYKTKTLGVS----------IGGGGRYDGLTMVYGGVFEHSTGLALGLDRIALVLQGVK 329

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                   +G   +  +      +S        L  AG +A ++   S  F   L +A R
Sbjct: 330 ------TPVGGGGVAVILSSKVPVSHGYRVAGALVKAGFKATVY--RSPGFSKPLGHAAR 381

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +    A+I G  E + G   +K+L  G + + +++    
Sbjct: 382 KGYSRAVIIGEKEFNEGSATVKNLETGAQATIKLQELLE 420


>gi|194098171|ref|YP_002001219.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|193933461|gb|ACF29285.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 421

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 98/490 (20%), Positives = 169/490 (34%), Gaps = 92/490 (18%)

Query: 15  FADCPT-------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             D                    D++      YG+  I TP++E +    + + +  D  
Sbjct: 1   MNDLLPVGQKDFKLTAVFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSIGEETDVV 60

Query: 67  NKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D +       R + TA   R V E+      P + + +GP+FR E+   GR+
Sbjct: 61  GKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRERPQKGRY 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q  ++ +G      DAE+  M AD  E +GI+           +      +R  L 
Sbjct: 121 RQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERAAHRAALV 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L +     D+            D   +     +++L  +                   
Sbjct: 181 EYLTRYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PDLQEICNA 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +V +L    +        ++ G                          +   +S +V
Sbjct: 220 APRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENSRLV 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E            K     +V GGGRYDGL+    G+  P+ GF++GI 
Sbjct: 257 RGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIE 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL++ +    S   N        +  M     +  +   Y Q LR  G    M     ++
Sbjct: 309 RLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-MQHSGYQS 363

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+K AD      A+I    E + G + +KD+                      Q T+
Sbjct: 364 LKAQMKKADNSGARFALIVAQDELADGTVTLKDM-----------------NGAHGQQTV 406

Query: 477 PISELVSTVK 486
             ++L  T++
Sbjct: 407 SATDLTDTLQ 416


>gi|94985224|ref|YP_604588.1| histidyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123079905|sp|Q1IZB5|SYH_DEIGD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|94555505|gb|ABF45419.1| histidyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 431

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 111/484 (22%), Positives = 183/484 (37%), Gaps = 75/484 (15%)

Query: 7   LRAELPRGFADCPTK---------EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +  + P+G  D             +      + D+ R + E  G   I TPL E ++ + 
Sbjct: 1   MALQRPKGTQDHLPDGSPKLSRDVQASAFAYVQDTARRVLERAGAQFIATPLFEEAELVR 60

Query: 58  KF-LPDEDRPNKGVFS---LQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIG 112
           +      D   K +F+     D  G    LR + TA + R   +N    +  P + +  G
Sbjct: 61  RGVGGSTDIVRKEMFTVYYFGDHGG--YVLRPEGTAGIVRAYLQNGLKQLPAPLKLWTHG 118

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND----YHIG 168
           P+FR E    GR RQF Q D + +GS+    DAE   +M + +  +G+            
Sbjct: 119 PMFRAENVQKGRLRQFHQVDYEALGSADPLVDAEAIWLMWEVVRELGLTGVRVKLGSIGD 178

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             +R+  +  L         +L++        D  D+     +++L  +   D       
Sbjct: 179 PADREAYNAYLRDCFTPHAARLSD--------DSRDRLTRNPMRILDSKSTGDQ------ 224

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
            A +   Q+  M+ FL                    GE   +    +   +R      + 
Sbjct: 225 -ALIGELQVKPMLDFL--------------------GEAASSHFAAVQAYLRAWNVPFD- 262

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
             I   IVRGL+YY    +E           Q      ++GGGGRYDGL ++  G  VP 
Sbjct: 263 --IDPAIVRGLDYYRRTAWEL--------HHQGVGAKSALGGGGRYDGLSTQLGGPEVPG 312

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G++ GI RL++AL++         E    L+     D + +++        R    R E
Sbjct: 313 IGWAFGIERLLLALEAEGV---TFPEESGPLLFLAALDEEHVARAAGLALEGRRVA-RVE 368

Query: 409 MFLGSSKNFG--NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
                 +     N  K ADRR    A + G+ E  RG+L IK LA G++    +    ++
Sbjct: 369 FAY---RALKPANAFKEADRRRARYAGLLGSDEAERGVLTIKHLASGEQQEVPLAALNTF 425

Query: 467 REAR 470
              R
Sbjct: 426 LAER 429


>gi|332534673|ref|ZP_08410504.1| histidyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035885|gb|EGI72367.1| histidyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 372

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 93/431 (21%), Positives = 164/431 (38%), Gaps = 72/431 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  DC   + ++  ++   +R    ++G+  I  P++E +D   + +
Sbjct: 1   MAKQ----IQAVRGMNDCLPGDTQVWQKVESILRETVASFGYQEIRFPIVESTDLFKRSI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G  ++LR + TA   R   +N        R + +GP+FR+E+
Sbjct: 57  GEVTDIVEKEMYTFADRNGDLLTLRPEGTAVCVRAGNQNGLLYNQEQRLWYMGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGIN 170
              GR+RQF Q  ++  G +    DAE+ ++ A   EA GI                  +
Sbjct: 117 PQKGRYRQFHQFGLETFGIATADIDAEVILLTAQLWEAFGITDHVRLELNSLGSNEARAD 176

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            R  L   LE+     D+            D   +     +++L  +    +       A
Sbjct: 177 YRDALVAYLEQHIDVLDE------------DSKRRMYSNPLRVLDSK--NPDVQAILTDA 222

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
              SE +D                            +       + E +  +G       
Sbjct: 223 PKLSENLDA---------------------------ESKEHFENLCERLDAAG---VSYT 252

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++  +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G
Sbjct: 253 VNEKLVRGLDYYNRTVFEWVT--------DSLGAQGTVCAGGRYDGLVEQLGGKATPAVG 304

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
           F++G+ RL++ L++LE             +        +  +       LR    G+R  
Sbjct: 305 FAMGLERLVLLLQALE---CVGDIRRNADVYLAAMGDKASIQAPEIAAQLRKDVPGLRV- 360

Query: 409 MFLGSSKNFGN 419
           M      NF N
Sbjct: 361 MVHAGGGNFKN 371


>gi|302843589|ref|XP_002953336.1| hypothetical protein VOLCADRAFT_63503 [Volvox carteri f.
           nagariensis]
 gi|300261433|gb|EFJ45646.1| hypothetical protein VOLCADRAFT_63503 [Volvox carteri f.
           nagariensis]
          Length = 430

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 107/462 (23%), Positives = 191/462 (41%), Gaps = 51/462 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D   +++R+RN +      +   +GF+  + P+LE  +   +   +E      +++ 
Sbjct: 5   GTRDFFPEDMRLRNWLFGEFAAVSAAFGFEQFDAPVLESEELFVRKAGEE--ITDQLYNF 62

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D   + ++LR +LT  LAR V +   T+  P + + IG  +R E+   GR R+  Q ++
Sbjct: 63  EDKGQRRVALRPELTPSLARLVLQRGKTLPLPAKWFAIGQCWRYERMTRGRRREHYQWNM 122

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           D VG     A+AE+   +    E VG+   +  I +++RK+L  +L + G+  +      
Sbjct: 123 DIVGIPGVEAEAELLAAVVMFFERVGLSSEEVGIKVSSRKVLQSVLSRYGVPPES----F 178

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDN-SGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             V   +DKLDK   + V+  L        + D    A  +   +D + + L  D     
Sbjct: 179 ARVCVILDKLDKLPREKVEEELAALGVPAPTIDGMLSALSSLTSLDQLGALLGYDS---- 234

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                         + +N+L  + +L    GY  + +    ++VRGL YYTG V+E    
Sbjct: 235 --------------EAYNDLNRLFQLAEGYGY-KDWLVFDPSVVRGLAYYTGIVFEGF-- 277

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                   +     ++ GGGRYD L+  F G N P  GF  G + ++  LK L       
Sbjct: 278 -------DRAGKLRAICGGGRYDRLLGAFGGDNTPMAGFGFGDAVIVELLKELGKLPAPA 330

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL----------- 421
             +  V    +  D+            LR +   A +F                      
Sbjct: 331 HRVDDV---VVPLDASLRPAASGIATRLRRS--AARIFPTPLPPAPLTPVRHPFPNPHHP 385

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           K+A++      ++ G  E  RG + +KDLAK ++    ++  
Sbjct: 386 KHAEKLGASRLVLVGASEWERGKVVVKDLAKFQQEEVAVEEL 427


>gi|229585354|ref|YP_002843856.1| histidyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|259511959|sp|C3MZH9|SYH_SULIA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|228020404|gb|ACP55811.1| histidyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 426

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 106/462 (22%), Positives = 197/462 (42%), Gaps = 40/462 (8%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + E  RG  D    +      +    R++   YG+  I TP++E          +E R  
Sbjct: 3   KFETVRGMKDYIGIDAEKIRYLESIFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRET 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++  +D   + +SLR ++T  +AR   +N  +   P R +  G V+R ++   GR+R+
Sbjct: 63  --MYVFKDKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYRE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G S+  AD E+  ++ +  + + +  +   I INN  I   I++K  +  +
Sbjct: 121 FRQAGIEMIGDSSILADLEVLDLLYNFYDKLNLSND-IIIKINNIGIFRKIMDKYNI--E 177

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D L E ++ L   +K+++      K L  +   D         +   E I+ +     + 
Sbjct: 178 DNLQEHILHLIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEV- 236

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                           +     +E + +  L R     + + KI    VRGL YYTG ++
Sbjct: 237 ----------------SRLDIKSEFLYLFRLSRILSNLNIKFKIDLGFVRGLAYYTGLIF 280

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E +           P V  S+ GGGRYD L+  + G   PA GF+IG+ R ++ +K L+ 
Sbjct: 281 EVL----------HPSVQFSIAGGGRYDKLIELYGGLPSPAIGFAIGVERTLLVIKDLKV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                    PV +  +    D++    M +++LR    +  +           L Y   +
Sbjct: 331 EE-------PVNVIVIGMSEDTIPSMFMVSRILRKEEYKVVINTKDQP-LSKLLPYYASQ 382

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              +AII G  E  + M+ +++L   K++S  ++N E   + 
Sbjct: 383 GFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIEDAIKQ 424


>gi|15835444|ref|NP_297203.1| histidyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285625|ref|ZP_06195019.1| histidyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289635|ref|ZP_06195937.1| histidyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301337021|ref|ZP_07225223.1| histidyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878790|sp|Q9PJJ9|SYH_CHLMU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|7190857|gb|AAF39630.1| histidyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 428

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 98/463 (21%), Positives = 180/463 (38%), Gaps = 63/463 (13%)

Query: 11  LPRGFADCPT---------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
           LP+G  D            +   +   +  +   I   YGFD I TP+ E +++  +   
Sbjct: 5   LPKGVFDIFPYVTNSKNLWRNSFLWKTVEHAAHRICNLYGFDEIRTPVFEKTETFLRVGE 64

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
             D   K V++  D  G+ ++LR + TA + R + ++   +    + Y I P+FR E+  
Sbjct: 65  HSDIVKKEVYTFLDKKGRSLTLRPEGTAAVVRALLDHSADMRKDNKIYYILPMFRYERQQ 124

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+RQ  Q  ++ +G      DAE+  ++ D   AVG+K     +     +      ++
Sbjct: 125 SGRYRQHHQFGLEAIGVRHPLRDAEVLSLLWDFYAAVGLKHMQIQVNFLGGRKTRARYDE 184

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                  K  ++L  L      ++F    +++L  +   D +           EQ   ++
Sbjct: 185 ALREFFRKDLDKLSTLS----QERFHANLLRILDSKEPEDQAFI---------EQAPSIL 231

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            ++                          +L     ++ +        KI+  +VRGL+Y
Sbjct: 232 DYVDD-----------------------QDLNYFDSVLAELKVLGIPYKINPRLVRGLDY 268

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YT  V+EA+      +          +GGGGRYD LV++  G  +PA GF +G+ R+I  
Sbjct: 269 YTDLVFEAVTVVGDHSYA--------LGGGGRYDELVAQSGGPAMPAFGFGVGLERVIQT 320

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L    ++           +  +  D  + +    + + LR  G+  E+   + K     L
Sbjct: 321 LLEQGAALPTAPRR----LRLIPMDESADAFCFSWAKHLRHLGVATEVDW-AHKKPKTAL 375

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLA-----KGKELSRE 459
           K A  +        G  E S     +KD++      G +   E
Sbjct: 376 KDAADQQVGFVCFVGEQELSTKQFIVKDMSLHQSFSGAQQDVE 418


>gi|297562540|ref|YP_003681514.1| histidyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846988|gb|ADH69008.1| histidyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 444

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 120/474 (25%), Positives = 205/474 (43%), Gaps = 46/474 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  +  +R     GF +   +   +  R LD IR  +E++GF  +ETP +E  D L    
Sbjct: 1   MSDQRVVRPTPISGFPEWSPQVRAVEQRWLDHIRAGFESFGFASVETPSVENLDVLMAKG 60

Query: 61  PDEDRPNKGVFSL-------QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
                 ++ V++L       +DD    + L +DLT P ARYVA++F+ + FP + Y++  
Sbjct: 61  E----TSQEVYTLHRLQADAKDDSDARLGLHFDLTVPFARYVAQHFNELAFPFKRYQMQR 116

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GRFR+F QCD+D +   +     +  +         G+    + + +NNRK
Sbjct: 117 VWRGERPQEGRFREFTQCDIDVINVDSVPLHFDAELPRIVHRVLSGLDLPAWTLNVNNRK 176

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L G  E +G+       + + V+RA+DKL K G  GV+ +L                LT
Sbjct: 177 VLQGFYEGLGIK------DPIAVIRAVDKLHKIGDDGVRQILLAD------------GLT 218

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            EQ D  ++   +    +         G  +         +   L   +      +    
Sbjct: 219 DEQADACLALARVRGAGTGVAERVRGLGVSSELLDEGLEELSFVLEDLADLPEGSVVADL 278

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           +I RGL+YYTG VYEA               +GS+  GGRYD L  +F  + +P  G SI
Sbjct: 279 SIARGLDYYTGTVYEASF--------DDDPGYGSICAGGRYDDLAGQFIRRRLPGVGISI 330

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G++R+   L +             V++      ++   +  +  ++LR  G   E+F  +
Sbjct: 331 GLTRIFAKLVAEGRIEEGRACPTDVMVVV--PGAERRREALLTGELLRGRGFNTEVFHST 388

Query: 414 SKNFGNQLKYADRRNCPLAII--QGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +K  G Q++YA ++  P       G      G  ++KD+  G++   +      
Sbjct: 389 AK-VGKQIQYAAKKGIPFVWFPPFGED----GGHEVKDMGSGEQGPADPATWAP 437


>gi|332822162|ref|XP_001137980.2| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Pan troglodytes]
          Length = 449

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 100/434 (23%), Positives = 176/434 (40%), Gaps = 50/434 (11%)

Query: 45  IETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
           ++TP       +GK+  D    +K ++ L+D  G+ +SLRYDLT P ARY+A N  T + 
Sbjct: 56  LKTP---KETLMGKYGED----SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIK 108

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
                +   +  N                            +   +         ++  D
Sbjct: 109 RYHIAKDFDIAGNFDP----------------------MIPDAECLKIMCEILSSLQIGD 146

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
           + + +N+R+ILDG+    G+       +   +  ++DKLDK   + VK            
Sbjct: 147 FLVKVNDRRILDGMFAICGVSDS----KFRTICSSVDKLDKVSWEEVK-----------N 191

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRK 281
           +      L  E  D +  ++      S+ E       +       +G  +L ++ E +  
Sbjct: 192 EMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTL 251

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VS 339
            G   ++I    ++ RGL+YYTG +YEA+L        ++P+  GSV  GGRYDGL  + 
Sbjct: 252 FGI-DDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMF 310

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             KG+ VP  G SIG+ R+   ++    +           +         L +       
Sbjct: 311 DPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKLLEERLKLVSE 370

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L  AGI+AE+    +    NQL+Y +    PL  I G  E   G+++++ +   +E+   
Sbjct: 371 LWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVR 430

Query: 460 IKNNESWREARVAQ 473
            ++     + R  Q
Sbjct: 431 REDLVEEIKRRTGQ 444


>gi|255513318|gb|EET89584.1| histidyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 423

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 130/458 (28%), Positives = 210/458 (45%), Gaps = 42/458 (9%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPNKGV 70
           PRG  D    E   +   +  I +++  +GF  I TP +E    L GK    ED   K +
Sbjct: 7   PRGVRDLLPNEALFKAETVGKIESVFRAFGFLTISTPKIESLKILKGKSAIGED--EKLI 64

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L+    + + LRYD T  LARY   + + +  P + Y IG  +R ++    R+R+F Q
Sbjct: 65  YELK---EEELGLRYDQTVSLARYFIMH-NNLPLPFKRYAIGEAWRMDEPQHLRYREFTQ 120

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
            DVD +G      DAE+   +A  L+A+ IK   Y + +N+R +++ +L+  G+  D   
Sbjct: 121 ADVDIIGGERSLCDAEVVATIASALDALDIK---YEVLVNSRVLMEDMLDAFGVPED--- 174

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            + + V+R IDKLDK G  GV  +L +            A + SEQ   +V+F+      
Sbjct: 175 -KHIEVMRIIDKLDKAGSDGVNQMLEK------------AGMDSEQRLKVVNFVGAKGTN 221

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              E  +  K    G    +EL  + ELV+K       +K+  +IVRG++YYTG V+E  
Sbjct: 222 --EEKLKYAKDFAKGSGACDELGNMIELVKKY-PIKGELKVDFSIVRGIDYYTGMVFEIR 278

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                           S+ GGGRYD L+  + G+++PA G +IG+ R++  LK      +
Sbjct: 279 AAEEGAP-------IQSLCGGGRYDKLIENYGGKSIPAVGGTIGVDRVLDLLK-----FS 326

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
             K              ++          LR  GI  E+ L + +N  NQL Y    N  
Sbjct: 327 YSKRYTFAKAFVAYIRKENYDYALSVANKLRENGINTEINL-ADRNISNQLSYISSMNIE 385

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            A+I G  E+  G ++++++  G E    +       +
Sbjct: 386 YAVIVGDIEQKEGKVKLRNMVSGDEEVIGLDVLVQKLK 423


>gi|317163895|gb|ADV07436.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 421

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 97/490 (19%), Positives = 169/490 (34%), Gaps = 92/490 (18%)

Query: 15  FADCPT-------KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             D                    D++      YG+  I TP++E +    + + +  D  
Sbjct: 1   MNDLLPVGQKDFKLTAVFWQAFEDTVNRWTRAYGYQQIRTPIVEQTGLFVRSIGEETDVV 60

Query: 67  NKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K +++  D +       R + TA   R V E+      P + + +GP+FR E+   GR+
Sbjct: 61  GKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRERPQKGRY 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q  ++ +G      DAE+  M AD  E +GI+           +      +R  L 
Sbjct: 121 RQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERAAHRAALV 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L +     D+            D   +     +++L  +                   
Sbjct: 181 EYLTRYEAQLDE------------DSKRRLKTNPLRVLDTKN---------PDLQEICNA 219

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +V +L    +        ++ G                          +   +S +V
Sbjct: 220 APRLVDYLGEASQNHYARFKAMLDGL-----------------------GIQYIENSRLV 256

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E            K     +V GGGRY+GL+    G+  P+ GF++GI 
Sbjct: 257 RGLDYYNQTVFEWTT--------DKLGAQATVCGGGRYNGLIEELGGKPAPSIGFAMGIE 308

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL++ +    S   N        +  M     +  +   Y Q LR  G    M     ++
Sbjct: 309 RLLLLVSEYGSLEVNAAPD----VYAMHQGEGADLQVMKYAQALRAQGFNV-MQHSGYQS 363

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q+K AD      A+I    E + G + +KD+                      Q T+
Sbjct: 364 LKAQMKKADNSGARFALIVAQDELADGTVTLKDM-----------------NGAHGQQTV 406

Query: 477 PISELVSTVK 486
             ++L  T++
Sbjct: 407 SATDLTDTLQ 416


>gi|303284585|ref|XP_003061583.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456913|gb|EEH54213.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 731

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 99/485 (20%), Positives = 183/485 (37%), Gaps = 90/485 (18%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D   +++R++  + D  R I +  GF+  + P+LE  +   +   +E     
Sbjct: 319 LEPPSGTRDFYPEDMRLQRWLFDKFRAIGDACGFEEYDAPVLERQELYKRKAGEE--ITS 376

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++  D +G  ++LR ++T  LAR V     + V P + Y +   +R E    GR R+ 
Sbjct: 377 QMYAFVDQEGHEVTLRPEMTPSLARMVLGRAQSHVLPLKWYSVPQCWRFETTQRGRKREH 436

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q ++D VG  +  A+ E+   +     ++GI   D  I IN+RK++  +L+ +G+  DD
Sbjct: 437 YQWNMDVVGCPSINAEVELLYAICAFFTSIGITSKDIGIKINSRKVMASVLKAMGVS-DD 495

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 +V+   DK+     +               +      L +     +VS L    
Sbjct: 496 AFAPVCVVMDKFDKIGAAATEE--------------ELVSTQGLDAATAKKIVSCLQCAT 541

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +      + G      G +EL  + EL    G+  + +   +++VRGL YYTG V+E
Sbjct: 542 VDDL----TALCGDGVDTGGVDELKKLFELADAYGFG-DWLVFDASVVRGLAYYTGVVFE 596

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                       +     ++ GGGRYD L+S +                           
Sbjct: 597 GF---------DRAGELRAICGGGRYDRLLSLYG-------------------------- 621

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                                         ++R  G + ++ L   K       YA+R  
Sbjct: 622 ---------------------AGAAMKTASLMRAGGAKVDLLLEPKKKVTATFDYANRVG 660

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
               +     E  +G +++KDL  G+++   +K           Q+ + + +L   V  +
Sbjct: 661 ARYIVFVAPAEWEKGEVRVKDLRLGEDVDDALK-----------QVDVAVKDL-GRVHDV 708

Query: 489 LQENK 493
           L    
Sbjct: 709 LDAWA 713


>gi|159041236|ref|YP_001540488.1| histidyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920071|gb|ABW01498.1| histidyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 427

 Score =  196 bits (498), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 118/453 (26%), Positives = 206/453 (45%), Gaps = 42/453 (9%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D    +      +   +  + E++G+  IETP LE+ + L     +E     
Sbjct: 13  LQPPRGMNDWTPDKYYSLITVASKLSRVAESFGYSAIETPALEHFEVLKAKAGEE--VIN 70

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++ L+D  G+ + LR+D+T P+AR V         P R Y +  V+R ++   GRFR+F
Sbjct: 71  EIYYLKDKAGRELGLRFDMTVPVAR-VLSYRRDFPRPIRLYYVSKVWRYDEPQFGRFREF 129

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V++VGS    +DAE+  +   +LE+V +      + +++R+I+D +L+K+ +    
Sbjct: 130 YQFGVEHVGSPTVQSDAEVLALAVKSLESVNL--PQLTVKVSDRRIMDQLLDKMSISTAR 187

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +      VLR +DK  K     +  LL     D +   +  A             ++   
Sbjct: 188 ES-----VLRILDKRGKVTDDELIKLLIREGIDKTKAESLVA-----IASTRTPIVNSTG 237

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           E         ++    G+   N +  +   +   G   +R+ +  +IVRGL+YYTG V+E
Sbjct: 238 E---------LRELGVGDDLINYVESLVNALTDYGVL-DRVYLDLSIVRGLDYYTGFVFE 287

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                  +          +VGGGGRYD L+  + G++VPA GF+IGI R+++AL   +  
Sbjct: 288 LYTDKIKL----------AVGGGGRYDELLKVYSGEDVPAVGFAIGIERVMLALSEEQGG 337

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                 + PV       +S          + LR  G+R  + +G   +  + L+YA R  
Sbjct: 338 ------VPPVDYYVYPMESSYYGMGVRIAEKLREIGLRVIVDVG-KPSLRSALEYAARIK 390

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
               II G  E  +G+++++DL    E    + 
Sbjct: 391 ARKFIIIGRREVEKGVVRVRDLETWSEEDVPLD 423


>gi|159037433|ref|YP_001536686.1| histidyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157916268|gb|ABV97695.1| Histidine--tRNA ligase [Salinispora arenicola CNS-205]
          Length = 440

 Score =  196 bits (498), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 134/473 (28%), Positives = 189/473 (39%), Gaps = 51/473 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T +      GF +    +  I   +LD IR+ +E YGF P+ET  +E  D L +  
Sbjct: 1   MSKPTPI-----SGFPEWTPDQRMIEQYVLDRIRSTFERYGFAPLETRAVEPLDQLLRKG 55

Query: 61  PDEDRPNKGVFSL----QDDDG----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
                 +K V+ L     D DG      + L +DLT P ARYV EN   + FP R Y+I 
Sbjct: 56  E----TSKEVYLLRRLQADVDGPAGDDALGLHFDLTVPFARYVLENAGKLQFPFRRYQIQ 111

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GR+R+F+Q D+D V         E  M +        +      I +NNR
Sbjct: 112 KVWRGERPQEGRYREFLQADIDIVDRDTLAPHHEAEMPLVIGDALRSLPIPPVRIQVNNR 171

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           KI +G    +GL   +        LRA+DKLDK G   V  LL                L
Sbjct: 172 KICEGFYRGLGLTDPEAA------LRAVDKLDKIGPVRVAELLIAAAGATEAQAKAVLAL 225

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
                                 +  L       ++G  ELV + +    + +        
Sbjct: 226 AEISAPD---------ASFADAVNALGVSHPLLDEGVAELVQVMQ--TAAEHAPGLCVAD 274

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
             I RGL+YYTG VYE  L             FGS+  GGRYD L S       P  G S
Sbjct: 275 LRIARGLDYYTGTVYETQLVGYER--------FGSICSGGRYDNLASAGA-VAFPGVGIS 325

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG++RL+  L    +    I    P  +          +      + LR  GI  E+   
Sbjct: 326 IGVTRLLGLL--FGAGALTISRQVPTCVVVAVASEAQRAVSNRVAETLRARGISTEVAPS 383

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           ++K FG Q++YA+RR  P     G  E       +KD+  G ++    +  E 
Sbjct: 384 AAK-FGKQIRYAERRGIPYVWFPGADEDE-----VKDIRTGAQVPARAEVWEP 430


>gi|145594362|ref|YP_001158659.1| histidyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145303699|gb|ABP54281.1| Histidine--tRNA ligase [Salinispora tropica CNB-440]
          Length = 442

 Score =  196 bits (497), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 138/471 (29%), Positives = 198/471 (42%), Gaps = 53/471 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T +      GF +    +  I   +LD IR  +E YGF P+ET  +E  D L +  
Sbjct: 1   MSKPTPI-----SGFPEWTPAQRMIEQYVLDRIRGTFERYGFAPLETRAVEPLDQLLRKG 55

Query: 61  PDEDRPNKGVFSL----QDDDG----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
                 +K V+ L     D DG      + L +DLT P ARYV EN   + FP R Y+I 
Sbjct: 56  E----TSKEVYLLRRLQADPDGPTGDDALGLHFDLTVPFARYVLENAGKLQFPFRRYQIQ 111

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GR+R+F+Q D+D V         E  M +        +      I +NNR
Sbjct: 112 KVWRGERPQEGRYREFLQADIDIVDRDTLAPHHEAEMPLVIGDALRSLPIPPVRIQVNNR 171

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           KI +G    +GL   +        LRA+DK+DK G   V  LL              A  
Sbjct: 172 KICEGFYRGVGLTDPEAA------LRAVDKIDKIGPARVADLLA-----------ATAGA 214

Query: 233 TSEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           T  Q   +++   I    +     +  L       ++G  ELV + +    + +      
Sbjct: 215 TEAQAKAVLALAEISAPDASFADAVNALGVSHPLLDEGLAELVQVMQ--TAAEHAPGLCV 272

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
               I RGL+YYTG VYE  L             FGS+  GGRYD L S       P  G
Sbjct: 273 ADLRIARGLDYYTGTVYETQLVGYER--------FGSICSGGRYDSLASAGA-VAFPGVG 323

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG++RL+  L    +    I    P  +          +      + LR  GI  E+ 
Sbjct: 324 ISIGVTRLLGLL--FGAGALTISRPVPTCVVVAVTSEAQRAVSNRVAEALRARGICTEVA 381

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             ++K FG Q++YA+RR  P     GT E   G  ++KD+  G ++S   +
Sbjct: 382 PSAAK-FGKQIRYAERRGIPYVWFPGTDE---GEGEVKDIRTGAQVSARAE 428


>gi|39938613|ref|NP_950379.1| histidyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|46396583|sp|P60918|SYH_ONYPE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|39721722|dbj|BAD04212.1| histidyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 422

 Score =  196 bits (497), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 93/463 (20%), Positives = 172/463 (37%), Gaps = 49/463 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
               +G  D  + ++    ++ + IR ++  Y    I TP++EY     +     +  +K
Sbjct: 2   FSKIKGTYDLMSDKMVCWQKVENHIRTLFAKYHLQEIRTPIIEYRGVFDRAAQHSEMVSK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRFRQ 127
             ++  D   ++I+LR + TA + R   EN           +  GP FR E+   GR+RQ
Sbjct: 62  ETYTFADKKERFITLRPEGTAGVIRSYVENKLDKTSQLHKFFYYGPCFRYERPQKGRYRQ 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK-ILDGILEKIGLHG 186
           F Q  V+ +G S    D E+  +  +T++++GI      I     K   +  L+    + 
Sbjct: 122 FHQVGVEILGQSNPFLDVEVIALAYETIKSLGICDITVKINSLGCKTTYNNYLQVFKNYL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +   +       ++F    +++   +   +             +Q   +   L  
Sbjct: 182 QAHYQQLCPLC-----QERFEKNILRIWDCKNCNNEPF---------LKQAPRIFDHLVE 227

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D +    ++ E +K      +  ++L                       VRGL+YYT  V
Sbjct: 228 DAKVRFLQVLEGLKQMNVNFELCHDL-----------------------VRGLDYYTHSV 264

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +                 +GGGG YD LV+ F G   P  GF++G+ RL+  L +  
Sbjct: 265 FEIVYNNE-------QGHQAVLGGGGCYDNLVTLFGGNPSPGIGFALGMERLMSILATHS 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               NI       I           +       LR  G  A++      +F   LK A +
Sbjct: 318 FCNKNILPSLDAFILVSVPQ--FFYQGLALATTLRHQGFSADLNYQF-LSFSKSLKQALK 374

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +     +I G  E     + IK+    ++ +   K+  S+ + 
Sbjct: 375 QQPLYLLILGPKEFDNNQITIKNTDTQQQTTILQKDVVSYFQN 417


>gi|157825548|ref|YP_001493268.1| histidyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166228604|sp|A8GMY5|SYH_RICAH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|157799506|gb|ABV74760.1| histidyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 415

 Score =  196 bits (497), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 83/467 (17%), Positives = 171/467 (36%), Gaps = 63/467 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    + ++ + I+   R++   YG+  + TP+LEY+    + + +  D  
Sbjct: 4   KLQPLRGIKDLLPDDYKVHDYIISKARDVGVLYGYKQMSTPILEYTKVFNRSMGESSDVI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D   + ++LR + TA + R    N      P + +  GPVFR ++   GR R
Sbjct: 64  SKEIYSFLDKSNESVALRPEFTAGIIRSFISNGLQHKLPLKLFSTGPVFRYDRPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q + + +G+     DAE   +  D L+A+ I+++     +      +R      L +
Sbjct: 124 QFHQLNYEYIGAKGAITDAETLKLAIDILKALAIEQDTLLELNSLGCSESRSAYKQKLVE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        +   +     +++L  +   D                 I+ 
Sbjct: 184 YLSDFKDQLSE--------ESKIRMIKNPMRILDSKSEIDQK---------IVAYAPILS 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            + + +                  ++ F+EL+   +++        +  I+  +VRGL+Y
Sbjct: 227 EYYTDES-----------------KEYFDELIKYLDIL------GVKYSINPRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E            K     ++  GGRYDGL       +             I  
Sbjct: 264 YCHTAFEFTTN--------KLGSQSTILAGGRYDGLSRIMGNNDDVPAIGFAAGIERIAL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++  + S           +  +    ++++        LR   I   +          ++
Sbjct: 316 MREYDISEVK-------PVFVLPIGDNNITYALEIVDKLRAQNIATIVEPLG--KIAKRM 366

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +     N    I  G  E+    +++KDL K +E   +        +
Sbjct: 367 QRVLNENAKFIIFIGDEEQENNSIKLKDLEKQEEYIVDFAKAFELLK 413


>gi|311114717|ref|YP_003985938.1| histidine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946211|gb|ADP38915.1| histidine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 466

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 136/486 (27%), Positives = 217/486 (44%), Gaps = 45/486 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
               GF +    E  +  R++D++R ++E  GF  IET  +E   SL K        +K 
Sbjct: 5   SSISGFPEWLPSERAVEQRVMDTLREVFELNGFIGIETRAVEQGSSLLKKGE----TSKE 60

Query: 70  VF---SLQDDD-------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           ++    LQ+            I L +DLT PL+RYV E+   + FP + +++  V+R E+
Sbjct: 61  IYLLSRLQEVGHESDTPVENRIGLHFDLTVPLSRYVVEHTGDLAFPFKRWQMQKVWRGER 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEM--CMMMADTLEAVGIKR-NDYHIGINNRKILD 176
              GRFR+F+Q D+D VG+    +  E+   ++M + LE +         +  NNRK+ +
Sbjct: 121 PQEGRFREFVQADIDVVGNGDLPSHYEVELPLVMVEALERLREFGLPKATVHANNRKLSE 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT---DNSGDFTKGANLT 233
           G    IGL   +       VLR IDKLDK G + V  LL +        +    + A LT
Sbjct: 181 GFYRGIGLSDIE------GVLREIDKLDKIGAEEVAKLLVKECGATDSQAAACLELAELT 234

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           +E  D + S      +K      E  +      +G   L +I +    +      +    
Sbjct: 235 AETGDELKSRFDELCDKHDISRSEDNESYTLASQGVETLAMIVD--DAAKIRPGAVVADL 292

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            I RGL+YYTG VYE  L              GS+  GGRYD LVS+   +  P  G SI
Sbjct: 293 KIARGLDYYTGSVYETFL--------DGAESLGSICSGGRYDNLVSQ-GNKKYPGVGLSI 343

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+SRL+  +     +T +      VL+   + +    S      + LR  GI A++   +
Sbjct: 344 GLSRLLSYMLHTAGATVSRVSPAAVLVAVWNEED--RSACNEIARKLRARGIAADVSPSA 401

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTG-ERSRGMLQIKDLAKGKELSREIKNNESWREARV- 471
           +K  G Q+KYAD+   P         +      ++K++  G+++S    +  SW+   V 
Sbjct: 402 AK-LGKQIKYADKLGIPYVWFPADSADSESNHDEVKNIITGEQVS---ADATSWQPDTVY 457

Query: 472 AQITIP 477
           A+ T+ 
Sbjct: 458 ARQTVS 463


>gi|219683676|ref|YP_002470059.1| histidyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|254782320|sp|B8DU04|SYH_BIFA0 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|219621326|gb|ACL29483.1| histidyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|289178446|gb|ADC85692.1| Histidyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 466

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 133/494 (26%), Positives = 214/494 (43%), Gaps = 47/494 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +      GF +    E  +  R++D++R ++E  GF  IET  +E   SL K  
Sbjct: 1   MAKGASI-----SGFPEWLPAERVVEQRVIDTLREVFELNGFIGIETRAVEQGSSLLKKG 55

Query: 61  PDEDRPNKGVF---SLQDDDGQW-------ISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
                 +K ++    LQ+   +        + L +DLT PL+RYV E+   + FP + ++
Sbjct: 56  E----TSKEIYLLSRLQEVGHESDIPVEQRLGLHFDLTVPLSRYVVEHSGALPFPFKRWQ 111

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM--CMMMADTLEAVGIKR-NDYHI 167
           I  V+R E+   GRFR+F+Q D+D VG     +  E+   ++M + LE +         +
Sbjct: 112 IQKVWRGERPQEGRFREFVQADIDVVGDGTLPSHYEVELPLVMVNALERLREFGLPKATV 171

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
             NNRK+ +G    +GL   +       VLR IDKLDK G Q V  LL E          
Sbjct: 172 HANNRKLSEGFYRGLGLTDIE------GVLREIDKLDKIGPQAVTDLLVETCGATEAQAN 225

Query: 228 KGANLTSEQIDIMVSFL-SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
               L     +     +   +    +H +          ++G + L +I +         
Sbjct: 226 ACLELAQVTAEDGQELIEKFNGLCEIHHIPFDGDEYAMAKEGLDTLSMIID--EARRIRP 283

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             +     I RGL+YYTG VYE  L              GS+  GGRYD L ++   +  
Sbjct: 284 GSVMADLKIARGLDYYTGSVYETFLEGAS--------DLGSICSGGRYDNLATQ-GNRKY 334

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG+SRL+  +     +T +      VL+     D ++          LR+ GI 
Sbjct: 335 PGVGLSIGLSRLVSYMLHRAGATASRMSPACVLVAV--WDEENRGDSNAIANTLRSRGIA 392

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A++   ++K  G Q+KYAD+   P          + G  ++K++  G +      + +SW
Sbjct: 393 ADVAPTAAK-LGKQIKYADKLGIPYVWFPNENPENDGSDEVKNIITGDQ---RPADAQSW 448

Query: 467 REARV-AQITIPIS 479
           +   V AQ T+ I+
Sbjct: 449 QPDTVYAQQTVSIN 462


>gi|21672557|ref|NP_660624.1| histidyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009352|sp|Q8K9P3|SYH_BUCAP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|21623183|gb|AAM67835.1| histidyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 428

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 104/499 (20%), Positives = 188/499 (37%), Gaps = 76/499 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    +    RG  D   +E++I  +I + I+ I  +Y ++ I  P+LE +    + +
Sbjct: 1   MNK----KINSVRGMHDYLPEELKIWKKIENIIQKILTSYCYEEIRLPILEKTKIFQRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K ++S +D  G  ++LR + T    R + EN        R + +GP+FR E+
Sbjct: 57  GNITDVVEKEMYSFKDKKGNSLTLRPEGTVGCVRAIIENNLLFQKKQRFWYLGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q  V+  G +    D E+ ++++   + +GI   + HI +    I   + 
Sbjct: 117 PQKGRYRQFYQLGVEVFGLNTPDIDLEIILLISRLWKCLGI---NLHIKLEINSIGSKLD 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       E+   +   D   +      ++L  +   D      K A L    I+ 
Sbjct: 174 RIKYQKELVFFLEKYKNILDEDSKKRLYTNPFRILDSK--NDMMQKILKKAPLLKNYINT 231

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                                         N    +  ++   G    +   +  +VRGL
Sbjct: 232 ---------------------------SAINHFNSLCNMMDSYG---IKYIHNQNLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E  +         +     ++  GGRYD LV    G    A GF+IGI RL+
Sbjct: 262 DYYNSTVFEWKI--------DQIGSQNTICAGGRYDSLVQELGGNKTSAIGFAIGIERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSK 415
           + +KSL   +   ++   + I  +     +       ++ +R       I  +       
Sbjct: 314 LLIKSLNIISCKEED---INIYIIFIGELNKIYAISLSEEIRNIYPKLKIFVDFMTC--- 367

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   ++K A      +AI+ G  E  +    +KDL +G+E                    
Sbjct: 368 SLSKKIKNAVDSLAHIAILIGANEIKKNCFLLKDLKRGRE------------------YF 409

Query: 476 IPISELVSTVKKILQENKE 494
              SEL+  +KKI  +   
Sbjct: 410 FSKSELILKIKKIFYKQGN 428


>gi|330835872|ref|YP_004410600.1| histidyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329568011|gb|AEB96116.1| histidyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 431

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 101/456 (22%), Positives = 185/456 (40%), Gaps = 40/456 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  RG  D    E +   ++    R + E  G+    TP++E  +       +E R  K
Sbjct: 4   YEPLRGMQDYYADEAQKIRKVETIFREVVEKAGYSEAITPVVEEFELFSVKGGEELR--K 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D   + ++LR ++T  + R    +      P R + +G V+R ++   GR+R+F
Sbjct: 62  TMYVFKDKGDREVALRPEITPSIVRLYLNSLQHFPKPLRIFYVGRVYRYDEPQLGRYREF 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G+ +  A+ EM  ++ D    +G+K ++    INN  I   I + I +  + 
Sbjct: 122 RQAGVEVLGTESILAELEMFHLLNDFYRKIGLK-DNVEFKINNIGIYRKIFDYIKIDDNL 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +                   + V  LL +G+ +      +   + + +I  ++  L+ + 
Sbjct: 181 Q-------------------EHVLHLLDKGKINEFYSTLERIPIQNSKIMDLLEILTKNG 221

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +    E        I   +   E+  IS +            I  + VRGL YYTG ++E
Sbjct: 222 KSVKIEELIAYIDKIDIPELKIEIEKISLISDVLSSLGINYLIDLSFVRGLAYYTGPIFE 281

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                       K  +  S+ GGGRYD LV  + G   PA GF+IGI R + AL+++   
Sbjct: 282 VT----------KKGLPFSIAGGGRYDSLVEIYGGSKTPAIGFAIGIERTVHALENILLR 331

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADRR 427
              +      LI  +  D+ ++ K      +LR  G    +      +    +  YAD +
Sbjct: 332 KEPVH-----LIAVITLDNLAIKKALEIASILRENGYVTTLN-NKDLSLSKLISLYAD-Q 384

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
                II G  E     + +++L   ++    I   
Sbjct: 385 GYTHVIIIGKKELENEKVTVRNLKTREQRLVNISEL 420


>gi|171912994|ref|ZP_02928464.1| histidyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 429

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 99/470 (21%), Positives = 182/470 (38%), Gaps = 59/470 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +  +GF D   ++  +RN I    R++   +GF   E P LE +D L K     D   +
Sbjct: 4   FKTVKGFRDFFPEDCALRNSIFKRWRSVASRHGFVEYEGPTLESTDLLKKKSG--DEITQ 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F       + +S+R ++T  LAR  A        P + ++IGP +R E+   GR R+F
Sbjct: 62  QLFCFTTKGEEEVSMRPEVTPTLARMAAARQRDFPKPLKWFQIGPCYRYERQQRGRLREF 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q +VD +G ++  ADAE+  +  ++L +  ++  D+ I +++R++         L+   
Sbjct: 122 YQFNVDILGEASPAADAELVALAIESLRSFALEPGDFIIRLSDRRLWTEFQSTYELNE-- 179

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              +    L+ IDK+++                            +E  +  +  L + L
Sbjct: 180 --TQSGEFLQIIDKMERTP--------------------------AEVTNTKLEALGMSL 211

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           EK    +  +        +    L                +KI   IVRGL YYTG V+E
Sbjct: 212 EKVQAFISSISADHPIFAELRENLEARDLW--------QYVKIDPGIVRGLAYYTGTVFE 263

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV------AL 362
           A                 ++ GGGRYD LV       V  +     +  +++        
Sbjct: 264 AF---------DVKHGLRAIAGGGRYDNLVGHLSDGAVQMSACGFAMGDVVLGELIKATP 314

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            + +    ++ +   V +  +  D     +       LRTAG R +  L + +    Q +
Sbjct: 315 AAQQQMKRDMDQSVSVDVYVLLADETRRREALQTVTQLRTAGWRVDYSL-TPQKVNKQFQ 373

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+      A I G       ++ +K+LA   ++     N       +++
Sbjct: 374 AAENSKARFAAIIGG---EYPIVVLKNLATRDQMEIPAANLAQKIGEQMS 420


>gi|163840732|ref|YP_001625137.1| histidyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162954208|gb|ABY23723.1| histidyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 480

 Score =  195 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 136/480 (28%), Positives = 210/480 (43%), Gaps = 48/480 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K  L      GF +   +E  I   + D++R ++E +GF  IET  +E    L +  
Sbjct: 33  MARKASL-----SGFPELLPQERMIEQHVSDTLRKVFELHGFASIETRAVETVAQLLRKG 87

Query: 61  PDEDRPNKGVF---SLQDDDGQW---ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
                 +K V+    LQ +DG     ++L +DLT P +RYV EN   + FP R Y+I   
Sbjct: 88  E----IDKEVYAVSRLQAEDGAQDSGLALHFDLTVPFSRYVVENAGYLAFPFRRYQIQKA 143

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           +R E+   GR R+F+Q D D VG    ++  ++ +++        +   ++ + +NNRK+
Sbjct: 144 WRGERPQEGRQREFLQADFDVVGDGELSSRYDVEIVLVAAAALSALPILEFKLRVNNRKL 203

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
            +G    +GL       +   VLR+IDKL+K G + V  LL     D  G   + A    
Sbjct: 204 AEGFYRGLGLA------DTTGVLRSIDKLEKIGAEAVATLL----RDELGATEEQARAAL 253

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E   I    LS      + ++  L       E+G  EL  +             +    +
Sbjct: 254 ELAQIRTEDLSF-----VDKVRALGVQDDLLEEGLTELTEVLT--AAMKQAPGTVVADLS 306

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           I RGL+YYTG V E +L              GS+  GGRYD L  +      P  G SIG
Sbjct: 307 IARGLDYYTGTVIETVLVG--------HEALGSICSGGRYDALARKGNRT-FPGVGLSIG 357

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           +SRL+  L S E  T +      V I          S  Q     LR  GI  E+ + ++
Sbjct: 358 VSRLVARLLSQEFVTASRSVPTAVYIALNSDHD--WSAAQEVAAGLRARGIATEVAV-AA 414

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + FG Q+K+ADRR  P     G      G  ++KD+  G++++ +  +          QI
Sbjct: 415 EKFGKQIKFADRRGIPFVWFIGED----GSHEVKDIRSGEQVAADPLSWSPPSADLTVQI 470


>gi|326329821|ref|ZP_08196141.1| histidine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325952407|gb|EGD44427.1| histidine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 449

 Score =  195 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 130/490 (26%), Positives = 216/490 (44%), Gaps = 54/490 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T L      GF +    +  +   +++++ + +E +GF  IET  +E  D L +  
Sbjct: 1   MNKPTPL-----SGFPEFLPSQRVVEREVIETLSHTFELHGFGNIETRAVEPMDQLLRKG 55

Query: 61  PDEDRPNKGVFSLQ-----DDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
                 +K V+ L+     D+   + + L +DLT P ARYV EN   + FP R Y+I  V
Sbjct: 56  D----TSKEVYVLKRLQEQDESRDKGMGLHFDLTVPFARYVLENAGKLEFPFRRYQIQKV 111

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSS--AETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           +R E+   GRFR+F Q D+D VG        D E+  +M + L  +      + + +NNR
Sbjct: 112 WRGERPQEGRFREFAQADIDIVGRDTLPFHHDVEVARVMLEALGKLTFLPG-FTLQVNNR 170

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K++ G    +G    ++       +R IDKLDK   + V  LL              A L
Sbjct: 171 KLIQGFYAGLGAPDVEE------TMRLIDKLDKMPAEEVGKLL-----------VSEAGL 213

Query: 233 TSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           + EQ    +    ++   +  + ++  L   +   ++G +EL  +          S R+ 
Sbjct: 214 SDEQAAKCLELATITATDDSFVEKVRGLGVESELLDEGLSELATLINATAPLNTESVRVV 273

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              +I RGL+YYTG V+E  L              GS+  GGRYD L S  +    P  G
Sbjct: 274 ADLSIARGLDYYTGTVFETRLDGYE--------SLGSICSGGRYDALASDGRTT-YPGVG 324

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            S+G+SR++V L        + K    VL+     D +S +      Q LR   +  E+ 
Sbjct: 325 ISLGVSRVLVPLVQKGVLDGDRKVPSTVLVAIA--DEESRASADEAAQALRAHNVACEVS 382

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             ++K FG Q+++A+RR  P  +       + G  +IKD+  G ++  +        E+ 
Sbjct: 383 PNAAK-FGKQIRFAERRGIPYVLF-----ATEGGYEIKDIRTGDQVPADPATWTPQNESD 436

Query: 471 VAQITIPISE 480
           +    +  +E
Sbjct: 437 LKPQVVANTE 446


>gi|283458008|ref|YP_003362615.1| histidyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134030|dbj|BAI64795.1| histidyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 469

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 125/481 (25%), Positives = 214/481 (44%), Gaps = 41/481 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K  L      GF +    E  + N +LD++R  +E +GF PIET  +E  + L +  
Sbjct: 17  MARKASL-----SGFPEYLPAERLVENHVLDTLRETFELHGFSPIETRSVETIEQLLRKG 71

Query: 61  PDEDRPNKGVFSL----QD---DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
                 +K V+++    +D      + ++L +DLT P ARYV EN   + FP   Y+I  
Sbjct: 72  E----IDKEVYAISRLQEDEAAKAKEKLALHFDLTVPFARYVVENAGYLNFPFSRYQIQK 127

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GR R+F Q D+D VG        ++ + +        +   ++ + +NNRK
Sbjct: 128 VWRGERPQEGRAREFTQADIDVVGDGELPFRYDVTLALVVVDALSKLPIPEFKLRVNNRK 187

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +G      L +   VLR+IDKL+K G + V   L      ++          
Sbjct: 188 LAEGFYLGLG------LTDTAAVLRSIDKLEKIGAERVAEELQAEAGASADAAAAAL--- 238

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
             ++  + +  +  +E+      +        ++G  EL  + E    S     ++    
Sbjct: 239 --ELAQIRTEDASFVEQVRVLAAKYSVEHELLDQGLAELAEVIE--EASRRAPGKVLADL 294

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           +I RGL+YYTG VYE +L              GS+  GGRY+ L S  K    P  G SI
Sbjct: 295 SIARGLDYYTGTVYETVLVG--------HESLGSICSGGRYESLASNGKKT-YPGVGLSI 345

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G++R++  + S   +  + K    V +   +   +  S        LR  GI  E+   +
Sbjct: 346 GVTRVVARILSQGFAQASRKVPSAVFVALTN--DEGWSAANDVADALRARGIACEVSANA 403

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +K FG Q+KYA++R  P      + E    + ++KD+  G++++ +  +     E    Q
Sbjct: 404 AK-FGKQIKYAEKRGIPFVWFISSDESGAPVHEVKDIRSGEQVAADPASWMPPAEDLHVQ 462

Query: 474 I 474
           I
Sbjct: 463 I 463


>gi|257076309|ref|ZP_05570670.1| histidyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 429

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 101/454 (22%), Positives = 188/454 (41%), Gaps = 41/454 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E  +GF D   +++ +RN     I N  EN+G+  I+ P LE  D         +  
Sbjct: 1   MKVEKLKGFRDHYPEDMEVRNYFFKKITNAAENFGYQLIDFPSLEPLDLYRLKSG-TEIV 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           N   FS  D  G+ +++  + T    R +      +  P R Y    V+R E+   GRFR
Sbjct: 60  N-QTFSFTDKGGREVTMIPEATPSTVRLLTARK-DLPRPVRWYSFPKVWRYEEPQEGRFR 117

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q + D  G  +E ADAE+  + +  L+ +G+    Y I IN+R +++ +L+ + +  
Sbjct: 118 EHYQFNADVFGLDSEEADAEIVGLASSILDYLGL-SGVYEININDRFLMEYVLKDLNIED 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL-- 244
                  +   + +D                    +  +  KG     ++I  ++S L  
Sbjct: 177 IPDAFSIIDKYKKVD------------------KSSFIEAFKGIGAGEDEIKKILSLLGE 218

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +D+     ++  +V      +     +    +L+    Y  ++I    +IVRGL YYTG
Sbjct: 219 KVDIGNMEKKIKRVVNNYEEIKPRIERIKKTFDLIGL--YTESKINFDFSIVRGLSYYTG 276

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+EA                 ++ GGGRYDGL   F  + +PA GF+IG + + + LK 
Sbjct: 277 IVFEAF---------DVKGELRAILGGGRYDGLSQLFTQEKIPAAGFAIGDAVIELLLKR 327

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                    +    +      + D +        ++R+    A + + + +   +Q+K A
Sbjct: 328 QNLWLKRNIKESYYICNLSSENDDYI---IKVASVIRSLNKIAVVDM-THRKISSQMKSA 383

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
                  A+I G  E     L +K++   ++ + 
Sbjct: 384 --SGFDFAVIIGEREIEENTLTVKNMHSSEQSTI 415


>gi|119961996|ref|YP_948029.1| histidyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119948855|gb|ABM07766.1| putative histidyl-tRNA synthetase (hisS) [Arthrobacter aurescens
           TC1]
          Length = 449

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 139/476 (29%), Positives = 208/476 (43%), Gaps = 50/476 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            GF +   +E  +   +LD++R  +E +GF  IET  +E    L +        +K V+ 
Sbjct: 8   SGFPEWLPQERLVELHVLDTLRKTFELHGFSSIETRAVETVGQLLRKGE----IDKEVYG 63

Query: 72  --SLQDDDGQ----------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              LQDD+G+           ++L +DLT P ARYV EN   + FP R Y+I  V+R E+
Sbjct: 64  LSRLQDDEGEAAKSDKADPNALALHFDLTVPFARYVVENAGYLAFPFRRYQIQKVWRGER 123

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR R+F Q D+D VG        ++ + +        +   D+ + INNRK+ +G  
Sbjct: 124 PQEGRAREFTQADIDIVGDGELPFRYDVEIALVIAEALRALPIPDFRLRINNRKLAEGFY 183

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             IG      L +   VLR+IDKL+K G   V  LL        G   + A L  E   I
Sbjct: 184 RGIG------LTDTAGVLRSIDKLEKIGAAKVAELL----KSELGATDEQAGLALELATI 233

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                S      + ++  L       ++G NEL  + +          ++    +I RGL
Sbjct: 234 RTEDTSF-----VDQVRALGVKDDLLDEGLNELEQVIQ--AAVQRAPGKVVADLSIARGL 286

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG V E +L              GS+  GGRYD L S+   +  P  G SIG++RL+
Sbjct: 287 DYYTGTVVETVLVG--------HEQLGSICSGGRYDALASKGNRR-FPGVGLSIGVTRLV 337

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             + S E          P  +    +  DS S  Q     LR  GI  E+   + K FG 
Sbjct: 338 SRILSQEL--VKASRSVPTAVLVALNSDDSWSAAQDIAAQLRGRGIATEVAAKAEK-FGK 394

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           Q+K+ADRR  P            G  Q+KD+  G+++  +  +     E    +IT
Sbjct: 395 QIKFADRRGIPFVWFTDDD----GKHQVKDIRSGEQIDADPASWTPDEEDLYVRIT 446


>gi|241123591|ref|XP_002403927.1| histidyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215493555|gb|EEC03196.1| histidyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 445

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 100/410 (24%), Positives = 175/410 (42%), Gaps = 29/410 (7%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           K   +  +G  D    ++ +R R+  +I   ++ +G + I+TP+ E  D+L     ++  
Sbjct: 54  KFVLKTAKGTRDHGPAQMALRERVFKTIVGCFKRHGGEAIDTPVFELKDTLTGKYGED-- 111

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +K ++ L D  G+ +SLRYDLT P ARYVA N    +             N     GR+
Sbjct: 112 -SKLIYDLADQGGEILSLRYDLTVPFARYVAMNKIASIKRYHIA-KVYRRDNPAMTRGRY 169

Query: 126 RQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           R+F QCD D  G         E   ++ + L  +G+   D+ + +N+R+IL+G+ E  G+
Sbjct: 170 REFYQCDFDIAGQFDPMLPDVECVRVLTEILRDLGL--GDFVVKVNHREILNGMFEFCGV 227

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +        +  ++DKLDK   + V+  + E              L  +  D + S +
Sbjct: 228 PAES----FKTICSSVDKLDKLPWEDVRKEMVEE-----------KGLPEDVADRIFSLV 272

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS-NRIKISSTIVRGLEYYT 303
                  + +                 L      +R        +I    ++ RGL+YYT
Sbjct: 273 LRKGPLHLIQYKIRSGDGRGRRGLCFHLPDRINALRIVFIFFLFQISFDLSLARGLDYYT 332

Query: 304 GCVYEAILGFPVMNEKQKP----VVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISR 357
           G ++EA+L  P+ N+   P    V  GSV  GGRYD L  +   KG+NVP  G S+G+ R
Sbjct: 333 GIIFEAVLKEPINNDVGDPSKESVSVGSVAAGGRYDTLVGMFDSKGRNVPCVGISVGVER 392

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +++   +           +       + +++       L   G++A
Sbjct: 393 IFTLVEAKAKAEQTKLRTNETEVFVASAQKNLVAERMKICSELWDNGLKA 442


>gi|298252817|ref|ZP_06976611.1| histidyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297533181|gb|EFH72065.1| histidyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 466

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 134/486 (27%), Positives = 218/486 (44%), Gaps = 45/486 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
               GF +    E  +  +++D++R ++E  GF  IET  +E   SL K        +K 
Sbjct: 5   SSISGFPEWLPSERAVEQQVIDTLREVFELNGFIGIETRAVEQGSSLLKKGE----TSKE 60

Query: 70  VF---SLQDDD-------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           ++    LQ+          + I L +DLT PL+RYV E+   + FP + +++  V+R E+
Sbjct: 61  IYLLSRLQEVGHESDTPVEERIGLHFDLTVPLSRYVVEHTGDLTFPFKRWQMQKVWRGER 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEM--CMMMADTLEAVGIKR-NDYHIGINNRKILD 176
              GRFR+F+Q D+D VG+    +  E+   ++M + LE +         +  NNRK+ +
Sbjct: 121 PQEGRFREFVQADIDVVGNGELPSHYEVELPLVMVEALERLRKFGLPKATVHANNRKLSE 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR---TDNSGDFTKGANLT 233
           G    IGL   +       VLR IDKLDK G + V  LL +        +    + A LT
Sbjct: 181 GFYRGIGLSDIE------GVLREIDKLDKIGAEEVSKLLVKECGATASQADACLELAELT 234

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           +E  D + S      +K      +  +  +   +G   L +I +    +      +    
Sbjct: 235 AETGDELKSRFDELCDKHNISRSDDNESYVLASQGVETLAMIVD--EAARIRPGAVVADL 292

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            I RGL+YYTG VYE  L              GS+  GGRYD LVS+ K +  P  G SI
Sbjct: 293 KIARGLDYYTGSVYETFL--------DNAESLGSICSGGRYDNLVSQGK-KKYPGVGLSI 343

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+SRL+  +     +T +      VL+   + +           + LR  GI A++   +
Sbjct: 344 GMSRLLSYMLHTAGATVSRVSPAAVLVAVWNEED--RPACNAIAKTLRDRGIAADVAPSA 401

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTG-ERSRGMLQIKDLAKGKELSREIKNNESWREARV- 471
           +K  G Q+KYAD+   P         E      ++K++  G++ +    +  SW+   V 
Sbjct: 402 AK-LGKQIKYADKLGIPYVWFPADSTESESSHDEVKNIITGEQET---ADATSWQPDTVY 457

Query: 472 AQITIP 477
           A+ T+ 
Sbjct: 458 ARQTVS 463


>gi|283783248|ref|YP_003374002.1| histidine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441218|gb|ADB13684.1| histidine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 482

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 134/486 (27%), Positives = 219/486 (45%), Gaps = 45/486 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
               GF +    E  +  +++D++R ++E  GF  IET  +E   SL K        +K 
Sbjct: 21  SSISGFPEWLPSERAVEQQVIDTLREVFELNGFIGIETRAVEQGSSLLKKGE----TSKE 76

Query: 70  VF---SLQDDD-------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           ++    LQ+          + I L +DLT PL+RYV E+   + FP + +++  V+R E+
Sbjct: 77  IYLLSRLQEVGHESDTPVEERIGLHFDLTVPLSRYVVEHTGDLTFPFKRWQMQKVWRGER 136

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEM--CMMMADTLEAVGIKR-NDYHIGINNRKILD 176
              GRFR+F+Q D+D VG+    +  E+   ++M + LE +         +  NNRK+ +
Sbjct: 137 PQEGRFREFVQADIDVVGNGELPSHYEVELPLVMVEALERLRKFGLPKATVHANNRKLSE 196

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR---TDNSGDFTKGANLT 233
           G    IGL   +       VLR IDKLDK G + V  LL +        +    + A LT
Sbjct: 197 GFYRGIGLSDIE------GVLREIDKLDKIGAEEVSKLLVKECGATASQADACLELAELT 250

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           +E  D + S  +   +K      +  +  +   +G   L +I +    +      +    
Sbjct: 251 AETGDELKSRFNELCDKHNISRSDDNESYVLASQGVETLAMIVD--EAARIRPGAVVADL 308

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            I RGL+YYTG VYE  L              GS+  GGRYD LVS+ K +  P  G SI
Sbjct: 309 KIARGLDYYTGSVYETFL--------DNAASLGSICSGGRYDNLVSQGK-KKYPGVGLSI 359

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+SRL+  +     +T +      VL+   + +           + LR  GI A++   +
Sbjct: 360 GMSRLLSYMLHTAGATVSRVSPAAVLVAVWNEED--RPACNAIAKTLRDRGIAADVAPSA 417

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTG-ERSRGMLQIKDLAKGKELSREIKNNESWREARV- 471
           +K  G Q+KYAD+   P         E      ++K++  G++ +    +  SW+   V 
Sbjct: 418 AK-LGKQIKYADKLGIPYVWFPADSTESESSHDEVKNIITGEQET---ADATSWQPDTVY 473

Query: 472 AQITIP 477
           A+ T+ 
Sbjct: 474 ARQTVS 479


>gi|194379722|dbj|BAG58213.1| unnamed protein product [Homo sapiens]
          Length = 449

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 99/434 (22%), Positives = 174/434 (40%), Gaps = 50/434 (11%)

Query: 45  IETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
           ++TP       +GK+  D    +K ++ L+D  G+ + LRYDLT P ARY+A N  T + 
Sbjct: 56  LKTP---KETLMGKYGED----SKLIYDLKDQGGELLPLRYDLTVPFARYLAMNKLTNIK 108

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
                +   +  N                            +   +         ++  D
Sbjct: 109 RYHIAKDFDIAGNFDP----------------------MIPDAECLKIMCEILSSLQIGD 146

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
           + + +N+R+ILDG+    G+       +   +  ++DKLDK   + VK            
Sbjct: 147 FLVKVNDRRILDGMFAICGVSDS----KFRTICSSVDKLDKVSWEEVK-----------N 191

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRK 281
           +      L  E  D +  ++      S+ E       +       +G  +L ++ E +  
Sbjct: 192 EMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTL 251

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            G   ++I    ++ RGL+YYTG +YEA+L        ++P+  GSV  GGRYDGLV  F
Sbjct: 252 FGI-DDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMF 310

Query: 342 KGQ--NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   VP  G SIG+ R+   ++    +           +         L +       
Sbjct: 311 DPKGLKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKLLEERLKLVSE 370

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L  AGI+AE+    +    NQL+Y +    PL  I G  E   G+++++ +   +E+   
Sbjct: 371 LWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVR 430

Query: 460 IKNNESWREARVAQ 473
            ++     + R  Q
Sbjct: 431 REDLVEEIKRRTGQ 444


>gi|297243527|ref|ZP_06927459.1| histidyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888572|gb|EFH27312.1| histidyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 466

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 134/486 (27%), Positives = 218/486 (44%), Gaps = 45/486 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
               GF +    E  +  +++D++R ++E  GF  IET  +E   SL K        +K 
Sbjct: 5   SSISGFPEWLPSERAVEQQVIDTLREVFELNGFIGIETRAVEQGSSLLKKGE----TSKE 60

Query: 70  VF---SLQDDD-------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           ++    LQ+          + I L +DLT PL+RYV E+   + FP + +++  V+R E+
Sbjct: 61  IYLLSRLQEVGHESDTPVEERIGLHFDLTVPLSRYVVEHTGDLTFPFKRWQMQKVWRGER 120

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEM--CMMMADTLEAVGIKR-NDYHIGINNRKILD 176
              GRFR+F+Q D+D VG+    +  E+   ++M + LE +         +  NNRK+ +
Sbjct: 121 PQEGRFREFVQADIDVVGNGELPSHYEVELPLVMVEALERLRKFGLPKATVHANNRKLSE 180

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR---TDNSGDFTKGANLT 233
           G    IGL   +       VLR IDKLDK G + V  LL +        +    + A LT
Sbjct: 181 GFYRGIGLSDIE------GVLREIDKLDKIGAEEVSKLLVKECGATASQADACLELAELT 234

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           +E  D + S      +K      +  +  +   +G   L +I +    +      +    
Sbjct: 235 AETGDELKSRFDELCDKHNISRSDDNESYVLASQGVETLAMIVD--EAARIRPGAVVADL 292

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            I RGL+YYTG VYE  L              GS+  GGRYD LVS+ K +  P  G SI
Sbjct: 293 KIARGLDYYTGSVYETFL--------DNAASLGSICSGGRYDNLVSQGK-KKYPGVGLSI 343

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G+SRL+  +     +T +      VL+   + +           + LR  GI A++   +
Sbjct: 344 GMSRLLSYMLHTAGATVSRVSPAAVLVAVWNEED--RPACNAIAKTLRDRGIAADVAPSA 401

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTG-ERSRGMLQIKDLAKGKELSREIKNNESWREARV- 471
           +K  G Q+KYAD+   P         E      ++K++  G++ +    +  SW+   V 
Sbjct: 402 AK-LGKQIKYADKLGIPYVWFPADSTESESSHDEVKNIITGEQET---ADATSWQPDTVY 457

Query: 472 AQITIP 477
           A+ T+ 
Sbjct: 458 ARQTVS 463


>gi|291295942|ref|YP_003507340.1| histidyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470901|gb|ADD28320.1| histidyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 428

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 98/474 (20%), Positives = 175/474 (36%), Gaps = 64/474 (13%)

Query: 9   AELPRGFADCP------TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP- 61
            +   G  D             +   I+ +   +    G   + TP+ EY +   K +  
Sbjct: 2   LKAVPGTNDIFAQAKEYPFREPVFRYIISTAEEVLRGAGAQMVYTPIFEYLEVFQKGVGL 61

Query: 62  -DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEK 119
             +    K +F  +D  G+ ++LR + TA + R   E+       P R +  GP+FR E+
Sbjct: 62  TSDIVVKKEMFVFEDRGGRLLALRPEPTAAIVRAFNEHGMKVWPQPVRLFTWGPIFRGER 121

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND----YHIGINNRKIL 175
              GR++QF Q D + +G S    DAE   +M    + +G++  +          +R   
Sbjct: 122 QQKGRYKQFHQVDYEALGLSDPLLDAEAIALMVRIYKTLGLRNLEVKLGSVGDPEDRVRY 181

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           +  L ++       L+E        D   +     +++L  +   D        A +   
Sbjct: 182 NQYLRELFGPYASDLSE--------DSRVRVEANPMRILDSKSERDQ-------ALIAEL 226

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           Q   M+ FL                   A +K   ++    + +           +  ++
Sbjct: 227 QPKPMLEFLG-----------------PAAQKFHEQVCNYLDRL------GVAYTVDPSL 263

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRGL+YY    +E                  ++GGGGRYDGL     G  +P  GF IG+
Sbjct: 264 VRGLDYYVRTAWEV--------HHAGIGAKSALGGGGRYDGLSEMLGGPPLPGVGFGIGV 315

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            RL +AL+    +           +     D  +  +     + LR   I  E+   + K
Sbjct: 316 ERLAIALEQEGVALPADPSPT---LYLAPLDEAAKIEVLALAEQLRPK-IHVEIGY-TPK 370

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    L+ A ++        G  ER+RG++ +K L  G++ + E     S  E 
Sbjct: 371 SPRKALEDALKKGARYVGFIGEAERARGVVTLKHLETGEQRALEPLQLHSLFEG 424


>gi|67458890|ref|YP_246514.1| histidyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536669|sp|Q4UM71|SYH_RICFE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|67004423|gb|AAY61349.1| Histidyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 415

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 83/467 (17%), Positives = 170/467 (36%), Gaps = 63/467 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    + ++ + I++  R++   YG+  +  P+LEY+    + + +  D  
Sbjct: 4   KLQPLRGMKDLLPDDYKVHDYIINKARDVGVLYGYKQMSIPILEYTKVFNRSMGESSDVI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D   + ++LR + TA + R    N      P + +  GPVFR ++   GR R
Sbjct: 64  SKEIYSFLDKSNESVALRPEFTAGIIRSFISNGLQHKLPLKFFSTGPVFRYDRPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q + + +G+     DAE   +  D L+A+ I+++     +      +R +    L +
Sbjct: 124 QFHQLNYEYIGAKGAITDAETLKLAVDILKALEIEQDTILELNSLGCSESRSVYQQKLVE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        +   +     +++L  +   D                 I+ 
Sbjct: 184 YLNDFKDQLSE--------ESKIRLTKNPMRILDSKSEIDQK---------IIAAAPILS 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            + + +                  ++ F EL+   +++        +  I+  +VRGL+Y
Sbjct: 227 EYYTDES-----------------KEYFEELIKYLDIL------GVKYVINPRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E            K     ++  GGRYDGL       +             I  
Sbjct: 264 YCHTAFEFTTK--------KLGSQSTILAGGRYDGLAKIMGNNDDVPAIGFAAGIERIAL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++    S           +  +    +++         LR   I   +          ++
Sbjct: 316 MREYNISEVK-------PVFVLPIGENNICYALEIVDKLRLQNISTIIDPVG--KIAKRI 366

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +     N    I  G  E++   L++KDL K +E   +        +
Sbjct: 367 QRVLNENAKFIIFIGDEEQANNSLKLKDLEKKEEYIVDFAKVLELLK 413


>gi|327310354|ref|YP_004337251.1| histidyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326946833|gb|AEA11939.1| histidyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 428

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 123/463 (26%), Positives = 203/463 (43%), Gaps = 45/463 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
              RG  D   ++     R+ DS+  I E +G+  +ETP +E+ + L +    E      
Sbjct: 10  RPVRGMRDITPEQFYALRRVEDSLSRIAEAFGYRRVETPAVEHFEVLARKAGREIVD--E 67

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D  G+ + LR+D+T P+AR V         P R Y    V+R ++   GR+R+F 
Sbjct: 68  IYYFRDKAGRELGLRFDMTVPVAR-VLSYRLEEPKPVRWYYFTKVWRYDEPQHGRYREFY 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+ VGS +  ADAE+  +MA ++EAVG+K  DY I +++R  +D +L  +G+ G  +
Sbjct: 127 QFGVELVGSDSPRADAEVLALMAKSIEAVGVK--DYVIRLSDRAAMDKVLASLGVEGSRE 184

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 VLR +DK  K     +  +L              A ++ ++       L    +
Sbjct: 185 E-----VLRILDKRGKVPDDEILDMLRRAGLGGGAAEALMALVSEQRPGSEAPDLFSKYD 239

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           KS+ E Y  V   +      + LVV                    IVRGL+YYTG V+EA
Sbjct: 240 KSLGERYSRVVKALDAYGVLDRLVVDLS-----------------IVRGLDYYTGMVFEA 282

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
             G   +          +VGGGGRYD L+  + G   PA GF+IG+ R    +++   + 
Sbjct: 283 YAGEYKL----------AVGGGGRYDNLIELYSGIRTPALGFAIGVER---LMEAAGIAP 329

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   +         D+        + LR  G    + LG        L++A +   
Sbjct: 330 AEYP----LDYYIYPMTEDAFKVAAEVAEALRNKGASVAIDLGE-LTLREALEHAAKTGV 384

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              +I G  E  +G+++I+D+ +  EL  E+       ++  A
Sbjct: 385 RHFVIIGKKELEKGVVKIRDMRRRVELEVELGRIREGLQSLSA 427


>gi|15920522|ref|NP_376191.1| histidyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|32130136|sp|Q975U9|SYH_SULTO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|15621305|dbj|BAB65300.1| 426aa long hypothetical histidyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 426

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 102/486 (20%), Positives = 197/486 (40%), Gaps = 64/486 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E  RG  D   +E+     + ++   I +  G+  +ETP++E          +E R 
Sbjct: 2   ISYEPVRGMKDYYGEELHKIKVVENAFLKIVKLAGYQEVETPIVEDFQLFALKGGEELRN 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              ++  +D  G+ ++LR + T  + R+   +   +  P R Y +G V+R ++   GR+R
Sbjct: 62  T--MYVFKDKAGREVALRPEFTPSIVRFYLNSLQHLPKPIRLYYLGTVYRYDEPQFGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  ++ +GSS   +D E+  ++ +    + +  N   + INN  ++  IL K+ +  
Sbjct: 120 EFRQAGIELLGSSNIYSDLEILQILIEIYRELNL-INKIRLKINNISLIRKILNKLNISD 178

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + +                   +    L+ +G+ D +         +SE  +++ + LS+
Sbjct: 179 NLQ-------------------EHFLHLIDKGKIDEALSLLP----SSEYTELITNILSV 215

Query: 247 DLEK--SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +     S +++ E +      +    +L  I  L            I    VRGL YYTG
Sbjct: 216 NNLDISSYNKIKEDLTEKYNLKDLIQDLDRIMLLKNILDNLGVNSYIDLGFVRGLAYYTG 275

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++E +           P V  S+ GGGRYD LV  + G   PA GF+IG+ R  + L+ 
Sbjct: 276 LIFEVL----------HPSVSFSIAGGGRYDNLVELYGGPQTPAIGFAIGVERTALVLEE 325

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL-KY 423
             +      +     I  +    +++         LR+    A + L S  +    +  Y
Sbjct: 326 PNTVKEKQNK-----IGVIVLSDEAILYAIRIVDKLRSNNYIATINLKSI-SISKLIPSY 379

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           A+       I  G  E     + +K+L+  +++                  TI    L+ 
Sbjct: 380 AEE-GYSFLIFIGKKEYEDKTITLKNLSTKEQV------------------TIKEENLLD 420

Query: 484 TVKKIL 489
            +K+I+
Sbjct: 421 YLKQII 426


>gi|301165788|emb|CBW25360.1| histidyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 436

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 103/460 (22%), Positives = 188/460 (40%), Gaps = 32/460 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D    + R+++ I + +R+  E + F+  E P+LE          +E   N+ ++S
Sbjct: 9   KGTRDFFPADKRVQDYIFNKMRSSAEAFAFEGYEGPMLEEVALYKAKSGEELI-NEQIYS 67

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +D   +++++R ++T  +AR VA+    I  P + Y I  + R EK   GR R+  Q +
Sbjct: 68  FEDRGNRFVAIRPEMTPTVARMVAQVHREIPKPIKWYSIPNLMRYEKPQRGRLREHWQFN 127

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
            D  G    +++ E+  ++     + G     + I IN+R+I++ +   +    ++   +
Sbjct: 128 CDIFGEVGRSSEIEILQLITHLFNSFGANSEHFEILINDREIVNIVFNDLMKIDEETSYK 187

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                  +DK  K   +G++ ++ E    +  +      L+ +  + + SFL        
Sbjct: 188 LYK---IVDKAKKVKPEGLEKMISELNLSSEAEAIFKKYLSLQNFEELFSFLEE------ 238

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                  KG      GF EL      +       + +    TIVRGL+YYTG V+E    
Sbjct: 239 -------KGYGEKSNGFKELFQ----ITSEIGLKDYLVYDPTIVRGLDYYTGIVFEVF-- 285

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                  + P    ++ GGG Y  L+  F    VP  GF +G   L   L + +   +  
Sbjct: 286 ------DKNPENRRALCGGGAYANLLQIFNENPVPGVGFGLGDVTLTDFLITHKLMPDLS 339

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
           K    V +        +++K       +R  G ++   L + K F      AD+      
Sbjct: 340 KN--EVDLYLTFQSDRAVAKNFELANKVREMGFKSLNSLETIK-FKKVFSNADKFGARFV 396

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            I G  E   G  Q+K+LA  +    +    +  RE   A
Sbjct: 397 SILGDKELDEGFFQVKNLATKESFDIKFSELDKLRELLNA 436


>gi|154148607|ref|YP_001406486.1| histidyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166227957|sp|A7I1U5|SYH_CAMHC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|153804616|gb|ABS51623.1| histidyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 410

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 96/462 (20%), Positives = 178/462 (38%), Gaps = 55/462 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D    E ++  +I+D   +  + YG++ IE P LE +    + + +  D   
Sbjct: 2   IQALRGMNDMMDDEAKLYKKIIDVCEDTAKKYGYEYIEIPKLEETALFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D  G  + LR + TA + R   E+         + +  G +FR E+   GR R
Sbjct: 62  KEMYQFTDKSGNDVCLRPEGTAGVVRAFIEHKMDRAGGVKKYFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  ++     +   DA + +M+++ L+ + I+       + +   +    EK+    
Sbjct: 122 EFHQFGIECFSEGSVYEDASVILMLSEILKKLDIEATLKINSLGDGDCMPKYREKLLKFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +  NE        D   +     +++L  + + ++     + A L +E ++ +      
Sbjct: 182 KENENEL-----CSDCKRRISTNPIRVL--DCKVEHCQKILQNAPLITENLNEI------ 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                                   E   + E++  +G      ++   +VRGL+YYT   
Sbjct: 229 ---------------------CAGEFSKLQEILTANG---VTFEVDPKLVRGLDYYTKTA 264

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          +     +VGGGGRYD LV+   G+     GF++GI R +  L S E
Sbjct: 265 FEFV--------SGEIGSQSAVGGGGRYDNLVAFLGGRPTFGVGFALGIERFMEILSSKE 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  +   V I     D   + K       LR    + E+    +KN    LK AD 
Sbjct: 317 ------SKQKRVGIYICALDKKYIDKIFKIGIDLRR-NFKVEISY-EAKNLQKHLKNADN 368

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +N  + +  G  E     L +K+L      + +I        
Sbjct: 369 KNAEIFLCMGENEAKNDELFMKNLIAKTNKNIKIAEILKEIR 410


>gi|27904761|ref|NP_777887.1| histidyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29611876|sp|P59482|SYH_BUCBP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|27904158|gb|AAO26992.1| histidyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 425

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 86/460 (18%), Positives = 170/460 (36%), Gaps = 60/460 (13%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-ED 64
           K      +G  D    ++     I   ++ I +NY ++ I  PL+E +      + +  D
Sbjct: 2   KEIIRSIKGMHDYIPDDVITWQYIEYIVKRILKNYCYNEIRFPLIEKTSLFAHSIGNITD 61

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              K ++S +D   + I+LR + T    R             + + +GP+FR E+   GR
Sbjct: 62  IIEKEMYSFKDKKNKKITLRPEGTIGCMRACINKGLLRTSKQKLWYLGPMFRYERPQHGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGIL 179
           +RQF Q  ++ +G S    D E+ +++   L  + I        +      +R     IL
Sbjct: 122 YRQFHQFGIEVLGMSGPDIDLEIILLVERILRTLNISNYVQLELNSIGSYESRLHYKKIL 181

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                  +             D   +  +  +++L  + +   +               I
Sbjct: 182 FSYFKQYE--------ACLDEDCKRRLYVNPLRILDSKDKNIKA---------IINNAPI 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ F+  +       L +L+K                              ++  +VRGL
Sbjct: 225 LMDFIDDNSLIHFENLCKLMKNI-----------------------GISYVVNYKLVRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E                  ++  GGRYD L        +PA G +IG+ RL+
Sbjct: 262 DYYNKTVFEWKTNL--------LGAKDAICAGGRYDNLSKSLGVTFIPAIGCAIGMERLV 313

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNF 417
           + +KSL+      K    + +  +    +   +    ++++RT     +  + + SS N 
Sbjct: 314 LLIKSLKLKP---KTNNAIDVFIIFLKDNIQIEAIKLSELVRTQFPKKKIMLSILSS-NL 369

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             Q   A++    + ++ G  E    ++ +KDL  G + S
Sbjct: 370 RKQFSTANKIKARIVLLLGPNEVKNNLILLKDLTSGYQKS 409


>gi|308177519|ref|YP_003916925.1| histidine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744982|emb|CBT75954.1| histidine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 440

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 137/479 (28%), Positives = 214/479 (44%), Gaps = 52/479 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K  L      GF +    E  +   +LD++R+++E +GF  IET  +E    L +  
Sbjct: 1   MARKASL-----SGFPEWLPAERAVEQHVLDTLRHVFELHGFANIETRAVETRAQLLRKG 55

Query: 61  PDEDRPNKGVFSLQ------DDDG-QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
                 +K V+ L       D +    ++L +DLT P ARYV EN   + FP R Y++  
Sbjct: 56  E----IDKEVYGLSRLAAEDDKNDPNALALHFDLTVPFARYVVENAGHLAFPFRRYQMQK 111

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GRFR+F Q D+D VG        ++ + +        +   D+ + +NNRK
Sbjct: 112 VWRGERPQDGRFREFTQADIDVVGDGTLPFSYDVELALTIADALSALPIGDFRLRVNNRK 171

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +GL   D +      LRAIDKL+K G   V  +L E     +        L 
Sbjct: 172 LAEGFYRGLGLADPDAV------LRAIDKLEKIGDDAVAKILVEEVGATAEQAAAALALA 225

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                     +       + ++  L       + G +EL  + E    S     ++    
Sbjct: 226 K---------IRTVDTSFVEQVRALGVTHELLDTGLDELSQVIE--AASKRAPGKVMADL 274

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           +I RGL+YYTG VYE +L              GS+  GGRY+ L S+ K +N P  G SI
Sbjct: 275 SIARGLDYYTGTVYETVLVG--------HESLGSICSGGRYESLASKGK-KNYPGVGLSI 325

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G++RLI  + + E  T +      V +T  +   +S  + Q     LR  GI  E+   S
Sbjct: 326 GVTRLISRILAEEVVTASRSVPSVVYVTLAN--DESWHEAQDVASALRERGIACEVA-AS 382

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ++ FG Q+KYADRR  P          + G  ++KD+  G+++S    +  SW  A   
Sbjct: 383 AEKFGKQIKYADRRGIPFVWF----THADGTHEVKDIRSGEQVS---ADPASWMPAEAD 434


>gi|19074312|ref|NP_585818.1| HISTIDYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74664199|sp|Q8SRR3|SYHC_ENCCU RecName: Full=Probable histidyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Histidine--tRNA ligase; Short=HisRS
 gi|19068954|emb|CAD25422.1| HISTIDYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 435

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 118/472 (25%), Positives = 205/472 (43%), Gaps = 47/472 (9%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P+G  D   ++  +   I++ IR ++  YG  PI TP  E    L     ++    K
Sbjct: 4   LKTPKGTMDESPRQCFLHEEIIERIRRVFVLYGAVPISTPTFEMKSILTNKYGED---TK 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRFR 126
            ++ L+D  G+  +LRYDLT P ARY+A N    +   + Y+IG V+R ++     GR R
Sbjct: 61  LIYDLKDQGGEICALRYDLTVPFARYLASNK---IRRMKRYQIGRVYRRDQPSIARGRLR 117

Query: 127 QFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           +F+Q D D         ADAE+   +   L   G    +Y I +N+R+IL  ILE +G+ 
Sbjct: 118 EFVQADFDIAGECIQMMADAEVVSCVDRILSMFG--IGEYRIKVNDRRILTSILEVVGVS 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +        V   IDK++K   + +   L                L+ EQ+     +++
Sbjct: 176 CES----YGTVCSTIDKIEKMSWEDIGREL------------VLKGLSEEQVRTTKKYMT 219

Query: 246 IDLEKSMHE--LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  ++ +      + V G    +   +++  +  L R  G  S  + +  ++ RGL+YYT
Sbjct: 220 MGGKEDVLGLLKADPVYGIERCKAAVHDMEELFRLCRILGC-SGSLVMDISLARGLDYYT 278

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR--FKGQNVPATGFSIGISRLIVA 361
           G + EA                GSV GGGRYD L      +  + P  GFS+G+SR+   
Sbjct: 279 GMILEAEYVGK---------SVGSVIGGGRYDNLTENLGERCVSTPCVGFSVGVSRIFSL 329

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L           +    ++         L +     ++L+ A I +E F     +F +Q 
Sbjct: 330 LYE------EYDKESSTMVYVGASGGLFLDERLSVLRILQDANICSETFYTRRSSFESQQ 383

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           KY  ++  P  ++ G  E + G +Q+ +    K+   +++   S+      Q
Sbjct: 384 KYVAKKKIPFIVVVGESEIAAGSVQVINALTRKKEIVKVEQMVSYLLDPENQ 435


>gi|15836195|ref|NP_300719.1| histidyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8979035|dbj|BAA98870.1| histidyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 430

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 104/468 (22%), Positives = 180/468 (38%), Gaps = 58/468 (12%)

Query: 7   LRAELPRGFADCPT--KEIR-------IRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +   LP+G  D      + +       + + +  +I  +   YGF  I TP+ E S+   
Sbjct: 1   MTVTLPKGVFDIFPYLADAKQLWRHTSLWHSVEKAIHTVCMLYGFCEIRTPIFEKSEVFL 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
               + D   K V+S+ D  G+ ++LR + TA +     E+  +     + Y I P+FR 
Sbjct: 61  HVGEESDVVKKEVYSVLDRKGRSMTLRPERTAAVVSAFLEHGASHRSDIKFYYILPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GR+RQ  Q  V+ +G      DAE+  ++ D    VG++     +          
Sbjct: 121 ERQQAGRYRQHHQFGVEAIGVRHPLRDAEVLALLWDFYSRVGLQHMQIQLNFLGGSETRF 180

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             +K+      +    L  L       +F    +++L  +   D              Q 
Sbjct: 181 RYDKVLRAYLKESMGELSALS----QQRFSTNVLRILDSKEPEDQE---------IIRQA 227

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             ++ ++S                         +L   +E++           I+  +VR
Sbjct: 228 PPILDYVSD-----------------------EDLKYFNEILDALRVLEIPYAINPRLVR 264

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY+  V+EA   F  ++          +GGGGRYDGL+S F G ++PA GF +G+ R
Sbjct: 265 GLDYYSDLVFEATTTFQEVSYA--------LGGGGRYDGLISAFGGASLPACGFGVGLER 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
            I  L + +             +  +  + D+      ++Q LR  GI  E+   S K  
Sbjct: 317 AIQTLLAQKRIEPQFP----HKLRLIPMEPDADQFCLEWSQHLRRLGIPTEVDW-SHKKV 371

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              LK A         + G  E     L IK+++  KE     +  E 
Sbjct: 372 KGALKAASTEQVSFVCLIGERELISQQLVIKNMSLRKEFFGTKEEVEQ 419


>gi|221059553|ref|XP_002260422.1| histidine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193810495|emb|CAQ41689.1| histidine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 1056

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 114/540 (21%), Positives = 203/540 (37%), Gaps = 94/540 (17%)

Query: 3    KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
            K      ++P+G  D   +++++RN   D I+  +  +G   I+TP+ E  ++L     +
Sbjct: 544  KNINFNLKVPKGAKDFTGEDMQLRNIFFDFIKKKFLLHGAVEIDTPVFELKETLTDKYGE 603

Query: 63   EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR----TYRIGPVFRNE 118
            +   +K +F L++  G+ +SLRYDLT PL R+V  N    +          R  P     
Sbjct: 604  D---SKLIFDLKEQGGENLSLRYDLTVPLYRFVNTNNLNSLKRFHIGKVYRRDEPSMNRG 660

Query: 119  KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
            +        F      +   +       +  +  D L  +     +++  IN+RKIL+ +
Sbjct: 661  RFREFYQCDFDIVGKYDTLRTDFH----ILFIFWDILNNLKNVIGNFNCKINHRKILEYM 716

Query: 179  LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            L    +H D    +   +  +IDKLDK   Q  +  L                +  E +D
Sbjct: 717  LLSSNIHKD----KVKTISSSIDKLDKITFQQFRDEL-----------LNEKGIPVESVD 761

Query: 239  IMVSF----LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR------KSGYNSNR 288
             + ++    LS+     +  L   +  +   E   NE+  +   +       K     N+
Sbjct: 762  KIETYISKTLSLSPFLVIEFLRNDLSESPFEESYKNEVYQVINHLEELFELLKHFNMLNQ 821

Query: 289  IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
                 ++ RGL+YYTG ++E +L              GSV  GGRYD L+   + + +P+
Sbjct: 822  FSFDLSLARGLDYYTGIIFEFVLLSET--------GVGSVAAGGRYDYLIRNKRKEYIPS 873

Query: 349  TGFSIGISRLIVA------------------LKSLESSTNNIKE---------------- 374
             G S+GI R+I                    L + +  T                     
Sbjct: 874  VGASVGIERIIAIAEGVVKKGGLLLPPGEGGLLTKKEVTMEDAPLGKVASSVNVASSGLS 933

Query: 375  --MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 V +   +   +   +     + L    I  E      +    QL YA  +  PLA
Sbjct: 934  LKENSVDVLICNIKKNCFKETIELCKKLWEEDISTEFIYVKDQKIQKQLVYALEKQIPLA 993

Query: 433  IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            +I G  E  RG++++++L + KE S               +  I + + V  +K    EN
Sbjct: 994  VIIG-DEIERGVIKLRELTQDKEKSA-------------GEREIKLDDCVQEIKNYFSEN 1039


>gi|308811216|ref|XP_003082916.1| P0627E03.18 gene product (ISS) [Ostreococcus tauri]
 gi|116054794|emb|CAL56871.1| P0627E03.18 gene product (ISS) [Ostreococcus tauri]
          Length = 585

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 93/444 (20%), Positives = 175/444 (39%), Gaps = 45/444 (10%)

Query: 21  KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
            +  +   + D +   +        + P+LE      +   +E      +++  D   + 
Sbjct: 187 ADSMMLRHLRDPLARRF--------DAPVLESEALFTRKAGEE--ITTQLYNFVDKGDRR 236

Query: 81  ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
           ++LR +LT   AR + +   ++  P + + IG  +R E+   GR R+  Q ++D VG S 
Sbjct: 237 VALRPELTPSFARLILQQGKSLALPAKWFAIGQCWRYERMTRGRRREHYQWNMDIVGVSG 296

Query: 141 ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
             A+AE+   +    + VG+   D  I +++RK+L  +L + G+  D        V   +
Sbjct: 297 IEAEAELLAAITTFFKRVGVTSADVGIKVSSRKLLQEVLTRYGIGSD----AFAPVCVVV 352

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           DK++K   + ++  L E              +    I+ +++   +   + +  L     
Sbjct: 353 DKIEKLPREKIEDELRE------------LGVAEGAIEGILAATQMRTVEELEAL----- 395

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                 +   +L  +       GY  + +   + +VRGL YYTG V+E            
Sbjct: 396 -IGPDAEAVKDLKQLFAYADAYGYR-DWLVFDACVVRGLAYYTGVVFEGF---------D 444

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
           +     ++ GGGRYD L+    G+N P  GF  G + ++  LK            G    
Sbjct: 445 RAGELRAICGGGRYDMLLGALGGENQPMVGFGFGDAVIVELLKDKGLMP--DFSRGDTQD 502

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
                              LR +G   ++ L   K      K A+R      I+ G  E 
Sbjct: 503 LVFPLSESLRPAAMRVAASLRESGRTVDLVL-EDKKAKWAFKQAERIGAERVILLGEKEW 561

Query: 441 SRGMLQIKDLAKGKELSREIKNNE 464
             G +++KDLA  +E+  +I + +
Sbjct: 562 EAGNVRVKDLATREEVDVKIDDLK 585


>gi|224372416|ref|YP_002606788.1| histidyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588748|gb|ACM92484.1| histidyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 386

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 108/448 (24%), Positives = 172/448 (38%), Gaps = 69/448 (15%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D    E     +I D+ R I ENYG+  IETP+LE +    + + +  D  N
Sbjct: 2   IKALRGMKDI---EDPRFLKIFDTAREIAENYGYSYIETPVLEETALFKRSVGESSDIVN 58

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFR 126
           K ++   D  G  + LR + TA + R   E+       P R +  GP+FR E+   GR R
Sbjct: 59  KEMYQFTDKGGNDVCLRPEGTAGVVRSFIEHKYDKAQTPKRFWYFGPMFRYERPQKGRLR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI----KRNDYHIGINNRKILDGILEKI 182
           +F Q  +++ G  +   D  +  M AD  +A+GI    K N    G    K  + ++E +
Sbjct: 119 EFHQFGIESFGEPSIYEDINIIAMAADIFDALGIEYTLKINSLGCGECMPKYREKLVEFL 178

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            LH +D            D   +     ++ L  + + D+     K A         +  
Sbjct: 179 NLHKEDL---------CEDCQRRITQNPIRTL--DCKVDSCQAILKDA-------PKITD 220

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L  + +K    L + ++      +    L                       VRGL+YY
Sbjct: 221 NLCENCQKDFETLKKGLENLGIKYEVDKNL-----------------------VRGLDYY 257

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +   +E +                ++ GGGRYD LV    G+  P  GF+IGI R++  +
Sbjct: 258 SKTTFEFVSTE--------IGAQSAIAGGGRYDRLVEYLGGKPTPGVGFAIGIERIMELV 309

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K+ +             I       D+L   Q   + LR    +        K+    LK
Sbjct: 310 KTEK---------TRKGIYIGVMLEDALEFAQKEAKNLRKNE-KVYFEPKV-KSLKAHLK 358

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDL 450
            AD+ N   A+I G  E        K+L
Sbjct: 359 AADKGNYKKAMIVGEEELKNKTFFEKEL 386


>gi|238063881|ref|ZP_04608590.1| histidyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885692|gb|EEP74520.1| histidyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 442

 Score =  192 bits (488), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 142/491 (28%), Positives = 203/491 (41%), Gaps = 64/491 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T +      GF +    +  I   +LD IR  +E YGF P+ET  +E  D L +  
Sbjct: 1   MSKPTPI-----SGFPEWTPAQRMIEQFVLDRIRATFELYGFAPLETRSVEPLDQLLRKG 55

Query: 61  PDEDRPNKGVFSL----QDDDG----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
                 +K V+ L     D DG      + L +DLT P ARYV EN   + FP R Y+I 
Sbjct: 56  E----TSKEVYVLRRLQADADGPAGDDSLGLHFDLTVPFARYVLENAGRLQFPFRRYQIQ 111

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GR+R+F+Q D+D V      A  E  M +        +      I +NNR
Sbjct: 112 KVWRGERPQEGRYREFLQADIDIVDRDTLPAHYEAEMPLVIGDALRSLPIPPVTIQVNNR 171

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           KI +G    IGL   +        LRA+DKLDK G   V  LL E            A  
Sbjct: 172 KICEGFYRGIGLTDPEAA------LRAVDKLDKIGPVKVAELLAE-----------TAGA 214

Query: 233 TSEQIDIMVSFLSIDLEK--SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           +  Q    ++   I          +  L       ++G  EL  + E    + ++     
Sbjct: 215 SEAQAKACLALAEISAPDGSFADAVRGLGVSHPLLDEGIAELAAVVE--TAAAHSPGLCV 272

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
               I RGL+YYTG VYE  L             FGSV  GGRYD LVS     + P  G
Sbjct: 273 ADLRIARGLDYYTGTVYETSLAG--------HERFGSVCSGGRYDNLVSAGG-VSFPGVG 323

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG+SRL+  L    +    +    P  +       +  S        LR  G+  E+ 
Sbjct: 324 ISIGVSRLLGLL--FGAGALTVSRSVPTCVLVAVTSEELRSASNAVADALRRRGVPTEVA 381

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             ++K FG Q+++A+RR  P     G         ++KD+  G+++            A 
Sbjct: 382 PSAAK-FGKQIRHAERRGIPYVWFPGVDGAPD---EVKDIRSGEQV-----------VAA 426

Query: 471 VAQITIPISEL 481
             + T P ++L
Sbjct: 427 AGEWTPPRADL 437


>gi|330840299|ref|XP_003292155.1| hypothetical protein DICPUDRAFT_7467 [Dictyostelium purpureum]
 gi|325077610|gb|EGC31311.1| hypothetical protein DICPUDRAFT_7467 [Dictyostelium purpureum]
          Length = 407

 Score =  192 bits (488), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 91/453 (20%), Positives = 173/453 (38%), Gaps = 51/453 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  +G  D    E R+ + +    +++ E YG++ I TP++E  +   + + +  D   
Sbjct: 1   LKSIKGTYDYFPNEKRVYSFVNQIGKSVSELYGYEEISTPIIEPFELFNRSVGEYSDIVM 60

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF--PCRTYRIGPVFRNEKHGPGRF 125
           K +F+ +D  GQ I LR + TA + R +     T       + Y  GP+FR E+   GR 
Sbjct: 61  KEMFTFKDLSGQAICLRPEGTAGVIRAIINEGSTTSTSPTQKYYYSGPMFRYERPQKGRQ 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   + +G S   +D E+  M    +E +GI  + +H+ IN+    + I +     
Sbjct: 121 RQFEQFGAELIGDSHPRSDVEIIDMAYHFIEKLGIPSDQFHLKINSLGDKNSI-KTYSDA 179

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +    ++  L             +++L  + + D            ++   ++ ++LS
Sbjct: 180 LTEFYQGKIDKLSPDSIKRLQRGNALRILDSKDKGDIE---------INKDAPLLQNYLS 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              ++    + E +                            + +I + +VRGL+YY   
Sbjct: 231 DSCKQRFKSVLEGLDNL-----------------------GIKYQIDNGLVRGLDYYRHT 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           ++E I+    +          ++ GGGRYDGL +    ++          S +   L  +
Sbjct: 268 IFEIIILKDNL----------AILGGGRYDGLANNIGYKHNEILPSIGWASGIDRILIYI 317

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM--FLGSSKNFGNQLKY 423
                  K     ++      SDS          LR  G    +  F    +N   QLK 
Sbjct: 318 NQDIIPKKSNPIGIVIGNQIFSDS---AMSLCSRLRKNGFYTVLPTFKLDEENMTKQLKK 374

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
             + N    +I G  E     + IK++ +  + 
Sbjct: 375 ISKFNPNFVVIFGEDEMKSNSVCIKNMNERTQE 407


>gi|126640574|ref|YP_001083558.1| histidyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 399

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 91/451 (20%), Positives = 156/451 (34%), Gaps = 70/451 (15%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDDDG--QWISLRYDLTAPLAR 93
            + YG+  I  P++E +    + + D  D   K +++  D     + ++LR + TA   R
Sbjct: 1   MDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMYTFFDKGNPPESLTLRPEGTAGCVR 60

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
            + E+        R + +GP+FR EK   GR+RQF Q  V+  G +    +AE+ +M A 
Sbjct: 61  ALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFHQFGVETFGVATPDIEAEVILMTAR 120

Query: 154 TLEAVG---------IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
             + +G             +       R  L   L +     D+            D   
Sbjct: 121 LWKRMGVAHMVQLELNTLGEKEERTEYRNALVAFLNEHKDALDE------------DSQR 168

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA 264
           +     +++L  +  +              E    +  FL  D      +L + +     
Sbjct: 169 RLTTNPLRILDSKIESTQK---------ILENAPKLYDFLKEDSLSHFQQLQDYLTAA-- 217

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
                                  +  I+  +VRGL+YY   V+E                
Sbjct: 218 ---------------------GIKFVINQKLVRGLDYYNKTVFEWTTTA--------LGS 248

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
            G+V GGGRYDGLV + KG+   +         +   L  +E                  
Sbjct: 249 QGTVCGGGRYDGLVGQLKGKADQSVPAVGFGMGMERLLLLIEQVEQAEIVRDCEAFLVA- 307

Query: 385 HDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
            +    SK  +  + LR     A     +  GS  +  +Q+K AD+     AII G  E 
Sbjct: 308 -EPAYQSKALVLAEQLRDQLEAANSNIRIKTGSQGSMKSQMKKADQAGAVYAIILGEREW 366

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARV 471
               L IK+LA  ++    +     +   + 
Sbjct: 367 EAQQLAIKELATAEQSQVALAELVPFLIEKF 397


>gi|311113682|ref|YP_003984904.1| histidine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945176|gb|ADP41470.1| histidine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 455

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 132/495 (26%), Positives = 216/495 (43%), Gaps = 56/495 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K  L      GF +    E  + N +LD++R  +E +GF  IET  +E  + L +  
Sbjct: 1   MARKASL-----SGFPEYLPAERLVENHVLDTLRKTFELHGFSSIETRSVETIEQLLRKG 55

Query: 61  PDEDRPNKGVF---SLQDDD----GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
                 +K V+    L DD+     + ++L +DLT P ARYV EN   + FP   Y+I  
Sbjct: 56  D----IDKEVYSISRLLDDNATKAKEKLALHFDLTVPFARYVVENAGYLNFPFSRYQIQK 111

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GR R+F Q D+D VG        ++ + +        +   D+ + +NNRK
Sbjct: 112 VWRGERPQEGRAREFTQADIDVVGDGELPFRYDVTLALVVVDALSKLPIPDFKLRVNNRK 171

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +G      L +   VLR+IDKL+K G   V           + +  + A  +
Sbjct: 172 LAEGFYRGLG------LTDTAAVLRSIDKLEKIGADAV-----------AQELQREAGAS 214

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELV--RKSGYNSNRI 289
            EQ    +    I  E S    ++ EL +      +  +  V+    V    +     ++
Sbjct: 215 EEQAQAALELAQIRTEDSSFAAQVRELAEQYKVEHELLDRGVIELAEVIDEAARRAPGKV 274

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
               +I RGL+YYTG VYE +L              GS+  GGRY+ L S  K    P  
Sbjct: 275 LADLSIARGLDYYTGTVYETVLVG--------HESLGSICSGGRYESLASNGKKT-YPGV 325

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G SIG++RL+  + S   +    K    V I   +   +  S        LR+ GI  E+
Sbjct: 326 GLSIGVTRLVARILSQGFAQATRKVPSAVFIALTN--DEGWSAANDVADALRSRGIACEV 383

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQ---GTGERSRGMLQIKDLAKGKELSREIKNNESW 466
              ++K FG Q+KYA++R  P          GE +    ++KD+  G++++ +       
Sbjct: 384 SANAAK-FGKQIKYAEKRGIPFVWFISTEDDGELA---HEVKDIRSGEQVAADPAIWMPP 439

Query: 467 REARVAQITIPISEL 481
            E    ++ +P   +
Sbjct: 440 EEDLNVRV-VPAESI 453


>gi|149194438|ref|ZP_01871535.1| histidyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135613|gb|EDM24092.1| histidyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 386

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 95/445 (21%), Positives = 161/445 (36%), Gaps = 63/445 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D   K      +I D+ R + ENYG+  IETP+LE +    + + +  D  N
Sbjct: 2   IKALRGMKDILDK---RFLKIFDTAREVAENYGYSYIETPILEETKLFKRSVGESSDIVN 58

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFR 126
           K ++   D  G  + LR + TA + R   E+       P R +  GP+FR E+   GRFR
Sbjct: 59  KEMYEFIDKGGNDVCLRPEGTAGVVRSFIEHKFDKAGIPKRFWYFGPMFRYERPQKGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  +++ G  +   D  +  + ++  + + I        +  +K +    EK+    
Sbjct: 119 EFHQFGIESFGEESVYEDINIISLASEIFDKLNINYTLKINSLGCKKCMPNYKEKLVKFL 178

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +             D   +     ++ L  + +T              +    +   L  
Sbjct: 179 NQHKENL-----CEDCQRRINQNPIRTLDCKNQT---------CQAILKDAPKITDNLCQ 224

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +    +L   +K      +    L                       VRGL+YYT   
Sbjct: 225 QCQSDFEKLKSGLKNLEINYEVDKHL-----------------------VRGLDYYTKTT 261

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I                ++ GGGRYD LV    G+     GF+IG+ R++  +K  +
Sbjct: 262 FEFISNE--------IGSQSAIAGGGRYDKLVEFLGGKPTAGVGFAIGVERILDLVKIED 313

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYAD 425
                        I       +++   Q   + LR    I  E+     K+    LK AD
Sbjct: 314 KRE---------GIYMGAMIEEAIPYIQKEAKKLRKNQKIFVEV---KPKSLKAHLKAAD 361

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDL 450
           +     A+I G  E        K+L
Sbjct: 362 KGMYKKALIVGEDELKNNTFFEKEL 386


>gi|300741588|ref|ZP_07071609.1| histidine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380773|gb|EFJ77335.1| histidine--tRNA ligase [Rothia dentocariosa M567]
          Length = 455

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 133/495 (26%), Positives = 214/495 (43%), Gaps = 56/495 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K  L      GF +    E  + N +LD++R  +E +GF  IET  +E  + L +  
Sbjct: 1   MARKASL-----SGFPEYLPAERLVENHVLDTLRKTFELHGFSSIETRSVETIEQLLRKG 55

Query: 61  PDEDRPNKGVF---SLQDDD----GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
                 +K V+    L DD+     + ++L +DLT P ARYV EN   + FP   Y+I  
Sbjct: 56  D----IDKEVYSVSRLLDDNATKAKEKLALHFDLTVPFARYVVENAGYLNFPFSRYQIQK 111

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GR R+F Q D+D VG        ++ + +        +   D+ + +NNRK
Sbjct: 112 VWRGERPQEGRAREFTQADIDVVGDGELPFRYDVTLALVVVDALSKLPIPDFKLRVNNRK 171

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +G      L +   VLR+IDKL+K G   V   L                 +
Sbjct: 172 LAEGFYLGLG------LTDTAAVLRSIDKLEKIGADAVAQELQREV-----------GAS 214

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELV--RKSGYNSNRI 289
            EQ    +    I  E S    ++ EL +    G +  +  V     V    +     ++
Sbjct: 215 EEQAQAALELAQIRTEDSSFAAQVRELAERYKVGHELLDRGVTELAEVIDEAARRAPGKV 274

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
               +I RGL+YYTG VYE +L              GS+  GGRY+ L S  K    P  
Sbjct: 275 LADLSIARGLDYYTGTVYETVLVG--------HESLGSICSGGRYESLASNGKKT-YPGV 325

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G SIG++RL+  + S   +    K    V I   +   +  S        LR+ GI  E+
Sbjct: 326 GLSIGVTRLVARILSQGFAQATRKVPSAVFIALTN--DEGWSAANDVADALRSRGIACEV 383

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQ--GTG-ERSRGMLQIKDLAKGKELSREIKNNESW 466
              ++K FG Q+KYA++R  P       G   E +    ++KD+  G++++ +  +    
Sbjct: 384 SANAAK-FGKQIKYAEKRGIPFVWFISTGDNGELA---HEVKDIRSGEQVTADPASWMPP 439

Query: 467 REARVAQITIPISEL 481
            E    ++ +P   +
Sbjct: 440 EEDLNVRV-VPAESI 453


>gi|315647593|ref|ZP_07900695.1| histidyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315277032|gb|EFU40373.1| histidyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 426

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 101/460 (21%), Positives = 194/460 (42%), Gaps = 37/460 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +  +G  D   KE  +R ++  ++R+++E+Y ++ +E+ +L   + L       +   K 
Sbjct: 2   QNVKGTYDYFGKEQAVRRKVQSTLRDVFESYDYEEMESTILNERELLSSKYAGGEEIQKE 61

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++ L D   + + LRYDLT P A+ +A N   I  P + + +G VFR+     GR R+F+
Sbjct: 62  MYQLTDQGKRDLGLRYDLTIPFAKVIAFN-PGIELPFKRFEMGKVFRDGPVKRGRLREFL 120

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           QCDVD VG     A+ E+  +  +    + I      +  NN + L  +LE +G+  + K
Sbjct: 121 QCDVDVVGIPGPEAEVELMQLAVEAFRRLEIPVL---LRWNNSRFLGEVLESMGVPAEMK 177

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               L     +DK++K G +GV+  L                L  E  D ++ F+ +   
Sbjct: 178 STVMLT----LDKIEKIGREGVRQELVSKV------------LAPEVCDHILEFVDLKEP 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                  ++V     G+      V + + + +             + RGL +YTG VYE 
Sbjct: 222 S----FEQIVGRYRVGDNPGAREVQMLQDMLQRVGLEQDCVFDPFLSRGLSFYTGTVYEI 277

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +GGGGRYD +++   G++  A         +   ++ + +  
Sbjct: 278 FDVSGSYRSS--------LGGGGRYDAIIAHLVGRDDIAYPTVGLSFGMESIMEMIRNRP 329

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
               +   ++I       D++ +      +LR  G+R E    + +     L  A     
Sbjct: 330 MGTSKPQVIVIPI----GDAIPEGLRAAAVLRNQGLRTEFAH-NGRKLKKTLSKASSDGI 384

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           P  I+ G  E + G +++KD+ +  E+   ++   ++ + 
Sbjct: 385 PYVILIGEEEAAAGQVRLKDMHENTEVQMRLEEVVAFMKQ 424


>gi|66825929|ref|XP_646319.1| histidine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|74997419|sp|Q55D12|SYHM_DICDI RecName: Full=Probable histidyl-tRNA synthetase, mitochondrial;
           AltName: Full=Histidine--tRNA ligase; Short=HisRS;
           Flags: Precursor
 gi|60474324|gb|EAL72261.1| histidine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 501

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 103/480 (21%), Positives = 179/480 (37%), Gaps = 59/480 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            +  +G  D    E RI   I D  R + E YGF  I TP++E  +   + + +  D   
Sbjct: 56  LQNIKGTYDLFPNEQRIHKFIFDVGRGVAERYGFKEISTPIIEPFELFNRSVGESSDIVM 115

Query: 68  KGVFSLQDDDGQ------WISLRYDLTAPLARYVAENF--DTIVFPCRTYRIGPVFRNEK 119
           K +F  +D   +       I LR + TA + R +      + +    R Y  GP+FR E+
Sbjct: 116 KEMFKFKDYSNESSSPPSMICLRPEGTAGVIRAIINQSSTNHLTPAQRYYYQGPMFRYER 175

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR RQF Q  V+ +G     +D E+  M  + +E +GI ++D  + IN+    D I 
Sbjct: 176 PQRGRQRQFHQLGVELIGDQHPRSDVEIIDMAMNFIERLGINKSDTLLKINSLGDTDSI- 234

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +          N+ +  L  I          +++L  + R D   +              
Sbjct: 235 KVYNETLKRFYNDNVNKLSPISIKRLERGNSLRILDSKERQDIELNKL---------APS 285

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +   LSI  +   +                        +++         +I  ++VRGL
Sbjct: 286 IQDSLSIQCKDRFN-----------------------NVLKGLDCLGISYEIDKSLVRGL 322

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGS-----VGGGGRYDGLVSRFKGQNV---PATGF 351
           +YY   ++E  +     N K +           + GGGRYDGL ++   +     P+ G+
Sbjct: 323 DYYRHTIFEIQIIDNNQNNKGQRQQQQQQQGLAILGGGRYDGLANQLGYKYKEILPSIGW 382

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           + GI R+++ L   +   +         I     DS            LR  G  + +  
Sbjct: 383 ASGIERMVLFLDQSKIPNSIRP------IGIAITDSSLSENAFKLCSNLRRNGWSSTLST 436

Query: 412 G--SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                +N   QLK   + N    II    E S   + IK++    +    +   +++ E 
Sbjct: 437 FNLEDENLSKQLKK-FKNNPSFVIILAPSEYSNNTVIIKNMDDTTQSIIPLNEIDNFLEN 495


>gi|297819142|ref|XP_002877454.1| histidyl-tRNA synthetase 1 [Arabidopsis lyrata subsp. lyrata]
 gi|297323292|gb|EFH53713.1| histidyl-tRNA synthetase 1 [Arabidopsis lyrata subsp. lyrata]
          Length = 442

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 96/427 (22%), Positives = 176/427 (41%), Gaps = 63/427 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           + K+    P+G  D P +++R+RN + +  + +   YGF+ ++ P+LE      +   +E
Sbjct: 64  QKKIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLYGFEEVDYPVLETEALFIRKAGEE 123

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            R    ++  +D   + ++LR +LT  LAR V +   ++  P + + +G  +R E+    
Sbjct: 124 IRD--QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRV 181

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R R+  Q ++D +G    TA+AE+   +    + +GI  +D    +++RK          
Sbjct: 182 RRREHYQWNMDIIGVPQVTAEAELISSIVTFFKRIGITASDVGFKVSSRK---------- 231

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                          +     D          ++ + I+ ++  
Sbjct: 232 -------------------------------IENIPIDEIKKELGFTGMSEDAIEQLLQV 260

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS+   KS+ +L +++ G     +   +L  +  L  K GY S  I+  +++VRGL YYT
Sbjct: 261 LSV---KSLDDLEDILGGAG---EAIADLKQLFSLAEKFGY-SEWIQFDASVVRGLAYYT 313

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+E            +     ++ GGGRYD L+S + G ++ A GF  G + +   LK
Sbjct: 314 GIVFEGF---------DRKGKLRAICGGGRYDRLLSTYGGDDIAACGFGFGDAVIFELLK 364

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             +      +E   V       D D           LR  G   ++ L  +K      K 
Sbjct: 365 EKDLLPELGQE---VENIVCALDKDLQEAAATVATALRDKGQTVDLVL-ENKPLKWVFKR 420

Query: 424 ADRRNCP 430
           A R N  
Sbjct: 421 AARVNAR 427


>gi|183014154|dbj|BAG24406.1| hypothetical protein [Photobacterium damselae subsp. damselae]
          Length = 432

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 94/422 (22%), Positives = 170/422 (40%), Gaps = 48/422 (11%)

Query: 16  ADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQ 74
            D    E  I   +   +R   +NYG+  I  P+LE  +   + + +  D  +K ++   
Sbjct: 23  KDILPTETPIWQWVEKVLRKATKNYGYKEIRLPILEPIELFQRAVGEATDIVSKEMYDFI 82

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
           D   + I+LR + T+   R V EN        R +  GP+FR E+   GR RQF Q  V+
Sbjct: 83  DKSNEHITLRPEGTSGCVRSVIENNLCYNNTQRLWYQGPMFRYERPQKGRLRQFNQFGVE 142

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
             G S    D+E+  +  +   A+G+ +   ++ IN+   ++  LE           ++ 
Sbjct: 143 TFGMSNADIDSELIYLSNEIFSALGLTKY-INLEINSLGTIEERLE--HRKALINYFKKH 199

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
             L   D L +     +++L  +     +           E    ++ +L+ +       
Sbjct: 200 QDLLDEDSLIRLEKNPLRILDSKNPQMQTM---------LENAPKLLDYLTGESLDHFKT 250

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +                            +  I+  +VRGL+YYT  V+E      
Sbjct: 251 VCSNLD-----------------------QVDIKYTINPRLVRGLDYYTRTVFEWTT--- 284

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
                 +     +V GGGRYDGLV+ F GQ++PA+GF+IGI RLI+ L+++  +  +   
Sbjct: 285 -----DQLGSQSTVCGGGRYDGLVALFSGQSLPASGFAIGIERLILLLEAVNITPPHDSS 339

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG-SSKNFGNQLKYADRRNCPLAI 433
                I     D    +K  +  + LR    + E++   S      Q + A + +  + +
Sbjct: 340 KK---IIFTCEDKLDTNKALILAKNLRDTFPKLEVYSDFSGSKLKKQHQRALKESADIVV 396

Query: 434 IQ 435
             
Sbjct: 397 TL 398


>gi|255021266|ref|ZP_05293315.1| Histidyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969277|gb|EET26790.1| Histidyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 441

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 91/440 (20%), Positives = 169/440 (38%), Gaps = 61/440 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K     +  RG  D   ++      +   +R     YGF  I  PLLE+S+   + +
Sbjct: 1   MAHKG---LQAVRGMNDLFPEDTVAWQALETILREQLRRYGFGEIRLPLLEHSELFARAI 57

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            D  D   K +++  D +G  ++LR + TA + R + E+        R Y +GP+FR+E+
Sbjct: 58  GDVTDIVQKEMYTFLDRNGDSLTLRPEGTAGVVRALIEHGRLRGTQARLYYVGPMFRHER 117

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN---DYHIGINNRKILD 176
              GR+RQF Q  V+  G +  ++DAE+  + A  L ++G++     +       R    
Sbjct: 118 PQKGRYRQFHQLGVEMFGLADPSSDAELIALSARLLNSIGVRAELQINSLGTPEARAHYR 177

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
            +L +      ++L          D  ++     +++L  +          +     +  
Sbjct: 178 ELLRQYLRPQTERL--------CPDCRERLERNPLRVLDCK---------VESCRTVAAD 220

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++  L  +      +L   +                              ++++++V
Sbjct: 221 APRLLEHLDSESAAHFQQLRSYLD-----------------------VLGIPYRVNTSLV 257

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +               G+V  GGRYDGLV +  G   PA GF+ G+ 
Sbjct: 258 RGLDYYHRTVFEWV--------SDALGAQGTVLAGGRYDGLVEQLGGPATPALGFAAGLE 309

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+           +      V +     D  +++      + LR       + +G   +
Sbjct: 310 RLLALRALAG----SAYPAARVQLFLGALDPQAMAAVLQRAEALRVG--GVAVVVGGPAS 363

Query: 417 FGNQLKYADRRNCPLAIIQG 436
               LK A+R +  +  I G
Sbjct: 364 LKVLLKQAERSDAQMQAIVG 383


>gi|225630808|ref|YP_002727599.1| histidyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254782356|sp|C0R4G6|SYH_WOLWR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|225592789|gb|ACN95808.1| histidyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 408

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 101/469 (21%), Positives = 167/469 (35%), Gaps = 74/469 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +  RG  D    E      I  +   I   YGF P +TP+ EY++   K L D  D 
Sbjct: 1   MTNQTVRGTKDFLFDEWYKFKHIEQTASRISNLYGFLPAQTPIFEYTEVFTKTLGDSSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K ++S  D  G+ I+LR + TA + R + E         + +  GP FR E+   GR 
Sbjct: 61  ITKEMYSFNDKGGKSITLRPEFTAAIVRLLIEKKLQTP--IKLFSTGPAFRYERPQKGRQ 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q + +  G     AD E+  ++   L   GI +          D       R+ L 
Sbjct: 119 RQFHQINFEVFGIEDPKADIELISLVQHLLTEFGINKNVKLEINSLGDGETITKYREALI 178

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
               K      +            D  ++     +++L  +   D S             
Sbjct: 179 LYFTKYQNDLSE------------DSKNRLIKNPLRILDSKDEKDKS---------IISD 217

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              + ++ +        ++   +                               +++ +V
Sbjct: 218 APKISNYYTKGSSDFFEQILNGLT-----------------------ILDIPYTVNNKLV 254

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +         +     G+V  GGRYD LVS   G++ PA GF+ GI 
Sbjct: 255 RGLDYYCHTVFEFVT--------EDLGAQGAVFAGGRYDNLVSSVGGKHTPAIGFAGGIE 306

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R++  +        N        I  +    ++          LR  G+        S  
Sbjct: 307 RIMELI--------NYSPKEERPIYLIPIGREAEKHALTLANELRRNGLYVIYEY--SGT 356

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              ++K A++ N   A+I G  E S   L+IK++  G+E      N   
Sbjct: 357 LRTRMKKANQANAKAALIFGDEELSSKTLKIKNMNTGEEKIIARDNTIE 405


>gi|284032292|ref|YP_003382223.1| histidyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283811585|gb|ADB33424.1| histidyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 445

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 143/481 (29%), Positives = 211/481 (43%), Gaps = 51/481 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T +      GF +    +  +  + LD+IR  +E +GF  IET  +E  + L    
Sbjct: 1   MTKVTPI-----SGFPEFLPSDRIVELQFLDTIRETFELHGFASIETRAVEPVERLSNQG 55

Query: 61  PDEDRPNKGVFSL------QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            D D   K ++ +       DDDG  + L +DLT P ARYV E+   + FP R Y+I  V
Sbjct: 56  EDAD---KEIYGVRRLAAGADDDGPGLGLHFDLTVPFARYVLEHAGKLAFPFRRYQIQKV 112

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           +R E+   GR+R+F Q D+D V S       E+ + +        +   ++ + +NNRKI
Sbjct: 113 WRGERPQEGRYREFTQADIDIVDSGELPNHYEVELPLVIADALSRLPVPEFVVKVNNRKI 172

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
            +G    +GL       +   VLR +DK+DK G   V   L E     +G   K A L  
Sbjct: 173 PEGFYRGLGLD------DVTTVLRIVDKIDKIGPDKVVERLVE-----AGATDKQARLAV 221

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +  D     LS      + ++  L       ++G  +L  +      + +    +     
Sbjct: 222 QLAD-----LSSTDTSFVEKVRALGVEHETLDEGLEQLSQVMA--AAAEHAPGLLMADLR 274

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           I RGL+YYTG VYE  L             FGSVGGGGRYD L S  K    P  G SIG
Sbjct: 275 IARGLDYYTGAVYEIYLVGQE--------SFGSVGGGGRYDALASDGKTT-YPGVGISIG 325

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           +SRL+  L S      +      VLI   + D    ++       LR  GI  E+   ++
Sbjct: 326 VSRLVHRLVSQGLVKGSRSTPTAVLIALNNEDD--RAEAMRTAAQLRQRGIPVEVAPAAA 383

Query: 415 KNFGNQLKYADRRNCPLAII-QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K FG Q+K+ADRR  P      G      G  ++KD+  G+++  +        +    Q
Sbjct: 384 K-FGKQIKFADRRGIPFVWFSTG-----NGS-EVKDIRSGEQVPADPATWTPPTDDVRPQ 436

Query: 474 I 474
           I
Sbjct: 437 I 437


>gi|117928542|ref|YP_873093.1| histidyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117649005|gb|ABK53107.1| histidyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 441

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 120/471 (25%), Positives = 193/471 (40%), Gaps = 52/471 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  GF +    E      +++ IR ++E +GF P+ T  +E  D L +        
Sbjct: 1   MITSL-SGFPEWLPAEQIAEQLVIERIRRVFELHGFTPLHTRAVEPLDRLLRGGD----V 55

Query: 67  NKGVFSLQ------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            K ++ L+      DD G  + L +DLT P ARYV EN   + FP R Y+I  V+R E+ 
Sbjct: 56  EKEIYVLRRLHADDDDAGTGLGLHFDLTVPFARYVVENAGRLTFPFRRYQIQKVWRGERP 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFR+F Q D+D V      A  E+ + +        +      I +NNRK+ +G   
Sbjct: 116 QEGRFREFTQADIDIVDRGDLAAHYEIELPLVIAEALAALPIPPVRIQVNNRKLAEGCYR 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +G        +   VLR +DKL K G   V+  L              + L++      
Sbjct: 176 ALG------ARDVPTVLRIVDKLGKIGPDAVEREL-----------VAHSGLSAAAARTC 218

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           ++   I        + +L       + G  EL  + + V         + +   I RGL+
Sbjct: 219 LALAEIRGRDVAERVRKLGLTGELIDDGLAELARVVDGVEAVWPGLVEVDLR--IARGLD 276

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYE  L              GS+  GGRYD L +    +  P  G SIG+SRL+ 
Sbjct: 277 YYTGTVYETALAG--------HEDLGSISSGGRYDNLAAEGTTR-YPGVGMSIGVSRLLA 327

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            + +            P  +       +   +     + LR+ GI A++   ++K +G Q
Sbjct: 328 RMLTQ----VTASRSVPTCVLVAVPSEERRPEADRIARQLRSRGIPADVSPSAAK-YGKQ 382

Query: 421 LKYADRRNCPLAIIQG-TGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ++YA RR  P     G           +KD+  G + + +  + +   + R
Sbjct: 383 IQYASRRGIPFVWFPGAPD-------SVKDIRSGDQYAADAGSWQPPEDDR 426


>gi|257459505|ref|ZP_05624614.1| histidyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442930|gb|EEV18064.1| histidyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 413

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 98/464 (21%), Positives = 178/464 (38%), Gaps = 55/464 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  RG  D   ++ RI ++IL+    +  NYGF  IETP LE +    + + +  D   
Sbjct: 2   IKALRGMNDILDEQARIYSQILNVCERVARNYGFCLIETPKLEQTALFRRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRFR 126
           K ++   D  G  + LR + TA + R   E            Y  G +FR E+   GR R
Sbjct: 62  KEMYEFSDKSGDSVCLRPEGTAGVVRAFIEKKLDRSGGVHKFYYQGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+  G S+   DA + +M+A  L  + +        + + + +     K+    
Sbjct: 122 EFHQFGVECFGQSSVYEDASVILMLAQILRELNVAATLKINSLGDEECMPAYKTKLVNFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +  +         D   +     +++L  + + ++       A L +E ++        
Sbjct: 182 QEHKDRL-----CEDCQRRIDTNPIRVL--DCKNESCQKILAAAPLITENLN-------- 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                              +    E   + +++ ++G    + +I + +VRGL+YY    
Sbjct: 227 -------------------DACAAEFTQLQKILTQNGQ---KFQIDAKLVRGLDYYCKTA 264

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          +     +VGGGGRYD LV    G+     GF+IGI R+   LK+ E
Sbjct: 265 FEFV--------SSELGAQSAVGGGGRYDRLVEFLGGRKTAGVGFAIGIERIAEILKTRE 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +            I     D   +S    +   LR    + ++     ++    LK AD 
Sbjct: 317 A------PQEREGIYIGALDEAFVSTAFSFALKLRKF-CKTQISY-EPRSLAKHLKAADG 368

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 +  G  E  R  +  K+L      + + K  E++ + R
Sbjct: 369 AEAKFCLCIGQDEFDRAEVWCKNLEDQSTFAIKFKEVEAFFKDR 412


>gi|157964383|ref|YP_001499207.1| histidyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844159|gb|ABV84660.1| Histidyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 441

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 88/463 (19%), Positives = 173/463 (37%), Gaps = 55/463 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    + ++ + I++  R++   YG+  + TP+LEY+    + + +  D  
Sbjct: 31  KLQPLRGMKDLLPDDYKVHDYIINKARDVGALYGYKQMSTPILEYTKVFNRSMGESSDVI 90

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D     ++LR + TA + R +  N      P + +  GPVFR ++   GR R
Sbjct: 91  SKEIYSFLDKSNDSVALRPEFTACIIRSLISNGLQHKLPLKFFSTGPVFRYDRPQAGRQR 150

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + + +G+     DA+   +  D L+A+ I+++               L  +G + 
Sbjct: 151 QFHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLE-----------LNSLGCNE 199

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
              + ++ +V    D  D+   +  + L                         ++   S 
Sbjct: 200 SRSVYQQKLVEYLNDFKDQLSEESKRRLSKNPM-------------------RILDSKSK 240

Query: 247 DLEKSMHELYELVKGT-IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             +K +     L +      ++ F EL+   +++        +  I+  +VRGL+YY   
Sbjct: 241 TDQKIIAHAPVLSEYYTDESKEYFEELIKYLDIL------GVKYSINPRLVRGLDYYCHT 294

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            K     ++  GGRYDGL       +             I  ++  
Sbjct: 295 VFEFTTK--------KLGSQSTILAGGRYDGLAKIMGNNDDVPAIGFAAGIERIALMREY 346

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             S          L+  +    +++         LRT  I   +          +++   
Sbjct: 347 NISEVK-------LVFVLPIGKNNICYALEIVDKLRTENIATIIEPLG--KIAKRMQRIF 397

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
             N    I  G  E++   L+IKDL K +E   +        +
Sbjct: 398 NENAKFIIFIGDEEQAHNNLKIKDLKKEEEYIVDFAKALELLK 440


>gi|303244762|ref|ZP_07331092.1| histidyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302484896|gb|EFL47830.1| histidyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 373

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 105/414 (25%), Positives = 177/414 (42%), Gaps = 46/414 (11%)

Query: 53  SDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           S S  K   ++ R  K +F  +D   + + LR +LT+ + R+       +  P + Y   
Sbjct: 4   SSSYLKKTGEDIR--KQLFVFKDHGNREMGLRPELTSSVVRFYINELKNLPKPLKLYYFA 61

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
             FR E    GR+R+F Q   + +GS    ADAE+  +  D L  + +   DY I I + 
Sbjct: 62  NCFRYENPQAGRYREFWQMGCELIGSKYPIADAEIINLAMDGLNKIDM---DYEINIGHL 118

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
            +L GI ++  L  D++L                    ++ L+ +       ++      
Sbjct: 119 GVLRGIFKEFNLSEDEEL-------------------KIRRLIDKEDYKGLENYLSEIKS 159

Query: 233 TSEQIDIMVSFLSIDLEKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           + E  DI+   L+   +KS + +L E++K      +  N L  I E V+      + I +
Sbjct: 160 SDELRDIIFKILNSKGDKSVISDLKEVLKDYPTSIEAMNNLEEILEFVKH-----DNIVV 214

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  I RGL+YYTG V+E            K      V GGGRYD L+  F  +  PA GF
Sbjct: 215 NFGIARGLDYYTGMVFEIY---------GKKEGARQVCGGGRYDNLIELFGEKPTPAVGF 265

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           + G  R+++ +   E       E   +LI  +  D   L +      +LR +G   E+ L
Sbjct: 266 AYGFDRVMLNIDDFEV------EDESILIIPIKKDKKLLKECLNIADVLRKSGKSVEIEL 319

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             ++     L YA+       II G  E S+G + +K++  G++    +   E+
Sbjct: 320 -MNRKLNKALNYANAVGINKVIIVGEQELSKGKVSLKNMKTGEQELVGLDELEN 372


>gi|91774260|ref|YP_566952.1| histidyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|91713275|gb|ABE53202.1| Histidyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 377

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 97/430 (22%), Positives = 169/430 (39%), Gaps = 53/430 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++   PRG  D   +E   R  I + +RN+   + +  + TP  E  +       +    
Sbjct: 1   MKVSKPRGTRDFLPEETARRRNIENIMRNVVNKWDYKEVITPTFENLELFTLKSGEG--V 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +++  D   + ++LR +LTAP+ R           P + +     FR E+   GRFR
Sbjct: 59  IGELYNFNDKGNRNMALRPELTAPVMRMYVNEMQATPKPLKLFYFENCFRYERPQKGRFR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +GS+   ADAE+  +    L A GIK + +   +       GI+  I    
Sbjct: 119 EFWQFGVEVIGSNRADADAEIIALATTMLNAAGIKGDLHVGHL-------GIIRHILREL 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + +  ++  ++R +DK D  GL+     +               N   E    ++  + I
Sbjct: 172 EPE--QQSKIMRLVDKKDDSGLEEYFEEI---------------NAPVELRRNLLELICI 214

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
               ++ +  E++           E+    +L+           I+  I RGL+YYTG V
Sbjct: 215 TGTDAITKAREILGD-------IEEIDKFEQLLTFLNAYEIDYSINLGIARGLDYYTGMV 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E           +       V GGG Y  L+S F G +VP+TGF +G  R    ++  E
Sbjct: 268 FEIY--------AEGLGAQNQVCGGGSY-QLISLFGGGDVPSTGFGLGFDR---IMEVCE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                 K         +    ++       T  LR   +   + +   +NF  QL +A+ 
Sbjct: 316 IMPEKQKS------VVVISTDETRIDAIQVTTSLRKE-LTVYLDI-MQRNFKTQLSHANN 367

Query: 427 RNCPLAIIQG 436
                A+I G
Sbjct: 368 IEADYAVIVG 377


>gi|157737211|ref|YP_001489894.1| histidyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157699065|gb|ABV67225.1| histidyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 413

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 92/467 (19%), Positives = 178/467 (38%), Gaps = 66/467 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K TK   +  RG  D   +E  +    +++   I +NYGF  +ETPLLE +    + + +
Sbjct: 7   KSTK-TIQSLRGMKDIVNEESTLFTYFIENASKIAKNYGFSYLETPLLEETALFKRSVGE 65

Query: 63  E-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKH 120
             D  NK ++   D     + LR + TA + R+  E          + Y  GP+FR E+ 
Sbjct: 66  SSDIVNKEMYQFIDKGENDVCLRPEGTAGVVRHFVEKKLDRAGGNYKWYYYGPMFRYERP 125

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI----KRNDYHIGINNRKILD 176
             GR R+F Q   +  G  +   DA + +M+ + L+  GI    K N            +
Sbjct: 126 QKGRLREFHQFGCEVFGIDSVYEDANIIIMIKEILDFFGIGFILKLNSLGCKECMPPYKE 185

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
            +++ +    D+            D   +     +++L  + + +        A      
Sbjct: 186 NLVKHLTSFKDEL---------CEDCNRRILTNPIRVL--DCKNEKCQSLLVNA------ 228

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              + + L         +L E++       +  + L                       V
Sbjct: 229 -PKITNNLCNSCNDDFEKLKEILDFNNISYEIDSNL-----------------------V 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY    +E +                ++ GGGRYD LV    G++    GF+IGI 
Sbjct: 265 RGLDYYNKTAFEFVSNE--------IGAQSAIAGGGRYDRLVEFLGGKSTAGIGFAIGIE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+  +K        + ++   ++     D  SL+         R    +  +   + ++
Sbjct: 317 RLLELIK--------MPKVEEDIVYLGALDEKSLNTVIKTAIKKRKTT-KTLVEY-APRS 366

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           FG     A++    +  + G  E + G + IK++   ++++++++  
Sbjct: 367 FGKHFGIAEKLGANIVALIGENELNSGTIYIKNIKTQEQINKKLEEF 413


>gi|331703343|ref|YP_004400030.1| histidyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801898|emb|CBW54051.1| Histidyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 414

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 93/457 (20%), Positives = 176/457 (38%), Gaps = 57/457 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D    E ++ N++   ++ I + + +  I TP+ E  +   + +    D  +
Sbjct: 2   LQKPRGTQDFFLDEAKLWNKVETKLKEILDQFNYSEIRTPMFESKELFIRSIGSTTDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K ++   D   + + L+ + TA + R V EN        P + Y I P+FR E+   GR+
Sbjct: 62  KEMYEFVDKKNRSLVLKPEGTASVVRAVIENKLYAEENLPLKVYYISPMFRYERPQNGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTL--EAVGIKRNDYHIGINNRKILDGILEKIG 183
           RQF Q  ++  GS +   D E+  +    +    +      Y   +   K  +  + ++ 
Sbjct: 122 RQFHQLGIEVFGSDSIQQDYEVLNIATKIINQFKLNKNIKIYTNFLITGKNREDYILELK 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  D            D   +     +++L  +       +           +  M  F
Sbjct: 182 KYLSDFKL-------CNDCNTRLEKNPLRVLDCKIDDKQFKN-----------VPSMQDF 223

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ + +    +  EL K                         +  +     +VRGL+YYT
Sbjct: 224 LTKEQKTRYDQTLELFKK-----------------------TNISVIHDDKLVRGLDYYT 260

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G ++E         +        ++  GGRY+ LV+     N+ A GF +G+ R I  +K
Sbjct: 261 GFIFEIKYLNNNNEQ--------TIIAGGRYNNLVNEIGNINLAACGFGMGLERFINIIK 312

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
              S+  N K    + + T+  D  ++   Q    + R+ G++A+       +  + LK 
Sbjct: 313 EQNSNLVNQK--TNIDLYTICIDDLAIELNQQILDLTRSIGLKADSNYY-HLSLKSALKK 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           AD+ N    II G+ E       IKD     ++   +
Sbjct: 370 ADKLNPKYVIILGSNEAKTNEFIIKDQINKTQIKTTL 406


>gi|315636924|ref|ZP_07892148.1| histidine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315478754|gb|EFU69463.1| histidine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 413

 Score =  190 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 92/467 (19%), Positives = 177/467 (37%), Gaps = 66/467 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K TK   +  RG  D   +E  +    +++   I +NYGF  +ETPLLE +    + + +
Sbjct: 7   KSTK-TIQSLRGMKDIVNEESTLFTYFIENASKIAKNYGFSYLETPLLEETALFKRSVGE 65

Query: 63  E-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKH 120
             D  NK ++   D     + LR + TA + R+  E          + Y  GP+FR E+ 
Sbjct: 66  SSDIVNKEMYQFIDKGENDVCLRPEGTAGVVRHFVEKKLDRAGGNYKWYYYGPMFRYERP 125

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI----KRNDYHIGINNRKILD 176
             GR R+F Q   +  G  +   DA + +M+ + L+  GI    K N             
Sbjct: 126 QKGRLREFHQFGCEVFGIDSVYEDANIIIMIKEILDFFGIGFILKLNSLGCKECMPPYKQ 185

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
            +++ +    D+            D   +     +++L  + + +        A      
Sbjct: 186 NLVKHLTSFKDEL---------CEDCNRRILTNPIRVL--DCKNEKCQSLLVNA------ 228

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              + + L         +L E++       +  + L                       V
Sbjct: 229 -PKITNSLCNSCNDDFEKLKEILDFNNISYEIDSNL-----------------------V 264

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY    +E +                ++ GGGRYD LV    G++    GF+IGI 
Sbjct: 265 RGLDYYNKTAFEFVSNE--------IGAQSAIAGGGRYDRLVEFLGGKSTAGIGFAIGIE 316

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+  +K        + ++   ++     D  SL+         R    +  +   + ++
Sbjct: 317 RLLELIK--------MPKVEEDIVYLGALDEKSLNTVIKTAIKKRKTT-KTLVEY-APRS 366

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           FG     A++    +  + G  E + G + IK++   ++++++++  
Sbjct: 367 FGKHFGIAEKLGANIVALIGENELNSGTIYIKNIKTQEQINKKLEEF 413


>gi|256384437|gb|ACU79007.1| histidine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385270|gb|ACU79839.1| histidine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455715|gb|ADH21950.1| histidine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 414

 Score =  190 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 94/465 (20%), Positives = 178/465 (38%), Gaps = 57/465 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D    E ++ N++   ++ I + + +  I TP+ E  +   + +    D  +
Sbjct: 2   LQKPRGTQDFFLDEAKLWNKVETKLKEILDQFNYSEIRTPMFESKELFIRSIGSTTDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K ++   D   + + L+ + TA + R V EN        P + Y I P+FR E+   GR+
Sbjct: 62  KEMYEFVDKKNRSLVLKPEGTASVVRAVIENKLYKEENLPLKVYYISPMFRYERPQNGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTL--EAVGIKRNDYHIGINNRKILDGILEKIG 183
           RQF Q  ++  GS +   D E+  +    +    +      Y   +   K  +  + ++ 
Sbjct: 122 RQFHQLGIEVFGSDSIQQDYEVLNIATKIINQFKLNENIKIYTNFLITGKNREDYILELK 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  D            D   +     +++L  +       +           +  M  F
Sbjct: 182 KYLSDFKL-------CNDCNTRLEKNPLRVLDCKIDDKQFKN-----------VPSMQDF 223

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ + +    +  EL K                         +  +     +VRGL+YYT
Sbjct: 224 LTKEQKTRYDQTLELFKK-----------------------TNISVIHDDKLVRGLDYYT 260

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G ++E         +        ++  GGRY+ LV+     N+ A GF +G+ R I  +K
Sbjct: 261 GFIFEIKYLNNNNEQ--------TIIAGGRYNNLVNEIGNINLAACGFGMGLERFINIIK 312

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
              SS  N K    + + T+  D  ++   Q    + R+ G++A+       +  + LK 
Sbjct: 313 EQNSSLVNQK--TNIDLYTICIDDLAIELNQQILDLTRSIGLKADSNYY-HLSLKSALKK 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           AD+ N    II G+ E       IKD     ++   +     + +
Sbjct: 370 ADKLNPKYVIILGSNEAKTNEFIIKDQINKTQIKTTLTKFIKYLK 414


>gi|42560881|ref|NP_975332.1| histidyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|54039667|sp|P62372|SYH_MYCMS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|42492378|emb|CAE76974.1| histidine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320579|gb|ADK69222.1| histidine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 414

 Score =  190 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 94/457 (20%), Positives = 176/457 (38%), Gaps = 57/457 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPN 67
            + PRG  D    E ++ N++   ++ I + + +  I TP+ E  +   + +    D  +
Sbjct: 2   LQKPRGTQDFFLDEAKLWNKVETKLKEILDQFNYSEIRTPMFESKELFIRSIGSTTDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRF 125
           K ++   D   + + L+ + TA + R V EN        P + Y I P+FR E+   GR+
Sbjct: 62  KEMYEFVDKKNRSLVLKPEGTASVVRAVIENKLYAEENLPLKVYYISPMFRYERPQNGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTL--EAVGIKRNDYHIGINNRKILDGILEKIG 183
           RQF Q  ++  GS +   D E+  +    +    +      Y   +   K  +  + ++ 
Sbjct: 122 RQFHQLGIEVFGSDSIQQDYEVLNIATKIINQFKLNKNIKIYTNFLITGKNREDYILELK 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  D            D   +     +++L  +       +           +  M  F
Sbjct: 182 KYLSDFKL-------CNDCNTRLEKNPLRVLDCKIDDKQFKN-----------VPSMQDF 223

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ + +    +  EL K                         +  +     +VRGL+YYT
Sbjct: 224 LTKEQKTRYDQTLELFKK-----------------------TNISVIHDDKLVRGLDYYT 260

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G ++E         +        ++  GGRY+ LV+     N+ A GF +G+ R I  +K
Sbjct: 261 GFIFEIKYLNNNNEQ--------TIIAGGRYNNLVNEIGNINLAACGFGMGLERFINIIK 312

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
              SS  N K    + + T+  D  ++   Q    + R+ G++A+       +  + LK 
Sbjct: 313 EQNSSLVNQK--TNIDLYTICIDDLAIELNQQILDLTRSIGLKADSNYY-HLSLKSALKK 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           AD+ N    II G+ E       IKD     ++   +
Sbjct: 370 ADKLNPKYVIILGSNEAKTNEFIIKDQINKTQIKTTL 406


>gi|13357845|ref|NP_078119.1| histidyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762008|ref|YP_001752369.1| histidyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920173|ref|ZP_02931562.1| histidyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508753|ref|ZP_02958226.1| histidyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701935|ref|ZP_02971579.1| histidyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|32130153|sp|Q9PQK6|SYH_UREPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|189082317|sp|B1AIS5|SYH_UREP2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|11271791|pir||C82910 histidyl-tRNA synthetase UU285 [imported] - Ureaplasma urealyticum
 gi|6899258|gb|AAF30694.1|AE002125_5 histidyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827585|gb|ACA32847.1| histidyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902549|gb|EDT48838.1| histidyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675686|gb|EDT87591.1| histidyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700682|gb|EDU18964.1| histidyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 420

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 104/465 (22%), Positives = 184/465 (39%), Gaps = 50/465 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DR 65
           +    PRG  D   KE+     + + + +  + YGF  I+TP+ E+++   K   +  D 
Sbjct: 2   INYSKPRGTIDLYNKEMNDFKLLENFLLSTTKRYGFQQIKTPVFEFAELFMKSAGESSDL 61

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF--DTIVFPCRTYRIGPVFRNEKHGPG 123
            +K ++  +D   +W++LR + TA + R V EN        P +     P FR E+   G
Sbjct: 62  VSKEMYLFKDKSDRWLALRPEGTAGVIRAVVENKLLLNHPLPLKLMYFEPCFRYERPQAG 121

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF Q  V+ +G+     D E+  +    L+ + I      I   +      +  K  
Sbjct: 122 RQRQFHQFGVEVLGTKNIYYDFELIALADTILKKLMISNYILEINYISSPHNRSLWVKSL 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                     L  L      ++     +++L  +  +           L  +Q   +  F
Sbjct: 182 QEYFHLHRTELTPLS----QERITTNPLRILDDKLESQK---------LVVKQAPKISHF 228

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS + ++  + + +++                          + +  ++  +VRGL+YY+
Sbjct: 229 LSNEEKEEFNLIKKMLDDY-----------------------NIKYYVNEGLVRGLDYYS 265

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+E I   P      K +   ++ GGGRY  L+ +  G N    GF IGI RL++AL 
Sbjct: 266 GLVFEFISTSP------KLLGQSTIIGGGRYGELIKQTGGPNYEGIGFGIGIERLLIALS 319

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGSSKNFGNQLK 422
               +  N  +           D +  ++    TQ+LR    +  ++ L S+K      K
Sbjct: 320 ETNKNILNTDDDKY---LIAFFDKELENEAIKLTQILRINNQLNVDIILSSTKA-DKIFK 375

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            A R N    II    E S   + +KDL   K+    +   +  R
Sbjct: 376 LAQRLNVKKLIILAKKEWSDKKIILKDLLNFKQDLLSLDEIKGIR 420


>gi|167044607|gb|ABZ09280.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine crenarchaeote HF4000_APKG7F11]
          Length = 432

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 104/466 (22%), Positives = 198/466 (42%), Gaps = 45/466 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ELPRG  D  T E+     +  +  +  + +GFD IE   +E    L        R    
Sbjct: 2   ELPRGMKDFDTDEMIKIEFVRQTFLDTAKTFGFDLIEPSPIELLSVLEAKSGPSIRD--E 59

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D   + ++LR+D T  L RY A     +  P +    G V+R ++   GR+R F 
Sbjct: 60  IYQFKDKGDREVALRFDFTVGLTRYAAS-QKNLKLPAKFSSFGGVWRYDEPQKGRYRFFH 118

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q +++  G+     DAE+    +   + + ++  +  I IN+RK+++  +  I    +  
Sbjct: 119 QWNIETFGNLNTEHDAELIEFTSRFFDNLKLQ--NISIDINHRKLVESYINHIFESNETT 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           L   +   RA+DK+ K     +     +               + E+++ ++ F ++   
Sbjct: 177 LLHDIF--RAVDKIQKKSKDEILQEYKKK------------GYSPEKLEKILEFSNLKG- 221

Query: 250 KSMHELYELVKGTIAG------EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            +  E+ +    +I G         +NEL  +   ++  G   + I+I+  IVRGL+YYT
Sbjct: 222 -TPDEIEQSFDASIEGGGWRELLDSWNELCNLYRSLKNRGV--DNIRINFGIVRGLDYYT 278

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+EA                G++ GGGRYD L + F   ++ ATG + G+ R+I+ L 
Sbjct: 279 GIVFEAF---------DSTSDLGALVGGGRYDSLPNAFGRDDLGATGVAGGVERIILRLD 329

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
               S+    +     I+ +  + +  S        LR  GI   + L ++K+   Q++ 
Sbjct: 330 DQGISSIPPAD----TISVLYVNDELKSDAINCVSKLRKLGISTNIDL-TAKSLKKQMEM 384

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               N    +I    E S   + ++++    E    + +  +  + 
Sbjct: 385 --SANSKFCVIFAPKEFSEKQVVLRNMVDRTEKQISLDDLVTSPKD 428


>gi|154508885|ref|ZP_02044527.1| hypothetical protein ACTODO_01396 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798519|gb|EDN80939.1| hypothetical protein ACTODO_01396 [Actinomyces odontolyticus ATCC
           17982]
          Length = 450

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 128/493 (25%), Positives = 215/493 (43%), Gaps = 68/493 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +   +   I   +LD +R ++E +GF  IET  +E  + L          +K ++ 
Sbjct: 7   SGFPEWLPEGRIIEMHVLDELRRVFELHGFAGIETRAVETLEQLEAKGE----TSKEIYV 62

Query: 73  L----------------QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           L                +D     + L +DLT P ARYV EN + + FP + Y+I  V+R
Sbjct: 63  LERLQALKAAAAGARAPKDKG---MGLHFDLTVPFARYVVENANELDFPFKRYQIQKVWR 119

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            E+   GRFR+F Q D+D VG+       E+ + +        +      + +NNRK++ 
Sbjct: 120 GERPQDGRFREFTQADIDVVGNGELPFHFEVDLPLVMAEALNNLPIPHVRVLVNNRKVVQ 179

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ E +G+   +        LR +DK+DK G +GV   L              + +  EQ
Sbjct: 180 GVCESLGVTDVEAA------LRGLDKIDKIGPEGVAAELA------------QSGIDGEQ 221

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR-KSGYNSNRIKISSTI 295
             +++    I   +S      L    + GE     L  ++EL+   +      +     I
Sbjct: 222 ASVLLQMAQIRTSESSEVRARLADLGVGGELLDEGLKELTELLDTANKRMPGAVVADLKI 281

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
            RGL+YYTG VYE        +E +     GS+  GGRYD L    K    P  G SIG+
Sbjct: 282 ARGLDYYTGSVYE--------SEIEGHEALGSICSGGRYDSLAKDGKRT-YPGVGLSIGV 332

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           SRL+  + S      + K    V++  +  +    S+      +LR+ GI  ++   ++K
Sbjct: 333 SRLVSRMISAPMVRASRKVPTAVVVAVIAEEQRERSEA--IAAVLRSRGISTDVAPSAAK 390

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            FG Q+K+AD+R  P     G    +     +KD+  G+++     +  +W         
Sbjct: 391 -FGKQIKFADKRGIPFVWFPGEEGSAD---TVKDIRSGEQVD---ADPHTWV-------- 435

Query: 476 IPISELVSTVKKI 488
           +P ++ V T++K+
Sbjct: 436 LPEADAVPTIEKV 448


>gi|320334430|ref|YP_004171141.1| Histidyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755719|gb|ADV67476.1| Histidyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 428

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 103/477 (21%), Positives = 189/477 (39%), Gaps = 67/477 (14%)

Query: 7   LRAELPRGFADCPTKE---------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +  + P+G  D               R    ++   R + E  G   + TP+ E ++ + 
Sbjct: 1   MALQRPQGTNDLLPSGSPTLKAFSSARGHEHVIGVARGVLERAGAQFMATPMFEEAEVVK 60

Query: 58  KF-LPDEDRPNKGVFSLQDDDGQW-ISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPV 114
           +      D   K +F++          LR + TAP+ R   +N    +  P + +  G +
Sbjct: 61  RGVGGSTDIVRKEMFTVFYQGEHGGYVLRPEGTAPIVRAYIQNGLKQLPAPLKLWTTGAM 120

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGIN 170
           FR E++  GR+RQF Q D + +GS+    DAE   +M   +EA+G+     +        
Sbjct: 121 FRAERNQQGRYRQFHQVDYEVLGSTDPLVDAEAIALMVRVVEALGLTGVGVKLGSIGDPE 180

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           +R+  +  L ++     ++L        + D  D+     +++L  +   D        A
Sbjct: 181 DRERYNAYLRELFTPERERL--------SGDSQDRLDRNPMRILDSKSDEDQR----LIA 228

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            L    +  M++FL                    GE+      V+   +R  G      +
Sbjct: 229 GL---HVQPMLAFL--------------------GEEARAHFEVVQGYLRAWGVP---FE 262

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           +  +IVRGL+YY    +E                  ++GGGGRYDGL ++  G   P  G
Sbjct: 263 VDPSIVRGLDYYRRTAWEL--------HHAHIGAKSALGGGGRYDGLAAQLGGPETPGIG 314

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           ++ G+ RL++A++        I E     +     D++++         LR A    E  
Sbjct: 315 WAFGVERLLIAMEQEGLV---IPEPDGPALFLAAMDAENVPLVARVAMELR-ADAHVEFA 370

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
              +   G   K ADR+    A + G+ E + G+L++K LA G +    + +  ++ 
Sbjct: 371 Y-RAMKPGAAFKEADRKRARYAAVVGSNEAATGVLRVKALASGAQADVPLADLAAFL 426


>gi|289706220|ref|ZP_06502583.1| histidine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557059|gb|EFD50387.1| histidine--tRNA ligase [Micrococcus luteus SK58]
          Length = 458

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 130/496 (26%), Positives = 211/496 (42%), Gaps = 55/496 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K  L      GF +    E  +   +LD++R  +E +GF  IET  +E    L +  
Sbjct: 1   MSRKASL-----SGFHEWLPAERLVEQHVLDTLRRTFELHGFAGIETRAVETLGQLLRKG 55

Query: 61  PDEDRPNKGVFSL----QDDD---GQW----------ISLRYDLTAPLARYVAENFDTIV 103
                 +K V+++    +D++   G+           ++L +DLT P ARYV EN   + 
Sbjct: 56  E----VDKEVYAVSRLAEDEEVAAGRRDPRDPADPKRLALHFDLTVPFARYVVENAGHLA 111

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
           FP R Y++  V+R E+   GR R+F Q D+D VG  A +   +  + +        +   
Sbjct: 112 FPFRRYQMQKVWRGERPQEGRAREFTQADIDVVGDGALSPRYDADVALVMAEALGALPIG 171

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
           D+ I +NNRK+ +G    IGL           VLR+IDKL+K G + V  LL E      
Sbjct: 172 DFLIRVNNRKLAEGFYRGIGLED------TAGVLRSIDKLEKVGPEEVARLLQEE----- 220

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                GA+       + ++ +       +  +  L       E+G  EL  + + +    
Sbjct: 221 ----VGASPEQAAQALALADIRTSDASFVERVRALGVTHELLEEGLTELADVVDTL--HR 274

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
               R     +I RGL+YYTG VYE +L              GS+  GGRYD L S+   
Sbjct: 275 GAPGRAVADLSIARGLDYYTGTVYETVLVG--------HEQLGSICSGGRYDALASKGNR 326

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
                 G  + I    + ++ L           P  +       +  S+ Q    +LR  
Sbjct: 327 VFP---GVGLSIGVTRLVMRMLSQQMAVASRSVPTAVYVALTADEDWSEAQDVAALLRER 383

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           GI AE+ + S++ FG Q+KYADRR  P     G  +    + ++KD+  G++ + +  + 
Sbjct: 384 GIPAEVAV-SAEKFGKQIKYADRRGIPFVWFMGRDDAGARVHEVKDIRSGEQHAADPADW 442

Query: 464 ESWREARVAQITIPIS 479
               E  + Q+     
Sbjct: 443 TPPAEDLLPQVARAQD 458


>gi|26553740|ref|NP_757674.1| histidyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|32130109|sp|Q8EWB8|SYH_MYCPE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|26453747|dbj|BAC44078.1| histidyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 426

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 109/495 (22%), Positives = 201/495 (40%), Gaps = 77/495 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  + PRG  D   +EI + N+I D ++ I   Y    I+TP+ E+ +   + + +  D 
Sbjct: 1   MVIKKPRGTYDLFGEEIEVFNKINDVLKTISNTYNCHEIKTPIFEHKELYIRNIGESSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
             K  +  +D   + ++LR + T  + R V EN    T  FP + Y +GP+FR E+   G
Sbjct: 61  VTKEFYDFKDKSDRELALRPENTVGVIRSVVENKLLYTNPFPLKFYYLGPMFRYERPQSG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN----DYHIGINNRKILDGIL 179
           R RQF Q  ++ +G      + E  +   D L+ + I       +Y   I  R+     L
Sbjct: 121 RNRQFYQFGIEFIGVKNILNEIEGILFALDILKKLNITNWKLKVNYIGSIETREKWINSL 180

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +K      D+L+E        D  ++     +++L  + + D S  F K           
Sbjct: 181 KKYFNKYKDELSE--------DSKNRIEKNPLRIL--DDKVDGSKSFVKSC-------PK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  FL+ + ++      + +K  +                       N  +  ST+VRGL
Sbjct: 224 IEEFLTKEEKEESDNFIKCLKTIV-----------------------NEFEFDSTLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY+G V+E +      ++  K     ++ GGGRY  L       +    GF++G+ RL+
Sbjct: 261 DYYSGPVFEIV------SQSNKLTGQSTIIGGGRYTKLTKELGDNDYICFGFALGMERLM 314

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDS-DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +A +      +N      V +      S +S      +   LR    R E+     K   
Sbjct: 315 LAYRDENQFLSNNS----VDVYIASIGSVESELVAMNFANQLRNLNYRVEVNFDL-KKID 369

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            Q K +++ N  + +I G  +     + +K+     + + E K              I +
Sbjct: 370 KQFKNSNKYNPKIILIYGDEDHKNKQVTLKN-----QKTLENK-------------VIKL 411

Query: 479 SELVSTVKKILQENK 493
           +EL + +K+  + +K
Sbjct: 412 NELNNKIKEFFESDK 426


>gi|149185457|ref|ZP_01863773.1| Histidyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148830677|gb|EDL49112.1| Histidyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 410

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 92/435 (21%), Positives = 163/435 (37%), Gaps = 53/435 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +      +L++   + + Y F   E P+ E ++   + +
Sbjct: 1   MAK----TPQAIRGTQDIFGADAEAFAFVLETFERVRKLYRFRRAEMPVFEKTEVFARSI 56

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K ++S +D  G+ ++LR + TA +AR    N      P +    GP+FR E+
Sbjct: 57  GETTDIVSKEMYSFEDRGGESLTLRPEFTAGIARAFMSNGWQQHAPLKLATHGPLFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q D + +G++   AD E+  M    L+ +GIK    H+            
Sbjct: 117 PQKGRYRQFHQIDAEILGAAEPQADVELLAMADQLLKELGIKGVTLHLNTLGDGDSREAW 176

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +     +   L    + D  ++     +++L  + R D                  
Sbjct: 177 RAALVDHFRAVKSEL----SEDSQERLEKNPLRILDSKDRRDQKF---------VADAPK 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  FLS D       +   +                            +   + ++VRGL
Sbjct: 224 IDQFLSDDARAFFDAVTSGLDAA-----------------------GVKWTRAESLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY    +E  +         K     ++ GGGRYDGL+    G   PA G++ GI RL 
Sbjct: 261 DYYRHTAFE-FIPDEGSEAASKLGSQSTILGGGRYDGLMESLGGAPTPAVGWAAGIERLA 319

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + +          K      +  +  D D +++     +  R+ G  AEM   S  +   
Sbjct: 320 MLVGE--------KSDPASDLIVVVEDDDRIAEAFGVLKRARSEGFTAEMI--SGGSPRK 369

Query: 420 QLKYADRRNCPLAII 434
           +   A +R  P  I+
Sbjct: 370 RYDKAVKR-APKVIL 383


>gi|224068277|ref|XP_002191168.1| PREDICTED: histidyl-tRNA synthetase [Taeniopygia guttata]
          Length = 731

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 178/389 (45%), Gaps = 26/389 (6%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   KE+ IR R   +I + ++ +G + I+TP+ E  ++L     ++
Sbjct: 97  KHKFVLKTPKGTRDFGPKEMAIRERAFKAIISCFKRHGAEVIDTPVFELKETLTGKYGED 156

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 157 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPAMTRG 212

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G          C+ +   + +  ++  D+ I +N+R+ILDG+    G
Sbjct: 213 RYREFYQCDFDIAGQFDPMIPDAECLKIVHEILS-DLQLGDFVIKVNDRRILDGMFAVCG 271

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + V+            +      L+ E  D +  +
Sbjct: 272 VPDS----KFRTICSSVDKLDKVPWEEVR-----------SEMVGEKGLSPEAADRIGEY 316

Query: 244 LSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +     + E       +      ++G  ++ ++ E +   G    +I    ++ RGL+
Sbjct: 317 VQLHGGLDLIEQLLQDPKLSQNKVAKEGLGDMKLLFEYLTLFGIT-GKISFDLSLARGLD 375

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRL 358
           YYTG ++EA+L        ++PV  GSV GGGRYDGL  +   KG+ VP  G SIGI R+
Sbjct: 376 YYTGVIFEAVLLQQENEHVEEPVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERI 435

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDS 387
              L+      +     G   +  +    
Sbjct: 436 FSILEQRLEVNDRRILDGMFAVCGVPDSK 464



 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 79/343 (23%), Positives = 140/343 (40%), Gaps = 23/343 (6%)

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
            D +    +    ++  +             +  + +N+R+ILDG+    G+       +
Sbjct: 409 YDGLVGMFDPKGRKVPCVGVSIGIERIFSILEQRLEVNDRRILDGMFAVCGVPDS----K 464

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              +  ++DKLDK    G    LG          T+   + +  +D++   L        
Sbjct: 465 FRTICSSVDKLDKGTHPG---WLGPPCRVLLPWHTEAWLVPTGGLDLIEQLLQD------ 515

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                 +      ++G  ++ ++ E +   G    +I    ++ RGL+YYTG ++EA+L 
Sbjct: 516 ----PKLSQNKVAKEGLGDMKLLFEYLTLFGIT-GKISFDLSLARGLDYYTGVIFEAVLL 570

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                  ++PV  GSV GGGRYDGL  +   KG+ VP  G SIGI R+   L+       
Sbjct: 571 QQENEHVEEPVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSILEQRLEVGI 630

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +         L +       L  AGI+AEM    +    NQL+Y +    P
Sbjct: 631 ---RTTETQVLVASAQKKLLEERLKLISELWDAGIKAEMLYKKNPKLLNQLQYCEETGIP 687

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           L  I G  E   G+++++ +A  +E++   ++       R +Q
Sbjct: 688 LVAIVGEQELKDGVVKLRIVATREEVNVRRESLVEEIRIRTSQ 730


>gi|15616899|ref|NP_240112.1| histidyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219682210|ref|YP_002468594.1| histidyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|11134951|sp|P57375|SYH_BUCAI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|25293363|pir||F84963 histidine-tRNA ligase (EC 6.1.1.21) [imported] - Buchnera sp.
           (strain APS)
 gi|10038963|dbj|BAB12998.1| histidyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621943|gb|ACL30099.1| histidyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311086025|gb|ADP66107.1| histidyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086599|gb|ADP66680.1| histidyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087182|gb|ADP67262.1| histidyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 423

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 102/463 (22%), Positives = 185/463 (39%), Gaps = 65/463 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D   K+++I N I    + +  +Y +  I  P+LE ++   + +
Sbjct: 1   MNKE----IKSIRGMYDYFPKDLKIWNYIEIIFKEVLNSYCYLEIRLPILEKTEIFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K ++S  D  G  ++LR + T    R + +N   +    + + +GP+FR E+
Sbjct: 57  GNVTDVVEKEMYSFNDRKGNNLTLRPEGTVGCVRAIIQNNL-LQKSNKFWYLGPMFRYER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q   +  G   E  D E+ ++     + +GI   D  I +    I   I 
Sbjct: 116 PQKGRYRQFYQLGAEVFGLDTEDIDLEIIILTNRLWKRIGI---DSFITLEVNSIGSKID 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       ++   L   D   +     +++L  + +  +  +  K A L SE I  
Sbjct: 173 RVQYKKELVNFLKKREYLLDEDCKRRLYTNPLRILDSKNQ--DIQNLLKEAPLLSEYI-- 228

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                                        F+E      L     ++  + K +  +VRGL
Sbjct: 229 ----------------------------SFSENNHFKNLCNMMNHHGIKYKCNPHLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E         +  K     ++  GGRYD LV    G+  PA GF+IGI RL+
Sbjct: 261 DYYNSTVFEW--------KSNKLGAQNTICAGGRYDSLVQEMGGRKTPAIGFAIGIERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS----- 414
           + +KSL+  +  I+E     +  +    ++       ++ +R      +++         
Sbjct: 313 LLVKSLKIFSEVIEES---NVYIIFIGDNNKCHAINLSEEIR------DLYPKLRIFINF 363

Query: 415 --KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             +N   ++K A      + I+ G  E  +G   +KDL + KE
Sbjct: 364 LHQNLTKKIKNAISSLARIIILIGDNEIKKGFFLVKDLKEKKE 406


>gi|15892335|ref|NP_360049.1| histidyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|15619480|gb|AAL02950.1| histidyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 439

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 86/475 (18%), Positives = 178/475 (37%), Gaps = 65/475 (13%)

Query: 2   GKKTKL--RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            K  ++  + +  RG  D    + ++ + I++  R++   YG+  + TP++EY+    + 
Sbjct: 21  NKINQMTEKLQPLRGMKDLLPDDYKVHDYIINKARDVGVLYGYKQMSTPIVEYTKVFNRS 80

Query: 60  LPDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           + +  D  +K ++S  D    +++LR + TA + R +  N      P + +  GPVFR +
Sbjct: 81  MGESSDVISKEIYSFLDKSNDFVALRPEFTACIIRSLISNRLQHKLPLKFFSTGPVFRYD 140

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRK 173
           +   GR RQF Q + + +G+     DA+   +  D L+A+ I+++     +      +R 
Sbjct: 141 RPQAGRQRQFHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRS 200

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +    L +      D+L+E        +   +     +++L  +  TD            
Sbjct: 201 VYQQKLVEYLNDFKDQLSE--------ESKIRLSKNPMRILDSKSETDQK---------I 243

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                ++  + + +                  ++ F EL+   +++        +  I+ 
Sbjct: 244 IANAPVLSEYYTDES-----------------KEYFEELIQYLDIL------GVKYSINP 280

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY    +E            K     ++  GGRYDGL       +        
Sbjct: 281 RLVRGLDYYCHTAFEFTTK--------KLGSQSTILAGGRYDGLAKIMGNNDDVPAIGFA 332

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                I  ++    S           +  +    +++         LRT  I   +   S
Sbjct: 333 AGIERIALMREYNISEVK-------PVFVLPIGKNNICYALEIVDKLRTENIAIII--ES 383

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                 +++     N    I  G  E++   L+IKDL K +E   +        +
Sbjct: 384 LGKIAKRMQRIFNENAQFIIFIGDEEQANNNLKIKDLKKAEEYIVDFAKALELLK 438


>gi|219681653|ref|YP_002468039.1| histidyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471342|ref|ZP_05635341.1| histidyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219624496|gb|ACL30651.1| histidyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 423

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 102/463 (22%), Positives = 185/463 (39%), Gaps = 65/463 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+     +  RG  D   K+++I N I    + +  +Y +  I  P+LE ++   + +
Sbjct: 1   MNKE----IKSIRGMYDYFPKDLKIWNYIEIIFKEVLNSYCYLEIRLPILEKTEIFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K ++S  D  G  ++LR + T    R + +N   +    + + +GP+FR E+
Sbjct: 57  GNVTDVVEKEMYSFNDRKGNNLTLRPEGTVGCVRAIIQNNL-LQKSNKFWYLGPMFRYER 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q   +  G   E  D E+ ++     + +GI   D  I +    I   I 
Sbjct: 116 PQKGRYRQFYQLGAEVFGLETEDIDLEIIILTNRLWKRIGI---DSFITLEVNSIGSKID 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                       ++   L   D   +     +++L  + +  +  +  K A L SE I  
Sbjct: 173 RVQYKKELVNFLKKREYLLDEDCKRRLYTNPLRILDSKNQ--DIQNLLKEAPLLSEYI-- 228

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                                        F+E      L     ++  + K +  +VRGL
Sbjct: 229 ----------------------------SFSENNHFKNLCNMMNHHGIKYKCNPHLVRGL 260

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   V+E         +  K     ++  GGRYD LV    G+  PA GF+IGI RL+
Sbjct: 261 DYYNSTVFEW--------KSNKLGAQNTICAGGRYDSLVQEMGGRKTPAIGFAIGIERLV 312

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS----- 414
           + +KSL+  +  I+E     +  +    ++       ++ +R      +++         
Sbjct: 313 LLVKSLKIFSEVIEES---NVYIIFIGDNNKCHAINLSEEIR------DLYPKLRIFINF 363

Query: 415 --KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             +N   ++K A      + I+ G  E  +G   +KDL + KE
Sbjct: 364 LHQNLTKKIKNAISSLARIIILIGDNEIKKGFFLVKDLKEKKE 406


>gi|320102024|ref|YP_004177615.1| histidyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319749306|gb|ADV61066.1| histidyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 476

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 145/494 (29%), Positives = 220/494 (44%), Gaps = 43/494 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   +  G  D P      R  +    R ++   GF PIETP +E  + L       +  
Sbjct: 2   IDPRVASGLRDLPPSLAIPREHLATVFRGVFARAGFVPIETPHIERLEVLTGKGAGSEEV 61

Query: 67  NKGVFSLQDDDGQ--WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            + +F + +  G+   ++LR+DLT PLAR++A++ DT+  P + Y IG VFR E+   GR
Sbjct: 62  LRQIFDVTNKGGKPGELALRFDLTVPLARFIAKHVDTVGVPFKRYAIGSVFRGERPAKGR 121

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           FR+F QCDVD VG     ADAE  + + D L+A GI    + I +N+R ILDG+LE +G 
Sbjct: 122 FREFTQCDVDIVGVDGPLADAEAVLAIHDALKAAGIPP--FRIKLNHRAILDGLLETLGA 179

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG------EGRTDNSGDFTKGAN------- 231
                      VLR++DKLDK G   V   L       EG+ ++                
Sbjct: 180 SERLPA-----VLRSLDKLDKIGRDKVIEELTGVRRRPEGQGESDAAAPCSPPEETECEP 234

Query: 232 -LTSEQIDIMVSFLSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
            LT EQ   +++F            + ++            G   L  + EL +  G + 
Sbjct: 235 VLTPEQAARVLNFAEKGRGGLEVLDLAKIDPEAAAHPKAIAGVERLRQVVELAQAGGADP 294

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
            RI +   + RGL+YYTG + E ++             FGSV  GGRYD L   F  + +
Sbjct: 295 ERIGVDLGLARGLDYYTGIILETVVLGWER--------FGSVASGGRYDNLAGLFTSRRL 346

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG+ RL+  L+    +      + PVL+T       ++         LR  G+ 
Sbjct: 347 PGVGASIGLDRLLALLEEAG-TLETRGTIAPVLVTWFPGVPGAVP--LGLAARLRAVGVG 403

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE++       G Q+ Y  +R   L +I G  E +  +  ++DLA   E    +K     
Sbjct: 404 AEVYP-EPIAVGKQMGYGSQRGHRLGLIVGPDEVAARVFNLRDLASRDE----LKAIPWD 458

Query: 467 REARVAQITIPISE 480
           R     Q  + +SE
Sbjct: 459 RLESTIQHRLNLSE 472


>gi|167043912|gb|ABZ08600.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine crenarchaeote HF4000_APKG3H9]
          Length = 432

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 103/466 (22%), Positives = 198/466 (42%), Gaps = 45/466 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ELPRG  D  T E+     +  +  +  + +GFD IE   +E    L        R    
Sbjct: 2   ELPRGMKDFDTDEMIKIEFVRQTFLDTAKTFGFDLIEPSPIELLSVLEAKSGPSIRD--E 59

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D   + ++LR+D T  L RY A     +  P +    G V+R ++   GR+R F 
Sbjct: 60  IYQFKDKGDREVALRFDFTVGLTRYAAS-QKNLKLPAKFSSFGGVWRYDEPQKGRYRFFH 118

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q +++  G+     DAE+    +   + + ++  +  I IN+RK+++  +  +    +  
Sbjct: 119 QWNIETFGNLNTEHDAELIEFTSRFFDNLKLQ--NISIDINHRKLVESYINHVFESNETT 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           L   +   RA+DK+ K     +     +               + E+++ ++ F ++   
Sbjct: 177 LLHDIF--RAVDKIQKKSKDEILQEYKKK------------GYSPEKLEKILEFSNLKG- 221

Query: 250 KSMHELYELVKGTIAG------EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            +  E+ +    +I G         +NEL  +   ++  G   + I+I+  IVRGL+YYT
Sbjct: 222 -TPDEIEQSFDASIEGGGWRELLDSWNELCNLYRSLKNRGV--DNIRINFGIVRGLDYYT 278

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+EA                G++ GGGRYD L + F   ++ ATG + G+ R+I+ L 
Sbjct: 279 GIVFEAF---------DSTSDLGALVGGGRYDSLPNAFGRDDLGATGVAGGVERIILRLD 329

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
               S+    +     I+ +  + +  S        LR  GI   + L ++K+   Q++ 
Sbjct: 330 DQGISSIPPAD----TISVLYVNDELKSDAINCVSKLRKLGISTNIDL-TAKSLKKQMEM 384

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               N    +I    E S   + ++++    E    + +  +  + 
Sbjct: 385 --SANSKFCVIFAPKEFSEKQVVLRNMVDRTEKQISLDDLVTSPKD 428


>gi|291457464|ref|ZP_06596854.1| histidine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381299|gb|EFE88817.1| histidine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 487

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 131/481 (27%), Positives = 206/481 (42%), Gaps = 44/481 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            GF +    E  +  R++D++R ++E  GF  IET  +E   SL K        +K ++ 
Sbjct: 32  SGFPEWLPSERVVEQRVIDTLRKVFELNGFIGIETRAVETGASLLKKGE----TSKEIYL 87

Query: 72  --SLQDDD-------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
              LQ+            + L +DLT PL+RYV E+   + FP + ++I  V+R E+   
Sbjct: 88  LSRLQEVGHESDTPIEDRLGLHFDLTVPLSRYVVEHSGALTFPFKRWQIQKVWRGERPQE 147

Query: 123 GRFRQFIQCDVDNV--GSSAETADAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGIL 179
           GRFR+F+Q D+D +  G   +  + E+ ++M   LE +         +  NNRK+ +G  
Sbjct: 148 GRFREFVQADIDVIGAGDLPDHYEVELPLVMVSALEELRAYGLPKATVHANNRKLSEGFY 207

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +GL   +       VLR IDKLDK G   V  LL E              L       
Sbjct: 208 RGLGLTDIE------GVLREIDKLDKIGADEVARLLSETCGATEAQARACLELAELTASD 261

Query: 240 MVSF-LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                   D     H + E  +      +G + L +I +    +      +     I RG
Sbjct: 262 GAELAAKFDALCEAHGIAEDSEAYELARQGLDTLAMIVD--EAAAIRPGSVIADLKIARG 319

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG VYE  L              GS+  GGRYD L S+   +  P  G SIG+SRL
Sbjct: 320 LDYYTGSVYETFLDGAA--------SLGSICSGGRYDNLASQ-GNRKYPGVGLSIGLSRL 370

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +  +     +  N      VL+   + +             LR  GI  ++   ++K  G
Sbjct: 371 VSYMLHTAGAHANRVSPAAVLVAVWNEED--RPTANRIAAQLRARGIATDVAPTAAK-LG 427

Query: 419 NQLKYADRRNCPLAII---QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            Q+KYAD+   P          GE S G  ++K++  G++++ +  + E   +  VAQ T
Sbjct: 428 KQIKYADKLGIPYVWFPASAAEGEESTGD-EVKNIVTGEQVAADCTSWEP--DTVVAQQT 484

Query: 476 I 476
           +
Sbjct: 485 V 485


>gi|126179531|ref|YP_001047496.1| histidyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166228583|sp|A3CVW4|SYH_METMJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|125862325|gb|ABN57514.1| histidyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 410

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 98/454 (21%), Positives = 172/454 (37%), Gaps = 56/454 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D    E+  R  I   +R+    +G+  + TP  E+ +       +     +
Sbjct: 2   LQKPRGTRDFLPDEMERRRLIERRMRDAARRWGYREVCTPDFEHLELFTMKSGEGII--Q 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D  G+ ++LR ++TA + R        +  P R       FR E+   GR+RQF
Sbjct: 60  EMYVFEDKGGRKMTLRPEVTAAVLRMYVNEGKVLPKPLRWCYFADCFRYERPQKGRYRQF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G+   +ADAE+ M+  DTL + G+  + +   +   K L             
Sbjct: 120 WQFGVELIGADTASADAEVIMLADDTLRSTGVTFDLHVGHLAPMKHLLS----------- 168

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                         LD    + +   L +           G NLT    + + +      
Sbjct: 169 -------------GLDPGDQRAIMAYLDKHDQKGLEAVLFGKNLT-HLAEPLAALGECRT 214

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              + E+   V      E+ F  L                 +    I RGL+YYTG V+E
Sbjct: 215 VSEVFEVAGDVPERARIEETFTLLESQ----------EIDYRPDFGIARGLDYYTGMVFE 264

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                      +       + GGG Y  L   F G +V + GF+IG  R++V++   E  
Sbjct: 265 GF--------AKNLGAENQILGGGTY-RLAHLFGGDDVASCGFAIGFDRVMVSIGDFEL- 314

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                      +  +    +  ++     +  R AG+RAE  L   +  G Q+ +A +  
Sbjct: 315 -------AHEPVVGVVCTPEGRARALEVARAFREAGVRAEADL-MQRGMGAQVSHAAKT- 365

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              A + G  E   G + +K+L  G++  R ++ 
Sbjct: 366 ADFAAVLGKREVEAGTVTLKNLHSGEQQERSLEE 399


>gi|119025593|ref|YP_909438.1| histidyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118765177|dbj|BAF39356.1| histidyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 463

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 134/494 (27%), Positives = 212/494 (42%), Gaps = 47/494 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +      GF +    E  +  R++D++RN++E  GF  IET  +E   SL K  
Sbjct: 1   MAKGASI-----SGFPEWLPSERVVEQRVIDTLRNVFELNGFIGIETRAVEQGSSLLKKG 55

Query: 61  PDEDRPNKGVF---SLQDDD-------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
                 +K ++    LQ+            + L +DLT PL+RYV E+   + FP + ++
Sbjct: 56  E----TSKEIYLLSRLQEVGHESDTPIEDRLGLHFDLTVPLSRYVVEHSGDLAFPFKRWQ 111

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSS--AETADAEMCMMMADTLEAVGIKR-NDYHI 167
           I  V+R E+   GRFR+F+Q D+D +G+    +  + E+ ++M   LE +         +
Sbjct: 112 IQKVWRGERPQEGRFREFVQADIDVIGNGDLPDHYEVELPLVMVSALERLREFGLPKATV 171

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR-TDNSGDF 226
             NNRK+ +G    +GL   +       VLR IDKLDK G   V  LL EG   D +   
Sbjct: 172 HANNRKLSEGFYRGLGLTDIE------GVLREIDKLDKIGADEVAKLLVEGCGADEAQAR 225

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
                      D        D   + H++       +   +G + L +I +    +    
Sbjct: 226 ACLELAELTAADGKELSDKFDALCAKHDIASDSDAYVLARQGLDTLAMIVD--EAARIRP 283

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             +     I RGL+YYTG VYE  L              GS+  GGRYD L S+   +  
Sbjct: 284 GSVIADLKIARGLDYYTGSVYETFLDGAA--------ALGSICSGGRYDNLASQ-GNKKY 334

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG+SRL+  +     +  N      VL+   +      S   +    LR+ GI 
Sbjct: 335 PGVGLSIGLSRLVSYMLHTAGAHANRVSPASVLVAVWNEAD--RSASNLIANQLRSRGIA 392

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A++   ++K  G Q+KYAD+   P               ++K++  G +      + +SW
Sbjct: 393 ADVAPTAAK-LGKQIKYADKLGIPYVWFPADASEEGAQDEVKNIITGDQ---RPADAQSW 448

Query: 467 REARV-AQITIPIS 479
               V AQ T+ + 
Sbjct: 449 EPDTVYAQQTVTVE 462


>gi|295110970|emb|CBL27720.1| histidyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 390

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 75/390 (19%), Positives = 142/390 (36%), Gaps = 49/390 (12%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-E 63
             +  + PRG  D   +E      ++++      ++GF  +  PL E ++   + + D  
Sbjct: 21  NAMEIKAPRGVRDILPEESWKWAYVVNTAARTMADFGFSEVHLPLFEQTELFARGVGDTT 80

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGP 122
           D   K +++  D  G+ ++LR + TA + R   EN         + +  GP+FR E+   
Sbjct: 81  DIVEKEMYTFTDRGGRSLTLRPEGTASMVRAAVENGLCAQGTAAKLWCWGPMFRYERPQK 140

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+RQF Q D + +G +   AD E   + A+    +G+K  +  I          +  + 
Sbjct: 141 GRYRQFYQIDAEYLGVAGPMADVETIDLSAELFRRLGMKNLEVVINSVGCPRCRPVYREA 200

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            L    +  +          L++     +++L  +           G    ++    +  
Sbjct: 201 LL----QHFQARRGELCETCLERMDRNPLRILDCKE---------PGCGTVADAAPAIYE 247

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L  +      E+   ++                         S R ++   +VRGL+YY
Sbjct: 248 SLCDECRSHFEEVRSGLE-----------------------RLSFRYRLDKRLVRGLDYY 284

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T   YE +                +V GGGRYD L     G  +P  GF+ G+ R+++ +
Sbjct: 285 TKTAYEIL--------SGDLGAQNAVCGGGRYDNLSEAIGGPRLPGVGFACGLDRIVLVM 336

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +                      D  S  +
Sbjct: 337 EQQG---CTFGRRPQARAYVAALDGASRGR 363


>gi|293192661|ref|ZP_06609615.1| histidine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292820168|gb|EFF79165.1| histidine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 450

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 128/493 (25%), Positives = 215/493 (43%), Gaps = 68/493 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +   +   I   +LD +R ++E +GF  IET  +E  + L          +K ++ 
Sbjct: 7   SGFPEWLPEGRIIEMHVLDELRRVFELHGFAGIETRAVETLEQLEAKGE----TSKEIYV 62

Query: 73  L----------------QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           L                +D     + L +DLT P ARYV EN + + FP + Y+I  V+R
Sbjct: 63  LERLQALKAAAAGARAPKDKG---MGLHFDLTVPFARYVVENANELDFPFKRYQIQKVWR 119

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            E+   GRFR+F Q D+D VG+       E+ + +        +      + +NNRK++ 
Sbjct: 120 GERPQDGRFREFTQADIDVVGNGELPFHFEVDLPLVMAEALNNLPIPHVRVLVNNRKVVQ 179

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+ E +G+   +        LR +DK+DK G +GV   L              + +  +Q
Sbjct: 180 GVCESLGVTDVEAA------LRGLDKIDKIGPEGVAAELA------------QSGIDGDQ 221

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR-KSGYNSNRIKISSTI 295
             +++    I   +S      L    + GE     L  ++EL+   +      +     I
Sbjct: 222 ASVLLQMAQIRTSESSEVRARLADLGVGGELLDEGLKELTELLDTANKRMPGAVVADLKI 281

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
            RGL+YYTG VYE        +E +     GS+  GGRYD L    K    P  G SIG+
Sbjct: 282 ARGLDYYTGSVYE--------SEIEGHEALGSICSGGRYDSLAKDGKRT-YPGVGLSIGV 332

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           SRL+  + S      + K    V++  +  D    S+      +LR+ GI  ++   ++K
Sbjct: 333 SRLVSRMISAPMVRASRKVPTAVVVAVIAEDQRERSEA--IAAVLRSRGISTDVAPSAAK 390

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            FG Q+K+AD+R  P     G    +     +KD+  G+++     +  +W         
Sbjct: 391 -FGKQIKFADKRGIPFIWFPGEEGSAD---TVKDIRSGEQVD---ADPHTWV-------- 435

Query: 476 IPISELVSTVKKI 488
           +P ++ V T++K+
Sbjct: 436 LPEADAVPTIEKV 448


>gi|305662506|ref|YP_003858794.1| histidyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304377075|gb|ADM26914.1| histidyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 429

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 100/460 (21%), Positives = 197/460 (42%), Gaps = 39/460 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  RGF D    +  I   I DS + I + +G+  I+TP LE          +E R + 
Sbjct: 5   IEPLRGFRDYIPPDSDIITWICDSFKIIVKRFGYKEIKTPTLENFKLFALKSGEEIRES- 63

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F  +D   + ++LR ++T  + R        I  P R + I  VFR ++   GR+R+F
Sbjct: 64  -MFVFKDKAEREVALRPEVTPSVIRVYLRELRNIPKPLRLFYIANVFRYDEPQFGRYREF 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G+     D E+  ++ +  +++GIK  +    +NN  I   + ++  L+ D+
Sbjct: 123 TQAGVEILGADGLNYDVELIEILEEFYDSIGIK--ERMYKVNNVAIFRELAKRARLNEDE 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                  + R    LDK     V  +  E                      ++ +L  + 
Sbjct: 181 -------IERMFHFLDKGRFNDVINIFKEKGAVKEAQ--------------VIEYLYRER 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++ +  +  +++G    ++    +  +   +        +I +     RG+ YYTG ++E
Sbjct: 220 QRDITAIINMLEGYNEYKEIQKHVETLMRYIDMGKAIGAKIYVDPAFARGIAYYTGIIFE 279

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            ++    ++          + GGGRYD L + + G+ + +TGF+IG+ R  +AL++   +
Sbjct: 280 VMVPNMSIS----------IAGGGRYDNLTTVYGGEELSSTGFAIGVERTFLALRN---N 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGSSKNFGNQLKYADRR 427
                     L+  + +D +  +K     +MLR  GI  +   L S++     L+YA ++
Sbjct: 327 IEIDLGYPKTLVLLLSNDIEGFTKMYNVVKMLRRQGISIQFEVLESAQRLSRWLEYASKQ 386

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
                II G  E  + ++ I+D+ K  +    +     + 
Sbjct: 387 GFNYVIIVGRKEMEKNVVVIRDMKKWTQEEVPLDMLREFL 426


>gi|229817225|ref|ZP_04447507.1| hypothetical protein BIFANG_02485 [Bifidobacterium angulatum DSM
           20098]
 gi|229785014|gb|EEP21128.1| hypothetical protein BIFANG_02485 [Bifidobacterium angulatum DSM
           20098]
          Length = 471

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 131/482 (27%), Positives = 208/482 (43%), Gaps = 45/482 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            GF +    E  +  R++D++R ++E  GF  IET  +E   SL K        +K ++ 
Sbjct: 20  SGFPEWLPSERVVEQRVIDTLREVFELNGFLGIETRAVETGASLLKKGE----TSKEIYL 75

Query: 72  --SLQDDDGQW-------ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
              LQD   +        + L +DLT PL+RYV E+   + FP + ++I  V+R E+   
Sbjct: 76  LSRLQDVGNESDTPIEERLGLHFDLTVPLSRYVVEHSGDLAFPFKRWQIQKVWRGERPQE 135

Query: 123 GRFRQFIQCDVDNVGSS--AETADAEMCMMMADTLEAVGIKR-NDYHIGINNRKILDGIL 179
           GRFR+F+Q D+D +G+    +  + E+ ++M   LE +         +  NNRK+ +G  
Sbjct: 136 GRFREFVQADIDVIGNGDLPDHYEVELPLVMVSALERLREFGLPKATVHANNRKLSEGFY 195

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +GL   +       VLR IDKLDK G   V  LL E              L       
Sbjct: 196 RGLGLDDIE------GVLREIDKLDKIGADEVAKLLVETCGATDAQARACLELAELTAAN 249

Query: 240 MVSFL-SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                   D   + H + +  +      +G N L +I +  + +      +     I RG
Sbjct: 250 GAELAEKFDELAAKHGISQESEAYALAREGLNTLGMIVD--QAAAIRPGSVIADLKIARG 307

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG VYE  L              GS+  GGRYD L S+   +  P  G SIG+SRL
Sbjct: 308 LDYYTGSVYETFLDGAA--------SLGSICSGGRYDNLASQ-GNRKYPGVGLSIGLSRL 358

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +  +     +  N      VL+   +      ++       LR+ GI A++   ++K  G
Sbjct: 359 VSYMLHTAGAHANRVSPASVLVAVWNESE--RAESNAIANALRSRGIAADVAPTAAK-LG 415

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV-AQITIP 477
            Q+KYAD+   P     G         ++K++  G++      +  SW    V A+ T+ 
Sbjct: 416 KQIKYADKLGIPFVWFPGQEGAGD---EVKNIVSGEQ---RPADRTSWEPDTVNARQTVV 469

Query: 478 IS 479
           I 
Sbjct: 470 ID 471


>gi|157803965|ref|YP_001492514.1| histidyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166228606|sp|A8EZE6|SYH_RICCK RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|157785228|gb|ABV73729.1| hypothetical protein A1E_04010 [Rickettsia canadensis str. McKiel]
          Length = 415

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 81/462 (17%), Positives = 172/462 (37%), Gaps = 53/462 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    + ++ + I++  R++   YG+  + TP+LEY+    + + +  D  
Sbjct: 4   KLQPLRGMKDLLPDDYKVHDYIINKARDVGVLYGYKQMSTPILEYTKVFNRSMGESSDII 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D   + ++LR + TA + R    N      P + +  GP+FR ++   GR R
Sbjct: 64  SKEIYSFLDKSNESVALRPEFTAGIIRSFISNNLRHKLPLKFFSTGPIFRYDRPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + + +G+     DAE   +  D L+A+ I+++               L  +G   
Sbjct: 124 QFHQLNYEYIGAKGAMTDAETLKLAVDILKALEIEQDTTLE-----------LNSLGCSE 172

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
              + ++ +V    D  ++   +  ++ L +          +          I+  + + 
Sbjct: 173 SRSVYQQKLVEYLNDFKNQLSEES-RVRLIKNPMRILDSKNEIDQKIVAAAPILSEYYTD 231

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +                  ++ F +L+    ++        + +I+  +VRGL+YY    
Sbjct: 232 ES-----------------KEYFEDLIKYLNIL------GVKYRINPRLVRGLDYYCHTA 268

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E            K     ++  GGRYDGL       +             I  ++   
Sbjct: 269 FEFTTL--------KLGTQSTILAGGRYDGLAKIMGNNDDMPAIGFAAGIERIALMREYN 320

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            S  ++  + P+         +++         LRT  I   +          +++    
Sbjct: 321 VSLLSLVVVLPI-------GKNNICYALEIVDKLRTKNIATIIEPTG--KIAKRMQRVLN 371

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            N    I  G  E++   L++KDL   +E   +        +
Sbjct: 372 ENAKFIIFIGDEEQANNNLKLKDLETQEEYILDFAKTLELLK 413


>gi|239947875|ref|ZP_04699628.1| histidyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922151|gb|EER22175.1| histidyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 415

 Score =  188 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 86/467 (18%), Positives = 172/467 (36%), Gaps = 63/467 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    + ++ + I++  R++   YG+  + TP+LEY+    + + +  D  
Sbjct: 4   KLQPLRGLKDLLPDDYKVHDYIINKARDVGVLYGYKQMSTPILEYTKVFNRSMGESSDVI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D     ++LR + TA + R +  N        + +  GPVFR ++   GR R
Sbjct: 64  SKEIYSFLDKSNDSVALRPEFTAGIIRSLISNGLQHKLQLKFFSTGPVFRYDRPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q + + +G+     DAE   +  D L+A+ I+++     +      +R +    L +
Sbjct: 124 QFHQLNYEYIGAKGAITDAETSKLAVDILKALEIEQDTTLELNSLGCSESRSVYQQKLVE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        +   +     +++L  +  TD                 ++ 
Sbjct: 184 YLNDFKDQLSE--------ESKIRLSKNPMRILDSKSETDQK---------IIANAPVLS 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            + + +                  ++ F EL+   +++           I+  +VRGL+Y
Sbjct: 227 EYYTDES-----------------KEYFEELIKYLDIL------GVEYTINPRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E            K     ++  GGRYDGL       +             I  
Sbjct: 264 YCHTAFEFTTK--------KLGSQSTILAGGRYDGLAKIMGNNDDVPAIGFAAGIERIAL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++    S           +  +    +++         LRT  I   +          ++
Sbjct: 316 MREYNISEVK-------PVFVLPIGENNICYALEIVDKLRTENIATIIEPLG--KIAKRM 366

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +     N  L I  G  E++   L+IKDL K +E   +        +
Sbjct: 367 QRVLNENAKLIIFIGDEEQTNNSLKIKDLKKEEEYIVDFAKALELLK 413


>gi|327330401|gb|EGE72150.1| histidine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 454

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 127/469 (27%), Positives = 200/469 (42%), Gaps = 53/469 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +   GF +       + N +   +   +E +GF PI T  +E  + L +        +
Sbjct: 3   RLKPLSGFPEFLPSGQMVENHVTRILEETFELHGFAPIRTRAVEPMEQLTRKGE----ID 58

Query: 68  KGVFSLQDD----------DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           K V+ + D               + L +DLT P ARYV EN   + FP R Y+I  V+R 
Sbjct: 59  KEVY-VVDRLHADSHDTRSGKDRLGLHFDLTVPFARYVLENAGHLYFPFRRYQIQKVWRG 117

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM--MADTLEAVGIKRN--DYHIGINNRK 173
           E+   GR+R+F Q D+D VG        ++     M   LE +  +       + +NNRK
Sbjct: 118 ERPQEGRYREFTQADIDIVGDQTLAEHHDVETPLVMLSALERLHTELGFPTVTMHVNNRK 177

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +G+       + + VL+ +DK DK G   V+ LL +             NL+
Sbjct: 178 LSEGFYRGLGIA------DPMAVLQRVDKYDKIGPDAVRKLLVDE-----------LNLS 220

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            +     V+  SI       + ++ EL       E+G + L  +   V K      R+  
Sbjct: 221 DDAAAKCVALASIQSTDDSFIAKVRELGVANDMLEEGLDSLNRVVAAVNK--AVPGRMVA 278

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  I RGL+YYTG VYE  L              GSV  GGRY+ L S  K    P  G 
Sbjct: 279 NLKIARGLDYYTGTVYETELTG--------HESMGSVCSGGRYESLASDGKHV-YPGVGI 329

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           S+G++RL+  + S    +++      VL+     +  + S+       LR+ GI  E+  
Sbjct: 330 SLGLTRLLAPILSRGELSSSRSVPSAVLVAVNTEEDRATSEV--IASALRSRGIPCEVAP 387

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERS-RGMLQIKDLAKGKELSRE 459
            + K FG Q+K+ADRR  P     G      R    +KD+  G ++  +
Sbjct: 388 KADK-FGKQIKHADRRGIPFVWFPGVKHADYRDADTVKDIRSGDQVEAD 435


>gi|50842649|ref|YP_055876.1| histidyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289425580|ref|ZP_06427357.1| histidine--tRNA ligase [Propionibacterium acnes SK187]
 gi|81826444|sp|Q6A8J7|SYH_PROAC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|50840251|gb|AAT82918.1| histidyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289154558|gb|EFD03246.1| histidine--tRNA ligase [Propionibacterium acnes SK187]
 gi|313764309|gb|EFS35673.1| histidyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313812800|gb|EFS50514.1| histidyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313815847|gb|EFS53561.1| histidyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313827640|gb|EFS65354.1| histidyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|314915299|gb|EFS79130.1| histidyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918150|gb|EFS81981.1| histidyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920227|gb|EFS84058.1| histidyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314931750|gb|EFS95581.1| histidyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314955651|gb|EFT00053.1| histidyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314958047|gb|EFT02150.1| histidyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314967483|gb|EFT11582.1| histidyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|315098679|gb|EFT70655.1| histidyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315101318|gb|EFT73294.1| histidyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315105669|gb|EFT77645.1| histidyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315108536|gb|EFT80512.1| histidyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327450637|gb|EGE97291.1| histidyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327454025|gb|EGF00680.1| histidyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328753283|gb|EGF66899.1| histidyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
 gi|328754055|gb|EGF67671.1| histidyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
          Length = 454

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 127/469 (27%), Positives = 200/469 (42%), Gaps = 53/469 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +   GF +       + N +   +   +E +GF PI T  +E  + L +        +
Sbjct: 3   RLKPLSGFPEFLPSGQMVENHVTRILEETFELHGFAPIRTRAVEPMEQLTRKGE----ID 58

Query: 68  KGVFSLQDD----------DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           K V+ + D               + L +DLT P ARYV EN   + FP R Y+I  V+R 
Sbjct: 59  KEVY-VVDRLHADPHDTRSGKDRLGLHFDLTVPFARYVLENAGHLYFPFRRYQIQKVWRG 117

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM--MADTLEAVGIKRN--DYHIGINNRK 173
           E+   GR+R+F Q D+D VG        ++     M   LE +  +       + +NNRK
Sbjct: 118 ERPQEGRYREFTQADIDIVGDQTLAEHHDVETPLVMLSALERLHTELGFPTVTMHVNNRK 177

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +G+       + + VL+ +DK DK G   V+ LL +             NL+
Sbjct: 178 LSEGFYRGLGIA------DPMAVLQRVDKYDKIGPDAVRKLLVDE-----------LNLS 220

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            +     V+  SI       + ++ EL       E+G + L  +   V K      R+  
Sbjct: 221 DDAAAKCVALASIQSTDDSFIAKVRELGVANDMLEEGLDSLNRVVAAVNK--AVPGRMVA 278

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  I RGL+YYTG VYE  L              GSV  GGRY+ L S  K    P  G 
Sbjct: 279 NLKIARGLDYYTGTVYETELTG--------HESMGSVCSGGRYESLASDGKHV-YPGVGI 329

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           S+G++RL+  + S    +++      VL+     +  + S+       LR+ GI  E+  
Sbjct: 330 SLGLTRLLAPILSRGELSSSRSVPSAVLVAVNTEEDRATSEV--IASALRSRGIPCEVAP 387

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERS-RGMLQIKDLAKGKELSRE 459
            + K FG Q+K+ADRR  P     G      R    +KD+  G ++  +
Sbjct: 388 KADK-FGKQIKHADRRGIPFVWFPGVKHADYRDADTVKDIRSGDQVEAD 435


>gi|116670840|ref|YP_831773.1| histidyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116610949|gb|ABK03673.1| histidyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 447

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 128/469 (27%), Positives = 196/469 (41%), Gaps = 49/469 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +   +E  +   +LD++R ++E +GF  IET  +E    L +        +K V+ 
Sbjct: 8   SGFPEWLPEERLVELHVLDTLRRVFELHGFSSIETRAVETVGQLLRKGE----IDKEVYG 63

Query: 73  L----QDDDG--------QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           L    +D++           ++L +DLT P ARYV EN   + FP R Y+I  V+R E+ 
Sbjct: 64  LSRLQEDEEDSRAAKGDHHSLALHFDLTVPFARYVVENAGYLAFPFRRYQIQKVWRGERP 123

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+F Q D+D VG        ++ + +        +   D+ + INNRK+ +G   
Sbjct: 124 QEGRAREFTQADIDIVGDGELPFRYDVEIALVIAEALSALPIPDFRLRINNRKLAEGFYR 183

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            IG      L +   VLR+IDKL+K G   V  LL                 + EQ    
Sbjct: 184 GIG------LTDTAGVLRSIDKLEKIGPAKVADLLK-----------TELGASEEQAQAA 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +S   I  E +         G            +   +         ++    +I RGL+
Sbjct: 227 LSLAGIRTEDTSFVEKVRALGVKDELLEEGLNELEQVIAAAVQRAPGKVVADLSIARGLD 286

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V E +L              GS+  GGRYD L S+   +  P  G SIG++RL+ 
Sbjct: 287 YYTGTVVETVLVG--------HEQLGSICSGGRYDALASK-GNRKFPGVGLSIGVTRLVS 337

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            + S E          P  +    ++ DS    Q     LR+ GI  E+   + K FG Q
Sbjct: 338 RILSQEL--AQATRSVPTAVLVALNNDDSWGAAQDVAAQLRSRGISTEVAAKAEK-FGKQ 394

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +K+ADRR  P            G  Q+KD+  G++   +  +     E 
Sbjct: 395 IKFADRRGIPFVWFTDDD----GKHQVKDIRSGEQTDADPASWTPAEED 439


>gi|328876729|gb|EGG25092.1| histidine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 446

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 90/478 (18%), Positives = 170/478 (35%), Gaps = 46/478 (9%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
            +  RG  D    + R+ N I ++ R +   YG+  + TP++E  +   + +  + D   
Sbjct: 2   IKSIRGTVDLFPDQKRLYNFITETGRKVCGKYGYRDMSTPIIEPLELFTRSVGTESDIVM 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFR 126
           K +++ +D  G    LR + TA L R    +F+  V  P R +  GP+FR E+   GR R
Sbjct: 62  KEMYNFKDQGGSMTCLRPEGTAGLMRAFINDFNHTVQLPQRFFYAGPMFRYERPQRGRQR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   + +G     AD E        L+++GI ++   + IN+    +     +    
Sbjct: 122 QFEQLGCELIGEDHYLADVESIETSLQFLDSIGIDQSKIQLKINSLGDEESRSNYLK-SL 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +    RL  L A  K        +++L  +   D          L ++Q   ++ FL++
Sbjct: 181 KEYYASRLDQLSADSKTRFERGNFLRILDSKDENDR---------LINQQAPNILDFLNV 231

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +  +    +   ++                         +   +I   +VRGL+YY+  +
Sbjct: 232 NSNQRFKNILLNLEK-----------------------GNINYEIDQGLVRGLDYYSHTI 268

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +      +             GG     +++  G    A         +   + +L 
Sbjct: 269 FEVVTKSNGDSAAAAAASPPLALLGGGRYDSLAKQLGYKGGALPSIGWACGMERLILNLG 328

Query: 367 SSTNNIKEMGPVLI-----TTMDHDSDSL-SKYQMYTQMLRTAGIRA---EMFLGSSKNF 417
            +    + +   L+        D   ++L  +     + LR A       E  L S  N 
Sbjct: 329 ENVVPKERLPLFLVTNNSGLVDDQQKEALTQQSLDIVRSLRKADQYVMTSEYQLLSGGNI 388

Query: 418 GNQLKYAD-RRNCPLAIIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQ 473
             QLK    R      I+  +       + IKD+    +     I   +        Q
Sbjct: 389 SKQLKRVSGRYQSRYVIVVNSESLQNQTVSIKDMLNHSQSDQIPINTLDQQFNKLNNQ 446


>gi|282853878|ref|ZP_06263215.1| histidine--tRNA ligase [Propionibacterium acnes J139]
 gi|282583331|gb|EFB88711.1| histidine--tRNA ligase [Propionibacterium acnes J139]
 gi|314923573|gb|EFS87404.1| histidyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314966618|gb|EFT10717.1| histidyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314981347|gb|EFT25441.1| histidyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315092013|gb|EFT63989.1| histidyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315092860|gb|EFT64836.1| histidyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315103620|gb|EFT75596.1| histidyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327327442|gb|EGE69218.1| histidine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 454

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 127/469 (27%), Positives = 200/469 (42%), Gaps = 53/469 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +   GF +       + N +   +   +E +GF PI T  +E  + L +        +
Sbjct: 3   RLKPLSGFPEFLPSGQMVENHVTQILEETFELHGFVPIRTRAVEPMEQLTRKGE----ID 58

Query: 68  KGVFSLQDD----------DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           K V+ + D               + L +DLT P ARYV EN   + FP R Y+I  V+R 
Sbjct: 59  KEVY-VVDRLHADPHDTRSGKDRLGLHFDLTVPFARYVLENAGHLYFPFRRYQIQKVWRG 117

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM--MADTLEAVGIKRN--DYHIGINNRK 173
           E+   GR+R+F Q D+D VG        ++     M   LE +  +       + +NNRK
Sbjct: 118 ERPQEGRYREFTQADIDIVGDQILAEHHDVETPLVMLSALERLHTELGFPTVTMHVNNRK 177

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +G+       + + VL+ +DK DK G   V+ LL +             NL+
Sbjct: 178 LSEGFYRGLGIA------DPMAVLQRVDKYDKIGPDAVRKLLVDE-----------LNLS 220

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            +     V+  SI       + ++ EL       E+G + L  +   V K      R+  
Sbjct: 221 DDAAAKCVALASIQSADDSFIAKVRELGVANEMLEEGLDSLNRVVAAVNK--AVPGRMVA 278

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  I RGL+YYTG VYE  L              GSV  GGRY+ L S  K    P  G 
Sbjct: 279 NLKIARGLDYYTGTVYETELTG--------HESMGSVCSGGRYESLASDGKHV-YPGVGI 329

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           S+G++RL+  + S    +++      VL+     +  + S+       LR+ GI  E+  
Sbjct: 330 SLGLTRLLAPILSRGELSSSRSVPSAVLVAVNTEEDRATSEV--VASALRSRGIPCEVAP 387

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERS-RGMLQIKDLAKGKELSRE 459
            + K FG Q+K+ADRR  P     G      R    +KD+  G ++  +
Sbjct: 388 KADK-FGKQIKHADRRGIPFVWFPGVKHADHRDADTVKDIRSGDQVEAD 435


>gi|295130727|ref|YP_003581390.1| histidine--tRNA ligase [Propionibacterium acnes SK137]
 gi|291375206|gb|ADD99060.1| histidine--tRNA ligase [Propionibacterium acnes SK137]
 gi|313771972|gb|EFS37938.1| histidyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313810172|gb|EFS47893.1| histidyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313818702|gb|EFS56416.1| histidyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313820472|gb|EFS58186.1| histidyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313822722|gb|EFS60436.1| histidyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313825344|gb|EFS63058.1| histidyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313830503|gb|EFS68217.1| histidyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313833539|gb|EFS71253.1| histidyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314925081|gb|EFS88912.1| histidyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314960382|gb|EFT04484.1| histidyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314973503|gb|EFT17599.1| histidyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976183|gb|EFT20278.1| histidyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978558|gb|EFT22652.1| histidyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314983795|gb|EFT27887.1| histidyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314987976|gb|EFT32067.1| histidyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314989786|gb|EFT33877.1| histidyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315080493|gb|EFT52469.1| histidyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315084164|gb|EFT56140.1| histidyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315085507|gb|EFT57483.1| histidyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088436|gb|EFT60412.1| histidyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315096050|gb|EFT68026.1| histidyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327326330|gb|EGE68120.1| histidine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327331795|gb|EGE73532.1| histidine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327443572|gb|EGE90226.1| histidyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327445776|gb|EGE92430.1| histidyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327448241|gb|EGE94895.1| histidyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328753327|gb|EGF66943.1| histidyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328760708|gb|EGF74274.1| histidine--tRNA ligase [Propionibacterium acnes HL099PA1]
 gi|332675572|gb|AEE72388.1| histidine--tRNA ligase [Propionibacterium acnes 266]
          Length = 454

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 127/469 (27%), Positives = 200/469 (42%), Gaps = 53/469 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +   GF +       + N +   +   +E +GF PI T  +E  + L +        +
Sbjct: 3   RLKPLSGFPEFLPSGQMVENHVTRILEETFELHGFAPIRTRAVEPMEQLTRKGE----ID 58

Query: 68  KGVFSLQDD----------DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           K V+ + D               + L +DLT P ARYV EN   + FP R Y+I  V+R 
Sbjct: 59  KEVY-VVDRLHADSHDTRSGKDRLGLHFDLTVPFARYVLENAGHLYFPFRRYQIQKVWRG 117

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM--MADTLEAVGIKRN--DYHIGINNRK 173
           E+   GR+R+F Q D+D VG        ++     M   LE +  +       + +NNRK
Sbjct: 118 ERPQEGRYREFTQADIDIVGDQTLAEHHDVETPLVMLSALERLHTELGFPTVTMHVNNRK 177

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +G+       + + VL+ +DK DK G   V+ LL +             NL+
Sbjct: 178 LSEGFYRGLGIA------DPMAVLQRVDKYDKIGPDAVRKLLVDE-----------LNLS 220

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            +     V+  SI       + ++ EL       E+G + L  +   V K      R+  
Sbjct: 221 DDAAAKCVALASIQSVDDSFIAKVRELGVANDMLEEGLDSLNRVVAAVNK--AVPGRMVA 278

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  I RGL+YYTG VYE  L              GSV  GGRY+ L S  K    P  G 
Sbjct: 279 NLKIARGLDYYTGTVYETELTG--------HESMGSVCSGGRYESLASDGKHV-YPGVGI 329

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           S+G++RL+  + S    +++      VL+     +  + S+       LR+ GI  E+  
Sbjct: 330 SLGLTRLLAPILSRGELSSSRSVPSAVLVAVNTEEDRATSEV--IASALRSRGIPCEVAP 387

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERS-RGMLQIKDLAKGKELSRE 459
            + K FG Q+K+ADRR  P     G      R    +KD+  G ++  +
Sbjct: 388 KADK-FGKQIKHADRRGIPFVWFPGVKHADYRDADTVKDIRSGDQVEAD 435


>gi|87198314|ref|YP_495571.1| histidyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|123490940|sp|Q2GBN6|SYH_NOVAD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|87133995|gb|ABD24737.1| histidyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 419

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 87/428 (20%), Positives = 158/428 (36%), Gaps = 52/428 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
             +  RG  D    +      ++++   + + Y F  +E P+ E +    + L +  D  
Sbjct: 5   TPQPIRGTQDIFGPDAEAFAFVVETFERVRKLYRFRRVEMPVFEKTAVFSRSLGETTDVV 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S +D  G+ ++LR + TA +AR    +      P +    GP+FR E+   GR+R
Sbjct: 65  SKEMYSFEDRGGESLTLRPEFTAGIARAYLTDGWQQYAPLKVATHGPLFRYERPQKGRYR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL-DGILEKIGLH 185
           QF Q D + +G+    AD E+ +M    L+ +GI  ND          L DG   +    
Sbjct: 125 QFHQIDAEIIGAGEPQADVELLVMADQLLKELGIGANDPGAVTLQLNTLGDGASREAWRA 184

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +         + D  D+     +++L  +   D            +     +  FLS
Sbjct: 185 ALVEYFRAHKAELSEDSQDRLERNPLRILDSKDPRDKPF---------TADAPRIDDFLS 235

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + +    ++   +                                +  +VRGL+YY   
Sbjct: 236 AEAQDFFGKVTSGLDAA-----------------------GVEWTRAPALVRGLDYYRHT 272

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E +          +    G+V GGGRYDGL+    G   PA G++ GI RL + +   
Sbjct: 273 AFEFVT--------DRLGAQGTVLGGGRYDGLMEALGGAATPAVGWAAGIERLAMLVGEK 324

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                         +  +  D   L+        LR  G+ AE+   +S +   +   A 
Sbjct: 325 GE--------ARTDVIVVVEDDALLTSGIEQVSRLRREGVSAELV--ASGSARKRFDKAV 374

Query: 426 RRNCPLAI 433
           +      +
Sbjct: 375 KMGAKAIL 382


>gi|119716624|ref|YP_923589.1| histidyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119537285|gb|ABL81902.1| histidyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 451

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 129/493 (26%), Positives = 215/493 (43%), Gaps = 58/493 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T L      GF +   ++  +  +++D++R+ +E YGF  IET  +E  D L +  
Sbjct: 1   MAKPTPL-----SGFPELLPEQRVVEQQVVDTLRHTFELYGFAGIETRAVEPLDQLLRKG 55

Query: 61  PDEDRPNKGVFSLQDDDGQW------ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
                 +K V+ L+    +       I L +DLT P ARYV EN   + FP R Y+I   
Sbjct: 56  D----TSKEVYLLRRLHEESAEGHSGIGLHFDLTVPFARYVLENAGRLEFPFRRYQIQKA 111

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSS--AETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           +R E+   GR+R+F Q D+D +G        D E+  +M D L  +      + + +NNR
Sbjct: 112 WRGERPQEGRYREFTQADIDVIGRDELPFHHDVEVTRVMVDALNRL-DFLPAFRLQVNNR 170

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K++ G    +G+   D+       +R +DKLDK  ++ V+ +L              A +
Sbjct: 171 KLIQGFYAGLGVADTDEA------MRIVDKLDKLPVEKVRAML-----------VAEAGV 213

Query: 233 TSEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
                D ++S  +I       +  +  L       ++G  EL  +         +  ++ 
Sbjct: 214 DEATADRVLSLATIRATDDSFVDAVRALGVEHPLLDEGLAELGALVRACADLVSDRVQVV 273

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              +I RGL+YYTG V+E  L              GS+  GGRYD L S  +    P  G
Sbjct: 274 ADLSIARGLDYYTGTVFETRLDGYE--------SLGSICSGGRYDALASDGRTT-YPGVG 324

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            S+G+SR++V L +   +        P  +       +S  + +     LR   I  E+ 
Sbjct: 325 ISLGVSRVVVPLMAR--TGLAASRKVPSAVVVAVVSEESRPESEAVAAALRARNIPCEVA 382

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             S++ FG Q++YA+RR  P        E       +KD+  G++++ +  +     E  
Sbjct: 383 -ASAQKFGKQIRYAERRGIPYVWFPDQAE-------VKDIRLGEQVAADPASWTPPIEDL 434

Query: 471 VAQI--TIPISEL 481
             Q+  T P SE+
Sbjct: 435 RPQVVATSPTSEM 447


>gi|167042649|gb|ABZ07370.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine crenarchaeote HF4000_ANIW133M9]
          Length = 432

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 103/466 (22%), Positives = 198/466 (42%), Gaps = 45/466 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ELPRG  D  T E+     +  +  +  + +GFD IE   +E    L        R    
Sbjct: 2   ELPRGMKDFDTDEMIKIEFVRQTFLDTAKTFGFDLIEPSPIELLSVLEAKSGPSIRD--E 59

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D   + ++LR+D T  L RY A     +  P +    G V+R ++   GR+R F 
Sbjct: 60  IYQFKDKGDREVALRFDFTVGLTRYAAS-QKNLKLPAKFSSFGGVWRYDEPQKGRYRFFH 118

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q +++  G+     DAE+    +   + + ++  +  I IN+RK+++  +  +    +  
Sbjct: 119 QWNIETFGNLNTEHDAELIEFTSRFFDNLKLQ--NISIDINHRKLVESYINHVFESNETT 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           L   +   RA+DK+ K     +     +               + E+++ ++ F ++   
Sbjct: 177 LLHDIF--RAVDKIQKKSKDEILQEYKKK------------GYSLEKLEKILEFSNLRG- 221

Query: 250 KSMHELYELVKGTIAG------EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            +  E+ +    +I G         +NEL  +   ++  G   + I+I+  IVRGL+YYT
Sbjct: 222 -TPDEIEQSFDASIEGGGWRELLDSWNELCNLYRSLKNRGV--DNIRINFGIVRGLDYYT 278

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+EA                G++ GGGRYD L + F   ++ ATG + G+ R+I+ L 
Sbjct: 279 GIVFEAF---------DSTSDLGALVGGGRYDSLPNAFGRDDLGATGVAGGVERIILRLD 329

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
               S+    +     I+ +  + +  S        LR  GI   + L ++K+   Q++ 
Sbjct: 330 DQGISSIPPAD----TISVLYVNDELKSDAINCVSKLRKLGISTNIDL-TAKSLKKQMEM 384

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               N    +I    E S   + ++++    E    + +  +  + 
Sbjct: 385 --SANSKFCVIFAPKEFSEKQVVLRNMVDRTEKQISLDDLVTSPKD 428


>gi|313807665|gb|EFS46152.1| histidyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
          Length = 454

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 127/469 (27%), Positives = 200/469 (42%), Gaps = 53/469 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +   GF +       + N +   +   +E +GF PI T  +E  + L +        +
Sbjct: 3   RLKPLSGFPEFLPSGQMVENHVTRILEETFELHGFAPIRTRAVEPMEQLTRKGE----ID 58

Query: 68  KGVFSLQDD----------DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           K V+ + D               + L +DLT P ARYV EN   + FP R Y+I  V+R 
Sbjct: 59  KEVY-VVDRLHADSHDTRSGKDRLGLHFDLTVPFARYVLENAGHLYFPFRRYQIQKVWRG 117

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM--MADTLEAVGIKRN--DYHIGINNRK 173
           E+   GR+R+F Q D+D VG        ++     M   LE +  +       + +NNRK
Sbjct: 118 ERPQEGRYREFTQADIDIVGDQTLAEHHDVEAPLVMLSALERLHTELGFPTVTMHVNNRK 177

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +G+       + + VL+ +DK DK G   V+ LL +             NL+
Sbjct: 178 LSEGFYRGLGIA------DPMAVLQRVDKYDKIGPDAVRKLLVDE-----------LNLS 220

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            +     V+  SI       + ++ EL       E+G + L  +   V K      R+  
Sbjct: 221 DDAAAKCVALASIQSVDDSFIAKVRELGVANDMLEEGLDSLNRVVAAVNK--AVPGRMVA 278

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  I RGL+YYTG VYE  L              GSV  GGRY+ L S  K    P  G 
Sbjct: 279 NLKIARGLDYYTGTVYETELTG--------HESMGSVCSGGRYESLASDGKHV-YPGVGI 329

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           S+G++RL+  + S    +++      VL+     +  + S+       LR+ GI  E+  
Sbjct: 330 SLGLTRLLAPILSRGELSSSRSVPSAVLVAVNTEEDRATSEV--IASALRSRGIPCEVAP 387

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERS-RGMLQIKDLAKGKELSRE 459
            + K FG Q+K+ADRR  P     G      R    +KD+  G ++  +
Sbjct: 388 KADK-FGKQIKHADRRGIPFVWFPGVKHADYRDADTVKDIRSGDQVEAD 435


>gi|312194996|ref|YP_004015057.1| histidyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311226332|gb|ADP79187.1| histidyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 438

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 124/474 (26%), Positives = 198/474 (41%), Gaps = 49/474 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     ++     GF +       +    LD IR  +E YGF  +ETP +E  D L    
Sbjct: 1   MSDAPIVKPVAISGFPEWLPGVRAVELAWLDRIRATFERYGFCSVETPSVESLDVLAAKG 60

Query: 61  PDEDRPNKGVFSLQ-------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
                 ++ V++L+       DD G+ + L +DLT P ARYVA +F+ + FP R Y+I  
Sbjct: 61  E----TSQEVYALRRLQAEPGDDSGR-LGLHFDLTVPFARYVAAHFNELTFPFRRYQIQR 115

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GR+R+F QCD+D +   +     +  +          +    + + +NNRK
Sbjct: 116 VWRGERPQEGRYREFTQCDIDVINVDSVPLYFDAELPRIVHEVLTELNVPAWTLNVNNRK 175

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L G  E +G+       + + V+RA DKLDK G  GV  +L +              LT
Sbjct: 176 LLQGFYEGLGID------DPVAVIRAADKLDKIGPDGVAKVLVD-----------QVGLT 218

Query: 234 SEQIDIMVSF---LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           + Q   ++      + D       +  L   +     G +EL  + + +         + 
Sbjct: 219 AAQAKSVLDLAAVKASDSAAVAEAVGRLGVKSDLLTTGLDELAFVLDELAD--LPVGSVV 276

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              +I RGL+YYTG VYEA               FGS+  GGRYD L   F  +N+P  G
Sbjct: 277 ADLSIARGLDYYTGTVYEAKFVDW--------PGFGSICSGGRYDDLAGSFIRRNLPGVG 328

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG++R+   L +             VL+       +           LR  G++ E +
Sbjct: 329 ISIGLTRIFAKLVAEGMINPGPASPADVLVVI--PSDERRRVAVATAGRLRARGLKVETY 386

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNN 463
             + K    QL+YA+R+               G   ++K+LA G +   +    
Sbjct: 387 HQADK-LAKQLRYANRKGIGALWFPP---FEDGKPHEVKNLATGDQTEADPDTW 436


>gi|239917782|ref|YP_002957340.1| histidyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281413725|ref|ZP_06245467.1| histidyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259511951|sp|C5CCH4|SYH_MICLC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|239838989|gb|ACS30786.1| histidyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 458

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 126/496 (25%), Positives = 200/496 (40%), Gaps = 55/496 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K  L      GF +    E  +   +LD++R  +E +GF  IET  +E    L +  
Sbjct: 1   MSRKASL-----SGFHEWLPAERLVEQHVLDTLRRTFELHGFAGIETRAVETLGQLLRKG 55

Query: 61  PDEDRPNKGVFSL----------------QDDDG-QWISLRYDLTAPLARYVAENFDTIV 103
                 +K V+++                +D    + ++L +DLT P ARYV EN   + 
Sbjct: 56  E----VDKEVYAVSRLAEDEEVAAGRREPKDPADPKRLALHFDLTVPFARYVVENAGHLA 111

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
           FP R Y++  V+R E+   GR R+F Q D+D VG  A +   +  + +        +   
Sbjct: 112 FPFRRYQMQKVWRGERPQEGRAREFTQADIDVVGDGALSPRYDADVALVMAEALGALPIG 171

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
           D+ I +NNRK+ +G    IGL           VLR+IDKL+K G + V  LL E      
Sbjct: 172 DFLIRVNNRKLAEGFYRGIGLED------TAGVLRSIDKLEKVGPEEVARLLQEEV---- 221

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                    + EQ    ++   I    +         G            +   +     
Sbjct: 222 -------GASPEQAAQALALADIRTSDTSFVERVRALGVTHELLEEGLTELADVVATLHR 274

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
               R     +I RGL+YYTG VYE +L              GS+  GGRYD L S+   
Sbjct: 275 RAPGRAVADLSIARGLDYYTGTVYETVLVG--------HEQLGSICSGGRYDALASKGNR 326

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
                 G  + I    + ++ L           P  +       +  S+ Q    +LR  
Sbjct: 327 VFP---GVGLSIGVTRLVMRMLSQQMAVASRSVPTAVYVALTADEDWSEAQDVAALLRER 383

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           GI AE+ + S++ FG Q+KYADRR  P     G  +    + ++KD+  G++ + +  + 
Sbjct: 384 GIPAEVAV-SAEKFGRQIKYADRRGIPFVWFMGRDDAGARVHEVKDIRSGEQHAADPADW 442

Query: 464 ESWREARVAQITIPIS 479
               E  + Q+     
Sbjct: 443 TPPAEDLLPQVARAQD 458


>gi|332796483|ref|YP_004457983.1| histidyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694218|gb|AEE93685.1| histidyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 426

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 99/463 (21%), Positives = 190/463 (41%), Gaps = 44/463 (9%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  RG  D   ++      I +    I +  G+    TP+LE  +       +E R   
Sbjct: 4   YEPLRGMRDYFGEDAEKIRYIEEQFSKIVKKSGYMEAITPILEEFELFALKGGEELRNT- 62

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++  D  G+ ++LR + T  + R    +   +  P R Y IG V+R ++   GR+R+F
Sbjct: 63  -MYTFIDKGGREVALRPEFTPSIVRLFLNSMQHLPKPIRLYYIGTVYRYDEPQFGRYREF 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G S+  AD E+  ++ +    + +   +  I INN  I   +   + +  D 
Sbjct: 122 RQAGIEMLGESSINADLEVLSLLWEFFNKINLT--NITIKINNIAIYRELFSILKMSEDQ 179

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +                     +  L+ +G  D+  ++    N+   +I  ++  +  + 
Sbjct: 180 E-------------------DHLLHLIDKGNKDSVMEYLS--NIADSKILNILREMLYNS 218

Query: 249 EKSMHELYELVK--GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                +  EL+K       +   N++  + ++       +  IKI  ++VRGL YYTG +
Sbjct: 219 ISKESDFIELIKDMNDEHSKVLENQISRLFKIYEILAKLNVPIKIDLSLVRGLAYYTGVI 278

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E             P V  S+ GGGRYD LV  + G + P+ GF+IG+ R++  L++L+
Sbjct: 279 FEVT----------HPSVSFSIAGGGRYDNLVQLYGGPSTPSIGFAIGVERVLSVLQNLK 328

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              N  K      I  +  + + +        +L    I A +    + +    +     
Sbjct: 329 IKDNARK------IAIIPLNENVIDYALKVLFILHENDIPAILN-TKNISLSKIIPNLLD 381

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            N  + II G  E+    + IKDL   ++ S  + +   +   
Sbjct: 382 MNINIVIIIGENEKRENKVSIKDLTTRQQSSISLNDLLPYIRQ 424


>gi|326429672|gb|EGD75242.1| hypothetical protein PTSG_06896 [Salpingoeca sp. ATCC 50818]
          Length = 526

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 98/482 (20%), Positives = 175/482 (36%), Gaps = 73/482 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           +  L +G  D      R  + +  +++     Y +  + TP++EYS+   + L    D  
Sbjct: 75  KHRLVKGTRDVMPGLQREFSFVYQALQETAHAYNYSEMSTPIVEYSELFQRSLGATSDVV 134

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           NK +F+ QD DG  + LR + TA + R V +N        R +  GP+FR E+   GR+R
Sbjct: 135 NKEMFAFQDADGSNVCLRPEGTAGVTRAVIQNLAGESVRQRLFYFGPMFRRERPQKGRYR 194

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE-KIGLH 185
           QF Q  V+  GS+    D E      D L ++G+   D H+ +    + D     K    
Sbjct: 195 QFWQGGVECFGSALPVTDVECIASARDFLCSLGL---DSHVKLEINSLFDADTRAKHRTA 251

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 E    L    +    G   +++L  +   D          + + +   M  F S
Sbjct: 252 LTSYFQEHRASLSRASQERLDGGNPLRILDSKDSGDQ---------VLAARAPRMADFAS 302

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +                        L     ++           ++  +VRGL+YYT  
Sbjct: 303 SEG-----------------------LERKECVLDGLRALDIPFSVNEQLVRGLDYYTHT 339

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVALKS 364
           V+E +         +      +V  GGRYD L +     + +PA G++ G+ RL++ L+ 
Sbjct: 340 VWEFVTT-------EGLGAQNTVLAGGRYDQLATILGSKRQIPAIGWACGVDRLVLLLQE 392

Query: 365 LESSTNNIKEMGPVLIT--------------------------TMDHDSDSLSKYQMYTQ 398
              S         V+                            +     +          
Sbjct: 393 CNVSHPPPPPTAAVIEIHDQPASSATTTSSSSSSSSSSSSSSSSSSPLPEVSRFALSVAH 452

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           MLR  G+      G+      Q+K A ++N    +  GT E   G +++K++   ++   
Sbjct: 453 MLRCRGVSTTHTHGAR--VKQQIKEALQQNVSYLVFIGTQEAQAGKVRLKNVQTEEQHDL 510

Query: 459 EI 460
           ++
Sbjct: 511 DL 512


>gi|118474445|ref|YP_892066.1| histidyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166227956|sp|A0RPD3|SYH_CAMFF RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|118413671|gb|ABK82091.1| histidyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 409

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 100/461 (21%), Positives = 188/461 (40%), Gaps = 55/461 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               RG  D    + ++   I+++   I +NYG++  ETP +E +    + + +  D   
Sbjct: 2   INALRGMKDLLDSDGKLYKFIVETCEQITKNYGYELCETPKMEETSLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K ++   D  G  + LR + TA + R   E  FD      R Y  G +FR E+   GR R
Sbjct: 62  KEMYQFIDKGGNDVCLRPEGTAGVVRAFIEAKFDKAGGVKRYYYYGSMFRYERPQRGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+  G ++   DA + +M+ + L+  GI+       + + + +    +K+    
Sbjct: 122 EFHQFGVECFGEASVYEDASVILMLNEILDKFGIETTLKINSLGDSECMPKYRQKLISFI 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D+K ++        D   +     +++L  + + ++     K A L +E ++        
Sbjct: 182 DEKKDQL-----CEDCRRRLVTNPIRVL--DCKKEHCQILLKNAPLITENLN-------- 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                              E+ ++E   + +++ K+G    + ++   +VRGL+YY    
Sbjct: 227 -------------------EECYSEFEQLKDILTKNG---VKFEVDGRLVRGLDYYCKTA 264

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E +          +     +V GGGRYD LV    G++ PA G+++GI R++  LK  +
Sbjct: 265 FEFV--------SDEIGSKSAVAGGGRYDRLVDFLGGKSTPAVGWAMGIERIMEILKQKD 316

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   + +       LR    + E+    +K+    L  AD+
Sbjct: 317 ------MPNSRDGIYICALDKKYIDEIYKIGFKLRK-NYKVEISY-EAKSPNKHLNLADK 368

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           +   L +  G  E   G +  K+L    E   +I N E   
Sbjct: 369 KFAKLFLCMGEDEAKNGEIWYKNLENKNEKRIKILNLEGEL 409


>gi|15806366|ref|NP_295072.1| histidyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|32130154|sp|Q9RUN5|SYH_DEIRA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|6459101|gb|AAF10919.1|AE001981_4 histidyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 427

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 102/475 (21%), Positives = 183/475 (38%), Gaps = 71/475 (14%)

Query: 7   LRAELPRGFADCPTKE---------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +  + P+G  D                    ++   R + E  G   I+TP+ E ++ + 
Sbjct: 1   MAIQRPKGTNDLLPSGSPKTEAFQRAAAHEWLIAQAREVLERAGAQRIDTPMFEEAELVK 60

Query: 58  KF-LPDEDRPNKGVFS---LQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIG 112
           +      D   K +F+     D  G    LR + TA + R   EN    +  P + +  G
Sbjct: 61  RGVGGSTDIVRKEMFTVYYFGDHGG--YVLRPEGTASIVRAYLENGLKQLPAPLKLWTSG 118

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND----YHIG 168
           P+FR E+H  GR+RQF Q D + +GS+    DAE   +M   ++ +G++           
Sbjct: 119 PMFRAERHQKGRYRQFTQVDYEVLGSADALVDAEAIALMVAVVQKLGLRGVRVKLGSIGD 178

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             +R+  +  L  +      +L++        D  D+     +++L  +  +D       
Sbjct: 179 PEDRERYNAYLRDLFSPHLGRLSD--------DSKDRLERNPMRILDSKSASDQEL---- 226

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
              L    +  M+ FL                    GE    +   +   +   G   + 
Sbjct: 227 ---LAELSVRPMLDFL--------------------GEGAAADFRQVQAYLSDWGVPFD- 262

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
             +  +IVRGL+YY    +E                  ++GGGGRYDGL  +  G +VP 
Sbjct: 263 --LDPSIVRGLDYYRRTAWELHYEG--------IGAKSALGGGGRYDGLSEQLGGGSVPG 312

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G++ G+ RL++AL+        I   G   +     D +++          R +  RAE
Sbjct: 313 IGWAFGVERLLLALEQEGI---EIPGSGGPQLYVAALDEENVPLAARVALAARAS-CRAE 368

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
                +   G+  K A+RR      + G+ E + G L +K+L  G++ +  +   
Sbjct: 369 FAY-RAMKPGSAFKDAERRGAVWVGLIGSEEAAAGTLSLKNLHTGEQKTVPVGEL 422


>gi|313791996|gb|EFS40097.1| histidyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313802054|gb|EFS43288.1| histidyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313838875|gb|EFS76589.1| histidyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314962652|gb|EFT06752.1| histidyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|315077868|gb|EFT49919.1| histidyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327453285|gb|EGE99939.1| histidyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 454

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 127/469 (27%), Positives = 200/469 (42%), Gaps = 53/469 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +   GF +       + N +   +   +E +GF PI T  +E  + L +        +
Sbjct: 3   RLKPLSGFPEFLPSGQMVENHVTRILEETFELHGFAPIRTRAVEPMEQLTRKGE----ID 58

Query: 68  KGVFSLQDD----------DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           K V+ + D               + L +DLT P ARYV EN   + FP R Y+I  V+R 
Sbjct: 59  KEVY-VVDRLHADPHDTRSGKDRLGLHFDLTVPFARYVLENAGHLYFPFRRYQIQKVWRG 117

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM--MADTLEAVGIKRN--DYHIGINNRK 173
           E+   GR+R+F Q D+D VG        ++     M   LE +  +       + +NNRK
Sbjct: 118 ERPQEGRYREFTQADIDIVGDQTLAEHHDVETPLVMLSALERLHTELGFPTVTMHVNNRK 177

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +G+       + + VL+ +DK DK G   V+ LL +             NL+
Sbjct: 178 LSEGFYRGLGIA------DPMAVLQRVDKYDKIGPDAVRKLLVDE-----------LNLS 220

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            +     V+  SI       + ++ EL       E+G + L  +   V K      R+  
Sbjct: 221 DDAAAKCVALASIQSTDDSFIAKVRELGVANDMLEEGLDSLNRVVAAVNK--AVPGRMVA 278

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  I RGL+YYTG VYE  L              GSV  GGRY+ L S  K    P  G 
Sbjct: 279 NLKIARGLDYYTGTVYETELTG--------HESMGSVCSGGRYESLASDGKHV-YPGVGI 329

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           S+G++RL+  + S    +++      VL+     +  + S+       LR+ GI  E+  
Sbjct: 330 SLGLTRLLAPILSRGELSSSRSVPSAVLVAVNTEEDRATSEV--IASALRSRGIPCEVAP 387

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERS-RGMLQIKDLAKGKELSRE 459
            + K FG Q+K+ADRR  P     G      R    +KD+  G ++  +
Sbjct: 388 KADK-FGKQIKHADRRGIPFVWFPGVKHAHYRDADTVKDIRSGDQVEAD 435


>gi|70606470|ref|YP_255340.1| histidyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363438|sp|Q4JAY2|SYH_SULAC RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|68567118|gb|AAY80047.1| histidyl tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 428

 Score =  186 bits (472), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 115/457 (25%), Positives = 195/457 (42%), Gaps = 39/457 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  RG  D   +E+     I ++ R +  N G+  + TP++E          +E R  K
Sbjct: 4   FEPIRGMKDYYGEELNKIKFIEETFRTVVLNSGYQEVYTPIVEDFKLFSLKSGEEIR--K 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D   + ++LR ++T  + R    +   +  P R + +G V+R ++   GR+R+F
Sbjct: 62  TMYVFKDKADREVALRPEITPSIVRVYLNSMQHLPKPLRLFYVGQVYRYDEPQFGRYREF 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +GSS+  AD E+  ++ +  +++G+K +   I INN  I   I  K G+  + 
Sbjct: 122 RQAGVELLGSSSSFADIEVISLLNEIYDSLGLK-DKIIIKINNIGIYREIFNKAGITEEQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           + +           L       V   L E   +N  D             I + F  ++ 
Sbjct: 181 QEHL----------LHLIDKGKVDDALKEFTDNNYKDLITYL--------ISLKFDKLES 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +K      E+ K     E   N+L  ISE++   G    +IKI    VRGL YYTG ++E
Sbjct: 223 DKLESLRREVSKYNFNLEGEINKLSFISEVLEDLG---VKIKIDLGFVRGLAYYTGVIFE 279

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            I           P V  S+ GGGRYD LV  + G + PA GF+IG+ R  + +  ++S 
Sbjct: 280 VI----------HPDVSFSIAGGGRYDNLVRLYGGADTPAIGFAIGVERTALVINKIKSD 329

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
               K    + +  +    DSLS       +LR   I   + L         + Y     
Sbjct: 330 LQRKK----IAVIPLISTKDSLSLAIRLLNILRKNNIIGVLNLKDVP-LSKLMTYYVEEG 384

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
               ++ G  E     + IK L K ++ + +++  E 
Sbjct: 385 YNAIVLIGKKELEENSITIKFLEKREQKTVKLEKIED 421


>gi|288921714|ref|ZP_06415981.1| histidyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288346886|gb|EFC81196.1| histidyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 439

 Score =  186 bits (472), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 130/482 (26%), Positives = 214/482 (44%), Gaps = 57/482 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     +R  L  GF +       +  R LD+IR  +E YGF  +ETP +E  ++L    
Sbjct: 1   MADAPVVRPTLVSGFPEWLPDVRMVELRWLDTIRASFERYGFCSVETPSVEALEALMAKG 60

Query: 61  PDEDRPNKGVFSLQ------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
                 ++ V++L+      DDD   + L +DLT P ARYVA +F+ +VFP + Y+I  V
Sbjct: 61  E----TSQEVYTLRRLQATDDDDSARLGLHFDLTVPFARYVAAHFNDLVFPFKRYQIQRV 116

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAE--MCMMMADTLEAVGIKRNDYHIGINNR 172
           +R E+   GR+R+F QCD+D +         +  +  ++ + L  +G+    + + INNR
Sbjct: 117 WRGERPQEGRYREFTQCDIDVINVDNVPLHFDAELPRIVHEILTTLGVPA--WTLNINNR 174

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+L G  E +G+       + L V+RA DK+DK G  GV+ LL           T    L
Sbjct: 175 KVLQGFYEGLGI------GDPLAVIRAADKIDKIGRAGVEALL-----------TGPVGL 217

Query: 233 TSEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           ++EQ    +    +    +  + E+  L   +    +G +EL  + + +      +  + 
Sbjct: 218 SAEQAKACLDLAGVRGSDASVVDEVGRLGVKSDLLTEGLDELGRVLDDLAD--LPAGSVV 275

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              +I RGL+YYTG VYEA               +GS+  GGRYD L   F  +N+P  G
Sbjct: 276 ADLSIARGLDYYTGTVYEAKFVDA--------PGYGSICSGGRYDDLAGTFIRRNLPGVG 327

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG++R+   L +             +L+       +         + LR  G+R E +
Sbjct: 328 ISIGLTRIFAKLVADGLVGGGPASPAQILMVI--PSDERRQVALATARTLRERGLRVETY 385

Query: 411 LGSSKNFGNQLKYADRRNCPLAI---IQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
             + K    Q++YA R+  P           E       +K++A G +    + +   W 
Sbjct: 386 HQADK-IAKQVRYASRKGIPNVWFPPFADDREHE-----VKNMATGDQ---RVADPAQWA 436

Query: 468 EA 469
             
Sbjct: 437 PD 438


>gi|307296980|ref|ZP_07576796.1| histidyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306877506|gb|EFN08734.1| histidyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 425

 Score =  186 bits (472), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 92/446 (20%), Positives = 167/446 (37%), Gaps = 71/446 (15%)

Query: 1   MGKKTKLRAELP---RGFADCPTKEIRIRN----RILDSIRNIYENYGFDPIETPLLEYS 53
           M K    R + P   RG  D               ++ +   + + YGF  +E P+ E +
Sbjct: 1   MAKTETTRPKTPNAVRGTQDMLGGTAEAFQERFAHVVATFDRVRKLYGFQRVEVPVFEST 60

Query: 54  DSLGKFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
               + L +  D  +K +++  D  G  I+LR + TA ++R    N      P +    G
Sbjct: 61  AVFARSLGESTDVVSKEMYTFDDRGGDSITLRPEFTAGISRAYITNGWQQYAPLKVAAHG 120

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHI 167
           P+FR E+   GRFRQF Q D + +G++   AD E+ ++    L  +G+        +   
Sbjct: 121 PLFRYERPQKGRFRQFHQLDAEIIGAAEPGADVELLVLADQLLRELGVSEGVTLNLNTLG 180

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              +R+     L        D+L+E        + +D+     +++L  +   D      
Sbjct: 181 DAESREAWRAALIAHFEAHRDELSE--------ESIDRLHRNPLRILDSKDPRDRP---- 228

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                 ++    + ++L+ +      ++   +       +    L               
Sbjct: 229 -----VADSAPDIDAYLTDEARSFFEKVTAGLDAAGVAWERNARL--------------- 268

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
                   VRGL+YY    +E I          +    G+V GGGRYDGL+    G + P
Sbjct: 269 --------VRGLDYYRHTAFEFIT--------DRLGAQGTVLGGGRYDGLIENLGGPSTP 312

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           A G++ GI RL + +               + +     D  +L   Q     LR  GI A
Sbjct: 313 AVGWAAGIERLAMLID--------TPPADLLNVIMAVEDDAALPAAQKIIATLRRKGISA 364

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAI 433
           +M   ++ +   +   A + N  + +
Sbjct: 365 DMI--ATGSPRKRYDKATKVNAHVLL 388


>gi|42520882|ref|NP_966797.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|51703314|sp|P62351|SYH_WOLPM RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|42410622|gb|AAS14731.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 408

 Score =  186 bits (471), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 100/469 (21%), Positives = 166/469 (35%), Gaps = 74/469 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +  RG  D    E      I  +   I   YGF P +TP+ E ++   K L D  D 
Sbjct: 1   MTNQTVRGTKDLLFDEWYKFKYIEQTANRISSLYGFLPAQTPIFECTEVFTKTLGDSSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K ++S  D  G+ I+LR + TA + R + E         + +  GP FR E+   GR 
Sbjct: 61  ITKEMYSFNDKGGKSITLRPEFTAAIVRLLIEKKLQTP--IKLFSTGPAFRYERPQKGRQ 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q + +  G     AD E+  +    L   GI +          D       R+ L 
Sbjct: 119 RQFHQINFEVFGIEDPKADIELISLAQHLLTEFGINKNVKLEINSLGDGETITKYREALI 178

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
               K      +            D  ++     +++L  +   D S             
Sbjct: 179 LYFTKYQNDLSE------------DSKNRLIKNPLRILDSKDEKDKS---------IISD 217

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              + ++ + +      ++   +                               +++ +V
Sbjct: 218 APKISNYYTKESSDFFEQILNGLT-----------------------ILDIPYTVNNKLV 254

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY   V+E +         +     G+V  GGRYD LVS   G++ PA GF+ GI 
Sbjct: 255 RGLDYYCHTVFEFVT--------EDLGAQGAVFAGGRYDNLVSSVGGKHTPAIGFAGGIE 306

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R++  +        N        I  +    ++          LR  G+        S  
Sbjct: 307 RIMELI--------NYSPKEERPIYLIPIGREAEKHALTLANELRRNGLYVIYEY--SGT 356

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              ++K A++ N   A+I G  E S   L+IK++  G+E      N   
Sbjct: 357 LRTRMKKANQANAKAALIFGDEELSSKTLKIKNMDTGEEKIIARDNTIE 405


>gi|238650757|ref|YP_002916611.1| histidyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511957|sp|C4K1W2|SYH_RICPU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|238624855|gb|ACR47561.1| histidyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 414

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 84/467 (17%), Positives = 176/467 (37%), Gaps = 63/467 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    + ++ + I+++ R++   YG+  + TP++EY+    + + +  D  
Sbjct: 4   KLQPLRGMKDLLPDDYKVHDYIINTARDVGVLYGYKQMSTPIVEYTKVFNRSMGESSDII 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D    +++LR + TA + R +  N      P + +  GPVFR ++   GR R
Sbjct: 64  SKEIYSFLDKSNDFVALRPEFTACIIRSLISNRLQHKLPLKFFSTGPVFRYDRPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q + + +G+     DA+   +  D L+A+ I+++     +      +R +    L +
Sbjct: 124 QFHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRSVYQQKLVE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L++        +   +     +++L  +  TD                 ++ 
Sbjct: 184 YLNDFKDQLSK--------ESKIRLSKNPMRILDSKSETDQK---------IIANAPVLS 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            + + +                  ++ F EL+   +++        +  I+  +VRGL+Y
Sbjct: 227 EYYTDES-----------------KEYFEELIQYLDIL------GVKYSINPCLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E            K     ++  GGRYDGL       +             I  
Sbjct: 264 YCHTAFEFTTK--------KLGSQSTILAGGRYDGLAKIMGNNDDVPAIGFAAGIERIAL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++    S           +  +    +++         LRT  I   +   S      ++
Sbjct: 316 IREYNISEVK-------PVFVLPIGKNNICYALEIVDKLRTENIAIII--ESLGKIAKRM 366

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +     N    I  G  E++   L+IKDL K +E   +        +
Sbjct: 367 QRIFNENAQFIIFIGDEEQANNNLKIKDLKKEEEYIVDFAKALELLK 413


>gi|103488192|ref|YP_617753.1| histidyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98978269|gb|ABF54420.1| histidyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 431

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 87/437 (19%), Positives = 164/437 (37%), Gaps = 56/437 (12%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K         +  RG  D           ++++   +   YGF  +E P++E +    
Sbjct: 13  MSKDKPARIPTPQPVRGTQDMLGDFADRFAHVVETFERVRRLYGFKRVEVPVIEPTAVFA 72

Query: 58  KFLPDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           + L +  D  +K ++S  D  G+ ++LR + TA +AR    N      P +    GP+FR
Sbjct: 73  RSLGETTDVVSKEMYSFDDRGGESVTLRPEFTAGIARAYITNGWQQYAPLKVATHGPLFR 132

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            E+   GR+RQF Q D + +GS +  ADAE+ +     L+ +GI      + +    + D
Sbjct: 133 YERPQKGRYRQFHQLDAEVLGSDSPLADAELLVFADQLLKELGIAEG---VTLTLNTLGD 189

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
                       +  E      + D L +     +++L  +   D            ++ 
Sbjct: 190 AESRDAWRAALVEHFEAHRGELSEDSLARLDKNPLRILDSKDPRDRP---------IADS 240

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              + +FL+ + +     +   +       +    L                       V
Sbjct: 241 APDIDAFLTGEAQDFFGAVTAGLDAAGVAWERNARL-----------------------V 277

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YY    +E +          +    G+V GGGRYDGL+    G    A G++ GI 
Sbjct: 278 RGLDYYRHTAFEFVT--------DRLGAQGTVLGGGRYDGLIEALGGPPTAAVGWAAGIE 329

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL + ++             P++++    D   +++       +R AG   EM   ++ +
Sbjct: 330 RLAMLVE-------GSSWAEPLVVSIAVEDDRLINEGMRANAAIRRAGFSTEMV--ATGS 380

Query: 417 FGNQLKYADRRNCPLAI 433
              +   A +    + +
Sbjct: 381 PKKRYDRAAKIWAKVLL 397


>gi|269219365|ref|ZP_06163219.1| histidine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211158|gb|EEZ77498.1| histidine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 439

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 137/474 (28%), Positives = 210/474 (44%), Gaps = 47/474 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++     GF +   ++  + +RILD++R  +E +GF  IET  +E  D L +        
Sbjct: 1   MKIAPLSGFPEWLPQDRIVEDRILDALRRTFELHGFSGIETRAVEPLDQLLRKGE----T 56

Query: 67  NKGVFSLQD-DDG----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +K ++ L     G      + L +DLT PLARYV E+   + FP + Y+I  V+R E+  
Sbjct: 57  SKEIYVLSRLQGGPSQDSEMGLHFDLTVPLARYVLEHAGKLDFPFKRYQIQKVWRGERPQ 116

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GRFR+F+Q DVD VG        E+ + +       G+      I  +NRKI  G  E 
Sbjct: 117 DGRFREFVQADVDVVGEQTLPFHNEVELPLVMVDALSGLPIPRVVIRASNRKIAQGFYEA 176

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +G+       +    LR +DKLDK G   V   L E            A  T +Q D+ +
Sbjct: 177 VGIE------DVGETLRIVDKLDKIGPAAVAETLVEK-----------AGTTPQQADLAL 219

Query: 242 SFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
               +    +     + EL + +   E+G +ELV + E    +      +     I RGL
Sbjct: 220 RLADVSGSDASVADRVRELGQRSDLLEEGLDELVRLVEG--ANALIPGSVVADLKIARGL 277

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG VYE++L              GS+  GGRYD LVS  K    P  G SIG+SRL+
Sbjct: 278 DYYTGSVYESVLVG--------HEDLGSICSGGRYDSLVSDGKRT-YPGVGLSIGVSRLV 328

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L  +  +T +     P  +    +D  + +        LR  GI  ++   ++K FG 
Sbjct: 329 SRL--IGKATVSATRKVPTCVLIAVNDEGARAAATATAMKLRRRGIPTDVSPTAAK-FGK 385

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           Q+K+ADRR  P      T E      Q+KD+  G+++  +             Q
Sbjct: 386 QIKFADRRGIPFVWF-STDEGE----QVKDIRTGEQVEADPDAWVPESSDYFPQ 434


>gi|320586757|gb|EFW99420.1| histidyl-tRNA mitochondrial precursor [Grosmannia clavigera kw1407]
          Length = 498

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 124/516 (24%), Positives = 225/516 (43%), Gaps = 53/516 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDR 65
           +  + P+G  D   +    +  IL +IR ++E+ G   ++TP+ E  D+L GK+  +  R
Sbjct: 1   MELKTPKGTTDVVGRVAHRKAEILATIRRVFEDVGGVELDTPVFERRDALAGKYGEEGAR 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPG 123
               ++ L D  G+  SLRYDLT P AR++A N    V   + ++IG V+R ++     G
Sbjct: 61  L---IYDLADQGGELCSLRYDLTVPFARWLAMN--PTVRQIQRFQIGKVYRRDQPALARG 115

Query: 124 RFRQFIQCDVDNV--GSSAETADAEMCMMMADTLEAVG------IKRNDYHIGINNRKIL 175
           R R+F QCD D          +DA++  ++   L  +G       + +   I +N+R+IL
Sbjct: 116 RLREFWQCDFDIAGRAHDRMMSDAKILGILVRVLSRLGLAGLADNRNSVIVIKLNHRRIL 175

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL-----LGEGRTDNSGDFTKGA 230
           DGI    G+           +  A+DKLDK     V+       L     D  G + + A
Sbjct: 176 DGIFAVAGVPE----PLLRPISAAVDKLDKLPWADVRREMLGKGLSADVADRLGHYVQQA 231

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
               E + I+    S     +  +   ++      + G  +++++ E +     +++   
Sbjct: 232 GTLQEMLPILQ--GSSSSSGADDDDSAVLASNNDIQAGVEDMLLLQEYLEAWDIDASAFT 289

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQ-----------KPVVFGSVGGGGRYDGLVS 339
           +  ++ RGL+YYTG + EA++   V + K+            P+  GS+ GGGRYDGLV 
Sbjct: 290 LDLSLARGLDYYTGLICEAVMRDDVRDSKKRNLFDSKISISPPLQIGSIAGGGRYDGLVG 349

Query: 340 RFKGQNVPATGFSIGISRLIVALKSL-----ESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
            +  + +P  G SIG+ R+   L++       +    +  +  V + + D     L +  
Sbjct: 350 MYGKEAIPCVGLSIGVDRVFALLQARQSLMVNAIAKPLAPVLDVYVMSADKRDGLLRERA 409

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             T  L  A IRA   L +      ++     ++ P+ ++    E S G +Q+K    G 
Sbjct: 410 RLTARLWDADIRAHYTLKAKPRLDGEMTA--SKDVPIVVVLHGSELSEGKVQVKQAITG- 466

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                   +            + + ++V  +K +L 
Sbjct: 467 -------RHGGSFSGVFTTKIVSLDKVVEEIKTMLA 495


>gi|296282000|ref|ZP_06859998.1| histidyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 419

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 80/434 (18%), Positives = 156/434 (35%), Gaps = 50/434 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E      ++++   + + Y F   E P+ E ++   + +
Sbjct: 1   MAKTK--TPQAIRGTQDIFGAEAESFAFVVETFERVRKLYRFRRAEMPVFEKTEVFARSI 58

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K ++S +D  G+ ++LR + TA +AR    N      P +    GP+FR E+
Sbjct: 59  GETTDIVSKEMYSFEDRGGESLTLRPEFTAGIARAYLTNGWQQHAPVKLATHGPLFRYER 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q D + +G++    D E+  M    +  +GI+    H+            
Sbjct: 119 PQKGRYRQFHQIDAEIIGAAEPQVDVELLAMADQVIRELGIEGVTLHLNTLGDGDSREAW 178

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +     + + L    + +  ++     +++L  + R D                  
Sbjct: 179 RAALVEHFRSVKDEL----SEESQERLEKNPLRILDSKDRRDQRF---------LADAPK 225

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  FL+ +       +   +                            +   + ++VRGL
Sbjct: 226 IDDFLTDEARGFFDAVTSGLDAA-----------------------GVKWVRAESLVRGL 262

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY    +E  +               ++ GGGRYDGL+    G   PA G++ GI RL 
Sbjct: 263 DYYRHTAFE-FIPDEGSAAADALGSQSTILGGGRYDGLIESLGGSPTPAVGWAAGIERLA 321

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + +   E++  +        +  +    D +          R  G  A   L +S +   
Sbjct: 322 MLVGEKEANAAD--------VMVVAESDDVILTAIRALARFRELGFSA--DLIASGSPKK 371

Query: 420 QLKYADRRNCPLAI 433
           +   A +      +
Sbjct: 372 RFDKAVKTPASAIV 385


>gi|171920557|ref|ZP_02931826.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185179074|ref|ZP_02964808.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024235|ref|ZP_02996934.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518650|ref|ZP_03004089.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524466|ref|ZP_03004475.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867600|ref|ZP_03079602.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273714|ref|ZP_03206249.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554579|ref|YP_002284686.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550573|ref|ZP_03771522.1| histidine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551031|ref|ZP_03771977.1| histidine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|229470702|sp|B5ZB96|SYH_UREU1 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|171903254|gb|EDT49543.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209071|gb|EDU06114.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018892|gb|EDU56932.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997735|gb|EDU66832.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659586|gb|EDX52966.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660657|gb|EDX53912.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249742|gb|EDY74523.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209542080|gb|ACI60309.1| histidyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225378846|gb|EEH01211.1| histidine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379727|gb|EEH02089.1| histidine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 421

 Score =  185 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 96/461 (20%), Positives = 181/461 (39%), Gaps = 50/461 (10%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGV 70
           PRG  D   + +     + + +    + YGF  I+TP+ E+++   K   +  D  +K +
Sbjct: 7   PRGTVDLYNEAMNEFKSLENFLLTTTKKYGFQQIKTPIFEFAELFMKSAGESSDLVSKEM 66

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAE--NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           +  +D   +W++LR + TA + R V E         P +     P FR E+   GR RQF
Sbjct: 67  YLFKDKSDRWLALRPEGTAGVIRAVVENKLLLNNPLPLKLMYFEPCFRYERPQAGRQRQF 126

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G+     D E+  +  + L+ + I      I   +      +  K      +
Sbjct: 127 HQFGVEVLGTKNIYYDFELIALANNILKKLAISDYVLEINYISTAHNRSLWVKSLQEYFN 186

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              + L  L      ++     +++L  +  +           L  +Q   + +FLS + 
Sbjct: 187 LYRDELTPLS----QERITTNPLRILDDKLESQK---------LVVQQAPKITNFLSNEE 233

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++    + +++                            + +++  +VRGL+YY+G V+E
Sbjct: 234 KEEFALIKKMLDEH-----------------------DIKYRVNEGLVRGLDYYSGLVFE 270

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
            I   P      + +   ++ GGGRY  L+ +  G +    GF IGI RL++AL      
Sbjct: 271 FISTSP------RLLGQSTIIGGGRYGQLIKQTGGPDYEGIGFGIGIERLLIALLDSNKQ 324

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGSSKNFGNQLKYADRR 427
             N  E           D +  ++    TQ LR    +  ++ L + K      + A R 
Sbjct: 325 ILNNFEDKY---LIAYFDKELENEAIKLTQSLRINNQLNVDIILDTIKA-DKIFRLAQRL 380

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           N    II    E     + +KDL   ++ +  +   +  +E
Sbjct: 381 NAKKLIILAKKEWLNKQVILKDLLSFEQKTLNLDEIKKIKE 421


>gi|312379076|gb|EFR25474.1| hypothetical protein AND_09158 [Anopheles darlingi]
          Length = 508

 Score =  185 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 186/408 (45%), Gaps = 38/408 (9%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +  +G  D     + +R R L  + +++E +G   I+TP+ E  + L     D+    K
Sbjct: 2   LKTAKGTRDYDPVAMALRQRALKQVIDVFERHGAVTIDTPVFERKELLRGMYGDDA---K 58

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGRFR 126
            ++ LQD  G+ ++LRYDLT P ARY+A    + +   + Y+IG V+R +      GR+R
Sbjct: 59  LIYDLQDQGGELLALRYDLTVPFARYLAM---SNIGHIKRYQIGKVYRRDNPQIGRGRYR 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+QCD D  G+         C+ +   +    +   D+ + +N+RK+LDGI    G+  
Sbjct: 116 EFLQCDFDIAGTYEPMLPDAECLKVLVDILD-KLAVGDFTVMLNHRKLLDGIFGASGVPA 174

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D    +   +  ++DKLDK   +GV+  + E              L  E +D + +++++
Sbjct: 175 D----KFRTIGSSVDKLDKLPWEGVRDEMIE-----------QKGLDEETVDRIRTYVTL 219

Query: 247 DLEKSMHELYEL---VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                + E  E    +K      +G  ++ ++ +     G   +RI  + ++ RGL+YYT
Sbjct: 220 TGGVELIEQLEEDSQLKHFEDAIEGLRDMRLLLKYCELLGV-QDRITFNLSLARGLDYYT 278

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVA 361
           G ++EA+L     N        GS+ GGGRYD LV  F    Q +P  G SIG  R+   
Sbjct: 279 GVIFEAVLRATDEN------SVGSLAGGGRYDNLVGTFHRKGQQIPCVGVSIGFERIFSL 332

Query: 362 LKSL--ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           L+S    S       +    +         L K       L  AGI+ 
Sbjct: 333 LESKASRSGDQRKVRIAETQVYVASAHKGLLLKRLEILNQLWAAGIKC 380


>gi|218658872|ref|ZP_03514802.1| histidyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 231

 Score =  185 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 158/224 (70%), Positives = 178/224 (79%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +IR  N +   IR +YE+YGFDP+ETPL EY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGFVDRTAGDIRAVNEMTAKIREVYEHYGFDPVETPLFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAEMCMMMADTLEA+GIKR DY I +NNRK+LDG+LE 
Sbjct: 126 PGRFRQFMQFDADTVGAPGVQADAEMCMMMADTLEALGIKRGDYVIRVNNRKVLDGVLEA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
           IGL GDDK  +RL VLRAIDKLDKFG +GV LLLG GR D SGD
Sbjct: 186 IGLGGDDKAGQRLNVLRAIDKLDKFGPEGVALLLGPGRKDESGD 229


>gi|32130134|sp|Q92IK8|SYH_RICCN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
          Length = 414

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 85/467 (18%), Positives = 175/467 (37%), Gaps = 63/467 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    + ++ + I++  R++   YG+  + TP++EY+    + + +  D  
Sbjct: 4   KLQPLRGMKDLLPDDYKVHDYIINKARDVGVLYGYKQMSTPIVEYTKVFNRSMGESSDVI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D    +++LR + TA + R +  N      P + +  GPVFR ++   GR R
Sbjct: 64  SKEIYSFLDKSNDFVALRPEFTACIIRSLISNRLQHKLPLKFFSTGPVFRYDRPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q + + +G+     DA+   +  D L+A+ I+++     +      +R +    L +
Sbjct: 124 QFHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRSVYQQKLVE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        +   +     +++L  +  TD                 ++ 
Sbjct: 184 YLNDFKDQLSE--------ESKIRLSKNPMRILDSKSETDQK---------IIANAPVLS 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            + + +                  ++ F EL+   +++        +  I+  +VRGL+Y
Sbjct: 227 EYYTDES-----------------KEYFEELIQYLDIL------GVKYSINPRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E            K     ++  GGRYDGL       +             I  
Sbjct: 264 YCHTAFEFTTK--------KLGSQSTILAGGRYDGLAKIMGNNDDVPAIGFAAGIERIAL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++    S           +  +    +++         LRT  I   +   S      ++
Sbjct: 316 MREYNISEVK-------PVFVLPIGKNNICYALEIVDKLRTENIAIII--ESLGKIAKRM 366

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +     N    I  G  E++   L+IKDL K +E   +        +
Sbjct: 367 QRIFNENAQFIIFIGDEEQANNNLKIKDLKKAEEYIVDFAKALELLK 413


>gi|213691601|ref|YP_002322187.1| Histidine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|254782321|sp|B7GPS9|SYH_BIFLI RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|213523062|gb|ACJ51809.1| Histidine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 466

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 129/502 (25%), Positives = 206/502 (41%), Gaps = 64/502 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +      GF +    E  +  R++D++R ++E  GF  IET  +E   SL K  
Sbjct: 1   MAKGASI-----SGFPEWLPSERVVEQRVIDTLRKVFELNGFIGIETRAVETGASLLKKG 55

Query: 61  PDEDRPNKGVF---SLQDDD-------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
                 +K ++    LQ+          + + L +DLT PL+RYV E+   + FP + ++
Sbjct: 56  E----TSKEIYLLSRLQEVGHESDTPIEERLGLHFDLTVPLSRYVVEHSGALAFPFKRWQ 111

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNV--GSSAETADAEMCMMMADTLEAVG-IKRNDYHI 167
           I  V+R E+   GRFR+F+Q D+D +  G   +  + E+ ++M   LE +         +
Sbjct: 112 IQKVWRGERPQEGRFREFVQADIDVIGAGDLPDHYEVELPLVMVSALEELRAYGLPKATV 171

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
             NNRK+ +G    +GL   +       VLR IDKLDK G   V  LL E          
Sbjct: 172 HANNRKLSEGFYRGLGLTDVE------GVLREIDKLDKIGADEVARLLTETCGATEAQAR 225

Query: 228 KGANLTSEQIDIMVSF-LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
               L               D     H + +  +      +G + L +I +    +    
Sbjct: 226 ACLELAELTASDGAELAAKFDALCESHGIAKDSEAYTLARQGLDTLAMIVD--EAAAIRP 283

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             +     I RGL+YYTG VYE  L              GS+  GGRYD L S+   +  
Sbjct: 284 GSVIADLKIARGLDYYTGSVYETFLDGAA--------SLGSICSGGRYDNLASQ-GNRKY 334

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG+SRL+  +     +  N      VL+   + +             LR  GI 
Sbjct: 335 PGVGLSIGLSRLVSYMLHAAGAHANRVSPAAVLVAVWNEED--RPAANRIANQLRARGIA 392

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAII------------QGTGERSRGMLQIKDLAKGK 454
            ++   ++K  G Q+KYAD+   P                    E       +K++  G+
Sbjct: 393 TDVAPTAAK-LGKQIKYADKLGIPYVWFPATAAEGAEGAEPAGDE-------VKNIVTGE 444

Query: 455 ELSREIKNNESWREARVAQITI 476
           +++ +  + E   +  VAQ T+
Sbjct: 445 QVAADCTSWEP--DTVVAQQTV 464


>gi|325963410|ref|YP_004241316.1| histidyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469497|gb|ADX73182.1| histidyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 455

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 133/485 (27%), Positives = 203/485 (41%), Gaps = 52/485 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            GF +   +E  +   +LD++R ++E +GF  IET  +E    L +        +K V+ 
Sbjct: 8   SGFPEWLPEERLVELHVLDTLRRVFELHGFSSIETRAVETVGQLLRKGE----IDKEVYG 63

Query: 72  --SLQDDDG-----------QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              LQ+D+G             ++L +DLT P ARYV EN   + FP R Y+I  V+R E
Sbjct: 64  LSRLQEDEGTNPVKEGKADPHALALHFDLTVPFARYVVENAGYLAFPFRRYQIQKVWRGE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR R+F Q D+D VG        ++ + +        +   D+ + INNRK+ +G 
Sbjct: 124 RPQEGRAREFTQADIDVVGDGELPFRYDVEIALVIAEALSALPIPDFRLRINNRKLAEGF 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
              IGL       +   VLR+IDKL+K G   V  LL                 T EQ  
Sbjct: 184 YRGIGLD------DTAGVLRSIDKLEKIGPAKVAELLK-----------SELGATDEQAQ 226

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             +    I  E +         G            +   +         ++    +I RG
Sbjct: 227 KALQLAGIRAEDTSFVAQVQALGVTNDLLEEGLAELEQVVEAAVQRAPGKVVADLSIARG 286

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG V E +L              GS+  GGRYD L S+   +  P  G SIG++RL
Sbjct: 287 LDYYTGTVVETVLVG--------HEQLGSICSGGRYDALASK-GNRKFPGVGLSIGVTRL 337

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +  + S + +  +      VL+   + D  S    Q     LR+ GI  E+   + K FG
Sbjct: 338 VSRILSQDLARASRSVPTAVLVALANED--SWDVAQDVAAQLRSRGIPTEVAAKAEK-FG 394

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI-TIP 477
            Q+K+ADRR  P            G  Q+KD+  G+++    +      E    Q+ T+ 
Sbjct: 395 KQIKFADRRGIPFVWFTDDD----GTHQVKDIRTGEQVVAAPETWTPPAEDLTVQVSTVS 450

Query: 478 ISELV 482
               V
Sbjct: 451 EPAAV 455


>gi|156937672|ref|YP_001435468.1| histidyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566656|gb|ABU82061.1| histidyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 429

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 104/460 (22%), Positives = 184/460 (40%), Gaps = 45/460 (9%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           KL  E  RGF D   +E      + +    +  N+ F+    P +E  +        E  
Sbjct: 2   KLDPEPLRGFRDLFGEEAEALEAVTEEAEKLARNWSFERCYLPTVERFELFAMKSGVE-- 59

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             + ++   D  G+ ++LR + TA   R           P + + +  VFR ++    R+
Sbjct: 60  IERSMYVFVDKGGRKVTLRPEATASAVRAYLRLLRPRPKPVKLFTVVNVFRYDEPQFARY 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F Q D +  G+S+   D+E+  M+ +  E +G+    + I + + K L G+L + G+ 
Sbjct: 120 REFYQADFEVFGASSPYQDSELLTMLHEYYENLGLP---HEILLGSVKALRGVLSEEGIE 176

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D+                     V   + +G  D + +  +      E+    V+ LS
Sbjct: 177 ERDQ-------------------DVVLHYVDKGMIDKALELVENKARRPERAKEAVAVLS 217

Query: 246 ID--LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                E+ + E  EL++ +   +  F +L  + + +       + I++     RGL YYT
Sbjct: 218 TKEGGEEVIKEGKELME-SWGYKYRFEDLEEVLKYL--PDDVKSVIRLKLGFARGLAYYT 274

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G +YE  +          P    SV GGGRYD L   +  + VPATGF+IG+ R  +AL 
Sbjct: 275 GLIYEVRV----------PGFPVSVAGGGRYDALTEVYGWERVPATGFAIGLDRTALALM 324

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +  +    ++        + L +  + +   L   K+    L +
Sbjct: 325 KEGRRFVFRPT-----VAVLPLAEEARKVALEVQRELASLDVNS-FLLTEQKSIKKALSF 378

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           A   N  +AII G  E     + IK+L KG ++S      
Sbjct: 379 ASSMNAKVAIIIGKKEVEENKVTIKNLEKGLQVSCGRAEL 418


>gi|158313046|ref|YP_001505554.1| histidyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158108451|gb|ABW10648.1| Histidine--tRNA ligase [Frankia sp. EAN1pec]
          Length = 459

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 128/465 (27%), Positives = 206/465 (44%), Gaps = 48/465 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     +R     GF +       +  R LD+IR  +E YGF  +ETP +E  ++L    
Sbjct: 21  MADAPIVRPTPVSGFPEWLPDVRMVELRWLDTIRATFERYGFCSVETPSVEALEALMAKG 80

Query: 61  PDEDRPNKGVFSLQ------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
                 ++ V++L+      DDD   + L +DLT P ARYVA +F+ +VFP + Y+I  V
Sbjct: 81  E----TSQEVYTLRRLQAEDDDDSARLGLHFDLTVPFARYVAAHFNDLVFPFKRYQIQRV 136

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           +R E+   GRFR+F QCD+D +         +  +          +    + + INNRKI
Sbjct: 137 WRGERPQEGRFREFTQCDIDVINVDNVPLHFDAELPRIVHEVLTTLAVPSWTLNINNRKI 196

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L G  E +G+       + L V+RA DK+DK G +GV+ LL           T    LT+
Sbjct: 197 LQGFYEGLGI------GDPLAVIRAADKIDKIGARGVEALL-----------TGPVGLTA 239

Query: 235 EQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
           EQ    +    +    +  + E+  L   +    +G +EL  + + +      +  +   
Sbjct: 240 EQARACLDLAQVRGSDAGVIDEIGRLGVKSELLTEGLDELARVLDDLAD--LPAGAVVAD 297

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            +I RGL+YYTG VYEA               +GS+  GGRYD L   F  +N+P  G S
Sbjct: 298 LSIARGLDYYTGTVYEAKFVDA--------PGYGSICSGGRYDDLAGTFIRRNLPGVGIS 349

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG++R+   L +             VL+       +  ++     ++LR  G+  E +  
Sbjct: 350 IGLTRIFAKLVADGLIGAGPSSPAQVLMVI--PSDERRAEALATARLLRGRGLNVETYHQ 407

Query: 413 SSKNFGNQLKYADRRNCPLAII--QGTGERSRGMLQIKDLAKGKE 455
           + K    Q++YA R+                    ++KD+A G +
Sbjct: 408 ADK-LAKQIRYASRKGIGHVWFPPFADD----RPHEVKDMATGDQ 447


>gi|332670529|ref|YP_004453537.1| histidyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339567|gb|AEE46150.1| histidyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 459

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 135/481 (28%), Positives = 208/481 (43%), Gaps = 53/481 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R     GF +   +   +   +LD +R  +E +GF  IET  +E  D L +        +
Sbjct: 3   RPTPLSGFPEWLPEGRVVEQHVLDVLRRTFELHGFVGIETRAVEPLDQLLRKGE----TS 58

Query: 68  KGVFSLQ---------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           K V+ L          D  G+ + L +DLT P ARYV E+   + FP R Y+I  V+R E
Sbjct: 59  KEVYVLSRLQEDPESPDRGGR-LGLHFDLTVPFARYVLEHAGHLAFPFRRYQIQKVWRGE 117

Query: 119 KHGPGRFRQFIQCDVDNV--GSSAETADAEMCMMMADTLEAVGIKR-NDYHIGINNRKIL 175
           +   GRFR+F+Q D+D V  G      + E+ ++MA+ L A+         I +NNRK+ 
Sbjct: 118 RPQDGRFREFVQADIDVVGAGELPYHYEVELPLVMAEALGALRDVGLPPVRILVNNRKVA 177

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           +G    IGL   + +      LR+IDKLDK G   V  LL              A  +++
Sbjct: 178 EGFYRGIGLTDVEAV------LRSIDKLDKVGGPAVAELL-----------VAEAGASAD 220

Query: 236 QIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNE--LVVISELVRKSGYNSNRIKI 291
           Q    +    ++ D E  +  +  +     A     +E    + + +   +      ++ 
Sbjct: 221 QAQACLELAAVAGDDESVVDAVRAVADRHGATHPLLDEGLAELGALVRAAAVRAPGVVRA 280

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
              I RGL+YYTG VYE +L              GS+  GGRYD L S       P  G 
Sbjct: 281 ELKIARGLDYYTGSVYETLLVG--------HEQLGSICSGGRYDTLASDGS-STYPGVGL 331

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG+SRL+  L               VL+   + D    S+       LR  GI  E+  
Sbjct: 332 SIGVSRLVSRLLGAGLVRATRAVPSAVLVAVANEDDRGRSQDVAIA--LRARGIPVEVAP 389

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGT---GERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            ++K FG Q+++ADRR  P     G     + +R   Q+KD+  G+++  +    +   E
Sbjct: 390 SAAK-FGKQIRHADRRGIPFVWFPGDPAAEDPARVADQVKDIRSGEQVPADAATWQPPAE 448

Query: 469 A 469
            
Sbjct: 449 D 449


>gi|269956472|ref|YP_003326261.1| histidyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305153|gb|ACZ30703.1| histidyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 453

 Score =  184 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 133/477 (27%), Positives = 198/477 (41%), Gaps = 50/477 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R     GF +       +   +LD++R  +E +GF  IET  +E  D L +        +
Sbjct: 3   RIAPLSGFPEWLPDGRVVEQHVLDTLRRTFELHGFAGIETRAVEPLDQLLRKGE----TS 58

Query: 68  KGVFSL----QDDD----GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           K V+ L     D D     + + L +DLT P ARYV EN   + FP + Y+I  V+R E+
Sbjct: 59  KEVYVLRRLQADPDAVDSDKQLGLHFDLTVPFARYVLENAGRLSFPFKRYQIQKVWRGER 118

Query: 120 HGPGRFRQFIQCDVDNV--GSSAETADAEMCMMMADTLEAVGIKR-NDYHIGINNRKILD 176
              GRFR+F Q D+D V  G      + E+ ++MA+ L  +         I +NNRK+ +
Sbjct: 119 PQDGRFREFAQADIDVVGAGELPYHYEVELPLVMAEALGRLADVGLPPVRILVNNRKVAE 178

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G    +GL   +       VLR +DKLDK G   V  LLG                T EQ
Sbjct: 179 GFYRGLGLDDVE------GVLRNLDKLDKVGPDAVAELLG-----------TECGATPEQ 221

Query: 237 IDIMVSFLSIDLEK--SMHELYELVKGTIAGEKGFNELVVISELV--RKSGYNSNRIKIS 292
               +    I       +  +  L     AG +     +     +    +      +   
Sbjct: 222 AKACLELAGITGSDVSVIDAVRALAAAYGAGTELLEAGLAELGALIEAAAVRAPGVVVAD 281

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
             I RGL+YYTG VYE +L              GS+  GGRYD L S  K    P  G S
Sbjct: 282 LKIARGLDYYTGSVYETVLVG--------HEGLGSICSGGRYDTLASDGKNT-YPGVGLS 332

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG+SRL+  L S             VL+       +  +        LR  GI  ++   
Sbjct: 333 IGVSRLVSRLLSAGLVRATRGVPTAVLVAVTS--EEQRAASDAVAAALRARGIPVDVAPK 390

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           ++K FG Q+++ADRR  P     G  +R+ G +  KD+  G+++  +        + 
Sbjct: 391 AAK-FGKQIQFADRRGIPYVWFPGEEDRAAGSV--KDIRSGEQVEADAGTWAPPAQD 444


>gi|226356066|ref|YP_002785806.1| histidyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|259511942|sp|C1CV35|SYH_DEIDV RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|226318056|gb|ACO46052.1| putative histidine--tRNA ligase (histidyl-tRNA synthetase)
           [Deinococcus deserti VCD115]
          Length = 448

 Score =  184 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 101/490 (20%), Positives = 190/490 (38%), Gaps = 76/490 (15%)

Query: 7   LRAELPRGFADCPTKE---------IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           +  + P+G  D                    + ++ R + E  G    +TPL E ++ + 
Sbjct: 1   MAIKRPKGTQDHLPDGSPKLSLDTRAAAFTFVRETARRVLERAGAQFTDTPLFEEAELVQ 60

Query: 58  KF-LPDEDRPNKGVFS---LQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIG 112
           +      D   K +F+     D  G    LR + TA L R   +N    +  P + +  G
Sbjct: 61  RGVGGSTDIVRKEMFTVYYFGDHGG--FILRPEGTAGLVRSYLQNGLKQLPAPLKLWTHG 118

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND----YHIG 168
           P+FR E    GR RQF Q D + +GS+    DAE   +M + + A+G+++          
Sbjct: 119 PMFRAENVQKGRLRQFHQVDYEVLGSADALVDAEAIALMTEVVRALGVQKVKVKLGSIGD 178

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             +R+  +  L ++     + L++        D  D+     +++L  +  +D +     
Sbjct: 179 PEDREAYNTYLRELFTPHLEALSD--------DSKDRLNRNPMRILDSKSESDQTLIAQL 230

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           G       +  M+ FL                    GE        +   +         
Sbjct: 231 G-------VRPMLDFL--------------------GEGARTHFEQVQAYLNAW---DVS 260

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-P 347
            ++  +IVRGL+YY    +E           +      ++GGGGRYDGL      + V P
Sbjct: 261 YEVDPSIVRGLDYYRRTAWEL--------HHEGVGAKSALGGGGRYDGLAQELGSKEVVP 312

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             G++ GI RL++A+ +   +         + +  MD ++ + +     T   RTA  RA
Sbjct: 313 GIGWAFGIERLLLAMDAEGVALPE-TSGPLLYVAAMDDENVTYAATVALTTR-RTA--RA 368

Query: 408 EMFLGSSKNFG--NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           E      +        + A+RR      + G+ E ++  L IK+L  G++   + ++ ++
Sbjct: 369 EFAY---RAMKPAAAFRDAERRGARFIALIGSDEVAQDTLSIKNLQTGQQSKVQTRDLQA 425

Query: 466 WREARVAQIT 475
           +   +  Q +
Sbjct: 426 FLAGQADQHS 435


>gi|329928179|ref|ZP_08282125.1| histidine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328938056|gb|EGG34455.1| histidine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 428

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 114/459 (24%), Positives = 192/459 (41%), Gaps = 37/459 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +  +G  D   +E   R ++  ++R ++E Y +  +E+ +L   + L       +   K 
Sbjct: 2   QNVKGTYDYFGQEQAARRKVQSTLREVFECYDYAEMESTILNELELLSSKYAGGEEIIKE 61

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++ L D   + + LRYDLT P A+ +A N   I  P + Y +G VFR+     GR R+F+
Sbjct: 62  MYQLTDQGARQLGLRYDLTIPFAKVIALN-PGISQPFKRYEMGKVFRDGPVKRGRLREFL 120

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           QCDVD VG +   A+ E+  + A+    + I      +  NNR  L  +L  +G+     
Sbjct: 121 QCDVDVVGVAGPEAEVELMQLAAEVFRRLEIPI---VLRWNNRGFLGELLGAMGVP---- 173

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
            N    V+  +DKLDK G +GV+  L +   D             E    ++SF+  DL+
Sbjct: 174 ANLSSSVMLTLDKLDKIGREGVRKELADKVID------------PEISRRILSFV--DLK 219

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +   E          G       V I + + +     +       + RGL +YTG VYE 
Sbjct: 220 EPTFEQITRTYNLEPGRGARE--VQILQSLLQRVGLQDVCVFDPFLSRGLSFYTGTVYEI 277

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +GGGGRYD ++ +  G+   A         +   ++ L    
Sbjct: 278 YDASHAFRSS--------LGGGGRYDAIIGQLVGREDLAYPTVGLSFGMESIIEMLRDRV 329

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   V+I       D++ +  M    LR  GIR  +     +     L        
Sbjct: 330 VETNRPHVVVIPI----GDAVPEGLMAAAALRNRGIRTRLA-TLRRKLKKTLASVSAEGI 384

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           P AI+ G  E + G+L++K+++ G EL+ ++K  E +  
Sbjct: 385 PYAILIGEDEAAAGVLRLKNMSDGMELTLKLKEAEEFIS 423


>gi|332293137|ref|YP_004431746.1| histidyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332171223|gb|AEE20478.1| histidyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 557

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 121/410 (29%), Positives = 185/410 (45%), Gaps = 52/410 (12%)

Query: 82  SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
           +LRYDLT P ARYV ++ + IVFP + +++ PV+R ++   GRFR+F QCD D VGS + 
Sbjct: 195 ALRYDLTVPFARYVVQHQNDIVFPFKRFQMQPVWRADRPQKGRFREFYQCDADVVGSDSL 254

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
             + E   +      A+  K     I +NNRK+L GI E IG          +    A+D
Sbjct: 255 WQEVEFVQLYDAVFSAL--KLEGVTIKMNNRKVLSGIAEVIGASDK-----LIDFTVALD 307

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELV 259
           KLDK G +GV   +                +T E ID +     LS      +  L  L+
Sbjct: 308 KLDKIGEEGVTKEML------------AKGITQEAIDKVAPLFTLSGTFGDQLATLKTLL 355

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
             +  G +G NEL+ I++ +   G  +  +++  T+ RGL YYTG ++E      V    
Sbjct: 356 ADSETGMEGINELLFINDAIENLGLQTATLQLDVTLARGLNYYTGAIFEVSAPEGVK--- 412

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
                 GS+GGGGRY  L   F  +++   G S G+ R+ + ++ L        E   V 
Sbjct: 413 -----MGSIGGGGRYADLTGIFGLKDMSGVGISFGLDRIYLVIEELGLFPEETTEGVKVF 467

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG---SSKNFGNQLKYADRRNCPLAIIQG 436
                               LR +GI AE++     S+K    Q+ YA+RRN P  ++ G
Sbjct: 468 FVNFGDQEA--GYAMKAISKLRQSGISAELYPDAVTSNKQMKKQMTYANRRNIPFLVLAG 525

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
             E       +K++ +G                  +Q T+ I ELV+ +K
Sbjct: 526 KEEMEAKQYTLKNMVEG------------------SQETVSIDELVAALK 557



 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 8  RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
          +  +P+G  D   +E+  R+ I+++IR  ++ +GF PIETP  E S +L GK+  + DR 
Sbjct: 4  KPSIPKGTRDFSPEEVAKRSYIMNTIRTQFQRFGFQPIETPSFENSSTLMGKYGEEGDRL 63

Query: 67 NKGVFSLQDDDG 78
             +F + +   
Sbjct: 64 ---IFKILNSGD 72


>gi|296454588|ref|YP_003661731.1| histidine--tRNA ligase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184019|gb|ADH00901.1| Histidine--tRNA ligase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 466

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 129/502 (25%), Positives = 206/502 (41%), Gaps = 64/502 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +      GF +    E  +  R++D++R ++E  GF  IET  +E   SL K  
Sbjct: 1   MAKGASI-----SGFPEWLPSERVVEQRVIDTLRKVFELNGFIGIETRAVETGASLLKKG 55

Query: 61  PDEDRPNKGVF---SLQDDD-------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
                 +K ++    LQ+          + + L +DLT PL+RYV E+   + FP + ++
Sbjct: 56  E----TSKEIYLLSRLQEVGHESDTPIEERLGLHFDLTVPLSRYVVEHSGALAFPFKRWQ 111

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNV--GSSAETADAEMCMMMADTLEAVG-IKRNDYHI 167
           I  V+R E+   GRFR+F+Q D+D +  G   +  + E+ ++M   LE +         +
Sbjct: 112 IQKVWRGERPQEGRFREFVQADIDVIGAGDLPDHYEVELPLVMVSALEELRAYGLPKATV 171

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
             NNRK+ +G    +GL   +       VLR IDKLDK G   V  LL E          
Sbjct: 172 HANNRKLSEGFYRGLGLTDVE------GVLREIDKLDKIGADEVARLLTETCGATEAQAR 225

Query: 228 KGANLTSEQIDIMVSF-LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
               L               D     H + +  +      +G + L +I +    +    
Sbjct: 226 ACLELAELTASDGAELAAKFDALCESHGIAKDSEAYTLARQGLDTLAMIVD--EAAAIRP 283

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             +     I RGL+YYTG VYE  L              GS+  GGRYD L S+   +  
Sbjct: 284 GSVIADLKIARGLDYYTGSVYETFLDGAA--------SLGSICSGGRYDNLASQ-GNRKY 334

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG+SRL+  +     +  N      VL+   + +             LR  GI 
Sbjct: 335 PGVGLSIGLSRLVSYMLHTAGAHANRVSPAAVLVAVWNEED--RPAANRIANQLRARGIA 392

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAII------------QGTGERSRGMLQIKDLAKGK 454
            ++   ++K  G Q+KYAD+   P                    E       +K++  G+
Sbjct: 393 TDVAPTAAK-LGKQIKYADKLGIPYVWFPATAAEGAEGAEPAGDE-------VKNIVTGE 444

Query: 455 ELSREIKNNESWREARVAQITI 476
           +++ +  + E   +  VAQ T+
Sbjct: 445 QVAADCTSWEP--DTVVAQQTV 464


>gi|261407438|ref|YP_003243679.1| histidyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261283901|gb|ACX65872.1| histidyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 428

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 114/459 (24%), Positives = 193/459 (42%), Gaps = 37/459 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +  +G  D   +E  +R ++L ++R ++E Y +  +E+ +L   + L       +   K 
Sbjct: 2   QNVKGTYDYFGQEQAVRRKVLSTLREVFECYDYAEMESTILNELELLSSKYAGGEEILKE 61

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++ L D   + + LRYDLT P A+ +A N   I  P + Y +G VFR+     GR R+F+
Sbjct: 62  MYQLTDQGARQLGLRYDLTIPFAKVIALN-PGISQPFKRYEMGKVFRDGPVKRGRLREFL 120

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           QCDVD VG +   A+AE+  +  +    + I      +  NNR  L  +L  +G+  D  
Sbjct: 121 QCDVDVVGVAGPEAEAELMQLAVEVFRRLEIPI---VLRWNNRGFLGELLGGMGVPAD-- 175

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 V+  +DKLDK G +GV+  L +   D             E    ++SF+  DL+
Sbjct: 176 --LSSSVMLTLDKLDKIGREGVRKELADKVID------------PEICRRVLSFV--DLK 219

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +   E          G       V I + + +     +       + RGL +YTG VYE 
Sbjct: 220 EPTFEQITRTYNLEPGRGARE--VQILQSLLQRVGLQDICVFDPFLSRGLSFYTGTVYEI 277

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +GGGGRYD ++ +  G+   A         +   ++ L    
Sbjct: 278 YDASHAFRSS--------LGGGGRYDAIIGQLVGREDMAYPTVGLSFGMESIMEMLRDRV 329

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   V+I       D++ +  M    LR  GIR  +     +     L        
Sbjct: 330 VETNRPHVVVIPI----GDAVPEGLMAAAALRNRGIRTRLA-TLRRKLKKTLASVSAEGI 384

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           P AI+ G  E + G+L++K+++ G EL+ ++   E +  
Sbjct: 385 PYAILIGEDEAAAGVLRLKNMSDGIELTLKLNEAEEFIS 423


>gi|302524212|ref|ZP_07276554.1| histidyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302433107|gb|EFL04923.1| histidyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 407

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 88/428 (20%), Positives = 171/428 (39%), Gaps = 41/428 (9%)

Query: 28  RILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDL 87
           ++   + ++ E YG+   + P+LE ++   +    E   ++ +++L    G+ ++LR ++
Sbjct: 2   QVFGHLYDVLERYGYLRYDGPILEQAEVYERKSGQE-IADQQLYTLTTRGGERLALRPEM 60

Query: 88  TAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM 147
           T  +AR +A +  ++ FP R Y      R E+   GR R+  Q + D  GS +   + EM
Sbjct: 61  TPSVARMIAGHAKSLSFPVRWYSHPNCHRYERPQRGRVREHWQINADIFGSESANCEIEM 120

Query: 148 CMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFG 207
             ++ D + AVG   + + + +N+R +L   L  +     D L +               
Sbjct: 121 FELIHDLMGAVGATPDMFAVRVNDRNLLSSALTDVVGISPDHLPQVF------------- 167

Query: 208 LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK 267
              +     +   +          L+ +Q + +         +++     L+       K
Sbjct: 168 --ALVDRWEKTSAEEHAASAAEIGLSDKQYEKLA--------EALGAGPALLDELPEAVK 217

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
             + LV +           + ++    IVRGL YYT  V+E             P    +
Sbjct: 218 AESNLVKVLSSSAA-----SLVRYEPLIVRGLAYYTSTVFEVFDTS--------PQNRRA 264

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           + GGGRY  L S F  + +   GF +G   L+  L +   +     E   V +T +    
Sbjct: 265 LFGGGRYSNLASMFTKEQISGIGFGMGDVTLMDFLDTHGLTPQPRSE---VDVTVIPVTE 321

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +     +     LR AG+R    L   +  G +L  AD+      +I G  + + G + +
Sbjct: 322 ELADPARDVATALRKAGLRTSTPLEL-RKLGKELTRADKAGAIAVVIVGEEDWAAGRVTV 380

Query: 448 KDLAKGKE 455
           + LA  ++
Sbjct: 381 RSLATREQ 388


>gi|313665223|ref|YP_004047094.1| histidine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949299|gb|ADR23895.1| histidine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 414

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 91/465 (19%), Positives = 179/465 (38%), Gaps = 57/465 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + PRG  D    E ++  ++ + +R I   + +  I TP+ E  +   + +    D  +
Sbjct: 2   LQKPRGTQDFFLDETKLWIKVENKLREILNKFNYSEIRTPIFESKELFIRSIGSTSDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRF 125
           K ++   D   + + L+ + TA + R V EN            Y I P+FR E+   GR+
Sbjct: 62  KEMYEFVDKKNRSLVLKPEGTASVVRAVVENKLYAEDYLPFKTYYISPMFRYERPQNGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEA--VGIKRNDYHIGINNRKILDGILEKIG 183
           RQF Q  ++  GS +   D E+  +  + +    +      Y   +   K  +  + ++ 
Sbjct: 122 RQFHQLGIEVYGSDSIQQDYEVLNIANNIINDFKLNKNIKIYTNYLITGKNREQYILELK 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  D            D   +     +++L  +       +           +  M  F
Sbjct: 182 KYLTDFKL-------CSDCNIRIEKNPLRVLDCKIDDKQFKN-----------VPSMKDF 223

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ + +K   +  +L K         ++L                       VRGL+YYT
Sbjct: 224 LTDEEQKRYQQTLDLFKEMNILTIHDDKL-----------------------VRGLDYYT 260

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G ++E       + +        ++  GGRY+ LV      N+PA GF +G+ R I  +K
Sbjct: 261 GFIFEIKYESKNIEQ--------TIIAGGRYNNLVYEIGNINLPACGFGMGLERFINIIK 312

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
              +  N   +   + + T+  D  ++   Q   ++ R+ G+ ++     + +  + LK 
Sbjct: 313 EQNNELNRNDQ--NIDLYTICLDQSAIKLNQQILELSRSIGLISDSNYY-NLSLKSALKK 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +D+ N    II G  E +     IK+     E+   + N  +  +
Sbjct: 370 SDKLNPKYLIILGEKEATSNQFIIKNEINKTEIKTTLTNFVNDLK 414


>gi|23464645|ref|NP_695248.1| histidyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|317481698|ref|ZP_07940730.1| histidyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|32130113|sp|Q8G864|SYH_BIFLO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|23325203|gb|AAN23884.1| histidyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|316916812|gb|EFV38202.1| histidyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 466

 Score =  183 bits (464), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 129/502 (25%), Positives = 206/502 (41%), Gaps = 64/502 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +      GF +    E  +  R++D++R ++E  GF  IET  +E   SL K  
Sbjct: 1   MAKGASI-----SGFPEWLPSERVVEQRVIDTLRKVFELNGFIGIETRAVETGASLLKKG 55

Query: 61  PDEDRPNKGVF---SLQDDD-------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
                 +K ++    LQ+          + + L +DLT PL+RYV E+   + FP + ++
Sbjct: 56  E----TSKEIYLLSRLQEVGHESDTPIEERLGLHFDLTVPLSRYVVEHSGALAFPFKRWQ 111

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNV--GSSAETADAEMCMMMADTLEAVG-IKRNDYHI 167
           I  V+R E+   GRFR+F+Q D+D +  G   +  + E+ ++M   LE +         +
Sbjct: 112 IQKVWRGERPQEGRFREFVQADIDVIGAGDLPDHYEVELPLVMVSALEELRAYGLPKATV 171

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
             NNRK+ +G    +GL   +       VLR IDKLDK G   V  LL E          
Sbjct: 172 HANNRKLSEGFYRGLGLTDVE------GVLREIDKLDKIGADEVARLLTETCGATEAQAR 225

Query: 228 KGANLTSEQIDIMVSF-LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
               L               D     H + +  +      +G + L +I +    +    
Sbjct: 226 ACLELAELTASDGAELAAKFDALCEAHGIVKDSEAYTLARQGLDTLAMIVD--EAAAIRP 283

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             +     I RGL+YYTG VYE  L              GS+  GGRYD L S+   +  
Sbjct: 284 GSVIADLKIARGLDYYTGSVYETFLDGAA--------SLGSICSGGRYDNLASQ-GNRKY 334

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG+SRL+  +     +  N      VL+   + +             LR  GI 
Sbjct: 335 PGVGLSIGLSRLVSYMLHTAGAHANRVSPAAVLVAVWNEED--RPAANRIANQLRARGIA 392

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAII------------QGTGERSRGMLQIKDLAKGK 454
            ++   ++K  G Q+KYAD+   P                    E       +K++  G+
Sbjct: 393 TDVAPTAAK-LGKQIKYADKLGIPYVWFPATAAEGAEGAEPAGDE-------VKNIVTGE 444

Query: 455 ELSREIKNNESWREARVAQITI 476
           +++ +  + E   +  VAQ T+
Sbjct: 445 QVAADCTSWEP--DTVVAQQTV 464


>gi|303389580|ref|XP_003073022.1| histidyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302166|gb|ADM11662.1| histidyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 445

 Score =  183 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 107/491 (21%), Positives = 194/491 (39%), Gaps = 59/491 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P+G AD P ++  +   I++ IR ++  YG  PI TP  E    L     ++   
Sbjct: 2   ISLKTPKGTADEPPRQCFLYEEIIEKIRTVFVLYGAVPISTPTFEMKSILTNKYGED--- 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++ L+D  G+  +LRYDLT P ARY+A N    +   +  R+    +          
Sbjct: 59  TKLIYDLKDQGGEICALRYDLTVPFARYLASNRIRRMKRYQIGRVYRRDQPSIVRGRLRE 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                           ADAE+   +   L   G    ++ I IN+R+IL  ILE  G+  
Sbjct: 119 FVQADFDIAGECVQMMADAEVVSCVDRILREFG--IGEFRIKINDRRILTSILEVAGVGY 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +        +   IDK++K   + ++                   L  +Q+  +  ++ +
Sbjct: 177 ES----YGTICSTIDKIEKMKWEDIERE------------FIQKGLNEDQVKTIKKYIEL 220

Query: 247 DLEKSMHE--LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             ++ +      + V      +   +++  +  L R  G  S  + +  ++ RGL+YYTG
Sbjct: 221 VGKEDILGLLKEDAVYKIERCKAAIHDMEELFRLCRILGC-SRSLVMDVSLARGLDYYTG 279

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR--FKGQNVPATGFSIGISRLIVAL 362
            + EA                GSV GGGRYD L      +   +P  GFS+G+SR+   L
Sbjct: 280 MILEAEYLGK---------AVGSVIGGGRYDNLTENLGERCATIPCVGFSVGVSRIFSLL 330

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                      +    ++         L +     ++L  AGI +E F     +F +Q K
Sbjct: 331 NE------EYTKESSTMVYVGASGGLFLDERLATLKVLLDAGIPSETFYTRRSSFESQQK 384

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           YA  +  P  ++ G  E     +Q+                  +  A   +  +   E++
Sbjct: 385 YAMGKKIPFIVVIGESEMLANSVQV------------------FETATKKKEIVKREEMI 426

Query: 483 STVKKILQENK 493
           S + ++L++ +
Sbjct: 427 SYLFRLLKDAR 437


>gi|309801886|ref|ZP_07696001.1| histidine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|308221442|gb|EFO77739.1| histidine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 463

 Score =  183 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 130/492 (26%), Positives = 210/492 (42%), Gaps = 47/492 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +      GF +    E  +  R++D++RN++E  GF  IET  +E   SL K  
Sbjct: 1   MAKGASI-----SGFPEWLPSERVVEQRVIDTLRNVFELNGFIGIETRAVEQGSSLLKKG 55

Query: 61  PDEDRPNKGVF---SLQDDD-------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
                 +K ++    LQ+            + L +DLT PL+RYV E+   + FP + ++
Sbjct: 56  E----TSKEIYLLSRLQEVGHESDTPIEDRLGLHFDLTVPLSRYVVEHSGDLAFPFKRWQ 111

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSS--AETADAEMCMMMADTLEAVGIKR-NDYHI 167
           I  V+R E+   GRFR+F+Q D+D +G+    +  + E+ ++M   LE +         +
Sbjct: 112 IQKVWRGERPQEGRFREFVQADIDVIGNGDLPDHYEVELPLVMVSALERLREFGLPKATV 171

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
             NNRK+ +G    +GL   +       VLR IDKLDK G   V  LL EG   N     
Sbjct: 172 HANNRKLSEGFYRGLGLTDVE------GVLREIDKLDKIGADEVAKLLVEGCGANENQAR 225

Query: 228 KGANLTSEQIDIMVSFL-SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
               L               D   + H++       +   +G + L +I +    +    
Sbjct: 226 ACLELAELTAANGADLAEKFDALCAKHDIAADSDAYVLARQGLDTLAMIVD--EAARIRP 283

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             +     I RGL+YYTG VYE  L              GS+  GGRYD L S+   +  
Sbjct: 284 GSVIADLKIARGLDYYTGSVYETFLDGAA--------SLGSICSGGRYDNLASQ-GNKKY 334

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG+SRL+  +     +  N      VL+   +      S   +    LR  GI 
Sbjct: 335 PGVGLSIGLSRLVSYMLHAAGAHANRVSPASVLVAVWNEAD--RSASNVIANQLRARGIA 392

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML--QIKDLAKGKELSREIKNNE 464
           A++   ++K  G Q+KYAD+   P        + +   +  ++K++  G +   + ++ E
Sbjct: 393 ADVAPTAAK-LGKQIKYADKLGIPYVWF--PSDAAEDGVGDEVKNIITGDQQPADARSWE 449

Query: 465 SWREARVAQITI 476
                    +T+
Sbjct: 450 PDTVYARQTVTV 461


>gi|304393165|ref|ZP_07375093.1| histidyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303294172|gb|EFL88544.1| histidyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 575

 Score =  183 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 123/248 (49%), Positives = 163/248 (65%), Gaps = 1/248 (0%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           +F   +  + +       +     ++G+  L     ++R+ GY S +I +  T VRGLEY
Sbjct: 315 NFSGSESLRDLDYSEIDERFRSELKRGYENLFDTILMLREVGYGSEKIAVDLTCVRGLEY 374

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG V+E  L FPV NEK + VVFGSV GGGRYDGL+ RF GQ++PATGFSIG+SRL+ A
Sbjct: 375 YTGTVFECELTFPVKNEKGEEVVFGSVAGGGRYDGLIKRFTGQDIPATGFSIGVSRLMTA 434

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           LK+L    N  + + PV++  MD D+D+L+ YQ   Q LR AGIRAEM+ G+ K FG QL
Sbjct: 435 LKNLGK-LNEDEVLAPVIVGVMDRDADALAGYQKMVQELRQAGIRAEMYQGNPKQFGKQL 493

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           +YADRR  P+AIIQG+ ER  G +Q+KDL +G  LS EI +N  WR AR AQ T+   +L
Sbjct: 494 QYADRRGSPIAIIQGSQEREAGEVQVKDLVEGLRLSEEITDNAEWRAARPAQRTVKREDL 553

Query: 482 VSTVKKIL 489
           V TVK +L
Sbjct: 554 VDTVKAVL 561



 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 140/249 (56%), Positives = 176/249 (70%), Gaps = 4/249 (1%)

Query: 1   MGKKTK---LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG 57
           M K  K   L+A+ PRGF D    +IR  + ++  I+ +YE YGFDP+ETP  EY+D+LG
Sbjct: 1   MAKPKKPQRLKAQQPRGFGDRSAADIRATDAMMAKIKGVYELYGFDPVETPFFEYTDALG 60

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           KFLPD DRPN GVFSLQDDD +W+SLRYDLTAPLAR+ A+N + +  P RTYR G VFRN
Sbjct: 61  KFLPDTDRPNAGVFSLQDDDEKWMSLRYDLTAPLARHFAQNINDLQTPYRTYRAGWVFRN 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           EK GPGRFRQF Q D D VG+   +ADAEMCMMMADT+EA+G+K   Y + +N+R ++D 
Sbjct: 121 EKPGPGRFRQFTQFDADIVGAPNASADAEMCMMMADTMEALGLK-GQYVVKVNSRILIDA 179

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           IL  IGL   +    RL VLRA+DKLD+ G   V+ LLG GR D+SGD+T G  LTS QI
Sbjct: 180 ILNVIGLSNPEDEGRRLGVLRALDKLDRLGEVEVQKLLGAGRRDDSGDWTDGVKLTSSQI 239

Query: 238 DIMVSFLSI 246
           +   + L+ 
Sbjct: 240 EKFSNLLTW 248


>gi|229586565|ref|YP_002845066.1| histidyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511956|sp|C3PN13|SYH_RICAE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|228021615|gb|ACP53323.1| Histidyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 414

 Score =  183 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 86/467 (18%), Positives = 175/467 (37%), Gaps = 63/467 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    + ++ + I++  R++   YG+  + TPL+EY+    + + +  D  
Sbjct: 4   KLQPLRGMKDLLPDDYKVHDYIINKARDVGVLYGYKQMSTPLVEYTKVFNRSMGESSDVI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D    +++LR + TA + R +  N      P + +  GPVFR ++   GR R
Sbjct: 64  SKEIYSFLDKSNDFVALRPEFTACIIRSLISNRLQHKLPLKFFSTGPVFRYDRPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q + + +G+     DA+   +  D L+A+ I+++     +      +R +    L +
Sbjct: 124 QFHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRSVYQQKLVE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D+L+E        +   +     +++L  +  TD                 ++ 
Sbjct: 184 YLNDFKDQLSE--------ESKIRLSKNPMRILDSKSETDQK---------IIANAPVLS 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            + + +                  ++ F EL+   +++        +  I+  +VRGL+Y
Sbjct: 227 EYYTDES-----------------KEYFEELIQYLDIL------GMKYSINPRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y    +E            K     ++  GGRYDGL       +             I  
Sbjct: 264 YCHTAFEFTTK--------KLGSQSTILAGGRYDGLAKIMGNNDDVPAIGFAAGIERIAL 315

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++    S           +  +    +++         LRT  I   +   S      ++
Sbjct: 316 MREYNISEVK-------PVFVLPIGKNNICYALEIVDKLRTENIAIII--ESLGKIAKRM 366

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +     N    I  G  E++   L+IKDL K +E   +        +
Sbjct: 367 QRIFNENAQFIIFIGDEEQANNNLKIKDLKKAEEYIVDFAKALELLK 413


>gi|83319312|ref|YP_424309.1| histidyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|123726526|sp|Q2SSF4|SYH_MYCCT RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|83283198|gb|ABC01130.1| His-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 414

 Score =  183 bits (463), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 91/465 (19%), Positives = 178/465 (38%), Gaps = 57/465 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + PRG  D    E ++  ++   +R I   + +  I TP+ E  +   + +    D  +
Sbjct: 2   LQKPRGTQDFFLDETKLWIKVETKLREILNKFNYSEIRTPMFESKELFIRSIGSTSDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRF 125
           K ++   D   + + L+ + TA + R V EN            Y I P+FR E+   GR+
Sbjct: 62  KEMYEFVDKKNRSLVLKPEGTASVVRAVVENKLYAEDYLPFKTYYISPMFRYERPQNGRY 121

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEA--VGIKRNDYHIGINNRKILDGILEKIG 183
           RQF Q  ++  GS +   D E+  +  + +    +      Y   +   K  +  + ++ 
Sbjct: 122 RQFHQLGIEVYGSDSIQQDYEVLNIANNIINDFKLNKNIKIYTNYLITGKNREQYILELK 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +  D            D   +     +++L  +       +           +  M  F
Sbjct: 182 KYLTDFKL-------CNDCNIRIEKNPLRVLDCKIDDKQFNN-----------VPSMKDF 223

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+ + +K   +  +L K         ++L                       VRGL+YYT
Sbjct: 224 LTDEEQKRYQQTLDLFKEMNISTIHDDKL-----------------------VRGLDYYT 260

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G ++E       + +        ++  GGRY+ LV      N+PA GF +G+ R I  +K
Sbjct: 261 GFIFEIKYEAKNIEQ--------TIIAGGRYNNLVYEIGNINLPACGFGMGLERFINIIK 312

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
              +  N   +   + + T+  D  ++   Q   ++ R+ G+ ++     + +  + LK 
Sbjct: 313 EQNNKLNKNDQ--SIDLYTICLDQSAIKLNQQILELSRSIGLISDSNYY-NMSLKSALKK 369

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +D+ N    II G  E +     IK+     E+   + N  +  +
Sbjct: 370 SDKLNPKYLIILGEKEATSNQFIIKNKINKTEIKTTLTNFVNDLK 414


>gi|258593833|emb|CBE70174.1| ATP phosphoribosyltransferase regulatory subunit [NC10 bacterium
           'Dutch sediment']
          Length = 437

 Score =  183 bits (463), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 96/456 (21%), Positives = 176/456 (38%), Gaps = 42/456 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            +  +P+G    P +E  +R      I  ++E +GF  + TP  EY +        E   
Sbjct: 8   PKTAIPKGVRVFPPEETALRRWAERRILTVFERWGFQEVITPTFEYLEVF--SGEPEREG 65

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
              +F   D   G+ ++LRYD T  +AR  A        P R      +FR+E    GR 
Sbjct: 66  GDKIFKFVDRPTGRLLALRYDPTPQVARLAATTLRHRSLPLRLSYATNIFRDEAPQTGRQ 125

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+++Q  V+ +G     ADAEM  M  +   A+G++R    I +   + + G+++ +G  
Sbjct: 126 REYVQLGVELIGLERPEADAEMVAMAIEGCRALGLQRFQ--IDVGQIEYVRGLVDALGPP 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D +      + R            V++ L            +G +   +    ++    
Sbjct: 184 PDRRRALVSAIDR---------KDTVEIEL----------LVRGLDADDKSKQAVLELPM 224

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +   K +      +      ++    L  + E++ + G  ++++ I     R  EY+TG 
Sbjct: 225 LYGGKEVLARGRDLAPNRRSQEALRNLAQVYEVLEQYG-LADQVIIDLGEARAFEYHTGV 283

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            + A              +   +  GGRYD L+  F     PATGF+  + +++ A+ + 
Sbjct: 284 TFSAFAQ----------GLGSEISRGGRYDDLIGGFGY-PCPATGFAFDLDKVMEAVATE 332

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                            +D + D  +      ++LR  G  A   + + +       YA 
Sbjct: 333 NRPP----PATGQRFLIIDFNPDKRN-ALRVARLLREQGYTAARDIIT-RGLEGSFDYAK 386

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           R     AI+ G     +  L I+DLA G E    ++
Sbjct: 387 RSGIGRAIVLGLPHLPQDELLIRDLASGTEERVPVE 422


>gi|326773272|ref|ZP_08232555.1| histidine--tRNA ligase [Actinomyces viscosus C505]
 gi|326636502|gb|EGE37405.1| histidine--tRNA ligase [Actinomyces viscosus C505]
          Length = 478

 Score =  183 bits (463), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 117/478 (24%), Positives = 192/478 (40%), Gaps = 44/478 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +       +    +D +R  +E +GF  I+T  +E    L K        +K V+ 
Sbjct: 12  SGFPEWLPAGHIVEQHFVDILRRTFELHGFSGIQTRAVEPLSELTKKGE----TSKEVYL 67

Query: 73  L----QDDDG--------QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           L     D           + + L +DLT P ARYV +N   + FP + Y+I  V+R E+ 
Sbjct: 68  LSRLQADPADAESETDPRKQLGLHFDLTVPFARYVVDNAGLLTFPFKRYQIQKVWRGERP 127

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFR+FIQ D+D VG  A     ++ + +        +      I ++NRK+  G  +
Sbjct: 128 QEGRFREFIQADIDIVGDGALPLHHDVEVPLIMHEALSALPVPAVTIHVSNRKVAQGFYQ 187

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            IG+  D  +     VLR +DKLDK G + V   L +     +          + Q   +
Sbjct: 188 SIGIDTDRLI----EVLRVVDKLDKIGPEKVAAELTQSVGTTAQQ--------AAQALRL 235

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG-YNSNRIKISSTIVRGL 299
            +    D +    ++   + G    E     L  ++ L+  +G      +     I RGL
Sbjct: 236 ATITGTDGQDVSDQVLRALAGAEPTELLIEGLAELTALLEATGRRRPGAVIADLKIARGL 295

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG VYE+ +              GSV  GGRYD L +  K       G  I I    
Sbjct: 296 DYYTGTVYESFMAG--------HEDLGSVCSGGRYDSLATNGKRTFP---GVGISIGLSR 344

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +  + +      +    P  +     D             LR  GI A++   ++K FG 
Sbjct: 345 LLARVIGEGLVQVSRAVPTTVLVAVTDEAHRCASDAVADALRARGISADVAPSAAK-FGK 403

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           Q+K AD+R+ P     G+         +KD+  G+++  +    +   +    +IT+ 
Sbjct: 404 QIKAADKRSIPFVWFPGSEGAPD---SVKDIRSGEQVEADAATWQPPTDDAAPRITVS 458


>gi|302866782|ref|YP_003835419.1| histidyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302569641|gb|ADL45843.1| histidyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 446

 Score =  183 bits (463), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 141/491 (28%), Positives = 205/491 (41%), Gaps = 66/491 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T +      GF +    +  I   +LD IR  +E YGF P+ET  +E  D L +  
Sbjct: 1   MSKPTPI-----SGFPEWTPAQRMIEQFVLDRIRATFELYGFAPLETRSVEPLDQLLRKG 55

Query: 61  PDEDRPNKGVFSL----QDDDG----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
                  K V+ L     D DG      + L +DLT P ARYV EN   + FP R Y+I 
Sbjct: 56  D----TAKEVYLLRRLQADTDGPAGDDALGLHFDLTVPFARYVLENAGKLQFPFRRYQIQ 111

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GR+R+F+Q D+D V      A  E  M +        +      I +NNR
Sbjct: 112 KVWRGERPQEGRYREFLQADIDIVDRDTLPAHYEAEMPLVIGDALRSLPIPPVRIQVNNR 171

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           KI +G    IGL   +        LRA+DKLDK G  GV  LL              A  
Sbjct: 172 KICEGFYRGIGLTDAEAA------LRAVDKLDKIGPAGVTELLA-----------STAGA 214

Query: 233 TSEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           +  Q   ++S   I    +     +  L       ++G  EL  + E    + +      
Sbjct: 215 SEAQAKAVLSLAEISAPDASFADAVRGLGVSDPLLDEGVAELTAVVE--TAAAHAPGLCV 272

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
               I RGL+YYTG VYE  +             FGS+  GGRYD L S    +  P  G
Sbjct: 273 ADLRIARGLDYYTGTVYETQMIGYER--------FGSICSGGRYDNLASSGNVR-FPGVG 323

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG++RL+  L   E+ + +      VL+     +    +        LR+ G+  E+ 
Sbjct: 324 ISIGVTRLLGLLFGAEALSVSRSVPTCVLVAVTAEED--RAASDAVAAALRSRGVPTEVS 381

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             ++K FG Q++YA+RR  P     G          +KD+  G+++            A 
Sbjct: 382 PSAAK-FGKQIRYAERRGIPYVWFPGAEGDE-----VKDIRSGEQV-----------PAA 424

Query: 471 VAQITIPISEL 481
             + T P ++L
Sbjct: 425 AGEWTPPRADL 435


>gi|290992929|ref|XP_002679086.1| predicted protein [Naegleria gruberi]
 gi|284092701|gb|EFC46342.1| predicted protein [Naegleria gruberi]
          Length = 456

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 99/472 (20%), Positives = 176/472 (37%), Gaps = 41/472 (8%)

Query: 15  FADCPTKEIRIR--NRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPNKGVF 71
            AD    +   +  ++I+       + + +   +TP++E      + L  D D  +K +F
Sbjct: 1   MADFLPSQFSTKCYSKIIRVGEQTAKTFDYQFAQTPIVEERKLFERTLGADTDIISKEMF 60

Query: 72  SLQDDD---GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            L   D   G  + LR + TAP+ R V EN  +       Y  GP+FR E+   GR+RQF
Sbjct: 61  ILSSRDAIEGNKLCLRPEGTAPIMRSVIENALSTKQRI--YYYGPMFRYERPQKGRYRQF 118

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +GS    +D E   M    L  V   RND      N        E       +
Sbjct: 119 HQFGVEYLGSDHYQSDLESLEMAYQFLTNVLDGRNDVFQLEINSIGTLKERENYQHALLE 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
            + +   +    + L K     V++ + E               + +  D + + +    
Sbjct: 179 YVKKNKELFDQEENLSKDSRARVEIAIAENNPRRIWRILD----SKQDEDFIANLIEKHD 234

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              + +           E+       +   ++   +     KI+S+++RGL+YYT   +E
Sbjct: 235 MPQLAQFQS--------EENRKRFENVLLGLK---WLKIPYKINSSLIRGLDYYTHTTFE 283

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVALKSLES 367
                    +        ++  GGRYD L  +    Q +PA G++ G  RL + ++ LE 
Sbjct: 284 F--------KSNVIGAKSTILAGGRYDTLSQQLGANQQIPAVGWASGFERLSLIMEELEK 335

Query: 368 STNNIKEMGPVLITTM-------DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                +      +            D +      + +Q LR  GI   +      N   Q
Sbjct: 336 GNTQPQPEYIPKVFVSVVRGTNEAIDQEMSKFAIILSQQLRKQGIT--INYFEKGNLSKQ 393

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           LK A +    L II G  E   G + IK++  G++    +++     +  + 
Sbjct: 394 LKQAQQSKSLLTIIIGEDELKGGKISIKNMESGEQKKILLESLTDEIQESLQ 445


>gi|315503197|ref|YP_004082084.1| histidyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315409816|gb|ADU07933.1| histidyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 446

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 141/491 (28%), Positives = 205/491 (41%), Gaps = 66/491 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T +      GF +    +  I   +LD IR  +E YGF P+ET  +E  D L +  
Sbjct: 1   MSKPTPI-----SGFPEWTPAQRMIEQFVLDRIRATFELYGFAPLETRSVEPLDQLLRKG 55

Query: 61  PDEDRPNKGVFSL----QDDDG----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
                  K V+ L     D DG      + L +DLT P ARYV EN   + FP R Y+I 
Sbjct: 56  D----TAKEVYLLRRLQADADGPAGDDALGLHFDLTVPFARYVLENAGKLQFPFRRYQIQ 111

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GR+R+F+Q D+D V      A  E  M +        +      I +NNR
Sbjct: 112 KVWRGERPQEGRYREFLQADIDIVDRDTLPAHYEAEMPLVIGDALRSLPIPPVRIQVNNR 171

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           KI +G    IGL   +        LRA+DKLDK G  GV  LL              A  
Sbjct: 172 KICEGFYRGIGLTDAEAA------LRAVDKLDKIGPAGVTELLA-----------STAGA 214

Query: 233 TSEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           +  Q   ++S   I    +     +  L       ++G  EL  + E    + +      
Sbjct: 215 SEAQAKAVLSLAEISAPDASFADAVRGLGVSDPLLDEGVAELTAVVE--TAAAHAPGLCV 272

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
               I RGL+YYTG VYE  +             FGS+  GGRYD L S    +  P  G
Sbjct: 273 ADLRIARGLDYYTGTVYETQMIGYER--------FGSICSGGRYDNLASSGNVR-FPGVG 323

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG++RL+  L   E+ + +      VL+     +    +        LR+ G+  E+ 
Sbjct: 324 ISIGVTRLLGLLFGAEALSVSRSVPTCVLVAVTAEED--RAASDAVAAALRSRGVPTEVS 381

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             ++K FG Q++YA+RR  P     G          +KD+  G+++            A 
Sbjct: 382 PSAAK-FGKQIRYAERRGIPYVWFPGAEGDE-----VKDIRSGEQV-----------PAA 424

Query: 471 VAQITIPISEL 481
             + T P ++L
Sbjct: 425 AGEWTPPRADL 435


>gi|165932992|ref|YP_001649781.1| histidyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|189082306|sp|B0BWZ9|SYH_RICRO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|165908079|gb|ABY72375.1| histidyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 414

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 83/462 (17%), Positives = 175/462 (37%), Gaps = 53/462 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
           + +  RG  D    + ++ + I++  R++   YG+  + TP++EY+    + + +  D  
Sbjct: 4   QLQPLRGMKDLLPDDYKVHDYIINKARDVGVLYGYKQMSTPIVEYTKVFNRSMGESSDVI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D     ++LR + TA + R +  N      P + +  GPVFR ++   GR R
Sbjct: 64  SKEIYSFLDKSNDCVALRPEFTACIIRSIISNRLQHKLPLKFFSTGPVFRYDRPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + + +G+     DA+   +  D L+A+ I+++               L  +G + 
Sbjct: 124 QFHQLNYEYIGAKGAITDADTLKLAVDILKALEIEQDTTLE-----------LNSLGCNE 172

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             ++ ++ +V    D  ++   +  K+ L +         ++          ++  + + 
Sbjct: 173 SRRVYQQKLVEYLNDFKEQLSEES-KIRLSKNPMRILDSKSETDQKIIANAPVLSEYYTD 231

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +                  ++ F EL+   +++        +  I+  +VRGL+YY    
Sbjct: 232 ES-----------------KEYFEELIQYLDIL------GVKYSINPRLVRGLDYYCHTA 268

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E            K     ++  GGRYDGL       +             I  ++  +
Sbjct: 269 FEFTTK--------KLGSQSTILAGGRYDGLAKIMGNNDDVPAIGFAAGIERIALMREYD 320

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            S           +  +    +++         LRT  I   +   S      +++    
Sbjct: 321 VSEVK-------PVFVLPIGKNNICYALEIVDKLRTENIAIII--ESLGKIAKRMQRIFN 371

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            N    I  G  E++   L+IKDL K +E   +        +
Sbjct: 372 ENAQFIIFIGDEEQANNNLKIKDLKKEEEYIVDFAKALELLK 413


>gi|310287207|ref|YP_003938465.1| Histidyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|313139907|ref|ZP_07802100.1| histidyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|309251143|gb|ADO52891.1| Histidyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|313132417|gb|EFR50034.1| histidyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 464

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 132/499 (26%), Positives = 213/499 (42%), Gaps = 55/499 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +      GF +    E  +  R++D++R ++E  GF  IET  +E   SL K  
Sbjct: 1   MAKGASI-----SGFPEWLPSERVVEQRVIDTLRRVFELNGFIGIETRAVEQGSSLLKKG 55

Query: 61  PDEDRPNKGVF---SLQDDD-------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
                 +K ++    LQ+            + L +DLT PL+RYV E+   + FP + ++
Sbjct: 56  E----TSKEIYLLSRLQEVGHESDTPVNDRLGLHFDLTVPLSRYVVEHSGDLAFPFKRWQ 111

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSS--AETADAEMCMMMADTLEAVGIKR-NDYHI 167
           I  V+R E+   GRFR+F+Q D+D +G+    +  + E+ ++M   LE +         +
Sbjct: 112 IQKVWRGERPQEGRFREFVQADIDVIGNGDLPDHYEVELPLVMVSALEELRAFGLPKATV 171

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR-TDNSGDF 226
             NNRK+ +G    +GL   +       VLR IDKLDK G   V  LL +    D +   
Sbjct: 172 HANNRKLSEGFYRGLGLTDIE------GVLREIDKLDKIGADEVAKLLVDTCGADEAQAR 225

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
                      D        D   + H + +         +G + L +I +    +    
Sbjct: 226 ACLELAELTAADGKELADKFDALCAAHGIADDSDAYALARQGLDTLAMIVD--EAALIRP 283

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             +     I RGL+YYTG VYE  L              GS+  GGRYD L S+   +  
Sbjct: 284 GAVIADLKIARGLDYYTGSVYETFLDGAA--------SLGSICSGGRYDNLASQ-GNRKY 334

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG+SRL+  +     +  +      VL+   +      S   +    LR+ GI 
Sbjct: 335 PGVGLSIGLSRLVSYMLHSAGAHASRVCPASVLVAVWNEQD--RSAANLIANTLRSRGIA 392

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQ-----GTGERSRGMLQIKDLAKGKELSREIK 461
           A++   ++K  G Q+KYAD+   P          G    S    ++K++  G +   +  
Sbjct: 393 ADVAPTAAK-LGKQIKYADKLGIPYVWFPAGATDGDDTASD---EVKNIVTGDQ---QPA 445

Query: 462 NNESWREARV-AQITIPIS 479
           + +SW+   V A+ T+ I 
Sbjct: 446 DPKSWQPDTVYARQTVVID 464


>gi|189190292|ref|XP_001931485.1| histidyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187973091|gb|EDU40590.1| histidyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 431

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 108/434 (24%), Positives = 182/434 (41%), Gaps = 53/434 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P+G  D    +I +RN + D IRNI+  +G   I+TP  E    L +   ++    K
Sbjct: 5   IETPKGTRDWAGDDITLRNNVFDKIRNIFRLHGGTEIDTPAFERKSYLTEKYGED---TK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPGRFR 126
            ++ L +  G   +LRYDLT P AR++A N    +   + ++IG V+R ++     GR R
Sbjct: 62  LIYDLDEQGGAPCALRYDLTVPFARWLAMNN---IRTIKRFQIGKVYRRDQPSLEKGRMR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D  G   ++   +  ++     E     + D  I IN+R ILDG         
Sbjct: 119 EFFQCDFDYAGGQCDSMVPDAEVVCIAA-EVFEALQLDVVIRINHRLILDGFFSA----- 172

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL-TSEQIDIMVSFLS 245
                                   V+  + E   D +     G  L   ++   +   L+
Sbjct: 173 ----------------------PEVQKEMVEKGLDVNVATKLGQYLQRDKEAGTVPRLLT 210

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +  +        L+   +  +KG  E+ ++ + ++  G  +++++    + RGL+YYTG 
Sbjct: 211 LTSD-------PLLSANLDIQKGVEEMELLMQYLKAYGV-ADQVQFDLALARGLDYYTGV 262

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           +YE +L           V  GS+  GGRYD LVS F   N+P  G S GI R++  LK  
Sbjct: 263 IYEVMLPIRKTG-----VSVGSIAAGGRYDDLVSMFSSHNIPCVGISFGIDRILTILKD- 316

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                   +     I     D   + +     + +R AGI  +    + K    Q+  A+
Sbjct: 317 --GQQPKAQRIDSWIVIASSDKVLVQQRMALAREMRQAGISVDFDPKADKKPRKQIDIAE 374

Query: 426 RRNCPLAIIQGTGE 439
           +    +A +    E
Sbjct: 375 KSAATVAFLDLDDE 388


>gi|161527744|ref|YP_001581570.1| histidyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339045|gb|ABX12132.1| histidyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 427

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 107/456 (23%), Positives = 200/456 (43%), Gaps = 41/456 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ELPRG  D    E      + +  + +   YGF  +E  +LE   +L        R    
Sbjct: 2   ELPRGMKDFEANENSNIEHVRNHFKKLSNLYGFSFMEPSVLESLSTLETKSGPAIRD--E 59

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D   + ++LR+D T  L RY A    ++  P +    G VFR ++   GR+R F 
Sbjct: 60  IYYFKDKGDREVALRFDFTMGLTRY-ATAQKSMKLPAKISAFGGVFRYDEPQKGRYRYFH 118

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q DV+  G     ++AE+  + +   +++ +K  D  I IN+R +++  + KI    D  
Sbjct: 119 QWDVEVYGKKTLESEAEIIELTSRLFDSLLLK--DIVIDINHRNLVESYINKIFDITDSD 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +   +LRAIDK+ K     +     +   D +            +++ ++ F  +   
Sbjct: 177 --KVTDILRAIDKIAKKSKDEILTEFTKKGYDTA------------KLEKILEFSQVKG- 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
            ++ E+ ++        + ++EL  + + +   G ++ RI     IVRGL+YY+G V+E 
Sbjct: 222 -TISEVEKIFDT--TQLESWDELKQLFDSLENRGVSNVRINFG--IVRGLDYYSGMVFEV 276

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                      K    G++ GGGRYD L   F   ++ ATG + G+ R+I+ ++  +   
Sbjct: 277 F---------DKNSKLGALAGGGRYDTLTKAFGRDDIGATGVAGGVERIILTMQEQKIIP 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
             ++      +  +  + +        T +LR   I A++ L + +N   Q+  A     
Sbjct: 328 EILQN----RVAVVYINEEMQKVAHSITSLLRLNNIPADIDL-AGRNLKKQMDNAGT--A 380

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             +II G  E   G + + D+  GKE +  ++    
Sbjct: 381 RYSIIVGPQELENGNVVLHDMKDGKEGTISLEKLTE 416


>gi|313837763|gb|EFS75477.1| histidyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927356|gb|EFS91187.1| histidyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314972700|gb|EFT16797.1| histidyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328907441|gb|EGG27207.1| histidine--tRNA ligase [Propionibacterium sp. P08]
          Length = 454

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 128/478 (26%), Positives = 201/478 (42%), Gaps = 51/478 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +   GF +       + N +   +   +E +GF PI T  +E    L +        +
Sbjct: 3   RLKPLSGFPEFLPSGQMVENHVTRILEETFELHGFAPIHTRAVEPMRQLTRKGE----ID 58

Query: 68  KGVFSL----QDDDGQW-----ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           K V+ +     D          + L +DLT P ARYV EN   + FP R Y+I  V+R E
Sbjct: 59  KEVYVVDRLHADPHDSRSEKDCLGLHFDLTVPFARYVLENAGHLYFPFRRYQIQKVWRGE 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMM--MADTLEAVGIKRN--DYHIGINNRKI 174
           +   GR+R+F Q D+D VG        ++     M   LE +  +       + +NNRK+
Sbjct: 119 RPQEGRYREFTQADIDIVGDQTLAEHHDVETPLVMLSALERLHTELGFPTVTMHVNNRKL 178

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
            +G    +G+       + + VL+ +DK DK G   V+ LL +             +L+ 
Sbjct: 179 SEGFYRGLGIE------DPMAVLQRVDKYDKIGPDAVRELLVDE-----------LSLSD 221

Query: 235 EQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
           +     V+  SI       + ++ EL       E+G + L  +   V K      R+  +
Sbjct: 222 DVAAKCVALASIQSSDDSFIAKVRELGVTNEMLEEGLDSLNRVVAAVNK--AVPGRMVAN 279

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
             I RGL+YYTG VYE  L              GSV  GGRY+ L S  K    P  G S
Sbjct: 280 LKIARGLDYYTGTVYETELTG--------HESMGSVCSGGRYESLASDGKHV-YPGVGIS 330

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           +G++RL+  + S    +++      VL+     +    S+     Q LR+ GI  E+   
Sbjct: 331 LGLTRLLAPILSRGELSSSRSVPSAVLVAVNTEEDRVTSEA--VAQALRSRGIPCEVAPK 388

Query: 413 SSKNFGNQLKYADRRNCPLAIIQG-TGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           + K FG Q+K+ADRR  P     G      R    +KD+  G ++  +  +     E 
Sbjct: 389 ADK-FGKQIKHADRRGIPYVWFPGVEHTDRRDADTVKDIRSGDQVEADAASWNPPTED 445


>gi|148657293|ref|YP_001277498.1| histidyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148569403|gb|ABQ91548.1| histidyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 484

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 105/507 (20%), Positives = 193/507 (38%), Gaps = 74/507 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +  RG  D    E+ ++     +I  +   YG++PI+ P++E  D   + L +E     
Sbjct: 5   IDAVRGMRDILPSEVTVQRATAAAIERVLGAYGYEPIDLPIIEQRDLYLRKLGEELVGKV 64

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             F+    +G+ ++LR + TA + R           P R    GPVFRNE+     +RQF
Sbjct: 65  YEFTF---NGRDLALRPEWTASVLRAYVARMQDQPLPLRLRYAGPVFRNERPQRATYRQF 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G +A  ADAE   +  + L A G+ R  + + I +  ++  +L  +GL    
Sbjct: 122 TQIGVELIGGAAPRADAECLALACEGLVAAGVTR--FTVRIGHIGLIRSLLASLGLSERT 179

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV------- 241
           +      + R    L + G+  V+  L         D      +  ++ + ++       
Sbjct: 180 QGRLAWRLER----LREHGVAAVRAELDAHPASFPVDPALLDGIDDQRAEALLLHALREI 235

Query: 242 --------------------SFLSIDLEKSMHELYELVKGTIAGEKGFN----------- 270
                                    +  + + +  EL+      E G +           
Sbjct: 236 GVNLRFGTRPPEAIVGRLVRKLRRSESSEQIDQALELLDRLCRIEGGPDEALERAGALLR 295

Query: 271 --------ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                   EL  I  L          +K+   + RGL YYTG ++E      +       
Sbjct: 296 DYPVTGLEELHAILRLATAHSVAPECLKLDFGLGRGLHYYTGMIFEIYSDDGL------- 348

Query: 323 VVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                + GGGRYD LV+     Q+ PA GF+ G+ R++       +++       P ++ 
Sbjct: 349 ----QLCGGGRYDDLVNALGGRQSTPAVGFAYGLERVVA------AASPAAALPCPPVVM 398

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +  D  S        ++LR  G  A   +   +   + L+ ADRR      + G  ER+
Sbjct: 399 VVATDDGSYPYALEVARLLRAHGYTAMTDVRM-RGVSSNLRDADRRGVRFVAVVGADERA 457

Query: 442 RGMLQIKDLAKGKELSREIKNNESWRE 468
           +  +  +DL + +E+   + +    + 
Sbjct: 458 QRCMSWRDLERHEEMLIALTDIPPIKR 484


>gi|163788032|ref|ZP_02182478.1| histidyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159876352|gb|EDP70410.1| histidyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 575

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 114/389 (29%), Positives = 173/389 (44%), Gaps = 32/389 (8%)

Query: 82  SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
           +LRYDLT P ARYV ++ + I FP + Y++ PV+R ++   GRFR+F QCD D VGS + 
Sbjct: 217 ALRYDLTVPFARYVVQHQNEIEFPFKRYQMQPVWRADRPQKGRFREFYQCDADVVGSKSL 276

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
             + E   +      A+  K     I INNRKIL GI E IG          +    A+D
Sbjct: 277 LQEVEFVQLYDAVFSAL--KLEGVTIKINNRKILSGIAEVIGAQDK-----LIDFTVALD 329

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELV 259
           KLDK G + VK  +            +   ++ + I  +     L  D    +  L  ++
Sbjct: 330 KLDKIGEEKVKEEM------------RSKGISEDGISKLQPLFTLKGDFGSQVESLKSIL 377

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
             +  G KG  EL  I+  +      + ++++  T+ RGL YYTG ++E      V    
Sbjct: 378 NTSEIGLKGIEELEFINTAIANLKLKTAKLQLDVTLARGLNYYTGAIFEVSAPEGVK--- 434

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
                 GS+GGGGRYD L S F   +    G S G+ R+ + L+ L      I     VL
Sbjct: 435 -----MGSIGGGGRYDDLTSIFGKPDTSGVGISFGLDRIYLVLEELNLFPATITASTKVL 489

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
                               LR AG++AE++  S K    Q+ YA+RR  P  ++ G  E
Sbjct: 490 FINFGETEAM--TCLQAVTKLRQAGVKAELYPDSVK-MKKQMNYANRREIPYVVLVGEEE 546

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWRE 468
               +  +K++  G++            +
Sbjct: 547 VKAKLFTLKNMESGEQTKLPFDKLLEALK 575



 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 8  RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
          +  +P+G  D    E+  R+ I+++I+  ++ +GF PIETP  E S++L GK+  + DR 
Sbjct: 4  KPSIPKGTRDFNAAEVAKRSYIMETIKEQFQVFGFQPIETPSFENSETLMGKYGDEGDRL 63

Query: 67 NKGVFSLQDDDG 78
             +F + +   
Sbjct: 64 ---IFKILNSGD 72


>gi|227496201|ref|ZP_03926505.1| histidine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226834254|gb|EEH66637.1| histidine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 467

 Score =  181 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 125/476 (26%), Positives = 195/476 (40%), Gaps = 47/476 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
               GF +       I    +D++R+ +E +G+  IET  +E    L K        +K 
Sbjct: 15  STLSGFPEWLPAGRVIEQHFIDTLRHTFELHGYSGIETRAVEPLTQLTKKGE----TSKE 70

Query: 70  VFSL----QDDDGQW--------ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           V+ L     D   +         + L +DLT P ARYV +N   + FP + Y+I  V+R 
Sbjct: 71  VYLLSRLQADPSEREQEVDPAKQLGLHFDLTVPFARYVVDNAGVLHFPFKRYQIQKVWRG 130

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+   GRFR+F Q D+D VG  A     ++   +        +      I ++NRK+  G
Sbjct: 131 ERPQEGRFREFYQVDIDVVGDGALPLHYDVEAPLIMHEALSALPIPAVTIHVSNRKVAQG 190

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             + IG+  D    + + VLR +DKLDK G + V   L E                    
Sbjct: 191 FYQSIGIGDD----QLIEVLRVVDKLDKIGPEAVAAELVEAVGTTQAQAQAAL------- 239

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV-RKSGYNSNRIKISSTIV 296
             + +  S D +     + + + G    E     L  +S L+   +      I     I 
Sbjct: 240 -RLATICSPDPQAVREAVAQALDGAEPTELLATGLDELSGLLTTAARRRPGAIVADLKIA 298

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYTG VYE+ +              GSV  GGRYD L S  K    P  G SIG+S
Sbjct: 299 RGLDYYTGTVYESFMAGAE--------DLGSVCSGGRYDSLASNGKRT-FPGVGISIGLS 349

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+  + + E    +      VL+     D +  +        LR  GI  ++   ++K 
Sbjct: 350 RLLSRVIADELVEVSRAVPTAVLVAVT--DEEHRAASDAVADALRRRGIATDVAPTAAK- 406

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           FG Q+K+AD+R  P     G          +KD+  G++      + ++W  +   
Sbjct: 407 FGKQIKFADKRGIPFVWFPGAQGEED---SVKDIRSGEQT---PADAQTWVPSDPQ 456


>gi|297571403|ref|YP_003697177.1| histidyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931750|gb|ADH92558.1| histidyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 441

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 137/463 (29%), Positives = 200/463 (43%), Gaps = 49/463 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L      GF +       +   +LD++R  +E + F  IET  +E  + L    
Sbjct: 1   MAKIAPL-----SGFPEWLPAGRIVEQEVLDTLRKTFELHAFSSIETRAVEPVERLLSKG 55

Query: 61  PDEDRPNKGVFSLQ-----D-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
                 +K ++ L+     D  D   + L +DLT PLARYV EN   + FP R Y+I  V
Sbjct: 56  E----TSKEIYLLRRLQAGDAPDKDELGLHFDLTVPLARYVLENAGHLDFPFRRYQIQKV 111

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           +R E+   GRFR+FIQ DVD VG        E+ + +        +      I  +NRK+
Sbjct: 112 WRGERPQDGRFREFIQADVDVVGQDTLAFHHEVELPLVMVDALSKLPIPRVRIHASNRKV 171

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
             G  E IG+   ++       LR +DKLDK G + V  LL      +    +  A LT 
Sbjct: 172 AQGFYEAIGIDDVEQ------TLRIVDKLDKVGPEIVAELLER----DVNATSDQARLTL 221

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E        +  +      ++      +   ++G NELV + E    +      +     
Sbjct: 222 ELAQ-----ICTEDASFADKIASFGLHSDLLDEGLNELVALVEG--ANSLIPGSVVADLK 274

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           I RGL+YYTG VYE+++              GSV  GGRYD LVS  K    P  G SIG
Sbjct: 275 IARGLDYYTGSVYESVMEG--------HEDLGSVCSGGRYDSLVSDGKRT-FPGVGLSIG 325

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           +SR++  +      T + K    VL+   D      +  +     LR  GI  E+   S+
Sbjct: 326 VSRILARVIGQNVVTPSRKVPTAVLVAVNDESE--RAHAEKTAFELRKRGIATEVSPSSA 383

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           K FG Q++YADRR  P            G  Q+KD+  G++  
Sbjct: 384 K-FGKQIRYADRRGIPYVWF----STEEGE-QVKDIRSGEQSD 420


>gi|297626351|ref|YP_003688114.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922116|emb|CBL56684.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 443

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 128/479 (26%), Positives = 204/479 (42%), Gaps = 61/479 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +   GF +   +E  I   +LD++R  +E +GF  +ET  +E    L +         
Sbjct: 3   RPKPLSGFPEFLPRERLIELEVLDTLRETFELHGFSNVETRAVEPLSQLSRKGD----IT 58

Query: 68  KGVFSLQ-----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           K V+++      + D   + L +DLT PLAR+V E+   + FP R Y+I  V+R E+   
Sbjct: 59  KEVYTVSRLHADEHDKSELGLHFDLTVPLARWVLEHAGHLEFPFRRYQIQKVWRGERPQE 118

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMM--MADTLEAVGIKRN--DYHIGINNRKILDGI 178
           GR+R+F Q D+D VG     A  ++     M + LE +  +       + +NNRK+ +G 
Sbjct: 119 GRYREFTQADIDIVGRGELAAHHDIEAPLVMLEALEKLHDRIGLPPVLMHVNNRKLSEGF 178

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
              +G+       + L VL+ +DK DK G      LLG               L ++   
Sbjct: 179 YRGLGVE------DTLSVLQIVDKYDKIGADATVELLG-----------SELGLDTDTAR 221

Query: 239 IMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
             V+  SI    +  + ++  L       ++G +ELV + E    +     RI    +I 
Sbjct: 222 RCVALASIHSLDTGFVDQVRALGVSDPLLDEGLSELVTLIE--EANRRVPGRIIADLSIA 279

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYTG VYE  L              GS+  GGRYD L S  K    P  G S+G++
Sbjct: 280 RGLDYYTGAVYETQLVG--------HESMGSISSGGRYDSLASDGK-STYPGVGISLGVT 330

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RLI  L +    +        V++       ++          LR  G+  E+   + K 
Sbjct: 331 RLIAPLIAAGEFSVTRSVPTCVVVAV--DSEETRETAMDVAAALRARGVSCEVAPKADK- 387

Query: 417 FGNQLKYADRRNCPLAII---QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +G Q++YADRR  P        G          +KD+  G +   +  +   W  +R  
Sbjct: 388 YGKQIRYADRRGIPYVWFGGPIGE---------VKDIRSGDQ---QPADANIWMPSRDD 434


>gi|159117661|ref|XP_001709050.1| Histidyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157437165|gb|EDO81376.1| Histidyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 961

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 92/491 (18%), Positives = 179/491 (36%), Gaps = 39/491 (7%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             + P G  D    ++ +R   L  I ++++ +G   IETP++E    L     +E    
Sbjct: 432 IPQPPCGMRDLLPGQMVLRQAALSLITSVFQQHGAVCIETPVMESRSVLMGKYGEE---Q 488

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGPGR 124
           K ++++ D   + +SLRYDLT P ARY A + +  +      R YR       +      
Sbjct: 489 KLIYNVSDYGEEPLSLRYDLTVPFARYCATHREKSIKRYSIGRVYRRDKPVMEKGRFREF 548

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           ++  +    +    +   ADAE+ +++ + L A+     ++ I IN+R ILD  +   G+
Sbjct: 549 YQCDLDIVYEPNTQAPMAADAEVVVIVFEILHALRKSIRNFEILINHRGILDSAMAVAGV 608

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM---- 240
             + K      V   ID+LDK   + V+  + + +            L   ++       
Sbjct: 609 SDEQK----KAVCSCIDQLDKHSKEEVRDKIVKSKGLTPVVADTVLALIDFKLPTSPHMF 664

Query: 241 ----VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS--ST 294
                 F+S  +         +   +    +  + +    E +      ++ +       
Sbjct: 665 ANSPFDFVSTAIAALKELHASISLDSTLSSQFIDAISPRLEQLGLLFRYASLMCPQSLEY 724

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ--NVPATGFS 352
           +V       G  Y   + F            GS+ GGGRYD L+ +F+ +   + A G S
Sbjct: 725 MVLDFSLARGLDYYTGMVFEAKLISDHGERTGSIAGGGRYDELLGKFRARGDELCAVGGS 784

Query: 353 IGISRLIVALKSL--------------ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           IGI R+   L++                 S+  +       +        ++        
Sbjct: 785 IGIERIFAILEARQASLDGLATGDVEDGGSSCKLASAKRYDVYICGAPGCTIEARLEVAG 844

Query: 399 MLRTAGIRAEMFLGSS---KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
           +L   GI   M        K     +      +  LA+I G  E    ++ +K+L+  ++
Sbjct: 845 ILWGLGISVGMSCKEGCSQKLLKKDIDEGVAGHALLALIIGGDEIENRVINVKNLSTTEQ 904

Query: 456 LSREIKNNESW 466
           +         +
Sbjct: 905 VVVPFDEIGEY 915


>gi|320534388|ref|ZP_08034872.1| histidyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320133387|gb|EFW25851.1| histidyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 483

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 117/481 (24%), Positives = 193/481 (40%), Gaps = 46/481 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +       +    +D +R  +E +GF  I+T  +E    L K        +K V+ 
Sbjct: 15  SGFPEWLPAGHIVEQHFVDILRRTFELHGFSGIQTRAVEPLSELTKKGE----TSKEVYL 70

Query: 73  LQ----DDDG----------QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           L     D             + + L +DLT P ARYV +N   + FP + Y+I  V+R E
Sbjct: 71  LNRLQADPAESESESETDPRKQLGLHFDLTVPFARYVVDNAGLLTFPFKRYQIQKVWRGE 130

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GRFR+FIQ D+D VG  A     ++ + +        +      I ++NRK+  G 
Sbjct: 131 RPQEGRFREFIQADIDIVGDGALPLHHDVEVPLIMHEALSSLPVPAVTIHVSNRKVAQGF 190

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            + IG+  D  +     VLR +DKLDK G + V   L +    N+          + Q  
Sbjct: 191 YQSIGIDTDRLI----EVLRVVDKLDKIGPEKVAAELTQNVGVNAQQ--------AAQAL 238

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG-YNSNRIKISSTIVR 297
            + +    D +    ++   + G    E     L  ++ L+  +G      +     I R
Sbjct: 239 RLATITGTDGQDVSGQVLRALAGAEPSELLNEGLAELTALLEATGRRRPGAVVADLKIAR 298

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YYTG VYE+ +              GSV  GGRYD L +  +       G  I I  
Sbjct: 299 GLDYYTGTVYESFMAG--------HEDLGSVCSGGRYDSLATNGRRTFP---GVGISIGL 347

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
             +  + +      +    P  +     D    S        LR  G+ A++   ++K F
Sbjct: 348 SRLLARVIGEGLVEVSRSVPTAVLVAVTDEAHRSASDAIADALRARGVSADVAPSAAK-F 406

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           G Q++ AD+R+ P     G          +KD+  G+++  +    +   +    +ITI 
Sbjct: 407 GKQIRAADKRSIPFVWFPGADGAPD---SVKDIRTGEQVEADATTWQPPSDDAAPRITIS 463

Query: 478 I 478
            
Sbjct: 464 R 464


>gi|220912777|ref|YP_002488086.1| histidyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859655|gb|ACL39997.1| histidyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 457

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 129/476 (27%), Positives = 196/476 (41%), Gaps = 51/476 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            GF +   +E  +   +LD++R ++E +GF  IET  +E    L +        +K V+ 
Sbjct: 8   SGFPEWLPEERLVEIHVLDTLRRVFELHGFASIETRSVETVGQLLRKGE----IDKEVYG 63

Query: 72  --SLQDDDGQW-----------ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              LQ+D+G+            ++L +DLT P ARYV EN   + FP R Y+I  V+R E
Sbjct: 64  LSRLQEDEGENPVKGGKADPHALALHFDLTVPFARYVVENAGYLAFPFRRYQIQKVWRGE 123

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR R+F Q D+D VG        ++ + +        +   D+ + +NNRK+ +G 
Sbjct: 124 RPQEGRAREFTQADIDVVGDGELPFRYDVEIALVIAEALSALPIPDFQLRVNNRKLAEGF 183

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            + IG      L +   VLR+IDKL+K G   V  LL                 T EQ  
Sbjct: 184 YQGIG------LTDTAGVLRSIDKLEKIGPAKVAELLK-----------SELGATDEQAQ 226

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             +    I              G            +   +         ++    +I RG
Sbjct: 227 KALQLAGIRTGDLSFVAQVRALGVSNDLLEEGLSELEQVIDAAVQRAPGKVLADLSIARG 286

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG V E +L              GS+  GGRYD L S+   +  P  G SIG++RL
Sbjct: 287 LDYYTGTVVETVLLG--------HEQLGSICSGGRYDALASK-GNRKFPGVGLSIGVTRL 337

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +  + S E          P  +       DS    Q     LR+ GI  E+   + K FG
Sbjct: 338 VSRILSQEL--AKASRSVPTAVLVALSHDDSWGAAQDVAAQLRSRGIPTEVAAKAEK-FG 394

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            Q+K+ADRR  P            G  Q+KD+  G+++    +         V Q+
Sbjct: 395 KQIKFADRRGIPFVWFTDDD----GTHQVKDIRSGEQVVAAPETWMPPAADLVVQV 446


>gi|57167761|ref|ZP_00366901.1| histidyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020883|gb|EAL57547.1| histidyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 408

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 94/459 (20%), Positives = 173/459 (37%), Gaps = 56/459 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +I+ +   + +NYGF+ I TP LE S    + + +  D   
Sbjct: 2   INALKGMKDLSDKDALYYEKIIKTCEKVAKNYGFNFINTPHLEQSILFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D  G  + +R + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFTDKGGNEVCMRPEGTAGVVRAYIEKKLDKNISVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V++ G  +   DA + +M+ +    +GI        +   + L    +++    
Sbjct: 122 EFHQFGVESFGIPSVYEDASIILMLVEIFSRLGIDFKLQLNSLGCSQCLPKYRDELVEFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D K           D L +  L  +++L  + + ++  +  + A L       +++ L  
Sbjct: 182 DSKEG------FCEDCLRRKNLNPIRVL--DCKNEHCQNLLENAPL-------LINNLCT 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K    L +++K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCQKDFETLQQILKDNGVKFELDSKL-----------------------VRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G++    GF++GI R+I  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLGGKSGYGIGFAMGIERIITILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   + K       LR    +  +    ++     L+  D+
Sbjct: 316 ELEKRE------GIYLCAMDEIYIPKLLQIATKLRKK-HKVILSY-EARKLAKHLENGDK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            N    +  G  E     L  K+L    E   +I + E+
Sbjct: 368 INSKHFLCMGENEAKSESLFYKNLENKDEKVIKISDLEN 406


>gi|291301288|ref|YP_003512566.1| histidyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290570508|gb|ADD43473.1| histidyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 445

 Score =  180 bits (455), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 128/486 (26%), Positives = 207/486 (42%), Gaps = 62/486 (12%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +       +  R++  +   +E YGF  + T  +E  D L +        +K V+ 
Sbjct: 8   SGFPEFLPAGRVVEQRVIAKLAETFELYGFASVNTRSIEPMDQLLRKGE----TSKEVYV 63

Query: 73  L------QDDDGQW-ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           L       +  G     L +DLT P ARYV EN   + FP R Y+I P +R E+   GRF
Sbjct: 64  LRRLQAEAESGGDTGFGLHFDLTVPFARYVLENAGKLQFPFRRYQIQPCWRGERPQDGRF 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F Q D+D V         E+ + +        +   D  I +NNRK+  G  + +GL 
Sbjct: 124 REFWQADIDIVDRDELPTHYEVEIPLVVGDALRSLPIPDVRIHVNNRKLSQGFYQGLGLS 183

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-- 243
                 + +  +RA+DK+DK G  GV  LL E                 +Q+   ++   
Sbjct: 184 ------DPMGAIRAVDKIDKVGPAGVAKLLSEE-----------LGAADDQVKACLALAE 226

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           ++ D E  +  +  L       ++G +EL  +      +      ++    I RGL+YYT
Sbjct: 227 IATDDESFVDAVRALGVSDPLLDEGLDELATVIA--TGAEDAPGLLRADMRIARGLDYYT 284

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G VYE  +              GSV  GGRYD L S  K  + P  G SIGISR++V L 
Sbjct: 285 GTVYETFM--------DGYGRLGSVCSGGRYDNLASDGK-NSFPGVGISIGISRILVPLV 335

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           S            P  +     D+DS          LR+ G+  E+   +++ +G Q+K+
Sbjct: 336 SEGKLGAT--RDVPTCVLVALPDTDSRRDCDRIAAKLRSRGVATEVAP-AAQKYGKQIKF 392

Query: 424 ADRRNCPLAIIQGTGERSRGM--LQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           A+RR  P  +       S G    +I+D+  G++ + +I +              P ++L
Sbjct: 393 AERRGIPFVLFP-----SSGTDGHEIRDIRSGEQSTVDIDSWLP-----------PTTDL 436

Query: 482 VSTVKK 487
            + +++
Sbjct: 437 RAEIQR 442


>gi|50365183|ref|YP_053608.1| histidyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81695673|sp|Q6F199|SYH_MESFL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|50363739|gb|AAT75724.1| histidyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 457

 Score =  180 bits (455), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 101/472 (21%), Positives = 179/472 (37%), Gaps = 56/472 (11%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K   +  + PRG  D      +  N + +  R +   + +  I TP+ E  +   + + 
Sbjct: 38  AKGDFM-IQKPRGTQDLFLNNSKEWNAVEEKFRKVLNLFNYGEIITPMFESKELFVRGVG 96

Query: 62  D-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNE 118
           D  D  +K ++   D  G+   LR + TAP  R + EN   I        + IGP+FR E
Sbjct: 97  DSSDIVSKEMYEFTDRKGREYVLRPEGTAPTVRALIENKLYIQENLPYKTFYIGPIFRYE 156

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR+RQF Q  V+  G  + + D E+  +    L+ + I ++     I     L   
Sbjct: 157 RPQAGRYRQFNQLGVETFGIDSISHDVELISLGQSFLKELKINKD----VIVEMNYLISG 212

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E+     + K    L      D   +     +++L  +                     
Sbjct: 213 NERKEYELELKKYLNLFDDLCSDCEIRINKNVLRVLDCK--------------------- 251

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                  ID  K        +    A ++    L    + +++ G      KI+  +VRG
Sbjct: 252 -------IDGNKFAEAPKMTL---FASQENKERLNKTFDQLKQLG---IEAKINFNLVRG 298

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG V+E           +      ++  GG Y+ LV    G N+PA+GF+IGI R+
Sbjct: 299 LDYYTGLVFEF----------KNIKTDQAIIAGGSYNNLVEELGGPNLPASGFAIGIERI 348

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++ L   E     + +   + +  +    D+           RTA ++ +    + KN  
Sbjct: 349 MMILSDQEI---KVADEDELDLFIIPLSDDAQFLTNKLLLEARTANLKVDTNW-NIKNLK 404

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              K A+R      +I G    +  +  IKD   G+    + K+   + +  
Sbjct: 405 AGFKSAERLKSKNIVIIGENSINSDIYAIKDQKSGETKELKFKDIVKYLKGE 456


>gi|113474434|ref|YP_720495.1| ATP phosphoribosyltransferase regulatory subunit [Trichodesmium
           erythraeum IMS101]
 gi|110165482|gb|ABG50022.1| ATP phosphoribosyltransferase regulatory subunit [Trichodesmium
           erythraeum IMS101]
          Length = 517

 Score =  179 bits (454), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 98/525 (18%), Positives = 193/525 (36%), Gaps = 76/525 (14%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
             ++ E   G  D      +I  +I   + + +E+YG+ PI+ PL+EY++   K   ++ 
Sbjct: 2   QTIKVERVTGVNDILPSTYQIDQQIKSILSSNFESYGYRPIDVPLIEYTELYLKKSGEDI 61

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
                ++     + + + LR + TA + R   +N   +  P R Y +GPVFR E+    +
Sbjct: 62  I--SRLYDFIYRN-RRLCLRPEFTASVVRAYLDNLQELPLPVRLYYMGPVFRYEQPQKEK 118

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           + QF Q  ++ +G++   AD E+  M    L+ +G+        I +  +L+  L+ + L
Sbjct: 119 YGQFTQMGIELIGATGAIADGEIISMACQGLDRLGLTEYQ--TFIGHVGVLNNFLDHLQL 176

Query: 185 H--------------------------------------GDDKLNERLIVLRAIDKLDKF 206
                                                    ++L+      +  D L   
Sbjct: 177 DTRLRSFLLTQMETLRIEGKEIVESRLSEIYPAFKKNNFLAEQLDTNTTTKKITDILQNL 236

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM----------------------VSFL 244
                +  + +     + + T       E +D +                      +S L
Sbjct: 237 EENEARTAIFKLLESMNIELTST-RTPEEIVDRLLIKIKHQDQTKELNQALEFMTELSQL 295

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + +    E+ +L+      + G  EL  I + +     + NRI +   I RGL+YYTG
Sbjct: 296 KGEPQAIFKEIKKLLSAYGIDDYGLAELQDILKSLEAFNIDKNRISLDLGISRGLQYYTG 355

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E            K  V   + GGGRYD LV    G+               +  + 
Sbjct: 356 MVFEIY--------DSKLGVERKLCGGGRYDDLVVSLGGKQETPAT-GFSYLMEELRKEL 406

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E +  +      V    +    +  S      + LR+ G+R E  +   ++  + ++Y 
Sbjct: 407 TEKAHLSFNNYQFVEALVVGLTREDYSDSVRVAEKLRSLGLRIETDVI-GRDIQSNIEYG 465

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +++     II  + E+  G + +++L  G++   E+         
Sbjct: 466 NQQKISFLIIVNSTEKKGGKVLLQNLDSGEQKKLELHEVVHQVRN 510


>gi|325283190|ref|YP_004255731.1| Histidyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314999|gb|ADY26114.1| Histidyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 430

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 102/480 (21%), Positives = 180/480 (37%), Gaps = 74/480 (15%)

Query: 10  ELPRGFADCPTKEI---------RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF- 59
           + P+G  D                    I      + E  G   I TP+ E +D + +  
Sbjct: 3   KRPKGTKDHLPAGSPGLSPDAAASAHAHIHRIAAQVLERAGAQFIATPMFEEADLVQRGV 62

Query: 60  LPDEDRPNKGVFSLQ---DDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVF 115
               D   K +F++    +  G    LR + TAP+ R   EN    +  P + +  GP+F
Sbjct: 63  GGSTDIVRKEMFTVYYAGEHGG--YVLRPEGTAPIVRAYLENGLKQLGAPLKLWTHGPMF 120

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY----HIGINN 171
           R E    GR RQF Q D + +GSS   ADAE   +M D + A+G+K             +
Sbjct: 121 RAENVQKGRLRQFHQVDYECLGSSDALADAEAIALMWDIVTALGLKGVSIQLGSIGDPQD 180

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
           R   +  L  +     + L+E        D  D+     +++L  +  +D        A 
Sbjct: 181 RAAYNEYLRGLFTPHLEGLSE--------DSKDRLTRNPMRILDSKSESDQ-------AI 225

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           +    +  M+ FL  +      ++ + +                              + 
Sbjct: 226 IAELSVRPMLDFLGAEAAAHFEQVRQHLTD-----------------------WGVPFET 262

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATG 350
             +IVRGL+YY    +E           Q      ++GGGGRYDGL      ++  P  G
Sbjct: 263 DPSIVRGLDYYRRTAWEL--------HHQGIGAKSALGGGGRYDGLAQELGAKDEVPGIG 314

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEM 409
           ++ GI R+++A++       +        +     D + ++      +  R  AG  A+ 
Sbjct: 315 WAFGIERILLAMEDEGL---SFPAAVGPALYLAALDDEHVALVAALARQARQVAG--ADF 369

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                +  G   K ADRR    A + G+ E ++  L +K+L+ G++++        + + 
Sbjct: 370 SF-RRRGAGQAFKEADRRGARWAAVIGSNEAAQQRLTLKNLSSGEQVAVPFDGLNIFLKE 428


>gi|251794967|ref|YP_003009698.1| histidyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247542593|gb|ACS99611.1| histidyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 427

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 105/464 (22%), Positives = 194/464 (41%), Gaps = 39/464 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +  +G  D   KE  +R ++   ++ ++E Y ++ +E+ +L   + L       D   K 
Sbjct: 2   QNVKGTYDFFGKEQAVRQKVRSVLQEVFELYDYESMESTVLHELELLTSKYAGGDEILKE 61

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++   D   + + LRYDLT PLA+ +A N   I  P R Y IG VFR+     GR R+F+
Sbjct: 62  MYRFTDQGARKLGLRYDLTIPLAKVMALN-PGIKLPYRRYEIGKVFRDGPVKRGRLREFL 120

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           QCDVD VG +   A+AE+ ++  +  + + I      +  NNR+ L  IL+ +G+  +D 
Sbjct: 121 QCDVDMVGVAGPEAEAELMLIAVEVFKRLDIP---VTLRWNNRRFLSEILDAVGVPAEDS 177

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           L+  L     +DKL+K G  GV     +              ++   +D +   +++   
Sbjct: 178 LSVMLT----LDKLEKIGSDGVLKEWRDK------------GISGPTVDEIAELIAMSGP 221

Query: 250 K-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
             S+      +K +    +         + +      S+  +    + RGL +YTG VYE
Sbjct: 222 SFSLLADRYGLKESRGAAEIRA-----LQTLIDKLSLSDICRFDPFLSRGLSFYTGTVYE 276

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                 +            +G GGRYD ++ +  G    A         +   ++ +   
Sbjct: 277 IFDAGGLYASS--------IGSGGRYDAIIGKLIGSEDMAYPAVGLSFGMESIMEMIRDR 328

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                    V+++      D++ +  M    LR+ GI+  M   + +     L   + R+
Sbjct: 329 PIPAPTPKVVVLSI----GDTMGEALMAATALRSNGIQTGMEP-AGRKLKKALASLESRS 383

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              A++ G  E   G +++KD+   +E +  +       E   A
Sbjct: 384 IRYALLIGEEEVRTGQVRLKDMKAREEYAVPLDEALYLLEKNDA 427


>gi|46397798|sp|Q9ZDL9|SYH_RICPR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|292571908|gb|ADE29823.1| Histidyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 413

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 89/463 (19%), Positives = 171/463 (36%), Gaps = 54/463 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
             +  RG  D    + +I N I++  R++   YG+  + TP+LEY+    + + +  D  
Sbjct: 4   NLQPLRGMKDLLPNDYQIHNYIINKARDVGALYGYKQMSTPILEYTKVFNRSMGESSDVM 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D     ++LR + T+ + R    N      P + +  GPVFR ++   GR R
Sbjct: 64  SKEIYSFVDKSNNAVALRPEFTSGIIRSFISNGLQHKLPLKFFSTGPVFRYDRPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + + +G+     DAE   +  D L+A+     D  + +N+    +  +       
Sbjct: 124 QFHQLNYEYLGAKGAITDAETVKLAVDILKAL-EIEEDTTLELNSLGCHESRI-VYQQKL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            + LN+    L    +L       +++L  +   D                 I+  + + 
Sbjct: 182 VEYLNDFKDQLSGESRLRLN-KNPMRILDSKSEIDQK---------IIAHAPILSEYHTN 231

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + +K                   +EL    +++        +  ++  +VRGL+YY   V
Sbjct: 232 ESKKYF-----------------DELQKYLDIL------GIKYSVNPRLVRGLDYYCHTV 268

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E            K     ++  GGRYD L       +V A GF+ GI R+ +      
Sbjct: 269 FEFTTK--------KLGSQSTILAGGRYDMLSRIMGNYDVHAIGFAAGIERIAL------ 314

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                 K      +  +    +++         LR   I + +          +++    
Sbjct: 315 --MREYKISVIKPVFVLPIGKNNICYALDIVDKLRLQNIVSIIDPIG--KIAKRIQRVLN 370

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +    I  G  E+    L+ KDL   KE   + +      + 
Sbjct: 371 EDAKFIIFIGDEEKMNNNLKFKDLKNQKEYIIDFEKVLELLKQ 413


>gi|315604275|ref|ZP_07879341.1| histidine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313981|gb|EFU62032.1| histidine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 448

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 123/463 (26%), Positives = 197/463 (42%), Gaps = 49/463 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +       I   +LD +R ++E +GF  IET  +E  + L          +K ++ 
Sbjct: 7   SGFPEWLPAGRIIETHVLDELRRVFELHGFAGIETRAVETLEQLQAKGE----TSKEIYV 62

Query: 73  LQDD------------DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           L D               + + L +DLT P ARYV EN + + FP + Y+I  V+R E+ 
Sbjct: 63  L-DRLQASRNPGAKASKERGMGLHFDLTVPFARYVVENANDLDFPFKRYQIQKVWRGERP 121

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFR+F Q D+D VG+       E+ + +        +      + +NNRK++ G+ E
Sbjct: 122 QEGRFREFTQADIDVVGNGELPFHFEVDLPLVMAEALNNLPIPPVRVLVNNRKVVQGVCE 181

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +G+   +        LR +DK+DK G +GV   L +            A   +  +  M
Sbjct: 182 SLGVTDVEAA------LRGLDKIDKIGPEGVASELADSGI---------AGEQASVLLRM 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
               S D E+    L EL       E+G  EL+ + +    +      +     I RGL+
Sbjct: 227 AQIRSADSEEVRSRLGELGVRGDLLEEGLGELIRLLD--TANARMPGTVLADLKIARGLD 284

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYE        +E +     GS+  GGRYD L    K    P  G SIG+SRL+ 
Sbjct: 285 YYTGSVYE--------SEIEGHEDLGSICSGGRYDSLAKDGKRT-YPGVGLSIGVSRLVS 335

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +  + +         P  +     +     + +     LR+ GI  ++   ++K FG Q
Sbjct: 336 RM--ISAPMVRSSRKVPTAVVVAVTNEAQRERSEAIAASLRSRGISTDVAPSAAK-FGKQ 392

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +K+ADRR  P     G          +KD+  G+++  +    
Sbjct: 393 IKFADRRGIPYVWFPGEEGAPD---TVKDIRSGEQVEADPSTW 432


>gi|222524658|ref|YP_002569129.1| histidyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|222448537|gb|ACM52803.1| histidyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 483

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 104/501 (20%), Positives = 171/501 (34%), Gaps = 74/501 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +L RG  D    E      I   +      YG+  I+TP++E+ +   + L ++     
Sbjct: 7   IDLVRGMRDVHPAEFAHGRYIQRILEQTMAGYGYQMIDTPVIEHRELYLRKLGEDLVGKV 66

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             FS     G+ ++LR + TA + R    +      P R    GPVFR E+     +RQF
Sbjct: 67  YEFSF---GGRDLALRPEWTASVLRAYVASMQDQPLPLRLSYAGPVFRYERPQRYTYRQF 123

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G     ADAE+  +    L+AVG+   +Y + I +  +   +L +  L    
Sbjct: 124 TQVGGEIIGGLPPRADAEVIALACAGLQAVGVT--EYTVRIGHIGLARELLSRFALPERT 181

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +      + R    L   G+  V+  +              A L  EQ    +  +   +
Sbjct: 182 RGLLVWSLER----LRAEGIAPVRERVLANLGTPPEGLELPAGLDDEQAARWLERVLTAM 237

Query: 249 EKSM--------------------------------------------HELYELVKGTIA 264
           +  +                                                 ++     
Sbjct: 238 QIDLRTGTRSPAEVLQRLLRTLRRADEQPLVEAALEQLARLAAISGPPEHAIPMLADLPG 297

Query: 265 GE-KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPV 323
            E   F EL  I  L+      + R+ I   + RGL YYTG ++E               
Sbjct: 298 SESAAFRELQAILNLLAAYHIPAERVVIDGALGRGLHYYTGLIFEIY-----------DR 346

Query: 324 VFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
               + GGGRYD LV      Q  PA GF+ G       L+ + ++        P  +  
Sbjct: 347 EGNQLCGGGRYDDLVGALGGRQATPAVGFAYG-------LERVTAAATTGSGESPTTVLV 399

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                D         + LR  G    + +   ++  + L+ A RRN    +I G  ER+ 
Sbjct: 400 AAVSDDDYPYALHVAERLRAGGYIVVLDV-RGRSVKDNLRDATRRNYSAVVIVGAAERAG 458

Query: 443 GMLQIKDLAKGKELSREIKNN 463
             +  +DLA   E    I   
Sbjct: 459 EYVIWRDLATRSERQIPIAML 479


>gi|305432215|ref|ZP_07401379.1| histidine--tRNA ligase [Campylobacter coli JV20]
 gi|304444758|gb|EFM37407.1| histidine--tRNA ligase [Campylobacter coli JV20]
          Length = 408

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 93/459 (20%), Positives = 170/459 (37%), Gaps = 56/459 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +I+ +   + +NYGF+ I TP LE S    + + +  D   
Sbjct: 2   INALKGMKDLSDKDALYYEKIIKTCEEVAKNYGFNFINTPHLEQSILFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D  G  + +R + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFTDKGGNEVCMRPEGTAGVVRAYIEKKLDKNISVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V++ G  +   DA + +M+ +    + I        +   + L    +++    
Sbjct: 122 EFHQFGVESFGIPSVYEDASIILMLVEIFSRLSIDFKLQLNSLGCSQCLPKYRDELVEFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D K           D L +  L  +++L      D   ++ +      E   ++++ L  
Sbjct: 182 DSKEG------FCEDCLRRKNLNPIRVL------DCKNEYCQNL---LENAPLLINNLCT 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K    L +++K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCQKDFETLQQILKDNGVKFELDSKL-----------------------VRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G++    GF++GI R+I  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLGGKSGYGIGFAMGIERIIAILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   + K       LR    +  +    ++     L+  D+
Sbjct: 316 ELEKRE------GIYLCAMDEIYIPKLLQIATKLRKK-HKVILSY-EARKLAKHLENGDK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            N    +  G  E     L  K+L    E   +I + E+
Sbjct: 368 INSKHFLCMGENEAKSESLFYKNLENKDEKVIQISDLEN 406


>gi|183601794|ref|ZP_02963164.1| histidyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241190708|ref|YP_002968102.1| histidyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196114|ref|YP_002969669.1| histidyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183219400|gb|EDT90041.1| histidyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240249100|gb|ACS46040.1| histidyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250668|gb|ACS47607.1| histidyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793697|gb|ADG33232.1| histidyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 448

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 128/470 (27%), Positives = 207/470 (44%), Gaps = 42/470 (8%)

Query: 25  IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDDGQW- 80
           +  R++D++R ++E  GF  IET  +E   SL K        +K ++    LQ+   +  
Sbjct: 2   VEQRVIDTLREVFELNGFIGIETRAVEQGSSLLKKGE----TSKEIYLLSRLQEVGHESD 57

Query: 81  ------ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
                 + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D
Sbjct: 58  IPVEQRLGLHFDLTVPLSRYVVEHSGALPFPFKRWQIQKVWRGERPQEGRFREFVQADID 117

Query: 135 NVGSSAETADAEM--CMMMADTLEAVGIKR-NDYHIGINNRKILDGILEKIGLHGDDKLN 191
            VG     +  E+   ++M + LE +         +  NNRK+ +G    +GL   +   
Sbjct: 118 VVGDGTLPSHYEVELPLVMVNALERLREFGLPKATVHANNRKLSEGFYRGLGLTDIE--- 174

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL-SIDLEK 250
               VLR IDKLDK G Q V  LL E              L     +     +   +   
Sbjct: 175 ---GVLREIDKLDKIGPQAVTDLLVETCGATEAQANACLELAQVTAEDGQELIEKFNGLC 231

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +H +          ++G + L +I +           +     I RGL+YYTG VYE  
Sbjct: 232 EIHHIPFDGDEYAMAKEGLDTLSMIID--EARRIRPGSVMADLKIARGLDYYTGSVYETF 289

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           L              GS+  GGRYD L ++   +  P  G SIG+SRL+  +     +T 
Sbjct: 290 LEGAS--------DLGSICSGGRYDNLATQ-GNRKYPGVGLSIGLSRLVSYMLHRAGATA 340

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
           +      VL+     D ++          LR+ GI A++   ++K  G Q+KYAD+   P
Sbjct: 341 SRMSPACVLVAV--WDEENRGDSNAIANTLRSRGIAADVAPTAAK-LGKQIKYADKLGIP 397

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV-AQITIPIS 479
                     + G  ++K++  G +      + +SW+   V AQ T+ I+
Sbjct: 398 YVWFPNENPENDGSDEVKNIITGDQ---RPADAQSWQPDTVYAQQTVSIN 444


>gi|15604177|ref|NP_220692.1| histidyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|3860869|emb|CAA14769.1| HISTIDYL-TRNA SYNTHETASE (hisS) [Rickettsia prowazekii]
          Length = 416

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 89/463 (19%), Positives = 171/463 (36%), Gaps = 54/463 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
             +  RG  D    + +I N I++  R++   YG+  + TP+LEY+    + + +  D  
Sbjct: 7   NLQPLRGMKDLLPNDYQIHNYIINKARDVGALYGYKQMSTPILEYTKVFNRSMGESSDVM 66

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D     ++LR + T+ + R    N      P + +  GPVFR ++   GR R
Sbjct: 67  SKEIYSFVDKSNNAVALRPEFTSGIIRSFISNGLQHKLPLKFFSTGPVFRYDRPQAGRQR 126

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q + + +G+     DAE   +  D L+A+     D  + +N+    +  +       
Sbjct: 127 QFHQLNYEYLGAKGAITDAETVKLAVDILKAL-EIEEDTTLELNSLGCHESRI-VYQQKL 184

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            + LN+    L    +L       +++L  +   D                 I+  + + 
Sbjct: 185 VEYLNDFKDQLSGESRLRLN-KNPMRILDSKSEIDQK---------IIAHAPILSEYHTN 234

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + +K                   +EL    +++        +  ++  +VRGL+YY   V
Sbjct: 235 ESKKYF-----------------DELQKYLDIL------GIKYSVNPRLVRGLDYYCHTV 271

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E            K     ++  GGRYD L       +V A GF+ GI R+ +      
Sbjct: 272 FEFTTK--------KLGSQSTILAGGRYDMLSRIMGNYDVHAIGFAAGIERIAL------ 317

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                 K      +  +    +++         LR   I + +          +++    
Sbjct: 318 --MREYKISVIKPVFVLPIGKNNICYALDIVDKLRLQNIVSIIDPIG--KIAKRIQRVLN 373

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +    I  G  E+    L+ KDL   KE   + +      + 
Sbjct: 374 EDAKFIIFIGDEEKMNNNLKFKDLKNQKEYIIDFEKVLELLKQ 416


>gi|301630415|ref|XP_002944317.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like, partial
           [Xenopus (Silurana) tropicalis]
          Length = 478

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 100/404 (24%), Positives = 170/404 (42%), Gaps = 27/404 (6%)

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G+ +SLRYDLT P ARY+A N    +             N     GR+R+F QCD D  G
Sbjct: 91  GELLSLRYDLTVPFARYLAMNKINNIKRYHIA-KVYRRDNPAMTRGRYREFYQCDFDIAG 149

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                     C+ +   + +  +   ++ I +N+R+ILDG+    G+       +   + 
Sbjct: 150 QFDPMIPDAECLKIVHEILS-ELDLGEFLIKVNDRRILDGMFAVCGVPDS----KFRTIC 204

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL-- 255
            ++DKLDK   + VK            +      L  E  D +  ++  +    + E   
Sbjct: 205 SSVDKLDKTPWEDVK-----------NEMVGEKGLAPEAADQIGDYVQRNGGLDLIEQLI 253

Query: 256 -YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL--- 311
               +       +G +++  + + +       +++    ++ RGL+YYTG +YEA+L   
Sbjct: 254 NDPKLSQNKLALEGLSDMKTLFQYLELFAVT-DKVSFDLSLARGLDYYTGVIYEAVLVQN 312

Query: 312 -GFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                 +  ++ V  GSV GGGRYDGL  +   KG+ VP  G SIGI R+   ++    +
Sbjct: 313 EPQQQNDHAEEAVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEA 372

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
           +          +         L +       L  AGI+AEM    +    NQL+Y +   
Sbjct: 373 SEEKIRTTETQVLVAAAQKKLLEERMKLISELWNAGIKAEMLYKKNPKLLNQLQYCEETG 432

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            PL  I G  E   G+++++ +A  +E+    +N       R  
Sbjct: 433 IPLVAIIGEQELKDGVVKLRVVATREEVDVARQNLVEEIHKRTQ 476


>gi|4261708|gb|AAD14008.1|S68230_1 histidyl tRNA synthetase [Caenorhabditis elegans]
          Length = 514

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 179/423 (42%), Gaps = 48/423 (11%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLP 61
           K  K   +  +G  D    +  +RN +L ++   +  YG + I+TP+ E  D L GK+  
Sbjct: 5   KPGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGE 64

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH- 120
           +     K V+ LQD  G+ +SLRYDLT P ARY+A N    +     Y+I  V+R ++  
Sbjct: 65  EG---GKLVYDLQDQGGELLSLRYDLTVPFARYLAMNK---ITNITRYQIAKVYRRDQPV 118

Query: 121 -GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F QCD D  G             +  +      K   + +      IL+G+ 
Sbjct: 119 MSRGRYREFYQCDFDIAGQYDLMLPELSVWELLMSCSR-NWKLESFSLISITVLILEGMF 177

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+   D       +  ++DKLDK   + V+            +      LT EQ   
Sbjct: 178 AVSGIPAKD----FKTICSSVDKLDKTPWEDVE-----------QEMINEKFLTKEQTGK 222

Query: 240 MVSFLSIDLEKSMHELYELVKG---------TIAGEKGFNELVVISELVRKSGYNSNRIK 290
           +   +  +   ++  ++  +K              +KG  EL V+ E +   G  + R +
Sbjct: 223 LGELVRFESSIAISTIWNFLKKCHNLPDLGQNDKFKKGAEELKVLIEYLNVDGVTTVRYE 282

Query: 291 ISSTIVRGLEYYTGCVYEAILG--------FPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
            S  + RGL+YYTG +YEA+              +   +PV  GSV  GGRYDGLV  F 
Sbjct: 283 PS--LARGLDYYTGAIYEAVAPKALEGTAVENSEDTAGQPVGVGSVAAGGRYDGLVKMFD 340

Query: 343 -GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
              NVP  G S GI RL   +++ +             +       + +   +   +MLR
Sbjct: 341 SKANVPCCGVSFGIERLFAIMEARQKVAI---RTTQTEVYVASAQKNLVRDRKKLVKMLR 397

Query: 402 TAG 404
           +AG
Sbjct: 398 SAG 400


>gi|291060011|gb|ADD72746.1| histidyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 467

 Score =  178 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 117/451 (25%), Positives = 184/451 (40%), Gaps = 39/451 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            ++ +GF D    E   R  +++ +       GF PI+TP LEY++ L +    +    K
Sbjct: 34  PKVLKGFRDLLPDEEIERALLVEKLTVALRQMGFVPIDTPALEYTEVLLRKSEGD--TEK 91

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F   D  G+ ++LR+DLT PLAR+VA ++  + FP + Y    V+R EK   GR+R+F
Sbjct: 92  QMFRFVDKGGRDVALRFDLTVPLARFVATHYARLYFPFKRYHFAKVWRGEKPQMGRYREF 151

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            QCD D VGS +  AD E+   +   L   G       I + +R + D  L  + L    
Sbjct: 152 TQCDFDIVGSDSVCADFEILKSIRHMLYMAG--AEHIRIHVAHRGLFDRFLRALSLSD-- 207

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              +   +LR IDK  K     +   L                   E     V  ++   
Sbjct: 208 ---QAEHILRIIDKRAKMAPHVLTAQLESLCDPVRVQKIMTYVSAGE-----VDGVAPSF 259

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           E ++  +  L  G     +    L  I EL+      S       +I RG +YYTG V E
Sbjct: 260 EHTLSAIETLTGG---VSEESTRLRKIYELLCAVNIQS-SYVFDPSITRGFDYYTGMVCE 315

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             L         +    GSV  GGRYD L + +    V   G SIG+ RL  A + L   
Sbjct: 316 TFLT--------QLPHIGSVCSGGRYDHLTALYMKDAVSGVGASIGLDRLYAAFQQLG-- 365

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
             + + +  V       DS  +  YQ          +  E+F    +    Q  +A+++ 
Sbjct: 366 -MSREHVCFVQALIFCQDSALMDVYQKLCSYF-AVQVATEVFPD-PRKLSQQYAFAEKKG 422

Query: 429 CPLAIIQGTGERSRGMLQ-----IKDLAKGK 454
               I     E+   +++     ++DL+  K
Sbjct: 423 IRWGIFV---EQRNAVVEDCLLVLRDLSTRK 450


>gi|315638102|ref|ZP_07893287.1| histidine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481950|gb|EFU72569.1| histidine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 408

 Score =  178 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 97/461 (21%), Positives = 165/461 (35%), Gaps = 56/461 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +I+     + +NYGF  I TP LE S    + + +  D   
Sbjct: 2   INALKGMKDVEGKQAFFYTKIIKICEEVAQNYGFSLINTPHLELSKLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D  G  + LR + TA + R   E+         R +  G +FR E+   GR R
Sbjct: 62  KEMYEFIDKGGNEVCLRPEGTAGVVRSYIEHKMDKSGSVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V++ G+ +   DA + +M+ +    + IK       +   + L+   + +    
Sbjct: 122 EFHQFGVESFGTKSVYEDASLILMLVEIFTRLDIKFKLIINSLGCFECLESYKKTLIEFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +           D L +  L  +++L  + + ++     K A L       +   L  
Sbjct: 182 KTQNG------FCEDCLRRQTLNPIRVL--DCKNEHCQSLLKNAPL-------LSQRLCP 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             EK+   L   +K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCEKNFTLLQTCLKENGVEFELDDKL-----------------------VRGLDYYSQTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G+N    GF++GI RLI  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLGGKNGYGVGFALGIERLIAILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +           I     D   +         LR    +  +    +K     L  AD 
Sbjct: 316 ENEERK------GIYLCALDEAYMPHLMQIATKLRK-NKKVFLSY-EAKKLAKHLASADT 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               + +  G  E     L  K+L   +E    I   E   
Sbjct: 368 METEIFLCMGENEARNQSLFYKNLNTKEEKQILISTLEQHL 408


>gi|110004664|emb|CAK98999.1| putative histidyl-trna synthetase protein [Spiroplasma citri]
          Length = 418

 Score =  178 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 97/459 (21%), Positives = 180/459 (39%), Gaps = 56/459 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           +  + PRG  D   ++    + +   +R++   Y +  I TP+ E  D   + +  + D 
Sbjct: 1   MNIQKPRGTEDLYYEKASELSALELMLRSLAMQYNYHEIRTPIFEAKDLFVRSVGAETDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPG 123
            +K +F L D   +   LR + TAP+ R + E+        P + + +G +FR E+   G
Sbjct: 61  VSKEMFELLDKKERAFVLRPEGTAPVIRSIIEDKLYGKYELPLKLFYLGNMFRYERPQHG 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R RQF Q  V+ VG+     D E+ ++  + L+ +G+      +            E   
Sbjct: 121 RLRQFNQFGVEVVGAKNYLLDVEVILLGYNLLKTLGLTNLTLKLNYLMVG------EART 174

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +               D   +     +++L  +   D  G+              +  +
Sbjct: 175 KYLGVLTAFFQDQTLCADCKIRLQKNPLRVLDCKIDHDKFGN-----------APKIYDY 223

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L     +    + +L+                               + + +VRGL+YYT
Sbjct: 224 LIPTENEEFVAIQKLLTKL-----------------------GIPFSLDAQLVRGLDYYT 260

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRLIVAL 362
           G V+E ++               ++ GGG YD LV  F+   + PA GF++G+ RL++ L
Sbjct: 261 GIVFEIVIEDQNRE--------LTLLGGGCYDQLVHTFEPSLDYPAVGFALGLERLLLTL 312

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            + +    +   +   LI   DH   +         +LR +G RA+     +++   Q K
Sbjct: 313 ATNDIVLADEPYLDAYLICLSDH---ARHFAASLLLLLRASGFRADCDY-LTRSVKAQFK 368

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +R     AII G  E  + +L+IK+   GKE   + +
Sbjct: 369 SLERLKAKNAIIIGDKELKKNVLKIKNQQTGKEQEVKFE 407


>gi|205356733|ref|ZP_03223493.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345372|gb|EDZ32015.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 408

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 93/458 (20%), Positives = 174/458 (37%), Gaps = 56/458 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +++ +   + +NYGF  I TP LE      + + +  D   
Sbjct: 2   INALKGMKDLLDKDAYYYEKVIKTCEEVAKNYGFTFINTPHLELCTLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D     + +R + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+++G      DA + +M+ +    +GI        +   + L    +++    
Sbjct: 122 EFHQFGVESLGIPNVYEDASIILMLVEIFSRLGIDFKLQLNSLGCLQCLPKYRDRLVEFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D K           D L +  L  +++L  + + ++  +  + A L       +++ L  
Sbjct: 182 DSKEG------FCEDCLRRKNLNPIRVL--DCKNEHCQNLLENAPL-------LINNLCT 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K    L +++K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCQKDFETLQQILKDNGVKFELDSKL-----------------------VRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G++    GF++GI R+I  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLGGKSGYGIGFAMGIERIITILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   + K       LR    +  +    ++     L+ AD+
Sbjct: 316 EKIQRE------GIYLCAMDEIYIQKLLHIATNLRKE-YKVLLSY-EARKLAKHLENADK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            N  + +  G  E     L  K+LAK +E   +I + +
Sbjct: 368 NNTEIFLCMGENEAQNESLFYKNLAKKEEKMIKISDLK 405


>gi|329945608|ref|ZP_08293341.1| histidine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528611|gb|EGF55576.1| histidine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 473

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 116/475 (24%), Positives = 192/475 (40%), Gaps = 44/475 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +       +    +D +R  +E +GF  I+T  +E    L +        +K V+ 
Sbjct: 15  SGFPEWLPAGHIVEQHFVDILRRTFELHGFSGIQTRAVEPLSELTRKGE----TSKEVYL 70

Query: 73  L------------QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           L            + D  + + L +DLT P ARYV +N   + FP + Y+I  V+R E+ 
Sbjct: 71  LNRLQADPAEADAEADPRKQLGLHFDLTVPFARYVVDNAGLLTFPFKRYQIQKVWRGERP 130

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFR+FIQ D+D VG  +     ++ + +        +      I ++NRK+  G  +
Sbjct: 131 QEGRFREFIQADIDIVGDGSLPLYHDVEVPLIMHEALSALPVPPVTIHVSNRKVAQGFYQ 190

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            IG+  D    + + +LR +DKLDK G + V   L +    ++    +           +
Sbjct: 191 SIGIDSD----QLIEILRVVDKLDKIGPEKVAAELTQSVGASAQQAAQAL--------RL 238

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG-YNSNRIKISSTIVRGL 299
            +    D +    ++   + G    E     L  I+ L+  +G      I     I RGL
Sbjct: 239 ATIAGTDGQDVSGQVLRALAGAEPTELLEEGLAEITALLEAAGRRRPGAIIADLKIARGL 298

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG VYE+ +              GSV  GGRYD L +  K       G  I I    
Sbjct: 299 DYYTGTVYESFMTG--------HEDLGSVCSGGRYDSLATNGKRTFP---GVGISIGLSR 347

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +  + +      +    P  +     D    S        LR  GI A++   ++K FG 
Sbjct: 348 LLARVIGEELVEVSRPVPTAVLVAVTDEAHRSASDAIADALRARGISADVAPSAAK-FGK 406

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           Q+K AD+R+ P     G          +KD+  G+++  +        +  V Q+
Sbjct: 407 QIKAADKRSIPFVWFPGADGAPD---SVKDIRSGEQVEADAATWRPPHDDAVPQV 458


>gi|330859276|emb|CBX69626.1| histidyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 357

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 78/358 (21%), Positives = 133/358 (37%), Gaps = 58/358 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    +  I  RI   ++ +   YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPADTAIWQRIEGILKQVLAGYGYSEIRMPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++  D +G+ ++LR + TA   R   E+        R + IGP+FR E+
Sbjct: 57  GEVTDVVEKEMYTFDDRNGESLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRYER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR+RQF Q   +  G      DAE+ ++ A    A+GI  +     +    ++ R  
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELILLTARWWRALGISEHVQLELNSIGSLDARAD 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L        D L+E        D   +     +++L  +              L  
Sbjct: 177 YREALVTFLEQHVDVLDE--------DCKRRMYSNPLRVLDSKN---------PDVQLLL 219

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +  +L  + ++    L EL+                               ++  
Sbjct: 220 NDAPKLSDYLDDESKQHFAGLCELL-----------------------NQAGIPYTVNER 256

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
           +VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA G  
Sbjct: 257 LVRGLDYYNRTVFEWVTNS--------LGAQGTVCAGGRYDGLVEQLGGRATPAVGLR 306


>gi|308161209|gb|EFO63665.1| Histidyl-tRNA synthetase [Giardia lamblia P15]
          Length = 964

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 96/519 (18%), Positives = 191/519 (36%), Gaps = 41/519 (7%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             + P G  D    ++ +R   L  I +I++ +G   IETP++E    L     +E    
Sbjct: 432 IPQPPCGMRDLLPGQMALRQTALSLITSIFQQHGALCIETPVMESRSVLMGKYGEE---Q 488

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGPGR 124
           K ++++ D   + +SLRYDLT P ARY A + +  +      R YR       +      
Sbjct: 489 KLIYNVSDYGEEPLSLRYDLTVPFARYCATHREKSIKRYSIGRVYRRDKPVIEKGRFREF 548

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           ++  +    +    +   ADAE+ +++ + L A+     ++ I IN+R ILD  +   G+
Sbjct: 549 YQCDLDIVYEPNTQAPMAADAEVVVIVFEILNALRKSIRNFEILINHRGILDSAMAVAGV 608

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI----- 239
             + K      V   ID+LDK   + V+  + + +            L   ++       
Sbjct: 609 SDEQK----KAVCSCIDQLDKHSKEEVRDKIVKSKGLTPVVADIVLALIDFKLPTSPHMF 664

Query: 240 ---MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS--ST 294
                 F S  +             +    +  + +    E +      ++ +       
Sbjct: 665 ISPSFDFTSTAIAALKEMHASASLDSTLSSQFIDAISPKLEQLGLLFRYASLMCPQSLEC 724

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ--NVPATGFS 352
           +V       G  Y   + F            GS+ GGGRYD L+ +F+ +   + A G S
Sbjct: 725 MVLDFSLTRGLDYYTGMVFEAKLISDYGERTGSIAGGGRYDELLGKFRARGDELCAVGGS 784

Query: 353 IGISRLIVALKSLESS--------------TNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           IGI R+   L++ +++              +  +       +        ++        
Sbjct: 785 IGIERIFAILEARQATLDGLTVGGVEDDGSSCKLTSAKRYDVYICGAPGCTIEARLEVAG 844

Query: 399 MLRTAGIRAEMFLGSS---KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
           +L   GI   +        K     +      +  LA+I G  E    ++ +K+L   ++
Sbjct: 845 ILWGLGISVGVSHKEGCSQKLLKKDIDEGVAGHALLALIIGGDEIESRVINVKNLETTEQ 904

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           +         +    +A      +  +S  +K+L++ K+
Sbjct: 905 IVVPFDEIGEYCSKVLAARHERFA--LSECEKLLKDIKD 941


>gi|302414984|ref|XP_003005324.1| histidyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261356393|gb|EEY18821.1| histidyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 477

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 103/436 (23%), Positives = 185/436 (42%), Gaps = 51/436 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K K   + P+G  D    ++ IR +I   +R++++ +G   ++TP  E +  L    
Sbjct: 1   MPPKIKFELKTPKGTKDWFGPDMIIREQIFSVMRSVFQRHGAMELDTPTFELTPILTGKY 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRN 117
            ++   +K ++ L D  G+  SL YD T P+AR++A+N    V      + YR      N
Sbjct: 61  GED---SKLIYQLADQGGEDSSLVYDCTVPMARWLAQNAIENVKRYTIKKVYRRDQPAMN 117

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           +      ++  I     N       A  E+  +  +   A+G   + Y I IN+RKILDG
Sbjct: 118 KGRQREFYQADIDFAGANYDPMLPDA--EIIRITTEVFSALG-WADTYTININHRKILDG 174

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           + +  G+  +    +   +  A+DKLDK     VK            + T    L  E  
Sbjct: 175 MFQVCGVPDE----KIRAISSAVDKLDKAPWADVKK-----------EMTAEKGLDEEVA 219

Query: 238 DIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           D +  ++ ++ ++ + E     E +      ++G +++ ++ E +   G   +R+  S +
Sbjct: 220 DKIGEWVILEGKQDVIEKLRADEKMAANELIQQGLSDMEILFEYLEVFGC-LDRVSFSLS 278

Query: 295 IVRGLEYYTGCVYEAILGFPV---------------------MNEKQKPVVFGSVGGGGR 333
           + RGL+YYTG +YE  +                           +  + V  GSV  GGR
Sbjct: 279 LARGLDYYTGIIYEVRVPESAPPVAPADGEGGAKKKKSKSKNTEDASESVGVGSVAAGGR 338

Query: 334 YDGLVSRFK-GQNVPATGFSIGISRLIVALKSLESSTNN-IKEMGPVLITTMDHDSDSLS 391
           YD LV  F   + VP  G S GI R+   +K+  ++ N        V +  +   +  + 
Sbjct: 339 YDNLVGMFSGKKQVPCVGISFGIERIFSLMKARMAAENEAAPSTVDVYVMALGSKAGLVK 398

Query: 392 KYQMYTQMLRTAGIRA 407
           +    +  L  AG++ 
Sbjct: 399 ERLRVSAQLWDAGVKV 414


>gi|1708838|gb|AAB38116.1| histidyl tRNA synthetase [Caenorhabditis elegans]
          Length = 525

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 179/423 (42%), Gaps = 48/423 (11%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLP 61
           K  K   +  +G  D    +  +RN +L ++   +  YG + I+TP+ E  D L GK+  
Sbjct: 16  KPGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGE 75

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH- 120
           +     K V+ LQD  G+ +SLRYDLT P ARY+A N    +     Y+I  V+R ++  
Sbjct: 76  EG---GKLVYDLQDQGGELLSLRYDLTVPFARYLAMNK---ITNITRYQIAKVYRRDQPV 129

Query: 121 -GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+R+F QCD D  G             +  +      K   + +      IL+G+ 
Sbjct: 130 MSRGRYREFYQCDFDIAGQYDLMLPELSVWELLMSCSR-NWKLESFSLISITVLILEGMF 188

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              G+   D       +  ++DKLDK   + V+            +      LT EQ   
Sbjct: 189 AVSGIPAKD----FKTICSSVDKLDKTPWEDVE-----------QEMINEKFLTKEQTGK 233

Query: 240 MVSFLSIDLEKSMHELYELVKG---------TIAGEKGFNELVVISELVRKSGYNSNRIK 290
           +   +  +   ++  ++  +K              +KG  EL V+ E +   G  + R +
Sbjct: 234 LGELVRFESSIAISTIWNFLKKCHNLPDLGQNDKFKKGAEELKVLIEYLNVDGVTTVRYE 293

Query: 291 ISSTIVRGLEYYTGCVYEAILG--------FPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
            S  + RGL+YYTG +YEA+              +   +PV  GSV  GGRYDGLV  F 
Sbjct: 294 PS--LARGLDYYTGAIYEAVAPKALEGTAVENSEDTAGQPVGVGSVAAGGRYDGLVKMFD 351

Query: 343 -GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
              NVP  G S GI RL   +++ +             +       + +   +   +MLR
Sbjct: 352 SKANVPCCGVSFGIERLFAIMEARQKVAI---RTTQTEVYVASAQKNLVRDRKKLVKMLR 408

Query: 402 TAG 404
           +AG
Sbjct: 409 SAG 411


>gi|86742229|ref|YP_482629.1| histidyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86569091|gb|ABD12900.1| histidyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 440

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 137/473 (28%), Positives = 210/473 (44%), Gaps = 48/473 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     +R     GF +   +   +  R LD+IR  +E YGF  +ETP +E  + L    
Sbjct: 1   MSDAPIVRPLPVSGFPEWLPEVRLVEQRWLDTIRATFERYGFCSVETPSVEALEVLTAKG 60

Query: 61  PDEDRPNKGVFSL------QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
                 ++ V+ L       DDD   + L +DLT P ARYVA +F+ +VFP + Y+I  V
Sbjct: 61  E----TSQEVYMLRRLQADADDDSARLGLHFDLTVPFARYVAAHFNDLVFPFKRYQIQRV 116

Query: 115 FRNEKHGPGRFRQFIQCDVD--NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           +R E+   GRFR+F QCD+D  NV       DAE+  ++ + L  +G+    + + INNR
Sbjct: 117 WRGERPQEGRFREFTQCDIDVINVDQVPLHFDAELPRIVHEVLGTLGVPP--WTLNINNR 174

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+L G  E +G+       + L V+R  DKLDK GL GV+ LL           T    L
Sbjct: 175 KVLQGFYEGLGI------GDPLAVIRVADKLDKIGLAGVEGLL-----------TTAVGL 217

Query: 233 TSEQIDIMVSFLSIDLEK--SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
             +Q+   +    I       + E+  L   +    +G +EL  +   +      +  + 
Sbjct: 218 DPDQVRACLELTGIRGCDPGVVEEVRRLGVKSDLLSEGLDELAAVLGDLAD--LPAGDVV 275

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              +I RGL+YYTG VYEA               FGS+  GGRYD L   F  +N+P  G
Sbjct: 276 ADLSIARGLDYYTGTVYEAKFVDW--------PDFGSICSGGRYDNLAGSFIRRNLPGVG 327

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG++R+   L +    T        VL+        + +        LRT G+R E +
Sbjct: 328 ISIGLTRIFAKLLAEGLLTTGPSSPADVLVVIPAAPRRAAALATA--AELRTRGLRVETY 385

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               K    Q++YA R+           +     +  K++A G + + +    
Sbjct: 386 HQPDK-VARQVRYASRKGIGFVWFPPFDDGRAHEV--KNMATGDQSAADPATW 435


>gi|226227160|ref|YP_002761266.1| histidyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090351|dbj|BAH38796.1| histidyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 434

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 93/432 (21%), Positives = 164/432 (37%), Gaps = 34/432 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   GF D    +   R  I D+ R I   Y F   + P LE  +   +   DE   
Sbjct: 1   MSHKPLPGFRDFYPDQFAERAHIFDTWRRIVRRYAFQEYDGPPLEPLELYTQKSGDEIVT 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +++  D   + +++R ++T   AR V      +  P R + +  +FR E+   GR R
Sbjct: 61  --QLYNFVDKGERPVAMRPEMTPTFARMVGARAQALRKPVRWFSLPQLFRYERTQKGRLR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q +VD VG +    DAE+  +  + + A G+   D    +++R++L+G+LE + +  
Sbjct: 119 EHFQLNVDIVGEADVMTDAELVSVAIEIMRAFGLTHTDVRARVSDRRLLNGLLEHLAIAE 178

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                                +  V   L     + S +    A +  +  ++++ F S+
Sbjct: 179 ----------------PTWPAVYAVLDKLERQPREVSAEKLAEAGIAGDTAEVILGFTSL 222

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D       +        A +   +            G  +  ++   TIVRGL YYTG V
Sbjct: 223 D----FATVQARYGDAPAVKPHLDRFAQYLAHCDALGVGA-WMRFDLTIVRGLAYYTGIV 277

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E                F ++ GGGRYD L+    G ++PA GF +G   +   L+S  
Sbjct: 278 FELF---------DNVGEFRAICGGGRYDNLLKSLGGTDLPALGFGMGDVVIGELLRSRG 328

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +        +       D+ +        LR+A    E  L S K    QL+   +
Sbjct: 329 LLQVSATPPA-YWVAQSPDAPDAPAAALRTASALRSAECIVEYALKSQK-LDKQLEAGRK 386

Query: 427 RNCPLAIIQGTG 438
                 +I    
Sbjct: 387 AGAGAFVIVDPS 398


>gi|48477584|ref|YP_023290.1| histidyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|73919755|sp|Q6L1Q5|SYH_PICTO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|48430232|gb|AAT43097.1| histidyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 423

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 105/457 (22%), Positives = 185/457 (40%), Gaps = 40/457 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E  +GF D    ++ IR   +  + +   ++G+  I+ P LE  D        E   
Sbjct: 1   MKIERLKGFRDHYPDDMEIRYDFIKKMMDTAISFGYKMIDFPSLESMDLYRLKSGTELV- 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            +  FS  D  G+ +++  + T    R +      I  P R + I  V+R E+   GR+R
Sbjct: 60  -EQTFSFTDKGGREVTMIPEATPSTMRMLTSRK-DIKMPARWFSIPKVWRYEEPQEGRYR 117

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + IQ + D  G+ +  ADAE+  + A  L+ +G+    Y I +N+R +++ IL  +G + 
Sbjct: 118 EHIQFNADMFGADSPEADAEIIGLAATILDNLGL-SGQYEINVNDRYLMELILRDLGSNN 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
              L   +      D+  K  L   K  L +   D++ +      +    I+ +   L+ 
Sbjct: 177 PVDLFPVI------DRFKKMDLTDFKKRLLKDLDDDASEKLISLLMNRIDINDVERLLNG 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                M  +  L        K                Y  +++ I  ++VRGL YYTG V
Sbjct: 231 YANDVMERVKRLKDTFALTSK----------------YTKSKLNIDLSVVRGLSYYTGIV 274

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +EA                 ++ GGGRYD L + F  +++PA GF+IG + + + LK   
Sbjct: 275 FEAF---------DISGELRAILGGGRYDNLSNLFINESIPAVGFAIGDAVIELLLKRNN 325

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                 K     ++                   +R +G  A +   + +     +KYA+ 
Sbjct: 326 LWNYKDKRKRYYVVNISSSPEAH----IEILNKIRGSGNIA-ISEVNKRRMQTIIKYAES 380

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             C   II G  E S   + IK+L   ++    I + 
Sbjct: 381 IKCDFLIIIGDRELSSKKMTIKNLRTQEQAEMNIDDF 417


>gi|15639628|ref|NP_219078.1| histidyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025866|ref|YP_001933638.1| histidyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094402|sp|O83647|SYH_TREPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229470701|sp|B2S3N0|SYH_TREPS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|3322940|gb|AAC65615.1| histidyl-tRNA synthetase (hisS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018441|gb|ACD71059.1| histidyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 442

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 117/451 (25%), Positives = 184/451 (40%), Gaps = 39/451 (8%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            ++ +GF D    E   R  +++ +       GF PI+TP LEY++ L +    +    K
Sbjct: 9   PKVLKGFRDLLPDEEIERALLVEKLTVALRQMGFVPIDTPALEYTEVLLRKSEGD--TEK 66

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F   D  G+ ++LR+DLT PLAR+VA ++  + FP + Y    V+R EK   GR+R+F
Sbjct: 67  QMFRFVDKGGRDVALRFDLTVPLARFVATHYARLYFPFKRYHFAKVWRGEKPQMGRYREF 126

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            QCD D VGS +  AD E+   +   L   G       I + +R + D  L  + L    
Sbjct: 127 TQCDFDIVGSDSVCADFEILKSIRHMLYMAG--AEHIRIHVAHRGLFDRFLRALSLSD-- 182

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              +   +LR IDK  K     +   L                   E     V  ++   
Sbjct: 183 ---QAEHILRIIDKRAKMAPHVLTAQLESLCDPVRVQKIMTYVSAGE-----VDGVAPSF 234

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           E ++  +  L  G     +    L  I EL+      S       +I RG +YYTG V E
Sbjct: 235 EHTLSAIETLTGG---VSEESTRLRKIYELLCAVNIQS-SYVFDPSITRGFDYYTGMVCE 290

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             L         +    GSV  GGRYD L + +    V   G SIG+ RL  A + L   
Sbjct: 291 TFLT--------QLPHIGSVCSGGRYDHLTALYMKDAVSGVGASIGLDRLYAAFQQLG-- 340

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
             + + +  V       DS  +  YQ          +  E+F    +    Q  +A+++ 
Sbjct: 341 -MSREHVCFVQALIFCQDSALMDVYQKLCSYF-AVQVATEVFPD-PRKLSQQYAFAEKKG 397

Query: 429 CPLAIIQGTGERSRGMLQ-----IKDLAKGK 454
               I     E+   +++     ++DL+  K
Sbjct: 398 IRWGIFV---EQRNAVVEDCLLVLRDLSTRK 425


>gi|111225103|ref|YP_715897.1| histidyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111152635|emb|CAJ64376.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) [Frankia alni
           ACN14a]
          Length = 440

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 125/477 (26%), Positives = 207/477 (43%), Gaps = 51/477 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     +R     GF +   +   +  R LD+IR  +E YGF  +ETP +E  D L    
Sbjct: 1   MSDAPIVRPLPVSGFPEWLPEVRIVEQRWLDTIRATFERYGFCSVETPSVEALDVLTAKG 60

Query: 61  PDEDRPNKGVFSL------QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
                 ++ V++L       DDD   + L +DLT P ARYVA +F+ +VFP + Y++  V
Sbjct: 61  E----TSQEVYTLRRLQADADDDSARLGLHFDLTVPFARYVAAHFNELVFPFKRYQMQRV 116

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAE--MCMMMADTLEAVGIKRNDYHIGINNR 172
           +R E+   GRFR+F QCD+D +         +  +  ++ + L  +G+    + + INNR
Sbjct: 117 WRGERPQEGRFREFTQCDIDVINVDRVPLHFDAELPRIVHEVLGTLGVPP--WTLNINNR 174

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+L G  E +G+       + L V+R  DK+DK G  GV  LLG             A L
Sbjct: 175 KVLQGFYEGLGI------GDPLAVIRIADKMDKIGPDGVATLLG-----------AQAGL 217

Query: 233 TSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            ++Q+   +    +       + E+  L   +    +G +EL  + + +      +  + 
Sbjct: 218 DADQVRACLDLAAIRATGPGVVDEVRRLGVKSDLLTEGLDELAQVLDDLAD--LPTGSVV 275

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              +I RGL+YYTG VYEA               FGS+  GGRY+ L   F  + +P  G
Sbjct: 276 ADLSIARGLDYYTGTVYEAKFVDW--------PDFGSICSGGRYENLAGSFIRRALPGVG 327

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG++R+   L +     +       VL+        + +            G++ E +
Sbjct: 328 ISIGLTRIFAKLLAEGLLPSGPASPADVLVVIPAAQRRAAALATATALR--ARGLKVETY 385

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               K    Q++YA R+           E     +  K++A G + +    +  +W 
Sbjct: 386 HQPDK-IAKQVRYAARKGIGFVWFPPFDEGREHEV--KNMATGDQAA---ADPAAWL 436


>gi|283957253|ref|ZP_06374714.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791265|gb|EFC30073.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 408

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 94/458 (20%), Positives = 170/458 (37%), Gaps = 56/458 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +++ +   + +NYGF  I TP LE      + + +  D   
Sbjct: 2   INALKGMKDLLDKDAYCYEKVIKTCEEVAKNYGFTFINTPHLELYTLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D     + +R + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V++ G+++   DA + +M+ +    + IK       +   K +    E +    
Sbjct: 122 EFHQFGVESFGNASVYEDASIILMLVEIFSRLDIKFKLLINSLGCLKCMPKYRENLIHFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D K           D L +  L  +++L  + + ++       A L       +   L  
Sbjct: 182 DSKEG------FCEDCLRRKNLNPIRVL--DCKNEHCQSLLNDAPL-------LNQNLCS 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K    L  ++K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCQKDFEILQSVLKENGVDFEVDSKL-----------------------VRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G++    GF++GI R+I  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLDGKSGFGVGFAMGIERIIAILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   + K       LR    +  +    ++     L+ AD+
Sbjct: 316 EKVQRE------GIYLCAMDEIYIQKLLHIATNLRKE-HKVLLSY-EARKLAKHLENADK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            N  + +  G  E     L  K+LAK +E   +I + +
Sbjct: 368 NNAEIFLCMGENEAQNESLFYKNLAKKEEKMIKISDLK 405


>gi|57237610|ref|YP_178858.1| histidyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|86150221|ref|ZP_01068448.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597601|ref|ZP_01100835.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562393|ref|YP_002344172.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|32130152|sp|Q9PPF4|SYH_CAMJE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|73621969|sp|Q5HV27|SYH_CAMJR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|57166414|gb|AAW35193.1| histidyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|85839337|gb|EAQ56599.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190193|gb|EAQ94168.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360099|emb|CAL34893.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315058219|gb|ADT72548.1| Histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
 gi|315928308|gb|EFV07624.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929198|gb|EFV08420.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 408

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 93/458 (20%), Positives = 173/458 (37%), Gaps = 56/458 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +++     + +NYGF  I TP LE      + + +  D   
Sbjct: 2   INALKGMKDLLDKDAYYYEKVIKICEEVAKNYGFTFINTPHLELCTLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D     + +R + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKRWFYYGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+++G      DA + +M+ +    +GI        +   + L    +++    
Sbjct: 122 EFHQFGVESLGIPNVYEDASIILMLVEIFSRLGIDFKLQLNSLGCSQCLPKYRDRLVEFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D K           D L +  L  +++L  + + ++  +  + A L       +++ L  
Sbjct: 182 DSKEG------FCEDCLRRKNLNPIRVL--DCKNEHCQNLLENAPL-------LINNLCT 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K    L +++K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCQKDFETLQQILKDNGVKFELDSKL-----------------------VRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G++    GF++GI R+I  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLGGKSGYGIGFAMGIERIITILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   + K       LR    +  +    ++     L+ AD+
Sbjct: 316 EKIQRE------GIYLCAMDEIYIQKLLHIATNLRKE-YKVLLSY-EARKLAKHLENADK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            N  + +  G  E     L  K+LAK +E   +I + +
Sbjct: 368 NNTEIFLCMGENEAQNESLFYKNLAKKEEKMIKISDLK 405


>gi|125975361|ref|YP_001039271.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           thermocellum ATCC 27405]
 gi|256005493|ref|ZP_05430455.1| histidyl-tRNA synthetase 2 [Clostridium thermocellum DSM 2360]
 gi|281419321|ref|ZP_06250336.1| histidyl-tRNA synthetase 2 [Clostridium thermocellum JW20]
 gi|166219829|sp|A3DJE9|HISZ_CLOTH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|125715586|gb|ABN54078.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           thermocellum ATCC 27405]
 gi|255990548|gb|EEU00668.1| histidyl-tRNA synthetase 2 [Clostridium thermocellum DSM 2360]
 gi|281406941|gb|EFB37204.1| histidyl-tRNA synthetase 2 [Clostridium thermocellum JW20]
 gi|316939476|gb|ADU73510.1| histidyl-tRNA synthetase 2 [Clostridium thermocellum DSM 1313]
          Length = 418

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 97/456 (21%), Positives = 184/456 (40%), Gaps = 45/456 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +   P G  D    E   +  + D IR ++   G+  +ETP++E+ D       +   P 
Sbjct: 5   KIYTPEGVQDILQNECFFKKNLEDRIRKVFRASGYYEVETPIVEFYDVF--STEENIIPQ 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + +F   D  G+ + LR DLT P+AR  A       +P R   IG  F+  + G G+ ++
Sbjct: 63  ETMFKFFDQQGRILVLRPDLTIPIARVAATKLKDAAYPLRISYIGNAFKYNELGGGKQKE 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+ +G +   ADAE+     D ++A G+   ++ I I   +   G++E+ GL  +
Sbjct: 123 FTQAGVEIIGVNTPEADAEVIATAIDAVKATGL--ENFQIDIGQVEFFKGLMEETGLSEE 180

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +                    + +++L+         +  +  N+  +  ++++ F  + 
Sbjct: 181 E-------------------TEKMRVLIDRKDFLGIEELVEEHNIRDDLKELILDFPKLF 221

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
               + +  E         K  N L  I  ++   G +   + +   +V+ L YY+G ++
Sbjct: 222 GSTDVIDRVEKYPINERSIKALNNLRSIINILDDYGLSK-YVSVDLGMVQSLNYYSGTIF 280

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                           V   +  GGRYD LV +F  ++ PATGFS+GI+ +++AL   + 
Sbjct: 281 RGFT----------YGVGFPILSGGRYDRLVEKFG-KSSPATGFSMGINMVMMALDRQKV 329

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                +    V         +         + LR  G+  E+ + +  +F     YA  +
Sbjct: 330 EFEKPRVDTLVCYR-----EEGRKTAFQICETLRKQGLAVEVDI-NGGDFETARNYAALK 383

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
                +     E     ++I +L KG+     I   
Sbjct: 384 GIGGILKVLDDE----NIEIHNLEKGEVSKVTISEL 415


>gi|298241576|ref|ZP_06965383.1| histidyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297554630|gb|EFH88494.1| histidyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 510

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 105/532 (19%), Positives = 190/532 (35%), Gaps = 72/532 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    R E  RG  D   +  + +  + + +  + E+ G+  +++P+LE+SD      
Sbjct: 1   MKK----RVERLRGMYDLLPEVYQQQQWVSEKVSKLLEHAGYAHVDSPVLEHSDLFHASF 56

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             E   N   F +     + + LR + TA + R   +++     P R    GP+FR E  
Sbjct: 57  GQELWQNLYAFRI---HQRDLCLRPEYTASICRLYLDHYQQQGLPQRFQYAGPIFRYEAP 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI---------------KRNDY 165
           G  R+RQ  Q  ++  G     ADAEM  +  + L  +GI                 N  
Sbjct: 114 GRSRYRQHTQLGIEIFGGQPAAADAEMIQLACEVLHDLGISRYRLELGHVGVASGFINRL 173

Query: 166 HIGINNRKILDGILEKIGLHG--DDKLNERLIVLRAIDK--------------------- 202
           H+  +  ++L G++E+I      +    ERL  L   D+                     
Sbjct: 174 HLDDHAARLLLGLMEQISRSEEGERLAQERLERLYPADQALNKMASEVSPPATVLSGVDA 233

Query: 203 ----------LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--LSIDLEK 250
                        FG   V+  + E      G   +   +    ++ +     +S     
Sbjct: 234 RYISSLLSGISISFGDDDVRREVVERFLWKMGRNEQRRQI-LNALEFLRELHAVSGPPPA 292

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
               + EL++         NEL  +  +V + G  S +I ++ ++ RG+ YYTG V+E  
Sbjct: 293 VFEAVAELLERYGLDTAPLNELRQLVAVVEQCGVPSEQILLNLSLGRGVSYYTGLVFEI- 351

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                 + ++       + GGGRYD L+         A          ++A         
Sbjct: 352 ------HAQEADGFDAQLCGGGRYDRLMRAVGSSRDIAACGFAIGLERLLA----HIPQA 401

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
            +  +       +   ++         +  R AG   E+ + S    G  LK A ++   
Sbjct: 402 TLPVLNQTQALVIPVSANEFPYALRVARAAREAGQPVEVDI-SGHGVGAGLKQAVKKQIL 460

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           LA+I G  E  +  + +++L    E         +   A   +      +LV
Sbjct: 461 LALIVGEDEARQNEVTVRNLETSVEWRLPFGELANGLVADFGEEQ--KEQLV 510


>gi|51473503|ref|YP_067260.1| histidyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81692304|sp|Q68X64|SYH_RICTY RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|51459815|gb|AAU03778.1| Histidine translase [Rickettsia typhi str. Wilmington]
          Length = 412

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 90/467 (19%), Positives = 173/467 (37%), Gaps = 64/467 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRP 66
             +  RG  D    + ++ N I++  R++   YG+  + TP+LEY+    + + D  D  
Sbjct: 4   NLQPLRGMKDLLPDDYQVHNYIINKARDVGVLYGYKQMSTPILEYTRVFNRCMGDSSDVI 63

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++S  D     I+LR + T+ + R    N      P + +  GPVFR ++   GR R
Sbjct: 64  SKEIYSFVDKSNNAIALRPEFTSGIIRSFISNGLHHKLPLKLFSTGPVFRYDRPQAGRQR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEK 181
           QF Q + + +G+     DAE   +  D L+A+ I+ +     +      +R +    L +
Sbjct: 124 QFHQLNYEYLGAKGAITDAETLKLAVDILKALEIEEDTTLELNSLGCSESRIVYQQKLVE 183

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 DKL        + +   +     +++L  +   D                 I+ 
Sbjct: 184 YLNDFKDKL--------SGESKIRLNKNPMRILDSKSEIDQK---------IIANAPILS 226

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            + + + +K                   +EL+   +++        +  I+  +VRGL+Y
Sbjct: 227 DYHTNESKKYF-----------------DELLKYLDIL------GIKYSINPRLVRGLDY 263

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E            K     ++  GGRYD L       +V A GF+ GI R+ + 
Sbjct: 264 YCHTVFEFTTQ--------KLGSQATILAGGRYDMLSRIMGNYDVHAIGFAAGIERIAL- 314

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                             +  +    +++         LR   I + +          ++
Sbjct: 315 -------MKKYNIFVIKPVFVLPIGKNNICYALDIVDKLRLHNIISIIDPIG--KIAKRI 365

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +     +    I  G  E+    L+ KDL   KE   +++      +
Sbjct: 366 QRVLNEDAKFIIFVGDEEKMNNNLKFKDLKNQKEYIIDLEKVLELLK 412


>gi|300707110|ref|XP_002995777.1| hypothetical protein NCER_101238 [Nosema ceranae BRL01]
 gi|263511591|sp|C4V9J0|SYHC_NOSCE RecName: Full=Probable histidyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Histidine--tRNA ligase; Short=HisRS
 gi|239604990|gb|EEQ82106.1| hypothetical protein NCER_101238 [Nosema ceranae BRL01]
          Length = 430

 Score =  176 bits (447), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 104/464 (22%), Positives = 188/464 (40%), Gaps = 36/464 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P+G  D    +  +   ++D  +NI++ +G  PI+TP+ E    L     ++   
Sbjct: 1   MSLKTPKGTTDLNPDDALVYEDLIDRTKNIFKLHGAVPIDTPVFELKSILLNKYGED--- 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG--PGR 124
            K ++ L+++ G+  +LRYDLT P +RY++ N        + Y+IG V+R ++     GR
Sbjct: 58  TKLIYDLKNNGGEECALRYDLTVPFSRYMSMNKL---KKIKRYQIGKVYRRDQPSVVQGR 114

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F+Q D D  G S         +   + L        D+ I +++++IL GI E   +
Sbjct: 115 WREFLQADFDIAGESLPMMADSELVCCMNRLLKT-YNIGDFVIRVSDKRILYGIFEVCEI 173

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                 N    V  +IDKLDK  +  +   L                LT +QI  +  ++
Sbjct: 174 PN----NLFATVSSSIDKLDKIAVNDINKELK------------LKGLTDKQIINLNIYI 217

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                  + +            +  ++L  + E  +     S+ + I  ++ RGL+YYTG
Sbjct: 218 QKSGTVDVLDFLRENDVYKKCSEAVDDLCKLYEYCKIMKC-SDHLIIDLSLARGLDYYTG 276

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            + E          K      GSV GGGRYD L+   +  +     +++  +   + L  
Sbjct: 277 MIIE---------GKYLNKNIGSVAGGGRYDNLIGSLENSSYTN-TYNVPCAGFSIGLSR 326

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           + S     K    V +         L +      +L  A I  E F     N G   KY 
Sbjct: 327 IFSCIQKPKVNTNVKVFISASGKLLLEERLKIQSILWEANISLETFYNKRNNPGEHKKYC 386

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            +      I+    + ++G + + ++    E    I N  S  +
Sbjct: 387 VKHGIKYLIVVKEEQYNKGFVTVIEVNTNLENVIMIDNLPSHLQ 430


>gi|330466921|ref|YP_004404664.1| histidyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328809892|gb|AEB44064.1| histidyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 424

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 133/467 (28%), Positives = 202/467 (43%), Gaps = 59/467 (12%)

Query: 25  IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ----DDDG-- 78
           I   +LD IR+ +E YGF P+ET  +E  D L +        +K V+ ++    D +G  
Sbjct: 2   IEQYVLDRIRSTFELYGFAPLETRAVEPLDQLLRKGE----TSKEVYVIRRLHGDPEGPS 57

Query: 79  --QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
               + L +DLT P ARYV EN   + FP R Y+I  V+R E+   GR+R+F+Q D+D V
Sbjct: 58  GDDTLGLHFDLTVPFARYVLENAGKLNFPFRRYQIQKVWRGERPQEGRYREFLQADIDIV 117

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
                    E  M +        +      I +NNRKI +G    +GL   +        
Sbjct: 118 DRDTLAPHYEAEMPLVIGDALRSLPIPPVRIQVNNRKICEGFYRGVGLTDPEAA------ 171

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--LSIDLEKSMHE 254
           LRA+DKLDK G  GV  LL              A  +  Q   +++   +S         
Sbjct: 172 LRAVDKLDKLGPAGVTELLA-----------TTAGASDAQAKAVLALAEISAPDPSFADA 220

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +  L       ++G  ELV + E    + ++         I RGL+YYTG VYE  +   
Sbjct: 221 VRGLGVSDPLLDEGVEELVRVVE--TAAAHSPGLCVADLRIARGLDYYTGTVYETQMIGY 278

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
                     FGSV  GGRYD L S    +  P  G SIG++RL+  L    +   ++  
Sbjct: 279 ER--------FGSVCSGGRYDNLASAGNVR-FPGVGISIGVTRLLGLL--FGADALSVSR 327

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
             P  +       +  +      + LR+ GI  E+   ++K FG Q++YA+RR  P    
Sbjct: 328 SVPTCVLVAVTSEEQRAASNRVAEALRSRGIPTEVSPSAAK-FGKQIRYAERRGIPYVWF 386

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
            GT        ++KD+  G +++           A   + T P ++L
Sbjct: 387 PGTDGAPD---EVKDIRSGDQVA-----------AAAGEWTPPQADL 419


>gi|315656679|ref|ZP_07909566.1| histidine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492634|gb|EFU82238.1| histidine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 439

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 119/470 (25%), Positives = 199/470 (42%), Gaps = 51/470 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            GF +   +E  + + ++  +  ++E +GF  +ET  +E    L +        +K V+ 
Sbjct: 8   SGFPEFTPEEKILEDELISRLTKVFELHGFSHLETRAIEPLSELERKGE----TSKEVYV 63

Query: 72  --SLQDDDG---QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              LQD +G   +   L +DLT PLARYV EN   + FP + Y+I  V+R E+   GRFR
Sbjct: 64  LSRLQDKEGKEDRKNGLHFDLTVPLARYVLENSHLLRFPFKRYQIQKVWRGERPQEGRFR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+Q D+D V +       E+   +        +      + +N+RKIL G+   +G+  
Sbjct: 124 EFVQADIDMVAAETLPPQFEIEAPLIMAQALDSLPIPTPVVHVNSRKILQGVCNALGIAH 183

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +       VL+ IDK DK        +L E              L + Q+  +V+   I
Sbjct: 184 VE------GVLQVIDKHDKVSPDDFAGMLSE------------LGLDTSQVQTLVNLADI 225

Query: 247 DL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
               E  + ++ +L       E+G  ++  +   V    +    +     I RGL+YYTG
Sbjct: 226 CGADESVIQQVRDLGLQDDLLEEGLEDVARMLRSV--PDHEKGNVVADFKIARGLDYYTG 283

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            VYE  +             +GS+  GGRYD LVS+ K    P  G SIG++RLI  + +
Sbjct: 284 MVYETFITGAE--------SYGSICSGGRYDNLVSQGKRH-FPGVGMSIGLTRLISIILA 334

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +    +    P  +       ++  + +     LR  GI  E+   ++K +G Q+KYA
Sbjct: 335 --NDWAKVSRQVPTCVLVAVDSEETRGQAENVAWKLRARGINTEVSPTAAK-YGKQIKYA 391

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             R  P            G +  K+L    + S +        +    Q+
Sbjct: 392 VTRGIPYVWFV-----ESGEV--KNLINETQESAQADTFTPAPDLLKPQV 434


>gi|256832592|ref|YP_003161319.1| histidyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686123|gb|ACV09016.1| histidyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 459

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 126/475 (26%), Positives = 199/475 (41%), Gaps = 56/475 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R     GF +    +  I   +L +I+ ++E +GF  IET  +E  + L +        +
Sbjct: 3   RPTPLSGFPEWLPSQRIIEQHMLVTIQEVFELHGFSGIETRAVEPLEQLLRKGE----TS 58

Query: 68  KGVFSLQ----------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           K V+ LQ              + + L +DLT P ARYV E+   + FP + Y+I  V+R 
Sbjct: 59  KEVYVLQRLQAADDAPQAAADKALGLHFDLTVPFARYVLEHSGRLNFPFKRYQIQKVWRG 118

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADT---LEAVGIKRNDYHIGINNRKI 174
           E+   GRFR+F Q D+D VG        E+ + +      L         + I +NNR++
Sbjct: 119 ERPQDGRFREFYQADIDVVGQGELPYHYEVELPLVMARALLALAPYGVPPFTIYVNNRRL 178

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
            +G    IGL   +++      LR+IDK+DK G   V  LL              A  T+
Sbjct: 179 AEGFYRGIGLTHIEEI------LRSIDKIDKIGPGKVADLL-----------VADAGATA 221

Query: 235 EQIDIMVSFLSIDLEKS--MHELYELV----KGTIAGEKGFNELVVISELVRKSGYNSNR 288
           EQ  + +   +I       +  + EL           ++G  EL  +             
Sbjct: 222 EQAHLCLELAAIHGSDETVIDTISELAHREGVNHPLFDQGLTELRELLA--AAQVRAPGL 279

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           ++ +  I RGL+YYTG VYE +L              GS+  GGRYD L S  K    P 
Sbjct: 280 VEANLKIARGLDYYTGSVYECVLHG--------HEDLGSICSGGRYDTLASDGKNT-YPG 330

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G SIG+SRL+  L +        +    VL+    +D        +    LR   + A+
Sbjct: 331 VGLSIGVSRLVSRLFAHNLVEVTRETPTAVLVAV--NDEADRHASTVVADQLRARKVSAD 388

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +   ++K FG Q+KYAD+R  P         +++    +KD+  G++        
Sbjct: 389 VAPSAAK-FGKQIKYADKRGIPFVWF--PPTQAQPQHTVKDIRTGEQHEANPDTW 440


>gi|253742557|gb|EES99381.1| Histidyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 964

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 103/496 (20%), Positives = 191/496 (38%), Gaps = 51/496 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P G  D   +++ IR + L  I +I++ +G   IETP++E    L     +E    +
Sbjct: 433 PQPPCGMRDLLPEQMAIRQKALSLITHIFQQHGALCIETPVMESRAVLMGKYGEE---QR 489

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGPGRF 125
            ++++ D   + +SLRYDLT P ARY A + +  +      R YR       +      +
Sbjct: 490 LIYNVSDYGEEPLSLRYDLTVPFARYCATHREKAIKRYSIGRVYRRDKPVMEKGRFREFY 549

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           +  +    +    +   ADAE+ +++ + L ++     ++ I IN+R ILD  +   G+ 
Sbjct: 550 QCDLDIVYEPNTQTPMAADAEVVVIVFEILNSLQASIREFEILINHRSILDLAMAVAGVS 609

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI-------- 237
            + K      V   ID+LDK   + V+  +   +            L + ++        
Sbjct: 610 DEQK----RAVCSCIDQLDKLSKEEVREKIVNSKGLTPAVADIVLTLINFRLPTSPGLFG 665

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR--------KSGYNSNRI 289
           D    F S  +                  +  N +    + +            ++  R+
Sbjct: 666 DPSFDFASTAIAALREIHASSCLDDGLSTQFINAIRPALDQMGLLFKYASLMCPHSLERL 725

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVP 347
            +  ++ RGL+YYTG V+EA L              GS+ GGGRYD L    R +G  + 
Sbjct: 726 VLDFSLARGLDYYTGMVFEAKLISDNGERT------GSIAGGGRYDKLLGTFRAQGDELC 779

Query: 348 ATGFSIGISRLIVALKSL--------------ESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           A G SIGI R+   L++               ++S++         +        +L   
Sbjct: 780 AVGGSIGIERIFAILEARQISAESTIADRSSADASSHRGSSAKSYDVYICGAPGCTLEAR 839

Query: 394 QMYTQMLRTAGIRAEMFLGSS---KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                +L   GI   M    S   K        A   +  L +  G  E ++ ++ +K+L
Sbjct: 840 LEVAGVLWRLGISVGMSHKESCSQKLMKKDFDEAVAGHALLILNLGGDEIAKRVVNVKNL 899

Query: 451 AKGKELSREIKNNESW 466
              ++++        +
Sbjct: 900 QTAEQVTVPFDGIGEY 915


>gi|167631072|ref|YP_001681571.1| histidyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167593812|gb|ABZ85560.1| histidyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 479

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 179/411 (43%), Gaps = 43/411 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+  L  ++P G  D      R +  + +    ++ ++G+  + TP +EY D+L    
Sbjct: 1   MAKEGNL-LQIPPGMRDLLPGNAREKRLLENEWVKLFSSWGYQEVATPTVEYLDTLALDT 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E R    +F   D  G+ ++LR ++T P+AR VA       FP R + +  VFR E+ 
Sbjct: 60  GEEIRDR--LFQFFDRQGRILALRPEMTTPIARLVATRLRQCPFPQRLFYVANVFRYEEP 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+  Q  V+ +G+    ADAE+  M  + L A G+   D+ I +   ++ +G++E
Sbjct: 118 QAGRQREISQAGVELIGAPGPLADAEVIAMAVEALRASGL--EDFQISLGQIEVFNGVME 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++ L    K                     V+ L+ +    +  +    + L   Q D++
Sbjct: 176 ELPLDAATKAR-------------------VRALVAKKDFVSLEELLATSGLDKAQSDLL 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           ++  ++   + +      +       +G   L  + E +R  G   + + I   ++RG +
Sbjct: 217 LTLPTLHGGREVLIQALPLAVNDRARRGLENLRTVYEGLRAFGV-EDYVAIDLGVLRGFD 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E+                  + GGGRYD L+ +F   + PATGF++GI R+++
Sbjct: 276 YYTGVVFESYTVGLGF----------PICGGGRYDSLLGQFGF-DTPATGFALGIDRVLL 324

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           AL     S          ++    +    +++        R  G+  E+ L
Sbjct: 325 AL---SRSREPKPAPASDVVIGGGNPCKIMAEAVRM----RKNGLSVEIDL 368


>gi|315655408|ref|ZP_07908308.1| histidine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490348|gb|EFU79973.1| histidine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 439

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 111/470 (23%), Positives = 192/470 (40%), Gaps = 51/470 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            GF +   +E  + + ++  +  ++E +GF  +ET  +E    L +        +K V+ 
Sbjct: 8   SGFPEFTPEEKILEDELISRLTKVFELHGFSHLETRAIEPLSELERKGE----TSKEVYV 63

Query: 72  --SLQDDDG---QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              LQD +G   +   L +DLT PLARYV EN   + FP + Y+I  V+R E+   GRFR
Sbjct: 64  LSRLQDKEGKEDRKNGLHFDLTVPLARYVLENSHLLRFPFKRYQIQKVWRGERPQEGRFR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+Q D+D V +       E+   +        +      + +N+RKIL G+   +G+  
Sbjct: 124 EFVQADIDMVAAETLPPQFEIEAPLIMAQALDSLPIPTPVVHVNSRKILQGVCNALGIAH 183

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            + + +                  V     +   D+         L + Q+  +V    I
Sbjct: 184 VEGVLQ------------------VIDKHDKVSPDDFAQMLSELGLDTSQVQTLVKLADI 225

Query: 247 DLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                  + ++ +L       E+G  ++  +   V    +    +     I RGL+YYTG
Sbjct: 226 CGADEHVIQQVRDLGLQDDLLEEGLEDVARMLRSV--PDHAKGNVVADFKIARGLDYYTG 283

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            VYE  +             +GS+  GGRYD LVS+ K    P  G SIG++RLI  + +
Sbjct: 284 MVYETFITGAE--------SYGSICSGGRYDNLVSQGKRH-FPGVGMSIGLTRLISIILA 334

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +    +    P  +       ++  + +     LR  GI  E+   ++K +G Q+KYA
Sbjct: 335 --NDWAKVSRQVPTCVLVAVDSEETRGQAENVAWKLRARGINTEVSPTAAK-YGKQIKYA 391

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             R  P            G +  K+L    + S +        +    Q+
Sbjct: 392 VTRGIPYVWFV-----ESGEV--KNLINETQESAQADTFTPAPDLLKPQV 434


>gi|294786981|ref|ZP_06752235.1| histidine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226622|ref|ZP_07868410.1| histidine--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|294485814|gb|EFG33448.1| histidine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120754|gb|EFT83886.1| histidine--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 468

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 130/498 (26%), Positives = 216/498 (43%), Gaps = 51/498 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK         GF +   +E  I  +++D++R ++E +GF  IET  +E   SL K  
Sbjct: 1   MAKKGA----SISGFPEWLPQERAIEQQVIDTLREVFELHGFLGIETAAVEMGSSLLKKG 56

Query: 61  PDEDRPNKGVFSL-------QDDD---GQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
                 +K ++ L       QDD+    + + L +DLT PL+RYV EN   + FP + ++
Sbjct: 57  E----TSKEIYLLSRLREFGQDDETPVEEHLGLHFDLTVPLSRYVVENSGAVTFPFKRWQ 112

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM--CMMMADTLEAVGIKR-NDYHI 167
           I  V+R E+   GR+R+F Q D+D VG+ +     E+   ++M + LE +         +
Sbjct: 113 IQKVWRGERPQEGRYREFTQADIDIVGNGSLPEHYEVDAPLVMVEALERLRPFGLPKATV 172

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE---GRTDNSG 224
             NNRK+ +G    +G+   +       VLR +DKLDK     V  LL +      + + 
Sbjct: 173 HANNRKLSEGFYRGVGVTDIE------SVLREVDKLDKISAAEVAQLLQDEAGCSPEQAA 226

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
              + A +T+     + +      EK    + +  +     ++G   L +I +    +  
Sbjct: 227 ACLELAEVTATDSSHLRAAFDQLCEKH--GIDKESEAYPLAQQGVETLAMIID--EAARI 282

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
               +     I RGL+YYTG VYE  L              GS+  GGRYD LVS+   +
Sbjct: 283 RPGSVMADLRIARGLDYYTGSVYETFLDGAEK--------LGSICSGGRYDNLVSQGS-R 333

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             P  G SIG++RLI  +     +T +      V++   + D    S +      LR  G
Sbjct: 334 KYPGVGLSIGVTRLISYILHTVQATTSRISPAAVMVAVWNEDERQTSDH--IAAQLRQRG 391

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAII---QGT--GERSRGMLQIKDLAKGKELSRE 459
           I  ++   ++K  G Q+KYAD    P        G    E      Q+K++  G ++  +
Sbjct: 392 IACDVAPTAAK-IGKQIKYADHLGIPYVWFPPQAGDPAAEVKPTGHQVKNIISGDQVDAD 450

Query: 460 IKNNESWREARVAQITIP 477
             +     E     + + 
Sbjct: 451 PASWTPAPEYARRAVVVK 468


>gi|57506108|ref|ZP_00372030.1| histidyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57015592|gb|EAL52384.1| histidyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 408

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 96/461 (20%), Positives = 165/461 (35%), Gaps = 56/461 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +I+     + +NYGF  I TP LE S    + + +  D   
Sbjct: 2   INALKGMKDIEGKQAFFYTKIIKICEEVTQNYGFSFINTPHLELSKLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D  G  + LR + TA + R   E+         R +  G +FR E+   GR R
Sbjct: 62  KEMYEFIDKGGNEVCLRPEGTAGVVRSYIEHKMDKSGSVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V++ G+ +   DA + +M+ +    + IK       +   + L+   + +    
Sbjct: 122 EFHQFGVESFGTKSVYEDASLILMLVEIFARLDIKFKLIINSLGCFECLESYKKTLIEFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +           D L +  L  +++L  + + ++     + A L       +   L  
Sbjct: 182 KTQNG------FCEDCLRRQTLNPIRVL--DCKNEHCQSLLQNAPL-------LSQRLCP 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             EK+   L   +K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCEKNFTLLQTCLKENGVEFELDDKL-----------------------VRGLDYYSQTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G+N    GF++GI RLI  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLGGKNGYGVGFALGIERLIAILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +           I     D   +         LR    +  +    +K     L  AD 
Sbjct: 316 ENEERK------GIYLCALDEAYMPHLMQIATKLRK-NKKIFLSY-EAKKLAKHLASADT 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               + +  G  E     L  K+L   +E    I   E   
Sbjct: 368 METEIFLCMGENEAKNQSLFYKNLNTKEEKQILISTLEQHL 408


>gi|298714010|emb|CBJ27242.1| Histidyl-tRNA Synthetase Similar to Histidine Ammonia-Lyase
           [Ectocarpus siliculosus]
          Length = 886

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 88/383 (22%), Positives = 165/383 (43%), Gaps = 39/383 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + ++ +G  D   +++R+R +   +IRN+++ +G   I+TP+ E  ++L     ++   +
Sbjct: 502 KPKIAKGARDFLPEQMRVREQAFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGED---S 558

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPGRF 125
           K ++ L D  G+ ++LRYDLT P ARY+A +    V   + + I  V+R ++     GRF
Sbjct: 559 KLIYDLADQGGELLALRYDLTVPFARYLALHG---VGNIKRFHIAKVYRRDQPNVQLGRF 615

Query: 126 RQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           R+F QCD D  G+        E+  +  + L ++     ++ I +N+R++LD IL+  G 
Sbjct: 616 REFYQCDFDIAGNYGLMVPDAEVLSVACEILSSL--PIGNFQIKLNHRRLLDAILDICGC 673

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +    +   +  AIDKLDK     V+  + E              L  +  D +  F+
Sbjct: 674 PPE----KFRSICSAIDKLDKMDWAEVRQEMVEE-----------KGLAPDSADKIGGFV 718

Query: 245 SIDLEKSMHELYEL-----VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + +   +     +L                +EL ++ + +   G     +    ++ RGL
Sbjct: 719 NGNAGGAKELWAKLTEEKKFGDHPDAVAAMSELELLFKYLDAMGTLQ-YVSFDLSLARGL 777

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            YYTG +YE ++           +  GS+  GGRYD LV  F                 +
Sbjct: 778 TYYTGLIYECVVVDGG-------IRVGSIAAGGRYDNLVGMFSASGQTPCVGVSIGIERV 830

Query: 360 VALKSLESSTNNIKEMGPVLITT 382
           + +           +  P  +  
Sbjct: 831 LTIMEKRLQEERGDKGAPSNVQV 853


>gi|302392216|ref|YP_003828036.1| histidyl-tRNA synthetase 2 [Acetohalobium arabaticum DSM 5501]
 gi|302204293|gb|ADL12971.1| histidyl-tRNA synthetase 2 [Acetohalobium arabaticum DSM 5501]
          Length = 420

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 95/442 (21%), Positives = 187/442 (42%), Gaps = 47/442 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + + P G  D   +E + +  +   I +I+  +G++ + TP +E+  +L   +       
Sbjct: 9   KMQTPDGTKDYLPEEAKKKKYLEREIDSIFARWGYEEVITPAIEFFAAL--SIGTGSELQ 66

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++ L D  G  ++LR ++TAP+AR VA        P R      VF+ E    GR R+
Sbjct: 67  QKMYKLFDRKGHILALRPEMTAPIARLVANRLKEAPRPLRLSYQANVFKYEAPQAGRQRE 126

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  ++ +G+  + ADAE+  +  + L+ VG+K  ++ + I       G++E+  L  +
Sbjct: 127 FYQAGIELIGAKEQLADAEIAAIAVEVLQQVGLK--NFSLDIGQIDYFIGLMEEADLTTE 184

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            K                   + ++  L +          K  +LT+ Q   +++   + 
Sbjct: 185 MK-------------------KKIRSKLNQKDFVGLERLVKETDLTARQRKALLTLPDLR 225

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + +    +      +   + L  I + +   G  ++ I +   I+RG  YYTG V+
Sbjct: 226 GGREIIDRARELVDNQQSKSALDNLEKIYKNLELLGV-ADCINLDLNIIRGFNYYTGMVF 284

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                  ++ GGGRYD L+ +F     PATGF++GI RL++AL++   
Sbjct: 285 EGYTQDLGF----------TICGGGRYDNLLEQFG-AASPATGFAVGIDRLLIALENQGV 333

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                +E        + ++ D         + LR    +  + +   ++  + + YA + 
Sbjct: 334 ELPIEEER-----IFLLYEEDKKEAAINLAKDLRADDKKVALEII-DRDLASSIDYASKS 387

Query: 428 NCPLAIIQGTGERSRGMLQIKD 449
           +    +  G+ E       IKD
Sbjct: 388 DWSRLVYLGSKEL------IKD 403


>gi|284926011|gb|ADC28363.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 408

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 93/458 (20%), Positives = 173/458 (37%), Gaps = 56/458 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +++     + +NYGF  I TP LE      + + +  D   
Sbjct: 2   INALKGMKDLLDKDAYYYEKVIKICEEVAKNYGFTFINTPHLELCTLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D     + +R + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKRWFYYGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+++G      DA + +M+ +    +GI        +   + L    +++    
Sbjct: 122 EFHQFGVESLGIPNVYEDASIILMLVEIFSRLGIDFKLQLNSLGCSQCLPKYRDRLVEFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D K           D L +  L  +++L  + + ++  +  + A L       +++ L  
Sbjct: 182 DSKEG------FCEDCLRRKNLNPIRVL--DCKNEHCQNLLENAPL-------LINNLCT 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K    L +++K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCQKDFETLQQILKDNGVKFELDSKL-----------------------VRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G++    GF++GI R+I  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLGGKSGYGIGFAMGIERIITILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   + K       LR    +  +    ++     L+ AD+
Sbjct: 316 EKIQRE------GIYLCAMDEIYIQKLLYIATNLRKE-YKVLLSY-EARKLAKHLENADK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            N  + +  G  E     L  K+LAK +E   +I + +
Sbjct: 368 NNTEIFLCMGENEAQNESLFYKNLAKKEEKMIKISDLK 405


>gi|32491323|ref|NP_871577.1| hypothetical protein WGLp574 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340437|sp|Q8D1Y2|SYH_WIGBR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|25166530|dbj|BAC24720.1| hisS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 432

 Score =  176 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 107/503 (21%), Positives = 196/503 (38%), Gaps = 84/503 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L     RG  D   + + I N +   I  I ++Y +  I  P++E++    K +
Sbjct: 1   MKKN--LIISNVRGSKDITPECMHIWNYVETKIIKIVDSYNYKEIRFPIMEFAKLFSKAI 58

Query: 61  PDEDRP-NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            D++   NK ++   D +   ++LR + TA   R    N        R + +GP+FR E+
Sbjct: 59  GDDNIVVNKEMYIFLDKNKHELALRPEGTAGCVRSCIFNKLLKNNITRLWYMGPMFRYER 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKI 174
              GR RQF Q  ++  GS + +A+ E+  +     +++ I ++     +    +  R+ 
Sbjct: 119 PQKGRQRQFSQLGIEIFGSDSYSAEFELISISNRIWKSLNINKHVYLELNSIGNLQERQT 178

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
               L+K  L  +DK+ +          L+      +K+     +   +           
Sbjct: 179 YQIELKKFLLIHEDKIKKF--------FLNDITKNPIKIFNTNNKYIKN---------LL 221

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +Q   ++  + I+   +   L +++K                             KI+  
Sbjct: 222 KQAPKIIDSIGINSRNTFFYLCDILKNL-----------------------KIPYKINPF 258

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           + RGL+YY   V+E +        K+      ++  GGRYD LV    G   PA G +IG
Sbjct: 259 LFRGLDYYNDIVFEWM-------SKEINNTKIAICSGGRYDNLVKNMGGIYTPAVGCAIG 311

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-----AGIRAEM 409
           + RLI+ + SL         +   +I           +  ++++ LR        I+ + 
Sbjct: 312 LERLIMLVSSLSKEIKKKSSIDICIIPINIKIE---KEVLIFSEKLRDIFSYKLRIKVD- 367

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              S KNF  +LK AD+    + II G  E     + IK+L+  K+ +  I         
Sbjct: 368 --NSQKNFKKKLKDADKLGSKIVIILGENEIKNKQITIKNLSTRKQYTLYI--------- 416

Query: 470 RVAQITIPISELVSTVKKILQEN 492
                     + +  +KKI  +N
Sbjct: 417 ---------DDAIEKIKKIFTKN 430


>gi|295396090|ref|ZP_06806273.1| histidine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971031|gb|EFG46923.1| histidine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 444

 Score =  176 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 131/473 (27%), Positives = 204/473 (43%), Gaps = 50/473 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            GF +    +  +  RI+D +++ +E  G+  I T  +E   +L K        +K +F 
Sbjct: 7   SGFPEWLPADRAVEERIIDLLKHTFELNGYAGIHTRAVEPLSALAKDGE----IDKEIFA 62

Query: 72  --SLQDDDGQW--ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              L  +  +   + L +DLT P ARYV EN   + FP + Y+I PV+R E+   GR+R+
Sbjct: 63  VSRLHSEGSEKNPMGLHFDLTVPTARYVVENAGHLNFPFKRYQIQPVWRGERPQDGRYRE 122

Query: 128 FIQCDVDNVGSS--AETADAEMCMMMADTLEAVGIK-RNDYHIGINNRKILDGILEKIGL 184
           FIQ D+D +      E  + E+ +++    +A+G        +  NNRK+++G    +GL
Sbjct: 123 FIQADIDIIAEDTLPEHFEYEVPLVIVQAFDALGELGVPPVKVVANNRKLIEGFARGVGL 182

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                      VLR IDK DK G Q V  LL E            A  TS Q +  +   
Sbjct: 183 EN------ITAVLRCIDKYDKIGPQRVAELLQEE-----------AGATSAQAEACLKLA 225

Query: 245 SIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            I+    +    +  L       ++G   LV + +  +    +   +     I RGL+YY
Sbjct: 226 DIESATTEFADRVAALGVSNDMLDEGVEALVKLID--QAHAQSPGSVVAQLKIARGLDYY 283

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG VYE +L              GSV  GGRYD L    K    P  G SIG+SRL+  L
Sbjct: 284 TGTVYETLLQG--------HESLGSVASGGRYDALARTDKRV-YPGVGMSIGVSRLMSRL 334

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
              +      +E+    +     D ++ ++     + LR  GI A++   +SK FG Q+K
Sbjct: 335 IGKDRVLTATREVP-TAVLVAVTDEETRAEANSVARSLRERGIPADVSPVASK-FGKQIK 392

Query: 423 YADRRNCPLAIIQ-GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +AD+R  P      G          +KD+  GK+ S               Q+
Sbjct: 393 FADKRGIPFVWFTDGESGHE-----VKDIRSGKQESAAADEWLPPAADLWPQV 440


>gi|34580651|ref|ZP_00142131.1| histidyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262036|gb|EAA25540.1| histidyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 404

 Score =  176 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 83/460 (18%), Positives = 171/460 (37%), Gaps = 63/460 (13%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGVFSL 73
             D    + ++ + I++  R++   YG+  + TP++EY+    + + +  D  +K ++S 
Sbjct: 1   MKDLLPDDYKVHDYIINKARDVGVLYGYKQMSTPIVEYTKVFNRSMGESSDVISKEIYSF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D    +++LR + TA + R +  N      P + +  GPVFR ++   GR RQF Q + 
Sbjct: 61  LDKSNDFVALRPEFTACIIRSLISNRLQHKLPLKFFSTGPVFRYDRPQAGRQRQFHQLNY 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGLHGDD 188
           + +G+     DA+   +  D L+A+ I+++     +      +R +    L +      D
Sbjct: 121 EYIGAKGAITDADTLKLAVDILKALEIEQDTTLELNSLGCNESRSVYQQKLVEYLNDFKD 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L+E        +   +     +++L  +  TD                 ++  + + + 
Sbjct: 181 QLSE--------ESKIRLSKNPMRILDSKSETDQK---------IIANAPVLSEYYTDES 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                            ++ F EL+   +++        +  I+  +VRGL+YY    +E
Sbjct: 224 -----------------KEYFEELIQYLDIL------GVKYSINPRLVRGLDYYCHTAFE 260

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                       K     ++  GGRYDGL       +             I  ++    S
Sbjct: 261 FTTK--------KLGSQSTILAGGRYDGLAKIMGNNDDVPAIGFAAGIERIALMREYNIS 312

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                      +  +    +++         LRT  I   +   S      +++     N
Sbjct: 313 EVK-------PVFVLPIGKNNICYALEIVDKLRTENIAIII--ESLGKIAKRMQRIFNEN 363

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
               I  G  E++   L+IKDL K +E   +        +
Sbjct: 364 AQFIIFIGDEEQANNNLKIKDLKKAEEYIVDFAKALELLK 403


>gi|298346863|ref|YP_003719550.1| histidine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304389432|ref|ZP_07371395.1| histidine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|298236924|gb|ADI68056.1| histidine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304327242|gb|EFL94477.1| histidine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 439

 Score =  176 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 119/470 (25%), Positives = 199/470 (42%), Gaps = 51/470 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            GF +   +E  + + ++  +  ++E +GF  +ET  +E    L +        +K V+ 
Sbjct: 8   SGFPEFTPEEKILEDELISRLTKVFELHGFSHLETRAIEPLSELERKGE----TSKEVYV 63

Query: 72  --SLQDDDG---QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              LQD +G   +   L +DLT PLARYV EN   + FP + Y+I  V+R E+   GRFR
Sbjct: 64  LSRLQDKEGKEDRKNGLHFDLTVPLARYVLENSHLLRFPFKRYQIQKVWRGERPQEGRFR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+Q D+D V +       E+   +        +      + +N+RKIL G+   +G+  
Sbjct: 124 EFVQADIDMVAAETLPPQFEIEAPLIMAQALDSLPIPTPVVHVNSRKILQGVCNALGIAH 183

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +       VL+ IDK DK        +L E              L + Q+  +V+   I
Sbjct: 184 VE------GVLQVIDKHDKVSPDDFAGMLSE------------LGLDTSQVQTLVNLADI 225

Query: 247 DL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
               E  + ++ +L       E+G  ++  +   V    +    +     I RGL+YYTG
Sbjct: 226 CGADESVIQQVRDLGLQDDLLEEGLEDVARMLRSV--PDHEKGNVVADFKIARGLDYYTG 283

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            VYE  +             +GS+  GGRYD LVS+ K    P  G SIG++RLI  + +
Sbjct: 284 MVYETFITGAE--------SYGSICSGGRYDNLVSQGKRH-FPGVGMSIGLTRLISIILA 334

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +    +    P  +       ++  + +     LR  GI  E+   ++K +G Q+KYA
Sbjct: 335 --NDWAKVSRQVPTCVLVAVDSEETRGQAENVAWKLRARGINTEVSPTAAK-YGKQIKYA 391

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             R  P            G +  K+L    + S +        +    Q+
Sbjct: 392 VTRGIPYVWFV-----ESGEV--KNLINETQESAQADTFTPAPDLLKPQV 434


>gi|169806328|ref|XP_001827909.1| histidyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|161779357|gb|EDQ31380.1| histidyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 448

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 130/500 (26%), Positives = 211/500 (42%), Gaps = 62/500 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L    P+G  D    E+RI+N+++D  + I+E +G  PI TP+ E  ++L    
Sbjct: 1   MKKYDNL--RCPKGTIDLSPHEMRIKNQLIDICKTIFERHGGQPIFTPVFELRENLYNQY 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++    K +F+L+D  G   SLRYDLT P AR+++++    +   R ++IG V+R +  
Sbjct: 59  GED---EKLIFNLEDQKGDICSLRYDLTVPFARFISKHK---ISRMRKWQIGEVYRRDNP 112

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND---YHIGINNRKILDG 177
             GR R+F Q D D  G++         + M  ++            + I IN+R+I+DG
Sbjct: 113 SKGRLREFTQADFDITGTNLPMVYDSEILKMVHSILETITTTFSLKGFMIKINDRRIVDG 172

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            LE  G+ GD K      +   IDK DK  L  +K+              K   LT +QI
Sbjct: 173 YLETCGIFGDKKA----TICSTIDKFDKLTLIELKIE------------FKAKGLTDDQI 216

Query: 238 DIMVSFLSI---DLEKSMHELYELVKGTIAGEKGFNELVVISELVR----KSGYNSNRIK 290
           +++ +  +I      +++ E  E +   I      N      E ++         +  + 
Sbjct: 217 NMLFNLFTITRTRNNEAIIEYLESIYDKIITIDSMNNFKTACEELKVLFRYLSIMNVYVT 276

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              T+VRGL YYTG ++E  L              GSV GGGRYD L       N P  G
Sbjct: 277 FDLTLVRGLSYYTGLIFEGTL---------CHEEIGSVTGGGRYDNLCHTISNFNTPCVG 327

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           FSIGISRL+  +   +  + N   +G   +         + +       +       E+ 
Sbjct: 328 FSIGISRLLTIILKKQEYSQNYCSLGNKDVLVGSLYGLLIEERMEIFNEIIKY-YSCEIM 386

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            G+   F  Q++YA +    L +  G  E+    L I  +                    
Sbjct: 387 YGTKMIFNKQVEYAKKAKYKLIVFTGINEKKTNTLVIYVIET------------------ 428

Query: 471 VAQITIPISELVSTVKKILQ 490
             +I I    L++ + K+L+
Sbjct: 429 QHRIAIDKKSLITELNKLLK 448


>gi|86152110|ref|ZP_01070322.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86153432|ref|ZP_01071636.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|121612446|ref|YP_001000454.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005397|ref|ZP_02271155.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315124288|ref|YP_004066292.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|166227959|sp|A1VZB3|SYH_CAMJJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|85840895|gb|EAQ58145.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85843158|gb|EAQ60369.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87249499|gb|EAQ72459.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315018010|gb|ADT66103.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 408

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 94/458 (20%), Positives = 170/458 (37%), Gaps = 56/458 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +++ +   + +NYGF  I TP LE      + + +  D   
Sbjct: 2   INALKGMKDLLDKDAYCYEKVIKTCEEVAKNYGFTFINTPHLELCTLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D     + +R + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V++ G+++   DA + +M+ +    + IK       +   K +    E +    
Sbjct: 122 EFHQFGVESFGNASVYEDASIILMLVEIFSRLDIKFKLLINSLGCLKCMPKYRENLIHFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D K           D L +  L  +++L  + + ++       A L       +   L  
Sbjct: 182 DSKEG------FCEDCLRRKNLNPIRVL--DCKNEHCQSLLNDAPL-------LNQNLCS 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K    L  ++K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCQKDFEILQSVLKENGVDFEVDSKL-----------------------VRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G++    GF++GI R+I  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLDGKSGFGVGFAMGIERIIAILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   + K       LR    +  +    ++     L+ AD+
Sbjct: 316 EKVQRE------GIYLCAMDEIYIQKLLHIATNLRKE-HKVLLSY-EARKLAKHLENADK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            N  + +  G  E     L  K+LAK +E   +I + +
Sbjct: 368 NNAEIFLCMGENEAQNESLFYKNLAKKEEKMIKISDLK 405


>gi|157415036|ref|YP_001482292.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047109|sp|A8FLH8|SYH_CAMJ8 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|157386000|gb|ABV52315.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|315931180|gb|EFV10152.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 408

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 93/458 (20%), Positives = 169/458 (36%), Gaps = 56/458 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +++ +   + +NYGF  I TP LE      + + +  D   
Sbjct: 2   INALKGMKDLLDKDAYYYEKVIKTCEEVAKNYGFTFINTPHLELCTLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D     + +R + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V++ G+++   DA + +M+ +    + IK       +   K +    E +    
Sbjct: 122 EFHQFGVESFGNASVYEDASIILMLVEIFSRLDIKFKLLINSLGCLKCMPKYRENLIHFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D K           D L +  L  +++L  + + ++       A L       +   L  
Sbjct: 182 DSKEG------FCEDCLRRKNLNPIRVL--DCKNEHCQSLLNDAPL-------LNQNLCS 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K    L  ++K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCQKDFEILQSVLKENGVDFEVDSKL-----------------------VRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G++    GF++GI R+I  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLDGKSGFGVGFAMGIERIIAILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   + K       LR    +  +    ++     L+ AD+
Sbjct: 316 EKVQRE------GIYLCAMDEIYIQKLLHIATNLRKE-HKVLLSY-EARKLAKHLENADK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            N  + +  G  E     L  K+L K +E   +I + +
Sbjct: 368 NNAEIFLCMGENEAQNESLFYKNLVKKEEKMIKISDLK 405


>gi|157828289|ref|YP_001494531.1| histidyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|157800770|gb|ABV76023.1| histidyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 404

 Score =  175 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 81/455 (17%), Positives = 171/455 (37%), Gaps = 53/455 (11%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGVFSL 73
             D    + ++ + I++  R++   YG+  + TP++EY+    + + +  D  +K ++S 
Sbjct: 1   MKDLLPDDYKVHDYIINKARDVGVLYGYKQMSTPIVEYTKVFNRSMGESSDVISKEIYSF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D     ++LR + TA + R +  N      P + +  GPVFR ++   GR RQF Q + 
Sbjct: 61  LDKSNDCVALRPEFTACIIRSLISNRLQHKLPLKFFSTGPVFRYDRPQAGRQRQFHQLNY 120

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           + +G+     DA+   +  D L+A+ I+++               L  +G +   ++ ++
Sbjct: 121 EYIGAKGAITDADTLKLAVDILKALEIEQDTTLE-----------LNSLGCNESRRVYQQ 169

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            +V    D  ++   +  K+ L +         ++          ++  + + +      
Sbjct: 170 KLVEYLNDFKEQLSEES-KIRLSKNPMRILDSKSETDQKIIANAPVLSEYYTDES----- 223

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                       ++ F EL+   +++        +  I+  +VRGL+YY    +E     
Sbjct: 224 ------------KEYFEELIQYLDIL------GVKYSINPRLVRGLDYYCHTAFEFTTK- 264

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                  K     ++  GGRYDGL       +             I  ++  + S     
Sbjct: 265 -------KLGSQSTILAGGRYDGLAKIMGNNDDVPAIGFAAGIERIALMREYDVSEVK-- 315

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +  +    +++         LRT  I   +   S      +++     N    I
Sbjct: 316 -----PVFVLPIGKNNICYALEIVDKLRTENIAIII--ESLGKIAKRMQRIFNENAQFII 368

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
             G  E++   L+IKDL K +E   +        +
Sbjct: 369 FIGDEEQANNNLKIKDLKKEEEYIVDFAKALELLK 403


>gi|307747675|gb|ADN90945.1| Histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 408

 Score =  175 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 93/458 (20%), Positives = 167/458 (36%), Gaps = 56/458 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +++ +   + +NYGF  I TP LE      + + +  D   
Sbjct: 2   INALKGMKDLLDKDAYYYEKVIKTCEEVAKNYGFTFINTPHLELCTLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D     + +R + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+++G      DA + +M+ +    + IK       +   K +    E +    
Sbjct: 122 EFHQFGVESLGIPNVYEDASIILMLVEIFSRLDIKFKLLINSLGCLKCMPKYRENLIHFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D K           D L +  L  +++L  + + ++       A L       +   L  
Sbjct: 182 DSKEG------FCEDCLRRKNLNPIRVL--DCKNEHCQSLLNDAPL-------LNQNLCS 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K    L  ++K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCQKDFEILQSVLKENGVDFEVDSKL-----------------------VRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G++    GF++GI R+I  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLDGKSGFGVGFAMGIERIIAILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   + K       LR    +  +    ++     L+ AD+
Sbjct: 316 EKVQRE------GIYLCAMDEIYIQKLLHIATNLRKE-HKVLLSY-EARKLAKHLENADK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            N  + +  G  E     L  K+L K +E   +I + +
Sbjct: 368 NNAEIFLCMGENEAQNESLFYKNLVKKEEKMIKISDLK 405


>gi|294010048|ref|YP_003543508.1| histidyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292673378|dbj|BAI94896.1| histidyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 449

 Score =  175 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 90/434 (20%), Positives = 158/434 (36%), Gaps = 70/434 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKE----IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           M K         RG  D               ++ +   +   YGF  +E P+ E +   
Sbjct: 1   MAKIE--TPRPVRGTQDMLGGTNEAFQERFAHVVATFDRVRRLYGFQRVEVPVFESTAVF 58

Query: 57  GKFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
            + L +  D  +K +++ +D  G  I+LR + TA ++R           P +    GP+F
Sbjct: 59  ARSLGESTDVVSKEMYTFEDRGGDSITLRPEFTAGISRAYITEGWQQYAPLKVATHGPLF 118

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGIN 170
           R E+   GRFRQF Q D + +G+    AD E+ ++    L  +GI        +      
Sbjct: 119 RYERPQKGRFRQFHQLDAEIIGAGEPGADVELLVLADQLLRELGISEGVTLNLNTLGDGP 178

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           +R+     L        D+L+E        + +D+     +++L  +   D         
Sbjct: 179 SREAWRAALVAHFEAHRDQLSE--------ESIDRLHRNPLRILDSKDPRDRP------- 223

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
              ++    + ++L+ +      ++   +       +    L                  
Sbjct: 224 --VADSAPDIDAYLTDEARSFFEKVTAGLDAAGVAWERNARL------------------ 263

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                VRGL+YY    +E I          +    G+V GGGRYDGL+    G + PA G
Sbjct: 264 -----VRGLDYYRHTAFEFIT--------DRLGAQGTVLGGGRYDGLIENLGGPSTPAVG 310

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           ++ GI RL + +         +  +    +       D  +     T  LR AGI A+  
Sbjct: 311 WAAGIERLAMLID--------VPAVERPKVVVFSEADDLEADIIKVTTALRRAGIPADSI 362

Query: 411 LGSSKNFGNQLKYA 424
            G S+    +   A
Sbjct: 363 SGGSR--KKRFDKA 374


>gi|283954333|ref|ZP_06371854.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794132|gb|EFC32880.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 408

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 95/458 (20%), Positives = 172/458 (37%), Gaps = 56/458 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +++ +   I +NYGF  I TP LE      + + +  D   
Sbjct: 2   INALKGMKDLLDKDAYYYEKVVKTCEEIAKNYGFTFINTPHLELCSLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D     + +R + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKMDKSNTVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V++ G+++   DA + +M+ +    + IK       +   + +    E +    
Sbjct: 122 EFHQFGVESFGNASIYEDASIILMLVEIFSRLNIKFKLLINSLGCLECMPKYRENLIHFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D K           D L +  L  +++L  +     S           + + ++   L  
Sbjct: 182 DTKEG------FCEDCLRRKSLNPIRVLDCKKEHCQS---------LLQDVPLLNQNLCS 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K    L  ++K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCKKDFEILQSVLKENGVNFEIDSKL-----------------------VRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G+N    GF++GI R+I  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLDGKNGFGVGFAMGIERIIAILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                 +++    I     D   + K       LR    +  +    ++     L+ AD+
Sbjct: 316 ------EKLEREGIYLCAMDEIYIHKLLNIATNLRKK-YKVLLSY-EARKLAKHLENADK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            N  + +  G  E     L  K+LAK +E   +I + E
Sbjct: 368 NNAEIFLCMGENEAQNESLFYKNLAKKEEKMIKISDLE 405


>gi|149199644|ref|ZP_01876677.1| histidyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149137297|gb|EDM25717.1| histidyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 435

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 122/463 (26%), Positives = 192/463 (41%), Gaps = 43/463 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            GF +      R   RILD +  +YE+YGF PIET  +E      K L      +K +F 
Sbjct: 10  SGFPEWLPAAKRQEKRILDIVAKVYESYGFTPIETAAVEKV----KSLATTGDVSKEIFG 65

Query: 72  --SLQDDDGQ---WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              L  +         L +DLT P ARY A+NF  + FP + Y+I  V+R E+   GR+R
Sbjct: 66  IHRLAGEGENKKAEFGLHFDLTLPTARYTADNFAKLQFPFKRYQIQKVWRGERPQKGRYR 125

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q D+D +G        E  ++         +   ++ + INNRK+L+G+        
Sbjct: 126 EFYQADIDVIGDGTLPLHYEAEVVQVIYDIFTQLNIGEFTVKINNRKLLEGLYR------ 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
              +++    L  +DK+DK G   V  LL +                +E  +        
Sbjct: 180 QQDVDDMNATLIIVDKIDKIGKDEVVRLLIKSGLSIEQSTFC-----AELAEK-----KF 229

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            + +++  + EL           NEL  I + +         +    +I RGL+YYTG V
Sbjct: 230 SVSQALEFIQELDTSDELLAAAQNELKTIFDNLSH--LPDGAVIFDLSIARGLDYYTGSV 287

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           YE ++             +GSV  GGRYD L  +F  + +P  G SIGISRL+  L    
Sbjct: 288 YECVING--------LESYGSVCSGGRYDNLAEKFSKKKLPGVGLSIGISRLLYLLFENG 339

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        +     D     K       +R  GI  E+   S K FG Q+++A++
Sbjct: 340 RLDTLAPTPVQTYVVLF--DESQRPKANKMATEMRANGINVEVAP-SVKKFGKQIQFAEK 396

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           R     +I    +R     Q+K+L  G +    ++    +  +
Sbjct: 397 RGAKFIVIP-EQDRED---QMKNLETGDQEDFSVEKMRGFLSS 435


>gi|305667284|ref|YP_003863571.1| histidyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88709331|gb|EAR01564.1| histidyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 577

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 181/389 (46%), Gaps = 32/389 (8%)

Query: 82  SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
           +LRYDLT P ARYV ++ + I FP + Y+I PV+R ++   GRFR+F QCD D VG+++ 
Sbjct: 217 ALRYDLTVPFARYVVQHQNEIDFPFKRYQIQPVWRADRPQKGRFREFYQCDADVVGANSL 276

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
             + E+  +      ++  K     I INNRKIL GI E IG          +    A+D
Sbjct: 277 LQEVELVQLYDVVFTSL--KLEGVTIKINNRKILAGIAEVIGAQ-----RNLVNFTVALD 329

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELV 259
           KLDK G +GVK  +                ++   I        L+    + +  L  L+
Sbjct: 330 KLDKIGEEGVKKEML------------AKGISENSIAKAAPLFNLTGSSREQLQALKNLL 377

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
             +  G +G  E+  I   +   G  S +I +  T+ RGL YYTG ++E      +    
Sbjct: 378 ANSDQGIEGVEEVEFIVNSINDLGLKSAKIALDVTLARGLNYYTGAIFEVAAPEGIK--- 434

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
                 GS+GGGGRYD L   F  +NV   G S G+ R+ + ++ L      + +   + 
Sbjct: 435 -----MGSIGGGGRYDDLTGIFGLKNVSGVGISFGLDRIYLVMEELNLFPETLDKS--LD 487

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  M+               LR+ GI A+++  S      Q+KYA+ RN P  ++ G  E
Sbjct: 488 VLCMNFGEKESIASLKLVNELRSQGILADVYP-SKTKMQKQMKYANNRNVPYVVLIGEQE 546

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWRE 468
            +     +K++   ++++  + + + + +
Sbjct: 547 LTNNSFVVKNMKNSEQITYSLDSIQDFAK 575



 Score = 88.0 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 8  RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
          +  +P+G  D    EI  R+ I D ++  ++ +GF PIETP  E SD+L GK+  + DR 
Sbjct: 4  KPSIPKGTRDFSPAEIAKRDYIFDIVKKHFKTFGFQPIETPSFENSDTLMGKYGDEGDRL 63

Query: 67 NKGVFSLQDDDG 78
             +F + +   
Sbjct: 64 ---IFKILNSGN 72


>gi|291533273|emb|CBL06386.1| ATP phosphoribosyltransferase regulatory subunit [Megamonas
           hypermegale ART12/1]
          Length = 404

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 97/421 (23%), Positives = 181/421 (42%), Gaps = 38/421 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L  E+P G  D   K+ +++  I   +   +  +G+D I TP +EY D+L    
Sbjct: 8   MNKG--LLLEIPYGTRDFLPKDAKVKREIESKLAKNFSLWGYDEIVTPTIEYVDTLTINN 65

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                    +F   D + + ++LR+++T P+AR  A      + P +   I  V+R E+ 
Sbjct: 66  RSGIET--HLFKFFDKNNKTVALRHEMTTPIARVAASRMSDDILPYKLSYISNVYRYEQT 123

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G +    DAE+  +  D+L+ VG+K  ++ + I     ++GI++
Sbjct: 124 QEGRQCEFYQAGVELMGVAEALGDAEVIALAVDSLQKVGLK--NFEVCIGQVDFINGIMQ 181

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++GL  + +L                    ++  L +    +  +  +   L  +  + +
Sbjct: 182 QMGLSQEKQLQ-------------------IRQALEQRNLVDLTNAVEDTKLPKQAKEAL 222

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            S   +  ++ + E+   +       K  + L  I  L++     ++ +K    ++R  +
Sbjct: 223 KSIPMLQGKEEVLEIANNLALNEQSRKALDNLHDIYTLLKAYN-LADFVKFDLGVIRDFD 281

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++E                   + GGGRYD ++S F   + PATGF++GI RL++
Sbjct: 282 YYTGMIFEVYAPMIGY----------PICGGGRYDKMLSDFG-TDCPATGFAMGIERLML 330

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL    +      +     I    + SD L+        LR  G   E+ L +      Q
Sbjct: 331 ALDKQNNIDEIASDENQKDIYVA-YTSDKLNDAIALVNELRAEGKVVELALTNQTKAQAQ 389

Query: 421 L 421
           L
Sbjct: 390 L 390


>gi|85375679|ref|YP_459741.1| histidyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|122543161|sp|Q2N5U7|SYH_ERYLH RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|84788762|gb|ABC64944.1| Histidyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 449

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 85/436 (19%), Positives = 156/436 (35%), Gaps = 51/436 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KKT    +  RG  D  + +      ++++   + + Y F  +E P+ E ++   + +
Sbjct: 1   MSKKT---PQAIRGTQDIFSADAEAFAFVVETFERVRKLYRFRRVEMPVFEKTEVFSRAI 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K ++S +D  G  ++LR + TA +AR    N      P +    GP+FR E+
Sbjct: 58  GETTDVVSKEMYSFEDRGGDSLTLRPEFTAGIARAFLTNGWQQHAPLKVATHGPLFRYER 117

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q D + +G++   AD E+  M   T+  +GI+    H+            
Sbjct: 118 PQKGRYRQFHQIDAEIIGAAEPQADVELLAMADQTIRGLGIEGVTLHLNTLGDAESREAW 177

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +    +    +    + D  ++     +++L  + R D                  
Sbjct: 178 RAALV----EYFRAVASELSEDSQERLEKNPLRILDSKDRRDQQF---------LADAPR 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + +FLS         +   +       +    L                       VRGL
Sbjct: 225 IDAFLSDTARAFFESVTTGLDAAGVKWQRAESL-----------------------VRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY    +E  +         K     ++ GGGRYDGL+    G   PA G++ GI RL 
Sbjct: 262 DYYRHTAFE-FIPDEGSEAAGKLGSQSTILGGGRYDGLMESLGGAPTPAVGWAAGIERLA 320

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + +                 I  +          ++  Q LR + I AE      +    
Sbjct: 321 MLVGGAGFDP---------PIVVLAEHEHLFDTARLVVQALRLSEITAEAEFRYRRT-NK 370

Query: 420 QLKYADRRNCPLAIIQ 435
                 +    + ++ 
Sbjct: 371 AFDKFKKTGTDVFLVV 386


>gi|222823750|ref|YP_002575324.1| histidyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782323|sp|B9KG88|SYH_CAMLR RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|222538972|gb|ACM64073.1| histidyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 408

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 90/461 (19%), Positives = 170/461 (36%), Gaps = 56/461 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D    +  +  +++ +   + +NYGF  I  P LE +    + + +  D   
Sbjct: 2   INALKGMKDLQDDQATLYEKVVKTCEEVAKNYGFTFINCPHLELTKLFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D  G  + LR + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFVDKAGNDVCLRPEGTAGVVRSYIEAKMDKNQSVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V++ G  +   DA + +M+ +  + + I  N     +  ++ +    EK+    
Sbjct: 122 EFHQFGVESFGVESVYEDASIILMLDEIFKRLKIHTNLKINSLGCKECMGVYKEKLIAFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + K           D L +  L  +++L  + + D+  +  K A         +   L  
Sbjct: 182 NSKDG------FCEDCLRRKELNPIRVL--DCKNDHCQNLIKNA-------PKLSENLCP 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K   +L +++       +   +L                       VRGL+YY+   
Sbjct: 227 CCKKDYEKLQKILSENGIEFECDEKL-----------------------VRGLDYYSKSA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     +V GGGRYD L+    G++    GF++GI R++  L+  +
Sbjct: 264 FEFI--------SDEIGAKAAVAGGGRYDRLIEYLDGKSGYGVGFAMGIERIMAILEQKQ 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   +         LR    +  +    +K     L  AD 
Sbjct: 316 DIKKRN------GIYLCAMDEAYIDTIFKLANTLRKK-HKVYLSY-EAKKLAKHLNQADN 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            N  + +  G  E  +  +  K+L   +  + +I N E+  
Sbjct: 368 ANAKIFLCIGEDEMQKEEIFYKNLDTKENKNIKIANLENEL 408


>gi|317124972|ref|YP_004099084.1| histidyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315589060|gb|ADU48357.1| histidyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 452

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 132/456 (28%), Positives = 195/456 (42%), Gaps = 45/456 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +     GF +    E  +  R LD IR  +E +GF  IET  +E  D L     D D   
Sbjct: 13  KVTPISGFPEYLPAERIVEQRFLDVIRETFELHGFSSIETRAIEPVDRLLGKGGDTD--- 69

Query: 68  KGVFSLQ----DD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           K ++ +     D+ +G    L +DLT P ARYV EN   + FP R Y+I   +R E+   
Sbjct: 70  KEIYGVSRLAGDEAEGAKWGLHFDLTVPFARYVLENAGKLSFPFRRYQIQKAWRGERPQE 129

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR+R+F Q D+D V     +   E  M +            D+ I +NNRKI +G  + I
Sbjct: 130 GRYREFTQADIDVVDVGQLSPHFEAEMPLVIADVFSRFPVGDFVIQVNNRKIPNGFYQGI 189

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G      L +    LR +DKLDK G   V  LL E               T +Q D+ ++
Sbjct: 190 G------LTDVPTTLRIVDKLDKIGPTKVAELLVES------------GATPQQADLCLA 231

Query: 243 FLSIDLEK--SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             +I  E    +  + EL       ++G   L  +        +   ++     I RGL+
Sbjct: 232 LAAIRTEDLGFVDRVRELGVTHPLLDEGLESLSTVIR--TAMAHAPGKVVADLRIARGLD 289

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG VYE                +GS   GGRYD L S  +    P  G SIG+SR++ 
Sbjct: 290 YYTGTVYETQFIG--------HEEWGSFCSGGRYDALASDGRNT-YPGVGISIGVSRILG 340

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L      T +      VL+   D +S   S            G+  E+   +++ FG Q
Sbjct: 341 LLVGQGLVTASRSTPAAVLVALTDDESRDRSVAVAAALR--ARGVSCEVAPAAAR-FGKQ 397

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           ++YA+RR  P     G GE      ++KD+  G+++
Sbjct: 398 IRYAERRGIPYVWFPGAGESGD---EVKDIRTGEQV 430


>gi|121533540|ref|ZP_01665368.1| Histidine--tRNA ligase [Thermosinus carboxydivorans Nor1]
 gi|121308099|gb|EAX49013.1| Histidine--tRNA ligase [Thermosinus carboxydivorans Nor1]
          Length = 395

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 86/407 (21%), Positives = 165/407 (40%), Gaps = 41/407 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  + +   ++P G  D   ++ + +  +  ++  ++  +G+D + TP  EY D L   +
Sbjct: 1   MS-QNEFVPQIPYGTRDFLPRDAKKKRLVESALAGLFTRWGYDEVITPTFEYLDIL--SV 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             +    + +F   D + + ++LR D+T P+AR  A        P R + +  VFR E+ 
Sbjct: 58  GADQELVQHMFKFLDKNNRLLALRPDMTTPIARVAATRLREQPAPLRLFYLTNVFRYEQA 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G +   ADAE+  + A  +   G+      I +   + ++G++ 
Sbjct: 118 QAGRQCEFYQAGVELMGMAGPAADAEVVALAAAAMREAGLTVFQ--ISLGQVEFINGLMN 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +  L   ++                     +K  L +       +    ++L+     + 
Sbjct: 176 ECELPQAERQR-------------------IKNCLVQRDLVGLDEALAASSLSPAGQVLF 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +   ++M +    +       +  + L  I  L+   G  S  +     I+R  +
Sbjct: 217 KRIPLLHGRENMLDAAYGMVSNDMSRRALDNLAEIYRLLEYYGV-SGHVSFDLGIIRNFD 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E             P +   + GGGRYDG+V  F     PATGF++GI RL++
Sbjct: 276 YYTGAVFEGYT----------PGLGFPLCGGGRYDGMVGAFG-VEYPATGFALGIERLML 324

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           AL+    + +   +        +      L++       LR AG   
Sbjct: 325 ALERQGLTPDGNAKD-----VYIGWAPGRLNEAIALAGELRAAGRIV 366


>gi|163846838|ref|YP_001634882.1| histidyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|163668127|gb|ABY34493.1| histidyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
          Length = 484

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 102/502 (20%), Positives = 169/502 (33%), Gaps = 75/502 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +L RG  D    E      I   +      YG+  I+TP++E+ +   + L ++     
Sbjct: 7   IDLVRGMRDVHPAEFAHGRYIQRILEQTMAGYGYQMIDTPVIEHRELYLRKLGEDLVGKV 66

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             FS     G+ ++LR + TA + R    +      P R    GPVFR E+     +RQF
Sbjct: 67  YEFSF---GGRDLALRPEWTASVLRAYVASMQDQPLPLRLSYAGPVFRYERPQRYTYRQF 123

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G     ADAE+  +    L+AVG+   +Y + I +  +   +L +  L    
Sbjct: 124 TQVGGEIIGGLPPRADAEVIALACAGLQAVGVT--EYTVRIGHIGLARELLSRFALPERT 181

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +      + R    L   G+  V+  +              A L  EQ    +  +   +
Sbjct: 182 RGLLVWSLER----LRAEGIAPVRERVLANLGTPPEGLELPAGLDDEQAARWLERVLTAM 237

Query: 249 EKSM--------------------------------------------HELYELVKGTIA 264
           +  +                                                 ++     
Sbjct: 238 QIDLRTGTRSPAEVLQRLLRTLRRADEQPLVEAALEQLARLAAISGPPEHAIPMLADLPG 297

Query: 265 GE-KGFNELVVISELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKP 322
            E   F EL  I  L+      + R+ I   + R    YYTG ++E              
Sbjct: 298 SESAAFRELQAILNLLAAYHIPAERVVIDGALGRRGLHYYTGLIFEIY-----------D 346

Query: 323 VVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                + GGGRYD LV      Q  PA GF+ G       L+ + ++        P  + 
Sbjct: 347 REGNQLCGGGRYDDLVGALGGRQATPAVGFAYG-------LERVTAAATTGSGESPTTVL 399

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
                 D         + LR  G    + +   ++  + L+ A RRN    +I G  ER+
Sbjct: 400 VAAVSDDDYPYALHVAERLRAGGYIVVLDV-RGRSVKDNLRDATRRNYSAVVIVGAAERA 458

Query: 442 RGMLQIKDLAKGKELSREIKNN 463
              +  +DLA   E    I   
Sbjct: 459 GEYVIWRDLATRSERQIPIAML 480


>gi|311742337|ref|ZP_07716146.1| histidine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313965|gb|EFQ83873.1| histidine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 439

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 111/475 (23%), Positives = 188/475 (39%), Gaps = 54/475 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
               GF +    E  +   +LD +R+ +E +GF  +ET  +E  D L +        +K 
Sbjct: 2   SRLSGFPEYLPAERAVEQSVLDHLRSTFELHGFASVETRAVEPMDVLLRKGE----IDKE 57

Query: 70  VFSLQ--------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           V+ L+        D  G  + L +DLT P ARYV EN   + FP R Y++  V+R E+  
Sbjct: 58  VYLLRRLHAEETDDHAG--LGLHFDLTVPFARYVVENAGELDFPFRRYQVQKVWRGERPQ 115

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GRFR+F Q D+D VG     A  ++ +         G+      + ++NRKIL+G    
Sbjct: 116 QGRFREFTQADIDIVGRDTLPAHFDVEIAQVMAEALGGLPIPGAVLQVSNRKILEGFYLG 175

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +G+     + +                  V   L +   +          L + Q +  +
Sbjct: 176 LGVADPTAVMQ------------------VVDKLDKLPGERITALLVEQGLGAAQAEACL 217

Query: 242 SFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +I    +  + ++  L        +G +EL  +   VR     +  ++    I RGL
Sbjct: 218 ALAAICTPDTSFVAQVQALGVDHPMLAEGLDELAGLVAAVRT--PPNVTVQADLRIARGL 275

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG V+E  L              GSV  GGRY+ L       N            + 
Sbjct: 276 DYYTGTVFETRLVG--------HEHLGSVCSGGRYEQLAR----DNRSTYPGVGISLGVS 323

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L  L +         P ++     D +  +        LR  GI  E+   ++K FG 
Sbjct: 324 RLLTPLFAGGLTASRSVPSVVLVALADEEDRAAATDTAARLRARGIATEVAPSAAK-FGK 382

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           Q+++A+RR  P     G+   + G  Q+KD+  G++++ +             Q+
Sbjct: 383 QIRHAERRGIPFVWF-GS---ADGD-QVKDIRSGEQVTADADTWSPDHRDLRPQV 432


>gi|74660781|sp|Q6E6B4|SYHC_ANTLO RecName: Full=Probable histidyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Histidine--tRNA ligase; Short=HisRS
 gi|47157003|gb|AAT12372.1| histidyl-tRNA synthetase [Antonospora locustae]
          Length = 445

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 116/490 (23%), Positives = 204/490 (41%), Gaps = 65/490 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    P+G  D   +E  + NR L ++  ++E +G   I+TP  E  + L     DE   
Sbjct: 1   MDLRTPKGTHDYGPRECYLLNRFLRAVTEVFETHGAACIDTPTFELRELLCNKYGDE--- 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--GPGR 124
           ++ +F L D  G   SLRYDLT   AR++A++    V   + ++IG VFR ++     GR
Sbjct: 58  SRLIFDLADQGGDICSLRYDLTVSFARFLAKHR---VQRLKRFQIGKVFRRDQPSVSKGR 114

Query: 125 FRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
            R+F+QCD+D         ADAE   +M++ L+ VG            R     IL  + 
Sbjct: 115 LREFVQCDLDIAGAYMEMVADAEAICIMSECLDRVG-------HRYQIRISSRKILNALM 167

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            H     N    V   IDK+D+     +   L            +   L   Q+ ++  +
Sbjct: 168 EHSGIGRNNFATVCSTIDKMDRLPWADIAAEL------------RTKGLVDGQVAVLKRY 215

Query: 244 LSIDLEKSMHELYE--LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           + +     + +      +     G+KG ++L ++ + +   G   +R  +  ++ RGL+Y
Sbjct: 216 VCVSGGIEVIDTLRSGELYLYSDGKKGIDDLALLFKYLGIYGVG-DRAVVDLSLARGLDY 274

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV----PATGFSIGISR 357
           YTG ++EA L              GSV GGGRYD LVS   G+      P  GFS+G++R
Sbjct: 275 YTGVIFEAALVDFK--------DVGSVAGGGRYDNLVSSVLGKKSEWSVPCVGFSLGVTR 326

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           ++  +  ++      +      +         L +       L  AG+ AE F      +
Sbjct: 327 ILSVMLKVDR-----RRTTETEVFVGSSGGLLLEERMGVLSRLWRAGVAAETFYTRKYGY 381

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            + +++  + + P  ++ G  E +    ++                  + E R  Q+   
Sbjct: 382 ASLMEHVRKTDIPFFLLVGEKEIAENRFRL-----------------MYGEDRALQMYGD 424

Query: 478 ISELVSTVKK 487
           I  +V+ +K 
Sbjct: 425 IDTIVNFIKS 434


>gi|41614900|ref|NP_963398.1| histidyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|46396587|sp|P60922|SYH_NANEQ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|40068624|gb|AAR38959.1| NEQ102 [Nanoarchaeum equitans Kin4-M]
          Length = 404

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 118/459 (25%), Positives = 197/459 (42%), Gaps = 62/459 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            PRG  D   +   +   I+  I ++Y+ YGFDPI TP++EY D+L     +E    K +
Sbjct: 4   PPRGTKDFTPELAILWKEIVSKIESVYQKYGFDPIITPIVEYWDTLKGKYGEEAE-KKEI 62

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  +     +W +L+YD T PLARY A     +    + Y I   FR ++   GR+R+F 
Sbjct: 63  WRFRVPQSKKWYALKYDQTVPLARYFARFRPKLP--FKRYTIDRTFRYDEPQKGRYREFW 120

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q D D VGS    ADAE+  MM +  E +G    + ++ +++R+ L+ ++EK+G      
Sbjct: 121 QADADIVGSPYPEADAEILNMMIEAYETLGF---NVYLRVSDRRALESLIEKVGEKDK-- 175

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               + + R IDK DK G +GV   L +                +++ + ++  L  + E
Sbjct: 176 ---FIEIARIIDKWDKIGEEGVLEKLKQ---------------ITDKAEKIIELLKENPE 217

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +                    E   I +LV K             + RG +YYTG VYE 
Sbjct: 218 EF----------------YPKEFWEIIDLVEKKNKIKID----IKLARGFDYYTGMVYEV 257

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            ++GGGGRYD L+  F  + +PA G SIGI+ LI          
Sbjct: 258 ----------WIEGFNRALGGGGRYDNLIGIFSKEKIPAVGGSIGINPLIDVGLEKGIFN 307

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            N K    + +  +    +   +       LR  G+   + L   ++F  Q++Y   ++ 
Sbjct: 308 LNKKTYTQIAVIYI----EVFKEAWRIANKLRDLGLNVYIDL-LRRDFKKQMEYVIEKDI 362

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              +I G  + +  ++  +D    +     I+N E  + 
Sbjct: 363 RYLVIVGKKDLANNLVTFQDRLTRERKKIPIENLEEIKS 401


>gi|329765885|ref|ZP_08257451.1| histidyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137728|gb|EGG41998.1| histidyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 416

 Score =  173 bits (438), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 99/451 (21%), Positives = 192/451 (42%), Gaps = 42/451 (9%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
             D   +E      I +  + +   YGF  ++   +E    L        +    ++  +
Sbjct: 1   MKDFEEQESANIEHIREHFKKLSNLYGFSFVDPSPIELLSVLETKSGPAIKD--EIYYFK 58

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
           D   + ++LR+D T  L RY A    ++  P +    G VFR ++   GR+R F Q DV+
Sbjct: 59  DKGDREVALRFDFTVGLTRY-ATLQKSMRLPAKFSAFGGVFRYDEPQKGRYRYFHQWDVE 117

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
             G     ++AE+  + +   +++ +K  D  I IN+R +++  + +     D +L    
Sbjct: 118 IYGKPGLESEAEIIELTSRLFDSLLLK--DIVIDINHRNLVESFINQTFDSKDSQL--VG 173

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
            +LRAIDK+ K   Q +     +                 ++++ ++ F  I    ++ E
Sbjct: 174 DMLRAIDKIQKKSKQEILNEFKDRY-------------DVDKLETILEFSQIKG--TISE 218

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +      +    + ++EL  + + +   G  + RI     IVRGL+YY+G V+E      
Sbjct: 219 VESKFDTS--ILQSWDELKQLFDSLENRGVVNTRINFG--IVRGLDYYSGTVFEVF---- 270

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
                 K    G++ GGGRYD L   F  +++ ATG + G+ R+I+ ++        + +
Sbjct: 271 -----DKNSTLGALAGGGRYDSLTKAFGREDIGATGVAGGVERIILTMQEQGI----VSD 321

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              + ++ +  + +        T +LR   I   + L S KN   Q++ A   +    II
Sbjct: 322 SKQIRVSVLYINEEMQKVAMSITSLLRLNNIPTNIDL-SGKNLKKQMEQA--SDSKFCII 378

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNES 465
               E  +  + ++++  G E   EI+    
Sbjct: 379 VAPKELEQSKVVLRNMQDGTESQIEIEKLTE 409


>gi|124027827|ref|YP_001013147.1| histidyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978521|gb|ABM80802.1| Histidyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 430

 Score =  173 bits (437), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 96/462 (20%), Positives = 180/462 (38%), Gaps = 41/462 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
             ++  E  RGF D    + +    +      + E +G++ +  P LE  +       +E
Sbjct: 2   PARIPLEPLRGFRDILEPDSKALTLLAQKFAKLAELHGYEEVIPPTLERFELFALKSGEE 61

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            R    ++  +D  G+ ++LR + TA +AR   ++      P + Y I   FR E+    
Sbjct: 62  IRRT--MYVFRDKAGREVALRPEATASIARIYLKHLRARPKPIKLYYIVNCFRYEEPQRA 119

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F Q  V+ +G+     D +   ++     ++G+  +D  + +   K+   +  K G
Sbjct: 120 RYREFWQAGVEYLGAEGVEGDFDPIKLLVAFYNSIGM-LDDISLKLGTTKLYRILFGKYG 178

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +  + +      +L  +DK           L+ E    +     +        +      
Sbjct: 179 VDEELQ----DHILHLMDKKMY---NEALALVEEKVGRDLASLLEELWRNPADL------ 225

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                     E      G     +   EL  I+ L++        ++++ +  RGL YYT
Sbjct: 226 ----------ENAREAVGDPEAARAVEELQTIASLIKTYNTR-IEVRVNLSFARGLAYYT 274

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G +YE       ++          + GGGRYD L+  + G++VP TGF+IG+ R + ALK
Sbjct: 275 GIIYEVETKAIPVS----------IAGGGRYDNLIELYGGEHVPGTGFAIGLDRTLAALK 324

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
            L      + +  PV    +   ++ L         L    I + M +         L +
Sbjct: 325 ELSKLDKLLAK--PVRAAIVALSTEVLPYAAEIQDELVRMNIASTMLVEQ--KLHKALAW 380

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             R+    A+I G  E+    L I+DL K  + + E    + 
Sbjct: 381 IARQGYRYAVIIGKKEQEEQTLTIRDLEKHLQKTIEYSMLKE 422


>gi|229820494|ref|YP_002882020.1| histidyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566407|gb|ACQ80258.1| histidyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 450

 Score =  173 bits (437), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 133/480 (27%), Positives = 206/480 (42%), Gaps = 46/480 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R     GF +   ++  +  +ILDS R  +E +GF  I+T  +E    L +        +
Sbjct: 3   RPTPLSGFPEWLPQQRVVEQQILDSFRRTFELHGFAGIQTRSVEPLTELLRKGD----TS 58

Query: 68  KGVFSLQDDDGQ-------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           K V+ L    G+        + L +DLT PLARYV EN   + FP + Y+I P +R E+ 
Sbjct: 59  KEVYVLGRLQGEGEPTESARLGLHFDLTVPLARYVLENAGKLDFPFKRYQIQPAWRGERP 118

Query: 121 GPGRFRQFIQCDVDNVGSS--AETADAEMCMMMADTLEAV-GIKRNDYHIGINNRKILDG 177
             GRFR+F Q D+D VG        + E+ ++ A+ L  +         + +NNRK+ +G
Sbjct: 119 QEGRFREFWQADLDVVGDGDLPYHYEVELPLVAAEALGELRRFGVPPVRVLVNNRKVAEG 178

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
               IGL   D++      LR IDKL K G Q V  +L E    +         L +   
Sbjct: 179 FYRGIGLEAVDEV------LRIIDKLGKVGPQVVAQMLAEEAGASPAQAAACLELAA--- 229

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV--RKSGYNSNRIKISSTI 295
                 +S   +  +  +  L +   A     +  +     +    +      +     I
Sbjct: 230 ------ISGSDDGVIDAVRALAQTHGASSDLLDVGLAELGALVTAAARRAPGVVVADLAI 283

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
            RGL+YYTG VYE +L              GS+  GGRYD L S       P  G SIG+
Sbjct: 284 ARGLDYYTGSVYETVLVG--------HEDLGSICSGGRYDTLASDGAHT-YPGVGLSIGV 334

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           SRL+  L S +      K    VL+   + ++ + S        LR  GI A++   ++K
Sbjct: 335 SRLVSRLISADLVRATRKVPTAVLVAVANEEARATSDA--VAAALRLRGIPADVAPTAAK 392

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            FG Q+++ADRR  P     G         Q+KD+  G ++  E  + E   E  + ++ 
Sbjct: 393 -FGKQIRHADRRGIPFVWFPGDDGAPD---QVKDIRSGDQVDAEAASWEPPPEDVLPRVE 448


>gi|85709578|ref|ZP_01040643.1| Histidyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85688288|gb|EAQ28292.1| Histidyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 411

 Score =  172 bits (436), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 92/435 (21%), Positives = 163/435 (37%), Gaps = 50/435 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T    +  RG  D    +      ++++   + + Y F  +E P+ E ++   + +
Sbjct: 1   MSKNT---PKAIRGTQDIFGADAEAFAFVVETFERVRKLYRFRRVEMPVFEKTEVFSRAI 57

Query: 61  PDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D  +K ++S +D  G  ++LR + TA ++R    N      P +    GP+FR E+
Sbjct: 58  GETTDVVSKEMYSFEDRGGDSLTLRPEFTAGISRAFLTNGWQQHAPLKVATHGPLFRYER 117

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR+RQF Q D + +G++   AD E+  M    L+ +GI+    H+        D   
Sbjct: 118 PQKGRYRQFHQIDAEIIGAAEPQADVELLAMADQLLKELGIEGVTLHLNTLG----DAQS 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                 G  +    +    + D  ++     +++L  +   D                  
Sbjct: 174 RDAWRAGLIEYFGAVKGELSEDSQERLEKNPLRILDSKDPRDKVF---------VADAPK 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + +FLS D       +   +       +    L                       VRGL
Sbjct: 225 IDAFLSDDALAFFGAVTSGLDAAGVKWERAESL-----------------------VRGL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY    +E  +               +V GGGRYDGL+    G   PA G++ GI RL 
Sbjct: 262 DYYRHTAFE-FIPDEGSAAAGALGSQSTVLGGGRYDGLMESLGGPATPAVGWAAGIERLA 320

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + +               ++I   D    +L +     +  R AG+ AEM   +  +   
Sbjct: 321 MLVGEKAEEP------ADLIIVVEDRSEAALVRATSALKSARLAGLSAEMI--AEGSPRK 372

Query: 420 QLKYADRRNCPLAII 434
           +   A +R  P AI+
Sbjct: 373 RYDKAVKR-SPRAIV 386


>gi|153951862|ref|YP_001398307.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166227958|sp|A7H477|SYH_CAMJD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|152939308|gb|ABS44049.1| histidyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 408

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 92/458 (20%), Positives = 169/458 (36%), Gaps = 56/458 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
               +G  D   K+     +++ +   + +NYGF  I TP LE      + + +  D   
Sbjct: 2   INALKGMKDLLDKDAYYYEKVIQTCEEVVKNYGFTFINTPHLELCILFKRSVGESSDIVG 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D     + +R + TA + R   E          R +  G +FR E+   GR R
Sbjct: 62  KEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKRWFYHGSMFRYERPQKGRLR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V++ G+++   DA + +M+ +    + IK       +   + +    E +    
Sbjct: 122 EFHQFGVESFGNASVYEDASIILMLVEIFSRLDIKFKLLINSLGCLECMPKYRENLIHFL 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D K           D L +  L  +++L  + + ++       A L       +   L  
Sbjct: 182 DSKEG------FCEDCLRRKNLNPIRVL--DCKNEHCQSLLNDAPL-------LNQNLCS 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +K    L  ++K      +  ++L                       VRGL+YY+   
Sbjct: 227 SCQKDFEILQSVLKENGVDFEVDSKL-----------------------VRGLDYYSKTA 263

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E I          +     ++ GGGRYD L+    G++    GF++GI R+I  L+  E
Sbjct: 264 FEFI--------SDEIGAKAAIAGGGRYDRLIEYLDGKSGFGIGFAMGIERIIAILEQKE 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                        I     D   + K       LR    +  +    ++     L+ AD+
Sbjct: 316 EKVQRE------GIYLCAMDKIYIQKLLHIATNLRKE-HKVLLSY-EARKLAKHLENADK 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            N  + +  G  E     L  K+L K +E   +I + +
Sbjct: 368 NNAEIFLCMGENEVQNESLFYKNLVKKEEKMIKISDLK 405


>gi|294790955|ref|ZP_06756113.1| histidine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458852|gb|EFG27205.1| histidine--tRNA ligase [Scardovia inopinata F0304]
          Length = 464

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 127/476 (26%), Positives = 213/476 (44%), Gaps = 47/476 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK         GF +    E  +   ++D++R ++E +GF  IET  +E   SL K  
Sbjct: 1   MAKKGA----SISGFPEWLPAERVVEQGVIDTLRRVFELHGFLGIETRAVESGASLLKKG 56

Query: 61  PDEDRPNKGVFSL-------QDDD---GQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
                 +K ++ L       QDDD    + + L +DLT PL+RYV EN   +VFP + ++
Sbjct: 57  E----TSKEIYLLSRLQEFGQDDDTPVEEHLGLHFDLTVPLSRYVVENSGDLVFPFKRWQ 112

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM--CMMMADTLEAVGIKR-NDYHI 167
           I  V+R E+   GR+R+F Q D+D VG+ +     ++   ++M + LE +      +  +
Sbjct: 113 IQKVWRGERPQEGRYREFTQADIDIVGNGSLPDHYDVDAPLVMVEALEGLRPFGLPEATV 172

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
             NNRK+ +G    IG+   D +  ++  L   DK+    +  +         D +    
Sbjct: 173 HANNRKLSEGFYRGIGIDNVDDVLHQVDKL---DKIPAIEVSQLLQSEAGCTPDQAAACL 229

Query: 228 KGANLTSEQIDIMVS-FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
             A L +   D +   F S+  ++ + +  +         +G   L +I +    +    
Sbjct: 230 ALAELQASDGDQLRQTFTSLCSQQGIDQTSD---AYQMAAEGMETLAMIID--EAARIRP 284

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             +     I RGL+YYTG VYE  L              GSV  GGRYD L S+   +  
Sbjct: 285 GSVIADLRIARGLDYYTGSVYETFL--------DGAESLGSVCSGGRYDNLASQGS-RKY 335

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           P  G SIG+SRL+  L     +T +      VL+   + +  S+S +      LR+ GI 
Sbjct: 336 PGVGLSIGVSRLVSYLLHSAGATTSRVSAAAVLVAVWNEEERSVSDH--IASSLRSRGIA 393

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQG-TGERSRGMLQIKDLAKGKELSREIK 461
           A++   ++K  G Q+KYAD+   P         E      Q+K++  G++ + ++ 
Sbjct: 394 ADVAPTAAK-LGKQIKYADKLGIPYVWFPAQEDEPD----QVKNIVTGEQTAADVS 444


>gi|289644161|ref|ZP_06476253.1| histidyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289506011|gb|EFD27018.1| histidyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 439

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 125/478 (26%), Positives = 204/478 (42%), Gaps = 50/478 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  +  +R     GF +   +   +  R LD IR  +E YGF  +ETP +E  D L    
Sbjct: 1   MSNEQLVRPAPVSGFPEWLPEVRLVELRWLDEIRRAFERYGFCSVETPSVEALDVLLAKG 60

Query: 61  PDEDRPNKGVFSL-------QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
                 ++ V++L        DD    + L +DLT P ARYVA++F+ +VFP + Y++  
Sbjct: 61  E----TSQEVYTLRRLQADDGDDGDARLGLHFDLTVPFARYVAQHFNDLVFPFKRYQVQR 116

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R E+   GR+R+F QCD+D +         +  +         G+    + I INNRK
Sbjct: 117 VWRGERPQEGRYREFTQCDIDVINVDRVPLYFDAELPRIVHEILTGLGVPAWSININNRK 176

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L G    +G+       + L V R  DKLDK G  GV+ LL                LT
Sbjct: 177 VLQGFYAGLGID------DPLGVTRVADKLDKIGTAGVEKLLA-----------STLGLT 219

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            EQI   +    I    +    ++  L   +   ++G +EL  + + +      +  I  
Sbjct: 220 PEQITACLDLAHIRGGDAGVADDIRRLGVTSDLLDEGLDELSFVLDELSD--LPAGSIVA 277

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             +I RGL+YYTG VYE                +GS+  GGRY  L   F  +++P  G 
Sbjct: 278 DLSIARGLDYYTGTVYEGKFVDW--------PDYGSICSGGRYADLAGSFIRRHLPGVGI 329

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG++R+   L +             +L+        + ++           G   E + 
Sbjct: 330 SIGLTRIFAKLLAEGRLETAASCPSDILVVLPSDARRAEARAAAAHLR--ARGYNVETYH 387

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWRE 468
            + K  G Q++YA R+  P            G   ++K++A G++L+    + ++W  
Sbjct: 388 EADK-LGKQIRYASRKGIPFVWFPP---FEDGKPHEVKNMASGEQLT---ADPQTWHR 438


>gi|12044885|ref|NP_072695.1| histidyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660163|ref|ZP_05405572.1| histidyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351157|sp|P47281|SYH_MYCGE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|3844645|gb|AAC71251.1| histidyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078911|gb|ABY79529.1| histidyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 414

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 95/454 (20%), Positives = 171/454 (37%), Gaps = 62/454 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D    E+   N I+  IR++  N+GF  ++TPL E +    +   + D   K
Sbjct: 4   LQKPRGVKDWFGDELVYFNWIVKKIRSLAFNWGFSEVKTPLFENAQLFQRSNANADIVQK 63

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAEN--FDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            ++   D   + ++LR + T P+ R   EN       FP + + IG ++R E+    RFR
Sbjct: 64  ELYQFFDKSQRELALRPEATTPIVRLACENKLMQEANFPLKLFCIGSMYRYERPQNNRFR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKI 182
           +  Q   +  G S      +  +     LEA+GI     + +           +  L+  
Sbjct: 124 EHWQFSCEVFGFSNLFIFLDTLLFANSLLEALGITGYVLKINNLANFETLSKWNKALKDY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                 +L E          L +  L+   L + + + D    F K A         +  
Sbjct: 184 LTPYKLELTE----------LSQKRLEKNPLRILDDKIDQKKSFVKNA-------PKITD 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL    ++    L   +K                         +   + +  +VRGL+YY
Sbjct: 227 FLDASAKQDSELLKTQLKKH-----------------------NISFEWTDNLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG V+E +                ++  GG YD LV        PA GF+ GI RLI  L
Sbjct: 264 TGFVFEYV------------KNQDTILAGGVYDNLVEELSSNPTPALGFACGIERLINCL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +     +   +L+  +    ++L +     ++ R    +  ++    K   N ++
Sbjct: 312 EIDKKAFILNTKPKQMLVICL--FEEALEELVWLAKLWREYN-QVTIYPKVIK-VDNGIR 367

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            A+R       I G  +  +  + IK+L   ++ 
Sbjct: 368 LANRLGYTFIGIVGKTDFDKKAITIKNLVSKQQT 401


>gi|269987005|gb|EEZ93280.1| histidyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 410

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 116/481 (24%), Positives = 203/481 (42%), Gaps = 72/481 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +  +G  D       +R + L+SIR  YE +GF+PIETP  EY          E     
Sbjct: 2   IDRVKGVRDFIGITAVLRQQALESIRKSYELFGFEPIETPSFEYLSLFTNKSGPE--IES 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++S +D  G+ ++LR + T    R V+ N  ++VFP R Y IG V+R E    GR+R+F
Sbjct: 60  QLYSFEDKKGEKLALRPEHTISKLRVVSGNK-SLVFPLRAYSIGNVWRYEDTKKGRWREF 118

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           IQ D+D  GS+    D+E+   +   ++ +G    +Y I ++NRKIL  ++E + +  + 
Sbjct: 119 IQADIDIFGSADIKYDSEIIACIDFAIKRLG--IENYKINVSNRKILTSLMESLKVEVE- 175

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              + + VLR IDK+ K GL  V   + E              +   + + +  +L+   
Sbjct: 176 ---KIVQVLREIDKVHKVGLDEVIKRISEL-------------IGETKAEKVRDYLNGK- 218

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                         I G +G  ++  +   ++K  Y    +    ++VRG +YY G ++E
Sbjct: 219 -------------EIPGIEGIKDVEYLISDLKK-NYGIEGVYFDRSLVRGQDYYDGSIFE 264

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                  +           + GGGRYD +  +F   + P +G +IG   ++  L S    
Sbjct: 265 FEFTEGELKG-------VVLAGGGRYDKISMKFD-SDFPISGGAIGFDVIMEVLVS---- 312

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
             N K      +  +  D   L   +     LR  G+  ++ L  +      L Y + + 
Sbjct: 313 --NYKNKFYKTLCVLSVDD--LETSRKIAASLRKEGLVTDIILEDTP-LSKGLNYCNSKK 367

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
              AII G  +    ++ ++DL   +E+                     +  LV  +K +
Sbjct: 368 IKYAIIVGKRDLKDNLVTVRDLESKREMKF------------------KLDSLVEEIKNL 409

Query: 489 L 489
           +
Sbjct: 410 I 410


>gi|197116951|ref|YP_002137378.1| ATP phosphoribosyltransferase regulatory subunit [Geobacter
           bemidjiensis Bem]
 gi|197086311|gb|ACH37582.1| regulatory subunit of short ATP phosphoribosyltransferase
           [Geobacter bemidjiensis Bem]
          Length = 440

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 96/485 (19%), Positives = 184/485 (37%), Gaps = 60/485 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M   + + A LP+G +D   +       I DSI  ++E +GF  + TPLLE+   L   L
Sbjct: 1   MTNPSCIEAPLPKGVSDFLPETADKITFIADSIHRVFELWGFRRMITPLLEFEHVLA--L 58

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              D      F   D   G+ +++  D+T  +AR VA     +  P R Y  G V R  +
Sbjct: 59  GMGDELRSKTFRFDDRQTGRLLAIPPDITPQVARIVATRMHALPLPHRIYYSGRVLRQAQ 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              G+ R+  Q  V+ +G  +  ADAEM  M  + L+ +G     + I +   +   GI+
Sbjct: 119 MQSGKSREIFQFGVELIGLDSPEADAEMVAMAVEVLKNLGFTG--FKIDLGQVEFYRGIM 176

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +  GL  + +                   + ++  + +          + A         
Sbjct: 177 DASGLSAEVQ-------------------KQLQEAISKKEVSAVRSILESAGAPDRVKQE 217

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +     +   + + +    + G     +  + L  + +++   G     + I    +RGL
Sbjct: 218 IALLPRLYGGREVLQEARSIAGNERSLRALDNLAQVVDILDIYGVAE-HLTIDLGEIRGL 276

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +Y++G  +E  +          P V  ++  GGRYD L +++          + G +  I
Sbjct: 277 DYHSGITFEGFV----------PGVGEAICSGGRYDDLTAKYGYPAH-----ATGFAFNI 321

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +AL +  S    ++          +   +   +     Q LR+ G      +   ++F +
Sbjct: 322 LALLASMSKRPEVEASSSRDFLIFNRKDERR-EALEVAQKLRSLGYTCARDII-KRDFDS 379

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
            L+YA + N  L ++ G  + + G L +            + + +S        IT+   
Sbjct: 380 SLEYAKKMNIRLLLVIGAEDCAAGQLYL----------VRVADRQS--------ITVSEE 421

Query: 480 ELVST 484
           EL   
Sbjct: 422 ELFDK 426


>gi|321310940|ref|YP_004193269.1| histidyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319802784|emb|CBY93430.1| histidyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 407

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 111/464 (23%), Positives = 186/464 (40%), Gaps = 66/464 (14%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           + PRG  D    EI     I   +R I E YG+  I TP  E+ +       D    NK 
Sbjct: 2   QKPRGTRDLFGTEIFRYREITSKLRRILERYGYTEIRTPTFEHKEVFLGCEDDFLLSNKE 61

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRI--GPVFRNEKHGPGRFRQ 127
           +F ++   G++I LR + TA +AR V EN               G  FR E+   GR+R+
Sbjct: 62  IFHIE--GGKYI-LRPENTASVARAVCENKLIHTEVLPLQYYYLGSFFRYERPQKGRYRE 118

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN---DYHIGINNRKILDGILEKIGL 184
           F Q  V+ VG ++   D E+ +++++ L + G+      +Y      +   +  L+    
Sbjct: 119 FTQFGVEKVGGASIEDDLEIILLVSEILRSFGLNLELSLNYLGNKEVKAAWNEQLKSYFR 178

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D+L+E           ++     +++L  +   D+  DF K A         + SF 
Sbjct: 179 PFKDQLSEVSR--------ERIDSNPLRILDDKE--DSKLDFVKNA-------PPIKSFF 221

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S   ++S+  + E +K +                               ++VRG++YYTG
Sbjct: 222 SDGDKESISRIEEFLKVS-----------------------RISFNWDPSLVRGIDYYTG 258

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +YE                  +V  GGRYD L + F   ++P+ GF+IGI R    L+ 
Sbjct: 259 LIYEWKYKDL------------TVIAGGRYDELFNGFG-ASIPSLGFAIGIERFKDLLEE 305

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
              +  N +     + + +  D++ L         +R  G       G + +    LK A
Sbjct: 306 CGYAWENREPRPIYIASLLGLDTNLLEA----ISTIRNNGFVVRTNWGIN-SIKKHLKRA 360

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                   +I G  ER  G + IKDL    E+S  +++ ES  +
Sbjct: 361 VALKSKAILIYGDREREEGRVTIKDLDSQAEVSISLRDTESLLK 404


>gi|315925070|ref|ZP_07921287.1| histidyl-tRNA synthetase [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621969|gb|EFV01933.1| histidyl-tRNA synthetase [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 415

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 123/448 (27%), Positives = 190/448 (42%), Gaps = 55/448 (12%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+ ++  RG  D    E+R+R+ +  +I  IY  +GF  IETP LE  D L       D
Sbjct: 2   EKISSKPVRGARDILPAEMRVRDHLEQTIAGIYRAHGFSRIETPALENIDLLL-GSEGGD 60

Query: 65  RPNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRI 111
              K +F++     +              I LRYDLT PL+R+ A N + +  P +  +I
Sbjct: 61  NL-KMLFTILKRGDKLAPKAGATSRDLCDIGLRYDLTLPLSRFYANNAEQLELPFKAIQI 119

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
           G VFR E+   GRFR F QCD+D +G    TA+ E+    A  L A G   +D+ I +N+
Sbjct: 120 GNVFRAERPQKGRFRAFKQCDIDIIGDPDVTAEIELIATTAKALMAAGF--DDFTIKVND 177

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
           R++L   +   G +  D       V  ++DK DK G  GVK  L E   D          
Sbjct: 178 RRLLTAFITAAGFNAGD----VGSVCISLDKADKIGTDGVKAELAEKGYD---------- 223

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
                  ++  F+    E ++  + + V G         +L  + E          RI+ 
Sbjct: 224 -----AAMVSDFVDAVAEVNLDNIDDRVDGA----AAVADLKRVIETTTALAAGRYRIEF 274

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T++RG+ YYTG V+E   G    +          + GGGRYD ++ R+   +VPA GF
Sbjct: 275 DFTLIRGMGYYTGQVFEVRWGDVGYS----------IAGGGRYDNMIGRYTKTSVPAVGF 324

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG  R++  L   E+     +                ++        LR AG    + +
Sbjct: 325 SIGFERIVGLLMEREAGAAKTERRA----ALFHRADADMAAVIAQADELREAGYSVNL-I 379

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGE 439
              K  G Q+ + +       ++ G  E
Sbjct: 380 TQKKKLGKQIGHCEAAGYAGFMVFGRDE 407


>gi|39998396|ref|NP_954347.1| ATP phosphoribosyltransferase regulatory subunit [Geobacter
           sulfurreducens PCA]
 gi|46395646|sp|P60837|HISZ_GEOSL RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|39985342|gb|AAR36697.1| histidyl-tRNA synthetase, putative [Geobacter sulfurreducens PCA]
 gi|298507338|gb|ADI86061.1| regulatory subunit of short ATP phosphoribosyltransferase
           [Geobacter sulfurreducens KN400]
          Length = 438

 Score =  170 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 168/439 (38%), Gaps = 42/439 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M   T + A LP+G  D   ++      I   IR ++E +GF  I TPLLE+ D +   L
Sbjct: 1   MTPITPIEAPLPKGVTDFLPEKADKIGYIEGKIRKVFELWGFRRIITPLLEFEDVIAAGL 60

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            D+       F   D   G+ I++  D+T  +AR VA        P R    G V R+ +
Sbjct: 61  GDD--LKAKTFRFDDRQSGKLIAVPSDITPQIARIVATRLRGYPLPHRICYSGRVLRHAE 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR R+  Q  V+ +G  +  ADAEM  M  + L+ +G +  D+ I + +   + GI+
Sbjct: 119 LQSGRSREIFQSGVELIGLDSPEADAEMVTMAVEALKGLGFR--DFKIDLGHVGFIRGIM 176

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                                  L+      ++  +G+            + L+    D 
Sbjct: 177 TA-------------------SGLEVAVRNRLQEAIGKKDVSAVRSILAESPLSDAAKDE 217

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + +   +   + + +    V       +  + +  + +L+   G  S+ + I    VRGL
Sbjct: 218 LAALPRLFGGREVLDEAGRVATNDTSRRALDNISQVLDLLDIHGV-SDHLTIDLGEVRGL 276

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +Y+TG  +E  +            +  +V  GGRYD L +R+          +     ++
Sbjct: 277 DYHTGLTFEGFVT----------GMGEAVCSGGRYDTLTARYGF----PAPATGFTFNVL 322

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L +LE   +         I   +   D   +     Q LR  G      +   +NF +
Sbjct: 323 ALLSALEKRPDVEASKTR-DILIFNQQDDRR-EALEIAQQLRRRGYTTARDIIR-RNFDD 379

Query: 420 QLKYADRRNCPLAIIQGTG 438
            L YA R N    ++ G  
Sbjct: 380 SLDYARRMNILHMMVVGGD 398


>gi|330901750|gb|EGH33169.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 357

 Score =  170 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 79/372 (21%), Positives = 143/372 (38%), Gaps = 45/372 (12%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++  +      ++  + +NYG+  I  P++E+++   + + +  D   K +++ 
Sbjct: 1   MNDILPEQTPLWRHFEGTVARLLDNYGYRQIRMPIVEFTELFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D +G  ++LR + TA   R V E+  T      + + IGP+FR+E+   GR+RQF Q  
Sbjct: 61  ADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQKGRYRQFHQIG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           V+         DAE+ +M       +GI           R  +   L  +G         
Sbjct: 121 VEVFNLDGPDIDAELIVMTWRLWGLLGI-----------RNAVKLELNSLGTSEARARYR 169

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             +V     +LD+ G    + L             +   +  +    +  +L  +     
Sbjct: 170 DALVEYLSARLDQLGEDSQRRLKTNPLRVLDTKHPETQAVLVD-APKLADYLDDESRVHF 228

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             L   +                               I+  +VRGL+YY+  V+E +  
Sbjct: 229 EGLKARLDAA-----------------------GIPYVINPKLVRGLDYYSKTVFEWVT- 264

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                   +    G+V  GGRYDGLV +  G+     GF++GI RL++ L++LE     I
Sbjct: 265 -------DQLGAQGTVCAGGRYDGLVEQMGGKPTAGVGFAMGIERLVLLLETLEQVPEEI 317

Query: 373 KEMGPVLITTMD 384
                V +    
Sbjct: 318 ARQVDVYLCAFG 329


>gi|306818750|ref|ZP_07452472.1| histidine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307700757|ref|ZP_07637782.1| histidine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|304648436|gb|EFM45739.1| histidine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307613752|gb|EFN92996.1| histidine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 437

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 109/470 (23%), Positives = 190/470 (40%), Gaps = 51/470 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +   +E  + + +L +++ ++E +GF  +ET  +E    L K        ++ V++
Sbjct: 6   SGFPEFTPEEKILEDSLLATLQRVFELHGFSHLETRAVEPLSVLEKKGE----TSQEVYT 61

Query: 73  ---LQDDDGQW---ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              LQD D        L +DLT PL+RYV EN   + FP   Y+I  V+R E+   GRFR
Sbjct: 62  LSRLQDKDSHEPVKNGLHFDLTVPLSRYVLENAHLLQFPFMRYQIQKVWRGERPQEGRFR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+Q D+D +         E+   +        +      + +N+RKIL G    +G+  
Sbjct: 122 EFVQADIDMIARDTLPVHFEIEAPLIMAEALEALPIPQPVVHVNSRKILQGACNALGISE 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--L 244
            D + +                  V     +   +          L   Q+  +     +
Sbjct: 182 VDAVLQ------------------VIDKHDKVTPEVFSQMLLELQLDDAQVKTIWDLAGI 223

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S +  +    + +L       E+G +++  +    R  G     +     I RGL+YYTG
Sbjct: 224 SGNEPEVASRVRDLGLKDDLLEEGLDDVARMLVAARARGR--ENVVADFKIARGLDYYTG 281

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            VYE  +             +GS+  GGRYD LVS  K    P  G SIG++RLI  + +
Sbjct: 282 MVYETFITGAET--------YGSICSGGRYDNLVSEGKRC-FPGVGMSIGLTRLISIILA 332

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  +    P  +  +    ++  +       LR  G+  E+   ++K +G Q+KYA
Sbjct: 333 NN--WVEVSRSVPTAVLVLVDSEETRGESDQVAATLRQRGVCTEVSPTAAK-YGKQIKYA 389

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             R  P        E       +K++  G++   + +  E   +    Q+
Sbjct: 390 ANRGIPYVWFVSQRE-------VKNILTGEQAVADPQTFEFETQLLKPQV 432


>gi|227875439|ref|ZP_03993580.1| histidine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|227843993|gb|EEJ54161.1| histidine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
          Length = 437

 Score =  169 bits (428), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 109/470 (23%), Positives = 190/470 (40%), Gaps = 51/470 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +   +E  + + +L +++ ++E +GF  +ET  +E    L K        ++ V++
Sbjct: 6   SGFPEFTPEEKILEDSLLATLQRVFELHGFSHLETRAVEPLSVLEKKGE----TSQEVYT 61

Query: 73  ---LQDDDGQW---ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              LQD D        L +DLT PL+RYV EN   + FP   Y+I  V+R E+   GRFR
Sbjct: 62  LSRLQDKDSHEPVKNGLHFDLTVPLSRYVLENAHLLQFPFMRYQIQKVWRGERPQEGRFR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+Q D+D +         E+   +        +      + +N+RKIL G    +G+  
Sbjct: 122 EFVQADIDMIARDTLPVHFEIEAPLIMAEALEALPIPQPVVHVNSRKILQGACNALGISE 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--L 244
            D + +                  V     +   +          L   Q+  +     +
Sbjct: 182 VDAVLQ------------------VIDKHDKVTPEVFSQMLLELQLDDAQVKTIWDLAVI 223

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S +  +    + +L       E+G +++  +    R  G     +     I RGL+YYTG
Sbjct: 224 SGNEPEVASRVRDLGLKDDLLEEGLDDVARMLVAARARGR--ENVVADFKIARGLDYYTG 281

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            VYE  +             +GS+  GGRYD LVS  K    P  G SIG++RLI  + +
Sbjct: 282 MVYETFITGAET--------YGSICSGGRYDNLVSEGKRC-FPGVGMSIGLTRLISIILA 332

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  +    P  +  +    ++  +       LR  G+  E+   ++K +G Q+KYA
Sbjct: 333 NN--WVEVSRSVPTAVLVLVDSEETRGESDQVAATLRQRGVCTEVSPTAAK-YGKQIKYA 389

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             R  P        E       +K++  G++   + +  E   +    Q+
Sbjct: 390 ANRGIPYVWFVSQRE-------VKNILTGEQAVADPQTFEFETQLLKPQV 432


>gi|187735890|ref|YP_001878002.1| Histidine--tRNA ligase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425942|gb|ACD05221.1| Histidine--tRNA ligase [Akkermansia muciniphila ATCC BAA-835]
          Length = 424

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 98/461 (21%), Positives = 177/461 (38%), Gaps = 57/461 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +   GF D    +  +RN + ++ + +   YGF   E P +E ++   K    E    
Sbjct: 5   RFQPLPGFRDFAPADCAVRNYLFNAWKKVAHRYGFLEWEGPTVEATELYLKKSGGELPT- 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             +F   D   + I++R +LTA L R  A        P + + IG  FR EK   GR R+
Sbjct: 64  -QLFRFTDQGDRDITIRPELTASLGRIAAAYQREYTKPLKWFEIGSCFRYEKPQKGRLRE 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q + D +G ++  AD+E+  +  D +  +G  +ND+ + +++R+       + G+   
Sbjct: 123 FYQFNADILGEASAWADSELIALAIDCMRELGFTQNDFIVRVSDREAWIRFASEHGVQEQ 182

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D        L  +DK ++   +  +  L                        +V+F+   
Sbjct: 183 D----IPAFLGIVDKFERDRPEECQRKLDAFHISRG---------------DLVAFIENP 223

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
              +      L+K   A                        +K+  ++VRGL YYTG V+
Sbjct: 224 PAGASERYDILMKDLTA------------------RGLDGYVKLDLSVVRGLAYYTGLVF 265

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ--NVPATGFSIGISRLIVALKS- 364
           E                  +V GGGRYD LV        ++PATGF++G + +   ++  
Sbjct: 266 EIF---------DTQRSLRAVAGGGRYDTLVGALSNNAVDMPATGFAMGDAVITHLIEQT 316

Query: 365 --LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
               +  +         I  +       ++       LR  G   ++ L  +K    QL+
Sbjct: 317 PHARALKDAALASAGCDIFMVQASESRRAEVLAIVSALRDQGYSVDLPLTLTK-VNGQLQ 375

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            A +     A+I G  E    +++++DL         + + 
Sbjct: 376 KAVKSGARAALIVG-DEFP--VMELRDLGARTSSPVAMDDL 413


>gi|312132333|ref|YP_003999672.1| hiss [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773804|gb|ADQ03292.1| HisS [Bifidobacterium longum subsp. longum BBMN68]
          Length = 447

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 125/470 (26%), Positives = 201/470 (42%), Gaps = 45/470 (9%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDD----- 77
             R++D++R ++E  GF  IET  +E   SL K        +K ++    LQ+       
Sbjct: 2   EQRVIDTLRKVFELNGFIGIETRAVETGASLLKKGE----TSKEIYLLSRLQEVGHESDT 57

Query: 78  --GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
              + + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D 
Sbjct: 58  PIEERLGLHFDLTVPLSRYVVEHSGALAFPFKRWQIQKVWRGERPQEGRFREFVQADIDV 117

Query: 136 V--GSSAETADAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  G   +  + E+ ++M   LE +         +  NNRK+ +G    +GL   +    
Sbjct: 118 IGAGDLPDHYEVELPLVMVSALEELRAYGLPKATVHANNRKLSEGFYRGLGLTDVE---- 173

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKS 251
              VLR IDKLDK G   V  LL E              L               D    
Sbjct: 174 --GVLREIDKLDKIGADEVARLLTETCGATEAQARACLELAELTASDGAELAAKFDALCE 231

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            H + +  +      +G + L +I +    +      +     I RGL+YYTG VYE  L
Sbjct: 232 AHGIVKDSEAYTLARQGLDTLAMIVD--EAAAIRPGSVIADLKIARGLDYYTGSVYETFL 289

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                         GS+  GGRYD L S+   +  P  G SIG+SRL+  +     +  N
Sbjct: 290 DGAA--------SLGSICSGGRYDNLASQ-GNRKYPGVGLSIGLSRLVSYMLHTAGAHAN 340

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 VL+   + +             LR  GI  ++   ++K  G Q+KYAD+   P 
Sbjct: 341 RVSPAAVLVAVWNEED--RPAANRIANQLRARGIATDVAPTAAK-LGKQIKYADKLGIPY 397

Query: 432 AIIQG-TGERSRGM----LQIKDLAKGKELSREIKNNESWREARVAQITI 476
                   E + G      ++K++  G++++ +  + E   +  VAQ T+
Sbjct: 398 VWFPATAAESAEGAEPAGDEVKNIVTGEQVAADCTSWEP--DTVVAQQTV 445


>gi|184201003|ref|YP_001855210.1| histidyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581233|dbj|BAG29704.1| histidyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 452

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 132/481 (27%), Positives = 210/481 (43%), Gaps = 54/481 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M + T L      GF +   +E  +   ++DS+R  +E +GF  IET  +E  + L +  
Sbjct: 1   MARTTSL-----SGFPEWLPEERIVEQHVMDSLRRTFELHGFSSIETRAVETVEQLLRKG 55

Query: 61  PDEDRPNKGVF---SLQDDDGQW-----ISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
                 +K V+    LQ D  +      ++L +DLT P ARYV EN   + FP R Y+I 
Sbjct: 56  E----IDKEVYGVSRLQQDADEPNPEGALALHFDLTVPFARYVVENGGHLTFPFRRYQIQ 111

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GR R+F Q D+D VG        ++ + +        +    + + +NNR
Sbjct: 112 KVWRGERPQEGRAREFTQADIDVVGDGTLAFRYDVELALVIVDALSRLPIPPFVLRVNNR 171

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+ +G    +G      L +   VLR IDKL+K G   V   L E           GA  
Sbjct: 172 KLAEGFYRAVG------LTDAPAVLREIDKLEKIGADAVSRNLQEH---------VGATP 216

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
              Q  + ++ +  +    +  + EL +     E+G  EL  +      +     ++   
Sbjct: 217 EQAQAALALAAIRTEDTSFVERVRELGQSNELLEEGLAELAEVVG--EAARRAPGKVVAD 274

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            +I RGL+YYTG VYE +L              GSV  GGRY+ L S  K    P  G S
Sbjct: 275 LSIARGLDYYTGTVYETVLVG--------HEKLGSVCSGGRYESLASNGKKT-YPGVGLS 325

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG++RL+  + S   S  +     P  +    +D  S S  Q     LR  GI  E+   
Sbjct: 326 IGVTRLVTRILSQ--SMASASRAVPSAVLVALNDDASWSAAQDVATALRARGIATEVA-A 382

Query: 413 SSKNFGNQLKYADRRNCPLAII--QGTGERSRGMLQ--IKDLAKGKELSREIKNNESWRE 468
           +++ FG Q++YA+RR  P              G +   +KD+  G++++ +  + +   E
Sbjct: 383 TAQKFGKQIRYAERRGIPFVWFSTVAED----GSVTHEVKDIRSGEQVAADPASWQPPAE 438

Query: 469 A 469
            
Sbjct: 439 D 439


>gi|118576902|ref|YP_876645.1| histidyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118195423|gb|ABK78341.1| histidyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 417

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 86/455 (18%), Positives = 175/455 (38%), Gaps = 44/455 (9%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
             D  T E     ++ +       ++ F+ ++   +E   +L        R  + ++  +
Sbjct: 1   MRDLGTAEYSGIEQVRERFIRKARSFAFELVDPSPIELLSTLEAKSGPAIR--EEIYHFE 58

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
           D  G+ ++LR+D T  L R V  +  ++  P +    G VFR ++   GR+R F Q +V+
Sbjct: 59  DKGGRDVALRFDFTVGLTRLV-TSQQSLRLPAKFGSFGGVFRYDEPQKGRYRFFHQWNVE 117

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
             G     ++AE+    +    ++G+   D  + I++R +++  + K    G    +  L
Sbjct: 118 IFGRPGVESEAEVVEFASSLFGSLGL--GDVEMRISHRGLIESFIRKNHPSGPGAADAAL 175

Query: 195 IV-LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              LR +DK  K     +     +     + +    A                    S  
Sbjct: 176 PQLLRMVDKAAKKPRDALLAEYKDVPRPLAEELLDLA--------------------STR 215

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
              + V         ++ +  + + +      +  + +   IVRGL+YY+G V+EA+   
Sbjct: 216 GTPDEVGPAAGSLDSWDHVKQLWDSLEARSVPNVSVDLG--IVRGLDYYSGAVFEAL--- 270

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                       G++ GGGRYD L   F  +++ A G + G+ R ++A+++         
Sbjct: 271 ------DPRHGTGALAGGGRYDALARAFGREDMGAAGMAGGVERTVLAMEARGL----HA 320

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                +++ +        +       LR   I   + L + +    Q++ A        I
Sbjct: 321 SPPAPVVSVLYTGDAVRGRATTLASRLRAKDIPTAIDL-AGRPLKKQMESASAS--RFVI 377

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           I G  E     + ++++  G E   +I   ES  E
Sbjct: 378 IVGPRELEENRVVLREMDSGTESGADIDELESSPE 412


>gi|294660292|ref|NP_852966.2| histidyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286864|sp|Q7NBS9|SYH_MYCGA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|284811948|gb|AAP56534.2| Histidyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930431|gb|ADC30370.1| Histidyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 419

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 94/465 (20%), Positives = 173/465 (37%), Gaps = 50/465 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K        RG  D   + + + N I   I  + + Y F  I+TP+ E+++   + L
Sbjct: 1   MSNKQ---ITAVRGTTDWFDQAMILFNAISHKIIALSDLYTFQRIKTPVFEHAELFSRNL 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNE 118
              D   K ++ L D   + ++LR + TA + R V E+       +P + Y + P+FR E
Sbjct: 58  EHSDIVKKELYQLIDRSERKLALRPEGTASIIRAVNEHKLLDQNPWPLKLYYLEPMFRYE 117

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR R+F Q  ++ VG   +    +  +     L+            + N       
Sbjct: 118 RPQKGRMREFYQYGIELVGELDQLDYLQTILFAKKILDTFNFDCVLNINWLGNFASRKCW 177

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           +E++  +               D+L +  +  +         D+  +  K    ++  ID
Sbjct: 178 VEQLNQYFKQ----------YQDQLSELSVSRLDSYGVLRILDDKNESKKDFVRSAPTID 227

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             +S                            E     +L+ +      + K +S++VRG
Sbjct: 228 QFISL--------------------------EEQTQFKQLLEQLDQLGIKYKYNSSLVRG 261

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY+  V+E IL               ++ GGG Y  L++    + + A GF++ I R 
Sbjct: 262 LDYYSELVFEFILAN-------NDQAQSTLIGGGCYQNLIAELTNKPLKAIGFALSIERF 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I  L      +   ++  P  +      +  L+     +Q L     +       +K   
Sbjct: 315 ISYLDDKTKDSLINQDQKPRYLLINLVPNKELAT-LNLSQELINHNYQVYYQHKLNK-VD 372

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             +KYA R      II G  E S+  + IKDL+   + + + K  
Sbjct: 373 KAIKYALRAKFTHLIIMGNDEWSKQTMTIKDLSSQTQQTIKYKEF 417


>gi|296132355|ref|YP_003639602.1| histidyl-tRNA synthetase 2 [Thermincola sp. JR]
 gi|296030933|gb|ADG81701.1| histidyl-tRNA synthetase 2 [Thermincola potens JR]
          Length = 393

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 89/407 (21%), Positives = 171/407 (42%), Gaps = 42/407 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +    + E+P G  D    E   +  +   I +I+  +G+  + TP  EY D L   +
Sbjct: 2   MSRS--FKTEIPSGVRDLMPGEAWCKRELEREISDIFRAWGYQEVVTPAFEYFDVL--KI 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D     ++   D  G+ ++LR D+T P+AR  A       FP R + I  VF  E+ 
Sbjct: 58  GQRDEQLDLMYKFIDRQGRILALRPDMTTPIARLTASRQKRGPFPLRLFYIANVFSYEEP 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R++ Q  V+ +GSS   ADAE+  +  + L+ +G++  ++ + +    I +G++E
Sbjct: 118 QAGRQREYYQAGVELIGSSNPEADAEVLALTVEVLKKIGLQ--NFKLSVGQIDIFNGLME 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++ +  + K                   + +K  +         +      L  ++ID +
Sbjct: 176 ELEVAEEVK-------------------KEIKTTISNQNFVGVEEMLHNQKLPEKEIDKV 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  +++   +   E    +  +    K  + L  +  ++         + +   ++R  +
Sbjct: 217 MQIITLRGSRRELESIRPMLTSAKALKALDNLEEVFAVLTDY-RLDRYVDLDLGLLRDFD 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E               +   + GGGRYDGL+ +F     PATGF++GI R+++
Sbjct: 276 YYTGLVFE----------GSALGLGFPICGGGRYDGLLGQFG-LPCPATGFALGIERIML 324

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           AL+               L   +++++    +       LR  G R 
Sbjct: 325 ALERQG-----HSRDFKNLDYIIEYENHRRLEAFDKAAQLRAEGHRV 366


>gi|74315237|gb|ABA02301.1| HisRS [Lactobacillus sakei]
 gi|74315242|gb|ABA02305.1| HisRS [Tetragenococcus muriaticus]
          Length = 296

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/332 (20%), Positives = 125/332 (37%), Gaps = 45/332 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + P+G  D    EI +  ++    R+ +  +G+  I TP+ E  +   + + D  D   
Sbjct: 6   YQRPKGTVDILPGEIEVWQKVEKIARDTFNQFGYRGIRTPIFENYNVFARNVGDTSDIVE 65

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGR 124
           K ++   D  G+ ++LR + TA   R   EN         P + Y +GP+FR E+   GR
Sbjct: 66  KQMYDFDDKGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFRYERPQSGR 125

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q   + + S +   D E+        + +GI      +     K       K  +
Sbjct: 126 QRQFTQIGCEALNSESPQIDVEVISEALQFFKQLGINDLKLTVNTLGDKETRDAYHKALI 185

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                  ++L    + D  ++     +++L  +  TD                  ++  L
Sbjct: 186 DYLKPYYDQL----SDDSKERMYKNPLRVLDSKDETDQK---------IVANAPSILDSL 232

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S    K   E+ +L+       +  +++                       VRGL+YYT 
Sbjct: 233 SDYSAKYFEEVKKLLDKLNIKYEIDSDM-----------------------VRGLDYYTQ 269

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
            ++E +    V         + +V GGGRY+G
Sbjct: 270 TIFEIMSASDVFG-----GGYVTVCGGGRYNG 296


>gi|71893590|ref|YP_279036.1| histidyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|83305871|sp|Q4AA96|SYH_MYCHJ RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71851717|gb|AAZ44325.1| histidyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 428

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 84/457 (18%), Positives = 173/457 (37%), Gaps = 56/457 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK  L    P+G  D   +  +I   +     N  + + F  IETP+ EY++      
Sbjct: 1   MKKKLNL---CPKGTYDFFGQGAKIFIDVRKVFFNQAKKFNFSYIETPIFEYANIFLTTN 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D  +K ++   D  G+ ++LR + TAP+ R VA++        + +  GP+FR E  
Sbjct: 58  QIADIVSKELYKFFDKSGRELALRPEGTAPIMRSVAQHKLFQTEK-KFFYFGPMFRYENP 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---DTLEAVGIKRNDYHIGINNRKILDG 177
             GRFRQF Q   + +    ++ + ++  ++       + +GI   +  I   +      
Sbjct: 117 QKGRFRQFYQAGFEIINYKKDSLEFQILEIILLIKSIFKDLGINEYELKINFLSNLTTRN 176

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I EK      +K +++L  +       +     +++L  +   +             +  
Sbjct: 177 IYEKNLAQYFEKFSDKLEPIS----KIRIKKNPLRILDDKIEQEKEF---------VKLA 223

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             + +F +++ +   + +  +++                             K+   +VR
Sbjct: 224 PKINTFWTMEDKNIFNRITSILEEF-----------------------KISYKVDYNLVR 260

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E I     +  K       ++ GGG Y+ L ++F   N  + G + GI R
Sbjct: 261 GLDYYDDFVFEFIDTSQTLGTK------LALVGGGCYNNLPTKFGLNNFKSIGMAFGIER 314

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           LI  LKS ++      +        +      +       ++LR      ++   +  + 
Sbjct: 315 LIEILKSKKNIKEQNLD-----FFLLSFTDKEILLNFKLAKILRKENFLVDLN-KTPFSV 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
               + A +             +++  + +K+L  GK
Sbjct: 369 SKGFQLAKKSGAKFVFFF-EKNQAKNYISLKNLQTGK 404


>gi|74315232|gb|ABA02297.1| HisRS [Oenococcus oeni]
          Length = 296

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/332 (20%), Positives = 125/332 (37%), Gaps = 45/332 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + P+G  D    EI +  ++    R+ +  +G+  I TP+ E  +   + + D  D   
Sbjct: 6   YQRPKGTVDILPGEIEVWQKVEKIARDTFNQFGYRGIRTPIFENYNVFARNVGDTSDIVE 65

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGR 124
           K ++   D  G+ ++LR + TA   R   EN         P + Y +GP+FR E+   GR
Sbjct: 66  KQMYDFDDKGGRRLALRPEGTAGTVRAYVENKLFGPGYPKPYKVYYMGPMFRYERPQSGR 125

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q   + + S +   D E+        + +GI      +     K       K  +
Sbjct: 126 QRQFTQIGCEALNSESPQIDVEVISEALQFFKQLGINDLKLTVNTLGDKETRDAYHKALI 185

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                  ++L    + D  ++     +++L  +  TD                  ++  L
Sbjct: 186 DYLKPYYDQL----SDDSKERMYKNPLRVLDSKDETDQK---------IVANAPSILDSL 232

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S    K   E+ +L+       +  +++                       VRGL+YYT 
Sbjct: 233 SDYSAKYFEEVKKLLDKLNIKYEIDSDM-----------------------VRGLDYYTQ 269

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
            ++E +    V         + +V GGGRY+G
Sbjct: 270 TIFEIMSDSDVFG-----GGYVTVCGGGRYNG 296


>gi|320093770|ref|ZP_08025617.1| histidine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979271|gb|EFW10767.1| histidine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 447

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 123/482 (25%), Positives = 205/482 (42%), Gaps = 57/482 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +       +   +LD++R ++E +GF  IET  +E  + L          +K ++ 
Sbjct: 7   SGFPEWLPDGRVVEQYVLDALRRVFELHGFCGIETRAVETLEQLEAKGE----TSKEIYV 62

Query: 73  L-------QDDDG------QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           L        +  G      + + L +DLT P ARYV EN + + FP + Y+I  V+R E+
Sbjct: 63  LDRLQALKAEQGGRRPGKERRMGLHFDLTVPFARYVVENANELDFPFKRYQIQKVWRGER 122

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GRFR+F Q D+D VG+       E+ + +        +      + +NNRK++ G  
Sbjct: 123 PQEGRFREFTQADIDVVGNGQLPFHFEVDLPLVMAEALNSLPIPPVRVLVNNRKVVQGAC 182

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E +G+   D        LR +DKLDK G +GV   L              + + + Q   
Sbjct: 183 ECLGVGDVDAA------LRGLDKLDKIGAEGVAGELA------------ASGIGAAQARA 224

Query: 240 MVS---FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           ++      S    +    + EL       E+G  EL  + +           +     I 
Sbjct: 225 LLEMARIRSASSSEVRSRVAELGLSGPLLEEGLGELCALLD--AAGSRMPGALVADLRIA 282

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RGL+YYTG VYE        +E +     GS+  GGRYD L S  K ++ P  G SIG+S
Sbjct: 283 RGLDYYTGSVYE--------SEVEGHEDLGSICSGGRYDSLASDSK-RSYPGVGLSIGVS 333

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           RL+  +  + +         P  +       +   + +   + LR  GI  ++   ++K 
Sbjct: 334 RLVSRM--ISAPLVRATRPVPTAVVVAVASEEERERSEAVARALRARGIPTDVAPSAAK- 390

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           FG Q+K+ADRR  P     G+     G   +KD+  G+++  +        +     + +
Sbjct: 391 FGKQIKFADRRAIPFVWFPGSD----GADTVKDIRSGEQVEADSATWAPPAQDLAPGV-V 445

Query: 477 PI 478
           P+
Sbjct: 446 PV 447


>gi|269977309|ref|ZP_06184282.1| histidyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269934612|gb|EEZ91173.1| histidyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 437

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 110/470 (23%), Positives = 192/470 (40%), Gaps = 51/470 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +   +E  + + +L +++ ++E +GF  +ET  +E    L K        ++ V++
Sbjct: 6   SGFPEFTPEEKILEDSLLATLQRVFELHGFSHLETRAVEPLSVLEKKGE----TSQEVYT 61

Query: 73  ---LQDDDGQW---ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              LQD D        L +DLT PL+RYV EN   + FP   Y+I  V+R E+   GRFR
Sbjct: 62  LSRLQDKDSHEPVKNGLHFDLTVPLSRYVLENAHLLQFPFMRYQIQKVWRGERPQEGRFR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+Q D+D +         E+   +        +      + +N+RKIL G    +G+  
Sbjct: 122 EFVQADIDMIARDTLPVHFEIEAPLIMAEALEALPIPQPVVHVNSRKILQGACNALGISE 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--L 244
            D + +                  V     +   +          L   Q+  +     +
Sbjct: 182 VDAVLQ------------------VIDKHDKVTPEVFSQMLLELQLDDAQVKTIWDLAGI 223

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S +  +    + +L       E+G +++  +    R  G     +     I RGL+YYTG
Sbjct: 224 SGNEPEVASRVRDLGLKDDLLEEGLDDVARMLVAARARGR--ENVVADFKIARGLDYYTG 281

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            VYE  +    M        +GS+  GGRYD LVS  K +  P  G SIG++RLI  + +
Sbjct: 282 MVYETFITGAEM--------YGSICSGGRYDNLVSEGKRR-FPGVGMSIGLTRLISIILA 332

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  +    P  +  +    ++  +       LR  G+  E+   ++K +G Q+KYA
Sbjct: 333 NN--WVEVSRSVPTAVLVLVDSEETRGESDQVAATLRQRGVCTEVSPTAAK-YGKQIKYA 389

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             R  P        E       +K++  G++   + +  E   +    Q+
Sbjct: 390 ANRGIPYVWFVSQRE-------VKNILTGEQAVADPQTFEFETQLLKPQV 432


>gi|223940630|ref|ZP_03632473.1| histidyl-tRNA synthetase [bacterium Ellin514]
 gi|223890711|gb|EEF57229.1| histidyl-tRNA synthetase [bacterium Ellin514]
          Length = 417

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 105/461 (22%), Positives = 168/461 (36%), Gaps = 73/461 (15%)

Query: 10  ELPRGFADCPTK--------EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            LP GF D   +            RN I D  R++   YGF   + P LE  +       
Sbjct: 3   RLP-GFRDFYPEPLPHPDVWSADARNYIFDKWRSMARRYGFREYDGPPLESLELYTTKSG 61

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           DE      +++  D   + +++R ++T  LAR VA +      P + + +  +FR E+  
Sbjct: 62  DEIV--AQLYNFTDKGQREVAMRPEMTPTLARMVAAHERNYKKPIKWFALPQLFRYERQQ 119

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR R+  Q + D  G S   AD+E+  ++ DTL + G+   D+ I +++R        +
Sbjct: 120 KGRLREHFQFNADVFGESDVAADSELISLLIDTLRSFGLTAEDFVIRLSSRNAWHDYFNQ 179

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                           R  D+   +    +   L   + + S         + E+I    
Sbjct: 180 ----------------RCTDESKAYEFYQIIDKLEREQPEQSKTKLSALGFSFEEIQ--- 220

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                                I   +   EL  I + +   G   + +K+   ++RGL Y
Sbjct: 221 -------------------SFIHTGQPTAELDAILKNLAARGLG-DFVKVDYQVIRGLAY 260

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK--GQNVPATGFSIGISRLI 359
           YTG V+EA           K   F ++ GGGRYD LV        N+PA GF +G   L+
Sbjct: 261 YTGVVFEAF---------DKKGEFRAIAGGGRYDNLVKLISGGKVNLPALGFGMGDVVLL 311

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             LK+          +    +     D           Q LR+AG   +  L  +K    
Sbjct: 312 ELLKARGLLPKFESGIDLFCLI---EDETLRPDSLKLIQDLRSAGFAVDYSLTPAK-PDK 367

Query: 420 QLKYADRRNCPLAIIQGTG----ERSRGMLQIKDLAKGKEL 456
           Q K A        I         E    M + K+L   +E 
Sbjct: 368 QFKRAQEIKAAFTIKV-ERTPSGEL---MARAKNLQSREEK 404


>gi|146305013|ref|YP_001192329.1| histidyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|172046974|sp|A4YJ03|SYH_METS5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|145703263|gb|ABP96405.1| histidyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 430

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 110/453 (24%), Positives = 193/453 (42%), Gaps = 41/453 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG  D    + +I   I  + R   E  G+    TP++E  +       +E R    ++ 
Sbjct: 8   RGMEDYFDVDSKIIRWIESNFRETVEKAGYKEAMTPIVEDFELFSLKGGEELRNT--MYV 65

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +D   + ++LR ++T  + R    +      P R + IG V+R ++   GR+R+F Q  
Sbjct: 66  FKDKGEREVALRPEITPSIVRLYLNSLQHYPKPLRIFYIGRVYRYDEPQQGRYREFRQAG 125

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           V+ +GS +  AD E+  ++ +    + +K +   + INN  I   I  K+    D+++ E
Sbjct: 126 VELLGSDSILADIEVLHLLENFYRRINLK-DKISLKINNIGIFRIIFNKL--SFDEQVQE 182

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L+ L     LDK  ++  + +L E   DNS        L       + +  S+ LE++M
Sbjct: 183 HLLHL-----LDKGKIEEAEKILDEKIRDNSKIRQFIYTL-------ITNGRSLKLEEAM 230

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            E  +     +  E     L +ISE++     +     +    VRGL YYTG ++E +  
Sbjct: 231 REAEKTELSELVNE--IENLKLISEILSSLNLDHI---VDLGFVRGLAYYTGPIFEVVKR 285

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
               +          + GGGRYD LV  + G   PA GF+IGI R + AL       ++ 
Sbjct: 286 DLPFS----------IAGGGRYDSLVEVYGGNRTPAVGFAIGIERTMYALNKDGIKFDSN 335

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ--LKYADRRNCP 430
                 L+  +  D   +        MLR  G    +             L YA+ +   
Sbjct: 336 AP----LVAVVALDRSVIPHALSIVSMLRDKGFITVLNNKEIP-LSKLVPL-YAE-QGFT 388

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             II G  E + G + +++L K ++++ ++K  
Sbjct: 389 HLIIMGQKEITSGKVTVRNLVKREQITTDVKEL 421


>gi|218679361|ref|ZP_03527258.1| histidyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 220

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 142/211 (67%), Positives = 164/211 (77%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +IR  N +   IR +YE+YGFDP+ETPL EY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGFVDRTAGDIRAVNGMTAKIREVYEHYGFDPVETPLFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQDDD QW+SLRYDLTAPLAR+VAE F+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAETFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           PGRFRQF+Q D D VG+    ADAEMCMMMADTLEA+GIKR DY I +NNRK+LDG+L+ 
Sbjct: 126 PGRFRQFMQFDADTVGAPGVQADAEMCMMMADTLEALGIKRGDYVIRVNNRKVLDGVLDA 185

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           IGL GDDK  +RL VLRAIDKLD   L+  +
Sbjct: 186 IGLGGDDKAGQRLNVLRAIDKLDSSALRAWR 216


>gi|322421281|ref|YP_004200504.1| histidyl-tRNA synthetase 2 [Geobacter sp. M18]
 gi|320127668|gb|ADW15228.1| histidyl-tRNA synthetase 2 [Geobacter sp. M18]
          Length = 440

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 97/485 (20%), Positives = 179/485 (36%), Gaps = 60/485 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     + A LP+G +D   +       I DSI  ++E +GF  + TPLLE+ D L   L
Sbjct: 1   MTNPACIEAPLPKGVSDFLPETADKITFIADSIHRVFELWGFRRMITPLLEFEDVLA--L 58

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              D      F   D   G+ +++  D+T  +AR VA     +  P R Y  G V R  +
Sbjct: 59  GMGDELRSKTFRFDDRQTGRLLAIPPDITPQVARIVATRMHALPLPHRIYYSGRVLRQAQ 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR R+  Q  V+ +G  +  ADAEM  M  + L+ +G     + I +   +   GI+
Sbjct: 119 MQSGRSREIFQSGVELIGLDSPEADAEMVAMAVEVLKNLGFTG--FKIDLGQVEFYRGIM 176

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +  GL  D +                     ++  + +          + A       + 
Sbjct: 177 DASGLSLDVQRQ-------------------LQEAISKKEVSAVRSILEAAGAPDRVKEE 217

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +     +   + + +    + G     +  + L  + E++   G     + I    +RGL
Sbjct: 218 IALLPRLYGGREVLQEAARIAGNERSLRALDNLTQVVEILDIYGVAE-HLTIDLGEIRGL 276

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +Y+TG  +E  +          P V  ++  GGRYD L  ++          + G +  I
Sbjct: 277 DYHTGITFEGFV----------PGVGEAICSGGRYDDLTGKYGYPAH-----ATGFAFNI 321

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +AL +  +    ++          +   +   +     Q LR+ G      +   ++F +
Sbjct: 322 LALLASMAKRPEVEASSSRDFLIFNKKDERR-EALEVAQKLRSLGFTCARDII-KRDFDS 379

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
            L+YA + +  L ++ G    +   L +            + +           IT+   
Sbjct: 380 SLEYAKKMDIRLLLVIGAEGCAADQLYL----------VRVADR--------RGITVSKE 421

Query: 480 ELVST 484
           EL   
Sbjct: 422 ELFDK 426


>gi|269795067|ref|YP_003314522.1| histidyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269097252|gb|ACZ21688.1| histidyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 466

 Score =  168 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 136/492 (27%), Positives = 201/492 (40%), Gaps = 69/492 (14%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R     GF +       +   +LDS+R  +E +GF  IET  +E  D L +        +
Sbjct: 3   RPTPLSGFPEWLPAARIVEQHVLDSVRRTFELHGFVGIETRAVEPLDQLLRKGE----TS 58

Query: 68  KGVFSLQ-----------------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
           K V+ L                  D  G  + L +DLT P ARYV EN   + FP + Y+
Sbjct: 59  KEVYVLNRLQATEDEKAEANLSAADKQG--LGLHFDLTVPFARYVLENAGHLAFPFKRYQ 116

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM--MADTLEAVGIK-RNDYHI 167
           I  V+R E+   GRFR+F+Q D+D VG+ +     E+ +   MA+ L A+         I
Sbjct: 117 IQKVWRGERPQDGRFREFVQADIDVVGAGSLPYHFEVEVPLVMAEALGALRSVGVPPVKI 176

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +NNRK+ +G    +GL   D       VL+ IDKLDK G + V           +    
Sbjct: 177 LVNNRKVAEGFYRGLGLEAVD------GVLQVIDKLDKIGPEKV-----------AAALV 219

Query: 228 KGANLTSEQIDIMVSFLSIDLEK--SMHELYELVKGTIAGEKGFNELVVISELV--RKSG 283
                T EQ +  +   SI  E    +  +  L           +E +     +    + 
Sbjct: 220 ADLGATQEQAEACLELASISGEDLTVVDRVRALATTHGIESDLLDEGLAELGALVEAAAV 279

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
                +     I RGL+YYTG VYE +L              GS+  GGRYD L S    
Sbjct: 280 RAPGVVVADLKIARGLDYYTGSVYETVLVG--------HEELGSICSGGRYDTLASDGAN 331

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
              P  G SIGISRL+  L        +      V++     ++   S+       LR  
Sbjct: 332 T-YPGVGLSIGISRLVSRLVGKGLVQASRSVPSAVVVAVTSDETRPASEAVAVA--LRAR 388

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAII---QGTGERSRGM---LQIKDLAKGKELS 457
           GI  E+   ++K FG Q++YADRR  P        G    + G     Q+KD+  G+++ 
Sbjct: 389 GIPVEVAPSAAK-FGKQIRYADRRGVPFVWFPAGLG----ADGEPVPHQVKDIRSGEQVE 443

Query: 458 REIKNNESWREA 469
            +    E   + 
Sbjct: 444 ADPATWEPGADD 455


>gi|261337920|ref|ZP_05965804.1| histidine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277406|gb|EFA23260.1| histidine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 455

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 127/478 (26%), Positives = 207/478 (43%), Gaps = 53/478 (11%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDDGQW-- 80
             R++D++R+I+E  GF  IET  +E   SL K        +K ++    LQD   +   
Sbjct: 2   EQRVIDTLRHIFELNGFIGIETRAVEQGSSLLKKGE----TSKEIYLLSRLQDVGNEQDT 57

Query: 81  -----ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
                + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D 
Sbjct: 58  PVEDRLGLHFDLTVPLSRYVVEHSGQLAFPFKRWQIQKVWRGERPQEGRFREFVQADIDV 117

Query: 136 VGSS--AETADAEMCMMMADTLEAVGIKR-NDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           VG+    E  + ++ ++M   LE +         +  NNRK+ +G    +GL   +    
Sbjct: 118 VGNGDLPEHYEVDLPLVMVSALEELRSFGLPKATVHANNRKLSEGFYRGLGLTDIE---- 173

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRT---DNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
              VLR IDKLDK G   VK LL        D +    + A+LT+     +    +   E
Sbjct: 174 --GVLREIDKLDKIGADEVKKLLISECGANDDQADACLELADLTAANGTDLTERFNALCE 231

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +H + E  +     ++G + L  I +  + +      +     I RGL+YYTG VYE 
Sbjct: 232 --LHHVDENPEAYALAKQGLDTLANIID--QAARIRPGSVVADLKIARGLDYYTGSVYET 287

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            L              GS+  GGRYD L S+   +  P  G SIG+SRL+  +     + 
Sbjct: 288 FL--------DGAQSLGSICSGGRYDNLASQGS-KKYPGVGLSIGLSRLVSYMLHTAHAE 338

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   V++   + +  ++S      + LR  GI  ++   ++K  G Q+KYAD+   
Sbjct: 339 ATRVSPAVVMVAVWNENDRAISD--DIARRLRERGIPTDVAPTAAK-LGKQIKYADKLGI 395

Query: 430 PLAIIQGTG-ERS-------RGMLQ---IKDLAKGKELSREIKNNESWREARVAQITI 476
           P         E                 +K++  G +   +    E         +T+
Sbjct: 396 PYVWFPADAMEVQAAPDGTPADQATHNEVKNIVTGDQQPADPDTWEPDVAIAAQSVTV 453


>gi|284931195|gb|ADC31133.1| Histidyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 419

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 93/465 (20%), Positives = 172/465 (36%), Gaps = 50/465 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K        RG  D   + + + N I   I  + + Y +  I+TP+ E+++   + L
Sbjct: 1   MSNKQ---ITAVRGTTDWFDQAMILFNAISHKIIALSDLYTYQRIKTPVFEHAELFSRNL 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNE 118
              D   K ++ L D   + ++LR + TA + R V E+       +P + Y + P+FR E
Sbjct: 58  EHSDIVKKELYQLIDRSERKLALRPEGTASIIRAVNEHKLLDQNPWPLKLYYLEPMFRYE 117

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   GR R+F Q  ++ VG   +    +  +     L+            + N       
Sbjct: 118 RPQKGRMREFYQYGIELVGELDQLDYLQTILFAKKILDIFNFDCVLNINWLGNFASRKRW 177

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           +E++  +               D+L +  +  +         D+  +  K    ++  ID
Sbjct: 178 VEQLNQYFKQ----------YQDQLSELSVSRLDSYGVLRILDDKNESKKDFVRSAPTID 227

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             +S                            E     +L+ +      +   +S++VRG
Sbjct: 228 QFISL--------------------------EEQTQFKQLLEQLDQLGIKYVYNSSLVRG 261

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY+  V+E IL               ++ GGG Y  L++    + + A GF++ I R 
Sbjct: 262 LDYYSELVFEFILAN-------NDQAQSTLIGGGCYQNLIAELTNKPLKAIGFALSIERF 314

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I  L      +   ++  P  +      +  L+     +Q L     +       +K   
Sbjct: 315 ISYLDDKTKDSLINQDQKPRYLLINLVPNKELAT-LNLSQELINHNYQVYYQHKLNK-VD 372

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             +KYA R      II G  E S+  + IKDLA   + + + K  
Sbjct: 373 KAIKYALRAKFTHLIIMGNDEWSKQTMTIKDLASQTQQTIKYKEF 417


>gi|72080581|ref|YP_287639.1| histidyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|83305870|sp|Q4A8C3|SYH_MYCH7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71913705|gb|AAZ53616.1| histidyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 428

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 82/457 (17%), Positives = 173/457 (37%), Gaps = 56/457 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK  L    P+G  D   +  +I   +     +  + + F  IETP+ EY++      
Sbjct: 1   MKKKLNL---CPKGTYDFFGQSAKIFIDVRKVFFDQAKKFNFSYIETPIFEYANIFLTTN 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D  +K ++   D  G+ ++LR + TAP+ R VA++        + +  GP+FR E  
Sbjct: 58  QIADIVSKELYKFFDKSGRELALRPEGTAPIMRSVAQHKLFQTEK-KFFYFGPMFRYENP 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---DTLEAVGIKRNDYHIGINNRKILDG 177
             GRFRQF Q   + +    ++ + ++  ++       + +GI   +  I   +      
Sbjct: 117 QKGRFRQFYQAGFEIINYKKDSLEFQILEIIVLIKSIFKDLGINEYELKINFLSNLTTRN 176

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I EK      +K +++L  +       +     +++L  +   +             +  
Sbjct: 177 IYEKNLAQYFEKFSDKLEPIS----KIRIKKNPLRILDDKIEQEKEF---------VKLA 223

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             + +F +++ +   + +  +++                             K+   +VR
Sbjct: 224 PKINTFWTMEDKNIFNRITSILEEF-----------------------KISYKVDYNLVR 260

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E I     +  K       ++ GGG Y+ L ++F   N  + G + GI R
Sbjct: 261 GLDYYDDFVFEFIDTSQTLGTK------LALVGGGCYNNLPTKFGLNNFKSIGMAFGIER 314

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           LI  +KS ++      +        +      +       ++LR      ++   +  + 
Sbjct: 315 LIEIIKSKKNIKEQNLD-----FFLLSFTDKEILLNFKLAKILRKENFLVDLN-KTPFSV 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
               + A +             +++  + +K+L  GK
Sbjct: 369 SKGFQLAKKSGAKFVFFF-EKNQAKNYISLKNLQTGK 404


>gi|13507784|ref|NP_109733.1| histidyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2500999|sp|P75069|SYH_MYCPN RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|1673766|gb|AAB95757.1| histidyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|301633675|gb|ADK87229.1| histidine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 414

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 91/473 (19%), Positives = 176/473 (37%), Gaps = 70/473 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + PRG  D   +E+   N  +  I N+   +GF  ++TPLLEY+++  +   + D   K
Sbjct: 4   LQKPRGVKDWYGEELIYFNWTVHQITNLAWKWGFSEVKTPLLEYAEAFKRTNANADIVKK 63

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGRFR 126
            ++   D   + ++LR + TA + R V EN            + IG ++R E+    R+R
Sbjct: 64  ELYEFHDKSNRLLALRPEATAGIVRLVCENKLLQPQNYPLRLFTIGTMYRYERPQSNRYR 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK----RNDYHIGINNRKILDGILEKI 182
           +  Q   + +G +  T   +  ++    ++ +GI+    + +        +  +  L+  
Sbjct: 124 EHYQFSCEVIGDTNPTVLLDTLLLGHAIIQQLGIEGVILKLNNLGNSATIQQWNQALQAY 183

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                 +L E            +     +++L  + + D    F   A         +  
Sbjct: 184 LTQFKAQLTELS--------QSRLSTNPLRIL--DDKVDGQLPFISDA-------PQIEQ 226

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           FL  + +                        + + L ++        + + T+VRGL+YY
Sbjct: 227 FLDAEQQ-----------------------ALNTWLQQQLTQQQVPFEWNPTLVRGLDYY 263

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG V+E +                +V  GG YD LV    G    A GF+ GI R I  L
Sbjct: 264 TGVVFEFVKDD------------TTVLAGGVYDNLVEELGGTPTKALGFACGIERSINCL 311

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML-RTAGIRAEMFLGSSKNFGNQL 421
            +++       +     +  +     +L K    +  L   A     ++    +   N +
Sbjct: 312 SAVKKQAILANQPP--RLLVIGLTEAALEKLLQLS--LGWRAYHPVTIYPKVIRII-NGI 366

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + A R       + G     +  + +KDLA  ++ +       +W E R  Q+
Sbjct: 367 RAAQRLGYRFLGVIGGNNLEQQTITVKDLATEQQTT------YTWDEFRQRQV 413


>gi|320457689|dbj|BAJ68310.1| histidyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 447

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 124/477 (25%), Positives = 198/477 (41%), Gaps = 59/477 (12%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDD----- 77
             R++D++R ++E  GF  IET  +E   SL K        +K ++    LQ+       
Sbjct: 2   EQRVIDTLRKVFELNGFIGIETRAVETGASLLKKGE----TSKEIYLLSRLQEVGHESDT 57

Query: 78  --GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
              + + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D 
Sbjct: 58  PIEERLGLHFDLTVPLSRYVVEHSGALAFPFKRWQIQKVWRGERPQEGRFREFVQADIDV 117

Query: 136 V--GSSAETADAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  G   +  + E+ ++M   LE +         +  NNRK+ +G    +GL   +    
Sbjct: 118 IGAGDLPDHYEVELPLVMVSALEELRAYGLPKATVHANNRKLSEGFYRGLGLTDVE---- 173

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKS 251
              VLR IDKLDK G   V  LL E              L               D    
Sbjct: 174 --GVLREIDKLDKIGADEVARLLTETCGATEAQARACLELAELTASDGAELAAKFDALCE 231

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            H + +  +      +G + L +I +    +      +     I RGL+YYTG VYE  L
Sbjct: 232 SHGIAKDSEAYTLARQGLDTLAMIVD--EAAAIRPGSVIADLKIARGLDYYTGSVYETFL 289

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                         GS+  GGRYD L S+   +  P  G SIG+SRL+  +     +  N
Sbjct: 290 DGAA--------SLGSICSGGRYDNLASQ-GNRKYPGVGLSIGLSRLVSYMLHAAGAHAN 340

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 VL+   + +             LR  GI  ++   ++K  G Q+KYAD+   P 
Sbjct: 341 RVSPAAVLVAVWNEED--RPAANRIANQLRARGIATDVAPTAAK-LGKQIKYADKLGIPY 397

Query: 432 AII------------QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                              E       +K++  G++++ +  + E   +  VAQ T+
Sbjct: 398 VWFPATAAEGAEGAEPAGDE-------VKNIVTGEQVAADCTSWEP--DTVVAQQTV 445


>gi|74315247|gb|ABA02309.1| HisRS [Lactobacillus buchneri]
          Length = 296

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 69/332 (20%), Positives = 123/332 (37%), Gaps = 45/332 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            + P+G  D    EI +  ++    R+ +  +G+  I TP+ E  +   + + D  D   
Sbjct: 6   YQRPKGTVDILPGEIEVWQKVEKIARDTFNQFGYRGIRTPIFENYNVFARNVGDTSDIVE 65

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPGR 124
           K ++   D  G+ ++LR + TA   R   EN         P + Y +GP+FR E+   GR
Sbjct: 66  KQMYDFDDKGGRRLALRPEGTAGTVRAYVENKLFGPEYPKPYKVYYMGPMFRYERPQSGR 125

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            RQF Q   + + S +   D E+     +  + +GI      I     K       K  +
Sbjct: 126 QRQFTQIGCEALNSESPQIDVEVISEALEFFKRLGINDLKLTINTLGDKETRDAYHKALI 185

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                   +L    + D  ++     +++L  +   D                  ++  L
Sbjct: 186 DYLKPFYNQL----SDDSKERMYKNPLRVLDSKDEQDKK---------IVANAPSILDSL 232

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S    K   E+  L+       +  +++                       VRGL+YYT 
Sbjct: 233 SDYSAKYFAEVKRLLDKLNIQYEIDSDM-----------------------VRGLDYYTQ 269

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
            ++E +    V         + +V GGGRY+G
Sbjct: 270 TIFEIMSDSDVFG-----GGYVTVCGGGRYNG 296


>gi|52219026|ref|NP_001004586.1| histidyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|51858513|gb|AAH81624.1| Histidyl-tRNA synthetase [Danio rerio]
          Length = 437

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 90/359 (25%), Positives = 159/359 (44%), Gaps = 34/359 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              +  +G  D   K++ IR ++ + I N ++ +G + I++P+ E  ++L     ++   
Sbjct: 61  FVLKTAKGTRDYNPKQMAIREKVFNIIINCFKRHGAETIDSPVFELKETLTGKYGED--- 117

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     GR+R
Sbjct: 118 SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPAMTRGRYR 176

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D  G          C+ +   + +  +   D+ I +N+R+ILDG+    G+  
Sbjct: 177 EFYQCDFDIAGQYDAMIPDAECLKLVYEILS-ELDLGDFRIKVNDRRILDGMFAICGVPD 235

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +    +   +   +DKLDK   + VK            +      L+ E  D +  ++S+
Sbjct: 236 E----KFRTICSTVDKLDKLAWEEVKK-----------EMVNEKGLSEEVADRIRDYVSM 280

Query: 247 DLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              K + E       +  +     G  ++ ++   +      ++++    ++ RGL+YYT
Sbjct: 281 QGGKDLAERLLQDPKLSQSKQACAGITDMKLLFSYLELFQI-TDKVVFDLSLARGLDYYT 339

Query: 304 GCVYEAIL----------GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
           G +YEAIL                 +   V  GSV GGGRYDGLV  F  +      + 
Sbjct: 340 GVIYEAILTQANPAPASTPAEQNGAEDAGVSVGSVAGGGRYDGLVGMFDPKAGKCPVWG 398


>gi|253699209|ref|YP_003020398.1| ATP phosphoribosyltransferase regulatory subunit [Geobacter sp.
           M21]
 gi|251774059|gb|ACT16640.1| histidyl-tRNA synthetase 2 [Geobacter sp. M21]
          Length = 440

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 94/485 (19%), Positives = 179/485 (36%), Gaps = 60/485 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M   + + A LP+G +D   +       I DSI  ++E +GF  + TPLLE+   L   L
Sbjct: 1   MTNPSCIEAPLPKGVSDFLPETADKITFIADSIHRVFELWGFRRMITPLLEFEHVLA--L 58

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              D      F   D   G+ +++  D+T  +AR VA     +  P R Y  G V R  +
Sbjct: 59  GMGDELRSKTFRFDDRQTGRLLAIPPDITPQVARIVATRMHALPLPHRIYYSGRVLRQAQ 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              G+ R+  Q  V+ +G  +  ADAEM  M  + L+ +G     + I +   +   GI+
Sbjct: 119 MQSGKSREIFQSGVELIGLDSPEADAEMVAMAVEVLKNLGFTG--FKIDLGQVEFYRGIM 176

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +  GL  + +                   + ++  + +          + A       + 
Sbjct: 177 DASGLSTEVR-------------------KQLQEAISKKEVSAVRSILESAGAPDRVKEE 217

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +     +   + + +    + G     +  + L  + +++   G     + I    +RGL
Sbjct: 218 IALLPRLYGGREVLQEARSIAGNERSLRALDNLAQVVDILDIYGVAE-HLTIDLGEIRGL 276

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +Y++G  +E  +          P V  ++  GGRYD L +++          +     ++
Sbjct: 277 DYHSGITFEGFV----------PGVGEAICSGGRYDDLTAKYGYPAH----ATGFAFNIL 322

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L S+          G   +   + D     +     Q LR+ G      +   ++F +
Sbjct: 323 ALLSSMSKRPEVEASSGRDFLIFNNKDE--RREALEVAQKLRSLGYTCARDII-KRDFDS 379

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
            L+YA + N  L ++ G    +   L +            + +  S        IT+   
Sbjct: 380 SLEYAKKMNIRLLLVIGAEGCAADQLYL----------VRVADRRS--------ITVSEE 421

Query: 480 ELVST 484
           EL   
Sbjct: 422 ELFDK 426


>gi|54020360|ref|YP_115652.1| histidyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|81680624|sp|Q601R3|SYH_MYCH2 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|53987533|gb|AAV27734.1| histidyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 428

 Score =  166 bits (420), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 82/457 (17%), Positives = 173/457 (37%), Gaps = 56/457 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK  L    P+G  D   +  +I   +     N  + + F  IETP+ EY++      
Sbjct: 1   MKKKLNL---CPKGTYDFFGQGAKIFIDVRKVFFNQAKKFNFSYIETPIFEYANIFLTTN 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D  +K ++   D  G+ ++LR + TAP+ R VA++        + +  GP+FR E  
Sbjct: 58  QIADIVSKELYKFFDKSGRELALRPEGTAPIMRSVAQHKLFQTEK-KFFYFGPMFRYENP 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---DTLEAVGIKRNDYHIGINNRKILDG 177
             GRFRQF Q   + +    ++ + ++  ++       + +GI   +  I   +      
Sbjct: 117 QKGRFRQFYQAGFEIINYKKDSLEFQILEIILLIKSIFKDLGINEYEIKINFLSNLTTRN 176

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I +K      +K +++L  +       +     +++L  +   +             +  
Sbjct: 177 IYKKNLAQYFEKFSDKLEPIS----KIRIKKNPLRILDDKIEQEKEF---------VKLA 223

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             + +F +++ +   + +  +++                             K+   +VR
Sbjct: 224 PKINTFWTMEDKNIFNRITSILEEFKII-----------------------YKVDYNLVR 260

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           GL+YY   V+E I     +  K       ++ GGG Y+ L ++F   N  + G + GI R
Sbjct: 261 GLDYYDDFVFEFIDTSQTLGTK------LALVGGGCYNNLPTKFGLNNFKSIGMAFGIER 314

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           LI  +KS ++      +        +      +       ++LR      ++   +  + 
Sbjct: 315 LIEIIKSKKNIKEQNLD-----FFLLSFTDKEILLNFKLAKILRKENFLVDLN-KTPFSV 368

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
               + A +             +++  + +K+L  GK
Sbjct: 369 SKGFQLAKKSGAKFVFFF-EKNQAKNYISLKNLQTGK 404


>gi|325068867|ref|ZP_08127540.1| histidyl-tRNA synthetase [Actinomyces oris K20]
          Length = 424

 Score =  166 bits (419), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 112/437 (25%), Positives = 177/437 (40%), Gaps = 39/437 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF +       +    +D +R  +E +GF  I+T  +E    L K        +K V+ 
Sbjct: 15  SGFPEWLPSGHIVEQHFVDILRRTFELHGFSGIQTRAVEPLSELTKKGE----TSKEVYL 70

Query: 73  L----QDDDG------QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           L     D         + + L +DLT P ARYV +N   + FP + Y+I  V+R E+   
Sbjct: 71  LSRLQADPAESEADPRKQLGLHFDLTVPFARYVVDNAGLLTFPFKRYQIQKVWRGERPQE 130

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GRFR+FIQ D+D VG  A     ++ + +        +      I ++NRK+  G  + I
Sbjct: 131 GRFREFIQADIDIVGDGALPLHHDVEVPLIMHEALSALPVPAVTIHVSNRKVAQGFYQSI 190

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           G+  D  +     VLR +DKLDK G + V   L +    ++          + Q   + +
Sbjct: 191 GIDTDRLI----EVLRVVDKLDKIGPEKVAAELTQSVGISAQQ--------AAQALRLAT 238

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG-YNSNRIKISSTIVRGLEY 301
               D +    ++   + G    E     L  ++ L+  +G      +     I RGL+Y
Sbjct: 239 ITGTDGQDVSDQVLRALAGAEPTELLNEGLAELTALLEATGRRRPGAVIADLKIARGLDY 298

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG VYE+ +              GSV  GGRYD L +  K       G  I I    + 
Sbjct: 299 YTGTVYESFMAG--------HEDLGSVCSGGRYDSLATNGKRTFP---GVGISIGLSRLL 347

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
            + +      +    P  +     D             LR  GI A++   ++K FG Q+
Sbjct: 348 ARVIGEGLVEVSRSVPTAVLVAVTDEAHRCASDAIADALRARGISADVAPSAAK-FGKQI 406

Query: 422 KYADRRNCPLAIIQGTG 438
           K AD+R+ P     G  
Sbjct: 407 KAADKRSIPFVWFPGAD 423


>gi|322691622|ref|YP_004221192.1| histidyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456478|dbj|BAJ67100.1| histidyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 447

 Score =  166 bits (419), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 123/477 (25%), Positives = 198/477 (41%), Gaps = 59/477 (12%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDD----- 77
             R++D++R ++E  GF  IET  +E   SL K        +K ++    LQ+       
Sbjct: 2   EQRVIDTLRKVFELNGFIGIETRAVETGASLLKKGE----TSKEIYLLSRLQEVGHESDT 57

Query: 78  --GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
              + + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D 
Sbjct: 58  PIEERLGLHFDLTVPLSRYVVEHSGALAFPFKRWQIQKVWRGERPQEGRFREFVQADIDV 117

Query: 136 V--GSSAETADAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  G   +  + E+ ++M   LE +         +  NNRK+ +G    +GL   +    
Sbjct: 118 IGAGDLPDHYEVELPLVMVSALEELRAYGLPKATVHANNRKLSEGFYRGLGLTDVE---- 173

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKS 251
              VLR IDKLDK G   V  LL E              L               D    
Sbjct: 174 --GVLREIDKLDKIGADEVARLLTETCGATEAQARACLELAELTASDGAELAAKFDALCE 231

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            H + +  +      +G + L +I +    +      +     I RGL+YYTG VYE  L
Sbjct: 232 AHGIAKDSESYTLARQGLDTLAMIVD--EAAAIRPGSVIADLKIARGLDYYTGSVYETFL 289

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                         GS+  GGRYD L S+   +  P  G SIG+SRL+  +     +  +
Sbjct: 290 DGAA--------SLGSICSGGRYDNLASQ-GNRKYPGVGLSIGLSRLVSYMLHTAGAHAS 340

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 VL+   + +             LR  GI  ++   ++K  G Q+KYAD+   P 
Sbjct: 341 RVSPAAVLVAVWNEED--RPAANRIANQLRARGIATDVAPTAAK-LGKQIKYADKLGIPY 397

Query: 432 AII------------QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                              E       +K++  G++++ +  + E   +  VAQ T+
Sbjct: 398 VWFPATAAEGAEGAEPAGDE-------VKNIVTGEQVAADCTSWEP--DTVVAQQTV 445


>gi|313113656|ref|ZP_07799237.1| histidyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624024|gb|EFQ07398.1| histidyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 458

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 119/449 (26%), Positives = 181/449 (40%), Gaps = 55/449 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ +  +G  D    E  +R+ I   I   Y   GF+ I TP+LE  ++L K     D  
Sbjct: 46  MKTQALKGMRDLLPAEQTLRDYIQGKILETYRASGFERISTPMLEDMENLDKSDG-GDNL 104

Query: 67  NKGVFSLQDDDGQ--------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           N  +F +     +               + LRYDLT PL+RY A N D +  P +  +  
Sbjct: 105 N-LIFKVLKRGDKLTAALNTGDPKQLSDMGLRYDLTLPLSRYYAANKDKLPSPFKVIQTD 163

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            VFR E+   GR R+F+QCD+D +G S+  A+ E+  +    L  +G     + + IN+R
Sbjct: 164 RVFRAERPQKGRLREFVQCDIDILGDSSPNAEVELIDVTTRALLNIGFTG--FTVNINDR 221

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           +IL G+LE +G   D        V    DK+DK G  GVK  L E +            L
Sbjct: 222 RILRGMLESMGFSADTL----DSVCITFDKMDKIGADGVKAELTEKQ------------L 265

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
               I+ +  F++   E ++  +              ++L  +            ++   
Sbjct: 266 PENAINALADFIAA-GEVTLDAVAARCADPAIA----DDLKYVLATANAMAAGRYQVAYC 320

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            ++VRG  YYTG V+E             P   G+V GGGRYD +V +F G  VPA GFS
Sbjct: 321 PSLVRGQGYYTGMVFEIT----------CPQFSGAVAGGGRYDNMVGKFLGTQVPAVGFS 370

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG  R+   L          K+     I  +       +        LR +     + L 
Sbjct: 371 IGFERVCGILLEQGYQIPGAKQ----KIALLYGKDADFTAVLAKAADLRNS-YNVTV-LQ 424

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +K  G QL   +      A      E  
Sbjct: 425 QAKKLGKQLGQLEASGFSGAAFMDKDEIK 453


>gi|227546744|ref|ZP_03976793.1| histidyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|227212706|gb|EEI80587.1| histidyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
          Length = 447

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 124/477 (25%), Positives = 198/477 (41%), Gaps = 59/477 (12%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDD----- 77
             R++D++R ++E  GF  IET  +E   SL K        +K ++    LQ+       
Sbjct: 2   EQRVIDTLRKVFELNGFIGIETRAVETGASLLKKGE----TSKEIYLLSRLQEVGHESDT 57

Query: 78  --GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
              + + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D 
Sbjct: 58  PIEERLGLHFDLTVPLSRYVVEHSGALAFPFKRWQIQKVWRGERPQEGRFREFVQADIDV 117

Query: 136 V--GSSAETADAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  G   +  + E+ ++M   LE +         +  NNRK+ +G    +GL   +    
Sbjct: 118 IGAGDLPDHYEVELPLVMVSALEELRAYGLPKATVHANNRKLSEGFYRGLGLTDVE---- 173

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKS 251
              VLR IDKLDK G   V  LL E              L               D    
Sbjct: 174 --GVLREIDKLDKIGADEVARLLTETCGATEAQARACLELAELTASDGAELAAKFDALCE 231

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            H + +  +      +G + L +I +    +      +     I RGL+YYTG VYE  L
Sbjct: 232 AHGIVKDSEAYTLARQGLDTLAMIVD--EAAAIRPGSVIADLKIARGLDYYTGSVYETFL 289

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                         GS+  GGRYD L S+   +  P  G SIG+SRL+  +     +  N
Sbjct: 290 DGAA--------SLGSICSGGRYDNLASQ-GNRKYPGVGLSIGLSRLVSYMLHTAGAHAN 340

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 VL+   + +             LR  GI  ++   ++K  G Q+KYAD+   P 
Sbjct: 341 RVSPAAVLVAVWNEED--RPAANRIANQLRARGIATDVAPTAAK-LGKQIKYADKLGIPY 397

Query: 432 AII------------QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                              E       +K++  G++++ +  + E   +  VAQ T+
Sbjct: 398 VWFPATAAEGAEGAEPAGDE-------VKNIVTGEQVAADCTSWEP--DTVVAQQTV 445


>gi|46190375|ref|ZP_00206444.1| COG0124: Histidyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189438880|ref|YP_001953961.1| histidyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189427315|gb|ACD97463.1| Histidyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 447

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 124/477 (25%), Positives = 198/477 (41%), Gaps = 59/477 (12%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDD----- 77
             R++D++R ++E  GF  IET  +E   SL K        +K ++    LQ+       
Sbjct: 2   EQRVIDTLRKVFELNGFIGIETRAVETGASLLKKGE----TSKEIYLLSRLQEVGHESDT 57

Query: 78  --GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
              + + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D 
Sbjct: 58  PIEERLGLHFDLTVPLSRYVVEHSGALAFPFKRWQIQKVWRGERPQEGRFREFVQADIDV 117

Query: 136 V--GSSAETADAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  G   +  + E+ ++M   LE +         +  NNRK+ +G    +GL   +    
Sbjct: 118 IGAGDLPDHYEVELPLVMVSALEELRAYGLPKATVHANNRKLSEGFYRGLGLTDVE---- 173

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKS 251
              VLR IDKLDK G   V  LL E              L               D    
Sbjct: 174 --GVLREIDKLDKIGADEVARLLTETCGATEAQARACLELAELNASDGAELAAKFDALCE 231

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            H + +  +      +G + L +I +    +      +     I RGL+YYTG VYE  L
Sbjct: 232 AHGIVKDSEAYTLARQGLDTLAMIVD--EAAAIRPGSVIADLKIARGLDYYTGSVYETFL 289

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                         GS+  GGRYD L S+   +  P  G SIG+SRL+  +     +  N
Sbjct: 290 DGAA--------SLGSICSGGRYDNLASQ-GNRKYPGVGLSIGLSRLVSYMLHTAGAHAN 340

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 VL+   + +             LR  GI  ++   ++K  G Q+KYAD+   P 
Sbjct: 341 RVSPAAVLVAVWNEED--RPAANRIANQLRARGIATDVAPTAAK-LGKQIKYADKLGIPY 397

Query: 432 AII------------QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                              E       +K++  G++++ +  + E   +  VAQ T+
Sbjct: 398 VWFPATAAEGAEGAEPAGDE-------VKNIVTGEQVAADCTSWEP--DTVVAQQTV 445


>gi|306823268|ref|ZP_07456644.1| histidine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|304553900|gb|EFM41811.1| histidine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
          Length = 444

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 125/467 (26%), Positives = 202/467 (43%), Gaps = 42/467 (8%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDD----- 77
             R++D++RN++E  GF  IET  +E   SL K        +K ++    LQ+       
Sbjct: 2   EQRVIDTLRNVFELNGFIGIETRAVEQGSSLLKKGE----TSKEIYLLSRLQEVGHESDT 57

Query: 78  --GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
                + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D 
Sbjct: 58  PIEDRLGLHFDLTVPLSRYVVEHSGDLAFPFKRWQIQKVWRGERPQEGRFREFVQADIDV 117

Query: 136 VGSS--AETADAEMCMMMADTLEAVGIKR-NDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +G+    +  + E+ ++M   LE +         +  NNRK+ +G    +GL   +    
Sbjct: 118 IGNGDLPDHYEVELPLVMVSALERLREFGLPKATVHANNRKLSEGFYRGLGLTDVE---- 173

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL-SIDLEKS 251
              VLR IDKLDK G   V  LL EG   N         L               D   +
Sbjct: 174 --GVLREIDKLDKIGADEVAKLLVEGCGANENQARACLELAELTAANGADLAEKFDALCA 231

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            H++       +   +G + L +I +    +      +     I RGL+YYTG VYE  L
Sbjct: 232 KHDIAADSDAYVLARQGLDTLAMIVD--EAARIRPGSVIADLKIARGLDYYTGSVYETFL 289

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                         GS+  GGRYD L S+   +  P  G SIG+SRL+  +     +  N
Sbjct: 290 DGAA--------SLGSICSGGRYDNLASQ-GNKKYPGVGLSIGLSRLVSYMLHAAGAHAN 340

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 VL+   +      S   +    LR  GI A++   ++K  G Q+KYAD+   P 
Sbjct: 341 RVSPASVLVAVWNEAD--RSASNVIANQLRARGIAADVAPTAAK-LGKQIKYADKLGIPY 397

Query: 432 AIIQGTGERSRGML--QIKDLAKGKELSREIKNNESWREARVAQITI 476
                  + +   +  ++K++  G +   + ++ E         +T+
Sbjct: 398 VWF--PSDAAEDGVGDEVKNIITGDQQPADARSWEPDTVYARQTVTV 442


>gi|257440351|ref|ZP_05616106.1| histidine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197197|gb|EEU95481.1| histidine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 426

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 118/454 (25%), Positives = 182/454 (40%), Gaps = 55/454 (12%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            ++  ++++  +G  D    E  +R+ I   I   Y   GF+ I TP+LE  ++L K   
Sbjct: 9   KEEPTMKSQALKGMRDLLPAEQTLRDYIQGKILETYRASGFERISTPMLEDMENLDKSDG 68

Query: 62  DEDRPNKGVFSLQDDDGQ--------------WISLRYDLTAPLARYVAENFDTIVFPCR 107
             D  N  +F +     +               + LRYDLT PL+R+ A N D +  P +
Sbjct: 69  -GDNLN-LIFKVMKRGDKLTSALGSGDPKQLSDMGLRYDLTLPLSRFYAANKDKLPHPFK 126

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
             +   VFR E+   GR R+F+QCD+D +G  +  A+ E+  + A  L  +G     + +
Sbjct: 127 VIQTDRVFRAERPQKGRLREFVQCDIDILGDESPNAEVELIDVTARALLGIGFTG--FTV 184

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            IN+R+IL G+LE +G   D        V    DK+DK G +GVK  L E +        
Sbjct: 185 NINDRRILHGMLESMGFAADTL----DSVCITFDKMDKIGAEGVKAELTEKQ-------- 232

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
               L    I+ +  F++           E V    A     ++L  +    +       
Sbjct: 233 ----LPEAAINALADFIAAG-----DVTLESVASRCADPAIADDLKYVLATAKAMANGRF 283

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
            +    ++VRG  YYTG V+E             P   G+V GGGRYD ++ +F G  VP
Sbjct: 284 DVAYCPSLVRGQGYYTGMVFEIT----------CPQFSGAVAGGGRYDNMIGKFLGTKVP 333

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           A GFSIG  R+   L          K+     I  + +              LR      
Sbjct: 334 AVGFSIGFERVCGILLEQGYQIPGAKQ----KIALLYNSDVDFPAVLAKAAQLRDT-YNV 388

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +    +K  G QL   +      A      E  
Sbjct: 389 TVLP-QAKKLGKQLGQLEASGFAGAAFMDKDEVK 421


>gi|326386590|ref|ZP_08208212.1| histidyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208905|gb|EGD59700.1| histidyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 419

 Score =  165 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 94/443 (21%), Positives = 161/443 (36%), Gaps = 70/443 (15%)

Query: 1   MGKK---TKLRAELP---RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD 54
           M K+      R E+P   RG  D    E      ++++   +  +Y F  +E P+ E + 
Sbjct: 1   MSKQAASDTTRPEIPQAIRGTQDIFGAEAEAFGFVVETFERVRRHYRFRRVEMPVFEKTQ 60

Query: 55  SLGKFLPDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
              + L +  D  +K ++S  D  G+ ++LR + TA LAR    +      P R    GP
Sbjct: 61  VFSRSLGETTDVVSKEMYSFDDRGGESLTLRPEFTAGLARAYLTDGWQQFAPVRLATHGP 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIG 168
           +FR E+   GR+RQF Q D + VG++   AD E+  M    L  +GI        +    
Sbjct: 121 IFRYERPQKGRYRQFHQIDAEIVGAADPLADIELLTMADQLLNELGIADGVTLHLNTLGD 180

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             +R+     L         +L+E        D  D+     +++L  +   D       
Sbjct: 181 AASREAWRAALIAYFRDHRAELSE--------DSQDRLERNPLRILDSKDPRDKPF---- 228

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
                +     +  FL+ + +     +   +                             
Sbjct: 229 -----TADAPRIDDFLTAEAQDFFGRVTSGLDAAGVA----------------------- 260

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
              S ++VRGL+YY    +E I          +    G+V GGGRYDGL+    G   PA
Sbjct: 261 WTRSPSLVRGLDYYRHTAFEFIT--------DRLGAQGTVLGGGRYDGLIEALGGPATPA 312

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G++ GI           +     K+     +     D  ++         LR AG  AE
Sbjct: 313 VGWAAGI--------ERLAMLVGTKDEPTADVVIAVEDDAAIETGIRALAALRRAGFSAE 364

Query: 409 MFLGSSKNFGNQLKYADRRNCPL 431
           +   ++ +   +   A +    +
Sbjct: 365 VV--ATGSPRKRYDKAAKIPAKV 385


>gi|292670900|ref|ZP_06604326.1| histidine--tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647521|gb|EFF65493.1| histidine--tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 393

 Score =  165 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 92/413 (22%), Positives = 173/413 (41%), Gaps = 42/413 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  KL  E P G  D   ++      + D +  ++ ++G+D + TP +E+ ++L   +
Sbjct: 1   MMKSEKLILETPYGTRDLLPRDAAEMRHMEDMLSRLFRSWGYDEVITPTIEHLETLVPRI 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           P+E+     +F L  +  + ++LR ++T P+AR V+        P +   +G VFR E+ 
Sbjct: 61  PEEN----SLFMLLGNKNKLLALRNEMTTPIARLVSSRLKDAPVPLKLSYLGNVFRVEQT 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +GS    +DAE+  +  +++   GIK  D+ I I     LDG+L 
Sbjct: 117 QMGRQCEFHQAGVELMGSETPASDAEIISLAIESVLTCGIK--DFQIHIGQVDFLDGMLA 174

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              + GD++  E    +   D +                            L++   + +
Sbjct: 175 YYEV-GDEQSKELKSAIECHDIVLM------------------NQLIDTLPLSARDKETL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +   ++  + + +               + L  I  L++  GY  + +      +R   
Sbjct: 216 KALPLLNGREDLLKRLYGFSLNTQSLSAVDNLAEIYALIKSYGY-KDYVCFDLGTIRDFN 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E               +   + GGGRYD L++ +    +PATGF++G+ R+++
Sbjct: 275 YYTGMVFEGY----------SIGLGFPLCGGGRYDHLLTEYG-NPMPATGFALGMERILL 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           AL           +   V      +   S+++       LR  G  AE+ +  
Sbjct: 324 ALMRQGGQIPPASKHVYV-----GYTDASINEAIRRATELRRQGKVAEIGMKG 371


>gi|322689661|ref|YP_004209395.1| histidyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|320460997|dbj|BAJ71617.1| histidyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 447

 Score =  165 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 124/477 (25%), Positives = 198/477 (41%), Gaps = 59/477 (12%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDD----- 77
             R++D++R ++E  GF  IET  +E   SL K        +K ++    LQ+       
Sbjct: 2   EQRVIDTLRKVFELNGFIGIETRAVETGASLLKKGE----TSKEIYLLSRLQEVGHESDT 57

Query: 78  --GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
              + + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D 
Sbjct: 58  PIEERLGLHFDLTVPLSRYVVEHSGALAFPFKRWQIQKVWRGERPQEGRFREFVQADIDV 117

Query: 136 V--GSSAETADAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  G   +  + E+ ++M   LE +         +  NNRK+ +G    +GL   +    
Sbjct: 118 IGAGDLPDHYEVELPLVMVSALEELRAYGLPKATVHANNRKLSEGFYRGLGLTDVE---- 173

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKS 251
              VLR IDKLDK G   V  LL E              L               D    
Sbjct: 174 --GVLREIDKLDKIGADEVARLLTETCGATEAQARACLELAELNASDGAELAAKFDALCE 231

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            H + +  +      +G + L +I +    +      +     I RGL+YYTG VYE  L
Sbjct: 232 AHGIVKDSEAYTLARQGLDTLAMIVD--EAAVIRPGSVIADLKIARGLDYYTGSVYETFL 289

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                         GS+  GGRYD L S+   +  P  G SIG+SRL+  +     +  N
Sbjct: 290 DGAA--------SLGSICSGGRYDNLASQ-GNRKYPGVGLSIGLSRLVSYMLHTAGAHAN 340

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 VL+   + +             LR  GI  ++   ++K  G Q+KYAD+   P 
Sbjct: 341 RVSPAAVLVAVWNEED--RPAANRIANQLRARGIATDVAPTAAK-LGKQIKYADKLGIPY 397

Query: 432 AII------------QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                              E       +K++  G++++ +  + E   +  VAQ T+
Sbjct: 398 VWFPATAAEGAEGAEPAGDE-------VKNIVTGEQVAADCTSWEP--DTVVAQQTV 445


>gi|296129652|ref|YP_003636902.1| histidyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021467|gb|ADG74703.1| histidyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 463

 Score =  165 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 133/483 (27%), Positives = 196/483 (40%), Gaps = 52/483 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R     GF +       +   +LD +R  +E +GF  IET  +E  D L +        +
Sbjct: 3   RPTPLSGFPEWLPDGRIVEQHVLDVLRRTFELHGFAGIETRAVEPLDQLLRKGE----TS 58

Query: 68  KGVFSL----QD------DDGQW----ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
           K V+ L    +D         +     + L +DLT P ARYV EN   + FP R Y+I  
Sbjct: 59  KEVYVLRRLQEDPETPAARGHREAEKGLGLHFDLTVPFARYVLENAGHLAFPFRRYQIQK 118

Query: 114 VFRNEKHGPGRFRQFIQCDVDNV--GSSAETADAEMCMMMADTLEAVGIK-RNDYHIGIN 170
           V+R E+   GRFR+F+Q DVD V  GS     + E+ ++MAD L A+         I +N
Sbjct: 119 VWRGERPQDGRFREFVQADVDVVGAGSLPYHYEVELPLVMADALGALRDLGVPPVRILVN 178

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           NRK+ +G    +GL   + +      LR IDKLDK G   V  +L               
Sbjct: 179 NRKVAEGFYRGLGLTDVEAV------LRGIDKLDKIGSDAVAEVLVAEAGATPAQAAACL 232

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR-- 288
            L +         ++ +    +  + EL     A      E +     +  +        
Sbjct: 233 ELAA---------VNGEDTGVVDRVRELAARYDASTDLLEEGLGELGALVAAAAERAPGV 283

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           +     I RGL+YYTG VYE +L              GS+  GGRYD L S       P 
Sbjct: 284 LVADLRIARGLDYYTGSVYETVLVG--------HEDLGSICSGGRYDTLASDGATT-YPG 334

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G SIG+SRL+  L S             VL+       +  +        LR+ GI  E
Sbjct: 335 VGLSIGVSRLVSRLLSAGLVRATRSVPTAVLVAVTS--EERRAASDAVAAALRSRGIPTE 392

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGT--GERSRGMLQIKDLAKGKELSREIKNNESW 466
           +   +SK FG Q+++ADRR  P     G    + +    ++KD+  G +   +       
Sbjct: 393 VAPSASK-FGKQIRHADRRGIPYVWFVGDTSDDGAPAQDEVKDIRTGAQQPADAATWAPP 451

Query: 467 REA 469
            E 
Sbjct: 452 GED 454


>gi|224282749|ref|ZP_03646071.1| histidyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 445

 Score =  165 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 127/474 (26%), Positives = 205/474 (43%), Gaps = 50/474 (10%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDD----- 77
             R++D++R ++E  GF  IET  +E   SL K        +K ++    LQ+       
Sbjct: 2   EQRVIDTLRRVFELNGFIGIETRAVEQGSSLLKKGE----TSKEIYLLSRLQEVGHESDT 57

Query: 78  --GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
                + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D 
Sbjct: 58  PVNDRLGLHFDLTVPLSRYVVEHSGDLAFPFKRWQIQKVWRGERPQEGRFREFVQADIDV 117

Query: 136 VGSS--AETADAEMCMMMADTLEAVGIKR-NDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +G+    +  + E+ ++M   LE +         +  NNRK+ +G    +GL   +    
Sbjct: 118 IGNGDLPDHYEVELPLVMVSALEELRAFGLPKATVHANNRKLSEGFYRGLGLTDIE---- 173

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGR-TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
              VLR IDKLDK G   V  LL +    D +              D        D   +
Sbjct: 174 --GVLREIDKLDKIGADEVAKLLVDTCGADEAQARACLELAELTAADGKELADKFDALCA 231

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            H + +         +G + L +I +    +      +     I RGL+YYTG VYE  L
Sbjct: 232 AHGIADDSDAYALARQGLDTLAMIVD--EAALIRPGAVIADLKIARGLDYYTGSVYETFL 289

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                         GS+  GGRYD L S+   +  P  G SIG+SRL+  +     +  +
Sbjct: 290 DGAA--------SLGSICSGGRYDNLASQ-GNRKYPGVGLSIGLSRLVSYMLHSAGAHAS 340

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 VL+   +      S   +    LR+ GI A++   ++K  G Q+KYAD+   P 
Sbjct: 341 RVCPASVLVAVWNEQD--RSAANLIANTLRSRGIAADVAPTAAK-LGKQIKYADKLGIPY 397

Query: 432 AIIQ-----GTGERSRGMLQIKDLAKGKELSREIKNNESWREARV-AQITIPIS 479
                    G    S    ++K++  G +   +  + +SW+   V A+ T+ I 
Sbjct: 398 VWFPAGATDGDDTASD---EVKNIVTGDQ---QPADPKSWQPDTVYARQTVVID 445


>gi|239620720|ref|ZP_04663751.1| histidyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|239516296|gb|EEQ56163.1| histidyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
          Length = 447

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 124/477 (25%), Positives = 198/477 (41%), Gaps = 59/477 (12%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDD----- 77
             R++D++R ++E  GF  IET  +E   SL K        +K ++    LQ+       
Sbjct: 2   EQRVIDTLRKVFELNGFIGIETRAVETGASLLKKGE----TSKEIYLLSRLQEVGHESDT 57

Query: 78  --GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
              + + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D 
Sbjct: 58  PIEERLGLHFDLTVPLSRYVVEHSGALAFPFKRWQIQKVWRGERPQEGRFREFVQADIDV 117

Query: 136 V--GSSAETADAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  G   +  + E+ ++M   LE +         +  NNRK+ +G    +GL   +    
Sbjct: 118 IGAGDLPDHYEVELPLVMVSALEELRAYGLPKATVHANNRKLSEGFYRGLGLTDVE---- 173

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKS 251
              VLR IDKLDK G   V  LL E              L               D    
Sbjct: 174 --GVLREIDKLDKIGADEVARLLTETCGATEAQARACLELAELTASDGAELAAKFDALCE 231

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            H + +  +      +G + L +I +    +      +     I RGL+YYTG VYE  L
Sbjct: 232 AHGIVKDSESYTLARQGLDTLAMIVD--EAAAIRPGSVIADLKIARGLDYYTGSVYETFL 289

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                         GS+  GGRYD L S+   +  P  G SIG+SRL+  +     +  N
Sbjct: 290 DGAA--------SLGSICSGGRYDNLASQ-GNRKYPGVGLSIGLSRLVSYMLHTAGAHAN 340

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 VL+   + +             LR  GI  ++   ++K  G Q+KYAD+   P 
Sbjct: 341 RVSPAAVLVAVWNEED--RPTANRIANQLRARGIATDVAPTAAK-LGKQIKYADKLGIPY 397

Query: 432 AII------------QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                              E       +K++  G++++ +  + E   +  VAQ T+
Sbjct: 398 VWFPATAAEGAEGAEPAGDE-------VKNIVTGEQVAADCTSWEP--DTVVAQQTV 445


>gi|293363449|ref|ZP_06610206.1| histidine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552969|gb|EFF41722.1| histidine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 461

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 97/477 (20%), Positives = 193/477 (40%), Gaps = 69/477 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +  +G  D       ++N +    + +  +  F  +ETP+LE+S+   K + + D  NK
Sbjct: 2   YKKVKGTIDYNPIHWYLKNMVTSQFKELSMSNDFSMVETPILEHSELFRKSVENSDIVNK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D   + ++LR + TAP  R   EN    +   +    GP+FR E+   GR+RQF
Sbjct: 62  EMYEFFDKAQRSLTLRPEGTAPFVRAYIENRWDTLDNQKFAYYGPMFRYEQPQSGRYRQF 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN---DYHIGINNRKILDGILEKIGLH 185
            Q  ++ VG+     D E+  + +  L+ + I+ N   +      +R   +  L+K  L 
Sbjct: 122 YQAGMEIVGTKNYLKDVEIIKLGSKLLDDLNIEYNLIINSIGDAQSRNEYEKALKKYLLP 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D+L+E          + +  L+G  L + + +  +  DF K A         +  F+S
Sbjct: 182 FKDQLSE----------ISQKRLEGNVLRILDDKIASKKDFMKNA-------PKISKFIS 224

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + +   +E+  L+                            + +I++ +VRGL+YY   
Sbjct: 225 EESKAYFNEITYLLDDF-----------------------QIKYQINNKLVRGLDYYDEV 261

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E +      ++        ++ GGGRY  L +   G+NV + G  IGI R++  ++ L
Sbjct: 262 VFEFV------SKNPMSGSQSTLIGGGRYSNLFALLGGKNVSSVGMGIGIDRIVFLIREL 315

Query: 366 ESSTNNIKEMGPVL------------------ITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                   +  P                          D+D+LS+         ++ ++ 
Sbjct: 316 IEKDYEQDKKNPDFKHKSLESYVLDDLNNIDIYIASSTDTDNLSELFTINDAFISSNLKT 375

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           +      K      + A++ N    I+   G +  G+  +K++  G++++   +  E
Sbjct: 376 KFEYDIIK-VKKIFERANKYNAAF-IMFDDGSKDDGLYVLKNMKTGEKINVSPEGTE 430


>gi|312601216|gb|ADQ90471.1| Histidyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 428

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 82/454 (18%), Positives = 172/454 (37%), Gaps = 50/454 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK  L    P+G  D   +  +I   +     +  + + F  IETP+ EY++      
Sbjct: 1   MKKKLNL---CPKGTYDFFGQSAKIFIDVRKVFFDQAKKFNFSYIETPIFEYANIFLTTN 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D  +K ++   D  G+ ++LR + TAP+ R VA++        + +  GP+FR E  
Sbjct: 58  QIADIVSKELYKFFDKSGRELALRPEGTAPIMRSVAQHKLFQTEK-KFFYFGPMFRYENP 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFRQF Q   + +    ++ + ++  ++   L    I ++        +      L 
Sbjct: 117 QKGRFRQFYQAGFEIINYKKDSLEFQILEII---LLIKSIFKDLRINEYELKINFLSNLT 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              ++  +           ++ + K  ++   L + + + +   DF K A         +
Sbjct: 174 TRNIYEKNLAQYFEKFSDKLESISKIRIKKNPLRILDDKIEKEKDFVKLA-------PKI 226

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +F +++ +   + +  +++                             K+   +VRGL+
Sbjct: 227 NTFWTMEDKNIFNRITSILEEFKII-----------------------YKVDYNLVRGLD 263

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   V+E I     +  K       ++ GGG Y+ L ++F   N  + G + GI RLI 
Sbjct: 264 YYDDFVFEFIDTSQTLGTK------LALVGGGCYNNLPTKFGLNNFKSIGMAFGIERLIE 317

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +KS ++      +        +      +       ++LR      ++   +  +    
Sbjct: 318 IIKSKKNIKEQNLD-----FFLLSFTDKEILLNFKLAKILRKENFLVDLN-KTPFSVSKG 371

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            + A +             +++  + +K+L  GK
Sbjct: 372 FQLAKKSGAKFVFFF-EKNQAKNYISLKNLQTGK 404


>gi|240047692|ref|YP_002961080.1| histidyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985264|emb|CAT05277.1| Histidyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 421

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 86/463 (18%), Positives = 165/463 (35%), Gaps = 58/463 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P+G  D   +   +   I D I  +   + +  IETP+ E+S+       + D  +K +
Sbjct: 7   RPKGTYDLYGQRANLFLEIRDKIFLVSNLFNYKYIETPIFEFSEVFFTSGDESDLVSKEL 66

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +  +D   + +SLR + TAP+ R + EN   +    + +  GP+FR E    GR RQF Q
Sbjct: 67  YEFKDKSNRSLSLRAEGTAPVMRALVENKIYLENK-KYFYFGPMFRYENPQKGRNRQFYQ 125

Query: 131 CDVDNV-----GSSAETADAEMCMMMADTLEAVGIKRNDYHIGI-NNRKILDGILEKIGL 184
              + +       S+     E+ ++    L+ +        I    +R      +  +  
Sbjct: 126 AGFEFINLSEDFRSSAYEKIEVLLLAIKMLKELNFSNYKIKINFLASRSTRKQYILALKQ 185

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           +        L     +    +  L    L + + + D   +F K A         + +F 
Sbjct: 186 Y-------FLKYSSQLSSTSQQRLAKNPLRILDDKIDAEKEFVKNA-------PKINAFY 231

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + + ++  + + +L+K                           + +I   +VRGL+YY  
Sbjct: 232 TPEEQEEFNFINKLLKSN-----------------------QIQFEIDYNLVRGLDYYDN 268

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E I   P +  K       ++ GGG Y+ L++ F        GF  G+ R       
Sbjct: 269 LVFEFIADSPFLGTK------STILGGGCYNNLIANFGMPAAKGIGFGFGVDRF------ 316

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           LE    N K+   +    +  +   L K     ++LR      E       +F    K A
Sbjct: 317 LEIQLPNYKKEHQIDFYCLSFNFAELEKLNEIARILRDNNYVVEFN-KKPTSFTKGFKKA 375

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            +      +      +    +  K +   +     I +  + +
Sbjct: 376 LKTKTKYLLFF-EKNQLENTITCKKIETNENKVFNISDLSNLK 417


>gi|255658431|ref|ZP_05403840.1| ATP phosphoribosyltransferase, regulatory subunit [Mitsuokella
           multacida DSM 20544]
 gi|260849767|gb|EEX69774.1| ATP phosphoribosyltransferase, regulatory subunit [Mitsuokella
           multacida DSM 20544]
          Length = 394

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 165/411 (40%), Gaps = 41/411 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+ +L  E+P G  D    E   +  I   +  ++  +G+D + TP +EY D+L   L
Sbjct: 1   MDKE-RLTLEIPYGMRDFLPTEAAEKRAIEAELAALFAEWGYDEVVTPTIEYLDNLT--L 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                    +F L D D + ++LR+++T P+AR  A        P +   +  VFR E+ 
Sbjct: 58  GASRALEPHLFKLFDKDNRTLALRHEMTTPIARLAASRLRDYPQPLKLSYVSSVFRYEQT 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +GS+   ADAE+  +    L   G+   D+ I +   + + GI+ 
Sbjct: 118 QAGRQCEFHQAGVELMGSATAFADAEVIALAIQGLLRAGLT--DFTICLGQVEFVSGIMN 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +  L  + K                   Q ++  L +    +        +L  +    +
Sbjct: 176 QYQLTDETK-------------------QTLQTALEKHDLVSFDRAIAALDLPEKAKKTL 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                ++    M +    +       +  + L  I  L++  G     ++    I+R   
Sbjct: 217 GYLPVLNGGAEMLKKSYTLALNEQSRRALDNLAEIYRLLQSYGVEQ-YVRFDLGIIRDFS 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA            P +   + GGGRYD L+S F     PATGF+IGI R+++
Sbjct: 276 YYTGMVFEAYT----------PGLGFPLAGGGRYDHLLSDFG-SACPATGFAIGIERILL 324

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           AL        +  +        + +            Q LR  G   E+ L
Sbjct: 325 ALTRQGLEKPDQPKDIY-----LGYAPGREHDAIQKAQELRAGGKVVELAL 370


>gi|148262740|ref|YP_001229446.1| ATP phosphoribosyltransferase regulatory subunit [Geobacter
           uraniireducens Rf4]
 gi|146396240|gb|ABQ24873.1| histidyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 438

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 86/442 (19%), Positives = 167/442 (37%), Gaps = 42/442 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           + A LP+G  D   ++      I   I  +++ +GF  I TPLLE+ D +   + ++   
Sbjct: 11  IEAPLPKGVTDFLPEKADKIAYIEGKISRVFDLWGFRRIITPLLEFQDVISMGMGED--L 68

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               F   D   G+ +++  D+T  +AR VA        P R    G V R+ +   GR 
Sbjct: 69  KAKTFRFDDRQTGRLLAIPPDITPQIARIVATRMHGYPLPHRISYNGRVLRHAEIQSGRS 128

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+  Q  V+ +G S+  ADAEM  M  + L+ +G   +++ I +       GI+      
Sbjct: 129 REVFQSGVELIGLSSPEADAEMVAMAVEVLQGLGF--DNFKIDLGQVDFFRGIM------ 180

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                            L       ++  + +  +    +  +   +     + + +   
Sbjct: 181 -------------LASGLAPAVQNLLQEAIAKKDSSAVREILEKEPVADAIKEEIAALPR 227

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +   + +  + E V G    +K  + +  + E++   G   + + I    +RGL+Y+TG 
Sbjct: 228 LYGGREVLAVAERVAGNDRSKKALDNIAQVLEILDIYGVT-DYLTIDLGEIRGLDYHTGV 286

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E  +G           +  +V GGGRYD L +++          +     ++  L +L
Sbjct: 287 TFEGFVG----------GLGEAVCGGGRYDDLTAKYGF----PAPATGFAFNILALLNAL 332

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                         +     +     +     Q LR  G      +   ++F N L YA 
Sbjct: 333 GKRPEVEASKTRDFLLFNLKED--RREVLEIAQRLRARGFTTARDII-HRDFDNSLAYAK 389

Query: 426 RRNCPLAIIQGTGERSRGMLQI 447
           R N    ++ G    +   + +
Sbjct: 390 RMNIKQMLVIGGDYCADDEVYV 411


>gi|171743323|ref|ZP_02919130.1| hypothetical protein BIFDEN_02454 [Bifidobacterium dentium ATCC
           27678]
 gi|283455704|ref|YP_003360268.1| histidyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|171278937|gb|EDT46598.1| hypothetical protein BIFDEN_02454 [Bifidobacterium dentium ATCC
           27678]
 gi|283102338|gb|ADB09444.1| HisS Histidyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 444

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 125/467 (26%), Positives = 202/467 (43%), Gaps = 42/467 (8%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF---SLQDDD----- 77
             R++D++RN++E  GF  IET  +E   SL K        +K ++    LQ+       
Sbjct: 2   EQRVIDTLRNVFELNGFIGIETRAVEQGSSLLKKGE----TSKEIYLLSRLQEVGHESDT 57

Query: 78  --GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
                + L +DLT PL+RYV E+   + FP + ++I  V+R E+   GRFR+F+Q D+D 
Sbjct: 58  PIEDRLGLHFDLTVPLSRYVVEHSGDLAFPFKRWQIQKVWRGERPQEGRFREFVQADIDV 117

Query: 136 VGSS--AETADAEMCMMMADTLEAVGIKR-NDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +G+    +  + E+ ++M   LE +         +  NNRK+ +G    +GL   +    
Sbjct: 118 IGNGDLPDHYEVELPLVMVSALERLREFGLPKATVHANNRKLSEGFYRGLGLTDVE---- 173

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL-SIDLEKS 251
              VLR IDKLDK G   V  LL EG   N         L               D   +
Sbjct: 174 --GVLREIDKLDKIGADEVAKLLVEGCGANENQARACLELAELTAANGADLAEKFDALCA 231

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            H++       +   +G + L +I +    +      +     I RGL+YYTG VYE  L
Sbjct: 232 KHDIAADSDAYVLARQGLDTLAMIVD--EAARIRPGSVIADLKIARGLDYYTGSVYETFL 289

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                         GS+  GGRYD L S+   +  P  G SIG+SRL+  +     +  N
Sbjct: 290 DGAA--------SLGSICSGGRYDNLASQ-GNKKYPGVGLSIGLSRLVSYMLHAAGAHAN 340

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 VL+   +      S   +    LR  GI A++   ++K  G Q+KYAD+   P 
Sbjct: 341 RVSPASVLVAVWNEAD--RSASNVIANQLRARGIAADVAPTAAK-LGKQIKYADKLGVPY 397

Query: 432 AIIQGTGERSRGML--QIKDLAKGKELSREIKNNESWREARVAQITI 476
                  + +   +  ++K++  G +   + ++ E         +T+
Sbjct: 398 VWF--PSDAAEDGVGDEVKNIITGDQQPADARSWEPDTVYARQTVTV 442


>gi|225026496|ref|ZP_03715688.1| hypothetical protein EUBHAL_00745 [Eubacterium hallii DSM 3353]
 gi|224956184|gb|EEG37393.1| hypothetical protein EUBHAL_00745 [Eubacterium hallii DSM 3353]
          Length = 421

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 88/458 (19%), Positives = 169/458 (36%), Gaps = 47/458 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E + ++ +   I +I E YG+  IETP  E+ D            +  +
Sbjct: 8   TPEGVRDIYNSECKRKSAVEKRIHHILELYGYQDIETPTFEFFDIFNSDTG--TVSSVEM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           F   D +   + LR D+T  +AR VA+ +    FP R    G  F N +   G+  +  +
Sbjct: 66  FKFFDRNNNTLVLRPDMTPSIARSVAKYYSACEFPLRLSYRGNTFLNNRSYQGKLTEKTE 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              + +   +  ADAE  +MM D   A G+   D+ I I   +   GI+  +    + K 
Sbjct: 126 MGAELINDDSPEADAEGIIMMIDCFLAAGLT--DFRIDIGQAEFYKGIMGALEASEEVK- 182

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                             + +   +               ++     +I++ +  +  + 
Sbjct: 183 ------------------EQIHEYIENKNALGMEILLSDLSMKDCYRNILLEYNDLYGDV 224

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           +M E  + +      +     L  + E+++  GY    +     +V   +YYTG ++   
Sbjct: 225 TMLEKAKKLTINPRCQAAIARLEEVYEVLKLYGY-EKYVSFDLGMVNHFDYYTGIIFRGY 283

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                           ++G GGRYD L+++F  +   A GF+I I  ++ AL     S  
Sbjct: 284 T----------YGTGDAIGKGGRYDNLLAQFG-KEASACGFTILIDDVLSALSRQNISI- 331

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFGNQLKYADRRNC 429
               +     + + + S+           LR AG+R E + +   K     L +   +  
Sbjct: 332 ---SLKEYAYSLLLYKSEDRQNAIPLVVKLRDAGVRTELVSMTEGKTLEEYLAFGKNQGA 388

Query: 430 PLAIIQ-GTGERSRGMLQIKDLAKGKELSREIKNNESW 466
              +   G        + + D+A G + ++ ++     
Sbjct: 389 EGILYLDGEN------VTVYDMASGDQETKTLQEFREE 420


>gi|330723455|gb|AEC45825.1| histidyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 438

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 87/504 (17%), Positives = 193/504 (38%), Gaps = 80/504 (15%)

Query: 1   MGK---------KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLE 51
           M K         KT +  + P+G  D   K+  +   I DS   +  ++ F  IETP+ E
Sbjct: 1   MNKQQINLNDDSKTNINYK-PKGTQDIFGKKKEVFLHIRDSFFQVANSFNFQYIETPIFE 59

Query: 52  YSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRI 111
           +++         D  NK ++  +D + + ++LR + TAP+ R + EN   +    + +  
Sbjct: 60  FANIFLSSGQSSDIVNKQMYEFKDKNDRLLALRPEGTAPVIRAINENKLYLE-HNKFFYF 118

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN- 170
           GP+FR E+   GR RQF Q  ++ +   +     E+       L  + + ++        
Sbjct: 119 GPMFRYERPQKGRNRQFYQAGIEYINLDSNLIKLEVLDFAKQLLTKLDLLKDTTLKINYL 178

Query: 171 ----NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
                R +    L+K  L+  D+L        +     +  +  +++L  +   D     
Sbjct: 179 ATQEQRNLYSDYLKKYLLNYKDQL--------SFISQTRLDVNPLRILDEKQDADKEF-- 228

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
                   +Q   +  F + + ++   ++  L++                         +
Sbjct: 229 -------VKQAPKLQDFYTQEQKEEFEQIQRLLQQN-----------------------N 258

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
              ++   +VRGL+YY   V+E +      +E +      ++  GG Y+GL +RF G ++
Sbjct: 259 INFEVDPLLVRGLDYYDNLVFEFV------SESKYLGTKSTILAGGCYNGLFTRFAGPDL 312

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
              GF++G+ R+   L     + + + +   +    +  + + ++        LR    R
Sbjct: 313 KGIGFALGVDRIAEIL----INNDELFKEFFLDFFILALNEEEIANVTKLVSNLRFLNFR 368

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            +       +F    K + +      +I     + +    IK+     +  + I+ +E  
Sbjct: 369 VDFNKKLFNSFAKAFKNSTKWKAKY-LIFKEKNQPQDKWTIKN----SQTLKNIEISEED 423

Query: 467 REARVAQITIPISELVSTVKKILQ 490
            + +         E+++ ++K+  
Sbjct: 424 LKDK---------EILNKLEKLFN 438


>gi|95928510|ref|ZP_01311257.1| Histidine--tRNA ligase [Desulfuromonas acetoxidans DSM 684]
 gi|95135300|gb|EAT16952.1| Histidine--tRNA ligase [Desulfuromonas acetoxidans DSM 684]
          Length = 434

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 85/466 (18%), Positives = 170/466 (36%), Gaps = 46/466 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     + A +P+G  D           +   + ++++ +GF PI  P LE+ D L + L
Sbjct: 9   MKTTATIEAMIPKGVKDFLPLNSVKIEHLKSCLHDVFKQWGFQPITPPSLEFLDVLEQGL 68

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            ++    +      D   G+ ++   D+T  +AR  A        P R      V R+ +
Sbjct: 69  GND--LKECTLRFDDRQSGKLLAFPPDITPQVARIFATRLKEAPLPQRLCYSCRVLRHTE 126

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              G+ R+  Q  V+ +G +   ADAEM  M  +  + +      Y I I   +   G L
Sbjct: 127 EQAGKDREVFQSGVELIGHNGPQADAEMIAMALECFDRLAT--PQYTIDIGQVEFYRGAL 184

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +                    L    L  V+  +    + +     +  N++  + D 
Sbjct: 185 NSL-------------------NLTPQDLCAVQQDILRKDSSSLKQHLETLNISDAEKDE 225

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +++   +   +S+ +    V      ++  ++L  + + +   G +   I +    +RGL
Sbjct: 226 ILALPRLFGNRSVLDQAATVVTNDRSKRALDDLHSVLKTLEIYGVDQ-HITVDLGELRGL 284

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG  ++  L               +V  GGRYD L + +     PATGF+  +  L+
Sbjct: 285 DYYTGITFQGFLS----------GYGQAVCLGGRYDNLTAGYG-LQAPATGFAFNLLNLL 333

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            ++    S T        +         +   +     + LR  G    + +   +    
Sbjct: 334 FSMSDELSQTIQPATEILIHCC-----DNETGQAHSVARQLRAQGRSVCIDI--PRTLEQ 386

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              YA + N    +       +   +++K L+ G+  +  +    S
Sbjct: 387 AQTYAKKMNFTYLMTV---TATSDQIEVKTLSDGQNTTISMAELTS 429


>gi|118578958|ref|YP_900208.1| ATP phosphoribosyltransferase regulatory subunit [Pelobacter
           propionicus DSM 2379]
 gi|118501668|gb|ABK98150.1| histidyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 445

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 96/463 (20%), Positives = 171/463 (36%), Gaps = 46/463 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M         LP G +D           I D IR ++E +GF  + TP LEY D +   L
Sbjct: 10  MN-NRLPDISLPFGVSDFLPDAAAKIGYIEDRIRRVFELWGFRRVITPKLEYEDVMALGL 68

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            D  +     +   D   G+ ++   D+T  +AR VA        P R    G V R  +
Sbjct: 69  GDGLKNK--TYRFDDRQTGRLLAFPPDITPQIARIVATRLAASPLPHRISYSGRVLRQTE 126

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR R+  Q  V+ +G  +  ADAEM  M  + L+ +G    D+ I +   +   GI+
Sbjct: 127 SQTGRSREIFQSGVELIGLDSPEADAEMVAMAVEALQGLGFS--DFKIDLGQVEFFRGIV 184

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E                      L    L+ +   +              + L+ E    
Sbjct: 185 ES-------------------SGLSGQPLRDLLEAVARKDASAVARICAESPLSEESRRE 225

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + S   +   + + E  + V          + L  + +++   G  S+ + I     RGL
Sbjct: 226 IASLPRLFGGREVVEAADRVACNSRSRAALDNLRQVLDILDIHGV-SDYLTIDLGETRGL 284

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +Y+TG  +E  +            +   V GGGRYD L  R+  +    T  +     ++
Sbjct: 285 DYHTGITFEGFVT----------GLGVPVCGGGRYDSLAGRYGFE----TPATGFTFDVL 330

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L++LE     ++          +  SD   +     ++LR+ G      +   ++   
Sbjct: 331 SLLQALERRP-ELEASTARDFLLFNRGSDRR-QALETARLLRSRGYSTARDIIR-RDVQP 387

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            L+YA R N    ++ G  E  +G++  + +      +  + +
Sbjct: 388 SLEYARRMNIRCMLVMG-DESDKGVV--RAIRTRDGKTVRLAS 427


>gi|307128507|ref|YP_003880537.1| histidyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306482969|gb|ADM89839.1| histidyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 448

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 104/440 (23%), Positives = 177/440 (40%), Gaps = 51/440 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
              +P G  D  T EIR R+ I++ I+  +E +GF PIET  +E    L GK+  +    
Sbjct: 3   NISIPYGTRDFSTNEIRKRDYIINIIKKNFELFGFSPIETTSIENISILQGKYGEEG--- 59

Query: 67  NKGVFSLQDDD---GQWI----------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F + +        +          +LRYDLT P ARYV  N + I FP + Y+I P
Sbjct: 60  EKLIFKIINSGIILNNSLLSNKNKICKKALRYDLTVPFARYVVMNKNKIFFPFKRYQIQP 119

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R EK   GRFR+F QCDVD++GS +   + E+ ++       + +        I   K
Sbjct: 120 VWRAEKPQKGRFREFYQCDVDSIGSKSIWQEIELILLYDKIFYELNLPVIIKFNHIEILK 179

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L   L                               +     +  +           ++
Sbjct: 180 QLSAFLGI--------------------NKKFIEFTKILDKWEKIGSKKIFKKLIQIGIS 219

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
              +  +  F     EK++ ++Y             NE+  I ++++     S+++    
Sbjct: 220 KYLLKKI--FFLFKEEKNILKIYNFFLPLKKCFHFINEIKFIFKIIKNFKLKSSKLIFKP 277

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK-GQNVPATGFS 352
            + RGL YYTG ++E +                S+ GGGRYD L   F   + +   G S
Sbjct: 278 NLARGLNYYTGIIFEVLTENNN--------NLFSISGGGRYDNLTKIFVLKKKLSGIGIS 329

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
            G+ R+ +++  +        +   V+     ++    S   +    LR  GI +E++  
Sbjct: 330 FGLDRIYISMLEMNLFKKFFFKYLDVIFINFGYNESIYSYKLIL--ELRKNGISSELYPD 387

Query: 413 SSKNFGNQLKYADRRNCPLA 432
           + K    QLKYA+++     
Sbjct: 388 NIK-IKKQLKYANKKKINFV 406


>gi|304372945|ref|YP_003856154.1| Histidyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309136|gb|ADM21616.1| Histidyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 438

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 88/504 (17%), Positives = 194/504 (38%), Gaps = 80/504 (15%)

Query: 1   MGK---------KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLE 51
           M K         KT +  + P+G  D   K+  +   I DS   +  ++ F  IETP+ E
Sbjct: 1   MNKQQINLNDDSKTNINYK-PKGTQDIFGKKKEVFLHIRDSFFQVANSFNFQYIETPIFE 59

Query: 52  YSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRI 111
           +++         D  NK ++  +D + + ++LR + TAP+ R + EN   +    + +  
Sbjct: 60  FANIFLSSGQSSDIVNKQMYEFKDKNNRLLALRPEGTAPVIRAINENKLYLE-HNKFFYF 118

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK-----RNDYH 166
           GP+FR E+   GR RQF Q  ++ +   +     E+       L  + +      + +Y 
Sbjct: 119 GPMFRYERPQKGRNRQFYQAGIEYINLDSNLIKLEVLDFAKQLLTKLDLLKDTILKINYL 178

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
                R +    L+K  L+  D+L        +     +  +  +++L  +   D     
Sbjct: 179 ATQEQRNLYSDYLKKYLLNYKDQL--------SFISQTRLDVNPLRILDEKQDADKEF-- 228

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
                   +Q   +  F + + ++   ++  L++                         +
Sbjct: 229 -------VKQAPKLQDFYTQEQKEEFEQIQRLLQQN-----------------------N 258

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
              ++   +VRGL+YY   V+E +      +E +      ++  GG Y+GL +RF G ++
Sbjct: 259 INFEVDPLLVRGLDYYDNLVFEFV------SESKYLGTKSTILAGGCYNGLFTRFAGPDL 312

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
              GF++G+ R+   L     + + + +   +    +  + + ++        LR    R
Sbjct: 313 IGIGFALGVDRIAEIL----INNDELFKEFFLDFFILALNEEEIANVTKLVSNLRFLNFR 368

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            +       +F    K + +      +I     + +    IK+     +  + I+ +E  
Sbjct: 369 VDFNKKLFNSFAKAFKNSTKWKAKY-LIFKEKNQPQDKWTIKN----SQTLKNIEISEED 423

Query: 467 REARVAQITIPISELVSTVKKILQ 490
            + +         E+++ ++K+  
Sbjct: 424 LKDK---------EILNKLEKLFN 438


>gi|303240579|ref|ZP_07327094.1| histidyl-tRNA synthetase 2 [Acetivibrio cellulolyticus CD2]
 gi|302591816|gb|EFL61549.1| histidyl-tRNA synthetase 2 [Acetivibrio cellulolyticus CD2]
          Length = 418

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 92/459 (20%), Positives = 183/459 (39%), Gaps = 45/459 (9%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
           TK +   P G  D    E  ++  + + IR ++ + GF  +ETP++E+ D+      D  
Sbjct: 2   TKWKIYTPEGVQDVLVNECFVKRNLEEKIRKVFRSSGFYEVETPIVEFYDAFLA--EDGI 59

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              + +F   D  G+ + LR ++T P+AR  A  +  +  P R   IG  F  ++ G G+
Sbjct: 60  TAQETMFKFFDQQGRILVLRPEITIPIARLAATKYKDVSHPLRFCYIGNTFNYKELGGGK 119

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            ++F Q  V+ +G ++  ADAE+     + + A G++     I I       G++E+ GL
Sbjct: 120 QKEFTQAGVELMGINSPEADAEVIATAINAVRASGLESFQ--IDIGQVDFFKGLMEETGL 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             ++                    + +++L+         +  K  N+  +  ++++S  
Sbjct: 178 SAEE-------------------TEQMRVLIDRKDYLAVEELVKTHNIREDLKELVLSLP 218

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +     + +  E              L  + +++   G  S  + I   +V+ L YYTG
Sbjct: 219 RLFGSLDVIDSVEKYSLNKKSINALENLRRVIKILDDYG-LSKYVSIDLGMVQSLNYYTG 277

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++                    +  GGRYD LV +F   + PATGFS+GI+ +++AL  
Sbjct: 278 IIFRGFT----------YGAGFPILSGGRYDKLVEKFGKVS-PATGFSLGINMIMMALDR 326

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +  +        +         +         Q LR  G+  E+ +  +    +  +YA
Sbjct: 327 QKIESEKPSIDSLICYR-----EEGRKTAFRVCQALRDQGLVVEIDVTGNG-MEDVKEYA 380

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             +     I           +++ ++ K +  +  I   
Sbjct: 381 RTKGIGGVISI----LDDQRIEVHNIEKHETSTVTIDEL 415


>gi|218132198|ref|ZP_03461002.1| hypothetical protein BACPEC_00055 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992891|gb|EEC58891.1| hypothetical protein BACPEC_00055 [Bacteroides pectinophilus ATCC
           43243]
          Length = 421

 Score =  163 bits (411), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 96/467 (20%), Positives = 179/467 (38%), Gaps = 54/467 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+  L    P G  D    E   +  + + I ++ ++YG++ I TP  E+ D   K  
Sbjct: 1   MKKERLL--HTPEGVRDIYNGECARKLMVQNRIHDVLKSYGYNDISTPTFEFFDVFNK-- 56

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 +  +F   D DG  + LR D+T  +AR  A+ +       +   IG  F N  +
Sbjct: 57  ERGSVASNEMFKFFDRDGNTLVLRPDMTPSIARTAAKYYGDSNMTLKLCYIGNTFINNHN 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR ++  Q   + +G S+  ADAE+  M+ D+L + G+K     + I   +   G+L+
Sbjct: 117 YQGRLKETTQIGAELIGDSSIYADAEIISMVIDSLLSSGLKEFQ--VEIGQVQFFRGLLK 174

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           + G+  D +                     +  L+         +  K  NL     D +
Sbjct: 175 EAGIDTDTE-------------------DELVELMLNKNFYGVEELLKSQNLDDSLTDTL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +    +     + +    +       +    L  +  ++ ++GY+   I     ++   +
Sbjct: 216 LVLPQLFGSVEVLDRARSITSNEEALEAIAYLEELYGMLAQNGYDK-YITFDLGMLSKHK 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++                   +V  GGRYD L+ +F   +  + GFS+   +L+V
Sbjct: 275 YYTGVIFNGYT----------YGTGDAVVKGGRYDKLIGQFG-SDKASIGFSLTADQLMV 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +L T         S+       LR AG+ A M    S++  + 
Sbjct: 324 ALERQKIEIPCDRNGVMILHTP-----SQWSRAVKLAAQLRNAGVSASMLC--SRSIDDS 376

Query: 421 --LKYADRRNCPLAIIQ--GTGERSRGMLQIKDLAKGKELSREIKNN 463
               YA+  +    I    G        ++I +LA G   +   ++ 
Sbjct: 377 ECRAYAESSDITDIISMTDGED------VRILNLASGDIKTAAAQDV 417


>gi|295698546|ref|YP_003603201.1| histidyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157360|gb|ADD79805.1| histidyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 435

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 93/445 (20%), Positives = 166/445 (37%), Gaps = 51/445 (11%)

Query: 1   MGKKTKLR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M K    R     RG  D   ++  I   +   I+ I   YGF  I TP+LE ++   + 
Sbjct: 1   MLKNDMFRNVRSLRGMKDILPRDSHIYRTLESKIQEILFQYGFQEIRTPILEKTELFERT 60

Query: 60  LP-DEDRPNKGVFSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           +    +   K +++  +      ISLR + T   AR   EN        R + +GP+FR 
Sbjct: 61  IGKKTEVVRKEMYTFLNKRGNTRISLRPENTVSCARAGIENGLFRNKKQRLWYLGPMFRY 120

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           ++   GR RQF Q  ++  G ++   DAE+  +M    +++    + Y     N      
Sbjct: 121 DRPQYGRNRQFHQLGIEMFGFNSPVFDAELISIMFKIWKSLA--IDQYITLELNSIGSIS 178

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             E             L  L   D+        ++LL  +    +       A L  E I
Sbjct: 179 DREIYRNSLKKFFQSNLKKLSLEDQKMAIS-DPIRLLDSKD--PDLNQLLVHAPLLEEYI 235

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
                                      G++  +    +  +++K G    R  I+  +VR
Sbjct: 236 ---------------------------GKECMDHFYELCRILQKIG---IRYVINKRLVR 265

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS-RFKGQNVPATGFSIGIS 356
           GL+YY   V+E + G              ++  GGRYD L+      ++VP+ G +IGI 
Sbjct: 266 GLDYYNRTVFEWVSGISNF--------QKTICAGGRYDYLMDLLGYNRSVPSLGCAIGIE 317

Query: 357 RLIVALKSLESS-TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGS 413
           RL++ ++ +     +       + I        +  +   +++ +R+    +   +  GS
Sbjct: 318 RLVILIEEVNQDLIHEYHNSKLIDIYLCKQGLINSEEIFFFSERIRSRIKNVSIMIHHGS 377

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTG 438
            K    Q+  A + N  + II    
Sbjct: 378 DKT-KKQVSKAIQNNAKIVIILKEN 401


>gi|313678620|ref|YP_004056360.1| histidine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950383|gb|ADR24978.1| histidine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 438

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 94/463 (20%), Positives = 168/463 (36%), Gaps = 57/463 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
               +G +D  T +I  R  IL     + E   F+ +ETP+LE +D   + +   D  +K
Sbjct: 2   FNRVKGTSDYITSDIEKREGILREFFRLIELNCFNLVETPILESADLYKRSVAGSDIVSK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDT------IVFPCRTYRIGPVFRNEKHGP 122
            ++   D   + +SLR + TA   R + EN              +    GP+FR E+   
Sbjct: 62  EMYEFTDKGNRILSLRPEGTAGFIRALIENKWHVINDEFWPRTTKFAYYGPMFRYEQPQK 121

Query: 123 GRFRQFIQCDVDNVG----SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           GR RQF Q  V+ +           DAE+  M  + L+++G+        I ++K  +  
Sbjct: 122 GRMRQFYQAGVEIIDGKSGDLNIYQDAELINMAYELLDSLGVGFVLKINSIGDQKCRNKY 181

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E++  + +             D+L     + +K  +     D             ++  
Sbjct: 182 QEELRKYLEQ----------YKDELTPINQERLKNNVFRILDDKVDSQKPFM----KKAP 227

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +  FLS        +   L+                          + + +I  ++VRG
Sbjct: 228 KLKDFLSSKSRDHFKKTLMLLD-----------------------ILNIKYEIDFSLVRG 264

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   VYE +                ++ GGGRY  LV    G ++ A G+ +GI RL
Sbjct: 265 LDYYDEIVYEFVSSAKDA------GSQSTIIGGGRYSNLVKELGGPDLFAAGWGLGIDRL 318

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I  +K  +    +      + I     + D         + LR  G        + K+  
Sbjct: 319 IDIMKIEQGEEYSQDIEDNIDIVIGTSNPDYKILLFGIAKGLRDNGFSTNFIYETIKS-K 377

Query: 419 NQLKYADRRNCPLAIIQGTGERS-RGMLQIKDLAKGKELSREI 460
              + A +       +    E+   G   +K+L  GK++   +
Sbjct: 378 KIYEKAQKNGAQY--LISDDEKDPNGYCFVKNLFNGKKIKFNL 418


>gi|153810862|ref|ZP_01963530.1| hypothetical protein RUMOBE_01246 [Ruminococcus obeum ATCC 29174]
 gi|149833258|gb|EDM88340.1| hypothetical protein RUMOBE_01246 [Ruminococcus obeum ATCC 29174]
          Length = 372

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 77/397 (19%), Positives = 147/397 (37%), Gaps = 40/397 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
               P G  D    E   ++ +   IR ++++YG++ IETP  EY +   + +     P+
Sbjct: 4   IFHTPEGVRDIYNGECSQKHHLQTEIRKVFDSYGYEEIETPSFEYFEVFSREVG--TIPS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++   D +G  + LR D T  ++R  A  F+           G  F N     GR ++
Sbjct: 62  KDLYKFFDREGNTLVLRPDFTPSVSRACATYFNPEHQVITLSYTGNTFINNSSYQGRLKE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q  V+ +G  +  ADAE+  M  + L   G+K     + +        +L+   L  +
Sbjct: 122 TTQMGVERIGDDSAEADAELLAMTVECLLKAGLKEFQ--VSVGQVDYFKSLLQDANLDIE 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           ++                   + ++ L+ +       D  +  N+        +    + 
Sbjct: 180 EE-------------------ENLRSLISQKNYFGVEDLVRSQNIPESLEKAFLELPHLF 220

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
               + +    +   I   K    L  I E+++  GY    +     ++   +YYTG ++
Sbjct: 221 GSSEILQKARSLTDNICAIKAVERLEEIYEILKIYGY-EKYVSFDFGMLSKFQYYTGIIF 279

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +A                  V  GGRY+ L+  F  +   + GF I +  L++AL   + 
Sbjct: 280 QAYT----------YGTGEPVVKGGRYNNLLKHFG-KPAASIGFGITVDNLLMALSRQKI 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           S    K         + +   +  +  +  Q LR  G
Sbjct: 329 SLPEKKAP-----VILTYTEANRREAILEAQKLRNEG 360


>gi|325919029|ref|ZP_08181090.1| histidyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325550465|gb|EGD21258.1| histidyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 389

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 112/368 (30%), Positives = 176/368 (47%), Gaps = 30/368 (8%)

Query: 82  SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
           +LR+DLT PLARYVAE+   + FP R Y++  V+R E+   GRFR+F QCD+D +G  A 
Sbjct: 1   ALRFDLTVPLARYVAEHEHELSFPFRRYQMQRVYRGERAQRGRFREFYQCDIDVIGKDAL 60

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
           +   +  ++         +   D+ + +NNRK+L G  E +G+   +    +L VLR +D
Sbjct: 61  SIRYDAEVLAVIHAVFAELGIGDFKVQLNNRKLLRGFFESLGVAEGE---LQLAVLREVD 117

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL--- 258
           K+DK G   V+  L            +G  + +EQ+D +++F+++        L +L   
Sbjct: 118 KIDKRGADYVRDTL----------VGEGFGIAAEQVDKILAFVAVRSNGHADALAQLQAL 167

Query: 259 ---VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              V  +    +G  EL  + ELV+  G   +   ++ +I RGL+YYTG VYE  L    
Sbjct: 168 DASVGASATLGEGIAELREVLELVKALGVPESAYCLNFSIARGLDYYTGTVYETTLTD-- 225

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
                     GS+  GGRY+ L S +    +P  G SIG++RL   L+         +  
Sbjct: 226 ------HPQIGSICSGGRYESLASHYTKSKLPGVGISIGLTRLFWQLREAGLIQGIAESS 279

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
              ++  M  D   L       + LR  GI  E+ +   K  G Q +YA R      ++ 
Sbjct: 280 VHAMVALM--DESRLGDALDIARRLRIGGINTEVQM-EPKKIGKQFQYAARAGIRFVVLA 336

Query: 436 GTGERSRG 443
           G  E +RG
Sbjct: 337 GDDELARG 344


>gi|326203377|ref|ZP_08193242.1| histidyl-tRNA synthetase 2 [Clostridium papyrosolvens DSM 2782]
 gi|325986635|gb|EGD47466.1| histidyl-tRNA synthetase 2 [Clostridium papyrosolvens DSM 2782]
          Length = 419

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 95/458 (20%), Positives = 179/458 (39%), Gaps = 49/458 (10%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
           ++ +   P G  D    E  ++  I   IRN + +YG+  IETP +E+ D     +    
Sbjct: 2   SRWKIYTPDGVQDILFDECYVKREIEKRIRNTFRSYGYYEIETPTIEFFDVFSSEIEH-- 59

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            P + +    D  G+ + LR D+T P+AR  A     +  P +   IG VFR  + G GR
Sbjct: 60  FPQESMVKFFDQKGRILVLRPDITVPVARITATKNRDVQLPIKYSYIGNVFRFNEVGGGR 119

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             +F Q  V+ +G S+  +DAE+  M  +TL+A G+K  ++ I I   +   G+ E+ G 
Sbjct: 120 QNEFTQAGVEMLGDSSSESDAEIIAMAINTLKAAGLK--EFKIEIGQVEFFKGLAEEAGF 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +D                   +  +   + +       +      +++    +++   
Sbjct: 178 SSED-------------------IDAISKQIDKKDLVGVEEILNRYEISARLKQLILKLT 218

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +     + + ++         K    +  +  ++   G  S  + I   +++ L Y TG
Sbjct: 219 GLFGLADVIQEFKNSSINERSLKAIENIEEVVSILSDYG-LSEYVSIDLGMLKSLNYDTG 277

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +                V   +  GGRYD L S F  +  PATGFS+ I+ L+ A+++
Sbjct: 278 ITFRGFTN----------GVGFPILSGGRYDNLTSSFG-KECPATGFSVRINMLMTAMEN 326

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFGNQLKY 423
              +         +       +  +  +     + LR   ++ E   L  + + G   KY
Sbjct: 327 SGITFERPSVDSLICY-----EKTNRKRAIEIAEALRKQDMKIETFVLTENIDQGK--KY 379

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDL--AKGKELSRE 459
           A  +     I  G  +     + + D+     +E S  
Sbjct: 380 ASSKTIGGIIYIGEND----KITVYDMINDTKEETSFN 413


>gi|160943129|ref|ZP_02090366.1| hypothetical protein FAEPRAM212_00609 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445598|gb|EDP22601.1| hypothetical protein FAEPRAM212_00609 [Faecalibacterium prausnitzii
           M21/2]
          Length = 413

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 114/429 (26%), Positives = 175/429 (40%), Gaps = 55/429 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ +  +G  D    E  +R+ I   I   Y + GF+ I TP+LE  ++L K     D  
Sbjct: 1   MKTQALKGMRDLLPAEQTLRDYIQGKILETYRSAGFERISTPMLEDMENLDKS-EGGDNL 59

Query: 67  NKGVFSLQDDDGQ--------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           N  +F +     +               + LRYDLT PL+RY A N D +  P +  +  
Sbjct: 60  N-LIFKVLKRGDKLTAALNTGDPKQLSDMGLRYDLTLPLSRYYAANKDKLPNPFKVIQTD 118

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            VFR E+   GR R+F+QCD+D +G ++  A+ E+  +    L  +G     + + IN+R
Sbjct: 119 RVFRAERPQKGRLREFVQCDIDILGDASPNAEVELIDVTTRALLNIGFTG--FTVNINDR 176

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           +IL G+LE +G   D        V    DK+DK G +GVK  L E +            L
Sbjct: 177 RILRGMLESMGFAADTL----DSVCITFDKMDKIGAEGVKAELTEKQ------------L 220

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
               I  +  F++   + ++  +              ++L  +            ++   
Sbjct: 221 PESAIQALADFIAA-GDVTLDAVAARCADPAIA----DDLKYVLATANTLAAGRYQVAYC 275

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            ++VRG  YYTG V+E             P   G+V GGGRYD +V +F G  VPA GFS
Sbjct: 276 PSLVRGQGYYTGMVFEVT----------CPQFSGAVAGGGRYDNMVGKFLGVQVPAVGFS 325

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG  R+   L          K+     I  +                LR       +   
Sbjct: 326 IGFERVCGILLEQGYQIPGAKQ----KIALLYGKDTDFPAVLSKAAALREQ-YNVTVLP- 379

Query: 413 SSKNFGNQL 421
             K  G QL
Sbjct: 380 QGKKLGKQL 388


>gi|148377713|ref|YP_001256589.1| histidyl-tRNA synthetase (histidine-trnaligase) (HisRS) [Mycoplasma
           agalactiae PG2]
 gi|148291759|emb|CAL59148.1| Histidyl tRNA synthetase (Histidine tRNAligase) (HisRS) [Mycoplasma
           agalactiae PG2]
          Length = 443

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 95/470 (20%), Positives = 173/470 (36%), Gaps = 55/470 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
               +G  D  + +I IRN ILD   ++ E   F+ IETP+LE +D   + +   D  NK
Sbjct: 2   FNRVKGTKDYESNDIEIRNEILDEFLHLAEVNCFNLIETPILESADLYKRSVAGSDIVNK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDT------IVFPCRTYRIGPVFRNEKHGP 122
            ++   D   + +SLR + TA   R + EN              +    GP+FR E+   
Sbjct: 62  EMYEFTDKGDRKLSLRPEGTAGFIRALIENKWYVTNEEFWPTTTKFVYYGPMFRYEQPQK 121

Query: 123 GRFRQFIQCDVDNVGSS----AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           GR RQF Q   + + S         DAE+  M ++ L  + +        I + K  +  
Sbjct: 122 GRMRQFYQAGAEIIDSKSSELNAFQDAELIQMASNLLSELNVNFVLKINSIGDNKSREKY 181

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E +  + ++            D+L +   + +K  +     D             +   
Sbjct: 182 QEDLRKYLEN----------YKDELTEISQERLKNNVFRILDDKIDSQKPFM----KNAP 227

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++  +LS + E+   +   L+                              ++  ++VRG
Sbjct: 228 VLRDYLSSESEEHFKKTLHLLD-----------------------ILGIEYEVDHSLVRG 264

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YY   VYE +                ++ GGGRY  LV    G ++ A G+ +GI RL
Sbjct: 265 LDYYDEVVYEFMSLDKNA------GAQATIIGGGRYSNLVKDLGGPDLRAAGWGLGIDRL 318

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I  LK  +    +      + +      ++   +       LR   +        +KN  
Sbjct: 319 IDLLKLQKGEEYSELVEQNIDVLIGTSSNECKEELFAIASYLRGLDLNTHFVYELAKN-K 377

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              + A +      +I    +       IKD    K++  + K+ +++ +
Sbjct: 378 KIYEKAQKIKARF-LILNDEKALNNYCFIKDFETNKKIKFDPKDLDNFEK 426


>gi|260903844|ref|ZP_05912166.1| histidyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 444

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 129/484 (26%), Positives = 200/484 (41%), Gaps = 53/484 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +L      GF +    E  I   I+D + + +  +G+  +    +E    L K  
Sbjct: 1   MAKSARL-----SGFPERLPAERVIEKSIIDILDHTFALHGYSALNHRAVEPISQLAKDG 55

Query: 61  PDEDRPNKGVF---SLQDDDGQW--ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
                 +K +F    L  +  +   + L +DLT PLAR++A+N + + FP +  RI PV+
Sbjct: 56  E----IDKEIFAVSRLHSEGTERNPLGLHFDLTVPLARFIADNANELSFPFKAARIQPVW 111

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM--MADTLEAVGIK-RNDYHIGINNR 172
           R E+   GR+R+FIQ D+D +  +      E+ +   +AD    +         I +N+R
Sbjct: 112 RGERPQQGRYREFIQADIDVIAEAELPGHFEVEIPLAVADAFSRLAPLGVPGVKIVVNDR 171

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV-KLLLGEGRTDNSGDFTKGAN 231
           ++L+G    IGL           VLR +DK DK G   V KLL  E   D        A 
Sbjct: 172 RLLEGFARGIGLTN------IQAVLRCLDKYDKIGPAEVGKLLATEAEADEEQQRLCLA- 224

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
                    ++ +  D      E+  L       E+G + L  +             +  
Sbjct: 225 ---------LAAIESDSPDFADEVRALGVEHPLLEEGLDSLTTMLR--AAHERAPGVVVA 273

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
              I RGL+YYTG VYE  L              GSV  GGRYD LV+  K ++ P  G 
Sbjct: 274 QLKIARGLDYYTGAVYETQLIG--------HEELGSVASGGRYDSLVTVGK-KSYPGVGM 324

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG+SRL+  +    S     +    V +     D D   +       LR   I  E+  
Sbjct: 325 SIGVSRLMAFILDANSGIKATRGTPSV-VVVAVTDEDKRGEADAVATALRARDIACEVSP 383

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQ-GTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ++K FG Q++YA+RR  P      G          IKD+  G++++ +    E     R
Sbjct: 384 SAAK-FGKQIRYAERRGIPFVWFTDGESGHE-----IKDIRSGEQVTADPATWEPVEADR 437

Query: 471 VAQI 474
             ++
Sbjct: 438 KPRV 441


>gi|323142449|ref|ZP_08077269.1| ATP phosphoribosyltransferase, regulatory subunit
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413026|gb|EFY03925.1| ATP phosphoribosyltransferase, regulatory subunit
           [Phascolarctobacterium sp. YIT 12067]
          Length = 389

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 99/425 (23%), Positives = 178/425 (41%), Gaps = 53/425 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            ++P G  D    E++ R  I ++I N+++ +G+D ++TP  EY D+ G         +K
Sbjct: 6   YQVPYGTKDILPGEMKTRRGIENAIINVFDKWGYDEVKTPDFEYVDTFGAAG------SK 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           G F   D     ++LR D+TAP+AR  A          R   +  ++R E+   GR  +F
Sbjct: 60  GDFRFFDRSNNLLALRNDMTAPIARLTATRLQGGEKIKRLCYLANLYRYEEIQAGRQCEF 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G+S   ADAE+ ++ A+ L+A G+++    +         G ++ I    ++
Sbjct: 120 EQAGVEMLGASGAAADAEVIVLAAEALQAAGLQKFAISL---------GHVDFINGLAEE 170

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              +   + +  D L +    G++ +                N+  E   +   FL +  
Sbjct: 171 AGFDAAQLQQLKDYLRRHDAVGMQQMADAME-----------NIRPEIKQLFADFLFLQG 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              + +    +      +   N+L  I +LV   G  +  +     + R L+YYTG ++E
Sbjct: 220 GIELLDKVAAIVTNAKCQGALNDLRKIYKLVDAYG-AAGYLSFDLGLYRSLDYYTGMLFE 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             L                V GGGRYD ++ RF     PATGF++G+ R+++AL+    +
Sbjct: 279 VYLPEMGY----------PVAGGGRYDKMMQRFG-LECPATGFAVGVDRVLLALERNGVA 327

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
           TNN           +      L +       LR  G   ++   +          AD + 
Sbjct: 328 TNN-----RTWDVLVTWSEGKLPEAIAKATALRREGRSVKLLTEA----------ADLQG 372

Query: 429 CPLAI 433
             LA+
Sbjct: 373 AALAV 377


>gi|309790360|ref|ZP_07684926.1| histidyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308227626|gb|EFO81288.1| histidyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 478

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 106/505 (20%), Positives = 172/505 (34%), Gaps = 83/505 (16%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  RG  D    E R   ++  S+    + +G+  ++ P+LE  +   + L +E     
Sbjct: 5   IEAVRGMRDVLPDEQRRLVQVRRSLEQTLDRHGYRMLDLPVLEQRELYLRKLGEELVGKV 64

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             F+      + ++LR + TA + R    +      P R    GPVFR E+      RQF
Sbjct: 65  YEFNF---GERHLALRPEWTASVLRAYITHMQDHPLPLRLAYAGPVFRYEQPQTEATRQF 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ VG +A  ADAE+  +    LEA G++  +Y + + +  ++  +L  +GL    
Sbjct: 122 TQVGVELVGCAAPRADAEVLALACAGLEAAGVR--NYRLVVGHIGMIREVLAGLGLEERT 179

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +      + R    L   GL  V+  + E  +         A L  EQ    +  +   +
Sbjct: 180 QGILAWSMER----LRSEGLAAVRERISETISSPPEGMALPAGLDDEQAAAWLLHMLDAM 235

Query: 249 EKSMH------------------------------------------------ELYELVK 260
           +  +                                                 ++  L+ 
Sbjct: 236 QIDLRTGTRSPQEVIQRLLRKLRRGDPQPAIDRALELLVRLVELHGPPALVLPQISALLT 295

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                    NEL  I  L+   G +  RI I   + RGL YYTG ++E            
Sbjct: 296 EYNLISPAANELETILTLLTAHGIDQERIVIDLGLGRGLHYYTGLIFEIYDADAQH---- 351

Query: 321 KPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
                  +GGGGRYD LV      Q+ PA GFS         L+ +              
Sbjct: 352 -------LGGGGRYDDLVQTLGGDQSTPAVGFSY-------VLERITRVAQIAATAPAPR 397

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I     ++ +          LR  G  A M +G   +       A  R      + G  +
Sbjct: 398 ILVAAQEAITYPLAIEVAHQLRQQGFVAIMDVGVPGDVSPA--TARLRGADYLALVGDAD 455

Query: 440 RSRGMLQIKDLAKGKELSREIKNNE 464
                    DL  G++  R I   +
Sbjct: 456 L-----VWHDLKTGQQQQRRITELD 475


>gi|295104664|emb|CBL02208.1| histidyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 413

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 175/429 (40%), Gaps = 55/429 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ +  +G  D    E  +R+ I   I   Y + GF+ I TP+LE  ++L K     D  
Sbjct: 1   MKTQALKGMRDLLPAEQTLRDYIQGKILETYRSAGFERISTPMLEDMENLDKS-EGGDNL 59

Query: 67  NKGVFSLQDDDGQ--------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           N  +F +     +               + LRYDLT PL+RY A N D +  P +  +  
Sbjct: 60  N-LIFKVLKRGDKLTAALNTGDPKQLSDMGLRYDLTLPLSRYYAANKDKLPNPFKVIQTD 118

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            VFR E+   GR R+F+QCD+D +G ++  A+ E+  +    L  +G     + + IN+R
Sbjct: 119 RVFRAERPQKGRLREFVQCDIDILGDASPNAEVELIDVTTRALLNIGFTG--FTVNINDR 176

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           +IL G+LE +G   D        V    DK+DK G +GVK  L E +            L
Sbjct: 177 RILRGMLESMGFAADTL----DSVCITFDKMDKIGAEGVKAELTEKQ------------L 220

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
               I  +  F++   + ++  +              N+L  +            ++   
Sbjct: 221 PENAIHALADFIAA-GDVTLDAVAARCADPAIA----NDLKYVLATANTLAAGRYQVAYC 275

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            ++VRG  YYTG V+E             P   G+V GGGRYD +V +F G  VPA GFS
Sbjct: 276 PSLVRGQGYYTGMVFEVT----------CPQFSGAVAGGGRYDNMVGKFLGVQVPAVGFS 325

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG  R+   L          K+     I  +                LR       +   
Sbjct: 326 IGFERVCGILLEQGYQIPGAKQ----KIALLYGKDTDFPAVLSKAAALREQ-YNVTVLP- 379

Query: 413 SSKNFGNQL 421
             K  G QL
Sbjct: 380 QGKKLGKQL 388


>gi|291320376|ref|YP_003515639.1| Histidyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752710|emb|CBH40684.1| Histidyl tRNA synthetase (Histidine tRNAligase) (HisRS) [Mycoplasma
           agalactiae]
          Length = 443

 Score =  160 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 98/469 (20%), Positives = 179/469 (38%), Gaps = 61/469 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G  D  + +I IRN ILD+  ++ E   F+ IETP+LE +D   + +   D  NK ++ 
Sbjct: 6   KGTKDYESNDIEIRNEILDAFLHLAEVNCFNLIETPILESADLYKRSVAGSDIVNKEMYE 65

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDT------IVFPCRTYRIGPVFRNEKHGPGRFR 126
             D   + +SLR + TA   R + EN              +    GP+FR E+   GR R
Sbjct: 66  FTDKGDRKLSLRPEGTAGFIRALIENKWYVTNEEFWPTTTKFVYYGPMFRYEQPQKGRMR 125

Query: 127 QFIQCDVDNVGSS----AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           QF Q   + + S         DAE+  M ++ L  + +        I + K  +   E +
Sbjct: 126 QFYQAGAEIIDSKSSKLNAFQDAELIQMASNLLSELNVNFVLKINSIGDNKSREKYQEDL 185

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKL---LLGEGRTDNSGDFTKGANLTSEQIDI 239
             + ++            D+L +   + +K     + + + D+   F K A +       
Sbjct: 186 RKYLEN----------YKDELTEISQERLKNNVFRILDDKVDSQKPFMKNAPV------- 228

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +LS + E+   +   L+                            + ++  ++VRGL
Sbjct: 229 LRDYLSSESEEHFKKTLHLLD-----------------------ILGIKYEVDHSLVRGL 265

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY   VYE +                ++ GGGRY  LV    G ++ A G+ +GI RLI
Sbjct: 266 DYYDEVVYEFMSLDKNA------GSQATIIGGGRYSNLVKDLGGPDLRAAGWGLGIDRLI 319

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             LK  +    +      + +      ++   +       LR   +        +KN   
Sbjct: 320 DLLKLQKGEEYSELVEQNIDVLIGTSSNECKEELFAIASYLRGLDLNTHFVYELAKN-KK 378

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
             + A +      +I    +       IKD    K++    K+ +++ +
Sbjct: 379 IYEKAQKIKARF-LILNDEKDPNNHCFIKDFETNKKIKFNPKSLDNFEK 426


>gi|154482912|ref|ZP_02025360.1| hypothetical protein EUBVEN_00609 [Eubacterium ventriosum ATCC
           27560]
 gi|149736196|gb|EDM52082.1| hypothetical protein EUBVEN_00609 [Eubacterium ventriosum ATCC
           27560]
          Length = 405

 Score =  160 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 77/405 (19%), Positives = 160/405 (39%), Gaps = 40/405 (9%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+    P G  D   KE  ++  I +SI  ++  YG+  I+TP  E+ D   K      
Sbjct: 6   EKVLLHTPEGVRDVYGKECAVKLTIENSINKVFNIYGYHNIQTPTFEFFDIFSK--ERGS 63

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K ++   D +G  + LR D+T  +AR VA+ +  +  P +       + N     G+
Sbjct: 64  VASKNLYKFFDREGNTLVLRPDVTPSIARLVAKYYMDVKVPVKLCYNANTYINNSELQGK 123

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            ++  Q   + +   +  ADAE+  ++ D+L+A G+K  ++ + I +     G+LE+ G 
Sbjct: 124 LKENTQLGCELINDDSVEADAEILALVVDSLKAAGLK--EFLVEIGHADFYKGLLEECGF 181

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +++                   Q ++  +         +     N+T +  +  +   
Sbjct: 182 DTENE-------------------QELRKRIENKNYFGVEEILDNNNITGQLKEAFLKLP 222

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +     + +  + +       +    L  +  ++   G +   I     ++    YYTG
Sbjct: 223 ELFGSIDVIKSAKELTDNKKALQSIERLEKLYSILEDYGVSK-YISFDLGMISNFNYYTG 281

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +++A                  +  GGRYD L+ +F  +   A GF++ + ++++A+  
Sbjct: 282 IIFKAYT----------YGSGDQIVAGGRYDKLLGQFG-KEAAAVGFAVYMDQILLAVNG 330

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                NN           + +DS+        T  LR  G++ E+
Sbjct: 331 QRLKENNDYSYE-----VIIYDSEFRKAALSLTNALRDQGVKTEL 370


>gi|289578999|ref|YP_003477626.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter italicus Ab9]
 gi|289528712|gb|ADD03064.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter italicus Ab9]
          Length = 380

 Score =  160 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 79/408 (19%), Positives = 168/408 (41%), Gaps = 44/408 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             LP G  D   +E + + +I +  R I+  +G+  I  P  EYSD+      +      
Sbjct: 2   IYLPDGVQDFLPEEYKFKRKIEEKFREIFIRFGYQEIMPPTFEYSDNFSVLFDEN----- 56

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D  G  ++LR D+T  +AR V+       FP +   +  V+R +    G+ R+F
Sbjct: 57  NLYRFFDKKGNILALRPDVTTQIARIVST-KLKGSFPLKLCYVANVYRYDDPQVGKMREF 115

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G++ E +DAE+  +  + L++VG    D+ + +   +    ++E + L  ++
Sbjct: 116 TQAGIELIGTNHEESDAEIIAVAIEALKSVG--IEDFKVDVGQVEFFKRLVEDLELQNEE 173

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                              +  ++  L +    +  +F K   +  ++ + +     +  
Sbjct: 174 -------------------INLLREFLQQKNQSSIEEFIKDKGIRGKKAEFLSELPLLFG 214

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  + +  T    +  + L  + ++++  G     I     +V+ L YYTG ++ 
Sbjct: 215 GEEVLKRAKELYDTPKLGETIDYLERVYKILKDFGM-EEYISFDLGMVQNLNYYTGIIFR 273

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +            +  ++  GGRYDGL+  F    +PATGF+I + R ++AL+  +  
Sbjct: 274 CFV----------KGIGYAICTGGRYDGLLGIFGEH-IPATGFAISVERSMLALQKQKK- 321

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                 +       + +  +  S       +LR  G   EM+      
Sbjct: 322 ----DTIDKSWRVLIKYKENLRSNAYKKATLLRDEGKIVEMYSYEKAK 365


>gi|77917818|ref|YP_355633.1| ATP phosphoribosyltransferase regulatory subunit [Pelobacter
           carbinolicus DSM 2380]
 gi|109892438|sp|Q3A829|HISZ_PELCD RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|77543901|gb|ABA87463.1| histidyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 428

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 95/462 (20%), Positives = 176/462 (38%), Gaps = 46/462 (9%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  K T   A LPRG  D    +      +  S+++++  + F PI  P LEY D L + 
Sbjct: 1   MNRKITVPEAMLPRGVKDFLPNKAAKLEYLKQSLKDVFHRWAFRPIMPPTLEYLDVLERG 60

Query: 60  LPDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           L    R     F   D  +G+ ++   D+T  +AR VA        P R    G V R+ 
Sbjct: 61  LGAGLRDK--TFRFDDRQNGKLVAFCPDITPQVARIVATRMKGAPLPQRLCYNGKVLRHT 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           +   G+ R+ IQ  V+ +G     ADAEM  M  + L+++G    ++ + I   +   G+
Sbjct: 119 EQQAGKDREIIQSGVELIGLQGPEADAEMIAMAIECLQSLGAT--EFTVDIGQVEFFHGV 176

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           ++ + L     L                    V+  +         +     +L   +  
Sbjct: 177 MDGLNLPAPQAL-------------------AVQQAIARKDASGLSELLSELSLDDRKYA 217

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +++   +   + + +    +       +    L  I  ++   G     +      +RG
Sbjct: 218 EVMALPRLFGGREVLDRAADIVVNDRSRRALENLRQILAVLEAYGV-EEHVTFDLGELRG 276

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L Y+TG  ++  L            +  +V  GGRYD L +R+   + PATGF+  +  L
Sbjct: 277 LGYHTGVTFQGFLS----------GMGTAVCSGGRYDTLTARYGM-DAPATGFAFNLLNL 325

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           ++AL      T     + P  +  +    D  +  Q   + LR  G      +   ++  
Sbjct: 326 LMALD----RTLESAAVQPFDVMILQSGPDKRA-AQSLARALRDQGYACARDIIE-RSLQ 379

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           + L Y  + +    ++        G +++  LA G E +  +
Sbjct: 380 DSLDYGRKMHFRHVMVVADQ---AGDVRLIRLADGSEQTISL 418


>gi|238916955|ref|YP_002930472.1| histidyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238872315|gb|ACR72025.1| histidyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 426

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 95/465 (20%), Positives = 177/465 (38%), Gaps = 46/465 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K        P G  D  + E   +  I + + ++  +YG++ I+TP +E+ D   K  
Sbjct: 1   MKKDL---LHTPEGVRDIYSTECAEKKVIENRLHDVCASYGYNDIQTPSIEFFDVFNK-- 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN-EK 119
                P+  +F L D  G  + LR D+T  +AR  A+ F+  V P +   +G  F N  K
Sbjct: 56  ERGSVPSNEMFKLFDRYGNTLVLRPDMTPSIARATAKYFEDRVLPVKLCYLGNTFVNVSK 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
           +  GR ++      + +  ++  AD E+  M+ D + + G+      +   N    +G+L
Sbjct: 116 YYQGRLKENTMLGAELINDNSLAADYEIISMVIDCMLSAGLTEFQVEL--GNVAFFNGLL 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            K G+ GD                     + +  L+ +       +     N+       
Sbjct: 174 HKAGITGD-------------------SAEELLRLIKDKNYFGVEELLDSLNIDDAVAKA 214

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++    +     + E  + +       +  + L  + EL++ + Y+   I      +   
Sbjct: 215 LLELPQLFGGTEVLEKAKSLTDEEECIQAVSRLEELYELLKNNNYDK-YISFDLGDLSEH 273

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            YYTG ++ A                  V  GGRYD L+ +F   +  + GFSI I RLI
Sbjct: 274 AYYTGIIFHAYTF----------GTGEPVVNGGRYDKLLGQFGC-DKASIGFSITIDRLI 322

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EMFLGSSKNFG 418
            AL        +           + +++D LS     ++ LR+ G+    +    SK+  
Sbjct: 323 AALNRQNIHIPHDANGT-----LLVYNADRLSDAINVSKKLRSTGVNVCMIEYKDSKSDS 377

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             ++YA   +            S   +++ D   GK     +K+ 
Sbjct: 378 QYIEYAKESSLVNVAFIDDEYTSDSTIRVID-ESGKNERAAVKSL 421


>gi|325922597|ref|ZP_08184349.1| histidyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325546921|gb|EGD18023.1| histidyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 379

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 111/367 (30%), Positives = 175/367 (47%), Gaps = 30/367 (8%)

Query: 82  SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
           +LR+DLT PLARYVAE+   + FP R Y++  V+R E+   GRFR+F QCD+D +G  A 
Sbjct: 1   ALRFDLTVPLARYVAEHEHELSFPFRRYQMQRVYRGERAQRGRFREFYQCDIDVIGKDAL 60

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
           +   +  ++         +   D+ + +NNRK+L G  E +G+   +    +L VLR +D
Sbjct: 61  SIRYDAEVLAVIHAVFAELGIGDFKVQLNNRKLLRGFFESLGVAEGE---LQLAVLREVD 117

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL--- 258
           K+DK G   V+  L            +G  + +EQ+D +++F+++        L +L   
Sbjct: 118 KIDKRGADYVRDTL----------VGEGFGIAAEQVDKILAFVAVRSNGHADALAQLQAL 167

Query: 259 ---VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              V  +    +G  EL  + ELV+  G   +   ++ +I RGL+YYTG VYE  L    
Sbjct: 168 DASVGASATLGEGIAELREVLELVKALGVPESAYCLNFSIARGLDYYTGTVYETTLTD-- 225

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
                     GS+  GGRY+ L S +    +P  G SIG++RL   L+         +  
Sbjct: 226 ------HPQIGSICSGGRYESLASHYTKSKLPGVGISIGLTRLFWQLREAGLIQGIAESS 279

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
              ++  M  D   L       + LR  GI  E+ +   K  G Q +YA R      ++ 
Sbjct: 280 VHAMVALM--DESRLGDALDIARRLRIGGINTEVQM-EPKKIGKQFQYAARAGIRFVVLA 336

Query: 436 GTGERSR 442
           G  E +R
Sbjct: 337 GDDELAR 343


>gi|222053946|ref|YP_002536308.1| histidyl-tRNA synthetase 2 [Geobacter sp. FRC-32]
 gi|254801984|sp|B9M1R1|HISZ_GEOSF RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|221563235|gb|ACM19207.1| histidyl-tRNA synthetase 2 [Geobacter sp. FRC-32]
          Length = 434

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 96/463 (20%), Positives = 176/463 (38%), Gaps = 53/463 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M   + + A LP+G  D   ++      I   I  I+E +GF  I TPLLE+ D +   +
Sbjct: 1   MTIPSSIEAPLPKGVTDFLPEKADEIACIEGCISRIFELWGFRRIITPLLEFQDVISLGM 60

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            ++    +  F   D   G+ +++  D+T  +AR VA        P R Y  G V R+ +
Sbjct: 61  GED--LKEKTFRFDDRQTGRLLAIPPDITPQIARIVATRMLGYPLPLRIYYNGRVLRHAE 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR R+  Q  V+ +G ++  ADAEM  M  + L ++G+  +++ I +       GI+
Sbjct: 119 VQSGRSREIFQSGVELIGLNSPEADAEMVAMAVEALRSLGL--DNFKIDLGQVDFFRGIM 176

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                                  L       ++  + +  +    +  +   +T +  + 
Sbjct: 177 -------------------LSSGLSASARNLLQSAIAKKDSSAVREILEKEPITDQAKEE 217

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +     +   + +  L E   G    +K    +  + E++   G  S+ + I    +RGL
Sbjct: 218 IAVLPRLFGGREVLALAEKAAGNDRSKKALENITEVLEILDIYGV-SDFLTIDLGEIRGL 276

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +Y++G  +E  +G           +  +V GGGRYD L +++          +     ++
Sbjct: 277 DYHSGLTFEGFVG----------GLGEAVCGGGRYDALTAKYGR----PAPATGFAFNIL 322

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             LK LE             +     +     +     Q LR  G      +   ++F N
Sbjct: 323 ALLKVLEKQPEMEATRTRDFLLFNLKED--RREALEIAQNLRDKGFTTARDIIR-RDFDN 379

Query: 420 QLKYADRRNCPLAIIQG-----TGER------SRGMLQIKDLA 451
            L YA R N    ++ G       E        R  + IK + 
Sbjct: 380 SLAYAKRMNIRQMLVIGGNYCAEDEIYLVRVADRKGVAIKKMD 422


>gi|78224450|ref|YP_386197.1| ATP phosphoribosyltransferase regulatory subunit [Geobacter
           metallireducens GS-15]
 gi|109892210|sp|Q39QK2|HISZ_GEOMG RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|78195705|gb|ABB33472.1| histidyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 434

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 89/439 (20%), Positives = 172/439 (39%), Gaps = 42/439 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     + A LP+G  D   ++      I   IR ++E +GF  I TPLLE+ D +   L
Sbjct: 1   MTNPAPIEAPLPKGVTDFLPEKADKIGYIEGKIRRVFELWGFRRIITPLLEFQDVMAAGL 60

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            ++    +  F   D   G+ +++  D+T  +AR VA        P R Y IG V R+ +
Sbjct: 61  GED--LKERTFRFDDRQTGKLLAIPSDITPQVARIVATRMRGCPLPHRLYYIGRVLRHVE 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR R+  Q  V+ +G  +  ADAEM  M  + L+ +G    ++ + + +   + G++
Sbjct: 119 LQSGRSRETFQAGVELIGLDSPEADAEMVAMAVEILKGLGF--EEFKVDLGHTGFIRGVM 176

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
              GL GD +                     ++  +G+  +       +   +     + 
Sbjct: 177 AASGLGGDARRR-------------------LQEAVGKKDSSAVRAILETEPVADRIKEE 217

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + +   +   + +      V  + +  +  + +  + +++   G  S+ + +    +RGL
Sbjct: 218 LAALPRLFGGREVLAEAARVATSDSSRRALDNIAQVLDILDIHGV-SDHLTLDLGEIRGL 276

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +Y++G  +E  +            +  +V  GGRYD L  R+          +     ++
Sbjct: 277 DYHSGLTFEGFVT----------GIGEAVCSGGRYDNLTQRYGY----PAPATGFAFNIL 322

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L +LE   +        L+     D     +     Q LR  G      +   ++F +
Sbjct: 323 ALLNALEKRPDVEASKTRDLLIFNLKDD--RREALEIAQHLRALGYSTARDII-HRDFND 379

Query: 420 QLKYADRRNCPLAIIQGTG 438
            L YA R N    ++ G  
Sbjct: 380 SLDYARRMNILRMMVIGGD 398


>gi|307265288|ref|ZP_07546846.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919732|gb|EFN49948.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 380

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 77/408 (18%), Positives = 168/408 (41%), Gaps = 44/408 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             LP G  D   +E R++ +I +  R ++  +G+  I  P  EYSD+      +      
Sbjct: 2   IYLPDGVQDFLPEEYRVKRKIEEKFREVFIKFGYQEIMPPTFEYSDNFSVLFDEN----- 56

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D  G  ++LR D+T  +AR V+       FP +   +  V+R +    G+ R+F
Sbjct: 57  NLYRFFDKKGNILALRPDVTTQIARIVST-KLKGSFPLKLCYVANVYRYDDPQVGKMREF 115

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G++ E +DAE+  +  + L+++G    D+ + +   +    ++E + L  ++
Sbjct: 116 TQAGIELIGTNHEESDAEIIAVAIEALKSIG--IEDFKVDVGQVEFFKRVVEDLELQNEE 173

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                              +  ++  L +       +F +   +  ++ + +     +  
Sbjct: 174 -------------------INLLREFLQQKNQSAIEEFIEDKGIRGKKAEFLSELPLLFG 214

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  + +  T    +  + L  + ++++  G     I     +V+ L YYTG ++ 
Sbjct: 215 GEEVLKRAKELYDTPKLGETIDYLERVYKILKDFGM-EEYISFDLGMVQNLNYYTGIIFR 273

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +            +  ++  GGRYDGL+  F    +PATGF+I + R ++AL+  +  
Sbjct: 274 CFV----------KGIGYAICTGGRYDGLLGIFGEH-IPATGFAISVERSMLALQKEKKD 322

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             +           + +  +  S       +LR  G   EM+      
Sbjct: 323 IIDKS-----WRVLIKYKENLRSNAYKKATLLRDEGKIVEMYSYEKAK 365


>gi|310829600|ref|YP_003961957.1| histidine--tRNA ligase [Eubacterium limosum KIST612]
 gi|308741334|gb|ADO38994.1| histidine--tRNA ligase [Eubacterium limosum KIST612]
          Length = 411

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 117/447 (26%), Positives = 198/447 (44%), Gaps = 55/447 (12%)

Query: 7   LRAELP-RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           + +  P RG  D   +E+ IR+++   I  IY ++GF  IETP LE  + L     D   
Sbjct: 1   MISSNPVRGARDILPREMLIRDQLEQQILEIYRSHGFSRIETPALENIELLL--GSDGGE 58

Query: 66  PNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
             K +F++     +              + LR+DLT PL+R+ + N   +  P +  +IG
Sbjct: 59  NLKMLFTVLKRGDKLKVHEESTVSDLCDMGLRFDLTLPLSRFYSNNAGELETPFKAIQIG 118

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            VFR E+   GR+R F QCD+D +G    +A+ E+    +  L A+G +   + I +N+R
Sbjct: 119 NVFRAERPQKGRYRSFKQCDIDIIGDPTVSAEMELINTTSKALMAIGFEG--FTIKVNDR 176

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+L+  + K G   +D       V  ++DK DK G  GVK  L E   D +         
Sbjct: 177 KLLNAFIAKAGFKEEDA----GSVCISLDKADKIGADGVKKELIEKGYDEA--------- 223

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
                 I+ +F+      ++  + E V       +   +L  + E          ++   
Sbjct: 224 ------IVGAFVDEAATITLDNIGEKVDEP----EAVADLKKVIETSAALSGGRYQVVFD 273

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            T++RG+ YYTG ++E   G    +          + GGGRYD ++ ++   +VPA GFS
Sbjct: 274 FTLIRGMGYYTGQIFEVSYGPYGFS----------IAGGGRYDNMIGKYSKNSVPAVGFS 323

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG  R++  L   ++      +    L+   D   D++++   Y   LR  G    +   
Sbjct: 324 IGFERIVNILLEEQADKAVENKR---LLLFYDAGKDAMTEVIPYADKLRADGYTVNLV-A 379

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGE 439
             K FG Q+ Y + +     ++ G  E
Sbjct: 380 MKKKFGKQINYYEGKGYGGFMVFGRDE 406


>gi|282600694|ref|ZP_06257696.1| histidine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571428|gb|EFB76963.1| histidine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 433

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 121/429 (28%), Positives = 178/429 (41%), Gaps = 55/429 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ +  +G  D    E  +R+ I   I   Y   GF  I TP+LE  ++L K     D  
Sbjct: 19  MKTQPLKGMRDLLPHEQALRDYIQGQILATYRAAGFQRISTPILEDMENLDKSDG-GDNL 77

Query: 67  NKGVFSLQDDDGQ--------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           N  +F +     +               + LRYDLT PL+RY A N + +  P +  +  
Sbjct: 78  N-LIFKVLKRGDKLEKALATGDEKQLSDMGLRYDLTLPLSRYYAANRNELPTPFKVIQTD 136

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GR R+F+QCD+D +G S+  A+ E+  + A  L A+G     + + IN+R
Sbjct: 137 RVYRAERPQKGRLREFVQCDIDILGDSSPNAEVELIDVTARALLAIGFTG--FTVNINDR 194

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           +IL  +L+K+G    D       V  + DKLDK G  GVK  L E               
Sbjct: 195 RILRAMLQKMGFAAGDL----DSVCISFDKLDKIGADGVKAELTEK------------GF 238

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
            +E ++ +  FL            + V   +  E    +L  +     K       I  +
Sbjct: 239 AAEAVEALDEFLRAG-----DFSLDTVAAKVDDEALTADLRYVIATSEKIAAGRYGIAYA 293

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            ++VRG  YYTG V+E             P   G+V GGGRYD +V +F GQ VPA GFS
Sbjct: 294 PSLVRGQGYYTGMVFEVT----------CPQFSGAVAGGGRYDNMVGKFIGQQVPAVGFS 343

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG  R+   L          K    +L           +      Q LR A     +   
Sbjct: 344 IGFERVCGILLEQGYQIPGAKPRLALLYC----KDADFAAVLAKAQTLR-ADYDVTVLP- 397

Query: 413 SSKNFGNQL 421
            +K  G Q 
Sbjct: 398 QAKKLGKQF 406


>gi|213419470|ref|ZP_03352536.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 175

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 5/164 (3%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + +
Sbjct: 1   MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAI 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +  D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+
Sbjct: 57  GEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHER 116

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
              GR+RQF Q   +  G      DAE+ M+ A    A+GI  +
Sbjct: 117 PQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGISEH 160


>gi|297616800|ref|YP_003701959.1| histidyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144637|gb|ADI01394.1| histidyl-tRNA synthetase 2 [Syntrophothermus lipocalidus DSM 12680]
          Length = 386

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 177/408 (43%), Gaps = 46/408 (11%)

Query: 7   LRAE-LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           ++A+ +P GF D   +E +++  I     +++ ++G+  + TP +EY + +   + D + 
Sbjct: 1   MKAKEIPPGFKDHVPREAKLKRIIEKKAADLFASWGYQEVITPTVEYLEVIQ--VADMNV 58

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             + +F  Q+ DG+ ++LR D+T P+AR  +        P R +    VFR+     G++
Sbjct: 59  DQQELFLFQNRDGRLLALRPDMTIPIARMASTKLRKDPLPLRLFYRANVFRHSLSQHGKY 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  V+ +G+  E ADAE+  +  + +  +G+   ++ + +NN KI + +L K GL 
Sbjct: 119 NEFWQIGVEMLGAGGERADAEVIALAVELMTCLGV--EEFQLSLNNVKIFNQLLRKSGLA 176

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +D+                     +K L+               +L S+  +  +    
Sbjct: 177 HEDE-------------------NEIKRLVMNKDLVGLERKLSDLHLDSKLKETFIELPV 217

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           ++    + E             G  EL V+   +R  G   +R+ I   ++RGL+YYTG 
Sbjct: 218 LNGGLEILERLPDFSEWPEVMAGVEELKVLFRALRAFGV-EDRVVIDLGVLRGLDYYTGV 276

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E                   + GGGRYD ++ R+     PATGF++G+ R+++AL   
Sbjct: 277 VFEGYSSNLGY----------PLLGGGRYDNVMGRYGW-PNPATGFAVGVERVLLAL--- 322

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                ++             D   L+K     + LR  G    + +  
Sbjct: 323 ----GSMSAPTEPCCLVAGSD---LTKVAETARRLRKEGRVVCLDVHG 363


>gi|291545931|emb|CBL19039.1| ATP phosphoribosyltransferase regulatory subunit [Ruminococcus sp.
           SR1/5]
          Length = 373

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 146/400 (36%), Gaps = 40/400 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
               P G  D   +E   + R+   +  ++  YG++ IETP  EY +     +     P+
Sbjct: 4   IFHTPEGVRDIYGEECSRKKRLQRELHQVFSRYGYEDIETPGFEYFEVFSNEVG--TIPS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++   D +G  + LR D T  ++R  A  FD    P R    G  F N     G+ ++
Sbjct: 62  KDLYKFFDREGNTLVLRPDFTPSVSRACATYFDPEKGPVRLCYTGNTFINNSSYRGQMKE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q  V+++G  +  ADAE+  M  + L+A G+      + +        +L +  L  +
Sbjct: 122 NTQMGVEHMGDDSAAADAEILAMTVECLKAAGLTEFQ--VSVGQVDYYKSLLAEADLEPE 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +                   + ++ L+ +       +  KG NL             + 
Sbjct: 180 IE-------------------EHLRELISQKNYFGVEELLKGQNLGDNLSKAFTELPQMF 220

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
               + E  + +            L  I E+++  G     I     ++    YYTG ++
Sbjct: 221 GSAEVLEKAKKLTSNPEALSAVKRLEEIYEILKVYGC-EKYIAFDFGMLSKFRYYTGIIF 279

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +A                  +  GGRY+ L+  F  +   + GF+I +  L++AL   + 
Sbjct: 280 QAYT----------YGTGEPLIKGGRYNELMKHFG-KPASSIGFAIVVDNLMLALSRQKL 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +     +        + +D  +L K       LR  G + 
Sbjct: 329 TVPAGDKT-----IVITYDPGNLKKAIQEAMELRNKGKKV 363


>gi|218681114|ref|ZP_03529011.1| histidyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 189

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 116/185 (62%), Positives = 139/185 (75%), Gaps = 1/185 (0%)

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           L F V NEK + VVFGSVGGGGRYDGLVSRF GQ VPATGFSIG+SRL+ ALK+L     
Sbjct: 1   LTFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMTALKNLGK-LG 59

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + PVL+T MD D +++ +YQ  TQ LR AGIRAEMF G+ K FGNQLKYADRR CP
Sbjct: 60  AGAVIEPVLVTVMDGDVEAMGRYQKMTQQLRAAGIRAEMFQGNWKKFGNQLKYADRRGCP 119

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           +AIIQG  ER+ G++QIKDL +GK LS EI++N SWREARVAQ T+P ++LV  V++I  
Sbjct: 120 VAIIQGGDERATGVVQIKDLIEGKLLSGEIEDNASWREARVAQETVPEADLVGKVREIHA 179

Query: 491 ENKEE 495
              EE
Sbjct: 180 AQAEE 184


>gi|124809547|ref|XP_001348602.1| histidine --tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23497499|gb|AAN37041.1| histidine --tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 1132

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 103/554 (18%), Positives = 195/554 (35%), Gaps = 91/554 (16%)

Query: 3    KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
            K      +  +G  D   +++++RN   + I+  +  +G   I+TP+ E  ++L     +
Sbjct: 590  KNINFNLKTAKGCKDFTGEDMQLRNIFFEYIKKKFLLHGAVEIDTPIFELKETLMNKYGE 649

Query: 63   EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG- 121
            +   +K +F L+D  G+ +SLRYDLT PL R++  N    V   + + IG V+R ++   
Sbjct: 650  D---SKLIFDLKDQGGESLSLRYDLTVPLYRFINTNN---VSHLKRFHIGKVYRRDEPSM 703

Query: 122  -PGRFRQFIQCDVDNVGSSAE-TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GRFR+F QCD D VG       D  +  +  D L  +     ++   +N+RKIL+ +L
Sbjct: 704  NRGRFREFYQCDFDIVGKFDTLRTDFHILYIFWDILYNLRNVLGNFKCKLNHRKILEYML 763

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                +H D    +   V  +IDKLDK   Q  +  L   +  +     K     S+ + +
Sbjct: 764  LSCNIHKD----KVKTVSSSIDKLDKITFQQFRDELLNDKGIHIEAIDKIEQYISKTLSL 819

Query: 240  ----MVSFLSIDLEK----------------SMHELYELVKGTIAGEKGFNEL------- 272
                ++ FL  DL++                 + ++++L+K      +   +L       
Sbjct: 820  SPFLVIEFLRNDLKESTLNEEYKLEIQNCINHLEQIFDLLKHFNMLNQFSFDLSLARGLD 879

Query: 273  ----------------------------------VVISELVRKSGYNSNRIKISSTIVRG 298
                                                    V  S      I I+   +R 
Sbjct: 880  YYTGIIFEFVLLSETNVGSVAAGGRYDFLIRNKRREYLPSVGASIGIERIITIAEEFIRT 939

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
               +     E        N +    V          +   +    + +     +   +  
Sbjct: 940  KNLFCKTKDETTNKDNKNNHQNHVNVQ---IDENVQNKKKTNISNKEIKPKSSNNKNNSN 996

Query: 359  IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                 + E+S     +   V +   +   D   +       L    I  E      +   
Sbjct: 997  NSNNNNSENSNKLNMKDNAVDVLVCNIKKDCFKEIVELCTKLWENDISTEFTYVKDQKIQ 1056

Query: 419  NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
             QL YA  +  PL +I G  E  +G+++++                  ++    +  I I
Sbjct: 1057 KQLVYALEKQIPLVLIIG-DEIEQGIVKLR-------------EITLDKDKSTGEKEINI 1102

Query: 479  SELVSTVKKILQEN 492
            ++ +  +KK    N
Sbjct: 1103 NDCIQEIKKYFTHN 1116


>gi|238008128|gb|ACR35099.1| unknown [Zea mays]
          Length = 353

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/302 (23%), Positives = 137/302 (45%), Gaps = 25/302 (8%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            PRG  D P +++R+R  + D  R +     F+ ++ P+LE      +   +E    + +
Sbjct: 70  PPRGTRDFPPEDMRLRTWLFDQFREVSRLMAFEEVDFPVLESEALFIRKAGEE--ITQQL 127

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +D  G+ + LR ++T  LAR V +   ++  P + + IG  +R E+   GR R+  Q
Sbjct: 128 YNFEDKGGRRVVLRPEITPSLARLVIKQGKSVSLPLKWFTIGQCWRYERMTRGRRREHYQ 187

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
            ++D  G     A+AE+   +    + +GI  +D  I +++RK+L  +L    +      
Sbjct: 188 WNMDIFGVPKVRAEAELLHAIVLLFQRLGITSSDVGIRVSSRKVLQAVLNMYSIPE---- 243

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
           +    V   +DKL K   + ++  L                L+SE +  ++  LSI    
Sbjct: 244 HLFTQVCVIVDKLGKMTREEIEKELVST------------GLSSEAVQGIIDVLSIKSLS 291

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E+        +  +   +L  +     + GY ++ I   +++VRGL YYTG V+E  
Sbjct: 292 KLEEVL------GSDVEAVADLKKLFSFAEQYGY-ADWICFDASVVRGLAYYTGIVFEVA 344

Query: 311 LG 312
             
Sbjct: 345 FS 346


>gi|312862474|ref|ZP_07722717.1| putative histidine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311102117|gb|EFQ60317.1| putative histidine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 228

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 8/231 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    +      + +  R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPADSAKWQYVENVARETFKKYNYGEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYIGSMFRYERPQA 120

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GR R+F Q  V+  GS     D E   M       +GIK  D  + +N+    +  L   
Sbjct: 121 GRLREFHQLGVECFGSKNPATDVETIAMTYQLFNTLGIK--DVTLHLNSLGNTESRL-AY 177

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                D L      L   D   +     +++L  + +           +L 
Sbjct: 178 RQALIDYLTPMRESLS-KDSQRRLDENPLRVLDSKEKKIRLQLKMLHLSLI 227


>gi|297545207|ref|YP_003677509.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842982|gb|ADH61498.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 380

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 78/408 (19%), Positives = 168/408 (41%), Gaps = 44/408 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             LP G  D   +E + + +I +  R ++  +G+  I  P  EYSD+      +      
Sbjct: 2   IYLPDGVQDFLPEEYKFKRKIEEKFREVFIKFGYQEIMPPTFEYSDNFSVLFDEN----- 56

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D  G  ++LR D+T  +AR V+       FP +   +  V+R +    G+ R+F
Sbjct: 57  NLYRFFDKKGNILALRPDVTTQIARIVST-KLKGSFPLKLCYVANVYRYDDPQVGKMREF 115

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G++ E +DAE+  +  + L++VG    D+ + +   +    ++E + L  ++
Sbjct: 116 TQAGIELIGTNHEESDAEIIAVAIEALKSVG--IEDFKVDVGQVEFFKRVVEDLELQNEE 173

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                              +  ++  L +    +  +F K   +  ++ + +     +  
Sbjct: 174 -------------------INLLREFLQQKNQSSIEEFIKDKGIRGKKAEFLSELPLLFG 214

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  + +  T    +  + L  + ++++  G     I     +V+ L YYTG ++ 
Sbjct: 215 GEEVLKRAKELYDTPKLGETIDYLERVYKILKDFGM-EEYISFDLGMVQNLNYYTGIIFR 273

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +            +  ++  GGRYDGL+  F    +PATGF+I + R ++AL+  +  
Sbjct: 274 CFV----------KGIGYAICTGGRYDGLLGIFGEH-IPATGFAISVERSMLALQKQKKD 322

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             +           + +  +  S       +LR  G   EM+      
Sbjct: 323 IVDKS-----WRVLIKYKENLRSNAYKKATLLRDEGKIVEMYSYEKAK 365


>gi|332980861|ref|YP_004462302.1| histidyl-tRNA synthetase 2 [Mahella australiensis 50-1 BON]
 gi|332698539|gb|AEE95480.1| histidyl-tRNA synthetase 2 [Mahella australiensis 50-1 BON]
          Length = 394

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 98/426 (23%), Positives = 178/426 (41%), Gaps = 42/426 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +  +P G  D    E   +  +   +  ++  +G+  +ETP+ EY D        + R  
Sbjct: 5   KLHIPEGTQDYLIDECYNKEELEHKLNVLFHRWGYRSVETPIYEYYDVFSDS--SKYRHQ 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + +    D +G+  +LR D+T P+AR VA    +   P R    G VFR +    GR RQ
Sbjct: 63  EEILKFVDRNGRIAALRPDMTVPVARMVATKMASEPMPLRLCYCGDVFRYDDLQAGRQRQ 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+ VGS++  ADAE+  +    L+  G+  ++ HI I    +   I+E+ G+   
Sbjct: 123 FTQVGVELVGSTSVLADAELIALAITALKYAGL--DNPHIVIGQVGLFKSIIEESGVD-- 178

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                            +   Q +  L+ +            A++  +  +I++      
Sbjct: 179 -----------------QSYAQSISRLIDQKNIPALAALLDEADIDDDYKEILLGLPQWF 221

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
               + +  + +    A   G + +  I + + + G N + + +  +I+  L+YYTG V+
Sbjct: 222 GGVDILDKAKAMVKEPAIMAGLDNIYGIYDALARRGLN-DFVSVDLSIIPDLDYYTGMVF 280

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A +     +          + GGGRYD L++ F    +PATGF+IGI RL++AL+    
Sbjct: 281 NAFVTELGYS----------ICGGGRYDNLLANFG-TALPATGFAIGIKRLMLALERQGK 329

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                    P     + +D   + K       LR  G   ++   + ++ G+   YA  R
Sbjct: 330 L-----RPAPPCAYLIVYDESGMKKAFECATQLRRQGF--DVIAEAVEDVGDAAAYASER 382

Query: 428 NCPLAI 433
                +
Sbjct: 383 GIKNVL 388


>gi|134300198|ref|YP_001113694.1| histidine--tRNA ligase [Desulfotomaculum reducens MI-1]
 gi|226702200|sp|A4J716|HISZ_DESRM RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|134052898|gb|ABO50869.1| ATP phosphoribosyltransferase regulatory subunit [Desulfotomaculum
           reducens MI-1]
          Length = 401

 Score =  158 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 98/438 (22%), Positives = 168/438 (38%), Gaps = 44/438 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            L  G  D    E  +   + +    + E +G+  + TP  EY ++L      E+   + 
Sbjct: 8   RLAPGVRDVLPAEAHLMRGLKEKFTKLVETWGYKEVVTPTFEYMENLA----SEELQEEK 63

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
            F   D  G  ++LR D+T P+AR VA     I  P R + +  VF  E+   GR R+F 
Sbjct: 64  FFKFLDRQGHLMALRPDMTRPMARLVATRMKGITPPLRLFYLANVFNYEQPQVGRQREFY 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+ +G S+  ADAE+  M+A+ L   G+   D+ I I N  I  G+++++GL  +  
Sbjct: 124 QAGVELMGPSSPEADAEVVAMVAEYLMQTGL--ADFQISIGNVGIFHGLVKQLGLPKEVA 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              Q +K  LG        +       T E+    +  + +   
Sbjct: 182 -------------------QELKEALGNKDFVKVEEILGSHAATPEEARRTLDLIELRGG 222

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +    +          + L  +   +   G     I +   ++RGL+YYTG V+E 
Sbjct: 223 PEILDRAFGLAQPGPAADAIDNLRQLYWGLTCYGV-ERHITLDLGLLRGLDYYTGLVFEG 281

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                        V  G    GG     +    G  +PATGF++ + R++VAL+ L+   
Sbjct: 282 YT-----------VAMGFPICGGGRYNQLLAKFGLPMPATGFAVNLERVLVALERLQGPP 330

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                  PV    +  + +SL+      + LR  G++    +        +   A     
Sbjct: 331 RE-----PVPDVLVAWEDNSLANALQCVKELRYQGLKVVTAMFEYPPAKAK-AEARSLGA 384

Query: 430 PLAIIQGTGERSRGMLQI 447
              +I    E     L +
Sbjct: 385 SR-VIYFDKEGKSEELSL 401


>gi|256751545|ref|ZP_05492422.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749629|gb|EEU62656.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter ethanolicus CCSD1]
          Length = 380

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 77/408 (18%), Positives = 165/408 (40%), Gaps = 44/408 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             LP G  D   +E R++ +I +  R ++  +G+  I  P  EYSD+      +      
Sbjct: 2   IYLPDGVQDFLPEEYRVKRKIEEKFREVFIKFGYQEIMPPTFEYSDNFSVLFDEN----- 56

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D  G  ++LR D+T  +AR V+       FP +   +  V+R +    G+ R+F
Sbjct: 57  NLYRFFDKKGNILALRPDVTTQIARIVST-KLKGSFPLKLCYVANVYRYDDPQVGKMREF 115

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G++ E +DAE+  +  + L+++G    D+ + +   +    ++E + L  ++
Sbjct: 116 TQAGIELIGTNHEESDAEIITVAIEALKSIG--IEDFKVDVGQVEFFKRVVEDLELQNEE 173

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                              +  ++  L +       +F     +  ++   +     +  
Sbjct: 174 -------------------INLLREFLQQKNQSAIEEFINDKGIRGKKAKFLSELPLLFG 214

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  + +  T    +  + L  +  +++  G     I     +V+ L YYTG ++ 
Sbjct: 215 GEEVLKRAKELYDTPKLGETIDYLERVYRILKDFGM-EEYISFDLGMVQNLNYYTGIIFR 273

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +            +  ++  GGRYDGL+  F    +PATGF+I + R ++AL+  +  
Sbjct: 274 CFV----------KGIGYAICTGGRYDGLLGIFGEH-IPATGFAISVERSMLALQKQKKD 322

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             +           + +  +  S       +LR  G   EM+      
Sbjct: 323 IIDKS-----WRVLIKYKENLRSNAYKKATLLRGEGKIVEMYSYEKAK 365


>gi|220931066|ref|YP_002507974.1| histidyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254801985|sp|B8D110|HISZ_HALOH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|219992376|gb|ACL68979.1| histidyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 418

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 95/396 (23%), Positives = 176/396 (44%), Gaps = 41/396 (10%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           P G              I D I+ ++  + + PI TP LEY +SL   + +  +  K ++
Sbjct: 9   PGGMRSYLDSIAFQLEEIQDRIKGVFRQWAYRPIITPTLEYYESLTTGIGE--KYKKQMY 66

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
              D +G  ++LR ++TAP+AR VA   D +  P R     PVFR E+   G+ R+  Q 
Sbjct: 67  KFIDYEGNILALRPEMTAPIARTVANKIDELCLPQRLSYRAPVFRYEEPQTGKNREIYQI 126

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            V+ +G  +  ADAE+ M+  ++L++ G+   D+ I I +   L+G++E++ +       
Sbjct: 127 GVELIGEKSPGADAEVIMLAVESLKSSGLT--DFQIDIGHAGFLNGVIEELKVTDSQG-- 182

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
                            + +K  L +    +  DFT    + +  I+ ++  + +  +K 
Sbjct: 183 -----------------EQIKRWLNKKDMVSIRDFTSRVEIKN--INKLLGIVRLRGKKE 223

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           + +  + +      +K   +L ++ E +   G   N +    T++RG EYYTG V+EA  
Sbjct: 224 VLQRAKRLINNDKSKKALKDLELVYEYLCDYGV-DNYVNFDLTLIRGFEYYTGIVFEAFT 282

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                          ++ GGGRYD L+ ++ G+ +PA GF+IGI R+ + L +       
Sbjct: 283 ENLGY----------TICGGGRYDSLIYQYCGKEIPAIGFAIGIERVRLGLLNQGQELET 332

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            +    V+ +       +        +  R  G+  
Sbjct: 333 PEIDVMVVFSY-----QARKPALEAIKKYRKQGLNV 363


>gi|193216720|ref|YP_001999962.1| histidyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002043|gb|ACF07258.1| histidyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 417

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 98/460 (21%), Positives = 183/460 (39%), Gaps = 58/460 (12%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGVF 71
           +G  D   KE +I N I D+  +I + Y FD IETP++E  +   + + +  D   K ++
Sbjct: 6   KGTKDIYGKEAKIFNFIKDAFFDIAKKYNFDYIETPIIEDLNLFVRSVGETSDIVTKEMY 65

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           + +D   + I+LR + TA   R   EN    +   + +  GP+FR E+   GRFRQF Q 
Sbjct: 66  TFKDKGDRNIALRPEATASTIRAFVENRINNLSSSKLFYFGPMFRYERPQKGRFRQFNQG 125

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            ++ + + +   D E+  +  D L  + I      I         G +E    + +D   
Sbjct: 126 GIELIANKSILQDFEVIKLAIDFLTKIRITDFSLEINNL------GSIETRNQYINDLKK 179

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
                   + +L KF L+   L + + + +   DF K A         ++ +LS +  ++
Sbjct: 180 YFAKYQDELSELSKFRLEKNVLRILDDKEEQEKDFVKNA-------PKLLDYLSQEEREN 232

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                EL+                            +  I+  +VRG++YY   V+E + 
Sbjct: 233 FTSFTELLDKFE-----------------------IKYTINPFLVRGIDYYGDLVFEFVS 269

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               +  K       ++  GGRYDG+V  F+G  + + GF+ G+ RL   +    ++   
Sbjct: 270 TSKALGTK------STILAGGRYDGMVKSFEGPTIGSIGFAFGVDRLSEIIDFNLANYPE 323

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           + +   +LI  ++ D     +      +LR    R ++      +  +      + N   
Sbjct: 324 LNDQIDILIAYLNEDEKI--EILKAAYLLREE-FRVQIV-NEKCDIKDLFTLNFKLNPKY 379

Query: 432 AIIQGTGERSRGMLQIK--------DLAKGKELSREIKNN 463
            +     E     ++IK        +L   ++    I N 
Sbjct: 380 LVF---KELGANKIKIKTKNGEVLCNLKTIEDFKNAITNL 416


>gi|308190116|ref|YP_003923047.1| histidine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624858|gb|ADN69163.1| histidine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 437

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 84/431 (19%), Positives = 157/431 (36%), Gaps = 55/431 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
               +G  D   +E  +   I  +  N   NY F  IETP++E +    + +   D   K
Sbjct: 2   FNRIKGTRDFGPQENNVIELIRSAFVNYARNYNFHLIETPIIESATLYRRSVASSDIVKK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRFRQ 127
            ++  +D   + I+LR + TA   R + EN         +    GP+FR E+   GR+RQ
Sbjct: 62  EMYEFKDKGDRDIALRPEGTAGFVRALVENKWYATLKNTKFAYYGPMFRYEQPQKGRYRQ 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAV----GIKRNDYHIGINNRKILDGILEKIG 183
           F Q  ++ V +     +    ++ A +L        + + +       R      L+K  
Sbjct: 122 FNQAGMEIVDTVINPYNDAELIIAAASLLQCLDVKCVLKINSIGDEETRTRYQEELKKYF 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D+LN           +    L+   L + + + ++  DF        ++   +  +
Sbjct: 182 AKYKDQLN----------PISLERLENNVLRILDDKEESKKDFV-------KKAPKINKY 224

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS +  +  ++L  ++                        +N+ + ++  ++VRGL+YY 
Sbjct: 225 LSKNSTEFFNKLTSILD-----------------------FNNIKYQVDYSLVRGLDYYD 261

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             VYE +                ++ GGGRY  L+    G  + A GF  G+ R    + 
Sbjct: 262 EVVYEFVSTSKES------GSQSTIIGGGRYSNLIKELGGPQLYACGFGFGVDRAADIIN 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                 N+ ++   + I        +L      T  LR  G + E      K+       
Sbjct: 316 DENKDNNDAEK---INILVATTSEKNLDILFSLTNELRNYGSKIEFIKEVVKS-KKIFDK 371

Query: 424 ADRRNCPLAII 434
           A +    + I 
Sbjct: 372 AQKLQADVVIF 382


>gi|319777420|ref|YP_004137071.1| histidyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038495|gb|ADV34694.1| Histidyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 437

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 84/431 (19%), Positives = 156/431 (36%), Gaps = 55/431 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
               +G  D   +E  +   I  +  N   NY F  IETP++E +    + +   D   K
Sbjct: 2   FNRIKGTRDFGPQENNVIELIRSAFVNYARNYNFHLIETPIIESATLYRRSVASSDIVKK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGRFRQ 127
            ++  +D   + I+LR + TA   R + EN         +    GP+FR E+   GR+RQ
Sbjct: 62  EMYEFKDKGDRDIALRPEGTAGFVRALVENKWYATLKNTKFAYYGPMFRYEQPQKGRYRQ 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAV----GIKRNDYHIGINNRKILDGILEKIG 183
           F Q  ++ V +     +    ++ A +L        + + +       R      L+K  
Sbjct: 122 FNQAGMEIVDTVINPYNDAELIIAAASLLQCLDVKCVLKINSIGDEETRTRYQEELKKYF 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D+LN           +    L+   L + + + +   DF        ++   +  +
Sbjct: 182 AKYKDQLN----------PISLERLENNVLRILDDKEERQKDFV-------KKAPKINKY 224

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS +  +  ++L  ++                        +N+ + ++  ++VRGL+YY 
Sbjct: 225 LSKNSTEFFNKLTSILD-----------------------FNNIKYQVDYSLVRGLDYYD 261

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             VYE +                ++ GGGRY  L+    G  + A GF  G+ R    + 
Sbjct: 262 EVVYEFVSTSKES------GSQSTIIGGGRYSNLIKELGGPQLYACGFGFGVDRAADIIN 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                 N+ ++   + I        +L      T  LR  G + E      K+       
Sbjct: 316 DENKDNNDAEK---INILVATTSEKNLDILFSLTNELRNYGSKIEFIKEVVKS-KKIFDK 371

Query: 424 ADRRNCPLAII 434
           A +    + I 
Sbjct: 372 AQKLQADVVIF 382


>gi|253577783|ref|ZP_04855055.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850101|gb|EES78059.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 372

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 73/400 (18%), Positives = 152/400 (38%), Gaps = 40/400 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
               P G  D    E   + ++ + I  ++  YG++ IETP  EY +   + +     P+
Sbjct: 4   IFHTPEGVRDIYNGECSQKRKVQEKIHRVFHQYGYEDIETPTFEYFEVFSREVG--TIPS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++   D +G  + LR D T  ++R  A  F     P      G  F N     G  ++
Sbjct: 62  KELYKFFDREGNTLVLRPDFTPSVSRACATYFSPDKEPVSLCYTGNTFINNTSYRGHLKE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q  V+ +G  +  ADAE+  M  + L A G+      + +        +L++  L  +
Sbjct: 122 TTQMGVERIGDESADADAELLAMTVECLLAAGLTEFQ--VSVGQVDYFKSLLKEAELGPE 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +                   + +++L+ +  +    +F +   L             + 
Sbjct: 180 AE-------------------ERLRVLISQKNSFGVEEFVEEQKLKDSMQKAFTEIPQMF 220

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + +    +       +  + L  I E+++  GY    I     ++   +YYTG ++
Sbjct: 221 GSEEVLKKARSLTNNACALEAVSRLEEIYEIMKNYGY-EKYISFDFGMLSKYQYYTGIIF 279

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +A                  +  GGRY+GL+  F  +   + GF++ +  L++AL S + 
Sbjct: 280 QAYT----------YGTGEPMIKGGRYNGLMKHFG-KPAASIGFALEVDNLLLALSSQKL 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            +   ++        ++++  + ++     Q LR  G   
Sbjct: 329 ISEKEEKPE-----VIEYEPQNRTEAIKEAQKLRAEGRCV 363


>gi|238810326|dbj|BAH70116.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 454

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 85/434 (19%), Positives = 158/434 (36%), Gaps = 56/434 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           K+     +G  D   +E  +   I  +  N   NY F  IETP++E +    + +   D 
Sbjct: 17  KM-FNRIKGTRDFGPQENNVIELIRSAFVNYARNYNFHLIETPIIESATLYRRSVASSDI 75

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPGR 124
             K ++  +D   + I+LR + TA   R + EN         +    GP+FR E+   GR
Sbjct: 76  VKKEMYEFKDKGDRDIALRPEGTAGFVRALVENKWYATLKNTKFAYYGPMFRYEQPQKGR 135

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV----GIKRNDYHIGINNRKILDGILE 180
           +RQF Q  ++ V +     +    ++ A +L        + + +       R      L+
Sbjct: 136 YRQFNQAGMEIVDTVINPYNDAELIIAAASLLQCLDVKCVLKINSIGDEETRTRYQEELK 195

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K      D+LN           +    L+   L + + + +   DF        ++   +
Sbjct: 196 KYFAKYKDQLN----------PISLERLENNVLRILDDKEERQKDFV-------KKAPKI 238

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             +LS +  +  ++L  ++                        +N+ + ++  ++VRGL+
Sbjct: 239 NKYLSKNSTEFFNKLTSILD-----------------------FNNIKYQVDYSLVRGLD 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY   VYE +                ++ GGGRY  L+    G  + A GF  G+ R   
Sbjct: 276 YYDEVVYEFVSTSKES------GSQSTIIGGGRYSNLIKELGGPQLYACGFGFGVDRAAD 329

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +       N+ ++   + I        +L      T  LR  G + E      K+    
Sbjct: 330 IINDENKDNNDAEK---INILVATTSEKNLDILFSLTNELRNYGSKIEFIKEVVKS-KKI 385

Query: 421 LKYADRRNCPLAII 434
              A +    + I 
Sbjct: 386 FDKAQKLQADVVIF 399


>gi|295101537|emb|CBK99082.1| histidyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 413

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 114/429 (26%), Positives = 176/429 (41%), Gaps = 55/429 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ +  +G  D    E  +R+ I   I   Y   GF+ I TP+LE  ++L K     D  
Sbjct: 1   MKTQALKGMRDLLPNEQTLRDYIQGKILETYRASGFERISTPMLEDMENLDKSDG-GDNL 59

Query: 67  NKGVFSLQDDDGQ--------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           N  +F +     +               + LRYDLT PL+R+ A N D +  P +  +  
Sbjct: 60  N-LIFKVLKRGDKLTAALNSGDPKELSDMGLRYDLTLPLSRFYAANKDKLPHPFKVIQTD 118

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            VFR E+   GR R+F+QCD+D +G  +  A+ E+  +    L  +GI  + + + IN+R
Sbjct: 119 RVFRAERPQKGRLREFVQCDIDILGDESPNAEVELIDVTTRAL--LGIGFDGFTVNINDR 176

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           +IL G+LE +G   D        V    DK+DK G  GVK  L E +            L
Sbjct: 177 RILRGMLESMGFAADTL----DSVCITFDKMDKIGADGVKAELLEKQ------------L 220

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
               ++ +  F++   E ++  +              ++L  +            ++   
Sbjct: 221 PESAVNALADFIAA-GEVTLDAVAARCADPAIA----DDLKYVLAAANAMATGRYQVAYC 275

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            ++VRG  YYTG V+E             P   G+V GGGRYD +V +F G  VPA GFS
Sbjct: 276 PSLVRGQGYYTGMVFEIT----------CPQFSGAVAGGGRYDNMVGKFLGTQVPAVGFS 325

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG  R+   L          K+     I  +       +        LR       +   
Sbjct: 326 IGFERVCGILLEQGYQIPGAKQ----KIALLYGKDADFTAVLSKAAALRDT-YNVTVLP- 379

Query: 413 SSKNFGNQL 421
             K  G QL
Sbjct: 380 QGKKLGKQL 388


>gi|313904056|ref|ZP_07837436.1| histidyl-tRNA synthetase 2 [Eubacterium cellulosolvens 6]
 gi|313471205|gb|EFR66527.1| histidyl-tRNA synthetase 2 [Eubacterium cellulosolvens 6]
          Length = 445

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 78/407 (19%), Positives = 148/407 (36%), Gaps = 44/407 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K        P G  D   +E   +  +   I  +Y +YG+  IETP  E+ +     +
Sbjct: 1   MKK----LIHTPEGVRDIFGRECDKKRYLERQIEKLYRSYGYQSIETPAFEFFEVFASEV 56

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                P+K ++   D DG  ++LR D T  +A+ VA  F     P R    G V+RN   
Sbjct: 57  GTT--PSKDLYKFFDRDGNTLALRPDFTPAVAQAVAMYFSNEEMPLRFCYHGNVYRNNHA 114

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR ++  Q  V+ +   +  ADAE+  ++  T+   G+   ++ + I +    + +  
Sbjct: 115 YQGRLKESTQMGVEFLNDDSPEADAEIIALVVSTMRRSGLI--NFQVSIGHVDYFNALTA 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           + G+  D                    +  ++ LL       + +     N+ S+     
Sbjct: 173 EAGMDED-------------------TIAELRALLTIQNRFGAQELIDKLNMRSDLRKAF 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +  + ++ E  + +      +     L  I E+++  G  ++ +     +V    
Sbjct: 214 EELPELFGDTAVLERAKKLTTNETAKAAVERLQRIFEILKMHGC-ADYVTFDLGMVTEYS 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++A                 ++  GGRY+ L+  F  +   A GF+  I  L+ 
Sbjct: 273 YYTGIIFQAYT----------YGSGDALIKGGRYNRLLEHFG-KKAAAVGFATEIDPLLN 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           A++              VL                +    R  G+  
Sbjct: 322 AIERQRIQLPVKDIKTMVLYPV-----QMEQMAIRFAADQRMRGLDV 363


>gi|294155631|ref|YP_003560015.1| histidine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600149|gb|ADE19645.1| histidine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 478

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 96/487 (19%), Positives = 178/487 (36%), Gaps = 66/487 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
               +G  D   +  +I++ ++D    +   Y +  IETP+LE+SD   +     D  NK
Sbjct: 2   YSKVKGTIDYNQETFKIKHYLIDRFSLLVSRYDYQMIETPILEHSDIFKRSAESSDIVNK 61

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  +D   + + LR + TA   R   EN    +   +   +GP+FR E+   GRFRQF
Sbjct: 62  EMYEFKDKGDRDLVLRPEGTASFIRAYIENKWYALKNQKFSYVGPMFRYEQPQKGRFRQF 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN---DYHIGINNRKILDGILEKIGLH 185
            Q  V+ VG      D E+  +  D L ++ +K     +      +R   +  L K  + 
Sbjct: 122 YQAGVEFVGPKNPLKDLEVIKLAVDYLSSLNLKFKLVINSIGDNESRSKYENALRKYLIP 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             ++L+E          + +  L+G  L + + + D+   F        ++   + S+LS
Sbjct: 182 FKNELSE----------IGQKRLEGNVLRILDDKVDSVKPFM-------KKAPKISSYLS 224

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + +K   +L  L+       +  N+L                       VRGL+YY   
Sbjct: 225 DESKKYFLQLSNLLSDFNISFQLNNKL-----------------------VRGLDYYDEI 261

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK-- 363
           V+E +   P +          ++ GGGRY  L+  F G +  + GF +GI R++   +  
Sbjct: 262 VFEFVSTDPEV------GSQSTLIGGGRYSNLIKLFGGDDTSSVGFGLGIDRILPIKQRD 315

Query: 364 ---------SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
                      E       +    +      D +  +       +  + G+         
Sbjct: 316 FQNIKPGSHEYEMLEELGFKKIYDIYFIPSEDPERRTDLYAIYSLFASLGLPVIFEH-EP 374

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREARVAQ 473
            N     + A +      I     E      + K +   GK+     +       + + Q
Sbjct: 375 VNPKKIYEKAQKSEARFTI----SELDSDENEFKMITSIGKKTESSHEYIYEDLPSTILQ 430

Query: 474 ITIPISE 480
             +   E
Sbjct: 431 SMMDHEE 437


>gi|295093784|emb|CBK82875.1| histidyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 421

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 124/436 (28%), Positives = 194/436 (44%), Gaps = 47/436 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K      +G  D    ++R+R  +L  I+  Y  +GF  IETP++E+ ++L    
Sbjct: 1   MAKFIK---TPVKGMCDQLPADMRLREHVLSMIKTSYSRFGFTQIETPVMEHIENLTSKQ 57

Query: 61  PDEDRPNKGVFSLQ----------DDDGQWIS---LRYDLTAPLARYVAENFDTIVFPCR 107
             ++   K +F +           D     ++   LRYDLT PL+RY A N + +  P +
Sbjct: 58  GGDN--EKLIFKVMKRGADLARAIDAGKGELADSGLRYDLTLPLSRYYANNKEQLPSPFK 115

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN--DY 165
             +IGPVFR ++   GRFR F QCD+D +G +   A+ E+    +D L  +  +    D+
Sbjct: 116 ALQIGPVFRADQPQKGRFRMFTQCDIDILGDNTNLAEIELVAATSDMLSRIFSEVGITDF 175

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            I IN+R+IL G  +  G   +D       +L ++DK DK GL G++  L E   D    
Sbjct: 176 TIHINDRQILRGAAKNAGFAEED----IASILISLDKYDKIGLDGIRAELTENGYD---- 227

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
                   +E +D  +       + S  E    +       K    +  I    +    +
Sbjct: 228 --------AEMVDKYLEIYQNLGDMSCAEFCRDIDAECLDPKVITNMDEIISSAKTMVAD 279

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
             +I    T+VRG+ YYTG ++E  +     +          + GGGRYD +V  F GQ+
Sbjct: 280 GVKIVFDPTLVRGMGYYTGPIFEVTIDDYNFS----------IAGGGRYDKMVGNFCGQD 329

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           VPATGFSIG  R+I  LK    +   I      ++   D   D   +     + LR AG 
Sbjct: 330 VPATGFSIGFERIITILKDKLENGYKIDSDNVAILIHKDVTLDKKLEIFKEAKELRQAGK 389

Query: 406 RAEMFLGSSKNFGNQL 421
              + +   KN   Q+
Sbjct: 390 TVTIQM-MRKNMKQQI 404


>gi|295109977|emb|CBL23930.1| ATP phosphoribosyltransferase regulatory subunit [Ruminococcus
           obeum A2-162]
          Length = 372

 Score =  156 bits (394), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 144/400 (36%), Gaps = 40/400 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
               P G  D    E   ++ +   IR ++++YG++ IETP  EY +   + +     P+
Sbjct: 4   IFHTPEGVRDIYNGECSQKHHLQTEIRKVFDSYGYEEIETPSFEYFEVFSREVG--TIPS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++   D +G  + LR D T  ++R  A  F+           G  F N     GR ++
Sbjct: 62  KDLYKFFDREGNTLVLRPDFTPSVSRACATYFNPEQEVVTLSYTGNTFINNSSYQGRLKE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q  V+ +G  +  ADAE+  M  + L   G+K     + +        +L+  GL  +
Sbjct: 122 TTQMGVERIGDDSAEADAELLAMTVECLLKSGLKEFQ--VSVGQVDYFKSLLQDAGLDTE 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +                   + ++ L+ +       D     N+        +    + 
Sbjct: 180 AE-------------------ENLRSLISQKNYFGVEDLVHSQNIPENLEKAFLELPHLF 220

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
               +      +       K    L  I E+++        I     ++  L+YYTG ++
Sbjct: 221 GSAEVLTKARSLTDNTCAIKAVERLEEIYEILK-FYEYEKYISFDFGMLSKLQYYTGIIF 279

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +A                  V  GGRY+ L+  F  +   + GF + +  L++AL   + 
Sbjct: 280 QAYT----------YGTGEPVVKGGRYNELLKHFG-KPAASIGFGLAVDNLLMALSRQKI 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           S    K         + +   +  +  +  Q LR+ G   
Sbjct: 329 SLPEKKAP-----VILTYTEANRREAILKAQELRSKGTSV 363


>gi|47459108|ref|YP_015970.1| histidyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81697057|sp|Q6KI17|SYH_MYCMO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|47458437|gb|AAT27759.1| histidyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 445

 Score =  156 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 92/490 (18%), Positives = 179/490 (36%), Gaps = 67/490 (13%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-D 64
               + P+G +D   ++  +   ILD+ R   E + +  I+TP+LE+ D   + + +  D
Sbjct: 16  NFMIQKPKGTSDFFLEKADLFQYILDTFRKEAELFNYSYIQTPILEFYDLFYRSVGETTD 75

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K +F   D   + ++LR + TA + R + EN        + Y  G +FR E+   GR
Sbjct: 76  VVSKEMFIFNDRSERKMALRPEKTAGVIRSLVENKLIFNAENKFYYYGSMFRYERPQKGR 135

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F Q   + +  +++ +D E+ +  +  L      +    I     K+          
Sbjct: 136 YREFTQIGCEWIEDNSDFSDFEILLFASKFLGNFNFNKVILKINNLGNKVERE------N 189

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           +  +            D++    L+   L + + +  N  DF K A         +  FL
Sbjct: 190 YLIELKKYFYKFKDKFDEISLKRLEKNPLRILDDKEINHQDFIKNA-------PKLFDFL 242

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           + +  +  + L   ++ +                       +   +I  ++VRG +YY  
Sbjct: 243 NSETVQKFNNLQNYLRKS-----------------------NISFEIDYSLVRGFDYYNN 279

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +        +       ++ GGGRY  L+    G    A GF+ G+ RL++ LK 
Sbjct: 280 LVFEFVYYDEESRSE------LTILGGGRYSNLIEELGGPKKDAIGFAAGVERLMILLKE 333

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E      ++     I   + D + L K   +   LR   +  +  + S+          
Sbjct: 334 KE-----WEKPIKTSIFVFNKDHEDLYKNFDFVYKLRKRDLVVKQNV-SNFKLQKIYSKI 387

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                   I           + IK+L     L    K+ E                 ++ 
Sbjct: 388 VNEGIKFLIFFDE---KLNQIIIKNLINKNFLDLTNKSQEEK---------------INL 429

Query: 485 VKKILQENKE 494
           VKK ++   +
Sbjct: 430 VKKFIESENK 439


>gi|326391052|ref|ZP_08212600.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter ethanolicus JW 200]
 gi|325992920|gb|EGD51364.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter ethanolicus JW 200]
          Length = 380

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 76/408 (18%), Positives = 165/408 (40%), Gaps = 44/408 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             LP G  D   +E R++ +I +  R ++  +G+  I  P  EY+D+      +      
Sbjct: 2   IYLPDGVQDFLPEEYRVKRKIEEKFREVFIKFGYQEIMPPTFEYNDNFSVLFDEN----- 56

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D  G  ++LR D+T  +AR V+       FP +   +  V+R +    G+ R+F
Sbjct: 57  NLYRFFDKKGNILALRPDVTTQIARIVST-KLKGSFPLKLCYVANVYRYDDPQVGKMREF 115

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G++ E +DAE+  +  + L+++G    D+ + +   +    ++E + L  ++
Sbjct: 116 TQAGIELIGTNHEESDAEIIAVAIEALKSIG--IEDFKVDVGQVEFFKRVVEDLELQNEE 173

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                              +  ++  L +       +F     +  ++   +     +  
Sbjct: 174 -------------------INLLREFLQQKNQSAIEEFINDKGIRGKKAKFLSELPLLFG 214

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  + +  T    +  + L  +  +++  G     I     +V+ L YYTG ++ 
Sbjct: 215 GEEVLKRAKELYDTPKLGETIDYLERVYRILKDFGM-EEYISFDLGMVQNLNYYTGIIFR 273

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +            +  ++  GGRYDGL+  F    +PATGF+I + R ++AL+  +  
Sbjct: 274 CFV----------KGIGYAICTGGRYDGLLGIFGEH-IPATGFAISVERSMLALQKQKKD 322

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             +           + +  +  S       +LR  G   EM+      
Sbjct: 323 IIDKS-----WRVLIKYKENLRSNAYKKATLLRGEGKIVEMYSYEKAK 365


>gi|167036937|ref|YP_001664515.1| histidine--tRNA ligase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115356|ref|YP_004185515.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|229464988|sp|B0K732|HISZ_THEP3 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|166855771|gb|ABY94179.1| Histidine--tRNA ligase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928447|gb|ADV79132.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 380

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 79/408 (19%), Positives = 166/408 (40%), Gaps = 44/408 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             LP G  D   +E + + +I +  R ++  +G+  I  P  EYSD+      +      
Sbjct: 2   IYLPDGVQDFLPEEYKFKRKIEEKFREVFIKFGYQEIMPPTFEYSDNFSVLFDEN----- 56

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D  G  ++LR D+T  +AR V+       FP +   +  V+R +    G+ R+F
Sbjct: 57  NLYRFFDKKGNILALRPDVTTQIARIVST-KLKGSFPLKLCYVANVYRYDDPQVGKMREF 115

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G++ E +DAE+  +  + L++VGIK  D+ + +   +    ++E + L  ++
Sbjct: 116 TQAGIELIGTNHEESDAEIIAVAIEALKSVGIK--DFKVDVGQVEFFKRVVEDLELQNEE 173

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                              +  ++  L +       +F     +  ++   +     +  
Sbjct: 174 -------------------INLLREFLQQKNQSAIEEFINDKGIRGKKAKFLSELPLLFG 214

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  + +  T    +  + L  +  +++  G     I     +V+ L YYTG ++ 
Sbjct: 215 GEEVLKRAKELYDTPKLGETIDYLERVYRILKDFGM-EEYISFDLGMVQNLNYYTGIIFR 273

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +            +  ++  GGRYDGL+  F    +PATGF+I + R ++AL+  +  
Sbjct: 274 CFV----------KGIGYAICTGGRYDGLLGIFGEH-IPATGFAISVERSMLALQKQKKD 322

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             +           + +  +  S       +LR  G   EM+      
Sbjct: 323 IIDKS-----WRVLIKYKENLRSNAYKKATLLRGEGKIVEMYSYEKAK 365


>gi|163815510|ref|ZP_02206883.1| hypothetical protein COPEUT_01675 [Coprococcus eutactus ATCC 27759]
 gi|158449147|gb|EDP26142.1| hypothetical protein COPEUT_01675 [Coprococcus eutactus ATCC 27759]
          Length = 421

 Score =  156 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 124/437 (28%), Positives = 195/437 (44%), Gaps = 49/437 (11%)

Query: 1   MGKKTKLRAELP-RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M K      + P +G  D    ++R+R  +L  I+  Y  +GF  IETP++E+ ++L   
Sbjct: 1   MAKF----IKTPVKGMCDQLPADMRLREHVLSMIKTSYSRFGFTQIETPVMEHIENLTSK 56

Query: 60  LPDEDRPNKGVFSLQ----------DDDGQWIS---LRYDLTAPLARYVAENFDTIVFPC 106
              ++   K +F +           D     ++   LRYDLT PL+RY A N + +  P 
Sbjct: 57  QGGDN--EKLIFKVMKRGADLARAIDAGKGELADSGLRYDLTLPLSRYYANNKEQLPSPF 114

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN--D 164
           +  +IGPVFR ++   GRFR F QCD+D +G +   A+ E+    +D L  +  +    D
Sbjct: 115 KALQIGPVFRADQPQKGRFRMFTQCDIDILGDNTNLAEIELVAATSDMLSGIFSEVGITD 174

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
           + I IN+R+IL G  +  G   DD       +L ++DK DK GL G++  L E   D + 
Sbjct: 175 FTIHINDRQILRGAAKNAGFAEDD----IASILISLDKYDKIGLDGIRAELTENGYDAAM 230

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                       +D  +       + S     + +       K  + +  I    R    
Sbjct: 231 ------------VDKYLEIYQNLGDVSCAAFCKDINENCLDPKVVSNMDEIISSARTMVA 278

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
           +  +I    T+VRG+ YYTG ++E  +     +          + GGGRYD +V  F GQ
Sbjct: 279 DGVKIVFDPTLVRGMGYYTGPIFEVTIDDYNFS----------IAGGGRYDKMVGNFCGQ 328

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           +VPATGFSIG  R+I  LK    +   I      ++   D   D   +     + LR AG
Sbjct: 329 DVPATGFSIGFERIITILKDKLDNGYKIDADNVAILIHKDVTLDKKLEIFKEAKELRQAG 388

Query: 405 IRAEMFLGSSKNFGNQL 421
               + +   KN   Q+
Sbjct: 389 RTVTIQM-MRKNMKQQI 404


>gi|220927836|ref|YP_002504745.1| histidyl-tRNA synthetase 2 [Clostridium cellulolyticum H10]
 gi|254801980|sp|B8I5U8|HISZ_CLOCE RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|219998164|gb|ACL74765.1| histidyl-tRNA synthetase 2 [Clostridium cellulolyticum H10]
          Length = 419

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 97/457 (21%), Positives = 180/457 (39%), Gaps = 47/457 (10%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
           ++ +   P G  D    E   +  I   IRN + +YG+  IETP +E+ D     +    
Sbjct: 2   SRWKIYTPDGVQDILFDECYKKREIEKRIRNTFRSYGYYEIETPTIEFFDVFSSEIEH-- 59

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            P + +    D  G+ + LR D+T P+AR  A     +  P +   IG VFR  + G GR
Sbjct: 60  FPQESMVKFFDQKGRILVLRPDITVPVARITATKNRDVQVPIKYSYIGNVFRFNEVGGGR 119

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             +F Q  V+ +G S+  +DAE+  M  +TL++VG+K  ++ I I   +   G+ E+ G 
Sbjct: 120 QNEFTQAGVEMLGDSSSESDAEIIAMAINTLKSVGLK--EFKIEIGQVEFFKGLAEEAGF 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             +D                   +  +   + +       +     ++++E  +I++   
Sbjct: 178 SNED-------------------IDAISKQIDKKDLVGVEEILNRYDISTELREIVLKLT 218

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +     + + ++         K    +  +  ++   G  S  + I   +++ L Y TG
Sbjct: 219 GLFGSVDVIKEFKKASINGRSLKAIENVEEVVSILCDYG-LSEYVSIDLGMLKSLNYDTG 277

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +                V   +  G RYD L S F  +  PATGFS+ I+ L+ A++ 
Sbjct: 278 ITFRGFTN----------GVGFPILSGARYDNLTSSFG-KECPATGFSLRINMLMTAMEK 326

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
              +         V       +  +  +     + LR   ++ E F+  +K      KYA
Sbjct: 327 AGHTFERPSVDSLVCY-----EKTNRKRAIEIAEALRKQDMKIETFV-LTKGIDQAKKYA 380

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKG--KELSRE 459
             +     I      R    + + D+     +E S +
Sbjct: 381 ASKKIGGIIYI----RDNDKITVYDIKNNITEETSFD 413


>gi|115652043|ref|XP_787474.2| PREDICTED: similar to histidyl-tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
          Length = 494

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 23/282 (8%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K   +  +G  D   +++ IR  +   I + ++ +G + I+TP+ E  ++L     ++ 
Sbjct: 60  QKYVLKTAKGTRDYTPRQMAIREGVFKVIIDTFKRHGAETIDTPVFELKETLTGKYGED- 118

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K ++ L+D  G+ +SLRYDLT P ARYVA N    +             N     GR
Sbjct: 119 --SKLIYDLKDQGGELLSLRYDLTVPFARYVAMNKIAKIKRYHIA-KVYRRDNPAMTRGR 175

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +R+F QCD D  G          C+ +   + +  +K  D+ I +N+R+ILDG+ E  G+
Sbjct: 176 YREFYQCDFDIAGQYDAMIPDAECVKIVHEILS-NLKLGDFVIKVNHRQILDGMFEACGV 234

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D    +      A+DKLDK   + V+  + +              +     D +  F+
Sbjct: 235 PDD----KFRTACSAVDKLDKTFWEDVRAEMVDE-----------KGIDPAAADRIGFFV 279

Query: 245 SIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSG 283
             +    + +       +K   A ++G   + ++ +     G
Sbjct: 280 QQNGGPELVDKLLTESSLKDNKAAKQGLEAMRLLLQYCEILG 321



 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 51/112 (45%)

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
             VP  G SIGI R+   +++    ++N+       +       + L +       L +A
Sbjct: 324 DKVPCVGVSIGIERVFSIMEAKAQLSSNVVRTIETQVLVASAQPNMLEERMKLCNQLWSA 383

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
           GI+AEM    +    +Q + A++ + PL  + G  E   G++ +++ A  +E
Sbjct: 384 GIKAEMSYKKNPKMLDQYQQAEKYSIPLLAVIGEQELKDGVITLRNSATREE 435


>gi|269114961|ref|YP_003302724.1| Histidyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322586|emb|CAX37321.1| Histidyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 425

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 95/449 (21%), Positives = 183/449 (40%), Gaps = 60/449 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  +G  D    E ++ N I +    I +NY F  I TP++E ++   + + +  D  +
Sbjct: 2   FQRLKGTRDIYGLEEKVLNLIENKFFKIIKNYNFKRICTPIIEDANLFIRSVGETSDIVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++  +D+  + I+LR + TA   R   EN    + P +    GP+FR E+   GR+RQ
Sbjct: 62  KEMYLFKDNGQRDIALRPEGTASTIRAFVENKINNLEPTKLAYFGPMFRYERPQKGRYRQ 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGILEKIG 183
           FIQ  V+ + +S    + E+  +  D L+++ I      I       +R     IL++  
Sbjct: 122 FIQGGVELIENSTIENNFEIIKLAYDFLKSLKISNITLEINNLGSFESRNNYIEILKEYF 181

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               ++LNE          L +     +++L  +                 +    ++ +
Sbjct: 182 SKYKEQLNEIS--------LIRLQKNVLRILDDKEEIKKDF---------VKNAPKLIDY 224

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS   ++    L +L+          +E  +             +  I+  +VRGL+YY 
Sbjct: 225 LSSIEKERFKNLLDLL----------DEFEI-------------KYVINPYLVRGLDYYN 261

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V+E +      +         +V GGGRYDG++  F G ++ + GF+ G+ RL+  + 
Sbjct: 262 DVVFEFV------SNSDALGSQCTVLGGGRYDGMIKSFGGPDIGSIGFAFGVDRLMEIIM 315

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           S   +   +     +LI  ++ D  +  + +     LR    +  +F    ++  +  K 
Sbjct: 316 SNIDNYPELSFNETILIAYLNEDEKN--EIRKIAYDLRR-NFQV-IFPSQKQSIKSLFKL 371

Query: 424 ADRRNCPLAIIQGTGER--SRGMLQIKDL 450
             +      I     E    +  L+IK L
Sbjct: 372 QYKLQPKYLIF---KELNMKKNELKIKSL 397


>gi|326928221|ref|XP_003210279.1| PREDICTED: histidyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 559

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 20/246 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   K++ IR R+  +I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 11  KHKFVLKTPKGTRDYGPKQMAIRERVFIAIITCFKRHGAEVIDTPVFELKETLTGKYGED 70

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 71  ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIA-KVYRRDNPAMTRG 126

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G          C+ +   + +  ++  D+ I +N+R+ILDG+    G
Sbjct: 127 RYREFYQCDFDIAGQFDPMIPDAECLKIVHEILS-DLQLGDFLIKVNDRRILDGMFAVCG 185

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +       +   +  ++DKLDK   + V+            +      L+ E  D +  +
Sbjct: 186 VPDS----KFRTICSSVDKLDKMPWEEVR-----------SEMVGEKGLSPEAADRIGEY 230

Query: 244 LSIDLE 249
           + +  E
Sbjct: 231 VQLHGE 236



 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 2/188 (1%)

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QN 345
           R+    ++ RGL+YYTG +YEA+L     +  ++ V  GSV GGGRYDGLV  F    + 
Sbjct: 371 RVSFDLSLARGLDYYTGVIYEAVLLQQENDHGEESVSVGSVAGGGRYDGLVGMFDPKGRK 430

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           VP  G SIGI R+   L+    ++          +         L +       L  AGI
Sbjct: 431 VPCVGVSIGIERIFSILEQRLEASEEKIRTTETQVLVASAQKKLLEERLKLISELWDAGI 490

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +AE+    +    NQL+Y +    PL  I G  E   G+++++ +A  +E++   ++   
Sbjct: 491 KAEVLYKKNPKLLNQLQYCEDTGIPLVAIVGEQELKDGVVKLRVVATREEVNIRRESLVE 550

Query: 466 WREARVAQ 473
               R +Q
Sbjct: 551 EIRRRTSQ 558


>gi|323705196|ref|ZP_08116772.1| histidyl-tRNA synthetase 2 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535622|gb|EGB25397.1| histidyl-tRNA synthetase 2 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 386

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 93/423 (21%), Positives = 172/423 (40%), Gaps = 47/423 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    E+R +  I + +RN +E  G++ I  P  EY D+              +
Sbjct: 4   LPDGVQDFLPDELRFKRNIENILRNTFELSGYEEIMPPTFEYIDNFSVTSG-IFFDENNI 62

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D  G  ++LR D+T  +AR  +  ++      +   I  VFR +    GR R+F Q
Sbjct: 63  YRFFDKKGDLLALRPDVTTQVARIASTKYNEYP--LKFSYIANVFRYDNPQVGRMREFTQ 120

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G + E +DAE   +  + L  + IK  D+ + I   +    IL ++ L  +++ 
Sbjct: 121 AGIELIGRNHEYSDAECISVAIEALRNIEIK--DFKVDIGQAEFFKSILCELRLTKEEE- 177

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               +K LL +        F K  N+T    +++ +        
Sbjct: 178 ------------------DILKGLLKDKNQSEIEYFLKYNNITGRNYELVANLPLFFGGI 219

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E  + V G  +  K  N L  + ++++    +S  I     +V+ ++YYTG ++   
Sbjct: 220 DVVEEAKRVYGFESAMKALNYLERVYDILKDFDMDS-YITFDLGMVQSIDYYTGLIFRVF 278

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +               ++  GGRYD L+  +  +++PATGF+I + R ++AL+S    T 
Sbjct: 279 VKDLGY----------AICAGGRYDNLLKNYG-KDLPATGFAISVERAMLALQSQSGITT 327

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
              +        +  D  +          LR  G  AE+    +       +YA+R+   
Sbjct: 328 KKPKR-----VAVVFDEKNRKVAYDIAVKLRKQGNIAELVNMDNS------EYANRKKFD 376

Query: 431 LAI 433
             I
Sbjct: 377 EII 379


>gi|167039649|ref|YP_001662634.1| histidine--tRNA ligase [Thermoanaerobacter sp. X514]
 gi|300915102|ref|ZP_07132417.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter sp. X561]
 gi|307725025|ref|YP_003904776.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter sp. X513]
 gi|229464989|sp|B0K622|HISZ_THEPX RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|166853889|gb|ABY92298.1| Histidine--tRNA ligase [Thermoanaerobacter sp. X514]
 gi|300888826|gb|EFK83973.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter sp. X561]
 gi|307582086|gb|ADN55485.1| histidyl-tRNA synthetase 2 [Thermoanaerobacter sp. X513]
          Length = 380

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 75/408 (18%), Positives = 164/408 (40%), Gaps = 44/408 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             LP G  D   +E + + +I +  R ++  +G+  I  P  EY+D+      +      
Sbjct: 2   IYLPDGVQDFLPEEYKFKRKIEEKFREVFIKFGYQEIMPPTFEYNDNFSVLFDEN----- 56

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D  G  ++LR D+T  +AR V+       FP +   +  V+R +    G+ R+F
Sbjct: 57  NLYRFFDKKGNILALRPDVTTQIARIVST-KLKGSFPLKLCYVANVYRYDDPQVGKMREF 115

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G++ E +DAE+  +  + L+++G    D+ + +   +    ++E + L  ++
Sbjct: 116 TQAGIELIGTNHEESDAEIIAVAIEALKSIG--IEDFKVDVGQVEFFKRVVEDLELQNEE 173

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                              +  ++  L +       +F     +  ++   +     +  
Sbjct: 174 -------------------INLLREFLQQKNQSAIEEFINDKGIRGKKAKFLSELPLLFG 214

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  + +  T    +  + L  +  +++  G     I     +V+ L YYTG ++ 
Sbjct: 215 GEEVLKRAKELYDTPKLGETIDYLERVYRILKDFGM-EEYISFDLGMVQNLNYYTGIIFR 273

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +            +  ++  GGRYDGL+  F    +PATGF+I + R ++AL+  +  
Sbjct: 274 CFV----------KGIGYAICTGGRYDGLLGIFGEH-IPATGFAISVERSMLALQKQKKD 322

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             +           + +  +  S       +LR  G   EM+      
Sbjct: 323 IIDKS-----WRVLIKYKENLRSNAYKKATLLRGEGKIVEMYSYEKAK 365


>gi|323703216|ref|ZP_08114869.1| histidyl-tRNA synthetase 2 [Desulfotomaculum nigrificans DSM 574]
 gi|323531875|gb|EGB21761.1| histidyl-tRNA synthetase 2 [Desulfotomaculum nigrificans DSM 574]
          Length = 401

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 86/424 (20%), Positives = 157/424 (37%), Gaps = 43/424 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            L  G  D    E      + D    +   +G+  + TP  EY ++    +  E+     
Sbjct: 8   RLAPGVRDLLPAEAYRMRGLQDKFLQLVSAWGYQEVITPTFEYLEN----VASEELQEDK 63

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +F   D  G  ++LR D+T P+AR VA     +  P R + +  VF  E+   GR R+F 
Sbjct: 64  LFKFLDRQGHLMALRPDMTRPMARLVATRMKGVTPPLRLFYLANVFNYEEPQVGRQREFC 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+ +G S   ADAE+  ++ + L + G+   D+ I + +  I  G+++++GL  ++ 
Sbjct: 124 QAGVELMGYSTPQADAEVVALVTEYLSSTGLS--DFQISVGHVGIFHGLVQQLGLAKEEA 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              Q +K  LG        +       T  +    +  + +   
Sbjct: 182 -------------------QSLKEALGNKDFVKVEEILSNHAATPAEARRALDLIELRGG 222

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +      +            L  + + ++  G     I +   ++RGL+YYTG V+E 
Sbjct: 223 PEILNKAMELAADGPAADALKNLRSLYQGLQDHGVEQ-YITLDLGLLRGLDYYTGLVFE- 280

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                        V  G    GG     +    G  +PATGF++ + R++VAL+ L+   
Sbjct: 281 ----------GYSVAMGFPICGGGRYNQLLSTFGHPLPATGFAVNLERVLVALERLQGPP 330

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            +           +  +    +        LR  G++    L        +   A  +  
Sbjct: 331 QDPAPD-----VLVAWEEGGYANALAEAGRLRNQGLKVITALAELPPAKAK-SEAVSQGV 384

Query: 430 PLAI 433
              I
Sbjct: 385 RKMI 388


>gi|304436478|ref|ZP_07396452.1| possible histidine--tRNA ligase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304370524|gb|EFM24175.1| possible histidine--tRNA ligase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 399

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 87/409 (21%), Positives = 171/409 (41%), Gaps = 43/409 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K  +  E P G  D    ++     +   +  I+ ++G+D I TP +E+ ++L   +
Sbjct: 8   MNAKNAI-LETPYGTRDLLPADVIEMRYLDQILSQIFSSWGYDEIATPTIEHLETLVSRI 66

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E+     +F L  +  + ++LR ++T P+AR V+     +  P +   IG VFR E+ 
Sbjct: 67  QEEN----DLFILSGNKNRLLALRNEMTTPIARLVSSRLKDLPAPLKLSYIGNVFRIEQT 122

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G +   ADAE+  +  + + A GIK    HI       L G++ 
Sbjct: 123 QEGRQCEFHQAGVELMGCNTAAADAEIIALAIEAVLACGIKEFQIHI--GQVNFLKGMMT 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+                        + +K  +       +        ++S   +++
Sbjct: 181 AFGIDD-------------------AHREALKNAMESHDIVQTNQLIDTLAISSASKELL 221

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            S   ++ ++ + E    +      +   N LV I  +++   + ++ +     ++R   
Sbjct: 222 KSIPLLNGKEDVIEHIYKLPLNQESQHATNNLVEIYSILKDY-HLADYVHFDFGVIRDFH 280

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E             P +   + GGGRYD L+ ++    +PATGF++G+ R+I+
Sbjct: 281 YYTGMVFEGY----------SPGLGFPLCGGGRYDDLLGKYG-APMPATGFALGMERVIL 329

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           A K    +    ++        + +    +       + LR  G   E+
Sbjct: 330 ARKRQNVNAQMAQKD-----VYIGYGEGQIQSAITRAKALRNEGNVVEL 373


>gi|215259623|gb|ACJ64303.1| histidyl-tRNA synthetase [Culex tarsalis]
          Length = 295

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 66/285 (23%), Positives = 129/285 (45%), Gaps = 27/285 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
              +  + P+G  D   + + +R RI D +  +++ +G + I+TP+ E  + L     ++
Sbjct: 30  NKNITLKTPKGTRDYGPESMALRQRIFDKVIAVFKKHGAETIDTPVFELKEVLTGKYGED 89

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--G 121
              +K ++ L+D  G+ ++LRYDLT P AR+V       VF  R Y I  V+R +     
Sbjct: 90  ---SKLIYDLKDQGGEILALRYDLTVPFARFV---GMGNVFNIRRYHIAKVYRRDNPAMT 143

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G+         C+ +   + +  +   ++ + +N+RK+LDG+ E 
Sbjct: 144 KGRYREFYQCDFDIAGTYDPMLPDAECVKVVAEILS-ELDIGEFVVKLNHRKLLDGMFEA 202

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  D    +   +  ++DKLDK     V+  + +              L     D + 
Sbjct: 203 CGVPAD----KFRTICSSVDKLDKTPWDEVRKEMIDE-----------KGLDGAIADKIG 247

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSG 283
            F+ +     + +     E +KG  +  +   ++ ++ +     G
Sbjct: 248 EFVRLSGGVDLVDKLAADENLKGIKSAVERIEDMRLLLQYCEVFG 292


>gi|302876723|ref|YP_003845356.1| histidyl-tRNA synthetase 2 [Clostridium cellulovorans 743B]
 gi|307687399|ref|ZP_07629845.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           cellulovorans 743B]
 gi|302579580|gb|ADL53592.1| histidyl-tRNA synthetase 2 [Clostridium cellulovorans 743B]
          Length = 403

 Score =  153 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 97/438 (22%), Positives = 173/438 (39%), Gaps = 45/438 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K    +P G  D    +  I+N++++S+R  Y+  G+  I TP LEY D    + 
Sbjct: 1   MKKLNKY---IPEGMRDLLFDQCEIKNQVINSLRGFYKENGYFEIATPTLEYLDVF--YG 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++ L D  G+ + LR D+T PL R          +P R    G +FRN + 
Sbjct: 56  QSGSIDQESMYKLLDSRGRLLVLRPDMTTPLMRVANTKLREATYPLRVCYSGNIFRNNEI 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G+  +  Q  ++ +GS    +DA++ +     L  VG+K  D+HI I   +    ++E
Sbjct: 116 LEGKLSEITQSGIEVIGSGNAKSDADVIITAIKALLKVGVK--DFHIEIGQAEFFKSLIE 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L  +D           +D L  F  +   + L     +NS           +  + +
Sbjct: 174 DLELFDED-----------MDTLRSFIEKKNFVALRNFIEENSETL-------GDNAEAL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +  ++   K + +  +++            +  + E +   G  S  + I   +++ +E
Sbjct: 216 KALPTLFGGKEVLDSAKVLTKNANAICAIENIREVYESLESLG-LSEYVSIDLGMIQFIE 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  +                   S+  GGRYD L S F     PATGF+I +  +I 
Sbjct: 275 YYTGTTFRGYSSQLG----------CSILSGGRYDNLASEFGC-PKPATGFAIHVDNVIN 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            LK+     +  K         +  +S +  K     + +R  G   EM L  S++    
Sbjct: 324 VLKNQGDQKDEDK------YVLVHFESKATVKAYAVAEAVREEGYIVEMSLLDSED--EA 375

Query: 421 LKYADRRNCPLAIIQGTG 438
           + Y  ++     I     
Sbjct: 376 IDYGKKKGFCNIIFVSED 393


>gi|74268313|gb|AAI02471.1| HARS protein [Bos taurus]
          Length = 335

 Score =  153 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 78/340 (22%), Positives = 142/340 (41%), Gaps = 21/340 (6%)

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
             +    +   +         ++  D+ + +N+R+ILDG+    G+       +   +  
Sbjct: 7   QFDPMLPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVPDS----KFRTICS 62

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL--- 255
           ++DKLDK   + VK            +      L  E  D +  ++      S+ E    
Sbjct: 63  SVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQ 111

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +       +G  +L ++ E +   G  +++I    ++ RGL+YYTG +YEA+L  P 
Sbjct: 112 DPKLSQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARGLDYYTGVIYEAVLLQPP 170

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVALKSLESSTNNIK 373
               ++P+  GSV  GGRYDGLV  F    + VP  G SIG+ R+   ++    +     
Sbjct: 171 ARAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKV 230

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +         L +       L  AGI+AE+    +    NQL+Y +    PL  
Sbjct: 231 RTTETQVLVASAQKKLLEERLKLISELWDAGIKAELLYKKNPKLLNQLQYCEETGIPLVA 290

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           I G  E   G+++++ +A  +E+    ++     + R +Q
Sbjct: 291 IIGEQELKDGVIKLRSVASREEVDVRREDLVEEIKRRTSQ 330


>gi|20808530|ref|NP_623701.1| histidyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|254478829|ref|ZP_05092195.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|23821715|sp|Q8R880|HISZ_THETN RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|20517153|gb|AAM25305.1| Histidyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|214035236|gb|EEB75944.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 379

 Score =  153 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 85/402 (21%), Positives = 166/402 (41%), Gaps = 45/402 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             LP G  D   +E   +  I D  R +++++G+  I  P  EYS++      +      
Sbjct: 2   IYLPDGVQDFLPEEYEFKRNIEDKFREVFKSFGYKEIMPPTFEYSENFSHLFDEN----- 56

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D  G  ++LR D+TA +AR V+       +P +   +  V+R E    G+ R+F
Sbjct: 57  SMYRFFDKKGNILALRPDVTAQIARIVST-KLEGRYPLKLCYVANVYRYEDTQVGKMREF 115

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G++ E +DAE+  +  + L++ G+K  D+ I I + ++   I+  + L  +D
Sbjct: 116 TQAGVELIGTNHEESDAEVIALSIEALKSTGLK--DFKIDIGHAEVFGSIVRNLNLGNED 173

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                              +  ++ LL +       DF K   +  E+  ++     +  
Sbjct: 174 -------------------VNLLRELLEQKNQSAIEDFIKQKEIKREEAKLLRELPLLFG 214

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + E  +  +     E     L  + +++   G     I     +V+ L YYTG ++ 
Sbjct: 215 GEEILEKLKK-ENFKETEGVLEYLDRVYKILEDFGMKE-YISFDLGMVQNLNYYTGIIFR 272

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +               ++  GGRYD L+  +  +++PATGF+I + R+++AL+     
Sbjct: 273 GFVKGLGY----------AICTGGRYDKLLKIYG-KDLPATGFAISVERVMLALQRQSKG 321

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                    V         +   +      +LR  G   EM+
Sbjct: 322 EWVKPRRVLVRY-----KEEERRRAYEKANVLRKEGNVVEMY 358


>gi|269837702|ref|YP_003319930.1| Histidine--tRNA ligase [Sphaerobacter thermophilus DSM 20745]
 gi|269786965|gb|ACZ39108.1| Histidine--tRNA ligase [Sphaerobacter thermophilus DSM 20745]
          Length = 495

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 88/489 (17%), Positives = 171/489 (34%), Gaps = 76/489 (15%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  RG  D      + R   L+ +   ++ +G+ PIETP++E ++   +    E     
Sbjct: 15  IERLRGMVDVDPSRYQARRLALERVLETFDRHGYRPIETPVVEPTELFLRKSGGERV--A 72

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++    D + I+LR + TA + R  A++      P R    GPVFR EK   GR RQF
Sbjct: 73  QMYAFHYRD-REIALRPEHTASVLRMYADSMQGEPLPLRLSYAGPVFRYEKPQAGRTRQF 131

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            +   + +G+    ADAE+  +  + L AVG+   +  + + +  I+   L ++ L    
Sbjct: 132 TEVGCELLGAEGPVADAEVIHLALEGLRAVGV---EGRLVLGHIGIVLDFLNRLPLRQRA 188

Query: 189 KLNERLIVLRAI----------------------------DKLDKFGLQGVKLLLGEGRT 220
           +      + R                              D L       ++  +     
Sbjct: 189 RDWLVWSMERLRKGQEVDLETALAGLVAGDPLASIFTEMSDTLHDIPPDRLEDWVLAILR 248

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLE----------------------KSMHELYEL 258
           +       G     E +  +++ ++   +                        +  +  L
Sbjct: 249 EVGVQVQGGTRTPEEIVAGLIAKMNRQSDAGDVRRAFDFVRELAAIQGPPGDVIPAVRAL 308

Query: 259 VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
            +     ++    L  + +L+   G+  + I++S  + RGL YYTG ++E          
Sbjct: 309 TRRHGLHDEPIARLEEVLDLLAAYGHAVDTIELSLGLGRGLHYYTGMLFEIYAPGRPG-- 366

Query: 319 KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV 378
                    + GGGRYD L      +                 L+ +        E    
Sbjct: 367 -------LQLCGGGRYDDLAQMLGTRQPLPACGFSYG------LERVVEVAGITVEPPAP 413

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  + + S + +     ++ LR  G R E+ +   ++     KYA RR     ++    
Sbjct: 414 EVLVVPNSSAASAAAIRLSERLRAEGRRVEIDV-RGRSVHASRKYALRRGIAEVMVVDE- 471

Query: 439 ERSRGMLQI 447
               G + +
Sbjct: 472 ---AGGVTV 477


>gi|238926826|ref|ZP_04658586.1| possible histidine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885358|gb|EEQ48996.1| possible histidine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 399

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 86/409 (21%), Positives = 171/409 (41%), Gaps = 43/409 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K  +  E P G  D    ++     +   +  I+ ++G+D I TP +E+ ++L   +
Sbjct: 8   MNAKNAI-LETPYGTRDLLPADVIEMRYLDQILSQIFSSWGYDEIATPTIEHLETLVSRI 66

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +E+     +F L  +  + ++LR ++T P+AR V+     +  P +   IG VFR E+ 
Sbjct: 67  QEEN----DLFILSGNKNRLLALRNEMTTPIARLVSSRLKDLPAPLKLSYIGNVFRIEQT 122

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G     ADAE+  +  + + A GIK    HI       L G++ 
Sbjct: 123 QEGRQCEFHQAGVELMGCHTAAADAEIIALAIEAVLACGIKEFQIHI--GQVNFLKGMMT 180

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+                        + +K  +       +       +++S   +++
Sbjct: 181 AFGIDD-------------------AHREALKNAMESHDIVQTNQIIDTLSISSASKELL 221

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            S   ++ ++ + E    +      +   N LV I  +++   + ++ +     ++R   
Sbjct: 222 KSIPLLNGKEDVIEHIYNLPLNQESQHATNNLVEIYSILKDY-HLADYVYFDFGVIRDFH 280

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E             P +   + GGGRYD L+ ++    +PATGF++G+ R+++
Sbjct: 281 YYTGMVFEGY----------SPGLGFPLCGGGRYDDLLGKYG-TPMPATGFALGMERVVL 329

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           A K    +    ++        + +    +       + LR  G   E+
Sbjct: 330 ARKRQNVNAQMAQKD-----VYIGYGEGQIQPAITRAKALRNDGNVVEL 373


>gi|213621233|ref|ZP_03374016.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 154

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 1/149 (0%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
             +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +    + + +  D  
Sbjct: 6   NIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVV 65

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+   GR+R
Sbjct: 66  EKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYR 125

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTL 155
           QF Q   +  G      DAE+ M+ A   
Sbjct: 126 QFHQLGAEVFGLQGPDIDAELIMLTARWW 154


>gi|317497364|ref|ZP_07955687.1| ATP phosphoribosyltransferase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895433|gb|EFV17592.1| ATP phosphoribosyltransferase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 393

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 75/409 (18%), Positives = 154/409 (37%), Gaps = 44/409 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK   R   P G  D    E   R+++   +  ++ +YG++ I TP  E+ D      
Sbjct: 1   MNKK---RVHTPEGVRDVYGTEYGQRSKLKAKLNKVFASYGYEGIRTPGFEFFDVFN--S 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + +F   D +G  + LR D+T  +AR +A+ F+      R    G VF N   
Sbjct: 56  EKGTVSAREMFKFFDREGNTLVLRPDVTPSIARCIAKYFNEENMGIRLSYAGNVFLNNSS 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              + ++  Q   + V  ++  AD E   M  D   A G+   D+ + I   +  +G+ +
Sbjct: 116 YQLKLKETCQLGAELVNDASVQADTESIAMAIDCFLAAGLT--DFRLSIGEVEFFNGLTQ 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            I                            ++ L+         ++ +  +L+ +  D+ 
Sbjct: 174 TIKDEE--------------------VKTQLRELILNKNYFGLMEYVETLDLSDKIKDVF 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + F  ++ + ++ +  E +      +K    L  + ++++  G     +     ++    
Sbjct: 214 LHFNELNGDVAILDQAEAMVENEQSKKAIKRLRDVYDILKLYG-KEQYVSFDLGMLNKHN 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++                  +V  GGRYD L+ +F  +  P+ GF+I +  L++
Sbjct: 273 YYTGIIFKGYT----------YGTGDAVLKGGRYDNLIEQFG-KKAPSVGFAIVLDELMM 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           AL               ++         ++    +  + LR  G +  +
Sbjct: 322 ALSRQGIHMEADHMDTMIIY-----KEATMKDAILRAEELRKEGKKVIL 365


>gi|219849073|ref|YP_002463506.1| histidyl-tRNA synthetase 2 [Chloroflexus aggregans DSM 9485]
 gi|219543332|gb|ACL25070.1| histidyl-tRNA synthetase 2 [Chloroflexus aggregans DSM 9485]
          Length = 479

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 105/499 (21%), Positives = 176/499 (35%), Gaps = 66/499 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L RG  D    E      I   +      +G+  I+ P++E+ +   + L ++   
Sbjct: 1   MTVDLVRGMRDVMPAEYLTSRHIQTILERTIAGFGYQMIDAPIIEHRELYLRKLGEDLVG 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
               FS     G+ ++LR + TA + R           P R    GPVFR E+     +R
Sbjct: 61  KVYEFSF---GGRDLALRPEWTASVLRAYVAGMQDQPLPLRLSYAGPVFRYERPQRHTYR 117

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q   + +G     ADAE+  +    L A G+   DY + I +  +   +L +  L  
Sbjct: 118 QFTQVGGEIIGGLPPRADAEVIALACAGLNAAGVT--DYTVRIGHIGLARELLSRFDLPE 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV----------------------KLLLGEGRTDNSG 224
             +      + R   +      + V                       L L         
Sbjct: 176 RTRGLLVWSLERLRAEGLAPVRERVLANLGTPPEGLELPAGLDDAQAALWLERVLAAMGI 235

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSM------------------HELYELVKGTIAGE 266
           D   G    +E I  ++  L    E+ +                  H     +   +  E
Sbjct: 236 DLRTGTRSPAEVIQRLLRTLRRADEQPLVEAALAQLARLAAITGTPHHTLPALTDLLGTE 295

Query: 267 -KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
              F EL  I +L+   G +  ++ I   + RGL YYTG ++E                 
Sbjct: 296 SAAFRELQAILDLLIAHGVSPQQVIIDGALGRGLHYYTGLIFEIYDSEGN---------- 345

Query: 326 GSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
             + GGGRYD LV      Q+VPA GF+ G+ R++ A           +   P  +    
Sbjct: 346 -QLCGGGRYDDLVGALGGRQSVPAVGFAYGLERVVAA-------ATPPEPTDPRTVLVAA 397

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
              +      +   +LR +G    + +   ++  + L+ A RR    A+I G  ER    
Sbjct: 398 VSDEDYPYAVLVANLLRMSGHTVVLDV-RKRSIKDNLRDATRRGFAAAVIAGAAEREGEY 456

Query: 445 LQIKDLAKGKELSREIKNN 463
           +  +DLA   E    +   
Sbjct: 457 VVWRDLATRTERRITLAEL 475


>gi|223698229|gb|ACN18726.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698232|gb|ACN18728.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698235|gb|ACN18730.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698241|gb|ACN18734.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698244|gb|ACN18736.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698247|gb|ACN18738.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698250|gb|ACN18740.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698253|gb|ACN18742.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698256|gb|ACN18744.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698259|gb|ACN18746.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698262|gb|ACN18748.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698265|gb|ACN18750.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698268|gb|ACN18752.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698271|gb|ACN18754.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698274|gb|ACN18756.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698277|gb|ACN18758.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698280|gb|ACN18760.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698283|gb|ACN18762.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698286|gb|ACN18764.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698289|gb|ACN18766.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698292|gb|ACN18768.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698295|gb|ACN18770.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698307|gb|ACN18778.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698310|gb|ACN18780.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698313|gb|ACN18782.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698316|gb|ACN18784.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698319|gb|ACN18786.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698322|gb|ACN18788.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698325|gb|ACN18790.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698328|gb|ACN18792.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698331|gb|ACN18794.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698334|gb|ACN18796.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698337|gb|ACN18798.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698340|gb|ACN18800.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698343|gb|ACN18802.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698346|gb|ACN18804.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698349|gb|ACN18806.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698355|gb|ACN18810.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698358|gb|ACN18812.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698361|gb|ACN18814.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698364|gb|ACN18816.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698367|gb|ACN18818.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698370|gb|ACN18820.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698373|gb|ACN18822.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698376|gb|ACN18824.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698379|gb|ACN18826.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698382|gb|ACN18828.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698388|gb|ACN18832.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698391|gb|ACN18834.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698394|gb|ACN18836.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698397|gb|ACN18838.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698400|gb|ACN18840.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698403|gb|ACN18842.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698406|gb|ACN18844.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698409|gb|ACN18846.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698412|gb|ACN18848.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698415|gb|ACN18850.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698418|gb|ACN18852.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698421|gb|ACN18854.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698424|gb|ACN18856.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698427|gb|ACN18858.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698430|gb|ACN18860.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698433|gb|ACN18862.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698436|gb|ACN18864.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698439|gb|ACN18866.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698442|gb|ACN18868.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698445|gb|ACN18870.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698448|gb|ACN18872.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698451|gb|ACN18874.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698454|gb|ACN18876.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698457|gb|ACN18878.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698460|gb|ACN18880.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698463|gb|ACN18882.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698466|gb|ACN18884.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698469|gb|ACN18886.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698472|gb|ACN18888.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698475|gb|ACN18890.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698478|gb|ACN18892.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698481|gb|ACN18894.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698484|gb|ACN18896.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698487|gb|ACN18898.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698490|gb|ACN18900.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698493|gb|ACN18902.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698496|gb|ACN18904.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698499|gb|ACN18906.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698502|gb|ACN18908.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698505|gb|ACN18910.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698508|gb|ACN18912.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698517|gb|ACN18918.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698520|gb|ACN18920.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698523|gb|ACN18922.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698526|gb|ACN18924.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698529|gb|ACN18926.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698532|gb|ACN18928.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698535|gb|ACN18930.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698538|gb|ACN18932.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698541|gb|ACN18934.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698544|gb|ACN18936.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698547|gb|ACN18938.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698550|gb|ACN18940.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698553|gb|ACN18942.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698556|gb|ACN18944.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698559|gb|ACN18946.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698562|gb|ACN18948.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698565|gb|ACN18950.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698568|gb|ACN18952.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698571|gb|ACN18954.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698574|gb|ACN18956.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698577|gb|ACN18958.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698580|gb|ACN18960.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698583|gb|ACN18962.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698586|gb|ACN18964.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698589|gb|ACN18966.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698592|gb|ACN18968.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698595|gb|ACN18970.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698598|gb|ACN18972.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698601|gb|ACN18974.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698604|gb|ACN18976.1| histidyl-tRNA synthetase [Listeria monocytogenes]
          Length = 120

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 3/118 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+ ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHG 121
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+  
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQ 118


>gi|315425704|dbj|BAJ47360.1| histidyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 349

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 156/376 (41%), Gaps = 38/376 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E PRG  D   +E  ++ RI+D IR IY  YG++ +ETP LEY +       +E R 
Sbjct: 1   MSFEPPRGMDDLLPEEFAVKQRIVDVIREIYRLYGYEEVETPTLEYLELFEAKSGEEIRH 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F   D  G+ + LR ++TA +AR VA        P R   I   +R ++   GR R
Sbjct: 61  R--MFVFDDPHGRKLVLRPEVTASVARLVASKLSRRPLPLRLGYIADCYRYDEPQWGRRR 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  ++  GS    +DAE+ +   D  + +G+   +    I +  I+ GI+       
Sbjct: 119 RFWQGGLELFGSRDPMSDAEIILASRDVFQRLGLV--EQRFKIGHVGIMRGIM------- 169

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                         D +++     +  L+       +    +   L  + ++ +      
Sbjct: 170 --------------DNVEQKTQDIILSLIDRKMFTEARQLMEQH-LDKDAVETLWRLAEH 214

Query: 247 DLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + +    ++V       +    L  I   +  +   +  I++     RGLEYYTG 
Sbjct: 215 RGGLEVVERARDMVSPWPKAMQSLENLETIVS-LIMNVDPNISIEVDLGFARGLEYYTGM 273

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           ++E          ++      S  GGGRYDGLV  F G+  PA G SIGI+R+ + L   
Sbjct: 274 IFE----------QKLEGEQLSFNGGGRYDGLVELFGGKPTPAVGCSIGITRIQMHLLGR 323

Query: 366 ESSTNNIKEMGPVLIT 381
           ++ T    +       
Sbjct: 324 KTQTTPFPQQSFSQYY 339


>gi|167767303|ref|ZP_02439356.1| hypothetical protein CLOSS21_01822 [Clostridium sp. SS2/1]
 gi|167711278|gb|EDS21857.1| hypothetical protein CLOSS21_01822 [Clostridium sp. SS2/1]
 gi|291559388|emb|CBL38188.1| ATP phosphoribosyltransferase regulatory subunit
           [butyrate-producing bacterium SSC/2]
          Length = 393

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 75/409 (18%), Positives = 153/409 (37%), Gaps = 44/409 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK   R   P G  D    E   R+++   +  ++ +YG++ I TP  E+ D      
Sbjct: 1   MNKK---RVHTPEGVRDVYGTEYGQRSKLKAKLNKVFASYGYEGIRTPGFEFFDVFN--S 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + +F   D +G  + LR D+T  +AR +A+ F+      R    G VF N   
Sbjct: 56  EKGTVSAREMFKFFDREGNTLVLRPDVTPSIARCIAKYFNEENMGIRLSYAGNVFLNNSS 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              + ++  Q   + V  ++  AD E   M  D   A G+   D+ + I   +  +G+ +
Sbjct: 116 YQLKLKETCQLGAELVNDASVQADTESIAMAIDCFLAAGLT--DFRLSIGEVEFFNGLTQ 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            I                            ++ L+         ++ +  +L+ +  D+ 
Sbjct: 174 TIKDEE--------------------VKTQLRELILNKNYFGLMEYVETLDLSDKIKDVF 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + F  ++ + ++ +  E +      +K    L  +  +++  G     +     ++    
Sbjct: 214 LHFNELNGDVAILDQAEAMVENEQSKKAIKRLRDVYGILKLYG-KEQYVSFDLGMLNKHN 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++                  +V  GGRYD L+ +F  +  P+ GF+I +  L++
Sbjct: 273 YYTGIIFKGYT----------YGTGDAVLKGGRYDNLIEQFG-KKAPSVGFAIVLDELMM 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           AL               ++         ++    +  + LR  G +  +
Sbjct: 322 ALSRQGIHMEADHMDTMIIY-----KEATMKDAILRAEELRKEGKKVIL 365


>gi|225572184|ref|ZP_03781048.1| hypothetical protein RUMHYD_00478 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040356|gb|EEG50602.1| hypothetical protein RUMHYD_00478 [Blautia hydrogenotrophica DSM
           10507]
          Length = 376

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 88/411 (21%), Positives = 153/411 (37%), Gaps = 44/411 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
               P G  D   +E R +  I   IR I+  YGF  IETP  E+ +   + +     P+
Sbjct: 6   IFHTPEGVRDICQEECRQKLLIQKKIRRIFHLYGFQDIETPTFEFFEVFSREVGTT--PS 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++   D +G  + LR D T  +AR     F   + P R    G  F N     GR ++
Sbjct: 64  KELYKFFDREGNTLVLRPDFTPSIARCAVSCFPLNMEPVRLCYAGNTFVNNSSFQGRMKE 123

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q   + +G S+  ADAEM  M+ + L   G++  D+ I +        +LE      +
Sbjct: 124 ATQMGAERIGDSSSDADAEMLAMVVNCLLETGLR--DFQISVGEVNFFKALLEDAKKDDE 181

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +                     ++ L+         +  +G NL  E  +       + 
Sbjct: 182 MER-------------------KLRELISNKNNFGVEELIRGQNLPKELENAFFQLPYLF 222

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +  + +  + +       +  + L  I E+++  GY  N +     ++    YYTG ++
Sbjct: 223 GDAEILKKAKKLTSNQRAIRAIHRLEEIYEILKCYGY-ENYVTFDLGMLSKYRYYTGIIF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +A                  +  GGRYD L+  F  +   A+GF I I +L++AL     
Sbjct: 282 QAYT----------YGTGEPIVKGGRYDNLLEHFG-KAAAASGFGISIDQLMLALSRQNI 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                +E        + +  ++     +    LR  G R  +     K  G
Sbjct: 331 PVTVPEEEE----IILSYTIENRRDAIVQAVNLRREGKRVIL-----KKLG 372


>gi|225028537|ref|ZP_03717729.1| hypothetical protein EUBHAL_02816 [Eubacterium hallii DSM 3353]
 gi|224954138|gb|EEG35347.1| hypothetical protein EUBHAL_02816 [Eubacterium hallii DSM 3353]
          Length = 413

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 114/447 (25%), Positives = 189/447 (42%), Gaps = 56/447 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++    +G  D    +  +RN +   I   YE  GF  I TP++E  ++L K     D  
Sbjct: 1   MKITPVKGTNDYLPAQAELRNYLQKKICETYEQAGFQRIATPIIEDIENLDKS-EGGDNL 59

Query: 67  NKGVFSLQDDDGQ--------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
           N  +F +     +               + LRYDLT PL+RY A N  ++  P +  ++ 
Sbjct: 60  N-LIFKVMKRGEKLKKAIASQNPDNIADMGLRYDLTLPLSRYYANNRASLPQPFKVIQMD 118

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GR R+FIQCD+D +GS + T + E+    A  L  +G   N++ + IN+R
Sbjct: 119 RVYRAERPQKGRLREFIQCDIDILGSDSSTCEIELIHTTAKALLNIG--INNFKVKINDR 176

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           +IL  IL  +G   D    +   V  + DKL+K   +GV+  L E   D +        L
Sbjct: 177 RILREILLSVGFEED----QLDSVCISFDKLNKIKAEGVEAELTEKGFDKAVIAEFMKLL 232

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
           +             +   ++  + E+ K +    +  + L  I +            +  
Sbjct: 233 S-------------NAPFTLDYVKEICKNS----EYVDSLAYIIDTSNALADGKYVAEYD 275

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            T+VRG  YYTG V+E                  S+ GGGRYD L+ +F  + +PA GFS
Sbjct: 276 MTLVRGQGYYTGTVFEVESLDFN----------SSIAGGGRYDNLIGKFLKEQIPAVGFS 325

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG  R+   L   ES     ++        + ++ D ++    Y + LR    +  +++ 
Sbjct: 326 IGFERIYSILMEKESYNTEKQKK-----VVLIYEEDQVADAIRYAEELRKT-YKTALYIK 379

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGE 439
             K  G  L   + +      + G  E
Sbjct: 380 -PKKLGKFLNKLEEQGFDGFQVFGRDE 405


>gi|114567285|ref|YP_754439.1| histidine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338220|gb|ABI69068.1| ATP phosphoribosyltransferase regulatory subunit [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 387

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 86/404 (21%), Positives = 165/404 (40%), Gaps = 46/404 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG  D    E+++R  + +    ++ +Y ++ + TP  EY + +           + +F 
Sbjct: 8   RGLRDLLPPELKVRRFMEEKAAALFASYAYEEVMTPTFEYLEVVEMGTGG--NIREELFL 65

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             D +G  +SLR ++T  +AR  A +    VFP R Y +   FR  +    ++R+F Q  
Sbjct: 66  FMDREGGILSLRPEMTTGIARLAATHLRDAVFPQRLYYLSNSFRYVQPHLAQYREFWQAG 125

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           ++ +G+    ADAE+  +    L+ +G+  +++ I +N   I + +L+  GL+ ++K   
Sbjct: 126 IELLGAEGVRADAEVITIAVKALQEMGL--DNFKISLNQIAIFNSLLDDSGLNREEKDC- 182

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                             ++ L+            +  ++  E  + +     +     +
Sbjct: 183 ------------------IRSLVENKDLVELSRVLESLDIDDELKETIAILPVLHGGIEV 224

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +    V+          EL  + E ++  G   + I +   ++RGL+YYTG V+E    
Sbjct: 225 LKRLPYVEKNQRALAAVQELREVYETLQLCGV-IDHIVVDMGVLRGLDYYTGTVFEGY-- 281

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                    P +   + GGGRYD L+ +F     PATGF++G+ RL + LK         
Sbjct: 282 --------SPELGYGLLGGGRYDHLLGKFGF-PCPATGFALGMDRLALLLKHPALQKAP- 331

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                        D    +      + LR  G   E+ +   K+
Sbjct: 332 ------RYLVGGKD---FAAVIARAEELRKQGFAVEIDV-EGKS 365


>gi|223698514|gb|ACN18916.1| histidyl-tRNA synthetase [Listeria monocytogenes]
          Length = 120

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 3/118 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+ ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDVLPEEVSKWHFLETEFKNVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHG 121
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+  
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQ 118


>gi|116515113|ref|YP_802742.1| hypothetical protein BCc_177 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256967|gb|ABJ90649.1| histidyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 425

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 97/457 (21%), Positives = 175/457 (38%), Gaps = 55/457 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
               RG  D    +    NRI   I+NI  +Y F  I  P++E +    K +  D D  N
Sbjct: 5   YRSIRGMHDLFFLDTYELNRIEVIIKNIVHSYAFSEIRLPIVEETRLFTKAIGNDTDIIN 64

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFD-TIVFPCRTYRIGPVFRNEKHGPGRFR 126
           K +++  D   + ISLR + T    R   +N         + +  GP+FR E+   GRFR
Sbjct: 65  KEMYNFYDKKKKKISLRPEGTVGCIRACIQNNIFYQSQIQKFWYHGPMFRYERPQKGRFR 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  ++  GS    +D E+ ++  +  + + I +       +   I D +   + L+ 
Sbjct: 125 QFHQFGIELFGSKNIISDYELIILTINIWKKLNILKYLTLEINSIGSIEDRVKYSLDLNS 184

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K N   I       L       ++LL  +                 +   I+ ++L++
Sbjct: 185 FLKKNIHKIKKNKKKILLNNS---IRLLDNKDIYIKK---------LLKSAPILKNYLNL 232

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                  +L  L+                        Y   +  I+  +VRGL+YY   V
Sbjct: 233 QSCIRFKKLCNLL-----------------------HYFKIKFIINKKLVRGLDYYNDTV 269

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E         +        ++  GGRYD LV    G++ PA G +IG+ RL++ +KS+ 
Sbjct: 270 FEW--------KSNLLGSKNTICAGGRYDHLVKFLGGKDNPAIGVAIGMDRLLLLIKSIY 321

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR----TAGIRAEMFLGSSKNFGNQLK 422
            +  N      + +  +  +S  L      ++ LR       I   + +   KNF    K
Sbjct: 322 LNKYNFF---LIDVNIIFLESIYLKLAIKISEELRVLWPVLKINTCLNIIKKKNF---FK 375

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           Y+        +I  +       + + +++K ++ +  
Sbjct: 376 YSKTSKSKYLLILSSTFLKNNKIHLINISKKEKKTIN 412


>gi|304316059|ref|YP_003851204.1| histidyl-tRNA synthetase 2 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777561|gb|ADL68120.1| histidyl-tRNA synthetase 2 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 386

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 83/411 (20%), Positives = 173/411 (42%), Gaps = 42/411 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D   +E+R ++ I + +R  +E+ G++ I  P  EY ++              +
Sbjct: 4   LPDGVQDFLPEELRFKHSIENILRKTFESSGYEEIMPPTFEYMENFSNTSG-IFFDENNL 62

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D  G  ++LR D+T  +AR  +  ++      +   I  V+R +    GR R++ Q
Sbjct: 63  YRFFDKKGDLLALRPDVTTQVARIASTKYNEYP--LKFCYIANVYRYDNPQVGRMREYTQ 120

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G + E +DAE   +  + L+ +GIK  D+ + I   +    +L+ +        
Sbjct: 121 AGIELIGKNHEYSDAECISVAVEALKNIGIK--DFKVDIGQAEFFKSLLDDL-------- 170

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                       L +   Q +K LL +        F K  N+T    +++V+      + 
Sbjct: 171 -----------GLARNEEQVLKELLEQKNQSEIEYFLKNNNITGHNYELIVNLPLFFGDI 219

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + +  + V       +  N L  + ++++  G +   I     +V+ ++YYTG ++   
Sbjct: 220 EIIKKAKDVYKFEKANRTLNYLERVYDILKDFGMDK-YITFDLGMVQSIDYYTGLIFRIF 278

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +               ++  GGRYD L+  +  +++PATGF+I + R ++A+++      
Sbjct: 279 VKDLGY----------AICAGGRYDNLLKNYG-KDLPATGFAISVERAMLAVQNQSEKFT 327

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN-FGNQ 420
              +   VL      +  S  +       LR  G  AE+ +  +++    +
Sbjct: 328 KKPKSVAVLC-----NDSSRKEAYHIALKLRNEGNIAELVIKGNEDYLKKK 373


>gi|223698238|gb|ACN18732.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698298|gb|ACN18772.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698301|gb|ACN18774.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698352|gb|ACN18808.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698385|gb|ACN18830.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|223698511|gb|ACN18914.1| histidyl-tRNA synthetase [Listeria monocytogenes]
          Length = 120

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 3/118 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+ ENY ++ I+TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENYQYEEIKTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHG 121
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+  
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQ 118


>gi|218133998|ref|ZP_03462802.1| hypothetical protein BACPEC_01888 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991373|gb|EEC57379.1| hypothetical protein BACPEC_01888 [Bacteroides pectinophilus ATCC
           43243]
          Length = 421

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 115/433 (26%), Positives = 189/433 (43%), Gaps = 48/433 (11%)

Query: 9   AELP-RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
            + P +G  D    ++R+R  +++ I+  Y  YGF  IETP++E+  +L GK   +    
Sbjct: 4   IKTPIKGMNDFLPSDMRLREHVINMIKETYATYGFSLIETPVMEHLGNLTGKQGGEN--- 60

Query: 67  NKGVFSLQDDD---------GQWI---SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            K +F +             G  +   +LRYDLT PL+RY A N   +  P ++ +IG V
Sbjct: 61  EKLIFPVMKRGADLQRAIENGGELADSALRYDLTVPLSRYYANNQAVLTTPFKSLQIGNV 120

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN--DYHIGINNR 172
           FR ++   GRFRQF QCD+D +G S+  A+ E+       L  +  +     + + +N+R
Sbjct: 121 FRADRPQKGRFRQFTQCDIDILGDSSILAEIELIAATTSMLTKIFEEVGISRFTVHVNDR 180

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           +IL G+ +  G   +        V   +DK+DK G+ GVK  L +               
Sbjct: 181 RILKGMAKSAGFDEES----FDTVFIILDKMDKIGIDGVKEELVKS------------GF 224

Query: 233 TSEQIDIMVS-FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            ++ ++     F  I    S  +   L+          + L  I   V+    +   +  
Sbjct: 225 AADAVEKYTQMFTKITEGISCGDFCSLIGADAIDSSVVDSLDGILSCVKPMISSDVSLVF 284

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E  +     +          + GGGRYD ++ +F GQ V A GF
Sbjct: 285 DPTLVRGMSYYTGTIFEITIDGYNFS----------IAGGGRYDEMIGKFCGQKVCACGF 334

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDH-DSDSLSKYQMYTQMLRTAGIRAEMF 410
           SIG  R+I  LK         ++   + I       +D L+        LR  G    + 
Sbjct: 335 SIGFERIITILKDKLGDKAFARDKKCIAILVDSKVSTDKLADVFAEATKLREQGNIVTVQ 394

Query: 411 LGSSKNFGNQLKY 423
              +KN   Q++ 
Sbjct: 395 P-LNKNAKFQIQK 406


>gi|260437123|ref|ZP_05790939.1| ATP phosphoribosyltransferase, regulatory subunit [Butyrivibrio
           crossotus DSM 2876]
 gi|292810435|gb|EFF69640.1| ATP phosphoribosyltransferase, regulatory subunit [Butyrivibrio
           crossotus DSM 2876]
          Length = 386

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 81/400 (20%), Positives = 150/400 (37%), Gaps = 40/400 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E   R  + D I  +++ YG+  I+TP  E+ D   +        +K +
Sbjct: 8   TPDGVRDIYNGECEERLILRDKIHRVFKLYGYSDIQTPSFEFFDVYNR--ERGSVSSKNM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D D   I LR D+T  +AR  A+ F++   P R   IG  F N     GR  +  Q
Sbjct: 66  YKFFDRDNNTIVLRPDMTPSIARCAAKYFESEQNPVRLCYIGNNFINNSSYQGRLMETTQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              + +G S+  ADAEM   + +++ + G+      +   +     GI  + GL GD   
Sbjct: 126 AGCELIGDSSSAADAEMIAALIESILSTGLTEFQVEV--GHVGFFSGITAEAGLTGD--- 180

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                            +  +K ++      +        N+  +  DI      +  + 
Sbjct: 181 ----------------SIAELKEIIRNKNLFSIEALLTRENIDEKYNDIFYRLPQMFGDV 224

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           ++      +          + L  + ++++  GY    +     ++  L+YYTG +++A 
Sbjct: 225 NILSQAASMTKNETALSAISHLEEVYDILKDYGY-EKYVSFDLGVLSELDYYTGVIFKAY 283

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                            +  GGRYD L+ +F  ++  + GF I I  L +A+   +    
Sbjct: 284 TFDVG----------EPIANGGRYDNLIGQFG-KDKASIGFCITIDLLHLAIIRQKIVVV 332

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
              +        + +D  +L +       LR  GI   + 
Sbjct: 333 KPTKNR-----LIVYDESNLKEAVRLAGKLRKEGINTVLS 367


>gi|149017271|gb|EDL76322.1| rCG49571, isoform CRA_c [Rattus norvegicus]
          Length = 408

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 28/307 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     ++P+G  D   +++ +R +ILD I + ++ +G   ++TP  E  + L +   D 
Sbjct: 53  KPNFIIKVPKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDN 112

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-- 121
                 ++ L+D  G+ +SLRYDLT P ARY+A N    +      ++G V+R E     
Sbjct: 113 FGL---MYDLEDQGGELLSLRYDLTVPFARYLAMNKLKRMKRY---QVGKVWRRESPAIV 166

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G          C+ +   + + G++  D+ I +N+R+++DG+   
Sbjct: 167 QGRYREFCQCDFDIAGEFDPMIPDAECLRIMCEILS-GLQLGDFLIKVNDRRVVDGMFAV 225

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  ++DKLDK   + V+L           +   G  L  E  D + 
Sbjct: 226 CGVPES----KFRTICSSMDKLDKMSWEDVRL-----------EMVAGKGLAPEVADRIG 270

Query: 242 SFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++      S+ E       +  +    +G  +L ++ E +R  G  +++I         
Sbjct: 271 DYVQCHGGISLVEELFKDPRLSQSQLALQGLGDLKLLFEYLRLFGI-ADKISCEKVRTTE 329

Query: 299 LEYYTGC 305
            + +   
Sbjct: 330 TQVFVAT 336



 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 41/91 (45%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +  +          +       + L +       L  AGI+AEM   ++     QL Y +
Sbjct: 318 DKISCEKVRTTETQVFVATPQKNFLQERLKIIAQLWDAGIKAEMLYKNNPKLLTQLHYCE 377

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           + + PL +I G  E++ G+++++ +A  +E+
Sbjct: 378 KEDIPLMVIIGEQEQNEGVVKLRSVASREEV 408


>gi|291523617|emb|CBK81910.1| histidyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 421

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 110/439 (25%), Positives = 180/439 (41%), Gaps = 41/439 (9%)

Query: 7   LR-AELP-RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
           ++  + P +G  D    ++R+R  IL  I+  Y +YGF  IETP++E+ ++L      ++
Sbjct: 1   MKFIKTPVKGMCDMLPADMRLREHILQMIKTSYASYGFMQIETPVMEHIENLTSKQGGDN 60

Query: 65  RPNKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRI 111
              K +F +                      LRYDLT PLARY A N + +  P +  +I
Sbjct: 61  --EKLIFKVMKRGADLTRAIEAGKQEFADNGLRYDLTVPLARYYANNKEKLPTPFKALQI 118

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
           G V+R +    GRFRQF QCD+D +G     A+ E+    +D L  +  +       I+ 
Sbjct: 119 GNVWRADNPQKGRFRQFTQCDIDILGDDTNLAEIELIAATSDMLSQIFSEVGITDFTIHI 178

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
                 IL    L    +      VL ++DK DK GL+G++  L E            A 
Sbjct: 179 ND--RQILRAAALQAGFEEEAIGSVLISLDKYDKIGLEGIRRELIENGYAEDVVTRYLAI 236

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
                      + S+  + +  +    +       K    +  I    +       +I  
Sbjct: 237 -----------YESLQGDVTCGDFCSDIAENYLDRKVVEGVDDIISCAKAMINEHVKITF 285

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E  +     +          + GGGRYD ++ +F GQ+V A GF
Sbjct: 286 DPTLVRGMGYYTGTIFEISIDGYNFS----------IAGGGRYDKMIGKFCGQDVSACGF 335

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG  R+I  LK    +   + E    ++   +   D   +     + LR  G    +  
Sbjct: 336 SIGFERIITILKDKLETVTPVSEKNLAILIGKNVPLDRKLEIFKRAKALRAEGTTVTIQP 395

Query: 412 GSSKNFGNQLKYADRRNCP 430
              KN   Q++  +     
Sbjct: 396 -MRKNMKQQIEKLEAEGFK 413


>gi|258514060|ref|YP_003190282.1| histidyl-tRNA synthetase 2 [Desulfotomaculum acetoxidans DSM 771]
 gi|257777765|gb|ACV61659.1| histidyl-tRNA synthetase 2 [Desulfotomaculum acetoxidans DSM 771]
          Length = 389

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 162/408 (39%), Gaps = 44/408 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKF 59
           M  K +    +P G  D    E   +  I      +   +G+  + TP+ EY +  L K 
Sbjct: 1   MALKDRFG-RVPPGVRDLLPAEAGTKREIETKFAQLVHAWGYQEVSTPIYEYYENILVKE 59

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              ED+    +F   D +G  + LR D+T P+AR  A    T   P R +  G  F  E 
Sbjct: 60  SSQEDK----LFKFLDRNGHLLVLRPDMTLPIARLAATGLKTETLPLRLFYTGHAFLYES 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR R+F Q  V+ +G S+  ADAE  ++   +L AVGI+     I + +  I  G+ 
Sbjct: 116 PQAGRQREFYQAGVEILGDSSADADAETVILAVKSLLAVGIQEFQ--ISLGHVGIFHGLA 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           + +GL   +K                   + +K  +G        +      +       
Sbjct: 174 DDLGLPVVEK-------------------EELKTAIGNKDFVLLRELLSRFMIAPADQSR 214

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++  L++     +      + G    +   + L  I  +++  G   +++ +   ++R L
Sbjct: 215 LLKVLNLRGSAKVLVEARQLIGGGRAQSALDNLEEIYAVLQAYGV-ESQVTLDFGLLREL 273

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG V+E   G               + GGGRYD L  +F   ++PATGF++G+ +L+
Sbjct: 274 DYYTGAVFEGYTGSLGF----------PLCGGGRYDNLTGQFGY-DLPATGFALGVDKLM 322

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           + L    +               + +  +  S+       LR AG   
Sbjct: 323 LVLDRQGALNRE-----VCCDYLIRYTREQRSEAVRQAGELRQAGYTV 365


>gi|223698304|gb|ACN18776.1| histidyl-tRNA synthetase [Listeria monocytogenes]
          Length = 120

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 3/118 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    +N+ ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHG 121
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y    +FR E+  
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNESMFRYERPQ 118


>gi|148664764|gb|EDK97180.1| histidyl-tRNA synthetase-like, isoform CRA_a [Mus musculus]
          Length = 424

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 73/288 (25%), Positives = 131/288 (45%), Gaps = 27/288 (9%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     ++P+G  D   +++ +R +ILD I + ++ +G   ++TP  E  + L +   D 
Sbjct: 51  KPNFVIKVPKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDN 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--G 121
                 ++ L+D  G+ +SLRYDLT P ARY+A N        + Y++G V+R E     
Sbjct: 111 FGL---MYDLKDQGGELLSLRYDLTVPFARYLAMNKL---KKMKRYQVGKVWRRESPAIA 164

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR+R+F QCD D  G          C+ +   + + G++  D+ I +N+R+++DGI   
Sbjct: 165 QGRYREFCQCDFDIAGEFDPMIPDAECLRIMCEILS-GLQLGDFLIKVNDRRVVDGIFAV 223

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+       +   +  ++DKLDK   +GV+            +      L  E  D + 
Sbjct: 224 CGVPES----KLRTICSSMDKLDKMSWEGVR-----------HEMVAKKGLAPEVADRIG 268

Query: 242 SFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNS 286
            F+      S+ E       +  +    +G  +L ++ E +R  G   
Sbjct: 269 DFVQYHGGISLVEDLFKDPRLSQSQLALQGLGDLKLLFEYLRLFGIAD 316



 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 18/127 (14%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +  +          +       + L +       L  AGI+AEM   ++     QL Y +
Sbjct: 316 DKMSGEKVRTTETQVFVATPQKNFLQERLKIIAELWDAGIKAEMLYKNNPKLLTQLHYCE 375

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           + + PL +I G  ER+ G+++++ +A  +E+                  TI    LV+ +
Sbjct: 376 KADIPLMVIIGEQERNEGVIKLRSVASREEV------------------TINRESLVAEI 417

Query: 486 KKILQEN 492
           +K L E+
Sbjct: 418 QKRLSES 424


>gi|326505204|dbj|BAK02989.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 416

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 90/375 (24%), Positives = 162/375 (43%), Gaps = 37/375 (9%)

Query: 90  PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCM 149
            LAR V +   ++  P + + IG  +R E+   GR R+  Q ++D  G     A+AE+  
Sbjct: 79  SLARLVIKQGKSVSLPLKWFTIGQCWRYERMTRGRRREHYQWNMDIFGMPKVRAEAELIQ 138

Query: 150 MMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQ 209
            +    E +GI  +D  I +++RK+L  +L+   +      +    V   +DKL K   +
Sbjct: 139 AIVLLFERLGITSSDVGIRLSSRKVLQAVLDMYSVP----QHLFTQVCVIVDKLGKLSRE 194

Query: 210 GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGF 269
            ++  L                L+SE +  ++  LS+     + E+        +G +  
Sbjct: 195 EIEKELIST------------GLSSEAVQGIIEVLSLKSLDKLEEVL------GSGVEAV 236

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
            +L  +     + GY ++ I   +++VRGL YYTG V+EA           +     ++ 
Sbjct: 237 ADLKKLFSFAEQYGY-ADWICFDASVVRGLAYYTGIVFEAF---------DREGELRAIC 286

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
           GGGRYD L+S F  ++VPA GF  G + ++  LK      +  +++  +       D + 
Sbjct: 287 GGGRYDRLLSTFGTEDVPACGFGFGDAVIVELLKEKGLLPDLSRQIDDI---VFPLDEEL 343

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
                     LR  G   ++     K      K+A+R N    I+ G  E  RGM+++K 
Sbjct: 344 EGPASSVASSLRKKGRSVDLV--EDKRLKWVFKHAERINASRLILVGKSEWERGMVRVKI 401

Query: 450 LAKGKELSREIKNNE 464
           L+  +E   +    +
Sbjct: 402 LSTREEFEVKAGELQ 416


>gi|194383532|dbj|BAG64737.1| unnamed protein product [Homo sapiens]
          Length = 395

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 76/340 (22%), Positives = 140/340 (41%), Gaps = 21/340 (6%)

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
           + +    +   +         ++  D+ + +N+R+ILDG+    G+       +   +  
Sbjct: 67  NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDS----KFRTICS 122

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL--- 255
           ++DKLDK   + VK            +      L  E  D +  ++      S+ E    
Sbjct: 123 SVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQ 171

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +       +G  +L ++ E +   G   ++I    ++ RGL+YYTG +YEA+L    
Sbjct: 172 DPKLSQNKQALEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGLDYYTGVIYEAVLLQTP 230

Query: 316 MNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+   ++    +     
Sbjct: 231 AQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKI 290

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +         L +       L  AGI+AE+    +    NQL+Y +    PL  
Sbjct: 291 RTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVA 350

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 351 IIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 390


>gi|189426301|ref|YP_001953478.1| ATP phosphoribosyltransferase regulatory subunit [Geobacter lovleyi
           SZ]
 gi|189422560|gb|ACD96958.1| Histidine--tRNA ligase [Geobacter lovleyi SZ]
          Length = 429

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 88/433 (20%), Positives = 166/433 (38%), Gaps = 43/433 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   LPRG AD         + +   + ++   +GF  I  P LE+ D L   + +  R 
Sbjct: 6   IDTSLPRGVADYLPGRAARLSELEQQVLHVATAWGFQQILPPALEFEDVLAIGMGEGLRS 65

Query: 67  NKGVFSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               F   D   G+ +++  D+T  +AR VA      + P R    G V R+ +   GR 
Sbjct: 66  R--TFRFDDWQSGRLLAIPPDITPQIARIVATRMKGQLLPYRISYAGRVLRHAELQSGRN 123

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+ +Q  V+ +G  +  ADAEM  M  + ++A   K  D+ + +       G+    GLH
Sbjct: 124 REIMQAGVELIGLDSPEADAEMVAMAVEVMKA--AKLRDFKVDLGQVGFCQGVFAASGLH 181

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
           G+                    L+ V+  +                + ++    ++S   
Sbjct: 182 GE-------------------PLRLVREAVSLKDVSAVKMLLMRYPVAADSHQELISLTR 222

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +     +      V   +        +  + +++   G   + + I     RGL+Y+TG 
Sbjct: 223 LFGGSEVLVEAARVVHNVRSRAALQNIAEVVQILAMHGV-EDCLSIDLGETRGLDYHTGL 281

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E  +          P +  +V  GGRYD L+ R+   + PATGF+  +  L+ AL+  
Sbjct: 282 TFEGFV----------PGIGEAVFSGGRYDDLIGRYGF-DAPATGFTCNLFSLMQALELQ 330

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +  +  ++        + + +D  S+    ++ LR  G      +   ++    L YA 
Sbjct: 331 GTRQHEQRD------LLVFNGADDRSEALELSRELRQRGYAVARDII-KRDLDASLCYAA 383

Query: 426 RRNCPLAIIQGTG 438
                  ++ G  
Sbjct: 384 EAGIRAVLVIGNN 396


>gi|194375508|dbj|BAG56699.1| unnamed protein product [Homo sapiens]
          Length = 435

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 76/340 (22%), Positives = 140/340 (41%), Gaps = 21/340 (6%)

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
           + +    +   +         ++  D+ + +N+R+ILDG+    G+       +   +  
Sbjct: 107 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDS----KFRTICS 162

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL--- 255
           ++DKLDK   + VK            +      L  E  D +  ++      S+ E    
Sbjct: 163 SVDKLDKVSWEEVK-----------NEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQ 211

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +       +G  +L ++ E +   G   ++I    ++ RGL+YYTG +YEA+L    
Sbjct: 212 DPKLSQNKQALEGLGDLKLLFEYLTLFGI-DDKISFDLSLARGLDYYTGVIYEAVLLQTP 270

Query: 316 MNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+   ++    +     
Sbjct: 271 AQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKI 330

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +         L +       L  AGI+AE+    +    NQL+Y +    PL  
Sbjct: 331 RTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVA 390

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 391 IIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 430



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 28/51 (54%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD 54
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  D
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKD 101


>gi|260437932|ref|ZP_05791748.1| histidine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809683|gb|EFF68888.1| histidine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 420

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 119/421 (28%), Positives = 187/421 (44%), Gaps = 46/421 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D   KE++IR+ ++  I+  Y  +GF  IETP +E   +L      E+   K +F +
Sbjct: 10  GMKDILPKEMQIRDYLIGIIKETYSKFGFTSIETPAVENIANLSSKQGGEN--EKLIFKI 67

Query: 74  QDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                +                LRYDLT PL R+ + N  ++  P +  +IG V+R ++ 
Sbjct: 68  MKRGEKLNLESASSEADLVDGGLRYDLTVPLVRFYSNNQASLPSPFKALQIGSVWRADRP 127

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFRQF QCD+D +G     A+ E+ +    TL  +G K  ++ I IN+R+IL  +  
Sbjct: 128 QKGRFRQFYQCDIDILGEPTNLAEIELILATTTTLGRIGFK--NFKIKINDRRILKAMAA 185

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS-EQIDI 239
             G   +        V   +DK+DK G++GVK  L     D +      +     E+ D 
Sbjct: 186 YSGFAEES----YDNVFIILDKMDKIGIEGVKEDLIANGYDAASVEKYVSLFDGIEKADN 241

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            + +L+  + + + +            +  + L+ I E V  +      I    T+VRG+
Sbjct: 242 GLLYLADTIAEFLPD------------EAKDNLLEIIESVNGTKNCDFDIVFDPTLVRGM 289

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            YYTG ++E  +          P    SVGGGGRYD +V +F GQ  PA GFSIG  R+I
Sbjct: 290 SYYTGTIFEIEV----------PEFGSSVGGGGRYDKMVGKFTGQETPACGFSIGFERII 339

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGSSKNFG 418
             L    +     +      +      S+ L       Q LR  GI+  +  +  +K F 
Sbjct: 340 TILMD-NNFEIPNQGNSIAFLVEKGIQSEMLCNIIKEAQKLREEGIKVLVVRMNKNKKFQ 398

Query: 419 N 419
            
Sbjct: 399 K 399


>gi|319650544|ref|ZP_08004684.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus sp.
           2_A_57_CT2]
 gi|317397725|gb|EFV78423.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus sp.
           2_A_57_CT2]
          Length = 394

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 88/408 (21%), Positives = 164/408 (40%), Gaps = 45/408 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D        +  +  SI+   + +G+  IETP LEY +++G         ++
Sbjct: 7   FEKPLGMRDTLPDLYERKAAVRSSIQEEMKRWGYQFIETPALEYYETVGAASA---ILDQ 63

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D  G  + LR D+TAP+AR  A        P R      V+R ++   GR  +F
Sbjct: 64  QLFKLLDQQGHTLVLRPDMTAPIARVAASRLLKDELPIRLAYSANVYRAQQREGGRPAEF 123

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G    +AD E   MM   L+  G++  ++ +   +   +    ++I    + 
Sbjct: 124 EQIGVECIGDHTISADGEGMAMMISALKEAGLQ--NFQLSAGHIGFVRDFFQQILGTEER 181

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                              ++ +   L E       +  K   L+S     ++ FL +  
Sbjct: 182 -------------------VENLTRYLYEKNYVGYREHVKSLALSSIDKQRLLDFLKLRG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + E+   +     G+K   EL  +  +++  G     +K   T+V  + YYTG ++E
Sbjct: 223 GEEVIEIAYGLLENGTGKKALAELEQLWGIMQDYGQ-EGTVKFDLTLVSHMSYYTGILFE 281

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                              +G GGRYD L+ +  G++  ATGF+I + RL+ AL+   ++
Sbjct: 282 VYAENVGF----------PIGNGGRYD-LLLQKFGKDTGATGFAIRMDRLLEALEDSNAA 330

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                      +  + +  +   +   + +  R+AG +  +   S   
Sbjct: 331 E---------PVYCVLYSPERRKEAFDFAKKERSAGKKVVLQDISGVK 369


>gi|79326851|ref|NP_001031826.1| ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/
           nucleotide binding [Arabidopsis thaliana]
 gi|332003215|gb|AED90598.1| ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/
           nucleotide binding protein [Arabidopsis thaliana]
          Length = 263

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/183 (25%), Positives = 95/183 (51%), Gaps = 2/183 (1%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
             +    P+G  D P +++R+RN + +  + +   +G++ ++ P+LE      +   +E 
Sbjct: 65  QNIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLFGYEEVDFPVLETEALFIRKAGEEI 124

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           R    ++  +D   + ++LR +LT  LAR V +   ++  P + + +G  +R E+   GR
Sbjct: 125 RD--QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGR 182

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q ++D +G    TA+AE+   +    + +GI  +D    +++RK+L   L+K G+
Sbjct: 183 RREHYQWNMDIIGVPEVTAEAELISSIMTFFKRIGITASDVGFKVSSRKVLQEFLKKYGV 242

Query: 185 HGD 187
             D
Sbjct: 243 PED 245


>gi|255505899|ref|ZP_05348784.3| ATP phosphoribosyltransferase, regulatory subunit [Bryantella
           formatexigens DSM 14469]
 gi|255265254|gb|EET58459.1| ATP phosphoribosyltransferase, regulatory subunit [Bryantella
           formatexigens DSM 14469]
          Length = 376

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 84/403 (20%), Positives = 150/403 (37%), Gaps = 40/403 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E   + R+   + ++ ++YG   IETP  E+ D  G  +     P++ +
Sbjct: 12  TPEGVRDIYNGECERKLRLQKDLHDVLKSYGCRDIETPTFEFFDVFGSDVG--TIPSREL 69

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D +G  + LR D+T  +AR V++ F+      R    G  F N     GR ++   
Sbjct: 70  YKFFDREGNTLVLRPDITPSIARAVSKYFNDGQEVLRLCYEGKTFINHSSYQGRLKENTH 129

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              + +G+    ADAE+  M+ D L+  G+   ++ I I   +    IL+ + +  + + 
Sbjct: 130 IGAEMIGADNAQADAEIIAMVVDCLKKAGL--EEFQISIGQVEYFKSILKDVDIPEETE- 186

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                     D +    L GV+ LL             G  +   Q + ++S  S+    
Sbjct: 187 ------CELKDFISNRNLFGVESLLA------------GMEMGERQKEALLSLPSLYGSV 228

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E    +    +       L  I +++   G     I    +++    YYTG  +   
Sbjct: 229 EILEKAYALSCNESARHAIARLKEIYQILEFYGVTR-YISFDLSMLSRYNYYTGIFFRGY 287

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                           +V  GGRYD L++ F  +N P+ GF +    L+ AL+    +  
Sbjct: 288 TF----------GTGDAVVKGGRYDNLLAHFG-KNAPSIGFVVVADELLAALERQNIAPE 336

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
             +    +  T                Q LR  G    + L  
Sbjct: 337 MEEPPVEIRYT-----KAEQEAAIKRAQALRAEGKAVVLKLEE 374


>gi|225175561|ref|ZP_03729555.1| histidyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168890|gb|EEG77690.1| histidyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 411

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 81/374 (21%), Positives = 150/374 (40%), Gaps = 36/374 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K K R   P G  D      R +  +   I+ I+  +G+  + TP  EYS +    +
Sbjct: 1   MNDKMK-RLLTPEGVRDLLPGLARQKRELEGKIQEIFGRWGYREVATPAFEYSANFVAEM 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             +      V+   D+ G+ + LR D T PLAR  A +      P R    G ++R    
Sbjct: 60  KAD--LEDKVYRFPDERGRTLVLRPDFTLPLARVAATHLAGGPKPLRLCYGGSIYRYASS 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G+ R+  Q  V+ +G +   ADAE+  + AD L+ +G++  ++ + + +   L+ +L 
Sbjct: 118 QQGKQREQTQAGVELIGIAGAGADAEVMALAADVLQELGLQ--EFTLCLGHAGFLETLLN 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  +D+                   + + +   +    +  +     +++ E  D +
Sbjct: 176 AHGVEAEDR-------------------ENIIVYFNKKDFVSLKEMVGSLDISQEAKDAI 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +    +   K + E    +            L    +++   G     I +   +VR ++
Sbjct: 217 LRVPHLRGGKEVLEAAAALVPAGEAAGPLAVLEEAWDVLEDYGVTR-FITLDLGLVRMMD 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E   G               + GGGRYD L+  F    +PA GF++ I  L+ 
Sbjct: 276 YYTGIVFEGYTGGLGY----------PICGGGRYDQLLENFG-PELPAVGFALNIDHLLT 324

Query: 361 ALKSLESSTNNIKE 374
            L+ L+      + 
Sbjct: 325 KLQRLKKLAPQNRP 338


>gi|330838967|ref|YP_004413547.1| ATP phosphoribosyltransferase regulatory subunit [Selenomonas
           sputigena ATCC 35185]
 gi|329746731|gb|AEC00088.1| ATP phosphoribosyltransferase regulatory subunit [Selenomonas
           sputigena ATCC 35185]
          Length = 394

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 85/411 (20%), Positives = 159/411 (38%), Gaps = 41/411 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  + +    +P G  D   +E + +  +  ++  ++  +G+D I TP +EY D+L    
Sbjct: 1   MS-ENEWIFGIPYGTRDLMPQEAQEKRHVEAALMGLFRLWGYDEIATPAIEYLDTLTMGN 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                P   +F L   D + ++LR+++T P+AR VA        P +   I  VFR+E+ 
Sbjct: 60  GRCLEP--QMFKLFAQDNRTLALRHEMTTPIARLVASRMREESLPLKLAYISNVFRSEQA 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G+SA  ADAE+  +  + + A G++  D+ + +     + G++ 
Sbjct: 118 QAGRQCEFNQGGVELIGTSAVAADAEVIALAIEGIRAAGLQ--DFQVCLGQVDFIGGMMR 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++      +                   + V   L            +  +L +   + M
Sbjct: 176 QMHFTETQQ-------------------ERVTFALERHDLVELAAIVEETDLPAAAKEGM 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
               ++  +K +      +     G +  + L  I  L+++ G     +     ++R L 
Sbjct: 217 KRIPTLHGKKDVLHEAYSIVLNEQGRRALDNLSEIYRLLQEYGVAE-YVSFDLGVIRDLN 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA            P +   + GGGRYD L++ F          +     +  
Sbjct: 276 YYTGMVFEAYA----------PGMGYPICGGGRYDQLLAGFGN----PCPATGFALGIER 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            L + E  +               HD   L +     + LR  G   E   
Sbjct: 322 LLLAKERQSQKRILPSKDCYIAYAHDK--LPEALQEARKLREQGKTCETAF 370


>gi|317500370|ref|ZP_07958594.1| ATP phosphoribosyltransferase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316898125|gb|EFV20172.1| ATP phosphoribosyltransferase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 421

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 97/458 (21%), Positives = 179/458 (39%), Gaps = 50/458 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +   P G  D  ++E  I+  +   +  +   YG+  I+TP  EY D   + +       
Sbjct: 11  KLHTPEGVRDIYSRECEIKLTLQKKLNQVLHLYGYRDIQTPTFEYYDVFREEIGST--ST 68

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++   D +G  ++LR D+T  +AR  A  FDT  FP R   +G  F N     G+ ++
Sbjct: 69  QELYKFFDREGNILALRPDITPSVARAAATLFDTEDFPLRFCYVGNTFINHTSYRGKLKE 128

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q   + +G  +  ADAEM  M+AD L+  G+   ++ I I +   L  IL    L  +
Sbjct: 129 NTQFGAELIGLDSVEADAEMIAMVADALKKTGL--EEFQISIGHVDFLQSILSAAELDEE 186

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                               ++ ++ L+G      + +  +  ++  E  +       + 
Sbjct: 187 -------------------TVERIRELIGNRNFFGAEELLEEKDVKKEIKEAFAILPELM 227

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + +  +    +   +     L  I   +      S+ +    ++  G  YYTG V+
Sbjct: 228 GTEDVLDKAQQFAISDKAKAAIERLRQI-NHLLCLYNASDHVTFDLSMSGGYGYYTGIVF 286

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 +V  GGRYD L+ +F  +  P+ GF+I +  L+ AL   + 
Sbjct: 287 RAYT----------YGTGDAVVRGGRYDHLLEKFG-KETPSIGFAIIVDELMNALSRQKI 335

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF---LGSSKNFGNQLKYA 424
           S + I+    V       + ++ S   +     R  G   E+     G  K+      YA
Sbjct: 336 SVDTIRRNIIVY------NEETESNAIILAGNFREKGRCIELIRQKEGQDKSLYE--SYA 387

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            R+N   A+I          L++ +L  G++ +  I  
Sbjct: 388 KRKNAA-ALIYLCD---DKKLEMTNLITGEKKTANIAE 421


>gi|289809790|ref|ZP_06540419.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 326

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 134/374 (35%), Gaps = 67/374 (17%)

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
            D   K +++ +D +G  ++LR + TA   R   E+        R + IGP+FR+E+   
Sbjct: 9   TDVVEKKMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQK 68

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG---------IKRNDYHIGINNRK 173
           GR+RQF Q   +  G      DAE+ M+ A    A+G                   N R 
Sbjct: 69  GRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARANYRD 128

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L   LE+     D+            D   +     +++L  +                
Sbjct: 129 ALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN---------PDVQAL 167

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                ++  +L  D  +    L +L+            L                     
Sbjct: 168 LNDAPVLGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL--------------------- 206

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
             VRGL+YY   V+E +               G+V  GGRYDGLV +  G+  PA GF++
Sbjct: 207 --VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVEQLGGRATPAVGFAM 256

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFL 411
           G+ RL++ ++++            V I  +   + + S      + LR    G++     
Sbjct: 257 GLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTNH 313

Query: 412 GSSKNFGNQLKYAD 425
           G   NF  Q   AD
Sbjct: 314 GGG-NFKKQFARAD 326


>gi|153814856|ref|ZP_01967524.1| hypothetical protein RUMTOR_01071 [Ruminococcus torques ATCC 27756]
 gi|331089622|ref|ZP_08338521.1| hypothetical protein HMPREF1025_02104 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847887|gb|EDK24805.1| hypothetical protein RUMTOR_01071 [Ruminococcus torques ATCC 27756]
 gi|330404990|gb|EGG84528.1| hypothetical protein HMPREF1025_02104 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 414

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 97/458 (21%), Positives = 179/458 (39%), Gaps = 50/458 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +   P G  D  ++E  I+  +   +  +   YG+  I+TP  EY D   + +       
Sbjct: 4   KLHTPEGVRDIYSRECEIKLTLQKKLNQVLHLYGYRDIQTPTFEYYDVFREEIGST--ST 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++   D +G  ++LR D+T  +AR  A  FDT  FP R   +G  F N     G+ ++
Sbjct: 62  QELYKFFDREGNILALRPDITPSVARAAATLFDTEDFPLRFCYVGNTFINHTSYRGKLKE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q   + +G  +  ADAEM  M+AD L+  G+   ++ I I +   L  IL    L  +
Sbjct: 122 NTQFGAELIGLDSVEADAEMIAMVADALKKTGL--EEFQISIGHVDFLQSILSAAELDEE 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                               ++ ++ L+G      + +  +  ++  E  +       + 
Sbjct: 180 -------------------TVERIRELIGNRNFFGAEELLEEKDVKKEIKEAFAILPELM 220

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + +  +    +   +     L  I   +      S+ +    ++  G  YYTG V+
Sbjct: 221 GTEDVLDKAQQFAISDKAKAAIERLRQI-NHLLCLYNASDHVTFDLSMSGGYGYYTGIVF 279

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 +V  GGRYD L+ +F  +  P+ GF+I +  L+ AL   + 
Sbjct: 280 RAYT----------YGTGDAVVRGGRYDHLLEKFG-KETPSIGFAIIVDELMNALSRQKI 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF---LGSSKNFGNQLKYA 424
           S + I+    V       + ++ S   +     R  G   E+     G  K+      YA
Sbjct: 329 SVDTIRRNIIVY------NEETESNAIILAGNFREKGRCIELIRQKEGQDKSLYE--SYA 380

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            R+N   A+I          L++ +L  G++ +  I  
Sbjct: 381 KRKNAA-ALIYLCD---DKKLEMTNLITGEKKTANIAE 414


>gi|260887276|ref|ZP_05898539.1| ATP phosphoribosyltransferase, regulatory subunit [Selenomonas
           sputigena ATCC 35185]
 gi|260863338|gb|EEX77838.1| ATP phosphoribosyltransferase, regulatory subunit [Selenomonas
           sputigena ATCC 35185]
          Length = 396

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 85/411 (20%), Positives = 159/411 (38%), Gaps = 41/411 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  + +    +P G  D   +E + +  +  ++  ++  +G+D I TP +EY D+L    
Sbjct: 3   MS-ENEWIFGIPYGTRDLMPQEAQEKRHVEAALMGLFRLWGYDEIATPAIEYLDTLTMGN 61

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                P   +F L   D + ++LR+++T P+AR VA        P +   I  VFR+E+ 
Sbjct: 62  GRCLEP--QMFKLFAQDNRTLALRHEMTTPIARLVASRMREESLPLKLAYISNVFRSEQA 119

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G+SA  ADAE+  +  + + A G++  D+ + +     + G++ 
Sbjct: 120 QAGRQCEFNQGGVELIGTSAVAADAEVIALAIEGIRAAGLQ--DFQVCLGQVDFIGGMMR 177

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++      +                   + V   L            +  +L +   + M
Sbjct: 178 QMHFTETQQ-------------------ERVTFALERHDLVELAAIVEETDLPAAAKEGM 218

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
               ++  +K +      +     G +  + L  I  L+++ G     +     ++R L 
Sbjct: 219 KRIPTLHGKKDVLHEAYSIVLNEQGRRALDNLSEIYRLLQEYGVAE-YVSFDLGVIRDLN 277

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA            P +   + GGGRYD L++ F          +     +  
Sbjct: 278 YYTGMVFEAYA----------PGMGYPICGGGRYDQLLAGFGN----PCPATGFALGIER 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            L + E  +               HD   L +     + LR  G   E   
Sbjct: 324 LLLAKERQSQKRILPSKDCYIAYAHDK--LPEALQEARKLREQGKTCETAF 372


>gi|254391326|ref|ZP_05006530.1| histidyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197705017|gb|EDY50829.1| histidyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 331

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 76/373 (20%), Positives = 137/373 (36%), Gaps = 66/373 (17%)

Query: 1   MGKKTKLR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M ++T +   + PRG  D    +      + ++I    +N G+  +ETP  E  +   + 
Sbjct: 1   MTRETPVTTFQAPRGTYDLLPPDSATFLAVREAIAAPLKNSGYGYVETPGFEAVELFARG 60

Query: 60  LPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF--PCRTYRIGPVFR 116
           + +  D   K +++ +   G  ++LR + TA + R   E         P + +  G  +R
Sbjct: 61  VGESTDIVTKEMYAFETKGGTKLALRPEGTASVLRAALEANLHKQGVLPVKLWYSGSYYR 120

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR--------NDYHIG 168
            EK   GR+R F Q   + +G+     DAE+ ++      ++G++          D    
Sbjct: 121 YEKPQKGRYRHFSQVGAEAIGAEDPALDAELIILADQAYRSLGLRHFRILLNSLGDQECR 180

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
              R+ L   L  + L  + +    +  LR +D         V+  L             
Sbjct: 181 PVYREALQEFLRGLDLDEETRRRVEINPLRVLDDKRP----EVRRQLT------------ 224

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
                      +   L         E+ EL+       +   +L                
Sbjct: 225 -------GAPSLRDSLCDGCRAYHQEVRELLTEAGVSFEDDEKL---------------- 261

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
                  VRGL+YYT   +E +                +VGGGGRYDGL     G  +P+
Sbjct: 262 -------VRGLDYYTRTTFEFV--------HDGLGSQSAVGGGGRYDGLSEMLGGPALPS 306

Query: 349 TGFSIGISRLIVA 361
            G+++G+ R ++A
Sbjct: 307 VGWALGVDRTVLA 319


>gi|237756873|ref|ZP_04585351.1| histidyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237690968|gb|EEP60098.1| histidyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 306

 Score =  148 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 68/341 (19%), Positives = 124/341 (36%), Gaps = 47/341 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRP 66
           + +  RGF D   +  +    I+D+ R  + +Y F  I  P +E      + + +  D  
Sbjct: 3   KIQKIRGFQDIYGENAKKYRYIVDTFRKTFLDYNFQEIILPYVEDVSLFKRSVGEATDIV 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-TYRIGPVFRNEKHGPGRF 125
            K ++   D  G+ ++LR + TA   R   E            +  G +FR E+   GR+
Sbjct: 63  QKEMYVFTDKGGRDVALRPEGTAGCVRAYIEEKMYAEGGYHKLFYEGAMFRYERPQAGRY 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q   +  G S+  AD E+  M+   L+ + I        + + +     + K+  +
Sbjct: 123 RQFHQIGAEIFGVSSYLADVELISMVYKILKNLKIDFRLEINTLGDFQSRKEYISKLIEY 182

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                          D   +     +++L  + + ++  + TK A   +E +        
Sbjct: 183 LK-----NYENSLCQDCRRRIHENPLRVL--DCKVESCKEITKDAPKITESLPK------ 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                                +       I E ++     S     +  +VRGL+YYT  
Sbjct: 230 ---------------------EAIERFEKIKESLKAI---SVDFIENPRLVRGLDYYTHT 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
           V+E I               G++  GGRYD LV + +    
Sbjct: 266 VFEFISQE--------IGSQGTIAAGGRYDNLVEQLEDHQR 298


>gi|268610446|ref|ZP_06144173.1| HisZ [Ruminococcus flavefaciens FD-1]
          Length = 397

 Score =  148 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 88/432 (20%), Positives = 155/432 (35%), Gaps = 43/432 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E  IR  I +S+  ++++ G+  I TP LE+ D     L     P   +
Sbjct: 8   TPEGTKDLLFGECIIRRNIENSLMELFKSRGYSEIITPGLEFFDVFN--LNSRYFPQVNL 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D  G+ + +R D T P+AR VA        P +     PV+  E    GR  + +Q
Sbjct: 66  YKLTDSKGRLLVMRPDSTMPIARVVATRLREAELPLKFCYDQPVYLTEPALKGRSDEIVQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +GS  + AD E+     D+L + G++ +     I   K L G LE          
Sbjct: 126 TGIELIGSQQKMADLEVISTAVDSLRSFGMEFSLEIGHIGIFKELVGRLEA--------- 176

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                             + ++ L+         DF      +S   + +    ++    
Sbjct: 177 -------------TPKEKENIRKLIENKNFPALNDFLDTFGTSS-VTNALKKLPALFGGI 222

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + +  E +      ++   EL  I   + +       I +   +V   +YYTG + +  
Sbjct: 223 EVFDKAEELMPDDNIKRLLEELKDIYNDISEICGGEASITVDLGLVNKTDYYTGLIIKGY 282

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           L                V  GGRYD L+S F   +VPA GF++ ++ +  A+        
Sbjct: 283 LQ----------GHGEEVLSGGRYDKLISEFGY-DVPAIGFAVNVNGIEKAIMKNGVFPA 331

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
             +    V       +           Q LR  G+  E  L       +  +YA  +   
Sbjct: 332 EKQIDAIVY-----AEEGCEVAALKAAQELREQGLVVENALFDD--LDSVREYAREKKIA 384

Query: 431 LAIIQGTGERSR 442
             ++  +  +  
Sbjct: 385 RVVVIDSESKEE 396


>gi|160892613|ref|ZP_02073403.1| hypothetical protein CLOL250_00143 [Clostridium sp. L2-50]
 gi|156865654|gb|EDO59085.1| hypothetical protein CLOL250_00143 [Clostridium sp. L2-50]
          Length = 426

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 91/464 (19%), Positives = 182/464 (39%), Gaps = 48/464 (10%)

Query: 5   TKLR---AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K++    + P G  D    E + + +I++ + +  E Y +  IETP  EY D   +   
Sbjct: 7   KKMQDKLLQTPDGVRDTYDVECKKKRKIIEKLHHTLELYSYHDIETPTFEYFDIFNRDKG 66

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
               P+  ++   D D   + LR D+T  +AR VA+ +     P R    G  + N +  
Sbjct: 67  SA--PSNEMYKFFDRDNNTLVLRPDITPSIARCVAKYYKDEQLPIRLCYTGNTYSNPRKL 124

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            G+ ++  Q   + +   +  ADAE+   + D+ +A+G   +++ I I       GI+ +
Sbjct: 125 QGKLKEVTQIGAELINDDSSAADAEIIATVVDSFKALG--IDEFQIEIGQIDYFKGIVAE 182

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+   ++L                    +K  +         ++ K  +++       +
Sbjct: 183 AGITEAEELQ-------------------IKEYINIKNFFGLEEYLKKLDMSPVLKKAFL 223

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           +F S+   +SM E  E +          + L  I + +   GY+   I    +++ G  Y
Sbjct: 224 AFDSLFGGESMLEEAEKLVTNPVSLAAVHRLQRIHKALCCYGYDK-YIGFDLSMLNGYNY 282

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG ++                   +V  GGRY+ L+ +F  ++ P+ GF+  +  LI+A
Sbjct: 283 YTGVIFRGYT----------YGTGDAVVKGGRYNNLLKQFG-KDAPSIGFAFTVEELIMA 331

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS-SKNFGNQ 420
           L       +            + +D ++        + +R    + E+   S  K+  + 
Sbjct: 332 LSRQNIEVSVEYSNT-----IILYDIENQEPAISLGKSMRQNDKKIELIRKSVRKSVDDY 386

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           L+YA R +    +           +++ DL  G E    I + +
Sbjct: 387 LEYAKREHFS-GLFYFEN---SDTVKVFDLVSGDENEVAIASLK 426


>gi|302386357|ref|YP_003822179.1| histidyl-tRNA synthetase 2 [Clostridium saccharolyticum WM1]
 gi|302196985|gb|ADL04556.1| histidyl-tRNA synthetase 2 [Clostridium saccharolyticum WM1]
          Length = 420

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 80/426 (18%), Positives = 153/426 (35%), Gaps = 41/426 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E   +  + + +  ++   G+  IETP  E+ D   +         K +
Sbjct: 8   TPDGVRDIYGVECTKKAALQEKMLKVFHLCGYQDIETPTFEFFDIFNESRGS--VKAKEM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           F   D D   + LR D T  +AR  A+ F     P R   I   F N     GR ++  Q
Sbjct: 66  FKFFDRDNHTLVLRPDETPAIARCAAKYFLDEDMPIRLCYIERTFINNSSYQGRLKESSQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+ +G  +  ADAE+  M+   L+A G+      +         G++E+ G+  + + 
Sbjct: 126 TGVEFIGDDSADADAEILAMVIKALKAAGLTEFQVEL--GEVDFFKGLMEEAGMDEETE- 182

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                             + ++ L+         +      ++ E   + +    +    
Sbjct: 183 ------------------EALRALIENKNYFGVEELVMAQPISKELKQVFLKLPELFGSL 224

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              +  + +       +    L  ++ ++   G  S+ +     ++    YYTG +++A 
Sbjct: 225 EQIQAAKELTSNPRALRAIERLEEVNRILEHYG-LSDYVSYDLGMLSQYLYYTGIIFKAY 283

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                            V  GGRYD L+ +F  ++ PA GF I +  L++AL   +    
Sbjct: 284 T----------YGTGDYVVNGGRYDKLLEQFG-KDSPAVGFGISVDELLLALSRQKIEIE 332

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS-SKNFGNQLKYADRRNC 429
                  +L      + ++       +   R AG+  ++ L   ++       YA RRN 
Sbjct: 333 VSVVNTMILY-----EKEARENAIRLSGHFRGAGMAVQLQLKDPARTLEEYQAYARRRNF 387

Query: 430 PLAIIQ 435
              +  
Sbjct: 388 NNLLFL 393


>gi|227872751|ref|ZP_03991074.1| histidine--tRNA ligase [Oribacterium sinus F0268]
 gi|227841412|gb|EEJ51719.1| histidine--tRNA ligase [Oribacterium sinus F0268]
          Length = 420

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 123/434 (28%), Positives = 189/434 (43%), Gaps = 46/434 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   +E+ IR RIL +IR +Y  +GF  IETP++E+ ++L      ++  
Sbjct: 3   LKKKAVTGMKDILPEEMAIRQRILSAIRRVYGRFGFTEIETPIVEHLENLLSKQGGDN-- 60

Query: 67  NKGVFSLQDDDGQ--------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
            K +F ++    +                 LRYDLT PL+R+ AEN   +  P +  +IG
Sbjct: 61  EKLIFKVEKRGEKLKEAIEKGDFEALSDAGLRYDLTLPLSRFYAENQAKLPSPFKALQIG 120

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           PVFR ++   GRFR+F QCD+D  G S+  ++ ++ + M   L+ +G             
Sbjct: 121 PVFRADRPQKGRFREFWQCDIDIFGDSSFLSEIDLLLAMGTLLQEIGFGE---QYPFYIV 177

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
                IL+ +  +      +   +   +DK DK G  GVK  L             G   
Sbjct: 178 VNDREILKAMQRYAGFPEGDFEQISIILDKEDKIGRDGVKGELA------------GLGY 225

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG-FNELVVISELVRKSGYNSNRIKI 291
           + EQI      L     K    L    K     E+G    L  I +LV  SG     ++ 
Sbjct: 226 SEEQISRYTELLDQVSGKKEDLLSLGEKLKDVLEEGVCQNLYKIMDLVEISGKGKIPLRF 285

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             ++VRG+ YYTG ++E                 GS+GGGGRYD +V +F G + PA GF
Sbjct: 286 DPSLVRGMGYYTGPIFEVRSTLFS----------GSIGGGGRYDKMVGKFTGIDTPAVGF 335

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF- 410
           SIG  R+I  L   E+S    ++    ++   D   + L K  +     R  G    +  
Sbjct: 336 SIGFERIITILMEGEASGVRAEKKA--ILLEKDLQEEELKKALLDAMDRRAKGELVLLSQ 393

Query: 411 LGSSKNFGN-QLKY 423
           +  +K F   QL  
Sbjct: 394 MNKNKKFQKEQLSK 407


>gi|71030718|ref|XP_765001.1| histidyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68351957|gb|EAN32718.1| histidyl-tRNA synthetase, putative [Theileria parva]
          Length = 508

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 103/487 (21%), Positives = 183/487 (37%), Gaps = 62/487 (12%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           ++ +      RG       E RI+  + +      +N+GF     P+L ++         
Sbjct: 41  RQNQRNLHSIRGTQSYLPPEQRIQKWLQNKWELTSKNFGFQEYSMPVLTHTSLFLDINTP 100

Query: 63  EDRPN-KGVFSLQDDDGQWISLRYDLTAPLAR----YVAENFDTIVFPCRTYRIGPVFRN 117
           +D  + K ++S +D  G+ +SLR D+T         Y +          + Y I   +R 
Sbjct: 101 KDNEHYKELYSFKDRKGRNLSLRGDITPQFMNMLTSYYSNKRVPSHNILKWYTIADCWRY 160

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+ G GR R  +Q + D VG S    + E+  M+   L++VG+   D  I +N+R ++ G
Sbjct: 161 ERPGLGRRRNHLQWNADIVGISDIQVEVELISMLIHFLKSVGLSHEDVVISLNHRNVIPG 220

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           IL  +G              + +DK  K   +    LL E +   + +   G     E  
Sbjct: 221 ILTLLGFSNYSSDW-FYQFSKTLDKYKKIPKEEFNKLLIELKF--TPEQCSGLEEILETS 277

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +     I   + + EL +LV                   +      SN I I  TIVR
Sbjct: 278 RTLEEIQRIFNPEDIQELKQLV------------------HLLTEKGYSNWINIDLTIVR 319

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           G +YYTG V+E       ++         S+ GGGRYD   +    +   + GF++G   
Sbjct: 320 GNDYYTGLVFECFDRNRKLS--------RSIAGGGRYDNYFNHCDPRLKYSAGFAMGNIA 371

Query: 358 LIVALKSLESSTNNIKEMGPVLIT------------------TMDHDSDSLSKYQMYTQM 399
           ++  LK    + N+ + +  V+ T                  T+               +
Sbjct: 372 ILDLLKHKGVNINSEEPVDVVVFTPNYTRNNCEQKVETDTDQTLPCSKSQRMCLYNLMDL 431

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ----GTGERSRGMLQIKDLAKGKE 455
           LRT  I    +  +S+     LK+AD       ++     G       ++ ++D+  G++
Sbjct: 432 LRTNDISVYQYYKTSRLMKA-LKFADNSMAKFVVMPLLHNG-----NEVIVLRDMNTGEQ 485

Query: 456 LSREIKN 462
                 +
Sbjct: 486 DFFNPSD 492


>gi|297531330|ref|YP_003672605.1| histidyl-tRNA synthetase 2 [Geobacillus sp. C56-T3]
 gi|297254582|gb|ADI28028.1| histidyl-tRNA synthetase 2 [Geobacillus sp. C56-T3]
          Length = 394

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 94/414 (22%), Positives = 166/414 (40%), Gaps = 46/414 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK  +  E P G  D       ++ ++   +    E +G++ IETP LEY +++G   
Sbjct: 1   MAKKLFM-FEKPLGMRDTLPFLYELKKQVRSVMAEEIERWGYEFIETPTLEYYETVGAAS 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D     +F L D  G  + LR D+TAP+AR  A        P R      VFR ++ 
Sbjct: 60  AIADH---RLFKLLDQQGHTLVLRPDMTAPIARVAASRLYEDGNPLRLAYNANVFRAQQR 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G    TADAE+  +M   L+ VG+    + + + +   ++ +  
Sbjct: 117 EGGRPAEFEQIGVELIGDGTVTADAEVISLMVALLKRVGL--GRFSVAVGHIGYVNALFL 174

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I  + +                       ++  L E       +  K   L+S     +
Sbjct: 175 EILGNEERASV-------------------LRRFLYEKNYVGYREHVKSWPLSSIDQKRL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  LS+     + E  + +  +  G +  +EL  +   +R  G     +K+   +V  + 
Sbjct: 216 LDLLSLRGGTDVIEQAKTLVTSEEGRRSADELAALMAALRTYGVAE-AVKLDMALVSHMS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++E                   +G GGRYD L+++F  +  PATGF + + RLI 
Sbjct: 275 YYTGILFEVYAEQVGF----------PIGNGGRYDDLLAKFS-RPAPATGFGLRVDRLIE 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           A+   +             I  +    + L++     +  R  G R  +   + 
Sbjct: 324 AIGETDVRD---------DIECIVFSQERLAEAVELAEAKRAEGKRVVLQHIAG 368


>gi|256370902|ref|YP_003108726.1| Histidine--tRNA ligase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007486|gb|ACU53053.1| Histidine--tRNA ligase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 425

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 110/436 (25%), Positives = 188/436 (43%), Gaps = 60/436 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG  D    E  +R+     IR+ Y ++GF  IETP++E  ++L      E+   K +F 
Sbjct: 8   RGMRDILPGEHEVRSAAASVIRSTYRSHGFLEIETPIVETLEALAASGAGENA--KLMFK 65

Query: 73  LQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +     +                LR+DLT PLAR+ A N   +  P    +IGP FR E+
Sbjct: 66  VLKRGERLDLGSASSPDDLVDAGLRFDLTVPLARFYAVNQSKLPKPFLAMQIGPAFRAER 125

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              GR RQF+Q D D +G ++  A+ E+ +     L  +G++   + + +N+R+ ++ +L
Sbjct: 126 PQRGRLRQFVQADADILGEASWLAEVELLIAATAALHQLGLEG--FELHVNDRRAVEHVL 183

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E++ +  D        VL A+DKLDK     V+  +             GA L  E  D 
Sbjct: 184 ERLEVPAD----HWRSVLVALDKLDKEPPIAVRNEM------------VGAGLGEELADH 227

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +++ L   +E       ++++           L  I+  VR +      + I   IVRGL
Sbjct: 228 VLATLGDIVEN--EHPLDVLETLDVDASVLESLHAIATHVR-TSVRDTEVVIDPLIVRGL 284

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YY+  V+E +           P    S+GGGGRYDGL++RF   + PA G S+G  R++
Sbjct: 285 DYYSSSVFEIV----------HPHWSSSIGGGGRYDGLLARFG-VDEPACGISLGFERIL 333

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS--SKNF 417
             L+ L       +    ++          +++     +  R  G    +      +++ 
Sbjct: 334 SLLEELGIHLATPRRRLTLIFDPTTQ----IAEALRMARHFRRDGYLVTLLPHDHTARSP 389

Query: 418 GNQLKY----ADRRNC 429
              +K     A+    
Sbjct: 390 ---MKRLALAAEELKA 402


>gi|56421612|ref|YP_148930.1| ATP phosphoribosyltransferase regulatory subunit [Geobacillus
           kaustophilus HTA426]
 gi|81346471|sp|Q5KVC4|HISZ_GEOKA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|56381454|dbj|BAD77362.1| histidyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 394

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 94/414 (22%), Positives = 167/414 (40%), Gaps = 46/414 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK  +  E P G  D       ++ ++   +    E +G++ IETP LEY +++G   
Sbjct: 1   MAKKLFM-FEKPLGMRDTLPFLYELKKQVRSVMAEEIERWGYEFIETPTLEYYETVGAAS 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D     +F L D  G  + LR D+TAP+AR  A        P R      VFR ++ 
Sbjct: 60  AIADH---RLFKLLDQQGHTLVLRPDMTAPIARVAASRLYDDGNPLRLAYNANVFRAQQR 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G    TADAE+  +M   L+  G+    + + + +   ++ +  
Sbjct: 117 EGGRPAEFEQIGVELIGDGTVTADAEVISLMVALLKRTGL--GRFSVAVGHIGYVNALFL 174

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I  + +                       ++  L E       +  K   L+S     +
Sbjct: 175 EILGNEERASV-------------------LRRFLYEKNYVGYREHVKSWPLSSIDQKRL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  LS+     + E  + +  +  G +  +EL V+  ++R  G     +K+   +V  + 
Sbjct: 216 LDLLSLRGGTDVIEQAKTLVTSEKGRRAADELAVLMAVLRTYGVAE-AVKLDMALVSHMS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++E                   +G GGRYD L+++F  +  PATGF + + RLI 
Sbjct: 275 YYTGILFEVYAEQVGF----------PIGNGGRYDDLLAKFS-RPAPATGFGLRVDRLIE 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           A+   +             I  +    + L++     +  R  G R  +   + 
Sbjct: 324 AIGETDVRD---------DIECIVFSQERLAEAVELAEAKRAEGKRVVLQHIAG 368


>gi|194373407|dbj|BAG56799.1| unnamed protein product [Homo sapiens]
          Length = 362

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 81/359 (22%), Positives = 146/359 (40%), Gaps = 39/359 (10%)

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
             +    +   +        G++  D+ I +N+R+I+DG+    G+       +   +  
Sbjct: 38  QFDPMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAVCGVPES----KFRAIGS 93

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL--- 255
           +IDKLDK   + V+            +      L  E  D +  ++      S+ E    
Sbjct: 94  SIDKLDKMAWKDVR-----------HEMVVKKGLAPEVADRIGDYVQCHGGVSLVEQMFQ 142

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +       +G  +L ++ E +   G  +++I    ++ RGL+YYTG +YEA+L    
Sbjct: 143 DPRLSQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARGLDYYTGVIYEAVLLQTP 201

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVALKSLESSTNNIK 373
               ++P+  GSV  GGRYDGLV  F      VP  G SIG+ R+   ++    +     
Sbjct: 202 TQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERIFYIVEQRMKTKGEKV 261

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +       + L +       L  +GI+AEM   ++     QL Y +    PL +
Sbjct: 262 RTTETQVFVATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKLLTQLHYCESTGIPLVV 321

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           I G  E   G+++I+ +A  +E++                  I     V+ ++K L E+
Sbjct: 322 IIGEQELKEGVIKIRSVASREEVA------------------IKRENFVAEIQKRLSES 362



 Score = 41.4 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 19/32 (59%)

Query: 23 IRIRNRILDSIRNIYENYGFDPIETPLLEYSD 54
          + +R +ILD + + ++ +G   ++TP  E  D
Sbjct: 1  MVVREKILDLVISCFKRHGARGMDTPAFELKD 32


>gi|295114804|emb|CBL35651.1| histidyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 420

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 118/433 (27%), Positives = 184/433 (42%), Gaps = 46/433 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ IR+ +L  I+  Y ++GF  IETP +E+ ++L      ++  
Sbjct: 3   LKKKPVTGMKDILPAEMEIRDYVLAKIKETYRSFGFSAIETPCVEHIENLTSKQGGDN-- 60

Query: 67  NKGVFSLQDDD-----------GQWI--SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +               G  +   LRYDLT PL+RY A N   +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLNLETAREEGDVVDGGLRYDLTLPLSRYYANNSANLPSPFKALQVGS 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+       L  +    N + + IN+R+
Sbjct: 121 VWRADRPQKGRFRQFVQCDIDILGDPTSLAEIELITATTTALSRI-CPDNSFTVRINDRE 179

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L  +    G   DD       V   +DK+DK GL GV   L E                
Sbjct: 180 LLKAMASYCGFPEDD----CDKVFITLDKMDKIGLDGVAAELMEM------------GYA 223

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE-LVVISELVRKSGYNSNRIKIS 292
            E +D     L+     +              ++G  E L  I E V  +      I+  
Sbjct: 224 KESVDRYRELLASVKNDAAGVRALGETLKGVLKEGTAEGLANIMETVSSTAEAEFGIEFD 283

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            T+VRG+ YYTG ++E                 GSV GGGRYD ++ +F G + PA GFS
Sbjct: 284 PTLVRGMGYYTGTIFEV----------SMEGFGGSVAGGGRYDKMIGKFTGMDTPACGFS 333

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-L 411
           IG  R++  L                 +   +  S+ LS+        R AG++  +  +
Sbjct: 334 IGFERIVTILLD-NGFKVPAASGKKAYLFEKNIGSEKLSQVLKEASEERKAGVQVLVAQM 392

Query: 412 GSSKNFGN-QLKY 423
             +K F   QL+ 
Sbjct: 393 NKNKKFQKEQLQK 405


>gi|283795477|ref|ZP_06344630.1| histidyl-tRNA synthetase [Clostridium sp. M62/1]
 gi|291077142|gb|EFE14506.1| histidyl-tRNA synthetase [Clostridium sp. M62/1]
 gi|295091161|emb|CBK77268.1| histidyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 420

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 117/433 (27%), Positives = 183/433 (42%), Gaps = 46/433 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ IR+ +L  I+  Y ++GF  IETP +E+ ++L      ++  
Sbjct: 3   LKKKPVTGMKDILPAEMEIRDYVLAKIKETYRSFGFSAIETPCVEHIENLTSKQGGDN-- 60

Query: 67  NKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY A N   +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLNLETAREESDVVDGGLRYDLTLPLSRYYANNSANLPSPFKALQVGS 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+       L  +    N + + IN+R+
Sbjct: 121 VWRADRPQKGRFRQFVQCDIDILGDPTSLAEIELITATTTALSRI-CPDNSFTVRINDRE 179

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L  +    G   DD       V   +DK+DK GL GV   L E                
Sbjct: 180 LLKAMASYCGFPEDD----CDKVFITLDKMDKIGLDGVAAELMEM------------GYA 223

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE-LVVISELVRKSGYNSNRIKIS 292
            E +D     L+     +              ++G  E L  I E V  +      I+  
Sbjct: 224 KESVDRYRELLASVKNDAAGVRALGETLKGVLKEGTAEGLANIMETVSSTAEAEFGIEFD 283

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            T+VRG+ YYTG ++E                 GSV GGGRYD ++ +F G + PA GFS
Sbjct: 284 PTLVRGMGYYTGTIFEV----------SMEGFGGSVAGGGRYDKMIGKFTGMDTPACGFS 333

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-L 411
           IG  R++  L                 +   +  S+ LS+        R AG++  +  +
Sbjct: 334 IGFERIVTILLD-NGFKVPAASGKKAYLFEKNIGSEKLSQVLKEASEERKAGVQVLVAQM 392

Query: 412 GSSKNFGN-QLKY 423
             +K F   QL+ 
Sbjct: 393 NKNKKFQKEQLQK 405


>gi|182417103|ref|ZP_02948480.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           butyricum 5521]
 gi|237668475|ref|ZP_04528459.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182379036|gb|EDT76541.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           butyricum 5521]
 gi|237656823|gb|EEP54379.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 377

 Score =  146 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 85/416 (20%), Positives = 163/416 (39%), Gaps = 45/416 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK      LP G  D    E  ++  I   I +I+  +G+  I TP +E+ ++     
Sbjct: 1   MKKKNI----LPEGTRDLILDECIVKRAIERDIDDIFYKWGYKEIITPTVEFYETFNH-- 54

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             +    + ++   D+ G+ + LR D+T P+AR V   F     P +      VFR    
Sbjct: 55  DSQTLKEEDMYKFFDNRGRILVLRPDMTIPIARVVETKFKDESLPIKLRYNSNVFRVHAS 114

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G+  ++  C V+ +G   + +D E+ ++  + LE +G+   D+ + I N    +G+ +
Sbjct: 115 LGGKRNEYTDCGVELIGLEDKKSDLEVLVLALEALEKLGLS--DFKLEIGNIGFFEGVFK 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + +  + K                   + +   + +    N  D+    ++  E  +  
Sbjct: 173 TLNISKESK-------------------EIIAQYIEDKNLKNLEDYLDEIDIKDEYKEFF 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +  ++S+ E  +++      +     L  +   +   GY  N++     +V  L 
Sbjct: 214 NKLPWLFGDRSILEEAKVLAFNEELKANLEYLENLYSELDILGYG-NKVTFDLGMVPRLN 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++                V  +V  GGRYD L++  +   +PA GFS+ I+ +I 
Sbjct: 273 YYTGIIFRGY----------GEGVGNTVLRGGRYDNLITIGEEY-IPAIGFSLDINSVIE 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
            +K+ E      K             S    +    ++ LR  G   E+    S N
Sbjct: 322 NVKTSEKINTIDKSCKIYY------SSKYRIEAIRKSEQLRQEGKIVELIPDDSVN 371


>gi|210615563|ref|ZP_03290661.1| hypothetical protein CLONEX_02879 [Clostridium nexile DSM 1787]
 gi|210150230|gb|EEA81239.1| hypothetical protein CLONEX_02879 [Clostridium nexile DSM 1787]
          Length = 418

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 84/399 (21%), Positives = 148/399 (37%), Gaps = 40/399 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E R +  + + ++ I   YG+  I+TP+ E+ D  GK +      +K +
Sbjct: 8   TPEGVRDIYGIECRRKLMLEEKLQEILHLYGYQDIQTPMFEFFDVFGKEIG--TISSKEL 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D DG  + LR D+T  +AR  A   D+   P R    G  F N     G+ ++  Q
Sbjct: 66  YKFFDRDGNTLVLRPDITPSIARVAATFLDSKGLPVRLCYNGNTFINHSSYRGKLKESTQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              + +G  +  ADAEM  + AD L+A G+  N++ I I N    + +LE  GL  + + 
Sbjct: 126 MGAELLGIDSLEADAEMIALAADCLKAAGL--NEFQIYIGNVDFFESLLEDAGLEEEKEA 183

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               ++ L+         +      +  E          +    
Sbjct: 184 R-------------------LRELIANRNYFGVEELLDNCGVKEETKAAFRVLEELTGGI 224

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E  + +       +    L    E++   G     I    ++     YYTG ++   
Sbjct: 225 EIMECAKKIVSCEKALRAVERLSETYEILVSYGV-EKYITFDLSMSGTYGYYTGIIFRGY 283

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                           ++  GGRYD LV +F  +  P+ GF+I I  L+ A+   +    
Sbjct: 284 T----------YGTGDAIVKGGRYDHLVEKFG-KEFPSIGFAIVIDELMGAISRQKLEIP 332

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
             ++   +L      +    S+     +  R A    E+
Sbjct: 333 YHQKNTLILY-----EESERSRAIALAKEFRLAEKPTEL 366


>gi|50955299|ref|YP_062587.1| histidyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81826617|sp|Q6ADR4|SYH_LEIXX RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|50951781|gb|AAT89482.1| histidyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 431

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 126/439 (28%), Positives = 188/439 (42%), Gaps = 51/439 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
              PRG  D    E   R   L  IR  +  +GFD IETP+ E    L   L  ++   K
Sbjct: 5   ITPPRGMRDFLPAEKARREHALGVIRRSFSAHGFDEIETPVAEDVARLHAGLGGDN--EK 62

Query: 69  GVFSLQDDD--GQ---------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRI 111
             FS+      G                 + LR+DLT PLAR+ A +   +    R+ +I
Sbjct: 63  LAFSVLKRGLSGDDLRAAIESGDTLSLCDLGLRFDLTVPLARFFASHRAELSPVFRSLQI 122

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
            PV+R E+   GR+RQF+QCD+D VG +++ A+AE+    A TL+A+G+K  D  I +N+
Sbjct: 123 APVWRAERPQKGRYRQFVQCDIDIVGEASQLAEAELITATAATLDALGLK--DCTIRVND 180

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
           R+IL+ +L+  G             L +IDKLDK G +GV   L EG  D +        
Sbjct: 181 RRILNALLQHCGFAEAR----WPRALISIDKLDKIGAEGVVAELSEGAADAAAALGGVLA 236

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
                       L+    +   +    +           EL  ++  +        R++ 
Sbjct: 237 -------GFEPHLADGGVELTAQAILRILPAGVDTAAIGELETLAHALGAL-PTGVRLRF 288

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
              +VRG+ YYTG ++E             P    SVGGGGRYDG++ RF G  VPA GF
Sbjct: 289 DPKLVRGMGYYTGVIFEI----------AHPGSGSSVGGGGRYDGMIGRFLGTEVPACGF 338

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG  R++  ++         +  GP  +  +   +  + +       L  AG R  +  
Sbjct: 339 SIGFERVVDLIE-------LPESAGPDSVVLVYDPAMPIGRLLAIKSDLAAAGRRVRLD- 390

Query: 412 GSSKNFGNQLKYADRRNCP 430
             +KN    L  A      
Sbjct: 391 RRAKNLKAVLDRAAAAGFR 409


>gi|266623560|ref|ZP_06116495.1| histidine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288864660|gb|EFC96958.1| histidine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 419

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 112/429 (26%), Positives = 182/429 (42%), Gaps = 48/429 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ +R+ +++ IR  Y  +GF  I+TP +E+ ++L      ++  
Sbjct: 3   LKKKPVTGMKDILPAEMAVRDYVMNQIRETYRGFGFTSIDTPCVEHIENLTSKQGGDN-- 60

Query: 67  NKGVFSLQDDD----------GQWIS---LRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +                 ++   LRYDLT PL RY A N  ++  P +  ++G 
Sbjct: 61  EKLIFKIMKRGEKLRLDTAETENDLTDSGLRYDLTVPLCRYYANNAASLPAPFKALQMGS 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R +K   GRFRQF+QCD+D +G  +  A+ E+ +     L  VG K   YH+ IN+R 
Sbjct: 121 VWRADKPQRGRFRQFVQCDIDILGDPSRLAEIELILATTTLLGKVGFKG--YHVRINDRN 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL G+    G   +        V   +DK+DK G++GV   L E            A   
Sbjct: 179 ILKGMAAYCGFPEES----FDQVFIILDKMDKIGMEGVASELSE------------AGYE 222

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
             +ID  ++        +  +  L E +K  +  EK    L  I + V     +   I  
Sbjct: 223 KNKIDQYLALFGSVTPDAAGVRSLGETLKDVMEPEKA-ENLAAIMDSVNSIATSQFDIIF 281

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG +YE  +     +               RYD ++ +F G   PA GF
Sbjct: 282 DPTLVRGMSYYTGTIYEIQVDGFPGSVGGGG----------RYDKMIGKFTGMETPACGF 331

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF- 410
           SIG  R+I  L   E  +          +      ++ ++         R  G+   +  
Sbjct: 332 SIGFERIITILME-EGFSVPGSTEKKAFLIEKGVSAEVMTAAIKEAMDERARGVSVLVSQ 390

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 391 MNKNKKFQK 399


>gi|225568046|ref|ZP_03777071.1| hypothetical protein CLOHYLEM_04119 [Clostridium hylemonae DSM
           15053]
 gi|225163142|gb|EEG75761.1| hypothetical protein CLOHYLEM_04119 [Clostridium hylemonae DSM
           15053]
          Length = 424

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/417 (18%), Positives = 142/417 (34%), Gaps = 44/417 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K        P G  D    E   +  +   +  ++  YG+  I+TP  EY D   K +
Sbjct: 8   MKK----LLHTPEGVRDIYNVECGKKLALESRLGKVFHLYGYHDIQTPTFEYFDVFRKEI 63

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                P+K ++   D DG  + LR D+T  +AR  A  F     P R    G  F N   
Sbjct: 64  G--TIPSKDLYKFFDKDGNTLVLRPDITPSVARAAATLFGEEQLPIRLCYTGNTFVNHSS 121

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+  Q   + +G  +  ADAEM  ++ + L ++G+K     + + N      ++E
Sbjct: 122 YQGRLRENTQMGAELMGDDSVEADAEMLALVIECLTSIGLKEFQ--LNVGNVDYFQSLIE 179

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              L  + +                     V+ L+          F    ++     +  
Sbjct: 180 DADLDEEAE-------------------DRVRELINNRNYFGVEQFLDSIHVKRSSKEAF 220

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +   +     +            G      L  I ++++  G     +    ++     
Sbjct: 221 SALDELVGGVEILAQARNTAPNSKGIMAVKRLERIYDVLKIYGV-EEYVTFDLSMSGTYG 279

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++                   +   GGRYD L+ +F  +   + GF I I  L+ 
Sbjct: 280 YYTGIIFRGYTF----------GTGDAFVKGGRYDRLLEKFG-KESASIGFVIVIDELMN 328

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           AL   +      ++        + +D + L +  +  +  R      E+   S    
Sbjct: 329 ALTRQKVRIVYTRKNT-----LIVYDEERLKEALILARDFRKKAKNTELVKKSKGKL 380


>gi|291522215|emb|CBK80508.1| ATP phosphoribosyltransferase regulatory subunit [Coprococcus catus
           GD/7]
          Length = 416

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 75/408 (18%), Positives = 151/408 (37%), Gaps = 41/408 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D   +E   +N +   +  I + YG+  I+TP  E+ D   +       P++ +
Sbjct: 7   TPEGVRDIYNEECSKKNALSAKLDRILKLYGYKDIQTPTFEFFDIFNR--ERGSVPSRNM 64

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D DG  + LR D+T  +AR VA+ F     P R    G  F N     G+ ++  Q
Sbjct: 65  YKFIDRDGSTLVLRPDITPSIARAVAKYFKEETIPLRFSYCGNTFINNSSLQGKMKETTQ 124

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              + +G      DAE+  +    L   G+   D+ + I +  +   ++ + G+  +   
Sbjct: 125 LGAELIGDRDIEGDAEVVALAIHLLLESGLT--DFQLDIGHVGLFKALVAEAGMDEE--- 179

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                            +  +++L+            +   L+ E   +++    +    
Sbjct: 180 ----------------TVSQLRVLIESKNYFGVEALVEKLTLSDETAKLLLKLPELFGSG 223

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +      +       K  +E+  + +L+ + G+    I I   ++   +YYTG ++   
Sbjct: 224 DIIAEARSMTCNAEALKALDEIEKLCQLIAEYGF-EKYITIDLGMLTEYDYYTGMIFRGY 282

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                           +V  GGRYD L+ +F  ++  + GF++ +  L++AL   +    
Sbjct: 283 T----------YGTGDAVVKGGRYDHLIGQFG-KDAASVGFAVVLDELMLALSRQKIDIP 331

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS-SKNF 417
             +E   VL      + +  S        LR       M      ++ 
Sbjct: 332 TNEEATMVLY-----EPEYRSTAIRTANALRNINQAVSMMKKETDRSL 374


>gi|225378044|ref|ZP_03755265.1| hypothetical protein ROSEINA2194_03704 [Roseburia inulinivorans DSM
           16841]
 gi|225210045|gb|EEG92399.1| hypothetical protein ROSEINA2194_03704 [Roseburia inulinivorans DSM
           16841]
          Length = 396

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 87/417 (20%), Positives = 161/417 (38%), Gaps = 44/417 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+       P G  D   +E   +  +   +  I + YG+ PI+TP  E+ D  GK +
Sbjct: 1   MKKQL---LHTPEGVRDIYNEECEKKLLLQSDLLGILKGYGYHPIQTPTFEFFDIFGKEI 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                P+K ++   D +G  + LR D+T  +AR  A+ F     P R   +G  F N   
Sbjct: 58  GTT--PSKELYKFFDREGNTLVLRPDMTPSIARAAAKYFMDEDMPIRLCYMGNTFINNSS 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR ++  Q   + +G S   ADAE+  M  + L+  G+K  D+ + + +     G++E
Sbjct: 116 YQGRLKESTQLGAELIGDSTVDADAEILSMTVECLQKAGLK--DFQLSVGHADFFQGLVE 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G+  +D+   R ++                            +F +  NL +E  ++ 
Sbjct: 174 AAGISEEDEEELRELL-------------------ANKNFFGVEEFAETLNLKAELNELF 214

Query: 241 VSFLSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
               S++++   +    E            + L  + +++   G     I     I+   
Sbjct: 215 HMLGSLNVDLNDLKRAKEAAASYPRILAAIHNLEELHKVLEVYGIQK-YISFELGIISSY 273

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG ++                    +  GGRYD L++ +   +  + GF+I I +L+
Sbjct: 274 QYYTGIIFSGYTF----------GSGEPIVKGGRYDKLLTYYGKTSA-SIGFAIVIDQLM 322

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
            AL   + +         ++ T       + +K  +  +  R AG   E  L     
Sbjct: 323 AALSRQKINITIETNGELIVYT-----KAAQAKAILSAKEKRAAGTPVETILKDDTK 374


>gi|153853080|ref|ZP_01994489.1| hypothetical protein DORLON_00474 [Dorea longicatena DSM 13814]
 gi|149753866|gb|EDM63797.1| hypothetical protein DORLON_00474 [Dorea longicatena DSM 13814]
          Length = 417

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 88/465 (18%), Positives = 162/465 (34%), Gaps = 51/465 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K    +   P G  D    E   +  +   ++ ++  YG+  I+TP +EY D   + +
Sbjct: 1   MKK----KLHTPEGVRDIYNVECGKKLALESRLKKVFHLYGYHDIQTPTIEYFDVFREEI 56

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                P   ++   D DG  + LR D+T  +AR  A  F     P R    G  F N   
Sbjct: 57  GTT--PANDLYKFFDKDGNTLVLRPDITPSIARASATLFKDENLPIRLCYTGNTFVNHSS 114

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+  Q   + VG  +  ADAEM  ++ +++  +G+K     + + N      ++E
Sbjct: 115 YQGRLRETTQMGAEFVGDDSVEADAEMLALVIESMLTIGLKEFQ--LCVGNVDFFQSLIE 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              L  + +                   + V+ L+G        +F           +  
Sbjct: 173 DASLDEEAE-------------------ERVRELIGNRNYFGVEEFLDSIQAKRSSKEAF 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +   +     + E  E +     G      L  I  ++R  G     +    ++     
Sbjct: 214 SALNELIGGIDILEKAENLAPNSKGVMAIRRLEKIYHILRYYGV-EKFVTFDLSMTGTYG 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+                   +V  GGRYD L+ +F  +  P+ GF+I I  L+ 
Sbjct: 273 YYTGIVFRGYT----------YGTGDAVVKGGRYDHLIEKFG-KKSPSIGFAIVIDELVS 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGSSKNFGN 419
           AL   +      ++        + +      +     +  R     AE+     +    +
Sbjct: 322 ALTRQKIRIVYPRKNT-----IIIYAEGRQLEAIRLAKDFRRKAKNAELLKKDENSGLED 376

Query: 420 QLKYADRRNC-PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            ++Y +      L  I        G + + +L  G++      + 
Sbjct: 377 YIRYGNDYYAGSLVYI-----EETGEVTMVNLVTGEQKIVNSTDR 416


>gi|229829103|ref|ZP_04455172.1| hypothetical protein GCWU000342_01188 [Shuttleworthia satelles DSM
           14600]
 gi|229792266|gb|EEP28380.1| hypothetical protein GCWU000342_01188 [Shuttleworthia satelles DSM
           14600]
          Length = 392

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 88/433 (20%), Positives = 160/433 (36%), Gaps = 56/433 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D   +E+  +  I  ++     ++G+ PI+TP  E+ D  G          K  
Sbjct: 8   TPEGVRDLYGEELARKKHIERALHKRLASFGYQPIQTPTFEFFDVFGSKRGTSHA--KSW 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D +G  + LR D+T  +AR  A+ F       R    G +F N     G  ++  Q
Sbjct: 66  YKFFDREGNTLVLRPDITPSIARAAAKYFTEEDRAIRLSYQGNIFDNNSSYQGHLKESTQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              + +G  +  ADAEM  ++   ++A+G    D+ I + +  +L G+++      D   
Sbjct: 126 LGAELIGDPSVDADAEMIALVVCGMQAIGFL--DFQISVTHADLLSGLMDACRFDDD--- 180

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLE 249
                             + ++ L+         ++ +  ++ ++   +  S   I +  
Sbjct: 181 ----------------NRERIQSLIENHNRFGLQEYLEEESVPADLAKLFDSMTRIYNSP 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
               +L           + F+ L  I E+++  G +S  +     ++   EYYTG ++  
Sbjct: 225 VDWADLTNRCAAYPKITEAFDRLEQIYEILKIYGVDS-YVSFEPGLLASSEYYTGLIFAG 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            +   GGRYD L+S F  +N  A GF+  + RL++A  S E   
Sbjct: 284 YTF----------GSGQAFVRGGRYDQLLSYFG-KNAAAIGFAFSVDRLMLAASSQELEI 332

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-------FLGSSKNFGNQLK 422
               +   VL            K       LR AG R  +        L + K+     +
Sbjct: 333 EEDGQDQLVLYH-----RSQRVKALHLAHDLRQAGQRVTLISCEDTRDLEAEKS-----R 382

Query: 423 YADRRNCPLAIIQ 435
           YA      L  + 
Sbjct: 383 YA---GARLTCLI 392


>gi|67970475|dbj|BAE01580.1| unnamed protein product [Macaca fascicularis]
          Length = 445

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 9/211 (4%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLR+DLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRHDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R+R+F QCD D  G+       +   +         ++  D+ + +N+R+ILDG+    G
Sbjct: 167 RYREFYQCDFDIAGNFD-PMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICG 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLL 214
           +       +   +  ++DKLDK   + VK  
Sbjct: 226 VSDS----KFRTICSSVDKLDKVSWEEVKNE 252



 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 2/171 (1%)

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVA 361
               EA+L        ++P+  GSV  GGRYDGL  +   KG+ VP  G SIG+ R+   
Sbjct: 248 EVKNEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSI 307

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++    +           +         L +       L  AGI+AE+    +    NQL
Sbjct: 308 VEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQL 367

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +Y +    PL  I G  E   G+++++ +   +E++   ++ ++ +     
Sbjct: 368 QYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVNVRREDLKTGQNGDFN 418


>gi|261420515|ref|YP_003254197.1| ATP phosphoribosyltransferase regulatory subunit [Geobacillus sp.
           Y412MC61]
 gi|319768184|ref|YP_004133685.1| histidyl-tRNA synthetase 2 [Geobacillus sp. Y412MC52]
 gi|261376972|gb|ACX79715.1| histidyl-tRNA synthetase 2 [Geobacillus sp. Y412MC61]
 gi|317113050|gb|ADU95542.1| histidyl-tRNA synthetase 2 [Geobacillus sp. Y412MC52]
          Length = 394

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 94/414 (22%), Positives = 167/414 (40%), Gaps = 46/414 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK  +  E P G  D       ++ ++   +    E +G++ IETP LEY +++G   
Sbjct: 1   MAKKLFM-FEKPLGMRDTLPFLYELKKQVRSVMAEEIERWGYEFIETPTLEYYETVGAAS 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D     +F L D  G  + LR D+TAP+AR  A        P R      VFR ++ 
Sbjct: 60  AIADH---RLFKLLDQQGHTLVLRPDMTAPIARVAASRLYEDGNPLRLAYNANVFRAQQR 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G    TADAE+  +M   L+ VG+    + + + +   ++ +  
Sbjct: 117 EGGRPAEFEQIGVELIGDGTVTADAEVISLMVALLKRVGL--GRFSVAVGHIGYVNALFL 174

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I  + +                       ++  L E       +  K   L+S     +
Sbjct: 175 EILGNEERASV-------------------LRRFLYEKNYVGYREHVKSWPLSSIDQKRL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  LS+     + E  + +  +  G +  +EL  +   +R  G     +K+   +V  + 
Sbjct: 216 LDLLSLRGGTDVIEQAKTLVTSEEGRRSADELAALMAALRTYGVAE-AVKLDMALVSHMS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++E                   +G GGRYD L+++F  +  PATGF + + RLI 
Sbjct: 275 YYTGILFEVYAEQVGF----------PIGNGGRYDDLLAKFS-RPAPATGFGLRVDRLIE 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           A+   +             I  +    + L++     ++ R  G R  +   + 
Sbjct: 324 AIGETDVRD---------DIECIVFSQERLAEAVELAEVKRAEGKRVVLQHIAG 368


>gi|295401544|ref|ZP_06811513.1| histidyl-tRNA synthetase 2 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109531|ref|YP_003987847.1| histidyl-tRNA synthetase 2 [Geobacillus sp. Y4.1MC1]
 gi|294976456|gb|EFG52065.1| histidyl-tRNA synthetase 2 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214632|gb|ADP73236.1| histidyl-tRNA synthetase 2 [Geobacillus sp. Y4.1MC1]
          Length = 393

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 166/409 (40%), Gaps = 46/409 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK  +  E P G  D       I+ R+  ++    E +G++ IETP LEY +++G   
Sbjct: 1   MTKKLFM-FEKPLGMRDTLPFLYEIKKRVRQAMVREIETWGYELIETPTLEYYETVGAAS 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             +D     +F L D  G  + LR D+TAP+AR  A        P R      VFR ++ 
Sbjct: 60  AIDDH---QLFKLLDQQGHTLVLRPDMTAPIARLAASRLYQDGNPLRLAYNANVFRAQQR 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G     ADAE+  +M   L+  G++  ++ + I +   ++ +  
Sbjct: 117 EGGRPAEFEQIGVECIGDGTVAADAEVISVMIAALKQTGLR--NFTVAIGHIGYVNALFL 174

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I  + +                       ++  L E       +  K   L+S     +
Sbjct: 175 EILGNEERASV-------------------LRRFLYEKNYVGYREHVKSLPLSSIDQKRL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L +       E    +  +  G++  +EL  ++  ++  G     +KI  ++V  + 
Sbjct: 216 LQLLHLRGNDKTMENARELVHSEEGKRAVDELCELASALQLYGV-DGAVKIDMSLVSHMS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++E                   +G GGRYD L+ +F  +  PATGF + + RLI 
Sbjct: 275 YYTGILFEVYAEHVGF----------PIGNGGRYDELLEKFS-RKAPATGFGVRVDRLIE 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           AL   E+            I  +    +  ++     +  R  G R  +
Sbjct: 324 ALGESEAEA---------AIECIVFSQERFAEALELARTKRREGKRVVL 363


>gi|291550325|emb|CBL26587.1| ATP phosphoribosyltransferase regulatory subunit [Ruminococcus
           torques L2-14]
          Length = 419

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 88/458 (19%), Positives = 158/458 (34%), Gaps = 52/458 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +   P G  D   +E  I+  +   +  +   YG+  I+TP  EY D   K +       
Sbjct: 4   KLHTPEGVRDIYNRECAIKLALQKKLNTVLHLYGYQDIQTPTFEYFDVFRKEIGSTSI-- 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++   D +G  ++LR D+T  +AR VA  F+T  FP R    G  F N     GR ++
Sbjct: 62  RDLYKFFDREGNILALRPDITPSIARAVATLFETENFPIRLCYAGNTFINHSSYRGRLKE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q   + +G  +  ADAEM  M+ D L+  G+K     + I +   +  + E   L  +
Sbjct: 122 NTQLGAELIGVDSIEADAEMLAMVVDGLKKTGLKEFQ--VSIGHVDFIQSLFEATNLEDE 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            K                   + ++ L+         +      +  +  +       + 
Sbjct: 180 QK-------------------EEIRTLIANRNFFGVEEILDHYEIDDQVKEAFHQLPELT 220

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
               +      +    A       L  I +L++  G   + +    ++     YYTG ++
Sbjct: 221 GGPEILADAGRIAPGEAARLAVERLRQIYDLLKIYGV-EDHVTFDLSMSGSYGYYTGIIF 279

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 +V  GGRYD L+ +F  +  P+ GF+I +  L+ AL   + 
Sbjct: 280 RAYT----------YGTGDAVVRGGRYDHLLEKFG-KKTPSIGFAIILDELMSALDRQKI 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM----FLGSSKNFGNQLKY 423
                     V          +        +  R  G   EM         + F     Y
Sbjct: 329 KVETGHRNLLVY------TDATEQWAISLARSFRAKGKNVEMMKRNSWDERETFEA---Y 379

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             R +    +           +++ +L  G+E     K
Sbjct: 380 GKRSSVASMLYLRED----RKIEVINLQTGEEKLVNTK 413


>gi|62467673|gb|AAX84020.1| histidyl-tRNA synthetase [Streptococcus pasteurianus]
          Length = 126

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 4/126 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      +    R  ++ Y +  I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPSESAKWQYVEAVARETFKKYNYSEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
             K ++   D   + I+LR + TAP+ R   EN      +  P + Y IG +FR E+   
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSFVENKLFAPEVQKPVKMYYIGSMFRYERPQA 120

Query: 123 GRFRQF 128
           GR R+F
Sbjct: 121 GRLREF 126


>gi|325681393|ref|ZP_08160919.1| ATP phosphoribosyltransferase, regulatory subunit [Ruminococcus
           albus 8]
 gi|324106883|gb|EGC01173.1| ATP phosphoribosyltransferase, regulatory subunit [Ruminococcus
           albus 8]
          Length = 399

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 162/439 (36%), Gaps = 47/439 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +    P G  D   ++   R ++  ++  ++E +G+  + TP +E+ D+     
Sbjct: 1   MKRYDLI---TPEGTRDLLFEDCLARRKVEKTLAALFEGFGYSEVVTPGIEFYDAF--SG 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              +   + ++ L D  G+ I LR D T P+AR  A        P R Y    VF N   
Sbjct: 56  SARNFRQESLYKLTDSKGRLIVLRPDSTIPIARLAATRLKESDTPLRLYYNQSVFSNNAL 115

Query: 121 GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
             GR  + +Q  ++ + G + + AD E+     + L +    + ++ + I +      ++
Sbjct: 116 LKGRSDEVVQAGIELIGGDNEKRADLEVLCTAVEALASFD--KENFRLEIGHIGYFKELV 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            ++ L  D                    ++ ++LL+         D        ++    
Sbjct: 174 AQLNLDEDV-------------------IEEIRLLISSKNFPALNDLLDEIG-DNDITRA 213

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +    S+     + +    +            L  +   +   GY   +I +   IV   
Sbjct: 214 LKQLPSLFGGVEVLDKASDIYANDKITGILYNLRQVFNRLSSLGY-EGKISVDLGIVSHT 272

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +YYTG V++  L     +          V  GGRYD L+  F  + +PA GF + +  + 
Sbjct: 273 DYYTGIVFKGYLSEVGQS----------VLKGGRYDNLIGSFG-KEMPAVGFGVNVDSVA 321

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L+ + +S              +  D   + +   Y Q L   G + E  L +  ++  
Sbjct: 322 LHLERIGASPAGKPVDA-----VIFGDKGFVVEAMAYAQKLVREGSKVEHSLFN--SYEE 374

Query: 420 QLKYADRRNCPLAIIQGTG 438
            ++YA  +     I  G  
Sbjct: 375 TVEYAKSKGIKKVIRVGED 393


>gi|240144137|ref|ZP_04742738.1| ATP phosphoribosyltransferase, regulatory subunit [Roseburia
           intestinalis L1-82]
 gi|257203838|gb|EEV02123.1| ATP phosphoribosyltransferase, regulatory subunit [Roseburia
           intestinalis L1-82]
 gi|291536215|emb|CBL09327.1| ATP phosphoribosyltransferase regulatory subunit [Roseburia
           intestinalis M50/1]
 gi|291538919|emb|CBL12030.1| ATP phosphoribosyltransferase regulatory subunit [Roseburia
           intestinalis XB6B4]
          Length = 394

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 82/408 (20%), Positives = 156/408 (38%), Gaps = 44/408 (10%)

Query: 7   LRAEL---PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           ++ +L   P G  D    E   +  + D +  + + YG+ PI+TP  E+ D+ G+ +   
Sbjct: 1   MKRQLLHTPEGVRDIYNDECEKKLILQDELLKVQKQYGYHPIQTPTFEFFDTFGREIGTT 60

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
             P+K ++   D +G  + LR D+T  +AR  A  F     P R   +G  F N     G
Sbjct: 61  --PSKDLYKFFDREGNTLVLRPDITPSIARCAAMYFGEEKMPIRLCYMGNTFLNNSSYQG 118

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R ++  Q   + +G S   ADAE+  M+ D L+  G+K     + + + +   G+ +  G
Sbjct: 119 RLKESTQLGAELLGDSTVDADAEIIAMVIDCLKKAGLKEFQ--LSVGHAEFFRGLTDAAG 176

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           L  + +                   + +  L+         +F +  +L      +    
Sbjct: 177 LKEEQE-------------------EELHDLISNKNYFGVTEFAETLSLNDNLKALFGML 217

Query: 244 LSI-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            ++      +    +              L  + ++++  G +   + +   IV   +YY
Sbjct: 218 GNLYTGSDELQTAKKYASEYPRILAAIERLEELHQVLKIYGIDK-YVSVELGIVSNYQYY 276

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG ++                    +  GGRYD L++ F  +   + GF+I I +L+ AL
Sbjct: 277 TGIIFAGYTF----------GSGEPIVKGGRYDELLTYFG-KESASIGFAIVIDQLMAAL 325

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
              +       +        + +DS   S+       LRT G   E+ 
Sbjct: 326 SRQKIEIPVQYQNE-----LIIYDSKMRSEAIKKAMELRTDGRNVELM 368


>gi|194384846|dbj|BAG60829.1| unnamed protein product [Homo sapiens]
          Length = 334

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 35/308 (11%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           + E L  L+  D L K   + V+            +      L  E  D +  ++     
Sbjct: 57  MCEILSGLQLGDFLIKMAWKDVR-----------HEMVVKKGLAPEVADRIGDYVQCHGG 105

Query: 250 KSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            S+ E       +       +G  +L ++ E +   G  +++I    ++ RGL+YYTG +
Sbjct: 106 VSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGI-ADKISFDLSLARGLDYYTGVI 164

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALKS 364
           YEA+L        ++P+  GSV  GGRYDGL  +   KG  VP  G SIG+ R+   ++ 
Sbjct: 165 YEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERIFYIVEQ 224

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
              +           +       + L +       L  +GI+AEM   ++     QL Y 
Sbjct: 225 RMKTKGEKVRTTETQVFVATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKLLTQLHYC 284

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           +    PL +I G  E   G+++I+ +A  +E++                  I     V+ 
Sbjct: 285 ESTGIPLVVIIGEQELKEGVIKIRSVASREEVA------------------IKRENFVAE 326

Query: 485 VKKILQEN 492
           ++K L E+
Sbjct: 327 IQKRLSES 334


>gi|289668880|ref|ZP_06489955.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 330

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 110/353 (31%), Positives = 172/353 (48%), Gaps = 48/353 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDR 65
           ++   P G  +   +E     R+LD IR  YE +GF PIETP+ E SD  L K   + +R
Sbjct: 2   IKPRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPIETPVFELSDVLLTKSGGETER 61

Query: 66  PNKGVFSLQD----------------DDG-QWISLRYDLTAPLARYVAENFDTIVFPCRT 108
               V+ +Q                 + G   ++LR+DLT PLARYVAE+   + FP R 
Sbjct: 62  ---QVYFVQSTGALANAAAAADEGAENGGLPELALRFDLTVPLARYVAEHEHDLSFPFRR 118

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y++  V+R E+   GRFR+F QCD+D +G  A +   +  ++         +   D+ + 
Sbjct: 119 YQMQRVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFRVQ 178

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           +NNRK+L G  E +G+   +    +L VLR +DK+DK G   V+  L            +
Sbjct: 179 LNNRKLLRGFFESLGVAEGE---LQLAVLREVDKIDKRGADYVRDTL----------VGE 225

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYEL------VKGTIAGEKGFNELVVISELVRKS 282
           G  + +EQ+  +++F+++  E     L +L      V  +    +G  EL  + ELV+  
Sbjct: 226 GFGIAAEQVAKILAFVAVRSEGHADALAQLQALEASVGASATLGEGIAELREVLELVKAL 285

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
           G   +   ++ +I RGL+YYTG VYE  L              GS+  GGRY+
Sbjct: 286 GVPESAYCLNFSIARGLDYYTGTVYETTLTD--------HPQIGSICSGGRYE 330


>gi|163814111|ref|ZP_02205503.1| hypothetical protein COPEUT_00264 [Coprococcus eutactus ATCC 27759]
 gi|158450560|gb|EDP27555.1| hypothetical protein COPEUT_00264 [Coprococcus eutactus ATCC 27759]
          Length = 420

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 88/434 (20%), Positives = 165/434 (38%), Gaps = 41/434 (9%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P G  D    E + + ++++ + +I E Y +  IETP  E+ D   +       P+ 
Sbjct: 6   LQTPDGVRDTYDVECKKKRKVMNELHHILELYSYHDIETPTFEFFDIFNRDKGSA--PSN 63

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++   D D   + LR D+T  +AR VA+ +    FP R    G  + N     G+ ++ 
Sbjct: 64  EMYKFFDRDNNTLVLRPDITPSIARCVAKYYADEEFPVRLCYTGNTYTNTLKLQGKLKEV 123

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +   +  ADAE+   + D    +GIK  D+ I I       G++ + G+  ++
Sbjct: 124 TQIGAELINDDSSAADAEIIATVIDCFNEIGIK--DFQIEIGQIDYFKGLVAESGISEEE 181

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +                     +K  +         ++    +++        SF S+  
Sbjct: 182 E-------------------DQIKEYIHIKNFFGLEEYVDALDISDSLKKAFSSFDSLFG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
             +M +  E         +    L  + E +   GY    I     ++ G  YYTG ++ 
Sbjct: 223 GVAMLDTAESYVSNETSLEAVKRLRRVYEALECYGY-EKHISFDLGMLDGYNYYTGIIFR 281

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                             +V  GGRY+ L+ +F  ++ P+ GF+  +  LI+A+      
Sbjct: 282 GYT----------YGTGDAVVKGGRYNNLLKQFG-KDAPSIGFAFTVEELIMAMNRQNIK 330

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS-SKNFGNQLKYADRR 427
            +       +L    + D     K       LR+ G + E+   S  K+  + L+YA R 
Sbjct: 331 IHVEYSNTIILYNIEEQD-----KAIKTGMKLRSEGCKIELIRKSQKKSIEDYLEYARRE 385

Query: 428 NCPLAIIQGTGERS 441
           +    I     E +
Sbjct: 386 HFSGLIYFDQKELA 399


>gi|317471801|ref|ZP_07931139.1| ATP phosphoribosyltransferase [Anaerostipes sp. 3_2_56FAA]
 gi|316900727|gb|EFV22703.1| ATP phosphoribosyltransferase [Anaerostipes sp. 3_2_56FAA]
          Length = 403

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 79/417 (18%), Positives = 159/417 (38%), Gaps = 45/417 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K   R   P G  D    E + R R+ D + +++  YG++ I TP  E+ D      
Sbjct: 1   MNQK---RVHTPEGVRDIYGLECKKRLRLKDKLNHVFALYGYENIITPTFEFFDIFN--S 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 +K ++   D +G  + LR D+T  +AR VA+ +D+     R    G VF N   
Sbjct: 56  EKGTVSSKEMYKFFDREGNTLVLRPDITPSVARCVAKYYDSEERNLRFAYTGNVFLNNSS 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              + ++  Q   + +   +   D E+  M  D     G+K  D+ + I   +   G++E
Sbjct: 116 YQLKLKETCQMGAELINDPSSHGDGEIIAMALDCCLNAGLK--DFRLTIGQVEYFQGLVE 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 D K                   + ++ L+         +F +  ++     D+ 
Sbjct: 174 -CIEDEDVK-------------------EQLRELIINKNFFGLIEFVESLDIPQAVKDVF 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + F  ++ +  + +  + +      ++   +L  +  +++  G     I     ++    
Sbjct: 214 IQFNELNGDVDILDKADALVSNETSKRAIRKLRKVYRMLQVYG-LEQYISFDLGMLSRHN 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++A                 +V  GGRYD L+ +F  +  P+ GF+I +  L++
Sbjct: 273 YYTGVIFKAYT----------YGTGDAVLKGGRYDNLIEQFG-KKAPSIGFAIVLDSLMM 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           A++              ++I        ++     Y    R  G +A +     +N 
Sbjct: 322 AMERQ-KIEMEADSTDMLIIYEEAAMEAAIPAAAGY----RKKG-KAVILEKKDRNL 372


>gi|237800044|ref|ZP_04588505.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022899|gb|EGI02956.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 258

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 32/258 (12%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             D   ++  +      ++  + +NYG+  I  P++E+++   + + +  D   K +++ 
Sbjct: 1   MNDILPEQTPLWRHFEGTVSRLLDNYGYRQIRMPIVEFTELFKRSIGEVTDIVEKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D +G  ++LR + TA   R V E+  T      + + IGP+FR+E+   GR+RQF Q  
Sbjct: 61  ADRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQKGRYRQFHQIG 120

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDGILEKIG 183
           V+         DAE+ +M       +GI+                   R  L   L    
Sbjct: 121 VEVFNLDGPDIDAELIVMTWRLWGMLGIRNAVKLELNSLGTSEARARYRDALVEFLSARL 180

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              D+            D   +     +++L  +     +                +  +
Sbjct: 181 EQLDE------------DSQRRLKTNPLRVLDTKHPETQAVLV---------DAPKLADY 219

Query: 244 LSIDLEKSMHELYELVKG 261
           L  +       L   +  
Sbjct: 220 LDDESRVHFEGLKARLDA 237


>gi|83590867|ref|YP_430876.1| ATP phosphoribosyltransferase regulatory subunit [Moorella
           thermoacetica ATCC 39073]
 gi|109892213|sp|Q2RGV6|HISZ_MOOTA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|83573781|gb|ABC20333.1| ATP phosphoribosyltransferase regulatory subunit [Moorella
           thermoacetica ATCC 39073]
          Length = 389

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 89/416 (21%), Positives = 159/416 (38%), Gaps = 47/416 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M   + L  +LP G +D    E     ++   + N + ++G+  + TP  E++ +     
Sbjct: 1   MA--SNLPLQLPAGVSDLLPPEAAALRQLEQRLLNCFRSWGYQEVMTPTFEFATTFQAGS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           P  +     ++   D  G+ ++LR ++TAP+AR VA +      P R      VFR E+ 
Sbjct: 59  PAGEEG--ALYKFIDRQGRVLALRPEMTAPIARLVATSLRRRELPLRLGYSARVFRYEEP 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+F Q  V+ +G+     D E+  +  ++L   G+   D+ +G+    +  G+L+
Sbjct: 117 QAGRRREFHQAGVELIGAGGVAGDVEIIALAVESLAQAGL--EDFRLGLGQVAVTKGVLQ 174

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L  +                    + G+K  L               +L  E+   +
Sbjct: 175 DLALPPEA-------------------VAGIKSALASKDLVALERIYDEYHLEGERRRRL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
               +I   +   E      G  A      EL  + E +  +G     + I   I+R  +
Sbjct: 216 ELLATIHGGREALEEARACFGRTAAAASLAELSRVWEALGAAG-LEKWLFIDLGILRDFD 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E  +          P +   V GGGRYDGL+++F          +     L  
Sbjct: 275 YYTGIVFEGYV----------PGLGAPVCGGGRYDGLLAQFGY----PCPATGFALGLER 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
            L +   +       G         D   L+      + LR+ G    +  G S++
Sbjct: 321 LLLARGETAPASLAGGY---LVAGRD---LAALLKRARELRSKGTAVVLD-GESRS 369


>gi|167746988|ref|ZP_02419115.1| hypothetical protein ANACAC_01700 [Anaerostipes caccae DSM 14662]
 gi|167653948|gb|EDR98077.1| hypothetical protein ANACAC_01700 [Anaerostipes caccae DSM 14662]
          Length = 403

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 79/417 (18%), Positives = 159/417 (38%), Gaps = 45/417 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K   R   P G  D    E + R R+ D + +++  YG++ I TP  E+ D      
Sbjct: 1   MNQK---RVHTPEGVRDIYGLECKKRLRLKDKLNHVFALYGYENIITPTFEFFDIFN--S 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 +K ++   D +G  + LR D+T  +AR VA+ +D+     R    G VF N   
Sbjct: 56  EKGTVSSKEMYKFFDREGNTLVLRPDITPSVARCVAKYYDSEERNLRFAYTGNVFLNNSS 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              + ++  Q   + +   +   D E+  M  D     G+K  D+ + I   +   G++E
Sbjct: 116 YQLKLKETCQMGAELINDPSSHGDGEIIAMALDCCLNAGLK--DFRLTIGQVEYFQGLVE 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 D K                   + ++ L+         +F +  ++     D+ 
Sbjct: 174 -CIEDEDVK-------------------EQLRELIINKNFFGLIEFVESLDIPQAVKDVF 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + F  ++ +  + +  + +      ++   +L  +  +++  G     I     ++    
Sbjct: 214 IQFNELNGDVDILDKADALVSNETSKRAIRKLRKVYRMLQVYG-LEQYISFDLGMLSRHN 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++A                 +V  GGRYD L+ +F  +  P+ GF+I +  L++
Sbjct: 273 YYTGVIFKAYT----------YGTGDAVLKGGRYDNLIEQFG-KKAPSIGFAIVLDSLMM 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           A++              ++I        ++     Y    R  G +A +     +N 
Sbjct: 322 AMERQ-KIEMEADSTDMLIIYEEAAMEAAIPAAAGY----RKKG-KAVILEKKDRNL 372


>gi|194389672|dbj|BAG61797.1| unnamed protein product [Homo sapiens]
          Length = 345

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 84/409 (20%), Positives = 148/409 (36%), Gaps = 74/409 (18%)

Query: 89  APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            P ARY+A N    V   + Y +G  +R E                            + 
Sbjct: 6   VPFARYLAMNK---VKKMKRYHVGKAWRRESPT------------------------IVQ 38

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
               +  +        +   I + + L  + E +              L+  D L K   
Sbjct: 39  GRYREFCQCDFDIAGQFDPMIPDAECLKIMCEIL------------SGLQLGDFLIKMAW 86

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL---YELVKGTIAG 265
           + V+            +      L  E  D +  ++      S+ E       +      
Sbjct: 87  KDVR-----------HEMVVKKGLAPEVADRIGDYVQCHGGVSLVEQMFQDPRLSQNKQA 135

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
            +G  +L ++ E +   G  +++I    ++ RGL+YYTG +YEA+L        ++P+  
Sbjct: 136 LEGLGDLKLLFEYLTLFGI-ADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNV 194

Query: 326 GSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTM 383
           GSV  GGRYDGL  +   KG  VP  G SIG+ R+   ++    +           +   
Sbjct: 195 GSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERIFYIVEQRMKTKGEKVRTTETQVFVA 254

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
               + L +       L  +GI+AEM   ++     QL Y +    PL +I G  E   G
Sbjct: 255 TPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQELKEG 314

Query: 444 MLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           +++I+ +A  +E++                  I     V+ ++K L E+
Sbjct: 315 VIKIRSVASREEVA------------------IKRENFVAEIQKRLSES 345


>gi|239828296|ref|YP_002950920.1| ATP phosphoribosyltransferase regulatory subunit [Geobacillus sp.
           WCH70]
 gi|259709913|sp|C5D7P4|HISZ_GEOSW RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|239808589|gb|ACS25654.1| histidyl-tRNA synthetase 2 [Geobacillus sp. WCH70]
          Length = 392

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 166/414 (40%), Gaps = 46/414 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK  +  E P G  D       I+ R+  ++    E +G++ IETP LEY +++G   
Sbjct: 1   MTKKLFM-FEKPLGMRDTLPFLYEIKKRVRQAMIREIETWGYELIETPTLEYYETVGTVS 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             +D     +F L D  G  + LR D+TAP+AR  A        P R      VFR ++ 
Sbjct: 60  AIDDH---QLFKLLDQQGHTLVLRPDMTAPIARLAASRLYKEGNPLRLAYNANVFRAQQR 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G     ADAE+  +M   L   G++   + + I +   ++ +  
Sbjct: 117 EGGRPAEFEQIGVECIGDGTVAADAEVISVMIAALRQAGLQ--HFTVTIGHIGYVNALFL 174

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I  + +                       ++  L E       +  K   L+S     +
Sbjct: 175 EIVGNEERASV-------------------LRRFLYEKNYVGYREHVKSLPLSSIDQKRL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L +       E  + +  +  G++  ++L  +S  ++  G   + +KI  T+V  + 
Sbjct: 216 LQLLHLHGNDMTMEEAKELVHSEEGKRAVDDLCELSNALQLYGV-DDVVKIDMTLVSHMS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++E                   +G GGRYD L+ +F  +  PATGF I + RLI 
Sbjct: 275 YYTGILFEVYAEHVGF----------PIGNGGRYDELLEKFS-RKAPATGFGIRVDRLIE 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           AL   E             I  +    +  ++     +  R  G R  +   S 
Sbjct: 324 ALGESE---------EEAAIECIVFSQERFAEAIELARTKRREGKRVVLQHISG 368


>gi|221632656|ref|YP_002521877.1| histidyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156682|gb|ACM05809.1| histidyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 480

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 99/495 (20%), Positives = 176/495 (35%), Gaps = 76/495 (15%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  RG  D P    R R  +L  I  + E +G++ IETP+LE ++   +    E     
Sbjct: 13  LERLRGMQDTPPALHRRRQAVLHRIARVLERHGYEFIETPILESTELFLRKSGPERIAQL 72

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             FS +    + I+LR + TA + RY  E+      P R    GPVFR E+   GR RQF
Sbjct: 73  YAFSFR---NRDIALRPEHTASILRYYVESRQNDPLPLRFAYAGPVFRYERPQAGRTRQF 129

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            +   + +G+   + DAE+  + A+ LEAVGI      I I +  I+   L  + L    
Sbjct: 130 TEIGGELLGAPGPSGDAEVIHLAAEILEAVGIM---PRIVIGHVGIVLDYLAHLPLRQRA 186

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS-GDFTKGANLTSEQIDIM------- 240
           +      + R            +   +          +      LT+E ++ +       
Sbjct: 187 RDWLLWSMERLRKGQTIDIESELPAFVDSTDIVQITQEVRTKLALTTEDLERLILALLRE 246

Query: 241 -----------------------------------------VSFLSIDLEKSMHELYELV 259
                                                    ++ LS   +  +  L  +V
Sbjct: 247 VGVPMTGASRQPEEIVRGVLAKLQRSADPDALRQALAFARELASLSGPPDDVLSALRRIV 306

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
           +          ++  + + +   G  ++RI ++  + RGL YYTG ++E           
Sbjct: 307 ERYGLSPAPLQQIDEVLDQLAAYGLETDRIVLAPGMARGLHYYTGILFEMYSQTDEG--- 363

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
                   + GGGRYD L      +         G    I    +L+             
Sbjct: 364 ------LQLCGGGRYDDLAQLLGARQPLPACGFAGGLERIADASALQ-------PKTEPR 410

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +     D  +++    + + LR +G   E+ +   ++  +  +YA RR     +I     
Sbjct: 411 LLVTAADRSAITAATRFAEQLRASGAIVELDVRQ-RSLSSNRRYARRRGVTEILIVD--- 466

Query: 440 RSRGMLQIKDLAKGK 454
            + G ++  DL+  +
Sbjct: 467 -ATGSVRRIDLSTEE 480


>gi|291535083|emb|CBL08195.1| histidyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 416

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 116/426 (27%), Positives = 193/426 (45%), Gaps = 48/426 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G  D   +E++IR+ +   I+  Y ++GF PIETP +E   +L      E+   K 
Sbjct: 6   KPVNGMKDILPEEMQIRDYVQQVIKETYRSFGFTPIETPCMENIANLSNKQGGEN--EKL 63

Query: 70  VFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           +F +     +                +RYDLT PL R+ + N + +  P +  ++G V+R
Sbjct: 64  IFKVMKRGEKLKVAEAKEEADLVDFGMRYDLTVPLVRFYSNNANDLPSPFKAIQMGNVWR 123

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            ++   GR+RQF+QCD+D +G     A+ E+ +    T+  +G K  ++ I IN R+IL 
Sbjct: 124 ADRPQRGRYRQFMQCDIDIIGEPTNLAEIELILATTTTIGKLGFK--NFEIRINERRILK 181

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
            +    G   +D       V   +DK+DK GL GV   L +                 E 
Sbjct: 182 AMAAYSGFAEED----FDTVFIILDKMDKIGLDGVAEELEKE------------GYAKES 225

Query: 237 IDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           I+  ++      + E  +  L + ++G +  E   N L +I + V  +   S ++    T
Sbjct: 226 IEKYLALFKGVEEAENGIKYLAKTLEGYLDPEVERNLLEII-DTVEGAKAASFKMVFDPT 284

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRG+ YYTG ++E             P +  + GGGGRYD +V +F GQ+VPA GFSIG
Sbjct: 285 LVRGMSYYTGTIFEI----------SMPELGAACGGGGRYDKMVGKFTGQDVPACGFSIG 334

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGS 413
             R+I+ L      T   +      +      ++ L +     Q  R AG +  +  +  
Sbjct: 335 FERIILLLMESG-FTVPTQRPKVAYLIEKGCPAEKLGEIIGKAQEERAAGKQVLVVRMNK 393

Query: 414 SKNFGN 419
           +K F  
Sbjct: 394 NKKFQK 399


>gi|112961341|gb|ABI28300.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961344|gb|ABI28302.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961347|gb|ABI28304.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961350|gb|ABI28306.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961353|gb|ABI28308.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961356|gb|ABI28310.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961359|gb|ABI28312.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961362|gb|ABI28314.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961365|gb|ABI28316.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961368|gb|ABI28318.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961371|gb|ABI28320.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961374|gb|ABI28322.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961377|gb|ABI28324.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961380|gb|ABI28326.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961383|gb|ABI28328.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961386|gb|ABI28330.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961389|gb|ABI28332.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961392|gb|ABI28334.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961395|gb|ABI28336.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961398|gb|ABI28338.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961401|gb|ABI28340.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961404|gb|ABI28342.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961407|gb|ABI28344.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961410|gb|ABI28346.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961413|gb|ABI28348.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961416|gb|ABI28350.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961419|gb|ABI28352.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961422|gb|ABI28354.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961425|gb|ABI28356.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961428|gb|ABI28358.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961431|gb|ABI28360.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961434|gb|ABI28362.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961437|gb|ABI28364.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961440|gb|ABI28366.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961443|gb|ABI28368.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961446|gb|ABI28370.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961449|gb|ABI28372.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961452|gb|ABI28374.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961455|gb|ABI28376.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961458|gb|ABI28378.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961461|gb|ABI28380.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961464|gb|ABI28382.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961467|gb|ABI28384.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961470|gb|ABI28386.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961473|gb|ABI28388.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961476|gb|ABI28390.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961479|gb|ABI28392.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961482|gb|ABI28394.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961485|gb|ABI28396.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961488|gb|ABI28398.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961491|gb|ABI28400.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961494|gb|ABI28402.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961497|gb|ABI28404.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961500|gb|ABI28406.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961503|gb|ABI28408.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961506|gb|ABI28410.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961509|gb|ABI28412.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961512|gb|ABI28414.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961515|gb|ABI28416.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961518|gb|ABI28418.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961521|gb|ABI28420.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961524|gb|ABI28422.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112961527|gb|ABI28424.1| histidyl-tRNA synthetase [Listeria monocytogenes]
          Length = 113

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 3/113 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +LPRG  D   +E+   + +    + + ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1   MDLQLPRGTRDILPEEVSKWHFLETEFKKVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFR 116
            +K +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR
Sbjct: 61  VSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFR 113


>gi|311031887|ref|ZP_07709977.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus sp.
           m3-13]
          Length = 396

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 89/409 (21%), Positives = 154/409 (37%), Gaps = 45/409 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M        E P G  D        +  + +++      +G+  +ETP LEY ++     
Sbjct: 1   MSNSKLFMFEKPLGMRDTLPSLYEAKQNVKNTMTAEISQWGYQFMETPTLEYYET---VG 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 ++ +F L D  G  + LR D+TAP+AR  A       +P R      VFR +++
Sbjct: 58  EASAILDQQLFKLLDQQGHTLVLRPDMTAPIARVAASRLLNEGYPQRLAYSANVFRAQQN 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G  + +ADAEM  ++   L+  G+    + + I +   L  I  
Sbjct: 118 EAGRPAEFEQIGVECIGDRSISADAEMIALLVALLKNTGLS--TFTVAIGHIGFLQEIFL 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            I  + +                       ++  L E       +  K   L+S     +
Sbjct: 176 DIVGNEERAA-------------------TLRRYLYEKNYVGYREHVKNLPLSSIDKKRL 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           ++ L++  + S  EL + V    AG+K   EL  +  ++   G     +K+   IV  + 
Sbjct: 217 LNLLTLRGDSSNIELAKEVLDGDAGKKAIQELEQLWTMLEAYGVAE-FVKLDLNIVSHMS 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA  G               +G GGRYD L  +F  +       +     L  
Sbjct: 276 YYTGIVFEAYAGNIGF----------PIGNGGRYDKLFQKFNREKS----ATGFGIHLDR 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
            L++             V I  +    +   +   +    R AG +  +
Sbjct: 322 LLEAKGVKKAE------VKIHGVLFSQERREEAIAFATSKREAGEKVIV 364


>gi|291539596|emb|CBL12707.1| histidyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 416

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 116/426 (27%), Positives = 193/426 (45%), Gaps = 48/426 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G  D   +E++IR+ +   I+  Y ++GF PIETP +E   +L      E+   K 
Sbjct: 6   KPVNGMKDILPEEMQIRDYVQQVIKETYRSFGFTPIETPCMENIANLSNKQGGEN--EKL 63

Query: 70  VFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           +F +     +                +RYDLT PL R+ + N + +  P +  ++G V+R
Sbjct: 64  IFKVMKRGEKLKVAEAKEEADLVDFGMRYDLTVPLVRFYSNNANDLPSPFKAIQMGNVWR 123

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            ++   GR+RQF+QCD+D +G     A+ E+ +    T+  +G K  ++ I IN R+IL 
Sbjct: 124 ADRPQRGRYRQFMQCDIDIIGEPTNLAEIELILATTTTIGKLGFK--NFEIRINERRILK 181

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
            +    G   +D       V   +DK+DK GL GV   L +                 E 
Sbjct: 182 AMAAYSGFAEED----FDTVFIILDKMDKIGLDGVAEELEKE------------GYAKES 225

Query: 237 IDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           I+  ++      + E  +  L + ++G +  E   N L +I + V  +   S ++    T
Sbjct: 226 IEKYLALFKGVEEAENGIKYLAKTLEGYLDPEVERNLLEII-DTVEGAKAASFKMVFDPT 284

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRG+ YYTG ++E             P +  + GGGGRYD +V +F GQ+VPA GFSIG
Sbjct: 285 LVRGMSYYTGTIFEI----------SMPELGAACGGGGRYDKMVGKFTGQDVPACGFSIG 334

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGS 413
             R+I+ L      T   +      +      ++ L +     Q  R AG +  +  +  
Sbjct: 335 FERIILLLMESG-FTVPTQRPKVAYLIEKGCPAEKLGEIIGKAQEERAAGKQVLVVRMNK 393

Query: 414 SKNFGN 419
           +K F  
Sbjct: 394 NKKFQK 399


>gi|295696758|ref|YP_003589996.1| histidyl-tRNA synthetase 2 [Bacillus tusciae DSM 2912]
 gi|295412360|gb|ADG06852.1| histidyl-tRNA synthetase 2 [Bacillus tusciae DSM 2912]
          Length = 417

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 83/401 (20%), Positives = 161/401 (40%), Gaps = 43/401 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E P G  D      R +  +  + + ++  +G+  + TP +E+ ++           
Sbjct: 1   MIFEKPHGVKDYLPPWARRKRELEAACQRVFRRWGYQELITPTMEFLETFQNGALRSGED 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              VF + D  G+ + LR D+TAP+AR VA        P R      +FR ++   GR  
Sbjct: 61  R--VFKMIDRSGRTVVLRPDMTAPIARVVASELAAEPLPIRLSYTAAIFRRQERVAGRDA 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  ++ +G  +  ADAE+  +   TLE  G++   + + + +   L+G+  +     
Sbjct: 119 EFTQAGIELIGDGSVDADAEVIALAVRTLEEAGVRV--FRLAVGDVGFLEGLFAE----- 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                             +   + ++  L +          + A L     + + +   +
Sbjct: 172 ---------------HAGEPLAERLRSRLVKQDFVGFEQELEDAELPEASRETLRAVPGL 216

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                + E   L+      ++  + +  + E++   G  S+R++I  +++  L YYTG +
Sbjct: 217 RGGPEVVERARLLTTHPRAKRSLDRMWELWEIIGLYGV-SDRVQIDLSLMLDLSYYTGMI 275

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +E               V   V  GGRYD L+ RF  ++ PATGF IG+ R++ AL+   
Sbjct: 276 FEGYAS----------GVGFPVCAGGRYDELLERFGRRS-PATGFMIGVERVLDALERE- 323

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                     PV++  + +      +   +   LR  G   
Sbjct: 324 ------APSPPVVVPRIHYVPQRRQEAVAFALWLREKGRNV 358


>gi|159900352|ref|YP_001546599.1| histidine--tRNA ligase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893391|gb|ABX06471.1| Histidine--tRNA ligase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 466

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 104/499 (20%), Positives = 192/499 (38%), Gaps = 86/499 (17%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +L  E+ RG  D     +  R  ++ ++   ++  G+DPIE PLLE+ +   K   D+  
Sbjct: 4   QLTPEVVRGTRDLFAAAVHQRQALIQTLTATFDQAGYDPIELPLLEHRELYLKKSGDDLI 63

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               ++      G+ ++LR + TA + R V         P R    GPVFR E+     +
Sbjct: 64  AK--LYHWN-QGGRDLALRPEWTASVLRAVISGMGDAPIPLRLRYAGPVFRYERPRRATY 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQF Q  ++ +G+    ADAE   +    L  +GI+   + + I +  ++  +L  +GL 
Sbjct: 121 RQFTQVGIELIGAPGPLADAEALGLAVTGLRELGIQ--QWTLTIGHIGVIKTLLNSLGLP 178

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV---- 241
                     +  +++++   GL  VK    +   D   D    A+L  + ++ ++    
Sbjct: 179 ER----ITSALTWSLERIRSKGLDAVKQQWRDDDDDLPVDLASLAHLADQDLETLLLRVL 234

Query: 242 -----------------------------SFLSID---------------LEKSMHELYE 257
                                          L++D                   M ++ E
Sbjct: 235 PSLGVRLDSGGREPQAIIQRLVRKLRRGDDALNLDRAWQLLSALTAARGSAPDVMQQMRE 294

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
           L +         +EL     L+   G  +++I +   + RGL YYTG ++E      +  
Sbjct: 295 LCQEYTVAPDALDELQTTLTLLEAYGVPADQIVLDFGMGRGLHYYTGLIFEIDGADGL-- 352

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
                     + GGGRYD LV+   G+ +PA GF+ G+ R++ A+   E +         
Sbjct: 353 ---------QLCGGGRYDDLVAALGGRAMPAVGFAYGLERIVAAVAPAEIAPVK------ 397

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +  +  D   + +       LR  G R  + L   +++   L  A RR      +   
Sbjct: 398 -SVLVVGDDHGLVIQA---AAALRQQGYRTAVDLRQ-RSYAANLNDARRREMSHLALVSV 452

Query: 438 GERSRGMLQIKDLAKGKEL 456
                  +Q++DL   ++ 
Sbjct: 453 DG-----IQLRDLN--EQK 464


>gi|238916495|ref|YP_002930012.1| histidyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238871855|gb|ACR71565.1| histidyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 424

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 111/447 (24%), Positives = 185/447 (41%), Gaps = 60/447 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++    +G  D    E+ IR+ + + I  +Y   GF+ I TP++E  ++L K    E+  
Sbjct: 1   MKITPVKGTNDYLPNEVEIRDYLQNEILKVYVANGFEHITTPIIEDIENLDKSDGGENLN 60

Query: 67  NKGVFSLQDDDGQ-----------------------WISLRYDLTAPLARYVAENFDTIV 103
              +F +     +                        + LRYDLT PL+RY A N D + 
Sbjct: 61  --LIFKIMKRGDKLEKAVSSLQENPKTGTACENEIADMGLRYDLTLPLSRYFANNKDKLT 118

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
            P +  ++  V+R E+   GR R+F+QCD+D +GS +  ++ E+ +     L+A+G+K  
Sbjct: 119 LPMKCIQMDRVYRAERPQKGRLREFVQCDIDIIGSDSTDSEVELILTTTKALKAIGMK-- 176

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
           ++ + IN+R++L   L+  G   +    +   V    DK+DK GL GVK  L +   D  
Sbjct: 177 NFKVKINDRRLLRSFLQNCGFAEE----QLDSVCITFDKMDKVGLDGVKAELTDKGFD-- 230

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                     +  I+  + F             E V+  +  +     +  I   V +  
Sbjct: 231 ----------AAAIEKFIGFFGSVSSAQ-EISLESVEAILEDKAPAESVRGIINTVNELS 279

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
                +    ++VRG  YYTG V+E                 G++ GGGRYD L+ +F G
Sbjct: 280 DGQFDVVFDLSLVRGQGYYTGTVFEVESIDFK----------GAIAGGGRYDNLIGKFIG 329

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
           Q V A GFSIG  R+   L      T    +   V+      D   + +     +  R  
Sbjct: 330 QQVSAVGFSIGFERIFSILMQNGVETKASADKIAVMY-----DEGQVKEAYAIAEKYRAE 384

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCP 430
           G    +++   K  G  L   + R   
Sbjct: 385 GKVCSLYVK-PKKMGKFLGKLEERGYK 410


>gi|240143876|ref|ZP_04742477.1| histidine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257204137|gb|EEV02422.1| histidine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 416

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 116/426 (27%), Positives = 193/426 (45%), Gaps = 48/426 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G  D   +E++IR+ +   I+  Y ++GF PIETP +E   +L      E+   K 
Sbjct: 6   KPVNGMKDILPEEMQIRDYVQQVIKETYRSFGFTPIETPCMENIANLSNKQGGEN--EKL 63

Query: 70  VFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           +F +     +                +RYDLT PL R+ + N + +  P +  ++G V+R
Sbjct: 64  IFKVMKRGEKLKVAEAKEEADLVDFGMRYDLTVPLVRFYSNNANDLPSPFKAIQMGNVWR 123

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            ++   GR+RQF+QCD+D +G     A+ E+ +    T+  +G K  ++ I IN R+IL 
Sbjct: 124 ADRPQRGRYRQFMQCDIDIIGEPTNLAEIELILATTTTIGKLGFK--NFEIRINERRILK 181

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
            +    G   +D       V   +DK+DK GL GV   L +                 E 
Sbjct: 182 AMAAYSGFAEED----FDTVFIILDKMDKIGLDGVAEELEKE------------GYAKES 225

Query: 237 IDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           I+  ++      + E  +  L + ++G +  E   N L +I + V  +   S ++    T
Sbjct: 226 IEKYLTLFKGVEEAENGIKYLAKTLEGYLDPEVERNLLEII-DTVEGAKAASFKMVFDPT 284

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRG+ YYTG ++E             P +  + GGGGRYD +V +F GQ+VPA GFSIG
Sbjct: 285 LVRGMSYYTGTIFEI----------SMPELGAACGGGGRYDKMVGKFTGQDVPACGFSIG 334

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGS 413
             R+I+ L      T   +      +      ++ L +     Q  R AG +  +  +  
Sbjct: 335 FERIILLLMESG-FTVPTQRPKVAYLIEKGCPAEKLGEIIGKAQEERAAGKQVLVVRMNK 393

Query: 414 SKNFGN 419
           +K F  
Sbjct: 394 NKKFQK 399


>gi|323359435|ref|YP_004225831.1| histidyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323275806|dbj|BAJ75951.1| histidyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 424

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 127/432 (29%), Positives = 188/432 (43%), Gaps = 53/432 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            PRG  D    +   R R+L  IR  Y  +GFD IETP++E  D L   +  ++   K  
Sbjct: 6   PPRGMRDFLPADKARRERVLAVIRERYRAHGFDEIETPVMEDYDRLHAGIGGDN--EKLS 63

Query: 71  FSLQDDDGQ---------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF 115
           FS+                      + LRYDLT PLAR+ A N   +    R+ ++ PV+
Sbjct: 64  FSILKRGMDAEAIRAAADDPAALADLGLRYDLTVPLARFYATNRAQLPAVFRSIQMAPVW 123

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R E+   GR+RQF+QCD+D +G ++  A+AE+ +   D L+ +G++     +    R++L
Sbjct: 124 RAERPQKGRYRQFLQCDIDIIGDASARAEAELMIASLDVLDELGLEGGSIRVND--RRVL 181

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           D +L+  G   DD+      VL  IDKLDK G  GV   L +            A L   
Sbjct: 182 DAMLDVFGFVPDDR----PGVLITIDKLDKVGSSGVVAELRDRGAAAEAVDALAAYLDRP 237

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
                 SF    +  ++             ++    LV + E V  +      +     +
Sbjct: 238 AAPP--SFDDAGIRAALPA--------GIPDEVITHLVTLGETVAAARGADAPLVFDPFL 287

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRG+ YYTG ++E             P V  S+GGGGRYDG++ RF GQ VPA GFSIG 
Sbjct: 288 VRGMGYYTGTIFEL----------AHPSVDYSLGGGGRYDGMIGRFLGQQVPAVGFSIGF 337

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R++  L       +        ++   D D   L++       L   G R  +     K
Sbjct: 338 ERIVDLL------PDTDAAGDRSVVLVHDRDV-PLAQLLALKTHLVAGGARVRVE-QRPK 389

Query: 416 NFGNQLKY--AD 425
           N    L+   AD
Sbjct: 390 NMKALLERSAAD 401


>gi|317056775|ref|YP_004105242.1| histidyl-tRNA synthetase 2 [Ruminococcus albus 7]
 gi|315449044|gb|ADU22608.1| histidyl-tRNA synthetase 2 [Ruminococcus albus 7]
          Length = 399

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 80/447 (17%), Positives = 163/447 (36%), Gaps = 50/447 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +    P G  D   ++   R  +  ++  ++E +G+  + TP +E+ D+     
Sbjct: 1   MKRYDLI---TPEGTRDLLFEDCLARREVEKTLAALFEGFGYSEVVTPGIEFYDAF---S 54

Query: 61  PDEDRPNKG-VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
                  +  ++ L D  G+ I LR D T P+AR  A        P R Y    VF N  
Sbjct: 55  GSTRNFRQESLYKLTDSKGRLIVLRPDSTIPIARLAATRLKDADSPLRLYYNQSVFSNNA 114

Query: 120 HGPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
              GR  + +Q  ++ + G + + AD E+     + L +    + ++ + I +      +
Sbjct: 115 LLKGRSDEVVQAGIELIGGDNVKRADLEVLCTAVEALASFD--KENFRLEIGHIGYFKEL 172

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           + ++ +  D                    ++ ++LL+         D        +E   
Sbjct: 173 VAQLNVDED-------------------IIEEIRLLISSKNFPALNDLLDEIG-DNEITR 212

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +    S+     + +    +            L  +   +   GY   +I +   IV  
Sbjct: 213 ALKQLPSLFGGIEVLDKASDIYANDKITGILYNLRKVFNRLSSLGY-EGKISVDLGIVSH 271

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
            +YYTG V++  L     +          V  GGRYD L+  F  + +PA GF + +  +
Sbjct: 272 TDYYTGIVFKGYLSEVGQS----------VLKGGRYDNLIGSFG-KELPAVGFGVNVDSV 320

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + L+ + ++              +  +   + +   Y Q L   G + E  L +  ++ 
Sbjct: 321 ALHLERIGANPAGKPVDA-----VIFGEKGYVVEAMSYAQKLVREGCKLEHSLFN--SYE 373

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGML 445
             ++YA  +     I  G  E +   +
Sbjct: 374 ETVEYAKSKGIKKVITVGE-EITENNI 399


>gi|322384455|ref|ZP_08058137.1| ATP phosphoribosyltransferase regulatory subunit-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321150665|gb|EFX44140.1| ATP phosphoribosyltransferase regulatory subunit-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 408

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 162/409 (39%), Gaps = 48/409 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+  +L  G  D           +   +      +G++ I TP LE+ D++G   
Sbjct: 1   MAKP-KMFEKLI-GVKDYLPDAAAKLRHLEQQVTACMSRWGYNQILTPTLEFYDTVGAAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             EDR    +F L D +G  + LR D+TAP+AR V+        P R     P+FR  + 
Sbjct: 59  ATEDRK---LFKLLDRNGTTVVLRSDMTAPIARVVSSLLKDEPLPLRLSYHTPIFRAYEE 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              R  +F Q  V+ VG ++  ADAE+  + A +LE+VGI    + I + +   L+ + E
Sbjct: 116 KGARDAEFFQTGVELVGDASPDADAEIISLAASSLESVGISS--FTIALGHVGYLNCLFE 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +                         G + +K  L +       +      L+ E I  +
Sbjct: 174 ETLGDQKA------------------GQEELKQCLLDRNYVRYREQIHSFGLSEETITRL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            + L++  ++ + +      G+ A  +  +EL  I +++         + I  T+V    
Sbjct: 216 EAVLTLRGDREILQKARKTAGSSAAREAVDELEEIWDVLEAYEVTP-HVVIDLTMVMDFS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  +E                   V  GGRYD L+ +F  +  P+TGFS+  SR++ 
Sbjct: 275 YYTGMTFEGYAADLGF----------PVCSGGRYDHLMGQFG-RQAPSTGFSLKTSRILD 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR-TAGIRAE 408
            ++                   + +  ++  K   Y Q  R    I  E
Sbjct: 324 FVEE----------PSQPKRVLVLYTRENRKKALQYVQKRRMEEHIIVE 362


>gi|317130230|ref|YP_004096512.1| histidyl-tRNA synthetase 2 [Bacillus cellulosilyticus DSM 2522]
 gi|315475178|gb|ADU31781.1| histidyl-tRNA synthetase 2 [Bacillus cellulosilyticus DSM 2522]
          Length = 396

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 165/409 (40%), Gaps = 46/409 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D   +   ++ ++ D I      +G+ PIETP LE+ +++G   
Sbjct: 1   MSK--LFMFEKPVGMRDTLPELYELKRQVRDGIAKEVARWGYAPIETPTLEFYETIGSAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 ++ +F L D DG  + LR D+TAP+AR  A        P R     PVFR+++ 
Sbjct: 59  A---ILDQQLFKLLDQDGNTLVLRPDMTAPIARIAASTLKEAERPLRLTYDAPVFRSQQR 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G+  +F Q  V+ +G  + +AD E+  +M  +L+  G+   ++ + I +   L+  L 
Sbjct: 116 EGGKSAEFEQIGVELIGDVSNSADGEVISLMMASLKQAGL--ENFQVAIGHHGFLNSFLY 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++  +                      +   +  L E       +      L+S     +
Sbjct: 174 EVLGNDAR-------------------VDTFRRYLYEKNYVGFRNEVDQLTLSSIDKRRL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             +L +     + E  E +  +   +    +L  + E++      S++I I   +V  + 
Sbjct: 215 KEYLGLKGGPEVLEKAEALVESSEAKTALKQLYELIEVLEAYN-LSDKIIIDLNLVMHMS 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA                  +G GGRYD L+S+F     PATGF + + RL  
Sbjct: 274 YYTGTVFEAYSEGLGY----------PLGSGGRYDELLSKF-HDPEPATGFGLILDRLTE 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           AL   + S  N           + + ++   +    +  LR       M
Sbjct: 323 ALGKSKESIMND--------VCIIYSNERRKEAMEQSMKLRQEDRTVVM 363


>gi|331085056|ref|ZP_08334143.1| hypothetical protein HMPREF0987_00446 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330408756|gb|EGG88221.1| hypothetical protein HMPREF0987_00446 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 417

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 78/416 (18%), Positives = 147/416 (35%), Gaps = 41/416 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  + K+    P G  D   KE R +  + + +  +   YG++ I+TP  E+ +  G+  
Sbjct: 1   MAMRQKI-LHTPEGVKDIYGKECRKKLLLQEELHEMLHLYGYEDIQTPAFEFLEVFGRDT 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 ++ ++   D +G  ++LR D+T  +AR     F+    P R   IG  F N   
Sbjct: 60  G--IVSSRELYKFFDREGNTLALRPDITPSVARVAVTQFEKDSVPLRMCYIGNTFLNHGS 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q   + +G     ADAE+  + AD+L+  G+K     I + + + L  +L+
Sbjct: 118 QQGELCESTQLGAELIGDGTAGADAELIALAADSLKRAGMKEFQ--ISVGHVEFLQSLLD 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 + K                   + V+ ++         +  +   +     ++ 
Sbjct: 176 AAQFPAEVK-------------------EKVRTMIARRNFLGMRELLEKLPVKRPIREVF 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     +      +            L  + E+++   +    I     +     
Sbjct: 217 YRLPELVGSVEILNEARELAPDRRAILALERLKEVYEILKLY-HMQEMITFDLGMCGKYA 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+G ++          +         V  GGRYD L+ RF  + +PA GF+IG   L+ 
Sbjct: 276 YYSGIIF----------KSDTFGGGEPVAKGGRYDRLMERFG-RELPAAGFAIGTDELMK 324

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           AL   +       E        +  D +         +  R  G R E+     K 
Sbjct: 325 ALIRQKIQIPEEPEQ-----IILLFDREQRKYAISLAKEFRGKGKRVELLEREEKK 375


>gi|166031159|ref|ZP_02233988.1| hypothetical protein DORFOR_00845 [Dorea formicigenerans ATCC
           27755]
 gi|166029006|gb|EDR47763.1| hypothetical protein DORFOR_00845 [Dorea formicigenerans ATCC
           27755]
          Length = 423

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 111/429 (25%), Positives = 192/429 (44%), Gaps = 48/429 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ IR+ ++  I++ Y+ +GF  +ETP +E+ ++L      ++  
Sbjct: 5   LKKKPVTGMKDVMPAEMEIRDYLIGLIKDTYKTFGFQSMETPCVEHIENLCSKQGGDN-- 62

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PLARY + + + +  P +  +IG 
Sbjct: 63  EKLIFKILKRGEKLKIDEAKEENDLVDGGLRYDLTVPLARYYSNHANELPSPFKALQIGS 122

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G ++  A+ E+ +     L  +  K  ++ + IN+R 
Sbjct: 123 VWRADRPQKGRFRQFVQCDIDILGEASNLAEIELILATTAMLGKLDFK--NFTVCINDRN 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL  +    G   +D       V   +DK+DK G +GV+  L E               T
Sbjct: 181 ILKSMAAYSGFKEED----YDEVFIVLDKMDKIGPEGVEAELIEM------------GYT 224

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           SE +   +S           +  L E +   ++ E   + L +I   V  +     +++ 
Sbjct: 225 SESVKTYLSLFDEVASDVSGVRYLKEKLGDYLSDETA-DGLELIMSSVEAAKECDFKLQF 283

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           + T+VRG  YYTG ++E  +              GSV GGGRYD ++ +F GQ+ PA GF
Sbjct: 284 TPTLVRGQSYYTGTIFEVTMDDFG----------GSVAGGGRYDKMIGKFTGQDTPACGF 333

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EMF 410
           SIG  R+++ L                 +       +++ K     +  R AG +   + 
Sbjct: 334 SIGFERIVMLLLE-NGYKVPGGRQKKAYLLEKKLPKEAMLKVLALAKADREAGRQVLIVN 392

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 393 MKKNKKFQK 401


>gi|284048276|ref|YP_003398615.1| histidyl-tRNA synthetase 2 [Acidaminococcus fermentans DSM 20731]
 gi|283952497|gb|ADB47300.1| histidyl-tRNA synthetase 2 [Acidaminococcus fermentans DSM 20731]
          Length = 391

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 89/399 (22%), Positives = 157/399 (39%), Gaps = 42/399 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             +P G  D    + R++  + D +   + ++G+D   TP  EY+D+           ++
Sbjct: 7   LRIPYGTKDILPGDARLKRELEDRVAANFLSWGYDEAITPTFEYADTFALSGAG--ISDE 64

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +    D + + + LR ++T PLAR VA          R + I  VFR+E+   GR  +F
Sbjct: 65  SM-RFMDRNNRTLMLRSEMTTPLARMVATRLKNDKGVKRLFYIANVFRHEQTQAGRQCEF 123

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G+ A  ADAE+  +   +L+A G++  D+ I + +   L GI+E+ GL    
Sbjct: 124 SQAGIEMIGAEAPMADAEVLALAVSSLKAAGLQ--DFLISVGHSAFLAGIMEEAGLTEKQ 181

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
               + ++L                           +      +  +  D+    L +  
Sbjct: 182 ADFVKTMILS--------------------HNAVGLEEAAVRFIPKDLKDLFRDLLYLQG 221

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  E              L  I +L    G     +    +++R  +YYTG V+E
Sbjct: 222 GRDLLDDLEGRVKNQKSLDALKNLKAIYKLAEAYGVAQ-YLSFDLSLIRNFDYYTGMVFE 280

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A       N          + GGGRYD ++  F     PATGF++GI R+I++L+     
Sbjct: 281 AYAPQIGFN----------ICGGGRYDHMMEAFGDPE-PATGFALGIDRIILSLRRDGRF 329

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
               K    V          ++ K       LR  G   
Sbjct: 330 NRESKWDIYVAWAP-GCQEKAIQKAL----ELRNGGKNV 363


>gi|225568635|ref|ZP_03777660.1| hypothetical protein CLOHYLEM_04713 [Clostridium hylemonae DSM
           15053]
 gi|225162563|gb|EEG75182.1| hypothetical protein CLOHYLEM_04713 [Clostridium hylemonae DSM
           15053]
          Length = 423

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 114/433 (26%), Positives = 190/433 (43%), Gaps = 49/433 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   KE+ IR+ ++  I+  Y+ YGF  +ETP +E+ ++L      ++  
Sbjct: 5   LKKKPVTGMKDMLPKEMEIRDHVIWLIKETYKTYGFSSMETPCVEHIENLCSKQGGDN-- 62

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PLARY A + + +  P +  +IG 
Sbjct: 63  EKLIFKILKRGEKLKIEDAKEENDLVDGGLRYDLTVPLARYYANHANELPSPFKAMQIGN 122

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G  +  A+ E+ +     L  + +K  ++ + IN+R 
Sbjct: 123 VWRADRPQRGRFRQFMQCDIDILGEQSNLAEIELILATTAMLGKLNLK--NFTVCINDRN 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL  +    G   +D       V   +DK+DK G +GV   L E                
Sbjct: 181 ILKAMAAYSGFKEED----YDEVFIILDKMDKIGSEGVSAELQE------------LGYA 224

Query: 234 SEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E +D  +          + +  L E +   +  E   + + +I   V  +     ++K 
Sbjct: 225 KENVDTYLKLFDEISPGVEGIGYLREKLGAHLPAETA-DGMELIISSVEAAKEADFQMKF 283

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG  YYTG ++E                 GSV GGGRYD ++ RF GQ+ PA GF
Sbjct: 284 DPTLVRGQSYYTGTIFEVT----------MDEFGGSVAGGGRYDKMIGRFTGQDTPACGF 333

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-F 410
           SIG  R+++ L          K      +       + + +     +  R  G++  +  
Sbjct: 334 SIGFERIVMLLLE-NGYEVPGKGAKKAYLLEKKLSPEGMLRVLSLARADRENGLQVMIAN 392

Query: 411 LGSSKNFGN-QLK 422
           +  +K F   QL+
Sbjct: 393 MKKNKKFQKEQLE 405


>gi|326534006|dbj|BAJ93776.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 803

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 84/311 (27%), Positives = 143/311 (45%), Gaps = 30/311 (9%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            ++P+G  D   +++ IR R    I ++++ +G   ++TP+ E  ++L GK+  D    +
Sbjct: 452 PKIPKGTRDFGREQMAIRERAFSIITSVFKMHGGVALDTPVFELRETLMGKYGED----S 507

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K V+ L D  G+  SLRYDLT P ARYVA N    +   + Y+I  V+R +    GR+R+
Sbjct: 508 KLVYDLADQGGELCSLRYDLTVPFARYVAMNN---ISAIKRYQIAKVYRRDNPSKGRYRE 564

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F QCD D  G           + +   L    +    Y I +N+RK+LDG+LE  G+  +
Sbjct: 565 FYQCDFDIAGVYEPMEPDFEVVKVLTELLD-KLDIGVYEIKLNHRKLLDGMLEICGVPAE 623

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               +   V  +IDKLDK               +   +  +   +++E  + + S +   
Sbjct: 624 ----KFRTVCSSIDKLDKLT-----------FEEVKKELVEEKGVSNETAENIGSLVKTR 668

Query: 248 LEK-----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                    + +               NEL ++ + + K     +RI    ++ RGL+YY
Sbjct: 669 GPPLEVLLELRKEGSKFMENEGSVVALNELEILFKALEK-ANALDRISFDLSLARGLDYY 727

Query: 303 TGCVYEAILGF 313
           TG +YEA+   
Sbjct: 728 TGVIYEAVFKG 738


>gi|325661189|ref|ZP_08149816.1| hypothetical protein HMPREF0490_00549 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472696|gb|EGC75907.1| hypothetical protein HMPREF0490_00549 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 417

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 78/416 (18%), Positives = 147/416 (35%), Gaps = 41/416 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  + K+    P G  D   KE R +  + + +  +   YG++ I+TP  E+ +  G+  
Sbjct: 1   MAMRQKI-LHTPEGVKDIYGKECRKKLLLQEELHEMLHLYGYEDIQTPAFEFLEVFGRDT 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 ++ ++   D +G  ++LR D+T  +AR     F+    P R   IG  F N   
Sbjct: 60  G--IVSSRELYKFFDREGNTLALRPDITPSVARVAVTQFEKDSVPLRMCYIGNTFLNHGS 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q   + +G     ADAE+  + AD+L+  G+K     I + + + L  +L+
Sbjct: 118 QQGELCESTQLGAELIGDGTAGADAELIALAADSLKRAGMKEFQ--ISVGHVEFLQSLLD 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 + K                   + V+ ++         +  +   +     ++ 
Sbjct: 176 AAQFPAEVK-------------------EKVRTMIARRNFLGMRELLEKLPVKRPIREVF 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     +      +            L  + E+++   +    I     +     
Sbjct: 217 YRLPELVGSVEILNEARELAPDRRAILALERLKEVYEILKLY-HMQEMITFDLGMCGKYA 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+G ++          +         V  GGRYD L+ RF  + +PA GF+IG   L+ 
Sbjct: 276 YYSGMIF----------KSDTFGGGEPVAKGGRYDRLMERFG-RELPAAGFAIGTDELMK 324

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           AL   +       E        +  D +         +  R  G R E+     K 
Sbjct: 325 ALIRQKIQIPEEPEQ-----IILLFDREQRKYAISLAKDFRGKGKRVELLEREEKK 375


>gi|291458447|ref|ZP_06597837.1| histidine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418980|gb|EFE92699.1| histidine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 430

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 118/441 (26%), Positives = 190/441 (43%), Gaps = 51/441 (11%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLP 61
           K   L+ +   G  D    E+ +R  +L  IR  Y  +GF  IETP +E+ +  L +   
Sbjct: 10  KFMGLKKKPVTGMKDILPDEMAVRQYLLSEIRKCYREFGFTEIETPAVEHIENLLSRQGG 69

Query: 62  DEDRPNKGVFSLQDDDGQ--------------WISLRYDLTAPLARYVAENFDTIVFPCR 107
           D     K +F L     +                 LRYDLT PL R+ AEN   +  P +
Sbjct: 70  DN---EKLIFKLLKRGEKLEHALSSGEASALSDSGLRYDLTLPLTRFYAENQAKLPNPFK 126

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK-RNDYH 166
             +IGPVFR ++   GRFR+F+QCD+D +G  +  ++ E+ + +   L  +G   R+ + 
Sbjct: 127 ALQIGPVFRADRPQKGRFREFVQCDIDILGDESNLSEIELILAIGSFLRRIGFSERHPFR 186

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I +N+R+IL G+    G   +D       +   +DK DK G +GV+  L           
Sbjct: 187 IVLNDREILRGMQRFAGFPEED----FEEICVILDKADKIGTEGVREELL---------- 232

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELY--ELVKGTIAGEKGFNELVVISELVRKSGY 284
                L++E ID  +S +    E++       E++   ++  +    L  I E+VR+   
Sbjct: 233 --SLGLSAEGIDRYLSLVLNAGEEAEDIRRLGEILGEKLSP-EISENLSEIMEMVREIAG 289

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
              R+    T+VRG+ YYTG ++E        +               RYD +V  F G+
Sbjct: 290 PELRLSFDPTLVRGMGYYTGPIFEIRAEGFPGSIGGGG----------RYDRMVGLFTGK 339

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           +  A GFSIG  RL+  L    +     +E    ++       + LS         R  G
Sbjct: 340 DTAAVGFSIGFERLVTILL-ESNEETEREEGSLAILLEKGISREKLSAALREADRRRKRG 398

Query: 405 IRAEMF-LGSSKNFGN-QLKY 423
            R  +  +  +K F   QL+ 
Sbjct: 399 ERVLIVRMNKNKKFQKEQLRK 419


>gi|302670810|ref|YP_003830770.1| ATP phosphoribosyltransferase regulatory subunit HisZ [Butyrivibrio
           proteoclasticus B316]
 gi|302395283|gb|ADL34188.1| ATP phosphoribosyltransferase regulatory subunit HisZ [Butyrivibrio
           proteoclasticus B316]
          Length = 369

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 80/409 (19%), Positives = 152/409 (37%), Gaps = 43/409 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +    P G  D   KE   R  I++ I +  E++G+  IETP  E+ D   + +
Sbjct: 1   MSK---ILLHTPDGVRDIYGKECSDRKYIINKIHDKMESFGYSSIETPTFEFFDVFAEEI 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   K ++   D +G  + LR D T  +AR  ++       P R    G  F N  +
Sbjct: 58  NASD--TKELYKFFDKEGNTLVLRPDFTPSIARCASKVMLENGNPVRVCYEGNSFLNVSN 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G+ ++     V+ +  S+  ADAE   ++ ++L++ G++  D+ + + +     G+  
Sbjct: 116 LQGKLKENCNIGVELMNDSSVYADAETIALLIESLKSSGLQ--DFQVSVGDADYYKGLCA 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           + G+  + +                   + ++  +       +    +  N+  +  +++
Sbjct: 174 EAGITPETE-------------------EEIREQIIGKNYFAAEAIMREKNIPDKYSELI 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           V            E                 L  + +++   G     I     I+    
Sbjct: 215 VKVSEFIGSDDALEKAASQVQNERSLAAIKRLKDLYKVLTYYGV-EKYISFDLGILSRFN 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++ A              V  ++  GGRYD L+ ++   + PA GFSI +  L+ 
Sbjct: 274 YYTGVIFSAYT----------YGVGDAIAKGGRYDNLLGKYG-TDAPAIGFSIIVDDLMS 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           AL        N  E     I T+ +  ++          LR  G    +
Sbjct: 323 ALYRQGIKVENNTE-----IETITYTQETFESALNKANALRNQGRNVVL 366


>gi|167758799|ref|ZP_02430926.1| hypothetical protein CLOSCI_01141 [Clostridium scindens ATCC 35704]
 gi|167663539|gb|EDS07669.1| hypothetical protein CLOSCI_01141 [Clostridium scindens ATCC 35704]
          Length = 423

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 113/432 (26%), Positives = 186/432 (43%), Gaps = 47/432 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   KE+ IR+ ++  I+  Y+ YGF  +ETP +E+ ++L      ++  
Sbjct: 5   LKKKPVTGMKDMLPKEMEIRDYVIHLIKETYKTYGFSSMETPCVEHIENLCSKQGGDN-- 62

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PLARY A +   +  P +  +IG 
Sbjct: 63  EKLIFKILKRGEKLKIDEAKEENDLVDGGLRYDLTVPLARYYANHMSELPSPFKAMQIGN 122

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+ +     L  +  +  ++ + IN+R 
Sbjct: 123 VWRADRPQKGRFRQFMQCDIDILGEPGILAEIELILATTAMLGKLNFQ--NFTVCINDRN 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL  +    G   +D       V   +DK+DK G +GV   L E                
Sbjct: 181 ILKAMAAYSGFKEED----YDEVFIVLDKMDKIGKEGVAGELQE------------LGYG 224

Query: 234 SEQIDI-MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
            E +D  +  F  +  +       +   G     +    +  I   V ++      I+  
Sbjct: 225 KESVDTYLGLFDEVTPDVEGIRYLKEKLGCCLSSETAEGMETIISSVEEAKEAKFGIRFD 284

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            T+VRG  YYTG ++E  +              GSV GGGRYD ++ +F GQ+ PA GFS
Sbjct: 285 PTLVRGQSYYTGTIFEVTMDDFG----------GSVAGGGRYDKMIGKFTGQDTPACGFS 334

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EMFL 411
           IG  R+++ L          K      +   +   + + K     +  R AG +   + +
Sbjct: 335 IGFERIVMLLLE-NGYEVPRKGAKKAYLLEKNMPKEGMLKVLAMAKTDREAGKQVLIVNM 393

Query: 412 GSSKNFGN-QLK 422
             +K F   QL+
Sbjct: 394 KKNKKFQKEQLQ 405


>gi|255525595|ref|ZP_05392529.1| histidyl-tRNA synthetase 2 [Clostridium carboxidivorans P7]
 gi|296185482|ref|ZP_06853892.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           carboxidivorans P7]
 gi|255510685|gb|EET86991.1| histidyl-tRNA synthetase 2 [Clostridium carboxidivorans P7]
 gi|296050316|gb|EFG89740.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           carboxidivorans P7]
          Length = 391

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 83/424 (19%), Positives = 164/424 (38%), Gaps = 40/424 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G  D   +E   +  I + +R  Y   GF  +++P LE+ D             + +
Sbjct: 8   IPEGTKDTLFEECTRKVEIENILRKTYTCSGFLEVKSPTLEFYDVF--SGESSTLAQEKM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D+ G+ + LR D+T P+AR  A     +  P R      V+R  +   G+  +  Q
Sbjct: 66  YKLFDNHGRILVLRPDMTTPIARIAATKLKEVTHPLRLCYTSNVYRVNESLNGKNSEITQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G  +  ADAE  +     L   G+   D+ + + + +    I+E + +  ++K 
Sbjct: 126 SGIEIIGVKSLKADAEAIITGITALINCGV--EDFKVELGHAEFFKAIIEDVNIDDEEKE 183

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
             R+ +           L   +  + +                 + + I+     +    
Sbjct: 184 KLRVYIENKNFTALSEFLDKNRNSMNK-----------------DTLKILKELPKLFGNM 226

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + ++           +  N++  + E+++ +G   + + +   +V  L YYTG ++   
Sbjct: 227 DILDVVCTFTDNEKALEAINDIKAVYEIIKDAGLG-DYVSVDLGMVHYLNYYTGIIFRGY 285

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                        V G++  GGRYD L+ +F  Q   ATGF++ +  +I AL++      
Sbjct: 286 AE----------GVGGNILSGGRYDNLIKQFGEQQE-ATGFAVNVDSIISALENCGQINE 334

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
           +  +   +     D       K       LR  G  AE+ L  S+      +YA  +   
Sbjct: 335 SKVKKILIYYKNAD-----FKKAYDKALKLREDGSIAELSLFDSQ--KEAEEYAQEKGME 387

Query: 431 LAII 434
             II
Sbjct: 388 FIII 391


>gi|291544893|emb|CBL18002.1| ATP phosphoribosyltransferase, regulatory subunit [Ruminococcus sp.
           18P13]
          Length = 410

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 75/436 (17%), Positives = 153/436 (35%), Gaps = 45/436 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E   R  +   I  I+ + GF  + TP+LE+ D           P + +
Sbjct: 19  TPEGTKDYLFTECAQRRSVEHRIEQIFRSRGFSEVITPVLEFFDVFSHKSA--YFPQEQM 76

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D  G+ + +R D T P+AR VA        P R Y    V+ N     GR  Q  Q
Sbjct: 77  YKFADSKGRLLVIRPDSTMPIARVVATRLKDAPLPLRLYYNQCVYANTPQLKGRSDQVAQ 136

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +GS ++ AD E+     + LEA     + + + + +  +   ++ ++    + + 
Sbjct: 137 TGIELIGSDSKLADLEVISTALEVLEACAY--DTFSLELGDIAVFKELMNQLHTDEETQ- 193

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                             + ++ L+         D       +     + +       E+
Sbjct: 194 ------------------EQIRSLIEFKNYPALNDLLDTIGDSETVRAVKMLPRLFGGEE 235

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              +     KG         ++  I + +R    ++ R+  +  +   L       Y   
Sbjct: 236 VFEKAARYFKG--------EKMQAILDNLRSVYEDAVRLCENGKVTIDLGMVNRTDYYT- 286

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
               ++ +         V  GGRYD L++ F   +VPATGF++ +  +            
Sbjct: 287 ---GIIIKGYLSGYGDEVLSGGRYDKLIAEFGY-DVPATGFAVHVDAISQV------YAK 336

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
           +  ++       +       ++     + LR  G+  E+ +  +    +   YA +R   
Sbjct: 337 HDPQVPVHSDVLIFAGEGCAAQAICRAKKLRAEGLIVELAMQDT--VEDARAYARQRGIA 394

Query: 431 LAIIQGTGERSRGMLQ 446
             +I    E +  ++ 
Sbjct: 395 KLVII-NDEAATEIIS 409


>gi|160880918|ref|YP_001559886.1| histidine--tRNA ligase [Clostridium phytofermentans ISDg]
 gi|160429584|gb|ABX43147.1| Histidine--tRNA ligase [Clostridium phytofermentans ISDg]
          Length = 418

 Score =  143 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 89/452 (19%), Positives = 159/452 (35%), Gaps = 50/452 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E   +  +   +      +GF  I+TP+ E+ D   K         K +
Sbjct: 7   TPEGVRDIYNSEFAKKKMLEQELSKRLALHGFHEIQTPMFEFFDIFSK--ERGSVSGKEM 64

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D +G  + LR D+T  +AR VA+ + T   P R    G  F N     G+ ++  Q
Sbjct: 65  YKFFDREGNTLVLRPDITPSIARCVAKYYKTEEMPIRLSYCGSTFINSSSYQGKLKETTQ 124

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              + +  ++  ADAEM  +  + L+  G+K     I         GI+E+ G   D+  
Sbjct: 125 LGAELINDASIEADAEMIALTVECLKCAGLKEFQVEI--GQADFFLGIVEEAGFDEDE-- 180

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                             + +++L+         +   G  L      +++    +    
Sbjct: 181 -----------------TEQLRILIENKNLFGVEELISGKKLEKPVKSVILQLTDLFGTL 223

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                 +              +  + EL+   GY    I     ++    YYTG ++ A 
Sbjct: 224 DKVLGVKESIHNERARNALERMEKLYELLTLYGYEQ-YITFDLGMLSKYNYYTGIIFRAY 282

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                           +V  GGRYD LVS+F  +  PA G ++ I +L+ AL   +    
Sbjct: 283 T----------YGTGDAVITGGRYDSLVSQFG-KQAPAIGMAVLIDQLLTALSRQKLLGE 331

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-FLGSSKNFGNQLKYADRRNC 429
              E        + +DS  ++         R   ++ EM      K   + + YA+R + 
Sbjct: 332 PELENT-----LIVYDSSYIANAVALANHFRGQEMKIEMLAHDERKTREDYIAYANRMSI 386

Query: 430 -PLAIIQGTGERS-----RGMLQ---IKDLAK 452
             +  +    E        G +Q   +K +  
Sbjct: 387 GGILALFTEDEVEVIHAIDGTVQTVPLKGMLS 418


>gi|167758129|ref|ZP_02430256.1| hypothetical protein CLOSCI_00467 [Clostridium scindens ATCC 35704]
 gi|167664026|gb|EDS08156.1| hypothetical protein CLOSCI_00467 [Clostridium scindens ATCC 35704]
          Length = 417

 Score =  143 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 86/473 (18%), Positives = 159/473 (33%), Gaps = 67/473 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K        P G  D    E   +  +   I+ ++  YG+  I+TP  EY D   K +
Sbjct: 1   MKK----LLHTPEGVRDIYNVECGKKLALEGRIKKVFHLYGYHDIQTPTFEYFDVFRKEI 56

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                P+  ++   D DG  ++LR D+T  +AR  A  F     P R    G  F N  +
Sbjct: 57  G--TVPSNELYKFFDKDGNTLALRPDITPSIARAAATLFQDEELPIRLCYTGSTFVNHSN 114

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR R+  Q   + +G  +  ADAEM  ++ +++  +G+K     + + N      ++E
Sbjct: 115 YQGRLRETTQMGAELMGDDSVEADAEMLALVIESMLTIGLKEFQ--LSVGNVDFFQSLIE 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              L  + +L                    V+ L+         +F     +     +  
Sbjct: 173 DACLDEEAELR-------------------VRELINNRNYFGVEEFLNSIQVKRSSKEAF 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +   +     +    + +     G      L  I + ++  G     +    ++     
Sbjct: 214 SALNELVGGIDILAQAKNIAPNSKGVMAVKRLEKIYDTLKLYGV-EKFVTFDLSMSGTYG 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++                   ++  GGRYD L+ +F  +   + GF I I  L+ 
Sbjct: 273 YYTGIIFRGYTF----------GTGDAIVKGGRYDHLLEKFG-KEFASIGFVIVIDELMN 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL   +      ++   +L      D     +     +  R      E+     K+ G  
Sbjct: 322 ALIRQKVRIVYTRKNTLILY-----DEGKQREAIALAKDFRRKAKNTELI---KKSKGKL 373

Query: 421 LK---------YA-DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           L+         YA +                 G + + +L  G+       + 
Sbjct: 374 LEEYVEYGKEYYAGNLIYIK----------KSGEITMINLVTGEHKIVNSTDR 416


>gi|315651810|ref|ZP_07904814.1| histidine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485940|gb|EFU76318.1| histidine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 419

 Score =  143 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 180/421 (42%), Gaps = 46/421 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D   +E+ IR+ +++ I+  Y ++GF  IETP +E+ ++L      ++   K +F +
Sbjct: 10  GMKDILPEEMFIRDYLINIIKKTYGSFGFTSIETPAVEHIENLLSKQGGDN--EKLIFKI 67

Query: 74  QDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                +                LRYDLT PLARY + N   +  P +  +IG V+R ++ 
Sbjct: 68  LKRGEKLKLENIKDENDLVDAGLRYDLTLPLARYYSNNQANLPSPFKALQIGNVYRADRP 127

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFRQF QCD+D +G ++  A+ E+ +     L  +   ++      + R     IL 
Sbjct: 128 QKGRFRQFTQCDIDILGEASNLAEIELILATTKALGEIANGKHFKVRINDRR-----ILM 182

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE-GRTDNSGDFTKGANLTSEQIDI 239
            + L      +    V   +DK+DK G  GVK  L E    +    +    N  S+    
Sbjct: 183 AMALFAGYNEDNINDVFIILDKMDKIGSDGVKKELTELDGVEKCVKYLSLFNGLSDNAKA 242

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++S              + + G I  +   + L  I + V +   N   +    T+VRG+
Sbjct: 243 VLSL------------KDKLAGFIE-DGVLDSLCEIIDTVLEVKTNEFSLVFDPTLVRGM 289

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            YYTG ++E                 GSV GGGRYD ++ +F G ++PA GFSIG  R+I
Sbjct: 290 GYYTGTIFEV----------SMEGFSGSVAGGGRYDKMIGKFTGNDIPACGFSIGFERII 339

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGSSKNFG 418
             L   E      +      +   + D + L         LR AG    +  +  +K F 
Sbjct: 340 AILLD-EGFKIPDESRKIAFLYEKNIDGNVLKDILKEAASLREAGNIVLVSKMNKNKKFQ 398

Query: 419 N 419
            
Sbjct: 399 K 399


>gi|197303675|ref|ZP_03168712.1| hypothetical protein RUMLAC_02402 [Ruminococcus lactaris ATCC
           29176]
 gi|197297195|gb|EDY31758.1| hypothetical protein RUMLAC_02402 [Ruminococcus lactaris ATCC
           29176]
          Length = 423

 Score =  143 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 111/429 (25%), Positives = 185/429 (43%), Gaps = 48/429 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ IR+ ++  I+  Y  +GF  IETP +E+ ++L      ++  
Sbjct: 5   LKRKPVTGMKDILPGEMEIRDYVISLIKETYRTFGFSSIETPCVEHIENLCSKQGGDN-- 62

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY A + + +  P +  ++G 
Sbjct: 63  EKLIFKILKRGEKLKLAEAKEEADLVDGGLRYDLTVPLSRYYANHSNELPAPFKALQMGN 122

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G  +  A+ E+ +     L  +  K  ++ I IN+R+
Sbjct: 123 VWRADRPQRGRFRQFMQCDIDILGEPSNLAEIELILATTALLGKLDFK--NFTIRINDRR 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L  +    G   +D       V   +DK+DK GL+GV   L E                
Sbjct: 181 FLKAMAAYSGFAEED----YDNVFITLDKMDKIGLEGVAAELKEN------------GYA 224

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E ++  +            +    E +KG +  E   + L  I   V  +     R+  
Sbjct: 225 EESVEKYLQLFKEITNDVAGVRSCKERLKGFLPAEAA-DSLERIITSVESAKEAEFRMFF 283

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQ+ PA GF
Sbjct: 284 DPTLVRGMSYYTGTIFEI----------SMDEFGGSVGGGGRYDKMIGKFTGQDTPAVGF 333

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-F 410
           SIG  R+++ L           +     +   +   + + K     +  R  G +  +  
Sbjct: 334 SIGFERIVMLLMERG-YKVPTSKEKKAFLIEKNMPQEGMLKVLALAKKERENGRQVMIVN 392

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 393 MKKNKKFQK 401


>gi|153854669|ref|ZP_01995919.1| hypothetical protein DORLON_01917 [Dorea longicatena DSM 13814]
 gi|149752773|gb|EDM62704.1| hypothetical protein DORLON_01917 [Dorea longicatena DSM 13814]
          Length = 423

 Score =  143 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 113/427 (26%), Positives = 184/427 (43%), Gaps = 44/427 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   +E+ IR+ ++  I+  Y+ YGF  IETP +E+ ++L      ++  
Sbjct: 5   LKKKPVTGMKDMLPREMEIRDYLIGLIKETYKTYGFCSIETPCVEHIENLCSKQGGDN-- 62

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PLARY A + + +  P +  +IG 
Sbjct: 63  EKLIFKILKRGEKLKIDTAKEENDLVDGGLRYDLTVPLARYYANHSNELPAPFKALQIGN 122

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+ +     L  +  +  ++ + IN+R 
Sbjct: 123 VWRADRPQKGRFRQFMQCDIDILGEPGNLAEIELILATTAMLGKLSFQ--NFTVCINDRN 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL  +    G   DD       V   +DK+DK G +GV   L E         T      
Sbjct: 181 ILKAMAAYSGFREDD----YDEVFIILDKMDKIGAEGVAKELEEMGYLKENVETY----- 231

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                 +  F  +  + +     +   G    E+  + + +I   V  +      IK   
Sbjct: 232 ------LQLFKDVAPDVTGIRFLKEKLGDCLSEETADSMEMIISSVETAKECEFNIKFDP 285

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           T+VRG  YYTG ++E  +              GSV GGGRYD ++ +F GQ+ PA GFSI
Sbjct: 286 TLVRGQSYYTGTIFEVTMDDFG----------GSVAGGGRYDKMIGKFTGQDTPACGFSI 335

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EMFLG 412
           G  R+++ L           +     +       + L K     +  R AG +   + + 
Sbjct: 336 GFERIVMLLLE-NGYEVPTIKEKKAYLLEKKMTKEGLLKVMSLAKADRQAGKQVLIVNMK 394

Query: 413 SSKNFGN 419
            +K F  
Sbjct: 395 KNKKFQK 401


>gi|331002007|ref|ZP_08325527.1| hypothetical protein HMPREF0491_00389 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411803|gb|EGG91208.1| hypothetical protein HMPREF0491_00389 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 419

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 111/432 (25%), Positives = 180/432 (41%), Gaps = 53/432 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D   +E+ IR+ +++ I+  Y ++GF  IETP +E+ ++L      ++   K +F +
Sbjct: 10  GMKDILPEEMFIRDYLINIIKKTYGSFGFTSIETPAMEHIENLLSKQGGDN--EKLIFKI 67

Query: 74  QDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                +                LRYDLT PLARY A N   +  P +  +IG V+R ++ 
Sbjct: 68  LKRGEKLQLEDINDENDLVDAGLRYDLTLPLARYYANNQANLPNPFKALQIGNVYRADRP 127

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GRFRQF QCD+D +G ++  A+ E+ +     L  +      + + IN+R++L  +  
Sbjct: 128 QKGRFRQFTQCDIDILGEASNLAEIELILATTKALSQI-AHGKKFTVRINDRRVLMAMAL 186

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             G   D        V   +DK+DK GL GV+  L E   +   +              +
Sbjct: 187 YAGYSQD----NIGNVFIILDKMDKIGLAGVRKELNELDGEEKCEKYLS----------L 232

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L+ + +  +     L      G    + L  I   V     N   ++   T+VRG+ 
Sbjct: 233 FDGLTNNSKALISLKDSLSGFIEDG--VLDGLSEIMNTVLDVKSNDFSLEFDPTLVRGMG 290

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++E                 GSV GGGRYD ++ +F G +  A GFSIG  R+I 
Sbjct: 291 YYTGTIFEV----------SMEGFPGSVAGGGRYDKMIGKFTGNDTAACGFSIGFERIIT 340

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGSSKNFGN 419
            L          +      +   + D+  L+        LR +G    +  +  +K F  
Sbjct: 341 ILMDAG-FKIPDESKKIAFLYEKNIDAAVLTNILKEAAALRESGNIVLVSKMNKNKKFQK 399

Query: 420 ---------QLK 422
                    Q K
Sbjct: 400 EGLEKQGYTQFK 411


>gi|126658937|ref|ZP_01730079.1| histidyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126619735|gb|EAZ90462.1| histidyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 405

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 84/435 (19%), Positives = 165/435 (37%), Gaps = 48/435 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I D+++ ++  +G+  I T  +E  D+L      ED  
Sbjct: 1   MIHQPPAGARDLLPLEVVQKAWINDTLQQVFGQWGYQRIVTSTIERLDTLKAGGAIEDNT 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG-RF 125
              +++   +  + + LR +LTA +AR          +P R      VFRN   G   R 
Sbjct: 61  VIQLYN---NSSEQLGLRPELTASVARAAVTRMTDTSYPQRLCYRANVFRNPPSGHHGRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  V+ + S    ADAE+ +++A+ L+ +  +  ++++ + +  +   +L      
Sbjct: 118 LEFYQAGVELLFSGGTLADAEILLLVANCLQKL--QIPNWYLILGDAGLTRSLLSPFPDG 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++   L  L  ++                                      ++ F  
Sbjct: 176 LRQEVRHCLATLDFVELDSLSYPDEELKH-----------------------RAILLFNL 212

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + +     ++     G+   N L  + EL+  S      + +  ++++  +YYTG 
Sbjct: 213 RGKPEDVLSKVGVLSLDETGKHCLNNLKSLIELINHSASYKLPLTLDLSLIQTFDYYTGI 272

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
           +++AI         Q      ++G GGRYD L  V   + ++ P  GFS+ +  L   L 
Sbjct: 273 IFKAI--------GQTNNQLQNLGQGGRYDQLLGVYHPQKKSAPGIGFSLNVGALHRCLL 324

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGSSKN--FGNQ 420
           S +      K+   +    +    +S ++   Y Q LR    +R  + LG   N    N 
Sbjct: 325 STDVLP---KKPPLIDYLVVAKSPESQTEAFKYAQKLRDNNSVRVTLDLGDRNNEEIKN- 380

Query: 421 LKYADRRNCPLAIIQ 435
             YA        +  
Sbjct: 381 --YAQENGIKTIVWI 393


>gi|119511225|ref|ZP_01630341.1| ATP phosphoribosyltransferase regulatory subunit [Nodularia
           spumigena CCY9414]
 gi|119464103|gb|EAW45024.1| ATP phosphoribosyltransferase regulatory subunit [Nodularia
           spumigena CCY9414]
          Length = 403

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 92/446 (20%), Positives = 179/446 (40%), Gaps = 49/446 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D    ++  +  I D ++ ++  +G+  I T  LE  D+L      E   
Sbjct: 1   MVYQPAAGARDLLPLDVAQKRWIEDRLQQVFHRWGYHRIITSTLERMDTLMAG---EAIQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE-KHGPGRF 125
            + V  LQ+ + + + LR +LTA +AR VA     + +P R Y    VFR   ++   R 
Sbjct: 58  RQMVIQLQNGEDEELGLRPELTASIARAVATRMADVTYPQRLYYNANVFRRTWENRHNRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           ++F Q  V+ +G     A+AE+ ++  + L A+G+   D+H+ +    I   +L+   ++
Sbjct: 118 QEFYQSGVELLGVGGLLANAEVLLLARNCLTALGL--PDWHLILGEAGITRSLLDAFPVN 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++   +  L  I          ++        D +         +++ +  + S   
Sbjct: 176 IQAQVRSAIAHLDRIAIDTLPLSDELR--------DRARIMMDLRGDSADVLQKVSS--- 224

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                        +      ++  N L  + EL++  G     + +  ++++ ++YYTG 
Sbjct: 225 -------------LGLAPEQQEIVNHLKSVVELLQSEGEFP--LILDLSLIQTIDYYTGI 269

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
           V+E +                 +G GGRYD L  +   +G+++P  GF + I  L   L 
Sbjct: 270 VFEIV--------SDTGSQARVLGRGGRYDKLLGLYHPQGEDIPGIGFVLNIEDLYQVLL 321

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGNQL 421
           S +    +           +    +  +    + Q LR +   +R EM LG   +     
Sbjct: 322 STQQLPQSTPASDW---LVVAQTPNVEAAAFAHAQKLRDSTDLVRVEMDLG-GTDVEAMR 377

Query: 422 KYADRRNC-PLAIIQGTGERSRGMLQ 446
           KYA  R    +A I+  GE     L+
Sbjct: 378 KYASDRGITQIAWIKSDGEIVNESLR 403


>gi|7378622|emb|CAB83298.1| histidyl-tRNA synthetase-like protein [Arabidopsis thaliana]
          Length = 333

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 94/197 (47%), Gaps = 2/197 (1%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
             +    P+G  D P +++R+RN + +  + +   +G++ ++ P+LE      +   +E 
Sbjct: 65  QNIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLFGYEEVDFPVLETEALFIRKAGEEI 124

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           R    ++  +D   + ++LR +LT  LAR V +   ++  P + + +G  +R E+   GR
Sbjct: 125 RD--QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGR 182

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q ++D +G    TA+AE+   +    + +GI  +D    +++RK     L    L
Sbjct: 183 RREHYQWNMDIIGVPEVTAEAELISSIMTFFKRIGITASDVGFKVSSRKQSKHQLTAALL 242

Query: 185 HGDDKLNERLIVLRAID 201
               +  E ++     D
Sbjct: 243 PELGQEVENIVCALDKD 259



 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 18/60 (30%), Gaps = 1/60 (1%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V       D D           L+  G   ++ L  SK      K A R N    ++ G 
Sbjct: 249 VENIVCALDKDLQGAATTIATALKDKGQTVDLVL-ESKPLKWVFKRAARVNARRPVLVGK 307


>gi|156742866|ref|YP_001432995.1| histidyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156234194|gb|ABU58977.1| histidyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 484

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 108/511 (21%), Positives = 189/511 (36%), Gaps = 80/511 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             +  RG  D    E   +     +I  +   +G++P++ P++EY D   + L +E    
Sbjct: 4   NIDTVRGMRDVLPSEAAAQTAAAAAIERVLAAWGYEPVDLPIIEYRDLYLRKLGEELVGK 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              F+    +G+ ++LR + TA + R           P R    GPVFRNE+     +RQ
Sbjct: 64  VYEFNF---NGRDLALRPEWTASVLRAYVGRMQDQPLPLRLRYAGPVFRNERPQRATYRQ 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+ +G +A  ADAE   +  + L A G+    + + I +  ++  +L  +GL   
Sbjct: 121 FTQVGVELIGGAAPRADAECLALACEGLAAAGVT--HFTVRIGHIGLIRSLLAALGLSER 178

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLL-------------LGEGRTDNSGDFTKGANLTS 234
            +      + R    L + G   V+               L +G  D   +      L  
Sbjct: 179 AQGRLAWRLER----LREHGAAAVRAEFDAPATALPLDPALLDGIDDQRAEALLLHALRE 234

Query: 235 -----------------------------EQIDIMVSFLSI------DLEKSMHELYELV 259
                                        +QID  +  L        D  ++     E++
Sbjct: 235 IGVNLRFGTRPPEAIVGRLVRKLRRSESRDQIDRALQMLERLCRVEGDPNEAFGAAEEML 294

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
           +       G +EL  I  L    G   +R+++   + RGL YYTG ++E           
Sbjct: 295 RDY--AVTGLDELRAILRLAAAHGVALDRVRLDFGLGRGLHYYTGMIFEIYA-------- 344

Query: 320 QKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV 378
                   + GGGRYD LVS     Q  PA GF+ G       L+ + +  + +      
Sbjct: 345 ---GDGLQLCGGGRYDDLVSALGGRQPTPAVGFAYG-------LERVVAVASPVAAPSRP 394

Query: 379 LI-TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
            +   +  D D         ++LR  G  A   +   +     L+ A RR     ++ G 
Sbjct: 395 PVALVVATDDDVYPYALEVARLLRLRGHTAMTDVRM-RGISGNLRDAARRGVRFVVVVGA 453

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWRE 468
            E ++  +  +DL + +E    + +    +E
Sbjct: 454 DECAQRCVVWRDLERHEEYRIALGDIPQAKE 484


>gi|149181832|ref|ZP_01860322.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus sp.
           SG-1]
 gi|148850471|gb|EDL64631.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus sp.
           SG-1]
          Length = 394

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 85/409 (20%), Positives = 157/409 (38%), Gaps = 47/409 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D      + +  +   +    + +G+  IETP LEY ++     
Sbjct: 1   MSK--LFMFEKPLGMRDTFPSLYQAKASLKTKMDETIKAWGYQFIETPTLEYFET---VG 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 ++ +F L D  G  + LR D+TAP+AR  A        P R      VFR ++ 
Sbjct: 56  EASAILDRQLFKLLDQQGHTLVLRPDMTAPIARVAASKLLRNKQPLRLAYCANVFRAQQR 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  ++ +G    +AD E+  +M  + +A G++  ++ I I +   +  + +
Sbjct: 116 EGGRPAEFEQFGIECIGDETISADGEVISLMISSFKAAGLQ--NFTISIGHIGFVRELFK 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I    +                       +   L E       D      L+S     +
Sbjct: 174 EILGTEERA-------------------NTLSRFLYEKNYVGFRDHVNDLPLSSIDKQRL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            SFL +   K   +    +    AG +   +L  +S+L+   G     +K   ++V  + 
Sbjct: 215 FSFLKLRGGKDKLQEAYPLMEGEAGREAIGQLEELSDLLEDYGLAQ-YVKFDLSLVSHMS 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+G ++E   G               +G GGRY+ L+ +F       +G +    R+  
Sbjct: 274 YYSGILFETYAGNVGF----------PIGNGGRYNKLMEKFGKD----SGATGFALRIDH 319

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
            L++L  + N + +        +    +  S+   + Q LR +G    +
Sbjct: 320 ILEALGFAENPVTDHC------VLFSRERRSEAIQFAQDLRQSGKSVVL 362


>gi|332798655|ref|YP_004460154.1| ATP phosphoribosyltransferase regulatory subunit [Tepidanaerobacter
           sp. Re1]
 gi|332696390|gb|AEE90847.1| ATP phosphoribosyltransferase regulatory subunit [Tepidanaerobacter
           sp. Re1]
          Length = 371

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 92/416 (22%), Positives = 169/416 (40%), Gaps = 48/416 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K        P G  D    + R + RI     +I E +G++ +  P  EY ++  K  
Sbjct: 1   MTKY----FRKPAGVKDYLPPQARKKRRIEKISSDILEKWGYEEVIAPSFEYLETFVKSG 56

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + VF   D  G  ++LR D+T  +AR VA ++     P R Y +  VFR ++ 
Sbjct: 57  QPG--FAEKVFKFFDRQGGVMALRPDITTSIARMVATHYSEHSMPLRFYYMANVFRFQEM 114

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR ++F Q   + +G S   AD E+ ++ +  LE +G   +++ I + + K L+G+L+
Sbjct: 115 RKGREQEFYQTGAELIGISGIEADIEIIILASFILEEIG--IDNFIINVGHIKFLEGLLD 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I    DD L +  I     +K        ++  + +  T              E +D +
Sbjct: 173 EI---EDDPLLKDDIAQAIKNKNFVLLKNLIEANVLKSNTKEIFSALPYFYGGPEILDEI 229

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + F   D                   +  ++L  + ++++   +++  +     + RG++
Sbjct: 230 IKFPLND----------------KCVEAISDLAKLWKVLK--NFDNINLTFDPGLARGMD 271

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E             P     +GGGGRYD L+ +F   + PATGF++    ++ 
Sbjct: 272 YYTGIVFEIY----------SPNAGFPLGGGGRYDTLLDKFN-GSRPATGFALSEDVILS 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
            L                  T + ++     +     + +R  GI  +M      N
Sbjct: 321 VLDK--------DMKDIYEPTYLFYNPKRFVEALDKAEEMRKHGIIVKMIPSEKHN 368


>gi|218672724|ref|ZP_03522393.1| histidyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 145

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 92/135 (68%), Positives = 106/135 (78%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  KL+A LPRGF D    +IR  N +   IR +YE+YGFDP+ETPL EY+D+LGKFLP
Sbjct: 6   KKPQKLKARLPRGFVDRTAGDIRAVNEMTAKIREVYEHYGFDPVETPLFEYTDALGKFLP 65

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D DRPN+GVFSLQD+D QW+SLRYDLTAPLAR+VAENF+ I  P RTYR G VFRNEK G
Sbjct: 66  DSDRPNEGVFSLQDEDEQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFRNEKPG 125

Query: 122 PGRFRQFIQCDVDNV 136
           PGRFRQF+Q D D V
Sbjct: 126 PGRFRQFMQFDADTV 140


>gi|218437512|ref|YP_002375841.1| ATP phosphoribosyltransferase regulatory subunit [Cyanothece sp.
           PCC 7424]
 gi|226702198|sp|B7KDF3|HISZ_CYAP7 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|218170240|gb|ACK68973.1| histidyl-tRNA synthetase 2 [Cyanothece sp. PCC 7424]
          Length = 408

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 94/437 (21%), Positives = 168/437 (38%), Gaps = 43/437 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I D ++ +++ +G+  I T  +E+ D+L          
Sbjct: 1   MIHQPPAGARDLLPLEVAQKGWINDCLQQVFQRWGYQRIVTSTIEWLDTLMAGGA---IE 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-PGRF 125
              V  LQD     + LR +LTA +AR          +P R      VFRN   G  GR 
Sbjct: 58  RSTVIQLQDTSEGTLGLRPELTASIARTAVSRMADSTYPQRICYRANVFRNPPPGYHGRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  V+ + +    AD E+ +++AD LE +G+   D+H+ +    +   +L      
Sbjct: 118 LEFYQAGVELLFAGGLLADGEILLLVADCLETLGLT--DWHLILGEAGLTRSLLSVFPDP 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++   L  L  I              L     D         +L     D++    S
Sbjct: 176 LRQQVRHCLAHLDYITL----------ENLTYPSADLRERALLLFDLRGNPADVLSKVAS 225

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           ++LE+             +     N    +  L+ +S  N   + +  ++V+  +YYTG 
Sbjct: 226 LELEE-------------SDRIIVNNFKSLIHLIEQSHPNPLPLILDLSLVQTFDYYTGL 272

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
           V++ +                 +G GGRYD L  +   + Q+ P  GFS+ +  L + L 
Sbjct: 273 VFKVVSSSDN--------QLRVLGQGGRYDQLLGLYHPQHQSAPGIGFSLNLEDLHLCLL 324

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGNQL 421
           S  SS    +++  +    +   + S      Y Q+LR +   +R  + LG  ++     
Sbjct: 325 STSSSGMP-RQIPVIDWLVIAQTTQSQVAAFNYAQLLRNSNTLVRVALDLG-GRSPEEIR 382

Query: 422 KYADRRNCPLAIIQGTG 438
            YA        +  G  
Sbjct: 383 DYARTCRIKTLVWIGED 399


>gi|323693061|ref|ZP_08107280.1| histidine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323502815|gb|EGB18658.1| histidine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 419

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 118/434 (27%), Positives = 187/434 (43%), Gaps = 48/434 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ +R+ +L+ I++ Y  YGF  IETP +E+ ++L      ++  
Sbjct: 3   LKKKPVTGMKDVLPAEMELRDYVLNIIKDTYRGYGFSSIETPCVEHIENLTSKQGGDN-- 60

Query: 67  NKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL RY + N   +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLNLETARSDADLVEEGLRYDLTVPLCRYYSNNAANLTTPFKALQVGS 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R +K   GRFRQF+QCD+D +G     A+ E  + +   L  +      + + +N+R 
Sbjct: 121 VWRADKPQKGRFRQFVQCDIDILGDGTNLAEIETILAITKALTRICPDNG-FTVRVNDRA 179

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL G+ +  G   D+       V   +DK+DK GL+GV   L E            A   
Sbjct: 180 ILKGMADYSGFPEDE----TDRVFIILDKMDKIGLEGVGAELLE------------AGYA 223

Query: 234 SEQIDIMVSFLS--IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E +D  V  L+   +  + + +L E +   +  EK    L  I + V +       ++ 
Sbjct: 224 KESVDKYVQLLAGIQNDAEGVRKLGETLSSVMDPEKA-ENLAYIMDTVSEINDVKCGLEF 282

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSV GGGRYD L+ +F G + PA G 
Sbjct: 283 DPTLVRGMGYYTGTIFEV----------AMEGFGGSVAGGGRYDKLIGKFTGVDTPACGI 332

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF- 410
           SIG  R+I  L                 +     + +   K     Q  R  G+R  +  
Sbjct: 333 SIGFERIITILMDSG-FKIPSTVGKKAYLFEKGLNKEQFGKVVKAAQEERAKGVRVAVAQ 391

Query: 411 LGSSKNFGN-QLKY 423
           +  +K F   QL  
Sbjct: 392 MNKNKKFQKEQLAK 405


>gi|226314857|ref|YP_002774753.1| ATP phosphoribosyltransferase regulatory subunit [Brevibacillus
           brevis NBRC 100599]
 gi|226097807|dbj|BAH46249.1| ATP phosphoribosyltransferase regulatory subunit [Brevibacillus
           brevis NBRC 100599]
          Length = 391

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 89/407 (21%), Positives = 152/407 (37%), Gaps = 46/407 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L  E P G  D   + +  +  +   +R   E +G+D I TP LEY D+     
Sbjct: 1   MAKP--LGFEKPLGMRDILPESLAKQRHLERELRQCIERWGYDEISTPSLEYFDT---VG 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                    +F L D  G  + LR D+T P+AR V+  +  +  P R Y    VFR ++ 
Sbjct: 56  AASATLTDRMFRLLDKQGHTVVLRPDMTTPIARVVSSLYKDVPLPIRLYYQVNVFRAQEK 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  ++ +G ++  ADAE   +    L A G+    + I I +   +DG+LE
Sbjct: 116 EAGRNAEFSQTGIELIGDASVDADAEAIALAVVCLRAAGV--ETFRIAIGHVDFVDGLLE 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +                              +  L E             ++++E    +
Sbjct: 174 EEIEDE-------------------PIRNQFRQFLYERDFVGFRQLLATVDISTEANSRL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            + L +   K   E+   + G     +    +  + E +   G   + + I   ++  L 
Sbjct: 215 EALLRLQGGKGKIEVARKLAGNGKAGRAVETIASLWESLEAYGVTED-LLIDFNLIINLN 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E                   + GGGRYD L+S+         G +   +   +
Sbjct: 274 YYTGVVFEGYAADLG----------SPLLGGGRYDQLLSQ--------FGRAASATGFAI 315

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            +  L   T ++K   P  +  + +  D         Q+LR  G+  
Sbjct: 316 KMDRLLQVTPSVKRQAPARVLLV-YTEDCRGTALAEAQLLRKDGLVV 361


>gi|56750735|ref|YP_171436.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus
           elongatus PCC 6301]
 gi|81299624|ref|YP_399832.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus
           elongatus PCC 7942]
 gi|81820693|sp|Q5N453|HISZ_SYNP6 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|93141277|sp|Q55267|HISZ_SYNE7 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|56685694|dbj|BAD78916.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus
           elongatus PCC 6301]
 gi|81168505|gb|ABB56845.1| histidyl-tRNA synthetase 2, putative [Synechococcus elongatus PCC
           7942]
          Length = 420

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 83/436 (19%), Positives = 158/436 (36%), Gaps = 45/436 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D   +++  +  I   ++ +++ +G+  I TP LE  D+L          
Sbjct: 1   MVHQPPAGTRDLLPQDVTQKRWIESRLQQVFQQWGYQRIITPTLERLDTLVAGGA---VQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG-RF 125
              V  +Q D+   + LR +LTA +AR           P R Y +  VFR    G   + 
Sbjct: 58  RSAVIQVQSDEESGLGLRPELTASIARAAVTRLAGSSLPLRLYYLANVFRPAFQGDRLQQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI---KRNDYHIGINNRKILDGILEKI 182
           R+  Q  V+ +G     ADAE+  ++AD L  +G        +H+ +    +   +L+  
Sbjct: 118 RELFQAGVELLGVGGTLADAEVLHVLADALAELGFGQPPLGSWHLVVGEASLTRSLLQPF 177

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                +K+ + +  L  +          ++        D +           +    +  
Sbjct: 178 PKDLREKVRQAIAQLDRVTLESLPLESQLR--------DRALLLHDLRGQPDQVFAKLQQ 229

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                LE+++ +    +                       G   + + +  +++R  +YY
Sbjct: 230 LTLTPLEQTLRDRLAQLVELYNASA---------------GPQDSPLLLDLSLLRSFDYY 274

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN--VPATGFSIGISRLIV 360
           TG V+E +         + P     +  GGRYD L+  +  Q    P  GFS  I  L  
Sbjct: 275 TGIVFEVVY--------ETPTGPWVLAQGGRYDRLLDVYDPQAAGQPGIGFSCNIENLQQ 326

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML-RTAGIRAEMFLGSSKNFGN 419
            L +     +    +       +  DS++        Q L R   +R E++L S +    
Sbjct: 327 VLLAANRLPHRPPAIDQ---LVIPVDSEAYGAALAEAQRLQRQDQLRVELYLDSDRRPEV 383

Query: 420 QLKYADRRNC-PLAII 434
              +A RR    +  +
Sbjct: 384 VQAFAQRRRIGRIVWV 399


>gi|325973219|ref|YP_004250283.1| histidyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|325989662|ref|YP_004249361.1| Histidyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574747|emb|CBZ40403.1| Histidyl-tRNA synthetase [Mycoplasma suis]
 gi|323651821|gb|ADX97903.1| histidyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 425

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 93/485 (19%), Positives = 167/485 (34%), Gaps = 74/485 (15%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPNKGVF 71
           RG      +E+R RN I   +     N  F  IE P  EYSD        +E+   K +F
Sbjct: 6   RGTRSIRGEELRQRNYIKKLLVQWARNNNFSEIELPTFEYSDLFVGSSEQEENILEKEIF 65

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
            L+   G+  +L+ + T  +AR +         V P +   +   +R E+   GR+R+F 
Sbjct: 66  FLE---GKKYALKPEGTISIAREIVNQKMIAREVSPLKFCYLTQCYRYERPQKGRYREFT 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+ V +++   + E+ + +   L +V        I                      
Sbjct: 123 QFGVEIVNANSVFFEIELILSLNKFLNSVLGLTPHLRINYLASS---------------- 166

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +K    E       D    A L+    D +       L+
Sbjct: 167 --------------------EIKKKWAEELRTYFSDPENSAKLSKISRDRIRENPIRILD 206

Query: 250 KSMHELYELVKGTIAGEKGF-NELVVISELVRKS-GYNSNRIKISSTIVRGLEYYTGCVY 307
                  ++VK +      F  E     E ++K       + +  + +VRGL+YYTG V+
Sbjct: 207 DKNDSHLQVVKDSPKIHNYFSEEDKKNVETIKKYLNCLGVKYQWDNNLVRGLDYYTGIVF 266

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP--ATGFSIGISRLIVALKSL 365
           E  +               ++ GGGRY+ L ++F+    P            +     +L
Sbjct: 267 EWEINNL------------TIAGGGRYNELFNKFQTGTTPKNTIPSLGLAVGIDRLHLAL 314

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +           +   +   +   K  +  Q L+  GI+ E      K+  +  KY+D
Sbjct: 315 NENNYKWPRKISYKLYLCNLMVNIEPKVILLVQKLKEEGIQVETNWEF-KDLNSHFKYSD 373

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           +      +I G  E +   + +K+  K  ++   + N E                L+  V
Sbjct: 374 KLGFRWLLIYGEKEHNNREIILKEQNKNYQIYFSLDNLEV---------------LIEEV 418

Query: 486 KKILQ 490
           K+ L+
Sbjct: 419 KRTLE 423


>gi|59808927|gb|AAH89973.1| Histidyl-tRNA synthetase 2-like [Rattus norvegicus]
          Length = 262

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 24/279 (8%)

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVI 275
             D   +   G  L  E  D +  ++      S+ E       +  +    +G  +L ++
Sbjct: 3   WEDVRLEMVAGKGLAPEVADRIGDYVQCHGGISLVEELFKDPRLSQSQLALQGLGDLKLL 62

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
            E +R  G  +++I +  ++ RGL+YYTG +YEA+L        ++ +  GSV  GGRYD
Sbjct: 63  FEYLRLFGI-ADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLNVGSVAAGGRYD 121

Query: 336 GLVSRFKG--QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            LV++F     +VP  G SIG+ R+   ++     +          +       + L + 
Sbjct: 122 RLVAQFDPKGHSVPCVGLSIGVERIFYLVEQKMKISCEKVRTTETQVFVATPQKNFLQER 181

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 L  AGI+AEM   ++     QL Y ++ + PL +I G  E++ G+++++ +A  
Sbjct: 182 LKIIAQLWDAGIKAEMLYKNNPKLLTQLHYCEKEDIPLMVIIGEQEQNEGVVKLRSVASR 241

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           +E+                  T+    LV+ ++K L E+
Sbjct: 242 EEV------------------TVNRESLVAEIQKRLSES 262


>gi|228990514|ref|ZP_04150479.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           pseudomycoides DSM 12442]
 gi|228769040|gb|EEM17638.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           pseudomycoides DSM 12442]
          Length = 420

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PDGTRDYVFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVF--SF 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D  G+ I LR D+T PLAR +  + +      +    G VFR  + 
Sbjct: 56  RNRPIDEEKMYKFFDQQGRIIVLRPDMTIPLARVIGTHGEEAP--VKLTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + IQ  ++ +G     A+ E  +     L+AVGI+   + I +   ++   I++
Sbjct: 114 LSGKYNEIIQTGIEIIGIDNIRAEIECIVSAIHALQAVGIQA--FTIELGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+    +++   R  +           LQ                  K  +   E + ++
Sbjct: 172 KLSFGEEEESLLRTYIESKNYAELSRFLQE-----------------KNLDRRDETVQLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +  +  + E  E +      ++    +  I + + K GY S  I I   +++ L 
Sbjct: 215 EKLPRLFGKLEVIEEAEKLASNYEMKQAIARIKEIYKTIEKLGYGS-YISIDLGMIQHLH 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++   +              G +  GGRYD L+  F  + + A G ++ +++++ 
Sbjct: 274 YYTGVIFRGYIYDVG----------GEIVSGGRYDELLGNFG-EPMSAVGLAVQVNQIVR 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+  +      K    +  +      D +++ +    +L+  G + E+ +    N  + 
Sbjct: 323 TLQEQQKQFKRKKLDMIIHYSL-----DRIAEAERLCGLLQKDGWKVELSMFE--NLQDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A ++     I
Sbjct: 376 FQFAKKKGIIKVI 388


>gi|294938792|ref|XP_002782201.1| histidyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239893699|gb|EER13996.1| histidyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 1267

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 90/366 (24%), Positives = 154/366 (42%), Gaps = 38/366 (10%)

Query: 6    KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
             +    P G  D    ++RIR+ +    R +   +GF   + P+LE      +   +E  
Sbjct: 928  NISFVPPSGTRDFFPDDMRIRDWLFSQWRAVSAQHGFSEYDAPVLENEHLYKRKAGEEIV 987

Query: 66   PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
              + +++  D +   ++LR ++T  LAR V     + V P + + I   +R E    GR 
Sbjct: 988  --EQMYNFVDKEDHHVTLRPEMTPTLARMV----LSRVLPLKWFSIPQCWRFETTQRGRK 1041

Query: 126  RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            R+  Q + D VG S  TA+ E+   M    + VG+   D  I +N+R IL  +L+  G+ 
Sbjct: 1042 REHYQWNCDIVGISDITAELELLATMVGFFKRVGLTSADVGIKVNSRAILQSVLKASGVG 1101

Query: 186  GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D+       V   IDK+DK G + V+ ++G     +  +F K A+              
Sbjct: 1102 ADE----FAKVCVVIDKIDKIGREEVQRVVGVVSAASIEEFKKLAD-------------- 1143

Query: 246  IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             +           +      E    +L  + +L R  G   + +   +++VRGL YYTG 
Sbjct: 1144 -ENCTRGESERSSLGVYPLSE--MTDLEGLFDLARNYGI-DDWLVFDASVVRGLAYYTGI 1199

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-KGQNVPATGFSIGISRLIVALKS 364
            V+EA           +     ++ GGGRYD L+S +     +P  GF  G   +   L++
Sbjct: 1200 VWEAF---------DRKGELRAIAGGGRYDRLLSLYGAPSEIPCVGFGFGDCVIYELLRA 1250

Query: 365  LESSTN 370
                  
Sbjct: 1251 AYKGMY 1256


>gi|160939045|ref|ZP_02086396.1| hypothetical protein CLOBOL_03939 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438008|gb|EDP15768.1| hypothetical protein CLOBOL_03939 [Clostridium bolteae ATCC
           BAA-613]
          Length = 421

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 77/420 (18%), Positives = 148/420 (35%), Gaps = 48/420 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M    +L    P G  D    E R +  + D I + +  YG++ I+TP  EY D   K  
Sbjct: 1   MAGNNRL-IHTPEGVKDSYNGECRKKLAVQDKILDTFYLYGYEHIQTPSFEYFDIFSK-- 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                P++ +F   D D   + LR D+T  +AR VA+ F     P R   +   F+N   
Sbjct: 58  DRGSVPDREMFKFFDRDNNTLVLRPDMTPAVARCVAKYFMDDPMPLRLCYLERTFKNNSS 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR ++  +   + +G  +E ADAEM  M+ D+L   G+K     +          +L+
Sbjct: 118 YQGRLKERAETGAELIGDDSEDADAEMIAMVIDSLRQAGLKEFQVEL--GQVAFYRSLLK 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +                     L++   + +   +            K   +      + 
Sbjct: 176 EA-------------------GLEEEVEEELNQYIENKNYFAVEGLLKNQPVDEGLKKVF 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +    +       +  + +            L  +  ++   G     +     ++   +
Sbjct: 217 LKLPELFGSLEQMQEAKKLTANPGALAAIERLEKVHSILESRG-LEAYVSYDLGMLSRYQ 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++A                  +  GGRYD L+ +F  ++ PA GF I + +L+ 
Sbjct: 276 YYTGIIFKAYT----------YGTGDYIVTGGRYDKLLVQFG-KDTPAVGFVIVVDQLMA 324

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL   +                + +++ + S+        R  G+  +       +   +
Sbjct: 325 ALSRQQIDVPVTLVNT-----VILYETSARSRALWLGSYFRDKGLAVQ-------SMKKK 372


>gi|226323915|ref|ZP_03799433.1| hypothetical protein COPCOM_01692 [Coprococcus comes ATCC 27758]
 gi|225207464|gb|EEG89818.1| hypothetical protein COPCOM_01692 [Coprococcus comes ATCC 27758]
          Length = 411

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 112/419 (26%), Positives = 182/419 (43%), Gaps = 44/419 (10%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
             D   KE+ IR+ ++  I++ Y+ +GF  IETP +E+ ++L      ++   K +F + 
Sbjct: 1   MKDMLPKEMEIRDYVIQMIKDTYKTFGFTSIETPCVEHIENLCSKQGGDN--EKLIFKIL 58

Query: 75  DDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
               +                LRYDLT PLARY A + + +  P +  +IG V+R ++  
Sbjct: 59  KRGEKLKIAEAKEEIDLVDGGLRYDLTVPLARYYANHANELPSPFKALQIGNVWRADRPQ 118

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GRFRQF+QCD+D +G     A+ E+ +     L  +     ++ + IN+R IL  +   
Sbjct: 119 RGRFRQFMQCDIDILGEPGNLAEIELILATTTMLGKMDFH--NFTVCINDRNILKAMAAF 176

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G   +D       V   +DK+DK G +GV   L E         T    L  E    + 
Sbjct: 177 SGFKEED----FDEVFIILDKMDKIGKEGVGEELVEMGYTKENVDTY-LGLFDEINPDV- 230

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                     +    E + G +  EK  + + +I   V  +     ++K   T+VRG  Y
Sbjct: 231 --------DGIRFCKEKLAGFL-DEKTADSMEMIISSVESAKEADFKVKFDPTLVRGQSY 281

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG ++E                 GSV GGGRYD ++ +F GQ+ PA GFSIG  R+++ 
Sbjct: 282 YTGTIFEVT----------MDEFGGSVAGGGRYDKMIGKFTGQDTPACGFSIGFERIVML 331

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EMFLGSSKNFGN 419
           L          K      +   +   + + K     +  R AG +   + +  +K F  
Sbjct: 332 LLE-NGYEIPSKRQKKAYLLEKNMHKEVILKVLEMAKADRAAGKQVLVVNMKKNKKFQK 389


>gi|154482688|ref|ZP_02025136.1| hypothetical protein EUBVEN_00364 [Eubacterium ventriosum ATCC
           27560]
 gi|149736464|gb|EDM52350.1| hypothetical protein EUBVEN_00364 [Eubacterium ventriosum ATCC
           27560]
          Length = 419

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 120/439 (27%), Positives = 193/439 (43%), Gaps = 53/439 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M    K       G  D   +E++IRN + + I++ Y+ +GF  IETP +E   +L    
Sbjct: 1   MALSKKPVT----GMKDILPEEMKIRNYVQNVIKDTYKAFGFTQIETPCVENISNLTNKQ 56

Query: 61  PDEDRPNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCR 107
             E+   K +F +     +                LRYDLT PL RY + N + +  P +
Sbjct: 57  GGEN--EKLIFKILKRGEKLNLETAQTDMDVVDNGLRYDLTVPLVRYYSNNANNLPSPFK 114

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
             ++G V+R ++   GR+RQF+QCD+D +G  +  A+ E+ +    TL  +G K  ++ I
Sbjct: 115 ALQMGSVWRADRPQRGRYRQFMQCDIDILGDPSNLAEIELILATTTTLGKLGFK--NFQI 172

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            IN R+IL  +    G   +        V   +DK+DK GL+GVK  L +          
Sbjct: 173 RINERRILKAMAAYSGFPEES----YDSVFIILDKMDKIGLEGVKEELIKYEF------- 221

Query: 228 KGANLTSEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
                + E ++  VS      +++  +  L E     +  +     +  I E V+ +  +
Sbjct: 222 -----SEESVNKYVSLFKEIEQQANPIDYLAEKFGDYME-DDVKQWMNEIIESVKATKSS 275

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
              I    T+VRG+ YYTG ++E             P   GS GGGGRY+ +V +F G +
Sbjct: 276 DFEIVFDPTLVRGMSYYTGTIFEI----------AIPEFGGSCGGGGRYNKMVGKFIGHD 325

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           VPA GFSIG  R+++ L          +      +       D+L       Q  R  G 
Sbjct: 326 VPACGFSIGFERIVLLLMEQG-FKIPEEYNKVAYLIEKGVKEDALCDVIAQAQEERKNGT 384

Query: 406 RAEMF-LGSSKNFGN-QLK 422
           +  +  +  +K F   QLK
Sbjct: 385 QVLVTRMNKNKKFQKEQLK 403


>gi|255723487|ref|XP_002546677.1| histidyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240130808|gb|EER30371.1| histidyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 320

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 26/289 (8%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K      + P+G  D   K++ IR  I  ++ N+++ +G   I+TP+ E  + L     +
Sbjct: 19  KVQDFVLKTPKGTKDWADKDMVIREAIFGTLSNLFKKHGGVTIDTPVFELREILTGKYGE 78

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +   +K +++L+D  G+  SLRYDLT P AR+VA N    +                   
Sbjct: 79  D---SKLIYNLEDQGGELTSLRYDLTVPFARFVACNNIANIKRYHIA-KVYRRDQPAMTK 134

Query: 123 GRFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           GR R+F QCD D  G+        E+  ++ D L  +GI+  D+ + +N+RKILDGI E 
Sbjct: 135 GRMREFYQCDFDVAGNYDTMVPDSEILALLCDGLTGLGIQ--DFKVKLNHRKILDGIFEA 192

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+  +D       V  A+DKLDK   + VK            +            D + 
Sbjct: 193 CGVKEED----VRKVSSAVDKLDKVEWKQVKA-----------EMVNEKGQDEAVADKIG 237

Query: 242 SFLSIDLEK----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
            F+  +          +  E++K +   ++G  E+ ++++ V   G N+
Sbjct: 238 EFVKHNGSIREVLEYLQGNEIIKSSATAQEGIKEMEILADYVDAFGINN 286


>gi|266624505|ref|ZP_06117440.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           hathewayi DSM 13479]
 gi|288863643|gb|EFC95941.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           hathewayi DSM 13479]
          Length = 420

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 80/417 (19%), Positives = 147/417 (35%), Gaps = 41/417 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E   +  I + I  ++  YG+  IETP  E+ D   +         + +
Sbjct: 8   TPDGVRDIYGVECTRKAAIQNRILEVFHLYGYQDIETPTFEFFDIFNESRGS--VKAREM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           F   D D   + LR D T  +AR V + F     P R   +   F N     GR ++  Q
Sbjct: 66  FKFFDRDNHTLVLRPDETPAIARCVTKYFTEEDMPLRLCYLERTFINNTSYQGRLKEAAQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+ +G  +  ADAE+  M+   L+A G+      +         G+LE+ G+  + + 
Sbjct: 126 TGVELIGDDSSDADAEILAMVIRALKAAGLTEFQVEL--GEVDFFRGLLEEAGMDEEMEE 183

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
             R                    L+         +      +  E  +  +    +    
Sbjct: 184 RLRE-------------------LIENKNYFGVEELVMEQPIPQELKEAFLKLPELFGSL 224

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              +            +  + L  ++ ++      S  +     ++   +YYTG +++A 
Sbjct: 225 EEIQAAREFTRNPRALRAIDRLEEVNRILE-YYDLSEYVSYDLGMLSQYQYYTGIIFKAY 283

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                            +  GGRYD L+ +F  ++ PA GF I +  L++AL   +    
Sbjct: 284 T----------YGTGDYIVNGGRYDKLLVQFG-KDAPAVGFGISVDDLMLALSRQKI--- 329

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQLKYADR 426
                  V+ T +  + +S  +     +  R   I  ++ L  + +       YA R
Sbjct: 330 --DTPVRVVGTMILFEPESREQAIQLAKHFRDTSIPVQLQLKKAGRTLEAYQSYAAR 384


>gi|530225|gb|AAA64445.1| histidyl tRNA synthetase [Synechococcus sp.]
          Length = 420

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 83/433 (19%), Positives = 151/433 (34%), Gaps = 39/433 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D   +++  +  I   ++ +++ +G+  I TP LE  D+L          
Sbjct: 1   MVHQPPAGTRDLLPQDVTQKRWIESRLQQVFQQWGYQRIITPTLERLDTLVAGGA---VQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG-RF 125
              V  +Q D+   + LR +LTA +AR           P R Y +  VFR    G   + 
Sbjct: 58  RSAVIQVQSDEESGLGLRPELTASIARAAVTRLAGSSLPLRLYYLANVFRPAFQGDRLQQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+  Q  V+ +G     ADAE+  ++AD L  +G  +                   +   
Sbjct: 118 RELFQAGVELLGVGGTLADAEVLHVLADALAELGFGQPPLGSWHLVVGEASLTRSLLQPF 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   +    +   D++    L      L     D +           +    +     
Sbjct: 178 PKDLREKVRQAIAQFDRVTLESLP-----LESQLRDRALLLHDLRGQPDQVFAKLQQLTL 232

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             LE+++ +    +                       G   + + +  +++R  +YYTG 
Sbjct: 233 TPLEQTLRDRLAQLVELYNASA---------------GPQDSPLLLDLSLLRSFDYYTGI 277

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN--VPATGFSIGISRLIVALK 363
           V+E +         + P     +  GGRYD L+  +  Q    P  GFS  I  L   L 
Sbjct: 278 VFEVVY--------ETPTGPWVLAQGGRYDRLLDVYDPQAAGQPGIGFSCNIENLQQVLL 329

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML-RTAGIRAEMFLGSSKNFGNQLK 422
           +     +    +       +  DS++        Q L R   +R E++L S +       
Sbjct: 330 AANRLPHRPPAIDQ---LVIPVDSEAYGAALAEAQRLQRQDQLRVELYLDSDRRPEVVQA 386

Query: 423 YADRRNC-PLAII 434
           +A RR    +  +
Sbjct: 387 FAQRRRIGRIVWV 399


>gi|302387917|ref|YP_003823739.1| Histidine--tRNA ligase [Clostridium saccharolyticum WM1]
 gi|302198545|gb|ADL06116.1| Histidine--tRNA ligase [Clostridium saccharolyticum WM1]
          Length = 419

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 113/441 (25%), Positives = 186/441 (42%), Gaps = 57/441 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+++R  +++ IR  Y  +GF  IETP +E+ ++L      ++  
Sbjct: 3   LKKKPVTGMKDILPAEMQVREYVMNQIRETYGGFGFHSIETPCVEHIENLTSKQGGDN-- 60

Query: 67  NKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY + N  ++  P ++ ++G 
Sbjct: 61  EKLIFKIMKRGEKLNLESAQAENDLVDSGLRYDLTVPLSRYYSNNAASLPAPFKSLQMGS 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G S   A+ E+ +     L  +G K   Y + IN+R 
Sbjct: 121 VWRADRPQKGRFRQFVQCDIDILGDSTRLAETELILATTTLLGKIGFKG--YTVRINDRN 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL G+    G   +        V   +DK+DK G  GV   L E            A   
Sbjct: 179 ILKGMAAFCGFPEE----AYDQVFIILDKMDKIGSDGVARELAE------------AGYD 222

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            ++I+  +S        +  +  L E +K ++  ++    L  I + V +   +   I  
Sbjct: 223 QDKINKYLSLFETVAPDASGVRSLGEALKDSMDQQQA-ENLAAIMDSVSQISTSQFHIVF 281

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E  +     +               RYD ++ +F G + PA GF
Sbjct: 282 DPTLVRGMSYYTGTIFEIQVDGFPGSVGGGG----------RYDKMIGKFTGMDTPACGF 331

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF- 410
           SIG  R+I  L   E  T   KE     +       + L+         R  G    +  
Sbjct: 332 SIGFERIITILMD-EGFTVPGKEDKVAFLIEKGVSDEVLNGAMKEAMEKRAKGGTVLVSQ 390

Query: 411 LGSSKNFGN---------QLK 422
           +  +K F           Q K
Sbjct: 391 MNKNKKFQKDSLQKEGYTQFK 411


>gi|89098772|ref|ZP_01171653.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus sp. NRRL
           B-14911]
 gi|89086448|gb|EAR65568.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus sp. NRRL
           B-14911]
          Length = 389

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 86/410 (20%), Positives = 162/410 (39%), Gaps = 46/410 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D   +    ++R+  SI    +++G+  +ETP LEY +++G      D   +
Sbjct: 2   FEKPLGMRDTLPEIYETKSRVRSSIEEEMKSWGYQFMETPALEYYETVGSASATLD---Q 58

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D  G  + LR D+TAP+AR  A        P R      V+R ++   GR  +F
Sbjct: 59  QLFKLLDQQGHTLVLRPDMTAPIARVAASRLLKEDLPLRLAYSANVYRAQQREGGRPAEF 118

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G  + +AD E   ++  +L+  G+   D+ + + +   +     ++    + 
Sbjct: 119 EQIGVELIGDDSISADGEGLALLISSLKKAGL--EDFQLSVGHIGFVQEFFRQVLGTEER 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                                 +   L E       +  K   L+S     ++ FL +  
Sbjct: 177 A-------------------NELTRFLYEKNYVGYREHVKNLPLSSIDKQRLLDFLQLRG 217

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +   E    +     G +   +L  + + +   G    +IK+  T+V  + YYTG ++E
Sbjct: 218 GREAIEQAFSLIENNKGREAIVQLERLWDTMADFGEGE-KIKLDLTLVSHMSYYTGILFE 276

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
              G               +G GGRYD L+ +F      ++G +    RL   L++L  +
Sbjct: 277 VYAGNVGF----------PIGNGGRYDLLLKKFGK----SSGATGFAIRLDRLLEALGGA 322

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-FLGSSKNF 417
                    +        S+   +     +++R +GI+A +  +   KN 
Sbjct: 323 GEKEPLHCII------FSSERRREAYEKAKVMRKSGIKAVLQDISGVKNL 366


>gi|323485942|ref|ZP_08091276.1| hypothetical protein HMPREF9474_03027 [Clostridium symbiosum
           WAL-14163]
 gi|323400756|gb|EGA93120.1| hypothetical protein HMPREF9474_03027 [Clostridium symbiosum
           WAL-14163]
          Length = 419

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 117/434 (26%), Positives = 186/434 (42%), Gaps = 48/434 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ +R+ +L+ I++ Y  YGF  IETP +E+ ++L      ++  
Sbjct: 3   LKKKPVTGMKDVLPAEMELRDYVLNIIKDTYRGYGFSSIETPCVEHIENLTSKQGGDN-- 60

Query: 67  NKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL RY + N   +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLNLETARSDADLVEEGLRYDLTVPLCRYYSNNAANLTTPFKALQVGS 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R +K   GRFRQF+QCD+D +G     A+ E  + +   L  +      + + +N+R 
Sbjct: 121 VWRADKPQKGRFRQFVQCDIDILGDGTNLAEIETILAITKALTRICPDNG-FTVRVNDRA 179

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL G+ +  G   ++       V   +DK+DK GL+GV   L E            A   
Sbjct: 180 ILKGMADYSGFPENE----TDRVFIILDKMDKIGLEGVGAELLE------------AGYA 223

Query: 234 SEQIDIMVSFLS--IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E +D  V  L+   +  + + +L E +   +  EK    L  I + V +       ++ 
Sbjct: 224 KESVDKYVELLAGIQNDAEGVRKLGETLSSVMDPEKA-ENLAYIMDTVSEINDVKCGLEF 282

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSV GGGRYD L+ +F G + PA G 
Sbjct: 283 DPTLVRGMGYYTGTIFEV----------AMEGFGGSVAGGGRYDKLIGKFTGVDTPACGI 332

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF- 410
           SIG  R+I  L                 +       +   K     Q  R  G+R  +  
Sbjct: 333 SIGFERIITILMDSG-FKIPSTVGKKAYLFEKGLSKEQFGKVVKAAQEERAKGVRVAVAQ 391

Query: 411 LGSSKNFGN-QLKY 423
           +  +K F   QL  
Sbjct: 392 MNKNKKFQKEQLAK 405


>gi|291524783|emb|CBK90370.1| ATP phosphoribosyltransferase regulatory subunit [Eubacterium
           rectale DSM 17629]
          Length = 396

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 81/409 (19%), Positives = 158/409 (38%), Gaps = 41/409 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E + +  + D +      YG+  I TP  E+ +  G  +     P+K +
Sbjct: 8   TPDGVRDIYNGECKKKLYLQDKLHRTLLKYGYHDIMTPTFEFFNIFGSDVGTT--PSKDL 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D +G  + LR D T  +AR  A+ +     P +   +G  F N     GR ++  Q
Sbjct: 66  YKFFDKEGNTLVLRPDFTPSIARSAAKYYIEDDMPVKLCYLGNTFINSSDYQGRLKESTQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
           C  + +G  + +ADAE+  M  +++   G+K  ++ I + + +   G+ +  GL G+ + 
Sbjct: 126 CGAELIGDGSISADAEILSMTVESMLESGLK--NFQISVGHSQFFYGLTKAAGLSGEQE- 182

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                             + ++ L+         +F    ++  +   +     + DL+ 
Sbjct: 183 ------------------ENLRELIANKNFFGVEEFVDSLSMNDKLRKLFGLLDNFDLQD 224

Query: 251 S-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E  +L KG        + L+ + E ++  G     I     ++    YYTG +++ 
Sbjct: 225 EQLMEALKLAKGYDEILSSIDTLLKLREYLKAYGI-EKYISYELGLISDYTYYTGIIFQG 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYD L+S F  ++  A GF+I + +L+ AL   +   
Sbjct: 284 YT----------YGTGEPIVKGGRYDKLLSHFG-KDAAAIGFAIVVDQLMAALSRQDIDV 332

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
             I+         +  +  +       +  LR  G+  +M L       
Sbjct: 333 PVIENSS-----LIVFEEAAYHAAIKRSMELRRDGVNTQMVLKDKNKTK 376


>gi|228996614|ref|ZP_04156253.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus mycoides
           Rock3-17]
 gi|228763246|gb|EEM12154.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus mycoides
           Rock3-17]
          Length = 420

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PDGTRDYVFEECTLIEEVEHKLRRTFLERGYEEIRTPTIEFYDVF--SF 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D  G+ I LR D+T PLAR +  + +      +    G VFR  + 
Sbjct: 56  RNRPIGEEKMYKFFDQQGRIIVLRPDMTIPLARVIGTHGEEAP--VKLTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + IQ  ++ +G     A+ E  +     L+AVGI+   + I +   ++   I++
Sbjct: 114 LSGKYNEIIQTGIEIIGIDNIRAEIECIVSAIHALQAVGIQA--FTIELGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+    +++   R  +           LQ                  K  +   E + ++
Sbjct: 172 KLSFGEEEESLLRTYIESKNYAELSRFLQE-----------------KNLDRRDETVQLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +  +  + E  E +      ++    +  I + + K GY S  I I   +++ L 
Sbjct: 215 EKLPRLFGKLEVIEEAEKLASNYEMKQAIARVKEIYKTIEKLGYGS-YISIDLGMIQHLH 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++   +              G +  GGRYD L+  F  + + A G ++ +++++ 
Sbjct: 274 YYTGVIFRGYIYDVG----------GEIVSGGRYDELLGNFG-EPMSAVGLAVQVNQIVR 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+  +      K    +  +      D +++ +    +L+  G + E+ +    N  + 
Sbjct: 323 TLQEQQKQFKRKKLDMIIHYSL-----DRIAEAERLCGLLQKDGWKVELSMFE--NLQDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A ++     I
Sbjct: 376 FQFAKKKGIIKVI 388


>gi|291518576|emb|CBK73797.1| histidyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 419

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 114/431 (26%), Positives = 186/431 (43%), Gaps = 49/431 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  +   G  D    E+ +R+ +   I++ Y ++GF PIETP +E   +L      E+  
Sbjct: 3   LNKKPVNGMKDILPYEMEVRDYVTSIIKDTYRSFGFTPIETPAMESIGNLSNKQGGEN-- 60

Query: 67  NKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                +RYDLT PL R+ + + + +  P +  +IG 
Sbjct: 61  EKLIFKVMKRGEKLNIPEAQSEEDVVDFGMRYDLTVPLCRFYSNHANELSSPFKALQIGS 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GR+RQF QCD+D +G  +  A+ E+ +    TL  +G K  ++ I IN R+
Sbjct: 121 VWRADRPQRGRYRQFTQCDIDILGEPSNLAEIELILATTTTLGRIGFK--NFEIRINERR 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL  +    G   +D       +   +DK+DK GL GV   L E            A  +
Sbjct: 179 ILKAMAAYAGFSEED----YDSIFITLDKMDKIGLDGVSAELLE------------AGYS 222

Query: 234 SEQIDIMVS-FLSIDLEKSMHELYELVKGT---IAGEKGFNELVVISELVRKSGYNSNRI 289
            E ID  V  F  +D  K +    +++          +  + +  I+  V  +      +
Sbjct: 223 KESIDKYVELFALLDDVKDVAAGMDVLLNKLGEFLDTEVADWMREIAAAVNATKEAQFEL 282

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
               T+VRG+ YYTG ++E             P   GS GGGGRYD ++  F GQN PA 
Sbjct: 283 VFDPTLVRGMSYYTGTIFEI----------AIPEFGGSCGGGGRYDKMIGNFTGQNTPAC 332

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GFSIG  R+I+ L                 +    + ++ L++     +  R  G    +
Sbjct: 333 GFSIGFERIILLLMEQG-FKVPGASKKVAYLVEKGYPAEKLAEVMSQAKAARADGQTVLV 391

Query: 410 F-LGSSKNFGN 419
             +  +K F  
Sbjct: 392 VRMNKNKKFQK 402


>gi|229004263|ref|ZP_04162064.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus mycoides
           Rock1-4]
 gi|228757124|gb|EEM06368.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus mycoides
           Rock1-4]
          Length = 420

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PDGTRDYVFEECTLIEEVEHKLRRTFLERGYEEIRTPTIEFYDVF--SF 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D  G+ I LR D+T PLAR +  + +      +    G VFR  + 
Sbjct: 56  RNRPIDEEKMYKFFDQQGRIIVLRPDMTIPLARVIGTHGEEAP--VKLTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + IQ  ++ +G     A+ E  +     L+AVGI+   + I +   ++   I++
Sbjct: 114 LSGKYNEIIQTGIEIIGIDNIRAEIECIVSAIHALQAVGIQA--FTIELGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+    +++   R  +           LQ                  K  +   E + ++
Sbjct: 172 KLSFGEEEESLLRTYIESKNYAELSRFLQE-----------------KNLDRRDETVQLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +  +  + E  E +      ++    +  I + + K GY S  I I   +++ L 
Sbjct: 215 EKLPRLFGKLEVIEEAEKLASNYEMKQAIARVKEIYKTIEKLGYGS-YISIDLGMIQHLH 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++   +              G +  GGRYD L+  F  + + A G ++ +++++ 
Sbjct: 274 YYTGVIFRGYIYDVG----------GEIVSGGRYDELLGNFG-EPMSAVGLAVQVNQIVR 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+  +      K    +  +      D +++ +    +L+  G + E+ +    N  + 
Sbjct: 323 TLQEQQKQFKRKKLDMIIHYSL-----DRIAEAERLCGLLQKDGWKVELSMFE--NLQDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A ++     I
Sbjct: 376 FQFAKKKGIIKVI 388


>gi|77407452|ref|ZP_00784315.1| histidyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77173940|gb|EAO76946.1| histidyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 105

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ + P+G  D    E      + + IRN+++ Y +D I TP+ E+ + + + + D  D 
Sbjct: 1   MKLQKPKGTQDILPGESAKWQYVENVIRNLFKQYHYDEIRTPMFEHYEVISRSVGDTTDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR 107
             K ++   D   + I+LR + TAP+ R   EN        +
Sbjct: 61  VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQK 102


>gi|118443872|ref|YP_877144.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium novyi
           NT]
 gi|166219828|sp|A0PXP2|HISZ_CLONN RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|118134328|gb|ABK61372.1| histidyl-tRNA synthetase [Clostridium novyi NT]
          Length = 421

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 91/465 (19%), Positives = 188/465 (40%), Gaps = 48/465 (10%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            KL+   P G  D   KE   +  +   +RN+Y+  GF  I +P LE+ D       ++ 
Sbjct: 2   DKLKKYTPDGMRDILFKECEEKLYVEKKLRNLYKLNGFSEIISPTLEFYDVFN--FENQP 59

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              + ++ L D +G+ + L+ D+T P+ R VA   +   +P +      +FR  ++  G+
Sbjct: 60  IAQEKMYKLFDRNGRILVLKPDMTMPIGRIVATKVNYKDYPLKLCYTSNIFRINENLNGK 119

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             +  Q  ++ +G     ADAE+ +   ++L  +G+K  ++ I +   K    I++   +
Sbjct: 120 TSEITQSGIEIIGIENIKADAEVVITAIESLLQLGLK--NFKIELGQSKFFKEIIKNENI 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN--LTSEQIDIMVS 242
           + ++                      +K L+         D+ K     + ++ I I+  
Sbjct: 178 NKEEVF-------------------TLKNLIENKNYVALKDYLKEKTKIIKADTIKILEQ 218

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
              +  +  +    + +       K  +E++ + +++ K G  S  + I   +++ ++YY
Sbjct: 219 LPRMFGDIGVVYEAKNLVNDNEQLKALDEILSLYKIIDKVG-LSKYVSIDLGMIQDIDYY 277

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +++  +            V   +  GGRYD L+  F   ++P+TGF I I  +I AL
Sbjct: 278 TGVIFKGYVE----------GVGDYILSGGRYDKLIGNFGC-DLPSTGFGINIDNIIEAL 326

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +        +  +       +  ++  L++       +R   I  E+ L  +    + +K
Sbjct: 327 R-----IYEVLNIRKFRNVILHCENKYLNRAYKIANRVRKNNIICEISLRDT--IEDTIK 379

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           YA  +     I     E     ++I D+   K     I N     
Sbjct: 380 YARSKCVDKIIFIDNREF----IKIYDINFNKSKEVIIDNFLEEL 420


>gi|167750035|ref|ZP_02422162.1| hypothetical protein EUBSIR_01003 [Eubacterium siraeum DSM 15702]
 gi|167657056|gb|EDS01186.1| hypothetical protein EUBSIR_01003 [Eubacterium siraeum DSM 15702]
 gi|291530454|emb|CBK96039.1| ATP phosphoribosyltransferase, regulatory subunit [Eubacterium
           siraeum 70/3]
          Length = 406

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 87/440 (19%), Positives = 159/440 (36%), Gaps = 48/440 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E   R    D +R ++  +G+  + TP LE+ D             + +
Sbjct: 8   TPEGTRDLLFDECVARKEAEDKLRAVFTAHGYSEVITPALEFYDVFNNKTRS--FRQEDM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D  G+ + +R D T P+AR VA      VFP + +    ++R      GR  +F+Q
Sbjct: 66  YKLTDGKGRLMVMRPDSTMPIARIVATRLRDGVFPLKLFCSQNIYRCNPKMAGRDDEFMQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+ +G   + +D E   + A  L +     +D  + I +      +LEK+ +  +   
Sbjct: 126 SGVEIIGGDEKRSDLEALSLAAQVLNS--CSSDDVRLEIGDNTFYKLLLEKLDIDDE--- 180

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG----ANLTSEQIDIMVSFLSI 246
                             + V+ L+    T +   F K             +I++    +
Sbjct: 181 ------------------ETVRSLIESKNTPDLTQFIKENVDSNPEKRRYSEILLQLPDL 222

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                + +  E +    A      EL    + +RK     ++I +   +V   EYYTG V
Sbjct: 223 FGGAEVFDKAEKLFAGTALSDRLTELKETFDALRKL-EAEDKITVDLGLVNKAEYYTGIV 281

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +   +               +V  GGRYD L+  F   ++PA GF++ ++ +        
Sbjct: 282 FRGYIEEYGQ----------AVLSGGRYDTLIGSFGADDMPAVGFAVNVNAIAA----AN 327

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +N   +     +     D D +     +   L + GI AE            ++YA  
Sbjct: 328 LRSNRSTKARHAEVLVFAADEDLI-DGISHCTKLISKGISAEFSTC--PTLDAAMEYAKA 384

Query: 427 RNCPLAIIQGTGERSRGMLQ 446
                  I    E++   + 
Sbjct: 385 NKIGRIDII-DKEKNEQPVT 403


>gi|302671358|ref|YP_003831318.1| histidyl-tRNA synthetase HisS [Butyrivibrio proteoclasticus B316]
 gi|302395831|gb|ADL34736.1| histidyl-tRNA synthetase HisS [Butyrivibrio proteoclasticus B316]
          Length = 421

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 110/431 (25%), Positives = 184/431 (42%), Gaps = 48/431 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  +   G  D    E+++R+  +  I+  Y  +GF  IETP++E   +L      E+  
Sbjct: 3   LIKKPVTGMRDILPSEMQLRDYCIGVIKKTYAEFGFTSIETPVVESLANLNSKQGGEN-- 60

Query: 67  NKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL R+ A + + +  P +  ++G 
Sbjct: 61  EKLIFKVMKRGEKLNLETAKEENDLTDSGLRYDLTVPLVRFYANHANELPSPFKALQMGN 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           VFR ++   GR+RQF+QCD+D +G  +  A+ E+ +    TL  +G K  D+ I IN+R+
Sbjct: 121 VFRADRPQKGRYRQFMQCDIDILGEPSNLAEIELILATTTTLGRLGFK--DFKIRINDRR 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L  +    G   ++       V   +DK+DK G+ GV   L +                
Sbjct: 179 MLKAMAAYSGFAEEE----YDNVFITLDKMDKIGIDGVAEELVKQ------------GYP 222

Query: 234 SEQIDIMVS-FLSIDLEKSMHELYELVK--GTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            E +D  +  F   + +K++  +  +    G    E   N L  I   V  S      ++
Sbjct: 223 QENVDKYLELFREAEGKKNLEAIKVIADKIGDFLDEDTKNNLNEIISSVDASKTAQFEME 282

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              T+VRG+ YYTG ++E  +     +               RYD +V +F GQ+ PA G
Sbjct: 283 FDPTLVRGMSYYTGTIFEIAMTQYGGSCGGGG----------RYDKMVGKFLGQDTPACG 332

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           FSIG  R+I+ +   E      +      +       + L++     Q  R AG +    
Sbjct: 333 FSIGFERIIMIMMD-EGFKIPGENDKVAFLIEKGIKGERLTEIIAEAQKERAAGKKVLTV 391

Query: 411 -LGSSKNFGNQ 420
            +  +K F  Q
Sbjct: 392 RMAKNKKFQKQ 402


>gi|75907208|ref|YP_321504.1| ATP phosphoribosyltransferase regulatory subunit [Anabaena
           variabilis ATCC 29413]
 gi|109892200|sp|Q3MEH7|HISZ_ANAVT RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|75700933|gb|ABA20609.1| Histidyl-tRNA synthetase 2, putative [Anabaena variabilis ATCC
           29413]
          Length = 404

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 91/434 (20%), Positives = 173/434 (39%), Gaps = 49/434 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D    ++  +  I D ++ ++  +G+  I T  LE  D+L      E   
Sbjct: 1   MVYQPAAGARDLLPLDVAQKRWIEDKLQQVFHRWGYHRIITSTLERMDTLMAG---EAIQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE-KHGPGRF 125
            + V  LQ+ + + + LR +LTA +AR V      +  P R Y    VFR   ++   R 
Sbjct: 58  RQMVIQLQNSEDEELGLRPELTASIARAVVTRMTNLRHPQRLYYNANVFRRIWENRHNRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           ++F Q  V+ +G     A+AE+ ++  + L A+G++  D+H+ +    I   +L+   ++
Sbjct: 118 QEFYQAGVELLGVGGLLANAEVLLLAGNCLTALGLQ--DWHLILGEAGITRSLLDAFPIN 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              K+   +  L  I          ++                           ++  L 
Sbjct: 176 LRAKVRSAIAHLDRITIDTLPLTDELRER-----------------------ARIMLDLR 212

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +    + ++  L       ++  N L  + EL+   G     I +  ++++ ++YYTG 
Sbjct: 213 GNSTDVLQKVSSLNLDAEQ-QEAVNNLQSLVELLESGGKFP--IILDLSLIQTIDYYTGI 269

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
           V+E +                 +G GGRYD L  +   +G+N+P  GF + I  L   L 
Sbjct: 270 VFEIVNNTDSQA--------RVLGRGGRYDQLLGLYHPQGENIPGIGFVLNIEDLYQVLL 321

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGNQL 421
           + +                +  +  + S    + Q LR +   +R E+ LG   +     
Sbjct: 322 TTQQLPQETPASDW---LVVPENPKAHSAAFAHAQKLRESPDLVRVELDLG-GTDIPAIQ 377

Query: 422 KYA-DRRNCPLAII 434
           +YA DRR   +A I
Sbjct: 378 QYARDRRIAQIAWI 391


>gi|197301690|ref|ZP_03166760.1| hypothetical protein RUMLAC_00416 [Ruminococcus lactaris ATCC
           29176]
 gi|197299130|gb|EDY33660.1| hypothetical protein RUMLAC_00416 [Ruminococcus lactaris ATCC
           29176]
          Length = 416

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 87/402 (21%), Positives = 149/402 (37%), Gaps = 41/402 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +   P G  D   KE  I+  +   +  +  +YG+  I+TP  EY D   K +       
Sbjct: 4   KLHTPEGVRDIYNKECEIKLTLQKKLGTVLHSYGYQDIQTPTFEYFDVFRKEIGSTSA-- 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++   D +G  ++LR D+T  +AR VA  F+T  FP R    G  F N     GR ++
Sbjct: 62  REMYKFFDREGNILALRPDITPSIARAVATLFETEDFPIRLCYAGNTFINHSSYQGRLKE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q   + +G  +  ADAEM  M+ D L+  G+K     + I +   +  + +  GL  D
Sbjct: 122 NTQLGAELIGVDSIEADAEMLAMVVDGLKKTGLKEFQ--VSIGHIDFIQSLFQAAGLEED 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +                    + ++ L+         +     ++     +       + 
Sbjct: 180 EA-------------------EELRTLIANRNFFGVEEVLDHMDVADSVKEAFHLLPELT 220

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
               + +    V       +  + L  I EL+R  G   + I    ++     YYTG ++
Sbjct: 221 GGAEILDQALSVAPGEKAGQAIHRLKQIDELLRLYGV-EDHITFDLSMSGNYGYYTGIIF 279

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 +V  GGRYD L+ +F  +N P+ GF+I +  L+ AL     
Sbjct: 280 RAYT----------YGTGDAVVRGGRYDHLLEKFG-KNTPSIGFAIILDELMNALNRQNI 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                     V         D+        +  R+ G   EM
Sbjct: 329 QVETGSRNLLVY------TQDTEKWAISLARTFRSKGKNIEM 364


>gi|291550618|emb|CBL26880.1| histidyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 421

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 110/429 (25%), Positives = 187/429 (43%), Gaps = 48/429 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ IR+ ++  I+  Y ++GF  IETP +E+ ++L      ++  
Sbjct: 3   LKKKPVTGMKDILPAEMEIRDYVIGLIKETYRSFGFSSIETPCVEHIENLCSKQGGDN-- 60

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY A + + +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLRLAEAKEEADLVDGGLRYDLTLPLSRYYANHSNELPAPFKALQMGS 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GR+RQF+QCD+D +G  +  A+ E+ +     L  +    N++ I IN+R+
Sbjct: 121 VWRADRPQRGRYRQFMQCDIDILGEPSNLAEIELILATTSLLGKLDF--NNFTIRINDRR 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L  +    G    D       V   +DK+DK GL GV   + E                
Sbjct: 179 FLKAMAAYSGFEEKD----YDSVFITLDKMDKIGLDGVAAEMKEN------------GYA 222

Query: 234 SEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E ++  +          + +    E ++G +  E   + L +I   V  +     R+  
Sbjct: 223 EESVEKYLQLFKEITGDVEGVRACKEKLQGFLP-EDAADSLEMIITSVESAKEADFRMLF 281

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQ+ PA GF
Sbjct: 282 DPTLVRGMSYYTGTIFEI----------SMDEFGGSVGGGGRYDKMIGKFTGQDTPAVGF 331

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE-MF 410
           SIG  R+++ L           +     +   +   + + K     +  R AG +   M 
Sbjct: 332 SIGFERIVMLLMERG-YKVPTSKEKKAFLIEKNMPKEGMLKVLDLAKKERAAGRQVMIMN 390

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 391 MKKNKKFQK 399


>gi|332866108|ref|ZP_08436836.1| putative histidine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332734854|gb|EGJ65947.1| putative histidine--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 234

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 25/244 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVF 71
           +GF D    +     R+   + ++ + YG+  I  P++E +    + + D  D   K ++
Sbjct: 8   KGFNDVLPTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATDIVEKEMY 67

Query: 72  SLQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  D     + ++LR + TA   R + E+        R + +GP+FR EK   GR+RQF 
Sbjct: 68  TFFDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQKGRYRQFH 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-----DYHIGINNRKILDGILEKIGL 184
           Q  V+  G +    DAE+ M+ A   + +G+        +     + R      L     
Sbjct: 128 QFGVETFGVATPDIDAELIMLTARLWKRMGVDHMVQLELNTLGETDERTEYRNALVAFLN 187

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D L+E        D   +     +++L  +  +              E    +  FL
Sbjct: 188 EHKDALDE--------DSQRRLTTNPLRILDSKIESTQK---------ILENAPKLHDFL 230

Query: 245 SIDL 248
             D 
Sbjct: 231 KEDS 234


>gi|300854352|ref|YP_003779336.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           ljungdahlii DSM 13528]
 gi|300434467|gb|ADK14234.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           ljungdahlii DSM 13528]
          Length = 392

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 83/424 (19%), Positives = 173/424 (40%), Gaps = 39/424 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +  +P G  D    E   + +I + ++ IY   GF  +++P LE+ D       +   P 
Sbjct: 5   KKYIPEGTKDILFNECAEKVKIENILKKIYIQSGFMEVKSPTLEFYDVFN--GENATLPQ 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++ L D+ G+ ++LR D+T P+AR        +V P R      V+R  +   G+  +
Sbjct: 63  EKIYKLIDNQGRILALRADMTTPIARIAGTKLKEVVHPLRLCYTSNVYRVSESLNGKNSE 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q  ++ +G      DAE+ +     L + G+   ++ I + + ++   +++ + L  +
Sbjct: 123 ITQSGIEIIGIEGIGGDAEVIVTGIKALLSCGL--ENFKIELGHAELFKALVDGVNLDYE 180

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           ++           +KL K         L     +N   F + +  + E++  +       
Sbjct: 181 ER-----------EKLRKSINNKNFTALNNILLENKDKFEESSLKSLEELPKLF-----G 224

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + +     L++      K    +  + E+V+  G+    + +   +V  ++YYTG ++
Sbjct: 225 GMEVIERASHLMEDNKRALKALESIKKVYEIVKSIGF-EKYLALDLGMVHNIDYYTGIIF 283

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                             G++  GGRYD L+++F   + PATGF++ +  +I +L+    
Sbjct: 284 RGYT----------HGFGGNILSGGRYDNLIAQFG-DSQPATGFAMDVDGIITSLEENGQ 332

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                     V         +S  K     + LR  GI  E+     ++     KYA+++
Sbjct: 333 LCCEKNTKVLVYY-----GGESFGKAYEKAESLRNQGIVTELSPFRDES--EARKYAEKK 385

Query: 428 NCPL 431
           N   
Sbjct: 386 NMEF 389


>gi|325294226|ref|YP_004280740.1| ATP phosphoribosyltransferase regulatory subunit
           [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325064674|gb|ADY72681.1| ATP phosphoribosyltransferase regulatory subunit
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 422

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 87/443 (19%), Positives = 173/443 (39%), Gaps = 51/443 (11%)

Query: 7   LRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +R  E+P+GF     +E   R RIL  +  +   +G+  +  P +EY  +       ++ 
Sbjct: 1   MRPTEIPKGFKTFLPEEAEKRERILKIMEEVLSLWGYRLLSPPTIEYLSTFKIV---DEN 57

Query: 66  PNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +  F L D   G+ +++R D T  +A+ VA +F     P R +  G +FR      G+
Sbjct: 58  LEEFSFKLVDRFTGKLMAIRPDFTPQVAKIVASSFKDDDPPFRFFYKGKIFR----DAGK 113

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q   + +G S   ADAE+  ++ + LE +G+      IG +  + L+G LE++ +
Sbjct: 114 DREIFQFGFEVIGVSEVEADAEVVSVVVNILEKLGLSSFQIDIGNS--EFLEGALEELKI 171

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                                   +    LL          F +   ++ +    +   L
Sbjct: 172 P---------------------DREEFLKLLSHKDLSGIEIFLEERKISKDTRIKIEKLL 210

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +   + + +    +            L  +  +++  G+   ++    +  RG+EY+ G
Sbjct: 211 ELYGREEVLDSAYQLFENSKSRAALKRLKEMFAILKSYGF-EKKVIFDLSEKRGMEYHKG 269

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E             P+   S+G GGRYDGL+ +F  +N+PATG ++ +  L   L+ 
Sbjct: 270 ITFEVF----------HPLYGFSLGSGGRYDGLMKKFG-RNLPATGVALNVDALQELLEK 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                             +D + + L +     + LR  G +    +   ++  + L+ A
Sbjct: 319 KGLLKVEDSG----DFYIIDLEKE-LHRAYELAKALRKLGYKVARDI-VKRDLKSSLEIA 372

Query: 425 DRRNCPLAIIQGTGERSRGMLQI 447
            ++     I+    E       +
Sbjct: 373 FKKGFKNVIVL-NRENDEHKCTL 394


>gi|150016197|ref|YP_001308451.1| histidine--tRNA ligase [Clostridium beijerinckii NCIMB 8052]
 gi|149902662|gb|ABR33495.1| Histidine--tRNA ligase [Clostridium beijerinckii NCIMB 8052]
          Length = 381

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 82/416 (19%), Positives = 162/416 (38%), Gaps = 45/416 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK      LP G  D    E  ++  +   I  ++E +G+  + TP LE+ ++   + 
Sbjct: 1   MNKKNI----LPEGTRDLVLDECAVKRILEKDIDKLFEKWGYKEVITPTLEFYETF-NYN 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
               R  + ++   D+ G+ + LR D+T P+AR V      +  P +      VFR    
Sbjct: 56  SQTLR-EEDMYKFFDNRGRILILRPDMTIPIARVVETKLKDVELPIKLRYTSNVFRVHAS 114

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G+  ++  C V+ +G   E +D E+ ++  + L+ +G+  ND+ + I N    +G  +
Sbjct: 115 LGGKRNEYTDCGVEFIGLEDEKSDLEILVLALEALKKLGL--NDFKLEIGNIGFFNGAFK 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + +  + K                   + +   + +    +  D+ +  ++  E     
Sbjct: 173 NLEIEQEYK-------------------EAIAQFIEDKNMKSLEDYLENLDIKEEYKAFF 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +  +K + E  + +       K  + L  + + +   GY  N +     +V  L 
Sbjct: 214 NKLPWMFGDKQILEEAKKLAFNEELRKNLDYLEALYQELDLLGYGKN-VTFDLGMVPRLN 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++                V  ++  GGRYD L+   +   VPA GFSI I  +I 
Sbjct: 273 YYTGIIFRGY----------GEGVGNTLLRGGRYDNLIELSEKC-VPAVGFSIDIDAVIP 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
            +K       N        I  + ++ ++  +    ++ LR  G   ++       
Sbjct: 322 TVK------FNKIASEKENIYKIYYNKNTRIEAIKKSEELRNQGYIVDLLPNEDMK 371


>gi|239623816|ref|ZP_04666847.1| ATP phosphoribosyltransferase [Clostridiales bacterium 1_7_47_FAA]
 gi|239521847|gb|EEQ61713.1| ATP phosphoribosyltransferase [Clostridiales bacterium 1_7_47FAA]
          Length = 421

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 78/407 (19%), Positives = 152/407 (37%), Gaps = 41/407 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K +L    P G  D    E R +  + D I N    YG++ I+TP  EY D   K  
Sbjct: 1   MAGKNRL-IHTPEGVRDSYNAECRKKLAVQDKILNTLYLYGYEHIQTPSFEYFDIFSK-- 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 ++ +F   D D   + LR D+T  +AR VA+ F     P R   +   F+N   
Sbjct: 58  DRGSVSDREMFKFFDRDNNTLVLRPDMTPAVARCVAKYFMDDDMPLRLCYLERTFKNNSS 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR ++  +   + +G  +   DAEM  M+ D+L+A G+K     +          +LE
Sbjct: 118 YQGRLKERAEMGAELIGDDSADGDAEMIAMVIDSLKAAGLKEFQVEL--GQVAFYRSLLE 175

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           + G   + +                   + +  L+         +  KG ++      + 
Sbjct: 176 EAGFSEEVE-------------------EELNQLVENKNDFGVAELLKGQDIDEGLKQVF 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +    +            +  +         L  +  +++  G  ++ +     ++    
Sbjct: 217 LKLPELFGSLEQIVQARKLTSSPKALAAIERLEQVHAILQSYG-LADYVSYDLGMLSKYH 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++A                  +  GGRYD L+ +F  ++ PA GF+I + +++ 
Sbjct: 276 YYTGIIFKAYT----------YGTGDYIVTGGRYDKLLVQFG-KDTPAVGFAIVVDQVMA 324

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           AL   +           ++ T + +++ +        +  +  G+  
Sbjct: 325 ALSRQQI-----DTPVTLVNTVILYEAPARDNAIRLGRYFKEKGLAV 366


>gi|310639635|ref|YP_003944393.1| ATP phosphoribosyltransferase regulatory subunit [Paenibacillus
           polymyxa SC2]
 gi|309244585|gb|ADO54152.1| ATP phosphoribosyltransferase regulatory subunit [Paenibacillus
           polymyxa SC2]
          Length = 401

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 89/415 (21%), Positives = 149/415 (35%), Gaps = 45/415 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E+P G  D   + +     I  ++    E +G+  I TP +EY D++G   
Sbjct: 1   MSKPKGF--EIPIGVRDYLPRAVSKLRAIELNVLACMERWGYRQIMTPTMEYYDTVGVAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              DR    +F L ++ G  + LR D+TAP+AR V+        P R      VFR  + 
Sbjct: 59  STSDRK---LFKLLNNRGTTLVLRSDMTAPIARVVSSLLKEEEVPLRLSYHANVFRAIEE 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ VG  +  ADAE+  +   +L+A G+    + I + +   L+G+ E
Sbjct: 116 EAGREAEFFQTGVELVGDDSPEADAEVVALAIASLQAAGVTS--FKIAMGHVGFLNGLFE 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I      +                   Q +K LL            +   L  E  D +
Sbjct: 174 EIIPGRQAEQ------------------QALKELLLNRDVVGYRTAIEALGLAPEHRDKL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            + L +   K + E    +       +    L  + E++   G  S  + I  T++    
Sbjct: 216 EAILRLRGGKEICEQATRLSVEQQTLQTIAHLCEVWEVLEAYGV-SEHVLIDLTMIGDFS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  +E                   V  GGRYD L+ +F      +   +    +   
Sbjct: 275 YYTGMTFEGYAAEIGF----------PVCNGGRYDNLLQQFGR----SVPATGFALKTNR 320

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            +  ++      K         + +D     +       LR  G+     L    
Sbjct: 321 IVDGVDGIAIETKRP-----VLIRYDEQERREALSAAAQLRAEGLNVVTGLTGGP 370


>gi|291557933|emb|CBL35050.1| ATP phosphoribosyltransferase, regulatory subunit [Eubacterium
           siraeum V10Sc8a]
          Length = 406

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 85/424 (20%), Positives = 156/424 (36%), Gaps = 49/424 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E   R    D +R ++  +G+  + TP LE+ D             + +
Sbjct: 8   TPEGTRDLLFDECVARKEAEDKLRAVFTAHGYSEVITPALEFYDVFNNKTRS--FRQEDM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D  G+ + +R D T P+AR VA      VFP + +    ++R      GR  +F+Q
Sbjct: 66  YKLTDGKGRLMVMRPDSTMPIARIVATRLRDGVFPLKLFCSQNIYRCNPKMAGRDDEFMQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+ +G   + +D E   + A  L +     +D  + I +      +LEK+ +  +   
Sbjct: 126 SGVEIIGGDEKRSDLEALSLAAQVLNS--CSSDDVRLEIGDNTFYKLLLEKLDIDDE--- 180

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG----ANLTSEQIDIMVSFLSI 246
                             + V+ L+    T +   F K             +I++    +
Sbjct: 181 ------------------ETVRSLIESKNTPDLTQFIKENVDSNPEKRRYSEILLQLPDL 222

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                + +  E +    A      EL    + +RK     ++I +   +V   EYYTG V
Sbjct: 223 FGGAEVFDKAEKLFAGTALSDRLTELKETFDALRKL-EAEDKITVDLGLVNKAEYYTGIV 281

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +   +               +V  GGRYD L+  F   ++PA GF++ ++ +        
Sbjct: 282 FRGYIEEYGQ----------AVLSGGRYDTLIGSFGADDMPAVGFAVNVNAIAA----AN 327

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY--A 424
             +N   +     +     D D +     +   L + GI AE            ++Y  A
Sbjct: 328 LRSNRSTKARHAEVLVFAADEDLI-DGISHCTKLISKGISAEFSTC--PTLDAAMEYAKA 384

Query: 425 DRRN 428
           ++  
Sbjct: 385 NKIG 388


>gi|253575547|ref|ZP_04852884.1| histidine-tRNA ligase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845194|gb|EES73205.1| histidine-tRNA ligase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 400

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 156/409 (38%), Gaps = 45/409 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D     +     I   + +    +G+  I TP +EY D++G   
Sbjct: 1   MSKPKGF--EKPAGVRDYLPFAVDKLRAIERRVLDCMAGWGYRQIMTPTMEYYDTVGVAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   + +F L ++ G  + LR D+TAP+AR VA        P R      VFR  + 
Sbjct: 59  STSD---QKLFKLLNNRGTTMVLRSDMTAPIARVVASLLKEEPLPLRLSYHANVFRAIEE 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ VG  +  ADAE+  +   +L+A G+K   + I + +   L+G+LE
Sbjct: 116 EAGREAEFYQTGVELVGDDSPDADAEVIALAVASLQAAGVKS--FKIAVGHVGFLNGLLE 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 +D                    + +K  L         +     +L+ EQ D +
Sbjct: 174 DAVPGREDIQ------------------EALKAGLLHRDFVGYRETLSQLSLSQEQRDEL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L +   K +      +      +     L  + + +   G     + I  T++    
Sbjct: 216 EGILRLRGGKEICGQALELSRNPLAQSSVQHLSQVWDALEDFGVAE-HVMIDLTMIGDFS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  +E                   V  GGRYD L+ +F  +  PATGFS+  +R++ 
Sbjct: 275 YYTGMTFEGYAAELGF----------PVCSGGRYDNLLQQFG-RPAPATGFSLKTNRILD 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
            +  LE+               + +D  +  +     + LR+ G    M
Sbjct: 324 GVGGLETEPELP--------VVLQYDVPNRKRAFAEAERLRSEGCSVLM 364


>gi|238924047|ref|YP_002937563.1| histidine--tRNA ligase [Eubacterium rectale ATCC 33656]
 gi|238875722|gb|ACR75429.1| histidine--tRNA ligase [Eubacterium rectale ATCC 33656]
          Length = 415

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 81/409 (19%), Positives = 158/409 (38%), Gaps = 41/409 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E + +  + D +      YG+  I TP  E+ +  G  +     P+K +
Sbjct: 27  TPDGVRDIYNGECKKKLYLQDKLHRTLLKYGYHDIMTPTFEFFNIFGSDVGTT--PSKDL 84

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D +G  + LR D T  +AR  A+ +     P +   +G  F N     GR ++  Q
Sbjct: 85  YKFFDKEGNTLVLRPDFTPSIARSAAKYYIEDDMPVKLCYLGNTFINSSDYQGRLKESTQ 144

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
           C  + +G  + +ADAE+  M  +++   G+K  ++ I + + +   G+ +  GL G+ + 
Sbjct: 145 CGAELIGDGSISADAEILSMTVESMLESGLK--NFQISVGHSQFFYGLTKAAGLSGEQE- 201

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                             + +K L+         +F    ++  +   +     + DL+ 
Sbjct: 202 ------------------ENLKELIANKNFFGVEEFVDSLSMNDKLRKLFGLLDNFDLQD 243

Query: 251 S-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E  +L +G        + L+ + E ++  G     I     ++    YYTG +++ 
Sbjct: 244 EQLMEALKLAEGYDEILSSIDTLLKLREYLKAYGI-EKYISYELGLISDYTYYTGIIFQG 302

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYD L+S F  ++  A GF+I + +L+ AL   +   
Sbjct: 303 YT----------YGTGEPIVKGGRYDKLLSHFG-KDAAAIGFAIVVDQLMAALSRQDIDV 351

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
             I+         +  +  +       +  LR  G+  +M L       
Sbjct: 352 PVIENSS-----LIVFEEAAYHAAIKRSMELRRDGVNTQMVLKDKNKTK 395


>gi|147790110|emb|CAN61029.1| hypothetical protein VITISV_003968 [Vitis vinifera]
          Length = 229

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 2/147 (1%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+    PRG  D P +++R+RN + +  R +  ++GF+ ++ P+LE      +   +E 
Sbjct: 84  QKIDVNPPRGTRDFPPEDMRLRNWLFNHFREVSRSFGFEEVDFPVLESEALFIRKAGEEI 143

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           R    ++  +D   + ++LR +LT  LAR V +   ++  P + + +G  +R E+   GR
Sbjct: 144 RD--QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGR 201

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMM 151
            R+  Q ++D +G           M+ 
Sbjct: 202 RREHYQWNMDIIGVPEVMMFDGTXMIW 228


>gi|153810161|ref|ZP_01962829.1| hypothetical protein RUMOBE_00542 [Ruminococcus obeum ATCC 29174]
 gi|149833340|gb|EDM88421.1| hypothetical protein RUMOBE_00542 [Ruminococcus obeum ATCC 29174]
          Length = 416

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 119/431 (27%), Positives = 187/431 (43%), Gaps = 47/431 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   KE+ IRN +++ IR  Y  +GF  IETP +E+ ++L      E+  
Sbjct: 3   LKKKPVTGMKDILPKEMEIRNYVMNMIRETYGKFGFSAIETPCVEHIENLSSKQGGEN-- 60

Query: 67  NKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY + N   +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLKLDTAECEADLVDSGLRYDLTVPLSRYYSNNAGQLPTPFKALQMGN 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+ M     L  +    +++ I IN+RK
Sbjct: 121 VWRADRPQRGRFRQFMQCDIDILGEPTYLAEIELVMATTTLLGKLDF--HNFTIRINDRK 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL  + +  G            V   +DK+DK GL+GV   L +               +
Sbjct: 179 ILKAMAQYSGFPE----GSFDTVFIILDKMDKIGLEGVAEELEKE------------GFS 222

Query: 234 SEQIDI-MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
            + IDI +  F  I  +       +     +   K   +L  I   V        +I   
Sbjct: 223 KDSIDIYLGMFKEITTDIEGVRYCKEKLSDVLDPKVAEDLETIITAVDSVKNADFKISFD 282

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQN  A GFS
Sbjct: 283 PTLVRGMSYYTGPIFEI----------AMDEFGGSVGGGGRYDEMIGKFTGQNTSACGFS 332

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-L 411
           IG  R+++ L               V +   +  +D L       +  R  G++  +  +
Sbjct: 333 IGFERIVMLLLERG-YEIPTNAAKKVYLIEKNMPADKLLPILKQAEEERKNGVQINISIM 391

Query: 412 GSSKNFGN-QL 421
             +K F   Q+
Sbjct: 392 KKNKKFQKEQM 402


>gi|291561453|emb|CBL40252.1| histidyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 421

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 111/429 (25%), Positives = 184/429 (42%), Gaps = 47/429 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E++IR+ +L+ I+  Y  +GF  IETP +E+ ++L      ++  
Sbjct: 3   LKKKPVTGMKDILPAEMQIRDYVLNQIKETYRGFGFSAIETPCVEHIENLLSKQGGDN-- 60

Query: 67  NKGVFSLQDDD----------GQWIS---LRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +                 ++   LRYDLT PL+RY + N   +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLNIETAETENDLADGGLRYDLTLPLSRYYSNNSANLPSPFKALQVGS 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G +   A+ E+ +     L+ +    N + + +N+RK
Sbjct: 121 VWRADRPQKGRFRQFVQCDIDILGDATNQAEIELILATTTALKKI-CPDNSFEVRVNDRK 179

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +L  +    G   +D       V   +DK+DK G  GVK  L E               +
Sbjct: 180 LLRAMAVYSGFPEED----IDKVFITVDKMDKIGTDGVKAELMEN------------GYS 223

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E  D  +  +      +  +  + E++ G +        L  I E V      S ++  
Sbjct: 224 EETADKYLELMGQATNDASGVRRMGEILAGVLEDGAA-ENLAQIMETVGDVSDGSFKLAF 282

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSV GGGRYD ++ +F G + PA GF
Sbjct: 283 DPTLVRGMGYYTGTIFEV----------SMEGFGGSVAGGGRYDKMIGKFTGMDTPACGF 332

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF- 410
           SIG  R++  L      T          +      S+ L+         R  G    +  
Sbjct: 333 SIGFERIVTILLD-NGFTVPGGNEKEAWLFEKGMSSEKLASIMKEAMTARKEGKIVLVAQ 391

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 392 MNKNKKFQK 400


>gi|291528896|emb|CBK94482.1| ATP phosphoribosyltransferase regulatory subunit [Eubacterium
           rectale M104/1]
          Length = 396

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 83/409 (20%), Positives = 159/409 (38%), Gaps = 41/409 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E + +  + D +      YG+  I TP  E+ +  G  +     P+K +
Sbjct: 8   TPDGVRDIYNGECKKKLYLQDKLHRTLLKYGYHDIMTPTFEFFNIFGSDVGTT--PSKDL 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D +G  + LR D T  +AR  A+ +     P +   +G  F N     GR ++  Q
Sbjct: 66  YKLFDKEGNTLVLRPDFTPSIARSAAKYYIEDDMPVKLCYLGNTFINSSDYQGRLKESTQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
           C  + +G  + +ADAE+  M  +++   G+K  ++ I + + +   G+ +  GL G+ + 
Sbjct: 126 CGAELIGDGSISADAEILSMTVESMLESGLK--NFQISVGHSQFFYGLTKAAGLSGEQE- 182

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                             + +K L+         +F    ++  +   +     + DL+ 
Sbjct: 183 ------------------ENLKELIANKNFFGVEEFVDSLSMNDKLRKLFGLLDNFDLQD 224

Query: 251 S-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E  +L KG        + L+ + E ++  G     I     ++    YYTG +++ 
Sbjct: 225 EQLMEALKLAKGYDEILSSIDTLLKLREYLKAYGI-EKYISYELGLISDYTYYTGIIFQG 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYD L+S F  ++  A GF+I + +L+ AL   +   
Sbjct: 284 YT----------YGTGEPIVKGGRYDKLLSHFG-KDAAAIGFAIVVDQLMAALSRQDIDV 332

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
             I+         +  +  +       +  LR  G+  +M L       
Sbjct: 333 PVIENSS-----LIVFEEAAYHAAIKRSMELRRDGVNTQMVLKDKNKTK 376


>gi|154504963|ref|ZP_02041701.1| hypothetical protein RUMGNA_02473 [Ruminococcus gnavus ATCC 29149]
 gi|153794846|gb|EDN77266.1| hypothetical protein RUMGNA_02473 [Ruminococcus gnavus ATCC 29149]
          Length = 422

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 84/397 (21%), Positives = 150/397 (37%), Gaps = 41/397 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +   P G  D  + E R +  + D +  +   YG+  I+TP  EY D   K +      +
Sbjct: 4   KLHTPEGVRDIYSNECRAKLAVQDKLHQVLHLYGYQDIQTPTFEYFDVFRKEIG--TISS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++   D +G  ++LR D+T  +AR  A  F+T  FP R   +G  F N     GR ++
Sbjct: 62  RELYKFFDREGDTLALRPDITPSIARAAATLFETEDFPIRLCYVGSTFINHSSYQGRLKE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q   + +G  +  ADAEM  M+ D L+ VG+K     + I +   L  ++E  GL  +
Sbjct: 122 STQLGAELIGIDSVEADAEMIAMVVDGLKKVGLKEFQ--VNIGHVDFLQSLMEATGLSKE 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +                   + +  L+         +  + A+ + E  +         
Sbjct: 180 QQ-------------------EEIYNLIANRNFFGVEELLEQADASPELKETFRLLPEFA 220

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +  + +       T   ++    L+ I +L+   G   + +    ++     YYTG V+
Sbjct: 221 GDVDVLKKAVEHAPTDQAKQAVGRLLKIYKLLALYG-ADDYVTFDLSMSGHYGYYTGIVF 279

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 ++  GGRYD L+ +F  +  P+ GF+I I  L  AL   + 
Sbjct: 280 RAYT----------YGTGDAIVTGGRYDHLLEKFG-KQTPSIGFAIIIDELQNALSRQKI 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           +         V          +        +  R  G
Sbjct: 329 TVETGHNNLIVY------TDATEKWAIALAKDFREKG 359


>gi|225386910|ref|ZP_03756674.1| hypothetical protein CLOSTASPAR_00658 [Clostridium asparagiforme
           DSM 15981]
 gi|225046922|gb|EEG57168.1| hypothetical protein CLOSTASPAR_00658 [Clostridium asparagiforme
           DSM 15981]
          Length = 421

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 115/438 (26%), Positives = 187/438 (42%), Gaps = 48/438 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M    K       G  D    E++IR  +++ IR  Y+++GF  IETP +E+  +L    
Sbjct: 1   MALTKKPVT----GMKDIQPAEMQIREYVMNQIRETYKSFGFSQIETPCVEHIANLTSKQ 56

Query: 61  PDEDRPNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCR 107
             ++   K +F +     +                LRYDLT PL+RY A N   +  P +
Sbjct: 57  GGDN--EKLIFKILKRGEKLNLDAVNEENDLVDSGLRYDLTLPLSRYYANNAANLPKPFK 114

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
             ++G V+R ++   GRFRQF+QCD+D +G     A+ E+ +     L  +    N + +
Sbjct: 115 ALQMGSVWRADRPQKGRFRQFVQCDIDILGDPTSLAEIELILATTTALGRI-CPDNAFTV 173

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            IN+R IL G+    G   +        V   +DK+DK G +GV+  L E          
Sbjct: 174 RINDRGILKGMALHCGFPEES----MDQVFIILDKMDKIGFEGVERELLESGY------- 222

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
             A  +  Q   ++  ++ D +       +L     A  +    L  I + V +      
Sbjct: 223 --AGTSVSQYMELLRGVAKDADGVRRLGGQLADVLPA--QVSENLAHIMDTVNEVAEADF 278

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
            ++   T+VRG+ YYTG ++E                 GSV GGGRYD ++ +F G   P
Sbjct: 279 GLEFDPTLVRGMSYYTGTIFEI----------SMEGFGGSVAGGGRYDKMIGKFTGMETP 328

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           A GFSIG  R++  L      T   +      +   + DS +L+         R  G++ 
Sbjct: 329 ACGFSIGFERIVTILLD-NGFTVPGEGEKVAYLFEKNVDSAALAAVIREAMEARKNGVQV 387

Query: 408 EMF-LGSSKNFGN-QLKY 423
            +  +  +K F   QL+ 
Sbjct: 388 LVAQMNKNKKFQKEQLEK 405


>gi|168187677|ref|ZP_02622312.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum C str. Eklund]
 gi|169294439|gb|EDS76572.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum C str. Eklund]
          Length = 409

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 94/437 (21%), Positives = 186/437 (42%), Gaps = 44/437 (10%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
           +KLR   P G  D   KE   +  +   +R +Y+  GF  I +P LE+ D       ++ 
Sbjct: 2   SKLRKYTPNGMRDILFKECEEKLYVEKQLRKLYKLNGFSEIISPTLEFYDVFN--FENQP 59

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              + ++ L D +G+ + L+ D+T P+AR VA   +   +P + Y    VFR  ++  G+
Sbjct: 60  IAQEKMYKLFDRNGRILVLKPDMTMPIARIVATKVNYKNYPLKFYYTSNVFRINENLNGK 119

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             +  Q  ++ +G     AD+E+ +   ++L  +GIK  ++ I +   K    I++   +
Sbjct: 120 TSEITQSGIEIIGIKNIKADSEVVITAIESLLELGIK--NFKIELGQSKFFKEIIKNQNI 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT--KGANLTSEQIDIMVS 242
           + +D                      ++ L+         ++   + A +  + I+I+  
Sbjct: 178 NEEDIFI-------------------LRTLIENKNYTALEEYLKKRKAIIKEDTINILEQ 218

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
              +  + S+    + +       K  +E++ + +++ K G +   + I   +++ ++YY
Sbjct: 219 LPKMFGDISVVYKAKNLVNDSEQVKALDEILNLYKIIDKVGLSK-YLSIDLRMIQDIDYY 277

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           TG +++  +            V   +  GGRYD L+  F   N+P+TGF I I  +I AL
Sbjct: 278 TGVIFKGYVE----------GVGDYILSGGRYDNLIGNFGC-NLPSTGFGINIDNIIEAL 326

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K  E    +      +       + D L K      +++   I  EM L    +  + +K
Sbjct: 327 KMYEILDIDKPRRAILYC-----EDDYLDKAYKIIDLVQKNEIICEMSLRD--SIEDTIK 379

Query: 423 YADRRNCPLAIIQGTGE 439
           YA  +    AI+    E
Sbjct: 380 YAKYKCIDKAILINHEE 396


>gi|297583399|ref|YP_003699179.1| histidyl-tRNA synthetase 2 [Bacillus selenitireducens MLS10]
 gi|297141856|gb|ADH98613.1| histidyl-tRNA synthetase 2 [Bacillus selenitireducens MLS10]
          Length = 395

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 89/409 (21%), Positives = 165/409 (40%), Gaps = 46/409 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D   +   ++ ++ ++I      +G++ I TP LE+ +++G+  
Sbjct: 1   MSK--LFMFEKPLGMRDTLPELFELKRKLRNAIGLEVTRWGYEQIATPTLEFYETVGQSS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 ++ +F L D +G  + LR D+TAP+AR  A    +   P R     PVFR ++ 
Sbjct: 59  A---ILDQQLFKLLDQEGNTLVLRPDMTAPIARIAASTLRSGQRPLRLTYDAPVFRAQQR 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q   + +G  + +ADAE+  +MA +++  G+      + I +   ++ +L 
Sbjct: 116 EGGRPAEFEQIGCELIGDGSSSADAEIIALMAASMKEAGLSGYQ--VAIGHIGFVNALLS 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++  + +                        +  L E              L+      +
Sbjct: 174 EVLGNEERTAV-------------------FRRYLYEKNYVGFRKAVNDLPLSGIDKQRL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L +     +    + +  +  G+    EL  +  ++ + G N N+I +   +V  + 
Sbjct: 215 TGLLKLKGTSDVLSEADTLVSSPEGKAALKELRDLVGILEQYGLN-NQITLDLNLVMHMS 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+EA              +   VG GGRYD L+ +F+    PATGF + + RL  
Sbjct: 274 YYTGVVFEAYSQ----------GLGSPVGSGGRYDSLLDQFEHPE-PATGFGLRLDRLTE 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           AL     +          ++ + +   ++L          R  G R  M
Sbjct: 323 AL----GTKTPQVSQDLCIVYSANRRIEALDTAVKE----RGNGRRVVM 363


>gi|219667542|ref|YP_002457977.1| histidine--tRNA ligase [Desulfitobacterium hafniense DCB-2]
 gi|254801982|sp|B8FP16|HISZ_DESHD RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|219537802|gb|ACL19541.1| Histidine--tRNA ligase [Desulfitobacterium hafniense DCB-2]
          Length = 383

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 97/433 (22%), Positives = 164/433 (37%), Gaps = 64/433 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             +P G  D    E+ ++ R   S  ++++ + +  + TP LEY   +     +ED    
Sbjct: 8   LRIPEGMHDLLPDELALQERAEASALDLFKAWAYQKVVTPTLEYGACIQPVEEEEDSF-- 65

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             F L D  G  + LR +LT P+AR V+       FP R      VFR  K     FR  
Sbjct: 66  --FKLFDRQGHVLVLRPELTTPIARMVSTRMRGTTFPLRLCYAADVFRYSKSHKQEFR-- 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +GS++  ADAE+  +  + L  +G    D+ I + +  I  GI+ ++G+  + 
Sbjct: 122 -QVGVELIGSASPAADAEVVALAIEALRQIGGM--DFQINLGHMGIFTGIMAELGVPQEF 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L+ +                     L            K      +  D+++    +  
Sbjct: 179 QLHYQ-------------------EKLARKDFVGIERLVKDYGFELKVQDVLLKLPHLHG 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++ M +         +  +    L  +   ++  G   + + +   I+RG  YYTG V+E
Sbjct: 220 QEDMLDQVLEWSRRPSLLEAVAALRQVYRYLKDFGV-QDYVSLDLGILRGFSYYTGAVFE 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +          P V   V  GGRYD L   F  ++VPATGF+I +  +I  +      
Sbjct: 279 GYV----------PGVGFPVVEGGRYDALYGEFG-EDVPATGFAINLKAIIEQM------ 321

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY----- 423
                      +     D   +S+     + LR  G R EM L         L       
Sbjct: 322 --ACSNAESPEVFVCGSD---VSQVIAEARKLRQTGKRVEMCLEP-------LTREQAVA 369

Query: 424 -ADRRNCPLAIIQ 435
            ADR+     +  
Sbjct: 370 SADRKGIKEIVCV 382


>gi|227498548|ref|ZP_03928692.1| ATP phosphoribosyltransferase regulatory subunit [Acidaminococcus
           sp. D21]
 gi|226904004|gb|EEH89922.1| ATP phosphoribosyltransferase regulatory subunit [Acidaminococcus
           sp. D21]
          Length = 390

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 92/399 (23%), Positives = 166/399 (41%), Gaps = 42/399 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            ++P G  D    E R++  + D +   + ++G+D   TP  EY+D+        D P++
Sbjct: 6   LQIPYGTKDILPGEARVKREMEDRLARNFLSWGYDEAMTPTFEYADTFALSGA--DLPDE 63

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +      D +   LR ++T PLAR V           R + I  VFR+E+   GR  +F
Sbjct: 64  SM-KFLGRDNRTFMLRSEMTTPLARMVVTRMRQDEGIKRLFYIANVFRHEETQAGRQCEF 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+  G     ADAE+  +  ++L+A G+    + I I +   L G++E   L    
Sbjct: 123 RQAGVEFFGEKGPEADAEVLALAVESLKAAGL--AHFTISIGHSGFLAGLIEDAELSDAQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                      +++L K  L    + L +  +  S +  +         +++   L    
Sbjct: 181 -----------VERLKKMILTHNAVALEKAASVISYEPVR---------ELVKGLLYQQG 220

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              + +  +         +  + L+ I  L    G  +++I    +++R  +YYTG V+E
Sbjct: 221 GPDLLQALKTKVTHPRSLEALDNLLAIYHLCEAYGV-TDKIVFDLSLIRNFDYYTGMVFE 279

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A       N          + GGGRYD ++ RF  + +PATGF++G+ R+I+AL+   + 
Sbjct: 280 AYGPQIGFN----------ICGGGRYDSMMERFG-KAMPATGFALGVDRIILALRREGAL 328

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                    V        +   +K  +    LR  G + 
Sbjct: 329 QGKEAWDDYV-----AFSAKGETKAIIKAMTLRCKGRKV 362


>gi|138896664|ref|YP_001127117.1| ATP phosphoribosyltransferase regulatory subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|166219830|sp|A4ISR8|HISZ_GEOTN RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|134268177|gb|ABO68372.1| ATP phosphoribosyltransferase regulatory subunit/histidyl-tRNA
           synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 394

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 93/414 (22%), Positives = 168/414 (40%), Gaps = 46/414 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+  +  E P G  D       ++ ++  ++    E +G++ IETP LEY +++G   
Sbjct: 1   MAKRLFM-FEKPLGMRDTLPFLYEMKKQVRRTMAEEIERWGYEFIETPTLEYYETVGTAS 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D     +F L D  G  + LR D+TAP+AR  A        P R      VFR ++ 
Sbjct: 60  AIADH---RLFKLLDQQGHTLVLRPDMTAPIARVAASRLYEDSNPLRLAYNANVFRAQQR 116

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G     ADAE+  +MA  L+ VG+    + + + +   ++ +  
Sbjct: 117 EGGRPAEFEQIGVELIGDGTVMADAEVISLMAALLKRVGLS--HFSVAVGHIGYVNALFL 174

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I  + +                       ++  L E       +  K   L+S     +
Sbjct: 175 EILGNEERASV-------------------LRRFLYEKNYVGYREHVKSLPLSSIDQKRL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  LS+       E  + +  +  G++  +EL  +   ++  G  S  +K+   +V  + 
Sbjct: 216 LDLLSLRGGSEAIEAAKALVTSEEGQRAADELAALLAALKTYGV-SEAVKLDMALVSHMS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++E                   +G GGRYD L+++F  +  PATGF + + RLI 
Sbjct: 275 YYTGILFEVYAEQVGF----------PIGNGGRYDDLLAKFS-RPAPATGFGLRVDRLIE 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           A+   +             I  +    + L++     +  R  G R  +   + 
Sbjct: 324 AIGETDVRG---------EIECIVFSQERLAEAVELAEAKRAEGQRVVLQHITG 368


>gi|56964814|ref|YP_176545.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus clausii
           KSM-K16]
 gi|81365481|sp|Q5WDH6|HISZ_BACSK RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|56911057|dbj|BAD65584.1| histidyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 393

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 87/409 (21%), Positives = 171/409 (41%), Gaps = 47/409 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +      E P G  D       ++ ++ D +   +  +G++ ++TP LEY +++GK  
Sbjct: 1   MSEP--FMFEKPLGMRDVLPNLHSMQRKLGDRVLQEFRLWGYEQVQTPTLEYYETVGKAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   K +F L D  G  + LR D+TAP+AR V+ +   I +P R      ++R  + 
Sbjct: 59  AISD---KQLFKLIDFHGNTLVLRPDMTAPIARLVSSSMKDIPYPLRLSYCSSLYRALQT 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ VG    +AD EM +++   L   G+  + + + + +   L+ +  
Sbjct: 116 EGGRPAEFAQVGVELVGDHTASADGEMLLLLNRALIQAGL--DHFQVAVGHIGFLNALFL 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I    +                     + ++  L E       +  K   L+S     +
Sbjct: 174 EIFGTVERA-------------------ELLRRQLYEKNDVGFKEQVKAFGLSSIDEKKL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +    +   +++    E +  +  G++   EL  + + +++ G     +K+  ++V  + 
Sbjct: 215 LKLSRLRGNEAILAEAEQLTESAEGKQAVAELRDLWQGLKEGGLTR-YMKLDLSLVLHMS 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTGC++E               +   +GGGGRYD L+++F  +  PATGF + +  L  
Sbjct: 274 YYTGCIFEVY----------HDRLPRPLGGGGRYDHLLAKFG-RPGPATGFGLRLDLLAE 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           A+  LE                + +  +   +       LR  G++  +
Sbjct: 323 AVGKLEVQPKKRC---------LLYSRERRQEAYRKATALREKGMQVVL 362


>gi|295108482|emb|CBL22435.1| histidyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 416

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 116/430 (26%), Positives = 185/430 (43%), Gaps = 45/430 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   KE+ IRN +++ IR  Y  +GF  IETP +E+ ++L      E+  
Sbjct: 3   LKKKPVTGMKDILPKEMEIRNYVMNMIRETYGKFGFSAIETPCVEHIENLSSKQGGEN-- 60

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY + N   +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLKLDTAECEADLVDSGLRYDLTVPLSRYYSNNSGQLPAPFKALQMGN 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+ M     L  +     ++ I IN+RK
Sbjct: 121 VWRADRPQRGRFRQFMQCDIDILGEPTYLAEIELVMATTTLLGKLDFH--NFTIRINDRK 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL  + +  G   +        V   +DK+DK GL+GV   L +         T    + 
Sbjct: 179 ILKAMAQYSGFPEES----FDTVFIILDKMDKIGLEGVAEELEKEGFKKDSIDTY-LGMF 233

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            E    +         + +    E +K  +  +    +L  I   V        +I    
Sbjct: 234 KEITSDI---------EGVRYCREKLKDVLDPKVA-EDLETIITAVDSVKNADFKISFDP 283

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQN  A GFSI
Sbjct: 284 TLVRGMSYYTGPIFEI----------AMDEFGGSVGGGGRYDEMIGKFTGQNTSACGFSI 333

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LG 412
           G  R+++ L                 +   +  +D L       +  R  G++  +  + 
Sbjct: 334 GFERIVMLLLERG-YEIPENGAKKAYLIEKNMPADKLLPILKQAEEERKNGVQVNISIMK 392

Query: 413 SSKNFGN-QL 421
            +K F   Q+
Sbjct: 393 KNKKFQKEQM 402


>gi|218246201|ref|YP_002371572.1| ATP phosphoribosyltransferase regulatory subunit [Cyanothece sp.
           PCC 8801]
 gi|226702199|sp|B7K4F1|HISZ_CYAP8 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|218166679|gb|ACK65416.1| histidyl-tRNA synthetase 2 [Cyanothece sp. PCC 8801]
          Length = 407

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 87/412 (21%), Positives = 163/412 (39%), Gaps = 44/412 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I D ++ ++  +G+  I T  +E+ ++L          
Sbjct: 1   MIHQPPAGARDLLPLEVVQKAWINDRLQQVFGGWGYQRIVTSTIEWLETLMAGGA---IQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG-RF 125
           +  V  LQD+    + LR +LTA +AR          +P R      VFRN   G   + 
Sbjct: 58  HSTVIQLQDNSAGQLGLRPELTASIARAAVTRMADTTYPQRLCYRANVFRNPPSGHHGKQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  V+ + +    ADAE+ +++AD LE +G     + + I    +   +L      
Sbjct: 118 LEFYQAGVELLFAGGILADAEILLLVADCLEQLG--IPQWQLLIGEAGVTRSLLSPFPDP 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++   L  L             V L   +  + +  +  +           ++  L 
Sbjct: 176 LKSQVCHCLAQLDY-----------VTLENLDYPSSHLKERAQ-----------LLFDLR 213

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +  + + ++ + ++   AGE+  N L  +  L+  S      + +  ++++  +YYTG 
Sbjct: 214 GNATEVLEKVAK-LELDKAGEESINNLKSLMRLINDSRSKPLPLTLDLSVIQTFDYYTGI 272

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
           V++A+         +       +G GGRYD L  V   KGQ+ P  GFS  +  L   L 
Sbjct: 273 VFKAV--------GKTDNQLHILGQGGRYDQLLGVYHPKGQSAPGIGFSFNVEDLYACLL 324

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGS 413
           +          +       +    ++ S    Y Q LR +G  +R  + LG 
Sbjct: 325 NTSILPQLAPSIDW---LIIPQTDEARSTAFQYAQNLRDSGKNLRVAIDLGG 373


>gi|331090641|ref|ZP_08339492.1| hypothetical protein HMPREF9477_00135 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330401081|gb|EGG80676.1| hypothetical protein HMPREF9477_00135 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 418

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 117/436 (26%), Positives = 185/436 (42%), Gaps = 54/436 (12%)

Query: 1   MG-KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M  KK  +      G  D   +E+ IR+ ++  I+  Y  +GF  IETP +E+ ++L   
Sbjct: 1   MALKKKAMT-----GMKDMLPREMEIRDYVIHLIKETYSTFGFSSIETPCVEHIENLCSK 55

Query: 60  LPDEDRPNKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPC 106
              E+   K +F +     +                LRYDLT PL RY A   + +  P 
Sbjct: 56  QGGEN--EKLIFKILKRGEKLKLETAQTESDVVDGGLRYDLTVPLCRYYANASNELPSPF 113

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
           +  ++G V+R ++   GRFRQF+QCD+D +G     A+ E+ +     L  +  K  ++ 
Sbjct: 114 KALQMGNVWRADRPQRGRFRQFMQCDIDILGEPTNLAEIELILATTTLLGKLDFK--NFT 171

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I IN+RKIL  +    G    D       V   +DK+DK GL GV   L           
Sbjct: 172 IRINDRKILKAMASYSGFEEKD----YDNVFIILDKMDKIGLDGVAAELEAN-------- 219

Query: 227 TKGANLTSEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                   E +D  ++      +  + +    E + G +  E   + L +I   V     
Sbjct: 220 ----GYAKESVDKYLALFKEITNDVEGVRYCKEKLAGFLDAETA-DGLEMIITSVDSVKE 274

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
              +I    T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQ
Sbjct: 275 AEFKISFDPTLVRGMSYYTGTIFEI----------AMDEFGGSVGGGGRYDEMIGKFTGQ 324

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             PA GFSIG  R+++ L           +     +     + + L K     +  R AG
Sbjct: 325 QTPACGFSIGFERIVMLLLERG-YEVPTAKNKKAFLIEKGMNQEGLLKVLSLAKEERAAG 383

Query: 405 IRAEMF-LGSSKNFGN 419
            + ++  +  +K F  
Sbjct: 384 NQVQISVMKKNKKFQK 399


>gi|251778610|ref|ZP_04821530.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243082925|gb|EES48815.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 382

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 87/413 (21%), Positives = 170/413 (41%), Gaps = 44/413 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK      LP G  D    E  I+  +  SI +++ N+G+  + TP LE+ ++   + 
Sbjct: 1   MNKKNI----LPEGTRDLVLNECEIKRHLEKSIDDLFSNWGYREVITPTLEFYETF-NYY 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           P+  +  + V+   D+ G+ + LR D+T P+AR V+        P R   I  VFR  + 
Sbjct: 56  PESLK-EEEVYKFFDNKGRILVLRPDMTIPIARLVSTKLKGEALPIRIRYISKVFRVHES 114

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  ++  C ++ VGS     D E+ ++  ++L+ +G+K  ++ + I N +  +    
Sbjct: 115 LGGRRNEYTDCGIELVGSEGIDKDLEILVLALESLKKMGLK--NFKLEIGNIEFFNSAFN 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + +  ++K                   + +  L+      N  +F K  ++  E     
Sbjct: 173 DLNISSENK-------------------ENIAKLIEGKNLKNLENFLKSLDIKEEYRKFF 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +   + + E  + +       KG + L  +   + + GY  + I     +V  L 
Sbjct: 214 NKLPWMFGNRKVLEEGKKLAFNKDLLKGISYLEELYVQLEELGY-KDNITFDLGMVPKLN 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++                   S+  GGRY+ L+  +   ++PA GFSI +   +V
Sbjct: 273 YYTGIIFRGYGEDIG----------DSILAGGRYNKLIKSYG-VDLPAIGFSIDV--DLV 319

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
            + +++++    K          + D   + +    ++ LR  G   E+F   
Sbjct: 320 VINNIDNNETIQKNRDLYKFFYGNKD---MVQAIKESEELRKQGKVVELFYDE 369


>gi|229084500|ref|ZP_04216775.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock3-44]
 gi|228698790|gb|EEL51500.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock3-44]
          Length = 420

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 83/433 (19%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PDGTRDYVFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D  G+ I LR D+T PLAR             +    G VFR  + 
Sbjct: 56  RNRPIDEEKMYKFFDQQGRIIVLRPDMTIPLAR--VMGTLREDLALKLTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + IQ  ++ +G     A+ E  +     L+AVGI+   + I +   ++   I++
Sbjct: 114 LSGKYNEIIQTGIEIIGIDNIRAEIECIVSAIHALQAVGIQS--FTIELGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+    +++   R  +           LQ                  K  + + E + ++
Sbjct: 172 KLSFGEEEESLLRTYIESKNYAELSRFLQE-----------------KNLDRSDETVQLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +      ++    +  I + + K GY S  I I   +++ L 
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASNHEMKQAIARIKEIYKTIEKLGYGS-YISIDLGMIQHLH 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++   +              G +  GGRYD L+S F  + +PA G ++ +++++ 
Sbjct: 274 YYTGVIFRGYIYDVG----------GEIVSGGRYDELLSNFG-EPMPAVGLAVQVNQIVR 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+  + + N  K    +  +      D +++ +    +L+  G + E+ +    N  + 
Sbjct: 323 TLQEQQKTFNRKKLDMIIHYSL-----DMIAEAERLCGLLQKDGWKVELSMFE--NLQDT 375

Query: 421 LKYADRRNCPLAI 433
             +A +      I
Sbjct: 376 FYFAKKNGIIKVI 388


>gi|257059249|ref|YP_003137137.1| ATP phosphoribosyltransferase regulatory subunit [Cyanothece sp.
           PCC 8802]
 gi|256589415|gb|ACV00302.1| histidyl-tRNA synthetase 2 [Cyanothece sp. PCC 8802]
          Length = 407

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 88/412 (21%), Positives = 164/412 (39%), Gaps = 44/412 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I D ++ ++  +G+  I T  +E+ ++L          
Sbjct: 1   MIHQPPAGARDLLPLEVVQKAWINDRLQQVFGGWGYQRIVTSTIEWLETLMAGGA---IQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG-RF 125
           +  V  LQD+    + LR +LTA +AR          +P R      VFRN   G   + 
Sbjct: 58  HSTVIQLQDNSAGQLGLRPELTASIARAAVTRMADTTYPQRLCYRANVFRNPPSGHHGKQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  V+ + +    ADAE+ +++AD LE +G     + + I    +   +L      
Sbjct: 118 LEFYQAGVELLFAGGILADAEILLLVADCLEQLG--IPQWQLLIGEAGVTRSLLSPFPDP 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++   L  L             V L   +  + +  +  +           ++  L 
Sbjct: 176 LKSQVCHCLAQLDY-----------VTLENLDYPSSHLKERAQ-----------LLFDLR 213

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +  + + ++ + ++   AGE+  N L  +  L+  S      + +  ++++  +YYTG 
Sbjct: 214 GNATEVLEKVAK-LELDKAGEESINNLKSLMRLINDSRSKPLPLTLDLSVIQTFDYYTGI 272

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
           V++A+         +       +G GGRYD L  V   KGQ+ P  GFS  +  L   L 
Sbjct: 273 VFKAV--------GKTDNQLHILGQGGRYDQLLGVYHPKGQSAPGIGFSFNVEDLYACLL 324

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGS 413
           +          +       +   S++ S    Y Q LR +G  +R  + LG 
Sbjct: 325 NTSILPQIAPSIDW---LIIPQTSEARSTALSYAQNLRDSGKNLRVAIDLGG 373


>gi|325263983|ref|ZP_08130716.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium sp.
           D5]
 gi|324031021|gb|EGB92303.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium sp.
           D5]
          Length = 416

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 84/403 (20%), Positives = 150/403 (37%), Gaps = 41/403 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +   P G  D    E R +    + + ++   YG+  I+TP  EY D   K +      +
Sbjct: 4   KLHTPEGVRDIYNTECRKKLTTQEKLHDVLHAYGYQDIQTPTFEYFDVFRKEIG--TISS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++   D DG  ++LR D+T  +AR  A  F+T  +P R   +G  F N     GR ++
Sbjct: 62  RELYKFFDRDGNTLALRPDITPSIARAAATLFETEEYPVRLCYMGNTFINHSSYQGRLKE 121

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q   + +G  +  ADAEM  M+ D L+ VG+K     + I +   +  +++  GL  D
Sbjct: 122 NTQMGAELIGMDSIEADAEMLAMVVDGLKKVGLKEFQ--VNIGHVDFIQSLMDATGLEED 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +K                     +  L+         +     N+             + 
Sbjct: 180 EKT-------------------EIHHLITNRNYFGVEEILDNQNVDDNIKAAFQGLPELM 220

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +  + +    +   I+     + L  + +L+   G   + I    ++     YYTG ++
Sbjct: 221 GDVEILDKAMGIAPNISAGLAVSYLQKLYKLLTLYGV-EDHITFDLSMSGSYGYYTGIIF 279

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 ++  GGRYD L+ +F  +N+P+ GF+I I  L+ AL   + 
Sbjct: 280 RAYT----------YGTGDAIVRGGRYDHLLEKFG-ENIPSIGFAIIIDELMSALSRQKI 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                     V          +        +  R  G   EM 
Sbjct: 329 PVETSHMNLIVY------TEATQKWAISLAKNFRAKGKCVEMH 365


>gi|58697438|ref|ZP_00372736.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536137|gb|EAL59747.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 223

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 86/227 (37%), Gaps = 24/227 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           +  +  RG  D    E      I  +   I   YGF P +TP+ EY++   K L D  D 
Sbjct: 1   MTNQTVRGTKDFLFDEWYKFKHIEQTASRISNLYGFLPAQTPIFEYTEVFTKTLGDSSDI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K ++S  D  G+ I+LR + TA + R + E         + +  GP FR E+   GR 
Sbjct: 61  ITKEMYSFNDKGGKSITLRPEFTAAIVRLLIEKKLQTP--IKLFSTGPAFRYERPQKGRQ 118

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILD 176
           RQF Q + +  G     AD E+  ++   L   GI +          D       R+ L 
Sbjct: 119 RQFHQINFEVFGIEDPKADIELISLVQHLLTEFGINKNVKLEINSLGDGETITKYREALI 178

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
               K      +            D  ++     +++L  +   D S
Sbjct: 179 LYFTKYQNDLSE------------DSKNRLIKNPLRILDSKDEKDKS 213


>gi|311064067|ref|YP_003970792.1| histidyl-tRNA synthetase HisS [Bifidobacterium bifidum PRL2010]
 gi|310866386|gb|ADP35755.1| HisS Histidyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 420

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 118/450 (26%), Positives = 191/450 (42%), Gaps = 50/450 (11%)

Query: 50  LEYSDSLGKFLPDEDRPNKGVF---SLQDDD-------GQWISLRYDLTAPLARYVAENF 99
           +E   SL K        +K ++    LQ+            + L +DLT PL+RYV E+ 
Sbjct: 1   MEQGSSLLKKGE----TSKEIYLLSRLQEVGHESDTPVNDRLGLHFDLTVPLSRYVVEHS 56

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS--AETADAEMCMMMADTLEA 157
             + FP + ++I  V+R E+   GRFR+F+Q D+D +G+    +  + E+ ++M   LE 
Sbjct: 57  GDLAFPFKRWQIQKVWRGERPQEGRFREFVQADIDVIGNGDLPDHYEVELPLVMVSALEE 116

Query: 158 VGIKR-NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
           +         +  NNRK+ +G    +GL   +       VLR IDKLDK G   V  LL 
Sbjct: 117 LRAFGLPKATVHANNRKLSEGFYRGLGLTDIE------GVLREIDKLDKIGADEVAKLLV 170

Query: 217 EGR-TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVI 275
           +    D +              D        D   + H + +     +   +G + L +I
Sbjct: 171 DTCGADEAQARACLELAELTAADGKELADKFDALCAAHGIADDSDAYMLARQGLDTLAMI 230

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
            +    +      +     I RGL+YYTG VYE  L              GS+  GGRYD
Sbjct: 231 VD--EAALIRPGAVIADLKIARGLDYYTGSVYETFLDGAA--------SLGSICSGGRYD 280

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            L S+   +  P  G SIG+SRL+  +     +  +      VL+   +      S   +
Sbjct: 281 NLASQ-GNRKYPGVGLSIGLSRLVSYMLHSAGAHASRVCPASVLVAVWNEQD--RSAANL 337

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ-----GTGERSRGMLQIKDL 450
               LR+ GI A++   ++K  G Q+KYAD+   P          G    S    ++K++
Sbjct: 338 IANTLRSRGIAADVAPTAAK-LGKQIKYADKLGIPYVWFPAGATDGDDTASD---EVKNI 393

Query: 451 AKGKELSREIKNNESWREARV-AQITIPIS 479
             G +   +  + +SW+   V A+ T+ I 
Sbjct: 394 VTGDQ---QPADPKSWQPDTVYARQTVVID 420


>gi|153953918|ref|YP_001394683.1| HisZ [Clostridium kluyveri DSM 555]
 gi|189043553|sp|A5N7Q4|HISZ_CLOK5 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|146346799|gb|EDK33335.1| HisZ [Clostridium kluyveri DSM 555]
          Length = 391

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 87/423 (20%), Positives = 174/423 (41%), Gaps = 44/423 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G  D   +E + + ++ + +R IY N GF  +++P LE+ D     + +   P + +
Sbjct: 8   IPEGTKDILFQECKKKVQVENILREIYINSGFLEVKSPTLEFYDVFN--IENSTLPQEKI 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D  G+ ++LR D+T P+AR V       V+P R      V+R  +   G+  +  Q
Sbjct: 66  YKLIDGQGRILALRADMTTPIARIVGTKLRDAVYPLRLCYTSNVYRVNESLNGKNSEITQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+ +G     ADAE+ +M   +L   G+   ++ I I + ++   ++E   L  ++K 
Sbjct: 126 SGVEVIGIKDINADAEVIIMGIKSLLNCGL--ENFKIEIGHAEMFKALVEDANLDYEEK- 182

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE--QIDIMVSFLSIDL 248
                             + ++  +         +         E   ++++     +  
Sbjct: 183 ------------------EKLRESIDTKNFTALNEILHENKGKFEKSSLNVLKELPKLFG 224

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              + E    +       K   ++  + E+V   G     + +   +V  ++YYTG ++ 
Sbjct: 225 GIEIIEKASCLTCNKRAIKALEDVRKVYEIVESIGLGE-YLSVDLGMVYHIDYYTGIIFR 283

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                            G++  GGRYD L+++F  +N PATGF+I +  +I +L++  + 
Sbjct: 284 GYTQ----------GFGGNILSGGRYDNLIAQFG-ENKPATGFAIDVDGIIKSLETNGNF 332

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
           ++   E   V       +  +  +     Q LR  GI AE+     +      +YA  +N
Sbjct: 333 SDKNDEKVLVYY-----NKQNFKEAYERAQSLREKGIVAEITHFDEE--KEAREYAHSKN 385

Query: 429 CPL 431
              
Sbjct: 386 MKF 388


>gi|167464362|ref|ZP_02329451.1| ATP phosphoribosyltransferase regulatory subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 397

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 91/396 (22%), Positives = 156/396 (39%), Gaps = 46/396 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D           +   +      +G++ I TP LE+ D++G     EDR    +F L
Sbjct: 1   GVKDYLPDAAAKLRHLDPQVTACMSRWGYNQILTPTLEFYDTVGAASATEDRK---LFKL 57

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D +G  + LR D+TAP+AR V+        P R     P+FR  +    R  +F Q  V
Sbjct: 58  LDRNGTTVVLRSDMTAPIARVVSSLLKDEPLPLRLSYHTPIFRAYEEKGARDAEFFQTGV 117

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           + VG ++  ADAE+  + A +LE+VGI    + I + +   L+ + E+            
Sbjct: 118 ELVGDASPDADAEIISLAASSLESVGISS--FTIVLGHVGYLNCLFEETLGDQKA----- 170

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                        G + +K  L +       +      L+ E I  + + L++  ++ + 
Sbjct: 171 -------------GQEELKQCLLDRNYVRYREQIHSFGLSEETITRLEAVLTLRGDREIL 217

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +      G+ A  +  +EL  I +++         + I  T+V    YYTG  +E     
Sbjct: 218 QKARKTAGSSAAREAVDELEEIWDVLEAYEVTP-HVVIDLTMVMDFSYYTGMTFEGYAAD 276

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                         V  GGRYD L+ +F  +  P+TGFS+  SR++  ++          
Sbjct: 277 LGF----------PVCSGGRYDHLMGQFG-RQAPSTGFSLKTSRILDFVEE--------- 316

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLR-TAGIRAE 408
                    + +  ++  K   Y Q  R    I  E
Sbjct: 317 -PSQPKRVLVLYTRENRKKALQYVQKRRMEEHIIVE 351


>gi|219854532|ref|YP_002471654.1| hypothetical protein CKR_1189 [Clostridium kluyveri NBRC 12016]
 gi|219568256|dbj|BAH06240.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 394

 Score =  136 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 87/423 (20%), Positives = 174/423 (41%), Gaps = 44/423 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G  D   +E + + ++ + +R IY N GF  +++P LE+ D     + +   P + +
Sbjct: 11  IPEGTKDILFQECKKKVQVENILREIYINSGFLEVKSPTLEFYDVFN--IENSTLPQEKI 68

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D  G+ ++LR D+T P+AR V       V+P R      V+R  +   G+  +  Q
Sbjct: 69  YKLIDGQGRILALRADMTTPIARIVGTKLRDAVYPLRLCYTSNVYRVNESLNGKNSEITQ 128

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+ +G     ADAE+ +M   +L   G+   ++ I I + ++   ++E   L  ++K 
Sbjct: 129 SGVEVIGIKDINADAEVIIMGIKSLLNCGL--ENFKIEIGHAEMFKALVEDANLDYEEK- 185

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE--QIDIMVSFLSIDL 248
                             + ++  +         +         E   ++++     +  
Sbjct: 186 ------------------EKLRESIDTKNFTALNEILHENKGKFEKSSLNVLKELPKLFG 227

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              + E    +       K   ++  + E+V   G     + +   +V  ++YYTG ++ 
Sbjct: 228 GIEIIEKASCLTCNKRAIKALEDVRKVYEIVESIGLGE-YLSVDLGMVYHIDYYTGIIFR 286

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                            G++  GGRYD L+++F  +N PATGF+I +  +I +L++  + 
Sbjct: 287 GYTQ----------GFGGNILSGGRYDNLIAQFG-ENKPATGFAIDVDGIIKSLETNGNF 335

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
           ++   E   V       +  +  +     Q LR  GI AE+     +      +YA  +N
Sbjct: 336 SDKNDEKVLVYY-----NKQNFKEAYERAQSLREKGIVAEITHFDEE--KEAREYAHSKN 388

Query: 429 CPL 431
              
Sbjct: 389 MKF 391


>gi|15828804|ref|NP_326164.1| histidyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|32130142|sp|Q98QM8|SYH_MYCPU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|14089747|emb|CAC13506.1| HISTIDYL-TRNA SYNTHETASE (HISTIDINE--TRNA LIGASE) (HISRS)h)
           [Mycoplasma pulmonis]
          Length = 420

 Score =  136 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 81/450 (18%), Positives = 160/450 (35%), Gaps = 65/450 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           ++ +  +G  D   ++      I ++     + + F  +ETP++E  +   +   D  D 
Sbjct: 1   MKFQKLKGTRDYYFQDSNKLEIIRNAFFTSAKKFNFSFLETPIIENVELFKRTSGDFSDL 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K ++S +D   + I+LR + TAP  R + EN   +    + +  GP+FR E    GR 
Sbjct: 61  VKKELYSFEDKSKRQIALRPEGTAPALRAIVENNL-LQKHNKFFYFGPMFRYENPQKGRQ 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGL 184
           RQF    ++ +   +   + E+     + L+ + I   +  I    + +     L+ +  
Sbjct: 120 RQFFSGGIEWLEKQSPFTNIEIIFFAKNFLDTLKIDDYEIVINWIGHPEQRKNYLDHLKN 179

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           + +   N+                +  K  L         D  +      +    +  FL
Sbjct: 180 YLNQFENQ--------------LEEISKERLKNNALRILDDKIESQKAFVKNAPKIHDFL 225

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +  ++ ++L +L K                           + K+   +VRGL+YY+ 
Sbjct: 226 PKESLENFYQLQDLFKKF-----------------------DIKFKVDPFLVRGLDYYSD 262

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E +                ++ GGG Y  L+    G+N+   GF  G+ R++  +  
Sbjct: 263 FVFEFVSTNQN------LGAQKTLLGGGVYSSLLKELGGENIEGIGFGFGLERIMEVID- 315

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-G--IRAEMFLGSSKNFGNQL 421
                 N  +     IT    + D L         LR   G  I+ +  +    NF    
Sbjct: 316 -----LNNFKDDAKKITAFASNEDDLIALLK----LRNNFGDLIKIDC-INKVVNFKKIF 365

Query: 422 KYADRRNCPLAIIQGTGERSR--GMLQIKD 449
           K    +     I     E +     + +K+
Sbjct: 366 KSKQIKESDFLIF---KELNNAQNEVSLKN 392


>gi|229078688|ref|ZP_04211242.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock4-2]
 gi|228704561|gb|EEL56993.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock4-2]
          Length = 420

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 76/435 (17%), Positives = 170/435 (39%), Gaps = 49/435 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT--SEQID 238
           K+ +H +++                     ++  +         +F     L    E + 
Sbjct: 172 KLSIHDEEERV-------------------LRTYIESKNYAALSNFIGEKKLNRCDETVR 212

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++     +     + E  E +  +   +     +  + E +   GY S  I I   +++ 
Sbjct: 213 LLEKLPRLFGNLEVIEEAEKLASSNEMKMAIARIKEMYETIETLGYGS-YISIDLGMIQH 271

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG +++  +                +  GGRYD L+  F    +PA G ++ ++++
Sbjct: 272 LDYYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQI 320

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           + AL+  +      +         + ++ + L++ +    +LR  G  A + L S  N  
Sbjct: 321 VKALQEQQEPYERNQID-----IVIHYELNRLAEAERLRNLLRKDGKNAWLSLFS--NLS 373

Query: 419 NQLKYADRRNCPLAI 433
           +  ++A +      +
Sbjct: 374 DTFQFARKNKIGTVV 388


>gi|238925267|ref|YP_002938784.1| histidine--tRNA ligase [Eubacterium rectale ATCC 33656]
 gi|238876943|gb|ACR76650.1| histidine--tRNA ligase [Eubacterium rectale ATCC 33656]
 gi|291527508|emb|CBK93094.1| histidyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 419

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 109/429 (25%), Positives = 185/429 (43%), Gaps = 51/429 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G  D    E+ IR+ +   I++ Y ++GF PIETP +E   +L      E+   K 
Sbjct: 6   KPVNGMKDILPAEMEIRDYVTSVIKDTYRSFGFTPIETPCMENIANLTSKQGGEN--EKL 63

Query: 70  VFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           +F +     +                +RYDLT PL+RY + N + +  P +  ++G V+R
Sbjct: 64  IFKVMKRGEKLNLETAKEESDVVDFGMRYDLTVPLSRYYSNNANNLPSPFKALQMGSVWR 123

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            ++   GR+RQF QCD+D +G  +  A+ E+      T+  +G    ++ I IN R+IL 
Sbjct: 124 ADRPQRGRYRQFTQCDIDILGEPSNLAEIELITATTTTIGRLGF--ENFEIRINERRILK 181

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
            +    G   +D       V   +DK+DK G++GV   L +                 E 
Sbjct: 182 AMAAYSGFAEED----YDSVFITLDKMDKIGVEGVASELAQD------------GYPQEN 225

Query: 237 IDIMVSFLSI-----DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           ID  +    +     D+ + ++ L E +   +  E+    +  I+  V  +      +  
Sbjct: 226 IDKYLDLFKLLEQTRDVTEGVNILSEKLGEYL-DEEVVTNMTEIATAVNATKGAKFELVF 284

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E             P +  + GGGGRYD ++ +F G +VPA GF
Sbjct: 285 DPTLVRGMSYYTGTIFEI----------SMPELGAACGGGGRYDKMIGKFTGNDVPACGF 334

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF- 410
           SIG  R+I+ L                 +    + +D L       +  R  G +  +  
Sbjct: 335 SIGFERIILLLMESG-FKIPESPKKVAYLVEKKYPADKLVDVMNQAKDARANGQQVLVVR 393

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 394 MNKNKKFQK 402


>gi|75759734|ref|ZP_00739814.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218896435|ref|YP_002444846.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           G9842]
 gi|228900085|ref|ZP_04064318.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis IBL 4222]
 gi|226702195|sp|B7IN97|HISZ_BACC2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|74492775|gb|EAO55911.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218542182|gb|ACK94576.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           G9842]
 gi|228859491|gb|EEN03918.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis IBL 4222]
          Length = 420

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 77/433 (17%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLNVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  + E +   GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEMYETMETLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F  + +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFG-ETLPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +         + ++ + L++ +    +LR  G  A + L S  N  + 
Sbjct: 323 ALQEQQEPYERNQID-----IVIHYELNRLAEAERLRNLLRKDGKNAWLSLFS--NLSDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIGTVV 388


>gi|229043245|ref|ZP_04190967.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH676]
 gi|229144104|ref|ZP_04272519.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           BDRD-ST24]
 gi|296502078|ref|YP_003663778.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis BMB171]
 gi|228639323|gb|EEK95738.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           BDRD-ST24]
 gi|228726106|gb|EEL77341.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH676]
 gi|296323130|gb|ADH06058.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis BMB171]
          Length = 420

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 77/433 (17%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLNVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  + E +   GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEMYETIETLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +         + ++ + L++ +    +LR  G  A + L S  N  + 
Sbjct: 323 ALQEQQEPYERNQID-----IVIHYELNRLAEAERLRNLLRKDGKNAWLSLFS--NLSDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIGTVV 388


>gi|88856063|ref|ZP_01130724.1| histidyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88814631|gb|EAR24492.1| histidyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 430

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 127/433 (29%), Positives = 195/433 (45%), Gaps = 54/433 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            PRG  D    E   R R+L  IR  Y  +GFD IETP++E S  L   L  ++   K  
Sbjct: 7   PPRGMRDFLPAEKARRERVLGVIRGSYRAHGFDEIETPVMEDSSRLHAGLGGDN--EKLA 64

Query: 71  FSLQDDDGQ--------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           F++                     + LR+DLT PLAR+ A +   +    R  +I PV+R
Sbjct: 65  FAVMKRGLTADKLQAASEALDLADLGLRFDLTVPLARFYATHRAELPKVFRAIQIAPVWR 124

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            E+   GR+RQF+QCD+D +G +  +A+ E+    A TL+A+G   +   I +N+R++L 
Sbjct: 125 AERPQKGRYRQFVQCDIDIMGEAGPSAEIELITATAATLDALG--IDGCTIRVNDRRLLS 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
             L  +G    +       VL  +DKLDK G +GV   L E    N+        L+  Q
Sbjct: 183 SALTILGFPLKE----HDAVLITVDKLDKLGAEGVIAELRERAFPNAPVAALAEFLSRPQ 238

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK-SGYNSNRIKISSTI 295
            +I   F +  +  ++             E   +EL  I   V    G +   I+    +
Sbjct: 239 PEIKTEFTADAIRAALPA--------GVNETVISELAAIGHAVEAGRGTSGALIEFDPWL 290

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           VRG+ YYTG ++E             P +  S+GGGGRYDG++ RF G +VPA GFS+G 
Sbjct: 291 VRGMGYYTGAIFEV----------AHPSLGYSLGGGGRYDGMIGRFLGSDVPAVGFSLGF 340

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSS 414
            RL+  ++  E+S ++           + +D+D            L  +G R  +     
Sbjct: 341 ERLVDLVELDEASEDDQ--------LALIYDADVNPTVLVRLQAELIRSGKRVRLE-SRP 391

Query: 415 KNFGN---QLKYA 424
           +       QL+ A
Sbjct: 392 RKLPQLLDQLRDA 404


>gi|228951882|ref|ZP_04113980.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229069056|ref|ZP_04202348.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           F65185]
 gi|229177911|ref|ZP_04305283.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           172560W]
 gi|228605399|gb|EEK62848.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           172560W]
 gi|228714001|gb|EEL65884.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           F65185]
 gi|228807805|gb|EEM54326.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 420

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 76/435 (17%), Positives = 170/435 (39%), Gaps = 49/435 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT--SEQID 238
           K+ +H +++                     ++  +         +F     L    E + 
Sbjct: 172 KLSIHDEEERV-------------------LRTYIESKNYAALSNFIGEKKLNRCDETVR 212

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++     +     + E  E +  +   +     +  + E +   GY S  I I   +++ 
Sbjct: 213 LLEKLPRLFGNLEVIEEAEKLASSNEMKMAIARIKEMYETIETLGYGS-YISIDLGMIQH 271

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG +++  +                +  GGRYD L+  F    +PA G ++ ++++
Sbjct: 272 LDYYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQI 320

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           + AL+  +      +         + ++ + L++ +    +LR  G  A + L S  N  
Sbjct: 321 VKALQEQQEPYERNQID-----IVIHYELNRLAEAERLRNLLRKDGKNAWLSLFS--NLS 373

Query: 419 NQLKYADRRNCPLAI 433
           +  ++A +      +
Sbjct: 374 DTFQFARKNKIGTVV 388


>gi|282896687|ref|ZP_06304695.1| ATP phosphoribosyltransferase regulatory subunit [Raphidiopsis
           brookii D9]
 gi|281198405|gb|EFA73293.1| ATP phosphoribosyltransferase regulatory subunit [Raphidiopsis
           brookii D9]
          Length = 403

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 95/436 (21%), Positives = 169/436 (38%), Gaps = 53/436 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D    ++  +  I D ++ ++  +G+  I T  LE  D+L      E   
Sbjct: 1   MVYQPAAGARDLLPLDVAQKRWIEDRLQQVFHRWGYHRIITSTLERMDTLMAG---EAID 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE-KHGPGRF 125
              V  LQ    + + LR +LTA +AR V    +   +P R Y    VFR   +    R 
Sbjct: 58  RHKVIQLQTGQDEDLGLRPELTASIARTVVTRMEMANYPQRLYYNANVFRRNWEKRHNRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           +++ Q  V+ +G+    A+AE+ ++ ++ L A+G+  N +H+ +    I   +L      
Sbjct: 118 QEYYQAGVELLGAEGLLANAEVLLLASNCLTALGL--NQWHLILGEAGITKSLLHAFPSE 175

Query: 186 GDDKLNERLIVLR--AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              ++   +  L   AID L           L E     +         + E +  + +F
Sbjct: 176 IRSQVRMAIANLDSVAIDTLP----------LNEDLHKQARIMMDLRGKSGEVLQKVSNF 225

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                +                    N L  + EL+   G  S  + +  ++++ ++YYT
Sbjct: 226 PLDSSQ----------------RAAVNHLKSLVELLEAEGKFS--LILDLSLIQTIDYYT 267

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG--LVSRFKGQNVPATGFSIGISRLIVA 361
           G V+E +                 +G GGRYD    +   +G+N+P  GF + I  L   
Sbjct: 268 GIVFEVV--------GDLNGQAQVLGRGGRYDQLLSLYHPQGENIPGIGFELSIDDLYQV 319

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGN 419
           L S +     I          +    ++      Y Q LR +   +R EM L + K+   
Sbjct: 320 LASTQKLPQTIPSSNW---LVVPEGDNAQIAAFAYAQKLRDSTHLVRVEMEL-AGKDPQW 375

Query: 420 QLKYA-DRRNCPLAII 434
             KYA +R    +A I
Sbjct: 376 TRKYARERSIAQIAWI 391


>gi|291524448|emb|CBK90035.1| histidyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 419

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 109/429 (25%), Positives = 184/429 (42%), Gaps = 51/429 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G  D    E+ IR+ +   I++ Y ++GF PIETP +E   +L      E+   K 
Sbjct: 6   KPVNGMKDILPAEMEIRDYVTSVIKDTYRSFGFTPIETPCMENIANLTSKQGGEN--EKL 63

Query: 70  VFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           +F +     +                +RYDLT PL+RY + N + +  P +  ++G V+R
Sbjct: 64  IFKVMKRGEKLNLETAKEESDVVDFGMRYDLTVPLSRYYSNNANNLPSPFKALQMGSVWR 123

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            ++   GR+RQF QCD+D +G  +  A+ E+      T+  +G    ++ I IN R+IL 
Sbjct: 124 ADRPQRGRYRQFTQCDIDILGEPSNLAEIELITATTTTIGRLGF--ENFEIRINERRILK 181

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
            +    G   +D       V   +DK+DK G+ GV   L +                 E 
Sbjct: 182 AMAAYSGFAEED----YDSVFITLDKMDKIGVDGVASELAQD------------GYPQEN 225

Query: 237 IDIMVSFLSI-----DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           ID  +    +     D+ + ++ L E +   +  E+    +  I+  V  +      +  
Sbjct: 226 IDKYLDLFKLLEQTRDVTEGVNILSEKLGEYL-DEEVVTNMTEIATAVNATKGAKFELVF 284

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E             P +  + GGGGRYD ++ +F G +VPA GF
Sbjct: 285 DPTLVRGMSYYTGTIFEI----------SMPELGAACGGGGRYDKMIGKFTGNDVPACGF 334

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF- 410
           SIG  R+I+ L                 +    + +D L       +  R  G +  +  
Sbjct: 335 SIGFERIILLLMESG-FKIPESPKKVAYLVEKKYPADKLVDVMNQAKDARANGQQVLVVR 393

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 394 MNKNKKFQK 402


>gi|163939317|ref|YP_001644201.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|229822703|sp|A9VLH1|HISZ_BACWK RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|163861514|gb|ABY42573.1| Histidine--tRNA ligase [Bacillus weihenstephanensis KBAB4]
          Length = 420

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 78/433 (18%), Positives = 173/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +      I    +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRGDIP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGIENVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ ++ +++   R  +           ++  K                  N   E + ++
Sbjct: 172 KLPINDEEEKLLRTYIESKNYAALSHFIEEKK-----------------LNRCDETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + + GY S  I I   +V+ L+
Sbjct: 215 EKLPRLFGSLDVVEEAEKLASSNEMKMAIARVKEIYETIEQLGYGS-YISIDLGMVQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-MPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G  A++ L S  N  + 
Sbjct: 323 ALQEQQEPYKRKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKNAQLSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A++      +
Sbjct: 376 FQFANKNKIMTVV 388


>gi|229010808|ref|ZP_04168005.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus mycoides
           DSM 2048]
 gi|228750482|gb|EEM00311.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus mycoides
           DSM 2048]
          Length = 420

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 78/433 (18%), Positives = 172/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +      I    +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRGDIP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGIENVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ ++ +++   R  +           ++  K                  N   E + ++
Sbjct: 172 KLPINDEEEKLLRTYIESKNYAGLSHFIEEKK-----------------LNRCDETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + + GY S  I I   +V+ L+
Sbjct: 215 EKLPRLFGSLDVVEEAEKLASSNEMKMAIARVKEIYETIEQLGYGS-YISIDLGMVQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F     PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-TPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G  A++ L S  N  + 
Sbjct: 323 ALQEQQEPYKRKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKNAQLSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A++      +
Sbjct: 376 FQFANKNKIMTVV 388


>gi|71894452|ref|YP_278560.1| histidyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|83305872|sp|Q4A5X2|SYH_MYCS5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|71851240|gb|AAZ43849.1| histidyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 498

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 85/467 (18%), Positives = 164/467 (35%), Gaps = 60/467 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ +  +G  D   ++  +++ +          +GF+ +E P LE++      +   D  
Sbjct: 1   MKYQRVKGTQDYGVEKAFLKDAVESLFLKEVRLHGFEYVELPTLEHAQLFRSTVAQSDIG 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRF 125
           NK ++   D   + + LR ++TA   R   +N         +   +G VFR E+   GR+
Sbjct: 61  NKEMYEFLDKSQRELCLRPEMTANFVRAFVQNKWHAASAENKYAYVGKVFRYERPQKGRY 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK---RNDYHIGINNRKILDGILEKI 182
           R+F Q  V+ VG +    D  +  ++   L  + IK   + +Y      RK  +  L K 
Sbjct: 121 REFTQAGVEFVGKADFFKDLYVITLVLRLLAKLHIKYTLKLNYISNKETRKKYEETLHKY 180

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            L   D+       L    +         ++L  +   D+  DF K A         +  
Sbjct: 181 LLEYKDQ-------LSESSQKRLETGNVFRVLDDKE--DSQKDFVKNA-------PKLSD 224

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           F S + ++ +  +   +      E  F+E                       +VRGL+YY
Sbjct: 225 FYSEEDKEYVKNIKRGLDTYHGLEYQFDE----------------------QVVRGLDYY 262

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              V+E  +       K        + GGGRY  L+   +G    + GF++G+ R++  L
Sbjct: 263 DDLVFEVSI-------KDSKAAQDVIIGGGRYSNLIKDLEGPETSSIGFAMGVDRVVDYL 315

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR------TAGIRAEMFLG-SSK 415
              E    ++ ++         +              +          I + +     S 
Sbjct: 316 MDQEVYKEHLDKLETAHSENEYYFWAHPEASYKLNFFVWFFNLQLNEHISSSLLFDYDSP 375

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           N     + A + N    +           L + D   G +   ++K 
Sbjct: 376 NRNKAFEKAKKLNSKAFVTLEED----NSLTVYDFKYGTKKDADLKE 418


>gi|229057136|ref|ZP_04196527.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH603]
 gi|228720186|gb|EEL71766.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH603]
          Length = 420

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 78/433 (18%), Positives = 173/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +      I    +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRGDIP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGIENVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ ++ +++   R  +           ++  K                  N   E + ++
Sbjct: 172 KLPINDEEEKLLRTYIESKNYAGLSHFIEEKK-----------------LNRCDETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + + GY S  I I   +V+ L+
Sbjct: 215 EKLPRLFGSLDVVEEAEKLASSNEMKMAIARVKEIYETIEQLGYGS-YISIDLGMVQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-MPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G  A++ L S  N  + 
Sbjct: 323 ALQEQQEPYKRKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKNAQLSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A++      +
Sbjct: 376 FQFANKNKIMTVV 388


>gi|228957780|ref|ZP_04119521.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228801862|gb|EEM48738.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 420

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 77/433 (17%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLNVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  + E +   GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEMYETIEMLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +         + ++ + L++ +    +LR  G  A + L S  N  + 
Sbjct: 323 ALQEQQEPYERNQID-----IVIYYELNRLAEAERLRNLLRKDGKNAWLSLFS--NLSDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIGTVV 388


>gi|229132310|ref|ZP_04261164.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           BDRD-ST196]
 gi|228651016|gb|EEL06997.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           BDRD-ST196]
          Length = 420

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 78/433 (18%), Positives = 173/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +      I    +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRGDIP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGLENVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ ++ +++   R  +           ++  K                  N   E + ++
Sbjct: 172 KLPINDEEEKLLRTYIESKNYAALSHFIEEKK-----------------LNRCDETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + + GY S  I I   +V+ L+
Sbjct: 215 EKLPRLFGSLDVVEEAEKLASSNEMKMAIARVKEIYETIEQLGYGS-YISIDLGMVQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-MPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G  A++ L S  N  + 
Sbjct: 323 ALQEQQEPYKRKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKNAQLSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A++      +
Sbjct: 376 FQFANKNKIMTVV 388


>gi|304407293|ref|ZP_07388946.1| histidyl-tRNA synthetase 2 [Paenibacillus curdlanolyticus YK9]
 gi|304343734|gb|EFM09575.1| histidyl-tRNA synthetase 2 [Paenibacillus curdlanolyticus YK9]
          Length = 400

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 90/407 (22%), Positives = 155/407 (38%), Gaps = 45/407 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D     +    RI     +    +G++ I TP +E+ D++G   
Sbjct: 1   MSKPK--VFEKPIGVKDYLPLAVAKLRRIERQALDCMSQWGYEQIITPTMEFYDTVGVAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   + +F L ++ G  + LR D+TAP+AR V+       FP R      VFR  + 
Sbjct: 59  ATSD---QKLFKLLNNRGTTLVLRSDMTAPIARVVSSLLKETAFPLRLSYHANVFRAIEE 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ VG  +  ADAE+  +   +L+A G+    + I I +   L+G+ E
Sbjct: 116 EAGRDAEFYQTGVELVGDPSAEADAEVVALAIASLKAAGV--ERFKIAIGHVGFLNGLFE 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +  L    +                   + +K  L         +  +   L       +
Sbjct: 174 E-TLPNRPEAQ-----------------EALKACLLGRDYVGYREKLRELKLAEPVQREL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L +   + + +    +      +     L  I ++++  G   + + I  T++    
Sbjct: 216 EGILRLRGGQEICDQAMEMSVDATAKSSIKHLCEIWDVLKAYGVC-DNVLIDLTMIGDFS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  +E                   V  GGRYD L+++F  +  PATGF++  +R++ 
Sbjct: 275 YYTGMTFEGYAADLGF----------PVVSGGRYDNLLTQFG-RPAPATGFALKTTRILE 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            L S E                + +D+          Q LR  G+  
Sbjct: 324 LLGSEEEPQPER--------VLIGYDALGREAALEQAQQLRAEGVIV 362


>gi|228907135|ref|ZP_04070997.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis IBL 200]
 gi|228938617|ref|ZP_04101222.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971498|ref|ZP_04132122.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228978109|ref|ZP_04138487.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis Bt407]
 gi|228781581|gb|EEM29781.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis Bt407]
 gi|228788157|gb|EEM36112.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228820993|gb|EEM67013.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228852467|gb|EEM97259.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis IBL 200]
 gi|326939125|gb|AEA15021.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 420

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 77/433 (17%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  + E +   GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEMYETIETLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +         + ++ + L++ +    +LR  G  A + L S  N  + 
Sbjct: 323 ALQEQQEPYERNQID-----IVIHYELNRLAEAERLRNLLRKDGKNAWLSLFS--NLSDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIGTVV 388


>gi|112959228|gb|ABI27122.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959231|gb|ABI27124.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959234|gb|ABI27126.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959237|gb|ABI27128.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959240|gb|ABI27130.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959243|gb|ABI27132.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959246|gb|ABI27134.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959249|gb|ABI27136.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959252|gb|ABI27138.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959255|gb|ABI27140.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959258|gb|ABI27142.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959261|gb|ABI27144.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959264|gb|ABI27146.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959267|gb|ABI27148.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959270|gb|ABI27150.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959273|gb|ABI27152.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959276|gb|ABI27154.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959279|gb|ABI27156.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959282|gb|ABI27158.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959285|gb|ABI27160.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959288|gb|ABI27162.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959291|gb|ABI27164.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959294|gb|ABI27166.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959297|gb|ABI27168.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959300|gb|ABI27170.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959303|gb|ABI27172.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959306|gb|ABI27174.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959309|gb|ABI27176.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959312|gb|ABI27178.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959315|gb|ABI27180.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959318|gb|ABI27182.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959321|gb|ABI27184.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959324|gb|ABI27186.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959327|gb|ABI27188.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959330|gb|ABI27190.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959333|gb|ABI27192.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959336|gb|ABI27194.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959339|gb|ABI27196.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959342|gb|ABI27198.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959345|gb|ABI27200.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959348|gb|ABI27202.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959351|gb|ABI27204.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959354|gb|ABI27206.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959357|gb|ABI27208.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959360|gb|ABI27210.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959363|gb|ABI27212.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959366|gb|ABI27214.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959369|gb|ABI27216.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959372|gb|ABI27218.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959375|gb|ABI27220.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959378|gb|ABI27222.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959381|gb|ABI27224.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959384|gb|ABI27226.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959387|gb|ABI27228.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959390|gb|ABI27230.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959393|gb|ABI27232.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959396|gb|ABI27234.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959399|gb|ABI27236.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959402|gb|ABI27238.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959405|gb|ABI27240.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959408|gb|ABI27242.1| histidyl-tRNA synthetase [Listeria monocytogenes]
 gi|112959411|gb|ABI27244.1| histidyl-tRNA synthetase [Listeria monocytogenes]
          Length = 88

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
          +  +LPRG  D   +E+   + +    + + ENY ++ I TP+ E+++   + + D  D 
Sbjct: 1  MDLQLPRGTRDILPEEVSKWHFLETEFKKVCENYQYEEIRTPVFEHTELFERGVGDSTDI 60

Query: 66 PNKGVFSLQDDDGQWISLRYDLTAPLAR 93
           +K +++ QD  G+ ++LR + TA + R
Sbjct: 61 VSKEMYTFQDKGGRSLTLRPEGTASVVR 88


>gi|89896662|ref|YP_520149.1| hypothetical protein DSY3916 [Desulfitobacterium hafniense Y51]
 gi|122481291|sp|Q24QI7|HISZ_DESHY RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|89336110|dbj|BAE85705.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 383

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 92/427 (21%), Positives = 163/427 (38%), Gaps = 56/427 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             +P G  D    E+ ++ +   S  ++++ + +  + TP LEY   +     + D    
Sbjct: 8   LRIPEGMHDLLPDELALQEQAETSALDLFKAWAYQKVATPTLEYGACIQPVEEEGDSF-- 65

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             F L D  G  + LR +LT  +AR V+       FP R      VFR  K     FR  
Sbjct: 66  --FKLFDRQGHVLVLRPELTTSIARMVSTRMRGTAFPLRLCYAADVFRYSKSHKQEFR-- 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +GS++  ADAE+  +  + L  +G    D+ I + +  I  GI+ ++G+  + 
Sbjct: 122 -QVGVELIGSASSAADAEVVALAIEALRKIGGM--DFQINLGHMGIFTGIMAELGVPQEF 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L+ +                     L            K     +   D+++    +  
Sbjct: 179 QLHYQ-------------------EKLARKDFVGIERLVKDYGFETRVQDVLLKLPHLHG 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++ M +         +  +  N L  +   ++  G   + + +   I+RG  YYTG V+E
Sbjct: 220 KEDMLDQVLEWSRRPSLLEAVNALRQVYRYLKDFGV-QDYVSLDLGILRGFSYYTGAVFE 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +          P V   V  GGRYD L   F  ++ PATGF+I +  +I  +      
Sbjct: 279 GYV----------PGVGFPVVEGGRYDALYGDFG-EDAPATGFAINLKAIIEQM------ 321

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF--GNQLKYADR 426
                      +     D   +SK     + LR  G R EM L    +      ++ A+ 
Sbjct: 322 --VCSNAERPEVLVYGSD---VSKVIAEARKLRQTGKRVEMCLE---SLTQEQAMESAEC 373

Query: 427 RNCPLAI 433
           +     +
Sbjct: 374 KGIKEVV 380


>gi|253578281|ref|ZP_04855553.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850599|gb|EES78557.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 418

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 116/430 (26%), Positives = 185/430 (43%), Gaps = 45/430 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   KE+ IRN +++ IR  Y  +GF  IETP +E+ ++L      E+  
Sbjct: 3   LKKKPVTGMKDILPKEMEIRNYVMNMIRETYGTFGFSSIETPCVEHIENLSSKQGGEN-- 60

Query: 67  NKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY + N + +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLKLAEAEKESDLVDSGLRYDLTVPLSRYYSNNANELPAPFKALQMGN 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+ +     L  +     ++ I IN+RK
Sbjct: 121 VWRADRPQRGRFRQFMQCDIDILGEPTYLAEIELVLATTTLLGKLDFH--NFTIRINDRK 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL  + +  G   +        V   +DK+DK GL+GV   L +         T    L 
Sbjct: 179 ILKAMAQYSGFPQES----FDTVFIILDKMDKIGLEGVAEELEKEGFAKESIDTY-LGLF 233

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            E    +         + +    E +K  +  +    +L  I   V        ++    
Sbjct: 234 KEITSDI---------EGVRYCKEKLKDVLDPKVA-EDLETIISTVDSVKTADFKMSFDP 283

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F G N  A GFSI
Sbjct: 284 TLVRGMSYYTGPIFEI----------SMDEFGGSVGGGGRYDEMIGKFTGNNTSACGFSI 333

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFL 411
           G  R+++ L          K      +   +  +D +       Q  R AG  I   +  
Sbjct: 334 GFERIVMLLLERN-YEIPTKNGKKAYLIEKNMPADKMLTILKQAQEERNAGTQINISIMK 392

Query: 412 GSSKNFGNQL 421
            + K   +Q+
Sbjct: 393 KNKKFQKDQM 402


>gi|172037696|ref|YP_001804197.1| ATP phosphoribosyltransferase regulatory subunit [Cyanothece sp.
           ATCC 51142]
 gi|226707569|sp|B1WU69|HISZ_CYAA5 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|171699150|gb|ACB52131.1| histidyl-tRNA synthetase 2 [Cyanothece sp. ATCC 51142]
          Length = 403

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 89/442 (20%), Positives = 164/442 (37%), Gaps = 52/442 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I D+++ ++  +G+  I T  +E  D+L      ED  
Sbjct: 1   MIHQPPAGARDLLPLEVVQKAWINDTLQQVFGQWGYQRIVTSTIERLDTLKAGGAIEDET 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG-RF 125
              V  L ++  + + LR +LTA +AR          +P R      VFRN   G   R 
Sbjct: 61  ---VIQLHNNSREQLGLRPELTASVARAAVTRMANTSYPQRLCYRANVFRNPPSGHHGRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  V+ + S    ADAE+ +++A+ L+ +  +   +++ + +  +   +L      
Sbjct: 118 LEFYQAGVELLFSGGTLADAEILLLVAECLQKL--QIPSWYLILGDAGLTRSLLSPFPEA 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++   L  L  +   +            E     +           + +  +V    
Sbjct: 176 LRQEVRHCLATLDYVKLDNLSYPN-------EELKHRASLLFNLRGKPEDVLSKVVDLTL 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               K                   N L  + ELV  S      + +  ++++  +YYTG 
Sbjct: 229 DQTGKH----------------CLNNLKSLIELVNHSTSYKLPLTLDLSLIQTFDYYTGI 272

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
           +++AI         Q      ++G GGRYD L  V   + ++ P  GFS+ +  L   L 
Sbjct: 273 IFKAI--------GQTNHKLQNLGQGGRYDQLLGVYHPQKKSAPGIGFSLNVGALHRCLL 324

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR--TAGIRAEMFLGSSKN---FG 418
           S +           +    +   S+S  +   Y Q LR     +R  + L  ++N     
Sbjct: 325 STDILPQKPL---LIDYLVVAKTSESQIEALKYAQQLRKDDNSLRVTIDL-ENRNEEEIK 380

Query: 419 NQLKYADRRNCP-LAIIQGTGE 439
              KYA       +  I+   E
Sbjct: 381 ---KYAQENGIKTIVWIEKGKE 399


>gi|166031885|ref|ZP_02234714.1| hypothetical protein DORFOR_01586 [Dorea formicigenerans ATCC
           27755]
 gi|166028338|gb|EDR47095.1| hypothetical protein DORFOR_01586 [Dorea formicigenerans ATCC
           27755]
          Length = 415

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 80/454 (17%), Positives = 158/454 (34%), Gaps = 53/454 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E   +  + + ++     +G+  I+TP  EY D   K +     P+K +
Sbjct: 7   TPEGVRDIYNVECGKKLALENRLKKTLHLFGYHDIQTPTFEYFDVFRKEIG--TIPSKDL 64

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D +G  + LR D+T  +AR  A  F     P R    G  F N  +  GR R+  Q
Sbjct: 65  YKFFDKEGNTLVLRPDITPSIARVAATLFGEEDLPIRLCYTGNTFINHSNNQGRLREVTQ 124

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              + +G  +  ADAEM  M+ ++++A+G+K     + + +      ++E   L  + + 
Sbjct: 125 MGAELIGDDSVEADAEMLAMVIESMQAIGLKEFQ--LSVGHLGFFQSLIEDAALDEEAR- 181

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                             + V  L+         ++     +     +   +  ++    
Sbjct: 182 ------------------ERVVELINNRNYFGVEEYLDSIMVKRSSKEAFAALGNLVGGV 223

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +    + +    +G      L  I +++   G     +    ++     YYTG ++   
Sbjct: 224 EVLAKAKNIAPNSSGIMAVKRLEKIYDILELYGV-EKFVTFDLSMTGNYGYYTGIIFRGY 282

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                           +V  GGRYD L+ +F   +  + GF+I I  L+ AL   +    
Sbjct: 283 TF----------GTGDAVVKGGRYDHLLEKFGKTSA-SIGFAIVIDELMNALIRQKIRIV 331

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
             ++        + +D           +  R      E+     K+    L+   R    
Sbjct: 332 YTRKNA-----IILYDESRARDAIRLAKDFRAKAKNTELI---KKSPEKGLEDYIRFGKE 383

Query: 431 L-----AIIQGTGERSRGMLQIKDLAKGKELSRE 459
                   I     +  G + + +L  G++    
Sbjct: 384 YYAGSLVYI-----KKSGEITMVNLVTGEQKEVN 412


>gi|229160455|ref|ZP_04288450.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           R309803]
 gi|228622865|gb|EEK79696.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           R309803]
          Length = 420

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +  ++R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQNLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + +K   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEIIGIDNVRAEIECVISVIQALQKLKVKA--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++   R  +           ++  K                  +   E + ++
Sbjct: 172 KLSIHDEEEKVLRTYIESKNYAALSNFIEEKK-----------------LDRCDETVSLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +V+ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEIYEAIEKLGYGS-YISIDLGMVQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    V A G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-VSAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  + S         +       + + +++ +    +LR  G  A + L S  N    
Sbjct: 323 ALQEQQVSYERESIDMMIHY-----ELNRVAEAERLRSLLRKDGKNARLSLFS--NLNAT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIVTVV 388


>gi|206967811|ref|ZP_03228767.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           AH1134]
 gi|206736731|gb|EDZ53878.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           AH1134]
          Length = 420

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 75/433 (17%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  + E +   GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARIKEMYETIETLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +         + ++ + +++ +    ++R  G  A + L S  N  + 
Sbjct: 323 ALQEQQEPYERNQIE-----IVIHYELNRIAEAERLRNLIRKDGKNAWLSLFS--NLSDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIRTVV 388


>gi|170581686|ref|XP_001895791.1| histidyl-tRNA synthetase [Brugia malayi]
 gi|158597141|gb|EDP35361.1| histidyl-tRNA synthetase, putative [Brugia malayi]
          Length = 257

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 22/266 (8%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPD 62
           + K     PRG  D   +++ +R ++LD +   +  +G   I+TP+ E  D L GK+  +
Sbjct: 13  QRKFEIRCPRGTRDYGPQDMTLRRQVLDVVTECFRRHGGVTIDTPVFELRDILMGKYGEE 72

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                K V+ L D  G+ +SLRYDLT P ARY+A N    +   + Y IG V+R +    
Sbjct: 73  G---GKLVYDLSDQGGELLSLRYDLTVPFARYLAMNK--TIMYLKRYHIGKVYRRDNPSR 127

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
           GRFR+F QCD D  GS          + +   +    +    + I +N++ +LDG+    
Sbjct: 128 GRFREFYQCDFDIAGSYDLMIPEAELLRIISEILN-ALDVGTFEIKVNHKLLLDGMFAVC 186

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +           V  +IDKLDK   + +K  L   +  +            +    + +
Sbjct: 187 DVPKK----LYKAVYSSIDKLDKLPWEDIKNELCNEKHIHC-----------DVASKLET 231

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKG 268
           F+ +            +K  +     
Sbjct: 232 FVRLRGCLHKANAKRSLKEILWNRNA 257


>gi|229189585|ref|ZP_04316600.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           ATCC 10876]
 gi|228593849|gb|EEK51653.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           ATCC 10876]
          Length = 420

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 76/433 (17%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRRDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  + E +   GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARIKEMYETIETLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +         + ++ +++++ +    +LR  G  A + L S  N  + 
Sbjct: 323 ALQEQQEPYERNQID-----IVIHYELNTIAEAERLRNLLRKDGKNAWLSLFS--NLSDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIGTVV 388


>gi|325264982|ref|ZP_08131709.1| histidine--tRNA ligase [Clostridium sp. D5]
 gi|324029672|gb|EGB90960.1| histidine--tRNA ligase [Clostridium sp. D5]
          Length = 421

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 112/429 (26%), Positives = 187/429 (43%), Gaps = 48/429 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   +E+ IR+  +  I+  Y+++GF  IETP +E+ ++L      ++  
Sbjct: 5   LKKKPVTGMKDIMPEEMEIRDYAIGLIKETYKSFGFSSIETPCVEHIENLCSKQGGDN-- 62

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY + + + +  P +  +IG 
Sbjct: 63  EKLIFKILKRGEKLKIDSAIEESDLIDGGLRYDLTVPLSRYYSNHANELPSPFKALQIGN 122

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF QCD+D +G     A+ E+ +     L  +  +  ++ I IN+RK
Sbjct: 123 VWRADRPQRGRFRQFTQCDIDILGEPGNLAEIELILATTALLGKLSFQ--NFTIRINDRK 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L  +    G    D  +  +     +DK+DK G+ GV   L E                
Sbjct: 181 FLKAMAAYSGFAEADYESVFIT----LDKMDKIGMDGVAAELMEN------------GYA 224

Query: 234 SEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E +D  +       +  + +    E +KG +  E     L +I   V  +     +I  
Sbjct: 225 KESVDKYLQLFKEITNDVEGVRYCKEKLKGFLEDEAA-ASLEMIITSVESAKEADFKISF 283

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQN+PA GF
Sbjct: 284 DPTLVRGMSYYTGTIFEI----------SMDEFGGSVGGGGRYDEMIGKFTGQNIPAVGF 333

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-F 410
           SIG  R+++ L                 +   +  +  + K     +  R AG +  +  
Sbjct: 334 SIGFERIVMLLLERG-FLVPSSREKKAFLIEKNMSAGEMLKVLDLAKKERAAGRQVMIVN 392

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 393 MKKNKKFQK 401


>gi|313906016|ref|ZP_07839369.1| Histidine--tRNA ligase [Eubacterium cellulosolvens 6]
 gi|313469129|gb|EFR64478.1| Histidine--tRNA ligase [Eubacterium cellulosolvens 6]
          Length = 416

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 122/434 (28%), Positives = 192/434 (44%), Gaps = 49/434 (11%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L+ +   G  D   +E+ IRN ++  IR  Y N+GF  IETP +E+ ++L      E+ 
Sbjct: 2   NLKKKPVTGMKDILPREMEIRNYVMQQIRETYANFGFTQIETPCVEHIENLNSKQGGEN- 60

Query: 66  PNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
             K +F +     +                LRYDLT PL+RY A N + +  P +  ++G
Sbjct: 61  -EKLIFKIMKRGEKLRLAEAKTEADLTDSGLRYDLTLPLSRYYANNANELPSPFKALQMG 119

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R ++   GRFRQF+QCD+D +G ++  A+ E+ +     L  VG K  ++ I IN+R
Sbjct: 120 SVWRADRPQRGRFRQFMQCDIDILGEASNIAEIELVLATTTVLGKVGFK--NFTIRINDR 177

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           +IL  +    G   +        V   +DK+DK GL GV   L E            A  
Sbjct: 178 RILKAMAAYSGFPEES----YDEVFIILDKMDKIGLDGVAAELTE------------AGF 221

Query: 233 TSEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
             E +D  +    +       +    E ++G +  +   ++L+ I   V  +     ++ 
Sbjct: 222 AQESVDKYLELFRLITPDVAGVQLAKEKLEGFLDPQYA-DDLMTIINSVEATKRAEFKMA 280

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              T+VRG+ YYTG ++E                 GSVGGGGRYD +V +F GQ+VPA G
Sbjct: 281 FDPTLVRGMSYYTGPIFEI----------SMDEFGGSVGGGGRYDEMVGKFIGQSVPAVG 330

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE-M 409
           FSIG  R+++ L   +            LI             +      R  G     +
Sbjct: 331 FSIGFERIVMLLLEHDFQVPGTAAKKAYLIEKKCSGDKIREVVEKAMAE-RQEGKTVNLL 389

Query: 410 FLGSSKNFGN-QLK 422
            +  +K F   QL+
Sbjct: 390 VMKKNKKFQKEQLE 403


>gi|42780598|ref|NP_977845.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           ATCC 10987]
 gi|54037291|sp|P62358|HISZ_BACC1 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|42736518|gb|AAS40453.1| histidyl-tRNA synthetase, putative [Bacillus cereus ATCC 10987]
          Length = 420

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 172/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR +         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     + + D         E + ++
Sbjct: 172 KLSIHEEEEK-----------VLRTYIESKNYAALSNFIREKNFDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEIYEAIDKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G + E+ L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVEISLCS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|30019553|ref|NP_831184.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           ATCC 14579]
 gi|229126819|ref|ZP_04255831.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           BDRD-Cer4]
 gi|46395768|sp|Q81G08|HISZ_BACCR RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|29895097|gb|AAP08385.1| Histidyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228656759|gb|EEL12585.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           BDRD-Cer4]
          Length = 420

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 76/433 (17%), Positives = 168/433 (38%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +  +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIQDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  + E +   GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEMYETIEMLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +         + ++ + L++ +    +LR  G  A + L S  N  + 
Sbjct: 323 ALQEQQEPYERNQID-----IVIHYELNRLAEAERLRNLLRKDGKNAWLSLFS--NLSDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIGTVV 388


>gi|288554097|ref|YP_003426032.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           pseudofirmus OF4]
 gi|288545257|gb|ADC49140.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           pseudofirmus OF4]
          Length = 393

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 89/409 (21%), Positives = 163/409 (39%), Gaps = 47/409 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D      R +  I D +      +G+  I+TP LE+ D+     
Sbjct: 1   MSKP--FMFEKPIGMRDTLPALYRTKKLIRDQLTTEMSLWGYQTIDTPTLEFYDT---VG 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 ++ +F L D  G  + LR D+TAP+AR VA +     FP R      V+R ++H
Sbjct: 56  DASAILDQQLFKLLDSKGHTLVLRPDMTAPIARLVASSLKEATFPVRLNYQSNVYRAQQH 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G+  +F Q  V+ +G    +AD E+  +M  +L+  G+  +++ + I +   +D +L 
Sbjct: 116 EGGKPAEFEQVGVELIGDGTVSADGEVIALMIASLKRAGL--DNFKVAIGHVGYVDALLL 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +  + +  L                    ++  L E       +  K  +L+S   D +
Sbjct: 174 DVVGNEERALV-------------------LRRYLYEKNYVGFKEHVKELSLSSIDKDRL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L +   K   +    +  T  GE+  NEL  + +++   G +S  +K+   +V  L 
Sbjct: 215 LKLLKLRGGKEALDQARELIQTEQGERALNELTQLWDVLESYGIDS-YVKLDLNLVLHLS 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E   G   +           +  GGRYD L+ +F          +    RL +
Sbjct: 274 YYTGVVFEGYGGDLGV----------PLSSGGRYDQLLEKFNR----PAPATGFGVRLDL 319

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
             +++  +    +         +    +  ++     +  R  GI   +
Sbjct: 320 LTEAIGKTAPGNEN------VCVIFSKERRTEATELARGKREEGISVVL 362


>gi|218233691|ref|YP_002366186.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           B4264]
 gi|229149704|ref|ZP_04277934.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           m1550]
 gi|226702196|sp|B7HHF9|HISZ_BACC4 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|218161648|gb|ACK61640.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           B4264]
 gi|228633735|gb|EEK90334.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           m1550]
          Length = 420

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 76/433 (17%), Positives = 168/433 (38%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +  +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIQDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  + E +   GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEMYETIEMLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +         + ++ + L++ +    +LR  G  A + L S  N  + 
Sbjct: 323 ALQEQQEPYERNQID-----IVIHYELNRLAEAERLRNLLRKDGKNAWLSLFS--NLSDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIGTVV 388


>gi|229108961|ref|ZP_04238562.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock1-15]
 gi|228674430|gb|EEL29673.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock1-15]
          Length = 420

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 76/433 (17%), Positives = 168/433 (38%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +  +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIQDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  + E +   GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEMYETIETLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +         + ++ + L++ +    +LR  G  A + L S  N  + 
Sbjct: 323 ALQEQQEPYERNQID-----IVIHYELNRLAEAERLRNLLRKDGKNAWLSLFS--NLSDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIGTVV 388


>gi|239624494|ref|ZP_04667525.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520880|gb|EEQ60746.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 423

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 113/440 (25%), Positives = 182/440 (41%), Gaps = 52/440 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M    K       G  D    E++IR  +++ I+  Y  +GF  IETP +E+ ++L    
Sbjct: 3   MALAKKPVT----GMKDITPAEMQIREYVMNQIKETYRGFGFSQIETPCVEHIENLTSKQ 58

Query: 61  PDEDRPNKGVFSLQDDDG----------QWIS---LRYDLTAPLARYVAENFDTIVFPCR 107
             ++   K +F +                 ++   LRYDLT PL+RY A N   +  P +
Sbjct: 59  GGDN--EKLIFKILKRGDKLNLEAAGGENDLTDSGLRYDLTLPLSRYYANNAANLPKPFK 116

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
             ++G V+R +K   GRFRQF+QCD+D +G +   A+ E+ +     L  +      + +
Sbjct: 117 ALQMGSVWRADKPQRGRFRQFVQCDIDILGDATSLAEIELILATTTALGKICPDNG-FTV 175

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            IN+R+IL G+    G   +        V   +DK+DK G +GV+  L E          
Sbjct: 176 RINDREILRGMALFCGFPEES----MDQVFIILDKMDKIGFEGVEKELLES--------- 222

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG--EKGFNELVVISELVRKSGYN 285
                  E +D  +  L  ++ K    +  L          +    L  I + V +    
Sbjct: 223 ---GYRKESVDTYLDMLK-NVTKDAAGVRALGDRLKEIMPLEVSENLAHIMDTVTEVAEA 278

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
              ++   T+VRG+ YYTG ++E                 GSV GGGRYD ++ +F G  
Sbjct: 279 EFGLEFDPTLVRGMSYYTGTIFEV----------SMEGFGGSVAGGGRYDKMIGKFTGME 328

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
            PA GFSIG  R++  L                 +     DS +L+         R  G+
Sbjct: 329 TPACGFSIGFERIVTILLD-NGFEVPGASDKKAFLFEKGVDSAALAGVIREAMAERRKGV 387

Query: 406 RAEMF-LGSSKNFGN-QLKY 423
           +  +  +  +K F   QL  
Sbjct: 388 QVLVAQMNKNKKFQKEQLSK 407


>gi|15616146|ref|NP_244451.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           halodurans C-125]
 gi|20138365|sp|Q9K6Z0|HISZ_BACHD RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|10176208|dbj|BAB07303.1| ATP phosphoribosyltransferase regulatory subunit/histidyl-tRNA
           synthetase [Bacillus halodurans C-125]
          Length = 397

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 86/404 (21%), Positives = 156/404 (38%), Gaps = 45/404 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D   +  + +  I D +      +G+D IETP LEY +++G   
Sbjct: 1   MSKP--FMFEKPFGMRDTLPEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETVGVVS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 ++ +F L D  G  + LR D+TAP+AR VA +     +P R      V+R +++
Sbjct: 59  A---ILDQQLFKLLDQQGNTLVLRPDMTAPIARLVASSLKDRAYPLRLAYQSNVYRAQQN 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G+  +F Q  V+ +G    +AD E+  +M   L+  G+   ++ + I +   ++ +L 
Sbjct: 116 EGGKPAEFEQLGVELIGDGTASADGEVIALMIAALKRAGLS--EFKVAIGHVGYVNALLM 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +  +                         ++  L E       +  K  NL++     +
Sbjct: 174 DVVGNEQRA-------------------DRLRRFLYEKNYVGYREHVKSLNLSTIDKSRL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           ++ LS+   ++  E    +  T  G+    E+  + E++   G  S  +K   T+V  + 
Sbjct: 215 MNLLSLRGGRAAIEEARGLIQTEKGKTALAEMTKLYEVLESYG-ASEYVKFDLTLVLHMS 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E       +           +  GGRYD L+S+F          + G    I 
Sbjct: 274 YYTGVVFEGYGNRLGV----------PLCSGGRYDELLSKFHRPAQ-----ATGFGVRID 318

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            L    +            I      ++   +     +  R  G
Sbjct: 319 LLVEALNGEIISNGHEQTCIL---FSNERRFEAIELARKKRANG 359


>gi|47206651|emb|CAF92276.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 446

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 78/372 (20%), Positives = 149/372 (40%), Gaps = 57/372 (15%)

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
             D+ I +N+R+ILDG+    G+  D    +   +   +DKLDK   + VK         
Sbjct: 90  IGDFRIKVNDRRILDGMFAVCGVPDD----KFRTICSTVDKLDKLPWEDVKK-------- 137

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL--VVISELV 279
              +  +   L+ +  D +  ++ +     + E     +     ++    L  + +    
Sbjct: 138 ---EMVQEKGLSEDVADQIGVYVGMQGGMDLAERLLQDQKMCQSKQACAGLTDIKLLFSY 194

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF----------PVMNEKQKPVVFGSVG 329
            +    ++++    ++ RGL+YYTG +YEA+L                  ++ V  GSV 
Sbjct: 195 LQLFQATDKVVFDLSLARGLDYYTGIIYEAVLSQTGVAPVATESSNGALTEECVTVGSVA 254

Query: 330 GGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           GGGRYDGL  +   K + VP  G SIGI R+   ++    ++        V +       
Sbjct: 255 GGGRYDGLVGMFDPKARKVPCVGVSIGIERIFSIMEQKAEASAEKVRTTEVQVMVAAAQK 314

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           + L +       L  AGI+AE+    +    +QL++ +    PL  I G  E   G++++
Sbjct: 315 NLLEERLRLITELWNAGIKAELMYKRNPKLLSQLQHCEETGIPLVAILGEQELKNGVVKL 374

Query: 448 KDLAKGKELSREIKNNESWREAR----------------------------VAQITIPIS 479
           +D+A   E+   ++ +  +   R                              Q+ +  +
Sbjct: 375 RDVATRDEVLHSVQCSYWYDLRRRTDELCPQWFDLLICGLLQTELTVNVLFFLQVDVSRA 434

Query: 480 ELVSTVKKILQE 491
           EL++ +K+   E
Sbjct: 435 ELIAEIKRRTSE 446


>gi|260890441|ref|ZP_05901704.1| histidine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860061|gb|EEX74561.1| histidine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 177

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 2/155 (1%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDRPN 67
             + +G  D  + +++  + I+D+ ++++E YGF+ I TP+LE ++   + +  + D  +
Sbjct: 2   ISVLKGMKDRYSDDVKKYDLIVDTAKSVFEKYGFERIITPILEETELFRRGVGDETDVVS 61

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC-RTYRIGPVFRNEKHGPGRFR 126
           K ++   D   + +++R + TA + R   E       P  + +  GP++R E    GRFR
Sbjct: 62  KEMYEFVDKGNRNVTMRPEGTAGVVRAYLEAGFHKSSPIVKWFYNGPMYRYEAPQKGRFR 121

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
           +F Q  ++  G  +   DAE+  M  + LE +GI 
Sbjct: 122 EFHQMGIEMFGVRSAYLDAEIIQMGCEFLEKLGIT 156


>gi|228920214|ref|ZP_04083562.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228839413|gb|EEM84706.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 420

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 76/433 (17%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +  +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIQDEEER-----------VLRTYIESKNYAALSNFIREKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  + E +   GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEMYETIEMLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  + +    +         + ++ + L++ +    +LR  G  A + L S  N  + 
Sbjct: 323 ALQEQQEAYERNQID-----IVIHYELNRLAEAERLRNLLRKDGKNAWLSLFS--NLSDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIGTVV 388


>gi|228964471|ref|ZP_04125583.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228795173|gb|EEM42667.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 388

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 77/428 (17%), Positives = 169/428 (39%), Gaps = 45/428 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRLTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEVIGIDNVRAEIECVISVIQALQKLNVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  + E +   GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEMYETMETLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F  + +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFG-ETLPAVGLALQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +         + ++ + L++ +    +LR  G  A + L S  N  + 
Sbjct: 323 ALQEQQEPYERNQID-----IVIHYELNRLAEAERLRNLLRKDGKNAWLSLFS--NLSDT 375

Query: 421 LKYADRRN 428
            ++A +  
Sbjct: 376 FQFARKNK 383


>gi|52787421|ref|YP_093250.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           licheniformis ATCC 14580]
 gi|163119667|ref|YP_080824.2| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           licheniformis ATCC 14580]
 gi|319647898|ref|ZP_08002116.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus sp.
           BT1B_CT2]
 gi|81825176|sp|Q65EF7|HISZ_BACLD RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|52349923|gb|AAU42557.1| HisZ [Bacillus licheniformis ATCC 14580]
 gi|145903177|gb|AAU25186.2| histidyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|317390239|gb|EFV71048.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus sp.
           BT1B_CT2]
          Length = 391

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 93/401 (23%), Positives = 159/401 (39%), Gaps = 45/401 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D        + ++  S+  +   +G+  +ETP LE+ D+           ++
Sbjct: 4   FEKPHGMRDTLPMLYETKKKVRSSLTEVMALWGYQFMETPALEFYDT---VGVQSAILDQ 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D +GQ + LR D+TAP+AR  A        P R      VFR ++   GR  +F
Sbjct: 61  QLFKLLDQEGQTLVLRPDMTAPIARVAASKLHKDDHPLRVGYAANVFRAQEREGGRPAEF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G  + +ADAE+  ++  +L+  G+    + I I +  ILD +  ++  + + 
Sbjct: 121 EQVGVELIGDGSTSADAEVIALVIFSLKNAGLTS--FKISIGHVGILDALFVEVLGNEER 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                                 ++  L E       +  K  NL+S     ++  L +  
Sbjct: 179 AHV-------------------LRRYLYEKNYVGYREHVKSLNLSSIDKSRLLELLELRG 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                     +  +  G++   EL  + E +   G   + IK+   +V  + YYTG ++E
Sbjct: 220 GIETCSRAASIVDSEKGKRAVLELETLWETLGDYGCTDD-IKLDLGMVSHMSYYTGVLFE 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                              +G GGRYD L+ RF     PATGF I   RL+ ALK  E  
Sbjct: 279 IYAENVGF----------PIGNGGRYDQLLGRFD-SPAPATGFGIRTDRLLEALKPAEEQ 327

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                      I  +   ++   +   + +  R  G +  M
Sbjct: 328 E---------KIDVVIFSTEQRKEAIRFAEEERRKGKKVVM 359


>gi|229172142|ref|ZP_04299707.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           MM3]
 gi|228611485|gb|EEK68742.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           MM3]
          Length = 420

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 171/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLGRGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR           P +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLAR--VMGTQRWDTPLKLTYGGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ V ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGIDNVRAEIECVISVIQSLQKVKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHEEEER-----------VLRTYIESKNYAALSNFIREKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +                + ++ + L++ +    +L+  G + E+ L S  N  + 
Sbjct: 323 ALQEQQEPYERKGID-----IIIHYELNRLAEAERLRNLLQKDGKKVELSLFS--NVKDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|188586612|ref|YP_001918157.1| Histidine--tRNA ligase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351299|gb|ACB85569.1| Histidine--tRNA ligase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 409

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 86/422 (20%), Positives = 156/422 (36%), Gaps = 45/422 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P G  D     +     + + I   ++ +G+D +  P +EYS+     +  E+   +
Sbjct: 9   LQKPSGVNDNLPNRVEKFRLLENKILETFKLWGYDEVSVPYIEYSNIF--SVNKENLLEQ 66

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F   D+ G+ + LR D T  +AR VA  +     P R    G +FR         ++ 
Sbjct: 67  QMFQFNDETGRLVVLRPDFTPSIARLVATYYKNHPLPLRLCYSGKIFRANNGNSINEKEQ 126

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G  A   DAE+  M A+T + + IK  ++ I I N K ++ +L+ + +    
Sbjct: 127 TQVGVELIGGEAPGGDAELVAMAAETFQKMEIK--NFVICIGNLKFINNLLDCLKVDQSS 184

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +                     +   L E              L S+  DI+        
Sbjct: 185 QSM-------------------LIEALNENNLVQYQGIIDSLELESDSKDILKKLPKFRG 225

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            K        V G        +EL  I + +   G   +++    ++VR L+YYTG + E
Sbjct: 226 NKENLNYVREVAGFKPVMNILDELENIFKTLESYG-LQDKVTFDLSLVRKLDYYTGFIME 284

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                              + GGGRYD L+ ++   ++PATGF+     LI  +K    +
Sbjct: 285 GYAEKVGF----------PLCGGGRYDKLMDKYGM-SLPATGFAFSFDSLIDLVKVKGDA 333

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            + +            +      +   + +  R  G R  + L S +      + A  + 
Sbjct: 334 LSKLH---------FGYTQGKRDQALEHVKDYRQRGYRVSLELNSQE-LEVSRRKAKEQG 383

Query: 429 CP 430
             
Sbjct: 384 AD 385


>gi|301117480|ref|XP_002906468.1| histidyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262107817|gb|EEY65869.1| histidyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 198

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 1/154 (0%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPNK 68
              RG  D    + +    +LD ++   + YGF  I+TPLLEY+D   + L D  D   K
Sbjct: 31  SRVRGTRDLLVDDTQQHREVLDVLKCTVDRYGFRAIQTPLLEYTDLFSRSLGDGSDIVMK 90

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +++ +D+ G+ ++LR + TA + R +  N      P +    G +FR E+   GR+R+F
Sbjct: 91  EMYTFKDNSGKSVTLRPEGTAGIMRALVSNNLMFSLPHKVSYSGSMFRYERPQRGRYREF 150

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
            Q  V+ VGS+  + D E+  M AD L+A+GIK 
Sbjct: 151 QQFGVEFVGSTGPSVDTEVIAMAADALDALGIKH 184


>gi|311070001|ref|YP_003974924.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           atrophaeus 1942]
 gi|310870518|gb|ADP33993.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           atrophaeus 1942]
          Length = 391

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 82/401 (20%), Positives = 152/401 (37%), Gaps = 45/401 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D        + ++  S+  I E +G+  +ETP LE+ D+            +
Sbjct: 4   FEKPHGMRDTLPGLYETKKKVRSSLTEIIEKWGYQFMETPTLEFYDT---VGVQSAIEEQ 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D DG+ + LR D+T P+AR  A        P R      VFR ++   GR  +F
Sbjct: 61  QLFKLLDQDGKTLVLRPDMTGPIARVAASKLHKQDHPLRIGYAANVFRAQEREGGRPAEF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G    +ADAE+  ++   L+  G+    + I I +  + D +  ++  + + 
Sbjct: 121 EQVGVELIGDGTTSADAEVIALVVGALKNTGL--GSFKIAIGHAGLADALFVEVLGNAER 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                                 ++  L E       +  K   L+S     ++  L +  
Sbjct: 179 A-------------------DVLRRFLYEKNYVGYREHVKSLPLSSIDKSRLLELLKLRG 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +    E + G++ G+   +EL  + +++   G   N ++    +V  + YYTG ++E
Sbjct: 220 GTEICAKAEEIVGSVQGKSVVDELKALWDILEDYGCTEN-VRFDLNMVSHMSYYTGILFE 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                            G V G G     +        PATGF + I R+I AL      
Sbjct: 279 VYAA-----------NVGFVVGSGGRYNKLLGHFDAPAPATGFGLRIDRMIEAL------ 321

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                +     +  +    +  ++   + +  R  G +  +
Sbjct: 322 ---HVKDETCEMDAVIFSKEQRAQAIAFAEEERLKGRKIVL 359


>gi|170694779|ref|ZP_02885930.1| Histidine--tRNA ligase [Burkholderia graminis C4D1M]
 gi|170140410|gb|EDT08587.1| Histidine--tRNA ligase [Burkholderia graminis C4D1M]
          Length = 148

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 2/122 (1%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           KK   +    +G  D   +E  +      +++++  +YG+  I TP++E++    + + +
Sbjct: 5   KKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIVEHTQLFTRGIGE 64

Query: 63  -EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             D   K ++S  D  +G+ +++R + TA + R   E+      P R + IG +F +E+ 
Sbjct: 65  VTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGSMFGHERP 124

Query: 121 GP 122
             
Sbjct: 125 QR 126


>gi|160934105|ref|ZP_02081492.1| hypothetical protein CLOLEP_02968 [Clostridium leptum DSM 753]
 gi|156866778|gb|EDO60150.1| hypothetical protein CLOLEP_02968 [Clostridium leptum DSM 753]
          Length = 409

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 82/443 (18%), Positives = 159/443 (35%), Gaps = 47/443 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+    P G  D   +E      I   +  ++++ GF  + TP LEY D   +  
Sbjct: 12  MKKYCKI---TPEGTRDLLFEECLTYRNIEKLLAGVFQSRGFHEVITPGLEYYDVFSQ-- 66

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +   P + +F + D+ G+ + +R D T P+AR  A      + P R +    V+ N   
Sbjct: 67  GESSIPQEFMFKVTDNKGRLMVVRPDSTLPIARLTATRLQNELKPLRLFYTQKVYHNYPS 126

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +  Q  ++ +G+S   AD E+     + L        DY I + +      + +
Sbjct: 127 LRGRNNEINQSGIELLGASGVRADLEVLSTAVEALSRC---VPDYRIELGHAGFFRALAK 183

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++ +  + +                   + ++  + +               +   + I 
Sbjct: 184 ELPIDDEVR-------------------ETIRSSIEQKNYAALDTILDRLEQSQAVLAIR 224

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                   E+   E + L       ++    L  + + + K G   N++ I   IV   +
Sbjct: 225 RLPRLFGGEEVFDEAFGLCSEIQEAQEPLEYLKGLYQKLAKLGMG-NKLMIDLGIVHRND 283

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+G V+   +               ++  GGRYD L+  F    +PA GF+I I+ L  
Sbjct: 284 YYSGIVFSGYV----------LGSGDAILSGGRYDRLLEAFD-SPMPAIGFAIDINALTK 332

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +    +  +            +  D     K   Y+  ++ +G+  E  +  ++     
Sbjct: 333 LMMDRGNLPSQKSAD-----VLIHGDDGYEIKALDYSNSMKMSGLCCENSVLQTR--EAA 385

Query: 421 LKYADRRNCPLAIIQGTGERSRG 443
           + YA  +  P     G  E    
Sbjct: 386 VDYAKTKKIPRVDFVGA-EIETK 407


>gi|148273448|ref|YP_001223009.1| histidyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831378|emb|CAN02336.1| hisS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 435

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 116/421 (27%), Positives = 179/421 (42%), Gaps = 50/421 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +   PRG  D    E   R + L  IR  Y  +GFD IETP++E S  L   L  ++   
Sbjct: 4   QITPPRGMRDFLPAEKARREQALAIIRRTYRAHGFDEIETPVVEESGRLHAGLGGDN--E 61

Query: 68  KGVFSLQDDD------------GQWIS-----LRYDLTAPLARYVAENFDTIVFPCRTYR 110
           K  +S+                G  ++     LR+DLT PLAR+ A +   +    R+ +
Sbjct: 62  KLAYSVLKRGLSVDDLHAAADAGDVLALSDLGLRFDLTVPLARFYASHRAELPGVFRSIQ 121

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
             PV+R E+   GR+RQF+QCD+D +G + + A+ E+    A       +      I +N
Sbjct: 122 AAPVWRAERPQKGRYRQFMQCDIDIIGEAGQLAEVELISATAA--TLAALGLTGCTIRVN 179

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           +R+IL GIL+  G   + +       L +IDKLDK G  GV   L EG  D        A
Sbjct: 180 DRRILAGILDSCGFATERQAQA----LISIDKLDKIGAAGVVAELAEGGAD-------AA 228

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            +    ++ +   L+        E    +           +L  +++ +     +   ++
Sbjct: 229 AVLGGILERIEPALADGGVPLTAEAITGILPDGVDPDAVADLETLADAL-VGLPDGVTLR 287

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              T+VRG+ YYTG ++E             P    SVGGGGRYDG++ RF GQ+VPA G
Sbjct: 288 FDPTLVRGMGYYTGTIFEI----------AHPASGSSVGGGGRYDGMIGRFLGQDVPAAG 337

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           FSIG  R++                    I  +      ++        L  +G R  + 
Sbjct: 338 FSIGFERIVDL-------AVLPAAEDADAIALVHDRRTPVAALARLKAELVASGRRVRLE 390

Query: 411 L 411
            
Sbjct: 391 P 391


>gi|196249366|ref|ZP_03148064.1| histidyl-tRNA synthetase 2 [Geobacillus sp. G11MC16]
 gi|196211123|gb|EDY05884.1| histidyl-tRNA synthetase 2 [Geobacillus sp. G11MC16]
          Length = 388

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 165/406 (40%), Gaps = 45/406 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D       ++ ++  ++    E +G++ IETP LEY +++G      D    
Sbjct: 2   FEKPLGMRDTLPFLYEMKKQVRRTMAEEIERWGYEFIETPTLEYYETVGTASAIADH--- 58

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D  G  + LR D+TAP+AR  A        P R      VFR ++   GR  +F
Sbjct: 59  RLFKLLDQQGHTLVLRPDMTAPIARVAASRLYEDSNPLRLAYNANVFRAQQREGGRPAEF 118

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G     ADAE+  +MA  L+ VG+ R  + + + +   ++ +  +I  + + 
Sbjct: 119 EQIGVELIGDGTVMADAEVISLMAALLKRVGLSR--FSVAVGHIGYVNALFLEILGNEER 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                                 ++  L E       +  K   L+S     ++  LS+  
Sbjct: 177 ASV-------------------LRRFLYEKNYVGYREHVKSLPLSSIDQKRLLDLLSLRG 217

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                E  + +  +  G++  +EL  +   ++  G  S  +K+   +V  + YYTG ++E
Sbjct: 218 GSEAIEAAKALVTSEEGQRAADELAALLAALKTYGV-SEAVKLDMALVSHMSYYTGILFE 276

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                              +G GGRYD L+++F  +  PATGF + + RLI A+   +  
Sbjct: 277 VYAEQVGF----------PIGNGGRYDDLLAKFS-RPAPATGFGLRVDRLIEAIGETDVR 325

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
                      I  +    + L++     +  R  G R  +   + 
Sbjct: 326 G---------EIECIVFSQERLAEAVELAEAKRAEGQRVVLQHITG 362


>gi|160936537|ref|ZP_02083904.1| hypothetical protein CLOBOL_01427 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440328|gb|EDP18073.1| hypothetical protein CLOBOL_01427 [Clostridium bolteae ATCC
           BAA-613]
          Length = 437

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 110/434 (25%), Positives = 178/434 (41%), Gaps = 49/434 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M    K       G  D    E++IR  +++ I+  Y+++GF  IETP +E+  +L    
Sbjct: 17  MALAKKPVT----GMRDITPAEMQIREYVMNQIKETYKSFGFTQIETPCVEHIGNLTSKQ 72

Query: 61  PDEDRPNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCR 107
             ++   K +F +     +                LRYDLT PL+RY A N   +  P +
Sbjct: 73  GGDN--EKLIFKILKRGDKLNLEGSKEENDLVDSGLRYDLTLPLSRYYANNAANLPSPFK 130

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
             ++G V+R ++   GRFRQF+QCD+D +G +   A+ E+ +     L  +      + +
Sbjct: 131 ALQMGSVWRADRPQKGRFRQFVQCDIDILGDATSLAEIELILATTTALGRICPDNG-FTV 189

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            IN+R IL G+    G   +        V   +DK+DK G +GV+  L E          
Sbjct: 190 RINDRGILRGMALYCGFAEES----MDQVFITLDKMDKIGYEGVEKELLES--------- 236

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE-LVVISELVRKSGYNS 286
                + E +   +  L    + S          +       +E L  I + V +     
Sbjct: 237 ---GHSPESVSKYLDMLKNVTKDSAGVRALGQMLSEVMPADVSEGLAHIMDTVTEVAEAD 293

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             ++   T+VRG+ YYTG ++E                 GSV GGGRYD ++ +F G   
Sbjct: 294 FGLEFDPTLVRGMSYYTGTIFEV----------SMEGFGGSVAGGGRYDKMIGKFTGMET 343

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           PA GFSIG  R++  L      T          +     DS  L+         R  G++
Sbjct: 344 PACGFSIGFERIVTILMD-NGFTVPGASDRKAFLFEKGVDSARLAAVIREAMEERKKGVQ 402

Query: 407 AEMF-LGSSKNFGN 419
             +  +  +K F  
Sbjct: 403 VLVAQMNKNKKFQK 416


>gi|188587803|ref|YP_001922012.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188498084|gb|ACD51220.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 382

 Score =  133 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 85/413 (20%), Positives = 165/413 (39%), Gaps = 44/413 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+      LP G  D    E  I+  +  SI +++ N+G+  + TP LE+ ++   + 
Sbjct: 1   MNKRNI----LPEGTRDLVLNECEIKRHLEKSIDDLFSNWGYREVITPTLEFYETF-NYY 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           P+  R  + V+   D+ G+ + LR D+T P+AR V+        P R   I  VFR  + 
Sbjct: 56  PESLR-EEEVYKFFDNKGRILVLRPDMTIPIARLVSTKLKGEALPIRIRYISKVFRVHES 114

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  ++  C ++ VGS     D E+ ++  ++L+ +G+K  ++ + I N +  +    
Sbjct: 115 LGGRRNEYTDCGIELVGSDGIDKDLEILVLALESLKKMGLK--NFKLEIGNIEFFNSAFN 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + +  ++K                   + +  L+      N  +F K  ++  E     
Sbjct: 173 DLNISNENK-------------------ENIAKLIEGKNLKNLENFLKSLDIKEEYRKFF 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +   + + E  + +        G + L  +   + + GY  N I     +V  L 
Sbjct: 214 NKLPWMFGNRKVLEEGKKLAFNKDLLNGISYLEELYIQLEELGYKEN-ITFDLGMVPKLN 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++         N          +  GGRY+ L+  +   ++PA GFSI +  +++
Sbjct: 273 YYTGIIFRGYGEDIGDN----------ILAGGRYNKLIKSYG-VDLPAIGFSIDVDLVVI 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                       ++M           +  + +    ++ LR  G   E+F   
Sbjct: 322 NNIDNNEIIEKNRDMYKFFY-----GNKDVVQAIRKSEELRKQGKVVELFYDE 369


>gi|207092772|ref|ZP_03240559.1| histidyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 209

 Score =  133 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 125/213 (58%), Gaps = 10/213 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+++L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAEALLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+  
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIVASLKALDL--EDFCVSINHRKILNGICEYFGIS- 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                +   VLR +DKL+K GL GV+  L +  
Sbjct: 177 -----QVNEVLRIVDKLEKIGLNGVEEELKKEC 204


>gi|51893977|ref|YP_076668.1| histidyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826022|sp|Q67KH4|HISZ_SYMTH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|51857666|dbj|BAD41824.1| histidyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 399

 Score =  133 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 79/404 (19%), Positives = 151/404 (37%), Gaps = 40/404 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R ++P G  D    E     R+   + N++  +G+  + TP++EY +++     +  R  
Sbjct: 7   RTQVPDGVRDRLPSEAAAMRRLSARLDNVFRAWGYREVSTPVIEYLEAVAAGAANWGR-R 65

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++   D  G+ ++LR D+T P+AR +A        P R     PVFR+ +   G   +
Sbjct: 66  EDLYQFFDRKGRTLALRPDMTTPIARLMATRLADEPLPLRLSYFAPVFRHRELRAGATSE 125

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q  V+ VG+  E ADAE+  +    + A  +    + IG+ +  +++G+ E  G+   
Sbjct: 126 IWQAGVELVGAPGEAADAEVISLACAAVRAADLTG--FRIGLGHVGVVEGLFESAGVDPQ 183

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                                  +K  +              A L+ E+ + +++ +   
Sbjct: 184 AAAV-------------------LKEAMVARDLVAFEQGVARAGLSGERAERLLALVHFH 224

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
              +   +           +    L  + E++   G    ++ +   +VR L YYTG V+
Sbjct: 225 GSYA-EAVARFGGVGGRVAEALQHLGRVLEVLEALGVAE-QVNLDLGLVRSLGYYTGVVF 282

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E  L          P +   V GGGRYD LV+ F          +     +   L + E 
Sbjct: 283 EGYL----------PGIGAPVLGGGRYDNLVAEFGR----PLAATGFALEVDRLLMAQEQ 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
                 E G   +       ++ +            G+  E+  
Sbjct: 329 QGALAAEPGLDAVIACPPGQEAAAMAWAARLR--AQGLAVEVDF 370


>gi|170782780|ref|YP_001711114.1| histidyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157350|emb|CAQ02537.1| probable histidyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 435

 Score =  133 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 112/371 (30%), Positives = 170/371 (45%), Gaps = 43/371 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +   PRG  D    E   R + L  IR  Y  +GFD IETP++E S  L   L  ++   
Sbjct: 4   QITPPRGMRDFLPAEKARREQALAIIRRTYRAHGFDEIETPVVEESGRLHAGLGGDN--E 61

Query: 68  KGVFSLQDDD------------GQWIS-----LRYDLTAPLARYVAENFDTIVFPCRTYR 110
           K  +S+                G  ++     LR+DLT PLAR+ A +   +    R+ +
Sbjct: 62  KLAYSVLKRGLSGDDLHAAADAGDVLALSDLGLRFDLTVPLARFYASHRAELPGVFRSIQ 121

Query: 111 IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
             PV+R E+   GR+RQF+QCD+D +G + + A+ E+    A       +      I +N
Sbjct: 122 AAPVWRAERPQKGRYRQFMQCDIDIIGEAGQLAEVELISATAA--TLAALGLTGCTIRVN 179

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
           +R+IL GIL+  G   + +       L +IDKLDK G  GV   L EG  D        A
Sbjct: 180 DRRILAGILDSCGFAAERQAQA----LISIDKLDKIGATGVVAELAEGGAD-------AA 228

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            +    ++ +   L+        E    +           +L  +++ +     +   ++
Sbjct: 229 AVLGGILERIEPALADGGVPLTTEAITAILPAGVDPDAVADLETLADAL-VGLPDGVTLR 287

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
              T+VRG+ YYTG ++E             P    SVGGGGRYDG++ RF GQ+VPA G
Sbjct: 288 FDPTLVRGMGYYTGTIFEI----------AHPASGSSVGGGGRYDGMIGRFLGQDVPAAG 337

Query: 351 FSIGISRLIVA 361
           FSIG  R++  
Sbjct: 338 FSIGFERIVDL 348


>gi|260589627|ref|ZP_05855540.1| histidyl-tRNA synthetase [Blautia hansenii DSM 20583]
 gi|331083059|ref|ZP_08332176.1| hypothetical protein HMPREF0992_01100 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260539867|gb|EEX20436.1| histidyl-tRNA synthetase [Blautia hansenii DSM 20583]
 gi|330405061|gb|EGG84598.1| hypothetical protein HMPREF0992_01100 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 419

 Score =  133 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 190/456 (41%), Gaps = 57/456 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   +E+ IR+ ++  I++ Y+ +GF  +E P +E+ ++L      ++  
Sbjct: 3   LKKKPVTGMKDILPQEMEIRDYVIGLIKDTYKQFGFTSMEAPCVEHIENLTSKQGGDN-- 60

Query: 67  NKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL R+ + N + +  P +   IG 
Sbjct: 61  EKLIFRILKRGEKLKIEEAKEENDLVDSGLRYDLTVPLCRFYSNNANELPQPFKALHIGN 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           VFR ++   GRFRQF+QCD+D +G     A+ ++ +  +  +  +    + + I IN+R+
Sbjct: 121 VFRADRPQRGRFRQFMQCDIDILGDPTFLAEIDVILATSTLVGKLDF--DSFTIRINDRR 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL  +    G   D        V   +DK+DK G+ GV   L E                
Sbjct: 179 ILKAMAAYSGFPEDS----FTQVFIILDKMDKIGMDGVAKELEES------------GFA 222

Query: 234 SEQIDIMVSFLS--IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E ++  +       +    +    E ++G +  +   ++L  I E V ++   +  ++ 
Sbjct: 223 KESVEKYMDLFKAMGNGIDGVAYCKEKLEGFLDAKVA-DDLTTIIESVMQAKTANFNLEF 281

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E  +     +               RYD ++ +F G   PATGF
Sbjct: 282 DPTLVRGMSYYTGPIFEISIDGFAGSVGGGG----------RYDEMIGKFTGTPTPATGF 331

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG  R+++ L           +   V +      ++ L +        R AG    +  
Sbjct: 332 SIGFERIVMLLMERG-FKVPGAKEKKVYLLDKKLSNEKLLEVMKKAAEERKAGQSINIAY 390

Query: 412 -GSSKNFGN-QLKYADRRNCPLAIIQGTGERSRGML 445
              +K F   QL   ++     A+I    E     +
Sbjct: 391 AKKNKKFQKEQL---EKEG--YAVI---TEVYNDTV 418


>gi|228984582|ref|ZP_04144757.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229155071|ref|ZP_04283184.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           ATCC 4342]
 gi|228628356|gb|EEK85070.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           ATCC 4342]
 gi|228775109|gb|EEM23500.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 420

 Score =  133 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR           P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLAR--VMGAQRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHEEEEK-----------VLRTYIESKNYAALSNFIREKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G + E+ L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVELSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|212640357|ref|YP_002316877.1| ATP phosphoribosyltransferase regulatory subunit [Anoxybacillus
           flavithermus WK1]
 gi|212561837|gb|ACJ34892.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
           [Anoxybacillus flavithermus WK1]
          Length = 394

 Score =  133 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 88/406 (21%), Positives = 158/406 (38%), Gaps = 45/406 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D      + +  + +++    E +G+  IETP LEY ++           ++
Sbjct: 6   FEKPLGMRDTLPDVYKTKRTLREAMMAEMETWGYSFIETPTLEYDET---VGAASAILDQ 62

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D +G  + LR D+TAP+AR  A        P R      VFR ++   GR  +F
Sbjct: 63  QLFKLLDREGHTLVLRPDMTAPIARLAASKLYKEGCPLRLAYAANVFRAQQREGGRPAEF 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G     ADAE+  +M   L+  G++  D+ + I +   +D +   I      
Sbjct: 123 EQVGVEYIGDGTMYADAEVISLMIFALKRAGLR--DFTVTIGHIGYVDALFFDILRQEQR 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                              ++ ++  L E       +  K   L+S   D ++  L++  
Sbjct: 181 -------------------VETLRRFLYEKNYVGYREHVKSLPLSSIDQDRLLRLLTLRG 221

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +           T A  +  +EL  +   + + G   + +K+  ++V  + YYTG ++E
Sbjct: 222 GEKAIGEARSYATTEAERQALDELEQLWTYIEQYGV-IDMVKLDMSLVSHMSYYTGVLFE 280

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                              +G GGRYD L  +F  +  PATGFS+ + RL+ A+      
Sbjct: 281 VYAKNVGF----------LLGNGGRYDELFGKF-HRPSPATGFSVRLDRLMEAIGEQHRR 329

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
                       T M    +  ++       +R  G +  +   + 
Sbjct: 330 EKT---------TCMIFSQERFAEAYAKAAEMRKKGEKVVLQHVAG 366


>gi|320120579|gb|EFE29063.2| histidine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 396

 Score =  133 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 118/447 (26%), Positives = 192/447 (42%), Gaps = 66/447 (14%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            KL ++  +G  D   +++++RN +   I   Y + G+  IETP+LE  D+L      E+
Sbjct: 2   QKLSSKPAKGTQDLLPQDMKLRNWVTKKIIEAYTSRGYTQIETPMLENLDNLTNSEGGEN 61

Query: 65  RPNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRI 111
                +F +     +              + LR+DLT PL+R+ A N + +  P + ++I
Sbjct: 62  LRM--IFKVLKRGEKLDWSKAQTENDLSDLGLRFDLTLPLSRFYANNMNELTKPFKAFQI 119

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
           G VFR E++  GR+RQF+QCD+D +G S   A+ ++ + +   L  +G K  D+ I +N+
Sbjct: 120 GNVFRAERNQKGRYRQFVQCDIDTLGDSGIYAEIDLMLTVPKALYNIGFK--DFVIKLND 177

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
           R+IL  ++   G   +D       V    DK DK G +GV   L E              
Sbjct: 178 RRILKDLVIDAGFAEED----FETVCITADKKDKIGEEGVVKELLEK------------G 221

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
              E I   +  L+  LE+      E +K                 L+         I+ 
Sbjct: 222 YAEETIKRFLENLTTPLEQLTTPYAEDLK-----------------LLTSIISKYYPIQF 264

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
            +T+VRG+ YYTG ++E             P   G+V GGGRYDGL+++F  +++PA GF
Sbjct: 265 DATLVRGMGYYTGPIFEIET----------PKFGGAVAGGGRYDGLLNKFSKESIPAVGF 314

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG  R+I  LK         +E        +  +     K           G  A ++ 
Sbjct: 315 SIGFERIIGILKDQNFVVPEERE----TYAILFAEDSFYEKALTIANEKIEQGNIASIYK 370

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTG 438
             S   G   + A+ +     +I    
Sbjct: 371 IKSNRIGK--EVANFKKSGYEVIVADE 395


>gi|229016759|ref|ZP_04173689.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH1273]
 gi|229022963|ref|ZP_04179481.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH1272]
 gi|228738343|gb|EEL88821.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH1272]
 gi|228744495|gb|EEL94567.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH1273]
          Length = 420

 Score =  133 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 78/433 (18%), Positives = 167/433 (38%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR           P +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLAR--VMGTQRWDTPLKLTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 HSGKYNEIVQSGIEIIGIDNVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +  +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIRDEEES-----------VLRTYIESKNYAALSNFIREKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      K    +       + + L++ +    +L+  G + E+ L    N    
Sbjct: 323 ALQEQQEPYERKKIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVELSLF--PNLNET 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNKIVTVV 388


>gi|47566293|ref|ZP_00237321.1| histidyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47556846|gb|EAL15177.1| histidyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 420

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR           P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLAR--VMGAQRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHEEEEKI-----------LRTYIESKNYAALSNFIREKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGIIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G + E+ L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVELSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|57234391|ref|YP_181573.1| histidyl-tRNA synthetase, putative [Dehalococcoides ethenogenes
           195]
 gi|109892208|sp|Q3Z876|HISZ_DEHE1 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|57224839|gb|AAW39896.1| histidyl-tRNA synthetase, putative [Dehalococcoides ethenogenes
           195]
          Length = 412

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 79/402 (19%), Positives = 158/402 (39%), Gaps = 47/402 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G +D   +++     I     +    +G++ + TP+LEY            +  K V+S
Sbjct: 6   KGCSDLLPEDMLRFRYIESIFHDSCITWGYEEVRTPMLEYLSLFTSSGTLTPQMLKRVYS 65

Query: 73  LQDDD---GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             D D   G+ + LR D T P AR   +N   +    R      +FR ++ G  + R+  
Sbjct: 66  FLDWDGWSGERVVLRPDGTIPAARLYIDNLQEME-VARLCYTSNIFRFDETGK-KSRENW 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   + +G +   A+AE+  +  +TL  +G    D  + +++ +++  +L ++  + D++
Sbjct: 124 QLGAEIIGVTGSEANAELITLALETLSRLGF--EDVELRLSHSQLIKAVLAQLEPNADEQ 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 +L     L                     +  +   L  E      +FL     
Sbjct: 182 HKIFDQLLDGDVALMSRLEAE------------KPELFRTLKLLMENKGTSAAFLK---- 225

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
              + +          E+  N+ +   +++ K G      +I     +G EYYTG ++  
Sbjct: 226 ---NVMAMAGAAGGDLEEPLNDFIAGVDVLDKLG---VSYQIDLASGKGFEYYTGVIFHL 279

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +    +             GGGRYD L+    G + PA GF++ ++RLI  + + +   
Sbjct: 280 FVNGEHVG------------GGGRYDKLIPLLGGPDKPAAGFALYLNRLIPMIDAEDMYD 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              ++        + ++ D+L        ++R  GI AE+F 
Sbjct: 328 MVEEK------ILIKYEGDNLKNAYEMANLIRECGISAELFY 363


>gi|322805877|emb|CBZ03442.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           botulinum H04402 065]
          Length = 422

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 86/445 (19%), Positives = 178/445 (40%), Gaps = 50/445 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G  D   +E  I+  I D +R IY+  GF  I +P +E+ D     +  +  P + +
Sbjct: 8   IPEGMKDILFEESNIKLNIEDQLRKIYKYSGFSEIISPTIEFYDVFNSNI--QAIPQEKM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D+ G+ + LR D+T P+ R          +P +      +FR  +   G+  +  Q
Sbjct: 66  YKLFDNLGRILVLRPDMTTPIGRITGTKMKDCTYPLKLCYTANIFRVNEKLNGKRGEITQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G++   +D +  +   + L ++G+K  ++ I +        + E I +  +   
Sbjct: 126 SGIEIIGTNGIKSDVDSIVTAINALLSLGLK--NFKIELGEAGFFQALTENIEIKEE--- 180

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG--ANLTSEQIDIMVSFLSIDL 248
                            L+ +K ++          F     +  + E  +++ +   +  
Sbjct: 181 ----------------NLKKLKEIIRNKNYVALKKFLDEISSKYSKEDFELIKNLPKLFG 224

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +  + E  + +       K  +++  I + +   G     I I   +V+ ++YYTG +++
Sbjct: 225 DIKIIEKAKALTKNKKALKSLDDIHNIYKSIENIG-LEAYISIDLGMVQNIDYYTGVIFK 283

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +               S+  GGRYD L+  F    +PATGF+I +  +++ALK   + 
Sbjct: 284 GYVEEVG----------DSILSGGRYDNLIQHFGI-ELPATGFAINVDDIMIALKKQNTM 332

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
           + +  +        + +  + L K   + Q L+   I  E+ L         L Y+ ++ 
Sbjct: 333 SMDKDKK-----VLIFYKEEFLRKAYDFMQELKMKKIICELSLLDDD--KEILLYSKKKG 385

Query: 429 CPLAI-IQGTGERSRGMLQIKDLAK 452
               I   G        L +KDL  
Sbjct: 386 IDFIIGFMGEE-----KLFVKDLKS 405


>gi|229166345|ref|ZP_04294102.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH621]
 gi|228617087|gb|EEK74155.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH621]
          Length = 420

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 81/433 (18%), Positives = 176/433 (40%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++ L D+ G+ I LR D+T PLAR +      I    +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKLFDEKGRIIVLRPDMTIPLARVIGTQRGDIP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGIENVRAEIECVISVIQALQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++   R  +             G+   + E + D             E + ++
Sbjct: 172 KLSIHDEEEKLLRTYIESKNYA-------GLLNFIEEKKLDRC----------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + + GY S  I I   +V+ L+
Sbjct: 215 EKLPRLFGSLDVVEEAEKLASSNEMKMAIARVKEIYETIEQLGYGS-YISIDLGMVQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-MPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G  A++ L S  N  + 
Sbjct: 323 ALQEQQEPYKRKRIEIMIHY-----ELNRLAEAERLRNLLQKDGKNAQLSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A++      +
Sbjct: 376 FQFANKNKIMTVV 388


>gi|331090441|ref|ZP_08339322.1| hypothetical protein HMPREF1025_02905 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330401188|gb|EGG80781.1| hypothetical protein HMPREF1025_02905 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 416

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 110/429 (25%), Positives = 189/429 (44%), Gaps = 48/429 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ +R+ ++  I+  Y+ +GF  +ETP +E+ ++L      ++  
Sbjct: 3   LKKKPVTGMKDMMPAEMEVRDYVIGLIKETYKTFGFSSMETPCVEHIENLCSKQGGDN-- 60

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY A + + +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLKLDTAKEEADLVDGGLRYDLTVPLSRYYANHANELPSPFKALQMGN 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G  +  A+ E+ +     L  +  K  ++ I IN+R+
Sbjct: 121 VWRADRPQRGRFRQFMQCDIDILGEPSNLAEIELILATTALLGKLDFK--NFTIRINDRR 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L  +    G   +D       V   +DK+DK GL GV   L             G    
Sbjct: 179 FLKAMAAYSGFQEED----YDSVFITLDKMDKIGLDGVAAELK------------GNGYA 222

Query: 234 SEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E ++  +S      +  + +    E ++G +A E   + L +I   V        ++  
Sbjct: 223 EESVEKYLSLFEEITNDVEGVRLCKEKLQGYLAPEAA-DSLEMIITSVESQKEAEFKMSF 281

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQ+ PA GF
Sbjct: 282 DPTLVRGMSYYTGTIFEI----------SMDEFGGSVGGGGRYDKMIGKFTGQDTPAVGF 331

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-F 410
           SIG  R+++ L           +     +       + L +     +  R AG +  +  
Sbjct: 332 SIGFERIVMLLLERG-YEVPTSKPKKAFLIEKKLPQEKLLEVLEEARKEREAGRQVMIVN 390

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 391 MKKNKKFQK 399


>gi|291519372|emb|CBK74593.1| ATP phosphoribosyltransferase regulatory subunit [Butyrivibrio
           fibrisolvens 16/4]
          Length = 334

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 88/361 (24%), Positives = 152/361 (42%), Gaps = 34/361 (9%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
             L    P G  D    E   R  +L ++R  ++  G+ PI TP  EY ++  + +    
Sbjct: 2   KNLTLHTPEGVRDIYNSEYEQRLDVLYNLRKCFKESGYSPISTPTFEYLETFSREVGSC- 60

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +  +F   D DG  + LR D+T  +AR  A  F     P +    G VF N     GR
Sbjct: 61  -KSNEMFKFFDRDGNTLVLRPDITPSIARAAAMYFSDTDGPVKLSYEGNVFINYHSLQGR 119

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            ++  Q   + +G S+  ADAE+  ++ + L+ +G+K  ++ IG+ +  ++ G+++   L
Sbjct: 120 LKESTQAGCEFIGDSSVDADAEILTIVVNALKKIGLK--EFEIGVGHIDVVRGLIDAANL 177

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D +        R ID +      G K LL         + +KG     +    +    
Sbjct: 178 SEDKEE-------RLIDLISNKNFFGAKELL------QQEEVSKGLIELFDITGKI---- 220

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            ++  K      E  K           L  + +L+ K+    + I     ++   +YYTG
Sbjct: 221 -MNSPKEWAPYLEKAKKYKKVYDALEYLTKLYDLLNKNKVM-DYISFELGMISEYKYYTG 278

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++                V   +  GGRYD L+S F  ++ PA GF+I + +L++ALK 
Sbjct: 279 IIFTGY----------SYGVGEPLVKGGRYDSLLSLFG-KDSPAIGFAITVDQLMLALKR 327

Query: 365 L 365
           L
Sbjct: 328 L 328


>gi|187779772|ref|ZP_02996245.1| hypothetical protein CLOSPO_03368 [Clostridium sporogenes ATCC
           15579]
 gi|187773397|gb|EDU37199.1| hypothetical protein CLOSPO_03368 [Clostridium sporogenes ATCC
           15579]
          Length = 422

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 88/445 (19%), Positives = 178/445 (40%), Gaps = 50/445 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G  D   +E  I+  I D +R IY+  GF  I +P LE+ D     +  +  P + +
Sbjct: 8   IPEGMKDILFEESNIKLNIEDQLRKIYKYSGFSEIISPTLEFYDVFNSNI--QAIPQEKM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L DD G+ + LR D+T P+ R          +P +    G +FR  +   G+  +  Q
Sbjct: 66  YKLFDDLGRILVLRPDMTTPIGRITGTKMKDCTYPLKLCYTGNIFRVNEKLNGKLGEITQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G+    +D +  +     L ++G++  ++ I +    + + + E + +  +   
Sbjct: 126 SGIEIIGTKGIKSDVDSIVTAIHALLSLGLR--NFKIELGEAGLFEALTENMRIKEE--- 180

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG--ANLTSEQIDIMVSFLSIDL 248
                            L+ +K ++          F     +  +    +I+ +   +  
Sbjct: 181 ----------------NLKKLKEIIRNKNYVALKKFLDEIISKYSKNDFEIIENLPKLFG 224

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              + E  + +       K  N++  I + +   G  S  I I   +V+ ++YYTG +++
Sbjct: 225 GIEIIEKAKSLTKNEKALKSLNDIYNIYKSIEYIGLGS-YISIDLGMVQNIDYYTGVIFK 283

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +              GS+  GGRYD L+  F    +PA GF+I +  +++ALK   + 
Sbjct: 284 GYVEEVG----------GSILSGGRYDNLIQHFG-AKLPAIGFAINVDDVMIALKKQNTI 332

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
           + +  +        + +  + L K   + + L+T  I  E+           L Y+ ++ 
Sbjct: 333 SIDKDKK-----VLISYKDEFLRKAYDFMEELKTKKIICELSPLDDD--KEILIYSKKKG 385

Query: 429 CPLAI-IQGTGERSRGMLQIKDLAK 452
               I   G        L +KDL  
Sbjct: 386 IDFIIGFTGEE-----KLFVKDLKS 405


>gi|168180218|ref|ZP_02614882.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Clostridium botulinum NCTC 2916]
 gi|182668992|gb|EDT80968.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Clostridium botulinum NCTC 2916]
          Length = 422

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 87/443 (19%), Positives = 176/443 (39%), Gaps = 46/443 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G  D   KE  I+  I D +R IY+  GF  I +P +E+ D     +  +  P + +
Sbjct: 8   IPEGMKDILFKESNIKLNIEDQLRKIYKYSGFSEIISPTIEFYDVFNSNI--QAIPQEKM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D+ G+ + LR D+T P+ R          +P +      +FR  +   G+  +  Q
Sbjct: 66  YKLFDNLGRILVLRPDMTTPIGRITGTKMKDCTYPLKLCYTANIFRVNEKLNGKRGEITQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G++   +D +  +   + L ++G+K     +G        G  + +  + + K 
Sbjct: 126 SGIEIIGTNGIKSDVDSIVTAINALLSLGLKNFKIELGEA------GFFQALTENMEIKE 179

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                +   I   +   L+     +                 + E  +++ +   +  + 
Sbjct: 180 ENLKKLKEIIRNKNYVALKKFLDEISSKY-------------SKEDFELIKNLPKLFGDI 226

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E  + +       K  +++  I + +   G     I I   +V+ ++YYTG +++  
Sbjct: 227 KIIEKAKALTKNKKALKSLDDIHNIYKSIENIG-LEAYISIDLGMVQNIDYYTGVIFKGY 285

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +               S+  GGRYD L+  F    +PATGF+I +  +++ALK   + + 
Sbjct: 286 VEEVG----------DSILSGGRYDNLIQHFGI-ELPATGFAINVDDIMIALKKQNTMSM 334

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
           +  +        + +  +SL K   + Q L+   I  E+ L         L Y+ ++   
Sbjct: 335 DKDKK-----VLIFYKEESLRKAYDFMQELKMKKIICELSLLDDD--KEILLYSKKKGID 387

Query: 431 LAI-IQGTGERSRGMLQIKDLAK 452
             I   G        L +KDL  
Sbjct: 388 FIIGFMGEE-----KLFVKDLKS 405


>gi|282900140|ref|ZP_06308097.1| Histidyl-tRNA synthetase 2, putative [Cylindrospermopsis
           raciborskii CS-505]
 gi|281195022|gb|EFA69962.1| Histidyl-tRNA synthetase 2, putative [Cylindrospermopsis
           raciborskii CS-505]
          Length = 403

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 91/436 (20%), Positives = 167/436 (38%), Gaps = 53/436 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D    ++  +  I D ++ ++  +G+  I T  LE  D++      E   
Sbjct: 1   MVYQPAAGARDLLPLDVAQKRWIEDRLQQVFHRWGYHRIITSTLERMDTIMAG---EAID 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE-KHGPGRF 125
              V  LQ    + + LR +LTA +AR V        +P R Y    VFR   +      
Sbjct: 58  RHKVIQLQTGQDEELGLRPELTASIARTVVTRMAMAHYPQRLYYNANVFRRNWEKRHNHQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           +++ Q  V+ +G+    A+AE+ ++ ++ L A+G+  N +H+ +    I   +L      
Sbjct: 118 QEYYQAGVELLGAEGLLANAEVLLLTSNCLTALGL--NQWHLILGEAGITKSLLNAFPPE 175

Query: 186 GDDKLNERLIVLR--AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              ++   +  L   AID L           LGE     +         + + +  + +F
Sbjct: 176 IRSQVRMAIANLDSVAIDTLP----------LGEDLHKQARIMMDLRGKSGDVLQKVSNF 225

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                +                +   N L  + EL+   G  S  + +  ++++ ++YYT
Sbjct: 226 PLDSSQ----------------QAAVNHLKSLVELLEAEGKFS--LILDLSLIQTIDYYT 267

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVA 361
           G V+E +                 +G GGRYD L  +   + +N P  GF + I  L   
Sbjct: 268 GIVFEVV--------GDLNGQAQVLGRGGRYDQLLGLYHPRRENTPGIGFELSIDDLYQV 319

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGN 419
           L S +     I          +    ++      + Q LR +   +R EM LG  K+   
Sbjct: 320 LSSTQQLPQTIPSSNW---LVVPEGDNAQVAAFAHAQKLRDSTHLVRVEMELG-GKDPQG 375

Query: 420 QLKYA-DRRNCPLAII 434
             +YA +R    +  I
Sbjct: 376 VREYARERSIAQIVWI 391


>gi|153939879|ref|YP_001390910.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           botulinum F str. Langeland]
 gi|166219827|sp|A7GDQ0|HISZ_CLOBL RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|152935775|gb|ABS41273.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum F str. Langeland]
 gi|295318971|gb|ADF99348.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum F str. 230613]
          Length = 422

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 86/443 (19%), Positives = 176/443 (39%), Gaps = 46/443 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G  D   +E  I+  I D +R IY+  GF  I +P +E+ D     +  +  P + +
Sbjct: 8   IPEGMKDILFEESNIKLNIEDQLRKIYKYSGFSEIISPTIEFYDVFNSNI--QAIPQEKM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D+ G+ + LR D+T P+ R          +P +      +FR  +   G+  +  Q
Sbjct: 66  YKLFDNLGRILVLRPDMTTPIGRITGTKMKDCTYPLKLCYTANIFRVNEKLNGKRGEITQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G++   +D +  +   +TL ++G+K     +G        G  + +  + + K 
Sbjct: 126 SGIEIIGTNGIKSDVDSIVTAINTLLSLGLKNFKIELGEA------GFFQALTENMEIKE 179

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                +   I   +   L+     +                 + E  +++ +   +  + 
Sbjct: 180 ENLKKLKEIIRNKNYVALKKFLDEISSKY-------------SKEDFELIKNLPKLFGDI 226

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E  + +       K  +++  I + +   G     I I   +V+ ++YYTG +++  
Sbjct: 227 KIIEKAKALTKNKKALKSLDDIYNIYKSIENIG-LEAYISIDLGMVQNIDYYTGVIFKGY 285

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +               S+  GGRYD L+  F    +PATGF+I +  +++ALK   + + 
Sbjct: 286 VEEVG----------DSILSGGRYDNLIQHFGI-ELPATGFAINVDDIMIALKKQNTMSM 334

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
           +  +        + +  + L K   + Q L+   I  E+ L         L Y+ ++   
Sbjct: 335 DKDKK-----VLIFYKEEFLRKAYDFMQELKMKKIICELSLLDDD--KEILLYSKKKGID 387

Query: 431 LAI-IQGTGERSRGMLQIKDLAK 452
             I   G        L +KDL  
Sbjct: 388 FIIGFMGEE-----KLFVKDLKS 405


>gi|296330299|ref|ZP_06872780.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305676096|ref|YP_003867768.1| histidyl-tRNA synthetase component of ATP phosphoribosyltransferase
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152567|gb|EFG93435.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305414340|gb|ADM39459.1| histidyl-tRNA synthetase component of ATP phosphoribosyltransferase
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 391

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 84/401 (20%), Positives = 154/401 (38%), Gaps = 45/401 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D        + ++  S+ ++ + +G+  +ETP LE+ D+            +
Sbjct: 4   FEKPHGMRDTLPGLYETKKKVRQSLTDLIDKWGYQFMETPTLEFYDT---VGVQSAIEEQ 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D DG+ + LR D+T P+AR  A        P R      VFR ++   GR  +F
Sbjct: 61  QLFKLLDQDGKTLVLRPDMTGPIARVAASKLLKHGHPLRVGYAANVFRAQEREGGRSAEF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G    +ADAE+  ++   L++ G+    + I I +  I D +  ++  + + 
Sbjct: 121 EQVGVELIGDGTTSADAEVIALVIGALKSAGLAS--FKIAIGHAGIADALFVEVLGNVER 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                                 ++  L E       +  K   L+S     +++ L +  
Sbjct: 179 A-------------------DVLRRFLYEKNYVGYREHVKSLPLSSIDKSRLLALLELRG 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +    E +  +  G+   +EL  + +++   G   N +++   +V  + YYTG ++E
Sbjct: 220 GIEVCGRAEEIVDSAQGKSVVDELKALWDILEDYGCTEN-VRLDLNMVSHMSYYTGILFE 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                            G V G G     +        PATGF + I RLI AL      
Sbjct: 279 VYAE-----------NVGFVIGSGGRYNKLLGHFNSPAPATGFGLRIDRLIEAL------ 321

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                +  P  I  +    +  ++   Y    R  G +  +
Sbjct: 322 ---HMKDEPCEIDAVIFSKEQRAQAIAYANEERMKGNKVVL 359


>gi|67920349|ref|ZP_00513869.1| Histidyl-tRNA synthetase 2, putative [Crocosphaera watsonii WH
           8501]
 gi|67857833|gb|EAM53072.1| Histidyl-tRNA synthetase 2, putative [Crocosphaera watsonii WH
           8501]
          Length = 403

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 88/442 (19%), Positives = 166/442 (37%), Gaps = 52/442 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I D+++ ++  +G+  I T  +E  D+L      ED  
Sbjct: 1   MIHQPPAGARDLLPLEVVQKAWINDTLQQVFGQWGYQRIVTSTIERLDTLKAGGAIEDDT 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK-HGPGRF 125
              V  L ++ G  + LR +LTA +AR          +P R      VFRN      GR 
Sbjct: 61  ---VIQLHNNSGGQLGLRPELTASVARAAVTRMIDTSYPQRLCYRANVFRNPPSSDHGRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  V+ + S    ADAE+ +++ + L+ +  +  ++++ + +  +   +L      
Sbjct: 118 LEFYQAGVELLFSGGTLADAEILLLVTNCLQKL--QVPNWYLILGDAGLTRSLLSPFPEA 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              K+      L ++D +    L        E     +           + +  ++    
Sbjct: 176 LRQKV---RNCLSSLDYVQLESLD----YPSEELKQRAILLFNLRGKPEDVLSKVLD--- 225

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                        +     G+   N L  + ELV KS      + +  ++++  +YYTG 
Sbjct: 226 -------------LSLDETGKSCLNNLKSLIELVNKSASQELPLTLDLSLIQTFDYYTGI 272

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
            ++ I                ++G GGRYD L  V   + ++ P  GFS+ +  L   L 
Sbjct: 273 TFKVIEQTNNK--------LQTLGQGGRYDQLLGVYDPEQKSAPGIGFSLNVGALHRCLL 324

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKN---FG 418
           S E           +    +   ++S  +   Y Q LR     +R  + L  ++N     
Sbjct: 325 STEILPQKAN---LIDYLVVAKKTESQIEALKYAQKLREDDPSVRVTIDL-ENRNDEEIK 380

Query: 419 NQLKYADRRNCP-LAIIQGTGE 439
              K A +     +  I+   E
Sbjct: 381 ---KDAQQNGIKTIVWIEKGQE 399


>gi|291542730|emb|CBL15840.1| ATP phosphoribosyltransferase, regulatory subunit [Ruminococcus
           bromii L2-63]
          Length = 388

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 87/410 (21%), Positives = 156/410 (38%), Gaps = 45/410 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K+    P G  D    E    + I  SI  ++   GF  + TP LE+ D     +
Sbjct: 1   MKKNLKM---TPEGTKDFLFAECSAMDYICTSIEKVFVKGGFKRVITPALEFYDVF--SI 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           P      + +F   D+ G+ +  R D T P+AR V+        P R Y    V+RN   
Sbjct: 56  PSSGISQESMFKTTDNKGRLLVARPDSTLPIARMVSTRLKNNTLPVRLYYKQAVYRNNPS 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F+Q  V+ +G+  + AD E+      ++ AV    +D+ I + + ++ + + +
Sbjct: 116 LAGRRNEFLQMGVELLGAKGKRADLEILTSAIKSISAV---ADDFRIELGHAEVFNALSK 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++ +  D K   R+ +           L  +K                      + +  +
Sbjct: 173 ELDIDNDYKEKIRVSIESKNYSALNNLLDKLK--------------------PCKTVSAI 212

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            S  S+   + + +    +      E   + L  I + +       N++ I   +V+  +
Sbjct: 213 RSLPSLFGGEEVFDEAYDICKGTGAENALDYLHTIYKELS-VLELGNKLIIDLGLVQRND 271

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+   +            +  +V  GGRYD L+S F   + P       I    +
Sbjct: 272 YYTGIVFSGYIN----------GIGDAVISGGRYDDLLSEF---DAPMGAAGFAIDTDAI 318

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            +K L     N  +   VL+     ++    K   Y   L   GI+A+  
Sbjct: 319 TMKHLSDDDVNYSDNPDVLVFA---ENGHEMKALRYVDELNEKGIKAQFS 365


>gi|15894222|ref|NP_347571.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           acetobutylicum ATCC 824]
 gi|20978498|sp|Q97KI4|HISZ_CLOAB RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|15023837|gb|AAK78911.1|AE007609_4 Histidyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508350|gb|ADZ19986.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           acetobutylicum EA 2018]
          Length = 407

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 86/411 (20%), Positives = 171/411 (41%), Gaps = 42/411 (10%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L+  +P G  D   +E  I+N I + +RN Y N G++ + +P LE+ D     L ++  
Sbjct: 3   NLKKYIPEGSRDILFEECTIKNNIENILRNSYINVGYEEVRSPTLEFYDVYN--LENQPI 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             + ++ L D+ G+ + LR D+T P+AR  A      V+P +    G ++R  K   G+ 
Sbjct: 61  SQEKMYKLFDNTGRILVLRPDMTTPIARICATKLKNRVYPLKLSYTGNIYRMNKALNGKI 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ +G S+  ADAE+ +     +   G+K     IG                 
Sbjct: 121 SEITQSGIEILGFSSLKADAEVIITAIKAILKTGLKNFKIEIG----------------- 163

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT-KGANLTSEQIDI-MVSF 243
                 E    + +   L +   + ++  +         +F  + ++L  E     +++ 
Sbjct: 164 ----QVEFFKSIISDTALKEQDTEKLRNFIENKNFSKVEEFILRNSDLIGETSSKVLMNL 219

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            ++   K + E  E +       +   ++  + ++V+++G+    I I   +V+ + YYT
Sbjct: 220 PNLFGGKEVIEKAEQLTSNKQAIEALKKVRDLYDIVKRAGFGE-YILIDLGMVQHINYYT 278

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G ++                +   +  GGRYD L+ +F   ++PATG +I +  L+ AL 
Sbjct: 279 GLIFRGYA----------HGIGDDLLSGGRYDKLLGQFGY-DIPATGLAINVDNLVAALD 327

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
                    + +       +   S ++ K       L + G RAE+ L  +
Sbjct: 328 D-----CVRENLYSRDRYVVFASSCNIEKAYEAVSKLNSEGKRAEVSLFDN 373


>gi|324325520|gb|ADY20780.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 420

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 77/435 (17%), Positives = 174/435 (40%), Gaps = 49/435 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR +         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT--SEQID 238
           K+ +H +++                   + ++  +         +F +   L    E + 
Sbjct: 172 KLSIHEEEE-------------------KALRTYIESKNYAALSNFIREKKLDRCDETVS 212

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++     +     + E  E +  +   +     +  I E + K GY S  I I   +++ 
Sbjct: 213 LLEKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEIYEAIDKLGYGS-YISIDLGMIQH 271

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L+YYTG +++  +                +  GGRYD L+  F    +PA G ++ ++++
Sbjct: 272 LDYYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQI 320

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           + AL+  +      +    +       + + L++ +    +++  G + E+ L S  N  
Sbjct: 321 VKALQEQQEPYERKRTDIMIHY-----ELNRLAEAERLRNLIQKDGKKVEISLFS--NLN 373

Query: 419 NQLKYADRRNCPLAI 433
           +  ++A +      +
Sbjct: 374 DTFQFARKNQIVTVV 388


>gi|317502043|ref|ZP_07960225.1| histidine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316896517|gb|EFV18606.1| histidine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 416

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 109/429 (25%), Positives = 189/429 (44%), Gaps = 48/429 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ +R+ ++  I+  Y+ +GF  +ETP +E+ ++L      ++  
Sbjct: 3   LKKKPVTGMKDMMPAEMEVRDYVIGLIKETYKTFGFSSMETPCVEHIENLCSKQGGDN-- 60

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY A + + +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLKLDTAKEEADLVDGGLRYDLTVPLSRYYANHANELPSPFKALQMGN 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G  +  A+ E+ +     L  +  K  ++ I IN+R+
Sbjct: 121 VWRADRPQRGRFRQFMQCDIDILGEPSNLAEIELILATTALLGKLDFK--NFTIRINDRR 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L  +    G   +D       V   +DK+DK GL GV   L             G    
Sbjct: 179 FLKAMAAYSGFKEED----YDSVFITLDKMDKIGLDGVAAELK------------GNGYA 222

Query: 234 SEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E ++  ++      +  + +    E ++G +A E   + L +I   V        ++  
Sbjct: 223 EESVEKYLALFEEITNDVEGVRLCKEKLQGYLAPEAA-DSLEMIITSVESQKEAEFKMSF 281

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQ+ PA GF
Sbjct: 282 DPTLVRGMSYYTGTIFEI----------SMDEFGGSVGGGGRYDKMIGKFTGQDTPAVGF 331

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-F 410
           SIG  R+++ L           +     +       + L +     +  R AG +  +  
Sbjct: 332 SIGFERIVMLLLERG-YEVPTSKPKKAFLIEKKLPQEKLLEVLEEARKEREAGRQVMIVN 390

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 391 MKKNKKFQK 399


>gi|291545650|emb|CBL18758.1| histidyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 417

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 115/434 (26%), Positives = 187/434 (43%), Gaps = 46/434 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   KE+ IRN +++ IR  Y  +GF  IETP +E+ ++L      E+  
Sbjct: 3   LKKKPVTGMKDILPKEMEIRNYVMNMIRETYGTFGFSAIETPCVEHIENLCSKQGGEN-- 60

Query: 67  NKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY + N + +  P +  ++G 
Sbjct: 61  EKLIFKIMKRGEKLKLDTAKTENDLTDSGLRYDLTVPLSRYYSNNANELPAPFKALQMGN 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+ +     L  +    +++ I IN+R+
Sbjct: 121 VWRADRPQRGRFRQFMQCDIDILGEPTYLAEIELVLATTTLLGKLDF--HNFTIRINDRR 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL  + +  G   +        V   +DK+DK G++GV   L +   +     T      
Sbjct: 179 ILKAMAQYSGFPAES----FDTVFIILDKMDKIGIEGVAEELEKEGFEKESIDTYLGLFR 234

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
               D+          + +  + E +   +       +L  I   V        ++    
Sbjct: 235 EITNDV----------EGVRYIKEKLSDVLEAGIA-EDLETIINTVESVKTADFKMSFDP 283

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F G N  A GFSI
Sbjct: 284 TLVRGMSYYTGPIFEI----------SMDEFGGSVGGGGRYDEMIGKFTGNNTCACGFSI 333

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFL 411
           G  R+++ L          K      +   +  +D L          R+AG  I   +  
Sbjct: 334 GFERIVMLLLERG-YEIPTKNGKKAYLIEKNMPADKLLNILKQATEERSAGTQINISIMK 392

Query: 412 GSSKNFGNQLKYAD 425
            + K   +QL  AD
Sbjct: 393 KNKKFQKDQL-AAD 405


>gi|119486421|ref|ZP_01620479.1| ATP phosphoribosyltransferase regulatory subunit [Lyngbya sp. PCC
           8106]
 gi|119456323|gb|EAW37454.1| ATP phosphoribosyltransferase regulatory subunit [Lyngbya sp. PCC
           8106]
          Length = 410

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 84/438 (19%), Positives = 162/438 (36%), Gaps = 44/438 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +LP G  D    ++  +  I   ++ ++  +G+  I T  LE  D+L          
Sbjct: 1   MVHQLPLGARDLLPLDVTQKLWIEHRLQQVFHRWGYHRIITSTLERLDTLMAGGA---VQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV-FPCRTYRIGPVFRNEKHGPG-R 124
              V  L + + Q + LR +LTA +AR V         +P R Y    +FR         
Sbjct: 58  RSTVIQLLEAEEQGLGLRPELTASIARTVVTRMAGASWWPQRLYYNANIFRKGGKTNYGG 117

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            ++F Q  V+ +G+    AD E+ +++ + L+ VG+   D H+ +    +   +L     
Sbjct: 118 QQEFYQAGVELLGAGGLLADTEIVLLLLECLQGVGLS--DCHLILGEAGLTRSLLSAFPA 175

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                + E +  L  I        Q ++                  +L  +  D++    
Sbjct: 176 KLQKPVREAIANLDRITLETLPMSQELRER-----------ALFLFDLRGQPEDVLSQVA 224

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            ++L+    +    +K           L+ + +    +  +  ++ +  ++++  +YYTG
Sbjct: 225 QLELDSEQQQALNNLKS----------LIDLLQNCDSTQMSPPKVVLDLSLIQTFDYYTG 274

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVAL 362
            V+E +                 +  GGRYD L  +   +G+  P  GFS  I  L   L
Sbjct: 275 IVFEVVSKTDSGA--------RVLAQGGRYDELLGLYHPQGETQPGIGFSFNIEDLHQVL 326

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGNQ 420
             +                 +     + +    Y + LR +   +R EM LG  +N  + 
Sbjct: 327 LGMNQLPQETPSNDW---LVVAETPQAYAAAFTYAEKLRQSTQLVRVEMELGYRENVDDL 383

Query: 421 LKYADRRNC-PLAIIQGT 437
             YA RR    +  + G 
Sbjct: 384 RDYARRRGIHQIVWVNGE 401


>gi|270308152|ref|YP_003330210.1| histidyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270154044|gb|ACZ61882.1| histidyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 412

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 80/402 (19%), Positives = 158/402 (39%), Gaps = 47/402 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G +D   +++     I     +    +G++ + TP+LEY            +  K V+S
Sbjct: 6   KGCSDLLPEDMLRFRYIESIFHDSCITWGYEEVRTPMLEYLSLFTSSGTLTPQMLKRVYS 65

Query: 73  LQDDD---GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             D D   G+ + LR D T P AR   +N   I    R      +FR ++ G  + R+  
Sbjct: 66  FLDWDGWSGERVVLRPDGTIPAARLYIDNLREIE-VARLCYTSNIFRFDETGK-KSRENW 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   + +G +   A+AE+  +  +TL  +G    D  + +++ +++  +L ++  + D++
Sbjct: 124 QLGAELIGVTGSEANAELITLALETLSRLGF--EDVELRLSHSQLIKAVLAQLEPNADEQ 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 +L     L                     +  +   L  E      +FL     
Sbjct: 182 HKIFDQLLDGDVALMSRLEAE------------KPELFRTLKLLMENKGTSAAFLK---- 225

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
              + +          E+  N+ +   +++ K G      +I     +G EYYTG ++  
Sbjct: 226 ---NVMAMAGAAGGDMEEPLNDFIAGVDILDKLG---VSYQIDLASGKGFEYYTGVIFHL 279

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +    +             GGGRYD L+    G + PA GF++ ++RLI  + + +   
Sbjct: 280 FVNGEHVG------------GGGRYDKLIPLLGGPDKPAAGFALYLNRLIPMIDAEDMYD 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              ++        + ++ D+L        ++R  GI AE+F 
Sbjct: 328 MVEEK------ILIKYEGDNLKNAYEMANLVRECGISAELFY 363


>gi|213583717|ref|ZP_03365543.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 215

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 87/233 (37%), Gaps = 31/233 (13%)

Query: 39  NYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAE 97
           +YG+  I  P++E +    + + +  D   K +++ +D +G  ++LR + TA   R   E
Sbjct: 4   SYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIE 63

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +        R + IGP+FR+E+   GR+RQF Q   +  G      DAE+ M+ A    A
Sbjct: 64  HGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRA 123

Query: 158 VG---------IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
           +G                   N R  L   LE+     D+            D   +   
Sbjct: 124 LGISEHVSLELNSIGSLEARANYRDALVAFLEQHQETLDE------------DCKRRMYT 171

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
             +++L  +                     ++  +L  D  +    L +L+  
Sbjct: 172 NPLRVLDSKN---------PDVQALLNDAPVLGDYLDDDSREHFAGLCKLLDA 215


>gi|170757485|ref|YP_001781201.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           botulinum B1 str. Okra]
 gi|229464972|sp|B1ILA3|HISZ_CLOBK RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|169122697|gb|ACA46533.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum B1 str. Okra]
          Length = 422

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 88/453 (19%), Positives = 178/453 (39%), Gaps = 49/453 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  K    +P G  D   KE  I+  I D +R +Y+  GF  I +P +E+ D     +
Sbjct: 1   MEKWNK---HIPEGMKDILFKESNIKLNIEDQLRKVYKYSGFSEIISPTIEFYDVFNSNI 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
             +  P + ++ L D+ G+ + LR D+ AP+ R          +P R      +FR  + 
Sbjct: 58  --QAIPQEKMYKLFDNLGRVLVLRPDMIAPIGRITGTKMKECTYPLRLCYTANIFRVNEK 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G+  +  Q  ++ +G++   +D +  +   + L ++G+K     +G        G  +
Sbjct: 116 LNGKRGEIAQSGIEIIGTNGIKSDVDSIVTAINALLSLGLKNFKIELGEA------GFFQ 169

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +  + + K      +   I   +   L+     +                 + E  +++
Sbjct: 170 ALTENMEIKEENLKKLKEIIRNKNYVALKKFLDEISSKY-------------SKEDFELI 216

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +   +  +  + E  + +       +  +++  I + +   G     I I   +V+ ++
Sbjct: 217 KNLPKLFGDIKIIEKAKALTKNKKALRSLDDIHNIYKSIENIG-LEAYISIDLGMVQNID 275

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +               S+  GGRYD L+  F    +PATGF+I +  +++
Sbjct: 276 YYTGVIFKGYVEEVG----------DSILSGGRYDNLIQHFGI-ELPATGFAINVDDIMI 324

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ALK   + + +  +        + +  + L K   + Q L+   I  E+ L         
Sbjct: 325 ALKKQNTMSMDKDKK-----VLIFYKEEFLRKAYDFMQELKMKKIICELSLLDDD--KEI 377

Query: 421 LKYADRRNCPLAI-IQGTGERSRGMLQIKDLAK 452
           L Y+ ++     I   G        L +KDL  
Sbjct: 378 LLYSKKKGIDFIIGFMGEE-----KLFVKDLKS 405


>gi|170686652|ref|ZP_02877872.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0465]
 gi|196035293|ref|ZP_03102698.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           W]
 gi|228945102|ref|ZP_04107462.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|254682433|ref|ZP_05146294.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           anthracis str. CNEVA-9066]
 gi|254726097|ref|ZP_05187879.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           anthracis str. A1055]
 gi|170669175|gb|EDT19918.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0465]
 gi|195991970|gb|EDX55933.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           W]
 gi|228814546|gb|EEM60807.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 420

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR V         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVVGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LAGKYNEIVQSGIEVIGIDNVRAEIECVISVIQSLQKLRVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEKF-----------LRTYIESKNYASLSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G +  + L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|226948896|ref|YP_002803987.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum A2 str. Kyoto]
 gi|254801979|sp|C1FN35|HISZ_CLOBJ RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|226843542|gb|ACO86208.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum A2 str. Kyoto]
          Length = 422

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 87/443 (19%), Positives = 175/443 (39%), Gaps = 46/443 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G  D   KE  I+  I D +R IY+  GF  I +P +E+ D     +  +  P + +
Sbjct: 8   IPEGMKDILFKESNIKLNIEDQLRKIYKYSGFSEIISPTIEFYDVFNSNI--QAIPQEKM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D+ G+ + LR D+T P+ R          +P +      +FR  +   G+  +  Q
Sbjct: 66  YKLFDNLGRILVLRPDMTTPIGRITGTKMKDCTYPLKLCYTANIFRVNEKLNGKRGEITQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G++   +D +  +   + L +VG+K     +G        G  + +  + + K 
Sbjct: 126 SGIEIIGTNGIKSDVDSIVTAINALLSVGLKNFKIELGEA------GFFQALTENMEIKE 179

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                +   I   +   L+     +                 + E  +++ +   +  + 
Sbjct: 180 ENLKKLKEIIRNKNYVALKKFLDEISSKY-------------SKEDFELIKNLPKLFGDI 226

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E  + +       K  +++  I + +   G     I I   +V+ ++YYTG +++  
Sbjct: 227 KIIEKAKALTKNKKALKSLDDIHNIYKSIENIG-LEAYISIDLGMVQNIDYYTGVIFKGY 285

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +               S+  GGRYD L+  F    +PATGF+I +  +++ALK   + + 
Sbjct: 286 VEEVG----------DSILSGGRYDNLIQHFGI-ELPATGFAINVDDIMIALKKQNTMSM 334

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
           +  +        + +  + L K   + Q L+   I  E+ L         L Y+ ++   
Sbjct: 335 DKDKK-----VLIFYKEEFLRKAYDFMQELKMKKIICELSLLDDD--KEILLYSKKKGID 387

Query: 431 LAI-IQGTGERSRGMLQIKDLAK 452
             I   G        L +KDL  
Sbjct: 388 FIIGFMGEE-----KLFVKDLKS 405


>gi|118476965|ref|YP_894116.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis str. Al Hakam]
 gi|196042207|ref|ZP_03109489.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           NVH0597-99]
 gi|225863367|ref|YP_002748745.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           03BB102]
 gi|228914078|ref|ZP_04077698.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229090459|ref|ZP_04221700.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock3-42]
 gi|300118548|ref|ZP_07056287.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           SJ1]
 gi|166219819|sp|A0RBL6|HISZ_BACAH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|254801976|sp|C1EMB3|HISZ_BACC3 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|118416190|gb|ABK84609.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis str. Al Hakam]
 gi|196026980|gb|EDX65605.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           NVH0597-99]
 gi|225787472|gb|ACO27689.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           03BB102]
 gi|228692885|gb|EEL46605.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock3-42]
 gi|228845531|gb|EEM90562.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|298724072|gb|EFI64775.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           SJ1]
          Length = 420

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR V         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVVGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LAGKYNEIVQSGIEVIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEK-----------VLRTYIESKNYASLSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G +  + L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|30261504|ref|NP_843881.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           anthracis str. Ames]
 gi|47526696|ref|YP_018045.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184332|ref|YP_027584.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           anthracis str. Sterne]
 gi|65318770|ref|ZP_00391729.1| COG3705: ATP phosphoribosyltransferase involved in histidine
           biosynthesis [Bacillus anthracis str. A2012]
 gi|165870332|ref|ZP_02214987.1| putative histidyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167639224|ref|ZP_02397496.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0193]
 gi|170706186|ref|ZP_02896647.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0389]
 gi|177651566|ref|ZP_02934355.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0174]
 gi|190568024|ref|ZP_03020934.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|227815748|ref|YP_002815757.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. CDC 684]
 gi|229603212|ref|YP_002865916.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0248]
 gi|254733849|ref|ZP_05191563.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           anthracis str. Western North America USA6153]
 gi|254753850|ref|ZP_05205885.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           anthracis str. Vollum]
 gi|254758945|ref|ZP_05210972.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           anthracis str. Australia 94]
 gi|46395773|sp|Q81T64|HISZ_BACAN RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|254801974|sp|C3P500|HISZ_BACAA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|254801975|sp|C3L9Q3|HISZ_BACAC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|30255358|gb|AAP25367.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. Ames]
 gi|47501844|gb|AAT30520.1| putative histidyl-tRNA synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49178259|gb|AAT53635.1| histidyl-tRNA synthetase, putative [Bacillus anthracis str. Sterne]
 gi|164713827|gb|EDR19349.1| putative histidyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512663|gb|EDR88037.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0193]
 gi|170128720|gb|EDS97586.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0389]
 gi|172082844|gb|EDT67907.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0174]
 gi|190560758|gb|EDV14733.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|227006340|gb|ACP16083.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. CDC 684]
 gi|229267620|gb|ACQ49257.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0248]
          Length = 420

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR V         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVVGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LAGKYNEIVQSGIEVIGIDNVRAEIECVISVIQSLQKLRVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEKF-----------LRTYIESKNYASLSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I    ++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIEKLGYGS-YISIDLGTIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G +  + L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|257064226|ref|YP_003143898.1| ATP phosphoribosyltransferase [Slackia heliotrinireducens DSM
           20476]
 gi|256791879|gb|ACV22549.1| ATP phosphoribosyltransferase [Slackia heliotrinireducens DSM
           20476]
          Length = 538

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 174/410 (42%), Gaps = 50/410 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRGF D   +E   R  I D ++  +  +G+ P+ETPLLE   S+ +    ED P
Sbjct: 1   MIPVTPRGFRDILPEEALKREEITDKVKACFSAHGYLPVETPLLEDRHSMERATAVEDTP 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
               F + DD G+ + LR DLT P+AR VA        P R     P+ R+     G+ R
Sbjct: 61  ----FQMFDDGGRLLILRSDLTLPIARLVATRMHADESPVRLRYAAPIVRDTTVFMGKSR 116

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           Q  Q  ++ +G S + AD E+  ++A++L A G+    + I   + K+    L+  G++G
Sbjct: 117 QVTQLGIELIGQSGKKADVEVLSLLAESLNAAGLAG--WRIVCGDVKLARAALDAAGIYG 174

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +D+                     V   +          F +   ++      +   + +
Sbjct: 175 EDRT-------------------EVLRFIHRSDLVGLDVFLETLGISENARRAVSQLMRV 215

Query: 247 DLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             +  ++ E   +++   A   G  EL V  +  R+ G+ S+ + +  +++   +YYTG 
Sbjct: 216 SGDAAALDEATAILESIGADTTGIEELQVGFDAARELGF-SDALSMDLSVLNSFDYYTGL 274

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+EA            P +   +  GGRYDG+++++   + PA GFSI +  L  A+ + 
Sbjct: 275 VFEA----------HAPGLSAPLASGGRYDGVLAQWG-VDAPAAGFSISLDGLEEAIGA- 322

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMY---TQMLRTAG----IRAE 408
                       + +       +S++  +        LR  G    IR +
Sbjct: 323 ----CVEDRPLRIAVPKGSLFEESVNVLESVGFDVSELRNPGRHLIIRTD 368


>gi|49481698|ref|YP_035622.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|81396733|sp|Q6HLE9|HISZ_BACHK RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|49333254|gb|AAT63900.1| histidine--tRNA ligase (histidyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 420

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR V         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVVGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LAGKYNEIVQSGIEVIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEK-----------VLRTYIESKNYAALSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G +  + L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|168182497|ref|ZP_02617161.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum Bf]
 gi|182674434|gb|EDT86395.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum Bf]
          Length = 422

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 88/445 (19%), Positives = 182/445 (40%), Gaps = 50/445 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P+G  D   +E  I+  I D +R IY+  GF  I +P +E+ D     +  +  P + +
Sbjct: 8   IPKGMKDILFEESNIKLDIEDQLRKIYKYSGFSEIISPTIEFYDVFNSNI--QAIPQEKM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D+ G+ + LR D+T P+ R          +P +      +FR  +   G+  +  Q
Sbjct: 66  YKLFDNLGRILVLRPDMTTPIGRITGTKMKDCTYPLKLCYTANIFRVNEKLNGKRGEITQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G+    +D +  +   + L ++G++  ++ I +    + + + E + +  +   
Sbjct: 126 SGIEIIGTKGIKSDVDSIVTAINALLSLGLR--NFKIELGEAGLFEALTENMRIEEE--- 180

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL--TSEQIDIMVSFLSIDL 248
                            L+ +K ++          F    +L  + E  +I+ +   +  
Sbjct: 181 ----------------NLKKLKEIIRNKNYVALKKFLDEISLKYSKEDFEIIENLPKLFG 224

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +  + E  + +       K  N++  I + +   G  S  I I   +V+ ++YYTG +++
Sbjct: 225 DIEIIEKAKALTKNEKALKSLNDIYNIYKSIEDIGLGS-YISIDLGMVQNIDYYTGVIFK 283

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +                +  GGRYD L+  F    +PATGF+I +  +++ALK   + 
Sbjct: 284 GYVEEVG----------DFILSGGRYDNLIQHFGI-ELPATGFAINVDDIMIALKKQNTM 332

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGSSKNFGNQLKYADRR 427
           + +  +        + +  + L K   + Q L+   I  E+  L   K     L Y+ ++
Sbjct: 333 SMDKDKK-----VLIFYKEEFLRKAYDFMQELKMKKIICELSLLDEDKEI---LLYSKKK 384

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAK 452
                 I G        L +KDL  
Sbjct: 385 GIDF--IIGFT--REEKLFVKDLKS 405


>gi|237794905|ref|YP_002862457.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum Ba4 str. 657]
 gi|259709912|sp|C3KVW9|HISZ_CLOB6 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|229261449|gb|ACQ52482.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum Ba4 str. 657]
          Length = 422

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 89/445 (20%), Positives = 183/445 (41%), Gaps = 50/445 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P+G  D   +E  I+  I D +R IY+  GF  I +P +E+ D     +  +  P + +
Sbjct: 8   IPKGMKDILFEESNIKLDIEDQLRKIYKYSGFSEIISPTIEFYDVFNSNI--QAIPQEKM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D+ G+ + LR D+T P+ R          +P +      +FR  +   G+  +  Q
Sbjct: 66  YKLFDNLGRILVLRPDMTTPIGRITGTKMKDCTYPLKLCYTANIFRVNEKLNGKRGEITQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G+    +D +  +   + L ++G++  ++ I +    + + + E + +  +   
Sbjct: 126 SGIEIIGTKGIKSDVDSIVTAINALLSLGLR--NFKIELGEAGLFEALTENMRIEEE--- 180

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL--TSEQIDIMVSFLSIDL 248
                            L+ +K ++          F    +L  + E  +I+ +   +  
Sbjct: 181 ----------------NLKKLKEIIRNKNYVALKKFLDEISLKYSKEDFEIIENLPKLFG 224

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +  + E  + +       K  N++  I + +   G  S  I I   +V+ ++YYTG +++
Sbjct: 225 DIEIIEKAKALTKNEKALKSLNDIYNIYKSIEDIGLGS-YISIDLGMVQNIDYYTGVIFK 283

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +               S+  GGRYD L+  F    +PATGF+I +  +++ALK   + 
Sbjct: 284 GYVEEVG----------DSILSGGRYDNLIQHFGI-ELPATGFAINVDDIMIALKKQNTM 332

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGSSKNFGNQLKYADRR 427
           + +  +        + +  + L K   + Q L+   I  E+  L   K     L Y+ ++
Sbjct: 333 SMDKDKK-----VLIFYKEEFLRKAYDFMQELKMKKIICELSLLDEDKEI---LLYSKKK 384

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAK 452
                 I G        L +KDL  
Sbjct: 385 GIDF--IIGFT--REEKLFVKDLKS 405


>gi|17230407|ref|NP_486955.1| ATP phosphoribosyltransferase regulatory subunit [Nostoc sp. PCC
           7120]
 gi|25453259|sp|Q8YT12|HISZ_ANASP RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|17132009|dbj|BAB74614.1| histidyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 404

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 95/436 (21%), Positives = 174/436 (39%), Gaps = 53/436 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D    ++  +  I D ++ ++  +G+  I T  LE  D+L      E   
Sbjct: 1   MVYQPAAGARDLLPLDVAQKRWIEDKLQQVFHRWGYHRIITSTLERMDTLMAG---EAIQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE-KHGPGRF 125
            + V  LQ+ + + + LR +LTA +AR V      +  P R Y    VFR   ++   R 
Sbjct: 58  RQMVIQLQNSEDEELGLRPELTASIARAVVTRMANLRHPQRLYYNANVFRRIWENRHNRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           ++F Q  V+ +G     A+AE+ ++  + L A+G++  D+H+ +    I   +L+   ++
Sbjct: 118 QEFYQAGVELLGVGGLLANAEVLLLAGNCLTALGLQ--DWHLILGEAGITRSLLDAFPIN 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              K+   +  L  I          ++                  +L     D++    S
Sbjct: 176 LRAKVRSAIAHLDRITIDTLPLTDELRER-----------ARIMLDLRGNSADVLQKVSS 224

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           ++L+                ++  N L  + EL+   G     I +  ++++ ++YYTG 
Sbjct: 225 LNLDAE-------------QQEAVNNLKSLVELLESGGKFP--IILDLSLIQTIDYYTGL 269

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
           V+E +                 +G GGRYD L  +   +G+N+P  GF + I  L   L 
Sbjct: 270 VFEIVNNTDSQA--------RVLGRGGRYDQLLGLYHPQGENIPGIGFVLNIEDLYQVLL 321

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGS--SKNFGN 419
           S +                +  +  + S    Y Q LR +   +R E+ LGS        
Sbjct: 322 STQQLPQETPASDW---LVVPENPAAHSAAFAYAQKLRESPDLVRVELDLGSTDRATIK- 377

Query: 420 QLKYA-DRRNCPLAII 434
             +YA DR    +A I
Sbjct: 378 --QYARDRSIAQIAWI 391


>gi|301053043|ref|YP_003791254.1| histidine-tRNA ligase [Bacillus anthracis CI]
 gi|300375212|gb|ADK04116.1| histidine-tRNA ligase [Bacillus cereus biovar anthracis str. CI]
          Length = 420

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR V         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVVGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LAGKYNEIVQSGIEVIGIDNVRAEIECVISVIQSLQKLRVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEK-----------VLRTYIESKNYAALSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G +  + L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|147669408|ref|YP_001214226.1| histidine--tRNA ligase [Dehalococcoides sp. BAV1]
 gi|189043554|sp|A5FR32|HISZ_DEHSB RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|146270356|gb|ABQ17348.1| Histidine--tRNA ligase [Dehalococcoides sp. BAV1]
          Length = 412

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 81/402 (20%), Positives = 163/402 (40%), Gaps = 47/402 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G +D   +++     I     +    +G++ + TP+LEY            +  K V+S
Sbjct: 6   KGCSDLLPEDMLRFRYIESIFHDSCITWGYEEVRTPMLEYLSLFTSSGTLTPQMLKRVYS 65

Query: 73  LQDDD---GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             D D   G+ + LR D T P AR   ++   +    R      +FR ++ G  + R+  
Sbjct: 66  FLDWDGWSGERVVLRPDGTIPAARLYIDSLQEM-DVARLCYTSNIFRFDETGK-KSRENW 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   + +G ++  A+AE+  +  +TL  +G    D  + +++ +++  +L ++  + D++
Sbjct: 124 QLGAELIGVTSPEANAELITLALETLARLGF--EDVELRLSHAQLIKAVLAQLEPNADEQ 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                   +  D+L    +  +  L  E       +  +   L  E      SFL     
Sbjct: 182 H-------KIFDQLLDGDIALMSRLETEKP-----ELFRTLKLLMENKGTSASFLK---- 225

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
              + +          E+  N+ +   +++ K G      +I     +G EYYTG ++  
Sbjct: 226 ---NVMAMAGTAGGELEEPLNDFIAGVDVLDKLG---VSYQIDLASGKGFEYYTGVIFHL 279

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +    +             GGGRYD L+    G + PA GF++ ++RLI  + + +   
Sbjct: 280 FVNGEHVG------------GGGRYDKLIPLLGGPDKPAAGFALYLNRLIPMIDAEDMYD 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              ++        + +  D+L        ++R  GI AE+F 
Sbjct: 328 MVEEK------ILIKYQGDNLKTAYEIANLIRECGISAELFY 363


>gi|206977578|ref|ZP_03238471.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           H3081.97]
 gi|217958981|ref|YP_002337529.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH187]
 gi|222095137|ref|YP_002529197.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Q1]
 gi|229138194|ref|ZP_04266790.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           BDRD-ST26]
 gi|226702197|sp|B7HKC8|HISZ_BACC7 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|254801977|sp|B9IUZ4|HISZ_BACCQ RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|206744151|gb|EDZ55565.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           H3081.97]
 gi|217067353|gb|ACJ81603.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           AH187]
 gi|221239195|gb|ACM11905.1| histidine--tRNA ligase (histidyl-tRNA synthetase) [Bacillus cereus
           Q1]
 gi|228645226|gb|EEL01462.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           BDRD-ST26]
          Length = 420

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR +         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEK-----------VLRTYIESKNYAALSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIDKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G +  + L S  N  + 
Sbjct: 323 ALQEQQKPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|16332160|ref|NP_442888.1| ATP phosphoribosyltransferase regulatory subunit [Synechocystis sp.
           PCC 6803]
 gi|2501003|sp|P74592|HISZ_SYNY3 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|1653789|dbj|BAA18700.1| histidyl tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 401

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 88/412 (21%), Positives = 150/412 (36%), Gaps = 45/412 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    P G  D    E+  + RI D ++  +  +G+  I T  LE+ D+L          
Sbjct: 1   MIHHPPAGARDLLPLEVAQKARINDQLQQTFHRWGYQRIVTSTLEWLDTLVAGGA---IS 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-PGRF 125
              V  LQD     + LR +LTA +AR V     T   P R      VFRN   G  G+ 
Sbjct: 58  ANNVIQLQDSGEGRLGLRPELTASIARAVVTRM-TDNQPQRLCYRANVFRNPPEGYHGKQ 116

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  ++ + +    ADAE+ +++ D L  +G+   D+ + + +  +   +L K+   
Sbjct: 117 MEFFQAGIELLFAGGVRADAEILLLLTDCLTQLGLS--DWQLILGDAGLTRSLLAKLPPT 174

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               + + +  L  ++             L                        +  F  
Sbjct: 175 LQATVRDCITRLDYVELSQLPYPDNEAKNL-----------------------ALQLFDL 211

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + +      +          + L  +  LV  SG     + +  + ++  +YYTG 
Sbjct: 212 RGTVEEVLARLGKLDLQGECLGLVDRLQALLCLVAASGDGPANLVLDLSWLQPFDYYTGM 271

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV--SRFKGQNVPATGFSIGISRLIVALK 363
           V++A+       +     V G    GGRYD L+     + Q+ P TGFS+ I  L   L 
Sbjct: 272 VFQAV-----SRQADNCYVLGQ---GGRYDQLLSQYHPQQQSFPGTGFSLNIEELHQCLL 323

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGS 413
            L +         P+       D  +      + Q LR      R E+ LG 
Sbjct: 324 ELGTLP---TSTAPIDYLVCPVDDTAEGATFRHAQQLRRQHPDRRVELDLGG 372


>gi|73748650|ref|YP_307889.1| histidyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|289432675|ref|YP_003462548.1| histidine--tRNA ligase [Dehalococcoides sp. GT]
 gi|109892209|sp|Q3ZXL5|HISZ_DEHSC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|73660366|emb|CAI82973.1| histidyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|288946395|gb|ADC74092.1| Histidine--tRNA ligase [Dehalococcoides sp. GT]
          Length = 412

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 81/402 (20%), Positives = 163/402 (40%), Gaps = 47/402 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G +D   +++     I     +    +G++ + TP+LEY            +  K V+S
Sbjct: 6   KGCSDLLPEDMLRFRYIESIFHDSCITWGYEEVRTPMLEYLSLFTSSGTLTPQMLKRVYS 65

Query: 73  LQDDD---GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             D D   G+ + LR D T P AR   ++   +    R      +FR ++ G  + R+  
Sbjct: 66  FLDWDGWSGERVVLRPDGTIPAARLYIDSLQEM-DVARLCYTSSIFRFDETGK-KSRENW 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   + +G ++  A+AE+  +  +TL  +G    D  + +++ +++  +L ++  + D++
Sbjct: 124 QLGAELIGVTSPEANAELITLALETLARLGF--EDVELRLSHAQLIKAVLAQLEPNADEQ 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                   +  D+L    +  +  L  E       +  +   L  E      SFL     
Sbjct: 182 H-------KIFDQLLDGDIALMSRLETEKP-----ELFRTLKLLMENKGTSASFLK---- 225

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
              + +          E+  N+ +   +++ K G      +I     +G EYYTG ++  
Sbjct: 226 ---NVMAMAGTAGGELEEPLNDFIAGVDVLDKLG---VSYQIDLASGKGFEYYTGVIFHL 279

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +    +             GGGRYD L+    G + PA GF++ ++RLI  + + +   
Sbjct: 280 FVNGEHVG------------GGGRYDKLIPLLGGPDKPAAGFALYLNRLIPMIDAEDMYD 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              ++        + +  D+L        ++R  GI AE+F 
Sbjct: 328 MVEEK------ILIKYQGDNLKNAYEIANLIRECGISAELFY 363


>gi|114602288|ref|XP_517979.2| PREDICTED: similar to histidyl-tRNA synthetase [Pan troglodytes]
          Length = 185

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 4/133 (3%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDIIIRCFKRHGAEVIDTPVFELKETLMGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +             N     G
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA-KVYRRDNPAMTRG 166

Query: 124 RFRQFIQCDVDNV 136
           R+R+F QC     
Sbjct: 167 RYREFYQCVSGKW 179


>gi|154505863|ref|ZP_02042601.1| hypothetical protein RUMGNA_03405 [Ruminococcus gnavus ATCC 29149]
 gi|153793881|gb|EDN76301.1| hypothetical protein RUMGNA_03405 [Ruminococcus gnavus ATCC 29149]
          Length = 423

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 113/429 (26%), Positives = 184/429 (42%), Gaps = 48/429 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ IR+ ++  I+  Y  +GF  IETP +E+ ++L      ++  
Sbjct: 5   LKKKPVTGMKDMMPAEMEIRDYVIGQIKETYRAFGFSSIETPCVEHIENLCSKQGGDN-- 62

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY A N + +  P +  ++G 
Sbjct: 63  EKLIFKILKRGEKLKIEEAKEEKDVVDGGLRYDLTVPLSRYYANNANELPSPFKALQMGN 122

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+ +     L  +  K  ++ I IN+R+
Sbjct: 123 VWRADRPQRGRFRQFMQCDIDILGEPGNLAEIELILATTTLLGKLDFK--NFTIRINDRR 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           IL  +    G    D       V   +DK+DK GL GV   L E                
Sbjct: 181 ILKAMAAYSGFAESD----YENVFIILDKMDKIGLDGVAAELEEN------------GYA 224

Query: 234 SEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E ++  +       +  + +    E ++G +A +     L +I   V  +      +K 
Sbjct: 225 KESVEKYLQLFKEITNDVEGVRYCKEKLEGFLADDAA-ASLEMIITSVESAKEADFCMKF 283

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQN PA GF
Sbjct: 284 DPTLVRGMSYYTGTIFEI----------SMDEFGGSVGGGGRYDEMIGKFTGQNTPAVGF 333

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-F 410
           SIG  R+++ L                 +       + + K     +  R  G +  +  
Sbjct: 334 SIGFERIVMLLLERG-YQVPTAAQKKAFLIDKKMPKEGMLKILNLAKAERALGKQVMIVN 392

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 393 MKKNKKFQK 401


>gi|325262051|ref|ZP_08128789.1| histidine--tRNA ligase [Clostridium sp. D5]
 gi|324033505|gb|EGB94782.1| histidine--tRNA ligase [Clostridium sp. D5]
          Length = 423

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 106/429 (24%), Positives = 180/429 (41%), Gaps = 48/429 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   +E+ IR+  +  I+  Y+ +GF  IETP +E+ ++L      ++  
Sbjct: 5   LKKKPVTGMKDMMPQEMEIRDYCIGLIKETYKAFGFSSIETPCVEHIENLCSKQGGDN-- 62

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY + N + +  P +  ++G 
Sbjct: 63  EKLIFKILKRGEKLKIDTAQDEGDLVDGGLRYDLTVPLSRYYSNNANDLPSPFKALQMGN 122

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+ +  +  L  +  K     I      
Sbjct: 123 VWRADRPQRGRFRQFMQCDIDILGEPGNLAEIELILATSTLLGKLDFKNFTIRINDRR-- 180

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                L+ +  +   +  +   V   +DK+DK G+ GV   L +                
Sbjct: 181 ----FLKAMAAYSGFQETDYENVFITLDKMDKIGMDGVAAELEDY------------GYA 224

Query: 234 SEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E ++  +          + +    E ++G +  E     L +I   V  +     RI  
Sbjct: 225 KESVEKYLQLFKEITGDVEGVRYCKEKLEGFLEDEAA-ASLEMIITSVESAKEADFRITF 283

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQN PA GF
Sbjct: 284 DPTLVRGMSYYTGTIFEI----------SMDEFGGSVGGGGRYDEMIGKFTGQNTPAVGF 333

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-F 410
           SIG  R+++ L                 +   +   + + K     +  R AG +  +  
Sbjct: 334 SIGFERIVMLLLERG-YQVPASRDKKAFLLEKNMPQEGMLKVLNLAKEERAAGRQVMIVN 392

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 393 MKKNKKFQK 401


>gi|167770616|ref|ZP_02442669.1| hypothetical protein ANACOL_01962 [Anaerotruncus colihominis DSM
           17241]
 gi|167667211|gb|EDS11341.1| hypothetical protein ANACOL_01962 [Anaerotruncus colihominis DSM
           17241]
          Length = 403

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 82/420 (19%), Positives = 148/420 (35%), Gaps = 47/420 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E   R   +  +  ++   G+  + TP +E+ D  G        P + +
Sbjct: 8   TPDGTRDLLFGECVSRGEAVSRLTTMFRARGYRQVITPAIEFYDVFGSSAAH--FPQENM 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D  G+ + +R D T P+AR VA        P R Y    V+R E    G+  +  Q
Sbjct: 66  YKLTDTRGRLMVIRPDCTIPIARLVATRLAASPMPLRLYYSENVYRVEHDLRGKRNEVFQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+ +GS+A  +D E+  + A  L  +G     + I + +      +++ +   G+ K 
Sbjct: 126 TGVELIGSNALRSDLEIVELAASGLSDIGG--ERFRIELCHIGYFKALIDSLDAPGETK- 182

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                             + ++  + +      GD           + +         E+
Sbjct: 183 ------------------EQIRQCIEQKNYPALGDLLDPFGAARAALALRYLPRLFGGEE 224

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              + Y L     A  +  + L  I + +R+ G     + +   +V  +EYYTG ++   
Sbjct: 225 VFEKAYALFDENGA-RESLDYLRSIYDYLRQLG-LEGSVIVDLGLVNQIEYYTGIIFRGY 282

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                        +   V  GGRYD L+S F    +PA GF++        ++       
Sbjct: 283 F----------DGIGEPVLSGGRYDNLISDFG-AALPAVGFAVNADLASAVIEKQ----- 326

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                       +  D   L +   Y + L   G+  E  +    +      YA RR   
Sbjct: 327 ----PPQTPDILVFSDEAHLPQAVNYIRSLTDNGLVVESSMFDDYDASA--DYARRRGIR 380


>gi|220909267|ref|YP_002484578.1| ATP phosphoribosyltransferase regulatory subunit [Cyanothece sp.
           PCC 7425]
 gi|254801981|sp|B8HUL5|HISZ_CYAP4 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|219865878|gb|ACL46217.1| histidyl-tRNA synthetase 2 [Cyanothece sp. PCC 7425]
          Length = 401

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 73/412 (17%), Positives = 150/412 (36%), Gaps = 52/412 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I   ++  +  + +  I TP LE  ++L          
Sbjct: 1   MIYQPPAGARDVLPLEVAQKRWIEQRLQQTFHRWSYQQIITPTLERLETLMAGGA---IQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + V    D +   + LR +LTA +AR         ++P R Y    +FR         +
Sbjct: 58  PETVIQFWDAEEGLLGLRPELTASIARAAVTRMAGAIYPQRLYYSANIFRRSPGMELSSQ 117

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           Q        +   +  AD E+ +++ D L ++G+   ++H+ +    +   +L    L  
Sbjct: 118 QEFFQTGVELLGGSGLADGEILLLLQDCLHSLGL--PEWHVVLGEAGLTRSLLSNFPLEL 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
              + + +  L              ++ L E  +D         +L  E   ++     +
Sbjct: 176 QPHIRQAIARLD-------------RVALTELPSDLRQPALDLLDLRGEPASVLQRLAQL 222

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           DL+                 +  + L  + ELV         + +  ++++  +YYTG V
Sbjct: 223 DLK-------------PEQRQIVHHLKTLLELVGDRF----PLTLDLSLIQTFDYYTGIV 265

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVALKS 364
           ++ I                 +G GGRYD L++R+    +++P  GF++ +  L   L  
Sbjct: 266 FDVIATGE--------REQRLLGEGGRYDQLLARYHPGGESLPGIGFALNLEDLHQVLLP 317

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR----TAGIRAEMFLG 412
                  +          +    ++++    Y + LR    +  +R EM L 
Sbjct: 318 TGQLPQQMPTSQW---LIVPVHPEAIAAAFSYAEKLRGQPESQELRVEMALE 366


>gi|317132396|ref|YP_004091710.1| histidyl-tRNA synthetase 2 [Ethanoligenens harbinense YUAN-3]
 gi|315470375|gb|ADU26979.1| histidyl-tRNA synthetase 2 [Ethanoligenens harbinense YUAN-3]
          Length = 397

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 82/430 (19%), Positives = 159/430 (36%), Gaps = 51/430 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +    P G  D   KE  +R  +   + N++++YGF  + TP +E+ D      
Sbjct: 1   MAKYRNV---TPDGGCDLLFKECEVRRAVETKLVNLFKSYGFSEVVTPSMEFYDVFRDST 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D++     ++ L D  G+ ++LR D T P+AR V+        P R +    VFR    
Sbjct: 58  MDDET----MYKLIDARGRILALRPDNTTPIARVVSTKLKGFAPPLRLFYNQNVFRINPS 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +  QC V+ +G   E AD E   +    L +V     D+ + I +      +++
Sbjct: 114 MSGRRDEIAQCGVELIGIGGERADIEAISLAIAALRSV---TPDFRLEIGHVGFFKALID 170

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + +  + K                   + ++  +      + G         +     +
Sbjct: 171 DLPVELEIK-------------------ERIRSFIDSKSYASIGALLAPYGHENAACRAL 211

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + +    +            L  + E + + G+    I I   +V+ ++
Sbjct: 212 AELPHLFGGDEVLKRALEIAPNEQAAGIIRYLQSVYETLCEMGWKE-HIMIDLGLVQSID 270

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+          +         V  GGRYD L  +F    +PATGF++ +  +  
Sbjct: 271 YYTGVVF----------KGYMHGPGEPVLLGGRYDELYGKFG-LPMPATGFALNVDAV-- 317

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
              + E    N  +   VL+    ++   +     +   L  +G+  E  +  +    + 
Sbjct: 318 ---AREGLDENKSDRADVLVF---YEKGYVKAAFAHADDLIASGLTCERSVFEA--LEDA 369

Query: 421 LKYADRRNCP 430
           + YA ++   
Sbjct: 370 VDYARKKGIR 379


>gi|52143940|ref|YP_082888.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           E33L]
 gi|81688798|sp|Q63DX4|HISZ_BACCZ RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|51977409|gb|AAU18959.1| histidine--tRNA ligase (histidyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 420

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR           P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLAR--VMGTQRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LAGKYNEIVQSGIEVIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEK-----------VLRTYIESKNYAALSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G +  + L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|229095995|ref|ZP_04226970.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock3-29]
 gi|229102107|ref|ZP_04232818.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock3-28]
 gi|228681307|gb|EEL35473.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock3-28]
 gi|228687380|gb|EEL41283.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock3-29]
          Length = 420

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 167/433 (38%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 LSGKYNEIVQSGIEIIGIDNVRAEIECVISVMQALQRLKVQS--FTIEIGQVELYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E V + GY    I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEIYEAVERLGYGP-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    V A G ++ +++++ 
Sbjct: 274 YYTGIIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-VSAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  + S         +       + + L++ +    +LR  G  A++ L S  N  + 
Sbjct: 323 ALQEQQESYEREPIDMMIHY-----ELNRLAEAERLRNLLRKDGKNAQLSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A        +
Sbjct: 376 FQFARNNKIVTVV 388


>gi|186681634|ref|YP_001864830.1| ATP phosphoribosyltransferase regulatory subunit [Nostoc
           punctiforme PCC 73102]
 gi|229464976|sp|B2IWE2|HISZ_NOSP7 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|186464086|gb|ACC79887.1| putative histidyl-tRNA synthetase 2 [Nostoc punctiforme PCC 73102]
          Length = 403

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 90/434 (20%), Positives = 171/434 (39%), Gaps = 49/434 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D    ++  +  I D ++ ++  +G+  I T  LE  D+L      E   
Sbjct: 1   MVYQPASGARDLLPLDVEKKRWIEDRLQQVFHRWGYHRIITSTLERMDTLMAG---EAIQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE-KHGPGRF 125
            + V  LQ+ +   + LR +LTA +AR V        +P R Y    VFR   +    R 
Sbjct: 58  RQMVIQLQNGEDDELGLRPELTASIARTVVTRMANATYPQRLYYNANVFRRTWESRHNRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           ++F Q  V+ +G+    A+AE+ +++AD L A+G++   +H+ +    I   +L     +
Sbjct: 118 QEFYQAGVELLGAGGLLANAEVLLLVADCLAALGLR--QWHLILGEAGITRSLLSAFPAN 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             DK+   +  L  I          ++        D +         +++ +  + S   
Sbjct: 176 LQDKVRSAIAHLDRITIDTLPLSDKLR--------DRAQIIMDLRGPSADVLQKVSSL-- 225

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL++   E    +K  +   +   +                 + +  ++++ ++YYTG 
Sbjct: 226 -DLDEEQREAVNNLKSLVELLESEKKF---------------PLILDLSLIQTIDYYTGI 269

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
           V+E +                 +G GGRYD L  +   + +N+P  GF + I  L   L 
Sbjct: 270 VFEVV--------NDTESQARVLGRGGRYDQLLGLYHPQRENIPGIGFGLSIEDLYQVLL 321

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGNQL 421
           S +                +     + +    Y Q LR +   +R E+ LG  ++     
Sbjct: 322 STQQLPQVTPAS---NYLVVPETGSANAAAFAYAQKLRDSTDLVRVEIDLG-GRDAEAIR 377

Query: 422 KYA-DRRNCPLAII 434
           +YA DR    +A I
Sbjct: 378 QYARDRSIAQIAWI 391


>gi|229114949|ref|ZP_04244361.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock1-3]
 gi|228668461|gb|EEL23891.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock1-3]
          Length = 420

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 167/433 (38%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I++
Sbjct: 114 LSGKYNEIVQSGIEIIGIDNVRAEIECVISVMQALQRLKVQS--FTIEIGQVELYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E V + GY    I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEIYEAVERLGYGP-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    V A G ++ ++++I 
Sbjct: 274 YYTGIIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-VSAVGLAVQVNQIIK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  + S         +       + + L++ +    +LR  G  A++ L S  N  + 
Sbjct: 323 ALQEQQESYEREPIDMMIHY-----ELNRLAEAERLRNLLRKDGKNAQLSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A        +
Sbjct: 376 FQFARNNKIVTVV 388


>gi|297295259|ref|XP_001087047.2| PREDICTED: histidyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 299

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 3/105 (2%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E  ++L     ++
Sbjct: 51  KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGED 110

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
              +K ++ L+D  G+ +SLRYDLT P ARY+A N  T +     
Sbjct: 111 ---SKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHI 152



 Score = 97.2 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 39/104 (37%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                     +         L +       L  AGI+AE+    +    NQL+Y +    
Sbjct: 191 QEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGI 250

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           PL  I G  E   G+++++ +   +E++   ++     + R  Q
Sbjct: 251 PLVAIIGEQELKDGVIKLRSVTSREEVNVRREDLVEEIKRRTGQ 294


>gi|254425097|ref|ZP_05038815.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Synechococcus sp. PCC 7335]
 gi|196192586|gb|EDX87550.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Synechococcus sp. PCC 7335]
          Length = 417

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 78/433 (18%), Positives = 155/433 (35%), Gaps = 43/433 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL--PDEDR 65
             + P G  D    ++  +  I D +  ++  +G+  I T  +E  D+L         + 
Sbjct: 10  TYQPPTGGRDLLPLDVVQKRWIEDRLEEVFCRWGYHRIITSTVETMDTLMAGGAIERIEV 69

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-PGR 124
               +  L    GQ + LR +LTA +AR       ++ +P R Y    VFR    G  G 
Sbjct: 70  LELQMNQL---GGQRLGLRPELTASIARAAVTRLASVTYPQRLYYNANVFRRSATGTQGG 126

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            +++ Q  ++ +GSS+  AD E+ +++AD L A+ +   D  I +    +   +L     
Sbjct: 127 QQEYHQAGIELLGSSSLMADIEVLLLVADCLSALNLS--DTCIVLGEAALTYSLLSPFPE 184

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              + + + +  L  +          ++ L        +           E    + +F 
Sbjct: 185 ERREAVRQSIAKLDRVALSGLALSDDLRSL--------ALRLMDLRGAPDEIFAKLANFD 236

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             + ++ +    + +                    R+ G +   + +  +++R  +YYTG
Sbjct: 237 LDEEQRVIAFQLKSLIDL-------------LNRQRQQGASIPSVILDLSLIRPFDYYTG 283

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E I                   GG   D L       +         +  +    ++
Sbjct: 284 IVFEVI-----------NGAQRVGQGGRYDDLLSVYDPVPSSEGFPGIGFVLNIEQLHRA 332

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AG-IRAEMFLGSSKNFGNQLK 422
           L   +   KE  P     +  D ++++    Y Q  R  A  +R EM L  +++      
Sbjct: 333 LLPDSQMPKETPPSDWLIVPRDENAVAAALSYAQKARESANVVRVEMSLDLNQSPDEVRA 392

Query: 423 YADRRNC-PLAII 434
            A +R    +A I
Sbjct: 393 IAHKRKINQIAWI 405


>gi|262197647|ref|YP_003268856.1| histidyl-tRNA synthetase 2 [Haliangium ochraceum DSM 14365]
 gi|262080994|gb|ACY16963.1| histidyl-tRNA synthetase 2 [Haliangium ochraceum DSM 14365]
          Length = 449

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 82/426 (19%), Positives = 148/426 (34%), Gaps = 43/426 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            LP G  D   +    R  I + +   +E++G+  I TPL E +D L + L   D     
Sbjct: 10  RLPSGVRDFLPRATARRRSIAERLLGEFESWGYARIITPLYECADVLERGLG-VDARQAA 68

Query: 70  VFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           +    +   G+ ++LR D+T  +AR  A +   I  P R    G V R ++ G    R+ 
Sbjct: 69  I-RFVEPGTGEVVALRPDMTPQVARMAATHLSDIDGPLRYCYEGAVTRMQR-GTRVQREI 126

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q  V+ +G+ A   DAE+  +    L  +G+  +   + + +  ++   L  I   G  
Sbjct: 127 LQAGVELIGAGAPEGDAEVLSVAVAALATMGL--DHVRLDLGHVALVRYALAAISQPGLR 184

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +                     ++ LL +                   +   +  L  + 
Sbjct: 185 R--------------------EIEALLAKKAHREVARLAADLPEPLPTLLGALPTLYGNP 224

Query: 249 EKSMHELYEL-VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           ++ +     L +  ++       E V+              I +    VRG EYYTG  +
Sbjct: 225 DEVLARARALPLPDSVLAALSTVEKVLALSREVAESELHATISLDLGEVRGFEYYTGTRF 284

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                     +     V   V  GGRYD L+ R+          + G +  I A+   +S
Sbjct: 285 ----------DGYAEGVGEPVLRGGRYDELLGRYGH-----AASATGFAVDIEAIAQAQS 329

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
           +         + +           +       LR  G+RA +  G  +     L+YA   
Sbjct: 330 ARGVALPAPALTVLVTTA-ETRRYEGIRVAAALRAQGLRAAVDPGQRRGLKTLLRYAAEV 388

Query: 428 NCPLAI 433
                +
Sbjct: 389 GFTHIL 394


>gi|225548084|ref|ZP_03769369.1| hypothetical protein RUMHYD_00063 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040760|gb|EEG51006.1| hypothetical protein RUMHYD_00063 [Blautia hydrogenotrophica DSM
           10507]
          Length = 434

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 115/433 (26%), Positives = 186/433 (42%), Gaps = 48/433 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K K       G  D   +E+ IRN +++ IR  Y  +GF  IETP +E+ ++L    
Sbjct: 16  MALKKKPTT----GMKDILPREMEIRNYVMNMIRETYGTFGFSSIETPCVEHIENLCSKQ 71

Query: 61  PDEDRPNKGVFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCR 107
             E+   K +F +     +                LRYDLT PL+RY + N + +  P +
Sbjct: 72  GGEN--EKLIFKILKRGEKLKLDQAENESDLVDSGLRYDLTVPLSRYYSNNANELPAPFK 129

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
             ++G V+R ++   GRFRQF+QCD+D +G S   A+ E+ +     L  +     ++ I
Sbjct: 130 ALQMGNVWRADRPQRGRFRQFMQCDIDILGESTYLAEIELILATTTLLGKLDF--ENFTI 187

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            +N+RK+L  + +  G   +        V   +DK+DK GL GV   L     + S   T
Sbjct: 188 RVNDRKLLKAMAQYSGFPEES----YDTVFIILDKMDKIGLNGVAEELKREGFEPSSVET 243

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
               L  E              + +    E +K  +  +    +L  I   V        
Sbjct: 244 Y-LGLFQEI---------TKDVEGVRYCKEKLKDVMDAKVA-EDLETIITSVDAVKTAKF 292

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
           +++   T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F G NV 
Sbjct: 293 KMEFDPTLVRGMSYYTGPIFEI----------AMDEFGGSVGGGGRYDEMIGKFTGNNVC 342

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           A GFSIG  R+++ L      T          +   +  +  L +     +  R  G++ 
Sbjct: 343 ACGFSIGFERIVMLLLERG-YTIPSASGRKAYLIEKNMPAVQLLEILKKAESERAQGVQV 401

Query: 408 EMF-LGSSKNFGN 419
            +  +  +K F  
Sbjct: 402 NLAIMKKNKKFQK 414


>gi|329930337|ref|ZP_08283926.1| ATP phosphoribosyltransferase, regulatory subunit [Paenibacillus
           sp. HGF5]
 gi|328935063|gb|EGG31549.1| ATP phosphoribosyltransferase, regulatory subunit [Paenibacillus
           sp. HGF5]
          Length = 397

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 87/407 (21%), Positives = 150/407 (36%), Gaps = 45/407 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D     +    RI   +    + +G+  I TP +EY D++G   
Sbjct: 1   MSKPKGF--EKPAGVRDYLPHAVTKLRRIEREVLACMDRWGYRQIMTPTMEYYDTVGVAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   + +F L +  G  + LR DLTAP+AR ++        P R      VFR  + 
Sbjct: 59  STSD---QKLFKLLNKRGTTMVLRSDLTAPIARVMSSLLKDEPLPVRLSYHANVFRAIEE 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ VG     ADAE+  +  ++L+A G+    + I + +   L+G+L+
Sbjct: 116 EAGREAEFFQTGVELVGDDTPEADAEVIALAIESLKAAGV--EKFKIAMGHMGYLNGLLQ 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++     +                    + +K  L         +     +LT  Q D +
Sbjct: 174 EVLPDRTE------------------DQESLKQDLLNRDYVGYRNTIASLSLTEVQQDQL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L +   + +      +            L  + E++      S  +    T++    
Sbjct: 216 EGILKLRGGREIAGQALEISSNELARASIEHLSKVWEVLEAYDV-SRHVLFDLTMLGDFS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  +E                   V  GGRYD L+ +F  + VPATGF++  +R++ 
Sbjct: 275 YYTGMTFEGYAAELG----------SPVASGGRYDKLLRQFG-RAVPATGFALKTNRILD 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            ++  E                + + +    +       LR  G   
Sbjct: 324 GVQGEEIVEELP--------ILIRYTASYRKEGLAKASELRAQGHSV 362


>gi|196047318|ref|ZP_03114532.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           03BB108]
 gi|229183699|ref|ZP_04310919.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           BGSC 6E1]
 gi|196021829|gb|EDX60522.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           03BB108]
 gi|228599742|gb|EEK57342.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           BGSC 6E1]
          Length = 420

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR           P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLAR--VMGTQRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LAGKYNEIVQSGIEVIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEK-----------VLRTYIESKNYAALSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G +  + L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|229195703|ref|ZP_04322466.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           m1293]
 gi|228587777|gb|EEK45832.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           m1293]
          Length = 420

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR +         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIVQSGIEIIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEK-----------VLRTYIESKNYAALSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   I++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIEKLGYGS-YISIDLGIIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G +  + L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|317050373|ref|YP_004111489.1| Histidine--tRNA ligase [Desulfurispirillum indicum S5]
 gi|316945457|gb|ADU64933.1| Histidine--tRNA ligase [Desulfurispirillum indicum S5]
          Length = 386

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 82/409 (20%), Positives = 158/409 (38%), Gaps = 47/409 (11%)

Query: 1   MGKKTKLRAE-LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M     +  + +P+GF      + R    +   + +I++++G+ PI TP LEY D + + 
Sbjct: 1   MNTPGTMEPKDIPKGFRASIGPQARTIFSLEKDMVDIFQSWGYQPILTPSLEYEDVIARA 60

Query: 60  LPDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           L +   P+   + + D   G+ + LR D T  +AR  +     +    R    G VFR+ 
Sbjct: 61  LDENTLPS--TYRIIDSITGRVLLLRPDFTPSIARAYSTATTKLGDCVRLCYSGSVFRSI 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
               G   Q +Q   + +G S+  AD E   +    +  V     +  +   + + + GI
Sbjct: 119 NKHEGNQAQVVQAGGEFLGCSSLEADFEAIALCVHAIGQVSSHGLNLVL--THSRFIGGI 176

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           L  + +                   +    + +   L +       +  + +  T    +
Sbjct: 177 LAALEV-------------------EPAMEKAIVSALHKKDLSALKELLEQSGTTYHNRE 217

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +++    +  + S+ +    +       +  +EL  + + +   G    RI +  + +  
Sbjct: 218 VLLKLPGLIGDTSLIDRARSLVCNETSHRALDELGALLQKLEHIGC---RITLDLSELSY 274

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L YYTGC +E       M           V GGGRYD LV ++     PA GF++ I+ L
Sbjct: 275 LNYYTGCSFELYDEECGM----------KVAGGGRYDNLVGKYTH-PTPAVGFAVNINHL 323

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             A            +   ++   +  +SD+L + Q   + LR  G  A
Sbjct: 324 CEA--------GLRNQHEILVDYVVYSESDTLEQAQQEVERLRRQGHSA 364


>gi|261404019|ref|YP_003240260.1| ATP phosphoribosyltransferase regulatory subunit [Paenibacillus sp.
           Y412MC10]
 gi|261280482|gb|ACX62453.1| histidyl-tRNA synthetase 2 [Paenibacillus sp. Y412MC10]
          Length = 397

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 87/407 (21%), Positives = 150/407 (36%), Gaps = 45/407 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D     +    RI   +    + +G+  I TP +EY D++G   
Sbjct: 1   MSKPKGF--EKPAGVRDYLPHAVTKLRRIEREVLACMDRWGYRQIMTPTMEYYDTVGVAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   + +F L +  G  + LR DLTAP+AR ++        P R      VFR  + 
Sbjct: 59  STSD---QKLFKLLNKRGTTMVLRSDLTAPIARVMSSLLKDEPLPVRLSYHANVFRAIEE 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ VG     ADAE+  +  ++L+A G+    + I + +   L+G+L+
Sbjct: 116 EAGREAEFFQTGVELVGDDTPEADAEVIALAIESLKAAGV--EKFKIAMGHMGYLNGLLQ 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++     +                    + +K  L         +     +LT  Q D +
Sbjct: 174 EVLPDRTE------------------DQESLKQDLLNRDYVGYRNTIASLSLTEVQQDQL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L +   + +      +            L  + E++      S  +    T++    
Sbjct: 216 EGILKLRGGREIAGQALEISSNELARASIEHLSKVWEVLEAYDV-SRHVLFDLTMLGDFS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  +E                   V  GGRYD L+ +F  + VPATGF++  +R++ 
Sbjct: 275 YYTGMTFEGYAAELG----------SPVASGGRYDKLLRQFG-RAVPATGFALKTNRILD 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            ++  E                + + +    +       LR  G   
Sbjct: 324 GVQGEEIVEELP--------ILIRYTASHRKEGLAKASELRAQGHSV 362


>gi|331086131|ref|ZP_08335213.1| hypothetical protein HMPREF0987_01516 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406290|gb|EGG85804.1| hypothetical protein HMPREF0987_01516 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 415

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 106/429 (24%), Positives = 182/429 (42%), Gaps = 48/429 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   +E++IR+ ++  I+  Y  +GF  IETP +E+ ++L      E+  
Sbjct: 3   LKKKPVTGMKDMLPREMQIRDYVIRLIKETYGTFGFSSIETPCVEHIENLSSKQGGEN-- 60

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY + N   +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLKLDTAECEADLVDGGLRYDLTVPLSRYYSNNVSELPSPFKALQMGN 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+ +     L  +  K     I      
Sbjct: 121 VWRADRPQRGRFRQFMQCDIDILGEPNNLAEIELILATTTLLGKLDFKNFTVRIND---- 176

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
               IL+ +  +   +  +   V   +DK+DK GL GV+  L E                
Sbjct: 177 --RKILKAMAAYSGFEEKDYDDVFIILDKMDKIGLDGVEKELQEH------------GYP 222

Query: 234 SEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E ++  +       +  + +    E ++G +  E   + L +I   V        ++  
Sbjct: 223 KEAVEKYLQLFKEITNDIEGVRYCKEKLEGYLE-EATADGLEMIIASVDSVKEADFKLSF 281

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQ  PA GF
Sbjct: 282 DPTLVRGMSYYTGTIFEI----------AMDEFGGSVGGGGRYDEMIGKFTGQPTPACGF 331

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF- 410
           SIG  R+++ L           +    L+       + + +   + +  R  G +  +  
Sbjct: 332 SIGFERIVMLLLERG-YEIPDNKEKLALLIEKGMPQEKMLEVLAFAKEQRATGKQVMLSI 390

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 391 MKKNKKFQK 399


>gi|255505310|ref|ZP_05345355.3| histidine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255268737|gb|EET61942.1| histidine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 418

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 103/431 (23%), Positives = 176/431 (40%), Gaps = 44/431 (10%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           ++  L+ +   G  D   +E+ IR+ ++  I+  Y  +GF  IETP +E+ ++L      
Sbjct: 2   RQMSLKKKPVTGMKDITPREMEIRDYVIGLIKETYGKFGFSSIETPCVEHIENLSSKQGG 61

Query: 63  EDRPNKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTY 109
           E+   K +F +     +                LRYDLT PL+RY + N + +  P +  
Sbjct: 62  EN--EKLIFKILKRGEKLKLETAQCEADLVDGGLRYDLTVPLSRYYSNNANELPAPFKAL 119

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
           ++G V+R ++   GR+RQF+QCD+D +G  +  A+ E+ +  +  +  +     ++ I I
Sbjct: 120 QMGNVWRADRPQRGRYRQFMQCDIDILGEPSILAEIELILATSTLVGKLDF--ENFTIRI 177

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           N+R+IL  +    G   +        V   +DK+DK GL+GV   L +         T  
Sbjct: 178 NDRRILKAMAAYSGFAPES----YDTVFIILDKMDKIGLEGVAQELKKEGFAEEAVQTY- 232

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                     +  F  +  + +           +  E    +L  I E V         I
Sbjct: 233 ----------LGLFEKVTGDLAGVRFLRQTLAGVLEESVAADLETIIESVEAVKNAKFNI 282

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
               T+VRG+ YYTG ++E  +     +               RYD ++ RF G   PA 
Sbjct: 283 VFDPTLVRGMSYYTGPIFEISIDGFGGSVGGGG----------RYDEMIGRFTGNPTPAC 332

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           GFSIG  R+++ L   +      K      +       D L       +  R  G+   M
Sbjct: 333 GFSIGFERIVMLLLEKD-FQIPGKAEKTAFLIEKGMPEDKLLDVFREAEKRRAEGVCVSM 391

Query: 410 -FLGSSKNFGN 419
             +  +K F  
Sbjct: 392 NMMKKNKKFQK 402


>gi|229074693|ref|ZP_04207714.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock4-18]
 gi|228708436|gb|EEL60588.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           Rock4-18]
          Length = 420

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 166/433 (38%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R+ +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRHTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR +           +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVIGTQRWDTP--LKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +   L+ + ++   + I I   ++   I+ 
Sbjct: 114 LSGKYNEIVQSGIEIIGIDNIRAEIECVISVMQALQRLKVQS--FTIEIGQVELYKCIVR 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHDEEER-----------VLRTYIESKNYAALSNFIGEKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E V + GY    I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEIYEAVERLGYGP-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    V A G ++ +++++ 
Sbjct: 274 YYTGIIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-VSAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  + S         +       + + L + +    +LR  G  A++ L S  N  + 
Sbjct: 323 ALQEQQESYEREPIDMMIHY-----ELNRLEEAERLRNLLRKDGKNAQLSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A        +
Sbjct: 376 FQFARNNKIVTVV 388


>gi|154687614|ref|YP_001422775.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           amyloliquefaciens FZB42]
 gi|166219818|sp|A7Z968|HISZ_BACA2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|154353465|gb|ABS75544.1| HisZ [Bacillus amyloliquefaciens FZB42]
          Length = 390

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 75/401 (18%), Positives = 155/401 (38%), Gaps = 46/401 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D        + ++  ++ ++ + +G+  +ETP LE+ ++            +
Sbjct: 4   FEKPHGMRDTLPGLYEAKKKVRSTLTDLIDKWGYQFMETPTLEFYET---VGVQSAIEEQ 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D DG+ + LR D+T P+AR  A        P R      V+R ++   GR  +F
Sbjct: 61  QLFKLLDQDGKTLVLRPDMTGPIARVAASKLHKHNHPLRAGYAASVYRAQEREGGRPAEF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G  + +ADAE+  + A  L+  G+ R  + I I +  + D +  ++  + + 
Sbjct: 121 EQVGAELIGDGSTSADAEVIALAAGALKNAGLHR--FKIAIGHAGLADELFVEVLGNAER 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                                 ++  L E       +  K   L+S     +++ L +  
Sbjct: 179 A-------------------DVLRRFLFEKNYVGYREHVKSLPLSSIDKSRLLALLELRG 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            K +    E + G I+G+    EL  + +++   G     I++   +V  + YYTG ++E
Sbjct: 220 GKEICAKAEEIIG-ISGQSLIQELEDLWDILEDYGCAE-HIRLDLNMVSHMSYYTGILFE 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                              +G GGRY+ L+  F          +    R+   +++L   
Sbjct: 278 VYAANVGF----------VIGSGGRYNNLLGHF----GSPAPATGFGLRIDRLIEALGIQ 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               +         +    +  ++  ++ +  R  G +  +
Sbjct: 324 EETSEAD------AVIFSKEQRAQAILFAEEERARGRKVVL 358


>gi|325662328|ref|ZP_08150937.1| hypothetical protein HMPREF0490_01676 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471330|gb|EGC74553.1| hypothetical protein HMPREF0490_01676 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 415

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 106/429 (24%), Positives = 182/429 (42%), Gaps = 48/429 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D   +E++IR+ ++  I+  Y  +GF  IETP +E+ ++L      E+  
Sbjct: 3   LKKKPVTGMKDMLPREMQIRDYVIRLIKETYGTFGFSSIETPCVEHIENLSSKQGGEN-- 60

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY + N   +  P +  ++G 
Sbjct: 61  EKLIFKILKRGEKLKLDTAECEADLVDGGLRYDLTVPLSRYYSNNVSELPSPFKALQMGN 120

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G     A+ E+ +     L  +  K     I      
Sbjct: 121 VWRADRPQRGRFRQFMQCDIDILGEPNNLAEIELILATTTLLGKLDFKNFTVRIND---- 176

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
               IL+ +  +   +  +   V   +DK+DK GL GV+  L E                
Sbjct: 177 --RKILKAMAAYSGFEEKDYDDVFIILDKMDKIGLDGVEKELQEH------------GYP 222

Query: 234 SEQIDIMVSFLSI--DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E ++  +       +  + +    E ++G +  E   + L +I   V        ++  
Sbjct: 223 KEAVEKYLQLFKEITNDIEGVRYCKEKLEGYLE-EATADGLEMIIASVDSVKEADFKLSF 281

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQ  PA GF
Sbjct: 282 DPTLVRGMSYYTGTIFEI----------AMDEFGGSVGGGGRYDEMIGKFTGQPTPACGF 331

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF- 410
           SIG  R+++ L           +    L+       + + +   + +  R  G +  +  
Sbjct: 332 SIGFERIVMLLLERG-YEIPDNKEKLALLIEKGMPQEKMLEVLAFAKEQRAVGKQVMLSI 390

Query: 411 LGSSKNFGN 419
           +  +K F  
Sbjct: 391 MKKNKKFQK 399


>gi|229029182|ref|ZP_04185275.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH1271]
 gi|228732090|gb|EEL82979.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           AH1271]
          Length = 420

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 171/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     + ++   D+ G+ I LR D+T PLAR           P +    G VFR  + 
Sbjct: 56  QNRPIDEEKMYKFFDEKGRIIVLRPDMTIPLAR--VMGTQRWDTPLKLTYGGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + IQ  ++ +G     A+ E  + +  +L+ V ++   + I I   ++   I++
Sbjct: 114 LTGKYNEIIQSGIEIIGIDNVRAEIECVISVIQSLQKVKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     +   D         E + ++
Sbjct: 172 KLSIHEEEER-----------VLRTYIESKNYAALSNFIREKKLDRC------DETVRLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I   + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAIARVKEIYVAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +         + ++ + L++ +    +L+  G + E+ L S  N  + 
Sbjct: 323 ALQEQQEPYERKRID-----IIIHYELNRLAEAERLRSLLQKDGKKVELSLFS--NVNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|270593891|ref|ZP_06221467.1| histidine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270318409|gb|EFA29538.1| histidine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 131

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 2/123 (1%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSL 73
             DC   E  +   I   +RN+  +YG+  +  P++E +    + + +  D  +K +++ 
Sbjct: 1   MNDCAPTESPLWQWIEAQVRNVLNSYGYSEVRMPIVESTPLFARAIGEVTDVVSKEMYTF 60

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D + + ++LR + TA   R   E+        R + IGP+FR+E+   GR+RQF Q  V
Sbjct: 61  WD-NDEQLTLRPEGTAGCVRAAIEHGWIYNNEQRLWYIGPMFRHERPQKGRYRQFHQVGV 119

Query: 134 DNV 136
           +  
Sbjct: 120 EVF 122


>gi|291541880|emb|CBL14990.1| Histidyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 97

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 1/95 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
           L  +  +G  D   KE      +   +R    +YGF  I TP+ E+++   + +    D 
Sbjct: 3   LITKKIKGTEDVLPKESYKWQFVEKIMREEARSYGFREIRTPVFEHTELFARGVGQTTDV 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD 100
             K +++     G+ ++LR + TA  AR V E+  
Sbjct: 63  VQKEMYTFDTKGGESVTLRPEGTAGAARAVLEHAL 97


>gi|218902612|ref|YP_002450446.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           AH820]
 gi|228926536|ref|ZP_04089607.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229121045|ref|ZP_04250285.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           95/8201]
 gi|226702194|sp|B7JFY9|HISZ_BACC0 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|218537653|gb|ACK90051.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus cereus
           AH820]
 gi|228662374|gb|EEL17974.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus cereus
           95/8201]
 gi|228833124|gb|EEM78690.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 420

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR V         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVVGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LAGKYNEIVQSGIEVIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEK-----------VLRTYIESKNYASLSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    + +  G +  + L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLFQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|297740936|emb|CBI31248.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 8/150 (5%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPN 67
            +LP+G  D   +++ +R +    I ++++ +G   ++TP+ E  ++L GK+  D    +
Sbjct: 411 PKLPKGTRDFAKEQMAVREKAFSIIGDVFKRHGAMALDTPVFELRETLMGKYGED----S 466

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++ L D  G+  SLRYDLT P ARYVA N  T     + Y+I  V+R +    GR+R+
Sbjct: 467 KLIYDLADQGGELCSLRYDLTVPFARYVAMNGLT---SFKRYQIAKVYRRDNPSKGRYRE 523

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           F QCD D  G           + +   L  
Sbjct: 524 FYQCDFDIAGQYESMGPDFEVIKILTELLD 553


>gi|326428273|gb|EGD73843.1| hypothetical protein PTSG_12336 [Salpingoeca sp. ATCC 50818]
          Length = 363

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 3/104 (2%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            +   + P+G  D   +++ IRN++ D+I ++++ +G   IETP++E  D L     ++ 
Sbjct: 49  NQFLLKTPKGTRDYGPEKMYIRNKVFDTIVSVFKKHGAVSIETPVMELKDILTGKYGED- 107

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
             +K ++ L D  G+ ++LRYDLT P AR+VA+N    +     
Sbjct: 108 --SKLIYDLADQGGEELALRYDLTVPFARFVAQNGIKHIKRYHI 149


>gi|153874705|ref|ZP_02002823.1| Histidyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152068830|gb|EDN67176.1| Histidyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 140

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 9/128 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK+    +  +G  D    +      I D IR++ E YG+  I  PL+E +D   + +
Sbjct: 1   MAKKS---IQAVKGMNDILPTQTPHWQYIEDIIRDVLEIYGYQEIRFPLVEMTDLFNRSI 57

Query: 61  PD-EDRPNKGVFSLQDDDGQ-----WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            +  D   K +F+ QD   +      +SLR + TA   R   E+   I+ P      GP 
Sbjct: 58  GEVTDIVEKEMFTFQDRPDKNNKADSLSLRPEGTASCVRAGIEHGLFIIKPNVCGISGPC 117

Query: 115 FRNEKHGP 122
           F  + H  
Sbjct: 118 FAMKIHKE 125


>gi|157693880|ref|YP_001488342.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus pumilus
           SAFR-032]
 gi|167017140|sp|A8FHR5|HISZ_BACP2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|157682638|gb|ABV63782.1| histidine synthesis ATP phosphoribosyltransferase [Bacillus pumilus
           SAFR-032]
          Length = 391

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 86/402 (21%), Positives = 156/402 (38%), Gaps = 47/402 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D        + ++  S+  +   +G+  +ETP LE+ D++G      D    
Sbjct: 4   FEKPYGMRDSLPGLYETKKKVRHSLTEVMNGWGYRLMETPTLEFYDTVGVQSAITDT--- 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D +GQ + LR D+T P+AR  A       +P R      VFR ++   GR  +F
Sbjct: 61  QLFKLLDQNGQTLVLRPDMTGPIARVAASKLHEQAYPLRVGYAANVFRAQEREGGRPSEF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G  + +ADAE+  ++   L+  G+      I          + E + +    
Sbjct: 121 EQVGIELIGDGSISADAEVIALVVFALKNAGLNSFKIAI------GHVALAETLFV---- 170

Query: 189 KLNERLIVLRAIDKLDKFGL-QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                       D L        ++  L E          K   L+S     ++  L + 
Sbjct: 171 ------------DVLGNTERANVLRRFLYEKNYVGYRQHVKQLPLSSIDKTRLLQLLELR 218

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + E  E +  +  G++   +L  + E +   G     I++  ++V  + YYTG ++
Sbjct: 219 GGREVTERAEEIVVSQEGKEVLAQLKSLWETLEDYGCTE-YIRLDLSMVSHMSYYTGILF 277

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                   +G GGRYD L++ F     PATGF + + RL+ AL   E 
Sbjct: 278 EVFADHVG----------SVIGSGGRYDQLLAHFN-APAPATGFGLRLDRLLEALDVKEI 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           +              +    +   +   + +  R+ G +  +
Sbjct: 327 NEPQE---------AVIFSKEQRLEAFAFAEKERSKGKKIVL 359


>gi|300087758|ref|YP_003758280.1| histidine--tRNA ligase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527491|gb|ADJ25959.1| Histidine--tRNA ligase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 412

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 87/410 (21%), Positives = 155/410 (37%), Gaps = 49/410 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     RG AD   +++           +    +G+  I TPLLEY              
Sbjct: 1   MTFNRCRGCADLGPQDMLKFRLAETIFTDTALKWGYQEIRTPLLEYLTLFTSAGKLTPGM 60

Query: 67  NKGVFSLQDDD---GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + V+S  D D   G+ + LR D T P+ARY  +N        R + I  VFR   +   
Sbjct: 61  LRQVYSFLDWDGWSGERVVLRPDGTIPIARYYVDNMKPQTTS-RLFYIIDVFRFSDNQE- 118

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
             R+  Q   + +G  A TADAE+  M A++LE +GI      + I++  ++  IL ++ 
Sbjct: 119 DQRERWQLGAELIGGPATTADAELVTMAAESLELMGI---TPTVKISHSGLIQSILNRLE 175

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              + +      +L   D                 +          A L       ++  
Sbjct: 176 PDEELRHKLFDEILDGKD--------------ANLKALKQRRPEISAGLN------LLLN 215

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           ++      +  +  L     A     ++     +L+    ++    +I     +G EYYT
Sbjct: 216 VTGTSSDFLANVQALFHDEEAIRASIDDFKKSLQLLDSLNFS---YEIDLASGKGFEYYT 272

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G ++  ++G  ++             GGGRYD L+++  G+ VPA GF++  +++   L 
Sbjct: 273 GMIFHLVVGDSIVG------------GGGRYDNLIAQMGGKAVPAAGFALYFNKIADLLD 320

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                  +I  +       ++      S        LR +G  AE+ LG 
Sbjct: 321 ------VDIYSLDEPDRFLVEFSDGEESTAFALAGALRDSGYTAELRLGD 364


>gi|194015309|ref|ZP_03053925.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus pumilus
           ATCC 7061]
 gi|194012713|gb|EDW22279.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus pumilus
           ATCC 7061]
          Length = 391

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 86/402 (21%), Positives = 157/402 (39%), Gaps = 47/402 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D        + ++  S+  +   +G+  +ETP LE+ D++G      D    
Sbjct: 4   FEKPYGMRDSLPGLYETKKKVRHSLTEVMNGWGYRLMETPTLEFYDTVGVQSAITDT--- 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D +GQ + LR D+T P+AR  A       +P R      VFR ++   GR  +F
Sbjct: 61  QLFKLLDQNGQTLVLRPDMTGPIARVAASKLHEQAYPLRVGYAANVFRAQEREGGRPSEF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G  + +ADAE+  ++   L+  G+K     I          + E + +    
Sbjct: 121 EQVGIELIGDGSISADAEVIALVVFALKNAGLKSFKIAI------GHVALAETLFV---- 170

Query: 189 KLNERLIVLRAIDKLDKFGL-QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                       D L        ++  L E          K   L+S     ++  L + 
Sbjct: 171 ------------DVLGNTERANVLRRFLYEKNYVGYRQHVKQLPLSSIDKTRLLQLLELR 218

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + E  E +  +  G++   +L  + E +         I++  ++V  + YYTG ++
Sbjct: 219 GGQEVTERAEEIVVSQEGKEVLTQLKSLWETLEDYDCTE-YIRLDLSMVSHMSYYTGILF 277

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                   +G GGRYD L++ F     PATGF + + RL+ AL + E 
Sbjct: 278 EVFADHVG----------SVIGSGGRYDQLLAHFD-APAPATGFGLRLDRLLEALDAKEI 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           +              +    +   +   + +  R+ G +  +
Sbjct: 327 NEPQE---------AVIFSKEQRLEAFAFAEKERSKGKKIVL 359


>gi|150388407|ref|YP_001318456.1| histidine--tRNA ligase [Alkaliphilus metalliredigens QYMF]
 gi|167017139|sp|A6TKS9|HISZ_ALKMQ RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|149948269|gb|ABR46797.1| Histidine--tRNA ligase [Alkaliphilus metalliredigens QYMF]
          Length = 396

 Score =  128 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 92/433 (21%), Positives = 161/433 (37%), Gaps = 44/433 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +  LP G  D   K+   R  I   +   +   G+  + +P LEY D   +      R N
Sbjct: 5   KVFLPEGVQDLLMKDCHHRRLIEGRLMEEWVKQGYMEVSSPTLEYYDLF-RQGEQMLRGN 63

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K +F L D  G  + LR D T P+AR VA     +V+P +   I  +FR ++   G+ R+
Sbjct: 64  K-MFKLIDAKGDLLVLRPDGTLPIARMVATKMKDMVYPLKICYIQDIFRLDQEQAGKQRE 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+  G  +  AD ++ +   ++L+A+G+   D+ I I   KIL  IL+ + +  D
Sbjct: 123 FRQAGVEVFGVESYEADGQVIITAIESLKALGLS--DFQIEIGQTKILQSILDSMAVTTD 180

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +K                     + +L+            +  ++  +   I+    ++ 
Sbjct: 181 EK-------------------DEIIMLIHNKNFSTLESLLEKLDIDPKTRLILKEIPNLF 221

Query: 248 L-EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              + + E    +      ++   EL  I  +++  G+    I +   +   L YYTG +
Sbjct: 222 GTPQGVMESVAALPINDNIKRALEELQQICHMIQAYGFGQ-YISVDLGMTAPLGYYTGII 280

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           ++                   +  GGRYD L+  F          +     +    K+L 
Sbjct: 281 FKGFTKDLGT----------ILCSGGRYDRLLMSFGM----NCPATGFALLIDQIRKALH 326

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YAD 425
                 KE GP     + H+       +     L+  G   E+ L         +  YA 
Sbjct: 327 LGQQKKKESGPPYYLLVSHEGRHEEVAKE-ATRLKKTGCIVEVSLLKDP---QAIDIYAK 382

Query: 426 RRNCPLAIIQGTG 438
           RR     I  G  
Sbjct: 383 RRGVDKIIEIGEK 395


>gi|294501783|ref|YP_003565483.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           megaterium QM B1551]
 gi|295707133|ref|YP_003600208.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           megaterium DSM 319]
 gi|294351720|gb|ADE72049.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           megaterium QM B1551]
 gi|294804792|gb|ADF41858.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           megaterium DSM 319]
          Length = 393

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 90/407 (22%), Positives = 164/407 (40%), Gaps = 47/407 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D        + ++ + + +   ++G+  + TP +EY +++G   
Sbjct: 1   MSK--LFMFEKPLGMRDTLPALFERKKQVRNQLADEIGSWGYQYMATPTVEYYETVGSAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 ++ +F L D +G  + LR D+T P AR  A        P R      VFR ++ 
Sbjct: 59  A---ILDQQLFKLLDKEGHTLVLRPDVTTPFARVAASKLLN-NSPLRLAYEANVFRAQQR 114

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ +G +  ++DAE+  +M   L+  G+K   + + I +   ++ +  
Sbjct: 115 EGGRPAEFEQIGVELIGDATMSSDAEVIALMIGALKRAGLKS--FKVAIGHIGFVNSLFL 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I  + +                       ++  L E       +  K  NL+S     +
Sbjct: 173 EIVGNEERA-------------------NVLRRFLYEKNYVGYRNHVKDLNLSSIDKQRL 213

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L++  ++   E    +    AG+K   +L  +  ++   G  ++ IKI   +V  + 
Sbjct: 214 LQLLNLRGDEKKIEEAVELVENEAGKKAAGDLKKLWNMLDAYGV-TDEIKIDFNLVSHMS 272

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG ++E        +          +G GGRYD L+ +F     PATGF I + RLI 
Sbjct: 273 YYTGILFEVFAENVGFH----------IGNGGRYDQLLEKFA-SKTPATGFGIQLDRLIE 321

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           AL          +   P  +  + +  + L +        R  G R 
Sbjct: 322 ALGE--------EVYEPSAVYGILYSQERLDEALALAAEQRKQGYRV 360


>gi|225848411|ref|YP_002728574.1| histidyl-tRNA synthetase (histidine--tRNA ligase)(HisRS)
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644232|gb|ACN99282.1| putative histidyl-tRNA synthetase (Histidine--tRNA ligase)(HisRS)
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 423

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 92/435 (21%), Positives = 164/435 (37%), Gaps = 45/435 (10%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K  KL+ +LP+G      ++  + + I  +I N ++ +G+D I  P +EY D        
Sbjct: 4   KGKKLKIDLPKGVRCFNVEDSFLLDHIEKTIENTFKVWGYDKITLPTIEYYDVHSHIFSP 63

Query: 63  EDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           + R  K +F + D  +G+ + LR D T  +ARYVA       FP R Y  G VFR     
Sbjct: 64  DIR--KNLFRIIDRFEGEILILRVDFTTQIARYVAS-LKDKDFPIRLYYCGDVFRYTVPK 120

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
             +  +  Q  ++ +G S   ADAE+  +   +L+ +GI+     I          + + 
Sbjct: 121 GDKLYERKQIGIELIGVSQLEADAEVLAVATSSLKNLGIENFQIDINNI------KLFQV 174

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +    +   NE    L  I   + + L+                F +  N+  +    ++
Sbjct: 175 LKQLLNLSQNEYQEFLSCIKNREIYKLE---------------SFVQHLNIDKKLKSFII 219

Query: 242 SFLSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           S  +++     +    + +K   A  +   E + I  ++++   +   +    +  R  +
Sbjct: 220 SLPTLNGSIDMIKAQADQLKDYPAIYQVLQEFIKIYTILQEYDLHK-HVFFDLSEPREFD 278

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E  +                   GGRYD L+S     + PATGF+     L  
Sbjct: 279 YYTGMVFEIFIKDFPKPVGY----------GGRYDRLLS-MYNDDYPATGFAFDTLYLFD 327

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            LK L       K+     I     D           + LR  G      +   +     
Sbjct: 328 YLKKLTLDLKPQKD---YYIIDTTEDKTL---AYQIAKYLREKGFSVARDI-VKREVEKS 380

Query: 421 LKYADRRNCPLAIIQ 435
           + +A +      I+ 
Sbjct: 381 MDFAFKNGFKKVIVI 395


>gi|225849903|ref|YP_002730137.1| putative histidyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645991|gb|ACO04177.1| putative histidyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 419

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 91/455 (20%), Positives = 168/455 (36%), Gaps = 44/455 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++P G       E      I D I  I+E +G++ I  P  E+     +   +E   
Sbjct: 1   MNIDIPAGVRVYNRIETSQIKYIQDRISEIFERWGYEEITLPSFEFFSVHSRGFGEEIEN 60

Query: 67  NKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               F   D + G+ ++LR D T+ +ARY A        P R Y  G +FR       R 
Sbjct: 61  RA--FKFIDRNSGEILTLRADFTSQIARYFAS-LKKKTVPKRYYYSGDIFRYVIPKADRL 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  V+ +G     ADAE+  +   +LE +GIK     I           ++     
Sbjct: 118 WERKQMGVELIGVKELEADAEVIAVAVQSLENLGIKNYQIDINN---------VKIFDTV 168

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR-TDNSGDFTKGANLTSEQIDIMVSFL 244
            D    +R   +  +D + K  +  ++  + +    D   +F          I ++ +  
Sbjct: 169 KDLLGLDRESFITFMDYVRKREVYSIERFISDFDVEDRLKEFVVRIPEIQGDITVIQNL- 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
               ++ + +  EL+K   + EK +N L             S+R+       +   YYTG
Sbjct: 228 ----KEELKDFPELIKSLESIEKVYNILSDY--------GISDRVIFDIGEPKEFSYYTG 275

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E  +                +G GGRYD L+S++ G        + G +  ++ +  
Sbjct: 276 IVFEIFIRDYS----------RPIGQGGRYDSLISKYDGNIP-----ATGFAFDLLNIWE 320

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               +  I E+       +D   +  S      ++LR  G      +   + F   L++A
Sbjct: 321 YMKLSGRIHEIKKKDFFIIDLTREKRS-AYRIGKILREKGYSVGRDI-VKREFKKSLEFA 378

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
                  AI+ G     + +     +   ++L+ E
Sbjct: 379 FEEGYSKAIVIGLDSTEKDIYIYSSMDSFEKLNLE 413


>gi|160879160|ref|YP_001558128.1| histidine--tRNA ligase [Clostridium phytofermentans ISDg]
 gi|160427826|gb|ABX41389.1| Histidine--tRNA ligase [Clostridium phytofermentans ISDg]
          Length = 413

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 112/429 (26%), Positives = 188/429 (43%), Gaps = 56/429 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++    +G  +    E+ +R+ + + I   Y+++GF  I TP++E  ++L      E+  
Sbjct: 1   MKISTVKGMNEYSPNEVLLRDYLQNVILTTYQSFGFQKISTPIMEDIENLENSEGGENL- 59

Query: 67  NKGVFSLQDDDGQ--------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIG 112
            K +F +     +               + LRYDLT PL RYVA N   +  P R  +I 
Sbjct: 60  -KLLFKVLKRGDKLEKDLSDGNYENLADLGLRYDLTLPLCRYVANNKFKLPTPFRCIQID 118

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            V+R E+   GR R+F+QCD+D +G+ +  A+ E+    A  L  +GI+  D+ + INNR
Sbjct: 119 RVYRAERPQKGRLREFVQCDIDIIGTDSCNAEIELITTTAKALGEIGIQ--DFAVKINNR 176

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
           K+L+ +L  +G   D    +   V  + DK+ K G+ GVK  L                 
Sbjct: 177 KLLNTLLLSLGFTKD----QLEGVCISFDKMSKIGIGGVKTEL------------MQKGC 220

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             + I   ++ LS ++  S+  + E+             L  I     +   +  R++  
Sbjct: 221 DEDAITKFMNLLS-NMPISLDTMREICGENEDIRS----LETIINSCSRISNDQYRMEFD 275

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
            ++VRG  YYTG V+E +               GS+ GGGRYD L+ +F  + +PA GFS
Sbjct: 276 LSLVRGQSYYTGAVFEIVSNDWN----------GSIAGGGRYDNLIGKFTNEVIPAVGFS 325

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           IG  R+   L        N+K+   + +   +   + L +   Y Q      I   +   
Sbjct: 326 IGFERIYQMLLENNYQIPNMKKRLAI-VYKKEAIVEVLQEAAKYQQDF---DI---VLYE 378

Query: 413 SSKNFGNQL 421
              N   Q+
Sbjct: 379 EKSNVRKQI 387


>gi|237755416|ref|ZP_04584042.1| histidine--tRNA ligase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692416|gb|EEP61398.1| histidine--tRNA ligase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 415

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 103/455 (22%), Positives = 180/455 (39%), Gaps = 46/455 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ +LP+G      KE  I + I  SI + ++ +G++ +  PLLEY D+    L +E   
Sbjct: 1   MKIDLPKGVRTFNPKESFILSWIEKSIEDNFKLWGYEKVILPLLEYYDAHKNVLNEEIL- 59

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K  F L D  +G+ + LR D T  +ARY+A       FP R Y  G VFR         
Sbjct: 60  -KNTFRLVDRYEGETLILRPDFTVQIARYIAS-LQEKEFPVRLYYTGDVFRYVVPKGDNL 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  V+ +G     ADAE+  +   +L+ +     ++ I +NN KI   I + + L 
Sbjct: 118 YEKKQIGVELIGVDKIEADAEIIAIAISSLKKL--SIENFQIDVNNVKIFKAITKILNLS 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D                     + + L L      N   F K  ++ ++  D +++   
Sbjct: 176 QDQ-------------------TKELFLYLKNREIYNIQAFLKDFDVNNKIKDFILNLPK 216

Query: 246 IDLEKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           ++++   + EL +  +          EL+VI +++++       I       R   YYTG
Sbjct: 217 LNIKADRLKELAKEYEDIEEISNALKELIVIYKILKEY-QLDEYIVFDLCEPREFSYYTG 275

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E  +                +G GGRYD L+S + G +      + G +  ++A+  
Sbjct: 276 IVFEIFIKDFPK----------IIGYGGRYDNLLSNYNGNHP-----ATGFAFDLLAIYD 320

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               T  IK      I     D           + LRT G      +   ++    + +A
Sbjct: 321 YIIKTIEIKNEKDFYIIDTTEDKKL---AYNIAKNLRTKGYTVARDII-KRDIDLSIDFA 376

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            +      I+       + +  +KD  K +E S E
Sbjct: 377 FKNGYKNVILITVENSGKKVYILKDKNKKEEASLE 411


>gi|158337117|ref|YP_001518292.1| ATP phosphoribosyltransferase regulatory subunit [Acaryochloris
           marina MBIC11017]
 gi|158307358|gb|ABW28975.1| ATP phosphoribosyltransferase regulatory subunit [Acaryochloris
           marina MBIC11017]
          Length = 405

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 144/399 (36%), Gaps = 48/399 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P G  D    ++  +  I   +  +++ +G+  I TP LE  D+L      + +   
Sbjct: 5   YQPPAGARDLLPLDVAQKCWIEQRLLQVFQRWGYHRIITPTLERLDTLLAGGAVDPQTVI 64

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            V+   D +   + LR +LTA +AR      +    P R Y    +FR +        +F
Sbjct: 65  QVW---DAEEGVLGLRPELTASIARASVTRMEGETHPQRLYYNDNIFRQQPGHASSQHEF 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +GSS   ADAE+ +++AD L  +G++  ++H+ +    +   +L         
Sbjct: 122 YQAGVELLGSSGLLADAEVLLLLADCLSELGVQ--NWHVLLGEADLTRSLLRPFP----- 174

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                               + V+  +                L+ E  +  +  L +  
Sbjct: 175 --------------------EAVRGSVRRAIAQLDRVGLADLPLSPELKEHALFLLDLRG 214

Query: 249 EKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           E + + +    +       +    L  + E++ K       + +  ++++  +YYTG V+
Sbjct: 215 EPAQVLQKVSQLPLEPPQHEAVTNLKSLVEVLSK----QPSLTLDLSLIQTFDYYTGIVF 270

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALKSL 365
           E I                 +G GGRYD L  +   + + +P  GFS  +  L   L  L
Sbjct: 271 EII--------SDVESGQRLLGQGGRYDTLLGLYHPQNEMLPGIGFSFNVEHLHQVLLPL 322

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                            +     +++    +   LR   
Sbjct: 323 GMLPKQTPASHW---LVVAETESAIAAAFDHAHQLRQQN 358


>gi|300865548|ref|ZP_07110329.1| ATP phosphoribosyltransferase regulatory subunit [Oscillatoria sp.
           PCC 6506]
 gi|300336454|emb|CBN55479.1| ATP phosphoribosyltransferase regulatory subunit [Oscillatoria sp.
           PCC 6506]
          Length = 419

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 86/436 (19%), Positives = 167/436 (38%), Gaps = 36/436 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    ++  +  I   ++ ++  +G+  I T  LE  D+L          
Sbjct: 1   MVHQPPSGARDLLPLDVAQKISIERRLQQVFHRWGYHRIITSTLERLDTLMAGGA---VQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFR--NEKHGPG 123
              V  LQD +   + LR +LTA +AR  A    D+  +P R Y    VFR      G G
Sbjct: 58  RSTVIQLQDAEDGELGLRPELTASIARAAATRMVDSAAWPQRLYYNANVFRKGRGFGGHG 117

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
             ++F Q  V+ +G+    AD E+ +++ + L+ +G+    +H+ +    +   +L+   
Sbjct: 118 SQQEFYQAGVELLGAGGVAADVEILLLLCECLQNLGLSG--WHLVLGEAGLTAKLLDPFP 175

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +   D++        AI  LD+  L+ +   L     + +           + + I+ + 
Sbjct: 176 VQVRDRVR------SAIANLDRIALETLP--LSPELRERAFLLFDLRGRPQDVLPIVANL 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                ++      + +   +   +    L      + +S   + +I +  ++++  +YYT
Sbjct: 228 DLDLSQREAVNNLKSLVDLLNECQSKTALA-----LGQSQEGAFQIHLDLSLIQTFDYYT 282

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVA 361
           G V+E +                 +G GGRYD L  +   +G + P  GFS  I  L   
Sbjct: 283 GIVFEIVSNTE--------GEQRVLGQGGRYDRLLGLYHPEGTSYPGIGFSFNIEDLHYI 334

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGN 419
           L +                  +     + +    Y Q LR +   +R E+ LG  +    
Sbjct: 335 LLNTGELPRETPGSDW---LVIPETPQAYAAAFSYAQKLRESAPLVRVEVDLGGRETAEE 391

Query: 420 QLKYADRRNCPLAIIQ 435
             +YA  R     +  
Sbjct: 392 VREYARNRRISQVVWI 407


>gi|28493752|ref|NP_787913.1| histidyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28572935|ref|NP_789715.1| histidyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|46396616|sp|Q83FF5|SYH_TROWT RecName: Full=Probable histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|46396618|sp|Q83H72|SYH_TROW8 RecName: Full=Probable histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|28411068|emb|CAD67453.1| histidyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28476794|gb|AAO44882.1| histidyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 426

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 106/370 (28%), Positives = 163/370 (44%), Gaps = 36/370 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++   PRG  D    E   R+RI + I   Y ++GF+PIETP LE  + L   +  E+  
Sbjct: 1   MKIVPPRGMQDFLPHEKEHRDRITEVIYKSYISHGFNPIETPSLENIERLACGVGQEN-- 58

Query: 67  NKGVFSLQDDD----------GQ--WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPV 114
            K  + +               +   + LR+DLT PL R+   N   +    R+ +IG V
Sbjct: 59  EKLTYKIIRRGLTGAQTVQHPDELIDLGLRFDLTIPLVRFWNTNRARLPKIFRSLQIGHV 118

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           +R EK   GR RQFIQCD+D +G     A+ E+ +    TLE +GI+    HI    R+I
Sbjct: 119 WRAEKPQKGRRRQFIQCDIDIIGQPEILAEIELLVATLSTLEQLGIRTPKLHIND--RRI 176

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L  +L  +G+         + V   +DKL K GL  VK  L E     +       N  +
Sbjct: 177 LFSMLNNLGVPHS----CHVYVSIVLDKLRKIGLDLVKQELCEFPALVAY-LASSVNSNT 231

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
              D+      +   K +  +   ++  +     F+   +   +   + +    +     
Sbjct: 232 GSTDLCFD---VSSTKDITHIRRTIQSALPHGCKFDCEDLCRIIASVNEFTQTGVFFDPL 288

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +VRG+ YYTG ++E +                 + GGGRYDGLV R  G   PA GFSIG
Sbjct: 289 LVRGMGYYTGPIFEILHDDYS------------IAGGGRYDGLVERLGGLPTPACGFSIG 336

Query: 355 ISRLIVALKS 364
             R++  +K 
Sbjct: 337 FERVLGLIKE 346


>gi|78044079|ref|YP_359929.1| putative ATP phosphoribosyltransferase, regulatory subunit
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|109892206|sp|Q3AD55|HISZ_CARHZ RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|77996194|gb|ABB15093.1| putative ATP phosphoribosyltransferase, regulatory subunit
           [Carboxydothermus hydrogenoformans Z-2901]
          Length = 324

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 66/302 (21%), Positives = 116/302 (38%), Gaps = 30/302 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ELP G  D    E  +R  + +    +    GF  + TP  EY ++L +   + D     
Sbjct: 7   ELPMGVRDYLPGEAALRRYLENLFVELVAKEGFQEVITPSFEYYETL-RESSETDLI--- 62

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
                D  G+ ++LR D+T P+AR V+        P + +    VF     G  + R+F 
Sbjct: 63  --KFVDRTGELLALRGDMTTPIARVVSTKMKHRELPLKIFYAATVFSGNFSGRNKLREFK 120

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++  G      ++++  +MA  L     K  +  I + +  IL G++E+  L     
Sbjct: 121 QLGIEVFGDITSKLESDLIKLMAVYLRK--AKVKNLEISLGHVDILTGLIEEYEL----- 173

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +K  L +          + A  +    + +V FL     
Sbjct: 174 ---------------FNHFSEIKNALNQKDYVALEGIFERAGKSQRVRESLVDFLQQRGG 218

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K++    + +      +K   EL  ++E +   G    ++  S  +VR L YYTG V+EA
Sbjct: 219 KAILRKAKKMLSHPKAKKALEELEEVTEYLISEGVRELKLDFS--LVRDLNYYTGLVFEA 276

Query: 310 IL 311
             
Sbjct: 277 YT 278


>gi|294930641|ref|XP_002779631.1| Histidyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239889039|gb|EER11426.1| Histidyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 375

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 21/229 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D   +++R+RN +    R++   YGF   + P+LE  D   +   +E   
Sbjct: 50  ISFDPPSGTRDFFPEDMRVRNWLFAQWRSVSTQYGFSEYDAPVLENEDLYKRKAGEEIV- 108

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAEN---------------FDTIVFPCRTYRI 111
            + +++  D +   ++LR ++T  LAR V                      V P + + I
Sbjct: 109 -EQMYNFVDKEDHRVTLRPEMTPTLARMVLSRVRMSAEGGSSHNAAAQMAEVLPLKWFSI 167

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
              +R E    GR R+  Q + D VG S  TA+ E+   M    + VG+   D  I +N+
Sbjct: 168 PQCWRFETTQRGRKREHYQWNCDIVGVSDITAELELLATMVGFFKRVGLTSADVGIKVNS 227

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
           R IL  +L+  G+  D+       V   +DK+DK G + V   + E   
Sbjct: 228 RAILQSVLKASGVGADE----FAKVCVVVDKIDKVGREEVIRQMVEDIK 272



 Score = 83.0 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 5/116 (4%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E     + E   + +           +       LR+ G   ++ L + K    Q +YA
Sbjct: 260 REEVIRQMVEDIKLDVAVAAAYKGMYGQALEVAAGLRSGGATVDVMLEAGKRVDKQFRYA 319

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGK-----ELSREIKNNESWREARVAQIT 475
           DR            E   G ++IKDL  G      ++   + +  + +     Q  
Sbjct: 320 DRVGADKIAFVAPSEWESGKVRIKDLRTGDSEARVQIDIPVCDLANAKSYFDKQAE 375


>gi|254994366|ref|ZP_05276556.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 277

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 14/264 (5%)

Query: 210 GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGF 269
             +  L      +  +F     +   +  + +     D +  + +    +   +  E+  
Sbjct: 27  KHREALVAHFEPHIDEFCAECQVRLHKNPLRILDCKKDHDNPLIQSAPSILDFL-NEESV 85

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
                + + +          +I ST+VRGL+YY    +E +        K       ++ 
Sbjct: 86  AYFENVKKYLNA---LEIPFEIDSTMVRGLDYYNHTTFEIMSVEEGFGAK------TTLC 136

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
           GGGRY GLV  F G + P  GF IG+ R+++AL+  +     I    P+ +  +    ++
Sbjct: 137 GGGRYHGLVREFGGPDTPGMGFGIGVERILLALEKADI---KIPAKKPLEVYVITAQPEA 193

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
             K       LR  GI AE      + F  QLK A+R+N    II G  E   G  Q+K+
Sbjct: 194 ELKAVTLVNKLRQNGISAEKDY-LKRKFKAQLKDANRKNAVYTIILGEEELQTGNYQLKN 252

Query: 450 LAKGKELSREIKNNESWREARVAQ 473
           +  G++ +               +
Sbjct: 253 METGEQEAVSETTILEKLINTKGE 276


>gi|188997407|ref|YP_001931658.1| Histidine--tRNA ligase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932474|gb|ACD67104.1| Histidine--tRNA ligase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 415

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 103/455 (22%), Positives = 180/455 (39%), Gaps = 46/455 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ +LP+G      KE  I + I  +I + ++ +G++ +  PLLEY D+    L +E   
Sbjct: 1   MKIDLPKGVRTFNPKESFILSWIEKNIEDNFKLWGYEKVILPLLEYYDAHKNVLNEEIL- 59

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            K  F L D  +G+ + LR D T  +ARY+A       FP R Y  G VFR         
Sbjct: 60  -KNTFRLVDRYEGETLILRPDFTVQIARYIAS-LQEKEFPIRLYYTGDVFRYVVPKGDNL 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  V+ +G     ADAE+  +   +L+ +     ++ I +NN KI   I + +   
Sbjct: 118 YEKKQIGVELIGVDKIEADAEIIAIAISSLKKL--SIENFQIDVNNVKIFKAITKIL--- 172

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                            L +   + + L L      N   F K  ++ ++    +++   
Sbjct: 173 ----------------NLSQNQTKELFLCLKNREIYNIQAFLKDFDVNNKIKGFILNLPK 216

Query: 246 IDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           ++++   + EL E  +          EL+VI E++++       I       R   YYTG
Sbjct: 217 LNIKADKLKELAEEYEDIEDISNALKELIVIYEILKEY-QLDEYIVFDLCEPREFSYYTG 275

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E  +                +G GGRYD L+S + G +      + G +  ++A+  
Sbjct: 276 IVFEIFIKDFPK----------IIGYGGRYDNLLSNYNGSHP-----ATGFAFDLLAIYD 320

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             + T  IK      I     D           + LRT G      +   ++    + +A
Sbjct: 321 YITKTTEIKNEKDFYIIDTTEDKKL---AYNIAKNLRTKGYTVARDII-KRDIDLSIDFA 376

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            R      I+       + +  +KD  K +E S E
Sbjct: 377 FRNGYKNVILITVENSEKKVYILKDKNKKEEASLE 411


>gi|167634361|ref|ZP_02392682.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0442]
 gi|254740459|ref|ZP_05198150.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           anthracis str. Kruger B]
 gi|167530249|gb|EDR92975.1| ATP phosphoribosyltransferase, regulatory subunit [Bacillus
           anthracis str. A0442]
          Length = 420

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 170/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGKRDYLFEECTLIEEVEQKLRRTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR V         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVVGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LAGKYNEIVQSGIEVIGIDNVRAEIECVISVIQSLQKLRVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEKF-----------LRTYIESKNYASLSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    +L+  G +  + L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLLQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|315644473|ref|ZP_07897605.1| ATP phosphoribosyltransferase regulatory subunit [Paenibacillus
           vortex V453]
 gi|315279980|gb|EFU43277.1| ATP phosphoribosyltransferase regulatory subunit [Paenibacillus
           vortex V453]
          Length = 397

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 90/407 (22%), Positives = 154/407 (37%), Gaps = 45/407 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D     +    RI   +    + +G+  I TP +EY D++G   
Sbjct: 1   MSKPKGF--EKPAGVRDYLPHAVTKLRRIEREVLACMDRWGYRQIMTPTMEYYDTVGVAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   + +F L +  G  + LR DLTAP+AR ++        P R      VFR  + 
Sbjct: 59  STSD---QKLFKLLNKRGTTMVLRSDLTAPIARVMSSLLKDEPLPVRLSYHANVFRAIEE 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ VG  +  ADAE+  +  ++L+A G+    + I + +   L+G+L 
Sbjct: 116 EAGREAEFFQTGVELVGDDSPEADAEVIALAIESLKAAGV--ERFKIAMGHMGYLNGLL- 172

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                      ++++  RA D+      + +K  L         +      L   Q + +
Sbjct: 173 -----------QQVLPERAEDQ------ESLKQDLLNRDYVGYRNTITSLQLAPGQQEQL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L +   + +      +            L  + E++      S  +    T++    
Sbjct: 216 EGILRLRGGREIAGQALEISSNDLARASIEHLCKVWEVLEAYDV-SRHVLFDLTMLGDFS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  +E                   V  GGRYD L+ +F  + VPATGF+I  +R++ 
Sbjct: 275 YYTGMTFEGYAAELG----------SPVASGGRYDKLLQQFG-RAVPATGFAIKTNRILD 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            ++  E   +            + + +    K       LR  G   
Sbjct: 324 GVQGSEIVEDLP--------VLIRYTASYRKKGLAKAADLRAQGHTV 362


>gi|319789161|ref|YP_004150794.1| histidyl-tRNA synthetase 2 [Thermovibrio ammonificans HB-1]
 gi|317113663|gb|ADU96153.1| histidyl-tRNA synthetase 2 [Thermovibrio ammonificans HB-1]
          Length = 419

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 81/434 (18%), Positives = 159/434 (36%), Gaps = 56/434 (12%)

Query: 7   LRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           ++  E+P+GF     +E   R +I++  + + +++G++P+  P +E+ ++     P  + 
Sbjct: 1   MKLTEIPKGFKTLLPEEAARREQIVEKAKRVLKSWGYEPLVLPTVEFLETFKAVEPTLEE 60

Query: 66  PNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            +   F L D   G+ +++R D T  +AR VA +F     P R +  G VFR        
Sbjct: 61  LS---FKLVDRFTGRLMAVRPDFTPQVARVVASSFKDDEPPFRFFYQGKVFR----DKDG 113

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+  Q   + +G     ADAE+  ++ + L+ +G++                       
Sbjct: 114 DREVGQLGFELIGVPEVEADAEVVAVVVNVLKELGLRSFQI------------------- 154

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             D      L        L+      V  +L     D S        L   +   +++ L
Sbjct: 155 --DVGHASFLEGALEELGLEGEERDEVLEILS--HKDYSRLLLFSERLEDGKRSKLLALL 210

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +   + + E    +       +   EL    +++   G+  N I   S   +G+EY+TG
Sbjct: 211 ELYGGEEVLERALKLFKNEKSTRAVEELQQAYKILTSYGFAENVIFDLSEK-KGMEYHTG 269

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             YE +           P+    +G GGRYD L+ +F  + + ATG ++    L   L+ 
Sbjct: 270 ITYEVL----------HPLYGFPLGRGGRYDTLLKKFG-RPLSATGMALNTDALHELLEK 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL---GSSKNFGNQL 421
                   ++   ++          L       + LR  G      +      ++     
Sbjct: 319 KGLFKEEAEKEFYLIDL-----KKELHLAYHLARELRKRGYTVTRDIVKRDYKRSVEVAF 373

Query: 422 KYADRRNCPLAIIQ 435
           K          ++ 
Sbjct: 374 KK----GYRFVVVL 383


>gi|228932788|ref|ZP_04095658.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228826838|gb|EEM72602.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 420

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 169/433 (39%), Gaps = 45/433 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +     P G  D   +E  +   +   +R  +   G++ I TP +E+ D      
Sbjct: 1   MTKWKRAN---PNGTRDYLFEECTLIEEVEQKLRCTFLERGYEEIRTPTIEFYDVFA--F 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + ++   D+ G+ I LR D+T PLAR V         P +    G VFR  + 
Sbjct: 56  QSRPIDEEKMYKFFDEKGRIIVLRPDMTIPLARVVGT--QRCDTPLKVTYSGNVFRANES 113

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G++ + +Q  ++ +G     A+ E  + +  +L+ + ++   + I I   ++   I++
Sbjct: 114 LAGKYNEIVQSGIEVIGIDNVRAEIECVISVIQSLQKLKVQS--FTIEIGQVQLYKCIVK 171

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ +H +++             L  +        L     D   D         E + ++
Sbjct: 172 KLSIHEEEEK-----------VLRTYIESKNYASLSNFIRDKKLDRC------DETVKLL 214

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +     + E  E +  +   +     +  I E + K GY S  I I   +++ L+
Sbjct: 215 EKLPRLFGNLEVIEEAEKLASSNEMKMAITRVKEIYEAIEKLGYGS-YISIDLGMIQHLD 273

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++  +                +  GGRYD L+  F    +PA G ++ +++++ 
Sbjct: 274 YYTGVIFKGYIYEIG----------EEIVSGGRYDELIGNFGEM-LPAVGLAVQVNQIVK 322

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL+  +      +    +       + + L++ +    + +  G +  + L S  N  + 
Sbjct: 323 ALQEQQEPYERKRIDIMIHY-----ELNRLAEAERLRNLFQKDGKKVALSLFS--NLNDT 375

Query: 421 LKYADRRNCPLAI 433
            ++A +      +
Sbjct: 376 FQFARKNQIVTVV 388


>gi|291568129|dbj|BAI90401.1| ATP phosphoribosyltransferase regulatory subunit [Arthrospira
           platensis NIES-39]
          Length = 411

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 81/447 (18%), Positives = 161/447 (36%), Gaps = 43/447 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    ++  +  I   ++ ++  +G+  I T  LE  D+L          
Sbjct: 1   MIHQPPPGARDLLPLDVAQKIWIERRLQQVFHRWGYHRIITSTLERLDTLMAGGA---VQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFR-NEKHGPGR 124
              V  LQD + + + LR +LTA +AR           +P R Y    +FR   + G G 
Sbjct: 58  RSTVIQLQDAENEGLGLRPELTASIARAAVSRMAGNDHWPQRLYYNANIFRKGGETGHGT 117

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             +F Q  V+ +G+    AD E+ +++ D L ++ ++   + +G     +   +L     
Sbjct: 118 QLEFYQAGVELLGADGVRADWEVLLLLWDCLRSLNLQNPQFILGEA--GLTRSLLSPFPP 175

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D++ + +  L  I          ++          +           + +  +    
Sbjct: 176 PLRDQVRQAIANLDRITLETLSMSPELRQ--------RALFLFDLRGRPEDVLAKVSQLD 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D ++S     + +   +             +  R        I +  ++++  +YYTG
Sbjct: 228 LDDSQRSALNNLKSLIDGL----------NQYQKWRPDTLYPMSITLDLSLIQTFDYYTG 277

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVAL 362
            V+  +                 +G GGRYD L  +   +G+  P+ GFS+ I  L   L
Sbjct: 278 IVFIVV--------SDSHSGSRVLGRGGRYDQLLGLYHPQGETKPSIGFSLTIEELHQVL 329

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQL 421
             +    ++I          +     +      Y Q LR     + +M L  S +     
Sbjct: 330 LDMGELPSDIPSGDC---LVVPKTPQAEVAAFAYAQDLRQSQDAQVQMELSISDDLLALR 386

Query: 422 KYADRRNC-PLAIIQGTGERSRGMLQI 447
           + A RR    +A +    E+    L++
Sbjct: 387 ESARRRGITQIAWV---DEQGNPTLEV 410


>gi|293401204|ref|ZP_06645348.1| ATP phosphoribosyltransferase, regulatory subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305330|gb|EFE46575.1| ATP phosphoribosyltransferase, regulatory subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 376

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 72/407 (17%), Positives = 156/407 (38%), Gaps = 45/407 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +  +P G  D    E  ++  +   I  ++++YG+  I TP +E+  +    +  ++  +
Sbjct: 3   KFAIPEGTRDLILGECSVKKALQKEIEAVFDSYGYKEIITPSIEFYQTYQ--VGFDNVKD 60

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++   D +G+ ++LR D+T P+ R     F     P R      V++ ++   G+  +
Sbjct: 61  ESMYKFFDHNGRILTLRMDMTVPIVRVATTRFKDQKPPFRFQYCANVYKVKESFAGKRNE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
              C ++ +G SAE +D E+ +   + +E +  K++ Y + + N          + L  +
Sbjct: 121 VTDCGIELLGQSAEESDLEILVCACEVMEKL--KQDAYTLELGNINFFHSACSDLHLDEE 178

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D                   ++ +  L+          F +   L+ E     +    + 
Sbjct: 179 D-------------------IKTLADLIDRKSMSELSSFLESLALSEEVQTFFLQLPWLC 219

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +  + +                 L  + + +++ GY    I      V  L YY+G ++
Sbjct: 220 GDVEVLKEALPYCFHPKLRAIIAGLKELYDQLKELGY-EKHITFDLGKVPHLNYYSGLLF 278

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E  +            +  SV  GGRYD L  +F    +PA GFS+ +  ++  L+ + +
Sbjct: 279 EGFVE----------GIGTSVLSGGRYDTLAEKFG-SPMPAIGFSVKLDYVLPVLEKVAT 327

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              +++   P+             K     + LR   I  E+    +
Sbjct: 328 KQPSVRLCYPMKAKV---------KALQKAKELRKDHI-VELLQDEA 364


>gi|308066991|ref|YP_003868596.1| ATP phosphoribosyltransferase regulatory subunit [Paenibacillus
           polymyxa E681]
 gi|305856270|gb|ADM68058.1| ATP phosphoribosyltransferase regulatory subunit [Paenibacillus
           polymyxa E681]
          Length = 401

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 83/341 (24%), Positives = 133/341 (39%), Gaps = 36/341 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E+P G  D   + +     I  ++    E +G+  I TP +EY D++G   
Sbjct: 1   MSKPKGF--EIPVGVRDYLPRAVSKLRAIELNVLECMERWGYRQIMTPTMEYYDTVGVAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              DR    +F L ++ G  + LR D+TAP+AR V+        P R      VFR  + 
Sbjct: 59  STSDRK---LFKLLNNRGTTLVLRSDMTAPIARVVSSLLKEEEVPLRLSYHANVFRAIEE 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ VG  +  ADAE+  +   +L+A G+    + I + +   L+G+ E
Sbjct: 116 EAGREAEFFQTGVELVGDDSPEADAEVVALAIASLQAAGVTS--FKIAMGHVGFLNGLFE 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +I      K                   Q +K LL            +   L  E  D +
Sbjct: 174 EIIPGRQAKQ------------------QALKELLLSRDVVGYRTAIEALGLAPEHRDKL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            + L +   K + +    +       +    L  + E++   G  S  + I  T++    
Sbjct: 216 EAILRLRGGKEICDQATRLSVEQQTIRSIAHLCEVWEVLEAYGV-SEHVLIDLTMIGDFS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
           YYTG  +E                   V  GGRYD L+ +F
Sbjct: 275 YYTGMTFEGYAAEIGF----------PVCNGGRYDNLLQQF 305


>gi|307150960|ref|YP_003886344.1| histidyl-tRNA synthetase 2 [Cyanothece sp. PCC 7822]
 gi|306981188|gb|ADN13069.1| histidyl-tRNA synthetase 2 [Cyanothece sp. PCC 7822]
          Length = 404

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 86/436 (19%), Positives = 161/436 (36%), Gaps = 44/436 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I D ++ +++ +G+  I T  +E+ D+L          
Sbjct: 1   MIHQAPAGARDLLPLEVAQKCWINDRLQEVFQRWGYQRIVTSTIEWLDTLMAGGA---IE 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-PGRF 125
              V  LQD     + LR +LTA +AR      +T  +P R      VFRN   G  GR 
Sbjct: 58  RSTVIHLQDTSEGALGLRPELTASIARTAVTRMETSTYPQRICYRANVFRNPPAGYHGRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  V+ + +    ADAE+ +++AD L+ +G+   D+H+ +    +   +L      
Sbjct: 118 LEFYQAGVELLFAGGLLADAEILLLVADCLKILGLT--DWHLVLGQASLTQSLLSPFPEP 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +                     V+  L              +    E+  ++     
Sbjct: 176 LRQQ---------------------VRGCLANLDYVTLESLFYPSAALKERALLLFDLRG 214

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             L+  +      +    +     N+L  + EL+     N   + +  ++V+  +YYTG 
Sbjct: 215 NPLD--VLSKVAHLDLHDSDRAIINDLKSLLELLS---PNPLPLILDLSLVQTFDYYTGV 269

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V++ +                 +G GGRYD L+  +  Q + A G    ++   + L  L
Sbjct: 270 VFQVV--------SSTDHQLRVLGQGGRYDQLLGLYHPQKLSAPGIGFSLNLDDLHLCLL 321

Query: 366 ESSTNNIKEMGP-VLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGNQLK 422
            +  + I    P +    +     + +    Y Q LR +   +R  + LG  +N     +
Sbjct: 322 SAKDSAIPRQTPAIDYLIIAQTPQAQAAVFSYAQQLRNSDTLVRVALDLG-GRNPEEIRE 380

Query: 423 YADRRNCPLAIIQGTG 438
           YA              
Sbjct: 381 YARSCRIQHLAWITED 396


>gi|284051955|ref|ZP_06382165.1| ATP phosphoribosyltransferase regulatory subunit [Arthrospira
           platensis str. Paraca]
          Length = 411

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 81/447 (18%), Positives = 161/447 (36%), Gaps = 43/447 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    ++  +  I   ++ ++  +G+  I T  LE  D+L          
Sbjct: 1   MIHQPPPGARDLLPLDVAQKIWIERRLQQVFHRWGYHRIITSTLERLDTLMAGGA---VQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFR-NEKHGPGR 124
              V  LQD + + + LR +LTA +AR           +P R Y    +FR   + G G 
Sbjct: 58  RSTVIQLQDAENEGLGLRPELTASIARAAVSRMAGNDHWPQRLYYNANIFRKGGETGHGT 117

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             +F Q  V+ +G+    AD E+ +++ D L ++ ++   + +G     +   +L     
Sbjct: 118 QLEFYQAGVELLGADGVRADWEVLLLLWDCLRSLNLQNPQFILGEA--GLTRSLLSPFAP 175

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D++ + +  L  I          ++          +           + +  +    
Sbjct: 176 PLRDQVRQAIANLDRITLETLSMSPELRQ--------RALFLFDLRGRPEDVLAKVSQLD 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D ++S     + +   +             +  R        I +  ++++  +YYTG
Sbjct: 228 LDDSQRSALNNLKSLIDGL----------NQYQKWRPDTLYPMSITLDLSLIQTFDYYTG 277

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVAL 362
            V+  +                 +G GGRYD L  +   +G+  P+ GFS+ I  L   L
Sbjct: 278 IVFIVV--------SDSHSGSRVLGRGGRYDQLLGLYHPQGETKPSIGFSLTIEELHQVL 329

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQL 421
             +    ++I          +     +      Y Q LR     + +M L  S +     
Sbjct: 330 LDMGELPSDIPSGDC---LVVPKTPQAEVAAFAYAQDLRQSQDAQVQMELSISDDLLALR 386

Query: 422 KYADRRNC-PLAIIQGTGERSRGMLQI 447
           + A RR    +A +    E+    L++
Sbjct: 387 ESARRRGITQIAWV---DEQGNPTLEV 410


>gi|170077245|ref|YP_001733883.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           PCC 7002]
 gi|229464987|sp|B1XPZ9|HISZ_SYNP2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|169884914|gb|ACA98627.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           PCC 7002]
          Length = 404

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 88/434 (20%), Positives = 166/434 (38%), Gaps = 47/434 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I D+++ +++ +G+  I T  LE+ ++L          
Sbjct: 1   MIHQPPAGARDLLPLEVAQKAWINDNLQRVFQQWGYQRIVTSTLEWLETLTAGGA---VD 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG-RF 125
              V  LQ  + Q + LR +LTA +AR          FP R      VFR+   G   + 
Sbjct: 58  RTKVIQLQTAESQALGLRPELTASIARAAVTRMAENTFPQRLCYRANVFRHPPRGSHGKQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  V+ + ++   ADAE+ +++AD+L+A+G++     +G                 
Sbjct: 118 MEFYQAGVELLFAAGIVADAEILLLLADSLDALGLEDWQLILGEAALGR----------- 166

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                         +D   +   + V+  +         +     +L +  +DI   F  
Sbjct: 167 ------------SLLDPFPEPVRETVRHCVANLDRVGLQELPLDEDLKAYALDI---FDL 211

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               +++             ++    L  +  L+  S      I +  T+++  +YYTG 
Sbjct: 212 RGEPETILARVSQFDLGPEAQEIVANLKALFALLAGSTQKQLPIILDLTLIQTFDYYTGI 271

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
           V+E +      +          +G GGRYD L  +   + +N P  GF + I  L   L 
Sbjct: 272 VFEVVNFANHQSY--------ILGQGGRYDQLLGLYHPQRENHPGIGFCLNIEELHTCLL 323

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGNQL 421
           +   S    K++       +  + ++  +   Y Q LR     +R E+ LG  ++     
Sbjct: 324 T---SPQLPKQLAGSAWLVIATEPNAQQQVFHYAQTLRQGDEMVRVEVELG-GRSPAEIY 379

Query: 422 KYADRRNCPL-AII 434
            YA   +    A I
Sbjct: 380 AYARSSHITHLAWI 393


>gi|29169333|gb|AAO65984.1| histidyl-tRNA synthetase [Photobacterium phosphoreum]
          Length = 102

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 5/104 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      +  RG +D   ++  I   +   I+ +  +YG+  I  P++E      + +
Sbjct: 1   MKKN----IQSIRGVSDILPEQTPIWLWLESIIKQVTHSYGYQQIRLPIIEPLALFERAV 56

Query: 61  PD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV 103
            +  D  +K +++  D  G+ I+LR + T+  AR V E+     
Sbjct: 57  GESTDIVSKEMYNFVDKSGEHITLRPEGTSSCARAVIEHNMCYN 100


>gi|332706269|ref|ZP_08426337.1| ATP phosphoribosyltransferase, regulatory subunit [Lyngbya
           majuscula 3L]
 gi|332354974|gb|EGJ34446.1| ATP phosphoribosyltransferase, regulatory subunit [Lyngbya
           majuscula 3L]
          Length = 414

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 90/438 (20%), Positives = 162/438 (36%), Gaps = 54/438 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I + ++ ++  + +  I T  LE+ D+L          
Sbjct: 1   MIHQPPPGARDLLPLEVTQKRWIANHLQQVFHRWSYHRIITSTLEWLDTLMAGGA---VE 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF------PCRTYRIGPVFRNEKH 120
              V  L D +   + LR +LTA +AR +               P R Y    VFR    
Sbjct: 58  RSTVIQLHDAEEGTLGLRPELTASIARAMVTRIAGSNSEACLSLPQRLYYNANVFRRPTI 117

Query: 121 GPG-RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
           G   R  +F Q  V+ +G     AD E+ +++AD L  +G++   +H+ +   ++   +L
Sbjct: 118 GNHGRQLEFYQSGVELLGVGGLLADGEILLLLADCLNNLGLQ--QWHLILGEARLTRSLL 175

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                   DK+ + +  L  +          ++                  +L  +  D+
Sbjct: 176 SPFPKPMQDKVRQAIAYLDRVSLETLPLSPELRER-----------ALFLFDLRGDPADV 224

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +    S+DL+ S HE+   +K                EL+  S  +   I +  T+V+  
Sbjct: 225 LQKVASLDLDSSEHEIVSNLKSL-------------VELLNSSSASPLPIVLDLTLVQTF 271

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG--LVSRFKGQNVPATGFSIGISR 357
           +YYTG V+                    +G GGRYD    +   +G+  P  GF + +  
Sbjct: 272 DYYTGIVF--------EVVSSSEGSSRVLGQGGRYDQLLSLYHPQGETYPGIGFCLNLED 323

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSK 415
           L   L S     +            +    ++ +    Y Q LR +   +R EM LG  +
Sbjct: 324 LHYVLLSSNQLPSRTPASDW---LVVPEFPEAEAVAFTYAQKLRDSEHLVRVEMDLG-GR 379

Query: 416 NFGNQLK-YADRRNCPLA 432
           +   Q++ YA        
Sbjct: 380 SP-AQIRAYALGHGITYI 396


>gi|229828384|ref|ZP_04454453.1| hypothetical protein GCWU000342_00445 [Shuttleworthia satelles DSM
           14600]
 gi|229792978|gb|EEP29092.1| hypothetical protein GCWU000342_00445 [Shuttleworthia satelles DSM
           14600]
          Length = 426

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 113/408 (27%), Positives = 172/408 (42%), Gaps = 41/408 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G  D   +E  IR+ +   I+  Y ++GF PIETP +E   +L      E+   K 
Sbjct: 6   KPVNGMKDILPREEEIRDYVTGIIKETYRSFGFTPIETPCMENIANLSNKQGGEN--EKL 63

Query: 70  VFSLQDDDGQ-------------WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           +F +     +                +RYDLT PL+R+ A + + +  P +  +IG V+R
Sbjct: 64  IFKVLKRGEKLHLDTAQTEEDIVDYGMRYDLTVPLSRFYANHANDLPKPFKALQIGNVWR 123

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            E    GRFRQF QCD+D +G  +  A+ E+ +     +  +G K  ++ I IN R+IL 
Sbjct: 124 AEHTQRGRFRQFTQCDIDILGEPSNLAEIELILATTTCIGRIGFK--NFEIRINERRILK 181

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
            +    G    D       +   +DK+DK GL GV   L E   D   D       +   
Sbjct: 182 AMASYAGFPESD----YDEIFITLDKMDKIGLDGVAEKLKEDYNDAVVDKYLELFESLSD 237

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              +V  +         +      G+   E+    L  I+  V ++      +    T+V
Sbjct: 238 KKDLVDGV---------DYLLAALGSFLDEEVARSLKEIATAVNEAKEADFTLVFDPTLV 288

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RG+ YYTG ++E             P   GS GGGGRYD +V  F GQ+ PA GFSIG  
Sbjct: 289 RGMSYYTGTIFEI----------AIPEFGGSCGGGGRYDKMVGGFTGQDTPACGFSIGFE 338

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           R+I+ L   +            L+         +S      +  R AG
Sbjct: 339 RIIMLLLESDFQVPGGGRKVAYLVEKKYPVQKLVS-VIKQAREAREAG 385


>gi|207109074|ref|ZP_03243236.1| histidyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 190

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/179 (34%), Positives = 108/179 (60%), Gaps = 4/179 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  GF D   K+   + ++L  +  +++++GF PIETP LEY+++L      +   
Sbjct: 2   ITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAEALLPDASSD--I 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K ++  +D   + ++LR+DLT PLAR+V+ +   +  P + Y IG VFR E+   GR+R
Sbjct: 60  QKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           +F QCD D +GS +   DAE+  ++  +L+A+ +   D+ + IN+RKIL+GI E  G+ 
Sbjct: 120 EFTQCDFDFIGSESLVCDAEIIQVIVASLKALDL--EDFCVSINHRKILNGICEYFGIS 176


>gi|321313044|ref|YP_004205331.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus subtilis
           BSn5]
 gi|291486041|dbj|BAI87116.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus subtilis
           subsp. natto BEST195]
 gi|320019318|gb|ADV94304.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus subtilis
           BSn5]
          Length = 391

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 84/401 (20%), Positives = 152/401 (37%), Gaps = 45/401 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D        + ++  S+ ++ + +G+  +ETP LE+ D+            +
Sbjct: 4   FEKPHGMRDTLPGLYETKKKVRRSLTDLIDKWGYQFMETPTLEFYDT---VGVQSAIEEQ 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D DG+ + LR D+T P+AR  A        P R      VFR ++   GR  +F
Sbjct: 61  QLFKLLDQDGKTLVLRPDMTGPIARVAASKLLKHGHPLRVGYAANVFRAQEREGGRPAEF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G    +ADAE+  ++   L+  G+    + I I +  I D +  ++  + + 
Sbjct: 121 EQVGVELIGDGTTSADAEVIALVVGALKNAGLAS--FKIAIGHAGIADALFVEVLGNVER 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                                 ++  L E       +  K   L+S     ++  L +  
Sbjct: 179 A-------------------DVLRRFLYEKNYVGYREHVKSLPLSSIDKSRLLELLELRG 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +    E +  +  G+   +EL  + +++   G   N +++   +V  + YYTG ++E
Sbjct: 220 GIEVCGRAEEIVDSAQGKSVVDELKALWDILEDYGCTEN-VRLDLNMVSHMSYYTGILFE 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                            G V G G     +        PATGF + I RLI AL      
Sbjct: 279 VYAE-----------NVGFVIGSGGRYNKLLGHFDSPAPATGFGLRIDRLIEAL------ 321

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                +  P  I  +    +  ++   Y    R  G +  +
Sbjct: 322 ---HMKEEPCDIDAVIFSKEQRAQAIAYANEERMKGNKVVL 359


>gi|16080546|ref|NP_391373.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221311443|ref|ZP_03593290.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221315770|ref|ZP_03597575.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus subtilis
           subsp. subtilis str. NCIB 3610]
 gi|221320685|ref|ZP_03601979.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus subtilis
           subsp. subtilis str. JH642]
 gi|221324970|ref|ZP_03606264.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus subtilis
           subsp. subtilis str. SMY]
 gi|7674068|sp|O34459|HISZ_BACSU RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|2618864|gb|AAC67293.1| histidyl-tRNA synthetase [Bacillus subtilis]
 gi|2636006|emb|CAB15498.1| histidyl-tRNA synthetase component of ATP phophoribosyltransferase
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 391

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 84/401 (20%), Positives = 152/401 (37%), Gaps = 45/401 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D        + ++  S+ ++ + +G+  +ETP LE+ D+            +
Sbjct: 4   FEKPHGMRDTLPGLYETKKKVRRSLTDLIDKWGYQFMETPTLEFYDT---VGVQSAIEEQ 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D DG+ + LR D+T P+AR  A        P R      VFR ++   GR  +F
Sbjct: 61  QLFKLLDQDGKTLVLRPDMTGPIARVAASKLLKHGHPLRVGYAANVFRAQEREGGRPAEF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G    +ADAE+  ++   L+  G+    + I I +  I D +  ++  + + 
Sbjct: 121 EQVGVELIGDGTTSADAEVIALVVGALKNAGLAS--FKIAIGHAGIADALFVEVLGNVER 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                                 ++  L E       +  K   L+S     ++  L +  
Sbjct: 179 A-------------------DVLRRFLYEKNYVGYREHVKSLPLSSIDKSRLLELLELRG 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +    E +  +  G+   +EL  + +++   G   N +++   +V  + YYTG ++E
Sbjct: 220 GIEVCGRAEEIVDSAQGKSVVDELKALWDILEDYGCTEN-VRLDLNMVSHMSYYTGILFE 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                            G V G G     +        PATGF + I RLI AL      
Sbjct: 279 VYAE-----------NVGFVIGSGGRYNKLLGHFDSPAPATGFGLRIDRLIEAL------ 321

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                +  P  I  +    +  ++   Y    R  G +  +
Sbjct: 322 ---HMKDEPCEIDAVIFSKEQRAQAIAYANEERMKGNKVVL 359


>gi|148379531|ref|YP_001254072.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Clostridium botulinum A str. ATCC 3502]
 gi|153933119|ref|YP_001383908.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|153935651|ref|YP_001387456.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           botulinum A str. Hall]
 gi|148289015|emb|CAL83104.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Clostridium botulinum A str. ATCC 3502]
 gi|152929163|gb|ABS34663.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|152931565|gb|ABS37064.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium
           botulinum A str. Hall]
          Length = 411

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 83/439 (18%), Positives = 173/439 (39%), Gaps = 46/439 (10%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
             D   +E  I+  I D +R IY+  GF  I +P +E+ D     +  +  P + ++ L 
Sbjct: 1   MKDILFEESNIKLNIEDQLRKIYKYSGFSEIISPTIEFYDVFNSNI--QAIPQEKMYKLF 58

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
           D+ G+ + LR D+T P+ R          +P +      +FR  +   G+  +  Q  ++
Sbjct: 59  DNLGRILVLRPDMTTPIGRITGTKMKDCTYPLKLCYTANIFRVNEKLNGKRGEIAQSGIE 118

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +G++   +D +  +   + L ++G+K     +G        G  + +  + + K     
Sbjct: 119 IIGTNGIKSDVDSIVTAINALLSLGLKNFKIELGEA------GFFQALTENMEIKEENLK 172

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
            +   I   +   L+     +                 + E  +++ +   +  +  + E
Sbjct: 173 KLKEIIRNKNYVALKKFLDEISSKY-------------SKEDFELIKNLPKLFGDIKIIE 219

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             + +       K  +++  I + +   G     I I   +V+ ++YYTG +++  +   
Sbjct: 220 KAKALTKNKKALKSLDDIYNIYKSIENIG-LEAYISIDLGMVQNIDYYTGVIFKGYVEEV 278

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
                       S+  GGRYD L+  F    +PATGF+I +  +++ALK   + + +  +
Sbjct: 279 G----------DSILSGGRYDNLIQHFGI-ELPATGFAINVDDIMIALKKQNTISMDKDK 327

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI- 433
                   + +  + L K   + Q L+   I  E+ L  +      L Y+ ++     I 
Sbjct: 328 K-----VLIFYKEEFLRKAYDFMQELKMKKIICELSLLDND--KENLLYSKKKGIDFIIG 380

Query: 434 IQGTGERSRGMLQIKDLAK 452
             G        L +KDL  
Sbjct: 381 FMGEE-----KLFVKDLKS 394


>gi|221111583|ref|XP_002162116.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 181

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 3/105 (2%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K K   + P+G  D   K + IR  + D I  +++ +G   I+TP+ E  ++L     ++
Sbjct: 58  KQKFVLKNPKGTRDYGPKSMAIRENVFDVIIKVFQKHGAVQIDTPVFELKETLTGKYGED 117

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
              +K ++ L+D  G+ ++LRYDLT P AR+VA N    +     
Sbjct: 118 ---SKLIYDLKDQGGELLALRYDLTVPFARFVAMNKIDKIKRYHI 159


>gi|195172035|ref|XP_002026807.1| GL26979 [Drosophila persimilis]
 gi|194111746|gb|EDW33789.1| GL26979 [Drosophila persimilis]
          Length = 211

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K   + P+G  D   +++ +R  +LD I  +++ +G + I+TP+ E  + L     ++ 
Sbjct: 55  QKFTLKTPKGTRDYAPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGED- 113

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             +K ++ L+D  G+ +S+RYDLT PLARY+A N  + +             N     GR
Sbjct: 114 --SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIA-KVYRRDNPAMTRGR 170

Query: 125 FRQFIQCDVDNVGSSAET 142
           +R+F QCD D  G+    
Sbjct: 171 YREFYQCDFDIAGTYDPM 188


>gi|210616267|ref|ZP_03291017.1| hypothetical protein CLONEX_03238 [Clostridium nexile DSM 1787]
 gi|210149865|gb|EEA80874.1| hypothetical protein CLONEX_03238 [Clostridium nexile DSM 1787]
          Length = 371

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 101/375 (26%), Positives = 166/375 (44%), Gaps = 46/375 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ +   G  D    E+ IR+ ++  I++ Y  +GF  +ETP +E+ ++L      ++  
Sbjct: 5   LKKKPVTGMKDMLPAEMEIRDYVIQMIKDTYRTFGFSSMETPCVEHIENLCSKQGGDN-- 62

Query: 67  NKGVFSLQDDDGQWI-------------SLRYDLTAPLARYVAENFDTIVFPCRTYRIGP 113
            K +F +     +                LRYDLT PL+RY A N   +  P +  ++G 
Sbjct: 63  EKLIFKILKRGEKLKLDTAKEEMDLVDGGLRYDLTVPLSRYYANNASVLPSPFKALQMGN 122

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           V+R ++   GRFRQF+QCD+D +G  +  A+ E+ +     L  +  K     I      
Sbjct: 123 VWRADRPQRGRFRQFMQCDIDILGEPSNLAEIELILATTTLLGKLDFKNFTIRIND---- 178

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
               IL+ +  +   +  +   V   +DK+DK GL GV   L E                
Sbjct: 179 --RKILKAMAAYSGFEEKDYDTVFIILDKMDKIGLDGVAKELEEN------------GYA 224

Query: 234 SEQIDIMVSFLS--IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            E I+  +       +  + +    E ++G +  E   + L +I   V  +     ++  
Sbjct: 225 KESIEKYLELFKKITNDIEGVRYCKEKLEGFLEAETA-DGLEMIISSVESAKEAEFKVSF 283

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T+VRG+ YYTG ++E                 GSVGGGGRYD ++ +F GQ  PA GF
Sbjct: 284 DPTLVRGMSYYTGTIFEI----------SMDEFGGSVGGGGRYDEMIGKFTGQPTPACGF 333

Query: 352 SIGISRLIVALKSLE 366
           SIG  R+++ L    
Sbjct: 334 SIGFERIVMLLLERG 348


>gi|218280872|ref|ZP_03487496.1| hypothetical protein EUBIFOR_00054 [Eubacterium biforme DSM 3989]
 gi|218217806|gb|EEC91344.1| hypothetical protein EUBIFOR_00054 [Eubacterium biforme DSM 3989]
          Length = 368

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 68/397 (17%), Positives = 154/397 (38%), Gaps = 49/397 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + +LP+G  D   +E   +  + + +  I+E++G++ I TP +EY ++       ++   
Sbjct: 3   QIQLPQGMKDTILQECEKKKYLQNILEQIFESFGYEEIITPTIEYYETYENAF--KNIQT 60

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++   D++G+ ++LR D+T P+AR  A  F     P R      VF+  +   G+  +
Sbjct: 61  TDMYKFFDENGRILTLRTDMTVPIARVCASKFKDSKPPFRYRYTSNVFKVRQKFAGKRSE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
              C ++ +G  +++    +C  +            +Y + I N +      + + L  +
Sbjct: 121 VTDCGIELIGLDSKSDVQVLCCALEVM-----KNFKNYTLEIGNVQFFQAACKVVRLSTE 175

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +                   +  +  L+ +    +   +     L+ + +D  +    + 
Sbjct: 176 E-------------------INTLADLIDKKSMVDLKIYLDSLYLSEKIVDFFMHLPFLC 216

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + ++ +         + ++  + +    + + + G   N + I    V  L+YYTG ++
Sbjct: 217 GDVNVLDEAYAYCFDESLKEVLDSMKECIQSLNELGCLEN-VTIDLGKVAHLDYYTGIIF 275

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E  +            V  S+  GGRYD L+ +F  +++PA GFS+ +  LI  +     
Sbjct: 276 EGYVS----------GVGTSILSGGRYDCLLKKFG-RDLPACGFSVKLDPLIDHVDVQLK 324

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                          + +      +       LR  G
Sbjct: 325 KK-----------FILYYPESKQIEAMKQANKLRKEG 350


>gi|313898683|ref|ZP_07832218.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium sp.
           HGF2]
 gi|312956567|gb|EFR38200.1| ATP phosphoribosyltransferase, regulatory subunit [Clostridium sp.
           HGF2]
          Length = 374

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 71/395 (17%), Positives = 140/395 (35%), Gaps = 45/395 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R  +P G  D    E   + R+  +I  ++++YG+  I TP +E+  +            
Sbjct: 3   RFAIPEGTRDLILGECTAKKRLQGAIEQVFDSYGYKEIVTPSIEFYQTYQTGFEQ--IQE 60

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++   D +G  ++LR D+T P+AR  A  F     P R      V++ ++   G+  +
Sbjct: 61  EAMYKFFDHNGSILTLRMDMTVPIARVAATKFKDQKPPLRFRYCANVYKVKESFAGKRNE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
              C ++ +G + + +D E+ +   + +E +  +     IG  N     G L  +     
Sbjct: 121 VTDCGIELLGLNEKQSDLEILVCALEVMECMQQQAYTLEIGNVNFFHTAGKLLGLSADE- 179

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                                + +  L+         ++     L  E  +  +    + 
Sbjct: 180 --------------------TELLADLIDRKSLSELKEYLHTLPLKDEDREFFLQLPWLC 219

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +  M +                 L  +   ++  GY  NRI      +  L YY+G ++
Sbjct: 220 GDAGMLKEALNCCFDDRLRSIVESLQELYAQLKALGY-ENRITFDLGKLPHLNYYSGILF 278

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E  +          P +  SV  GGRYD L+ +F  + +PA GFS+ +  ++  L   + 
Sbjct: 279 EGFV----------PGIGTSVLSGGRYDSLLEKFG-EPLPAIGFSVKLDAVLPVLDLKQK 327

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
                                   +     + LR 
Sbjct: 328 EATLTLCYPYARKV----------EALRKARELRK 352


>gi|253684312|gb|ACT33378.1| histidyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 225

 Score =  123 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 74/221 (33%), Positives = 115/221 (52%), Gaps = 8/221 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +     +G  D   +E  +RN+I  +  + +E YG  P+ETP L   + +       D  
Sbjct: 2   MEMRNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +++LQD   + ++LRYDLT P A+ VA N   +  P + Y IG VFR+     GRFR
Sbjct: 62  LKEIYTLQDQGKRELALRYDLTIPFAKGVAMN-PNLRLPFKRYEIGKVFRDGPIKQGRFR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +FIQCDVD VG  +  A+AE+  M  +    + +   +  I  NNRK+L+GILE I +  
Sbjct: 121 EFIQCDVDIVGVESVMAEAELMAMAFELFRTLNL---EITIQYNNRKLLNGILESINIPT 177

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
           +        V+ ++DK++K G+ GV+  + E         T
Sbjct: 178 E----LTSDVILSLDKIEKIGIDGVRKDVLERGISEEMADT 214


>gi|312144587|ref|YP_003996033.1| histidyl-tRNA synthetase 2 [Halanaerobium sp. 'sapolanicus']
 gi|311905238|gb|ADQ15679.1| histidyl-tRNA synthetase 2 [Halanaerobium sp. 'sapolanicus']
          Length = 420

 Score =  123 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 76/405 (18%), Positives = 148/405 (36%), Gaps = 40/405 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  D    E+R R  I ++IRN++E   +  + TP LE  +       +       +F 
Sbjct: 6   EGVRDILPAELRRRKTIYEAIRNVFEANAYREVITPTLESIELYT--GIEGLVEKNEMFK 63

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           + DD GQ + LR DLT P+AR  A  F     P +   +   +++        ++  Q  
Sbjct: 64  VVDDKGQILVLRPDLTMPIARLAASRFQDSPRPLKFSYLSSAYQSRNSQSLSLKEKTQAG 123

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           V+ +G  A  +D E+ +++  T++AV     D  I I +  +++ I   + +  +  +  
Sbjct: 124 VELIGCDALESDLEIIILLIKTMQAV--MVEDPLIDIGHADLINEIFTDLKIADEHTV-- 179

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KS 251
                             ++ LL         ++ K   ++ E  +++++  ++  E K+
Sbjct: 180 -----------------ALRKLLAAKNKIGIKNYLKKVEISQEAQNVLLTLPTLFGEPKN 222

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           +    E +  +         L  +   + +       I     ++    YYTG +++   
Sbjct: 223 VVAKLEAMPLSDETINVLETLEELFNRLEEFDLLK-FITFDPMLISRHGYYTGIIFKGYA 281

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                           +  GGRYD L  +F  +       ++G +  I  L    S T N
Sbjct: 282 ----------KGYSNLLASGGRYDNLTEKFGIEE-----AAVGFAVEIENLLDYLSRTEN 326

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             E           +   L       + LR     AE+     K+
Sbjct: 327 FIENEEKSFVVSYQEKADLKDAYDLAEALREINYTAELINNVEKS 371


>gi|152964269|ref|YP_001360053.1| histidyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151358786|gb|ABS01789.1| Histidine--tRNA ligase [Kineococcus radiotolerans SRS30216]
          Length = 428

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 161/364 (44%), Gaps = 39/364 (10%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +    RG  D    +   R   L  IR +Y ++GFD +ETP LE    L      E+   
Sbjct: 7   KVVPARGMRDVLPVDKARREHALHVIREVYRSFGFDEVETPALEELSRLESGQGGEN--E 64

Query: 68  KGVFSLQDDD---------GQ--WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
           K +F +             G+   + LR+DLT PL RYVA N   +  P +  +IGPV+R
Sbjct: 65  KMLFKVLRRGLPADEALLPGEAADLGLRFDLTVPLTRYVASNAAALRMPFKALQIGPVWR 124

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            E+   GR+RQF+QCD+D VG     A+ E+       L  +G+      + +N+R +L 
Sbjct: 125 AERPQKGRYRQFVQCDIDIVGEPGSLAEVELVTATHTALTRLGLTG--TTLRLNDRGVLT 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G+L   G   D+       VL  +DK DK GL GV   L              A+LT+  
Sbjct: 183 GLLTGCGFAADE----HGSVLITVDKADKVGLDGVLAELRAKGFAEEHVAALEASLTA-- 236

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
              ++    +     +              +    L  I++ +         +    T+V
Sbjct: 237 ---LLPLRDVRTPGVLEAALP----AAVPAEVVARLREIADAL-AVSAPDLEVAFDVTLV 288

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RG+ YYTG ++E  L          P    S+ GGGRYD +V RF G+++PA GFSIG  
Sbjct: 289 RGMGYYTGPIFEMSL----------PGSSSSIAGGGRYDNMVGRFSGRDLPAAGFSIGFE 338

Query: 357 RLIV 360
           R++ 
Sbjct: 339 RIVD 342


>gi|1174515|sp|P46220|SYH_SULSH RecName: Full=Putative histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|557202|gb|AAA72452.1| homologous to N-terminal part of Histidyl-tRNA synthetase (P30053);
           ORF1 [Sulfolobus shibatae]
          Length = 138

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 2/129 (1%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + E  RG  D    +      +    R++   YG+  I TP++E          +E R  
Sbjct: 3   KFETVRGMKDYIGIDAEKIRYLESIFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRET 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++  +D   + +SLR ++T  +AR   +N  +   P R +  G V+R ++   GR+R+
Sbjct: 63  --MYVFKDKADRELSLRPEITPGVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYRE 120

Query: 128 FIQCDVDNV 136
           F Q  ++ +
Sbjct: 121 FRQAGIEMI 129


>gi|298490239|ref|YP_003720416.1| histidyl-tRNA synthetase 2 ['Nostoc azollae' 0708]
 gi|298232157|gb|ADI63293.1| histidyl-tRNA synthetase 2 ['Nostoc azollae' 0708]
          Length = 404

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 90/415 (21%), Positives = 168/415 (40%), Gaps = 52/415 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D    ++  +  I D ++ ++  +G+  I T  LE  D+L          
Sbjct: 1   MVYQPAAGARDLLPLDVAQKRWIEDRLQQVFHRWGYHRIITSTLERMDTLMAGGA---IQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK--HGPGR 124
              V  LQ+   + + LR +LTA +AR V  +     +P R Y    VFR         R
Sbjct: 58  RHKVIQLQNGQDEELGLRPELTASIARTVVTSMAEATYPQRLYYNANVFRRSNWEKRHNR 117

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            +++ Q  V+ +GS    A+AE+ +++A+ LEA+ +    +H+ +    I   +L+    
Sbjct: 118 QQEYYQAGVELLGSGGLLANAEVLLLVANCLEALDLWG--WHLILGEAGITKFLLDAFPT 175

Query: 185 HGDDKLNERLIVLR--AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
           H   K+   +  L   A+D L           L E   + +         +++ +  + S
Sbjct: 176 HVRSKVRSAIAHLDRVALDTLP----------LSEELHERARIMLDLRGNSADVLAKISS 225

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L++D ++               ++  N L  + EL+   G     + +  ++++ ++YY
Sbjct: 226 -LNLDADQ---------------QEAVNNLKSLVELLESEGKFP--LILDLSLIQTIDYY 267

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIV 360
           TG V+E +                 +G GGRYD L  +   +G+N+P  GF + I  L  
Sbjct: 268 TGIVFEVV--------SNTDGQAQVLGRGGRYDQLLGLYHPQGENIPGIGFELSIDDLYQ 319

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGS 413
            L S +                +    ++ +    Y Q LR +   +R EM LG 
Sbjct: 320 LLASTQQLPQTTPASNW---LVVPESKNADAAAFAYAQQLRDSTNLVRVEMDLGG 371


>gi|304446078|pdb|3OD1|A Chain A, The Crystal Structure Of An Atp Phosphoribosyltransferase
           Regulatory SubunitHISTIDYL-Trna Synthetase From Bacillus
           Halodurans C
 gi|304446079|pdb|3OD1|B Chain B, The Crystal Structure Of An Atp Phosphoribosyltransferase
           Regulatory SubunitHISTIDYL-Trna Synthetase From Bacillus
           Halodurans C
          Length = 400

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 83/400 (20%), Positives = 148/400 (37%), Gaps = 43/400 (10%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
                E P G  D   +  + +  I D        +G+D IETP LEY +++G       
Sbjct: 6   KPFXFEKPFGXRDTLPEWYKTKKNICDQXTEEINLWGYDXIETPTLEYYETVGVVSA--- 62

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
             ++ +F L D  G  + LR D TAP+AR VA +     +P R      V+R +++  G+
Sbjct: 63  ILDQQLFKLLDQQGNTLVLRPDXTAPIARLVASSLKDRAYPLRLAYQSNVYRAQQNEGGK 122

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             +F Q  V+ +G    +AD E+  +    L+  G+   ++ + I +   ++ +L  +  
Sbjct: 123 PAEFEQLGVELIGDGTASADGEVIALXIAALKRAGLS--EFKVAIGHVGYVNALLXDVVG 180

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           +                         ++  L E       +  K  NL++     + + L
Sbjct: 181 NEQRA-------------------DRLRRFLYEKNYVGYREHVKSLNLSTIDKSRLXNLL 221

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           S+   ++  E    +  T  G+    E   + E++   G  S  +K   T+V    YYTG
Sbjct: 222 SLRGGRAAIEEARGLIQTEKGKTALAEXTKLYEVLESYG-ASEYVKFDLTLVLHXSYYTG 280

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+E       +           +  GGRYD L+S+F          + G    I  L  
Sbjct: 281 VVFEGYGNRLGV----------PLCSGGRYDELLSKFHRPAQ-----ATGFGVRIDLLVE 325

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             +            I      ++   +     +  R  G
Sbjct: 326 ALNGEIISNGHEQTCIL---FSNERRFEAIELARKKRANG 362


>gi|205375109|ref|ZP_03227900.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           coahuilensis m4-4]
          Length = 391

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 160/406 (39%), Gaps = 52/406 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D        +N++  SI  + E+YG++ +ETP LEY ++     
Sbjct: 1   MTK--LFMFEKPLGMRDTFPSVYLKKNKLKRSIERVVESYGYEFLETPALEYFET---VG 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                P + +F L D +G  + LR D+TAP+AR  A        P R      V+R ++ 
Sbjct: 56  EVSTVPEEQMFKLLDTEGHTLVLRPDMTAPIARVAASKLLKEKIPRRLAYSANVYRAQQR 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  ++ +G    +ADAE+  ++   LE  G+K  ++ + I +   +  ++ 
Sbjct: 116 EGGRPAEFEQLGIEYIGDQTISADAEVISLLNQALEQAGVK--NFTVAIGHIGFVKELVR 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG--DFTKGANLTSEQID 238
           +I    +        +L  + + +  G +     L     D               E   
Sbjct: 174 EIVGTEER----CEHILHYLYEHNFVGFEEHVESLSISTIDKKRLSKLLTFKGTADELSQ 229

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++        E+ +                  +L+ + +++   GY+ N I     +V  
Sbjct: 230 LVDELKGQTGEEELQ-----------------DLLSLYQILLAYGYSEN-ITFDLGLVSH 271

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           + YYTG ++E  +            +   VG GGRY+ L+ +F  +N  ATGF I +  L
Sbjct: 272 VSYYTGILFEVYV----------DGIGFPVGSGGRYNQLLQKFG-KNASATGFGIRLDYL 320

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           + A + LE  ++            +    + L +        R  G
Sbjct: 321 VEATEELEKESS----------VLVLFSQERLGEAATLAYEKRMKG 356


>gi|302336080|ref|YP_003801287.1| ATP phosphoribosyltransferase [Olsenella uli DSM 7084]
 gi|301319920|gb|ADK68407.1| ATP phosphoribosyltransferase [Olsenella uli DSM 7084]
          Length = 561

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 148/405 (36%), Gaps = 41/405 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    PRGF D    E   R RI    R  +  +G+ P+E PL+E   SL +    +D P
Sbjct: 1   MTVRTPRGFRDILPTEALARERIRAQARACFAGHGYLPVEPPLIEDRSSLEQGGRMQDSP 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
               F L D DG  + LR DLT P+AR V+  F     P R     PV R      G+ R
Sbjct: 61  ----FQLFDADGSLLVLRPDLTLPIARMVSARFSDADLPVRLRYEAPVVREGSALGGQPR 116

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           QF Q  V+  G +  + + E+  ++A++L+A+G+    + I   +   L  +L+      
Sbjct: 117 QFTQMGVELFGDTDASPEVEVMSLLAESLDALGVPA--WRISCGSVSPLTALLDACAPS- 173

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS--EQIDIMVSFL 244
                    VLR +   D  GL  +           +    +   L    + ID + + L
Sbjct: 174 ---KAFCEEVLRLVHGSDLVGLDELVAAAEGLPRAAARALHRICRLAGGVQVIDEVDALL 230

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +       H     ++          EL      +   G    R+    +I+   +YYTG
Sbjct: 231 AEAGIARGHRGTAQLR----------ELACGLPGLVADG----RLSFDFSIINSFDYYTG 276

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V++A       +          +  GGRYD +++      V + GF++ + R    L  
Sbjct: 277 IVFKAYSEATTAS----------IASGGRYDAVLANLGRPGVASCGFALSLERTQEVLGE 326

Query: 365 LESSTNNIKE--MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
              S             +         L         L  AG+  
Sbjct: 327 QGESGVVSARAGNAERPLRIAVPKGGLLKDAIRL---LEEAGLPV 368


>gi|21724237|gb|AAM75384.1| histidine-tRNA synthetase [Candida albicans]
          Length = 264

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 108/263 (41%), Gaps = 33/263 (12%)

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              +  E++K   + +KG  E+ ++++ V         +    ++ RGL+YYTG +YEA+
Sbjct: 11  EYLQSSEILKSNDSAQKGIEEMQILADYVDAFDITQ-YLSFDLSLARGLDYYTGLIYEAV 69

Query: 311 LGFPVMNEKQKP-------------VVFGSVGGGGRYDGLVSRFKG-QNVPATGFSIGIS 356
                  E                 V  GS+  GGRYD LV  F   +++P  G S G+ 
Sbjct: 70  TAASAPPENATELKAKSKDDDASAYVGVGSIAAGGRYDNLVGMFSNGKSIPCVGVSFGVE 129

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYTQMLRTAGIRAEMFLGS 413
           RL   +K+  +  N       V +            L +    T  L  AGI AE    S
Sbjct: 130 RLFSIIKNRANLNNISANHTDVFVMAFGGGEGWNGFLKERMEITNKLWKAGINAEYLYKS 189

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             N   Q   A++    LA+I G  E  +G L+IK L +G+E   E+             
Sbjct: 190 KANIRKQFDAAEKAGAKLAVILGKEEYPQGQLRIKVLGQGEENEGEL------------- 236

Query: 474 ITIPISELVSTVKKILQENKEEI 496
             +   EL++ V+  L  + ++I
Sbjct: 237 --VTKDELLAAVQAKLSSDIDDI 257


>gi|330720580|gb|EGG98850.1| Histidyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 317

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 80/377 (21%), Positives = 148/377 (39%), Gaps = 65/377 (17%)

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           +FR E+   GR+RQF Q  V+  G +    DAE+ M+ A     +G+        +    
Sbjct: 1   MFRYERPQKGRYRQFHQIGVETFGMAGPDIDAELIMLSARLWRELGLLD-----HVTLEI 55

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
              G  E    + DD +      +  +DK  +  L    L + + +  ++      A   
Sbjct: 56  NSLGSAEARARYRDDLVTFLEKHIDRLDKDSQRRLSSNPLRILDSKNPDTQALLDEAPNF 115

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            + +D                           ++  +    +   +  +G      +++ 
Sbjct: 116 KDYLD---------------------------QESADHFQQLLARLDAAG---IAYQVNP 145

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
            +VRGL+YY+  V+E +               G+V  GGRYDGLV +  G+  PA GF++
Sbjct: 146 RLVRGLDYYSKTVFEWVTAE--------LGAQGTVCAGGRYDGLVEQLGGKPTPAVGFAM 197

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFL 411
           G+ RLI+ L++L+   +N+ +   + + +    +   S      + LR+    +R ++  
Sbjct: 198 GVERLILMLQTLQCIPDNLSKTADIYVASAGEGAS--SAALQVAETLRSGFENLRVQVD- 254

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            +   F  QLK AD+     A++ G  E ++  + +K L  G E                
Sbjct: 255 CTGGGFKGQLKRADKSGADYALLIGEQELAQSEVTVKPLRGGAE---------------- 298

Query: 472 AQITIPISELVSTVKKI 488
            Q  +    LV   KK+
Sbjct: 299 -QARVKSDGLVEHFKKL 314


>gi|309774760|ref|ZP_07669782.1| ATP phosphoribosyltransferase regulatory subunit
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917445|gb|EFP63163.1| ATP phosphoribosyltransferase regulatory subunit
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 374

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 75/406 (18%), Positives = 152/406 (37%), Gaps = 46/406 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +  +P G  D    E   + R+ D+I  ++++YG+  I TP +E+  +           +
Sbjct: 3   KFAIPEGTRDLILGECTAKKRLQDAIEQVFDSYGYKEIVTPSIEFYQTYQTGFEQ--IHD 60

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + ++   D +G  ++LR D+T P+AR  A  F     P R      V++ ++   G+  +
Sbjct: 61  EQMYKFFDHNGGILTLRMDMTVPIARVAATKFKDQKPPLRFRYCANVYKVKESFAGKRNE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
              C ++ +G   + +D E+ +   + +E   +K+  + + I N       +E +GL  D
Sbjct: 121 VTDCGIELLGLDEKQSDLEILVCALEVME--CMKQASFTLEIGNVNFFHTAVELLGLTKD 178

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +                      +  L+         ++ +   L +      +    + 
Sbjct: 179 ETQI-------------------LADLIDRKSLTELKEYLETLRLDAVDKQFFLQLPWLC 219

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
               M +           +     L ++ E +   GY  +RI      +  L YY+G ++
Sbjct: 220 GSADMLQEALGFCFDARLKAIVENLQLLYEQLSALGYG-DRITFDLGKLPHLNYYSGILF 278

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E  +            +  SV  GGRYD L+ +F  + +PA GFSI +  ++  L   + 
Sbjct: 279 EGFVE----------GIGTSVLSGGRYDSLLEKFG-EALPAIGFSIKLDAVLPVLHLKQQ 327

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                               +   +     + LR +  R E+  G 
Sbjct: 328 EATLTLCYPY----------EKKVEALRQAKELRKST-RVELLCGD 362


>gi|46204349|ref|ZP_00050106.2| COG0124: Histidyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 129

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/128 (33%), Positives = 76/128 (59%), Gaps = 1/128 (0%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           ++  +   ++  P  +  +  D +++++YQ     LR   IRAE++LG++     Q+KYA
Sbjct: 1   MDHKSRWWRDGKPGPVVVLVLDRENIAEYQALVARLRADNIRAELYLGAAG-MKAQMKYA 59

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           DRR  P+ +IQG+ ER  G +QIKDL +G   +  I +N  W+ AR AQ+++P+  +V  
Sbjct: 60  DRRRAPVVVIQGSNEREAGEVQIKDLIEGARAAEAIASNAEWKAARPAQVSVPVERMVEA 119

Query: 485 VKKILQEN 492
           V++ L  +
Sbjct: 120 VRETLARH 127


>gi|169826037|ref|YP_001696195.1| ATP phosphoribosyltransferase regulatory subunit [Lysinibacillus
           sphaericus C3-41]
 gi|226702201|sp|B1HVP6|HISZ_LYSSC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|168990525|gb|ACA38065.1| ATP phosphoribosyltransferase regulatory subunit [Lysinibacillus
           sphaericus C3-41]
          Length = 385

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 86/437 (19%), Positives = 160/437 (36%), Gaps = 61/437 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D   +       +  + R+     G++ I+TP +EY D++GK        + 
Sbjct: 2   FEKPLGMRDTFPQIFEKVEAVRQTGRDFLTKRGYEFIKTPAVEYFDTVGKASA---IADT 58

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D  G  + LR D+T P+AR         + P R      VFR ++   GR  +F
Sbjct: 59  HLFKLVDSQGNTLVLRPDMTTPIARVATSKLLKEMIPQRLAYFASVFRAQEAEGGRPAEF 118

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G  +  ADAE+ +   + L+ + ++     I   +  IL+ IL+      + 
Sbjct: 119 DQMGIELIGDQSVFADAEVIVTAMELLKHLKLEAFKVTI--GHAGILNCILQDYTESIEQ 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +                     ++ LL         +     NL   + D ++ F+   +
Sbjct: 177 QT-------------------TLRTLLVHRNYVGFEEAVDSFNLPKAKADALLQFIEEAM 217

Query: 249 E-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           + K + ++ + V+   A        +     + +    +  +    T+   + YYTG ++
Sbjct: 218 DVKDIRDIEKYVRKNDALV-----YMQQLAQLLEMADLAAYVTFDFTLSSHMSYYTGMLF 272

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                   +G GGRYDGL+  F  +     G +    R+   L++L  
Sbjct: 273 EVFA----------LGSGFPLGNGGRYDGLLEVFGSK----AGATGFSIRVDRLLETLHG 318

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS----KNFGNQLKY 423
            +   +E        +  D +      +    LR AG  A + L SS    + F      
Sbjct: 319 QSEMQQEAT-----VVLFDEEQFEAALIKVNTLRAAGKLATLQLRSSLVDEEAFLAHFTE 373

Query: 424 ADRRNCPLAIIQGTGER 440
                    ++ G  E 
Sbjct: 374 --------VVVVGQEEI 382


>gi|225389028|ref|ZP_03758752.1| hypothetical protein CLOSTASPAR_02773 [Clostridium asparagiforme
           DSM 15981]
 gi|225044903|gb|EEG55149.1| hypothetical protein CLOSTASPAR_02773 [Clostridium asparagiforme
           DSM 15981]
          Length = 185

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 3/164 (1%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K  L    P G  D    E R +  + + I  +  +YG++ I+TP  EY D   K  
Sbjct: 1   MAEKNYL-IHTPEGVRDIYGAECRRKLAVQEKILQVLYSYGYEHIQTPSFEYFDIFSK-- 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                  + +F   D D + + LR D+T  +AR+VA+       P R   +   F+N   
Sbjct: 58  DRGSVGQRELFKFFDRDNETLVLRPDMTPAVARFVAKYHCEDPMPLRLCYLERTFKNNSS 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
             GR ++  +   + +G     ADAEM  M+ D+L A G++   
Sbjct: 118 YQGRLKERTETGAEMIGDDCADADAEMIAMVIDSLRAAGLQEFQ 161


>gi|99034469|ref|ZP_01314463.1| hypothetical protein Wendoof_01000732 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 343

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 82/404 (20%), Positives = 140/404 (34%), Gaps = 73/404 (18%)

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +S  D  G+ I+LR + TA + R + E         + +  GP FR E+   GR RQF Q
Sbjct: 1   YSFNDKGGKSITLRPEFTAAIVRLLIEKKLQTP--IKLFSTGPAFRYERPQKGRQRQFHQ 58

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKR---------NDYHIGINNRKILDGILEK 181
            + +  G     AD E+  +    L   GI +          D       R+ L     K
Sbjct: 59  INFEVFGIEDPKADIELISLAQHLLTEFGINKNVKLEINSLGDGETITKYREALILYFTK 118

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 +            D  ++     +++L  +   D S                + 
Sbjct: 119 YQNDLSE------------DSKNRLIKNPLRILDSKDEKDKS---------IISDAPKIS 157

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           ++ + +      ++   +                               +++ +VRGL+Y
Sbjct: 158 NYYTKESSDFFEQILNGLT-----------------------ILDIPYTVNNKLVRGLDY 194

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           Y   V+E +         +     G+V  GGRYD LVS   G++ PA GF+ GI R++  
Sbjct: 195 YCHTVFEFVT--------EDLGAQGAVFAGGRYDNLVSSVGGKHTPAIGFAGGIERIMEL 246

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +        N        I  +    ++          LR  G+        S     ++
Sbjct: 247 I--------NYSPKEERPIYLIPISREAEKHALTLANELRRNGLYVIYEY--SGTLRTRM 296

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           K A++ N   A+I G  E S   L+IK++  G+E      N   
Sbjct: 297 KKANQANAKAALIFGDEELSSKTLKIKNMDTGEEKIIARDNTIE 340


>gi|327438794|dbj|BAK15159.1| ATP phosphoribosyltransferase [Solibacillus silvestris StLB046]
          Length = 386

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 90/429 (20%), Positives = 161/429 (37%), Gaps = 53/429 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           K+  E P G  D   +       I  + R +    G++ I+TP +EY D++GK     D 
Sbjct: 5   KM-FEKPLGMRDTLPEIYEKLELIRSTGRALLRERGYEIIKTPSVEYYDTVGKASAISD- 62

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               +F L D  G  + LR D+T P+AR           P R      VFR ++   GR 
Sbjct: 63  --ARLFKLVDSQGNTLVLRPDMTTPIARVATSKLLKEKIPQRLAYFANVFRAQQREGGRP 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  ++ +G ++  ADAE+ M   D ++A   +  D+ + I +  +L  IL+     
Sbjct: 121 AEFDQMGIELIGDNSVYADAEVIMTAIDLVKA--YQITDFKVTIGHAGVLSCILKDYT-- 176

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + L  L        F    +   L + ++D    +   A ++   I+ +  ++ 
Sbjct: 177 ESDAQADDLNDLLVQRNFVGFEEAVLAFDLPKTKSDALLAYIADA-ISLPSIEAIEKYVR 235

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +                        +  ++ ++  +GY    I    T+   + YYTG 
Sbjct: 236 KN-------------------DALEYMRNLARILDAAGY-EEYIAFDFTLSSHMSYYTGM 275

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           ++E                   +G GGRYDGL+  F    V ATGF + + R+  A+  +
Sbjct: 276 LFEVFAS----------GSGFPLGNGGRYDGLMQHFG-SQVGATGFGLRVDRVFEAMPKI 324

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM-FLGSSKN---FGNQL 421
           +   +            +   ++  ++     Q LR  G +         +N        
Sbjct: 325 KVEKDE---------VLVLFTAERFAEALEAVQQLRAQGKQVTFQSYEGIENIEALKAHF 375

Query: 422 KYADRRNCP 430
           K  +  N  
Sbjct: 376 KIINEYNSR 384


>gi|145615884|ref|XP_001414981.1| hypothetical protein MGG_13472 [Magnaporthe oryzae 70-15]
 gi|145009671|gb|EDJ94327.1| hypothetical protein MGG_13472 [Magnaporthe oryzae 70-15]
          Length = 409

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 130/389 (33%), Gaps = 87/389 (22%)

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
           Y   I + +IL  I+E       +K   ++   + +D L +   + VK  + E       
Sbjct: 43  YDPMIPDAEILRIIVEVFEALNFEKFTIKINHRKVLDGLFEMPWEEVKKEMLEK------ 96

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKS---MHELYELVKGTIAGEKGFNELVVISELVRK 281
                  ++++  D +  ++     K    + +    ++     + G  ++ ++   +  
Sbjct: 97  ------GISAQVADSIGEYVKHKGGKDIVDLLKADAKLEKNENAKAGIEDMNLLFTYLDA 150

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAI------------------------------- 310
            G   +++    ++ RGL+YYTG +YE +                               
Sbjct: 151 FGVT-DKVSFDLSLARGLDYYTGVIYEVVTEGSAPAVAPKPSNGETEAKVSGEGAAQPGT 209

Query: 311 -------------------LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF----KGQNVP 347
                              L           V  GS+  GGRYD LV  F        +P
Sbjct: 210 ENAAAAPVDNKKKAPKKKQLSEDDDRSDDPTVGVGSIAAGGRYDNLVGMFSGKGDKGQIP 269

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD-----SLSKYQMYTQMLRT 402
             G S G+ R+   + + ++          V +  M           L +     + L  
Sbjct: 270 CVGISFGVDRIFSIMSAKQAREQATVRQNEVDVYVMAFGGGKDFTGLLPERIAVARQLWD 329

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGI+AE           Q K A+    PLA+I G  E   G +++K L     L ++  +
Sbjct: 330 AGIKAEFSAKVKPKLQQQFKVAEDGGVPLAVILGEDELKAGKVKLKILG----LPKDHPD 385

Query: 463 NESWREARVAQITIPISELVSTVKKILQE 491
            E           +   EL + +KK+L  
Sbjct: 386 KEGHL--------VSRDELAAEIKKVLSA 406


>gi|166366909|ref|YP_001659182.1| ATP phosphoribosyltransferase regulatory subunit [Microcystis
           aeruginosa NIES-843]
 gi|189028231|sp|B0JS32|HISZ_MICAN RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|166089282|dbj|BAG03990.1| histidyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 405

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 78/436 (17%), Positives = 153/436 (35%), Gaps = 43/436 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I D ++++++ +G+  I T  +E+ D+L          
Sbjct: 1   MIHQPPAGTRDLLPLEVTQKGWINDRLQSVFQRWGYQRIVTSTIEWLDTLTAGGA---ID 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-PGRF 125
              V  L  D      LR +LTA +AR          +P R      VFR    G  GR 
Sbjct: 58  PSTVIQLHGDSQGLSGLRPELTASIARSAVTRMSGESYPQRLCYRANVFRRPSAGYHGRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  V+ + S    ADAE+ +++AD  +++ +   ++ I +    +   +L      
Sbjct: 118 VEFYQAGVELLFSGGLLADAEILLLLADCFDSLAV--PNWQIILGEAGLTRSLLSPFPAP 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +++   L +L  +   +                                      F  
Sbjct: 176 LREQVKRCLALLDYVSLENLPYPNETLRQ-----------------------QARQLFHL 212

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + +     L+    + +K  N L  + EL+         + +  ++++  +YYTG 
Sbjct: 213 RGNPEDVLAQVALLAQEESAQKAVNNLKSLVELLNADRSGPFPLILDLSLIQTFDYYTGI 272

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V++A+                 +G GGRYD L+  F      +         +    +SL
Sbjct: 273 VFKAV--------SDHQQNLSILGQGGRYDQLLGVF-HPQGQSAPGIGFSLNIEELHESL 323

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLK- 422
            S      +  P+    +   +++        + LR     +R  + LG  ++   Q++ 
Sbjct: 324 LSGQTLPTQAAPLDWLLIPLGNNAQIATFSKARSLRNGDPNLRVAIDLG-GRS-EAQIRT 381

Query: 423 YADRRNCPLAIIQGTG 438
           YA  R           
Sbjct: 382 YARDRMIKNLAWVQED 397


>gi|308175230|ref|YP_003921935.1| histidyl-tRNA synthetase component of ATP phophoribosyltransferase
           [Bacillus amyloliquefaciens DSM 7]
 gi|307608094|emb|CBI44465.1| histidyl-tRNA synthetase component of ATP phophoribosyltransferase
           [Bacillus amyloliquefaciens DSM 7]
 gi|328555202|gb|AEB25694.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus
           amyloliquefaciens TA208]
 gi|328913563|gb|AEB65159.1| histidyl-tRNA synthetase component of ATP phosphoribosyltransferase
           [Bacillus amyloliquefaciens LL3]
          Length = 390

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 151/401 (37%), Gaps = 46/401 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D        + ++  ++ ++ + +G+  +ETP LE+ ++            +
Sbjct: 4   FEKPHGMRDTLPGLYEAKKKVRSTLTDLIDKWGYQFMETPTLEFYET---VGAQSAIDEQ 60

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D DG+ + LR D+T P+AR  A        P R      V+R ++   GR  +F
Sbjct: 61  QLFKLLDQDGKTLVLRPDMTGPIARVAASKLHKNNHPLRAGYAASVYRAQEREGGRPAEF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + +G  + +ADAE+  + A  L+  G++   + I I +  + D +  ++  + + 
Sbjct: 121 EQVGAELIGDGSTSADAEVIALAAGALKNAGLR--QFKIAIGHAGLADELFVEVLGNAER 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                                 ++  L E       +  K   L+S     ++  L +  
Sbjct: 179 A-------------------DVLRRFLFEKNYVGYKEHVKSLPLSSIDKSRLLGLLELRG 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            K +      + G I+G+    EL  + +++   G     I++   +V  + YYTG ++E
Sbjct: 220 GKEICAKAGEIIG-ISGQSVIQELGDLWDILEDYGCAE-HIRLDLNMVSHMSYYTGILFE 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                              +G GGRY+ L+  F          +    R+   +++L   
Sbjct: 278 VYAANVGF----------VIGSGGRYNNLLGHF----GSPAPATGFGLRIDRLIEALGIR 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                         +    +   +  ++ +  R  G +  +
Sbjct: 324 GETSDAD------AVIFSKEQRPQAILFAEEERARGRKVVL 358


>gi|170694780|ref|ZP_02885931.1| Histidine--tRNA ligase [Burkholderia graminis C4D1M]
 gi|170140411|gb|EDT08588.1| Histidine--tRNA ligase [Burkholderia graminis C4D1M]
          Length = 310

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 125/366 (34%), Gaps = 62/366 (16%)

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           ++ +G +   ADAE+ MM     + +G+      I                +   +K  +
Sbjct: 1   MEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLEINSLGLAEERAAHRVELIAYLEKHMD 60

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L      D   +     +++L  +                ++    ++ FL  +     
Sbjct: 61  VLDE----DAKRRLYTNPLRVLDTKN---------PALQEVAQNAPKLIDFLGEESRAHF 107

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             L  ++K                         +    I+  +VRGL+YY   V+E +  
Sbjct: 108 EGLQRILKAN-----------------------NIPFTINPRLVRGLDYYNLTVFEWVT- 143

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                   K    G+V  GGRYD L+ +  G+   A G+++GI R++  LK  +      
Sbjct: 144 -------DKLGAQGTVAAGGRYDPLIEQLGGKATAACGWAMGIERILELLKEEQLVP--- 193

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNC 429
            E     +  +     +  +  +  + LR  G+   +   +     +F +Q+K AD    
Sbjct: 194 -EDEGCDVYVVHQGDAAREQAFIIAERLRDTGLDVILHCSADGQSASFKSQMKRADASGA 252

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
             A++ G  E + G + +K L              +    +  Q  +P  +L   +   +
Sbjct: 253 AFAVVLGEDEIANGTVGVKPLRD-----------TNANGGKNEQHNVPAEDLTEFLINAM 301

Query: 490 QENKEE 495
               E+
Sbjct: 302 VATAED 307


>gi|159030715|emb|CAO88388.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 405

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 85/438 (19%), Positives = 161/438 (36%), Gaps = 47/438 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    E+  +  I D ++++++ +G+  I T  +E+ D+L          
Sbjct: 1   MIHQPPAGTRDLLPLEVTQKGWINDRLQSVFQRWGYQRIVTSTIEWLDTLTAGG---TID 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-PGRF 125
              V  L  D      LR +LTA +AR          +P R      VFR    G  GR 
Sbjct: 58  PSTVIQLHGDSQGLSGLRPELTASIARSAVSRMSGESYPQRLCYRANVFRRPSTGYHGRQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  V+ + S    AD E+ +++AD  +  G+   ++ I +    +   +L      
Sbjct: 118 VEFYQAGVELLFSGGLLADVEILLLLADCFD--GLSVPNWQIILGEAGLTRSLLSPFPDP 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +++   L +L  +   +                                      F  
Sbjct: 176 LREQVKRCLALLDYVSLENLPYPNETLRQ-----------------------QARQLFHL 212

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + +     L+    + +K  N L  + EL+     +   + +  ++++  +YYTG 
Sbjct: 213 RGNPEDVLAQVALLAQEESAQKAVNNLKSLVELLNADRASPFPLILDLSLIQTFDYYTGI 272

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALK 363
           V++A+                 +G GGRYD L  V   +GQ+ P  GFS+ I  L  +L 
Sbjct: 273 VFKAV--------SDHQQNLSILGQGGRYDQLLGVFHPQGQSAPGIGFSLNIEELHGSLL 324

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQL 421
           S ++       +       +   +++        + LRT+   +R  + LG  ++   Q+
Sbjct: 325 SGQTLPTQAPPLDW---LLVPLGNNAQIATFSKARSLRTSDPNLRVAIDLG-GRS-EAQI 379

Query: 422 K-YADRRNCPLAIIQGTG 438
           + YA  R           
Sbjct: 380 RTYARDRMIKNLAWVQED 397


>gi|289427303|ref|ZP_06429018.1| putative histidine--tRNA ligase [Propionibacterium acnes J165]
 gi|289159502|gb|EFD07691.1| putative histidine--tRNA ligase [Propionibacterium acnes J165]
          Length = 303

 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 87/322 (27%), Positives = 137/322 (42%), Gaps = 40/322 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +   GF +       + N +   +   +E +GF PI T  +E  + L +        +
Sbjct: 3   RLKPLSGFPEFLPSGQMVENHVTRILEETFELHGFAPIRTRAVEPMEQLTRKGE----ID 58

Query: 68  KGVFSLQDD----------DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           K V+ + D               + L +DLT P ARYV EN   + FP R Y+I  V+R 
Sbjct: 59  KEVY-VVDRLHADSHDTRSGKDRLGLHFDLTVPFARYVLENAGHLYFPFRRYQIQKVWRG 117

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM--MADTLEAVGIKRN--DYHIGINNRK 173
           E+   GR+R+F Q D+D VG        ++     M   LE +  +       + +NNRK
Sbjct: 118 ERPQEGRYREFTQADIDIVGDQTLAEHHDVETPLVMLSALERLHTELGFPTVTMHVNNRK 177

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +G    +G+       + + VL+ +DK DK G   V+ LL +             NL+
Sbjct: 178 LSEGFYRGLGIA------DPMAVLQRVDKYDKIGPDAVRKLLVDE-----------LNLS 220

Query: 234 SEQIDIMVSFLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
            +     V+  SI       + ++ EL       E+G + L  +   V K      R+  
Sbjct: 221 DDAAAKCVALASIQSVDDSFIAKVRELGVANDMLEEGLDSLNRVVAAVNK--AVPGRMVA 278

Query: 292 SSTIVRGLEYYTGCVYEAILGF 313
           +  I RGL+YYTG VYE  L  
Sbjct: 279 NLKIARGLDYYTGTVYETELTG 300


>gi|62719444|gb|AAX93322.1| histidyl-tRNA synthetase [Lactobacillus sanfranciscensis]
          Length = 240

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 91/221 (41%), Gaps = 10/221 (4%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDE-DRPNKGVFSLQDDDGQWISLRYDLTAPLARYV 95
           +  Y +  +  P++E ++   +   D  D   K +++ +D  G+ I+LR + TA + R  
Sbjct: 1   FPRYNYAEMRPPMVEKTEVFSRTSGDSSDIVTKQMYTFEDKGGRSITLRPEGTAGVVRSF 60

Query: 96  AENFD---TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
            EN         P + Y +GP+FR E+ G    R+F Q   +++G+ +   DAE+  +  
Sbjct: 61  VENKLFGPEHPKPVKLYYMGPMFRYERPGATHNREFHQIGCESIGAVSPQIDAEVIRLAI 120

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D  + + I      +          +     +   ++  + L    + D   +     ++
Sbjct: 121 DIFQGLDIHDLRVELNTLGDDESRSVYRDTLVKYFEQFKDEL----SEDSQRRLEQNPLR 176

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +L  + R D       GA    + ++        DL+K++ 
Sbjct: 177 ILDSKDRNDQK--IVAGAPRLEDSLNERSKNYFNDLKKALD 215


>gi|251794195|ref|YP_003008926.1| ATP phosphoribosyltransferase regulatory subunit [Paenibacillus sp.
           JDR-2]
 gi|247541821|gb|ACS98839.1| histidyl-tRNA synthetase 2 [Paenibacillus sp. JDR-2]
          Length = 407

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 91/404 (22%), Positives = 160/404 (39%), Gaps = 44/404 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D     +     I   +    + +G++ I TP +EY D++G   
Sbjct: 1   MSKPK--VFEKPIGVKDYLPGAVAKLRHIERDVLACMKGWGYEQIITPTMEYYDTVGVAS 58

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   + +F L ++ G  + LR D+TAP+AR V+       FP R    G VFR+ + 
Sbjct: 59  STSD---QKLFKLLNNRGTTLVLRSDMTAPIARVVSSLLKESQFPLRLSYHGNVFRSIEE 115

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             GR  +F Q  V+ VG ++  ADAE+  +   +L+A G+  + + I I +   L+G+ E
Sbjct: 116 ESGREAEFFQTGVELVGDASAEADAEVVALAIASLKAAGV--DRFKIAIGHVGFLNGLFE 173

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      +                    + +K  L         +  +G  L       +
Sbjct: 174 ETLAGRVEAQ------------------EQLKSCLLNRDYVGYRESLRGLKLEEPVQREL 215

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              L +   + + E    +      +K    L  I ++++        + I  T++    
Sbjct: 216 EGILRLRGGQEICEQALQLSADATAQKSIRHLCEIWDVLKAYDVCE-HVLIDLTMIGDFS 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  +E                   V  GGRYD L+S+F  +  PATGF++  +R++ 
Sbjct: 275 YYTGMTFEGYAADLGF----------PVASGGRYDNLLSQFG-RPAPATGFALKTTRILE 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            + + E       +        + +D +  ++     Q LR  G
Sbjct: 324 LVGAEE-------DATGTTRVLIGYDGEGRAEALAAAQQLREQG 360


>gi|213610082|ref|ZP_03369908.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 280

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/311 (18%), Positives = 105/311 (33%), Gaps = 58/311 (18%)

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                     N R  L   LE+     D+            D   +     +++L  +  
Sbjct: 22  NSIGSLEARANYRDALVAFLEQHQETLDE------------DCKRRMYTNPLRVLDSKN- 68

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                              ++  +L  D  +    L +L+            L       
Sbjct: 69  --------PDVQALLNDAPVLGDYLDDDSREHFAGLCKLLDAAGIAYTVNQRL------- 113

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
                           VRGL+YY   V+E +               G+V  GGRYDGLV 
Sbjct: 114 ----------------VRGLDYYNRTVFEWVTNS--------LGSQGTVCAGGRYDGLVE 149

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
           +  G+  PA GF++G+ RL++ ++++            V I  +   + + S      + 
Sbjct: 150 QLGGRATPAVGFAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGAQTQSAAMTLAER 206

Query: 400 LRTA--GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           LR    G++     G   NF  Q   AD+    +A++ G  E + G + +KDL  G++ +
Sbjct: 207 LRDEMPGVKLMTNHGGG-NFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTA 265

Query: 458 REIKNNESWRE 468
               +  +   
Sbjct: 266 VAQDSVAAHLR 276


>gi|121997458|ref|YP_001002245.1| ATP phosphoribosyltransferase regulatory subunit [Halorhodospira
           halophila SL1]
 gi|121588863|gb|ABM61443.1| tRNA synthetase, class II (G, H, P and S) [Halorhodospira halophila
           SL1]
          Length = 392

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 79/410 (19%), Positives = 149/410 (36%), Gaps = 51/410 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +K +    LP G  +    E      +   + ++++++G++ I  P +EY ++L    
Sbjct: 1   MDRKAR--WMLPDGVDELLPPEAAQAEALRRRLLDLFDSWGYELIMPPFIEYLEALLTGT 58

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             +       F + D   G+ + +R D+T   AR V  +        R   IG   +   
Sbjct: 59  GRDLDV--QTFKVTDQLSGRTLGVRPDITPQAAR-VDAHQLRRKGITRLCYIGSTLQARA 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GP   R  +Q   +  G +   +D E+  +M  TL A G+     H+ + +  I + +L
Sbjct: 116 EGPAGSRNAVQLGAELYGHAGVESDLEVISLMLATLRAAGV--ERLHLDVGHVGIFEALL 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E +                    L     + +   L     D        A + + Q + 
Sbjct: 174 EDL-------------------GLGPAAEEALLDALQRKAGDEIAAVLAEAGVETAQAER 214

Query: 240 MVSFLSIDLEKSMHELYELVKGT--IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
           + +   +     + +  + V G    A  +   +L  +++ +         + +    +R
Sbjct: 215 LSALAGLHGGVEILDRAQTVLGWAGPAVAEALEQLRTVADSL-ARREPELPLHLDLGELR 273

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           G  Y+TG V+ A            P     +  GGRYDG+   F  +  PATG+S     
Sbjct: 274 GYRYHTGLVFAAYT----------PGYGQELARGGRYDGIGQAFG-RPRPATGYSAD--- 319

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
               LK+L +  + ++      +     D  +L         LR AG R 
Sbjct: 320 ----LKALLTLGHGVEGPAAGGVLAPWRDDPALHAR---VAELRRAGERV 362


>gi|160915357|ref|ZP_02077569.1| hypothetical protein EUBDOL_01365 [Eubacterium dolichum DSM 3991]
 gi|158432748|gb|EDP11037.1| hypothetical protein EUBDOL_01365 [Eubacterium dolichum DSM 3991]
          Length = 377

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 73/403 (18%), Positives = 150/403 (37%), Gaps = 49/403 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G  D    +  I+  + D I  +++ +G+D I TP LEY  +    +  E    + +
Sbjct: 12  IPEGTRDFVPAQYHIKQNVKDRIEKVFDAFGYDEISTPTLEYYQTYL--MGFEQLKEEAM 69

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L D  G  ++LR D+T P+AR+V+  +  +  P R      V++ + H  G+  +   
Sbjct: 70  YKLIDSSGSILALRMDMTVPIARFVSNKYKNVKKPLRFRYCADVYKQKAHLGGKQNEVSD 129

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
           C ++ +G S+E +D E+ +   + + ++      + + I    I     +K+ L  ++  
Sbjct: 130 CGIELIGLSSEESDLEVIVCAMEVMRSLNKH---FTLEIGEVNIFLKTCQKLALSKEEIE 186

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                + R         L+ +KL +          +  G     + +   + +   D  K
Sbjct: 187 TLADYIDRKSMLDLANYLETLKLPITYRTFFLKLPWLFGKG---DILQEALEYCQDDEVK 243

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +    +L+                    ++       +      +  L YY+G ++EA 
Sbjct: 244 EILFGLKLLD-------------------QQLRSLGYEVSFDLGKIAHLNYYSGIIFEAF 284

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                           SV  GGRYD L+ +F  +   A GFS+ +  +   L+ +     
Sbjct: 285 ----------MEGSGTSVLSGGRYDHLLEKFG-KPAYAIGFSVKLDYVFAVLEEVPLEKP 333

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                       + +      +   Y   LR    R +++   
Sbjct: 334 W----------ILYYPKAKTLEALRYAGELRKF-HRVQLYPRE 365


>gi|156088485|ref|XP_001611649.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154798903|gb|EDO08081.1| hypothetical protein BBOV_III005180 [Babesia bovis]
          Length = 548

 Score =  118 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 86/527 (16%), Positives = 171/527 (32%), Gaps = 91/527 (17%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK------------ 58
             RG       E   +  + D  R + + +GF      +L ++D                
Sbjct: 50  TVRGGQCFLPAEQHEQRILQDEWRRVSDLFGFAEYSIGVLAHADLFKSRGVQQNSDTGSL 109

Query: 59  ------------------FLPDEDRPN-------------KGVFSLQDDDGQWISLRYDL 87
                              LP+ D                  ++   D  G+ ++LR D+
Sbjct: 110 ANDHPDKGFGLTLGPSDHGLPETDIDTTDDISLNANQEHRNELYEFTDRKGRRLALRGDV 169

Query: 88  TAPLARYVAENF----------DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           T      + E++                 + + +   +R E+ G  R R  IQ   D VG
Sbjct: 170 TPQFMAMLKEHWELPIKHNLNALETKQITKWFTMADCWRYERPGHCRRRNHIQWTCDIVG 229

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
              E A+ E+  M+    + VG+   D  I +N+   L  +LE +G    D         
Sbjct: 230 IPNEDAEIELLTMLITFYKNVGLTNKDIAIHLNHVDALPTLLESMGKPVKDHTWMHQFR- 288

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
                        V     +   +           + ++I+ ++   SI     ++   +
Sbjct: 289 ------------KVIDKYRKINRNELCIALNQLGFSYDEINKLLD--SIANCSDINTYAK 334

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
           L        K    +V   E  +    +S+ + +  +IVRG +YYTG V+E         
Sbjct: 335 LFGNETPFVKSLQNIVHGVEHAQ----HSDWLHMDLSIVRGTDYYTGAVFECF------- 383

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
             +      ++ GGGRYD  +   +  +   +         I  ++++ S     +++  
Sbjct: 384 -DRMHPQHRAIAGGGRYDNYLGPKENNDRQLSYSVGFGMGNIGIIETMRSRNLLQEQIFT 442

Query: 378 VLITTMDHDSDSLS-------KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
            ++    H S  +                LR +GI+              L++A+R    
Sbjct: 443 DIVLYNPHSSSRVPLRGVDLVHVNKVLYSLRDSGIKV-FHYFQGTKLAKALEFAERA-SS 500

Query: 431 LAIIQGTGERSRGML--QIKDLAKGKELSREIKNNESWREARVAQIT 475
           +A+I    + + G L  Q+ ++    +     ++   + E      T
Sbjct: 501 IALIYPKLDDATGTLVYQVHNIPSKSKTLVAKEDIIQFLERMRRHKT 547


>gi|328949676|ref|YP_004367011.1| ATP phosphoribosyltransferase regulatory subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328450000|gb|AEB10901.1| ATP phosphoribosyltransferase regulatory subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 368

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 80/422 (18%), Positives = 144/422 (34%), Gaps = 68/422 (16%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +  G       E  +R ++L+ +R+++  +G++PIE P LE  D             +  
Sbjct: 2   IAEGTRYHLPPEAHLRQQLLERLRDLFYAWGYEPIELPALEVHDL-------THPLERRA 54

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP-GRFRQFI 129
           F L D +GQ + LR + T  +AR V   +   V P R    GP++  E     GR R+  
Sbjct: 55  FKLVDRNGQVLMLRSEFTTAVARLV-RAYPEAVLPVRYQYAGPLWLREADAELGRMREHT 113

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++ +G S+  ADAE+  +  + L+  G+   +  I +     +  ILE   L  D  
Sbjct: 114 QVGLELIGVSSPEADAELLELAWEALKVAGV--PEARIEVGLPSFVRDILEAARLPEDA- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              + ++  +    T       +   L     + +++   +   
Sbjct: 171 ------------------TEALRRAVDRKNTPELEALVEAHRLRGRVREAILALPDLYGG 212

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +         +       + L  + EL+         + +     R  EYYTG  + A
Sbjct: 213 VEVLREARGYALSERARIDLDWLERVLELL----PEGLEVLLDLGKARRYEYYTGIHFRA 268

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                 +           + GGGRYDG +  F           +   R   AL+      
Sbjct: 269 YTPDFGL----------PLMGGGRYDGGLLPFAAGFALGLERLMEARRAQAALE------ 312

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                             ++++  +   + LR  G R E+   +         YA RR  
Sbjct: 313 ----------------PPEAIATDRALARRLRAEGKRVELAWTAD--LEALRAYARRRGI 354

Query: 430 PL 431
             
Sbjct: 355 RY 356


>gi|195071957|ref|XP_001997110.1| GH23583 [Drosophila grimshawi]
 gi|193905661|gb|EDW04528.1| GH23583 [Drosophila grimshawi]
          Length = 265

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 37/284 (13%)

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKS 282
             +   L     D +  ++ +     + E       +K      KG   + ++ +     
Sbjct: 1   MVEEKGLDGATADKIGEYVRLSGGADLVEQLLADPKLKAVPNAVKGLEGMQLLLKYCALF 60

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK-------------QKPVVFGSVG 329
           G    RI    ++ RGL+YYTG +YE +L                     ++    GSV 
Sbjct: 61  G-LEQRISFDLSLARGLDYYTGVIYEGVLKVDPSPAGSPAKSSQNGEQAMEQGGTVGSVA 119

Query: 330 GGGRYDGLVSRFKGQ--NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           GGGRYD LV  F  +   VP  G SIG+ R+   L++  +++        V +       
Sbjct: 120 GGGRYDNLVGMFDPRGKAVPCVGVSIGVERIFSVLEAKFAASKVKLRTSDVEVYVASAHK 179

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
               +       L  AGI+AE     +     QL++ +    PLAI+ G  E ++G++++
Sbjct: 180 GLHEQRLRVLNQLWDAGIKAEHSYKLNPKLLAQLQHCEEHQIPLAIVLGDSELAQGIVKL 239

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +++   +E S                  +P+ EL   +++ LQ+
Sbjct: 240 REVTTRQESS------------------VPLVELPDEIRRRLQK 265


>gi|86606188|ref|YP_474951.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           JA-3-3Ab]
 gi|109892452|sp|Q2JUD2|HISZ_SYNJA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|86554730|gb|ABC99688.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           JA-3-3Ab]
          Length = 410

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 105/245 (42%), Gaps = 12/245 (4%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
              P G  D   +E++ R R+   +  ++  YG+  I TP LE  ++L           +
Sbjct: 8   LRPPTGARDFLPREVQRRERLEAQLTQVFRRYGYQRIITPTLEPLETLLAGGS---IRAE 64

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN--EKHGPGRFR 126
            V  L+D +G  + LR + TA + R  A    +   P R Y  G VFRN   + G    +
Sbjct: 65  AVLQLRDGEGTMLGLRPEFTASIVRAAATRLASGPLPLRLYYHGNVFRNSRREEGSYSSQ 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +G+    ADAE+ +++AD + AVG+   ++ + + +  + + +L  +    
Sbjct: 125 EFFQSGVELIGAGGWLADAEILLLLADCVRAVGLS--NWTLLLGDVSLTESLLNSVTPKA 182

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ-----GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
              +   +  L  +        +     G+++L   G+ +          ++ E++  + 
Sbjct: 183 QAAVRRAIAQLDYVYLEAAPLPEAARQIGLQILGLRGQPEQVLPQLAQLPVSPERLRDLR 242

Query: 242 SFLSI 246
               I
Sbjct: 243 QLCQI 247


>gi|126654004|ref|ZP_01725839.1| histidyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589521|gb|EAZ83664.1| histidyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 181

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 10/182 (5%)

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
            ++   +VRGL+YY    +E +                ++ GGGRY+GLV    G +VP 
Sbjct: 9   YEVDPNLVRGLDYYNHTTFEIMSTASGF------GAITTLCGGGRYNGLVQEIGGPDVPG 62

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            GF++ I RL++AL++       +     + +  +     +  K    T   R  G+  E
Sbjct: 63  IGFALSIERLLLALEAEGV---ELDTASGLDVYIIAMGDGAKQKAVELTSTFRAKGLATE 119

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M     +    Q+K ADR      I+ G  E       +K +  G++         ++  
Sbjct: 120 MDY-LDRKMKAQMKSADRLGAKYTIVLGETELEEQSAAVKHMESGEQHKVAFSELVNYLS 178

Query: 469 AR 470
            +
Sbjct: 179 QQ 180


>gi|126278352|ref|XP_001380972.1| PREDICTED: similar to Eukaryotic translation initiation factor
            2-alpha kinase 4 (GCN2-like protein) [Monodelphis
            domestica]
          Length = 1666

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 87/479 (18%), Positives = 169/479 (35%), Gaps = 55/479 (11%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             +I+  + ++I  I++ +G   + TPLL     L +     +     +    D  G  + 
Sbjct: 1078 AKIQQHVCETITRIFKRHGAVELYTPLL-----LPRNRQTYEHNEAAL--FMDHSGMLVM 1130

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            L YDL  P ARYVA N  + +      R                   F      +     
Sbjct: 1131 LPYDLRIPFARYVARNNISNLKRYCIERVFRPRKLDRCHPKELLECAFDIVTSTSNSFLP 1190

Query: 141  ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
                      +      +  +  +Y+I +N+  IL  IL   G+  +DKLN+  I+L   
Sbjct: 1191 VAEIIYTIHEIIQEFPVL--QERNYNIYLNHTAILKAILLYCGIP-EDKLNQVYIILYD- 1246

Query: 201  DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE------KSMHE 254
                         +  +             +L+S  +  +  F+    +       +   
Sbjct: 1247 ------------AVTEKLTRREVEAKFCNLSLSSNSLCRLYRFIEQKGDLQDLATTTNSI 1294

Query: 255  LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
            + +        + G  +L  +  L++K G     IK+  ++  GL Y     +  I  F 
Sbjct: 1295 IKQKTGVAQLVKHGMKDLEEVVGLLKKLG-----IKLQVSVNLGLFYKVQQHHGVIFQFV 1349

Query: 315  VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLESSTNNIK 373
               ++++ +V   +  GGRYD L+ +F+G         +IG+S  I  + +   +     
Sbjct: 1350 AFIKRRQKIVPEILAAGGRYDHLIPQFRGPQALGPVPSAIGVSIAIDKISAAVFNMEEPV 1409

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
             +    +  +     S+S+    TQ L TAGI AE+    S++     +Y          
Sbjct: 1410 TISSCDLLVVSVGQMSMSRAINITQKLWTAGIAAEIMYDWSQSQEELQEYCKHHEITYVA 1469

Query: 434  IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            +    E     +++K   K ++  +                 +P S+LV  + + L+  
Sbjct: 1470 LVSDKE--GNHVKVKSFEKERQTEKR----------------VPESDLVEHMAQKLRTK 1510


>gi|126649389|ref|ZP_01721630.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus sp.
           B14905]
 gi|126593714|gb|EAZ87637.1| ATP phosphoribosyltransferase regulatory subunit [Bacillus sp.
           B14905]
          Length = 385

 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 82/407 (20%), Positives = 156/407 (38%), Gaps = 49/407 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D   +       +  + ++     G++ I+TP +EY D++GK        + 
Sbjct: 2   FEKPLGMRDTFPQIFEKVEAVRQTGKDFLCKRGYEFIKTPAVEYFDTVGKASA---IADT 58

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D  G  + LR D+T P+AR         + P R      VFR ++   GR  +F
Sbjct: 59  HLFKLVDSQGNTLVLRPDMTTPIARVATSKLLKEMIPQRLAYFASVFRAQEVEGGRPAEF 118

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G  +  ADAE+ +   + L+ + +      I   +  IL+ IL+      + 
Sbjct: 119 DQMGIELIGDQSVFADAEVIVTAMELLKHLQLVAFKVTI--GHAGILNCILQDYTESIEQ 176

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +                     ++ LL +       +  +  NL   + D ++ F+   +
Sbjct: 177 QA-------------------TLRTLLVQRNYVGFEEAVESFNLPKAKADALLQFIEEAM 217

Query: 249 E-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           E K + ++ + V+   A        +     + +    ++ +    T+   + YYTG ++
Sbjct: 218 EVKDIRDIEQYVRKNDALV-----YMQQLAQLLEMADLADYVTFDFTLSSHMSYYTGMLF 272

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                   +G GGRYDGL+  F  +     G +    R+   L++L  
Sbjct: 273 EIFA----------LGSGFPLGNGGRYDGLLEVFGLK----AGATGFSIRVDRLLETLNG 318

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
            +   +E        +  + +      +    LR AG  A + L SS
Sbjct: 319 QSEGQQEAT-----VVLFEEEQFEAALLQVNTLRGAGKFATLQLRSS 360


>gi|58699012|ref|ZP_00373860.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
          ananassae]
 gi|58534476|gb|EAL58627.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
          ananassae]
          Length = 91

 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
          +  +  RG  D    E      I  +   I   YGF P +TP+ EY++   K L D  D 
Sbjct: 1  MTNQTVRGTKDFLFDEWYKFKHIEQTASRISNLYGFLPAQTPIFEYTEVFTKTLGDSSDI 60

Query: 66 PNKGVFSLQDDDGQWISLRYDLTAPLARYVA 96
            K ++S  D  G+ I+LR + TA + R + 
Sbjct: 61 ITKEMYSFNDKGGKSITLRPEFTAAIVRLLI 91


>gi|328876928|gb|EGG25291.1| putative protein serine/threonine kinase [Dictyostelium fasciculatum]
          Length = 1971

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 78/483 (16%), Positives = 156/483 (32%), Gaps = 50/483 (10%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
            ++ R R    +  I+  +G   ++TPLL   D   +                D+ G  + 
Sbjct: 1356 LKARERTFHRLSTIFRTHGAIQMDTPLLFPRDV--QSGAHGAVVA----RFLDEGGTVVH 1409

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L YDLT P AR+VA +  T        ++             +       V        +
Sbjct: 1410 LPYDLTVPWARHVALHGITQAKRFSFSKVFRRSSPGFSPKELYECDFDI-VGPSRVRHVS 1468

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +  ++             Y I +++  ILDG+L+  G+         + +      
Sbjct: 1469 DAELLRTVVDVMEGFSRELGTSYIIKVSHYSILDGVLQVCGVDQKLHGPVCMAIATLHW- 1527

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--KSMHELYELVK 260
              +     V   L E              L S  I+ +  +L    E    + +L EL+ 
Sbjct: 1528 --RNSWTQVAATLREI------------GLASPTINRLSIYLKQKSELLPGIAQLDELLA 1573

Query: 261  GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                   G  +L  ++  ++       +  +  ++V    YY G V++ +    +++   
Sbjct: 1574 KRKDSMAGLTDLRNLARNLQAINIIP-KFYLDLSLVHNYHYYDGMVFQVVNEKSIVDHHH 1632

Query: 321  KPVVFGSVGGGGRYDGLVSRFKGQ---------------------NVPATGFSIGISRLI 359
            +P     +  GGRYD L+  F+ Q                      +   G +I + +++
Sbjct: 1633 QPKT-EIIMAGGRYDKLIRSFQHQLHQQSSGGQPTQPNHSSNLKGQICGVGVTIAVEKIV 1691

Query: 360  VAL---KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             AL   +     +  +K+   +        +  L++       L +  IRA+        
Sbjct: 1692 TALLLYEERIGKSKGVKKATDIEAYVCSLGALMLTEKLQICAQLWSMSIRADYSQSDYIT 1751

Query: 417  FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                  Y  +      I+        G+L+++ +    E S   K+   +         I
Sbjct: 1752 VEEIYSYCKQNGVTWVIVLKERSYQNGLLKVRHIETRNEKSISRKDLVDYILKSRKHQGI 1811

Query: 477  PIS 479
            PI 
Sbjct: 1812 PID 1814


>gi|154500375|ref|ZP_02038413.1| hypothetical protein BACCAP_04042 [Bacteroides capillosus ATCC
           29799]
 gi|150270880|gb|EDM98163.1| hypothetical protein BACCAP_04042 [Bacteroides capillosus ATCC
           29799]
          Length = 389

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 77/425 (18%), Positives = 154/425 (36%), Gaps = 52/425 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E R R ++  ++  ++    +  I TP +E+ D   +       P + +
Sbjct: 7   TPEGTRDRLFAECRERRQVQRALTALFRRRSYAEIITPEVEFYDLFLQSG--NPLPQEAM 64

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
             + D  G+ + +R D T P+AR  A    T+  P R Y    VFR+     G   +  Q
Sbjct: 65  LKIIDRSGKIMVMRPDCTTPIARVAATKLRTVPLPQRLYYDQTVFRSGDAHRGGSSEIAQ 124

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
           C V+ +G++ + AD EM  +  D L+  G+    +H+ + +      +  ++ +      
Sbjct: 125 CGVELIGAAGKKADLEMVALAVDALKTAGL--EQFHVELGHVGFFRELTARVDMPAAAA- 181

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                             + ++ L+         D  +  N       +          +
Sbjct: 182 ------------------EQMRSLIEGKNFAALNDLLEPYNGQPAVRPLRRLPYLFGGAE 223

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E   L  G+       + L  +   ++ +GY  + I+    +V  ++YYTG V+   
Sbjct: 224 VLDEAETLSGGS----DALDYLRDLYGELKHAGYG-DHIRFDLGLVHQIDYYTGVVFRGY 278

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +               +V  GGRYD LV  F  +   ATGF++ +  +   L +   +  
Sbjct: 279 VE----------GAGDAVLSGGRYDKLVGAFG-RPAQATGFAVDVDAVAACLPAAVPTGL 327

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
            +          + +     +K      + R  G   E+     +   + L  A  +   
Sbjct: 328 EM---------LIHYGDGEFAKALAVLDV-REPG-SCELSPC--RALESTLSLAREKGAA 374

Query: 431 LAIIQ 435
           + ++ 
Sbjct: 375 VVLVL 379


>gi|37521959|ref|NP_925336.1| ATP phosphoribosyltransferase regulatory subunit [Gloeobacter
           violaceus PCC 7421]
 gi|46395713|sp|Q7NHZ4|HISZ_GLOVI RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|35212958|dbj|BAC90331.1| histidyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 392

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 75/405 (18%), Positives = 141/405 (34%), Gaps = 54/405 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P G  D    ++  +  I   ++ ++  +G+  I TP LE  ++L           +
Sbjct: 2   YQPPTGVRDLLPLDVSQKLWIEQRLQRVFTRWGYQRIITPTLERMETLQASGS---VDLQ 58

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +  L+D +G  + LR D T  LAR VA        P R      VFR       + ++F
Sbjct: 59  AILQLRDAEGVSLGLRPDPTPSLARAVATRLADAPLPVRLSYQMNVFR----STTQPQEF 114

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G+    ADAE+ +++A+ L  +     D+ + +         L ++      
Sbjct: 115 YQAGVELIGAGGVLADAEVLLVLAECLAELAP--PDWTLILGAVAFTRSWLAQVAEPARH 172

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L   +  L                        +       A +       ++    +  
Sbjct: 173 RLRRAMAEL------------------------DRVAILAEAGIDEAVRSQLLLLFDLRG 208

Query: 249 E-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           E + +      +  + A      EL  ++  +R     S  + +  ++V   +YYTG ++
Sbjct: 209 EPEMVLSKASSLPMSDAQRAELAELETLTGWLR---GRSVPVVLDLSLVEAFDYYTGLIF 265

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E   G  ++              GGRYD L+  +  +  P  GF++ +  L   L     
Sbjct: 266 EVSAGGRLIGR------------GGRYDHLLGSYG-KPAPGAGFALNLEALQQVLLPTGK 312

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFL 411
                          +    D+          LR A G R E+ L
Sbjct: 313 LPG---RTVGGGFLVVPDGPDAWEAALAEADKLRCAPGERVEIEL 354


>gi|323331297|gb|EGA72715.1| Hts1p [Saccharomyces cerevisiae AWRI796]
          Length = 407

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 102/427 (23%), Positives = 174/427 (40%), Gaps = 63/427 (14%)

Query: 100 DTIVFPCRTYRIGPVFRNEKH--GPGRFRQFIQCDVDNV-GSSAETADAEMCMMMADTLE 156
              +   + Y I  V+R ++     GR R+F QCD D      +   D+E   ++ + L 
Sbjct: 1   MNNIQSIKRYHIAKVYRRDQPAMTKGRMREFYQCDFDVAGTFESMVPDSECLSILVEGLT 60

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
           ++GIK  D+ I +N+RKILDGI +  G+  +D       +  A+DKLDK   + VK  + 
Sbjct: 61  SLGIK--DFKIKLNHRKILDGIFQIAGVKDED----VRKISSAVDKLDKSPWEAVKKEMT 114

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE----KSMHELYELVKGTIAGEKGFNEL 272
           E               + E  D +  ++ ++       ++      +      ++G +++
Sbjct: 115 EE-----------KGQSEETADKIGEYVKLNGSLKEIHAVLSADANITSNEKAKQGLDDI 163

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP---------- 322
             + +       +S  I    ++ RGL+YYTG +YE +       E              
Sbjct: 164 ATLMKYTEAFDIDS-FISFDLSLARGLDYYTGLIYEVVTSASAPPENASELKKKAKSAED 222

Query: 323 ----VVFGSVGGGGRYDGLVSRFKG------QNVPATGFSIGISRLIVALKSL-ESSTNN 371
               V  GS+  GGRYD LV+ F          +P  G S G+ R+   +K    SST  
Sbjct: 223 ASEFVGVGSIAAGGRYDNLVNMFSEASGKKSTQIPCVGISFGVERIFSLIKQRINSSTTI 282

Query: 372 IKEMGPVLITTMDHDSD---SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                 V +       D    L +    T+ L  AGI AE    +  N   Q   A++  
Sbjct: 283 KPTATQVFVMAFGGGKDWTGYLPERMKVTKQLWDAGIEAEYVYKAKANPRKQFDAAEKAG 342

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           C +A+I G  E   G L++K L  G+E + +                +  +++V  V++ 
Sbjct: 343 CHIAVILGKEEYLEGKLRVKRL--GQEFADDDGEL------------VSAADIVPIVQEK 388

Query: 489 LQENKEE 495
           L +  E+
Sbjct: 389 LSQIHED 395


>gi|68067127|ref|XP_675534.1| histidine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56494775|emb|CAH94198.1| histidine--tRNA ligase, putative [Plasmodium berghei]
          Length = 681

 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 5/166 (3%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      ++P+G  D   +++++RN   D I+N +  +G   I+TP+ E  ++L    
Sbjct: 520 MQKNINFNLKVPKGTKDFTGEDMQLRNIFFDFIKNKFLIHGGVEIDTPVFELKETLIDKY 579

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            ++   +K +F L+D  G+ +SLRYDLT PL R+   N    +                 
Sbjct: 580 GED---SKLIFDLKDQGGESLSLRYDLTVPLYRFFNTNNLNSLKRFHIG-KVYRRDEPSM 635

Query: 121 GPGRFRQFIQCDVDNVG-SSAETADAEMCMMMADTLEAVGIKRNDY 165
             GRFR+F QCD D VG      AD  +  +  D L  +     D+
Sbjct: 636 NKGRFREFYQCDFDIVGKYDIIKADFHILHIFWDILTNLKNVIGDF 681


>gi|315924859|ref|ZP_07921076.1| ATP phosphoribosyltransferase regulatory subunit [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315621758|gb|EFV01722.1| ATP phosphoribosyltransferase regulatory subunit [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 420

 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 68/404 (16%), Positives = 141/404 (34%), Gaps = 42/404 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
              GF +   +  R    I   ++ +Y++YG+  I  P  E  D     + D   P   +
Sbjct: 6   TIEGFENIQYQGFRSLAAIEARLKKLYQSYGYHQISIPTFESFDQF---ITDNTIPGDEL 62

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           F      G+ ++L+ D T  +AR  A N        + +    ++R+        ++  Q
Sbjct: 63  FKFISRKGKVLALKPDATLSVARMAAINHHDPGEIIKFFYQTNIYRHFAAPSDVKKEITQ 122

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+  G +A   D E+  +  ++L A GI   D  I + +   ++ +L+++ L   D+ 
Sbjct: 123 MGVEFFGDTAPECDGEIIALAIESLRANGIT--DIQIDMGHVGYINYLLDELALSESDRT 180

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE- 249
                               +  L+      +   F           +I++    +  + 
Sbjct: 181 -------------------ALISLIDNKNIGDIRAFLDARECNPTIAEIVLQLPRLYGKP 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K   E    +           +L  I   +   G  ++ +         + YY+  V++A
Sbjct: 222 KETFERMRTLCMNDKMRAVVADLQAIYRHLEAVG-LADAVTFDLGFTSAMHYYSDLVFKA 280

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +G               +  GGRYD L  +F   + PA GF++ +  L+  +       
Sbjct: 281 YVG----------GWGAPIIDGGRYDTLSRKFGI-DRPACGFAVDLLGLMDYMDQHGLLD 329

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           +  +         + +   +  +       LR  G+  E+F  +
Sbjct: 330 DAPEPHR-----VIVYTERAKPRAFALAADLRRQGLPVEIFCTA 368


>gi|153874706|ref|ZP_02002824.1| Histidyl-tRNA synthetase, class IIa [Beggiatoa sp. PS]
 gi|152068831|gb|EDN67177.1| Histidyl-tRNA synthetase, class IIa [Beggiatoa sp. PS]
          Length = 345

 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 79/394 (20%), Positives = 148/394 (37%), Gaps = 69/394 (17%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                R + IGP+FR+E    GR+RQF Q   +  G      DAE+ +M A   + +G+ 
Sbjct: 12  YNQTQRLWYIGPMFRHENPQRGRYRQFHQIGAEAYGLEGPDIDAEIILMTARFWQQLGLD 71

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
             +  I             +  ++   +  E+L      D   +     +++L  +    
Sbjct: 72  NFELQINSLGSAEARATYRQQLVNYFSEHWEQLD----EDSQRRLQTNPLRILDSKN--- 124

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
                        E    +V +L  + E    +L +L+                      
Sbjct: 125 ------SDLQSLIENAPQIVDYLDEESENHFTQLKKLLD--------------------- 157

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR- 340
                   +++S +VRGL+YY   V+E +          +    G+V  GGRYD LV + 
Sbjct: 158 --QTGVTYRVNSRLVRGLDYYNRTVFEWVTQ--------QLGTQGTVCAGGRYDSLVEQL 207

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
              +  PA GF++G+ RL++ L   +   + + +        M        +     + L
Sbjct: 208 GGKRPTPAIGFALGLERLVLLLAQRDLHKDKVPD----AYLIMVGGETVQRQGFSLAESL 263

Query: 401 RTA--GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           R     +R  +      +F +Q K AD+    +AI+ G  E ++  + +K L + ++   
Sbjct: 264 RDTLPKLR-LLTHCGGGSFKSQFKRADKSGAKIAIVLGEDEMAKQQVTLKYLREDRQ--- 319

Query: 459 EIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                         Q+ IP SELV+ ++ ++   
Sbjct: 320 --------------QVLIPQSELVNYLESVISYQ 339


>gi|254492014|ref|ZP_05105192.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Methylophaga thiooxidans DMS010]
 gi|224462829|gb|EEF79100.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Methylophaga thiooxydans DMS010]
          Length = 396

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 86/401 (21%), Positives = 146/401 (36%), Gaps = 45/401 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +   +E      +  S+ +   ++G+  +  PL+EY DSL              
Sbjct: 9   LPEGIDELMPEEASQLEILHRSLVDRMRSWGYQLVVPPLVEYLDSLLTGTAKTLDI--QT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T  +AR  A          R   IG V      G G+ R  I
Sbjct: 67  FKLTDQMSGRMLGIRADMTPQVARIAAHKLRHQSEILRLCYIGSVLHTLPEGQGKSRNPI 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   +D E   +M D L   G       + I +  I  G+    GL    +
Sbjct: 127 QLGAEIYGHAGPESDVESIELMVDLLNVTGAVS-TIALDIGHVGIYRGLAAYAGLTEFQE 185

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                        L +     ++ LL E + D+           +E++  +++ L+ D  
Sbjct: 186 Q-------ALFSALQRKAAAEIEALLVEYQLDS----------DAEKMLQILAELNGDRA 228

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                   L K   + ++  + L  I+E +      S  I      +RG  Y+TG V+ A
Sbjct: 229 VLQTARQHLQKAPASVQQALDTLEQIAEAL-AQRLPSLAINFDLAELRGYHYHTGVVFAA 287

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            +V  GGRYD +   F     PATGFS+ + +L   L + ++  
Sbjct: 288 YKQ----------GSAQAVAAGGRYDDIGEEFGHAQ-PATGFSMDLKKLATQLPATKAQP 336

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           +            +       +  Q   + LR AG +  ++
Sbjct: 337 D-----------VIGVTWQDDADLQKLVESLRQAG-KVVVY 365


>gi|76156306|gb|AAX27519.2| SJCHGC02629 protein [Schistosoma japonicum]
          Length = 118

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 3/103 (2%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           K   ++P+G  D    ++ I   + ++I   ++ +    I+TP+ E  + L     +E  
Sbjct: 12  KYNLKVPKGTRDRDPLQMTILEGVFNTIIQCFKRHDAVTIDTPVFELKEVLSGKYGEE-- 69

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
            +K ++ LQD  G+ +SLRYDLT P ARYVA +    +   + 
Sbjct: 70  -SKLIYDLQDQGGESLSLRYDLTVPFARYVAMHKIKSIKRYQI 111


>gi|212716935|ref|ZP_03325063.1| hypothetical protein BIFCAT_01879 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660220|gb|EEB20795.1| hypothetical protein BIFCAT_01879 [Bifidobacterium catenulatum DSM
           16992]
          Length = 361

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 104/382 (27%), Positives = 168/382 (43%), Gaps = 32/382 (8%)

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS--AETADAEMCMMMADTLEAVGIKR 162
           P + ++I  V+R E+   GRFR+F+Q D+D +G+    +  + E+ ++M   LE +    
Sbjct: 4   PFKRWQIQKVWRGERPQEGRFREFVQADIDVIGNGDLPDHYEVELPLVMVSALERLREFG 63

Query: 163 -NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR-- 219
                +  NNRK+ +G    +GL+  +       VLR IDKLDK G   V  LL EG   
Sbjct: 64  LPKATVHANNRKLSEGFYRGLGLNDIE------GVLREIDKLDKIGADEVAKLLVEGCGA 117

Query: 220 -TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D +    + A LT+     + S      EK   ++    +      +G + L +I + 
Sbjct: 118 DEDQARACLELAELTAADGAELSSKFDALCEKH--DIANDSEAYALARQGLDTLAMIVD- 174

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
              +      +     I RGL+YYTG VYE  L              GS+  GGRYD L 
Sbjct: 175 -EAARIRPGSVIADLKIARGLDYYTGSVYETFLDGAA--------SLGSICSGGRYDNLA 225

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           S+   +  P  G SIG+SRL+  +     +  N      VL+   +   ++ S   +   
Sbjct: 226 SQGS-KKYPGVGLSIGLSRLVSYMLHTAGAHANRVSPASVLVAVWN--EENRSASNLIAN 282

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            LR  GI A++   ++K  G Q+KYAD+   P               ++K++  G +   
Sbjct: 283 QLRARGIAADVAPTAAK-LGKQIKYADKLGIPYVWFPADESAQDASDEVKNIITGDQ--- 338

Query: 459 EIKNNESWREARV-AQITIPIS 479
           +  + +SW    V AQ T+ + 
Sbjct: 339 QPADAQSWEPDTVYAQQTVTVE 360


>gi|86608577|ref|YP_477339.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|109892453|sp|Q2JMG5|HISZ_SYNJB RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|86557119|gb|ABD02076.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 434

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 5/159 (3%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
              P G  D   +E++ R ++   +  ++  +G+  I TP LE  ++L           +
Sbjct: 34  LRPPSGARDLLPREVQRREKLEAQLTRVFRRHGYQRIITPTLERLETLLAGGS---IRAE 90

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRN--EKHGPGRFR 126
            V  L+D +G  + LR + TA + R  A        P R Y  G VFRN   + G    +
Sbjct: 91  SVLQLRDGEGTMLGLRPEFTASIVRAAATRLAGGPLPLRLYYHGSVFRNSRREEGSYSSQ 150

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
           +F Q  V+ +G+    ADAE+ +++AD + +VGI   ++
Sbjct: 151 EFFQSGVELIGAGGWLADAEILLLLADCIRSVGISSCEF 189


>gi|254446985|ref|ZP_05060452.1| tRNA synthetase, class II [gamma proteobacterium HTCC5015]
 gi|198263124|gb|EDY87402.1| tRNA synthetase, class II [gamma proteobacterium HTCC5015]
          Length = 398

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 88/409 (21%), Positives = 145/409 (35%), Gaps = 49/409 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKG 69
           LP+G  +   +       +   + ++Y ++G+D +  P +E+ +  LG    D D     
Sbjct: 9   LPQGIEEILPERALELESLRRQLLDLYHSWGYDLVMPPFIEFLESLLGDLGKDLDLK--- 65

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            F L D   G+ + LR D+T  +AR  A +      P R   +G V           R  
Sbjct: 66  TFKLTDQLSGRLMGLRADMTPQVARIDA-HVLNREEPTRLCYMGTVLHTRASEFAASRSP 124

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G S   +D E+  +M  TL   G+K  D+ + + +  I  G+ +  GL   D
Sbjct: 125 LQVGCELYGHSGAQSDVEVLRLMVATLRTAGVK--DFTVDLGHVGIFRGLAKAAGLSQRD 182

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +                     +   L          +  G  L+ EQ   + +   ++ 
Sbjct: 183 EA-------------------ELFDRLQRKSIPEIEQWLSGRGLSEEQHRHLAALAHLNG 223

Query: 249 EKSM--HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             S+      +L        +  + +  I+E ++    +   + I    +RG  Y TG V
Sbjct: 224 GLSVLSQARSQLAGAPQDVLEAIDTVADIAERLQALD-SEVPLHIDLAELRGYHYKTGAV 282

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           + A L          P     V  GGRYDG+   F  +  PATGFS         LK+L 
Sbjct: 283 FAAYL----------PGSGREVARGGRYDGIGEAFG-RARPATGFSTD-------LKALV 324

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMY-TQMLRTAGIRAEMFLGSS 414
             +    E     I           +        LR AG R    L   
Sbjct: 325 GVSCAAPERSQNAILAPAPSETQGDRALEAKVAELREAGERVIYQLEGD 373


>gi|146164789|ref|XP_001014072.2| histidyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|146145663|gb|EAR93827.2| histidyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 577

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 133/380 (35%), Gaps = 44/380 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE-DRPN 67
            +  +G  D    ++     I D    + E +G+  I   +LE+     + L D  +  N
Sbjct: 44  LQSVKGMKDLVGNQLLKHRFIFDCGAKVMEKHGYQMIVQNILEHKQVFSRTLGDTSEIIN 103

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           K ++   D  G+ + LR + TA + R++ EN        + Y  GP++R E+   GR RQ
Sbjct: 104 KEMYGFTDQSGKELVLRPEGTASVVRHILENSKHFEQQQKYYYYGPMYRYERPQLGRQRQ 163

Query: 128 FIQCDVDNVGSSAETADA----EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           F Q   + +             E+ ++    L+ V  K +++ + IN    ++  + K  
Sbjct: 164 FYQLGCEFLHKENPKNSYLIDAEIIIVAHKFLQRVLGKHSEFQMEINTIGDVEDRV-KYN 222

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               +   + +  L  + K+       +++   +   D   D    A   SE +      
Sbjct: 223 SILKEYYEKNIHKLSELSKMRLERNNPLRIFDSKEAQD--QDLIANAPQFSESMK----- 275

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                                 ++       + E++          KI+  +VRGL+YY+
Sbjct: 276 ----------------------QESKEYFRNLLEVLDSLN---ISYKINPLLVRGLDYYS 310

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +E        N  Q+     ++  GGRYD L S      +                +
Sbjct: 311 HTCFEI------KNVAQQGKSQDTILAGGRYDHLASVLNSNIISVCYQISIYYDYFNTRQ 364

Query: 364 SLESSTNNIKEMGPVLITTM 383
               +++        ++  +
Sbjct: 365 RKNRTSSKFSFFIQDILFNI 384


>gi|108803941|ref|YP_643878.1| ATP phosphoribosyltransferase regulatory subunit [Rubrobacter
           xylanophilus DSM 9941]
 gi|123177457|sp|Q1AX12|HISZ_RUBXD RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|108765184|gb|ABG04066.1| ATP phosphoribosyltransferase regulatory subunit [Rubrobacter
           xylanophilus DSM 9941]
          Length = 413

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 92/426 (21%), Positives = 159/426 (37%), Gaps = 53/426 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +     G  D    E      +   +   +  +GF  + TP LEY++ +     +E R  
Sbjct: 8   KFSTTPGTRDVLPPESTRLLDVQRRVLGRFRLHGFREVITPALEYAEVV-----EEARLR 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              F L D D Q + LR ++T P+AR V++       P +     PV+R  + G G+  +
Sbjct: 63  DSAFKLFDPDNQMLLLRPEMTTPIARLVSQRLRNAPPPFKLSYSLPVYRRSEVGRGQSAE 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLHG 186
           F Q  V+ VGS++   DA    ++ + LEA G+    D+ + +       G LE+     
Sbjct: 123 FHQAGVEVVGSASPGEDAGTIALLVEALEAAGLGPGEDFMVVLGQAAFYRGFLERSCPEV 182

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
              L      L A+   D   ++ +   L +                +     +   +  
Sbjct: 183 APAL------LSALAGKDLVRVEELSRRLPDA--------------VAAGARGIPRLVGP 222

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             + ++ E  E    +  G      L  I EL+   G     + +   ++   +YYTG V
Sbjct: 223 ASDGAVLEEAERY-ASGGGGAALENLRAILELLGAHGRLE-AVMLDLGLIGRHDYYTGAV 280

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           YE                  +V  GGRYD L+ RF  + +PATGF+I + RL+  L    
Sbjct: 281 YEVYAAGLGF----------TVANGGRYDNLLRRFG-EPLPATGFAISLERLVSVL---- 325

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                  E    L+  +  D    ++     + LR  G+   + +          +YA  
Sbjct: 326 -----PPERPAPLLVLVGED----AEAVRAARALRGEGVPV-LHVSGGLAPEEAERYARS 375

Query: 427 RNCPLA 432
            +    
Sbjct: 376 VDARWV 381


>gi|297743778|emb|CBI36661.3| unnamed protein product [Vitis vinifera]
          Length = 859

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 67/446 (15%), Positives = 146/446 (32%), Gaps = 23/446 (5%)

Query: 22  EIRIRNRILDSIRNIYENYGFDPIET-PLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
           +  +R+ + +  R ++ ++    +E  P+        + L D  +  +    L    G  
Sbjct: 393 DTELRDHVSEVTREVFRHHCAKRLEVVPI--------RLLDDCPQTIRNTVKLLTHGGDM 444

Query: 81  ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
           I L ++L  P   +V  N  +                   G     +++Q D D +G + 
Sbjct: 445 IELCHELRLPFVNWVITNQKSSFKRYEVSY----VYRRAIGHSAPNRYLQGDFDMIGGAT 500

Query: 141 ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
              +AE+  +  D +       N   I +N+  +L+ I   IG+  +    +   +L  +
Sbjct: 501 ALTEAEVIKVAMDIVTHF-FHSNSCGIHLNHGDLLEAIWSWIGIKAE-HRQKVAELLSMM 558

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
             L     +  + L               A     ++  +        ++++  L   + 
Sbjct: 559 SSLRPQSPE--RKLKWVVIRRQLQQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 616

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                 K  +EL  +   +R        + I + +     Y+    ++  L         
Sbjct: 617 ADKPTRKALDELADLFSYLRVWRI-EKHVFIDALMPPTESYHRDLFFQIYLMKENNPGSL 675

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV-ALKSLESSTNNIKEMGPVL 379
           K  V   +  GGRYD L+      +      ++G+S  +   ++         +    + 
Sbjct: 676 KEGVL--LAIGGRYDQLLREMCFASKSNPPGAVGVSLALETVIQHSSMDIRPFRNEVGIN 733

Query: 380 ITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           +          L +       L    I+AE    S  +   Q +YA+  +    +I    
Sbjct: 734 VLVCSRGGGGLLEERMELVAGLWEENIKAEFVPVSDPSLTEQYEYANEHDIKCLVIITDT 793

Query: 439 ERS-RGMLQIKDLAKGKELSREIKNN 463
             S    ++++ L   KE   E +N 
Sbjct: 794 GVSPTDFVKVRHLELKKEKEVERENL 819


>gi|332972945|gb|EGK10887.1| histidine synthesis ATP phosphoribosyltransferase [Desmospora sp.
           8437]
          Length = 388

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 84/408 (20%), Positives = 152/408 (37%), Gaps = 46/408 (11%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           + E P G  D P   +  +  +   +   +  +G+  + TP LEY D++G          
Sbjct: 6   QFEKPMGVRDFPPAFVSGKRWVEKQVEARFSAWGYREVMTPTLEYFDTVGTASA---IEE 62

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           + +F L D  GQ + LR D TAP+AR V+        P R      VFR+++   GR  +
Sbjct: 63  RKLFKLLDGQGQTLILRPDQTAPIARVVSSVLGGEPLPIRLSYHAGVFRSQEREAGRNAE 122

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F Q  V+ VG  +  ADAE+  +  + L+A G++  +  + + +  +L+ +L++     +
Sbjct: 123 FFQSGVELVGDGSPEADAEVVALAVECLQACGVR--NIRVALGHIGLLEALLQEEWADRE 180

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                               +  +K  LG        +  + + L  ++ + ++S LS+ 
Sbjct: 181 A-------------------VAELKKSLGRRNLVQFREKVRASGLPEQRQERLLSLLSLR 221

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            E+ + +                 L  I E +   G  S  + +  ++   L+YYTG  +
Sbjct: 222 GEREVLQRLRSESRGEESAAAAAHLEGIWEALEDWGVTS-HVMLDLSLTGSLDYYTGMYF 280

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E                   +  GGRYD L++ F                   ALK+   
Sbjct: 281 EGYGADGY-----------YLLSGGRYDRLMALFGRP----------APARGFALKTDRL 319

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
                          + +      +     Q LR  G R  +F+  S 
Sbjct: 320 VMACPPRPESREAVALVYPRRLHREACRQAQELRRRGNRVTLFIAESG 367


>gi|299536192|ref|ZP_07049505.1| ATP phosphoribosyltransferase regulatory subunit [Lysinibacillus
           fusiformis ZC1]
 gi|298728178|gb|EFI68740.1| ATP phosphoribosyltransferase regulatory subunit [Lysinibacillus
           fusiformis ZC1]
          Length = 390

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 84/410 (20%), Positives = 162/410 (39%), Gaps = 50/410 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           K+  E P G  D   +       +  + R+     G++ I+TP +EY D++GK       
Sbjct: 5   KM-FEKPLGMRDTFPQIYEKVEAVRHAGRDFLYKRGYEFIKTPAVEYFDTVGKASA---I 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  +F L D  G  + LR D+T P+AR         + P R      VFR ++   GR 
Sbjct: 61  ADAHLFKLVDSQGNTLVLRPDMTTPIARVATSKLLKEMIPLRLAYFASVFRAQEAEGGRP 120

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +F Q  ++ +G  +  ADAE+ +   + L+    K  ++ I I +  IL+ IL+     
Sbjct: 121 AEFDQMGIELIGDQSVFADAEVIVTAMELLKHF--KLEEFKITIGHAGILNCILQDYTES 178

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + ++                    ++ LL +       +  +  +L   + D ++ F+ 
Sbjct: 179 IEQQI-------------------TLRTLLVQRNYVGFEEAVESFDLPKAKSDALLQFIE 219

Query: 246 IDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             +  + + ++ + V+   A      E +     + +    ++ +    T+   + YYTG
Sbjct: 220 EAMNVRDIRDIEKYVRKNDAL-----EYMQQLAQLLEMADLADYVAFDFTLSSHMSYYTG 274

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++E                   +G GGRYDGL+  F  +     G +    R+   L++
Sbjct: 275 MLFEVFAV----------GSGFLLGNGGRYDGLLEVFGSK----VGATGFSIRVDRLLET 320

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           L   +   +E        +  + +      +  + LR AG  A + L SS
Sbjct: 321 LNGQSVKRQEAT-----VVLFEEEQFEAALLKVKNLRAAGKLATLQLRSS 365


>gi|323489385|ref|ZP_08094614.1| ATP phosphoribosyltransferase regulatory subunit [Planococcus
           donghaensis MPA1U2]
 gi|323396879|gb|EGA89696.1| ATP phosphoribosyltransferase regulatory subunit [Planococcus
           donghaensis MPA1U2]
          Length = 385

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 88/401 (21%), Positives = 160/401 (39%), Gaps = 47/401 (11%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E P G  D      + +  +  S  N+ +  G++ ++TP LEY +++GK    ED    
Sbjct: 6   FEKPLGMRDDFPFIAKKKAELRTSGTNMIQQAGYELLQTPTLEYYETIGKISAIEDNA-- 63

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F L D  G+ + LR D+T+P+AR  A        P R      VFR +K   GR  +F
Sbjct: 64  -LFKLLDSQGETLVLRPDMTSPIARVAASKLLKEKMPVRLGYYSNVFRAQKREGGRPAEF 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ +G  +  ADAE+ ++    L+ +          I + ++L  ILE  GL+ + 
Sbjct: 123 EQMGVELIGDDSLYADAEVIILAGTILKNLN--IESSRFVIGHTQLLQLILEDFGLNQEQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                              ++ V+       +       K   +   +++  +  +S   
Sbjct: 181 -------------------IEQVRSAFVSKNSVGFETLAKQLPIEESRVESFIGLISTTT 221

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +   +         +    F E+  + +++ +SG  S  +    +    + YYTG V+E
Sbjct: 222 VEEWQQWVNPHNSKQSFL--FEEMKKLKKILDRSG-LSEAVTYDLSFNSHMTYYTGVVFE 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                              +G GGRYDGL+ +F    V ATGF + + RL+  + ++   
Sbjct: 279 VYAA----------GSGFPLGNGGRYDGLMKQFG-LEVGATGFGLRVDRLLEIMSAVSEQ 327

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
            ++         T +  D  +  +     + LR  G R  +
Sbjct: 328 QDH---------TLILFDEQNEEQAFDEAEKLRANGTRVTL 359


>gi|88704491|ref|ZP_01102205.1| ATP phosphoribosyltransferase regulatory subunit [Congregibacter
           litoralis KT71]
 gi|88701542|gb|EAQ98647.1| ATP phosphoribosyltransferase regulatory subunit [Congregibacter
           litoralis KT71]
          Length = 403

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 75/417 (17%), Positives = 146/417 (35%), Gaps = 49/417 (11%)

Query: 1   MGKKTKLRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M K++ +RA +LP G  +   +       +  ++ +    +G+  +  P++E++DSL   
Sbjct: 1   MEKQSPIRAWQLPDGIDELLPEAAAQVEALRRTLLDCASRWGYRLVTPPMVEFTDSLLVG 60

Query: 60  LPDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           + ++       F + D   G+ +  R D+T  +AR  A +        R    G      
Sbjct: 61  VGEDLDL--LTFKVPDQVTGRMLGFRADMTPQVARMDA-HSLHGDQVNRLCYAGSTLHTR 117

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
                  R  +Q   +  G+   +AD E+  +M   L+  G+K +           +   
Sbjct: 118 SESLAASRSPLQLGAELYGARGLSADIEVVALMLSMLDVAGVKISQTLTLDLGHGDIFK- 176

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
                +       E  I     D L +     ++ LL              A L      
Sbjct: 177 ----HVLAASGAVEAGIESEVFDALQRKSRPDLERLL--------------APLPEASRA 218

Query: 239 IMVSFLSIDLEKSMHEL--YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
            ++S + +  + ++ +    EL            EL  +S  ++   Y    + I    +
Sbjct: 219 GLLSLMDMHGDLTVLDRAEAELGSAVPEIRDSLRELRELSSALQAR-YPDVSLYIDLAEL 277

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           RG  Y+TG V+ A              +  ++  GGRYD +   +  ++ PATGF+  + 
Sbjct: 278 RGYRYHTGVVFAAYTQ----------GLGEALARGGRYDNVGEVYG-RSRPATGFATDLK 326

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
            L   L+                I   D +  +L +     + LR+ G    +    
Sbjct: 327 LLAAQLQQEN--------TPQDAIAAPDKEDPALQEA---VKKLRSQGETVIVVFDG 372


>gi|307824086|ref|ZP_07654313.1| histidyl-tRNA synthetase 2 [Methylobacter tundripaludum SV96]
 gi|307734870|gb|EFO05720.1| histidyl-tRNA synthetase 2 [Methylobacter tundripaludum SV96]
          Length = 411

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 144/400 (36%), Gaps = 48/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +   +E +    +   I + +  +G++ +  P ++Y DSL      +       
Sbjct: 21  LPDGIEEILPEEAKHLESLRRKILDTFACWGYELVIPPFIDYLDSLLTGSGHDLEL--QT 78

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T  +AR  A +     +P R    G +   +     + R  +
Sbjct: 79  FKLTDQISGEMLGVRADMTPQVARIDA-HNLNAEWPTRLCYTGTILHTKGDPLEKTRSPM 137

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G + + +D E+  +M + L   G++  + H+ + +  I   + ++ GL    +
Sbjct: 138 QIGAELYGHAGKESDVEVIRLMLEMLAMSGLQ--NVHLDLGHVGIYRALSKQAGLDDAQE 195

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +  +L         +   G ++  E   + +    ++  
Sbjct: 196 A-------------------ELFDVLQRKARPELQELMAGYSINDELKTMFLKLPQLNGG 236

Query: 250 KSMHELYE--LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           K         L       ++   +L  I++ +    + S  I      +RG  Y+TG V+
Sbjct: 237 KETIAKARAVLATANGEVKEALADLEAIADKL-AISFPSLPISFDLAELRGYHYHTGVVF 295

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A +                +  GGRYD + + F          + G S  +  L +L  
Sbjct: 296 AAFVPSVG----------REIARGGRYDNIGAIF-----GRARAATGFSADLKVLSALGK 340

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           ++   ++    LI     D  +L +     + LR  G+  
Sbjct: 341 ASYKKQQQA--LIFAPYGDDTALHEKI---RDLRAEGLAV 375


>gi|284044986|ref|YP_003395326.1| histidyl-tRNA synthetase 2 [Conexibacter woesei DSM 14684]
 gi|283949207|gb|ADB51951.1| histidyl-tRNA synthetase 2 [Conexibacter woesei DSM 14684]
          Length = 346

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 90/361 (24%), Positives = 162/361 (44%), Gaps = 41/361 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   +P G  D    E+R    IL +   ++++ G+  + TP LEY D+L         P
Sbjct: 1   MIHPIPSGTRDVLPDEMRELRAILAAAHRVFDDAGYGEVATPALEYEDTLAIGGVGGTLP 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
               + L D+ G  ++LR D+T P+AR VA  F T   P R   +   +R  K   G+ R
Sbjct: 61  A---YRLFDEQGNVLTLRSDMTVPIARLVATRFATAEPPLRLCYVAHAYRGVKPQRGQSR 117

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F+Q  ++ +G+ A +  AE   ++ DTL+AVG++   Y IG+ +  +   +L+  G+ G
Sbjct: 118 EFLQAGIELIGAPAPSGTAEALTLLCDTLDAVGLRS--YRIGLGDVALYQALLDGHGVAG 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + +        R + +L      G++  +   R  ++           +Q+  +      
Sbjct: 176 EGRE-------RILHELVTRDFVGLEREVDALRLTDAHAV--------QQLKRIPQLRG- 219

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              + + +L         G +G +EL+            + R+     +VR L YYTG +
Sbjct: 220 -GPELLAQLDGAAAEAAEGLRGVHELLEP--------RVAERVIFDLGLVRDLGYYTGAI 270

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           ++                   +GGGGRYD L+ RF  + +PA G+++ + RL +AL   E
Sbjct: 271 FQVYDPKLGA----------PLGGGGRYDDLIGRFG-RPLPAVGWALNVERLHIALAGEE 319

Query: 367 S 367
           +
Sbjct: 320 A 320


>gi|320163177|gb|EFW40076.1| histidyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 553

 Score =  114 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 74/338 (21%), Positives = 130/338 (38%), Gaps = 34/338 (10%)

Query: 41  GFDPIETPLLEYSDSLGKFLP-DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF 99
           GF  +ETP++E      + +  D     K +++  D DG  + LR + TA + R V +  
Sbjct: 51  GFGEVETPIVEQESLFKRSIGADSSVVMKEMYAFDDPDGGRLCLRPEGTAGVMRAVLQRL 110

Query: 100 DTIVF-------PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
                              GP+FR EK   GR+RQF+QC V+ +GS+   AD  +     
Sbjct: 111 AAEPTPSINADVHASLCYTGPMFRREKPQAGRYRQFLQCGVEYLGSAGVDADGLVLYAAW 170

Query: 153 DTLEAVGIKR------NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
             +  +G+        N         + +  + + +    ++   E L  LR    +   
Sbjct: 171 RLIRELGLSSQVVLQLNTLGTSAERYRYVQALRDYLEPRANELSGESLSRLRGRTPVVAT 230

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT--IA 264
           G   ++       T ++ + T         +D          + ++ E   L+      +
Sbjct: 231 GSDELRQEAAGASTTSAAEDTGIVGRVLRILDS-----KHAQDHAVLEAAPLLSDFLDPS 285

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
               F EL    E +      +    ++  +VRGL+YY+  V+E +              
Sbjct: 286 THARFAELKETLEAL------AIPFTVNPRLVRGLDYYSHTVFEIVAN------SGVLGA 333

Query: 325 FGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIVA 361
             +V  GGRYD L       + VPA G++ G+ RL +A
Sbjct: 334 QSTVLAGGRYDELSLVLGGKRKVPAVGWAAGVERLSLA 371



 Score = 36.7 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 21/49 (42%)

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            G+QL+ A R      ++    + + G   ++ LA   + S  + +  +
Sbjct: 498 LGDQLRAAARHGLEHVVLLYPDQAATGTAVVRHLASAHQQSVSLTSLAT 546


>gi|225629715|ref|ZP_03787680.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
          uniraptor]
 gi|225591432|gb|EEH12507.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
          uniraptor]
          Length = 92

 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
          +  +  RG  D    E      I  +   I   YGF P +TP+ EY++   K L D  D 
Sbjct: 1  MTNQTVRGTKDLLFDEWYKFKYIQQTANRISSLYGFLPAQTPIFEYTEVFTKTLGDRSDI 60

Query: 66 PNKGVFSLQDDDGQWISLRYDLTAPLARYVAE 97
            K ++S  D  G+ I+LR + TA + R + E
Sbjct: 61 ITKEMYSFNDKGGKSITLRPEFTAAIVRLLIE 92


>gi|237745520|ref|ZP_04576000.1| ATP phosphoribosyltransferase regulatory subunit [Oxalobacter
           formigenes HOxBLS]
 gi|229376871|gb|EEO26962.1| ATP phosphoribosyltransferase regulatory subunit [Oxalobacter
           formigenes HOxBLS]
          Length = 387

 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 78/402 (19%), Positives = 149/402 (37%), Gaps = 56/402 (13%)

Query: 17  DCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD 76
           D    E R    +   I + + +YG++ +  P+LEY +SL   +  +       F L D 
Sbjct: 12  DVLPSEARKMEDLRRKILDEFRSYGYELVIPPMLEYLESLLTGVGQDTEI--YTFKLIDQ 69

Query: 77  -DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
             G+ + +R D+T  +AR  A +        R    G +      G    R+ +Q   + 
Sbjct: 70  LSGRTMGIRADMTTQVARIDA-HLLNRNTVTRLCYAGSILHTRPSGLQATREPLQIGAEI 128

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
            G     ADAE+  +   +L+A GI      + +++  +L  ++                
Sbjct: 129 FGYPGIEADAEIQSLALASLKAAGISG--VCLDLSHVGVLKALI---------------- 170

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHE 254
              A D L +     +  LL         + T       +    +++  S+  + + + E
Sbjct: 171 ---ASDPLAQIFEAQLFDLLETKDMPGLIELT--KGFHEDTRTALLALPSMYGDVEILKE 225

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             +++  T    K   EL  ++          +R+ I    + G  Y++G ++ A +   
Sbjct: 226 AKKILPDTEGIAKALAELEYLAGQAEC-----DRVTIDLADMHGYHYHSGVMFAAYV--- 277

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
                  P +  ++  GGRYD +   F  ++ PATGFS+ +  L   L + E        
Sbjct: 278 -------PGLPNAIARGGRYDHVAEAFG-RSRPATGFSMDLRELARVLPAAEKRH----- 324

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                   +   SD     +     LR +G      L +S++
Sbjct: 325 ------VILAPWSDDEKLCRKI-GELRQSGEIVVYELPNSRS 359


>gi|297740935|emb|CBI31247.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 75/359 (20%), Positives = 143/359 (39%), Gaps = 50/359 (13%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +              + +      +  N++ + +N+RK+LDG+L+  G+  +    +   
Sbjct: 1   MIFKNMVQYLFKKFTILEYGLVCALTSNNFVVKLNHRKLLDGMLDICGVPPE----KFRT 56

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-----K 250
           +  +IDKLDK   + +K  + E              LT E  + + +F+           
Sbjct: 57  ICSSIDKLDKQTFEQIKREMVEE-----------KGLTIETAEKIGTFVKERGPPLELLS 105

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + +      G  A      +L ++   + KS    N++    ++ RGL+YYTG ++EA+
Sbjct: 106 KLKQEGSEFLGNNASVAALTDLEILFTALEKSKC-INKVVFDLSLARGLDYYTGVIFEAV 164

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                          GS+  GGRYD L+  F  + VPA G S+GI R+   ++ L+   N
Sbjct: 165 FKGAT--------QVGSIAAGGRYDNLIGMFGTKQVPAVGTSLGIERVFNIMEQLQKDQN 216

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +      +D LS+       L  A ++AE     +K        A+    P
Sbjct: 217 QAIRATETQVLVSIFGND-LSQAAELVSELWNAKLKAE--YMVNKRPTKHFDRAEESRIP 273

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
             I+ G  E++ G+++++D    +E+                   +P S +V  +++ L
Sbjct: 274 WMILVGEREQNEGIVRLRDTTTREEI------------------LVPRSRIVEELQRRL 314


>gi|209527721|ref|ZP_03276217.1| histidyl-tRNA synthetase 2 [Arthrospira maxima CS-328]
 gi|209491842|gb|EDZ92201.1| histidyl-tRNA synthetase 2 [Arthrospira maxima CS-328]
          Length = 411

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 71/401 (17%), Positives = 147/401 (36%), Gaps = 38/401 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  + P G  D    ++  +  I   ++ ++  +G+  I T  LE  D+L          
Sbjct: 1   MIHQPPPGARDLLPLDVAQKIWIERRLQQVFHGWGYHRIITSTLERLDTLMAGGA---VQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFR-NEKHGPGR 124
              V  LQD + + + LR +LTA +AR           +P R Y    +FR   + G G 
Sbjct: 58  RSTVIQLQDTENEGLGLRPELTASIARAAVSRMAGNDHWPQRLYYNANIFRKGGETGHGT 117

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             +F Q  V+ +G+    AD+E+ +++ D L ++ ++   + +G     +   +L     
Sbjct: 118 QLEFYQAGVELLGADGVRADSEVLLLLWDCLRSLNLQNPQFILGEA--GLTRSLLSPFPP 175

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D++ + +  L  I          ++          +           + +  +    
Sbjct: 176 PLRDQVRQAIANLDRITLETLSMSPELRQ--------RALFLFDLRGRPEDVLAKVSQLD 227

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
               ++S     + +   +             + +R    +   I +  ++++  +YYTG
Sbjct: 228 LDHSQRSALNNLKSLIDGL----------NQYQKLRPDTLSPMSITLDLSLIQTFDYYTG 277

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVAL 362
            V+  +                 +G GGRYD L  +   +G+  P+ GFS+ I  L   L
Sbjct: 278 IVFIVV--------SDSHSGSRVLGRGGRYDQLLGLYHPQGETKPSIGFSLTIEELHQVL 329

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
             +    ++I          +     + +    Y Q LR +
Sbjct: 330 LDMGELPSDIPSGDC---LVVPKTPQAEAAAFAYAQDLRQS 367


>gi|213581534|ref|ZP_03363360.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 192

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 17/203 (8%)

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
                  + +L+  +G       ++  +VRGL+YY   V+E +               G+
Sbjct: 1   SREHFAGLCKLLDAAG---IAYTVNQRLVRGLDYYNRTVFEWVTNS--------LGSQGT 49

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V  GGRYDGLV +  G+  PA GF++G+ RL++ ++++            V I  +   +
Sbjct: 50  VCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVN---PEFIASPVVDIYLVAAGA 106

Query: 388 DSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
            + S      + LR    G++     G   NF  Q   AD+    +A++ G  E + G +
Sbjct: 107 QTQSAAMTLAERLRDEMPGVKLMTNHGGG-NFKKQFARADKWGARIALVLGESEVADGTV 165

Query: 446 QIKDLAKGKELSREIKNNESWRE 468
            +KDL  G++ +    +  +   
Sbjct: 166 VVKDLRSGEQTAVAQDSVAAHLR 188


>gi|237747718|ref|ZP_04578198.1| ATP phosphoribosyltransferase regulatory subunit [Oxalobacter
           formigenes OXCC13]
 gi|229379080|gb|EEO29171.1| ATP phosphoribosyltransferase regulatory subunit [Oxalobacter
           formigenes OXCC13]
          Length = 388

 Score =  113 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 78/402 (19%), Positives = 142/402 (35%), Gaps = 56/402 (13%)

Query: 17  DCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD 76
           D    E R    I   + + + +YG++ +  P+LEY +SL   +  +       F L D 
Sbjct: 12  DVLPAEARKMEEIRRKVLDAFRSYGYELVVPPMLEYLESLLTGVGQDTEI--YTFKLIDQ 69

Query: 77  -DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
             G+ + +R D+T  +AR  A +        R    G +      G    R+ +Q   + 
Sbjct: 70  LSGRTMGIRADMTTQVARIDA-HLLNRNAVTRLCYAGSILHTRPSGLQGTREPLQIGAEI 128

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
            G     ADAE+  +   +L+A  I                       +  D      L 
Sbjct: 129 FGYPGIEADAEIQDLALTSLKAANITG---------------------VCLDLSHVGVLK 167

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHE 254
            L A D L +     +  LL         + T       +  + +++   +  +   + E
Sbjct: 168 SLIAADPLAQIFEAQLFDLLETKDMPGLTELT--KGFHEDTRNALLALPDMYGDINVLKE 225

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             +++      EK  NEL  +         +  R+ I    + G  Y++G ++ A +   
Sbjct: 226 ARKVLPENGGIEKALNELEFL-----AGQADCGRVTIDLADMHGYHYHSGVMFAAYV--- 277

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
                  P +  ++  GGRYD +   F  ++ PATGFS+ +  L   L + E     +  
Sbjct: 278 -------PGLPNALARGGRYDHVAEAFG-RSRPATGFSMDLRELARLLPAPEKRRAILAP 329

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                            K +   + LR +G      L  +K+
Sbjct: 330 WNND------------EKCRQAIRELRKSGELVVFELPGAKS 359


>gi|326791574|ref|YP_004309395.1| histidyl-tRNA synthetase 2 [Clostridium lentocellum DSM 5427]
 gi|326542338|gb|ADZ84197.1| histidyl-tRNA synthetase 2 [Clostridium lentocellum DSM 5427]
          Length = 422

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 70/404 (17%), Positives = 148/404 (36%), Gaps = 40/404 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G  D   +E  ++ +I D ++ ++E Y +  +ETP  EY +            +  +
Sbjct: 8   IPEGVKDYTGEEAALKGKIQDQVKKVFEGYSYHWVETPTFEYLNVFT--TEKAGFQSPSL 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   +  G+ ++LR D+T  +AR +       + P R   +   FR  +   G+  +F Q
Sbjct: 66  YKFVNRQGEMLALRSDMTRAIARVIGMQKAESMMPKRYAYMTNSFRYPERYQGKLHEFTQ 125

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+ +G ++  ADAE+  +    L+ VG+   D+ + I + + L   L  +GL  +   
Sbjct: 126 AGVELIGKNSIEADAEVIKLAITALKKVGVT--DFTVHIGSSQFLKCTLSDLGLGEEA-- 181

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                            ++ V   + +       D  + A    E + +++  +      
Sbjct: 182 -----------------VEKVYEAIDQKNAVLLKDVLQEAIKDEETLALLLELIECAGHI 224

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +    +    +    K  +E+  + EL+   G  S  I  + +++    YYTG +++  
Sbjct: 225 DLLRSVKKKMNSPQAVKALDEMEQLYELLEDYGV-SESILFNFSLLSYGNYYTGMMFQVF 283

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                      P +  ++  GGRYD L+  F                +   L+ L     
Sbjct: 284 T----------PYIGTAIVEGGRYDHLLEEFGK----GLPAVGFGMHMNAILQRLIKQKP 329

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
                    +   +    +       +   R +G+  E     +
Sbjct: 330 LTPLYSKCTLVVANKQ--TRKICYEVSDHHRESGMVIENSFTDN 371


>gi|307069604|ref|YP_003878081.1| histidyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
 gi|306482864|gb|ADM89735.1| histidyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
          Length = 431

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 94/451 (20%), Positives = 165/451 (36%), Gaps = 53/451 (11%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL-P 61
           K  KL  +  +G  D      +I N I+  I+ I   Y    ++TP+LEY+      L  
Sbjct: 2   KINKLYIKKIKGTYDILPNNFKIINLIIKKIKFIINKYRLKQVDTPILEYTKLYKIILKK 61

Query: 62  DEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEK 119
           D++  N  +FS +D  +   +SL+ + T+ + R + EN   I     + +    +FR+EK
Sbjct: 62  DKEITNNQIFSFKDKLNNNKLSLKPENTSGIIRLILENKLLIKNNYQKLWYFSNIFRHEK 121

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
               R+RQF Q  ++    +   +D E+  +  D  + + +                  L
Sbjct: 122 PQKWRYRQFFQLGIEIFKFNKFKSDIELLKISYDIFKKLKLIS-------------KIFL 168

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E   +    +  +    LR            ++L           D     N   ++I  
Sbjct: 169 EINFIGNLKERYKYTKKLRYFFSKFILKFNKIELNKFYYNPLKILDNNFYTNKILKKIPK 228

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +L                           L     ++R         KI+  ++RGL
Sbjct: 229 IFKYLKKKS-----------------------LNKFKNIIRDLKIYQIPYKINPYLIRGL 265

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            YY   ++E          K K   F S+ GGGRYD  + +   + + A G SIGI RLI
Sbjct: 266 SYYNNLIFEW---------KIKKKSFISICGGGRYD-YLFKNINKKIKAGGLSIGIERLI 315

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +  K    +    K    + I  +  ++       + +++LR    +  +   + KN  N
Sbjct: 316 LLFKKYNKNIFKFK----LNIYIICINNKFKFYCYILSEILRNLNFKIILNFVNKKNINN 371

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
            +K +        I  G  E     + IK L
Sbjct: 372 LIKNSILFKSNFIIFIGKKEIYNSFITIKKL 402


>gi|70936309|ref|XP_739117.1| histidine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56515871|emb|CAH75561.1| histidine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 433

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 7/152 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      ++P+G  D   +++++RN     I+N +  +G   I+TP+ E  ++L    
Sbjct: 283 MQKNVNFNLKVPKGTKDFTGEDMQLRNVFFQFIKNKFLIHGGVEIDTPVFELKETLIDKY 342

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR----TYRIGPVFR 116
            ++   +K +F L+D  G+ +SLRYDLT PL R+   N    +          R  P   
Sbjct: 343 GED---SKLIFDLKDQGGESLSLRYDLTVPLYRFFNTNNLNTLKRFHIGKVYRRDEPSMN 399

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
             +        F      +   +         
Sbjct: 400 RGRFREFYQCDFDIVGKYDTLKADFHILHIFW 431


>gi|297565196|ref|YP_003684168.1| Histidine--tRNA ligase [Meiothermus silvanus DSM 9946]
 gi|296849645|gb|ADH62660.1| Histidine--tRNA ligase [Meiothermus silvanus DSM 9946]
          Length = 386

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 84/436 (19%), Positives = 156/436 (35%), Gaps = 57/436 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G       E R+R  +   + +++  +G++ +E P LE  D             +  
Sbjct: 2   IPEGTRYYLPPEARLRRELAGRLIDLFHGWGYELVELPALERYDP-------RHVLAERS 54

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF-RQFI 129
           F L D  G  ++LR D T+ LA  V E F    +P R    G V+  E        R++ 
Sbjct: 55  FKLVDKTGDVLALRSDFTSALANLV-EAFPPERYPARYQYAGQVWLREADAELGRVREYT 113

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+ VG S+  AD E+  +  + L+A+G       +      ++  +LE         
Sbjct: 114 QFGVELVGVSSPQADTEILELAWEALQALGFAEAKIEV--GLPSLVRDLLES-------- 163

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                        L  F ++ ++  +              A         +++   +   
Sbjct: 164 -----------TGLQPFQIETLRQAIHRKNIPELSSLL-EAYRVESLAPTILALPDLYGG 211

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +      +  T   +   + L     L+         + +     R L+YYTG  ++A
Sbjct: 212 LEVLNEARKLSLTEKAQADLDWLEASLALL-----PEVPLLLDLGRARRLDYYTGINFQA 266

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL--KSLES 367
                 +           + GGGRYDG +         A GF++G+ R++ AL       
Sbjct: 267 YTQDFGL----------PLLGGGRYDGTLL------PQACGFTVGLERVMEALFSPRSGV 310

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
           + ++ +    + + +     D L+  +   + LR  G R E+         +   YA  R
Sbjct: 311 ALSSPRSGAALRLPSEADVPDVLAVDRAMARQLRAEGQRVELAWTDD--LASLRHYARSR 368

Query: 428 NCPLAIIQGT-GERSR 442
             PL  ++G   E + 
Sbjct: 369 GIPLIAVEGRLEEIAS 384


>gi|291297203|ref|YP_003508601.1| histidyl-tRNA synthetase 2 [Meiothermus ruber DSM 1279]
 gi|290472162|gb|ADD29581.1| histidyl-tRNA synthetase 2 [Meiothermus ruber DSM 1279]
          Length = 368

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 149/429 (34%), Gaps = 71/429 (16%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G       E R+R  + + + N+  ++G++P+E P LE  D        +    +  
Sbjct: 2   IPEGTRYFLPPEARLRRELQERLANLLYSWGYEPVELPALELYDP-------QHALAERA 54

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGP-GRFRQF 128
           F L D  G+ ++LR + T  +A  +  N       P R    G ++  E +   GR R+F
Sbjct: 55  FKLVDKTGEVLALRSEFTTAVAGLLRSNGRLATGQPVRLQYAGSLWLREANAELGRSREF 114

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   + VG S+  ADAE+  +    L+ VG       +      ++  +L+  GL G+ 
Sbjct: 115 SQVGAELVGVSSPRADAEVLELAWACLQLVGFAEAKIEV--GLPALVRDLLDATGLSGEQ 172

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           K                   + ++  +    +       K   +     D +++   +  
Sbjct: 173 K-------------------ERLRQAIHRKNSPELEALLKEYRVHPGLQDALLALPDLYG 213

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +      +  +   +   + L  +  L+         + +     R L +YTG  ++
Sbjct: 214 GREVLAEARRLPLSDKAQADLDWLEAVLALL-----PEVPLLLDLGRARLLNFYTGLNFQ 268

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A      +           + GGGRYDG +  +          +     L   +++L   
Sbjct: 269 AYTPDFGL----------PLLGGGRYDGALLPY---------AAGFALGLERVMEALRLP 309

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS-KNFGNQLKYADRR 427
            +                 + L+  +     LR  G R E+    + +      +YA  +
Sbjct: 310 LSEPPP-------------EVLALDRALAHQLRAEGKRVELAWTDNLRELK---EYALEK 353

Query: 428 NCPLAIIQG 436
                 + G
Sbjct: 354 GIGWLAVDG 362


>gi|226325120|ref|ZP_03800638.1| hypothetical protein COPCOM_02912 [Coprococcus comes ATCC 27758]
 gi|225206468|gb|EEG88822.1| hypothetical protein COPCOM_02912 [Coprococcus comes ATCC 27758]
          Length = 238

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 4/179 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D   +E   +  + + +      YG+  I+TP+ EY D   K +     P++ +
Sbjct: 7   TPEGVRDIYHEECAKKLALQNRLHKTLHLYGYHDIQTPMYEYFDVFRKEIG--TIPSREL 64

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D DG  + LR D+T  +AR  A  F    FP R   +G  F N     GR ++  Q
Sbjct: 65  YKFFDRDGNTLVLRPDITPQIARATATLFKDDEFPARLCYVGNTFINHSSYQGRLKESTQ 124

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
              + +G  A  ADAEM  ++ D L+  G+   ++ I I N      ++E+  +  + +
Sbjct: 125 MGAEMIGLDAADADAEMLALVIDCLKNAGL--EEFQISIGNVDFFQSLIEESEIDDETE 181


>gi|30249261|ref|NP_841331.1| ATP phosphoribosyltransferase regulatory subunit [Nitrosomonas
           europaea ATCC 19718]
 gi|46395777|sp|Q82V28|HISZ_NITEU RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|30180580|emb|CAD85193.1| ATP phosphoribosyltransferase regulatory subunit [Nitrosomonas
           europaea ATCC 19718]
          Length = 391

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 76/402 (18%), Positives = 139/402 (34%), Gaps = 46/402 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D   ++     +I   I ++   +G+  +  PLLEY +SL             +
Sbjct: 6   LPEYIEDVLPRDAYRIEKIRRLIMDMLFAHGYQFVMPPLLEYVESLLAGSGSGMNLR--M 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + LR D+T   AR  A +   I    R      V         R R+  
Sbjct: 64  FKVVDQLSGRMMGLRADMTPQAARIDA-HLLNISGVTRLCYASSVVHTVPDEITRTREPF 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G S   +D E+  ++ + L   GI     H+ + + ++   ++   G+  +  
Sbjct: 123 QVGAELYGHSGIESDLEIQCLLLECLSVSGIHS--IHLDLGHIRVFRSLIRDSGIKPE-- 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             E  +      K      + V+  L +               + +   +++  L  D  
Sbjct: 179 -FEMELYAALWAKDISSLKELVRTGLNKR-----------LTRSVQNALLLLPELYGDGT 226

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +    + +       +  ++L  ++ +++      +RI      +RG  Y+TG V+  
Sbjct: 227 -VLLSARQHLPDFPEIGEALDQLEHVARILQ---PYVDRITFDLADLRGYHYHTGMVFAV 282

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                       P     +  GGRYD +   F  +  PATGFS+        LK L   T
Sbjct: 283 YT----------PGCPAPIALGGRYDEIGKSFG-RARPATGFSLD-------LKQLSQLT 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           +       +L      D    +      + LR  G      L
Sbjct: 325 DMNGYPSGILAPWKPEDEKLAA----MVRQLRAEGHIVVTEL 362


>gi|83648037|ref|YP_436472.1| ATP phosphoribosyltransferase [Hahella chejuensis KCTC 2396]
 gi|83636080|gb|ABC32047.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
           [Hahella chejuensis KCTC 2396]
          Length = 407

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 81/404 (20%), Positives = 145/404 (35%), Gaps = 48/404 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E      +   + ++Y ++G++ I  PLLE+ DSL   +  +      +
Sbjct: 16  LPDGVEELLPPEATRIEELRRQLLDLYHSWGYEMIVPPLLEFLDSLLIGVGRDLEL--EM 73

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR   ++  +     R   IG V R +       R  I
Sbjct: 74  FKVTDQLTGRLMGIRADMTPQVAR--IDSRRSHDVASRFCYIGSVLRTKSPSMFSSRTPI 131

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     AD E+  +M +TL     K +  H+ I +  +   IL +        
Sbjct: 132 QTGCELYGVVGSAADIEIISLMLETLNL--AKISPLHMDIAHVGVYQAILAEA------- 182

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                       KL K   + +   L         +        + +  +M        +
Sbjct: 183 ------------KLSKIQSEELFEALRRKAIPEVDEIAATIPDKAIRQKVMALPRLAGGK 230

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + M E  ++  G    E   +E+  ++ ++ +  Y    I      +RG +YYTG V+ A
Sbjct: 231 EKMKEARKIFAGNPDIEYALDEMSQVAAVIGER-YPEVEIYFDFCEMRGYKYYTGLVFAA 289

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                         +  +V  GGRYD +   F     PA GFS+        LK+L    
Sbjct: 290 YTE----------GLGQAVAKGGRYDEVGRDFGRG-RPAMGFSVD-------LKALYRMG 331

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                     I   +      ++     + LR +    ++  G 
Sbjct: 332 KREWAQPAGAILAPNGQD---AELWELIRQLRRSNRVIQLMPGE 372


>gi|62319601|dbj|BAD95073.1| histidyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 208

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 17/225 (7%)

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +   L +   KS+ +L +++ G     +   +L  +  L  K GY S  I+  +++VRGL
Sbjct: 1   IEQLLQVLSVKSLDDLEDIIGGAG---EAIADLKQLFSLAEKFGY-SEWIQFDASVVRGL 56

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            YYTG V+E            +     ++ GGGRYD L+S + G + PA GF  G + ++
Sbjct: 57  AYYTGIVFEGF---------DRKGKLRAICGGGRYDRLLSTYGGDDFPACGFGFGDAVIV 107

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             LK  +      +E   V       D D           LR  G   ++ L  SK    
Sbjct: 108 ELLKEKDLLPELGQE---VENIVCALDKDLQGAAATVATALRDKGQTVDLVL-ESKPLKW 163

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
             K A R N    ++ G  E   G + +K L+ G++   ++ + E
Sbjct: 164 VFKRAARVNARRLVLVGKTEWEDGSVSVKVLSSGEQFQVKLSDLE 208


>gi|109892211|sp|Q2SBC7|HISZ_HAHCH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
          Length = 400

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 143/404 (35%), Gaps = 48/404 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E      +   + ++Y ++G++ I  PLLE+ DSL   +  +      +
Sbjct: 9   LPDGVEELLPPEATRIEELRRQLLDLYHSWGYEMIVPPLLEFLDSLLIGVGRDLEL--EM 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  +     +        IG V R +       R  I
Sbjct: 67  FKVTDQLTGRLMGIRADMTPQVARIDSRRSHDVASRF--CYIGSVLRTKSPSMFSSRTPI 124

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     AD E+  +M +TL     K +  H+ I +  +   IL +        
Sbjct: 125 QTGCELYGVVGSAADIEIISLMLETLNL--AKISPLHMDIAHVGVYQAILAEA------- 175

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                       KL K   + +   L         +        + +  +M        +
Sbjct: 176 ------------KLSKIQSEELFEALRRKAIPEVDEIAATIPDKAIRQKVMALPRLAGGK 223

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + M E  ++  G    E   +E+  ++ ++ +  Y    I      +RG +YYTG V+ A
Sbjct: 224 EKMKEARKIFAGNPDIEYALDEMSQVAAVIGER-YPEVEIYFDFCEMRGYKYYTGLVFAA 282

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                         +  +V  GGRYD +   F     PA GFS+        LK+L    
Sbjct: 283 YTE----------GLGQAVAKGGRYDEVGRDFGRG-RPAMGFSVD-------LKALYRMG 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                     I   +      ++     + LR +    ++  G 
Sbjct: 325 KREWAQPAGAILAPNGQD---AELWELIRQLRRSNRVIQLMPGE 365


>gi|218671288|ref|ZP_03520958.1| histidyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 108

 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 58/94 (61%), Positives = 72/94 (76%)

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             ++YQ  TQ LR AGIRAEMF G+ K FGNQLKYADRR CP+AIIQG  ER+ G++QIK
Sbjct: 4   RWARYQKMTQELRAAGIRAEMFQGNWKKFGNQLKYADRRGCPVAIIQGGDERATGVVQIK 63

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELV 482
           DL +GK LS EI++N SWREA  +Q T+P + L+
Sbjct: 64  DLIEGKRLSGEIEDNASWREAPASQDTLPDAHLI 97


>gi|326920637|ref|XP_003206575.1| PREDICTED: eukaryotic translation initiation factor 2-alpha kinase
            4-like, partial [Meleagris gallopavo]
          Length = 1605

 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 90/481 (18%), Positives = 178/481 (37%), Gaps = 53/481 (11%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             +I+  + + I  I++ +G   + TPLL   +   K L + +  +  +    D  G  + 
Sbjct: 1016 AKIQQHVCEIISRIFKRHGAIKLHTPLLMPRN---KKLYEHNEASYLM----DHSGMLVM 1068

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L YDL  P AR+VA N    +   + Y I  VFR  K      ++ ++C  D + S+  +
Sbjct: 1069 LPYDLRIPFARFVARNN---ISNLKRYCIERVFRPRKLDRCHPKELLECAFDIITSTGNS 1125

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNERLIVLRA 199
                   + A +                       L  IL   G+  D      +I+  A
Sbjct: 1126 FLPLAETIYAISEIIQEFSVLQERNYSIYLNHTSLLKAILLHCGIPEDKLNQVYIILCDA 1185

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM------H 253
            +                +             +LTS  +  +  F+    E S        
Sbjct: 1186 V--------------TEKLTKREVEAKFCNLSLTSNSLSRLYRFIEQKGEASNVFPFLNT 1231

Query: 254  ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
             + +    T   + G  +L  I  L+++ G    +I I+  +V  ++ + G +++    F
Sbjct: 1232 MIKQKPGVTQLLKHGMKDLEEIIGLLKQLGIKL-QISINLGLVYKIQQHNGIIFQ----F 1286

Query: 314  PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-VPATGFSIGISRLIVALKSLESSTNNI 372
                ++++  V   +  GGRYD L+ +F+G   V     ++G+S  I  + +  SS  + 
Sbjct: 1287 VAYIKRRQRTVPEILAAGGRYDHLIPQFRGPQAVGPVPSAVGVSIAIDKITAAVSSMEDT 1346

Query: 373  KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
              +    +  +     S+ +     Q L TAGI AE+    S++     +Y         
Sbjct: 1347 ISVSSCDLLVVSVGQMSMGRAINIVQKLWTAGIPAEIMYDWSQSQEELQEYCRCSGITYV 1406

Query: 433  IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
             +    E S   +++K   K ++  + I  ++             +  LV  +K  + + 
Sbjct: 1407 ALVSDKEGS--HVKVKSFEKDRQTEKRIFESDL------------VDHLVQKLKTKICDE 1452

Query: 493  K 493
            +
Sbjct: 1453 R 1453


>gi|47230269|emb|CAG10683.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1683

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 82/453 (18%), Positives = 170/453 (37%), Gaps = 43/453 (9%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             +++  + ++I  I++ +G   ++TPLL   +   + L +       +    D  G  ++
Sbjct: 1097 AKLQQHVHETIIRIFKKHGAVRLQTPLLFPRN---RKLYEG----SELACFMDHSGMLVT 1149

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE- 141
            L YDL    ARYVA N  T     + Y I  VFR  K      R+ ++C  D +      
Sbjct: 1150 LPYDLRMAFARYVARNNITQ---LKRYSIDRVFRPRKLDRAHPRELLECAFDIITPVTNS 1206

Query: 142  --TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
                   +  +     E   ++  +YHI +N+  +L  IL   G+  D       I+  A
Sbjct: 1207 LLPDAEAIYAVSEIIQEFPSLQERNYHIYLNHTSLLKAILLHSGIPEDKLSQASNILCDA 1266

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
            +                +             +L++  + ++  ++    +  + EL  L+
Sbjct: 1267 MS--------------EKLTKREVEAKFCNFSLSTNSLQMLYKYIEQKGD--LQELAPLL 1310

Query: 260  KGTIAGEKGFNEL-VVISELVRKSGYNSNRIKISSTIVRGLE--YYTGCVYEAILGFPVM 316
                  +   ++L     + + +     +++ +   +V  L   Y        I  F   
Sbjct: 1311 TSLTKHKTAVSQLAKQGLKDLEEVTGLLDKLAVKLQVVINLGLVYKVQHHSGVIFQFVAF 1370

Query: 317  NEKQKPVVFGSVGGGGRYDGLVSRFKGQN-----VPATGFSIGISRLIVALKSLESSTNN 371
              K+K  V   +  GGRYD L++ F+G         A G S+ + ++  AL ++E     
Sbjct: 1371 VRKRKKTVPDIIAAGGRYDHLIAEFRGPASTVPVPSAVGISLSLEKVCFALATMEEPP-- 1428

Query: 372  IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
               +    +  +     S+++     Q L + GI A++    S++    L++        
Sbjct: 1429 --SVSYCDVLVVPVGQSSMTRAINVVQRLWSTGISADITYDVSQSQETLLEHCRLAGINC 1486

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              +    E S   +++K   K ++  + I   +
Sbjct: 1487 MALVSDKEGS--HVKVKSFEKDRQSEKRIPELD 1517


>gi|332646398|gb|AEE79919.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana]
          Length = 1265

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 55/455 (12%), Positives = 135/455 (29%), Gaps = 24/455 (5%)

Query: 24   RIRNRILDSIRNIYENYGFDPIET-PLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             +R+ +++  + ++  +    +E  P+        + L D  + ++    L  + G  + 
Sbjct: 819  ELRDYVVEITKEVFRQHCAKHLEVIPM--------RLLSDCPQFSRKTVKLLTNGGDMLE 870

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L Y+L  P   +++ N  +         +              +         +  +   
Sbjct: 871  LCYELRLPFVHWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADFDIVGGTLSLTEAE 930

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +  +                I +N+  +LD I    G+  +    +   +L  +  
Sbjct: 931  VLKVIVDITTHIFHR-----GSCDIHLNHGDLLDAIWSWAGIKAE-HRRKVAELLSMMGS 984

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
            L     +  + L             K       ++  + S    D ++++  L   ++  
Sbjct: 985  LRPQSSE--RKLKWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRGALRAD 1042

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                K  +EL  +   +R        + I   +     Y+    ++  L     +     
Sbjct: 1043 RPTRKALDELSNLLTYLRVWRI-EEHVHIDVLMPPTESYHRNLFFQVFLTKENSSGTSND 1101

Query: 323  VVFGSVGGGGRY--DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
             V  +VGG   +    +  R    N+P           I     ++      +    VL+
Sbjct: 1102 GVLLAVGGRYDWLVQEVCDREHKMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTSVLV 1161

Query: 381  TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +       L +       L    I+AE       +   Q +YA+       +I      
Sbjct: 1162 CSRGGGG-LLVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIITESGV 1220

Query: 441  SRGM---LQIKDLAKGKELSREIKNNESWREARVA 472
            ++     ++++ L   KE     +    +    +A
Sbjct: 1221 AQNQIEFVKVRHLELKKEKVVGREELVKFLLDAMA 1255


>gi|149570328|ref|XP_001518247.1| PREDICTED: similar to Eukaryotic translation initiation factor
            2-alpha kinase 4 (GCN2-like protein), partial
            [Ornithorhynchus anatinus]
          Length = 1608

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 94/485 (19%), Positives = 187/485 (38%), Gaps = 71/485 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +I+  + +++  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1020 AKIQQHVCETVARIFKRHGAVELPTPLL-----LPR--------NRQIYEHNEAALFMDP 1066

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L YDL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1067 SGTLVMLPYDLRIPFARYVARNN---ISNLKRYCIERVFRPRKLDRCHPKELLECAFDVV 1123

Query: 137  GSS---AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
              +          +  +     E  G++  +Y++ +N+  +L  IL   G+         
Sbjct: 1124 TCTASSFLPVTEVIYTIYEIIQEFPGLQERNYNVFLNHTALLRAILLHCGVPE------- 1176

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS-----IDL 248
                   DKL +  +     +                +L+   +  + +F+       DL
Sbjct: 1177 -------DKLGQVYVILNDAVTERLTRREVEAKFCNLSLSPNSLRRLYTFIEQKGDLRDL 1229

Query: 249  EKSMHELYELVKG-TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             ++++++     G     + G  +L  +  L++K G     +K+  ++  GL Y     +
Sbjct: 1230 SRTLNQVATQKSGVAQLVKHGVKDLEEVVGLLKKLG-----VKLQVSVNLGLVYKVQQHH 1284

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + ++ 
Sbjct: 1285 GVIFQFVAFIKRRQKTVPEILAAGGRYDHLIPQFRGPQALGPVPSAIGVSVAIDRMAAVV 1344

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN-QLKYAD 425
            +S      +    +  +     S+ +    TQ L TAGI A++    S++    QL +  
Sbjct: 1345 ASMEESVTVSSCDLLVVSAGQLSMPRAIGITQKLWTAGIAADIMYDWSQSQEELQL-HCR 1403

Query: 426  RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                  A +    E S   +++K   K ++  +                 +  S+LV  V
Sbjct: 1404 LHEISFAALVSDKEGS--YVKVKHFEKERQTEKR----------------VLESDLVDHV 1445

Query: 486  KKILQ 490
             + L+
Sbjct: 1446 TQRLR 1450


>gi|296422191|ref|XP_002840645.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636866|emb|CAZ84836.1| unnamed protein product [Tuber melanosporum]
          Length = 514

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 82/449 (18%), Positives = 147/449 (32%), Gaps = 51/449 (11%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K       P+G  D   K+I IR++I+ S+  +++ +G   I+TP+ E  + +     + 
Sbjct: 6   KRTFSVRAPQGTRDWFGKDIIIRDKIISSMVEVFKRHGAATIDTPIFELLNPMISGQDES 65

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
                    L D  G+  +LRY L   L R++A          + Y++G  +R    G G
Sbjct: 66  PVC-----KLADQGGELTALRYSLRDSLTRWLA---LRGAQSAKIYQVGKEYRRIADGFG 117

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV-GIKRNDYHIGINNRKILDGILEKI 182
           R     +                   M+  T+E + G+K   Y I IN+  IL G+LE  
Sbjct: 118 RSIAEEKIRCHLGVFGVSDGLLAEAEMLRVTMEVLDGLKLGAYSIKINHSLILKGVLEVC 177

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +           + + I+ + K     V             + T    L     D +  
Sbjct: 178 QVPEK----LWRKLAKMINNISKTSWDQV-----------YLEMTTDLELGKAIADKLGG 222

Query: 243 FLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +++    + +       E +   +A  KG NE+   S+L+   G    +I    ++ R  
Sbjct: 223 YVAKTGGRHLVYDLLLDEELTKNVAFSKGINEMKNFSDLLEIFGVTP-KIAFDLSLARPD 281

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
              T  +YE +     +    K +    +  G  Y            P TG    +  + 
Sbjct: 282 FLSTALMYEVVTLPLSIKSSGKTIDSVEIASGASYYQWSGYLYKAAFPITGIEFELEDIF 341

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             +K+             V    M      L +              AE           
Sbjct: 342 RIIKAR--VPAGQVWDTEVDAYVMAVGGSFLVERMQ-----------AEFLHKEMPEPT- 387

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                       A++    E  +G ++IK
Sbjct: 388 ---------YRFAVVLSEEEVKQGKVKIK 407


>gi|7801691|emb|CAB91611.1| protein kinase like [Arabidopsis thaliana]
          Length = 1271

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 55/455 (12%), Positives = 135/455 (29%), Gaps = 24/455 (5%)

Query: 24   RIRNRILDSIRNIYENYGFDPIET-PLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             +R+ +++  + ++  +    +E  P+        + L D  + ++    L  + G  + 
Sbjct: 825  ELRDYVVEITKEVFRQHCAKHLEVIPM--------RLLSDCPQFSRKTVKLLTNGGDMLE 876

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L Y+L  P   +++ N  +         +              +         +  +   
Sbjct: 877  LCYELRLPFVHWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADFDIVGGTLSLTEAE 936

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +  +                I +N+  +LD I    G+  +    +   +L  +  
Sbjct: 937  VLKVIVDITTHIFHR-----GSCDIHLNHGDLLDAIWSWAGIKAE-HRRKVAELLSMMGS 990

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
            L     +  + L             K       ++  + S    D ++++  L   ++  
Sbjct: 991  LRPQSSE--RKLKWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRGALRAD 1048

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                K  +EL  +   +R        + I   +     Y+    ++  L     +     
Sbjct: 1049 RPTRKALDELSNLLTYLRVWRI-EEHVHIDVLMPPTESYHRNLFFQVFLTKENSSGTSND 1107

Query: 323  VVFGSVGGGGRY--DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
             V  +VGG   +    +  R    N+P           I     ++      +    VL+
Sbjct: 1108 GVLLAVGGRYDWLVQEVCDREHKMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTSVLV 1167

Query: 381  TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +       L +       L    I+AE       +   Q +YA+       +I      
Sbjct: 1168 CSRGGGG-LLVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIITESGV 1226

Query: 441  SRGM---LQIKDLAKGKELSREIKNNESWREARVA 472
            ++     ++++ L   KE     +    +    +A
Sbjct: 1227 AQNQIEFVKVRHLELKKEKVVGREELVKFLLDAMA 1261


>gi|30694992|ref|NP_191500.2| protein kinase family protein [Arabidopsis thaliana]
 gi|68052253|sp|Q9LX30|GCN2_ARATH RecName: Full=Probable serine/threonine-protein kinase GCN2
 gi|24940154|emb|CAD30860.1| GCN2 homologue [Arabidopsis thaliana]
 gi|332646397|gb|AEE79918.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana]
          Length = 1241

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 55/455 (12%), Positives = 135/455 (29%), Gaps = 24/455 (5%)

Query: 24   RIRNRILDSIRNIYENYGFDPIET-PLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             +R+ +++  + ++  +    +E  P+        + L D  + ++    L  + G  + 
Sbjct: 795  ELRDYVVEITKEVFRQHCAKHLEVIPM--------RLLSDCPQFSRKTVKLLTNGGDMLE 846

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L Y+L  P   +++ N  +         +              +         +  +   
Sbjct: 847  LCYELRLPFVHWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADFDIVGGTLSLTEAE 906

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +  +                I +N+  +LD I    G+  +    +   +L  +  
Sbjct: 907  VLKVIVDITTHIFHR-----GSCDIHLNHGDLLDAIWSWAGIKAE-HRRKVAELLSMMGS 960

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
            L     +  + L             K       ++  + S    D ++++  L   ++  
Sbjct: 961  LRPQSSE--RKLKWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRGALRAD 1018

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                K  +EL  +   +R        + I   +     Y+    ++  L     +     
Sbjct: 1019 RPTRKALDELSNLLTYLRVWRI-EEHVHIDVLMPPTESYHRNLFFQVFLTKENSSGTSND 1077

Query: 323  VVFGSVGGGGRY--DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
             V  +VGG   +    +  R    N+P           I     ++      +    VL+
Sbjct: 1078 GVLLAVGGRYDWLVQEVCDREHKMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTSVLV 1137

Query: 381  TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +       L +       L    I+AE       +   Q +YA+       +I      
Sbjct: 1138 CSRGGGG-LLVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIITESGV 1196

Query: 441  SRGM---LQIKDLAKGKELSREIKNNESWREARVA 472
            ++     ++++ L   KE     +    +    +A
Sbjct: 1197 AQNQIEFVKVRHLELKKEKVVGREELVKFLLDAMA 1231


>gi|225433872|ref|XP_002264839.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1261

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 66/477 (13%), Positives = 145/477 (30%), Gaps = 41/477 (8%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIET-PLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
            +  +R+ + +  R ++ ++    +E  P+        + L D  +  +    L    G  
Sbjct: 795  DTELRDHVSEVTREVFRHHCAKRLEVVPI--------RLLDDCPQTIRNTVKLLTHGGDM 846

Query: 81   ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            I L ++L  P   +V  N  +                   G     +++Q D D +G + 
Sbjct: 847  IELCHELRLPFVNWVITNQKSSFKRYEVSY----VYRRAIGHSAPNRYLQGDFDMIGGAT 902

Query: 141  ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
               +AE+  +  D +       N   I +N+  +L+ I   IG+  +    +   +L  +
Sbjct: 903  ALTEAEVIKVAMDIVTHF-FHSNSCGIHLNHGDLLEAIWSWIGIKAE-HRQKVAELLSMM 960

Query: 201  DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
              L     +  + L               A     ++  +        ++++  L   + 
Sbjct: 961  SSLRPQSPE--RKLKWVVIRRQLQQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 1018

Query: 261  GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                  K  +EL  +   +R        + I + +     Y+    ++  L         
Sbjct: 1019 ADKPTRKALDELADLFSYLRVWRI-EKHVFIDALMPPTESYHRDLFFQIYLMKENNPGSL 1077

Query: 321  KPVVFGSVGGG---------------------GRYDGLVSRFKGQNVPATGFSIGISRLI 359
            K  V  ++GG                      GR +   +    +     G       L 
Sbjct: 1078 KEGVLLAIGGRYDQLLREMCFASSIEVLSGAEGRLEDTTTDLPTEKSNPPGAVGVSLALE 1137

Query: 360  VALKSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++         +    + +          L +       L    I+AE    S  +  
Sbjct: 1138 TVIQHSSMDIRPFRNEVGINVLVCSRGGGGLLEERMELVAGLWEENIKAEFVPVSDPSLT 1197

Query: 419  NQLKYADRRNCPLAIIQGTGERS-RGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             Q +YA+  +    +I      S    ++++ L   KE   E +N   +  +   Q 
Sbjct: 1198 EQYEYANEHDIKCLVIITDTGVSPTDFVKVRHLELKKEKEVERENLVKFLHSIATQF 1254


>gi|195172033|ref|XP_002026806.1| GL26978 [Drosophila persimilis]
 gi|194111745|gb|EDW33788.1| GL26978 [Drosophila persimilis]
          Length = 263

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 101/262 (38%), Gaps = 15/262 (5%)

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
                 L     +++  ++ +     + E         A       L  +  L++     
Sbjct: 1   MVTEKGLDEATAEMIGEYVRLSGGTELVEQLLADPKLKAVTNAVKGLEGMQLLLKYCSIF 60

Query: 286 --SNRIKISSTIVRGLEYYTGCVYEAILGFPVM-----------NEKQKPVVFGSVGGGG 332
               R+    ++ RGL+YYTG +YE +L                 E  +    GSV GGG
Sbjct: 61  GLDKRVSFDLSLARGLDYYTGVIYEGVLKAEPSSRPPAKSPQQNGETAEQATVGSVAGGG 120

Query: 333 RYDGLVSRFKGQ--NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           RYD LV  F  +   VP  G SIG+ R+   L++  +++        V            
Sbjct: 121 RYDNLVGMFDTRGKAVPCVGVSIGVERIFAVLEARFAASKVKLRTNDVEAYVASAHKGLH 180

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
            +       L  AGI+AE     +     QL++ +    PL ++ G  E ++G+++++++
Sbjct: 181 EQRLRVLNQLWDAGIKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKLREV 240

Query: 451 AKGKELSREIKNNESWREARVA 472
              +E S ++++       R  
Sbjct: 241 TTRQETSVKLEDLPGEIRRRQQ 262


>gi|297817238|ref|XP_002876502.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322340|gb|EFH52761.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1242

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 56/455 (12%), Positives = 134/455 (29%), Gaps = 24/455 (5%)

Query: 24   RIRNRILDSIRNIYENYGFDPIET-PLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             +R+ ++D  + ++  +    +E  P+        + L D  + ++    L  + G  + 
Sbjct: 796  ELRDYVVDITKEVFRQHCAKHLEVIPM--------RLLSDCPQFSRKTVKLLTNGGDMLE 847

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L Y+L  P   +++ N  +         +              +            +   
Sbjct: 848  LCYELRLPFVNWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADFDIVGGTPSLTEAE 907

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +  +                I +N+  +LD I    G+  +    +   +L  +  
Sbjct: 908  VLKVIVDITTHIFHR-----GSCDIHLNHGDLLDAIWSWAGIKAE-HRRKVAELLSMMGS 961

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
            L     +  + L             K       ++  + S    D ++++  L   ++  
Sbjct: 962  LRPQSSE--RKLKWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRGALRAD 1019

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                K  +EL  +   +R        + I   +     Y+    ++  L     +     
Sbjct: 1020 RPTRKALDELSNLLTYLRVWRI-EEHVHIDVLMPPTESYHRNLFFQVFLTKENSSGTSSD 1078

Query: 323  VVFGSVGGGGRY--DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
             V  +VGG   +    +  R    N+P           I     ++      +    VL+
Sbjct: 1079 GVLLAVGGRYDFLVQEVCDREYKMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTSVLV 1138

Query: 381  TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +       L +       L    I+AE       +   Q +YA+       +I      
Sbjct: 1139 CSRGGGG-LLVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIIAESGV 1197

Query: 441  SRGM---LQIKDLAKGKELSREIKNNESWREARVA 472
            ++     ++++ L   KE     +    +    +A
Sbjct: 1198 AQNQIEFVKVRHLELKKEKVVGREELVKFLLDAMA 1232


>gi|167470075|ref|ZP_02334779.1| histidyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 301

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 46/267 (17%)

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D   +     +++L  +                 +    +  +L  + ++    L EL+ 
Sbjct: 72  DCKRRMYSNPLRVLDSKNPDVQQ---------LLDDAPKLSDYLDEESKQHFAGLCELLD 122

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                      L                       VRGL+YY   V+E +          
Sbjct: 123 KASIPYTVNERL-----------------------VRGLDYYNRTVFEWVTHS------- 152

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                G+V  GGRYDGLV +  G+  PA GF++G+ RL++ ++++ +   + +    V  
Sbjct: 153 -LGAQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNA---DFQVPATVDA 208

Query: 381 TTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
             +     + S   +  + LR A   ++     G   N   Q   AD+    +A++ G  
Sbjct: 209 YVISSGEGAQSAAMLLAESLRDALPTLKIMTNYGGG-NVKKQFTRADKWGARVALMLGES 267

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNES 465
           E +   + +KDL  G++ +    +  +
Sbjct: 268 EVAAQQVVVKDLRNGEQETLAQADVAA 294


>gi|301117482|ref|XP_002906469.1| histidyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262107818|gb|EEY65870.1| histidyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 238

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 12/235 (5%)

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           L    +  ++   S   +K + +  +L       E        +   +   G      + 
Sbjct: 13  LERGSVLRILDSKSEIDQKIIADAPQL--SAFLSEDSKTRFDDVLSGLDALG---ITYRH 67

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
           +  +VRGL+YY+  V+E +      + +Q      +V  GG YDGL     G      G+
Sbjct: 68  NPRLVRGLDYYSNTVFEFV---EKPDAEQATGGGIAVLAGGCYDGLAESLGGPATACVGW 124

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           + G+ RL +     +  T  +  +  V +   D     L +     Q LR  G+    F 
Sbjct: 125 AAGVDRLNLL---RDKPTKAMCSVAIVPVLAGDTSKHVLHEAMRVAQTLRQRGLTV-HFC 180

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
               N   Q+K A+R     A+I G  E  + ++++K+L K +E+   ++   S+
Sbjct: 181 HGKGNMKKQMKAAERYGSTHAVILGGAEVEQQIVKVKNLDKREEVEVTMEELSSF 235


>gi|220934081|ref|YP_002512980.1| histidyl-tRNA synthetase 2 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254801989|sp|B8GND2|HISZ_THISH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|219995391|gb|ACL71993.1| histidyl-tRNA synthetase 2 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 395

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 137/400 (34%), Gaps = 49/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +               + ++Y  +G++ +  P++EY +SL      +       
Sbjct: 9   LPEGIEEALPPLAERLETCRRQLLDLYHRWGYELVMPPMIEYLESLLTGTGSDLDL--QT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D  +G+ + +R D+T  +AR  A +      P R   +G V      G    R  +
Sbjct: 67  FKLTDQLNGRLMGVRADMTPQVARIDA-HSLNRDVPTRLCYMGTVLHTRPDGFAGSRSPM 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     +D E   +M +T    G+   +  + + +  I   +    GL  DD+
Sbjct: 126 QVGAELYGHKGLDSDVETIRLMLETFRVCGV--GNIFLDLGHVDIYRSLAADAGLTADDE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +  +L          F  G +  +E  + +++   ++ +
Sbjct: 184 AQ-------------------LFDMLQRKALPEIRAFLNGLDAPAEVRERLLALGELNGD 224

Query: 250 -KSMHELYELVKGT-IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
              + E   L+ G      +  +EL  I+  V +  Y   R+ +  + +RG  Y+TG V+
Sbjct: 225 TAVLDEARRLLAGAGERVVRALDELSAIAGAV-QRLYPEVRLHVDLSELRGFHYHTGAVF 283

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A +          P     +  GGRYD +   F          + G S  +  L  L  
Sbjct: 284 AAYV----------PGHGQELARGGRYDDIGRVF-----GRARPATGFSTDLKTLVRLSG 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                   G         D D           LR+ G R 
Sbjct: 329 QPLAAAPRG----IFAPADPD--PALLDAVAELRSRGERV 362


>gi|15600132|ref|NP_253626.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           aeruginosa PAO1]
 gi|116053088|ref|YP_793407.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|218894034|ref|YP_002442903.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           aeruginosa LESB58]
 gi|296391779|ref|ZP_06881254.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           aeruginosa PAb1]
 gi|313109941|ref|ZP_07795869.1| putative ATP phosphoribosyltransferase [Pseudomonas aeruginosa
           39016]
 gi|20978510|sp|Q9HUM5|HISZ_PSEAE RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|122256899|sp|Q02F79|HISZ_PSEAB RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|226702202|sp|B7V202|HISZ_PSEA8 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|9951219|gb|AAG08324.1|AE004907_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115588309|gb|ABJ14324.1| putative ATP phosphoribosyltransferase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218774262|emb|CAW30079.1| putative ATP phosphoribosyltransferase [Pseudomonas aeruginosa
           LESB58]
 gi|310882371|gb|EFQ40965.1| putative ATP phosphoribosyltransferase [Pseudomonas aeruginosa
           39016]
          Length = 394

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 144/399 (36%), Gaps = 50/399 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + +++  +G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEAARRQVLDLFHRWGYEFVVTPHIEYLESLLTGAGQDLDLR--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVTDPASGRLMGFRADITPQVARMDA-HSLRREGPSRLCYAGSVLHAQPRALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  +D E+  +M + LE    +  D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDPSPASDVEVISLMLEMLEM--AEVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L +  +  V+ L  +   +  G     A L                 
Sbjct: 184 QQ-------LFDALQRKAVDEVEALTADLPAELRGMLRALAEL-------------CGGR 223

Query: 250 KSMHELYELVKGTIAGEK-GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            ++ +    +    A  +   NEL+ I++ +    +    +      +RG  Y+TG V+ 
Sbjct: 224 DALEQGRARLAAAPADVQVALNELIEIADSL-AGRFPGLPLYFDLGELRGYHYHTGVVFA 282

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P V  S+  GGRYD + + F  +  PATGFS  +  L+   ++    
Sbjct: 283 AFV----------PGVGQSIAQGGRYDDIGADFG-RARPATGFSTDLKSLVTLGQARLDQ 331

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                    V       +   L +     Q LR  G R 
Sbjct: 332 A--------VSGIWAPAEGAGLWQA---VQRLRRDGQRV 359


>gi|254238346|ref|ZP_04931669.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254244170|ref|ZP_04937492.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126170277|gb|EAZ55788.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126197548|gb|EAZ61611.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 394

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 143/399 (35%), Gaps = 50/399 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + +++  +G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEAARRQVLDLFHRWGYEFVVTPHIEYLESLLTGAGQDLDLR--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVTDPASGRLMGFRADITPQVARMDA-HSLRREGPSRLCYAGSVLHAQPRALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  +D E+  +M + LE    +  D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDPSPASDVEVISLMLEMLEM--AEVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L +  +  V+ L  +   +  G     A L                 
Sbjct: 184 QQ-------LFDALQRKAVDEVEALTADLPAELRGMLRALAEL-------------CGGR 223

Query: 250 KSMHELYELVKGTIAGEK-GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            ++ +    +    A  +   NEL+ I++ +    +    +      +RG  Y+TG V+ 
Sbjct: 224 DALEQGRARLAAAPADVQVALNELIEIADSL-AGRFPGLPLYFDLGELRGYHYHTGVVFA 282

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P V  S+  GGRYD + + F  +  PATGFS  +  L+   ++    
Sbjct: 283 AFV----------PGVGQSIAQGGRYDDIGADFG-RARPATGFSTDLKSLVTLGQARLDQ 331

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                    V       +   L       Q LR  G R 
Sbjct: 332 A--------VSGIWAPAEGAGL---WQVVQRLRRDGQRV 359


>gi|14269413|gb|AAK58058.1| histidine-tRNA ligase precursor-like protein [Ophiostoma novo-ulmi]
          Length = 182

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 17/180 (9%)

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P   +  +    GS+  GGRYD LV  +    +P  G S G+ R+   +K+     N   
Sbjct: 14  PAKKKGSEEPQVGSIAAGGRYDNLVGMYGKTQIPCVGVSFGVDRIFTIMKAKREKENGKA 73

Query: 374 EMGPVLITTMDHDSDS----LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            +    +  M     S    L +     + L   GI+AE    +      Q K A+    
Sbjct: 74  RVRETDVYVMAFGGGSFNGMLKERMQIARKLWDGGIKAEFAAKTKPRLPQQFKAAED--V 131

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
           PL +I G  E + G +++K L  G E              +     +   +LV  +KK+L
Sbjct: 132 PLGVILGEDELANGQVRLKVLGSGGETD-----------EKDRGQLVSQDDLVEEIKKLL 180


>gi|292493692|ref|YP_003529131.1| histidyl-tRNA synthetase 2 [Nitrosococcus halophilus Nc4]
 gi|291582287|gb|ADE16744.1| histidyl-tRNA synthetase 2 [Nitrosococcus halophilus Nc4]
          Length = 397

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 138/395 (34%), Gaps = 48/395 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E     R    + +++ ++G+  +  PL+EY +SL   +  +       
Sbjct: 9   LPEGVGELLPAEAEQLERARRVLIDLFHSWGYKLVVPPLIEYLESLLTGVGTDLEL--QT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D   G+ + +R D+T  +AR +A +        R   IG V      G G  R  I
Sbjct: 67  FKFTDQLTGRLMGVRADITPQVAR-IAAHRIKRKGIVRLCYIGSVLHTLPQGLGGARNPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     +D E+  +  + LE VGIK    H+ + +  I   ++ + GL  +++
Sbjct: 126 QVGAELYGHGGIESDLEVLRLALEALEKVGIK--QAHLDLGHVGIFRDLVSQAGLSPEEE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                    L     D      +   + S+   +  +  +++  
Sbjct: 184 YTLFDA-------------------LQRKAQDEMDLMLRNNGVGSKLRRMFTALTNLNGG 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +    E V      E+    L     ++         I      +RG  Y+TG V+  
Sbjct: 225 NEVLAEAEQVLAGSGVEQALTTLKK-VAVLADKYLPQVPIHFDLGELRGYRYHTGLVFAV 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +          P    +V  GGRYD +   F     PATGFSI        LK L + +
Sbjct: 284 YI----------PGRGQAVAQGGRYDDIGEVFGRAQ-PATGFSID-------LKELVTLS 325

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +I      +      D D   +       LR  G
Sbjct: 326 GSISAPCQGIYAPWSEDPDFEQE----VARLRQQG 356


>gi|73541765|ref|YP_296285.1| ATP phosphoribosyltransferase regulatory subunit [Ralstonia
           eutropha JMP134]
 gi|109892445|sp|Q46ZJ2|HISZ_RALEJ RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|72119178|gb|AAZ61441.1| tRNA synthetase, class II (G, H, P and S) [Ralstonia eutropha
           JMP134]
          Length = 383

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 84/396 (21%), Positives = 145/396 (36%), Gaps = 56/396 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 7   LPENIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYLESLLTGTGHDLDLR--T 64

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 65  LKLVDQLSGRTMGLRADITPQVARIDA-HLLNRPGVTRLCYAGNVLHARPAGFHATREPI 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M   L+A G+   D  I + +  IL+ +L+ +       
Sbjct: 124 QVGAEIYGHAGLEADVEIQELMLAALQAAGLS--DIRIDLCHAGILEALLDGLP------ 175

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 + R  D L           L         + T+G   T    D +++  ++   
Sbjct: 176 -----SIRRIEDALF--------AALETKDVSALREITQGMPQTE--RDALLALPTLYGG 220

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +      +  + A  +  +ELV ++  VR        I I  + +RG  Y++G ++ 
Sbjct: 221 VEVIDRARATLPASPAIGRALDELVALATQVR-----GASINIDLSDLRGYHYHSGVMFA 275

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +            +   V  GGRYD +   F  +  PATGFS+ +  +          
Sbjct: 276 AYVA----------GLPNYVARGGRYDKVGEAFG-RARPATGFSLDLREVAAL------- 317

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                            D+D   +  +    LR AG
Sbjct: 318 ---SPIEVRAQAIFAPWDADPALRAAIVA--LRAAG 348


>gi|255614007|ref|XP_002539557.1| histidyl-tRNA synthetase, putative [Ricinus communis]
 gi|223504976|gb|EEF22826.1| histidyl-tRNA synthetase, putative [Ricinus communis]
          Length = 194

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 18/198 (9%)

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
           GE        +  L+ ++G       I+  +VRGL+YY   V+E +          K   
Sbjct: 5   GESSKLHFAKLCALLDQAG---IAYTINHRLVRGLDYYNRTVFEWVTT--------KLGA 53

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
            G++ GGGRYD LV R  G   PA GF IG+ R+ + ++    +  N  +     I  ++
Sbjct: 54  QGTIAGGGRYDTLVERIGGSATPACGFGIGLERVFLLMQEYGVTAANQAD-----IYLVN 108

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
               +  K     + LR+ G+   +  G   +F +Q+K ADR     A I G  E +   
Sbjct: 109 VGDLAEQKAFTVAESLRSMGLNVVLHAGGG-SFKSQMKKADRSGARFAAILGDDEAAANE 167

Query: 445 LQIKDL-AKGKELSREIK 461
           L +K +  +G++    + 
Sbjct: 168 LSLKPMLGQGEQARVSLD 185


>gi|28872052|ref|NP_794671.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|46395799|sp|Q87VJ8|HISZ_PSESM RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|28855305|gb|AAO58366.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|331014614|gb|EGH94670.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 395

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 148/400 (37%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               ANL  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVVAL--------------TANLPPELASMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A   +  ++L+ I++ +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLEALDDLLAIADRLAAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + + F  +  PATGFS  +  L+   ++   
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGADFG-RARPATGFSTDLKTLVTLGQAEIV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             +    M       +                LR+ G R 
Sbjct: 331 LPSGGIWMPDSTDAALWQQ----------VCQLRSEGQRV 360


>gi|224051325|ref|XP_002199487.1| PREDICTED: eukaryotic translation initiation factor 2 alpha kinase 4
            [Taeniopygia guttata]
          Length = 1655

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 87/477 (18%), Positives = 172/477 (36%), Gaps = 55/477 (11%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             +I+  + D +  I++ +G   + TPLL   +   K L + +  +       D  G  + 
Sbjct: 1067 AKIQQHVCDIVSRIFKRHGAIKLHTPLLMPRN---KKLYEHNEASY----FMDHSGMLVM 1119

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            L YDL  P AR+VA N  T +      R                   F            
Sbjct: 1120 LPYDLRIPFARFVARNNITNLKRYCIERVFRPRKLDRCHPKELLECAFDIITSTGNSFLP 1179

Query: 141  ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
                      +      +  +  +Y I +N+  +L  IL   G+  +DKLN+  I+L   
Sbjct: 1180 MAETIYAISEIIQEFSVL--QERNYSIYLNHTALLKAILLHCGIP-EDKLNQVYIILYD- 1235

Query: 201  DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS--MHELYEL 258
                         +  +             +LTS  +  +  F+    E S     L  +
Sbjct: 1236 ------------AVTEKLTKREVEAKFCNLSLTSASLSRLYKFIEQKGEASNVFPFLNTM 1283

Query: 259  VKGTIA----GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
            +K   +     + G  +L  I  L+++ G    +I I+  +V  ++ + G +++    F 
Sbjct: 1284 IKQKPSVTQLLKHGMKDLEEIIGLLKQLGIKL-QISINLGLVYKIQQHNGIIFQ----FI 1338

Query: 315  VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLESSTNNIK 373
               ++++  V   +  GGRYD ++ +F+G         ++G+S  I  + +  SS  +  
Sbjct: 1339 AYIKRRQRTVPEILAAGGRYDHMIPQFRGPQTVGPVPSAVGVSIAIDKITAAVSSVEDSV 1398

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
             +    +  +     S+ +     Q   TAGI AE+    S++     +Y          
Sbjct: 1399 SVSSCDLLVVSVGQMSMGRAINIVQKFWTAGIPAEIMYDWSQSQEELQEYCRCSGITYVA 1458

Query: 434  IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
            +    E+    +++K   K ++  + I                  S+LV  + + L+
Sbjct: 1459 LV--SEKEGSHVKVKSFEKDRQTEKRILE----------------SDLVDHLIQKLK 1497


>gi|56808429|ref|ZP_00366177.1| COG0124: Histidyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 263

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 94/273 (34%), Gaps = 44/273 (16%)

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D   +     +++L  + + D          L  E+   ++ +L  + +     + ++++
Sbjct: 32  DSQRRLDENPLRVLDSKEKEDK---------LAVEKAPSILDYLDEESQAHFEAVKDMLE 82

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                                         I + +VRGL+YY   ++E I      +   
Sbjct: 83  AL-----------------------DIPYVIDTNMVRGLDYYNHTIFEFITSVEGSD--- 116

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                 ++  GGRYD LV  F G   P  GF +G+ RL++ ++    +     EM    +
Sbjct: 117 -----LTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMIIEKQGITLPIETEMD---V 168

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
                   + SK     Q +R  G  AE      +    Q K AD     L +  G  E 
Sbjct: 169 YLAVLGDGANSKALELVQAIRRQGFTAERDY-LGRKIKAQFKSADTFKAKLVMTLGESEV 227

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             G   IK+    +E+    ++  +       Q
Sbjct: 228 EAGKAVIKNNRSRQEVEVSFEDMMTNFANISEQ 260


>gi|196228821|ref|ZP_03127687.1| Histidine--tRNA ligase [Chthoniobacter flavus Ellin428]
 gi|196227102|gb|EDY21606.1| Histidine--tRNA ligase [Chthoniobacter flavus Ellin428]
          Length = 234

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 5/207 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   GF D    +   RN IL   R +   YGF   + P++E      K    E      
Sbjct: 2   QTLPGFRDFYPDDCARRNYILTKWREVARRYGFVEYDGPVVESMALYEKKSGGELVG--Q 59

Query: 70  VFSL---QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +F++    D       LR ++T  LAR V         P + + +   FR+E+ G GR R
Sbjct: 60  MFTVGATADPGSLKGVLRPEMTPTLARMVTARERDFKKPMKWFCVPNFFRHERQGRGRLR 119

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q + D VG     ADAE+  ++ D L A G+   D+ + +++R        + G   
Sbjct: 120 EFYQLNCDIVGEPTPAADAELIAILIDMLRAFGLTEADFAVRLSSRTAWQQFFIQSGGKP 179

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKL 213
           +D+     IV +A     +   + ++ 
Sbjct: 180 EDEYEFFQIVDKAERNPPEKTDELLRK 206


>gi|90022307|ref|YP_528134.1| ATP phosphoribosyltransferase regulatory subunit [Saccharophagus
           degradans 2-40]
 gi|109892449|sp|Q21HA7|HISZ_SACD2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|89951907|gb|ABD81922.1| tRNA synthetase, class II (G, H, P and S) [Saccharophagus degradans
           2-40]
          Length = 394

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 81/433 (18%), Positives = 155/433 (35%), Gaps = 62/433 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +    LP G  +   +E      +   + ++++++G+D +  P++E+ DSL    
Sbjct: 1   MKKVDR--WLLPDGIEEVLPEEASRVEGLRRRLVDLFQSWGYDYVIPPMVEFIDSLLTGS 58

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            ++       F + D   G+ + +R D+T   AR  A +        R    G V   + 
Sbjct: 59  GEDAYL--DTFKITDQLSGKTMGIRADITPQAARMDA-HSLQREGLNRLCYAGHVMYTKP 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
            GP   R  IQ  V+  G S   AD E+  ++ +TLEA G+   D +I I +  +   ++
Sbjct: 116 KGPLASRTPIQVGVELFGESGLDADIEVISLLLETLEAAGL--PDLYIDIGHVGVYRALI 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E+ G+  + +           + L    +  ++  +    TD                + 
Sbjct: 174 EEAGISKEQEEV-------YFELLQAKSINSIESWVANNITDAKM------------AEW 214

Query: 240 MVSFLSIDLEKSMHELYELV--KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
           +++   +     +    + +            +EL +I  ++ +   +S R     + +R
Sbjct: 215 LLALPRLAGGNHILAEAKALFEDAPAEVSAAIDELEMIDSVLTERYPHSKRY-FDLSELR 273

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           G  YYTG ++ A            P +  ++  GGRYD +   F                
Sbjct: 274 GYHYYTGVIFGAFA----------PGLGNAIANGGRYDHVGEAFG-------RARAATGF 316

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS---- 413
               +    S      E+ P  I   D D+D +         LR +G R    L      
Sbjct: 317 AADLMS--ISRVTGRCELAPSGIYVEDSDADGIWAKIK---QLRASGERVVCALAGQTAP 371

Query: 414 ------SKNFGNQ 420
                 ++    Q
Sbjct: 372 YKHQHCNRKLIKQ 384


>gi|152987753|ref|YP_001350987.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           aeruginosa PA7]
 gi|166219837|sp|A6VD52|HISZ_PSEA7 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|150962911|gb|ABR84936.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 394

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 85/400 (21%), Positives = 147/400 (36%), Gaps = 52/400 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + +++  +G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEAARRQVLDLFHRWGYEFVVTPHIEYLESLLTGAGQDLDLR--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVTDPASGRLMGFRADITPQVARMDA-HSLRREGPSRLCYAGSVLHAQPRALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++  +D E+  +M D LE    +  D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPASDVEVISLMLDMLEM--AEVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L +  +  V+ L               A+L  E  D++ +   +   
Sbjct: 184 QQ-------LFDALQRKAVDEVEAL--------------TASLPGELRDMLRALAELCGG 222

Query: 250 KSMHEL--YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           +   E     L       +   NEL+ I++ +    +    +      +RG  Y+TG V+
Sbjct: 223 RDALEQGRVRLAAAPTEVQVALNELIEIADSLAAR-FPGLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A +          P V  S+  GGRYD + + F  +  PATGFS  +  L+   ++   
Sbjct: 282 AAFV----------PGVGQSIAQGGRYDDIGADFG-RARPATGFSTDLKNLVTLGQARLD 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                     V       +   L +     Q LR  G R 
Sbjct: 331 QA--------VSGIWAPAEGAGLWQA---VQRLRRDGQRV 359


>gi|194670642|ref|XP_001787713.1| PREDICTED: Gcn2-like [Bos taurus]
          Length = 1570

 Score =  108 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 88/486 (18%), Positives = 174/486 (35%), Gaps = 63/486 (12%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +I+  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 982  AKIQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1028

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1029 SGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1085

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  ++     ++                           L  IL   G+  D      
Sbjct: 1086 TSTTNSSLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 1145

Query: 194  LIVLRAIDKLDKFGLQGVK---LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            +I+  A+ +         K   L L          F +      +    + S +      
Sbjct: 1146 VILYDAVTEKLTRREVEAKFCNLSLSSSSLCRLYKFIEQKGELQDLTPTINSLIKQKT-- 1203

Query: 251  SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                           + G  +L  +  L++K G    ++ I+  +V  ++ ++G +++  
Sbjct: 1204 ---------GVAQLVKYGLKDLEEVVGLLKKFGIKL-QVLINLGLVYKVQQHSGIIFQ-- 1251

Query: 311  LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLESST 369
              F     +++  +   +  GGRYD L+ +F+G         +IG+S  I  + +   + 
Sbjct: 1252 --FVAFIRRRQRAISEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKITTAVLNM 1309

Query: 370  NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                 +    +  +     S+S+    TQ L +AGI AE+    S++     +Y      
Sbjct: 1310 EEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWSAGITAEIMYDWSQSQEELQEYCRHHEI 1369

Query: 430  PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
                +    E S   +++K                S+ + R  +  +P S+LV  V + L
Sbjct: 1370 TYVALVSDKEGS--HVKVK----------------SFEKDRQTEKRVPESDLVDHVVQKL 1411

Query: 490  QENKEE 495
            +    +
Sbjct: 1412 RTKVSD 1417


>gi|297479497|ref|XP_002690831.1| PREDICTED: Gcn2-like [Bos taurus]
 gi|296483339|gb|DAA25454.1| Gcn2-like [Bos taurus]
          Length = 1649

 Score =  108 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 88/486 (18%), Positives = 174/486 (35%), Gaps = 63/486 (12%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +I+  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1061 AKIQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1107

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1108 SGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1164

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  ++     ++                           L  IL   G+  D      
Sbjct: 1165 TSTTNSSLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 1224

Query: 194  LIVLRAIDKLDKFGLQGVK---LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            +I+  A+ +         K   L L          F +      +    + S +      
Sbjct: 1225 VILYDAVTEKLTRREVEAKFCNLSLSSSSLCRLYKFIEQKGELQDLTPTINSLIKQKT-- 1282

Query: 251  SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                           + G  +L  +  L++K G    ++ I+  +V  ++ ++G +++  
Sbjct: 1283 ---------GVAQLVKYGLKDLEEVVGLLKKFGIKL-QVLINLGLVYKVQQHSGIIFQ-- 1330

Query: 311  LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLESST 369
              F     +++  +   +  GGRYD L+ +F+G         +IG+S  I  + +   + 
Sbjct: 1331 --FVAFIRRRQRAISEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKITTAVLNM 1388

Query: 370  NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                 +    +  +     S+S+    TQ L +AGI AE+    S++     +Y      
Sbjct: 1389 EEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWSAGITAEIMYDWSQSQEELQEYCRHHEI 1448

Query: 430  PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
                +    E S   +++K                S+ + R  +  +P S+LV  V + L
Sbjct: 1449 TYVALVSDKEGS--HVKVK----------------SFEKDRQTEKRVPESDLVDHVVQKL 1490

Query: 490  QENKEE 495
            +    +
Sbjct: 1491 RTKVSD 1496


>gi|113868329|ref|YP_726818.1| ATP phosphoribosyltransferase regulatory subunit [Ralstonia
           eutropha H16]
 gi|123032874|sp|Q0K971|HISZ_RALEH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|113527105|emb|CAJ93450.1| ATP phosphoribosyltransferase, histidyl-tRNA synthetase [Ralstonia
           eutropha H16]
          Length = 383

 Score =  108 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 138/396 (34%), Gaps = 56/396 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 7   LPENIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYLESLLTGTGHDLDLR--T 64

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 65  LKLVDQLSGRTMGLRADITPQVARIDA-HLLNRPGVTRLCYAGNVLHARPAGFHATREPI 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M   L+A G+   D  I + +  IL+ +L  +       
Sbjct: 124 QIGAEIYGHAGLEADIEIQDLMLAALQAAGLS--DVRIDMCHAGILEALLAGLPS----- 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                          +     +   L         + T G   T    D +++  ++   
Sbjct: 177 --------------IRKIEDALFAALETKDVPALRELTVGMPQTE--RDALLALPTLYGG 220

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +      +  + A  +  +EL  +             + I  + +RG  Y++G ++ 
Sbjct: 221 VDVIDRARATLPASPAIGRALDELAAL-----AVQVRGASVNIDLSDLRGYHYHSGVMFA 275

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +            +   V  GGRYD +   F  +  PATGFS+ +  +          
Sbjct: 276 AYVA----------GLPNYVARGGRYDKVGEAFG-RARPATGFSLDLREVAAL------- 317

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            + ++     +    D D    +        LR AG
Sbjct: 318 -SPVEVRAQAIFAPWDADPALRAA----ISALRAAG 348


>gi|88810497|ref|ZP_01125754.1| tRNA synthetase, class II [Nitrococcus mobilis Nb-231]
 gi|88792127|gb|EAR23237.1| tRNA synthetase, class II [Nitrococcus mobilis Nb-231]
          Length = 399

 Score =  108 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 84/398 (21%), Positives = 140/398 (35%), Gaps = 45/398 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    +     R+   + + Y  +G+D +  P +EY ++L      +       
Sbjct: 14  LPDGVDEILPPQAFALERLRRELLDCYYRWGYDLVMPPTIEYLEALLTGAAHDLDL--QT 71

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T   AR  A +      P R   +G V +    GPG  R  +
Sbjct: 72  FKLTDQLTGRMMGVRADITPQAARIDA-HQLRRDCPVRLCYLGAVLQTRPEGPGSSRNPL 130

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   ++AE+  +M +TL   G+     H+ + +  I  G+  + GL  D +
Sbjct: 131 QIGAELYGHAGFESEAEIIALMLETLRIAGVV--QPHLDLGHVGIFRGLTSQAGLGPDAE 188

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                  +R  D L +     ++ +L E     S      A          +  LS  LE
Sbjct: 189 -------MRLWDALQRKAGTEIEAILAEFDVAESLYSMLAA----------LPELSGGLE 231

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                  EL+       +   EL  I+  ++        +      +RG +Y+TG V+ A
Sbjct: 232 VLERANAELMPAQDCVHQALRELRSIANALQHW-LPDVPLHFDLGELRGYQYHTGVVFAA 290

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +                V  GGRY+ +   F               + + AL       
Sbjct: 291 FVA----------GHSHEVARGGRYNHIGRVFGRSR--PATGFSADLKTLFALSDRGQQP 338

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                  PVL      D D  +        LR AG R 
Sbjct: 339 -------PVLGIAAPCDDD--AALLAEVSKLRQAGERV 367


>gi|116074821|ref|ZP_01472082.1| tRNA synthetase, class-II (G, H, P and S) [Synechococcus sp.
           RS9916]
 gi|116068043|gb|EAU73796.1| tRNA synthetase, class-II (G, H, P and S) [Synechococcus sp.
           RS9916]
          Length = 392

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 60/411 (14%), Positives = 119/411 (28%), Gaps = 43/411 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++     + + +  +Y  +G++ +  P +E  ++L          
Sbjct: 1   MALQPASGARDLNPQQVEHNKALRERLAEVYRCWGYEEVSPPQVERMETLKAGGG---IN 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  +  L     + + LR +LTA +AR           P R +  G VF +     G  R
Sbjct: 58  SADIVRLV--ADEPLGLRPELTASIARAATTRLAERPRPLRLWSTGTVFESRLSDEGGQR 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              Q                                   +  +    +L   LE + L  
Sbjct: 116 IEEQLHSGVELFG----------------------SGQVNGELELLSLLMASLEALELQP 153

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  +     ++ +     + ++  + E          +   L SEQ   +   + +
Sbjct: 154 GHGARLLVGHAALMELMLAPIDKNLRDQVKEALVSFDRLQLEQLPLPSEQSQRLQQQMDL 213

Query: 247 DL-EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + + E    + G          L+   E +      + ++  S             
Sbjct: 214 RGTPEQVLEQQRRLFGPQPVLSQLERLLTHLEPLASRLGVTLQLDPSF----------QP 263

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +E   G       Q       +  GGRYD ++ RF      A G        +  ++ L
Sbjct: 264 HFELYDGLVFQLVCQGTSAPVVIARGGRYDRVLKRFGAVGPAAAGLGFSF--CLDDIRDL 321

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR--AEMFLGSS 414
            S+   +K      +        SL       Q L   GI    E+   S 
Sbjct: 322 PSAHQPMKTNAE-RVLVAYGSGASLEAALRRQQELHQQGITAVVELDPVSG 371


>gi|70952202|ref|XP_745285.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56525560|emb|CAH81850.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 542

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 70/507 (13%), Positives = 142/507 (28%), Gaps = 68/507 (13%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K  +     +G       + + R  + +  ++I   + +   + P+LE      K     
Sbjct: 54  KKIISVNSIKGIRTFNQTQYKKREYLFNIWKDIARKFSYTFYDLPVLENFGLFQK----- 108

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYV------AENFDTIVFPCRT--------- 108
                  +     + + + LR ++T  L  Y+        N      P            
Sbjct: 109 -NNINEYYDFI-KNKRHLILRPEITPQLINYLFFKNGGLTNKLETDMPTCRTNCNCADSQ 166

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK---RNDY 165
                             Q  +               ++            +     N+ 
Sbjct: 167 RCSNKCRHKNTSQKQYMLQNFKKTFKMCTIGQCFRYEKISNYRKREHYQWNMDIIGINNI 226

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV-----KLLLGEGRT 220
           +  I    IL    +++ L+  D + +          + K     +     +  + E   
Sbjct: 227 NAEIELFTILLTFFKQVKLYDKDIIIKINNKQIIKSIILKVFKNSLLHYYSQKQIDEIVV 286

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           +         N  S+    ++   +I   K            I   K   +L +      
Sbjct: 287 NKILHILDKYNKISKSNFKLLLQKNIPFIKYNDINNFNN--IIYNIKTVEDLEIFFNFNP 344

Query: 281 KSGYNSN---------------RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
               +++                 K+    VRGL+YY   ++E      +          
Sbjct: 345 NICNDNSVKNILNYFKNLNLHTYFKMDLATVRGLDYYKNTIFEVFYKNKIN--------- 395

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE-------MGPV 378
            ++ GGGRYD         N+PA GF +G   +   L + E++ N   E          +
Sbjct: 396 RAICGGGRYD---FILNKTNIPAVGFGMGDVVISEILFNKENTCNTFDESINIVSFFPNI 452

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
               +   +D   +Y      LR   I+    L ++      LK A+       +     
Sbjct: 453 NNNNIKLKNDKYKEYYDILHTLRMNNIKIYTLLQNNLTLSKALKKANSLKSDYFLFCQEN 512

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNES 465
           E       +K+L  G +    ++N  S
Sbjct: 513 E--ENHFILKNLKTGHQQIVNLENILS 537


>gi|330801632|ref|XP_003288829.1| hypothetical protein DICPUDRAFT_98147 [Dictyostelium purpureum]
 gi|325081120|gb|EGC34648.1| hypothetical protein DICPUDRAFT_98147 [Dictyostelium purpureum]
          Length = 2156

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 75/466 (16%), Positives = 151/466 (32%), Gaps = 36/466 (7%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 +  R R    + NI+ N+G   I+TP L       K     +  N  V    D+ 
Sbjct: 1454 LSPMHLICRERTFVRLENIFRNHGALRIDTPTL-----FPKDSTHSNALN--VAKFLDEG 1506

Query: 78   GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            G  + L YDLT P AR+V  +           R+             F            
Sbjct: 1507 GTVVHLPYDLTVPWARHVVIHGIQHSKRFTFARVYRRSAPGFSPKELFECDFDIVGPPEA 1566

Query: 138  SSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
             S   A+   + + + D         + Y I ++   ILD +L   G+   D       +
Sbjct: 1567 RSVNDAEILRIVVEIMDEFSKEFGPNSSYKIRLSQYSILDSVLSHCGVDKKDYDKVCQSL 1626

Query: 197  LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELY 256
                    K     V   L +  +              ++++I V  LS           
Sbjct: 1627 SFLNW---KHDWDHVSNSLRDTLSPGVIHMLSTIFRKDQELEIAVDQLS----------- 1672

Query: 257  ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVM 316
             L+ G    + G ++L  +   ++      ++     +++  ++YY G V++A++     
Sbjct: 1673 NLLSGHKESKAGLSDLKTLVRNLKMINI-IHKFTFDLSLIHNIQYYDGIVFQAVVQ-RHN 1730

Query: 317  NEKQKPVVFGSVGGGGRYDGLVSRFKGQN-----VPATGFSIGISRLIVALKSLESST-- 369
                +      +  GGRYD L+ +          V   G +I   +++  + +  +    
Sbjct: 1731 PANSQNFKTEIIMAGGRYDKLIGQLHPNPLQSGNVCGIGVTIACEKIVNTVLNFNNQHLL 1790

Query: 370  -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                    +    + +      S  L++       L +  ++A+       +  +   + 
Sbjct: 1791 AKTKSPKSRFQSHIEVFVCSLGSPMLTEKLQVASQLWSVDVKADYSQTEYSSHEDIYSHC 1850

Query: 425  DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             +   P  II   G   +G L+++ L    ++S    N   +    
Sbjct: 1851 RQNGIPWCIIIKEGSYQQGTLKVRYLKNKSDVSILRNNLVDYILKE 1896


>gi|327280149|ref|XP_003224816.1| PREDICTED: eukaryotic translation initiation factor 2-alpha kinase
            4-like [Anolis carolinensis]
          Length = 1647

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 94/481 (19%), Positives = 176/481 (36%), Gaps = 61/481 (12%)

Query: 24   RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL 83
            +I+  + ++I  I++ +G   + TPLL   +   + L +    +  +    D  G  + L
Sbjct: 1060 KIQQHVCETISRIFKRHGAIKLHTPLLMPRN---RKLYEHSEVSYLM----DHSGMLVML 1112

Query: 84   RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETA 143
             YDL  P AR+VA N    +   + Y I  VFR  K      R+ ++C  D +  +  + 
Sbjct: 1113 PYDLRIPFARFVARNN---ITNLKRYCIERVFRPRKLDRCHPRELLECAFDIITPAGNSF 1169

Query: 144  DAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNERLIVLRAI 200
                  +   +                       L  IL   G+  +DKLN+   +L   
Sbjct: 1170 LPIAETIYTISEIIQEFPVLQERNYSIFLNHTALLKAILVHCGIP-EDKLNQVYTILY-- 1226

Query: 201  DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
                      V   L +   +         N++     ++  +  I+ +  + +L  L  
Sbjct: 1227 --------DAVTEKLTKREVEAKF-----CNISLSSNSLVRLYRFIEQKGELQDLTPLFN 1273

Query: 261  GTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
              +  + G          EL     L++K G     IK+  +I  GL Y        I  
Sbjct: 1274 TMLKQKTGATALVKLGLKELEETVALLKKLG-----IKLQVSINLGLVYKIQQHNGIIFQ 1328

Query: 313  FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-VPATGFSIGISRLIVALKSLESSTNN 371
            F    ++++ +V   +  GGRYD L+ +FKG   V     ++G+S  I  + S   +   
Sbjct: 1329 FIAYIKRRQRMVTDILAAGGRYDHLIPQFKGPQAVGPVPSAVGVSIAIDRISSAVLNMEE 1388

Query: 372  IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
               +    +  +     S+++     Q L  AG+ AE+    S++     +Y        
Sbjct: 1389 PVTVSSCDLLVVSVGQTSMARAINIVQKLWVAGVAAEIMYDWSQSQEELQEYCRCSGITY 1448

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            A +    E     +++K                S+ + R A+  I  S+LV  + + L+ 
Sbjct: 1449 AALISDKE--GNHVKVK----------------SFEKERQAEKRILESDLVDHLAQKLRT 1490

Query: 492  N 492
             
Sbjct: 1491 K 1491


>gi|213967928|ref|ZP_03396074.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|301384448|ref|ZP_07232866.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. tomato Max13]
 gi|302064115|ref|ZP_07255656.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. tomato K40]
 gi|302132264|ref|ZP_07258254.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213927271|gb|EEB60820.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. tomato T1]
          Length = 395

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 147/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               ANL  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVVAL--------------TANLPPELASMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      ++L+ I++ +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLAIADRLAAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + + F  +  PATGFS  +  L+   ++   
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGADFG-RARPATGFSTDLKTLVTLGQAEIV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             +    M       +                LR+ G R 
Sbjct: 331 LPSGGIWMPDSTDAALWQQ----------VCQLRSEGQRV 360


>gi|107104038|ref|ZP_01367956.1| hypothetical protein PaerPA_01005111 [Pseudomonas aeruginosa PACS2]
          Length = 394

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 144/399 (36%), Gaps = 50/399 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + +++  +G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEAARRQVLDLFHRWGYEFVVTPHIEYLESLLTGAGQDLDLR--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVTDPASGRLMGFRADITPQVARMDA-HSLRREGPSRLCYAGSVLHAQPRALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  +D E+  +M + LE    +  D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDPSPASDVEVISLMLEMLEM--AEVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L +  +  V+ L  +   +  G     A L                 
Sbjct: 184 QQ-------LFDALQRKAVGEVEALTADLPAELRGMLRALAEL-------------CGGR 223

Query: 250 KSMHELYELVKGTIAGEK-GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            ++ +    +    A  +   NEL+ I++ +    +    +      +RG  Y+TG V+ 
Sbjct: 224 DALEQGRARLAAAPADVQVALNELIEIADSL-AGRFPGLPLYFDLGELRGYHYHTGVVFA 282

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P V  S+  GGRYD + + F  +  PATGFS  +  L+   ++    
Sbjct: 283 AFV----------PGVGQSIAQGGRYDDIGADFG-RARPATGFSTDLKSLVTLGQARLDQ 331

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                    V       +   L +     Q LR  G R 
Sbjct: 332 A--------VSGIWAPAEGAGLWQA---VQRLRRDGQRV 359


>gi|149926257|ref|ZP_01914519.1| ATP phosphoribosyltransferase regulatory subunit [Limnobacter sp.
           MED105]
 gi|149825075|gb|EDM84287.1| ATP phosphoribosyltransferase regulatory subunit [Limnobacter sp.
           MED105]
          Length = 400

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 77/400 (19%), Positives = 147/400 (36%), Gaps = 54/400 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +  S+ + +  YG++ +  P+LEY++SL      +   N   
Sbjct: 6   LPESVADVLPSEARRIEELRRSLLDRFRVYGYELVMPPMLEYTESLL--GNADASLNLQT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV   +  G    R+ +
Sbjct: 64  FKLLDQASGRMLGLRADTTPQVARIDA-HILNRKGVTRLCYCGPVLHTQALGLHNTREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           QC  +  G     AD E+  +  DTL   G+K   Y + +++  +L  ++       D +
Sbjct: 123 QCGAELYGCGGIEADLEILNLAVDTLNLSGLKG--YRLALSHAGLLAAVV-------DGE 173

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-- 247
                ++ R  D L +     ++ LL              A ++      +++ LS+   
Sbjct: 174 GLTDSLIRRLHDSLAQKDRPALETLL--------------AGVSGACKANVLALLSLYGS 219

Query: 248 ---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                  ++   E +          NEL  +   ++++      + +    +   +Y++G
Sbjct: 220 VGGGNCVLNRAAETLPRNPKVGAVLNELRTLIARLQETVSAIPALILDLADLASFDYHSG 279

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++ A +               +V  GGRYD + + +               R +V+L++
Sbjct: 280 LIFSAYVE----------GCPNAVLRGGRYDDVGAVYGRAR--PATGFSVDLRELVSLQA 327

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           + S          V  T          +     + LR+ G
Sbjct: 328 VHSKPKTAIRAPWVYDT----------ELMAVIRELRSQG 357


>gi|118091755|ref|XP_421203.2| PREDICTED: similar to Eukaryotic translation initiation factor
            2-alpha kinase 4 (GCN2-like protein) [Gallus gallus]
          Length = 1656

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 96/480 (20%), Positives = 174/480 (36%), Gaps = 57/480 (11%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             +I+  + + +  I++ +G   + TPLL   +   K L + +  +       D  G  + 
Sbjct: 1067 AKIQQHVCEIVSRIFKRHGAIKLHTPLLMPRN---KKLYEHNEASY----FMDHSGMLVM 1119

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L YDL  P AR+VA N    +   + Y I  VFR  K      ++ ++C  D + S+  +
Sbjct: 1120 LPYDLRIPFARFVARNN---ISNLKRYCIERVFRPRKLDRCHPKELLECAFDIITSTGNS 1176

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNERLIVLRA 199
                   + A +                       L  IL   G+  +DKLN+  I+L  
Sbjct: 1177 FLPLAETIYAISEIIQEFSVLQERNYSIYLNHTSLLKAILLHCGIP-EDKLNQVYIILYD 1235

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM------H 253
                          +  +             +LTS  +  +  F+    E S        
Sbjct: 1236 -------------AVTEKLTKREVEAKFCNLSLTSNSLSRLYRFIEQKGEASNVFPFLNT 1282

Query: 254  ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
             + +    T   + G  +L  I  L+R+ G     IK+  +I  GL Y        I  F
Sbjct: 1283 MIKQKPGVTQLLKHGMKDLEEIIGLLRQLG-----IKLQISINLGLVYKIQQHNGVIFQF 1337

Query: 314  PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLESSTNNI 372
                ++++  V   +  GGRYD L+ +F+G         ++G+S  I  + +  SS  + 
Sbjct: 1338 VAYIKRRQRTVPEILAAGGRYDHLIPQFRGPQTVGPVPSAVGVSIAIDKITAAVSSMEDT 1397

Query: 373  KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
              +    +  +     S+ +     Q L TAGI AE+    S++     +Y         
Sbjct: 1398 ISVSSCDLLVVSVGQMSMGRAINIVQKLWTAGIPAEIMYDWSQSQEELQEYCRCSGITYV 1457

Query: 433  IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
             +    E S   +++K   K ++  + I                  S+LV  + + L+  
Sbjct: 1458 ALVSDKEGS--HVKVKSFEKDRQTEKRIFE----------------SDLVDHLAQKLKAK 1499


>gi|325288890|ref|YP_004265071.1| ATP phosphoribosyltransferase regulatory subunit [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324964291|gb|ADY55070.1| ATP phosphoribosyltransferase regulatory subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 389

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 88/404 (21%), Positives = 164/404 (40%), Gaps = 51/404 (12%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            ++P G  D   +E+ +   +      + +++ +  + TP LEY       +  +     
Sbjct: 8   LKIPEGMRDRLPEELALLEELELKGIGLLKSWSYRKVLTPALEY----KACVEPDPNQQD 63

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F   + DGQ I+LR + T P+AR +       + P R    G VFRN+   P R+R+F
Sbjct: 64  DLFKFFNQDGQIIALRPEFTTPIARMLTTGKTEALLPLRLCYSGDVFRND---PSRYREF 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ VGS  + ADAE+  +  + ++A+  +   + + + +  I  G++E+  +  + 
Sbjct: 121 RQIGVELVGSGVDLADAEVIALAMELMKAL--QAGGFQLNLGHMGIFTGLVEEFQIEDEL 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L                    ++  +G             ++L       M+S   +  
Sbjct: 179 RL-------------------ELEDGIGRKDMVKLEKTVSQSSLPDLCKQFMLSMPHLTG 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + E  E         +    L  I   +++ G   N +++   I+RG  YYTG ++E
Sbjct: 220 REDVLEKLEGWCAIPTIRRAVETLRTIFVFLQEFGVR-NSVQLDLGILRGFSYYTGTIFE 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +          P +   V  GGRYD L + F  +N+PATGF++ +  +   ++  E  
Sbjct: 279 GYI----------PGMGVPVLEGGRYDRLYADFG-RNLPATGFAVNLDMIAEQIEEFEL- 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
                    V +          S     T+ LR  G + EM L 
Sbjct: 327 -------DSVDVLVFGQSP---SDVIKRTRELRKGGKKVEMALD 360


>gi|82597079|ref|XP_726530.1| CCAAT-box DNA binding protein subunit B [Plasmodium yoelii yoelii
           str. 17XNL]
 gi|23481971|gb|EAA18095.1| CCAAT-box DNA binding protein subunit B [Plasmodium yoelii yoelii]
          Length = 834

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 71/507 (14%), Positives = 147/507 (28%), Gaps = 73/507 (14%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            KK  L   + +G       + + R  + +  ++I  ++ +   + P+LE  +   K   
Sbjct: 53  NKKKNLVNSI-KGIRTFNQTQYKKREYLFNIWKDIARSFSYTFYDLPILENYEIFQK--- 108

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYV-----------AEN------------ 98
                    +     + + + LR ++T  L  Y+            +N            
Sbjct: 109 ---NNINEYYDFI-KNKRHLILRPEITPQLINYLFFKNERLKKKQEQNISTCKNNYNCNN 164

Query: 99  ---FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL 155
              +                    +      Q  +               ++        
Sbjct: 165 SHIYRQNNLKKLYSYQKKCRHKNDNQKQYKLQNFKKIFKMCTIGQCFRYEQISNYRKREH 224

Query: 156 EAVGIK---RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
               +     N+ +  I    IL    +++ L+  D + +          + K     + 
Sbjct: 225 YQWNMDIIGINNINAEIELFTILLTFFKQVKLYDKDIIIKINNKQIIKYIILKVFKNSLL 284

Query: 213 LLLGEGRTDNS-------------------GDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
               + + D                            N+   + + +  F +I    +  
Sbjct: 285 YYYSQKQIDKIIVKKILHILDKYNKISKYNFKLLLQKNIPFIKYNDITHFNNIIYNVNTF 344

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E  E+           N L  I    +K   ++   KI  + VRGL+YY   ++E     
Sbjct: 345 EDLEIFSNLNKYISNDNSLKNILSYFKKINLHT-YFKIDLSTVRGLDYYQNTIFEIFYKN 403

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +           ++ GGGRYD          +PA GF +G   +   L + E++ N I 
Sbjct: 404 KIN---------RAICGGGRYD---FILNKITIPAVGFGMGDVVISEILFNKENTCNLIN 451

Query: 374 EMGPV--LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           E   +      +   ++   +Y      LR   I+    L +       LK A+      
Sbjct: 452 ENINIVSFFPNIKLKNNKYKEYYDILHTLRINNIKIYTLLQNDLTLSKALKKANSLKSDY 511

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSR 458
            +     E       +K+L  G++   
Sbjct: 512 FLFCQENE--ENNFILKNLKTGRQQIV 536


>gi|94500517|ref|ZP_01307048.1| ATP phosphoribosyltransferase regulatory subunit [Oceanobacter sp.
           RED65]
 gi|94427307|gb|EAT12286.1| ATP phosphoribosyltransferase regulatory subunit [Oceanobacter sp.
           RED65]
          Length = 388

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 135/398 (33%), Gaps = 50/398 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E         ++ + +  +G++ +  P LE+ +SL   +  +       
Sbjct: 9   LPDGIEELLPPEANKLETTRRTLLDTFHRWGYELVVPPQLEFLESLLTGVGKDLNL--QT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + L  D+T  +AR  A +        R    G V           R  +
Sbjct: 67  FKVTDQLTGRMMGLSADITPQVARIDA-HSWPKEGINRLCYCGQVLHTRAESLISSRAPM 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E   ++ ++L++VGIK  + HI + +  I   ++ K        
Sbjct: 126 QIGAELFGEAGSQADIETLSLLIESLQSVGIK--NIHIDLGHVGIYQALVAKAD------ 177

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +  +  +  + L+   +   + ++ E   D +                 +  L ++  
Sbjct: 178 -FDDALNAQLFEHLNTKSVTEYRTMIDERVQDGA------------LKQAFLDLLELNGG 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E  + +      +   + L  I E ++   Y++  + +    +RG +Y+TG V+ A
Sbjct: 225 LDVLERAQSLNAVADVQASLDNLKEICEAIQAR-YSNVSLFLDLAELRGFDYHTGIVFAA 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                       P    ++  GGRYD   +          G +   +     LK      
Sbjct: 284 YT----------PGFGQALALGGRYDDTGA--------VFGRARSATGFSGDLKQWNRLI 325

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
               E     I         L         LR +G   
Sbjct: 326 EQQIETTEETIFA------PLGASWTVVTELRASGKTV 357


>gi|295676893|ref|YP_003605417.1| histidyl-tRNA synthetase 2 [Burkholderia sp. CCGE1002]
 gi|295436736|gb|ADG15906.1| histidyl-tRNA synthetase 2 [Burkholderia sp. CCGE1002]
          Length = 383

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 131/398 (32%), Gaps = 60/398 (15%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRHLLDRFRSYGYEMVMPPLLEYLESLLTGGGHDLNLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGNVAHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+      + + +  +L  ++E      +  
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALRLAGL--AKVRLDLCHAGVLAALIEAEPAAEE-- 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +     D L                 D        A  +    D + +  ++  +
Sbjct: 179 -----LGQALYDALAG--------------KDVPRLVEMTAQFSPVIRDALRALPTLYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S + E    +  + A  +  ++L  ++  V         + I    +RG  Y++G ++ 
Sbjct: 220 ASVLEEARARLPNSPAIARALDDLAFLASQVD-----GAEVMIDLADLRGYAYHSGVMFS 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA-TGFSIGISRLIVALKSLES 367
           A +            V  +V  GGRYD +   +            +     I  +++  S
Sbjct: 275 AYV----------DGVPNAVARGGRYDHVGQAYGRARAATGFSLDLREVARISPIEARSS 324

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYT-QMLRTAG 404
           +                       +        LR AG
Sbjct: 325 AILAPWRHD---------------EALRVAVAALRDAG 347


>gi|332235656|ref|XP_003267022.1| PREDICTED: eukaryotic translation initiation factor 2-alpha kinase 4
            [Nomascus leucogenys]
          Length = 1679

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 93/489 (19%), Positives = 173/489 (35%), Gaps = 69/489 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1091 AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1137

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1138 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1194

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  +      ++                           L  IL   G+  D      
Sbjct: 1195 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 1254

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
            +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 1255 IILYDAM--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1300

Query: 252  MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            M  +  L+K      +    G  +L  +  L++K G     IK+   I  G+ Y      
Sbjct: 1301 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGVVYKVQQHN 1355

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 1356 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 1415

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 1416 LNMEEPVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 1475

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                   +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 1476 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 1517

Query: 487  KILQENKEE 495
            + L+    +
Sbjct: 1518 QKLRTKVSD 1526


>gi|320321880|gb|EFW77976.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320331015|gb|EFW86989.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330872255|gb|EGH06404.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 395

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 145/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               A+L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDDVVAL--------------TADLPQELASMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      ++L+ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLAIAERLAAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGQ 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      +     + +        LR+ G R 
Sbjct: 327 AEIVLPSGG------IWVPDSTDAALWQMVCQLRSEGQRV 360


>gi|254787450|ref|YP_003074879.1| ATP phosphoribosyltransferase regulatory subunit [Teredinibacter
           turnerae T7901]
 gi|259709916|sp|C5BRH1|HISZ_TERTT RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|237683975|gb|ACR11239.1| ATP phosphoribosyltransferase regulatory subunit [Teredinibacter
           turnerae T7901]
          Length = 394

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 77/409 (18%), Positives = 143/409 (34%), Gaps = 49/409 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K  +    LP G ++    +      +   + ++++ +G++ + TP++E++DSL    
Sbjct: 1   MSKVDR--WLLPEGISELLPDDALQVETLRRRLVDVFQRWGYEYVITPMIEFTDSLLTGS 58

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             +       F L D   G+ + +R D+T   AR  A +        R    G V     
Sbjct: 59  GGDIDL--LTFKLTDQLTGKTLGIRADITPQAARMDA-HSLKRSGANRLCYAGHVVHTRP 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                 R  IQ  V+  G     AD E+  ++ + L  VG+     ++ I +  +   + 
Sbjct: 116 QVALGSRTPIQVGVELFGEPGLDADIEVISLLLEVLSLVGM--PKQYLDIGHVGVFRALT 173

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E  G   + +                     + LLL         D+        +    
Sbjct: 174 EAAGFSKEQE-------------------NTLFLLLQAKAATEIKDWVTTHVREPKLQHW 214

Query: 240 MVSFLSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +    +      +    ++     A      + +     V +  Y   ++    + +RG
Sbjct: 215 FLELPKLSGSAGVLDRARDVFADAPAEVMVALDELSSIADVVQPRYPDAQLYFDLSELRG 274

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             Y+TG V+ A            P V  ++  GGRYD +   F  +  PATGF+  +S +
Sbjct: 275 YHYHTGIVFGAF----------SPGVGNAIAKGGRYDHIGEAFG-RARPATGFAADLSVI 323

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
              L    +  N                S + +++Q   Q LR AG R 
Sbjct: 324 CRTLNVETAPPNPG---------VFAPASTNAAQWQEI-QSLREAGERV 362


>gi|330984556|gb|EGH82659.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 395

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 145/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HPLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               A+L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVVAL--------------TADLPQELATMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      ++L+ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLAIAERLAAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGQ 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      +     + +        LR+ G R 
Sbjct: 327 AEIVLPSGG------IWVPDSTDAALWQMVCQLRSEGQRV 360


>gi|10764161|gb|AAG22589.1| GCN2alpha [Mus musculus]
          Length = 1370

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 90/491 (18%), Positives = 183/491 (37%), Gaps = 63/491 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 777  FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 823

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
               D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C
Sbjct: 824  LFMDHSGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLEC 880

Query: 132  DVDNVGSSAETADA---EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              D V S+A ++      +  +     E   ++  +Y I +N+  +L  IL   G+  D 
Sbjct: 881  AFDIVTSTANSSLPTAETIYTIYEVIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDK 940

Query: 189  KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 +I+  A+                +             +L+S  +  +  F+    
Sbjct: 941  LSQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKG 986

Query: 249  EKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGC 305
            +  + +L   +   I  + G  +LV    + + +      ++ +   +   L   Y    
Sbjct: 987  D--LQDLTPTINSLIKQKTGIAQLVKYSLKDLEEVVGLLKKLGVKLQVSINLGLVYKVQQ 1044

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKS 364
                I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + +
Sbjct: 1045 HNGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQALGPVPTAVGVSIAIDKIFA 1104

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y 
Sbjct: 1105 AVLNMGEPVTVSSCDLLVVSAGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYC 1164

Query: 425  DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                     +    E S   +++K   K ++  +                 +  S+LV  
Sbjct: 1165 RHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDH 1206

Query: 485  VKKILQENKEE 495
            V + L+    +
Sbjct: 1207 VMQKLRTKVGD 1217


>gi|330965985|gb|EGH66245.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 395

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 147/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               ANL  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVVAL--------------TANLPQELASMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      ++L+ I++ +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLAIADRLAAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + + F  +  PATGFS  +  L+   ++   
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGADFG-RARPATGFSTDLKTLVTLGQAEIV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             +    M       +                LR+ G R 
Sbjct: 331 LPSGGIWMPDSTDAALWQQ----------VCQLRSEGQRV 360


>gi|330873781|gb|EGH07930.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 395

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 81/400 (20%), Positives = 151/400 (37%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               ANL  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVVAL--------------TANLPQELASMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      ++L+ I++ +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLAIADRLAAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + + F  +  PATGFS  +  L+   ++   
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGADFG-RARPATGFSTDLKTLVTLGQAEIV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
             +    M          DS   + +    Q LR+ G R 
Sbjct: 331 LPSGGIWMP---------DSTDAALWLQVCQ-LRSEGQRV 360


>gi|325295715|ref|YP_004282229.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325066163|gb|ADY74170.1| Prolyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 576

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 59/528 (11%), Positives = 134/528 (25%), Gaps = 80/528 (15%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  D     +++  +I   IR      G   +  P++  ++   +     D   K +  
Sbjct: 37  SGLYDILPLGVKVLLKIEKVIREEMNKAGAQEVILPIMHPAELWIES-GRWDVYGKEMIK 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK------HGPG 123
            +D   +  +L     ++   L R   +++  +      Y+IG  FR+E           
Sbjct: 96  FKDRHDRDYALGPTAEEMITDLVRKEVKSYKDLP--LNLYQIGRKFRDEIRPRFGLMRAR 153

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--IKRNDYHIGINNRKILDGILEK 181
            F              AE     M    +     +G   K  +   G    K     +  
Sbjct: 154 EFIMKDAYSFHASNEDAEREYWNMYETYSRIFRKMGLVFKAVEADTGEIGGKFSHEFMVI 213

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT----------DNSGDFTKGAN 231
                   +        A  +  +     V     E                 + +    
Sbjct: 214 ADTGEGKLVYCEKCGYAASTEKAEQKEPKVPESRKENFKSVEKVHTPDVKRIEEVSAFLG 273

Query: 232 LTSEQIDIMVSFLSIDLEKSMH----------ELYELVKGTIAGEKGFNELVVISELVRK 281
           ++ E I  ++ ++  +   ++           ++    KG+        E+   +   + 
Sbjct: 274 ISPENILKLLVYIVDEKPIAIAIRGDREVNELKVKNFFKGSKLRLATDEEIEKFTGQPKG 333

Query: 282 SGYNSNRIKISSTIVRGLEYYTGC-----------------VYEAILGFPVMNEKQKPVV 324
                            +                        +E          K +   
Sbjct: 334 FLSPVGLKIPVYADYSVVSMVNFVAGAGEKDYHLKNVNWERDFEVTEFVDFAEVKGEDPC 393

Query: 325 FGSVG---------------GGGRYDGLVSRFK------GQNVPATGFSIGISRLIVALK 363
                                G +Y   ++          + +    + IG++R++ A  
Sbjct: 394 PKCAAPLIEKRGIEVGHIFKLGTKYSQAMNATFVDEDGKEKPMVMGCYGIGVTRVMAAAV 453

Query: 364 SLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         I     ++I       + +   +     L+  G    +   +++  
Sbjct: 454 EQNYDENGIIWPVEIAPFEVIVIPVNVKKEEIIETAENIYDELQKNGFDVAIDDRNAR-P 512

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           G + K AD    P  II G      G+++IK    G+     +     
Sbjct: 513 GFKFKDADLIGIPYQIIVGKK-AGEGVVEIKVRKTGERFEIAVNKVVE 559


>gi|296158982|ref|ZP_06841810.1| histidyl-tRNA synthetase 2 [Burkholderia sp. Ch1-1]
 gi|295890857|gb|EFG70647.1| histidyl-tRNA synthetase 2 [Burkholderia sp. Ch1-1]
          Length = 383

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 75/398 (18%), Positives = 135/398 (33%), Gaps = 60/398 (15%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRHLLDRFRSYGYEMVMPPLLEYIESLLTGGGHDLNLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGNVAHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+      + + +  +L  ++E      +  
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALRLAGL--AKVRLDLCHAGVLAALIEAEPAAAE-- 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +     D L    +  +  L               ANLT    D + +  ++  +
Sbjct: 179 -----LGQSLYDALAGKDVPRLVEL--------------TANLTPAIRDALRALPTLYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S + E    +    A  +  ++L  ++  V         + I    +RG  Y++G ++ 
Sbjct: 220 ASVLDEARARLPNMPAIARALDDLAFLASQVD-----GAEVMIDLADLRGYAYHSGVMFS 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA-TGFSIGISRLIVALKSLES 367
           A +            V  +V  GGRYD +   +            +     I  +++  S
Sbjct: 275 AYV----------DGVPNAVARGGRYDHVGQAYGRARAATGFSLDLREVARISPVEARSS 324

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMY-TQMLRTAG 404
           +     +                 +        LR AG
Sbjct: 325 AILAPWQHD---------------EALRVSVAALRDAG 347


>gi|218960672|ref|YP_001740447.1| putative Histidine--tRNA ligase [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729329|emb|CAO80240.1| putative Histidine--tRNA ligase [Candidatus Cloacamonas
           acidaminovorans]
          Length = 426

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 62/457 (13%), Positives = 146/457 (31%), Gaps = 61/457 (13%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF------LPDEDRPNK 68
           F +    ++     + + +  +   + F  I   +L+ S  L           + D   K
Sbjct: 8   FHEFMPDKVWKWKILEEKVEKVLSLHDFQEIRLSVLQDSQVLQDGITALIQGQEADTAMK 67

Query: 69  GVFSLQDDDGQ--WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           GV SL   D Q   +SLR + T  +  + A          R Y  GP+FR   +   +  
Sbjct: 68  GVLSLSLPDDQLSLLSLRPEGTISVLHHTA-RITNPGEIHRFYYSGPMFRRINNQ--QQM 124

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN-NRKILDGILEKIGLH 185
           +F Q  V+ +GS +  ++ E+  +     + +G+      +         +     +  +
Sbjct: 125 EFYQLGVELLGSESILSENEVISLGMKLCKTLGLNEVRLDLNSYGCFTCRESFFSDLNKY 184

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            ++  +E                      L                 + ++   +  +L 
Sbjct: 185 LEEHKSEYCNSCY--------------RELSTNPFSQVHCANPDCKKSLQEGPHIYDYLC 230

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              +   +++ ++                            N+ K++  + +   YY   
Sbjct: 231 NSCKTDFNKVQKIQANL-----------------------GNQYKVNPNLNKNFAYYNKT 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V++ I                      RYD L +   G+ +PA GF + +  +   ++S 
Sbjct: 268 VFDFIAKHKGKEIIIGGGG--------RYDYLSALITGKRIPAVGFYLNLDSIFEIMESR 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                   E     +       +         Q L +  I+  +     +    ++  A 
Sbjct: 320 GLFEEKDPEFT---VYICAESPNLEMMTLQIVQELHSQQIKTIISPEC-RPAEKEIAIAK 375

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           +++CP+ +I        G + +++L K ++    +++
Sbjct: 376 KKDCPIMLILRDDNIREGKILLRNLVKEEQKYISLRD 412


>gi|154271490|ref|XP_001536598.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150409268|gb|EDN04718.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1436

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 83/504 (16%), Positives = 168/504 (33%), Gaps = 67/504 (13%)

Query: 13   RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            RG       E+ +++ + + + +I+  +G   IET     S    +     +    GV  
Sbjct: 830  RGTPSV--NEVLLQSLVKEKLSSIFRKHGA--IET---TRSSLFPRS----EHYPSGVVR 878

Query: 73   LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            L D  G  + L YDLT P AR ++    +I        +     +     G         
Sbjct: 879  LLDPSGNLVQLPYDLTLPNARSISRLDSSIEKTFTFGTVYRESIHGGAPRGHHEVDFDMI 938

Query: 133  VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              N    A      M ++     E   ++       IN+  +LD IL    +    K   
Sbjct: 939  SHNTLDLALKEAEVMKVLDEILNEFPSLRSAPMCFHINHSDLLDAILSFCRISPQQKPLV 998

Query: 193  RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            + I+ +    +  + +Q ++  L           +    + S  +D +  F   D     
Sbjct: 999  KEIISKL--NIGPYSIQKIRSELR----------SPTIGVASTSVDDLARFDFRDSP--- 1043

Query: 253  HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRGLEYYTGCVYEAIL 311
             +  + ++  + G +  + L  I   +          ++     V  L       +   +
Sbjct: 1044 DKALKRLRTIMEGTEFTDRLAPIFARLNAVVSYLKGFRVKRKVYVNPLSSLNDKFFRGSV 1103

Query: 312  GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFSIGISRLIV----- 360
             F  +++ ++  VF     GGRYD L+  F            A GF++G  +L +     
Sbjct: 1104 LFQCVSDTKRRDVF---AAGGRYDSLIQEFHPKVLYSGNQRHAVGFNLGWEKLYLSMSNY 1160

Query: 361  -------ALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLG 412
                    LK  E+  + I       +     D     +      Q L   GI AE+ + 
Sbjct: 1161 LKGSNKAFLKQGETEISGIWRSRRCDVLVASFDPAVLRTVGVGVVQDLWANGISAELSVD 1220

Query: 413  SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +S +    +      N    +I       RG +++K+++  +E         +W      
Sbjct: 1221 AS-SLEEIITRYRNDNHSWVVIVKQDSMERG-VKVKNISTKEEYEVRSSELAAW------ 1272

Query: 473  QITIPISELVSTVKKILQENKEEI 496
                    L++ ++  ++  +E +
Sbjct: 1273 --------LLNEIR--IRNQRERL 1286


>gi|123235427|emb|CAM24689.1| eukaryotic translation initiation factor 2 alpha kinase 4 [Mus
            musculus]
          Length = 1370

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 89/491 (18%), Positives = 181/491 (36%), Gaps = 63/491 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 777  FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 823

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
               D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C
Sbjct: 824  LFMDHSGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLEC 880

Query: 132  DVDNVGSSAETADA---EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              D V S+  ++      +  +     E   ++  +Y I +N+  +L  IL   G+  D 
Sbjct: 881  AFDIVTSTTNSSLPTAETIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDK 940

Query: 189  KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 +I+  A+                +             +L+S  +  +  F+    
Sbjct: 941  LSQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKG 986

Query: 249  EKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGC 305
            +  + +L   +   I  + G  +LV    + +        ++ +   +   L   Y    
Sbjct: 987  D--LQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQQ 1044

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKS 364
                I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + +
Sbjct: 1045 HTGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQTVGPVPTAVGVSIAIDKIFA 1104

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y 
Sbjct: 1105 AVLNMEEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYC 1164

Query: 425  DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                     +    E S   +++K   K ++  +                 +  S+LV  
Sbjct: 1165 RHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDH 1206

Query: 485  VKKILQENKEE 495
            V + L+    +
Sbjct: 1207 VMQKLRTKVGD 1217


>gi|39104539|dbj|BAC98144.2| mKIAA1338 protein [Mus musculus]
          Length = 1397

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 89/491 (18%), Positives = 182/491 (37%), Gaps = 63/491 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 804  FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 850

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
               D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C
Sbjct: 851  LFMDHSGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLEC 907

Query: 132  DVDNVGSSAETADA---EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              D V S+  ++      +  +     E   ++  +Y I +N+  +L  IL   G+  D 
Sbjct: 908  AFDIVTSTTNSSLPTAETIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDK 967

Query: 189  KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 +I+  A+                +             +L+S  +  +  F+    
Sbjct: 968  LSQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKG 1013

Query: 249  EKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGC 305
            +  + +L   +   I  + G  +LV    + +        ++ +   +   L   Y    
Sbjct: 1014 D--LQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQQ 1071

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKS 364
                I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + +
Sbjct: 1072 HTGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQTVGPVPTAVGVSIAIDKIFA 1131

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +  +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y 
Sbjct: 1132 VVLNMEEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYC 1191

Query: 425  DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                     +    E S   +++K   K ++  +                 +  S+LV  
Sbjct: 1192 RHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDH 1233

Query: 485  VKKILQENKEE 495
            V + L+    +
Sbjct: 1234 VMQKLRTKVGD 1244


>gi|331009768|gb|EGH89824.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 395

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 145/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               A+L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVVAL--------------TADLPQELATMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      ++L+ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLAIAERLAAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGQ 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      +     + +        LR+ G R 
Sbjct: 327 AEIVLPSGG------IWVPDSTDAALWQMVCQLRSEGQRV 360


>gi|300312248|ref|YP_003776340.1| ATP phosphoribosyltransferase regulatory subunit [Herbaspirillum
           seropedicae SmR1]
 gi|300075033|gb|ADJ64432.1| ATP phosphoribosyltransferase regulatory subunit protein
           [Herbaspirillum seropedicae SmR1]
          Length = 386

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 82/396 (20%), Positives = 143/396 (36%), Gaps = 53/396 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + +  YG++ +  PLLEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDNFRLYGYEMVMPPLLEYLESLLTGAGQDTDLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGVRADMTTQVARIDA-HLLNRASVTRLCYAGSVLHTRPTGLHATREPI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   ADAE+  +  ++L   G++     + + +  +L  I+          
Sbjct: 123 QIGAEIYGHAGLEADAEIQELALNSLALAGMR--TIRLDLCHVGVLRAII---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D   K     +  LL         + T  A         +++  ++  +
Sbjct: 171 ---------ANDAAAKRDEAQLFALLQAKDVPGLQEIT--ATYQEGTRAALLALPNLYGD 219

Query: 250 KSMHELYEL-VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S+     + +       +  +EL  + EL   +G+    + I    +RG  Y++G ++ 
Sbjct: 220 ISVIARARITLPALPGIAQALDELQALVEL--AAGHEGAAVTIDLADLRGYHYHSGVMFS 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P +  +V  GGRYD +   F  +  PATGFS+ +  L   +   E  
Sbjct: 278 AYV----------PGLPNAVVRGGRYDHVGEAFG-RARPATGFSLDLRELARLMPGAERK 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
              +             D+    K       LR AG
Sbjct: 327 RAILAPW--------GRDAGLREK----IAQLRQAG 350


>gi|66043843|ref|YP_233684.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. syringae B728a]
 gi|81308573|sp|Q4ZYX6|HISZ_PSEU2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|63254550|gb|AAY35646.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Pseudomonas syringae pv. syringae B728a]
 gi|330971559|gb|EGH71625.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 395

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 145/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               A+L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVIAL--------------TADLPQELATMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      ++L+ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLSIAERLAAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGQ 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      +     + +        LR+ G R 
Sbjct: 327 AEIVLPSGG------IWVPDSTDAALWQMVCQLRSEGQRV 360


>gi|301614949|ref|XP_002936943.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
            factor 2-alpha kinase 4 [Xenopus (Silurana) tropicalis]
          Length = 2470

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 82/443 (18%), Positives = 161/443 (36%), Gaps = 28/443 (6%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             R+ + + +++  I++ +G   +  PLL      GK   D    N       D  G  ++
Sbjct: 1081 ARLHHHVCEAVCRIFKRHGAVKLHAPLLMPR---GKAGFD----NSESACFMDHSGMLVT 1133

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L Y+L    AR+VA N    +   + Y I  VFR  K      ++  +C  D + S+A  
Sbjct: 1134 LPYNLRISFARFVARNN---ITSLKRYSIERVFRPRKLNRCHPKELTECAFDIITSAANC 1190

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNERLIVLRA 199
                   +                           L  IL   G+  D       I+  A
Sbjct: 1191 YLPIAETIYTIYEIIQEFPVLQERNYSIYVNHTSLLKAILLHCGVPEDKLTQVYNILYDA 1250

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
            + +         + +  +    +  + +   +     I+       ++         +  
Sbjct: 1251 MIEKLTK-----REVEAKFCNLSLSENSFQLSRLYRFIEQKGDLPDLEAMMVPLTKQKTG 1305

Query: 260  KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
             G +A ++G  +L  +  LV++ G    +I ++  +V  ++ ++G V++    F    ++
Sbjct: 1306 VGVLA-KQGLKDLEGVIGLVKRLGIKL-QIVVNFGLVYKMQQHSGIVFQ----FVAFIKR 1359

Query: 320  QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA--LKSLESSTNNIKEMGP 377
            ++  V   +  GGRYD L+S+F+G    A G    +   I    + +  S+         
Sbjct: 1360 RQRTVPEILAAGGRYDHLISQFRGPQTGAMGLPCAVGVSIAIDKISAALSTAEEHVSXIS 1419

Query: 378  VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
              +  +     SL++    TQ L  AGI AE+    S++      Y        A I   
Sbjct: 1420 CDLLVVSAGQMSLNRAIGITQKLWAAGITAEIMYEWSESQDELQDYCKCSGISYAAIISD 1479

Query: 438  GERSRGMLQIKDLAKGKELSREI 460
             E     +++K   K ++  + I
Sbjct: 1480 KE--GNHIKLKTFEKERQSEKRI 1500


>gi|210630867|ref|ZP_03296641.1| hypothetical protein COLSTE_00526 [Collinsella stercoris DSM 13279]
 gi|210160301|gb|EEA91272.1| hypothetical protein COLSTE_00526 [Collinsella stercoris DSM 13279]
          Length = 589

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 6/169 (3%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           PRGF D    E  +R  I+ +++    ++G+ PIETPL+E +   G      D P    F
Sbjct: 5   PRGFRDILPDEAEMREHIVATVKARLVHHGYRPIETPLIESASVGGANAWSSDAP----F 60

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           +L DD+G  +++R D T  +   +A        P R     PV R +  G  + RQF Q 
Sbjct: 61  NLFDDNGALLAVRPDNTTSVVHAIAARMSERDLPLRLRYEAPVVRQQPRGTAQARQFTQL 120

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             + VG   + ADAEM ++ A+ L+ +G+       G         +LE
Sbjct: 121 GYELVGEGGDAADAEMTLIAAEALDDLGLNSWQLVCGSVVP--YQALLE 167


>gi|330951478|gb|EGH51738.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae Cit 7]
          Length = 395

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 73/400 (18%), Positives = 145/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L  +              L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVIALTPD--------------LPPELAAMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      ++L+ I+E +  + +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLSIAERL-ATRFPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGQ 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      +     + +        LR+ G R 
Sbjct: 327 AEIVLPSGG------IWVPDSTDAALWQMVCQLRSEGQRV 360


>gi|123235426|emb|CAM24688.1| eukaryotic translation initiation factor 2 alpha kinase 4 [Mus
            musculus]
          Length = 1527

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 81/490 (16%), Positives = 165/490 (33%), Gaps = 61/490 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 934  FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 980

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENF--DTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
               D  G  + L +DL  P ARYVA N   +   +                       F 
Sbjct: 981  LFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFRPRKLDRFHPKELLECAFD 1040

Query: 130  QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                    S            +     A+  +  +Y I +N+  +L  IL   G+  D  
Sbjct: 1041 IVTSTTNSSLPTAETIYTIYEIIQEFPAL--QERNYSIYLNHTMLLKAILLHCGIPEDKL 1098

Query: 190  LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +I+  A+                +             +L+S  +  +  F+    +
Sbjct: 1099 SQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGD 1144

Query: 250  KSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGCV 306
              + +L   +   I  + G  +LV    + +        ++ +   +   L   Y     
Sbjct: 1145 --LQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQQH 1202

Query: 307  YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSL 365
               I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + + 
Sbjct: 1203 TGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQTVGPVPTAVGVSIAIDKIFAA 1262

Query: 366  ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y  
Sbjct: 1263 VLNMEEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCR 1322

Query: 426  RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                    +    E S   +++K   K ++  +                 +  S+LV  V
Sbjct: 1323 HHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDHV 1364

Query: 486  KKILQENKEE 495
             + L+    +
Sbjct: 1365 MQKLRTKVGD 1374


>gi|295317391|ref|NP_001171277.1| eukaryotic translation initiation factor 2-alpha kinase 4 isoform 2
            [Mus musculus]
          Length = 1536

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 89/491 (18%), Positives = 181/491 (36%), Gaps = 63/491 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 943  FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 989

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
               D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C
Sbjct: 990  LFMDHSGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLEC 1046

Query: 132  DVDNVGSSAETADA---EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              D V S+  ++      +  +     E   ++  +Y I +N+  +L  IL   G+  D 
Sbjct: 1047 AFDIVTSTTNSSLPTAETIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDK 1106

Query: 189  KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 +I+  A+                +             +L+S  +  +  F+    
Sbjct: 1107 LSQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKG 1152

Query: 249  EKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGC 305
            +  + +L   +   I  + G  +LV    + +        ++ +   +   L   Y    
Sbjct: 1153 D--LQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQQ 1210

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKS 364
                I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + +
Sbjct: 1211 HTGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQTVGPVPTAVGVSIAIDKIFA 1270

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y 
Sbjct: 1271 AVLNMEEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYC 1330

Query: 425  DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                     +    E S   +++K   K ++  +                 +  S+LV  
Sbjct: 1331 RHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDH 1372

Query: 485  VKKILQENKEE 495
            V + L+    +
Sbjct: 1373 VMQKLRTKVGD 1383


>gi|49117755|gb|AAH72637.1| Eif2ak4 protein [Mus musculus]
          Length = 1536

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 89/491 (18%), Positives = 181/491 (36%), Gaps = 63/491 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 943  FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 989

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
               D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C
Sbjct: 990  LFMDHSGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLEC 1046

Query: 132  DVDNVGSSAETADA---EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              D V S+  ++      +  +     E   ++  +Y I +N+  +L  IL   G+  D 
Sbjct: 1047 AFDIVTSTTNSSLPTAETIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDK 1106

Query: 189  KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 +I+  A+                +             +L+S  +  +  F+    
Sbjct: 1107 LSQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKG 1152

Query: 249  EKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGC 305
            +  + +L   +   I  + G  +LV    + +        ++ +   +   L   Y    
Sbjct: 1153 D--LQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQQ 1210

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKS 364
                I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + +
Sbjct: 1211 HTGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQTVGPVPTAVGVSIAIDKIFA 1270

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y 
Sbjct: 1271 AVLNMEEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYC 1330

Query: 425  DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                     +    E S   +++K   K ++  +                 +  S+LV  
Sbjct: 1331 RHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDH 1372

Query: 485  VKKILQENKEE 495
            V + L+    +
Sbjct: 1373 VMQKLRTKVGD 1383


>gi|289623760|ref|ZP_06456714.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289648623|ref|ZP_06479966.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|330865898|gb|EGH00607.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 395

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 146/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               A+L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVVAL--------------TADLPQELATMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      ++L+ I+E +  S +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLAIAERL-ASRFPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGQ 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      +     + +        LR+ G R 
Sbjct: 327 AEIVLPSGG------IWVPDSTDAALWQMVCQLRSEGQRV 360


>gi|291403250|ref|XP_002718031.1| PREDICTED: eukaryotic translation initiation factor 2 alpha kinase 4
            [Oryctolagus cuniculus]
          Length = 1651

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 95/489 (19%), Positives = 172/489 (35%), Gaps = 69/489 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +I+  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1063 AKIQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1109

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1110 SGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1166

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  ++     ++                           L  IL   G+  D      
Sbjct: 1167 TSTTNSSLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 1226

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
            +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 1227 VILCDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1272

Query: 252  MHELYELVKG----TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            M  +  L+K     +   + G  EL  +  L++K G     +K+   I  GL Y      
Sbjct: 1273 MPTINSLIKQKTGVSQLVKYGLKELEEVVGLLKKLG-----VKLQVFINLGLVYKVQQHN 1327

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F     +++  V   +  GGRYD L+ +F+G         +IG S  I  + +  
Sbjct: 1328 GIIFQFVAFIRRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGASIAIDKISTAV 1387

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 1388 LNMEEPATVSSCDLLVVSVGQMSMSRAIHLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 1447

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                   +    E S   +++K   K ++  +                 +  S+LV  V 
Sbjct: 1448 HEITCVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDHVV 1489

Query: 487  KILQENKEE 495
              L+    +
Sbjct: 1490 HKLRTKVSD 1498


>gi|330960085|gb|EGH60345.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 395

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 148/400 (37%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPNRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+    +  D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--AEVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               A+L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVIAL--------------TADLPQELASMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      ++L+ I++ +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLAIADRLAAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGQ 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G   I   D    +L +       LR+ G R 
Sbjct: 327 AEIVLPSGG---IWVPDSTDAALWQR---VCQLRSEGQRV 360


>gi|123235425|emb|CAM24687.1| eukaryotic translation initiation factor 2 alpha kinase 4 [Mus
            musculus]
          Length = 1570

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 81/490 (16%), Positives = 165/490 (33%), Gaps = 61/490 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 977  FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 1023

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENF--DTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
               D  G  + L +DL  P ARYVA N   +   +                       F 
Sbjct: 1024 LFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFRPRKLDRFHPKELLECAFD 1083

Query: 130  QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                    S            +     A+  +  +Y I +N+  +L  IL   G+  D  
Sbjct: 1084 IVTSTTNSSLPTAETIYTIYEIIQEFPAL--QERNYSIYLNHTMLLKAILLHCGIPEDKL 1141

Query: 190  LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +I+  A+                +             +L+S  +  +  F+    +
Sbjct: 1142 SQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGD 1187

Query: 250  KSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGCV 306
              + +L   +   I  + G  +LV    + +        ++ +   +   L   Y     
Sbjct: 1188 --LQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQQH 1245

Query: 307  YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSL 365
               I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + + 
Sbjct: 1246 TGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQTVGPVPTAVGVSIAIDKIFAA 1305

Query: 366  ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y  
Sbjct: 1306 VLNMEEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCR 1365

Query: 426  RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                    +    E S   +++K   K ++  +                 +  S+LV  V
Sbjct: 1366 HHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDHV 1407

Query: 486  KKILQENKEE 495
             + L+    +
Sbjct: 1408 MQKLRTKVGD 1417


>gi|320334745|ref|YP_004171456.1| ATP phosphoribosyltransferase regulatory subunit [Deinococcus
           maricopensis DSM 21211]
 gi|319756034|gb|ADV67791.1| ATP phosphoribosyltransferase regulatory subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 373

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 133/424 (31%), Gaps = 66/424 (15%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D    E   R  +   +   +  +G+  +E P LE+ D            +   
Sbjct: 3   TPDGTRDVLPPEWAWREHLRSRLHAYFGAFGYQGVELPALEFQD-------HAHPQDARA 55

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF-RNEKHGPGRFRQFI 129
           F L D DG+ ++LR + T  + R V   F    FP R    G ++ R +    GR R+F 
Sbjct: 56  FKLIDRDGRVLALRSEFTTAVLRLVRSRFPDGPFPLRLQYGGRLWLRAQASELGRLREFA 115

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   + VG     ADAE+ ++    L+ +G++     + + +   +D  LE  G+ G+ +
Sbjct: 116 QVGAELVGVDTPHADAELLLVAGGALKDLGVRA---RLEVGHPGFVDATLEDAGITGEAR 172

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              + +   L      +     +   L+++   ++ +   +   
Sbjct: 173 -------------------EALHAALDRKSGPDVARLARLHGLSADVQRVLNALPDLYGG 213

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +      +            L  I        Y  + +     + R   YY+G  + A
Sbjct: 214 AEVLADARRLAHGERARAAVERLTRI-----ADLYGDDTLLFDLGMSRRYGYYSGFTFRA 268

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                         V   + GGGRY               G  +  +   V L+ L    
Sbjct: 269 YA----------DGVNRQILGGGRYHDAAH----------GTGLAGAGFAVGLERLTEVA 308

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
             +       +   D    + +            G+  E+            +YA  R  
Sbjct: 309 ARLMPPPVETVLAYDAHGAAFAHA---------QGLTVELAWTEDPLALA--RYARARGI 357

Query: 430 PLAI 433
              +
Sbjct: 358 RRVV 361


>gi|50949487|emb|CAH10626.1| hypothetical protein [Homo sapiens]
          Length = 1426

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 94/489 (19%), Positives = 173/489 (35%), Gaps = 69/489 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 838  AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 884

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 885  SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 941

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  +      ++                           L  IL   G+  D      
Sbjct: 942  TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 1001

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
            +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 1002 IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1047

Query: 252  MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 1048 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 1102

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 1103 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 1162

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 1163 LNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 1222

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                   +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 1223 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 1264

Query: 487  KILQENKEE 495
            + L+    +
Sbjct: 1265 QKLRTKVTD 1273


>gi|10764165|gb|AAG22591.1| GCN2gamma [Mus musculus]
          Length = 1570

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 90/491 (18%), Positives = 183/491 (37%), Gaps = 63/491 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 977  FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 1023

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
               D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C
Sbjct: 1024 LFMDHSGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLEC 1080

Query: 132  DVDNVGSSAETADA---EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              D V S+A ++      +  +     E   ++  +Y I +N+  +L  IL   G+  D 
Sbjct: 1081 AFDIVTSTANSSLPTAETIYTIYEVIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDK 1140

Query: 189  KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 +I+  A+                +             +L+S  +  +  F+    
Sbjct: 1141 LSQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKG 1186

Query: 249  EKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGC 305
            +  + +L   +   I  + G  +LV    + + +      ++ +   +   L   Y    
Sbjct: 1187 D--LQDLTPTINSLIKQKTGIAQLVKYSLKDLEEVVGLLKKLGVKLQVSINLGLVYKVQQ 1244

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKS 364
                I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + +
Sbjct: 1245 HNGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQALGPVPTAVGVSIAIDKIFA 1304

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y 
Sbjct: 1305 AVLNMGEPVTVSSCDLLVVSAGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYC 1364

Query: 425  DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                     +    E S   +++K   K ++  +                 +  S+LV  
Sbjct: 1365 RHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDH 1406

Query: 485  VKKILQENKEE 495
            V + L+    +
Sbjct: 1407 VMQKLRTKVGD 1417


>gi|166851838|ref|NP_038747.2| eukaryotic translation initiation factor 2-alpha kinase 4 isoform 1
            [Mus musculus]
 gi|123235424|emb|CAM24686.1| eukaryotic translation initiation factor 2 alpha kinase 4 [Mus
            musculus]
          Length = 1648

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 81/490 (16%), Positives = 165/490 (33%), Gaps = 61/490 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 1055 FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 1101

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENF--DTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
               D  G  + L +DL  P ARYVA N   +   +                       F 
Sbjct: 1102 LFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFRPRKLDRFHPKELLECAFD 1161

Query: 130  QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                    S            +     A+  +  +Y I +N+  +L  IL   G+  D  
Sbjct: 1162 IVTSTTNSSLPTAETIYTIYEIIQEFPAL--QERNYSIYLNHTMLLKAILLHCGIPEDKL 1219

Query: 190  LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +I+  A+                +             +L+S  +  +  F+    +
Sbjct: 1220 SQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGD 1265

Query: 250  KSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGCV 306
              + +L   +   I  + G  +LV    + +        ++ +   +   L   Y     
Sbjct: 1266 --LQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQQH 1323

Query: 307  YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSL 365
               I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + + 
Sbjct: 1324 TGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQTVGPVPTAVGVSIAIDKIFAA 1383

Query: 366  ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y  
Sbjct: 1384 VLNMEEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCR 1443

Query: 426  RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                    +    E S   +++K   K ++  +                 +  S+LV  V
Sbjct: 1444 HHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDHV 1485

Query: 486  KKILQENKEE 495
             + L+    +
Sbjct: 1486 MQKLRTKVGD 1495


>gi|61213023|sp|Q9QZ05|E2AK4_MOUSE RecName: Full=Eukaryotic translation initiation factor 2-alpha kinase
            4; AltName: Full=GCN2-like protein; Short=mGCN2
          Length = 1648

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 81/490 (16%), Positives = 165/490 (33%), Gaps = 61/490 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 1055 FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 1101

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENF--DTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
               D  G  + L +DL  P ARYVA N   +   +                       F 
Sbjct: 1102 LFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFRPRKLDRFHPKELLECAFD 1161

Query: 130  QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                    S            +     A+  +  +Y I +N+  +L  IL   G+  D  
Sbjct: 1162 IVTSTTNSSLPTAETIYTIYEIIQEFPAL--QERNYSIYLNHTMLLKAILLHCGIPEDKL 1219

Query: 190  LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +I+  A+                +             +L+S  +  +  F+    +
Sbjct: 1220 SQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGD 1265

Query: 250  KSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGCV 306
              + +L   +   I  + G  +LV    + +        ++ +   +   L   Y     
Sbjct: 1266 --LQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQQH 1323

Query: 307  YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSL 365
               I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + + 
Sbjct: 1324 TGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQTVGPVPTAVGVSIAIDKIFAA 1383

Query: 366  ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y  
Sbjct: 1384 VLNMEEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCR 1443

Query: 426  RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                    +    E S   +++K   K ++  +                 +  S+LV  V
Sbjct: 1444 HHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDHV 1485

Query: 486  KKILQENKEE 495
             + L+    +
Sbjct: 1486 MQKLRTKVGD 1495


>gi|254481020|ref|ZP_05094266.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [marine gamma proteobacterium HTCC2148]
 gi|41582275|gb|AAS07889.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [uncultured marine bacterium 463]
 gi|214038815|gb|EEB79476.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [marine gamma proteobacterium HTCC2148]
          Length = 388

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 72/395 (18%), Positives = 144/395 (36%), Gaps = 38/395 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +LP G  +    +     ++   + +++ ++G++ +  PL+E++DSL   L  +    
Sbjct: 6   RWQLPDGIEEVLPAQAATVEQLRRRLLDMFRSWGYELVIPPLVEFTDSLLSGLGQDLDL- 64

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              F L D   G+ + +R D+T  +AR  A +        R    G             R
Sbjct: 65  -LTFKLTDQLSGRSMGVRADITPQVARIDA-HSLAPEGVSRLCYAGSTLHTRPKSLMASR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
             IQ   +  G  +  AD E+  +M  TL+A  +    Y + + +  + + +L    L  
Sbjct: 123 SPIQLGAELYGDDSLAADVEVIRLMLATLDAAELDAA-YTLDLGHVGVYEAVLATADLDE 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +           D L +  +  + L L     D +       +L  +           
Sbjct: 182 AQEA-------AIFDCLQRKSVPDLLLALDNVPEDIATLIIGLVDLHGD----------- 223

Query: 247 DLEKSMHELYELVKG-TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             ++ +    EL            + L  ++  +R        I      +RG  Y+TG 
Sbjct: 224 --DEVLVAARELFADRVPQALIAVDALQDVATDIR-RQCPDLSIYFDLAELRGYHYHTGI 280

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+ A +          P    ++  GGRY+G+   F  ++ PATGF+  +  L+  L + 
Sbjct: 281 VFAAYV----------PGRGQALANGGRYNGVGEVFG-RSRPATGFATDLKSLMGLLPAT 329

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           +     I       +  +   +   ++ ++    L
Sbjct: 330 QERQGAISIPDSDDLELLAKVAQLRAEGEIVINNL 364


>gi|70734074|ref|YP_257714.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           fluorescens Pf-5]
 gi|109892441|sp|Q4KJ69|HISZ_PSEF5 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|68348373|gb|AAY95979.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 395

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 144/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGQDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLRREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+ +  GL G  +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLAQAAGLSGAVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L +  +  V  L                 L ++  D++ S + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVISLTE--------------GLPADLADMLRSLVDLCGS 222

Query: 250 KSM--HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           + +       L     +     +EL+ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLGDARRRLAGAPTSVLLALDELLTIAERLS-VRFPDLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGR 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      +    ++ +        LR+ G R 
Sbjct: 327 AEVELPSGG------IWMPDNTDAALWQTVCRLRSEGQRV 360


>gi|10764163|gb|AAG22590.1| GCN2beta [Mus musculus]
          Length = 1648

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 90/491 (18%), Positives = 183/491 (37%), Gaps = 63/491 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 1055 FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 1101

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
               D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C
Sbjct: 1102 LFMDHSGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLEC 1158

Query: 132  DVDNVGSSAETADA---EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              D V S+A ++      +  +     E   ++  +Y I +N+  +L  IL   G+  D 
Sbjct: 1159 AFDIVTSTANSSLPTAETIYTIYEVIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDK 1218

Query: 189  KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 +I+  A+                +             +L+S  +  +  F+    
Sbjct: 1219 LSQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKG 1264

Query: 249  EKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGC 305
            +  + +L   +   I  + G  +LV    + + +      ++ +   +   L   Y    
Sbjct: 1265 D--LQDLTPTINSLIKQKTGIAQLVKYSLKDLEEVVGLLKKLGVKLQVSINLGLVYKVQQ 1322

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKS 364
                I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + +
Sbjct: 1323 HNGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQALGPVPTAVGVSIAIDKIFA 1382

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y 
Sbjct: 1383 AVLNMGEPVTVSSCDLLVVSAGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYC 1442

Query: 425  DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                     +    E S   +++K   K ++  +                 +  S+LV  
Sbjct: 1443 RHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDH 1484

Query: 485  VKKILQENKEE 495
            V + L+    +
Sbjct: 1485 VMQKLRTKVGD 1495


>gi|152980114|ref|YP_001353808.1| ATP phosphoribosyltransferase regulatory subunit [Janthinobacterium
           sp. Marseille]
 gi|166219831|sp|A6SZW1|HISZ_JANMA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|151280191|gb|ABR88601.1| ATP phosphoribosyltransferase regulatory subunit [Janthinobacterium
           sp. Marseille]
          Length = 383

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 87/442 (19%), Positives = 152/442 (34%), Gaps = 67/442 (15%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   I + +  YG++ +  P+LEY DSL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRVILDNFHLYGYELVMPPMLEYLDSLLAGAGHDMDLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V     +G    R+ +
Sbjct: 64  FKLVDQLSGRTLGLRADMTTQVARIDA-HLLNRASVTRLCYSGSVLHTRPNGLHATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   ADAE+  +   +L   G       + + +  +L  I+E         
Sbjct: 123 QIGAEIYGHAGLEADAEIQELALASLALAGFT--QVRLDLCHVGVLRAIIE--------- 171

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D   +     +  LL         + T       E    +++  S+  +
Sbjct: 172 ----------NDANAQKDESALYTLLRAKDVPALQEITAAYG--EESRRALLALPSLYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +    + +       +  +EL  ++ L          + I    + G +Y +G ++ 
Sbjct: 220 ATVLTRARKELPALPGITRALDELAALTSLA-----GEANVTIDLADLGGYQYESGAMFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +          P +  +V  GGRYD +   F  +  PATGFS+ +  L   L   E  
Sbjct: 275 IYV----------PGLPNAVARGGRYDHVGEAFG-RARPATGFSMDLRELARLLPVAERK 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                              ++L + ++    LR AG      L   +N  +Q    D   
Sbjct: 324 RAIRAPW----------GREALLRSKIVA--LRKAGEVVIQSLPGYEN--DQ----DEFE 365

Query: 429 CPLAIIQGTGERSRGMLQIKDL 450
           C   ++        G   IK+L
Sbjct: 366 CDRVLV-----LEDGNWIIKNL 382


>gi|46395606|sp|O30548|HISZ_PSEST RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|2459964|gb|AAC46133.1| HisX [Pseudomonas stutzeri]
          Length = 395

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 136/404 (33%), Gaps = 47/404 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++ +G++ + TP +E+ +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIETARRRVLDLFQRWGYELVITPHVEFLESLLSGSGQDLDLK--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + LR D+T  +AR V  +      P R    G V   +       R  I
Sbjct: 67  FKVIDPLSGRQMGLRADITPQVAR-VDAHTLRREGPSRLCYAGSVLHAKPRALATSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G S+ ++D E+  +M + LE       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDSSTSSDIEVISLMLEMLEL--AMVPDVHMDLGHVGIYRGLARAAGLSGEAE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 + R                      D   + T     +   +   ++ L    E
Sbjct: 184 QRLFDAMQR-------------------KAMDEIAELTATVEPSLAAMLQALARLCGGRE 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                   L +      +    L+ I++ +    Y    +      +RG  Y+TG V+  
Sbjct: 225 TLDAARRVLAEAPAPVTEALEALIRIADQL-ALRYPDLPLYFDLGELRGYHYHTGVVFAV 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +          P V  S+  GGRYD + +     +      + G S  +  L SL    
Sbjct: 284 FV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVSLGK-- 326

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
             +      +      D+    +       LR  G R    L  
Sbjct: 327 AELDSRLSGIWAPYGDDTALWQQ----ISRLRREGERVVQALDG 366


>gi|167045636|gb|ABZ10285.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine microorganism HF4000_APKG10K24]
          Length = 407

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 77/393 (19%), Positives = 138/393 (35%), Gaps = 25/393 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D      R +  + D +  +  ++G+  +ETP+LE +D   +           ++S 
Sbjct: 17  GMKDLSQDAWRTKRDLQDRLGELIGSFGYRHLETPILEPTDLFLRKSGGA--LASKIYSF 74

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D     +SLR + T+ + R+  E  D    P R    GPVFR E   P    QF Q   
Sbjct: 75  TDPGSNSVSLRPEFTSSIMRHYLECADATQLPVRWQYSGPVFRYEVSHPEANGQFTQIGA 134

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           + +GSS  TADAE+  + A  L     +  D+ + + +  +L+ +L+ +G+    +    
Sbjct: 135 ELLGSSGITADAEVLGLAAQVLSK--AEVADWRLQLADLDVLNSVLDAVGVSERARNFII 192

Query: 194 LIVLRAIDKLDKFG---LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV--------- 241
             V +             +  +L L E   +          L   Q  +++         
Sbjct: 193 DNVPKLKQGHQVIPQVLEEAHRLHLTEQYANEDYLVEAVQGLDDSQARVVLRGLLKWNAA 252

Query: 242 -SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                   E+ +  L   ++G+  G      L + S+L    G     +     +VR   
Sbjct: 253 DQLGQRSAEEVVDRLLRKLRGSDEGRTLERGLELASDLAAIRGEPKEALAGVEAVVRESG 312

Query: 301 YYTGCVYE------AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP-ATGFSI 353
                 +E       ++           + FG V G   Y+G+V      + P + G   
Sbjct: 313 AKPE-AFERLSQLLTLVLSDPTIGDHLELDFGLVRGLAYYNGIVFEVTHSSWPESLGGGG 371

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
               L  AL S +             + T+   
Sbjct: 372 RYDGLAKALGSRDIVPALGFAYNLEALLTVGKG 404


>gi|7243057|dbj|BAA92576.1| KIAA1338 protein [Homo sapiens]
          Length = 1495

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 94/489 (19%), Positives = 173/489 (35%), Gaps = 69/489 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 907  AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 953

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 954  SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1010

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  +      ++                           L  IL   G+  D      
Sbjct: 1011 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 1070

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
            +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 1071 IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1116

Query: 252  MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 1117 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 1171

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 1172 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 1231

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 1232 LNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 1291

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                   +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 1292 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 1333

Query: 487  KILQENKEE 495
            + L+    +
Sbjct: 1334 QKLRTKVTD 1342


>gi|187924508|ref|YP_001896150.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           phytofirmans PsJN]
 gi|229464970|sp|B2SXS0|HISZ_BURPP RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|187715702|gb|ACD16926.1| tRNA synthetase class II (G H P and S) [Burkholderia phytofirmans
           PsJN]
          Length = 383

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 75/398 (18%), Positives = 135/398 (33%), Gaps = 60/398 (15%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRHLLDRFRSYGYEMVMPPLLEYIESLLTGGGHDLNLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGNVAHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+      + + +  +L  ++E      +  
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALRLAGL--AKVRLDLCHAGVLAALIEAEPAAAE-- 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +     D L    +  +  L               ANLT    D + +  ++  +
Sbjct: 179 -----LGQSLYDALAGKDVPRLVEL--------------TANLTPVIRDALRALPTLYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S + E    +    A  +  ++L  ++  V         + I    +RG  Y++G ++ 
Sbjct: 220 ASVLDEARARLPNAPAIARALDDLAFLASQVE-----GAEVMIDLADLRGYAYHSGVMFS 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA-TGFSIGISRLIVALKSLES 367
           A +            V  +V  GGRYD +   +            +     I  +++  S
Sbjct: 275 AYV----------DGVPNAVARGGRYDHVGQAYGRARAATGFSLDLREVARISPVEARSS 324

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMY-TQMLRTAG 404
           +     +                 +        LR AG
Sbjct: 325 AILAPWQHD---------------EALRVSVAALRDAG 347


>gi|6066585|emb|CAB58363.1| GCN2 eIF2alpha kinase [Mus musculus]
          Length = 1648

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 81/490 (16%), Positives = 166/490 (33%), Gaps = 61/490 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 1055 FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 1101

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENF--DTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
               D  G  + L +DL  P ARYVA N   +   +                       F 
Sbjct: 1102 LFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFRPRKLDRFHPKELLECAFD 1161

Query: 130  QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                    S            +     A+  +  +Y I +N+  +L  IL   G+  D  
Sbjct: 1162 IVTSTTNSSLPTAETIYTIYEIIQEFPAL--QERNYSIYLNHTMLLKAILLHCGIPEDKL 1219

Query: 190  LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +I+  A+                +             +L+S  +  +  F+    +
Sbjct: 1220 SQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGD 1265

Query: 250  KSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGCV 306
              + +L   +   I  + G  +LV    + +        ++ +   +   L   Y     
Sbjct: 1266 --LQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQQH 1323

Query: 307  YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSL 365
               I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + ++
Sbjct: 1324 TGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQTVGPVPTAVGVSIAIDKIFAV 1383

Query: 366  ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y  
Sbjct: 1384 VLNMEEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCR 1443

Query: 426  RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                    +    E S   +++K   K ++  +                 +  S+LV  V
Sbjct: 1444 HHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDHV 1485

Query: 486  KKILQENKEE 495
             + L+    +
Sbjct: 1486 MQKLRTKVGD 1495


>gi|114656312|ref|XP_510296.2| PREDICTED: eukaryotic translation initiation factor 2 alpha kinase 4
            isoform 5 [Pan troglodytes]
          Length = 1378

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 94/489 (19%), Positives = 173/489 (35%), Gaps = 69/489 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 790  AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 836

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 837  SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 893

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  +      ++                           L  IL   G+  D      
Sbjct: 894  TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 953

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
            +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 954  IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 999

Query: 252  MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 1000 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 1054

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 1055 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 1114

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 1115 LNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 1174

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                   +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 1175 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 1216

Query: 487  KILQENKEE 495
            + L+    +
Sbjct: 1217 QKLRTKVTD 1225


>gi|148695960|gb|EDL27907.1| eukaryotic translation initiation factor 2 alpha kinase 4 [Mus
            musculus]
          Length = 1648

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 89/491 (18%), Positives = 182/491 (37%), Gaps = 63/491 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 1055 FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 1101

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
               D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C
Sbjct: 1102 LFMDHSGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLEC 1158

Query: 132  DVDNVGSSAETADA---EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              D V S+  ++      +  +     E   ++  +Y I +N+  +L  IL   G+  D 
Sbjct: 1159 AFDIVTSTTNSSLPTAETIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDK 1218

Query: 189  KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 +I+  A+                +             +L+S  +  +  F+    
Sbjct: 1219 LSQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKG 1264

Query: 249  EKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGC 305
            +  + +L   +   I  + G  +LV    + +        ++ +   +   L   Y    
Sbjct: 1265 D--LQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQQ 1322

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKS 364
                I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + +
Sbjct: 1323 HTGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQTVGPVPTAVGVSIAIDKIFA 1382

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +  +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y 
Sbjct: 1383 VVLNMEEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYC 1442

Query: 425  DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                     +    E S   +++K   K ++  +                 +  S+LV  
Sbjct: 1443 RHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDH 1484

Query: 485  VKKILQENKEE 495
            V + L+    +
Sbjct: 1485 VMQKLRTKVGD 1495


>gi|309319799|ref|NP_001099214.2| eukaryotic translation initiation factor 2-alpha kinase 4 [Rattus
            norvegicus]
 gi|149022963|gb|EDL79857.1| eukaryotic translation initiation factor 2 alpha kinase 4
            (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 1649

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 90/491 (18%), Positives = 183/491 (37%), Gaps = 63/491 (12%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
               +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 1056 FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 1102

Query: 73   -LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
               D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C
Sbjct: 1103 LFMDHSGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLEC 1159

Query: 132  DVDNVGSSAETADA---EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              D V S+A ++      +  +     E   ++  +Y I +N+  +L  IL   G+  D 
Sbjct: 1160 AFDIVTSTANSSLPTAETIYTIYEVIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDK 1219

Query: 189  KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 +I+  A+                +             +L+S  +  +  F+    
Sbjct: 1220 LSQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKG 1265

Query: 249  EKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGC 305
            +  + +L   +   I  + G  +LV    + + +      ++ +   +   L   Y    
Sbjct: 1266 D--LQDLTPTINSLIKQKTGIAQLVKYSLKDLEEVVGLLKKLGVKLQVSINLGLVYKVQQ 1323

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKS 364
                I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I  + +
Sbjct: 1324 HNGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQALGPVPTAVGVSIAIDKIFA 1383

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y 
Sbjct: 1384 AVLNMGEPVTVSSCDLLVVSAGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYC 1443

Query: 425  DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                     +    E S   +++K   K ++  +                 +  S+LV  
Sbjct: 1444 RHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDH 1485

Query: 485  VKKILQENKEE 495
            V + L+    +
Sbjct: 1486 VMQKLRTKVGD 1496


>gi|116871955|ref|YP_848736.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|123458156|sp|A0AG21|HISZ_LISW6 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|116740833|emb|CAK19953.1| histidyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 393

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 144/395 (36%), Gaps = 49/395 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E +   +I   + + +E  GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREAQAAYKIEQQVNHYFEKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+    T+    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVTLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ VG  +  A+ E  +     L A+  +  ++ I + +  I   ++  + L 
Sbjct: 116 NEQTQAGIELVGYPSIKAEIECILSGIGVLNAL--EIPNFQIELGHAAIYRRVIHLLNLP 173

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++                     +LL+          F      T +  D +++   
Sbjct: 174 ETAEI-------------------DFRLLIQNKSLTGIQQFVANNPSTLD--DFILALPR 212

Query: 246 IDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +    K++ +  + +          +E+  I E V      +  I +   +V+   YYTG
Sbjct: 213 LFGPAKAILKQAKNLTTDKGILTALSEMETIVEAVS----YTADISVDLGLVQDFHYYTG 268

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++         N             GGRYD L+ +F   + PA G ++ +  L      
Sbjct: 269 IIFRGYADLAADN----------FLSGGRYDHLLEQFTSFSSPAVGLALNLDSLTTLQNR 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                          I  + +D D+L + +   Q 
Sbjct: 319 AGIIKKQAPT-----ILLIHYDLDALPQAEKLMQE 348


>gi|226290575|gb|EEH46059.1| serine/threonine-protein kinase gcn2 [Paracoccidioides brasiliensis
            Pb18]
          Length = 1546

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 82/492 (16%), Positives = 156/492 (31%), Gaps = 58/492 (11%)

Query: 10   ELPRGFADC--------PTK--EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            + PR F D              E+ + + + + + +I+  +G   +ET     S    + 
Sbjct: 926  QRPRKFEDIAWDMDSRRTPPVSEVLLHSLVKEKLTSIFRKHGA--VET---TRSSLFPRS 980

Query: 60   LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
                +    GV  L D  G  + L YDLT P AR ++    +I        +     +  
Sbjct: 981  ----EHYPSGVVRLLDPAGNLVQLPYDLTLPNARSISRLDSSIEKTFTFGTVYRESIHGG 1036

Query: 120  HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                           N           M +M     E   ++       IN+  +LD I+
Sbjct: 1037 APRCHQEVDFDMISHNTLDLTLKEAEVMKVMDEILNEFPSLRSVPMCFHINHSDLLDAIM 1096

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                +    K   + I+ +    +  + +Q ++  L           +    + S  ID 
Sbjct: 1097 VFCRISPQQKPVVKEILSKL--NVGPYTMQKIRSELR----------SPAVGIASTSIDD 1144

Query: 240  MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK-ISSTIVRG 298
            +  F   D      +  + +   + G +  + L  I   +                 V  
Sbjct: 1145 LTRFDFRDSP---DKALKRLLAIMEGTEYADRLAPIFARLNAVVSYLKGFHVKRKIYVNP 1201

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-----NVPATGFSI 353
            L       +   + F  +++ ++  VF     GGRYD L+  F  +        A GF++
Sbjct: 1202 LSSLNDKFFRGSILFQCVSDTKRRDVF---AAGGRYDSLIQEFHPKVLYGTQRHAVGFNL 1258

Query: 354  GISRLIV------------ALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQML 400
            G  +L +             LK  E+  + I       +     D+    +      Q L
Sbjct: 1259 GWEKLCLSMSNHLKGSNKAFLKHAEAEISGIWRSRRCDVLVASFDATVLRTVGVGVIQEL 1318

Query: 401  RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
               GI AE+ + +S +    L      +    +I       RG L++K ++  +E     
Sbjct: 1319 WAHGISAELSVDTS-SLEEILSRYKNDSHSWVVIVKQDSMERG-LKVKHISTKEEFEVRS 1376

Query: 461  KNNESWREARVA 472
                 W    + 
Sbjct: 1377 SELAGWLRGEIG 1388


>gi|298484911|ref|ZP_07003010.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298160598|gb|EFI01620.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 395

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 148/400 (37%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               A+L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVVAL--------------TADLPQELASMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      N+L+ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALNDLLAIAERLAAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGQ 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G         DS   + +Q   Q LR+ G R 
Sbjct: 327 AEIVLPSGG-----IWVPDSTDAALWQQVCQ-LRSEGQRV 360


>gi|226939624|ref|YP_002794697.1| ATP phosphoribosyltransferase regulatory subunit [Laribacter
           hongkongensis HLHK9]
 gi|254801986|sp|C1DD53|HISZ_LARHH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|226714550|gb|ACO73688.1| HisZ [Laribacter hongkongensis HLHK9]
          Length = 385

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 81/402 (20%), Positives = 138/402 (34%), Gaps = 53/402 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD      R       ++   +  YG++ +  PL+EY+DSL      +   +   
Sbjct: 6   LPEHIADILPATARQLESAKAAMLERFRRYGYELVSPPLIEYTDSLLTNA--DPALDMQT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A          R    G V      G  R R+ +
Sbjct: 64  FKLDDQLSGRQLGLRADMTPQVARIDAHLLAHRQGVTRLCYAGSVVHTRASGLMRSREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     AD E+  +M  TL  VG   +   + + +  +   ++ +  L G+ +
Sbjct: 124 QVGAELYGCYDLAADIEIIELMLSTLAGVG--IDAVTLDLGHLGVYRALVREAQLDGETE 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                        L       V+ L  + R      F                 + +   
Sbjct: 182 QALFA-------ALQAKDRASVEALTADVREPFCSAFRH--------------LVDLYGP 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +++ +    + G        ++L      + +   +  RI    T +RG  Y+TG ++ A
Sbjct: 221 EAIGKARARLPGLPGIRAALDDLE----RLAQIFASRARISFDLTELRGTHYHTGLMFAA 276

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYD +  RF  +  PATGFS+ +  +I  L       
Sbjct: 277 YAE----------GWAEELARGGRYDNVGRRFG-RARPATGFSLDLRDMIRVL------- 318

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
                   + +   D     LS+       LR AG    +  
Sbjct: 319 PQTHPSKGIRVRAAD-----LSRLADEVARLRAAGEVVVVDY 355


>gi|171463412|ref|YP_001797525.1| tRNA synthetase class II (G H P and S) [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|229464978|sp|B1XU84|HISZ_POLNS RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|171192950|gb|ACB43911.1| tRNA synthetase class II (G H P and S) [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 387

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 75/389 (19%), Positives = 143/389 (36%), Gaps = 49/389 (12%)

Query: 17  DCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD 76
           D    E      +  ++ ++Y++YG++ +  P+LE+ DSL      +       F L D 
Sbjct: 12  DVMPAEACKVESLRRAVLDLYQSYGYELVAPPILEFLDSLLTGTGSDLNL--QTFKLVDQ 69

Query: 77  -DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
             G+ + LR D+T  +AR  A +        R    G V           R+ +Q   + 
Sbjct: 70  LSGRTLGLRADMTPQVARIDA-HLLNRADVTRLCYAGSVAHARTPVGSSAREELQLGAEI 128

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
            G +   AD E   ++  TL   G+     ++ +++  IL GIL+               
Sbjct: 129 YGCATWEADLEAITLLLKTLSVAGL--EKVYLDLSHAGILAGILDG-------------- 172

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                  LDK  ++ +  LL        G+++        +  + +  L+    + + + 
Sbjct: 173 -----QSLDKETIEALYGLLQSKDRPRLGEWSTCLPENVAKALVALIELNGPCAEVLAKA 227

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
            + +    A +K   +L         +   +  + I    +RG +Y++G ++ A +    
Sbjct: 228 KKELPKHAAIDKALADLE-RLVSAAANLSANVELSIDLADLRGYQYHSGVMFAAYVDRLP 286

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
                       +  GGRYD +   F  +  PATGFS+     ++ L +L         +
Sbjct: 287 Q----------PIARGGRYDHVGQAFG-RPRPATGFSL----DLLTLANLSPLNVRKMAI 331

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
               +     +   LSK       LR  G
Sbjct: 332 TAPWV-----EDAELSKAIA---ALRDKG 352


>gi|194289998|ref|YP_002005905.1| ATP phosphoribosyltransferase regulatory subunit [Cupriavidus
           taiwanensis LMG 19424]
 gi|229464973|sp|B3R1J2|HISZ_CUPTR RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|193223833|emb|CAQ69840.1| hetero-octameric ATP phosphoribosyl transferase, tRNA
           synthetase-like subunit [Cupriavidus taiwanensis LMG
           19424]
          Length = 383

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 128/353 (36%), Gaps = 44/353 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 7   LPENIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYLESLLTGTGHDLDLR--T 64

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 65  LKLVDQLSGRTMGLRADITPQVARIDA-HLLNRPGVTRLCYAGNVLHARPAGFHATREPI 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M   L A G+   D  I + +  IL+ +L  +       
Sbjct: 124 QIGAEIYGHAGLEADVEIQELMLAALTAAGLS--DIRIDLCHAGILEALLAGLPS----- 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                          +     +   L         + T  A +   + D +++  ++   
Sbjct: 177 --------------IRKIEDALFAALETKDVPALRELT--AGMPQTERDALLALPTLYGG 220

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +      +  + A  +  +EL  +             + I  + +RG  Y++G ++ 
Sbjct: 221 VEVIERARATLPASPAIGRALDELAAL-----AVQVRGASVNIDLSDLRGYHYHSGVMFA 275

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           A +            +   V  GGRYD +   F  +  PATGFS+ +  +   
Sbjct: 276 AYVA----------GLPNYVARGGRYDKVGEAFG-RARPATGFSLDLREVAAL 317


>gi|304311749|ref|YP_003811347.1| ATP phosphoribosyltransferase regulatory subunit [gamma
           proteobacterium HdN1]
 gi|301797482|emb|CBL45702.1| ATP phosphoribosyltransferase regulatory subunit [gamma
           proteobacterium HdN1]
          Length = 407

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 79/398 (19%), Positives = 141/398 (35%), Gaps = 44/398 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E     ++   + +++ ++G+  +   L+EY DSL     + D   K  
Sbjct: 9   LPDGIEELLPPEAARLEQLRRKLLDLFRSWGYQQVFPSLVEYLDSLLAGAGN-DLAQK-T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T  +AR  A +        R    G V   +       R  I
Sbjct: 67  FHLTDAYTGKQMGIRADMTPQIARMDA-HSLPNTGATRLCYAGHVLHAKPSTLAAPRALI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G S   +D E+ ++M +TL     + ++  + + +  I   + E+ GL  D +
Sbjct: 126 QIGAELYGHSGIGSDTEIILLMLETLSQ--AELSEIFLDLGHVAIYRALAEQAGLGADAQ 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                   R  +   +  +  ++  L E   + +            Q   ++  L+ D  
Sbjct: 184 W-------RLFEIFQRKAVPELEEFLTEHLQEEAMR----------QRFRVLPALAGDGS 226

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                   L     A     +EL  I+  VR+    +  +      +RG  Y+TG V+ A
Sbjct: 227 VLQKAREALAGAPAAVFAALDELSQIAAFVRQRA-PAVTLYFDLGELRGYHYHTGPVFSA 285

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                       P V  +V  GGRYD +   +  +  PATGFS         +       
Sbjct: 286 Y----------MPGVGHAVASGGRYDKIGEVYG-RARPATGFS---------MDLARLVK 325

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            +  +            +   +      Q LR  G   
Sbjct: 326 WSPLQATIPRRIVAPEMAIENAALWAQIQQLRREGNIV 363


>gi|91784196|ref|YP_559402.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           xenovorans LB400]
 gi|123062757|sp|Q13X39|HISZ_BURXL RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|91688150|gb|ABE31350.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           xenovorans LB400]
          Length = 383

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 75/398 (18%), Positives = 134/398 (33%), Gaps = 60/398 (15%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRHLLDRFRSYGYEMVMPPLLEYIESLLTGGGHDLNLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGNVAHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+      + + +  +L  ++E      +  
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALRLAGL--AKVRLDLCHAGVLAALIEAEPAAAE-- 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +     D L    +  +  L               ANLT    D + +   +  +
Sbjct: 179 -----LGQSLYDALAGKDVPRLVEL--------------TANLTPVIRDALRALPRLYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S + E    +    A  +  ++L  ++  V         + I    +RG  Y++G ++ 
Sbjct: 220 ASVLDEARARLPNMPAIARALDDLAFLASQVD-----GAEVMIDLADLRGYAYHSGVMFS 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA-TGFSIGISRLIVALKSLES 367
           A +            V  +V  GGRYD +   +            +     I  +++  S
Sbjct: 275 AYV----------DGVPNAVARGGRYDHVGQAYGRARAATGFSLDLREVARISPVEARSS 324

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMY-TQMLRTAG 404
           +     +                 +        LR AG
Sbjct: 325 AILAPWQHD---------------EALRVSVAALRDAG 347


>gi|297296137|ref|XP_002804763.1| PREDICTED: eukaryotic translation initiation factor 2-alpha kinase
           4-like [Macaca mulatta]
          Length = 714

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 95/489 (19%), Positives = 175/489 (35%), Gaps = 69/489 (14%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
            +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 126 AKMQQYVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 172

Query: 77  DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
            G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 173 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 229

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
            S+  +      ++                           L  IL   G+  D      
Sbjct: 230 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 289

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
           +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 290 IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 335

Query: 252 MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           M  +  L+K   +  +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 336 MPTINSLIKQKTSIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 390

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
             I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 391 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 450

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +      +G   +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 451 LNMEEPVTIGSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 510

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                  +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 511 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 552

Query: 487 KILQENKEE 495
           + L+    +
Sbjct: 553 QKLRTKVSD 561


>gi|296114954|ref|ZP_06833600.1| putative histidyl-tRNA synthetase [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978512|gb|EFG85244.1| putative histidyl-tRNA synthetase [Gluconacetobacter hansenii ATCC
           23769]
          Length = 387

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 4/173 (2%)

Query: 1   MGKKTKLRAEL-PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M     L   L P GF D            L+++  ++  +G+D +  PLLE+ ++L   
Sbjct: 1   MTDDPPLNPALLPSGFVDVLPPAAEAEAIGLEALMRVFSTHGYDRVSPPLLEFEETLL-- 58

Query: 60  LPDEDRPNKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
                   +  F L D D  + ++LR D+T  +AR  A        P R    G      
Sbjct: 59  TGSGAAVAEQTFRLMDPDTRRMMALRPDMTPQIARIAATRLAHEERPLRLSYAGACVMMG 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
                  RQ +Q  ++ +G     ADAE+  + A+ L+ +G+    + + +  
Sbjct: 119 SPARETDRQILQAGIELIGPDTPVADAEIVALGAEALQVLGVPHVSFDLTMPP 171


>gi|22297725|ref|NP_680972.1| ATP phosphoribosyltransferase regulatory subunit
           [Thermosynechococcus elongatus BP-1]
 gi|46395856|sp|Q8DMD8|HISZ_THEEB RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|22293902|dbj|BAC07734.1| ATP phosphoribosyltransferase regulatory subunit
           [Thermosynechococcus elongatus BP-1]
          Length = 408

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 74/432 (17%), Positives = 148/432 (34%), Gaps = 51/432 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D    ++  +  +   +  +++++G+  I TP +E   +L          
Sbjct: 1   MVYQPACGARDILPLDVARQRWLEQRLERVFQSWGYQEIITPTIETLATLTAGG---TVH 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK-HGPGRF 125
            + V  +Q    + + LR +LTA +AR        +  P R Y    VFR       G  
Sbjct: 58  PETVIQVQGSGDEPLGLRPELTASIARAAVTRMAGMQLPQRLYYKTNVFRRTTGAELGNQ 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           ++F Q  V+ +G++   ADAE+  ++ + L  + +   + ++ + +  +   +L      
Sbjct: 118 QEFFQAGVELLGATGLAADAEILWLVQECLGVLAV--GEAYLLVGDAHLTQQLLGTFPAE 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               + + L  L  +              L     D +           E  + +  +  
Sbjct: 176 LQKTVRQCLANLDRVSLQA----------LPAPWRDRALALFDLRGTPEEVGERLAQW-- 223

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                             +   G  +     + +      S  I +  ++V+  +YYTG 
Sbjct: 224 ------------------SDVAGVVDRFAQLQQLLALVAESLAITLDLSLVQSFDYYTGI 265

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           ++E ++                V  GGRYD L+S +        G        + AL   
Sbjct: 266 IFEVLIPTET--------ELRLVAQGGRYDQLLSIYHPDGATVPGIGFVF--NVEALLQA 315

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGSSKNFGNQLK-Y 423
            +               +   +++L+    + Q LR  G  R E+ L        Q++ Y
Sbjct: 316 VAIPPAALLAPRSQWLVVPRTANALAAALHHAQTLRLDGSTRVELALLELTP--EQIRAY 373

Query: 424 ADRRNCPL-AII 434
           A  R  P  A I
Sbjct: 374 ARDRQIPYIAWI 385


>gi|302189785|ref|ZP_07266458.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. syringae 642]
          Length = 395

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 77/400 (19%), Positives = 147/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               A+L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVIAL--------------TADLPQELAAMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      ++L+ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLSIAERL-AVRFPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGQ 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G   I   D    +L +       LR+ G R 
Sbjct: 327 AEIVLPSGG---IWVPDSTDAALWQR---VCQLRSEGQRV 360


>gi|325982757|ref|YP_004295159.1| histidyl-tRNA synthetase 2 [Nitrosomonas sp. AL212]
 gi|325532276|gb|ADZ26997.1| histidyl-tRNA synthetase 2 [Nitrosomonas sp. AL212]
          Length = 383

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 76/406 (18%), Positives = 139/406 (34%), Gaps = 51/406 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D    E          I ++   +G+  +  PLLEY +SL      +       
Sbjct: 6   LPEYVEDILPAEALHIEVTRRQILDLLLTHGYQQVIPPLLEYVESLLSGSGSDMNL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + LR D+T  +AR  A +        R   +  V      G  + R+ +
Sbjct: 64  FKVIDQLSGRMMGLRADMTPQVARIDA-HLLNFNGITRLCYVNSVLHTIPSGITQTREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G S   +D E+  +M + L       N+ H+ + +  +  G+++  G+  + +
Sbjct: 123 QIGAELYGHSGLESDLEVQRLMLECLSV--SHINEIHLDLGHVAVFRGLIKGAGISRELE 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +  +L         +          +  +++  L  D +
Sbjct: 181 A-------------------ELFSVLQAKDISTLQELCLKLKKGIREALLLLPELYGD-K 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K + +    +          NEL ++ + ++        +      +RG  Y+TG V+ A
Sbjct: 221 KILADAMARLPDYPVIRTALNELGMVEKELK---PVVGSVAFDLADLRGYHYHTGMVFAA 277

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            ++  GGRYD +   F  +  PATGFS+ +  L   +K      
Sbjct: 278 YA----------RGCSSAIALGGRYDEIGKTFG-RARPATGFSMDLRELSRLVK------ 320

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
              K+    +    +     L       Q LR AG    M L   K
Sbjct: 321 --PKKYPKGIRAPFEKKDKRLED---MIQQLRKAGHIVVMELPEQK 361


>gi|114656306|ref|XP_001140160.1| PREDICTED: eukaryotic translation initiation factor 2 alpha kinase 4
            isoform 3 [Pan troglodytes]
          Length = 1621

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 94/489 (19%), Positives = 173/489 (35%), Gaps = 69/489 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1033 AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1079

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1080 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1136

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  +      ++                           L  IL   G+  D      
Sbjct: 1137 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 1196

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
            +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 1197 IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1242

Query: 252  MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 1243 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 1297

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 1298 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 1357

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 1358 LNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 1417

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                   +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 1418 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 1459

Query: 487  KILQENKEE 495
            + L+    +
Sbjct: 1460 QKLRTKVTD 1468


>gi|260890442|ref|ZP_05901705.1| histidine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860062|gb|EEX74562.1| histidine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 230

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 97/258 (37%), Gaps = 28/258 (10%)

Query: 211 VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN 270
           ++  L +   D+   +        +  D       ++  K    L E  K      K + 
Sbjct: 1   MEKRLDKLSDDSKRRYKTNPLRALDSKDKGDQEQFVNAPKLYDYLDEESKNYFEDTKKYL 60

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL             +    ++  +VRGL+YY+  V+E         +  K     +V  
Sbjct: 61  EL------------MNINYVVNDKLVRGLDYYSDTVFEI--------KSDKLGSQATVLA 100

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           GGRYD L+       VP  GF+ G+ R+ + +     +    K    + +   D   +  
Sbjct: 101 GGRYDRLLEILGNAKVPGIGFAAGMERIAMLMDENLIAKKENK----IYVIYFDETKEYF 156

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + LR   I+      + K+FG Q+K A+R N    +I G  E+   ++ +K  
Sbjct: 157 ---VKVIEELRKNEIKVNFDY-NPKSFGAQMKKANRENADYVLILGEDEQKENVVTMKKF 212

Query: 451 AKGKELSREIKNNESWRE 468
           + G++   ++++     +
Sbjct: 213 STGEQEKYKLEDVIEILK 230


>gi|229089109|ref|ZP_04220414.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock3-44]
 gi|228694213|gb|EEL47884.1| Histidyl-tRNA synthetase 1 [Bacillus cereus Rock3-44]
          Length = 296

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 75/318 (23%), Positives = 139/318 (43%), Gaps = 38/318 (11%)

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
           MA   +       D  I  NNRK+L GIL+ I +  +    +   V+ ++DKL+K G+ G
Sbjct: 7   MAMAFDLFKTLNLDVIIQYNNRKLLAGILKSIEIPDE----QTNDVILSLDKLEKIGVDG 62

Query: 211 VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN 270
           V+  L            +   + ++ I+++ + +   +   + E  +    ++  + G +
Sbjct: 63  VRKDL------------QSRGIANDTIEVICNTVESCMTLKLDEFKQTFSNSLVTD-GID 109

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL  + + +   G  +N I  +  + RGL  YTG VYE  L    +           +G 
Sbjct: 110 ELQQLQQYLLALGIQNNTI-FNPFLARGLTMYTGTVYEIFLADGSITSS--------IGS 160

Query: 331 GGRYDGLVSRFKGQN--VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
           GGRYD ++  F+G N   P  G S G+  +  AL+  E       +     I  +   ++
Sbjct: 161 GGRYDNIIGAFRGDNIAYPTVGISFGLDVIYTALERKE------TKSTSADIFIIPIGTE 214

Query: 389 SLSKYQMYTQMLRTAG-IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +  K       LR+   +R E+ L + +     L YA++ N P  +I G  E S   + +
Sbjct: 215 T--KCLQIATQLRSNSTMRIELEL-AGRKLKRALNYANKENIPYVLIIGETEISTETVVL 271

Query: 448 KDLAKGKELSREIKNNES 465
           +++ +G E+   + + E 
Sbjct: 272 RNMKEGTEMKLPLSSIED 289


>gi|209521843|ref|ZP_03270520.1| tRNA synthetase class II (G H P and S) [Burkholderia sp. H160]
 gi|209497726|gb|EDZ97904.1| tRNA synthetase class II (G H P and S) [Burkholderia sp. H160]
          Length = 383

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 119/333 (35%), Gaps = 43/333 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRHLLDRFRSYGYEMVMPPLLEYLESLLTSGGHDLNLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQMSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGNVAHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+      + + +  +L  ++E      +  
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALRLAGL--AKVRLDLCHAGVLAALIEAEPAAEE-- 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +     D L                 D        A  +    D + +  ++  +
Sbjct: 179 -----LGQALYDALAG--------------KDVPRLVEMTAQFSPVIRDALRALPTLYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S + E    +  + A  +  ++L  ++  V         + I    +RG  Y++G ++ 
Sbjct: 220 ASVLEEARARLPNSPAIARALDDLAFLASQVD-----GAEVMIDLADLRGYAYHSGVMFS 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
           A +            V  +V  GGRYD +   +
Sbjct: 275 AYV----------DGVPNAVARGGRYDHVGQAY 297


>gi|114656304|ref|XP_001140245.1| PREDICTED: eukaryotic translation initiation factor 2-alpha kinase 4
            isoform 4 [Pan troglodytes]
          Length = 1649

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 94/489 (19%), Positives = 173/489 (35%), Gaps = 69/489 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1061 AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1107

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1108 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1164

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  +      ++                           L  IL   G+  D      
Sbjct: 1165 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 1224

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
            +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 1225 IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1270

Query: 252  MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 1271 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 1325

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 1326 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 1385

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 1386 LNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 1445

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                   +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 1446 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 1487

Query: 487  KILQENKEE 495
            + L+    +
Sbjct: 1488 QKLRTKVTD 1496


>gi|7018545|emb|CAB75678.1| hypothetical protein [Homo sapiens]
          Length = 938

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 94/489 (19%), Positives = 173/489 (35%), Gaps = 69/489 (14%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
            +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 350 AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 396

Query: 77  DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
            G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 397 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 453

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
            S+  +      ++                           L  IL   G+  D      
Sbjct: 454 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 513

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
           +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 514 IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 559

Query: 252 MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 560 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 614

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
             I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 615 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 674

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 675 LNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 734

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                  +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 735 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 776

Query: 487 KILQENKEE 495
           + L+    +
Sbjct: 777 QKLRTKVTD 785


>gi|119612794|gb|EAW92388.1| eukaryotic translation initiation factor 2 alpha kinase 4 [Homo
            sapiens]
          Length = 1649

 Score =  104 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 94/489 (19%), Positives = 173/489 (35%), Gaps = 69/489 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1061 AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1107

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1108 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1164

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  +      ++                           L  IL   G+  D      
Sbjct: 1165 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 1224

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
            +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 1225 IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1270

Query: 252  MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 1271 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 1325

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 1326 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 1385

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 1386 LNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 1445

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                   +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 1446 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 1487

Query: 487  KILQENKEE 495
            + L+    +
Sbjct: 1488 QKLRTKVTD 1496


>gi|296214217|ref|XP_002753555.1| PREDICTED: eukaryotic translation initiation factor 2-alpha kinase 4
            [Callithrix jacchus]
          Length = 1641

 Score =  104 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 90/459 (19%), Positives = 165/459 (35%), Gaps = 53/459 (11%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1061 AKMQQHVCETIIRIFKRHGAVQLGTPLL-----LPR--------NRQIYEHNEAALFMDH 1107

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1108 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1164

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  +      ++                           L  IL   G+  D      
Sbjct: 1165 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYNIYLNHTMLLKAILLHCGIPEDKLSQVY 1224

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
            +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 1225 IILYDAM--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1270

Query: 252  MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 1271 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 1325

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F    ++++  V   +  GGRYD L+  F+G         +IG+S  I  + +  
Sbjct: 1326 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPHFRGPQALGPVPTAIGVSIAIDKISAAV 1385

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 1386 LNMEEHVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 1445

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
                   +    E S   +++K   K ++  +  +  +S
Sbjct: 1446 HEITYVALVSDKEGS--HVKVKSFEKERQTEKRHQEPKS 1482


>gi|114656310|ref|XP_001139259.1| PREDICTED: eukaryotic translation initiation factor 2 alpha kinase 4
            isoform 1 [Pan troglodytes]
          Length = 1611

 Score =  104 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 94/489 (19%), Positives = 173/489 (35%), Gaps = 69/489 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1061 AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1107

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1108 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1164

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  +      ++                           L  IL   G+  D      
Sbjct: 1165 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 1224

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
            +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 1225 IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1270

Query: 252  MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 1271 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 1325

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 1326 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 1385

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 1386 LNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 1445

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                   +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 1446 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 1487

Query: 487  KILQENKEE 495
            + L+    +
Sbjct: 1488 QKLRTKVTD 1496


>gi|110835059|ref|YP_693918.1| ATP phosphoribosyl transferase regulatory subunit [Alcanivorax
           borkumensis SK2]
 gi|110648170|emb|CAL17646.1| ATP phosphoribosyl transferase regulatory subunit, putative
           [Alcanivorax borkumensis SK2]
          Length = 391

 Score =  104 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 79/402 (19%), Positives = 147/402 (36%), Gaps = 49/402 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +      R   ++     ++Y+ +G++ +  PL+E+ +SL      +    +  
Sbjct: 10  LPDGVEEVLPGRARAIEQLRRQTLDLYQRWGYELVFPPLIEFMESLLNGGGRD--LERET 67

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +      P R        R      G  R   
Sbjct: 68  FKITDQLTGRLMGVRADITPQVARMDA-HSLRRNAPSRLCYCSSALRTRPVVAGGTRLPY 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+  G +   +D E+  ++ +TL   G+++    + + +  +  G+LE   L   ++
Sbjct: 127 QLGVELFGHAGSDSDLEVISLLLETLALSGVEQ-QVVLDLGHVGLFRGLLEGCDLSETEQ 185

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                I +R             ++ L      +         L +               
Sbjct: 186 NQLEDIYVR-----------KARVELDSFIASHDLPAPAAKALAALP-------WLAGGV 227

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + ++E   L+          +EL V+++++   G    R+ +    +RG  Y+TGCV+ A
Sbjct: 228 EVLNEARALLSHFSGALAALDELAVLADVLGARG---VRLHLDLGELRGYHYHTGCVFAA 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            L          P     V  GGRYD +   F  +  PATGFS  +  L    +S   + 
Sbjct: 285 YL----------PGESEPVAKGGRYDHIGEVFG-RARPATGFSADLKMLAERAQSAALTG 333

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
                        +   S   + +      LR  G R  + L
Sbjct: 334 ------------ILAEGSLQDAAFATRVAALREQGERVVLAL 363


>gi|146283976|ref|YP_001174129.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           stutzeri A1501]
 gi|166219840|sp|A4VQN6|HISZ_PSEU5 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|145572181|gb|ABP81287.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Pseudomonas stutzeri A1501]
          Length = 395

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 83/405 (20%), Positives = 145/405 (35%), Gaps = 49/405 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++ +G++ + TP +E+ +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIETARRRVLDLFQRWGYELVITPHVEFLESLLTGSGQDLDLR--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + LR D+T  +AR V  +      P R    G V   +       R  I
Sbjct: 67  FKVIDPLSGRQMGLRADITPQVAR-VDAHTLRREGPSRLCYAGSVLHAKPQALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M + LE       D H+ + +  I  G+ +   L G+ +
Sbjct: 126 QLGAELYGDASASSDLEVISLMLEMLEL--ADVPDVHMDLGHVGIYRGLAKAAALSGEAE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                   R  D L +  +  ++ L               A L      ++ +   +   
Sbjct: 184 Q-------RLFDALQRKAMDEIEQL--------------TAALDPALASMLRALARLCGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +++ +    +    AG +   E +          Y    +      +RG  Y+TG V+ 
Sbjct: 223 RETLDDARHALAAAPAGVQAALETLATVADQLALRYPQVPLYFDLGELRGYHYHTGMVFA 282

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P V  S+  GGRYD + + F  +  PATGFS         LK+L   
Sbjct: 283 AFV----------PGVGQSIAQGGRYDDIGADFG-RARPATGFSTD-------LKTLVGL 324

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
            N         I     D   L       + LR  G R    L  
Sbjct: 325 GNADLTTPVAGIWAPYGDESGLWGAI---RDLRRQGERVVQALDG 366


>gi|146305675|ref|YP_001186140.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           mendocina ymp]
 gi|166219838|sp|A4XPZ2|HISZ_PSEMY RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|145573876|gb|ABP83408.1| tRNA synthetase, class II (G, H, P and S) [Pseudomonas mendocina
           ymp]
          Length = 395

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 83/404 (20%), Positives = 143/404 (35%), Gaps = 46/404 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++ +G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEAARRQVLDLFQRWGYEFVVTPHIEYLESLLTGAGQDLDLR--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVTDPLSGRQMGFRADITPQVARIDA-HTLRREGPNRLCYAGSVLHAQPRALTTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++  +D E+  ++ +TLE       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPASDIEVISLLVETLEL--AAVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              Q +   L     D     T         +   ++ L    E
Sbjct: 184 -------------------QQLFDALQRKAMDEIEALTAALPAGLGNMLRSLAELCGGRE 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                   LV+   A     +ELV I++ +    Y    +      +RG  Y+TG V+ A
Sbjct: 225 VLDLAQAALVEAPDAVHAALDELVAIADALELR-YPELPLYFDLGELRGYNYHTGVVFAA 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA-LKSLESS 368
            +          P   G++  GGRYD   + F  +  PATGFS  +  L+      L+ +
Sbjct: 284 FV----------PGEGGAIAQGGRYDDTGAVFG-RARPATGFSTDLKTLVTLGDMRLDEA 332

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQML--------RTAG 404
              +       +          S+ +   Q L        R AG
Sbjct: 333 VRGVWAPDNHDLYLWQAVRRLRSEGERVVQALPGQSEADAREAG 376


>gi|65287717|ref|NP_001013725.2| eukaryotic translation initiation factor 2-alpha kinase 4 [Homo
            sapiens]
 gi|296439368|sp|Q9P2K8|E2AK4_HUMAN RecName: Full=Eukaryotic translation initiation factor 2-alpha kinase
            4; AltName: Full=GCN2-like protein
 gi|148921798|gb|AAI46320.1| Eukaryotic translation initiation factor 2 alpha kinase 4 [synthetic
            construct]
 gi|261857554|dbj|BAI45299.1| eukaryotic translation initiation factor 2 alpha kinase 4 [synthetic
            construct]
          Length = 1649

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 94/489 (19%), Positives = 173/489 (35%), Gaps = 69/489 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1061 AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1107

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1108 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1164

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  +      ++                           L  IL   G+  D      
Sbjct: 1165 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 1224

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
            +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 1225 IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1270

Query: 252  MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 1271 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 1325

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
              I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 1326 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 1385

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 1386 LNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 1445

Query: 427  RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                   +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 1446 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 1487

Query: 487  KILQENKEE 495
            + L+    +
Sbjct: 1488 QKLRTKVTD 1496


>gi|58039888|ref|YP_191852.1| histidyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81351848|sp|Q5FR00|HISZ_GLUOX RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|58002302|gb|AAW61196.1| Histidyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 379

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 3/150 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP GFAD    E     R + S+   +  +G+  +  PLLE+  SL     +   P    
Sbjct: 13  LPSGFADLLPGEAEAEARGIASVMEAFSRHGYQRVRPPLLEFETSLLGGSGESLAP--QT 70

Query: 71  FSLQDDDG-QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D +  + ++LR D+T  +AR  +        P R    G        G    RQ  
Sbjct: 71  FRLMDPNSHRMMALRPDMTTQIARIASIRLQDAPRPLRLSYSGSCIVVGTPGREADRQIS 130

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           Q  ++ +G  +  ADAE+  + A  L  +G
Sbjct: 131 QAGIELIGPDSAQADAEVIALGAKALAELG 160


>gi|33862970|ref|NP_894530.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus str. MIT 9313]
 gi|46395724|sp|Q7TV03|HISZ_PROMM RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|33634887|emb|CAE20873.1| tRNA synthetases, class-II (G, H, P and S) [Prochlorococcus marinus
           str. MIT 9313]
          Length = 392

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 63/409 (15%), Positives = 136/409 (33%), Gaps = 43/409 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++ +  ++   +  +Y  +G+D +  P +E  ++L          
Sbjct: 1   MALQPAAGARDLNPQQVELNQKLSQRLAEVYRLWGYDEVSPPRVERLETLKAGGA---IA 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +  L     + + LR ++TA +AR           P R +  G +F +     G   
Sbjct: 58  SQDIVRLV--ADEPLGLRPEMTASIARAACTRLKQRPRPLRLWAAGTIFESRTADEGSLC 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                         E  +AEM ++                       +L   +E + L  
Sbjct: 116 IEENLQSGVELFGVEPINAEMELL----------------------SLLFSAVETLELSK 153

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +    +     +D +       ++  +            +   L ++Q + ++  L  
Sbjct: 154 RHQPRLLVGHTALMDLIMLPFQNDLREKIRTALIHYDRLALESLQLPNDQFERLLHHL-- 211

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVR-KSGYNSNRIKISSTIVRGLEYYTGC 305
           +      ++ E + G    ++  N L  + E +   +      +++  T     E YTG 
Sbjct: 212 ECRGEPLDVLERLSGLFGTQQALNNLQRLFEQMSPLAADQGIDLQLDPTFQPHFELYTGL 271

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V++ +                 +  GGRYD LV+R   + + A G     +   +     
Sbjct: 272 VFQLVCQSDA--------APVVIARGGRYDNLVARCGAKGLQAAGVGFSFAIDDI----R 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGS 413
           E  T  IK    V  T + +   + L       +     G RA + L +
Sbjct: 320 ELLTKEIKASDAVETTLVAYGEQATLEHALKRQRHWHKQGQRAVVELEA 368


>gi|226942907|ref|YP_002797980.1| ATP phosphoribosyltransferase regulatory subunit [Azotobacter
           vinelandii DJ]
 gi|259709911|sp|C1DLQ7|HISZ_AZOVD RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|226717834|gb|ACO77005.1| ATP phosphoribosyl transferase regulatory subunit [Azotobacter
           vinelandii DJ]
          Length = 395

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 80/400 (20%), Positives = 147/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E      +   + ++++ +G+  + TP +E+ +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVVRRQMLDLFQRWGYAFVVTPHIEFLESLLTGAGQDLDLR--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             + D   G+ I  R D+T  +AR  A +      PCR    G V   +       R  I
Sbjct: 67  LKVTDPLSGRLIGFRADITPQVARIDA-HTLRREGPCRLCYAGSVLHAKPRALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++  +D E+  +M + LE V +   D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPASDVEVISLMLEVLEQVAV--PDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                   R  D L +  +  V++L               A L + Q  ++ +   +   
Sbjct: 184 Q-------RLFDALQRKAVDEVEVL--------------TAVLPTAQAAMLRALAELCGG 222

Query: 250 KSMHELYE--LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           + + +L +  LV          +EL+ I++ +    Y    +    + +RG  Y+TG V+
Sbjct: 223 REVLDLAQACLVDAPAEVHAALDELIAIADSL-GVRYPELPLYFDLSELRGYNYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AAFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGQ 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                       +  +              Q LR  G R 
Sbjct: 327 VAPAEP------VVGIWAPDSHDVYLWQMVQRLRRQGERV 360


>gi|104783868|ref|YP_610366.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           entomophila L48]
 gi|123255232|sp|Q1I453|HISZ_PSEE4 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|95112855|emb|CAK17583.1| putative histidyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 395

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 149/400 (37%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +   ++  
Sbjct: 9   LPDGIEEVLPPEAARIEIARRQVLDLFQSWGYELVVTPHIEYLESLLTGAGQD--LDQRT 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVVDPQSGRLMGFRADFTPQVARIDA-HTLRREGPSRLCYAGSVLHAQPRALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ T+D E+  +M  TL+       D H+ + +  I  G+     L GD +
Sbjct: 126 QLGAELYGDASPTSDVEVISLMLATLQL--TDVPDVHMDLGHVGIYRGLARAANLSGDVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L +  +  V+ L               A+L  +  +++ + + +   
Sbjct: 184 QQ-------LFDALQRKAVDEVQTL--------------TADLPKDLGNMLRALVELCGG 222

Query: 250 KSM--HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           + +       L +   +     ++L+ I++ +  S Y    +      +RG  Y+TG V+
Sbjct: 223 REVLAEARVRLGRAPASVLAALDDLLAIADRL-ASRYPDLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P    S+  GGRYD + + F  +  PATGFS  +  L+   ++   
Sbjct: 282 AVFV----------PGEGQSIAQGGRYDDIGADFG-RARPATGFSTDLKTLVTLGRAEVV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                  M             S +    +   LR  G R 
Sbjct: 331 LPAGGIWMP----------DSSDAALWQHVCQLRNEGQRV 360


>gi|270009882|gb|EFA06330.1| hypothetical protein TcasGA2_TC009201 [Tribolium castaneum]
          Length = 1534

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 77/486 (15%), Positives = 149/486 (30%), Gaps = 60/486 (12%)

Query: 24   RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL 83
            +I + + ++I  I++ +G   + TPLL        +    +   K +       G  +SL
Sbjct: 949  QIYDFVKETIVKIFKQHGAQNLTTPLLMPKS---HYYEGVESCVKLMTHF----GGIVSL 1001

Query: 84   RYDLTAPLARYVAENF--DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
             +DL  P ARYVA N       +                       F          +++
Sbjct: 1002 PHDLRVPFARYVAWNRITLLRRYSVERVYREKRVFGFLPRELYECAFDIVTPSPGNHTSD 1061

Query: 142  TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
                 +   + + L  V  K       +  R     +++ I LH   K     I+ +  D
Sbjct: 1062 AEVLYVIYEIINELPGVKNK------HVTIRLNHSLLMKAILLHCGVKNRHEEILQKFSD 1115

Query: 202  KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL------ 255
              D           G+    +  D+     L+   I  + +  S + E S          
Sbjct: 1116 VKD-----------GKVPKSDLQDYLIQFGLSDNAISTLTNIFSSEFEVSKAANHFQSIT 1164

Query: 256  -YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS---STIVRGLEYYTGCVYEAIL 311
              +  + +   ++   EL  I+      G     +        I +        V E   
Sbjct: 1165 RKKSSEASHLAKQALQELKSIAYNAEAFGVTFEMVVAPGAVYNIQQYSGMICQFVCELKK 1224

Query: 312  GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS---LESS 368
                 N++              Y  ++             ++G+S  +  L      E  
Sbjct: 1225 KHKHGNKEVLAAGGRYDAMITSYRKIMENANMLARDIKQSAVGVSLSLDKLAQAVMREQE 1284

Query: 369  TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                 E+  V + ++        K     + L +AGIR  M    + N     +      
Sbjct: 1285 DLPSLEVLDVAVCSVGTKPLLREKT-KILRNLWSAGIRCAMI--EATNIEEIQEQCGELK 1341

Query: 429  CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
             P  ++    E  +G ++++                SW   R  + T+   ELV T+++I
Sbjct: 1342 VPHVVMLKDSE--QGTVRVR----------------SWERDRFQEKTVKTPELVETMQRI 1383

Query: 489  LQENKE 494
            ++  KE
Sbjct: 1384 IKCWKE 1389


>gi|39645018|gb|AAH09350.2| EIF2AK4 protein [Homo sapiens]
          Length = 829

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 86/486 (17%), Positives = 169/486 (34%), Gaps = 63/486 (12%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
            +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 241 AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 287

Query: 77  DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
            G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 288 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 344

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
            S+  +      ++                           L  IL   G+  D      
Sbjct: 345 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 404

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +I+  A+                +             +L+S  +  +  F+    +  + 
Sbjct: 405 IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGD--LQ 448

Query: 254 ELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGCVYEAI 310
           +L   +   I  + G  +LV    + + +      ++ I   ++  L   Y        I
Sbjct: 449 DLMPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLCIKLQVLINLGLVYKVQQHNGII 508

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLESST 369
             F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +   + 
Sbjct: 509 FQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAVLNM 568

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                +    +  +     S+S+    TQ L TAGI AE+    S++     +Y      
Sbjct: 569 EESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRHHEI 628

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
               +    E S   +++K   K ++  +                 +  +ELV  V + L
Sbjct: 629 TYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVLQKL 670

Query: 490 QENKEE 495
           +    +
Sbjct: 671 RTKVTD 676


>gi|327482303|gb|AEA85613.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           stutzeri DSM 4166]
          Length = 395

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 82/405 (20%), Positives = 144/405 (35%), Gaps = 49/405 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++ +G++ + TP +E+ +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIETARRRVLDLFQRWGYELVITPHVEFLESLLTGSGQDLDLR--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + LR D+T  +AR V  +      P R    G V   +       R  I
Sbjct: 67  FKVIDPLSGRQMGLRADITPQVAR-VDAHTLRREGPSRLCYAGSVLHAKPQALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M + LE       D H+ + +  I  G+ +   L G+ +
Sbjct: 126 QLGAELYGDASASSDLEVISLMLEMLEL--ADVPDVHMDLGHVGIYRGLAKAAALSGEAE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                   R  D L +  +  ++ L               A L      ++ +   +   
Sbjct: 184 Q-------RLFDALQRKAMDEIEQL--------------TAALDPALASMLRALARLCGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +++ +    +    A  +   E +          Y    +      +RG  Y+TG V+ 
Sbjct: 223 RETLDDARHALAAAPADVQAALETLATVADQLALRYPQVPLYFDLGELRGYHYHTGMVFA 282

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P V  S+  GGRYD + + F  +  PATGFS         LK+L   
Sbjct: 283 AFV----------PGVGQSIAQGGRYDDIGADFG-RARPATGFSTD-------LKTLVGL 324

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
            N         I     D   L       + LR  G R    L  
Sbjct: 325 GNADLTAPVAGIWAPYGDESGLWGAI---RDLRRQGERVVQALDG 366


>gi|194206809|ref|XP_001501317.2| PREDICTED: similar to Eukaryotic translation initiation factor
            2-alpha kinase 4 (GCN2-like protein) [Equus caballus]
          Length = 1651

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 86/486 (17%), Positives = 171/486 (35%), Gaps = 63/486 (12%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +I+ ++ ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1063 AKIQQQVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1109

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1110 SGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1166

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
             S+  ++     ++                           L  +L   G+  D      
Sbjct: 1167 TSTTNSSLPTAEIIYTIYEIIQEFPALQKRNYSIYLNHTMLLKAVLLYCGIPEDKLSQVY 1226

Query: 194  LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            +I+  A+                +             +L+S  +  +  F+    +  + 
Sbjct: 1227 VILYDAV--------------TEKLTRREVEAKFCNLSLSSTSLCRLYRFIEQKGD--LQ 1270

Query: 254  ELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE--YYTGCVYEAI 310
            +L   +   I  + G  +LV    + + +      ++ I   ++  L   Y        I
Sbjct: 1271 DLTPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLGIKLQVLINLGLVYKVQQHNGII 1330

Query: 311  LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLESST 369
              F    ++++      +  GGRYD L+ +F+G         +IG+S  I  + +  S+ 
Sbjct: 1331 FQFVAFIKRKQRATTEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAVSNM 1390

Query: 370  NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                 +    +  +     S+S+    TQ L TAGI AE+    S++     +Y      
Sbjct: 1391 EEPVTVSSCDLLVVSIGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRHHEI 1450

Query: 430  PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
                +    E S   +++K   K ++  +                 +  S+LV  V + L
Sbjct: 1451 TYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLESDLVDHVLQKL 1492

Query: 490  QENKEE 495
            +    +
Sbjct: 1493 RTKVSD 1498


>gi|225678368|gb|EEH16652.1| serine/threonine-protein kinase gcn2 [Paracoccidioides brasiliensis
            Pb03]
          Length = 1443

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 82/492 (16%), Positives = 156/492 (31%), Gaps = 58/492 (11%)

Query: 10   ELPRGFADC--------PTK--EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            + PR F D              E+ + + + + + +I+  +G   +ET     S    + 
Sbjct: 823  QRPRKFEDIAWDMDSRRTPPVSEVLLHSLVKEKLTSIFRKHGA--VET---TRSSLFPRS 877

Query: 60   LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
                +    GV  L D  G  + L YDLT P AR ++    +I        +     +  
Sbjct: 878  ----EHYPSGVVRLLDPAGNLVQLPYDLTLPNARSISRLDSSIEKTFTFGTVYRESIHGG 933

Query: 120  HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                           N           M +M     E   ++       IN+  +LD I+
Sbjct: 934  APRCHQEVDFDMISHNTLDLTLKEAEVMKVMDEILNEFPSLRSVPMCFHINHSDLLDAIM 993

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                +    K   + I+ +    +  + +Q ++  L           +    + S  ID 
Sbjct: 994  VFCRISPQQKPVVKEILSKL--NVGPYTMQKIRSELR----------SPAVGIASTSIDD 1041

Query: 240  MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK-ISSTIVRG 298
            +  F   D      +  + +   + G +  + L  I   +                 V  
Sbjct: 1042 LTRFDFRDSP---DKALKRLLAIMEGTEYADRLAPIFARLNAVVSYLKGFHVKRKIYVNP 1098

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-----NVPATGFSI 353
            L       +   + F  +++ ++  VF     GGRYD L+  F  +        A GF++
Sbjct: 1099 LSSLNDKFFRGSILFQCVSDTKRRDVF---AAGGRYDSLIQEFHPKVLYGTQRHAVGFNL 1155

Query: 354  GISRLIV------------ALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQML 400
            G  +L +             LK  E+  + I       +     D+    +      Q L
Sbjct: 1156 GWEKLCLSMSNHLKGSNKAFLKHAEAEISGIWRSRRCDVLVASFDATVLRTVGVGVIQEL 1215

Query: 401  RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
               GI AE+ + +S +    L      +    +I       RG L++K ++  +E     
Sbjct: 1216 WAHGISAELSVDTS-SLEEILSRYKNDSHSWVVIVKQDSMERG-LKVKHISTKEEFEVRS 1273

Query: 461  KNNESWREARVA 472
                 W    + 
Sbjct: 1274 SELAGWLRGEIG 1285


>gi|10440018|dbj|BAB15625.1| unnamed protein product [Homo sapiens]
          Length = 806

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 94/489 (19%), Positives = 173/489 (35%), Gaps = 69/489 (14%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
            +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 218 AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 264

Query: 77  DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
            G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 265 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 321

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDKLNER 193
            S+  +      ++                           L  IL   G+  D      
Sbjct: 322 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVY 381

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKS 251
           +I+  A+                +             +L+S  +  +  F+    DL+  
Sbjct: 382 IILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 427

Query: 252 MHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y      
Sbjct: 428 MPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKVQQHN 482

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE 366
             I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  + +  
Sbjct: 483 GIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAV 542

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +      +    +  +     S+S+    TQ L TAGI AE+    S++     +Y   
Sbjct: 543 LNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRH 602

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                  +    E S   +++K   K ++  +                 +  +ELV  V 
Sbjct: 603 HEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELVDHVL 644

Query: 487 KILQENKEE 495
           + L+    +
Sbjct: 645 QKLRTKVTD 653


>gi|255723485|ref|XP_002546676.1| histidyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240130807|gb|EER30370.1| histidyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 153

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 3/153 (1%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD---SLSKYQM 395
               G+++P  G S G+ RL   +K+  +  N       V +            L +   
Sbjct: 1   MFSNGKSIPCVGVSFGVERLFSIIKNRANLENISANHTDVYVMAFGGGEGWNGFLKERME 60

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
            T  L  AGI AE    +  N   Q   A++    LA+I G  E  +G ++IK L +G+E
Sbjct: 61  ITNKLWKAGINAEYLYKNKANIRKQFDAAEKAGAKLAVILGKEEYPQGQIRIKVLGQGEE 120

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKKI 488
              E+   E    A  +++ + + ++   +K I
Sbjct: 121 NEGELVETEELVAAVQSKLDVEVDDIARIIKGI 153


>gi|66818509|ref|XP_642914.1| hypothetical protein DDB_G0276829 [Dictyostelium discoideum AX4]
 gi|74857040|sp|Q550L8|IFKB_DICDI RecName: Full=Probable serine/threonine-protein kinase ifkB; AltName:
            Full=Initiation factor kinase B
 gi|60470946|gb|EAL68916.1| hypothetical protein DDB_G0276829 [Dictyostelium discoideum AX4]
          Length = 1358

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 76/493 (15%), Positives = 155/493 (31%), Gaps = 56/493 (11%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK-GVFSLQDD 76
                 +  R +    +  I+ N+G   I+TP L       K   +   P    V    D+
Sbjct: 634  LTPMHLICREKTFSRLEKIFLNHGSIRIDTPTL-----FPKNPTNSTHPGAANVAKFLDE 688

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-PGRFRQFIQCDVDN 135
             G  + L YDLT P AR+V  +               V+R  + G   +       D+  
Sbjct: 689  SGTVVYLPYDLTIPWARHVVIHNIQQAKRYTF---SKVYRRSQPGFSPKELYECDFDIIG 745

Query: 136  VGSSAETADAEMCMMMADTLEAVGIK-RNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
               S   +DAE   ++ + +E    +   +     +       I  KI ++    L+  L
Sbjct: 746  PSKSRHISDAETLRIIIEIMEEFKDELFGNNSGSNSGSGSGGSINYKIRINHYGLLDSIL 805

Query: 195  IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--KSM 252
                   +      Q V  L             K   L++  +  + ++     E  + +
Sbjct: 806  SECGVEKRFFTVVYQTVAQLHWRLNWAQVAQSLKEHGLSASIVSNISTYFRQRGELAQCV 865

Query: 253  HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             +L  L+        G ++L ++   ++       R  +  +++   +YY G V++A + 
Sbjct: 866  TQLESLLANHKEATTGISDLKILVRNLQMINIIP-RFLLDLSLIHNHQYYEGLVFQAYIE 924

Query: 313  FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV------PATGFSIGISRLIVALKSLE 366
             P ++    P     +  GGRYD L+                 G ++   +++ ++ +  
Sbjct: 925  RPTLSN---PSRTEIIMSGGRYDKLIKSLHPNPSLSNNIVSGVGVTLACEKIVNSVLNYR 981

Query: 367  SSTNNIKEMG---------------------------------PVLITTMDHDSDSLSKY 393
                N                                       + +      S  L + 
Sbjct: 982  QHLLNNCFNTTYTRRNKDPPNSNNNPNNNNLNNNVSIFTKFQSHIEVFVCSLGSSLLGEK 1041

Query: 394  QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                  L +AGI+A+       +  +          P  +I        G L++K +   
Sbjct: 1042 LQVASQLWSAGIKADYSQTDYYSSEDIYSNCRENGIPWVVILREKAFQIGKLKVKQIETR 1101

Query: 454  KELSREIKNNESW 466
            +E +   K+   +
Sbjct: 1102 QERTVARKDLVDF 1114


>gi|330807235|ref|YP_004351697.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375343|gb|AEA66693.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 395

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 73/400 (18%), Positives = 144/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGQDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLRREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L                 L ++  D++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVISLTE--------------GLPADLSDMLRALVGLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    E +    A      ++L+ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLAAARERLAHAPAPVLAALDDLLAIAERLS-VRFPELPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGR 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      +     + +        LR+ G R 
Sbjct: 327 AEVELPSGG------IWMPDSTDAALWQAVCQLRSEGQRV 360


>gi|237798282|ref|ZP_04586743.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331021134|gb|EGI01191.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 395

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 74/399 (18%), Positives = 140/399 (35%), Gaps = 49/399 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               A+L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVVAL--------------TADLPQELASMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +    + +    A      + ++         +    +      +RG  Y+TG V+ 
Sbjct: 223 REVLDAARDRLSAAPAPVLAALDDLLAIADRLAVRFPQLPLYFDLGELRGYHYHTGVVFA 282

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +          P V  S+  GGRYD + + F  +  PATGFS  +  L+   ++    
Sbjct: 283 VFV----------PGVGQSIAQGGRYDDIGADFG-RARPATGFSTDLKTLVTLGQAEIVL 331

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            +    M       +                LR  G R 
Sbjct: 332 PSGGIWMPDSTDAALWQQ----------VCQLRNEGQRV 360


>gi|218195113|gb|EEC77540.1| hypothetical protein OsI_16439 [Oryza sativa Indica Group]
          Length = 1250

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 64/461 (13%), Positives = 145/461 (31%), Gaps = 24/461 (5%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
              + + I++  + +++ +          + S          +   K V  +    G+ + 
Sbjct: 801  SELLDSIIEVSKEVFKRHCAKR-----FQISPLHTLEGKFTENRGKTV-KILTQGGEMLE 854

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L Y+L  P    VA N                      G     +F+Q D D +G ++  
Sbjct: 855  LCYELRTPFVMSVAANQILSFK----RYEVSWVHRRAVGHSIPYRFLQGDFDIIGGASPI 910

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
             +AE+  +  D        +    I +N+ K+ + +    G+  + + N           
Sbjct: 911  PEAEIVKVTLDVGAHFYDPKA-IIIRLNHSKLAEAVCSWAGVPQERRQNVAEFFSS---- 965

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM---VSFLSIDLEKSMHELYELV 259
                     K       +   G   +   L+ E ++ +           ++ +  L   +
Sbjct: 966  -TLVQYWPNKADRKSQWSLIRGQLLQDLRLSEEVVEKLHKADQRFCGSADQVLARLRGTL 1024

Query: 260  KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL--GFPVMN 317
                +  K  +E+    + +R        I I   +     YYT   ++  +  G P  +
Sbjct: 1025 FYDKSACKALDEISAFLKCLRIWSI-EEHITIDVLMPPSECYYTDLFFQIYVKEGNPGSS 1083

Query: 318  EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
              +K +  G              +K +   A G SI + + +    S +     I+    
Sbjct: 1084 SHEKLLAIGGRYDWLIEQAWDRTYKSKPPGAVGVSIALEKFLPNSPSSDIGFPRIEPSIS 1143

Query: 378  VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
            VL+ +       L++       L  A I+A+       +   Q +YA   +    +    
Sbjct: 1144 VLVCSKGGGG-LLNERMELVAELWEANIKAQFVPQEDPSLQEQYEYASDHDIKCLVFITE 1202

Query: 438  GERSR-GMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
               S+  +++++ L   +E   + +             T+ 
Sbjct: 1203 AGVSQTELVKVRHLDAKREKEVKREELSWLPFCEPRLRTVA 1243


>gi|66823241|ref|XP_644975.1| eukaryotic translation initiation factor 2 alpha  kinase
            [Dictyostelium discoideum AX4]
 gi|74857726|sp|Q558U1|IFKA_DICDI RecName: Full=Probable serine/threonine-protein kinase ifkA; AltName:
            Full=Initiation factor kinase A
 gi|60473108|gb|EAL71056.1| eukaryotic translation initiation factor 2 alpha  kinase
            [Dictyostelium discoideum AX4]
          Length = 2258

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 76/493 (15%), Positives = 155/493 (31%), Gaps = 56/493 (11%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK-GVFSLQDD 76
                 +  R +    +  I+ N+G   I+TP L       K   +   P    V    D+
Sbjct: 1534 LTPMHLICREKTFSRLEKIFLNHGSIRIDTPTL-----FPKNPTNSTHPGAANVAKFLDE 1588

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG-PGRFRQFIQCDVDN 135
             G  + L YDLT P AR+V  +               V+R  + G   +       D+  
Sbjct: 1589 SGTVVYLPYDLTIPWARHVVIHNIQQAKRYTF---SKVYRRSQPGFSPKELYECDFDIIG 1645

Query: 136  VGSSAETADAEMCMMMADTLEAVGIK-RNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
               S   +DAE   ++ + +E    +   +     +       I  KI ++    L+  L
Sbjct: 1646 PSKSRHISDAETLRIIIEIMEEFKDELFGNNSGSNSGSGSGGSINYKIRINHYGLLDSIL 1705

Query: 195  IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--KSM 252
                   +      Q V  L             K   L++  +  + ++     E  + +
Sbjct: 1706 SECGVEKRFFTVVYQTVAQLHWRLNWAQVAQSLKEHGLSASIVSNISTYFRQRGELAQCV 1765

Query: 253  HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             +L  L+        G ++L ++   ++       R  +  +++   +YY G V++A + 
Sbjct: 1766 TQLESLLANHKEATTGISDLKILVRNLQMINIIP-RFLLDLSLIHNHQYYEGLVFQAYIE 1824

Query: 313  FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV------PATGFSIGISRLIVALKSLE 366
             P ++    P     +  GGRYD L+                 G ++   +++ ++ +  
Sbjct: 1825 RPTLSN---PSRTEIIMSGGRYDKLIKSLHPNPSLSNNIVSGVGVTLACEKIVNSVLNYR 1881

Query: 367  SSTNNIKEMG---------------------------------PVLITTMDHDSDSLSKY 393
                N                                       + +      S  L + 
Sbjct: 1882 QHLLNNCFNTTYTRRNKDPPNSNNNPNNNNLNNNVSIFTKFQSHIEVFVCSLGSSLLGEK 1941

Query: 394  QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                  L +AGI+A+       +  +          P  +I        G L++K +   
Sbjct: 1942 LQVASQLWSAGIKADYSQTDYYSSEDIYSNCRENGIPWVVILREKAFQIGKLKVKQIETR 2001

Query: 454  KELSREIKNNESW 466
            +E +   K+   +
Sbjct: 2002 QERTVARKDLVDF 2014


>gi|229464990|sp|A4G4L1|HISZ_HERAR RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|193222287|emb|CAL61448.2| ATP phosphoribosyltransferase regulatory subunit [Herminiimonas
           arsenicoxydans]
          Length = 383

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 83/442 (18%), Positives = 147/442 (33%), Gaps = 67/442 (15%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   I + +  YG++ +  P+LEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRLIIDNFHLYGYELVMPPMLEYLESLLAGAGHDMDLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T  +AR  A +        R    G V +   +G    R+ +
Sbjct: 64  FKLIDQLSGRTLGVRADMTTQVARIDA-HLLNRASITRLCYCGSVLQTRPNGLHATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     ADAE+  +   +L   G       I + +  +L  I+          
Sbjct: 123 QIGAEVYGHGGLEADAEIQELALASLALAGFT--QVRIDLCHVGVLRAII---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D   +     +   L         + T      ++    +++   +  +
Sbjct: 171 ---------ASDVQAQKDENALYTFLRAKDVPALQEMTLTYG--ADTRRALLALPGLYGD 219

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +    E++      +   +EL+ +             + I    + G +Y +G ++ 
Sbjct: 220 VTVIARAREILPKLPGIDTALDELIAL-----AGLAGETSVTIDLADLGGYQYESGVMFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +          P +  +V  GGRYD +   F  +  PATGFS+ +  L   L   E  
Sbjct: 275 IYV----------PGLPNAVARGGRYDHVGEAFG-RARPATGFSMDLRELARLLPDAEPK 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                            +    +K       LR AG      L   +N  +Q    D   
Sbjct: 324 LAIRAPW--------GREPALRTK----IGALRKAGEIVIQSLSGHEN--DQ----DEFE 365

Query: 429 CPLAIIQGTGERSRGMLQIKDL 450
           C   ++        G   IK+L
Sbjct: 366 CDRVLV-----LEDGNWIIKNL 382


>gi|291613892|ref|YP_003524049.1| histidyl-tRNA synthetase 2 [Sideroxydans lithotrophicus ES-1]
 gi|291584004|gb|ADE11662.1| histidyl-tRNA synthetase 2 [Sideroxydans lithotrophicus ES-1]
          Length = 385

 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 70/407 (17%), Positives = 132/407 (32%), Gaps = 54/407 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   LP    D   +E      +   +  +    G+  +  PLLEY +SL      +   
Sbjct: 1   MNWLLPEYIQDMLPEEAWRIEVMRRDVLELLRRSGYQLVAPPLLEYVESLLISESQDMDL 60

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               F L D   G+ +++R D+T  +AR  A +        R    G V   +  G  R 
Sbjct: 61  RS--FKLVDQLSGRTLAVRADITPQVARIDA-HLLNRQGVTRLCYAGSVLHTQPAGLMRT 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+ +Q   +  G     +D E+  +M  +L  VGI+    H+ + +  +   ++   G+ 
Sbjct: 118 REPLQIGAELYGHGGIESDLEVQRLMLQSLALVGIEG--VHLDLGHVGVFRALVRNAGID 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + +        R                      D          L  +  D ++    
Sbjct: 176 HELEAALFSAFQR---------------------KDVPALRGLVTGLPQDVQDALMILPQ 214

Query: 246 IDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +    + +    + +      +   +EL   +  ++    +   I +    +RG  Y++G
Sbjct: 215 LYGGVEVIERARKTLPPYPEIKTALDELEQAAAHLKNLARD---IGVDLAELRGYHYHSG 271

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+ A                 ++  GGRYD +   F  +  PATGFS+ + +L   L  
Sbjct: 272 MVFAAY----------HAGSHDAIALGGRYDDVGKAFG-RARPATGFSMDLRQLHGLLSK 320

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
                                     +        LR  G    + L
Sbjct: 321 QGQPKTIHAPYRQD------------AALDAVIAKLREQGEAVVVDL 355


>gi|313639256|gb|EFS04178.1| ATP phosphoribosyltransferase, regulatory subunit [Listeria
           seeligeri FSL S4-171]
          Length = 393

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 69/423 (16%), Positives = 141/423 (33%), Gaps = 53/423 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D   +E +   +I   +   +   GF  IETP++E++D        E++ +  +
Sbjct: 7   LPTGTRDKLFREAQTAYKIEQQVNQYFGKRGFKRIETPIIEFADVFS----SENQADTKM 62

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D+ G+   LR D+T P+ R V+    T+    +    G +FR      G   +  Q
Sbjct: 63  YRFFDEKGRLTVLRPDMTLPIGRVVSTTGVTLP--LKLSYSGKIFRANDDFGGEQNEQTQ 120

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G  +  A+ E  +     L A+  +  ++ I + +  I   ++  + L    ++
Sbjct: 121 AGIEIIGYPSIKAEIECILSGIGVLNAL--EIPNFQIELGHAAIYRRVVHLLNLSETAEI 178

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                                +LL+          F +    T +   + +  L      
Sbjct: 179 -------------------DFRLLIQNKSLTGIQQFVENNPSTLDAFILALPRLFGPANT 219

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + +  +L K                E +  +   +  I +   +V+   YYTG ++   
Sbjct: 220 ILPQAKKLTKDKGILTALTE-----IETIVAAVSYTADINVDLGLVQDFHYYTGIIFRGY 274

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                 N             GGRYD L+ +F   + PA G ++ +  L            
Sbjct: 275 ADLAADN----------FLSGGRYDHLLEQFTTSSSPAVGLALNLDSLTNLQNRAGIIQK 324

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  +                   + L      +E+      +  N + +A +   P
Sbjct: 325 QAATTLLIHYDL---------AALPEAEQLMKRTPNSELSFFEEPS--NAISFAKKWKIP 373

Query: 431 LAI 433
             +
Sbjct: 374 RVV 376


>gi|313634656|gb|EFS01120.1| ATP phosphoribosyltransferase, regulatory subunit [Listeria
           seeligeri FSL N1-067]
          Length = 393

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 69/423 (16%), Positives = 141/423 (33%), Gaps = 53/423 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D   +E +   +I   +   +   GF  IETP++E++D        E++ +  +
Sbjct: 7   LPTGTRDKLFREAQTAYKIEQQVNQYFGKRGFKRIETPIIEFADVFS----SENQADTKM 62

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D+ G+   LR D+T P+ R V+    T+    +    G +FR      G   +  Q
Sbjct: 63  YRFFDEKGRLTVLRPDMTLPIGRVVSTTGVTLP--LKLSYSGKIFRANDDFGGEQNEQTQ 120

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G  +  A+ E  +     L A+  +  ++ I + +  I   ++  + L    ++
Sbjct: 121 AGIEIIGYPSIKAEIECILSGIGVLNAL--EIPNFQIELGHAAIYRRVVHLLNLSETAEI 178

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                                +LL+          F +    T +   + +  L      
Sbjct: 179 -------------------DFRLLIQNKSLTGIQQFVENNPSTLDAFILALPRLFGPANT 219

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + +  +L K                E +  +   +  I +   +V+   YYTG ++   
Sbjct: 220 ILPQAKKLTKDKGILTALTE-----IETIVAAVSYTADINVDLGLVQDFHYYTGIIFRGY 274

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                 N             GGRYD L+ +F   + PA G ++ +  L            
Sbjct: 275 ADLAADN----------FLSGGRYDHLLEQFTTSSSPAVGLALNLDSLTNLQNRAGIIQK 324

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  +                   + L      +E+      +  N + +A +   P
Sbjct: 325 QAATTLLIHYDL---------AALPEAEQLMKRTPNSELSFFEEPS--NAISFAKKWKIP 373

Query: 431 LAI 433
             +
Sbjct: 374 RVV 376


>gi|289433844|ref|YP_003463716.1| histidyl-tRNA synthetase, putative [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289170088|emb|CBH26628.1| histidyl-tRNA synthetase, putative [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 393

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 69/423 (16%), Positives = 142/423 (33%), Gaps = 53/423 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D   +E +   +I   +   +   GF  IETP++E++D        E++ +  +
Sbjct: 7   LPTGTRDKLFREAQTAYKIEQQVNQYFGKRGFKRIETPIIEFADVFS----SENQADTKM 62

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D+ G+   LR D+T P+ R V+    T+    +    G +FR  +   G   +  Q
Sbjct: 63  YRFFDEKGRLTVLRPDMTLPIGRVVSTTGVTLP--LKLSYSGKIFRANEDFGGEQNEQTQ 120

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G  +  A+ E  +     L A+  +  ++ I + +  I   ++  + L    ++
Sbjct: 121 AGIEIIGYPSIKAEIECILSGIGVLNAL--EIPNFQIELGHAAIYRRVVHLLNLSETAEI 178

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                                +LL+          F +    T +   + +  L      
Sbjct: 179 -------------------DFRLLIQNKSLTGIQQFVENNPSTLDAFILALPRLFGPANT 219

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + +  +L K                E +  +   +  I +   +V+   YYTG ++   
Sbjct: 220 ILPQAKKLTKDKGILTALTE-----IETIVAAVSYTADINVDLGLVQDFHYYTGIIFRGY 274

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                 N             GGRYD L+ +F   + PA G ++ +  L            
Sbjct: 275 ADLAADN----------FLSGGRYDHLLEQFTTSSSPAVGLALNLDSLTNLQNRAGIIQK 324

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  +                   + L      +E+      +  N + +A +   P
Sbjct: 325 QAATTLLIHYDL---------AALPEAEQLMKRTPNSELSFFEEPS--NAISFAKKWKIP 373

Query: 431 LAI 433
             +
Sbjct: 374 RVV 376


>gi|300176199|emb|CBK23510.2| unnamed protein product [Blastocystis hominis]
          Length = 271

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 83/236 (35%), Gaps = 13/236 (5%)

Query: 47  TPLLEYSDSLGKFLPD-EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP 105
           TP++E  +   + + +  D  +K +++  D  G+ + LR + T+ + R V  N   +   
Sbjct: 18  TPIVEREELFSRGVGEDSDIVSKEMYTFLDKSGRKLCLRPEFTSSVVRAVL-NNRALDSA 76

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
            R Y  G  +R E    GR+R+F Q   + +  + ++ D E+  +    L  + +     
Sbjct: 77  NRVYYYGSAYRYENPQHGRYREFHQFGGEIIRCNPDSDDTEIISLCHSILRHLDLLPQSE 136

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
            +  +     +  ++          ++    L    +        +++L  +   D +  
Sbjct: 137 LLLNSL--GNEAEMKDYRKALLSYFSKYYDSLSNESQARFDRGSVLRILDSKQPNDQTII 194

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
            T            + SFLS    +    L   +       +    LV   +    
Sbjct: 195 ATS---------PPITSFLSSTSLRRFERLQSDLSDLSIPFRIDPRLVRGLDYYDH 241


>gi|145589463|ref|YP_001156060.1| tRNA synthetase, class II (G, H, P and S) [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|189028233|sp|A4SYD2|HISZ_POLSQ RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|145047869|gb|ABP34496.1| tRNA synthetase, class II (G, H, P and S) [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 387

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 73/395 (18%), Positives = 143/395 (36%), Gaps = 49/395 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    + R    +  +I ++Y++YG++ +  P+LE+ DSL      +       
Sbjct: 6   LPEDIADVLPAQARKVETLRRAILDLYQSYGYELVAPPILEFLDSLLTGTGSDLNL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V +      G  R+ +
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRAGVTRLCYAGSVAQALTPVGGSSREQL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E   ++  TL+  G+K+   ++ +++  IL GILE   L  +  
Sbjct: 123 QLGAEIYGCANGEADFEAITLLLKTLDLAGLKK--VYLDLSHAGILTGILEGQQLDKE-- 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                             ++ +  LL          +            + ++ L+    
Sbjct: 179 -----------------SIETLYGLLQSKDRPRLRQWATCLPAKLAADLLALTELNGPCT 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +    +++    A ++   +L  +     K   +   + I    +RG +Y++G ++ A
Sbjct: 222 EVIANAKKVLPRHAAVDQALADLECVVSAASK-SLSGVELSIDLADLRGYQYHSGVMFAA 280

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            +   +  GGRYD +   F                 +  L     S 
Sbjct: 281 YV----------DGLPQPIARGGRYDQVGKAFG-------RSRPATGFSLDLLTLAGLSP 323

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            N +++    +     D   L++       LR  G
Sbjct: 324 LNCRKLA---VLAPWIDDADLNQ---VIADLRNRG 352


>gi|91788460|ref|YP_549412.1| class II tRNA synthetase [Polaromonas sp. JS666]
 gi|91697685|gb|ABE44514.1| tRNA synthetase, class II (G, H, P and S) [Polaromonas sp. JS666]
          Length = 392

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 107/325 (32%), Gaps = 27/325 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD    E R    +     +   +YG++ +  PLLE+ +SL     +       
Sbjct: 9   QLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTGEALDL--Q 66

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            F L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ 
Sbjct: 67  TFKLVDQLSGRTLGLRADTTPQVARIDA-HLLNRSGVARLCYCGPVLHTRADRPHATREP 125

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +   AD E   +  + L+A G+      + + + +I++ +L    ++   
Sbjct: 126 LQFGAEIYGHAGLEADLEAQSLALEGLKAAGVTA--LSVDMADARIVNSLLAGAAVNAKT 183

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                  +              +K  L     D      +                    
Sbjct: 184 LALIHAALAAKDASELDSLTASLKGSLSAAACDGLKALLQLYG----------------D 227

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           EK + E  +++      +     L  ++  V        ++      +RG  YY+G  + 
Sbjct: 228 EKVLLEAEKVLSSWPDAQNALQNLKWLAAHV-----GDVKVSFDLADLRGYAYYSGTRFA 282

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGR 333
                  +    +    G+V G  R
Sbjct: 283 IYGQGAELARGGRYDEVGAVFGRNR 307


>gi|299821413|ref|ZP_07053301.1| ATP phosphoribosyltransferase regulatory subunit [Listeria grayi
           DSM 20601]
 gi|299817078|gb|EFI84314.1| ATP phosphoribosyltransferase regulatory subunit [Listeria grayi
           DSM 20601]
          Length = 394

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 75/433 (17%), Positives = 145/433 (33%), Gaps = 52/433 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D   +E     ++   + + ++N GF  IETP++E+ D               +
Sbjct: 7   LPAGTNDKLFREAESAFQVEQQVNSFFQNRGFKRIETPIMEFEDVFRASSESA----AAI 62

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   D +G+ I+LR D+T P+ R ++     I  P +    G VFR      G   +  Q
Sbjct: 63  YRFFDSEGRTIALRPDMTLPIGRVIST--AAITLPVKLSYSGKVFRAHPELIGEQNEQTQ 120

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G S+  A+ E  +     L  +     ++ I + +  I   IL+++ L    +L
Sbjct: 121 AGIEIIGFSSLKAELECILSGITILSNLA--IPNFQIELGHAVIYQEILKQLQLDDKTEL 178

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE- 249
                                + LL          F      + +  D ++    +    
Sbjct: 179 I-------------------FRKLLLNKSISGIKTFVAENPSSLD--DFILELPWLFGPA 217

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + + +  +            +EL    +LV +       + I   +++  +YYTG ++  
Sbjct: 218 EEILQKAKQQTDNRGILAALSELGRTVQLVEQV-EPDVALSIDLGLIQDFDYYTGLIFRG 276

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                  +             GGRYD L+ RF G   PA G ++ + +++     +    
Sbjct: 277 YADHASEH----------FLSGGRYDLLLERFGGNPTPAVGLALHLDKIVRLKNKIGQHY 326

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   V              Y         A   AE+           + YA +   
Sbjct: 327 RAKTPDSFVHYGLAQWKEA--EHYL-------AAHPEAELSFFEIP--EESIAYAKKWQI 375

Query: 430 PLAIIQGTGERSR 442
              I+      + 
Sbjct: 376 KRVILINEAGIAE 388


>gi|71736832|ref|YP_272871.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|109892440|sp|Q48NZ8|HISZ_PSE14 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|71557385|gb|AAZ36596.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 395

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 148/400 (37%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAACIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               A+L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVVAL--------------TADLPQELASMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    + + G  A      N+L+ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLDAARDRLAGAPAPVLAALNDLLAIAERLAAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGQ 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G         DS   + +Q   Q LR+ G R 
Sbjct: 327 AEIVLPSGG-----IWVPDSTDAALWQQVCQ-LRSEGQRV 360


>gi|325095608|gb|EGC48918.1| protein kinase [Ajellomyces capsulatus H88]
          Length = 1572

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 85/492 (17%), Positives = 163/492 (33%), Gaps = 59/492 (11%)

Query: 10   ELPRGFADC--------PTK--EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            + PR F D              E+ +++ + + + +I+  +G   IET     S    + 
Sbjct: 951  QPPRKFEDIAWDMDARGTPPVTEVLLQSLVKEKLSSIFRKHGA--IET---TRSTLFPRS 1005

Query: 60   LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
                +    GV  L D  G  + L YDLT P AR ++    +I        +     +  
Sbjct: 1006 ----EHYPSGVVRLLDPSGNLVQLPYDLTLPNARSISRLDSSIEKTFTFGTVYRESIHGG 1061

Query: 120  HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
               G           N    A      M ++     E   ++       IN+  +LD IL
Sbjct: 1062 APRGHHEVDFDMISHNTLDLALKEAEVMKVLDEILNEFPSLRSAPMCFHINHSDLLDAIL 1121

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                +    K   + I+ +    +  + +Q ++  L           +    + S  +D 
Sbjct: 1122 SFCRISPQQKPLVKEIISKL--NIGPYSIQKIRSELR----------SPTIGVASTSVDD 1169

Query: 240  MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRG 298
            +  F   D      +  + ++  + G +  + L  I   +          ++     V  
Sbjct: 1170 LARFDFRDSP---DKALKRLRTIMEGTEFTDRLAPIFARLNAVVSYLKGFRVKRKVYVNP 1226

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFS 352
            L       +   + F  +++ ++  VF     GGRYD L+  F            A GF+
Sbjct: 1227 LSSLNDKFFRGSVLFQCVSDTKRRDVF---AAGGRYDSLIQEFHPKVLYSGNQRHAVGFN 1283

Query: 353  IGISRLIV------------ALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQM 399
            +G  +L +             LK  E+  + I       +     D     +      Q 
Sbjct: 1284 LGWEKLYLSMSNYLKGSNKAFLKQGETEISGIWRSRRCDVLVASFDPAVLRTVGVGVVQD 1343

Query: 400  LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            L   GI AE+ + SS +    +      N    +I       RG L++K+++  +E    
Sbjct: 1344 LWAHGISAELSVDSS-SLEEIITRYRNDNHSWVVIVKQDSMERG-LKVKNISAKEEYEVR 1401

Query: 460  IKNNESWREARV 471
                 +W  + +
Sbjct: 1402 SSELAAWLLSEI 1413


>gi|240274008|gb|EER37526.1| protein kinase [Ajellomyces capsulatus H143]
          Length = 1545

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 85/492 (17%), Positives = 163/492 (33%), Gaps = 59/492 (11%)

Query: 10   ELPRGFADC--------PTK--EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            + PR F D              E+ +++ + + + +I+  +G   IET     S    + 
Sbjct: 924  QPPRKFEDIAWDMDARGTPPVTEVLLQSLVKEKLSSIFRKHGA--IET---TRSTLFPRS 978

Query: 60   LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
                +    GV  L D  G  + L YDLT P AR ++    +I        +     +  
Sbjct: 979  ----EHYPSGVVRLLDPSGNLVQLPYDLTLPNARSISRLDSSIEKTFTFGTVYRESIHGG 1034

Query: 120  HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
               G           N    A      M ++     E   ++       IN+  +LD IL
Sbjct: 1035 APRGHHEVDFDMISHNTLDLALKEAEVMKVLDEILNEFPSLRSAPMCFHINHSDLLDAIL 1094

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                +    K   + I+ +    +  + +Q ++  L           +    + S  +D 
Sbjct: 1095 SFCRISPQQKPLVKEIISKL--NIGPYSIQKIRSELR----------SPTIGVASTSVDD 1142

Query: 240  MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRG 298
            +  F   D      +  + ++  + G +  + L  I   +          ++     V  
Sbjct: 1143 LARFDFRDSP---DKALKRLRTIMEGTEFTDRLAPIFARLNAVVSYLKGFRVKRKVYVNP 1199

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFS 352
            L       +   + F  +++ ++  VF     GGRYD L+  F            A GF+
Sbjct: 1200 LSSLNDKFFRGSVLFQCVSDTKRRDVF---AAGGRYDSLIQEFHPKVLYSGNQRHAVGFN 1256

Query: 353  IGISRLIV------------ALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQM 399
            +G  +L +             LK  E+  + I       +     D     +      Q 
Sbjct: 1257 LGWEKLYLSMSNYLKGSNKAFLKQGETEISGIWRSRRCDVLVASFDPAVLRTVGVGVVQD 1316

Query: 400  LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            L   GI AE+ + SS +    +      N    +I       RG L++K+++  +E    
Sbjct: 1317 LWAHGISAELSVDSS-SLEEIITRYRNDNHSWVVIVKQDSMERG-LKVKNISAKEEYEVR 1374

Query: 460  IKNNESWREARV 471
                 +W  + +
Sbjct: 1375 SSELAAWLLSEI 1386


>gi|330720976|gb|EGG99143.1| ATP phosphoribosyltransferase regulatory subunit [gamma
           proteobacterium IMCC2047]
          Length = 393

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 83/409 (20%), Positives = 151/409 (36%), Gaps = 50/409 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +           +  ++ ++Y+++G+D +  P +E+ +SL   +  +       
Sbjct: 9   LPDGIEEVLPPMAGRVESLRRNLLDLYKSWGYDLVIPPFVEFLESLLTGVGSDLDLK--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +      P R    G V           R  I
Sbjct: 67  FKVTDQLTGRLMGVRADMTPQVARIDA-HSLKHQGPARLCYSGSVLHTRAANMLASRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G S+  AD E+  +M +T+++ G+   D  + I N  I   ++    L    +
Sbjct: 126 QMGAELYGCSSLAADIEVVSLMLETIKSAGLS--DVCLDIGNVAIYRHLVAAADLDKAQE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +  LL          F K    ++     +     +  +
Sbjct: 184 -------------------NVLFALLQRKDKAELRVFLKDQVSSATAAKHLSVLADLHGD 224

Query: 250 KSMHELY--ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           K++ E    ELV       +G   L+ +++ V +  + S  +    + +RG +Y+TG V+
Sbjct: 225 KAVLERAREELVGAAPEVLEGIESLLEMAQAVEQ-SFPSIPLYFDLSELRGYQYHTGIVF 283

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 ++  GGRYD +   F  +  PATGFS         LK+L  
Sbjct: 284 SAYAQ----------GHGQAIAKGGRYDDIGQVFG-RARPATGFSTD-------LKALID 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                 E   V+I    +++  L       + LR AG      L    +
Sbjct: 326 VVAADAEEAAVVIAPAGYEASLL----ELIRDLREAGHVVVRALAGDVS 370


>gi|114330969|ref|YP_747191.1| ATP phosphoribosyltransferase regulatory subunit [Nitrosomonas
           eutropha C91]
 gi|122314122|sp|Q0AHF6|HISZ_NITEC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|114307983|gb|ABI59226.1| tRNA synthetase, class II (G, H, P and S) [Nitrosomonas eutropha
           C91]
          Length = 390

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 142/403 (35%), Gaps = 49/403 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D   ++     +I   + +    +G+  +  PLLEY +SL             +
Sbjct: 6   LPEYIEDVLPRDAYRIEKIRRLVMDKLFVHGYQFVMPPLLEYVESLLAGSGSGMNLR--M 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + LR D+T   AR  A +        R      V         R R+  
Sbjct: 64  FKVVDQLSGRMMGLRADMTPQAARIDA-HLLNTNGVTRLCYASSVVHTVPDEITRTREPF 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G S   +D E+  ++ + L   GI+    H+ + + ++   ++   G+  + +
Sbjct: 123 QVGAELYGHSGIESDLEIQRLLLECLSVSGIQS--IHLDLGHIRVFRSLIYGSGIRPEFE 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           +            L       ++ L+  G  D          L     + ++    +  +
Sbjct: 181 MELYA-------ALWAKDTSALRELVYTGLND----------LDKTVREALLLLPELYGD 223

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++ +    + +       +  ++L  +++ +       +RI      +RG  Y+TG V+ 
Sbjct: 224 ETVLLRARKYLPNFPEIREALDQLEHVAKALE---PYVDRIIFDLADLRGYHYHTGMVFA 280

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 ++  GGRYD +   F  +  PATGFS+        LK L   
Sbjct: 281 AYTQ----------GSPVAIALGGRYDEIGKSFG-RARPATGFSLD-------LKQLSRL 322

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           T+       +L      D +  +      + LR AG      L
Sbjct: 323 TDINDYPRGILAPWKPQDDELAA----MIKQLRIAGHIVVTEL 361


>gi|119474817|ref|ZP_01615170.1| ATP phosphoribosyltransferase regulatory subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119451020|gb|EAW32253.1| ATP phosphoribosyltransferase regulatory subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 398

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 86/404 (21%), Positives = 162/404 (40%), Gaps = 56/404 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +   ++      +   + ++Y+++G+  +  PL+EY++SL   L  +   +   
Sbjct: 9   LPDGVEELLPEQAGQVESLRRKLLDLYQSWGYLLVIPPLIEYTESLLVGLGHD--VDIQT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T   AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVVDQLSGRMMGIRADITPQTARMDA-HSLRGDGPSRLCYAGSVLHTKPKSLMASRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE--KIGLHGD 187
           Q   +  G  +  +D E+  +M +TL   G   +   + + +  I   ++E  ++    +
Sbjct: 126 QIGAELYGDGSLNSDIEVISLMLETLTVSG--IDQITLDLGHVGIYRALIEQSELTADAE 183

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +KL   L    + D         ++  + EG +D            S+  D+M +  +++
Sbjct: 184 EKLFSALQRKSSGD---------IESAIQEGISD------------SKLADMMRALSTLN 222

Query: 248 LEKSMHELYELV--KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            ++S+ +  +++            ++L ++++ +      S  I    T +RG  Y+TG 
Sbjct: 223 GDRSILDKAKVLLGAAPAQVLSVIDDLSLVADQITSR-MPSVNIYFDLTELRGYHYHTGL 281

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+ A+           P    ++  GGRYD +   F  +  PATGF+         LK+L
Sbjct: 282 VFSALA----------PGHGQAIANGGRYDDIGEVFG-RARPATGFNTD-------LKAL 323

Query: 366 ESSTNNIKEMGPVLITTMDH-----DSDSLSKYQMYTQMLRTAG 404
                       V            DSDSLS +Q   Q LR  G
Sbjct: 324 LGYLPKNSSDESVYSILAPDSYGLSDSDSLSLWQTI-QQLRANG 366


>gi|221066044|ref|ZP_03542149.1| histidyl-tRNA synthetase 2 [Comamonas testosteroni KF-1]
 gi|220711067|gb|EED66435.1| histidyl-tRNA synthetase 2 [Comamonas testosteroni KF-1]
          Length = 382

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 75/396 (18%), Positives = 135/396 (34%), Gaps = 56/396 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +   +YG++ +  P+LEY +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLLDTARSYGYELVMPPMLEYLESLLTGTGEALAL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + LR D+T  +AR  A +        R    GPV       P   R+  
Sbjct: 64  SKLIDQLSGRTMGLRADMTQQVARIDA-HLLNRKGVTRLCYCGPVVHARPDRPRATREPF 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     AD E   +  D L+  G+K  D  + + + +I+  +L  + +     
Sbjct: 123 QFGAELYGHEGLEADLEALHLALDCLKGAGVK--DVIVDLADVRIVRSLLAGVMVDEQV- 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                             L+GV   L           T+         + +++ L +   
Sbjct: 180 ------------------LRGVHAALASKDATELAQLTRDFP--EASREGLMALLQLYGG 219

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  +L+  T       + L  + + +        ++      +RG  YY+G  + 
Sbjct: 220 MEVLDQAEKLLDRTAGVRNVLSHLRWLVQRLD-----GVKVSFDLADLRGYSYYSGTRFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +          P    ++  GGRYD + + F  +N PA GFS+ I +L+  +      
Sbjct: 275 IYV----------PGGSDALVRGGRYDEVGAVFG-RNRPAAGFSLDIKQLVAVVPERPLK 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                              D +         LR  G
Sbjct: 324 AAIRAPW-----------GDDVQVAAAIAA-LRQQG 347


>gi|92113407|ref|YP_573335.1| ATP phosphoribosyltransferase regulatory subunit [Chromohalobacter
           salexigens DSM 3043]
 gi|123387509|sp|Q1QY22|HISZ_CHRSD RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|91796497|gb|ABE58636.1| tRNA synthetase, class II (G, H, P and S) [Chromohalobacter
           salexigens DSM 3043]
          Length = 393

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 70/399 (17%), Positives = 134/399 (33%), Gaps = 49/399 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    +     ++  ++ ++Y+ +G+D +  P +E+ DSL      +       
Sbjct: 9   LPDGMDEVLPPQATRMEQLRRALLDLYDRWGYDLVIPPTVEFLDSLLTGTGTDLDL--QT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ +    D+T  +AR  A +      P R      V R +       R   
Sbjct: 67  FKLTDQLSGRMMGASADVTPQVARMDA-HSLKRSGPARLCYCTTVLRAKADKHQGGRSPT 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+  G +   AD E+  +    LE  G    + H+ + +  I   ++    L  + +
Sbjct: 126 QVGVELFGHAGLDADIEVVRLALTGLEVAG--AGEVHLALGHIGIYRALVHAAALSAESE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                 + R            V  L+    +D               +D++ +   +   
Sbjct: 184 QALFEAIER-------KAFNDVDALVARDVSD------------PALVDMLQALPRLYGG 224

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++ + +  E+  G         + +          +    + +    +RG  Y+TG V+ 
Sbjct: 225 QEVLDQAREVFAGAPPAVMAALDELQALCRAVTDNHLRAEVYLDLAELRGYLYHTGMVFA 284

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P    ++  GGRYD     F          + G S  +  L SLE S
Sbjct: 285 AYV----------PGYGQALAKGGRYDDTGRAF-----GRARPATGFSMDLKLLASLEES 329

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                 +           +D  +  +     LR +G R 
Sbjct: 330 GPRCDGIWAP--------ADERAGLEDAIARLRASGERV 360


>gi|307545950|ref|YP_003898429.1| ATP phosphoribosyltransferase regulatory subunit [Halomonas
           elongata DSM 2581]
 gi|307217974|emb|CBV43244.1| ATP phosphoribosyltransferase regulatory subunit [Halomonas
           elongata DSM 2581]
          Length = 465

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 126/399 (31%), Gaps = 50/399 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    +      +  ++ ++Y  +G+D +  P +E+ DSL      E       
Sbjct: 76  LPDGMDEVLPPQASRMEELRRALLDLYHGWGYDQVMPPPVEFLDSLLTGTGTELDL--QT 133

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ +    D+T  +AR  A +      P R      V R +       R  +
Sbjct: 134 FKLTDQMTGRMMGASADVTPQVARMDA-HSLKRQGPVRLCYCANVLRAKADQYQGGRSPV 192

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++  G +   AD E+  +   +L   G    + H+ + +  I   ++E   L  + +
Sbjct: 193 QVGLELFGHAGLEADLEILRLALTSLSVAG--AGEVHLALGHIGIYRSLVEAAELSSEQE 250

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                                V   L            +         D+  + + +   
Sbjct: 251 R-------------------AVFEALELKSPGALSSRVEECVADPALADMFRALVRLHGG 291

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + E  E             + +        + +           +RG +Y+TG ++ 
Sbjct: 292 PEVLDEAREAFAEAPQAVGAALDQLRALHRGVMAEHPEVEFYFDLAELRGYQYHTGMMFS 351

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P    ++  GGRYD     F  +  PATGFS            L+  
Sbjct: 352 AYV----------PGYGQALAKGGRYDDTGRAFG-RARPATGFS----------LELKLL 390

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                            + + L++     + LR  G R 
Sbjct: 391 ATLTPREPRGDGIWAPAEGEGLAEA---VKALRQRGERV 426


>gi|77166044|ref|YP_344569.1| ATP phosphoribosyltransferase regulatory subunit [Nitrosococcus
           oceani ATCC 19707]
 gi|254436365|ref|ZP_05049871.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Nitrosococcus oceani AFC27]
 gi|109892437|sp|Q3J807|HISZ_NITOC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|76884358|gb|ABA59039.1| tRNA synthetase, class II (G, H, P and S) [Nitrosococcus oceani
           ATCC 19707]
 gi|207088055|gb|EDZ65328.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Nitrosococcus oceani AFC27]
          Length = 397

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 145/398 (36%), Gaps = 48/398 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E     R    + +++ ++G+D +  PL+EY +SL   +  +       
Sbjct: 9   LPEGVGELLPIEAEQMERARRVLIDLFHSWGYDLVVPPLIEYLESLLTGVGTDLEL--QT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T  +AR +A +        R   IG V      G G  R  I
Sbjct: 67  FKLTDQLTGRLMGVRADITPQVAR-IAAHCIQRKGVTRLCYIGSVLHTLSQGLGGTRNPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G S   +D E+  +  + L+ VG+K    H+ + +  I   ++ +  L  +++
Sbjct: 126 QVGAELYGHSGTESDLEVLRLALEALDVVGVK--QVHLDLGHVGIFRDLVLQANLSPEEE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                               G+  +L     D      +  ++  +   + ++  S++  
Sbjct: 184 Y-------------------GLFNILQRKARDEIDTMLRNRDVGPQLRHMFMALTSLNGG 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + + +  E V      E+    L      +         +      +RG  Y+TG V+ A
Sbjct: 225 REVLDEAEQVLAGSGVEQALTTLKE-VATLTDKYLPRVPMHFDLGELRGYRYHTGLVFAA 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +          P    +V  GGRYD +   F     PATGFS+ +  L+          
Sbjct: 284 YI----------PGRGQAVAQGGRYDDIGQVFGRAQ-PATGFSMDLKELVTL-------- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                     +      S++    +   + LR  G R 
Sbjct: 325 --GSSTTTTRLGIFAPWSEAPGFEREVAR-LRQQGERV 359


>gi|87124439|ref|ZP_01080288.1| tRNA synthetases, class-II (G, H, P and S) [Synechococcus sp.
           RS9917]
 gi|86168011|gb|EAQ69269.1| tRNA synthetases, class-II (G, H, P and S) [Synechococcus sp.
           RS9917]
          Length = 392

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 69/409 (16%), Positives = 143/409 (34%), Gaps = 45/409 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++   +R+ + +  +Y  +G++ +  P +E  D+L          
Sbjct: 1   MALQPAAGARDLNPQQVEHNHRLRERLAAVYRRWGYEEVAPPRVERLDTLKAGGG---IA 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +  L     + + LR ++TA +AR  +  F     P R +  G VF N +   GR  
Sbjct: 58  SEDIVRLV--ADEPLGLRPEMTASIARAASTRFAKRSRPLRLWASGTVFENRQADEGRQC 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              +         A    AE+ ++                       +L   L  + L G
Sbjct: 116 IEEKLHSGVELFGANAISAELELLT----------------------LLMDALASLDLQG 153

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D ++   L     +  +        +  +            +  +L +  ++ +   + +
Sbjct: 154 DPQVRLLLGHADLMTLILAPFRSPEREAIRIALMRYDRLSLEALDLDTTTMERLTRLMDL 213

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVR-KSGYNSNRIKISSTIVRGLEYYTGC 305
             E   + + E +K     +   +EL  + E +   +      +++  +       Y G 
Sbjct: 214 RGEP--NTVLETLKRLFGPQPSLSELERLFEHLTPLAQEQGVTLQLDPSFQSHYGLYDGL 271

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF--KGQNVPATGFSIGISRLIVALK 363
           V++ I                 V  GGRYDGLV RF  +G +    GFS  +  +     
Sbjct: 272 VFQLICQGQS--------APVVVARGGRYDGLVKRFGARGGDGAGVGFSFCLDDIRDLPY 323

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           SL +S  + +      +      +  L +     + L   G +AE+ L 
Sbjct: 324 SLAASAASERR-----VLVCHGPNQRLEEAIAEQRRLHGQGHQAELALE 367


>gi|330927319|ref|XP_003301834.1| hypothetical protein PTT_13426 [Pyrenophora teres f. teres 0-1]
 gi|311323183|gb|EFQ90075.1| hypothetical protein PTT_13426 [Pyrenophora teres f. teres 0-1]
          Length = 365

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 87/400 (21%), Positives = 157/400 (39%), Gaps = 48/400 (12%)

Query: 100 DTIVFPCRTYRIGPVFRNEKH--GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
              +   + ++IG V+R ++     GR R+F QCD D  G   ++   +  ++     E 
Sbjct: 1   MNNIRTMKRFQIGKVYRRDQPSLEKGRMREFFQCDFDYAGDQCDSMVPDAEVLCIAA-EV 59

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
               + D  I +N+R ILDG    +G+      +    +  A+DKLDK     V+  + E
Sbjct: 60  FEALQLDIVIKVNHRLILDGFFSALGVP----TSLLRPISSAVDKLDKLPWPEVQKEMVE 115

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSID------LEKSMHELYELVKGTIAGEKGFNE 271
                         L       +  +L  +       + S      L+   +  +KG  E
Sbjct: 116 K------------GLDVNLATKLGEYLQRNKEVGPASKLSALMSDPLLSANLDIQKGMGE 163

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           + ++ + ++  G  ++ I+   ++ RGL+YYTG +YE +L           V  GS+  G
Sbjct: 164 MELLMQYLKAYGV-ADHIQFDLSLARGLDYYTGVIYEVVLPVGKTG-----VYVGSIAAG 217

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           GRYD LVS F  +N+P  G S GI R++  LK          +     I     D   + 
Sbjct: 218 GRYDNLVSMFSNRNIPCVGISFGIDRILTLLKDRRQPKTQRSDS---WIVIASSDKVLVE 274

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
           +     + +R AGI  +    + K    Q+  A++      +     + + G  ++K L 
Sbjct: 275 QRMALAREMRLAGISVDFDAKAYKKPRKQMDIAEKS-ATTVVFLDLDDAAPGKTRLKILT 333

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                           +       +  + L+  V+K L +
Sbjct: 334 -------------PPNKNPDNAPIVDRTNLIGEVRKHLAQ 360


>gi|94311035|ref|YP_584245.1| ATP phosphoribosyltransferase regulatory subunit [Cupriavidus
           metallidurans CH34]
 gi|122987913|sp|Q1LLK0|HISZ_RALME RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|93354887|gb|ABF08976.1| tRNA synthetase, class II (G, H, P and S), ATP
           phosphoribosyltransferase (ATP-PRTase) [Cupriavidus
           metallidurans CH34]
          Length = 383

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 72/427 (16%), Positives = 143/427 (33%), Gaps = 55/427 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 7   LPENIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYLESLLTGTGHDLDLR--T 64

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 65  LKLVDQLSGRTLGLRADITPQVARIDA-HLLNRPGVTRLCYAGNVLHARPAGFNATREPI 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M   L+  G+   D  + + +  IL+ +L  +       
Sbjct: 124 QIGAEIYGHAGLEADVEIQELMLAALQVAGLS--DIRLDLCHAGILEALLAALPS----- 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                          +   + +   L         + T+   L   + D +++  ++   
Sbjct: 177 --------------IRQIEEAMFAALETKDVPALRELTQ--GLPDTERDALLALPTLYGG 220

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +      +  + A  +      +       +  ++  + I  + +RG  Y++G ++ 
Sbjct: 221 VEVIERARATLPASPAIGRA-----LDELAALAAQVSNASVNIDLSDLRGYHYHSGVMFT 275

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +            +   V  GGRYD +   F               R + AL  +E  
Sbjct: 276 AYVS----------GLPNYVARGGRYDKVGEAFGRAR--PATGFSLDLREVAALSPVEVR 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGSSKNFGNQLKYADRR 427
              I              +   +  ++  Q L   G   E+      +    QL+   R+
Sbjct: 324 AQAIFAPWDADPALRFAITTLRANGEIVIQSL--PGHTHELDEFNCDR----QLQ---RQ 374

Query: 428 NCPLAII 434
                ++
Sbjct: 375 GANWVVV 381


>gi|302038731|ref|YP_003799053.1| ATP phosphoribosyltransferase regulatory subunit [Candidatus
           Nitrospira defluvii]
 gi|300606795|emb|CBK43128.1| ATP phosphoribosyltransferase, regulatory subunit [Candidatus
           Nitrospira defluvii]
          Length = 369

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 62/304 (20%), Positives = 110/304 (36%), Gaps = 27/304 (8%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G +       R   ++  ++  +    G++ I  P+ EY D L   L  E    +  
Sbjct: 19  IPVGMSTILPDAARRIRQLEQTLLAVLARGGYEEIILPMFEYLDVLAPGLESELI--EKC 76

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           + L D   G+ + LR D TA +AR VA        P R      VFR E+   GR R+  
Sbjct: 77  YQLVDRTTGRLMLLRPDATAQIARTVAMGMMGEGLPLRLCYRTSVFRYEREHAGRDREIF 136

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   + +G      DAE+  ++ + L  VG+    + + + +      +L K GL  +  
Sbjct: 137 QVGAELIGVDGVAGDAEVLTLLLECLAQVGLSS--FKVAVGHVGFFTALLAKSGLSLE-- 192

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                            G + V+            +      +      +++  L +   
Sbjct: 193 -----------------GQKRVEQAAARKDMPLLEELLAREGIPRSTGRVILEVLELCGG 235

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +    +LV       K  + L  + E +   G  +  I +     RG EYY G V++
Sbjct: 236 PEVLARGRKLVGRDRTLLKPLDRLAQVHERLVSPGQQAVLIDLGEF--RGFEYYDGIVFD 293

Query: 309 AILG 312
               
Sbjct: 294 VFAP 297


>gi|281338239|gb|EFB13823.1| hypothetical protein PANDA_001084 [Ailuropoda melanoleuca]
          Length = 1603

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 91/498 (18%), Positives = 187/498 (37%), Gaps = 68/498 (13%)

Query: 12   PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            P+GF     +  +I+  + D+I  I++ +G   + TPLL                N+ ++
Sbjct: 1025 PKGF---SIRTSKIQQHVCDTIVRIFKRHGAVQLCTPLL-------------LPQNRQIY 1068

Query: 72   S------LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
                     D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      
Sbjct: 1069 EHNEAALFMDHSGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHP 1125

Query: 126  RQFIQCDVDNVGSSAETADAE---MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            ++ ++C  D V S+  ++      +  +     E   ++  +Y I +N+  +L  IL   
Sbjct: 1126 KELLECAFDIVTSTTNSSLPTAEVIYTICEIIQEFPALQERNYSIYLNHTMLLKAILLHC 1185

Query: 183  GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            G+  +DKL++  ++L                +  +             +L+S  +  +  
Sbjct: 1186 GIP-EDKLSQVCVILYD-------------AVTEKLTRREVEAKFYNLSLSSNSLCRLYK 1231

Query: 243  FLSIDLEKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE- 300
            F+    +  + +L   +   I  + G  +LV    + + +      ++ I   ++  L  
Sbjct: 1232 FIEQKGD--LQDLTPAINSLIKQKTGVAQLVKYGLKDLEEIVGLLKKLGIKLQVLINLGL 1289

Query: 301  -YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRL 358
             Y        I  F  +  +++  V   +  GGRYD L+ +F+G         ++G+S  
Sbjct: 1290 VYKVQQHNGVIFQFVAVIRRRQRAVSEILAAGGRYDLLIPQFRGPQALGPIPTAVGVSIA 1349

Query: 359  IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            I  + +   +      +    +  +     S+S+    TQ L +AGI A++    S++  
Sbjct: 1350 IDKISAAILNMEEPVTISSCDLLIVSVGQMSMSRAINLTQKLWSAGITAQIMYDWSQSQE 1409

Query: 419  NQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREARVAQITIP 477
               +Y          +        G  +++K                S+ + R  +  + 
Sbjct: 1410 ELQEYCRHHEITYVALVSD---KGGSYVKVK----------------SFEKERQTEKHVQ 1450

Query: 478  ISELVSTVKKILQENKEE 495
             S+L+  V + L+    +
Sbjct: 1451 ESDLIDHVLQKLRTKVSD 1468


>gi|206602882|gb|EDZ39363.1| Histidyl-tRNA lygase [Leptospirillum sp. Group II '5-way CG']
          Length = 437

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 75/427 (17%), Positives = 144/427 (33%), Gaps = 47/427 (11%)

Query: 1   MGKKTKLRA-----------ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPL 49
           M K                   P+G     ++    R      +  ++  +G+  I  P+
Sbjct: 1   MKKPQSPAPLPTNGEKITRGHTPKGVGPVFSRIASFRRETTSRLLRLFSLWGYTEITLPV 60

Query: 50  LEYSDSLGKFLPDEDRPNKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
            EY DSL   L  +       ++LQD   G  + LR D TA +AR VA+  +      + 
Sbjct: 61  FEYLDSLAPGL--DPVLQHKAYTLQDRGSGHVLLLRPDATAQIARLVAQGQENATEVQKY 118

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
                VFR+E       R+ +Q  ++  G  +  AD E+  +  + +  +    +   + 
Sbjct: 119 AYSTTVFRHED-HHILERELLQTGIELFGVPSAEADWEILALCREGVRIL--HLDSPLLS 175

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
           +++  +    L+  G +    L   L                ++    EG   +  +   
Sbjct: 176 LSHTGLQKAFLQYAGQNLSAPLQSGLQRSFYAHDAIAMKEILLEGGKKEGVLLDVLEKIV 235

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           G   ++ +   ++  L             +   +    +  + L  I  LV       N 
Sbjct: 236 GRTHSAPEAIRILDRL------------PVFSSSPDLSRNASSLSRILHLVEAF---QNE 280

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           I++   +  G  YY+G V+                    +  GGRYD ++    G+++PA
Sbjct: 281 IRVDFALNPGGPYYSGMVFHLYA----------RGTNQELASGGRYD-MLPSLFGKSMPA 329

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           TGF+      +  ++SL     +      + I  +  D     K       LR  G  + 
Sbjct: 330 TGFAFH----LNRIESLLGYEESEMSKTHLDIQFVGTDKSIKDKLIDCAAKLREKGYPSS 385

Query: 409 MFLGSSK 415
                + 
Sbjct: 386 FRFDENP 392


>gi|310825986|ref|YP_003958343.1| histidine-tRNA ligase (histidyl-tRNA synthetase) [Eubacterium
           limosum KIST612]
 gi|308737720|gb|ADO35380.1| histidine-tRNA ligase (histidyl-tRNA synthetase) [Eubacterium
           limosum KIST612]
          Length = 417

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 152/401 (37%), Gaps = 42/401 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
              GF +   +      +I +++  ++E YG+ PI TP  E  D    +  ++   +  +
Sbjct: 6   TIDGFENIQYQGYPALQKIENNLGQLFELYGYHPISTPTFEAYDL---YAAEDSIASDDL 62

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           F L +  G+ ++L+ D T  + R  A N        +   +  ++R+        ++  Q
Sbjct: 63  FKLVNHQGKVLALKPDATLAVTRMAAINHHDPDEIIKFSYLTNIYRSFASPESVKKEMTQ 122

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+  G+++   D E+  +  ++L  +  +  D HI + +   ++ +++++     +K 
Sbjct: 123 MGVEYFGNNSPECDGEIIALAIESL--LSNRIEDVHIDLGHVGFINHLMDELAFSVKEKT 180

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE- 249
                               +   +      + G+F    NL ++   I++    +  E 
Sbjct: 181 Q-------------------LFKYIENKNIGDIGEFLNRKNLNAKVAAIILKLPKLYGEP 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + + +  E +    A  +  ++L  I   +  +GY    I         + YY+  +++ 
Sbjct: 222 QQVFKKMEALCINDAMRRVVDKLKAIYHHLEVTGYAK-YISFDLGFTNQMNYYSDLIFKG 280

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +                V  GGRY+ L  +F   + PA GF I + +++  ++      
Sbjct: 281 YINNWG----------EPVINGGRYNHLSEKFGI-SRPACGFGIDLLKMMEYMEQYHLLP 329

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            + K    +L        +   +      +LR  G   E+F
Sbjct: 330 QSEKRKTIILYAP-----EDKCEGYKTAGILRQKGQPTELF 365


>gi|225352757|ref|ZP_03743780.1| hypothetical protein BIFPSEUDO_04387 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156364|gb|EEG69933.1| hypothetical protein BIFPSEUDO_04387 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 293

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 84/315 (26%), Positives = 125/315 (39%), Gaps = 25/315 (7%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR-TDNSGD 225
           +  NNRK+ +G    +GL   +       VLR IDKLDK G   V  LL EG   D +  
Sbjct: 1   MHANNRKLSEGFYRGLGLTDVE------GVLREIDKLDKIGADEVAKLLVEGCGADENQA 54

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
                       D        D     H +    +  +   +G + L +I +    +   
Sbjct: 55  RACLELAELTAADGAELSGKFDTLCEKHGIANDSEAYVLARQGLDTLAMIVD--EAARIR 112

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
              +     I RGL+YYTG VYE  L              GS+  GGRYD L S+   + 
Sbjct: 113 PGSVIADLKIARGLDYYTGSVYETFLDGAA--------ALGSICSGGRYDNLASQ-GNRK 163

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
            P  G SIG+SRL+  +     +  N      VL+   + +    S        LR  GI
Sbjct: 164 YPGVGLSIGLSRLVSYMLHTAGAHANRVSPASVLVAVWNEED--RSASNQIANQLRARGI 221

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A++   ++K  G Q+KYAD+   P               ++K++  G +   +  N +S
Sbjct: 222 AADVAPTAAK-LGKQIKYADKLGIPYVWFPADKSAQDASDEVKNIITGDQ---QPANAQS 277

Query: 466 WREARV-AQITIPIS 479
           W    V AQ T+ + 
Sbjct: 278 WEPDTVYAQQTVTVE 292


>gi|225557877|gb|EEH06162.1| cpc-3 protein [Ajellomyces capsulatus G186AR]
          Length = 1588

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 84/492 (17%), Positives = 163/492 (33%), Gaps = 59/492 (11%)

Query: 10   ELPRGFADC--------PTK--EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            + PR F D              E+ +++ + + + +I+  +G   IET     S    + 
Sbjct: 967  QPPRKFEDIAWDMDARGTPPVTEVLLQSLVKEKLSSIFRKHGA--IET---TRSTLFPRS 1021

Query: 60   LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
                +    GV  L D  G  + L YDLT P AR ++    +I        +     +  
Sbjct: 1022 ----EHYPSGVVRLLDPSGNLVQLPYDLTLPNARSISRLDSSIEKTFTFGTVYRESIHGG 1077

Query: 120  HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
               G           N    A      M ++     E   ++       IN+  +LD IL
Sbjct: 1078 APRGHHEVDFDMISHNTLDLALKEAEVMKVLDEILNEFPSLRSAPMCFHINHSDLLDAIL 1137

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                +    K   + I+ +    +  + +Q ++  L           +    + S  +D 
Sbjct: 1138 SFCRIKPQQKPLVKEIISKL--NIGPYSIQKIRSELR----------SPTIGVASTSVDD 1185

Query: 240  MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRG 298
            +  F   D      +  + ++  + G +  + L  I   +          ++     V  
Sbjct: 1186 LARFDFRDSP---DKALKRLRTIMEGTEFTDRLAPIFARLNAVVSYLKGFRVKRKVYVNP 1242

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFS 352
            L       +   + F  +++ ++  VF     GGRYD L+  F            A GF+
Sbjct: 1243 LSSLNDKFFRGSVLFQCVSDTKRRDVF---AAGGRYDSLIQEFHPKVLYSGNQRHAVGFN 1299

Query: 353  IGISRLIV------------ALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQM 399
            +G  +L +             LK  E+  + I       +     D     +      Q 
Sbjct: 1300 LGWEKLYLSMSNYLKGSNKAFLKQGETEISGIWRSRRCDVLVASFDPSVLRTVGVGVVQD 1359

Query: 400  LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            L   GI AE+ + +S +    +      N    +I       RG L++K+++  +E    
Sbjct: 1360 LWAHGISAELSVDAS-SLEEIITRYKNDNHSWVVIVKQDSMERG-LKVKNISAKEEYEVR 1417

Query: 460  IKNNESWREARV 471
                 +W  + +
Sbjct: 1418 SSELAAWLLSEI 1429


>gi|68069511|ref|XP_676667.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56496468|emb|CAH97770.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 552

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 69/513 (13%), Positives = 151/513 (29%), Gaps = 74/513 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K  +     +G       + + R  + +  ++I  ++ +   + P+LE  +   K     
Sbjct: 54  KKIISVNSIKGIRTFDQTQYKKREYLFNIWKDIARSFSYTFYDLPILESYELFQK----- 108

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR-----TYRIGPVFRNE 118
                  +     + + + LR ++T  L  Y+      +                   + 
Sbjct: 109 -NNINEYYDFI-KNKRHLILRPEITPQLINYLFFKNGGLKKKKEQNIPTCRDNCNCISSH 166

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV--GIKRNDYHIGINNRKILD 176
             G    +            +       +                R +       R+   
Sbjct: 167 ISGKNNSKNLYSYQKKCRHKNDNQKQYMLQNFKKTFKMCTIGQCFRYEQISNYRKREHYQ 226

Query: 177 GILEKIGLHGDDKLNE---------RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
             ++ IG++  +   E         + + L   D       Q +K ++ E   ++   + 
Sbjct: 227 WNMDIIGINNINAEIELFTILLTFFKKVKLSEKDITKMDNKQIIKSIIYETYKNSLLYYC 286

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
               +    +   +  L    + S +    L++  I   K  +     + +   + Y+  
Sbjct: 287 SQKQIDEIVVKKTLHILDKYNKISKYNFKLLLQKNIPFIKYNDISNFNNIIYNINTYDDI 346

Query: 288 RIKISST------------------------------IVRGLEYYTGCVYEAILGFPVMN 317
            I  +                                 VRGL+YY   ++E      +  
Sbjct: 347 EIFFNFNTNNSNNNSLKNILNYFKKLNLHTYFKIDLATVRGLDYYQNTIFEIFYKNKIN- 405

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
                    ++ GGGRYD         N+PA GF +G   +   L + E++ N I E   
Sbjct: 406 --------RAICGGGRYD---FILNKTNIPAIGFGMGDVVISEILFNKENACNIIDENIN 454

Query: 378 VLITTMDHDSDS-------LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
           ++    + ++D+         +Y      LR   I+    L +       LK A+     
Sbjct: 455 IVSFFPNINNDNIKLKNNKYKEYYDILHTLRMNNIKIYTLLQNDLTLSKALKKANSFKSD 514

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             +     E       +K+L  G +    ++N 
Sbjct: 515 YFLFCQENE--ENNFILKNLKTGYQQIVNLENI 545


>gi|192358954|ref|YP_001983528.1| ATP phosphoribosyltransferase, regulatory subunit [Cellvibrio
           japonicus Ueda107]
 gi|229464971|sp|B3PDB6|HISZ_CELJU RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|190685119|gb|ACE82797.1| ATP phosphoribosyltransferase, regulatory subunit [Cellvibrio
           japonicus Ueda107]
          Length = 396

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 74/399 (18%), Positives = 132/399 (33%), Gaps = 49/399 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E +  + +   + ++Y  +G+D +  PLLEY+DSL      +       
Sbjct: 14  LPEGVEEILPGEAKAIDSLRRKLLDLYSAWGYDMVIPPLLEYTDSLLTGSGRDIDL--LT 71

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             + D   G+ + +R D+T   AR  A +        R    G V       P   R  I
Sbjct: 72  LKVTDQLSGRTLGIRADITPQTARMDA-HSFNRQGANRLCYAGHVVHARPKNPLATRTPI 130

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++  G +   AD E+  ++ ++L+  G+     HI + +  I   I           
Sbjct: 131 QAGIEFYGEADLAADIEVVSLLLESLQVAGL--PRLHIDLGHVGIYRAIANDA------- 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DL 248
                        L     Q    LL          + +    ++++    +   S+   
Sbjct: 182 ------------GLTTAQEQEFFELLQRKAVTEIHAWVEANIPSADKAAAFILLPSLAGG 229

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +                 + L  ++ +V    Y S  +      VRG  Y TG V+ 
Sbjct: 230 IEVLDRARSQFAHLPQVIDALDHLQQLAAVVMAR-YPSAELYFDLGEVRGYHYLTGIVFA 288

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A            P     +  GGRYD +   F          + G +  I AL  L   
Sbjct: 289 AFA----------PGYGNPIASGGRYDHIGEVF-----GRARPATGFAVDITALSKLG-- 331

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                 +G   ++ +  + +   +     + LR  G R 
Sbjct: 332 -----FIGQHDVSAIAVEVNQDPQQWAAIKALRARGERV 365


>gi|91775937|ref|YP_545693.1| tRNA synthetase, class II (G, H, P and S) [Methylobacillus
           flagellatus KT]
 gi|123254381|sp|Q1H0Y5|HISZ_METFK RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|91709924|gb|ABE49852.1| tRNA synthetase, class II (G, H, P and S) [Methylobacillus
           flagellatus KT]
          Length = 387

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 73/403 (18%), Positives = 146/403 (36%), Gaps = 54/403 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D    E     ++  S+ ++++ +G+  +  P++EY +SL   +  +       
Sbjct: 6   LPEYIEDVLPAEAARVEQLRRSLLDLFKVHGYLYVIPPMMEYMESLTTGIGHDLDI--AT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T   AR  A +        R    G V R    G  R R+ +
Sbjct: 64  FKVVDQLTGKLMGIRADITPQTARIDA-HMLNNQGVTRLCYAGSVLRTSPDGLARSREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
               +  G +   +D E+  +M   L  VG+  +  +I +++  I   +LE  G+    +
Sbjct: 123 HVGAELYGHAGVESDIEIQRLMIKALHTVGL--DTLYIDVSHVGIFASLLEHAGIGEAQE 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                        L       V+ L              G  L  + ++ + S   +  +
Sbjct: 181 QELYA-------ALQSKDQAAVRAL--------------GRGLNPDTLEALSSLTELSGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S + +  + +  T   ++   +L  +   +        ++      +RG  Y++G V+ 
Sbjct: 220 ISVLEQAAKRLPQTEKIQQALRDLKAVGAGLDD---LDVKVCFDLAELRGYHYHSGIVFA 276

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                G +  GGRYD + + F  +  PATGFS+ +  ++ +L   E  
Sbjct: 277 AYAQGYA----------GPLARGGRYDEVGAIFG-RARPATGFSLDLRGVVSSLPVAE-- 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
                      +  +   + +        + LR  G      L
Sbjct: 324 ----------TVGAIFAPAIADDALIFVVESLRAQGQVVIQDL 356


>gi|331005104|ref|ZP_08328507.1| ATP phosphoribosyltransferase regulatory subunit [gamma
           proteobacterium IMCC1989]
 gi|330421073|gb|EGG95336.1| ATP phosphoribosyltransferase regulatory subunit [gamma
           proteobacterium IMCC1989]
          Length = 398

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 136/356 (38%), Gaps = 39/356 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    + +   ++   + ++Y  +G++ +  PLLE+++SL   +  +       
Sbjct: 9   LPDGVEEILPAQAQGVEQLRRQLLDLYRCWGYELVIPPLLEFTESLFSGVGHDLEL--LT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             + D   G+ + LR D+T   AR  A +        R      V       P   R  +
Sbjct: 67  LKVTDQLSGRTMGLRADMTPQAARMDA-HSFMRNGVNRLCYADHVLHATPKTPLAIRTPL 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+  G +   AD E+  ++ ++L AV ++     + + +  I   + + + +    +
Sbjct: 126 QVGVELFGEAGLEADIEVISLLLESLIAVDVQ--TITLDLGHVGIYSALTDSLNISESQE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +  LL          + K    + E  + +++  ++  +
Sbjct: 184 -------------------SELFALLQTKDQSEIQQWIKTNIDSEEAGEWLLALTTLSGD 224

Query: 250 KSMHELYE--LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            S+ +  +  L       +   +EL  I+ +V    Y +       + +RG  Y+TG V+
Sbjct: 225 ISVLDKAQQALSDAPAEAQAAIDELTAIANVVAAR-YPNVNFYFDLSELRGYHYHTGTVF 283

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
            A                 ++  GGRYD +   F  ++ PATGF + ++ ++   +
Sbjct: 284 AAYAE----------GYGDAIANGGRYDHIGEAFG-RSRPATGFGLNLTSVMRLAE 328


>gi|121604784|ref|YP_982113.1| class II tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120593753|gb|ABM37192.1| tRNA synthetase, class II (G, H, P and S) [Polaromonas
           naphthalenivorans CJ2]
          Length = 389

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 129/397 (32%), Gaps = 54/397 (13%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD    E R    +     +   +YG++ +  PLLE+ +SL     +       
Sbjct: 9   QLPDQIADVLPSEARHIEELRRLFLDTARSYGYELVMPPLLEHLESLLTGTGEALDL--Q 66

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            F L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ 
Sbjct: 67  TFKLVDQLSGRTLGLRADTTPQVARIDA-HLLNRSGVARLCYCGPVLHTRADRPHATREP 125

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +   AD E   +  D L+A G+   D  + + + +I+  +L    L    
Sbjct: 126 LQFGAEIYGHAGLEADLEAQRLALDCLKAAGVT--DLMVDMADVRIVASLLAGASLGAST 183

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
             +                     L   +     S   +    ++S   + M++ L +  
Sbjct: 184 LAHIHAA-----------------LAAKDASELGSLLASLSGGISSAAREGMMALLQLYG 226

Query: 249 EK-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           ++  + E  + +       +    L  +      S     ++      +RG  YY+G  +
Sbjct: 227 DEQVLLEAEKALPRLPGVHEALQNLKWL-----ASHAPDVKVSFDLADLRGYAYYSGARF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                   +    +    G+V G  R             PA GFS+ +  L+  L     
Sbjct: 282 AIYGQGAELARGGRYDEVGAVFGRNR-------------PAAGFSLDLKELVSVL----- 323

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                       I     D   L+        LR  G
Sbjct: 324 ----PPRPLKAAICAPWGDDAMLNAAIA---RLRANG 353


>gi|120555676|ref|YP_960027.1| tRNA synthetase, class II (G, H, P and S) [Marinobacter aquaeolei
           VT8]
 gi|166219833|sp|A1U4C1|HISZ_MARAV RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|120325525|gb|ABM19840.1| tRNA synthetase, class II (G, H, P and S) [Marinobacter aquaeolei
           VT8]
          Length = 393

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 113/326 (34%), Gaps = 27/326 (8%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D           +   + +  + +G+  +  PL+EY +SL      +       
Sbjct: 9   LPDGVEDILPPLAGRIESLRRDVMDTCQRWGYQLVIPPLIEYLESLFTGTGHDLEL--QT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T   AR  A +        R    G V           R  I
Sbjct: 67  FKLTDQLTGRMMGVRADMTPQAARIDA-HTLGQDGITRLCYAGHVLHTRPRHMLTGRTPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  GS +E AD E+  +M +TL   G+     H+ + +  I + ++   G   D +
Sbjct: 126 QAGCELFGSGSEAADMEVISLMLETLRVAGL--PRLHLDLAHVSIYESLVSDAGFDRDTE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D + +  +  +  LLGE            A     Q+  +         
Sbjct: 184 A-------AVFDAMARKSVPELDRLLGECVP-------GSAGFRLRQLARV-----SGGV 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +S+ +  E++ G         + +     +    +    +      +RG  Y+TG V+ A
Sbjct: 225 ESLADAREILSGASGAIDAALDQLARVADMLNRDFPEVSLGFDFCELRGYNYHTGLVFAA 284

Query: 310 ILG--FPVMNEKQKPVVFGSVGGGGR 333
            +      + +  +    GS  G  R
Sbjct: 285 YVPGHGDAVAKGGRYDAIGSDFGRAR 310


>gi|299530495|ref|ZP_07043915.1| tRNA synthetase, class II (G, H, P and S) [Comamonas testosteroni
           S44]
 gi|298721471|gb|EFI62408.1| tRNA synthetase, class II (G, H, P and S) [Comamonas testosteroni
           S44]
          Length = 382

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 71/357 (19%), Positives = 131/357 (36%), Gaps = 44/357 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +   +YG++ +  P+LEY +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLLDTARSYGYELVMPPMLEYLESLLTGTGEALAL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + LR D+T  +AR  A +        R    GPV       P   R+  
Sbjct: 64  SKLIDQLSGRTMGLRADMTQQVARIDA-HLLNRKGVTRLCYCGPVVHARPDRPRATREPF 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     AD E   +  D L+  G+K  D  + + + +I+  +L  + +     
Sbjct: 123 QFGAEIYGHEGLEADLEALHLALDCLKGAGVK--DVIVDLADVRIVRSLLAGVMVDEQV- 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                             L+GV   L           T+         + +++ L +   
Sbjct: 180 ------------------LRGVHAALASKDATELAQLTRDFP--EASREGLMALLQLYGG 219

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  +L++ T       + L  + + +        ++      +RG  YY+G  + 
Sbjct: 220 MEVLDQAEKLLERTAGVRNVLSHLRWLVQHLD-----GVKVSFDLADLRGYSYYSGTRFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
             +          P    ++  GGRYD + + F  +N PA GFS+ I +L+  +   
Sbjct: 275 IYV----------PGGSDALVRGGRYDEVGAVFG-RNRPAAGFSLDIKQLVAVVPER 320


>gi|77456755|ref|YP_346260.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           fluorescens Pf0-1]
 gi|109892442|sp|Q3KIY5|HISZ_PSEPF RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|77380758|gb|ABA72271.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Pseudomonas fluorescens Pf0-1]
          Length = 395

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 72/400 (18%), Positives = 143/400 (35%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGQDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLRREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+ +  GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLAQAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V               T    L ++   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEV--------------ITLTEGLPADLSGMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    E +    A       +L+ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLSAARERLANAPAPVLAALEDLLAIAERLS-VRFPELPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGR 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      +     + +        LR+ G R 
Sbjct: 327 AEIELPSGG------IWMPDSTDAALWQQVCQLRSEGQRV 360


>gi|167836408|ref|ZP_02463291.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           thailandensis MSMB43]
          Length = 382

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 83/395 (21%), Positives = 138/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL     +E R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGNELRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    GPV      G    R+ +
Sbjct: 64  FKLVDQVSGRTLGLRADMTPQVARIDA-HLLNRQGVTRLCYAGPVLHTRPRGLHASREQL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+K+    + + +  +L  +           
Sbjct: 123 QIGAEIYGHAGLEADQEIQQLMLDALHLTGLKK--IRLDLCHAGVLAALF---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D +     + +   L         + T      +      +  L  D  
Sbjct: 171 ---------ARDAVAAERGEALYDALAGKDVPRLTELTDDLGADTRAALRALPRLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  +   V+        + I    +RG  Y++G ++ A
Sbjct: 222 -VLDEARRQLPALPEIARALDDLAHLVAQVK-----DAEVAIDLADLRGYAYHSGAMFAA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  +V  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YV----------DGVPNAVAHGGRYDHVGQAYG-RARPATGFS---------LDLREIAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPVEARGSAILAPWKQDDALRAA---VGALRDAG 347


>gi|154487054|ref|ZP_02028461.1| hypothetical protein BIFADO_00892 [Bifidobacterium adolescentis
           L2-32]
 gi|154084917|gb|EDN83962.1| hypothetical protein BIFADO_00892 [Bifidobacterium adolescentis
           L2-32]
          Length = 310

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 83/319 (26%), Positives = 126/319 (39%), Gaps = 25/319 (7%)

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR-TD 221
               +  NNRK+ +G    +GL   +       VLR IDKLDK G   V  LL EG   D
Sbjct: 14  PKATVHANNRKLSEGFYRGLGLTDIE------GVLREIDKLDKIGADEVAKLLVEGCGAD 67

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
            +              D        D   + H++       +   +G + L +I +    
Sbjct: 68  EAQARACLELAELTAADGKELSDKFDALCAKHDIASDSDAYVLARQGLDTLAMIVD--EA 125

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
           +      +     I RGL+YYTG VYE  L              GS+  GGRYD L S+ 
Sbjct: 126 ARIRPGSVIADLKIARGLDYYTGSVYETFLDGAA--------ALGSICSGGRYDNLASQ- 176

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
             +  P  G SIG+SRL+  +     +  N      VL+   +      S   +    LR
Sbjct: 177 GNKKYPGVGLSIGLSRLVSYMLHTAGAHANRVSPASVLVAVWNEAD--RSASNLIANQLR 234

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           + GI A++   ++K  G Q+KYAD+   P               ++K++  G +      
Sbjct: 235 SRGIAADVAPTAAK-LGKQIKYADKLGIPYVWFPADASEEGAQDEVKNIITGDQ---RPA 290

Query: 462 NNESWREARV-AQITIPIS 479
           + +SW    V AQ T+ + 
Sbjct: 291 DAQSWEPDTVYAQQTVTVE 309


>gi|116310742|emb|CAH67537.1| H0425E08.5 [Oryza sativa Indica Group]
          Length = 1248

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 63/453 (13%), Positives = 144/453 (31%), Gaps = 24/453 (5%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
              + + I++  + +++ +          + S          +   K V  +    G+ + 
Sbjct: 801  SELLDSIIEVSKEVFKRHCAKR-----FQISPLHTLEGKFTENRGKTV-KILTQGGEMLE 854

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L Y+L  P    VA N                      G     +F+Q D D +G ++  
Sbjct: 855  LCYELRTPFVMSVAANQILSFK----RYEVSWVHRRAVGHSIPYRFLQGDFDIIGGASPI 910

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
             +AE+  +  D        +    I +N+ K+ + +    G+  + + N           
Sbjct: 911  PEAEIVKVTLDVGAHFYDPKA-IIIRLNHSKLAEAVCSWAGVPQERRQNVAEFFSS---- 965

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM---VSFLSIDLEKSMHELYELV 259
                     K       +   G   +   L+ E ++ +           ++ +  L   +
Sbjct: 966  -TLVQYWPNKADRKSQWSLIRGQLLQDLRLSEEVVEKLHKADQRFCGSADQVLARLRGTL 1024

Query: 260  KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL--GFPVMN 317
                +  K  +E+    + +R        I I   +     YYT   ++  +  G P  +
Sbjct: 1025 FYDKSACKALDEISAFLKCLRIWSI-EEHITIDVLMPPSECYYTDLFFQIYVKEGNPGSS 1083

Query: 318  EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
              +K +  G              +K +   A G SI + + +    S +     I+    
Sbjct: 1084 SHEKLLAIGGRYDWLIEQAWDRTYKSKPPGAVGVSIALEKFLPNSPSSDIGFPRIEPSIS 1143

Query: 378  VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
            VL+ +       L++       L  A I+A+       +   Q +YA   +    +    
Sbjct: 1144 VLVCSKGGGG-LLNERMELVAELWEANIKAQFVPQEDPSLQEQYEYASDHDIKCLVFITE 1202

Query: 438  GERSR-GMLQIKDLAKGKELSREIKNNESWREA 469
               S+  +++++ L   +E   + +    +   
Sbjct: 1203 AGVSQTELVKVRHLDAKREKEVKREELVKFLSD 1235


>gi|152996640|ref|YP_001341475.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1]
 gi|189028230|sp|A6VYL1|HISZ_MARMS RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|150837564|gb|ABR71540.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1]
          Length = 392

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 76/398 (19%), Positives = 141/398 (35%), Gaps = 45/398 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +   ++      +  ++ N++E++G+  +  PLLEY DSL      +       
Sbjct: 9   LPEGVDEALPEQAAKIEHLRRTLLNLHESWGYHLVIPPLLEYLDSLLTGAGSDLEI--ET 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D T+ +AR  A +        R    G V R    G    R  I
Sbjct: 67  FKVIDQLSGRLLGIRADFTSQVARIDA-HCLKDDGVQRLSYCGSVLRTMPAGLDGTRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     +D E+  +M  TL   G+   +  + + +  I+ G+L    L+ D +
Sbjct: 126 QLGAEIYGHGGVESDVEVLSLMLQTLSTAGLS--NLVLDLGHVDIVSGVLAACNLNADQE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                         D   L      LG   TD    +  G                   +
Sbjct: 184 SKLIE----LYKAKDLPELDRYAEELG-CLTDIQKQWLVGLPRL------------CGGK 226

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +    +L+       +    L+          +    +    + +    Y+TG ++ A
Sbjct: 227 EVLKHATDLLGDVNESIRDAIVLLQKVSDSICQRFPKVGLHFDLSDLVSYSYHTGVIFAA 286

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +          P    ++  GGRY+ +   F  ++ PATGFS  +       K+L + T
Sbjct: 287 YV----------PGHGNAIARGGRYNNIGQVFG-RSRPATGFSTDV-------KALVALT 328

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           + +      +++ +    +   K       LR  G R 
Sbjct: 329 DIVVNKPKTVLSPICSSDELWQK----ANSLRAEGYRV 362


>gi|295099713|emb|CBK88802.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
           [Eubacterium cylindroides T2-87]
          Length = 236

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 11/245 (4%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +  LP G  D    E + +  + D    ++E+YG+  I TP +E+  +        +  +
Sbjct: 3   KIYLPSGMRDNILSEAKTKKELQDCFEKVFESYGYSKIYTPSIEFFSTYQNAF--SNLNS 60

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             ++   D DG  + LR D+T P+AR  A  F     P R Y    VF+  +   G+  +
Sbjct: 61  NSMYKFFDQDGNILGLRMDMTVPIARVCATKFKDYQLPLRFYYSCNVFKVRESFAGKRNE 120

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
              C V+ +G   + +D E+ M   D ++A+ +K      G +      G+ +K     +
Sbjct: 121 VTDCGVELIG-LDKKSDVEVLMCAFDAMKALNVKTYAIECGDS------GLFKKACKLLN 173

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +      +   ID+     L+     L      N   F     L +  + I+     + 
Sbjct: 174 MEDETIEKLADLIDRKSMVDLKLFLDTLN--LEPNQKQFMMELPLLNGDVSILSKAKKLC 231

Query: 248 LEKSM 252
            ++S+
Sbjct: 232 FDESL 236


>gi|330501629|ref|YP_004378498.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           mendocina NK-01]
 gi|328915915|gb|AEB56746.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           mendocina NK-01]
          Length = 395

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 83/404 (20%), Positives = 143/404 (35%), Gaps = 46/404 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++ +G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEAARRQVLDLFQRWGYEFVVTPHIEYLESLLTGAGQDLDLR--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVTDPLSGRQMGFRADITPQVARIDA-HTLRREGPSRLCYAGSVLHAQPRALTTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++  +D E+  ++ +TLE       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPASDIEVISLLVETLEL--AAVPDVHMDLGHVGIYRGLARAAGLSGEAE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              Q +   L     D     T         +   ++ L    E
Sbjct: 184 -------------------QQLFDALQRKAMDEIETLTAALPAGLGNMLRSLAELCGGRE 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                   LV+   A     +ELV I++ +    Y    +      +RG  Y+TG V+ A
Sbjct: 225 VLDLAQAVLVEAPDAVHAALDELVAIADALELR-YPELPLYFDLGELRGYNYHTGVVFAA 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA-LKSLESS 368
            +          P   G++  GGRYD   + F  +  PATGFS  +  L+      L+ S
Sbjct: 284 FV----------PGEGGAIAQGGRYDDTGAVFG-RARPATGFSTDLKTLVTLGDMRLDES 332

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQML--------RTAG 404
            + +       +           + +   Q L        R AG
Sbjct: 333 VSGVWAPDNHDLYLWQAVRRLRGEGERVVQALPGQSEADAREAG 376


>gi|332704074|ref|ZP_08424162.1| Prolyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554223|gb|EGJ51267.1| Prolyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 576

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 68/537 (12%), Positives = 132/537 (24%), Gaps = 75/537 (13%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R  N++ D +R   +  G   I  P+++ ++ L K     +   K 
Sbjct: 34  QLTSGIYTYLPMGLRALNKVADIVRQEMDRAGAQEILMPMVQPAE-LWKETGRWEFYGKE 92

Query: 70  VFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +   +D       L         +L     R   +    +      +R     R      
Sbjct: 93  LLRFKDRKDSDYCLGPTHEEVVTNLVRGEVRSYRQLPLNLYQIQTKFRDEIRPRFGLMRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI-LEK 181
             F        D     A  +   M    A     +G+K                     
Sbjct: 153 REFVMKDAYSFDRDEEGANKSYWSMYQAYAQIFRRLGLKFKAVEADSGAIGGSFSHEFMV 212

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +   G+D +        A +      +  V L   +  +  +   T GA+   +   ++ 
Sbjct: 213 LAATGEDTIATCQECEWAANLEKAAVICKV-LPCTDNCSPFTVVDTPGAHTVEDVAKLLG 271

Query: 242 ---------SFLSIDLEKSMHELYELVKGTIAGEKGFNE-----LVVISELVRKSGYNSN 287
                        +D +     +    +      K         L    ++   +G    
Sbjct: 272 VTTRKVIKTLLFDVDGQPVAALVRGDHELNEIKLKNHLHATDVRLASPEQVREWTGAPVG 331

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP-VVFGSVGGGGRYDGLVSRFKGQNV 346
                   VR L     C     +      +K    V          Y  L +       
Sbjct: 332 FAGPVDLKVRILADQDLCGDTGYVAGANQADKHLLNVSLSRDVEVEAYADLRTITHEDVC 391

Query: 347 PATGFSIGISRLIVA------------------LKSLESSTNNIKEMGPVLI-------- 380
           P  G  + ++R I                    L         +     + +        
Sbjct: 392 PRCGKGVSLTRGIEVGHVFKLGYKYSKAMHATFLDENGKDQTMVMGCYGIGVSRIIASAI 451

Query: 381 --------TTMDHDSDSLSKYQ---------------MYTQMLRTAGIRAEMFLGSSKNF 417
                                                   + LR  GI         +  
Sbjct: 452 EQNHDDGGIIFPPSIAPYEAALISLGKSGDAVNAKAAELYESLRAEGIEVLFDDREER-P 510

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           G + K AD    P+ I+ G     RG+++ KD   G++    +++     +A   +I
Sbjct: 511 GVKFKDADLVGYPMQIVLGGKGLERGVVEAKDRRTGEKAELPLEDFTKAFKAWRDEI 567


>gi|229588079|ref|YP_002870198.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           fluorescens SBW25]
 gi|259709915|sp|C3KDW7|HISZ_PSEFS RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|229359945|emb|CAY46799.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Pseudomonas fluorescens SBW25]
          Length = 395

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 144/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGQDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLRREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L                 + ++   ++ + +++   
Sbjct: 184 QQ-------LFDALQRKAIDEVIALTE--------------GVPADLAGMLRALVNLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    E +    A      ++++ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 REVLVAARERLANAPAPVLAALDDVLAIAEQLSAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  ++  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQAIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGR 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      +     + +        LR+ G R 
Sbjct: 327 AEVELPSGG------IWMPDSTDAALWQQVCQLRSEGQRV 360


>gi|301754924|ref|XP_002913312.1| PREDICTED: eukaryotic translation initiation factor 2-alpha kinase
            4-like [Ailuropoda melanoleuca]
          Length = 1629

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 91/498 (18%), Positives = 187/498 (37%), Gaps = 68/498 (13%)

Query: 12   PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            P+GF     +  +I+  + D+I  I++ +G   + TPLL                N+ ++
Sbjct: 1033 PKGF---SIRTSKIQQHVCDTIVRIFKRHGAVQLCTPLL-------------LPQNRQIY 1076

Query: 72   S------LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
                     D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      
Sbjct: 1077 EHNEAALFMDHSGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHP 1133

Query: 126  RQFIQCDVDNVGSSAETADAE---MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            ++ ++C  D V S+  ++      +  +     E   ++  +Y I +N+  +L  IL   
Sbjct: 1134 KELLECAFDIVTSTTNSSLPTAEVIYTICEIIQEFPALQERNYSIYLNHTMLLKAILLHC 1193

Query: 183  GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            G+  +DKL++  ++L                +  +             +L+S  +  +  
Sbjct: 1194 GIP-EDKLSQVCVILYD-------------AVTEKLTRREVEAKFYNLSLSSNSLCRLYK 1239

Query: 243  FLSIDLEKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE- 300
            F+    +  + +L   +   I  + G  +LV    + + +      ++ I   ++  L  
Sbjct: 1240 FIEQKGD--LQDLTPAINSLIKQKTGVAQLVKYGLKDLEEIVGLLKKLGIKLQVLINLGL 1297

Query: 301  -YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRL 358
             Y        I  F  +  +++  V   +  GGRYD L+ +F+G         ++G+S  
Sbjct: 1298 VYKVQQHNGVIFQFVAVIRRRQRAVSEILAAGGRYDLLIPQFRGPQALGPIPTAVGVSIA 1357

Query: 359  IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            I  + +   +      +    +  +     S+S+    TQ L +AGI A++    S++  
Sbjct: 1358 IDKISAAILNMEEPVTISSCDLLIVSVGQMSMSRAINLTQKLWSAGITAQIMYDWSQSQE 1417

Query: 419  NQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREARVAQITIP 477
               +Y          +        G  +++K                S+ + R  +  + 
Sbjct: 1418 ELQEYCRHHEITYVALVSD---KGGSYVKVK----------------SFEKERQTEKHVQ 1458

Query: 478  ISELVSTVKKILQENKEE 495
             S+L+  V + L+    +
Sbjct: 1459 ESDLIDHVLQKLRTKVSD 1476


>gi|312958656|ref|ZP_07773176.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           fluorescens WH6]
 gi|311287199|gb|EFQ65760.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           fluorescens WH6]
          Length = 395

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 144/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGQDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLRREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L                 + ++   ++ + +++   
Sbjct: 184 QQ-------LFDALQRKAIDEVIALTE--------------GVPADLAGMLRALVNLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + +    E +    A      ++++ I+E +    +    +      +RG  Y+TG V+
Sbjct: 223 PEVLVAARERLANAPAPVLAALDDVLAIAERLSAR-FPQLPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P V  ++  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGVGQAIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGR 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      +     + +        LR+ G R 
Sbjct: 327 AEVELPSGG------IWMPDSTDAALWQQVCQLRSEGQRV 360


>gi|170723839|ref|YP_001751527.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           putida W619]
 gi|229464980|sp|B1JAD0|HISZ_PSEPW RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|169761842|gb|ACA75158.1| tRNA synthetase class II (G H P and S) [Pseudomonas putida W619]
          Length = 395

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 146/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +   ++  
Sbjct: 9   LPDGIEEVLPPEAARIEIARRQVLDLFQSWGYELVVTPHIEYLESLLTGAGQD--LDQRT 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVVDPQSGRLMGFRADFTPQVARIDA-HTLRREGPSRLCYAGSVLHAQPRALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ T+D E+  +M  TL+       D H+ + +  I  G+    GL G  +
Sbjct: 126 QLGAELYGDASPTSDVEVISLMLATLQL--TDVADVHMDLGHVGIYRGLARAAGLSGAVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L +  +  V+ L               A+L  +  +++ + + +   
Sbjct: 184 QQ-------LFDALQRKSVDEVQAL--------------TADLPKDLGNMLRALVELCGG 222

Query: 250 KSM--HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           + +       L +   +     ++L+ I++ +  S Y    +      +RG  Y+TG V+
Sbjct: 223 REVLAEARVRLGRAPASVLAALDDLLAIADRL-ASRYPELPLYFDLGELRGYNYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P    S+  GGRYD + +     +      + G S  +  L +L  
Sbjct: 282 AVFV----------PGEGQSIAQGGRYDDIGA-----DFGRARPATGFSTDLKTLVTLGR 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +   +   G      M    D  +        LR  G R 
Sbjct: 327 AEVVLPAGG----IWMPDSGD--AALWQQVCQLRNEGQRV 360


>gi|78485437|ref|YP_391362.1| ATP phosphoribosyltransferase regulatory subunit [Thiomicrospira
           crunogena XCL-2]
 gi|109892456|sp|Q31GN5|HISZ_THICR RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|78363723|gb|ABB41688.1| ATP phosphoribosyltransferase regulatory subunit [Thiomicrospira
           crunogena XCL-2]
          Length = 389

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 138/392 (35%), Gaps = 45/392 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D   +E +        + + +E  G+D +  P+ E++DSL              
Sbjct: 8   TPEGIEDLLPEEAKKLEFYRRQLLDGFELSGYDLVLPPIAEFTDSLLTGKGRHLAV--DT 65

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
               D   G+ + +R D+T  +AR +A N        R   +G V +   +     R  I
Sbjct: 66  CRFTDQESGKMMGVRADMTPQVAR-IATNRIKQTGIQRLCYVGEVLKTRNNKAKGSRSPI 124

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           +   +  G S   +D E+  +M  +L  +G++  D  + + +  ++D ++          
Sbjct: 125 EIGAELFGHSGVESDIEVIELMVSSLHNIGLQ--DLTLSLGHVSVVDELMNV-------- 174

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI--MVSFLSID 247
                        L     + +  +L         DF     +T  Q     ++  L  D
Sbjct: 175 -----------SGLTPTQKENLVDILLRKAVPEYTDFVAELTVTEAQKQAFELLLSLCGD 223

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           +      +  L   +   ++    L  + +     G++  +I +    +RG +Y+TG ++
Sbjct: 224 IATVTEAMQGLAGLSEPMQRHLAHLQSVVDHFA--GFDGLKIHMDLADLRGYQYHTGMIF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                   M +         +  GGRYDG+ S F           +     +    +L+ 
Sbjct: 282 SCYAAGRKMYQ---------LARGGRYDGIGSEFG-------SAQLATGFSLDLRGALDL 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
            T+  +    ++     +D+D  ++     Q 
Sbjct: 326 LTSPAEAEKEIVYAPNVYDADLQAEIAKLKQQ 357


>gi|167035931|ref|YP_001671162.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           putida GB-1]
 gi|189028234|sp|B0KKZ1|HISZ_PSEPG RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|166862419|gb|ABZ00827.1| tRNA synthetase class II (G H P and S) [Pseudomonas putida GB-1]
          Length = 395

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 147/400 (36%), Gaps = 51/400 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +   ++  
Sbjct: 9   LPDGIEEVLPPEAARIEIARRQVLDLFQSWGYELVVTPHIEYLESLLTGAGQD--LDQRT 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVVDPQSGRLMGFRADFTPQVARIDA-HTLRREGPSRLCYAGSVLHAQPRALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ T+D E+  +M  TL+       D H+ + +  I  G+    GL G  +
Sbjct: 126 QLGAELYGDASPTSDVEVISLMLATLQL--TDVPDVHMDLGHVGIYRGLARAAGLSGAVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L +  +  V+ L               A+L  +  +++ + + +   
Sbjct: 184 QQ-------LFDALQRKAVDEVQAL--------------TADLPKDLGNMLRALVELCGG 222

Query: 250 KSM--HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           + +       L +   +     ++L+ I++ +  S Y    +      +RG  Y+TG V+
Sbjct: 223 REVLADARVRLGRAPASVLAALDDLLAIADRL-ASRYPDLPLYFDLGELRGYNYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P    S+  GGRYD + + F  +  PATGFS  +  L+   ++   
Sbjct: 282 AVFV----------PGEGQSIAQGGRYDDIGADFG-RARPATGFSTDLKTLVTLGRAEVV 330

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                  M       +                LR  G R 
Sbjct: 331 LPTGGIWMPDSGDAALWQQ----------VCQLRNEGQRV 360


>gi|254427542|ref|ZP_05041249.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Alcanivorax sp. DG881]
 gi|196193711|gb|EDX88670.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Alcanivorax sp. DG881]
          Length = 391

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 80/402 (19%), Positives = 144/402 (35%), Gaps = 49/402 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +      R   ++     ++Y+ +G++ +  PL+E+ +SL      +    +  
Sbjct: 10  LPDGVEEVLPGRARAIEQLRRQTLDLYQRWGYELVFPPLIEFMESLLNGGGRD--LERET 67

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +      P R        R      G  R   
Sbjct: 68  FKITDQLTGRLMGVRADITPQVARMDA-HSLRRNAPSRLCYCSSALRTRPVVAGGTRLPY 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+  G S   +D E+  ++ +TL   G+ ++   + + +  +  G+L+   L    +
Sbjct: 127 QLGVELFGHSGTDSDLEVISLLLETLTLSGVDQH-VVLDLGHVGLFRGLLDSCDLSDSQQ 185

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                I +R             K  +       S D    A      +  +         
Sbjct: 186 SQLEDIYVR-------------KARVELDTFIASHDMPAAAGKALAALPWL-----AGGV 227

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E   L+          +EL V+ +++   G    ++ +    +RG  Y+TGCV+ A
Sbjct: 228 DVLTEARALLSPFPGALAALDELAVLVDVLGARG---VQLHLDLGELRGYHYHTGCVFAA 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            L          P     V  GGRYD +   F  +  PATGFS  +  L    +S   + 
Sbjct: 285 YL----------PGESEPVAKGGRYDHIGEVFG-RARPATGFSADLKMLAERAESAALTG 333

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
                        +   S   + +      LR  G R  + L
Sbjct: 334 ------------ILAEGSLQDATFATTVSALREQGERVVLAL 363


>gi|167562561|ref|ZP_02355477.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           oklahomensis EO147]
 gi|167569743|ref|ZP_02362617.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           oklahomensis C6786]
          Length = 382

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 83/395 (21%), Positives = 139/395 (35%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL     +E R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGNELRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    GPV      G    R+ +
Sbjct: 64  FKLVDQVSGRTLGLRADMTPQVARIDA-HLLNRQGVTRLCYAGPVLHTRPRGLHASREQL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+K+    + + +  +L  +           
Sbjct: 123 QVGAEIYGHAGLEADLEIQQLMLDALHLTGLKK--IRLDLCHAGVLAALF---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D +     + +   L         + T      +      +  L  D  
Sbjct: 171 ---------ARDAVAAERGEALYDALAGKDVPRLNELTDDLGTDTRAALRALPRLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++  V+        + I    +RG  Y++G ++ A
Sbjct: 222 -VLDEARRQLPALPEIARALDDLAHLAAQVK-----DAEVAIDLADLRGYAYHSGAMFAA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  +V  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YV----------DGVPNAVAHGGRYDHVGQAYG-RARPATGFS---------LDLREIAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPIEARGAAILAPWKQDDALRAA---VGALRDAG 347


>gi|149377520|ref|ZP_01895261.1| putative ATP phosphoribosyltransferase [Marinobacter algicola
           DG893]
 gi|149358212|gb|EDM46693.1| putative ATP phosphoribosyltransferase [Marinobacter algicola
           DG893]
          Length = 393

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 115/326 (35%), Gaps = 27/326 (8%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D           +   + +  + +G+  +  PL+EY +SL      +       
Sbjct: 9   LPDGVEDILPPLAGQIESLRRDVMDTCQRWGYQLVIPPLIEYLESLFTGTGHDLEL--QT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T   AR  A +        R    G V           R  I
Sbjct: 67  FKLTDQLTGRMMGLRADMTPQAARIDA-HTLGQEGITRLCYAGHVLHTRPRHMLTGRTPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  GS++E+AD E+  +M +TL   G+     H+ + +  I + ++ + G   D  
Sbjct: 126 QAGCELFGSASESADMEVISLMLETLRVSGL--PRIHLDLAHVAIYETLVGEAGFDRD-- 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D + +  +  +  LLG     ++G   +     S              +
Sbjct: 182 -----TGAAIFDAMARKSVPELDELLGGCPPGSAGSMLRELARVS------------GGK 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
            ++ E   +++G     +   + +     +    Y           +RG  Y+TG V+ A
Sbjct: 225 DALREAKRILEGAPEPLRQALDQLDRVADMLAGNYPEVSFGFDFCELRGYNYHTGLVFAA 284

Query: 310 ILG--FPVMNEKQKPVVFGSVGGGGR 333
            +      + +  +    GS  G  R
Sbjct: 285 YVPGHGDAVAKGGRYDAIGSDFGRAR 310


>gi|332594832|emb|CCA41210.1| GCN2-type protein kinase [Triticum aestivum]
          Length = 1247

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 68/456 (14%), Positives = 151/456 (33%), Gaps = 24/456 (5%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
              + + I++  + +++ +     +   L   D  GKF  +          +    G+ + 
Sbjct: 800  SELLDSIIEVSKEVFKRHCAKRFQISPLHTLD--GKFTENSG----QTVKILTQGGEMLE 853

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L Y+   P    VA N  +                   G     +F+Q D D +G S+  
Sbjct: 854  LCYEQRTPFVMNVAANQLSSCK----RYEISWVHRRAVGHSTPYRFLQGDFDIIGGSSPI 909

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
              AE+  +  D +      +    I +N+ K+ + +    G+  + + N    +   + +
Sbjct: 910  TQAEVIKVALDLVRRFYNSKA-IVIRLNHSKLAEAVCSWAGVPQERRQNVAEFLSSTLVQ 968

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM---VSFLSIDLEKSMHELYELV 259
                     K       +   G   +   L+ E ++ +           +  +  L   +
Sbjct: 969  YC-----PNKADRKSQWSLIRGQLLQDLRLSEEVVEKLHKADQRFCGSADLVLARLRGTL 1023

Query: 260  KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL--GFPVMN 317
                +  K  ++L    + +R        I I   +     YYT   ++     G PV++
Sbjct: 1024 FYDKSACKALDDLSTFLKYLRIWSV-EEHIAIDVLMPPSDYYYTDMFFQIYSKEGNPVLS 1082

Query: 318  EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
              +K +  G        +      K +   A G SI + + +    S +     I+    
Sbjct: 1083 SHEKLLAVGGRYDMLMENAWDKTHKTKPPGAVGVSIALEKFLPNNPSSDVGLPRIENSIS 1142

Query: 378  VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
            VL+ +       L++       L  A I+A+       +   Q +YA   +    +    
Sbjct: 1143 VLVCSKGGGG-LLNERMELVAELWEANIKAQFVPQEDPSLQEQYEYASDHDIKCLVFITE 1201

Query: 438  GERSR-GMLQIKDLAKGKELSREIKNNESWREARVA 472
               S+  +++++ L   KE   E +    +    ++
Sbjct: 1202 AGLSQTDLVKVRHLDARKEKDVEKEEIVKFLSEAIS 1237


>gi|300704404|ref|YP_003746007.1| hetero-octameric ATP phosphoribosyl transferase, tRNA
           synthetase-like subunit [Ralstonia solanacearum
           CFBP2957]
 gi|299072068|emb|CBJ43400.1| hetero-octameric ATP phosphoribosyl transferase, tRNA
           synthetase-like subunit [Ralstonia solanacearum
           CFBP2957]
          Length = 386

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 124/369 (33%), Gaps = 44/369 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 6   LPESIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYIESLLSGTGHDLDLK--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ I LR D+T  +AR  A +        R    G V      G    R+ +
Sbjct: 64  FKLVDQLSGRTIGLRADITPQVARIDA-HLLNRAGVTRLCYAGSVLHTRPSGFHVTREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M            D  + + +  +L  +L++  +  D +
Sbjct: 123 QIGAEIYGHAGLEADLEIQDLMLA--ALSAAGLADVRLDLCHVGVLAALLDQAPVAPDVQ 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 +                        D        A L + Q D +    S+   
Sbjct: 181 DALFGALAS---------------------KDVPALQAVTAGLPAAQRDAINLLPSLYGG 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +      +    A  +  ++L  ++E V         + I    +RG  Y++G ++ 
Sbjct: 220 ADVLARARAQLPQLPAIGRALDDLATLAEHV-----GGAAVNIDLADLRGYHYHSGVMFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG-QNVPATGFSIGISRLIVALKSLES 367
           A +            V  +V  GGRYD +   F   +        +     I  +++  +
Sbjct: 275 AYVA----------GVPNAVARGGRYDKIGEAFGRARPATGFSLDLREVAGISPMEARAA 324

Query: 368 STNNIKEMG 376
           + +      
Sbjct: 325 AIHAPWSAD 333


>gi|260221261|emb|CBA29648.1| ATP phosphoribosyltransferase regulatory subunit [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 382

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 127/354 (35%), Gaps = 42/354 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    I   + ++   YG++ +  P+LE+ +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEEIRRDLLDMARCYGYELVMPPMLEHLESLLSGTGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQISGRMMGLRADSTPQVARIDA-HLLNRSGVTRLCYCGPVLHTRPAAPHATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +  D L+A   K     + + + +I+  +L++ GL    K
Sbjct: 123 QFGAEIYGHAGLEADLEVLTLTLDALKA--CKVGALTVDMADARIVGSLLDESGLSSSQK 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                V   L    +    + T+    T       +  L  + +
Sbjct: 181 -------------------NEVLSALTSKDSSALTELTQSCPQTVGAALRSLVNLYGNAD 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +  + +       +  + L  ++  +        ++ I    +RG  YYTG  +  
Sbjct: 222 -VLQQARKELPALPGISQALDHLQWLAGHLE-----GVKVSIDLADLRGYAYYTGMRFSI 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
                            ++  GGRYD + S F  +  PA GFS+ +  L  A +
Sbjct: 276 YAA----------GASDALARGGRYDEVGSVFG-RKRPAVGFSLDVKVLAQAAE 318


>gi|110739016|dbj|BAF01427.1| putative histidyl tRNA synthetase [Arabidopsis thaliana]
          Length = 195

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 26/220 (11%)

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
           +EL ++ E +++S   S RI    ++ RGL+YYTG ++EA+               GS+G
Sbjct: 2   DELSIMFEALKRSKC-SERIVFDLSLARGLDYYTGVIFEAVC---------IGAEVGSIG 51

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
            GGRYD L+  F  + VPA G S+GI R+   ++ L      +       +       + 
Sbjct: 52  AGGRYDNLIGMFGTKQVPAVGMSLGIERVFNIMEELNEKQKQVIRPTETQVLVSIMVDNK 111

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L++       L  A I AE +L S +        A     P  ++ G  E S   + +K 
Sbjct: 112 LAEAAELVSQLWGAKINAE-YLVSKRK-EKHFNRAKESGIPWMVMVGEKELSGSFVTLKK 169

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
           L KG E   +               T      V  +KK+L
Sbjct: 170 LEKGSEEKED--------------QTCTRDRFVEELKKLL 195


>gi|38346225|emb|CAE02047.2| OJ990528_30.5 [Oryza sativa Japonica Group]
          Length = 1248

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 62/453 (13%), Positives = 143/453 (31%), Gaps = 24/453 (5%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
              + + I++  + +++ +          + S          +   K V  +    G+ + 
Sbjct: 801  SELLDSIIEVSKEVFKRHCAKR-----FQISPLHTLEGKFTENRGKTV-KILTQGGEMLE 854

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L Y+L  P    V  N                      G     +F+Q D D +G ++  
Sbjct: 855  LCYELRTPFVMSVVANQILSFK----RYEVSWVHRRAVGHSIPYRFLQGDFDIIGGASPI 910

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
             +AE+  +  D        +    I +N+ K+ + +    G+  + + N           
Sbjct: 911  PEAEIVKVTLDVGAHFYDPKA-IIIRLNHSKLAEAVCSWAGVPQERRQNVAEFFSS---- 965

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM---VSFLSIDLEKSMHELYELV 259
                     K       +   G   +   L+ E ++ +           ++ +  L   +
Sbjct: 966  -TLVQYWPNKADRKSQWSLIRGQLLQDLRLSEEVVEKLHKADQRFCGSADQVLARLRGTL 1024

Query: 260  KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL--GFPVMN 317
                +  K  +E+    + +R        I I   +     YYT   ++  +  G P  +
Sbjct: 1025 FYDKSACKALDEISAFLKCLRIWSI-EEHITIDVLMPPSECYYTDLFFQIYVKEGNPGSS 1083

Query: 318  EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
              +K +  G              +K +   A G SI + + +    S +     I+    
Sbjct: 1084 SHEKLLAIGGRYDWLIEQAWDRTYKSKPPGAVGVSIALEKFLPNSPSSDIGFPRIEPSIS 1143

Query: 378  VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
            VL+ +       L++       L  A I+A+       +   Q +YA   +    +    
Sbjct: 1144 VLVCSKGGGG-LLNERMELVAELWEANIKAQFVPQEDPSLQEQYEYASDHDIKCLVFITE 1202

Query: 438  GERSR-GMLQIKDLAKGKELSREIKNNESWREA 469
               S+  +++++ L   +E   + +    +   
Sbjct: 1203 AGVSQTELVKVRHLDAKREKEVKREELVKFLSD 1235


>gi|329906382|ref|ZP_08274390.1| ATP phosphoribosyltransferase regulatory subunit [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547299|gb|EGF32140.1| ATP phosphoribosyltransferase regulatory subunit [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 383

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 85/442 (19%), Positives = 157/442 (35%), Gaps = 67/442 (15%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  P+LEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRQLLDNFRHYGYELVMPPMLEYLESLLTGAGADTDLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T  +AR  A +        R    G V      G    R+ +
Sbjct: 64  FKLVDQLSGRTMGVRSDMTTQVARIDA-HLLNRSSVTRLCYAGSVLHTRPSGLHATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   ADAE+  ++  +L   GI+     + + +  I+  I+          
Sbjct: 123 QIGAEIYGHAGLEADAEIQQLVLASLALAGIR--TVRLDLCHVGIVRAIM---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D   +     +  LL           T      +   D +++   +  +
Sbjct: 171 ---------AQDATARANEAALFALLKAKDAPGLRLLTADFGAIA--RDAILALPDLYGD 219

Query: 250 K-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
             ++     ++          ++L  + +L         +I I    +RG  Y +G  + 
Sbjct: 220 ATTLVRARAVLPALPGIVAALDDLDALVQLAGA-----AQIIIDLADLRGYHYESGATFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P +   V  GGRYD +   F  +  PATGFS+ +  L   L + +  
Sbjct: 275 AYV----------PGLPNPVARGGRYDHVGEAFG-RARPATGFSMDLRELARLLPAAQRV 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
           +                D+   ++      +LR AG      L   +N  +Q    +  +
Sbjct: 324 SAIRAPW--------GTDAALRAE----IAVLRQAGEVVIQNLPGHEN--DQ----EEFD 365

Query: 429 CPLAIIQGTGERSRGMLQIKDL 450
           C  A++        G  Q+K+L
Sbjct: 366 CDRALV-----LDNGNWQLKNL 382


>gi|124514289|gb|EAY55803.1| Histidyl-tRNA lygase [Leptospirillum rubarum]
          Length = 437

 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 140/396 (35%), Gaps = 36/396 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P+G     ++    R      +  ++  +G+  I  P+ EY DSL   L  +       
Sbjct: 22  TPKGVGPVFSRIASFRRETTARLLRLFSLWGYTEITLPVFEYLDSLAPGL--DPVLQHKA 79

Query: 71  FSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++LQD   G  + LR D TA +AR VA+  +      +      VFR+E       R+ +
Sbjct: 80  YTLQDRGSGHVLLLRPDATAQIARLVAQGQENTTEVQKYAYSTTVFRHED-HHILERELL 138

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++  G     AD E+  +  + +  +    +   + +++  +    LE  G +    
Sbjct: 139 QTGIELFGVPNPEADWEILALCREGVRIL--HLDSPLLSLSHTGLQKAFLEYAGQNLSLP 196

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           L   L   R+    D   +  V    G+          K    T    + +         
Sbjct: 197 LQSGLQ--RSFYAHDSIAMTEVLREAGKKDGVLLDVLDKIVGRTHSAQEAI--------- 245

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E + +   +    +  + L  I  LV       N I++   +  G  YY+G V+  
Sbjct: 246 -HILERHPVFSSSPDLTRNASSLSQILHLVDAF---QNEIRVDFALNPGGPYYSGMVFHL 301

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYD ++    G+++PATGF+      +  ++SL    
Sbjct: 302 YA----------RGTNQELASGGRYD-MLPSLFGKSMPATGFAFH----LNRIESLLGYE 346

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
            +      + I  +  D     K       LR  G 
Sbjct: 347 ASETSRTHLDIQLVGKDKQIKDKLIDCAAKLREKGF 382


>gi|306831759|ref|ZP_07464916.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|304426184|gb|EFM29299.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
          Length = 329

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 75/362 (20%), Positives = 137/362 (37%), Gaps = 44/362 (12%)

Query: 1   MGKKTKLR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M    K++   LP G  D   K  R+  +I   I +   + GF+ IETP LE+ +     
Sbjct: 2   MLGVNKMKKTTLPVGMHDKLFKRARVTYKIERDISDFLMSQGFNRIETPTLEHFEVF--- 58

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
               D   K  ++  D  G+ ++LR D+T+ + R +A     +  P +    G VF+  +
Sbjct: 59  ---SDTITKNNYNFFDKSGELLTLRPDITSQIGRVIAS--TQVETPIKFSYSGKVFKYNE 113

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              G   +  Q  V+ VG  A+ A  E      + L+   I    +    ++  IL  I 
Sbjct: 114 EMRGLMNEHTQAGVEIVGFPAKEAVFEAIQSAKEALDRADIPSYQFE--FSHAAILQTIF 171

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E + L    +                   + +   + +       +FTK      ++   
Sbjct: 172 ETLALPQAVE-------------------ETLAQAIKDKNITQLNEFTKKYPSEFDEFLK 212

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            + +L  +  + +    ELVK     +     L  +  L+ +      +  I    +  +
Sbjct: 213 NLPYLFGESHQVLESARELVKN----QAILAALTDLENLLNQVSEILPKSNIDLAQIPTM 268

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            YYTG +++               V  +   GGRYD L  RF+ + + A G+++ I  + 
Sbjct: 269 PYYTGVMFKVF----------GDKVPDAFASGGRYDKLFERFEAKKLTAVGWAVDIDAVY 318

Query: 360 VA 361
            A
Sbjct: 319 QA 320


>gi|74000020|ref|XP_535431.2| PREDICTED: similar to Eukaryotic translation initiation factor
            2-alpha kinase 4 (GCN2-like protein) [Canis familiaris]
          Length = 1633

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 88/498 (17%), Positives = 182/498 (36%), Gaps = 68/498 (13%)

Query: 12   PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            P+GF     +  +I+  + D+I  I++ +G   + TPLL                N+ ++
Sbjct: 1055 PKGF---SIRTSKIQQHVCDTIVRIFKKHGAVQLCTPLL-------------LPQNRQIY 1098

Query: 72   S------LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
                     D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      
Sbjct: 1099 EHNEAALFMDHSGMLVMLPFDLRVPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHP 1155

Query: 126  RQFIQCDVDNVGSSAETADAE---MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            ++ ++C  D V S+  ++      +  +     E   ++  +Y I +N+  +L  I    
Sbjct: 1156 KELLECAFDIVTSTTNSSLPTAEVIYTICEIIQEFPALQERNYSIYLNHTMLLKAIFLHC 1215

Query: 183  GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            G+  D      +I+  A+                +             +L+S  +  +  
Sbjct: 1216 GIPEDKLSQVYVILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYK 1261

Query: 243  FLSIDLEKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLE- 300
            F+    +  + +L   +   I  + G  +LV    + + +      ++ I   ++  L  
Sbjct: 1262 FIEQKGD--LQDLTPAINSLIKQKTGVAQLVKYGLKDLEEIIGLLKKLGIKLQVLINLGL 1319

Query: 301  -YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRL 358
             Y        I  F  +  +++  +   +  GGRYD L+ +F+G         ++G+S  
Sbjct: 1320 VYKVQQHNGVIFQFVAVIRRRQRAISEILAAGGRYDLLIPQFRGPQALGPVPTAVGVSIA 1379

Query: 359  IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            I  + +   +      +    +  +     S+S+    TQ L +AGI A++    S++  
Sbjct: 1380 IDKISAAILNMEEPVTISSCDLLIVSVGQMSMSRAINLTQKLWSAGITAQIMYDWSQSQE 1439

Query: 419  NQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREARVAQITIP 477
               +Y          +        G  +++K                S+ + R  +  + 
Sbjct: 1440 ELQEYCRYHEITYVALVSD---KGGSYVKVK----------------SFEKERQTEKLVQ 1480

Query: 478  ISELVSTVKKILQENKEE 495
             S+L+  V + L+    +
Sbjct: 1481 ESDLIDHVLQKLRTKVSD 1498


>gi|16802612|ref|NP_464097.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes EGD-e]
 gi|47094803|ref|ZP_00232418.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Listeria monocytogenes str. 1/2a F6854]
 gi|224502130|ref|ZP_03670437.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL R2-561]
 gi|254828364|ref|ZP_05233051.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254830446|ref|ZP_05235101.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes 10403S]
 gi|254900198|ref|ZP_05260122.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes J0161]
 gi|254911248|ref|ZP_05261260.1| ATP phosphoribosyltransferase [Listeria monocytogenes J2818]
 gi|254935576|ref|ZP_05267273.1| histidyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|20978479|sp|Q8Y9F9|HISZ_LISMO RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|16409945|emb|CAC98648.1| histidyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47016943|gb|EAL07861.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258600757|gb|EEW14082.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258608156|gb|EEW20764.1| histidyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293589179|gb|EFF97513.1| ATP phosphoribosyltransferase [Listeria monocytogenes J2818]
          Length = 393

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 147/429 (34%), Gaps = 55/429 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E R   +I   + + +E  GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREARAAYKIEQQVNHYFEKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+     +    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVMLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ +G  +  A+ E  ++    L A+  +  ++ I + +  I   +   + L 
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILIGIGVLNAL--EIPNFQIELGHAAIYRRVTNLLNLS 173

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++                     +LL+          F      T +  D +++   
Sbjct: 174 ETAEI-------------------DFRLLIQNKSLTGIKRFVADNPSTLD--DFILALPR 212

Query: 246 IDLEK-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +     ++ +  + +           E+  I E V      +  I +   +V+   YYTG
Sbjct: 213 LFGPATAILKQAKNLTTDKGILTALREMETIVEAVS----YTADISVDLGLVQDFHYYTG 268

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++         N             GGRYD L+ +F   + PA G ++ +  L      
Sbjct: 269 IIFRGYADLAADN----------FLSGGRYDHLLEQFTSASSPAVGLALNLDSLTTLQNR 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  +     +                   + L      +E+    +    N + +A
Sbjct: 319 AGVIKKQVSTSLLIHYDL---------DAIQQAEKLMQETPNSELSFFETPT--NAISFA 367

Query: 425 DRRNCPLAI 433
            + + P  I
Sbjct: 368 KKWHIPAVI 376


>gi|320547130|ref|ZP_08041426.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           equinus ATCC 9812]
 gi|320448256|gb|EFW89003.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           equinus ATCC 9812]
          Length = 322

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 81/361 (22%), Positives = 135/361 (37%), Gaps = 48/361 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T     LP G  D   K  R+  +I   I +   + GF+ IETP LE+ +      
Sbjct: 1   MKKTT-----LPVGMHDKLFKRARVTYKIERDISDFLMSQGFNRIETPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   K  ++  D  G+ ++LR D+T+ + R +A     +  P +    G VF+  + 
Sbjct: 52  --SDSITKNNYNFFDKSGELLTLRPDITSQIGRVIAS--TQVETPIKFSYSGKVFKYNEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  V+ VG  A  A  E  +    +L+   I    +    ++  IL  I E
Sbjct: 108 MRGLMNEHTQAGVEIVGFPANEAVYEAIVSAKASLDKADIPSYQFE--FSHAGILQTIFE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           K+ L             R  D             + +       + TK      ++    
Sbjct: 166 KLNLPE--------TASREFDVA-----------IKDKNITQLNELTKKYPSEFDEFLKQ 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +  K +    +LV    +     ++L  + E V      SN   I    +  + 
Sbjct: 207 LPFLFGESHKVLQAARKLVT-NESVLAALSDLENLLEQVSDILPESN---IDLAQIPSMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++               V  +   GGRYD L  RF  + + A G+++ I  +  
Sbjct: 263 YYTGVMFKVF----------GDKVPDAFASGGRYDKLFERFGAKKLTAVGWAVDIDAIYQ 312

Query: 361 A 361
           A
Sbjct: 313 A 313


>gi|53719157|ref|YP_108143.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei K96243]
 gi|53723527|ref|YP_102995.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei ATCC 23344]
 gi|76810158|ref|YP_333740.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei 1710b]
 gi|121601288|ref|YP_993143.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei SAVP1]
 gi|124384850|ref|YP_001026081.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei NCTC 10229]
 gi|126448613|ref|YP_001080650.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei NCTC 10247]
 gi|167002232|ref|ZP_02268022.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           mallei PRL-20]
 gi|167738277|ref|ZP_02411051.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei 14]
 gi|167815466|ref|ZP_02447146.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei 91]
 gi|167910651|ref|ZP_02497742.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei 112]
 gi|217421817|ref|ZP_03453321.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei 576]
 gi|238562649|ref|ZP_00440118.2| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           mallei GB8 horse 4]
 gi|254177911|ref|ZP_04884566.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei ATCC 10399]
 gi|254189048|ref|ZP_04895559.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254199940|ref|ZP_04906306.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei FMH]
 gi|254206273|ref|ZP_04912625.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei JHU]
 gi|254260229|ref|ZP_04951283.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei 1710a]
 gi|254297438|ref|ZP_04964891.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Burkholderia pseudomallei 406e]
 gi|254358312|ref|ZP_04974585.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei 2002721280]
 gi|81824010|sp|Q62JX4|HISZ_BURMA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|81824772|sp|Q63US3|HISZ_BURPS RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|109892203|sp|Q3JRR3|HISZ_BURP1 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|166219821|sp|A3MK64|HISZ_BURM7 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|166219822|sp|A2S2B2|HISZ_BURM9 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|166219823|sp|A1V4J0|HISZ_BURMS RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|52209571|emb|CAH35524.1| putative ATP phosphoribosyltransferase [Burkholderia pseudomallei
           K96243]
 gi|52426950|gb|AAU47543.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei ATCC 23344]
 gi|76579611|gb|ABA49086.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei 1710b]
 gi|121230098|gb|ABM52616.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei SAVP1]
 gi|124292870|gb|ABN02139.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           mallei NCTC 10229]
 gi|126241483|gb|ABO04576.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           mallei NCTC 10247]
 gi|147749536|gb|EDK56610.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei FMH]
 gi|147753716|gb|EDK60781.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei JHU]
 gi|148027439|gb|EDK85460.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei 2002721280]
 gi|157807123|gb|EDO84293.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Burkholderia pseudomallei 406e]
 gi|157936727|gb|EDO92397.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Burkholderia pseudomallei Pasteur 52237]
 gi|160698950|gb|EDP88920.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           mallei ATCC 10399]
 gi|217395559|gb|EEC35577.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei 576]
 gi|238522254|gb|EEP85700.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           mallei GB8 horse 4]
 gi|243062049|gb|EES44235.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           mallei PRL-20]
 gi|254218918|gb|EET08302.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei 1710a]
          Length = 382

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 139/395 (35%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL     +E R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGNELRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    GPV      G    R+ +
Sbjct: 64  FKLVDQVSGRTLGLRADMTPQVARIDA-HLLNRQGVTRLCYAGPVLHTRPRGLHASREQL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+K+    + + +  +L  +  +     +  
Sbjct: 123 QIGAEIYGHAGLEADQEIQQLMLDALHLTGLKK--IRLDLCHAGVLAALFARDAAAAERG 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              + +   L         + T      +      +  L  D  
Sbjct: 181 -------------------EALYEALAGKDVPRLNELTDDLGADTRAALRALPRLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +   L+       +  ++L  ++  V+        + I    +RG  Y++G ++ A
Sbjct: 222 -VLDDARRLLPALPEIARALDDLAHLAAQVK-----DAEVAIDLADLRGYAYHSGAMFAA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  +V  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YV----------DGVPNAVAHGGRYDHVGQAYG-RARPATGFS---------LDLREIAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPVEARGAAILAPWKQDDALRAA---VGALRDAG 347


>gi|325271231|ref|ZP_08137776.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas sp.
           TJI-51]
 gi|324103634|gb|EGC00936.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas sp.
           TJI-51]
          Length = 395

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 80/414 (19%), Positives = 152/414 (36%), Gaps = 42/414 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++ +G++ + TP +EY +SL      +   ++  
Sbjct: 9   LPDGIEEVLPPEAARIEIARRQVLDLFQGWGYELVVTPHIEYLESLLTGAGQD--LDQRT 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVVDPQSGRLMGFRADFTPQVARIDA-HTLRREGPSRLCYAGSVLHAQPRALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ T+D E+  +M  TL+       D H+ + +  I  G+    GL G  +
Sbjct: 126 QLGAELYGDASPTSDVEVISLMLATLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGAVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L +  +  V+ L               A+L  +  +++ + + +   
Sbjct: 184 QQ-------LFDALQRKSVDEVQAL--------------TADLPKDLGNMLRALVELCGG 222

Query: 250 KSM--HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           + +       L +   +     ++L+ I++ +  S Y    +      +RG  Y+TG V+
Sbjct: 223 REVLNEARVRLGRAPASVLAALDDLLAIADRL-ASRYPELPLYFDLGELRGYHYHTGVVF 281

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P    S+  GGRYD + + F  +  PATGFS  +  L+   ++   
Sbjct: 282 AVFV----------PGEGQSIAQGGRYDDIGADFG-RARPATGFSTDLKTLVTLGRAEVV 330

Query: 368 STNNIKEMGPVLITTMDHDS-DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  M       +        S+ Q   Q L    + A +     +    Q
Sbjct: 331 LPTGGIWMPDSGDAALWQQVCQLRSEGQRVVQALPGQPLSAALEADCDRQLIQQ 384


>gi|241662765|ref|YP_002981125.1| ATP phosphoribosyltransferase regulatory subunit [Ralstonia
           pickettii 12D]
 gi|240864792|gb|ACS62453.1| histidyl-tRNA synthetase 2 [Ralstonia pickettii 12D]
          Length = 387

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 81/396 (20%), Positives = 136/396 (34%), Gaps = 56/396 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 7   LPESIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYIESLLSGTGHDLDLK--T 64

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ I LR D+T  +AR  A +        R    G V      G    R+ +
Sbjct: 65  FKLVDQLSGRTIGLRADITPQVARIDA-HLLNRAGVTRLCYAGSVLHTRPSGFHVTREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M            D  + + +  ++  +LE         
Sbjct: 124 QIGAEIYGHAGLEADLEIQELMLA--ALSAAGLADVRLDLCHVGVVAALLE--------- 172

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +  I  R  D+L                 D        A+L + Q D +    ++   
Sbjct: 173 --QSPIAARIQDELFTAL----------AAKDVPALRAITADLPAAQRDAINLLPALYGG 220

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +    + +    A  +  ++L  ++E           + I    +RG  Y++G ++ 
Sbjct: 221 IDVLELARKQLPALPAIGRALDDLATLAERA-----GGATVNIDLADLRGYHYHSGVMFA 275

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +            V  +V  GGRYD +   F  +  PATGFS         L   E +
Sbjct: 276 AYVA----------GVPNAVARGGRYDKVGEAFG-RARPATGFS---------LDLREVA 315

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             +  E     I         L +       LR AG
Sbjct: 316 GISPVEARAAAIHAPWSGDAKLREAIA---ALRAAG 348


>gi|17545944|ref|NP_519346.1| ATP phosphoribosyltransferase regulatory subunit [Ralstonia
           solanacearum GMI1000]
 gi|23821717|sp|Q8Y020|HISZ_RALSO RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|17428239|emb|CAD14927.1| putative atp phosphoribosyltransferase involved in histidine
           biosynthesis protein [Ralstonia solanacearum GMI1000]
          Length = 386

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 63/329 (19%), Positives = 112/329 (34%), Gaps = 43/329 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 6   LPESIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYIESLLSGTGHDLDLK--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ I LR D+T  +AR  A +        R    G V      G    R+ +
Sbjct: 64  FKLVDQLSGRTIGLRADITPQVARIDA-HLLNRAGVTRLCYAGSVLHTRPSGFHVTREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M            D  + + +  +L  +L +  +  D +
Sbjct: 123 QIGAEIYGHAGLEADLEIQDLMLA--ALSAAGLADVRLDLCHVGVLAALLAQAPVAPDVQ 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +   L           T  A L + Q D +    S+   
Sbjct: 181 -------------------DELFAALASKDAPALHALT--AGLPAAQRDAINLLPSLYGG 219

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +      +    A  +  ++L  ++            + I    +RG  Y++G ++ 
Sbjct: 220 VDVLARARAQLPQLPAIGRALDDLATLAAHA-----GGAAVNIDLADLRGYHYHSGVMFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
           A +            V  +V  GGRYD +
Sbjct: 275 AYVA----------GVPNAVARGGRYDKV 293


>gi|26991568|ref|NP_746993.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           putida KT2440]
 gi|148549968|ref|YP_001270070.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           putida F1]
 gi|46395800|sp|Q88DD7|HISZ_PSEPK RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|166219839|sp|A5W9S6|HISZ_PSEP1 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|24986655|gb|AAN70457.1|AE016687_4 histidyl-tRNA synthetase, putative [Pseudomonas putida KT2440]
 gi|148514026|gb|ABQ80886.1| tRNA synthetase, class II (G, H, P and S) [Pseudomonas putida F1]
 gi|313500869|gb|ADR62235.1| HisZ [Pseudomonas putida BIRD-1]
          Length = 395

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 136/398 (34%), Gaps = 47/398 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +   ++  
Sbjct: 9   LPDGIEEVLPPEAARIEIARRQVLDLFQSWGYELVVTPHIEYLESLLTGAGQD--LDQRT 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVVDPQSGRLMGFRADFTPQVARIDA-HTLRREGPSRLCYAGSVLHAQPRALSTSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ T+D E+  +M  TL+       D H+ + +  I  G+    GL G  +
Sbjct: 126 QLGAELYGDASPTSDVEVISLMLATLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGAVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 + R                      D     T         +   +  L    E
Sbjct: 184 QQLFDAMQR-------------------KAVDEVQALTADLPKDLGSMLRALVELCGGRE 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                   L +   +     ++L+ I++ +  S Y    +      +RG  Y+TG V+  
Sbjct: 225 VLAEARVRLGRAPASVLAALDDLLAIADRL-ASRYPDLPLYFDLGELRGYHYHTGVVFAV 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +          P    S+  GGRYD + + F  +  PATGFS  +  L+   ++     
Sbjct: 284 FV----------PGEGQSIAQGGRYDDIGADFG-RARPATGFSTDLKTLVTLGRAEVVLP 332

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                M       +                LR  G R 
Sbjct: 333 TGGIWMPDSGDAALWQQ----------VCQLRNEGQRV 360


>gi|109892212|sp|Q2W2D0|HISZ_MAGMM RecName: Full=ATP phosphoribosyltransferase regulatory subunit
          Length = 379

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 3/150 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    +      ++ S+ +++  +G+D ++ PL+E+ +SL          +   
Sbjct: 10  LPAGLRDMLPPDAEFEASVVHSLMSMFARHGYDRVKPPLIEFEESLLDGAGGG--TSSQT 67

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D    + + LR D+T  +AR  A    +   P R    G V R +       RQF 
Sbjct: 68  FRVMDPMSQKMMGLRADMTPQVARIAATRLGSQPRPLRLSYAGQVLRVKGTQLRPERQFG 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           Q  ++ +GS    ADAE+ +M A+ L+ +G
Sbjct: 128 QAGIELIGSDDAGADAEVLVMTAEALDDLG 157


>gi|89094661|ref|ZP_01167598.1| ATP phosphoribosyltransferase regulatory subunit [Oceanospirillum
           sp. MED92]
 gi|89081131|gb|EAR60366.1| ATP phosphoribosyltransferase regulatory subunit [Oceanospirillum
           sp. MED92]
          Length = 391

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 79/404 (19%), Positives = 155/404 (38%), Gaps = 49/404 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    + R    +   + ++Y+++G++ +  P+LE+ +SL   +  +   N   
Sbjct: 9   LPEGVQELLPPQARRVELLRRRLLDLYQHWGYEQVMPPVLEHLESLLTGVGRDLDLN--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             + D   G  + +R D+T  +AR  A +        R    G V       P   R  +
Sbjct: 67  VKVTDQISGHTLGVRADITPQVARIDA-HRLRESGATRLCYCGSVVHALPAQPLASRNPL 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G S   +D E+  +M +T+ A G+K+ D  I + +  +  G++E   L   +K
Sbjct: 126 QLGAELFGHSGIESDVEVISLMVETMHAAGVKQ-DLSIDLGHVGVFTGLMEVAQLTVAEK 184

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                   +L         DF     +       + +  +++  
Sbjct: 185 -------------------DRYLDILNRKALPELSDFVASLQVEESVKSSLAALPTLNGG 225

Query: 250 -KSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            + + +  EL     A   +  + L  +++ +       ++     + +RG  Y+TG V+
Sbjct: 226 AEVLVKARELFADAPAQVLEAIDYLEQLAQRIALRFPELDQY-FDLSELRGYNYHTGIVF 284

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 ++  GGRYD +   F  +  PATGFS         LK+L  
Sbjct: 285 AAYTPAFGQ----------AIAKGGRYDEIGRDFG-RARPATGFSAD-------LKTLVE 326

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            ++++ +    ++   + DS  L+K       LR+ G+R    L
Sbjct: 327 LSSDVLQTAQQVLAPAEEDSALLAK----VSQLRSEGVRVIYAL 366


>gi|126453631|ref|YP_001066481.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei 1106a]
 gi|134277609|ref|ZP_01764324.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Burkholderia pseudomallei 305]
 gi|167719279|ref|ZP_02402515.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei DM98]
 gi|167845417|ref|ZP_02470925.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei B7210]
 gi|167893959|ref|ZP_02481361.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei 7894]
 gi|167902409|ref|ZP_02489614.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei NCTC 13177]
 gi|167918680|ref|ZP_02505771.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei BCC215]
 gi|242316573|ref|ZP_04815589.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei 1106b]
 gi|254179562|ref|ZP_04886161.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei 1655]
 gi|254197209|ref|ZP_04903631.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Burkholderia pseudomallei S13]
 gi|166219824|sp|A3NVW0|HISZ_BURP0 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|126227273|gb|ABN90813.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei 1106a]
 gi|134251259|gb|EBA51338.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Burkholderia pseudomallei 305]
 gi|169653950|gb|EDS86643.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Burkholderia pseudomallei S13]
 gi|184210102|gb|EDU07145.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei 1655]
 gi|242139812|gb|EES26214.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei 1106b]
          Length = 382

 Score =   99 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 139/395 (35%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL     +E R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGNELRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    GPV      G    R+ +
Sbjct: 64  FKLVDQVSGRTLGLRADMTPQVARIDA-HLLNRQGVTRLCYAGPVLHTRPRGLHASREQL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+K+    + + +  +L  +  +     +  
Sbjct: 123 QIGAEIYGHAGLEADQEIQQLMLDALHLTGLKK--IRLDLCHAGVLAALFARDAAAAERG 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              + +   L         + T      +      +  L  D  
Sbjct: 181 -------------------EALYEALAGKDVPRLNELTDDLGADTRAALRALPRLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +   L+       +  ++L  ++  V+        + I    +RG  Y++G ++ A
Sbjct: 222 -VLDDARRLLPALPEITRALDDLAHLAAQVK-----DAEVAIDLADLRGYAYHSGAMFAA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  +V  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YV----------DGVPNAVAHGGRYDHVGQAYG-RARPATGFS---------LDLREIAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPVEARGAAILAPWKQDDALRAA---VGALRDAG 347


>gi|56476100|ref|YP_157689.1| ATP phosphoribosyltransferase regulatory subunit [Aromatoleum
           aromaticum EbN1]
 gi|81821193|sp|Q5P7C3|HISZ_AZOSE RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|56312143|emb|CAI06788.1| ATP phosphoribosyltransferase regulatory subunit [Aromatoleum
           aromaticum EbN1]
          Length = 384

 Score =   99 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 70/400 (17%), Positives = 130/400 (32%), Gaps = 56/400 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R  LP    D    E     R+   + + + ++G+  +  PLLEY DSL      + + 
Sbjct: 1   MRWVLPDHIQDALPAEADKIERLRRRLLDAFRSHGYQLVVPPLLEYLDSLTTGAGQDLKL 60

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               F L D   G+ + +R D+T  +AR  A +        R    G V           
Sbjct: 61  R--TFKLVDQLSGRTMGVRADMTPQVARIDA-HLLNRRGVSRLCYCGSVLHTLPSTLTAT 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+ +Q   +  G +   AD E+  ++A+ +                      + E     
Sbjct: 118 REPLQLGAELYGHAGLDADIEIIRLLAEVMR---------------------LAEVPASR 156

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D        VL A   +     + +  LL      +       A +       +++   
Sbjct: 157 IDLGHVGLFRVLAARAGMVPGREEELFDLLQAKDLPDLHALV--AGVAEPVRSALLALPG 214

Query: 246 IDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +    + + +    +       +  ++L  ++  +         +      +RG  Y++G
Sbjct: 215 LYGGAEVLDKARVCLPDDAEIREALDDLSRLAAAL-----GDLPVSFDLADLRGYHYHSG 269

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+ A  G              ++  GGRYD +   F     PATGFS+ +  L V L  
Sbjct: 270 VVFAAYGG----------GSPAALALGGRYDRVGEAFGRG-RPATGFSLDLRELAVRLAD 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           +                      D+  +       LR+ G
Sbjct: 319 VGQPGA----------ILAPAGGDAALEA--LVAQLRSRG 346


>gi|284800849|ref|YP_003412714.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes 08-5578]
 gi|284994035|ref|YP_003415803.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes 08-5923]
 gi|284056411|gb|ADB67352.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes 08-5578]
 gi|284059502|gb|ADB70441.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes 08-5923]
          Length = 393

 Score =   99 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 73/428 (17%), Positives = 145/428 (33%), Gaps = 53/428 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E R   +I   + + +E  GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREARAAYKIEQQVNHYFEKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+     +    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVMLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ +G  +  A+ E  ++    L A+  +  ++ I + +  I   +   + L 
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILIGIGVLNAL--EIPNFQIELGHAAIYRRVTNLLNLS 173

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++                     +LL+          F      T +   +++  L 
Sbjct: 174 ETAEI-------------------DFRLLIQNKSLTGIKRFVADNPSTLDDFILVLPRLF 214

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                 + +   L             L  +  +V    Y ++ I +   +V+   YYTG 
Sbjct: 215 GPATAILKQAKNLTTDKGILTA----LREMETIVEAVSYTAD-ISVDLGLVQDFHYYTGI 269

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           ++         N             GGRYD L+ +F   + PA G ++ +  L       
Sbjct: 270 IFRGYADLAADN----------FLSGGRYDHLLEQFTSASSPAVGLALNLDSLTTLQNRA 319

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     +                   + L      +E+    +    N + +A 
Sbjct: 320 GVIKKQVSTSLLIHYDL---------DAIQQAEKLMQETPNSELSFFETPT--NAISFAK 368

Query: 426 RRNCPLAI 433
           + + P  I
Sbjct: 369 KWHIPAVI 376


>gi|148242468|ref|YP_001227625.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           RCC307]
 gi|166219846|sp|A5GTR3|HISZ_SYNR3 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|147850778|emb|CAK28272.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           RCC307]
          Length = 393

 Score =   99 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 66/405 (16%), Positives = 133/405 (32%), Gaps = 41/405 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++ +   I + +  +Y+ +G++ +  P LE  D+L          
Sbjct: 1   MALQPASGARDLLPRDVGVNRWIAEQLAAVYQRWGYEEVTPPSLERIDTLEAGGA---IQ 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK--HGPGR 124
           +  V  +     + + LR ++TA +AR        +  P R +  G  F+ ++      R
Sbjct: 58  SHQVVQVV--ADEALGLRPEMTASIARAACTRLAAMQRPLRLHYRGSTFQAQRAEDQGLR 115

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             + +Q  V+ +G+     DAE+  ++ D    + +        +   + L  +L +   
Sbjct: 116 IVEDLQSGVELMGAKGLAGDAELLRLLLDAGSHLPLSAEHQPTLLIGHQRLLSVLLEAVE 175

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                       LR+  +    GL  V L   E          +   L  E   ++    
Sbjct: 176 P----------SLRSTVRRHVCGLNRVALSQLELPGQQRLQLLQLLQLRGEPAAVLNGLE 225

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           ++     +    + +   I  +     + +  +                           
Sbjct: 226 ALLGATDLLAELKQLISIIEEQASRAGIRLQLDPTF-----------------------H 262

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +E   G  V    Q      ++  GGRYD LV RF      A+G     +   V  + 
Sbjct: 263 PDFELYDGVMVKLVCQGLDAPVAIASGGRYDALVQRFSPVGAVASGVGFSFAVEAVR-QL 321

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           LE +      +   L+      S  L       + L  +G  AE+
Sbjct: 322 LEQADQLPPRLDGQLVLVAYSQSSQLHPALNLLEQLHQSGQPAEL 366


>gi|16799653|ref|NP_469921.1| ATP phosphoribosyltransferase regulatory subunit [Listeria innocua
           Clip11262]
 gi|20978491|sp|Q92E82|HISZ_LISIN RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|16413018|emb|CAC95810.1| histidyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 392

 Score =   99 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 145/429 (33%), Gaps = 55/429 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E R   +I   + + +   GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREARASYQIEQQVNHYFAKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+    T+    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVTLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ +G  +  A+ E  +     L A+  +  ++ I + +  I   ++  + L 
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILSGIGVLNAL--EIPNFQIELGHAAIYRRVIHLLNLP 173

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++                     +LL+          F      T +  D +++   
Sbjct: 174 ETAEM-------------------DFRLLIQNKSLTGIQQFVTENPSTLD--DFILALPR 212

Query: 246 IDLEK-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +     ++ +  + +           E+  I + V      +  I +   +V+   YYTG
Sbjct: 213 LFGPATTILKQAKNLTTDKGILTALTEMETIVDAVS----YAADISVDLGLVQDFHYYTG 268

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++         N             GGRYD L+ +F   + PA G ++ +  L      
Sbjct: 269 IIFRGYADLAADN----------FLSGGRYDHLLEQFTSSSSPAVGLALNLDSLTTLQNR 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        +                   + L      +E+    +    N + +A
Sbjct: 319 AGIIKKQTPTTLLIHYDL---------DAIQQAEKLMQETPNSELSFFETPI--NAISFA 367

Query: 425 DRRNCPLAI 433
            +   P  +
Sbjct: 368 KKWQIPTVV 376


>gi|288905665|ref|YP_003430887.1| histidyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325978695|ref|YP_004288411.1| histidyl-tRNA synthetase, class IIa [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288732391|emb|CBI13963.1| Histidyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325178623|emb|CBZ48667.1| histidyl-tRNA synthetase, class IIa [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 322

 Score =   99 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 76/361 (21%), Positives = 135/361 (37%), Gaps = 48/361 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T     LP G  D   K  R+  +I   I +   + GF+ IETP LE+ +      
Sbjct: 1   MKKTT-----LPVGMHDKLFKRARVTYKIERDISDFLMSQGFNRIETPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   K  ++  D  G+ ++LR D+T+ + R +A     +  P +    G VF+  + 
Sbjct: 52  --SDTITKNNYNFFDKSGELLTLRPDITSQIGRVIAS--TQVETPIKFSYSGKVFKYNEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  V+ VG  A+ A  E      + L+   I    +    ++  IL  I E
Sbjct: 108 MRGLMNEHTQAGVEIVGFPAKEAVFEAIQSAKEALDRADIPSYQFE--FSHAAILQTIFE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L    +                   + +   + +       +FTK      ++    
Sbjct: 166 TLALPQAVE-------------------ETLAQAIKDKNITQLNEFTKKYPSEFDEFLKN 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L  +  + +    ELVK     +     L  +  L+ +      +  I    +  + 
Sbjct: 207 LPYLFGESHQVLESARELVKN----QAILAALTDLENLLNQVSEILPKSNIDLAQIPTMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++               V  +   GGRYD L  RF  + + A G+++ I  +  
Sbjct: 263 YYTGVMFKVF----------GDKVPDAFASGGRYDKLFERFGAKKLTAVGWAVDIDAVYQ 312

Query: 361 A 361
           A
Sbjct: 313 A 313


>gi|313624836|gb|EFR94765.1| ATP phosphoribosyltransferase, regulatory subunit [Listeria innocua
           FSL J1-023]
          Length = 392

 Score =   99 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 70/429 (16%), Positives = 144/429 (33%), Gaps = 55/429 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E R   +I   + + +   GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREARASYQIEQQVNHYFAKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+    T+    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVTLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ +G  +  A+ E  +     L A+  +  ++ I + +  I   ++  + L 
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILSGVGVLNAL--EIPNFQIELGHAAIYRRVIHLLNLP 173

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++                     + L+          F      T +  D +++   
Sbjct: 174 ETTEM-------------------DFRQLIQNKSLTGIQQFVTENPSTLD--DFILALPR 212

Query: 246 IDLEK-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +     ++ +  + +           E+  I + V      +  I +   +V+   YYTG
Sbjct: 213 LFGPATTILKQAKNLTTDKGILTALTEMETIVDAVS----YAADISVDLGLVQDFHYYTG 268

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++         N             GGRYD L+ +F   + PA G ++ +  L      
Sbjct: 269 IIFRGYADLAADN----------FLSGGRYDHLLEQFTSSSSPAVGLALNLDSLTTLQNR 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        +                   + L      +E+    +    N + +A
Sbjct: 319 AGIIKKQTPTTLLIHYDL---------DAIQQAEKLMQETPNSELSFFETPT--NAISFA 367

Query: 425 DRRNCPLAI 433
            +   P  +
Sbjct: 368 KKWQIPTVV 376


>gi|330999641|ref|ZP_08323350.1| putative ATP phosphoribosyltransferase, regulatory subunit
           [Parasutterella excrementihominis YIT 11859]
 gi|329574147|gb|EGG55723.1| putative ATP phosphoribosyltransferase, regulatory subunit
           [Parasutterella excrementihominis YIT 11859]
          Length = 388

 Score =   99 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 75/406 (18%), Positives = 144/406 (35%), Gaps = 55/406 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD   +E R    +  S   +  ++GF+ +  PL+EY DSL      +       
Sbjct: 6   LPENIADMLPREARAIEHLRSSFLKLVTSHGFEVVRPPLVEYVDSLLTGTGGDLDLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +        R   +G V       P   RQ  
Sbjct: 64  FKIVDQVTGKTMGIRADMTPQVARIDA-HILNRSGVSRLCYVGSVLHARPLHPLASRQPY 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
              V+  GSS+  ++ E+  +  ++L   G+   +  + + +  ++  IL+   +     
Sbjct: 123 LAGVEMFGSSSVESEREVICLGIESLRQFGL--ENIFLDLGHTGVVKAILDSDPVSE--- 177

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
              +  +L A+   D+  L+ ++ +L E   D+    T                     E
Sbjct: 178 -VVQDQILFALSHKDRSALEELRGVLKEKTVDDLIRLTMLFG----------------SE 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             ++++ E         +    +  +          ++ +      V G  Y+TG  +  
Sbjct: 221 DVLNQVIEEFSDYPEIPEILESVRRL-----GRESGADIVSCDFADVAGYNYHTGVTFSV 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +          P  +  +  GGRYD +  RF  +  PA GF++ +  +I  + +     
Sbjct: 276 NI----------PGRYQPILRGGRYDDIGERFG-RKRPAVGFTLYLREIIAVMDTKRPYA 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGSS 414
                           D  +L       + LR  G I  E     +
Sbjct: 325 ILAPNR---------LDDAALQSRI---RELRENGDIVIEKLPEDN 358


>gi|315281183|ref|ZP_07869866.1| ATP phosphoribosyltransferase, regulatory subunit [Listeria marthii
           FSL S4-120]
 gi|313615169|gb|EFR88631.1| ATP phosphoribosyltransferase, regulatory subunit [Listeria marthii
           FSL S4-120]
          Length = 393

 Score =   99 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 150/429 (34%), Gaps = 55/429 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E +   +I   + + +E  GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREAQAAYKIEQQVNHYFEKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+    T+    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVTLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ +G  +  A+ E  +     L  +  +  ++ I + +  I   ++  + L 
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILSGIGVLNTL--EIPNFQIELGHAAIYRRVVHLLNLR 173

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++                     +LL+          F      T +  D +++   
Sbjct: 174 ETAEI-------------------DFRLLIQNKSLTGIQQFVADNPSTLD--DFILALPR 212

Query: 246 IDLEK-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +     ++ +  + +           E+  I   V      +  I +   +V+   YYTG
Sbjct: 213 LFGPATAILQQAKNLTTDKGILTALTEMETIVGAVS----YAADISVDLGLVQDFHYYTG 268

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++         N             GGRYD L+ +F     PA G ++ +   +  L++
Sbjct: 269 IIFRGYADLAADN----------FLSGGRYDHLLEQFTSSPSPAVGLALNL-DSLTTLQN 317

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        ++   +D             + L      +E+    +    N + +A
Sbjct: 318 RAGIIKKQPPTTLLIHYDLD--------ALQQAEKLMQETPNSELSFFETPT--NAISFA 367

Query: 425 DRRNCPLAI 433
            + + P  +
Sbjct: 368 KKWHIPTVV 376


>gi|121533721|ref|ZP_01665548.1| prolyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307712|gb|EAX48627.1| prolyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 567

 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 63/512 (12%), Positives = 129/512 (25%), Gaps = 73/512 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   IR   +  G   +  P+++ ++   K     D     +F L
Sbjct: 38  GIYTYLPLAWRVLKKIETIIREEMDAKGGQELLMPIVQPAEI-WKKTGRWDVYGDEMFRL 96

Query: 74  QDDDGQWISLRY---DLTAPL----ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +D   +   L     ++   L     R   +    +      YR     R        F 
Sbjct: 97  KDRHQRDFCLGPTHEEMITTLVRDEVRSYRQLPLLLYQIQNKYRDEIRPRFGLMRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D        +  +M           G+                     +    
Sbjct: 157 MKDLYSFDRDEEGLNESYNKMYDAYTRVFTRCGLTFRPVEADSGAIGGSGSHEFMVLAES 216

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGE---------GRTDNSGDFTKGANLTSEQI 237
            +              ++K  L+ +  +  E               GD T    ++ E+ 
Sbjct: 217 GEAAIVYCTTCDYAANVEKAELKPIHAMEEEQLALEIVETPGRKTIGDVTAFLGISPEKT 276

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN----ELVVISELVRKSGYNSNRIKI-- 291
              +++ +           +     I  +   N    EL   + ++   G     I    
Sbjct: 277 VKTLAYQTEKGLVLALVRGDHEVNEIKLKNELNCLQLELASEAAVIGALGCEPGFIGPVG 336

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT-- 349
              I    +     ++  + G   +++  + V  G          +    +    P    
Sbjct: 337 VKDITIVADATVMNLFNVVCGANKVDKHYRNVNPGRDFTATIVADIRLIQENDPCPRCGA 396

Query: 350 -----------------------------------------GFSIGISRLIVALKSLE-- 366
                                                     + IG++R + A       
Sbjct: 397 PVKTARGIEVGQVFKLYTKYSNALGATYLDENGQERPIVMGCYGIGVTRTMAAAIEQNHD 456

Query: 367 ----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                    I     V+I     +   +S  +     L  AG+ A +   + +  G + K
Sbjct: 457 ENGIIWPVPIAPFHVVVIPVNAKEEAQMSLAEEVYTELNKAGVEAILDDRNER-PGVKFK 515

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            AD    PL +  G    S G +++K    G+
Sbjct: 516 DADLIGYPLRVTIGPKALSEGRVEVKVRRTGE 547


>gi|288940960|ref|YP_003443200.1| histidyl-tRNA synthetase 2 [Allochromatium vinosum DSM 180]
 gi|288896332|gb|ADC62168.1| histidyl-tRNA synthetase 2 [Allochromatium vinosum DSM 180]
          Length = 395

 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/399 (18%), Positives = 143/399 (35%), Gaps = 46/399 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    + RI   +   + ++Y ++G++ +  P ++Y DSL      +       
Sbjct: 8   LPAGIEEVLPPQARIVEGLRRELLDLYASWGYELVIPPFIDYLDSLLTGTGQDLDL--QT 65

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T  +AR  A +      P R   +G V      G    R  +
Sbjct: 66  FKLTDQLTGRLLGVRADMTPQVARMDAHH-LRREAPTRLCYLGTVLHTRPDGFAGTRSPL 124

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   +D E+  ++  TL   G    + ++ + +  I  G+  + GL    +
Sbjct: 125 QLGAEIYGHAGIESDTEILRLVLLTLRTAG--IAETYLDLGHVGIYRGLARQAGLDAAQE 182

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L +  +  ++ L+G+              LT     ++V+   ++  
Sbjct: 183 H-------ALFDALQRKAIPEIESLIGDF------------GLTGAPAGMLVALAELNGS 223

Query: 250 KSMHELYELVKGTI-AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            ++    +++        +  + L  ++E +         I      +RG  Y TG V+ 
Sbjct: 224 DALERAAQVLAAADRPVREALDYLRRLAEELNHW-LPEVSIHYDLAELRGYRYKTGVVFA 282

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P     V  GGRYD +   F  +  PA GFS  +      L      
Sbjct: 283 AFV----------PGWGLEVARGGRYDDIGRVFG-RARPAVGFSADLKG----LLQHGRG 327

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            +        ++    +D           + LR +G   
Sbjct: 328 LDERYRRPGAVLAPWSNDPALRET----VETLRASGRCV 362


>gi|332295541|ref|YP_004437464.1| Histidine--tRNA ligase [Thermodesulfobium narugense DSM 14796]
 gi|332178644|gb|AEE14333.1| Histidine--tRNA ligase [Thermodesulfobium narugense DSM 14796]
          Length = 406

 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 89/421 (21%), Positives = 161/421 (38%), Gaps = 50/421 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  D   +E+  RN I + I++ +E  GF  +  P+LE  D L   L ++    +    
Sbjct: 8   SGSVDMLPEEVLCRNSIEEKIKSFWEKNGFVMVSIPVLENWDKLQVALDEKLI--EKTIR 65

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             D  G    L  DLT  +AR V+    +  FP + + +  VFR         +  ++  
Sbjct: 66  FIDRFGGVSVLSPDLTVSIARMVSARKRSSPFPLKYFYLSDVFRVTSEHSVIRQCGVEII 125

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     AD E+ +++  TL+ +G   N+ ++ I N +IL  +L+ + +    K N 
Sbjct: 126 G---ADKQSLADVELAVLIFMTLKEIGF--NEIYLEIGNFEILKELLD-LDMLKSYKKNL 179

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               L+            +K         N    +   +    +I+++  FL        
Sbjct: 180 LEAFLKKDWVTLNCIANEIKDFKISNFIRNLPKLSGTPDEVFSKINLIPEFLHP------ 233

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                              L  IS  ++ +G       I+ +++  + YYTG +++  + 
Sbjct: 234 ---------------SVKNLEKISNEIKNAGVKH---YINLSLINEISYYTGFIFQVFV- 274

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                    P    S+GGGGRYD L S F   + P++GF I + ++   LK+      N 
Sbjct: 275 ---------PGSPNSIGGGGRYDDLYSLFGF-DCPSSGFGIDLDKIYEILKANYLKPIN- 323

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                + +    +D   L          R  GIR E+ L S + F   L+++  +     
Sbjct: 324 -----IDVLLSFNDDIPLHWVWNLAASYRDQGIRVEIDLKS-RKFDEALEFSKNKKAKRL 377

Query: 433 I 433
           +
Sbjct: 378 V 378


>gi|312796103|ref|YP_004029025.1| histidyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167878|emb|CBW74881.1| Histidyl-tRNA synthetase (EC 6.1.1.21) [Burkholderia rhizoxinica
           HKI 454]
          Length = 382

 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 65/332 (19%), Positives = 112/332 (33%), Gaps = 41/332 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      +       
Sbjct: 6   LPENIADVLPAEARKLEELRRVLLDRFRSYGYEMVMPPLLEYLESLLTGSGSDLALR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G  + LR D+T  ++R  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGHTLGLRADITPQVSRIDA-HLLNRQGVTRLCYAGHVLHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D+L   G+      +         G+L  +    +  
Sbjct: 123 QIGAEIYGYAGLEADVEIQQLMLDSLRLAGLGPVRLDLC------HAGVLAALLDADERA 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 +  A+   D   L  +   L +   D            S               
Sbjct: 177 AGLGPALYAALAGKDVPRLDELTRDLAKPVRDALLALPMLYGDAS--------------- 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +    A  +  +EL  ++  +         + I    +RG  Y++G ++ A
Sbjct: 222 -VIDEARAQLPAWPALTRALDELAFLAAQI-----GDAHVAIDLADLRGYAYHSGVMFCA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            +            V  +V  GGRYD +   +
Sbjct: 276 YV----------DGVPNAVARGGRYDHVGHAY 297


>gi|303257599|ref|ZP_07343611.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderiales
           bacterium 1_1_47]
 gi|302859569|gb|EFL82648.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderiales
           bacterium 1_1_47]
          Length = 388

 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 75/406 (18%), Positives = 144/406 (35%), Gaps = 55/406 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD   +E R    +  S   +  ++GF+ +  PL+EY DSL      +       
Sbjct: 6   LPENIADMLPREARAIEHLRSSFLKLVTSHGFEVVRPPLVEYVDSLLTGTGGDLDLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +        R   +G V       P   RQ  
Sbjct: 64  FKIVDQVTGKTMGIRADMTPQVARIDA-HILNRSGVSRLCYVGSVLHARPLHPLASRQPY 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
              V+  GSS+  ++ E+  +  ++L   G+   +  + + +  ++  IL+   +     
Sbjct: 123 LAGVEMFGSSSVESEREVICLGIESLRQFGL--ENIFLDLGHTGVVKAILDSDPVSE--- 177

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
              +  +L A+   D+  L+ ++ +L E   D+    T                     E
Sbjct: 178 -VVQDQILFALSHKDRSALEELRGVLKEKTVDDLIRLTMLFG----------------SE 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             ++++ E         +    +  +          ++ +      V G  Y+TG  +  
Sbjct: 221 DVLNQVIEEFSDYPEIPEILESVRRL-----GRESGADIVSYDFADVAGYNYHTGVTFSV 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +          P  +  +  GGRYD +  RF  +  PA GF++ +  +I  + +     
Sbjct: 276 NI----------PGRYQPILRGGRYDDIGERFG-RKRPAVGFTLYLREIIAVMDTKRPYA 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGSS 414
                           D  +L       + LR  G I  E     +
Sbjct: 325 ILAPNR---------LDDAALQSRI---RELRENGDIVIEKLPEDN 358


>gi|119502796|ref|ZP_01624881.1| ATP phosphoribosyltransferase regulatory subunit [marine gamma
           proteobacterium HTCC2080]
 gi|119461142|gb|EAW42232.1| ATP phosphoribosyltransferase regulatory subunit [marine gamma
           proteobacterium HTCC2080]
          Length = 396

 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 69/407 (16%), Positives = 139/407 (34%), Gaps = 51/407 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +   +       +  ++ +    +G+  +  PL+E++DSL   L  +       
Sbjct: 9   LPDGIDELLPERAASVEALRRALLDDCARWGYRYVIPPLVEFTDSLLVGLGADLDV--LT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
               D   G+ + +R D+T  +AR  A +        R    G    +        R  I
Sbjct: 67  CKFSDRTSGRMLGVRADITPQVARIDA-HALGEAGVTRLCYTGSTLHSAPQSTSAGRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTL--EAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           Q   +  G +  +AD E+  +M   +       +     + + N  +   +L   G+  D
Sbjct: 126 QLGAELYGCADISADLEVIDLMLALMARADTEERHGPITLDVGNVGVYQAVLRHSGIEDD 185

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                                  +   L      +  +      +  E   ++ + +++ 
Sbjct: 186 AA-------------------NTIFDALQRKSLPDLDEAVIT--IDVETASVLRALVNLH 224

Query: 248 -LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              + + +    +    A     +E+  +   VR   + S  + +    +RG +Y+TG V
Sbjct: 225 GGPEVLDQARACLVNVPAALAALDEVEQVIAFVRSV-HPSVSVYVDLAELRGFQYHTGLV 283

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           + A L            V  +V  GGRYD + + F  ++ PATGF+  +  L+   K   
Sbjct: 284 FAAYLE----------GVGTAVAMGGRYDNVGAVFG-RSRPATGFAFDLKALMATAKPAV 332

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           ++   +                  ++     + LR AG      LG 
Sbjct: 333 ANDKPVSAPDLRD-----------AELLQVVRNLRAAGRSVITALGG 368


>gi|313620280|gb|EFR91720.1| ATP phosphoribosyltransferase, regulatory subunit [Listeria innocua
           FSL S4-378]
          Length = 392

 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 144/429 (33%), Gaps = 55/429 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E R   +I   + + +   GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREARASYQIEQQVNHYFAKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+    T+    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVTLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ +G  +  A+ E  +     L A+  +  ++ I + +  I   ++  + L 
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILSGIGVLNAL--EIPNFQIELGHAAIYRRVIHLLNLP 173

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++                     +LL+          F       S   D +++   
Sbjct: 174 ETAEM-------------------DFRLLIQNKSLTGIQQFVTENP--STLNDFILALPR 212

Query: 246 IDLEK-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +     ++ +  + +           E+  I + V      +  I +   +V+   YYTG
Sbjct: 213 LFGPATTILKQAKNLTTDKGILTALTEMETIVDAVS----YAADISVDLGLVQDFHYYTG 268

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++         N             GGRYD L+ +F   + PA G ++ +  L      
Sbjct: 269 IIFRGYADLAADN----------FLSGGRYDHLLEQFTSSSSPAVGLALNLDSLTTLQNR 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        +                   + L      +E+    +    N + +A
Sbjct: 319 AGIIKKQTPTTLLIHYDL---------DAIQQAEKLMQETPNSELSFFETPT--NAISFA 367

Query: 425 DRRNCPLAI 433
            +   P  +
Sbjct: 368 KKWQIPTVV 376


>gi|311695386|gb|ADP98259.1| tRNA synthetase, class II (G, H, P and S) [marine bacterium HP15]
          Length = 393

 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 114/326 (34%), Gaps = 27/326 (8%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D           +   + +  + +G+  +  PL+EY +SL     ++       
Sbjct: 9   LPDGVEDILPPLAGRIESLRRDVMDTCQRWGYQLVIPPLIEYLESLFTGTGNDLEL--QT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T   AR  A +        R    G V           R  I
Sbjct: 67  FKLTDQLTGRMMGVRADMTPQAARIDA-HTLGQEGITRLCYAGHVLHTRPRHMLTGRTPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  GS +E AD E+  +M +TL   G+     H+ + +  I + ++ +     D +
Sbjct: 126 QAGCELFGSGSEAADMEVISLMLETLRVAGL--PRIHLDLAHVAIYESLIGEADFDRDTE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D + +  +  +  LLG     ++G   +     S               
Sbjct: 184 -------SAIFDAMARKSVPELDQLLGHCPPGSAGARLRELARVS------------GGP 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           ++++E   +++G         + +     +    Y           +RG  Y+TG V+ A
Sbjct: 225 EALNEARRILQGASDSLDAALDQLGRVSDMLGRDYPDISFGFDFCELRGYNYHTGLVFAA 284

Query: 310 ILG--FPVMNEKQKPVVFGSVGGGGR 333
            +      + +  +    GS  G  R
Sbjct: 285 YVPGHGDSVAKGGRYDAIGSDFGRAR 310


>gi|224498648|ref|ZP_03666997.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes Finland 1988]
          Length = 393

 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 147/429 (34%), Gaps = 55/429 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E +   +I   + + +E  GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREAQAAYKIEQQVNHYFEKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+     +    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVMLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ +G  +  A+ E  ++    L A+  +  ++ I + +  I   +   + L 
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILIGIGVLNAL--EIPNFQIELGHAAIYRRVTNLLNLS 173

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++                     +LL+          F      T +  D +++   
Sbjct: 174 ETAEI-------------------DFRLLIQNKSLTGIKRFVADNPSTLD--DFILALPR 212

Query: 246 IDLEK-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +     ++ +  + +           E+  I E V      +  I +   +V+   YYTG
Sbjct: 213 LFGPATAILKQAKNLTTDKGILTALREMETIVEAVS----YTADISVDLGLVQDFHYYTG 268

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++         N             GGRYD L+ +F   + PA G ++ +  L      
Sbjct: 269 IIFRGYADLAADN----------FLSGGRYDHLLEQFTSASSPAVGLALNLDSLTTLQNR 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  +     +                   + L      +E+    +    N + +A
Sbjct: 319 AGVIKKQVSTSLLIHYDL---------DAIQQAEKLMQETPNSELSFFETPT--NAISFA 367

Query: 425 DRRNCPLAI 433
            + + P  I
Sbjct: 368 KKWHIPAVI 376


>gi|23015583|ref|ZP_00055355.1| COG3705: ATP phosphoribosyltransferase involved in histidine
           biosynthesis [Magnetospirillum magnetotacticum MS-1]
          Length = 379

 Score = 99.5 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 3/150 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    +      ++ S+ +++  +G+D ++ PL+E+ +SL          +   
Sbjct: 10  LPAGLRDMLPPDAEFEASVVHSLMSMFARHGYDRVKPPLIEFEESLLDGAGGG--TSSQT 67

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D    + + LR D+T  +AR  A    T   P R    G V R +       RQF 
Sbjct: 68  FRVMDPMSQKMMGLRADMTPQVARIAATRLGTQPRPLRLSYAGQVLRVKGTQLRPERQFG 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           Q  ++ +GS    ADAE+ +M A+ L  +G
Sbjct: 128 QAGIELIGSDEARADAEVLVMTAEALAEMG 157


>gi|294340457|emb|CAZ88838.1| putative Histidine--tRNA ligase [Thiomonas sp. 3As]
          Length = 383

 Score = 99.1 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/307 (18%), Positives = 109/307 (35%), Gaps = 29/307 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            LP  F+D   +E  +   +  +  +    YG+  +  PLLE+ DSL      +      
Sbjct: 5   RLPEYFSDVLPREAAVIEHLRRACLDTARGYGYALVMPPLLEFVDSLLSGTGQDLDL--Q 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            F L D   G+ + LR D+T   AR  A +        R    G   R    G    R+ 
Sbjct: 63  TFKLIDQISGRALGLRADMTPQAARIDA-HLLNQDGVTRVCYCGSAVRTHPEGVHASREI 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +   AD E+  +  D L   G+  +   + + + +I+ G+L  + L   D
Sbjct: 122 LQFGAELYGHAGLEADLEVQQLALDCLRLAGV--DRAALDLADNRIVRGVLSGLLLGSQD 179

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                  +   +D L       ++LL  +              L  +             
Sbjct: 180 -------MEAILDALASKDAGELRLLTRDCTPTQRAAILALPELYGDA------------ 220

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              + E   ++       +  ++L  ++   ++ G    +++I    +RG  Y++G ++ 
Sbjct: 221 -DVLLEARRVLPQHALISQAIDDLSALARHHQQQG---AQVQIDLADMRGYRYHSGVIFS 276

Query: 309 AILGFPV 315
                  
Sbjct: 277 VYAQGYA 283


>gi|217965337|ref|YP_002351015.1| ATP phosphoribosyltransferase, regulatory subunit [Listeria
           monocytogenes HCC23]
 gi|290892769|ref|ZP_06555760.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|254801987|sp|B8DA56|HISZ_LISMH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|217334607|gb|ACK40401.1| ATP phosphoribosyltransferase, regulatory subunit [Listeria
           monocytogenes HCC23]
 gi|290557581|gb|EFD91104.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|307570107|emb|CAR83286.1| hisZ [Listeria monocytogenes L99]
          Length = 392

 Score = 99.1 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 155/429 (36%), Gaps = 55/429 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E +   +I   + + +E  GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREAQAAYKIEQQVNHYFEKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+    T+    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVTLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ +G  +  A+ E  +     L A+  +  ++ I + +  I   +++ + L 
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILSGIGVLNAL--EIPNFQIELGHAAIYRRVIQLLNLS 173

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++                     + L+          F      T +  D +++   
Sbjct: 174 ETAEI-------------------DFRQLIQNKSLTGIKRFVANNPSTLD--DFILAIPR 212

Query: 246 IDLEK-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +     ++    + +          +E+  I E V      +  I +   +V+   YYTG
Sbjct: 213 LFGPATAILSQAKNLTTDKGILTALHEMETIVEAVS----YTADISVDLGLVQDFHYYTG 268

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++         N             GGRYD L+ +F   + PA G ++ +  L      
Sbjct: 269 IIFRGYADLAADN----------FLSGGRYDHLLEQFTSSSSPAVGLALNLDSLTTLQNR 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                             + +D ++L + + + Q        +E+    + +  N + +A
Sbjct: 319 AGIIKKQTPTT-----LLIHYDLEALQQAEKFMQE----TPNSELSFFETAS--NAISFA 367

Query: 425 DRRNCPLAI 433
            + + P  +
Sbjct: 368 KKWHIPEVV 376


>gi|289209101|ref|YP_003461167.1| tRNA synthetase class II (G H P and S) [Thioalkalivibrio sp.
           K90mix]
 gi|288944732|gb|ADC72431.1| tRNA synthetase class II (G H P and S) [Thioalkalivibrio sp.
           K90mix]
          Length = 394

 Score = 99.1 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 66/406 (16%), Positives = 134/406 (33%), Gaps = 46/406 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +      R    +   + + ++ +G+D +  PL EY +SL   +      +   
Sbjct: 9   LPDGLDEALPDAARRLEGLRRRVLDQFDTWGYDLVMPPLAEYLESLL--VGAGHALDLQT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D  +G+ + +R DLT  +AR  A +   +  P R   +G   R         R  +
Sbjct: 67  FKLTDQMNGRLMGVRADLTPQVARIDA-HRLKVEGPNRLCYVGSTLRTRADEWSGSRSPL 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     +D E+  +M  TLE  G+      + + +  I   +  + GL    +
Sbjct: 126 QAGAELFGHDGLDSDLEIIRLMLATLEICGV--YQPSMDLGHVGIYRALAREAGLDNARE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D+L +  +  ++  L     +                  + + + ++ +
Sbjct: 184 E-------AFFDQLQRKSVPEIEETLKAWGAEGMDAAVC---------RRLRALVDLNGD 227

Query: 250 KSMHELYELVKGTIAGE--KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             +             E     + L  ++E +  +  N + + +    +RG  Y+TG V+
Sbjct: 228 AGVIAAAREALAGAPSEVGAALDHLQAVAERLEATQPNVD-LHVDLGELRGYAYHTGLVF 286

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +          P    ++  GGRY+ +            G +   +     L+ L  
Sbjct: 287 AVFV----------PGSGQAIARGGRYNDIGR--------VFGRARAATGFSTDLRELLR 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                  +    +        ++         LR  G R    L  
Sbjct: 329 RAEVAPPVPRRTVRAPASGDVAMEAAIA---DLRARGNRVVRDLEG 371


>gi|329895354|ref|ZP_08270979.1| ATP phosphoribosyltransferase regulatory subunit [gamma
           proteobacterium IMCC3088]
 gi|328922367|gb|EGG29711.1| ATP phosphoribosyltransferase regulatory subunit [gamma
           proteobacterium IMCC3088]
          Length = 388

 Score = 99.1 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 68/404 (16%), Positives = 140/404 (34%), Gaps = 52/404 (12%)

Query: 7   LRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           ++  +LP+   +   ++      +   + ++Y+++G++ +  PL+EYS+SL   L  +  
Sbjct: 1   MKYWQLPQAVEEVLPEQASALEALRRELLDLYKHWGYELVFPPLIEYSESLLTGLGADLD 60

Query: 66  PNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
                F L D   G+ + +R D+T  +AR  A +        R    G            
Sbjct: 61  L--LTFKLTDQLTGRTLGIRADITPQVARIDA-HSYLKRGVSRLCYAGTTLHTRPKSLMA 117

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R  IQ   +  G S+E AD E+  ++ +TL   G+      + I +  +   +     +
Sbjct: 118 SRCPIQVGAELYGDSSEQADIEIIRLLIETLRTSGV--GALTLDIGHVGVYQAVFAAADI 175

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
             DD            D L +     + + L +         T   N+  +         
Sbjct: 176 DQDD--------TDIFDALQRKSAPDLAVALQDKPAQTREWLTALMNMHGDI-------- 219

Query: 245 SIDLEKSMHELYELVKGT-IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                 ++    +    +  A  +  +++  + + +    ++ +        +RGL Y+T
Sbjct: 220 -----DTLDRARQTFGSSVPAVSQAIDQIETVIKALSAVAHDIDWYV-DLAELRGLNYHT 273

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V+ A                 ++  GGRYD +   +          + G +  +  L 
Sbjct: 274 GLVFAAYA----------KGAGQALANGGRYDSVGQIY-----GRARAATGFAVDLKTLL 318

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +      N +    V    MD   +S          LR +G   
Sbjct: 319 AQGRYKANSQGAISVP-AIMDTKLES------LINDLRASGQIV 355


>gi|220917791|ref|YP_002493095.1| histidyl-tRNA synthetase 2 [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254801973|sp|B8JDI0|HISZ_ANAD2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|219955645|gb|ACL66029.1| histidyl-tRNA synthetase 2 [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 349

 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 114/302 (37%), Gaps = 26/302 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L   LP G  D           +   + +++  +G+  +  P LE  D + + L      
Sbjct: 2   LDLSLPSGLRDLLPDHSAHLAELSSKLHDVFSRFGYRRVFLPTLERLDVVERGL--SPAA 59

Query: 67  NKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
              V    +   G+ +++R D+T  +AR  A   D +  P R    GPV R  +   GR 
Sbjct: 60  LADVMKFVEPGSGEVVAIRPDITPQIARLYAARPDALPSPARLCYDGPVLRAREARAGRP 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+  Q  V+ +G+   +ADAE  +++A +LE VG+K     + + + +  + ++E   L 
Sbjct: 120 REVYQAGVELLGAGGASADAEALVLLARSLERVGLKAP--RVEVGHARFAEAVMEAARLP 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +                      + L  + R   +    KG   ++E  + +     
Sbjct: 178 ERLRSAAW------------------EALSRKDRAALAAAAAKGRG-SAEAREAVPQLAG 218

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +  + ++     + +          E      + R+ G     + +     RGL YYTG 
Sbjct: 219 LFGDGALDRARAIARAVPEAAASLAETEAALRIARRRGVREVAVDLG--EARGLGYYTGI 276

Query: 306 VY 307
            +
Sbjct: 277 TF 278


>gi|126440030|ref|YP_001059214.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei 668]
 gi|167823877|ref|ZP_02455348.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           pseudomallei 9]
 gi|226197289|ref|ZP_03792866.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|166219825|sp|A3NA43|HISZ_BURP6 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|126219523|gb|ABN83029.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei 668]
 gi|225930668|gb|EEH26678.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei Pakistan 9]
          Length = 382

 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 80/395 (20%), Positives = 138/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL     +E R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGNELRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    GPV      G    R+ +
Sbjct: 64  FKLVDQVSGRTLGLRADMTPQVARIDA-HLLNRQGVTRLCYAGPVLHTRPRGLHASREQL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+K+    + + +  +L  +  +     +  
Sbjct: 123 QIGAEIYGHAGLEADQEIQQLMLDALHLTGLKK--IRLDLCHAGVLAALFARDAAAAERG 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              + +   L         + T      +      +  L  D  
Sbjct: 181 -------------------EALYEALAGKDVPRLNELTDDLGADTRAALRALPRLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +    +       +  ++L  ++  V+        + I    +RG  Y++G ++ A
Sbjct: 222 -VLDDARRQLPALPEIARALDDLAHLAAQVK-----DAEVAIDLADLRGYAYHSGAMFAA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  +V  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YV----------DGVPNAVAHGGRYDHVGQAYG-RARPATGFS---------LDLREIAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPVEARGAAILAPWKQDDALRAA---VGALRDAG 347


>gi|114327510|ref|YP_744667.1| ATP phosphoribosyltransferase regulatory subunit [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315684|gb|ABI61744.1| ATP phosphoribosyltransferase regulatory subunit [Granulibacter
           bethesdensis CGDNIH1]
          Length = 403

 Score = 98.8 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 89/239 (37%), Gaps = 12/239 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M   T  +A LP G  D    E       + ++  ++  +G+  ++ PL+E+ ++L    
Sbjct: 1   MSDITSNKALLPSGLRDLLPPEAEAEAVCVATLMGVFSAHGYRRVKPPLIEFEETLFAGA 60

Query: 61  PDEDRPNKGVFSLQDDDG-QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
                 +   F L D D  + +++R D+T  +AR           P R    G   R   
Sbjct: 61  GGA--VSDQSFRLMDPDSHRMMAVRPDITPQIARIATTRLAEAARPLRLCYAGECVRVSP 118

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                 RQ  Q  ++ +G    +ADAE+ ++  + L A G+ +  + +       L  ++
Sbjct: 119 GSLSADRQVSQAGIELIGVDTPSADAELILVAREALAAAGLTQVSFDL------TLPSLV 172

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
             +      +      +L A+D+ D      VK            D      L++   D
Sbjct: 173 PVLLGQAGREEGSLKPLLHALDRKDA---AEVKKQADRIVGPAIADILGDLLLSAGPAD 228


>gi|46906814|ref|YP_013203.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|67460893|sp|Q722Y1|HISZ_LISMF RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|46880080|gb|AAT03380.1| putative ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes serotype 4b str. F2365]
          Length = 392

 Score = 98.8 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 153/429 (35%), Gaps = 55/429 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E +   +I   + + +E  GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREAQAAYKIEQQVNHYFEKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+     +    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVMLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ +G  +  A+ E  +     L A+  +  ++ I + +  I   +++ + L 
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILSGIGVLNAL--EIPNFQIELGHAAIYRRVIQLLNLS 173

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++                     + L+          F      T +  D +++   
Sbjct: 174 ETAEI-------------------DFRQLIQNKSLTGIKRFVANNPSTLD--DFILAIPR 212

Query: 246 IDLEK-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +     ++    + +           E+  I E V      +  I +   +V+   YYTG
Sbjct: 213 LFGPATAILNQAKSLTTDKGILTALREMETIVEAVS----YTADISVDLGLVQDFHYYTG 268

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++         N             GGRYD L+ +F   + PA G ++ +  L      
Sbjct: 269 IIFRGYADLAADN----------FLSGGRYDHLLEQFTSSSSPAVGLALNLDSLTTLQNR 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                             + +D ++L + + + Q        +E+    + +  N + +A
Sbjct: 319 AGIIKKQTPTT-----LLIHYDLEALPQAEKFMQE----TPNSELSFFETAS--NAISFA 367

Query: 425 DRRNCPLAI 433
            + + P  +
Sbjct: 368 KKWHIPEVV 376


>gi|47092834|ref|ZP_00230618.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Listeria monocytogenes str. 4b H7858]
 gi|226223198|ref|YP_002757305.1| histidyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254824158|ref|ZP_05229159.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL J1-194]
 gi|254853231|ref|ZP_05242579.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL R2-503]
 gi|254932156|ref|ZP_05265515.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes HPB2262]
 gi|255521947|ref|ZP_05389184.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL J1-175]
 gi|300765366|ref|ZP_07075349.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL N1-017]
 gi|259709914|sp|C1L0J8|HISZ_LISMC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|47018829|gb|EAL09578.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Listeria monocytogenes str. 4b H7858]
 gi|225875660|emb|CAS04363.1| histidyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258606586|gb|EEW19194.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL R2-503]
 gi|293583712|gb|EFF95744.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes HPB2262]
 gi|293593390|gb|EFG01151.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL J1-194]
 gi|300513927|gb|EFK40991.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL N1-017]
 gi|328467397|gb|EGF38473.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes 1816]
 gi|328475857|gb|EGF46593.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes 220]
 gi|332310990|gb|EGJ24085.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes str. Scott A]
          Length = 392

 Score = 98.8 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 153/429 (35%), Gaps = 55/429 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E +   +I   + + +E  GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREAQAAYKIEQQVNHYFEKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+     +    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVMLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  Q  ++ +G  +  A+ E  +     L A+  +  ++ I + +  I   +++ + L 
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILSGIGVLNAL--EIPNFQIELGHAAIYRRVIQLLNLS 173

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              ++                     + L+          F      T +  D +++   
Sbjct: 174 ETAEI-------------------DFRQLIQNKSLTGIKRFVANNPSTLD--DFILAIPR 212

Query: 246 IDLEK-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +     ++    + +           E+  I E V      +  I +   +V+   YYTG
Sbjct: 213 LFGPATAILNQAKSLTTDKGILTALREMETIVEAVS----YTADISVDLGLVQDFHYYTG 268

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++         N             GGRYD L+ +F   + PA G ++ +  L      
Sbjct: 269 IIFRGYADLAADN----------FLSGGRYDHLLEQFTSSSSPAVGLALNLDSLTTLQNR 318

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                             + +D ++L + + + Q        +E+    + +  N + +A
Sbjct: 319 AGIIKKQTPTT-----LLIHYDLEALPQAEKFMQE----TPNSELSFFETAS--NAISFA 367

Query: 425 DRRNCPLAI 433
            + + P  +
Sbjct: 368 KKWHIPEVV 376


>gi|238021399|ref|ZP_04601825.1| hypothetical protein GCWU000324_01299 [Kingella oralis ATCC 51147]
 gi|237868379|gb|EEP69385.1| hypothetical protein GCWU000324_01299 [Kingella oralis ATCC 51147]
          Length = 379

 Score = 98.8 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 83/414 (20%), Positives = 149/414 (35%), Gaps = 56/414 (13%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD   +  R    + + I   +  +GF+ ++ PL+EYS SL   + D    +  
Sbjct: 5   QLPEHIADILPERARQLESVKEQILAQFRTHGFELVQPPLMEYSRSLLTHIDDG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              L D   G  + +R D+T  +AR  A          R    G V   +  G    R+ 
Sbjct: 63  TIRLADQITGWQLGIRADITPQVARIDAHLLMKNQGINRLCYSGSVLHAQPDGLLATREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           IQ   +  G +   AD E+  +M  TL+  G+   +  + + +  +   I     L G+ 
Sbjct: 123 IQTGAELYGCADTAADVEIIDLMMKTLKVGGL--GNIILSLGHLGVFRAIAAAAQL-GEA 179

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +  + L +++  D         V+ L  + + DN              ID + +   +  
Sbjct: 180 QSRQLLALMQDKDG------NAVRRLAQQWQLDNIW------------IDALAALPELYG 221

Query: 249 EKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +  + +    +    A  +  + L  +        +    + I    VR   Y+TG +Y
Sbjct: 222 SRDVLDKARARLPQLTAVSQALDVLAQVCA-----AFPEQAVHIDLAEVRVDNYHTGLLY 276

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 +V  GGRYDGL + F  ++ PATGFS  +      L + + 
Sbjct: 277 AAYTPDY----------HDAVARGGRYDGLGAYFG-RSRPATGFSFDLRLFGAYLAASQR 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG---SSKNFG 418
                       +     D    +  +     LR  G+   +  G   +S +  
Sbjct: 326 PE---------AVRVAQKD---YAAAKNAVDKLRAQGVCVVVDYGLPDNSSSLK 367


>gi|237812538|ref|YP_002896989.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei MSHR346]
 gi|237505995|gb|ACQ98313.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           pseudomallei MSHR346]
          Length = 382

 Score = 98.8 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 80/395 (20%), Positives = 138/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL     +E R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGNELRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    GPV      G    R+ +
Sbjct: 64  FKLVDQVSGRTLGLRADMTPQVARIDA-HLLNRQGVTRLCYAGPVLHTRPRGLHASREQL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+K+    + + +  +L  +  +     +  
Sbjct: 123 QIGAEIYGHAGLEADQEIQQLMLDALHLTGLKK--IRLDLCHAGVLAALFARDAAAAERG 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              + +   L         + T      +      +  L  D  
Sbjct: 181 -------------------EALYEALAGKDVPRLNELTDDLGADTRAALRALPRLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +    +       +  ++L  ++  V+        + I    +RG  Y++G ++ A
Sbjct: 222 -VLDDARRQLPALPEITRALDDLAHLAAQVK-----DAEVAIDLADLRGYAYHSGAMFAA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  +V  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YV----------DGVPNAVAHGGRYDHVGQAYG-RARPATGFS---------LDLREIAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPVEARGAAILAPWKQDDALRAA---VGALRDAG 347


>gi|300691796|ref|YP_003752791.1| hetero-octameric ATP phosphoribosyl transferase, tRNA
           synthetase-like subunit [Ralstonia solanacearum PSI07]
 gi|299078856|emb|CBJ51517.1| hetero-octameric ATP phosphoribosyl transferase, tRNA
           synthetase-like subunit [Ralstonia solanacearum PSI07]
          Length = 386

 Score = 98.8 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 132/396 (33%), Gaps = 56/396 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 6   LPESIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYIESLLSGTGHDLDLK--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ I LR D+T  +AR  A +        R    G V      G    R+ +
Sbjct: 64  FKLVDQLSGRTIGLRADITPQVARIDA-HLLNRAGVTRLCYAGSVLHTRPSGFHVTREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M            D  + + +  +L  +L +  +  D +
Sbjct: 123 QIGAEIYGHAGLEADLEIQDLMLA--ALSAAGLADVRLDLCHVGVLAALLGQAPVAPDVQ 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 +                        D        + L + Q D +    S+   
Sbjct: 181 DELFAALAS---------------------KDVPALHVITSGLPAAQRDAINLLPSLYGG 219

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +      +    A  +  ++L  ++E           + I    +RG  Y++G ++ 
Sbjct: 220 VDVLARARAQLPQLPAIGRALDDLATLAEHA-----GGAAVNIDLADLRGYHYHSGVMFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +            V  +V  GGRYD +   F  +  PATGFS         L   E +
Sbjct: 275 AYVA----------GVPNAVARGGRYDKVGEAFG-RARPATGFS---------LDLREVA 314

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             +  E     I         L +       LR +G
Sbjct: 315 GISPVEARAAAIHAPWSGDARLREAIA---GLRASG 347


>gi|255018988|ref|ZP_05291114.1| histidyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 115

 Score = 98.8 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 1/114 (0%)

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L +LE +   I    P+ +  +    ++  K       LR  GI AE      + F  Q
Sbjct: 3   ILLALEKADIEIPAKKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKFKAQ 61

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           LK A+R+N    II G  E   G  Q+K++  G++ +               + 
Sbjct: 62  LKDANRKNAVYTIILGEEELQTGNYQLKNMETGEQEAVSETTILEKLSNTKGEK 115


>gi|325831978|ref|ZP_08165075.1| ATP phosphoribosyltransferase [Eggerthella sp. HGA1]
 gi|325486299|gb|EGC88751.1| ATP phosphoribosyltransferase [Eggerthella sp. HGA1]
          Length = 581

 Score = 98.8 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 77/340 (22%), Positives = 128/340 (37%), Gaps = 36/340 (10%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           +K  +    P GF D  + E  +R RI   ++  +   G+ PIETP LE  D +      
Sbjct: 24  RKRTMDYVTPAGFRDVLSDEACMRERIARDVQACFAARGYLPIETPTLEVMDVMRAGGRM 83

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR-NEKHG 121
              P    F   D  G  +++R D+T  +AR  A        P R   +  VFR  E   
Sbjct: 84  PGSP----FKFFDASGDLLAMRPDVTLQVARMCATRLAGQPGPFRFRYMQRVFREAEGRM 139

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
             + R+  Q  V+ +G +   ADAE+  +MA+ LE  G +     +         G+L  
Sbjct: 140 QAQAREMTQIGVECIGEAGPQADAEVVELMAEALELAGARGCKLALATV------GVLRA 193

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +             VL A    +      V  L GE                      + 
Sbjct: 194 LLAASGASAQWTERVLAAFHASNFV---EVDRLTGEAAAVPPVFAAA-----------IR 239

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           +   I   +   E    +   +  E G ++     +L+ ++G  ++RI +  +++   +Y
Sbjct: 240 ALPRIRGGREAVEEVRALVAPLGCEDGLDDFARTCDLLAEAG-LADRILVDFSVMSSFDY 298

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
           YTG V+EA                  +G GGRYD ++  +
Sbjct: 299 YTGIVFEAYAPELGT----------PLGSGGRYDNMIGSY 328


>gi|300113242|ref|YP_003759817.1| histidyl-tRNA synthetase 2 [Nitrosococcus watsonii C-113]
 gi|299539179|gb|ADJ27496.1| histidyl-tRNA synthetase 2 [Nitrosococcus watsonii C-113]
          Length = 397

 Score = 98.8 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 148/398 (37%), Gaps = 48/398 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + +++ ++G+D +  PL+EY +SL   +  +       
Sbjct: 9   LPEGVGELLPIEAEQMECARRVLIDLFHSWGYDLVAPPLIEYLESLLTGVGTDLEL--QT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T  +AR +A +        R   IG V      G G  R  I
Sbjct: 67  FKLTDQLTGRLMGVRADITPQVAR-IAAHCIQRKGVTRLCYIGSVLHTLSQGLGGTRNPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G S   +D E+  +  + L++VGIK    H+ + +  I   ++ +  L  +++
Sbjct: 126 QVGAELYGHSGTESDLEVLRLALEALDSVGIK--QVHLDLGHVGIFRDLVLQANLSPEEE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                   +L     D      +  +++ +   + ++  S++  
Sbjct: 184 YALFY-------------------ILQRKARDEIDTMLQNRDVSPKLRHMFMALTSLNGG 224

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +    E V      E+  + L  ++ L+ +       +      +RG  Y+TG V+ A
Sbjct: 225 REVLNEAEQVLAGSGVEQALSTLKEVAALIDRY-LPRVPMHFDLGELRGYRYHTGLVFAA 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +          P    +V  GGRYD +   F     PATGFS+ +  L+          
Sbjct: 284 YI----------PGRGQAVAQGGRYDDIGRVFGRAQ-PATGFSMDLKELVTL-------- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                     +      S++    +   + LR  G R 
Sbjct: 325 --GSSTRTARLGIFAPWSEAPGFEREVAR-LRQQGERV 359


>gi|83719752|ref|YP_442765.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           thailandensis E264]
 gi|167619833|ref|ZP_02388464.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           thailandensis Bt4]
 gi|257138975|ref|ZP_05587237.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           thailandensis E264]
 gi|109892205|sp|Q2SWD4|HISZ_BURTA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|83653577|gb|ABC37640.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           thailandensis E264]
          Length = 382

 Score = 98.8 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 85/395 (21%), Positives = 136/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL     +E R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGNELRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    GPV      G    R+ +
Sbjct: 64  FKLVDQVSGRTLGLRADMTPQVARIDA-HLLNRQGVTRLCYAGPVLHTRPRGLHASREQL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+K+                     +  D  
Sbjct: 123 QIGAEIYGHAGLEADQEIQQLMLDALHLAGLKK---------------------IRLDLC 161

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               L  L A D       + +   L         + T      +      +  L  D  
Sbjct: 162 HAGVLAALFARDAAAAGRGEALYEALAGKDVPRLNELTDDLGADTRAALRALPRLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++  V+        + I    +RG  Y++G ++ A
Sbjct: 222 -VLDEARRQLPALPEIARALDDLAHLASQVK-----DAEVAIDLADLRGYAYHSGAMFAA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  +V  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YV----------DGVPNAVAHGGRYDHVGQAYG-RARPATGFS---------LDLREIAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPVEARGAAILAPWKQDDALRAA---VGALRDAG 347


>gi|187928162|ref|YP_001898649.1| ATP phosphoribosyltransferase regulatory subunit [Ralstonia
           pickettii 12J]
 gi|229464981|sp|B2U9V9|HISZ_RALPJ RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|187725052|gb|ACD26217.1| tRNA synthetase class II (G H P and S) [Ralstonia pickettii 12J]
          Length = 387

 Score = 98.8 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 80/396 (20%), Positives = 133/396 (33%), Gaps = 56/396 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 7   LPESIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYIESLLSGTGHDLDLK--T 64

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ I LR D+T  +AR  A +        R    G V      G    R+ +
Sbjct: 65  FKLVDQLSGRTIGLRADITPQVARIDA-HLLNRAGVTRLCYAGSVLHTRPSGFHVTREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M            D  + + +  ++  +LE         
Sbjct: 124 QIGAEIYGHAGLEADLEIQELMLA--ALSAAGLADVRLDLCHVGVVAALLE--------- 172

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +  I  R  D L                 D         +L   Q D +    ++   
Sbjct: 173 --QSPIAARIQDDLFTAL----------AAKDVPALRAITVDLPPAQRDAINLLPALYGG 220

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +    + +    A  +  ++L  ++E           + I    +RG  Y++G ++ 
Sbjct: 221 VDVLARARKQLPALPAIGRALDDLATLAERA-----GGATVNIDLADLRGYHYHSGVMFT 275

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +            V  +V  GGRYD +   F  +  PATGFS         L   E +
Sbjct: 276 AYVA----------GVPNAVARGGRYDKVGEAFG-RARPATGFS---------LDLREVA 315

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             +  E     I         L +       LR AG
Sbjct: 316 GISPVEARAAAIHAPWSGDAKLREAIA---ALRAAG 348


>gi|258510918|ref|YP_003184352.1| Histidine--tRNA ligase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477644|gb|ACV57963.1| Histidine--tRNA ligase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 370

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 130/367 (35%), Gaps = 23/367 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D      + R  +   + +  E+ G++P+ + L EY D+L +        ++  
Sbjct: 22  RPPGMQDGYPDFAKRRRAVETRLLSFVEDAGYEPVTSGLFEYVDTLLR--ARSPESSRDW 79

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
             L D  G  ++LR ++T  +AR  A        P R      V+R             +
Sbjct: 80  IRLFDGGGDAVALRPEMTPSIARMAAPRVAAGRTPIRWCYCERVYRRTDDPASLSWASGK 139

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKR-----NDYHIGINNRKILDGILEKIGLH 185
                        +     +  D L  +           + I +++ +++  +L+ +G+ 
Sbjct: 140 AAESTQVGIERIGEEASVDVDMDVLRLLHEASAAAGVRHHRIVVSHARLVPRLLDALGIS 199

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                +     L  +   +    + +  L      D   +    +    +          
Sbjct: 200 ----ASLSRAFLACLTSGNYVQFRELWQLHAAKDVDLLANLLTWSPAERDAAKRSREASD 255

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +LE  + +  +  +        +  L  ++E +  SG  S+ +     + R L+YYTG 
Sbjct: 256 RELEALLRDAVD-PRAAADVRDAWRYLCRLAEALHDSGLASDVVTFDLALHRELDYYTGL 314

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E             P V   +  GGRYD L+++F     PA GF+  + R++  L++ 
Sbjct: 315 VFEMFA----------PGVGAPIAQGGRYDELLAQFGAG-APAVGFAFEVERVMAVLEAQ 363

Query: 366 ESSTNNI 372
           E      
Sbjct: 364 EEGEGEC 370


>gi|114319738|ref|YP_741421.1| ATP phosphoribosyltransferase regulatory subunit [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|122312367|sp|Q0AB56|HISZ_ALHEH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|114226132|gb|ABI55931.1| tRNA synthetase, class II (G, H, P and S) [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 401

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 126/399 (31%), Gaps = 46/399 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +           +   + + +  +G++ +  P +EY DSL      +       
Sbjct: 14  LPEGVDELLPPRAAQMETLRRQLLDQFGAWGYELVMPPFIEYLDSLLTGTGHDLDV--QT 71

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T  +AR  A +      P R   IG V      G  R R  +
Sbjct: 72  FKLTDQLTGRLMGVRADITPQVARIDA-HRLRREAPSRLCYIGSVLHARPEGISRSRNPV 130

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   +D E+  +   +L   G+     H+ + +  I  G+    G     +
Sbjct: 131 QVGAELFGHAGVESDIEIISLAVASLRTAGV--AQPHLDLGHVGIFRGLARAAGCTPAQE 188

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +   L         +    A +      ++ +   ++  
Sbjct: 189 G-------------------ALLEALQRKAVAEIDELLDEAAIDPHLRRMLRALPQLNGG 229

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +++    E++     G +     +       +       +      +RG  Y+TG V+ 
Sbjct: 230 LEALDHAGEVLAEAPQGVRQALRTLWGVAAGLERRLPDLPLHFDLAELRGYGYHTGIVFA 289

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A++          P     V  GGRYD +   F     PATGFS  +  L+       + 
Sbjct: 290 ALV----------PGYGSEVARGGRYDDIGRVFG-NPRPATGFSADLRTLVQVADGQPAV 338

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                              +         + LR  G R 
Sbjct: 339 PAGKG-------VLAPWGDE--PDLIKVIEALRAEGERV 368


>gi|296136222|ref|YP_003643464.1| tRNA synthetase class II (G H P and S) [Thiomonas intermedia K12]
 gi|295796344|gb|ADG31134.1| tRNA synthetase class II (G H P and S) [Thiomonas intermedia K12]
          Length = 383

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/307 (18%), Positives = 108/307 (35%), Gaps = 29/307 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            LP  F+D   +E  +   +  +  +    YG+  +  PLLE+ DSL      +      
Sbjct: 5   RLPEYFSDVLPREAAVIEHLRRACLDTARGYGYALVMPPLLEFVDSLLSGTGQDLDL--Q 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            F L D   G+ + LR D+T   AR  A +        R    G   R    G    R+ 
Sbjct: 63  TFKLIDQISGRALGLRADMTPQAARIDA-HLLNQDGVTRVCYCGSAVRTHPEGVHASREI 121

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +   AD E+  +  D L   G+      + + + +I+ G+L  + L   D
Sbjct: 122 LQFGAELYGHAGLEADLEVQQLALDCLRLAGV--ERAALDLADNRIVRGVLSGLLLGSQD 179

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                  +   +D L       ++LL  +              L  +             
Sbjct: 180 -------MEAILDALASKDAGELRLLTRDCTPTQRAAILALPELYGDA------------ 220

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              + E   ++       +  ++L  ++   ++ G    +++I    +RG  Y++G ++ 
Sbjct: 221 -DVLLEARRVLPQHALISQALDDLSALARHHQQQG---AQVQIDLADMRGYRYHSGVIFS 276

Query: 309 AILGFPV 315
                  
Sbjct: 277 VYAQGYA 283


>gi|309782311|ref|ZP_07677038.1| ATP phosphoribosyltransferase, regulatory subunit [Ralstonia sp.
           5_7_47FAA]
 gi|308918929|gb|EFP64599.1| ATP phosphoribosyltransferase, regulatory subunit [Ralstonia sp.
           5_7_47FAA]
          Length = 387

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 73/397 (18%), Positives = 134/397 (33%), Gaps = 58/397 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 7   LPESIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYIESLLSGTGHDLDLK--T 64

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ I LR D+T  +AR  A +        R    G V      G    R+ +
Sbjct: 65  FKLVDQLSGRTIGLRADITPQVARIDA-HLLNRAGVTRLCYAGSVLHTRPSGFHVTREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M            D  + + +  ++  +LE         
Sbjct: 124 QIGAEIYGHAGLEADLEIQELMLA--ALSAAGLADVRLDLCHVGVVAALLE--------- 172

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +  I  R  D+L                 D        A L + Q D +    ++   
Sbjct: 173 --QSPIAARIQDELFTAL----------AAKDVPALRAVTAELPAAQRDAINLLPALYGG 220

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +    + +    A  +  ++L  ++E  R        + I    +RG  Y++G ++ 
Sbjct: 221 AEVLDLARKQLPALPAIGRALDDLTTLAERAR-----GATVNIDLADLRGYHYHSGVMFA 275

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG-QNVPATGFSIGISRLIVALKSLES 367
           A +            V  +V  GGRYD +   F   +        +     I  +++  +
Sbjct: 276 AYVA----------GVPNAVARGGRYDKVGEAFGRARPATGFSLDLREVAGISPVEARAA 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           + +                    +K +     LR AG
Sbjct: 326 AIHAPWSGD--------------AKLRETIAALRAAG 348


>gi|297538140|ref|YP_003673909.1| histidyl-tRNA synthetase 2 [Methylotenera sp. 301]
 gi|297257487|gb|ADI29332.1| histidyl-tRNA synthetase 2 [Methylotenera sp. 301]
          Length = 386

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 73/410 (17%), Positives = 151/410 (36%), Gaps = 46/410 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D    E      +  ++ ++++ +G+  +  P+LEY +SL   +  +       
Sbjct: 6   LPEYIEDVLPAEAARIETLRRTLLDLFKVHGYQYVIPPMLEYMESLITGVGHDLDL--AT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T   AR  A +        R    G V R +  G  + R+ +
Sbjct: 64  FKVVDQLTGRLMGVRADMTPQAARIDA-HLLNHQGITRLCYAGSVLRTKPDGLAQTREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   +D E+  ++   L+A+G   +  H+  ++  I   ++E   +    +
Sbjct: 123 QLGAELYGHAGVASDIEIQRLLIRALQAIG--IDQLHMDFSHVNIFGSLIEASQVASQLE 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 +                        D S       +L     + ++    ++ +
Sbjct: 181 QELYAALQS---------------------KDQSSVAALSQHLDKTTREALLHLTELNGD 219

Query: 250 KSMHELYEL-VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           KS+    E  +  T A ++    L  +S  +         +    + +RG  Y++G V+ 
Sbjct: 220 KSILTKAEKVLPNTAAIKEALASLSQVSTALE---GLDVTVSFDLSELRGYHYHSGIVFA 276

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                G +  GGRYD +   F  +   ATGFS+ +  ++ AL+  + +
Sbjct: 277 AYAQ----------GYKGPLALGGRYDEVGQAFG-RARSATGFSLDLRGVVTALQPAKPN 325

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGSSKNF 417
                        ++  DS   +  Q+  Q L  +G  + +  L   +  
Sbjct: 326 MAIFAPANDDASLSVKIDS-LRADGQIVIQEL--SGFESNLDELNCDRKL 372


>gi|255077416|ref|XP_002502349.1| predicted protein [Micromonas sp. RCC299]
 gi|226517614|gb|ACO63607.1| predicted protein [Micromonas sp. RCC299]
          Length = 1466

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 75/494 (15%), Positives = 148/494 (29%), Gaps = 71/494 (14%)

Query: 27   NRILDSIRNIYENYGFDPIETPLL----EYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             R+L ++R  +  +G  P+ +  +    E    L +   +          L    G  + 
Sbjct: 1009 ERMLTTLRATFRRHGASPLSSRAVNWLKEGDTILSQAGGEGH-------RLLSPSGALVV 1061

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR---------------FRQ 127
            LR DL + L R  A          R   +G  FR+   GP                  R+
Sbjct: 1062 LRRDLRSSLVRQAAA---EEATTLRASCVGITFRSSAPGPKDGGTGGAKSGGGGGGLPRE 1118

Query: 128  FIQCDVDNVGSSAETADAEMCMMMADT-LEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
             +Q D D +     T  +           +A+  +     + +N+R+IL     + G+  
Sbjct: 1119 HVQADFDIIAPKESTEASIADAEAIKCAWDALVERGLSPRVSLNHRRILAAAWIRAGVPS 1178

Query: 187  DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            + +     I+ R            V        +  + D        +    +M   +  
Sbjct: 1179 EFRPRTAAILRRDASLTAIRLPPEVVKRTAALHSLRAEDPV------AATAQLMHELVGS 1232

Query: 247  DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
               +          G+       + L  +S  +   G  ++RI +S  +     Y+    
Sbjct: 1233 SSTQK--------TGSTVLLSAIDHLRAVSAHLECMGVPASRISVSPLLPPPEPYHCAGF 1284

Query: 307  YEAILGFPVMNEKQKPVVFGSVGGGGRYDGL-----VSRFKGQNVPATGFSIGISRLIVA 361
            +E  +                V  GGRYD        S          G S+ + +    
Sbjct: 1285 FELTVHTSNSPSTGAAANGVCVAAGGRYDSWLSTVWPSHAAHPPPGGVGVSVAVRKAATL 1344

Query: 362  LK---SLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                     S + +       +          + +       L   GIRAE+   ++ + 
Sbjct: 1345 AASAAQRTKSPHVVAAAAATDVIVCARGGGGLIQERLALAAELWANGIRAEVVPSTAPSA 1404

Query: 418  GNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREARVAQITI 476
              Q +YA +R     +       S G  +++K L +G +                 +  +
Sbjct: 1405 TEQYQYAGQRGARFMVTVDGALLSAGERVRVKGLGRGGQ-----------------ERDV 1447

Query: 477  PISELVSTVKKILQ 490
               E+V  ++ +L 
Sbjct: 1448 SRQEVVDLLRGMLS 1461


>gi|171780010|ref|ZP_02920914.1| hypothetical protein STRINF_01797 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281358|gb|EDT46793.1| hypothetical protein STRINF_01797 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 322

 Score = 98.4 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 76/361 (21%), Positives = 135/361 (37%), Gaps = 48/361 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T     LP G  D   K  R+  +I   I +   + GF+ IETP LE+ +      
Sbjct: 1   MKKTT-----LPVGMHDKLFKRARVTYKIERDISDFLMSQGFNRIETPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D  NK  ++  D  G+ ++LR D+T+ + R +A     +  P +    G VF+  + 
Sbjct: 52  --SDTLNKNNYNFFDKSGELLTLRPDITSQIGRVIAS--TQVETPIKFSYSGKVFKYNEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ VG  A+ A  E       +L+   I    +    ++  I   I +
Sbjct: 108 MSGLMNEHTQAGIEIVGYPAKEAVYEAIASAKASLDKADIPSYQFE--FSHAGISQTIFD 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L    +                   + + L L +       + TK      +     
Sbjct: 166 DLNLPAAAE-------------------KELDLALKDKNITQLNELTKKYPSEFDDFLKN 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L  +  + + +  +LVK   +      +L  +   V      SN   I    +  + 
Sbjct: 207 LPYLFGESHQVLSKARKLVK-NESVLAALTDLEDLLAQVSDILPESN---IDLAQIPSMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++               V  +   GGRYD L  RF  + + A G+++ I  +  
Sbjct: 263 YYTGVMFKVF----------GDKVPDAFASGGRYDKLFERFGAKKLTAVGWAVDIDAIYQ 312

Query: 361 A 361
           A
Sbjct: 313 A 313


>gi|197123002|ref|YP_002134953.1| histidine--tRNA ligase [Anaeromyxobacter sp. K]
 gi|229890102|sp|B4UGX0|HISZ_ANASK RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|196172851|gb|ACG73824.1| Histidine--tRNA ligase [Anaeromyxobacter sp. K]
          Length = 349

 Score = 98.4 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 114/302 (37%), Gaps = 26/302 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L   LP G  D           +   + +++  +G+  +  P LE  D + + L      
Sbjct: 2   LDLSLPSGLRDLLPDHSAHLAELSSKLHDVFSRFGYRRVFLPTLERLDVVERGL--SPAA 59

Query: 67  NKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
              V    +   G+ +++R D+T  +AR  A   D +  P R    GPV R  +   GR 
Sbjct: 60  LADVMKFVEPGSGEVVAIRPDITPQIARLYAARPDALPSPARLCYDGPVLRAREARAGRP 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+  Q  V+ +G+   +ADAE  +++A +LE VG+K     + + + +  + ++E   L 
Sbjct: 120 REVYQAGVELLGAGGASADAEALVLLARSLERVGLKAP--RVEVGHARFAEAVMEAARLP 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +                      + L  + R   +    KG   ++E  + +     
Sbjct: 178 ERLRSAAW------------------EALSRKDRAALAAAAAKGRG-SAEAREAVPQLAG 218

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +  + ++     + +          E      + R+ G     + +     RGL YYTG 
Sbjct: 219 LFGDGALDRARAIARAVPEAAAPLAETEAALRIARRRGVREVAVDLG--EARGLGYYTGI 276

Query: 306 VY 307
            +
Sbjct: 277 TF 278


>gi|87122640|ref|ZP_01078517.1| tRNA synthetase, class II (G, H, P and S) [Marinomonas sp. MED121]
 gi|86162098|gb|EAQ63386.1| tRNA synthetase, class II (G, H, P and S) [Marinomonas sp. MED121]
          Length = 392

 Score = 98.4 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 72/403 (17%), Positives = 144/403 (35%), Gaps = 37/403 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +   ++     ++   + N++  +G+D +  PLLEY DSL      +       
Sbjct: 9   LPEGVDEALPEQAEKIEQLRRVLLNLHGRWGYDLVIPPLLEYLDSLLTGAGSDLEL--ET 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D T+ +AR  A          R    G V R    G    R  I
Sbjct: 67  FKVIDQLSGRLMGIRADFTSQVARIDA-RCIKEQGVQRLSYCGSVLRTIPAGLDGSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     +D E+  +M +TLE  GIK     + + +  I+ G++E   ++  DK
Sbjct: 126 QMGAELYGHGGVESDIEILSLMLETLEVAGIKSP--VLDLGHVDIVRGVIEASSINEGDK 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                              + +              F    +++ +Q   +++   +   
Sbjct: 184 -------------------ETLADFYRSKALPELESFVSSLSISEQQKAWLIALPRLCGG 224

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           EK + E   +  G     +     +V  +   ++ + +  +    + +    Y+TG V+ 
Sbjct: 225 EKVLAEAQAIFAGAGKKIEDALASLVAIKTQVQARFPNVGLHFDLSDLVSYSYHTGLVFA 284

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P    ++  GGRY+ +   F  ++ PATGFS  +  L+         
Sbjct: 285 AYV----------PGFGNAIARGGRYNNIGEVFG-RSRPATGFSTDLKTLVSLADIKVEK 333

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              +       ++         ++     + L     + +   
Sbjct: 334 AKRVLVPVATDVSLWQAIQALRAQNYQVVEQLTELDSQVDYDY 376


>gi|306833884|ref|ZP_07467008.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           bovis ATCC 700338]
 gi|304423885|gb|EFM27027.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           bovis ATCC 700338]
          Length = 329

 Score = 98.4 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 135/362 (37%), Gaps = 44/362 (12%)

Query: 1   MGKKTKLR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M    K++   LP G  D   K  R+  +I   I +   + GF+ IETP LE+ +     
Sbjct: 2   MLGVDKMKKTTLPVGMHDKLFKRARVTYKIERDISDFLMSQGFNRIETPTLEHFEVF--- 58

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
               D   K  ++  D  G+ ++LR D+T+ + R +A     +  P +    G VF+  +
Sbjct: 59  ---SDTITKNNYNFFDKSGELLTLRPDITSQIGRVIAS--TQVETPIKFSYSGKVFKYNE 113

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              G   +  Q  V+ VG  A+ A  E      + L+   I    +    ++  IL  I 
Sbjct: 114 EMRGLMNEHTQAGVEIVGFPAKEAVFEAIQSAKEALDRADIPSYQFE--FSHAAILQTIF 171

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           E + L    +                   + +   + +       +FT+      ++   
Sbjct: 172 ETLALPQAVE-------------------ETLAQAIKDKNITQLNEFTQKYPSEFDEFLK 212

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
            + +L  +  + +     LVK     +     L  +  L+ +      +  I    +  +
Sbjct: 213 NLPYLFGESHQVLESARVLVKN----QAILAALTDLENLLNQVSEILPKSNIDLAQIPTM 268

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            YYTG +++               V  +   GGRYD L  RF  + + A G+++ I  + 
Sbjct: 269 PYYTGVMFKVF----------GDKVPDAFASGGRYDKLFERFGAKKLTAVGWAVDIDAVY 318

Query: 360 VA 361
            A
Sbjct: 319 QA 320


>gi|23098008|ref|NP_691474.1| histidine-tRNA ligase [Oceanobacillus iheyensis HTE831]
 gi|46395854|sp|Q8CXM7|HISZ_OCEIH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|22776232|dbj|BAC12509.1| histidine-tRNA ligase (histidyl-tRNA synthetase) [Oceanobacillus
           iheyensis HTE831]
          Length = 405

 Score = 98.4 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 148/431 (34%), Gaps = 60/431 (13%)

Query: 19  PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
             ++   +  ++  I+N +  YG+D IETPL E  D               +  +    G
Sbjct: 12  FPEDFLKKANVIKQIQNRFYTYGYDQIETPLFEDYDMYSNVQG--TVQQDDMVKVIHSSG 69

Query: 79  QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
           + + LR D+T P+ R   E  D      R      +FR  +          Q  V+  G 
Sbjct: 70  RVLVLRPDVTIPITRQYVE-TDMTSHYQRFSYCLDIFRFNETQ---QAYRTQAGVEFFGD 125

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
            +  ADAE+  +  D+L+ +  K   + I I +  I   +LE+  L   ++         
Sbjct: 126 ESPEADAEVIALAIDSLKDL--KIAPFKIEIGHSGIYKELLEQANLTDQEQQTLH----- 178

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYE 257
                          L+       +  F    ++  +    +     +  +  ++ +  +
Sbjct: 179 --------------ALIQSKNISETSSFLDHLSIDQDLKQKIELIPMLYGDPSTVIKRAQ 224

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            +      ++  + L  +  L++        I  +  ++  + YY+G +++         
Sbjct: 225 AIVTNETMQQVVDTLFNVYSLLKD-DQIEEYISFNLGLINNMNYYSGIIFQGFTEQIGQ- 282

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
                     +  GGRYD L S+F+   +PA GF+  I +L+  +      T   + +  
Sbjct: 283 ---------PILMGGRYDHLSSQFE-NEIPAVGFAFEIDKLLTLI------TPGDQPLIT 326

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
                +++  +      +  + LR A  +  +    S +         +      I+   
Sbjct: 327 QADFLIEYQPNCRQDALLLARRLRQANKKVIIQPTESSS---------KIKASNIILV-- 375

Query: 438 GERSRGMLQIK 448
                   Q+K
Sbjct: 376 ---DSNSYQLK 383


>gi|297624948|ref|YP_003706382.1| Histidine--tRNA ligase [Truepera radiovictrix DSM 17093]
 gi|297166128|gb|ADI15839.1| Histidine--tRNA ligase [Truepera radiovictrix DSM 17093]
          Length = 388

 Score = 98.0 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 80/427 (18%), Positives = 145/427 (33%), Gaps = 70/427 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++   P G      +E   R R + ++R ++ ++G++ ++ P+LE  D            
Sbjct: 1   MKLSPPEGTRYALAQESAARGRAVGTLRALFSSWGYERVDVPVLERFDPAHPVAERS--- 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENF-DTIVFPCRTYRIGPVFRNEKHGPGRF 125
               F L   DG+ ++LR D T  LA+ V  N+   +  P R    G ++R       R 
Sbjct: 58  ----FKLTGPDGELLALRADFTFALAKLVRYNYPQGLPGPLRLQYAGGLWRTVVPDIART 113

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+F Q  ++ +G S   ADAE+  +  + + AVG+            + L  + E     
Sbjct: 114 REFTQVGLELLGVSGPRADAELIHLAREAVRAVGLTPRVEIGNPGFVRRLFELAE----- 168

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                            L +     V   +            +   L S+    +++   
Sbjct: 169 -----------------LPEALQGPVANAIDRKDPTTLKALLEPLRLASDLERALLAVPD 211

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +  +  +      +            L  + E         + + +   + R L YYTG 
Sbjct: 212 LYGDARVLGAARRLAPWPETRAACEHLEAVLEEFENR----SELLLDLGMARRLAYYTGV 267

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           ++ A                  + GGGRYDG +         A GF++G+ RL+ AL  +
Sbjct: 268 MFRAYTFDFGQ----------PLLGGGRYDGALLPL------AAGFAVGLERLLSALPEV 311

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN-FGNQLKYA 424
                            +  D +         + LR  G R E  L +  +   +   YA
Sbjct: 312 SGEAPP---------LVLSLDDEG-------ARRLRARGFRVERALSAEVSELRS---YA 352

Query: 425 DRRNCPL 431
             R    
Sbjct: 353 KARGIAY 359


>gi|39996560|ref|NP_952511.1| prolyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81832056|sp|Q74D59|SYP_GEOSL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|39983441|gb|AAR34834.1| prolyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505576|gb|ADI84299.1| prolyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 570

 Score = 98.0 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 63/543 (11%), Positives = 140/543 (25%), Gaps = 83/543 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R   ++   +R   +  G   +  P ++ ++   +     ++ 
Sbjct: 31  MIRKLAAGIYNYLPLGLRSIRKVETIVREEMDRAGAIELLMPSVQPAELWQEST-RWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +   +D       L     ++   + R       +    +      +R     R   
Sbjct: 90  GKELLRFKDRKDAEFCLGPTHEEVVTDIVRREVKSYRQMPFNLYQIQAKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI- 178
                F        D   S+++ +  +M        +  G+K         +        
Sbjct: 150 MRGREFIMKDAYSFDVDSSASDLSYDKMYQAYRRIFQRCGLKFRAVEADTGSIGGSSSHE 209

Query: 179 LEKIGLHGDDKLNERLIVLRAID-------KLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
              +   G+D +        A +              +   L   E     S +      
Sbjct: 210 FMVLADSGEDAIVSCTQCEYAANVEKAEARPAPAEHAEPRPLEKVETPAKRSVEEVTAFL 269

Query: 232 LTSEQIDIMVSFLSIDL---------EKSMHELY-ELVKGTIAGEKGFNELVVISELVRK 281
                  +    +  D          +  ++E+  + + G    E    E+V        
Sbjct: 270 GIPSSALVKTLLVVADGTPVAALVRGDHDLNEIKLKHLLGCETLEMANEEMVTRVTG--A 327

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
               +  + ++  IV  L       +  + G    +   K V  G      +Y  + +  
Sbjct: 328 PVGFAGPVGLNIKIVADLAVQGMKNF--VTGANAGDLHLKNVTIGRDFTPTQYADIRNVV 385

Query: 342 KGQNVPAT--------------------------------------------GFSIGISR 357
            G   P                                               + IGISR
Sbjct: 386 HGDPCPRCEAGHLELWRGIEVGHVFKLGTKYSEALRATYLDADGKEQIIFMGCYGIGISR 445

Query: 358 LIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            + A                I     ++      D++ ++  +     LR AG+      
Sbjct: 446 TVAACIEQNHDADGIIFPIPIAPFHCIVSAVNTKDAEVMAACESLYLDLRAAGVEVLFDD 505

Query: 412 -GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                      K AD    PL ++ G+   + G +++K    G+     +          
Sbjct: 506 RDERPGIK--FKDADLIGIPLRLVVGSKNLADGKVELKSRRTGEVELLPLAGAVEKVRNI 563

Query: 471 VAQ 473
           VA+
Sbjct: 564 VAE 566


>gi|161353434|ref|NP_897369.2| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           WH 8102]
 gi|46395728|sp|Q7U6R1|HISZ_SYNPX RecName: Full=ATP phosphoribosyltransferase regulatory subunit
          Length = 392

 Score = 98.0 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 62/417 (14%), Positives = 132/417 (31%), Gaps = 43/417 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++     + + + +++  +G+D +  P +E  D+L          
Sbjct: 1   MALQPAAGARDLNPRQVESNRALSERLASVFRLWGYDEVSPPRVERLDTLMAGGA---IA 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ V  L     + + LR ++TA +AR       +   P R +  G VF++     G   
Sbjct: 58  SEDVVRLV--ADEPLGLRPEMTASIARAACTRLASRPRPLRLWASGTVFQSRAADEGGQC 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                                                     +    +L   +E++    
Sbjct: 116 IEENLQCGVELFGVAP----------------------IEAEMELLSLLMAAVERLDFQA 153

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +    +     +D L       ++  +            +   L       ++S L  
Sbjct: 154 QHQPRLLMGHTGLMDLLLSPVPPVLRDAVRAALIQYDRLGLETIELEEGLRATLLSLL-- 211

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS-NRIKISSTIVRGLEYYTGC 305
           D   + +E+ E +      +  F++L  +   ++        R+++  T     E YTG 
Sbjct: 212 DCRGTPNEVLERLSSCFGAQALFDDLHRLCRQLQGPAAAQGVRLQLDPTFQPRFELYTGL 271

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V++ +                 V  GGRYD LV   +    P   F  G S  I  ++ L
Sbjct: 272 VFQLVC--------DTHSAPVVVARGGRYDDLVR--RCGAQPGQDFGAGFSLAIDPIREL 321

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA--EMFLGSSKNFGNQ 420
             S ++        +     +  +L       +     G  A  E+   S+++   Q
Sbjct: 322 -LSDSSSNPTVAPQLMVAFSERSTLEAALERQRWWHQQGRSAVIELHPFSTRSLAEQ 377


>gi|33632980|emb|CAE07791.1| histidyl-tRNA synthetase paralog [Synechococcus sp. WH 8102]
          Length = 414

 Score = 98.0 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 62/417 (14%), Positives = 132/417 (31%), Gaps = 43/417 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++     + + + +++  +G+D +  P +E  D+L          
Sbjct: 23  MALQPAAGARDLNPRQVESNRALSERLASVFRLWGYDEVSPPRVERLDTLMAGGA---IA 79

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ V  L     + + LR ++TA +AR       +   P R +  G VF++     G   
Sbjct: 80  SEDVVRLV--ADEPLGLRPEMTASIARAACTRLASRPRPLRLWASGTVFQSRAADEGGQC 137

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                                                     +    +L   +E++    
Sbjct: 138 IEENLQCGVELFGVAP----------------------IEAEMELLSLLMAAVERLDFQA 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +    +     +D L       ++  +            +   L       ++S L  
Sbjct: 176 QHQPRLLMGHTGLMDLLLSPVPPVLRDAVRAALIQYDRLGLETIELEEGLRATLLSLL-- 233

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS-NRIKISSTIVRGLEYYTGC 305
           D   + +E+ E +      +  F++L  +   ++        R+++  T     E YTG 
Sbjct: 234 DCRGTPNEVLERLSSCFGAQALFDDLHRLCRQLQGPAAAQGVRLQLDPTFQPRFELYTGL 293

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V++ +                 V  GGRYD LV   +    P   F  G S  I  ++ L
Sbjct: 294 VFQLVC--------DTHSAPVVVARGGRYDDLVR--RCGAQPGQDFGAGFSLAIDPIREL 343

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA--EMFLGSSKNFGNQ 420
             S ++        +     +  +L       +     G  A  E+   S+++   Q
Sbjct: 344 -LSDSSSNPTVAPQLMVAFSERSTLEAALERQRWWHQQGRSAVIELHPFSTRSLAEQ 399


>gi|146332229|gb|ABQ22620.1| histidyl-tRNA synthetase-like protein [Callithrix jacchus]
          Length = 122

 Score = 98.0 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 43/117 (36%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           R+   ++    +           +         L +       L  AGI+AE+    +  
Sbjct: 1   RIFSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPK 60

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             NQL+Y +    PL  I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 61  LLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 117


>gi|218288356|ref|ZP_03492646.1| Histidine--tRNA ligase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241329|gb|EED08503.1| Histidine--tRNA ligase [Alicyclobacillus acidocaldarius LAA1]
          Length = 370

 Score = 98.0 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 127/361 (35%), Gaps = 23/361 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G  D      + R  +   + +  E+ G++P+ + L EY D+L +        ++  
Sbjct: 22  RPPGMQDGYPDFAKRRRAVETRLLSFVEDAGYEPVTSGLFEYVDTLLR--ARSPESSRDW 79

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
             L D  G  ++LR ++T  +AR  A        P R      V+R             +
Sbjct: 80  IRLFDGGGHAVALRPEMTPSIARMAAPRVAAGRTPIRWCYCERVYRRTDDPASLSWASGK 139

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKR-----NDYHIGINNRKILDGILEKIGLH 185
                        +     +  D L  +           + I +++ +++  +L+ +G+ 
Sbjct: 140 AAESTQVGIERIGEEASVDVDMDVLRLLHEASAAAGVRHHRIVVSHARLVPRLLDALGIS 199

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                     +        +   Q    L      D   +    +    +          
Sbjct: 200 ASLSRAFLAFLTSGNYVQFRELWQ----LHAAKDVDLLANLLTWSPARRDSAKRSREASD 255

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            +LE  + +  +  +        +  L  +++ +  SG  S+ +     + R L+YYTG 
Sbjct: 256 RELEALLADAVD-PRAAADVRDAWRYLCRLADALEDSGLASDVVTFDLALHRELDYYTGL 314

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E             P V   +  GGRYD L+++F     PA GF+  + R++  L++ 
Sbjct: 315 VFEMFA----------PGVGAPIAQGGRYDELLAQFGAG-APAVGFAFEVERVMAVLEAQ 363

Query: 366 E 366
           E
Sbjct: 364 E 364


>gi|224106207|ref|XP_002333711.1| predicted protein [Populus trichocarpa]
 gi|222838319|gb|EEE76684.1| predicted protein [Populus trichocarpa]
          Length = 173

 Score = 98.0 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 5   TKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
            K+    P+G  D P +E+R+R  +  + + +   +GF+ ++ P+LE      +   +E 
Sbjct: 85  QKIDVNPPKGTRDFPPEEMRLRGWLFHNFKEVSRLFGFEEVDYPVLESEALFIRKAGEEI 144

Query: 65  RPNKGVFSLQDDDGQWISLRYD 86
           R    ++  +D   + ++LR D
Sbjct: 145 RD--QLYCFEDRGNRRVALRPD 164


>gi|83747957|ref|ZP_00944988.1| Histidyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207723174|ref|YP_002253573.1| atp phosphoribosyltransferase involved in histidine biosynthesis
           protein [Ralstonia solanacearum MolK2]
 gi|207743433|ref|YP_002259825.1| atp phosphoribosyltransferase involved in histidine biosynthesis
           protein [Ralstonia solanacearum IPO1609]
 gi|83725375|gb|EAP72522.1| Histidyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206588368|emb|CAQ35331.1| atp phosphoribosyltransferase involved in histidine biosynthesis
           protein [Ralstonia solanacearum MolK2]
 gi|206594830|emb|CAQ61757.1| atp phosphoribosyltransferase involved in histidine biosynthesis
           protein [Ralstonia solanacearum IPO1609]
          Length = 386

 Score = 98.0 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 112/329 (34%), Gaps = 43/329 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 6   LPESIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYIESLLSGTGHDLDLK--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ I LR D+T  +AR  A +        R    G V      G    R+ +
Sbjct: 64  FKLVDQLSGRTIGLRADITPQVARIDA-HLLNRAGVTRLCYAGSVLHTRPSGFHVTREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M            D  + + +  +L  +L++  +  D +
Sbjct: 123 QIGAEIYGHAGLEADLEIQDLMLA--ALSAAGLADVRLDLCHVGVLAALLDQAPVAPDVQ 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 +                        D          L + Q D +    S+   
Sbjct: 181 DELFTALAS---------------------KDVPALHAMTTGLPAVQRDAINLLPSLYGG 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +      +    A  +  ++L  ++E           + I    +RG  Y++G ++ 
Sbjct: 220 ADVLARARAQLPQLPAIGRALDDLATLAEHA-----GGAAVNIDLADLRGYHYHSGVMFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
           A +            V  +V  GGRYD +
Sbjct: 275 AYVA----------GVPNAVARGGRYDKI 293


>gi|134295833|ref|YP_001119568.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           vietnamiensis G4]
 gi|166219826|sp|A4JEN0|HISZ_BURVG RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|134138990|gb|ABO54733.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia
           vietnamiensis G4]
          Length = 382

 Score = 98.0 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 136/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLCHAGVLAALL---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D       + +   L         + T      +      +  L  D  
Sbjct: 171 ---------ARDAQAAARGEALYDALSGKDVPLLHELTDDLGADTRAALRALPHLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++   +        + +    +RG  Y++G ++ A
Sbjct: 222 -VLDEARARLPVLPEITRALDDLAQLAASAK-----GVEVAVDLADLRGYAYHSGAMFTA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  ++  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YI----------DGVPNAIARGGRYDHVGQAYG-RARPATGFS---------LDLRELAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+LS        LR AG
Sbjct: 316 ISPVEARGTAILAPWAQDDALSAA---VAALRDAG 347


>gi|222110313|ref|YP_002552577.1| histidyl-tRNA synthetase 2 [Acidovorax ebreus TPSY]
 gi|254801983|sp|B9MFY6|HISZ_DIAST RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|221729757|gb|ACM32577.1| histidyl-tRNA synthetase 2 [Acidovorax ebreus TPSY]
          Length = 382

 Score = 97.6 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 76/408 (18%), Positives = 139/408 (34%), Gaps = 56/408 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +   +YG++ +  PLLE+ +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLLDTARSYGYELVMPPLLEHLESLLTGTGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQLSGRSLGLRADTTQQVARIDA-HLLNRQGVARLCYCGPVLHTRPDRPHATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     AD E  ++  + L +      +  + + + +I+  +L  + +     
Sbjct: 123 QFGAEIYGHPGIEADIEAVLLSLECLRS--AHAQEVSVDLADVRIVRSLLAGLPV----- 175

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                             L  V   L           T+     S   + +++ L +  +
Sbjct: 176 --------------GMHQLAQVHGALAAKDASELASLTRDFP--SASREGLLALLQLYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + ++E   L+K      +  ++L  I+  +        R+      +RG  YY+G  + 
Sbjct: 220 ATVLNEAENLLKPFPGAREALSDLRAIAARMD-----GVRVTFDLADLRGYAYYSGARFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                             ++  GGRYD + + F  +N PA GFS+ + +L+  + +    
Sbjct: 275 IYAQ----------GASDALVRGGRYDEVGAVFG-RNRPAAGFSLDVKQLVGVVSAPSLR 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                            D  +LS        LR  G      L    +
Sbjct: 324 AAIRAPW---------GDGGALSAAIA---TLRRQGETVVCVLPGHGS 359


>gi|167581717|ref|ZP_02374591.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           thailandensis TXDOH]
          Length = 382

 Score = 97.6 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 85/395 (21%), Positives = 136/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL     +E R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGNELRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    GPV      G    R+ +
Sbjct: 64  FKLVDQVSGRTLGLRADMTPQVARIDA-HLLNRQGVTRLCYAGPVLHTRPRGLHASREQL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+K+                     +  D  
Sbjct: 123 QIGAEIYGHAGLEADQEIQQLMLDALHLAGLKK---------------------IRLDLC 161

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               L  L A D       + +   L         + T      +      +  L  D  
Sbjct: 162 HAGVLAALFARDAAAAGRGEALYEALAGKDVPRLNELTDDLGADTRAALRALPRLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++  V+        + I    +RG  Y++G ++ A
Sbjct: 222 -VLEEARRQLPTLPEIARALDDLAHLASQVK-----DAEVAIDLADLRGYAYHSGAMFAA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  +V  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YV----------DGVPNAVAHGGRYDHVGQAYG-RARPATGFS---------LDLREIAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPVEARGAAILAPWKQDDALRAA---VGALRDAG 347


>gi|121593592|ref|YP_985488.1| class II tRNA synthetase [Acidovorax sp. JS42]
 gi|166219815|sp|A1W587|HISZ_ACISJ RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|120605672|gb|ABM41412.1| tRNA synthetase, class II (G, H, P and S) [Acidovorax sp. JS42]
          Length = 382

 Score = 97.6 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 76/408 (18%), Positives = 141/408 (34%), Gaps = 56/408 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +   +YG++ +  PLLE+ +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLLDTARSYGYELVMPPLLEHLESLLTGTGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQLSGRSLGLRADTTQQVARIDA-HLLNRQGVARLCYCGPVLHTRPDRPHATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     AD E  ++  + L +  ++  +  + + + +I+  +L  + +     
Sbjct: 123 QFGAEIYGHPGIEADIEAVLLSLECLRSAHVQ--EVSVDLADVRIVRSLLAGLPV----- 175

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                             L  V   L           T+     S   + +++ L +  +
Sbjct: 176 --------------GMHQLAQVHGALAAKDASELASLTRDFP--SASREGLLALLQLYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + ++E   L+K      +  ++L  I+  +        R+      +RG  YY+G  + 
Sbjct: 220 AAVLNEAENLLKPFPGAREALSDLRAIAARMD-----GVRVTFDLADLRGYAYYSGARFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                             ++  GGRYD + + F  +N PA GFS+ + +L+  + +    
Sbjct: 275 IYAQ----------GASDALVRGGRYDEVGAVFG-RNRPAAGFSLDVKQLVGVVSAPSLR 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                            D  +LS        LR  G      L    +
Sbjct: 324 AAIRAPW---------GDGGALSAAIA---TLRRQGETVVCVLPGHGS 359


>gi|302878481|ref|YP_003847045.1| histidyl-tRNA synthetase 2 [Gallionella capsiferriformans ES-2]
 gi|302581270|gb|ADL55281.1| histidyl-tRNA synthetase 2 [Gallionella capsiferriformans ES-2]
          Length = 387

 Score = 97.6 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 72/402 (17%), Positives = 134/402 (33%), Gaps = 51/402 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D    E     ++   + ++ +  G+  +  PLLEY +SL   + D    +   
Sbjct: 6   LPEYIQDMLPVEAWRVEKMRAQVLDLLKKSGYQLVAPPLLEYEESLL--IADSADMDLRT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ ++LR D+T  +AR  A +        R    G V      G  R R+ +
Sbjct: 64  FKLVDQLSGRTLALRADITPQVARIDA-HLLNRQGVARLCYAGSVLHTIPAGLNRTRELL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     +D E+  +M   L  +G+     H+ + +  +   +++         
Sbjct: 123 QIGAELYGHGGIESDLEIQQLMLQALALIGV--EQVHLDLGHVGVFRALVQHA------- 173

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                       +L K     +   L    + +    T+  +        ++  L    +
Sbjct: 174 ------------QLSKALENELFAALQSKDSTSLQALTEQLDSVLRSALRVLPTLYGSCD 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +    + +          ++L  +S  +         + I    +RG  Y++G V+ A
Sbjct: 222 EVLARARKSLPDYPEVCAALSDLQTVSVKL---HGAVASVGIDLADLRGYHYHSGMVFAA 278

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            ++  GGRYD L   F  +   ATGFS+ +  L   L +  +  
Sbjct: 279 Y----------HAGSHDAIALGGRYDDLGKSFG-RARAATGFSMDLRLLYRLLPACAAQP 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
                             D           LR AG    + L
Sbjct: 328 GIRAPYL-----------DDADLACEIA-TLRAAGEVVVVSL 357


>gi|124023225|ref|YP_001017532.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus str. MIT 9303]
 gi|166219836|sp|A2C9V7|HISZ_PROM3 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|123963511|gb|ABM78267.1| possible Histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT
           9303]
          Length = 392

 Score = 97.6 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 58/408 (14%), Positives = 130/408 (31%), Gaps = 41/408 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++ +  ++   +  +Y  +G+D +  P +E  ++L          
Sbjct: 1   MALQPAAGARDLNPQQVELNQKLSQRLAEVYRLWGYDEVSPPRVERLETLKAGGA---IA 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +  L     + + LR ++TA +AR           P R +  G +F +     G   
Sbjct: 58  SQDIVRLV--ADEPLGLRPEMTASIARAACTRLRQRPRPLRLWAAGTIFESRTADEGSLC 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                         E  +AEM ++                       +L   +E + L  
Sbjct: 116 IEENLQSGVELFGVEPINAEMELL----------------------SLLFSAVETLELSK 153

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +    +     +D +       ++  +            +   L ++Q + ++  L  
Sbjct: 154 QHQPRLLVGHTALMDLIMLPFQNDLREKIRTALIHYDRLALENLQLPNDQFERLLHHL-- 211

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELV-RKSGYNSNRIKISSTIVRGLEYYTGC 305
           +      ++ E + G    ++  N L  + E +   +      +++  T     E YTG 
Sbjct: 212 ECRGEPLDVLERLSGLFGTQQALNNLQRLFEQMGPLAADQGIDLQLDPTFQPHFELYTGL 271

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V++ +                 +  GGRYD LV+R   + + A G     +   +     
Sbjct: 272 VFQLVCQSDA--------APVVIARGGRYDNLVARCGAKGLQAAGVGFSFAIDDI---RE 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
             +                 D  +L       +     G RA + L +
Sbjct: 321 LLTKEIKASEAVESTLVAYGDQATLEHALKRQRHWHKQGQRAVVELEA 368


>gi|146332667|gb|ABQ22839.1| histidyl-tRNA synthetase-like protein [Callithrix jacchus]
          Length = 123

 Score = 97.6 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 43/118 (36%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R+   ++    +           +         L +       L  AGI+AE+    + 
Sbjct: 1   ERIFSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNP 60

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              NQL+Y +    PL  I G  E   G+++++ +   +E+    ++     + R  Q
Sbjct: 61  KLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 118


>gi|257790832|ref|YP_003181438.1| ATP phosphoribosyltransferase [Eggerthella lenta DSM 2243]
 gi|257474729|gb|ACV55049.1| ATP phosphoribosyltransferase [Eggerthella lenta DSM 2243]
          Length = 554

 Score = 97.6 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 76/336 (22%), Positives = 126/336 (37%), Gaps = 36/336 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +    P GF D  + E  +R RI   ++  +   G+ PIETP LE  D +         P
Sbjct: 1   MDYVTPAGFRDVLSDEACMRERIARDVQACFAARGYLPIETPTLEVMDVMRAGGRMPGSP 60

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR-NEKHGPGRF 125
               F   D  G  +++R D+T  +AR  A        P R   +  VFR  E     + 
Sbjct: 61  ----FKFFDASGDLLAMRPDVTLQVARMCATRLAGQPGPFRFRYMQRVFREAEGRMQAQA 116

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+  Q  V+ +G +   ADAE+  +MA+ LE  G +     +         G+L  +   
Sbjct: 117 REMTQIGVECIGEAGPQADAEVVELMAEALELAGARGCKLALATV------GVLRALLAA 170

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                     VL A    +      V  L GE                      + +   
Sbjct: 171 SGASAQWTERVLAAFHASNFV---EVDRLTGEAAAVPPVFAAA-----------IRALPR 216

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           I   +   E    +   +  E G ++     +L+ ++G  ++RI +  +++   +YYTG 
Sbjct: 217 IRGGREAVEEVRALVAPLGCEDGLDDFARTCDLLAEAG-LADRILVDFSVMSSFDYYTGI 275

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
           V+EA                  +G GGRYD ++  +
Sbjct: 276 VFEAYAPELGT----------PLGSGGRYDNMIGSY 301


>gi|325528643|gb|EGD05731.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia sp.
           TJI49]
          Length = 382

 Score = 97.2 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 135/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLCHAGVLAALL---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D       + +   L         + T      +      +  L  D  
Sbjct: 171 ---------ARDAQAAARGEALYDALSGKDVPLLNELTDDLGADTRAALRALPHLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++   +        + I    +RG  Y++G ++ A
Sbjct: 222 -VLDEARSRLPVLPEITRALDDLAQLAAQAK-----GAEVAIDLADLRGYAYHSGAMFTA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  ++  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YI----------DGVPNAIARGGRYDHVGQAYG-RARPATGFS---------LDLRELAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPVEARGTAILAPWAQDDALQAA---VAALRDAG 347


>gi|296535070|ref|ZP_06897328.1| ATP phosphoribosyltransferase regulatory subunit [Roseomonas
           cervicalis ATCC 49957]
 gi|296264604|gb|EFH10971.1| ATP phosphoribosyltransferase regulatory subunit [Roseomonas
           cervicalis ATCC 49957]
          Length = 223

 Score = 97.2 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 3/150 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    E      +++++  ++  +G++ ++ PLLE+ DSL              
Sbjct: 11  LPSGLTDLLPPEAAHEAALVEAMLAVFAGHGYERVKPPLLEFEDSLLAGSGGA--VADQT 68

Query: 71  FSLQDDDG-QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D D  + + LR D T  +AR  A     +  P R    G V R         RQ  
Sbjct: 69  FRLMDPDSHRMMGLRADTTPQVARIAATRLADVPRPLRLSYAGQVLRIHGSQLAPERQIP 128

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           Q  ++ +G+    ADAE+ ++  + L A+G
Sbjct: 129 QAGIELIGADCPEADAEVALLGVEALAAIG 158


>gi|46200167|ref|YP_005834.1| ATP phosphoribosyltransferase regulatory subunit [Thermus
           thermophilus HB27]
 gi|55980098|ref|YP_143395.1| ATP phosphoribosyltransferase regulatory subunit [Thermus
           thermophilus HB8]
 gi|54037293|sp|P62360|HISZ_THET2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|81364706|sp|Q5SM14|HISZ_THET8 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|46197795|gb|AAS82207.1| histidyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55771511|dbj|BAD69952.1| alternative histidyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 361

 Score = 97.2 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 75/423 (17%), Positives = 152/423 (35%), Gaps = 78/423 (18%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG- 69
           +P G       E R++  ++  +++++  +G++P+E P LE  D         D P    
Sbjct: 2   IPEGTRFLLPPEARLKAEVVGKLQHLFRRHGYEPVELPALELYDP--------DHPLAER 53

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP-GRFRQF 128
            F L D  G+ ++LR + T  LA+ +  +        R    GP++  E     GR R++
Sbjct: 54  AFKLVDKTGEVLALRSEFTTLLAKLLRAHLGE--GAHRFQYAGPLWLREADAELGRLREY 111

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G++   ADAE+  +    LEA+G+      + +    ++  +L+  GL    
Sbjct: 112 TQVGLELLGATGPLADAEVLELAFAALEALGV---QGEVEVGLPSLVGEVLKASGLPEAL 168

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +        RA   + +  L  +K LL E              +  E   ++++   +  
Sbjct: 169 QR-------RAQQAIHRKNLPELKGLLAES------------PVPEEARKVLLALPDLYG 209

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +      ++   +L    +L+         + +   + R  EYY+G  + 
Sbjct: 210 GREVLKEARGLPLPPKAQEALAQLERTLDLL------GRPVLLDLGMARRYEYYSGIFFR 263

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A      +                RYDG +             +     +   L++L   
Sbjct: 264 AYTPGFGLPLLGGG----------RYDGALFPK---------AAGFALGVERLLEALRLP 304

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                      +  +D     L   + + +  R      E+F G        + YA RR 
Sbjct: 305 KEEEPP----EVLALD-----LKALRRFARERR-----TELFHGEDP-----VAYARRRG 345

Query: 429 CPL 431
            P 
Sbjct: 346 IPF 348


>gi|86157690|ref|YP_464475.1| histidyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|109892199|sp|Q2IQF8|HISZ_ANADE RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|85774201|gb|ABC81038.1| histidyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 349

 Score = 97.2 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 5/193 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L   LP G  D           +   + +++  +G+  +  P LE  D + + L      
Sbjct: 2   LDLSLPSGLRDLLPDHSAHLAELSSKLHDVFSRFGYRRVFLPTLERLDVVERGL--SPAA 59

Query: 67  NKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
              V    +   G+ +++R D+T  +AR  A   D +  P R    GPV R  +   GR 
Sbjct: 60  LADVMKFVEPGSGEVVAIRPDITPQIARLYAARPDALPSPARLCYDGPVLRAREARAGRP 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+  Q  V+ +G+   +ADAE  +++A +LE VG+K     + + + +  + ++E   L 
Sbjct: 120 REVYQAGVELLGAGGASADAEALVLLARSLERVGLKAP--RVEVGHARFAEAVMEAARLP 177

Query: 186 GDDKLNERLIVLR 198
              +      + R
Sbjct: 178 QRLRSAAWEALSR 190


>gi|115351791|ref|YP_773630.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           ambifaria AMMD]
 gi|170703305|ref|ZP_02894098.1| tRNA synthetase class II (G H P and S) [Burkholderia ambifaria
           IOP40-10]
 gi|171320455|ref|ZP_02909488.1| tRNA synthetase class II (G H P and S) [Burkholderia ambifaria
           MEX-5]
 gi|122323100|sp|Q0BEX7|HISZ_BURCM RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|115281779|gb|ABI87296.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ambifaria
           AMMD]
 gi|170131787|gb|EDT00322.1| tRNA synthetase class II (G H P and S) [Burkholderia ambifaria
           IOP40-10]
 gi|171094315|gb|EDT39389.1| tRNA synthetase class II (G H P and S) [Burkholderia ambifaria
           MEX-5]
          Length = 382

 Score = 97.2 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 135/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLCHAGVLAALL---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D       + +   L         + T      +      +  L  D  
Sbjct: 171 ---------ARDAQAAERGESLYDALSGKDVPLLNELTDDLGADTRAALRALPHLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++   +        + I    +RG  Y++G ++ A
Sbjct: 222 -VLDEARARLPVLPEITRALDDLAQLAAQAK-----GVEVAIDLADLRGYAYHSGAMFTA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  ++  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YI----------DGVPNAIARGGRYDHVGQAYG-RARPATGFS---------LDLRELAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPIEARGTAILAPWAQDDALGAA---VAALRDAG 347


>gi|328480060|gb|EGF49059.1| histidyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 232

 Score = 97.2 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 59/276 (21%), Positives = 108/276 (39%), Gaps = 52/276 (18%)

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPG 123
            K +++ +D   + ++LR + TA + R   EN         P + Y +GP+FR E+   G
Sbjct: 2   TKEMYTFEDKGDRMMALRPEGTAGVVRAYVENKLYGPEYAKPYKVYYMGPMFRYERPQSG 61

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----INNRKILDGIL 179
           R RQF Q  V+  GS +   DAE   +    LEA+G K   + I        RK     L
Sbjct: 62  RQRQFHQIGVEAFGSDSPVLDAETLALAKQLLEALGAKHLKFVINSLGDPATRKAFHAAL 121

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                   D+L+E        D   +     +++L  + + D                  
Sbjct: 122 VDYLTPFKDELSE--------DSKVRLVKNPLRILDSKDKHDQE---------IVADAPS 164

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++ +L+ + ++    +  L+ G                            ++ +T+VRGL
Sbjct: 165 ILDYLTPEAQQHFDRVKSLLTGL-----------------------GIEFEVDATMVRGL 201

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
           +YY   ++E +      ++K     + ++  GGRY+
Sbjct: 202 DYYNHTIFEVM-----SDDKVFGGGYTTILAGGRYN 232


>gi|302762907|ref|XP_002964875.1| hypothetical protein SELMODRAFT_83492 [Selaginella moellendorffii]
 gi|300167108|gb|EFJ33713.1| hypothetical protein SELMODRAFT_83492 [Selaginella moellendorffii]
          Length = 881

 Score = 97.2 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 69/440 (15%), Positives = 146/440 (33%), Gaps = 39/440 (8%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K +  +  ++   ++++  +G     +P +           D    N+    + +  
Sbjct: 451 LTPKWLTAQELVIGLTKDVFTRHGARKFRSPSM-------TVASDVKTSNRSAVKVINSS 503

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G    LRYD     AR+V  N  T                +  G    ++++Q D D +G
Sbjct: 504 GTMFELRYDTRLLFARWVVLNQSTSWK----RYEISHTYRKGVGYRAPKEYLQGDFDIIG 559

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE----- 192
                A+AE+    AD +  V        + +N+ +ILD I    G+    + N      
Sbjct: 560 GYRALAEAEVIKAAADIISRV-SSTETCELRLNHLEILDTIWSWSGVTRQQRKNVAQILG 618

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF---LSIDLE 249
            +  LR      K     V+ +L            +G +L+   +D + +     + + +
Sbjct: 619 TMTFLRPQSADRKARWVFVRSVL-----------LQGLHLSEAVVDRLQTAERRFTGNAD 667

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +  L   +  + +  +   EL  +   +R        + +   IV    Y+    ++ 
Sbjct: 668 EVLARLRGALSNSPSSIEAIEELSRLLSYLRNW-RVEMLLTVDVFIVPSDYYFNAAYFQI 726

Query: 310 ILGFPVMNEKQKPVVFGSVGG-GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                       P   G +   GGRYD L+          T        + +      + 
Sbjct: 727 YFP-----RTSYPGAQGMLLAVGGRYDLLLEHLAKDYGVHTPPGAVGLTIALQKLIHIAM 781

Query: 369 TNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
            ++  E  P  +          L +       L +A ++A+     + +   Q +YA   
Sbjct: 782 KDSKNETEPAEVLVCCRGGGGLLKERMELADELWSANVKADFVCAIAPSLTEQYEYAHDN 841

Query: 428 NCPLAIIQGTGERSRGMLQI 447
              + +I      S+G++ +
Sbjct: 842 GIKVLVIITESGLSQGVVTV 861


>gi|290580309|ref|YP_003484701.1| putative histidyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254997208|dbj|BAH87809.1| putative histidyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 320

 Score = 97.2 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 132/355 (37%), Gaps = 43/355 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +  LP G  D   K  R+   I   I N+    GF+ IETP LE+ +         D  +
Sbjct: 3   KTSLPVGMHDKLFKRARVMYEIERDISNLLIKQGFNRIETPTLEHFEVFA------DDVS 56

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              + L D  G  +SLR D+T+ + R +A     +  P +    G VF+  +   G   +
Sbjct: 57  SEHYHLFDKKGNLLSLRPDITSQIGRVIAS--TRVETPIKFSYSGKVFKYNEELRGLANE 114

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q  ++ VG   + A  +  +   D L+A G+K  DY    ++  IL  I   + +   
Sbjct: 115 HTQAGIEIVGYKTQDAIKDALLSAKDALKASGLK--DYKFEFSHAHILQTIFANLDIPET 172

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            K                   + +   + +       +FT         +   + FL  +
Sbjct: 173 AK-------------------KDLATFIQDKNVTGLNEFTHCYPSEFNALIRQLPFLFGE 213

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + +  + +           +L  + + +     +   I +    +  + YYTG ++
Sbjct: 214 SHQVLKKARQ-LTNHQTILSALTDLEDLLQELAD---SLAEITLDLAQIASMPYYTGLMF 269

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +               +  +   GGRYD L  RF  + + A G+++ I  +  A+
Sbjct: 270 KVF----------GDKIPDAFVSGGRYDKLFERFGAKELTAIGWALDIDSVYQAI 314


>gi|221054958|ref|XP_002258618.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
 gi|193808687|emb|CAQ39390.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
          Length = 613

 Score = 96.8 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 60/540 (11%), Positives = 149/540 (27%), Gaps = 95/540 (17%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +  RG       +   R  I    + + + + +   + P+LE  +   K          
Sbjct: 59  LKSVRGIRTFNPTDYAKREYIFKKWKELAKAFSYSFYDLPVLEDYNIFQKT------KIN 112

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVA-----------ENFDTIVFPCRTYRIGPVFRN 117
             +     + + + LR ++T  L R++            +  +      +      +  N
Sbjct: 113 EAYDFV-KNKRHLILRPEITPQLVRHLFVREERTHQSGRQEGNEQSEVAKQREDNQICEN 171

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV----------GIKRNDYHI 167
           ++    +        + +   +     +    +    L  +             R +   
Sbjct: 172 DRETIDQEGGGYSSPLQSAVLTNRVQTSARVRIKPYRLHNLRKIHKVSTIGQCFRYERTS 231

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVL-RAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
               R+     ++ IG    D   E L +L     ++       V  +  +         
Sbjct: 232 NCRKREHYQWNMDIIGTDLIDADIEILTILISFFRRVHLLPSDVVIKINDKRIVSYMIKK 291

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG------------------------- 261
              ++L       +   +  ++  ++ +  ++  G                         
Sbjct: 292 IFKSSLREFSHPYIQQHVLKNILHNLDKYKKISSGIFKFFIQRKMPYLQRHEVTNFFNII 351

Query: 262 --------------TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                         +   ++ F++L  +    ++   N    ++  TIVRG++YYT  ++
Sbjct: 352 GKIKNLPDLATFFYSPGEQEIFSDLHNVLNYFQQMNLNR-YFELDLTIVRGMDYYTNIIF 410

Query: 308 EAILGFP-------------VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           E+                  V+NE Q+    G   G      ++   + ++      ++ 
Sbjct: 411 ESFYRHKEYRAICGGGRYSYVLNEGQRVCAVGFGMGDVVITEILFNNQERHGGNGPGNLA 470

Query: 355 ISRLIVA------LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
                            +        + P    T         ++      LR  G+R  
Sbjct: 471 DEFYKNVDVVSFSPSRAQHQPRQKHSVHPTHTHTQKEQVHIQKEHFHIVDTLRRNGVRVY 530

Query: 409 MFL--GSSKNFGNQLKYADRRNCPLAIIQGT-GERSRGMLQIKDLAKGKELSREIKNNES 465
             L   ++ +    LK A+              E       +KDL  G + +   ++  S
Sbjct: 531 SLLQGSNNNSLSKALKKANSLRANFFFFFDEHSEL----FILKDLRTGGQHAVTPEDVLS 586


>gi|89901075|ref|YP_523546.1| class II tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|109892447|sp|Q21W38|HISZ_RHOFD RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|89345812|gb|ABD70015.1| tRNA synthetase, class II (G, H, P and S) [Rhodoferax ferrireducens
           T118]
          Length = 382

 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 78/396 (19%), Positives = 137/396 (34%), Gaps = 56/396 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +  S+ +    YG++ +  PLLE+ +SL              
Sbjct: 6   LPDHIADVLPSEARHIEELRRSLLDTARCYGYELVMPPLLEHLESLLTGAGAALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQLSGRMMGLRADSTPQVARIDA-HLLNRPGVTRLCYCGPVLHTRPGAPHASREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+ M+  D L+ V  K     + + + +I+  +L+   +  +  
Sbjct: 123 QFGAEIYGHAGLEADLEILMLALDCLKVV--KVASPSVDLADARIVHALLKG--VPVEIA 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL- 248
           L E++    A                     D S          S     +++ + +   
Sbjct: 179 LAEQIYAALA-------------------AKDASELAVLTKKFPSSSRQGLLALVQLYGD 219

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           EK + E  + ++   A  +  + L  ++  +        ++      +RG  YYTG  + 
Sbjct: 220 EKVLLEAEKALQPLPAITESLSNLKWLASQLD-----GAKVSFDLADLRGYAYYTGTRFS 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                             ++  GGRYD + + F  +N PA GFS+ +  L+  L +    
Sbjct: 275 IYAA----------GASDALVRGGRYDEVGAVFG-RNRPAAGFSLDVKALVGVLPARPLR 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                              ++          LR  G
Sbjct: 324 AAIRAPWR-----------EAADLRVAIAS-LRAQG 347


>gi|239610069|gb|EEQ87056.1| protein kinase [Ajellomyces dermatitidis ER-3]
          Length = 1567

 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 79/482 (16%), Positives = 162/482 (33%), Gaps = 55/482 (11%)

Query: 13   RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            RG    P  E+ +++ + + + +I+  +G   +ET     S    +     +    GV  
Sbjct: 961  RGTP--PAAEVLLQSLVKEKLTSIFRKHGA--VET---TRSSLFPRS----EHYPPGVVR 1009

Query: 73   LQDDDGQWISLRYDLTAPLARYV--AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            L D  G  + L YDLT P AR V   ++    +F   T     +      G       + 
Sbjct: 1010 LLDPAGNLVQLPYDLTLPNARSVPRLDSSIEKIFTFGTAYRESIHGGAPRGHREVDFDMI 1069

Query: 131  CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                   +  E    ++   + +   ++  +       IN+  +LD I+    +    K 
Sbjct: 1070 SHNTLDLALKEAEVIKVLDEILNEFPSL--RSAPMCFHINHSDLLDAIMSFCRISPQQKP 1127

Query: 191  NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
              + ++ +    +  + +Q ++  L           +    + S  +D +  F   D   
Sbjct: 1128 LVKEVISKL--NIGPYSMQKIRSELR----------SPTIGVASTSVDDLARFDFRDSP- 1174

Query: 251  SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK-ISSTIVRGLEYYTGCVYEA 309
               +  + ++  + G +  + L  I   +          +      V  L       +  
Sbjct: 1175 --DKALKRLRTIMEGTEFADRLAPIFARLNAVVSYLKGFRVKRKIYVNPLSSLNDKFFRG 1232

Query: 310  ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFSIGISRLIV--- 360
             + F  +++ ++  VF     GGRYD L+  F            A GF++G  +L +   
Sbjct: 1233 SVLFQCVSDTKRRDVF---AAGGRYDSLIQEFHPKVLYSGNQRHAVGFNLGWEKLCLSMS 1289

Query: 361  ---------ALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMF 410
                      LK  E+  + I       +     D+    +      Q L    I AE+ 
Sbjct: 1290 NYLKGSNKAFLKQGEAEISGIWRARRCDVLVASFDATVLRTVGVGVVQDLWAHEISAELS 1349

Query: 411  LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            + +S +    L      N    +I       RG L++K+++  +E          W  + 
Sbjct: 1350 VDAS-SLEEILARYKNDNHSWVVIVKQDSMDRG-LKVKNISTKEEFEVRSSELAGWLRSE 1407

Query: 471  VA 472
            + 
Sbjct: 1408 IG 1409


>gi|261198513|ref|XP_002625658.1| protein kinase [Ajellomyces dermatitidis SLH14081]
 gi|239594810|gb|EEQ77391.1| protein kinase [Ajellomyces dermatitidis SLH14081]
          Length = 1557

 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 79/482 (16%), Positives = 162/482 (33%), Gaps = 55/482 (11%)

Query: 13   RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            RG    P  E+ +++ + + + +I+  +G   +ET     S    +     +    GV  
Sbjct: 951  RGTP--PAAEVLLQSLVKEKLTSIFRKHGA--VET---TRSSLFPRS----EHYPPGVVR 999

Query: 73   LQDDDGQWISLRYDLTAPLARYV--AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            L D  G  + L YDLT P AR V   ++    +F   T     +      G       + 
Sbjct: 1000 LLDPAGNLVQLPYDLTLPNARSVPRLDSSIEKIFTFGTVYRESIHGGAPRGHREVDFDMI 1059

Query: 131  CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                   +  E    ++   + +   ++  +       IN+  +LD I+    +    K 
Sbjct: 1060 SHNTLDLALKEAEVIKVLDEILNEFPSL--RSAPMCFHINHSDLLDAIMSFCRISSQQKP 1117

Query: 191  NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
              + ++ +    +  + +Q ++  L           +    + S  +D +  F   D   
Sbjct: 1118 LVKEVISKL--NIGPYSMQKIRSELR----------SPTVGVASTSVDDLARFDFRDSP- 1164

Query: 251  SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK-ISSTIVRGLEYYTGCVYEA 309
               +  + ++  + G +  + L  I   +          +      V  L       +  
Sbjct: 1165 --DKALKRLRTIMEGTEFADRLAPIFARLNAVVSYLKGFRVKRKIYVNPLSSLNDKFFRG 1222

Query: 310  ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFSIGISRLIV--- 360
             + F  +++ ++  VF     GGRYD L+  F            A GF++G  +L +   
Sbjct: 1223 SVLFQCVSDTKRRDVF---AAGGRYDSLIQEFHPKVLYSGNQRHAVGFNLGWEKLCLSMS 1279

Query: 361  ---------ALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMF 410
                      LK  E+  + I       +     D+    +      Q L    I AE+ 
Sbjct: 1280 NYLKGSNKAFLKQGEAEISGIWRARRCDVLVASFDATVLRTVGVGVVQDLWAHEISAELS 1339

Query: 411  LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            + +S +    L      N    +I       RG L++K+++  +E          W  + 
Sbjct: 1340 VDAS-SLEEILARYKNDNHSWVVIVKQDSMDRG-LKVKNISTKEEFEVRSSELAGWLRSE 1397

Query: 471  VA 472
            + 
Sbjct: 1398 IG 1399


>gi|126666955|ref|ZP_01737931.1| ATP phosphoribosyltransferase regulatory subunit [Marinobacter sp.
           ELB17]
 gi|126628671|gb|EAZ99292.1| ATP phosphoribosyltransferase regulatory subunit [Marinobacter sp.
           ELB17]
          Length = 393

 Score = 96.8 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 74/372 (19%), Positives = 139/372 (37%), Gaps = 42/372 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D           +  +I ++ +++G+  +  PL+EY +SL      +       
Sbjct: 9   LPDGVEDILPPLAGQIESLRRNIMDVCQHWGYQLVIPPLIEYLESLFTGTGHDLEL--QT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T   AR  A +        R   +G V           R  I
Sbjct: 67  FKLTDQLTGRMMGVRADMTPQAARIDA-HTLAEEGITRLCYVGHVLHTRPRHMLTGRTPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  GSS+E+AD E+  +  + L   G+      +           +        D 
Sbjct: 126 QAGCELFGSSSESADMEIISLALEALSVAGLPAIHMDL---------AHVAIYQNLIADA 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +R       D + +  L  + +LLG+   D++G   +     S               
Sbjct: 177 GFDRDTEAAVFDAMGRKSLPELNVLLGDEAADSAGGRLRRLAAVS------------GGR 224

Query: 250 KSMHELYELV-KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +++ +  ++V   +   +   ++L  +++ + +  +   R+      +RG  Y+TG V+ 
Sbjct: 225 EALDQARDIVQGASAELDAALDQLGRVADTLSQQ-FPGLRLGFDFCELRGYNYHTGLVFA 283

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +          P    +V  GGRYD + S     +   +  + G S  I AL +L SS
Sbjct: 284 AYV----------PGHGDAVAKGGRYDAIGS-----DFGRSRPATGFSLDIRALVALGSS 328

Query: 369 TNNIKEMGPVLI 380
           T   +      +
Sbjct: 329 TVPAQGAIWAPV 340


>gi|148239576|ref|YP_001224963.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           WH 7803]
 gi|166219845|sp|A5GL51|HISZ_SYNPW RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|147848115|emb|CAK23666.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           WH 7803]
          Length = 392

 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 47/402 (11%), Positives = 126/402 (31%), Gaps = 23/402 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   ++++  + + +++  +Y  +G++ +  P +E  D+L          
Sbjct: 1   MALQPASGVRDLNPQQVQRNHELREALAAVYRLWGYEEVAPPRIERMDTLKAGGA---ID 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +  L     + + LR ++TA +AR     F     P R +  G VF   +   G   
Sbjct: 58  SRDIVRLV--ADEPLGLRPEMTASIARAACTRFQNRRRPLRLWSHGTVFEGRQADEGGLC 115

Query: 127 QFIQCDVDNVGS--SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
              +              A+ E+  ++  + +A+ +  ++    +     L  +L  +  
Sbjct: 116 IEEKLHCGVELFGARGVEAELELLSLLMASFKALALPLSEPPQLLIGHTGLMQLL--LKN 173

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVS- 242
             +         L  +D+L       ++ L+  + +  +   +          I  +   
Sbjct: 174 VDEQDHPAYRNCLTQLDRL------ALRELINTQPQHAHLQQWLDRRGAPDAVISQLKDA 227

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           F    + + +  L   +           +L    + +           +       +   
Sbjct: 228 FPDAPVLQQLTRLINHLSPLAETTGISLQLDPTFQPMYALYDGIVFQLVCRGTSSPVVVA 287

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
            G  Y+ ++       K      G          L   F           +  S+     
Sbjct: 288 RGGRYDTVVQRLGARGKDATG-LGFSFCVDDLRDLPGAFAMTTSRTDRILLCYSQNSSME 346

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
           ++L++     +      +     ++ + ++     + LR AG
Sbjct: 347 QALQAQAGLHRRGLSCQVDHHPCETKAEAE-----ERLREAG 383


>gi|327350991|gb|EGE79848.1| protein kinase [Ajellomyces dermatitidis ATCC 18188]
          Length = 1583

 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 79/482 (16%), Positives = 162/482 (33%), Gaps = 55/482 (11%)

Query: 13   RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            RG    P  E+ +++ + + + +I+  +G   +ET     S    +     +    GV  
Sbjct: 977  RGTP--PAAEVLLQSLVKEKLTSIFRKHGA--VET---TRSSLFPRS----EHYPPGVVR 1025

Query: 73   LQDDDGQWISLRYDLTAPLARYV--AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            L D  G  + L YDLT P AR V   ++    +F   T     +      G       + 
Sbjct: 1026 LLDPAGNLVQLPYDLTLPNARSVPRLDSSIEKIFTFGTAYRESIHGGAPRGHREVDFDMI 1085

Query: 131  CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                   +  E    ++   + +   ++  +       IN+  +LD I+    +    K 
Sbjct: 1086 SHNTLDLALKEAEVIKVLDEILNEFPSL--RSAPMCFHINHSDLLDAIMSFCRISPQQKP 1143

Query: 191  NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
              + ++ +    +  + +Q ++  L           +    + S  +D +  F   D   
Sbjct: 1144 LVKEVISKL--NIGPYSMQKIRSELR----------SPTIGVASTSVDDLARFDFRDSP- 1190

Query: 251  SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK-ISSTIVRGLEYYTGCVYEA 309
               +  + ++  + G +  + L  I   +          +      V  L       +  
Sbjct: 1191 --DKALKRLRTIMEGTEFADRLAPIFARLNAVVSYLKGFRVKRKIYVNPLSSLNDKFFRG 1248

Query: 310  ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFSIGISRLIV--- 360
             + F  +++ ++  VF     GGRYD L+  F            A GF++G  +L +   
Sbjct: 1249 SVLFQCVSDTKRRDVF---AAGGRYDSLIQEFHPKVLYSGNQRHAVGFNLGWEKLCLSMS 1305

Query: 361  ---------ALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMF 410
                      LK  E+  + I       +     D+    +      Q L    I AE+ 
Sbjct: 1306 NYLKGSNKAFLKQGEAEISGIWRARRCDVLVASFDATVLRTVGVGVVQDLWAHEISAELS 1365

Query: 411  LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            + +S +    L      N    +I       RG L++K+++  +E          W  + 
Sbjct: 1366 VDAS-SLEEILARYKNDNHSWVVIVKQDSMDRG-LKVKNISTKEEFEVRSSELAGWLRSE 1423

Query: 471  VA 472
            + 
Sbjct: 1424 IG 1425


>gi|320449726|ref|YP_004201822.1| ATP phosphoribosyltransferase, regulatory subunit [Thermus
           scotoductus SA-01]
 gi|320149895|gb|ADW21273.1| ATP phosphoribosyltransferase, regulatory subunit [Thermus
           scotoductus SA-01]
          Length = 361

 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 68/422 (16%), Positives = 146/422 (34%), Gaps = 76/422 (18%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G       E R++  ++  +R+++  +G++P+E P LE  D                
Sbjct: 2   IPEGTRFLLPPEARLKAELMARLRDLFLRHGYEPVELPALEVYDPSHPLAERA------- 54

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           F L D  G+ ++LR + T  LA+ +  +    V   +      +   +    GR+R++ Q
Sbjct: 55  FKLVDKTGEVLALRSEFTTLLAKLLRPHLGEGVARFQYAGALWLREGDA-ELGRYREYTQ 113

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G++   ADAE+  ++   LEA+G+   +  + +    ++  +L+  GL  + + 
Sbjct: 114 VGLELIGATGPLADAEILSLVFAALEALGL---EGEVEVGLPSLVGEVLKASGLPEEARK 170

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
             +  + R                          +      ++ E    +++   +    
Sbjct: 171 EAQRAIHR-------------------KNLPELTELLSRHPVSPEARRTLLALPDLYGGM 211

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +    + +       K   +L    EL+ +       + +   + R  EYY+G  + A 
Sbjct: 212 EVLAEAKSLPLPERARKALEDLEKTLELLER------PVLLDLGMTRRYEYYSGVFFRAY 265

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                +                RYDG +             +     +  AL++L+    
Sbjct: 266 TPGFGLPLLGGG----------RYDGALLP---------RAAGFAMGVERALEALKLPR- 305

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQML-RTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                       +D   + L+      +   R    R E+F G        + YA  R  
Sbjct: 306 ------------VDVSPEVLALDLKALRRFAREK--RVELFHGEDP-----VAYAKARGI 346

Query: 430 PL 431
           P 
Sbjct: 347 PY 348


>gi|88808578|ref|ZP_01124088.1| tRNA synthetase, class-II (G, H, P and S) [Synechococcus sp. WH
           7805]
 gi|88787566|gb|EAR18723.1| tRNA synthetase, class-II (G, H, P and S) [Synechococcus sp. WH
           7805]
          Length = 392

 Score = 96.8 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 63/408 (15%), Positives = 137/408 (33%), Gaps = 43/408 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   ++++  + + +++  ++  +G++ +  P +E  D+L          
Sbjct: 1   MALQPASGVRDLNPQQVQRNHELRETLAEVFRLWGYEEVSPPRVERMDTLKAGGA---ID 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +  L     + + LR ++TA +AR     F     P R +  G VF   +   G   
Sbjct: 58  SRDIVRLV--ADEPLGLRPEMTASIARAACTRFQDRQRPLRLWSHGTVFEGRQADEGGLC 115

Query: 127 QFI--QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
                 C V+  G+S + A+ E+  ++  +L+A+ +  ND    +     L  +L     
Sbjct: 116 IEENLHCGVELFGASGDEAELELLTLLMASLKALRLPLNDPPRLLIGHTGLMQLL----- 170

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                L +    L+   +     L  ++L              +  +     + ++    
Sbjct: 171 -----LRDVEPHLQQAFRGCLTRLDRLELQELLKGQPQHAHLLQWLDRRGSPVGVIKQLQ 225

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +  E  + +    +   ++                        +++  T     E Y G
Sbjct: 226 DVFPEAPVLKQLSRLVAHLSPLA---------------EETGVGLQLDPTFQPTYELYDG 270

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V++ +                 V  GGRYD +V R   Q   ATG        +  L+ 
Sbjct: 271 VVFQLVCRGVSSP--------VVVARGGRYDTVVQRLGAQGKDATGLGFSF--CVDDLRD 320

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           L     +I+   P  I      + S+ K           G+  ++   
Sbjct: 321 LPG-AFSIQAGKPERILLCYAQNQSMEKALQVQAEWHRKGLSCQVDHH 367


>gi|294668506|ref|ZP_06733603.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria
           elongata subsp. glycolytica ATCC 29315]
 gi|291309469|gb|EFE50712.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria
           elongata subsp. glycolytica ATCC 29315]
          Length = 384

 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 76/420 (18%), Positives = 135/420 (32%), Gaps = 59/420 (14%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++ ++G++ +  PL+EYSDSL   +      +  
Sbjct: 6   QLPEYIADILPSGARQLESAKEKLLALFRSHGYELVHPPLMEYSDSLLIHIDSG--LSLK 63

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
                D   G+ + +R D+T  +AR  A          R    G V      G    R+ 
Sbjct: 64  TIRFVDQISGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGSVLHARPEGFLNSREP 123

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +   AD E+  +M D+L        D  + + +  +   +     L    
Sbjct: 124 LQAGAELYGFAGIAADIEIIGLMLDSLALADF--GDVLLSLGHIGVFRALAASAELSPQQ 181

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK        V+    +G    +                         
Sbjct: 182 AETLLAMM---QDKNVAAVRGQVEAWALDGMWRKAFSLLPTL---------------YGG 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +  E +       K  +EL  + +      +    + I    +R   Y+TG +Y 
Sbjct: 224 REILAQAREKLPDLSLIGKALDELEAVCQ-----AFPQQAVHIDLAELRVDNYHTGLLYA 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  ++ PATGFS  + + +  L      
Sbjct: 279 AYGSD----------GHDAVARGGRYDGLGGYFG-RSRPATGFSFDLRKFLGRLPQGGRR 327

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG--------SSKNFGNQ 420
           T                 +D+    +   + LR  G    +  G         S+    Q
Sbjct: 328 T-----------AIAVALADTADAAEEIAR-LRAEGETVVVDYGMEANSTRDGSRRLLKQ 375


>gi|172060762|ref|YP_001808414.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           ambifaria MC40-6]
 gi|229822706|sp|B1YR34|HISZ_BURA4 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|171993279|gb|ACB64198.1| tRNA synthetase class II (G H P and S) [Burkholderia ambifaria
           MC40-6]
          Length = 382

 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 80/395 (20%), Positives = 136/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L +     +  
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLCHAGVLAALLARDPQAAER- 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L    +  +  L  +   D         +L  +              
Sbjct: 180 ------GESLYDALSGKDVPLLNELTDDLGADTRAALCALPHLYGDA------------- 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++   +        + I    +RG  Y++G ++ A
Sbjct: 221 SVLDEARARLPVLPEITRALDDLAQLAAQAK-----GVEVAIDLADLRGYAYHSGAMFTA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  ++  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YI----------DGVPNAIARGGRYDHVGQAYG-RARPATGFS---------LDLRELAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPIEARGTAILAPWAQDDALGAA---VAALRDAG 347


>gi|113954341|ref|YP_730602.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           CC9311]
 gi|113881692|gb|ABI46650.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           CC9311]
          Length = 409

 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 64/413 (15%), Positives = 128/413 (30%), Gaps = 45/413 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   K+++    + + +  +Y ++G+D +  P +E  D+L          
Sbjct: 18  MALQPATGARDLNPKQVQQNQYLREQLATVYRHWGYDEVSPPQVERLDTLIAGGA---IA 74

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  V  L       + LR ++TA +AR  +        P R    G +F +     G   
Sbjct: 75  SHDVVRLV--ADDPLGLRPEMTASIARAASTRLKDRPRPLRLCACGTIFESRTAEEGGLC 132

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              +                                 D    +    +L   +  + L G
Sbjct: 133 IEEKLHSGVELFG----------------------VKDLAAELELLTLLLEAMNALSLLG 170

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + +    +     ++ +     Q ++  +            +   L +  ++ +V+ L  
Sbjct: 171 EHQPQLLIGHTSLMELVLAPFEQPIREEIRSCLIQYDRLGLEAMGLEAADLNRLVNLL-- 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGC 305
           D   +   + EL+  +   +     L  +   +       +  +++  T     + Y G 
Sbjct: 229 DCRGTPMTILELLGESFGSQPVLTALKRLFVHLSPLAEKQSLALQLDPTFHPHHQLYDGL 288

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V++ +                 +  GGRYDGLV R     V A G           L  +
Sbjct: 289 VFQLVCQGVS--------APVVIARGGRYDGLVERCGESEVNAGGVGFSFC-----LDDI 335

Query: 366 ESSTNNIKEMGPV--LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                +  E   V   I     D  SL K  +        G  A+  L S +N
Sbjct: 336 RDLPGSNTEDVKVDSRILICWSDDSSLEKALLKQTHWHAQGNIAQCDLKSCRN 388


>gi|88798923|ref|ZP_01114505.1| tRNA synthetase, class II (G, H, P and S) [Reinekea sp. MED297]
 gi|88778403|gb|EAR09596.1| tRNA synthetase, class II (G, H, P and S) [Reinekea sp. MED297]
          Length = 398

 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 75/430 (17%), Positives = 144/430 (33%), Gaps = 57/430 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R +LP G  +    +      +  S+ + Y  +G+D ++ P+ EY +SL   +  +    
Sbjct: 6   RWQLPDGIEEILPPQAARIEALRRSLLDEYRAWGYDLLQPPMAEYLESLLTGVGHDLDL- 64

Query: 68  KGVFSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              F + D   G+ + +  D T  +AR  A +        R     PV           R
Sbjct: 65  -LTFKITDQQTGRMMGVSADRTQQVARMDA-HSMPKAGVARYCYCDPVLHTRATHLLSSR 122

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
             IQ   +  G     ++ E+  +M  +LE  G+   D  + + +  I   ++ +  L+ 
Sbjct: 123 SPIQIGAELYGYGGIESEVEIVALMLRSLEKAGL--EDITLDLGHVAIYHALVNETTLNA 180

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + +                     +  LL +        +   ++L+ +  D+     S+
Sbjct: 181 EQRA-------------------ELYSLLRQRALPELSAWLNASDLSPQMRDVFRKLPSM 221

Query: 247 --DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
              L++      +L   T         L  I+E + +  Y S R+ +    +R   Y++G
Sbjct: 222 AGSLKQLADWQQQLSSVTDQVTDALTTLRTIAEQIEQR-YPSVRVHLDLAELRDFNYHSG 280

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+ A +          P     V  GGRYD     F       +  + G S  +  L S
Sbjct: 281 LVFSAFV----------PGFGQPVARGGRYDHTGEVF-----GRSRPATGFSSDLKVLAS 325

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
              +         V        ++  +  Q   + LR  G R                + 
Sbjct: 326 QTVAQWGESPGILVP-------ANPDAALQAVVEQLRARGERVIQLFSDQ-------DHV 371

Query: 425 DRRNCPLAII 434
           D   C   ++
Sbjct: 372 DELGCDRVLV 381


>gi|238926724|ref|ZP_04658484.1| proline--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885256|gb|EEQ48894.1| proline--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 570

 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 62/514 (12%), Positives = 130/514 (25%), Gaps = 76/514 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I   IR   +  G   I  P+L+ S+ L +           +  +
Sbjct: 38  GMYTYLPLAWRTIRKIEQIIREEMDAAGGQEIMMPILQPSE-LWEESGRWGAYGAEMIRV 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR------IGPVFRNEKHGPGR 124
           +D  G+   +     ++   L R    ++  +       +        P F   +     
Sbjct: 97  KDRHGREFCMGPTHEEMITALVRDEVRSYKQLPLMLYQIQDKFRDERRPRFGVMRSREFI 156

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            +     D D  G +       +      T   +  +  +   G       +        
Sbjct: 157 MKDLYSFDKDIAGMNESYRKMSVAYTNIFTRCGLNFRAVEADSGAIGGGHSEEFTVLAPE 216

Query: 185 HGDDKLNERLIVLRAIDKL----DKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI- 239
                         A D+             +L L +  T ++      A      ++  
Sbjct: 217 GESRIACCDACSYAASDEKAALRPINAPDEAELPLAKVATPHTSTIALLAEYLKIPVEKT 276

Query: 240 -------------MVSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
                        +++FL  D E    K ++ +    +  +A E+    +      +   
Sbjct: 277 IKAVAYQTEDDVLILAFLRGDHEVNEIKLVNAVPGARELRMADEEAIRAVGGCPGFMSPI 336

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF----------------- 325
           G       +       +        EA   +  +N K+                      
Sbjct: 337 GIKKGTHIVVDETAMRMHNAVSGANEADFHYTNVNPKRDFGAVTVADIRLVEEGDACPVC 396

Query: 326 --------------GSVGGGGRYDGLVSRFK------GQNVPATGFSIGISRLIVALKSL 365
                              G +Y   +           Q +    + IG+ R + A    
Sbjct: 397 ENGHLHIGRGIEAGQIFALGTKYSKAMGATFLDEAGKTQPLQMGCYGIGVGRTMAAAIEQ 456

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                       I     V++       + L+  +   + LR AG+   +     +  G 
Sbjct: 457 NHDEHGIIWPRAIAPYEVVVVAVNAKAEEQLAYAEEVYEELRAAGVDVLLDDRRERA-GV 515

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +    D    P+ I  G      G +++K    G
Sbjct: 516 KFNDCDLIGYPVRIAIGPKTIENGTIEVKIRKSG 549


>gi|311105369|ref|YP_003978222.1| ATP phosphoribosyltransferase regulatory subunit [Achromobacter
           xylosoxidans A8]
 gi|310760058|gb|ADP15507.1| ATP phosphoribosyltransferase regulatory subunit [Achromobacter
           xylosoxidans A8]
          Length = 385

 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 76/406 (18%), Positives = 138/406 (33%), Gaps = 56/406 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + ++Y  YGF+ +  PL+EY DSL      +       
Sbjct: 6   LPESLADVLPAEARRIEELRRELLDLYRTYGFELVAPPLVEYIDSLLSGTGSDLDLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + +R D+T  + R  A +        R    G V           R+ +
Sbjct: 64  CKLVDQLSGRTLGVRADMTPQVTRIDA-HLLNRAGVTRLCYCGNVLHARPADLLSSRELL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  ++ +T+   G++  +  + + +  +L  +LE         
Sbjct: 123 QIGAEIYGHAGFEADLEIIQLVLETVAIAGVR--NPRLDLCHPGVLRALLES-------- 172

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA-NLTSEQIDIMVSFLSID- 247
                      D       Q V LL+ E      G+  + A  L +E +  +     +  
Sbjct: 173 -----------DPAAAALSQDVILLMREKDVPGLGELAERAPGLRTETLKALQLLPKLYG 221

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + E    +          + L ++ +        +    +    V G  Y++G  +
Sbjct: 222 GPEVLKEARRELPLLPGVVAALDALQLVVD-----AMPNVAFGVDLADVGGYGYHSGVKF 276

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                              ++  GGRYD +   F  +  PATGFS+ + +L   L   E 
Sbjct: 277 ALYAE----------GWRDALVSGGRYDDVSRAFG-RARPATGFSLDLRKLAAGLPPAER 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLG 412
           +       G                     + LR +G I  ++  G
Sbjct: 326 ARAVRAPWGQA------------PALTEAVRRLRRSGEIVVQVLPG 359


>gi|253996266|ref|YP_003048330.1| histidyl-tRNA synthetase 2 [Methylotenera mobilis JLW8]
 gi|253982945|gb|ACT47803.1| histidyl-tRNA synthetase 2 [Methylotenera mobilis JLW8]
          Length = 387

 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 71/406 (17%), Positives = 145/406 (35%), Gaps = 54/406 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D    E      +   + ++++ +G+  +  P+LEY +SL      +       
Sbjct: 6   LPEYIEDVLPAEALRIEVLRRKLLDLFKVHGYQYVIPPMLEYMESLITGAGHDLDL--AT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T   AR  A +        R    G V R +  G    R+ +
Sbjct: 64  FKVVDQLTGRLMGVRADMTPQAARIDA-HLLNHQGVTRLCYAGSVLRTKPDGLALTREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   +D E+  ++   L+A+G   ++ H+  ++  +   ++E   +    +
Sbjct: 123 QIGAELYGHAGIESDIEIQRLLIKALQAIG--IDEIHLDFSHVNVFGSLIETSNVDAQLE 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
            +    +                        D          L     + ++    ++ +
Sbjct: 181 QDLYAALQS---------------------KDQPAVAALTKALDHATREALLHLTELNGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +S + +  +++  T A +K    L  +S  + + G     +    + +RG  Y++G V+ 
Sbjct: 220 QSILAKASQVLPATPAIKKALESLQQVSSAIDQLG---ASVSFDLSELRGYHYHSGIVFA 276

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                G +  GGRYD +   F  +  PATGFS+ +  ++ AL      
Sbjct: 277 AYA----------KCYKGPLALGGRYDEVGQSFG-RARPATGFSLDLRGVVSAL------ 319

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
                +    +   +  D             LR  G      L S+
Sbjct: 320 --PPAQSNMAIYAPVSADPAL---ANKIAS-LRNEGRVVIEALDSA 359


>gi|24379693|ref|NP_721648.1| putative histidyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|46395858|sp|Q8DTQ5|HISZ_STRMU RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|24377650|gb|AAN58954.1|AE014962_10 putative histidyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 320

 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 134/355 (37%), Gaps = 43/355 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +  LP G  D   K  R+   I   I N+    GF+ IETP LE+ +         D  +
Sbjct: 3   KTSLPVGMHDKLFKRARVMYEIERDISNLLIKQGFNRIETPTLEHFEVFA------DDVS 56

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              + L D  G  +SLR D+T+ + R +A     +  P +    G VF+  +   G   +
Sbjct: 57  SEHYHLFDKKGNLLSLRPDITSQIGRVIAS--TRVETPIKFSYSGKVFKYNEELRGLANE 114

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q  ++ VG   + A  +  +   D L+A G+K  DY    ++  IL  I   + +   
Sbjct: 115 HTQAGIEIVGYKTQDAIKDALLSAKDALKASGLK--DYKFEFSHAHILQTIFANLDIPET 172

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            K                   + +   + +       +FT         +   + FL  +
Sbjct: 173 AK-------------------KELTTFIQDKNITGLNEFTHRYPSEFNALIRQLPFLFGE 213

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + +  + +           +L    +L+++   +   I +    +  + YYTG ++
Sbjct: 214 SHQVLKKARQ-LTNHQTILSALTDLE---DLLQELAVSLAEITLDLAQIASMPYYTGLMF 269

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +               +  +   GGRYD L  RF  + + A G+++ I  +  A+
Sbjct: 270 KVF----------GDKIPDAFVSGGRYDKLFERFGAKELTAIGWALDIDSVYQAI 314


>gi|254283395|ref|ZP_04958363.1| ATP phosphoribosyltransferase, regulatory subunit [gamma
           proteobacterium NOR51-B]
 gi|219679598|gb|EED35947.1| ATP phosphoribosyltransferase, regulatory subunit [gamma
           proteobacterium NOR51-B]
          Length = 396

 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 138/398 (34%), Gaps = 44/398 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +   +       +  S+ +   ++G+  +  PL+E++DSL   L  +       
Sbjct: 9   LPDGIDELLPERAATVEALRRSLLDTCASWGYQYVIPPLVEFTDSLLVGLGADLDV--LT 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
               D   G+ + +R D+T  +AR  A +        R    G    +        R  I
Sbjct: 67  CKFTDQLSGRTLGVRADITPQVARIDA-HSMPHDAVTRLCYTGSTLHSTAQSVMSGRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M   L A  +  + +     +   + G+ + +     D 
Sbjct: 126 QLGAECFGCADLDADLEVIELMLSLLGAAPLLLSQHRALTFDIGHI-GVYQALMA---DA 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +     D L +     +   L     D +      A+L                 
Sbjct: 182 ALGEDVEQAVFDALQRKSAPDLAEALSRCTADAAASIQSLADL-------------HGGV 228

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +  EL+  + A     +++  +   V K  +    I +    +RG  Y+TG V+ A
Sbjct: 229 DVLPQARELLSRSPAALAALDQVDSVVARVSKQ-FPGLAIYVDLAELRGFRYHTGLVFAA 287

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            L            +  +V  GGRYD + + F  ++ PATGF+I +  L  A        
Sbjct: 288 YLS----------GIGAAVAKGGRYDNVGAVFG-RSRPATGFAIDVKALAAA-------- 328

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            +       ++       ++LS+       LR  G   
Sbjct: 329 VDGATSSGQVVLAPSAGDEALSQAI---DQLRGEGHTV 363


>gi|194476647|ref|YP_002048826.1| Histidine--tRNA ligase [Paulinella chromatophora]
 gi|171191654|gb|ACB42616.1| Histidine--tRNA ligase [Paulinella chromatophora]
          Length = 392

 Score = 96.1 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 70/426 (16%), Positives = 142/426 (33%), Gaps = 45/426 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP-DEDR 65
           +  +   G  D   +++ I +R+ + +  +Y+ +G+  +  P +E   +L      + + 
Sbjct: 1   MALQPAAGSRDLNPQQVEINHRLCEKLAAVYKLWGYQEVSPPRVERLATLLAGGAIEPEA 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK--HGPG 123
             + V        + ++LR ++TA +AR         + P R +  G  F+      G  
Sbjct: 61  VVQLV------ANEALALRPEMTASIARAACTRMAGKMRPLRLWSTGTTFQGRIGYSGGL 114

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R  + +Q  V+ +G     AD E+  ++  +   +              +    +L    
Sbjct: 115 RIEETLQNGVEILGVHDSKADMELLQLLLTSFSEL----------PFRPEHRPQLLIGHH 164

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D L    +  RA+ +    G   + +       D++    +   L  E  +I+   
Sbjct: 165 RIVSDILTHLPMEHRALARDALTGFDPLAIQNQGLNEDDAQWLEEVLRLRGEPREIISKL 224

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                        E +  T A       L +I     ++G     I++  +    L  Y 
Sbjct: 225 ------------KERLGATDALLDMEALLEIIIPRAEETG---ILIQLDPSFEPPLNLYN 269

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G V++ +           P     V  GGRYD L+  F      A G        I  ++
Sbjct: 270 GLVFQLVC--------MGPDAPIIVANGGRYDALLGEFGAPESEAAGIGFSF--AIEDIR 319

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
            L              I      + ++ +   Y + L   G+ +E+ L   ++       
Sbjct: 320 EL-LFPMGKNYKPTGSILIAYSKNVTIKEAFSYQRHLHIQGLTSELQLTPCESLQQAESI 378

Query: 424 ADRRNC 429
           A  R  
Sbjct: 379 ARARGA 384


>gi|82701576|ref|YP_411142.1| ATP phosphoribosyltransferase regulatory subunit [Nitrosospira
           multiformis ATCC 25196]
 gi|109892436|sp|Q2YBX1|HISZ_NITMU RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|82409641|gb|ABB73750.1| tRNA synthetase, class II (G, H, P and S) [Nitrosospira multiformis
           ATCC 25196]
          Length = 393

 Score = 96.1 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 73/402 (18%), Positives = 134/402 (33%), Gaps = 47/402 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D    E      +   + +     G++ +  PLLEY +SL      +      V
Sbjct: 8   LPEYIEDILPAEALKIEMMRRRVLDWLFVNGYELVGPPLLEYVESLLTGSGGQMNLR--V 65

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             + D   G+ + LR D+T  +AR  A +        R    G V      G  R R+ +
Sbjct: 66  LKVVDQLSGRMMGLRADMTPQVARIDA-HLLNRKGITRLCYAGSVLHARPSGLTRTREPL 124

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     +D E+  +M  +L   G+   + H+ + +  +  G++   G+  D +
Sbjct: 125 QIGAELYGHQGLESDLEIQRLMLQSLAIAGV--GNIHLDLGHVAVFRGLIRSTGISPDLE 182

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                  +     L       +K L    +        +   L  E             E
Sbjct: 183 -------MELSGALQGKDKAALKELCAGLKKQVDASVREALQLLPEL---------YGDE 226

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +      +       K  +EL +++  +       + +      +RG  Y++G V+ A
Sbjct: 227 NVLTLARSALPSYPGIMKALDELEMVASELS---PLVDTLAFDLADLRGYHYHSGMVFAA 283

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            ++  GGRYD +   F  +  PATGFS+ +  L   +       
Sbjct: 284 YTDN----------CPNAIAVGGRYDEVGKAFG-RARPATGFSMDLRELSGLM------- 325

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            +       ++     +  +L K       LR  G    + L
Sbjct: 326 -SSDSHPRGILAPFIKEDKALEKKIE---QLRNEGQIVIVAL 363


>gi|72382147|ref|YP_291502.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus str. NATL2A]
 gi|109892439|sp|Q46L29|HISZ_PROMT RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|72001997|gb|AAZ57799.1| histidine--tRNA ligase [Prochlorococcus marinus str. NATL2A]
          Length = 391

 Score = 96.1 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 140/427 (32%), Gaps = 46/427 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++R  + I   + ++Y+ +G++ I  P +E  D+L          
Sbjct: 1   MTLQPASGARDLNPQQVRKNHLIASKLSSLYQLWGYERISPPHIERLDTLTAAGG---IS 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           N  +  +     + + LR ++TA + R  +  F+    P R +  G  F+  +   G   
Sbjct: 58  NNEILKIV--SDEPLGLRPEITASIVRAASTRFNEYERPLRFWSAGTSFKCNQSIDGGID 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                         +  +AE+ ++         I+ +  +           +   +    
Sbjct: 116 IEESFQSGVELIGTKAINAEIELLSLLIESLEVIEIDQKYKMTLLIGNTYLLELILSSFD 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K+++   +L  +D +                           ++  EQ   + + +++
Sbjct: 176 STKIDQIKKILSDLDYI----------------------ALTTLDVKEEQRMFIKTIMNM 213

Query: 247 DLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             + + +    + + G+ +      EL  I E + K      ++  +           G 
Sbjct: 214 RGKPEKVLTNLQNIYGSNSYIDKLEELFTIIEPLAKEKGIEVQLDPTL----------GT 263

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            Y+   G              ++  GGRYD LV +F        G    IS   V     
Sbjct: 264 KYKLYSGLTFSLVSSSTSAPVTIAKGGRYDDLVKKFSSSAQNCYGIGFSISVDKV---RE 320

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG--NQL-- 421
             ST+  K +  V +      S +L K     + L   GI + +     K     NQL  
Sbjct: 321 LVSTSKEKLVNNVKVLIAYKQSANLYKALKQQKELHRKGIISVISHEPLKTIDETNQLLK 380

Query: 422 -KYADRR 427
               ++ 
Sbjct: 381 TNRCNKI 387


>gi|93005474|ref|YP_579911.1| ATP phosphoribosyltransferase regulatory subunit [Psychrobacter
           cryohalolentis K5]
 gi|109892444|sp|Q1QD26|HISZ_PSYCK RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|92393152|gb|ABE74427.1| tRNA synthetase, class II (G, H, P and S) [Psychrobacter
           cryohalolentis K5]
          Length = 387

 Score = 96.1 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 66/406 (16%), Positives = 134/406 (33%), Gaps = 44/406 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D   ++   +  +   +     ++G+  +  P++E+++SL     ++    +  
Sbjct: 2   LPDGVVDVLFEDAHKQEVLRHQLIQQLISHGYQLVNPPMIEFTESLLSGASED--LKRQT 59

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  + R  A +        R    G V      G    R  +
Sbjct: 60  FKIIDQLTGRLMGIRADITPQILRIDAHHGGD--GIARYCYAGDVIHTLPSGLFGSRTPL 117

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     AD E+  ++   L ++ +     H+ + +  I   + E   L   D 
Sbjct: 118 QLGAEIFGCEYIAADIELIDVLFSMLNSLEMSAA-LHVDLGHVAIFKRLAELAVLSESD- 175

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              + +  L             +   L S+     ++    D+ 
Sbjct: 176 ------------------TEQLMQLYANKNLPELKQVCQALPLGSDFYT--LARFGHDIA 215

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +  L E  +         +EL  +   ++     +  I ++   + G  Y+TG V+  
Sbjct: 216 NLLGRLSENAQQDAQIVTAIDELQRLKAHLQVQWQCAVSIDVT--ELSGYHYHTGIVFNG 273

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS-RLIVALKSLESS 368
            +                +  GGR+DG+ S     N P       +    ++A   L++ 
Sbjct: 274 YINSETQ----------PLVRGGRFDGMKSNQLATNQPRQATGFSMDVSRLLAHTQLDAP 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              + +         D  S+ L         LR  G R  M L + 
Sbjct: 324 VIVLVDYDAFK----DLGSEQLQLLLQQVASLRQQGYRVTMPLTAK 365


>gi|330899898|gb|EGH31317.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 268

 Score = 96.1 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 103/283 (36%), Gaps = 29/283 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                      D L +  +  V  L               A+L  E   ++ + + +   
Sbjct: 184 QQ-------LFDALQRKAIDEVIAL--------------TADLPPELATMLRALVDLCGG 222

Query: 249 EKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIK 290
            + +    + + G  A      ++L+ I+E +           
Sbjct: 223 REVLDAARDRLAGAPAPVLAALDDLLSIAERLTARFPQLPLYF 265


>gi|120602767|ref|YP_967167.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|152112308|sp|A1VE74|SYP_DESVV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120562996|gb|ABM28740.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 574

 Score = 96.1 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 62/543 (11%), Positives = 131/543 (24%), Gaps = 80/543 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R  N++   +R      G   +  P+++ +D L +     +  
Sbjct: 31  MIRKLTSGIYTFMPMGLRALNKVAAIVREEMNRAGAQEVLMPMVQPAD-LWQETGRWEFY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +   +D + +   L         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRFRDRNDRDYCLGPTHEEVITDLVRGEVRSYRQLPINLYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D   +  + +   M          +G+    +     +   + G  
Sbjct: 150 MRGREFVMKDAYSFDRDQAGCDESYKAMYTAYQRIFSRLGL---RFRAVEADSGSIGGSF 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV---------KLLLGEGRTDNSGDFTKGA 230
               +   D   + L V  A +         V            L E  T  +    + +
Sbjct: 207 SHEFMVLADTGEDTLAVCTACEYAANVERAEVTGTPCTRPAAAALAEVPTPGAHTIEEVS 266

Query: 231 NLTSEQIDIMVSFLSIDLEKS-----MHELYELVKGTIAGEKGFNELV-VISELVRKSGY 284
                  D++V  L    +       +    EL +  +    G + L     E V     
Sbjct: 267 AFLGVSADMLVKTLLFVADGEPVAALVRGDRELNEVKLKNLLGADSLELATPEQVEAWTG 326

Query: 285 NSNRIKISSTIVRGLEYYTGCVYE----AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                     +      +     E     I+G    +   + V          Y  L   
Sbjct: 327 APVGFAGPVGLHGVKRVFADTELEGDAGWIVGANKADTHLREVSLTRDAAIEAYADLRMI 386

Query: 341 FKGQNVPATGFSIGISRLIVA------------------LKSLESSTNNIKEMGPVLI-- 380
                 P  G ++ + + I                    L         +     + +  
Sbjct: 387 TASDPCPRCGGAVELPKGIEVGHVFKLGLKYSKSMNATFLDENGKEQVMVMGCYGIGVSR 446

Query: 381 --------------TTMDHDSDSLSKYQMYT---------------QMLRTAGIRAEMFL 411
                                       +                   L   G    +  
Sbjct: 447 VVASCIEQNNDGDGIVFPPPIAPYEVALLLLDPKNEEAAAKAAEIESFLEAEGHDVLLDD 506

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
              +  G + K AD    P  ++ G    +RG+++ K+   G++    ++          
Sbjct: 507 RDER-PGVKFKDADLIGSPYQLVLGGKGLARGVVEAKNRRSGEKTELPVEGFAEAFRDWR 565

Query: 472 AQI 474
           A +
Sbjct: 566 AGV 568


>gi|299067276|emb|CBJ38473.1| hetero-octameric ATP phosphoribosyl transferase, tRNA
           synthetase-like subunit [Ralstonia solanacearum CMR15]
          Length = 386

 Score = 96.1 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 79/396 (19%), Positives = 132/396 (33%), Gaps = 56/396 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +++  YG++ +  P+LEY +SL      +       
Sbjct: 6   LPESIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYIESLLSGTGHDLDLK--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ I LR D+T  +AR  A +        R    G V      G    R+ +
Sbjct: 64  FKLVDQLSGRTIGLRADITPQVARIDA-HLLNRAGVTRLCYAGSVLHTRPSGFHVTREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M            D  + + +  +L  +L +  +  D +
Sbjct: 123 QIGAEIYGHAGLEADLEIQDLMLA--ALSAAGLADVRLDLCHVSVLAALLAQALVAPDVQ 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +   L           T  A L + Q D +    S+   
Sbjct: 181 -------------------DELFAALASKDAPALHALT--AGLPAAQRDAINLLPSLYGG 219

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +      +    A  +  ++L  ++            + I    +RG  Y++G ++ 
Sbjct: 220 VDVLARARAQLPQLPAIGRALDDLATLAAHA-----GGAAVNIDLADLRGYHYHSGVMFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +            V  +V  GGRYD +   F  +  PATGFS         L   E +
Sbjct: 275 AYVA----------GVPNAVARGGRYDKVGEAFG-RARPATGFS---------LDLREVA 314

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             +  E     I         L +       LR AG
Sbjct: 315 GISPVEARAAAIHAPWSGDAKLREAIA---GLRAAG 347


>gi|326316289|ref|YP_004233961.1| histidyl-tRNA synthetase 2 [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373125|gb|ADX45394.1| histidyl-tRNA synthetase 2 [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 384

 Score = 96.1 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 138/397 (34%), Gaps = 58/397 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +    YG++ +  P+LE+ +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLIDTARGYGYELVMPPMLEHLESLLSGTGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ I LR D+T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQLSGRSIGLRADMTQQVARIDA-HLLNRSGVTRLCYCGPVLHTRPDRPRATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G S   AD E  ++  D L   G++     + +++ +I+  +LE I       
Sbjct: 123 QFGAEIYGHSGMEADLESVLLALDCLHLAGVEG--VSVDLSDARIVRTLLEPIAADA--- 177

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG-ANLTSEQIDIMVSFLSIDL 248
                                V+ + G     ++ + ++  A L  +    + + L +  
Sbjct: 178 -------------------ATVRRIYGALAAKDASELSQASAGLPPDTRRALSAVLELYG 218

Query: 249 E-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           + + + E    + G    ++  + L  I+  +         +      +RG  YY+G  +
Sbjct: 219 DARVLDEARTALSGVAGVDEVLSNLKSIAAHLEGR-----PVSFDLADLRGYSYYSGARF 273

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                              +V  GGRYD + + F     PA GFS+ I +L+  +     
Sbjct: 274 TIYARN----------ATDAVVRGGRYDEVGAAFGRT-RPAAGFSLDIKQLVGIVPPRTL 322

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                                +      +   LR+AG
Sbjct: 323 KAAIKAPW------------AATPDAHRFIAQLRSAG 347


>gi|253999396|ref|YP_003051459.1| histidyl-tRNA synthetase 2 [Methylovorus sp. SIP3-4]
 gi|253986075|gb|ACT50932.1| histidyl-tRNA synthetase 2 [Methylovorus sp. SIP3-4]
          Length = 386

 Score = 95.7 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 76/391 (19%), Positives = 145/391 (37%), Gaps = 41/391 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D    E      +   + +++  +G+  +  PLLEY +SL   +  +       
Sbjct: 6   LPEYIEDVLPAEAARMEHLRRQLLDLFAVHGYQFVIPPLLEYLESLITGVGHDLDL--AT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D T   AR  A +        R    G V R    G  + R+ +
Sbjct: 64  FKVVDQLTGRLMGVRADTTPQAARIDA-HMLNNQGVSRLCYAGSVLRTTPSGLAQTREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   +D E+  +M   L+  G+     H+  ++  I   ++ + G++ + +
Sbjct: 123 QLGAELFGHAGVESDIEVQRLMVKALKLAGVT--QLHLDFSHVGIFRHLVRQAGVNSELE 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                        L       V+ L            T G + T+     +++ L+    
Sbjct: 181 QALYA-------ALQSKDQAEVRNL------------TAGLDATTSAALCVLTELNG-GA 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +    +++  T A      +L  +++ ++        +      +RG  Y++G V+ A
Sbjct: 221 DVLERAAQVLPATSAIAAALADLRQVAQQLQD---LDVNVCFDLAELRGYHYHSGMVFAA 277

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                           G +  GGRYD + S F  +  PATGFS+ +  L+ AL   E + 
Sbjct: 278 YAQGYA----------GPLALGGRYDEVGSAFG-RARPATGFSLDLRGLVTALPPAEIAQ 326

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                       T   D+   ++ Q+  Q L
Sbjct: 327 AIFAPYDHDPALTAKVDA-LRAEGQIVIQEL 356


>gi|313201419|ref|YP_004040077.1| histidyl-tRNA synthetase 2 [Methylovorus sp. MP688]
 gi|312440735|gb|ADQ84841.1| histidyl-tRNA synthetase 2 [Methylovorus sp. MP688]
          Length = 401

 Score = 95.7 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 76/391 (19%), Positives = 145/391 (37%), Gaps = 41/391 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D    E      +   + +++  +G+  +  PLLEY +SL   +  +       
Sbjct: 6   LPEYIEDVLPAEAARMEHLRRQLLDLFAVHGYQFVIPPLLEYLESLITGVGHDLDL--AT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D T   AR  A +        R    G V R    G  + R+ +
Sbjct: 64  FKVVDQLTGRLMGVRADTTPQAARIDA-HMLNNQGVSRLCYAGSVLRTTPSGLAQTREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   +D E+  +M   L+  G+     H+  ++  I   ++ + G++ + +
Sbjct: 123 QLGAELFGHAGVESDIEVQRLMVKALKLAGVT--QLHLDFSHVGIFRHLVRQAGVNSELE 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                        L       V+ L            T G + T+     +++ L+    
Sbjct: 181 QALYA-------ALQSKDQAEVRNL------------TAGLDATTSAALCVLTELNG-GA 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             +    +++  T A      +L  +++ ++        +      +RG  Y++G V+ A
Sbjct: 221 DVLERAAQVLPATSAIAAALADLRQVAQQLQD---LDVNVCFDLAELRGYHYHSGMVFAA 277

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                           G +  GGRYD + S F  +  PATGFS+ +  L+ AL   E + 
Sbjct: 278 YAQGYA----------GPLALGGRYDEVGSAFG-RARPATGFSLDLRGLVTALPPAEIAQ 326

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                       T   D+   ++ Q+  Q L
Sbjct: 327 AIFAPYDHDPALTAKVDA-LRAEGQIVIQEL 356


>gi|78066572|ref|YP_369341.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia sp.
           383]
 gi|109892204|sp|Q39FR9|HISZ_BURS3 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|77967317|gb|ABB08697.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia sp. 383]
          Length = 382

 Score = 95.7 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 82/395 (20%), Positives = 136/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLGHAGVLAALL---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D       + +   L         + T      +      +  L  D  
Sbjct: 171 ---------ARDAQAAERGESLYDALSGKDVPLLNELTDDLGADTRAALRALPHLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++   +        + I    +RG  Y++G ++ A
Sbjct: 222 -VLAEARTRLPVLPEITRALDDLAQLAAQAK-----GAEVAIDLGDLRGYAYHSGAMFSA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  ++  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YI----------DGVPNAIARGGRYDHVGQAYG-RARPATGFS---------LDLRELAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+LS        LR AG
Sbjct: 316 ISPVEARGTAILAPWAQDDALSAA---VAALRDAG 347


>gi|332284644|ref|YP_004416555.1| ATP phosphoribosyltransferase regulatory subunit [Pusillimonas sp.
           T7-7]
 gi|330428597|gb|AEC19931.1| ATP phosphoribosyltransferase regulatory subunit [Pusillimonas sp.
           T7-7]
          Length = 388

 Score = 95.7 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 79/410 (19%), Positives = 149/410 (36%), Gaps = 53/410 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + ++Y  YGF+ +  PL+EY +SL      +       
Sbjct: 7   LPESLADILPAEARRIEELRRGLLDLYRTYGFELVAPPLVEYIESLLSGTGADLNLR--T 64

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + +R D+T  ++R  A +        R    G V      G    R+ +
Sbjct: 65  CKLIDQISGRTLGVRADITPQVSRIDA-HLLNREGVTRLCYCGTVLHARPAGLLSDRELL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +   +++  G++     + +N+  +L  I++      D  
Sbjct: 124 QIGAEIFGHAGVEADIEVIELALASVKQAGVR--HARVDLNHPGVLRSIIDADPSLAD-- 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL- 248
                   R  D LD   + G+  L            T+ A +    I  +V   S+   
Sbjct: 180 -----HAERIYDLLDTKDIPGLTELG-----------TQIAGVQQGSIQALVQLASLYGT 223

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +   ++    A     ++L  +   +    ++ +     + +  G  Y++G V+ 
Sbjct: 224 TEVITKARAVLPALPALHAALDDLETLITALPAHEFSVDL----ADMGSGYGYHSGVVFS 279

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                             ++  GGRYDG+   F  ++ PATGFS+ + +L   L +   +
Sbjct: 280 IYA----------HGWHDALVRGGRYDGVGRAFG-RSRPATGFSLDLRKLSSGLSAAPVA 328

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGSSKNF 417
                  G              +      + LR AG I  +M  G  +  
Sbjct: 329 KAVRAPWGTD------------AALVEALRQLRAAGEIVVQMLPGQPQRL 366


>gi|120610120|ref|YP_969798.1| class II tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166219814|sp|A1TM36|HISZ_ACIAC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|120588584|gb|ABM32024.1| tRNA synthetase, class II (G, H, P and S) [Acidovorax citrulli
           AAC00-1]
          Length = 384

 Score = 95.3 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 4/150 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +    YG++ +  P+LE+ +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLIDTARGYGYELVMPPMLEHLESLLSGTGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ I LR D+T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQLSGRSIGLRADMTQQVARIDA-HLLNRSGVTRLCYCGPVLHTRPDRPRATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           Q   +  G S   AD E  ++  D L   G
Sbjct: 123 QFGAEIYGHSGMEADLESVLLALDCLHLAG 152


>gi|76665003|emb|CAJ17944.1| histidyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 80

 Score = 95.3 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 36/75 (48%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
          +G  D   ++  + +++   +   ++ + F  I TP++EY++   +     +  +K  ++
Sbjct: 6  KGTCDLLPEQTLLWHQVETVLHAFFKRHNFGEIRTPIMEYTEVFHRAAQHSEMVSKETYT 65

Query: 73 LQDDDGQWISLRYDL 87
            D   + ++LR + 
Sbjct: 66 FLDKKKRSLTLRPEG 80


>gi|332530171|ref|ZP_08406119.1| class II tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332040363|gb|EGI76741.1| class II tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 402

 Score = 95.3 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 136/397 (34%), Gaps = 45/397 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +    YG++ +  PLLEY  SL          N   
Sbjct: 6   LPDHIADVLPSEARHIEELRRDLLDTARAYGYELVTPPLLEYLTSLL--SGASQALNLQT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV           R+ +
Sbjct: 64  FKLVDQLSGRSMGLRADTTPQVARIDA-HLLNRRGVARLCYCGPVVHTRPASAHATREPM 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +  D L +  +    + + + + +I+  +LE  G+     
Sbjct: 123 QFGAEIYGHAGAEADLEILELALDCLRSARLPA--HTLDLADARIVSALLESEGVA---- 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA-NLTSEQIDIMVSFLSIDL 248
                        L     + +   L            +G   L+++    +++   +  
Sbjct: 177 ------------PLGAEVKEAIHAALAAKDVPTLAGLVRGLTGLSAQARQGLLALPGLYG 224

Query: 249 E-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           + + + E   ++    A  +    L  ++  +   G     +      +RG  YY+G  +
Sbjct: 225 DAQVLDEAARVLPALPAVGQALAGLRWLARSL--GGRTGVSVGFDLADLRGYGYYSGMRF 282

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                           V  ++  GGRYD + + F  +  PA GFS+ +  L+ A+ +   
Sbjct: 283 AVYAA----------GVSDALLRGGRYDEVGAVFG-RKRPAVGFSLDLKTLVGAVPARAL 331

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                             D  + +  +     LR  G
Sbjct: 332 RAAIRAPW--------PGDEPAATDLRAAIARLRAQG 360


>gi|119181824|ref|XP_001242094.1| hypothetical protein CIMG_05990 [Coccidioides immitis RS]
          Length = 1508

 Score = 95.3 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 83/488 (17%), Positives = 158/488 (32%), Gaps = 56/488 (11%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ ++  + D +  I+  +G   +ET       +     P  +    GV  L D DG  +
Sbjct: 1009 EMVLQGAVKDQLIAIFRKHGA--VET-------TRQTVFPRSNHYGPGVVRLLDPDGNQV 1059

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
             L +DLT P AR V+    +I        +     +                 N    A 
Sbjct: 1060 QLPFDLTLPNARSVSRQHPSIDKMFSFGTVFREALHGGQPRAHNEVDFDIVSHNTLDLAL 1119

Query: 142  TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
                 + ++     E   ++       +N+  +LD I+    +    +   + ++ +   
Sbjct: 1120 KEAEAIKVLDEILDEFPSLRTAQMCYHLNHSDLLDTIIAFCRISSKQRPLVKEVISKL-- 1177

Query: 202  KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL-EKSMHELYELVK 260
             +  + +Q ++  L                + S  ID +  F   D  EK++  L  +++
Sbjct: 1178 NVGHYTMQKIRTELR----------APTIGVASTSIDDLARFDFRDSPEKALKRLRLIME 1227

Query: 261  GTIAGEK---GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
             T   +K    F  L  +   +++            + V    Y    +++ I      +
Sbjct: 1228 DTEFVDKLTPIFARLNAVISYLKRFRVRRKIYISPLSSVNNKFYGGSILFQCIFDTRRKD 1287

Query: 318  EKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFSIGISRLIVALKSLESSTNN 371
                         GGRYD L+  F+           A GF +   +L  ++ +L      
Sbjct: 1288 ---------VFAAGGRYDSLIQEFRPKIMSSRPQCHAVGFYLSFDKLTASMANLVKGRTK 1338

Query: 372  -----------IKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                       I       +     DS+   +        L T  I AE+ + +S +   
Sbjct: 1339 GSSKHISDIGDIWRKRKCDVLVASFDSNVLRTLALDILSELWTHDISAELAIDAS-SLEE 1397

Query: 420  QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
             L      N    +I       RG L+IK LA+ +E      +  +W  A +        
Sbjct: 1398 LLTRYRDDNHSWVVIVKQDSLDRG-LKIKSLARKEEFDVRCGDLVAWIRAEIRHR--NQK 1454

Query: 480  ELVSTVKK 487
            E   T+K 
Sbjct: 1455 EKAETLKS 1462


>gi|302756755|ref|XP_002961801.1| hypothetical protein SELMODRAFT_75952 [Selaginella moellendorffii]
 gi|300170460|gb|EFJ37061.1| hypothetical protein SELMODRAFT_75952 [Selaginella moellendorffii]
          Length = 918

 Score = 95.3 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 70/477 (14%), Positives = 150/477 (31%), Gaps = 44/477 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K +  +  ++   +++   +G     +P +           D    N+    + +  
Sbjct: 451 LTPKWLTAQELVIGLTKDVLTRHGARKFRSPSM-------TVASDVKTSNRSAVKVINSS 503

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G    LRYD     AR+V  N  T                +  G    ++++Q D D +G
Sbjct: 504 GTMFELRYDTRLLFARWVVLNQSTSWK----RYEISHTYRKGVGYRAPKEYLQGDFDIIG 559

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A+AE+    AD +  V             R     IL+ I         +R  V 
Sbjct: 560 GYRALAEAEVIKAAADIISRV-----SSTETCELRLNHLEILDTIWSWSGVTRQQRKNVA 614

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF---LSIDLEKSMHE 254
           + +  +     Q             +    +G +L+   +D + +     + + ++ +  
Sbjct: 615 QILGTMTFLRPQSADRKARWVFLCEAQFLLQGLHLSEAVVDRLQTAERRFTGNADEVLAR 674

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           L   +  + +  +   EL  +   +R        + +   IV    Y+    ++      
Sbjct: 675 LRGALSNSPSSIEAIEELSRLLSYLRNW-RVEMLLTVDVFIVPSDYYFNAAYFQIYFP-- 731

Query: 315 VMNEKQKPVVFGSVGG-GGRYDGLVSR-----FKGQNVPATGFSIGISRLIVALK----- 363
                  P   G +   GGRYD L+              A G +I + +LI         
Sbjct: 732 ---RTSYPGAQGMLLAVGGRYDVLLEHLAKDYGVHTPPGAVGLTIALQKLIHIAMKDRYY 788

Query: 364 -------SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                   L  S +  +     ++         L +       L +A ++A+     + +
Sbjct: 789 GSLFINAELSLSCSKNETEPAEVLVCCRGGGGLLKERMELADELWSANVKADFVCAIAPS 848

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVA 472
              Q +YA      + +I      S+G+++ ++ L    E+     +        ++
Sbjct: 849 LTEQYEYAHDNGIKVLVIITESGLSQGVVKVVRHLDFKFEVDVRRDDLAKSLADLIS 905


>gi|227432046|ref|ZP_03914062.1| ATP phosphoribosyltransferase regulatory subunit / ATP
           phosphoribosyltransferase catalytic subunit [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
 gi|227352201|gb|EEJ42411.1| ATP phosphoribosyltransferase regulatory subunit / ATP
           phosphoribosyltransferase catalytic subunit [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
          Length = 536

 Score = 95.3 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 93/473 (19%), Positives = 166/473 (35%), Gaps = 74/473 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M    K+   L  G  D   ++++ + +I   I  I  +  F PI TPL+E   +  K+ 
Sbjct: 1   MNMNDKV---LAAGSRDEFGEKLQQKQKISQMITTILNDADFTPINTPLIERESTFDKY- 56

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                 NK VF L D  G+ + LR DLT P+AR+++ N        R Y IG VFR    
Sbjct: 57  -----QNKNVFRLFDQVGENLVLRPDLTLPIARFLSANRQQNSMS-RLYYIGDVFRRTDS 110

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G + Q  Q  ++ +G  +  A+ +    M    +  GI   D  + +++ + +D +LE
Sbjct: 111 LSGDYNQETQAGIELIGDQSFEAEIQALDTMLKFAQEFGIV--DVQVVLSDARFIDVVLE 168

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L  D +      + +AI++ +    + ++  + +       +   G  L        
Sbjct: 169 NLQLDQDLR----QRMKQAIEQKNVSVFEELRATIPDFP-----EGLAGWPLA------- 212

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                 D E  M +L E+               +         Y +  + +         
Sbjct: 213 ---FGEDGETVMWQLQEIPAVNDIIND-----WLKLAECTHKHYPAVAVTVDLAAASPQL 264

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +    +                +  GGRYD L+  F+ +++PA G  + I  ++ 
Sbjct: 265 YYTGTIIRGFVPSLG----------RYLFSGGRYDRLLENFQNKSLPAVGMGLNIETILA 314

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF--- 417
                        +   V++                      AGI   +    ++     
Sbjct: 315 --DWRRKPEEMKPQEPIVMVLGKGRVEKDARPLLK------AAGIDTSLLENPARKLIFD 366

Query: 418 ----GNQL---------KYADRRNCPLAIIQGTG---ERSRGMLQIKDLAKGK 454
                 +          KY DR       I G+    E+ R    + +L  GK
Sbjct: 367 STEGKYRFILVKPSDVVKYLDR-GIGDVGIVGSDTIAEQVRNHYDVLNLQTGK 418


>gi|227512204|ref|ZP_03942253.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus buchneri ATCC 11577]
 gi|227084598|gb|EEI19910.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus buchneri ATCC 11577]
          Length = 385

 Score = 95.3 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 23/258 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K      LP G  D    +  ++  I   +  ++++ GF  + TP+LEYSD      
Sbjct: 1   MKNKN-----LPNGTRDEFGVQAEVKEAIQMKLLGLFKDRGFRKLTTPVLEYSDVFEPLS 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D  RP    +   D+ G+ + LR DLT P+AR ++     +    + Y  G VFR ++ 
Sbjct: 56  TDNYRP----YQFLDEQGETLVLRPDLTLPVARVMSTTGVDLP--VKWYYSGDVFRVKRR 109

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G + Q  Q  ++ +G     AD E   +     + +G+   D  + I+  K +D ++ 
Sbjct: 110 LSGSYNQTTQAGIEIIGYKGIKADWECLQVALSGCQQMGL--EDVTVEISQAKFVDTVIN 167

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGV-----KLLLGEGRT-----DNSGDFTKGA 230
           ++ L    + + ++ +        +     +     +  L E        D      +  
Sbjct: 168 QLELPEPTRNSLKMALFDKDLNRYQSLWSPLVHTKFEKFLAEWPWLFGDFDQVIRIVETL 227

Query: 231 NLTSEQIDIMVSFLSIDL 248
             ++E   I+   ++   
Sbjct: 228 PRSTELEAIIKDLIATKS 245


>gi|254248080|ref|ZP_04941401.1| ATP phosphoribosyltransferase [Burkholderia cenocepacia PC184]
 gi|124872856|gb|EAY64572.1| ATP phosphoribosyltransferase [Burkholderia cenocepacia PC184]
          Length = 394

 Score = 95.3 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 135/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 18  LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 75

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 76  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 134

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 135 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLGHAGVLAALLA-------RD 185

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L    +  +  L  +   D         NL  +              
Sbjct: 186 AQAAERGESLYDALSGKDVPLLNELTDDLGADTRAALRALPNLYGDA------------- 232

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++   +        + I    +RG  Y++G ++ A
Sbjct: 233 SVLAEARTRLPVLPEITRALDDLAQLASQAK-----GVEVAIDLADLRGYAYHSGAMFSA 287

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  ++  GGRYD +   +  ++ PATGFS         L   E + 
Sbjct: 288 YI----------DGVPNAIARGGRYDHVGQAYG-RSRPATGFS---------LDLRELAR 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 328 ISPVEARGTAILAPWAQDDALGAA---VAALRDAG 359


>gi|107029018|ref|YP_626113.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           cenocepacia AU 1054]
 gi|116689823|ref|YP_835446.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           cenocepacia HI2424]
 gi|123070911|sp|Q1BGW5|HISZ_BURCA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|166219820|sp|A0K7S6|HISZ_BURCH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|105898182|gb|ABF81140.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia cenocepacia
           AU 1054]
 gi|116647912|gb|ABK08553.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia cenocepacia
           HI2424]
          Length = 382

 Score = 95.3 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 135/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLGHAGVLAALLA-------RD 173

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L    +  +  L  +   D         NL  +              
Sbjct: 174 AQAAERGESLYDALSGKDVPLLNELTDDLGADTRAALRALPNLYGDA------------- 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++   +        + I    +RG  Y++G ++ A
Sbjct: 221 SVLAEARTRLPVLPEITRALDDLAQLASQAK-----GVEVAIDLADLRGYAYHSGAMFSA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  ++  GGRYD +   +  ++ PATGFS         L   E + 
Sbjct: 276 YI----------DGVPNAIARGGRYDHVGQAYG-RSRPATGFS---------LDLRELAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPVEARGTAILAPWAQDDALGAA---VAALRDAG 347


>gi|124025687|ref|YP_001014803.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus str. NATL1A]
 gi|166219835|sp|A2C228|HISZ_PROM1 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|123960755|gb|ABM75538.1| possible Histidyl-tRNA synthetase [Prochlorococcus marinus str.
           NATL1A]
          Length = 391

 Score = 95.3 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 72/410 (17%), Positives = 145/410 (35%), Gaps = 47/410 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++R  + I   + ++Y+ +G++ I  P +E  D+L          
Sbjct: 1   MTLQPASGARDLNPQQVRKNHLIASKLSSLYQLWGYERISPPHIERLDTLTAAGG---IS 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP--VFRNEKHGPGR 124
           N  +  +     + + LR ++TA + R  +  F+    P R +  G          G   
Sbjct: 58  NNEILKIV--SDEPLGLRPEITASIVRAASTRFNEYERPLRFWSAGTSFKCNQSIDGGID 115

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGILEKIG 183
             +  Q  V+ +G+ A  A+ E+  ++ ++LE +   ++    + I N  +L+ IL    
Sbjct: 116 IEESFQSGVELIGTKAINAEIELLSLLIESLEVIEIDQKYKMTLLIGNTYLLELILSSFD 175

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D++ + L  L  I                              ++  EQ   + + 
Sbjct: 176 STKIDQIKKILCDLDYI-------------------------ALTTLDVKEEQRMFIKTI 210

Query: 244 LSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +++  + + +    + + G+ +      EL  I E + K      ++  +          
Sbjct: 211 MNMRGKPEEVLTNLQNIYGSNSYIDKLKELFTIIEPLAKEKGIEVQLDPTL--------- 261

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
            G  Y+   G              ++  GGRYD LV +F        G    IS   V  
Sbjct: 262 -GTKYKLYSGLTFSLVSSSTSAPVTIAKGGRYDDLVKKFSSSAQNCYGIGFSISVDKV-- 318

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
                ST+  K +  V +      S +L K     + L   GI + +   
Sbjct: 319 -RELVSTSKEKLVNNVKVLIAYKQSANLYKALKQQKELHRKGIISVISHE 367


>gi|33597402|ref|NP_885045.1| ATP phosphoribosyltransferase regulatory subunit [Bordetella
           parapertussis 12822]
 gi|33602142|ref|NP_889702.1| ATP phosphoribosyltransferase regulatory subunit [Bordetella
           bronchiseptica RB50]
 gi|46395749|sp|Q7W6Q6|HISZ_BORPA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|46395753|sp|Q7WHP0|HISZ_BORBR RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|33573829|emb|CAE38137.1| putative tRNA synthetase [Bordetella parapertussis]
 gi|33576580|emb|CAE33658.1| putative tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 385

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 92/287 (32%), Gaps = 7/287 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    E R    +   + ++Y  YGF+ +  PL+EY DSL      +       
Sbjct: 6   LPEGLADVLPAEARRIEELRRELLDLYRTYGFELVAPPLVEYIDSLLSSTGSDLNLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + +R D+T+ + R  A +        R    G V           R+ +
Sbjct: 64  CKLVDQLSGRTLGVRADMTSQVTRIDA-HLLNRAGVTRLCYCGSVLHARPADLLSSRELL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  ++ DTL   G++  +  + + +  ++  I +         
Sbjct: 123 QIGAEIYGHAGFEADLEIIQLVMDTLATAGVR--NARLDLCHSGVMRAIFDA-DPQASRH 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +   +LR  D      L      LGE                           ++   
Sbjct: 180 AGDLCTLLREKDVPGLAELASRVDGLGEDTVRALQALATLYGGPEIIARARRELPAVPGM 239

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
               +  + +   + G     +L  +      SG             
Sbjct: 240 AQALDALQALVDAMPGVTLSVDLADVGGYGYHSGVTFAVYGEDWHDA 286


>gi|33593193|ref|NP_880837.1| ATP phosphoribosyltransferase regulatory subunit [Bordetella
           pertussis Tohama I]
 gi|46395746|sp|Q7VWM0|HISZ_BORPE RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|33563568|emb|CAE42467.1| putative tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332382604|gb|AEE67451.1| ATP phosphoribosyltransferase regulatory subunit [Bordetella
           pertussis CS]
          Length = 385

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 92/287 (32%), Gaps = 7/287 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    E R    +   + ++Y  YGF+ +  PL+EY DSL      +       
Sbjct: 6   LPEGLADVLPAEARRIEELRRELLDLYRTYGFELVAPPLVEYIDSLLSSTGSDLNLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + +R D+T+ + R  A +        R    G V           R+ +
Sbjct: 64  CKLVDQLSGRTLGVRADMTSQVTRIDA-HLLNRAGVTRLCYCGSVLHARPADLLSSRELL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  ++ DTL   G++  +  + + +  ++  I +         
Sbjct: 123 QIGAEIYGHAGFEADLEIIQLVMDTLATAGVR--NARLDLCHSGVMRAIFDA-DPQASRH 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             +   +LR  D      L      LGE                           ++   
Sbjct: 180 AGDLCTLLREKDVPGLAELASRVDGLGEDTVRALQALATLYGGPEIIARARRELPAVPGM 239

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
               +  + +   + G     +L  +      SG             
Sbjct: 240 AQALDALQALVDAMPGVTLSVDLADVGGYGYHSGVTFAVYGEDWHDA 286


>gi|227524064|ref|ZP_03954113.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus hilgardii ATCC 8290]
 gi|227088803|gb|EEI24115.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus hilgardii ATCC 8290]
          Length = 411

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 23/258 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K      LP G  D    +  ++  I   +  ++++ GF  + TP+LEYSD      
Sbjct: 27  MKNKN-----LPNGTRDEFGVQAEVKEAIQMKLLGLFKDRGFRKLTTPVLEYSDVFEPLS 81

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D  RP    +   D+ G+ + LR DLT P+AR ++     +    + Y  G VFR ++ 
Sbjct: 82  TDNYRP----YQFLDEQGETLVLRPDLTLPVARVMSTTGVDLP--VKWYYSGDVFRVKRR 135

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G + Q  Q  ++ +G     AD E   +     + +G+   D  + I+  K +D ++ 
Sbjct: 136 LSGSYNQTTQAGIEIIGYKGIKADWECLQVALSGCQQMGL--EDVTVEISQAKFVDTVIN 193

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGV-----KLLLGEGRT-----DNSGDFTKGA 230
           ++ L    + + ++ +        +     +     +  L E        D      +  
Sbjct: 194 QLELPEPTRNSLKMALFDKDLNRYQSLWSPLVHTKFEKFLAEWPWLFGDFDQVIRIVETL 253

Query: 231 NLTSEQIDIMVSFLSIDL 248
             ++E   I+   ++   
Sbjct: 254 PRSTELEAIIKDLIATKS 271


>gi|227509398|ref|ZP_03939447.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227191110|gb|EEI71177.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 385

 Score = 94.9 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 23/257 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K      LP G  D    +  ++  I   +  ++++ GF  + TP+LEYSD      
Sbjct: 1   MKNKN-----LPNGTRDEFGVQAEVKEAIQMKLLGLFKDRGFRKLTTPVLEYSDVFEPLS 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D  RP    +   D+ G+ + LR DLT P+AR ++     +    + Y  G VFR +K 
Sbjct: 56  TDNYRP----YQFLDEQGETLVLRPDLTLPVARVMSTTGVDLP--VKWYYSGDVFRVKKR 109

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G + Q  Q  ++ +G     AD E   +     + +G+   D  + I+  K +D ++ 
Sbjct: 110 LSGSYNQTTQAGIEIIGYKGIKADWECLQVALSGCQQMGL--EDVTVEISQAKFVDTVIN 167

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGV-----KLLLGEGRT-----DNSGDFTKGA 230
           ++ L    + + ++ +        +     +     +  L E        D      +  
Sbjct: 168 QLELPEPTRNSLKMALFDKDLNRYQSLWSPLVHTKFEKFLAEWPWLFGDFDQVIRIVETL 227

Query: 231 NLTSEQIDIMVSFLSID 247
             ++E   I+   ++  
Sbjct: 228 PRSAELEAIIKDLIATK 244


>gi|225076526|ref|ZP_03719725.1| hypothetical protein NEIFLAOT_01574 [Neisseria flavescens
           NRL30031/H210]
 gi|224952205|gb|EEG33414.1| hypothetical protein NEIFLAOT_01574 [Neisseria flavescens
           NRL30031/H210]
          Length = 385

 Score = 94.9 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 72/411 (17%), Positives = 138/411 (33%), Gaps = 50/411 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           ++  +LP   AD      R      + +  ++  +G++ ++ PL+EYS SL   + D   
Sbjct: 1   MKSWQLPEHVADVLPTNARQLESARERLLALFRVHGYELVQPPLMEYSHSLLTHI-DAGL 59

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +  +    G+ + +R D+T  +AR  A          R    G V      G    
Sbjct: 60  SLKTILVVDQLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGSVLHARPDGLLNM 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+ +Q   +  G     AD E+  +M  +++   +   +  + + +  +   +     L 
Sbjct: 120 REPLQAGAEMYGLEGIEADIELIDLMLKSMKIADM--GEVLLSLGHIGVFRALANAAHLD 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                         +  +     + V  L+ E + D               +  +     
Sbjct: 178 EQQSAI-------LLSSMQDKDAEAVSQLVKEWKLDGMWAKAFSL------LPRL----- 219

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + +    E +    A     +EL  + +      + + ++ I  + +R   Y+TG 
Sbjct: 220 YGGREVLTLAREKLPELSAVSAALDELQAVCD-----AFPNQKVHIDLSELRVDNYHTGL 274

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           +Y A                 +V  GGRYDGL   F  +  PA GFS  +   I  L ++
Sbjct: 275 LYAAYGSN----------RHDAVARGGRYDGLGGYFG-RARPAAGFSFDLRSFIGRLPAI 323

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
              +             +  D   +   Q     LR  G    +  G   N
Sbjct: 324 GRES------------VVAVDVKDMPAAQEAVDALREQGQCVVIDYGIGYN 362


>gi|206560237|ref|YP_002231001.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           cenocepacia J2315]
 gi|229464967|sp|B4EAH3|HISZ_BURCJ RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|198036278|emb|CAR52174.1| putative ATP phosphoribosyltransferase [Burkholderia cenocepacia
           J2315]
          Length = 382

 Score = 94.9 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 82/395 (20%), Positives = 133/395 (33%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLGHAGVLAALLA-------RD 173

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L    +  +  L  +   D         NL  +              
Sbjct: 174 AQAAERGESLYDALSGKDVPLLNELTDDLGADTRAALRALPNLYGDA------------- 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  +      S      + I    +RG  Y++G ++ A
Sbjct: 221 SVLAEARTRLPVLPEITRALDDLAQL-----ASQPKGVEVAIDLADLRGYAYHSGAMFSA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  ++  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YI----------DGVPNAIARGGRYDHVGQAYG-RARPATGFS---------LDLRELAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPVEARGTAILAPWAQDDALGAA---VAALRDAG 347


>gi|75762717|ref|ZP_00742552.1| Histidyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74489802|gb|EAO53183.1| Histidyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 215

 Score = 94.9 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 23/234 (9%)

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
            D + + +   L+ S+ +  +    T     G NEL  + + +   G N N I  +  + 
Sbjct: 2   ADTICNTVLSCLKLSIDDFKDAF-NTPIVADGVNELQQLQQYLIALGINENAI-FNPFLA 59

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN--VPATGFSIG 354
           RGL  YTG VYE  L    +           +G GGRYD ++  F+G N   P  G S G
Sbjct: 60  RGLTMYTGTVYEIFLKDGSITSS--------IGSGGRYDNIIGAFRGDNIIYPTVGISFG 111

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGS 413
           +  +  AL   E     I     V I  +  +     +     Q LR+   ++ E+ L +
Sbjct: 112 LDVIYTALSQKE----TISSTADVFIIPLGTE----LQCLQIAQQLRSTTSLKVELEL-A 162

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            +     L YA + N P  +I G  E S   + ++++ +G E+   + +  S+ 
Sbjct: 163 GRKLKRALNYAIK-NIPYVLIIGEEELSTETVMLRNMKEGSEVKVPLSSLSSYL 215


>gi|313618814|gb|EFR90704.1| histidyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 110

 Score = 94.9 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 1/111 (0%)

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +LE +  NI E  P+ +  +    ++  K       LR  GI AE      +    QLK 
Sbjct: 1   ALEKAEINIPETKPLEVYVITAQPEAELKAVTLVNKLRQNGISAEKDY-LKRKLKAQLKD 59

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           A+R+     +I G  E   G  Q+K++  G++ +               + 
Sbjct: 60  ANRKKAIYTVILGEEELQTGNYQLKNMETGEQEAVSETTIIEELTNTKEEK 110


>gi|312862384|ref|ZP_07722627.1| putative histidine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311102027|gb|EFQ60227.1| putative histidine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 184

 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 12/190 (6%)

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +    I + +VRGL+YY   ++E +                ++  GGRYD LV  F G  
Sbjct: 6   NIPYVIDTNMVRGLDYYNHTIFEFVTTIDKSE--------LTICAGGRYDSLVEYFGGPE 57

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
               GF +G+ RL++ L          + +  V I  +   ++   K     Q +R  G 
Sbjct: 58  TAGFGFGLGLERLLLVLDKQGIELPEEESLD-VYIAVLGSGAN--GKALELIQAIRYQGF 114

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +AE      +    Q K AD       I  G  E   G + +K+ A  +E++   +    
Sbjct: 115 KAERDY-LGRKIKAQFKSADTFKAKTVITLGESEVESGQVNVKNNATREEVTVSFEELTK 173

Query: 466 WREARVAQIT 475
              A + Q+ 
Sbjct: 174 NFAAVLKQLE 183


>gi|303318767|ref|XP_003069383.1| RWD domain containing protein [Coccidioides posadasii C735 delta
            SOWgp]
 gi|240109069|gb|EER27238.1| RWD domain containing protein [Coccidioides posadasii C735 delta
            SOWgp]
 gi|320034520|gb|EFW16464.1| protein kinase [Coccidioides posadasii str. Silveira]
          Length = 1602

 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 83/488 (17%), Positives = 158/488 (32%), Gaps = 56/488 (11%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ ++  + D +  I+  +G   +ET       +     P  +    GV  L D DG  +
Sbjct: 1009 EMVLQGAVKDQLIAIFRKHGA--VET-------TRQTVFPRSNHYGPGVVRLLDPDGNQV 1059

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
             L +DLT P AR V+    +I        +     +                 N    A 
Sbjct: 1060 QLPFDLTLPNARSVSRQHPSIDKMFSFGTVFREALHGGQPRAHNEVDFDIVSHNTLDLAL 1119

Query: 142  TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
                 + ++     E   ++       +N+  +LD I+    +    +   + ++ +   
Sbjct: 1120 KEAEAIKVLDEILDEFPSLRTAQMCYHLNHSDLLDTIIAFCRISSKQRPLVKEVISKL-- 1177

Query: 202  KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL-EKSMHELYELVK 260
             +  + +Q ++  L                + S  ID +  F   D  EK++  L  +++
Sbjct: 1178 NVGHYTMQKIRTELR----------APTIGVASTSIDDLARFDFRDSPEKALKRLRLIME 1227

Query: 261  GTIAGEK---GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
             T   +K    F  L  +   +++            + V    Y    +++ I      +
Sbjct: 1228 DTEFVDKLTPIFARLNAVISYLKRFRVRRKIYISPLSSVNNKFYGGSILFQCIFDTRRRD 1287

Query: 318  EKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFSIGISRLIVALKSLESSTNN 371
                         GGRYD L+  F+           A GF +   +L  ++ +L      
Sbjct: 1288 ---------VFAAGGRYDSLIQEFRPKIMSSRPQCHAVGFYLSFDKLTASMANLVKGRTK 1338

Query: 372  -----------IKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                       I       +     DS+   +        L T  I AE+ + +S +   
Sbjct: 1339 GSSKHISDIGDIWRKRKCDVLVASFDSNVLRTLALDILSELWTHDISAELAIDAS-SLEE 1397

Query: 420  QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
             L      N    +I       RG L+IK LA+ +E      +  +W  A +        
Sbjct: 1398 LLARYRDDNHSWVVIVKQDSLDRG-LKIKSLARKEEFDVRCGDLVAWIRAEIRHR--NQK 1454

Query: 480  ELVSTVKK 487
            E   T+K 
Sbjct: 1455 EKAETLKS 1462


>gi|124267175|ref|YP_001021179.1| ATP phosphoribosyltransferase regulatory subunit [Methylibium
           petroleiphilum PM1]
 gi|124259950|gb|ABM94944.1| ATP phosphoribosyltransferase regulatory subunit [Methylibium
           petroleiphilum PM1]
          Length = 387

 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 124/396 (31%), Gaps = 52/396 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +  ++ +    YG++ +  PLLE+ +SL      E       
Sbjct: 7   LPEHIADVLPSEARRIEELRRTVLDAARVYGYELVMPPLLEHLESLLTGTGHELDLR--T 64

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV      G    R+ +
Sbjct: 65  FKLVDQLSGRTLGLRADTTPQVARIDA-HLLNRDGITRLCYCGPVAHTRPAGLHGSREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +  D+L A G+                       L  D  
Sbjct: 124 QFGAELYGHAGLEADLEVQDLALDSLRAAGVPG---------------------LVLDLA 162

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               +  L A    D   L  V   L     D +     G+   +E    + +  S+  +
Sbjct: 163 DARIVRGLLAGVACDPARLNEVYAALA--AKDGTALQALGSGFAAEVRQGLQALTSLYGD 220

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +      +           +L           +   R+      + G  YY+G  + 
Sbjct: 221 GEVLDIAAARLPQRPLITAALADLR-RLAAHAAIAHPDVRVGFDLADLSGYAYYSGARFA 279

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                             S+  GGRYD + + F  +N PA GFS  +          E  
Sbjct: 280 VYGA----------GSSDSLVRGGRYDEVGAVFG-RNRPAVGFSADL---------KEVV 319

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                +     +     +   L       + LR  G
Sbjct: 320 QRACPDGRRAAVRAPWGEETGLRAA---VRALRAGG 352


>gi|170733162|ref|YP_001765109.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           cenocepacia MC0-3]
 gi|229822707|sp|B1JT82|HISZ_BURCC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|169816404|gb|ACA90987.1| tRNA synthetase class II (G H P and S) [Burkholderia cenocepacia
           MC0-3]
          Length = 382

 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 135/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLGHAGVLAALLA-------RD 173

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D L    +  +  L  +   D         NL  +              
Sbjct: 174 AQAAERGESLYDALSGKDVPLLNELTDDLGADTRAALRALPNLYGDA------------- 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++   +        + I    +RG  Y++G ++ A
Sbjct: 221 SVLAEARTRLPVLPEITRALDDLAQLASQAK-----GVEVAIDLADLRGYAYHSGAMFSA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  ++  GGRYD +   +  ++ PATGFS         L   E + 
Sbjct: 276 YI----------DGVPNAIARGGRYDHVGQAYG-RSRPATGFS---------LDLRELAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       D+L         LR AG
Sbjct: 316 ISPVEARGTAILAPWAQDDALCAA---VAALRDAG 347


>gi|187478824|ref|YP_786848.1| ATP phosphoribosyltransferase regulatory subunit [Bordetella avium
           197N]
 gi|109892201|sp|Q2KYA6|HISZ_BORA1 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|115423410|emb|CAJ49944.1| ATP phosphoribosyltransferase regulatory subunit [Bordetella avium
           197N]
          Length = 385

 Score = 94.5 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 75/405 (18%), Positives = 139/405 (34%), Gaps = 54/405 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    E R    +   + ++Y  YGF+ +  PL+EY DSL   +  +       
Sbjct: 6   LPEGLADVLPAEARRIEELRRELLDLYRTYGFELVAPPLVEYIDSLLSGMGGDLNL--YT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + +R D+T  ++R  A +        R    G V           R+ +
Sbjct: 64  CKLIDQLSGRTLGVRADMTTQVSRIDA-HLLNRNSVTRLCYCGTVLHARPADLLSSRELL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     AD E+  ++ +T+   G+ R    + +++  ++  + +         
Sbjct: 123 QIGAEIYGHVGFEADLEILQLVLETVAIAGVSRP--RLDLSHPGVVKALFDA-DPAAAAI 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               +++LR  D      L GV+                   L ++ +  + + + +  E
Sbjct: 180 SGRIIMLLREKDVAGLAELAGVE-----------------PALRADTLAALGALVRLYGE 222

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              +    + +    A     +EL  +             + +    V G  Y++G  +E
Sbjct: 223 IDVIDRARQELPALPALVLALDELERL-----ARAVPDVALGLDLADVGGYGYHSGVTFE 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                             ++  GGRYD +   F  +  PATGFS+ + +L   L   E  
Sbjct: 278 LYAQ----------GWHDALVRGGRYDDVGRAFG-RARPATGFSLDLRKLAAGLSPAEPG 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLG 412
                  G                     + LR  G I  ++  G
Sbjct: 327 RAIRAPWGQDPALVGA------------VRALRHTGEIVVQVLPG 359


>gi|139439511|ref|ZP_01772943.1| Hypothetical protein COLAER_01969 [Collinsella aerofaciens ATCC
           25986]
 gi|133775064|gb|EBA38884.1| Hypothetical protein COLAER_01969 [Collinsella aerofaciens ATCC
           25986]
          Length = 571

 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 6/172 (3%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P GF D   +E + R  I  +++  +  + + P+ETPLLE   SL +     D P    
Sbjct: 4   TPWGFRDILPEEAQAREEIALTVKGCFREHHYLPVETPLLEDKGSLEEGGRIADTP---- 59

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           F L DDDG+ + +R D T P+ R V+        P R     PV R  +   G  RQF Q
Sbjct: 60  FKLFDDDGRLLVVRSDNTLPIVRLVSTRMRAADLPLRLRYEAPVVRECQRNAGGSRQFTQ 119

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
              + +G+     D E+  ++A+ +  + +   D HI   + +    +L   
Sbjct: 120 LGFELIGAGDTAGDVEIVSLVAEAVRKLAL--PDAHIIAGSVRPFKELLAAC 169


>gi|94984890|ref|YP_604254.1| ATP phosphoribosyltransferase regulatory subunit [Deinococcus
           geothermalis DSM 11300]
 gi|94555171|gb|ABF45085.1| ATP phosphoribosyltransferase, Histidyl-tRNA synthetase-like
           protein [Deinococcus geothermalis DSM 11300]
          Length = 395

 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 79/423 (18%), Positives = 134/423 (31%), Gaps = 72/423 (17%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           P+G  D    E   R  +   +  ++  +G+  +E P LE++        +    N   F
Sbjct: 28  PQGTRDVLPPEWAWREHLRTRLAGVFAAWGYRGVEVPALEFAS-------EAHPQNARAF 80

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP-GRFRQFIQ 130
            L D DG+ ++LR + T  + R V   F    FP R    G ++        GR R+F Q
Sbjct: 81  KLIDTDGEVLALRSEFTTAIGRLVQARFPEGPFPLRLQYGGRLWLRTLTSELGRLREFGQ 140

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+ +G +   ADAE+  +    L+ VG+      + +     +D +LE  GL    + 
Sbjct: 141 VGVELIGVATPQADAELLQLGTQALDTVGV---QAVMEVGYPGFVDAVLEDAGLPASAR- 196

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               +   +      +         L S     + +   +    
Sbjct: 197 ------------------NALHDAIDRKSGADVDLLAARHGLNSAVTATLHTLTDLYGGP 238

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +      +            L      +     ++  +       R   YYTG  + A 
Sbjct: 239 EVLAQAAALARGTRARAAVAHLEA-VAALYAPAPDAAGLLFDLGASRRYGYYTGITFRAY 297

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                            V GGGRYD           P  GF+IG       L+ L   T 
Sbjct: 298 AEGLNQ----------PVLGGGRYDLGGL-------PGAGFAIG-------LERLTEVTA 333

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ---LKYADRR 427
                 P ++  +D             +  R+ G+ AE+    +     Q   L Y  +R
Sbjct: 334 PQLPPEPEVVLALDRAG---------AEHARSLGLSAELAWTDN-----QVELLAYCQKR 379

Query: 428 NCP 430
              
Sbjct: 380 GIR 382


>gi|71908588|ref|YP_286175.1| ATP phosphoribosyltransferase regulatory subunit [Dechloromonas
           aromatica RCB]
 gi|109892207|sp|Q47BS6|HISZ_DECAR RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|71848209|gb|AAZ47705.1| tRNA synthetase, class II (G, H, P and S) [Dechloromonas aromatica
           RCB]
          Length = 384

 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 75/410 (18%), Positives = 131/410 (31%), Gaps = 56/410 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   LP   AD    E     R+  ++ + + + GF+ +  P+LEY +SL      + + 
Sbjct: 1   MNWLLPEYLADALPAEAARIERLRRTVLDHFRSRGFELVMPPMLEYLESLLTGAGQDLKL 60

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               F L D   G+ + +R D+T   AR  A +        R    G V           
Sbjct: 61  R--TFKLVDQLSGRTMGVRADITPQAARIDA-HLLNHQGVTRLCYCGNVLHTLPATISAG 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+ +Q   +  G +   AD ++  +MA   + + +      I + +  I   + E  GL 
Sbjct: 118 REPLQIGAELYGYAGIAADLDVIRLMAGAFDQIKLPI--RRIDLGHVGIFRALAEAAGLP 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + +                     V  LL         +    AN+ S   + +     
Sbjct: 176 QEAE-------------------DSVLSLLQTKDVPGLIEAC--ANVPSPYREALQRLPQ 214

Query: 246 IDLEKS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
           +      +      +    A       L  +       G       I  + +RG  Y+ G
Sbjct: 215 LYGGADVLERAAAELPPLPAITAALEGLRHLL-----VGAPELPFSIDLSDLRGYHYHNG 269

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+ A                 ++  GGRYDG    F  +  PATGFS+ +  +      
Sbjct: 270 VVFAAY----------CDGYPAAIALGGRYDGAGKAFG-RARPATGFSMDLREVARL--- 315

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGS 413
                     +G      +   +        +   LR  G I  E+  G 
Sbjct: 316 --------VTVGKSNGAILAPHAGQNKHLAAHIAALREQGEIVVELLHGE 357


>gi|326571196|gb|EGE21220.1| ATP phosphoribosyltransferase regulatory subunit [Moraxella
           catarrhalis BC7]
          Length = 430

 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 71/356 (19%), Positives = 141/356 (39%), Gaps = 26/356 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    + + +  + D++  +   +G+  +  PL+EY++SL     ++    +  
Sbjct: 26  LPDGVADVLFTDAQKQESLRDALLFVLTAHGYRLVSPPLIEYTESLLNNADED--LKRQT 83

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D  +G+ + LR D+T  + R  ++    I    R   +G V +    G    R  +
Sbjct: 84  FKFIDQLNGRLMGLRADITPQILRIDSKYGKGIS---RYCYVGQVVKTLPTGLFGLRTPL 140

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     A+ E+  ++    + +G+ R   H+ I +  I D + +  G+   D 
Sbjct: 141 QLGAEIFGIDDICAELELIDLLVALADEIGLDRQMLHVDIGHVAIFDRLCQLHGVSNKDA 200

Query: 190 LNER-LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                +   +A+ +L K+    +   L                L+S++I    + L+   
Sbjct: 201 DELIGIYHKKAMPELAKWCQN-IGNSLNSPSDATDFLVLAKHTLSSDRIPNAEALLNKLS 259

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +K+  +            +  NEL  ++  +R  G +   + I  T + G  Y+TG V+ 
Sbjct: 260 DKARQDNQ--------IIQAANELATLAAHIRAVGMS---VSIDVTELSGYHYHTGVVFN 308

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
           A LG      +       ++  GGR+DG+ +    +        I      V L+ 
Sbjct: 309 AYLGNRTTQTQ-------ALVRGGRFDGISTHSVARGATGFSMDINRLLEFVELEE 357


>gi|330817157|ref|YP_004360862.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           gladioli BSR3]
 gi|327369550|gb|AEA60906.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           gladioli BSR3]
          Length = 382

 Score = 94.5 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 78/395 (19%), Positives = 136/395 (34%), Gaps = 54/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL     ++       
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTGGGNDLHLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D+  G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDELSGRTLGLRADMTPQVARIDA-HLLNRQGVTRLCYAGNVLHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G       + + +  +L+ +           
Sbjct: 123 QIGAELYGHAGLEADLEVQQLMLDALRLTG--IGTIRLDLCHAGVLNALFS--------- 171

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D +     + +   L         + T+     +      +  L  D  
Sbjct: 172 ----------RDAVAAARGETLYGALAGKDVPLLNELTEDLGPDTRAALRALPHLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++  V+        + I    +RG  Y++G ++ A
Sbjct: 222 -VIDEARRQLPALPEITRALDDLAQLAAQVQ-----GAEVAIDLADLRGYAYHSGAMFSA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V  +V  GGRYD +   +  +  PATGFS         L   E + 
Sbjct: 276 YV----------DGVPNAVARGGRYDHVGQAYG-RARPATGFS---------LDLREIAR 315

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +  E     I       ++L         LR AG
Sbjct: 316 ISPIEARGTAILAPWRQDEALRVA---VAALRDAG 347


>gi|156539756|ref|XP_001599239.1| PREDICTED: similar to eukaryotic initiation factor eIF-2 alpha
            kinase; DGCN2, partial [Nasonia vitripennis]
          Length = 1477

 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 76/489 (15%), Positives = 150/489 (30%), Gaps = 57/489 (11%)

Query: 15   FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
                  K     N I   + N+++ +G   I TP       L                L 
Sbjct: 919  TNSLLPKYRFFYNNIKTKVVNVFQKHGGISINTP------LLMPKSGPLYSTTDSCVRLM 972

Query: 75   DDDGQWISLRYDLTAPLARYVAENFDTIVFPC--RTYRIGPVFRNEKHGPGRFRQFIQCD 132
               G  +S+ +DL AP ARYVA N  + +                          F    
Sbjct: 973  TRTGSIVSIPHDLRAPFARYVAWNNISSIRRYAIERVYREKKVHGFHPRELYECAFDIIS 1032

Query: 133  VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                   AE     +   + + +  +  +  ++ + IN+  +L  +L   G+  +   + 
Sbjct: 1033 PMPNNLMAEAELIFIAWEICNEIPQL--QERNFTVRINHTSLLQAVLMYCGIEREKYQDI 1090

Query: 193  RLIVLRAIDKLDKFGLQGVKLLLGEGR-TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
              I+  A D    F    V+  L     TD + +       T   +  + S L       
Sbjct: 1091 YSILCDARDGK--FSRFQVQTHLISLCLTDQAMETLFNLFETESSVAKIASVLKT----- 1143

Query: 252  MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                          ++G  E+ ++       G            V  ++ ++G +Y+   
Sbjct: 1144 --ITKRKGDAAALAKEGLREIEIVIANAEALGVKVKIFVNIVLNVYNIQQHSGIIYQITC 1201

Query: 312  GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG-----------QNVPATGFSIGISRLIV 360
                  ++++      +  GGRYD +++ F+                  G SI + +L  
Sbjct: 1202 EIK---KRRRRGGQEVIAAGGRYDKMLASFRQVLERTGMASKETKQFGVGISISLDKLAS 1258

Query: 361  ALKSL-ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFG 418
            A   L E    + K    V +  +D       +     + L +  +R   +   +++   
Sbjct: 1259 AACELSEDLCRDNKFAIDVAVCCVDGVPRREKELADVLRELWSLDLRVTCLDFSTTEEI- 1317

Query: 419  NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
              L+Y         ++               L  G++ S  I   E+W   R     I I
Sbjct: 1318 --LEYCRENGINHVVM---------------LKSGEKGSLRI---ETWERDRFQGRKISI 1357

Query: 479  SELVSTVKK 487
             ++    ++
Sbjct: 1358 QDVTEHFQR 1366


>gi|209542658|ref|YP_002274887.1| tRNA synthetase class II (G H P and S) [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530335|gb|ACI50272.1| tRNA synthetase class II (G H P and S) [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 381

 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 106/288 (36%), Gaps = 15/288 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF D    +       ++ +  ++  +G+  ++ PLLE+ D+L              F L
Sbjct: 15  GFVDLLPSDAEAEAAGMEDLMRVFATHGYSRVKPPLLEFEDTLL--SGSGAAVADQAFRL 72

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D D  + ++LR D+T  +AR  A     +  P R    G             RQ  Q  
Sbjct: 73  MDPDTRRMMALRPDITPQIARIAATRLADVPRPLRLSYTGLCVLASGGARESDRQISQAG 132

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           ++ +G  +  ADAE+  + A+ L  +G+    + + +        +   +    D    E
Sbjct: 133 IELIGPDSPQADAEIIALGAEGLAVLGVPGVSFDLTMP------SLAPALIAEIDYTPAE 186

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R  ++RA+D+ D   +      L  G      +    A      + ++   +  +  +++
Sbjct: 187 RQALMRALDRKDAAAV----ARLAGGLAPVLTELLHAAGPAERALAVLGGLVLPEPVRAL 242

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +   L     A +    ++ +  + V   G+  +     +   RG  
Sbjct: 243 SD--RLAATCAAIKARVPDIRLTVDPVEFRGWRYHTGVCVTVYARGQH 288


>gi|162148040|ref|YP_001602501.1| histidyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786617|emb|CAP56199.1| putative histidyl-tRNA synthetase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 393

 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 106/288 (36%), Gaps = 15/288 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF D    +       ++ +  ++  +G+  ++ PLLE+ D+L              F L
Sbjct: 27  GFVDLLPSDAEAEAAGMEDLMRVFATHGYSRVKPPLLEFEDTLL--SGSGAAVADQAFRL 84

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D D  + ++LR D+T  +AR  A     +  P R    G             RQ  Q  
Sbjct: 85  MDPDTRRMMALRPDITPQIARIAATRLADVPRPLRLSYTGLCVLASGGARESDRQISQAG 144

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           ++ +G  +  ADAE+  + A+ L  +G+    + + +        +   +    D    E
Sbjct: 145 IELIGPDSPQADAEIIALGAEGLAVLGVPGVSFDLTMP------SLAPALIAEIDYTPAE 198

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R  ++RA+D+ D   +      L  G      +    A      + ++   +  +  +++
Sbjct: 199 RQALMRALDRKDAAAV----ARLAGGLAPVLTELLHAAGPAERALAVLGGLVLPEPVRAL 254

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +   L     A +    ++ +  + V   G+  +     +   RG  
Sbjct: 255 SD--RLAATCAAIKARVPDIRLTVDPVEFRGWRYHTGVCVTVYARGQH 300


>gi|317488460|ref|ZP_07947011.1| tRNA synthetase class II core domain-containing protein
           [Eggerthella sp. 1_3_56FAA]
 gi|316912392|gb|EFV33950.1| tRNA synthetase class II core domain-containing protein
           [Eggerthella sp. 1_3_56FAA]
          Length = 216

 Score = 93.7 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 5/163 (3%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           +K  +    P GF D  + E  +R RI   ++  +   G+ PIETP LE  D +      
Sbjct: 30  RKRTMDYVTPAGFRDVLSDEACMRERIARDVQACFAARGYLPIETPTLEVMDVMRAGGRM 89

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR-NEKHG 121
              P    F   D  G  +++R D+T  +AR  A        P R   +  VFR  E   
Sbjct: 90  PGSP----FKFFDASGDLLAMRPDVTLQVARMCATRLAGQPGPFRFRYMQRVFREAEGRM 145

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
             + R+  Q  V+ +G +   ADAE+  +MA+ LE  G +   
Sbjct: 146 QAQAREMTQIGVECIGEAGPQADAEVVELMAEALELAGARGCK 188


>gi|319638104|ref|ZP_07992868.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria mucosa
           C102]
 gi|317400749|gb|EFV81406.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria mucosa
           C102]
          Length = 385

 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 72/411 (17%), Positives = 138/411 (33%), Gaps = 50/411 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           ++  +LP   AD      R      + +  ++  +G++ ++ PL+EYS SL   + D   
Sbjct: 1   MKSWQLPEHVADVLPINARQLESARERLLALFRVHGYELVQPPLMEYSHSLLTHI-DAGL 59

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +  +    G+ + +R D+T  +AR  A          R    G V      G    
Sbjct: 60  SLKTILVVDQLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGSVLHARPDGLLNM 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+ +Q   +  G     AD E+  +M  +++   +   +  + + +  +   +     L 
Sbjct: 120 REPLQAGAEMYGLEGIEADIELIDLMLKSMKIADM--GEVLLSLGHIGVFRALAHAAHLD 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                         +  +     + V  L+ E + D               +  +     
Sbjct: 178 EQKSAT-------LLSLMQDKDAEAVSQLVKEWKLDGMWAKAFSL------LPRL----- 219

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + +    E +    A     +EL  + +      + + ++ I  + +R   Y+TG 
Sbjct: 220 YGGREVLTLAREKLPELSAVSAALDELQAVCD-----AFPNQKVHIDLSELRVDNYHTGL 274

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           +Y A                 +V  GGRYDGL   F  +  PA GFS  +   I  L ++
Sbjct: 275 LYAAYGSNL----------HDAVARGGRYDGLGGYFG-RARPAAGFSFDLRSFIGRLPAI 323

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
              +             +  D   +   Q     LR  G    +  G   N
Sbjct: 324 GRES------------VVAVDVKDMPAAQEAVDALREQGQCVVIDYGIGYN 362


>gi|315048375|ref|XP_003173562.1| PEK/GCN2 protein kinase [Arthroderma gypseum CBS 118893]
 gi|311341529|gb|EFR00732.1| PEK/GCN2 protein kinase [Arthroderma gypseum CBS 118893]
          Length = 1590

 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 71/473 (15%), Positives = 149/473 (31%), Gaps = 57/473 (12%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ +   + D + +++  +G   +ET          +          G   L D  G  +
Sbjct: 992  ELLLHGMVKDKLTSLFRKHGA--VETS---RQSLFPRSS----HYGPGAVRLLDPGGNLV 1042

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
             L YDLT P AR + +   +I             V R E  G       I          
Sbjct: 1043 QLPYDLTLPNARALPKQDLSIEKAFSFGTVYRESVHRGEPRGHKEVDFDIVSYNTLDLPL 1102

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
             E    ++   + D    +  K +     +N+  +L+ ++    +  + +   + ++ + 
Sbjct: 1103 KEAEVIKVLDEIIDEFPPL--KSSQMCFHLNHSDLLEAVVAFCRITPEQRPIVKEVISKL 1160

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHELYEL 258
               + ++ +Q ++  L           +    ++S  ID +  F   D  EK++  L+ +
Sbjct: 1161 --NIGQYTMQKIRSELR----------SPSIGVSSTSIDDLSRFDFRDTPEKALSRLHAI 1208

Query: 259  VKGTIAGEK---GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
            + GT   ++    FN L ++   + K            + +    Y    +++ +     
Sbjct: 1209 MDGTEYADRLSPIFNRLNIVVSYLEKFKVKRKVYISPLSSLNDKFYNGSVLFQCVFDKKR 1268

Query: 316  MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN----- 370
             +             GGRYD L+  F+         S  +   +   K   S TN     
Sbjct: 1269 RD---------VFAAGGRYDSLIQEFQPILRSNRPRSHAVGFNLGLDKLNGSMTNYLKGS 1319

Query: 371  ------------NIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                        N        +     D     +        L    I AE+   ++ + 
Sbjct: 1320 NKSFLKPDVDVGNAWRKNKCDVLVASFDPSVLRTVGVGIVSTLWAHDISAELAADTTPSI 1379

Query: 418  GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             + L      N    +I       RG L++K + + ++      +   W    
Sbjct: 1380 EDLLSRYVDDNYSWVVIVKQDSIERG-LRVKSVQRKEDFDVRSSDLVPWLRNE 1431


>gi|90416486|ref|ZP_01224417.1| ATP phosphoribosyltransferase regulatory subunit, putative [marine
           gamma proteobacterium HTCC2207]
 gi|90331685|gb|EAS46913.1| ATP phosphoribosyltransferase regulatory subunit, putative [marine
           gamma proteobacterium HTCC2207]
          Length = 392

 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 6/189 (3%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +   +  ++   +   + ++Y  +G+D +  P++E++DSL      +       
Sbjct: 9   LPDGVDEVLPERAQVVEHLRRQLLDLYNCWGYDLVIPPMVEFTDSLLSGSGSDLDLM--T 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T   AR  A +      P R    G V      GP   R  I
Sbjct: 67  FRITDQLSGRMMGIRADITPQTARMDA-HSLRREGPSRLCYAGTVLHTRPRGPLESRTPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
              V+  G +   AD E+  ++  ++ + G+   + H+ + +  I  G+L   GL  D +
Sbjct: 126 SIGVELFGEATVAADIEVIELLLQSISSAGV--ENVHLDLGHVDIFRGLLADAGLSADSE 183

Query: 190 LNERLIVLR 198
                +V R
Sbjct: 184 AELFDLVQR 192


>gi|198283671|ref|YP_002219992.1| tRNA synthetase class II (G H P and S) [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218665624|ref|YP_002426302.1| ATP phosphoribosyltransferase regulatory subunit [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198248192|gb|ACH83785.1| tRNA synthetase class II (G H P and S) [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218517837|gb|ACK78423.1| ATP phosphoribosyltransferase regulatory subunit [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 400

 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 77/395 (19%), Positives = 139/395 (35%), Gaps = 40/395 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP GF D          R   ++ ++Y  +G+  +  PL+E+ +SL      +       
Sbjct: 12  LPSGFEDVLPARTEALERCRRALLDLYAQWGYRQVIPPLVEHLESLLTGSAADLDL--QT 69

Query: 71  FSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           + L D D G+ + LR D+T  +AR  A+   +     R    G V R      G  R   
Sbjct: 70  WKLLDQDSGRLVGLRSDMTPQMARIDAQ-TSSAKEVRRLSYAGTVLRARPDLLGGSRAPF 128

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G      D E+  +M ++L  +     D  + I +  I   + +  GL G  +
Sbjct: 129 QMGAELFGVEGAEGDLEVLSLMVESL--IHCAVPDLLLDIGHVGISQTLADAAGLEGALR 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGR--TDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +    V R            V+  L E     + + DF   + L  +            
Sbjct: 187 ADLLRHVER-------KAWSDVRTWLREHHCGMELTADFDALSGLQGD------------ 227

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
               + +    +    A     ++L  +  ++R   Y    I+   + + G  Y+TG ++
Sbjct: 228 -FDVLEQARRYLGHYPAVRAALDDLQRVWSVLRAR-YPDLAIQCDLSEIHGHRYHTGLLF 285

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                         P    ++  GGRYD + + F  +   ATGFS+ I  L++ L     
Sbjct: 286 SLF----------GPQRGEALASGGRYDDIGAAFGRR-RAATGFSLDIKPLLLGLPDSGR 334

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
                   G   +          + + +   +LR 
Sbjct: 335 IGRIWAPAGMDDLLWQSIQEHRRAGFVVLQDLLRQ 369


>gi|121610104|ref|YP_997911.1| class II tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|166219847|sp|A1WMN6|HISZ_VEREI RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|121554744|gb|ABM58893.1| tRNA synthetase, class II (G, H, P and S) [Verminephrobacter
           eiseniae EF01-2]
          Length = 382

 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 4/150 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +    YG++ +  PL+E+ +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLLDTARCYGYELVMPPLMEHLESLLTGTGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQLSGRSLGLRADTTPQVARIDA-HLLNRKGVTRLCYCGPVLHTRPDRPHATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           Q   +  G S   AD E   +  + L   G
Sbjct: 123 QFGAEIYGHSGLEADLEALQLARECLRVAG 152


>gi|323526568|ref|YP_004228721.1| histidyl-tRNA synthetase 2 [Burkholderia sp. CCGE1001]
 gi|323383570|gb|ADX55661.1| histidyl-tRNA synthetase 2 [Burkholderia sp. CCGE1001]
          Length = 383

 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 70/333 (21%), Positives = 123/333 (36%), Gaps = 43/333 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYIESLLTGGGHDLNLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGNVAHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+      + + +  +L  ++E      +  
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGL--GKVRLDLCHAGVLAALIEAEPAAAE-- 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +     D L    +  +  L               ANLT+   D + +  S+  +
Sbjct: 179 -----LGQSLYDALAGKDVPRLVEL--------------TANLTAVTRDALRALPSLYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S + E    +    A  +  ++L  ++  V         + I    +RG  Y++G ++ 
Sbjct: 220 ASVLDEARARLPNAPAIARALDDLAFLASQVE-----GAEVMIDLADLRGYAYHSGVMFS 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
           A +            V  +V  GGRYD +   +
Sbjct: 275 AYV----------DGVPNAVARGGRYDHVGQAY 297


>gi|170694789|ref|ZP_02885940.1| tRNA synthetase class II (G H P and S) [Burkholderia graminis
           C4D1M]
 gi|170140420|gb|EDT08597.1| tRNA synthetase class II (G H P and S) [Burkholderia graminis
           C4D1M]
          Length = 383

 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 78/396 (19%), Positives = 137/396 (34%), Gaps = 56/396 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYIESLLTGGGHDLNLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGNVAHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+      + + +  +L  ++E      +  
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGL--GKVRLDLCHAGVLAALIEAEPAAAE-- 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +     D L    +  +  L               ANL++   D + +  ++  +
Sbjct: 179 -----LGQSLYDALAGKDVPRLVEL--------------TANLSAVTRDALRALPALYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S + E    +    A  +  ++L  ++  V         + I    +RG  Y++G ++ 
Sbjct: 220 ASVLEEARARLPNAPAIARALDDLAFLASQVE-----GAEVMIDLADLRGYAYHSGVMFS 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +            V  +V  GGRYD +   +                   +L   E +
Sbjct: 275 AYV----------DGVPNAVARGGRYDHVGQAYGRARAAT----------GFSLDLREVA 314

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             +  E     I       D+L         LR AG
Sbjct: 315 RISPVEARSSAILAPWQHDDALRVS---VAALRDAG 347


>gi|78184658|ref|YP_377093.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           CC9902]
 gi|109892454|sp|Q3AXX8|HISZ_SYNS9 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|78168952|gb|ABB26049.1| Histidine--tRNA ligase [Synechococcus sp. CC9902]
          Length = 392

 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 60/413 (14%), Positives = 134/413 (32%), Gaps = 43/413 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D    ++     I + +  ++  +G+D +  P +E   +L          
Sbjct: 1   MALQPAAGARDLNPHQVETNRNITERLARVFRLWGYDEVSPPRVERMKTLMAGGA---IA 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +  L       + LR ++TA +AR       T   P R +  G VFR+     G   
Sbjct: 58  SRDIVRLV--ADDPLGLRPEMTASIARAACTRLATRPRPMRLWASGTVFRSRAADEGGQC 115

Query: 127 QFI--QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
                Q  V+  G +A  A+ E+  ++  ++ ++ +  +     +     L  ++  +  
Sbjct: 116 IEENLQSGVELFGVAAIEAEMELLSLLMASIASLKLGPSTQPRLLLGHTQLMELI--LSP 173

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           +   K +     L   D+L    ++                      L +E+  ++    
Sbjct: 174 YEGPKRDAVRWALVHFDRLAVETME---------------------LLPNERKTLLSLME 212

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                K + +    + G     +  + L  +    + +      +++  T     E YTG
Sbjct: 213 CRGTPKDVLQQLRHLFGQQPVFEDLDRLCSLLS--KTALEQDIALQLDPTFQPQFELYTG 270

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V++ +                 +  GGRYD LV R       A G    ++   +    
Sbjct: 271 LVFQLVCNGRS--------APVVLARGGRYDELVQRCGAPENQAFGAGFSLAIDPI---R 319

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                +   +     +      + +L     + Q     G  A + L   ++ 
Sbjct: 320 ELLVEDESAKADTTDVLVAYSSNSNLETALDHQQQWHAKGHSAVLELQPIRSM 372


>gi|255319663|ref|ZP_05360872.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           radioresistens SK82]
 gi|262378540|ref|ZP_06071697.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           radioresistens SH164]
 gi|255303280|gb|EET82488.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           radioresistens SK82]
 gi|262299825|gb|EEY87737.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           radioresistens SH164]
          Length = 388

 Score = 93.4 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 73/405 (18%), Positives = 144/405 (35%), Gaps = 50/405 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ +I  ++     +   + G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQIIEKLRRKALDFLVSRGYQLVYTPFIEYIESLSSLSEANQDLDLAT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   +    R    G V   +  G    R  +
Sbjct: 69  FKVIDQLTGRLLGIRADMTPQVARIDA-HVRPVEGVARYCYAGTVLHTKPQGFSATRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  GS +  AD EM  +M   ++  G+     H+ + +  +   ++++  L+   +
Sbjct: 128 QLGAELFGSESIDADVEMVDLMISLIQKAGLTDG-IHLDLGHVGLFRSLVKQAALNKATE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    +T + G         +  +  + + LS ++ 
Sbjct: 187 HQLSDLYQR----------KALPELAEFTQTLHFGSDFYVLGRYASDLGALEANLSAEIL 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K             A ++ F+ +      ++   + +  I I    +R   Y+TG +Y  
Sbjct: 237 K-----------NAAFKQAFDAVKTTQSEIQAR-WPNLHIGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F          + G S  + AL +     
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHF-----GRARPATGFSCDLYALSA----- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               +   + I      +D+        + LRT G+     LG  
Sbjct: 325 ---GQFNELSIVVAPKGTDT--DLLKMIERLRTEGLSVVQLLGQD 364


>gi|160900442|ref|YP_001566024.1| tRNA synthetase class II (G H P and S) [Delftia acidovorans SPH-1]
 gi|229464974|sp|A9BMU4|HISZ_DELAS RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|160366026|gb|ABX37639.1| tRNA synthetase class II (G H P and S) [Delftia acidovorans SPH-1]
          Length = 382

 Score = 93.4 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 137/396 (34%), Gaps = 56/396 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +    YG++ +  P+LEY +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLLDTARGYGYELVMPPMLEYLESLLTGTGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  CKLIDQLTGRTMGLRADTTQQVARIDA-HLLNRKGLTRLCYCGPVVHARPDRPRATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     AD E   +  D L + G+   + ++ + + +I+  +L  + +     
Sbjct: 123 QFGAEIYGHQGMEADLEALHLALDCLRSAGVT--NINVDLADVRIVRSLLAGVMVD---- 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                             L+GV   L           T+     +   + +++ L +   
Sbjct: 177 ---------------MQVLRGVHAALAAKDASELERLTRDFP--AASREGLMALLQLYGG 219

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +    +L+  T   +   ++L  +++ +         +      +RG  YY+G  + 
Sbjct: 220 IEVLDRAEKLLARTAGVQPLLDQLRWLAQRLE-----GVSVSFDLADLRGYAYYSGTRFA 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +          P    ++  GGRYD + + F  +N PA GFS+ I +L+  +      
Sbjct: 275 IYV----------PGASDALVRGGRYDEVGAVFG-RNRPAAGFSLDIKQLVAVVPERPLK 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                            D   ++        LR  G
Sbjct: 324 AAIRAPW---------GDDPQVAAAIA---ALRRQG 347


>gi|46579756|ref|YP_010564.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|81830448|sp|Q72CD8|SYP_DESVH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|46449171|gb|AAS95823.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233547|gb|ADP86401.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 574

 Score = 93.4 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 62/543 (11%), Positives = 130/543 (23%), Gaps = 80/543 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R  N++   +R      G   +  P+++ +D L +     +  
Sbjct: 31  MIRKLTSGIYTFMPMGLRALNKVAAIVREEMNRAGAQEVLMPMVQPAD-LWQETGRWEFY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +   +D + +   L         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRFRDRNDRDYCLGPTHEEVITDLVRGEVRSYRQLPINLYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D   S  + +   M          +G+    +     +   + G  
Sbjct: 150 MRGREFVMKDAYSFDRDQSGCDESYKAMYAAYQRIFSRLGL---RFRAVEADSGSIGGSF 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV---------KLLLGEGRTDNSGDFTKGA 230
               +   D   + L V  A +         V            L E  T  +    + +
Sbjct: 207 SHEFMVLADTGEDTLAVCTACEYAANVERAEVTGTPCTRPAAAALAEVPTPGAHTIEEVS 266

Query: 231 NLTSEQIDIMVSFLSIDLEKS-----MHELYELVKGTIAGEKGFNELV-VISELVRKSGY 284
                  D++V  L    +       +    EL +  +    G + L     E V     
Sbjct: 267 AFLGVPADMLVKTLLFVADGEPVAALVRGDRELNEVKLKNLLGADSLELATPEQVEAWTG 326

Query: 285 NSNRIKISSTIVRGLEYYTGCVY----EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                     +      +           I+G    +   + V          Y  L   
Sbjct: 327 APVGFAGPVGLHGVKRVFADTELKGDAGWIVGANKADTHLREVSLTRDAAIEAYADLRMI 386

Query: 341 FKGQNVPATGFSIGISRLIVA------------------LKSLESSTNNIKEMGPVLI-- 380
                 P  G ++ + + I                    L         +     + +  
Sbjct: 387 TASDPCPRCGGAVELPKGIEVGHVFKLGLKYSKSMNATFLDENGKEQVMVMGCYGIGVSR 446

Query: 381 --------------TTMDHDSDSLSKYQMYT---------------QMLRTAGIRAEMFL 411
                                       +                   L   G    +  
Sbjct: 447 VVASCIEQNNDGDGIVFPPPIAPYEVALLLLDPKNEEAAAKAAEIESFLEAEGHDVLLDD 506

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
              +  G + K AD    P  ++ G    +RG+++ K+   G++    ++          
Sbjct: 507 RDER-PGVKFKDADLIGSPYQLVLGGKGLARGVVEAKNRRSGEKTELPVEGFAEAFRDWR 565

Query: 472 AQI 474
           A +
Sbjct: 566 AGV 568


>gi|241760029|ref|ZP_04758127.1| histidine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319483|gb|EER55913.1| histidine--tRNA ligase [Neisseria flavescens SK114]
          Length = 385

 Score = 93.4 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 72/411 (17%), Positives = 139/411 (33%), Gaps = 50/411 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           ++  +LP   AD      R      + +  ++  +G++ ++ PL+EYS SL   + D   
Sbjct: 1   MKSWQLPEHVADVLPTNARQLESARERLLALFRVHGYELVQPPLMEYSHSLLTHI-DAGL 59

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +  +    G+ + +R D+T  +AR  A          R    G V      G    
Sbjct: 60  SLKTILVVDQLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGSVLHARPDGLLNM 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+ +Q   +  G     AD E+  +M  +++   +   +  + + +  +   +     L+
Sbjct: 120 REPLQAGAEMYGLEGIEADIELIDLMLKSMKIADM--GEVLLSLGHIGVFRALANAAHLN 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                         +  +     + V  L+ E + D               +  +     
Sbjct: 178 EQQSAT-------LLSSMQDKDAEAVSQLVKEWKLDGMWAKAFSL------LPRL----- 219

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + +    E +    A     +EL  + +      + + ++ I  + +R   Y+TG 
Sbjct: 220 YGGREVLTLAREKLPELSAVSVALDELQAVCD-----AFPNQKVHIDLSELRVDNYHTGL 274

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           +Y A                 +V  GGRYDGL   F  +  PA GFS  +   I  L ++
Sbjct: 275 LYAAYGSN----------RHDAVARGGRYDGLGGYFG-RARPAAGFSFDLRSFIGRLPAI 323

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
              +             +  D   +   Q     LR  G    +  G   N
Sbjct: 324 GRES------------VVAVDVKDMPAAQEAVDALREQGQCVVIDYGIGYN 362


>gi|317484633|ref|ZP_07943536.1| prolyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924107|gb|EFV45290.1| prolyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 574

 Score = 93.4 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 61/537 (11%), Positives = 148/537 (27%), Gaps = 86/537 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R  N+  + +R   +  G   I  P ++ +D L +     +  
Sbjct: 31  MIRKLTSGIYTWLPLGLRTLNKAANIVREEMDRAGAQEILMPTVQPAD-LWRESGRWEHY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +   +D   +   L         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRFKDRHERDYCLGPTHEEVVTDLIRGEVRSYRQLPMNLYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D   + A+ +  +M          + +    +     +   + G  
Sbjct: 150 MRGREFLMKDAYSFDRDDAGADISYKKMFEAYKKIFSRMAL---QFRPVEADSGSIGGNF 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGL----------QGVKLLLGEGRTDNSGDFTKG 229
               +   +   + +      D                 +     + E  T +     + 
Sbjct: 207 SHEFMVLAETGEDTIAYCTGCDWSANIERAAVLPPAKACEETCSAIEEVTTPDQHTIEEV 266

Query: 230 ANLTSEQIDIMVSFLS-----------IDLEKSMHELYELVKGTIAGEK----------- 267
                     ++  L            +  ++ ++E+   +K     ++           
Sbjct: 267 CGFLKVPAQKLIKTLLYVVDGKPVAALVRGDRELNEIK--LKNYFKADEVVLASPEQVTQ 324

Query: 268 --------------------GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                                 +EL+  ++ +  +      I       R +  +     
Sbjct: 325 WTNAPVGFAGPVGFTAGPIVADHELMADTDWIAGANKADTHILHVDLK-RDVPAFAYADL 383

Query: 308 EAILGFPVMNEKQKPVVF-------GSVGGGGRYDGLVSRFKGQNVP------ATGFSIG 354
            +I    V     KPV F            G +Y   ++                 + IG
Sbjct: 384 RSIAEGDVCPRCGKPVAFAKGIEVGHVFKLGTKYSTALNAIYLDENGKEQTIIMGCYGIG 443

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           +SR++ A           +    +      L+     ++D+ +K      +L   G+   
Sbjct: 444 VSRVVAACIEQNNDGDGIAFPPPLAPFDLELLNLDPKNADTAAKADELYDLLTGMGLDVL 503

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +     +  G + K AD    P+ ++ G    +RG++++K+   G++    ++    
Sbjct: 504 LDDREER-PGVKFKDADLVGLPMQVVVGGKGLARGIVEVKNRKTGEKGELPVEGFAE 559


>gi|83643989|ref|YP_432424.1| histidyl-tRNA synthetase-related protein [Hahella chejuensis KCTC
           2396]
 gi|83632032|gb|ABC27999.1| histidyl-tRNA synthetase-related protein [Hahella chejuensis KCTC
           2396]
          Length = 209

 Score = 93.4 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 3/136 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G         + R  +L+ +  + E  GF+ +  P +E S        +E      ++ 
Sbjct: 10  KGVRIISGDTAKKRRVLLNQMIALAEASGFEEVILPSIEPSQVYVDKAGEEILG--QMYV 67

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             D  G+ + LR + TA   + VA+         R +     +R E+   GR+R+F Q  
Sbjct: 68  FPDKKGRSLCLRPEGTA-TVQMVADKHFKRRKNVRLWYFERCWRYERPQEGRYREFFQFG 126

Query: 133 VDNVGSSAETADAEMC 148
           V+ +  +  T   E+ 
Sbjct: 127 VEVINPTTPTVRQELI 142


>gi|209965015|ref|YP_002297930.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Rhodospirillum centenum SW]
 gi|229464984|sp|B6INM0|HISZ_RHOCS RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|209958481|gb|ACI99117.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Rhodospirillum centenum SW]
          Length = 386

 Score = 93.4 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    +     R++  +   +  +G++ ++ PL+E+ + L           K  
Sbjct: 13  LPAGLRDLLPPDAEHEARVVGRLMKEFTRHGYERVKPPLIEFEEGLLSGPGRA--LAKQT 70

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D    Q + +R D+T  +AR  A        P R    G V R +       RQF 
Sbjct: 71  FRLMDPISQQMMGVRSDMTLQVARIAATRMPKSPRPLRLSYAGQVLRVKGTQLRPERQFG 130

Query: 130 QCDVDNVGSSAETAD 144
           Q  V+ +G     AD
Sbjct: 131 QVGVELIGGMQVEAD 145


>gi|319763703|ref|YP_004127640.1| histidyl-tRNA synthetase 2 [Alicycliphilus denitrificans BC]
 gi|330824034|ref|YP_004387337.1| histidyl-tRNA synthetase 2 [Alicycliphilus denitrificans K601]
 gi|317118264|gb|ADV00753.1| histidyl-tRNA synthetase 2 [Alicycliphilus denitrificans BC]
 gi|329309406|gb|AEB83821.1| histidyl-tRNA synthetase 2 [Alicycliphilus denitrificans K601]
          Length = 382

 Score = 93.0 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 4/148 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +   +YG++ +  PLLE+ DSL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLLDTARSYGYELVMPPLLEHLDSLLTGTGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQLSGRSLGLRADTTQQVARIDA-HLLNRRGVTRLCYCGPVLHTRPDRPHATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEA 157
           Q   +  G     AD E  ++  + L +
Sbjct: 123 QFGAEIYGHPGIEADIEAVLLSLECLRS 150


>gi|295674781|ref|XP_002797936.1| serine/threonine-protein kinase gcn2 [Paracoccidioides brasiliensis
            Pb01]
 gi|226280586|gb|EEH36152.1| serine/threonine-protein kinase gcn2 [Paracoccidioides brasiliensis
            Pb01]
          Length = 1535

 Score = 93.0 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 64/435 (14%), Positives = 126/435 (28%), Gaps = 37/435 (8%)

Query: 46   ETP------LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF 99
             TP       +E + SL    P  +    GV  L D  G  + L YDLT P AR ++   
Sbjct: 969  RTPPVSEHGAVETTRSLL--FPRSEHYPSGVVRLLDPAGNLVQLPYDLTLPNARSISRLD 1026

Query: 100  DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +I        +     +                 N           M +M     E   
Sbjct: 1027 SSIEKTFTFGTVYRESIHGGAPRCHQEVDFDMISHNTLDLTLKEAEVMKVMDEILNEFPS 1086

Query: 160  IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
            ++       IN+  +LD I+    +    K   + I+ +    +  + +Q ++  L    
Sbjct: 1087 LRSVPMCFHINHSDLLDAIMAFCRISPQQKPVVKEILSKL--NVGPYTMQKIRSELR--- 1141

Query: 220  TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                   +    + S  ID +  F   D      +  + +   + G +  + L  I   +
Sbjct: 1142 -------SPTVGIASTSIDDLSRFDFRDSP---DKALKRLLAIMEGTEYADRLAPIFARL 1191

Query: 280  RKSGYNSNRIK-ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
                             V  L       +   + F  +++                  + 
Sbjct: 1192 NAVVSYLKGFHVKRKIYVNPLSSLNDKFFRGSILFQCVSD----------TKRRDRHAVG 1241

Query: 339  SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYT 397
                 + +  +  +         LK  E+  + I       +     D+    +      
Sbjct: 1242 FNLGWEKLCLSMSNHLKGSNKAFLKHAEAEISGIWRSRRCDVLVASFDATVLRTVGVGVI 1301

Query: 398  QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            Q L   GI AE+ + +S +    L      +    +I       RG L++K+++  +E  
Sbjct: 1302 QELWAHGISAELSVDTS-SLEEILSRYRNDSHSWVVIVKQDSMERG-LKVKNISTKEEFE 1359

Query: 458  REIKNNESWREARVA 472
                    W    + 
Sbjct: 1360 VRSSELAGWLRGEIG 1374


>gi|228476842|ref|ZP_04061487.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           salivarius SK126]
 gi|228251416|gb|EEK10561.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           salivarius SK126]
          Length = 326

 Score = 93.0 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 73/361 (20%), Positives = 137/361 (37%), Gaps = 48/361 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T     L  G  D   K  R   +I   I ++    GF  IETP LE+ +      
Sbjct: 1   MKKTT-----LALGMHDKLFKRARTMYQIEHRICDLLMTKGFLRIETPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D  + G ++  D +G  +SLR D+T+ + R +A     +  P +    G VF   + 
Sbjct: 52  --SDVVDNGNYNFFDKNGDLVSLRPDITSQIGRVIAS--TQVHTPIKFSYSGKVFNYNEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G     A  E  +   + L+A G+K  +Y    ++ ++L  I E
Sbjct: 108 MRGLSNEHTQAGIEIIGFPVHQAMEEAVISAKEALDAAGVK--NYKFEFSHARLLQLIFE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++ L    +                     +   + +       +FTK      +++   
Sbjct: 166 ELDLPAVKEA-------------------ELAAYIRDKSITGLKEFTKENPSQYDKVLEQ 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +    +++  E +  + A     + L V++  +     +     +    +  + 
Sbjct: 207 LPFLFGETTTVLNKARE-LTDSEAFLTALDSLEVLTNRLAD---SLPETTLDLAQLPAVP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++               V  +   GGRYD L  RF    + A G++I +  +  
Sbjct: 263 YYTGMMFKVF----------GDKVPDAFVSGGRYDKLFERFGATELTAVGWAIDVDSVYQ 312

Query: 361 A 361
           A
Sbjct: 313 A 313


>gi|161524645|ref|YP_001579657.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           multivorans ATCC 17616]
 gi|189350598|ref|YP_001946226.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           multivorans ATCC 17616]
 gi|221212780|ref|ZP_03585756.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           multivorans CGD1]
 gi|229464968|sp|A9AH05|HISZ_BURM1 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|160342074|gb|ABX15160.1| tRNA synthetase class II (G H P and S) [Burkholderia multivorans
           ATCC 17616]
 gi|189334620|dbj|BAG43690.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           multivorans ATCC 17616]
 gi|221166993|gb|EED99463.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           multivorans CGD1]
          Length = 382

 Score = 93.0 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 65/332 (19%), Positives = 116/332 (34%), Gaps = 41/332 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLCHAGVLAALL---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D       + +   L         + T      +      +  L  D  
Sbjct: 171 ---------ARDTQAAARGEALYDALSGKDVPLLNELTDDLGADTRAALRALPHLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E  + +       +  ++L  ++   +        + I    +RG  Y++G ++ A
Sbjct: 222 -VLDEARQRLPALPEIARALDDLAQLAAQAK-----GVEVAIDLADLRGYAYHSGAMFTA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            +            V  ++  GGRYD +   +
Sbjct: 276 YI----------DGVPNAIARGGRYDHVGQAY 297


>gi|221198070|ref|ZP_03571116.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           multivorans CGD2M]
 gi|221204372|ref|ZP_03577389.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           multivorans CGD2]
 gi|221175229|gb|EEE07659.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           multivorans CGD2]
 gi|221182002|gb|EEE14403.1| ATP phosphoribosyltransferase, regulatory subunit [Burkholderia
           multivorans CGD2M]
          Length = 382

 Score = 93.0 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 65/332 (19%), Positives = 116/332 (34%), Gaps = 41/332 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLCHAGVLAALL---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D       + +   L         + T      +      +  L  D  
Sbjct: 171 ---------ARDTQAAARGEALYDALSGKDVPLLNELTDDLGADTRAALRALPHLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E  + +       +  ++L  ++   +        + I    +RG  Y++G ++ A
Sbjct: 222 -VLDEARQRLPALPEIARALDDLAQLAAQAK-----GAEVAIDLADLRGYAYHSGAMFTA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            +            V  ++  GGRYD +   +
Sbjct: 276 YI----------DGVPNAIARGGRYDHVGQAY 297


>gi|330886604|gb|EGH20265.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 229

 Score = 92.6 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 82/212 (38%), Gaps = 13/212 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
                      D L +  +  V  L  +   +
Sbjct: 184 QQ-------LFDALQRKAIDEVVALTADLPQE 208


>gi|260434406|ref|ZP_05788376.1| ATP phosphoribosyltransferase, regulatory subunit [Synechococcus
           sp. WH 8109]
 gi|260412280|gb|EEX05576.1| ATP phosphoribosyltransferase, regulatory subunit [Synechococcus
           sp. WH 8109]
          Length = 392

 Score = 92.6 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 65/409 (15%), Positives = 135/409 (33%), Gaps = 45/409 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++    ++ + + ++Y  +G+D +  P +E   +L          
Sbjct: 1   MALQPAAGAKDLNPRQVETNRQLTERLASVYRLWGYDEVSPPRVERLATLMAGGA---ID 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  +  L       + LR ++TA +AR     F     P R +  G VFR      G   
Sbjct: 58  SSDIVRLV--ADDPLGLRPEMTASIARAACTRFADRQRPLRLWASGTVFRTRSADEGGQC 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                           ++AEM ++                       +L   ++ + L  
Sbjct: 116 IEENLQSGVELFGVSGSEAEMELL----------------------SLLLASVQTLELQA 153

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K    L     +D + +     V+  +     D      +  +L   +   ++S L  
Sbjct: 154 SQKPRLLLGHTALMDLVLRPFSGAVRDQIRTALIDFDRLAIESFDLADAEKTRLLSLL-- 211

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELV-RKSGYNSNRIKISSTIVRGLEYYTGC 305
           D   +  ++   +      +  F+EL  +   +   +   +  I++  T     E YTG 
Sbjct: 212 DCRGTPDQVLTKLGSLCGEQPVFDELRRLCAHLASAAQAQAVTIQLDPTFQPHFELYTGL 271

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN--VPATGFSIGISRLIVALK 363
           V++ +                 +  GGRYD LV R    +      GFS+ I  +   + 
Sbjct: 272 VFQLVC--------DGRSSPVVIARGGRYDDLVHRCGATDDRAFGAGFSLAIDPIRELIS 323

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
            L+++  +  +     +      + +L       +     G  A M L 
Sbjct: 324 DLDAAKQHQSD-----VLVAFSTASNLESAMERQRSWHEQGRTAVMALE 367


>gi|289672588|ref|ZP_06493478.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. syringae FF5]
          Length = 229

 Score = 92.6 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 82/212 (38%), Gaps = 13/212 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
                      D L +  +  V  L  +   +
Sbjct: 184 QQ-------LFDALQRKAIDEVIALTADLPPE 208


>gi|312865343|ref|ZP_07725571.1| tRNA ligase class II core domain (G, H, P, S and T) [Streptococcus
           downei F0415]
 gi|311099454|gb|EFQ57670.1| tRNA ligase class II core domain (G, H, P, S and T) [Streptococcus
           downei F0415]
          Length = 324

 Score = 92.6 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 79/361 (21%), Positives = 137/361 (37%), Gaps = 48/361 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T     LP G  D   K      R+   I ++    GF+ IETP +E+ +  G   
Sbjct: 1   MKKTT-----LPVGMHDKLFKRATTTYRLERDISDLLMEQGFNRIETPTMEHFEVFG--- 52

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D+     + L D  G  +SLR D+T+ + R +A     +  P +    G VF++ + 
Sbjct: 53  ---DQLKPNHYHLFDKTGDLLSLRPDITSQIGRVIAS--TKVETPIKFSYSGKVFKSNEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  V+ VG  A+ A  E  +     L+  G+K   +    ++  IL  I E
Sbjct: 108 LRGLLNEHTQAGVEIVGFPADKALKEAVLTAKSALDVAGVKVYQFE--FSHATILQTITE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +                    LD   L+ ++  + E        FT+      + +   
Sbjct: 166 TL-------------------NLDGNSLEVLRTAILEKNITGLNSFTQAHPSEFDDLLAE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +  + +     LVK   A      +L     +++       +  +    V  + 
Sbjct: 207 LPFLFGESHQVLARARRLVK-NPAVLAALADLE---AILQDIHRFLPQTTVDLAQVPSMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++             P V  +   GGRYD L  RF  + + A G+++ +  +  
Sbjct: 263 YYTGMMFKVF----------GPHVPDAFVSGGRYDKLFERFGAKELTAVGWAVDLDSVYQ 312

Query: 361 A 361
           A
Sbjct: 313 A 313


>gi|301066483|ref|YP_003788506.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus casei str. Zhang]
 gi|300438890|gb|ADK18656.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus casei str. Zhang]
          Length = 382

 Score = 92.6 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 72/352 (20%), Positives = 123/352 (34%), Gaps = 38/352 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D        +  ++ +I   +   GF+ ++TPLLEY D         ++P    
Sbjct: 6   LPIGTRDEFGPRAIRKENLIQTISQQFIQAGFERVKTPLLEYRDVFKPLAVSGEQP---- 61

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + + DD G+ + +R DLT PLAR ++    +IV P + + +G +FR +K   G + Q  Q
Sbjct: 62  YQMLDDAGESVVMRPDLTLPLARLLST--TSIVPPVQWWYVGDIFRVKKSLSGTYNQITQ 119

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G  +  A+             +G+                     + L     +
Sbjct: 120 AGIELIGYRSLKAEWACLSEAGKICRTLGLTHLT-----------------LELSDAQFV 162

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            + L  L+  D                   D              Q      +L  D E 
Sbjct: 163 PQILRTLQLNDAAADAFQTAFFAKELSTYQDLIAPLATNPLYPFLQQ---WPWLFGDSET 219

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              EL  L+            L      ++   +   R+ I  T      YYTG  + A 
Sbjct: 220 IFAELKRLLPSN-VITDRLAPLQQTVAFLKDQ-FPELRVTIDLTSRPPQSYYTGIFFHAY 277

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +                +  GGRYD L++ F+ + +PA G +  I  +   L
Sbjct: 278 V----------DGGHQYLFSGGRYDKLLASFQQELLPAVGLAFDIDAVTDQL 319


>gi|239631479|ref|ZP_04674510.1| ATP phosphoribosyltransferase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239525944|gb|EEQ64945.1| ATP phosphoribosyltransferase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 382

 Score = 92.6 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 72/352 (20%), Positives = 123/352 (34%), Gaps = 38/352 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D        +  ++ +I   +   GF+ ++TPLLEY D         ++P    
Sbjct: 6   LPIGTRDEFGPRAIRKENLIQTISQQFIQAGFERVKTPLLEYRDVFKPLAVSGEQP---- 61

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + + DD G+ + +R DLT PLAR ++    +IV P + + +G +FR +K   G + Q  Q
Sbjct: 62  YQMLDDAGESVVMRPDLTLPLARLLST--TSIVPPVQWWYVGDIFRVKKSLSGTYNQITQ 119

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G  +  A+             +G+                     + L     +
Sbjct: 120 AGIELIGYRSLKAEWACLSEAGKICRTLGLTHLT-----------------LELSDAQFV 162

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            + L  L+  D                   D              Q      +L  D E 
Sbjct: 163 PQILRTLQLNDAAADAFQTAFFAKELSTYQDLIAPLATNPLYPFLQQ---WPWLFGDSET 219

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              EL  L+            L      ++   +   R+ I  T      YYTG  + A 
Sbjct: 220 IFAELKRLLPSN-VITDRLAPLQQTVAFLKDQ-FPELRVTIDLTSRPPQSYYTGIFFHAY 277

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +                +  GGRYD L++ F+ + +PA G +  I  +   L
Sbjct: 278 V----------DGGHQYLFSGGRYDKLLASFQQELLPAVGLAFDIDAVTDQL 319


>gi|330993270|ref|ZP_08317206.1| ATP phosphoribosyltransferase regulatory subunit [Gluconacetobacter
           sp. SXCC-1]
 gi|329759672|gb|EGG76180.1| ATP phosphoribosyltransferase regulatory subunit [Gluconacetobacter
           sp. SXCC-1]
          Length = 383

 Score = 92.6 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 4/160 (2%)

Query: 1   MGKKTKLRAEL-PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M         L P GF D    E       ++++  ++  +G+D +  PLLE+ ++L   
Sbjct: 1   MTDDPPFNPALLPAGFVDRLPPEAEAEAAGVETLMRVFAAHGYDRVTAPLLEFEETLL-- 58

Query: 60  LPDEDRPNKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
                   +  F L D D  + ++LR D+T  +AR  A     +  P R    GP     
Sbjct: 59  SGSGAAVAEQTFRLMDPDTRRMMALRPDITPQIARIAATRLPDVPRPLRLAYAGPCVLMA 118

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
            +     RQ  Q  V+ +G     ADAE+  + A+ L  +
Sbjct: 119 ANRGEGDRQISQAGVELIGPDRPEADAEIIAIAAECLATL 158


>gi|322420273|ref|YP_004199496.1| prolyl-tRNA synthetase [Geobacter sp. M18]
 gi|320126660|gb|ADW14220.1| prolyl-tRNA synthetase [Geobacter sp. M18]
          Length = 573

 Score = 92.6 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 58/533 (10%), Positives = 129/533 (24%), Gaps = 86/533 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R   ++   +R      G   +  P ++ ++ L K     D  
Sbjct: 31  MIRKLAAGIYNYLPLGLRSIRKVEQIVREEMNRAGAIELLMPAVQPAE-LWKESGRWDFY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +   +D       +         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRFKDRKDAEFCMGPTHEEVITDLIRKEIRSYRQMPINLYQIQGKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D   + A+ +  +M        E  G+K                  
Sbjct: 150 MRGREFIMKDAYSFDVNEAGADVSYEKMYKAYRRIFERCGLKFRAVEADTGTIGG--NYS 207

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +  +  D   +  +         +    +  +    E       +         + I+ 
Sbjct: 208 HEFMVLADSGEDAIVSCSCCEYAANMEKAETKRSEAVEHADPRPMEHVATPG--QKSIED 265

Query: 240 MVSFLSIDL--------------------EKSMHELYELVKGTIAGEKG-FNELVVISEL 278
           + +FL ++                               +K  +   +    E  V+ ++
Sbjct: 266 VSAFLGVNNTQVVKTLVLVADGEPVVALLRGDYDLNEIKLKNHLGATEIEMAEDDVVLKI 325

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
                  +  + +   +    +     ++  + G    +   K V  G       Y  + 
Sbjct: 326 TGAPTGYAGPVGLIGKVKVVADLSLQGMHNFVTGANAADTHLKNVNIGRDFEVEGYVDIR 385

Query: 339 SRFKGQNVPAT--------------------------------------------GFSIG 354
           +   G   P                                               + IG
Sbjct: 386 NVVIGDACPRCESGKLEIWRGIEVGHVFKLGTKYSKALNASFLDANGKEQIIFMGCYGIG 445

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           I R + A                I     ++      + +  +  +     L  AG+   
Sbjct: 446 IGRTVAACIEQNHDENGIIFPIPIAPFHCIVSALSAKEDEVKAASEQIYSELLEAGVEVL 505

Query: 409 MFL-GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           +        F    K AD    PL ++ G      G +++K+   G+     I
Sbjct: 506 LDDRDERPGFK--FKDADLIGIPLRLVVGAKNLVDGKVELKERRSGEVEILPI 556


>gi|242793574|ref|XP_002482192.1| protein kinase (Gcn2), putative [Talaromyces stipitatus ATCC 10500]
 gi|218718780|gb|EED18200.1| protein kinase (Gcn2), putative [Talaromyces stipitatus ATCC 10500]
          Length = 1588

 Score = 92.6 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 87/512 (16%), Positives = 161/512 (31%), Gaps = 70/512 (13%)

Query: 10   ELPRGFADCP----------TKEIRIRNRILDSIRNIYENYGFDPIET---PLLEYSDSL 56
            + P+ F D              E+ IR  + + +  I+  +G   +ET   P+       
Sbjct: 969  QSPKKFEDLTWDMDSRGNPGANEMLIRGLVKEKLIQIFRRHGA--VETTRQPVF------ 1020

Query: 57   GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAEN--FDTIVFPCRTYRIGPV 114
                P       GV  L D  G  + L +DLT P AR +          F          
Sbjct: 1021 ----PRSGHYQNGVVKLLDTSGNMLQLPFDLTLPNARAIPRQDPSLEKTFSFGRVYRESP 1076

Query: 115  FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
               E          I        +  E    ++   + +T   +          IN+  +
Sbjct: 1077 HGGEPRSHREADFDIVSYNTLDLALKEAEVIKVLDEIIETFPVLRSVP--MCFHINHSDL 1134

Query: 175  LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
            L  I+E   +        + I+ R    + K+ +Q ++  L           +    + S
Sbjct: 1135 LQLIMEFCRITAAQMPVTKEILSRL--NVGKWTMQKIRSELR----------SPTIGVAS 1182

Query: 235  EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
              +D +  F   D  + + +  +++   + G +  + L  I   ++      N   I   
Sbjct: 1183 TSLDDLARFDFRDTPEKVQQKLQII---MEGTEFADRLPPIFARIKSLVSYINGFGIKRK 1239

Query: 295  -IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR------FKGQNVP 347
              V  L       +   + F  + + ++  VF     GGRYD L+        +      
Sbjct: 1240 VYVNPLASLNDKFFRGSILFQCIFDGKRRDVF---AAGGRYDRLIQEFSPKLLYSRSQAH 1296

Query: 348  ATGFSIGISRLIVAL------------KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-Q 394
            A GF++   RL  ++            K  E+            +     D   L     
Sbjct: 1297 AVGFNLSWDRLSSSMIDYITNSAKTFTKHNEADVEGFWRTRRCDVLVASFDPTVLRTLGV 1356

Query: 395  MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
               Q L    I +E+ + +S +F   + +    N    ++       RG L+I+ L K +
Sbjct: 1357 RIVQELWAHDIISELAVDAS-SFEELVSHYKEDNHSWVVLVKADSNERG-LKIRSLVKKE 1414

Query: 455  ELSREIKNNESWREARVAQITIPISELVSTVK 486
            E      +  +W  A +         LV   K
Sbjct: 1415 EFDVRASDLVAWLRAEIRAQN-HREILVDHPK 1445


>gi|261380318|ref|ZP_05984891.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria
           subflava NJ9703]
 gi|284796835|gb|EFC52182.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria
           subflava NJ9703]
          Length = 385

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 71/411 (17%), Positives = 137/411 (33%), Gaps = 50/411 (12%)

Query: 7   LR-AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           ++  +LP   AD      R      + +  ++  +G++ ++ PL+EYS SL   + D   
Sbjct: 1   MKSWQLPEHVADVLPTNARQLESARERLLALFRVHGYELVQPPLMEYSHSLLTHI-DAGL 59

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             K +  +    G+ + +R D+T  +AR  A          R    G V      G    
Sbjct: 60  SLKTILVVDQLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGSVLHARPDGLLNM 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+ +Q   +  G     AD E+  +M  +++   +   +  + + +  +   +     L 
Sbjct: 120 REPLQAGAEMYGLEGIEADIELIDLMLKSMKIADM--GEVLLSLGHIGVFRALANAAHLD 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                         +  +     + V  L+ E + D               +  +     
Sbjct: 178 EQQSAT-------LLSLMQDKDAEAVSQLVKEWKLDGMWAKAFSL------LPRL----- 219

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + +    E +    A     + L  + +      + + ++ I  + +R   Y+TG 
Sbjct: 220 YGGREVLTLAREKLPELSAVSAALDALQAVCD-----AFPNQKVHIDLSELRVDNYHTGL 274

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           +Y A                 +V  GGRYDGL   F  +  PA GFS  +   I  L ++
Sbjct: 275 LYAAYGSNL----------HDAVARGGRYDGLGGYFG-RARPAAGFSFDLRSFIGRLPAI 323

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
              +             +  D   +   Q     LR  G    +  G   N
Sbjct: 324 GRES------------VVAVDVKDMPAAQEAVDALREQGQCVVIDYGIGYN 362


>gi|116618649|ref|YP_819020.1| ATP phosphoribosyltransferase regulatory subunit / ATP
           phosphoribosyltransferase catalytic subunit [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116097496|gb|ABJ62647.1| ATP phosphoribosyltransferase regulatory subunit / ATP
           phosphoribosyltransferase catalytic subunit [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 535

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 89/460 (19%), Positives = 162/460 (35%), Gaps = 71/460 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D   ++++ + +I   I  I  +  F PI TPL+E   +  K+       NK VF L
Sbjct: 9   GSRDEFGEKLQQKQKISQMITTILNDTDFTPINTPLIERESTFDKY------QNKNVFRL 62

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D  G+ + LR DLT P+AR+++ N        R Y IG VFR      G + Q  Q  +
Sbjct: 63  FDQVGENLVLRPDLTLPIARFLSANRQQNSMS-RLYYIGDVFRRTDSLSGDYNQETQAGI 121

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           + +G  +  A+ +    M    +  GI   D  + +++ + +D +LE + L  D +    
Sbjct: 122 ELIGDQSFEAEIQALDTMLKFAQEFGIV--DVQVVLSDARFIDVVLENLQLDQDLR---- 175

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
             + +AI++ +    + ++  + +       +   G  L              D E  M 
Sbjct: 176 QRMKQAIEQKNVSVFEELRATIPDFP-----EGLAGWPLA----------FGEDGETVMW 220

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +L E+               +         Y +  + +         YYTG +    +  
Sbjct: 221 QLQEIPAVNDIIND-----WLKLAEYTHKHYPAVAVTVDLAAASPQPYYTGTIIRGFVPS 275

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                         +  GGRYD L+  F+ +++PA G  + I  ++              
Sbjct: 276 LG----------RYLFSGGRYDRLLENFQNKSLPAVGMGLNIETILA--DWRRKPEEMKP 323

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF-------GNQL----- 421
           +   V++                      AGI   +    ++           +      
Sbjct: 324 QEPIVMVLGKGRVEKDARPLLK------AAGIDTSLLENPARKLIFDSTDGKYRFILVKP 377

Query: 422 ----KYADRRNCPLAIIQGTG---ERSRGMLQIKDLAKGK 454
               KY DR       I G+    E+ +    + +L  GK
Sbjct: 378 SDVVKYLDR-GIGDVGIVGSDTIAEQVQNHYDVLNLQTGK 416


>gi|318041464|ref|ZP_07973420.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           CB0101]
          Length = 392

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 61/403 (15%), Positives = 123/403 (30%), Gaps = 39/403 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +E+     + D +  +Y  +G+  +  PL+E  ++L          
Sbjct: 1   MALQPAAGARDLNPREVDGNRWLCDQLAEVYRRWGYAEVAPPLVERLETLEAGGG---IR 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +  L     + + LR ++TA +AR       +   P R +  G VFR+         
Sbjct: 58  DRELVRLA--SDEPLGLRPEMTASIARAACTRLASRPRPLRLWSSGAVFRSALSD-VGQP 114

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  +     V      A   +          +   R       +   +L G    +    
Sbjct: 115 RLEERLQSGVELLGADATQALVADAELLRLLLACLRQLQITADHQPTLLLGHHGILSALL 174

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D    ++ +  R            + L   E          +   L  +   ++     +
Sbjct: 175 DQVPAQQRLATR----QALINFDPLALADLELPGHQRQGLQQLLRLRGDTKAVLYQLEQL 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
               S+ E       ++A       + +  +                             
Sbjct: 231 LGPSSLLEQLAGTLNSVAAVAAGQGVRLQLDP-----------------------SFQPH 267

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           ++   G  +    Q PV    +  GGRYD LV+RF G         +G S  + A++ L 
Sbjct: 268 FDLYDGLVLKLVCQGPVAPVPLASGGRYDALVARFGGAAG-----GMGFSFDVEAIRELI 322

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
            +  +  E     +     +   L +     + L   G RAE+
Sbjct: 323 GTEASAPERPAATLVAYGTEGQ-LGEALDLLEALHRDGARAEL 364


>gi|144897887|emb|CAM74751.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 283

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 4/160 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M    K  A LP G  D    +      ++  +   +   G+D ++ PL+E+ D+L    
Sbjct: 1   MNDFAK-SALLPNGLRDILPLDAEYEADVVSRVTAHFAAQGYDRVKPPLIEFEDTLLDGA 59

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
                  K  F + D    + ++LR D+T  +AR        +  P R    G V R + 
Sbjct: 60  GAAMV--KQCFRVMDPVTQRMMALRADMTPQVARIARTRLAGMPRPLRLSYAGQVLRVKG 117

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                 RQF Q  ++ +G+    ADAE+ ++ A+ L A+G
Sbjct: 118 SQLRPERQFGQAGIELIGADCPEADAEVAILAAEALVALG 157


>gi|13435576|gb|AAH04665.1| Hars2 protein [Mus musculus]
          Length = 100

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 18/117 (15%)

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
               +       + L +       L  AGI+AEM   ++     QL Y ++ + PL +I 
Sbjct: 2   TETQVFVATPQKNFLQERLKIIAELWDAGIKAEMLYKNNPKLLTQLHYCEKADIPLMVII 61

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           G  ER+ G+++++ +A  +E+                  TI    LV+ ++K L E+
Sbjct: 62  GEQERNEGVIKLRSVASREEV------------------TINRESLVAEIQKRLSES 100


>gi|317969910|ref|ZP_07971300.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           CB0205]
          Length = 388

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 83/264 (31%), Gaps = 10/264 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +E+     + + +  +Y  +G+  +  P +E   +L          
Sbjct: 1   MALQPAAGTRDLNPREVDGNRWLSEQLGQVYRLWGYVEVSPPSVERLQTLEAGGR---IN 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ V  L       + LR ++TA +AR        +  P R +  G VFR+ +   G+ R
Sbjct: 58  DREVVRLA--SDDPLGLRPEMTASIARAACTRMAELPRPLRLWSCGTVFRSVQSDTGQQR 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              Q            + A+  ++         +     H  +        +   +    
Sbjct: 116 LEEQLQSGVELLGGHASVADAELLRLLLACIAKVGIGAEHRPMLLLGHHGVLSALLNQVP 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            ++ N     L + D L   GLQ     L   +  +     +      + +  + S L  
Sbjct: 176 PEQRNAARKALISFDPLALAGLQ-----LPSEQRQSLEQLMRLRGAPDQVLRQLESMLGP 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFN 270
             +         +  + A E    
Sbjct: 231 SSDLEHLSASLQLVASAATEAHVE 254


>gi|332866122|ref|ZP_08436837.1| anticodon binding domain protein [Acinetobacter baumannii 6013113]
 gi|332734763|gb|EGJ65857.1| anticodon binding domain protein [Acinetobacter baumannii 6013113]
          Length = 195

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 74/205 (36%), Gaps = 17/205 (8%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
               + + +  +G    +  I+  +VRGL+YY   V+E                 G+V  
Sbjct: 2   HFQQLQDYLTAAG---IKFVINQKLVRGLDYYNKTVFEWTTTA--------LGSQGTVCA 50

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           GGRYDGLV + KG+   +         +   L  LE                   +    
Sbjct: 51  GGRYDGLVGQLKGKADQSVPAVGFAMGMERLLLLLEQVEQAEIVRDCEAFLVA--EPAYQ 108

Query: 391 SKYQMYTQMLRT----AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           SK  +  + LR     A     +  GS  +  +Q+K AD+     AII G  E     L 
Sbjct: 109 SKALVLAEQLRDQLEAANSNIRIKTGSQGSMKSQMKKADQAGAVYAIILGEREWEAQQLA 168

Query: 447 IKDLAKGKELSREIKNNESWREARV 471
           +K+LA  ++    +     +   + 
Sbjct: 169 VKELATAEQSQVALAELVPFLIEKF 193


>gi|222629114|gb|EEE61246.1| hypothetical protein OsJ_15299 [Oryza sativa Japonica Group]
          Length = 1157

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 59/418 (14%), Positives = 130/418 (31%), Gaps = 23/418 (5%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
              + + I++  + +++ +          + S          +   K V  +    G+ + 
Sbjct: 725  SELLDSIIEVSKEVFKRHCAKR-----FQISPLHTLEGKFTENRGKTV-KILTQGGEMLE 778

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L Y+L  P    V  N                      G     +F+Q D D +G ++  
Sbjct: 779  LCYELRTPFVMSVVANQILSFK----RYEVSWVHRRAVGHSIPYRFLQGDFDIIGGASPI 834

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
             +AE+  +  D        +    I +N+ K+ + +    G+  + + N           
Sbjct: 835  PEAEIVKVTLDVGAHFYDPKA-IIIRLNHSKLAEAVCSWAGVPQERRQNVAEFFSS---- 889

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM---VSFLSIDLEKSMHELYELV 259
                     K       +   G   +   L+ E ++ +           ++ +  L   +
Sbjct: 890  -TLVQYWPNKADRKSQWSLIRGQLLQDLRLSEEVVEKLHKADQRFCGSADQVLARLRGTL 948

Query: 260  KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL--GFPVMN 317
                +  K  +E+    + +R        I I   +     YYT   ++  +  G P  +
Sbjct: 949  FYDKSACKALDEISAFLKCLRIWSI-EEHITIDVLMPPSECYYTDLFFQIYVKEGNPGSS 1007

Query: 318  EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
              +K +  G              +K +   A G SI + + +    S +     I+    
Sbjct: 1008 SHEKLLAIGGRYDWLIEQAWDRTYKSKPPGAVGVSIALEKFLPNSPSSDIGFPRIEPSIS 1067

Query: 378  VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
            VL+ +       L++       L  A I+A+       +   Q +YA   +    +  
Sbjct: 1068 VLVCSKGGGG-LLNERMELVAELWEANIKAQFVPQEDPSLQEQYEYASDHDIKCLVFI 1124


>gi|317403348|gb|EFV83861.1| ATP phosphoribosyltransferase regulatory subunit [Achromobacter
           xylosoxidans C54]
          Length = 385

 Score = 92.2 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/406 (17%), Positives = 136/406 (33%), Gaps = 56/406 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + ++Y  YGF+ +  PL+EY DSL      +       
Sbjct: 6   LPESLADVLPAEARRIEELRRELLDLYRTYGFELVAPPLVEYIDSLLSGTGSDLDLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + +R D+T  + R  A +        R    G V           R+ +
Sbjct: 64  CKLVDQLSGRTLGVRADMTPQVTRIDA-HLLNRAGVTRLCYCGNVLHARPADLLSSRELL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  ++ +T+   G++  +  + + +  +L  I+E         
Sbjct: 123 QIGAEIYGHAGFEADLEIVQLVLETVAIAGVR--NPRLVLCHPGVLRAIVES-------- 172

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF-TKGANLTSEQIDIMVSFLSID- 247
                      D         V  L+ E       +   + A + +E +  +     +  
Sbjct: 173 -----------DPAAAAVSPDVIRLMREKDVPGLTELAARTAGMRAETLKALQLLPKLYG 221

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + +      +          + L V+ +     G  +  + +    V G  Y++G  +
Sbjct: 222 GPEVLKRARHDLPLLPGVVAALDALQVLVD-----GMANVDVGVDLADVDGYGYHSGIKF 276

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                              ++  GGRYD +   F  +  PATGFS+ + +L   L   E 
Sbjct: 277 ALYAE----------GWRDALVRGGRYDDVSLAFG-RARPATGFSLDLRKLAAGLPPAER 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLG 412
           +       G                     + LR +G I  ++  G
Sbjct: 326 ARAVRAPWGQA------------PALTEAVRRLRRSGEIVVQVLPG 359


>gi|226313026|ref|YP_002772920.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782888|sp|C0ZF57|SYP_BREBN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226095974|dbj|BAH44416.1| prolyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 581

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 68/561 (12%), Positives = 139/561 (24%), Gaps = 97/561 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R  ++I   +R    N G   +  P ++ ++ L       D  
Sbjct: 31  MARQLASGIYTYLPLALRSLHKIQAIVREEMNNAGGQELLMPAMQPAE-LWHQTGRWDVY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV---------------FPCRT 108
              +  L+D   +  +L     ++   L R    ++  +                     
Sbjct: 90  GPELVRLRDRHDRPFALGPTHEEVITSLVRDEINSYKKLPINLYQIQTKFRDEVRPRFGL 149

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
            R       + +     +  +  +   +  +       + +         G         
Sbjct: 150 IRCREFIMKDAYSFDTSQDGLDRNFQAMYDAYTNIFTRVGLNFRAVEADAGAIGGKGTYE 209

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
                 +          GD   N     +              +  L            +
Sbjct: 210 FMALCDIGEDTIAYSEEGDFAANLEKAEVVYKPSAKPATEAPAREKLHTPGIKTIDQLVQ 269

Query: 229 GANLTSEQI---------DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
              + ++QI         D +V  L     +      + +             +V     
Sbjct: 270 ALQIEAKQIIKSLIYRVDDKLVMVLVRGDHEINEVKLKNLYDATIVGLASEADIVSVTGA 329

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
                    I      +    +    VY+ ++G    +     VV G      +Y  L +
Sbjct: 330 PAGFVGPVGIDPEKVDIIADNFVQD-VYDGVVGANETDYHLTHVVAGRDFTVSKYADLRN 388

Query: 340 RFKGQNVPAT-------------------------------------------GFSIGIS 356
             +G   P T                                            + IG+S
Sbjct: 389 ITEGDECPRTGGVIKFARGVEVGHVFKLGTKYSTAMGATYLDENGRSQPMIMGCYGIGVS 448

Query: 357 RLIVALKSLESSTN---NIKEMGPVLITTMDHD---SDSLSKYQMYTQMLRTAGIRAEMF 410
           R I A+    +  N       + P  +  +  +    +     +  T+ LR AGI     
Sbjct: 449 RTIAAVIEQNNDENGIIWPVSVAPFHVHVIPVNVKVEEQRQASEQITEALRKAGIEVLFD 508

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +  G + K AD    PL I         G ++++    G+                
Sbjct: 509 DRPERA-GVKFKDADLIGLPLRITVSDKAAQEGTVEVRIRKNGE---------------- 551

Query: 471 VAQITIPISELVSTVKKILQE 491
                + + +LV  VK IL  
Sbjct: 552 --THDVKLDQLVDEVKGILSR 570


>gi|255956073|ref|XP_002568789.1| Pc21g17940 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590500|emb|CAP96691.1| Pc21g17940 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1578

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 69/499 (13%), Positives = 139/499 (27%), Gaps = 73/499 (14%)

Query: 10   ELPRGFADC--------PTK--EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            + P+ F D              E+ ++  +   + +I+  +G        +E +  +   
Sbjct: 967  QSPKKFEDIAWDIDSHAVPAANELLVQGLVKKKLTSIFRRHG-------AVESTRQML-- 1017

Query: 60   LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYV--AENFDTIVFPCRTYRIGPVFRN 117
             P     N G   + D  G  + L YDLT P AR +   ++     F   T     V  +
Sbjct: 1018 FPRSQHYNNGAVRVLDASGNLLQLPYDLTLPNARAIPRQDHSLEKTFAFGTVYRDSVHGS 1077

Query: 118  EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
            E          I        +  E    ++   + +    +             R     
Sbjct: 1078 EPRTHREVDFDIVSHNTLDLALKEAEVIKVLDEIIEEFPPL-------------RSTPMC 1124

Query: 178  ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
             L    ++  D L   +   R          + +  L     T         A       
Sbjct: 1125 FL----VNHSDLLQLIMEFCRITSTQIPKAKEVLSKLNVGKYTMQKIRSELRAPAIGVAS 1180

Query: 238  DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN-------ELVVISELVRKSGYNSNRIK 290
              +      D   S+ E    ++  + G +           L V+   ++  G       
Sbjct: 1181 TSLDDLARFDFRDSLKETQRRLQNIMEGTEYAERIPPIFARLNVLMTYLQSFGVKRKIYI 1240

Query: 291  ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
               + V    Y    +++ I      +             GGRYD L+  F    +    
Sbjct: 1241 NPLSSVHDKFYRGSILFQCIFDSRRRD---------VFAAGGRYDQLIQEFSPNVLSNRP 1291

Query: 351  FSIGISRLI----------VALKSL------ESSTNNIKEMGPVLITTMDHDSD-SLSKY 393
             +  +   +            LK+       E++ +         +     D     +  
Sbjct: 1292 QAHAVGFNLGSDRLRSSMIDYLKAKAPSKDPETNADLYWATRRCDVLVASFDPTVLRTTG 1351

Query: 394  QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                + L +  I AE+ + +S +    L      N    +I     + RG  ++++L + 
Sbjct: 1352 VKLIEELWSNNISAELAVDAS-SLEELLAKYKDSNHRCIVIAKQDSKERG-FKVRNLMRK 1409

Query: 454  KELSREIKNNESWREARVA 472
            +E          W  + V 
Sbjct: 1410 EEFDIRTAELVMWLRSEVQ 1428


>gi|326795791|ref|YP_004313611.1| ATP phosphoribosyltransferase regulatory subunit [Marinomonas
           mediterranea MMB-1]
 gi|326546555|gb|ADZ91775.1| ATP phosphoribosyltransferase regulatory subunit [Marinomonas
           mediterranea MMB-1]
          Length = 392

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 141/400 (35%), Gaps = 38/400 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +   ++      +  S+ N++E++G+  +  PL+EY DSL      +       
Sbjct: 9   LPDGVDEALPEKAAQIEHLRRSLLNLHESWGYKLVIPPLIEYLDSLLTGAGSDLEI--ET 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D T+ +AR  A +        R    G V R    G    R  I
Sbjct: 67  FKVIDQLSGRLMGIRADFTSQVARIDA-HCLKEEDIQRLSYSGSVLRTVPAGLDGTRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     +D E+  +M +TL   G+      + I +  I+ G++E  GL   D+
Sbjct: 126 QLGAELYGHGGLESDLEILSLMLETLRVAGL--EKLVLDIGHVDIVRGVIEAAGLSEADQ 183

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           +                    +  L           F    N T      + +   +   
Sbjct: 184 V-------------------KLSELYKAKDLPELEVFVAQLNATDRVKSWLTALPRLCGG 224

Query: 250 -KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +   ++ G         +++     V KS +    +    + +    Y+TG V+ 
Sbjct: 225 VEVLAKASSVLDGVSKSVSDAIDMLNRVVEVVKSRFPQIGLHFDLSDLVSYSYHTGLVFA 284

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A           +P    ++  GGRY+ +   F  ++ PATGFS  +  L+   +     
Sbjct: 285 AY----------QPGHGNAIARGGRYNNIGEVFG-RSRPATGFSTDLKTLVSLSQPNVEQ 333

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
              +           D  +    +     + L    +R E
Sbjct: 334 KLRVLSPVVSSAKLWDKLNKLRQEGYQVVEQL-DDDVRVE 372


>gi|109892443|sp|Q4FTX3|HISZ_PSYA2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
          Length = 387

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 62/401 (15%), Positives = 134/401 (33%), Gaps = 44/401 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++   +  +   +      +G+  +  P++E+++SL     ++    +  
Sbjct: 2   LPDGVADVLFEDAHKQEVLRHQLTQQLITHGYQLVSPPMIEFTESLLSGASED--LKRQT 59

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  + R  A +        R    G V      G    R  +
Sbjct: 60  FKIIDQLTGRLMGIRADITPQILRIDAHHGGD--GIARYCYAGDVIHTLPSGLFGSRTPL 117

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD E+  ++   + ++     D    ++       I +++       
Sbjct: 118 QLGAEIFGCESIAADIELIDVLFSMINSL-----DMSAVLHVDLGHVTIFKRLAELAALS 172

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
            ++   +++     +   L+ V  +L         DF   A    +  +++         
Sbjct: 173 ASDTEQLMQLYANKNLPELKQVCQVL-----PMGSDFYTLARFGHDIANLLGRL------ 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                  E  +         +EL  +   ++     +  I ++   + G  Y+TG V+  
Sbjct: 222 ------SENAQQDTKIVTAIDELQRLKAHLQVQWQCAVSIDVT--ELSGYHYHTGIVFNG 273

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS-RLIVALKSLESS 368
            +                +  GGR+DG+ S     N P       +    ++A   L++ 
Sbjct: 274 YINSETQ----------PLVRGGRFDGMKSNQLATNQPRQATGFSMDVSRLLAHTQLDAP 323

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
              + +         + DS            LR  G R  M
Sbjct: 324 FIVLIDYDAFN----NLDSAQRQLLLQQVASLRQQGYRVTM 360


>gi|71065242|ref|YP_263969.1| ATP phosphoribosyltransferase regulatory subunit [Psychrobacter
           arcticus 273-4]
 gi|71038227|gb|AAZ18535.1| possible ATP phosphoribosyltransferase regulatory subunit
           [Psychrobacter arcticus 273-4]
          Length = 434

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 62/401 (15%), Positives = 134/401 (33%), Gaps = 44/401 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++   +  +   +      +G+  +  P++E+++SL     ++    +  
Sbjct: 49  LPDGVADVLFEDAHKQEVLRHQLTQQLITHGYQLVSPPMIEFTESLLSGASED--LKRQT 106

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  + R  A +        R    G V      G    R  +
Sbjct: 107 FKIIDQLTGRLMGIRADITPQILRIDAHHGGD--GIARYCYAGDVIHTLPSGLFGSRTPL 164

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD E+  ++   + ++     D    ++       I +++       
Sbjct: 165 QLGAEIFGCESIAADIELIDVLFSMINSL-----DMSAVLHVDLGHVTIFKRLAELAALS 219

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
            ++   +++     +   L+ V  +L         DF   A    +  +++         
Sbjct: 220 ASDTEQLMQLYANKNLPELKQVCQVL-----PMGSDFYTLARFGHDIANLLGRL------ 268

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                  E  +         +EL  +   ++     +  I ++   + G  Y+TG V+  
Sbjct: 269 ------SENAQQDTKIVTAIDELQRLKAHLQVQWQCAVSIDVT--ELSGYHYHTGIVFNG 320

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS-RLIVALKSLESS 368
            +                +  GGR+DG+ S     N P       +    ++A   L++ 
Sbjct: 321 YINSETQ----------PLVRGGRFDGMKSNQLATNQPRQATGFSMDVSRLLAHTQLDAP 370

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
              + +         + DS            LR  G R  M
Sbjct: 371 FIVLIDYDAFN----NLDSAQRQLLLQQVASLRQQGYRVTM 407


>gi|255025910|ref|ZP_05297896.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL J2-003]
          Length = 182

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 6/159 (3%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E +   +I   + + +E  GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREAQAAYKIEQQVNHYFEKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+     +    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVMLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
            +  Q  ++ +G  +  A+ E  ++    L A+ I    
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILIGIGVLNALEIPNFQ 154


>gi|330978946|gb|EGH78005.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 199

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 6/189 (3%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLR 198
                 + R
Sbjct: 184 QQLFDALQR 192


>gi|257482406|ref|ZP_05636447.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 192

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 6/189 (3%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LNERLIVLR 198
                 + R
Sbjct: 184 QQLFDALQR 192


>gi|50084443|ref|YP_045953.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter sp.
           ADP1]
 gi|81827491|sp|Q6FCS8|HISZ_ACIAD RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|49530419|emb|CAG68131.1| ATP phosphoribosyltransferase [Acinetobacter sp. ADP1]
          Length = 388

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 76/405 (18%), Positives = 141/405 (34%), Gaps = 50/405 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++   +     +   + G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVVETLRRQALDFLASRGYQLVYTPFIEYIESLSLLSESNHDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +  +I    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGVRADMTPQVARIDA-HVRSIEGVARYCYAGTVLHTKPQNFNSSRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   ++         H+ + +  +   ++++ GL    +
Sbjct: 128 QLGAELYGHQSLEADIEMVDVMLGLIQQAHNLEG-LHLDLGHVGLFRSLVKRAGLSKQVE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D  D +  + +  L    +T   G         +  ++ +   LS D  
Sbjct: 187 ----------QDLSDLYQRKALPELEEVTKTLAFGSDFYALGRYASDLNALEQHLSQD-- 234

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                    V    + +   ++L      + ++ + + RI I    +R   Y+TG +Y  
Sbjct: 235 ---------VLNDASFKTSLDDLKTTLSQI-QTRWPNLRIGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  +  PATGFS            L +  
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSC----------DLYALC 323

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               +    ++     D   L       Q  R  G+R    LG+ 
Sbjct: 324 VGQFKEIETIVAPAGQDQQLLGA---IAQA-RQNGLRVIQLLGND 364


>gi|116494921|ref|YP_806655.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus casei ATCC 334]
 gi|122263661|sp|Q039A9|HISZ_LACC3 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|116105071|gb|ABJ70213.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           casei ATCC 334]
          Length = 382

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 72/352 (20%), Positives = 123/352 (34%), Gaps = 38/352 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D        +  ++ +I   +   GF+ ++TPLLEY D         ++P    
Sbjct: 6   LPIGTRDEFGPRAIRKENLIQTISQQFIQAGFERVKTPLLEYRDVFKPLAVSGEQP---- 61

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + + DD G+ + +R DLT PLAR ++    +IV P + + +G +FR +K   G + Q  Q
Sbjct: 62  YQMLDDAGESVVMRPDLTLPLARLLST--TSIVPPVQWWYVGDIFRVKKSLSGTYNQITQ 119

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G  +  A+             +G+                     + L     +
Sbjct: 120 AGIELIGYRSLKAEWACLSEAGKICRTLGLTHLT-----------------LELSDAQFV 162

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            + L  L+  D                   D              Q      +L  D E 
Sbjct: 163 PQILRTLQLNDAAADAFQTAFFAKELSTYQDLIAPLATNPLYPFLQQ---WPWLFGDSET 219

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              EL  L+            L      ++   +   R+ I  T      YYTG  + A 
Sbjct: 220 IFAELKRLLPSN-VITDRLAPLQQTVAFLKGQ-FPELRVTIDLTSRPPQSYYTGIFFHAY 277

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +                +  GGRYD L++ F+ + +PA G +  I  +   L
Sbjct: 278 V----------DGGHQYLFSGGRYDKLLASFQQELLPAVGLAFDIDAVTDQL 319


>gi|225376539|ref|ZP_03753760.1| hypothetical protein ROSEINA2194_02181 [Roseburia inulinivorans DSM
           16841]
 gi|225211638|gb|EEG93992.1| hypothetical protein ROSEINA2194_02181 [Roseburia inulinivorans DSM
           16841]
          Length = 352

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 156/346 (45%), Gaps = 36/346 (10%)

Query: 80  WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
              +RYDLT PL RY + N + +  P +  ++G V+R ++   GR+RQF+QCD+D +G  
Sbjct: 20  DFGMRYDLTVPLVRYYSNNANDLPSPFKALQMGNVWRADRPQRGRYRQFMQCDIDIIGEP 79

Query: 140 AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
           +  A+ E+ +    T+  +G K  ++ I IN R+IL  +    G   +D       V   
Sbjct: 80  SNLAEIELILATTTTIGKLGFK--NFEIRINERRILKAMAAYSGFAEED----YDTVFII 133

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS-----IDLEKSMHE 254
           +DK+DK GL GV   L +                 E ID  +          +    +  
Sbjct: 134 LDKMDKIGLDGVAEELAKE------------GYAKESIDKYLGLFKGVEEAGNGIDGICY 181

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           + + ++G +  E     L+ I   V  +     ++    T+VRG+ YYTG ++E      
Sbjct: 182 IAKTLEGFLE-EDVEKNLLEIINSVNAAKQADFKLVFDPTLVRGMSYYTGTIFEI----- 235

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
                  P +  + GGGGRYD +V +F GQ+VPA GFSIG  R+++ L      T  ++ 
Sbjct: 236 -----AMPELGAACGGGGRYDKMVGKFTGQDVPACGFSIGFERIVLLLMESG-FTVPMQR 289

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGSSKNFGN 419
                +    + +D L       Q  R AG +  +  +  +K F  
Sbjct: 290 PKVAYLIEKGYPADKLVDVIAKAQEERQAGKQVLVVRMNKNKKFQK 335


>gi|170748459|ref|YP_001754719.1| prolyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|226701311|sp|B1LUL8|SYP_METRJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170654981|gb|ACB24036.1| prolyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 441

 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/454 (13%), Positives = 126/454 (27%), Gaps = 61/454 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  R+   IR   +  G   I  P ++ ++ L +     D   K +  L
Sbjct: 38  GIYAWLPLGLRVLERVCAVIRREQDRSGAVEILMPTVQSAE-LWRESGRYDAYGKEMLRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D   + +       ++   + R    ++  +      Y+I   FR+E        +  +
Sbjct: 97  KDRHDREMLYGPTAEEMVTEIFRASVRSYKDLPK--NLYQISWKFRDEVRPRFGTMRSRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                           M    +   +  G +     + +   +   G+  K      D  
Sbjct: 155 FL--------------MKDAYSFDFDQAGARHAYNRMFVAYLRTFAGLGLKAIPMRADTG 200

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                +      L K G   V              F   A L  +     V F   D   
Sbjct: 201 PIGGDLSHEFIILAKTGESEV--------------FCDKAYLGFDIPPATVDF---DDVA 243

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           ++  + +      A  +  +E    +E+             S    RG+E      +   
Sbjct: 244 ALQGIVDAWTSHYAATEEMHEPAAFAEVPED----------SRMAARGIEVGHIFYFGTK 293

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              P+  +   P            DG+       +       +  + +  +         
Sbjct: 294 YSEPMGAKVAGP------------DGIERPVHMGSYGIGPSRLVAAIIEASHDEAGIIWP 341

Query: 371 NIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +      V +  +     +           L  AG+   ++    +  G +   AD    
Sbjct: 342 DAVAPFDVALINLKVGDSATEAACAQIQSDLEAAGLSV-LYDDRDERPGAKFATADLIGL 400

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           P  +I G    + G +++K  A G+  S    + 
Sbjct: 401 PWQVIVGPKGLAEGKVELKRRAGGERESLATVDL 434


>gi|103486108|ref|YP_615669.1| tRNA synthetase, class II (G, H, P and S) [Sphingopyxis alaskensis
           RB2256]
 gi|98976185|gb|ABF52336.1| tRNA synthetase, class II (G, H, P and S) [Sphingopyxis alaskensis
           RB2256]
          Length = 370

 Score = 91.8 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 7/179 (3%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L   LP G  D   ++    +R+  ++ +    +G+  +  PL E+ ++LG   
Sbjct: 1   MTKAPAL---LPEGLRDRLPRQAEAASRVTRALVDAMRAHGYGRVSPPLAEFRETLGS-- 55

Query: 61  PDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            D+DR  + +    D    + ++LR D+T  + R           P R    G V +   
Sbjct: 56  -DDDRSGRDLLRFTDPVSQRTLALRPDITRQVGRIATSLLAASPRPLRLCYAGQVVKLRA 114

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
                 R+ +Q   + +GS +  A  E+  +  D LEA GI        + +   L   
Sbjct: 115 SQLRPAREMLQVGAELIGSDSVAAAREIVTVAIDALEAAGIGPVTIDFTLPDVVDLLAF 173


>gi|115459156|ref|NP_001053178.1| Os04g0492600 [Oryza sativa Japonica Group]
 gi|113564749|dbj|BAF15092.1| Os04g0492600 [Oryza sativa Japonica Group]
          Length = 431

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 58/404 (14%), Positives = 128/404 (31%), Gaps = 18/404 (4%)

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
            +    G+ + L Y+L  P    V  N                      G     +F+Q 
Sbjct: 27  KILTQGGEMLELCYELRTPFVMSVVANQILSFK----RYEVSWVHRRAVGHSIPYRFLQG 82

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
           D D +G ++   +AE+  +  D        +    I +N+ K+ + +    G+  + + N
Sbjct: 83  DFDIIGGASPIPEAEIVKVTLDVGAHFYDPKA-IIIRLNHSKLAEAVCSWAGVPQERRQN 141

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM---VSFLSIDL 248
                               K       +   G   +   L+ E ++ +           
Sbjct: 142 VAEFFSS-----TLVQYWPNKADRKSQWSLIRGQLLQDLRLSEEVVEKLHKADQRFCGSA 196

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++ +  L   +    +  K  +E+    + +R        I I   +     YYT   ++
Sbjct: 197 DQVLARLRGTLFYDKSACKALDEISAFLKCLRIWSI-EEHITIDVLMPPSECYYTDLFFQ 255

Query: 309 AIL--GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
             +  G P  +  +K +  G              +K +   A G SI + + +    S +
Sbjct: 256 IYVKEGNPGSSSHEKLLAIGGRYDWLIEQAWDRTYKSKPPGAVGVSIALEKFLPNSPSSD 315

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I+    VL+ +       L++       L  A I+A+       +   Q +YA  
Sbjct: 316 IGFPRIEPSISVLVCSKGGGG-LLNERMELVAELWEANIKAQFVPQEDPSLQEQYEYASD 374

Query: 427 RNCPLAIIQGTGERSR-GMLQIKDLAKGKELSREIKNNESWREA 469
            +    +       S+  +++++ L   +E   + +    +   
Sbjct: 375 HDIKCLVFITEAGVSQTELVKVRHLDAKREKEVKREELVKFLSD 418


>gi|326564009|gb|EGE14254.1| ATP phosphoribosyltransferase regulatory subunit [Moraxella
           catarrhalis 103P14B1]
 gi|326577077|gb|EGE26971.1| ATP phosphoribosyltransferase regulatory subunit [Moraxella
           catarrhalis O35E]
          Length = 430

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 70/356 (19%), Positives = 140/356 (39%), Gaps = 26/356 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    + + +  + D++  +   +G+  +  PL+EY++SL     ++    +  
Sbjct: 26  LPDGVADVLFTDAQKQESLRDALLFVLTAHGYRLVSPPLIEYTESLLNNADED--LKRQT 83

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D  +G+ + LR D+T  + R  ++    I    R   +G V +    G    R  +
Sbjct: 84  FKFIDQLNGRLMGLRADITPQILRIDSKYGQGIS---RYCYVGQVVKTLPTGLFGLRTPL 140

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     A+ E+  ++    + +G+ R   H+ I +  I D + +  G+   D 
Sbjct: 141 QLGAEIFGIDDIRAELELIDLLVALADEIGLGRQMLHVDIGHVAIFDRLCQLHGVSNKDA 200

Query: 190 LNER-LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                +   +A+ +L K+    +   L                L+S++     + L+   
Sbjct: 201 DELIGIYHKKAMPELAKWCQN-MGNSLNSPSDATDFLVLAKHTLSSDRTPNAEALLNKLS 259

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +K+  +            +  NEL  ++  +R  G +   + I  T + G  Y+TG V+ 
Sbjct: 260 DKARQDNQ--------IIQAANELATLAAHIRAVGMS---VSIDVTELSGYHYHTGVVFN 308

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
           A LG      +       ++  GGR+DG+ +    +        I      V L+ 
Sbjct: 309 AYLGNRTTQTQ-------ALVRGGRFDGISTHSVARGATGFSMDINRLLEFVELEE 357


>gi|227824508|ref|ZP_03989340.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226905007|gb|EEH90925.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 571

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 62/515 (12%), Positives = 135/515 (26%), Gaps = 77/515 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +   +I   IR   +      I  P+++ S+   K     D     +F +
Sbjct: 38  GLYTYLPLAWKSIKKIERIIREEMDAIDSQEIMMPIVQPSEI-WKESGRWDVYGAEMFRV 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRFR 126
           +D  G+   L     ++   L +    ++  +          +R     R        F 
Sbjct: 97  RDRHGREFCLGPTHEEMITTLVKNELHSYRQLPTSLYQIQSKFRDEKRPRFGLMRSREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI----------------- 169
                  D   +  + +  +M    A   +  G+                          
Sbjct: 157 MKDAYTFDADEAGLDESYQKMYDAYARIFDRCGLNYRPVEADPGAIGGNGSHEFMGIAAS 216

Query: 170 ----NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
                           +     + L  +    R +  +   G   ++ +           
Sbjct: 217 GEAGIVYCDTCDYAADVEKAECEALPSQEEAPRELHTIGTPGCNTIEAVCEYLHAPIEKS 276

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN--------------- 270
               A LTS++  +++ F+  D E +  ++   V                          
Sbjct: 277 VKAVA-LTSDKGGLILCFVRGDHEVNEIKVTNAVGANEVMMASDEQIRAAGTVPGFMGPI 335

Query: 271 --ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
             +L   + L+  +  N + +   +  V           + +    +             
Sbjct: 336 GLDLNKCTILIDATVMNMHNVCCGANEVDTHYVDAEPCRDFVYTKVLDIRTAHEGDQCPH 395

Query: 329 GGGG-----------------RYDGLVSRFK------GQNVPATGFSIGISRLIVALKSL 365
             G                  +Y   +           +      + IG+ R + A+   
Sbjct: 396 CKGHLKEARGIEVGQVFKLYTKYSEALHATFLDPEGKEKPFYMGSYGIGVGRTLAAVIEQ 455

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                      NI     +++     D +S +K     Q L   GI A +     +  G 
Sbjct: 456 YHDANGAIMPKNIAPYEVIVLPVNVKDEESFAKAGEIYQALNAQGIDAILDDRDERA-GV 514

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           + K AD    P+ ++ G     RG +++K    G+
Sbjct: 515 KFKDADLIGYPVRVVVGPKTLQRGAMEVKVRYTGE 549


>gi|76156180|gb|AAX27409.2| SJCHGC04782 protein [Schistosoma japonicum]
          Length = 179

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 23/171 (13%)

Query: 324 VFGSVGGGGRYDGL--VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK---EMGPV 378
           V GSV GGGRYDGL  +    G  VP  GFS G+ RL+   ++L +S++  K        
Sbjct: 21  VVGSVAGGGRYDGLVGMFDSSGTRVPCVGFSFGVERLLAIKEALATSSDKSKCIVRSTET 80

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +         + +     Q+L  A I+A M   +     +QL+Y +    PLA++ G  
Sbjct: 81  EVMVAGAHKGLIMQRLQCCQLLWDAKIKATMSHKNHPRLLDQLQYCESTGIPLAVVLGES 140

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
           E +R  ++++D+   +E                    +  ++LV+ +K++L
Sbjct: 141 ELARNTVKLRDIQSREE------------------YEVVYTDLVNKIKELL 173


>gi|258541414|ref|YP_003186847.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632492|dbj|BAH98467.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635549|dbj|BAI01518.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638604|dbj|BAI04566.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641658|dbj|BAI07613.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644713|dbj|BAI10661.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256647768|dbj|BAI13709.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256650821|dbj|BAI16755.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256653812|dbj|BAI19739.1| histidyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 394

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 7/197 (3%)

Query: 1   MGKKTKLRAEL-PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M +       L P GF D  T + R     + ++ +++ ++G+D +  PL+E+ D+    
Sbjct: 13  MTEDPPFSPALLPAGFVDFLTPDARTEAEGVATLMDVFASHGYDRVRPPLIEFEDTYLAG 72

Query: 60  LPDEDRPNKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG-PVFRN 117
                   +  F + D D  + + LR D+T  +AR  A    +   P R    G  V  +
Sbjct: 73  A--GAALAEQSFRVMDPDTRRMMVLRPDITPQVARMAATRVASTPRPLRVSYAGVCVVVS 130

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
                   RQ +Q  ++ +G  +  ADAE+  + A+ LE +G+K  D    +     +  
Sbjct: 131 PVAAEESSRQIMQTGIELIGPDSPEADAEVMSVGAEALERLGVK--DVSFDLTMPPFIPA 188

Query: 178 ILEKIGLHGDDKLNERL 194
           +LE+  +    +     
Sbjct: 189 LLEESKVPEAQRAALMR 205


>gi|254991738|ref|ZP_05273928.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL J2-064]
          Length = 184

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 6/159 (3%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E +   +I   + + +E  GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREAQAAYKIEQQVNHYFEKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++   D+ G+   LR D+T P+ R V+     +    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVMLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
            +  Q  ++ +G  +  A+ E  +     L A+ I    
Sbjct: 116 NEQTQAGIEIIGYPSIKAEIECILSGIGVLNALEIPNFQ 154


>gi|326560404|gb|EGE10786.1| ATP phosphoribosyltransferase regulatory subunit [Moraxella
           catarrhalis 7169]
          Length = 430

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 70/356 (19%), Positives = 139/356 (39%), Gaps = 26/356 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    + + +  + D++  +   +G+  +  PL+EY++SL     ++    +  
Sbjct: 26  LPDGVADVLFTDAQKQESLRDALLFVLTAHGYRLVSPPLIEYTESLLNNADED--LKRQT 83

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D  +G+ + LR D+T  + R  ++    I    R   +G V +    G    R  +
Sbjct: 84  FKFIDQLNGRLMGLRADITPQILRIDSKYGQGIS---RYCYVGQVVKTLPTGLFGLRTPL 140

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     A+ E+  ++    + VG+ R   H+ I +  I D + +  G+   D 
Sbjct: 141 QLGAEIFGIDDICAELELIDLLVALADEVGLDRQMLHVDIGHVAIFDRLCQLHGVSNKDA 200

Query: 190 LNER-LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                +   +A+ +L K+    +   L                L+S++     + LS   
Sbjct: 201 DELIGIYHKKAMPELTKWCQN-MGNSLNSPSDATDFLVLAKHTLSSDRTPNAEALLSKLS 259

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +K+  +            +  NEL  ++  +R  G +   + I  T + G  Y+TG V+ 
Sbjct: 260 DKARQDNQ--------IIQAANELATLAAHIRAVGMS---VSIDVTELSGYHYHTGVVFN 308

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             LG      +       ++  GGR++G+ +    +        I      V L+ 
Sbjct: 309 VYLGNRTTQTQ-------ALVRGGRFNGISTHSVARGATGFSMDINRLLEFVELEE 357


>gi|291286279|ref|YP_003503095.1| prolyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290883439|gb|ADD67139.1| prolyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 570

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/535 (11%), Positives = 140/535 (26%), Gaps = 80/535 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++ ++  G        + +  ++ D +R          +  P ++ ++ L +  
Sbjct: 26  MARAGMIK-KVASGIYSYLPLGLVVIKKVEDIVRKCMNEADAVELMMPSVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D   K +  ++D   +         ++T  + R    ++  +      Y+I   FR+
Sbjct: 84  GRWDFYGKELLRIKDRHNREFCYGPTHEEVTTDIIRSYINSYKALP--VNLYQIQTKFRD 141

Query: 118 EKHGPGRFRQ---FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           E        +   FI  D  +       A+     M         +    Y +   +   
Sbjct: 142 EVRPRFGLMRGREFIMKDAYSFDMDDAGANISYQKMYDAYRRIFEMCGLRYKVVDADSGA 201

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           + G      +       + +I   + D         V+        D             
Sbjct: 202 IGGSFSHEFMVLASTGEDFVISCNSCDYSANVEKATVRKSTEPFSGDMKAAEDINTPNAK 261

Query: 235 EQIDIMVSFLSIDLEKSM------------------HELYELVKGTIAGEKGFNELVVIS 276
              D + +FL+I   + +                       L K          E     
Sbjct: 262 TVAD-VAAFLNIKESEVIKTMVLNVDDKIIAVCIRGDHELNLAKVKNFFNASVAEFATPV 320

Query: 277 EL-------------------------VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           E+                         V   G               + +     +E++ 
Sbjct: 321 EIYDNTGGPLGYSGPVGLKIPVYGDYAVEAMGNYCVGANEKEMHKINVNHGRDFNFESVD 380

Query: 312 GFPVMNEKQKPVVFGSVGG-------------GGRYDGLVSRFK------GQNVPATGFS 352
            F            G                 G +Y   ++          +      + 
Sbjct: 381 DFRNAEAGDVCCECGGTYEITKGIEVGHIFKLGTKYSSSMNAMYLDKDGKRKPFVMGCYG 440

Query: 353 IGISRLIVALKSLE---SSTNNIKEMGPVLITTMD---HDSDSLSKYQMYTQMLRTAGIR 406
           IGI+R++ A                + P  I  +     D +     +   + L   G+ 
Sbjct: 441 IGITRVVAAAIEQNHDEKGIVWPVNLAPFKICVLPLAMKDQEVSETAENIYKDLINKGVE 500

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +     +  G +   A+    PL ++ G    ++G +++   A G+    +++
Sbjct: 501 VLLDDRDER-PGVKFNDAELIGIPLRVVIGKKTLAQGKIEVTVRASGESYEVDVE 554


>gi|289668879|ref|ZP_06489954.1| histidyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 122

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 21/132 (15%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++         +     ++  M  D   L       + LR  GI  E+ +   K  G Q 
Sbjct: 1   MREAGLIQGIAESSVQAMVALM--DETRLDDALDIARRLRIGGINTEVQM-EPKKVGKQF 57

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           +YA R      ++ G  E +RG++ +KDL                   R  Q  +   EL
Sbjct: 58  QYAARAGIRFVVLAGDDELARGVVAVKDLV------------------REQQFDVARDEL 99

Query: 482 VSTVKKILQENK 493
            ST++  L++ K
Sbjct: 100 ASTLQVELEQAK 111


>gi|330939874|gb|EGH43102.1| ATP phosphoribosyltransferase regulatory subunit [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 185

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 74/182 (40%), Gaps = 6/182 (3%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E          + ++++++G++ + TP +EY +SL      +       
Sbjct: 9   LPDGIEEVLPPEAARIEVARRQVLDLFQSWGYEFVVTPHIEYLESLLTGAGSDLDLR--T 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ +  R D+T  +AR  A +      P R    G V   +       R  I
Sbjct: 67  FKVIDPQSGRQMGFRADITPQVARIDA-HTLKREGPSRLCYAGSVLHAQPRALSSSRSPI 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G ++ ++D E+  +M   L+       D H+ + +  I  G+    GL G+ +
Sbjct: 126 QLGAELYGDASPSSDVEVISLMLAMLQL--ADVPDVHMDLGHVGIYRGLARAAGLSGEVE 183

Query: 190 LN 191
             
Sbjct: 184 QQ 185


>gi|296113026|ref|YP_003626964.1| ATP phosphoribosyltransferase regulatory subunit [Moraxella
           catarrhalis RH4]
 gi|295920719|gb|ADG61070.1| ATP phosphoribosyltransferase regulatory subunit [Moraxella
           catarrhalis RH4]
          Length = 416

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 71/356 (19%), Positives = 140/356 (39%), Gaps = 26/356 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    + + +  + D++  +   +G+  +  PL+EY++SL     ++    +  
Sbjct: 12  LPDGVADVLFTDAQKQESLRDALLFVLTAHGYRLVSPPLIEYTESLLNNADED--LKRQT 69

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D  +G+ + LR D+T  + R  ++    I    R   +G V +    G    R  +
Sbjct: 70  FKFIDQLNGRLMGLRADITPQILRIDSKYGQGIS---RYCYVGQVVKTLPTGLFGLRTPL 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     A+ E+  ++    + VG+ R   H+ I +  I D + +  G+   D 
Sbjct: 127 QLGAEIFGIDDICAELELIDLLVALADEVGLDRQMLHVDIGHVAIFDRLCQLHGVSNKDA 186

Query: 190 LNER-LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                +   +A+ +L K+    +   L                L+S++     + LS   
Sbjct: 187 DELIGIYHKKAMPELTKWCQN-MGNSLNSPSDATDFLVLAKHTLSSDRTPNAEALLSKLS 245

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +K+  +            +  NEL  ++  +R  G +   + I  T + G  Y+TG V+ 
Sbjct: 246 DKARQDNQ--------IIQAANELATLAVHIRAVGMS---VSIDVTELSGYHYHTGVVFN 294

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             LG      +       ++  GGR+DG+ ++   +        I      V L+ 
Sbjct: 295 VYLGNRTTQTQ-------ALVRGGRFDGISTQSVARGATGFSMDINRLLEFVELEE 343


>gi|227535080|ref|ZP_03965129.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|227187295|gb|EEI67362.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
          Length = 382

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 69/352 (19%), Positives = 128/352 (36%), Gaps = 38/352 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D        +  ++ +I   +   GF+ ++TPLLEY D         ++P    
Sbjct: 6   LPIGTRDEFGPRAIRKENLIQTISQQFIQAGFERVKTPLLEYRDVFKPLAVSGEQP---- 61

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + + DD G+ + +R DLT PLAR ++    +IV P + + +G +FR +K   G + Q  Q
Sbjct: 62  YQMLDDAGESVVMRPDLTLPLARLLST--TSIVPPVQWWYVGDIFRVKKSLSGTYNQITQ 119

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G  +  A+             +G+      + +++ + +  IL  + L+     
Sbjct: 120 AGIELIGYRSLKAEWACLSEAGKICRTLGLT--HLTLELSDAQFVPQILRTLQLNDAAAD 177

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
             +           +  +  +                               +L  D E 
Sbjct: 178 AFQTAFFAKELSTYQNLIAPLATNPLYPFLQQW------------------PWLFGDSET 219

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              EL  L+            L      ++   +   R+ I  T      YYTG  + A 
Sbjct: 220 IFAELKRLLPSN-VITDRLAPLQQTVAFLKDQ-FPELRVTIDLTSRPPQSYYTGIFFHAY 277

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +                +  GGRYD L++ F+ + +PA G +  I  +   L
Sbjct: 278 V----------DGGHQYLFSGGRYDKLLASFQQELLPAVGLAFDIDAVTDQL 319


>gi|191638430|ref|YP_001987596.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           casei BL23]
 gi|229464985|sp|B3WED7|HISZ_LACCB RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|190712732|emb|CAQ66738.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           casei BL23]
 gi|327382462|gb|AEA53938.1| Histidyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385660|gb|AEA57134.1| Histidyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 382

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 69/352 (19%), Positives = 128/352 (36%), Gaps = 38/352 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D        +  ++ +I   +   GF+ ++TPLLEY D         ++P    
Sbjct: 6   LPIGTRDEFGPRAIRKENLIQTISQQFIQAGFERVKTPLLEYRDVFKPLAVSGEQP---- 61

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + + DD G+ + +R DLT PLAR ++    +IV P + + +G +FR +K   G + Q  Q
Sbjct: 62  YQMLDDAGESVVMRPDLTLPLARLLST--TSIVPPVQWWYVGDIFRVKKSLSGTYNQITQ 119

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G  +  A+             +G+      + +++ + +  IL  + L+     
Sbjct: 120 AGIELIGYRSLKAEWACLSEAGKICRTLGLT--HLTLELSDAQFVPQILRTLQLNDAAAD 177

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
             +           +  +  +                               +L  D E 
Sbjct: 178 AFQTAFFAKELSTYQNLIAPLATNPLYPFLQQW------------------PWLFGDSET 219

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              EL  L+            L      ++   +   R+ I  T      YYTG  + A 
Sbjct: 220 IFAELKRLLPSN-VITDRLAPLQQTVAFLKDQ-FPELRVTIDLTSRPPQSYYTGIFFHAY 277

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +                +  GGRYD L++ F+ + +PA G +  I  +   L
Sbjct: 278 V----------DGGHQYLFSGGRYDKLLASFQQELLPAVGLAFDIDAVTDQL 319


>gi|296809139|ref|XP_002844908.1| serine/threonine-protein kinase GCN2 [Arthroderma otae CBS 113480]
 gi|238844391|gb|EEQ34053.1| serine/threonine-protein kinase GCN2 [Arthroderma otae CBS 113480]
          Length = 1591

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 72/473 (15%), Positives = 149/473 (31%), Gaps = 57/473 (12%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ +   I D + +++  +G   +ET          +          G   L D  G  +
Sbjct: 993  ELLLHGMIKDRLTSLFRKHGA--VETS---RQSLFPRSS----HYGPGAVRLLDPGGNLV 1043

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
             L YDLT P AR + +   ++             + R E  G       I          
Sbjct: 1044 QLPYDLTLPNARALPKQDLSVEKAFSFGTVYRESIHRGEPRGHKEVDFDIVSYNTLDLPL 1103

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
             E    ++   + D    +  K +     IN+  +L+ ++    +  + +   + ++ + 
Sbjct: 1104 KEAEVIKVLDEIIDEFPPL--KASQMCFHINHSDLLEAVVGFCRITPEQRPIVKEVISKL 1161

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHELYEL 258
               + ++ +Q ++  L           +    + S  ID +  F   D  EK++  L+ +
Sbjct: 1162 --NIGQYTMQRIRSELR----------SPSIGVPSTSIDDLSRFDFRDTPEKALSRLHAI 1209

Query: 259  VKGTIAGEK---GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
            + GT   ++    FN L ++   + K            + +    Y    +++ +     
Sbjct: 1210 MDGTEYADRLSPIFNRLNMLVSYLEKFKVKRKVYISPLSSLNDKFYNGSILFQCVFDKKR 1269

Query: 316  MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN----- 370
             +             GGRYD L+  F+         S  +   +   K   S TN     
Sbjct: 1270 RD---------VFAAGGRYDSLIQEFQPSLRSNRPRSHAVGFNLGLDKLNGSMTNYLKGS 1320

Query: 371  ------------NIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                        NI       +     D     +        L    I AE+   ++ + 
Sbjct: 1321 NKAFLKPDAEVGNIWRRNKCDVLVASFDPSVLRTVGVGIVSTLWANDISAELAADTTPSL 1380

Query: 418  GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             + L      N    +I       RG L++K + + ++      +   W    
Sbjct: 1381 EDLLTRYVDDNYSWVVIVKQDSIERG-LRVKSVQRKEDFDVRSSDLVPWLRNE 1432


>gi|326565857|gb|EGE16019.1| ATP phosphoribosyltransferase regulatory subunit [Moraxella
           catarrhalis BC1]
 gi|326570514|gb|EGE20554.1| ATP phosphoribosyltransferase regulatory subunit [Moraxella
           catarrhalis BC8]
          Length = 430

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 19/309 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    + + +  + D++  +   +G+  +  PL+EY++SL     ++    +  
Sbjct: 26  LPDGVADVLFTDAQKQESLRDALLFVLTAHGYRLVSPPLIEYTESLLNNADED--LKRQT 83

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D  +G+ + LR D+T  + R  ++    I    R   +G V +    G    R  +
Sbjct: 84  FKFIDQLNGRLMGLRADITPQILRIDSKYGQGIS---RYCYVGQVVKTLPTGLFGLRTPL 140

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     A+ E+  ++    + VG+ R   H+ I +  I D + +  G+   D 
Sbjct: 141 QLGAEIFGIDDICAELELIDLLVALADEVGLDRQMLHVDIGHVAIFDRLCQLHGVSNKDA 200

Query: 190 LNER-LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                +   +A+ +L K+    +   L                L+S++     + L+   
Sbjct: 201 DELIGIYHKKAMPELTKWCQN-MGNSLNSPSDATDFLVLAKHTLSSDRTPNAEALLNKLS 259

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +K+  +            +  NEL  ++  +R  G +   + I  T + G  Y+TG V+ 
Sbjct: 260 DKARQDNQ--------IIQAANELATLAAHIRAVGMS---VSIDVTELSGYHYHTGVVFN 308

Query: 309 AILGFPVMN 317
           A LG     
Sbjct: 309 AYLGNRTTQ 317


>gi|326564048|gb|EGE14292.1| ATP phosphoribosyltransferase regulatory subunit [Moraxella
           catarrhalis 12P80B1]
          Length = 430

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 19/309 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    + + +  + D++  +   +G+  +  PL+EY++SL     ++    +  
Sbjct: 26  LPDGVADVLFTDAQKQESLRDALLFVLTAHGYRLVSPPLIEYTESLLNNADED--LKRQT 83

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D  +G+ + LR D+T  + R  ++    I    R   +G V +    G    R  +
Sbjct: 84  FKFIDQLNGRLMGLRADITPQILRIDSKYGQGIS---RYCYVGQVVKTLPTGLFGLRTPL 140

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     A+ E+  ++    + VG+ R   H+ I +  I D + +  G+   D 
Sbjct: 141 QLGAEIFGIDDICAELELIDLLVALADEVGLDRQMLHVDIGHVAIFDRLCQLHGVSNKDA 200

Query: 190 LNER-LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                +   +A+ +L K+    +   L                L+S++     + L+   
Sbjct: 201 DELIGIYHKKAMPELTKWCQN-MGNSLNSPSDATDFLVLAKHTLSSDRTPNAEALLNKLS 259

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +K+  +            +  NEL  ++  +R  G +   + I  T + G  Y+TG V+ 
Sbjct: 260 DKARQDNQ--------IIQAANELATLAAHIRAVGMS---VSIDVTELSGYHYHTGVVFN 308

Query: 309 AILGFPVMN 317
           A LG     
Sbjct: 309 AYLGNRTTQ 317


>gi|153005365|ref|YP_001379690.1| histidine--tRNA ligase [Anaeromyxobacter sp. Fw109-5]
 gi|166219816|sp|A7HDB0|HISZ_ANADF RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|152028938|gb|ABS26706.1| Histidine--tRNA ligase [Anaeromyxobacter sp. Fw109-5]
          Length = 343

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 3/154 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L   LP G  D           +   ++ ++  +G+  +  P LE  D + + L      
Sbjct: 2   LDLSLPSGLRDLLPDHSAHLAELSAKLQEVFSQFGYRRLFLPTLERLDVVERGL--SAAA 59

Query: 67  NKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
              V    +   G+ +++R D+T  +AR  A   D +  P R    GPV R  +   GR 
Sbjct: 60  LADVMKFVEPGSGEVVAIRPDITPQIARLYAARPDALPSPARLCYDGPVLRAREARAGRP 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           R+  Q  V+ +G+   +ADAE  +++A  LE VG
Sbjct: 120 REVYQAGVELLGAGGASADAEALVVLARALERVG 153


>gi|227514677|ref|ZP_03944726.1| histidine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086986|gb|EEI22298.1| histidine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 386

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 62/355 (17%), Positives = 134/355 (37%), Gaps = 39/355 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +LP G  D    +   +  +   +  +++ + +  IET LLEY D  G +    +   +
Sbjct: 4   YKLPAGLRDNFGPQATQKESVRHYLTGLFQRHHYTLIETSLLEYRDVFGPY----ELQAE 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++ + + DGQ + LR DLT P+AR++A    ++        +G  FR  +   G + Q 
Sbjct: 60  SLYRILEADGQDLVLRPDLTLPIARFLATTNVSLPTSFA--YVGEQFRRNRQLTGLYNQS 117

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ VG  +  A+ E   ++++    +        + +   ++ D +L  +      
Sbjct: 118 TQAGIELVGFQSRRAELECLTVISELNRDL--FNGRLLVELGQARLADLVLADLPASERQ 175

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           K   +  +        +  +   K                 A++  + +  +        
Sbjct: 176 KEAIKAALFNKNVPDYEAAIAPFKRERHYPFLVEWTWLFGKADVVEKMVAPLW------- 228

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                          A  +   E++ +++LV + G     + +  +      YYTG  ++
Sbjct: 229 ------------VNPAAREAMQEVLDLAKLVAQLGDQE--LLVDFSTAAPQAYYTGVTFK 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           A                  +  GGRYD L++ F+ ++ PA G  I ++ +   L+
Sbjct: 275 AYADQTST----------YLVSGGRYDNLLANFQEKSEPAIGLGIDVTLIAQLLE 319


>gi|47221603|emb|CAF97868.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 604

 Score = 91.1 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 57/475 (12%), Positives = 120/475 (25%), Gaps = 64/475 (13%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N + D I+  Y   GF  + TP L YS +L +     +  +  +F++  + 
Sbjct: 180 FLPKGAHIYNTLTDFIKGEYRRRGFTEVVTPTL-YSTALWERSGHWEHYSDNMFTVTSEG 238

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               +L+             +        R+++  P+   +  G     +          
Sbjct: 239 SHTYALKPMNCP-------AHCLMFEQRVRSWKELPLRWADF-GALHRNELSGALGGLTR 290

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR--KILDGILEKIGLHG--DDKLNER 193
                 D        + LE   +   D+   +          +L         + +  + 
Sbjct: 291 VRRFCQDDAHIFCAPEQLETEIVSCLDFVRHVYQVFGFSFHCLLSTRPTPCLGEPEQWDN 350

Query: 194 LIVLRAIDKLDKFGL-----QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                A  +           +  +  L   + +   D   G                   
Sbjct: 351 AEQGAAAGEEPAAVWPTLGAEPRRRSLLWTKGEQEEDLGPGPGRRRSV------------ 398

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVY 307
                       G    +   +E     +           I+I   I R  +  T    +
Sbjct: 399 ------------GYFTSQSSPDEGEEGRQTRSCVLSPQIDIQIRDAIGRQHQCATIQLDF 446

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +  L F +                          +   +           + +  ++   
Sbjct: 447 QLPLRFDLQYVGPD----------------GQLHRPVMIHRAVLGSLERMIAILAENFGG 490

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                     V++  +  DS+S SK      Q  R AG   ++          +++ A  
Sbjct: 491 KWPLWLSPAQVMVIPVGGDSESYSKQVSGVVQEFRHAGFMVDLNSDQGATLNKKIRSAQL 550

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                  + G  E     + ++    GK+L R            + Q+    S L
Sbjct: 551 SQYNYIFVVGEKESESRTVSVRS-RGGKQLGRR---PTEEVLTSLTQLRDARSNL 601


>gi|326573115|gb|EGE23084.1| ATP phosphoribosyltransferase regulatory subunit [Moraxella
           catarrhalis CO72]
          Length = 430

 Score = 91.1 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 68/356 (19%), Positives = 139/356 (39%), Gaps = 26/356 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    + + +  + D++  +   +G+  +  PL+EY++SL     ++    +  
Sbjct: 26  LPDGVADVLFTDAQKQESLRDALLFVLTAHGYRLVSPPLIEYTESLLNNADED--LKRQT 83

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D  +G+ + LR D+T  + R  ++    I    R   +G V +    G    R  +
Sbjct: 84  FKFIDQLNGRLMGLRADITPQILRIDSKYGKGIS---RYCYVGQVVKTLPTGLFGLRTPL 140

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     A+ E+  ++    + +G+ R   H+ I +  I D + +  G+   D 
Sbjct: 141 QLGAEIFGIDDICAELELIDLLVALADEIGLDRQMLHVDIGHVAIFDRLCQLHGVSNKDA 200

Query: 190 LNER-LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                +   +A+ +L K+    +   L                L+S++     + L+   
Sbjct: 201 DELIGIYHKKAMPELTKWCQN-MGNSLNSPSDATDFLVLAKHTLSSDRTPNAEALLNKLS 259

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +K+  +            +  NEL  ++  +R  G +   + I  T + G  Y+TG V+ 
Sbjct: 260 DKARQDNQ--------IIQAANELATLAAHIRAVGMS---VSIDVTELSGYHYHTGVVFN 308

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             LG      +       ++  GGR++G+ +    +        I      V L+ 
Sbjct: 309 VYLGNRTTQTQ-------ALVRGGRFNGISTHSVARGATGFSMDINRLLEFVELEE 357


>gi|326479926|gb|EGE03936.1| PEK/GCN2 protein kinase [Trichophyton equinum CBS 127.97]
          Length = 1570

 Score = 91.1 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 69/473 (14%), Positives = 147/473 (31%), Gaps = 57/473 (12%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ +   + D +  ++  +G   +ET          +          G   L D  G  +
Sbjct: 972  ELLLHGVVKDKLTALFRKHGA--VETC---RQSLFPRSS----HYGPGAVRLLDPGGNLV 1022

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
             L YDLT P AR + +   +I             V R E  G       I          
Sbjct: 1023 QLPYDLTLPNARALPKQDLSIEKAFSFGTVYRESVHRGEPRGHKEVDFDIVSYNTLDLPL 1082

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
             E    ++   + D    +  +       +N+  +L+ ++    +  + +   + ++ + 
Sbjct: 1083 KEAEVIKVLDEIIDEFPPL--RSTQMCFHLNHSDLLEAVVAFCRITPEQRPIVKEVISKL 1140

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHELYEL 258
               + ++ +Q ++  L           +    ++S  ID +  F   D  +K++  L+ +
Sbjct: 1141 --NIGQYTMQKIRSELR----------SPSIGVSSTSIDDLSRFDFRDTPQKALSRLHAI 1188

Query: 259  VKGTIAGEK---GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
            + GT   ++    FN L ++   + K            + +    Y    +++ +     
Sbjct: 1189 MDGTEYADRLSPIFNRLNIVVSYLEKFKVKRKVYISPLSSLNDKFYNGSVLFQCVFDKKR 1248

Query: 316  MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN----- 370
             +             GGRYD L+  F+         S  +   +   K   S TN     
Sbjct: 1249 RD---------VFAAGGRYDSLIQEFQPILRSNRPRSHAVGFNLGLDKLNGSMTNYLKGS 1299

Query: 371  ------------NIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                        N        +     D     +        L    I AE+   ++ + 
Sbjct: 1300 NKSFLKPDAEVGNSWRKIRCDVLVASFDPSVLRTVGVGIVSTLWAHDISAELAADTTPSL 1359

Query: 418  GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             + L      N    +I       RG L++K + + ++      +   W    
Sbjct: 1360 EDLLTRYVDDNYSWVVIVKQDSIERG-LRVKSIQRKEDFDVRSSDLIPWLRNE 1411


>gi|322372745|ref|ZP_08047281.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus sp.
           C150]
 gi|321277787|gb|EFX54856.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus sp.
           C150]
          Length = 326

 Score = 91.1 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 74/361 (20%), Positives = 134/361 (37%), Gaps = 48/361 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T     L  G  D   K  R   +I   I ++    GF  IETP LE+ +      
Sbjct: 1   MKKTT-----LALGMHDKLFKRARTMYQIEHRICDLLMTKGFLRIETPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D  + G ++  D +G  +SLR D+T+ + R +A     +  P +    G VF   + 
Sbjct: 52  --SDVVDNGNYNFFDKNGDLVSLRPDITSQIGRVIAS--TQVHTPIKFSYSGKVFNYNEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  V+ +G     A  E      + L+A G+K  +Y    ++ ++L  I E
Sbjct: 108 MRGLSNEHTQAGVEIIGFPVHQALEEAIASAKEALDAAGVK--NYKFEFSHARLLQLIFE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++ L    +                     +   + +       +FTK      + +   
Sbjct: 166 ELNLPAVKEA-------------------ELAAYIRDKSITGLKEFTKENPSQYDMVLEQ 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +    + +  + +  + A     + L V++  +     +     +    +  + 
Sbjct: 207 LPFLFGETNAVLTKARQ-LTDSEAFLTALDSLEVLTNRLSD---SLPETTLDLAQLPAVP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++               V  +   GGRYD L  RF    + A G++I I  +  
Sbjct: 263 YYTGMMFKVF----------GDKVPDAFVSGGRYDKLFERFGATELTAVGWAIDIDSVYQ 312

Query: 361 A 361
           A
Sbjct: 313 A 313


>gi|254432190|ref|ZP_05045893.1| histidyl-tRNA synthetase family protein [Cyanobium sp. PCC 7001]
 gi|197626643|gb|EDY39202.1| histidyl-tRNA synthetase family protein [Cyanobium sp. PCC 7001]
          Length = 391

 Score = 91.1 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 5/124 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +E+    RI   +  +Y  +G+  +  P  E  D+L          
Sbjct: 1   MALQPAAGARDLNPREVERNRRICADLAAVYRRWGYQEVAPPGFERLDTLAAGGG---ID 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +  L     + + LR +LTA +AR  +     +  P R +  G  FR+     G  R
Sbjct: 58  SRELVRLA--ADEPLGLRPELTASIARAASTRLAGLPRPLRLWAEGSTFRSSVADTGMQR 115

Query: 127 QFIQ 130
              Q
Sbjct: 116 IHEQ 119


>gi|298368428|ref|ZP_06979746.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298282431|gb|EFI23918.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 383

 Score = 91.1 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 71/416 (17%), Positives = 138/416 (33%), Gaps = 53/416 (12%)

Query: 7   LRA-ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           ++  +LP   AD      R      + +  ++  +G++ ++ PL+EYS SL   + +   
Sbjct: 1   MQPWQLPEHVADILPTAARQLESAREQVLELFRVHGYELVQPPLMEYSGSLLTHIDEG-- 58

Query: 66  PNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            +     + D   G+ + +R D+T  +AR  A          R    GPV      G   
Sbjct: 59  LSLKTIRVADQISGRQLGIRADITPQVARIDAHLLSANEGINRLCYAGPVLHARPDGLLN 118

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            R+ +Q   +  G +   AD E+  +M  ++           + + +  +   +     L
Sbjct: 119 TREPLQVGAELYGFAGVAADIELIDLMLKSMGI--ADIGGVLLSLGHIGVFRALARAADL 176

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                     ++    DK      + V     +G    +                     
Sbjct: 177 DEVRAARLLSLM---QDKDASAVSEQVAAWRLDGMWAKAFALLPTL-------------- 219

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                + +      +    A  +  +EL  + +      + S ++ +  + +R  EY+TG
Sbjct: 220 -YGGREILARARAELPDLSAVGEALDELEAVCK-----AFPSQQVHVDLSELRVDEYHTG 273

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            ++ A                 +V  GGRYDGL + F  ++ PATGFS  +   +  L +
Sbjct: 274 LLFAAYGSN----------CREAVARGGRYDGLGAYFG-RSRPATGFSFDMRTFVGRLPA 322

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           ++                                 LR  G    +  G   N G+Q
Sbjct: 323 IKRLPLVAVAHEDAEEAEEAIG------------RLRAQGQCVVVDYGVGYN-GSQ 365


>gi|329114999|ref|ZP_08243754.1| ATP phosphoribosyltransferase regulatory subunit [Acetobacter
           pomorum DM001]
 gi|326695442|gb|EGE47128.1| ATP phosphoribosyltransferase regulatory subunit [Acetobacter
           pomorum DM001]
          Length = 394

 Score = 91.1 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 7/197 (3%)

Query: 1   MGKKTKLRAEL-PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           M +       L P GF D  T + R     + ++ +++ ++G+D +  PL+E+ D+    
Sbjct: 13  MTEDPPFSPALLPAGFVDFLTPDARTEAEGVATLMDVFASHGYDRVRPPLIEFEDTYLAG 72

Query: 60  LPDEDRPNKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG-PVFRN 117
                   +  F + D D  + + LR D+T  +AR  A    +   P R    G  V  +
Sbjct: 73  A--GAALAEQSFRVMDPDTRRMMVLRPDITPQVARMAATRVASTPRPLRVSYAGVCVVVS 130

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
                   RQ +Q  ++ +G  +  ADAE+  + A+ LE +G+K  D    +     +  
Sbjct: 131 PVAAEESSRQIMQTGIELIGPDSPEADAEVMSVGAEALERLGVK--DVSFDLTMPPFIPA 188

Query: 178 ILEKIGLHGDDKLNERL 194
           +LE+  +    +     
Sbjct: 189 LLEEGNVPEAQRAALMR 205


>gi|74316624|ref|YP_314364.1| ATP phosphoribosyltransferase regulatory subunit [Thiobacillus
           denitrificans ATCC 25259]
 gi|109892457|sp|Q3SL58|HISZ_THIDA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|74056119|gb|AAZ96559.1| ATP phosphoribosyltransferase regulatory subunit [Thiobacillus
           denitrificans ATCC 25259]
          Length = 321

 Score = 91.1 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 102/298 (34%), Gaps = 14/298 (4%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D    +      +  ++ +++   G+  +  PL+EY +SL   +  +       
Sbjct: 6   LPENVEDVLPPQAWRLEAMRRALLDLFRERGYQLVIPPLIEYVESLLTGVGADLDLK--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ +++R D+T  +AR  A +        R    G V   +  G  R R+ I
Sbjct: 64  FKLVDQLSGRLMAVRADITPQVARIDA-HLLGANAINRLCYTGSVLHTQSDGFHRSREPI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M   L A G++     + + +  +   + ++ G     +
Sbjct: 123 QIGAEVYGDAGIEADLEILSLMLQGLAACGVEGVQ--LDVGHVGVYRALAQEAGFDNATE 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A+   D   +  +   L     D      +         +       +   
Sbjct: 181 HELFC----ALQAKDASAVDVLTAGLPMALRDAFAALPQLYGGREVLAEARARLPHLPAV 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +  +    +   + G     EL      +R  GY+S  +  + T  R      G  Y
Sbjct: 237 AAALDTLVSLDQALGGV----ELAYDLAELRGYGYHSGVVFAAYTRGRSHAIAQGGRY 290


>gi|327300679|ref|XP_003235032.1| PEK/GCN2 protein kinase [Trichophyton rubrum CBS 118892]
 gi|326462384|gb|EGD87837.1| PEK/GCN2 protein kinase [Trichophyton rubrum CBS 118892]
          Length = 1591

 Score = 90.7 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 71/473 (15%), Positives = 147/473 (31%), Gaps = 57/473 (12%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ +   I D +  ++  +G   +ET          +          G   L D  G  +
Sbjct: 993  ELLLHGVIKDKLTALFRKHGA--VETC---RQSLFPRSS----HYGPGAVRLLDPGGNLV 1043

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
             L YDLT P AR + +   +I             V R E  G       I          
Sbjct: 1044 QLPYDLTLPNARALPKQDLSIEKAFSFGTVYRESVHRGEPRGHKEVDFDIVSYNTLDLPL 1103

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
             E    ++   + D   ++  K       +N+  +L+ ++    +  + +   + ++ + 
Sbjct: 1104 KEAEVIKVLDEIIDEFPSL--KSTQMCFHLNHSDLLEAVVAFCRITPEQRPIVKEVISKL 1161

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHELYEL 258
               + ++ +Q ++  L           +    + S  ID +  F   D  +K++  L+ +
Sbjct: 1162 --NIGQYTMQKIRSELR----------SPSIGVPSTSIDDLSRFDFRDTPQKALSRLHAI 1209

Query: 259  VKGTIAGEK---GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
            + GT   ++    FN L ++   + K            + +    Y    +++ +     
Sbjct: 1210 MDGTEYADRLSPIFNRLNIVVSYLEKFKVKRKVYISPLSSLNDKFYNGSVLFQCVFDKKR 1269

Query: 316  MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN----- 370
             +             GGRYD L+  F+         S  +   +   K   S TN     
Sbjct: 1270 RD---------VFAAGGRYDSLIQEFQPILRSNRPRSHAVGFNLGLDKLNGSMTNYLKGS 1320

Query: 371  ------------NIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                        N        +     D     +        L    I AE+   ++ + 
Sbjct: 1321 NKSFLKPDAEVGNSWRKNKCDVLVASFDPSVLRTVGVGIVSTLWAHDISAELAADTTPSL 1380

Query: 418  GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             + L      N    +I       RG L++K + + ++      +   W    
Sbjct: 1381 EDLLTRYVDDNYSWVVIVKQDSIERG-LRVKSVQRKEDFDVRSSDLVPWLRNE 1432


>gi|326561369|gb|EGE11725.1| ATP phosphoribosyltransferase regulatory subunit [Moraxella
           catarrhalis 46P47B1]
          Length = 430

 Score = 90.7 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 61/308 (19%), Positives = 119/308 (38%), Gaps = 17/308 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    + + +  + D++  +   +G+  +  PL+EY++SL     ++    +  
Sbjct: 26  LPDGVADVLFTDAQKQESLRDALLFVLTAHGYRLVSPPLIEYTESLLNNADED--LKRQT 83

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D  +G+ + LR D+T  + R  ++    I    R   +G V +    G    R  +
Sbjct: 84  FKFIDQLNGRLMGLRADITPQILRIDSKYGQGIS---RYCYVGQVVKTLPTGLFGLRTPL 140

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G     A+ E+  ++    + +G+ R   H+ I +  I D + +  G+   D 
Sbjct: 141 QLGAEIFGIDDICAELELIDLLVALADEIGLDRQMLHVDIGHVAIFDRLCQLHGVSNKDA 200

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                I  +          Q +   L                L+S++     + L+   +
Sbjct: 201 DELIGIYHKKAMPELTKWYQNMGNSLNSPSDATDFLVLAKHTLSSDRTPNAEALLNKLSD 260

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K+  +            +  NEL  ++  +R  G +   + I  T + G  Y+TG V+ A
Sbjct: 261 KARQDNQ--------IIQAANELATLAAHIRAVGMS---VSIDVTELSGYHYHTGVVFNA 309

Query: 310 ILGFPVMN 317
            LG     
Sbjct: 310 YLGNRTTQ 317


>gi|260662264|ref|ZP_05863160.1| histidyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN]
 gi|260553647|gb|EEX26539.1| histidyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN]
          Length = 386

 Score = 90.7 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 61/355 (17%), Positives = 133/355 (37%), Gaps = 39/355 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +LP G  D    +   +  +   +  +++ + +  IET LLEY D  G +    +   +
Sbjct: 4   YKLPAGLRDNFGPQATQKESVRHYLTGLFQRHHYTLIETSLLEYRDVFGPY----ELQAE 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++ + + DGQ + LR DLT P+AR++     ++        +G  FR  +   G + Q 
Sbjct: 60  SLYRILEADGQDLVLRPDLTLPIARFLVTTNVSLPTSFA--YVGEQFRRNRQLTGLYNQS 117

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ VG  +  A+ E   ++++    +        + +   ++ D +L  +      
Sbjct: 118 TQAGIELVGFQSRRAELECLTVISELNRDL--FNGRLLVELGQARLADLVLADLPASERQ 175

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           K   +  +        +  +   K                 A++  + +  +        
Sbjct: 176 KEAIKAALFNKNVPDYEAAIAPFKRERHYPFLAEWTWLFGKADVVEKMVAPLW------- 228

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                          A  +   E++ +++LV + G     + +  +      YYTG  ++
Sbjct: 229 ------------VNPAAREAMQEVLDLAKLVAQLGDQE--LLVDFSTAAPQAYYTGVTFK 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           A                  +  GGRYD L++ F+ ++ PA G  I ++ +   L+
Sbjct: 275 AYADQTST----------YLVSGGRYDNLLANFQEKSEPAIGLGIDVTLIAQLLE 319


>gi|184155231|ref|YP_001843571.1| histidyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|229464986|sp|B2GBQ9|HISZ_LACF3 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|183226575|dbj|BAG27091.1| histidyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 386

 Score = 90.7 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 61/355 (17%), Positives = 134/355 (37%), Gaps = 39/355 (10%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            +LP G  D    +   +  +   +  +++ + +  IET LLEY D  G +    +   +
Sbjct: 4   YKLPAGLRDNFGPQATQKESVRHYLTGLFQRHHYTLIETSLLEYRDVFGPY----ELQAE 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            ++ + + DGQ + LR DLT P+AR++     ++        +G  FR  +   G + Q 
Sbjct: 60  SLYRILEADGQDLVLRPDLTLPIARFLVTTNVSLPTSFA--YVGEQFRRNRQLTGLYNQS 117

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ VG  +  A+ E   ++++    +        + +   ++ D +L  +  +   
Sbjct: 118 TQAGIELVGFQSRRAELECLTVISELNRDL--FNGRLLVELGQARLADLVLADLPANERQ 175

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           K   +  +        +  +   K                 A++  + +  +        
Sbjct: 176 KEAIKAALFNKNVPDYEAAIAPFKRERHYPFLAEWTWLFGKADVVEKMVAPLW------- 228

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                          A  +   E++ +++LV + G     + +  +      YYTG  ++
Sbjct: 229 ------------VNPAAREAMQEVLDLAKLVAQLGDQE--LLVDFSTAAPQAYYTGVTFK 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           A                  +  GGRYD L++ F+ ++ PA G  I ++ +   L+
Sbjct: 275 AYADQTST----------YLVSGGRYDNLLANFQEKSEPAIGLGIDVTLIAQLLE 319


>gi|78212932|ref|YP_381711.1| ATP phosphoribosyltransferase regulatory subunit [Synechococcus sp.
           CC9605]
 gi|109892455|sp|Q3AJS6|HISZ_SYNSC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|78197391|gb|ABB35156.1| Histidine--tRNA ligase [Synechococcus sp. CC9605]
          Length = 392

 Score = 90.3 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 65/414 (15%), Positives = 135/414 (32%), Gaps = 45/414 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++    ++ + + ++Y  +G+D +  P +E   +L          
Sbjct: 1   MALQPAAGAKDLNPRQVETNRQLTERLASVYRLWGYDEVSPPRVERLATLMAGGA---ID 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  +  L       + LR ++TA +AR     F     P R +  G VFR      G   
Sbjct: 58  SSDIVRLV--ADDPLGLRPEMTASIARAACTRFADRQRPLRLWASGTVFRTRSADEGGQC 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                           ++AEM ++                       +L   ++ +GL  
Sbjct: 116 IEENLQSGVELFGVSGSEAEMELL----------------------SLLMASVQTLGLQT 153

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             K    L     +D + +     V+  +     D      +  +L   +   ++S   +
Sbjct: 154 SQKPRLLLGHTALMDLVLRPFNGAVRDQIRTALIDFDRLAIESFDLAYAEKTRLLSL--M 211

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELV-RKSGYNSNRIKISSTIVRGLEYYTGC 305
           D   +  ++   +      +  F+EL  +   +   +   +  I++  T     E YTG 
Sbjct: 212 DCRGTPDQVLAQLSSLYGEQPVFDELRRLCTHLASAAQAQAVTIQLDPTFQPHFELYTGL 271

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN--VPATGFSIGISRLIVALK 363
           V++ +                    GGRYD LV R    +      GFS+ I  +   + 
Sbjct: 272 VFQLVC--------DGRSSPVVFARGGRYDDLVRRCGATDDRAFGAGFSLAIDPIRELIS 323

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
            L+++     +     +      + +L       +     G  A M L    + 
Sbjct: 324 DLDAAEQQQSD-----VLIAFSTASNLESAMERQRSWHEQGRTAVMALEPLSSM 372


>gi|257455316|ref|ZP_05620551.1| ATP phosphoribosyltransferase regulatory subunit [Enhydrobacter
           aerosaccus SK60]
 gi|257447278|gb|EEV22286.1| ATP phosphoribosyltransferase regulatory subunit [Enhydrobacter
           aerosaccus SK60]
          Length = 431

 Score = 90.3 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 66/409 (16%), Positives = 134/409 (32%), Gaps = 36/409 (8%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D  + E   +  +   +  I  ++G++ I  P++EY++SL  +  ++       
Sbjct: 27  LPDGVVDLLSTEAVKQETLRYQLTRILISHGYEFISPPMIEYTESLLGYASED--VKLQT 84

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAE-NFDTIV----FPCRTYRIGPVFRNEKHGPGR 124
           F + D   G+ + +R D+T  +AR  A  + +            Y               
Sbjct: 85  FKIIDQLTGRLMGVRADITPQIARIDARLHNNQDTSNPSKSISRYCYAGHVIYTMPKGLF 144

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             +        +  +   A     + +  TL          HI I +  I   + +   +
Sbjct: 145 GSRTPLQLGAEIFGTDSLASEVELLDVLFTLLDSTDVIARSHIDIGHVAIFQQLCQLASV 204

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                L E+LI L A   L       +KLL  + R    G+F     +  E         
Sbjct: 205 P--THLQEKLIELYANKALP-----ELKLLTSKMR--QFGEFANDFYVLGEA-------- 247

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             DL+K    L    K      K  ++L  +   +      +  + ++     G  Y+TG
Sbjct: 248 GNDLQKLSERLSNQAKHDAIIAKALSDLTYLVSHLENHWDANVSVDVT---GLGYHYHTG 304

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            V+   +    +     P++ G       +  + +    ++       +   +  + +  
Sbjct: 305 VVFNVYVADESL-----PLIRGGRFSNHFHHEIDNTDAVRSGVGFSCELNRWQNHIQVHE 359

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
              +      +  +L      D+ +L +       LR  G R  + L  
Sbjct: 360 QPFTVVPYSHVQTILHVPNHPDAPALKQAI---DSLRQEGHRVMIALDE 405


>gi|33240386|ref|NP_875328.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
 gi|46395737|sp|Q7VC06|HISZ_PROMA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|33237913|gb|AAP99980.1| ATP phosphoribosyltransferase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 391

 Score = 90.3 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 101/256 (39%), Gaps = 19/256 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +E+R    I   + +IYE +G++ +  P +E  ++L          
Sbjct: 1   MPIQPAFGNKDLNPQEVRKNQLISSRLSSIYERWGYEEVSPPKVERLETLTACGG---IS 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           NK +  L       I LR D+TA +AR  +        P R +  G +F++++   G+F 
Sbjct: 58  NKEIVKLV--ADDPIGLRPDMTASIARAASTRLAYKDRPLRLWTSGTIFKSKEDCDGKFV 115

Query: 127 QFI--QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIG 183
                Q  V+ +G S   A+ E+  ++ D++  + I  N    + I ++ IL  IL  I 
Sbjct: 116 IEEGLQSGVELIGISDMAAEIELLYLLLDSMNQLEICSNQNPILLIGHQSILKLILSGIS 175

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               +K+ + L                V+    +   +      K   +     D++   
Sbjct: 176 NDYKNKIQKYLTNYDL-----------VETEDLDIDIEIKNKLLKVLKIRGNPSDVLDKL 224

Query: 244 LSIDLEKSMHELYELV 259
           ++I    ++ +    +
Sbjct: 225 VNIYGSNTLFDELRRL 240


>gi|119897228|ref|YP_932441.1| ATP phosphoribosyltransferase regulatory subunit [Azoarcus sp.
           BH72]
 gi|166219817|sp|A1K3Z9|HISZ_AZOSB RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|119669641|emb|CAL93554.1| conserved hypothetical ATP phosphoribosyltransferase regulatory
           subunit [Azoarcus sp. BH72]
          Length = 384

 Score = 90.3 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 67/359 (18%), Positives = 122/359 (33%), Gaps = 42/359 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R  LP    D    E      +   + + +   G+  +  PLLEY DSL      + + 
Sbjct: 1   MRWVLPDHIQDALPSEAASLEALRRRLLDAFRVRGYQLVMPPLLEYLDSLTTGAGQDLKL 60

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               F L D   G+ + +R D+T  + R  A +        R    G V           
Sbjct: 61  R--TFKLVDQVSGRTMGVRADMTPQVTRIDA-HLLNRAGVSRLCYCGSVLHTLPSTLTAT 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+ +Q   +  G +   AD E+  ++AD L    +      I I +  +   +    G+ 
Sbjct: 118 REPLQLGAELYGHAGIDADIEIVRLLADVLRLAEVPA--SRIDIGHVGLFHALAALAGMV 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            + +                   + +  LL         + T G         + +  L 
Sbjct: 176 PERE-------------------EELFDLLQAKDVPGLKEITVGVAEPVRTALLRLPALY 216

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + + E    +  +       ++L  ++  +         I      +RG  Y++G 
Sbjct: 217 G-GAEVIDEAAACMPESAEIRAALDDLRRLAAALEDL-----PISFDLADLRGYHYHSGV 270

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
           V+ A  G              ++  GGRYD +   F  +  PATGFS+ +  L + L +
Sbjct: 271 VFAAYGG----------GSPAALALGGRYDRVGEAFG-RARPATGFSLDLRELALRLPA 318


>gi|319943730|ref|ZP_08018011.1| ATP phosphoribosyltransferase regulatory subunit [Lautropia
           mirabilis ATCC 51599]
 gi|319742963|gb|EFV95369.1| ATP phosphoribosyltransferase regulatory subunit [Lautropia
           mirabilis ATCC 51599]
          Length = 393

 Score = 89.9 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 80/412 (19%), Positives = 137/412 (33%), Gaps = 48/412 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G +D      +    +  ++ + Y  +GF+ +  PL+EY DSL      +       
Sbjct: 7   LPEGISDLLPDAAQDLEGLRRALLDTYRRHGFELVLPPLVEYLDSLLIGSGGDLDLK--T 64

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   GQ + +R D+T  ++R  A +        R      V R    G    R+ I
Sbjct: 65  FKLVDQLSGQSLGVRADITPQVSRIDA-HLLQQRDINRLCYAASVLRTRPSGQEGSREPI 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADT--LEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           Q   +  G +   AD E+  ++  +  L  +G  R D             I         
Sbjct: 124 QIGAEVYGHAGIEADIEVIDLLLQSLALAELGPVRLD-------------INHLGLASLL 170

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
               E +     +  L    L  ++ LL       +                        
Sbjct: 171 LAELEGVDEEAVLQLLQARDLPSLRELLAPWSQQPAAAALLALPE-----------CFGP 219

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVR-KSGYNSNRIKISSTIVRGLEYYTGCV 306
            E +M     ++          + L  +   +R         + I    V+G  Y+TG  
Sbjct: 220 AESAMARARTVLAPWPQATPHLDALDAVLGSLRLARHAGQVSLAIDLADVQGFRYHTGLG 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           + A +               +VG GGRYDG+ + F     PATGFS+ +  L+   +   
Sbjct: 280 FAAYVE----------GHARAVGRGGRYDGIGAAFGRG-RPATGFSLDLRELVELRRDRH 328

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML------RTAGIRAEMFLG 412
           +    I          +       ++ +   Q+L      R AG+ A+  +G
Sbjct: 329 TPPAIIVAPWSDDPALLAFIDTLRAQGETVLQLLPGQDAQRLAGVSADRMIG 380


>gi|238494360|ref|XP_002378416.1| protein kinase (Gcn2), putative [Aspergillus flavus NRRL3357]
 gi|220695066|gb|EED51409.1| protein kinase (Gcn2), putative [Aspergillus flavus NRRL3357]
          Length = 1601

 Score = 89.9 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 77/515 (14%), Positives = 155/515 (30%), Gaps = 60/515 (11%)

Query: 10   ELPRGFADC--------PTK--EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            + P+ F D              E+ ++  + + + +I+  +G        +E +  +   
Sbjct: 985  QSPKKFEDIAWDMDSRGTPAANELLVQGLVKERLTSIFRRHG-------SVETTRQML-- 1035

Query: 60   LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             P     N G   L D  G  + L +DLT P AR +     ++        +     +  
Sbjct: 1036 FPRSQHYNNGAVRLLDSTGNVLQLPFDLTLPNARAIPRQDPSLEKTFAFGTVYRETSHGG 1095

Query: 120  HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                           N    A      + ++     E   ++       +N+  +L  +L
Sbjct: 1096 EPRTHKEVDFDIVSHNTLDLALKEAEVIKVLDEIIEEFPPLRSASMCFLVNHSDLLQLVL 1155

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            E   +        + ++ +    + K+ +Q ++  L           +    + S  +D 
Sbjct: 1156 EFCRITPSQIPLVKEVISKL--NVGKWTMQKIRSELR----------SPAIGVASTSLDE 1203

Query: 240  MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRG 298
            +  F   D  K   ++ + ++  + G +    L  I   +           +     V  
Sbjct: 1204 LARFDFRDSPK---QMQKRLRDIMEGTEFAERLTPIFVRINWLMGYLKSFDVKRKVYVNP 1260

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFS 352
            L       +   + F  + + ++  VF     GGRYD LV  F+           A GF+
Sbjct: 1261 LGSLNDKFFRGSILFQCVFDNKRRDVF---AAGGRYDSLVQEFRPKVLASRPQTHAVGFN 1317

Query: 353  IGISRLIVALKS------------LESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQM 399
            +   RL  A+               E       +     +     DS     K     Q 
Sbjct: 1318 LSWDRLSSAMLEYIKGSSKSHLKHHEVEPAAFWKTRRCDVLVASFDSKILRKKGIEVVQD 1377

Query: 400  LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            L    I AE+ + +S +    L      N    +I     + RG  +++ L   +E    
Sbjct: 1378 LWANDISAELAVDAS-SLEELLTKYKDHNHSWIVIVKQDSQERG-FKVRCLVPKEEFDLR 1435

Query: 460  IKNNESWREARVAQITIPISELVSTVKKILQENKE 494
                  W    +          V   +  L    +
Sbjct: 1436 SSELIPWLRNEIRARN-QREGAVDFRQSRLPSQPD 1469


>gi|325690490|gb|EGD32493.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK115]
          Length = 329

 Score = 89.9 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 131/362 (36%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPNHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+      +     
Sbjct: 166 SLALDSQEEAQ-------------------LLDYIRKKNRTGLFEFTQTRPSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V      E+    L  + ++++      ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIVDN----EQILTALDDVEQVLQSLSGLLDQTTMDLGQVATMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|255021655|ref|ZP_05293697.1| ATP phosphoribosyltransferase regulatory subunit [Acidithiobacillus
           caldus ATCC 51756]
 gi|254968915|gb|EET26435.1| ATP phosphoribosyltransferase regulatory subunit [Acidithiobacillus
           caldus ATCC 51756]
          Length = 404

 Score = 89.9 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 125/398 (31%), Gaps = 47/398 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP GF D          +   ++ +++  +G+  +  P+LE+ +SL      +       
Sbjct: 12  LPAGFEDLGPARAEALEKHRRALLDLFARWGYRLVIPPMLEHLESLLTGSAADLDL--QT 69

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           + + D    + +  R D+T  +AR  A+         R    G V R      G  R   
Sbjct: 70  WKVLDQASSRLLGFRSDMTPQMARMDAQMSRDHDQR-RLCYAGTVLRALPDALGGSRAPY 128

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +    D E+  ++ +++           + + +  +   ++  +GL    +
Sbjct: 129 QVGAECFGVAGPEGDLEILSLLIESVALCQDTEG-CVLDLGHVAVARSLVAALGLEQTLE 187

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 V R         L+GV             DFT  A L                 
Sbjct: 188 ARVLAAVERKAWPDLHALLEGVPER-----ASARADFTVLAGL-------------HGGR 229

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +     L+       +   EL  + E +    Y    I+     + G  Y+TG ++  
Sbjct: 230 EVLERARSLLGHRPVVRRALEELDFVWEAL-HGRYPHLAIQCDLAELHGHRYHTGMLFAV 288

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                       P     +  GGRYDG+   F     PATGFS+        LK L   +
Sbjct: 289 Y----------GPQRGEPLAQGGRYDGIGRSFGC-ERPATGFSLD-------LKPLLRDS 330

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                   +        +   S        LR  G   
Sbjct: 331 LEPARGPRIWAPASVDTALWRS-----ISDLRAQGYIV 363


>gi|169777233|ref|XP_001823082.1| protein kinase (Gcn2) [Aspergillus oryzae RIB40]
 gi|83771819|dbj|BAE61949.1| unnamed protein product [Aspergillus oryzae]
          Length = 1596

 Score = 89.9 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 77/515 (14%), Positives = 155/515 (30%), Gaps = 60/515 (11%)

Query: 10   ELPRGFADC--------PTK--EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            + P+ F D              E+ ++  + + + +I+  +G        +E +  +   
Sbjct: 980  QSPKKFEDIAWDMDSRGTPAANELLVQGLVKERLTSIFRRHG-------SVETTRQML-- 1030

Query: 60   LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             P     N G   L D  G  + L +DLT P AR +     ++        +     +  
Sbjct: 1031 FPRSQHYNNGAVRLLDSTGNVLQLPFDLTLPNARAIPRQDPSLEKTFAFGTVYRETSHGG 1090

Query: 120  HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                           N    A      + ++     E   ++       +N+  +L  +L
Sbjct: 1091 EPRTHKEVDFDIVSHNTLDLALKEAEVIKVLDEIIEEFPPLRSASMCFLVNHSDLLQLVL 1150

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            E   +        + ++ +    + K+ +Q ++  L           +    + S  +D 
Sbjct: 1151 EFCRITPSQIPLVKEVISKL--NVGKWTMQKIRSELR----------SPAIGVASTSLDE 1198

Query: 240  MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRG 298
            +  F   D  K   ++ + ++  + G +    L  I   +           +     V  
Sbjct: 1199 LARFDFRDSPK---QMQKRLRDIMEGTEFAERLTPIFVRINWLMGYLKSFDVKRKVYVNP 1255

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFS 352
            L       +   + F  + + ++  VF     GGRYD LV  F+           A GF+
Sbjct: 1256 LGSLNDKFFRGSILFQCVFDNKRRDVF---AAGGRYDSLVQEFRPKVLASRPQTHAVGFN 1312

Query: 353  IGISRLIVALKS------------LESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQM 399
            +   RL  A+               E       +     +     DS     K     Q 
Sbjct: 1313 LSWDRLSSAMLEYIKGSSKSHLKHHEVEPAAFWKTRRCDVLVASFDSKILRKKGIEVVQD 1372

Query: 400  LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            L    I AE+ + +S +    L      N    +I     + RG  +++ L   +E    
Sbjct: 1373 LWANDISAELAVDAS-SLEELLTKYKDHNHSWIVIVKQDSQERG-FKVRCLVPKEEFDLR 1430

Query: 460  IKNNESWREARVAQITIPISELVSTVKKILQENKE 494
                  W    +          V   +  L    +
Sbjct: 1431 SSELIPWLRNEIRARN-QREGAVDFRQSRLPSQPD 1464


>gi|302505695|ref|XP_003014554.1| hypothetical protein ARB_07116 [Arthroderma benhamiae CBS 112371]
 gi|291178375|gb|EFE34165.1| hypothetical protein ARB_07116 [Arthroderma benhamiae CBS 112371]
          Length = 1567

 Score = 89.9 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 69/473 (14%), Positives = 146/473 (30%), Gaps = 57/473 (12%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ +   + D +  ++  +G   +ET          +          G   L D  G  +
Sbjct: 969  ELLLHGVVKDKLTALFRKHGA--VETC---RQSLFPRSS----HYGPGAVRLLDPGGNLV 1019

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
             L YDLT P AR + +   +I             V R E  G       I          
Sbjct: 1020 QLPYDLTLPNARALPKQDLSIEKAFSFGTVYRESVHRGEPRGHKEVDFDIVSYNTLDLPL 1079

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
             E    ++   + D    +  +       +N+  +L+ ++    +  + +   + ++ + 
Sbjct: 1080 KEAEVIKVLDEIIDEFPPL--RSTQMCFHLNHSDLLEAVVAFCRITPEQRPIVKEVISKL 1137

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHELYEL 258
               + ++ +Q ++  L           +    + S  ID +  F   D  +K++  L+ +
Sbjct: 1138 --NIGQYTMQKIRSELR----------SPSIGVPSTSIDDLSRFDFRDTPQKALSRLHAI 1185

Query: 259  VKGTIAGEK---GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
            + GT   ++    FN L ++   + K            + +    Y    +++ +     
Sbjct: 1186 MDGTEYADRLSPIFNRLNIVVSYLEKFKVKRKVYISPLSSLNDKFYNGSVLFQCVFDKKR 1245

Query: 316  MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN----- 370
             +             GGRYD L+  F+         S  +   +   K   S TN     
Sbjct: 1246 RD---------VFAAGGRYDSLIQEFQPILRSNRPRSHAVGFNLGLDKLNGSMTNYLKGS 1296

Query: 371  ------------NIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                        N        +     D     +        L    I AE+   ++ + 
Sbjct: 1297 NKSFLKPDAEVGNSWRKNKCDVLVASFDPSVLRTVGVGIVSTLWAHDISAELAADTTPSL 1356

Query: 418  GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             + L      N    +I       RG L++K + + ++      +   W    
Sbjct: 1357 EDLLTRYVDDNYSWVVIVKQDSIERG-LRVKSVQRKEDFDVRSSDLVPWLRNE 1408


>gi|167587061|ref|ZP_02379449.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           ubonensis Bu]
          Length = 382

 Score = 89.9 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 65/332 (19%), Positives = 115/332 (34%), Gaps = 41/332 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL     ++ R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGNDLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGLSR--IRLDLCHAGVLAALL---------- 170

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D       + +   L         + T      +      +  L  D  
Sbjct: 171 ---------ARDAQAAERGEALYDALSGKDVPLLNELTDDLGADTRAALRALPHLYGDAS 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E    +       +  ++L  ++   +        + I    +RG  Y++G +  A
Sbjct: 222 -VLDEARARLPALPEITRALDDLAQLAARAK-----GVEVAIDLADLRGYAYHSGAMLTA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            +            V  ++  GGRYD +   +
Sbjct: 276 YI----------DGVPNAIARGGRYDHVGQAY 297


>gi|238027081|ref|YP_002911312.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           glumae BGR1]
 gi|237876275|gb|ACR28608.1| TRNA synthetase, class II (G, H, P and S) [Burkholderia glumae
           BGR1]
          Length = 382

 Score = 89.9 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 64/332 (19%), Positives = 115/332 (34%), Gaps = 41/332 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGSDLRLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F+L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FNLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGNVLHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+      + + +  +L  +           
Sbjct: 123 QIGAELYGHAGLEADLEVQQLMLDALRLAGL--GKVRLDLCHAAVLGALFR--------- 171

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D +     + +   L         + T      +      +  L  D  
Sbjct: 172 ----------RDAVAAARGEALYDALASKDVPLLNELTDDLGPDTRAALRALPHLYGDA- 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + E   ++       +  ++L  ++   R        + I    +RG  Y++G ++ A
Sbjct: 221 AVLGEARRVLPALPEIARALDDLAQLAAHAR-----GADVSIDLADLRGYAYHSGAMFSA 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            +            V  +V  GGRYD +   +
Sbjct: 276 YV----------DGVPNAVANGGRYDHVGQAY 297


>gi|87302716|ref|ZP_01085527.1| Histidine--tRNA ligase [Synechococcus sp. WH 5701]
 gi|87282599|gb|EAQ74557.1| Histidine--tRNA ligase [Synechococcus sp. WH 5701]
          Length = 229

 Score = 89.9 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 5/110 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++    ++   +  +Y  +G+  +  P++E  D+L          
Sbjct: 1   MALQPAAGARDLHPRQVDRNRQLCQRLAAVYRLWGYQEVAPPMVERLDTLEAGGG---IA 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
            + V  L     + + LR +LTA +AR           P R +  G +FR
Sbjct: 58  EREVARLT--AEEPLGLRPELTASIARAACTRLADRPRPLRLWAEGSIFR 105


>gi|331701078|ref|YP_004398037.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           buchneri NRRL B-30929]
 gi|329128421|gb|AEB72974.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           buchneri NRRL B-30929]
          Length = 381

 Score = 89.9 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 13/190 (6%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  K      LP G  D    E  ++  I + +   +   GF  + TP+LEYSD      
Sbjct: 1   MKNKN-----LPIGTRDEFGTEAEVKETIQNKLFQGFWRRGFRKLTTPVLEYSDVFQPLN 55

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +  RP    + L D+ G+ + LR DLT P+AR ++     +    + Y  G VFR +K 
Sbjct: 56  AENYRP----YQLLDEQGEPLVLRPDLTLPVARVMSTTGIELP--VKWYYGGDVFRVKKQ 109

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G + Q  Q  ++ VG     AD E   +         +   +  I +++ K +D +++
Sbjct: 110 LSGSYNQLTQAGIEIVGYKGLKADWECLEVALAGCRD--MAIENVTIELSHAKFVDVLID 167

Query: 181 KIGLHGDDKL 190
           ++ L    K 
Sbjct: 168 RLDLPEPTKA 177


>gi|241764505|ref|ZP_04762526.1| histidyl-tRNA synthetase 2 [Acidovorax delafieldii 2AN]
 gi|241366089|gb|EER60686.1| histidyl-tRNA synthetase 2 [Acidovorax delafieldii 2AN]
          Length = 387

 Score = 89.9 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 4/147 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +    YG++ +  PLLE+ +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLLDTARCYGYELVMPPLLEHLESLLTGTGEA--LGLQT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T+ +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQLSGRSLGLRADTTSQVARIDA-HLLNRKGVTRLCYCGPVVHTRPDRPHATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLE 156
           Q   +  G     AD E  ++  D L 
Sbjct: 123 QFGAEIYGHGGLEADLEALLLALDCLR 149


>gi|163759522|ref|ZP_02166607.1| prolyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283119|gb|EDQ33405.1| prolyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 447

 Score = 89.9 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/470 (12%), Positives = 126/470 (26%), Gaps = 65/470 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++ +   G         R+ +++ + +R      G   I  P ++ +D L +  
Sbjct: 26  MARAGMIKQQS-AGIYSWLPLGKRVLDKVCNIVREEQNRAGAIEILMPTIQPAD-LWRES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D   + +  + D + + +       ++   + R   +++  +       +       
Sbjct: 84  GRYDDYGQEMLRINDRNDREMLFGPTNEEMVTDIFRSYVKSYKDLPLNLYHIQWKFRDER 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      F        D    +++ A   M +    T E  G+K            
Sbjct: 144 RPRFGVMRGREFLMKDAYSFDLDYEASKAAYNRMFVSYLRTFERCGLKSIPMRADT---G 200

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            + G L    +   +    ++   R  D                   D + D        
Sbjct: 201 PIGGSLSHEFIVLAETGESQVFCHRDFDGFAVPP------------VDMNYDDAAAVAAV 248

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            EQ                    E++       + ++ L                   + 
Sbjct: 249 VEQ-----------WTTPFAATDEIMDKEEWAREAWDGLGE----------------DAR 281

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
              RG+E      +      P+    Q P            DG        +       +
Sbjct: 282 VSARGIEVGHIFHFGTKYSEPMNAFVQGP------------DGKQHYVSMGSYGIGPSRL 329

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
             + +  +                V +  M   D+   +  +     L  AGI   ++  
Sbjct: 330 LGAIIEASHDENGIIWPKGVAPFDVGLINMKPGDAACDAACERIETALENAGIE-LLYDD 388

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           + +  G +   AD    P+ +I G    + G ++IK  A G+  +  I  
Sbjct: 389 TDERAGAKFAKADLIGLPIQVIAGPRAVADGNVEIKVRATGERETLSIDE 438


>gi|307729259|ref|YP_003906483.1| histidyl-tRNA synthetase 2 [Burkholderia sp. CCGE1003]
 gi|307583794|gb|ADN57192.1| histidyl-tRNA synthetase 2 [Burkholderia sp. CCGE1003]
          Length = 383

 Score = 89.5 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 82/396 (20%), Positives = 138/396 (34%), Gaps = 56/396 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYIESLLTGSAQDLGLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGNVAHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+      + + +  +L  ++E      D  
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGL--GKVRLDLCHAGVLAALIEAEPAAAD-- 178

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +     D L    +  +  L               ANLT+   D + +  S+  +
Sbjct: 179 -----LGQSLYDALAGKDVPRLVDL--------------TANLTAVTRDALRALPSLYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S + E    +    A  +  ++L  ++  V      S  + I    +RG  Y++G ++ 
Sbjct: 220 ASVLEEARARLPNAPAIARALDDLAFLASQVE-----SAEVMIDLADLRGYAYHSGVMFS 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A +            V  +V  GGRYD +   +                   +L   E +
Sbjct: 275 AYV----------DGVPNAVARGGRYDHVGQFYGRARAAT----------GFSLDLREVA 314

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
             +  E     I       D+L         LR AG
Sbjct: 315 RISPVEARSSAILAPWQHDDALRVS---VAALRDAG 347


>gi|226356225|ref|YP_002785965.1| ATP phosphoribosyltransferase regulatory subunit [Deinococcus
           deserti VCD115]
 gi|226318215|gb|ACO46211.1| putative ATP phosphoribosyltransferase regulatory subunit; putative
           Histidine--tRNA ligase [Deinococcus deserti VCD115]
          Length = 400

 Score = 89.5 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 83/422 (19%), Positives = 139/422 (32%), Gaps = 72/422 (17%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G  D    E   R  +   +  ++  +G+  +E P LE++D            ++  
Sbjct: 26  IPEGTRDVLPPEWAQREHLRARLSALFRGWGYRGVELPSLEFADP-------AHPQDRRA 78

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP-GRFRQFI 129
           F L D  GQ ++LR + T  + R V   F    FP R    G ++   +    GR R+F 
Sbjct: 79  FKLIDSGGQVLALRSEFTTAIGRLVRLRFPEGPFPLRLQYSGRLWLRTQTSELGRLREFN 138

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  V+ VG     +DAE+  + A  L  VG+      + +     +D +LE  G+  D +
Sbjct: 139 QVGVELVGVDTPQSDAELLHLAAAALAEVGVSA---QLELGFPGFVDAVLEDAGVSEDVR 195

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    AID+     L+                    A L  E    +     +   
Sbjct: 196 DALH----DAIDRKSGADLE---------------LMATRAALAPEVTRTLHDLTDLYGG 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +    +      +     L  ++       +    +     + R   YYTG  + A
Sbjct: 237 PEVLDDAARMARGERAQAAVAHLRAVAA------HYGGPLLFDLGVSRRYGYYTGVTFRA 290

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             V GGGRY           +P  GF+IG       L+ L    
Sbjct: 291 YADGLNQ----------PVLGGGRYA------LDGGLPGAGFAIG-------LERLTGVL 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ-LKYADRRN 428
             +    P ++  +D +    +         R AG  AE+          Q L +   R 
Sbjct: 328 APLLPPEPEVVLALDLEGALAA---------RAAGFTAELAWTDD---QAQLLAFCAARG 375

Query: 429 CP 430
             
Sbjct: 376 IR 377


>gi|324991610|gb|EGC23543.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK353]
          Length = 329

 Score = 89.5 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 130/362 (35%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I  +I +   + GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERAISDFLMDQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+ +    +     
Sbjct: 166 SLALDSQEEAQ-------------------LLDYIRKKNRTGLFEFTQTSPSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V          +++  + + +        +  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIV-DNERILTALDDIEQVLQSLS---GLLEQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GG YD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGCYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|199599238|ref|ZP_03212639.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus rhamnosus HN001]
 gi|258508440|ref|YP_003171191.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           rhamnosus GG]
 gi|199589850|gb|EDY97955.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus rhamnosus HN001]
 gi|257148367|emb|CAR87340.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           rhamnosus GG]
 gi|259649753|dbj|BAI41915.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           rhamnosus GG]
          Length = 382

 Score = 89.5 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 62/353 (17%), Positives = 128/353 (36%), Gaps = 40/353 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D        +  ++  + + +   G++ ++TPLLEY D         ++P    
Sbjct: 6   LPVGTRDEFGPRAIRKENLIQMMSHRFIASGYERVKTPLLEYRDVFQPLTVRGEQP---- 61

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + + DD G+ + +R DLT PLAR ++    +I  P + + +G VFR  K   G + Q  Q
Sbjct: 62  YQMLDDAGEAVVMRPDLTLPLARLLST--TSIQPPVQWWYVGDVFRVRKSLSGTYNQMTQ 119

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G ++  A+           E +G+   D  + +++ + +  +++ + L      
Sbjct: 120 AGIELIGYASIKAEWACLSEATRICEDLGLT--DLTLELSDVQFVSQVMQALPLDPATAS 177

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE- 249
             +    +      +  +  ++                 A     Q+  ++    +    
Sbjct: 178 ALQAAFFKKNLSTYQQLIAPLRAEPLYPFLQQWPWLFGEAATIFTQLAQLLPPTLLHSRL 237

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K + +    +                     +  +    I +  T      YYTG  + A
Sbjct: 238 KPLQQTVAFL---------------------QHQFPQVTITVDLTSQPPQSYYTGLFFHA 276

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
                             +  GGRYD L++ F+   +PA G +  +  L   L
Sbjct: 277 YASDSRQ----------YLFSGGRYDQLLASFQQDLLPAVGLAFDVDALTDIL 319


>gi|296418131|ref|XP_002838695.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634656|emb|CAZ82886.1| unnamed protein product [Tuber melanosporum]
          Length = 1628

 Score = 89.5 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 69/480 (14%), Positives = 159/480 (33%), Gaps = 50/480 (10%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            +I ++  + + +  I+ ++G      PLL         LP     N+ V  L D  G  +
Sbjct: 1023 DIILQGTVRERLIEIFRHHGAVETTRPLL---------LPRSKLYNRDVAQLLDQSGTVV 1073

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
             L YDLT P AR +A                     +    G+ R   + D D +   + 
Sbjct: 1074 QLPYDLTLPHARSLARQETLSPKTFTFG----TVYRDNPAGGQPRSHGEVDFDIISYDSH 1129

Query: 142  T---ADAEMCMMMADTLEAVGI-KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                 +AE+  ++ + L+A    ++      IN+  +LD I+E   ++   +   +  + 
Sbjct: 1130 DLALKEAEVIKVIDEILDAFPSLRKAQMCFHINHADLLDIIMEFCRINPAHQPVAKETLS 1189

Query: 198  RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHELY 256
            +      ++    ++  L             G  +    +D +  F   D  EK++ +L 
Sbjct: 1190 KL--NTGQWLWPRIRDEL----------IISGLGILPTSLDDLAKFDWRDEQEKALSKLN 1237

Query: 257  ELVKGTIAGEK---GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
             L++G+   +K    F  +  +   +++ G   +             Y  G V++ ++  
Sbjct: 1238 LLLRGSNLADKAKTAFAHIRAVIGYLKQFGITRDIYVSPLGTWNDKFYRGGVVFQCVVDS 1297

Query: 314  PVMN-----------EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               +            +        +       G    ++        F    ++     
Sbjct: 1298 RKRDVFAAGGRYDSLVQSHRPAVRGIAEETHAVGFNLGWEKLFTSVARFQKNYAKPQHKR 1357

Query: 363  KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
               E+    +     VL+ +    +   ++     + L   GI AE+  G + +    + 
Sbjct: 1358 GEDENLRPWVTRRYDVLVASFCKTA-LRTQGIAILRELWANGISAELA-GDASSPEQLIN 1415

Query: 423  YADRRNCPLAIIQ----GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
                      II     G+       L++K L + +++   + +   + +  + +     
Sbjct: 1416 SYKGDGISWIIIIKQGFGSSLDGDRCLKVKSLLRKEDVELRVADMVPYLKNEIIEREKKE 1475


>gi|289548806|ref|YP_003473794.1| prolyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182423|gb|ADC89667.1| prolyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 570

 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 63/547 (11%), Positives = 143/547 (26%), Gaps = 78/547 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     ++  G        +R+  +I   +R   +  G   +   +L  ++ L +     
Sbjct: 28  KGGFIKQIASGVYQYTPPALRVLRKIESIVRKEMDRTGAQEVLLTVLNPAE-LWRETGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY----DLTAPLARYVAENFDTIV----FPCRTYRIGPVF 115
           D   + +F+L+D  G+   L      ++T  L R    ++  +          +R     
Sbjct: 87  DLYGRELFTLKDRHGRDYCLGPTHEEEVT-DLFRSYVTSYRQLPLILYQIQVKFRDEKRP 145

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R        F        D    SA  +   M        + + +K       +      
Sbjct: 146 RFGLIRAREFIMKDAYSFDLDEFSAIMSYEAMKFAYDRIFKKMRLKTLMVEASVGAIGGK 205

Query: 176 DGI-LEKIGLHGDDKLNERLIVLRA------------IDKLDKFGLQGVK-------LLL 215
                  +  +G+ ++        A             +   +  LQ V          L
Sbjct: 206 SSHEFVVLTDYGEARVAYCENCSYAANAEIVPLGKGKEEDEPEMPLQKVATPGVSTIEEL 265

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVI 275
                       KG     E+ + ++ F+  D +   ++L  ++           E+  I
Sbjct: 266 SRFLKVPPRKILKGLLYVVEEKEPLLVFIRGDRQVDENKLEAILGTDNFRLAKDEEIKEI 325

Query: 276 SEL------------------------VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                                      V+      N   +          +       + 
Sbjct: 326 LGTVRGFVGPLSLKNNVRVLWDNSLYGVKNMVVAINEPDVHYVNANPGRDFHYGDMVDVC 385

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----------------GFSIGI 355
                +   K      V  G     +       + P                   + IGI
Sbjct: 386 QVEEGDPCPKCGAPLKVNRGLEVGHIFLLGTRYSEPMKAFVKDSEGKDVPVVMGCYGIGI 445

Query: 356 SRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           SR + A+               +      ++     D +  +  +      +  G+   +
Sbjct: 446 SRCMSAIVEQHHDEKGIKWPTPVAPFELDIVCVNISDEEQRAVAEKLYTTAQEMGVEV-L 504

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    ++ G++   AD    P  I+ G      G ++++    G+     I+      + 
Sbjct: 505 YDDRDESPGSKFADADLCGFPYRIVVGKK-VKEGKVEVQSRHTGERWDAPIEEAVGQVKE 563

Query: 470 RVAQITI 476
            + Q  +
Sbjct: 564 LIHQEKL 570


>gi|332188564|ref|ZP_08390283.1| tRNA synthetase class II core domain family protein [Sphingomonas
           sp. S17]
 gi|332011408|gb|EGI53494.1| tRNA synthetase class II core domain family protein [Sphingomonas
           sp. S17]
          Length = 368

 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 9/159 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG---KFLPDE 63
           + A LP G+ D           +   +      +G++  + P +E++++LG   K     
Sbjct: 1   MTALLPEGYHDRLPPYADAAASVEARVLEAARLHGYERADPPSIEFAEALGSRLKAGGLH 60

Query: 64  DRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           D          D    + +++R DLTA +AR  A        P R    G V R      
Sbjct: 61  DAV-----RFVDPVSQRTLAIRPDLTAQVARIAATRMGHHPRPVRLSYAGTVVRLRGSEL 115

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
              R++ Q   + +G  +  A  E+  +  + L A G  
Sbjct: 116 APAREWRQIGAELIGLDSTAAATEVVRVAVEALIAAGTT 154


>gi|312278560|gb|ADQ63217.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           thermophilus ND03]
          Length = 326

 Score = 89.1 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 74/361 (20%), Positives = 134/361 (37%), Gaps = 48/361 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T     L  G  D   K  R   +I   I ++    GF  IETP LE+ +      
Sbjct: 1   MKKTT-----LALGMHDKLFKRARTMYQIEHCICDLLMTKGFLRIETPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D  + G ++  D +G  ISLR D+T+ + R +A     +  P +    G VF   + 
Sbjct: 52  --SDVVDNGNYNFFDKNGDLISLRPDITSQIGRVIAS--TQVHTPIKFSYSGKVFNYNEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  V+ +G     A  E  +   + L+  G++  +Y    ++ ++L  I E
Sbjct: 108 MRGLSNEHTQAGVEIIGFPVHQALEEAVISAKEALDVAGVR--NYKFEFSHAQLLQLIFE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++ L    +                     +   + +       +FTK      +++   
Sbjct: 166 ELNLPAVKEA-------------------ELATYIRDKSITGLKEFTKENPSQYDKVLEQ 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +    + E  + +    +     + L V++  +     N     +    +  + 
Sbjct: 207 LPFLFGETTAVLTEARQ-LTDNESFLTALDSLEVLTSRLAD---NLPETTLDLAQLPAVP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++               V  +   GGRYD L  RF    + A G++I I  +  
Sbjct: 263 YYTGIMFKVF----------GDKVPDAFVSGGRYDKLFERFGATELTAVGWAIDIDSVYQ 312

Query: 361 A 361
           A
Sbjct: 313 A 313


>gi|255030604|ref|ZP_05302555.1| histidyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 91

 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 1/92 (1%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           M    ++  K       LR  GI AE      + F  QLK A+R+N    II G  E   
Sbjct: 1   MTAQPEAELKGVTLVNKLRQNGISAEKDY-LKRKFKAQLKDANRKNAVYTIILGEEELQT 59

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           G  Q+K++  G++ +               + 
Sbjct: 60  GNYQLKNMETGEQEAVSETTILEKLSNTKGEK 91


>gi|157150056|ref|YP_001450690.1| tRNA synthetase class II core domain-containing protein
           [Streptococcus gordonii str. Challis substr. CH1]
 gi|189028237|sp|A8AY30|HISZ_STRGC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|157074850|gb|ABV09533.1| tRNA synthetase class II core domain (G, H, P, S and T)
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 329

 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 128/362 (35%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+      +     
Sbjct: 166 SLVLDSQEEAQ-------------------LLDYIRKKNRTGIFEFTQSRPSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V          +++  +   +       ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIV-DNERILTALDDVEQVLRSLSD---LLDQTTMDLGQVATMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGATELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|254418115|ref|ZP_05031839.1| prolyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184292|gb|EDX79268.1| prolyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 438

 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/465 (12%), Positives = 136/465 (29%), Gaps = 67/465 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  +I   +R   +  G   +  P L+ +D L +     D  
Sbjct: 31  MIKQEAAGIYAWLPLGLRVLRKIEQIVREEQQRAGAVELLMPTLQLAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  + D   + +       ++   + R   +++ ++      + I   FR+E+    
Sbjct: 90  GPEMLRITDRHERELLYGPTNEEMITDIFRAYVKSYKSLP--LNLFHIQWKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S      +         +  +             R  L  +     
Sbjct: 148 GVMRGREFLMKDAYSFDVDEASARKAYNRMFVAYLNTFA---------RMGLKAV----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI---DIM 240
                                      ++   G    D S +F   A      +     +
Sbjct: 194 --------------------------PMRADTGPIGGDLSHEFIVLAETGESAVFCDKAL 227

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           V   +   +    +L  +V    A      E+        ++ + +   +      RG+E
Sbjct: 228 VEMPAPGADVDWDDLQSIVDQRTALYAATEEMH------DEARFEAETAEGDRLSARGIE 281

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
                 +      P+  +   P    +    G Y   VSR  G  + A+    GI     
Sbjct: 282 VGHIFYFGEKYSAPMKAKVAGPDGQDAEVHMGSYGVGVSRLLGAIIEASHDEGGI----- 336

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                    + +     V+I    +D+   +  +     L   G    ++  + +  G +
Sbjct: 337 ------IWPDAVAPFDVVVINLRANDAAVSAACEDAVAQLEKLGKDV-LYDDTDERPGGK 389

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              AD    P  +  G    + G++++K  A G+++S  +     
Sbjct: 390 FATADLIGVPWQLTIGPKGLADGVVELKRRATGEKVSVPLAEAIE 434


>gi|325696012|gb|EGD37903.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK160]
          Length = 329

 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 129/362 (35%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+      +     
Sbjct: 166 SLVLDSQEEAQ-------------------LLDYIRKKNRTGLFEFTQTRPSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V          +++  + + +       ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIV-NNERILTALDDVEQVLQSLS---GLLDQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|229552241|ref|ZP_04440966.1| histidine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539653|ref|YP_003174152.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           rhamnosus Lc 705]
 gi|229314377|gb|EEN80350.1| histidine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151329|emb|CAR90301.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           rhamnosus Lc 705]
          Length = 382

 Score = 89.1 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 62/353 (17%), Positives = 128/353 (36%), Gaps = 40/353 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D        +  ++  + + +   G++ ++TPLLEY D         ++P    
Sbjct: 6   LPVGTRDEFGPRAIRKENLIQMMSHRFIASGYERVKTPLLEYRDVFQPLTVRGEQP---- 61

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + + DD G+ + +R DLT PLAR ++    +I  P + + +G VFR  K   G + Q  Q
Sbjct: 62  YQMLDDAGEAVVMRPDLTLPLARLLST--TSIQPPVQWWYVGDVFRVRKSLSGTYNQMTQ 119

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G ++  A+           E +G+   D  + +++ + +  +++ + L      
Sbjct: 120 AGIELIGYASIKAEWACLSEATRICEDLGLT--DLTLELSDAQFVSQVMQALPLDPATAS 177

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE- 249
             +    +      +  +  ++                 A     Q+  ++    +    
Sbjct: 178 ALQAAFFKKNLSTYQQLIAPLRAEPLYPFLQQWPWLFGEAATIFTQLAQLLPPTLLHSRL 237

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K + +    +                     +  +    I +  T      YYTG  + A
Sbjct: 238 KPLQQTVAFL---------------------QHQFPQVTITVDLTSQPPQSYYTGLFFHA 276

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
                             +  GGRYD L++ F+   +PA G +  +  L   L
Sbjct: 277 YASDSRQ----------YLFSGGRYDQLLASFQQDLLPAVGLAFDVDALTDIL 319


>gi|298291828|ref|YP_003693767.1| prolyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928339|gb|ADH89148.1| prolyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 440

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 54/452 (11%), Positives = 124/452 (27%), Gaps = 61/452 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ ++I + +R      G   I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYAWLPLGKRVLDKICNVVREEQNRSGAIEILMPTIQSAD-LWRESGRYDDYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D   + +       ++   + R   +++  +      Y I   FR+E        +  +
Sbjct: 97  KDRHERDMLFGPTNEEMLTEIVRAYVKSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S     ++ +       +  +             R  L  I            
Sbjct: 155 FLMKDAYSVDLDFESAVVAYNRMFVAYLRTFE---------RLGLKAI------------ 193

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               +    G    ++S +F   A+    Q+     +L +D   
Sbjct: 194 -------------------PMVADTGPIGGNHSHEFIILASTGESQVFCHSDYLGMDTPG 234

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           S    ++           +  L   +E            +      RG+E      +   
Sbjct: 235 S-DVDFQDPAALQTIVNRWTSLYAATEEKHDEAAFEAIPEGQRLSARGIEVGHIFYFGTK 293

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              P+      P            DG+       +       +  + +  +         
Sbjct: 294 YSEPMNATVAGP------------DGVERPVHMGSYGIGPSRLAAAIIEASHDENGIIWP 341

Query: 371 NIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                  V +  +     +     +     L +  I   ++  + +  G++   AD    
Sbjct: 342 EAIAPFRVGLLNLKVGDAATDAACEAIYAELASRNIDV-LYDDTDERPGSKFATADLIGL 400

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           P  II G    + GM+++K  A G   +  + 
Sbjct: 401 PWQIIVGPKGLANGMVELKRRADGTRETLPVA 432


>gi|83312290|ref|YP_422554.1| ATP phosphoribosyltransferase [Magnetospirillum magneticum AMB-1]
 gi|82947131|dbj|BAE51995.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
           [Magnetospirillum magneticum AMB-1]
          Length = 363

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 3/142 (2%)

Query: 19  PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD-D 77
              +      ++ S+ +++  +G+D ++ PL+E+ +SL          +   F + D   
Sbjct: 2   LPPDAEFEASVVHSLMSMFARHGYDRVKPPLIEFEESLLDGAGGG--TSSQTFRVMDPMS 59

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + + LR D+T  +AR  A    +   P R    G V R +       RQF Q  ++ +G
Sbjct: 60  QKMMGLRADMTPQVARIAATRLGSQPRPLRLSYAGQVLRVKGTQLRPERQFGQAGIELIG 119

Query: 138 SSAETADAEMCMMMADTLEAVG 159
           S    ADAE+ +M A+ L+ +G
Sbjct: 120 SDDAGADAEVLVMTAEALDDLG 141


>gi|293604551|ref|ZP_06686956.1| ATP phosphoribosyltransferase regulatory subunit [Achromobacter
           piechaudii ATCC 43553]
 gi|292817132|gb|EFF76208.1| ATP phosphoribosyltransferase regulatory subunit [Achromobacter
           piechaudii ATCC 43553]
          Length = 385

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 70/406 (17%), Positives = 134/406 (33%), Gaps = 56/406 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + ++Y  YGF+ +  PL+EY DSL      +       
Sbjct: 6   LPESLADVLPAEARRIEELRRELLDLYRTYGFELVAPPLVEYIDSLLSGTGSDLDLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + +R D+T  + R  A +        R    G V           R+ +
Sbjct: 64  CKLVDQLTGRTLGVRADMTPQVTRIDA-HLLNRAGVTRLCYCGNVLHARPADLLSSRELL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  ++ +T+   G++  +  + + +  ++  I+E         
Sbjct: 123 QIGAEIYGHAGFEADLEIIQLVLETVAIAGVR--NPRLDLCHPGVVRAIVES-------- 172

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA-NLTSEQIDIMVSFLSID- 247
                      D         V  LL +       +  + A  + +E +  +    ++  
Sbjct: 173 -----------DPAAVALADEVIRLLRDKDVPGLSELAERAPGIRAETLKALKLLPNLYG 221

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + +      +          + L  + +        +    +    V G  Y++G  +
Sbjct: 222 GPEVLKNARRDLPLLPGVAAALDALQALVD-----AMPNVAFGVDLADVGGYGYHSGVKF 276

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                              ++  GGRYD +   F  +  PATGFS+ + +L   L   E 
Sbjct: 277 ALYAE----------GWHDALVSGGRYDDVSRAFG-RARPATGFSLDLRKLAAGLPPAER 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLG 412
           +       G                     + LR +G I  ++  G
Sbjct: 326 ARAVRAPWGQA------------PALTEAVRRLRRSGEIVVQVLPG 359


>gi|198414043|ref|XP_002125005.1| PREDICTED: similar to eukaryotic translation initiation factor 2
            alpha kinase 4, partial [Ciona intestinalis]
          Length = 1183

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 75/503 (14%), Positives = 154/503 (30%), Gaps = 78/503 (15%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
             + +  D I ++   +G   +  PLL     L K   + D     V  L    G  +SL 
Sbjct: 570  AQQQTFDIISSLLRCHGAVRVNPPLL-----LPKCGSENDANEAAV--LIGVGGNVVSLP 622

Query: 85   YDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
            Y L  PLAR++     T +      ++    +  +  P    +     +           
Sbjct: 623  YILRIPLARFILCKGITNIKTYAIEKVFRARKYARSRPKELWECSFDIISPSVGGLAPDA 682

Query: 145  AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
              + ++     +   +    Y + IN+   L+ IL   GL  +    E L  L +   L 
Sbjct: 683  EVISVVSEIISQFPSLSSQKYEVRINHLLALESILTYCGL-DESHHTEALNALASCSGLS 741

Query: 205  KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE-------LYE 257
            K                   +      L ++Q+  +++F+ +    S  +         +
Sbjct: 742  KT---------------QLHNCINSLPLNAQQVASLLTFIQVQGPLSRVQTSLRSITRNK 786

Query: 258  LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                +    +  +EL  + + +         +       +   +Y G +++         
Sbjct: 787  HSPASSRARQALHELEALRKNLDSLNLTLPVVFDLGYSHKHHNHYNGIIFKV----SAEI 842

Query: 318  EKQKPVVFGSVGGGGRYDGLVSRFKGQNV------------PATGFSIGISRLI-VALKS 364
            +K+K      +  GGRYD L++     N+             A G SI + +++   ++ 
Sbjct: 843  QKKKRTAIDVLAIGGRYDKLLTTMSVFNMYDRDGEQKLTPKHAVGVSIAVEKIVGSVMEE 902

Query: 365  LESSTNNIKE-------------MGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMF 410
                ++                    V +         L  +     + L  A I AE  
Sbjct: 903  NNLPSSTSMSGSNDPTVTSQLSHHAAVDVLVCSVGRTLLLHERLRVVRSLWEASIAAETV 962

Query: 411  LGSSK--NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                   +     + A  R     +     E+  G   ++ L                  
Sbjct: 963  YDRGAMESMQEVQEKAQERGIRHLVFL--SEKESGSPLVRSLT-------------HDPL 1007

Query: 469  ARVAQITIPISELVSTVKKILQE 491
             R  +  +P+ +LV  + K L+E
Sbjct: 1008 LRSTERRVPLDQLVDYLLKRLKE 1030


>gi|327461182|gb|EGF07515.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK1057]
          Length = 329

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 129/362 (35%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPARKAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+      +     
Sbjct: 166 SLALDSQEEAQ-------------------LLDYIRKKNRTGLFEFTQTRPSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V          +++  + + +       ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIV-DNERILMALDDIEQVLQSLS---GLLDQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|254252267|ref|ZP_04945585.1| ATP phosphoribosyltransferase [Burkholderia dolosa AUO158]
 gi|124894876|gb|EAY68756.1| ATP phosphoribosyltransferase [Burkholderia dolosa AUO158]
          Length = 394

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 64/332 (19%), Positives = 114/332 (34%), Gaps = 41/332 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + + +YG++ +  PLLEY +SL      + R     
Sbjct: 18  LPENIADVLPSEARKIEELRRRLLDRFRSYGYEMVMPPLLEYLESLLTSGGADLRLR--T 75

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 76  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGHVMHTRPRGLHATREQI 134

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+ R    + + +  +L  +L          
Sbjct: 135 QIGAEIYGHAGLEADLEIQQLMLDALRLAGLSR--VRLDLCHAGVLAALL---------- 182

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D       + +   L         + T      +      +  L  D  
Sbjct: 183 ---------ARDAQAAERGEALYDALSGKDVPLLNELTDDLGADTRAALRALPQLYGDAS 233

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +    +       +  ++L  ++            + I    +RG  Y++G ++ A
Sbjct: 234 -VLDDARARLPVLPEITRALDDLAQLAAQAE-----GAEVAIDLADLRGYAYHSGAMFTA 287

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            +            V  ++  GGRYD +   +
Sbjct: 288 YI----------DGVPNAIARGGRYDHVGQAY 309


>gi|319794348|ref|YP_004155988.1| histidyL-tRNA synthetase 2 [Variovorax paradoxus EPS]
 gi|315596811|gb|ADU37877.1| histidyl-tRNA synthetase 2 [Variovorax paradoxus EPS]
          Length = 386

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 83/408 (20%), Positives = 143/408 (35%), Gaps = 52/408 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +    YG++ +  PLLE+ +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRQLLDTARGYGYELVMPPLLEHLESLLSGTGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQLSGRSMGLRADTTPQVARIDA-HLLNRDGVARLCYCGPVLHTRPDRPHATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E  ++  D L+A G++     + + + +I+  +   + +     
Sbjct: 123 QFGAEIYGHAGLEADTETLLLALDCLDAAGLRDG-VIVDLADARIVRALFAGVPVDAAAL 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 +                        D S       +  +   D + + + +  +
Sbjct: 182 ARVHAAL---------------------AAKDASELHLLTKDFPAASRDGLRALVQLYGD 220

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S + E  + +KGT A      +L  ++  +   G    +I      +RG  YY+G  + 
Sbjct: 221 ASVLDEAAKALKGTPAVSAALADLKQLAAGLN--GSAGRQISFDLADLRGYAYYSGMRFG 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +          P    S+  GGRYD + + F  +N PA GFS+ +  L+  L +    
Sbjct: 279 IYV----------PGAADSLVRGGRYDEVGAVFG-RNRPAVGFSLDVRELVGVLPARPLR 327

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                             SD+    Q   Q LR AG      L    +
Sbjct: 328 AAIRAPW-----------SDAAGLRQAIAQ-LRKAGETVVCVLPGHGS 363


>gi|167948963|ref|ZP_02536037.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 190

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 4/150 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +    E  +  R    + +++ ++G+D +  P +E+ D+L      +       
Sbjct: 12  LPDGIEEVLPPEAALVERRRRQLLDLFASWGYDYVIPPFVEFLDALLTGTGSDLDL--QT 69

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D+T   AR  A +      P R   +G V      G    R  +
Sbjct: 70  FKLTDQLSGRTLGIRADITPQAARMDA-HNIGRDEPTRLCYLGSVLHTRSDGFAGSRSPL 128

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           Q   +  G +   +D E+  +M  TLE  G
Sbjct: 129 QIGAELYGHAGVESDVEILRLMMQTLELTG 158


>gi|292670562|ref|ZP_06603988.1| proline-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647728|gb|EFF65700.1| proline-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 570

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 68/516 (13%), Positives = 133/516 (25%), Gaps = 78/516 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I + IR   E  G   I  P+L+ S+ L +           +  +
Sbjct: 38  GMYTYLPLAWRTIRKIEEIIRAEMEAVGGQEIMMPILQPSE-LWEESGRWGAYGAEMIRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR------IGPVFRNEKHGPGR 124
           +D   +   +     ++   L R    ++  +       +        P F   +     
Sbjct: 97  KDRHDREFCMGPTHEEMITALVRDELRSYKQLPVLLYQIQDKFRDERRPRFGIMRSREFI 156

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            +     D D  G +              T   +  +  +   G       +        
Sbjct: 157 MQDLYSFDEDIEGMNESYRKMYAAYSNIFTRCGLDFRVVEADSGAIGGGRSEEFTVLAPE 216

Query: 185 HGDDKLNERLIVLRAIDKL-----------DKFGLQGVK-------LLLGEGRTDNSGDF 226
                         A D+             +  L+ V         LL E         
Sbjct: 217 GESRIACCDACSYAASDEKAALRPINAPAETELPLEKVATPGTHTIALLAEYLKIPVEKT 276

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
            K     +E   ++++FL  D E +  +L   V G     +  +E  + +        + 
Sbjct: 277 IKAVAYQTEDDSLILAFLRGDHEVNETKLANAVPGA-RDLRMADEAAIRAAGGSPGFMSP 335

Query: 287 NRIKISSTIV-----RGLEYYTGCVYEAILGFPVMNEKQKPVVF------------GSVG 329
             I+  + IV       +        EA   F  +N K+                     
Sbjct: 336 IGIRKGTHIVVDETAMRMHNAVSGANEADFHFLNVNPKRDFGEVTVADIRLVAEGDECPV 395

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES---------------------- 367
            GG +  +    +   + A G     +     L +                         
Sbjct: 396 CGGGHLHISRGIEAGQIFALGTKYSEAMDATFLDAAGKAQPLQMGCYGIGVGRTMAAAIE 455

Query: 368 ---------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                        I     V++       + L+  +   + LR AG+ A +     +  G
Sbjct: 456 QNHDDSGIIWPRAIAPYEVVVVAVNAKVPEQLAYAEEVYEELRAAGVDALLDDRRERA-G 514

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            +    D    P+ I  G      G +++K    G+
Sbjct: 515 VKFNDCDLIGYPVRIAVGPKTIESGSIEVKLRRTGE 550


>gi|239815188|ref|YP_002944098.1| histidyl-tRNA synthetase 2 [Variovorax paradoxus S110]
 gi|259709917|sp|C5CXH6|HISZ_VARPS RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|239801765|gb|ACS18832.1| histidyl-tRNA synthetase 2 [Variovorax paradoxus S110]
          Length = 386

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 85/405 (20%), Positives = 140/405 (34%), Gaps = 53/405 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +    YG++ +  PLLE+ +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRQLLDTARGYGYELVMPPLLEHLESLLSGTGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQLSGRSMGLRADTTPQVARIDA-HLLNREGVARLCYCGPVLHTRPDRPHATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+ ++  D L A G+         + R                 
Sbjct: 123 QFGAEIYGHAGLEADTEVLLLALDCLHASGLSDGVIVDLADAR----------------- 165

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               +  L A   +D   L  V   L           T+     +   D + + + +  +
Sbjct: 166 ---IVRALFAGVPVDAAVLARVHAALVAKDASELHALTRSFP--AASRDGLRALVQLYGD 220

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            S + E  + +KGT A       L  ++  +      + +I      +RG  YY+G  + 
Sbjct: 221 ASVLDEAAKALKGTPAVSAALAGLKQLAASLGA--DPARQISFDLADLRGYAYYSGMRFG 278

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             +          P    ++  GGRYD + + F  +N PA GFS+ +  L+  L +    
Sbjct: 279 IYV----------PGAADALVRGGRYDEVGAVFG-RNRPAVGFSLDVRELVGVLPARPLR 327

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLG 412
                            D+  L +       LR AG I   +  G
Sbjct: 328 AAIRAPWS---------DAAGLREAIA---GLRKAGEIVVCVLPG 360


>gi|262282988|ref|ZP_06060755.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus sp.
           2_1_36FAA]
 gi|262261240|gb|EEY79939.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus sp.
           2_1_36FAA]
          Length = 329

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++            +L  +  +  +  L E     S +F              
Sbjct: 166 SLALDSKEEA-----------QLLDYIRKKNRTGLFEFTRTRSSEFDDFLQE-------- 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V          +++  + + +       ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIV-DNERILTALDDVEQVLQSLS---GLLDQTTMDLGQVASMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|242073566|ref|XP_002446719.1| hypothetical protein SORBIDRAFT_06g021140 [Sorghum bicolor]
 gi|241937902|gb|EES11047.1| hypothetical protein SORBIDRAFT_06g021140 [Sorghum bicolor]
          Length = 559

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 61/454 (13%), Positives = 140/454 (30%), Gaps = 25/454 (5%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKGVFSLQDDDGQWI 81
             + + I++  + +++ +     +   L   + ++ K   +          +    G+ +
Sbjct: 111 SELLDTIIEVAKEVFKRHCAKRFQISPLHTLEWNITKNRGNT-------VKILTQGGEML 163

Query: 82  SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
            L Y+L  P    +A N  +                   G     +F+Q D D +G ++ 
Sbjct: 164 ELCYELRTPFVMSIAVNQTSSFK----RYEISWVHRRAVGYSTPYRFLQGDFDIIGGTSP 219

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
             +AE   +  D        +    I +N+ K+ + I    G+  D + N    +     
Sbjct: 220 IPEAETIKVALDLGTRFYDSK-TLVIRLNHGKLAEAICSWAGVSQDRRQNVAEFLSS--- 275

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM---VSFLSIDLEKSMHELYEL 258
                     +       +   G   +   L+ E ++ +           +  +  L   
Sbjct: 276 --TLVQYWPNEADRKSQWSLIRGQLLQDLRLSEEVVEKLHKADQRFCGSADLVLARLRGT 333

Query: 259 VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
           +    +  K  ++L  +   +R          I   +     YYT   ++          
Sbjct: 334 LFYDKSACKALDDLSALLRCLRVWSVEQPITTIDVLMPPSECYYTDLFFQVYSKEGNHGP 393

Query: 319 --KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG 376
              +K +  G              +K +   A G SI + + +    S +     I+   
Sbjct: 394 SFHEKLLAVGGRYDRLVEQAWDKAYKSKPPGAVGVSIALEKFLPNNPSSDLGLRRIEPSI 453

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            VL+ +       L++       L  A I+A+       +   Q +YA   +        
Sbjct: 454 SVLVCSRGGGG-LLTERMELVAELWKANIKAQFVPQEDPSLQEQYEYASDHDIKCLAFIT 512

Query: 437 TGERSR-GMLQIKDLAKGKELSREIKNNESWREA 469
               S+  +++++ L   KE   E +    +   
Sbjct: 513 ESGLSQTDLVKVRHLDFKKEKDVEREGLIKFLSD 546


>gi|186476168|ref|YP_001857638.1| ATP phosphoribosyltransferase regulatory subunit [Burkholderia
           phymatum STM815]
 gi|229464969|sp|B2JIU1|HISZ_BURP8 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|184192627|gb|ACC70592.1| tRNA synthetase class II (G H P and S) [Burkholderia phymatum
           STM815]
          Length = 383

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 63/333 (18%), Positives = 116/333 (34%), Gaps = 43/333 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + + +  YG++ +  PLLEY +SL      +       
Sbjct: 6   LPENIADVLPSEARKIEELRRRLLDRFRAYGYEMVMPPLLEYLESLLTGGGRDLNLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A +        R    G V      G    R+ I
Sbjct: 64  FKLVDQLSGRTLGLRADITPQVARIDA-HLLNRQGVTRLCYAGNVLHTRPRGLHATREQI 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M D L   G+      + + +  +L  +++      +  
Sbjct: 123 QIGAEIYGHAGLEADLEIQQLMLDALHLAGL--GRVRLDLCHAAVLGALVDSEPAAAELG 180

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                              + +   L         + T  ANL     D + +  ++  +
Sbjct: 181 -------------------ESLYETLAGKDVPLLTELT--ANLPPVTRDALRALPTLYGD 219

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + E    +       +  ++L  +             + I    +RG  Y++G ++ 
Sbjct: 220 ATVLEEARARLPNAPEISRALDDLAFL-----AQQVGGAEVMIDLADLRGYAYHSGVMFS 274

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
           A +            V  +V  GGRYD +   +
Sbjct: 275 AYV----------DGVPNAVARGGRYDKVGQAY 297


>gi|125718258|ref|YP_001035391.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK36]
 gi|166219844|sp|A3CNT6|HISZ_STRSV RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|125498175|gb|ABN44841.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [Streptococcus sanguinis SK36]
 gi|325694963|gb|EGD36868.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK150]
          Length = 329

 Score = 88.4 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 131/362 (36%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDYVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPARKAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++            +L  +  +  +  L E     S +F              
Sbjct: 166 SLALDSQEEA-----------QLLDYIRKKNRTGLFEFTQTRSSEFDDFLQE-------- 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    ELV          +++  + + +       ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARARELV-DNERILTALDDIEQVLQSLS---GLLDQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|324994708|gb|EGC26621.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK678]
 gi|327463231|gb|EGF09552.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK1]
 gi|327489963|gb|EGF21752.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK1058]
          Length = 329

 Score = 88.4 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 128/362 (35%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+      +     
Sbjct: 166 SLALDSQEEAQ-------------------LLDYIRKKNRTGLFEFTQTRPSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V          +++  + + +        +  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARTREIV-DNERILTALDDIEQVLQSLS---GLLEQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|325687708|gb|EGD29729.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK72]
          Length = 329

 Score = 88.4 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 133/362 (36%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++            +L  +  +  +  L E     S +F              
Sbjct: 166 SLALDSQEEA-----------QLLDYIRKKNRTGLFEFTQTRSSEFDDFLQE-------- 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V      E+    L  + ++++      ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIVDN----EQILTALDDVEQVLQSLSGLLDQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|171059539|ref|YP_001791888.1| tRNA synthetase class II (G H P and S) [Leptothrix cholodnii SP-6]
 gi|170776984|gb|ACB35123.1| tRNA synthetase class II (G H P and S) [Leptothrix cholodnii SP-6]
          Length = 387

 Score = 88.0 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 57/150 (38%), Gaps = 4/150 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +     G++ +  PLLEY +SL      E       
Sbjct: 7   LPEHIADVLPHEARRIEELRRIMLDAARTCGYELVMPPLLEYIESLLSGTGHELDLK--T 64

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + +R D T  +AR  A +        R    GPV      G    R+ +
Sbjct: 65  FKLVDQLSGRTLGVRADTTPQVARIDA-HLLNRAGLTRLCYCGPVLHTRPAGLHGSREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           Q   +  G +   AD E+  +  D L   G
Sbjct: 124 QFGAETYGHAGLEADLEVLELAIDCLSLAG 153


>gi|327470758|gb|EGF16214.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK330]
          Length = 329

 Score = 88.0 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 129/362 (35%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVIYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G     A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPVREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+  +   +     
Sbjct: 166 SLALTSQEEAQ-------------------LLDYIRKKNRTGIFEFTQTRSSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V          +++  + + +       ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIV-NNERILTALDDVEQVLQSL---PDLLDQTIMDLGQVATMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|300726084|ref|ZP_07059542.1| histidine--tRNA ligase [Prevotella bryantii B14]
 gi|299776691|gb|EFI73243.1| histidine--tRNA ligase [Prevotella bryantii B14]
          Length = 109

 Score = 88.0 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 1/94 (1%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                +    +  ++      +      +  R AGIRAE+F  ++K    Q+ YA+ ++ 
Sbjct: 3   YPKDSINATQVIFINFGDKETAYSLPVLKACREAGIRAEIFPDAAK-MKKQMNYANAKHI 61

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             A+  G  E   G + +KD+  G +     +  
Sbjct: 62  AYAVFTGDSEIEAGKVTVKDMEMGGQKLVSTEEL 95


>gi|319783000|ref|YP_004142476.1| prolyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168888|gb|ADV12426.1| prolyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 442

 Score = 88.0 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 59/454 (12%), Positives = 128/454 (28%), Gaps = 71/454 (15%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+ +++   IR   +  G   I  P ++ +D L +     D   K +  ++D  
Sbjct: 42  WLPLGKRVLDKVCRIIREEQDRAGALEILMPTIQSAD-LWRESGRYDDYGKEMLRIKDRQ 100

Query: 78  GQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
            + +       ++   + R   +++  +      Y I   FR+E        +  +  + 
Sbjct: 101 DRDMLYGPTNEEVVTEIVRAYVKSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSREFLMK 158

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           +  S     +          +  +             R  L  I                
Sbjct: 159 DAYSFDLDFEGARAAYNRMFVSYL---------RTFTRMGLQAI---------------- 193

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM-- 252
                           ++   G    D S +F   A+    Q+     +L++D+  +   
Sbjct: 194 ---------------PMRADTGPIGGDLSHEFIILADTGESQVYCHRDYLALDVPGANTD 238

Query: 253 ----HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                E+ ++VK         +E+   +   +    +           RG+E      + 
Sbjct: 239 FANDAEIADIVKTWTTPYAATDEMHDEAAWEKIGESDKVS-------ARGIEVGHIFHFG 291

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                P+  +   P        GG Y                 S   + +I         
Sbjct: 292 DKYSKPMGAKVTGPDGKDHFVSGGSY---GIGPSRLVAAIIEASHDDNGII--------W 340

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              +      LI     D++              AG    ++  + +  G +   AD   
Sbjct: 341 PEAVAPFDIGLINMKAGDAECDGVCDELHAAFVAAGKDV-LYDDTDQRPGGKFATADLIG 399

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            P  +I G    + G ++IK+   G+  +  I +
Sbjct: 400 LPWQVIVGPRGVAAGEIEIKNRKTGERETLPIAD 433


>gi|332362061|gb|EGJ39863.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK49]
          Length = 329

 Score = 88.0 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 131/362 (36%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I  +I +   + GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERAISDFLMDQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVELHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+ +    +     
Sbjct: 166 SLALDSQEEAQ-------------------LLDYIRKKNRTGLFEFTQTSPSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V          +++  + + +        +  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIV-DNERILTALDDIEQVLQSLS---GLLEQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|146297032|ref|YP_001180803.1| histidine--tRNA ligase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410608|gb|ABP67612.1| ATP phosphoribosyltransferase regulatory subunit
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 388

 Score = 88.0 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 128/353 (36%), Gaps = 41/353 (11%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
           F D      R+   I     ++++ +G+  IE    E  + L                  
Sbjct: 5   FVDYYPLTSRLLEEIRRKTLSLFKKFGYLLIEPSTFEDYEKLKSLNGQNSI------KFM 58

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
           D DG  ISLR + T  +A   A+N     +P +    G  F+  +   G  R+F Q  V+
Sbjct: 59  DSDGTIISLRNEFTPKVAEIGAKNGGE-AYPIKYCYFGRAFQFLQQEAGDLREFYQAGVE 117

Query: 135 NVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           N  +S       E+ ++  ++L  +G+  +++ I I       GI    G+         
Sbjct: 118 NFHTSDSYYIDLEILILAIESLLQLGV--DNFTIDIGEVNFFKGIAADYGIDD------- 168

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                          + +  L+ +       +F     ++ + ID+  +   +  +K   
Sbjct: 169 ------------ASAEILCKLVDKKDYIGIENFLIKKGISEKVIDVFRNLTRLYGKKDKI 216

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +           +     L  I + + K GY    I I   +V+ L YYTG ++   L  
Sbjct: 217 DDAYKFAKNEISKSAIERLKEIFDKLSKLGY-EKYISIDFGMVKHLNYYTGIIFSGYLPK 275

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
                         V  GGRYD L   F  + + A GF++G+ R++  +   +
Sbjct: 276 LGY----------PVLNGGRYDNLCETFGKR-LYAIGFALGVDRILNWMMKKD 317


>gi|326468593|gb|EGD92602.1| PEK/GCN2 protein kinase [Trichophyton tonsurans CBS 112818]
          Length = 1591

 Score = 88.0 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 67/473 (14%), Positives = 141/473 (29%), Gaps = 57/473 (12%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ +   + D +  ++  +G   +ET          +          G   L D  G  +
Sbjct: 993  ELLLHGVVKDKLTALFRKHGA--VETC---RQSLFPRSS----HYGPGAVRLLDPGGNLV 1043

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
             L YDLT P AR + +   +I             V R E  G       I          
Sbjct: 1044 QLPYDLTLPNARALPKQDLSIEKAFSFGTVYRESVHRGEPRGHKEVDFDIVSYNTLDLPL 1103

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
             E    ++   + D    +  +       +N+  +L+ ++    +  + +   + ++ + 
Sbjct: 1104 KEAEVIKVLDEIIDEFPPL--RSTQMCFHLNHSDLLEAVVAFCRITPEQRPIVKEVISKL 1161

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHELYEL 258
                       ++L             +    ++S  ID +      D  +K++  L+ +
Sbjct: 1162 NIGQYTMQKITIELR------------SPSIGVSSTSIDDLSRIDFRDTPQKALSRLHAI 1209

Query: 259  VKGTIAGEK---GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
            + GT   ++    FN L ++   + K            + +    Y    +++ +     
Sbjct: 1210 MDGTEYADRLSPIFNRLNIVVSYLEKFKVKRKVYISPLSSLNDKFYNGSVLFQCVFDKKR 1269

Query: 316  MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN----- 370
             +             GGRYD L+  F+         S  +   +   K   S TN     
Sbjct: 1270 RD---------VFAAGGRYDSLIQEFQPILRSNRPRSHAVGFNLGLDKLNGSMTNYLKGS 1320

Query: 371  ------------NIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                        N        +     D     +        L    I AE+   ++ + 
Sbjct: 1321 NKSFLKPDAEVGNSWRKIKCDVLVASFDPSVLRTVGVGIVSTLWAHDISAELAADTTPSL 1380

Query: 418  GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             + L      N    +I       RG L++K + + ++      +   W    
Sbjct: 1381 EDLLTRYVDDNYSWVVIVKQDSIERG-LRVKSIQRKEDFDVRSSDLIPWLRNE 1432


>gi|332359406|gb|EGJ37226.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK355]
          Length = 329

 Score = 88.0 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++            +L  +  +  +  L E     S +F              
Sbjct: 166 SLALDSQEEA-----------QLLDYIRKKNRTGLFEFTQTRSSEFDDFLQE-------- 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V          +++  + + +       ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIV-DNERILTALDDVEQVLQSLS---GLLDQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|327474838|gb|EGF20243.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK408]
          Length = 329

 Score = 88.0 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 128/362 (35%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 MRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+      +     
Sbjct: 166 SLALDSQEEAQ-------------------LLDYIRKKNRTGLFEFTQTRPSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V          +++  + + +        +  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARTREIV-DNERILTALDDIEQVLQSLS---GLLEQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|301632635|ref|XP_002945387.1| PREDICTED: ATP phosphoribosyltransferase regulatory subunit-like
           [Xenopus (Silurana) tropicalis]
          Length = 174

 Score = 88.0 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 4/125 (3%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +   +YG++ +  PLLE+ +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLLDTARSYGYELVMPPLLEHLESLLTGSGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  FKLVDQLSGRTLGLRADTTQQVARIDA-HLLNRQAVTRLCYCGPVLHTRPDRPHATREPL 122

Query: 130 QCDVD 134
               D
Sbjct: 123 HEAAD 127


>gi|304391639|ref|ZP_07373581.1| prolyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295868|gb|EFL90226.1| prolyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 451

 Score = 88.0 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 48/465 (10%), Positives = 111/465 (23%), Gaps = 67/465 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K+         G        +++  ++   +R      G   +  P ++ +D L +  
Sbjct: 31  MIKQQS------AGIYSWLPLGLKVLRKVEQIVREEQNRAGAVEVLMPTIQSAD-LWRES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D   K +  +QD   + +       ++   + R   +++  +               
Sbjct: 84  GRYDDYGKEMLRIQDRHERDMLFGPTNEEMITDIFRTYVKSYKDLPL------------- 130

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
                                        +  +     + V  +           K    
Sbjct: 131 ----------------------------NLYHIQWKFRDEVRPRFGVMRGREFLMKDAYS 162

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
                           +  LR  D+L    +  ++   G    D S +F   A+    ++
Sbjct: 163 FDLNADAARAAYYRMFVSYLRTFDRLGVKAI-PMRADTGPIGGDLSHEFLILADTGESEV 221

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
                F             + V            +  I +        ++ +   +    
Sbjct: 222 FCHSDF-----------SKKTVPDAGVDYSDDALIAGIVDDWTSGYARTDEMHDEALWAE 270

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
             E          +G       +     G+   G   DG     +  +       +  + 
Sbjct: 271 VPEDEQLNARGIEVGHIFNFGSKYSEPMGAKVTGP--DGKDVPVEMGSYGIGPSRVVAAL 328

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKN 416
           +            +      V +  +    +            L  AG+         + 
Sbjct: 329 VEAGHDENGIIWPDSVAPFDVGLINLRSGDEVTDAACDDMYAQLSAAGLDVLYDDTDGRA 388

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            G     AD    P  +I G      G +++K  A G+  +  I 
Sbjct: 389 GGK-FALADLIGLPWQLIVGPRGLKTGEVELKARASGERHTVSID 432


>gi|134094500|ref|YP_001099575.1| ATP phosphoribosyltransferase [Herminiimonas arsenicoxydans]
          Length = 360

 Score = 87.6 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 77/424 (18%), Positives = 141/424 (33%), Gaps = 67/424 (15%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD-DGQWISLRYDL 87
           +   I + +  YG++ +  P+LEY +SL      +       F L D   G+ + +R D+
Sbjct: 1   MRRLIIDNFHLYGYELVMPPMLEYLESLLAGAGHDMDLR--TFKLIDQLSGRTLGVRADM 58

Query: 88  TAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM 147
           T  +AR  A +        R    G V +   +G    R+ +Q   +  G     ADAE+
Sbjct: 59  TTQVARIDA-HLLNRASITRLCYCGSVLQTRPNGLHATREPLQIGAEVYGHGGLEADAEI 117

Query: 148 CMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFG 207
             +   +L   G       I + +  +L  I+                   A D   +  
Sbjct: 118 QELALASLALAGFT--QVRIDLCHVGVLRAII-------------------ASDVQAQKD 156

Query: 208 LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKGTIAGE 266
              +   L         + T      ++    +++   +  +   +    E++      +
Sbjct: 157 ENALYTFLRAKDVPALQEMTLTYG--ADTRRALLALPGLYGDVTVIARAREILPKLPGID 214

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
              +EL+ +             + I    + G +Y +G ++   +          P +  
Sbjct: 215 TALDELIAL-----AGLAGETSVTIDLADLGGYQYESGVMFAIYV----------PGLPN 259

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
           +V  GGRYD +   F  +  PATGFS+ +  L   L   E                   +
Sbjct: 260 AVARGGRYDHVGEAFG-RARPATGFSMDLRELARLLPDAEPKLAIRAPW--------GRE 310

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
               +K       LR AG      L   +N  +Q    D   C   ++        G   
Sbjct: 311 PALRTK----IGALRKAGEIVIQSLSGHEN--DQ----DEFECDRVLV-----LEDGNWI 355

Query: 447 IKDL 450
           IK+L
Sbjct: 356 IKNL 359


>gi|83592441|ref|YP_426193.1| tRNA synthetase, class II (G, H, P and S) [Rhodospirillum rubrum
           ATCC 11170]
 gi|109892448|sp|Q2RVD9|HISZ_RHORT RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|83575355|gb|ABC21906.1| tRNA synthetase, class II (G, H, P and S) [Rhodospirillum rubrum
           ATCC 11170]
          Length = 384

 Score = 87.6 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 5/178 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    +       ++ + +++   G++ ++TPL+E+ + L              
Sbjct: 13  LPNGLRDVLPPDAAFEVATVERLVSVFAANGYERVKTPLIEFEEGLL--TGASRATAGQT 70

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D    + + LR D+T  +AR  A        P R    G V R +       RQF 
Sbjct: 71  FRVMDPITQRMMGLRADITIQVARLAASRLAKAPRPLRLTYSGQVLRVKGTQLRPERQFT 130

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           Q  ++ +G+    A AE  ++  + L   G+      + +N   ++  +   +GL  D
Sbjct: 131 QAGIELIGAGGVDAIAESVLLTVEALAQAGL--PRVTVDLNCPPLVPALCRALGLSED 186


>gi|157111534|ref|XP_001651607.1| eukaryotic translation initiation factor 2-alpha kinase [Aedes
            aegypti]
 gi|108883781|gb|EAT48006.1| eukaryotic translation initiation factor 2-alpha kinase [Aedes
            aegypti]
          Length = 1534

 Score = 87.6 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 77/494 (15%), Positives = 137/494 (27%), Gaps = 65/494 (13%)

Query: 7    LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            +   +PR             + +   I  ++  +G   + TP       L  +     R 
Sbjct: 932  MVPIIPR------------FDYVKSKIIELFRKHGAIEVVTP------LLTPYTKTNARN 973

Query: 67   NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
            N     L    G  +SL  DL  P  R+VA N    +               N       
Sbjct: 974  NS--VKLMTHSGSIVSLPDDLRIPFLRHVALNGIKFIRRYSIGRVYREKKVFNFHPKQVY 1031

Query: 125  FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
               F     +      +     +   +   L  +   R +    IN+  +L  IL    +
Sbjct: 1032 ECAFDVVTPNRGNLIVDAELLSIANEIMRELNLLDPSR-NVFFRINHISLLRSILLYCNV 1090

Query: 185  HGDDKLNERLIVLRAIDKL--DKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
              D       IVL   D        +  V   + +     +  +   A      +  +  
Sbjct: 1091 PPDKYKELFEIVLDFFDAKISKFQLIASVSSQITQPGVKVNTGYLCDALQNEMSLSQLNG 1150

Query: 243  FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
             L   L K   E   L K  I   +    L                I I       + Y 
Sbjct: 1151 TLLKTLNKGRGEPAALAKVAIRELEMVASLAQGL---------GVHIPIVVCPGLPVNYE 1201

Query: 303  TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ------NVPATGFSIGIS 356
                   +       + +K     ++  GGRYD  ++ F+         VP    S    
Sbjct: 1202 RAKGGGVVWQLVGELKAKKKNPLTTIAAGGRYDTKLAEFQISGISNGLQVPKVELSGAGF 1261

Query: 357  RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
               +             E   V+I+        L +     + L + GI+  + L    +
Sbjct: 1262 SFHLDKLVYALGPTGGCEPVEVMISITGSRP-PLKEVVQILRSLWSHGIKTGI-LEGIIS 1319

Query: 417  FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                 + A      + ++ G G    G L+++                +W   R  +  +
Sbjct: 1320 ME---ESAKEVGANVVVMLGEG----GELRVR----------------TWNHDRFQECHV 1356

Query: 477  PISELVSTVKKILQ 490
               EL+  + KIL+
Sbjct: 1357 TRPELLGYILKILR 1370


>gi|87200694|ref|YP_497951.1| tRNA synthetase, class II (G, H, P and S) [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87136375|gb|ABD27117.1| tRNA synthetase, class II (G, H, P and S) [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 383

 Score = 87.6 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 86/240 (35%), Gaps = 8/240 (3%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D   ++     R++ +I  +   +G+D +  P +EY  S    +      ++ +
Sbjct: 9   LPEGLEDRLPRDAATATRVMRAIHGVMHGHGYDRVMPPSIEYERSFAARMAG--IQSRRM 66

Query: 71  FSLQDDDG-QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D    + ++LR D T  + R           P R    G V   +  G    R+ +
Sbjct: 67  FRFVDPSSLRMMALRSDFTPQIGRLAETRLAEAPRPLRLCYAGQVVTIKADGLNPSREKL 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           QC  + VG+    A AE+  +  + L+A G       +      ++D + EK       +
Sbjct: 127 QCGAELVGADNVAAAAEVVAIAIEALQAAGATG--VSVDFTLPDLVDTLAEKALPLAPGQ 184

Query: 190 LNERLIVLRAIDK---LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +      L   D     D  G   V LL   G  D + D     +        + +   I
Sbjct: 185 IEAVRRELDTKDAGGLRDVGGEAYVPLLYATGEFDTAIDKLAAIDAGGALASRIDALRQI 244


>gi|322698161|gb|EFY89933.1| protein kinase (Gcn2), putative [Metarhizium acridum CQMa 102]
          Length = 1595

 Score = 87.2 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 71/494 (14%), Positives = 153/494 (30%), Gaps = 62/494 (12%)

Query: 14   GFADCPTKEIRIRNR--ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            G          + N+  +  ++ +I+  +G   +E P    +    +      +  + V 
Sbjct: 999  GTQ---PSASELLNQGVVRSTLISIFRRHGA--LEMP---RTSIYPRSS----QYGENVV 1046

Query: 72   SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ---F 128
             + D +G  + L +DLT   AR +A          R++    V+R+       +      
Sbjct: 1047 QVLDSNGTVLQLPFDLTMGNARMIA-KQAGGPILQRSFYFSNVYRDRLDTGQPYMFGEVD 1105

Query: 129  IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
                  +    A      + ++         +        + +  +L  I +  G+    
Sbjct: 1106 FDIVTTDTLDLALKEAEVLKVLDEIVQAFPSLSNAQMCFQVGHSDLLQLIFDHCGVESSC 1165

Query: 189  KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID- 247
            +      + +    +     Q V+  L           +    +++  +D +  F   D 
Sbjct: 1166 RRQAAEALSKLH--VHGHTWQKVRAELR----------STTVGVSATSVDELQRFDFRDT 1213

Query: 248  LEKSMHELYELVKGTIAGEKG---FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
              K + +L  L +G+   ++       L  ++E  ++ G  S         +R   +  G
Sbjct: 1214 PNKVISKLKVLFEGSDLYQRAVSTMAHLKEVAEYCKRFGVISKLYVSPLNSLRENFFMGG 1273

Query: 305  CVYEAILG------FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             ++  +        F         +       GG ++   +                S  
Sbjct: 1274 IMFSCVYDRKTRDVFAAGGRYDHLIKEQRPKIGGNFEERHAVGFSLAWERLARVPNKSGS 1333

Query: 359  IVALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
               LK  ES +N I       +     D+    S      Q+L    I AEM    +++ 
Sbjct: 1334 KTFLKKQESDSNTIFTGKRCEVLVASFDAAILRSTGIEVLQLLWDHDISAEMA-KDARSP 1392

Query: 418  GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             + L      N    I+         ML+IK +                    V  + IP
Sbjct: 1393 EDLLSKHRDENYSWIIVIKPE----AMLKIKTM----------------NRKDVQDVDIP 1432

Query: 478  ISELVSTVKKILQE 491
            +S+L++ ++  L+E
Sbjct: 1433 LSQLMAWLRPELKE 1446


>gi|260462251|ref|ZP_05810495.1| prolyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259032111|gb|EEW33378.1| prolyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 442

 Score = 87.2 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 61/454 (13%), Positives = 124/454 (27%), Gaps = 71/454 (15%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+ +++   IR      G   I  P ++ +D L +     D   K +  ++D  
Sbjct: 42  WLPLGKRVLDKVCQIIREEQNRAGALEILMPTIQSAD-LWRESGRYDDYGKEMLRIKDRQ 100

Query: 78  GQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
            + +       ++   + R   +++  +      Y I   FR+E        +  +  + 
Sbjct: 101 DRDMLYGPTNEEVVTEIVRAYVKSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSREFLMK 158

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           +  S     +          +  +             R  L  I                
Sbjct: 159 DAYSFDLDFEGAKAAYNRMFVSYL---------RTFTRMGLQAI---------------- 193

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH- 253
                           ++   G    D S +F   A+    Q+     +LS+ +      
Sbjct: 194 ---------------PMRADTGPIGGDLSHEFIILADTGESQVYCDRDYLSLQVPGENTD 238

Query: 254 -----ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                E+ ++VK         +E+   +   +         +      RG+E      + 
Sbjct: 239 FANDGEIADIVKTWTTPYAATDEMHDQAAWDKLG-------EADRVSARGIEVGHIFHFG 291

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                P+  +   P        GG Y    SR       A           +      + 
Sbjct: 292 DKYSKPMGAKVTGPDGKDHFVSGGSYGIGPSRLV-----AAIIEASHDENGIIWPEAVAP 346

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +       V     D   D L            AG    ++  + +  G +   AD   
Sbjct: 347 FDIGVINMKVGDADCDRVCDELYAAFA------DAGKDV-LYDDTDQRPGGKFATADLIG 399

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            P  +I G    + G ++IK+   G+  +  I  
Sbjct: 400 LPWQVIVGPRGVAAGEVEIKNRKTGERETLPIAE 433


>gi|251771413|gb|EES51992.1| Histidyl-tRNA lygase [Leptospirillum ferrodiazotrophum]
          Length = 446

 Score = 87.2 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 82/398 (20%), Positives = 143/398 (35%), Gaps = 39/398 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P G +   ++  R R    D +  ++  YG+  I  P  EY D++   L     P   +
Sbjct: 19  TPTGVSPVFSRTARFRRETTDRLLALFSLYGYREIILPSFEYLDAISPGLDPAILPR--L 76

Query: 71  FSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           + +QD   GQ + LR D TA +AR   ++F   + P R      VFR+E       R+  
Sbjct: 77  YLMQDRGSGQVLVLRPDATAQIARLSTQSFRDRMLPLRFSYSTSVFRDENRQASLLRELH 136

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++ +G S+  AD E+  +         ++                + E+        
Sbjct: 137 QTGLELLGDSSFHADLEVLDLCLAGSRVFPLES------PLLVLAHAALQEEYLRLPGGT 190

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
              +L + RA    D   L+ +    G            G  L+  +   +VS L  +  
Sbjct: 191 REAQLSLRRAFHSRDVEALEELFEQNGSKERARIAASLAGRVLSLPEAIDLVSGLEKNCP 250

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                       +      F  L+     +R    NS+ +++   +     YYTG  +  
Sbjct: 251 GIF---------SEGSLSSFAALLQGISGIR----NSSEMRVDLALSPPGPYYTGMFFRM 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +     +          +  GGRYD L   F   ++PA GF+  IS +  AL+  E   
Sbjct: 298 YVRESSTH----------MASGGRYDRLGLAFGH-DLPAVGFAYQISHIEEALRRREG-- 344

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            + ++   VL+   + D   L         LR+  +  
Sbjct: 345 -DGQDSSLVLVLHSEKDFSDLGPAI---SRLRSDKVPV 378


>gi|291280491|ref|YP_003497326.1| ATP phosphoribosyltransferase regulatory subunit [Deferribacter
           desulfuricans SSM1]
 gi|290755193|dbj|BAI81570.1| ATP phosphoribosyltransferase regulatory subunit [Deferribacter
           desulfuricans SSM1]
          Length = 365

 Score = 87.2 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 65/328 (19%), Positives = 115/328 (35%), Gaps = 40/328 (12%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD-DGQWI 81
            +  N+++  +   +EN G+  ++ P+ E+ D L       D  ++ +    D   G+ +
Sbjct: 8   AKKLNKVVSILTEYFENNGYSEVQLPIYEFYDLLE--GVTWDFKDENIIRFIDRYTGKSL 65

Query: 82  SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
            LR D T    R+V+        P R    G +FRN     G   +  Q   +  G    
Sbjct: 66  VLRPDFTPQACRFVSLYMKDYPLPIRISYKGRIFRNVDLNKGLKSEKYQVGCELFGVKEF 125

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
             D E+  +  ++L+ +G+K                         D K+      L    
Sbjct: 126 LGDIEIIYLAYNSLKQLGLK-------------------------DYKIVIGDSYLVKEI 160

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS-MHELYELVK 260
                  Q +   L E   D          L  ++ +++ S +    EK+ + EL     
Sbjct: 161 VKSFGNDQSIIKCLKEKNLDKLKKLYADKVLHEDEYNMLFSMIKGFGEKAVLDELILDAT 220

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
            +    +    L  + E +   G     I   +T +RG  YYTG  ++ I     +    
Sbjct: 221 FSNGIRQRLIYLRDLIERLFDIGIPEKDIVFDATEMRGFNYYTGVNFDIIKSDGTV---- 276

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
                  +GGGGRYD L+ +F       
Sbjct: 277 -------IGGGGRYDNLMDKFNWPLQSC 297


>gi|332366983|gb|EGJ44723.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK1059]
          Length = 329

 Score = 87.2 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 132/362 (36%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAHEAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+  +   +     
Sbjct: 166 SLALDSQEEAQ-------------------LLDYIRKKNRTGIFEFTQTRSSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V      E+    L  + +++R      ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIVDN----ERILMALDDVEQVLRSLSGLLDQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|328946445|gb|EGG40585.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK1087]
          Length = 329

 Score = 87.2 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 132/362 (36%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDYVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+ +    +     
Sbjct: 166 SLALDSQEEAQ-------------------LLDYIRKKNRTGLFEFTQTSPSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V      E+    L  + +++R      ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIVDN----ERILMALDDVEQVLRSLSGLLDQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|116070525|ref|ZP_01467794.1| Histidine--tRNA ligase [Synechococcus sp. BL107]
 gi|116065930|gb|EAU71687.1| Histidine--tRNA ligase [Synechococcus sp. BL107]
          Length = 392

 Score = 87.2 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 68/416 (16%), Positives = 146/416 (35%), Gaps = 49/416 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  D   +++     + + +  ++  +G+D +  P +E   +L          
Sbjct: 1   MALQPAAGARDLNPRQVETNRNLTERLARVFRLWGYDEVSPPRVERMKTLMAGGA---IA 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +  L       + LR ++TA +AR       T   P R +  G VFR+     G   
Sbjct: 58  SRDIVRLV--ADDPLGLRPEMTASIARAACTRLATRPRPMRLWASGTVFRSRAADEGGQC 115

Query: 127 QFI--QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
                Q  V+  G +A  A+ E+  ++  ++ A+ + R      +     L  ++  +  
Sbjct: 116 IEENLQSGVELFGVAAIEAEMELLSLLMASIAALKLGRLTQPRLLLGHTQLMELI--LSP 173

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           +   K +     L   D+L    ++                      L   Q   +++  
Sbjct: 174 YAGPKRDAVRSALIHFDRLAVETME----------------------LLPNQRQTLLAL- 210

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG-YNSNRIKISSTIVRGLEYYT 303
            ++   +  ++ + ++     +  F++L  +  L+ K+       +++  T     E YT
Sbjct: 211 -MECRGTPTDVLQQLQQLFGQQPVFDDLDRLCSLLSKTALEQEVVLQLDPTFQPQFELYT 269

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVA 361
           G V++ +       E         +  GGRYD LV R       A   GFS+ I  +   
Sbjct: 270 GLVFQLVCNGRSAPE--------VLARGGRYDELVQRCGAPPNQAFGAGFSLAIDSIREL 321

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           +    S     K      +      + +L     + +     G RA + L   ++ 
Sbjct: 322 MVEDNSVQAEAKN-----VLVAYSSNANLETALDHQRQWHAKGHRAVLELQPIRSI 372


>gi|332362569|gb|EGJ40369.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK1056]
          Length = 329

 Score = 87.2 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVIYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++            +L  +  +  +  L E     + +F              
Sbjct: 166 SLALDSQEEA-----------QLLDYIRKKNRTGLFEFTQTRASEFDDFLQE-------- 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V      E+    L  + ++++       +  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIVGN----ERILTALDDVEQVLQSLSGLLEQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|300767983|ref|ZP_07077890.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300494436|gb|EFK29597.1| ATP phosphoribosyltransferase for histidine biosynthesis
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 383

 Score = 87.2 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+  LP G  D   +  R +  ++  I+  ++  GF PI TPLLE       +       
Sbjct: 2   LKHLLPLGTRDEFGRRARTKQHLIAVIQAHFKQRGFAPIATPLLENEAVFDPY----QMG 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           N  ++ L  +DG+ + LR D+T P+AR+++     +               +  G     
Sbjct: 58  NYQLYRLFGNDGRTLVLRPDMTLPVARFISATNVPLPQKFGYVGDIFRVSRQLSGSYNQI 117

Query: 127 QF 128
             
Sbjct: 118 TQ 119


>gi|115746620|ref|XP_792817.2| PREDICTED: similar to Eukaryotic translation initiation factor
            2-alpha kinase 4 (GCN2-like protein) [Strongylocentrotus
            purpuratus]
 gi|115970830|ref|XP_001190256.1| PREDICTED: similar to Eukaryotic translation initiation factor
            2-alpha kinase 4 (GCN2-like protein) [Strongylocentrotus
            purpuratus]
          Length = 1517

 Score = 87.2 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 67/480 (13%), Positives = 150/480 (31%), Gaps = 59/480 (12%)

Query: 26   RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRY 85
            +  + D+++ I++ +G   I T +L       K     D          D  G  ++L Y
Sbjct: 954  QQMVYDTVQRIFQKHGAVRINTIMLLPK---TKLYEHSDMCA----HFMDHSGGIVTLPY 1006

Query: 86   DLTAPLARYVAENF--DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETA 143
            DL  P ARY+A N   +   +                       F            +  
Sbjct: 1007 DLRVPFARYIARNNVTNLKRYSIERVYRERKLFGSHPRELTECAFDIVTNSPGSLQPDAE 1066

Query: 144  DAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL 203
               +   + +    +  +  +Y I +N+  +L  IL   G+  +   +    +       
Sbjct: 1067 VLHLVTEIINEFPELQTR--NYSIRLNHTGLLTAILNYCGVPVELHGSLYRTL------- 1117

Query: 204  DKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELV--- 259
                    +          +     G + T +Q+  +  ++ ++     +    + +   
Sbjct: 1118 -------NEARTERLTKVQTQTRLCGMSFTEQQVASLYQYIDLECPLSKLTSTLKPLTRG 1170

Query: 260  --KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
              +     ++  +EL VI    +  G     + I+  +V  ++ ++G V++ +     + 
Sbjct: 1171 QGQNASMVKQALHELEVIISQAQVYGVRL-EMLINVGLVYNIQIFSGVVFQFV---ASIG 1226

Query: 318  EKQKPVVFGSVGGGGRYD------GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
              +K      +  GGRYD            +          I +S   +    L+ S ++
Sbjct: 1227 RPKKRPTMDVLAAGGRYDILIPEFKKPHSTQQNVPGPLAVGISVSFEKIITAVLQESQSD 1286

Query: 372  IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
            I      ++      S  +       + L  AG +A++    S +      Y        
Sbjct: 1287 ITLSICDILVVSVGSSTLIRDRIKVVRNLWAAGFQADVLYDDSLSLEEAQDYCRAMGISH 1346

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             +I            +KD          IK     +E  + + ++    LV  ++  L +
Sbjct: 1347 LVI------------LKDSDT------LIKVRSFDKEKVIVESSVGFYNLVEHLQMKLNK 1388


>gi|324993973|gb|EGC25892.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis SK405]
          Length = 329

 Score = 87.2 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 69/362 (19%), Positives = 130/362 (35%), Gaps = 48/362 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G     A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPVRDAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++                     +   + +       +FT+  +   +     
Sbjct: 166 SLALDSQEEAQ-------------------LLDYIRKKNRTGIFEFTQTRSSEFDDFLQE 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V      E+    L  + ++++      ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIVDN----ERILTSLDDVEQVLQSLSGLLDQTTMDLGQVATMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYT   ++               V  +   GGRYD L  RF    + A G+S+ I  +  
Sbjct: 263 YYTALTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDIDSVYQ 312

Query: 361 AL 362
           A+
Sbjct: 313 AI 314


>gi|317490123|ref|ZP_07948612.1| prolyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325833438|ref|ZP_08165887.1| proline--tRNA ligase [Eggerthella sp. HGA1]
 gi|316910828|gb|EFV32448.1| prolyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325485362|gb|EGC87831.1| proline--tRNA ligase [Eggerthella sp. HGA1]
          Length = 584

 Score = 86.8 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 66/539 (12%), Positives = 126/539 (23%), Gaps = 69/539 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++ + +R   +  G   I  P L+  + L       +     
Sbjct: 40  KTASGVYTFLPLGKRVLAKVENIVREEMDGIGAQEIMMPALQPGE-LWHESGRWNDYGPE 98

Query: 70  VFSLQDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +  L D   +   L     +L   L     R   E   ++      +R     R      
Sbjct: 99  LMRLVDRHDREFCLGPTHEELITSLVRNELRSYKELPLSLYQIQVKFRDEIRPRFGLLRS 158

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI-----KRNDYHIGINNRKILDG 177
             F             S +    +M        + +G+     + +   IG +       
Sbjct: 159 REFIMKDAYSFHADQESLQKTYDDMSEAYGRICDRMGMDYRPVEADPGQIGGSVTCEFMA 218

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK-------------LLLGEGRTDNSG 224
           + E                  A D L +  +  V               L        S 
Sbjct: 219 LAEAGEAELVHCTCGYAANTEAGDCLARPTVYDVPMEKVATPGVHTIAELAAFLDIPESS 278

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                +    E   +++          +         T+  ++      +    +   G 
Sbjct: 279 TVKALSGKNDEGKLVVMFIPGDHELNELKAARVAGGFTLLTDEDMEAFGLHKGSMGPVGL 338

Query: 285 NSNRI-------KISSTIVRGLEYYTGCVYEAILG--FPVMNEKQKPVVFGSVGG----- 330
                       +     V G          A LG  F V       +V           
Sbjct: 339 PEEAYVIAARSLQAVPKWVVGANEDGYHYVGARLGEDFQVDEWADLCIVQPGDSCPSCGL 398

Query: 331 ----------------GGRYDGLVSRFKG------QNVPATGFSIGISRLIVALKSL--- 365
                           G +Y   +           Q      + +GISR + A+      
Sbjct: 399 PLDGARGIEVSQVFQLGDKYSKAMGATFMAEDGSEQPFLMGCYGVGISRTMAAIVEQHND 458

Query: 366 --ESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                         V +  +   D +     +     L   G+   +     +  G +  
Sbjct: 459 ENGIMWPLTVAPAHVCVIPLTVGDDEVQPAAEKLASDLAKLGLEVVIDDRKERA-GVKFA 517

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
            AD    PL +I G    +   ++IK  + G      +               +  SEL
Sbjct: 518 DADLIGWPLQVIVGKRGLAEQKVEIKRRSTGARRDIPLAALTDALAFSQRNAKVWGSEL 576


>gi|116627973|ref|YP_820592.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
           [Streptococcus thermophilus LMD-9]
 gi|122267431|sp|Q03K76|HISZ_STRTD RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|116101250|gb|ABJ66396.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           thermophilus LMD-9]
          Length = 326

 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 73/361 (20%), Positives = 133/361 (36%), Gaps = 48/361 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T     L  G  D   K  R   +I   I ++    GF  IETP LE+ +      
Sbjct: 1   MKKTT-----LALGMHDKLFKRARTMYQIEHCICDLLMTKGFLRIETPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D  + G ++  D +G  ISLR D+T+ + R +A     +  P +    G VF   + 
Sbjct: 52  --SDVVDNGNYNFFDKNGDLISLRPDITSQIGRVIAS--TQVHTPIKFSYSGKVFNYNEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  V+ +G     A  E  +   + L+  G++  +Y    ++ ++L  I E
Sbjct: 108 MRGLSNEHTQAGVEIIGFPVHQALEEAVISAKEALDVAGVR--NYKFEFSHAQLLQLIFE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           ++ L    +                     +   + +       +FTK      +++   
Sbjct: 166 ELNLPAVKEA-------------------ELATYIRDKSITGLKEFTKENPSQYDKVLEQ 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L  +    + E  + +    +     + L V++  +     N     +    +  + 
Sbjct: 207 LPSLFGETTAVLTEARQ-LTDNESFLTALDSLEVLTSRLAD---NLPETTLDLAQLPAVP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG +++               V  +   GGRYD L  RF    + A G++I I  +  
Sbjct: 263 YYTGIMFKVF----------GDKVPDAFVSGGRYDKLFERFGATELTAVGWAIDIDSVYQ 312

Query: 361 A 361
           A
Sbjct: 313 A 313


>gi|320168858|gb|EFW45757.1| eukaryotic translation initiation factor 2-alpha kinase [Capsaspora
            owczarzaki ATCC 30864]
          Length = 2199

 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 77/530 (14%), Positives = 154/530 (29%), Gaps = 100/530 (18%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +RNR+L+ +  ++ ++G   +  P       L   +   D PN  +  + D  G  ++L 
Sbjct: 1507 VRNRLLERMLPVFLHHGAIEMAPP------LLLPSICLADTPN--IVHMLDRMGNVLALP 1558

Query: 85   YDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
            YD T   ARYVA N    +   R  ++                F   D     S     D
Sbjct: 1559 YDPTLGFARYVARNNIHFLKRYRVDQVFREGVAANPSQFNEAAFDIVDASACSSLLP--D 1616

Query: 145  AEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL 203
             E+     + L  +    + +Y I IN+  I   IL   G+  D        +      +
Sbjct: 1617 IEVLYTTYEVLREIPTSSSFNYTIRINHGAITYAILRHCGVPEDRYFEVCKQLTPDKLSI 1676

Query: 204  DKFGLQGVKLL--LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
             +   + V  L  L     +            ++    +   LS  +             
Sbjct: 1677 LQLKRRLVTELRVLDGASAELLLLHFAIKGTVNDVGAKIKPLLSSTVPGV---------- 1726

Query: 262  TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG-------FP 314
            + +  +G  +L  + +  +  G     I +  ++V+   YY G  ++ +          P
Sbjct: 1727 SESAARGLRDLRTLMDYAKYFGIQQ-AIFLDLSLVQRQHYYNGMYFQFVRPVAQRSPSAP 1785

Query: 315  VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
              +       +  V  GGRYD LV  F+ Q        +    +++ ++ L +       
Sbjct: 1786 SKSGDFGGRKYDVVAYGGRYDRLVQSFQLQQDEIATAPVAAVGVVIRIEQLMADAFWKGT 1845

Query: 375  MG-------------------------------------------------PVLITTMDH 385
                                                                  +   + 
Sbjct: 1846 YDPDKDYVQDMMRGVGVTHFPFSGLPPHLQSIAGAKGDEKRALLGERSAGCQSDVLVFEV 1905

Query: 386  DSDSLSKYQMYTQMLRTAGIRAEMFLG--SSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
                        Q L  AGIRA++       +   +  ++         +     +    
Sbjct: 1906 GKSVFEARLQCVQELWAAGIRAQITYDPLQREKIESLHQFCKEAGINWVV-----QLKDQ 1960

Query: 444  MLQIKDLAKGKELSREIKNNESWREARVAQ-------------ITIPISE 480
             +++++L    E      +  ++    + Q              T+P SE
Sbjct: 1961 AVKVRNLETKFETEVVRADLANFLVNAIRQAQSQPPGVSRRSAQTVPTSE 2010


>gi|257792203|ref|YP_003182809.1| prolyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257476100|gb|ACV56420.1| prolyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 578

 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 66/539 (12%), Positives = 127/539 (23%), Gaps = 69/539 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++ + +R   +  G   I  P L+  + L       +     
Sbjct: 34  KTASGVYTFLPLGKRVLAKVENIVREEMDGIGAQEIMMPALQPGE-LWHESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +  L D   +   L     +L   L     R   E   ++      +R     R      
Sbjct: 93  LMRLVDRHDREFCLGPTHEELITSLVRNELRSYKELPLSLYQIQVKFRDEIRPRFGLLRS 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI-----KRNDYHIGINNRKILDG 177
             F             S +    +M        + +G+     + +   IG +       
Sbjct: 153 REFIMKDAYSFHADQESLQKTYDDMSEAYGRICDRMGMDYRPVEADPGQIGGSVTCEFMA 212

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK-------------LLLGEGRTDNSG 224
           + E                  A D L +  +  V               L        S 
Sbjct: 213 LAEAGEAELVHCTCGYAANTEAGDCLARPTVYDVPMEKVATPGVHTIAELAAFLDIPESS 272

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                +    E   +++          +         T+  ++      +    +   G 
Sbjct: 273 TVKALSGKNDEGKLVVMFIPGDHELNELKAARVAGGFTLLTDEDMEAFGLHKGSMGPVGL 332

Query: 285 NSNRI-------KISSTIVRGLEYYTGCVYEAILG--FPVMNEKQKPVVFGSVGG----- 330
             +         +     V G          A LG  F V       +V           
Sbjct: 333 PESAYVIAARSLQAVPKWVVGANEDGYHYVGARLGEDFQVDEWADLCIVQPGDSCPSCGL 392

Query: 331 ----------------GGRYDGLVSRFKG------QNVPATGFSIGISRLIVALKSL--- 365
                           G +Y   +           Q      + +GISR + A+      
Sbjct: 393 PLDGARGIEVSQVFQLGDKYSKAMGATFMAEDGSEQPFLMGCYGVGISRTMAAIVEQHND 452

Query: 366 --ESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                         V +  +   D +     +     L   G+   +     +  G +  
Sbjct: 453 ENGIMWPLTVAPAHVCVIPLTVGDDEVQPAAEKLASDLAKLGLEVVIDDRKERA-GVKFA 511

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
            AD    PL +I G    +   ++IK  + G      +               +  SEL
Sbjct: 512 DADLIGWPLQVIVGKRGLAEQKVEIKRRSTGARRDIPLAALTDALAFSQRNAKVWGSEL 570


>gi|32455224|gb|AAP83326.1| histidine-tRNA synthetase putative [Salmonella enterica subsp.
           enterica serovar Enteritidis]
          Length = 87

 Score = 86.8 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 387 SDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
           + + S      + LR    G++     G   NF  Q   AD+    +A++ G  E + G 
Sbjct: 1   AQTQSAAMTLAERLRDEMPGVKLMTNHGGG-NFKKQFARADKWGARIALVLGESEVADGT 59

Query: 445 LQIKDLAKGKELSREIKNNESWRE 468
           + +KDL  G++ +    +  +   
Sbjct: 60  VVVKDLRSGEQTAVAQDSVAAHLR 83


>gi|264679413|ref|YP_003279320.1| tRNA synthetase, class II (G, H, P and S) [Comamonas testosteroni
           CNB-2]
 gi|262209926|gb|ACY34024.1| tRNA synthetase, class II (G, H, P and S) [Comamonas testosteroni
           CNB-2]
          Length = 355

 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 65/335 (19%), Positives = 124/335 (37%), Gaps = 44/335 (13%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD-DGQWISLRYDLTAPL 91
           + +   +YG++ +  P+LEY +SL     +          L D   G+ + LR D+T  +
Sbjct: 1   MLDTARSYGYELVMPPMLEYLESLLTGTGEALAL--QTSKLIDQLSGRTMGLRADMTQQV 58

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
           AR  A +        R    GPV       P   R+  Q   +  G     AD E   + 
Sbjct: 59  ARIDA-HLLNRKGVTRLCYCGPVVHARPDRPRATREPFQFGAEIYGHEGLEADLEALHLA 117

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
            D L+  G+K  D  + + + +I+  +L  + +                       L+GV
Sbjct: 118 LDCLKGAGVK--DVIVDLADVRIVRSLLAGVMVDEQV-------------------LRGV 156

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKGTIAGEKGFN 270
              L           T+         + +++ L +    + + +  +L++ T       +
Sbjct: 157 HAALASKDATELAQLTRDFP--EASREGLMALLQLYGGMEVLDQAEKLLERTAGVRNVLS 214

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
            L  + + +        ++      +RG  YY+G  +   +          P    ++  
Sbjct: 215 HLRWLVQHLD-----GVKVSFDLADLRGYSYYSGTRFAIYV----------PGGSDALVR 259

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           GGRYD + + F  +N PA GFS+ I +L+  +   
Sbjct: 260 GGRYDEVGAVFG-RNRPAAGFSLDIKQLVAVVPER 293


>gi|322712849|gb|EFZ04422.1| protein kinase (Gcn2), putative [Metarhizium anisopliae ARSEF 23]
          Length = 1627

 Score = 86.4 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 64/479 (13%), Positives = 147/479 (30%), Gaps = 48/479 (10%)

Query: 14   GFADCPTKEIRIRNR--ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            G          + N+  +  ++ +I+  +G   +E P    +    +      +  + V 
Sbjct: 1031 GTQ---PSASELLNQGVVRSTLISIFRRHGA--LEMP---RTSIYPRSS----QYGENVV 1078

Query: 72   SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ---F 128
             + D +G  + L +DLT   AR +A          R++    V+R++             
Sbjct: 1079 QVLDPNGTVLQLPFDLTMGNARMIA-KQTGGPILQRSFYFNNVYRDKLDTGQPSVFGEVD 1137

Query: 129  IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
                  +    A      + ++         +        + +  +L  I +  G+    
Sbjct: 1138 FDIVTTDTLDLALKEAEVLKVLDEIVQAFPSLSNAQMCFQVGHSDLLQLIFDHCGVESSC 1197

Query: 189  KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID- 247
            +      + +    +     Q V+  L           +    +++  +D +  F   D 
Sbjct: 1198 RRQAAEALSKLH--VHGHTWQKVRAELR----------STTVGVSATSVDELQRFDFRDT 1245

Query: 248  LEKSMHELYELVKGTIAGEKG---FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
              K++ +L  L +G+   ++       L  ++E  ++ G  S         +R   +  G
Sbjct: 1246 PNKAISKLKVLFEGSDLYQRAMPTMAHLKEVAEYCKRFGVISKFYVSPLNSLRENFFMGG 1305

Query: 305  CVYEAILG------FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             ++  +        F         +       GG ++   +                S  
Sbjct: 1306 IMFSCVYDRKTRDVFAAGGRYDHLIKEQRPKIGGNFEERHAVGFSLAWERLARVPNKSGS 1365

Query: 359  IVALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
               LK  ES +N +       +     D+    S      Q+L    I AEM    +++ 
Sbjct: 1366 KTFLKKQESDSNTMFSGRRCDVLVASLDAAILRSTGIEVLQLLWDHDISAEMA-KDARSP 1424

Query: 418  GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREARVAQI 474
             + L      N    I+         ML+IK + +    ++   +    +W    + + 
Sbjct: 1425 EDLLSKHRNENYSWIIVIKPE----AMLKIKTMGRKDVQDVDIPLGQLMAWLRPELKER 1479


>gi|53803937|ref|YP_114411.1| ATP phosphoribosyltransferase regulatory subunit [Methylococcus
           capsulatus str. Bath]
 gi|81823627|sp|Q606N7|HISZ_METCA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|53757698|gb|AAU91989.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 406

 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 121/375 (32%), Gaps = 49/375 (13%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYV 95
           +  +G+  +  PL+E+ DSL      +       F L D   G+ + +R D+T  +AR  
Sbjct: 40  FAAWGYRLVMPPLIEFIDSLLTGAGHDLDI--QTFKLIDQASGRLLGIRADMTPQVARID 97

Query: 96  A-ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADT 154
           A  +            +G V   +     + R  IQ   +  G S   +D E+  +M + 
Sbjct: 98  ARTHAGDTPGRF--CYLGSVLHTQADRLEKSRSPIQFGAELYGHSGRASDLEIIRLMLEV 155

Query: 155 LEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL 214
           L   G+     H+ + +  I  G+  + GL G+ +                     +  L
Sbjct: 156 LTTAGV--ERIHLDLGHVGIFRGLARQAGLTGEQEG-------------------ELFSL 194

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE--LVKGTIAGEKGFNEL 272
           L +             ++      +    + ++    + E     L +   A      EL
Sbjct: 195 LQQKARPELTAAVASLDIDPPLARMFTELVDLNGRHGVMERARECLSEANAAVHMALEEL 254

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            V++E +         +      +RG  Y TG V+ A +          P     +  GG
Sbjct: 255 AVLAERLGDC-CPEVPVNFDLAELRGYRYQTGVVFAAFV----------PGYGREIARGG 303

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           RYD +   F          +   + L V L+      + +     +    +         
Sbjct: 304 RYDDIGKVFGRAR----PATGFSADLKVVLRLSGLGESFVGSGEAIFAPAVSD-----PA 354

Query: 393 YQMYTQMLRTAGIRA 407
                + LR AG   
Sbjct: 355 LIAAIRELRDAGRIV 369


>gi|95930704|ref|ZP_01313437.1| prolyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133184|gb|EAT14850.1| prolyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 571

 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 65/556 (11%), Positives = 144/556 (25%), Gaps = 90/556 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R   ++   +R   +  G   +  P++  +  L +     ++ 
Sbjct: 31  MIRKVAAGIYTYLPLGLRSIRKVEQIVREEMDRAGAMELLMPMVVPAG-LWEESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +  ++D       L         D+     R   +    +      +R     R   
Sbjct: 90  GKELLRIRDRKDTEFCLGPTHEEVITDVVRGTVRSYRQLPLNLYQIQGKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK------------------ 161
                F        D   + A+TA  +M        +  G+K                  
Sbjct: 150 MRGREFIMKDAYSFDLEDAGADTAYEKMYQAYQRIFKRCGLKFRAVEADTGNIGGSSSHE 209

Query: 162 -------RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL 214
                    D  +  +       + +           E    L+ ID  ++  +  V   
Sbjct: 210 FMVLAESGEDAIVSCDQCDYAANVEKAQMRQEQGSSGEGQAELQKIDTPERKTIAEVAEF 269

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL-- 272
           L    +          + T EQ+ +++       E  +    + ++  + G+    EL  
Sbjct: 270 LDMDHSRLIKTLLVQTD-TGEQLAVLLRGDRELNEIKLCRYLDCLEVVMLGDIAVEELTG 328

Query: 273 ------------VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                         I   +         +  +   V  +    G  +       +   + 
Sbjct: 329 APVGFAGPVGLDCRILADLEVQSMADAVVGGNEKDVHYMGANPGRDFSVEAYADLRQAQA 388

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQ---------------------NVPATGFSIGISRLI 359
                   G    + G+      +                      +    + IGI R +
Sbjct: 389 GDGCPRCDGTLQMWRGIEVGHVFKLGTKYSEALGATVLNAEGKEAPLVMGCYGIGIGRTV 448

Query: 360 VALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
            A                I     ++      D   +       Q L  AG+   +    
Sbjct: 449 AAAIEQNHDDQGVIFPMPIAPFQVIITLLNPKDEQVMQAGSELYQQLMDAGVEVLLDDRD 508

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +  G++ K A+    P+ +  G      G  +++   +G+ +   +    SW       
Sbjct: 509 ER-PGSKFKDAELIGIPIRVTVGNRALKEGAFEVQKRLEGERMMMPVAETLSW------- 560

Query: 474 ITIPISELVSTVKKIL 489
                  LV  VK+ L
Sbjct: 561 -------LVDEVKRQL 569


>gi|262375446|ref|ZP_06068679.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           lwoffii SH145]
 gi|262309700|gb|EEY90830.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           lwoffii SH145]
          Length = 388

 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 79/442 (17%), Positives = 146/442 (33%), Gaps = 68/442 (15%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++   +     +   + G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVIESLRRKSLDFLASRGYQLVYTPFIEYIESLSSLSESNQDLDLAT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   +    R    G V   +  G    R  +
Sbjct: 69  FKVIDQLSGRLLGVRADMTPQVARIDA-HVHPVEGVARYCYAGTVLHTKPRGFNTSRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  GS +  AD EM  +M   ++  G+        I+      G+   +       
Sbjct: 128 QLGAELFGSDSIDADVEMVDLMISLIQETGLADG-----IHLDLGHVGLFRSLVAQAGLN 182

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 +     +     L+     L        G         +  +D + + LS +  
Sbjct: 183 KVAEQQLSDLYQRKALPELEEFTADL------KFGQDFYALGRYASDLDALQAHLSAE-- 234

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                    V    A  + FN L    + V ++ + +  I I    +R   Y+TG +Y  
Sbjct: 235 ---------VLANPAFTQAFNVLQTTKDEV-QTRWPNLSIGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            ++  GGRYDG+   F          + G S  + AL +     
Sbjct: 285 YAPNRAA----------ALAQGGRYDGIGEHF-----GRARPATGFSCDLYALSA----- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
               +   V +      +D  ++     Q +R  G+     LG+           D  + 
Sbjct: 325 ---GQFDAVQVVVAPKGTD--AELLNAIQNIRAQGLSVIQLLGND----------DLNSI 369

Query: 430 PLA---IIQGTGERSRGMLQIK 448
           P A   ++      + G   +K
Sbjct: 370 PYATHQLV-----NANGEWTVK 386


>gi|323351326|ref|ZP_08086982.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis VMC66]
 gi|322122550|gb|EFX94261.1| ATP phosphoribosyltransferase regulatory subunit [Streptococcus
           sanguinis VMC66]
          Length = 329

 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 74/356 (20%), Positives = 130/356 (36%), Gaps = 48/356 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K       LP G  D   K  R+   I   I +     GF+ I+TP LE+ +      
Sbjct: 1   MNK-----ITLPIGMHDKLFKRARVTYEIERDISDFLMAQGFNRIDTPTLEHFEVF---- 51

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D      + L D  G+ + LR D+T+ + R +A     +  P +    G VF  ++ 
Sbjct: 52  --SDHVEPHHYHLFDKKGELLVLRPDVTSQIGRVIAS--TRVHTPTKFSYSGKVFHYQEE 107

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G   +  Q  ++ +G  A  A  E       +L+   +K   +    ++  IL  ILE
Sbjct: 108 LRGLANELSQAGIEIIGYPAREAVLEAIKTAKQSLDLAQVKSYQFE--FSHAAILQTILE 165

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L   ++            +L  +  +  +  L E     S +F              
Sbjct: 166 SLALDSQEEA-----------QLLDYIRKKNRTGLFEFTQTRSSEFDDFLQE-------- 206

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +L    ++ +    E+V      E+    L  + +++R      ++  +    V  + 
Sbjct: 207 LPYLFGPSQQVLARAREIVDN----ERILMALDDVEQVLRSLSGLLDQTTMDLGQVAAMP 262

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           YYTG  ++               V  +   GGRYD L  RF    + A G+S+ I 
Sbjct: 263 YYTGLTFKVF----------GDRVPDAFLSGGRYDQLFKRFGAAELTAIGWSLDID 308


>gi|310779485|ref|YP_003967818.1| prolyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748808|gb|ADO83470.1| prolyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 570

 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 58/560 (10%), Positives = 149/560 (26%), Gaps = 96/560 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         +   ++   +R   E  G   I  P+L+ S+   +     D  
Sbjct: 31  MIKKLASGVYTYLPLGYKALRKVEKIVREEMERAGSQEIFMPVLQPSEIWQES-GRWDTM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   L     ++   + R    ++ ++       +             
Sbjct: 90  GPEMMRIKDRHDREFVLGPTHEEVITDIVRNDISSYKSLPMNLYQIQTKFRDERRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI- 178
                F               +     M        E  G+K                  
Sbjct: 150 MRSREFLMKDAYSFHASEECLDNEFENMKAAYTRIFERCGLKFRSVEADSGAIGGSGSQE 209

Query: 179 LEKIGLHGDDKLNERLIVLRAID--------KLDKFGLQGVKLLLGEGRT-DNSGDFTKG 229
              +   G+D++        A +         + ++  + ++  L +        D  + 
Sbjct: 210 FHVLAESGEDEIIYCDSCGYAANLEKAESVAFIPEYEKELLQAELLDTPNISKIEDIAEH 269

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMH------------ELYELVKGTIAG---EKGFNELVV 274
             + + Q    + F  I  EK               +L  L+  +      +    +L +
Sbjct: 270 LGIETSQTVKAIMFKDIGSEKVYMVLMRGDYEINEVKLKNLLNASELLMLTDSELEDLNL 329

Query: 275 ISELVRKSGYNSNRIK----------------ISSTIVRGLEYYTGCVYEAILGFPVMNE 318
               +     +++ I                  +      +    G  YEA +   +   
Sbjct: 330 KKGYMGPYNLDADNIFLVADETVLKIVNHTAGGNKMDTHYINVNYGRDYEADIIGDIRTV 389

Query: 319 KQKPVVFGSV-----------------------GGGGRYDGLVSRFKGQNVPATGFSIGI 355
           K+                                    +  +  +     +   G  +  
Sbjct: 390 KKDEGCPRCSGTLSSARGIETGHVFKLGTKYSESMKATFLDVNGKSNVMMMGCYGIGVSR 449

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           +      ++ + +           +  +      + D ++  +     L  AGI   +  
Sbjct: 450 TTAAAIEQNYDENGIIWPSAIAPYVVDVVPANMKNKDQVALGEKIYTELLEAGIDTVLDD 509

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            + +  G + K AD    P  ++ G    + G+++IK    G+ L               
Sbjct: 510 RNER-PGFKFKDADLIGFPFKVVSGKQ-AAEGIIEIKIRKTGETLD-------------- 553

Query: 472 AQITIPISELVSTVKKILQE 491
               +   E+V+T+K+++++
Sbjct: 554 ----VKSEEVVTTIKELMKK 569


>gi|254294083|ref|YP_003060106.1| prolyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042614|gb|ACT59409.1| prolyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 441

 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 59/461 (12%), Positives = 125/461 (27%), Gaps = 64/461 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  +I + +R      G   +  P ++ +D L K     D  
Sbjct: 31  MVKQTGSGIYTWLPLGLRVLKKIENIVREEQNRAGAIELLMPTIQPAD-LWKESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            K +  + D   + +       ++   + R   +++  +      Y I   FR+E     
Sbjct: 90  GKEMLRITDRHDREMLFGPTNEEVITDIFRSYVKSYKQLP--LNLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S                   +             R  L  +     
Sbjct: 148 GVMRGREFLMKDAYSFDVNEVEARKSYYKMFCAYLNTFS---------RMGLKAV----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      ++   G    D S +F   A     ++      
Sbjct: 194 --------------------------PMRADTGPIGGDLSHEFIILAETGESEVFCDAEL 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +++       +    + G    EK         E+  ++ + S   +      RG+E   
Sbjct: 228 VNMPPPGLDLDFDSDLLG--EFEKRTQYYAATEEMHDQTKFESEVPEERRVSARGIEVGH 285

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +      P+  +   P    +    G Y   VSR  G  + A               
Sbjct: 286 IFNFGTKYSEPMKAKVMTPEGKEAPVHMGSYGVGVSRLLGAIIEACH------------D 333

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                           +  +    ++  K        LR  G+         +  G +L 
Sbjct: 334 DKGVIWPEEVAPFKSAVVNLRQGDEACDKACEDVYAKLRATGLDPMYDDRDDR-PGAKLS 392

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKG--KELSREIK 461
             +    P AI+ G      G++++KD   G  +E+S +  
Sbjct: 393 TLELIGIPKAIVIGPRGLKNGVVEVKDRISGVTEEMSLDAA 433


>gi|297527450|ref|YP_003669474.1| threonyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297256366|gb|ADI32575.1| threonyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 614

 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/378 (8%), Positives = 83/378 (21%), Gaps = 5/378 (1%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +                +            +     +    S +       +     L  
Sbjct: 216 HMRYGPHAVVIMDSIMQYSWNVVRSLGIPVYRVMGTNMFNLSEKPVLEHALLFGDR-LYE 274

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQ---GVKLL 214
           + +    + +          +L    +   +       V  +     +  L     ++  
Sbjct: 275 LKVDNEKFVLRYAACHQQFAMLRDWIISYKNLPFGMFEVADSYRLEQRGELNLCFRLRKF 334

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
                   + D  +   ++    D ++  ++    K +                  E V 
Sbjct: 335 YMPDLHILNKDLDEAIKMSRIVQDKILEEIAKIGRKYVALYNVTSDFFEKHRDVLIEFVR 394

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
                       + I      V             I  F +     K          G  
Sbjct: 395 RENYPVLVSVIPSGIYYWVLNVEYHIIDNLNRPREIATFQIDIGNGKRFNITYTDEKGEK 454

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
              V            F   I      ++    +      + PV +  +   +  L   +
Sbjct: 455 HHPVIIHTAIIGGIERFIYTIFDTAALMEREGKTPYIPTWLAPVQVRIIPIKNKYLDYAE 514

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + +  AG R ++     ++ G +++ A R   P  ++ G  E     + ++      
Sbjct: 515 KVAEKIENAGFRVDID-DRGESLGKKIRDAGREWIPYIVVIGEREVKSNTINVRIRRTND 573

Query: 455 ELSREIKNNESWREARVA 472
           +            E    
Sbjct: 574 QKVMVTDELIRILEEETK 591


>gi|326389094|ref|ZP_08210676.1| tRNA synthetase, class II (G, H, P and S) [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326206694|gb|EGD57529.1| tRNA synthetase, class II (G, H, P and S) [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 372

 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 3/150 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D   +E     R++ +I  +   +G+D +  P++E+ ++L   +      ++ +
Sbjct: 9   LPEGLEDRLPREAATTTRVMRAIHGVMHAHGYDRVLPPMIEFDETLAHRMAG--IRSRRM 66

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D    + + +R D T  ++R  A        P R    G V      G    R+ +
Sbjct: 67  FRFVDPQSLRMLMMRGDHTPQISRIAASRLAGAPRPLRLCYGGQVLLIRGDGLDPAREKL 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           QC  + +G     A +E+  +  + ++A G
Sbjct: 127 QCGAELIGVDNVAAASEIVALAIEAVQAAG 156


>gi|212535622|ref|XP_002147967.1| protein kinase (Gcn2), putative [Penicillium marneffei ATCC 18224]
 gi|210070366|gb|EEA24456.1| protein kinase (Gcn2), putative [Penicillium marneffei ATCC 18224]
          Length = 1585

 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 79/496 (15%), Positives = 155/496 (31%), Gaps = 68/496 (13%)

Query: 10   ELPRGFADCP----------TKEIRIRNRILDSIRNIYENYGFDPIET---PLLEYSDSL 56
            + P+ F D            + E+ I   + + +  I+  +G   +ET   P+       
Sbjct: 967  QSPKKFEDLTWDMDSRGNPGSNEMLISGLVKEKLIQIFRRHGA--VETTRQPVF------ 1018

Query: 57   GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAEN--FDTIVFPCRTYRIGPV 114
                P       GV  L D  G  + L +DLT P AR +          F          
Sbjct: 1019 ----PRSGHYQNGVVKLLDTSGNILQLPFDLTLPNARSIPRQDPSLEKTFSFGRVYRESP 1074

Query: 115  FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
               E          I        +  E    ++   + +T   +          IN+  +
Sbjct: 1075 HGGEPKSHREADFDIVSYNTLDLALKEAEVIKVLDEIIETFPVLRSVP--MCFHINHSDL 1132

Query: 175  LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
            L  I+E   +        + I+ R    + K+ +  ++  L           +    + S
Sbjct: 1133 LQLIMEFCRITAAQIPVTKEILSRL--NVGKWTMPKIRSELR----------SPTIGVAS 1180

Query: 235  EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
              +D +  F   D    + +  +++   + G +  + L  I   ++      +   +   
Sbjct: 1181 TSLDDLARFDFRDTPDKVQQKLQMI---MEGTEFADRLPPIFARIKSLVSFISGFDVKRK 1237

Query: 295  -IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR------FKGQNVP 347
              V  L       +   + F  + + ++  VF     GGRYD L+        +      
Sbjct: 1238 VYVNPLASLNDKFFRGSILFQCLFDGKRRDVF---AAGGRYDQLIQEFSPKLLYSRSQAH 1294

Query: 348  ATGFSIGISRLIVALKS-----------LESSTNNIKEMGPVLITTMDHDSD-SLSKYQM 395
            A GF++   RL  ++              E+            +     D     +    
Sbjct: 1295 AVGFNLSWDRLSSSMIDHIKNSAKTFTKHEAEVEGFWRSRRCDVLVASFDPTVLRTVGVR 1354

Query: 396  YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
              Q L    I AE+ + +S +F   + +    N    ++       RG L+I+ L K +E
Sbjct: 1355 IVQDLWAHDIIAELAVDAS-SFEELISHYKEDNHSWVVLVKADSNERG-LKIRSLVKKEE 1412

Query: 456  LSREIKNNESWREARV 471
            +     +   W  A +
Sbjct: 1413 IDVRASDLVPWLRAEI 1428


>gi|154251055|ref|YP_001411879.1| ATP phosphoribosyltransferase regulatory subunit [Parvibaculum
           lavamentivorans DS-1]
 gi|154155005|gb|ABS62222.1| Histidine--tRNA ligase [Parvibaculum lavamentivorans DS-1]
          Length = 392

 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 148/395 (37%), Gaps = 62/395 (15%)

Query: 20  TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
            + +R R  +  ++R  +E  G+ P+  P+++ +D       ++ R  + ++   D  G+
Sbjct: 11  GEGLRAREALAVAVRAGFEGAGYAPVSAPVMQPADIFLDMSGEDIR--RRMYVFADPAGE 68

Query: 80  WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-GS 138
            + LR +LT P+ R   E       P +   +G V+R ++ G  + R+F Q  ++ +  +
Sbjct: 69  ELCLRPELTIPVCRLYLE---GAGGPKKLCSVGAVYRYQQKGSAKLREFTQAGLECLDAA 125

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
            AE ADAE+  + A  L   G+K  +Y I I +  + D +++ + L    +   +    R
Sbjct: 126 DAEAADAEVISLAARALADAGLK--NYEIEIGDLALFDALVDALDLPPGWRSRLKRHFWR 183

Query: 199 AIDKLD-----------------KFGLQGVKLLLGEGRTDNSGDFTKGANLT-------S 234
                +                 +  +  +  L  E   D   D  K A +         
Sbjct: 184 PDYFRELLARLAAGDAGDETGDKQALISALAGLDEERAKDVIEDVLKLAGIAPVGGRTVE 243

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTI----------------------AGEKGFNEL 272
           E  + ++    +          EL+ G +                      + +      
Sbjct: 244 EVAERLLEQAELASSSVPRAAAELISGFLAVSGTPKECIARIKALTGGAGVSIDAAIARF 303

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               EL  K+G + +R   ++   R + YYTG V+E  +    ++          + GGG
Sbjct: 304 ERRMELTAKAGLDLSRAHFATGFGRNMAYYTGFVFEFRVAALGVDA--------MICGGG 355

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           RYD L+S     +             ++A  + E+
Sbjct: 356 RYDDLLSALGAASPVPAVGCAVGIERLLAAVAKEA 390


>gi|313896347|ref|ZP_07829900.1| proline--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975146|gb|EFR40608.1| proline--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 570

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 59/515 (11%), Positives = 120/515 (23%), Gaps = 76/515 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I   IR   +  G   I  P+L+ ++ L +           +  +
Sbjct: 38  GMYTYLPLAWRTLRKIEQIIREEMDAAGGQEIMMPILQPAE-LWEESGRWGAYGAEMMRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR------IGPVFRNEKHGPGR 124
           QD   +   L     ++   L R    ++  +       +        P F   +     
Sbjct: 97  QDRHERAFCLGPTHEEMITALVRDELRSYKQLPVMLYQIQDKFRDERRPRFGVMRSREFI 156

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            +     D D  G                T   +  +  +   G       +        
Sbjct: 157 MQDLYSFDKDVEGMHESYRKMYEAYTNVFTRCGLNFRAVEADCGAIGGGRSEEFTVLAPE 216

Query: 185 HGDDKLNERLIVLRAIDKLDKFG----LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                         A D+  +          +L L +  T ++      A      ++  
Sbjct: 217 GESRIACCDACSYAASDEKAQLRPLDAPDEAELPLEKVSTPHTSTIALLAEFLKIPVEKT 276

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGE-------KGFNELVVISE-LVRKSGYNSNRIKIS 292
           +  ++   E+ +  L  L       E        G  EL +  E  +R +G     +   
Sbjct: 277 IKAVAYQTEEDVLVLAFLRGDHEVNEVKLANAVPGARELRMADEAAIRAAGECPGFMSPI 336

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKP-----------------------VVFGSVG 329
                                   NE+                                 
Sbjct: 337 GIKEGTHIVVDETAMRMKNAVSGANEQDYHYTNVNPVRDFAHVTVADIRLVAEGDLCPAC 396

Query: 330 GGGRYD--------------------------GLVSRFKGQNVPATGFSIGISRLIVALK 363
           G G                              +  + K   +   G  +G +      +
Sbjct: 397 GEGHLHISRGIEAGQIFALGTKYSEAMQANFLDVDGKLKPLQMGCYGIGVGRTMAAAIEQ 456

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT----QMLRTAGIRAEMFLGSSKNFGN 419
           + +                +   +  + +   Y     + LR AGI   +     +  G 
Sbjct: 457 NHDEHGIIWPRAIAPYEVVVVAVNAKVEEQLAYAEEIYEELRAAGIDVLLDDRRERA-GV 515

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           +    D    P+ I  G      G +++K    G+
Sbjct: 516 KFNDCDLIGYPVRIAIGPKTIENGSIEVKLRRTGE 550


>gi|163856341|ref|YP_001630639.1| ATP phosphoribosyltransferase regulatory subunit [Bordetella petrii
           DSM 12804]
 gi|229822704|sp|A9IK79|HISZ_BORPD RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|163260069|emb|CAP42370.1| ATP phosphoribosyltransferase regulatory subunit [Bordetella
           petrii]
          Length = 385

 Score = 85.7 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 70/395 (17%), Positives = 126/395 (31%), Gaps = 51/395 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + ++Y  YGF+ +  PL+EY DSL      +       
Sbjct: 6   LPESLADVLPAEARRIEELRRELLDLYRTYGFELVAPPLVEYIDSLLSGTGTDLNLR--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + +R D+T  + R  A +        R    G V           R+ +
Sbjct: 64  CKLVDQLSGRTLGVRADMTPQVTRIDA-HLLNRAGVTRLCYCGTVLHARPADLLSSRELL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  ++ DT+ A G+++    +         G++  I       
Sbjct: 123 QIGAEIYGHAGFEADLEILSLVLDTVAAAGLRQPRLDLC------HPGVVRAILDADPAA 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 ++  + + D  GL  +    G  R D +    +   L                 
Sbjct: 177 AAYAEDIVLLLREKDVPGLAELARRDGGIRADTAAALQRLPGL-------------YGGP 223

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +    +          + L  I +           + +    + G  Y++G  +  
Sbjct: 224 DVLQQARHDLPLLPGVAAALDALQAIID-----AMPDVTLGVDLADIGGYGYHSGVTFAL 278

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            ++  GGRYD +   F  +  PATGFS         L   + + 
Sbjct: 279 YAE----------GWHDALVSGGRYDDVSRAFG-RARPATGFS---------LDLRKLAR 318

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                     +        +L+      + LR AG
Sbjct: 319 GLPPAGRARAVRAPWGQDAALAAA---VRQLRRAG 350


>gi|291288325|ref|YP_003505141.1| Histidine--tRNA ligase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885485|gb|ADD69185.1| Histidine--tRNA ligase [Denitrovibrio acetiphilus DSM 12809]
          Length = 374

 Score = 85.7 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 135/400 (33%), Gaps = 57/400 (14%)

Query: 20  TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD-G 78
                  N+I  SI+N    YG+  I  P+ EY D L +     +  ++      D + G
Sbjct: 15  PGRSVKMNKIEHSIKNSVLAYGYMEIFLPVYEYYDILKETT--FNFKDENTIRFIDRNTG 72

Query: 79  QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
           + + LR D T   ARY A        P R    G VFRN     G   + +Q   +  G+
Sbjct: 73  KSLVLRPDFTPQAARYFANYMADFPLPARVCYDGRVFRNVNLNKGIKSEQLQVGAELYGN 132

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
               AD E+ M+       + IK   Y  G                             R
Sbjct: 133 DKLDADTELLMLAKRAFGDLKIKGCKYVFG------------------------HSGFTR 168

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SIDLEKSMHELY 256
              +L          LL     D+      G    S + D  ++FL  +    +++ ++ 
Sbjct: 169 RALELAGDKKTEYHKLLDAKNVDSIKKLITG----SSEADKFLAFLPKAFGGIETIEKII 224

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVM 316
                     +    +  +   +   G++ N +   ++  RGL+YYTG  ++ +      
Sbjct: 225 SSCAFDKELSEHIGYIRSLFRNLISLGFDKNDLIFDASESRGLDYYTGITFDILHAEVGE 284

Query: 317 NEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG 376
           N          + GGGRYD L   F  ++VPA G           ++ +     +  ++ 
Sbjct: 285 N----------LAGGGRYDNLTKNFG-RDVPACGVVFN-------IEEIYRVDKSDIKLK 326

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
            +    +  ++ + S+       LR  G          K 
Sbjct: 327 EIDWLVVGKENFAKSE------HLRGEGYTVFYAGDEQKK 360


>gi|313679268|ref|YP_004057007.1| ATP phosphoribosyltransferase regulatory subunit [Oceanithermus
           profundus DSM 14977]
 gi|313151983|gb|ADR35834.1| ATP phosphoribosyltransferase regulatory subunit [Oceanithermus
           profundus DSM 14977]
          Length = 377

 Score = 85.7 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G       E + R ++    R ++  +G+ P+E P LE  D             +  
Sbjct: 13  IPEGTRYYLPPEAQARLQLTARWRELFAAWGYAPVELPALEIFDP-------AHPLAERA 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           F L D  G+ ++LR + T  L R  A+  D    P R    G ++  +
Sbjct: 66  FKLVDKSGRVLALRSEFTTALVRM-AQTQDLGPAPQRLQYAGRLWLRD 112


>gi|307105988|gb|EFN54235.1| hypothetical protein CHLNCDRAFT_135753 [Chlorella variabilis]
          Length = 1563

 Score = 85.7 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/507 (12%), Positives = 152/507 (29%), Gaps = 73/507 (14%)

Query: 20   TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
              ++ +R+ +L  +++ +E +G   +       S  LG    ++     G   L    G 
Sbjct: 1021 PVQMAVRDHVLSVLKDCFERHGAVGMC------SQELGLSSGEDPP---GAVQLLTPTGA 1071

Query: 80   WISLRYDLTAPLARYVAENFDTIVFPCR------TYRIGPVFRNEKHGPGRFRQFIQCDV 133
             ++LR++L      +  +                        +    G G  R F+Q D+
Sbjct: 1072 KLALRWELRQAFVAWFVQQLAAAGGGGSLLLDGLRRYEVAAVQRHAAGQGLPRSFLQADL 1131

Query: 134  DNVGSSAE-------------TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
            D V                   A   +     + L  +  +  D  + + +R + +  L 
Sbjct: 1132 DFVLPGDRTPAELLLGDAEVGWAGVRVITCTHEALAEL-PECGDVEVRLGHRSLFELSLA 1190

Query: 181  KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             +G+  + + +   ++  A           +       R  +     +G  L++E I   
Sbjct: 1191 FVGVSREARGSVIQLLSTAS------AASPLHATARSKRWPSIKAGLEGIGLSAEAIGRC 1244

Query: 241  VSFL---SIDLEKSMHELYELVK-------------------GTIAGEKGFNELVVISEL 278
               +   + + E ++  L  ++                     T A     +EL  + + 
Sbjct: 1245 RQLVLQAAGEAEAALFRLRTMLAHTAAGRQHGGGQRSGPRPHSTTAALACLDELQSLLQY 1304

Query: 279  VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG------GG 332
            ++  G     + +   +    E ++G +++  L              G            
Sbjct: 1305 LQAWGVPQCSLLVDPLLAPHSEAFSGALFQCHLVQGASGATAVVAAGGRYDSLLKASWAR 1364

Query: 333  RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI--------KEMGPVLITTMD 384
            +     +      + A G ++   RL+   +     +             +    +    
Sbjct: 1365 QSALSGTVASMPPLHAVGVTLNADRLVAVAQGSSRWSTPGSPAPVAGLPRLSQADVLVCS 1424

Query: 385  -HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS-R 442
                  L +     + L  AG+ AEM   ++ +   Q +YA  R  P  +I         
Sbjct: 1425 RGGGGLLKERMALARSLWDAGLAAEMLPQAAPSLTEQYEYAQSRGIPWLVIINANTFEAA 1484

Query: 443  GMLQIKDLAKGKELSREIKNNESWREA 469
              +++K +    E    +    ++  A
Sbjct: 1485 DTVRVKAMNARLEEDVSVSELPTYLLA 1511


>gi|261364655|ref|ZP_05977538.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria mucosa
           ATCC 25996]
 gi|288567257|gb|EFC88817.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria mucosa
           ATCC 25996]
          Length = 383

 Score = 85.7 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 72/407 (17%), Positives = 141/407 (34%), Gaps = 49/407 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EYS SL   + D     K 
Sbjct: 5   QLPEHVADVLPTNARQLESAREQLLTLFRVHGYELVQPPLMEYSHSLLTHI-DAGLSLKT 63

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  +    G+ + +R D+T  +AR  A          R    GPV      G    R+ +
Sbjct: 64  ILVVDQLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHARPEGLLNMREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M  +++   +   +  + + +  +   + +   L+    
Sbjct: 124 QAGAEMYGFADIRADIELIDLMLKSMKIADM--GEVLLSLGHIGVFRALSDAAHLNAQQS 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                ++            + V+  +   + D               +  +         
Sbjct: 182 KTLLALM-------QNKDTEAVEAQVKAWKLDGMWAKAFSL------LPRL-----YGGR 223

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +    E +    A     +EL  + +      + + ++ I  + +R   Y+TG +Y A
Sbjct: 224 EVLSAARERLPDLSAVGSALDELQAVCD-----AFPNQKVHIDLSELRVDNYHTGLLYAA 278

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            +V  GGRYDGL   F  +  PATGFS  +   I  L ++E   
Sbjct: 279 YGSN----------FHDAVARGGRYDGLGEYFG-RARPATGFSFDLRSFIGRLPAIERQP 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                        +  D+      +   + LR  G    +  G   N
Sbjct: 328 ------------VVLVDAGDAEAAREAVEALREQGQCVVIDYGIGHN 362


>gi|126465876|ref|YP_001040985.1| threonyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|166225505|sp|A3DN67|SYT_STAMF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126014699|gb|ABN70077.1| threonyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 614

 Score = 85.3 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/378 (8%), Positives = 84/378 (22%), Gaps = 5/378 (1%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +                +            +     +    S +       +     L  
Sbjct: 216 HMRYGPHAVIIMESIMQYSWNIVRSLGIPVYKVMGTNMFNLSEKPVLEHALLFGDR-LYE 274

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQ---GVKLL 214
           + +    + +          +L    +   +       V  +     +  L     ++  
Sbjct: 275 LKVDNEKFVLRYAACHQQFAMLRDWIISYKNLPFGMFEVADSYRLEQRGELNLCFRLRKF 334

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
                   + D  +   ++    D ++  ++    K +                  E V 
Sbjct: 335 YMPDLHILNRDLNEAIKISRIVQDKILEEIAKIGRKYVALYNVTSDFFDKYRDILIEFVR 394

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
                       + I      V             I  F +     +          G  
Sbjct: 395 RENYPVLVSVIPSGIYYWVLNVEYHIIDNLNRPREIATFQIDIGNGERFNITYTDEKGEK 454

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
              V            F   I      ++    +      + PV +  +   ++ L   +
Sbjct: 455 HHPVIIHTAIIGGIERFIYTIFDTAALMEKEGKTPYIPTWLAPVQVRIIPIKNEYLDYAE 514

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + +  AG R ++     ++ G +++ A R   P  ++ G  E     + ++      
Sbjct: 515 KVAEKIENAGFRVDID-DRGESLGKKIRDAGREWIPYIVVIGEREVRSNTINVRIRRTND 573

Query: 455 ELSREIKNNESWREARVA 472
           +            E    
Sbjct: 574 QKVMVTDELIRILEEETK 591


>gi|169796614|ref|YP_001714407.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii AYE]
 gi|184157476|ref|YP_001845815.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii ACICU]
 gi|213156274|ref|YP_002318694.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii AB0057]
 gi|215484075|ref|YP_002326300.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii AB307-0294]
 gi|260557544|ref|ZP_05829759.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           baumannii ATCC 19606]
 gi|301346309|ref|ZP_07227050.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii AB056]
 gi|301510216|ref|ZP_07235453.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii AB058]
 gi|301596475|ref|ZP_07241483.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii AB059]
 gi|332853554|ref|ZP_08434818.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           baumannii 6013150]
 gi|332868419|ref|ZP_08438150.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           baumannii 6013113]
 gi|332875048|ref|ZP_08442887.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           baumannii 6014059]
 gi|226702192|sp|B7GWX1|HISZ_ACIB3 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|226702193|sp|B7IAF3|HISZ_ACIB5 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|229890099|sp|B2HWK9|HISZ_ACIBC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|229890101|sp|B0VAI1|HISZ_ACIBY RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|169149541|emb|CAM87430.1| ATP phosphoribosyltransferase [Acinetobacter baumannii AYE]
 gi|183209070|gb|ACC56468.1| ATP phosphoribosyltransferase [Acinetobacter baumannii ACICU]
 gi|213055434|gb|ACJ40336.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii AB0057]
 gi|213986320|gb|ACJ56619.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii AB307-0294]
 gi|260409170|gb|EEX02473.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           baumannii ATCC 19606]
 gi|322507791|gb|ADX03245.1| hisZ [Acinetobacter baumannii 1656-2]
 gi|323517391|gb|ADX91772.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii TCDC-AB0715]
 gi|332728587|gb|EGJ59959.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           baumannii 6013150]
 gi|332733418|gb|EGJ64601.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           baumannii 6013113]
 gi|332736748|gb|EGJ67736.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           baumannii 6014059]
          Length = 388

 Score = 85.3 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 81/423 (19%), Positives = 148/423 (34%), Gaps = 60/423 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++  ++     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVIEKLRREAIDFLAVRGYQLVYTPFIEYIESLSSLSESNQDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   +    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGIRADMTPQVARIDA-HVRPVEGVARYCYAGTVLHTKPQNFNATRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   +E     +   H+ + +  +   +++  GL  +++
Sbjct: 128 QLGAELYGHDSIEADVEMVDVMLGLIENAYTLQG-AHLDLGHVGLFRSLVKYAGLSKNEE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    +  N G         +  +D + + LS D+ 
Sbjct: 187 HELSDLYQR----------KALPELAEFTQNLNMGSDFYALGRYASDLDALQAHLSADIL 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K       L           N L    E ++   + +  + I    +R   Y+TG +Y  
Sbjct: 237 KDAEFDAAL-----------NALKTTLEQIKNR-WPALNVGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  +  PATGFS         L +L +  
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSCD-------LYALGA-- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            N       ++     ++D L          R+ G+R    LG+           D  + 
Sbjct: 325 -NQFAEIETVVAPKGTEADLLKA---IANA-RSEGLRVVQLLGND----------DLSSI 369

Query: 430 PLA 432
           P A
Sbjct: 370 PYA 372


>gi|257065041|ref|YP_003144713.1| prolyl-tRNA synthetase, family II [Slackia heliotrinireducens DSM
           20476]
 gi|256792694|gb|ACV23364.1| prolyl-tRNA synthetase, family II [Slackia heliotrinireducens DSM
           20476]
          Length = 570

 Score = 85.3 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 57/525 (10%), Positives = 138/525 (26%), Gaps = 72/525 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  +I + +R   +++G + +  P ++ +D L +         + + ++
Sbjct: 47  GLYSFLPLGLRVLRKIENIVREEMDSHGGEELLMPFVQSAD-LWRQSGRWGAYGEEMMTM 105

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D       L     ++   L +    ++  +       +        +   G  R    
Sbjct: 106 RDRHDNEFCLGPTAEEVITDLVKNELRSYKDLPKNLYHIQ-LKFRDERRPRFGLLRSREF 164

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD------GILEKIGL 184
              D      +    E+   +     +   +R      I      +           +  
Sbjct: 165 IMKDAYSFDKDQEGLEVNYQLMRDAYSRMCERMGMEYRIVQADPGEIGGNGTEEFMTLAE 224

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQG---VKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
            G+ +L        A  ++ +        V   + +  T       + A+    + D  V
Sbjct: 225 TGEAELVYCDCGYAADVEVGECHPNPVGYVGDTMEKIATPGLHTIEELADFLGIEADGTV 284

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST------- 294
              S   ++    +  +       E     +V   E +         +   S        
Sbjct: 285 KAFSGKDKEGAIWVLFVPGNYEVNEDKAAHVVRGFEPLTDEEMKDAGLVKGSMGPVGLPE 344

Query: 295 IVRGLEYYTGCVYE-AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---- 349
            VR     +    E  I+G             G       +  L +   G   P      
Sbjct: 345 GVRICADDSLRDVERWIVGANEEGYHLLGAKQGEDFTVDAWGDLCTVVAGDACPCCGKPL 404

Query: 350 ---------------------------------------GFSIGISRLIVALKSL----- 365
                                                   + +G+SR + A         
Sbjct: 405 QAARGIEVGQIFKLGTKYSEAMGALFMDEDGTEKPFIMGCYGVGVSRCMAAAVEQSHDDM 464

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                       V +  +    D +++        L  AG+   +     +  G +    
Sbjct: 465 GIIWPVGIAPAHVAVIPLSTKPDEVTEAAEDVAAKLAAAGLEVCIDDRDERA-GVKFADN 523

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           D    P  ++ G    + G +++K+   G++    + +  S+ E+
Sbjct: 524 DLIGWPAQVVIGKRGLAAGTVEVKNRKTGEKTDVAVDDVVSFVES 568


>gi|312875845|ref|ZP_07735835.1| Histidine--tRNA ligase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797326|gb|EFR13665.1| Histidine--tRNA ligase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 393

 Score = 85.3 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 116/342 (33%), Gaps = 50/342 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK          F D           + +    +++ +G+  IE    E  +      
Sbjct: 1   MSKK----------FVDYYPPVSDTLEEVRERTIFLFKKFGYRLIEPSTFEDYEKSKSLN 50

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                         D DG  ++LR + T  +A  +A  F T V+P +    G  ++  + 
Sbjct: 51  GSNTI------KFMDSDGTVVALRNEFTPKVA-EIAAKFQTNVYPLKLCYFGKAYQFLQQ 103

Query: 121 GPGRFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
             G  R+F Q  ++N  +S       E+ ++  ++L  +G+  N++ I +       GI 
Sbjct: 104 EAGDLREFFQAGIENFHTSDSFYIDLEVLVLAVESLLELGV--NNFTIDVGEVNFFKGIA 161

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +   +                        + +  L+ +       +F     ++ + ID+
Sbjct: 162 KDCEIDE-------------------TSSEVLCKLVDKKDYIGIENFLIRKGISQKVIDV 202

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
             S   +   +   +  +        +     L  I   + K GY  N I I   +V+ L
Sbjct: 203 FRSLTRLYGREDKIKEAKKFANNEISKLAIERLSEIYNNMVKLGY-QNYITIDFGMVKHL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            YYTG ++   L                V  GGRYD L   F
Sbjct: 262 NYYTGIIFSGYLQKLGY----------PVLNGGRYDNLCEIF 293


>gi|225849769|ref|YP_002730003.1| prolyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|254782911|sp|C0QTI8|SYP_PERMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225645347|gb|ACO03533.1| prolyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 563

 Score = 85.3 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 72/531 (13%), Positives = 143/531 (26%), Gaps = 75/531 (14%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G  +      R+  +I   IR   ++ G   +  P+L  ++ L +     D   K 
Sbjct: 34  QLAAGLYEYLPLGFRVLKKIEGIIRKYMDDAGALEVLLPILAPAE-LWQETGRWDVYGKE 92

Query: 70  VFSLQDDDGQWISLRY--DLTAP-LARYVAENFDTIVFPCRTYRIGP----VFRNEKHGP 122
           +F ++D  G++ +L    + T   L R    ++  +       +         R      
Sbjct: 93  LFRVEDRKGRFFALGPTHEETITDLVRKNIRSYKDLPKNFYQIQTKFRDEARPRYGLIRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG----------------------- 159
             F        D     A  +   M        + +G                       
Sbjct: 153 REFIMKDAYSFDISEEMAVKSYEIMKEAYKKIFDELGLDYLMVEADVGAIGGKYSHEFVV 212

Query: 160 -IKRNDYHIGINNRKILDGILE--KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
            +   + HI   +       +E  K     D    E    L  +       ++ V   L 
Sbjct: 213 KVPNGEAHIVFCDNCGYAANVEAAKYEFELDKLPPEDEKPLEKVHTPGVSSVEDVSRFLD 272

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN----EL 272
             +           +  +    ++     ++  K ++    L     + E+  +    E 
Sbjct: 273 INQKKIVKTLVYILDDGTAVAVLIRGDRELNETKLINYFKALDCHLASSEELKDLGIVEG 332

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG-------------------- 312
            V    +    Y    +K     V G            +                     
Sbjct: 333 FVGPMGLDIPVYADISVKDLHNFVVGANEEDYHYINVNIPRDFKPVDFVDFSTAREGDPC 392

Query: 313 ---FPVMNEKQKPVVFGSVGGGGRYDG----LVSRFKGQNVPATGFSIGISRLIVALKSL 365
                 +NE     V      G +Y            G+  P      GI    +   ++
Sbjct: 393 PVCKKPLNETTGLEVGHIFLLGTKYSEALKAYFVDKDGREKPIVMGCYGIGVSRLMAAAV 452

Query: 366 ESSTNNIKEMGPVLITTM--------DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           E S +    + P  I             D    +  +      +  GI   +F     + 
Sbjct: 453 EQSHDENGIIWPENIAPFKLHILALNIKDDQIKTVAEDIYTKAKEKGIEV-LFDDRDISP 511

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           G + K AD    P  I+ G      G ++I+    GK+   +I   +++ +
Sbjct: 512 GAKFKDADLIGIPYRIVVG-RGVKNGKVEIQTRKDGKKEEIDINEIDNFLD 561


>gi|239503496|ref|ZP_04662806.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii AB900]
          Length = 388

 Score = 85.3 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 81/423 (19%), Positives = 148/423 (34%), Gaps = 60/423 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++  ++     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVIEKLRREAIDFLAVRGYQLVYTPFIEYIESLSSLSESNQDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   +    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGIRADMTPQVARIDA-HVRPVEGVARYCYAGTVLHTKPQNFNATRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   +E     +   H+ + +  +   +++  GL  +++
Sbjct: 128 QLGAELYGHDSIEADVEMVDVMLGLIENAYTLQG-AHLDLGHVGLFRSLVKYAGLSKNEE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    +  N G         +  +D + + LS D+ 
Sbjct: 187 HELSDLYQR----------KALPELAEFTQNLNMGSDFYALGRYASDLDALQAHLSADIL 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K       L           N L    E ++   + +  + I    +R   Y+TG +Y  
Sbjct: 237 KDTEFDAAL-----------NALKTTLEQIKNR-WPALNVGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  +  PATGFS         L +L +  
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSCD-------LYALGA-- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            N       ++     ++D L          R+ G+R    LG+           D  + 
Sbjct: 325 -NQFAEIETVVAPKGTEADLLKA---IANA-RSEGLRVVQLLGND----------DLSSI 369

Query: 430 PLA 432
           P A
Sbjct: 370 PYA 372


>gi|224826458|ref|ZP_03699560.1| tRNA synthetase class II (G H P and S) [Lutiella nitroferrum 2002]
 gi|224601559|gb|EEG07740.1| tRNA synthetase class II (G H P and S) [Lutiella nitroferrum 2002]
          Length = 383

 Score = 84.9 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 70/358 (19%), Positives = 119/358 (33%), Gaps = 40/358 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD      R       ++  ++   G++ +  PL+EY+D+L              
Sbjct: 6   LPEHIADILPATARQVESAKAAMLELFRTAGYELVLPPLIEYADALVSEGDSALDIK--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A          R    G V      G    R+ +
Sbjct: 64  FKLDDHLSGRQLGLRADITPQVARIDAHLLSNRTGVTRLCYAGSVVHARPSGLMSSREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M  TL  VG+ +    +         G +          
Sbjct: 124 QVGAELYGYAGIEADLEIIELMLATLRQVGVDKLRLDV---------GHIAIFRGLAAAA 174

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                        L    +  V+ L+ E        F     L                 
Sbjct: 175 GLAAEETRELFGALQSKDIATVRELVAEVAEPYKSAFLALPEL-------------YGPR 221

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + + +    +      E G  +L  I+  +         +      +RG  Y+TG ++ A
Sbjct: 222 QVLDKARTRLPSLPEVELGLMQLTAIANALD----GQVELSFDLAELRGDFYHTGLMFAA 277

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                       P    ++  GGRYD +  +F  +  PATGFS+ +  L+  L   ++
Sbjct: 278 YA----------PGWSEALARGGRYDNVGRKFG-RARPATGFSLDLRDLVRILPERDA 324


>gi|218297228|ref|ZP_03497884.1| histidyl-tRNA synthetase 2 [Thermus aquaticus Y51MC23]
 gi|218242421|gb|EED08961.1| histidyl-tRNA synthetase 2 [Thermus aquaticus Y51MC23]
          Length = 359

 Score = 84.9 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 114/301 (37%), Gaps = 36/301 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G       E R++  ++  +++++  +G++P+E P LE  D        +    +  
Sbjct: 2   IPEGTRFLLPPEARLKAEVVGRLQDLFYRHGYEPVELPALEAYDP-------QHPLAERA 54

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           F L D  G+ ++LR + T  L++ +       V   +      +   +    GR R++ Q
Sbjct: 55  FKLVDRTGEVLALRSEFTTLLSKLLRPLLGEGVRRFQYAGALWLREADA-ELGRLREYTQ 113

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ +G++   ADAE+  +    LEA+G+   +  + +    ++   L+  GL  + K 
Sbjct: 114 VGLELIGATGPLADAEVLELAFAALEALGV---EGVVEVGLPSLVGEALKASGLPEEAKK 170

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
             +  + R                                 ++ E    +++   +  EK
Sbjct: 171 EAQRAIHR-------------------KNLPELKALLDRHPVSPETKKTLLTLPDLYGEK 211

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E  E +       +    L    EL+ +       + +   + R  +YY+G  + A 
Sbjct: 212 EVLEEAEALPLPERAREALRGLRQTLELLER------PVLLDLGMARRYQYYSGIFFRAY 265

Query: 311 L 311
            
Sbjct: 266 T 266


>gi|222834480|gb|EEE72957.1| predicted protein [Populus trichocarpa]
          Length = 147

 Score = 84.9 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 50/143 (34%), Gaps = 4/143 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD    E R    +   + +    YG++ +  P+LEY +SL     +        
Sbjct: 6   LPDHIADVLPSEARHIEELRRGLLDTARGYGYELVMPPMLEYLESLLTGTGEALDL--QT 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             L D   G+ + LR D T  +AR  A +        R    GPV       P   R+ +
Sbjct: 64  CKLIDQLTGRTMGLRADTTQQVARIDA-HLLNRKGLTRLCYCGPVVHARPDRPRATREPL 122

Query: 130 QCDVDNVGSSAETADAEMCMMMA 152
           Q    +  S +       C    
Sbjct: 123 QFAQASPTSMSIWPMCASCAACW 145


>gi|163794490|ref|ZP_02188461.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
           [alpha proteobacterium BAL199]
 gi|159180214|gb|EDP64737.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
           [alpha proteobacterium BAL199]
          Length = 391

 Score = 84.9 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/311 (18%), Positives = 113/311 (36%), Gaps = 18/311 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D          R+++ +      +G++ ++ PL+E+  SL +        +  V
Sbjct: 14  LPAGLRDILPPSAGNEARLIELLVARTVAHGYERVKPPLIEFETSLLEGPG--AATSDRV 71

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D    + + +R D+T  +AR  +        P R    G V R         R+ +
Sbjct: 72  FRLMDPMSQRMMGVRADMTVQVARIASTRLKNAPRPLRLCYSGEVLRTVADQLNPEREMV 131

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   + +GS+   ADAE+ ++  +TL + G+K     + +    ++  +L ++ L   D 
Sbjct: 132 QVGAELIGSATAEADAEIILVGIETLRSAGVKGLSVDLMV--PPLVPAVLAEVVLPSSDL 189

Query: 190 LNERLIVLRAIDKLDKFGLQGV---------KLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              R     AID+ D   ++ +         +LL   G  D +     G +L  +    +
Sbjct: 190 ARLRA----AIDRKDIAAVEALGGAVAPVLTRLLAATGPKDAALSALAGIDLPDDARAAL 245

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +    +  E    +       +GF     I+  +   G      +       G  
Sbjct: 246 DRLTHVVDLVAAAEPELAITLDPVENRGFEYHTGIAFSLFARGVRGEMGRGGRYRPNGDP 305

Query: 301 YYTGCVYEAIL 311
             T   +   +
Sbjct: 306 TETATGFTLYM 316


>gi|261856594|ref|YP_003263877.1| tRNA synthetase class II (G H P and S) [Halothiobacillus
           neapolitanus c2]
 gi|261837063|gb|ACX96830.1| tRNA synthetase class II (G H P and S) [Halothiobacillus
           neapolitanus c2]
          Length = 399

 Score = 84.9 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 76/402 (18%), Positives = 146/402 (36%), Gaps = 47/402 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  +   ++ R   ++  ++ + +   G+D +  PL+E+ DSL      +       
Sbjct: 10  LPAGIDELLPEQARRVEQLRTALLHQFHVAGYDLVIPPLVEFVDSLLVGSGRDLAL--DT 67

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             + D   G+ + LR D+T  +AR  A +        R   +G V R    G G  R  +
Sbjct: 68  LQMTDGLTGRQLGLRADMTPQIARIDA-HSMKPEAERRLCYLGTVVRARPDGLGGSRTPM 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +    D E+  +M   L+  G+  +   + + +  +   +    G   +D+
Sbjct: 127 QVGAELYGVAEVEGDLEIISLMLSQLKQAGV--DRIVLDLGHVDVFGELAVAAGFDDEDE 184

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D L +     ++ LL   +                    +++ L+ +  
Sbjct: 185 DI-------ARDALQRKSTADIQSLLAARQIAP----------PLANALTLLTQLNGEWS 227

Query: 250 KSMHELYELVKG--TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + +   ++    T   +   + L +I   +    ++   + I  + + G  Y TG V+
Sbjct: 228 AVLAKANVVLADVMTPGMQSALDRLAIIGSAIE-RNFSQVDVLIDLSELHGYHYQTGLVF 286

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A            P +   +  GGRYD +   F     PATGFS+        ++ L  
Sbjct: 287 AAYA----------PGLGREIARGGRYDDIGEAFG-SARPATGFSLD-------MRELLR 328

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
             +      PV+    D+   +L       + LR  G R  M
Sbjct: 329 FFDGSGVKDPVIYAPADYADAALIAA---VERLRATGRRVVM 367


>gi|169633136|ref|YP_001706872.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           baumannii SDF]
 gi|229890100|sp|B0VL32|HISZ_ACIBS RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|169151928|emb|CAP00782.1| ATP phosphoribosyltransferase [Acinetobacter baumannii]
          Length = 388

 Score = 84.9 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 81/423 (19%), Positives = 148/423 (34%), Gaps = 60/423 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++  ++     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVIEKLRREAIDFLAVRGYQLVYTPFIEYIESLSSLSESNQDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   +    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGIRADMTPQVARIDA-HVRPVEGVARYCYAGTVLHTKPQNFNATRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   +E     +   H+ + +  +   +++  GL  +++
Sbjct: 128 QLGAELYGHDSIEADVEMVYVMLGLIENAYTLQG-AHLDLGHVGLFRSLVKYAGLSKNEE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    +  N G         +  +D +   LS D+ 
Sbjct: 187 HELSDLYQR----------KALPELAEFTQNLNMGSDFYALGRYASDLDALQVHLSADIL 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K       L           N L +  E ++   + +  + I    +R   Y+TG +Y  
Sbjct: 237 KDTEFDAAL-----------NALKITLEQIKNR-WPALNVGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  +  PATGFS         L +L +  
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSCD-------LYALGA-- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            N       ++     ++D L          R+ G+R    LG+           D  + 
Sbjct: 325 -NQFAEIETVVAPKGTEADLLKA---IANA-RSEGLRVVQLLGND----------DLSSI 369

Query: 430 PLA 432
           P A
Sbjct: 370 PYA 372


>gi|255067079|ref|ZP_05318934.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria sicca
           ATCC 29256]
 gi|255048675|gb|EET44139.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria sicca
           ATCC 29256]
          Length = 383

 Score = 84.9 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 76/407 (18%), Positives = 142/407 (34%), Gaps = 49/407 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EYS SL   + D     K 
Sbjct: 5   QLPEHVADVLPTNARQLESAREQLLTLFRVHGYELVQPPLMEYSHSLLTHI-DAGLSLKT 63

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  +    G+ + +R D+T  +AR  A          R    GPV      G    R+ +
Sbjct: 64  ILVVDQLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHARPEGLLNMREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M  +++   +   +  + + +  +   + +   L  +  
Sbjct: 124 QAGAEMYGFADIRADIELIDLMLKSMKIADM--GEVLLSLGHIGVFRALSDAAHLDAEQS 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                ++    DK  +     VK    +G    +                          
Sbjct: 182 ATLLALM---QDKDTEAVEAQVKAWKLDGMWAKAFSLLPRL---------------YGGR 223

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +    E +    A     +EL  + +      + + ++ I  + +R   Y+TG +Y A
Sbjct: 224 EVLSAARERLPDLSAVGSALDELQAVCD-----AFPNQKVHIDLSELRVDNYHTGLLYAA 278

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            +V  GGRYDGL   F  +  PATGFS  +   I  L ++E   
Sbjct: 279 YGSN----------FHDAVARGGRYDGLGEYFG-RARPATGFSFDLRSFIGRLPAIERQP 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                        +  D+D     +   + LR  G    +  G   N
Sbjct: 328 ------------VVLVDADDAEAAREAVEALREQGQCVVVDYGIGHN 362


>gi|312793657|ref|YP_004026580.1| histidine--tRNA ligase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180797|gb|ADQ40967.1| Histidine--tRNA ligase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 393

 Score = 84.9 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 116/342 (33%), Gaps = 50/342 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK          F D           + +    +++ +G+  IE    E  +      
Sbjct: 1   MSKK----------FVDYYPPVSDTLEEVRERTIFLFKKFGYRLIEPSTFEDYEKSKSLN 50

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                         D DG  ++LR + T  +A  +A  F T V+P +    G  ++  + 
Sbjct: 51  GSNTI------KFMDSDGTVVALRNEFTPKVA-EIAAKFQTNVYPLKLCYFGKAYQFLQQ 103

Query: 121 GPGRFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
             G  R+F Q  ++N  +S       E+ ++  ++L  +G+  N++ I +       GI 
Sbjct: 104 EAGDLREFFQAGIENFHTSDSFYIDLEVLVLAVESLLELGV--NNFTIDVGEVNFFKGIA 161

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +   +                        + +  L+ +       +F     ++ + ID+
Sbjct: 162 KDCEIDE-------------------TSSEVLCKLVDKKDYIGIENFLIRKGISQKVIDV 202

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
             S   +   +   +  +        +     L  I   + K GY  N I I   +V+ L
Sbjct: 203 FRSLTRLYGREDKIKEAKKFANNEISKLAIERLSEIYNNMVKLGY-QNYITIDFGMVKHL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            YYTG ++   L                V  GGRYD L   F
Sbjct: 262 NYYTGIIFSGYLQKLGY----------PVLNGGRYDNLCEIF 293


>gi|300728037|ref|ZP_07061411.1| histidyl-tRNA synthetase [Prevotella bryantii B14]
 gi|299774703|gb|EFI71321.1| histidyl-tRNA synthetase [Prevotella bryantii B14]
          Length = 88

 Score = 84.5 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)

Query: 8  RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRP 66
          +  +P+G  D    E+  RN I ++I+ +Y  YGF  IETP +E   +L GK+  + D  
Sbjct: 4  KPGIPKGTRDFGPVEMAKRNYIFNTIKEVYALYGFQQIETPSMENLSTLMGKYGDEGD-- 61

Query: 67 NKGVFSLQDDDG 78
           K +F + +   
Sbjct: 62 -KLLFKVLNSGD 72


>gi|162457181|ref|YP_001619548.1| ATP phosphoribosyltransferase regulatory subunit [Sorangium
           cellulosum 'So ce 56']
 gi|161167763|emb|CAN99068.1| ATP phosphoribosyltransferase regulatory subunit [Sorangium
           cellulosum 'So ce 56']
          Length = 431

 Score = 84.5 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 3/123 (2%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
             D   +E R R  +   + + +   G+ P+  P  E+++ L + L   D     V    
Sbjct: 1   MRDLLPEEARRRRALAKRVLDHFVLCGYQPVSLPAFEFAEVLERGLGTLDA--ADVLRFI 58

Query: 75  DD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +   G+  +LR D+T  +AR VA        P R    G V R  +    R RQ  Q  V
Sbjct: 59  EPESGEVAALRPDMTPQIARLVATRLADAPRPIRLCYEGTVLRRRQGRARRHRQIPQAGV 118

Query: 134 DNV 136
           +  
Sbjct: 119 ELY 121


>gi|313672339|ref|YP_004050450.1| histidine--tRNA ligase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939095|gb|ADR18287.1| Histidine--tRNA ligase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 347

 Score = 84.5 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 123/387 (31%), Gaps = 54/387 (13%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD-GQWI 81
            +  NRI+  I ++   YG+  I  P+ EY D L       +  ++ +    D + G+ +
Sbjct: 10  AKNMNRIISIISDVLSLYGYSEIFLPIYEYYDVLVDKT--FNFNDENIIRFIDRNTGKSL 67

Query: 82  SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
            LR D T  + R VA     I  P R    G VFRN     G   +  Q   +  G+  E
Sbjct: 68  VLRPDFTPQVCRIVANYLSDIPLPIRLSYSGRVFRNVGIHKGMKSEKYQVGGELFGADEE 127

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
           + D E+ +++   +  + I      IG          L  +    D              
Sbjct: 128 SGDLELLLIVKRVMNRLKIDNYKIVIGDKR------FLNILSNFID-------------- 167

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 ++ +  +L          + K         D++    +      + +   L+  
Sbjct: 168 ------IEPLLKILESKNYSEMETYLKSLPQDRGIYDLISYLPNAFGGLGVLDKIYLLSN 221

Query: 262 -TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
            +   ++    L  I E   + G + +++    +  RGL YYTG  ++ +          
Sbjct: 222 FSETLKERVLHLKGIIEKFIEIGGDIDKVVFDVSETRGLNYYTGINFDIVSLDNGNLLGG 281

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                       RYD L+ +F          +     +   L  +       + M  +  
Sbjct: 282 GG----------RYDTLMEKFGY----GVTAAGVAFNVDEILSLIGFDKYIDENMVFID- 326

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                      K     + LR   ++ 
Sbjct: 327 ---------QEKGIKVAEKLRDESVKV 344


>gi|34498984|ref|NP_903199.1| ATP phosphoribosyltransferase regulatory subunit [Chromobacterium
           violaceum ATCC 12472]
 gi|46395716|sp|Q7NS97|HISZ_CHRVO RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|34104834|gb|AAQ61191.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 383

 Score = 84.5 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 134/403 (33%), Gaps = 54/403 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP   AD      R       ++   +   G++ +  PL+EY DSL     D        
Sbjct: 6   LPEYIADILPATARQVESAKAAMLEGFRVAGYELVLPPLIEYIDSLVSEGDDTLDLK--T 63

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D   G+ + LR D+T  +AR  A          R    G V  +   G    R+ +
Sbjct: 64  FKLDDQLSGRQLGLRADITPQVARIDAHLLGERTGVTRLCYAGSVVHSRPSGLTSSREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +   AD E+  +M  TLE  G+K+    + + +  I  G+    GL  +  
Sbjct: 124 QVGAELYGYAGIEADQEIIELMLATLEKAGVKK--LRLDVGHIAIYRGLAAAAGLSPEVS 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +  LL     D +G   + A +        ++   +   
Sbjct: 182 R-------------------ELFGLLQN--KDAAGIAARVAGVAEPYKSAFLALPELYGP 220

Query: 250 KS-MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +      E G  +L  I+  +         +      +RG  Y+TG ++ 
Sbjct: 221 AAVLEKARTRLPSLPEVELGLMQLSAIARAME----GRVELSFDLAELRGDFYHTGLMFA 276

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A            P    ++  GGRYD +  RF  +  PATGFS+ +  L+  L   + S
Sbjct: 277 AYA----------PGWSDAIARGGRYDNVGRRFG-RARPATGFSLDLRDLLRILPERDPS 325

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
                                L         LR  G    +  
Sbjct: 326 RGIRVSARH------------LPAAAAEVSRLRAEGEMVVVDY 356


>gi|255731278|ref|XP_002550563.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240131572|gb|EER31131.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 1710

 Score = 84.5 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 71/481 (14%), Positives = 155/481 (32%), Gaps = 48/481 (9%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEY--SDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
            +  + ++I++ I  I+  +G        +E   ++ L   +P + R  + V+ + D  G 
Sbjct: 1091 DYLLFDKIMNEIYKIFATHG-------AVENLNTNLLLPKVPFQAR--EQVYEILDKSGS 1141

Query: 80   WISLRYDLTAPLARYVA---ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             ++L YDLT P AR+++    +    ++                       F      + 
Sbjct: 1142 VLTLPYDLTLPTARFLSKTDMSAIPKIYRHEFVYRPNARGVGMPDRYSAVHFDIVGNSDT 1201

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
              S+       C+ + D +        +  I IN+  ILD +      +        L  
Sbjct: 1202 NKSSLFTHDAECLKIVDDIVNSFPCFKNAIIVINHYDILDAVTTFAFEN------VGLDE 1255

Query: 197  LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELY 256
             R +D        G+     E +     DF     +T + +D     ++ ++EKS  +L 
Sbjct: 1256 KRKVDIFGVLSQLGIDKTADEIKRYLREDFQVPHTVTKDLVDNFN--ITCEIEKSRQKLT 1313

Query: 257  ELVKGTI---AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
            +L+  +      E+ +  L+ + +++++       +    +      Y  G ++ A+   
Sbjct: 1314 KLMVDSPQLIKIERAYTYLIEVYKILKQMNIYVPVVFNPLSNYNSKYYTKGIMFSAVFKS 1373

Query: 314  PVMNEKQKP---VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                   +      F S+ G         +           S+    +   +        
Sbjct: 1374 DKSKRYTRLVTGGRFDSLIGSLANVSTNVKTPHGVGFTLTTSLLFLLMKNLISRKSKIDL 1433

Query: 371  NIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQ---LKYADR 426
            +  +     +         LS+        L    I A++ LGS     +Q      A  
Sbjct: 1434 SKWKGSRCKVVIGSTQQQFLSQCGYSLLASLWNRNISADINLGS----KSQDEIYHNATT 1489

Query: 427  RNCPLAIIQ--------GTGERSRGML----QIKDLAKGKELSREIKNNESWREARVAQI 474
                  +I         G   R  G +    + K++  GKE+  E     ++    + + 
Sbjct: 1490 DGATWVVIIRQLPSNVGGRKVRKSGSIFKPLKAKNIINGKEIDLEFDELVTYLVGELGES 1549

Query: 475  T 475
             
Sbjct: 1550 E 1550


>gi|255018701|ref|ZP_05290827.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL F2-515]
          Length = 132

 Score = 84.5 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 6/134 (4%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
            L   LP G  D   +E R+  +I   + + +E  GF  IETP++E+ D        E +
Sbjct: 2   NLNKNLPTGTRDKLFREARVAYKIEQQVNHYFEKRGFKRIETPVIEFEDVFS----SEHQ 57

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +  ++    + G+   LR D+T P+ R V+     +    +    G +FR  +   G  
Sbjct: 58  ADAKLYRFFXEKGRLTVLRPDMTLPIGRVVSTTGVMLP--LKLSYSGKIFRANEDFGGEQ 115

Query: 126 RQFIQCDVDNVGSS 139
            +  Q  ++ +G  
Sbjct: 116 NEQTQAGIEIIGYP 129


>gi|260881838|ref|ZP_05893576.1| proline--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260847809|gb|EEX67816.1| proline--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 571

 Score = 84.5 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 55/538 (10%), Positives = 135/538 (25%), Gaps = 77/538 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R   +I   IR   +  G   I  P+L+ ++   +        
Sbjct: 31  MIRKTAGGMYTFLPLAWRTIRKIEQIIREEMDAAGGQEIMMPILQPAE-FWQESGRWGAY 89

Query: 67  NKGVFSLQDDDGQWISLRY----DLTAPL---ARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              +  ++D  G+   L       +TA +    R   E    +      +R     R   
Sbjct: 90  GDEMMRIKDRHGRDFCLGPTHEEMITALVRDEVRSYKELPLMLYQIQDKFRDERRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV---------------GIKRND 164
                F        D        +  +M     +    +               G   ++
Sbjct: 150 MRSREFIMKDLYSFDKDVEGMNESYKKMYDAYTNIFTRMGLEFRPVEADNGAIGGGHSHE 209

Query: 165 YHIGINNRKILDGILEKI-GLHGDDKLNERLIVLRAIDKLD--------KFGLQGVKLLL 215
           + +  +  +    +  K      D+K   + +   A D+L            ++ +   L
Sbjct: 210 FTVLADAGESNIAVCTKCDYAASDEKAELKPVEAPAEDELPLEKVSTPGTNTIEALCDFL 269

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVI 275
                          +     +  +     ++  K ++++   +   +A E+        
Sbjct: 270 KVPADKTIKAVAYQTDKDELVLAFIRGDHDVNEVKVINQIEGALDLRMAEEEAIRAAGGC 329

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
              +   G   +   +    V  +        E  + +  +N ++       +    R  
Sbjct: 330 PGFMGPIGIKKDTHVLVDATVMNMHNAVTGANEVDVHYKNVNPQRDFDKDAIIVTDLRMV 389

Query: 336 GLVSRFKGQNVP--------------------------------------ATGFSIGISR 357
                      P                                         + IG+ R
Sbjct: 390 KEGDPCPHCGAPLKMTRGIEAGQVFTLGTKYSKAMGATFLDENGKEQPLVMGCYGIGVGR 449

Query: 358 LIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            + A     +          I     V++       + L+  +      R AG+   +  
Sbjct: 450 TMAAAIEQNNDDQGIVWPRAIAPFEVVVVAVNAKKEEQLTYAEGIYDECRKAGLDVLLDD 509

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              +  G + K  D    P+ +  G       ++++K    G+  +    +     + 
Sbjct: 510 RKERA-GVKFKDCDLIGYPVRVTIGPKAVDEDIIEVKVRKTGEVYNFTRADYLEKVQE 566


>gi|13471387|ref|NP_102953.1| prolyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|81855688|sp|Q98KS5|SYP_RHILO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|14022129|dbj|BAB48739.1| proline-tRNA ligase [Mesorhizobium loti MAFF303099]
          Length = 442

 Score = 84.5 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 57/448 (12%), Positives = 123/448 (27%), Gaps = 59/448 (13%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+ +++   IR      G   I  P ++ +D L +     +   K +  ++D  
Sbjct: 42  WLPLGKRVLDKVCQIIREEQNRAGALEILMPTIQSAD-LWRESGRYNDYGKEMLRIKDRQ 100

Query: 78  GQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
            + +       ++   + R   +++  +      Y I   FR+E        +  +  + 
Sbjct: 101 DRDMLYGPTNEEMVTEIFRAYVKSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSREFLMK 158

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           +  S     +          +  +             R  L  I                
Sbjct: 159 DAYSFDLDFEGARSAYNRMFVSYL---------RTFTRMGLQAI---------------- 193

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                           ++   G    D S +F   A+    Q+     +LS+ +  +  +
Sbjct: 194 ---------------PMRADTGPIGGDLSHEFIILADTGESQVFCHRDYLSLAVPGANTD 238

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
                       K +      ++ +          +      RG+E      +      P
Sbjct: 239 FAND-GEIADIVKTWTTPYAATDEMHDEAAWEKVPESDKVSARGIEVGHIFHFGEKYSKP 297

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
           +  +   P        GG Y    SR       A           +      +  +    
Sbjct: 298 MGAKVTGPDGKDHFASGGSYGIGPSRLV-----AAIIEASHDENGIIWPDAVAPFDIGLI 352

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V     D  S+ L+           AG    ++  + +  G +   AD    P  +I
Sbjct: 353 NMKVGDADCDRVSEELNAAFT------AAGKDV-LYDDTDQRPGGKFATADLIGLPWQVI 405

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKN 462
            G    + G ++IK+   G+  +  I +
Sbjct: 406 VGPRGVAAGEVEIKNRRTGERETLPIAD 433


>gi|319892279|ref|YP_004149154.1| Prolyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317161975|gb|ADV05518.1| Prolyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 567

 Score = 84.5 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 75/547 (13%), Positives = 152/547 (27%), Gaps = 85/547 (15%)

Query: 7   LRAELPR----GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           L+A L +    G         R+ ++I D IR   E      +  P+L+ S+ L K    
Sbjct: 27  LKAGLIKQNAAGVYSYLPVATRVIHKISDIIRQEMERIDAVEVVMPVLQQSE-LWKESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGPVF 115
            D     +  L+D + +  +L     ++   L     R   +   T+      +R     
Sbjct: 86  WDAYGMELMRLRDRNQREFALGPTHEEVVTSLVRDELRSYKQLPLTLFQIQTKFRDEKRP 145

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH--------I 167
           R        F             S       M    +   + VG+               
Sbjct: 146 RFGLLRGREFIMKDAYSFHTDEESLMETYQNMYNAYSTIFKRVGLNVRPVVADSGAIGGN 205

Query: 168 GINNRKILDGI------------------------------LEKIGLHGDDKLNERLIVL 197
             +    L  I                               E +      +        
Sbjct: 206 HTHEFHALSAIGEDTIVYSNNSDYAANIEKAEVTYYETANTAEALQPLEKVETPNVKTAQ 265

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID--LEKSMHEL 255
              D L +     +K ++ +          +G +  ++    +  +   D     +  E+
Sbjct: 266 ELADFLGQPLENIIKTMVFKVNGAFILLLVRGHHEVNDV--KIKDYFKTDDVAMATDDEI 323

Query: 256 YELVKGTI--------AGEKGFNELVVISELVRKSGYNSNRIKISSTIV-RGLEYYTGCV 306
             L+  +            K + +  V S      G N +     +  V R  +      
Sbjct: 324 RNLLGASPGSLGPVTDRDVKVYADQFVQSLRNLAIGANEDGYHYVNANVERDFQIEGYGD 383

Query: 307 YEAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLV------SRFKGQNVPATGFSI 353
           +  IL    + +   P  F            G +Y   +       + + QN+    + I
Sbjct: 384 FRFILEGEPLADGSGPAQFAEGIEVGQVFVLGEKYSEAMKATVLNQQGREQNLTMGCYGI 443

Query: 354 GISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           G+SR + A+              ++      LI+      +  +        L   G   
Sbjct: 444 GVSRTLSAIIEQHHDDNGIIWPKSVTPFDVHLISVNPKKDEQRACADRLYDQL--LGTYD 501

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            ++   ++  G +   AD    P+ ++ G    S G++++K    G      + +  +  
Sbjct: 502 VLYDDRNERAGVKFNDADLIGIPVRVVVGKN-ASEGIVEVKRRDTGDSEDVHVNDLVTHL 560

Query: 468 EARVAQI 474
           E    QI
Sbjct: 561 EKLYEQI 567


>gi|323464624|gb|ADX76777.1| prolyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 567

 Score = 84.5 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 75/547 (13%), Positives = 152/547 (27%), Gaps = 85/547 (15%)

Query: 7   LRAELPR----GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           L+A L +    G         R+ ++I D IR   E      +  P+L+ S+ L K    
Sbjct: 27  LKAGLIKQNAAGVYSYLPVATRVIHKISDIIRQEMERIDAVEVVMPVLQQSE-LWKESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGPVF 115
            D     +  L+D + +  +L     ++   L     R   +   T+      +R     
Sbjct: 86  WDAYGMELMRLRDRNQREFALGPTHEEVVTSLVRDELRSYKQLPLTLFQIQTKFRDEKRP 145

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH--------I 167
           R        F             S       M    +   + VG+               
Sbjct: 146 RFGLLRGREFIMKDAYSFHTDEESLMETYQNMYNAYSTIFKRVGLNVRPVVADSGAIGGN 205

Query: 168 GINNRKILDGI------------------------------LEKIGLHGDDKLNERLIVL 197
             +    L  I                               E +      +        
Sbjct: 206 HTHEFHALSAIGEDTIVYSDNSDYAANIEKAEVTYYETTNTAEALQPLEKVETPNVKTAQ 265

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID--LEKSMHEL 255
              D L +     +K ++ +          +G +  ++    +  +   D     +  E+
Sbjct: 266 ELADFLGQPLENIIKTMVFKVNGAFILLLVRGHHEVNDV--KIKDYFKTDDVAMATDDEI 323

Query: 256 YELVKGTI--------AGEKGFNELVVISELVRKSGYNSNRIKISSTIV-RGLEYYTGCV 306
             L+  +            K + +  V S      G N +     +  V R  +      
Sbjct: 324 RNLLGASPGSLGPVTDRDVKVYADQFVQSLRNLAIGANEDGYHYVNANVERDFQIEGYGD 383

Query: 307 YEAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLV------SRFKGQNVPATGFSI 353
           +  IL    + +   P  F            G +Y   +       + + QN+    + I
Sbjct: 384 FRFILEGEPLADGSGPAQFAEGIEVGQVFVLGEKYSEAMKATVLNQQGREQNLTMGCYGI 443

Query: 354 GISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           G+SR + A+              ++      LI+      +  +        L   G   
Sbjct: 444 GVSRTLSAIIEQHHDDNGIIWPKSVTPFDVHLISVNPKKDEQRACADRLYDQL--LGTYD 501

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            ++   ++  G +   AD    P+ ++ G    S G++++K    G      + +  +  
Sbjct: 502 VLYDDRNERAGVKFNDADLIGIPVRVVVGKN-ASEGIVEVKRRDTGDSEDVHVNDLVTHL 560

Query: 468 EARVAQI 474
           E    QI
Sbjct: 561 EKLYEQI 567


>gi|222148295|ref|YP_002549252.1| prolyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735283|gb|ACM36246.1| prolyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 498

 Score = 84.5 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 54/451 (11%), Positives = 124/451 (27%), Gaps = 59/451 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR      G   +  P L+ ++ L +     D   K +  +
Sbjct: 96  GIYSWLPLGKRVLDKVNAIIRQEQNRAGAVELLMPTLQSAE-LWQESGRYDDYGKEMLRI 154

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D   + +       ++   + R   +++ ++                            
Sbjct: 155 KDRQDRPMLYGPTNEEMITDIFRSYVKSYKSLPL-------------------------- 188

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                           +  +     + +  +           K                 
Sbjct: 189 ---------------NLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLTKESAIHSYN 233

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                 LR  D+L    +  ++   G    ++S +F   A+    ++    SFL   +  
Sbjct: 234 KMFAAYLRTFDRLGLRAI-PMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDRAIPS 292

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           +    ++ V G  A    +      +  +            +    RG+E      +   
Sbjct: 293 A-DTDFDDVAGLQAIFDDWTSHYAATSEMHDEAAYGAMPDDAKISARGIEVGHIFYFGTK 351

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              P+  + Q P     +   G Y         + VPA   +      I+          
Sbjct: 352 YSEPMGAKVQGPDGKEHLVHMGSY----GIGPTRLVPAIIEASHDENGII-------WPA 400

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
           ++     ++I     D+            L  AG    +     +  G +   AD    P
Sbjct: 401 SVAPFDAIIINMKAGDAGCDGACDTVYGALTKAGKDVLLDDTDDRA-GAKFALADLIGVP 459

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +I G    + G +++K+   G+  +  I+
Sbjct: 460 YQVIVGPRSVANGEVELKNRKTGERETMTIE 490


>gi|149184020|ref|ZP_01862383.1| histidyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848273|gb|EDL62560.1| histidyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 94

 Score = 84.5 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDR 65
          +  ++PRG  D    +      +  +  +I  NY ++ I TP+ E S+   + + D  D 
Sbjct: 33 MSIKIPRGTQDILPADSVKWQYVEKTAADICRNYQYEEIRTPIFESSELFLRGVGDTTDI 92

Query: 66 PN 67
            
Sbjct: 93 VQ 94


>gi|148653608|ref|YP_001280701.1| ATP phosphoribosyltransferase regulatory subunit [Psychrobacter sp.
           PRwf-1]
 gi|148572692|gb|ABQ94751.1| tRNA synthetase, class II (G, H, P and S) [Psychrobacter sp.
           PRwf-1]
          Length = 431

 Score = 84.1 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 67/403 (16%), Positives = 132/403 (32%), Gaps = 37/403 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G +D  ++E + +  +   +  +  + G++ I  P++E+++SL       +   +  
Sbjct: 31  LPDGVSDLLSEEAQKQEWLRYKLTRLLVSRGYELICPPMIEFTESLL--GNASEDLKRQT 88

Query: 71  FSLQDD-DGQWISLRYDLTAPLAR--YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           F + D   G+ + +R D+T  + R               R    G V R    G    R 
Sbjct: 89  FKIIDQLSGRLMGVRADITPQILRIDAHLNKMGKANKIARYCYAGHVIRTLPDGLFGSRT 148

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
            +Q   +  GS +  AD E+  ++   +  + +K+                     LH D
Sbjct: 149 PLQLGAEIFGSDSLDADIELIDVLYCLINNLNLKK--------------------HLHID 188

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                    L+ +  L +     +  L                 + ++     ++    D
Sbjct: 189 IGHVAIFARLKELAGLSENDASVLMNLYANKALPELKQVCAELPMGNDFYQ--LAVYGHD 246

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           +      L +      A  K   E+  +   ++ +  ++  + I+     G  Y+TG V+
Sbjct: 247 MNALKQALSQTATQDKAIIKAVQEVQAMVAHIKNTYQSNVSVDITEL---GYHYHTGIVF 303

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK---S 364
            A       NE Q  V  G   G G      +         +  + G S  +  L+   S
Sbjct: 304 NAYFE----NESQAVVRGGRFNGEGFDAASQASTAIAEELPSRSATGFSLEVTRLQRFIS 359

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           L  S   +     +     D +    +        LR  G R 
Sbjct: 360 LNESKLVLVSFADMQGVRSDDNEKLANDLTTKIAELRDLGHRV 402


>gi|295689605|ref|YP_003593298.1| prolyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295431508|gb|ADG10680.1| prolyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 443

 Score = 84.1 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 57/461 (12%), Positives = 122/461 (26%), Gaps = 62/461 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+ N+I   +R   +  G   +  P ++ +D L +     D  
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLNKIEQIVREEMDRAGAIELLMPTIQLAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  + D   + +       ++   + R   +++  +      Y I   FR+E+    
Sbjct: 90  GDEMLRITDRHKRELLFGPTAEEVVTDIFRASIKSYKDLPK--NLYNIQWKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S    AD          +  + +           R  L  +     
Sbjct: 148 GVMRGREFFMKDAYSFDLDADGARKSYNRMFVAYLNLFA---------RMGLKAV----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      ++   G    D S +F   A      +      
Sbjct: 194 --------------------------PMRADTGPIGGDLSHEFIVLAETGESAVFCHKDL 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           + +       +   +             L   +E +      +   +      RG+E   
Sbjct: 228 VEMPAPGPDLDW--INGDLQPIVNQRTALYAATEEMHDEAAFNALPEGDRLSARGIEVGH 285

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +      P+    Q P         G Y   VSR  G  + A+              
Sbjct: 286 IFSFGTKYSEPMKATVQGPDGQQVPVQMGSYGVGVSRLLGAIIEASH------------D 333

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT-QMLRTAGIRAEMFLGSSKNFGNQLK 422
                         V I  M     +           L+ AG         ++  G +  
Sbjct: 334 EGGIIWPESVAPFDVGIVNMRQGDAACDAACETAYNALKAAGRDVLYDDTDARG-GAKFA 392

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             D    P  +I G    + G+++IK+   G+  +  + + 
Sbjct: 393 TMDLIGLPWQLIVGPKGIAEGVVEIKNRKTGERHTASLDSV 433


>gi|154248383|ref|YP_001419341.1| prolyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|226701431|sp|A7INT8|SYP_XANP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154162468|gb|ABS69684.1| prolyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 440

 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 57/461 (12%), Positives = 122/461 (26%), Gaps = 63/461 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ N++ + IR      G   +  P ++ +D L +     D   K +  +
Sbjct: 38  GIYAWLPFGLRVLNKVCNIIREEQNRSGAIEMLMPTIQSAD-LWRESGRYDDYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-PVFRNEKHGPGRFRQFI 129
           +D   + +       ++   + R   +++  +       +         + G  R R+F+
Sbjct: 97  KDRHEREMLFGPTNEEMITEIVRAYVKSYKALPLNLYHIQWKFRDEVRPRFGVYRSREFL 156

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
             D  +    A  A      M    L             + +   + G L    +     
Sbjct: 157 MKDAYSFDLDAAGARHSYNKMFVAYLRTFARMGLKAIPMVADTGPIGGNLSHEFI----- 211

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                                +    GE      GD+ + A  +++              
Sbjct: 212 ---------------------ILASTGESEVFCHGDYLEMAPPSADV------------- 237

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                 ++   G  +    + EL   +         +   + S    RG+E      +  
Sbjct: 238 -----NFDDAAGLQSVFDRWTELYAATSEKHDEAAFAAIPEASRMAARGIEVGHIFYFGT 292

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
               P          FG+   G   DG        +       +  + +  +        
Sbjct: 293 KYSEP----------FGAKVLGA--DGAEHTIHMGSYGIGPSRLVAAMIEASHDDNGIIW 340

Query: 370 NNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +      V I  +     +     +     L  AG          +  G +   AD   
Sbjct: 341 PDAVAPFQVGILNLKAGDSTTGAACEKLYAELTAAGYDVLYDDTEERA-GAKFATADLIG 399

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            P  I+ G    + G +++K    G        +     +A
Sbjct: 400 LPWQILVGPKGLADGKVELKRRVDGSRELIAPGDILERLKA 440


>gi|323340221|ref|ZP_08080485.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           ruminis ATCC 25644]
 gi|323092412|gb|EFZ35020.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
           ruminis ATCC 25644]
          Length = 381

 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 76/393 (19%), Positives = 147/393 (37%), Gaps = 50/393 (12%)

Query: 8   RAELPRGFADCPTKEIRIRNRI-LDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  LP G  D   +++ I N++    I+ ++E  GF  I+TPLLEY +       D   P
Sbjct: 3   KFRLPPGLGDELDEQLSIENKVSFWMIKRLHER-GFAQIKTPLLEYFELF----EDYRMP 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           N+ ++ L   D + + +R D+T P+AR+++     +    + + IG ++R  +   G   
Sbjct: 58  NQKMYRLGARDSRELVIRPDMTLPVARFLSTQNVKLP--AKFFYIGDLYRKNRDLSGLCD 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           Q  Q  V+ VG +++ A+ E   ++++            ++ + + K+ D  L+ + +  
Sbjct: 116 QACQLGVELVGYASKKAELECLELLSELNRTF--LGGRLNLELGHAKLADEALKVLSIDE 173

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +  L  +  +      L    ++  +                                  
Sbjct: 174 EKMLAIKEALFEKKLPLYFKLIEPFRSNRSYPFFKAWPRLF------------------- 214

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR-GLEYYTGC 305
               S+ E+   +K     E   + L  + E+ +       R             YYTG 
Sbjct: 215 ---GSVEEVETSLKKLEIPETIEHSLNEVFEIAKACEVLGGRKASLDLSAPGPQPYYTGI 271

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V++  L          P    +V  GGRYD ++  F+ +  PA G  I +S L   LK  
Sbjct: 272 VFKGYL----------PNASRNVISGGRYDRMLESFQEEPEPAVGMGIELSFLSELLKDR 321

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
                        L T +  + + L +     +
Sbjct: 322 -------LPRTKTLPTLVYFEKEQLKQAMDLVK 347


>gi|329119453|ref|ZP_08248138.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327464386|gb|EGF10686.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 384

 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 3/147 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + I  ++ ++G++ +  PLLEYSDSL   +      +  
Sbjct: 5   QLPEYVADILPTGARQLESAKEKILALFRSHGYELVHPPLLEYSDSLLTHIDSG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV      G    R+ 
Sbjct: 63  TIRIADQLSGRQLGIRADITPQVARIDAHLLSANDGINRLCYAGPVLHARPEGFLSTREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTL 155
           +Q   +  G +   AD E   +M D+L
Sbjct: 123 LQVGAEFYGYAGVAADIETVGLMLDSL 149


>gi|85103595|ref|XP_961553.1| hypothetical protein NCU01187 [Neurospora crassa OR74A]
 gi|3355628|emb|CAA62973.1| CPC3 protein [Neurospora crassa]
 gi|18376281|emb|CAD21394.1| cpc-3 protein [Neurospora crassa]
 gi|28923100|gb|EAA32317.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 1646

 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 73/497 (14%), Positives = 155/497 (31%), Gaps = 65/497 (13%)

Query: 19   PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
              +E+  +  + D++ +I+  +G   +E P +          P      +    L D +G
Sbjct: 1025 SPQELMRQFIVKDTLISIFRRHGA--VEAPTVCLY-------PSSSHYGQNAVHLLDQNG 1075

Query: 79   QWISLRYDLTAPLARYVA--ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
              + L +DL    AR +A   N   +        I                       + 
Sbjct: 1076 TVLQLPFDLMMGHARSLARITNSPVVQKSYSFGNIFRDRHGGGQPDVYGEVDFDIVTSDA 1135

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
               A      + ++         +        + +  +L+ I E  G+    +     ++
Sbjct: 1136 LDLALKEAEVIKVLDEIATAFPTVSSTPICFQLGHSDLLNLIFEYCGVEVGTRRAAAEVL 1195

Query: 197  LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHEL 255
             +    +  F  Q V+  L                +++  +D +  F   D   K++ ++
Sbjct: 1196 SKL--NIRNFTWQKVRGELRSPMV----------GISATSVDELQRFDFRDTPSKAIAKI 1243

Query: 256  YELVKGTIAGEKGF---NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
              L +GT   ++       L  + E  ++ G  +       + +    +  G ++  +  
Sbjct: 1244 KLLFEGTEYYQQASSTLAHLKEVYEYTKRFGVQNKIYIAPLSSINEAFFRGGILFSCLYD 1303

Query: 313  FPVMNE-----------KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
              V +            K+     G+        G    ++ Q       + G + L  A
Sbjct: 1304 KKVKDVFAAGGRYDSLIKEHRPKIGNRFEERHAVGFSLNWEKQLAKPVPKATGKTFLKKA 1363

Query: 362  LKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
             +       NIK      +     D +   S      Q L    I AE+    +++  + 
Sbjct: 1364 AEEESQGLFNIKRCD---VLVASFDPEVLRSSGIELVQTLWAHSISAELA-RDARSPEDL 1419

Query: 421  L-KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
            L KY D       +I     +   ML+IK +A                        IP  
Sbjct: 1420 LSKYRDES-YLWVVII----KQDNMLKIKSMA----------------RKDAPDADIPAK 1458

Query: 480  ELVSTVKKILQENKEEI 496
            EL++ +K  ++EN++ +
Sbjct: 1459 ELLNWLKAEMRENRDAL 1475


>gi|78357249|ref|YP_388698.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|114152190|sp|Q30Z93|SYP_DESDG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78219654|gb|ABB39003.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 574

 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 63/543 (11%), Positives = 135/543 (24%), Gaps = 80/543 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R   +    +R    + G   +  P+++ +D L +     D  
Sbjct: 31  MIRKLTSGIYIYLPLGLRSIEKAASIVRQEMNSAGAQELLMPMVQPAD-LWQESGRWDFY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +  + D  G+   L         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRISDRHGRDYCLGPTHEEVITDLVRGEVRSYRQLPLNLYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D      + +   M          +G+K   +     +   + G  
Sbjct: 150 MRGREFMMKDAYSFDRDAQGLDLSYRAMYEAYMKIFSRMGLK---FRAVEADSGSIGGSF 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +   +   + +      D         V   L E     +G            ++ 
Sbjct: 207 SHEFMVLAETGEDTIAFCHDCDYSANVERAEVVCTLDECDAPVAGVEEVHTP-DRHTVEE 265

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  F+++     +  L  +  G         +  +    ++           S   VR  
Sbjct: 266 VCEFMNVPAAALIKTLLYVADGEPVAALVRGDRELNEAKLKNLLRADTLELASPEQVREW 325

Query: 300 --------------------EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
                               +       + I G    +   + V          Y  L  
Sbjct: 326 TGAPVGFAGPVGLGVKRLFADNELRLATDWITGANKADTHLRHVSLKRDTRLSGYADLRM 385

Query: 340 RFKGQNVPATGFSIGISRLIVA----------LKSLESSTNNIKEMGPVLITTMDHDSDS 389
                  P    ++ ++R I             +++     +      V++        S
Sbjct: 386 ITDKDPCPRCSGTLELTRGIEVGHVFKLGTKYSEAMGCKFLDENGKEQVMLMGCYGIGVS 445

Query: 390 LSKYQMYTQMLRTAGI-------------------------RAEMFLGS----------- 413
                   Q     GI                         R +   G+           
Sbjct: 446 RVVAACIEQNSDENGIVFPPPIAPFEVLLLNLDGKNDDVNARVDELYGAVQAAGCDVLMD 505

Query: 414 --SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G + K AD    P+ ++ G    +RG+++ KD   G++    +        A  
Sbjct: 506 DRNERPGVKFKDADLIGVPMQLVVGGKGLARGIVEAKDRRTGEKTELPVDGFAQAFAAWR 565

Query: 472 AQI 474
            Q+
Sbjct: 566 RQV 568


>gi|27379988|ref|NP_771517.1| prolyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|81841648|sp|Q89KM8|SYP_BRAJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27353142|dbj|BAC50142.1| prolyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 439

 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 56/459 (12%), Positives = 123/459 (26%), Gaps = 60/459 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  +I   +R   +  G   +  P L+ +D L +     D  
Sbjct: 31  MIRQEAAGIYAWLPLGFRVLKKIEQIVREEQDRSGALELLMPTLQLAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  + D   + +       ++   + R   +++  +       +       ++   G
Sbjct: 90  GPEMLRIADRHKRELLYGPTNEEMITEIFRAYVKSYKNLPLNLYHIQW-KFRDEQRPRFG 148

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
             R       D        A A +                   +    R  L  I     
Sbjct: 149 VMRGREFLMKDAYSFDLNEAAARVAYNKMFVAY----------LRTFARMGLKAI----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      ++   G    D S +F   A      + I    
Sbjct: 194 --------------------------PMRAETGPIGGDLSHEFIVLAETGESGVFINRDV 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L + +     +    +  T   ++  +      ++   + +     +      RG+E   
Sbjct: 228 LDLPVPGEDVDYESDL--TPIIKQWTSVYAATEDVHDAARFEQEVPEAKRLNTRGIEVGQ 285

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +      P+      P        GG Y   VSR  G  + A     GI        
Sbjct: 286 IFYFGTKYSEPMKAMVAGPDGVDVPIHGGSYGVGVSRLLGAIIEACHDDAGI-------- 337

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                   +     V++     D+   +  +     L+  G+   ++  + +  G +   
Sbjct: 338 ---KWPEAVAPFRAVVLNLKQGDAAVDAACEKLYAELQAKGVDV-LYDDTDQRAGAKFAA 393

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AD    P  I+ G    + G +++K  + G   +    +
Sbjct: 394 ADLIGIPWQIMIGPKGLADGKVELKRRSDGSRETMSPAD 432


>gi|154311379|ref|XP_001555019.1| hypothetical protein BC1G_06542 [Botryotinia fuckeliana B05.10]
 gi|150850939|gb|EDN26132.1| hypothetical protein BC1G_06542 [Botryotinia fuckeliana B05.10]
          Length = 1449

 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 62/442 (14%), Positives = 132/442 (29%), Gaps = 39/442 (8%)

Query: 7    LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            +    P G  D       ++  +   + +I+ N+G   +ETP    S       P  D  
Sbjct: 914  MGVPTPSG-NDLL-----LQGLVKQKLISIFRNHGA--VETP---RSILF----PSSDHY 958

Query: 67   NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                  L D  G  + L YDLT P AR +A++   +        +     +         
Sbjct: 959  GVNAVQLLDKSGTLLQLPYDLTVPNARAIAKHQPPVERSFAFGTVFRDKHDGASPQTFSE 1018

Query: 127  QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                    +    A      + ++         +  +     IN+  +L  I +   +  
Sbjct: 1019 VDFDVVTSDSLDLALKEAEVIKVLDEIVASFPSLPSSQMCFHINHADLLGLIFDFCRI-- 1076

Query: 187  DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +  + +      +   + ++  Q ++  L           +    +++  ++ +  F   
Sbjct: 1077 EPSIRQAAADTLSKLNVQQWTWQKIRAELR----------SPLVGVSATSVEDLQRFDFR 1126

Query: 247  DLE-KSMHELYELVKGTIAGEKG---FNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            D   K+  +L  + +GT   EK       L  +    ++              ++   Y 
Sbjct: 1127 DTPTKAFQKLKVIFEGTEIFEKASSSIAHLRDVIAYTKRFEVQRKIYVNPLGSLKEKFYK 1186

Query: 303  TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS----RL 358
             G ++  +    V +       + S+    R+   ++  +        +           
Sbjct: 1187 GGILFSCLYDRKVRDVFAAGGRYDSLIRENRHHKNINDERHAVGFNLAWEKMARLPKANS 1246

Query: 359  IVALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
               LK  +     I       +    HD+    S        L +  I AE+    S++ 
Sbjct: 1247 KGFLKKPDEEVQGIWNTKRCDVLVASHDAATLRSTGVELVSNLWSHDISAELA-RDSRSP 1305

Query: 418  GNQL-KYADRRNCPLAIIQGTG 438
             + L KY D       II    
Sbjct: 1306 EDLLSKYRDDS-YSWIIIIKQD 1326


>gi|240115248|ref|ZP_04729310.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae PID18]
 gi|260440935|ref|ZP_05794751.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae DGI2]
 gi|268600929|ref|ZP_06135096.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291044261|ref|ZP_06569970.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae DGI2]
 gi|268585060|gb|EEZ49736.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291011155|gb|EFE03151.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae DGI2]
          Length = 383

 Score = 84.1 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 76/410 (18%), Positives = 137/410 (33%), Gaps = 53/410 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLENAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLPNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+       L    +K  D    + +   + GI   +      
Sbjct: 123 LQAGAEMYGFADIRGDIELI-----DLMLKSMKIADMGKVLLSLGHI-GIFRALSDAAHL 176

Query: 189 KLNERLIVLRAIDKLDKFGLQ-GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
              +   +L  +   D   ++  VK    +G    +                        
Sbjct: 177 DAGQSATLLALMQDKDTGSVEAQVKAWKLDGMWAKAFSLLPRL---------------YG 221

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + +    +    A     +EL  + +      +  N I I  + +R   Y+TG +Y
Sbjct: 222 GREVLSDARGRLPDLSAVGGALDELQAVCD-----AFPDNEIHIDLSELRVDNYHTGLLY 276

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E 
Sbjct: 277 AAYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAVER 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                          +  D++     +   + LR  G    +  G   N 
Sbjct: 326 QP------------AVSVDAEDAEAAREAVEALREQGQCVVIDYGIGHNV 363


>gi|332974684|gb|EGK11601.1| ATP phosphoribosyltransferase [Kingella kingae ATCC 23330]
          Length = 336

 Score = 83.7 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 57/327 (17%), Positives = 111/327 (33%), Gaps = 30/327 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD   +  R    + + I  ++  +GF+ +  PL+EYSDSL   + +    +  
Sbjct: 5   QLPEHIADILPERARQIESVKEQILALFRVHGFELVHPPLMEYSDSLLTHIDNG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +A+  A          R    G V   +  G    R+ 
Sbjct: 63  TIRVPDQLSGRQLGIRADITPQVAQIDAHLLSQNQGINRLCYSGSVLHAKPDGFLTTREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q   +  G +   AD E+  +M  +L+  G+  ++  + + +  +   I     L    
Sbjct: 123 FQTSTELYGCADTVADIELIDLMLKSLKMGGL--DNVILSLGHIGMFRAIATAAQLDTAQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 I+            + V+ L    + D+    T    L  E             
Sbjct: 181 SQQLLAIM-------QNKDREAVRELAQSWQLDDIW--TNALALLPEL---------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +      +    +  +  + L  +        + +  + I    VR   Y+TG +Y 
Sbjct: 223 REIVETARTKLPQLTSITQALDSLAQVCT-----AFPAQAVHIDLAEVRVDNYHTGLLYA 277

Query: 309 AILG--FPVMNEKQKPVVFGSVGGGGR 333
           A        +    +    G   G  R
Sbjct: 278 AYTPDYHDAVAHGGRYDGLGQYFGRSR 304


>gi|294010169|ref|YP_003543629.1| ATP phosphoribosyltransferase regulatory subunit [Sphingobium
           japonicum UT26S]
 gi|292673499|dbj|BAI95017.1| ATP phosphoribosyltransferase regulatory subunit [Sphingobium
           japonicum UT26S]
          Length = 376

 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 74/195 (37%), Gaps = 11/195 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL---GKFLPDEDRPN 67
           LP G +D           +   + +   ++G++ +  P+ E+ D+L    K +  +D   
Sbjct: 9   LPEGLSDRLPPLAEASAWLARRVLDTVASHGYERVMPPIAEFEDTLVSRLKSMKAQDLVR 68

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                  D    + ++LR D+TA + R  A        P R    GPV R   +     R
Sbjct: 69  A-----IDPVSQRSLALRPDMTAQVGRIAATRLAAAPRPLRLSYAGPVIRLRANQLRPER 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q   + +GS +  A  E+  +  + L+A G+      I      ++D +        
Sbjct: 124 ERFQIGAELIGSDSVAAAVEIVNVAIEALQAAGVTG--ITIDFTLPDLIDALAAGPLPLA 181

Query: 187 DDKLNERLIVLRAID 201
            +++      L A D
Sbjct: 182 PEEIEAVRAELDAKD 196


>gi|148557576|ref|YP_001265158.1| tRNA synthetase, class II (G, H, P and S) [Sphingomonas wittichii
           RW1]
 gi|148502766|gb|ABQ71020.1| tRNA synthetase, class II (G, H, P and S) [Sphingomonas wittichii
           RW1]
          Length = 382

 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 73/195 (37%), Gaps = 11/195 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL---GKFLPDEDRPN 67
           LP G  D    +    +R+L  +      +G+  +  PL E+ + L    K     D   
Sbjct: 19  LPEGLRDRLPPQAEAGSRLLHRVIVAIGRHGYARVSPPLAEFEEGLVGQLKSAGARD--- 75

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
             +    D    + ++LR D+TA + R  A        P R    GPV +         R
Sbjct: 76  --LLRFVDPVSQRTLALRPDITAQVGRIAATRMGHRPRPLRLAYGGPVLKLRATQLRPER 133

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q   + +G+ +  A  E+  +  + LE  G+      + +    +++ +        
Sbjct: 134 ELTQAGAELIGTDSLAAVIEILRVAVEALEVAGVTG--ITVDLTLPDLVETLAAGAMPLP 191

Query: 187 DDKLNERLIVLRAID 201
            DK++    +L A D
Sbjct: 192 ADKVDAARAMLDAKD 206


>gi|326438140|gb|EGD83710.1| hypothetical protein PTSG_11464 [Salpingoeca sp. ATCC 50818]
          Length = 687

 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 96/248 (38%), Gaps = 30/248 (12%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           ++ D   S+ +  E +      ++G +E+ ++ +  +        +    ++ RGL+YYT
Sbjct: 468 MTNDALVSLLQSDERLMANPLAKEGVDEIALLIKYCKHFA-ADKAVSFDMSLARGLDYYT 526

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNVPATGFSIGISRLIVA 361
           G +YEA+L              GSV GGGRYD LV  F    + VP  G S+G+ RL   
Sbjct: 527 GVIYEAVLVGQ---------RVGSVAGGGRYDDLVGMFDKKGRKVPCVGVSLGVERLFTI 577

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++  E                +      + +       L  AG  AE          N  
Sbjct: 578 IEERERKAAEKSLKTRHTQVLVASGQGMVEERLELCAALWAAGFAAETSYKRKSKLLNAF 637

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           + A+    P+ ++ G  E  RG+++++  A  +E                    I   +L
Sbjct: 638 QEAEESAIPVVVLVGPDELQRGVVKVRHTATREEE------------------EIAREDL 679

Query: 482 VSTVKKIL 489
           V  +K +L
Sbjct: 680 VDRLKTLL 687


>gi|256005276|ref|ZP_05430242.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|255990712|gb|EEU00828.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316939553|gb|ADU73587.1| prolyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 572

 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 71/547 (12%), Positives = 148/547 (27%), Gaps = 78/547 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         R+  +I   +R   +  G   +    L  ++S     
Sbjct: 26  MLRAGLMR-KLASGIYSFLPLGYRVFRKIEQIVREEMDRAGAQELIMSALLPAESYQAS- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DL---TA-PLARYVAENFDTIVFPCRTYRIGP 113
              +     +F L+D +G+   L     ++   T   + R        +      YR   
Sbjct: 84  GRWEVFGAEMFRLKDRNGRDFCLGPTHEEIFTETVKSVTRSYRSLPLILYQIQTKYRDER 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK------------ 161
             R        F        D   +  + +  +M        + +G+             
Sbjct: 144 RPRFGVMRSREFVMKDAYSFDRDEAGLDISYKKMYDAYCRIFDRLGLDYIIVDADTGAMG 203

Query: 162 ---RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK-------LDKFGLQGV 211
                ++ +     +      E  G   +D+  E +      DK       L+K     V
Sbjct: 204 GSGSQEFMVKSAVGESRIAYCEACGYAANDEKAECVPEKCCDDKECCGELGLEKVATPDV 263

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           + +    +            L  +  D +V+ +     +      + + G I  E    E
Sbjct: 264 RTIEELMQFFGCSAKEFAKTLIYKADDKVVAAMVRGDRELNETKLQNLLGCIELEMADAE 323

Query: 272 -----------------------LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                                  + +    ++     +N        V     +     +
Sbjct: 324 TVEKVTGAAVGFAGPIGLDIDIVVDLEVAEMKNFVVGANETGFHYKNVNINRDFKPKYVK 383

Query: 309 AILGFPVMNEKQKPVVFGSV--------------GGGGRYDGLVSRFKGQNVPAT--GFS 352
            I      +   K      V                    D +     G+  P     + 
Sbjct: 384 DIRTIKEGDACPKCGAPVKVEFGIEVGHIFKLGTKYSEALDCIYLDETGKERPMIMGCYG 443

Query: 353 IGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           IGI+R + A+    +         +I     ++I     DS  +   +     L   GI 
Sbjct: 444 IGINRSMAAVIEQNNDENGIIWPISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMGIE 503

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +     +  G + K AD    P+ I  G      G+++ K   +    +   +   + 
Sbjct: 504 VLLDDRDER-PGVKFKDADLIGIPIRITVGKR-AGEGIVEYKLRREKDFAAIPYEEAIAK 561

Query: 467 REARVAQ 473
            +  VA+
Sbjct: 562 AKEEVAE 568


>gi|260549965|ref|ZP_05824180.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter sp.
           RUH2624]
 gi|260406957|gb|EEX00435.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter sp.
           RUH2624]
          Length = 388

 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 82/423 (19%), Positives = 149/423 (35%), Gaps = 60/423 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++  ++     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVIEKLRREAIDFLSVRGYQLVYTPFIEYIESLSSLSESNQDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   +    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGIRADMTPQVARIDA-HVRPVEGVARYCYAGTVLHTKPQNFNATRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   +E     +   H+ + +  +   +++  GL  +++
Sbjct: 128 QLGAELYGHDSIEADVEMVDVMLGLIENAYTLQG-AHLDLGHVGLFRSLVKYAGLSKNEE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    +  N G         +  ++ + + LS D+ 
Sbjct: 187 HELSDLYQR----------KALPELAEFTQNLNMGSDFYALGRYASDLEALQTHLSTDIL 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K +     L           N L    E ++   + +  + I    +R   Y+TG +Y  
Sbjct: 237 KDVEFDAAL-----------NALKTTLEQIKNR-WPALNVGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  +  PATGFS         L +L +  
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSCD-------LYALGA-- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            N       ++     D+D L          R  G+R    LG+  N G+          
Sbjct: 325 -NQFAEIETVVAPKGTDADLLKA---IANA-RLQGLRVVQLLGND-NLGS---------I 369

Query: 430 PLA 432
           P A
Sbjct: 370 PYA 372


>gi|94272029|ref|ZP_01292055.1| Anticodon-binding [delta proteobacterium MLMS-1]
 gi|93450264|gb|EAT01533.1| Anticodon-binding [delta proteobacterium MLMS-1]
          Length = 131

 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 19/143 (13%)

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            ++P  GF++G+ RL++ L++    T    E     +        +           R  
Sbjct: 7   PDLPGIGFAMGMERLVLLLQNQRRLTPPGPE-----LFIAALGEAAADLAFALLHNCRRQ 61

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G+RA M +   +   NQ+K ADR      +I G  E +RG   ++D+    E    + + 
Sbjct: 62  GLRAVMDV-QGRGLKNQMKQADRLGAAHVLIIGEDELNRGRATLRDMGSKLETDVLLSDE 120

Query: 464 ESWREARVAQITIPISELVSTVK 486
                         +SEL++T++
Sbjct: 121 -------------DLSELIATIR 130


>gi|302421382|ref|XP_003008521.1| serine/threonine-protein kinase gcn2 [Verticillium albo-atrum
            VaMs.102]
 gi|261351667|gb|EEY14095.1| serine/threonine-protein kinase gcn2 [Verticillium albo-atrum
            VaMs.102]
          Length = 1616

 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 77/482 (15%), Positives = 157/482 (32%), Gaps = 62/482 (12%)

Query: 19   PTKEIRIRNR--ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD 76
               +  + N+  +  ++ +I+  +G   +E P    S    +     D        L D 
Sbjct: 1027 LPSQADLLNQNIVKKALISIFRRHGA--LEMP---RSCLYPRSSHYADNV----VRLLDS 1077

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L YDLT   AR +A+   +                +  G  +    +  D+   
Sbjct: 1078 SGTVLQLPYDLTMGHARALAKQSGSPAIQRTFTFGNIFRDRQDTGQPQMLGEVDFDIVTT 1137

Query: 137  GSSAETADAEMCMMMADTLEAVGI--KRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
             +          + + D + +             I + ++L  I E   +    +     
Sbjct: 1138 DTLDLALKEAEVLKVLDEIVSTFPSLSSTQMCFHIGHSELLQLIFEYCRVEPSSRRAAAD 1197

Query: 195  IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMH 253
            ++ +    +  F  Q ++  L           +    ++S  +D +  F   D   K+  
Sbjct: 1198 VLSKL--NIHGFTWQKIRTELR----------SPLVGVSSTSVDELQRFDFRDTPSKAFS 1245

Query: 254  ELYELVKGTIAGEKGF---NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +L  L +G+   ++       L  +SE  ++ G  S         ++   Y  G ++  +
Sbjct: 1246 KLKTLFEGSDTYQQASSTLAHLKEVSEYAKRLGVVSKIYVNPLNSLKESFYTGGILFSCL 1305

Query: 311  LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF------KGQNVPATGFSIGISRLIVA--- 361
                + +             GGRYD L+         + +   A GF++   +L      
Sbjct: 1306 YDKKMKD---------VFAAGGRYDSLIKEHRPKVGGQYEERHAVGFNLAWEKLARVPKT 1356

Query: 362  -----LKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSK 415
                 LK  E  + +I       +     D+    +      Q+L    + AE+    S+
Sbjct: 1357 GGKAFLKKTEEESQSIFTARRCDVLIASFDAAVLRTTGVEILQILWAHNVSAELA-KDSR 1415

Query: 416  NFGNQL-KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI--KNNESWREARVA 472
            +  + L KY D       +I     +   ML++K L K      +I      SW  A + 
Sbjct: 1416 SPEDLLSKYRDDS-YSWVVII----KQDAMLKVKSLGKKDVPDVDIAMAQLLSWLRAEIR 1470

Query: 473  QI 474
            + 
Sbjct: 1471 ER 1472


>gi|310792426|gb|EFQ27953.1| hypothetical protein GLRG_03097 [Glomerella graminicola M1.001]
          Length = 1617

 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 68/481 (14%), Positives = 156/481 (32%), Gaps = 51/481 (10%)

Query: 15   FADCPT--KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
              +     +++  ++ + +++ +I+  +G         + +    +         + V S
Sbjct: 1022 MHETSPTQEDLLNQSIVKETLISIFRRHGALEC-----QRTCLYPRSA----HYAENVVS 1072

Query: 73   LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR---QFI 129
            L D +G  + L +DLT   AR +A          RT+  G VFR++      +       
Sbjct: 1073 LLDSNGTVLQLPFDLTMGHARMLA-KGSGTPGVQRTFTFGNVFRDKGDTGQPYMLGEVDF 1131

Query: 130  QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                 N    A      + ++         +  +     + +  +L  I +   +    +
Sbjct: 1132 DIVTTNTLDLALKEAEVLKVLDEIIATFPSLSSSQMCFHLGHSDLLQLIFDYCRVEHGSR 1191

Query: 190  LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
                 ++ +    +  +  Q +++ L           +    L++  +D +  F   D  
Sbjct: 1192 RAVADVLSKL--NIHHWTWQKIRVQLR----------SPLVGLSATSVDELQRFDFRDTP 1239

Query: 249  EKSMHELYELVKGTIAGEKGF---NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             K+  +L  + +GT   ++       L  +SE  ++ G  S         ++   Y  G 
Sbjct: 1240 SKAFSKLKTIFEGTDMYQRASSTLAHLREVSEYAKRLGVASKIYVTPLNSLKESFYTGGI 1299

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL------- 358
            ++  +    V +       + S+             + +   A GF++   +L       
Sbjct: 1300 LFSCLYDKKVKDVFAAGGRYDSLIRENC---PRIGSQYEERHAVGFNLSWEKLSRPPKSG 1356

Query: 359  --IVALKSLESSTNNIKEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSK 415
                  KS E S N   ++          D+ +L S      Q L +  I AE+    ++
Sbjct: 1357 GKAFLKKSEEESYNIFNKVKRCDALVASFDAAALRSTGIEILQTLWSHNISAELA-KDAR 1415

Query: 416  NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREARVAQ 473
            +    L           II          L++K + K    ++   +    SW    + +
Sbjct: 1416 SPEELLSRNRDEGYSWIIIIKQDAI----LKVKTMDKKDIPDVDIPMAQLFSWLRGEIRE 1471

Query: 474  I 474
             
Sbjct: 1472 R 1472


>gi|114707388|ref|ZP_01440285.1| prolyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114537269|gb|EAU40396.1| prolyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 440

 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 50/485 (10%), Positives = 123/485 (25%), Gaps = 79/485 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++ N++   IR      G + +  P ++ +D L +     D  
Sbjct: 31  MIRQQAAGLYTFLPLGLKVLNKVCAIIREEQNRAGANELLMPTIQSAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  + D   + +       ++   + R    ++ ++                     
Sbjct: 90  GEEMLRITDRHKRDLLYGPTNEEMVTDIFRSYVRSYRSLPL------------------- 130

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
                                  +  +     + V  +           K          
Sbjct: 131 ----------------------NLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDFE 168

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                     +  LR  D+     +  ++   G    + S +F   A+    ++     +
Sbjct: 169 SAQTAYHRMFVSYLRTFDRCGLQAI-PMRADTGPIGGNLSHEFIILASTGESEVFCHRDY 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L +++     +  +  +     EK        +     +    +    ++          
Sbjct: 228 LGMEIPSEAIDFDDAGQLASIVEK-------WTTPYAATDEMHDETAWNTVPANHQLNAR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F                     DG        +       +  + +     
Sbjct: 281 GIEVGHIFYFGTKYSAAMNAAVTGP------DGKDVPVHMGSYGIGPSRLVAAAIEAFHD 334

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                         V +  M   D++  +  +   + ++ AGI         +  G    
Sbjct: 335 EAGIIWPRSIAPFDVGLINMKPGDAECDAACEKIYEEMKQAGIDVLYDDQEGRAGGK-FA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
             D    P  +I G      G  ++KD A G                  A+ TIP+ +++
Sbjct: 394 TMDLIGLPTQVIIGPRGAKSGEAEVKDRASG------------------ARETIPMDQVI 435

Query: 483 STVKK 487
           + VK 
Sbjct: 436 AKVKA 440


>gi|254384426|ref|ZP_04999768.1| hypothetical protein SSAG_04070 [Streptomyces sp. Mg1]
 gi|194343313|gb|EDX24279.1| hypothetical protein SSAG_04070 [Streptomyces sp. Mg1]
          Length = 440

 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 72/449 (16%), Positives = 135/449 (30%), Gaps = 41/449 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LPRGF+D   +E           R++  ++GF P+    + Y+++  +F          +
Sbjct: 8   LPRGFSDLVGEEAAQGVWAESMFRSVTRSFGFAPVTVAPVGYAETFEQFGS---AATGRI 64

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT-YRIGPVFRNEKHGPGRFRQFI 129
           F+ +D  G+ ++L  D    + R +A +               P+ R  +     + Q +
Sbjct: 65  FAFEDLSGRRLALTADSLVAVLRALAGSGRLTGGASALGAACVPIARYRRKRHRGWSQAV 124

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
               +     A  AD  +  + A+  E +G       +   +  +LD I    GL     
Sbjct: 125 AVICNEADELA--ADLTLLRLWAELFEVLGPAAG-GRLEYCDYGVLDAIAADEGLSPAAA 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID-------IMVS 242
            N      R             ++L      D+      G    +E            + 
Sbjct: 182 RNALHHRRRGPAPEAGEPRAAEQVLPPGEPRDDEQVLPPGGPREAEPAPPSPAGFLRRLD 241

Query: 243 FLSIDLEKS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            LS              +        +    L  +  +  + G    R++ +       E
Sbjct: 242 RLSELCRGLPPREAPDRVAAAEPVTGERMAHLRTVLAIAHELG---VRVEFALDWEHAPE 298

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           Y  G  + A           +     ++G GG Y  +V                 S  + 
Sbjct: 299 YQAGLCFLA-----------RTGDGRTLGDGGGYHHMVRTLDI----GLSSCWSTSASVN 343

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L  L              +  M   S  L  +    + LR AG    +     +  G Q
Sbjct: 344 LLAELGPVP------DAECVHLMRMPSADLRTFMAVARRLRGAGYDV-LEHWQPRRLGRQ 396

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L+    R      + G  E + G L +++
Sbjct: 397 LRRVPARPSQWFALVGEKEAASGRLTLQN 425


>gi|94496032|ref|ZP_01302611.1| ATP phosphoribosyltransferase [Sphingomonas sp. SKA58]
 gi|94424724|gb|EAT09746.1| ATP phosphoribosyltransferase [Sphingomonas sp. SKA58]
          Length = 376

 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 3/152 (1%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G +D    +     R++  + +    +G++ +  PL E+ D+L + L       + +
Sbjct: 9   LPEGLSDRLPPQAEASARLVRRVLDTVATHGYERVMPPLAEFEDTLTQRL--TSMRAQDL 66

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             + D    + ++ R D+TA + R  A        P R    GPV R +       R+ +
Sbjct: 67  VRVVDPVSQRTLAFRPDMTAQVGRIAATRLAAAPRPLRLSYAGPVIRQKATQLRPEREKM 126

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
           Q   + +GS +  A  E+  +  + L+A G+ 
Sbjct: 127 QLGAELIGSDSVPAAVEIVNIAIEALQAAGVT 158


>gi|295106076|emb|CBL03619.1| prolyl-tRNA synthetase, family II [Gordonibacter pamelaeae
           7-10-1-b]
          Length = 585

 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 60/522 (11%), Positives = 127/522 (24%), Gaps = 70/522 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  ++   +R   +  G   I  P L+  + L       +  
Sbjct: 37  MIRKTASGVYTFLPLGKRVLAKVERIVREEMDAIGSQEIMMPALQPGE-LWHESGRWNDY 95

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR------IGPVFRN 117
              +  L D   +   L     +L   L R    ++  +       +      I P F  
Sbjct: 96  GPELMRLVDRHDREFCLGPTHEELITALVRNELRSYKELPLTLYQIQVKFRDEIRPRFGL 155

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR---NDYHIGINNRKI 174
            +      +                 D             +  +    +   IG +    
Sbjct: 156 LRSREFIMKDAYSFHASQESLQKTYDDMSAAYGRICERMDMDYRPVEADSGQIGGSVTCE 215

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT- 233
              + E                  A D L +  +  V  +               A L  
Sbjct: 216 FMALAEAGEAELVHCACGWAANAEAGDCLARPTVYDVPAMEKVATPGVHTIAELAAFLDI 275

Query: 234 ------------SEQIDIMVSFLSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVR 280
                       ++  D++V F+  D E   +         T+  ++      +    + 
Sbjct: 276 PESSTVKALSGKNDAGDLVVLFIPGDHELNELKAERVAGGFTLLTDEDMEAFGLHKGSMG 335

Query: 281 KSGYNSN---------RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG- 330
             G             +      +    + Y     +  + F V       +V       
Sbjct: 336 PVGLPEAARVIAARSLQAVPKWVVGANEDGYHYVGAQLGVDFKVDEWADLCIVQPGDSCP 395

Query: 331 --------------------GGRYDGLVSRFKG------QNVPATGFSIGISRLIVALKS 364
                               G +Y   +           Q      + +G+SR + A+  
Sbjct: 396 KCGLPLEGARGIEVSQVFQLGDKYSKAMGATFMAEDGSEQPFLMGCYGVGVSRTMAAIVE 455

Query: 365 L---ESSTNNIKEMGPVLITTMD---HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
               E+       + P  +  +     D +     +     L   G+   +     +  G
Sbjct: 456 QHNDENGIAWPFSVAPAHVCVLPLTVGDDEVQPAAEKLAGDLAKLGLEVVIDDRKERA-G 514

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
            +   AD    PL ++ G    + G ++IK    G      +
Sbjct: 515 VKFADADLVGWPLQVVVGKRGLAEGKVEIKHRKTGARRDISL 556


>gi|222529469|ref|YP_002573351.1| tRNA synthetase class II (G H P and S) [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456316|gb|ACM60578.1| tRNA synthetase class II (G H P and S) [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 393

 Score = 83.3 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 131/412 (31%), Gaps = 55/412 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK          F D           + +    +++ +G+  +E    E  +      
Sbjct: 1   MSKK----------FVDYYPPVSDTLEEVRERTIFLFKKFGYKLVEPSTFEDYEKSKNLN 50

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                         D DG  I+LR + T  +A  +A  F T V+P +    G  ++  + 
Sbjct: 51  GSNTI------KFMDSDGNVIALRNEFTPKVA-EIAAKFQTKVYPLKLCYFGKAYQFLQQ 103

Query: 121 GPGRFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
             G  R+F Q  ++N  +S       E+  +  ++L  +G+  N++ I +       GI 
Sbjct: 104 EAGDLREFFQAGIENFHTSDSFYIDLEILALAVESLLELGV--NNFTIDVGEVNFFKGIA 161

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +   +                        + +  L+ +       +F     ++ + IDI
Sbjct: 162 KDCEIDE-------------------ASSEVLCKLVDKKDYIGIENFLIRKGISQKVIDI 202

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
             +   +   +   +  +        +     L  I   + K GY  N I I   +V+ L
Sbjct: 203 FRNLTRLYGREDKIKEAKKFANNEISKLAIERLSEIYNNMIKLGY-QNYITIDFGMVKHL 261

Query: 300 EYYTGCVYEAILGFPVMN--EKQKPVVFGSVGGGGRYD-------------GLVSRFKGQ 344
            YYTG ++   +           +      + G   Y               L +  +  
Sbjct: 262 NYYTGIIFSGYIQELGYPVLNGGRYDNLCEIFGTKLYAIGFAIGLDRILEWKLKNIPRND 321

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
               +          +ALK L  + N  +++    +     ++  +SK    
Sbjct: 322 KFYDSLVFYKEGHFKMALKLLLKTDNEKQKIYFYTVPAKIEEAFLISKAMKV 373


>gi|114775664|ref|ZP_01451232.1| ATP phosphoribosyltransferase regulatory subunit [Mariprofundus
           ferrooxydans PV-1]
 gi|114553775|gb|EAU56156.1| ATP phosphoribosyltransferase regulatory subunit [Mariprofundus
           ferrooxydans PV-1]
          Length = 318

 Score = 83.3 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 125/356 (35%), Gaps = 40/356 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           + A    G  D      R    +   + +++    ++ +  P++E  D+L          
Sbjct: 1   MTARPIIGLDDAFGARARELRELQRRLLDLFAEADYEEVIPPIVERPDALKSGAGR--FL 58

Query: 67  NKGVFSLQDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
                   D  G   ++LR D+T  +AR  A    +     +    G +        G  
Sbjct: 59  ADQTVVFTDPAGAGLLALRSDMTPQIARIAATRLLS-EKVLKLSYSGTIMMARPELRGGS 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           RQ  Q  ++ +G +    DAE+  + A ++ A G    +  + + +  +L  ++    + 
Sbjct: 118 RQQWQTGIECLGIAGAHGDAEVMHLAARSMLAAGFT--NPVLQVGHIGLLKALVAGSSMP 175

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D      L+  R+ D L     +                      L+      ++    
Sbjct: 176 LDK--WTALVNRRSPDDLKHAMREET--------------------LSEPVRKALLELTG 213

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              +++  E      G    E+  +EL+V+   V +       +   + ++    Y++G 
Sbjct: 214 GMADRNWIEANRQAFGAD-FERAADELLVLVAEVGERMEGDVHVYADAGVMPRFLYHSGI 272

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           ++                V  ++  GGRYD +++    +++PATGFS  +   + A
Sbjct: 273 LF----------AGYAEGVAHALLHGGRYDAMMAAHG-RDMPATGFSCDLWAWLDA 317


>gi|281419389|ref|ZP_06250404.1| prolyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281407009|gb|EFB37272.1| prolyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 572

 Score = 83.3 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 71/547 (12%), Positives = 148/547 (27%), Gaps = 78/547 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         R+  +I   +R   +  G   +    L  ++S     
Sbjct: 26  MLRAGLMR-KLASGIYSFLPLGYRVFRKIEQIVREEMDRAGAQELIMSALLPAESYQAS- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DL---TA-PLARYVAENFDTIVFPCRTYRIGP 113
              +     +F L+D +G+   L     ++   T   + R        +      YR   
Sbjct: 84  GRWEVFGAEMFRLKDRNGRDFCLGPTHEEIFTETVKSVTRSYRSLPLILYQIQTKYRDER 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK------------ 161
             R        F        D   +  + +  +M        + +G+             
Sbjct: 144 RPRFGVMRSREFVMKDAYSFDRDEAGLDISYKKMYDAYCRIFDRLGLDYIIVDADTGAMG 203

Query: 162 ---RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK-------LDKFGLQGV 211
                ++ +     +      E  G   +D+  E +      DK       L+K     V
Sbjct: 204 GSGSQEFMVKSAVGESRIAYCEACGYAANDEKAECVPEKCCDDKECCGELGLEKVATPDV 263

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           + +    +            L  +  D +V+ +     +      + + G I  E    E
Sbjct: 264 RTIEELMQFFGCSAKEFAKTLIYKADDKVVAAMVRGDRELNETKLQNLLGCIELEMADAE 323

Query: 272 -----------------------LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                                  + +    ++     +N        V     +     +
Sbjct: 324 TVEKVTGAAVGFAGPIGLDIDIVVDLEVAEMKNFVVGANETGFHYKNVNINRDFKPKYVK 383

Query: 309 AILGFPVMNEKQKPVVFGSV--------------GGGGRYDGLVSRFKGQNVPAT--GFS 352
            I      +   K      V                    D +     G+  P     + 
Sbjct: 384 DIRTIKEGDACPKCGAPVKVEFGIEVGHIFKLGTKYSEALDCIYLDETGKERPMIMGCYG 443

Query: 353 IGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           IGI+R + A+    +         +I     ++I     DS  +   +     L   GI 
Sbjct: 444 IGINRSMAAVIEQNNDENGIIWPISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMGIE 503

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +     +  G + K AD    P+ I  G      G+++ K   +    +   +   + 
Sbjct: 504 VLLDDRDER-PGVKFKDADLIGIPIRITVGKR-AGEGIVEYKLRREKDFAAIPYEEAIAK 561

Query: 467 REARVAQ 473
            +  VA+
Sbjct: 562 AKKEVAE 568


>gi|302339626|ref|YP_003804832.1| tRNA synthetase class II (G H P and S) [Spirochaeta smaragdinae DSM
           11293]
 gi|301636811|gb|ADK82238.1| tRNA synthetase class II (G H P and S) [Spirochaeta smaragdinae DSM
           11293]
          Length = 362

 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 70/404 (17%), Positives = 143/404 (35%), Gaps = 47/404 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M        ++P G      +E      I   +  ++ ++G+ P ETP+ ++ D+    L
Sbjct: 1   MRDNQDRLLQIPLGTESFYLEEAYRHREITYKLHRLFASWGYLPAETPVFDFFDTYRHLL 60

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +     K ++ L D +G  + LR D+T  LA+ +         P R      + R++  
Sbjct: 61  NEN---KKHIYRLIDREGDLLMLRSDITLFLAKQMGLLLRQEDLPARVCYSDTILRHQNR 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                 +F Q   + +G      D E+ +++  T +++ +K     I I +R+++D I  
Sbjct: 118 EDISRNEFFQVGAELIGKEKIEGDLEILLLLLATFDSLHVKPL---IHIGSRRLVDAIFT 174

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +     +     +      D       + +K L G+          +      E     
Sbjct: 175 DLCSAERESAIADVRNRNRAD-----TAELLKKLYGKEAGSAIAAMLRFIGTPEE----- 224

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  +       +           A ++   E+  +  ++ +      +++I  + V    
Sbjct: 225 LKSIKPRFAAHL---------NAAAKQAMEEMEAMFTILERLNKVE-QLRIDFSEVGEQP 274

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V++A +               ++  GGRYD L+  F   N P+ GFSI + ++  
Sbjct: 275 YYTGIVFQAYIDTLD----------DAIASGGRYDKLLESFGF-NAPSAGFSIMLRKIEP 323

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            L         +                S  +     +  R AG
Sbjct: 324 LLGDDFLPPRPVTSDHY----------GSFEEAFKAAEKRRAAG 357


>gi|261885097|ref|ZP_06009136.1| histidyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 262

 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 99/261 (37%), Gaps = 20/261 (7%)

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
            +   +  L     +      +          I V     +  + + +   L+   +  E
Sbjct: 22  CMPKYRQKLISFIDEKKDQLCEDCRRRLVTNPIRVLDCKKEHCQILLKNAPLITENL-NE 80

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
           + ++E   + +++ K+G    + ++   +VRGL+YY    +E +          +     
Sbjct: 81  ECYSEFEQLKDILTKNG---VKFEVDGRLVRGLDYYCKTAFEFV--------SDEIGSKS 129

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
           +V GGGRYD LV    G++ PA G+++GI R++  LK  +             I     D
Sbjct: 130 AVAGGGRYDRLVDFLGGKSTPAVGWAMGIERIMEILKQKD------MPNSRDGIYICALD 183

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              + +       LR    + E+    +K+    L  AD++   L +  G  E   G + 
Sbjct: 184 KKYIDEIYKIGFKLRK-NYKVEISY-EAKSPNKHLNLADKKFAQLFLCMGEDEAKNGEIW 241

Query: 447 IKDLAKGKELSREIKNNESWR 467
            K+L    E   +I N E   
Sbjct: 242 YKNLENKNEKRIKILNLEGEL 262


>gi|125975428|ref|YP_001039338.1| prolyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|152016597|sp|A3DJL6|SYP_CLOTH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|125715653|gb|ABN54145.1| prolyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
          Length = 572

 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 71/547 (12%), Positives = 147/547 (26%), Gaps = 78/547 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         R+  +I   +R   +  G   +    L  ++S     
Sbjct: 26  MLRAGLMR-KLASGIYSFLPLGYRVFRKIEQIVREEMDRAGAQELIMSALLPAESYQAS- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DL---TA-PLARYVAENFDTIVFPCRTYRIGP 113
              +     +F L+D +G+   L     ++   T   + R        +      YR   
Sbjct: 84  GRWEVFGAEMFRLKDRNGRDFCLGPTHEEIFTETVKSVTRSYRSLPLILYQIQTKYRDER 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV--------------- 158
             R        F        D   +  + +  +M        + +               
Sbjct: 144 RPRFGVMRSREFVMKDAYSFDRDEAGLDISYKKMYDAYCRIFDRLGLDYIIVDADTGAMG 203

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK-------LDKFGLQGV 211
           G    ++ +     +      E  G   +D+  E +      DK       L+K     V
Sbjct: 204 GSDSQEFMVKSAVGESRIAYCEACGYAANDEKAECVPEKCCDDKECCGELGLEKVATPDV 263

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           + +    +            L  +  D +V+ +     +      + + G I  E    E
Sbjct: 264 RTIEELMQFFGCSAKEFAKTLIYKADDKVVAAMVRGDRELNETKLQNLLGCIELEMADAE 323

Query: 272 -----------------------LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                                  + +    ++     +N        V     +     +
Sbjct: 324 TVEKVTGAAVGFAGPIGLDIDIVVDLEVAEMKNFVVGANETGFHYKNVNINRDFKPKYVK 383

Query: 309 AILGFPVMNEKQKPVVFGSV--------------GGGGRYDGLVSRFKGQNVPAT--GFS 352
            I      +   K      V                    D +     G+  P     + 
Sbjct: 384 DIRTIKEGDACPKCGAPVKVEFGIEVGHIFKLGTKYSEALDCIYLDETGKERPMIMGCYG 443

Query: 353 IGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
           IGI+R + A+    +         +I     ++I     DS  +   +     L   GI 
Sbjct: 444 IGINRSMAAVIEQNNDENGIIWPISIAPYHVIVIPVNTTDSVQMELAEKIYTQLGEMGIE 503

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +     +  G + K AD    P+ I  G      G+++ K   +    +   +   + 
Sbjct: 504 VLLDDRDER-PGVKFKDADLIGIPIRITVGKR-AGEGIVEYKLRREKDFAAIPYEEAIAK 561

Query: 467 REARVAQ 473
            +  VA+
Sbjct: 562 AKKEVAE 568


>gi|153009733|ref|YP_001370948.1| prolyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|166980136|sp|A6X1L5|SYP_OCHA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151561621|gb|ABS15119.1| prolyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 442

 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 57/452 (12%), Positives = 120/452 (26%), Gaps = 61/452 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++ D IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCDIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           QD   + +       ++   + R    ++  +      Y I   FR+E        +  +
Sbjct: 97  QDRQERDMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S     +          +  +             R  L  I            
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFA---------RVGLQAI------------ 193

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               ++   G    D S +F   A     Q+    ++L +    
Sbjct: 194 -------------------PMRADTGPIGGDLSHEFIILAETGESQVFCDKAYLDL---- 230

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                   V G     +   +L  I          ++ +   +   +             
Sbjct: 231 -------AVPGADTDFRNDAQLTDIVNRWTTPYAATDEMHDEADWSKVKPEDQVSARGIE 283

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +G       +     G+   G   DG        +       +  + +            
Sbjct: 284 VGHIFHFGTKYSEPMGAKVQGP--DGKEHLVSMGSYGIGPSRLVAAAIEAFHDDAGIIWP 341

Query: 371 NIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                    I  M   D    +  +   + L  AG+   +     +  G +    D    
Sbjct: 342 KAIAPFGAGIVNMKPGDEGCDAVSEKIYEALTNAGVDPLLDDTDDR-PGAKFATMDLIGL 400

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           P  +I G    + G ++IKD   G+  S  ++
Sbjct: 401 PTQVIVGPRGVAAGEVEIKDRKTGERQSLSVE 432


>gi|167756246|ref|ZP_02428373.1| hypothetical protein CLORAM_01777 [Clostridium ramosum DSM 1402]
 gi|167703654|gb|EDS18233.1| hypothetical protein CLORAM_01777 [Clostridium ramosum DSM 1402]
          Length = 338

 Score = 83.0 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 70/365 (19%), Positives = 134/365 (36%), Gaps = 42/365 (11%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K  + +  +P    D     +     I +S+R I+    ++ +  P  EY D   +   
Sbjct: 11  NKMEEFKYLIPEESIDAIITNVSKLREIENSLRAIFAKNNYNEVLMPSFEYVDLYTQL-- 68

Query: 62  DEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           D     + +F   + +G+ +++R D T PLAR+ + N +      R    G V+R E   
Sbjct: 69  DCGFEQEKMFQYINHEGKNVAMRCDFTIPLARFYSTN-NYGDEEARYCYFGKVYRKETMH 127

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            GR  +F Q  V+ +       D E   M+ ++L  +G+K     IG            +
Sbjct: 128 KGRSSEFFQGGVELINKPGIAGDKECLNMIQESLPHLGLKNILVEIGSAR------FFNR 181

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +     DK  E   +L+  D      +  +K  + +   D   +            ++++
Sbjct: 182 LCTLVGDKAVELTEILKYRD------ISEMKKFVADNEFDGQLN------------ELLL 223

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
              +   + ++ +            K    L  +   +     N   I     +V  ++Y
Sbjct: 224 KLPTAFGDITLLDTAIKGINDEILLKALERLKELYNSLD----NKESIIFDLGMVPTMKY 279

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           YTG + +                   +  GGRYD L+ RF  +NV A GF   ++ ++ A
Sbjct: 280 YTGLMIKGYSDKSAQ----------PIISGGRYDDLLPRFN-KNVGAIGFCYHMNHILKA 328

Query: 362 LKSLE 366
           +    
Sbjct: 329 IDKQG 333


>gi|149917775|ref|ZP_01906270.1| ATP phosphoribosyltransferase regulatory subunit [Plesiocystis
           pacifica SIR-1]
 gi|149821295|gb|EDM80697.1| ATP phosphoribosyltransferase regulatory subunit [Plesiocystis
           pacifica SIR-1]
          Length = 442

 Score = 83.0 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 90/428 (21%), Positives = 160/428 (37%), Gaps = 45/428 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D      R R    + +  ++E +G+  I  PLLEY +   + L   D   + V
Sbjct: 24  LPIGARDLLPTTSRRRRSNRERLLRVFEGWGYREITPPLLEYFEVHARGL-SADMAERCV 82

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAEN--FDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             ++   G  ++LR D+T  +AR +A+    +                   HG     + 
Sbjct: 83  RFIEAGTGDVVALRSDVTPQIARVIAQRVGGEVEAGDQVRLCYAATSVRLPHGRHDRSEL 142

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  V+ VG     ADAE+  +  + L A+G     +   +++  +   ++  + L    
Sbjct: 143 HQVGVECVGEQTPWADAELIGLADEALSALGSTA--HRFDLSHTGVGRKLIAGLDLPKAV 200

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                               + ++  LG        D   G+     Q+D +     +  
Sbjct: 201 A-------------------KELRARLGRKDRGGVVDLL-GSRCAPAQVDAVAELCELYG 240

Query: 249 EKS-MHELYELVKGTIAGE--KGFNELVVISELVR-KSGYNSNRIKISSTIVRGLEYYTG 304
             + +    EL+ G  AGE      EL  + E+V+ ++   + R+ +    VRG +YYTG
Sbjct: 241 PPAILDRARELLAGVDAGEARAALEELRAVVEVVQRQTPAVAERLLVDLGEVRGFDYYTG 300

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                            P     V  GGRYD +++R+    +PA+G +I +  L  AL +
Sbjct: 301 LRMRV----------WAPGASEPVVRGGRYDDMLTRYG-ATLPASGLAIDLDALDEALMA 349

Query: 365 LESSTNNIKEMGPVLITTMDHDSDS---LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
            +S   +      +L       S +    ++       LR  G RA +   +     + L
Sbjct: 350 ADSGQADAAAPATMLAVQPGEPSGAGQRRARAAELAASLRRDGQRAWI--CAVAEVESAL 407

Query: 422 KYADRRNC 429
           + A RR  
Sbjct: 408 RQASRRGA 415


>gi|15806460|ref|NP_295167.1| ATP phosphoribosyltransferase regulatory subunit [Deinococcus
           radiodurans R1]
 gi|20978514|sp|Q9RUE3|HISZ_DEIRA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|6459205|gb|AAF11015.1|AE001989_3 histidyl-tRNA synthetase, putative [Deinococcus radiodurans R1]
          Length = 406

 Score = 83.0 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 58/396 (14%), Positives = 113/396 (28%), Gaps = 44/396 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    E   R  +   +  +  ++G+  ++ P LE +D                
Sbjct: 28  LPAGVRDVLPAEWERREHLRSHLSALLRSWGYRGVDLPALELADPAHPQGNHA------- 80

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           F L D  GQ ++LR + T  L R V  +F +  FP R    G ++           +  +
Sbjct: 81  FKLIDSGGQVLALRSEYTTALGRLVGTHFPSGPFPLRLQYGGRLWLR--TQTSELGRLRE 138

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
            +         T       ++A    A+G       + +     +D  L   GL G    
Sbjct: 139 FNQVGAELIGVTGVQADAELLALAHAALGQAGVQAQLEVGFPGFVDAALTDAGLPG---- 194

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD----FTKGANLTSEQIDIMVSFLSI 246
                               V+  L +     SG       +   ++ E    + S   +
Sbjct: 195 -------------------PVRAALHDAIDRKSGADLDLLARQHGVSPEVTRTLHSLTEL 235

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                +     ++   +  E+    L  +    +++G     +     + R   YYTG  
Sbjct: 236 YGGPEVLTEARVLARGVRAEQAVEHLSAVHAAAQEAG---VELLFDLGVSRRYGYYTGLT 292

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           + A +                   GG      +    +        +      V      
Sbjct: 293 FRAYVDGINQP---VLGGGRYALPGGLPGAGFAIGLERLAAVMPAGVPSEPETVLALDFA 349

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
           ++T          +     +++     Q   + LR 
Sbjct: 350 AATAARAAGLGAELAWTGDEAELRHYAQ--ARGLRR 383


>gi|159126309|gb|EDP51425.1| protein kinase (Gcn2), putative [Aspergillus fumigatus A1163]
          Length = 1592

 Score = 83.0 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 70/470 (14%), Positives = 140/470 (29%), Gaps = 49/470 (10%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ +++ + + +  I+  +G        +E +  +    P       G   L D  G  +
Sbjct: 995  ELLVQSLVKERLTAIFRRHG-------AVETTRQML--FPRSQHYRSGAVRLLDASGNQL 1045

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
             L +DLT P AR ++    ++               E       R   + D D V  +  
Sbjct: 1046 QLPFDLTLPNARSISRQDPSLEKTFAFG----TVYREMPHGSEPRTHKEVDFDIVSHNTL 1101

Query: 142  TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
                ++ +  A+ ++ +     ++         L        ++  D L   +   R   
Sbjct: 1102 ----DLALKEAEVIKVLDEIIEEF-------PPLRSSPMSFLINHSDLLQLIMEFCRITP 1150

Query: 202  KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                   + +  L     T         +         +      D   +  +    ++ 
Sbjct: 1151 SQVPLVKEIISKLNFGKWTMQKIRSELRSPAIGVASTSLDDLARFDFRDTPKQAQNRLRS 1210

Query: 262  TIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRGLEYYTGCVYEAILGFPVMNEKQ 320
             + G +    L  I   +           +     V  L       +   + F  + + +
Sbjct: 1211 IMEGTEFAERLSPIFARLNILVTYLQGFDVKRKVYVNPLGSLNDKFFRGSILFQCVFDTK 1270

Query: 321  KPVVFGSVGGGGRYDGLVSRFK------GQNVPATGFSIGISRLIVALKS---------- 364
            +  VF     GGRYD LV  F+           A GF++   RL  A+            
Sbjct: 1271 RRDVF---AAGGRYDRLVQEFRPKGRASCSQTHAVGFNLSWDRLSSAMLEYLKSTTKATT 1327

Query: 365  --LESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
               ES      +     +     D+    +      Q L  + I AE+ + +S +    L
Sbjct: 1328 KHAESDAGAFWKTRRCDVLVASFDATVLRTTGVKLVQHLWASDISAELAVDAS-SLEELL 1386

Query: 422  KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
                  N    +I     + RG  +++ LA  +EL         W    +
Sbjct: 1387 SEYKEHNHSWIVIAKQDSKERG-FKVRCLAPREELDIRSSELIPWLRNEI 1435


>gi|309379390|emb|CBX21957.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 383

 Score = 83.0 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 76/408 (18%), Positives = 137/408 (33%), Gaps = 49/408 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EYS SL   + D     K 
Sbjct: 5   QLPEHIADVLPTNARQLESARERLLALFRVHGYELVQPPLMEYSHSLLTHI-DAGLSLKT 63

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  +    G+ + +R D+T  +AR  A          R    GPV      G    R+ +
Sbjct: 64  ILVVDQLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHARPDGLSNMREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L     
Sbjct: 124 QAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQS 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                ++    DK  +     VK    +G    +                          
Sbjct: 182 ATLLALM---QDKDTRAVEAQVKAWKLDGMWAKAFSLLPRL---------------YGGR 223

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +      +    A     +EL  + +      +  + I I  + +R   Y+TG VY A
Sbjct: 224 EVLSAARGRLPDLSAVGNALDELQAVCDE-----FPDDEIHIDLSELRVDNYHTGLVYAA 278

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            +V  GGRYDGL   F  +  PATGFS  +   I  L ++E   
Sbjct: 279 YTSD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAIERQP 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                        +  D++     +   + LR  G    +  G   N 
Sbjct: 328 ------------AVSVDAEDAEAAREAIETLRAQGQCVVIDYGIGHNV 363


>gi|293399455|ref|ZP_06643608.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae F62]
 gi|291610024|gb|EFF39146.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae F62]
          Length = 383

 Score = 83.0 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 76/410 (18%), Positives = 137/410 (33%), Gaps = 53/410 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLPNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+       L    +K  D    + +   + GI   +      
Sbjct: 123 LQAGAEMYGFADIRGDIELI-----DLMLKSMKIADMGKVLLSLGHI-GIFRALSDAAHL 176

Query: 189 KLNERLIVLRAIDKLDKFGLQ-GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
              +   +L  +   D   ++  VK    +G    +                        
Sbjct: 177 DAGQSAALLALMQDKDTGSVEAQVKAWKLDGMWAKAFSLLPRL---------------YG 221

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + +    +    A     +EL  + +      +  N I I  + +R   Y+TG +Y
Sbjct: 222 GREVLSDARGRLPDLSAVGGALDELQAVCD-----AFPDNEIHIDLSELRVDNYHTGLLY 276

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E 
Sbjct: 277 AAYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAVER 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                          +  D++     +   + LR  G    +  G   N 
Sbjct: 326 QP------------AVSVDAEDAEAAREAVEALREQGQCVVIDYGIGHNV 363


>gi|84995122|ref|XP_952283.1| histidyl-trna synthetase [Theileria annulata strain Ankara]
 gi|65302444|emb|CAI74551.1| histidyl-trna synthetase, putative [Theileria annulata]
          Length = 416

 Score = 83.0 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 93/438 (21%), Positives = 166/438 (37%), Gaps = 64/438 (14%)

Query: 47  TPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLAR----YVAENFDTI 102
           TP +   D     + D++   K ++S +D  G+ +SLR D+T         Y +      
Sbjct: 15  TPKV-RIDDFNDKIQDKEHY-KELYSFKDKKGRNLSLRGDITPQFMNLLTSYYSNKKLQS 72

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETA----------DAEMCMMMA 152
               + Y I   +R E+ G GR R   Q + D VG    +           + E+  M+ 
Sbjct: 73  QNIYKWYTIADCWRYERPGLGRRRNHQQWNADIVGKPFTSQVLLGISDIQVEVELISMLI 132

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
              ++VG+   D  I +N+R  + GIL  +G               + D + +F      
Sbjct: 133 HFFKSVGLSYEDVVISLNHRNTIPGILALLGFSN-----------YSTDWIYQFS--KTL 179

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +   D   +       T +Q   +   +  +  K++ EL  +        +   EL
Sbjct: 180 DKCKKIPKDEFNELLLDLKFTPDQCSELDKII--ENSKTVEELEGIF-----NPEDIREL 232

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
             + +L+ + GY SN I I  TIVRG +YYTG V+E      + +         S+ GGG
Sbjct: 233 KQLVDLLAEKGY-SNWINIDLTIVRGNDYYTGLVFECFDRNQMHS--------RSIAGGG 283

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           RYD   +    +   + GF +G   ++  +K       N+K    + +     +S S + 
Sbjct: 284 RYDNYFNNCDPRLTYSAGFGMGNIAIMDLIKQKGL---NVKSEQLIDVLVFTPNSTSNNC 340

Query: 393 YQMY-----TQMLRTAGIR----AEMFLGSSKNFGNQLKYADRRNCPLAIIQ---GTGER 440
            Q         +L +   R      M L  S +    LK+ D       ++       E 
Sbjct: 341 EQKLETDSDQSLLCSKNQRMCLYNLMDLLRSNDLVKALKFGDNCMAKFVLMPLLRDGNEF 400

Query: 441 SRGMLQIKDLAKGKELSR 458
               + ++D+  G ++ +
Sbjct: 401 ----IVLRDMKTGLQVKK 414


>gi|6065914|emb|CAB58360.1| putative eIF2 alpha kinase [Homo sapiens]
          Length = 548

 Score = 83.0 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 85/433 (19%), Positives = 150/433 (34%), Gaps = 50/433 (11%)

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             D  G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C 
Sbjct: 3   FMDHSGMLVMLPFDLRIPFARYVARNN---ILILKRYCIERVFRPRKLDRFHPKELLECA 59

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGDDK 189
            D V S+  +      ++                           L  IL   G+  D  
Sbjct: 60  FDIVTSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKL 119

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--SID 247
               +I+  A+                +             +L+S  +  +  F+    D
Sbjct: 120 SQVYIILYDAV--------------TEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGD 165

Query: 248 LEKSMHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L+  M  +  L+K      +    G  +L  +  L++K G     IK+   I  GL Y  
Sbjct: 166 LQDLMPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLG-----IKLQVLINLGLVYKV 220

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVAL 362
                 I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I  +
Sbjct: 221 QQHNGIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKI 280

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +   +      +    +  +     S+S+    TQ L TAGI AE+    S++     +
Sbjct: 281 SAAVLNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQE 340

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           Y          +    E S   +++K   K ++  +                 +  +ELV
Sbjct: 341 YCRHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLETELV 382

Query: 483 STVKKILQENKEE 495
             V + L+    +
Sbjct: 383 DHVLQKLRTKVTD 395


>gi|312622297|ref|YP_004023910.1| histidine--tRNA ligase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202764|gb|ADQ46091.1| Histidine--tRNA ligase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 393

 Score = 83.0 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 64/412 (15%), Positives = 133/412 (32%), Gaps = 55/412 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK          F D           + +    +++ +G+  +E    E  +      
Sbjct: 1   MSKK----------FVDYYPPVSDTLEEVRERTIFLFKKFGYKLVEPSTFEDYEKSKNLN 50

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                         D DG  I+LR + T  +A  +A  F T V+P +    G  ++  + 
Sbjct: 51  GSNTI------KFMDSDGTVIALRNEFTPKVA-EIAAKFQTKVYPLKLCYFGKAYQFLQQ 103

Query: 121 GPGRFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
             G  R+F Q  ++N  +S       E+  +  ++L  +G+  N++ I +       GI 
Sbjct: 104 EAGDLREFFQAGIENFHTSDSFYIDLEVLALAVESLLELGV--NNFTIDVGEVNFFKGIA 161

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +   +                        + +  L+ +       +F     ++ + IDI
Sbjct: 162 KDCEIDE-------------------ASSEVLCKLVDKKDYIGIENFLIRKGISQKVIDI 202

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
             +   +   +   +  +        ++    L  I   + K GY  N I I   +V+ L
Sbjct: 203 FRNLTRLYGREDKIKEAKKFANNEMSKQAIERLSEIYNNMVKLGY-QNYITIDFGMVKHL 261

Query: 300 EYYTGCVYEAILGFPVMN--EKQKPVVFGSVGGGGRYD-------------GLVSRFKGQ 344
            YYTG ++   +           +      + G   Y               L +  + +
Sbjct: 262 NYYTGIIFSGYIQELGYPVLNGGRYDNLCEIFGTKLYAIGFAIGLDRILEWKLKNAQRRE 321

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
               +          +ALK L  + N  +++    +     ++  +SK    
Sbjct: 322 RQYDSLVLYKEGHFEMALKLLLKTDNEKQKIYFYTVPAKIEEAFLISKAMKV 373


>gi|159184694|ref|NP_354297.2| prolyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81848693|sp|Q8UFV9|SYP_AGRT5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|159139984|gb|AAK87082.2| prolyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 440

 Score = 83.0 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 60/461 (13%), Positives = 128/461 (27%), Gaps = 79/461 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR      G   +  P L+ ++ L +     D   K +  +
Sbjct: 38  GIYSWLPLGKRVLDKVNKIIREEQNRAGAIELLMPTLQTAE-LWQESGRYDDYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
           +D   + +       ++   + R   +++  +       ++                 F 
Sbjct: 97  KDRQDRQMLYGPTNEEMITDIFRSYVKSYKNLPLNLYHIQLKFRDEVRPRFGTMRSREFL 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D     A  +  +M +    T E +G               L  I        
Sbjct: 157 MKDAYSFDLTKEDAIHSYNKMFVAYLRTFERLG---------------LRAI-------- 193

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                                   ++   G    ++S +F   A+    ++    SFL  
Sbjct: 194 -----------------------PMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDR 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            +     +  ++       ++   +    SE+   + Y++   +      RG+E      
Sbjct: 231 AIPAESTDFDDVAALQGVFDEWTADYAATSEMHDDAAYDAIP-EGERLSARGIEVGHIFY 289

Query: 307 YEAILGFP------VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           +      P        + K+ PV  GS G G             +               
Sbjct: 290 FGTKYSEPMGAKVQGKDGKEHPVHMGSYGIGPTRLVPAIIEASHDENGI----------- 338

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                     ++     V+I     D+   +  +     L  AG          +  G +
Sbjct: 339 ------IWPASVAPFDVVIINMKAGDAACDAACEKLYYQLSNAGKDVLYDDTDDRA-GQK 391

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              AD    P+ II G    + G +++KD   G+  +  I+
Sbjct: 392 FATADLIGVPVQIIVGPRSVANGEVEVKDRKTGERETVTIE 432


>gi|312221151|emb|CBY01092.1| similar to protein kinase (Gcn2) [Leptosphaeria maculans]
          Length = 1609

 Score = 83.0 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 79/502 (15%), Positives = 160/502 (31%), Gaps = 63/502 (12%)

Query: 15   FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP-NKGVFSL 73
              D       ++N + D +  ++ ++G   ++ PLL         LP  D   NK V  L
Sbjct: 1003 TNDIL-----LQNLVKDRLAMVFRSHGAVEVQRPLL---------LPWSDHYANKNVVKL 1048

Query: 74   QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             D  G  + L +DLT P AR +      +       +       +    G      + D 
Sbjct: 1049 FDPSGTLVQLPHDLTLPYARSIGRGAPFLEKTFTIGQ----VYRDSPAGGAPCSNGEADF 1104

Query: 134  DNVGSSAET---ADAEMCMMMADTLEAVGIKRND-YHIGINNRKILDGILEKIGLHGDDK 189
            D +          +AE+  ++ + ++      N      +N+  +LD I+E   +    +
Sbjct: 1105 DILSHDTLDLALKEAEVLKVVDEIVDNFPSINNTPMCFHLNHADLLDMIMEFCRISVPKR 1164

Query: 190  LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-L 248
               + I+ R    +     Q V+  L           +    ++S  ID +  F   D  
Sbjct: 1165 WAVKNILSRL--NISSHNWQKVRNELR----------SPEIGVSSTSIDDLARFDWRDTP 1212

Query: 249  EKSMHELYELVKGTIAGEKGF---NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            EK+   L  L++GT   ++       L  +   +              +      Y  G 
Sbjct: 1213 EKAFSRLRRLLEGTKYLDRTHAIFAHLRSVVRYMELWNIKRKVYISVLSSFNESFYAKGI 1272

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK-- 363
            +++ +              +  + G  R  G V         A G ++G  +L+ ++   
Sbjct: 1273 MFQCLFDTKQREVLAAGGRYDKLIGEYRPRGSVHAHPIAGYHAVGVNLGWDKLVNSMARW 1332

Query: 364  -------------SLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEM 409
                         + E +                 D +   S        L   G  AE+
Sbjct: 1333 LKKPEKSSFLKKHAEEDAPLVSWMPRRCDCLVASFDPNILRSTGVKMVAELIAHGYTAEL 1392

Query: 410  FLGSSKNFGNQLK-YADRRNCPLAII---QGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             + +  +  + L+ Y D R+  + II          +  L++K +AK ++      +  +
Sbjct: 1393 AVDAH-SIEDLLRHYRDDRHSWIIIIKHGVAPD---KPELKVKSIAKKEDTDLRTNDLLN 1448

Query: 466  WREARVAQITIPISELVSTVKK 487
            +    +             + K
Sbjct: 1449 YLRNELRDREGREGSAAQRLIK 1470


>gi|299754835|ref|XP_001828226.2| other/PEK/GCN2 protein kinase [Coprinopsis cinerea okayama7#130]
 gi|298410945|gb|EAU93577.2| other/PEK/GCN2 protein kinase [Coprinopsis cinerea okayama7#130]
          Length = 1590

 Score = 83.0 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 63/508 (12%), Positives = 132/508 (25%), Gaps = 63/508 (12%)

Query: 1    MGKKTKLRAELP------------RGF---ADCP-TKEIRIRNRILDSIRNIYENYGFDP 44
            M K      +              RGF    D    + + + + + D +  +++ +G   
Sbjct: 966  MAKPDTPHYQTVLSLLFNQPTKASRGFLYDKDLDRPEYLSLADAVQDRLAALFKLHGAVD 1025

Query: 45   IETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
            IE P       L   +  ED  N    +  D  G  +SL  +L  P AR  A+     + 
Sbjct: 1026 IEPP------LLMPVVDREDEKNHA--TFIDRMGTLVSLPNNLLVPFARLAAKGNSKRIK 1077

Query: 105  PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
                              G          D +    E         +      +     +
Sbjct: 1078 ----RYHIANIYRPNPVAGHPLIQKAAVFDIITQDVEYGPIAAGAEVIAVSNDILNTFPN 1133

Query: 165  YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
                 N R     I+E       ++    ++ +    K      + +  LL +G T    
Sbjct: 1134 LTGTYNIRVSHSTIVELAMARIPEEHRAAVVEILMQSKSSTSQKRAL--LLKKGLTRAVI 1191

Query: 225  DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
            D  +  N + + ID +V  L       +                  E+    +    +G 
Sbjct: 1192 DELEILNESEDDIDDVVYKLEKISSPLL----------PLLRPVVAEIKATLQHAAFAGV 1241

Query: 285  NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
            +   I     +    +Y+   +   +      +                   L  +    
Sbjct: 1242 DRPMIIHPLMLGNHHQYFKDGILIELTHKSKPSNVLAAGGRYDAVIARHSPTLRQKGDNL 1301

Query: 345  NVPATGFSIGISRLIVALKS--------LESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
                   ++      +AL           E  +          +  + + +  L      
Sbjct: 1302 CAIGIQIALEKILAQLALFQSNYVKNLIKEERSFGYWSPRRCDVYVVSYHTGYLQDRLEV 1361

Query: 397  TQMLRTAGIRAEMFLGSSKN------FGNQLKYADRRNCPLAIIQGTGERSRGM----LQ 446
               L    I A++   S+ +        +     +R      +      R+        +
Sbjct: 1362 VSYLWQHNISADIMYESAISDIEHERLESV---CEREGILFTVC--PRPRASKQTQSAFK 1416

Query: 447  IKDLAKGKELSREIKNNESWREARVAQI 474
            +K + KG E          W + ++A+ 
Sbjct: 1417 VKSILKGAEYDLSRAELVGWLQHQIAEQ 1444


>gi|332970668|gb|EGK09650.1| ATP phosphoribosyltransferase regulatory subunit [Psychrobacter sp.
           1501(2011)]
          Length = 441

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 5/156 (3%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G +D  ++E + +  +   +  +  + G++ I  P++E+++SL       +   +  
Sbjct: 41  LPDGVSDLLSEEAQKQEWLRYKLTRLLVSRGYELICPPMIEFTESLL--GNASEDLKRQT 98

Query: 71  FSLQDD-DGQWISLRYDLTAPLAR--YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           F + D   G+ + +R D+T  + R               R    G V R    G    R 
Sbjct: 99  FKIIDQLSGRLMGVRADITPQILRIDAHLNKMGKANQIARYCYAGHVIRTLPDGLFGSRT 158

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
            +Q   +  GS +  AD E+  ++   ++ + +K++
Sbjct: 159 PLQLGAEIFGSDSLDADIELIDVLYCLIDNLNLKKH 194


>gi|251797797|ref|YP_003012528.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545423|gb|ACT02442.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 571

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 59/522 (11%), Positives = 132/522 (25%), Gaps = 80/522 (15%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G          +  ++   IR   +N G   +  P ++ +D L +     ++    
Sbjct: 34  QLAAGIYTYLPAGRLVLRKLEKIIREEMDNAGCQEVFMPAMQPAD-LWRQSGRYEKYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  L+D   +  +L     ++   L R    ++  +          +R     R      
Sbjct: 93  LVRLKDRHDREFALGPTHEEVITDLVRGEVNSYRQLPVTLYQIQTKFRDEKRPRYGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE-- 180
             F        D        +   M           G+                G  E  
Sbjct: 153 REFMMKDAYSFDADWEGLNESYQRMYDAYHRIFSRCGLHFRPVEADAGTIGGEGGTHEFM 212

Query: 181 ----------KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD---NSGDFT 227
                         H     N      R  +     G       L +  T       +  
Sbjct: 213 ALADIGEDTIAACDHCRYAANLEKAGYRIPEGEINTGDSEAYPELEKIHTPNVRKIDELV 272

Query: 228 KGANLTSEQIDIMVSFLSID-------------LEKSMHELYELVKGTIAGEKGFNEL-- 272
           +  ++++++I   + FL+                E  +  L +  K  +A ++    L  
Sbjct: 273 QALDVSADRILKTLLFLADGKPVAVIVRGDHEVNEIKLAGLLQADKLELADQETTERLTG 332

Query: 273 -----------------VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
                               +  +  +   +N        VR   ++       +    +
Sbjct: 333 AAVGFAGPIGLSIPVIVDYSAAGLDSAIAGANETDYHWKHVRPGAHFVAARLRDVRNAVL 392

Query: 316 MNE------------KQKPVVFGSVGG-------GGRYDGLVSRFKGQNVPATGFSIGIS 356
            +             +   V      G          Y       K   +   G  I   
Sbjct: 393 GDGCPNCAEGKLRMFRGIEVGQVFKLGTKYSEVMQANYLDATGSEKPIIMGCYGIGISRV 452

Query: 357 RLIVALKSLE----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
              V  +  +         +      ++     D   +       + L +AG    +   
Sbjct: 453 MSAVVEQHHDEQGIRWPLELAPYQVHVVPVSAKDGQQMDVAGKLYRELMSAGFEVLLDDR 512

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             +  G + K +D    P+ I+ G    + G++++K   +G+
Sbjct: 513 DER-PGVKFKDSDLIGIPVRIVVGRQ-AADGVVELKYRNEGE 552


>gi|312127470|ref|YP_003992344.1| histidine--tRNA ligase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777489|gb|ADQ06975.1| Histidine--tRNA ligase [Caldicellulosiruptor hydrothermalis 108]
          Length = 393

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 62/342 (18%), Positives = 114/342 (33%), Gaps = 50/342 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK          F D           I      +++ +G+  +E    E  +      
Sbjct: 1   MSKK----------FVDYYPPVSDTLEEIRKKTIFLFKKFGYKLVEPSTFEDYEKSKNLN 50

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                         D DG  I+LR + T  +A  +A  F T V+P +    G  ++  + 
Sbjct: 51  GSNTI------KFMDSDGTVIALRNEFTPKVA-EIATKFQTNVYPLKLCYFGKAYQFLQQ 103

Query: 121 GPGRFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
             G  R+F Q  ++N  +S       E+ ++  ++L  +G+   ++ I +       GI 
Sbjct: 104 EAGDLREFFQAGIENFHTSDSFYIDLEVLVLAVESLLELGVI--NFTIDVGEVNFFKGIA 161

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +   +                        + +  L+ +       +F     ++ + ID+
Sbjct: 162 KDCEIDE-------------------TSAEVLCKLVDKKDYIGIENFLIRKGISQKVIDV 202

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
             S   +   +   +  +        +     L  I   + K GY  N I I   +V+ L
Sbjct: 203 FRSLTRLYGREDKIKEAKKFANNEMSKLAIERLSEIYNNMVKLGY-QNYITIDFGMVKHL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
            YYTG ++   +                V  GGRYD L   F
Sbjct: 262 NYYTGIIFSGYIQELGY----------PVLNGGRYDNLCEIF 293


>gi|240103065|ref|YP_002959374.1| threonyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|259516771|sp|C5A5J8|SYT_THEGJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239910619|gb|ACS33510.1| Threonyl-tRNA synthetase (thrS) [Thermococcus gammatolerans EJ3]
          Length = 626

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 59/212 (27%), Gaps = 1/212 (0%)

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            A +    EL  I            R                    A+    +  E  + 
Sbjct: 397 EANKDFIVELAKIIGKPVLIEMWDQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAER 456

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                    G+    +      +         I      L++          + P+ +  
Sbjct: 457 FGITYYDEEGKERYPLILHCSPSGAIERVMYAILEKQAKLQAQGKKPMFPLWLSPIQVRV 516

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +    D L         L  A IR ++   + +    +++ A++   P  I+ G  E+ +
Sbjct: 517 IPVSDDVLDYALYVAGKLEGAKIRVDVDDTNDR-LNKKIRKAEKEWVPYIIVVGKNEKEQ 575

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             + ++    GK++  ++++       +    
Sbjct: 576 NTVTVRRREDGKQVEMQLEDLIREIRQKTEGF 607


>gi|58038568|ref|YP_190532.1| prolyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81819190|sp|Q5FUU9|SYP_GLUOX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58000982|gb|AAW59876.1| Prolyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 438

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/462 (12%), Positives = 115/462 (24%), Gaps = 74/462 (16%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +R+   I   IR   +  G   +  P L+ ++ L +     D     
Sbjct: 34  QTASGIYAWLPAGLRVLRNIEQIIREEQDAIGAQEVLMPTLQSAE-LWRRSGRYDAYGPE 92

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  +QD  G+ +                                             + I
Sbjct: 93  MLRIQDRHGRDL--------------------------------------LYGPTNEEMI 114

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                +   S +     +  +     + V  +           K                
Sbjct: 115 TDIFGSSVKSYKELPKALYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDASYEGAVASY 174

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN---------LTSEQIDIM 240
               L  LR   +L    +  V    G    D S +F   A             E+ D +
Sbjct: 175 RRMMLSYLRIFQRLGVRAVPMVAD-TGPIGGDLSHEFLVLAPTGESAVFFDAALEEQDWL 233

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              +  D  +S+   +  V    A     ++    +++  +       I++      G +
Sbjct: 234 SRPVDCDDAESLATFFATVTDHYAATDEKHDEAEWAKVPAERKREGRGIEVGHIFYFGTK 293

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           Y      E             P +     G  R  G +      +      +        
Sbjct: 294 YTASMGIEV---SGPDGAPFHPHMGSYGVGVSRLVGAIIEASHDDAGIIWPASVAPYRAA 350

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L   +    + +    +       D ++L                  ++   S+  G +
Sbjct: 351 ILNLRQ----DDEACDAICDRIYGTDPENL------------------LYDDRSERAGVK 388

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              AD    P  II G      G +++K  A G+     +++
Sbjct: 389 FNDADLMGHPWQIIVGPRGAKEGKVELKQRATGERFELSVED 430


>gi|159903402|ref|YP_001550746.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus str. MIT 9211]
 gi|229464979|sp|A9BAD0|HISZ_PROM4 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|159888578|gb|ABX08792.1| possible Histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT
           9211]
          Length = 392

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 70/416 (16%), Positives = 141/416 (33%), Gaps = 51/416 (12%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K++ L      G  +   +++   N +   +  IY+ +G+  +  P +E   +L    
Sbjct: 1   MAKQSTL------GSKELNPRQVEENNLLATKLSEIYKKWGYQEVAPPQVEGLKTLMAGG 54

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF--RNE 118
                 +K +  L     + + LR ++TA +AR  +  +     P R +  G +F  R E
Sbjct: 55  G---IDSKEILKLVI--DEPVGLRPEMTASIARAASTRYVAEPRPLRLWASGTIFKSREE 109

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
             G     + +Q  V+  G      + E+  ++ ++L+ + I  +   I + N   L  +
Sbjct: 110 SDGKIVIDESLQSGVELFGIEGMEIEVELLYLLIESLKKLNIDESSMPILLINHISLMEL 169

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           +             +    +  D L  F L  ++ L  +    N+    +    +   + 
Sbjct: 170 IIS--------KFSKSSKEKVTDILSNFDLIEIEKLELDFDERNTLKLLQELRGSPRNV- 220

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR-KSGYNSNRIKISSTIVR 297
                             + ++      K  + L  I  ++   S   + ++++  T   
Sbjct: 221 -----------------IKTLESLYGNNKILDSLTKIFNIIEPISNKYNIQLQLDPTFKP 263

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
             E YTG V+E +                 +  GGRYD LV        P    + G S 
Sbjct: 264 HYELYTGIVFELVCNTRETP--------VVIARGGRYDELVK--MFNENPEDEIAAGFSY 313

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
            I  ++ L +            I      + ++         L   G  A + L S
Sbjct: 314 SIDKIRELNTRLETFDTNPE-RILVAYGPNKTIKDAIECQAKLHEKGYVAIIELNS 368


>gi|16126174|ref|NP_420738.1| prolyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221234945|ref|YP_002517381.1| prolyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|81856261|sp|Q9A6Z5|SYP_CAUCR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782893|sp|B8GWT1|SYP_CAUCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|13423386|gb|AAK23906.1| prolyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220964117|gb|ACL95473.1| prolyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 443

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/461 (12%), Positives = 122/461 (26%), Gaps = 62/461 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+ N+I   +R   +  G   +  P ++ +D L +     D  
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLNKIEQIVREEMDRAGAIELLMPTIQLAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  + D   + +       ++   + R   +++  +      Y I   FR+E+    
Sbjct: 90  GDEMLRITDRHKRELLFGPTAEEVVTDIFRASIKSYKDLPK--NLYNIQWKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S    AD          +  + +           R  L  +     
Sbjct: 148 GVMRGREFLMKDAYSFDLDADGARKSYNRMFVAYLNLFA---------RMGLKAV----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      ++   G    D S +F   A      +      
Sbjct: 194 --------------------------PMRADTGPIGGDLSHEFIVLAETGESAVFCHKDL 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           + +       +   +             L   +E +      +   +      RG+E   
Sbjct: 228 VEMPAPGPDLDW--INGDLQPLVNQRTALYAATEEMHDEAAFNALPEGDRLSARGIEVGH 285

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +      P+    Q P         G Y   VSR  G  + A+              
Sbjct: 286 IFSFGTKYSEPMKATVQGPDGQQVPVQMGSYGVGVSRLLGAIIEASH------------D 333

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT-QMLRTAGIRAEMFLGSSKNFGNQLK 422
                         V I  M     +           L+ AG         ++  G +  
Sbjct: 334 EGGIIWPESVAPFDVGIVNMRQGDAACDAACETAYNALKAAGREVLYDDTDARG-GAKFA 392

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             D    P  +I G    + G+++IK    G+  +  +++ 
Sbjct: 393 TMDLIGLPWQLIVGPKGIAEGVVEIKHRKTGERHTASLESV 433


>gi|13235471|emb|CAC33625.1| Histidyl-tRNA synthetase [Rickettsia montanensis]
          Length = 253

 Score = 82.6 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 84/267 (31%), Gaps = 25/267 (9%)

Query: 204 DKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT- 262
                   +  L E   D     ++ + +   +  + +     + ++ +     ++    
Sbjct: 9   CNESRSVYQQKLVEYLNDFKDQLSEESKIRLSKNPMRILDSKSETDQKIIANAPVLSEYY 68

Query: 263 -IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
               ++ F EL+   +++        +  I+  +VRGL+YY    +E            K
Sbjct: 69  TDESKEYFEELIKYLDIL------GVKYSINPRLVRGLDYYCHTAFEFTTK--------K 114

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                ++  GGRYDGL       +             I  ++    S           + 
Sbjct: 115 LGSQSTILAGGRYDGLAKIMGNNDDVPAIGFAAGIERIALMREYNISEVKP-------VL 167

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +    +++         LRT  I   +          +++     N    I  G  E++
Sbjct: 168 VLPIGKNNICYALEIVDKLRTENIATIIEPLG--KIAKRMQRIFNENAKFIIFIGDEEQA 225

Query: 442 RGMLQIKDLAKGKELSREIKNNESWRE 468
              L+IKDL K +E   +        +
Sbjct: 226 NNNLKIKDLKKEEEYIVDFAKALELLK 252


>gi|326803832|ref|YP_004321650.1| threonine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651446|gb|AEA01629.1| threonine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 651

 Score = 82.6 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/472 (10%), Positives = 124/472 (26%), Gaps = 81/472 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G          IR ++   I +     G+  + TP++   D   K     D  
Sbjct: 259 IDPKTGQGLPFWLPNGATIRRQVERYIVDKEVQAGYQHVYTPIMADVDLY-KTSGHWDHY 317

Query: 67  NKGVFSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           +  +F   D +DG+   LR                      R Y+       E       
Sbjct: 318 SDDMFPTMDFEDGESFVLRP--------------MNCPHHIRVYQNKVHSYRELPIRIAE 363

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
              +     +   S      EM +  +     +   ++++   +   +           +
Sbjct: 364 LGMMHRYEKSGALSGLQRVREMTLNDSHIFVRLDQIKDEFKSILRFMQD---------AY 414

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            D  + +    L   D  D            +   D+       + L     ++ + +  
Sbjct: 415 HDFNITDYRYRLSYRDPKDT----------KKYFDDDEMWEKAQSMLKEAMDELGLDYFE 464

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + E + +     V+   A         +  + +    ++   +                
Sbjct: 465 AEGEAAFYGPKLDVQVKTALGNEETLSTIQLDFLLPEKFDVTYVGEDGQNTHRPVMIHRG 524

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           +   +  F     ++    F +                                +A +  
Sbjct: 525 IVSTMERFVAYLIEEYKGAFPTW-------------------------------LAPQQA 553

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                N  +    +    +               +R+ G+R E+    ++  G +++ A 
Sbjct: 554 ILIPVNENQHADYVYQVAN--------------RMRSEGLRIEVD-DRNEKMGYKIREAQ 598

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            R  P  ++ G  E   G + ++     K  + ++    +   A +    + 
Sbjct: 599 TRKVPYQLVFGDNEIENGTVTVRRYGSKKTETVDLDEFINMIHAEIDSYGVK 650


>gi|28379096|ref|NP_785988.1| histidine--tRNA ligase (putative) [Lactobacillus plantarum WCFS1]
 gi|254557228|ref|YP_003063645.1| histidine-tRNA ligase (putative) [Lactobacillus plantarum JDM1]
 gi|308181292|ref|YP_003925420.1| histidine--tRNA ligase (putative) [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|46395802|sp|Q88UD8|HISZ_LACPL RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|28271934|emb|CAD64839.1| histidine--tRNA ligase (putative) [Lactobacillus plantarum WCFS1]
 gi|254046155|gb|ACT62948.1| histidine-tRNA ligase (putative) [Lactobacillus plantarum JDM1]
 gi|308046783|gb|ADN99326.1| histidine--tRNA ligase (putative) [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 383

 Score = 82.2 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+  LP G  D   +  R +  ++  I+  ++  G  PI TPLLE       +       
Sbjct: 2   LKHLLPLGTRDEFGRRARTKQHLIAVIQAHFKQRGLAPIATPLLENEAVFDPY----QMG 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           N  ++ L  +DG+ + LR D+T P+AR+++     +               +  G     
Sbjct: 58  NYQLYRLFGNDGRTLVLRPDMTLPVARFISATNVPLPQKFGYVGDIFRVSRQLSGSYNQI 117

Query: 127 QF 128
             
Sbjct: 118 TQ 119


>gi|288961937|ref|YP_003452247.1| ATP phosphoribosyltransferase regulatory subunit [Azospirillum sp.
           B510]
 gi|288914217|dbj|BAI75703.1| ATP phosphoribosyltransferase regulatory subunit [Azospirillum sp.
           B510]
          Length = 384

 Score = 82.2 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 3/163 (1%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    E       ++ +   +   G+  ++ PL+E+ ++L          +K  
Sbjct: 11  LPAGLHDVLPSEAAHEAAAVERLLAEFAAQGYRRVDPPLVEFEENLLSGAG--AAMSKQT 68

Query: 71  FSLQD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D    + +++R D+T  +AR           P R    G V R +       RQF 
Sbjct: 69  FRLMDPHSQRMMAVRADITPQIARIATTRLKNEARPLRLCYAGQVLRVKGSQLRPERQFT 128

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           Q  V+ +G+    ADAE+ ++    L A+G+      + +   
Sbjct: 129 QVGVELIGALEAEADAEVVLLAVQGLTAIGVPHLSVDLCVPTM 171


>gi|238883294|gb|EEQ46932.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 1763

 Score = 82.2 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 64/428 (14%), Positives = 141/428 (32%), Gaps = 30/428 (7%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            +  + ++I+  +  I+ N+G        +E  ++         +  + V+   D  G  +
Sbjct: 1115 DYLLFDKIMKELTKIFTNHG-------AIENLNTNLVLPKAPSQSRELVYDFLDRSGAVL 1167

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
            +L YDLT P AR++++   TI    R        V             F       V  +
Sbjct: 1168 TLPYDLTLPTARFLSKTDMTIPKTFRHEFVYRPNVRGIGIPDRYSAVNFDIAGGSEVNKA 1227

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK----IGLHGDDKLNERLI 195
               A    C+ + D +        +  I IN+  ILD ++      IG+    KL+   +
Sbjct: 1228 TLFAHDAECLKVIDEIVNTLPCFKNTIIVINHYDILDAVVSFSFGNIGIDDKKKLDIFGV 1287

Query: 196  VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
            + +         ++       +     + D  +  N T E             +K M + 
Sbjct: 1288 LSQLGIDKSSDEIKRYLREDFQVPHTVTKDLVENFNFTCEVERARQKL-----QKLMVDS 1342

Query: 256  YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL-GFP 314
             +L+K     E+ +  L+ + +++++    ++ I    +      Y  G +++A+     
Sbjct: 1343 PQLLK----VERAYTYLIEVVKILKQMNIKTSMIFNPLSNYNSKYYIHGIMFQAVFKPDR 1398

Query: 315  VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL------ESS 368
                 +             +  + +  K       GFS+  S L + +K+L      +  
Sbjct: 1399 SKRYTRVVTGGRYDSLIESFSNVTTTTKQITPHGVGFSLTTSLLFILMKTLISRGKSKLD 1458

Query: 369  TNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              N  +     +         LS+             I A++   ++K      +  +  
Sbjct: 1459 LVNKWKGNRCKVLISSTQQQFLSQVGYQLVSKFWNKNISADITSVAAKTQDEIFQNGNSE 1518

Query: 428  NCPLAIIQ 435
                 +I 
Sbjct: 1519 GAIWIVII 1526


>gi|296314132|ref|ZP_06864073.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria
           polysaccharea ATCC 43768]
 gi|296839234|gb|EFH23172.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria
           polysaccharea ATCC 43768]
          Length = 383

 Score = 82.2 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 74/409 (18%), Positives = 136/409 (33%), Gaps = 51/409 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV      G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHARPDGLSNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L    
Sbjct: 123 LQAGAEMYGFAGIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK  +     VK    +G    +                         
Sbjct: 181 SATLLALM---QDKDTRAVEAQVKAWKLDGMWAKAFSLLPRL---------------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +      +    A     +EL  + +      +  + I I  + +R   Y+TG VY 
Sbjct: 223 REVLSAARGRLPDLSAVGNALDELQAVCD-----AFPDDEIHIDLSELRVDNYHTGLVYA 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E  
Sbjct: 278 AYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAIERQ 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         +  D++     +   + LR  G    +  G   N 
Sbjct: 327 P------------AVSVDAEDAEAAREAIETLRAQGQCVVIDYGIGHNV 363


>gi|227821637|ref|YP_002825607.1| prolyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227340636|gb|ACP24854.1| prolyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 501

 Score = 82.2 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/448 (12%), Positives = 122/448 (27%), Gaps = 53/448 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR      G   +  P L+ ++ L +     D   K +  +
Sbjct: 97  GIYSWLPLGKRVLDKVNAIIREEQNRSGAVELLMPTLQSAE-LWQESGRYDAYGKEMLRI 155

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D        R  L                                       + I    
Sbjct: 156 KDRQD-----RPML---------------------------------YGPTNEEMITDIF 177

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            +   S       +  +     + +  +           K                    
Sbjct: 178 RSSVKSYRNLPLNLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLDREGAEHAYNKMF 237

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              LR  D++    +  ++   G    + S +F   A+    ++     FL  D+     
Sbjct: 238 AAYLRTFDRMGLRAI-PMRADTGPIGGNLSHEFIILADTGESEVYCHKDFLGFDIPGKDT 296

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
              ++       +K  +     SE+  ++ +++   +      RG+E      +      
Sbjct: 297 NFDDVAGLKAIFDKWTSRYAATSEMHDEAAFDAIS-EGEKVSARGIEVGHIFYFGTKYSE 355

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  +   P     +   G Y         + VPA   +      I+          ++ 
Sbjct: 356 AMGAKVLGPDGKEHIVHMGSY----GIGPTRLVPAIIEASHDENGII-------WPKSVA 404

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I     D+   +        L  AG    +     +  G +   AD    P+ I
Sbjct: 405 PFDAVVINMKTGDAACDAACGTLYSDLGKAGFDVLLDDTDDRA-GAKFATADLIGVPVQI 463

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           I G    + G +++KD   G+  +  ++
Sbjct: 464 IVGPRSIANGEVEVKDRKTGERETMTVE 491


>gi|240080295|ref|ZP_04724838.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae FA19]
 gi|240123088|ref|ZP_04736044.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae PID332]
 gi|268596445|ref|ZP_06130612.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae FA19]
 gi|268681716|ref|ZP_06148578.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268550233|gb|EEZ45252.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae FA19]
 gi|268622000|gb|EEZ54400.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 383

 Score = 82.2 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 76/410 (18%), Positives = 137/410 (33%), Gaps = 53/410 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLPNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+       L    +K  D    + +   + GI   +      
Sbjct: 123 LQAGAEMYGFADIRGDIELI-----DLMLKSMKIADMGKVLLSLGHI-GIFRALSDAAHL 176

Query: 189 KLNERLIVLRAIDKLDKFGLQ-GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
              +   +L  +   D   ++  VK    +G    +                        
Sbjct: 177 DAGQSATLLALMQDKDTGSVEAQVKAWKLDGMWAKAFSLLPRL---------------YG 221

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + +    +    A     +EL  + +      +  N I I  + +R   Y+TG +Y
Sbjct: 222 GREVLSDARGRLPDLSAVGGALDELQAVCD-----AFPDNEIHIDLSELRVDNYHTGLLY 276

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E 
Sbjct: 277 AAYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAVER 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                          +  D++     +   + LR  G    +  G   N 
Sbjct: 326 QP------------AVLVDAEDAEAAREAVEALREQGQCVVIDYGIGHNV 363


>gi|194098134|ref|YP_002001182.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae NCCP11945]
 gi|239998589|ref|ZP_04718513.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae 35/02]
 gi|240125340|ref|ZP_04738226.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae SK-92-679]
 gi|268594449|ref|ZP_06128616.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268683943|ref|ZP_06150805.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|229464975|sp|B4RK97|HISZ_NEIG2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|193933424|gb|ACF29248.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae NCCP11945]
 gi|268547838|gb|EEZ43256.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268624227|gb|EEZ56627.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|317163863|gb|ADV07404.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 383

 Score = 82.2 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 76/410 (18%), Positives = 137/410 (33%), Gaps = 53/410 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLPNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+       L    +K  D    + +   + GI   +      
Sbjct: 123 LQAGAEMYGFADIRGDIELI-----DLMLKSMKIADMGKVLLSLGHI-GIFRALSDAAHL 176

Query: 189 KLNERLIVLRAIDKLDKFGLQ-GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
              +   +L  +   D   ++  VK    +G    +                        
Sbjct: 177 DAGQSATLLALMQDKDTGSVEAQVKAWKLDGMWAKAFSLLPRL---------------YG 221

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + +    +    A     +EL  + +      +  N I I  + +R   Y+TG +Y
Sbjct: 222 GREVLSDARGRLPDLSAVGGALDELQAVCD-----AFPDNEIHIDLSELRVDNYHTGLLY 276

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E 
Sbjct: 277 AAYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAVER 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                          +  D++     +   + LR  G    +  G   N 
Sbjct: 326 QP------------AVLVDAEDAEAAREAVEALREQGQCVVIDYGIGHNV 363


>gi|171693873|ref|XP_001911861.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946885|emb|CAP73689.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1620

 Score = 82.2 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 72/483 (14%), Positives = 164/483 (33%), Gaps = 63/483 (13%)

Query: 19   PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
               ++  R  + D++ +I+  +G   +ETP            P  +  ++ +  L D +G
Sbjct: 1027 SGADLMRRYIVKDTLVSIFRRHGA--VETPT-------ACLYPRSNYYDQNIVRLLDQNG 1077

Query: 79   QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
              + + +DL    AR +A    T     +          ++   G+   + + D D V +
Sbjct: 1078 TVLQMPFDLVMGNARSLA--RVTQGPVIQRSYAFGNIFRDRRDGGQPDVYGEVDFDIVTT 1135

Query: 139  SAET---ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
             A      +AE   ++ + + A     +           L  ++ +      +       
Sbjct: 1136 DALDLALKEAEAIKVLDEIVSAFPTTSSTPICFQLGHSDLLHLIFEFCGVDINARPAAAD 1195

Query: 196  VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHE 254
            VL  +  +  F    V+  L           +    +++  +D +  F   D   K++ +
Sbjct: 1196 VLSKL-NIRNFTWLKVRSELR----------SPEIGISATSVDELQRFDFRDTPSKAISK 1244

Query: 255  LYELVKGTIAGEK---GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +  L +G+   +K       L  + E  +K G ++       + +  + +  G ++  + 
Sbjct: 1245 IRGLFEGSEFSQKVSPILAHLKDVYEYTKKFGVSNKVYIAPLSSINEVFFRGGILFSCLY 1304

Query: 312  GFPVMNEKQKPVVFGSVGGGGRYDGLVSRF------KGQNVPATGFSIGISRLIV----- 360
               V +             GGRYD L+         + +   A GFS+   + +      
Sbjct: 1305 DKKVKD---------VFAAGGRYDNLIKEHRPKIAGRFEERHAVGFSLNWEKQLAKQVPK 1355

Query: 361  ------ALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGS 413
                    K+ E  +  I  M    +     D     S      QML    I AE+    
Sbjct: 1356 ATGKAFLKKAAEEESQGIFSMKRCDVLIASFDPSVLRSSGIELLQMLWAHNISAELA-RD 1414

Query: 414  SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK--NNESWREARV 471
            +++  + L      +    +I     +   M+++K + +      +I   +  +W ++ +
Sbjct: 1415 TRSPEDLLSSYREESYSWIVII----KQDNMVKVKSMGRKDASDADISATDLLNWLKSEI 1470

Query: 472  AQI 474
             + 
Sbjct: 1471 RER 1473


>gi|119498409|ref|XP_001265962.1| protein kinase (Gcn2), putative [Neosartorya fischeri NRRL 181]
 gi|119414126|gb|EAW24065.1| protein kinase (Gcn2), putative [Neosartorya fischeri NRRL 181]
          Length = 1592

 Score = 82.2 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 71/470 (15%), Positives = 139/470 (29%), Gaps = 49/470 (10%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ +++ + + +  I+  +G        +E +  +    P       G   L D  G  +
Sbjct: 995  ELLVQSLVKERLTAIFRRHG-------AVETTRQML--FPRSQHYRSGAVRLLDASGNQL 1045

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
             L +DLT P AR ++    ++               E       R   + D D V  +  
Sbjct: 1046 QLPFDLTLPNARSISRQDPSLEKTFAFG----TVYREMPHGSEPRTHKEVDFDIVSHNTL 1101

Query: 142  TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
                ++ +  A+ ++ +     ++         L        ++  D L   +   R   
Sbjct: 1102 ----DLALKEAEVIKVLDEIIEEF-------PPLRSSPMSFLINHSDLLQLIMEFCRITP 1150

Query: 202  KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                   + +  L     T         +         +      D   +  +    ++ 
Sbjct: 1151 SQVPLVKEVISKLNFGKWTMQKIRSELRSPAIGVASTSLDDLARFDFRDTPKQAQNRLRS 1210

Query: 262  TIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRGLEYYTGCVYEAILGFPVMNEKQ 320
             + G +    L  I   +           +     V  L       +   + F  + + +
Sbjct: 1211 IMEGTEFAERLSPIFARINILVTYLQGFDVKRKVYVNPLGSLNDKFFRGSILFQCVFDTK 1270

Query: 321  KPVVFGSVGGGGRYDGLVSRF------KGQNVPATGFSIGISRLIVALKS---------- 364
            +  VF     GGRYD LV  F            A GF++   RL  A+            
Sbjct: 1271 RRDVF---AAGGRYDRLVQEFSPKGRASCSQTHAVGFNLSWDRLGSAMLEYLKSTTKAPA 1327

Query: 365  --LESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
               ES      +     +     D+  L        Q L  + I AE+ + +S +    L
Sbjct: 1328 KHAESDAGAFWKTRRCDVLVASFDATVLRTMGVKLVQDLWASDISAELAVDAS-SLEELL 1386

Query: 422  KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
                  N    +I     + RG  +++ LA  +EL         W    +
Sbjct: 1387 SEYKEHNHSWIVIAKQDSKERG-FKVRCLAPKEELDIRSSELIPWLRNEI 1435


>gi|163782048|ref|ZP_02177047.1| histidyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882580|gb|EDP76085.1| histidyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 390

 Score = 82.2 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 89/431 (20%), Positives = 152/431 (35%), Gaps = 71/431 (16%)

Query: 21  KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQD-DDGQ 79
           +E  +  R + +  +++E +G++ I+ P  ++ D   + L         V   +D + G 
Sbjct: 16  EESNLIKRSIRTATDVFERWGYNYIKLPAFDHYDVHSRALGSRA---SEVIVFKDSEGGS 72

Query: 80  WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
            +SLR D TA + R V   F    +P R Y  G +F +         +  Q  ++ +G  
Sbjct: 73  LVSLRADFTAQVVRSV-SFFKVWHYPLRLYYFGTLFSSGGDT----WETFQTGIELIGVD 127

Query: 140 AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
               DAE+   + D L A+GIK  +  + + +  I++ +L                    
Sbjct: 128 NVEGDAEVVSAIWDYLRALGIK--ELVVSVGHVNIVNKLL-------------------- 165

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
            D++++     V+    E           G       I  +           + +  E  
Sbjct: 166 -DRVEEGLRDEVRRAFKERNLSLLKTAFGG-----GLIPKL----------PLIQSPEEA 209

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
              ++      E   +  L R       R     + VR   YYTG V+E           
Sbjct: 210 LAALSELGLEEERRELELLGRYLREAGVRFTYDLSEVRDFPYYTGVVFEFF--------- 260

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
             P +   V GGGRYD L   +     PATG S+ + RL+   +          E+ P  
Sbjct: 261 -HPGLGSPVAGGGRYDRLSEAYG-GEFPATGGSVYVDRLMNLFE---------PELEPKD 309

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
              +D   D           LR+ G R    + S     + L YA       A++    E
Sbjct: 310 YFVIDLSKDKR-FGFKLASTLRSKGYRVGRDIVSRAT-EHSLDYAFSEGYRKAVVVL-DE 366

Query: 440 RSRGML-QIKD 449
           R   +   +KD
Sbjct: 367 RDVKVYTTVKD 377


>gi|70925795|ref|XP_735536.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56509282|emb|CAH74429.1| hypothetical protein PC000105.00.0 [Plasmodium chabaudi chabaudi]
          Length = 249

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 34/227 (14%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           L   ++E               N L  I EL++      N+     ++ RGL+YYTG ++
Sbjct: 22  LRNDLNESKFDENYKKEMNDVINYLEQIFELLKHFNML-NQFSFDLSLARGLDYYTGIIF 80

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK---- 363
           E +L              GS+G GGRYD L+   + + +P+ G SIGI R+I   +    
Sbjct: 81  EFVLLSDT--------SLGSIGAGGRYDYLIRNKRKEYIPSVGASIGIERIITIAEDVVR 132

Query: 364 --------------------SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
                               +    +    +   V +   + + ++  +     + L  A
Sbjct: 133 KKMTQLLCSENSASGDNASSNANDKSKLNLKDNEVEVLICNTNKNAFKQTIELCKKLWKA 192

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
            I AE    S +    Q  YA  +  PL II G  E  RG++++++L
Sbjct: 193 NIGAEFVYFSDQRLQKQFSYALEKQIPLVIIIG-DEIERGIIKLREL 238


>gi|319788986|ref|YP_004150619.1| prolyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317113488|gb|ADU95978.1| prolyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 568

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 12/156 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  D      R+  +I   IR   E  G   +  P++  ++ L +     D   K +  
Sbjct: 37  SGLYDILPLGARVIRKIEQVIRQEMERAGAQEVILPIMHPAE-LWQESGRWDVYGKEMIK 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK------HGPG 123
            +D   +  +L     ++   L R   +++  +      Y+IG  FR+E           
Sbjct: 96  FKDRHERDYALGPTAEEMITDLVRKEVKSYKELP--LNLYQIGRKFRDEIRPRFGLMRSR 153

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
            F              AE     M    +   + +G
Sbjct: 154 EFIMKDAYSFHASDEDAEREYWNMFETYSRIFKRLG 189



 Score = 59.9 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 2/103 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++I       + +   +     L  AG    +   +++  G + K AD 
Sbjct: 463 IWPVEIAPFEVIVIPVNVKKEEIVEAAERVYSELMEAGFDVLLDDRNAR-PGFKFKDADL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              P  +I G    S G++++K    G+ L   +         
Sbjct: 522 IGIPYQVIVGKK-ASEGVVELKIRRSGERLELPVDGVVGKLRE 563


>gi|59800841|ref|YP_207553.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae FA 1090]
 gi|240013713|ref|ZP_04720626.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae DGI18]
 gi|240016153|ref|ZP_04722693.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae FA6140]
 gi|240112507|ref|ZP_04726997.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae MS11]
 gi|240117534|ref|ZP_04731596.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae PID1]
 gi|240120783|ref|ZP_04733745.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae PID24-1]
 gi|240127792|ref|ZP_04740453.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           gonorrhoeae SK-93-1035]
 gi|254493311|ref|ZP_05106482.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268598576|ref|ZP_06132743.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268603236|ref|ZP_06137403.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268686187|ref|ZP_06153049.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|75356288|sp|Q5F9J6|HISZ_NEIG1 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|59717736|gb|AAW89141.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|226512351|gb|EEH61696.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268582707|gb|EEZ47383.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268587367|gb|EEZ52043.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268626471|gb|EEZ58871.1| histidyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 383

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 76/410 (18%), Positives = 137/410 (33%), Gaps = 53/410 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLPNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+       L    +K  D    + +   + GI   +      
Sbjct: 123 LQAGAEMYGFADIRGDIELI-----DLMLKSMKIADMGKVLLSLGHI-GIFRALSDAAHL 176

Query: 189 KLNERLIVLRAIDKLDKFGLQ-GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
              +   +L  +   D   ++  VK    +G    +                        
Sbjct: 177 DAGQSAALLALMQDKDTGSVEAQVKAWKLDGMWAKAFSLLPRL---------------YG 221

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + + +    +    A     +EL  + +      +  N I I  + +R   Y+TG +Y
Sbjct: 222 GREVLSDARGRLPDLSAVGGALDELQAVCD-----AFPDNEIHIDLSELRVDNYHTGLLY 276

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E 
Sbjct: 277 AAYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAVER 325

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                          +  D++     +   + LR  G    +  G   N 
Sbjct: 326 QP------------AVLVDAEDAEAAREAVEALREQGQCVVIDYGIGHNV 363


>gi|288818560|ref|YP_003432908.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787960|dbj|BAI69707.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308752150|gb|ADO45633.1| prolyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 569

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 63/537 (11%), Positives = 141/537 (26%), Gaps = 87/537 (16%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     ++  G         R+  +I + +R   +  G   +   +L  ++ L +     
Sbjct: 28  KGGFIKQVASGIYAFTPAGYRVLKKIENIVRKEMDRSGAQELLLTVLNPAE-LWRETGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY----DLTAPLARYVAENFDTIV----FPCRTYRIGPVF 115
           D   + +F+L+D  G+   L      ++T  + R    ++  +          +R     
Sbjct: 87  DLYGRELFTLKDRHGRDYCLGPTHEEEIT-DMVRTFVNSYRQLPFILYQIQVKFRDEKRP 145

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R        F        D    SA  +   M        + + +K       +     +
Sbjct: 146 RFGLIRGREFIMKDAYSFDTDEFSALMSYETMKFAYERIFKKLRLKTLMVEASVGAIGGM 205

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
                 I     +       V            + VKL  G+   +     T+     + 
Sbjct: 206 SSHEFVILTDYGE-----ARVAYCESCGYSANAEIVKLNKGKEEEEEERQLTRVHTPNTR 260

Query: 236 QIDIMVSFLSIDLEKSMHE----------------LYELVKGTIAGEKGFNEL-----VV 274
            I+ + SFL +   K +                    E+ +  +                
Sbjct: 261 TIEELSSFLKVPPRKILKSVLYIVNGEPLLVVIRGDREIDENKLEALLNTENFRLATDEE 320

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           +  L +          I   +    +     +  A++ F   +        G     G +
Sbjct: 321 VYALFKTQRGYIGPFNIPKDVRVIWDNSVYGIKNAVVAFNEPDYHYINANPGRDFSYGEF 380

Query: 335 DGLVSRFKGQNVPAT-------------------------------------------GF 351
             +    +    P                                              +
Sbjct: 381 FDVAQVVEKDPCPKCGAPLKVSKGLELGHIFLLGTRYSLPMKAFYKDQQGEDKPIYMGCY 440

Query: 352 SIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
            IGISR + A+               +      +I     D++  +  +      +  G+
Sbjct: 441 GIGISRCMSAIVEQYSDELGIKWPTVVAPFELNVICLNPSDAEQKTVAEKIYYQAQEMGL 500

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              ++     + G +   AD    P  I+ G      G ++++    G++L   I++
Sbjct: 501 DV-IYDDREASAGFKFADADLCGFPYRIVVGKKT-KEGKVELQKRHTGEKLDVPIED 555


>gi|70998472|ref|XP_753958.1| protein kinase (Gcn2) [Aspergillus fumigatus Af293]
 gi|66851594|gb|EAL91920.1| protein kinase (Gcn2), putative [Aspergillus fumigatus Af293]
          Length = 1592

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 70/470 (14%), Positives = 140/470 (29%), Gaps = 49/470 (10%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ +++ + + +  I+  +G        +E +  +    P       G   L D  G  +
Sbjct: 995  ELLVQSLVKERLTAIFRRHG-------AVETTRQML--FPRSQHYRSGAVRLLDASGNQL 1045

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
             L +DLT P AR ++    ++               E       R   + D D V  +  
Sbjct: 1046 QLPFDLTLPNARSISRQDPSLEKTFAFG----TVYREMPHGSEPRTHKEVDFDIVSHNTL 1101

Query: 142  TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
                ++ +  A+ ++ +     ++         L        ++  D L   +   R   
Sbjct: 1102 ----DLALKEAEVIKVLDEIIEEF-------PPLRSSPMSFLINHSDLLQLIMEFCRITP 1150

Query: 202  KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                   + +  L     T         +         +      D   +  +    ++ 
Sbjct: 1151 SQVPLVKEIISKLNFGKWTMQKIRSELRSPAIGVASTSLDDLARFDFRDTPKQAQNRLRS 1210

Query: 262  TIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRGLEYYTGCVYEAILGFPVMNEKQ 320
             + G +    L  I   +           +     V  L       +   + F  + + +
Sbjct: 1211 VMEGTEFAERLSPIFARINILVTYLQGFDVKRKVYVNPLGSLNDKFFRGSILFQCVFDTK 1270

Query: 321  KPVVFGSVGGGGRYDGLVSRFK------GQNVPATGFSIGISRLIVALKS---------- 364
            +  VF     GGRYD LV  F+           A GF++   RL  A+            
Sbjct: 1271 RRDVF---AAGGRYDRLVQEFRPKGRASCSQTHAVGFNLSWDRLSSAMLEYLKSTTKATT 1327

Query: 365  --LESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
               ES      +     +     D+    +      Q L  + I AE+ + +S +    L
Sbjct: 1328 KHAESDAGAFWKTRRCDVLVASFDATVLRTTGVKLVQHLWASDISAELAVDAS-SLEELL 1386

Query: 422  KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
                  N    +I     + RG  +++ LA  +EL         W    +
Sbjct: 1387 SEYKEHNHSWIVIAKQDSKERG-FKVRCLAPREELDIRSSELIPWLRNEI 1435


>gi|329889349|ref|ZP_08267692.1| prolyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328844650|gb|EGF94214.1| prolyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 438

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 57/473 (12%), Positives = 126/473 (26%), Gaps = 79/473 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  +I   +R+     G   +  P L+ +D L +     D  
Sbjct: 31  MIKQEAAGIYAWLPLGLRVLRKIEGIVRDEQVKAGAVELLMPTLQLAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  + D   + +       ++   + R   +++  +      + I   FR+E+    
Sbjct: 90  GPEMLRITDRHERELLYGPTNEEMVTDIFRAYVKSYKALP--LNLFHIQWKFRDERRPRF 147

Query: 120 --HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
                  F        D   +SA  A   M     +T   +G+K                
Sbjct: 148 GVMRGREFLMKDAYSFDLDEASARIAYKRMFAAYLNTFARLGLKAV-------------- 193

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
                                            ++   G    D S +F   A     ++
Sbjct: 194 --------------------------------PMRADTGPIGGDLSHEFIVLAETGESEV 221

Query: 238 ---DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +V   +     S+ +L  +     A      E+   ++   ++            
Sbjct: 222 FCDRKLVEMAAPGHNLSVEQLEGVFNERTALYAATEEMHDAAQFETQTAEGDRLSARGIE 281

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +     + T             N +   V  GS G G             +     +   
Sbjct: 282 VGHIFYFGTKYSAAMKAKVAGPNGQDTEVHMGSYGVGVSRLLGAIIEASHDEGGIIW--- 338

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
                          +++     V+I     D    +  +     L   G    ++  + 
Sbjct: 339 --------------PDSVAPFDVVVINLRASDEAVSAACEDAVAKLEALGKDV-LYDDTD 383

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           +  G +   AD    P  +  G    + G++++K  A G++ S  +       
Sbjct: 384 ERPGGKFATADLIGVPWQLTIGPKGLADGVVELKRRATGEKQSLSLDAALELL 436


>gi|83592911|ref|YP_426663.1| prolyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|114152243|sp|Q2RU19|SYP_RHORT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83575825|gb|ABC22376.1| Prolyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 435

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/458 (10%), Positives = 115/458 (25%), Gaps = 62/458 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  +     +R+  +I   +R   +  G   I  P ++ +D L +     D  
Sbjct: 31  MIRQHASGIYNWLPLGLRVLRKIEQVVREEQDATGAQEILMPTIQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  + D   + +                                             
Sbjct: 90  GKEMLRIVDRHERDM----------------------------------LYGPTHEEVAT 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              + +V +  +  +           +     G+ R                 E +    
Sbjct: 116 DVFRKNVKSYRALPQNLYQIQWKFRDEVRPRFGVMRGR---------------EFLMKDN 160

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                       + +K+    L+    L  +     +     G  L+ E I      L+ 
Sbjct: 161 YSFDLTYEGARHSYNKMFVAYLRTFARLGLKAIPMAADTGPIGGKLSHEFI-----ILAD 215

Query: 247 DLEKSMHELYELVKGT-IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             E ++    +L+           ++L  + +        ++ +      V   +  +  
Sbjct: 216 TGESAVFCHRDLLDKPAPENVDYDSDLQPLVDSWTSLYAATDEMHRPDHGVPEGDLVSAR 275

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
             E    F    +   P+           DG        +       +    +  +    
Sbjct: 276 GIEVGHIFHFGTKYSAPMGATVTAP----DGSSQAVFMGSYGIGVSRLVAGIIEASHDDN 331

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +      + +  +     +           LR AG          +  G +    
Sbjct: 332 GIIWPDGVAPFDIGVINLKVGDAATDGVCADLYGRLRAAGKDVLFDDTDDRA-GAKFATM 390

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           D    P  +I G    ++GM+++K+ A G+     I +
Sbjct: 391 DLIGLPWQVIAGPKGVAKGMVELKERATGERHELSIDS 428


>gi|237734884|ref|ZP_04565365.1| ATP phosphoribosyltransferase regulatory subunit [Mollicutes
           bacterium D7]
 gi|229382212|gb|EEO32303.1| ATP phosphoribosyltransferase regulatory subunit [Coprobacillus sp.
           D7]
          Length = 326

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 130/360 (36%), Gaps = 50/360 (13%)

Query: 15  FADCPTKEIR--------IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           F     +E              I +S+R I+    ++ +  P  EY D   +   D    
Sbjct: 4   FKYLIPEESIDAIITNVSKLREIENSLRAIFAKNNYNEVLMPSFEYVDLYTQL--DCGFE 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F   + +G+ +++R D T PLAR+ + N +      R    G V+R E    GR  
Sbjct: 62  QEKMFQYINHEGKNVAMRCDFTIPLARFYSTN-NYGDEEARYCYFGKVYRKETMHKGRSS 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +       D E   M+ ++L  +G+K     IG            ++    
Sbjct: 121 EFFQGGVELINKPGIAGDKECLNMIQESLPHLGLKNILVEIGSAR------FFNRLCTLV 174

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            DK  E   +L+  D      +  +K  + +   D   +            ++++   + 
Sbjct: 175 GDKAVELTEILKYRD------ISEMKKFVADNEFDGQLN------------ELLLKLPTA 216

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             + ++ +            K    L  +   +     N   I     +V  ++YYTG +
Sbjct: 217 FGDITLLDTAIKGINDEILLKALERLKELYNSLD----NKESIIFDLGMVPTMKYYTGLM 272

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            +                   +  GGRYD L+ RF  +NV A GF   ++ ++ A+    
Sbjct: 273 IKGYSDKSAQ----------PIISGGRYDDLLPRFN-KNVGAIGFCYHMNHILKAIDKQG 321


>gi|169350303|ref|ZP_02867241.1| hypothetical protein CLOSPI_01047 [Clostridium spiroforme DSM 1552]
 gi|169293086|gb|EDS75219.1| hypothetical protein CLOSPI_01047 [Clostridium spiroforme DSM 1552]
          Length = 325

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 121/360 (33%), Gaps = 50/360 (13%)

Query: 15  FADCPTKEIR--------IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           F     +E              I + +RNI+    +  +  P  EY D   +   D    
Sbjct: 4   FKYLIPEESIDAIISNVSRLREIENDLRNIFSKNNYKEVLMPSFEYVDLYKQL--DSGFE 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F   + +G+ +++R D T PLAR+ + N        R    G V+R E    GR  
Sbjct: 62  QEKMFQYINHEGKNVAMRCDFTIPLARFYSTNSYE-NEEARYCYFGKVYRKETMHKGRSS 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +F Q  V+ +  +    D E   M+ ++L  +G+      +G            ++    
Sbjct: 121 EFFQGGVELINKAGIAGDKECLNMIQESLPHLGLSNILIELGSA------AFFNRLC--- 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                           L       +K +L          F    N  S+   ++++  + 
Sbjct: 172 ---------------SLVGDNTDELKEILKYRDISKMKRFVAKNNFDSKLNSLLLTLPTA 216

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                  E           ++    L  +   +     N   I     +V  ++YYTG +
Sbjct: 217 FGSLESLEPIIANIDDEILQEAMKHLKELYNSLD----NQQSIIFDLGMVPTMKYYTGLM 272

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            +                   +  GGRYD L+ RF  +NV A GF   ++ ++ AL    
Sbjct: 273 IKGYSDKCAQ----------PIISGGRYDDLLPRF-NKNVGAIGFCYHMNHILKALDKEG 321


>gi|238019811|ref|ZP_04600237.1| hypothetical protein VEIDISOL_01686 [Veillonella dispar ATCC 17748]
 gi|237863335|gb|EEP64625.1| hypothetical protein VEIDISOL_01686 [Veillonella dispar ATCC 17748]
          Length = 544

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 129/355 (36%), Gaps = 39/355 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ +LP GF D        ++ +   +  +  +  +  I TPL+EY D    +       
Sbjct: 13  IQQQLPTGFRDDIGAVAERKDDVSQYVLGLCRSRQYTKISTPLVEYKDVFNGYAMGR--- 69

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + ++   D   + + +R DLT P+ R++A     +      Y +G VF   K   G   
Sbjct: 70  GQHMYEFMDSSDESVVIRPDLTMPIGRFLATTNIELPRTF--YYLGDVFMKNKKHRGDVN 127

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           Q  Q  ++ VG     A+ E   ++ +  E      N+  + I + +    I + +GL  
Sbjct: 128 QVTQGGIELVGYEGIEAEQECFAIIKEVNETQ--LGNNLLLEIGDARFSRAITDALGLSD 185

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +K          +D L    L     L+ + +      F                 +  
Sbjct: 186 KEKSE-------LLDALFTKYLPRYNELISDFKNSALYPFLT---------------VWP 223

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L  ++ ++ + +   I        L  + ++  +      +++I  +      YYTG  
Sbjct: 224 RLFGTVQDIKDELNKIILPAAAQRILDNLVDMANQVAQTGQQVRIDVSTEPLQSYYTGLT 283

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           +   +            V   +  GGRYDGL+S F G  +PA G +  I  L   
Sbjct: 284 FRGYV----------DGVSQYIVSGGRYDGLLSSFDGTPMPAVGMAFNIDVLTDV 328


>gi|261400148|ref|ZP_05986273.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria
           lactamica ATCC 23970]
 gi|313668708|ref|YP_004048992.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           lactamica ST-640]
 gi|269210143|gb|EEZ76598.1| ATP phosphoribosyltransferase, regulatory subunit [Neisseria
           lactamica ATCC 23970]
 gi|313006170|emb|CBN87632.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           lactamica 020-06]
          Length = 383

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 76/408 (18%), Positives = 136/408 (33%), Gaps = 49/408 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EYS SL   + D     K 
Sbjct: 5   QLPEHIADVLPTNARQLESARERLLALFRVHGYELVQPPLMEYSHSLLTHI-DAGLSLKT 63

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  +    G+ + +R D+T  +AR  A          R    GPV      G    R+ +
Sbjct: 64  ILVVDQLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHARPDGLSNMREPL 123

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L     
Sbjct: 124 QAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQS 181

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                ++    DK  +     VK    +G    +                          
Sbjct: 182 ATLLALM---QDKDTRAVEAQVKAWKLDGMWAKAFSLLPRL---------------YGGR 223

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +      +    A     +EL  + +      +    I I  + +R   Y+TG VY A
Sbjct: 224 EVLSAARGRLPDLSAVGNALDELQAVCD-----AFPDCEIHIDLSELRVDNYHTGLVYAA 278

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                            +V  GGRYDGL   F  +  PATGFS  +   I  L ++E   
Sbjct: 279 YAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAIERQP 327

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                        +  D++     +   + LR  G    +  G   N 
Sbjct: 328 ------------AVSVDAEDAEAAREAIETLRAQGQCVVIDYGIGHNV 363


>gi|307294837|ref|ZP_07574679.1| tRNA synthetase class II (G H P and S) [Sphingobium
           chlorophenolicum L-1]
 gi|306879311|gb|EFN10529.1| tRNA synthetase class II (G H P and S) [Sphingobium
           chlorophenolicum L-1]
          Length = 376

 Score = 81.8 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 11/195 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL---GKFLPDEDRPN 67
           LP G +D          R+   + +   ++G++ +  P+ E+ D+L    K +  +D   
Sbjct: 9   LPEGLSDRLPPLAEDSARLARRVLDTVASHGYERVMPPIAEFEDTLVGRLKSMKAQDLVR 68

Query: 68  KGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                  D    + ++LR D+TA + R  A    T   P R    GPV R   +     R
Sbjct: 69  A-----IDPVSQRSLALRPDMTAQVGRIAATRLATAPRPLRLSYAGPVIRLRANQLRPER 123

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q   + +GS +  A  E+  +  + L+A G+      I      ++D +        
Sbjct: 124 ERFQVGAELIGSDSVAAAVEIVNVAIEALQAAGVTG--ITIDFTLPDLIDALAAGPLPLA 181

Query: 187 DDKLNERLIVLRAID 201
            +++      L A D
Sbjct: 182 PEEIEAVRTELDAKD 196


>gi|50305443|ref|XP_452681.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641814|emb|CAH01532.1| KLLA0C10802p [Kluyveromyces lactis]
          Length = 1672

 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 78/491 (15%), Positives = 158/491 (32%), Gaps = 63/491 (12%)

Query: 17   DCPTKEIRIRNRILDSIRNIYENYGFDPI-ETPLLEYSDSLGKFLPDEDRPNKGVFSLQD 75
            D       +R +++D +  I+  +G     E P++        F        + V+ + D
Sbjct: 1043 DTTPFLQLLRAQMVDEVIKIFRRHGAIENNEPPII--------FPKAPIYSTQNVYEVLD 1094

Query: 76   DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGRFRQFIQCDV 133
              G  + L+YDLT P+ARY+++N +T     R           +    P +F +     +
Sbjct: 1095 RGGSVLQLQYDLTYPMARYLSKNPNTTSKQYRMQYVFRPSESTHSSTEPRKFGEVDFDII 1154

Query: 134  DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI-GINNRKILDGILEKIGLHGDDKLNE 192
             N  + +   DAE   ++ + +    +  N   I  IN+  ILDG+     +    +   
Sbjct: 1155 SNSSTDSAVHDAECLKVVDEIVSTFPVFTNTNTILVINHADILDGVFNFCNIDKAQRSLV 1214

Query: 193  RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              ++ +                 G    D   D     N++S  ++ +  F   D    +
Sbjct: 1215 SHMLSQLG--------------FGRAFKDLKIDLRSQLNISSTSLNDLELF---DFRSDL 1257

Query: 253  HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV-RGLEYYTGCVYEAIL 311
                + +   +        +      V K       + ++  +V   L  Y    Y+  +
Sbjct: 1258 ETSKKRLSKLLVDSPYLKRIEEAFGYVSKVVDYFKPLGVTRNVVISPLSNYNNGFYKGGI 1317

Query: 312  GFPVMNEKQKPVVFGSVGGGGRYDG-------LVSRFKGQNVPATGFSIGISRLIVALKS 364
             F  + +  +      +  GGRYD                   A GF++    + + +K+
Sbjct: 1318 MFQSVFDNGRTRSL--ISAGGRYDNLISLIARPSGGKLNHIQKAVGFNLAWETMFLIVKN 1375

Query: 365  L---------------ESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAE 408
                                NN  +     +      +  L+         L  AGI A+
Sbjct: 1376 YFKLAGGRTNKKFTKSIKVGNNEWKPKRCEVLVSSFSNSILNTVGIEVVSKLWKAGISAD 1435

Query: 409  MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS-RGM------LQIKDLAKGKELSREIK 461
            +  G   +  + +  A +      ++      S          L+IK+L+   +   +I 
Sbjct: 1436 IVRGC-FSVEDVITSAQKDGVDWIVLIKQQSYSIANTKRKYKPLKIKNLSTNFDADMDID 1494

Query: 462  NNESWREARVA 472
               S  E    
Sbjct: 1495 EFLSLYEDSFN 1505


>gi|222085595|ref|YP_002544125.1| prolyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221723043|gb|ACM26199.1| prolyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 475

 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/452 (12%), Positives = 125/452 (27%), Gaps = 61/452 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR      G   +  P L+ ++ L +     D   K +  +
Sbjct: 73  GIYSWLPLGKRVLDKVNKIIREEQNRSGAIELSMPTLQSAE-LWQESGRYDAYGKEMLRI 131

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D   + +       ++   + R   +++  +      Y I   FR+E        +  +
Sbjct: 132 KDRQDRPMLYGPTNEEMITDIFRSSVKSYKDLP--LNLYHIQLKFRDEIRPRFGTMRSRE 189

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S   T +  +                                           
Sbjct: 190 FMMKDAYSFDLTQEGAVIAYN--------------------------------------- 210

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                 LR  D+L    +  ++   G    + S +F   A+    ++     F++ D+  
Sbjct: 211 KMFAAYLRTFDRLGLRAI-PMRADTGPIGGELSHEFIILADTGESEVFCHKDFVNFDIPS 269

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                ++ V G       +  L   +  +      +   +      RG+E      +   
Sbjct: 270 E-DTNFDDVAGLKGIFDKWTSLYAATSEMHDEATFNAIPEGERLSARGIEVGHIFYFGTK 328

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              P+  + Q P            DG        +       +  + +  +         
Sbjct: 329 YSEPMGAKVQGP------------DGKEHAVHMGSYGIGPTRLVPAIIEASHDENGIIWP 376

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                  V++  M     +           L  AG          +  G +   AD    
Sbjct: 377 ASVAPFDVVVINMKSGDQACDAACETIYAALSKAGKDVLFDDRDDRA-GTKFATADLIGV 435

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           P+ II G    + G +++KD   G   +  ++
Sbjct: 436 PVQIIVGPRSIAGGEVEVKDRKTGARETMTVE 467


>gi|164659914|ref|XP_001731081.1| hypothetical protein MGL_2080 [Malassezia globosa CBS 7966]
 gi|159104979|gb|EDP43867.1| hypothetical protein MGL_2080 [Malassezia globosa CBS 7966]
          Length = 1001

 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 66/471 (14%), Positives = 137/471 (29%), Gaps = 60/471 (12%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--VFSLQDDDGQWISLRYD 86
           +  ++R I++  G  P+  PLL          P  D  +    + SL D  G  + L +D
Sbjct: 370 VCRTLREIFQCRGAVPVHPPLL---------FPPSDVYSTEPNMVSLLDKTGNVVFLPFD 420

Query: 87  LTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
           LT P AR  A +  T              +    +        +     +    +   ++
Sbjct: 421 LTVPFARICARSGHTRFKRFDISDVYRENLLAGGQPRAVLAASYDIISQE----ADPASE 476

Query: 145 AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
           AE+  +M + L   G+    + + +++  IL   LE                 R   +  
Sbjct: 477 AEILALMDELLSIPGLAGETWTVELSHEMILRTFLE-----------------RFPSRFH 519

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKSMHELYELVKGTI 263
              L+ +   L  G           A L +  +D + ++ L  D + ++H+L  L+    
Sbjct: 520 AVLLEALPSYLARGSDVRVRQQLSSAGLPATLLDEIDAWNLRGDFDPTVHQLMSLLTPVE 579

Query: 264 AGE--KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI-LGFPVMNEKQ 320
                +    L  ++ L R+ G +     +         Y  G +     +     +   
Sbjct: 580 RARLAEPLAYLSQVTRLARQFGMHHPLCLVPLFSHTHKHYRNGTMMAVTKMMNGGKHRDI 639

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN--------- 371
             V          +    +    +   A G  I + +++ A+   +              
Sbjct: 640 LAVGGRYDELLRCFAYPQTTHTPEEQHAVGLQIAVGKMVKAVARYQKVYVPRFLGRPEQE 699

Query: 372 ----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL----GSSKNFGNQLKY 423
                                 L         L  +GI A++      G S         
Sbjct: 700 RTLGPWTPRRCECYIASSQPGLLDAKIQVCTTLWASGISADLQYECGAGESPEITA--ST 757

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                    ++         +L++K++    E          +   R+A+ 
Sbjct: 758 CRAEGILFLVLVR---MHTSVLKVKEVITRTEHEVARDELTVFLHDRIARQ 805


>gi|148560203|ref|YP_001258799.1| prolyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|166980104|sp|A5VQ02|SYP_BRUO2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148371460|gb|ABQ61439.1| prolyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 442

 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 125/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVFMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 339 IWPKAIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S +I+
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLDIE 432


>gi|254172046|ref|ZP_04878722.1| threonyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033942|gb|EEB74768.1| threonyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 624

 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 57/204 (27%), Gaps = 1/204 (0%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL  I            R                    A+    +  E  +         
Sbjct: 403 ELAKIIGKPVLIEMWDQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERFGITYYDE 462

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
            G+    +      +         I      L++          + P+ +  +    D +
Sbjct: 463 EGKERYPLILHCSPSGAIERVMYAILEKQAKLQAQGKKPAFPLWLSPIQVRVIPVSDDVM 522

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                    L  A IR ++   + +    +++ A++   P  I+ G  E+ +  + ++  
Sbjct: 523 DYALYVAGKLEGAKIRVDVDDTNDR-LNKKIRKAEKEWIPYIIVVGKNEKEQNTVTVRRR 581

Query: 451 AKGKELSREIKNNESWREARVAQI 474
             GK+L  ++++       +    
Sbjct: 582 EDGKQLEMQLEDLIREIRQKTEGF 605


>gi|325203897|gb|ADY99350.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
          Length = 383

 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 136/409 (33%), Gaps = 51/409 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLLNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L    
Sbjct: 123 LQAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK        VK    +G    +                         
Sbjct: 181 SATLLALM---QDKDTGTVEAQVKAWKLDGMWAKAFSLLPRL---------------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +    A     +EL  + +      +    I I  + +R   Y+TG +Y 
Sbjct: 223 REVLSDARGRLPDLSAVGGALDELQAVCD-----AFPDCEIHIDLSELRVDNYHTGLLYA 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E  
Sbjct: 278 AYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAIERQ 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         +  D++     +   + LR  G    +  G   N 
Sbjct: 327 P------------AVLVDAEDAEAAREAVEALREQGQCVVIDYGIGHNV 363


>gi|254670642|emb|CBA06673.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis alpha153]
          Length = 383

 Score = 81.4 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 135/409 (33%), Gaps = 51/409 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLLNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L    
Sbjct: 123 LQAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK        VK    +G    +                         
Sbjct: 181 SATLLALM---QDKDTGTVEAQVKAWKLDGMWAKAFSLLPRL---------------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +    A     +EL  + +      +    I I  + +R   Y+TG +Y 
Sbjct: 223 REVLSDARGRLPDLSAVGGALDELQAVCD-----AFPDCEIHIDLSELRVDNYHTGLLYA 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E  
Sbjct: 278 AYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAIERQ 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         +  D++         + LR  G    +  G   N 
Sbjct: 327 P------------AVLVDAEDAEAAHEAVEALREQGQCVVIDYGIGHNV 363


>gi|241762174|ref|ZP_04760257.1| tRNA synthetase class II (G H P and S) [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373424|gb|EER63024.1| tRNA synthetase class II (G H P and S) [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 371

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 3/153 (1%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    +    +R+L  +      +G++ +  PL E+ +SL   L    +  + +
Sbjct: 8   LPEGLRDRLPPQAEAASRLLHHVIVAINRHGYERVSPPLAEFEESLLGRLKSARK--QDL 65

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
               D    + ++LR D+T  + R      +    P R    G V +         R+ +
Sbjct: 66  LRFVDPVSQRSLALRPDITGQIGRIATTRLNHRPRPLRLAYGGTVMKLRATQLRPERELM 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
           Q   + +G+ +  A  E+  M  +TL+  G+K 
Sbjct: 126 QAGAELIGNDSVAAVIEILGMAVETLKIAGVKE 158


>gi|56552582|ref|YP_163421.1| tRNA synthetase class II (G H P and S) [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260753762|ref|YP_003226655.1| tRNA synthetase class II (G H P and S) [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|56544156|gb|AAV90310.1| tRNA synthetase class II (G H P and S) [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258553125|gb|ACV76071.1| tRNA synthetase class II (G H P and S) [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 371

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 3/153 (1%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    +    +R+L  +      +G++ +  PL E+ +SL   L    +  + +
Sbjct: 8   LPEGLRDRLPPQAEAASRLLHHVIVAINRHGYERVSPPLAEFEESLLGRLKSARK--QDL 65

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
               D    + ++LR D+T  + R      +    P R    G V +         R+ +
Sbjct: 66  LRFVDPVSQRSLALRPDITGQIGRIATTRLNHRPRPLRLAYGGTVMKLRATQLRPERELM 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
           Q   + +G+ +  A  E+  M  +TL+  G+K 
Sbjct: 126 QAGAELIGNDSVAAVIEILGMAVETLKIAGVKE 158


>gi|212223522|ref|YP_002306758.1| threonyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|229558459|sp|B6YTH4|SYT_THEON RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212008479|gb|ACJ15861.1| Threonyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 627

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 58/204 (28%), Gaps = 1/204 (0%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL  I            R                    A+    +  E  +         
Sbjct: 406 ELAKIIGKPVLIEMWKQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERFGITYYDE 465

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
            G+    +      +         I      L+S          + P+ +  +    + L
Sbjct: 466 DGKEKYPLILHCSPSGAIERVMYAILEKQAKLQSKGIKPMFPLWLSPIQVRVIPVSEEVL 525

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                    L  A IR ++   S +    +++ A++   P  I+ G  E+ +  + ++  
Sbjct: 526 DYALYVAGKLEGAKIRVDVDDTSDR-LNKKIRKAEKEWIPYVIVVGRNEKEQNTITVRRR 584

Query: 451 AKGKELSREIKNNESWREARVAQI 474
           + GK+   ++++      ++    
Sbjct: 585 SDGKQGEMQLEDLIREIRSQTEGF 608


>gi|302871723|ref|YP_003840359.1| Histidine--tRNA ligase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574582|gb|ADL42373.1| Histidine--tRNA ligase [Caldicellulosiruptor obsidiansis OB47]
          Length = 393

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 119/340 (35%), Gaps = 50/340 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK          F D       +   I +   ++++ +G+  +E    E  +      
Sbjct: 1   MSKK----------FVDYYPPTSEMLEEIREKTLSLFKKFGYKIVEPSTFEDYEKSKSLN 50

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            +            D DG  ++LR + T  +A  +A    T V+P +    G  ++  + 
Sbjct: 51  GNNTI------KFMDSDGAVLALRNEFTPKVA-EIAAKLQTNVYPLKYCYFGRAYQFIQQ 103

Query: 121 GPGRFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
             G  R+F Q  ++N   S       E+ ++  ++L  +G+    + I +       GI 
Sbjct: 104 EAGDLREFFQAGIENFNISDSFYIDLEVLVLAVESLRELGVNG--FTIDVGEVNFFKGIA 161

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +  G+          ++ R +DK D  G++               +F     ++ + ID+
Sbjct: 162 KDCGIDEAS----SEVLCRLVDKKDYIGIE---------------NFLIRKGISQKVIDV 202

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
             S   +   +   +  +        +     L  I   + K GY    I I   +V+ L
Sbjct: 203 FRSLTRLYGREDKIKEAKKFANNEISKLAIERLSEIYNNIVKLGY-QRYITIDFGMVKHL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
            YYTG ++   L                V  GGRYD L  
Sbjct: 262 NYYTGIIFSGYLPQLGY----------PVLNGGRYDNLCE 291


>gi|156065223|ref|XP_001598533.1| hypothetical protein SS1G_00622 [Sclerotinia sclerotiorum 1980]
 gi|154691481|gb|EDN91219.1| hypothetical protein SS1G_00622 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1586

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 61/438 (13%), Positives = 133/438 (30%), Gaps = 38/438 (8%)

Query: 7    LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            +    P G  D       ++  +   + +I+ N+G   +ETP    S       P  D  
Sbjct: 996  MGVPTPSG-NDLL-----LQGLVKQKLISIFRNHGA--VETP---RSILF----PSCDHY 1040

Query: 67   NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                  L D  G  + L YDLT P AR +A+    +        +     +         
Sbjct: 1041 GINAVQLLDKSGTLLQLPYDLTVPNARAIAKYQPPVERSFAFGTVFRDKHDGAAPQTFSE 1100

Query: 127  QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                    +    A      + ++         +  +     +N+  +L  I +   +  
Sbjct: 1101 VDFDVVTSDSLDLALKEAEVIKVLDEIVASFPSLPSSQMCFHVNHADLLGLIFDFCRI-- 1158

Query: 187  DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +  + +      +   + ++  Q ++  L           +    +++  ++ +  F   
Sbjct: 1159 EPSIRQAAADTLSKLNVQQWTWQKIRAELR----------SPLVGVSATSVEDLQRFDFR 1208

Query: 247  D-LEKSMHELYELVKGTIAGEKG---FNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            D   K+  +L  + +GT   EK       L  + E  ++              ++   Y 
Sbjct: 1209 DTPSKAFQKLKVIFEGTEMFEKASSSIAHLRDVIEYTKRFEVQRKIYVHPLGSLKEKFYK 1268

Query: 303  TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS----RL 358
             G ++  +    + +       + S+    R+   ++  +        +           
Sbjct: 1269 GGVLFSCLYDRKIRDVFAAGGRYDSLIRENRHHKNINEERHAVGFNLAWEKMARLPKSNS 1328

Query: 359  IVALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
               LK  +     I       +    HD+    S        L +  I AE+    S++ 
Sbjct: 1329 KSFLKKPDEEAQGIWSTKRCDVLVASHDAAILRSTGVELVSNLWSHDISAELA-RDSRSP 1387

Query: 418  GNQL-KYADRRNCPLAII 434
             + L KY D     + II
Sbjct: 1388 EDLLSKYRDDSYSWIVII 1405


>gi|188997600|ref|YP_001931851.1| prolyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|226701347|sp|B2V6W5|SYP_SULSY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188932667|gb|ACD67297.1| prolyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 564

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 60/503 (11%), Positives = 125/503 (24%), Gaps = 73/503 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +++  +I + IR   ++ G   +  P+L  ++ L K         K +F L
Sbjct: 38  GIYEYLPLGLKVLRKIENIIRKHMDDSGALEVLLPILTPAE-LWKETGRWHVYGKELFRL 96

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +D      +L         DL     R   +           +R     R        F 
Sbjct: 97  KDRKDAEFALGPTHEETITDLVRKNVRSYKDLPLNFYQIQTKFRDEARPRYGLIRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D     A+     M        + +G+        +            + +  
Sbjct: 157 MKDGYSFDVSEEDAKKTYEVMKEAYHKIFKELGLDYLMVEADVGAIGGKFSHEFVVKVPS 216

Query: 187 DDKLNERLIVL----------RAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSE 235
            +                       KL     + ++ +   + ++           LT  
Sbjct: 217 GEAHIVYCEKCGYAANVEAAKFHHHKLPPEEPKPIEKVYTPDIKSVEDVANFLNVPLTKL 276

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGE--KGFNELVVISELVRKSGYNSNRIKISS 293
              ++      D    +      +  T      K  +  +   E +   G     +    
Sbjct: 277 VKTLIYKIDDKDFVAVLIRGDRELNETKLANLFKAIDVRMATKEELESLGIPEGFVGPIG 336

Query: 294 TIVRGLEYYTGCV-YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--- 349
             +     ++    Y  ++G    +                +  L +  +G   P     
Sbjct: 337 LNLPIYADFSLKELYNIVVGANEKDYHYINANIDRDFKVSGFYDLATAKEGDPCPVCHLP 396

Query: 350 ----------------------------------------GFSIGISRLIVALKSL---- 365
                                                    + IG+SRLI A+       
Sbjct: 397 LKETTGLEVGHIFLLGTKYSESMKAYFVDKDGKEKSIIMGCYGIGVSRLISAIVEQYHDD 456

Query: 366 -ESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                        V I  +   D +SL+      + L+  G+   +     ++ G + K 
Sbjct: 457 KGIIWPENLAPFNVHILVLNPKDQESLNVGFDIYKKLKEKGLDVLLD-ERDESAGAKFKD 515

Query: 424 ADRRNCPLAIIQGTGERSRGMLQ 446
           AD    P  I+ G      G ++
Sbjct: 516 ADLIGIPHRIVIGKA-LKEGKVE 537


>gi|68487315|ref|XP_712485.1| likely ribosomal eIF2-alpha kinase [Candida albicans SC5314]
 gi|77022624|ref|XP_888756.1| hypothetical protein CaO19_6913 [Candida albicans SC5314]
 gi|46433875|gb|EAK93302.1| likely ribosomal eIF2-alpha kinase [Candida albicans SC5314]
 gi|76573569|dbj|BAE44653.1| hypothetical protein [Candida albicans]
          Length = 1764

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 64/428 (14%), Positives = 140/428 (32%), Gaps = 30/428 (7%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            +  + ++I+  +  I+ N+G        +E  ++         +  + V+   D  G  +
Sbjct: 1115 DYLLFDKIMKELTKIFTNHG-------AIENLNTNLVLPKAPSQSRELVYDFLDRSGAVL 1167

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
            +L YDLT P AR++++   TI    R        V             F       V  +
Sbjct: 1168 TLPYDLTLPTARFLSKTDMTIPKTFRHEFVYRPNVRGIGIPDRYSAVNFDIAGGSEVNKA 1227

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK----IGLHGDDKLNERLI 195
               A    C+ + D +        +  I IN+  ILD ++      IG+    KL+   +
Sbjct: 1228 TLFAHDAECLKVIDEIVNTLPCFKNTIIVINHYDILDAVVSFSFGNIGIDDKKKLDIFGV 1287

Query: 196  VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
            + +         ++       +     + D  +  N T E             +K M + 
Sbjct: 1288 LSQLGIDKSPDEIKRYLREDFQVPHTVTKDLVENFNFTCEVERARQKL-----QKLMVDS 1342

Query: 256  YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL-GFP 314
              L+K     E+ +  L+ + ++++ +   ++ I    +      Y  G +++A+     
Sbjct: 1343 PPLLK----VERAYTYLIEVVKILKHTNIKTSMIFNPLSNYNSKYYIHGIMFQAVFKPDR 1398

Query: 315  VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL------ESS 368
                 +             +  + +  K       GFS+  S L + +K+L      +  
Sbjct: 1399 SKRYTRVVTGGRYDSLIESFSNVTTTTKQITPHGVGFSLTTSLLFILMKTLISRGKSKLD 1458

Query: 369  TNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              N  +     +         LS+             I A++   ++K      +  +  
Sbjct: 1459 LVNKWKGNRCKVLISSTQQQFLSQVGYQLVSKFWNKNISADITSVAAKTQDEIFQNGNSE 1518

Query: 428  NCPLAIIQ 435
                 +I 
Sbjct: 1519 GAIWIVII 1526


>gi|326405264|ref|YP_004285346.1| ATP phosphoribosyltransferase regulatory subunit [Acidiphilium
           multivorum AIU301]
 gi|325052126|dbj|BAJ82464.1| ATP phosphoribosyltransferase regulatory subunit [Acidiphilium
           multivorum AIU301]
          Length = 378

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 3/139 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP GF D    +     R+ +++   +  +G+  ++ PL+E+  +L           +  
Sbjct: 12  LPAGFTDLLPPDAEAEARLTETLTASFGAHGYQRVKPPLVEFETTLLAGSG--AAVAEQT 69

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D    + + +R D T  +AR           P R    G             RQ  
Sbjct: 70  FRLMDPESQRMMGVRADTTPQIARIATTRLAAAARPLRLAYAGQCLLVRGSQLAPERQVA 129

Query: 130 QCDVDNVGSSAETADAEMC 148
           Q  ++ +G     ADAE+ 
Sbjct: 130 QAGIELIGPDVPEADAEII 148


>gi|241761006|ref|ZP_04759095.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260753028|ref|YP_003225921.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|241374625|gb|EER64086.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258552391|gb|ACV75337.1| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 443

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/476 (11%), Positives = 124/476 (26%), Gaps = 71/476 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  RI   IR      G   +  P L+ +D L +     D  
Sbjct: 31  MIRQTAAGIYAWLPLGLRVLRRIEKIIREEQARAGALELLMPTLQTAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   + +       ++   L R   +++  +       +             
Sbjct: 90  GPEMLRIKDRHNRELLYGPTNEEMITALIRDNLQSYRDLPRIFYHIQWKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR-KILDGI 178
                F        D   ++       M +   ++   +G++              L   
Sbjct: 150 MRGREFLMKDAYSFDIDETAGRHNYNRMFVAYLNSFSRLGLRAIPMQADTGPIGGDLSHE 209

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
              +  +G+  +                                            EQ  
Sbjct: 210 FIVLAPNGESDVFYHSNW--------------------------------------EQPT 231

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             +     D +     + + +    A ++  + L       +        +         
Sbjct: 232 RHIEADFDDPKALQSIVNDHISDYAATDEKRDPLREAQAGDKLRQSRGIEVGHIFFFGTK 291

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
                G         P  + K  P+  GS G G             +     +   ++  
Sbjct: 292 YSKPMG------FTLPGPDGKPIPIQMGSYGIGISRLLGAIIEASHDDNGIIWPEAVAPY 345

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            V L +L     N + +           +DSL +           GI       + +  G
Sbjct: 346 HVGLINLRIDDENCRAI-----------ADSLYQRLEAA------GIDTLYDDRNERG-G 387

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +    D    P  ++ G     +G++++K+ A G++ +  +++  +   A   Q 
Sbjct: 388 AKFATMDLIGLPWQVVIGPKGAEKGVVELKNRASGEKQTISVEDAFNLLTAGHQQR 443


>gi|148261768|ref|YP_001235895.1| tRNA synthetase, class II (G, H, P and S) [Acidiphilium cryptum
           JF-5]
 gi|146403449|gb|ABQ31976.1| tRNA synthetase, class II (G, H, P and S) [Acidiphilium cryptum
           JF-5]
          Length = 378

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 3/139 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP GF D    +     R+ +++   +  +G+  ++ PL+E+  +L           +  
Sbjct: 12  LPAGFTDLLPPDAEAEARLTETLTASFGAHGYQRVKPPLVEFETTLLAGSG--AAVAEQT 69

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F L D    + + +R D T  +AR           P R    G             RQ  
Sbjct: 70  FRLMDPESQRMMGVRADTTPQIARIATTRLAAAARPLRLAYAGQCLLVRGSQLAPERQVA 129

Query: 130 QCDVDNVGSSAETADAEMC 148
           Q  ++ +G     ADAE+ 
Sbjct: 130 QAGIELIGPDVPEADAEII 148


>gi|239831704|ref|ZP_04680033.1| prolyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239823971|gb|EEQ95539.1| prolyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 446

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/452 (12%), Positives = 121/452 (26%), Gaps = 61/452 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++ D IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 42  GIYAWLPIGLKVLNKVCDIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 100

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           QD   + +       ++   + R    ++  +      Y I   FR+E        +  +
Sbjct: 101 QDRQERDMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 158

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S     +          +  +             R  L  I            
Sbjct: 159 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFA---------RVGLQAI------------ 197

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               ++   G    D S +F   A     Q+    ++L +    
Sbjct: 198 -------------------PMRADTGPIGGDLSHEFIILAETGESQVFCDKAYLDL---- 234

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                   V G     +   +L  I +        ++ +   +   +             
Sbjct: 235 -------AVPGADTDFRNDAQLTDIVQRWTTPYAATDEMHDEADWAKVKPEDQVSARGIE 287

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +G       +     G+   G   DG        +       +  + +            
Sbjct: 288 VGHIFHFGTKYSEPMGAKVQGP--DGKEHLVSMGSYGIGPSRLVAAAIEAFHDDAGIIWP 345

Query: 371 NIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                    I  M   D    +  +   + L  AG+   +     +  G +    D    
Sbjct: 346 KAIAPFGAGIVNMKPGDEGCDAVSEKLYEALTNAGVDPLLDDTDDR-PGAKFATMDLIGL 404

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           P  +I G    + G ++IKD   G+  +  ++
Sbjct: 405 PTQVIVGPRGVAAGEVEIKDRKTGERQNLSVE 436


>gi|158423310|ref|YP_001524602.1| prolyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172047938|sp|A8I438|SYP_AZOC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|158330199|dbj|BAF87684.1| prolyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 440

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 54/461 (11%), Positives = 119/461 (25%), Gaps = 63/461 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ N+I + IR      G   +  P ++ +D L +     D   K +  +
Sbjct: 38  GIYAWLPLGLRVLNKICNIIREEQNRTGAVELLMPTIQSAD-LWRESGRYDDYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-PVFRNEKHGPGRFRQFI 129
           +D   + +       ++   + R   +++ ++       +         + G  R R+F+
Sbjct: 97  KDRHERDMLFGPTNEEMITEIVRGSIKSYKSLPLNLYHIQWKFRDEVRPRFGVYRSREFL 156

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
             D  +    AE A      M    L             + +   + G L    +     
Sbjct: 157 MKDAYSFDLDAEGAKHSYNKMFVAYLRTFARMGLKAIPMVADTGPIGGNLSHEFI----- 211

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                        L   G   V         D        A++  +    +   ++    
Sbjct: 212 ------------ILASTGESEV-----FCHGDYLEMAPPPADVNFDDAAAIQQVVNDWTT 254

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                  +    T A      ++                        RG+E      +  
Sbjct: 255 LYAATEEKHDAATFAAIPAERQMA----------------------ARGIEVGHIFYFGT 292

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
               P   +   P            DG        +       +  + +  +        
Sbjct: 293 KYSAPFNAKVLGP------------DGAEHLIHMGSYGIGPSRLVAAMIEASHDDAGIIW 340

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +      V I  +     ++          L  AG+   ++  + +  G++   AD   
Sbjct: 341 PDAVAPFQVGILNLKVGDSAVDAACADLYAKLTAAGVDV-LYDDTDERAGSKFATADLIG 399

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            P  I+ G    + G +++K    G              + 
Sbjct: 400 LPWQILVGPKSLADGKVELKRRVDGSRELVTPAEAFERLKG 440


>gi|306843758|ref|ZP_07476357.1| prolyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275949|gb|EFM57662.1| prolyl-tRNA synthetase [Brucella sp. BO1]
          Length = 442

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 124/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLNLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 339 VWPKAIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 432


>gi|254713929|ref|ZP_05175740.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717013|ref|ZP_05178824.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261218820|ref|ZP_05933101.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261321681|ref|ZP_05960878.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|260923909|gb|EEX90477.1| prolyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294371|gb|EEX97867.1| prolyl-tRNA synthetase [Brucella ceti M644/93/1]
          Length = 442

 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 124/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCAIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 339 IWPKAIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 432


>gi|225627317|ref|ZP_03785354.1| prolyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225617322|gb|EEH14367.1| prolyl-tRNA synthetase [Brucella ceti str. Cudo]
          Length = 445

 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 124/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 41  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 99

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 100 QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 157

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 158 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 217

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 218 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 250

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 251 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 293

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 294 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 341

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 342 IWPKAIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 400

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 401 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 435


>gi|116251485|ref|YP_767323.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|114152239|sp|Q1MIJ6|SYP_RHIL3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115256133|emb|CAK07214.1| putative prolyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 440

 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 60/448 (13%), Positives = 121/448 (27%), Gaps = 53/448 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR+     G   +  P L+ ++ L +     D   K +  +
Sbjct: 38  GIYSWLPLGKRVLDKVNAIIRDEQNRAGAIELSMPTLQSAE-LWQESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D        R  L                                       + +    
Sbjct: 97  KDRQD-----RPML---------------------------------YGPTNEEMVTDIF 118

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            +   S +     +  +     + +  +           K                    
Sbjct: 119 RSSVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREAAEHSYNKMF 178

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              LR  D+L    +  ++   G      S +F   A+    ++     F+  D+    H
Sbjct: 179 AAYLRTFDRLGLRAI-PMRADTGPIGGKLSHEFIILADTGESEVFCHKDFVDFDVPGE-H 236

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
             ++ V+G  A    +  L   +  +      +   +      RG+E      +      
Sbjct: 237 TDFDSVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKYSE 296

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P+  + Q P         G Y         + VPA   +      I+          ++ 
Sbjct: 297 PMGAKVQGPDGKEHFVHMGSY----GIGPTRLVPAIIEASHDDNGII-------WPASVA 345

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I     D       ++    L  AG          +  G +   AD    P+ I
Sbjct: 346 PFDIVVINMKAGDQACDDTCELIYAALSKAGKDVLYDDTDDRA-GTKFATADLIGVPVQI 404

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           I G    + G +++KD   G   +  I+
Sbjct: 405 IAGPRAVANGEVEVKDRKTGARETMTIE 432


>gi|294852177|ref|ZP_06792850.1| prolyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294820766|gb|EFG37765.1| prolyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 435

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 124/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 31  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 89

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 90  QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 147

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 148 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 207

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 208 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 240

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 241 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 283

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 284 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 331

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 332 IWPKAIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 390

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 391 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 425


>gi|196228822|ref|ZP_03127688.1| Anticodon-binding domain protein [Chthoniobacter flavus Ellin428]
 gi|196227103|gb|EDY21607.1| Anticodon-binding domain protein [Chthoniobacter flavus Ellin428]
          Length = 187

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 19/183 (10%)

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--QNV 346
           I I   IVRGL YYTG V+E                  ++ GGGRYD L+S       ++
Sbjct: 14  IDIDYAIVRGLAYYTGVVFEVFDRSKNE---------RALAGGGRYDKLLSLMSDGKVDL 64

Query: 347 PATGFSIGISRLIVALK----SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
           PA GF +G   L   +     +       +K+     I  +    +  S      Q LR 
Sbjct: 65  PALGFGMGDVVLANLIDDVPAAAAQRDAWLKQERACDIYVVVAKEERRSDALALVQQLRD 124

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AG R +  L ++K  G Q + A+      A++ G  E     +++K LA  +E+   I  
Sbjct: 125 AGQRVDFPLTAAK-VGKQFQTAELLGATRAVLVG-DEWP--QVKVKTLATREEILVPIGE 180

Query: 463 NES 465
            ++
Sbjct: 181 IKT 183


>gi|226952662|ref|ZP_03823126.1| ATP phosphoribosyltransferase [Acinetobacter sp. ATCC 27244]
 gi|226836599|gb|EEH68982.1| ATP phosphoribosyltransferase [Acinetobacter sp. ATCC 27244]
          Length = 388

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 80/405 (19%), Positives = 145/405 (35%), Gaps = 50/405 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++   +     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVVETLRREALDFLAVRGYQLVYTPFIEYIESLSSLSESNQDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   I    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGVRADMTPQVARIDA-HVRPIEGVARYCYAGTVLHTKPQNFNSTRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   L+  G      H+ + +  +   ++++ GL+ + +
Sbjct: 128 QLGAELYGHDSIEADVEMIDVMLALLKHTGRLEG-VHLDLGHVGLFRSLVKRAGLNKNTE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    +    G         +  +D + S LS D+ 
Sbjct: 187 SELSDLYQR----------KALPELEEFTKDLAMGADFYALGRYASDLDALESHLSQDIL 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K               +  F+ L      ++   + +  I I    +R   Y+TG +Y  
Sbjct: 237 KD-----------EDFKNAFDALKSTFAQIQSR-WPNLNIGIDVIELRSYHYHTGLMYAI 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  +  PATGFS         L +L ++ 
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSCD-------LYALGATQ 326

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               E    ++    +D D L+         R+ G+R    LG+ 
Sbjct: 327 FVDIE---TVVAPKGNDQDLLNAIVAA----RSQGLRVVQLLGND 364


>gi|332983243|ref|YP_004464684.1| prolyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332700921|gb|AEE97862.1| prolyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 569

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 69/564 (12%), Positives = 154/564 (27%), Gaps = 98/564 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G  +      R+  ++ + +R   +  G   I    L  ++ L K  
Sbjct: 26  MLRAGLMR-KLASGIYNYLPLGKRVLKKVEEIVREEMDKTGAQEILASALLPAE-LWKET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D     +F L+D + +   L     ++   + R   +++  +      Y+I   +R+
Sbjct: 84  GRWDVFGPEMFKLKDRNEREFCLGPTHEEIFTDIVRNEIKSYKQLP--FNLYQIQTKYRD 141

Query: 118 E--------KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
           E        +      +     D D  G                    +     D   G 
Sbjct: 142 EKRPRFGVMRSREFIMKDAYSFDKDWDGLDISYKKMYDAYCAIFDRCDLKYWVVDADTGA 201

Query: 170 NNRKILDGILEK-----IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
              K  +  +         +   D+      + +A         +  +  + +  T +  
Sbjct: 202 MGGKDSNEFMVSSDVGEAEVAYCDECGYAANIEKAPCVNRPIHAEEAEKEIKKVATPDVK 261

Query: 225 DFTKGANLTSEQIDIMVS-------------FLSIDLEKSMHELYELVKGTIAGEKGFNE 271
              +  +  +   D  V               L  D E ++ +L  L K +       N 
Sbjct: 262 TVDELMHFFNTTADRFVKTLIYAIDDKAVAVMLRGDREVNITKLQNLFKASAIEMADRNT 321

Query: 272 LVV-----------------------ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +                             ++     +N        V     +   V  
Sbjct: 322 VENVTGAEVGFAGPININVDALVVDDEVAHMKNFIIGANETGYHYENVNYGRDFKADVVA 381

Query: 309 AILGFPVMNEKQKPVVFGSVGGG------------------GRYDGLVSRFKGQNVPATG 350
            I    V +   K     ++  G                    Y     + +   +   G
Sbjct: 382 DIRNIEVGDPCPKCGKPINIARGIEVGHIFKLGTKYTEALGATYLDENGQEQPIIMGCYG 441

Query: 351 FSIGISRLIVALKSLE----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
             I  +   +  +  +        ++     +++   ++  + +   +     L + GI 
Sbjct: 442 IGINRTVAAIIEQHHDDRGIIWPMSVTPYHVIIVVASNYQPEQIQAAEKIHYELVSRGIE 501

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +     +  G +   AD    P+ I  G    S GM++ K                  
Sbjct: 502 VLLDDRDERA-GVKFNDADLIGIPIRITVGKK-ISAGMVEFK------------------ 541

Query: 467 REARVAQITIPISELVSTVKKILQ 490
           R  +   I IP+S++V  V   ++
Sbjct: 542 RRDKADSIDIPVSDIVDKVIAEIK 565


>gi|309811262|ref|ZP_07705053.1| threonine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434802|gb|EFP58643.1| threonine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 665

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 55/481 (11%), Positives = 121/481 (25%), Gaps = 98/481 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I+  + D +R  +   GF  + TP +   D              G+F  
Sbjct: 277 GLPVFHPKGGIIKREMEDYVRRRHIEEGFSYVGTPHIAKEDLFYTS-GHLPYYADGMFPP 335

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D DGQ             R  A N              P+        GR  + +    
Sbjct: 336 LDVDGQNY-----------RLKAMN-------------CPMHNEIFRSRGRSYRELPLRF 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
              G+      + +   +           + Y         +  +L+ I     D     
Sbjct: 372 FEFGTVYRDEKSGVLSGLTRVRMITQDDSHSYVTPEQAPGEIKHLLDFILGLLRDFGM-- 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  D   +   + V     +        +     + S+        L  D   +  
Sbjct: 430 ------NDFYLELSTRDVDGDKKDKFIGTDEQWDIATKVLSDVALESGLELVPDPGGAAF 483

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
              ++            ++  I     +        + +    +         + +I  F
Sbjct: 484 YGPKISVQARDAIGRTWQMSTIQYDFNQPARFGLEYQAADGSRQQPVMVHSAKFGSIERF 543

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +  +     F +                                              
Sbjct: 544 LGVLVEHYAGAFPAWLA------------------------------------------- 560

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
              PV +  +    +     Q     LR AG+R E+ +   + F  +++ A +   P  +
Sbjct: 561 ---PVQVLAVPVAEEYYDYLQDVAMKLREAGVRVEVDMSDDR-FPKKIRNASKSKAPFIL 616

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +R  G +  +    G + +                  +P+++ ++ + +++ E +
Sbjct: 617 IAGEEDRDNGAVSFR-FRDGSQKNG-----------------VPVADAIAEITRVITERQ 658

Query: 494 E 494
            
Sbjct: 659 N 659


>gi|325142059|gb|EGC64487.1| hypothetical protein NMB9615945_1349 [Neisseria meningitidis
           961-5945]
 gi|325198030|gb|ADY93486.1| conserved hypothetical protein [Neisseria meningitidis G2136]
          Length = 383

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 136/409 (33%), Gaps = 51/409 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLLNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L    
Sbjct: 123 LQAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK        VK    +G    +                         
Sbjct: 181 SATLLALM---QDKDTGAVEAQVKAWKLDGMWAKAFSLLPRL---------------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +    A     +EL  + +      +    I I  + +R   Y+TG +Y 
Sbjct: 223 REVLSDARGRLPDLSAVGGALDELQAVCD-----AFPDCEIHIDLSELRVDNYHTGLLYA 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E  
Sbjct: 278 AYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAIERQ 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         +  D++     +   + LR  G    +  G   N 
Sbjct: 327 P------------AVLVDAEDAEAAREAVEALREQGQCVVVDYGIGHNV 363


>gi|209548882|ref|YP_002280799.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226701324|sp|B5ZYN2|SYP_RHILW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|209534638|gb|ACI54573.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 440

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 58/448 (12%), Positives = 118/448 (26%), Gaps = 53/448 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR+     G   +  P L+ ++ L +     D   K +  +
Sbjct: 38  GIYSWLPLGKRVLDKVNAIIRDEQNRAGAIELSMPTLQSAE-LWQESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D        R  L                                       + +    
Sbjct: 97  KDRQD-----RPML---------------------------------YGPTNEEMVTDIF 118

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            +   S +     +  +     + +  +           K                    
Sbjct: 119 RSSVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMF 178

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              LR  D+L    +  ++   G    + S +F   A+    ++     F+  D+     
Sbjct: 179 AAYLRTFDRLGLRAI-PMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGFDIPDD-R 236

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
             ++ V G  A    +  L   +  +      +   +      RG+E      +      
Sbjct: 237 TDFDSVDGLKAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKYSE 296

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  + Q P         G Y         + VPA   +      I+          ++ 
Sbjct: 297 AMGAKVQGPDGKEHFVHMGSY----GIGPTRLVPAIIEASHDDNGII-------WPASVA 345

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I     D       ++    L  AG          +  G +   AD    P  I
Sbjct: 346 PFDIVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRA-GTKFATADLIGVPFQI 404

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           I G    + G +++KD   G   +  I+
Sbjct: 405 IAGPRAVANGEVEVKDRKTGARETMTIE 432


>gi|121712796|ref|XP_001274009.1| protein kinase (Gcn2), putative [Aspergillus clavatus NRRL 1]
 gi|119402162|gb|EAW12583.1| protein kinase (Gcn2), putative [Aspergillus clavatus NRRL 1]
          Length = 1593

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 75/492 (15%), Positives = 144/492 (29%), Gaps = 59/492 (11%)

Query: 10   ELPRGFADCP--------TK--EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            + P+ F D              E+ ++  + + +  I+  +G        +E +  +   
Sbjct: 974  QSPKKFEDIAWDMESRAAPAANELLVQGLVKERLTAIFRRHG-------AVETTRQML-- 1024

Query: 60   LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             P       G   L D  G  + L +DLT P AR +                      E 
Sbjct: 1025 FPRSQHYRSGAVRLLDSSGNLLQLPFDLTLPNARSI----PRQDPSLEKTYAFGTVYREM 1080

Query: 120  HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
               G  R   + D D V  +A     ++ +  A+ ++ +     ++         L    
Sbjct: 1081 PHGGEPRTHKEVDFDIVSRNAL----DLALKEAEVIKVLDEIIEEF-------PPLRSSP 1129

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                ++  D L   +   R          + +  L     +         +         
Sbjct: 1130 MSFLINHSDLLQLIMDFCRITPSQVPLVKEVISKLNFGKWSMQKIRSELRSPSIGVASTS 1189

Query: 240  MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRG 298
            +      D   +  + ++ +K  + G      L  I   +           +     V  
Sbjct: 1190 LDDLARFDFRDTPKQAHKRLKAIMEGTAFAERLAPIFARINLLVTYLQGFDVKRKVYVNP 1249

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFS 352
            L       ++  + F  +   ++P VF     GGRYD LV  F            A GF+
Sbjct: 1250 LGSLNDKFFKGSILFQCVFNTKRPDVF---AAGGRYDKLVQEFCPKVLTGRPQTHAVGFN 1306

Query: 353  IGISRLIVALKSL------------ESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQM 399
            +   RL  A+               ES      +     +     D+  L        Q 
Sbjct: 1307 LSWDRLSSAMLDYLKGTTKASIKGSESDAGAFWKTRRCDVLVASFDATVLRTMGIKLVQD 1366

Query: 400  LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            L ++ I +E+ + +S +    L      N    +I     + RG  +++ L   +EL   
Sbjct: 1367 LWSSDISSELAVDAS-SLEELLSKYKDHNHSWIVIAKQDSKERG-FKVRCLVPKEELDIR 1424

Query: 460  IKNNESWREARV 471
                  W    +
Sbjct: 1425 SSELIPWLRNEI 1436


>gi|163843095|ref|YP_001627499.1| prolyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|254706964|ref|ZP_05168792.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254709928|ref|ZP_05171739.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|256031421|ref|ZP_05445035.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256159542|ref|ZP_05457310.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254829|ref|ZP_05460365.1| prolyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260168555|ref|ZP_05755366.1| prolyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261222010|ref|ZP_05936291.1| prolyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314427|ref|ZP_05953624.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317474|ref|ZP_05956671.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261758028|ref|ZP_06001737.1| prolyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988510|ref|ZP_06101067.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265997974|ref|ZP_06110531.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|189083490|sp|B0CLE9|SYP_BRUSI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163673818|gb|ABY37929.1| prolyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|260920594|gb|EEX87247.1| prolyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261296697|gb|EEY00194.1| prolyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303453|gb|EEY06950.1| prolyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738012|gb|EEY26008.1| prolyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262552442|gb|EEZ08432.1| prolyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660707|gb|EEZ30968.1| prolyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 442

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 124/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 339 IWPKAIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 432


>gi|302674591|ref|XP_003026980.1| hypothetical protein SCHCODRAFT_258760 [Schizophyllum commune H4-8]
 gi|300100665|gb|EFI92077.1| hypothetical protein SCHCODRAFT_258760 [Schizophyllum commune H4-8]
          Length = 1648

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 64/490 (13%), Positives = 136/490 (27%), Gaps = 71/490 (14%)

Query: 21   KEIRIRNRI-LDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
             +    N I  + +  ++  +G    E PLL     + +   D+        +  D  G 
Sbjct: 1062 PDHAALNYIAEERLSAVFRLHGAIDTEPPLL-----MTETSADDSHA-----TFLDRFGD 1111

Query: 80   WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
             + L  DL  P AR  A      +                               N  + 
Sbjct: 1112 VVMLPADLLVPFARLAARKSSNRIKRYHIG--------------------DIYKSNGIAG 1151

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
                       +     ++G       +      ILD        + +  +    I+  A
Sbjct: 1152 HPKYSKAAVFDIISKDLSLGPVAAGVEMLSVASSILDSFPNVSQAY-EIHITHSEIIDCA 1210

Query: 200  IDKLDKFGLQGVKLLLGEGRT--DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
             D++ +     V+ +L + R+             ++S  I  +   +  D E  + E   
Sbjct: 1211 FDRVPQELRASVRDILLQHRSSTPQKRSALAKKGISSSVIQELDLLV--DPEADIDEWIS 1268

Query: 258  LVKG-----TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             ++        +     +E+    +    +G     +     + +         +E  + 
Sbjct: 1269 KLEKTSPFLLGSIRSALDEVKNTLQFAAATGIKRPILFRPLMLNQFAR-----TFEGGVV 1323

Query: 313  FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-----NVPATGFSIGISRLIVALKS--- 364
              V+   ++      +   GRYD L+S+F         + A G  + + R+  AL     
Sbjct: 1324 IQVVRRNKR---QDVLAMAGRYDHLISQFTPPNVESEPLCAYGMQVFVDRITTALVDYQI 1380

Query: 365  -------LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN- 416
                    E  +          +  +      L         L    I A++   +    
Sbjct: 1381 SSVKTLVKEQRSFGFWSPRRCDVYVVSFHPGYLQDRLDIVADLWNNNISADLMYDAGLPT 1440

Query: 417  --FGNQLKYADRRNCPLAIIQGTGERSRGM--LQIKDLAKGKELSREIKNNESWREARVA 472
              + +      R      +        R    L++K L +G E          W + ++A
Sbjct: 1441 YEYESAFDVCAREGILFTVYPRPRGGKRDQLVLKVKSLLRGTEYELSRSELVPWLQQQIA 1500

Query: 473  QITIPISELV 482
            +      +L 
Sbjct: 1501 EQ--KRVDLA 1508


>gi|254718929|ref|ZP_05180740.1| prolyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265983916|ref|ZP_06096651.1| prolyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838840|ref|ZP_07471671.1| prolyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662508|gb|EEZ32769.1| prolyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406124|gb|EFM62372.1| prolyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 442

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 124/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 339 VWPKAIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 432


>gi|255022906|ref|ZP_05294892.1| ATP phosphoribosyltransferase regulatory subunit [Listeria
           monocytogenes FSL J1-208]
          Length = 365

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 138/398 (34%), Gaps = 55/398 (13%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVA 96
           +E  GF  IETP++E+ D        E + +  ++   D+ G+   LR D+T P+ R V+
Sbjct: 5   FEKRGFKRIETPVIEFEDVFS----SEHQADAKLYRFFDEKGRLTVLRPDMTLPIGRVVS 60

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
               T+    +    G +FR  +   G   +  Q  ++ +G  +  A+ E  +     L 
Sbjct: 61  TTGVTLP--LKLSYSGKIFRANEDFGGEQNEQTQAGIEIIGYPSIKAEIECILSGIGVLN 118

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
           A+  +  ++ I + +  I   +++ + L    ++                     +LL+ 
Sbjct: 119 AL--EIPNFQIELGHAAIYRRVIQLLNLSETAEI-------------------DFRLLIQ 157

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK-SMHELYELVKGTIAGEKGFNELVVI 275
                    F  G   T +  D +++   +     ++    + +          +E+  I
Sbjct: 158 NKSLTGIKRFVAGNPSTLD--DFILAIPRLFGPATAILNQAKNLTTDKGILTALHEMETI 215

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
            E V      +  I +   +V+   YYTG ++         N             GGRYD
Sbjct: 216 VEAVS----YTADISVDLGLVQDFHYYTGIIFRGYADLAADN----------FLSGGRYD 261

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            L+ +F   + PA G ++ +  L                   +             +   
Sbjct: 262 HLLEQFTSSSSPAVGLALNLDSLTTLQNRAGIIKKQTPTTLLIHYEL---------EALQ 312

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
             +        +E+    + +  N + +A + + P  +
Sbjct: 313 QAEKFMQETPNSELSFFETAS--NAISFAKKWHIPEVV 348


>gi|148664766|gb|EDK97182.1| histidyl-tRNA synthetase-like, isoform CRA_c [Mus musculus]
          Length = 125

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     ++P+G  D   +++ +R +ILD I + ++ +G   ++TP  E  + L +   D 
Sbjct: 51  KPNFVIKVPKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDN 110

Query: 64  DRPNKGVFSLQDDD 77
                 ++ L+D  
Sbjct: 111 FGL---MYDLKDQG 121


>gi|149017269|gb|EDL76320.1| rCG49571, isoform CRA_a [Rattus norvegicus]
          Length = 127

 Score = 80.7 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K     ++P+G  D   +++ +R +ILD I + ++ +G   ++TP  E  + L +   D 
Sbjct: 53  KPNFIIKVPKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDN 112

Query: 64  DRPNKGVFSLQDDD 77
                 ++ L+D  
Sbjct: 113 FGL---MYDLEDQG 123


>gi|254689076|ref|ZP_05152330.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254693559|ref|ZP_05155387.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|256257325|ref|ZP_05462861.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260754574|ref|ZP_05866922.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260883601|ref|ZP_05895215.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261213824|ref|ZP_05928105.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|297248174|ref|ZP_06931892.1| prolyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260674682|gb|EEX61503.1| prolyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873129|gb|EEX80198.1| prolyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260915431|gb|EEX82292.1| prolyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|297175343|gb|EFH34690.1| prolyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 442

 Score = 80.7 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 124/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQKREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 339 IWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 432


>gi|154249367|ref|YP_001410192.1| prolyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769336|sp|A7HKV2|SYP_FERNB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154153303|gb|ABS60535.1| prolyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 574

 Score = 80.7 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 62/543 (11%), Positives = 142/543 (26%), Gaps = 88/543 (16%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+  +I   +R   +N G + I  P+++ ++ L K     +     
Sbjct: 34  KIAAGVYTYLPLGRRVLLKIEKIVREEMDNIGANEILMPIIQPAE-LWKQSGRWEDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D  G+  +L     +L      ++ +N                 +       RF 
Sbjct: 93  MMKLKDRHGRDFTLGPTHEEL----VTFLVQNELNSYKQLPITLYQMANKYRDEIRPRFG 148

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEA----------------------VGIKRND 164
                +       +  +D E                                 +G   + 
Sbjct: 149 VLRAREFIMKDGYSFHSDWESLDETYKAHRKAYSNIMERIGLKYAVVEASSGAIGGNESH 208

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI----------------------DK 202
             +   +    + +  + G  G+D+       +                         D 
Sbjct: 209 EFVAFADTGESNVLFCECGYAGNDERVPYTGEIIYDNEELKGMEKVYTPNVKTAQDVADF 268

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
           L     + VK L+ +GR         G    +E  + + +FL+ D   +     +++K  
Sbjct: 269 LGVPVRKIVKTLIYKGRNGYFMALVPGDRELNE--EKLKNFLN-DQSLAFATPDDILKDF 325

Query: 263 IA------------GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                          +   + LV   +     G   +   ++  + R  +          
Sbjct: 326 GVPIGFLGPVGVKGIKVIADHLVKGMKNFVVGGMEKDYHFVNVNVDRDFKVDELADLIVT 385

Query: 311 ------------LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
                       L      E       G+          + +         G        
Sbjct: 386 REGDPCPVCGKPLNAKKGIELGHIFKLGTKYSEAMGSKYMDKDGQLKPFIMGCYGWGVSR 445

Query: 359 IV------ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
            +                       V+IT + ++ + +   +     L   G    +   
Sbjct: 446 TLGAIVEQLHDEKGIIWPLSVAPFAVVITPVSNNENLMKFSEELYNFLVEKGEEVLLD-D 504

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + + G +   AD    P  +  G    S GM++IK    G++   +    E +   + +
Sbjct: 505 RNISPGMKFNDADLIGIPFRVTVGKA-LSEGMVEIKW-RTGQQFKVKATLEEIYEFLQKS 562

Query: 473 QIT 475
           +  
Sbjct: 563 KQE 565


>gi|82523942|emb|CAI78664.1| prolyl-tRNA synthetase [uncultured delta proteobacterium]
          Length = 574

 Score = 80.7 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 60/558 (10%), Positives = 145/558 (25%), Gaps = 93/558 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+++ S+ L +        
Sbjct: 31  MIRKLTSGIYSYLPLGYRVIRKVEQIVREEMNKAGAQEVFMPMVQPSE-LWEESGRWVHY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
            K +   +D   +         ++   L R   + +  +       +             
Sbjct: 90  GKELLRFRDRHDRPYCFGPTHEEVITDLVRNDVKTYRQLPLNLYQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI- 178
                F        D   + A+ +  +M     +     G++         +        
Sbjct: 150 MRCREFGMKDAYSFDADEAGAQNSYEKMFTAYNNIFRRCGLRFRPVEADSGSIGGKYSHE 209

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
              +   G+D +        A +       Q  K  + E       +       T E++ 
Sbjct: 210 FMVMADSGEDAMVFCEKCSYAANLEKAEIAQPAKKNIAEKDLLPLENIHTPNVRTIEEVS 269

Query: 239 IMVSFLSIDLEKSMHELYE------LVKGTIAGEK-------GFNELVVISELVRKSGYN 285
           + +   + ++ K++    +      L++G     +       G   L +  + + K    
Sbjct: 270 VFLKVKAQNIVKTLIFNADGQPCAVLIRGDQEVNEIKVKNYLGAALLELADDEMIKKATG 329

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP---VVFGSVGGGGRYDGLVSRFK 342
           + R    +  ++        +   I      N++      V  G       Y  L    +
Sbjct: 330 APRGFAGAVNIKTKVIADYSIMNMINFVTGANKQDYHLKNVNAGRDFQVEAYTDLRVVEE 389

Query: 343 GQNVPAT-------------------------------------------GFSIGISRLI 359
             + P                                              + IGI R +
Sbjct: 390 NDSCPRCAGKIKFARGIEVGHVFKLGTKYSKAMKAVYLDKDGQEKVMIMGCYGIGIGRTV 449

Query: 360 VALKSLESSTN---NIKEMGPVLITTMD---HDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
            A                + P  +       +D       +     ++   I   +    
Sbjct: 450 AACIEQNYDDQGIVWPVPLAPYHVIITPVNVNDKSISDVAENLYNKMQDKKIEVILDDRD 509

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +  G +   AD    PL ++ G    ++  +++K    G+                   
Sbjct: 510 ERA-GVKFNDADLIGIPLRVVIGQKNLAQNKVELKIRKTGE------------------N 550

Query: 474 ITIPISELVSTVKKILQE 491
             I + E+V+ VK+ + +
Sbjct: 551 KLIAVDEIVNEVKEFVNK 568


>gi|125624119|ref|YP_001032602.1| ATP phosphoribosyltransferase regulatory subunit [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|166219832|sp|A2RKS4|HISZ_LACLM RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|124492927|emb|CAL97890.1| HisZ protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070893|gb|ADJ60293.1| ATP phosphoribosyltransferase regulatory subunit [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 318

 Score = 80.7 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 112/310 (36%), Gaps = 41/310 (13%)

Query: 15  FADCPTKEI--------RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
                 +E             +I   +RN++E+  +  +  P  EY +       D    
Sbjct: 4   MNYLLPEESGEMTLSGITTLRKIEQKLRNLFESQNYQEVMPPNFEYVELYT--GLDAGFE 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F   + +G+ I+LRYD T PLAR  A    + +   R    G VFR EK   GR  
Sbjct: 62  QEKMFQFINHEGKSIALRYDFTVPLARNFA---LSELTEARYSYFGKVFRKEKRHKGRRT 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q   + +G S  T D E+  +   +LEA+ +K     IG           +++    
Sbjct: 119 ESYQVGTELLGLSEVTGDQEILGLTFMSLEALTLKNTIVEIGSA------AFYKRLCELS 172

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                         + L+K  L G+K  + +     +      A +T+  +  M   +  
Sbjct: 173 GGDAQLFS------ELLEKKSLSGMKAFVDKHEMIGAPRDLLLALMTTTDLPTMKKLVLA 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             ++ + +  E+++     +K                    +I     +V  + YYTG +
Sbjct: 227 TGDEKLSQALEMLEALNLPDK----------------TAICQIHYDFAMVPAMGYYTGLM 270

Query: 307 YEAILGFPVM 316
           ++  +     
Sbjct: 271 FQVYVEGVAQ 280


>gi|149909734|ref|ZP_01898386.1| prolyl-tRNA synthetase [Moritella sp. PE36]
 gi|149807248|gb|EDM67203.1| prolyl-tRNA synthetase [Moritella sp. PE36]
          Length = 573

 Score = 80.7 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 56/564 (9%), Positives = 130/564 (23%), Gaps = 101/564 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++ + +R   +  G      P+++ +D L +     D+ 
Sbjct: 31  MVRRLASGLYTWLPTGLRVLRKVENIVREEMDKAGAVETLMPMVQPAD-LWQETGRIDKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRI------GPVFRN 117
              +  + D   +   L     ++   +AR    ++  +       +        P F  
Sbjct: 90  GPELLRINDRHNRSFVLGPTHEEVITDIARKEINSYKQLPLTLYQIQTKFRDEVRPRFGV 149

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA-----------------------DT 154
            +      +      + +   +                                      
Sbjct: 150 MRSREFLMKDAYSFHISDECLNDTYNKMHTAYCNIFERIGLEYRPVLADTGSIGGAVSHE 209

Query: 155 LEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL 214
              +     D  +  +       I +   L    +       L  +D  D   ++ V   
Sbjct: 210 FHVLAESGEDDIVFSDGSDYAANIEKAEALAPAGERPAATQTLTVVDTPDAHSIEDVCKC 269

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK-GFNELV 273
           L    T         A     Q   +++ +            E + G  +       E +
Sbjct: 270 LDVDATQTVKTLLVAAEAEEGQPQGVIALVVRGDHVLNEVKAEKIAGVASPLTFANEEQI 329

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG---- 329
             +            +     + R   +    V  A +    +                 
Sbjct: 330 QAAANCDAGSIGPKGLNCPVIVDRSAAHLADFVCGANVNGQHITGANWDRDITEYTVADI 389

Query: 330 ----------GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
                      G     +    +  ++   G     +     L               + 
Sbjct: 390 RNVVEGEASPCGKGTLSIKRGIEVGHIFQLGTQYAEAMKAGVLNMQGKQQIMTMGCYGIG 449

Query: 380 I--------------------------------TTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +                                  M   +D     +     L+ AGI  
Sbjct: 450 VSRIVAAAIEQNHDENGIIWNESIAPYKVSIIPMNMHKSADVKEAAEKIYADLQAAGI-- 507

Query: 408 EMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           E+F    K   G     ++    P  II G      G+++ K    G +           
Sbjct: 508 EVFFDDRKERPGVMFADSELIGIPHNIIIGDRSLKNGLVEHKLRLTGDKT---------- 557

Query: 467 REARVAQITIPISELVSTVKKILQ 490
                    + ++++V+ VK +L 
Sbjct: 558 --------EVAVADIVAHVKSLLA 573


>gi|255585505|ref|XP_002533444.1| eif2alpha kinase, putative [Ricinus communis]
 gi|223526706|gb|EEF28940.1| eif2alpha kinase, putative [Ricinus communis]
          Length = 1162

 Score = 80.3 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/416 (12%), Positives = 129/416 (31%), Gaps = 48/416 (11%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIET-PLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
            +  +R+ ++++ R +++ +    +E  P+        + L D  + ++    L    G  
Sbjct: 768  DTELRDYVVEAAREMFKRHCAKHLEIIPV--------RLLDDCPQFSRKTVKLLTHGGDL 819

Query: 81   ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            + L ++L  P   ++  N                      G     +++Q D D +G ++
Sbjct: 820  LELCHELRLPFVSWLIANQKFSFK----RYEVSSVYRRAIGHSPPNRYLQGDFDIIGGAS 875

Query: 141  ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
               +AE+  +  D +       +   I +N+  +LD I   +G+  +    +   +L  +
Sbjct: 876  ALTEAEVIKVTMDIVTRF-FLSDSCDIHLNHGDLLDAIWSWVGIKPE-HRQKVAELLSMM 933

Query: 201  DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
              L     +  +                 A     ++  +       +++++  L   + 
Sbjct: 934  GSLRPQSSE--RKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAVDQALPRLRGALP 991

Query: 261  GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                  K  +EL  +   ++      + + I++ +     Y+ G  ++ +  F  + +  
Sbjct: 992  ADSPTRKALDELSDLVIYLKVWKI-EHHVYINALMPPTENYHRGLFFQFLYPF--VQKTH 1048

Query: 321  KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
             P   G+                                  ++         +      I
Sbjct: 1049 PPGAVGTSLALET---------------------------IIQHSPVDFRPTRNETSTNI 1081

Query: 381  TTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
                      L +       L  A I+AE    S  +   Q +YA   +    +I 
Sbjct: 1082 LVCSRGGGGLLVERMGLVAELWEANIKAEFVPISDPSLTEQYEYASEHDIRCLVII 1137


>gi|118594966|ref|ZP_01552313.1| ATP phosphoribosyltransferase regulatory subunit [Methylophilales
           bacterium HTCC2181]
 gi|118440744|gb|EAV47371.1| ATP phosphoribosyltransferase regulatory subunit [Methylophilales
           bacterium HTCC2181]
          Length = 319

 Score = 80.3 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 64/331 (19%), Positives = 125/331 (37%), Gaps = 39/331 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            LP    D    +         ++ +++ + G+  I   LLEY +SL     D D     
Sbjct: 5   RLPNNLEDLLPSKAIKLETFRRALIDLFASNGYQYIMPSLLEYEESLKAHGKDLDI---D 61

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            + + D   G+ + +  DLT   +R  A          +    GPV R  K   G  R+ 
Sbjct: 62  TYKVVDQLSGRMMGISSDLTTQASRVDAYLMQGAEKESKLCYAGPVLR-TKSKNGHSREL 120

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++  GS+A  AD E+  ++ ++L+ +GIK  +  I +N+  I   I++ I L+  +
Sbjct: 121 FQVGLEYFGSAAPAADLEVLTILINSLQLLGIK--EITIDLNDLSIFQSIIQHINLNAQE 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           K                     +   +      ++          ++  D +++  ++  
Sbjct: 179 K-------------------DDLLQAMILKDKSSASSLLIQLG-NNKHADQLLALFNLYG 218

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           + S+  + EL     +     N +  + ELV        ++    + + G +Y++G V+ 
Sbjct: 219 DSSV--IKELSALDPSNRVLMNAIKKLDELVLALTNVGAKVTFDFSDITGYQYHSGLVFS 276

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
           A                 ++  GGRYD L  
Sbjct: 277 AYT----------DGFTAAIAHGGRYDNLNE 297


>gi|15965039|ref|NP_385392.1| prolyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307301111|ref|ZP_07580880.1| prolyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307317844|ref|ZP_07597282.1| prolyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|81854328|sp|Q92QN2|SYP_RHIME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15074218|emb|CAC45865.1| Probable prolyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306896606|gb|EFN27354.1| prolyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306904066|gb|EFN34652.1| prolyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 442

 Score = 80.3 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/452 (10%), Positives = 112/452 (24%), Gaps = 61/452 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR      G   +  P L+ ++ L +     D   K +  +
Sbjct: 38  GIYTWLPLGKRVLDKVNAIIREEQNRSGAIELLMPTLQSAE-LWQESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D   + +       ++   + R   +++  +                            
Sbjct: 97  KDRQDRPMLYGPTNEEMITDIFRSYVKSYRNLPL-------------------------- 130

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                           +  +     + +  +           K                 
Sbjct: 131 ---------------NLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLDRAGAEHAYN 175

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                 LR  D++    +  ++   G    + S +F   A+    ++     FL  D   
Sbjct: 176 KMFAAYLRTFDRMGLRAI-PMRADTGPIGGNLSHEFIILADTGESEVFCHKDFLGFD--- 231

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                   + G          L  I +        ++ +   +      E          
Sbjct: 232 --------IPGEDTNFDDVAGLKTIFDKWTSRYAATSEMHDEAAFGAIAEGERLSARGIE 283

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +G       +     G+   G   DG        +       +  + +  +         
Sbjct: 284 VGHIFYFGTKYSEAMGAKVLGP--DGKEHTVHMGSYGIGPTRLVPAIIEASHDDNGIIWP 341

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                  V++  M    ++           L  AG    +     +  G     AD    
Sbjct: 342 KGIAPFDVVVINMKTGDEACDAACGKVYSDLGKAGFDVLLDDTDERAGGK-FATADLIGV 400

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           P+ +I G    + G +++KD   G   +  ++
Sbjct: 401 PVQVIVGPRSIANGEVEVKDRKTGARETMTVE 432


>gi|237815257|ref|ZP_04594255.1| prolyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|237790094|gb|EEP64304.1| prolyl-tRNA synthetase [Brucella abortus str. 2308 A]
          Length = 445

 Score = 80.3 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 67/455 (14%), Positives = 124/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 41  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 99

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 100 QDRQKREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 157

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 158 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 217

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 218 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 250

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 251 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 293

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 294 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 341

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 342 IWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 400

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  IK
Sbjct: 401 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIK 435


>gi|62289771|ref|YP_221564.1| prolyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699699|ref|YP_414273.1| prolyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024014|ref|YP_001934782.1| prolyl-tRNA synthetase [Brucella abortus S19]
 gi|254697210|ref|ZP_05159038.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260545481|ref|ZP_05821222.1| prolyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260761620|ref|ZP_05873963.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|81309431|sp|Q57DT1|SYP_BRUAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152174|sp|Q2YNE3|SYP_BRUA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699122|sp|B2S561|SYP_BRUA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|62195903|gb|AAX74203.1| ProS, prolyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615800|emb|CAJ10798.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase,
           class IIa:Anticodon binding domain:Prolyl-tRNA
           synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189019586|gb|ACD72308.1| prolyl-tRNA synthetase [Brucella abortus S19]
 gi|260096888|gb|EEW80763.1| prolyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260672052|gb|EEX58873.1| prolyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 442

 Score = 80.3 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 67/455 (14%), Positives = 124/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQKREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 339 IWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  IK
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIK 432


>gi|222151097|ref|YP_002560251.1| proline-tRNA ligase [Macrococcus caseolyticus JCSC5402]
 gi|254782906|sp|B9EBE4|SYP_MACCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222120220|dbj|BAH17555.1| proline-tRNA ligase [Macrococcus caseolyticus JCSC5402]
          Length = 568

 Score = 80.3 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 60/547 (10%), Positives = 138/547 (25%), Gaps = 82/547 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K  +  ++  G         R+ N+I   +R   E      I  P L+ S+ L       
Sbjct: 28  KAGMIKQVASGVYSYLPIAKRVLNKIESIVREEMEAIDGVEILMPALQPSE-LWSESGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFR 116
                 +  + D  G+  +L     ++   L R   +++  +          +R     R
Sbjct: 87  QSYGAELMRMTDRHGREFALGPTHEEIITSLVRDELKSYKKLPVTLFQIQNKFRDEKRPR 146

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
                   F            +S +    +M    +     + +    +   I +   + 
Sbjct: 147 FGLLRGREFIMKDAYSFHATEASLDETYQDMYNAYSKIFSRLNL---QFRPVIADSGAIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G      +   +   + +      D         V     +  T+ +           + 
Sbjct: 204 GSHTHEFMALAEIGEDTICYTDGSDYAANIEKAEVVYHPNKKHTEENVLEKVHTP-GVKT 262

Query: 237 IDIMVSFLSIDLEKSM-----------------------------------------HEL 255
              +  FL  DL++ +                                          ++
Sbjct: 263 AQQLADFLKRDLDEIVKSMIVKVDDQFVMFLIRGHHELNDIKVKSFFGTEHVEMATDDDI 322

Query: 256 YELVKGTIAGE--------KGFNELVVISELVRKSGYNSNRIKISSTIV-RGLEYYTGCV 306
             ++  +              + +  V        G N +     +  V R         
Sbjct: 323 RSILDASPGSLGPVGVNKIDIYADNSVQDLNNLAVGANEDDYHYVNANVDRDFNVKAYGD 382

Query: 307 YEAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +  IL      +   PV F            G +Y   ++     +       I     I
Sbjct: 383 FRFILEGEPAADGSGPVKFAEGIEIGQVFKLGTKYSESMNATFLNDQGRAEPMIMGCYGI 442

Query: 360 -------VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAE--- 408
                    ++        I               +   + Q      L     R +   
Sbjct: 443 GVSRTLSAVIEQHNDDKGIIWPTAITPYEVHIISVNPKQEVQKNLADQLYDT-YRTQYEV 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++   ++  G +   AD    P+ ++ G    + G++++K+   G  +   I N +   +
Sbjct: 502 LYDDRAERAGVKFNDADLIGIPVRVVVGKQ-AADGIVEVKNRRTGDAVEVHIDNLQETIQ 560

Query: 469 ARVAQIT 475
           +  A   
Sbjct: 561 SIYASFE 567


>gi|114799658|ref|YP_760468.1| prolyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123323241|sp|Q0C1C5|SYP_HYPNA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114739832|gb|ABI77957.1| prolyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 439

 Score = 80.3 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 55/460 (11%), Positives = 124/460 (26%), Gaps = 63/460 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  RI   +R      G   +  P L+ +D L +     D   K +  +
Sbjct: 38  GIYSWLPLGYRVLKRIEQIVREEMNRAGAIEMLMPTLQQAD-LWRESGRYDDYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D   + +       +L   + R   +++  +      Y     FR+E        +  +
Sbjct: 97  KDRHERDMLYGPTNEELITDVFRTYVKSYKQLP--LNLYHQQWKFRDEVRPRFGVMRGRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S                         +       RK+    L        D++
Sbjct: 155 FLMKDAYSFD---------------------LTEEDARAAYRKMFCAYLNAF-----DRM 188

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
               I +RA        L    ++L +             +L +  +D       +D E 
Sbjct: 189 GLTAIPMRADTGPIGGDLSHEFIILADTGESAVFCDKALLDLPAPGLD-------LDFES 241

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +        G  A  +  ++    + L      ++  I++                   
Sbjct: 242 DLTPFVTERTGYYAATEEMHDEAAFNALPEDRRVSARGIEVGH---------------IF 286

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                 ++    VV G        DG +   +  +       +  + +            
Sbjct: 287 FFGTKYSKPMNAVVQGP-------DGQMVPVQMGSYGIGVSRLLGAIIEACHDENGIVWP 339

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                  V +  M   +++           L  AG          +  G +    D    
Sbjct: 340 ESVAPFDVGLINMRPGNEACDAACNTLYAALTAAGREVLYDETDDRA-GAKFARMDLIGL 398

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           P     G    + G +++K+   G++   +I++  +  + 
Sbjct: 399 PWQTTVGPRGVTEGKVEVKNRKTGEKHDVKIEDMLAQLKG 438


>gi|57641105|ref|YP_183583.1| threonyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|73919819|sp|Q5JGC8|SYT_PYRKO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57159429|dbj|BAD85359.1| Threonyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 626

 Score = 80.3 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 20/204 (9%), Positives = 57/204 (27%), Gaps = 1/204 (0%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL  I            R                    A+    +  E  +         
Sbjct: 405 ELAKIIGKPVLIEMWDQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERFGIKYYDE 464

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
            G+    +      +         I      L+           + P+ +  +    + +
Sbjct: 465 EGKERTPLILHCSPSGAIERVMYAILEKQAKLQEKGIKPMYPLWLSPIQVRVIPVSDEVM 524

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                    L  A IR ++     +    +++ A++   P  I+ G  E+ +  + ++  
Sbjct: 525 DYALYVAGKLEGAKIRVDVDDTGDR-LNKKIRKAEKEWIPYIIVVGRNEKEQNTVTVRRR 583

Query: 451 AKGKELSREIKNNESWREARVAQI 474
           + G+++  ++++     + +    
Sbjct: 584 SDGRQVEMQLEDLIREIKGQTEGF 607


>gi|15605873|ref|NP_213250.1| prolyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|81816424|sp|O66690|SYP_AQUAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2983039|gb|AAC06648.1| proline-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 570

 Score = 80.3 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 62/533 (11%), Positives = 139/533 (26%), Gaps = 76/533 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +      ++  ++   IR   +  G   +   +L   + L +     +   + +F L
Sbjct: 38  GIYELLPPAYKVLKKVESIIRKEMDRSGAQELLLTVLNPKE-LWEETGRWETYGEELFKL 96

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +D +G+   L         DL   + R   +    +      +R     R        F 
Sbjct: 97  KDRNGREYCLGPTHEEEITDLVRRVVRSYRQLPVILYQIQVKFRDEKRPRFGLIRAREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR------------------------ 162
                  D    SA  +   M          + +                          
Sbjct: 157 MKDAYSFDTDDMSAMISYEAMKFAYQRIFNKLRLNVIMAEADVGQIGGKMSHEFIAFTDY 216

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN 222
            +  +            E + L   ++  E    +  +   +   ++ +   L    +  
Sbjct: 217 GEAKVAYCENCGYAANAEIVPLPKPEEEKEEEKPMEKVHTPNVHTIEELSKFLDVHPSKI 276

Query: 223 SGDFTKGANLTSEQIDIMVSFLSID----------------LEKSMHELYELVKGTIAGE 266
                   N     + ++     ID                 ++ + EL    KG I   
Sbjct: 277 MKAVLYIVNEKEPVLVLIRGDREIDENKLEKVLGTDNFRLATDEEVQELLGTKKGFIGIF 336

Query: 267 KGFNELVVISEL----VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                + V+ +     V+      N        V     +    +  +      +   K 
Sbjct: 337 NLPENIKVLWDNSLYGVKNLVVALNEPDWHYINVNPGRDFQYGEFVDVAEVREGDPCPKC 396

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPAT----------------GFSIGISRLIVALKSLE 366
                V  G     +       + P                   + IG+SR++ AL    
Sbjct: 397 GSPLKVRRGLELGHIFLLGTRYSEPMKAYFTDRDGKEKPIIMGCYGIGVSRILAALVEQY 456

Query: 367 ------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                      +      +I     D +  +  +         GI   +F    ++ G +
Sbjct: 457 HDDKGIKWPTPVAPFELDIILLNTKDEEMKNVAEKLYLEAEEKGIDV-IFDDREESPGFK 515

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              AD    P  I+ G      G ++++    G++   EI+    + + ++ +
Sbjct: 516 FADADLVGFPYRIVVGKK-VKEGKVEVQSRHTGEKWDVEIEKAIDFVKEKIEE 567


>gi|197105248|ref|YP_002130625.1| prolyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|226701316|sp|B4RBZ9|SYP_PHEZH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|196478668|gb|ACG78196.1| prolyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 439

 Score = 80.3 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 54/462 (11%), Positives = 129/462 (27%), Gaps = 68/462 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++  +I   +R   +  G   +  P L+ +D L +     D  
Sbjct: 31  MIRQEAAGIYAWLPLGLKVLKKIEQVVREEMDRAGAIEVLMPTLQLAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
            + +  ++D   + +       ++   + R   +++  +       +             
Sbjct: 90  GEEMLRIKDRHERDLLYGPTAEEVITDIFRAYIKSYKDLPKNLYNIQWKFRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D   ++A  A   M     +    +G+K                  
Sbjct: 150 MRGREFLMKDAYSFDIDEAAARRAYNRMFCAYLNVYARLGLKAI---------------- 193

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                                          V+   G    D S +F   A+    Q+  
Sbjct: 194 ------------------------------PVRADTGPIGGDLSHEFIILADTGESQVFA 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
               + +       +    ++     ++         E+  ++ + +   +      RG+
Sbjct: 224 HRDLVEMGAPGPDIDWDGDLE--PLVQQRTRLYAASDEMHDQARFETEAPEDKRMTARGI 281

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           E      +      P+  +   P         G Y   VSR  G  + A+    GI    
Sbjct: 282 EVGHIFYFGEKYSRPMNAKVAGPDGAERFVHMGSYGVGVSRLVGAIIEASHDEAGI---- 337

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                     +++   G  ++     ++   +  +     L+ AG    +     +  G 
Sbjct: 338 -------VWPDSVAPFGAAVVNLRPGEAAVDAVAEQAYGALQAAGKEPLLDDRDER-PGA 389

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +    D    P  +I G    + G+++IK  A G+  +  + 
Sbjct: 390 KFASLDLVGVPWQLIVGPKGVAEGVVEIKRRATGERQTLPLD 431


>gi|288553027|ref|YP_003424962.1| prolyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544187|gb|ADC48070.1| prolyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 572

 Score = 80.3 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 52/548 (9%), Positives = 143/548 (26%), Gaps = 81/548 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G         R+ +++   +R   +  G   +  P +  ++ L +     D+ 
Sbjct: 31  MIRQIAAGVYSYLPLAKRVLHKVESIVREEMDAAGAQELTMPTMHPAE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +  +L     ++   + R    ++  +       +             
Sbjct: 90  GGELMRLKDRHDRDFALGPTHEEVITSILRDSISSYKKLPVNLYQIQTKFRDERRPRFGL 149

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKI 182
              +           +   +  E    M D    +  +    +   I +   + G     
Sbjct: 150 LRGREFMMKDAYSFHATPESLDEAYKEMYDAYSRIFSRAGLTFRPVIADSGAIGGKDTHE 209

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN-------------SGDFTKG 229
            +   D   + +      D      +  VK+   +   +                + +  
Sbjct: 210 FMALADVGEDTIAYSDESDYAANIEMAAVKINYVKPDVEAEDRTKVDTGSAKTIEEVSTA 269

Query: 230 ANLTSEQ-IDIMVSFLSIDLEKSMHELYELVKGTIAGEK------GFNELVVISELVRKS 282
            ++  +Q I  ++  +  +    +      +       +       F E   +++++   
Sbjct: 270 LSIREDQIIKTLLVSIDEEWVLVLLRGDHELNDIKLKHELSAGAIRFAEASEVADILSAP 329

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
             N   +      +      +  V  A+ G    N     V         +Y  L    +
Sbjct: 330 VGNIGPVGADGVKIIADHAVSAMVN-AVCGANEENYHFTGVTADRDFKVDQYADLRFIKE 388

Query: 343 GQNVPA------------------TGFSIGISRLIVALKSLES----------------- 367
           G   P                    G     +     L                      
Sbjct: 389 GDPSPCGKGTIRFAQGIEVGQVFKLGTVYSEAMNATILDENGKTQPMIMGCYGVGVSRTV 448

Query: 368 --------------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                            ++      L+T    +++     +   Q L+  G    ++   
Sbjct: 449 AAIIEQHHDENGIVWPPSVAPYDVHLLTLNSKNAEQSELSEELYQSLKKTGFDV-LYDDR 507

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +  G + K +D    PL +  G    + G++++K    G+ +   + +     + +   
Sbjct: 508 PERAGVKFKDSDLIGIPLRVSVGKR-AAEGIVEVKIRKSGEVIEVAVADLAEVLKTQQR- 565

Query: 474 ITIPISEL 481
               + EL
Sbjct: 566 ---KLEEL 570


>gi|241957233|ref|XP_002421336.1| serine/threonine-protein kinase, putative [Candida dubliniensis CD36]
 gi|223644680|emb|CAX40670.1| serine/threonine-protein kinase, putative [Candida dubliniensis CD36]
          Length = 1747

 Score = 80.3 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 79/489 (16%), Positives = 165/489 (33%), Gaps = 65/489 (13%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            +  + ++I+  +  I+ N+G        +E  ++         +  + V+   D  G  +
Sbjct: 1104 DYLLFDKIMKELVKIFINHG-------AIENLNTNLVLPKAPSQSRELVYDFLDRSGAVL 1156

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
            +L YDLT P AR++++   TI    R        V             F       +  +
Sbjct: 1157 TLPYDLTLPTARFLSKTDLTIPKTYRHEFVYRPNVRGIGIPDRYSAVNFDIAGGSELNKA 1216

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE-KIGLHGDDKLNERLIVLR 198
               A    C+ + D +        +  I IN+  ILD ++    G  G D+  +  I   
Sbjct: 1217 TLFAHDAECLKVIDEIVNTLPCFKNTIIVINHYDILDAVVSFSFGNVGIDEKKKLDIFGV 1276

Query: 199  AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
                        +K  L E   D     T   +L           ++ ++EK+  +L +L
Sbjct: 1277 LSQLGIDKSPDEIKRYLRE---DFQVPHTVTKDLVENFN------VTCEVEKARQKLQKL 1327

Query: 259  VKGTI---AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
            +  +      E+ +  L+ + +++++    ++ I    +      Y  G +++A+     
Sbjct: 1328 MVDSPQLLKVERAYTYLIEVVKILKQMNIKTSMIFNPLSNYNSKYYIHGIMFQAVF---- 1383

Query: 316  MNEKQKPVVFGSVGGGGRYDGLVSRF-----KGQNVPATGFSIGISRLIVALKSL----- 365
              +  +   +  V  GGRYD L+  F     K       GFS+  S + + +K+L     
Sbjct: 1384 --KPDRSKRYTRVVTGGRYDSLIGSFSNVTTKQITPHGVGFSLTTSLVFILMKTLISRGK 1441

Query: 366  -ESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             +    N  +     +         L++             I A++   ++K     L+ 
Sbjct: 1442 SKLDLVNKWKGNRCKVLISSTQQQFLNQVGYQLVSKFWNKNISADITSVAAKTQDEILQN 1501

Query: 424  ADRRNCPLAIIQ--------------GTGER-------SRGM----LQIKDLAKGKELSR 458
             +       +I               G             G     L++K++  GKE+  
Sbjct: 1502 GNAEGAIWIVIIRSLPIIGNSLPSISGASALGSIRRSKKSGSGFKPLKLKNIVTGKEIDL 1561

Query: 459  EIKNNESWR 467
            +      + 
Sbjct: 1562 DYDEVIDYL 1570


>gi|225852336|ref|YP_002732569.1| prolyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256044499|ref|ZP_05447403.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256113355|ref|ZP_05454213.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256264165|ref|ZP_05466697.1| prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|260563853|ref|ZP_05834339.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265990923|ref|ZP_06103480.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994761|ref|ZP_06107318.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|114152175|sp|Q8YGL8|SYP_BRUME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782889|sp|C0RIF7|SYP_BRUMB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225640701|gb|ACO00615.1| prolyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|260153869|gb|EEW88961.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|262765874|gb|EEZ11663.1| prolyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263001707|gb|EEZ14282.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094383|gb|EEZ18228.1| prolyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408844|gb|ADZ65909.1| prolyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538559|gb|ADZ86774.1| prolyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 442

 Score = 80.3 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 123/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQKREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                      V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------TVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 339 IWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATIDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 432


>gi|17987423|ref|NP_540057.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|17983114|gb|AAL52321.1| prolyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
          Length = 445

 Score = 80.3 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 123/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 41  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 99

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 100 QDRQKREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 157

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 158 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 217

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 218 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 250

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                      V          +E+   ++  +           S    RG+E      +
Sbjct: 251 ----------TVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 293

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 294 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 341

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 342 IWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATIDL 400

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 401 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 435


>gi|241204106|ref|YP_002975202.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857996|gb|ACS55663.1| prolyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 440

 Score = 80.3 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 60/448 (13%), Positives = 122/448 (27%), Gaps = 53/448 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR+     G   +  P L+ ++ L +     D   K +  +
Sbjct: 38  GIYSWLPLGKRVLDKVNAIIRDEQNRAGAIELSMPTLQSAE-LWQESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D        R  L                                       + +    
Sbjct: 97  KDRQD-----RPML---------------------------------YGPTNEEMVTDIF 118

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            +   S +     +  +     + +  +           K                    
Sbjct: 119 RSSVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMF 178

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              LR  D+L    +  ++   G      S +F   A+    ++     F+  D+  + H
Sbjct: 179 AAYLRTFDRLGLRAI-PMRADTGPIGGKLSHEFIILADTGESEVFCHKDFVDFDIPGA-H 236

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
             ++ V+G  A    +  L   +  +      +   +      RG+E      +      
Sbjct: 237 TDFDSVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFYFGTKYSE 296

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P+  + Q P         G Y         + VPA   +      I+          ++ 
Sbjct: 297 PMGAKVQGPDGKEHFVHMGSY----GIGPTRLVPAIIEASHDDNGII-------WPASVA 345

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I     D       ++    L  AG          +  G +   AD    P+ I
Sbjct: 346 PFDIVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRA-GTKFATADLIGVPVQI 404

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           I G    + G +++KD   G   +  I+
Sbjct: 405 IAGPRAVANGEVEVKDRKTGARETMTIE 432


>gi|229544273|ref|ZP_04433332.1| tRNA synthetase class II (G H P and S) [Bacillus coagulans 36D1]
 gi|229325412|gb|EEN91088.1| tRNA synthetase class II (G H P and S) [Bacillus coagulans 36D1]
          Length = 374

 Score = 79.9 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 127/401 (31%), Gaps = 59/401 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D     ++ R  + +  R   E   +  I TPL+EY+D+            + +
Sbjct: 3   LPEGSQDEMGTVVKNRATVFEMFRRTAEKRNYTEISTPLVEYADTFTN--EKVGMKLQNM 60

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
               D  GQ   LR D T  +AR +++              G VFR +  G     +  Q
Sbjct: 61  LKWFDGRGQIEVLRPDWTTSIARALSQKPFRACK---WAYQGSVFRMDTPG----LESRQ 113

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             ++ V       + E      D    +G+      + + +  I + ++ ++        
Sbjct: 114 VGIEMVDLPELLGEGECLFFAHDFFNRLGVTG--VMVELGHAGIFEELVARL-------- 163

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                       L+   +  ++  + + R D   +    +       ++     +    +
Sbjct: 164 -----------NLEDGQVDRLRGAMHDKRKDEVFEIASLSGNAKIAAELAGLVDAYGSFE 212

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +    E  K   A       +  + ++    G     I I    V+ L YYTG ++   
Sbjct: 213 MIRTFQERWKTEPALSDMLIHIEKLGKICMAVGMED--IMIDLGRVKNLPYYTGILFRGF 270

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           L     +             GGRYD ++     +   A G +     L   L   E    
Sbjct: 271 LKQTGAS----------CFSGGRYD-MLYEQFHRQTTAVGIAFDADMLAEELAQEEKPEK 319

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEM 409
                       +    ++L++     + LR A  G   ++
Sbjct: 320 ----------ICIIAGEETLAE----AEKLRAAYGGKIVDI 346


>gi|116512064|ref|YP_809280.1| ATP phosphoribosyltransferase regulatory subunit [Lactococcus
           lactis subsp. cremoris SK11]
 gi|122940157|sp|Q02YW4|HISZ_LACLS RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|116107718|gb|ABJ72858.1| ATP phosphoribosyltransferase regulatory subunit [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 318

 Score = 79.9 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 73/361 (20%), Positives = 129/361 (35%), Gaps = 55/361 (15%)

Query: 15  FADCPTKEI--------RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
                 +E             ++   +RN++E+  +  +  P  E  +       D    
Sbjct: 4   MNYLLPEESGEMTLSGITTLRKMEQKLRNLFESQNYQEVMPPNFESVELYT--GLDAGFE 61

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F   + +G+ I+LRYD T PLAR  A    + +   R    G VFR EK   GR  
Sbjct: 62  QEKMFQFINHEGKSIALRYDFTVPLARNFA---LSELKEARYSYFGKVFRKEKRHKGRRT 118

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q   + +G S  T D E+  +   TLEA+ +K     IG          L       
Sbjct: 119 ESYQVGTELLGLSEVTGDQEILGLTFMTLEALTLKNTIVEIGSAAFFKRLCELSGGDAPL 178

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +L            L+K  L G+K  + +     +      A +T+  +  M   +  
Sbjct: 179 FSEL------------LEKKSLSGMKAFVDKHEMRGAPRDLLLALMTTTDLPTMKKLVLA 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             ++ + +  E+++     +K                    +I     +V  + YYTG +
Sbjct: 227 TGDEKLSQALEMLEALNLPDK----------------TAICQIHYDFAMVPAMGYYTGLM 270

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           ++  +            V  +V  GGRYD L+ +F       TG       +   +K L 
Sbjct: 271 FQVYVE----------GVAQAVISGGRYDKLLKQFGK----TTGSIGFCVHMENVMKGLN 316

Query: 367 S 367
           +
Sbjct: 317 N 317


>gi|145253605|ref|XP_001398315.1| protein kinase (Gcn2) [Aspergillus niger CBS 513.88]
 gi|134083883|emb|CAK43014.1| unnamed protein product [Aspergillus niger]
          Length = 1592

 Score = 79.9 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 76/493 (15%), Positives = 145/493 (29%), Gaps = 61/493 (12%)

Query: 10   ELPRGFADC----------PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            + P+ F D              E+ I+  + + + +I+  +G   +ET   +      + 
Sbjct: 974  QSPKKFEDIAWDMDSRGTPGATELLIQGLVKEKLTSIFRRHGA--VET---QRQMLFPRS 1028

Query: 60   LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
                   N G   L D  G  + L +DLT P AR +                      E 
Sbjct: 1029 ----QHYNNGAVRLLDSSGNLLQLPFDLTLPNARAI----PRQDPSLEKTYAFGTVYREL 1080

Query: 120  HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
               G  R   + D D V  +      ++ +  A+ ++ +     ++         L    
Sbjct: 1081 PHGGEPRTHKEVDFDIVSHNTL----DLALKEAEVIKVLDEIIEEF-------PPLRSSP 1129

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                ++  D L   +   R          + V  L     T         +         
Sbjct: 1130 MCFVINHSDLLQTIMEFCRITPSQIPRVKEVVSKLNVGKWTMQKIRSELRSPAIGVASTS 1189

Query: 240  MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRG 298
            +      D   S  ++ + ++  + G      L  I   +           +     +  
Sbjct: 1190 LDDLARFDFRDSPKQVQKRLRAIMQGTIFAERLAPIFARINLLVAYLQNFDVKRKVYMNP 1249

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ------NVPATGFS 352
            L       +   + F  + + ++  VF     GGRYD LV  F+ +         A GF+
Sbjct: 1250 LGSLNDKFFRGSILFQCVFDSKRRDVF---AAGGRYDSLVQEFRPKVLASRSQTHAVGFN 1306

Query: 353  IGISRLIVALKSLESSTNN------------IKEMGPVLITTMDHDSDSLSKY-QMYTQM 399
            +   RL  A+     +                 +     +     D   L        Q 
Sbjct: 1307 LSWDRLSSAMLEYLGTPAKTPAKSFDMEAGAFWKTRRCDVLVASFDPTVLRTMGIKIVQD 1366

Query: 400  LRTAGIRAEMFLGSSKNFGNQL-KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L    + AE+ + +S +    L KY D  +    +I     + RG  ++K L+  +E   
Sbjct: 1367 LWLNDVSAELAVDAS-SLEELLNKYRDDSH-GWIVIAKQDSQERG-FKVKSLSPREEFDI 1423

Query: 459  EIKNNESWREARV 471
                   W    +
Sbjct: 1424 RGSELVPWLRNEI 1436


>gi|312135279|ref|YP_004002617.1| histidine--tRNA ligase [Caldicellulosiruptor owensensis OL]
 gi|311775330|gb|ADQ04817.1| Histidine--tRNA ligase [Caldicellulosiruptor owensensis OL]
          Length = 393

 Score = 79.9 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 62/340 (18%), Positives = 116/340 (34%), Gaps = 50/340 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK          F D       +   I +   ++++ +G+  +E    E  +      
Sbjct: 1   MSKK----------FVDYYPPTSEMLEEIREKTLSLFKKFGYKIVEPSTFEDYEKSKSLN 50

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                         D DG  ++LR + T  +A  +A    T V+P +    G  ++  + 
Sbjct: 51  GSNTI------KFMDSDGAVVALRNEFTPKVA-EIAAKLQTNVYPLKYCYFGRAYQFIQQ 103

Query: 121 GPGRFRQFIQCDVDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
             G  R+F Q  ++N   S       E+ ++  ++L  +G+    + I +       GI 
Sbjct: 104 EAGDLREFFQAGIENFHISDSFYIDLEVLVLAVESLLELGVNG--FTIDVGEVNFFKGIA 161

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +   +          ++ R +DK D  G++               +F     ++ + ID+
Sbjct: 162 KDCEIDEAS----SEVLCRLVDKKDYIGIE---------------NFLIRKGISQKVIDV 202

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                 +   +   +  +        +     L  I   + K GY    I I   +V+ L
Sbjct: 203 FRCLTRLYGREDKIKEAKKFANNEISKLAIERLSEIYNNIVKLGY-QRYITIDFGMVKHL 261

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
            YYTG ++   L                V  GGRYD L  
Sbjct: 262 NYYTGIIFSGYLPQLGY----------PVLNGGRYDNLCE 291


>gi|254560035|ref|YP_003067130.1| proline-tRNA ligase [Methylobacterium extorquens DM4]
 gi|254267313|emb|CAX23145.1| proline-tRNA ligase [Methylobacterium extorquens DM4]
          Length = 442

 Score = 79.9 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/458 (11%), Positives = 120/458 (26%), Gaps = 55/458 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+ N++ D +R   +  G   I  P ++ +D L +     +  
Sbjct: 32  MIRQEAAGIYAWLPLGLRVLNKVCDVVRAEQDRAGAIEILMPTIQAAD-LWRESGRYEAY 90

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  L+D                                          E        
Sbjct: 91  GKEMLRLKDR--------------------------------------HERELLYGPTAE 112

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + +         S +     +  +     + V  +           K             
Sbjct: 113 EVVTEIFRASTRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAAR 172

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  +  LR  ++L    +  ++   G    D S +F   A     ++    ++L +
Sbjct: 173 HSYNKVFVSYLRTFERLGLRAI-PMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDM 231

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            +     +  + V G       +      ++ +      +   + S    RG+E      
Sbjct: 232 PVPPPSVDFDD-VAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFY 290

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +      P+      P            DG        +       +  + +  +     
Sbjct: 291 FGTKYSTPMKAVVTGP------------DGSERPVHMGSYGIGPSRLVAATIEASHDEAG 338

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               +      V +  +     +           L TAG+   ++    +  G +   AD
Sbjct: 339 IIWPDAIAPFDVALINLKVGDGACDAACAEIQAALETAGLSV-LYDDRDERPGAKFATAD 397

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               P  +I G    + G +++K  A G+  + +  + 
Sbjct: 398 LIGLPWQVIVGPKGLAEGKIELKRRASGERETLDPVDL 435


>gi|86281359|gb|ABC90422.1| prolyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 410

 Score = 79.5 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/455 (13%), Positives = 128/455 (28%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR      G   +  P L+ ++ L +     D   K +  +
Sbjct: 8   GIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMPTLQSAE-LWQESGRYDAYGKEMLRI 66

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEKHGPGRFR 126
           +D   + +       ++   + R   +++  +       +         R        F 
Sbjct: 67  KDRQDRPMLYGPTNEEMVTDIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFM 126

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D     AE +  +M      T E +G               L  I        
Sbjct: 127 MKDAYSFDLTREGAEHSYNKMFAAYLRTFERLG---------------LRAI-------- 163

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                                   ++   G    + S +F   A+    ++     F+  
Sbjct: 164 -----------------------PMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGF 200

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D+    +  ++ V+G  A    +  L   +  +      +   +      RG+E      
Sbjct: 201 DIPGE-NTDFDSVEGLKAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFY 259

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +      P+  + Q P         G Y         + VPA   +      I+      
Sbjct: 260 FGTKYSEPMGAKVQGPDGKEHFVHMGSY----GIGPTRLVPAIIEASHDDNGII------ 309

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++     V+I     D       ++    L+ AG          +  G +   AD 
Sbjct: 310 -WPASVAPFDVVVINMKVGDQACDDTCELIYAALKKAGKDVLYDDTDDRA-GTKFATADL 367

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P+ II G    + G +++KD   G   +  I+
Sbjct: 368 IGVPVQIIAGPRAVANGEVEVKDRKTGARETMTIE 402


>gi|256060932|ref|ZP_05451090.1| prolyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261324932|ref|ZP_05964129.1| prolyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261300912|gb|EEY04409.1| prolyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 442

 Score = 79.5 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/452 (12%), Positives = 119/452 (26%), Gaps = 61/452 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           QD   + +       ++   + R    ++  +      Y I   FR+E        +  +
Sbjct: 97  QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S     +          +  +             R  L  I            
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFA---------RVGLQAI------------ 193

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               ++   G    D S +F   A     Q+    ++L +    
Sbjct: 194 -------------------PMRADTGPIGGDLSHEFIILAGTGESQVYCDRAYLDL---- 230

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                   V G     +   +L  I          ++ +   +   +             
Sbjct: 231 -------AVPGADTDFRNDAQLTDIVTRWTTPYAATDEMHDEADWAKVKPESQVSARGIE 283

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +G       +     G+   G   DG        +       +  + +  +         
Sbjct: 284 VGHIFHFGTKYSEPMGAKVQGP--DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIIWP 341

Query: 371 NIKEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                    I  M    +      +   + L  AG+   +     +  G +    D    
Sbjct: 342 KAIAPFGAGIVNMKLGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDLIGL 400

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           P  +I G    + G +++KD   G+  S  I+
Sbjct: 401 PTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 432


>gi|315230254|ref|YP_004070690.1| threonyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183282|gb|ADT83467.1| threonyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 625

 Score = 79.5 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 91/330 (27%), Gaps = 18/330 (5%)

Query: 148 CMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFG 207
            +  A       IK++      +    +  +               L  LRA    D   
Sbjct: 292 FLRFAACFGQFLIKKDATISYKHLPLRMYELTRYSFRREKRGELSGLRRLRAFTMPDMHT 351

Query: 208 LQGVKLLLGEGRTDN---SGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA 264
           +        E        S +  KG  LT +  ++ + F      ++             
Sbjct: 352 VAKDLKQAMEEFKKQYKLSMEVLKGVGLTPDDYEVAIRFTEDFWNEN------------- 398

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
            +    ELV I            R                    A+    +  E  +   
Sbjct: 399 -KDFVVELVKIIGKPVLIEMWKQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERFG 457

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
                  G+    +      +         I      L++          + P+ +  + 
Sbjct: 458 ITYYDEDGKEKHPLILHCSPSGAIERVMYAILEKQAKLRNQGKKPMYPLWLSPIQVRVIP 517

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            + D L         L  A IR ++   S +    +++ A++   P  I+ G  E+ +G+
Sbjct: 518 VNEDYLDYALYIAGKLEGARIRVDVDDTSDR-LTKKIRKAEKEWIPYIIVVGENEKRQGI 576

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQI 474
           + ++    GK+   ++++     + R    
Sbjct: 577 ITVRKREDGKQYEMQLEDLIKEIKQRTEGF 606


>gi|289434839|ref|YP_003464711.1| hypothetical protein lse_1474 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171083|emb|CBH27625.1| thrS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 640

 Score = 79.5 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 65/459 (14%), Positives = 132/459 (28%), Gaps = 81/459 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E               
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAEL-------------G 359

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 360 MMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDIKDY 416

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   D E + +
Sbjct: 417 SFRLSYRDPKNT----------EKYFDDDAMWDKAQAMLKSAMDEMGMDYFEADGEAAFY 466

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++   I       R +  + G V   +  F
Sbjct: 467 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRG-VVSTMERF 525

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                +A   +E    N  
Sbjct: 526 VAYLIEEYKGAFPTW-------------------------------LAPVQMELIPVNAD 554

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                           L   +     L+ AG+R E+    ++  G +++ A  +  P A+
Sbjct: 555 AH--------------LDYAKGVQDKLQRAGLRVEVD-DRNEKLGYKIREAQTKKIPYAL 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E   G + ++        + E+    S     V+
Sbjct: 600 VLGDQEMESGTVNVRRYGSKDSETMELDTFISQVVQEVS 638


>gi|85373222|ref|YP_457284.1| ATP phosphoribosyltransferase [Erythrobacter litoralis HTCC2594]
 gi|84786305|gb|ABC62487.1| ATP phosphoribosyltransferase [Erythrobacter litoralis HTCC2594]
          Length = 373

 Score = 79.5 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 5/192 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    E R     + +     +++G+D +  PL+E+  SL      +    + +
Sbjct: 13  LPIGLEDRLPAEARKATHAMRAALGAMDSHGYDRVRPPLIEFERSLA--GRMDGVQTRRL 70

Query: 71  FSLQDDDG-QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D +  + ++LR D+T  + R  +        P R    G V           RQ +
Sbjct: 71  FRFVDPESLRTLALRSDMTPQVGRIASTGLADAPRPLRLCYAGDVATITADQLDPARQRL 130

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   + +G+    A +E+ M+  + +EA G +     +      ++D +        +D+
Sbjct: 131 QLGAELIGADTVAAASEIVMLAVEAVEATGARG--ISVDFTLPDLVDVLAADAFALAEDR 188

Query: 190 LNERLIVLRAID 201
           ++     L   D
Sbjct: 189 IDAVRRELDTKD 200


>gi|307721886|ref|YP_003893026.1| tRNA synthetase class II (G H P and S) [Sulfurimonas autotrophica
           DSM 16294]
 gi|306979979|gb|ADN10014.1| tRNA synthetase class II (G H P and S) [Sulfurimonas autotrophica
           DSM 16294]
          Length = 282

 Score = 79.5 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 104/303 (34%), Gaps = 26/303 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+P G      +  +++  I +   +I +  G++ I TP+  Y     K + DE   
Sbjct: 3   LEHEIPNGSKLYFGESAKVKRHIENIASDILDKNGYEEIVTPIFSYHQ--HKSIADE--- 57

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  + D+    +SLR D T  + R + +   +     + + I PVF        +  
Sbjct: 58  -KELIRINDEKNNALSLRADSTIDVVRIIEKRLGSNTKQKKWFYIQPVFTYPTTEQYQVG 116

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                +              +  +  +  E + +K       I   ++L  + +++ +  
Sbjct: 117 VEFMGEKKLSS---------VASLALEIFEKLHVKPLMQISNIKIPELLVAMFDELSIDD 167

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
              +N        IDK     ++ +  L+     +   D     N   E I I +  +  
Sbjct: 168 FRHIN--------IDKFINLNVEWLSELVYLQYVEQIDDII---NKVPEAIKIELQKMKD 216

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              ++  E   L     A    ++EL     +  +      R K +     G   YT  +
Sbjct: 217 LCSEAGCENAVLAPMYYAKMLYYDELFFRCIVGNEVYARGGRYKNAELTSVGFAIYTDTL 276

Query: 307 YEA 309
            +A
Sbjct: 277 CDA 279


>gi|300172925|ref|YP_003772090.1| ATP phosphoribosyltransferase regulatory subunit [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299887303|emb|CBL91271.1| ATP phosphoribosyltransferase, ATP phosphoribosyltransferase
           regulatory subunit [Leuconostoc gasicomitatum LMG 18811]
          Length = 534

 Score = 79.5 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 76/483 (15%), Positives = 166/483 (34%), Gaps = 72/483 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D   + +  + +I   I        F  I TPL+E      ++  D       VF L
Sbjct: 9   GSHDEFGEALVQKQQITHLISKTLNKKAFVAINTPLIERESVFEQYQHD------NVFHL 62

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D  G+ + LR DLT P+AR++A          + Y IG VFR   +  G + Q  Q  +
Sbjct: 63  RDQMGENLVLRPDLTLPVARFLASKSQ-QARVQKFYYIGDVFRRTDYLSGEYNQETQAGI 121

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           + +G S+  A+ +   +M D  +    +  D  + I++ +++D +L  + +    +   +
Sbjct: 122 ELIGDSSFKAEIQALDIMLDFAQQF--EIADVQVVISDTRLIDRVLGTLDISSKQQKLLK 179

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
               +AI+  +    + V++ + +                       ++   +   +   
Sbjct: 180 ----QAIESKNMTAFEKVRMTIKDF-------------------PAHLTRWPLAFGEDGE 216

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
            +   ++         +  + ++  + +  Y    + +         YYTG +    +  
Sbjct: 217 TVMWQLQDLPEVNDLVDRWLKLATFIHEH-YPDVAVTVDLAAASPQPYYTGTIIRGFVPS 275

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                         +  GGRYD L+  F+ +++PA G    I  ++   +      ++  
Sbjct: 276 LG----------RYLFSGGRYDRLLESFQTESLPAVGMGFNIDTIMA--EWQREVADHNP 323

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF---------------- 417
           E   V++                     +AGI         +                  
Sbjct: 324 EEPIVVVLAKGRVEKDTRPLLK------SAGIDTTPLENQDRKLVFDSPDGIYRFILVKP 377

Query: 418 GNQLKYADRRNCPLAIIQGTGERSR---GMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            + +KY DR       I G+   +        + +L  G + +  +   +++    + + 
Sbjct: 378 DDVIKYLDR-GIGDVGIVGSDTIAEQIQNHYDVLNLQTG-QAAFVLAAPQNFMINGIQRK 435

Query: 475 TIP 477
            I 
Sbjct: 436 RIA 438


>gi|256810117|ref|YP_003127486.1| threonyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793317|gb|ACV23986.1| threonyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 618

 Score = 79.5 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 99/342 (28%), Gaps = 25/342 (7%)

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
           E+ +  A       +K++ Y +       L  +      +        L  LR     D 
Sbjct: 279 ELMLRFAACFGQFMMKKDMYLLPRYLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDM 338

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
             +        E       +  K  +       ++  F     E+     +++ K     
Sbjct: 339 HTVCLDLKQAMEEFEKQFWECLKTGDDLDLSYSVIFRFTKYFFEEHRDWFFKIAKEY-KN 397

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           + G + ++ I    +        I +  ++ R +E  T       +   V + K+  +  
Sbjct: 398 KYGKDVILEILPKRKHYWVGKVDIAVIDSLGRPIENPT-------VQIDVESAKRFNIKV 450

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
                G  Y  ++      ++      +     I A      +      + P+ +  +  
Sbjct: 451 H-TNEGEVYPIILHCSPTGSIERVLCGLLEKAAIEA--EKGKAPMLPVWLSPIQVRVIPV 507

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
                       + LR   IRA+       +   +++ A +   P  ++ G  E   G L
Sbjct: 508 AERHYDYALKIAEKLRENNIRADFDDRED-SVSKKIRNAGKEWIPYVVVVGDEEMDSGEL 566

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
            +                E     +  +  + + EL+  +KK
Sbjct: 567 TV-------------TVREKSTLKKPHKEKMTLDELIDKIKK 595


>gi|121634605|ref|YP_974850.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis FAM18]
 gi|166219834|sp|A1KT70|HISZ_NEIMF RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|120866311|emb|CAM10052.1| hypothetical protein NMC0764 [Neisseria meningitidis FAM18]
 gi|308388999|gb|ADO31319.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis alpha710]
 gi|325129956|gb|EGC52755.1| hypothetical protein NMBOX9930304_1258 [Neisseria meningitidis
           OX99.30304]
 gi|325132032|gb|EGC54730.1| hypothetical protein NMBM6190_1258 [Neisseria meningitidis M6190]
 gi|325135966|gb|EGC58576.1| hypothetical protein NMBM0579_1300 [Neisseria meningitidis M0579]
 gi|325137786|gb|EGC60361.1| hypothetical protein NMBES14902_1409 [Neisseria meningitidis
           ES14902]
          Length = 383

 Score = 79.5 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 135/409 (33%), Gaps = 51/409 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLLNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L    
Sbjct: 123 LQAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK        VK    +G    +                         
Sbjct: 181 SATLLALM---QDKDTGTVEAQVKAWKLDGMWAKAFSLLPRL---------------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +    A     +EL  + +      +    I I  + +R   Y+TG +Y 
Sbjct: 223 REVLSDARGRLPDLSAVGGALDELQAVCD-----AFPDCEIHIDLSELRVDNYHTGLLYA 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  +  PATGFS  +   I  L + E  
Sbjct: 278 AYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPTSERQ 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         +  D++     +   + LR  G    +  G   N 
Sbjct: 327 P------------AVLVDAEDAEAAREAVEALREQGQCVVIDYGIGHNV 363


>gi|75765683|pdb|1Z7M|A Chain A, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
           Lactococcus Lactis
 gi|75765684|pdb|1Z7M|B Chain B, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
           Lactococcus Lactis
 gi|75765685|pdb|1Z7M|C Chain C, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
           Lactococcus Lactis
 gi|75765686|pdb|1Z7M|D Chain D, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
           Lactococcus Lactis
 gi|75765691|pdb|1Z7N|A Chain A, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
           Lactococcus Lactis With Bound Prpp Substrate
 gi|75765692|pdb|1Z7N|B Chain B, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
           Lactococcus Lactis With Bound Prpp Substrate
 gi|75765693|pdb|1Z7N|C Chain C, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
           Lactococcus Lactis With Bound Prpp Substrate
 gi|75765694|pdb|1Z7N|D Chain D, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
           Lactococcus Lactis With Bound Prpp Substrate
          Length = 344

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 130/363 (35%), Gaps = 51/363 (14%)

Query: 18  CPTKEIRI--------RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
              +E             +I   +R ++    +  +  P  EY+        +    N+ 
Sbjct: 23  LLPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQE 82

Query: 70  -VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F     +GQ I+LRYD T PL R  ++         R    G +FR EK   GR  + 
Sbjct: 83  KMFQFIKHEGQSITLRYDFTLPLVRLYSQ--IKDSTSARYSYFGKIFRKEKRHKGRSTEN 140

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++  G SA+ ++ E+  +    +E +G+ +  + IG           +++    D 
Sbjct: 141 YQIGIELFGESADKSELEILSLALQVIEQLGLNKTVFEIGSA------KFFQRLCQLADG 194

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                  +L   D      L G+   + +                + ++  + + ++   
Sbjct: 195 STELLTELLLKKD------LSGLNAFIEKNNFSKELRGLLKEIFITNELSRLENLVTNTK 248

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +  +   ++ +K          E      +++        I I   +V  ++YYT  +++
Sbjct: 249 DDVLISSFDQLK----------EFSEKLSMIK-------PIIIDLGMVPKMDYYTDLMFK 291

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                  +  GGRYD L+S F  +   A GF   +  ++ AL+  E  
Sbjct: 292 AYSSAANQ----------PILSGGRYDQLLSNF-QEEAFAIGFCCHMDTILKALERQELE 340

Query: 369 TNN 371
            +N
Sbjct: 341 EDN 343


>gi|303232756|ref|ZP_07319441.1| proline--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481242|gb|EFL44317.1| proline--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 574

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 73/548 (13%), Positives = 149/548 (27%), Gaps = 97/548 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R   +I   IR+  E      + TP+L  ++ L       D  
Sbjct: 35  MIRKAASGLYTYLPLAWRSILKIEGIIRDEMEAIDCQEMLTPILTSAE-LWHQSGRWDVY 93

Query: 67  NKGVFSLQDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D      +L    + T   L R    ++  +      Y I   FR+E+    
Sbjct: 94  GPELMRLTDRHDHEYALGPTHEETYVDLVRSELRSYKQLP--VTLYHIQDKFRDERRPRF 151

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI----- 178
              +  +  + +  S              ++L+     +   +  +  R  +  +     
Sbjct: 152 GLMRSREFIMKDAYS---------FCATQESLQQCYDDQKQAYANVARRCGIRALPVVAD 202

Query: 179 -----------LEKIGLHGDDKLNERLIVLRAIDKLDKFGL----QGVKLLLGEGRTDNS 223
                         +   G+ +L        A D              +  L +  T   
Sbjct: 203 SGQIGGDTSVEFMALADAGEAELVYCDSCGYAADAEAATTRIAIENTTQTTLKKVHTPQC 262

Query: 224 G---DFTKGANLTSEQIDIMVSFLSIDLEKSM-----HELYELVKGTIAGEK--GFNELV 273
               D      + + Q    ++ ++ D    +           VK +    +    ++  
Sbjct: 263 STIDDLAAQLGVDALQTRKALALVAEDGRACVVFVPGMRTLNDVKASHVFGEYHMMDDEE 322

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
           +    + K       +     + + +       +  I G   ++      V G     G 
Sbjct: 323 LTQFGLVKGFIGPINLPQDVHVYQDISLQDATTW--ICGANEVDYHLVGAVPGRDFELGE 380

Query: 334 YDGLVSRFKGQNVPAT-------------------------------------------G 350
           Y  +VS   G   P                                              
Sbjct: 381 YVDVVSAQAGDGCPRCAASLKSARGIEISQVFQLGTKYSSAMGATFMDEDGTEKPFIMGC 440

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPV-----LITTMDHDSDSL-SKYQMYTQMLRTAG 404
           + IG+SR + A+       + I     V      +  +D + D +  +     + L   G
Sbjct: 441 YGIGVSRTLAAVVEQHYDDHGIIWPISVAPYEVEVIALDTNDDVIWPQATAIAEKLTARG 500

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I   +     +  G +   AD    P  ++ G     RG +++K  A G  +   +    
Sbjct: 501 IEVIVDDRELR-PGVKFNDADLMGFPYQVVCGKKALERGCVELKCRADGSRVEVALDAIV 559

Query: 465 SWREARVA 472
           S  E R+A
Sbjct: 560 SELEQRIA 567


>gi|254701588|ref|ZP_05163416.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261752141|ref|ZP_05995850.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261741894|gb|EEY29820.1| prolyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 442

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 125/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       + + + L  AG+   +     +  G +    D 
Sbjct: 339 IWPKAIAPFGAGIVNMKPGDEGCDGVSEKFYEALTNAGVDPLLDDKDER-PGAKFATMDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 432


>gi|256369253|ref|YP_003106761.1| prolyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|255999413|gb|ACU47812.1| prolyl-tRNA synthetase [Brucella microti CCM 4915]
          Length = 442

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 124/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLCI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 339 IWPKAIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIE 432


>gi|262279701|ref|ZP_06057486.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           calcoaceticus RUH2202]
 gi|262260052|gb|EEY78785.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           calcoaceticus RUH2202]
          Length = 388

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 79/423 (18%), Positives = 150/423 (35%), Gaps = 60/423 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++  ++     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVIEKLRREALDFLAVRGYQLVYTPFIEYIESLSSLSESNQDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   +    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGVRADMTPQVARIDA-HVRPVEGVARYCYSGTVLHTKPQNFNATRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   +E +   +   H+ + +  +   +++  GL  +++
Sbjct: 128 QLGAELYGHDSIEADVEMVDVMLGLIENIYTLQG-AHLDLGHVGLFRSLVKYAGLSKNEE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    ++ N G         S  ++ + + LS ++ 
Sbjct: 187 HELSDLYQR----------KALPELAEFTQSLNMGSDFYALGRYSSDLEALQTNLSANIL 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +               +   + L    E ++   + +  I I    +R   Y+TG +Y  
Sbjct: 237 QDAE-----------FKSALDALKTTLEQIKGR-WPNLNIGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  +  PATGFS         L +L +  
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSCD-------LYALGA-- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            N       ++     + D LS     +   R  G+R    LG+           D  + 
Sbjct: 325 -NQFAEIETVVAPKGSEQDLLSA---ISNA-RAQGLRVVQLLGND----------DLSSI 369

Query: 430 PLA 432
           P A
Sbjct: 370 PYA 372


>gi|68068629|ref|XP_676225.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56495823|emb|CAH99712.1| hypothetical protein PB000455.03.0 [Plasmodium berghei]
          Length = 232

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 14/115 (12%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +   + +  +  +     + L    I  E    + +    Q  YA  +  PL II G 
Sbjct: 116 VEVLICNTNKHAFKQTIELCKKLWDENIATEFVYFNDQRLQKQFSYALEKQIPLVIIIG- 174

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            E  RG++++++L                +   V    I +++ V  +K     N
Sbjct: 175 DEIERGVIKLRELT-------------LDKSKSVGDKEIKLADCVQEIKNYFNCN 216


>gi|299770943|ref|YP_003732969.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter sp.
           DR1]
 gi|298701031|gb|ADI91596.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter sp.
           DR1]
          Length = 388

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 79/423 (18%), Positives = 150/423 (35%), Gaps = 60/423 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++  ++     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVIEKLRREALDFLAVRGYQLVYTPFIEYIESLSSLSESNQDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   +    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGVRADMTPQVARIDA-HVRPVEGVARYCYSGTVLHTKPQNFNATRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   +E +   +   H+ + +  +   +++  GL  +++
Sbjct: 128 QLGAELYGHDSIEADVEMVDVMLGLIENIYTLQG-AHLDLGHVGLFRSLVKYAGLSKNEE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    ++ N G         S  ++ + + LS ++ 
Sbjct: 187 HELSDLYQR----------KALPELAEFTQSLNMGSDFYALGRYSSDLEALQTNLSANIL 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +               +   + L    E ++   + +  I I    +R   Y+TG +Y  
Sbjct: 237 QDAE-----------FKSALDALKTTLEQIKGR-WPNLNIGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  +  PATGFS         L +L +  
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSCD-------LYALGA-- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            N       ++     + D LS     +   R  G+R    LG+           D  + 
Sbjct: 325 -NQFAEIETVVAPKGSEQDLLSA---ISNA-RAQGLRVVQLLGND----------DLSSI 369

Query: 430 PLA 432
           P A
Sbjct: 370 PYA 372


>gi|190891305|ref|YP_001977847.1| prolyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|226701323|sp|B3PW17|SYP_RHIE6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|190696584|gb|ACE90669.1| prolyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 440

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 59/448 (13%), Positives = 120/448 (26%), Gaps = 53/448 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR      G   +  P L+ ++ L +     D   K +  +
Sbjct: 38  GIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMPTLQSAE-LWQESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D        R  L                                       + +    
Sbjct: 97  KDRQE-----RPML---------------------------------YGPTNEEMVTDIF 118

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            +   S +     +  +     + +  +           K                    
Sbjct: 119 RSSVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMF 178

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              LR  D+L    +  ++   G    + S +F   A+    ++     F+  D+     
Sbjct: 179 AAYLRTFDRLGLRAI-PMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVDFDIPGEST 237

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  + V+G  A    +  L   +  +      +   +      RG+E      +      
Sbjct: 238 DF-DSVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGERLSARGIEAGHIFYFGTKYSE 296

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P+  + Q P         G Y         + VPA   +      I+          ++ 
Sbjct: 297 PMGAKVQGPDGKEHFVHMGSY----GIGPTRLVPAIIEASHDDNGII-------WPASVA 345

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I     D       ++    L  AG          +  G +   AD    P+ I
Sbjct: 346 PFDVVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRA-GTKFATADLIGVPVQI 404

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           I G    + G +++KD   G   +  I+
Sbjct: 405 IAGPRAVANGEVEVKDRKTGARETMTIE 432


>gi|218767930|ref|YP_002342442.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis Z2491]
 gi|20978511|sp|Q9JV26|HISZ_NEIMA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|121051938|emb|CAM08244.1| hypothetical protein NMA1023 [Neisseria meningitidis Z2491]
 gi|319410178|emb|CBY90514.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis WUE 2594]
 gi|325134043|gb|EGC56698.1| hypothetical protein NMBM13399_1390 [Neisseria meningitidis M13399]
          Length = 383

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 135/409 (33%), Gaps = 51/409 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQSDGLLNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L    
Sbjct: 123 LQAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK  +     VK    +G    +                         
Sbjct: 181 SATLLALM---QDKDTETVEAQVKAWKLDGMWAKAFSLLPRL---------------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +    A      EL  + +      +    I I  + +R   Y+TG +Y 
Sbjct: 223 REVLSDARGRLPDLSAVGGALGELQAVCD-----AFPDCEIHIDLSELRVDNYHTGLLYA 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E  
Sbjct: 278 AYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAIERQ 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         +  D++         + LR  G    +  G   N 
Sbjct: 327 P------------AVLVDAEDAEAAHEAVEALREQGQCVVIDYGIGHNV 363


>gi|262369627|ref|ZP_06062955.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           johnsonii SH046]
 gi|262315695|gb|EEY96734.1| ATP phosphoribosyltransferase regulatory subunit [Acinetobacter
           johnsonii SH046]
          Length = 388

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 68/347 (19%), Positives = 127/347 (36%), Gaps = 36/347 (10%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++   +     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVIETLRRQALDFLATRGYQLVYTPFIEYIESLSSLSESNQDLDLAT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   +    R    G V   +  G    R  +
Sbjct: 69  FKVIDQLSGRLLGVRADMTPQVARIDA-HVHPVEGVARYCYAGTVLHTKPQGFNTTRTPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  GS +  AD E+  +M   LE  G      H+ + +  +   +++  GL+   +
Sbjct: 128 QLGAELFGSDSIDADVELIDVMISLLEKTGFADG-IHLDLGHVGLFRSMVKVAGLNKATE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    +  N G         +  +D + + LS++  
Sbjct: 187 RQLSDLYQR----------KALPELAEFTQDLNFGADFYTLGRYASDLDALQTHLSLE-- 234

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                    V      +  F+ L      ++   + + ++ I    +R   Y+TG +Y  
Sbjct: 235 ---------VIADAEFKHAFDALKTTQSEIQAR-WPNLQMGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
                             +  GGRYDG+   F  +  PATGFS  + 
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSCDLY 320


>gi|163850499|ref|YP_001638542.1| prolyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|226701309|sp|A9W1L5|SYP_METEP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163662104|gb|ABY29471.1| prolyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 441

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/458 (11%), Positives = 120/458 (26%), Gaps = 55/458 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+ N++ D +R   +  G   I  P ++ +D L +     +  
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLNKVCDVVRAEQDRAGAIEILMPTIQAAD-LWRESGRYEAY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  L+D                                          E        
Sbjct: 90  GKEMLRLKDR--------------------------------------HERELLYGPTAE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + +         S +     +  +     + V  +           K             
Sbjct: 112 EVVTEIFRASTRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAAR 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  +  LR  ++L    +  ++   G    D S +F   A     ++    ++L +
Sbjct: 172 HSYNKVFVSYLRTFERLGLRAI-PMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDM 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            +     +  + V G       +      ++ +      +   + S    RG+E      
Sbjct: 231 PVPPPSVDFDD-VAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFY 289

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +      P+      P            DG        +       +  + +  +     
Sbjct: 290 FGTKYSTPMKAVVTGP------------DGSERPVHMGSYGIGPSRLVAATIEASHDEAG 337

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               +      V +  +     +           L TAG+   ++    +  G +   AD
Sbjct: 338 IIWPDAIAPFDVALINLKVGDGACDTACAEIQAALETAGLSV-LYDDRDERPGAKFATAD 396

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               P  +I G    + G +++K  A G+  + +  + 
Sbjct: 397 LIGLPWQVIVGPKGLAEGKIELKRRASGERETLDPVDL 434


>gi|221118554|ref|XP_002154863.1| PREDICTED: similar to eukaryotic translation initiation factor 2
           alpha kinase 4 (predicted) [Hydra magnipapillata]
          Length = 1066

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/404 (13%), Positives = 131/404 (32%), Gaps = 43/404 (10%)

Query: 21  KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
           ++ RI   +   + NI++ +G   I+TP       L     + +     +  + D  G  
Sbjct: 484 QQARILQYVQSIMTNIFKKHGAVFIDTP------LLTPKGKNYENI-HNLACVLDPSGLQ 536

Query: 81  ISLRYDLTAPLARYVAENFDTIVFPCRTY--RIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
           + L  D     +R++  N    +              +           F          
Sbjct: 537 LCLPVDSRLSFSRFIIRNKINHIRRYCFSKLYKDFGIKGAHPVESWDCSFDIVSNSFSSF 596

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
             E         +     ++   + + +I +N+ K ++ I  + G   + +     I+  
Sbjct: 597 LPEAEIMYSVYEIIKEFPSL--TQRNLYIRLNHSKFIEAIFLQNGFSDEAQQEVYHILEH 654

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
            IDK  +  +                DF     L    I  ++  +    E S+ +  E 
Sbjct: 655 VIDKKQQNSM--------------LKDFFIYLGLPEHVITRLL--VCFTFEGSLAKAKES 698

Query: 259 V--------KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           +        + +   ++ F+E+  + + ++   +    + I ++++     Y+G +++ +
Sbjct: 699 LQLLCKSKAEVSTLAKQAFSEIEKLIKHLKNM-FVDIPVHICTSLIHNSNCYSGLIFQYV 757

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN----VPATGFSIGISRLIVALKSLE 366
                 + K K      +  GG YD  +             A G S+ +   + A +  +
Sbjct: 758 AEN---HRKNKYGRLDIIAVGGCYDKQIESLSKYAESTLPHAVGVSLEVEYFLHAARKDK 814

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
             + N       +I        +L+      + L   GI A ++
Sbjct: 815 IDSLNPHISNCGVIVCSLTSCTNLNSLVNVIRDLWAGGISAVLY 858


>gi|209885076|ref|YP_002288933.1| prolyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|226701315|sp|B6JH58|SYP_OLICO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|209873272|gb|ACI93068.1| prolyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 441

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 61/454 (13%), Positives = 120/454 (26%), Gaps = 64/454 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R      G   +  P L+ +D L +     D     +  +
Sbjct: 38  GIYAWLPLGFRVLKKIERIVREEQNRAGAIELLMPTLQLAD-LWRESGRYDAYGPEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D   + +       ++   + R   +++  +      Y I   FR+E+       +  +
Sbjct: 97  ADRHKRELLYGPTNEEMITEIFRSYVKSYRNLP--LNLYHIQWKFRDEQRPRFGVMRGRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S      A         +  +             R  L  I            
Sbjct: 155 FLMKDAYSFDLDEAAARLSYNKMFVAYLRTFA---------RMGLKAI------------ 193

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               ++   G    D S +F   A      +      L + +  
Sbjct: 194 -------------------PMRAETGPIGGDLSHEFIVLAETGESGVFCNKDVLDLPVPG 234

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK-ISSTIVRGLEYYTGCVYEA 309
              E  +         K + EL   +E V  +      +        RG+E      +  
Sbjct: 235 ---EDVDYDSDLTPIIKQWTELYAATEDVHDAARYETEVPAEKRVNTRGIEVGQIFYFGT 291

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                +      P         G Y   VSR  G  + A                     
Sbjct: 292 KYSDSMKALVVGPDGVEKPVHSGSYGVGVSRLVGAIIEACH------------DENGIKW 339

Query: 370 NNIKEMGPVLITTMDHDS-DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                   V I  +   + D+ +  +   + L   G+   ++  + +  G +   AD   
Sbjct: 340 PEAVAPFTVAILNLKQGASDTDAACEKLYRALTANGVDV-LYDDTDQRPGGKFATADLIG 398

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            P  I+ G    + G ++IK  A G       ++
Sbjct: 399 IPWQILIGPKGLAEGKVEIKCRADGSRELMSPED 432


>gi|297530568|ref|YP_003671843.1| prolyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297253820|gb|ADI27266.1| prolyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 567

 Score = 79.1 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 75/559 (13%), Positives = 148/559 (26%), Gaps = 102/559 (18%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++   IR      G   +  P L+ ++ L +           
Sbjct: 34  QSASGVYTFLPLGQRVLQKVEAIIREEMNRIGAMELFMPALQPAE-LWQQSGRWYSYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  L+D   +  +L     ++   + R   + +  +          +R     R      
Sbjct: 93  LMRLKDRHERDFALGPTHEEMITAIVRDEVKTYKRLPLVLYQIQTKFRDEKRPRFGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
             F             S +     M    A+     G+   ++   I +   + G     
Sbjct: 153 REFIMKDAYSFHTSKESLDETYNNMYEAYANIFRRCGL---NFRAVIADSGAIGGKDTHE 209

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   D   + +    A D      +  V     +       +  K A    + ID + S
Sbjct: 210 FMVLSDIGEDTIAYSDASDYAANIEMAPVVATYEKSDEP-PAELKKVATPGQKTIDEVTS 268

Query: 243 FLSIDLEKSM------------------HELYELVKGTIAGEKGFNELVVISELVRKSGY 284
           +L +  E+ +                        VK     +    EL    E  R    
Sbjct: 269 YLQVSPERCIKSLLFNVDGRYVLVLVRGDHEANEVKVKNVLDATVVELATPEETERVMNA 328

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP---VVFGSVGGGGRYDGLVSRF 341
               +                V   + G    NE+      V  G      +Y  L    
Sbjct: 329 PIGSLGPIGVNEDVTVIADHAVAAIVNGVCGANEEGYHYIGVNPGRDFAVSQYADLRFVK 388

Query: 342 KGQNVP-------------------------------------------ATGFSIGISRL 358
           +G   P                                              + IG+SRL
Sbjct: 389 EGDPSPDGKGTIRFARGIEVGHVFKLGTKYSEAMNAVYLDENGQTQTMIMGCYGIGVSRL 448

Query: 359 IVALKSL------ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           + A+              ++      L+T      +  +  + + + L  AG    ++  
Sbjct: 449 VAAIAEQFADEHGLVWPASVAPFHIHLLTANAKSDEQHALAEEWYEKLGQAGFEV-LYDD 507

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             +  G +   +D    PL +  G      G++++K    G+                  
Sbjct: 508 RPERAGVKFADSDLIGIPLRVTVGKR-AGEGVVEVKVRKTGE------------------ 548

Query: 473 QITIPISELVSTVKKILQE 491
              +P+SELV T +++LQ 
Sbjct: 549 TFDVPVSELVDTARRLLQS 567


>gi|221131812|ref|XP_002167156.1| PREDICTED: similar to Eukaryotic translation initiation factor
            2-alpha kinase 4 [Hydra magnipapillata]
          Length = 1475

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/446 (13%), Positives = 141/446 (31%), Gaps = 55/446 (12%)

Query: 21   KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
            ++ RI   +   + NI++ +G   I+TP       L     + +     +  + D  G  
Sbjct: 1010 QQARILQYVQSIMTNIFKKHGAVFIDTP------LLTPKGKNYENI-HNLACVLDPSGLQ 1062

Query: 81   ISLRYDLTAPLARYVAENFDTIVFPCRTY--RIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
            + L  D     +R++  N    +              +           F          
Sbjct: 1063 LCLPVDSRLSFSRFIIRNKINHIRRYCFSKLYKDFGIKGAHPVESWDCSFDIVSNSFSSF 1122

Query: 139  SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
              E         +     ++   + + +I +N+ K ++ I  + G   + +     I+  
Sbjct: 1123 LPEAEIMYSVYEIIKEFPSL--TQRNLYIRLNHSKFIEAIFLQNGFSKEAQQEVYHILEH 1180

Query: 199  AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
             IDK  +  +                DF    +L    I  ++  +    E S+ +  E 
Sbjct: 1181 VIDKKQQNSM--------------LKDFFIYLDLPEHVITRLL--VCFTFEGSLAKAKES 1224

Query: 259  V--------KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +        + +   ++ F+E+  + + ++   +    + I ++++     Y+G +++ +
Sbjct: 1225 LQILCKSKAEISTLAKQAFSEIEKLIKHLKNM-FVDIPVHICTSLIHNSNCYSGLIFQYV 1283

Query: 311  LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG----FSIGISRLIVALKSLE 366
            +       K K      +  GG YD  +   +             S+ +   + A +  +
Sbjct: 1284 VKN---QRKHKYRRLNILAVGGCYDKQIESLRKYAKSTLPHAVGVSLEVEYFLHAARKDK 1340

Query: 367  SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-LGSSKN--FGNQLKY 423
              + N       ++      S +L+      + L   GI A ++   S ++    +   Y
Sbjct: 1341 IKSLNSHISNCSVVVCSLTSSTNLNSLVNVIRDLWAGGISAVLYSYDSEQSYTIEDIQNY 1400

Query: 424  ADRRNCPLAI-----IQG----TGER 440
                N    +       G      E 
Sbjct: 1401 CKENNINHIVAIKDSFIGVQSREEEI 1426


>gi|218529196|ref|YP_002420012.1| prolyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|254782907|sp|B7KPK1|SYP_METC4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218521499|gb|ACK82084.1| prolyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 441

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/458 (11%), Positives = 120/458 (26%), Gaps = 55/458 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+ N++ D +R   +  G   I  P ++ +D L +     +  
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLNKVCDVVRAEQDRAGAIEILMPTIQAAD-LWRESGRYEAY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  L+D                                          E        
Sbjct: 90  GKEMLRLKDR--------------------------------------HERELLYGPTAE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + +         S +     +  +     + V  +           K             
Sbjct: 112 EVVTEIFRASTRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAAR 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  +  LR  ++L    +  ++   G    D S +F   A     ++    ++L +
Sbjct: 172 HSYNKVFVSYLRTFERLGLRAI-PMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDM 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            +     +  + V G       +      ++ +      +   + S    RG+E      
Sbjct: 231 PVPPPSVDFDD-VAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFY 289

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +      P+      P            DG        +       +  + +  +     
Sbjct: 290 FGTKYSTPMKAVVTGP------------DGSERPVHMGSYGIGPSRLVAATIEASHDEAG 337

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               +      V +  +     +           L TAG+   ++    +  G +   AD
Sbjct: 338 IIWPDAIAPFDVALINLKVGDGACDTACAEIQAALETAGLSV-LYDDRDERPGAKFATAD 396

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               P  +I G    + G +++K  A G+  + +  + 
Sbjct: 397 LIGLPWQVIVGPKGLAEGKIELKRRASGERETLDPVDL 434


>gi|237654037|ref|YP_002890351.1| ATP phosphoribosyltransferase regulatory subunit [Thauera sp. MZ1T]
 gi|237625284|gb|ACR01974.1| histidyl-tRNA synthetase 2 [Thauera sp. MZ1T]
          Length = 385

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 70/406 (17%), Positives = 125/406 (30%), Gaps = 53/406 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R  LP    D    +      +   + + +   G+  +  PLLEY DSL      +   
Sbjct: 1   MRWVLPDHIQDALPSDAHRLESLRRRLLDAFRLRGYQLVMPPLLEYLDSLTTGAGKDLEL 60

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               F L D   G+ + +R D+T  + R  A +        R    G V           
Sbjct: 61  R--TFKLVDQLSGRSMGVRADMTPQVTRIDA-HLLNRRGVSRLCYCGSVLHTLPSTLTGT 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+ +Q   +  G +   AD E+  ++A+ L    +  +   IG             +   
Sbjct: 118 REPLQLGAELYGHAGIEADVEILRLLAEVLRLAEVPASRIDIGHVGLFHALAARAGLVPG 177

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            +++L          D L    +  ++ +L +              L             
Sbjct: 178 REEEL---------FDLLQAKDVPELRRMLADVSEPARSALLALPEL------------- 215

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               + + E    +           EL  +++ +         +      +RG  Y++G 
Sbjct: 216 YGGPEVLAEAAARLPQDAEIAGPLAELRQLADAL-----GDLPVSFDLADLRGYHYHSGV 270

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+ A                 ++  GGRYD +   F  +  PATGFS         L   
Sbjct: 271 VFAAYGAESPA----------ALALGGRYDRVGQAFG-RARPATGFS---------LDLR 310

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           E + +      P        D D+    +     LR  G    + L
Sbjct: 311 ELAWHLPIPAAPAGAVLAPPDDDAGLASE--VSALRARGEIVMVAL 354


>gi|240137564|ref|YP_002962035.1| proline-tRNA ligase [Methylobacterium extorquens AM1]
 gi|240007532|gb|ACS38758.1| proline-tRNA ligase [Methylobacterium extorquens AM1]
          Length = 442

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/458 (11%), Positives = 120/458 (26%), Gaps = 55/458 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+ N++ D +R   +  G   I  P ++ +D L +     +  
Sbjct: 32  MIRQEAAGIYAWLPLGLRVLNKVCDVVRAEQDRAGAIEILMPTIQAAD-LWRESGRYEAY 90

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  L+D                                          E        
Sbjct: 91  GKEMLRLKDR--------------------------------------HERELLYGPTAE 112

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + +         S +     +  +     + V  +           K             
Sbjct: 113 EVVTEIFRASTRSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDIDQAAAR 172

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  +  LR  ++L    +  ++   G    D S +F   A     ++    ++L +
Sbjct: 173 HSYNKVFVSYLRTFERLGLRAI-PMRADTGPIGGDLSHEFIILAKTGESEVFCDQAYLDM 231

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            +     +  + V G       +      ++ +      +   + S    RG+E      
Sbjct: 232 PVPPPSVDFDD-VAGLQGVVDAWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFY 290

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +      P+      P            DG        +       +  + +  +     
Sbjct: 291 FGTKYSTPMKAVVTGP------------DGSERPVHMGSYGIGPSRLVAATIEASHDEAG 338

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               +      V +  +     +           L TAG+   ++    +  G +   AD
Sbjct: 339 IIWPDAIAPFDVALINLKVGDGACDTACAEIQAALETAGLSV-LYDDRDERPGAKFATAD 397

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               P  +I G    + G +++K  A G+  + +  + 
Sbjct: 398 LIGLPWQVIVGPKGLAEGKIELKRRASGERETLDPVDL 435


>gi|320093816|ref|ZP_08025661.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979249|gb|EFW10747.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 669

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 59/458 (12%), Positives = 118/458 (25%), Gaps = 79/458 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   ++  + D +R  +   GF  + TP +  ++              G+F  
Sbjct: 273 GLPVFHPKGGVLKRVMEDYVREAHIANGFQYVGTPHISKAELFHTS-GHLPYYADGMFPP 331

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            DD+GQ   L+           A N              P+        GR  + +    
Sbjct: 332 MDDEGQAYYLK-----------AMN-------------CPMHNLIFRSRGRSYRELPLRF 367

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
              G+      + +   +           + Y         +  +L  +     D   E 
Sbjct: 368 FEFGTVYRNEKSGVLQGLTRVRSITQDDSHSYCTPEQAPGEVRHLLTFVLTLLKDFGMED 427

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK-GANLTSEQIDIMVSFLSIDLEKSM 252
             +     ++      G K     G  +   D T+  A++ +E        +  D   + 
Sbjct: 428 FYL-----EVSTRDEDGAKKDKFIGSDEQWADATRILADIAAECAQENGLRVVDDPGGAA 482

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               ++        +   ++  I     +          +              + AI  
Sbjct: 483 FYGPKISVQAKDAIRRTWQMSTIQYDFNQPHRFGLEYTAADGARHEPVMIHSAKFGAIER 542

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F  +  +     F +                                             
Sbjct: 543 FIGVLTEHYAGAFPAWLA------------------------------------------ 560

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
               PV +  +   S      +     LR  GIR E  L   + FG +++ A +   P  
Sbjct: 561 ----PVQVRLVPVASAFDDYVEEVAAKLRERGIRVETDLSDDR-FGKKIRNAAKEKVPFT 615

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           +I G  +   G +  + L  G + +    +      AR
Sbjct: 616 LIAGGEDAEAGAVSFR-LRDGSQHNGIPVDRAVELIAR 652


>gi|161869758|ref|YP_001598925.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis 053442]
 gi|189028232|sp|A9M3P6|HISZ_NEIM0 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|161595311|gb|ABX72971.1| histidyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 383

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 135/409 (33%), Gaps = 51/409 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLLNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L    
Sbjct: 123 LQAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK        VK    +G    +                         
Sbjct: 181 SATLLALM---QDKDTGAVEAQVKAWKLDGMWAKAFSLLPRL---------------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +    A      EL  + +      +    I I  + +R   Y+TG +Y 
Sbjct: 223 REVLSDARGRLPDLSAVGGALGELQAVCD-----AFPDCEIHIDLSELRVDNYHTGLLYA 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E  
Sbjct: 278 AYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAIERQ 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         +  D++     +   + LR  G    +  G   N 
Sbjct: 327 P------------AVLVDAEDAEAAREAVEALREQGQCVVIDYGIGHNV 363


>gi|15676712|ref|NP_273856.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis MC58]
 gi|304387876|ref|ZP_07370050.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis ATCC 13091]
 gi|20978512|sp|Q9K013|HISZ_NEIMB RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|7226048|gb|AAF41227.1| histidyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|261392821|emb|CAX50402.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis 8013]
 gi|304338141|gb|EFM04277.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis ATCC 13091]
 gi|316984489|gb|EFV63457.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis H44/76]
 gi|325140035|gb|EGC62564.1| hypothetical protein NMBCU385_1318 [Neisseria meningitidis CU385]
 gi|325200503|gb|ADY95958.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
          Length = 383

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 134/409 (32%), Gaps = 51/409 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLLNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L    
Sbjct: 123 LQAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK        VK    +G    +                         
Sbjct: 181 SATLLALM---QDKDTGAVEAQVKAWKLDGMWAKAFSLLPRL---------------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +    A      EL  + +      +    I I  + +R   Y+TG +Y 
Sbjct: 223 REVLSDARGRLPDLSAVGGALGELQAVCD-----AFPDCEIHIDLSELRVDNYHTGLLYA 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E  
Sbjct: 278 AYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAIERQ 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         +  D++         + LR  G    +  G   N 
Sbjct: 327 P------------AVLVDAEDAEAAHEAVEALREQGQCVVIDYGIGHNV 363


>gi|302383072|ref|YP_003818895.1| prolyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193700|gb|ADL01272.1| prolyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 437

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 63/465 (13%), Positives = 137/465 (29%), Gaps = 67/465 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+ NRI   +R   E  G   +  P L+ +D L +     D  
Sbjct: 31  MIKQEAAGIYAWLPLGLRVLNRIEQIVREEQERAGAVELLMPTLQLAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  + D   + +       ++   + R   +++  +      + I   FR+E+    
Sbjct: 90  GPEMLRITDRHERELLYGPTNEEMITDIFRGFVKSYKALP--LNLFHIQWKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S      +         +  +             R  L  +     
Sbjct: 148 GVMRGREFLMKDAYSFDIDEASARRAYNRMFVAYLNTFA---------RMGLKAV----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI---DIM 240
                                      ++   G    D S +F   A+    Q+     +
Sbjct: 194 --------------------------PMRADTGPIGGDLSHEFIVLADTGESQVFCDKQL 227

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           V   +   +   ++L  +V G  +      E+         + + S          RG+E
Sbjct: 228 VEMPAPGADVDWNDLQAIVDGRTSLYAATEEMH------DAAQFESQTADGDRLTARGIE 281

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
                 +      P+  +   P    +    G Y   VSR  G  + A+    GI     
Sbjct: 282 VGHIFYFGTKYSAPMKAKVAGPDGQDTEVHMGSYGVGVSRLLGAIIEASHDDAGI----- 336

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                    + +     V+I    +D       +   + L  AG    ++  + +  G +
Sbjct: 337 ------IWPDAVAPFDVVVINLRANDPGVCEACEAAVEALEAAGKSV-LYDDTDERPGGK 389

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              AD    P  +  G    + G++++K  A G++ +  +     
Sbjct: 390 FATADLIGIPWQLTIGPKGVAEGVVELKRRASGEKSTLPLDQAME 434


>gi|162329642|ref|YP_469149.2| prolyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|114152238|sp|Q2K9R4|SYP_RHIEC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 440

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 63/455 (13%), Positives = 128/455 (28%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR      G   +  P L+ ++ L +     D   K +  +
Sbjct: 38  GIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMPTLQSAE-LWQESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEKHGPGRFR 126
           +D   + +       ++   + R   +++  +       +         R        F 
Sbjct: 97  KDRQDRPMLYGPTNEEMVTDIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFM 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D     AE +  +M      T E +G               L  I        
Sbjct: 157 MKDAYSFDLTREGAEHSYNKMFAAYLRTFERLG---------------LRAI-------- 193

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                                   ++   G    + S +F   A+    ++     F+  
Sbjct: 194 -----------------------PMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGF 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D+    +  ++ V+G  A    +  L   +  +      +   +      RG+E      
Sbjct: 231 DIPGE-NTDFDSVEGLKAIFDKWTSLYAATSEMHDEAAFNAVPEGDRLSARGIEVGHIFY 289

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +      P+  + Q P         G Y         + VPA   +      I+      
Sbjct: 290 FGTKYSEPMGAKVQGPDGKEHFVHMGSY----GIGPTRLVPAIIEASHDDNGII------ 339

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++     V+I     D       ++    L+ AG          +  G +   AD 
Sbjct: 340 -WPASVAPFDVVVINMKVGDQACDDTCELIYAALKKAGKDVLYDDTDDRA-GTKFATADL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P+ II G    + G +++KD   G   +  I+
Sbjct: 398 IGVPVQIIAGPRAVANGEVEVKDRKTGARETMTIE 432


>gi|115748985|ref|XP_785160.2| PREDICTED: similar to Eukaryotic translation initiation factor
            2-alpha kinase 4 (GCN2-like protein) [Strongylocentrotus
            purpuratus]
 gi|115954900|ref|XP_001198179.1| PREDICTED: similar to Eukaryotic translation initiation factor
            2-alpha kinase 4 (GCN2-like protein) [Strongylocentrotus
            purpuratus]
          Length = 1605

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 60/422 (14%), Positives = 125/422 (29%), Gaps = 53/422 (12%)

Query: 26   RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRY 85
            +  + D+++ I++ +G   I T +L       K     D          D  G  ++L Y
Sbjct: 1114 QQMVYDTVQRIFQKHGAVRINTIMLLPK---TKLYEHSDMCA----HFMDHSGGIVTLPY 1166

Query: 86   DLTAPLARYVAENF--DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETA 143
            DL  P ARY+A N   +   +                       F            +  
Sbjct: 1167 DLRVPFARYIARNNVTNLKRYSIERVYRERKLFGSHPRELTECAFDIVTNSPGSLQPDAE 1226

Query: 144  DAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL 203
               +   + +    +  +  +Y I +N+  +L  IL   G+  +   +    +       
Sbjct: 1227 VLHLVTEIINEFPEL--QARNYSIRLNHTGLLTAILNYCGVPEELHGSLYRTL------- 1277

Query: 204  DKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTI 263
                    K          +     G + T +Q+                      +   
Sbjct: 1278 -------NKARTERLTKVQTQTRLCGMSFTEQQV------------------RGQGQNAS 1312

Query: 264  AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPV 323
              +   +EL VI    +  G     + I+  +V  ++ ++G V++ +     +   +K  
Sbjct: 1313 MVKFALHELEVIISQAQVYGVRL-EMLINVGLVYNIQIFSGVVFQFVA---SIGRPKKRP 1368

Query: 324  VFGSVGGGGRYD------GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
                +  GGRYD            +          I +S   +    L+ S ++I     
Sbjct: 1369 TMDVLAAGGRYDILIPEFKKPHSTQQNVPGPLAVGISVSFEKIITAVLQESQSDITLSIC 1428

Query: 378  VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             ++      S  +       + L  AG +A++    S +      Y         +I   
Sbjct: 1429 DILVVSVGSSTLIRDRIKVVRNLWAAGFQADVLYDDSLSLEEAQDYCRAMGISHLVILKD 1488

Query: 438  GE 439
             +
Sbjct: 1489 SD 1490


>gi|14521542|ref|NP_127018.1| threonyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|14548274|sp|Q9UZ14|SYT_PYRAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|5458761|emb|CAB50248.1| thrS threonyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 625

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 101/366 (27%), Gaps = 26/366 (7%)

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           ++  E     ++          V S  +       +  A       IK++      N   
Sbjct: 262 MYDFEHPALEKYLNRFPARQYIVLSGDKRY----FLRFAACFGQFMIKKDAIISYRNLPL 317

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQ---GVKLLLGEGRTDNSGDFTKGA 230
            +  +               L  LRA    D   L           + +   S +  +G 
Sbjct: 318 RMYELTRYSFRREKRGELSGLRRLRAFTMPDMHTLAKDIEQAKEEFKKQFKLSMEVLEGV 377

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVK--GTIAGEKGFNELVVISELVRKSGYNSNR 288
            LT E  ++ + F     ++    + ELVK  G     + + +      L  +  +  N 
Sbjct: 378 GLTPEDYEVAIRFTEDFWKEHKDFIVELVKLIGKPVLIEMWKQRFFYFILKFEFNFVDNL 437

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
            K ++     ++      +          EK   +                     +   
Sbjct: 438 DKAAALSTVQIDVENAERFGITYYDENGEEKYPLI----------------LHCSPSGAI 481

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
                 I      L +          + P+ +  +    + L         L  A IR +
Sbjct: 482 ERVMYAILEKQAKLMNEGKKPMFPLWLSPIQVRVIPVSEEYLDYALYVAGKLEGAKIRVD 541

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +     +    +++ A++   P  ++ G  E+  G + ++    GK+    I+      +
Sbjct: 542 VD-DEDERLNKKIRRAEKEWIPYIVVVGAREKENGTITVRRREDGKQYETRIEELIKEIK 600

Query: 469 ARVAQI 474
            +    
Sbjct: 601 EKTEGF 606


>gi|323139097|ref|ZP_08074155.1| prolyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322395661|gb|EFX98204.1| prolyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 447

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/464 (12%), Positives = 117/464 (25%), Gaps = 61/464 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N I   IR      G      P ++ +D L +     D   K +  +
Sbjct: 38  GIYAWLPLGLKVLNNITRIIREEQNRAGAIECLMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D   + +       ++   + R    ++  +      Y I   FR+E        +  +
Sbjct: 97  TDRHDREMLFGPTNEEMITEIFRAYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S   TA               G    +       R      L  I +  +   
Sbjct: 155 FLMKDAYSFDLTA-------------EAGRHSYNRMFVAYLRTFARMGLTAIPMAAES-G 200

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                +      L + G   V         D        AN+  +    +          
Sbjct: 201 PIGGNLSHEFIILAETGESEV-----FCHKDFLSFAPPPANVDFDDAPAL---------- 245

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                 E+V    +     +E+   +             + S    RG+E      +   
Sbjct: 246 -----EEIVGKWTSRYAATSEMHDAAAY-------EAVPEASRVSARGIEVGHIFYFGTK 293

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              P+      P     V   G Y                  +  + +            
Sbjct: 294 YSEPMKAVVNGPDGKEVVVQMGSY------------GIGPSRLVAAIIEAGHDEAGIVWP 341

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                  V +  +     +  +      Q L  AG+   +     +  G +    D    
Sbjct: 342 EQVAPFHVGVADLKVGDANTGRVCGDLVQQLENAGLDV-LHDDRDERPGAKFATLDLIGL 400

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           P  I+ G    + G +++K    G+      ++  +     V Q
Sbjct: 401 PWQILVGPKGLAEGRVEVKRRRTGERELLSPEDVVARIVEAVKQ 444


>gi|283856263|ref|YP_162195.2| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|292495061|sp|P75000|SYP_ZYMMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|283775258|gb|AAV89084.2| prolyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 443

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/476 (11%), Positives = 124/476 (26%), Gaps = 71/476 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  RI   IR      G   +  P L+ +D L +     D  
Sbjct: 31  MIRQTAAGIYAWLPLGLRVLRRIEKIIREEQARAGALELLMPTLQTAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   + +       ++   L R   +++  +       +             
Sbjct: 90  GPEMLRIKDRHNRELLYGPTNEEMITALIRDNLQSYRDLPRIFYHIQWKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR-KILDGI 178
                F        D   ++       M +   ++   +G++              L   
Sbjct: 150 MRGREFLMKDAYSFDIDETAGRHNYNRMFVAYLNSFSRLGLRAIPMQADTGPIGGDLSHE 209

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
              +  +G+  +                                            EQ  
Sbjct: 210 FIVLAPNGESDVFYHSNW--------------------------------------EQPT 231

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             +     D +     + + +    A ++  + L       +        +         
Sbjct: 232 RHIEADFDDPKALQSIVNDHISDYAATDEKRDPLREAQAGDKLRQSRGIEVGHIFFFGTK 291

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
                G         P  + K  P+  GS G G             +     +   ++  
Sbjct: 292 YSKPMG------FTLPGPDGKPIPIQMGSYGIGISRLLGAIIEASHDDNGIIWPEAVAPY 345

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            V L +L     N + +           +DSL +           GI       + +  G
Sbjct: 346 HVGLINLRIDDENCRAI-----------ADSLYQRLEAA------GIDTLYDDRNERG-G 387

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +    D    P  ++ G     +G++++K+ A G++ +  ++N  +   A   Q 
Sbjct: 388 AKFATMDLIGLPWQVVIGPKGAEKGVVELKNRANGEKQTISVENAFNLLTAGHQQR 443


>gi|145601757|ref|XP_363059.2| hypothetical protein MGG_08643 [Magnaporthe oryzae 70-15]
 gi|145010267|gb|EDJ94923.1| hypothetical protein MGG_08643 [Magnaporthe oryzae 70-15]
          Length = 1684

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 65/472 (13%), Positives = 144/472 (30%), Gaps = 43/472 (9%)

Query: 19   PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
               E+       +++  ++  +G   +         S+  F P      +    + D  G
Sbjct: 1036 SPAELMRLLVTEETLTAVFRRHGAVKV---------SISPFYPPSAHYTQNTVEVVDKHG 1086

Query: 79   QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ---FIQCDVDN 135
              + L YDLT   AR +A++        R+Y  G VFR+   G               ++
Sbjct: 1087 ALLQLPYDLTMGSARALAKSTSRDTVVQRSYSFGRVFRDRPSGGQPQMFGEVHFDVVSED 1146

Query: 136  VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
                A      + ++     E   + R+     + +  +L  I +  G+       E+  
Sbjct: 1147 ASDLALKEAEAIKVLDEIIAEFPTLSRSQMCFHLGHSDLLRCIFDYCGV-------EKAS 1199

Query: 196  VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS---- 251
                 D L K  ++GV             +    A++++  +D +  F   +        
Sbjct: 1200 RRAVADTLSKLNIRGV------TWQKIKSELRTTASISTTTLDELQKFDFRENPGKAANQ 1253

Query: 252  MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +  +++    +    +    L  + E  +K G  +            + +    ++  + 
Sbjct: 1254 LRTIFQKTDVSQQVSQPLAHLKEVWEYCKKLGVRTKIYVAPLWSWNEVFFSGNMMFACLF 1313

Query: 312  GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES---- 367
                         + S+    R     S F+ ++    G +      + A  S +     
Sbjct: 1314 DKRSREVLAAGGRYDSLIKEHRPRISGSHFQERHAVGFGMNWEQLAHVSAKSSKKRAGAA 1373

Query: 368  -STNNIKEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                N+       +     D   L +      Q L   GI AE+    +++    L+   
Sbjct: 1374 DEETNLFATKRCDVLIASFDPSLLRTTGLELLQTLWAHGISAELA-RDARSPEEVLQAQR 1432

Query: 426  RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI--KNNESWREARVAQIT 475
                   +I       + ML+IK   + +    ++       W  A + +  
Sbjct: 1433 EDGHNWVVIV-----KQDMLKIKTPGRREAPDADVLPGQLVQWLRAEMRERE 1479


>gi|20981700|sp|Q02147|HISZ_LACLA RecName: Full=ATP phosphoribosyltransferase regulatory subunit
          Length = 328

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 131/363 (36%), Gaps = 51/363 (14%)

Query: 18  CPTKEIRI--------RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
              +E             +I   +R ++    +  +  P  EY+        +    N+ 
Sbjct: 7   LLPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQE 66

Query: 70  -VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F     +GQ I+LRYD T PL R  ++         R    G +FR EK   GR  + 
Sbjct: 67  KMFQFIKHEGQSITLRYDFTLPLVRLYSQ--IKDSTSARYSYFGKIFRKEKRHKGRSTEN 124

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++  G SA+ ++ E+  +    +E +G+ +  + IG           +++    D 
Sbjct: 125 YQIGIELFGESADKSELEILSLALQVIEQLGLNKTVFEIGSA------KFFQRLCQLADG 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                  +L   D      L G+   + +                + ++  + + ++   
Sbjct: 179 STELLTELLLKKD------LSGLNAFIEKNNFSKELRGLLKEIFITNELSRLENLVTNTK 232

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +  +   ++ +K          E      +++        I I   +V  ++YYT  +++
Sbjct: 233 DDVLISSFDQLK----------EFSEKLSMIK-------PIIIDLGMVPKMDYYTDLMFK 275

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                  +  GGRYD L+S F+ +   A GF   +  ++ AL+  E  
Sbjct: 276 AYSSAANQ----------PILSGGRYDQLLSNFQ-EEAFAIGFCCHMDTILKALERQELE 324

Query: 369 TNN 371
            +N
Sbjct: 325 EDN 327


>gi|46121513|ref|XP_385311.1| hypothetical protein FG05135.1 [Gibberella zeae PH-1]
          Length = 1698

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 70/480 (14%), Positives = 147/480 (30%), Gaps = 60/480 (12%)

Query: 19   PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
              +E+  +  +   + +I+  +G   +ETP        G   P           L D +G
Sbjct: 1022 SPQELLNQGLVKQELVSIFRRHGA--LETPR-------GIIYPKSTHYGDNAVQLLDPNG 1072

Query: 79   QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
              + L YDLT   AR +A+  +  V              +  G       +  D+    +
Sbjct: 1073 NVLQLPYDLTLGNARIMAKQTNGPVVQRTFTFGNVFRDKQDMGQPLMFGEVDFDIVTTDT 1132

Query: 139  SAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
                      + + D +       +       + +  +L  I E  G+    +     ++
Sbjct: 1133 LDLALKEAEVLKVIDEIIHTFPSLSTTAMCFHLGHSDLLHLIFEHCGIEPASRSGAADVL 1192

Query: 197  LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHEL 255
             R    +  +  Q +++ L           +    +++  +D +  F   D   K+  +L
Sbjct: 1193 SRL--NIHNYTWQKIRIELR----------SPTVGVSATSVDELQKFDFRDTPNKTFAKL 1240

Query: 256  YELVKGTIAGEKG---FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
              L +G+   ++       L  + E  +     +         ++   Y  G ++  +  
Sbjct: 1241 KTLFEGSDMYQRASPTIAHLKEVVEYCKHLSVGTKVYINPLNSLKEAFYTGGVLFSCLYD 1300

Query: 313  FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA----------- 361
              V +             GGRYD L+   + +     G    +   +             
Sbjct: 1301 KKVKD---------VFAAGGRYDQLIKEHRPKVGSQFGERHAVGFSLAWERLAKPPKSGG 1351

Query: 362  ---LKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
               LK  E  +N+I             D+    S      Q L    I AEM    +++ 
Sbjct: 1352 RPFLKKAEDESNSIFNTRRCDCLVASFDAAVLRSSGVEILQTLWAHDISAEMA-KDARSP 1410

Query: 418  GNQL-KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI--KNNESWREARVAQI 474
             + + K+ D       II          L+IK + +      ++      +W    + + 
Sbjct: 1411 EDLMSKHRDET-YSWIIIIKQDSI----LKIKSMGRKDVPDADMPSTQLLAWLRNEIRER 1465


>gi|327194827|gb|EGE61661.1| prolyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 440

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 59/448 (13%), Positives = 119/448 (26%), Gaps = 53/448 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR      G   +  P L+ ++ L +     D   K +  +
Sbjct: 38  GIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMPTLQSAE-LWQESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D        R  L                                       + +    
Sbjct: 97  NDRQE-----RPML---------------------------------YGPTNEEMVTDIF 118

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            +   S +     +  +     + +  +           K                    
Sbjct: 119 RSSVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMF 178

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              LR  D+L    +  ++   G    + S +F   A+    ++     F+  D+     
Sbjct: 179 AAYLRTFDRLGLRAI-PMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVDFDIPGEST 237

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  + V+G  A    +  L   +  +      +   +      RG+E      +      
Sbjct: 238 DF-DSVEGLQAIFDKWTSLYAATSEMHDEAAFNAVPEGERLSARGIEVGHIFYFGTKYSE 296

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P+  + Q P         G Y         + VPA   +      I+          ++ 
Sbjct: 297 PMGAKVQGPDGKEHFVHMGSY----GIGPTRLVPAIIEASHDDNGII-------WPASVA 345

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I     D       ++    L  AG          +  G +   AD    P+ I
Sbjct: 346 PFDVVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRA-GTKFATADLIGVPVQI 404

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           I G    + G +++KD   G   +  I+
Sbjct: 405 IAGPRAVANGEVEVKDRKTGARETMTIE 432


>gi|116335075|ref|YP_802570.1| histidyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
 gi|116235356|dbj|BAF35204.1| histidyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
          Length = 354

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 7/151 (4%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           + RGF D    E   +  I++ IRN+Y    +  IETP+LE  +   K     +     +
Sbjct: 3   ILRGFKDLLFYEKSKKTTIINFIRNVYLKKKYFEIETPILEKFEIFNKK---NNLFINEI 59

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +   +   + I LR + T    R +           + + IG +FR EK    + RQF Q
Sbjct: 60  YKFYNYSKKLICLRPENTTNCTRILI----KYNKIIKVFYIGSMFRYEKPQLNKIRQFTQ 115

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
              +   +        + +     L     K
Sbjct: 116 FGFELYNNKISEELNSIKLTNKVLLLHNNYK 146


>gi|13235461|emb|CAC33692.1| Histidyl-tRNA synthetase [Rickettsia rickettsii]
          Length = 253

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 85/256 (33%), Gaps = 25/256 (9%)

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT--IAGEKGFNEL 272
           L E   D     ++ + +   +  + +     + ++ +     ++        ++ F EL
Sbjct: 20  LVEYLNDFKEQLSEESKIRLSKNPMRILDSKSETDQKIIANAPVLSEYYTDESKEYFEEL 79

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
           +   +++        +  I+  +VRGL+YY    +E            K     ++  GG
Sbjct: 80  IQYLDIL------GVKYSINPRLVRGLDYYCHTAFEFTTK--------KLGSQSTILAGG 125

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           RYDGL       +             I  ++  + S           +  +    +++  
Sbjct: 126 RYDGLAKIMGNNDDVPAIGFAAGIERIALMREYDVSEVKP-------VFVLPIGKNNICY 178

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  LRT  I   +   S      +++     N    I  G  E++   L+IKDL K
Sbjct: 179 ALEIVDKLRTENIAIII--ESLGKIAKRMQRIFNENAQFIIFIGDEEQANNNLKIKDLKK 236

Query: 453 GKELSREIKNNESWRE 468
            +E   +        +
Sbjct: 237 EEEYIVDFAKALELLK 252


>gi|170742529|ref|YP_001771184.1| prolyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|226701312|sp|B0ULM2|SYP_METS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|168196803|gb|ACA18750.1| prolyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 444

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/470 (10%), Positives = 114/470 (24%), Gaps = 61/470 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+ NR+++ IR   +  G   +  P ++ ++ L +     +  
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLNRVVEVIRAEQDRSGAIELLMPTIQSAE-LWRESGRYEAY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  ++D                                          E        
Sbjct: 90  GKEMLRIRDR--------------------------------------HEREMLFGPTNE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + I     +   S +     +  +     + V  +           K             
Sbjct: 112 EMITAIFRSAVRSYKDLPKSLYHIQWKFRDEVRPRFGTMRSREFLMKDAYSFDLDEAGAR 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI---DIMVSF 243
                  +  LR   +L    +  ++   G    + S +F   A     ++      + F
Sbjct: 172 HAYNKMFVAYLRTFARLGLKAI-PMRAETGPIGGNLSHEFIILAQTGESEVYCDRAYLDF 230

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                     ++  L          +     + E  R +              RG+E   
Sbjct: 231 PIPPGSTDFDDVAALQATVDHWTSRYAATSEMHEPERFAAVPEEA----RMAARGIEVGH 286

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +      P+      P         G Y                  +  + +  +  
Sbjct: 287 IFYFGTKYSEPMGARVTGPDGQERPVHMGSY------------GIGPSRLVAAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                  +      V +  +     +         + L  AG+   ++    +  G +  
Sbjct: 335 EAGIVWPDAVAPFDVGLLNLKTGDIATDAACARIQEQLEAAGLSV-LYDDRDERPGAKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            AD    P  +I G    + G +++K  A G+  +       +      A
Sbjct: 394 TADLIGLPWQVIVGPKGLAEGQVELKRRATGERETVAPDALAARLRRGAA 443


>gi|313637683|gb|EFS03062.1| threonyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 483

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 65/459 (14%), Positives = 132/459 (28%), Gaps = 81/459 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 104 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 162

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E               
Sbjct: 163 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAEL-------------G 202

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 203 MMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDIKDY 259

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   D E + +
Sbjct: 260 SFRLSYRDPKNT----------EKYFDDDAMWDKAQAMLKSAMDEMGMDYFEADGEAAFY 309

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++   I       R +  + G V   +  F
Sbjct: 310 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRG-VVSTMERF 368

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                +A   +E    N  
Sbjct: 369 VAYLIEEYKGAFPTW-------------------------------LAPVQMELIPVNAD 397

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                           L   +     L+ AG+R E+    ++  G +++ A  +  P A+
Sbjct: 398 AH--------------LDYAKGVQDKLQRAGLRVEVD-DRNEKLGYKIREAQTKKIPYAL 442

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E   G + ++        + E+    S     V+
Sbjct: 443 VLGDQEMESGTVNVRRYGSKDSETMELDTFISQVVQEVS 481


>gi|150396141|ref|YP_001326608.1| prolyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166980159|sp|A6U7Z3|SYP_SINMW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150027656|gb|ABR59773.1| prolyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 442

 Score = 78.7 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/451 (12%), Positives = 121/451 (26%), Gaps = 59/451 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR      G   +  P L+ ++ L +     D   K +  +
Sbjct: 38  GIYTWLPLGKRVLDKVNAVIREEQNRSGAIELLMPTLQSAE-LWQESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D   + +       ++   + R   +++  +                            
Sbjct: 97  KDRQDRPMLYGPTNEEMITDIFRSYVKSYRNLPL-------------------------- 130

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                           +  +     + +  +           K                 
Sbjct: 131 ---------------NLYHIQLKFRDEIRPRFGTMRSREFLMKDAYSFDLDRAGAEHAYK 175

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                 LR  D+L    +  ++   G    + S +F   A+    ++     FL  D+  
Sbjct: 176 RMFAAYLRTFDRLGLRAI-PMRADTGPIGGNLSHEFIILADTGESEVFCHKDFLGFDIPG 234

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                 ++       EK  +     SE+  ++ +++   +      RG+E      +   
Sbjct: 235 EDTNFDDVASMNAIFEKWTSRYAATSEMHEEAAFDAIP-EGERLSARGIEVGHIFYFGTK 293

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
               +  +   P         G Y         + VPA   +      I+          
Sbjct: 294 YSEAMGAKVLGPDGKEHTVHMGSY----GIGPTRLVPAIIEASHDDNGII-------WPK 342

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
            I     V+I     D    +        L  AG    +     +  G     AD    P
Sbjct: 343 GIAPFDIVVINMKTGDDACDTACGRLYSDLGKAGFDVLLDDTDERAGGK-FATADIIGVP 401

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           + +I G    + G +++KD   G   +  ++
Sbjct: 402 VQVIVGPRSIANGEVEVKDRKTGARETMTVE 432


>gi|313672947|ref|YP_004051058.1| prolyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939703|gb|ADR18895.1| prolyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 572

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 62/533 (11%), Positives = 144/533 (27%), Gaps = 75/533 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     +R+  ++ + IR      G   I  P +  ++ L K     +  
Sbjct: 31  MIRKVAAGIYNYLPMGLRVIRKVENIIRKYMNEAGAIEILMPAVVPAE-LWKESGRWNVY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
            K +   +D   +   +     ++   + R   +++  +          +R     R   
Sbjct: 90  GKELLRFKDRHDRDFCMGPTHEEVVTDIVRNEIKSYKDLPVNLYQIQTKFRDEVRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK------------------ 161
                F        D     AE +   M        E+ G+K                  
Sbjct: 150 MRGREFIMKDAYSFDVDDEGAEKSYGLMRDAYCKIFESCGLKYKVVEADSGAIGGNFSHE 209

Query: 162 -------RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL 214
                    D+ I  ++      + +   +   ++ +E    +  I+  ++  ++ V   
Sbjct: 210 FMVTAETGEDFVISCDSCDYAANVEKAPVIDNFEEDDEVEKPIEKIETKNQKTVEEVAKF 269

Query: 215 LGEGRTDNSGDFTKGANLT----------SEQIDIMVSFLSIDLEKSMHELYELVKGT-- 262
           L              A                +  + +FL+    +      E+VK T  
Sbjct: 270 LNVETKKVVKTMILKAGDEIVAVMIRGDHELNLAKIKNFLNAPFVE-FATPEEIVKATNG 328

Query: 263 ------IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVM 316
                   G           + ++      N   I    V     +    +   +     
Sbjct: 329 PLGFSGPIGINVKIYADNAVKKLKNYVVGGNEKDIHLINVNHTRDFKVTAFSDFINAKPG 388

Query: 317 NEKQKPVV----------FGSVGGGGRYDGLVSRFK------GQNVPATGFSIGISRLIV 360
           ++  K                   G +Y   ++          Q +    + IG+ R   
Sbjct: 389 DKCPKCGGTYVITKGIEVGHIFKLGTKYSKSMNATYLDKDGKQQYIVMGCYGIGVGRTAA 448

Query: 361 ALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           A                I     V+I     D D ++  +   + L    +   +   + 
Sbjct: 449 AAIEQNHDEKGIIWPIQIAPFEVVIIPINTDDEDVVNLSETLYKKLLKKNVEVIIDDRNE 508

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           +  G +   AD    P+ +  G      G ++I     G +++ +  +  S  
Sbjct: 509 RA-GVKFNDADLVGYPIRVNIGKKTLENGEVEIVIRKTGDKINCKKDDALSEI 560


>gi|241998944|ref|XP_002434115.1| histidyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215495874|gb|EEC05515.1| histidyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 441

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 86/443 (19%), Positives = 155/443 (34%), Gaps = 38/443 (8%)

Query: 12  PRGFADCPT--KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           P+G        +   +  R+  ++  I   +G  P+  P L     L K   ++D     
Sbjct: 2   PKG----HPLLQSALLFRRVRAALERILCRHGAAPLAIPTL-----LPKNPEEDD---SW 49

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           V+   D  G  ISL +D+  P ARYVA   D      R Y I  V+R+ K      R+  
Sbjct: 50  VY-FMDHGGLIISLPHDMRVPFARYVARCNDACP--LRRYAIEKVYRSRKVFGCHPRELH 106

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           +C  D V ++ ++A A    ++    E V         G + R    G+L+ + ++    
Sbjct: 107 ECAFDIVSNNQQSALANCAEVLHLANEVVTEFSELQSRGYSVRLGHTGLLQSLLMYCSVS 166

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
            +    V  A+          ++  L      +S      A     Q   +   L     
Sbjct: 167 EDNWPRVYAALRGAQCSSKTQLQQEL------DSLSLGDQAVALLAQFCEVEDCLQKVSS 220

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                + +      + ++  +EL  + EL     ++   + I   +V     Y+G V+E 
Sbjct: 221 MYRFVVRQKTPAAASAKQALHELEGLIELCSVFAFHL-PMSIVPCLVCDEHLYSGIVFEV 279

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF----KGQNVPATGFSIGISRLIVALKSL 365
           +       +K +      +  GGRYD LVS F       N  A G S  I +++ AL   
Sbjct: 280 VCQ---SRKKTRRQGRDVLAVGGRYDKLVSSFAVAGATANFVAVGISFAIEKIVQALAEE 336

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +    +    VL +  D       +  +  + L    I A +      +  +      
Sbjct: 337 GDAPCLAE---CVLGSAGDAQPALRHQQLVLLERLWAMDIPALVSPQEGTDEASSF--CR 391

Query: 426 RRNCPLAIIQGTGERSRGMLQIK 448
               P   +    E  +G  +++
Sbjct: 392 EHKIPHLALLRDSE--QGYARLR 412


>gi|289192307|ref|YP_003458248.1| threonyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938757|gb|ADC69512.1| threonyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 620

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 60/471 (12%), Positives = 144/471 (30%), Gaps = 95/471 (20%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDD 76
              K   IR+ + D + N+  + G  P+ETP++   D   K + +  D+  +  +  +  
Sbjct: 221 WYPKGKLIRDLLADYVYNLVVSMGAMPVETPIM--YDLGNKAIREHADKFGERQYRFR-Q 277

Query: 77  DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             + + LR+                                                   
Sbjct: 278 GNRELMLRF--------------------------------------------------A 287

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
               +    +   ++   L     + + Y      R  L G+         D     L +
Sbjct: 288 ACFGQFMMKKDMYLLPRYLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDMHTVCLNL 347

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELY 256
            +A+++ +K   + +K                  NL+      +  F     ++     +
Sbjct: 348 EQAMEEFEKQFWECLK-------------TGDDLNLSYSV---IFRFTKDFFDEHRDWFF 391

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVM 316
           ++ K   + + G + ++ I    +        I +  ++ R +E  T       +   V 
Sbjct: 392 KIAKEYKS-KYGKDVILEILPKRKHYWVGKVDIAVIDSLGRPIENPT-------VQIDVE 443

Query: 317 NEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG 376
           + K+  +       G  Y  ++      ++      +     I A     ++      + 
Sbjct: 444 SAKRFDIKVH-TNEGEVYPIILHCSPTGSIERVLCGLLEKAAIEA--KEGNAPMLPVWLS 500

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P+ +  +              + LR + IRA+      ++   +++ A +   P  ++ G
Sbjct: 501 PIQVRVIPVAERHYDYALKVAEKLRESNIRADFD-DREESVSKKIRNAGKEWIPYVVVVG 559

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             E   G L +            I+   + ++    ++T+   EL+  VKK
Sbjct: 560 DEEMESGKLTV-----------TIREKSTLKKPYKEKMTV--DELIERVKK 597


>gi|195953061|ref|YP_002121351.1| prolyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|226701299|sp|B4U8B2|SYP_HYDS0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|195932673|gb|ACG57373.1| prolyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 565

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 75/561 (13%), Positives = 151/561 (26%), Gaps = 90/561 (16%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K   ++ ++  G  +      R+  +I + +R+  +  G   +   +L  ++ L K   
Sbjct: 27  TKAGFIK-QVASGIYELTPIAFRVLKKIENIVRDEMDKAGAQELLLTILNPAE-LWKETG 84

Query: 62  DEDRPNKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
             D     +F L+D   +   L         DL     R   +    +      +R    
Sbjct: 85  RWDYYGNELFKLKDRSDRDYCLGPTHEEEITDLVRKTVRSYKQLPLNLYQIHTKFRDEKR 144

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
            R        F        D    SA+ +   M     +  + + +        +     
Sbjct: 145 PRYGLIRGREFIMKDAYSFDTDEESAKNSYDIMVKAYKNIFKRLNLNILMVKADVGQIGG 204

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQG---------VKLLLGEGRTDNSGD 225
                        + L             +   L+          V   +         +
Sbjct: 205 KSSHEFVAITKYGEALIAYCENCGYAANTEIVELKKPNVEKEPPLVLEEVYTPNIKTIEE 264

Query: 226 FTKGANLTSEQIDIMVSFLSID--------LEKSMHELY--ELVKGTIAGEKGFNELVVI 275
            +   N+   +I   V ++  D         +K + E     L           +E++ +
Sbjct: 265 LSSFLNVAKSKIIKSVLYIKEDKPIMVLIRGDKKIDEKKLERLFGTDEFRLAEDDEVLRL 324

Query: 276 SE-----------------LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
                              +V  S YN++ + ++              +E  +    + E
Sbjct: 325 LNTEKGFIGPFVEGKDIEIIVDNSLYNASNMVVAFNKPHYHYKNANIDFENFVDVAQVEE 384

Query: 319 KQKPVV-------------FGSVGGGGRYDGLVSRFKGQ------NVPATGFSIGISRLI 359
                                +   G RY   +  F          V    + IGISRLI
Sbjct: 385 NDPCPECGSPLKVAQGLELGHTFLLGTRYSLPMKAFFTDKDGVEKPVVMGCYGIGISRLI 444

Query: 360 VALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
            AL               +     ++      D    S  +   + L   GI   +F   
Sbjct: 445 AALVEQYHDEKGIKWPLPVAPFQVLISCVNTSDDIQYSTSEHLYKSLTQEGIEV-LFDDR 503

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             + G +   AD    P  I+ G      G++++ D                     +  
Sbjct: 504 DVSPGVKFNDADLIGIPYRIVVGKK-AKDGLVEVVDRHT------------------LKA 544

Query: 474 ITIPISELVSTVKKILQENKE 494
           + +PI +++  +K IL  N  
Sbjct: 545 VDVPIDKVLDYIKDILNVNGR 565


>gi|313633110|gb|EFS00008.1| threonyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 485

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 65/459 (14%), Positives = 132/459 (28%), Gaps = 81/459 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 106 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 164

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E               
Sbjct: 165 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAEL-------------G 204

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 205 MMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDIKDY 261

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   D E + +
Sbjct: 262 SFRLSYRDPKNT----------EKYFDDDAMWDKAQAMLKSAMDEMGMDYFEADGEAAFY 311

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++   I       R +  + G V   +  F
Sbjct: 312 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRG-VVSTMERF 370

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                +A   +E    N  
Sbjct: 371 VAYLIEEYKGAFPTW-------------------------------LAPVQMELIPVNAD 399

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                           L   +     L+ AG+R E+    ++  G +++ A  +  P A+
Sbjct: 400 AH--------------LDYAKGVQDKLQRAGLRVEVD-DRNEKLGYKIREAQTKKIPYAL 444

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E   G + ++        + E+    S     V+
Sbjct: 445 VLGDQEMESGTVNVRRYGSKDSETMELDTFISQVVQEVS 483


>gi|154248664|ref|YP_001419622.1| ATP phosphoribosyltransferase regulatory subunit [Xanthobacter
           autotrophicus Py2]
 gi|154162749|gb|ABS69965.1| tRNA synthetase class II (G H P and S) [Xanthobacter autotrophicus
           Py2]
          Length = 392

 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 116/349 (33%), Gaps = 53/349 (15%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
           + D++   +E  GF   + P+L  +D+      +  R  + ++   D DG+ + LR D+T
Sbjct: 17  LEDALIACFETAGFSRHDPPILHPADAFLDLSGESIR--RRMYLTADADGRELCLRPDIT 74

Query: 89  APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            P+AR V      +    R   +GPVFR    G G FRQ            A  A+    
Sbjct: 75  IPVARAVIAERMPLP--ARVSYLGPVFRFRGEGSGEFRQAGVESFGRTDIEAADAEMVAL 132

Query: 149 MMMADTLE----------AVGIKRNDYHIGINNRKILDGILE-----KIGLHGDDKLNER 193
            + A  L            VG+             +   +L+     ++      +    
Sbjct: 133 GLNACALYGVPQPEIRLGDVGLFAALLEALPLAPALRRRLLKDFGQSRLDADLGRQKARP 192

Query: 194 LIVLRAI----DKLDKFGLQGVKLLLGE-------------------GRTDNSGDFTKGA 230
                A       L     +  + L+ +                    R         GA
Sbjct: 193 QESASAHAGVLAALTGADPEAARALITDLLSIAGISTVGGRTVSEIAERFLEQSSLEAGA 252

Query: 231 NLTSEQIDIMVSFLSIDL--EKSMHELYELVKGTIAGE-KGFNELVVISELVRKSGYNSN 287
            L+ E  +I+  +L+I    +++   +  L            +     +  +     N +
Sbjct: 253 GLSGETGEILSRYLAISGTPDEASARMRALAADAGIDLSAALDTFDRRTGFLTAFAVNLS 312

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
            ++ SS   R L+YY+G V+E        +        G +  GGRYD 
Sbjct: 313 DVRFSSAFGRPLDYYSGMVFELHDTSGRTD--------GPLVAGGRYDK 353


>gi|240850599|ref|YP_002971999.1| prolyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267722|gb|ACS51310.1| prolyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 441

 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 62/473 (13%), Positives = 130/473 (27%), Gaps = 70/473 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G         ++ +++   IR   E  G   I  P ++ +D L +  
Sbjct: 26  MLRAGMIRQQT-SGIYSWLPLGKKVLDKVCRIIREEQERAGAIEILMPTIQSAD-LWRES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP---- 113
              D     +  ++D   + +       ++   + R    ++  +       +       
Sbjct: 84  GRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRSYVRSYKDLPLNLYHIQWKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
             R        F        D     ++T+   M +    T   +G+K            
Sbjct: 144 RPRFGVMRAREFLMKDAYSFDLDYEGSKTSYNRMFVAYLRTFSRLGLKAIPMRADTGPIG 203

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
               +  +  +  +   +                    K  L     D+S DF+  A L 
Sbjct: 204 G--ELSHEFIILAETGESAIFC---------------NKQFLELTVPDSSIDFSDKAVLD 246

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                                   +VK   +      E+    E  + S +N        
Sbjct: 247 D-----------------------IVKQWTSFYAATEEMHNEEEWAKVSDHN-------R 276

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
              RG+E      +      P+  +                DG        +       +
Sbjct: 277 LSARGIEVGHIFHFGTKYSAPMEAKVMGQ------------DGKEHVVSMGSYGIGPSRL 324

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLG 412
             + +  +                  I  M  D +  +K      Q L+ AG    +   
Sbjct: 325 VAAAIEASHDENGIIWPKSMAPFDFGIINMKSDDEKCTKACEFLYQGLKEAGFDPLLDDR 384

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           + +  G++    D    P  II G    ++  ++IKD   G + S ++++  S
Sbjct: 385 NER-PGSKFATMDLIGLPTQIIVGPNSIAQNEVEIKDRKTGVKKSLKVEDVLS 436


>gi|325144150|gb|EGC66457.1| hypothetical protein NMBM01240013_1402 [Neisseria meningitidis
           M01-240013]
 gi|325206346|gb|ADZ01799.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
          Length = 383

 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 135/409 (33%), Gaps = 51/409 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQSDGLLNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L    
Sbjct: 123 LQAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK        VK    +G    +                         
Sbjct: 181 SATLLALM---QDKDTGAVEAQVKAWKLDGMWAKAFSLLPRL---------------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +    A      EL  + +      +    I I  + +R   Y+TG +Y 
Sbjct: 223 REVLSDARGRLPDLSAVGGALGELQAVCD-----AFPDCEIHIDLSELRVDNYHTGLLYA 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E  
Sbjct: 278 AYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPAIERQ 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         +  D++     +   + LR  G    +  G   N 
Sbjct: 327 P------------AVLVDAEDAEAAREAVEALREQGQCVVVDYGIGHNV 363


>gi|282849403|ref|ZP_06258788.1| ATP phosphoribosyltransferase [Veillonella parvula ATCC 17745]
 gi|282581107|gb|EFB86505.1| ATP phosphoribosyltransferase [Veillonella parvula ATCC 17745]
          Length = 534

 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 79/408 (19%), Positives = 145/408 (35%), Gaps = 47/408 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP GF D        ++ +   +  +  N  +  I TPL+EY D    +        + 
Sbjct: 5   QLPTGFRDDIGIVAERKDDVSQYVLGLCRNRQYTKISTPLVEYKDVFNGYAMG---RGQH 61

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++   D     + +R DLT P+ R++A     +      Y +G VF   K   G   Q  
Sbjct: 62  MYEFMDSSEVSVVIRPDLTMPIGRFLATTNIELPRTF--YYLGDVFMKNKKHRGDVNQVT 119

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++ VG     A+ E   ++ +  EA     N   + I + +    I + +GL  D+K
Sbjct: 120 QGGIEMVGYKGLEAEQECFKIIKEVNEAQ--LGNSLLLEIGDARFSRAITDALGLSDDEK 177

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                     ++ L    L     L+ + +      F          +  +   L+    
Sbjct: 178 AE-------LLEALFTKYLPRYNELISDFKNSALYPFLTVWPRLFGTVQDIKDELNQ--- 227

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                    +    A ++  + LV ++  V  +G    +++I  +      YYTG  +  
Sbjct: 228 ---------IILPAAAQRILDNLVDMANQVEATGQ---QVRIDVSTEPLQSYYTGLTFRG 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V   +  GGRYDGL+S F G  +PA G +  I  L        +S 
Sbjct: 276 YV----------DGVSQYIVSGGRYDGLLSSFDGTPMPAVGMAFNIDVLTDVTL-QGASK 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
               +   + +T    + D +        +L   GI  +     ++  
Sbjct: 325 AQDNDTLRIALTKGRVEKDFIP-------LLEACGIDCDPLHNKARKL 365


>gi|148259950|ref|YP_001234077.1| prolyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|326403096|ref|YP_004283177.1| prolyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|166980092|sp|A5FX26|SYP_ACICJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146401631|gb|ABQ30158.1| prolyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|325049957|dbj|BAJ80295.1| prolyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 437

 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/453 (10%), Positives = 120/453 (26%), Gaps = 64/453 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ + I + +R      G   I  P ++ ++ L +     D     +  +
Sbjct: 38  GIYAWLPAGLRVLHNIANIVREEQARAGSQEILMPTIQSAE-LWRESGRYDAYGPEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D   + +       ++   + R   +++  +      Y+I   FR+E        +  +
Sbjct: 97  RDRHDREMLYGPTNEEMLTAIMRDSVQSYRDLPQ--MLYQIQWKFRDEVRPRFGVLRGRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S     +  +       L  +   +      +  R               D  
Sbjct: 155 FYMKDGYSFDLDYEGAVESYRRMMLAYMRTFKRMGVRAVPMRA--------------DTG 200

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                +      L   G  GV                   + + E I++       +   
Sbjct: 201 PIGGNLSHEFHILAPTGESGV-----------------FYDSSFETIELGDDAYDYEARA 243

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            +   ++ +    A     ++    +++          I++      G +Y     +  +
Sbjct: 244 DLDAFFDRMTSLYAATDEKHDEAAWAKVPEDRRREGRGIEVGQIFYFGTKYSQAMNFTVV 303

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                   +  P +     G  R  G +                       L   +    
Sbjct: 304 GPD---GARLHPEMGSYGIGVSRLTGAIIEASHDEAGIIWPDAIAPFRASILNLRQGDQV 360

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQML-RTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                               +  +     L R A     ++       G +   AD    
Sbjct: 361 TD------------------ALCERIYDALGRDA-----LYDDREARAGEKFADADLMGH 397

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           P  +I G    ++G +++K    G+    +I++
Sbjct: 398 PWQVIVGPRGAAKGQVELKHRRTGERAELDIES 430


>gi|281491709|ref|YP_003353689.1| ATP phosphoribosyltransferase, regulatory subunit [Lactococcus
           lactis subsp. lactis KF147]
 gi|2565140|gb|AAB81902.1| unknown [Lactococcus lactis]
 gi|281375423|gb|ADA64933.1| ATP phosphoribosyltransferase, regulatory subunit [Lactococcus
           lactis subsp. lactis KF147]
          Length = 328

 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 132/363 (36%), Gaps = 51/363 (14%)

Query: 18  CPTKEIRI--------RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
              +E             +I   +R ++    +  +  P  EY+        +    N+ 
Sbjct: 7   LLPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQE 66

Query: 70  -VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F   + +GQ I+LRYD T PL R  ++         R    G +FR EK   GR  + 
Sbjct: 67  KMFQFINHEGQSITLRYDFTLPLVRLYSQ--IKDSTSARYSYFGKIFRKEKRHKGRSTEN 124

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++  G SA+ ++ E+  +    +E +G+ +  + IG           +++    D 
Sbjct: 125 YQIGIELFGESADKSELEILSLALQVIEQLGLNKTVFEIGSA------KFFQRLCHLADG 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                  +L   D      L G+   + +                + ++  + + ++   
Sbjct: 179 STELLTELLLKKD------LSGLNAFIEKNNFSKELRELLKEIFITNELSRLENLVTNTK 232

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +  +   ++ +K          E      +++        I I   +V  ++YYT  +++
Sbjct: 233 DDVLISSFDQLK----------EFSEKLSMIK-------PIIIDLGMVPKMDYYTDLMFK 275

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                  +  GGRYD L+S F+ +   A GF   +  ++ AL+  E  
Sbjct: 276 AYSSAANQ----------PILSGGRYDQLLSNFQ-EEAVAIGFCCHMDTILKALERQELE 324

Query: 369 TNN 371
            +N
Sbjct: 325 EDN 327


>gi|292489658|ref|YP_003532548.1| histidyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898128|ref|YP_003537497.1| histidyl-tRNA Synthetase [Erwinia amylovora ATCC 49946]
 gi|291197976|emb|CBJ45078.1| putative histidyl-tRNA Synthetase [Erwinia amylovora ATCC 49946]
 gi|291555095|emb|CBA23217.1| Histidyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 421

 Score = 78.0 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 71/448 (15%), Positives = 131/448 (29%), Gaps = 59/448 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             LP+GF     K + +  + L  +  I  + G++ I  P L +  + G+     +    
Sbjct: 9   LRLPKGFHVRGEKYLDVYLKSLLRLTEISRSCGYESIVLPSLGFQSTFGRAA---NVLGD 65

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             F   D  G+ + +  D TA L R+ AE   T+    +     PVFR        F Q 
Sbjct: 66  KTFEFLDRKGRNVLMSPDSTAGLLRWHAE-SRTMNDCSKIGWFAPVFRYRNVENRGFHQI 124

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
               ++   +  +                      D+ +   +  +LD I   +   G  
Sbjct: 125 GFSAINWFHNPQDI---------------------DWPLIDLSNNLLDLIRGVLDEPGSV 163

Query: 189 KLNERLIVLRAIDKL--DKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           K+N    + R I  L       + +  L+ E  T    +    +   S++   ++S    
Sbjct: 164 KINNVGAIKRTITSLLSLSDSKELIAKLMKEKSTAGKIELLTVSLPDSDEKLALLSIFGA 223

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                          T    +   ++   ++ ++      ++I  +   +   E  +G  
Sbjct: 224 TA-------RLNKGATNLVLEMQKDMHNFADKLKNV----DKIDFALDNLHSSEIVSGIG 272

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            E                   +G GGRYD     F  +         GI      + S  
Sbjct: 273 IEFYTANGA-----------RIGDGGRYDEYAKIFDSRCQTLVSVCSGIEAFFRNINSYN 321

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                      + I         L         LR   IR E      K     +    +
Sbjct: 322 ----EPHPNIDLAIICFPEAQSLLKDC---VYKLRNKNIRVEEIPLLGK-IKGAISKV-K 372

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           +      I G  E       + + + G 
Sbjct: 373 QKAKYYCIIGNDEMRDAHFIVHN-STGD 399


>gi|289614025|emb|CBI59175.1| unnamed protein product [Sordaria macrospora]
          Length = 1649

 Score = 78.0 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 73/495 (14%), Positives = 153/495 (30%), Gaps = 65/495 (13%)

Query: 19   PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
              +E+  +  + D++ +I+  +G   +E P            P      +    L D +G
Sbjct: 1027 SPQELMRQFIVKDTLVSIFRRHGA--VEAPT-------ACLYPSSSHYPQNAVHLLDQNG 1077

Query: 79   QWISLRYDLTAPLARYVA--ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
              + L +DL    AR +A   N   +        I                       + 
Sbjct: 1078 TVLQLPFDLMMGHARSLARITNSPIVQKSYSFGNIFRDRHGGGQPDVYGEVDFDIITSDA 1137

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
               A      + ++         +        + +  +L+ I E  G+    +     ++
Sbjct: 1138 LDLALKEAEVIKVLDEIATAFPTVSSTPICFQLGHSDLLNLIFEYCGVEVGTRRAAAEVL 1197

Query: 197  LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHEL 255
             +    +  F  Q V+  L                +++  +D +  F   D   K++ ++
Sbjct: 1198 SKL--NIRNFTWQKVRGELRSPMV----------GISATSVDELQRFDFRDTPSKAISKI 1245

Query: 256  YELVKGTIAGEKGF---NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
              L +GT   ++       L  + E  ++ G  +       + +    +  G ++  +  
Sbjct: 1246 KLLFEGTEYYQQASSTLAHLKEVYEYTKRFGVQNKIYIAPLSSINEAFFRGGILFSCLYD 1305

Query: 313  FPVMNE-----------KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
              V +            K+     G+        G    ++ Q       + G + L  A
Sbjct: 1306 KKVKDVFAAGGRYDSLIKEHRPKIGNRFEERHAVGFSLNWEKQLAKPVPKATGKAFLKKA 1365

Query: 362  LKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
             +       NIK      +     D +   S      Q L    I AE+    +++  + 
Sbjct: 1366 AEEESQGLFNIKRCD---VLVASFDPEVLRSSGIELVQTLWAHCISAELA-RDARSPEDL 1421

Query: 421  L-KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
            L KY D     + II     +   ML+IK +                         IP  
Sbjct: 1422 LSKYRDESYSWIVII-----KQDNMLKIKTM----------------GRKDAPDADIPAK 1460

Query: 480  ELVSTVKKILQENKE 494
            EL++ +K  ++EN++
Sbjct: 1461 ELLNWLKAEMRENRD 1475


>gi|239618079|ref|YP_002941401.1| prolyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259511603|sp|C5CFP9|SYP_KOSOT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239506910|gb|ACR80397.1| prolyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 581

 Score = 78.0 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 59/552 (10%), Positives = 138/552 (25%), Gaps = 92/552 (16%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++   +R      G   I  P+++ ++   +     D     +   
Sbjct: 38  GVYTYLPLGLRVLKKVEQIVREEMAAIGCQEILMPIIQPAELWFES-GRWDDYGPEMMKF 96

Query: 74  QDDDGQWISLRY---DLTAPLAR---------------YVAENFDTIVFPCRTYRIGPVF 115
           +D   +  +L     +L   + R                  +  D I       R     
Sbjct: 97  KDRHERDFTLGPTHEELLTSIVRNELRSYRQFPLSLFQIANKYRDEIRPRFGLIRAREFL 156

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
             + +      + +     +   +       + +         G    D     N     
Sbjct: 157 MKDAYSFHTDWESLDKAYKDFYKAYGRIMERIGLKYLVVEADTGAIGGDESHEFNALADT 216

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
                     G    +E+   +   D+      +    L+         +      +T E
Sbjct: 217 GESTLLYCDCGYAASDEKAEYMMLSDEDPDVQEEKALELVETPGVRTVQEVADFLKVTPE 276

Query: 236 QIDIMVSFLSIDL------EKSMHELYELVKGTIAGEK-GFNELVVISELVRKSGYNSNR 288
           QI   + +   +                 +K  +  +      L  + E           
Sbjct: 277 QIVKSLLYRGKEGFVMALIRGDQELNESKLKAHLKDQTLTMATLEEVLENFGVPIGFIGP 336

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           + ++  +    ++    +   ++G        K V  G       +  L    +G   P 
Sbjct: 337 VGMNDKVKIVADFTVKPLRNFVVGGMKEGYHYKGVCLGRDFSVDEWFDLKLAVEGDPCPK 396

Query: 349 TGFSIGISRLIVA----------------------------------------------- 361
            G  + +++ I                                                 
Sbjct: 397 CGKPMKMTKGIELGHIFKLGTKYSEKMNGYFTDENGENHPYIMGCYGWGISRTMSAVVEQ 456

Query: 362 -LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                            ++IT ++   + +SK       L        +      + G +
Sbjct: 457 MHDEHGMIWPLSIAPFHIIITMVNPSQEQISKVGEELYELLKEKYEVLLD-DRQASPGVK 515

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE-LSREIKNNESWREARVAQITIPIS 479
            K AD    PL I  G    ++G++++K L   K+ +   I                   
Sbjct: 516 FKDADLIGIPLRITVGKK-LTKGLIELK-LRTEKQLVEVSISEGY--------------D 559

Query: 480 ELVSTVKKILQE 491
            ++ TV+K+L++
Sbjct: 560 SVLETVEKLLKK 571


>gi|293608690|ref|ZP_06690993.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829263|gb|EFF87625.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 388

 Score = 78.0 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 78/423 (18%), Positives = 148/423 (34%), Gaps = 60/423 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++  ++     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVIEKLRREALDFLAVRGYQLVYTPFIEYIESLSSLSESNQDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   +    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGVRADMTPQVARIDA-HVRPVEGVARYCYSGTVLHTKPQNFNATRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   +E +   +   H+ + +  +   +++  GL  +++
Sbjct: 128 QLGAELYGHDSIEADVEMVDVMLGLIENIYTLQG-AHLDLGHVGLFRSLVKCAGLSKNEE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    +  N G         S  ++ + + LS ++ 
Sbjct: 187 HELSDLYQR----------KALPELAEFTQNLNMGSDFYALGRYSSDLEALQANLSANIL 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +               +   + L      ++   + +  I I    +R   Y+TG +Y  
Sbjct: 237 QDAE-----------FKSALDALKTTLAQIKGR-WPNLNIGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  +  PATGFS         L +L +  
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSCD-------LYALGA-- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            N       ++     + D LS     +   R  G+R    LG+           D  + 
Sbjct: 325 -NQFAEIETVVAPKGSEQDLLSA---ISNA-RAQGLRVVQLLGND----------DLSSI 369

Query: 430 PLA 432
           P A
Sbjct: 370 PYA 372


>gi|294649973|ref|ZP_06727363.1| ATP phosphoribosyltransferase [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824142|gb|EFF82955.1| ATP phosphoribosyltransferase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 388

 Score = 78.0 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 79/405 (19%), Positives = 144/405 (35%), Gaps = 50/405 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++   +     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVVETLRREALDFLAVRGYQLVYTPFIEYIESLSSLSESNQDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   I    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGVRADMTPQVARIDA-HVRPIEGVARYCYAGTVLHTKPQNFNSTRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   L+         H+ + +  +   ++++ GL+ + +
Sbjct: 128 QLGAELYGHDSIEADVEMIDVMLALLKHTRRLEG-VHLDLGHVGLFRSLVKRAGLNKNTE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    +    G         +  +D + S LS D+ 
Sbjct: 187 SELSDLYQR----------KALPELEEFTKDLAMGPDFYALGRYASDLDALESHLSQDIL 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K               +  F+ L      ++   + +  I I    +R   Y+TG +Y  
Sbjct: 237 KD-----------EDFKNAFDALKSTFAQIQSR-WPNLNIGIDVIELRSYHYHTGLMYAI 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  +  PATGFS         L +L ++ 
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSCD-------LYALGATQ 326

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               E    ++    +D D L+         R+ G+R    LG+ 
Sbjct: 327 FVDIE---TVVAPKGNDQDLLNAIVAA----RSQGLRVVQLLGND 364


>gi|325121491|gb|ADY81014.1| ATP phosphoribosyltransferase [Acinetobacter calcoaceticus PHEA-2]
          Length = 388

 Score = 78.0 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 78/423 (18%), Positives = 148/423 (34%), Gaps = 60/423 (14%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++  ++     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVIEKLRREALDFLAVRGYQLVYTPFIEYIESLSSLSESNQDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   +    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGVRADMTPQVARIDA-HVRPVEGVARYCYSGTVLHTKPQNFNATRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   +E +   +   H+ + +  +   +++  GL  +++
Sbjct: 128 QLGAELYGHDSIEADVEMVDVMLGLIENIYTLQG-AHLDLGHVGLFRSLVKCAGLSKNEE 186

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                +  R          + +  L    +  N G         S  ++ + + LS ++ 
Sbjct: 187 HELSDLYQR----------KALPELAEFTQNLNMGSDFYALGRYSSDLEALQANLSANIL 236

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +               +   + L      ++   + +  I I    +R   Y+TG +Y  
Sbjct: 237 QDAE-----------FKSALDALKTTLAQIKGR-WPNLNIGIDVVELRSYHYHTGLMYAV 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  +  PATGFS         L +L +  
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RARPATGFSCD-------LYALGA-- 324

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
            N       ++     + D LS     +   R  G+R    LG+           D  + 
Sbjct: 325 -NQFAEIETVVAPKGSEQDLLSA---ISNA-RAQGLRVVQLLGND----------DLSSI 369

Query: 430 PLA 432
           P A
Sbjct: 370 PYA 372


>gi|296284463|ref|ZP_06862461.1| ATP phosphoribosyltransferase [Citromicrobium bathyomarinum JL354]
          Length = 368

 Score = 78.0 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 5/192 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD    +  +  R + +  +  + +G+D +  PL+E+  SLG  +       + +
Sbjct: 8   LPEGLADNLPADSAMLGRAMRAALDAMDAHGYDRVSPPLVEFEKSLGHRMDG--LQTRAM 65

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F   D    + ++LR D+T  + R  A        P R    G V R         RQ +
Sbjct: 66  FRFVDPASLRTLALRSDITPQIGRIAATALSARARPLRLCYAGEVTRIAADQLDPVRQRL 125

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   + +GS +  A +E+ +     LEAVG+   +  +      ++  +        +++
Sbjct: 126 QVGAELIGSDSVAAASEVVLTALAALEAVGV--ENLSVDFTLPDLVTTLAAGPFPLDEEQ 183

Query: 190 LNERLIVLRAID 201
            +     L A D
Sbjct: 184 ADAVRRELDAKD 195


>gi|269797194|ref|YP_003311094.1| ATP phosphoribosyltransferase [Veillonella parvula DSM 2008]
 gi|269093823|gb|ACZ23814.1| ATP phosphoribosyltransferase [Veillonella parvula DSM 2008]
          Length = 534

 Score = 78.0 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 78/408 (19%), Positives = 141/408 (34%), Gaps = 47/408 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP GF D        ++ +   +  +  N  +  I TPL+EY D    +        + 
Sbjct: 5   QLPTGFRDDIGIVAERKDDVSQYVLGLCRNRQYTKISTPLVEYKDVFNGYAMG---RGQH 61

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++   D     + +R DLT P+ R++A     +      Y +G VF   K   G   Q  
Sbjct: 62  MYEFMDSSEVSVVIRPDLTMPIGRFLATTNIELPRTF--YYLGDVFMKNKKHRGDVNQVT 119

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++ VG     A+ E   ++ +  EA     N   + I + +    I + +GL  D+K
Sbjct: 120 QGGIEMVGYKGLEAEQECFKIIKEVNEAQ--LGNSLLLEIGDARFSRAITDALGLSDDEK 177

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                     ++ L    L     L+ + +      F          +  +   L+    
Sbjct: 178 AE-------LLEALFTKYLPRYNELISDFKNSALYPFLTVWPRLFGTVQDIKDELNQ--- 227

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                    +    A ++  + LV ++  V  +G    +++I  +      YYTG  +  
Sbjct: 228 ---------IILPAAAQRILDNLVDMANQVEATGQ---QVRIDVSTEPLQSYYTGLTFRG 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +            V   +  GGRYDGL+S F G  +PA G +  I  L     +L+ ++
Sbjct: 276 YV----------DGVSQYIVSGGRYDGLLSSFDGTPMPAVGMAFNIDVLTDV--TLQGAS 323

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                    +  T                     GI  E     ++  
Sbjct: 324 KAQDNDTLRIALTKGRVEKDFIPLLETC------GIDCEPLHNKARKL 365


>gi|183221318|ref|YP_001839314.1| ATP phosphoribosyltransferase regulatory subunit [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
 gi|167779740|gb|ABZ98038.1| Putative histidyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 348

 Score = 77.6 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 125/375 (33%), Gaps = 43/375 (11%)

Query: 1   MGKKTKLRAE----LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           M  K K  +     +P GF     +E + R  +L S   ++E  G+  I  P  +YS+S 
Sbjct: 8   MNHKNKPISSEQKWIPDGFHFLGPEESKNRRNLLQSFSELFEKEGYSEITLPSFDYSNSF 67

Query: 57  GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
              L D     + +   +D DG  +S   DLT  + + +A            Y      R
Sbjct: 68  RSQLQDGL---ESLLVAKDWDGNELSPGVDLTLQVVKGMAARS-HWEENQNVYYFAKKIR 123

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           + K      R+ +Q  V+++G+S          ++    +     +  + +   +     
Sbjct: 124 DHKKRNASRREVLQVGVESLGNSDTNHLISQIKILKKLWDNTLPNK-TFTLVFGHSSFFR 182

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
            ILE +G + +                       ++  L               N +   
Sbjct: 183 TILEILGWNEEQ-------------------TNVLRQFLYTKNLPELVSLAARENTSETH 223

Query: 237 IDIMVSFLSIDLEKSMHELYELVK---GTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           + I+   L   L   M    + ++         K  ++L  I+            I    
Sbjct: 224 MQIIQLLLKPILSSEMGVFKKTLETVLSKDELLKVKHDLESITSFFEVWNKEMKGIFCIF 283

Query: 294 T--IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
              +VR L YYTG +++  +                V  GG Y+ L + F G    A GF
Sbjct: 284 DPALVRDLSYYTGFMFQGYVEQDP----------EPVFAGGVYNDLYASFTGIQKDACGF 333

Query: 352 SIGISRLIVALKSLE 366
           ++ +  + V L   +
Sbjct: 334 ALHLDAIEVMLNKEK 348


>gi|189911409|ref|YP_001962964.1| ATP phosphoribosyltransferase regulatory subunit [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167776085|gb|ABZ94386.1| histidine biosynthesis protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
          Length = 341

 Score = 77.6 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 125/375 (33%), Gaps = 43/375 (11%)

Query: 1   MGKKTKLRAE----LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
           M  K K  +     +P GF     +E + R  +L S   ++E  G+  I  P  +YS+S 
Sbjct: 1   MNHKNKPISSEQKWIPDGFHFLGPEESKNRRNLLQSFSELFEKEGYSEITLPSFDYSNSF 60

Query: 57  GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
              L D     + +   +D DG  +S   DLT  + + +A            Y      R
Sbjct: 61  RSQLQDGL---ESLLVAKDWDGNELSPGVDLTLQVVKGMAARS-HWEENQNVYYFAKKIR 116

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           + K      R+ +Q  V+++G+S          ++    +     +  + +   +     
Sbjct: 117 DHKKRNASRREVLQVGVESLGNSDTNHLISQIKILKKLWDNTLPNK-TFTLVFGHSSFFR 175

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
            ILE +G + +                       ++  L               N +   
Sbjct: 176 TILEILGWNEEQ-------------------TNVLRQFLYTKNLPELVSLAARENTSETH 216

Query: 237 IDIMVSFLSIDLEKSMHELYELVK---GTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           + I+   L   L   M    + ++         K  ++L  I+            I    
Sbjct: 217 MQIIQLLLKPILSSEMGVFKKTLETVLSKDELLKVKHDLESITSFFEVWNKEMKGIFCIF 276

Query: 294 T--IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
              +VR L YYTG +++  +                V  GG Y+ L + F G    A GF
Sbjct: 277 DPALVRDLSYYTGFMFQGYVEQDP----------EPVFAGGVYNDLYASFTGIQKDACGF 326

Query: 352 SIGISRLIVALKSLE 366
           ++ +  + V L   +
Sbjct: 327 ALHLDAIEVMLNKEK 341


>gi|328951014|ref|YP_004368349.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451338|gb|AEB12239.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 647

 Score = 77.6 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L+  +   Q LR AGIR E+   S +    +++ A+ +  P+ +
Sbjct: 547 WLAPVQVVVVPITDRHLAYAREVAQALREAGIRVEVDTRSER-MNAKIRDAETQKVPVIL 605

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E ++  + ++D    +  +R ++       ARV 
Sbjct: 606 VVGDQEVAQRTVAVRDRRTKERATRPLEAVVQDLVARVQ 644



 Score = 37.1 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 16/48 (33%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           +G      K   +R  ++  +R      G+  + TP +   +      
Sbjct: 268 KGLPLWLPKGNTVRELLVQFMREEQLRRGYQLVTTPHVGSLELYKTSG 315


>gi|73662814|ref|YP_301595.1| prolyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|114152258|sp|Q49X48|SYP_STAS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72495329|dbj|BAE18650.1| prolyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 566

 Score = 77.6 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 63/536 (11%), Positives = 143/536 (26%), Gaps = 77/536 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E      I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLAARVLNNIEAIVREEMERIDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  LQD +G+  +L     ++   + R   +++  +       +         
Sbjct: 86  WSAYGPELMRLQDRNGREFALGPTHEEVVTSIVRDELKSYKQLPLTLFQIQSKYRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E      ++                A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEDSLDASYQDMYNAYGRIFKRVGINARPVVADSGAIGGS 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
                 A+     D  +          I +   ++  ++ +E L  L  I+  +    Q 
Sbjct: 206 HTHEFMALSEIGEDTIVYSEQSDYAANIEKAEVVYQANEKHEDLQPLTKIETPNIHTAQE 265

Query: 211 VKLLLGE----------GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELYEL 258
           +   L +           + D                  + ++   D  +  S  E+  L
Sbjct: 266 LATFLDKPLDEITKSMVFKIDGEFIMVLVRGHHELNDIKLKAYFGTDNIELASEDEIVNL 325

Query: 259 VKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +               +   +  +     +           +++ I R  E      +  
Sbjct: 326 LGAKPGSLGPVFDKEIKVYADNFIQDLNNIVVGANEDGYHLLNANIGRDFEVDAFGDFRF 385

Query: 310 ILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVPAT------GFSIGIS 356
           IL    +++   P  F            G +Y   ++     N           + IG+S
Sbjct: 386 ILEGEPLSDGSGPARFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLLMGCYGIGVS 445

Query: 357 RLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           R + A+    +         ++      LIT      D           L        ++
Sbjct: 446 RTLSAIVEQNNDENGIIWPKSVTPFDLHLITINPKKDDQRELADQLYTQL-KENYDV-LY 503

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
               +  G +   AD    P+ ++ G    + G++++K    G+     + N  ++
Sbjct: 504 DDRKERAGVKFNDADLIGLPVRVVVGKN-AAEGIVEVKRRDTGESEDVHVDNLINY 558


>gi|86749715|ref|YP_486211.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|114152241|sp|Q2IWW0|SYP_RHOP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|86572743|gb|ABD07300.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 439

 Score = 77.6 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 56/453 (12%), Positives = 122/453 (26%), Gaps = 62/453 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R      G   +  P L+ +D L +     D     +  +
Sbjct: 38  GIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLAD-LWRESGRYDAYGPEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D   + +       ++   + R   +++ ++      Y I   FR+E+       +  +
Sbjct: 97  SDRHKRELLYGPTNEEMITEIFRAYVKSYKSLP--LNLYHIQWKFRDEQRPRFGVMRGRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S      A         +  +             R  L  I            
Sbjct: 155 FLMKDAYSFDVDEAAARKSYNRMFVAYLRTFA---------RMGLKAI------------ 193

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               ++   G    D S +F   A      +      LS+ +  
Sbjct: 194 -------------------PMRAETGPIGGDLSHEFIVLAETGESGVYCDRDVLSLPVPD 234

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              +    +  T   ++  +      ++     Y S   + +    RG+E      +   
Sbjct: 235 ETVDYDGDL--TPIIKQWTSVYAATEDVHDAVRYESEVPEANRLHTRGIEVGQIFYFGTK 292

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
               +      P    +   GG Y   VSR  G  + A                      
Sbjct: 293 YSDSMKANVAGPDGTDAPIHGGSYGVGVSRLVGAIIEACH------------DDNGIIWP 340

Query: 371 NIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                  V I  +     +     +   + L   G+   ++  + +  G +   AD    
Sbjct: 341 EEVAPFRVAILNLKQGDAATDAACEQLYKELAAKGVDV-LYDDTDQRAGAKFATADLIGI 399

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           P  ++ G    + G +++K  + G   +  +  
Sbjct: 400 PWQVLVGPKGLADGKIELKRRSDGSRENIALAE 432


>gi|294793229|ref|ZP_06758375.1| ATP phosphoribosyltransferase [Veillonella sp. 6_1_27]
 gi|294794741|ref|ZP_06759876.1| ATP phosphoribosyltransferase [Veillonella sp. 3_1_44]
 gi|294454103|gb|EFG22477.1| ATP phosphoribosyltransferase [Veillonella sp. 3_1_44]
 gi|294456174|gb|EFG24538.1| ATP phosphoribosyltransferase [Veillonella sp. 6_1_27]
          Length = 553

 Score = 77.6 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 74/352 (21%), Positives = 129/352 (36%), Gaps = 39/352 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP GF D        ++ +   +  +  N  +  I TPL+EY D    +        + 
Sbjct: 24  QLPTGFRDDIGIVAERKDDVSQYVLGLCRNRQYTKISTPLVEYKDVFNGYAMGR---GQH 80

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++   D     + +R DLT P+ R++A     +      Y +G VF   K   G   Q  
Sbjct: 81  MYEFMDSSEVSVVIRPDLTMPIGRFLATTNIELPRTF--YYLGDVFMKNKKHRGDVNQVT 138

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++ VG     A+ E   ++ +  EA     N   + I + +    I + +GL  D+K
Sbjct: 139 QGGIEMVGYEGLEAEQECFKIIKEVNEAQ--LGNHLLLEIGDARFSRAITDALGLSDDEK 196

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                     ++ L    L     L+ + +      F          +  +   L+    
Sbjct: 197 AE-------LLEALFTKYLPRYNELISDFKNSALYPFLTVWPRLFGTVQDIKDELNQ--- 246

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                    +    A ++  + LV ++  V  +G    R++I  +      YYTG  +  
Sbjct: 247 ---------IILPAAAQRILDNLVDMANQVEATGQ---RVRIDVSTEPLQSYYTGLTFRG 294

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
            +            V   +  GGRYDGL+S F G  +PA G +  I  L   
Sbjct: 295 YV----------DGVSQYIVSGGRYDGLLSSFDGTPMPAVGMAFNIDVLTDV 336


>gi|110633394|ref|YP_673602.1| prolyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|123162548|sp|Q11JI8|SYP_MESSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110284378|gb|ABG62437.1| prolyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 442

 Score = 77.6 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 48/451 (10%), Positives = 113/451 (25%), Gaps = 67/451 (14%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+ +++   +R   +  G   I  P ++ +D   +     D   K +  ++D  
Sbjct: 42  WLPLGKRVLDKVCQIVREEQDRAGAQEILMPTIQSADLWIESGRYND-YGKEMLRIRDRQ 100

Query: 78  GQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFRQFIQ 130
            + +       ++   + R   +++  +       +                  F     
Sbjct: 101 DRAMLYGPTNEEMVTDIFRAYVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDA 160

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              D     A+ A   M +    T   +G+K                          D  
Sbjct: 161 YSFDLDYEGAKAAYNRMFVAYLRTFARMGLKAIPMRADTGPIGG-------------DLS 207

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
           +E +I+    +          K  L         DFT  A +     +    + + D   
Sbjct: 208 HEFIILASTGESEVFC----NKDFLDLPVPPADVDFTNDAEIGGVVSEWTTPYAATDEMH 263

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                 E+        +G     +     + S   + ++         +   +  +    
Sbjct: 264 DEAAWAEVPAEKQLAARGIEVGHIFHFGTKYSKPMNAKVTGPDGQEHFVSMGSYGIGPTR 323

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           L   ++                            +V      +G +      + L +   
Sbjct: 324 LTAAIIEASHDDGGII----------WPESVAPFDVALINMKVGDAECDRVCEELYAGMT 373

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                                           AG    ++  + +  G +   AD    P
Sbjct: 374 -------------------------------AAGREV-LYDDTDQRAGAKFATADLIGLP 401

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +I G    + G +++K+ A G+  +  I 
Sbjct: 402 WQVIVGPRGIAAGEVEVKNRATGERENLPIS 432


>gi|39725443|emb|CAE45679.1| Threonyl-tRNA synthetase [Streptomyces parvulus]
          Length = 675

 Score = 77.6 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 55/449 (12%), Positives = 117/449 (26%), Gaps = 83/449 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG          IR+ + D  R      G+  + TP +   D             + +++
Sbjct: 283 RGLPLWLPNGAIIRDELEDWARKTERKLGYKRVVTPHITQEDLYY-LSGHLPYYAEDLYA 341

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             D DG+   L+                        Y+  P    +              
Sbjct: 342 PIDIDGEKYYLKP--------------MNCPHHHMVYKARPHSYRDLPYK---------- 377

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              V         E    +   +   G  +ND HI     +  D  LE + +H D     
Sbjct: 378 ---VAEYGTVYRFERSGQLHGMMRTRGFSQNDAHIYCTADQAKDQFLEVMRMHADYYRTL 434

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            +     +  L        K    E   +++   T+ A   S+    +    +      +
Sbjct: 435 GISDFYMVLALRD-SANKDKYHDDEQMWEDAERITREAMEESDIPFQIDLGGAAHYGPKV 493

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             +   V G           +   +    + ++S+  +    ++      +   + A L 
Sbjct: 494 DFMIRAVTGKEFAASTNQVDLYTPQRFGLTYHDSDGTEKPVVVIHRAPLGSHERFTAYLT 553

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                       F       +                                       
Sbjct: 554 E------HFAGAFPVWLAPEQ--------------------------------------- 568

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  +  +    +     +    ML  A +RA++  G  +    +++ A  R  PL 
Sbjct: 569 -------VRIIPIVEELTDYAEEVRDMLLDADVRADVDAGDGR-LNAKVRAAVTRKIPLV 620

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  E  +  + ++D   G+E    ++
Sbjct: 621 VVVGRREAEQRTVTVRD-RSGEETPMSLE 648


>gi|254502934|ref|ZP_05115085.1| prolyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439005|gb|EEE45684.1| prolyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 442

 Score = 77.6 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 49/447 (10%), Positives = 110/447 (24%), Gaps = 63/447 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++  +I   +       G   +  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPLGLKVLRKIERIVEEEQARAGAVQLLMPTIQPAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D   + +       ++   + R    ++  +      Y I   FR+E        +  +
Sbjct: 97  TDRHEREMLFGPTNEEMITDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGIMRGRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             +                                              +      D + 
Sbjct: 155 FLMK---------------------------------------------DAYSFDLDQET 169

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                    +  L  F   G+K +  +  T   G             + ++   + + E 
Sbjct: 170 ARHAYNRMFVAYLRTFDRMGLKAIPMKADTGPIGGDLSH--------EFIILAETGESEV 221

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + +    +         +++L  I E        ++ +   +      E          
Sbjct: 222 FLDKSLLEMPIPAKDTDFWSDLSPIVESWTTPYAATDEMHDEAAFGALEEDTRVSARGIE 281

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +G       +     G+         +        V  +     +               
Sbjct: 282 VGHIFYFGTKYSDAMGAKVATAEGTEVPVHMGSYGVGVSRLLGALIEANH--DEDGIIWP 339

Query: 371 NIKEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                  V I  M    D      +     L  AGI        S+  G +    D    
Sbjct: 340 KSVAPFHVGIINMRPGDDLTDPVCEDLYAKLEAAGIEVLYDDTDSRA-GAKFATMDLIGL 398

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKEL 456
           P  ++ G      G+L++KD A G++ 
Sbjct: 399 PFQVVAGPRGLKDGVLEVKDRATGEKE 425


>gi|254804692|ref|YP_003082913.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis alpha14]
 gi|254668234|emb|CBA05042.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis alpha14]
 gi|325127911|gb|EGC50814.1| hypothetical protein NMXN1568_1329 [Neisseria meningitidis N1568]
          Length = 383

 Score = 77.6 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 135/409 (33%), Gaps = 51/409 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLLNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L    
Sbjct: 123 LQAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK        VK    +G    +                         
Sbjct: 181 SATLLALM---QDKDTGAVEAQVKAWKLDGMWAKAFSLLPRL---------------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +    A      EL  + +      +    I I  + +R   Y+TG +Y 
Sbjct: 223 REVLSDARGRLPDLSAVGGALGELQAVCD-----AFPDCEIHIDLSELRVDNYHTGLLYA 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  +  PATGFS  +   I  L ++E  
Sbjct: 278 AYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPTIERQ 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         +  D++     +   + LR  G    +  G   N 
Sbjct: 327 P------------AVLVDAEDAEAAREAVEALREQGQCVVIDYGIGHNV 363


>gi|218463078|ref|ZP_03503169.1| prolyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 440

 Score = 77.6 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 62/455 (13%), Positives = 127/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR+     G   +  P L+ ++ L +     D   K +  +
Sbjct: 38  GIYSWLPLGKRVLDKVNAIIRDEQNRAGAIELSMPTLQSAE-LWQESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEKHGPGRFR 126
           +D   + +       ++   + R   +++  +       +         R        F 
Sbjct: 97  KDRQDRPMLYGPTNEEMVTDIFRSSVKSYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFM 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D     AE +  +M      T E +G               L  I        
Sbjct: 157 MKDAYSFDLTREGAEHSYNKMFAAYLRTFERLG---------------LRAI-------- 193

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                                   ++   G    + S +F   A+    ++     F+  
Sbjct: 194 -----------------------PMRADTGPIGGNLSHEFIILADTGESEVFCHKDFVGF 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D+       ++ V+G  A  + +  L   +  +      +   +      RG+E      
Sbjct: 231 DIPDE-RTDFDSVEGLQAIFEKWTSLYAATSEMHDEAAFNAVPESDRLSARGIEVGHIFY 289

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +       +  + Q P         G Y         + VPA   +      I+      
Sbjct: 290 FGTKYSETMGAKVQGPDGKEHFVHMGSY----GIGPTRLVPAIIEASHDDNGII------ 339

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++     V+I     D       ++    L  AG          +  G +   AD 
Sbjct: 340 -WPASVAPFDIVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRA-GTKFATADL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P+ II G    + G +++KD   G   +  I+
Sbjct: 398 IGVPVQIIAGPRAVANGEVEVKDRKTGARETMTIE 432


>gi|225849003|ref|YP_002729167.1| prolyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644474|gb|ACN99524.1| prolyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 563

 Score = 77.6 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 70/508 (13%), Positives = 130/508 (25%), Gaps = 76/508 (14%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            L  G  +      R+  +I + IR   +  G   +  P+L  ++ L K     D   K 
Sbjct: 34  SLAAGIYEYLPLGFRVLKKIENIIRKRMDEAGALELLLPILTPAE-LWKETGRWDVYGKE 92

Query: 70  VFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +F L+D      +L         DL     R   +           +R     R      
Sbjct: 93  LFRLKDRKDADFALGPTHEETITDLVRKNVRSYKDLPLNFYQIQTKFRDEARPRYGLIRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV------------------------ 158
             F        D     A      M        + +                        
Sbjct: 153 REFIMKDGYSFDVSEEDAIKTYEVMKETYHKIFQDLKLDYLMVEADVGAIGGKFSHEFVV 212

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
            +   + HI           +E    H      E L  L  +   +   ++ V   L   
Sbjct: 213 KVPSGEAHIVYCENCGYAANVEAAKFHHHKLPVENLKPLEKVYTPNVSSVEEVAKFLNLP 272

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
                      A+     + +++       E  +  L + +    A  +   +L ++   
Sbjct: 273 TEKIVKTLIYKAD--DRFVAVLIRGDREVNETKLANLLKALDVRPATPEELKDLGIVEGF 330

Query: 279 -----VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV--------- 324
                +    Y    IK     V G            LG  V  E+   +          
Sbjct: 331 VGPMGLDLPIYADYSIKELYNFVVGANEKDYHYINVNLGRDVKVEEFYDLATAKEGDPCP 390

Query: 325 --------------FGSVGGGGRYDGLVSRFKGQ------NVPATGFSIGISRLIVALKS 364
                               G +Y   +  +          +    + IG+SRLI A+  
Sbjct: 391 VCKNPLKETTGLEVGHIFLLGTKYSQAMKAYFTDKDGKEKPIIMGCYGIGVSRLISAIVE 450

Query: 365 LE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                      + +      ++     D  SL       +  +  G+   +      + G
Sbjct: 451 QYHDDKGIIWPDVVAPFDLHILVLNVKDEKSLKAGFEIYEKAKRQGLDVLLD-ERDISPG 509

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           ++ K AD    P  I+ G    + G ++
Sbjct: 510 SKFKDADLIGIPNRIVIGKS-LNEGKVE 536


>gi|326406744|gb|ADZ63815.1| ATP phosphoribosyltransferase regulatory subunit [Lactococcus
           lactis subsp. lactis CV56]
          Length = 328

 Score = 77.6 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 132/363 (36%), Gaps = 51/363 (14%)

Query: 18  CPTKEIRI--------RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
              +E             +I   +R ++    +  +  P  EY+        +    N+ 
Sbjct: 7   LLPEESAEMTLNQVKSLRQIEGRLRKLFGLKNYQEVMPPSFEYTQLYTALESNGKTFNQE 66

Query: 70  -VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +F   + +GQ I+LRYD T PL R  ++         R    G +FR EK   GR  + 
Sbjct: 67  KMFQFINHEGQSITLRYDFTLPLVRLYSQ--IKDSTSARYSYFGKIFRKEKRHKGRSTEN 124

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++  G SA+ ++ E+  +    +E +G+ +  + IG           +++    D 
Sbjct: 125 YQIGIELFGESADKSELEILSLALQVIEQLGLNKTVFEIGSA------KFFQRLCHLADG 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                  +L   D      L G+   + +                + ++  + + ++   
Sbjct: 179 STELLTELLLKKD------LSGLNAFIEKNSFSKELRELLKEIFITNELSRLENLVTNTK 232

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +  +   ++ +K          E      +++        I I   +V  ++YYT  +++
Sbjct: 233 DDVLISSFDQLK----------EFSEKLSMIK-------PIIIDLGMVPKMDYYTDLMFK 275

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                  +  GGRYD L+S F+ +   A GF   +  ++ AL+  E  
Sbjct: 276 AYSSAANQ----------PILSGGRYDQLLSNFQ-EEAVAIGFCCHMDTILKALERQELE 324

Query: 369 TNN 371
            +N
Sbjct: 325 EDN 327


>gi|255030929|ref|ZP_05302880.1| histidyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 100

 Score = 77.6 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%)

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           +++ QD  G+ ++LR + TA + R   E+     +  P + Y   P+FR E+   GR RQ
Sbjct: 1   MYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQPIKMYYNEPMFRYERPQGGRQRQ 60

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
           F Q  ++ +GS   + D E+  +  +    +G+  
Sbjct: 61  FTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLTN 95


>gi|194333013|ref|YP_002014873.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|238693296|sp|B4S3D2|SYT_PROA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194310831|gb|ACF45226.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 657

 Score = 77.6 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 50/470 (10%), Positives = 114/470 (24%), Gaps = 79/470 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+  G      K   +RN +   +R      G+ P+ TP +       +        
Sbjct: 266 LSPEVGSGLPIWLPKGAIVRNELESFLREEQRKRGYVPVYTPHIGNIGLYKRSG------ 319

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                                                                       
Sbjct: 320 ----------------------------------------HYPYYSESQFPPLTYTDDLG 339

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  Q  +  +            +     L     +    +    +   L+G++   G   
Sbjct: 340 REEQYLLKPMNCPHHHMIYSSKLRSYRDLPIRLTEFGTVYRHEQS-GELNGLIRARGFTQ 398

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           DD                         L+ E            A L  + I I +S    
Sbjct: 399 DDSHIYCRPD----------------QLVDEICNAIDLTKFVFATLGFDDIQIRLSLHDP 442

Query: 247 DLEKSMHELYELVKGTIAG-EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           + +       E+ +       +  + + +           ++        +         
Sbjct: 443 ENQDKYGGTKEVWEQAEKDVREAADRMNIDYFT---GIGEASFYGPKIDFIVRDAIGRKW 499

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
               +    VM E+      GS G            +   +    F      + V ++  
Sbjct: 500 QLGTVQVDYVMPERFDLSYIGSDG---------QPHRPVIIHRAPFGSMERFIGVLIEHT 550

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +      + PV I  +    +           L  AG+R E+    S+  G +++ ++
Sbjct: 551 GGNFPLW--LAPVQIAVLPITDEVHDYAVQVRDTLHAAGMRVELD-TRSEKIGKKIRESE 607

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               P  +I G  E + G + ++   +G + +  ++  +      +   +
Sbjct: 608 VAKIPYMVIIGQKEAAAGEVSLRRHREGDQGNMTVEELKEKLAKEINDKS 657


>gi|114566427|ref|YP_753581.1| prolyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318501|sp|Q0AYJ4|SYP_SYNWW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114337362|gb|ABI68210.1| prolyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 570

 Score = 77.2 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 57/523 (10%), Positives = 136/523 (26%), Gaps = 80/523 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I++ +R   +  G   +  P+++ ++ L K     +     +F L
Sbjct: 38  GVYSYLPLANRVLKKIMNIVREEMDRAGGQEVILPIIQPAE-LWKKSGRWEVYGDEMFRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAE---NFDTIVFPCRTYRIGPVF-RNEKHGPGRFR 126
           +D   +  +L     ++   L         +   +++  +      +  R        F 
Sbjct: 97  KDRHNRDFALGPTHEEIITTLVDADVHSYRHLPLLLYQIQNKYRDEIRPRFGLMRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D      + +  +M        + +   +  Y +   +   + G      +  
Sbjct: 157 MKDLYSFDIDEEGLDISYHKMYEAYNRIFQRL---KLQYRVVEADSGAIGGNESHEFMVL 213

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +     ++  +  D           L   +   +   +  K        I  +V +++I
Sbjct: 214 AENGEAEIVYCKNCDYGANTEKAVCSLEEPKVTEEEQLELEKVHTPGQRTIQDLVDYMNI 273

Query: 247 DLEKSMH-----ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL-- 299
             EK +         ELV   + G++  NE+   + L     + ++   +      G   
Sbjct: 274 PKEKQIKTLIYYADEELVAAIVRGDRELNEIKFKNVLGCNQLFMADETAVKQLCSAGFGS 333

Query: 300 ------EYYTGCVYEAI------LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
                    T    E         G    +     V  G        + + +   G + P
Sbjct: 334 LGPVGLPLKTYIDLEVSQMKNFACGANEDDYHFINVNLGRDFTPAGINDIRNAVAGDSCP 393

Query: 348 ATGFSIGISRLIVA------------LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
                +   R I              +          +E   V+       S +++    
Sbjct: 394 VCSAPLYSMRGIEVGHIFKLGTKYSEVLEANYLDQKGQEKPMVMGCYGIGISRTMAAAVE 453

Query: 396 -------------------------------------YTQMLRTAGIRAEMFLGSSKNFG 418
                                                  +  +  G+   +     +  G
Sbjct: 454 QSADENGIVWPLPITPFEVIIVPVNSKNEEQMQAAWSLYEEFKQEGLETIVDDRDERA-G 512

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            + K AD    PL I  G        +++K  +        + 
Sbjct: 513 VKFKDADLIGIPLRITIGPRSLQEKQVEVKKRSDKDIELVPLD 555


>gi|91977335|ref|YP_569994.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123762679|sp|Q135Z6|SYP_RHOPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91683791|gb|ABE40093.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 439

 Score = 77.2 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 55/454 (12%), Positives = 121/454 (26%), Gaps = 64/454 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R      G   +  P L+ +D L +     D     +  +
Sbjct: 38  GIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLAD-LWRESGRYDAYGPEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D   + +       ++   + R   +++ ++      Y I   FR+E+       +  +
Sbjct: 97  ADRHKRELLYGPTNEEMITEIFRAYVKSYKSLP--LNLYHIQWKFRDEQRPRFGVMRGRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S      A         +  +          I  R     I   +        
Sbjct: 155 FLMKDAYSFDVDEAAARKSYNRMFVAYLRTFARMGLKAIPMRAETGPIGGDL-------- 206

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                       L + G  GV                    +  E +D        DL  
Sbjct: 207 ------SHEFIVLAETGESGV----------YCDRDVLNLPVPGEDVD-----YDGDLTP 245

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + +   +   T              ++   + Y S   + +    RG+E      +   
Sbjct: 246 IIQQWTSVYAATE-------------DVHDAARYESEVPEANRLNTRGIEVGQIFYFGTK 292

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
               +      P    +   GG Y               G S  +  +I A         
Sbjct: 293 YSDSMKANVAGPDGADAPIHGGSY-------------GVGVSRLVGAIIEACHDENGIKW 339

Query: 371 NIKEMGPVLITTMDHDSDSLSKY--QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
             +     +        D+ +    +   + L   G+   ++  + +  G +   AD   
Sbjct: 340 PEEVAPFRVAILNLKQGDAQTDAACEQLYRELAAKGVDV-LYDDTDQRAGAKFATADLIG 398

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            P  ++ G    + G +++K  + G   +  +  
Sbjct: 399 IPWQVLVGPKGLADGKVELKRRSDGSRETIALAE 432


>gi|290968110|ref|ZP_06559655.1| proline--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781785|gb|EFD94368.1| proline--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 575

 Score = 77.2 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 7/140 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +  +   GF        R   +I   IR   +  G   I  P+++ ++   +  
Sbjct: 26  MLKAG-MIRKNASGFYSFLPLARRSVLKIEKIIREEMDKTGAQEIMMPIVQPAEIWQES- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D   K +F L D  G    L     +L   L R    ++  +      Y+I   +R+
Sbjct: 84  GRWDVYGKEMFKLADRHGNEYCLAPTHEELITTLVRNELRSYKQLP--VNLYQIQNKYRD 141

Query: 118 EKHGPGRFRQFIQCDVDNVG 137
           E        +  +  + +  
Sbjct: 142 EIRPRFGLMRSREFVMQDSY 161



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 3/95 (3%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYAD 425
                I     V++     D   ++  +     L +A   +E+ L       G +   AD
Sbjct: 464 LWPVAIAPYEAVILPLNMKDEVMVTAARELYTQL-SAD-SSEIVLDDRPERAGVKFNDAD 521

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
               P+ I+ G   +++G ++IK    G + +  +
Sbjct: 522 LIGYPVQIVVGKDTKTKGTVEIKVRRTGAKEAVPV 556


>gi|325292651|ref|YP_004278515.1| Prolyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060504|gb|ADY64195.1| Prolyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 477

 Score = 77.2 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 61/457 (13%), Positives = 131/457 (28%), Gaps = 71/457 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR   +  G   +  P L+ ++ L +     D   K +  +
Sbjct: 75  GIYSWLPLGKRVLDKVNRIIREEQDRSGAIELLMPTLQTAE-LWQESGRYDDYGKEMLRI 133

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D   + +       ++   + R   +++  +      Y I   FR+E        +  +
Sbjct: 134 KDRQDRQMLYGPTNEEMITDIFRSYVKSYKNLP--LNLYHIQLKFRDEVRPRFGTMRSRE 191

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S   T +  +       +  +             R  L  I            
Sbjct: 192 FLMKDAYSFDLTKEDAIHSYNKMFVAYLRTFE---------RLGLRAI------------ 230

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               ++   G    ++S +F   A+    ++    SFL   +  
Sbjct: 231 -------------------PMRADTGPIGGNHSHEFIILADTGESEVFCHKSFLDRAIPA 271

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                 ++       ++   +    SE+  ++ Y++          RG+E      +   
Sbjct: 272 DDTNFDDVAALQGVFDEWTADYAATSEMHDEAAYDAIP-DGQRLSARGIEVGHIFYFGTK 330

Query: 311 LGFP------VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
              P        + K+ PV  GS G G             +                   
Sbjct: 331 YSEPMGAKVQGADGKEHPVHMGSYGIGPTRLVPAIIEASHDENGI--------------- 375

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                 ++     V+I     D+   +  +     L  AG          +  G +   A
Sbjct: 376 --IWPASVAPFDVVIINMKAGDAACDAACEKLYYSLSNAGKDVLYDDTDDRA-GQKFATA 432

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           D    P+ II G    + G +++KD   G   +  I+
Sbjct: 433 DLIGVPMQIIVGPRSAANGEVEVKDRKTGDRETVTIE 469


>gi|284801950|ref|YP_003413815.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995092|ref|YP_003416860.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057512|gb|ADB68453.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060559|gb|ADB71498.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 640

 Score = 77.2 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 62/448 (13%), Positives = 133/448 (29%), Gaps = 81/448 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E     R+        
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAELGLMHRYEMS----- 367

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 368 --------GALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDITDY 416

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   + E + +
Sbjct: 417 SFRLSYRDPKNT----------EKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEGEAAFY 466

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++   I       R +  + G V   +  F
Sbjct: 467 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRG-VVSTMERF 525

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                              
Sbjct: 526 VAYLIEEYKGAFPTWLA------------------------------------------- 542

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               + I  ++ D+  L   +     L+ AG+RAE+    ++  G +++ A  +  P A+
Sbjct: 543 -PVQMEIIPVNADA-HLDYAKGVQDKLQRAGLRAEVD-DRNEKLGYKIREAQTKKIPYAL 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           + G  E   G + ++        + ++ 
Sbjct: 600 VLGDQEVEAGSVNVRRYGSKDSETMDLD 627


>gi|325202393|gb|ADY97847.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
 gi|325207855|gb|ADZ03307.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
          Length = 383

 Score = 77.2 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 73/409 (17%), Positives = 135/409 (33%), Gaps = 51/409 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQSDGLLNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +  G +    D E+  +M  +++   +      + + +  I   + +   L    
Sbjct: 123 LQAGAEMYGFADIRGDIELIDLMLKSMKIADM--GKVLLSLGHIGIFRALSDAAHLDAGQ 180

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                 ++    DK  +     VK    +G    +                         
Sbjct: 181 SATLLALM---QDKDTETVEAQVKAWKLDGMWAKAFSLLPRL---------------YGG 222

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + + +    +    A      EL  + +      +    I I  + +R   Y+TG +Y 
Sbjct: 223 REVLSDARGRLPDLSAVGGALGELQAVCD-----AFPDCEIHIDLSELRVDNYHTGLLYA 277

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                 +V  GGRYDGL   F  +  PATGFS  +   I  L + E  
Sbjct: 278 AYAAD----------FHDAVARGGRYDGLGGYFG-RARPATGFSFDLRSFIGRLPTSERQ 326

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                         +  D++     +   + LR  G    +  G   N 
Sbjct: 327 P------------AVLVDAEDAEAAREAVEALREQGQCVVIDYGIGHNV 363


>gi|254571943|ref|XP_002493081.1| Protein kinase, phosphorylates the alpha-subunit of translation
            initiation factor eIF2 (Sui2p) [Pichia pastoris GS115]
 gi|238032879|emb|CAY70902.1| Protein kinase, phosphorylates the alpha-subunit of translation
            initiation factor eIF2 (Sui2p) [Pichia pastoris GS115]
 gi|328352904|emb|CCA39302.1| eukaryotic translation initiation factor 2-alpha kinase [Pichia
            pastoris CBS 7435]
          Length = 1693

 Score = 77.2 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 73/497 (14%), Positives = 146/497 (29%), Gaps = 64/497 (12%)

Query: 16   ADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQD 75
             D  + +  +  +I + I NI++ +G        +  SD   K        +  V+ L D
Sbjct: 1067 QDYSSSDYLLHAKISEEIFNIFKRHGAVE----CISQSDLFPKS--PLYNVDNQVYELLD 1120

Query: 76   DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
              G  + L YDLT PLAR +  +   I    R   +     N+        +F + D D 
Sbjct: 1121 HSGSVLQLSYDLTLPLARLIGRSILPIQKIYRCGYV--YRSNDSDPASGPIRFKEIDFDI 1178

Query: 136  VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
            V   ++         +           +D        K  +           + + +   
Sbjct: 1179 VSIDSKDMVLYDAECI--------KVIDDVISIFPFFKSSNLFFILNHCTLAEYIFDFCG 1230

Query: 196  VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKSMHE 254
            + RA        L  V     +   +         N+ S  ++ +  F   ++L+ +  +
Sbjct: 1231 IERAQYIKVASILSEV--GYSKTLKEAKHILRDELNIPSTVLNDIELFDFQLELKDARSK 1288

Query: 255  LYELVKGTIAGEKGF---NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
              +L+  +    K     N L  I  L++  G          +      Y  G V++A+ 
Sbjct: 1289 FQKLMLDSPYATKSENILNYLSNIISLLKHFGVTKKVYIAPLSAYTSSFYQGGLVFQAVY 1348

Query: 312  GFP----------------VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
                                ++     +V  +VG    +D   +  +             
Sbjct: 1349 QEKFKSIVAAGGRYDSLVSSVSRHSHEIVPRAVGFRLAWDLFFTYMQRYESMFVKKHSSS 1408

Query: 356  SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             R    LK   S          VL+ +    S   S      Q L +  IRA++      
Sbjct: 1409 RRKSQFLKQSASKIKWSASRVDVLVCSF-TSSLLRSIGIDLLQQLWSCEIRADL------ 1461

Query: 416  NFGN------QLKYADRRNCPLAIIQGTGERSRGM------------LQIKDLAKGKELS 457
               N       +  A        I+    ++                L++K+  K  +  
Sbjct: 1462 -LKNCLTTDDVINRAQLDGATWVILIKQQQQEPNQYGTINTKKRYKPLRLKNFEKQTDTD 1520

Query: 458  REIKNNESWREARVAQI 474
             + +    + +  + + 
Sbjct: 1521 LDFEEVIPYIKNEMRER 1537


>gi|169612185|ref|XP_001799510.1| hypothetical protein SNOG_09211 [Phaeosphaeria nodorum SN15]
 gi|160702450|gb|EAT83403.2| hypothetical protein SNOG_09211 [Phaeosphaeria nodorum SN15]
          Length = 1399

 Score = 76.8 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 70/493 (14%), Positives = 151/493 (30%), Gaps = 54/493 (10%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPI-ETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
            +I ++N + D +  ++ ++G   I   PLL +SD            N     L D  G  
Sbjct: 793  DILLQNLVRDRLAMVFRSHGAVEIQRQPLLPWSDHYA---------NTNAVKLFDPSGTL 843

Query: 81   ISLRYDLTAPLARYVAENFDTIVFPCRTYR-IGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
            + L YDLT P AR +      +       +     +            F     D +  +
Sbjct: 844  VQLPYDLTLPYARSIGRGAPFLEKTFTIGQVYRDSYSGGAPRSNGEADFDILSYDTLDLA 903

Query: 140  AETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
             + A+  ++   + D   A G         +N+  +LD +++   +    +   + ++ R
Sbjct: 904  LKEAEVLKVVDDIIDEFPAFGST--QMCFHLNHADLLDIVMDFSRISAPQRPLVKTVLSR 961

Query: 199  AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK----SMHE 254
                 +    Q ++ LL           +    ++S  +D +  F   D  +     +  
Sbjct: 962  LNTGKN--TWQVIRNLLR----------SSDVGISSTSLDDLARFDWRDSPEKAFSKLRR 1009

Query: 255  LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
            ++E  K        F  L  +    +                    Y  G +++ +    
Sbjct: 1010 IFEGTKYLDRTHAIFAHLKSVVGYTKLWNVKRKVYVSVLGSFNEKFYAGGIMFQCLFDTK 1069

Query: 315  VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL------------ 362
                      +  +    R  G        +  A G ++G  RL+ A+            
Sbjct: 1070 QREVLAAGGRYDKLIDEYRPKGPGHAHSTSSYHAVGVNLGWDRLVNAMTRYLKKPEKSTF 1129

Query: 363  ---KSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                + E +                 DS+   S        L   G  AE+ + +  +  
Sbjct: 1130 LKKHADEDTPIVSWMPRRCDCLVASFDSNVLRSAGVKLVAELIAHGYTAELAVDAH-SVE 1188

Query: 419  NQLK-YADRRNCPLAII---QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            + L+ Y D R+  + +I          +  L++K + K ++      +  ++    +   
Sbjct: 1189 DILRHYRDDRHSWVIVIKHGLAPD---KPELKVKSIGKKEDTDLRTGDLLNYLRNELRDR 1245

Query: 475  TIPISELVSTVKK 487
                      + K
Sbjct: 1246 EAREGSAAQRLTK 1258


>gi|163803792|ref|ZP_02197646.1| prolyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159172411|gb|EDP57283.1| prolyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 571

 Score = 76.8 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 52/545 (9%), Positives = 130/545 (23%), Gaps = 83/545 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRI------------ 111
              +    D   +   L     ++   L R    ++  +       +             
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRFGV 149

Query: 112 ---GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
                    + +     ++ ++     +  +   A   M +     L   G         
Sbjct: 150 MRAREFCMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQE 209

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
            +        L       D   N       A         Q +  L+         +  +
Sbjct: 210 FHVLAESGEDLIAFSTESDYAANIEKAEAAAPAFERAQPTQEM-TLVDTPNAKTIAELVE 268

Query: 229 GANLTSEQ--------------IDIMVSFLSIDLE-KSMHELYELVKGTIAGEKGFNELV 273
              L+ E+               DI+   +  D E   +         +        E+ 
Sbjct: 269 QHGLSVEKTVKTLFVKASEEVDADIIALIVRGDHELNEVKAENLPQVASPLEMATEEEMR 328

Query: 274 VISE---------LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP---------- 314
            +            ++        + + S    G        +    G            
Sbjct: 329 ALIGAGAGSLGPVGLKLPFIVDRSVAVMSDFAAGANIDGKHYFGINWGRDVELGQIEDLR 388

Query: 315 -VMNEKQKPVVFGSVGGGGRYD--------------------GLVSRFKGQNVPATGFSI 353
            V+     P   G++      +                    G   +     +   G  +
Sbjct: 389 NVVEGDPSPCGQGTLMLKRGIEVGHIFQLGNVYSQAMNCGVLGPDGKNVILEMGCYGIGV 448

Query: 354 GISRLIVALKSLESSTNNIKE---MGPVLITTMDH--DSDSLSKYQMYTQMLRTAGIRAE 408
                    ++ +       +      V I  M+     +     +     L   G   E
Sbjct: 449 SRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMG--VE 506

Query: 409 MFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           +     K   G      +    P  I+ G      G  + K+   G++ +  + +     
Sbjct: 507 VLFDDRKERPGVMFSDMELIGIPHTIVIGDRSMKEGNFEYKNRRSGEKTAVAMTDIVEHV 566

Query: 468 EARVA 472
           +A++ 
Sbjct: 567 KAQLQ 571


>gi|313623625|gb|EFR93788.1| threonyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 640

 Score = 76.8 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 62/448 (13%), Positives = 130/448 (29%), Gaps = 81/448 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E               
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAEL-------------G 359

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 360 MMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDIKDY 416

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   + E + +
Sbjct: 417 SFRLSYRDPKNT----------EKYFDDDAMWEKAQAMLKSAMDEMHMDYFEAEGEAAFY 466

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++   I       R +  + G V   +  F
Sbjct: 467 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRG-VVSTMERF 525

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                +A   +E    N  
Sbjct: 526 VAYLIEEYKGAFPTW-------------------------------LAPVQMELIPVNAD 554

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                           L   +     L+ AG+RAE+    ++  G +++ A  +  P A+
Sbjct: 555 AH--------------LDYAKGVQDKLQRAGLRAEVD-DRNEKLGYKIREAQTKKIPYAL 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           + G  E   G + ++        + ++ 
Sbjct: 600 VLGDQEVEAGSVNVRRYGSKDSETMDLD 627


>gi|224499783|ref|ZP_03668132.1| threonyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 640

 Score = 76.8 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 61/448 (13%), Positives = 131/448 (29%), Gaps = 81/448 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E               
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAEL-------------G 359

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 360 MMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDITDY 416

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   + E + +
Sbjct: 417 SFRLSYRDPKNT----------EKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEGEAAFY 466

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++   I       R +  + G V   +  F
Sbjct: 467 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRG-VVSTMERF 525

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                              
Sbjct: 526 VAYLIEEYKGAFPTWLA------------------------------------------- 542

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               + I  ++ D+  L   +     L+ AG+RAE+    ++  G +++ A  +  P A+
Sbjct: 543 -PVQMEIIPVNADA-HLDYAKGVQDKLQRAGLRAEVD-DRNEKLGYKIREAQTKKIPYAL 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           + G  E   G + ++        + ++ 
Sbjct: 600 VLGDQEVEAGSVNVRRYGSKDSETMDLD 627


>gi|161618786|ref|YP_001592673.1| prolyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|254704135|ref|ZP_05165963.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|260566616|ref|ZP_05837086.1| prolyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261754801|ref|ZP_05998510.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|189083489|sp|A9MAJ9|SYP_BRUC2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|161335597|gb|ABX61902.1| prolyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260156134|gb|EEW91214.1| prolyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261744554|gb|EEY32480.1| prolyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 442

 Score = 76.8 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 124/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 339 IWPKAIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKMGERQSLGIE 432


>gi|261419457|ref|YP_003253139.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319766272|ref|YP_004131773.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261375914|gb|ACX78657.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317111138|gb|ADU93630.1| prolyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 567

 Score = 76.8 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 71/557 (12%), Positives = 145/557 (26%), Gaps = 98/557 (17%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++   IR      G   +  P L+ ++ L +           
Sbjct: 34  QSASGVYTFLPLGQRVLQKVEAIIREEMNRIGAMELFMPALQPAE-LWQQSGRWYSYGPE 92

Query: 70  VFSLQDDDGQWISLRY----DLTA------------PLARYVAENF--DTIVFPCRTYRI 111
           +  L+D   +  +L       +TA            PL  Y  +    D         R 
Sbjct: 93  LMRLKDRHERDFALGPTHEEMITAIVRDEVKTYKRLPLVLYQIQTKFRDEKRPRFGLLRG 152

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
                 + +     ++ +    +N+  +         +     +   G            
Sbjct: 153 REFMMKDAYSFHTSKESLDETYNNMYEAYANIFRRCGLNFRAVIADSGAIGGKDTHEFMV 212

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
              +           D   N  +  + A  +        +K +   G+     +      
Sbjct: 213 LSDIGEDTIAYSDASDYAANIEMAPVVATYEKSDEPPAELKKVATPGQK-TIAEVASHLQ 271

Query: 232 LTSEQIDIMVSFLSIDLEKSM-----HELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
           ++ E+    + F ++D    +           VK     +    EL    E  R      
Sbjct: 272 ISPERCIKSLLF-NVDGRYVLVLVRGDHEANEVKVKNVLDATVVELATPEETERVMNAPI 330

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP---VVFGSVGGGGRYDGLVSRFKG 343
             +                V   + G    NE+      V  G      +Y  L    +G
Sbjct: 331 GSLGPIGVSEDVTVIADHAVAAIVNGVCGANEEGYHYIGVNPGRDFAVSQYADLRFVKEG 390

Query: 344 QNVP-------------------------------------------ATGFSIGISRLIV 360
              P                                              + IG+SRL+ 
Sbjct: 391 DPSPDGKGTIRFARGIEVGHVFKLGTKYSEAMNAVYLDENGQTQTMIMGCYGIGVSRLVA 450

Query: 361 ALKSL------ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           A+              ++      L+T      +  +  + + + L  AG    ++    
Sbjct: 451 AIAEQFADEHGLVWPASVAPFHIHLLTANAKSDEQRALAEEWYEKLGQAGFEV-LYDDRP 509

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +  G +   +D    PL +  G      G++++K    G+                    
Sbjct: 510 ERAGVKFADSDLIGIPLRVTVGKR-AGEGVVEVKVRKTGE------------------TF 550

Query: 475 TIPISELVSTVKKILQE 491
            +P+SELV T +++LQ 
Sbjct: 551 DVPVSELVDTARRLLQS 567


>gi|316933915|ref|YP_004108897.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601629|gb|ADU44164.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 439

 Score = 76.8 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 55/456 (12%), Positives = 124/456 (27%), Gaps = 62/456 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R      G   +  P L+ +D L +     D     +  +
Sbjct: 38  GIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLAD-LWRESGRYDAYGPEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D   + +       ++   + R   +++ ++      Y I   FR+E+       +  +
Sbjct: 97  ADRHKRELLYGPTNEEMITEIFRAYIKSYKSLP--LNLYHIQWKFRDEQRPRFGVMRGRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S                +  +             R  L  I            
Sbjct: 155 FLMKDAYSFDVDEAGARKSYNKMFVAYLRTFA---------RMGLKAI------------ 193

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               ++   G    D S +F   A+     + I    L++ +  
Sbjct: 194 -------------------PMRAETGPIGGDLSHEFIVLADTGESGVFIDRDVLNLPVPD 234

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              +    +  T   ++  +      ++   + Y S   + +    RG+E      +   
Sbjct: 235 ENVDYDADL--TPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTK 292

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
               +      P    +   GG Y   VSR  G  + A                      
Sbjct: 293 YSDSMKANVAGPDGTDAPIHGGSYGVGVSRLVGAIIEACH------------DDNGIIWP 340

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                  V I  +     +         + L   G+   ++  + +  G +   AD    
Sbjct: 341 EAVAPFRVTILNLKQGDAATDAACDQLYRELSAKGVDV-LYDDTDQRAGAKFATADLIGI 399

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           P  +  G    + G +++K  + G   +  + +  +
Sbjct: 400 PWQVHVGPRGLAEGKVELKRRSDGSRENLALADLVA 435


>gi|16803599|ref|NP_465084.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501501|ref|ZP_03669808.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|22654119|sp|Q8Y6X2|SYT_LISMO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|16410988|emb|CAC99637.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 640

 Score = 76.8 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 61/448 (13%), Positives = 131/448 (29%), Gaps = 81/448 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E               
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAEL-------------G 359

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 360 MMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDITDY 416

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   + E + +
Sbjct: 417 SFRLSYRDPKNT----------EKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEGEAAFY 466

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++   I       R +  + G V   +  F
Sbjct: 467 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRG-VVSTMERF 525

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                              
Sbjct: 526 VAYLIEEYKGAFPTWLA------------------------------------------- 542

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               + I  ++ D+  L   +     L+ AG+RAE+    ++  G +++ A  +  P A+
Sbjct: 543 -PVQMEIIPVNADA-HLDYAKGVQDKLQRAGLRAEVD-DRNEKLGYKIREAQTKKIPYAL 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           + G  E   G + ++        + ++ 
Sbjct: 600 VLGDQEVEAGSVNVRRYGSKDSETMDLD 627


>gi|15606407|ref|NP_213787.1| histidyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|7674070|sp|O67223|HISZ_AQUAE RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|2983619|gb|AAC07188.1| histidyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 383

 Score = 76.8 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 78/435 (17%), Positives = 150/435 (34%), Gaps = 76/435 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++  L  G      +E  +   I      I+E +G+D I     E  +       +    
Sbjct: 1   MKTSLISGERFYSLEESNLVKEIFKKAVKIFEAFGYDYINLSHFEPYEFQELTFGEG--- 57

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           +K   + +D    +   LR D T  + R    +   +  P R Y  G VF  ++ G  + 
Sbjct: 58  SKEAITFKDSYTKESFGLRLDFTTQVVRT-ISHLRNVKLPERVYYFGKVFSLDRRGFEKL 116

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
               Q  V+ +G  +  AD E+  ++ + L+++G+K     +         GI+ K+   
Sbjct: 117 ----QTGVELIGEKSILADFEVIQVLTEFLKSLGLKDLKVIL------SHAGIVRKVADE 166

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            ++        LRA  + +   L+ V     +   + S +         E ++ +  +  
Sbjct: 167 REEL-------LRAFSERNLEALKEVLGNDIKFFVEVSKN--------PEVLNFLEKYDL 211

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              ++ + EL +L++                                   VR   YYTG 
Sbjct: 212 EKEKEELLELGKLLEEFGID-----------------------YAYDLGEVRNFPYYTGV 248

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           ++E            +     ++ GGGRYD L   +  +  PATG ++ + RL+  L   
Sbjct: 249 IFEIY----------ELKSGKALAGGGRYDNLSKIYG-KEYPATGGAVYLERLLDIL--- 294

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                  K +       +D     L        +LR  G +  M +   +   + L YA 
Sbjct: 295 ------PKNVEKKDYFVIDKTKKRLG--LKLADVLREKGKKVGMEIVKERGLEHSLIYAF 346

Query: 426 RRNCPLAIIQGTGER 440
            +     ++    E 
Sbjct: 347 DKGFKEVLLV-EDEI 360


>gi|289806825|ref|ZP_06537454.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 63

 Score = 76.8 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%)

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
               NF  Q   AD+    +A++ G  E + G + +KDL  G++ +    +  +   
Sbjct: 3   HGGGNFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLR 59


>gi|154253644|ref|YP_001414468.1| prolyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|171769681|sp|A7HY28|SYP_PARL1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154157594|gb|ABS64811.1| prolyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 439

 Score = 76.8 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/457 (9%), Positives = 107/457 (23%), Gaps = 58/457 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        + +  +I   +R+  +  G   +  P L+ +D L +     D  
Sbjct: 31  MVRQTAAGIYAWLPLGLAVLRKIEGIVRDEQKRAGAIELLMPTLQSAD-LWRQSGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +  + D   + +                                             
Sbjct: 90  GPEMLRIVDRHERDM----------------------------------LYGPTNEEMIT 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              +  V +                 +     G+ R    +        DG    + + G
Sbjct: 116 DIFRGAVRSYRDLPRNLFHIQWKFRDEIRPRFGVMRGREFLM------KDGYSFDLDVEG 169

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ-GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +   ++ V               +    G    D S +F   A      +      + 
Sbjct: 170 ARRAYRKMFVSYLRSFARMGLKAIPMAADTGPIGGDMSHEFIILAETGESAVFCHRDLVD 229

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           + +     +    +          +      E    + +++   K      RG+E     
Sbjct: 230 MAVPGDDIDYETDL--NPVIAARTDLYAATDEKHDAAKFDAEVPKDKQLSARGIEVGHIF 287

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            +       +      P            DG     +  +       +  + +  +    
Sbjct: 288 FFGTKYSQSMGALVTGP------------DGKEVPVQMGSYGIGVSRLVGAIIEASHDDA 335

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +      V +  +               + L   GI   ++  + +  G +    
Sbjct: 336 GIVWPDAVAPFTVGLINLKSGDAETDAACESIYEKLTAQGIDV-LYDDTDERAGAKFSNM 394

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           D    P  ++ G      G +++K  A G++     +
Sbjct: 395 DLIGLPWQLVIGPRGLKSGTVELKRRATGEKEELSPE 431


>gi|14590578|ref|NP_142646.1| threonyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|8928366|sp|O58430|SYT_PYRHO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3257107|dbj|BAA29790.1| 625aa long hypothetical threonyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 625

 Score = 76.8 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/226 (10%), Positives = 61/226 (26%), Gaps = 12/226 (5%)

Query: 260 KGTIAGEKGFNEL--VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP--- 314
           +      +   +        +V         + I     R   +     +  +       
Sbjct: 382 EDYEVAIRFTEDFWKENRDFIVELVKIIGKPVLIEMWKQRFFYFILKFEFNFVDNLDKAA 441

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL------ESS 368
            ++  Q  V      G   YD          +  +        +   L+           
Sbjct: 442 ALSTVQIDVENAERFGIKYYDENGEEKYPLILHCSPSGAIERVMYAILEKQAKLMQEGKK 501

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                 + P+ +  +    + L         L  A IR ++     +    +++ A++  
Sbjct: 502 PMLPLWLSPIQVRVIPVSEEYLDYALYIAGKLEGARIRVDVD-DEDERLNKKIRRAEKEW 560

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            P  ++ G  E+  G + ++    GK+    ++      + +V   
Sbjct: 561 IPYIVVVGAKEKESGTITVRRREDGKQYETRLEELIKEIKEKVEGF 606


>gi|83858393|ref|ZP_00951915.1| prolyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83853216|gb|EAP91068.1| prolyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 442

 Score = 76.8 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 59/460 (12%), Positives = 123/460 (26%), Gaps = 63/460 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  +I   +R   +  G   +  P L+ +D L +     D  
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLRKIEKIVREEQDRAGAIELLMPTLQPAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            K +  + D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GKEMLRIVDRHERDLLYGPTNEEMITEIFRGYCRSYKDLPK--ILYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S     +  +       +  +          +  R     I  K+ 
Sbjct: 148 GVMRGREFLMKDAYSFDLDYEGAVKAYNKMFVAYLNTFARMGLKSVPMRADTGPIGGKL- 206

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                              L + G   V                  + L        V F
Sbjct: 207 -------------SHEFIILAETGESEV---------------FCDSRLVDMPAPGEVDF 238

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              DL+  + +   L   T              E+   + + +   +      RG+E   
Sbjct: 239 -DGDLQPYVDQRTALYAATE-------------EMHDAARFEAEVPEERRLSARGIEVGH 284

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +      P+  +   P    +    G Y   VSR  G  + A+              
Sbjct: 285 IFNFGTKYSDPMKAQVAGPDGKETAVHMGSYGVGVSRLLGAIIEASH------------D 332

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                           +  M       +K        L  AG+   +   ++ + G +  
Sbjct: 333 ENGVIWPEAVAPFGAGVINMRAGDADCAKAADEIYTKLDAAGLEPLLD-DTAASAGAKFA 391

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             D    P  +I G      G  ++K  A G+     +++
Sbjct: 392 TMDLIGVPYQVIVGPRGLKEGKAEVKIRASGERHELSLED 431


>gi|312173833|emb|CBX82087.1| Histidyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 421

 Score = 76.8 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 70/448 (15%), Positives = 131/448 (29%), Gaps = 59/448 (13%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             LP+GF     K + +  + L  +  I  + G++ +  P L +  + G+     +    
Sbjct: 9   LRLPKGFHVRGEKYLDVYLKSLLRLTEISRSCGYESVVLPSLGFQSTFGRAA---NVLGD 65

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
             F   D  G+ + +  D TA L R+ AE   T+    +     PVFR        F Q 
Sbjct: 66  KTFEFLDRKGRNVLMSPDSTAGLLRWHAE-SRTMNDCSKIGWFAPVFRYRNVENRGFHQI 124

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
               ++   +  +                      D+ +   +  +LD I   +   G  
Sbjct: 125 GFSAINWFHNPQDI---------------------DWPLIDLSNNLLDLIRGVLDEPGSV 163

Query: 189 KLNERLIVLRAIDKL--DKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           K+N    + R I  L       + +  L+ E  T    +    +   S++   ++S    
Sbjct: 164 KINNVGAIKRTITSLLSLSDSKELIAKLMKEKSTAGKIELLTVSLPDSDEKLALLSIFGA 223

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                          T    +   ++   ++ ++      ++I  +   +   E  +G  
Sbjct: 224 TA-------RLNKGATNLVLEMQKDMHNFADKLKNV----DKIDFALDNLHSSEIVSGIG 272

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            E                   +G GGRYD     F  +         GI      + S  
Sbjct: 273 IEFYTANGA-----------RIGDGGRYDEYAKIFDSRCQTLVSVCSGIEAFFRNINSYN 321

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                      + I         L         LR   IR E      K     +    +
Sbjct: 322 ----EPHPNIDLAIICFPEAQSLLKDC---VYQLRNKNIRVEEIPLLGK-IKGAISKM-K 372

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           +      I G  E       + + + G 
Sbjct: 373 QKAKYYCIIGNDEMRDAHFIVHN-STGD 399


>gi|170106602|ref|XP_001884512.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164640423|gb|EDR04688.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1559

 Score = 76.8 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 62/477 (12%), Positives = 131/477 (27%), Gaps = 57/477 (11%)

Query: 20   TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
             +   + + + D +  I+  +G   +E P       L   L  ED  ++   +  D  G 
Sbjct: 971  PEHASLNDTVQDRLAAIFHLHGAVAMEPP------LLMPVLDPEDEKSRA--TFVDRHGD 1022

Query: 80   WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
             ++L  ++  P AR  A      +                   G  R       D +   
Sbjct: 1023 VVTLPNNILVPFARLAARGNIKRIK----RYHITNIYRPNPVAGHPRVSKAAIFDIITQD 1078

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
              +        +            +     +       I+E           +R  V+  
Sbjct: 1079 LGSGLVAAGAEIIAIANNCLNSFPNLSQNYDIHISHSSIVE--LTMSRVPAGQRDAVVEI 1136

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
            I++      Q   LLL +G   ++ +  +  + T + ID ++S L       +       
Sbjct: 1137 INQSKSLPTQKRALLLKKGLLRSTAEELEILSETDDDIDDVLSRLEKVSPALLS------ 1190

Query: 260  KGTIAGEKGFNELVVISEL-VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
                  +   +E+    +  +                     +  G + E +      + 
Sbjct: 1191 ----LLQPAVDEVKATLQFALSAGVTRQIYFHPLMLGSHHTHFKDGVIVEIVRKNKHTD- 1245

Query: 319  KQKPVVFGSVGGGGRYDG----LVSRFKGQNVPATGFSIGISRLIVALKS---------- 364
                     +  GGRYD          +   + A G  I + ++ +AL S          
Sbjct: 1246 --------VLAAGGRYDNLITRYSPLKQKSEICAMGLQIAVEKITMALASFQGASVKTLV 1297

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF-----GN 419
             E  +          +  + +    L         L    I A++   S          +
Sbjct: 1298 KEGRSFGFWSPRRCDVYVVSYHPGYLQDRLEVVAYLWQHNISADIMYESG--LPEADHES 1355

Query: 420  QLKYADRRNCPLAIIQGTGERSRG--MLQIKDLAKGKELSREIKNNESWREARVAQI 474
             +   +R      +        R     ++K + KG E     +    W +  +A+ 
Sbjct: 1356 HVDLCEREGILFTVYPRPRTGRRDHPAFKVKSILKGTEYELSRQELVGWLQHHIAEQ 1412


>gi|149186565|ref|ZP_01864877.1| ATP phosphoribosyltransferase [Erythrobacter sp. SD-21]
 gi|148829792|gb|EDL48231.1| ATP phosphoribosyltransferase [Erythrobacter sp. SD-21]
          Length = 370

 Score = 76.8 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 72/202 (35%), Gaps = 8/202 (3%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   L   LP G  D          R +  I    +++G+D +  PL+E+  SL    
Sbjct: 1   MTKPDDL---LPIGLEDALPVRASTITRTMRDILLAMDSHGYDRVRPPLIEFEQSLA--G 55

Query: 61  PDEDRPNKGVFSLQDDDG-QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             E    + +    D +  + ++LR D+T  + R  A        P R    G +   + 
Sbjct: 56  RMEGVATRRMVRFTDPESLRTLALRADMTVQVGRIAATGLADAPRPLRLCYAGDIALLKA 115

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                 RQ +Q   + +G     A  E   +  D LEA G+      +      ++D + 
Sbjct: 116 DQLDPARQRLQLGAELIGRGNVAAAVEAVTVALDALEAAGVTG--LSVDFTLPDLVDTLA 173

Query: 180 EKIGLHGDDKLNERLIVLRAID 201
           EK     D K       L   D
Sbjct: 174 EKALPLADHKREAVRRELDMKD 195


>gi|118575454|ref|YP_875197.1| threonyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|166223332|sp|A0RU76|SYT_CENSY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118193975|gb|ABK76893.1| threonyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 615

 Score = 76.4 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/253 (11%), Positives = 68/253 (26%), Gaps = 1/253 (0%)

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           +     + A +  E    ++  L +D       +    +          E+V        
Sbjct: 345 DMAQAVREAGVRFELSRDVIGQLGLDAADYEMAIRLTEEFYAENGGAVREMVRRHGRPVL 404

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
                 R                    A+    +  E  K      V         V   
Sbjct: 405 VEMWKERFFYFVLKWEFNYIDGAGKASALSTDQIDVENGKRYGIEFVDENNGRQHPVILH 464

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
              +         +     A  +  +       + PV    +    + +       + + 
Sbjct: 465 NSPSGAIERVIYTLLEKAAADSARGTKPELPLWLSPVQARIIPVGEELVRNATELAKEMA 524

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             GIRA++    +++ G +++ A++      ++ G  E + G L ++D   GK     + 
Sbjct: 525 GHGIRADVD-DRNESMGKRIREAEKEWVRYILVVGEKEAASGRLSVRDRRTGKSTEMGLD 583

Query: 462 NNESWREARVAQI 474
           +       + A  
Sbjct: 584 DLVEAVREQTAGK 596


>gi|296111759|ref|YP_003622141.1| histidine--tRNA ligase (putative) [Leuconostoc kimchii IMSNU 11154]
 gi|295833291|gb|ADG41172.1| histidine--tRNA ligase (putative) [Leuconostoc kimchii IMSNU 11154]
          Length = 534

 Score = 76.4 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 68/400 (17%), Positives = 136/400 (34%), Gaps = 52/400 (13%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           +   P G  D   + +  + +I   I        F  I TPL+E      ++        
Sbjct: 4   KILAP-GSHDEFGETLVQKQQICHVISTTLNAKNFTAINTPLIERESVFEQY------QQ 56

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
             VF L+D  G+ + LR DLT P+AR+++          + Y IG VFR   +  G + Q
Sbjct: 57  GNVFHLRDQVGENLVLRPDLTLPIARFLSS-KVQQEKTHQFYYIGDVFRRTNYLSGEYNQ 115

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             Q  ++ +G ++  A+     +M D  +  G    D  + I++ +++D +L  + +   
Sbjct: 116 ETQAGIELIGDASFNAEMAALDIMLDFAQQFG--IADVQVVISDTRLIDRVLNTLDISKI 173

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           ++                         L +   D +         T +     +    + 
Sbjct: 174 EQAA-----------------------LKQAIEDKNMTAFDKIQRTIKNFPENLKRWPLA 210

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             +    +   ++            + ++  + +  Y    + +         YYTG + 
Sbjct: 211 FGEDGETVMWQLQDLPEVNDIVERWLQLAAFIHER-YPDVAVTVDLAASSPQAYYTGTII 269

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +                +  GGRYD L+  F+ Q +PA G  + I  ++        
Sbjct: 270 RGFVPSLG----------RYLFSGGRYDSLLENFQNQQLPAVGMGLNIDTIMA------D 313

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                 +  PV    +      + +       L++AGI  
Sbjct: 314 WRREAVDHKPVEPIVVVLAKGRVEQATRPL--LKSAGIDT 351


>gi|254831960|ref|ZP_05236615.1| threonyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 640

 Score = 76.4 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 61/448 (13%), Positives = 131/448 (29%), Gaps = 81/448 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E               
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAEL-------------G 359

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 360 MMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDIKDY 416

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   + E + +
Sbjct: 417 SFRLSYRDPKNT----------EKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEGEAAFY 466

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++   I       R +  + G V   +  F
Sbjct: 467 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRG-VVSTMERF 525

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                              
Sbjct: 526 VAYLIEEYKGAFPTWLA------------------------------------------- 542

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               + I  ++ D+  L   +     L+ AG+RAE+    ++  G +++ A  +  P A+
Sbjct: 543 -PVQMEIIPVNADA-HLDYAKGVQDKLQRAGLRAEVD-DRNEKLGYKIREAQTKKIPYAL 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           + G  E   G + ++        + ++ 
Sbjct: 600 VLGDQEVEAGSVNVRRYGSKDSETMDLD 627


>gi|326693745|ref|ZP_08230750.1| threonyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 654

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/463 (12%), Positives = 119/463 (25%), Gaps = 85/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G          IR ++   I +     G+  + TP+L   +   K     D   + +F 
Sbjct: 265 SGLPVWLPNGATIRRQVERYITDKELANGYQHVYTPVLSNLNLY-KTSGHWDHYREDMFP 323

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+++ LR                        ++  P    E          +  
Sbjct: 324 PMDMGDGEFLELRP--------------MNCPSHIMVFKHKPRSYRELPIRIAELGMMH- 368

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A   +  +   TL           +    + IL  ++E      D  + 
Sbjct: 369 -----RYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMEVYR---DFNIT 420

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D+       A L     D+ + +   + E +
Sbjct: 421 DYRFRLSYRDPKNT----------EKYFDDDEMWEKSQAQLKRAMDDLGLDYYEAEGEAA 470

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    +N   I                +   + 
Sbjct: 471 FYGPKLDVQTKTALGNEETMSTIQLDFLLPERFNLTYIGADGQDNHRPVMLHRGIVGTME 530

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 531 RFTAYLIEMYKGAFPTWLA----------------------------------------- 549

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  ++  +   +  +   + L+ AG+RA +    +K  G  ++ A     P 
Sbjct: 550 ---PLQVQIIPVNLGAHG-AYAEQIKKQLQDAGLRANVETKDAK-MGYLIREAQTNKIPY 604

Query: 432 AIIQGTGERSRGMLQIKDLAKGKE--LSREIKNNESWREARVA 472
            ++ G  E     + ++    G+E   +  I + ++   A VA
Sbjct: 605 TLVLGDSEVEGQTVTVR--KYGEEKTTTMPIADFQAEILADVA 645


>gi|312372196|gb|EFR20211.1| hypothetical protein AND_20488 [Anopheles darlingi]
          Length = 1658

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 67/486 (13%), Positives = 143/486 (29%), Gaps = 57/486 (11%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
            +   + +   +  ++  +G   + TPLL       K      +       L    G  ++
Sbjct: 1027 LSRFDYVKARLIALFRKHGAIEVVTPLLTP---FTK-----HQARSNTVRLMTHSGSIVT 1078

Query: 83   LRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            L  DL  P  R+VA N    +               N              D+    +  
Sbjct: 1079 LPEDLRIPFLRHVALNGIRYIRRYSIGRVYREKKVFNFHPK---QVHECAFDIVTPTTGQ 1135

Query: 141  ETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGLHGDDKLNERLIVLRA 199
               DAE+  + +D L  + + +N      IN+  +L  +L    +  D      L  L  
Sbjct: 1136 LITDAELLAIASDVLRELNLLQNRNVFFRINHTGLLRALLLHCCVPEDK--YRELFELVY 1193

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
                DK     +  L+       +G      +   E + + +    +        +    
Sbjct: 1194 EFLEDKISKFQLYSLINAHIGGGTGSKAVNVSYLCEALQLEMPVGQLGGTLLKTIIRGKT 1253

Query: 260  KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
            +     +    EL ++  L +  G    +  ++      + Y        +       + 
Sbjct: 1254 EHATLAKVAVRELELVITLAQNMG---VQCAMNVCPALPVNYEGAKRGGIVWQLLAELKP 1310

Query: 320  QKPVVFGSVGGGGRYDGLVSRFK----GQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
            ++     ++  GGRYD  +  F+       +P     +  +        L ++       
Sbjct: 1311 KRKNPLTTIAVGGRYDSKLDEFQKSGLNNGLPVPKVDLHGAGFSFLFDKLVNAIAPSSGY 1370

Query: 376  GPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRA---EMFLGSSKN----FGNQLKYADRR 427
             P+ +      S   L +     + L + GI+    E    S  +     G         
Sbjct: 1371 EPIEVMICVTGSRPQLKEVATILRPLWSNGIKTGVIESSSTSGGSAVDDLGK------EA 1424

Query: 428  NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
               + ++ G G    G L+++                SW   R  +  +   +L++ + K
Sbjct: 1425 GAKIVVLIGDG----GELRVR----------------SWDHDRFQERHVTRPDLIAYILK 1464

Query: 488  ILQENK 493
              +   
Sbjct: 1465 TFRSEG 1470


>gi|110681187|ref|YP_684194.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter
           denitrificans OCh 114]
 gi|109457303|gb|ABG33508.1| histidyl-tRNA synthetase,-like protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 360

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 64/352 (18%), Positives = 116/352 (32%), Gaps = 37/352 (10%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVA 96
           +E  G   IETP+L+ +++L     +E R    V S      Q   LR D T P+   V 
Sbjct: 18  FEAAGAQRIETPVLQPAEALLDLYGEEIRARAYVTSDALRGEQM--LRPDFTVPV---VQ 72

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL- 155
            +      P R    G VFR ++H P R  ++ Q   +        A       + +T+ 
Sbjct: 73  MHMAHGAEPARYTYAGEVFRRQEHDPSRANEYFQVGYEVFDRENPAAADAEVFCLFETVL 132

Query: 156 --EAVGIKRNDYHIGINNRKILD-------GILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
               +     D  I     + L         +L  I      +        R      + 
Sbjct: 133 SPLRLRAATGDIGILTAAVRGLRTTDARKSALLRHIWRPRRFRSLLDRYAGRIKPSKQRL 192

Query: 207 GL---------QGVKLLLGEGRTDNSGDFTKG----ANLTSEQIDIMVSFLSID--LEKS 251
            L           +     +   D            A L+  ++D++ + +++   +  +
Sbjct: 193 ELLAGRAAAPDAPLIGKRSQSEIDARIALLHADAATAPLSETEVDLLDALVNVRETMPFA 252

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           + +L +L     + E+    L   +E + K G + + +   ++  R          E   
Sbjct: 253 VQQLRDLAVDMPSIEQAVARLSDRAEALAKRGVDVDALPFEASYGR-------TSMEYYD 305

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           GF       K     +V  GGRYD L  R            +    L++ L+
Sbjct: 306 GFVFGYYHPKRHDLPAVATGGRYDALTRRLGEGAEIPAVGGVIRPDLMLMLE 357


>gi|16800662|ref|NP_470930.1| threonyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|22654125|sp|Q92BF5|SYT_LISIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|16414081|emb|CAC96825.1| threonyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|313618753|gb|EFR90658.1| threonyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 640

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/448 (13%), Positives = 130/448 (29%), Gaps = 81/448 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E               
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAEL-------------G 359

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 360 MMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDIKDY 416

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   + E + +
Sbjct: 417 SFRLSYRDPKNT----------EKYFDDDAMWEKAQAMLKSAMDEMNMDYFEAEGEAAFY 466

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++   I       R +  + G V   +  F
Sbjct: 467 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRG-VVSTMERF 525

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                +A   +E    N  
Sbjct: 526 VAYLIEEYKGAFPTW-------------------------------LAPVQMELIPVNAD 554

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                           L   +     L+ AG+RAE+    ++  G +++ A  +  P A+
Sbjct: 555 AH--------------LDYAKGVQDKLQRAGLRAEVD-DRNEKLGYKIREAQTKKIPYAL 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           + G  E   G + ++        + ++ 
Sbjct: 600 VLGDQEVEAGSVNVRRYGSKDSETMDLD 627


>gi|162139874|ref|YP_745105.2| prolyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|148887022|sp|Q0BSM0|SYP_GRABC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 440

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/449 (10%), Positives = 112/449 (24%), Gaps = 55/449 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ N I + +R+     G   +  P ++ +D L +     D     +  L
Sbjct: 38  GIYAWLPAGLRVLNAIANIVRDEQAGIGAQEVLMPTIQSAD-LWRESGRYDAYGPEMLRL 96

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D   + +                                   NE+     +R  ++   
Sbjct: 97  KDRHERDLLYGP------------------------------TNEEVITDIYRHSVKSYR 126

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           +               +     + +  +           K                    
Sbjct: 127 EL--------PQMAYQIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDYAGAVRSYRRIM 178

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  +R   +L    +  +    G    D S +F   A     ++    +F  ID      
Sbjct: 179 LSYMRTFQRLGVKAI-PMLADTGPIGGDLSHEFIILAPTGESEVFYDAAFEEIDW----- 232

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                  G         +L    + +      ++    ++      E          +G 
Sbjct: 233 ------SGASFNVDSDADLERFFQTITGHYAATDEKHDTAAYEALPEARRRTGRGIEVGH 286

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                 +          G   DG     +  +       +  + +  +         +  
Sbjct: 287 IFYFGTKYSKALNMTVAGR--DGQKLHPEMGSYGIGVSRMVAAVIEASHDEAGIIWPDSI 344

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +  + +   +           R  G+R  ++    +  G +   AD    P  +
Sbjct: 345 APFRAAVLNLKNGDAACDAMAEDVY--RRIGVRHALYDDRDERAGVKFADADLMGHPWQV 402

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKN 462
           + G    + G +++K    G+ +   +++
Sbjct: 403 VIGPRGAAAGRVELKRRRTGERVELTVED 431


>gi|90417824|ref|ZP_01225736.1| prolyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337496|gb|EAS51147.1| prolyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 440

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/466 (12%), Positives = 120/466 (25%), Gaps = 71/466 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+ +++   IR      G   +  P ++ +D L +     +  
Sbjct: 31  MIRQQAAGLYSFLPLGKRVLDKVCAIIREEQNRSGAIELLMPTIQSAD-LWRESGRYEDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
            K +  ++D  G+ +       ++   + R     +  +       +             
Sbjct: 90  GKEMLRIEDRHGRDLLYGPTNEEMITDIFRSYVRTYKDLPLNLYHLQWKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR-KILDGI 178
                F        D    +++ A   M +    T E  G+K              L   
Sbjct: 150 MRSREFLMKDAYSFDLDYDNSKIAYDRMFVAYLRTFERCGLKAIPMRADTGPIGGELSHE 209

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
              +   G+ ++                     +  L         DF   A L      
Sbjct: 210 FIVLASTGESEVFCH------------------RDYLDLAVPCEGVDFDDAAGL------ 245

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                             E+VK         +E+   +   + +  +           RG
Sbjct: 246 -----------------AEIVKAWTTPYAATDEMHETATWDQLAEDDK-------LAARG 281

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           +E      +      P+      P            DG        +       +  + +
Sbjct: 282 IEVGHIFHFGTKYSEPMKAVVTGP------------DGKDVPVHMGSYGIGPSRLLAAII 329

Query: 359 IVALKSLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
             +                V +  M   D+D  +  +   + ++ AGI   ++       
Sbjct: 330 EASHDENGIIWPKSVAPFDVGLINMKPGDADCDAACEDLYRQMQAAGIDV-LYDDQDTRA 388

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G +    D    P+ +I G      G  +IK  A G+  S  + + 
Sbjct: 389 GAKFASMDLIGLPMQVIVGPRGAKAGEAEIKLRATGERQSLPLSSV 434


>gi|254828206|ref|ZP_05232893.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600595|gb|EEW13920.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 640

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/448 (13%), Positives = 130/448 (29%), Gaps = 81/448 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E               
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAEL-------------G 359

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 360 MMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDITDY 416

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   + E + +
Sbjct: 417 SFRLSYRDPKNT----------EKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEGEAAFY 466

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++   I       R +  + G V   +  F
Sbjct: 467 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRG-VVSTMERF 525

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                +A   +E    N  
Sbjct: 526 VAYLIEEYKGAFPTW-------------------------------LAPVQMELIPVNAD 554

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                           L   +     L+ AG+RAE+    ++  G +++ A  +  P A+
Sbjct: 555 AH--------------LDYAKGVQDKLQRAGLRAEVD-DRNEKLGYKIREAQTKKIPYAL 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           + G  E   G + ++        + ++ 
Sbjct: 600 VLGDQEVEAGSVNVRRYGSKDSETMDLD 627


>gi|194290784|ref|YP_002006691.1| prolyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|226699135|sp|B3R894|SYP_CUPTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|193224619|emb|CAQ70630.1| prolyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 573

 Score = 76.4 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 58/564 (10%), Positives = 131/564 (23%), Gaps = 102/564 (18%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++ + +R      G   +  P+++ ++ L +     D+ 
Sbjct: 31  MIKKLGAGIYNYMPIGLRVIRKVENIVREEMNRAGAVELSMPVIQPAE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  L+D   +  +++    ++   +AR    ++  +       +             
Sbjct: 90  GPELLRLKDRHERDFAVQPTSEEVVTDIARSEIRSYKQLPVNFYQIQTKFRDERRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK-------------RNDYH 166
                F        D        +   M           G++                + 
Sbjct: 150 MRGREFTMKDAYSFDRDTDGLRKSYENMYDAYVRIFRRFGLEFRAVAADNGAIGGSGSHE 209

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
             +      D I+            E    L  + +        VK    E         
Sbjct: 210 FHVIAETGEDAIV-YCPTSAYAANMEAAEALPLVAERAAPTQDLVKTFTPEKVKCEQVAE 268

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSM------HELYELVKGTIAGEKGFNELVVISELVR 280
                L +    I+++  S    +              VK +             +E+V 
Sbjct: 269 FLNIPLETNVKSIVLATDSDAGPQIWLLLIRADHELNEVKASKVPGLAEFRFATENEIVE 328

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV------------ 328
             G     +                V          N +       +             
Sbjct: 329 AFGSPPGYLGPIDMKKPVKVVADRTVANMSDFVCGANYRDYHYTGVNWGRDLPEPIVADL 388

Query: 329 ----GGGGRYDGLVSRFKGQ-----NVPATGFSIGISRLIVALKSLESSTNNIKEMG--- 376
                G    DG  +    +     +V   G     S     L     +           
Sbjct: 389 RNVVAGDASPDGQGTLEICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPMQMGCYGIG 448

Query: 377 ---------------------------PVLITTMDHD--SDSLSKYQMYTQMLRTAGIRA 407
                                       V+I  + +D      ++       L  AG+  
Sbjct: 449 ITRILGAAIEQNFDERGIIWPAAIAPFAVVICPVGYDRSEAVKAEADRIHAELLAAGVDV 508

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            +     +  G      +    P  ++ G      G +                    ++
Sbjct: 509 ILD-DRGERPGVMFADWELIGVPHRVVVGDRGLKEGKV-------------------EYQ 548

Query: 468 EARVAQIT-IPISELVSTVKKILQ 490
             R AQ T + ++E+V  V+ +L 
Sbjct: 549 GRRDAQATAVSVAEVVGHVRSLLA 572


>gi|295399484|ref|ZP_06809466.1| threonyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109958|ref|YP_003988274.1| threonyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978950|gb|EFG54546.1| threonyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215059|gb|ADP73663.1| threonyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 644

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 61/480 (12%), Positives = 136/480 (28%), Gaps = 101/480 (21%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  I   I +     G+  + TP+L   +   K     D   + +F  
Sbjct: 265 GLPLWLPKGATVRRIIERYIVDKEIELGYQHVYTPVLGSVELY-KTSGHWDHYKENMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEQLVLRPMNCP-------HHMMIYKNKIHSYRELPIRIAELGTMHRYEMS----- 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    I      I    +++++ ILE     G D+ + R
Sbjct: 372 --------GALSGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKDFGLDEYSFR 423

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L      DK   +    +     E       +      L   + +   +F    L+    
Sbjct: 424 LSYRDPHDKEKYYDDDEM----WEKAQSMLREAMDELGLEYYEAEGEAAFYGPKLDV--- 476

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           ++   +           + ++  E    +    +       ++      T   + A L  
Sbjct: 477 QVRTALGKDETLSTVQLDFLLP-ERFDLTYIGEDGKPHRPVVIHRGVVSTMERFVAFLIE 535

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                 +    F +                                              
Sbjct: 536 ------EYKGAFPTWLA------------------------------------------- 546

Query: 374 EMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
              PV +  +    ++ L       + L++ G R E+  G  +  G +++ A  +  P  
Sbjct: 547 ---PVQVEVIPVSPEAHLDYAYKVKETLQSQGFRVEVD-GRDEKIGYKIREAQIQKIPYM 602

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           ++ G  E +   + ++    G++ S                 T+ +++ ++ +K  ++ N
Sbjct: 603 LVVGDKEMAENAVNVR--KYGEQKS----------------ETMALADFIAALKAEVRRN 644


>gi|294791808|ref|ZP_06756956.1| proline--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294793669|ref|ZP_06758806.1| proline--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455239|gb|EFG23611.1| proline--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294457038|gb|EFG25400.1| proline--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 572

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/530 (11%), Positives = 128/530 (24%), Gaps = 79/530 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G         R   +I   +R   +      I  P+L+ ++   K  
Sbjct: 26  MLRAGFMR-KTANGLYSFLPLGWRSIKKIEAIVREEMDRASAQEIMMPILQPAEI-WKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGP 113
              +     +  + D       L     ++   L +    ++  +          +R   
Sbjct: 84  GRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDER 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK------------ 161
             R        F        D   +  + +   M           G+             
Sbjct: 144 RPRYGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDAYTRIFTRCGLTFRPVEADSGAIG 203

Query: 162 ------------RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQ 209
                         +  I    +      +E        +  E L  L  +D  +   ++
Sbjct: 204 GSGTHEFMAIAEAGEADIVYCTKCDYAANIEIGKPGIMKQDEEVLHELSVVDTPNASSIE 263

Query: 210 GVKLLLG----------------------------------EGRTDNSGDFTKGANLTSE 235
            V  +L                                   +     + +         E
Sbjct: 264 AVADMLNLPLHKTIKAVVFSIDGKVVLAIVRGDHEVNEVAVQHAVLGAVEPEMATPEELE 323

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           ++ ++  F+S    K   E   +V  ++             +    +        +   I
Sbjct: 324 KVGLIAGFISPIGLKQTEEFAIVVDESVMETYNVCGGANKKDAHYVNINPKRDFNVEDII 383

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG---GGRYDGLVSRFKGQNVPATGFS 352
           V  +   T        G  + + K   V      G               G+  P     
Sbjct: 384 VAPIRLITKDDVCPKCGGALEHAKGIEVGQVFKLGTKYSEALQATFLDQNGRPNPMIMGC 443

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMD--------HDSDSLSKYQMYTQMLRTAG 404
            GI        ++E   +    + P  I   +         D   +S  Q     L+ AG
Sbjct: 444 YGIGVSRTLAAAIEQYHDENGIIWPRSIAPFEAVIVPINAKDEALMSTSQTIYTALQNAG 503

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           +   +     +  G + K AD    PL I           ++I+    G+
Sbjct: 504 VDVLLDDRKDRA-GVKFKDADLIGYPLRITVSKNTLENNEVEIQIRKSGE 552


>gi|47096724|ref|ZP_00234309.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898274|ref|ZP_05258198.1| threonyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912233|ref|ZP_05262245.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936561|ref|ZP_05268258.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014908|gb|EAL05856.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609155|gb|EEW21763.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590208|gb|EFF98542.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 640

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/448 (13%), Positives = 131/448 (29%), Gaps = 81/448 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E               
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAEL-------------G 359

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 360 MMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDIKDY 416

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   + E + +
Sbjct: 417 SFRLSYRDPKNT----------EKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEGEAAFY 466

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++ + I       R +  + G V   +  F
Sbjct: 467 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLSYIGEDGEKHRPVVIHRG-VVSTMERF 525

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                +A   +E    N  
Sbjct: 526 VAYLIEEYKGAFPTW-------------------------------LAPVQMELIPVNAD 554

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                           L   +     L+ AG+RAE+    ++  G +++ A  +  P A+
Sbjct: 555 AH--------------LDYAKGVQDKLQRAGLRAEVD-DRNEKLGYKIREAQTKKIPYAL 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           + G  E   G + ++        + ++ 
Sbjct: 600 VLGDQEVEAGSVNVRRYGSKDSETMDLD 627


>gi|114316122|gb|ABI62182.1| prolyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 499

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/449 (10%), Positives = 112/449 (24%), Gaps = 55/449 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ N I + +R+     G   +  P ++ +D L +     D     +  L
Sbjct: 97  GIYAWLPAGLRVLNAIANIVRDEQAGIGAQEVLMPTIQSAD-LWRESGRYDAYGPEMLRL 155

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D   + +                                   NE+     +R  ++   
Sbjct: 156 KDRHERDLLYGP------------------------------TNEEVITDIYRHSVKSYR 185

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           +               +     + +  +           K                    
Sbjct: 186 EL--------PQMAYQIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDYAGAVRSYRRIM 237

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  +R   +L    +  +    G    D S +F   A     ++    +F  ID      
Sbjct: 238 LSYMRTFQRLGVKAI-PMLADTGPIGGDLSHEFIILAPTGESEVFYDAAFEEIDW----- 291

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                  G         +L    + +      ++    ++      E          +G 
Sbjct: 292 ------SGASFNVDSDADLERFFQTITGHYAATDEKHDTAAYEALPEARRRTGRGIEVGH 345

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                 +          G   DG     +  +       +  + +  +         +  
Sbjct: 346 IFYFGTKYSKALNMTVAGR--DGQKLHPEMGSYGIGVSRMVAAVIEASHDEAGIIWPDSI 403

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +  + +   +           R  G+R  ++    +  G +   AD    P  +
Sbjct: 404 APFRAAVLNLKNGDAACDAMAEDVY--RRIGVRHALYDDRDERAGVKFADADLMGHPWQV 461

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKN 462
           + G    + G +++K    G+ +   +++
Sbjct: 462 VIGPRGAAAGRVELKRRRTGERVELTVED 490


>gi|218884527|ref|YP_002428909.1| threonyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218766143|gb|ACL11542.1| threonyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 614

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/388 (10%), Positives = 97/388 (25%), Gaps = 9/388 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +                +            F     +      +       +     L  
Sbjct: 216 HMRYGPHATVIMEAVMRYSWMVAQSLGIPVFKVMGSNMFNLKEKPVYEHAVLFGDR-LYE 274

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
           V +  + + +          +L    +   D       V  +  +L++ G   +   L +
Sbjct: 275 VQLDEDRFILRYAACHQQFAMLRDWVISYKDLPFGVFEVADSY-RLEQRGELALCFRLRK 333

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN----ELV 273
               +    T+      +    + + +  +  K+      L   T    + +     E V
Sbjct: 334 FYMPDLHILTRNIGEAIDVSMRVQAKIHEEAGKAGRSYVALYNITDEFLEKYRDKLVEFV 393

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
              +         + I      V             I  F +     +      V   G 
Sbjct: 394 KREKYPVLLAVIPSGIYYWVLNVEYHIIDNLKRPREIATFQIDVGNGRRFNIAYVDEKGE 453

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
               V            +   +      +++   +      M PV +  +    +     
Sbjct: 454 KHHPVIIHTALLGGVERYIYMVLDTGALIEASGQTPYIPTWMSPVQVRIVPVSKEYNEHA 513

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 + + G R ++     +  G +++ A +   P  I+ G  E + G + I+     
Sbjct: 514 FKIAGEILSHGFRVDVD-DRDETLGKKIRDAGKEWIPYIIVVGEREVNTGTINIRVRRSN 572

Query: 454 KELSREIKNNESWREARVAQITIPISEL 481
            +   +++      E  V     P  E+
Sbjct: 573 DQRVMKLEEFIKLLEEEVKGY--PRVEM 598


>gi|46907789|ref|YP_014178.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093096|ref|ZP_00230873.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|217964294|ref|YP_002349972.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|226224160|ref|YP_002758267.1| threonyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254824382|ref|ZP_05229383.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852182|ref|ZP_05241530.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931499|ref|ZP_05264858.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|255520160|ref|ZP_05387397.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|290893960|ref|ZP_06556936.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|300764775|ref|ZP_07074765.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461796|sp|Q71ZA9|SYT_LISMF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783526|sp|B8DHI9|SYT_LISMH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516560|sp|C1KVK6|SYT_LISMC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46881058|gb|AAT04355.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018536|gb|EAL09292.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|217333564|gb|ACK39358.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|225876622|emb|CAS05331.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605487|gb|EEW18095.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|290556498|gb|EFD90036.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|293583051|gb|EFF95083.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293593617|gb|EFG01378.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514451|gb|EFK41508.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|307571140|emb|CAR84319.1| thrS [Listeria monocytogenes L99]
 gi|313608610|gb|EFR84472.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
 gi|328465594|gb|EGF36823.1| threonyl-tRNA synthetase [Listeria monocytogenes 1816]
 gi|332312001|gb|EGJ25096.1| Threonyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 640

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/448 (13%), Positives = 130/448 (29%), Gaps = 81/448 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E               
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAEL-------------G 359

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    +      I    +++++ ILE      D  + + 
Sbjct: 360 MMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYK---DFDIKDY 416

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D  +            +   D++      A L S   ++ + +   + E + +
Sbjct: 417 SFRLSYRDPKNT----------EKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEGEAAFY 466

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                V+   A  K      V  + +    ++   I       R +  + G V   +  F
Sbjct: 467 GPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRG-VVSTMERF 525

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++    F +                                +A   +E    N  
Sbjct: 526 VAYLIEEYKGAFPTW-------------------------------LAPVQMELIPVNAD 554

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                           L   +     L+ AG+RAE+    ++  G +++ A  +  P A+
Sbjct: 555 AH--------------LDYAKGVQDKLQRAGLRAEVD-DRNEKLGYKIREAQTKKIPYAL 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           + G  E   G + ++        + ++ 
Sbjct: 600 VLGDQEVEAGSVNVRRYGSKDSETMDLD 627


>gi|306841942|ref|ZP_07474620.1| prolyl-tRNA synthetase [Brucella sp. BO2]
 gi|306287975|gb|EFM59383.1| prolyl-tRNA synthetase [Brucella sp. BO2]
          Length = 400

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 65/449 (14%), Positives = 122/449 (27%), Gaps = 67/449 (14%)

Query: 20  TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
              +++ N++   IR      G + I  P ++ +D L +     D   K +  +QD   +
Sbjct: 2   PIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRIQDRQER 60

Query: 80  WISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQFIQCDV 133
            +       ++   + R    ++  +      Y I   FR+E        R R+F+  D 
Sbjct: 61  EMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSREFLMKDA 118

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            +     E A      M    L               +   + G L    +   +    +
Sbjct: 119 YSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILAETGESQ 178

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   RA   L   G                 DF   A LT                    
Sbjct: 179 VYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------------- 205

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
               +V          +E+   ++  +           S    RG+E      +      
Sbjct: 206 ----IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHFGTKYSE 254

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P+  + Q P            DG        +       +  + +  +            
Sbjct: 255 PMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGIVWPKAI 302

Query: 374 EMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 I  M   D       +   + L  AG+   +     +  G +    D    P  
Sbjct: 303 APFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDLIGLPTQ 361

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +I G    + G +++KD   G+  S  I 
Sbjct: 362 VIVGPRGVAAGEVEVKDRKTGERQSLGID 390


>gi|302911585|ref|XP_003050523.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731460|gb|EEU44810.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1604

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 73/480 (15%), Positives = 148/480 (30%), Gaps = 60/480 (12%)

Query: 19   PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
              +E+  +  +  S+ +I+  +G   +E P        G   P           L D +G
Sbjct: 1016 SPQELLNQGIVKKSLISIFRRHGA--LECPR-------GVIYPRSSHYGDNTVQLLDANG 1066

Query: 79   QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
              + L YDLT   AR +A+     V              +  G       +  D+    +
Sbjct: 1067 NVLQLPYDLTMGNARMMAKQATGPVIQRTFTFGNVFRDKQDTGQPLMFGEVDFDIVTTDA 1126

Query: 139  SAETADAEMCMMMADTLEAVGIKRNDYHIGIN--NRKILDGILEKIGLHGDDKLNERLIV 196
                      + + D +       +   +  +  +  +L  I E  G+    +     ++
Sbjct: 1127 LDLAMKEAEVLKVIDEIIHTFPSLSSTVMCFHLGHSDLLQLIFEHCGIEPACRRATADVL 1186

Query: 197  LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHEL 255
             +    +  +  Q +++ L           +    +++  +D +  F   D   K+  +L
Sbjct: 1187 SKL--NIHNYTWQKIRIELR----------SAAVGVSATSVDELQRFDFRDTPNKTFSKL 1234

Query: 256  YELVKGTIAGEKG---FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
              L +G+   ++       L  + E  ++ G  +         ++   Y  G ++  +  
Sbjct: 1235 KTLFEGSDMYQRASPTIAHLKEVIEYCKRLGVGTKVYINPLNSLKEGFYTGGILFSCLYD 1294

Query: 313  FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA----------- 361
                +             GGRYD L+   + +     G    +   +             
Sbjct: 1295 KKTKD---------VFAAGGRYDQLIKEHRPRIGGQFGERHAVGFSLAWERLARVSKVSG 1345

Query: 362  ---LKSLESSTNNIKEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNF 417
               LK  E   N +       +     D+  L S      QML    I AEM    +++ 
Sbjct: 1346 RPFLKKGEEEGNGMFNTRRCDVLVASFDAALLRSSGVELLQMLWAHDISAEMA-KDARSP 1404

Query: 418  GNQL-KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI--KNNESWREARVAQI 474
               L K+ D       II          L+IK + +      +I      SW    + + 
Sbjct: 1405 DELLSKHRDEV-YSWIIIIKQDSI----LKIKSMGRKDAPDVDIPSTQLLSWLRGEIRER 1459


>gi|296242499|ref|YP_003649986.1| threonyl-tRNA synthetase editing domain-containing protein
           [Thermosphaera aggregans DSM 11486]
 gi|296095083|gb|ADG91034.1| Threonyl-tRNA synthetase editing domain protein [Thermosphaera
           aggregans DSM 11486]
          Length = 613

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/376 (7%), Positives = 80/376 (21%), Gaps = 5/376 (1%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +                +  +         F     +              +     L  
Sbjct: 215 HMRYGPHGVVMMESVFRYSWKVANELGIPVFKVMGTNMFNLKERPVYEHAELFGDR-LYE 273

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDK---LNERLIVLRAIDKLDKFGLQGVKLL 214
           VG+  + + +          +L    +          E     R   + +      ++  
Sbjct: 274 VGLDEDRFVLRYAACHQQFAMLRDWVISYSHLPFGAFEVADSYRLEQRGEVALCFRLRKF 333

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
                   + +  +   ++    + ++        K +              +   E V 
Sbjct: 334 YMPDLHIFNKNLEEAVRVSRIVQEKILEEAGKLGRKYVALYNVTSDFLENHRQELLEFVR 393

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
                         I      V             I  F +     +      V   G  
Sbjct: 394 RENYPVLLAVIPGGIYYWVLNVEYHIIDNLKRPREIATFQIDVGNGRRFNITFVDEKGEK 453

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
              V            +   I       ++   +      + PV    +    + +    
Sbjct: 454 HHPVIIHTAILGGVERYIYMILDTAAIAEANGQTPYIPTWISPVQARIIPVSKEYVEHAL 513

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                L+  G R ++     +  G +++ A R   P  ++ G  E     L ++      
Sbjct: 514 KIAVELQNQGFRVDVD-DRDETLGKKIRDAGREWIPYIVVVGEREVKTNTLNVRIRRSND 572

Query: 455 ELSREIKNNESWREAR 470
           + +  ++         
Sbjct: 573 QKAMSLEEFARILREE 588


>gi|18977723|ref|NP_579080.1| threonyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|22654114|sp|Q8U176|SYT_PYRFU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|18893458|gb|AAL81475.1| threonyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 625

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/211 (9%), Positives = 57/211 (27%), Gaps = 10/211 (4%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP---VMNEKQKPVVFGSVG 329
                ++         + I     R   +     +  +        ++  Q  V      
Sbjct: 397 EHKDFIIELVKLIGKPVLIEMWKQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERF 456

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL------ESSTNNIKEMGPVLITTM 383
           G   YD          +  +        +   L+                 + P+ +  +
Sbjct: 457 GITYYDENGEEKYPLILHCSPSGAIERVMYAILEKQAKLMQEGKKPMFPLWLSPIQVRVI 516

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
               + L         +  A IR ++     +    +++ A++   P  ++ G  E+  G
Sbjct: 517 PVSKEYLDYALYVAGKIEGARIRVDVD-DEDERLSKKIRRAEKEWIPYIVVVGEKEKETG 575

Query: 444 MLQIKDLAKGKELSREIKNNESWREARVAQI 474
            + ++    GK+    I+      + +    
Sbjct: 576 TITVRRREDGKQYETRIEELIKEIKQKTEGF 606


>gi|330994071|ref|ZP_08318001.1| Prolyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759017|gb|EGG75531.1| Prolyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 440

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/455 (9%), Positives = 112/455 (24%), Gaps = 56/455 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+   I + +R   +  G   +  P ++ ++ L K     D  
Sbjct: 31  MIRQTAAGIYAWLPTGLRVLRNIANIVRAEQDAIGAQELLMPTMQSAE-LWKRSGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +  +QD   + +                                             
Sbjct: 90  GPEMLRIQDRHERDMLFGP--------------------------------------TNE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + +         S +     +  +     + V  +           K             
Sbjct: 112 EMVTDLFGQAIKSYKELPQVLYQIQWKFRDEVRPRFGVMRGREFYMKDAYSFDLDHAAAV 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D      L  LR   +L    +  ++   G    + S +F   A               +
Sbjct: 172 DTYRRMMLSYLRTFQRLGVRAI-PMRADTGPIGGELSHEFLILAPTGES---------GV 221

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             + ++ E   + +     ++  + L      +      ++ +   +   +         
Sbjct: 222 FFDSALEEQDWVGETIDVNDR--DALGAFFTSLTSFYAATDEMHDEAAWAKVPAERRREG 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
               +G      ++               G         + + G  +      +   S +
Sbjct: 280 RGIEVGHIFNFGRKYTQSMDIAV-----SGPDGAPLHPEMGSYGIGVSRLVAAIIEASHD 334

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +     E        + +  +  ++     + L  A     ++   ++  G +   AD 
Sbjct: 335 ENGIIWPESVAPFRAVIINLKNGDAQCDAICEKLYAAAPDDLLYDDRAERAGAKFADADL 394

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G      G +++K+   G+     + 
Sbjct: 395 LGHPWQLIVGPRGAKEGKVEVKNRRTGERTEETVD 429


>gi|258542706|ref|YP_003188139.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633784|dbj|BAH99759.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636843|dbj|BAI02812.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639896|dbj|BAI05858.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642952|dbj|BAI08907.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646007|dbj|BAI11955.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649060|dbj|BAI15001.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652047|dbj|BAI17981.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655104|dbj|BAI21031.1| prolyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 438

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/453 (11%), Positives = 107/453 (23%), Gaps = 56/453 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++   I   +R   +  G   +  P L+ +D L K     D     
Sbjct: 34  QTASGIYAWLPAGLKVLRNISQIVREEQDRVGAQEVLMPTLQSAD-LWKRSGRYDAYGPE 92

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  +QD   + +                                             + I
Sbjct: 93  MLRIQDRHKREL--------------------------------------LYGPTNEEMI 114

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                    S +     +  +     + +  +           K                
Sbjct: 115 TDLFGQTVKSYKDLPQVLYHIQWKFRDEMRPRFGVMRGREFLMKDAYSFDLDYESAVATY 174

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               L  LR   +L    +  ++   G    + S +F   A      +     F    LE
Sbjct: 175 RRMLLAYLRTFQRLGVRAV-PMRADTGPIGGELSHEFLILAPTGESGV-----FYDAALE 228

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +       +   +    + F     ++     +    +     +          G     
Sbjct: 229 EQDWLDEPVDTNSPVALEAF--FNRVTTPYAATDEMHDEAGWQAVPAERQREGRGVEVGH 286

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           I  F     +   V      G   Y  + S          G S     +I A        
Sbjct: 287 IFYFGDKYTRSMDVSVSGPDGNQLYPEMGSY-------GIGVSRLAGAIIEACHDDNGII 339

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                     +     + D L       + + +    A ++   ++  G +   AD    
Sbjct: 340 WPDAVAPFRAVILNLKNGDELCDA--ICERIYSTNEEAFLYDDRAERAGVKFADADLMGH 397

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           P  I+ G      G +++K  A G+     + +
Sbjct: 398 PWQIVVGPRGAKEGKVELKRRATGERHEVSVDD 430


>gi|303230439|ref|ZP_07317200.1| ATP phosphoribosyltransferase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514978|gb|EFL56959.1| ATP phosphoribosyltransferase [Veillonella atypica ACS-049-V-Sch6]
          Length = 533

 Score = 76.0 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 129/355 (36%), Gaps = 39/355 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP GF D        ++ +   + ++  N  +  I TPL+EY D             + 
Sbjct: 5   QLPTGFRDDIGAVAERKDDVSQYLLSLCRNRQYTKISTPLVEYKDVFN---GYTLGRGQH 61

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++         + +R DLT P+ R++A     +      Y +G V    K   G   Q  
Sbjct: 62  MYEFFGSSDASVVIRPDLTMPIGRFLATTNIELPRKF--YYLGDVLMKNKQHRGDINQVT 119

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++ VG     A+ E   ++ +  E+     N   + I + +    I + +GL   ++
Sbjct: 120 QGGIEMVGYEGIDAELECFAIIKEVNESQ--LNNTLLLEIGDARFSRAITDALGLTDGER 177

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                     +D L    L     L+ E + +    F          ++ + + LS    
Sbjct: 178 A-------DLLDALFTKYLPRYNELISEFKNNALYPFLTIWPRLFGTVNDIKNELSQ--- 227

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                    V      ++  + L+ ++  +  +G    +++I  +      YYTG  +  
Sbjct: 228 ---------VILPAGAQRILDSLMDLAGQIEATGQ---QVRIDVSTEPLQSYYTGLTFRG 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +            V   +  GGRYDGL+S F G  +P+ G +  I  L   L  
Sbjct: 276 YV----------DGVSQYIVSGGRYDGLLSGFDGTPMPSVGMAFNIDVLTDVLMQ 320


>gi|194705274|gb|ACF86721.1| unknown [Zea mays]
          Length = 89

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 2/84 (2%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
                D +           LR  G   E+     K      K+A+R N    I+ G  E 
Sbjct: 8   IVFPLDEELEGPASSIASSLRKKGRSVELV--EDKRLKWVFKHAERINASRLILVGNSEW 65

Query: 441 SRGMLQIKDLAKGKELSREIKNNE 464
            RGM+++K L+  +E   +    E
Sbjct: 66  ERGMVRVKVLSTREEFEVKTSELE 89


>gi|195075793|ref|XP_001997187.1| GH23511 [Drosophila grimshawi]
 gi|193892031|gb|EDV90897.1| GH23511 [Drosophila grimshawi]
          Length = 1094

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 58/475 (12%), Positives = 123/475 (25%), Gaps = 46/475 (9%)

Query: 25  IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
           +   +   + N++  +G   +++PLL                N     L    G  + L 
Sbjct: 484 LIEFVKAKVVNVFRKHGAIEVDSPLLSPL------SARNINVNNNAVHLMTHSGSVVLLP 537

Query: 85  YDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            DL    AR+V  N   ++               N          F            + 
Sbjct: 538 CDLRTQFARHVTMNGVNLIRRYCVDRVYREERVFNFHPKQNYECCFDIITPSTSSQLVDA 597

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
               +   +A  L ++  ++ +  I +N+  +L  IL    +            +  I+ 
Sbjct: 598 ELLSLAFEIASELPSL--RKRNIAIRMNHTNLLRSILMYCNVPRSQYGALFEGYMDFIEG 655

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                       L    +      +   NL    +   +   S            +    
Sbjct: 656 RISRF-----QFLSSIMSIVEKSRSAAQNLMDMLLANFLLTGSRSSVDESALKSLMRGKG 710

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            A       L  +  +V  +        I       + +        +       +  + 
Sbjct: 711 EAASLACAALRELETVVGLAYSLGVTCPIHIWAGLPISFDRASTGGIVWQMTADLKPNRS 770

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVP---------ATGFSIGISRLIVALKSLESSTNNIK 373
                +  G RYD ++  F+ Q                +     L   + ++        
Sbjct: 771 GHPSVLAMGERYDAMLHEFQKQAQSYNAALPTRGVLSGAGLSFSLDKLVAAVGMEYAKDC 830

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               + I         L       ++L + GIR  +   +S         A R      I
Sbjct: 831 RAIDIGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIVETASGGGDEAQDLA-RLGALHVI 888

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           +        G L+++                S+   R  +  +  +ELV  ++K+
Sbjct: 889 LVAE----NGSLRVR----------------SFERDRFQERHLTRAELVEFIQKM 923


>gi|269467825|gb|EEZ79574.1| ATP phosphoribosyltransferase [uncultured SUP05 cluster bacterium]
          Length = 319

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 108/303 (35%), Gaps = 33/303 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP G  +    E      +   + ++Y + GF  +  P++EY  SL       D  ++ 
Sbjct: 5   QLPEGIDELTGAEALAFEFVRRQLLDLYADKGFGLVIPPMVEYVKSLLLT---SDSVDEK 61

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            F   D   G+ + +  D+T  +AR  A++    +   +   I  + + +       R  
Sbjct: 62  TFKFLDSASGKMLGVHADITPQIARIDAKSGSENI--AKYCYINAILQTKADDFYASRSP 119

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           IQ   +  GS   +AD E+  +M ++L+ + I      +G          LE + +    
Sbjct: 120 IQAGAELYGSDDVSADVEVIELMLESLKLLSIDSVVLSLGNVAIFNAMIALESLSVEQVL 179

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L +  +   A D         +                          D     + ++ 
Sbjct: 180 QLRQIFVRRSAPDLNVFLSNNTL-----------------------ANADKFSQLMKLEG 216

Query: 249 EKSMH-ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             S+  E   +       +    +L+ I+E +  SG     + +    ++  EY+TG V+
Sbjct: 217 NTSILGEALTVFNDLPEAKTAIEDLIRINEQLNTSG---VSVIVDLAEIKAYEYHTGVVF 273

Query: 308 EAI 310
            A 
Sbjct: 274 SAY 276


>gi|302658671|ref|XP_003021037.1| hypothetical protein TRV_04902 [Trichophyton verrucosum HKI 0517]
 gi|291184912|gb|EFE40419.1| hypothetical protein TRV_04902 [Trichophyton verrucosum HKI 0517]
          Length = 1559

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/452 (12%), Positives = 138/452 (30%), Gaps = 47/452 (10%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ +   + D +  ++  +G   +ET          +          G   L D  G  +
Sbjct: 993  ELLLHGVVKDKLTALFRKHGA--VETC---RQSLFPRSS----HYGPGAVRLLDPGGNLV 1043

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
             L YDLT P AR + +   +I             V R E  G       I          
Sbjct: 1044 QLPYDLTLPNARALPKQDLSIEKAFSFGTVYRESVHRGEPRGHKEVDFDIVSYNTLDLPL 1103

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
             E    ++   + D    +  +       +N+  +L+ ++    +  + +   + ++ + 
Sbjct: 1104 KEAEVIKVLDEIIDEFPPL--RSTQMCFHLNHSDLLEAVVAFCRITPEQRPIVKEVISKL 1161

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
               + ++ +Q ++  L           +    + S  ID +  F    +   + +     
Sbjct: 1162 --NIGQYTMQKIRSELR----------SPSIGVPSTSIDDLSRF-DFRVVSYLEKFKVKR 1208

Query: 260  KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
            K  I+     N+      ++ +  ++  R  + +   R         ++ IL     + +
Sbjct: 1209 KVYISPLSSLNDKFYNGSVLFQCVFDKKRRDVFAAGGRYDSLIQE--FQPILR----SNR 1262

Query: 320  QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
             +    G   G  + +G ++ +   +  +                 ++   N        
Sbjct: 1263 PRSHAVGFNLGLDKLNGSMTNYLKGSNKSF-------------LKPDAEVGNSWRKNKCD 1309

Query: 380  ITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +     D     +        L    I AE+   ++ +  + L      N    +I    
Sbjct: 1310 VLVASFDPSVLRTVGVGIVSTLWAHDISAELAADTTPSLEDLLTRYVDDNYSWVVIVKQD 1369

Query: 439  ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               RG L++K + + ++      +   W    
Sbjct: 1370 SIERG-LRVKSVQRKEDFDVRSSDLVPWLRNE 1400


>gi|227830722|ref|YP_002832502.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579616|ref|YP_002838015.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.G.57.14]
 gi|229581718|ref|YP_002840117.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.N.15.51]
 gi|284998235|ref|YP_003420003.1| Anticodon-binding domain protein [Sulfolobus islandicus L.D.8.5]
 gi|227457170|gb|ACP35857.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus L.S.2.15]
 gi|228010331|gb|ACP46093.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012434|gb|ACP48195.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus Y.N.15.51]
 gi|284446131|gb|ADB87633.1| Anticodon-binding domain protein [Sulfolobus islandicus L.D.8.5]
          Length = 386

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 2/133 (1%)

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEM-GPVLITTMDHDSDSLSKYQMYTQMLR 401
             N   T   +G       L+S+      + +   P+ +  +    D L       + LR
Sbjct: 240 WVNESRTYVDVGRLVYYFILESIRKQPPTLPDWLNPIQVRLLPVKKDFLDFSIQVAERLR 299

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             GIR  +      + GN+++ A     P  II G  E     L +K  A  ++ S  ++
Sbjct: 300 KEGIRVNIDDLDD-SLGNKIRRAGTEWIPFVIIIGEREVKTSTLTVKIRANNEQKSMSVE 358

Query: 462 NNESWREARVAQI 474
                 +  V + 
Sbjct: 359 ELVKEIKDEVKER 371


>gi|329114694|ref|ZP_08243453.1| Prolyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696174|gb|EGE47856.1| Prolyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 459

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/453 (11%), Positives = 107/453 (23%), Gaps = 56/453 (12%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++   I   +R   +  G   +  P L+ +D L K     D     
Sbjct: 55  QTASGIYAWLPAGLKVLRNISQIVREEQDRVGAQEVLMPTLQSAD-LWKRSGRYDAYGPE 113

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  +QD   + +                                             + I
Sbjct: 114 MLRIQDRHKREL--------------------------------------LYGPTNEEMI 135

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                    S +     +  +     + +  +           K                
Sbjct: 136 TDLFGQTVKSYKDLPQVLYHIQWKFRDEMRPRFGVMRGREFLMKDAYSFDLDYESAVATY 195

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               L  LR   +L    +  ++   G    + S +F   A      +     F    LE
Sbjct: 196 RRMLLAYLRTFQRLGVRAV-PMRADTGPIGGELSHEFLILAPTGESGV-----FYDAALE 249

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +       +   +    + F     ++     +    +     +          G     
Sbjct: 250 EQDWLDEPVDTNSPIALEAF--FNRVTTPYAATDEMHDEAGWQAVPAERQREGRGVEVGH 307

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           I  F     +   V      G   Y  + S          G S     +I A        
Sbjct: 308 IFYFGDKYTRSMDVSVSGPDGNQLYPEMGSY-------GIGVSRLAGAIIEACHDDNGII 360

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                     +     + D L       + + +    A ++   ++  G +   AD    
Sbjct: 361 WPDAVAPFRAVILNLKNGDELCDA--ICERIYSTNEEAFLYDDRAERAGVKFADADLMGH 418

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           P  I+ G      G +++K  A G+     + +
Sbjct: 419 PWQIVVGPRGAKEGKVELKRRATGERHEVSVDD 451


>gi|227827985|ref|YP_002829765.1| threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.14.25]
 gi|227459781|gb|ACP38467.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.14.25]
          Length = 386

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 2/133 (1%)

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEM-GPVLITTMDHDSDSLSKYQMYTQMLR 401
             N   T   +G       L+S+      + +   P+ +  +    D L       + LR
Sbjct: 240 WVNESRTYVDVGRLVYYFILESIRKQPPTLPDWLNPIQVRLLPVKKDFLDFSIQVAERLR 299

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             GIR  +      + GN+++ A     P  II G  E     L +K  A  ++ S  ++
Sbjct: 300 KEGIRVNIDDLDD-SLGNKIRRAGTEWIPFVIIIGEREVKTSTLTVKIRANNEQKSMSVE 358

Query: 462 NNESWREARVAQI 474
                 +  V + 
Sbjct: 359 ELVKEIKDEVKER 371


>gi|229585254|ref|YP_002843756.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.27]
 gi|238620213|ref|YP_002915039.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.4]
 gi|228020304|gb|ACP55711.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.27]
 gi|238381283|gb|ACR42371.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus M.16.4]
          Length = 386

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 2/133 (1%)

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEM-GPVLITTMDHDSDSLSKYQMYTQMLR 401
             N   T   +G       L+S+      + +   P+ +  +    D L       + LR
Sbjct: 240 WVNESRTYVDVGRLVYYFILESIRKQPPTLPDWLNPIQVRLLPVKKDFLDFSIQVAERLR 299

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             GIR  +      + GN+++ A     P  II G  E     L +K  A  ++ S  ++
Sbjct: 300 KEGIRVNIDDLDD-SLGNKIRRAGTEWIPFVIIIGEREVKTSTLTVKIRANNEQKSMSVE 358

Query: 462 NNESWREARVAQI 474
                 +  V + 
Sbjct: 359 ELVKEIKDEVKER 371


>gi|15614982|ref|NP_243285.1| prolyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81857777|sp|Q9KA71|SYP_BACHD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|10175039|dbj|BAB06138.1| prolyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 569

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 71/561 (12%), Positives = 139/561 (24%), Gaps = 95/561 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G         R+  +I   +R   +  G   I  P L  ++ L +     ++ 
Sbjct: 31  MIRQVAAGIYTYLPLARRVIRKIESIVREELDQTGAQEITMPTLHPAE-LWQESGRWEKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH--- 120
              +  L D   +  +L     ++   L R    ++  +       +        +    
Sbjct: 90  GDELMRLTDRHNRQFALGPTHEEVITSLIRDSINSYKKLPLNVYQIQ-SKFRDERRPRFG 148

Query: 121 --GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH--------IGIN 170
                 F           G S +     M    +      G+                 +
Sbjct: 149 LLRGREFIMKDAYSFHTGGESLDEMYKVMYDAYSRIFRRAGLNVRPVIADSGAIGGKDTH 208

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
               L  + E    + D       I + A+        + +         D         
Sbjct: 209 EFMALADVGEDTIAYSDQSDYAANIEMAAVKVNYTRPDEPLLERELVDTGDAKTIRAVAE 268

Query: 231 NLTSEQIDIMVSFL-SIDLEKSM-----HELYELVKGTIAGEKGFNELVVISELVRKSGY 284
            L+ ++  I+ S L SID E ++           +K   A       L    E++   G 
Sbjct: 269 RLSVQEEKIIKSLLVSIDDEWALILLRGDHELNDIKLKHALGASDIRLATEEEVLEVIGT 328

Query: 285 NSNRIKISSTIV--------------------------------RGLEYYTGCVYEAILG 312
               I                                       R     T      I  
Sbjct: 329 EVGTIGPVDVKGVKVIADHGIKSIVNGVCGANESNKHFIHVNEERDFTVDTYADLRFIQE 388

Query: 313 FPVMNEKQKPVVFGS-----------VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                + +  + F                  +         G++ P      GI    + 
Sbjct: 389 GDPSPDGKGTIRFAQGIEVGQVFKLGTVYSEKLGATFLDENGKSQPMLMGCYGIGVSRMV 448

Query: 362 LKSLESSTNNIKEMGPVLITTMD--------HDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
              +E   +    + P  +   D           + +         L+ AG+   +    
Sbjct: 449 AAVIEQHHDEDGIVWPTSVAPFDVHVLALNVKKEEQMKLADSVYHSLQQAGLDVLLDDRP 508

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +  G + K AD    PL +  G      G +++K    G+                   
Sbjct: 509 ERA-GVKFKDADLIGLPLRVAVGKR-ADEGYVEVKVRKTGE------------------V 548

Query: 474 ITIPISELVSTVKKILQENKE 494
           I +   ELV T++  LQ+  E
Sbjct: 549 IEVHADELVPTIQAKLQQLAE 569


>gi|67523581|ref|XP_659850.1| hypothetical protein AN2246.2 [Aspergillus nidulans FGSC A4]
 gi|40744775|gb|EAA63931.1| hypothetical protein AN2246.2 [Aspergillus nidulans FGSC A4]
 gi|259487634|tpe|CBF86454.1| TPA: eIF2 alpha kinase (Eurofung) [Aspergillus nidulans FGSC A4]
          Length = 1552

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 61/469 (13%), Positives = 137/469 (29%), Gaps = 47/469 (10%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ +   + + + +I+  +G        +E +  +    P     N G   L D  G  +
Sbjct: 955  ELLMHGLVKERLTSIFRKHG-------AVETTRQML--FPKSQHYNSGDVRLLDASGNML 1005

Query: 82   SLRYDLTAPLARYVAEN--FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
             L +DLT P AR +          F   T         E          I        + 
Sbjct: 1006 QLPFDLTLPNARAIPRQDPSLEKTFAFGTVYRDTPHGGEPRTHKEVDFDIVSRNTLDLAL 1065

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
             E    ++   + +    +          IN+  +L  ++E   +        + ++ R 
Sbjct: 1066 KEAEVIKVLDEIIEEFPPLKASA--MCFLINHSDLLQLVMEFCRIKPSQIPLVKEVISRL 1123

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
               + K+ +Q ++  L           +    + S  +D +  F   D  K   +  + +
Sbjct: 1124 --NVGKYSMQKIRSELR----------SPTIGVASTSLDELARFDFRDSPK---QTQKRL 1168

Query: 260  KGTIAGEKGFNELVVISE-------LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  + G +    L  I          ++             + +    +    +++ I  
Sbjct: 1169 RAIMEGTEFAERLTPIFARINSLVTFLQGFKIKRKFFICPLSSLNEKFFRGSILFQCIFD 1228

Query: 313  FPVMNEKQKPVVF---------GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
                +       +         G      +   +        + +       +    +LK
Sbjct: 1229 GKRRDVFAAGGRYDSLVQDFRSGVTTNRVQPHAVGFNLSWDRLSSAMIDYVKAPTKASLK 1288

Query: 364  SLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
              E+      +     +     D   L +     TQ L +  I AE+ + +S +    L 
Sbjct: 1289 HPETDVGAFWKTRRCDVLVASFDPTILREMGVQLTQDLWSNSISAELAVDAS-SLEELLT 1347

Query: 423  YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
                 N    +I     + RG  +++ L   +EL         W  + +
Sbjct: 1348 KYKEHNHSWIVIAKQDSKERG-FKVRCLVPKEELDIRGSELIPWLRSEI 1395


>gi|158300194|ref|XP_320188.4| AGAP012368-PA [Anopheles gambiae str. PEST]
 gi|157013040|gb|EAA00405.4| AGAP012368-PA [Anopheles gambiae str. PEST]
          Length = 1484

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 62/502 (12%), Positives = 144/502 (28%), Gaps = 72/502 (14%)

Query: 7    LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            +   +P              + +   +  ++  +G   + TPLL            +   
Sbjct: 867  MVPMIP-----ILP----RFDYVKAKLVALFRKHGAIEVVTPLLTPYTK-------QHAA 910

Query: 67   NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGR 124
                  L    G  ++L  DL  P  R++A N    +               N       
Sbjct: 911  RSNTVKLMTHSGSVVTLPDDLRVPFLRHIALNGIKHIRRYSIGRVYREKKVFNFHPKQVY 970

Query: 125  FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
               F            +     +   +   L  +  +  +    +N+  +L  IL    +
Sbjct: 971  ECAFDIVTPSRGHLITDAELLAIATDVMRELNLLQGR--NVFFRLNHIGLLRAILMHCNV 1028

Query: 185  HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              D       +V   +D+            + + +  +  +   G +     +  +   L
Sbjct: 1029 PMDKYRELFEMVAEFLDEK-----------ISKFQLSSLINSLIGGSAAKINVSFLCDAL 1077

Query: 245  SIDLEKSMHELYELVKGTIAGEKGFNELVVIS-----ELVRKSGYNSNRIKISSTIVRGL 299
             ++L         ++K  I G+     L  ++      +V  +     +  ++      +
Sbjct: 1078 QLELSSVGLLGGSILKSIIRGKGEAASLAKVAVRELETVVTLAQNMGVQCPLNVCPGLPV 1137

Query: 300  EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ------NVPATGFSI 353
             Y        +       + ++     ++  GGRYDG ++ F+         VP    S 
Sbjct: 1138 NYERAKTGGIVWQLLGELKPKRKNPLTTIAVGGRYDGKLAEFQKSGINNGLQVPKVDLSG 1197

Query: 354  GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR---AEMF 410
                 ++       +     E   V+I             Q   + L +  I+    E  
Sbjct: 1198 AGFSFLLDKLVNAIAPTAGYEPIEVMICVTGSRPQPKEVAQTL-RPLWSNSIKTCVVETS 1256

Query: 411  LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G+  + G            + ++ G G    G ++++                SW   R
Sbjct: 1257 AGAVDDLGK------EAGATVVVLLGDG----GEMRVR----------------SWNHDR 1290

Query: 471  VAQITIPISELVSTVKKILQEN 492
              ++ +   EL+  + + L+ +
Sbjct: 1291 FQELHVTRPELMPYILRTLRRS 1312


>gi|148255883|ref|YP_001240468.1| prolyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166980102|sp|A5EK68|SYP_BRASB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146408056|gb|ABQ36562.1| Prolyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 444

 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/456 (12%), Positives = 120/456 (26%), Gaps = 62/456 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++  +I   +R      G   +  P L+ +D L +     D     +  +
Sbjct: 38  GIYAWLPLGFKVLKKIEQIVREEQNRAGALELLMPTLQLAD-LWRESGRYDAYGPEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D   + +       ++   + R   +++  +      Y I   FR+E+       +  +
Sbjct: 97  SDRHKRELLYGPTNEEMITDIFRAYVKSYRNLP--LNLYHIQWKFRDEQRPRFGVMRGRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             +                            ++ Y   ++         +    +     
Sbjct: 155 FLM----------------------------KDAYSFDLDEAGARRAYNKMFVAYLRTFA 186

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
              L  +             ++   G    D S +F   A      +      L + +  
Sbjct: 187 RMGLKGI------------PMRAETGPIGGDLSHEFIVLAETGESGVYCDRDVLDLPIPP 234

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRGLEYYTGCVYEA 309
           +  +            K +  L   +E V         +        RG+E      +  
Sbjct: 235 ASVDYD---GDLTPIIKQWTSLYAATEDVHDGARFEAEVPEERRLHTRGIEVGQIFYFGT 291

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
               P+      P        GG Y   VSR  G  + A     GI              
Sbjct: 292 KYSEPMKALVAGPDGAEVTIHGGSYGVGVSRLAGAIIEACHDDAGI-----------KWP 340

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
             +     V++      SD+ +  +   + L   G+         +  G     AD    
Sbjct: 341 EEVAPFRAVILNLKQGGSDTDAACEQLYRDLLAKGVDVLYDDTEQRAGGK-FATADLIGI 399

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           P  I+ G    + G +++K  + G        +  +
Sbjct: 400 PWQIMVGPKSLAEGKVEVKTRSDGARQMMSPADVVA 435


>gi|156978155|ref|YP_001449061.1| threonyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156529749|gb|ABU74834.1| hypothetical protein VIBHAR_06960 [Vibrio harveyi ATCC BAA-1116]
          Length = 394

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/459 (10%), Positives = 116/459 (25%), Gaps = 86/459 (18%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P G         R+   I   +R++Y   GF  + TP+    +   K     D  ++
Sbjct: 18  PQAP-GMIFWHPNGWRLFESIKSHMRSVYHRSGFQEVNTPVFMKQELWQKS-GHIDMFSE 75

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            +                            F       ++  +                 
Sbjct: 76  NM----------------------------FFGGNQEQQSGYVLK------------PMS 95

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
               +        +       +    L          +  +  R+               
Sbjct: 96  CPAHILLYKRGVHSHKDLPIKLFEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCQWEQA 155

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +   R  + RA      +G + +++ +        GD                       
Sbjct: 156 EDEVRQFLQRARKVYAAYGYEHIEVKVSTKPEKALGD----------------------- 192

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           ++      +++      EK   EL                + ++ ++ R  +  T     
Sbjct: 193 DEDWIRAQDILVSACIHEKFHTELQDGEG---AFYGPKIELSLTDSMGRSWQCGT----- 244

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             + F     K+  V F S       +G        +    G       +++ +   +  
Sbjct: 245 --IQFDFNLAKRFDVKFTSE------EGTFEAPVIMHQAMYGSVERWIGILLEMSQGDLP 296

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                +     +     +  +    ++    L    I A + L  S + G ++K   ++ 
Sbjct: 297 LWLHPQP----VAIASVNHSNCHFAKIVADRLLDIDIHALLDLSKS-SMGRKMKRFHKKK 351

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            P  I  G  E    ++ IK+  +  E    +++   + 
Sbjct: 352 IPFVISIGDYEVENDVVSIKNRKEASETQVSMEHLAEYI 390


>gi|45184741|ref|NP_982459.1| AAL083Wp [Ashbya gossypii ATCC 10895]
 gi|44980087|gb|AAS50283.1| AAL083Wp [Ashbya gossypii ATCC 10895]
          Length = 1698

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/414 (13%), Positives = 132/414 (31%), Gaps = 47/414 (11%)

Query: 20   TKEIRIRNRILDSIRNIYENYGFDPI-ETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
                 +R ++ + +  ++  +G     E P++                ++ V+ + D  G
Sbjct: 1073 PFSQLLRAQMKEEVEKVFRRHGGIENNEPPIIFPKAPFYS--------SQNVYEVLDRGG 1124

Query: 79   QWISLRYDLTAPLARYVAENFDTIVFPCRTY--RIGPVFRNEKHGPGRFRQFIQCDVDNV 136
              + L+YDLT P+ARY+++N   I    R          ++    P RF +     +   
Sbjct: 1125 SVLQLQYDLTYPMARYLSKNPHCISKQYRMQSVYRPAEQQHGSVEPRRFGEIDFDIISGS 1184

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
             + +   DAE   ++ + +    +      + I N   +   +  +      + +    +
Sbjct: 1185 SADSALYDAESIKIIDELISVFPVFEKTNTLIIVNHSDIMESIFNLCSIDKAQRSLVSQM 1244

Query: 197  LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKSMHEL 255
            L              ++   +   D   +     N++S  ++ +  F   +D + +   L
Sbjct: 1245 LS-------------QVGFAKSFKDVKTELKAQLNISSTSLNDLEMFDFKVDFDNAKKRL 1291

Query: 256  YELVKGTI---AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             +L+  +      E+  + +  +   ++  G   N +    +      Y  G +++AI  
Sbjct: 1292 NKLMIDSPHLTKVEESLSYIFKVLNFLKPLGVTRNVVVSPLSNYNSAFYKGGIMFQAIY- 1350

Query: 313  FPVMNEKQKPVVFGSVGGGGRY-DGLVSRFKGQNVPATGFSIGISRLIVALKS------- 364
                  K      G       Y              A GF++    + + +++       
Sbjct: 1351 -DSGRVKSLLAAGGRYDNLISYIARPSGGKIKHIKRAVGFNLAWDTIYLIVQNYFKLASG 1409

Query: 365  ---------LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                     L  +    K     ++     D+   S        L   GI  ++
Sbjct: 1410 KQTKNRSRFLRENAIEWKPKRCDILVASFSDAILNSLGVRIVNKLWKLGISVDL 1463


>gi|332158991|ref|YP_004424270.1| threonyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034454|gb|AEC52266.1| threonyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 625

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/364 (12%), Positives = 103/364 (28%), Gaps = 22/364 (6%)

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           ++  E     ++          V S  +       +  A       I ++      +   
Sbjct: 262 MYDFEHPALEKYLNRFPARQYIVLSGDKRY----FLRFAACFGQFLISKDAVISYKHLPL 317

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN---SGDFTKGA 230
            +  +               L  LRA    D   L        E        S +  +G 
Sbjct: 318 RMYELTRYSFRREKRGELSGLRRLRAFTMPDMHTLAKDLEQAKEEFKKQFKLSMEVLEGV 377

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
            LT +  ++ + F     +++   + ELVK            ++   ++ +         
Sbjct: 378 GLTPDDYEVAIRFTEDFWKENRDFIIELVK------------LIGKPVLIEMWKQRFFYF 425

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I       ++        + +   V N ++  + +    G  RY   +      +     
Sbjct: 426 ILKFEFNFVDNLDKAAALSTVQIDVENAERFGIKYYDENGEERY--PLILHCSPSGAIER 483

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
               I      L            + P+ +  +   +D L         L  A IR ++ 
Sbjct: 484 VMYAILEKQAKLMQQGKKPMLPVWLSPIQVRVIPVSNDFLDYALYVAGKLEGAKIRVDVD 543

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +    +++ A++   P  ++ G  E+  G + ++    GK+    I+      + +
Sbjct: 544 -DEDERLNKKIRRAEKEWIPYIVVVGAKEKETGTIMVRRREDGKQYETRIEELIREIKEK 602

Query: 471 VAQI 474
               
Sbjct: 603 TEGF 606


>gi|63054755|ref|NP_595991.2| eIF2 alpha kinase Gcn2 [Schizosaccharomyces pombe 972h-]
 gi|46396516|sp|Q9HGN1|GCN2_SCHPO RecName: Full=Serine/threonine-protein kinase gcn2; AltName:
            Full=Serine/threonine-protein kinase ppk28
 gi|51860125|gb|AAU11313.1| Gcn2 [Schizosaccharomyces pombe]
 gi|157310427|emb|CAC05730.2| eIF2 alpha kinase Gcn2 [Schizosaccharomyces pombe]
          Length = 1576

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 72/488 (14%), Positives = 156/488 (31%), Gaps = 49/488 (10%)

Query: 29   ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
            + D +  ++  +G    E      S  L       D+    V SL D +G  + L YD  
Sbjct: 990  VRDHVVKVFRRHGAKERE------SHILFPKSSQYDKDQASV-SLLDKNGTLLQLPYDTV 1042

Query: 89   APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
             P AR VA N            +      +  G  +  + I  D+     + +  DAE  
Sbjct: 1043 LPYARNVARNAVEEEKTYLISDV--FREAKGGGRPKAIKEISFDITTNSDNLDWYDAETI 1100

Query: 149  MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
              + + L  +     +  I IN+  IL  IL+ + +  D +     I+ +   +L    L
Sbjct: 1101 KALDEVLTEI-PSLTESCILINHADILSSILDYLQVSKDKRRMATHILGQINQRL---TL 1156

Query: 209  QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
              V+  L              + + S  +D +  F   +  +        + G    +K 
Sbjct: 1157 SQVRNQLR-----------IESLVPSTTLDDLSLFDFRENYEEGASKLRKIFGKEMPQKM 1205

Query: 269  F---NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
                N +  + +L+R    +     +   +     Y  G +++AI              +
Sbjct: 1206 RTALNYMERVVKLLRALKISHQLYFMPLCVYNFEFYDGGLMFQAINLAEKSELICAGGRY 1265

Query: 326  GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP-------- 377
              +    R+         +     G    + +L+ ++       N+ +            
Sbjct: 1266 DKLV---RFFDPPLMRTARKKHVVGICFALEKLVFSMLRYIRFHNSKQSSKHSPSPTLKS 1322

Query: 378  --------VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                    V +       DS+ +     Q L    I+A++ L  + +    + +      
Sbjct: 1323 VGPWAPRRVDVLVTSIGKDSILEKCSLLQELWALNIQADIVLRGASSLEEIVTHYRSEGI 1382

Query: 430  PLAIIQ-GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
               ++      +    ++ +++ K ++          W    + +     S L S  K+I
Sbjct: 1383 NWVLVVRQKNTQMEHSVKARNILKNEDDEIRFDEVGMWLLGEINERKRNESMLQS--KRI 1440

Query: 489  LQENKEEI 496
            L   ++++
Sbjct: 1441 LDSAQQDV 1448


>gi|8039795|sp|Q58597|SYT_METJA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 620

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/342 (11%), Positives = 101/342 (29%), Gaps = 25/342 (7%)

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
           E+ +  A       +K++ Y +       L  +      +        L  LR     D 
Sbjct: 281 ELMLRFAACFGQFMMKKDMYLLPRYLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDM 340

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
             +        E       +  K  +  +    ++  F     ++     +++ K     
Sbjct: 341 HTVCLNLEQAMEEFEKQFWECLKTGDDLNLSYSVIFRFTKDFFDEHRDWFFKIAKEY-KN 399

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           + G + ++ I    +        I +  ++ R +E  T       +   V + K+  +  
Sbjct: 400 KYGKDVILEILPKRKHYWVGKVDIAVIDSLGRPIENPT-------VQIDVESAKRFDIKV 452

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
                G  Y  ++      ++      +     I A     ++      + P+ +  +  
Sbjct: 453 H-TNEGEIYPIILHCSPTGSIERVLCGLLEKAAIEA--EKGNAPMLPVWLSPIQVRVIPV 509

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
                       + LR   IRA+      ++   +++ A +   P  ++ G  E     L
Sbjct: 510 AERHYDYALKVAEKLRENNIRADFD-DREESVSKKIRNAGKEWVPYVVVIGDEEMESDKL 568

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
            +                E     +  +  + + EL+  +KK
Sbjct: 569 TV-------------TIREKSTLKKPYKEKMTLDELIERIKK 597


>gi|56695573|ref|YP_165923.1| ATP phosphoribosyltransferase regulatory subunit [Ruegeria pomeroyi
           DSS-3]
 gi|56677310|gb|AAV93976.1| histidyl-tRNA synthetase, homolog [Ruegeria pomeroyi DSS-3]
          Length = 362

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 125/373 (33%), Gaps = 41/373 (10%)

Query: 23  IRIRNRILD---SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
           +  R RIL+    +R  +E  G   +ETP+L+ +++L     ++ R    V S      Q
Sbjct: 1   MITRARILEQAARLRAGFEAAGAQGVETPILQPAETLLDLYGEDIRARAYVTSDALRGEQ 60

Query: 80  WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
              LR D T P+ +   E+      P R    G VFR ++H P R  ++IQ   +    +
Sbjct: 61  M--LRPDFTVPVVQKHMEHGAE---PARYTYAGEVFRRQEHDPDRANEYIQVGYEVFDRT 115

Query: 140 AETA-----------------------DAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
              A                       D  + M   + L+    ++      I   +   
Sbjct: 116 NPAAADAEVFALIAQALDGLALRAATGDIGILMAAVEGLKTTEPRKAALMRHIWRPRRFR 175

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSE 235
            +L++             ++  +    D     G +     E R +        A ++  
Sbjct: 176 ALLDRYAGRTTVPPARAALLAESEPLADGAPEIGKRSRAEVEARIEVLRADAAAAPISDN 235

Query: 236 QIDIMVSFLSID--LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           ++  + + LS+   +  ++  L ++           + L      +R  G N +R+   +
Sbjct: 236 EMAGLDALLSVRETMPYALEHLRDIAVDLPQITPALDRLEARIAALRARGINVDRLDFEA 295

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           +  R          E   GF      ++      +  GGRYD L  R            +
Sbjct: 296 SYGR-------TSMEYYDGFVFGFYAERRPDLPPIATGGRYDALTRRLGNGAEIPAVGGV 348

Query: 354 GISRLIVALKSLE 366
               L++ L   E
Sbjct: 349 LRPGLMLLLAEAE 361


>gi|303230015|ref|ZP_07316789.1| ATP phosphoribosyltransferase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515381|gb|EFL57349.1| ATP phosphoribosyltransferase [Veillonella atypica ACS-134-V-Col7a]
          Length = 534

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 131/355 (36%), Gaps = 39/355 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP GF D        ++ +   + ++  N  +  I TPL+EY D    ++       + 
Sbjct: 5   QLPTGFRDDIGAVAERKDDVSQYLLSLCRNRQYTKISTPLVEYKDVFNGYI---LGRGQH 61

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++         + +R DLT P+ R++A     +      Y +G V    K   G   Q  
Sbjct: 62  MYEFFGSSDASVVIRPDLTMPIGRFLATTNIELPRKF--YYLGDVLMKNKQHRGDINQVT 119

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q  ++ VG     A+ E   ++ +  E+     N   + I + +    I + +GL   ++
Sbjct: 120 QGGIEMVGYEGIDAELECFAIIKEVNESQ--LNNTLLLEIGDARFSRAITDALGLTDGER 177

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                     +D L    L     L+ E + +    F          ++ + + L+    
Sbjct: 178 A-------DLLDALFTKYLPRYNELISEFKNNALYPFLMIWPRLFGTVNDIKNELTQ--- 227

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                    V      ++  + L+ ++  +  +G    +++I  +      YYTG  +  
Sbjct: 228 ---------VILPAGAQRILDSLMDLAGQIEATGQ---QVRIDVSTEPLQSYYTGLTFRG 275

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +            V   +  GGRYDGL+S F G  +P+ G +  I  L   L  
Sbjct: 276 YV----------DGVSQYIVSGGRYDGLLSGFDGTPMPSVGMAFNIDVLTDVLMQ 320


>gi|239637520|ref|ZP_04678492.1| threonyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596738|gb|EEQ79263.1| threonyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 645

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 61/481 (12%), Positives = 124/481 (25%), Gaps = 98/481 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     D   + +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDHYQEDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
              D  + + LR             +         +YR  P+   E     R+       
Sbjct: 321 MKLDETEEMVLRPMNCP-------HHMMIYNNKPHSYRELPIRIAELGTMHRYEASGAVS 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                     G+  ND HI +   +I +     + +        
Sbjct: 374 G--------------------LQRVRGMTLNDSHIFVRPDQIKEEFKRVVNM-------- 405

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   D    FG +  +  L     +                         D EK  
Sbjct: 406 ------IQDVYKDFGFEDYRFRLSYRDPE-------------------------DKEKYF 434

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +EL +  E           I  ++     L+            
Sbjct: 435 DDDEMWNKAENMIKEAADELGLSYE---------EAIGEAAFYGPKLDVQVKTAMGKEET 485

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                          +   G+               +        +    +  + +    
Sbjct: 486 LSTAQLDFLLPERFELTYIGQDGEQHRPVVIHRGVVSTME---RFVAFLTEETKGAFPTW 542

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V I  ++ D       +     L++ G+R E+    ++  G +++ A  +  P  
Sbjct: 543 LAPKQVEIIPVNLD-LHYDYAKSIQDELKSQGVRVEID-DRNEKMGYKIREAQMQKIPYQ 600

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           I+ G  E     + ++      + + E K+   W              LV  ++  L+++
Sbjct: 601 IVVGDKEVENNEVNVRKYGSQDQETLE-KDEFIW-------------NLVDEIR--LKKH 644

Query: 493 K 493
           +
Sbjct: 645 R 645


>gi|254467858|ref|ZP_05081264.1| ATP phosphoribosyltransferase regulatory subunit, putative [beta
           proteobacterium KB13]
 gi|207086668|gb|EDZ63951.1| ATP phosphoribosyltransferase regulatory subunit, putative [beta
           proteobacterium KB13]
          Length = 320

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/305 (18%), Positives = 112/305 (36%), Gaps = 35/305 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +P    D   ++     +    + + +    F+ I   ++EY+D++       D     
Sbjct: 6   SIPDKVEDLYPQKALELEKNRRVLVDFFLKNKFELISPAMIEYADNVSFNGKSVD---SD 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFD--TIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +F L D   G+ I +  DLT   AR   +N+   +          GPV + +     + R
Sbjct: 63  MFKLSDPLSGRLIGITPDLTIQTAR--IDNYLASSSNDIKSYCYCGPVLKADTSSFNQSR 120

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + +Q  V+  G+    AD  +   +  +L+ + IK  +  +  N+  I    L+ +    
Sbjct: 121 EELQVGVEIYGNEKIEADISVVSTLIKSLKLLKIK--NILLSFNDISIYTAFLKSL---- 174

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                           L     + ++    +    +  +   G NL S +I  +  F+ +
Sbjct: 175 ---------------ALSAHDSKQLRSYFAKKDLVSIKNLL-GKNLNSSKISKIELFMDM 218

Query: 247 DL-EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              +KS+ ++ E   G          L  I   +      S +I I  + V   EY++G 
Sbjct: 219 FGDDKSLKKIQEFFVGNKVILDRLKNLKKIMSALPA----SVKIIIDLSDVDFYEYHSGF 274

Query: 306 VYEAI 310
           ++ A 
Sbjct: 275 IFSAY 279


>gi|163868357|ref|YP_001609566.1| prolyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189083488|sp|A9IUL1|SYP_BART1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|161018013|emb|CAK01571.1| Prolyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 441

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/469 (12%), Positives = 129/469 (27%), Gaps = 62/469 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G         ++ +++   IR   E  G   I  P ++ +D L +  
Sbjct: 26  MLRAGMIRQQT-SGIYSWLPLGKKVLDKVCKIIREEQERAGAIEILMPTIQSAD-LWRES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D     +  ++D   + +       ++   + R    ++  +      Y I   FR+
Sbjct: 84  GRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRD 141

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E        +  +  + +  S     +          +  +             R  L  
Sbjct: 142 EIRPRFGVMRAREFLMKDAYSFDLDYEGSKTSYNRMFVAYLRTFS---------RLGLKA 192

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I                                ++   G      S +F   A      I
Sbjct: 193 I-------------------------------PMRADTGPIGGKLSHEFIILAETGESAI 221

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
                FL + +  S  +  +        ++ +      +E +      +   + +    R
Sbjct: 222 FCDKQFLELSVPNSSIDFSDKAVLDDTVKQ-WTSFYAATEEMHNEEEWARLSEENRLSAR 280

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
           G+E      +      P+  +                DG        +       +  + 
Sbjct: 281 GIEVGHIFHFGTKYSAPMEAKVMGQ------------DGKEHVVSMGSYGIGPSRLVAAA 328

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKN 416
           +  +                  I  M  D +  ++      Q L+ AG    +   + + 
Sbjct: 329 IEASHDEKGIIWPKSMAPFDFGIINMKPDDEKCTQACEFLYQGLKDAGFDPFLDDRNER- 387

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            G++    D    P  II G    +   ++IKD   G + S ++++  S
Sbjct: 388 PGSKFATMDLIGLPTQIIVGPNSIAHNEVEIKDRKTGAKKSLKVEDVLS 436


>gi|194374235|dbj|BAG57013.1| unnamed protein product [Homo sapiens]
          Length = 320

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 27/48 (56%)

Query: 4  KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLE 51
          K K   + P+G  D   +++ +R ++ D I   ++ +G + I+TP+ E
Sbjct: 51 KQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFE 98


>gi|116617774|ref|YP_818145.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|122272025|sp|Q03YF0|SYT_LEUMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116096621|gb|ABJ61772.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 652

 Score = 75.3 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/437 (11%), Positives = 111/437 (25%), Gaps = 81/437 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G          IR ++   I +   + G+  + TP+L   +   K     D   + +F 
Sbjct: 265 SGLPVWLPNGATIRRQVERYITDKELSNGYQHVYTPVLSNLNLY-KTSGHWDHYREDMFP 323

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+++ LR                             VF ++          I  
Sbjct: 324 PMDMGDGEFLELRPMNCPS--------------------HIMVFNHKPRSYRELPMRIAE 363

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A   +  +   TL           +    + IL  ++   G++ D  + 
Sbjct: 364 LGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMM---GVYRDFNIK 420

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D+         L +   D+ + +   + E +
Sbjct: 421 DYRFRLSYRDPKNT----------EKYFDDDEMWEKSQKQLKTAMDDLGLDYFEAEGEAA 470

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   I                +   + 
Sbjct: 471 FYGPKLDVQTKTALGNEETLSTIQLDFLLPERFDLKYIGRDGLDNHRPVMLHRGIVGTME 530

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 531 RFTAYLIEMYKGAFPTWL------------------------------------------ 548

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  ++  +   +      Q L+ AG+RA +    +K  G  ++ A     P 
Sbjct: 549 --SPLQVQIIPVNLGAHG-NYANAVQQKLQDAGLRANVETKDAK-MGYLIREAQTNKIPY 604

Query: 432 AIIQGTGERSRGMLQIK 448
            ++ G  E +   + ++
Sbjct: 605 TLVLGDSEVNSNTVTVR 621


>gi|312115092|ref|YP_004012688.1| tRNA synthetase class II (G H P and S) [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220221|gb|ADP71589.1| tRNA synthetase class II (G H P and S) [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 374

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 65/181 (35%), Gaps = 7/181 (3%)

Query: 21  KEIRIRNRILDSIRNIYENY---GFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
           +  +    +      I   +   G+  +    ++ +      + ++ R     +   D +
Sbjct: 4   EGAKEFEALEAQAAAIMTLFAAKGYVRVAPAFIQPASLFLDRIGEKLRAR--TYIFSDPN 61

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           GQ + LR DLT P+AR   E           Y         K    R R+F Q  ++  G
Sbjct: 62  GQELCLRPDLTLPVARVFLERGAAEGVSKFCYNGPAFRIQAKPERLRTREFRQAGIEYYG 121

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +    AD E+  +  D + + G+   D+ I + +  ++  +L  + +    +        
Sbjct: 122 ARGIDADLEVMALTLDAVRSCGVL--DFTIRVGHIGLVRALLNALDMPQRWRDRLARAFR 179

Query: 198 R 198
           R
Sbjct: 180 R 180


>gi|320101395|ref|YP_004176987.1| threonyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753747|gb|ADV65505.1| threonyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 611

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/388 (10%), Positives = 93/388 (23%), Gaps = 9/388 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +                +            F     +      +       +     L  
Sbjct: 213 HMRYGPHAVSIMESVMRYSWMVAQSLGIPVFKVMGSNMFNLKEKPVYEHAVLFGDR-LYE 271

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
           V +  + + +          +L    +   +       V  +  +L++ G   +   L +
Sbjct: 272 VQLDEDRFVLRYAACHQQFAMLRDWVISYKEMPFGAFEVADSY-RLEQRGELALCFRLRK 330

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN----ELV 273
               +    T+  N   E    + S +  +  K       L   T    + +     E V
Sbjct: 331 FYMPDLHILTRDINEAIEVSMRVQSKIHEEAGKVGRSYVALYNITDEFLEKYRDKLVEFV 390

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
              +         + I      V             I  F +            V   G 
Sbjct: 391 KREKYPVLLAVIPSGIYYWVLNVEYHIVDNLNRPREIATFQIDVGNGARFNITYVDEKGE 450

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
               V            +   +      +++   +      M PV    +    +     
Sbjct: 451 KHHPVIIHTAILGGVERYIYMVLDTAALMEAKGQTPYIPTWMSPVQARVIPVSREFNEHA 510

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 L + G R ++     +  G +++ A R   P  I+ G  E + G L ++     
Sbjct: 511 FKVAGELASRGFRVDVD-DRDETLGKKIRDAGREWVPYIIVIGEREVATGTLNVRVRRSN 569

Query: 454 KELSREIKNNESWREARVAQITIPISEL 481
            +    ++         V     P  E+
Sbjct: 570 DQKVMRLEEFIDLLNREVEGY--PRVEM 595


>gi|15669383|ref|NP_248192.1| threonyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|1591826|gb|AAB99201.1| threonyl-tRNA synthetase (thrS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 624

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/342 (11%), Positives = 101/342 (29%), Gaps = 25/342 (7%)

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
           E+ +  A       +K++ Y +       L  +      +        L  LR     D 
Sbjct: 285 ELMLRFAACFGQFMMKKDMYLLPRYLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDM 344

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
             +        E       +  K  +  +    ++  F     ++     +++ K     
Sbjct: 345 HTVCLNLEQAMEEFEKQFWECLKTGDDLNLSYSVIFRFTKDFFDEHRDWFFKIAKEY-KN 403

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           + G + ++ I    +        I +  ++ R +E  T       +   V + K+  +  
Sbjct: 404 KYGKDVILEILPKRKHYWVGKVDIAVIDSLGRPIENPT-------VQIDVESAKRFDIKV 456

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
                G  Y  ++      ++      +     I A     ++      + P+ +  +  
Sbjct: 457 H-TNEGEIYPIILHCSPTGSIERVLCGLLEKAAIEA--EKGNAPMLPVWLSPIQVRVIPV 513

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
                       + LR   IRA+      ++   +++ A +   P  ++ G  E     L
Sbjct: 514 AERHYDYALKVAEKLRENNIRADFD-DREESVSKKIRNAGKEWVPYVVVIGDEEMESDKL 572

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
            +                E     +  +  + + EL+  +KK
Sbjct: 573 TV-------------TIREKSTLKKPYKEKMTLDELIERIKK 601


>gi|195053732|ref|XP_001993780.1| GH19296 [Drosophila grimshawi]
 gi|193895650|gb|EDV94516.1| GH19296 [Drosophila grimshawi]
          Length = 1587

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 58/475 (12%), Positives = 123/475 (25%), Gaps = 46/475 (9%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL                N     L    G  + L 
Sbjct: 977  LIEFVKAKVVNVFRKHGAIEVDSPLLSPL------SARNINVNNNAVHLMTHSGSVVLLP 1030

Query: 85   YDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N   ++               N          F            + 
Sbjct: 1031 CDLRTQFARHVTMNGVNLIRRYCVDRVYREERVFNFHPKQNYECCFDIITPSTSSQLVDA 1090

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   +A  L ++  ++ +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1091 ELLSLAFEIASELPSL--RKRNVAIRMNHTNLLRSILMYCNVPRSQYGALFEGYMDFIEG 1148

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                        L    +      +   NL    +   +   S            +    
Sbjct: 1149 RISRF-----QFLSSIMSIVEKSRSAAQNLMDMLLANFLLTGSRSSVDESALKSLMRGKG 1203

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
             A       L  +  +V  +        I       + +        +       +  + 
Sbjct: 1204 EAASLACAALRELETVVGLAYSLGVTCPIHIWAGLPISFDRASTGGIVWQMTADLKPNRS 1263

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNVP---------ATGFSIGISRLIVALKSLESSTNNIK 373
                 +  G RYD ++  F+ Q                +     L   + ++        
Sbjct: 1264 GHPSVLAMGERYDAMLHEFQKQAQSFNAALPTRGVLSGAGLSFSLDKLVAAVGMEYAKDC 1323

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                + I         L       ++L + GIR  +   +S         A R      I
Sbjct: 1324 RAIDIGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIVETASGGGDEAQDLA-RLGALHVI 1381

Query: 434  IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            +        G L+++                S+   R  +  +  +ELV  ++K+
Sbjct: 1382 LVAE----NGSLRVR----------------SFERDRFQERHLTRAELVEFIQKM 1416


>gi|217976887|ref|YP_002361034.1| prolyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254782909|sp|B8EP84|SYP_METSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217502263|gb|ACK49672.1| prolyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 440

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/462 (11%), Positives = 111/462 (24%), Gaps = 60/462 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  ++ + +R      G   +  P L+ +D L +     +  
Sbjct: 31  MIRQEAAGIYSWLPLGLRVLQKVAEIVRQEMNRAGAIELLMPTLQLAD-LWRETGRYEAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       D+   + R    ++  +       +       ++   G
Sbjct: 90  GPEMLRIKDRHEREMLYGPTNEDMITAIFRSYVRSYRELPKILYHIQW-KFRDEQRPRFG 148

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
             R       D      + A A +                               +  + 
Sbjct: 149 VMRGREFLMKDAYSFDVDEAAARLAYN-------------------------RMFVSYLR 183

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           +     L    +             + + L                  +  E ID     
Sbjct: 184 IFARMGLRVIPMRAETGPIGGDQSHEFIILAETGESAVYCDAGVLNLPIPDETID----- 238

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              DL   + +   L   T              ++     +     +      RG+E   
Sbjct: 239 YDGDLSPIVKQWTSLYAATE-------------DVHDAERFALETTEGQRIETRGIEVGQ 285

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +      P+      P        GG Y   VSR                   +   
Sbjct: 286 VFFFGDKYSKPMNANIAGPDGVERPFQGGSYGVGVSRLV-----GALIEANHDEAGIIWP 340

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +  +          V     D   + L            AG+   ++  S+   G +   
Sbjct: 341 ASVAPFKVGIANLKVGDAATDAACEKLLAALE------KAGVDV-LYDDSADRPGAKFAK 393

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            D    P   I G    + G ++IK  A G+ +   +     
Sbjct: 394 LDLIGLPYQAIVGPKGLAEGKIEIKTRASGERVELSLDEAIE 435


>gi|298368808|ref|ZP_06980126.1| proline--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282811|gb|EFI24298.1| proline--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 569

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 72/566 (12%), Positives = 155/566 (27%), Gaps = 98/566 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +   ++     +   + 
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLGLEFRPVAADTGSIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       + TK      + 
Sbjct: 204 GTDSHEFQVLAESGEDVIAYSDTSDYAANVELAPTLPLKGERAA-AQAELTKVHTPNVKT 262

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           ID +V FLSI +EK++                     HE  ++    +AG K    +   
Sbjct: 263 IDSLVDFLSIPIEKTLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMADP 322

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +  + G N   +       +   ++ T    + ++G    +       FG       +
Sbjct: 323 AAIRAQFGANGGSLGPVGFTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEF 382

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 383 VDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 442

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M P  +  +  +                 L  AG
Sbjct: 443 GIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYTELLAAG 502

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
               +     +  G  L  ++    P  I+ G      G ++                  
Sbjct: 503 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNVE-----------------Y 544

Query: 465 SWREARVAQITIPISELVSTVKKILQ 490
           + R    AQ T+P  E+ + V   L+
Sbjct: 545 AERRDNEAQ-TVPTDEIAAKVLAALK 569


>gi|307718495|ref|YP_003874027.1| ATP phosphoribosyltransferase regulatory subunit [Spirochaeta
           thermophila DSM 6192]
 gi|306532220|gb|ADN01754.1| ATP phosphoribosyltransferase regulatory subunit [Spirochaeta
           thermophila DSM 6192]
          Length = 364

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 2/168 (1%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R ++PRG      +E  +   ++ ++ ++Y + G+ P++TP+ ++ D     L  +    
Sbjct: 24  RLQIPRGTEQLLQEEALLHRFVVRTLEDLYLSQGYLPVQTPVFDFFDIYRPLL--DPAVQ 81

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              + L D +G  + LR D+T  LA+ +         P R +    + R+E        +
Sbjct: 82  AKTYRLVDREGDILMLRSDITLFLAKQLGTTVAPEDLPLRVFYADTILRHEGQEDISHDE 141

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           + Q  V+ +G      D E+  ++A TL    +  +  HIG      L
Sbjct: 142 YFQAGVELLGLPGPEGDLEILTLLAHTLSLFDLPPHTLHIGSKRLFSL 189


>gi|289428132|ref|ZP_06429834.1| anticodon binding domain protein [Propionibacterium acnes J165]
 gi|289158675|gb|EFD06877.1| anticodon binding domain protein [Propionibacterium acnes J165]
          Length = 128

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +    +  +  +  ++    LR+ GI  E+   + K FG Q+K+ADRR  P     G   
Sbjct: 30  VLVAVNTEEDRATSEVIASALRSRGIPCEVAPKADK-FGKQIKHADRRGIPFVWFPGVKH 88

Query: 440 RS-RGMLQIKDLAKGKELSRE 459
              R    +KD+  G ++  +
Sbjct: 89  ADYRDADTVKDIRSGDQVEAD 109


>gi|228474993|ref|ZP_04059721.1| proline--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270978|gb|EEK12366.1| proline--tRNA ligase [Staphylococcus hominis SK119]
          Length = 566

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 72/542 (13%), Positives = 148/542 (27%), Gaps = 83/542 (15%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   IR   EN     I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNHISRIIREEMENIDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVF 115
                  +  L+D +G+  +L     ++   + R       +   T+      +R     
Sbjct: 86  WGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRDELKSYKQLPLTLFQIQSKFRDEKRP 145

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R        F            +S +    EM    +   + VGI   +    + +   +
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDQTYQEMYNAYSRIFKRVGI---NARPVVADSGAI 202

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----------NSGD 225
            G      +   +   + ++     D         VK    E  TD          N   
Sbjct: 203 GGHHTHEFMALSEIGEDTIVYSENSDYAANIEKAEVKYYPNEKHTDIKSLEKIETPNIKT 262

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSM------------------------------HEL 255
             + A+  +  ID +V  +   ++                                  E+
Sbjct: 263 AQELADFLNRPIDEIVKTMIFKVDGEFMMFLVRGHHELNDVKVKAYFETDSVEMATQDEI 322

Query: 256 YELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             L+               +   +  V     +           I++ + R         
Sbjct: 323 VNLLGANPGSLGPIHNKDIKIIADNFVKDLNNIVIGANEDGYHYINANVERDFNIDEYGD 382

Query: 307 YEAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSI 353
           +  IL    +++      F            G +Y   ++     N           + I
Sbjct: 383 FRFILEGEPLSDGSGNAKFAEGIEVGQVFKLGTKYSEAMNAKFIDNQGKAQPLIMGCYGI 442

Query: 354 GISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           G+SR + A+    +         ++      LIT      + L         L  +    
Sbjct: 443 GVSRTLSAIVEQNNDENGIIWPKSVTPFDLHLITINPKKEEQLELGDKLYSEL-QSKYDV 501

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            ++    +  G +   AD    P+ I+ G    S G++++K    G+     I   ++  
Sbjct: 502 -LYDDRKERAGVKFNDADLIGLPIRIVVGKN-ASEGIVEVKVRQTGESEEVHINELDNHI 559

Query: 468 EA 469
            +
Sbjct: 560 AS 561


>gi|257094479|ref|YP_003168120.1| ATP phosphoribosyltransferase regulatory subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257047003|gb|ACV36191.1| tRNA synthetase class II (G H P and S) [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 385

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 6/182 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   LP   AD    E     R+   + +++  +G++ +  PLLE+ +SL      + + 
Sbjct: 1   MNWLLPEHIADALPLEAAHIERLRRLLLDLFRVHGYELVMPPLLEHLESLLTGSGQDLKL 60

Query: 67  NKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               F   D   G+ + +R D+T  +AR  A +        R      V           
Sbjct: 61  R--TFKCVDQLSGRTLGVRADMTPQVARIDA-HLLNRQGVTRLCYCDSVLHTLPASLAAS 117

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+ IQ   +  G +   AD E+  +MAD+L   G+      I + +  +   + +  GL 
Sbjct: 118 REPIQIGAELFGHAGVAADHEIIRLMADSLRCAGVPA--VRIDLGHVGVFRALADAAGLS 175

Query: 186 GD 187
           GD
Sbjct: 176 GD 177


>gi|254672194|emb|CBA05078.1| ATP phosphoribosyltransferase regulatory subunit [Neisseria
           meningitidis alpha275]
          Length = 293

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 3/147 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP   AD      R      + +  ++  +G++ ++ PL+EY+ SL   +      +  
Sbjct: 5   QLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAG--LSLK 62

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
              + D   G+ + +R D+T  +AR  A          R    GPV   +  G    R+ 
Sbjct: 63  TILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGPVLHAQPDGLLNMREP 122

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTL 155
           +Q   +  G +    D E+  +M  ++
Sbjct: 123 LQAGAEMYGFADIRGDIELIDLMLKSM 149


>gi|114569925|ref|YP_756605.1| prolyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122316107|sp|Q0APX0|SYP_MARMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114340387|gb|ABI65667.1| prolyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 444

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 53/468 (11%), Positives = 111/468 (23%), Gaps = 73/468 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  +I   +R   +  G   +  P ++ +D L +     D  
Sbjct: 31  MIKQEAAGIYAWLPLGHRVLRKIEQIVREEQDRAGAVELLMPTIQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  + D   + +       ++   + R   +++  +       +             
Sbjct: 90  GDEMLRITDRHDRDMLFGPTNEEMITDIFRSYCKSYKDVPKLLYHIQWKFRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D   ++A  +   M +   +T   +G+K                  
Sbjct: 150 MRGREFLMKDAYSFDVDEAAARRSYNRMFVAYLNTFARLGLKAVPMQADTGPIGG----- 204

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                           +      L + G   V                  A+L       
Sbjct: 205 ---------------DLSHEFIVLAETGESEV---------------FCHADLVEMGAPG 234

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +      DL+  + +   L   T    +                  +          RG+
Sbjct: 235 LDVDFDGDLQPLVDQRTALYAATEEMHQPEE--------------FAAVPADRQLSARGI 280

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           E      +      P+    Q           G Y               G S  +  +I
Sbjct: 281 EVGHIFNFGTKYSEPMKATVQHQDGQPRPVHMGSY-------------GVGVSRLLGAII 327

Query: 360 VALKSLESSTNNIKEMGP-VLITTMDHDSDSLSKYQMYTQM-LRTAGIRAEMFLGSSKNF 417
            A    +              I  M    ++           L  AG+        S+  
Sbjct: 328 EAHHDEKGCIWPESVAPFGAGIINMRVGDEACDAACETAYQGLVKAGLDPLYDDTDSRA- 386

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           G +   AD    P  ++ G      G +++K    G+      ++  S
Sbjct: 387 GAKFATADLIGLPYQLVVGPRGLKEGKIELKVRRTGETHEMSPEDAVS 434


>gi|256828741|ref|YP_003157469.1| prolyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577917|gb|ACU89053.1| prolyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 580

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R  N++ + +R      G   I  P+++ +D L +     D  
Sbjct: 31  MIRKLTSGIYTYMPLGLRAINKVANIVREEMNRAGAQEISMPMVQPAD-LWQESGRWDFY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +  L+D  G+   L         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRLKDRHGRDYCLGPTHEEVITDLIRGEVRSYRQLPINLYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D        +   M          +G
Sbjct: 150 MRGREFIMKDAYSFDKDDEGVNASYQAMYDAYTRVFTRLG 189



 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 5/111 (4%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I      ++     D   ++K +     L + GI         +  G +   AD 
Sbjct: 467 IFPPSIAPFEITILAMSTKDEKVMAKGREIHDWLESQGIDTLFDDRDER-PGVKFNEADL 525

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE----SWREARVAQ 473
              P+ I+ G     +G+L++K+   G++    + + +     WR+  + +
Sbjct: 526 LGSPMQIVIGGKGLEKGVLEVKNRKTGEKRELPVADWQNAVLEWRKEVMKE 576


>gi|239827997|ref|YP_002950621.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259516491|sp|C5D639|SYT_GEOSW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239808290|gb|ACS25355.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 644

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 60/479 (12%), Positives = 135/479 (28%), Gaps = 99/479 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+  + TP+L   +   K     D     +F  
Sbjct: 265 GLPLWLPKGATIRRIIERYIVDKEIELGYQHVYTPVLGSVELY-KTSGHWDHYKDNMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEQLVLRPMNCP-------HHMMIYKSKIHSYRELPIRIAELGTMHRYEMS----- 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    I      I    +++++ ILE     G D+ + R
Sbjct: 372 --------GALSGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKDFGLDEYSFR 423

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L      DK   +    +     E   +   +      L   + +   +F    L+    
Sbjct: 424 LSYRDPHDKEKYYDDDEM----WEKAQNMLREAMDELGLEYYEAEGEAAFYGPKLDV--- 476

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           ++   +           + ++  E    +    +       ++      T   + A L  
Sbjct: 477 QVRTALGKDETLSTVQLDFLLP-ERFDLTYIGEDGKPHRPVVIHRGVVSTMERFVAFLIE 535

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                             G +   ++  + + +P +  +                     
Sbjct: 536 EYK---------------GAFPTWLAPVQVEVIPVSPAAH-------------------- 560

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                           L       + L++ G R E+     +  G +++ A  +  P  +
Sbjct: 561 ----------------LDYAYKVKEALQSQGFRVEVD-ERDEKIGYKIREAQIQKIPYML 603

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           + G  E +   + ++    G++ S                 T+ + + ++ +K  ++ N
Sbjct: 604 VVGDKEMAENAVNVR--KYGEQKS----------------ETMSLDDFIAALKAEVRRN 644


>gi|323142328|ref|ZP_08077160.1| proline--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413212|gb|EFY04099.1| proline--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 569

 Score = 74.9 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 76/268 (28%), Gaps = 22/268 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K T        G         R+  +I + IR   ++ G   I  P+++ ++   K  
Sbjct: 32  MRKSTN-------GMYTYLPLAWRVIKKIENIIREEMDHAGCQEIMMPIMQPAEI-WKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPL----ARYVAENFDTIVFPCRTYRIGP 113
              D     +  L+D  G    L     ++   L     R   +    +      +R   
Sbjct: 84  GRWDAYGAEMVRLKDRHGHEYCLGPTHEEMVTTLVKNDVRSYRQLPLNLYQIQDKFRDER 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
             R        F        D   +  + +   M           G+             
Sbjct: 144 RPRFGLMRSRDFIMKDGYSFDRDEAGLDVSYKAMYDAYDKIFTRCGLNFRPVEADSGAIG 203

Query: 174 ILDGI-LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
                    +   G+ ++        A D      ++  +L   +   +   + ++    
Sbjct: 204 GTGSHEFMVLADSGEAEITYCTKCDYAAD------IEKAELYPIKAPAEEMQELSEVETP 257

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVK 260
             + I  + +FL+  +EKS+  +    +
Sbjct: 258 NCKTIADVCAFLNAPIEKSVKAVAYQCE 285



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 1/88 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +++     D  S +K +     L  AG+   +     +  G + K AD 
Sbjct: 462 IWPVAIAPYEVLVVPVNVKDEASFAKAEKIYNELHKAGVEVVIDDRKER-PGVKFKDADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              PL ++ G      G L++K    G+
Sbjct: 521 IGYPLRVVVGPKTLQTGELEVKVRKTGE 548


>gi|314936576|ref|ZP_07843923.1| proline--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655195|gb|EFS18940.1| proline--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 566

 Score = 74.5 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 72/542 (13%), Positives = 148/542 (27%), Gaps = 83/542 (15%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   IR   EN     I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNHISRIIREEMENIDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVF 115
                  +  L+D +G+  +L     ++   + R       +   T+      +R     
Sbjct: 86  WGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRDELKSYKQLPLTLFQIQSKFRDEKRP 145

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R        F            +S +    EM    +   + VGI   +    + +   +
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDQTYQEMYNAYSRIFKRVGI---NARPVVADSGAI 202

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD----------NSGD 225
            G      +   +   + ++     D         VK    E  TD          N   
Sbjct: 203 GGHHTHEFMALSEIGEDTIVYSENSDYAANIEKAEVKYYPNEKHTDIKSLEKIETPNIKT 262

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSM------------------------------HEL 255
             + A+  +  ID +V  +   ++                                  E+
Sbjct: 263 AQELADFLNRPIDEIVKTMIFKVDGEFMMFLVRGHHELNDVKVKAYFETDSVEMATQDEI 322

Query: 256 YELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             L+               +   +  V     +           I++ + R         
Sbjct: 323 VNLLGANPGSLGPIHNKDIKIIADNFVKDLNNIVIGANEDGYHYINANVERDFNIDEYGD 382

Query: 307 YEAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSI 353
           +  IL    +++      F            G +Y   ++     N           + I
Sbjct: 383 FRFILEGEPLSDGSGNAKFAEGIEVGQVFKLGTKYSEAMNAKFLDNQGKAQPLIMGCYGI 442

Query: 354 GISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           G+SR + A+    +         ++      LIT      + L         L  +    
Sbjct: 443 GVSRTLSAIVEQNNDENGIIWPKSVTPFDLHLITINPKKEEQLELGDKLYSEL-QSKYDV 501

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            ++    +  G +   AD    P+ I+ G    S G++++K    G+     I   ++  
Sbjct: 502 -LYDDRKERAGVKFNDADLIGLPIRIVVGKN-ASEGIVEVKVRQTGESEEVHINELDNHI 559

Query: 468 EA 469
            +
Sbjct: 560 AS 561


>gi|146414982|ref|XP_001483461.1| hypothetical protein PGUG_04190 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1613

 Score = 74.5 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 77/504 (15%), Positives = 146/504 (28%), Gaps = 63/504 (12%)

Query: 15   FADCPTKEIRIRNRILDSIRNIYENYGFDP-----IETPLLEYSDSLGKFLPDEDRPNKG 69
              D       + + ++D++  I+  +G        I  P    S +L             
Sbjct: 1002 TRDYL-----LFSNMIDTLFGIFRLHGAIEDYSSDILLP---KSQNLSAG---------Q 1044

Query: 70   VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGRFRQ 127
            V+ + D  G  +SL YDL  P AR+++ N   I             +             
Sbjct: 1045 VYDVLDRSGTVLSLPYDLILPKARFLSRNNIDIAKLYCHEFVYRPNIRGPGTPDKYSSVN 1104

Query: 128  FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
            F     D        A+     ++ + L      +      +      D I   I     
Sbjct: 1105 FDITTHDRSLLPINDAEC--LKVVDEILHHFPCFKAKGSQCLILINHSDIINSVITFAFG 1162

Query: 188  DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +           I  L + G++     +     ++            +  + M      D
Sbjct: 1163 NIGISDRKRHEVIGVLSQLGIEKSPEEIKRYLREDFNVPHTVTRDLVDTFNFMGE--PDD 1220

Query: 248  LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
              + + +        +  EK    ++ +  ++RK G  S       +      Y  G ++
Sbjct: 1221 ARRKLKKAMVDSPYFVKVEKALVYIMDVLSILRKFGVKSGVYLSPLSNYNCQYYTGGIMF 1280

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN------VPATGFSIGISRLIVA 361
            +AI              F  V  GGRYD LVS     +        A G  +  + L + 
Sbjct: 1281 QAIFRLDTKRR------FARVLTGGRYDKLVSSLANVDINKAITPHAVGLLLTSTFLFLL 1334

Query: 362  LKSL-----ESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSK 415
            LKS      E  +          +     +   +        Q L    I  +    +S+
Sbjct: 1335 LKSRKIGPNEKYSETQWRGTRCDVLITSTNKSLVRLAGFEIAQSLWKNRISCDFAYSASQ 1394

Query: 416  NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               + +  A +  C   +       +  +L++K        SR   +N      R  Q  
Sbjct: 1395 T--DIMDQAAQDGCGWIVFIKQ---TNSLLRVK--------SRRGPSNFKPLRVRSVQSE 1441

Query: 476  IPIS----ELVSTVKKILQENKEE 495
                    ELV  + + +  + E+
Sbjct: 1442 KDTDLEYEELVPFLAEEINGSNED 1465


>gi|223039089|ref|ZP_03609380.1| tRNA synthetase class II core domain [Campylobacter rectus RM3267]
 gi|222879728|gb|EEF14818.1| tRNA synthetase class II core domain [Campylobacter rectus RM3267]
          Length = 289

 Score = 74.5 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 8/108 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G      +  +++ +I  +   I E  GF  I TP   Y   L             +
Sbjct: 13  IPSGTRLYFGQSAKLKRKIERTASEILEKNGFHEIVTPFFSYHQHLS-------VQPTAL 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
               D +   ISLR D T  + R V         P R + I PVF+  
Sbjct: 66  VRFSDHENHQISLRADSTVDVVRIVL-RRLKDTEPKRWFYIQPVFKYP 112


>gi|323475075|gb|ADX85681.1| threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus REY15A]
 gi|323477807|gb|ADX83045.1| threonyl-tRNA synthetase editing domain protein [Sulfolobus
           islandicus HVE10/4]
          Length = 386

 Score = 74.5 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 48/133 (36%), Gaps = 2/133 (1%)

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEM-GPVLITTMDHDSDSLSKYQMYTQMLR 401
             N   T   +G       L+S+      + +   P+ +  +    D L       + LR
Sbjct: 240 WVNESRTYVDVGRLVYYFILESIRKQPPTLPDWLNPIQVRLLPVKKDFLDFSIQVAERLR 299

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             GIR  +      + GN+++ A     PL II G  E     L +K  A  ++ S  I+
Sbjct: 300 KEGIRVNIDDLDD-SLGNKIRRAGTEWIPLVIIIGEREVKTSTLTVKIRANNEQKSMSIE 358

Query: 462 NNESWREARVAQI 474
                 +  V + 
Sbjct: 359 ELVKEIKDEVKER 371


>gi|195165850|ref|XP_002023751.1| GL27249 [Drosophila persimilis]
 gi|194105911|gb|EDW27954.1| GL27249 [Drosophila persimilis]
          Length = 1593

 Score = 74.5 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 61/483 (12%), Positives = 125/483 (25%), Gaps = 52/483 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL    S  +        N     L    G  + L 
Sbjct: 974  VFEFVKAKVVNLFRKHGAIEVDSPLLSPLSS--RNCSASANANA--VHLMTHSGCVVVLP 1029

Query: 85   YDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N   ++               N          F            + 
Sbjct: 1030 CDLRTQFARHVTMNGVNLIRRYCVDRVYREERVFNFHPKQNYECSFDIITPSAGSHLVDA 1089

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID- 201
                +   +   L  +  +  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1090 ELLSLAFEITSELPRL--RERNLVIRMNHTNLLRAILIFCNVPKSQYSALFEGTMDFIES 1147

Query: 202  ---KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
               +        V +           D      L +     +       L +   E   L
Sbjct: 1148 RISRFQFHSSITVIMEKSRTSAQTLMDMLLANFLLTGSRSSVEESALKSLMRGKGEAASL 1207

Query: 259  VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
             +G +   +   EL                  I       + +        +       +
Sbjct: 1208 ARGALRELENVVELAYSL---------GVTCPIQIWAGLPISFERASSGGIVWQMTADLK 1258

Query: 319  KQKPVVFGSVGGGGRYDGLVSRFKG---------QNVPATGFSIGISRLIVALKSLESST 369
              +      +  G RYD ++  F+                  +     L   + ++    
Sbjct: 1259 PNRSGNPSVLAVGERYDAMLHEFQRQAQSYNQTLPPRGVLSGAGLSFSLDKLVAAVGVEY 1318

Query: 370  NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                    V I         L       ++L + GIR  +   +S         A R   
Sbjct: 1319 AKDCRAIDVGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIVETASGAGDEAQDLA-RLGA 1376

Query: 430  PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
               I+        G L+++                S+   R  +  +  +ELV  ++K+L
Sbjct: 1377 LHVILVAE----NGSLRVR----------------SFERERFQERHVNRAELVDFIQKLL 1416

Query: 490  QEN 492
            +  
Sbjct: 1417 RAE 1419


>gi|23501709|ref|NP_697836.1| prolyl-tRNA synthetase [Brucella suis 1330]
 gi|81847158|sp|Q8G197|SYP_BRUSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|23347633|gb|AAN29751.1| prolyl-tRNA synthetase [Brucella suis 1330]
          Length = 442

 Score = 74.5 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 65/455 (14%), Positives = 123/455 (27%), Gaps = 67/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +         K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYGAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG---RFRQ 127
           QD   + +       ++   + R    ++  +      Y I   FR+E        R R+
Sbjct: 97  QDRQEREMLFGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRSRE 154

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F+  D  +     E A      M    L               +   + G L    +   
Sbjct: 155 FLMKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMRADTGPIGGDLSHEFIILA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +    ++   RA   L   G                 DF   A LT              
Sbjct: 215 ETGESQVYCDRAYLDLAVPGADT--------------DFRNDAQLTD------------- 247

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                     +V          +E+   ++  +           S    RG+E      +
Sbjct: 248 ----------IVTRWTTPYAATDEMHDEADWAKVK-------PESQVSARGIEVGHIFHF 290

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                 P+  + Q P            DG        +       +  + +  +      
Sbjct: 291 GTKYSEPMGAKVQGP------------DGKEHLVSMGSYGIGPSRLVAAAIEASHDDAGI 338

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       I  M   D       +   + L  AG+   +     +  G +    D 
Sbjct: 339 IWPKAIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  I+
Sbjct: 398 IGLPTQVIVGPRGVAAGEVEVKDRKMGERQSLGIE 432


>gi|213401387|ref|XP_002171466.1| eIF2 alpha kinase Gcn2 [Schizosaccharomyces japonicus yFS275]
 gi|211999513|gb|EEB05173.1| eIF2 alpha kinase Gcn2 [Schizosaccharomyces japonicus yFS275]
          Length = 1575

 Score = 74.1 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 61/466 (13%), Positives = 148/466 (31%), Gaps = 49/466 (10%)

Query: 30   LDSIRNIYENYGFDPI-ETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
             D    +++ +G     +T L   ++   +  P        +  L D +G  + L YD  
Sbjct: 989  RDRAVQVFKRHGAKERKQTVLFPKTNLYTQSQP--------LVKLLDSNGTLLQLPYDNV 1040

Query: 89   APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE-TADAEM 147
             P AR VA              +      E    GR     +   D    S         
Sbjct: 1041 LPYAREVA----RSTSEELKTYLDSHVYRELPAGGRPFSVHELSFDIASYSDHLEWYDAE 1096

Query: 148  CMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFG 207
             M + D L +         I IN+  I + I+E + +  + +     I+ +         
Sbjct: 1097 VMKVIDELMSEFPSLQKGCIRINHADIFNAIMEYLKVDREKRARVSTIISQVS---QNAS 1153

Query: 208  LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKSMHELYELVKGTIAGE 266
            +  ++  L                + S  +D ++ F   ++ E+ +  L  +   ++  +
Sbjct: 1154 ITRIRNQLRSEFL-----------VPSTTLDELLLFDYCLEFEEGVSRLLGIFDSSLKEK 1202

Query: 267  --KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
                 N L  I    ++   +         +     Y  G +++AI      +       
Sbjct: 1203 VMPAINNLRQIMSFAKELQLSFPVYFAPLCVYNLNFYTGGVMFQAINTIDHSDVVIAGGR 1262

Query: 325  FGSVGGGGRYDGLVSRFKGQNVPA-----------TGFSIGISRLIVALKSLESSTNNIK 373
            + ++    +YD  + R   +               +      S L  +++  + ST+ I 
Sbjct: 1263 YDALV--RQYDPPLLRTARRKHAVGITVALEKLVHSMTRYVHSSLKKSMRGKKFSTSTIP 1320

Query: 374  EMGPVL----ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                +     +       DSL++     ++L    I+A++    + +    +        
Sbjct: 1321 LNNWIPRRLDVIVASIGKDSLTEKCAVLRILWALNIKADVLHKGATSLEEVVTRFRNDGI 1380

Query: 430  PLAIIQ-GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
               ++        +  +++++++KG++     +    W  + + + 
Sbjct: 1381 NWVLVVRQKNTAMQNSIKVRNISKGEDYEIRTEEIGLWMLSEINER 1426


>gi|328543706|ref|YP_004303815.1| Prolyl-tRNA synthetase [polymorphum gilvum SL003B-26A1]
 gi|326413449|gb|ADZ70512.1| Prolyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 442

 Score = 74.1 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 57/461 (12%), Positives = 117/461 (25%), Gaps = 81/461 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +       G   +  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPLGFRVLRKIEKIVEEEQARAGAVQLLMPTIQPAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
            D   + +       ++   + R    ++  +       +                  F 
Sbjct: 97  TDRHEREMLYGPTNEEMITEIFRSYVRSYKDLPLNLYHIQWKFRDEVRPRFGIMRGREFL 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D    +A  A   M +    T   +G+K                         
Sbjct: 157 MKDAYSFDIDKEAARHAYNRMFVAYLRTFARMGLKAI----------------------- 193

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                                   ++   G    D S +F   A+     +    S L +
Sbjct: 194 -----------------------PMRADTGPIGGDMSHEFIILASTGESAVFCDRSLLDL 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                  E  + +       + +      ++ +      +   +      RG+E      
Sbjct: 231 PTPG---EDTDFLSDLSPIVEAWTTPYAATDEMHDETTFAALPEAERVSARGIEVGHIFY 287

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +      P+                G Y                  +G+SRL+ AL    
Sbjct: 288 FGTKYSEPMGARVMTAEGTEVPVHMGSY-----------------GVGVSRLLGALIEAN 330

Query: 367 SSTNNIKEMGPVLITTMD------HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
              + I     V    +        D+D+ S        L   G+   ++       G +
Sbjct: 331 HDDDGIIWPASVAPFHVGLINLKPGDADTDSACAGLYARLEAVGVEV-LYDDVDTRAGAK 389

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
               D    P  II G      G++++K+ A G+  S  ++
Sbjct: 390 FATMDLIGLPFQIIAGPRGLKDGVVEVKERASGQRESLSLE 430


>gi|304315915|ref|YP_003851060.1| prolyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302777417|gb|ADL67976.1| prolyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 570

 Score = 74.1 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R +L  G         R+  +I + +R   +  G   +  P +  ++ L K  
Sbjct: 26  MLKAAMMR-KLASGVYIYLPLGKRVLKKIEEIVREEMDRAGAQEVLMPAIIPAELL-KES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +F L+D + +   L  
Sbjct: 84  GRWDVFGPEMFKLKDRNDREFCLGP 108



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 48/163 (29%), Gaps = 24/163 (14%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE----SSTNNIKEMGPVLITTMDHD 386
           G  Y       K   +   G  +         ++ +        +I     +++     +
Sbjct: 424 GANYIDENGNEKPMIMGCYGIGLNRIAAAAIEQNHDDKGIIWPMSIAPYHAIVVPVNVSN 483

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
               +  +     L  AGI   +     +  G +   AD    P+ I  G    S  +++
Sbjct: 484 DAQRNLAEKIYDELSKAGIETLIDDRDLRA-GVKFNDADLLGIPIRITVGKK-ASDNIVE 541

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
           +K                         I +   E+V+ VK+++
Sbjct: 542 LK------------------LRRDENSIELNYDEVVNKVKELI 566


>gi|227432351|ref|ZP_03914343.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
 gi|227351872|gb|EEJ42106.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
          Length = 652

 Score = 74.1 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/437 (11%), Positives = 109/437 (24%), Gaps = 81/437 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G          IR ++   I +   + G+  + TP+L   +   K     D   + +F 
Sbjct: 265 SGLPVWLPNGATIRRQVERYITDKELSNGYQHVYTPVLSNLNLY-KTSGHWDHYREDMFP 323

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+++ LR                             VF ++          I  
Sbjct: 324 PMDMGDGEFLELRPMNCPS--------------------HIMVFNHKPRSYRELPMRIAE 363

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A   +  +   TL           +    + IL  ++   G++ D  + 
Sbjct: 364 LGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMM---GVYRDFNIK 420

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
                L   D  +            +   D+         L +   D+ + +   + E +
Sbjct: 421 NYRFRLSYRDPKNT----------EKYFDDDEMWEKSQKQLKTAMDDLGLDYFEAEGEAA 470

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   I                +   + 
Sbjct: 471 FYGPKLDVQTKTALGNEETLSTIQLDFLLPERFDLKYIGRDGLDNHRPVMLHRGIVGTME 530

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 531 RFTAYLIEMYKGAFPTWL------------------------------------------ 548

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  ++  +   +      Q L+ AG+RA +    +K  G  ++ A     P 
Sbjct: 549 --SPLQVQIIPVNLGAHG-NYANAVQQKLQDAGLRANVETKDAK-MGYLIREAQTNKIPY 604

Query: 432 AIIQGTGERSRGMLQIK 448
            ++ G  E     + ++
Sbjct: 605 TLVLGDSEVDSNTVTVR 621


>gi|315187031|gb|EFU20788.1| tRNA synthetase class II (G H P and S) [Spirochaeta thermophila DSM
           6578]
          Length = 364

 Score = 74.1 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 2/168 (1%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
           R ++PRG      +E  +   ++ ++ ++Y + G+ P++TP+ ++ D     L  +    
Sbjct: 24  RLQIPRGTEQLLQEEALLHRFVVRTLEDLYLSQGYLPVQTPVFDFFDIYRPLL--DPAVQ 81

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              + L D +G  + LR D+T  LA+ +         P R +    + R+E        +
Sbjct: 82  AKTYRLVDREGDILMLRSDITLFLAKQLGTTVAPEDLPLRVFYADTILRHEGQEDISHDE 141

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           + Q  V+ +G      D E+  ++A TL    +  +  HIG      L
Sbjct: 142 YFQAGVELLGLPGPEGDLEILTLLAHTLSLFDLPPHALHIGSKRLFSL 189


>gi|329850610|ref|ZP_08265455.1| prolyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840925|gb|EGF90496.1| prolyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 443

 Score = 74.1 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/461 (9%), Positives = 119/461 (25%), Gaps = 65/461 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++  ++   +       G   +  P L+ +D L +     +  
Sbjct: 31  MIRQQAAGIYAWLPLGLKVLRKVERIVEEEMARAGSIQLLMPTLQLAD-LWRESGRYEDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  ++D   + +       +    + R   +++  +      Y+I   FR+E+    
Sbjct: 90  GQEMLRIKDRHDRDLLYGPTAEEAVTEVFRASVKSYKDLP--LNLYQISWKFRDEQRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S      +         +  +             R  L  +     
Sbjct: 148 GVMRGREFLMKDAYSFDVDEASARKAYNRMFIAYLNTFS---------RMGLKAV----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      ++   G    D S +F   A+     +      
Sbjct: 194 --------------------------PMRADTGPIGGDLSHEFIILADTGESAVFCHKDL 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR-IKISSTIVRGLEYY 302
           + +       +  +L          +     + +         ++ +      V  + Y+
Sbjct: 228 VDMPAPGHDVDWNDLQGLVDQRTALYAATEEMHDEAAFGEVPEDKKLSARGIEVGHIFYF 287

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
                + +       + +  V  GS G G             +                 
Sbjct: 288 GEKYSKPMKATVNGPDGEVTVHMGSYGVGVSRLLGAIIEASHDEAGI------------- 334

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                   ++      +I     D    +  +     L  AG    ++  + +  G +  
Sbjct: 335 ----IWPESVAPFDVAVINLRPGDEACDAACEKAYAALTAAGRDV-LYNDTDERPGAKFA 389

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             D    P  +I G    + G +++K  A G+  +    + 
Sbjct: 390 SMDLIGIPWQLIIGPKGLAEGKVELKQRATGERQTALFDDV 430


>gi|163732867|ref|ZP_02140312.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter
           litoralis Och 149]
 gi|161394227|gb|EDQ18551.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter
           litoralis Och 149]
          Length = 360

 Score = 74.1 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 65/352 (18%), Positives = 118/352 (33%), Gaps = 37/352 (10%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVA 96
           +E  G   I+ P+L+ +D+L     +E R    V S      Q   LR D T P+   V 
Sbjct: 18  FEAAGAQRIDAPILQPADALLDLYGEEIRARAYVTSDALRGEQM--LRPDFTVPV---VQ 72

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA-EMCMMMADTL 155
            +      P R    G VFR ++H P R  ++ Q   +        A   E+  +    L
Sbjct: 73  MHMAHGAEPARYTYAGEVFRRQEHDPSRANEYFQVGYEVFDRENPAAADAEVFCLFETVL 132

Query: 156 EAVGIKR--NDYHIGINNRKILD-------GILEKIGLHGDDKLNERLIVLRAIDKLDK- 205
             +G++    D  I     + L         +L  I      +        R      + 
Sbjct: 133 SPLGLRAATGDIGILTAAVRGLRTTEARKSALLRHIWRPRRFRSLLDRYAGRIKPSKQRL 192

Query: 206 --------FGLQGVKLLLGEGRTDNSGDFTKG----ANLTSEQIDIMVSFLSID--LEKS 251
                        +     +   D            A L+  ++D++ + +++   +  +
Sbjct: 193 ELLAGHTAVPDAPLIGKRSQSEIDARIALLHADAATAPLSETEVDLLDALVNVRETMPFA 252

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           + +L +L     + E+    L   +E + K G + + +   ++  R          E   
Sbjct: 253 LQQLRDLAVDMPSIEQAVARLSDRAEALAKRGVDVDALPFEASYGR-------TSMEYYD 305

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           GF       K     +V  GGRYD L  R  G         +    L++ L+
Sbjct: 306 GFVFGYYHPKRHDLPAVATGGRYDALTRRLGGGAEIPAVGGVIRPDLMLMLE 357


>gi|255323047|ref|ZP_05364183.1| tRNA synthetase class II core domain protein [Campylobacter showae
           RM3277]
 gi|255299909|gb|EET79190.1| tRNA synthetase class II core domain protein [Campylobacter showae
           RM3277]
          Length = 289

 Score = 74.1 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 8/109 (7%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E+P G      +  +++ +I  +   I E  GF  I TP   Y   L             
Sbjct: 12  EIPSGTRLYFGQSAKLKRKIERAASEILEKNGFHEIVTPFFSYHQHLS-------VQPTA 64

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           +    D +   ISLR D T  + R V         P R + I PVF+  
Sbjct: 65  LVRFSDHENHQISLRADSTVDVVRIVL-RRLKDTEPKRWFYIQPVFKYP 112


>gi|315635537|ref|ZP_07890803.1| ATP phosphoribosyltransferase regulatory subunit [Arcobacter
           butzleri JV22]
 gi|315480295|gb|EFU70962.1| ATP phosphoribosyltransferase regulatory subunit [Arcobacter
           butzleri JV22]
          Length = 281

 Score = 74.1 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 6/138 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              E+P+G      K  + +  + + + +I +  GF+ I TP   YS             
Sbjct: 3   FEHEIPKGSRLYFGKLAKAKRVLENQVCDILDKAGFEEILTPNFSYSQ------HQAIAN 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +    D+  + +SLR D T  + R + +         + + + P+F        +  
Sbjct: 57  EKKLIKFSDEQNEQVSLRADSTLDVVRIITKRLGRTTKHKKWFYVQPIFSYPSTEEYQIG 116

Query: 127 QFIQCDVDNVGSSAETAD 144
                  +       TA+
Sbjct: 117 CEWIDHNNIADIMNLTAN 134


>gi|15897317|ref|NP_341922.1| threonyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284173344|ref|ZP_06387313.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|13813530|gb|AAK40712.1| Threonyl-tRNA synthetase homolog (thrS-like) [Sulfolobus
           solfataricus P2]
 gi|261601991|gb|ACX91594.1| Threonyl-tRNA synthetase editing domain protein [Sulfolobus
           solfataricus 98/2]
          Length = 386

 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 2/118 (1%)

Query: 358 LIVALKSLESSTNNIKEM-GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
               L+S++     + +   P+ +  +    D L       + LR  GIR  +      +
Sbjct: 255 YYFILESVKQQPPTLPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDD-S 313

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            GN+++ A     P  I+ G  E     L +K  A+ ++ S  ++      +  V + 
Sbjct: 314 LGNKIRRAGTDWIPFVIVIGEREVKTNTLTVKIRARNEQKSMTVEELVKEIKDEVKER 371


>gi|209964526|ref|YP_002297441.1| prolyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209957992|gb|ACI98628.1| prolyl-tRNA synthetase ProS [Rhodospirillum centenum SW]
          Length = 404

 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 52/459 (11%), Positives = 118/459 (25%), Gaps = 65/459 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  ++   +R   +  G   +  P ++ +D L K     +  
Sbjct: 1   MIRQTSAGIYAWLPLGWRVLQKVAQIVREEQDRAGAQEMLMPTIQSAD-LWKQSGRYEAY 59

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  + D   +                                      E        
Sbjct: 60  GKEMLRITDRHDR--------------------------------------EMLYGPTNE 81

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + I         S +     +  +     + +  +           K        +    
Sbjct: 82  EMITDIFKTFVKSYKDLPKNLYHIQWKFRDEIRPRFGLMRGREFLMKDNYSFDLDVEGAK 141

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  L  LR   ++    +  ++   G    D S +F   A     Q+         
Sbjct: 142 LSYRRMFLAYLRTFARMGIKAI-PMRADTGPIGGDLSHEFIILAETGESQV------FCD 194

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                +  L E        ++ F+    I     +  +++ +        RG+E      
Sbjct: 195 RRWLELDVLAEAPAPDSDLKEFFDRYTSIYAATEEM-HDAAKAPADLVTARGIEVGHIFY 253

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +      P+      P         G Y   VSR     + A+                 
Sbjct: 254 FGKKYSQPMEAIVAGPDGQPVTVEMGSYGIGVSRVVAAIIEASH------------DEQG 301

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML--RTAGIRAEM-FLGSSKNFGNQLKY 423
                      + I  +  D    ++     + L  R +G + E+ +   ++  G +   
Sbjct: 302 IIWPEPVAPFKLAIVNLKVDD---AECSRVCEDLYARLSGAKVEVLYDDRNERPGAKFAD 358

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            D    P  +  G      G++++K  A G++    +++
Sbjct: 359 MDLIGVPWQLTVGPRGLKAGVVELKRRATGEKFELSVED 397


>gi|157736404|ref|YP_001489087.1| ATP phosphoribosyltransferase regulatory subunit [Arcobacter
           butzleri RM4018]
 gi|157698258|gb|ABV66418.1| conserved hypothetical protein, putative tRNA synthetase
           [Arcobacter butzleri RM4018]
          Length = 281

 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 6/138 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              E+P+G      K  + +  + + + +I +  GF+ I TP   YS             
Sbjct: 3   FEHEIPKGSRLYFGKLAKAKRVLENQVCDILDKAGFEEILTPNFSYSQ------HQAIAN 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +    D+  + +SLR D T  + R + +         + + + P+F        +  
Sbjct: 57  EKKLIKFSDEQNEQVSLRADSTLDVVRIITKRLGRTTKHKKWFYVQPIFSYPSTEEYQIG 116

Query: 127 QFIQCDVDNVGSSAETAD 144
                  +       TA+
Sbjct: 117 CEWIDHNNIADIMNLTAN 134


>gi|313891975|ref|ZP_07825576.1| proline--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119618|gb|EFR42809.1| proline--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 574

 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 64/541 (11%), Positives = 139/541 (25%), Gaps = 74/541 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +  ++  GF        R   +I + I           I   + + ++   +  
Sbjct: 26  MLKAG-MIRKISSGFYSYLPLAWRSIKKIENIIHEEMAKIESQEILMSIAQPAEIWQQ-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGP 113
              D   + +F L+D   +   L     +L   L      ++  +          YR   
Sbjct: 84  GRWDVYGEEMFRLKDRHERDYCLAPTHEELVTTLVHMDTFSYKQLPVSLYQIQNKYRDEK 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG----- 168
             R        F        D      +    +M     +     G+             
Sbjct: 144 RPRFGLMRSREFIMKDAYTFDVDEEGLDKQYHDMYDAYTNIFTKCGLNFRTVIADSGAIG 203

Query: 169 ---INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR-TDNSG 224
               +  ++L    E   ++  D      +     D +       ++  + E    +   
Sbjct: 204 GSSSHEFEVLAEAGEADIVYEVDGEFAANVEAVIPDTISCNLKNDLEKEIVETPGQETIE 263

Query: 225 DFTKGANLTSEQI---------DIMVSFLSIDLEKSMHELYELVKG-------------- 261
           D  K   L   Q          D +V  L     +      + +                
Sbjct: 264 DVCKFLGLPVTQSIKAVIYKLDDKIVLALVRGDHEVNEVRLQNIYNAINVSMATEKDLKK 323

Query: 262 --------TIAGEKGFNELVVISEL----VRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                   +  G K   +  +I +     ++ +   +N        V     +     E 
Sbjct: 324 VGLVAGYISPIGLKKNKDFDIIVDKTVMEMKDACCGANIKDKHYIHVNPKRDFNSVRIET 383

Query: 310 I-----------LGFPVMNEKQKPVVFGSVGGGG-------RYDGLVSRFKGQNVPATGF 351
           I            G  +  +K   V      G          Y     + K   +   G 
Sbjct: 384 IRLIDKNDVSPWTGKEIEFKKGIEVGQVFKLGTKYSESLNCTYLDKNGKSKPMVMGCYGI 443

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML-RTAGI--RAE 408
            +  +      ++ +                +   ++  S+     + L R         
Sbjct: 444 GVTRTMAASIEQNHDKDGIIWAVSIAPYEVVIIPANNKNSEVMKVAEELYRNMSKENNEI 503

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +F   ++  G + K AD    P+ +  G      G ++IK    G+ +  + K+ ++  E
Sbjct: 504 VFDDRNERAGIKFKDADLIGYPIRVTIGKKWEENGKVEIKIRRTGEVIEIDYKDCKAKVE 563

Query: 469 A 469
           +
Sbjct: 564 S 564


>gi|193211793|ref|YP_001997746.1| threonyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085270|gb|ACF10546.1| threonyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 661

 Score = 73.7 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D     +     L  AGIRAE+ L S K  G +++ A+    P  +
Sbjct: 561 WLAPVQVAVLPIAEDVHDYAREVYAKLHAAGIRAELDLRSEK-IGKKIREAEVSKIPAML 619

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           I G  E+ +G + ++   KG E S  +    +     + Q +
Sbjct: 620 IIGRNEQEKGEVSLRRHRKGDEGSFGVDELIARLREEIDQRS 661



 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 77/269 (28%), Gaps = 12/269 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+  G          IRN +   ++      G+ P+ TP +   +   +        
Sbjct: 270 LTPEVGSGLPIWLPNGAIIRNELETFLKAEQRKRGYVPVYTPHIGNIELYKRSGHYPYYS 329

Query: 67  NKGV--FSLQDDDGQW--ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +      + +D+ G+     L+             +        R+YR  P+   E    
Sbjct: 330 DSQFPPLTYKDETGREEQYLLKPMNCP-------HHHLIYSQTLRSYRDLPIRLTEFGTV 382

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            R  Q  + +   V +   T D        D L        D    + N    D +  ++
Sbjct: 383 YRHEQSGELN-GLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTRFVFNTLGFDDVETRL 441

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            LH  +  ++        ++ +K   +    +  +           G  +     D +  
Sbjct: 442 SLHDPENQSKYGGTAEVWEQAEKDVKEAADRMGIKYFIGIGEASFYGPKIDFIVRDAIGR 501

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNE 271
              +   +  + + E    +  G  G   
Sbjct: 502 KWQLGTVQVDYVMPERFDLSYIGSDGQKH 530


>gi|152991367|ref|YP_001357089.1| ATP phosphoribosyltransferase regulatory subunit [Nitratiruptor sp.
           SB155-2]
 gi|151423228|dbj|BAF70732.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 282

 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 77/225 (34%), Gaps = 12/225 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E+P+G      +  +I+  I      I    GF+ I TPL  Y     KF+ DE    K 
Sbjct: 6   EIPKGARLYFGQTAKIKRDIEKIASEILYEEGFEEIATPLFSYHQ--HKFIADE----KV 59

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  L DD  + +SLR D T  + R +           + + I PV+R         ++F 
Sbjct: 60  LIRLSDDKNRELSLRADSTIDVVRLITNRLGRSTEHKKWFYIQPVYRYPT------QEFH 113

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   + + S    A  ++ +     L+     +              GI  +   +GD  
Sbjct: 114 QIGAEVLESKDVAAILKILIKFFHRLQITPNLQISNIKIPEILAQNYGIGYEELKNGDIN 173

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
              +         L    ++ +    GE   +   +  K   L  
Sbjct: 174 TILQTQHPWVEKLLYIQTVEEIDECFGEVPEEIEQELLKMKELAL 218


>gi|190347757|gb|EDK40092.2| hypothetical protein PGUG_04190 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1613

 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 67/440 (15%), Positives = 126/440 (28%), Gaps = 48/440 (10%)

Query: 15   FADCPTKEIRIRNRILDSIRNIYENYGFDP-----IETPLLEYSDSLGKFLPDEDRPNKG 69
              D       + + ++D++  I+  +G        I  P    S +L             
Sbjct: 1002 TRDYL-----LFSNMIDTLFGIFRLHGAIEDYSSDILLP---KSQNLSAG---------Q 1044

Query: 70   VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGRFRQ 127
            V+ + D  G  +SL YDL  P AR+++ N   I             +             
Sbjct: 1045 VYDVLDRSGTVLSLPYDLILPKARFLSRNNIDIAKLYCHEFVYRPNIRGPGTPDKYSSVN 1104

Query: 128  FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
            F     D        A+     ++ + L      +      +      D I   I     
Sbjct: 1105 FDITTHDRSLLPINDAEC--LKVVDEILHHFPCFKAKGSQCLILINHSDIINSVITFAFG 1162

Query: 188  DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +           I  L + G++     +     ++            +  + M      D
Sbjct: 1163 NIGISDRKRHEVIGVLSQLGIEKSPEEIKRYLREDFNVPHTVTRDLVDTFNFMGE--PDD 1220

Query: 248  LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
              + + +        +  EK    ++ +  ++RK G  S       +      Y  G ++
Sbjct: 1221 ARRKLKKAMVDSPYFVKVEKALVYIMDVLSILRKFGVKSGVYLSPLSNYNCQYYTGGIMF 1280

Query: 308  EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN------VPATGFSIGISRLIVA 361
            +AI              F  V  GGRYD LVS     +        A G S+  + L + 
Sbjct: 1281 QAIFRLDTKRR------FARVLTGGRYDKLVSSLANVDINKAITPHAVGLSLTSTFLFLL 1334

Query: 362  LKSL-----ESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSK 415
            LKS      E  +          +     +   +        Q L    I  +    +S+
Sbjct: 1335 LKSRKIGPNEKYSETQWRGTRCDVLITSTNKSLVRLAGFEIAQSLWKNRISCDFAYSASQ 1394

Query: 416  NFGNQLKYADRRNCPLAIIQ 435
               + +  A +  C   +  
Sbjct: 1395 T--DIMDQAAQDGCGWIVFI 1412


>gi|170039797|ref|XP_001847709.1| eukaryotic translation initiation factor 2-alpha kinase 1 [Culex
            quinquefasciatus]
 gi|167863388|gb|EDS26771.1| eukaryotic translation initiation factor 2-alpha kinase 1 [Culex
            quinquefasciatus]
          Length = 1525

 Score = 73.7 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 84/497 (16%), Positives = 161/497 (32%), Gaps = 71/497 (14%)

Query: 7    LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            +   +PR             + I   I +++  +G   + TPLL       +    E+  
Sbjct: 920  MVPIIPR------------FDFIKAKIIDLFRKHGAIEVVTPLLTPC---TRTSTRENSV 964

Query: 67   NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                  L    G  +SL  DL  P  R+VA      V   R Y IG V+R +K      +
Sbjct: 965  -----KLMTHSGSIVSLPEDLRLPFLRHVA---LNGVRFIRRYSIGRVYREKKVFNFHPK 1016

Query: 127  QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
            Q  +C  D V         +  ++         +   D    +  R     +L+ I L+ 
Sbjct: 1017 QVYECAFDIVTPCRGNMVVDAELIAIANDILRELNLLDQKRNVYFRLNHTSLLKSILLY- 1075

Query: 187  DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR---TDNSGDFTKGANLTSEQIDIMVSF 243
                    + L    +L +  L+ ++  + + +   + NS     G  + +  +  ++  
Sbjct: 1076 ------CNVPLEKYKELFEIVLEYLENKISKFQLVGSVNSQISQPGVKINTGYLCDILQI 1129

Query: 244  LSIDLEKSMHELYELVKG----TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
              I LE+    L EL KG     +  +    +L  +  L +  G    +  +       +
Sbjct: 1130 PEISLEQLKGTLKELFKGRGEAAMLAKMAQRDLESVVSLAQGMG---VQCPMMVCPGLPI 1186

Query: 300  EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ------NVPATGFSI 353
             Y        +       + +K     ++  GGRYD  +  F+         VP    S 
Sbjct: 1187 NYERAKGGGLVWQLLGELKPKKRNPITTIAVGGRYDAKLVDFQKSGIENGLQVPKVELSG 1246

Query: 354  GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                  +        +    +   V+I  +        +     + L + GI+  + L  
Sbjct: 1247 AGFSFHLDKLVHAIGSIRGCDPIEVMIYIIGSRP-PTKEVVSILRPLWSHGIKTGI-LEG 1304

Query: 414  SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              +       A      L ++ G G    G L+++                +W   R  +
Sbjct: 1305 VISVE---DSAKEVGANLVVMLGEG----GELRVR----------------TWDHDRFQE 1341

Query: 474  ITIPISELVSTVKKILQ 490
              +   EL+S + K L+
Sbjct: 1342 RHVTRPELISYILKTLR 1358


>gi|198450350|ref|XP_001357945.2| GA14045 [Drosophila pseudoobscura pseudoobscura]
 gi|198130998|gb|EAL27081.2| GA14045 [Drosophila pseudoobscura pseudoobscura]
          Length = 1593

 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 61/483 (12%), Positives = 125/483 (25%), Gaps = 52/483 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL    S  +        N     L    G  + L 
Sbjct: 974  VFEFVKAKVVNLFRKHGAIEVDSPLLSPLSS--RNCSASANANA--VHLMTHSGCVVVLP 1029

Query: 85   YDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N   ++               N          F            + 
Sbjct: 1030 CDLRTQFARHVTMNGVNLIRRYCVDRVYREERVFNFHPKQNYECSFDIITPSAGSHLVDA 1089

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID- 201
                +   +   L  +  +  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1090 ELLSLAFEITSELPRL--RERNLAIRMNHTNLLRAILIFCNVPKSQYSALFEGTMDFIES 1147

Query: 202  ---KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
               +        V +           D      L +     +       L +   E   L
Sbjct: 1148 RISRFQFHSSITVIMEKSRTSAQTLMDMLLANFLLTGSRSSVEESALKSLMRGKGEAASL 1207

Query: 259  VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
             +G +   +   EL                  I       + +        +       +
Sbjct: 1208 ARGALRELENVVELAYSL---------GVTCPIQIWAGLPISFERASSGGIVWQMTADLK 1258

Query: 319  KQKPVVFGSVGGGGRYDGLVSRFKG---------QNVPATGFSIGISRLIVALKSLESST 369
              +      +  G RYD ++  F+                  +     L   + ++    
Sbjct: 1259 PNRSGNPSVLAVGERYDAMLHEFQRQAQSYNQTLPPRGVLSGAGLSFSLDKLVAAVGVEY 1318

Query: 370  NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                    V I         L       ++L + GIR  +   +S         A R   
Sbjct: 1319 AKDCRAIDVGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIVETASGAGDEAQDLA-RLGA 1376

Query: 430  PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
               I+        G L+++                S+   R  +  +  +ELV  ++K+L
Sbjct: 1377 LHVILVAE----NGSLRVR----------------SFERERFQERHVNRAELVDFIQKLL 1416

Query: 490  QEN 492
            +  
Sbjct: 1417 RAE 1419


>gi|307942137|ref|ZP_07657488.1| prolyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307774423|gb|EFO33633.1| prolyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 443

 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 49/447 (10%), Positives = 119/447 (26%), Gaps = 62/447 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +       G   +  P ++ ++ L +     D   K +  +
Sbjct: 38  GIYSWLPMGHRVLRKIERIVEEEQNRAGAVQLLMPTIQSAE-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D   + I       ++   + R    ++  +      Y I   FR+E        +  +
Sbjct: 97  TDRHERDILFGPTNEEMITDIFRGYVRSYKDLP--LNLYHIQWKFRDEVRPRFGVMRGRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S     ++ +       +  +   +         R  L  I            
Sbjct: 155 FLMKDAYSFDLDKESAVESYNRMFVAYLRTYK---------RMGLTAI------------ 193

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               +K   G    D S +F   A+    ++     +L+     
Sbjct: 194 -------------------PMKAETGPIGGDLSHEFIVLADTGESEVYCHADYLTKQTPG 234

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                   +          +      ++V K+ + +   +    + RG+E      +   
Sbjct: 235 EDVNFDGDL--NPIVNDWTSHYAATEDVVDKAAFEAKVPEDKRIVARGIEVGQTFYFGTK 292

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              P           G+   G   DG        +       +  + +  +        +
Sbjct: 293 YSEP----------MGAKVAGS--DGKEVPVHMGSYGVGVSRLLGALIEASHDDAGIIWH 340

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                  V +  +    ++              AG+        ++  G +    D    
Sbjct: 341 KSVAPFHVGLINLKPGDETTDAACEDLYAKFEAAGVEVLYDDTDNRA-GAKFASMDLIGL 399

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKEL 456
           P  ++ G      G+L++K+ A G++ 
Sbjct: 400 PYQVVAGPRGLKDGVLEVKNRATGEKE 426


>gi|319935959|ref|ZP_08010383.1| ATP phosphoribosyltransferase regulatory subunit [Coprobacillus sp.
           29_1]
 gi|319809073|gb|EFW05569.1| ATP phosphoribosyltransferase regulatory subunit [Coprobacillus sp.
           29_1]
          Length = 322

 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 68/342 (19%), Positives = 132/342 (38%), Gaps = 45/342 (13%)

Query: 27  NRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYD 86
            +I + +R ++  + +  +  P  EY D       D     + +F   + +G+ ++LR D
Sbjct: 24  RKIENDLRRVFVEHDYLEVLMPSFEYVDLYNAL--DSGIEEEKMFQYINFEGKRVALRTD 81

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
            T PLAR  +      +   R    G V+R EK   GR  +F Q  ++ +G +    D E
Sbjct: 82  FTIPLARLYSS--QKEIGVKRYCYFGNVYRKEKRHKGRSSEFFQAGIELLGQAGFAGDIE 139

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
              ++ +TL  +G+K                 +E        +L E +     +D L K 
Sbjct: 140 CLHIIQETLSYLGLKDIK--------------IEMSSAKFYKRLCELVDDTSFVDILKKR 185

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
            L  +K+L+                + S   D+++       + +M     ++      +
Sbjct: 186 DLSSMKILIDRK------------GIQSPLKDLLIQLPRCFGDIAMLNQMIMMIQDQQLK 233

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
               EL  + + + K  + S  + ++ ++                   ++ +   P    
Sbjct: 234 DALLELRDLYDKLEKKEFFSFDLAMTPSMKYYTG--------------IIIKGYSPYSAD 279

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           ++  GGRYD L+  F    VPA GFS  +S ++ AL+  E +
Sbjct: 280 TIINGGRYDKLMDHFHKV-VPAIGFSYDLSHILKALEKEEEN 320


>gi|118474511|ref|YP_891571.1| ATP phosphoribosyltransferase regulatory subunit [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118413737|gb|ABK82157.1| tRNA synthetase, class II [Campylobacter fetus subsp. fetus 82-40]
          Length = 283

 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 10/126 (7%)

Query: 1   MGKKTKLRAE--LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M    K+  E  +P G         +++  I +    I E YGF  I TP   Y   L  
Sbjct: 1   MNYTNKIIYEHEIPDGSKLYFGNSAKLKRDIENRASVILEKYGFSEIITPYFSYHQHLS- 59

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
                    + +    D     ISLR D T  + R +A      +   + + I PVF+  
Sbjct: 60  ------VAPQKLLRFSDSTNHEISLRADSTVDVVR-IATKRLKDMSTKKWFYIQPVFKYP 112

Query: 119 KHGPGR 124
                +
Sbjct: 113 SSEIYQ 118


>gi|242398481|ref|YP_002993905.1| Threonyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|259516775|sp|C6A1R1|SYT_THESM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|242264874|gb|ACS89556.1| Threonyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 625

 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/226 (10%), Positives = 64/226 (28%), Gaps = 12/226 (5%)

Query: 260 KGTIAGEKGFNEL--VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP--- 314
           +      +   +        +V  +G     + I     R   +     +  +       
Sbjct: 382 EDYEVAIRFTEDFWNENKDFIVDLAGIIGKPVLIEMWKQRFFYFILKFEFNFVDNLDKAA 441

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL------ESS 368
            ++  Q  V      G   YD          +  +        +   L+           
Sbjct: 442 ALSTVQIDVENSQRFGITYYDEEGQEKYPLLLHCSPSGAIERVMYAILEKQAKIMKKGKK 501

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                 + P+ +  +      L         L  A IRA++   + +    +++ A++  
Sbjct: 502 PMYPLWLSPIQVRIIPVSEKYLDYALYIAGKLEGAKIRADVDDRNER-LNKKIREAEKEW 560

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            P  I+ G  E+  G++ ++     K+   ++++       +    
Sbjct: 561 IPYIIVVGENEKRMGVITVRKREDNKQYEIQVEDLIKEIRQKTEGF 606


>gi|320590310|gb|EFX02753.1| protein kinase [Grosmannia clavigera kw1407]
          Length = 1708

 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 68/449 (15%), Positives = 142/449 (31%), Gaps = 47/449 (10%)

Query: 21   KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
            +++  +  + + + +++  +G        L    SL  +          V  L D +G  
Sbjct: 1078 QDLMRQYTVKEMLVSVFRRHGAVETTRSSLYPMSSL--YGG------ANVVQLLDRNGNL 1129

Query: 81   ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            + L +DLT   AR +A    T                E+ G G+   F + D D V +  
Sbjct: 1130 LQLPFDLTMGNARALA-RCITGGDVVAKSYTFGSIFRERAGGGQPSMFGEVDFDLVTTHT 1188

Query: 141  ET---ADAEMCMMMADTLEAVGIKRNDY-HIGINNRKILDGILEKIGLHGDDKLNERLIV 196
                  +AE+  ++ +   A    RN      + +  +L  I +  G+    +     ++
Sbjct: 1189 LDLALREAEVIKVIDEITVAFPTLRNSPLCFQLGHSDLLKLIFDFCGVDKKARRAVADVL 1248

Query: 197  LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHEL 255
             R    +       +++ L           +     ++  ID +  F   D   K+  +L
Sbjct: 1249 SRL--NIHGMTWAKLRVELR----------SPLVGASTTSIDELQKFDFRDTPSKAFSKL 1296

Query: 256  YELVKGTIAGEKGF---NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
              L  GT + E+       +  + E  ++ G  +              +  G ++  +L 
Sbjct: 1297 KTLFVGTDSYERASSTLAHMREVHEYCKRLGVTNKMYVCPLNTWNEAFFSGGIMFSCLLD 1356

Query: 313  FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL---------- 362
              V +       +  +     Y             A GFS+   +L  A           
Sbjct: 1357 KKVKDVFAAGGRYDGLI--KEYRPRFGSNIPDERHAVGFSLNWEKLAQAPPRSSGKAFLK 1414

Query: 363  KSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
            ++ E   N         +     D     S      + L   GI AE+  G +++    +
Sbjct: 1415 RAAEEEANGAFSAKRCDVLVASFDPTILRSVGVELVRTLWAHGISAELA-GDARSTEELV 1473

Query: 422  KYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                        I     +  G+++I+ +
Sbjct: 1474 SKNRDEGHAWIAIV----KQDGVVKIRTM 1498


>gi|78776275|ref|YP_392590.1| ATP phosphoribosyltransferase regulatory subunit [Sulfurimonas
           denitrificans DSM 1251]
 gi|78496815|gb|ABB43355.1| tRNA synthetase, class II (G, H, P and S) [Sulfurimonas
           denitrificans DSM 1251]
          Length = 282

 Score = 73.3 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 19/214 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+P G         +I+  I     +I  + GF+ I TP+  Y              
Sbjct: 3   LEHEIPSGSKLYFGNSAKIKREIEKVASDILYSRGFEEIVTPIFSYHQ------HKSIAN 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  + D+    ISLR D T  + R + +         + + I PVFR       +  
Sbjct: 57  EKELIKVNDEKNNSISLRADSTIDVVRIIEKRLGRNTEHKKWFYIQPVFRYPTDEQFQIG 116

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                +              +  +  +    + +        +   K+L  + + + L  
Sbjct: 117 VEFMGESKLSS---------VLNIAIEIFNTLEVYPLIQISNMMIPKLLVEMFDDLTLDD 167

Query: 187 DDKLNERLIVLRAIDKL----DKFGLQGVKLLLG 216
              +N    + + +D L         + V  LL 
Sbjct: 168 FRHVNIEKFLAQRVDWLEKLVYLQHPEQVDKLLE 201


>gi|13235453|emb|CAC33746.1| Histidyl-tRNA synthetase [Rickettsia typhi]
          Length = 251

 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 89/256 (34%), Gaps = 26/256 (10%)

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT--IAGEKGFNEL 272
           L E   D     +  + +   +  + +     ++++ +     ++        +K F+EL
Sbjct: 20  LVEYLNDFKDKLSGESKIRLNKNPMRILDSKSEIDQKIIANAPILSDYHTNESKKYFDEL 79

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
           +   +++        +  I+  +VRGL+YY   V+E            K     ++  GG
Sbjct: 80  LKYLDIL------GIKYSINPRLVRGLDYYCHTVFEFTTQ--------KLGSQATILAGG 125

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           RYD L       +V A GF+ GI R+ +                   +  +    +++  
Sbjct: 126 RYDMLSRIMGNYDVHAIGFAAGIERIAL--------MKKYNIFVIKPVFVLPIGKNNICY 177

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  LR   I + +          +++     +    I  G  E+    L+ KDL  
Sbjct: 178 ALDIVDKLRLHNIISIIDPIG--KIAKRIQRVLNEDAKFIIFVGDEEKMNNNLKFKDLKN 235

Query: 453 GKELSREIKNNESWRE 468
            KE   +++      +
Sbjct: 236 QKEYIIDLEKVLELLK 251


>gi|255065704|ref|ZP_05317559.1| proline--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255050022|gb|EET45486.1| proline--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 570

 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 70/568 (12%), Positives = 154/568 (27%), Gaps = 100/568 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +   ++     +   + 
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLGLEFRPVAADTGSIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       +  K      + 
Sbjct: 204 GTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAA-AQAELAKVHTPNVKT 262

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           ID +V FLSI +EK++                     HE  ++    +AG K    +   
Sbjct: 263 IDSLVDFLSIPIEKTLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMADP 322

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +  + G N   +       +   ++ T    + ++G    +       FG       +
Sbjct: 323 AAIRAQFGANGGSLGPVGFTGKVYADFATEKGVDWVIGANEDDYHYTGFNFGRDAAEPEF 382

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 383 VDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEMGCY 442

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M P  +  +  +                 L  AG
Sbjct: 443 GIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVRDAADKIYAELLAAG 502

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
               +     +  G  L  ++    P  I+ G      G +                   
Sbjct: 503 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNV------------------- 542

Query: 465 SWREARVAQ-ITIPISELVSTVKKILQE 491
            + E R  Q  T+ ++E+   V   L++
Sbjct: 543 EYAERRDNQAQTVSLNEIAGKVLAALKD 570


>gi|49475642|ref|YP_033683.1| prolyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81827712|sp|Q6G3A4|SYP_BARHE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49238449|emb|CAF27677.1| Prolyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 441

 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 62/472 (13%), Positives = 124/472 (26%), Gaps = 72/472 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G         ++ ++I   IR   E  G   I  P ++ +D L +  
Sbjct: 26  MLRAGMIRQQT-SGIYSWLPLGKKVLDKICKIIREEQERAGAIEILMPTIQSAD-LWRES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP---- 113
              D     +  ++D   + +       ++   + R    ++  +       +       
Sbjct: 84  DRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRSYIRSYKDLPLNLYHIQWKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR- 172
             R        F        D     ++ +   M +    T   +G+K            
Sbjct: 144 RPRFGVMRSREFLMKDAYSFDLDYEGSKISYNRMFVAYLRTFSCLGLKAIPMRADTGPIG 203

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
             L      +   G+  +      L                       D+S DF+  A L
Sbjct: 204 GKLSHEFIILAETGESAIFCDKHFLELT------------------VPDSSIDFSDKAIL 245

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
                                    +VK   +      E+    E  + S  N       
Sbjct: 246 -----------------------ANIVKQWTSFYAATEEMHDEEEWAKISDNN------- 275

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
               RG+E      +      P+  +                DG        +       
Sbjct: 276 RLSARGIEVGHIFHFGTKYSAPMGAKVMGQ------------DGKEHLVSMGSYGIGPSR 323

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFL 411
           +  + +  +                  I  M  D +  +       + LR AG    +  
Sbjct: 324 LVAAVIEASHDENGIIWPKSIAPFDFGIINMKPDDEKCTHACETLYKGLRYAGFDPLLDD 383

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            + +  G++    D    P  II G    ++  ++IKD   G + S  ++N 
Sbjct: 384 RNER-PGSKFATMDLIGLPTQIIVGPKSVAQNEVEIKDRKTGIKKSLTVENV 434


>gi|251772092|gb|EES52662.1| prolyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 429

 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D      R+  R+   +R   +  G   I  P L+ ++ + +     ++  K +F L
Sbjct: 38  GLYDFLPFGARVLRRVERIVREEMDRAGAFEILMPALQPAE-MWEKTGRWEKYGKELFRL 96

Query: 74  QDDDGQWISLRY 85
            D   +  +L  
Sbjct: 97  TDRHDRSFALGP 108



 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 32/105 (30%), Gaps = 4/105 (3%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN--QLKYA 424
                +      ++     D++   K      +L       E+ L   ++     +   A
Sbjct: 312 IWPTAMAPFAVAVLPLGGRDAELSEKALRIAGLLEER-FPEEV-LVDDRDLRAGVKFADA 369

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           D    P+ +I G         +IK  + G+  + ++     W   
Sbjct: 370 DLCGFPIQVILGEKGLRENRAEIKVRSSGERNTVDLSALSEWIAD 414


>gi|284008500|emb|CBA75007.1| prolyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 571

 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  D     +R+  ++ + IR      G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYDWLPTGVRVLRKVENIIREEMNRAGAIEISMPIVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 42.5 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +   + L+  GI   +     +  G  
Sbjct: 461 DDKGIIWPDAIAPFQVAILPMNMHKSYRVKEVAERLYRDLQAKGIDVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K     ++    I     +   ++ 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNNQVEYKQRRNNEKEYINIAGIVDFLHTKLN 571


>gi|228478293|ref|ZP_04062901.1| threonyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228249972|gb|EEK09242.1| threonyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 648

 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 54/475 (11%), Positives = 120/475 (25%), Gaps = 96/475 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRVLERYIVDKEVAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V+++  H        I   
Sbjct: 321 MDMGDGEAFVLRPMNCP--------------------HHIEVYKHHVHSYRELPIRIAEI 360

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A   +  +   +L           I    ++ L  I   I ++ D  L +
Sbjct: 361 GMMHRYEKSGALTGLQRVREMSLNDGHTFVTPEQIKDEFQRTLQLI---IDVYEDFNLTD 417

Query: 193 RLIVLRAIDKLDKF-------GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               L   D  D           +  + +L     D   D+ +     +     +     
Sbjct: 418 YRFRLSYRDPKDTHKYFDNDEMWENAQSMLKSAMDDMELDYFEAEGEAAFYGPKLD---- 473

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                   ++   +           + ++  E        ++  +    ++      T  
Sbjct: 474 -------IQVKTALGNEETLSTIQLDFLLP-ERFDLKYIGADGEEHRPVMIHRGVISTME 525

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            + AIL                      Y G    +                  +A + +
Sbjct: 526 RFTAILI-------------------ENYKGAFPTW------------------LAPQQV 548

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                + +                        + LR  GIR E+    ++    +++ + 
Sbjct: 549 TVIPVSNEAHTDYAWEV--------------AKQLRDRGIRVEVD-ERNEKMQYKIRASQ 593

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            +  P  +I G  E   G + ++   + +  +  +        A +A+ + P +E
Sbjct: 594 TQKIPYQLIVGDKEMEDGTVNVRRYGQKQTHTEAVSEFVENILADIARKSRPDAE 648


>gi|195449884|ref|XP_002072268.1| GK22763 [Drosophila willistoni]
 gi|194168353|gb|EDW83254.1| GK22763 [Drosophila willistoni]
          Length = 1607

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 70/480 (14%), Positives = 128/480 (26%), Gaps = 49/480 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   ++TPLL       +     +  N     L    G  + L 
Sbjct: 994  VIEFVKAKVVNLFRKHGAIEVDTPLLSPLS--ARNSAASENSNA--VHLMTHSGCVVVLP 1049

Query: 85   YDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  +   ++               N          F            + 
Sbjct: 1050 CDLRTEFARHVIHHGVNLIRRYCVDRVYREEKVFNFHPKQNYECYFDIITPTTGSHLVDA 1109

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   + + L  +  K  +  I IN+  +L  IL    +            +  I+ 
Sbjct: 1110 ELLSLAFEITNELPRLREK--NIAIRINHTNLLKAILIFCNVPKSQYNALFDATMDFIET 1167

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      +     ++  S        L +  +    S +     K++          
Sbjct: 1168 RTSRFQFHSCIAGIMEKSRTSAQSLMDMLLVNFLLTGSRSSVDDTALKTLMRGKGEAASL 1227

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G     EL  +  L    G        S   +R      G +   +      N    P
Sbjct: 1228 ARG--ALRELETVVGLAYSLGVTCPINIWSGLPIRFDRASNGGIVWQMTADLRPNRSGHP 1285

Query: 323  VVFGSVGGGGRYDGLVSRFKG---------QNVPATGFSIGISRLIVALKSLESSTNNIK 373
                 +  G RYD ++  F+                  +     L   + ++        
Sbjct: 1286 ---SVLAEGERYDTMLHEFQKGAQGFNSTLPTRGVLSGAGLSFSLDKLVAAVGVEYAKDC 1342

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR---AEMFLGSSKNFGNQLKYADRRNCP 430
                V I         L       + L   GIR    E   G   +   Q   A R    
Sbjct: 1343 RAIDVGICVCGTRP-PLKDVTYIMRRLWAVGIRCGIVETGCGEGGD-EAQ-DLA-RLGAL 1398

Query: 431  LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
              I+        G L+++                S+   R  +  + I+ELV  + KIL+
Sbjct: 1399 HVILVAE----NGSLRVR----------------SFDRDRFQERHVTIAELVEFIPKILR 1438


>gi|296116519|ref|ZP_06835129.1| prolyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295976731|gb|EFG83499.1| prolyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 439

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/448 (10%), Positives = 106/448 (23%), Gaps = 56/448 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++   I + +R   +  G   +  P L+ S+ L K     D     +  +
Sbjct: 38  GIYAWLPAGLKVLRNIANIVRAEQDAIGAQEMLMPTLQSSE-LWKRSGRYDAYGPEMLRI 96

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +D   + +                                             + +    
Sbjct: 97  RDRHERDL--------------------------------------LYGPTNEEMVTDLF 118

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             V  S       +  +     + V  +           K             D      
Sbjct: 119 GQVVKSYRELPQVLYHVQWKFRDEVRPRFGVMRGREFYMKDAYSFDADYDAAVDSYRRMM 178

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  LR   +L    +  V    G    + S +F   A               +  + +  
Sbjct: 179 LAYLRTFQRLGVKAIPMVAD-TGPIGGELSHEFLVLAPTGES---------GVFFDGAFE 228

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E   L +     ++    L      +      ++     +   +             +G 
Sbjct: 229 EQDWLSEEVDIADRAS--LAKFFARMTSFYAATDEKHDEAQWAKVPVERRREGRGIEVGH 286

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                ++               G         + + G  +      +   S +       
Sbjct: 287 IFHFGRKYTESMDISV-----SGPDGAPLFPEMGSYGIGVSRLVAAIIEASHDEQGIIWP 341

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           E        + +  +  ++     + L  A     ++    +  G +   AD    P  +
Sbjct: 342 ETVAPFGAVIINLKNGDAQCDEICERLYAAAPDRLLYDDRPERAGVKFADADLMGHPWQV 401

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           I G      G++++K+ A G+     I 
Sbjct: 402 IVGPRGAKAGVVELKNRASGERSELPID 429


>gi|170016922|ref|YP_001727841.1| threonyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688955|sp|B1MXZ5|SYT_LEUCK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169803779|gb|ACA82397.1| Threonyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 653

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/471 (12%), Positives = 121/471 (25%), Gaps = 85/471 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G          IR ++   I +     G+  + TP+L   +   K     D   + +F 
Sbjct: 265 SGLPVWLPNGATIRRQVERYIIDKELANGYQHVYTPVLSNLNLY-KTSGHWDHYREDMFP 323

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+++ LR                        +   P    E          +  
Sbjct: 324 PMDMGEGEFLELRP--------------MNCPSHIMVFNHKPRSYRELPIRIAELGMMH- 368

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A   +  +   TL           +    + IL  ++   G++ D  + 
Sbjct: 369 -----RYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMM---GVYRDFNIT 420

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D               +   D+       A L     D+ + +   + E +
Sbjct: 421 DYRFRLSYRDP----------ENTEKYFDDDDMWEKSQAQLKRAMDDLKLDYYEAEGEAA 470

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    +N   I                +   + 
Sbjct: 471 FYGPKLDVQTKTALGSEETMSTIQLDFLLPERFNLTYIGADGQDNHRPVMLHRGIVGTME 530

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 531 RFTAYLIEMYKGAFPTWL------------------------------------------ 548

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  ++  +            L+ AG+RA +    +K  G  ++ A     P 
Sbjct: 549 --SPLQVQIIPVNLGAHG-DYANDIQAQLQAAGLRAHVETKDAK-MGYLIREAQTNKIPY 604

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSR--EIKNNESWREARVAQITIPISE 480
            ++ G  E     + ++    G+E +R     + +S   A VA  + P+++
Sbjct: 605 TLVLGDSEVDGQTVTVR--KYGEEKTRTMRFADFQSEILADVANYSRPVND 653


>gi|113869200|ref|YP_727689.1| prolyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123133602|sp|Q0K6Q0|SYP_RALEH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113527976|emb|CAJ94321.1| Prolyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 573

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/563 (10%), Positives = 134/563 (23%), Gaps = 100/563 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++ + +R      G   +  P+++ ++ L +     D+ 
Sbjct: 31  MIKKLGAGIYNYMPIGLRVIRKVENIVREEMNRAGAVELSMPVIQPAE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  L+D   +  +++    ++   +AR    ++  +       +             
Sbjct: 90  GPELLRLKDRHERDFAVQPTSEEVVTDIARSEIRSYKQLPVNFYQIQTKFRDERRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK------------RNDYHI 167
                F        D        +   M           G++             +  H 
Sbjct: 150 MRGREFTMKDAYSFDRDTDGLRKSYENMYDAYVRIFRRFGLEFRAVAADNGAIGGSGSHE 209

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
                   +  +            E    L  +          VK    E          
Sbjct: 210 FHVIADTGEDAIVYCPTSDYAANMEAAEALPLLASRAAPAEDLVKTATPEKAKCEHVAEF 269

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSM------HELYELVKGTIAGEKGFNELVVISELVRK 281
            G  L      I+++  +    +              VK +             +E+V  
Sbjct: 270 LGIPLQRTVKSIVLAKDTEAGAEIWLLLIRGDHELNEVKASKVPGLADFRFATENEIVDA 329

Query: 282 SGYNSNRI---------------------KISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
            G     +                                +YTG  +   L  PV+ + +
Sbjct: 330 FGSPPGYLGPIGAKKPVKVVADRTVANMSDFVCGANYRDYHYTGVNWGRDLPEPVVADLR 389

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
             V   +   G     +    +  +V   G     S     L     +         + +
Sbjct: 390 NVVAGDASPDGQGTLEICRGIEVGHVFMLGTRYSESMNATFLDENGKTQPMQMGCYGIGV 449

Query: 381 TTM--------------------------------DHDSDSLSKYQMYTQMLRTAGIRAE 408
           T +                                D      ++       L  AG+   
Sbjct: 450 TRILGAAIEQNFDERGIIWPAAIAPFAVVICPVGYDRSEAVKAEADRIHAELLAAGVDVI 509

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +     +  G      +    P  ++ G      G +                    ++ 
Sbjct: 510 LD-DRGERPGVMFADWELIGVPHRVVVGDRGLKEGKV-------------------EYQG 549

Query: 469 ARVAQIT-IPISELVSTVKKILQ 490
            R AQ T + ++++V  V+  L 
Sbjct: 550 RRDAQATAVSVADVVGHVRSQLA 572


>gi|310827810|ref|YP_003960167.1| threonyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308739544|gb|ADO37204.1| threonyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 637

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 1/106 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  +     L  AGIR E+     +  G +++ A  +  P  +
Sbjct: 533 WLAPVQVQLIPVSDAHDAFTKEIAAKLEEAGIRVEIDF-RDEKIGYRIREAQMQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           + G  E   G L I++   G++ + +I   +      +AQ ++ + 
Sbjct: 592 VIGDKEVESGRLSIRNRDTGEQETLKIDEFKYRLAQNIAQKSLVLD 637



 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R+ +   G+  I+TP++  +D L +     D   + ++  
Sbjct: 260 GFPFFHPKGMVLRNELENFWRSEHMKKGYKEIKTPIMLNAD-LWRRSGHWDNYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
            + DGQ  +++      
Sbjct: 318 TEIDGQEFAVKPMNCPG 334


>gi|299535482|ref|ZP_07048804.1| threonyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|298729243|gb|EFI69796.1| threonyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
          Length = 643

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/458 (12%), Positives = 117/458 (25%), Gaps = 81/458 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+  + TP+L   +         D     +F  
Sbjct: 265 GLPLWLPNGATIRRVIERYIVDKELSLGYKHVYTPVLGSKELYQTS-GHWDHYQDSIFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + +R             +         +YR  P+   E               
Sbjct: 324 MEMDNETLIMRPMNCP-------HHMMVYKNSMHSYRNLPLRIAEL-------------G 363

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A + +  +   TL    I      I    +K++  ILE      D  L++ 
Sbjct: 364 TMHRYEMSGAVSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLILEVYK---DFDLHDY 420

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L   D                                             D EK   
Sbjct: 421 SFRLSYRDP-------------------------------------------ADTEKYFD 437

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +     K     ++  +EL    +     G  +         V+        +    L F
Sbjct: 438 DDAMWEKAQSMLKEAMDEL--GLDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDF 495

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +        V          DG   R    +            +   ++  + +     
Sbjct: 496 LLPERFDLTYVGE--------DGKPHRPVVIHRGVVSTM--ERFVAFLIEEYKGAFPTWL 545

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  + +++      +   + L  AG+R EM     K  G +++ A  +  P  +
Sbjct: 546 APVQVEVIPVSNEA-HFDYAKQIEEQLTAAGLRVEMDDREEK-LGYKIREAQMKKIPYML 603

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           + G  E     + ++        +   ++  S  +  +
Sbjct: 604 VIGDKEVEANGVNVRRYGSKDSETISFEDFLSTIKTEI 641


>gi|325182075|emb|CCA16528.1| eukaryotic translation initiation factor 2alpha kinase putative
            [Albugo laibachii Nc14]
          Length = 1434

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 74/498 (14%), Positives = 158/498 (31%), Gaps = 65/498 (13%)

Query: 18   CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
               +E R +  I ++++ I+E +G     TPLL     L  +       +K   +  D +
Sbjct: 744  YFHREQRAKTLIQNTLQRIFERHGAMEHTTPLLMPKGPLLNYTGIPLESSKASANFIDGN 803

Query: 78   GQWISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDN 135
            G  + L +DLT   AR+VA +    +   +        V              I  D  +
Sbjct: 804  GLPVMLPFDLTERYARFVARHNLVRMKSFQFARVYRKNVSSGHPRELLEAAFDIIWDEKS 863

Query: 136  VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
                 E     +   +A TL         +++ +++ ++ +G+L    +  +    +  +
Sbjct: 864  AFRFLELESLHIISEVAQTL-KCSSFSGSFYLRLSDVRLTNGLLMLSDIPRESHARKEFL 922

Query: 196  VLRAIDKLDKFGL-----------QGVKLLLGEGRTDNSGDFTKGANLT-----SEQIDI 239
             L + +      +            G    L +    +  D TK   L       E    
Sbjct: 923  KLLSNEVAAHVHIGTSSKTPSTMQNGRWRFLLKQMRAHGMDHTKMEALEPFFTLPEDGMA 982

Query: 240  MVSFLSIDLEKSMHELYELVKG-------------------------TIAGEKGFNELVV 274
             +S L  +           +K                              ++  +EL V
Sbjct: 983  TLSILRREFRTLFARYSTQLKDCVPKGENTKSELRYLQRKQNHVAHVMKDIQEALSELQV 1042

Query: 275  ISELVRKSGYNSNRIKISSTIV---RGLEYYTGCVYEAI-LGFPVMNEKQKPVVFGSVGG 330
            + + +      S    I   +        + +G +++A+ L     + K   +       
Sbjct: 1043 LLQDIETLSCVSGAACIRIDLGLDPHPHRFGSGLLFQALSLDSNAGSHKAPSLGVKVFAE 1102

Query: 331  GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK----------------E 374
            GGRYD L++RF+          +G   +  ++  L +                       
Sbjct: 1103 GGRYDSLITRFRLPVAHLKKTFVGAIGIRFSMDRLIAGFMTSNDLTNEVKTSGLEALLRS 1162

Query: 375  MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
               +L+ + D  SD+         +L  AGI A+       +  +   Y  +++ P  +I
Sbjct: 1163 RPIILVCSTDLTSDTTFIRMRVATVLWRAGINADFIHPEYPHIEDLEAYCQQQSIPWMVI 1222

Query: 435  QGTG-ERSRGMLQIKDLA 451
                  + +  +++K + 
Sbjct: 1223 VQQHLTQDKNQVKVKSVR 1240


>gi|220904224|ref|YP_002479536.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254782896|sp|B8IZD1|SYP_DESDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219868523|gb|ACL48858.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 574

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+ N+I  ++R   E  GF  +  P+++  D L K     +  
Sbjct: 31  MVRRLTSGLYIYLPLGLRVINKIARTVREEMEKAGFRELLMPMVQPGD-LWKETGRWEHY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +   +D + +   L         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRFKDRNEREYCLGPTHEEVITDLVRGEVRSYRQLPVRLYQVQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D     AE +   M          +G
Sbjct: 150 MRGREFMMKDGYSFDATAEGAEESYKIMYDAYMSIFSRLG 189



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 1/98 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +     VL+       +  +K +    +L+  GI   +     +  G + K AD  
Sbjct: 462 FPPPVAPFECVLLNLDPRSEEVNAKVEEIYALLQGMGIEVLLDDREER-PGVKFKDADLL 520

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             P+ ++ G     RG+++ KD   G++      + E 
Sbjct: 521 GIPMQLVVGGKGLGRGIVECKDRRTGEKGELSAASLEQ 558


>gi|72162507|ref|YP_290164.1| threonyl-tRNA synthetase [Thermobifida fusca YX]
 gi|123747139|sp|Q47N28|SYT_THEFY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71916239|gb|AAZ56141.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermobifida
           fusca YX]
          Length = 659

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/433 (12%), Positives = 124/433 (28%), Gaps = 44/433 (10%)

Query: 66  PNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
               +FS  D+ G  +++        + R V E +         Y+        K G   
Sbjct: 266 VELDLFSFPDELGSGLAVFHPKG--GVVRKVMEEYSRRRHEEAGYQFVNTPHISKAGLFE 323

Query: 125 FRQFIQCDVDNVGSSAET--ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
               +    D +    +   AD  +  M       +   R   +  +  R    G + + 
Sbjct: 324 TSGHLPNYADAMFPPIQFEGADYYLKAMNCPMHNLIYRSRGRSYRELPLRLFEFGTVYRY 383

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
              G      R       D       + +   L +       D  +   L+   +++   
Sbjct: 384 EKSGVVHGLTRARGFTQDDAHIYCTKEQMPDEL-DRLLTFVLDLLRDYGLSDFYLELSTR 442

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
             S        E  E  +      +  N  +V+             ++    I R  +  
Sbjct: 443 DDSPKFIGEPQEWEEATEILRQAAQKQNLELVMDAGGAAYYGPKISVQAKDAIGRTWQMS 502

Query: 303 T-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
           T    ++    F +  +         V                 +    F        V 
Sbjct: 503 TIQVDFQQPKRFELEYQAADGSRQRPVM----------------IHRALFGSIERFFAVL 546

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+    +      + PV +  +   S+ +   +   + LR  G+R E+     +    ++
Sbjct: 547 LEHYAGAFPAW--LAPVQVVGIPIASEHVPYLEDVARRLREHGVRVEVDASDDR-MQKKI 603

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           + A ++  P  ++ G  + S+G +  +    G + +                  +PI + 
Sbjct: 604 RNAQKQKIPFMLLAGDNDVSKGAVSFRY-RDGSQNNG-----------------VPIDKA 645

Query: 482 VSTVKKILQENKE 494
           +  +  +++E ++
Sbjct: 646 IEEILTVIRERRQ 658


>gi|298294395|ref|YP_003696334.1| tRNA synthetase class II (G H P and S) [Starkeya novella DSM 506]
 gi|296930906|gb|ADH91715.1| tRNA synthetase class II (G H P and S) [Starkeya novella DSM 506]
          Length = 372

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           + +  +Y   GF  +E P+L+ +D+      +E R    +F   D +G+ + LR DLT P
Sbjct: 9   EELLALYARAGFARVEPPVLQPADAFLDLSGEEMRRT--MFLTTDPEGRELCLRPDLTLP 66

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           + R                 +G VFR++  
Sbjct: 67  VCRLYIAEGAVQPRDFA--YLGTVFRSDAP 94


>gi|288575624|ref|ZP_05977335.2| proline--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288567367|gb|EFC88927.1| proline--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 581

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 71/568 (12%), Positives = 155/568 (27%), Gaps = 100/568 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 37  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 94

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 95  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 154

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +   ++     +   + 
Sbjct: 155 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLGLEFRPVAADTGSIG 214

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       + TK      + 
Sbjct: 215 GTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAA-AQAELTKVHTPNVKT 273

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           ID +V FLSI +EK++                     HE  ++    +AG K    +   
Sbjct: 274 IDSLVDFLSIPIEKTLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLNMAAP 333

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +  + G N   +       +   ++ T    + ++G    +       FG       +
Sbjct: 334 AAIRAQFGANGGSLGPVGFKGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEF 393

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 394 VDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 453

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M P  +  +  +                 L  AG
Sbjct: 454 GIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAG 513

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
               +     +  G  L  ++    P  I+ G      G +                   
Sbjct: 514 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNV------------------- 553

Query: 465 SWREARVAQ-ITIPISELVSTVKKILQE 491
            + E R  Q  T+ ++E+   V   L++
Sbjct: 554 EYAERRDNQAQTVGLNEIAGKVLAALKD 581


>gi|225629719|ref|ZP_03787682.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591428|gb|EEH12505.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 86

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 2/86 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I  +    ++          LR   +        +     ++K A++ N  +A+I G  E
Sbjct: 1   IYLIPIGREAEEYALTLANELRRNDLYVIYEYSGA--LKTRMKKANQANAKVALIFGDEE 58

Query: 440 RSRGMLQIKDLAKGKELSREIKNNES 465
            S   L+IK++  G+E      N   
Sbjct: 59  LSSKTLKIKNMDTGEEKIIARDNTIE 84


>gi|152996360|ref|YP_001341195.1| prolyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189083502|sp|A6VXT1|SYP_MARMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150837284|gb|ABR71260.1| prolyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 574

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 64/547 (11%), Positives = 144/547 (26%), Gaps = 87/547 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++ +G        +++  +I + +R+  E  G   +  P ++ ++ L +      + 
Sbjct: 31  MIRQVSKGLYTWLPTGLKVFRKIENIVRDEMEKAGSLEVMMPGVQPAE-LWQETGRWQKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  LQD  G+   L     ++   LAR    ++  +      ++I   FR+E     
Sbjct: 90  GPELLRLQDRHGREYCLGPTHEEVITELARNELTSYKQLPMNF--FQIQTKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETAD--AEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILE 180
              +  +  + +  S    A+   E   +M      V  +   +Y     +   + G   
Sbjct: 148 GVMRSREFCMKDAYSFHVGAESLQETYDIMHKAYCNVFDRIGLNYRPVRADTGSIGGAYS 207

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  D   + +    + D      L    + L E     + D T+      + I  +
Sbjct: 208 HEFHVLADSGEDDIAFSDSSDFAANIELAE-AICLKEKADAPTQDITEVFTPDCKTIAKV 266

Query: 241 VSFLSIDLEKSMHEL------------------------YELVKGTIAGEKGFNELVVIS 276
             FL +D+  ++  +                         E+    +AG     E    +
Sbjct: 267 AEFLKLDVTSTVKTMLIKAVDENDQPTIAALVLRGDHNINEIKVEKLAGVVIPFEFADEA 326

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR--- 333
           +++ K+G     I       +G+          +  F     K      G          
Sbjct: 327 DIIAKTGCAPGSIGPKGLAEKGIRVIADRSAAVMSDFCAGANKDDYHFTGLNWERDCAEF 386

Query: 334 -----------YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                            +                      ++L+++  +      V+   
Sbjct: 387 EVADIRNVVEGDPSPDGQGTIVIKRGIEVGHIFQLGQQYAEALKATVLDENGKAQVMHMG 446

Query: 383 MDHDSDSLSKYQMYTQMLRTAGI------------------------RAEMF-------- 410
                 S        Q     GI                        R E          
Sbjct: 447 CYGIGVSRIVAAAIEQNFDEKGILWPESIAPFDIAIVAMNYDKSEAVRTECDRLYAELKA 506

Query: 411 -------LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
                      +  G +    +    P  ++ G     +G L+ K    G      I + 
Sbjct: 507 KGLDVLLDDRKERPGVKFADCELLGIPHRLVVGDKGLEKGTLEYKYRKAGDNEDIAIADA 566

Query: 464 ESWREAR 470
             +  ++
Sbjct: 567 VEFILSK 573


>gi|326681092|ref|XP_002667149.2| PREDICTED: eukaryotic translation initiation factor 2-alpha kinase 4,
            partial [Danio rerio]
          Length = 1499

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 78/471 (16%), Positives = 153/471 (32%), Gaps = 92/471 (19%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             +++  + +++  I+  +G   ++TPLL   +   + L +            D  G  +S
Sbjct: 974  AKLQQYVYETVTRIFRRHGAVRLQTPLLLPRN---RRLYEG----CETACFMDHSGMLVS 1026

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA-- 140
            L YDL    AR+VA N    +   + Y I  VFR  K      R+ ++C  D +   +  
Sbjct: 1027 LPYDLRLAFARFVARNN---ISHLKRYSIERVFRPRKLDRVHPRELLECAFDIIIPISSS 1083

Query: 141  -ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
                   +  +     E   ++  +Y I +N+  +L  IL    +  D   +   I+  A
Sbjct: 1084 LMPDAEAIYTVSEVIQEFSALQDRNYTIHLNHTSLLKAILLHSVVPEDKLTHASNILCDA 1143

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL--EKSMHELYE 257
            +                +             +L++  +  +  F+      ++ +  +  
Sbjct: 1144 MS--------------EKLTKREVEAKFCNLSLSNNSMQTLYKFIEQKGGLQELLPLINS 1189

Query: 258  LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            L K   +      +  +       S      +K+   +  GL Y        I  F    
Sbjct: 1190 LTKQKSSAVSQMAKQGLKDLEELLSLLKKLTLKLQVVVNLGLVYKVQHHCGVIFQFVAFI 1249

Query: 318  EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
             ++K  V   +  GGRYD L+   +G     +G         +AL  +            
Sbjct: 1250 RRRKRTVPDILAAGGRYDHLIHELRGPT--VSGVVPSAVGASLALDKI-----------C 1296

Query: 378  VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
              +++M+     L          R AGI                           ++   
Sbjct: 1297 SAVSSMEEQEALLEHC-------RQAGIT------------------------FMVLVSD 1325

Query: 438  GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST-VKK 487
             E     L++K                S+ + R ++  IP S+LV   ++K
Sbjct: 1326 KE--GNYLKVK----------------SFEKDRQSEKRIPESDLVDHFIQK 1358


>gi|148269548|ref|YP_001244008.1| prolyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166980169|sp|A5IJQ9|SYP_THEP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147735092|gb|ABQ46432.1| prolyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 577

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 60/522 (11%), Positives = 139/522 (26%), Gaps = 78/522 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I + +R      G   I  P+L+ ++ L K     D     +  L
Sbjct: 38  GIYTYLPLGRRVLLKIENIVREEMNRIGAQEILMPILQPAE-LWKQSGRWDDYGPEMMKL 96

Query: 74  QDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +D   +  +L     ++   L     R   +   T+      YR     R        F 
Sbjct: 97  KDRHERDFTLGPTHEEIVTDLVKNELRSYKQLPLTLYQIANKYRDEIRPRFGLLRAREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG--IKRNDYHIGINNRKILDGILEKIGL 184
                       S +    E     +  +E +G      +   G          +    +
Sbjct: 157 MKDAYSFHASWESLDETYEEFKKAYSRIMERLGVRYMIIEAETGAIGGNASHEFVVPAKI 216

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN--------SGDFTKGANLTSEQ 236
              + L       +A D+  ++  +  +    E   +           + +K   ++  +
Sbjct: 217 GETNVLFCEKCGYQASDEKAEYRGEYTQEQEKEKTLEKVPTPGVKTIEEVSKFLGVSPSK 276

Query: 237 IDIMVSFLSIDL------EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           I   + +   +          +      +K  +  +     +    E+++  G     I 
Sbjct: 277 IVKSLLYKGREGYVMVLIRGDLELNEAKLKAHLKDQSL--RMATPEEILKDFGVPVGFIG 334

Query: 291 ISSTIVRGLEYYTGCVYE-AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                V+ +  ++    +  ++G    +                +  L +  +G   P  
Sbjct: 335 PIGVDVKKVADHSVRGLKNFVVGGMEEDTHYVNANHPRDFKVDEWYDLRTMVEGDPCPVC 394

Query: 350 ------------------GFSIGISRLIVALKSLESS--------------------TNN 371
                             G     +     +                           + 
Sbjct: 395 GEPLKATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMGCYGWGVSRTMAAVVEHF 454

Query: 372 IKEMGPVLITTMD-----------HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
             E G +   ++            +D++     +   Q+L   G    +      + G +
Sbjct: 455 HDENGMIWPLSIAPYTVVVDILNMNDAEQKQVGEKIYQVLSEKGEEVVLDDREV-SPGFK 513

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            K AD    P+ I  G      G++++K     + +   IKN
Sbjct: 514 FKDADLIGFPIRINVGRS-LKEGVVELKKRYSKELVKVNIKN 554


>gi|296110556|ref|YP_003620937.1| threonyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832087|gb|ADG39968.1| threonyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 654

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/450 (11%), Positives = 112/450 (24%), Gaps = 83/450 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G          IR ++   I +     G+  + TP+L   +   K     D   + +F 
Sbjct: 265 SGLPVWLPNGATIRRQVERYITDKELANGYQHVYTPVLSNLNLY-KTSGHWDHYREDMFP 323

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+++ LR                        ++  P    E          +  
Sbjct: 324 PMDMGDGEFLELRP--------------MNCPSHIMVFKHKPRSYRELPIRIAELGMMH- 368

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A   +  +   TL           +    + IL  ++E      D  + 
Sbjct: 369 -----RYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMEVYR---DFNIT 420

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D+       A L     D+ + +   + E +
Sbjct: 421 DYRFRLSYRDPKNT----------EKYFDDDEMWEKSQAQLKRAMDDLKLDYYEAEGEAA 470

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                                                          L+  T        
Sbjct: 471 F------------------------------------------YGPKLDVQTKTALGGEE 488

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               +          ++   G       R    +    G     +  +  ++  + +   
Sbjct: 489 TMSTIQLDFLLPERFNLTYIGADGQDNHRPVMLHRGIVGTMERFTAYL--IEMYKGAFPT 546

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  ++  +          + L+ AG+R  +    +K  G  ++ A     P 
Sbjct: 547 WLSPLQVQIIPVNL-AAHGDYANAVQKELQAAGLRVNVEKKEAK-MGYLIREAQTNKVPY 604

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            ++ G  E +   + I+    G+E ++ + 
Sbjct: 605 TLVLGDSEVNEQTVTIR--KYGEEKTQTVA 632


>gi|260424720|ref|ZP_05778980.1| proline--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402944|gb|EEW96491.1| proline--tRNA ligase [Dialister invisus DSM 15470]
          Length = 576

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 63/544 (11%), Positives = 136/544 (25%), Gaps = 94/544 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R ++  G        +R   ++ D +R      G   I  P+ + ++   K  
Sbjct: 28  MLKAGMMR-KVSNGLYAFLPLALRSVRKVEDIVREEMNAIGSQEILMPITQPAEI-WKQS 85

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGP 113
              D   + +F L D  G    L     +L   LA+    ++  +          YR   
Sbjct: 86  ERWDVYGEEMFKLNDRHGHEYCLGPTHEELVTVLAKMDTSSYKQLPVSLYQIQNKYRDEK 145

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
             R        F        D      +     M           G+    +   + +  
Sbjct: 146 RPRFGLMRSREFIMKDAYTFDMDEEGLDRQYHLMYDAYTRIFTRCGLH---FRPVVADSG 202

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            + G          D     ++  +  D          K L      D + +  +     
Sbjct: 203 AIGGSGSHEFEVIADSGEADIVYCKDCDFAANIEAVEPKALSSSVHNDKAKEIVETPG-- 260

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKG-------------------------------- 261
              I ++  FL + +  S+  +   +                                  
Sbjct: 261 QHTIQMVCDFLHVPVVCSVKAVVYKLDDTVVLALVRGDHEVNEVRLQNLFNAVNVGLASD 320

Query: 262 -------------TIAGEKGFNELVVISEL----VRKSGYNSNRIKISSTIVRGLEYYTG 304
                        +  G K  +   +I +     +  +   +N +      V     +  
Sbjct: 321 EDLKRCGLIAGYISPIGLKKADNFEIIVDTTVMEMEDACCGANAVDKHYVHVNPKRDFGD 380

Query: 305 CVYEAI-----------LGFPVMNEKQKPVVFGSVGG-------GGRYDGLVSRFKGQNV 346
              E I            G  +  +K   V      G       G  Y     +     +
Sbjct: 381 VRVETIRLITAEDCCPKCGGMIELKKGIEVGQVFKLGTKYSEKLGCTYLDRDGKTHPMVM 440

Query: 347 PATGFSIGISRLIVALKSLES----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQML-- 400
              G  I  +      ++ +         I     V++   + D   ++  +     +  
Sbjct: 441 GCYGIGITRTVAASIEQNHDKDGIIWPVAIAPYEVVIVPANNKDEGVMNAARHLYDKMED 500

Query: 401 -RTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            R       +     +       K AD    P+ +  G   +  G+++++    G     
Sbjct: 501 CRDE---VILDDRDERAGIK--FKDADLIGYPIRVTIGKKWKESGLVEVRLRRSGVVSEV 555

Query: 459 EIKN 462
            + +
Sbjct: 556 ALAD 559


>gi|303243566|ref|ZP_07329908.1| threonyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302486127|gb|EFL49049.1| threonyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 631

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/394 (11%), Positives = 108/394 (27%), Gaps = 35/394 (8%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
            V EN    V     Y +G     E       RQ+     +        A     MM  D
Sbjct: 250 MVVENNGMPVETPVMYDLGNKAIREHADKFGERQYRFKQGNKELMLRFAACFGQFMMKKD 309

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
                       +         +   E +GL          +     D          + 
Sbjct: 310 MYILPKHLPLKLYELSTYSFRYEQRGELVGLKRLRAFTMPDMHTVCYDIKQAMEEFENQF 369

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
            +     D+                I+  +     +++    +++ K     + G + ++
Sbjct: 370 WMCLKTGDDLNTPY----------SIIFRYTKDFFDENKEWFFKIAKEYKE-KYGKDVIL 418

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
            +    +        + +  +  R +E  T       +   V + K+  +V    G    
Sbjct: 419 ELLPKRKHYWVGKVDMAVIDSFGRPIENPT-------VQIDVESAKRFNIVVHD-GNEKI 470

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y  ++      +V      +     + A     +       + P+ +  +          
Sbjct: 471 YPIILHCSPTGSVERVLCGLLEKASMDA--EAGAPPMLPVWLSPIQVRVIPVSDAHNDYA 528

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
               + LR   IR + +    ++ G +++ A +   P  ++ G  E    +L I      
Sbjct: 529 LNIAKKLRENNIRVD-YDDREESVGKKIRNAGKDWIPYVVVIGDEEVKNNILTI------ 581

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKK 487
                     E     +  +  + + EL+  +K+
Sbjct: 582 -------TVREKSALKKPVKEKMTVDELIERIKE 608


>gi|294668560|ref|ZP_06733657.1| proline--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309523|gb|EFE50766.1| proline--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 569

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 70/566 (12%), Positives = 152/566 (26%), Gaps = 98/566 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  + + ++     +   + 
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLDLEFRPVAADTGSIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE  T    +  K      + 
Sbjct: 204 GTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAT-AQAELAKVHTPNVKT 262

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           ID +V FLSI +EK++                     HE  ++    +AG K    +   
Sbjct: 263 IDSLVDFLSIPIEKTLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMADP 322

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +  + G N   +       +   ++ T    + ++G    +       FG       +
Sbjct: 323 AAIRAQFGANGGSLGPVGFTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEF 382

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 383 VDLRNVVEGDESPDGQGRLKLTRGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 442

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M P  +  +  +                 L  AG
Sbjct: 443 GIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAG 502

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
               +     +  G  L  ++    P  I+ G      G +                  E
Sbjct: 503 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNV------------------E 543

Query: 465 SWREARVAQITIPISELVSTVKKILQ 490
                     T+P  E+ + V   L+
Sbjct: 544 YAERRNNEAQTVPTGEIAAKVLAALK 569


>gi|225076521|ref|ZP_03719720.1| hypothetical protein NEIFLAOT_01569 [Neisseria flavescens
           NRL30031/H210]
 gi|224952200|gb|EEG33409.1| hypothetical protein NEIFLAOT_01569 [Neisseria flavescens
           NRL30031/H210]
          Length = 570

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 70/568 (12%), Positives = 156/568 (27%), Gaps = 100/568 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENIVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +   ++     +   + 
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDAYCRIFARLGLEFRPVAADTGSIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       + TK      + 
Sbjct: 204 GTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAA-AQAELTKVHTPNVKT 262

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           I+ +V FL+I +E+++                     HE  ++    +AG K    +   
Sbjct: 263 IESLVEFLNIPVEQTLKSIVVEGENEGELVLLLLRGDHEFNDIKAEKLAGVKSPLTMASP 322

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +V + G N   +   +   +   ++ T    + ++G    +       FG       +
Sbjct: 323 AAIVEQFGANGGSLGPVNFKGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEF 382

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 383 VDLRNVIEGDISPDEQGRLKLARGIEVGHVFQLRNKYTQAMNVSFLDNNGKSQIMEMGCY 442

Query: 352 SIGISRLIVALKSLESSTN---NIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A     +        K M P  +  +  +                 L  AG
Sbjct: 443 GIGITRVVAAAIEQNNDEKGIVWTKAMAPFEVVIVPMNYKKSEAVREAADKIYAELLAAG 502

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
               +     +  G  L  ++    P  I+ G      G +                   
Sbjct: 503 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNV------------------- 542

Query: 465 SWREARVAQ-ITIPISELVSTVKKILQE 491
            + E R  Q   + ISE+V+ V   L  
Sbjct: 543 EYAERRDNQAQAVAISEVVAKVLAALNA 570


>gi|224542659|ref|ZP_03683198.1| hypothetical protein CATMIT_01843 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524369|gb|EEF93474.1| hypothetical protein CATMIT_01843 [Catenibacterium mitsuokai DSM
           15897]
          Length = 322

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 63/341 (18%), Positives = 118/341 (34%), Gaps = 47/341 (13%)

Query: 22  EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
           +  +   I   +R  +  + +  +  P  EY+D L  F  +E+     +F   + +G+ I
Sbjct: 21  DASLMRTIEGHLRKTFNAHDYQELLLPTFEYADLLSGFGTNEET----MFQFINHEGKRI 76

Query: 82  SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
           +LR D T P+AR  +          R    G V+R +    GR  +  Q  ++  G    
Sbjct: 77  TLRTDFTVPIARIYS--NAHTDEVRRYSYFGKVYRTQARHKGRSSELFQGGIELFGLPGR 134

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
             D E   ++ +T++ +G+                  LE        +L   ++     D
Sbjct: 135 EGDQECLSLIEETMQNIGLSDLK--------------LELGSAKFYKRLLTLVMDRSLTD 180

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
            L K     +K L+     D             +   +++   S           + +  
Sbjct: 181 ILKKKKSSEMKHLVEAHDFD------------EDLNKLLLILPSAFGNIKCLREVKEIVK 228

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                    E+  + E  +        I     +V    YYTG + +    +        
Sbjct: 229 DEELLVAIEEMESLYEFSK----YKENIIFDLCMVPERSYYTGIMMKGFSYYSAH----- 279

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
                 +  GGRYD L   F  +NVP+ GFS  ++ ++ A+
Sbjct: 280 -----PILQGGRYDHLFDHF-YKNVPSIGFSYHLNNVLDAI 314


>gi|145297802|ref|YP_001140643.1| prolyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166980094|sp|A4SJ23|SYP_AERS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|142850574|gb|ABO88895.1| prolyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 574

 Score = 72.2 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  +I + +R    N G   +  P+++ ++ L +     D  
Sbjct: 31  MIRKLASGMYAWLPSGLRVLKKIENIVREEMNNAGAIEVSMPVVQPAE-LWQESGRWDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L D   +   L     ++   L RY   ++  +       +  
Sbjct: 90  GPELCRLTDRHNRPFVLGPTHEEVITSLVRYEVNSYKQLPLNLYQIQTK 138



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M        + Q +   L+ AG+   +F    +  G      +    P AI+ G    
Sbjct: 483 MNMHKSERVAEQAQQFYAELKAAGVDV-LFDDRKERPGVMFADMELLGVPHAIVIGDRGL 541

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G+++ K    G++    I    +  +A+
Sbjct: 542 DNGVVEYKCRRSGEKQEVAITEIVAMLKAK 571


>gi|117619295|ref|YP_858106.1| prolyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|152074744|sp|A0KPA5|SYP_AERHH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117560702|gb|ABK37650.1| prolyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 574

 Score = 72.2 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  +I + +R    N G   +  P+++ ++ L +     D  
Sbjct: 31  MIRKLASGMYAWLPSGLRVLKKIENIVREEMNNAGAIEVSMPVVQPAE-LWQESGRWDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L D   +   L     ++   L RY   ++  +       +  
Sbjct: 90  GPELCRLTDRHNRPFVLGPTHEEVITSLVRYEVNSYKQLPLNLYQIQTK 138



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M        + Q +   L+ AG+   +F    +  G      +    P AI+ G    
Sbjct: 483 MNMHKSERVAEQAQQFYAELKAAGVDV-LFDDRKERPGVMFADMELLGVPHAIVIGDRGL 541

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G+++ K    G++    I    +  +A+
Sbjct: 542 DNGVVEYKCRRTGEKQEVAISEIVALLKAK 571


>gi|303276522|ref|XP_003057555.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461907|gb|EEH59200.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1543

 Score = 72.2 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 67/505 (13%), Positives = 143/505 (28%), Gaps = 65/505 (12%)

Query: 27   NRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV-FSLQDDDGQWISLRY 85
             ++L ++R  +  +G  P+ + ++ ++   G                L    G  + LR 
Sbjct: 1064 EKMLATLRAAFRRHGASPLSSRVVSWAREGGGGGGGGGAAAGEEGHRLLTRSGALVVLRR 1123

Query: 86   DLTAPLARYVAEN---FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            DL + + R VA              T+R G     EK         +      +      
Sbjct: 1124 DLRSAIVRQVAAEEATSLRACCVGITFRSGGGGGGEKPAGPDGEGKVNGGRGGLPREHVQ 1183

Query: 143  ADAEMC-------------MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
            AD ++                +    +A+  +  +  + +N+RK+L     K G+  + +
Sbjct: 1184 ADFDVIAPKDGADPSIAEAECVKCVWDALVERGLEPKVTLNHRKVLASGWVKTGVPPEAR 1243

Query: 190  LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 ++ R     +      V   L                  + ++  + +  S D  
Sbjct: 1244 ARVAAMLRRYAAAAEPAETPRVVAGLASVGK--------QTPAVAAKVASLHALASDDAR 1295

Query: 250  KSMHELYELVKGTIAGEKGFNELVVISE---LVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             ++  L +            N L  + +    +   G  ++ I ++  +     Y+ G  
Sbjct: 1296 AAVEYLRDAWSDAEGAAAMANALRHVGDVATHLGSMGVPAHAIALAPFLPPPESYHAGAY 1355

Query: 307  YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            +E  +                V  GGRYDG +                         ++ 
Sbjct: 1356 FEITVRS--------TGKRVCVAAGGRYDGWMQAAWTARGAGAAAGAPAPGGCGVSVAVR 1407

Query: 367  SSTNNIKEMGP---------------VLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMF 410
             +                          +          L +       L   G+RAE  
Sbjct: 1408 KAATLAAAAVGGSAGGSASSSSSAAATDVLVCARGGGGLLHERLALASDLWRVGVRAETT 1467

Query: 411  LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREA 469
               S +   Q ++A+ R     +         G  +++K L                   
Sbjct: 1468 PSPSPSATEQYQHANARGARWMVTIDHSLLIAGERVRVKSLT------------GGGGFG 1515

Query: 470  RVAQITIPISELVSTVKKILQENKE 494
            R A+  +P  E+V  ++  L + + 
Sbjct: 1516 RGAERDVPRDEVVEVLRGALSKTRR 1540


>gi|320102238|ref|YP_004177829.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Isosphaera
           pallida ATCC 43644]
 gi|319749520|gb|ADV61280.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Isosphaera
           pallida ATCC 43644]
          Length = 752

 Score = 72.2 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/476 (10%), Positives = 118/476 (24%), Gaps = 41/476 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   +R  +   +++     G+ P+ TP +   +            +    +
Sbjct: 282 SGLVLWMPKGAMVRTILQQFLQDELLKRGYQPVYTPHIGRVELYKTSGHYPYYSDSQFPT 341

Query: 73  LQ---DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           L+   D   + +               E+ + +        +                  
Sbjct: 342 LKLLSDPAKRLVE------------AIESGEAMDDATACRLLSEAGIPPVSVTPGSGSGG 389

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                 +      A      +  + L       +   I    ++    +  ++   G   
Sbjct: 390 ARSFTEMSPGERAAYVREHGVAEEYLLKPMNCPHHIEIYKAQQRSYRDLPVRLAEFGTVY 449

Query: 190 LNERLIVLR---------AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             E+   L            D       + V+    E        F   +   S+    +
Sbjct: 450 RYEQSGELSGLTRVRGFTQDDAHLFCTPEQVRSEFAETM--RLTQFVLESLGLSDYRVRL 507

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                 D +    +    +K          +L +  +     G  +     +  +VR   
Sbjct: 508 SRSDPDDPKFQGADASIWLKAEADIRAVLEDLGLPYD--EGIGEAAFYGPKADFLVRDC- 564

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
                    +    V+ E+      G               +   +    F      + +
Sbjct: 565 LGRQWQLGTVQLDYVLPERFGLEYIGPDNA---------PHRPVMIHRAPFGSMERFMGI 615

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            ++    +         V +  +          +     LR AG+RAE+     +  G +
Sbjct: 616 LIEHFAGAFPLWLAPEQVRVLPIS--DKFNEYGRTVLHTLRQAGLRAELD-QRPEKIGAK 672

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           ++ A     P+ ++ G  E   G +  +D   G      + +  +     V    I
Sbjct: 673 IRDAQLEKIPVMLVVGAKEAETGTVSYRDRVDGDRGVVSLADAVASLRREVETRAI 728


>gi|325266259|ref|ZP_08132938.1| proline--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982221|gb|EGC17854.1| proline--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 569

 Score = 72.2 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/565 (9%), Positives = 134/565 (23%), Gaps = 96/565 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ +D L K  
Sbjct: 26  MLRAGLIKANA-SGLYTWMPMGLRVLRKVENIVREEMNRAGAIELLMPVIQPAD-LWKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D     +  + D             ++   + R    ++  +       +       
Sbjct: 84  GRWDFYGDELLRITDRHDNEFCFSPTCEEMVTDIVRKEVNSYKQLPKNFYHIQTKFRDER 143

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +  E    M D    V  +   ++     +   + 
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADFASLQETYQAMYDAYCRVFGRLGLNFRPVAADTGSIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV----------KLLLGEGRTDNSGDF 226
           G          +   + +    A D      L             +  L +  T      
Sbjct: 204 GTGSHEFQVLAESGEDVIAYSDASDYAANVELAQTLPLSGSRAAAQKNLEKAHTPEVKTI 263

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE----------LVVIS 276
            +  +     ++  +  + ++ E     +  L++G         E          +    
Sbjct: 264 AQLVDFLQIPVETTLKSIVVEGENEGELVLLLLRGDHEFNDIKAEKLAGVKSPLTMAQPE 323

Query: 277 ELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
            ++   G N   +       R   ++ T    + ++G            FG       + 
Sbjct: 324 HILAAFGANGGSLGPVGFKGRVYADFATEKGADWVIGANEDGFHYTGFNFGRDAAEPEFA 383

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVA---------------------------------- 361
            + +   G   P    S+ ++R I                                    
Sbjct: 384 DIRNVVAGDPSPCGKGSLQLARGIEVGHVFQLRDKYSAALNASFLDNNGKSQIMEMGCYG 443

Query: 362 --------------LKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGI 405
                                  +       +I  M+                 L  AG+
Sbjct: 444 IGITRVVAAAIEQNHDERGIIWTDTMAPFAAVIVPMNYKKSEAVREAADKIYADLLAAGV 503

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              +     +  G  L  ++    P  I+ G      G +                  E 
Sbjct: 504 DVLLDDRDERA-GVLLADSELLGIPHRIVIGDRGLKEGNV------------------EY 544

Query: 466 WREARVAQITIPISELVSTVKKILQ 490
            R       ++P+ ++ + V   L+
Sbjct: 545 ARRTDSEAQSVPVGDIAAHVAAQLR 569


>gi|326333619|ref|ZP_08199856.1| proline--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948525|gb|EGD40628.1| proline--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 582

 Score = 72.2 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 1/111 (0%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L  +  +         V +     DS          + L  AGI          + G + 
Sbjct: 472 LDEIGLAWPRNVAPYDVHLVATGKDSAVFEAAATLAEELEAAGIDVLYDDRPKVSPGVKF 531

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           K A+    P  +  G G    G +++KD   G++    + +  +     VA
Sbjct: 532 KDAELIGVPTIVTVGKG-LVEGKIEVKDRKSGEKTEVALADAVAHLTEVVA 581



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+  ++   IR    + G   +  P L   E  ++ G++    D    G+
Sbjct: 36  GIYSWLPLGLRVLGKVEQIIREEMASIGSQEVHFPALLPREPYEATGRWTEYGD----GI 91

Query: 71  FSLQDDDGQWISLRY 85
           F L+D       L  
Sbjct: 92  FRLKDRKEADYLLGP 106


>gi|237800045|ref|ZP_04588506.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022900|gb|EGI02957.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 133

 Score = 72.2 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 2/130 (1%)

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                GF++GI RL++ L++LE     I     V +      ++  +         R   
Sbjct: 4   PTAGVGFAMGIERLVLLLETLEQVPEEIARQVDVYLCAFGEAAELAALALTEKVRDRLPT 63

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNN 463
           +R ++  G+  +F +Q K AD+     A+I G  E +  ++ +K L  +G++ +      
Sbjct: 64  LRLQVNAGAG-SFKSQFKKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDAL 122

Query: 464 ESWREARVAQ 473
                A V Q
Sbjct: 123 AEHLAACVVQ 132


>gi|294084092|ref|YP_003550850.1| prolyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663665|gb|ADE38766.1| prolyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 437

 Score = 72.2 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/460 (10%), Positives = 116/460 (25%), Gaps = 63/460 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ ++I + +R      G   I  P ++ ++ L +     D     +  +
Sbjct: 38  GIYSWLPLGKRVLDKIENIVREEQNRAGALEILMPTIQPAE-LWQESGRYDDYGAEMLRI 96

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D   + +                                          +     +  V
Sbjct: 97  VDRHERNM----------------------------------LYGPTNEEQITDIFRAHV 122

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            +  +              +     GI R    +        D     +          R
Sbjct: 123 RSYKALPLNMYHIQWKFRDEVRPRFGIMRGREFLM------KDAYSFDLDGDKARAAYNR 176

Query: 194 LIVLRAIDKLDKFGLQ-GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           + V               ++   G    D S +F   A      +     +++I+L+  +
Sbjct: 177 MFVSYLKTFARMGLTAIPMEADTGPIGGDMSHEFIILAETGESGVYFHKDWMNINLDADI 236

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI-L 311
               +L          +     + +           + +    +  + Y+     EA+  
Sbjct: 237 DYNADLQPFVDKYTSLYARADDMHDADNCPVTADELMSLRGIEIGHIFYFGTKYSEAMGA 296

Query: 312 GFPVMNEKQKPVVFGSV-GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                + K  PV  GS   G  R  G +      +                        +
Sbjct: 297 TVSGPDGKAVPVHMGSYGIGVSRLVGGIIEASHDDKGII------------------WPD 338

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
           ++   G  ++     D+   ++ +   +    AG+   +   + +  G ++   D    P
Sbjct: 339 SVAPFGVAIVNLKPGDAVCDAEAERLYEQFDNAGLEPLLDDRNDR-PGAKMASMDLIGIP 397

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             I+ G       M+++K    G+       +       R
Sbjct: 398 WQIVVGPRGMENNMVEVKRRKTGETAEMSPDSAVIKILNR 437


>gi|328783713|ref|XP_001120977.2| PREDICTED: eukaryotic translation initiation factor 2-alpha kinase 4
            [Apis mellifera]
          Length = 1553

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 86/475 (18%), Positives = 166/475 (34%), Gaps = 59/475 (12%)

Query: 29   ILDSIRNIYENYGFDPIETPLLEY-SDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDL 87
            +   +  +++ +G   + TPLL   S     F P           L   +G  + + +DL
Sbjct: 974  VKSKVIEVFQRHGGVYLGTPLLIPKSHQFCSFSPSS-------VKLMTRNGNIVCIPHDL 1026

Query: 88   TAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET--ADA 145
             A  ARY+  N    V   R Y I  VFR++K      R+  +C  D +    +    +A
Sbjct: 1027 RAVFARYIVWNN---VPHIRRYAIERVFRDKKVLGFHPRELYECAFDIINPIPDNLLMEA 1083

Query: 146  EMCMMMADTLEAVGI-KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
            E+  ++ + +  +   +  ++ I +N+  +L  +L   G+   +K  +   +LR      
Sbjct: 1084 ELIYIVWEIINELPSLQERNFTIRLNHTSLLQAVLMYCGV-DKEKYQDIYSILRDARDGK 1142

Query: 205  KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA 264
                Q    L+    TD + +       T   +  + S L                    
Sbjct: 1143 FTRFQIQTHLISLCLTDQAMETLFNLFETESSVAKIHSVLKT-------ITRRKGDAAAF 1195

Query: 265  GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
              +G  E+ ++ E +   G     I +   +V  +  ++G +Y+         +K    V
Sbjct: 1196 AREGLKEIEIVMENIETLGIKW-PIVVVPLLVHNVNQHSGIIYQITCEVKWRKKKNGEEV 1254

Query: 325  FGSVGGGGRYDGLVSRFKG-----------QNVPATGFSIGISRLIVALKSLESSTNNIK 373
                  GGRYD ++S FK                  G SI + +L+ A+      +   K
Sbjct: 1255 I---AAGGRYDKMLSSFKKILERTGMASKEIKQYGAGISISLEKLVSAVSETSE-SVECK 1310

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                V I+ MD+      +     + L   G++  +      +    L+Y    +    I
Sbjct: 1311 YGINVAISCMDNHHRG-KEMINLLKELWNLGLKVTILDLI--SLEEILEYCRENSINHVI 1367

Query: 434  IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                            L  G++ S  I   +SW   R  +  +   E+    +++
Sbjct: 1368 F---------------LKNGEKGSVRI---QSWERDRFQEKKMSNQEIGEFFQRL 1404


>gi|316984142|gb|EFV63120.1| prolyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 599

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 67/525 (12%), Positives = 144/525 (27%), Gaps = 86/525 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 55  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 112

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 113 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 172

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      F            +S +T   +M          +G+    +     +  
Sbjct: 173 RPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDAYCRIFTRLGLA---FRPVAADTG 229

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            + G          +   + +      D      L     L GE       +  K     
Sbjct: 230 SIGGTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAA-AQAELVKVHTPN 288

Query: 234 SEQIDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNEL 272
            + ID +V FLSI +EK++                     HE  ++    +AG K    +
Sbjct: 289 VKTIDSLVDFLSIPIEKTLKSIVVEGENEGELILLLLRGDHEFNDIKAEKLAGVKSPLTM 348

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
              + +V + G N   +       +   ++ T    + ++G    +       FG     
Sbjct: 349 ASPAAIVEQFGANGGSLGPVGFAGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAE 408

Query: 332 GRYDGLVSRFKGQNVP-------------------------------------------A 348
             +  L +  +G   P                                            
Sbjct: 409 PEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEM 468

Query: 349 TGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLR 401
             + IGI+R++ A       E      K M P  +  +  +                 L 
Sbjct: 469 GCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELL 528

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            AG    +     +  G  L  ++    P  I+ G      G ++
Sbjct: 529 AAGADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNVE 572


>gi|119384658|ref|YP_915714.1| ATP phosphoribosyltransferase regulatory subunit [Paracoccus
           denitrificans PD1222]
 gi|119374425|gb|ABL70018.1| ATP phosphoribosyltransferase regulatory subunit [Paracoccus
           denitrificans PD1222]
          Length = 360

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 115/360 (31%), Gaps = 33/360 (9%)

Query: 24  RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL 83
           R +  I   I   +   G   +   +L  +++L     ++ R     +  QD     + L
Sbjct: 4   REKQAIGQQILAAFRAAGAQEVAPDILLEAETLLDLYGEDIRARA--YVTQDPIRGEMML 61

Query: 84  RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV----DNVGSS 139
           R D T P+   V  +      P R   +G VFR + HG  R       +       + + 
Sbjct: 62  RPDFTVPV---VQMHMANGAEPARYCYLGEVFRKQDHGETRPEHPRDNEYLQAGFELFAR 118

Query: 140 AETADAEMCMMMADTLEAVG--IKRNDYHIGINNRKILD-------GILEKIGLHGDDKL 190
              ADAE+  +  D L  +       D  + ++  + L         +L  I        
Sbjct: 119 DPEADAEVFALFHDILAPLNLQASMGDMDLLMDAVRALPLSGARRAALLHHIWRPRRFAR 178

Query: 191 NERLIVLRAI---DKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSF--L 244
                   A             G++     + R D        A L  + ++ +     +
Sbjct: 179 LLARFATPAEARSFPESGAPWTGLRSPAEMQARIDRLRGDAAEAPLAPQWVERLERLFAI 238

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG-LEYYT 303
                +++ +L ELV       +  + L      +   G +   +   ++  R  +EYY 
Sbjct: 239 GAPAPEALRQLRELVAEIPDIAEAVDRLERNLAALAARGIDVGAVHFDASHGRHTMEYYD 298

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G  +     F     +  P     V  GGRYD L +        +     GI R  +  +
Sbjct: 299 GMTF----SFAAAGHEDWP----PVASGGRYDALAAVLGQAQGRSIPAVGGIIRPGLVHE 350


>gi|295696152|ref|YP_003589390.1| prolyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411754|gb|ADG06246.1| prolyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 567

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 43/160 (26%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G         R+  +I   +R   +  G   +  P ++ + SL +     D  
Sbjct: 31  MIRQVVSGVYSYLPLGYRVLRKIEAIVREEMDRAGAQEVLLPAVQPA-SLWQESGRWDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +   +D   + + L         DL     R   +   T+      +R     R   
Sbjct: 90  GKELLRFEDRHQRMLVLGPTHEEVITDLVRTEVRSYRQLPMTLYQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D      + +   M           G
Sbjct: 150 MRAREFIMKDAYSFDVDEEGLDRSYRAMYQAYEQIFRRCG 189



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 3/93 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  D+      +     L  AGI   +     +  G + 
Sbjct: 457 DDKGIMWPMPIAPFHVHVLPVNLKDAAQRDAAEQLCTRLEDAGIEVLLDDRDER-PGVKF 515

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             AD    P+ +I G    S G++++K    G+
Sbjct: 516 NDADLMGIPIQLIVGKR-ISEGLVEMKRRKTGE 547


>gi|309378830|emb|CBX22535.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 570

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 74/570 (12%), Positives = 152/570 (26%), Gaps = 104/570 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      F            +S +T   +M          +G+    +     +  
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHTDYASLQTTYQDMYDAYCRIFTRLGLA---FRPVAADTG 200

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            + G          +   + +      D      L     L GE       +  K     
Sbjct: 201 SIGGTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAA-AQAELVKVHTPN 259

Query: 234 SEQIDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNEL 272
            + ID +V FLSI +EK++                     HE  ++    +AG K    +
Sbjct: 260 VKTIDSLVDFLSIPIEKTLKSIVVEGENEGELILLLLRGDHEFNDIKAEKLAGVKSPLTM 319

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
              + +V + G N   +   S   +   ++ T    + ++G            FG     
Sbjct: 320 ASPAAIVEQFGANGGSLGPVSFAGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAE 379

Query: 332 GRYDGLVSRFKGQNVP-------------------------------------------A 348
             +  L +  +G   P                                            
Sbjct: 380 PEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEM 439

Query: 349 TGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLR 401
             + IGI+R++ A       E      K M P  +  +  +                 L 
Sbjct: 440 GCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELL 499

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AG    +     +  G  L  ++    P  I+ G      G +                
Sbjct: 500 AAGADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNV---------------- 542

Query: 462 NNESWREARVAQITIPISELVSTVKKILQE 491
             E           + I E+V+ V   L  
Sbjct: 543 --EYAERRENEAQAVAIGEIVARVTASLNA 570


>gi|299134205|ref|ZP_07027398.1| tRNA synthetase class II (G H P and S) [Afipia sp. 1NLS2]
 gi|298590952|gb|EFI51154.1| tRNA synthetase class II (G H P and S) [Afipia sp. 1NLS2]
          Length = 379

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 76/372 (20%), Positives = 135/372 (36%), Gaps = 54/372 (14%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           D++ + +   G++     +L+ ++       ++ R  K ++   D +G+ + LR DLT P
Sbjct: 17  DALLSAFAGAGYEQAAPAILQPAEPFLDLSGEDIR--KSLYLTTDPNGEDLCLRPDLTIP 74

Query: 91  LAR-YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE--- 146
           +AR Y+A            Y +GPVFR     P  F Q        +  +A  A+     
Sbjct: 75  VARDYLASRRAGQPGNF--YYLGPVFRFRGGKPSEFMQAGVESFGRIDRTAADAEMMALA 132

Query: 147 --------------------MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                               + M + D L    + R       N +  +   +E +    
Sbjct: 133 LEATSAFGVRDLDIRSGDAALFMALIDALRLAPVWRRRLVKCFNRKTSITAEVENLTQGA 192

Query: 187 DDKLNERLIVLRA-----------IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN--LT 233
                E ++   A            D +   G + V         D   + +      L 
Sbjct: 193 GQSDYEGVLAALAGSDRKAALALVTDLMSIAGTENVGGRTTAEIADRFLEQSTLKGGTLA 252

Query: 234 SEQIDIMVSFLSI--DLEKSMHELYELVKGTIA-GEKGFNELVVISELVRKSGYNSNRIK 290
            E + ++  FL+I  + ++++ +L  L            +E       +   G ++  I 
Sbjct: 253 RETLTLIERFLTIAGEPDEALAQLRNLTADAGININAALDEFESRIGFMAARGIDTGEIA 312

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPAT 349
            S++  RGL+YYTG  +E                   + GGGRYDGL++R      +PA 
Sbjct: 313 FSTSFGRGLDYYTGFEFEIRRSNNGSE---------PLVGGGRYDGLLTRLGAASPIPAV 363

Query: 350 GFSIGISRLIVA 361
           GFS+ I  L  A
Sbjct: 364 GFSVWIDALTKA 375


>gi|262372185|ref|ZP_06065464.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           junii SH205]
 gi|262312210|gb|EEY93295.1| ATP phosphoribosyltransferase, regulatory subunit [Acinetobacter
           junii SH205]
          Length = 388

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 70/405 (17%), Positives = 133/405 (32%), Gaps = 50/405 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G AD   ++ ++   +     +     G+  + TP +EY +SL          +   
Sbjct: 9   LPDGVADVLPEQAQVVETLRREALDFLAVRGYQLVYTPFIEYIESLSSLSESNQDLDLVT 68

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D   G+ + +R D+T  +AR  A +   I    R    G V   +       R  +
Sbjct: 69  FKVIDQLSGRLLGVRADMTPQVARIDA-HVRPIEGVARYCYAGTVLHTKPQNFNATRAPL 127

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           Q   +  G  +  AD EM  +M   +E         H+ + +  +   ++++        
Sbjct: 128 QLGAELYGHDSIEADVEMIDVMLGLIEQAHTLEG-AHLDLGHVGLFRSLVKRA------- 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                        L+K     +  L          +FT+  ++ S+    +  + S    
Sbjct: 180 ------------GLNKNTENQLSDLYQRKALPELAEFTQDLSMGSD-FYALGRYASDLGA 226

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
              +   +++      +  F  L      ++   +++  I I    +R   Y+TG +Y  
Sbjct: 227 LKANLSQDIL-NDADFKAAFEALESTFTQIQS-KWSNLNIGIDVIELRSYHYHTGLMYAI 284

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                             +  GGRYDG+   F  ++ PATGFS             +   
Sbjct: 285 YAPNRAA----------PLAQGGRYDGIGEHFG-RSRPATGFSC------------DLYA 321

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               +   +        +D            R  G+R    LG  
Sbjct: 322 LGSTQFTEIETIVAPRGND--QNLLKAIADARHQGMRVVQLLGKD 364


>gi|83589892|ref|YP_429901.1| prolyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|114152213|sp|Q2RJN1|SYP_MOOTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83572806|gb|ABC19358.1| prolyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 573

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   IR   +  G   +  P+++ ++ L +     +   + +F L
Sbjct: 38  GIYTYLPLGRRVLAKIEQIIREEMDRAGGQEVVLPIIQPAE-LWQESGRWEVYGEEMFRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           QD   +   L     ++   L R    ++  +       +  
Sbjct: 97  QDRHRRQFCLGPTHEEIITALVRSEVTSYKQLPLLLYQIQNK 138



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 45/147 (30%), Gaps = 7/147 (4%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE----SSTNNIKEMGPVLITTMDHD 386
           G  Y     +     +   G  +  +   +  +  +        ++     V+I     D
Sbjct: 422 GANYTDARGQEHPIVMGCYGIGVSRTMAAIVEQCHDDQGIIWPLSVAPYQVVIIPASLKD 481

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGML 445
                  +   + L  AG+         +         AD    PL I  G    + G +
Sbjct: 482 DGQRQVAEGLYRELAAAGVEVVYDDRDERAGLK--FVEADLIGYPLRITVGKRTITSGTV 539

Query: 446 QIKDLAKGKELSREIKNNESWREARVA 472
            +K  ++ +E    ++   +  +A +A
Sbjct: 540 DVKWRSRKEETPLPLEGLSAQIQALLA 566


>gi|90408309|ref|ZP_01216474.1| prolyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310610|gb|EAS38730.1| prolyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 573

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 46/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   E  G   I  P+++ +D L       D+ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEMERAGAVEILMPVVQPAD-LWVETGRWDKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +  L+D   +   L     ++   L R    ++  +          +R     R   
Sbjct: 90  GGELLRLKDRHDRDFVLGPTHEEVVTELVRKEINSYKQLPLNLFQIQTKFRDETRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F               E     M        E +G
Sbjct: 150 MRSREFTMKDAYSFHLEDECLEKTYQTMFSAYCRIFERLG 189



 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +     N       V+I  M+           + Y   L+ AGI         +  G  
Sbjct: 463 DANGIIWNEALAPFSVVIVPMNMKKSHRVADLAERYYAELQAAGIEVLFDDRKER-PGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              A+    P  +I G      G+++ K+   G++   +I++  ++ + + +
Sbjct: 522 FADAELIGIPHMLIIGDRSIDNGVIEYKNRKSGEKQDVKIEDVIAFIKEQRS 573


>gi|256823089|ref|YP_003147052.1| prolyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796628|gb|ACV27284.1| prolyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 571

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R+  ++   +R      G   +  P ++ S+ L +     D+ 
Sbjct: 31  MIRKIASGMYTWLPTGLRVLRKVEAIVREEMNKAGAIEMLMPSVQPSE-LWEESGRWDQF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +   +D  G+   L     ++   + R    ++  +       +  
Sbjct: 90  GPELLRFKDRHGRDFCLGPTHEEIITAVIRDEINSYKQLPASFYQIQTK 138



 Score = 39.8 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 25/93 (26%), Gaps = 1/93 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M              Q L+  GI         +  G      +    P  ++      
Sbjct: 480 MNMHRSEQVQQIADKLYQDLQQQGIDVIFDDRKER-PGVMFSDMELIGVPHRLVVSERGL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             G ++ K+     +    ++N   + +  + Q
Sbjct: 539 ENGTIEYKNRQNTAKDDVSVENVVDYIKGLLQQ 571


>gi|289550945|ref|YP_003471849.1| Bacterial type prolyl-tRNA synthetase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658447|ref|ZP_07911319.1| proline--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180477|gb|ADC87722.1| Bacterial type prolyl-tRNA synthetase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315496776|gb|EFU85099.1| proline--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 566

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 73/545 (13%), Positives = 153/545 (28%), Gaps = 81/545 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   IR   E      I  P+L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNISKIIREEMERIDAVEILMPVLQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVF 115
                  +  L+D +G+  +L     ++   L R   +++  +          +R     
Sbjct: 86  WSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRDELKSYKRLPLTLFQIQSKFRDEKRP 145

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI--------------- 160
           R        F            +S +    +M        + VGI               
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDATYQDMYQAYGRIFKRVGINVRPVLADSGAIGGN 205

Query: 161 ---------KRNDYHIGINNRKILDGILEKIGLHGDDKLNER-------------LIVLR 198
                    K  +  I  +N       +EK  +    +  E                   
Sbjct: 206 HTHEFMALSKIGEDTIVYSNESDYAANIEKAEVVYQPQRQEESSADLTKIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELY 256
             D L       VK ++ +   +      +G +  ++    + S+   D  +     E+ 
Sbjct: 266 LADFLQLPLNAIVKSMIFKIDGEFVMILIRGHHELNDV--KLKSYFGTDAIEMATEDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           +++ I R         +
Sbjct: 324 NLVGAHPGSLGPIFDKDIKIIADNYVQDLTNLVIGANEDGYHYMNANIGRDFTVDDFGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVPAT------GFSIG 354
             IL   ++++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEMLSDGSGKAQFAEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           +SR + A+    +          +      LIT      +  S      + L   G+   
Sbjct: 444 VSRTLSAIVEQNNDDNGIIWPKTVTPFDLHLITVNPKKEEQQSLADNLYEQL--NGMFDV 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    P+ I+ G    + G++++K    G      ++  E + +
Sbjct: 502 LYDDRKERAGVKFNDADLIGLPIRIVVGKQ-AAEGIVEVKVRRTGTSEDVHVEQLEQYIK 560

Query: 469 ARVAQ 473
           A   +
Sbjct: 561 AIYNE 565


>gi|154148062|ref|YP_001406918.1| ATP phosphoribosyltransferase regulatory subunit [Campylobacter
           hominis ATCC BAA-381]
 gi|153804071|gb|ABS51078.1| tRNA synthetase, class II [Campylobacter hominis ATCC BAA-381]
          Length = 282

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 8/127 (6%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E+P G      K  +I+ +I ++   I    GF+ I TP   Y  +L          ++ 
Sbjct: 8   EIPDGSRLYFGKSAQIKRKIENTASEILLKNGFNEILTPYFSYHQNLS-------VNSEQ 60

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +    D     ISLR D T  + R +A          R + + P+F+       +    +
Sbjct: 61  LLKFSDPANNEISLRADSTVDVVR-IARRRIKNQNLKRWFYVQPIFKYPSAEFYQIGAEM 119

Query: 130 QCDVDNV 136
             + + +
Sbjct: 120 INEKNLM 126


>gi|260939872|ref|XP_002614236.1| hypothetical protein CLUG_05722 [Clavispora lusitaniae ATCC 42720]
 gi|238852130|gb|EEQ41594.1| hypothetical protein CLUG_05722 [Clavispora lusitaniae ATCC 42720]
          Length = 1653

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 72/508 (14%), Positives = 166/508 (32%), Gaps = 57/508 (11%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            +  I ++ L+ +  ++E +G        ++  D          +  + V+ + D +G  +
Sbjct: 1036 DYLILSQTLNELSRLFETHG-------AIQDFDGSALIPKSSTQSKEQVYEILDRNGSVL 1088

Query: 82   SLRYDLTAPLARYVAENFDTIVF--PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
            +L YDL  P+AR+++ N+  +             +    +        F           
Sbjct: 1089 TLSYDLVLPMARFLSRNYTEVSKLHRHEFVYRPNLRGIGRPDKYSAVAFDIFSHSTHFLK 1148

Query: 140  AETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
            +  A+  ++   +  T      K     I +N+  IL+  ++          +  L   R
Sbjct: 1149 SHDAECIKVVDEILCTFPCFKAKNAQAFIIVNHSDILNSAIDFAFGS-----SNTLSQSR 1203

Query: 199  AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
              + +      GV+    + +     +F     +  + ID+     +++ EK+  +L ++
Sbjct: 1204 RYELMGVLSQLGVERGSEDIKRYLRDEFKIQHTVVKDLIDLFN--FTVEPEKARLKLRKI 1261

Query: 259  VKGTI---AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
            +  +      E+  NEL  I ++++  G +S       +      Y    +++AI     
Sbjct: 1262 MVDSPLLAKVERALNELQEILDVLQSLGVSSTVSFCPLSNYNAKYYDGAFMFQAIYRIDK 1321

Query: 316  MNEKQKPVVFGSVGGGGRYDGLVSRFKG------QNVPATGFSIGISRLIVALKS----- 364
              +      F     GGRYD L+           +     GF +  + L + +K+     
Sbjct: 1322 NRK------FSRFVTGGRYDRLIDSLSNDGLTKSRTPHGVGFQLTSTLLFLLMKNAAKRS 1375

Query: 365  ----LESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFL-GSSKNFG 418
                  S T          +         +          L   GI ++ F   S++   
Sbjct: 1376 QLTLANSKTMGKWRKSRCDVLVTSSQESIIKDSGFKVLNELWAHGISSDWFFAKSNEELN 1435

Query: 419  NQLKYADRRNCPLAIIQGTGERSRGM---------LQIKDLAKGKELSREIKNNESWREA 469
            N    A    C   +         G          +++K +   K+   +      +   
Sbjct: 1436 N---RAIEDGCDWIVQLKQKNTGSGRRSKKSSFKPIRVKSIEANKDTDLDYDELLHFLLN 1492

Query: 470  RVAQITIPISELVSTV--KKILQENKEE 495
             + +     +E  S +  K+ L +  ++
Sbjct: 1493 EIEERNAEANEGSSYIDRKEDLSQTNDD 1520


>gi|269213497|ref|ZP_06158007.1| proline--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269146261|gb|EEZ72679.1| proline--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 594

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 71/566 (12%), Positives = 156/566 (27%), Gaps = 98/566 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 50  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 107

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 108 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 167

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +   ++     +   + 
Sbjct: 168 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLGLEFRPVAADTGSIG 227

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       + TK      + 
Sbjct: 228 GTGSHEFQVLAESGEDVIAYSDTSDYAANVELAPTLPLKGERAAAQV-ELTKVHTPNVKT 286

Query: 237 IDIMVSFLSIDLEKSMH---------------------ELYELVKGTIAGEKGFNELVVI 275
           ID +V+FLSI +EK++                      E  ++    +AG K    +   
Sbjct: 287 IDSLVNFLSIPIEKTLKSIVVEGENEGEIVLLLLRGDYEFNDIKAEKLAGVKSPLTMADP 346

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +  + G N   +       +   ++ T    + ++G    +       FG       +
Sbjct: 347 AAIRAQFGANGGSLGPVGFTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEF 406

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 407 VDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 466

Query: 352 SIGISRLIVALKSLESST---NNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A     +        K M P  +  +  +                 L  AG
Sbjct: 467 GIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAG 526

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
               +     +  G  L  ++    P  I+ G      G ++                  
Sbjct: 527 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNVE-----------------Y 568

Query: 465 SWREARVAQITIPISELVSTVKKILQ 490
           + R    AQ ++PI E+V+ V   L 
Sbjct: 569 AERRDNEAQ-SVPIGEIVARVTDSLN 593


>gi|241760072|ref|ZP_04758170.1| proline--tRNA ligase [Neisseria flavescens SK114]
 gi|241319526|gb|EER55956.1| proline--tRNA ligase [Neisseria flavescens SK114]
          Length = 595

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 69/568 (12%), Positives = 155/568 (27%), Gaps = 100/568 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 51  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENIVREEMARAGSVELLMPVVQPAE-LWQES 108

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 109 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEV 168

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +    +     +   + 
Sbjct: 169 RPRFGVMRAREFVMKDAYSFHADYASLQTTYQNMYDAYCRIFTRLGLKFRPVAADTGSIG 228

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       + TK      + 
Sbjct: 229 GTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAA-AQAELTKVHTPNVKT 287

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           I+ +V FL+I +E+++                     HE  ++    +AG K    +   
Sbjct: 288 IESLVEFLNIPVEQTLKSIVVEGENEGELILLLLRGDHEFNDIKAEKLAGVKSPLTMASP 347

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +V + G N   +   +   +   ++ T    + ++G    +       FG       +
Sbjct: 348 AAIVEQFGANGGSLGPVNFKGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEF 407

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 408 VDLRNVIEGDISPDEQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 467

Query: 352 SIGISRLIVALKSLESSTN---NIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A     +        K M P  +  +  +                 L  AG
Sbjct: 468 GIGITRVVAAAIEQNNDEKGIVWTKAMAPFEVVIVPMNYKKSEAVREAADKIYAELLAAG 527

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
               +     +  G  L  ++    P  I+ G      G +                   
Sbjct: 528 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNV------------------- 567

Query: 465 SWREARVAQ-ITIPISELVSTVKKILQE 491
            + E R  Q   + +SE+V+ V   L  
Sbjct: 568 EYAERRDNQAQAVAVSEVVAKVLTALNA 595


>gi|254805135|ref|YP_003083356.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668677|emb|CBA06388.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 570

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 68/566 (12%), Positives = 150/566 (26%), Gaps = 98/566 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +    +     +   + 
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLGLAFRPVAADTGSIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       + TK      + 
Sbjct: 204 GTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERTA-AQAELTKVHTPNVKT 262

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           I+ +V FL+I +E+++                     HE  ++    +AG K    +   
Sbjct: 263 IESLVEFLNIPVEQTLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASP 322

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +V + G N   +       +   ++ T    + ++G            FG       +
Sbjct: 323 AAIVEQFGANGGSLGPVGFAGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEF 382

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 383 VDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 442

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M P  +  +  +                 L  AG
Sbjct: 443 GIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAG 502

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
               +     +  G  L  ++    P  I+ G      G +                  E
Sbjct: 503 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNV------------------E 543

Query: 465 SWREARVAQITIPISELVSTVKKILQ 490
                      + I E+V+ V  +L 
Sbjct: 544 YAERRNNEAQAVAIGEIVARVTALLN 569


>gi|85859447|ref|YP_461649.1| prolyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722538|gb|ABC77481.1| prolyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 597

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/266 (11%), Positives = 72/266 (27%), Gaps = 10/266 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   IR      G   +  P+++ ++ L +     +  
Sbjct: 50  MIRKLSAGIYSYLPLGYRVLRKVEQIIREEMNRAGAQEVYLPMVQPAE-LWQESGRWEHY 108

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +   +D   +   L     ++   L R+  + +  +       +         R   
Sbjct: 109 GKELLRFRDRHDREYCLGPTHEEVITDLVRHEIKTYRQLPKNLYQIQTKFRDEIRPRFGV 168

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D     AE +  +M           G++                  
Sbjct: 169 MRGREFGMKDAYSFDADEEGAEISYQKMFEAYKRIFARCGLRFRPVEADSGTIGG--SFS 226

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +  +  D   +  +         +    +       E   D     T+     +  ID 
Sbjct: 227 HEFMVMADSGEDGLVFCATCSYAANLEKAEVHPPEKMEISNDEMLLLTEVHTPNARTIDE 286

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAG 265
           + +FL++  ++ +  L     G    
Sbjct: 287 VCAFLNVTPQEIVKTLIFNADGNPVA 312



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 4/104 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGS-SKNFGNQ 420
                          V+IT ++ +  +L++  +   + L  AG  AE+ L    +  G +
Sbjct: 478 DENGIVWPMPISPYQVIITPVNMNDKALAETAERLYESL--AGKGAEVLLDDRDERAGVK 535

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            K AD    P+ +  G  + + G ++++    G+    ++ + E
Sbjct: 536 FKDADLIGIPIRVTVGPKKLAEGKVEVRLRDTGETSDVQVDSVE 579


>gi|229583844|ref|YP_002842345.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|259516679|sp|C3N1B5|SYT_SULIA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|228018893|gb|ACP54300.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|323476419|gb|ADX81657.1| threonyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 545

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/450 (12%), Positives = 120/450 (26%), Gaps = 39/450 (8%)

Query: 42  FDPIETPLLEYSDSLGKFL------PDED---RPNK-GVFSLQDDDGQWISLRYDLTAPL 91
           +  I     E  + L  +L       + D      K  +FS  ++ G  + L        
Sbjct: 111 YVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVL-------- 162

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
                                  F  E         + +    +V  +     +    + 
Sbjct: 163 ---------FHPKGQTIRNELIAFMREI---NDSMGYQEVYTSHVFKTDIWKISGHYTLY 210

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
            D L    ++ ++Y +   N      I +       D                K  L G+
Sbjct: 211 RDKLIVFNMEGDEYGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGL 270

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAGEKGF 269
             + G    D+   F +   L  E   ++   + +  +      ++   +        G 
Sbjct: 271 LRVRG-FVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGS 329

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFG 326
           +EL   +     S    + +K       G  Y     +E         +           
Sbjct: 330 DELWEKATNALISALQESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLP 389

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                   D    + +   V    +      + + L+  +           V +  +   
Sbjct: 390 ERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSS--VQVRVLPIT 447

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +     +     +R   IRAE+   + +    ++K A  +  P  +I G  E S G + 
Sbjct: 448 DEVNEYAEKVLNDMRKRRIRAEIDY-AGETLSKRIKNAYDQGVPYILIVGKKEASEGTVT 506

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITI 476
           ++     +  + + +         +AQ  +
Sbjct: 507 VRARGNIEVRNVKFEKFLELLITEIAQRDV 536


>gi|227829326|ref|YP_002831105.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|259516733|sp|C3MKT5|SYT_SULIL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227455773|gb|ACP34460.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
          Length = 545

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/450 (12%), Positives = 120/450 (26%), Gaps = 39/450 (8%)

Query: 42  FDPIETPLLEYSDSLGKFL------PDED---RPNK-GVFSLQDDDGQWISLRYDLTAPL 91
           +  I     E  + L  +L       + D      K  +FS  ++ G  + L        
Sbjct: 111 YVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVL-------- 162

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
                                  F  E         + +    +V  +     +    + 
Sbjct: 163 ---------FHPKGQTIRNELIAFMREI---NDSMGYQEVYTSHVFKTDIWKISGHYTLY 210

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
            D L    ++ ++Y +   N      I +       D                K  L G+
Sbjct: 211 RDKLIVFNMEGDEYGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGL 270

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAGEKGF 269
             + G    D+   F +   L  E   ++   + +  +      ++   +        G 
Sbjct: 271 LRVRG-FVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGS 329

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFG 326
           +EL   +     S    + +K       G  Y     +E         +           
Sbjct: 330 DELWEKATNALISALQESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLP 389

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                   D    + +   V    +      + + L+  +           V +  +   
Sbjct: 390 ERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSS--VQVRVLPIT 447

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +     +     +R   IRAE+   + +    ++K A  +  P  +I G  E S G + 
Sbjct: 448 DEVNEYAEKVLNDMRKRRIRAEIDY-AGETLSKRIKNAYDQGVPYILIVGKKEASEGTVT 506

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITI 476
           ++     +  + + +         +AQ  +
Sbjct: 507 VRARGNIEVRNVKFEKFLELLITEIAQRDV 536


>gi|15899227|ref|NP_343832.1| threonyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|229578099|ref|YP_002836497.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229583311|ref|YP_002841710.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|22654132|sp|Q97VW8|SYT_SULSO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516740|sp|C3NMY1|SYT_SULIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516744|sp|C3N9B3|SYT_SULIY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13815789|gb|AAK42622.1| Threonyl-tRNA synthetase (thrS) [Sulfolobus solfataricus P2]
 gi|228008813|gb|ACP44575.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228014027|gb|ACP49788.1| threonyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 545

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/450 (12%), Positives = 120/450 (26%), Gaps = 39/450 (8%)

Query: 42  FDPIETPLLEYSDSLGKFL------PDED---RPNK-GVFSLQDDDGQWISLRYDLTAPL 91
           +  I     E  + L  +L       + D      K  +FS  ++ G  + L        
Sbjct: 111 YVRIRGVAFETEEQLKDYLSWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVL-------- 162

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
                                  F  E         + +    +V  +     +    + 
Sbjct: 163 ---------FHPKGQTIRNELIAFMREI---NDSMGYQEVYTSHVFKTDIWKISGHYTLY 210

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
            D L    ++ ++Y +   N      I +       D                K  L G+
Sbjct: 211 RDKLIVFNMEGDEYGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGL 270

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAGEKGF 269
             + G    D+   F +   L  E   ++   + +  +      ++   +        G 
Sbjct: 271 LRVRG-FVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGS 329

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFG 326
           +EL   +     S    + +K       G  Y     +E         +           
Sbjct: 330 DELWEKATNALISALQESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLP 389

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                   D    + +   V    +      + + L+  +           V +  +   
Sbjct: 390 ERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSS--VQVRVLPIT 447

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +     +     +R   IRAE+   + +    ++K A  +  P  +I G  E S G + 
Sbjct: 448 DEVNEYAEKVLNDMRKRRIRAEIDY-AGETLSKRIKNAYDQGVPYILIVGKKEASEGTVT 506

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITI 476
           ++     +  + + +         +AQ  +
Sbjct: 507 VRARGNIEVRNVKFEKFLELLITEIAQRDV 536


>gi|305663857|ref|YP_003860145.1| threonyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378426|gb|ADM28265.1| threonyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 617

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 38/110 (34%), Gaps = 1/110 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +S          + P+ +  +    ++L+      + L   GIR ++     ++ G +++
Sbjct: 481 ESENKPPTLPLWLSPIQVRVIPISKETLTYAINVAKELSRHGIRVDID-DRDESLGKKIR 539

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A     P  I+ G  E   G + ++    G +    I          + 
Sbjct: 540 DAGIEWIPYVIVIGEREMKTGTINVRIRKDGIQRVMHIDEFIKLINEELN 589


>gi|284799796|ref|ZP_05984887.2| proline--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796829|gb|EFC52176.1| proline--tRNA ligase [Neisseria subflava NJ9703]
          Length = 595

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 68/568 (11%), Positives = 156/568 (27%), Gaps = 100/568 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 51  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENIVREEMARAGSVELLMPVVQPAE-LWQES 108

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 109 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEV 168

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +   ++     +   + 
Sbjct: 169 RPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDAYCRIFTRLGLEFRPVAADTGSIG 228

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       + TK      + 
Sbjct: 229 GTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAA-AQAELTKVHTPNVKT 287

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           I+ +V FL+I +E+++                     HE  ++    +AG K    +   
Sbjct: 288 IESLVEFLNIPVEQTLKSIVVEGENEGELVLLLLRGDHEFNDIKAEKLAGVKSPLTMASP 347

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + ++ + G N   +   +   +   ++ T    + ++G    +       FG       +
Sbjct: 348 AAIIEQFGANGGSLGPVNFKGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEF 407

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 408 VDLRNVIEGDISPDEQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 467

Query: 352 SIGISRLIVALKSLESSTN---NIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A     +        K M P  +  +  +                 L  AG
Sbjct: 468 GIGITRVVAAAIEQNNDEKGIVWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAG 527

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
               +     +  G  L  ++    P  I+ G      G +                   
Sbjct: 528 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNV------------------- 567

Query: 465 SWREARVAQ-ITIPISELVSTVKKILQE 491
            + E R  Q   + +SE+V+ V   L  
Sbjct: 568 EYAERRNNQAQAVAVSEVVAKVLAALNA 595


>gi|15677205|ref|NP_274358.1| prolyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|81857571|sp|Q9JZ14|SYP_NEIMB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|7226583|gb|AAF41714.1| prolyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325134423|gb|EGC57068.1| prolyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325200038|gb|ADY95493.1| prolyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 570

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 67/525 (12%), Positives = 144/525 (27%), Gaps = 86/525 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      F            +S +T   +M          +G+    +     +  
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDAYCRIFTRLGLA---FRPVAADTG 200

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            + G          +   + +      D      L     L GE       +  K     
Sbjct: 201 SIGGTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAA-AQAELVKVHTPN 259

Query: 234 SEQIDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNEL 272
            + ID +V FLSI +EK++                     HE  ++    +AG K    +
Sbjct: 260 VKTIDSLVDFLSIPIEKTLKSIVVEGENEGELILLLLRGDHEFNDIKAEKLAGVKSPLTM 319

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
              + +V + G N   +       +   ++ T    + ++G    +       FG     
Sbjct: 320 ASPAAIVEQFGANGGSLGPVGFAGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAE 379

Query: 332 GRYDGLVSRFKGQNVP-------------------------------------------A 348
             +  L +  +G   P                                            
Sbjct: 380 PEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEM 439

Query: 349 TGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLR 401
             + IGI+R++ A       E      K M P  +  +  +                 L 
Sbjct: 440 GCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELL 499

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            AG    +     +  G  L  ++    P  I+ G      G ++
Sbjct: 500 AAGADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNVE 543


>gi|284996685|ref|YP_003418452.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284444580|gb|ADB86082.1| threonyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 545

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/450 (12%), Positives = 120/450 (26%), Gaps = 39/450 (8%)

Query: 42  FDPIETPLLEYSDSLGKFL------PDED---RPNK-GVFSLQDDDGQWISLRYDLTAPL 91
           +  I     E  + L  +L       + D      K  +FS  ++ G  + L        
Sbjct: 111 YVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVL-------- 162

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
                                  F  E         + +    +V  +     +    + 
Sbjct: 163 ---------FHPKGQTIRNELIAFMREI---NDSMGYQEVYTSHVFKTDIWKISGHYTLY 210

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
            D L    ++ ++Y +   N      I +       D                K  L G+
Sbjct: 211 RDKLIVFNMEGDEYGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGL 270

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAGEKGF 269
             + G    D+   F +   L  E   ++   + +  +      ++   +        G 
Sbjct: 271 LRVRG-FVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGS 329

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFG 326
           +EL   +     S    + +K       G  Y     +E         +           
Sbjct: 330 DELWEKATNALISALQESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLP 389

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                   D    + +   V    +      + + L+  +           V +  +   
Sbjct: 390 ERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAIILEHFKGKLPTWLSS--VQVRVLPIT 447

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +     +     +R   IRAE+   + +    ++K A  +  P  +I G  E S G + 
Sbjct: 448 DEVNEYAEKVLNDMRKRRIRAEIDY-AGETLSKRIKNAYDQGVPYILIVGKKEASEGTVT 506

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITI 476
           ++     +  + + +         +AQ  +
Sbjct: 507 VRARGNIEVRNVKFEKFLELLITEIAQRDV 536


>gi|237739058|ref|ZP_04569539.1| prolyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423658|gb|EEO38705.1| prolyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 567

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + IR   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIRKIENIIREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GAEMLRLKDRHERDFVLSPTQEEMITSIVRSDISSYKSLP--LNLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GLMRGREFTM 157



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 106/334 (31%), Gaps = 32/334 (9%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +   ++ + + + +  +  +          D++    ++G    + E +  N  + 
Sbjct: 254 VHTPDCPTIESLAKYLDIPLERTVKALTYKDMGTDEIYMVLIRG-DFEVNEVKLKNILNA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMATDEEIEKIGLTKGYIGPYKLPAEIKIVAD-LSVIEVTNHVVGSHQKDYHYKNVN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-K 342
           Y  +        +R +     C+    L      E  +    G           +    K
Sbjct: 372 YGRDYKADIVADIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDENGK 431

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD------HDSDSLSKYQMY 396
            Q +    + IG++R + A     +  N I     +    +D       +   +S  +  
Sbjct: 432 TQYMLMGCYGIGVTRTMAAAIEQNNDENGIIWPVSIAPYIVDVIPANIKNEGQVSLAEKI 491

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L+   I   +     +  G + K AD    P  ++ G      G++++K    G+  
Sbjct: 492 YNELQAEDIDVMLD-DRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVEVKIRKTGE-- 547

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                            + +  SE+V+ +K++++
Sbjct: 548 ----------------TLEVSESEVVAKIKELMK 565


>gi|294783936|ref|ZP_06749258.1| proline--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479748|gb|EFG27527.1| proline--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 567

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + IR   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIRKIENIIREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GAEMLRLKDRHERDFVLSPTQEEMITSIVRSDISSYKSLP--LNLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GLMRGREFTM 157



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 105/334 (31%), Gaps = 32/334 (9%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +   ++ + + + +  +  +          D++    ++G    + E +  N    
Sbjct: 254 VHTPDCPTIESLAKYLDIPLERTVKALTYKDMGTDEIYMVLIRG-DFEVNEVKLKNILKA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMATDEEIEKIGLTKGYIGPYKLPTEIKIVAD-LSVIEVTNHVVGSHQKDYHYKNVN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-K 342
           Y  +        +R +     C+    L      E  +    G           +    K
Sbjct: 372 YGRDYKADIVADIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDENGK 431

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD------HDSDSLSKYQMY 396
            Q +    + IG++R + A     +  N I     +    +D       +   +S  +  
Sbjct: 432 TQYMLMGCYGIGVTRTMAAAIEQNNDENGIIWPVSIAPYIVDVIPANIKNEGQVSLAEKI 491

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L+   I   +     +  G + K AD    P  ++ G      G++++K    G+  
Sbjct: 492 YNELQAEDIDVMLD-DRDEKPGFKFKDADLIGFPFKVVVGKR-VDEGIVEVKIRRTGE-- 547

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                            + +  SE+V+ +K++++
Sbjct: 548 ----------------TLEVSESEVVAKIKELMK 565


>gi|227497547|ref|ZP_03927775.1| proline--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226833001|gb|EEH65384.1| proline--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 614

 Score = 71.8 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 35/117 (29%), Gaps = 4/117 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D    +      + L  AG+  E+     +     +K
Sbjct: 493 DERGLAWPIQVAPYHVQVLATGKDEQVFATAHALARELDAAGL--EVLYDDRRKVSAGVK 550

Query: 423 YADR--RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           +AD      P  ++ G      G ++I+D   G+  S       +   A V    + 
Sbjct: 551 FADSELLGVPFTVVVGRDLAKEGTVEIRDRRSGERRSVPAATAAAEVRATVEAALVA 607



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
               G        + +  +I   +R      G   +  P L  ++   K     D     
Sbjct: 36  RTAPGIYTWLPLGLAVVRKIEAIVREEMNRMGGQEVHFPALLPAEPY-KATQRWDEYGPT 94

Query: 70  VFSLQDDDGQWISLRY 85
           +F+LQD  G    L  
Sbjct: 95  LFTLQDRKGGDYLLAP 110


>gi|323473769|gb|ADX84375.1| threonyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 545

 Score = 71.4 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/450 (12%), Positives = 120/450 (26%), Gaps = 39/450 (8%)

Query: 42  FDPIETPLLEYSDSLGKFL------PDED---RPNK-GVFSLQDDDGQWISLRYDLTAPL 91
           +  I     E  + L  +L       + D      K  +FS  ++ G  + L        
Sbjct: 111 YVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVL-------- 162

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
                                  F  E         + +    +V  +     +    + 
Sbjct: 163 ---------FHPKGQTIRNELIAFMREI---NDSMGYQEVYTSHVFKTDIWKISGHYTLY 210

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
            D L    ++ ++Y +   N      I +       D                K  L G+
Sbjct: 211 RDKLIVFNMEGDEYGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGL 270

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAGEKGF 269
             + G    D+   F +   L  E   ++   + +  +      ++   +        G 
Sbjct: 271 LRVRG-FVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGS 329

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFG 326
           +EL   +     S    + +K       G  Y     +E         +           
Sbjct: 330 DELWEKATNALISALQESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLP 389

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                   D    + +   V    +      + + L+  +           V +  +   
Sbjct: 390 ERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSS--VQVRVLPIT 447

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +     +     +R   IRAE+   + +    ++K A  +  P  +I G  E S G + 
Sbjct: 448 DEVNEYAEKVLNDMRKRRIRAEIDY-AGETLSKRIKNAYDQGVPYILIVGKKEASEGTVT 506

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITI 476
           ++     +  + + +         +AQ  +
Sbjct: 507 VRARGNIEVRNVKFEKFLELLITEIAQRDV 536


>gi|84683478|ref|ZP_01011381.1| ATP phosphoribosyltransferase regulatory subunit [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84668221|gb|EAQ14688.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacterales
           bacterium HTCC2654]
          Length = 364

 Score = 71.4 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 103/356 (28%), Gaps = 38/356 (10%)

Query: 32  SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL 91
            +  ++E  G   +ETP+L+ +++L     ++ R     +   D       LR D T P+
Sbjct: 16  RLLALFEGQGAQVVETPILQPAETLLDLYGEDIRARA--YVTSDPMMGEAMLRPDFTVPV 73

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
              V  +      P R    G VFR ++  P R  +++Q   +    +   A       +
Sbjct: 74  ---VQMHMAEGAEPARYTYAGEVFRKQEDDPHRAPEYMQVGYEVFDRANPAASDAEVFSV 130

Query: 152 ADTL----------EAVGIKRNDYHIGINNRKILDGILEKIGLH-----------GDDKL 190
              +            +GI            +  + +L  +              G  + 
Sbjct: 131 FSDILAPQGLRAATGDLGILLAAVRGLTTTERRRNALLRHLWRPRRFRALLDRFSGRAQN 190

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF---TKGANLTSEQIDIMVSFLSID 247
            E    L A D  +      + L   +   +             +   ++ ++   LS+ 
Sbjct: 191 PEGRKALAAGDPFEGMDAPVIGLRSRDEIEERIAALREDMTTPPIPESEVALLNDLLSMR 250

Query: 248 --LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
             +      L +L     +            + +   G +   +    +  R        
Sbjct: 251 ETMTNVCENLRDLAVDMPSIMGAVERFSARCKALEARGVDVENLDFEGSFGR-------T 303

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
             E   GF              V  GGRYD L       +       +    L++A
Sbjct: 304 TLEYYDGFVFGFYAASRPDLPPVATGGRYDALTRVLGRGSEIPAVGGVIRPELLLA 359


>gi|49474193|ref|YP_032235.1| prolyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81827622|sp|Q6FZX5|SYP_BARQU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49239697|emb|CAF26072.1| Prolyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 441

 Score = 71.4 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 59/471 (12%), Positives = 124/471 (26%), Gaps = 70/471 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G         ++ +++   IR   E  G   I  P ++ +D L +  
Sbjct: 26  MLRAGMIRQQT-SGIYSWLPLGKKVLDKVCKIIREEQERAGAVEILMPTVQSAD-LWRES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP---- 113
              D     +  ++D   + +       ++   + R    ++  +       +       
Sbjct: 84  GRYDDYGLEMLRIKDRQKRDLLYGPTNEEMVTDIFRSYVHSYKDLPLNLYHIQWKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
             R        F        D     ++T+   M +    T   +G+K            
Sbjct: 144 RPRFGVMRSREFLMKDAYSFDLDYEGSKTSYNRMFVAYLRTFSCLGLKAIPMRADTGPIG 203

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                          +L+   I+L    +   F  +    L     + +  D    AN+ 
Sbjct: 204 G--------------ELSHEFIILAETGESAIFCDKKFFELTVPHSSIDFSDKAVLANI- 248

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
                                    VK   +      E+    E  + S  +        
Sbjct: 249 -------------------------VKQWTSFYAATEEMHNEEEWAKVSDND-------R 276

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
              RG+E      +      P+  +                DG        +       +
Sbjct: 277 LSARGIEVGHIFHFGTKYSAPMGAKVMGQ------------DGKEHLVSMGSYGIGPSRL 324

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
             + +  +                  I  M  +D       +     L  AG    +   
Sbjct: 325 VAAVIEASHDENGIIWPKSIAPFDFGIINMKPNDEKCTRACETLYSGLMQAGFDPLLDDR 384

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           + +  G++    D    P  II G    ++  ++IKD   G + S  ++N 
Sbjct: 385 NER-PGSKFATMDLIGLPTQIIVGPKSIAQNEVEIKDRKTGVKKSLTVENV 434


>gi|261344716|ref|ZP_05972360.1| hypothetical protein PROVRUST_05973 [Providencia rustigianii DSM
           4541]
 gi|282567158|gb|EFB72693.1| proline--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 576

 Score = 71.4 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 48/161 (29%), Gaps = 8/161 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  D     +R+  ++ + +R   EN G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYDWLPTGVRVLRKVENIVREEMENAGAIEVSLPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +    D   +   L     ++   L R    ++  +          +R     R   
Sbjct: 90  GPELLRFVDRGERPFVLGPTHEEVITDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
                F             S +     M    +     +G 
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDAMYEAYSKIFTRIGF 190



 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  ++      V I  M+       K   +     L+  GI         +  G  
Sbjct: 461 DDRGIIWSDAIAPFQVAILPMNMHKSYRVKEVAEKLYADLKAQGIDVIFDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K      +    + N  S+ + ++A
Sbjct: 520 FADMELIGVPYTIVIGDRNLDTNQVEYKSRRSDDKALVGLDNVVSFLKEKLA 571


>gi|313668476|ref|YP_004048760.1| prolyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005938|emb|CBN87395.1| prolyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 570

 Score = 71.4 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 73/570 (12%), Positives = 152/570 (26%), Gaps = 104/570 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      F            +S +T   +M          +G+    +     +  
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDAYCRIFTRLGLA---FRPVAADTG 200

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            + G          +   + +      D      L     L GE       +  K     
Sbjct: 201 SIGGTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAA-AQAELVKVHTPN 259

Query: 234 SEQIDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNEL 272
            + ID +V FLSI +EK++                     HE  ++    +AG K    +
Sbjct: 260 VKTIDSLVDFLSIPIEKTLKSIVVEGENEGELILLLLRGDHEFNDIKAEKLAGVKSPLTM 319

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
              + +V + G N   +       +   ++ T    + ++G    +       FG     
Sbjct: 320 ASPAAIVEQFGANGGSLGPVGFAGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAE 379

Query: 332 GRYDGLVSRFKGQNVP-------------------------------------------A 348
             +  L +  +G   P                                            
Sbjct: 380 PEFVDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEM 439

Query: 349 TGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLR 401
             + IGI+R++ A       E      K M P  +  +  +                 L 
Sbjct: 440 GCYGIGITRVVAAAIEQNNDEKGIIWAKAMAPFEVVIVPMNYKKSDTVREAADKIYAELL 499

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AG    +     +  G  L  ++    P  I+ G      G +                
Sbjct: 500 AAGADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNV---------------- 542

Query: 462 NNESWREARVAQITIPISELVSTVKKILQE 491
             E           + I E+V+ V   L  
Sbjct: 543 --EYAERRENEAQAVAIGEIVARVTASLNA 570


>gi|156081708|ref|XP_001608347.1| histidyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148800918|gb|EDL42323.1| histidyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 620

 Score = 71.4 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 29/89 (32%), Gaps = 7/89 (7%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
              +  +  RG      ++   R  I  +   + + + F   + P+LE      +     
Sbjct: 58  NKNISLKSVRGIRTFNPRDYARREYIFKTWEEVAKAFSFSFYDLPVLEDYHIFQRS---- 113

Query: 64  DRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
                  +     + + + LR ++T  L 
Sbjct: 114 --KINEAYDFV-KNKRHLILRPEITPQLV 139



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 63/412 (15%), Positives = 133/412 (32%), Gaps = 51/412 (12%)

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
           AR        +    +   IG  FR E+    R R+  Q ++D +G+    AD E+   +
Sbjct: 211 ARVKPYRLHNLRRVHKMSTIGQCFRYERTTSCRKREHYQWNMDVIGTDLIDADVEILTAL 270

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
                 V +  +D  I IN+++++  I++KI      +  +  I   A+          V
Sbjct: 271 LSFFRRVHLLPSDVVIKINDKRVVIQIIKKIFKSSLREFPQPYIQHHAVPN--------V 322

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDI--MVSFLSIDLEKSMHELYELVKGTIAGEKGF 269
             +L + +  +SG F          +    +V F ++  +        +   +   +   
Sbjct: 323 LQILDKHKKISSGTFKLLLQRKVPYLHRHEVVRFFNVIWKVKNLPDLFIFFNSPE-QNIL 381

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP-------------VM 316
           ++L  +     +    S   ++  T+VRG++YYT  ++E+                  V+
Sbjct: 382 SDLHTVLRYFGEMNLQS-FFEVDLTVVRGMDYYTNIIFESFYRHKKYRAICGGGRYSYVL 440

Query: 317 NEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI---------GISRLIVALKSLES 367
           NE Q+    G   G      ++   + +    +   +          +S      +    
Sbjct: 441 NEGQRVCAVGFGMGDVVITEILFNSQVRRGRGSEGDLPDELSRNVDVVSFFPPLAQRQGE 500

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQM------YTQMLRTAGIRA--------EMFLGS 413
              + +        +         +  +          LR  G R             G+
Sbjct: 501 RQVHRQSECQAECQSWQKQVGHPPRGLIQREHFHIVDTLRGNGARVYSLLQGGSGGNRGN 560

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             +    LK A+       +         G+  +KDL  G + +    +  S
Sbjct: 561 RGSLSKALKKANALRANFFLFFDE---HIGVFFLKDLRTGGQRAVTSADVLS 609


>gi|321265183|ref|XP_003197308.1| translational activator protein kinase Gcn2 [Cryptococcus gattii
            WM276]
 gi|317463787|gb|ADV25521.1| Translational activator protein kinase Gcn2, putative [Cryptococcus
            gattii WM276]
          Length = 1447

 Score = 71.4 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 58/472 (12%), Positives = 132/472 (27%), Gaps = 35/472 (7%)

Query: 29   ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
            ++  + ++++ +G      PLL    +L    P+ D        L +  GQ + L     
Sbjct: 952  VIQRLVDLFQRHGAVETYLPLLIPETTLLDAFPNLDPV-----RLIEKSGQVVQLPRSSV 1006

Query: 89   APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
              + R         +      R     +                     ++AE    E+ 
Sbjct: 1007 LAMGRSATRRQIERIKRYHVGRKYTEHQLGGQPVVSGELSFDIVSPIHSAAAEAECLEVV 1066

Query: 149  MMMADTLEAV-GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFG 207
              +      + G    +Y   +++  +LD IL  I    D    + L   R         
Sbjct: 1067 DKVISEFRGMRGTSSVEYEFHVSHETVLDAILSIIPDRPDKPRLKVLEQFR--------- 1117

Query: 208  LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL----EKSMHELYELVKGTI 263
                        T +    +  A L+   +D +             K +  ++ L     
Sbjct: 1118 -NLGASNSANPSTQSRNLLSNIAGLSRMLMDELEQCCITGDFEVVRKRLESIFTLAGAKR 1176

Query: 264  AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN------ 317
                  +++  +    R  G +   +   +       +  G ++E +      +      
Sbjct: 1177 KLAIALDDMANVINSARACGVSRKILFRPTLAKHSEFFRGGFMFECVKKGKQKDVVAYGG 1236

Query: 318  ------EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                  E  K     S        G+           + +   +SR ++   + +  +  
Sbjct: 1237 RYDSLLEHFKQPAMHSQSRRVFGVGMSIAVDQLARIVSRYESSLSRRLMEKPNEDERSFG 1296

Query: 372  IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                    +         L+        L  AGIRA+      ++     +    +N   
Sbjct: 1297 YWSPARCDVYVASFPQVDLAHRLQIIGELWRAGIRADFQYDDGRSLEEVTQECQDQNILY 1356

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
             +I      SR  ++I+ + +  E+               A+ +IP ++  +
Sbjct: 1357 LVIPK---ASRSTIKIRSILRRSEVEVISDQRRIDASYATAEGSIPSAQAAA 1405


>gi|315499825|ref|YP_004088628.1| prolyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315417837|gb|ADU14477.1| prolyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 439

 Score = 71.4 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/462 (11%), Positives = 110/462 (23%), Gaps = 62/462 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  +I   +    +  G   +  P L+ +D L +     D  
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLRKIEKIVHEEMQRAGAVELLMPTLQLAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +            LR                          I      E        
Sbjct: 90  GQEM------------LR--------------------------IKDRHEREMLYGPTNE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + I         S +     +  +     +    +           K             
Sbjct: 112 EMITEIFRGTVKSYKDLPMNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEASAR 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI---DIMVSF 243
                  +  L    +L    +  ++   G    D S +F   A      +     +V  
Sbjct: 172 KAYNRMFIAYLNTFSRLGLKAV-PMRADTGPIGGDLSHEFIILAETGESAVFCHKDLVDM 230

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            +   +    +L  LV    +      E+   +                   V   +  +
Sbjct: 231 PAPGADVDWDDLQGLVDQRTSLYAATEEMHDEAAF---------------NAVPADKQLS 275

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
               E    F    +   P+     G  G    +     G  V      I  +      +
Sbjct: 276 ARGIEVGHIFYFGEKYSAPMGAKVSGADGSQVNVHMGSYGVGVSRLIGGIIEASHD---E 332

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +      ++      L+     D    +  +   + L+ AG    ++  +    G +   
Sbjct: 333 AGIIWPESVTPFDVALVNLRVGDEACDAACEKAYKALKAAGRDV-LYHDTDDRPGAKFAS 391

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            D    P  +I G    + G ++IK  A G+  +        
Sbjct: 392 MDLIGIPWQLIIGPKGIAEGQVEIKHRATGERHTAAFDAVLE 433


>gi|48477666|ref|YP_023372.1| threonyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48430314|gb|AAT43179.1| threonyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 710

 Score = 71.4 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/478 (10%), Positives = 120/478 (25%), Gaps = 68/478 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IRN ++  +  I     +  + T  + + D + K     D+    +F  
Sbjct: 294 GMPFYTPNGAVIRNELIKYMGEINARNNWQEVWTAHV-FRDLIWKQSGHYDKYKNDMFLF 352

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q ++G+   L+                        ++ G     +               
Sbjct: 353 QLENGEHYGLKP--------------MNCPGHITIFQRGIYSYRDMPVK----------- 387

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                       E    M       G   +D H  +   +IL+ +   +G+  +      
Sbjct: 388 --YCEPGTVYRYEKSGEMGGLTRPRGFTIDDGHGFLRQDQILEEVSSLLGMIHEVFNTIL 445

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
             V  + D            L+     +    F   A  +  +        S DLE    
Sbjct: 446 GNVEFSFDLSVMDKNSPENYLIEYKCRNCGNVFMLRAGSSKIECPKCS---SKDLEMDFS 502

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                 +      +  N                  + +   + R  +  T          
Sbjct: 503 MWDAATENLRKALESRNLNYKEYPGEAAFYGPKIDVHVKDALNRFWQLST---------- 552

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  +   P+ F         +    + +   +    +      + + L+          
Sbjct: 553 -IQLDFFMPINFDLYY----INSDGKKERPVIIHRAIYGSYERFIAILLEHYNGKLPTWL 607

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +  +    +     +    +     IR+++ L SS+    ++K   +      I
Sbjct: 608 SPIQSYVIPVS--ENYNEYAESINSLFVKNNIRSKIDL-SSETISKKIKMIRKMRPSYII 664

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           + G  E     + I++                        I +P++E +  +K  +  
Sbjct: 665 VVGEKEEHNKSVSIRNRKDKT-------------------IEMPVNEFIEKIKDEISS 703


>gi|324500425|gb|ADY40201.1| Eukaryotic translation initiation factor 2-alpha kinase 4 [Ascaris
            suum]
          Length = 1569

 Score = 71.4 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 64/449 (14%), Positives = 151/449 (33%), Gaps = 29/449 (6%)

Query: 8    RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
            R  LPR         +R    I + +  +   + F P  T  +    S  + +    +  
Sbjct: 969  RLSLPR---------LRTIEYICEELSRLCALHAFIPFATHSVAPYSS--QSIARSTKSK 1017

Query: 68   KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
                   D++G  ++L +DL     RY   N    +   R        R++  G     +
Sbjct: 1018 LRTCRFIDENGITVALPFDLRKTFVRYCVRNGLNRLK--RYAYGKVFSRSDALGGIHPVE 1075

Query: 128  FIQCDVDNVGSSAETA--DAEMCMMMADTLEAVG-IKRNDYHIGINNRKILDGILEKIGL 184
              +  VD++G+ A ++   A++  ++ +    +  I  + + + I ++ ++      +G 
Sbjct: 1076 RNEFAVDSIGACASSSTLTADVLCVVIEAACRLEAISSHKWQLVIGHKSLVTAAAMYLGF 1135

Query: 185  HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +D + + L VL  I   +K   +  K+       + S +         E  D  +  L
Sbjct: 1136 GDNDAVIKILNVLYYISTANKVLSREQKVERLRVGGEMSFNQANSLLNILEGEDRSLEGL 1195

Query: 245  SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
                   M    + V   +          V    +     +   +   S   R   + +G
Sbjct: 1196 RERTRPLMRARSDAVSELVKTAISDITNTVHILNLLTGEKSERLVFDGSLCYRPQTFASG 1255

Query: 305  CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG---FSIGISRLIVA 361
             +++  +  P     +  +    V  GGRYD ++   +    P       ++G   L+  
Sbjct: 1256 MIFQLQVLLPHKQSTRPII----VCTGGRYDEMLKEERHVQDPRPPIPLCAVGCGFLVDV 1311

Query: 362  LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN--FGN 419
            +  L+ S +   +            +  L +  +  + L   G+ A+      ++     
Sbjct: 1312 IAHLQCSDSPDCKSAWCSALVCSTSNSLLKEKALLVRRLWQRGVSADFLHDPVESVQLNQ 1371

Query: 420  QLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             +++ + +     +I       R  + ++
Sbjct: 1372 LIEHCEEKKIDELLIV----FDRDEVLVR 1396


>gi|260775255|ref|ZP_05884152.1| prolyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608436|gb|EEX34601.1| prolyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 571

 Score = 71.4 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/544 (9%), Positives = 131/544 (24%), Gaps = 81/544 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRI------------ 111
              +    D   +   L     ++   L R    ++  +       +             
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQTKFRDERRPRFGV 149

Query: 112 ---GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
                    + +     ++ +Q   D +  +   A   M +     L   G         
Sbjct: 150 MRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLEYRPVLADSGAIGGSGSQE 209

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
            +        L       D   N       A+        Q +  L+         +  +
Sbjct: 210 FHVLAESGEDLIAFSTESDYAANIEKAEALALADEAAAPTQEM-ELVDTPNAKTIAELVE 268

Query: 229 GANL-------------TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVI 275
              L             + E    +++ +     +      E +    A  +   E  + 
Sbjct: 269 QHGLAIEKTVKTLFVKASDEVEADLIALIIRGDHELNEVKAENLPQVAAPLEMATEEEIR 328

Query: 276 SEL-----------VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE------ 318
             +           +         + + S    G        +    G  V         
Sbjct: 329 GLIGAGPGSLGPVGLELPFIVDRSVAVMSDFGAGANIDGKHYFGINWGRDVELSQVEDLR 388

Query: 319 -----------------KQKPVVFGSVGGGGRYDGLVSR--------FKGQNVPATGFSI 353
                            K+   V      G  Y   ++              +   G  +
Sbjct: 389 NVVEGDPSPCGKGTIALKRGIEVGHIFQLGNVYSQAMNCGVLGPDGKNVILEMGCYGIGV 448

Query: 354 GISRLIVALKSLESSTNNIKEM-GPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAE 408
                    ++ +       +   P  +  +  +     + +   + L       GI   
Sbjct: 449 SRVVASAIEQNHDKYGIIWPDALAPFQVAIVPMNMHKSEEVKEAAEKLYAELTAMGIEV- 507

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +F    +  G      +    P  I+ G      G  + K+   G +    + +     +
Sbjct: 508 LFDDRKERPGVMFSDMELIGIPHTIVIGDRSMKEGNFEYKNRRTGDKTPVAMADIVEHIK 567

Query: 469 ARVA 472
           A++A
Sbjct: 568 AQLA 571


>gi|114152266|sp|Q2LTR7|SYP_SYNAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 578

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/266 (11%), Positives = 72/266 (27%), Gaps = 10/266 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   IR      G   +  P+++ ++ L +     +  
Sbjct: 31  MIRKLSAGIYSYLPLGYRVLRKVEQIIREEMNRAGAQEVYLPMVQPAE-LWQESGRWEHY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +   +D   +   L     ++   L R+  + +  +       +         R   
Sbjct: 90  GKELLRFRDRHDREYCLGPTHEEVITDLVRHEIKTYRQLPKNLYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D     AE +  +M           G++                  
Sbjct: 150 MRGREFGMKDAYSFDADEEGAEISYQKMFEAYKRIFARCGLRFRPVEADSGTIGG--SFS 207

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +  +  D   +  +         +    +       E   D     T+     +  ID 
Sbjct: 208 HEFMVMADSGEDGLVFCATCSYAANLEKAEVHPPEKMEISNDEMLLLTEVHTPNARTIDE 267

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAG 265
           + +FL++  ++ +  L     G    
Sbjct: 268 VCAFLNVTPQEIVKTLIFNADGNPVA 293



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 4/104 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGS-SKNFGNQ 420
                          V+IT ++ +  +L++  +   + L  AG  AE+ L    +  G +
Sbjct: 459 DENGIVWPMPISPYQVIITPVNMNDKALAETAERLYESL--AGKGAEVLLDDRDERAGVK 516

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            K AD    P+ +  G  + + G ++++    G+    ++ + E
Sbjct: 517 FKDADLIGIPIRVTVGPKKLAEGKVEVRLRDTGETSDVQVDSVE 560


>gi|325290366|ref|YP_004266547.1| Prolyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965767|gb|ADY56546.1| Prolyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 571

 Score = 71.4 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 41/153 (26%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  +I   IR      G   +  P+++ S+ L K     D     +F L
Sbjct: 38  GVYTYLPLALRVLRKIEQIIREEMNAKGGQELLLPIVQPSE-LWKETKRWDIYGPEMFRL 96

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +D   +   L         DL     R   +    +      YR     R        F 
Sbjct: 97  KDRHDREFCLGPTHEEVITDLVRGEVRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D    +   +  +M           G
Sbjct: 157 MKDLYSFDRDAEAGAESYRKMYEAYTKIFSRCG 189



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 7/134 (5%)

Query: 346 VPATGFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                + IG+SR + A                I     +++         +   +     
Sbjct: 438 CYMGCYGIGVSRTMAAAIEQNHDTNGVIWPIPIAPFECIIVPVSLKSEAVVETSEKLYAQ 497

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           +  AGI   +     +  G + K AD    PL I  G    + G +++     G+    +
Sbjct: 498 MLEAGIEVIIDDRDER-PGVKFKDADLIGYPLRINIGEKSLAEGKVELFRRKTGQMELLD 556

Query: 460 IKNNESWREARVAQ 473
           I+   +   + + Q
Sbjct: 557 IEQVMTTVMSMIKQ 570


>gi|227826680|ref|YP_002828459.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|259516736|sp|C3MUC7|SYT_SULIM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227458475|gb|ACP37161.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 545

 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 53/450 (11%), Positives = 119/450 (26%), Gaps = 39/450 (8%)

Query: 42  FDPIETPLLEYSDSLGKFL------PDED---RPNK-GVFSLQDDDGQWISLRYDLTAPL 91
           +  I     E  + L  +L       + D      K  +FS  ++ G  + L        
Sbjct: 111 YVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVL-------- 162

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
                                  F  E         + +    +V  +     +    + 
Sbjct: 163 ---------FHPKGQTIRNELIAFMREI---NDSMGYQEVYTSHVFKTDIWKISGHYTLY 210

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
            D L    ++ ++Y +   N      I +       D                K  L G+
Sbjct: 211 RDKLIVFNMEGDEYGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGL 270

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAGEKGF 269
             + G    D+   F +   L  E   ++   + +  +      ++   +        G 
Sbjct: 271 LRVRG-FVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGS 329

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFG 326
           +EL   +     S    + +K       G  Y     +E         +           
Sbjct: 330 DELWEKATNALISALQESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLP 389

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                   D    + +   V    +      + + L+  +           V +  +   
Sbjct: 390 ERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSS--VQVRVLPIT 447

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +     +     +R   IRAE+   + +    ++K A  +  P  +I G  E S G + 
Sbjct: 448 DEVNEYAEKVLNDMRKRRIRAEIDY-AGETLSKRIKNAYDQGVPYILIVGKKEASEGTVT 506

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITI 476
           ++     +  + + +         + Q  +
Sbjct: 507 VRARGNIEVRNVKFEKFLELLITEIGQRDV 536


>gi|149200279|ref|ZP_01877300.1| threonyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149136643|gb|EDM25075.1| threonyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 603

 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/468 (10%), Positives = 113/468 (24%), Gaps = 77/468 (16%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G A        IR+ I    R +   YG+  + TP +                      
Sbjct: 206 KGLALWMPNGTIIRDEIEKYAREMEMKYGYQRVSTPHIASEKLFQTSGH----------- 254

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                     L Y                           P+  NE        ++    
Sbjct: 255 ----------LPY--------------------YADSMFPPMELNEGDDAENSEKYYLKA 284

Query: 133 VDN-VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
           ++        +A       +   L   G               L G+L    +  +D   
Sbjct: 285 MNCPYHHLIYSARPRSYKELPYRLCEYGT-----CYRYEKSGELSGLLRVRCMTMND--- 336

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
               V    D+ ++     VK+ +    T    D++   ++  +    +      D  ++
Sbjct: 337 --AHVYLTEDQFEEEFRSMVKMYMEFYETFKFSDYSFRLSVRDDSDKFVGDPAVWDQAEA 394

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           +              K  +EL +   +                        T    +   
Sbjct: 395 LLA------------KVMDELGLEYFVGEGEAAFYGPKIDVQFKNLMGREETLSTIQVDF 442

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                 +                D   +  +   +     S     +   ++    +   
Sbjct: 443 QSACKEK----------FALKYVDSDNTEKEPIIIHRAPLSTHERFISFIMEYYGGAFPA 492

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                PV +  +      +         L     R E+   S+  F  +++   +R  P+
Sbjct: 493 W--CAPVQVCILPVQDSCMEFTNSIANELTRDLYRVEID-DSNNTFNKKIRTNTKRKIPI 549

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
            +I G  E +   + ++      +++       +  +A V +  +   
Sbjct: 550 LLIIGEQEVADNTVTVRRYGSRDQITVSRDEFVAIFKAEVKERKMLRE 597


>gi|238618767|ref|YP_002913592.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|259516721|sp|C4KKV9|SYT_SULIK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238379836|gb|ACR40924.1| threonyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 545

 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 54/450 (12%), Positives = 120/450 (26%), Gaps = 39/450 (8%)

Query: 42  FDPIETPLLEYSDSLGKFL------PDED---RPNK-GVFSLQDDDGQWISLRYDLTAPL 91
           +  I     E  + L  +L       + D      K  +FS  ++ G  + L        
Sbjct: 111 YVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVL-------- 162

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
                                  F  E         + +    +V  +     +    + 
Sbjct: 163 ---------FHPKGQTIRNELIAFMREI---NDSMGYQEVYTSHVFKTDIWKISGHYTLY 210

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
            D L    ++ ++Y +   N      I +       D                K  L G+
Sbjct: 211 RDKLIVFNMEGDEYGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGL 270

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAGEKGF 269
             + G    D+   F +   L  E   ++   + +  +      ++   +        G 
Sbjct: 271 LRVRG-FVQDDGHIFLREDQLMEEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGS 329

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFG 326
           +EL   +     S    + +K       G  Y     +E         +           
Sbjct: 330 DELWEKATNALISALQESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLP 389

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                   D    + +   V    +      + + L+  +           V +  +   
Sbjct: 390 ERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSS--VQVRVLPIT 447

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +     +     +R   IRAE+   + +    ++K A  +  P  +I G  E S G + 
Sbjct: 448 DEVNEYAEKVLNDMRKRRIRAEIDY-AGETLSKRIKNAYDQGVPYILIVGKKEASEGTVT 506

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITI 476
           ++     +  + + +         +AQ  +
Sbjct: 507 VRARGNIEVRNVKFEKFLELLITEIAQRDV 536


>gi|281206033|gb|EFA80222.1| putative protein serine/threonine kinase [Polysphondylium pallidum
            PN500]
          Length = 1585

 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 71/476 (14%), Positives = 148/476 (31%), Gaps = 95/476 (19%)

Query: 74   QDDDGQWISLRYDLTAPLARYVAE------------------------------------ 97
             DD GQ   +RYDL    A Y+A+                                    
Sbjct: 1126 MDDSGQLFEMRYDLRNSFADYLAQQFATTYNPYGNNNYNASNITDEDDAELPSSSNKELR 1185

Query: 98   ----------NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM 147
                      N     +   T    P    +            C  D VG+S+  ADAE+
Sbjct: 1186 TFDDLMDFFSNSPLKRYELDTVYRRPHLVGKSPKELSQ-----CCFDIVGASSLFADAEV 1240

Query: 148  CMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFG 207
              +  +  +++   + +Y + +N+  I++ +   +G+      +E  I+L    +L +  
Sbjct: 1241 IKVACEIFDSL-PSQTNYMVRLNHTGIVEHMWRYVGITDQKLRDEIGIILS---QLLRNP 1296

Query: 208  LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK 267
               VK +L E              LT++Q++ + +++ +               + +   
Sbjct: 1297 WTTVKKVLLER-----------LQLTAKQVERLANWILVKGSLLDVTKKIANTASTSNND 1345

Query: 268  GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
               +L V  E +R       R+ + + +   L Y     + + + F V+  +     F  
Sbjct: 1346 QCTQLNVYLEEMRSLYGYLERLGVVNKVSFDLGYVYCENFYSGITFQVLIREDNT-RFEC 1404

Query: 328  VGGGGRYDGLVSRFKGQNVPATG--------------------------FSIGISRLIVA 361
               GGRYD  +++   Q+                               +       +  
Sbjct: 1405 TAVGGRYDQTIAKLIPQHNLTLRKSDEAPAVPVVGLSIALDKIYSKEREYQHYQREQVAI 1464

Query: 362  LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                  S         + I +M   ++   +       L  AG R E       +   Q 
Sbjct: 1465 QIHSNQSPLARFSQPDIFICSMG-SANLFGEKVSIVSDLWQAGFRVETVYREDTSAEEQT 1523

Query: 422  KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            + A     P  ++      ++ M+++K++ K KE     ++   +    V +  + 
Sbjct: 1524 ELALNSGAPYVVVLKEKG-NKKMIKVKNIEKKKEDDISREDLVKFLSGIVTRSKVK 1578


>gi|300024080|ref|YP_003756691.1| tRNA synthetase class II (G H P and S) [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299525901|gb|ADJ24370.1| tRNA synthetase class II (G H P and S) [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 392

 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 126/400 (31%), Gaps = 67/400 (16%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
             +    E +       ++ +++   G++ +   +++ +D     + +  R     +   
Sbjct: 6   TREFEALEAQA-----QTLMSVFTKAGYEAVAPAIIQPADVFLDVIGESLRAR--TYVFT 58

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK--HGPGRFRQFIQCD 132
           D DG  + LR D+T P  R           P R    G  FR +         R+F Q  
Sbjct: 59  DPDGAELCLRPDITVPTCRLHLARHVDPATPARYCYRGAAFRFQPQGADASHPREFRQAG 118

Query: 133 VDNVGSSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
           ++  G +   A   ++  ++   +E +G+K  D+ + + +  +   IL+  G+    K  
Sbjct: 119 IERFGDAEREAAEADVIAIVIKAIEKLGLK--DWTLRLGDLGLFSSILDVAGISPRWKKR 176

Query: 192 ERLIVL-----------------------------RAIDKLDKFGLQGVKLLLGEGRTD- 221
                L                                          V   L +   + 
Sbjct: 177 LDDAFLKPQSFREALKAFASGASATRLSVPAALLASLDSANRAASETAVATYLDDNAIEL 236

Query: 222 --------------NSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAG 265
                            +      L ++   ++  +  I         ++ ELV G   G
Sbjct: 237 IGTRPLADITEHLIGIKESGDEKPLAADAAALIGRYTEISGPARTAGAKIAELVNGAPVG 296

Query: 266 EKGFNE-LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
                E       L+  +G + +R+  S+   R LEYYTG V+E           +    
Sbjct: 297 SSAALETYDRRLALLANAGIDLDRVTFSAEFGRSLEYYTGLVFEV--------RAKTLGP 348

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
              +  GGRYDGL+         A   +   +  ++A   
Sbjct: 349 QSPLATGGRYDGLMRAAGADADVAAVGAAIHTERLLAALQ 388


>gi|212710377|ref|ZP_03318505.1| hypothetical protein PROVALCAL_01437 [Providencia alcalifaciens DSM
           30120]
 gi|212686959|gb|EEB46487.1| hypothetical protein PROVALCAL_01437 [Providencia alcalifaciens DSM
           30120]
          Length = 572

 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 48/161 (29%), Gaps = 8/161 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  D     +R+  ++ + +R   EN G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYDWLPTGVRVLRKVENIVREEMENAGAIEVSLPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +    D   +   L     ++   L R    ++  +          +R     R   
Sbjct: 90  GPELLRFVDRGERPFVLGPTHEEVITDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
                F             S +     M    +     +G 
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDAMYEAYSKIFTRIGF 190



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 30/112 (26%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     L+  GI         +  G  
Sbjct: 461 DDRGIIWPDAIAPFHVAILPMNMHKSYRVKEVAEKLYADLKAQGIDVIFDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K      +    + N  S+ + ++A
Sbjct: 520 FADMELIGVPYTIVIGDRNLDTNQVEYKSRRSDDKQLVGLDNVVSFLKEKLA 571


>gi|322696936|gb|EFY88721.1| putative threonine--tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 491

 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 48/453 (10%), Positives = 107/453 (23%), Gaps = 62/453 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI NR++D IR  Y  YGF  + TP + Y  +L       +     ++++
Sbjct: 60  GSPIFLPNGARIFNRLIDFIRKQYARYGFQEVITPTI-YKKALWAKSGHLENYADDMYTV 118

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                                 G    +            +  +
Sbjct: 119 T--------------------------GNASTPGKDTGGCCGSDHGPVEPDSEADNEYGL 152

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +            +     L               +R  + G L  +        ++ 
Sbjct: 153 KPMNCPGHCLIFASKVRSYRELPVRYA-----DFSPLHRNEVSGALSGLTRVRRFHQDDG 207

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGE-GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            I  R          + +K  L              G  L            + D     
Sbjct: 208 HIFCR-----PSQVEEEIKKTLDFVKAVYGVLRLGVGYRLALSTRPKDHFIGTEDEWNRA 262

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  +    +   E   NE           G   + +   S             ++    
Sbjct: 263 EDRLKTALDSSGMEWSINEADGAF-----YGPKIDIVIKDSDGKEHQTATIQLDFQLPKR 317

Query: 313 FPVMNEKQKP--VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           F +  +   P     G               +   +           + + ++S +    
Sbjct: 318 FALEYQAPAPEYEARGETTNDPILLAEYGPVRPVMIHRAVLGSVERLMALLIESYDGKWP 377

Query: 371 NIKEMGPVLITTMDHDS---DSLSKYQMYTQMLRTA-------------GIRAEMFLGSS 414
                   +I T++      D   + +     LR               G+  ++   S+
Sbjct: 378 FWLNPRQAIILTVNTSRPVLDWADEVKEILLGLRKEAGQTSTEGPVNPTGLAVDVDY-SA 436

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           ++ G++++ A        ++ G  +   G + +
Sbjct: 437 RSLGSKIREARTNGYSQILVVGEEDVKHGQVSL 469


>gi|183221968|ref|YP_001839964.1| prolyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912036|ref|YP_001963591.1| prolyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226701304|sp|B0SDM9|SYP_LEPBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701305|sp|B0SM58|SYP_LEPBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167776712|gb|ABZ95013.1| Prolyl-tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167780390|gb|ABZ98688.1| Prolyl-tRNA synthetase (Proline--tRNA ligase; ProRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 586

 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 71/560 (12%), Positives = 141/560 (25%), Gaps = 86/560 (15%)

Query: 7   LRAELPR----GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           +RA L R    G        +R+  +I   +R   +  G    + P+L  S+   K    
Sbjct: 27  MRAGLIRKSAAGLYSYLPLGLRVLRKIEGIVRKEMDKAGGLEFQLPILTPSEI-WKESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY--D-----LTAPLARYVAENFDTIVFPCRTYRIGPVF 115
            D+  K +F L+D       L    +     L  P+ R   +    +      +R     
Sbjct: 86  WDKMGKEMFRLKDRHDNESCLGPTHEESFCVLVKPMVRSYKDLPINVYQIHTKFRDEIRP 145

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK-- 173
           R        F             S +     M          +G+          N    
Sbjct: 146 RFGVIRSREFTMKDAYSFHLDDESLDKTYQTMRKTYRRIFAGMGLTTIPVQADSGNMGGS 205

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV--------KLLLGEGRTDNSGD 225
             +  +    +  +              +     +           K  L      +  +
Sbjct: 206 ASEEFMVVSPIGEETLTICPSCHYSGNIEKTPVIVNRNATKQVFDGKGKLHTPAKKSITE 265

Query: 226 FTKGANLTSEQIDI----------MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV- 274
             +  N   E +            ++ FL  D E + ++L   +        G  E+   
Sbjct: 266 VAEFLNTKEENLLKAVAVVADGQYILVFLEGDRELNENKLKNHLGCNELRPMGPAEMEKL 325

Query: 275 --------------------ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
                               I  L+  +             + G++  +    E +    
Sbjct: 326 GLVPGFIGPGFPKSESLKIYIDALLDWNFSYIAGGNEIDHHIAGVQLTSIFKEEEVTKID 385

Query: 315 VMNEKQKPVVFGSVGG---------------GGRYDGLVSRFKGQNVPATGFSI------ 353
           +   K          G               G +Y          +      +       
Sbjct: 386 ISQAKVGDPCPSCGTGLTAEKGIEVGHIFKLGQKYSKAFDITVLNDKGKATTTTMGCYGI 445

Query: 354 -GISRLIVALKSLESSTNNIKEMGPVLITT----MDHDSDSLSKYQMYTQMLRTAGIRAE 408
                +   ++           +     T     +  + D ++K +   + L  +GI   
Sbjct: 446 GVNRCMATVIEQCNDEKGIFWPVSIAPFTVCLVSIAKNPDDIAKIETIYKSLVESGIEVL 505

Query: 409 MFL-GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
                    F    K ++    P+ I  G G   +  + I D     E +     NE   
Sbjct: 506 WDDRDLGPGFK--FKDSELIGFPIRITLGKGFLEKNEITILDRKSMAEDTLVYTTNEEL- 562

Query: 468 EARVAQITIPISELVSTVKK 487
              V  + + IS+L  T++K
Sbjct: 563 ---VTHLKLKISQLEETIEK 579


>gi|312880900|ref|ZP_07740700.1| tRNA synthetase class II (G H P and S) [Aminomonas paucivorans DSM
           12260]
 gi|310784191|gb|EFQ24589.1| tRNA synthetase class II (G H P and S) [Aminomonas paucivorans DSM
           12260]
          Length = 399

 Score = 71.0 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 76/455 (16%), Positives = 143/455 (31%), Gaps = 64/455 (14%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
              P+G A           R      +++  +G+ P     L+  + L   L       +
Sbjct: 2   LRTPKGCATRGGSLASRIERCRTEALDLFSRHGYRPFCASSLQRLEDLQGRLSPT--RMR 59

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            V +L    G+  +LR DLT     Y+A +      P R      VF         F   
Sbjct: 60  QVLALTSPHGEPCALRADLTLAAVAYLAAHHLPQERPLRLCYADRVFLTPSPPEETFES- 118

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            Q  ++ +G   E ADAE+  ++   L+ + +  +                         
Sbjct: 119 YQVGLELLGWEGEGADAEVAHLLLRLLDRLDLPESVLV---------------------- 156

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
            L +  +V R    L     +G+   L EG         +   L  ++ + +     +  
Sbjct: 157 -LGDASLVARTFRGLPPPRARGLVEALQEGSLTRYDRLLE--GLEEDRAEALRRLPRLKG 213

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              + +    +     G +    L      +       +R++     +R L YY+G +++
Sbjct: 214 GPEVLDRAAGLMDDPEGLEPLRRLGSTLTEL----GYGHRLRYDLGFIRDLGYYSGPLFQ 269

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A                     GGRYD L++          G         + L++L  +
Sbjct: 270 AYGTPGGTPLGG----------GGRYDRLLAD--------LGLVGQAVGFALELEALGRA 311

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              +          +   + S +    +++ L   GIRAE+     ++    L+ A  R 
Sbjct: 312 ---VPRGPAPCDALVWCGTASPASGLAFSRELEARGIRAELSWHPRRS--ASLELARLRG 366

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            P        E S        L  G E S+ ++  
Sbjct: 367 VPW--WVDPSEGSA-------LRLGDETSQSLETF 392


>gi|296536135|ref|ZP_06898264.1| proline--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296263547|gb|EFH10043.1| proline--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 436

 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 47/461 (10%), Positives = 111/461 (24%), Gaps = 70/461 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  ++   +R   +  G   I  P ++ ++ L K     D  
Sbjct: 31  MIRQTSAGIYAWLPLGLRVLQKVSQIVREEQDAAGAQEILMPTIQSAE-LWKQSGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  + D                                          E        
Sbjct: 90  GKEMLRITDR--------------------------------------HEREMLFGPTNE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + +     +   S       +  +     + +  +           K             
Sbjct: 112 EMVTDLFKSYAKSYRDLPRNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDIDAEAAR 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  +  LR   ++    +  ++   G    D S +F   A     Q+ +    L  
Sbjct: 172 LSYKKMFVAYLRTFARMGLKAI-PMRADTGPIGGDLSHEFIILAETGESQVYLHKDLLEF 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D    + +  +           +      ++ +      +     +    RG+E      
Sbjct: 231 D---VLAQKPDYEGDLDPTVDFWTSRYAATDEMHDEAAWNALGAENQVSARGIEVGHIFY 287

Query: 307 YE------AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           +         L     +        GS G G             +     +   ++    
Sbjct: 288 FGEKYSKAMGLTVAGPDGNPVIPQMGSYGIGVSRLLGALIEANHDDAGIKWPDAVAPFRC 347

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           A+ +L+        +   L   +  D+                     ++    +  G +
Sbjct: 348 AILNLKPGDLATDALSEKLYAALGGDA---------------------VYDDRGERAGVK 386

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              AD    P   I G    + G++++K  A G+     I+
Sbjct: 387 FNDADLAGYPWQAIIGPRGAANGIIELKRRATGERQEVSIE 427


>gi|111219789|ref|YP_710583.1| threonyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111147321|emb|CAJ58970.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) [Frankia alni
           ACN14a]
          Length = 682

 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 51/458 (11%), Positives = 117/458 (25%), Gaps = 85/458 (18%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              E+ +G          IR+ +    R      G+  + TP +   D            
Sbjct: 275 FSPEIGKGLPLWLPNGTIIRDELEGWARQTERRLGYRRVVTPHITQEDLYF-LSGHLPYY 333

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +++    +G+   L+                        Y+  P    E        
Sbjct: 334 AEDLYAPIQIEGENYYLKP--------------MNCPHHHMVYKARPKSYRELPYK---- 375

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                    +         E    +   + A G  +ND HI     +  +  LE + +H 
Sbjct: 376 ---------IAEYGTVYRFERSGQLHGLMRARGFTQNDAHIYCTREQAKEQFLEVMRMHD 426

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +      +     +  L             +   D             E  + +      
Sbjct: 427 EYYRALGITDFYMVLALRDP------ANTTKYHDDAQMW---------EDAERIT----- 466

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVIS-ELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                               +  +E  +   E +  + +   ++      V G E+    
Sbjct: 467 -------------------REAMDESGIPYVEELGGAAHYGPKVDFIIRSVTGKEFAAST 507

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
               +      + K               D   +  +   +           +    +  
Sbjct: 508 NQVDLYTPQRFDLKYH-------------DADGTDKQVVVIHRAPLGSHERFVAFLTEHF 554

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +         V +  +  + D     +  +Q L  A +R ++     +    +++ A 
Sbjct: 555 GGAFPVWLAPEQVRVIPIMPELD--EYAETVSQALLDADVRVDVDASDGR-LPARVRTAV 611

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            R  PL ++ G  E   G + ++D   G+E S  + + 
Sbjct: 612 TRKIPLIVVVGRREVEEGSVSVRD-RSGQETSMPLADF 648


>gi|114777677|ref|ZP_01452637.1| prolyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114551893|gb|EAU54427.1| prolyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 572

 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 39/154 (25%), Gaps = 8/154 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  D     +R+  RI   IR   E  G   +  P+++ ++   K      +    +  
Sbjct: 37  SGVYDYLPLALRVLRRIEAIIREEMERAGAQELLMPMVQPTELWEKS-GRLAKYGPELLR 95

Query: 73  LQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            +D       L         DL +   R   +    +      +R     R        F
Sbjct: 96  FEDRHAHQSCLGPTHEEVICDLMSRELRSYKQLPLNLYQIQNKFRDEIRPRFGLMRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                        S       M        + +G
Sbjct: 156 VMKDAYSFHADDESLMAEYRNMFDTYTRIFDRLG 189



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +  ++    PV++ +M      L       + L+TAGI        ++  G + K A+
Sbjct: 461 GIAWPDVLAPFPVILVSMGKSDAVLEASGEIYKQLQTAGIDVLWD-ERNERPGVKFKDAE 519

Query: 426 RRNCPLAIIQGTGERSRGMLQ 446
               PL I+ G      G+ +
Sbjct: 520 LIGIPLQIVIGDRGLKEGVAE 540


>gi|269214916|ref|ZP_05987412.2| proline--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208774|gb|EEZ75229.1| proline--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 625

 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 74/570 (12%), Positives = 151/570 (26%), Gaps = 104/570 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 81  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 138

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
                  K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 139 GRWKFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEV 198

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      F            +S +T   +M          +G+    +     +  
Sbjct: 199 RPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDAYCRIFTRLGLA---FRPVAADTG 255

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            + G          +   + +      D      L     L GE       +  K     
Sbjct: 256 SIGGTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAA-AQAELVKVHTPN 314

Query: 234 SEQIDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNEL 272
            + ID +V FLSI +EK++                     HE  ++    +AG K    +
Sbjct: 315 VKTIDSLVDFLSIPIEKTLKSIVVEGENEGELILLLLRGDHEFNDIKAEKLAGVKSPLTM 374

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
              + +V + G N   +   S   +   ++ T    + ++G            FG     
Sbjct: 375 ASPAAIVEQFGANGGSLGPVSFAGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAE 434

Query: 332 GRYDGLVSRFKGQNVP-------------------------------------------A 348
             +  L +  +G   P                                            
Sbjct: 435 PEFVDLRNVVEGDESPDGQARLKLARGIEVGHVFQLRDKYTKAMNVSFLDNNGKSQIMEM 494

Query: 349 TGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLR 401
             + IGI+R++ A       E      K M P  +  +  +                 L 
Sbjct: 495 GCYGIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELL 554

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AG    +     +  G  L  ++    P  I+ G      G +                
Sbjct: 555 AAGADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNV---------------- 597

Query: 462 NNESWREARVAQITIPISELVSTVKKILQE 491
             E           + I E+V+ V   L  
Sbjct: 598 --EYAERRENEAQAVAIGEIVARVTASLNA 625


>gi|304436529|ref|ZP_07396502.1| proline--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370472|gb|EFM24124.1| proline--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 569

 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 69/252 (27%), Gaps = 17/252 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I   IR   +  G   I  P+L+ S+ L +           +  +
Sbjct: 38  GMYTYLPLAWRTIRKIEQIIREEMDAAGGQEIMMPILQPSE-LWEESGRWGAYGAEMICV 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR------IGPVFRNEKHGPGR 124
           +D  G+   +     ++   L R    ++  +       +        P F   +     
Sbjct: 97  KDRHGREFCMGPTHEEMITALVRDEVRSYKQLPLMLYQIQDKFRDERRPRFGVMRSREFI 156

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            +     D D  G +       +      T   +  +  +   G       +        
Sbjct: 157 MKDLYSFDKDIAGMNESYRKMAVAYTNIFTRCGLNFRAVEADSGAIGGGHSEEFTVLAPE 216

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                         A D       +   L   +   + +    K A   +  I ++  +L
Sbjct: 217 GESRIACCDACSYAASD-------EKAALRPIDAAAEEALPLEKVATPDAHTIAMLAEYL 269

Query: 245 SIDLEKSMHELY 256
            I +EK++  + 
Sbjct: 270 RIPVEKTIKAVA 281



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 1/88 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++       + L+  +   + LR AG+   +     +  G +    D 
Sbjct: 463 IWPRAIAPYEVVVVAVNAKVEEQLAYAEEIYEELRAAGVDVLLDDRRERA-GVKFNDCDL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              P+ I  G      G +++K    G+
Sbjct: 522 IGYPVRIAIGPKTIENGTIEVKIRQSGE 549


>gi|229918663|ref|YP_002887309.1| prolyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229470092|gb|ACQ71864.1| prolyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 569

 Score = 71.0 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 65/533 (12%), Positives = 138/533 (25%), Gaps = 77/533 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++ + I   IR      G   +  P ++ ++ L +           +  L
Sbjct: 41  GIYSYLPLGHKVLHNIQTIIREEMNRAGAQELLMPAIQPAE-LWEETGRWGIYGPELMRL 99

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH----GPGRFR 126
            D   +  +L     +L   + R    ++  +       +                  F 
Sbjct: 100 TDRHDRRFALGATHEELITSIVRDELNSYKKLPMNLYQIQTKYRDERRPRFGLLRGREFL 159

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH--------IGINNRKILDGI 178
                         +     M    +   +  G+K                +  + L  I
Sbjct: 160 MKDAYSFHATQEDLDEEYTNMYNAYSRIFDRTGLKYRPVVADSGAIGGKDTHEFQALADI 219

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E   ++ D       I +       +     V+ L      +N       A L  +   
Sbjct: 220 GEDTIVYTDTSNYAANIEMAETLDRYEMQQADVRPLEKVDTEENRTIEDVAAFLNVDPKT 279

Query: 239 IMVS-FLSIDLEKSMHELYELVKGTIAGEKG-----FNELVVISELVRKSGYNSNRIKIS 292
            + S   ++D E  M  +    +      K        +L   +++V         +   
Sbjct: 280 TIKSVLFNVDGETVMAIVRGDHEANEVKVKNALGGLDIQLEEEAKIVELFNCAPGTLGPI 339

Query: 293 STIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP---- 347
           +  V+ + +Y    + +A+ G    N     V          Y  L    +G   P    
Sbjct: 340 NAPVKVVADYAVKYLVDAVCGANEANTHYTGVNAARDLAEMTYHDLRFVVEGDLAPDESG 399

Query: 348 ---------------------------------------ATGFSIGISRLIVALKSLE-- 366
                                                     + IG+SR + A+      
Sbjct: 400 PVRFARGIEVGQVFKLGTRYSEAMGATFLNEEGRAEPLIMGCYGIGVSRTLSAIVEQHHD 459

Query: 367 ----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQL 421
                   N+      LI     D   +       + L   G   ++     K   G + 
Sbjct: 460 DRGIVWPRNVAPFDLHLIAINAKDETQVELANRLYEEL---GQTYDVLFDDRKERAGVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             AD    P+ +  G      G++++K  A G+ +   I   +    ++ +++
Sbjct: 517 ADADLIGLPIRVNVGKK-AGEGIVEVKVRATGEVIETSIDELKEVIASKFSEV 568


>gi|312898748|ref|ZP_07758137.1| prolyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620179|gb|EFQ03750.1| prolyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 574

 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 47/140 (33%), Gaps = 7/140 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   LR +   G         ++  ++ + IR      G   +  P+++ ++   +  
Sbjct: 26  MLKAGMLR-KNAAGLYSFLPLGRKVCLKVENIIRKEMNRSGAQEVMMPIVQPAEI-WRET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D     +F L+D       L     +L   L R    ++  +      +++   +R+
Sbjct: 84  GRWDVYGPEMFKLKDRHDNEYCLGPTHEELITTLVRNELRSYKQLP--VNLWQMQNKYRD 141

Query: 118 EKHGPGRFRQFIQCDVDNVG 137
           E        +  +  + +  
Sbjct: 142 EIRPRFGLMRSREFVMKDAY 161



 Score = 36.7 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           G +   AD    P+ +  G+   + G +++K     +E    I+    
Sbjct: 514 GVKFNDADLIGYPVRLTVGSK-AADGKVEVKIRRTDEEEEVTIEGAAE 560


>gi|220931621|ref|YP_002508529.1| prolyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782904|sp|B8CW65|SYP_HALOH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219992931|gb|ACL69534.1| prolyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 568

 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 77/270 (28%), Gaps = 14/270 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   IR + +  G   +  P++  SD L K     ++    +   
Sbjct: 38  GVYSFLPLGYRVIKKIEGIIRKVMDESGAQEVLMPVIHTSD-LWKESGRWEKFGPLMIKF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEKHGPGRFR 126
           +D  G+   L     ++   L R    ++  +       +         R        F 
Sbjct: 97  EDRKGREYCLGPTHEEVITDLVRDEIRSYKDLPLNLYQIQTKVRDEIRPRFGLMRSREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D      + +   M     +     G++              D     +    
Sbjct: 157 MKDAYSFDRDYEGLDKSYQVMYGAYTEVFNRCGLEVRAVEADTGAMGGKDSHEFMVLAES 216

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +              +++   + VK    E         T G     ++ID +V FL +
Sbjct: 217 GEDDIAFCNRCDYAANVERAEARYVKSEKNEEIKPLEKVETPGK----KKIDELVEFLKM 272

Query: 247 DLEKSMHELYELVKGTI--AGEKGFNELVV 274
             EK +  +  L  G    A  +G +EL  
Sbjct: 273 PSEKMIKAVAYLADGEPVLALVRGDDELNE 302



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 39/128 (30%), Gaps = 19/128 (14%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V+I  +    +   + +     L+   I   +   + +  G +  
Sbjct: 457 DEHGIIWPKAIAPYQVIILPLGKGDEVNKRAEELYLELKDNNIEVLLDDRNERA-GVKFN 515

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            AD    PL +  G+    +G+++ +    G                      I + + +
Sbjct: 516 DADLIGIPLRLTIGSRSLDKGVIEARVRGTG------------------QDYEISVEDAI 557

Query: 483 STVKKILQ 490
             +KK+L+
Sbjct: 558 KDIKKLLE 565


>gi|284991611|ref|YP_003410165.1| threonyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064856|gb|ADB75794.1| threonyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 690

 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/469 (10%), Positives = 110/469 (23%), Gaps = 87/469 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G A    K   +R  + D  R  +E  G+  + TP +             +   +G++ 
Sbjct: 284 SGLAVFHPKGGVVRREMEDYSRRRHEEAGYSFVNTPHITKGQLFQTS-GHLEWYAEGMYP 342

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                  A + D               R +              
Sbjct: 343 -----------------------AMHLDEERDAEG------KVRRQGQDYYLKPMNCPVH 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                S   +       +          K    H     R                +   
Sbjct: 374 NLVFRSRGRSYKELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTPEQMQGEI 433

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS----GDFTKGANLTSEQIDIMVSFLSIDL 248
           R ++   +D L  +GL+   L L     + S     D+ +  +   E  +     L +D 
Sbjct: 434 RSLLQFVLDLLADYGLEDFYLELSTRNPEKSIGSDEDWERATDALREAAEASGLDLVLDP 493

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
             +     ++            ++  I   +            +    +        ++ 
Sbjct: 494 GGAAFYAPKISVQARDAIGRTWQMSTIQVDLMLPERFGLEYTAADGTRQRPVMIHRALFG 553

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           ++  F  +  +     F +                                         
Sbjct: 554 SMERFFGVLTEHYAGAFPAWLA-------------------------------------- 575

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                   PV +  +    + +   +     LR  GIR E+     +    +++ A ++ 
Sbjct: 576 --------PVQVVGIPVTDEQVGYLRDVALQLRARGIRVEVDDSDDR-MQKKIRTASKQR 626

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVA 472
            P  +I G  +   G +  +    G +     + + +     W   R  
Sbjct: 627 IPFVLIAGATDAEAGAVSFR-FRDGSQHNGVPVEKAVAAIAEWVAGRAN 674


>gi|304387349|ref|ZP_07369541.1| proline--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338600|gb|EFM04718.1| proline--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 599

 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 61/522 (11%), Positives = 141/522 (27%), Gaps = 80/522 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 55  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 112

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 113 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 172

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +   ++     +   + 
Sbjct: 173 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLGLEFRPVAADTGSIG 232

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       +  K      + 
Sbjct: 233 GTGSHEFQVLAESGEDVIAYSDTSDYAANVELAPTLPLKGERTA-AQAELVKVHTPNVKT 291

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           I+ +V FL+I +E+++                     HE  ++    +AG K    +   
Sbjct: 292 IESLVEFLNIPVEQTLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASP 351

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +V + G N   +       +   ++ T    + ++G            FG       +
Sbjct: 352 AAIVEQFGANGGSLGPVGFAGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEF 411

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 412 VDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 471

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M P  +  +  +                 L  AG
Sbjct: 472 GIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAG 531

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
               +     +  G  L  ++    P  I+ G      G ++
Sbjct: 532 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNVE 572


>gi|296271778|ref|YP_003654409.1| tRNA synthetase class II (G H P and S) [Arcobacter nitrofigilis DSM
           7299]
 gi|296095953|gb|ADG91903.1| tRNA synthetase class II (G H P and S) [Arcobacter nitrofigilis DSM
           7299]
          Length = 281

 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 6/135 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E+P+G      K  +++  +   I +I  +  F+ I TP   YS              K 
Sbjct: 6   EIPKGSRLYFGKTAKLKRELESKISDILYSNNFEEIVTPNFSYSQ------HQSIEDEKK 59

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           + +  D     +SLR D +  + R + +         + + I P+F        +     
Sbjct: 60  LINFSDIKNNQVSLRADSSLDVVRIITKRLGRTTTHKKWFYIQPIFSYPSKEQYQIGCEW 119

Query: 130 QCDVDNVGSSAETAD 144
               +       TAD
Sbjct: 120 IDHDNISDILNLTAD 134


>gi|262065930|ref|ZP_06025542.1| proline--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380410|gb|EFE87928.1| proline--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 567

 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + +R   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIRKIENIVREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  LQD   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GAEMLRLQDRHERDFVLSPTQEEMITSIVRSDISSYKSLP--LNLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GLMRGREFTM 157



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 107/334 (32%), Gaps = 32/334 (9%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +   ++ + + + +  +  +          D++    ++G    + E +  N  + 
Sbjct: 254 VHTPDCPTIESLAKYLDIPLERTVKALTYKDMGTDEIYMVLIRG-DFEVNEVKLKNILNA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMATDEEIEKIGLTKGYIGPYKLPAEIKIVAD-LSVIEVTNHVVGSHQKDYHYKNVN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-K 342
           Y  +      T +R +     C+    L      E  +    G           +    K
Sbjct: 372 YGRDYKADIVTDIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDENGK 431

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD------HDSDSLSKYQMY 396
            Q +    + IG++R + A     +  N I     +    +D       +   +S  +  
Sbjct: 432 TQYMLMGCYGIGVTRTMAAAIEQNNDENGIIWPVSIAPYIVDVIPANIKNEGQVSLAEKI 491

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L+   I   +     +  G + K AD    P  ++ G      G++++K    G+  
Sbjct: 492 YNELQAENIDVMLD-DRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVEVKIRRTGE-- 547

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                            + +  +E+V+ +K++++
Sbjct: 548 ----------------TLELAQAEVVAKIKELMK 565


>gi|261403652|ref|YP_003247876.1| threonyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370645|gb|ACX73394.1| threonyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 620

 Score = 70.6 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 103/345 (29%), Gaps = 25/345 (7%)

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
           E+ +  A       +K++ Y +       L  +      +        L  LR     D 
Sbjct: 281 ELMLRFAACFGQFMMKKDMYLLPRYLPLKLYELSTYSFRYEQRGELVGLKRLRCFTMPDM 340

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
             +        E       +  +  +  +    ++  F     ++     +++ K   + 
Sbjct: 341 HTVCLDLKQAMEEFEKQFWECLRTGDDLNLSYSVIFRFTKDFFDEHRDWFFKIAKEYKS- 399

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           + G + ++ I    +        I +  ++ R +E  T       +   V + K+  +  
Sbjct: 400 KTGKDIILEILPKRKHYWVGKVDIAVIDSLGRPIENPT-------VQIDVESAKRFNIKV 452

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
                G  Y  ++      ++      +     I A     ++      + P+ +  +  
Sbjct: 453 H-TNEGEIYPIILHCSPTGSIERVLCGLLEKAAIEA--ERGNAPMLPVWLSPIQVRVIPI 509

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
                       + L+   IR ++      +   +++ A R   P  ++ G  E     L
Sbjct: 510 AERHYDYALKVAEKLKDNKIRVDVDDRED-SVSKKIRNAGRDWIPYVVVIGDEEMESDKL 568

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
            +                +     +  +  + + EL+  ++K ++
Sbjct: 569 TV-------------TVRKKSTLKKPHKEKMSLEELIELIQKEIE 600


>gi|18312849|ref|NP_559516.1| threonyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|22654124|sp|Q8ZWK4|SYT_PYRAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|18160337|gb|AAL63698.1| threonyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 608

 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 55/177 (31%), Gaps = 20/177 (11%)

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           I  F +     +      V    +    V            +   +   +  ++      
Sbjct: 428 IATFQIDVGNAQRFGIKYVDENNQIKYPVIIHTAILGSVERYLYAVFDTMAKMEKEGKVP 487

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + PV +  +    ++L        +L   GIR ++     +    +++ A+    
Sbjct: 488 RLPTWLSPVQVRVIPVSKENLKYAISIADVLEAEGIRVDID-DREETLSKKIRDAETSWI 546

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           P  ++ G+ E + G++ +++   G                   Q  I + ELV  +K
Sbjct: 547 PYIVVVGSKEEAEGVIAVRERGGG-------------------QYKIRLEELVKKLK 584


>gi|225155152|ref|ZP_03723647.1| threonyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224804099|gb|EEG22327.1| threonyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 646

 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 3/141 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F        V ++              V I  +     + S+     
Sbjct: 497 NQPHRPVMIHRAPFGSMERFCGVLIEHFAGDFPVWLAPEQVRILPISDKVAAYSE--KLY 554

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             LR AG+R  +   S K  G +L+ A+    P  I+ G  E     + ++  AKG E  
Sbjct: 555 NELREAGVRVVLDSDSDK-IGAKLRRAELSKIPYMIVAGQKEAEAEAISVRSRAKGDEGV 613

Query: 458 REIKNNESWREARVAQITIPI 478
               + ++     +    +P+
Sbjct: 614 MPFADWKARLLEEIRTRALPV 634


>gi|85375301|ref|YP_459363.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|123293655|sp|Q2N6X5|SYT_ERYLH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84788384|gb|ABC64566.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 672

 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 51/457 (11%), Positives = 125/457 (27%), Gaps = 71/457 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  +I   +   +R   +  G+  I+TP +  +    +      +  + +F +
Sbjct: 276 GSVFWHPQGYKIWRELEAYMRRKMDGAGYREIKTPQVMDARQ-WEQSGHWGKYRENMFVI 334

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D                                          E        + +  D 
Sbjct: 335 PD------------------------------------------EIPNTEDEGELVSKDA 352

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           D +        A + +          +      +G  +R    G L  +      +  + 
Sbjct: 353 DWMALKPMNCPAHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALHGLMRV--RQFTQD 410

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +      ++    L  E   D   D+     L  EQ            E+   
Sbjct: 411 DAHIFCTEDQVVEEVRAFCKLADEVYRDFGFDYDVKLALRPEQR--------FGSEEDWD 462

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  + ++  +A     N+     EL  +  + + +++   T   G  +  G +    +  
Sbjct: 463 KAEQELRDAVAEAGMANDDYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLP 522

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             ++        G               +   +    F      + + ++          
Sbjct: 523 ERLDATYVGEDGGK-------------HRPVMLHRAIFGSYERFIGILIEHFAGRLPVWL 569

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLA 432
                ++ T+  D+D     +     L  AGIR +  L + K NF    +       P  
Sbjct: 570 APTQAVVATIVSDAD--GYAKEAVAKLEAAGIRVDGDLRNEKINFKV--REHSLAKVPHL 625

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           ++ G  E   G + ++ L + ++    + +  +  + 
Sbjct: 626 LVVGKREAEEGTVAVRTLGEKEQQVMSLDDAIAMLKD 662


>gi|330828282|ref|YP_004391234.1| Prolyl-tRNA synthetase, family II [Aeromonas veronii B565]
 gi|328803418|gb|AEB48617.1| Prolyl-tRNA synthetase, family II [Aeromonas veronii B565]
          Length = 574

 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  +I + +R    N G   +  P+++ ++ L +     D  
Sbjct: 31  MIRKLASGMYAWLPTGLRVLKKIENIVREEMNNAGAVEVSMPVVQPAE-LWQESGRWDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L D   +   L     ++   L RY   ++  +       +  
Sbjct: 90  GPELCRLTDRHNRPFVLGPTHEEVITALVRYEVNSYKQLPLNLYQIQTK 138



 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M        + Q +   L+ AG+   +F    +  G      +    P AI+ G    
Sbjct: 483 MNMHKSERVAEQAQQFYAELKAAGVDV-LFDDRKERPGVMFADMELLGIPHAIVIGDRGL 541

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G+++ K    G++    I +  +  +A+
Sbjct: 542 DNGVVEYKCRRTGEKQEVAISDIIAMLKAK 571


>gi|319638108|ref|ZP_07992872.1| prolyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400753|gb|EFV81410.1| prolyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 570

 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 72/568 (12%), Positives = 157/568 (27%), Gaps = 100/568 (17%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENIVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEVNSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +   ++     +   + 
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDAYCRIFTRLGLEFRPVAADTGSIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE     S + TK      + 
Sbjct: 204 GTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAAAQS-ELTKVHTPNVKT 262

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           I+ +V FL+I +E+++                     HE  ++    +AG K    +   
Sbjct: 263 IESLVEFLNIPVEQTLKSIVVEGENEGELVLLLLRGDHEFNDIKAEKLAGVKSPLTMASP 322

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +V + G N   +       +   ++ T    + I+G    +       FG       +
Sbjct: 323 AAIVEQFGANGGSLGPVGFKGKVYADFATEKGADWIIGANEDDYHYTGFNFGRDAAEPEF 382

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 383 VDLRNVIEGDISPDEQGRLKLARGIEVGHVFQLRDKYAKAMNVSFLDNNGKSQIMEMGCY 442

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M P  +  +  +                 L  AG
Sbjct: 443 GIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAGLLAAG 502

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
               +     +  G  L  ++    P  I+ G      G +                   
Sbjct: 503 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNV------------------- 542

Query: 465 SWREARVAQ-ITIPISELVSTVKKILQE 491
            + E R  Q   + +SE+V+ V   L+ 
Sbjct: 543 EYAERRDNQAQAVAVSEVVAKVLAALKA 570


>gi|302866733|ref|YP_003835370.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302569592|gb|ADL45794.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 672

 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 19/118 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    +       +   LR  GIRAE+ LG  +    +++ A ++  P  +
Sbjct: 562 WLAPVQVVGIPIRDEHGDYLVDFAATLRRHGIRAEVDLGDER-MQKKIRNAQQQKIPFMV 620

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           I G  + + G +  +    G + +                  +P+ E V+ V+++++ 
Sbjct: 621 IAGDDDVAAGTVSFRY-RDGSQRNG-----------------VPVDEAVAHVREVVES 660


>gi|220931402|ref|YP_002508310.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992712|gb|ACL69315.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 646

 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 69/218 (31%), Gaps = 4/218 (1%)

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                EK  +      E   K     +++ I      G   + G   +         E  
Sbjct: 429 DPDNREKYIDNPTAWEESQDKMKNILDKLNIDYVEAEGEAAFYGPKLDIQFRNVHGKEDT 488

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGP 377
              V        R+D        +          S+G     +A+   + +      + P
Sbjct: 489 IITVQIDFALPERFDMTYIDKDNKKKRPYVIHRTSVGCYERTLAMLIEKYAGAFPTWLAP 548

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +    D +        +L+ AGIR E+   +++  G +++ A     P  +I G 
Sbjct: 549 VQVEIIPVSDDQVDYAYEVKGILKEAGIRVEVD-DTNEKLGYKIRQAQMEKIPYMLIVGN 607

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            E     + ++D  +G   +  IK  +      V + +
Sbjct: 608 REVENRTVSVRDRKEGDLGAISIKEFKEKIVREVEEKS 645



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 65/222 (29%), Gaps = 10/222 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   + +  E  G+   +TP +  SD   K     D   + +F L
Sbjct: 263 GLPLLKPKGAKVVQILQRFVEDEEEKRGYQLTKTPYMAKSDLY-KISGHWDHYKEDMFIL 321

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
            D   D + ++LR  +T P        F       R+YR  P+  +E     R     + 
Sbjct: 322 GDEEKDDEVLALRP-MTCPF------QFMIYNSKLRSYRDLPLRYSETSTLFRNEASGEM 374

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      ++  +        E      N  +  +    I D I  +      D   
Sbjct: 375 HGLIRVRQFTISEGHIICTPEQLEEEFRGVVNLINYMMETLGIEDDIWYRFSKWDPDNRE 434

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +    A ++        +  L  +           G  L 
Sbjct: 435 KYIDNPTAWEESQDKMKNILDKLNIDYVEAEGEAAFYGPKLD 476


>gi|34558342|ref|NP_908157.1| ATP phosphoribosyltransferase regulatory subunit [Wolinella
           succinogenes DSM 1740]
 gi|46395709|sp|Q7MQS0|HISZ_WOLSU RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|34484061|emb|CAE11057.1| hypothetical protein WS2057 [Wolinella succinogenes]
          Length = 286

 Score = 70.3 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 6/113 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+P+G      K  R++ RI +    I    GF+ I TP   + +         D  
Sbjct: 5   LEHEIPQGSQLYFGKSARLKRRIEERASQILYTAGFEEIITPSFSFLE------HQRDTS 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           ++ V  L ++    I+LR D T  + R + +         R + I PVF    
Sbjct: 59  SREVLRLSNEKNHQIALRNDTTLDVVRIITKRLGRSTEHRRWFYIQPVFSYPT 111


>gi|315122709|ref|YP_004063198.1| prolyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496111|gb|ADR52710.1| prolyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 453

 Score = 70.3 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 53/480 (11%), Positives = 130/480 (27%), Gaps = 71/480 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  +T + ++  +G         +  +++   IR   +  G   +  P L+ +D   +  
Sbjct: 25  MMLRTGMISQHSKGMYSWLPLGNKALSKVNAIIREEQDRIGALEMSNPTLQSADLWIES- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPV--- 114
              +   K +  + D + + +       ++   + R   +++  +       ++      
Sbjct: 84  GRYESYGKEMLRIVDRNDKSMLYGPTNEEMMTDIFRSHVKSYRDLPLILYQMQLKFRDEL 143

Query: 115 -FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
             R        F        D     +  +  +M +        +G+K            
Sbjct: 144 RPRFGTMRSREFLMKDAYSFDLTFEDSVHSYNKMFVSYLRIFHRLGLKSIPMRAESGPIG 203

Query: 174 -ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
             L      +   G+ +L      +      +      +                     
Sbjct: 204 GSLSHEFIVLSNTGETQLFCSKDFMNFPIPSENTDFDDIV-------------------- 243

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
               +  +V   +     +     E +  +++ E                      +   
Sbjct: 244 ---SLKDIVRQWTTPYAATSDVHNEKLFHSLSEEDRI-------------------VARG 281

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
             +     + T   +     F   + K+  V  GS G G             +     + 
Sbjct: 282 IEVGHIFHFGTKYSHPMSATFQGADGKKHYVQMGSYGIGPMRVVAAIIESSHDAQGIIWP 341

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
             +S   ++L +L+                                 L  AG   ++FL 
Sbjct: 342 DSVSPFHISLINLKIHDQACCSASD-----------------KIYTQLSQAG--CDVFLD 382

Query: 413 S-SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
              +  G++   AD    PL II G+   S   ++IK+ + G +    ++   ++   R 
Sbjct: 383 DVDEQAGSKFALADLLGFPLQIIIGSKFISDSKVEIKNRSTGTKEYMSLEEVVNYASNRF 442


>gi|288920333|ref|ZP_06414645.1| threonyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288348281|gb|EFC82546.1| threonyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 658

 Score = 70.3 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 46/409 (11%), Positives = 111/409 (27%), Gaps = 49/409 (11%)

Query: 90  PLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
              R V E       I           + +++ +       +    +         AD  
Sbjct: 288 GAIRTVMEDYSRRRHIEAGYEFVNTPHITKSDLYEISGHLDWFADGMYPPMQLDGGADYY 347

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  M       +   R   +  +  R    G + +    G      R+  L   D     
Sbjct: 348 LKPMNCPMHILIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFC 407

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
             + +   L     D+   F  G        D  +   +    K++    E  + T    
Sbjct: 408 AREQLPEEL-----DSVLKFVLGLLRDYGLEDFYLELSTRPEGKAIGSDEEWAEATELLR 462

Query: 267 KG--FNELVVISELVR-KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKP 322
           +     +L ++ +            ++    I R  +  T    ++    F +  +    
Sbjct: 463 EAASKQDLELVMDEGGGAFYGPKISVQAKDAIGRTWQLSTIQVDFQLPQRFDMTYQAADG 522

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                                  +    F        + L+    +      + PV +  
Sbjct: 523 TRQRPFM----------------IHRALFGTIERFFAILLEHYAGALPPW--LAPVQVVG 564

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +    + +         LR  GIR E+     +    +++ A ++  P  ++ G  + S+
Sbjct: 565 IPITDEHVPYLADVAAKLRERGIRVEVDSSDDR-MQKKIRTAQKQKVPFMLLAGDEDVSK 623

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           G +  +    G + +                  +P+ E V+ +  +++ 
Sbjct: 624 GAVSFR-FRDGTQRNG-----------------VPVDEAVAEILDVVER 654


>gi|84490351|ref|YP_448583.1| threonyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|121731075|sp|Q2NE13|SYT_METST RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84373670|gb|ABC57940.1| ThrS [Methanosphaera stadtmanae DSM 3091]
          Length = 614

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/331 (8%), Positives = 82/331 (24%), Gaps = 30/331 (9%)

Query: 144 DAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI--- 200
             E+ +  A    A  I  + +    N    +  +               L  LRA    
Sbjct: 282 HRELMLRFACCFGAFRILADSFLTWKNMPVGIYELSTFSFRFERQGEVVGLKRLRAFTMP 341

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D             +   + D         ++  E    +      + E  + E+ +   
Sbjct: 342 DFHSVCLNDDHAREVFANQVDMCAQTETDLDVHYEVAFRVTQDFFDENEDWIKEVVKNNI 401

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                 +   ++              +  +        ++  +   +          ++ 
Sbjct: 402 KKPVLLEVIPKMKHYWNAKVDFAAIDDLGRPIENPTVQMDIQSAKRFGITYLDENEEQQY 461

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK----SLESSTNNIKEMG 376
             +                      +  +        +   L+       +  +    + 
Sbjct: 462 PTI----------------------LHCSPTGSIERVICSLLEKTSTDKGNKPSLPLWLA 499

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +    + L   +   Q +R + IR ++   + +  G +++ A +   P  I+ G
Sbjct: 500 PTQVRIIPVTDNHLDYAKEIYQQIRDSNIRVDIDDTAER-VGKKIRNAGKEWIPYTIVVG 558

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWR 467
             E     + +       +    I++     
Sbjct: 559 DNEVENNSISVNRRVDNTKEEISIEDLAEEI 589


>gi|301168478|emb|CBW28068.1| proline tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 573

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 65/538 (12%), Positives = 143/538 (26%), Gaps = 86/538 (15%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R   ++   IR   +  G   I   ++   + L +     D     +  
Sbjct: 37  SGLYSYLPFGYRSIRKVEQIIREELDKAGCHEILMSMVTPGE-LWQESGRWDAMGDQMLK 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++D  G+ + L     +    + R   +++  +      Y+I   FR+E        +  
Sbjct: 96  VKDKGGRDLCLSPTNEEAVTDIFRKTIKSYKNLP--VTLYQINTKFRDELRPRFGLMRGR 153

Query: 130 QCDV--DNVGSSAETADAEMCMMMADTLEAVGIKRN----------------DYHIGINN 171
           +  +         + +  E+   +    EA+  +                  D       
Sbjct: 154 EFTMKDGYSFHIDKDSLDEVYDRIFKAYEAIFTRAGLEFSAVEADAGAMADSDQKTHEFQ 213

Query: 172 RKILDGILEKIGLHG---------------------------DDKLNERLIVLRAIDKLD 204
                G  E I  +                              +      +    D L 
Sbjct: 214 VIANTGEDEVIYCNETGYAANIEKAQTKRGKLQFDLSASEVTRVETPNMGTIESVCDFLK 273

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID--IMVSFLSIDLEKSMHELYELVKGT 262
               Q +K L+ +    +  +      L  + ++   + +FL  D  +   +   L +G 
Sbjct: 274 VPKEQSIKSLVYKSTIGDEEETVLVLLLGDDSLNEIKLNAFLKADNLRPATDSEMLSEGF 333

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC------VYEA------- 309
             G  G ++L   ++++  S  N +    +        Y           +E        
Sbjct: 334 TKGYIGPHKLSAKAKIIFDSAVNLDAYYCAGANEENAHYKGINPKRDVESFEVADLRLAM 393

Query: 310 ----------ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
                     ++      E       G          ++        P  G        +
Sbjct: 394 KGDLTLDEKGVVDIRRGIEVGHIFQLGDKYTKAMGTTVLDSNGKAMNPLMGCYGIGVTRV 453

Query: 360 VALKSLESSTNNIKEMGP----VLITTMDHDSDSLSKYQM--YTQMLRTAGIRAEMFL-G 412
           VA    +   +             +   +    + +K         +  A I        
Sbjct: 454 VAAAVEQHHDDKGIVWPMALAPYHVYFAEITKSAENKELAEKIYNEILEANIEVVFDDRK 513

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSR-GMLQIKDLAKGKELSREIKNNESWREA 469
           +   F    K AD    PL ++ G  +  + GML+I+    G+ L  + ++  S  + 
Sbjct: 514 AGPGFK--FKDADLLGLPLQLVFGERDFKKDGMLEIRIRKTGESLKVKPEDVVSKLQE 569


>gi|311064741|ref|YP_003971466.1| prolyl-tRNA synthetase ProS [Bifidobacterium bifidum PRL2010]
 gi|310867060|gb|ADP36429.1| ProS Prolyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 616

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 34/108 (31%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +   +     V +     D+ +    +     L   GI          + G + K
Sbjct: 502 DERGLAWPAVIAPAQVHVVATGKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGVKFK 561

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            A+    PL  + G    + G ++I++      ++  + +      +R
Sbjct: 562 DAELIGVPLIAVAGRDTVNNGTIEIRNRDSSDSVAVPVADAAQTLASR 609



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +++ N+I   +R   +  G   +  P L   E  ++  +     +   + +F L+
Sbjct: 57  WLPLGLKVLNKIEAIVREEIDGIGAQEVHFPALLPREPYEATHR----WEEYGENLFRLK 112

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 113 DRHEADYLLAP 123


>gi|38569901|gb|AAR24471.1| predicted threonyl-tRNA synthetase [uncultured crenarchaeote
           DeepAnt-EC39]
          Length = 616

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 48/398 (12%), Positives = 101/398 (25%), Gaps = 39/398 (9%)

Query: 96  AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL 155
             N+  I               E +      +    D +        A      +MA   
Sbjct: 240 IRNYGGIEVETPIMYDSHHPSMESYFNRFPARQYSIDSEGKHLFLRFAACFGQFLMASDF 299

Query: 156 EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
             +  K   Y +    R           +         +    A  K     +   +   
Sbjct: 300 -QLSYKNLPYKLYELTRYSFRREQSGELVGLRRLRAFTMPDCHAFCKDMSQAIDEFRKRF 358

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK--GTIAGEKGFNELV 273
                D S +   G  +     ++ + F      ++   + +LV   G     + + E  
Sbjct: 359 -----DLSREVLSGLGIEENDYEVGIRFTEDFYNENKDLIKQLVSKVGKPVLIEMWKEKF 413

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
               L  +  +  N  K SS     ++   G  Y                          
Sbjct: 414 FYFVLKWEFNFIDNLGKASSLSTDQIDVENGKRYGITFT--------------------- 452

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSL------ESSTNNIKEMGPVLITTMDHDS 387
            D    +     +  +        +   L+                 + P+ +  +    
Sbjct: 453 -DEKNEQQHPIILHNSPSGAVERVIYALLEKSAMQIKDGKIPQFPLWLAPIQVRLIPLKD 511

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           D L         L    IR ++   +    G +++ A++      ++ G  E +   L +
Sbjct: 512 DFLEFASNLASKLTEQNIRVDIDDRND-TIGKRIRDAEKEWINYVLVIGEKEMNSSSLSV 570

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           +D   G       ++     +   +    P S+L STV
Sbjct: 571 RDRTTGDVRQLSTEDFVKEIQDATSGK--PTSKLNSTV 606


>gi|311744140|ref|ZP_07717946.1| proline--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313270|gb|EFQ83181.1| proline--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 593

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 2/112 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQL 421
             L            V +     D             LR AG+         K + G + 
Sbjct: 475 DDLGIVWPRALAPYDVHLIAAGKDEAVHLGAARLYDELRAAGLDVLFDDRPGKISLGVKF 534

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K A+    P  ++ G G  + G++++KD A G      + +      A V +
Sbjct: 535 KDAELLGMPTIVVVGKG-FADGVVEVKDRATGDRSDVPVDDLVELLSASVRE 585



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  R+   +R   E  G   +  P L   E  ++  ++          +
Sbjct: 38  GIYSWLPLGLKVLARVEAIVREEMEAIGAQEVRFPALLPREPYEASNRWTE----YGPNL 93

Query: 71  FSLQDDDGQWISLRY 85
           F L D  G  + L  
Sbjct: 94  FRLTDRKGADLLLGP 108


>gi|313141032|ref|ZP_07803225.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133542|gb|EFR51159.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 596

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 34/108 (31%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +   +     V +     D+ +    +     L   GI          + G + K
Sbjct: 482 DERGLAWPAVIAPAQVHVVATGKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGVKFK 541

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            A+    PL  + G    + G ++I++      ++  + +      +R
Sbjct: 542 DAELIGVPLIAVAGRDTVNNGTIEIRNRDSSDSVAVPVADAAQTLASR 589



 Score = 42.1 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +++ N+I   +R   +  G   +  P L   E  ++  +     +   + +F L+
Sbjct: 37  WLPLGLKVLNKIEAIVREEIDGIGAQEVHFPALLPREPYEATHR----WEEYGENLFRLK 92

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 93  DRHEADYLLAP 103


>gi|224283879|ref|ZP_03647201.1| prolyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|310287860|ref|YP_003939118.1| prolyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251796|gb|ADO53544.1| prolyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 599

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 34/108 (31%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +   +     V +     D+ +    +     L   GI          + G + K
Sbjct: 485 DERGLAWPAVIAPAQVHVVATGKDAAAFDAAEKLVAELEERGIEVIYDDRKKVSPGVKFK 544

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            A+    PL  + G    + G ++I++      ++  + +      +R
Sbjct: 545 DAELIGVPLIAVAGRDTVNNGTIEIRNRDSSDSVAVPVADAAQTLASR 592



 Score = 42.1 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +++ N+I   +R   +  G   +  P L   E  ++  +     +   + +F L+
Sbjct: 40  WLPLGLKVLNKIEAIVREEIDGIGAQEVHFPALLPREPYEATHR----WEEYGENLFRLK 95

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 96  DRHEADYLLAP 106


>gi|328869850|gb|EGG18225.1| putative protein serine/threonine kinase [Dictyostelium fasciculatum]
          Length = 1649

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 87/566 (15%), Positives = 177/566 (31%), Gaps = 125/566 (22%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLL------EYSDSLGKF---------------- 59
            +I+IR  + + I  I + +    + TP++      E   S GK                 
Sbjct: 1013 DIQIREMVNEIIVTILKKHSAIELTTPVMNIIHQWEDKTSGGKKDKKPSTAQQLQQPLSG 1072

Query: 60   -------------LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENF------- 99
                            +D+ +K +  + DD GQ   LR+DL      Y+AE+F       
Sbjct: 1073 SKQKQHQQQQQQQQQQKDKLSKSM--MMDDSGQLFDLRFDLRNSFVDYLAEHFASSSARD 1130

Query: 100  ---------------------DTIVFPCRTYRIGPVFRNEKHG--PGRFRQFIQCDVDNV 136
                                   +       R        K        ++  QC  D V
Sbjct: 1131 QNSSSTRYEKKYGQGDNLEELLEMFSGQPLKRYEIGTVYRKPHLVGKPPKELSQCSFDIV 1190

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
            GS++   DAE+  +  +  +A+    N+Y + IN+  I+D +   +G+    + NE  IV
Sbjct: 1191 GSNSILTDAEVIKVTFEIFDAL-SSVNNYTVRINHTGIVDYMWRIVGITDPCQRNEVAIV 1249

Query: 197  LRAIDKLDKFGLQGV---KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            L  + +     ++ +   ++ L   + +   ++       ++ I  + S        S+ 
Sbjct: 1250 LSQLLRQPWTSIKKILLERMQLPPKQVERLANWVLVRGSITDVIKKLESTGGSGNSPSLG 1309

Query: 254  ELYELVKGT-------IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                L+ G+        +     +E+  +  L+ K G    R++     V   ++Y+G +
Sbjct: 1310 RGVGLLTGSQTNVRVSNSFGDFIDEMKQLGCLLDKMGLQFPRVQFDLGYVYNEDFYSGVM 1369

Query: 307  YEAILGFPVMNEKQKPVVFGSV---------------GGGGRYDGLVSRFKGQNVPATGF 351
            ++AIL      E    V                        +        +  +  ++  
Sbjct: 1370 FQAILKDDSRQETCIAVGGRYDRAVSKQIPLFFNQQQQQQQQQQQQQQPIRVSDSDSSVG 1429

Query: 352  SIGISRLIVALKSLESSTNNIKEMGPV------------------------------LIT 381
             I +  L +AL  +     +I     V                               I 
Sbjct: 1430 GISVCGLSIALDKIYHRERDIINRCYVSGSVPTIGSLPSTSGVTPSLLQPLKSYRSPEIF 1489

Query: 382  TMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
                   SL  +       L  AG + +     +     Q + A     P  +I      
Sbjct: 1490 VCSLGGSSLFVERIGIVSDLWNAGFKVDTIYRENPTPEEQTEQALNSGAPFIVILKEKSG 1549

Query: 441  SRGMLQIKDLAKGKELSREIKNNESW 466
             + ++++K++ K +E     +    +
Sbjct: 1550 KK-IIKVKNIEKKREEDIAREEVVKY 1574


>gi|284161285|ref|YP_003399908.1| threonyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011282|gb|ADB57235.1| threonyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 618

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 65/272 (23%), Gaps = 22/272 (8%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
                  +F     L+ E +  +     ID E     +          ++  + LV I  
Sbjct: 344 DMEQAKQEFFNQYKLSVEVLKGI----GIDPEDYEVAVRVTKDFYEQNKEFIHSLVDILR 399

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                     R                    A+    +  E  +      V   G     
Sbjct: 400 KPILVEMWDQRFFYFVLKFEFNFVDALEKASALSTVQIDVENAERYDISYVDENGEKKRP 459

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
           +      +         +                   + P  +  +      L +     
Sbjct: 460 LILHCSLSGAIERCMYALLEKAHMNMERGKLPMLPVWLSPTQVRVIPVSERYLDRAIEVA 519

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG--MLQIKDLAKGKE 455
             L   GIRA++     +  G +++ A R   P   + G  E   G   + I+       
Sbjct: 520 NELSRRGIRADVD-DRDETLGKKIRDAGREWIPYVAVIGEDEVKGGFLTVTIR------- 571

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKK 487
                            ++ + I EL   VKK
Sbjct: 572 --------AESTLKEQKRVKMSIDELAERVKK 595


>gi|254457348|ref|ZP_05070776.1| tRNA synthetase, class II [Campylobacterales bacterium GD 1]
 gi|207086140|gb|EDZ63424.1| tRNA synthetase, class II [Campylobacterales bacterium GD 1]
          Length = 282

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 19/235 (8%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+P G      K  + +  I +   +I +  GF+ I TPL  Y   L          
Sbjct: 3   LEHEIPNGSKLYFGKSAKAKRDIENIASDILDANGFEEIVTPLFSYHQHL------SIAD 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  + D     IS+R D T  + R + +         + + I PVF        +  
Sbjct: 57  EKKLIKVNDAKNNSISIRADSTIDVVRIIEKRLGRNTQHRKWFYIQPVFTYPTTEQNQIG 116

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                +              +  +  + L  + +K       I   KIL G+ +++ L  
Sbjct: 117 AEFMGEKKLSS---------VMNIANEILSKLDVKPLVQISNIKIPKILVGMFDELTLDD 167

Query: 187 DDKLNERLIVLRAIDK----LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
              +N    +   ++     +    ++ +  LL         +  K   L+ E  
Sbjct: 168 FRHINIEKFLNLKVEWFEKLIYLQYVEQIDELLEIVPESIKIELLKMKELSVETA 222


>gi|323341796|ref|ZP_08082029.1| proline--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464221|gb|EFY09414.1| proline--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 569

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 65/526 (12%), Positives = 143/526 (27%), Gaps = 72/526 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        ++++N+I + IR          +  P L   D         D     +F 
Sbjct: 45  SGVYMYMPLGLKVKNKIENIIREEMNAIDAQEMTMPTLIPEDVYVAS-GRRDIIGTSMFQ 103

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           L D   +   L     +L A  A+    ++  + F    ++                +  
Sbjct: 104 LDDRFKKPFVLGPTHEELFAQAAQMKIRSYKDMPFSLYQFQTKFRDEARPRFGLIRVREF 163

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLHGDD 188
                    +   +  +    M +  + +  +   DY I   +  I+ G+L +      D
Sbjct: 164 VMKDSYTFDADLESADKSYDAMFEAYKRIFDRVGLDYRIVRADTGIMGGLLSEEFQAVTD 223

Query: 189 --KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS---- 242
             +    L          +      ++   E        +T  A    E  + +      
Sbjct: 224 IGEDILVLGEETGYSSNLEVAENVYRIQSDEPFLSKEKVYTPNARTIEEVAEFLKQPVQK 283

Query: 243 --------------FLSIDLEKSMHELY--ELVKGTIAGEKGFNE--------------- 271
                          + +  ++ ++E    +L K T      F                 
Sbjct: 284 FVKTLIYRLDDQYVAVCVLGDRDVNETKLAKLYKATEVELADFEHVQKHTGASVGFAGPV 343

Query: 272 -LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG---- 326
            L +   + +      N    ++             +EA     V N K+          
Sbjct: 344 GLEIDVVVDKMIEGLRNFTVGANENDHHFINVNHSDFEATHIIDVSNVKEGDPNPDGKGV 403

Query: 327 -----------------SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES-- 367
                                    + L    K Q+V    + IG+ R + A+    +  
Sbjct: 404 LTFSKGIEVGNTFKLGTKYSKAMGLEYLDQNNKLQDVYMGSYGIGLGRTLAAVVEQNNDE 463

Query: 368 ----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                  N+      ++   + + + ++      Q L  AG+   +     +  G +   
Sbjct: 464 NGIVWPMNLAPFQVAIVVINNKNEEHMAFADDLYQELSQAGLEVILD-DRKQRPGIKFND 522

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            D    PL I  G      G +++K+   G E   + ++  +  ++
Sbjct: 523 MDLIGVPLRITVGRD-VEHGEVELKERKSGNEQKIKREDILNVLKS 567


>gi|85707814|ref|ZP_01038880.1| ATP phosphoribosyltransferase [Erythrobacter sp. NAP1]
 gi|85689348|gb|EAQ29351.1| ATP phosphoribosyltransferase [Erythrobacter sp. NAP1]
          Length = 382

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 3/150 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D            + +  +   ++G+D +  PLLE+  +L   +       +  
Sbjct: 19  LPVGLEDRLPASAARITAAMRACLDALGSHGYDRVRPPLLEFETALAARMEG--VATRRT 76

Query: 71  FSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           F + D    + ++LR D+T  + R  + +  +   P R    G     +       R+ +
Sbjct: 77  FRMVDPASLRTLALRSDITPQIGRIASTSLASAPRPLRLAYCGDTALIQASQLDPARERL 136

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           Q   + +G+    A  E+  +  + L A G
Sbjct: 137 QLGAELIGADTVEAAGEIVSLAIEALGAAG 166


>gi|269217138|ref|ZP_06160992.1| proline--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129275|gb|EEZ60360.1| proline--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 569

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +R+ N++   IR   +++G   I  P ++ SD L +         + +  
Sbjct: 35  SGLYSFLPLGMRVLNKLESIIREEMDSHGAQEILMPFVQSSD-LWRESGRWGAYGEEMLR 93

Query: 73  LQDDDGQWISLRY 85
           + D  G    L  
Sbjct: 94  MADRHGNEFCLGP 106



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AG+   +     +  G +    D    P+ ++ G      G++++KD A G++ S  + 
Sbjct: 500 DAGLEVVIDDRDERA-GVKFNDNDLIGWPVQVVVGKRGLKEGVVEVKDRATGEKESVALD 558

Query: 462 NNESWRE 468
              S  E
Sbjct: 559 QVLSAVE 565


>gi|194741986|ref|XP_001953490.1| GF17784 [Drosophila ananassae]
 gi|190626527|gb|EDV42051.1| GF17784 [Drosophila ananassae]
          Length = 1584

 Score = 70.3 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 65/479 (13%), Positives = 131/479 (27%), Gaps = 48/479 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL                N     L    G  + L 
Sbjct: 966  VIEFVKAKVVNLFRKHGAIEVDSPLLSPLS----SRNSSAHANANAVHLMTHSGCVVVLP 1021

Query: 85   YDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N   ++               N          F            + 
Sbjct: 1022 CDLRTQFARHVTMNGVNLIRRYCVDRVYREEKVFNFHPKQNYECSFDIIAPTPGSHLVDA 1081

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   +   L  +  +  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1082 ELLSLAFEITSELPRL--RERNITIRMNHTNLLRAILIYCNVPKSHYGTLFEGTMDFIES 1139

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      + +   ++  S        L +  +    S +     K++          
Sbjct: 1140 RISRFQFHSSITVIMEKSRTSAQTLMDMLLANFLLTGSRSSVDDSALKTLMRGKGEAASL 1199

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G     EL  +  L    G       I       + +        +       +  + 
Sbjct: 1200 ARG--ALRELETVVGLAYSLG---VTCPIHIWAGLPISFERASTGGIVWQMTADLKPNRS 1254

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNV---PATGFSIGISRLIV------ALKSLESSTNNIK 373
                 +  G RYD ++  F+ Q     PA      +S   +       + ++        
Sbjct: 1255 GHPSVLAVGERYDAMLHEFQRQAQSFNPALPTRSVLSGAGLSFSLDKLVAAVGVEYAKDC 1314

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG--NQLKYADRRNCPL 431
                V I         L       ++L + GIR  +   ++   G   Q   A R     
Sbjct: 1315 RAIDVGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIV-EAASELGDEAQ-DLA-RLGALH 1370

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
             I+        G L+++                S+   R  +  +  +ELV  V+K+L+
Sbjct: 1371 VILVAE----NGSLRVR----------------SFERERFQERHLNRAELVEFVQKLLR 1409


>gi|325132465|gb|EGC55158.1| prolyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 599

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 62/522 (11%), Positives = 141/522 (27%), Gaps = 80/522 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 55  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 112

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 113 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 172

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +    +     +   + 
Sbjct: 173 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLGLAFRPVAADTGSIG 232

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       + TK      + 
Sbjct: 233 GTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERTA-AQAELTKVHTPNVKT 291

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           I+ +V FL+I +E+++                     HE  ++    +AG K    +   
Sbjct: 292 IESLVEFLNIPVEQTLKSIVVESENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASS 351

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +V + G N   +       +   ++ T    + ++G            FG       +
Sbjct: 352 AAIVEQFGANGGSLGPVGFKGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEF 411

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 412 VDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 471

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M P  +  +  +                 L  AG
Sbjct: 472 GIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAG 531

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
               +     +  G  L  ++    P  I+ G      G ++
Sbjct: 532 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNVE 572


>gi|325128468|gb|EGC51349.1| prolyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 570

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 62/522 (11%), Positives = 142/522 (27%), Gaps = 80/522 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +   ++     +   + 
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLGLEFRPVAADTGSIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       +  K      + 
Sbjct: 204 GTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERAA-AQAELVKVHTPNVKT 262

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           I+ +V FL+I +E+++                     HE  ++    +AG K    +   
Sbjct: 263 IESLVEFLNIPVEQTLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASP 322

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +V + G N   +   S   +   ++ T    + ++G            FG       +
Sbjct: 323 AAIVEQFGANGGSLGPVSFAGKVYADFATEKGADWVIGANEDGYHYTSFNFGRDAAEPEF 382

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 383 VDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 442

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M P  +  +  +                 L  AG
Sbjct: 443 GIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAG 502

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
               +     +  G  L  ++    P  I+ G      G ++
Sbjct: 503 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNVE 543


>gi|167627536|ref|YP_001678036.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189083499|sp|B0TXX4|SYP_FRAP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167597537|gb|ABZ87535.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 565

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 55/538 (10%), Positives = 143/538 (26%), Gaps = 78/538 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R      G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPIGLKVLQKIQNIVREEMNKAGASELLLPSVLPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L+D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLKDRHERDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IK 161
             R        F                    +M     + L+ +G            I 
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSECLHNTYNKMHETYCNILDKIGLVYRPVRADTGAIG 203

Query: 162 RNDYHIGINNRKILDGILEK-----------IGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
            ++ H         + I+             +  +    L+ R +    I K+    ++ 
Sbjct: 204 GDNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKPDLSTRAVSENTITKIHTPNIKT 263

Query: 211 VKLLLGEGRTDNSGDFTK-----------------GANLTSEQIDIMVSFLSIDLEKSMH 253
           ++ L  E   D                           L   +I+ +   ++     +  
Sbjct: 264 IEKLCTELDFDIKKTIKTMVIKDAKGNFFALVIRGDHELNETKINKLEQIVAPYTLATKD 323

Query: 254 ELYELVKGTI--------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E++ +               +   +   ++ E +       +    +    R +  Y   
Sbjct: 324 EIFSIFNANPGSLGIVNCPVQIIADYSAMMIEDICCGANEDDYHFTNVNWGRDITSYQIA 383

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKG------QNVPATGFS 352
               ++   +  +    +   +    G        Y   ++          + +    + 
Sbjct: 384 DIRNVVTGDISPDNNGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCYG 443

Query: 353 IGISRLIVALKSL-----ESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGI 405
            G+SR++ A                     V I  ++++             Q L   GI
Sbjct: 444 FGVSRVMAAAIEQSHDENGIIWPETIAPYQVAILPINYNKSESVKQTADKLYQELLVKGI 503

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +    ++  G     AD       ++ G     +G+++ K+    ++    ++  
Sbjct: 504 DVILDDRGAR-PGVMFADADLIGFSHHVVIGDRLLEQGLVEYKNRKTQEKQEIRLEKL 560


>gi|158424741|ref|YP_001526033.1| ATP phosphoribosyltransferase regulatory subunit [Azorhizobium
           caulinodans ORS 571]
 gi|158331630|dbj|BAF89115.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Azorhizobium caulinodans ORS 571]
          Length = 438

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 128/376 (34%), Gaps = 53/376 (14%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           +++   + + GF  ++ P+L+ +D+      +  R +  +F    +DGQ + LR DLT P
Sbjct: 74  EALMARFASAGFLRLDPPILQPADAFLDLSGETIRRS--MFLTSGEDGQELCLRPDLTIP 131

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS----------- 139
           +AR V      +  P     +GPVFR+   G G FRQ          ++           
Sbjct: 132 VAREV--QRLHLPMPAAVSYLGPVFRSHSGGAGEFRQAGVESFGRADTAAADADILALGL 189

Query: 140 AETADAEMCMM---------MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              A   +             +  LEA+ +        + +        +   L   +  
Sbjct: 190 ETCAIYGVPDPEILIGDVGLFSAVLEALPLAPAWRRRLMKDFGQGRLDEDIANLSESEAK 249

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN------------------SGDFTKGANL 232
               +    +  L        + L+ +  +                         +G  L
Sbjct: 250 GTAAVHAGVLSALAGSDPDAARALITDLLSIAGITTVGGRTVSEIAARFLEQAALEGNGL 309

Query: 233 TSEQIDIMVSFLSIDL--EKSMHELYELV-KGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           ++E   I+  +L+I      ++ ++  L  +  I            +  +   G N + +
Sbjct: 310 SAETAAILSRYLAITGAPGPALEQVRALANEARIDISGALAAFEERASHLAAHGVNLSEV 369

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           + S+   R L+YY+G V+E       +           +  GGRYD L+SR   + V   
Sbjct: 370 EFSAAFGRPLDYYSGMVFELSDPEGRVAA--------PLVAGGRYDRLMSRLGAETVVPA 421

Query: 350 GFSIGISRLIVALKSL 365
                    +  L+S 
Sbjct: 422 VGFAAWVERLALLESQ 437


>gi|159899369|ref|YP_001545616.1| threonyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892408|gb|ABX05488.1| threonyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 604

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 62/455 (13%), Positives = 120/455 (26%), Gaps = 74/455 (16%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   +R+ +   +R      G+ P+ TP +   D                       
Sbjct: 221 WLPKGAILRDVLERFLRQAQIERGYLPVVTPHMGKIDLYKT------------------S 262

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G W + R D   P  R                        E      +            
Sbjct: 263 GHWYTYR-DGIFPPMR-----------------EIENDDTENPEGEIYLLKPMNC--PHH 302

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                ++      +   L   G           +   L G+L       DD       + 
Sbjct: 303 IEIYASEPRSYRDLPLRLAEFGT-----VYRYEHSGELTGLLRVRSFTVDD-----SHLF 352

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+L+   L+ V L+L    T    DF     L        +          + E  +
Sbjct: 353 VTPDQLEAEFLKVVDLILFVFGTMGLKDFQARVGLREVGNPKYI------GSDEVWEKAQ 406

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                 A +KG N +VV  E                 + R  +  T    +     P   
Sbjct: 407 NAIINAAEKKGLNYIVVEGE--AAFYGPKLDFIFRDVLGRQWQLGT---VQVDYNLPERF 461

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           E +     G               +   +    F      +   ++    +      + P
Sbjct: 462 EIEYTGEDGQK------------HRPIMIHRAPFGSIERFVGTLIEQYAGAFPVW--LAP 507

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +T +      ++  +     L   G+R E+   +++    +++ A +   P  ++ G 
Sbjct: 508 VQVTLVPITDRHVAYAESVAAKLNAQGLRVEVDASNNR-MNAKIRDAQKLKIPYMLVVGD 566

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            E   G + ++  + G   S  +    +  +  VA
Sbjct: 567 KEEEAGAVAVRQRSGGDLGSISVDEFIARIKDEVA 601


>gi|319410604|emb|CBY90973.1| prolyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
          Length = 599

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 60/522 (11%), Positives = 140/522 (26%), Gaps = 80/522 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 55  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 112

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 113 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 172

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +   ++     +   + 
Sbjct: 173 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLGLEFRPVAADTGSIG 232

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       +  K      + 
Sbjct: 233 GTGSHEFQVLAESGEDVIAYSDTSDYAANVELAPTLPLKGERTA-AQAELVKVHTPNVKT 291

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           I+ +V FL+I +E+++                     HE  ++    +AG K    +   
Sbjct: 292 IESLVEFLNIPVEQTLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASP 351

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +V + G N   +       +   ++ T    + ++G            FG       +
Sbjct: 352 AAIVEQFGANGGSLGPVGFAGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEF 411

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 412 VDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 471

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M    +  +  +                 L  AG
Sbjct: 472 GIGITRVVAAAIEQNNDEKGIIWTKAMASFEVVIVPMNYKKSDTVREAADKIYAELLAAG 531

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
               +     +  G  L  ++    P  I+ G      G ++
Sbjct: 532 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNVE 572


>gi|302332869|gb|ADL23062.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 567

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 66/542 (12%), Positives = 142/542 (26%), Gaps = 81/542 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E      I  P L+ ++ L +    
Sbjct: 28  KSGLIKQST-SGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  LQD  G+  +L     +L   + R   +++  +       +         
Sbjct: 86  WGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E      ++   Q            A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGS 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------R 198
                 A+     D  +          I +   ++  +  +  +  L             
Sbjct: 206 HTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELY 256
             D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+ 
Sbjct: 266 LADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           I+  + R         +
Sbjct: 324 NLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVPAT------GFSIG 354
             IL    +++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+              ++      LI+      D                    
Sbjct: 444 ISRTLSAIVEQNHDDNGIVWPKSVSPFDVHLISINPKKDDQRELADQLYAKF-NEKFDV- 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    PL I+ G    S G++++K+   G      I +  +   
Sbjct: 502 LYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVIT 560

Query: 469 AR 470
            +
Sbjct: 561 NK 562


>gi|281411733|ref|YP_003345812.1| prolyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281372836|gb|ADA66398.1| prolyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 577

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 50/523 (9%), Positives = 127/523 (24%), Gaps = 80/523 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I + +R      G   I  P+L+ ++ L K     D     +  L
Sbjct: 38  GIYTYLPLGRRVLLKIENIVREEMNRIGAQEILMPILQPAE-LWKQSGRWDDYGPEMMKL 96

Query: 74  QDDDGQWISLRY---DLTAPLA----RYVAE-----------NFDTIVFPCRTYRIGPVF 115
           +D   +  +L     ++   L     R   +             D I       R     
Sbjct: 97  KDRHERDFTLGPTHEEIVTDLVKNELRSYKQLPLTLYQIANKYRDEIRPRFGLLRAREFI 156

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
             + +      + +    +    +       + +         G    +          +
Sbjct: 157 MKDAYSFHASWESLDETYEQFKKAYSRIMERLGVRYMIIEAETGTIGGNASHEFVVPAKI 216

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
                        + ++     +     ++   + +K +   G      + ++   +   
Sbjct: 217 GETNVLFCEKCGYQASDEKAEYKGEYTQEQEEEKPLKKVPTPGVK-TIEEVSEFLGVPPS 275

Query: 236 QIDIMVSFLSIDL------EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           +I   + +   +          +      +K  +  +     +    E+++  G     I
Sbjct: 276 KIVKSLLYKGREGYVMVLIRGDLDLNEAKLKAHLKDQSL--RMATPEEILKDFGVPVGFI 333

Query: 290 KISSTIVRGLEYYTGCVYE-AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
                 V+ +  ++    +  ++G    +                +  L +  +G   P 
Sbjct: 334 GPVGVDVKKVADHSVRGLKNFVVGGMEEDTHYVNANHPRDFKVDEWYDLRTVVEGDPCPV 393

Query: 349 T------------------GFSIGISRLIVALKSLESSTN-------NIKEMGPVLITTM 383
                              G     +     +                        +   
Sbjct: 394 CGEPLKATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMGCYGWGVSRTMAAVVEH 453

Query: 384 DHDSDSLSKYQMYT------------------------QMLRTAGIRAEMFLGSSKNFGN 419
            HD + +                               Q+L   G    +      + G 
Sbjct: 454 FHDENGMIWPLSIAPYTVVVDILNMNDAEQKQIGELIYQVLSEKGEEVVLDDREV-SPGF 512

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           + K AD    P+ I  G      G++++K     + +   IKN
Sbjct: 513 KFKDADLIGFPIRINVGRS-LKEGVVELKKRYSKELVKVNIKN 554


>gi|261416474|ref|YP_003250157.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372930|gb|ACX75675.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 695

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 62/427 (14%), Positives = 118/427 (27%), Gaps = 39/427 (9%)

Query: 51  EYSDSLGKFLPDEDR-----PNKGV--FSLQDDDGQWISLRYDLTAPLARYVAENFDTIV 103
           E  ++  KFL + ++       K +  + ++D     +      T    + V    D I 
Sbjct: 286 EGLETYLKFLEEAEKRDHRKIGKEMDLYHIEDHSPGMVFWHPKGT----KMVNALKDYIR 341

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
                     V   E      + +    D  N       A         D   AV     
Sbjct: 342 GKIDRRGYLEVITPEIVNKTLWIKSGHADKYNENMFKTLAG--------DVEMAVKPMNC 393

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
             HI I N  +              +L E     R        GL  V+        D++
Sbjct: 394 PCHIQIFNTGLRS------WRDLPMRLAEFGKCHRYEPAGTMHGLMRVRG----FVQDDA 443

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
             F     + SE  D       I  +    ++            G +E+   +E      
Sbjct: 444 HIFCTEDQIASEVADFCALVKEIYHDFGFDDIVVKFSTRPEKRVGSDEIWDKAEAALAEA 503

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLV 338
                +        G  Y     +        +    +              G  Y G  
Sbjct: 504 TKLAGLDYILNPGEGAFYGPKLEF---TLKDSLGRDWQCGTIQVDFNLPQRLGAEYVGKD 560

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           ++     +        I R +  L   E   +    + PV    +      +   +   +
Sbjct: 561 NQKHIPVMLHRAAVGSIERFLGILIE-EFMGDFPLWLAPVQARVLPISEKFVDYAKQVEK 619

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L  AG+R E+   S++  G +++  + +  P  +I G  E + G++ ++    G + S 
Sbjct: 620 ELVNAGVRVEVD-ESNEKLGYKIRQCELQKVPYLLIVGEKEVADGVVSVRKRKDGDKGSM 678

Query: 459 EIKNNES 465
            +     
Sbjct: 679 TVAQFLE 685



 Score = 40.6 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K  ++ N + D IR   +  G+  + TP +    +L       D+ N+ +F 
Sbjct: 321 GMVFWHPKGTKMVNALKDYIRGKIDRRGYLEVITPEIVNK-TLWIKSGHADKYNENMFK 378


>gi|163744570|ref|ZP_02151930.1| ATP phosphoribosyltransferase regulatory subunit [Oceanibulbus
           indolifex HEL-45]
 gi|161381388|gb|EDQ05797.1| ATP phosphoribosyltransferase regulatory subunit [Oceanibulbus
           indolifex HEL-45]
          Length = 360

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 118/357 (33%), Gaps = 37/357 (10%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           +R I++  G   +E P+L+ +D+L     ++ R    V S      Q   LR D T P+ 
Sbjct: 14  LRAIFDAQGAVLVEPPILQPADTLLDLYGEDIRARAYVTSDALRGEQM--LRPDFTVPV- 70

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
             V  +      P R    G VFR ++H P R  ++IQ   +        A       + 
Sbjct: 71  --VQMHMAHGAEPARYTYSGEVFRRQEHDPNRANEYIQVGFEVFDRVDPAAADAEVFALI 128

Query: 153 DTLEA----------VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI-- 200
                          +G+          +      ++  I      +        R    
Sbjct: 129 AEAMHGLPVRPVTGDIGVLMAAVQGLGTSPARKQALMRHIWRPRRFRALLDRYAGRTPVP 188

Query: 201 ----------DKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSID-- 247
                     D +      G++     E R     +    A ++++Q+D+  + L I   
Sbjct: 189 AGRKALLANADAVCDAPKVGLRSQAEIEARVAALREDATTAPISAQQVDLFEALLEIKET 248

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           L  ++  L +L     A       +   +E +R  G +++ +   ++  R          
Sbjct: 249 LPNALSRLRDLAVDMPAIGDAVARVAARAEAMRARGIDTDALLFEASHGRS-------SM 301

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
           E   GF    +        ++  GGRYD L  R    +       +    L++ L++
Sbjct: 302 EYYDGFVFAFKANARPDLPNIASGGRYDALTRRLGQGDEIPAVGGVMRPGLMLELEA 358


>gi|170288224|ref|YP_001738462.1| prolyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|226701351|sp|B1L8Y1|SYP_THESQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170175727|gb|ACB08779.1| prolyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 577

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 53/527 (10%), Positives = 129/527 (24%), Gaps = 80/527 (15%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  +I + +R      G   I  P+L+ ++ L K     D     
Sbjct: 34  KTAAGIYTYLPLGRRVLLKIENIVREEMNRIGAQEILMPILQPAE-LWKQSGRWDDYGPE 92

Query: 70  VFSLQDDDGQWISLRY------------DLTA----PLARYVAENF--DTIVFPCRTYRI 111
           +  L+D   +  +L              +L +    PL  Y   N   D I       R 
Sbjct: 93  MMKLKDRHERDFTLGPTHEEIVTDLVKNELRSYRQLPLVVYQVANKYRDEIRPRFGLLRA 152

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
                 + +      + +    +    +       + +         G    +       
Sbjct: 153 REFIMKDAYSFHSSWESLDETYELFKEAYSRIMERLGVKYMVIEAETGAIGGNASHEFVV 212

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
              +             + ++     +     ++   +  K +   G      + ++   
Sbjct: 213 PAKIGETNVLFCEKCGYQASDEKAEYKGEYTQEQEEEKPFKKVPTPGVK-TIEEVSEFLG 271

Query: 232 LTSEQIDIMVSFLSIDL------EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
           +   +I   + +   +          +      +K  +  +     +    E+++  G  
Sbjct: 272 VPPSKIVKSLLYKGREGYVMVLIRGDLELNEAKLKAHLKDQSL--RMATPEEILKDFGVP 329

Query: 286 SNRIKISSTIVRGLEYYTGCVYE-AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
              I      V+ +  ++    +  ++G    +                +  L +  +G 
Sbjct: 330 VGFIGPIGVDVKKVADHSVRGLKNFVVGGMEEDTHYVNANHPRDFKVDEWYDLRTMVEGD 389

Query: 345 NVPAT------------------GFSIGISRLIVALKSLESSTN-------NIKEMGPVL 379
             P                    G     +     +                        
Sbjct: 390 PCPVCGEPLKATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMGCYGWGVSRTMAA 449

Query: 380 ITTMDHDSDSLSKYQMYT------------------------QMLRTAGIRAEMFLGSSK 415
           +    HD + +                               Q+L   G    +      
Sbjct: 450 VVEHFHDENGMIWPLSIAPYTVVVDILNMNDAEQKQVGEKIYQVLSEKGEEVVLDDREV- 508

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           + G + K AD    P+ I  G      G++++K     + +   IKN
Sbjct: 509 SPGFKFKDADLIGFPIRINVGRS-LKEGVVELKKRYSKELVKVNIKN 554


>gi|222099131|ref|YP_002533699.1| Prolyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254782923|sp|B9KBD7|SYP_THENN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|221571521|gb|ACM22333.1| Prolyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 577

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 55/523 (10%), Positives = 131/523 (25%), Gaps = 80/523 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I + +R      G   I  P+L+ ++ L K     D     +  L
Sbjct: 38  GIYTYLPLGRRVLLKIENIVREEMNRIGAQEILMPILQPAE-LWKRSGRWDDYGPEMMKL 96

Query: 74  QDDDGQWISLRY------------DLTA----PLARYVAENF--DTIVFPCRTYRIGPVF 115
           +D   +  +L              +L +    PL  Y   N   D I       R     
Sbjct: 97  KDRHERDFTLGPTHEEIVTDLVKNELRSYRQLPLVVYQVANKYRDEIRPRFGLLRAREFI 156

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
             + +      + +    +    +       + +         G    +          +
Sbjct: 157 MKDAYSFHSSWESLDETYELFKEAYSRIMERLGVKYMVIEAETGAIGGNASHEFVVPAKI 216

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
                        + ++     R    +++   + ++ +   G      + ++   +   
Sbjct: 217 GETNVLYCEKCGYQASDEKAEYRGEYPVEEEEEKPLEKVPTPGVR-TIEEVSQFLGVPPS 275

Query: 236 QIDIMVSFLSIDL------EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           +I   + F+  D          +      +K  +  +     L    E+++  G     I
Sbjct: 276 KIVKSLLFVGRDGYVMALIRGDLELNEAKLKSHLKDQSL--RLATPEEVLKDFGVPIGFI 333

Query: 290 KISSTIVRGLEYYTGCVYE-AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
               T V+ +  ++    +  ++G    +                +  L +  +G   P 
Sbjct: 334 GPIGTNVKKVADHSIKGLKNFVVGGMEKDTHYVNANHPRDFKVDEWCDLRTVVEGDPCPV 393

Query: 349 T------------------GFSIGISRLIVALKSLESSTN-------NIKEMGPVLITTM 383
                              G     +     +                        +   
Sbjct: 394 CGEPLRATKGIELGHIFKLGTKYSEAMEAYFMDENGEMKPFIMGCYGWGVSRTMAAVVEH 453

Query: 384 DHDSDSLSKYQMYT------------------------QMLRTAGIRAEMFLGSSKNFGN 419
            HD + +                               + L   G    +      + G 
Sbjct: 454 FHDENGMIWPLSIAPYTVIVDILNMNDPDQKRVGEEIYRALLEKGEEVVLDDREV-SPGF 512

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           + K AD    P+ I  G      G++++K     + +   I+N
Sbjct: 513 KFKDADLIGFPIRINVGRS-LKDGVIELKKRYSKELVKVSIQN 554


>gi|222528807|ref|YP_002572689.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455654|gb|ACM59916.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 647

 Score = 70.3 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 79/246 (32%), Gaps = 7/246 (2%)

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            + I  ++  L I+ +                             ++      +++ I+ 
Sbjct: 405 LDLIQYIMKILGIENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNI---LDKLGINY 461

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---G 350
              +G   + G   +         E     +        R+D       GQ         
Sbjct: 462 KEAKGEAAFYGPKLDIQFKNVYGKEDTIITIQIDFALAERFDMTYVDRDGQKKRPIIIHR 521

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG     +A+   + +      + PV I  +    +     +   ++L+  G R E  
Sbjct: 522 SSIGCYERTLAMLIEKYNGAFPLWLAPVQIRVIPVSDNFNEYAKNVARILKENGFRVEED 581

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              S+  G +++ A  +  P  +I G  E+    + ++D  KG   S  I++  +  + +
Sbjct: 582 Y-RSETVGYKIRDAQLQKIPYMVIVGEKEQKENTVAVRDRKKGDLGSFTIEDFIAMVKEK 640

Query: 471 VAQITI 476
           V +  I
Sbjct: 641 VDKKVI 646



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 68/220 (30%), Gaps = 8/220 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   + +  E  G+   +TP +  SD   K     D    G+F +
Sbjct: 265 GLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPYMAKSDLY-KISGHWDHYRDGMFVI 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           ++D+ + ++LR  +T P        F       R+YR  P+  +E     R     +   
Sbjct: 324 EEDENEVLALRP-MTCPF------QFLIYNSKQRSYRDLPIRYSETSTLFRNESSGEMHG 376

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    +DA +        E      +     +    I + I  +      +   + 
Sbjct: 377 LIRVRQFTLSDAHIICRPDQVEEEFKGVLDLIQYIMKILGIENDIWYRFSRWDPNNKEKY 436

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +    A +K +      +  L    +         G  L 
Sbjct: 437 IDNPEAWEKTENDMKNILDKLGINYKEAKGEAAFYGPKLD 476


>gi|302325997|gb|ADL25198.1| threonine--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 645

 Score = 69.9 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 62/427 (14%), Positives = 118/427 (27%), Gaps = 39/427 (9%)

Query: 51  EYSDSLGKFLPDEDR-----PNKGV--FSLQDDDGQWISLRYDLTAPLARYVAENFDTIV 103
           E  ++  KFL + ++       K +  + ++D     +      T    + V    D I 
Sbjct: 236 EGLETYLKFLEEAEKRDHRKIGKEMDLYHIEDHSPGMVFWHPKGT----KMVNALKDYIR 291

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
                     V   E      + +    D  N       A         D   AV     
Sbjct: 292 GKIDRRGYLEVITPEIVNKTLWIKSGHADKYNENMFKTLAG--------DVEMAVKPMNC 343

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
             HI I N  +              +L E     R        GL  V+        D++
Sbjct: 344 PCHIQIFNTGLRS------WRDLPMRLAEFGKCHRYEPAGTMHGLMRVRG----FVQDDA 393

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
             F     + SE  D       I  +    ++            G +E+   +E      
Sbjct: 394 HIFCTEDQIASEVADFCALVKEIYHDFGFDDIVVKFSTRPEKRVGSDEIWDKAEAALAEA 453

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLV 338
                +        G  Y     +        +    +              G  Y G  
Sbjct: 454 TKLAGLDYILNPGEGAFYGPKLEF---TLKDSLGRDWQCGTIQVDFNLPQRLGAEYVGKD 510

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           ++     +        I R +  L   E   +    + PV    +      +   +   +
Sbjct: 511 NQKHIPVMLHRAAVGSIERFLGILIE-EFMGDFPLWLAPVQARVLPISEKFVDYAKQVEK 569

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L  AG+R E+   S++  G +++  + +  P  +I G  E + G++ ++    G + S 
Sbjct: 570 ELVNAGVRVEVD-ESNEKLGYKIRQCELQKVPYLLIVGEKEVADGVVSVRKRKDGDKGSM 628

Query: 459 EIKNNES 465
            +     
Sbjct: 629 TVAQFLE 635



 Score = 40.6 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K  ++ N + D IR   +  G+  + TP +    +L       D+ N+ +F 
Sbjct: 271 GMVFWHPKGTKMVNALKDYIRGKIDRRGYLEVITPEIVNK-TLWIKSGHADKYNENMFK 328


>gi|86136290|ref|ZP_01054869.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           MED193]
 gi|85827164|gb|EAQ47360.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           MED193]
          Length = 347

 Score = 69.9 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 108/358 (30%), Gaps = 46/358 (12%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVA 96
           +E  G   +E PLL+ + +L     ++ R    V S      Q   LR D T P+   V 
Sbjct: 3   FEAAGAQVVEPPLLQPAGTLLDLYGEDIRARAYVTSDAVRGEQM--LRPDFTLPV---VQ 57

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +      P R    G VFR ++H P R  +++Q   +        A           L 
Sbjct: 58  MHMREGAEPARYTYAGEVFRRQEHDPDRSNEYLQVGYEIFERDDPAAADAEVF----ALI 113

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD-------KFGLQ 209
           A+ ++         +  IL   ++ +      K      + R             +  L 
Sbjct: 114 ALQLRGLPLRAATGDIGILMAAVQGLNTTQMRKAALMRHIWRPRRFRSLLDVYAGRSPLP 173

Query: 210 GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK------------------- 250
             +L L       +G  T     +  +++  +  L  D                      
Sbjct: 174 ENRLKLLSSEGPLTGSATVLGKRSEAEVEARIELLRQDAATPPIAENELLALEALMAVRE 233

Query: 251 ----SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
               ++ ++ ++     A     + L      ++  G + + +   ++  R         
Sbjct: 234 TVPFAIEQMRDIAVDLPAINPALDRLDGRIAALKARGIDIDSLDFEASYGR-------TS 286

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            E   GF      +       +  GGRYD L  +            +    L++ L+ 
Sbjct: 287 MEYYDGFVFGFYAEARPDLPPIASGGRYDALTRQLGQGAEIPAVGGVLRPDLMLMLEE 344


>gi|312876378|ref|ZP_07736363.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796872|gb|EFR13216.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 647

 Score = 69.9 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 79/246 (32%), Gaps = 7/246 (2%)

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            + I  ++  L I+ +                             ++      +++ I+ 
Sbjct: 405 LDLIQYIMKTLGIENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNI---LDKLGINY 461

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---G 350
              +G   + G   +         E     V        R+D       GQ         
Sbjct: 462 KEAKGEAAFYGPKLDIQFKNVYGKEDTIITVQIDFALAERFDMTYVDRDGQKKRPIIIHR 521

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG     +A+   + +      + PV I  +    +     +   ++L+  G R E  
Sbjct: 522 SSIGCYERTLAMLIEKYNGAFPLWLSPVQIRVIPVSDNFNEYAKNVARILKENGFRVEED 581

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              S+  G +++ A  +  P  +I G  E+    + ++D  KG   S  I++  +  + +
Sbjct: 582 Y-RSETVGYKIRDAQLQKIPYMVIVGEKEQKENTVAVRDRKKGDLGSFTIEDFIAMVKEK 640

Query: 471 VAQITI 476
           V +  I
Sbjct: 641 VDKKVI 646



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 68/220 (30%), Gaps = 8/220 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   + +  E  G+   +TP +  SD   K     D    G+F +
Sbjct: 265 GLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPYMAKSDLY-KISGHWDHYRDGMFVI 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           ++D+ + ++LR  +T P        F       R+YR  P+  +E     R     +   
Sbjct: 324 EEDENEVLALRP-MTCPF------QFLIYNSKQRSYRDLPIRYSETSTLFRNESSGEMHG 376

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    +DA +        E      +     +    I + I  +      +   + 
Sbjct: 377 LIRVRQFTLSDAHIICRPDQVEEEFKGVLDLIQYIMKTLGIENDIWYRFSRWDPNNKEKY 436

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +    A +K +      +  L    +         G  L 
Sbjct: 437 IDNPEAWEKTENDMKNILDKLGINYKEAKGEAAFYGPKLD 476


>gi|323700409|ref|ZP_08112321.1| prolyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323460341|gb|EGB16206.1| prolyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 580

 Score = 69.9 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 64/211 (30%), Gaps = 9/211 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R  N++   +R      G   +  P ++ +D L +     D  
Sbjct: 31  MIRKLTSGIYNYLPLGLRAINKVAQIVREEMNRAGALEVLLPTVQPAD-LWRETGRWDYY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            K +   +D + +   L     ++   L R   +++  +      Y++   FR+E     
Sbjct: 90  GKELLRFKDRNDRDYCLGPTHEEVITDLVRGEIKSYKQLP--VNLYQVQTKFRDEIRPRF 147

Query: 124 RFRQ---FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   FI  D  +       A+     M      A       +     +   + G   
Sbjct: 148 GLMRGREFIMKDGYSFDKDEAGAEQSYWDMFNAYKAAFTRIGLRFKPVQADSGAIGGSFS 207

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
              +   +   + +    + D         V
Sbjct: 208 HEFMVLAETGEDTIASCLSCDFAANLEKAKV 238



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 1/107 (0%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              +I      LI+    D D   K +     L   G+         +  G +   AD  
Sbjct: 466 FPPSIAPFEVCLISLGGKDQDVADKAEELYAELMKLGVDVAFD-DRGERPGVKFAEADLI 524

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             P+ ++ G      G+++ KD   G+++   +    +       QI
Sbjct: 525 GYPMQLVLGGKGLKNGIIEAKDRKTGEKVELPLDTFAASFADWRNQI 571


>gi|303244761|ref|ZP_07331091.1| histidyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302484895|gb|EFL47829.1| histidyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 54

 Score = 69.9 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 9  AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
           + P+G  D    E++ R  I + +RN++++Y F  I TP  E  + L K 
Sbjct: 2  FKKPKGTRDFTPLEMKKRRIIENKLRNVFDSYNFKEINTPTFESFELLSKK 52


>gi|121635048|ref|YP_975293.1| prolyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|152112936|sp|A1KUG4|SYP_NEIMF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120866754|emb|CAM10507.1| prolyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325138239|gb|EGC60808.1| prolyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 570

 Score = 69.9 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 62/522 (11%), Positives = 141/522 (27%), Gaps = 80/522 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +    +     +   + 
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLGLAFRPVAADTGSIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       + TK      + 
Sbjct: 204 GTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLPLKGERTA-AQAELTKVHTPNVKT 262

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           I+ +V FL+I +E+++                     HE  ++    +AG K    +   
Sbjct: 263 IESLVEFLNIPVEQTLKSIVVESENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASS 322

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +V + G N   +       +   ++ T    + ++G            FG       +
Sbjct: 323 AAIVEQFGANGGSLGPVGFKGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEF 382

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 383 VDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 442

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M P  +  +  +                 L  AG
Sbjct: 443 GIGITRVVAAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAG 502

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
               +     +  G  L  ++    P  I+ G      G ++
Sbjct: 503 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNVE 543


>gi|312794079|ref|YP_004027002.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181219|gb|ADQ41389.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 647

 Score = 69.9 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 79/246 (32%), Gaps = 7/246 (2%)

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            + I  ++  L I+ +                             ++      +++ I+ 
Sbjct: 405 LDLIQYIMKTLGIENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMKNI---LDKLGINY 461

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---G 350
              +G   + G   +         E     V        R+D       GQ         
Sbjct: 462 KEAKGEAAFYGPKLDIQFKNVYGKEDTIITVQIDFALAERFDMTYVDRDGQKKRPIIIHR 521

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG     +A+   + +      + PV I  +    +     +   ++L+  G R E  
Sbjct: 522 SSIGCYERTLAMLIEKYNGAFPLWLSPVQIRVIPVSDNFNEYAKNVARILKENGFRVEED 581

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              S+  G +++ A  +  P  +I G  E+    + ++D  KG   S  I++  +  + +
Sbjct: 582 Y-RSETVGYKIRDAQLQKIPYMVIVGEKEQKENTVAVRDRKKGDLGSFTIEDFIAMVKEK 640

Query: 471 VAQITI 476
           V +  I
Sbjct: 641 VDKKVI 646



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 68/220 (30%), Gaps = 8/220 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   + +  E  G+   +TP +  SD   K     D    G+F +
Sbjct: 265 GLPLLMPKGAKILQILQRFVEDEEEKRGYLLTKTPYMAKSDLY-KISGHWDHYRDGMFVI 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           ++D+ + ++LR  +T P        F       R+YR  P+  +E     R     +   
Sbjct: 324 EEDENEVLALRP-MTCPF------QFLIYNSKQRSYRDLPIRYSETSTLFRNESSGEMHG 376

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    +DA +        E      +     +    I + I  +      +   + 
Sbjct: 377 LIRVRQFTLSDAHIICRPDQVEEEFKGVLDLIQYIMKTLGIENDIWYRFSRWDPNNKEKY 436

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +    A +K +      +  L    +         G  L 
Sbjct: 437 IDNPEAWEKTENDMKNILDKLGINYKEAKGEAAFYGPKLD 476


>gi|323705637|ref|ZP_08117211.1| prolyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535114|gb|EGB24891.1| prolyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 570

 Score = 69.9 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R +L  G         R+  +I + +R   +  G   +    +  ++ L K  
Sbjct: 26  MLKAAMMR-KLASGVYIYLPLGKRVLKKIEEIVREEMDRAGAQEVLMSAIIPAELL-KES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +F L+D + +   L  
Sbjct: 84  GRWDVFGPEMFKLKDRNDREFCLGP 108



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 38/126 (30%), Gaps = 20/126 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     +++     +       +     L  AGI   +     +  G +   AD 
Sbjct: 464 IWPMSIAPYHVIIVPVNVSNDVQRDLAEKLYDELSKAGIEVLIDDRDLRA-GVKFNDADL 522

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ I  G       ++++K                         I +   E++  VK
Sbjct: 523 LGIPIRITVGKK-AEDNIVELK------------------LRREEKPIELKYDEVLGKVK 563

Query: 487 KILQEN 492
           +++ EN
Sbjct: 564 ELISEN 569


>gi|260892490|ref|YP_003238587.1| prolyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864631|gb|ACX51737.1| prolyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 574

 Score = 69.9 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 8/134 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R      G   I  P+L+ ++   +     +     +F L
Sbjct: 38  GIYTLLPLGKRVLAKIESIVREEMNRAGGQEILMPILQPAELWHRS-GRWEVYGPELFRL 96

Query: 74  QDDDGQWISLRY----DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +D  G+   L       +TA +A   AE       P   Y+IG  +R+E+       +  
Sbjct: 97  KDRHGRDFCLGPTHEEMITALVA---AEVRSYKQLPLLLYQIGNKYRDERRPRFGLLRGR 153

Query: 130 QCDVDNVGSSAETA 143
           +  + ++ S     
Sbjct: 154 EFIMKDLYSFDRDW 167



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 21/129 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          VL+  ++++        +    +LR  GI   +     +  G + 
Sbjct: 457 DEEGIIWPLAVAPFQVLVLPVNYEEVPQREVAEEIYNLLREKGIEVLLDDREER-PGVKF 515

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K AD    PL I  G    + G +++K    G+          +W         +   E+
Sbjct: 516 KDADLVGYPLRITVG-RHAAEGKVELKLRRTGE----------TWL--------VDKDEV 556

Query: 482 VSTVKKILQ 490
           +  V   L+
Sbjct: 557 LEKVAAFLE 565


>gi|695786|emb|CAA58846.1| orf5 [Zymomonas mobilis]
          Length = 443

 Score = 69.9 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 48/471 (10%), Positives = 111/471 (23%), Gaps = 61/471 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  R    IR      G   +  P L+ +D   +        
Sbjct: 31  MIRQTASGIYAWLPLGLRVLGRNEKIIREEQARAGAAELLMPTLQTADLWPESG------ 84

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                            RYD                           + R +        
Sbjct: 85  -----------------RYD----------------------AYGPEMLRFKDRHNCELL 105

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                +            +   +           +          R     + +      
Sbjct: 106 YGPTNEEMITALIRHNLQSYAILAGIFYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDI 165

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           D+           +  L+ F   G++ +  +  T   G       +          F   
Sbjct: 166 DETAGRHNYNRMFVGYLNSFSRLGLRAIPMQADTGPIGGDLSHEFIVLAPNGERHVFYHS 225

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN--SNRIKISSTIVRGLEYYTG 304
           + E+    +        A +   N+ +       +        +        RG+E    
Sbjct: 226 NWEQPTRHIEADFDDPKALQSIVNDHISDYAATDEKRDPLREAQAGDKLRQSRGIEVGHI 285

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             +      P+      P            DG     +  +       +  + +  +   
Sbjct: 286 FFFGTKYSKPMGFTLPGP------------DGKPIPIQMGSYGIGISRLLGAIIEASHDD 333

Query: 365 LESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                        V +  +   D +  +      Q L  AGI       + +  G +   
Sbjct: 334 NGIIWPEAVAPYHVGLINLRIDDENCRAIADSLYQRLEAAGIDTLYDDRNERG-GAKFAT 392

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            D    P  ++ G     +G++++K+ A G++ +  +++  +   A   Q 
Sbjct: 393 MDLIGLPWQVVIGPKGAEKGVIELKNRASGEKQTISVEDAFNLLTAGHQQR 443


>gi|75764436|ref|ZP_00743936.1| Histidyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488077|gb|EAO51793.1| Histidyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 84

 Score = 69.9 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 3/78 (3%)

Query: 396 YTQMLRTAGIRAEMFLGSS---KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               LR+  ++ +         +    Q K ADR       + G  E  +G++ +KD+A 
Sbjct: 5   MLHKLRSIFVKLDCQFEKDYLDRKMKAQFKSADRLKAKFVAVLGEDELDKGIINLKDMAT 64

Query: 453 GKELSREIKNNESWREAR 470
           G++    +    S+   +
Sbjct: 65  GEQEEVALDVFASYVAEK 82


>gi|218768358|ref|YP_002342870.1| prolyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|81857470|sp|Q9JU09|SYP_NEIMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|121052366|emb|CAM08698.1| prolyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 570

 Score = 69.9 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 60/522 (11%), Positives = 140/522 (26%), Gaps = 80/522 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILD 176
                    +           +   +       M D    +  +   ++     +   + 
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLGLEFRPVAADTGSIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G          +   + +      D      L     L GE       +  K      + 
Sbjct: 204 GTGSHEFQVLAESGEDVIAYSDTSDYAANVELAPTLPLKGERTA-AQAELVKVHTPNVKT 262

Query: 237 IDIMVSFLSIDLEKSM---------------------HELYELVKGTIAGEKGFNELVVI 275
           I+ +V FL+I +E+++                     HE  ++    +AG K    +   
Sbjct: 263 IESLVEFLNIPVEQTLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASP 322

Query: 276 SELVRKSGYNSNRIKISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +V + G N   +       +   ++ T    + ++G            FG       +
Sbjct: 323 AAIVEQFGANGGSLGPVGFAGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEF 382

Query: 335 DGLVSRFKGQNVP-------------------------------------------ATGF 351
             L +  +G   P                                              +
Sbjct: 383 VDLRNVVEGDESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCY 442

Query: 352 SIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAG 404
            IGI+R++ A       E      K M    +  +  +                 L  AG
Sbjct: 443 GIGITRVVAAAIEQNNDEKGIIWTKAMASFEVVIVPMNYKKSDTVREAADKIYAELLAAG 502

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
               +     +  G  L  ++    P  I+ G      G ++
Sbjct: 503 ADVLLDDRDERA-GVLLNDSELLGIPHRIVIGDRALKEGNVE 543


>gi|315503148|ref|YP_004082035.1| threonyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315409767|gb|ADU07884.1| threonyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 671

 Score = 69.9 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 48/118 (40%), Gaps = 19/118 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    +       +   LR  G+RAE+ LG  +    +++ A ++  P  +
Sbjct: 562 WLAPVQVVGIPIRDEHGDYLVDFAATLRRHGVRAEVDLGDDR-MQKKIRNAQQQKIPFMV 620

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           I G  + + G +  +    G + +                  +P+ E V+ V+++++ 
Sbjct: 621 IAGDDDVAAGTVSFRY-RDGSQRNG-----------------VPVDEAVAHVREVVES 660


>gi|15643280|ref|NP_228324.1| prolyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|81859132|sp|Q9WYY4|SYP_THEMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|4981026|gb|AAD35599.1|AE001727_11 prolyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 577

 Score = 69.9 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/523 (9%), Positives = 127/523 (24%), Gaps = 80/523 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I + +R      G   I  P+L+ ++ L K     D     +  L
Sbjct: 38  GIYTYLPLGRRVLLKIENIVREEMNRIGAQEILMPILQPAE-LWKQSGRWDDYGPEMMKL 96

Query: 74  QDDDGQWISLRY---DLTAPLA----RYVAE-----------NFDTIVFPCRTYRIGPVF 115
           +D   +  +L     ++   L     R   +             D I       R     
Sbjct: 97  KDRHERDFTLGPTHEEIVTDLVKNELRSYKQLPLTLYQIANKYRDEIRPRFGLLRAREFI 156

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
             + +      + +    +    +       + +         G    +          +
Sbjct: 157 MKDAYSFHASWESLDETYEQFKKAYSRIMERLGVRYMIIEAETGAIGGNASHEFVVPAKI 216

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
                        + ++     +     ++   + +K +   G      + ++   +   
Sbjct: 217 GETNVLFCEKCGYQASDEKAEYKGEYTQEQEEEKPLKKVPTPGVK-TIEEVSEFLGVPPS 275

Query: 236 QIDIMVSFLSIDL------EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           +I   + +   +          +      +K  +  +     +    E+++  G     I
Sbjct: 276 KIVKSLLYKGREGYVMVLIRGDLELNEAKLKAHLKDQSL--RMATPEEILKDFGVPVGFI 333

Query: 290 KISSTIVRGLEYYTGCVYE-AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
                 V+ +  ++    +  ++G    +                +  L +  +G   P 
Sbjct: 334 GPIGVDVKKVADHSVRGLKNFVVGGMEEDTHYVNANHPRDFKVDEWYDLRTVVEGDPCPV 393

Query: 349 T------------------GFSIGISRLIVALKSLESSTN-------NIKEMGPVLITTM 383
                              G     +     +                        +   
Sbjct: 394 CGEPLKATKGIELGHIFKLGTKYSEAMKAYFMDENGEMKPFIMGCYGWGVSRTMAAVVEH 453

Query: 384 DHDSDSLSKYQMYT------------------------QMLRTAGIRAEMFLGSSKNFGN 419
            HD + +                               Q+L   G    +      + G 
Sbjct: 454 FHDENGMIWPLSIAPYTVVVDILNMNDAEQKQVGEKIYQVLSEKGEEVVLDDREV-SPGF 512

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           + K AD    P+ I  G      G++++K     + +   IKN
Sbjct: 513 KFKDADLIGFPIRINVGRS-LKEGVVELKKRYSKELVKVNIKN 554


>gi|99080345|ref|YP_612499.1| ATP phosphoribosyltransferase regulatory subunit [Ruegeria sp.
           TM1040]
 gi|99036625|gb|ABF63237.1| ATP phosphoribosyltransferase regulatory subunit [Ruegeria sp.
           TM1040]
          Length = 363

 Score = 69.9 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 120/374 (32%), Gaps = 49/374 (13%)

Query: 23  IRIRNRILDS---IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
           +  R++I      +R  +E  G   ++ PLL+ +D L     ++ R    V S      Q
Sbjct: 1   MPNRSQIEARAALLRQRFEVAGGVVVDPPLLQPADVLLDLYGEDIRARAYVTSDALRGEQ 60

Query: 80  WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
              LR D T P    V  +      P R    G VFR ++H P R  +F+Q   +    +
Sbjct: 61  M--LRPDFTLP---MVQMHMKGGAEPARYTYAGQVFRRQEHDPERANEFVQVGYEVFDRT 115

Query: 140 AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
                          L  + ++  +  +   +  IL   +E +      K   R  + R 
Sbjct: 116 DPADADAEVF----ALFQLQLRGLELRVATGDIGILMAAVEGLNTTEVRKAALRRHIWRP 171

Query: 200 IDKLDKFGL--------QGVKLLLG--------------------EGRTDNSGDFTKGAN 231
                            +  K LL                     + R +          
Sbjct: 172 RRFRALLDRFAGRTPMSESRKKLLSTTGPLTGSAPEIGKRRTAEIDARVETLRADAGAPP 231

Query: 232 LTSEQIDIMVSFLSID--LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           ++  +++ + + L++   +  ++ ++ ++     A       L   S  ++  G   +++
Sbjct: 232 ISEHEMEALEALLAVRETVPYALEQMRDIAVDLPAILPALERLEARSAAMKARGIAIDQL 291

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
              +   R          E   GF      ++      +  GGRYD L       +    
Sbjct: 292 DFEAAYGR-------TSMEYYDGFVFGFYAERRPDLPPIATGGRYDALTRYLGQGDEIPA 344

Query: 350 GFSIGISRLIVALK 363
              +    LI+AL+
Sbjct: 345 VGGVIRPDLILALE 358


>gi|227496236|ref|ZP_03926533.1| threonine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226834224|gb|EEH66607.1| threonine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 679

 Score = 69.9 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                LR  G+R E  L   + FG +++ A +   P  +
Sbjct: 569 WLAPVQVRLIPVAEAFDDYVTQVAARLRERGVRVETDLSDDR-FGKKIRNASKEKVPFTL 627

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +   G +  +    G++ +                  +P+ E +  +  ++    
Sbjct: 628 IAGGEDAEAGAVSFR-FRDGEQTNG-----------------VPVDEAIEHIADVIARKV 669

Query: 494 EE 495
            +
Sbjct: 670 ND 671


>gi|300173545|ref|YP_003772711.1| threonyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887924|emb|CBL91892.1| Threonyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 655

 Score = 69.9 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/446 (11%), Positives = 109/446 (24%), Gaps = 83/446 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G          IR ++   I +     G+  + TP+L   +   K     D   + +F 
Sbjct: 265 SGLPVWLPNGATIRRQVERYITDKELANGYQHVYTPVLSNLNLY-KTSGHWDHYREDMFP 323

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+++ LR                        ++  P    E          +  
Sbjct: 324 PMDMGDGEFLELRP--------------MNCPSHIMVFKHKPRSYRELPIRIAELGMMH- 368

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A   +  +   TL           I    + IL  ++       D  + 
Sbjct: 369 -----RYEKSGALTGLSRVREMTLNDGHTFVEPEKIEEEFKSILTMMMAVYR---DFNIT 420

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D+       A L S   D+ + +   + E +
Sbjct: 421 DYRFRLSYRDPKNT----------EKYFDDDEMWEKSQAQLKSAMDDLKLDYYEAEGEAA 470

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   I                +   + 
Sbjct: 471 FYGPKLDVQTKTALGNEETMSTIQLDFLLPERFDLTYIGADGQDNHRPVMLHRGIVGTME 530

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 531 RFTAYLIEMYKGAFPTWL------------------------------------------ 548

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  ++  +          + L+  G+RA +    +K  G  ++ A     P 
Sbjct: 549 --SPLQVQIIPVNLGAHG-EYADGVQKKLQAVGLRANVETKEAK-MGYLIREAQTNKIPY 604

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELS 457
            ++ G  E     + ++    G+E +
Sbjct: 605 TLVLGDSEVDAQTVTVR--KYGEEKT 628


>gi|320102025|ref|YP_004177616.1| tRNA synthetase class II (G H P and S) [Isosphaera pallida ATCC
           43644]
 gi|319749307|gb|ADV61067.1| tRNA synthetase class II (G H P and S) [Isosphaera pallida ATCC
           43644]
          Length = 589

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 7/116 (6%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            E  RG              + +++   +   G+D + TP+LE  +   +        +K
Sbjct: 34  IEPIRGTRGWSPHSFESLEVVEEALMASFLQAGYDRLRTPVLEPVELHARKSG-AAIVSK 92

Query: 69  GVFSLQDDDGQWI--SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
               L + +G  +   LR + TA + R  +    T   P R    GPVFRNE  G 
Sbjct: 93  ----LFEVNGAEVPACLRPEFTAGIVRTFSAMEQTPTLPWRVCVSGPVFRNEAVGE 144


>gi|119899055|ref|YP_934268.1| prolyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|152074747|sp|A1K976|SYP_AZOSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119671468|emb|CAL95381.1| unnamed protein product [Azoarcus sp. BH72]
          Length = 581

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     ++   ++ + IR      G   +  PL++ S+ L +     D+ 
Sbjct: 31  MIRKVAAGIYNYLPMGLKSIRKVENIIREEMNRAGALELTMPLVQPSE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +   +D   +  +L+    ++   +AR   +++  +       +             
Sbjct: 90  GPEMLRFKDRHERDFALQPTSEEVVTDIARQELKSYRQLPKNFYQIQTKFRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D    +A  +   M    +   + +G
Sbjct: 150 MRGREFTMKDAYSFDRSAEAAGESYDAMYAAYSRIFDRLG 189


>gi|268590504|ref|ZP_06124725.1| hypothetical protein PROVRETT_06701 [Providencia rettgeri DSM 1131]
 gi|291314090|gb|EFE54543.1| proline--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 572

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 47/161 (29%), Gaps = 8/161 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  D     +R+  ++   +R   EN G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYDWLPTGVRVLRKVETIVREEMENAGAIEVSLPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +    D   +   L     ++   L R    ++  +          +R     R   
Sbjct: 90  GPELLRFVDRGERPFVLGPTHEEVITDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
                F             S +     M    +     +G 
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDAMYEAYSKIFTRIGF 190



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 29/110 (26%), Gaps = 3/110 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     L+  GI         +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSYRVKEVAEKLYADLKANGIDVIFDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +    P  I+ G        ++ K      +    ++N  S+ + +
Sbjct: 520 FADMELIGVPYTIVIGDRNLDNNQIEYKSRRSDDKELVGLENVISFLKGK 569


>gi|71019463|ref|XP_759962.1| hypothetical protein UM03815.1 [Ustilago maydis 521]
 gi|46099508|gb|EAK84741.1| hypothetical protein UM03815.1 [Ustilago maydis 521]
          Length = 536

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/453 (11%), Positives = 109/453 (24%), Gaps = 65/453 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++   +R++Y+ YG+D +++P L Y  SL K     D     +F  
Sbjct: 84  GTPFILPHGMRLARKVERVVRDLYDVYGYDEVQSPQL-YKTSLWKRSGHWDNYRDDMF-- 140

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                 AE +          R                     + 
Sbjct: 141 ---------------------AAEGYKERFSSSIDDRRTSCCSIHPPTSATEATAANAED 179

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           ++ G           +  +       +          +R    G L  +        ++ 
Sbjct: 180 ESFGLKPMNCPGHCLIFGSSERSYRDLPIRYAEFSPLHRNEASGALTGLTRVRRFHQDDA 239

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            +  R  D++       + +L     T    DF    +   E               S+ 
Sbjct: 240 HVFCR-PDQVAVEINSMLSMLTSAYDTFGFSDFELVLSTRPES-----------FIGSVE 287

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E      G             ++            I +     R  +  T          
Sbjct: 288 EWDRAEAGLRQALDASGRKWEMNAGDGAFYGPKIDIHLVDGQGRRHQTAT---------- 337

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  + Q P  F              R     +           + + ++          
Sbjct: 338 -IQLDFQLPRRFDLSYADPAAKQTNERSVPVMIHRAILGSVERFMAILIEQTAGWWPFWL 396

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI--------RAEMFLGS----------SK 415
                +I     ++ +L++Y        + GI         +E  L            ++
Sbjct: 397 SPRQAIIIPATTNNPALTEYVEKLHKFLSLGIHPDAPPSSSSERHLQRFFVDVESNPQNE 456

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             G  ++ A        ++ G  E     + ++
Sbjct: 457 KLGKLVRKAQLARYNYILVVGEKEMHTNTINVR 489


>gi|310789927|gb|EFQ25460.1| threonyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 526

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 58/490 (11%), Positives = 129/490 (26%), Gaps = 56/490 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ NR++D +R  Y +YGF+ + TP + Y  SL +           ++++
Sbjct: 72  GSPIFLPNGTRVFNRLVDFLRRQYVHYGFEEVITPNI-YKKSLWERSGHLQNYADDMYTV 130

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                             AR                  G    +E  G        + D 
Sbjct: 131 TSR---------------ARA-----PEEKAAGCCGADGRSPPHEGSGETARTAEGEDDD 170

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  D+     +R  + G L  +        ++ 
Sbjct: 171 YGLKPMNCPGHCLIFASKTRSYRDLPIRFADFSP--LHRNEISGALSGLTRVRRFHQDDG 228

Query: 194 LIVLRAIDKLDKFGLQGVKLLLG--EGRTDNSGDFTKGANLTSEQIDIMV--SFLSIDLE 249
            I  R          + V   L   +      G       L++   D  +         E
Sbjct: 229 HIFCR-----PIQIREEVFKTLDFMKTVYGALGLDYFDFALSTRPADHYIGTDAEWERAE 283

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
             + +  E        ++G          V     +  +   + TI    +       E 
Sbjct: 284 GQLRDALEQAGLKYTVKEGDGAFYGPKIDVMLHDSH-GKSHQAGTIQLDFQLPQRFNLEY 342

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
               P +  +  P+          Y  +      + +           + + ++  +   
Sbjct: 343 KAPAPKLEAQGLPLEKADPAELETYGSVTPVMVHRAI----LGSVERLMALLIEEYKGKW 398

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQML---------------RTAGIRAEMFLGSS 414
                    +I T++     +         L               R  G   ++ + S 
Sbjct: 399 PFWLNPRQCVILTLNDTEPVVRWASEIKDTLTGHDRVRDPNKPVQPRPTGFAVDIDV-SP 457

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           ++   +L  A  +   L  + G        + +     G+  S      +   +     +
Sbjct: 458 RSLQKKLAEAIEKGYGLIAVVGKKNVENQTVTV---QTGERPSENGDKKKPREDLSAMGL 514

Query: 475 TIPISELVST 484
            + + E+V T
Sbjct: 515 RLKMQEMVET 524


>gi|301113676|ref|XP_002998608.1| eukaryotic translation initiation factor 2-alpha kinase, putative
            [Phytophthora infestans T30-4]
 gi|262111909|gb|EEY69961.1| eukaryotic translation initiation factor 2-alpha kinase, putative
            [Phytophthora infestans T30-4]
          Length = 1394

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 83/511 (16%), Positives = 160/511 (31%), Gaps = 79/511 (15%)

Query: 21   KEIRIRNRILDSIRNIYENYGFDPIETPLLEY--SDSLGKFLPDEDRPNKGVFSLQDDDG 78
             ++R +  + + ++ ++E +G   + TPLL    S+     +     PN  +  + D +G
Sbjct: 778  AQLRTKTYVRNVLQKVFERHGAVEMSTPLLMPRLSEQTFNGITLNAPPNASM--MLDGNG 835

Query: 79   QWISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
              +SL +DLT  LAR+VA +    +   +        V              I  D    
Sbjct: 836  VSVSLPFDLTERLARFVARHNVLRLKCFQFDRVYRKSVGGGHPREFNESDFDIIWDDGGS 895

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN----- 191
                E    E+   +   L +       Y++  N+ ++  GIL+   +    +       
Sbjct: 896  FRFLELEGLEVVSGVIRALPS---HLGSYYLRFNDARVTRGILDLCRVPSSARREVLRLL 952

Query: 192  --------ERLIVLRAIDKLDKFGLQGVKLLLGEGRT-DNSGDFTKGANLTSEQIDIMVS 242
                               L     + V   L       +  +  K   L  E     + 
Sbjct: 953  SNEVSFYVHARPPSTQAPSLKPSRWKFVAKRLKHYGAPPSVIEALKPFFLLPEDCLTSLD 1012

Query: 243  FLSIDLEKSMHELYEL---------------------------VKGTIAGEKGFNELVVI 275
             + ++++K   +   L                           VK  I G      L+  
Sbjct: 1013 MIELEVQKLFAKNRALTTRDSTTDGDAADRKQIQKRDAQLRRVVKDVIEGITSLRLLLQG 1072

Query: 276  SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPV-----------V 324
             + ++ SG    R+ +     R   Y +G +++AIL     N                  
Sbjct: 1073 MQFLQLSGPVCTRLDLG-LSPRPERYSSGFIFQAILLEESTNGGNNGGKIASLLVAATDN 1131

Query: 325  FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA----------------LKSLESS 368
               +  GGRYD LVSRF+     A   ++    +  A                L+    +
Sbjct: 1132 QIIIAEGGRYDALVSRFQLTTAYAKSSAVAAMGVRFAIDKIVSLLAESMGSTLLELKSPA 1191

Query: 369  TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +  +     VLI +    SD++        +L   GI A+       +  +   Y  ++N
Sbjct: 1192 SEVLTGGRKVLICSAGKASDTMLFRMQIAMLLWGQGIGADYLHPEPLHLEDLEDYCAQQN 1251

Query: 429  CPLAIIQGTGER-SRGMLQIKDLAKGKELSR 458
                +I        +  ++I+ +    E   
Sbjct: 1252 VHWMVIVQKHMIRDKQQVKIRAVKSHSEADV 1282


>gi|302036852|ref|YP_003797174.1| prolyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|190343267|gb|ACE75655.1| prolyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604916|emb|CBK41249.1| Prolyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 543

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 37/153 (24%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  +I   +R      G   +  P+   ++ L +     D   K +   
Sbjct: 13  GIYTYLPLGLRVLRKIERIVREEMNRAGAQELLMPVASPAE-LWRETGRWDFYGKELLRF 71

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +D   +   L         DL     R   +           +R     R        F 
Sbjct: 72  KDRHERDFCLGPTHEEVITDLFRREVRSYRQMPLNFYQIQTKFRDEIRPRFGLMRGREFI 131

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D   + A     +M           G
Sbjct: 132 MKDAYSFDRDEAGARLNYQKMYDAYNRIFTRCG 164



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 29/92 (31%), Gaps = 1/92 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +             V +  +          +   + ++ AGI         +  G +  
Sbjct: 432 DAKGIKWPVPIAPFHVTLLPLSQSQPVTQLAETLYRAMQEAGIEVLWDDRDERA-GVKFN 490

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            AD    P  ++ G    ++G +++K    G+
Sbjct: 491 DADLIGAPYHLVIGEKGLAQGQVELKLRHTGE 522


>gi|167044354|gb|ABZ09032.1| putative anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG6C9]
          Length = 616

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 68/236 (28%), Gaps = 14/236 (5%)

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
               G +   +    ++ + K   +     +   + +   +Y    +E      +     
Sbjct: 374 DYETGIRFTEDFYNKNKELIKQMVSKVGKPVLVEMWKEKFFYFVLKWEFNFVDDLGRASA 433

Query: 321 KPVVFGSVGGGGRY-----DGLVSRFKGQNVPATGFSIGISRLIVALKSL------ESST 369
                  V    RY     D    +     +  +        +   L+            
Sbjct: 434 LSTDQIDVENAKRYGITFTDEKNEQQYPIILHNSPSGAVERVIYALLEKFAKQIKDGKRP 493

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + P+ +  +    D L         L    IR ++   +    G +++ A++   
Sbjct: 494 QFPLWLAPIQVRLIPLKDDFLEFSSDLANKLTEQNIRVDIDDRND-TIGKRIRDAEKEWI 552

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
              ++ G  E +   L ++D   G      I++     +   +    P S+L ST+
Sbjct: 553 SYVLVIGEREVNSSSLSVRDRTTGDVRQLSIEDFVKEIKDATSGK--PFSKLNSTI 606


>gi|297545340|ref|YP_003677642.1| prolyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843115|gb|ADH61631.1| prolyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 570

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R +L  G         R+  ++   IR   +  G   +    L  ++ L K  
Sbjct: 26  MLKAALMR-KLASGVYIYLPLGQRVLRKVEQIIREEMDRAGSQEVLMSALIPAELL-KES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +F L+D + +   L  
Sbjct: 84  GRWDVFGPEMFKLKDRNERDFCLGP 108



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 26/149 (17%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGI+R + A+              ++     +++     +       +     L+  
Sbjct: 441 CYGIGINRTVAAIIEQNHDDKGIIWPMSVAPYHVIIVPVNVSNEAQNGVAEDIYAALQKE 500

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           GI   +     +  G +   AD    P+ I  G    S G+++IK L + +E        
Sbjct: 501 GIEVLIDDRDLRA-GVKFNDADLLGIPIRITVGKK-VSDGIVEIK-LRENEEAE------ 551

Query: 464 ESWREARVAQITIPISELVSTVKKILQEN 492
                       + IS++V  VK I++E 
Sbjct: 552 -----------EVKISDVVEKVKNIIKEK 569


>gi|255718077|ref|XP_002555319.1| KLTH0G06468p [Lachancea thermotolerans]
 gi|238936703|emb|CAR24882.1| KLTH0G06468p [Lachancea thermotolerans]
          Length = 1710

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 122/427 (28%), Gaps = 50/427 (11%)

Query: 15   FADCP---------TKEIRIRNRILDSIRNIYENYGFDPI-ETPLLEYSDSLGKFLPDED 64
              D                +++++++ I  I++ +G     E P++        F     
Sbjct: 1069 TNDILFDNHKVFSTPFNQLLKSQMMEEIVKIFKRHGGIENNEPPMI--------FPKAPV 1120

Query: 65   RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAE--NFDTIVFPCRTYRIGPVFRNEKHGP 122
               + V+ + D  G  + L+YDLT P+ARY+++  N  +  +  +     P        P
Sbjct: 1121 YSTQNVYEVLDKGGSVLQLQYDLTYPMARYISKGPNCVSKQYRVQYVYRPPQHAQPSTEP 1180

Query: 123  GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK-RNDYHIGINNRKILDGILEK 181
             RF +     +    S     DAE   ++ + +  + I  + +    +N+  IL+ +   
Sbjct: 1181 RRFVEVDFDIITPPNSETPLYDAESIKVIDEIIIQLPIFGKTNTIFAVNHADILESVFNF 1240

Query: 182  IGLHGDDKLNERLIVLRAIDKLDKFG-LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +    +     ++ +             +K +L    T  +        L  E     
Sbjct: 1241 CSIDKAQRSLVSHMLSQVGFAKTFKDVKNELKSVLNISSTSLNDLELFDFRLDFESARKR 1300

Query: 241  VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +  + +D                  E+    +  +   ++    + N I    +      
Sbjct: 1301 LQKVMMDSP-----------FLAKVEESLQYISKVINFLKPLKVSRNIIICPISNYNWGF 1349

Query: 301  YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
            Y    +++AI                                     A GF++    ++ 
Sbjct: 1350 YKGNIMFQAIYDDDKSRSLIAAGG-RYDSLISLIARPSGGKINNIQRAVGFNLAWETILA 1408

Query: 361  ALK---------------SLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAG 404
              +               SL        +     +         L+         L  AG
Sbjct: 1409 VAQNYFKLATGKSTKKRSSLMKDVPLEWKPMRCEVLVSSFSKTILNTIGVETLNQLWKAG 1468

Query: 405  IRAEMFL 411
            I A+   
Sbjct: 1469 ISADFVH 1475


>gi|110589518|gb|ABG77268.1| histidyl-tRNA synthetase class IIa [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 207

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
               G+V  GGR+DGLV +  G+ VPA GF++G+ RLI  L+  + +    +        
Sbjct: 52  LGAQGTVCAGGRFDGLVEQLGGRRVPAVGFAMGLERLIALLEETDLAERPARHRPLSGDG 111

Query: 382 TMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
                    +      + LR     +R  +      +F +Q K AD+ N   A+I G  E
Sbjct: 112 GGAGARRGRACCWQ--ERLRDQLPKLR-LIAHCGGGSFKSQFKKADKSNARYALILGDDE 168

Query: 440 RSRG 443
            + G
Sbjct: 169 LAPG 172


>gi|237753438|ref|ZP_04583918.1| ATP phosphoribosyltransferase regulatory subunit [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229375705|gb|EEO25796.1| ATP phosphoribosyltransferase regulatory subunit [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 296

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 6/118 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+P+G      K  R++  I      I    G++ I TP   Y +   +     D  
Sbjct: 3   LSHEIPQGCKLYFGKSARLKREIETLASTILYKNGYEEIITPAFAYLE-YQR-----DIK 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           ++ V    +     I+LR D T    R +A +        R + I P+F        +
Sbjct: 57  SREVVRTNNQYNHQIALRNDSTIDTIRLLAPHLRENALSKRWFYIQPIFIYPTTEIHQ 114


>gi|301117140|ref|XP_002906298.1| serine/threonine protein kinase [Phytophthora infestans T30-4]
 gi|262107647|gb|EEY65699.1| serine/threonine protein kinase [Phytophthora infestans T30-4]
          Length = 1473

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 83/511 (16%), Positives = 160/511 (31%), Gaps = 79/511 (15%)

Query: 21   KEIRIRNRILDSIRNIYENYGFDPIETPLLEY--SDSLGKFLPDEDRPNKGVFSLQDDDG 78
             ++R +  + + ++ ++E +G   + TPLL    S+     +     PN  +  + D +G
Sbjct: 768  AQLRTKTYVRNVLQKVFERHGAVEMSTPLLMPRLSEQTFNGITLNAPPNASM--MLDGNG 825

Query: 79   QWISLRYDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
              +SL +DLT  LAR+VA +    +   +        V              I  D    
Sbjct: 826  VSVSLPFDLTERLARFVARHNVLRLKCFQFDRVYRKSVGGGHPREFNESDFDIIWDDGGS 885

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN----- 191
                E    E+   +   L +       Y++  N+ ++  GIL+   +    +       
Sbjct: 886  FRFLELEGLEVVSGVIRALPS---HLGSYYLRFNDARVTRGILDLCRVPSSARREVLRLL 942

Query: 192  --------ERLIVLRAIDKLDKFGLQGVKLLLGEGRT-DNSGDFTKGANLTSEQIDIMVS 242
                               L     + V   L       +  +  K   L  E     + 
Sbjct: 943  SNEVSFYVHARPPSTQAPSLKPSRWKFVAKRLKHYGAPPSVIEALKPFFLLPEDCLTSLD 1002

Query: 243  FLSIDLEKSMHELYEL---------------------------VKGTIAGEKGFNELVVI 275
             + ++++K   +   L                           VK  I G      L+  
Sbjct: 1003 MIELEVQKLFAKNRALTTRDSTTDGDAADRKQIQKRDAQLRRVVKDVIEGITSLRLLLQG 1062

Query: 276  SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPV-----------V 324
             + ++ SG    R+ +     R   Y +G +++AIL     N                  
Sbjct: 1063 MQFLQLSGPVCTRLDLG-LSPRPERYSSGFIFQAILLEESTNGGNNGGKIASLLVAATDN 1121

Query: 325  FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA----------------LKSLESS 368
               +  GGRYD LVSRF+     A   ++    +  A                L+    +
Sbjct: 1122 QIIIAEGGRYDALVSRFQLTTAYAKSSAVAAMGVRFAIDKIVSLLAESMGSTLLELKSPA 1181

Query: 369  TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +  +     VLI +    SD++        +L   GI A+       +  +   Y  ++N
Sbjct: 1182 SEVLTGGRKVLICSAGKASDTMLFRMQIAMLLWGQGIGADYLHPEPLHLEDLEDYCAQQN 1241

Query: 429  CPLAIIQGTGER-SRGMLQIKDLAKGKELSR 458
                +I        +  ++I+ +    E   
Sbjct: 1242 VHWMVIVQKHMIRDKQQVKIRAVKSHSEADV 1272


>gi|296124433|ref|YP_003632211.1| threonyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296016773|gb|ADG70012.1| threonyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 736

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/462 (11%), Positives = 117/462 (25%), Gaps = 30/462 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   +R  + + I+      G+ P+ TP +   +            +     L   D
Sbjct: 281 WLPKGATVRALLEEFIKGELLKRGYQPVYTPHIGRVELYETSGHFPYYRDSQFTPLYGHD 340

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G  +    D      R + +N  +            +   E                   
Sbjct: 341 GGQLI---DF---WIRKLQDNAISEADEKSLLASAKILGVEIPEYAAASGNPAKIEVLRT 394

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
              +     +  M       +       +  +  R    G + +    G+     R+  L
Sbjct: 395 WEKQQERYLLKPMNCPHHAQIYKSMQRSYRDLPVRLAEFGTVYRHEQSGELNGMLRVRGL 454

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D       + V+    E R          A++  E   + +S      +K +     
Sbjct: 455 TQDDAHLFCTPEQVEE---EFRATLQLVQFVLASVGLEDYRVQLSLRDPKSDKYVGSEEN 511

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             +   +      EL +                   +   I R  +  T    +     P
Sbjct: 512 WQRAEASLRGVLTELNLPFTAREGEAAFYGPKADFMVKDCIGREWQLGT---VQLDYNLP 568

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
              + +              D    R    +    G         + ++    +      
Sbjct: 569 ERFQLEYVGA----------DNQAHRPVMIHRAPFGSM--ERFTGMLIEHFAGAFPLWLA 616

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V + ++          +   +  R AG R    L  +K    +++ A     P  ++
Sbjct: 617 PEQVRVLSIS--DKFEGYAREVEREFRAAGFRVTTDLRGAK-INGKIRDAQIELIPYMLV 673

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            G  ++    + I+D  +G   +  +    +  +  V +  I
Sbjct: 674 VGGKDQENRTVSIRDRIEGDLGAVPLAEAITRLQQEVTEKRI 715


>gi|299135910|ref|ZP_07029094.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298602034|gb|EFI58188.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 680

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 64/483 (13%), Positives = 127/483 (26%), Gaps = 99/483 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  + D +R      G++ + TP +   + L K    E   +  ++  
Sbjct: 297 GLIFWHPKGGLIRKTMEDWMRAECVRRGYNLVVTPHIMRRE-LWKISGHEGYYSDNMYPP 355

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D     L+             +        ++YR  PV   E     R+ +      
Sbjct: 356 MELDDAEYRLKPMNCPG-------HILIYKNSPKSYRDLPVRYAELGNVYRYER------ 402

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                                           H  +  R                +    
Sbjct: 403 ----------------------------SGTMHGLLRVRGFTQDDAHIFCTPDQIEDEVV 434

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
             +  A   L  FG    K+ L         D+T  A+  +  I+ + + L       + 
Sbjct: 435 ACIEFAQSVLTTFGFADFKVELSTWDPKKPQDYTGSADHWATAINSLKTALGRKNIPFVE 494

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
              E                               +K+   + R  +  T    +     
Sbjct: 495 IPGEA----------------------AFYGPKIDVKLVDVLGRLWQLST---VQFDFNL 529

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P   E +              DG   R    +    G    + R    L    +    + 
Sbjct: 530 PARFELEYIGE----------DGERHRPVMVHRALFGS---VERFFGVLIEHYAGAFPMW 576

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                +      +   L+  +     L  AG+R E+  G +     +++    +  P  +
Sbjct: 577 LAPVQVGLVPISNEKHLAYAESVKARLEAAGLRVELD-GGNGKMNAKIRDFGLQKFPFIL 635

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E +   + ++  AKG E S                  + + E ++  KK++  + 
Sbjct: 636 VLGDKEAASDSVSVRVRAKGDEGS------------------VTVDEFIARAKKLVDGHA 677

Query: 494 EEI 496
            E+
Sbjct: 678 MEL 680


>gi|224475774|ref|YP_002633380.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420381|emb|CAL27195.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 635

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/382 (10%), Positives = 104/382 (27%), Gaps = 16/382 (4%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           + A N   I    +       F  +           +    N G      D      + +
Sbjct: 261 FYAHNGQVIRLELQNMLRQLQFEADYEEVYTPFIMDETLWKNSGHWDHYQDNMYFTEVDE 320

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
              A+       H+ I    +             D         +         L G+  
Sbjct: 321 QTYALKPMNCPGHMLIYKNHLH---------SYRDLPIRMAEFGQVHRHELSGSLNGLFR 371

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV---KGTIAGEKGFN 270
           +      D++  F +   + SE +D++     +          EL       +   + ++
Sbjct: 372 VRT-FNQDDAHIFVRRDQIESEILDVLGLIHKVYSVFGFDYSIELSTRPDDFMGEIELWD 430

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
                 E +         +        G +       +A+         Q          
Sbjct: 431 FAEQSLENMLNQHGFKYTVNEKDGAFYGPKIDIHIK-DALGRSHQCGTVQLDFQMPEKFD 489

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
               +    + +   +    +      + + L+    +         + +  ++ D   L
Sbjct: 490 LTFINQAGEKERPVVIHRAIYGSSDRFIGILLEHFGGNLPLWLAPVQMEVILVNAD-LHL 548

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +   + L+  G R E+ L S +  G +++ A  +  P  ++ G  E   G + ++  
Sbjct: 549 DAVKDLKRRLKKEGFRVELDL-SDEKMGYKIRQAHLKKVPYTLVVGDNEVENGTVAVRKR 607

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +E S  +++     +  V 
Sbjct: 608 GESEEHSINVEDFVKQLKEEVD 629



 Score = 48.7 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/258 (10%), Positives = 67/258 (25%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  + + +R +     ++ + TP     ++L K     D     ++  
Sbjct: 258 GMPFYAHNGQVIRLELQNMLRQLQFEADYEEVYTP-FIMDETLWKNSGHWDHYQDNMY-F 315

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D Q  +L+             +         +YR  P+   E     R       + 
Sbjct: 316 TEVDEQTYALKPMNCPG-------HMLIYKNHLHSYRDLPIRMAEFGQVHRHELSGSLNG 368

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +        +       H   +             +    + ++ 
Sbjct: 369 LFRVRTFNQDDAHIFVRRDQIESEILDVLGLIHKVYSVFGF------DYSIELSTRPDDF 422

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +  +   D  ++     +     +   +       G  +     D +         +   
Sbjct: 423 MGEIELWDFAEQSLENMLNQHGFKYTVNEKDGAFYGPKIDIHIKDALGRSHQCGTVQLDF 482

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E    T   + G  E
Sbjct: 483 QMPEKFDLTFINQAGEKE 500


>gi|258423896|ref|ZP_05686781.1| prolyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845925|gb|EEV69954.1| prolyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 567

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 66/542 (12%), Positives = 144/542 (26%), Gaps = 81/542 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E      I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  LQD  G+  +L     +L   + R   +++  +       +         
Sbjct: 86  WGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E      ++   Q            A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGS 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------R 198
                 A+     D  +          I +   ++  +  +  +  L             
Sbjct: 206 HTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELY 256
             D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+ 
Sbjct: 266 LADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           I+ ++ R         +
Sbjct: 324 NLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVSVGRDFNVDEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIG 354
             IL    +++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+              ++      LI+      D     +              
Sbjct: 444 ISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELAEALYAEF-NTKFDV- 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    PL I+ G    S G++++K+   G      I +  +   
Sbjct: 502 LYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVIT 560

Query: 469 AR 470
            +
Sbjct: 561 NK 562


>gi|261418266|ref|YP_003251948.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767774|ref|YP_004133275.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374723|gb|ACX77466.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112640|gb|ADU95132.1| threonyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 652

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 58/462 (12%), Positives = 125/462 (27%), Gaps = 83/462 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+D + TP+L   +   K     D   + +F  
Sbjct: 265 GLPLWLPKGATIRRIIERYIVDKEVALGYDHVYTPVLGSVELY-KTSGHWDHYKENMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEELVLRPMNCP-------HHMMIYKSKLHSYRELPIRIAELGTMHRYEMS----- 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A   +  +   TL    I      I    +++++ ILE     G ++ + R
Sbjct: 372 --------GALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKDFGIEEYSFR 423

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L      DK   +    +     E       +      L   + +   +F    L+    
Sbjct: 424 LSYRDPHDKEKYYDDDEM----WEKAQRMLREAMDELGLDYYEAEGEAAFYGPKLDV--- 476

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           ++   +           + ++  E    +    +       ++      T   + A L  
Sbjct: 477 QVRTALGKDETLSTVQLDFLLP-ERFDLTYIGEDGKPHRPVVIHRGVVSTMERFVAFLIE 535

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                 +    F +                                              
Sbjct: 536 ------EYKGAFPTWLA------------------------------------------- 546

Query: 374 EMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
              PV +  +    ++ L       + L+  G R E+     +  G +++ A  +  P  
Sbjct: 547 ---PVQVKVIPVSPEAHLDYAYDVQRTLKERGFRVEVD-ERDEKIGYKIREAQMQKIPYM 602

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E S   + ++   + +  +  +    +     V + 
Sbjct: 603 LVVGDKEVSERAVNVRRYGEKESRTMGLDEFMALLADDVREK 644


>gi|117923678|ref|YP_864295.1| threonyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|259516564|sp|A0L4J6|SYT_MAGSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|117607434|gb|ABK42889.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Magnetococcus
           sp. MC-1]
          Length = 648

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 67/469 (14%), Positives = 131/469 (27%), Gaps = 90/469 (19%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  RIR  I D  ++ +   G++ + TP +     L       D  +  +FS 
Sbjct: 263 GLVFWHPRGSRIRRVIEDFWKDRHVEAGYEFLYTPHIANRQ-LWNTSGHTDFYSDSMFSP 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D Q   +R                   F    Y+       E               
Sbjct: 322 MEVDEQAYQIRP--------------MNCPFHILIYKDRRHSYRELPFR----------- 356

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
              G        EM   +       G  ++D HI    ++I + I   + L  D      
Sbjct: 357 --WGELGTVYRYEMSGALHGLFRVRGFTQDDAHIFCTEQQIEEEIQRILDLTLD-----I 409

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L      D       +  K +      D + +  + A ++ +     +S++  +   +  
Sbjct: 410 LRTYGFSDFEINLSTRPEKSVGSAAIWDKATEALRRAIVSRD-----LSYVVDEGGGAF- 463

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILG 312
                                              +KI+ +I R  +  T    +     
Sbjct: 464 -----------------------------YGPKIDVKITDSIGRKWQCSTVQLDFNLPER 494

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    +       +                          + R    L    +    +
Sbjct: 495 FDMGYIGEDGESHRPIMIHRA-----------------LMGSLERFFGILVEHYAGWFPM 537

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV            +  +     L+ AG+R E+ L  ++  G +++    +  P  
Sbjct: 538 W-LAPVQAVVCSITDAQHAYAETVLAALKKAGLRVEIDL-RNEKVGYKIREHTLKRVPYL 595

Query: 433 IIQGTGERSRGMLQIKDLAKGKEL-SREIKNNESWREARVAQITIPISE 480
           ++ G  ER  G + ++ L  GK L S  I++         A   +  SE
Sbjct: 596 LVVGDKEREEGTVNVR-LRSGKSLGSLPIQDVVERLVEEAASRALSASE 643


>gi|212703017|ref|ZP_03311145.1| hypothetical protein DESPIG_01055 [Desulfovibrio piger ATCC 29098]
 gi|212673605|gb|EEB34088.1| hypothetical protein DESPIG_01055 [Desulfovibrio piger ATCC 29098]
          Length = 576

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 46/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        ++    +   +R   +  GF  +  P++   D L K     +  
Sbjct: 31  MVRKLTSGVYIYLPLGLKALENVQRVVREEMDAAGFSELLMPMVIPGD-LWKETGRWEYY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +   +D + +   L         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRFKDRNDRDYCLGPTHEEVITDLVRGEVRSYRQLPVRLYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D+  + A+ +   M        + +G
Sbjct: 150 MRGREFVMKDAYSFDSSDAGADESYKLMYDAYCRIFKRLG 189



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 1/97 (1%)

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
               +  +K +    ML  AG+   +     +  G + K AD    P+ ++ G    SRG
Sbjct: 478 PGKEEVRAKAEEIYAMLCKAGVTVLLDDREER-PGVKFKDADLIGAPMQLVLGGKGLSRG 536

Query: 444 MLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           +L+ KD   G++    +   E+     +  +    +E
Sbjct: 537 VLECKDRRTGEKGELPVDALETALPQWMEGVRKAWAE 573


>gi|56421254|ref|YP_148572.1| threonyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|297529120|ref|YP_003670395.1| threonyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|73919792|sp|Q5KWD2|SYT_GEOKA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56381096|dbj|BAD77004.1| threonyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|297252372|gb|ADI25818.1| threonyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 652

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 58/462 (12%), Positives = 125/462 (27%), Gaps = 83/462 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+D + TP+L   +   K     D   + +F  
Sbjct: 265 GLPLWLPKGATIRRIIERYIVDKEVALGYDHVYTPVLGSVELY-KTSGHWDHYKENMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEELVLRPMNCP-------HHMMIYKSKLHSYRELPIRIAELGTMHRYEMS----- 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A   +  +   TL    I      I    +++++ ILE     G ++ + R
Sbjct: 372 --------GALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKDFGIEEYSFR 423

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L      DK   +    +     E       +      L   + +   +F    L+    
Sbjct: 424 LSYRDPHDKEKYYDDDEM----WEKAQRMLREAMDELGLDYYEAEGEAAFYGPKLDV--- 476

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           ++   +           + ++  E    +    +       ++      T   + A L  
Sbjct: 477 QVRTALGKDETLSTVQLDFLLP-ERFDLTYIGEDGKPHRPVVIHRGVVSTMERFVAFLIE 535

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                 +    F +                                              
Sbjct: 536 ------EYKGAFPTWLA------------------------------------------- 546

Query: 374 EMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
              PV +  +    ++ L       + L+  G R E+     +  G +++ A  +  P  
Sbjct: 547 ---PVQVKVIPVSPEAHLDYAYDVQRTLKERGFRVEVD-ERDEKIGYKIREAQMQKIPYM 602

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E S   + ++   + +  +  +    +     V + 
Sbjct: 603 LVVGDKEVSERAVNVRRYGEKESRTMGLDEFMALLADDVREK 644


>gi|296282100|ref|ZP_06860098.1| threonyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 669

 Score = 69.5 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/456 (10%), Positives = 123/456 (26%), Gaps = 69/456 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  +I  ++   +R   +  G+  I+TP +  +    +      +  + +F +
Sbjct: 270 GSVFWHPQGYKIWRQLESYMRRKMDGAGYREIKTPQVMDARQ-WEQSGHWGKYRENMFVI 328

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D                                          E        + +  D 
Sbjct: 329 PD------------------------------------------EVPNTEDEGELVSKDA 346

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           D +        A + +          +      +G  +R    G L  +      +  + 
Sbjct: 347 DWMALKPMNCPAHVLVFKQGITSYRELPIRLGEMGCCHRNEPHGALHGLMRV--RQFTQD 404

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +K     ++    L      D    +     L  EQ            +    
Sbjct: 405 DAHIFCTEKQVVEEVRAFIELADAVYRDFGFKYAIKLALRPEQR--------FGSDADWD 456

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  + ++  +A     N+     EL  +  + + +++   T   G  +  G +    +  
Sbjct: 457 KAEQELRDAVAEAGMMNDEYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLP 516

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             ++                      + +   +    F      + + ++          
Sbjct: 517 ERLDASYIGED-------------GEKHRPVMLHRAIFGSYERFIGILIEHFAGKLPVWL 563

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                ++ T+  D+D           LR AGIRAE  L  ++    +++       P  +
Sbjct: 564 APTQAVVATIVSDAD--DYASEALAKLRAAGIRAESDL-RNEKINYKVREHSLAKVPHLL 620

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           + G  E   G + ++ L + ++    +    +    
Sbjct: 621 VVGKREAEEGTVAVRTLGEREQRVMSLDEAIAMLRD 656


>gi|210075304|ref|XP_500907.2| YALI0B14949p [Yarrowia lipolytica]
 gi|199425180|emb|CAG83158.2| YALI0B14949p [Yarrowia lipolytica]
          Length = 1641

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 73/449 (16%), Positives = 150/449 (33%), Gaps = 60/449 (13%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIET-PLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
            +  ++ ++++ I   + N+G   +   PLL     + K        +  V S+ D  G  
Sbjct: 1019 DSLLQAQMIEQIEATFRNHGAIKVNNRPLLFPKSLIYK--------SPNVVSVLDQAGTI 1070

Query: 81   ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            + L +DLT P AR +A+             +     N      R    I  D+    S+ 
Sbjct: 1071 LQLPFDLTLPHARMLAKGQTYYHKSFCCDYVYRADENNVVSHPRRFGEIDFDIVTQDSTD 1130

Query: 141  ETADAEMCMMMADTLEAV--GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
                    + + D +  +    K N+  I IN+  IL  IL+   +    +       LR
Sbjct: 1131 LPLYDAEAIRVLDQVIQLFPSFKNNNVVIYINHWDILQTILDSCRIGQAQRAVA----LR 1186

Query: 199  AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID----LEKSMHE 254
             +D+  +   + V             +     ++ +  +D + SF   D     E+ + +
Sbjct: 1187 LLDETGQAPARQVVKE----------ELRTKYSVGATALDDLESFGFRDDIDKAEQRLRK 1236

Query: 255  LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
            + E  + T    + F  +  +S  +++ G          +      Y +G +++A++   
Sbjct: 1237 MIEGSEHTTRLTESFLWIRKVSTYLKRFGCTRRVYVAPLSNYNEDFYRSGLMFQAVVEDT 1296

Query: 315  VMNEKQKPVVFGSVGGG--GRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNN 371
               ++   +  G        R+             A GF++    +  ++K+  ++    
Sbjct: 1297 APQKRTSILAVGGRYDRLITRFRHESLDRGVPRTHAVGFNLAWESIFDSMKAYRDALMKK 1356

Query: 372  IKEMGPVLITTMDHDSDSLS-----------------------KYQMYTQMLRTAGIRAE 408
             K+ G V + +    S +L                              + L  AGIRA+
Sbjct: 1357 QKKKGTVQVLSTSTSSSALELQRWYPSRCDALVTSFNSNTLRTVCLDVLKDLWGAGIRAD 1416

Query: 409  M--FLGSSKNFGNQLKYADRRNCPLAIIQ 435
            +     SS+        A        II 
Sbjct: 1417 LCRDCSSSEELVA---RAQSEGINWIIIV 1442


>gi|84498663|ref|ZP_00997420.1| prolyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84381060|gb|EAP96946.1| prolyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 593

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 19/129 (14%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDH----DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           L  L            V +         D D  +K    T  L   GI          + 
Sbjct: 476 LDDLGLIWPRAVTPADVHVVATGKNRDRDGDVFAKADEITASLEAQGISVLYDDREKVSP 535

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           G + K ++    P  ++ G      G+++IKD   G+     + +               
Sbjct: 536 GVKFKDSELIGIPTIVVVGKS-LENGVIEIKDRRSGERREVAVDSV-------------- 580

Query: 478 ISELVSTVK 486
           I E+++ V+
Sbjct: 581 IDEVLAEVR 589



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+  ++   +R   +  G   +  P L   E  ++  ++    D     +
Sbjct: 38  GIYTWLPLGLRVLRKVEAIVREEMDAIGAQELTFPALLPREPYEATNRWTEYGDN----I 93

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 94  FRLKDRKGGDYLLGP 108


>gi|289548737|ref|YP_003473725.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182354|gb|ADC89598.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 645

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 2/139 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
              Y G  +R     +        I R    L    +       + PV +  +      +
Sbjct: 496 DMEYVGPDNRRHRPYMIHRAILGSIERFTGVLLEHHAGLLPFW-LAPVQVRVLPVQERHV 554

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +     LR  G R E+     +  G +++ A+ +  P  +I G  E   G + ++  
Sbjct: 555 EYARSVANTLREEGFRVEVD-ERDERLGAKIRDAELQKIPYVLIVGDKEMQDGSVSVRGK 613

Query: 451 AKGKELSREIKNNESWREA 469
            +G      +++  S+  +
Sbjct: 614 REGDLGKMSLQDLLSFLRS 632



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 67/228 (29%), Gaps = 13/228 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K    R  + D  R  +   G+  + TP +  +    K     D   + +F   + +
Sbjct: 267 WLPKGGIYRKVLEDYWREEHLKRGYQLVYTPHIGNAKLWQKS-GHLDHYRQNMFPPMELE 325

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +   ++  +  P       +        R+YR  P    E     R+          + 
Sbjct: 326 DEEYFVKP-MNCPF------HIAIYKSKVRSYRDLPFRLAELGTVYRYEMSGVLH-GLMR 377

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
               T D    +   D ++ V  +  D+ I +      D     I    +D +       
Sbjct: 378 VRGFTQDDAHIICRPDQVDDVIQETLDFAISMLRDFGFDEFKVYISTKPEDAIGSDEQWE 437

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
           +A   L     + V+ +  E   D  G    G  +  +  D +     
Sbjct: 438 KAESAL----KKAVESMGLEYEIDEGGGAFYGPKIDVKIRDALGRLWQ 481


>gi|323339586|ref|ZP_08079860.1| threonine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092981|gb|EFZ35579.1| threonine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 685

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 59/468 (12%), Positives = 125/468 (26%), Gaps = 84/468 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   ++G++ + TP+L   D   K     D   + +F  
Sbjct: 300 GLPYWMPNGATIRRTIERYIIDKEVSWGYEHVYTPILANVDLY-KQSGHWDHYREDMFPP 358

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+ + LR             +        R+YR  P+   E              
Sbjct: 359 MDMGDGELLELRPMNCPS-------HIQIYNRHIRSYRDLPLRIAEL------------- 398

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A   +  +   TL           I    ++ L  ++E      D  +N+
Sbjct: 399 GMMHRYEKSGALTGLSRVREMTLNDGHTFVTPDQIEAEFKRTLQLMVEVYH---DFNIND 455

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               L   D  +            +   D+         L +   D+ + +   + E + 
Sbjct: 456 YRFRLSYRDPKNTH----------KYYDDDEMWEKSQRMLKAAMDDLGLEYFEAEGEAAF 505

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               +L   T     G   L  I            +   +             +   +  
Sbjct: 506 -YGPKLDVQTKTALGGEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGIVSTMER 564

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F     +     F +                                +A K +E    N+
Sbjct: 565 FTAYLTEMYKGAFPTW-------------------------------LAPKQVEVIPVNL 593

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                         +  L+      + +R   +  +     ++  G +++ A     P  
Sbjct: 594 DLHTDY--------ARKLASALA-ARQIR---VSVD---DRNEKMGYKIRQAQVNKVPYT 638

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E+ +G + ++    G+E +  +  ++  +       T   +E
Sbjct: 639 LVVGDNEKEQGTVTVR--RYGQEKTETMAFDDFKKILDHDLETYSRNE 684


>gi|169830802|ref|YP_001716784.1| prolyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|226699139|sp|B1I2J1|SYP_DESAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169637646|gb|ACA59152.1| prolyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 566

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 43/157 (27%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  +I+  IR   +  G   I  P+++ ++   +           
Sbjct: 34  KAASGVYTLLPLAHRVLRKIMRIIREEMDRQGGQEILLPIMQPAELWLRS-GRWHVYGPE 92

Query: 70  VFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +F L+D  G+   L         +L     R   +    +      YR     R      
Sbjct: 93  LFRLKDRHGRDFCLGPTHEEIITELVMGDVRSHKQLPLLLYQIQNKYRDERRPRFGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F        D   +  E +  +M           G
Sbjct: 153 REFIMKDLYSFDRDEAGLEVSYRKMFEAYQRVFSRCG 189


>gi|158313600|ref|YP_001506108.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|238686857|sp|A8LE67|SYT_FRASN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|158109005|gb|ABW11202.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 658

 Score = 69.1 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/409 (11%), Positives = 109/409 (26%), Gaps = 49/409 (11%)

Query: 90  PLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
              R V E       I           + +++ +       +    +         AD  
Sbjct: 288 GAIRTVMEDYSRRRHIEAGYEFVNTPHITKSDLYEISGHLDWFADGMYPPMQLDGGADYY 347

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  M       +   R   +  +  R    G + +    G      R+  L   D     
Sbjct: 348 LKPMNCPMHILIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFC 407

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
             + +   L     D    F  G        D  +   +    K++    E  + T    
Sbjct: 408 AREQLPTEL-----DTVLKFVLGLLRDYGLEDFYLELSTRPPGKAIGSDKEWEEATELLR 462

Query: 267 KG--FNELVVISELVR-KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKP 322
           +     +L ++ +            ++    I R  +  T    ++    F +  +    
Sbjct: 463 EAASKQDLELVMDEGGGAFYGPKISVQARDAIGRTWQLSTIQVDFQLPQRFDMTYQAADG 522

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                                  +    F        + L+    +      + PV +  
Sbjct: 523 TRQRPFM----------------IHRALFGTIERFFAILLEHYAGALPPW--LAPVQVVG 564

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +    + +         LR  GIR E+     +    +++ A ++  P  ++ G  + ++
Sbjct: 565 IPITDEHVPYLTDVAAKLRQRGIRVEVDSSDDR-MQKKIRTAQKQKVPFMLLAGDEDVAK 623

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           G +  +    G + +                  +P+ E V+ +   ++ 
Sbjct: 624 GAVSFR-FRDGTQRNG-----------------VPVDEAVAEILDAVER 654


>gi|227495497|ref|ZP_03925813.1| threonine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831044|gb|EEH63427.1| threonine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 665

 Score = 69.1 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 46/122 (37%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +   + LR  G+R E+     + FG +++ A +   P  +
Sbjct: 563 WLAPVQVRCIPVAEKFEDYLEEIAKQLRAEGVRVEIDRSDDR-FGKKIRNASKDKVPFTL 621

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +     +  + L  G + +                  +P++E V  +  +++E +
Sbjct: 622 IAGGDDVDANAVSFR-LRDGSQDN-----------------QVPVAEAVERILTVIRERR 663

Query: 494 EE 495
            +
Sbjct: 664 ND 665


>gi|223044242|ref|ZP_03614279.1| prolyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442392|gb|EEE48500.1| prolyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 567

 Score = 69.1 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 63/541 (11%), Positives = 152/541 (28%), Gaps = 81/541 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I + +R   E+     I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNISNIVREEMESIDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  L+D +G+  +L     ++   L R   +++  +       +         
Sbjct: 86  WGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRDELKSYKRLPLTLFQIQSKYRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E+     ++                A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEESLDATYQDMYNAYSKIFKRVGINARPVVADSGAIGGN 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR------------ 198
                 A+     D  +  N       I +   ++   + +     L             
Sbjct: 206 HTHEFMALSEIGEDTIVYSNESDYAANIEKAEVIYHPSEKHTETAELSKIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELY 256
             D L++   + VK ++ +   +      +G +  ++    + ++   +  +  S  E+ 
Sbjct: 266 LADFLNRPLDEIVKTMIFKVDGEFIMILIRGHHELNDV--KLKAYFGTENVEMASQDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           +++ + R         +
Sbjct: 324 NLVGANPGSLGPIHNKEIKIYADNYVKDLNNLVIGANEDGYHYVNANVERDFNIDEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIG 354
             IL   ++++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEMLSDGSGKAQFAEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+    +         ++      LIT      D           L   G    
Sbjct: 444 ISRTLSAIVEQNNDDNGIIWPKSVTPFDLHLITINPKKDDQRELGDQLYDQL--NGKFDI 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    P+ ++ G      G++++K    G+     + + E++ +
Sbjct: 502 LYDDRKERAGVKFNDADLIGLPMRVVVGKR-AEEGIVEVKQRLSGESEEIHVNDLENYLK 560

Query: 469 A 469
            
Sbjct: 561 D 561


>gi|184201256|ref|YP_001855463.1| prolyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|226701301|sp|B2GKS1|SYP_KOCRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183581486|dbj|BAG29957.1| prolyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 606

 Score = 69.1 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 1/118 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +       + L   +     L  AG+          + G + +
Sbjct: 490 DEHGLLWPRNLSPADVHVVATGKGPEVLEAAEEIVAHLEAAGVSVLFDDRPKVSPGVKFR 549

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            A+    P  ++ G    + G+L++KD   G           +   A +     P +E
Sbjct: 550 DAELLGVPTVLVVG-RGLADGVLELKDRRSGTSRDIARDRVVAEITAELQGQEGPAAE 606



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        + +  R+   +R   +  G   +  P L   E  ++  ++        + +
Sbjct: 40  GIYTWLPLGLAVLRRVEGIVREEMDAIGAQEVHFPALLPREPYEASNRWTE----YGENL 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G    L  
Sbjct: 96  FRLQDRKGADYLLAP 110


>gi|319957838|ref|YP_004169101.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor
           salsuginis DSM 16511]
 gi|319420242|gb|ADV47352.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor
           salsuginis DSM 16511]
          Length = 605

 Score = 69.1 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 45/122 (36%), Gaps = 2/122 (1%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
             R I  L    +       + P  +  +   ++  +  +   + L    I +E++  + 
Sbjct: 486 FERFIAILTEHYAGEFPFF-IAPTQVIFVPIAAEHTAYAKELAEALMEREIDSEIYDRND 544

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +   +++ A+++  P  +I G  E     + ++D  K ++ +    +        + + 
Sbjct: 545 -SLNKRIRLAEKQKVPYVVIVGDEEVKNRSVAVRDRRKKEQYNLSADDFMLQLSKELQEG 603

Query: 475 TI 476
            I
Sbjct: 604 KI 605



 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R+++   +   +   G++P+  P +  +D + +         + ++ L
Sbjct: 231 GLPFWLPKGARLRSKLEQILWRSHRRRGYEPVRGPEILKAD-MWRTSGHYACYGENMY-L 288

Query: 74  QDDDGQWISLRY 85
            + DGQ   L+ 
Sbjct: 289 TEIDGQEYGLKP 300


>gi|304319826|ref|YP_003853469.1| prolyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303298729|gb|ADM08328.1| prolyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 446

 Score = 69.1 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/491 (11%), Positives = 127/491 (25%), Gaps = 80/491 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++  ++   +R   E  G   +  P ++ + SL       D  
Sbjct: 31  MVRQQAAGIYAWLPLGLKVLKKVEAIVREEQERAGVAELLMPTIQPA-SLWHQSGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D  G+ +       ++   L R   +++  +      + I   FR+E     
Sbjct: 90  GPEMLRLKDRHGRDMLYGPTNEEMITELVRAGIKSYKELPK--TLFHIQWKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S                         D       R  L      + 
Sbjct: 148 GVMRGREFLMKDAYSF------------------------DLSPEAARRSYLRFFAAYLR 183

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                 +    +         K   + V L           +      L  +        
Sbjct: 184 TFARLGVKAIPVRADTGPIGGKLSHEFVVL-----AETGESEVFTAKGLVEKTPPPTSLD 238

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              DLE    E       T         L +  +          R++     V  + Y+ 
Sbjct: 239 YDGDLEPLFAEWTGTYAATDEMHDEAAFLALPEDQ---------RLQARGIEVGHIFYFG 289

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
               E +       + +  V  GS G G             +     + + ++   V L 
Sbjct: 290 TKYSEPMQFAVEGPDGRAFVEMGSYGIGVSRLVGALIEAHHDDQGCRWPVPVAPYEVGLV 349

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           +L++  +        L        ++++                 +   S    G +   
Sbjct: 350 NLKTGHDGTDGACHRLY------DEAVAAGLDV------------LLDDSGDRAGEKFAR 391

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            D    PL +  G      G  ++KD   G                  A+  +P++ LV 
Sbjct: 392 MDLIGLPLIVTIGPRGVEAGQAEVKDRRTG------------------AKQEVPLTGLVD 433

Query: 484 TVKKILQENKE 494
            ++  +   + 
Sbjct: 434 YLRSAILPQRR 444


>gi|58262126|ref|XP_568473.1| hypothetical protein CNM01750 [Cryptococcus neoformans var.
            neoformans JEC21]
 gi|57230646|gb|AAW46956.1| conserved hypothetical protein [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1447

 Score = 69.1 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/475 (12%), Positives = 137/475 (28%), Gaps = 41/475 (8%)

Query: 29   ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
            ++  + ++++ +G      PLL    +L    P+ D        L +  GQ + L     
Sbjct: 952  VIQRLVDLFQRHGAVETYLPLLIPETTLLDAFPNLDPV-----RLIEKSGQVVQLPSSDV 1006

Query: 89   APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
              + R         +      R     +                     ++AE    E+ 
Sbjct: 1007 LAMGRSATRRQIERIKRYHVGRKYTEHQLGGQPVISGLLSFDIVSPIRSAAAEAECLEVV 1066

Query: 149  MMMADTLEAV-GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR-AIDKLDKF 206
              +      + G    +Y   +++  +LD IL+ I    D    + L   R         
Sbjct: 1067 DKVISEFRGMRGTSSVEYEFHVSHETVLDAILDIIPDRPDKPRLKVLEQFRNLGASNSAN 1126

Query: 207  GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
                 + LL                L+   +D +         + + +  E +  + + +
Sbjct: 1127 PSAQSRNLLSNVT-----------GLSRILMDELEQCCIAGDFEVVRKRLESIFTSTSAK 1175

Query: 267  K----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            +      +++  +    R  G     +   +       +  G ++E +      +     
Sbjct: 1176 RKLDTALDDMANVINSARACGVARKILFRPTLAKHSEFFRGGFMFECVRKGKQKDVVAYG 1235

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA-----------LKSL---ESS 368
              + S+     +   V   + + V   G SI + +L              L      +  
Sbjct: 1236 GRYDSLL--EHFKQPVMHSQSRRVFGVGMSIAVDQLARIVSRYESSLSRRLMEKPNEDER 1293

Query: 369  TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +          +         L+        L  AGIRA+      ++     +    +N
Sbjct: 1294 SFGYWSPARCDVYVASFPQVDLAHRLQIIGELWRAGIRADFQYDDGRSLEEVTQECQDQN 1353

Query: 429  CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
                +I      SR  ++I+ + +  E+               A+ +IP ++  +
Sbjct: 1354 ILYLVIPK---ASRSTIKIRSILRRSEVEVISDQRRIDASYASAEGSIPSAQAAA 1405


>gi|282916523|ref|ZP_06324281.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283770327|ref|ZP_06343219.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282319010|gb|EFB49362.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283460474|gb|EFC07564.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 567

 Score = 69.1 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 66/542 (12%), Positives = 142/542 (26%), Gaps = 81/542 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E      I  P L+ ++ L +    
Sbjct: 28  KSGLIKQST-SGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  LQD  G+  +L     +L   + R   +++  +       +         
Sbjct: 86  WGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E      ++   Q            A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGS 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------R 198
                 A+     D  +          I +   ++  +  +  +  L             
Sbjct: 206 HTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELY 256
             D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+ 
Sbjct: 266 LADFLGRPVDEIVKTMIFKVNGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           I+  + R         +
Sbjct: 324 NLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIG 354
             IL    +++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+              ++      LI+      D                    
Sbjct: 444 ISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV- 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    PL I+ G    S G++++K+   G      I +  +   
Sbjct: 502 LYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVIT 560

Query: 469 AR 470
            +
Sbjct: 561 NK 562


>gi|148253211|ref|YP_001237796.1| ATP phosphoribosyltransferase regulatory subunit [Bradyrhizobium
           sp. BTAi1]
 gi|146405384|gb|ABQ33890.1| ATP phosphoribosyltransferase regulatory subunit [Bradyrhizobium
           sp. BTAi1]
          Length = 386

 Score = 69.1 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 75/372 (20%), Positives = 133/372 (35%), Gaps = 52/372 (13%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           D++   +   G+D  E  +L+ ++       ++ R  K ++   D  G+ + LR DLT P
Sbjct: 14  DTLLQSFAQAGYDRAEPAILQPAEPFLDLSGEDIR--KSLYLTTDASGEELCLRPDLTIP 71

Query: 91  LAR-YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETA------ 143
           +AR Y+A                  +RN + G             +  ++          
Sbjct: 72  VARDYLASARAGHPAGFSYLGPVFRYRNGRPGEFLQAGIESFGRKDHPAADAEMLALAIE 131

Query: 144 ---------------DAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
                          D  +   + D L+   + R       N +  L+  LE++ +    
Sbjct: 132 ATAAAGLAEVEIRTGDVALFTALIDALDLYPVWRRRLIKDFNRKVTLEQDLERLAVASAA 191

Query: 189 KLNERLIVLRA-------------IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN--LT 233
             NE   VL A              D +   G   V         D   + +      L 
Sbjct: 192 TRNEYEGVLAALAGSDRKAALALVTDLMSIAGATAVGGRTVAEIADRFLEQSTLKGGALP 251

Query: 234 SEQIDIMVSFLSI--DLEKSMHELYELVKGT-IAGEKGFNELVVISELVRKSGYNSNRIK 290
            + ++ +  FL+I  +   S+ +L  L     +      + L    +L+ K G +  +++
Sbjct: 252 RDALNTIKRFLAIAGNPIDSVKQLRALAADAKLDIASAIDALEARVDLMAKRGIDLGQVR 311

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPAT 349
            ++   RGL+YYTG  +E           +K      +  GGRYDGL+SR      +PA 
Sbjct: 312 FATAFGRGLDYYTGFEFEL---------HRKDGGDEPLVAGGRYDGLLSRLGAAAPIPAV 362

Query: 350 GFSIGISRLIVA 361
           GFSI +  L   
Sbjct: 363 GFSIWVEGLAQV 374


>gi|20093592|ref|NP_613439.1| glycyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|34395858|sp|Q8TYY9|SYG_METKA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|19886451|gb|AAM01369.1| Glycyl-tRNA synthetase, class II [Methanopyrus kandleri AV19]
          Length = 571

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 45/172 (26%), Gaps = 6/172 (3%)

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
             E   G   E       +  +   +V   V G   Y  ++    G +            
Sbjct: 391 EDELKGGLTVEVDGKEVEVPPECYEIVKEKVTGERFYPHVIEPSYGIDRILYCVLEHNFD 450

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
                +              V +  +   SD +   +   +MLR  G   E     S + 
Sbjct: 451 ----PEEGVFRFPAWLAPIEVGVFPLLKRSDMVEYARRVARMLREEGFTVE--YDDSGSI 504

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           G +   AD    P  +           + I+D    +++  E+         
Sbjct: 505 GRRYARADEIGVPYCVTVDHETLEDDTVTIRDRDTTEQVRVEVDELADVLRG 556



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 1/49 (2%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       ++ +I +  R  Y    GF  IE P L   +      
Sbjct: 30 RGFYDYGPLGALLKRKIEEKWREYYVHKEGFMEIEAPNLLIGEVFEASG 78


>gi|89256041|ref|YP_513403.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314517|ref|YP_763240.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502051|ref|YP_001428116.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010208|ref|ZP_02275139.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|290953930|ref|ZP_06558551.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312679|ref|ZP_06803424.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|114152197|sp|Q2A4E9|SYP_FRATH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|122325457|sp|Q0BMT1|SYP_FRATO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980124|sp|A7NB07|SYP_FRATF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89143872|emb|CAJ79090.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129416|gb|ABI82603.1| proline--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156252654|gb|ABU61160.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 565

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/543 (10%), Positives = 144/543 (26%), Gaps = 78/543 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R+     G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IK 161
             R        F                     M     + L+ +G            I 
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYATYCNILDKIGLAYRPVKADTGAIG 203

Query: 162 RNDYHIGINNRKILDGILEK-----------IGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
            ++ H         + I+             +  +    L++R+     I+K+    ++ 
Sbjct: 204 GDNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKPDLSKRVNSQNTIEKIHTPNIKT 263

Query: 211 VKLLLGEGRTDNSGDFTK-----------------GANLTSEQIDIMVSFLSIDLEKSMH 253
           ++ L  E   D                           L   +I+ +   ++     +  
Sbjct: 264 IEKLCKEMSFDIKKTIKTMVIKDAGGNFFALVIRGDHELNETKINKLDQIIAPYTLATKE 323

Query: 254 ELYELVKGTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E++ +          +        +   +    +       +    +    R +  Y   
Sbjct: 324 EIFSIFNANPGSLGIYNCPISIIADYSAIAITDLVCGANEDDYHFTNVNWDRDVTNYQIA 383

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKG------QNVPATGFS 352
               ++   +  + +  +   +    G        Y   ++          + +    + 
Sbjct: 384 DIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCYG 443

Query: 353 IGISRLIVALKSL---ESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGI 405
            G+SR++ A       E+     + + P  +  +                  Q L   GI
Sbjct: 444 FGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLCQDLLGDGI 503

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              +    ++  G     AD       ++ G     +G+++ K+    ++    I     
Sbjct: 504 DVLLDDRGAR-PGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAELIK 562

Query: 466 WRE 468
             +
Sbjct: 563 LLK 565


>gi|269126329|ref|YP_003299699.1| threonyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311287|gb|ACY97661.1| threonyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 684

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 52/150 (34%), Gaps = 21/150 (14%)

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
           +   +    F        + L+    +      + PV +  +   +  +   +     LR
Sbjct: 552 RPYMIHRALFGSVERFFAILLEHYAGALPPW--LAPVQVVGIPIGASHVPHLEKVVAQLR 609

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             GIRAE+     +    +++ A +   P  ++ G  + S+  +  +    G++ +    
Sbjct: 610 ARGIRAEVDASDDR-MQKKIRNAQKAKIPYMLLAGDDDVSKDAVSFRY-RSGEQKNG--- 664

Query: 462 NNESWREARVAQITIPISELVSTVKKILQE 491
                         +PI E V  + + ++E
Sbjct: 665 --------------VPIPEAVEEIVRAVEE 680


>gi|317154070|ref|YP_004122118.1| prolyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944321|gb|ADU63372.1| prolyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 579

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 53/151 (35%), Gaps = 6/151 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R  N++   +R   +  G   +  P+++ +D L +     D  
Sbjct: 31  MIRKLTSGIYNYLPLGLRSINKVARIVREEMDRAGAMEVSMPMVQPAD-LWQETGRWDYY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            K +  L+D  G+   L     ++   L R   +++  +      Y++   FR+E     
Sbjct: 90  GKELLRLKDRHGRDYCLGPTHEEVITDLVRGEIKSYKQLP--INLYQVQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADT 154
              +  +  + +  S             A  
Sbjct: 148 GLMRGREFIMKDAYSFDRDEAGAETSYWAMF 178



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 1/107 (0%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              +I     VLI+    D    +K     + LR  G+ A       +  G +   AD  
Sbjct: 466 FPPSIAPFEAVLISLGGKDEAVDAKAAELYEQLRVLGVDACFDDRKER-PGVKFAEADLI 524

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             P+ ++ G    + G+++ KD   G+++   I        A   +I
Sbjct: 525 GYPMQLVLGGKGLASGIVEAKDRKTGEKIELPINGFAEAFTAWRKEI 571


>gi|189499158|ref|YP_001958628.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|238692225|sp|B3EKG9|SYT_CHLPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189494599|gb|ACE03147.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 659

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 56/454 (12%), Positives = 116/454 (25%), Gaps = 79/454 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR+ +   ++      G+ P+ TP                  N  ++ 
Sbjct: 274 SGLPIWLPKGAIIRSELEAFLKEEQRKRGYVPVYTPH---------------IGNIDLYK 318

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                G                                                +  Q  
Sbjct: 319 ---RSG----------------------------HYPYYSDSQFPPLTYKDDLGREEQYL 347

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  +            +     L     +    +    +   L+G++   G   DD    
Sbjct: 348 LKPMNCPHHHLIYSSQLRSYRDLPIRMAEFGTVYRHEQS-GELNGLIRARGFTQDDSHIY 406

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                                L+ E              L  + I++ +S    + +   
Sbjct: 407 CRPD----------------QLVDEICAAIDLTKFVFTTLGFDDIEVRLSLHDPENQGKY 450

Query: 253 HELYELVKGTIAG-EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
               E+ K       +  + + +           ++        +             + 
Sbjct: 451 GGTEEVWKQAEKDVREAADRMEINY---VIGIGEASFYGPKIDFIVRDALGRKWQLGTVQ 507

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
              VM E+      GS       DG   R    +    G    + R I  L    +    
Sbjct: 508 VDYVMPERFDLSYIGS-------DGKPHRPVIIHRAPFGS---MERFIGVLIEHTAGNFP 557

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + PV +  +    +  +  +   QML   GIRA++ + S K  G +++ A+    P 
Sbjct: 558 LW-LAPVQVAVLPITEEVHAYAERVHQMLIDNGIRADLDIRSEK-IGKKIREAEVGKIPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            +I G  E     + ++   KG + S  ++  + 
Sbjct: 616 MVIIGQKEADSEEISLRRHRKGDQGSLTLQALKD 649


>gi|307199082|gb|EFN79792.1| Eukaryotic translation initiation factor 2-alpha kinase 4
            [Harpegnathos saltator]
          Length = 1627

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 64/479 (13%), Positives = 155/479 (32%), Gaps = 55/479 (11%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            ++  I   I  I++ +G   + TPLL    +      +          L    G  +S+ 
Sbjct: 1037 LQENIKRKIVEIFKKHGGLCLTTPLLMPKSAQHSSFTESSV------KLMTCTGSVVSIP 1090

Query: 85   YDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
            +DL  P ARY+  N  + +      R+    +     P    +     +  V ++  T  
Sbjct: 1091 HDLRTPFARYIVWNNISHIRRYAIERVFRDKKARGFHPRELYECAFDIISPVANNLMTEA 1150

Query: 145  AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
              + ++     E   ++  +  + +N+  +L  +L   G+  D   +   I+  A D   
Sbjct: 1151 ELIFIIWEIFNELPQVQERNLTVRLNHTSLLQAVLMYCGVEKDKYQDIYSILQNARDGKF 1210

Query: 205  KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA 264
                Q    L+    TD + +       T   +  + S L                    
Sbjct: 1211 SK-FQVQTHLISLCLTDQAMETLFNLLETESSVAKIASVLRT-------ITRRKGDAAGL 1262

Query: 265  GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
             ++G  ++  +   V   G     I +   +   ++ Y+G +Y+          +++   
Sbjct: 1263 AKEGLKDIETVISNVENLGVKW-PITVVPLLTYNVQQYSGVIYQITCELK---HRRRRGG 1318

Query: 325  FGSVGGGGRYDGLVSRF---------------KGQNVPATGFSIGISRLIVALKSLESST 369
               +  GGRYD ++  F               +     +      +S +  A +++    
Sbjct: 1319 QDVIAAGGRYDKMLMSFRKVLERTGMASKETKQYGAGISISLDKLVSAVTEACENVGGEN 1378

Query: 370  NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EMFLGSSKNFGNQLKYADRRN 428
                ++      +   +     +     + + + G++   + L         L+Y    +
Sbjct: 1379 KCGIDVAVCCEGSQGSEGRREKEMIDVLREIWSLGLKVTTLDLCI---MEEILEYCQENS 1435

Query: 429  CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
                            + +  L  G++ +  +   ++W   R  +  I I ++V  +++
Sbjct: 1436 I-------------NQIIL--LRNGEKGTLRL---QTWERDRFQERKINIHDIVDYLQR 1476


>gi|121602198|ref|YP_989086.1| prolyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|152112216|sp|A1USY3|SYP_BARBK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120614375|gb|ABM44976.1| prolyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 441

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 61/465 (13%), Positives = 124/465 (26%), Gaps = 62/465 (13%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G         ++ +++   IR   E  G   I  P ++ +D L +  
Sbjct: 26  MLRAGIIRQQT-SGIYSWLPLGKKVLDKVCTIIREEQERAGALEISMPTIQSAD-LWRES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-PVFR 116
              D     +  ++D   + +       ++   + R    ++  +       +       
Sbjct: 84  GRYDDYGLEMLRIKDRQERDLLYGPTNEEMVTDIFRSYVRSYKDLPLNLYQIQWKFRDEI 143

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
             + G  R R+F+  D  +     E+A      M    L               +   + 
Sbjct: 144 RPRFGVMRSREFLMKDGYSFDLDYESAKTSYNRMFIAYLRTFSRIGLKVIPMRADTGPIG 203

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ 236
           G L    +         +                 K  L       S DFT    LT   
Sbjct: 204 GELSHEFIILAKTGESAVFCD--------------KRFLEMTAPPVSVDFTDNVVLTDIV 249

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
                 + + +   +  E  ++ K      +G     +     + S     ++       
Sbjct: 250 KQWTALYATTEEMHNAEEWAQICKSNQLSARGIEVGHIFYFGTKYSEPMGAKVM------ 303

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
                               + K+ PV  GS G G       +     +           
Sbjct: 304 ------------------GRDGKEYPVFMGSYGIGPSRLVAAAIEASHDENGI------- 338

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                          I      +I T   ++      +   Q L  AG    +   + + 
Sbjct: 339 ----------IWPKPITPFDFGIINTKSDNAKCYGMCETLYQGLVNAGFDPLLDDRNER- 387

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            G +    D    P  II G    ++  ++IKD   G +    ++
Sbjct: 388 PGAKFATMDLIGLPTQIIVGPKSAAQDEVEIKDRKTGTKEVLTVE 432


>gi|254473538|ref|ZP_05086934.1| ATP phosphoribosyltransferase regulatory subunit [Pseudovibrio sp.
           JE062]
 gi|211957250|gb|EEA92454.1| ATP phosphoribosyltransferase regulatory subunit [Pseudovibrio sp.
           JE062]
          Length = 365

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 124/365 (33%), Gaps = 54/365 (14%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           +  ++ + G++    P+L+ +D       ++ R  + +F    +DGQ + LR D T P+A
Sbjct: 3   LSQLFRDAGYEEATPPILQPADIFLDLAGEDLR--RRLFLTTGEDGQELCLRPDFTIPIA 60

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA------- 145
           R+  E             +G VFR+     G   Q     +         AD        
Sbjct: 61  RHYLETG-EAGRTAAFSYVGQVFRHRPGQLGETMQAGVESIGRTDQEQADADMLALALEA 119

Query: 146 ----------------EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                            +   +   LE   + +         R  LD ++ ++G      
Sbjct: 120 SSSLGLSSPRIRVGDEGLFTSVLQALEIPKVWQRRLRDVFGERDRLDQVINRMGGSEAKP 179

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLG---------------EGRTDNSGDFTKGANLTS 234
             +   +     +  +  +  V+ +L                  R       + G+ +  
Sbjct: 180 DAKLGFLAALEGRDPEAAVAVVEDVLSLAGISAVGGRTAHEIAERFMEQAALSAGSGIDK 239

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGT----IAGEKGFNELVVISELVRKSGYNSNRIK 290
           + I  +  +L++        +  L        +  E     L   ++L+ + G + + ++
Sbjct: 240 DVIARLTEYLNVSGPPPAKAVETLHGFAKETGLDLEASIERLAKRTDLMAERGIDISALE 299

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PAT 349
            S    R L+YYT  V+E           +     G V GGGRY+ LV R    +  PA 
Sbjct: 300 YSGDFGRRLDYYTDFVFEI--------HHESSEHLGQVIGGGRYNKLVERLGAPSTVPAV 351

Query: 350 GFSIG 354
           GF+I 
Sbjct: 352 GFTIW 356


>gi|57651833|ref|YP_186139.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|81175020|sp|Q5HGG8|SYP_STAAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57286019|gb|AAW38113.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
          Length = 567

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 67/541 (12%), Positives = 143/541 (26%), Gaps = 80/541 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+ L  +   G         R+ N I   +R   E      I  P L+ ++ L +     
Sbjct: 28  KSGLIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-------- 112
                 +  LQD  G+  +L     +L   + R   +++  +       +          
Sbjct: 87  GAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPR 146

Query: 113 ---------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA----- 152
                              +E      ++   Q            A   +    A     
Sbjct: 147 FGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSH 206

Query: 153 -DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------RA 199
                A+     D  +          I +   ++  +  +  +  L              
Sbjct: 207 THEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQEL 266

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELYE 257
            D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+  
Sbjct: 267 ADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIVN 324

Query: 258 LVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           LV               +   +  V     +           I+  + R         + 
Sbjct: 325 LVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFR 384

Query: 309 AILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIGI 355
            IL    +++      F            G +Y   ++     N           + IGI
Sbjct: 385 FILEGEKLSDGSGAAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGI 444

Query: 356 SRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           SR + A+              ++      LI+      D                    +
Sbjct: 445 SRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV-L 502

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    +  G +   AD    PL I+ G    S G++++K+   G      I +  +    
Sbjct: 503 YDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561

Query: 470 R 470
           +
Sbjct: 562 K 562


>gi|254368866|ref|ZP_04984879.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121787|gb|EDO65957.1| prolyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 565

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/538 (10%), Positives = 144/538 (26%), Gaps = 78/538 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R+     G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IK 161
             R        F                     M     + L+ +G            I 
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYATYCNILDKIGLAYRPVKADTGAIG 203

Query: 162 RNDYHIGINNRKILDGILEK-----------IGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
            ++ H         + I+             +  +    L++R+     I+K+    ++ 
Sbjct: 204 GDNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKPDLSKRVNSQNTIEKIHTPNIKT 263

Query: 211 VKLLLGEGRTDNSGDFTK-----------------GANLTSEQIDIMVSFLSIDLEKSMH 253
           ++ L  E   D                           L   +I+ +   ++     +  
Sbjct: 264 IEKLCKEMSFDIKKTIKTMVIKDAGGNFFALVIRGDHELNETKINKLDQIIAPYTLATKE 323

Query: 254 ELYELVKGTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E++ +          +        +   +    +       +    +    R +  Y   
Sbjct: 324 EIFSIFNANPGSLGIYNCPISIIADYSAIAITDLVCGANEDDYHFTNVNWDRDVTNYQIA 383

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKG------QNVPATGFS 352
               ++   +  + +  +   +    G        Y   ++          + +    + 
Sbjct: 384 DIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCYG 443

Query: 353 IGISRLIVALKSL---ESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGI 405
            G+SR++ A       E+     + + P  +  +       +          Q L   GI
Sbjct: 444 FGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSAKVKEVADKLCQDLLGDGI 503

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +    ++  G     AD       ++ G     +G+++ K+    ++    I   
Sbjct: 504 DVLLDDRGAR-PGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAEL 560


>gi|303248073|ref|ZP_07334338.1| prolyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490472|gb|EFL50380.1| prolyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 575

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 54/164 (32%), Gaps = 12/164 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        ++  N +   +R   +  G   I  P ++ +D L K     +  
Sbjct: 31  MIRKLTAGIYTYLPLGLKALNNVARIVREEMDRAGALEILMPAVQPAD-LWKESGRWEFY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +    D   +   L     ++   L R+   ++  +      Y+I   FR+E     
Sbjct: 90  GRELLRFVDRHEREFCLGPTHEEVVTDLVRHEIRSYRQLP--INLYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAET------ADAEMCMMMADTLEAVGIK 161
              +  +  + +  S  +       +   M        E +G+K
Sbjct: 148 GLMRGREFVMKDAYSFDKDDAGADASYWAMYKAYIRIFERLGLK 191



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
             D+++ +K       L  AGI   +     +  G++ K AD    P+ +  G    +RG
Sbjct: 479 AKDAEASAKADELYDALTAAGIETLLDDREER-PGSKFKDADLMGFPIQLTLGGKGLARG 537

Query: 444 MLQIKDLAKGKELSREIK 461
           +++ KD   G++    + 
Sbjct: 538 IVETKDRRTGEKGELPLD 555


>gi|330685703|gb|EGG97342.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 523

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 66/482 (13%), Positives = 126/482 (26%), Gaps = 100/482 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     D   + +F  
Sbjct: 140 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDHYQEDMFPP 198

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
              D  + + LR             +         +YR  P+   E     R+       
Sbjct: 199 MKLDETEEMVLRPMNCP-------HHMMVYNNKPHSYRELPIRIAELGTMHRYEASGAVS 251

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                     G+  ND HI +   +I +     + +        
Sbjct: 252 G--------------------LQRVRGMTLNDSHIFVRPDQIKEEFKRVVNM-------- 283

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   D    FG +  +  L     +                         D EK  
Sbjct: 284 ------IQDVYKDFGFEDYRFRLSYRDPE-------------------------DKEKYF 312

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +EL +  E                      +  T    +    
Sbjct: 313 DDDEMWNKAENMIKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFL 372

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
            P   E       G                 + V      +      VA  + E+     
Sbjct: 373 LPERFELTYIGQDGE--------------HHRPVVIHRGVVSTMERFVAFLTEETKGAFP 418

Query: 373 KEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
             + P  +  +  + D    Y       L++ G+R E+    ++  G +++ A  +  P 
Sbjct: 419 TWLAPKQVEIIPVNLDLHYDYAKSIQDELKSQGVRVEID-DRNEKMGYKIREAQMQKIPY 477

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            I+ G  E     + ++      + + E K+   W              LV  ++  L++
Sbjct: 478 QIVVGDKEVENNEVNVRKYGSQDQETLE-KDEFIW-------------NLVDEIR--LKK 521

Query: 492 NK 493
           ++
Sbjct: 522 HR 523


>gi|303326973|ref|ZP_07357415.1| proline--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302862961|gb|EFL85893.1| proline--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 580

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 60/212 (28%), Gaps = 11/212 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        ++I ++I   +R      GF  +  P+++ +D L K     +  
Sbjct: 31  MVRRLTSGLYIYLPLGLKIIDKIARVVREEINASGFQELLMPMVQPAD-LWKETGRWEHY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +   +D + +   L         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRFKDRNERDYCLGPTHEEVITDLVRGEVRSYRQLPVRLYQIQSKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D   + AE +   M        + +G+K   +     +   + G  
Sbjct: 150 MRGREFMMKDGYSFDADIAGAEESYKLMYDAYTRIFKRLGLK---FRAVEADTGSIGGNF 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
               +   D   + +      D         V
Sbjct: 207 SHEFMVLADTGEDTIAFCHDCDYAANVERAEV 238



 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 1/107 (0%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +     +L+     +++  +K +    MLR  G+   +     +  G + K AD  
Sbjct: 466 FPPPVAPFECILLNLDPRNAEVTAKAEEIYAMLRDMGVDVLLDDREER-PGVKFKDADLL 524

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             P+ ++ G    +RG+++ KD   G++        E       A +
Sbjct: 525 GAPMQLVVGGKGLARGIVECKDRRSGEKGELSAGVIEEDFSQWAAGV 571


>gi|329733665|gb|EGG69993.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 567

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 67/541 (12%), Positives = 143/541 (26%), Gaps = 80/541 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+ L  +   G         R+ N I   +R   E      I  P L+ ++ L +     
Sbjct: 28  KSGLIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-------- 112
                 +  LQD  G+  +L     +L   + R   +++  +       +          
Sbjct: 87  GAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPR 146

Query: 113 ---------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA----- 152
                              +E      ++   Q            A   +    A     
Sbjct: 147 FGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSH 206

Query: 153 -DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------RA 199
                A+     D  +          I +   ++  +  +  +  L              
Sbjct: 207 THEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQEL 266

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELYE 257
            D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+  
Sbjct: 267 ADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIVN 324

Query: 258 LVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           LV               +   +  V     +           I+  + R         + 
Sbjct: 325 LVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFR 384

Query: 309 AILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIGI 355
            IL    +++      F            G +Y   ++     N           + IGI
Sbjct: 385 FILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGI 444

Query: 356 SRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           SR + A+              ++      LI+      D                    +
Sbjct: 445 SRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV-L 502

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    +  G +   AD    PL I+ G    S G++++K+   G      I +  +    
Sbjct: 503 YDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561

Query: 470 R 470
           +
Sbjct: 562 K 562


>gi|145590982|ref|YP_001152984.1| threonyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166225486|sp|A4WIW5|SYT_PYRAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145282750|gb|ABP50332.1| aminoacyl-transfer RNA synthetase, class II [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 608

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 50/163 (30%), Gaps = 2/163 (1%)

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           I  F +     +      V    +    V            +   +   +  ++    + 
Sbjct: 428 IATFQIDVGNAQRFGIKYVDENNQVRYPVIIHTAILGSVERYLYAVFDTMAKMEKEGKTP 487

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + PV    +    ++L        +L   GIR ++     +    +++ A+    
Sbjct: 488 RLPTWLSPVQTRVIPVSKENLKYAMAVADLLEAEGIRVDVD-DREETLSKKIRDAETAWV 546

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P  I+ G+ E + G + +++   G +   + +         V 
Sbjct: 547 PYIIVVGSKEEAEGTVTVRE-RGGGQYKAKAEELAKKIREEVK 588


>gi|87161679|ref|YP_493853.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194973|ref|YP_499773.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221385|ref|YP_001332207.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509429|ref|YP_001575088.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142497|ref|ZP_03566990.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|262048155|ref|ZP_06021042.1| prolyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051325|ref|ZP_06023548.1| prolyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|282920507|ref|ZP_06328228.1| prolyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|284024256|ref|ZP_06378654.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294848259|ref|ZP_06789006.1| prolyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|304381173|ref|ZP_07363826.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|114152254|sp|Q2FHH5|SYP_STAA3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152255|sp|Q2G1Z4|SYP_STAA8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|172049021|sp|A6QGG3|SYP_STAAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083518|sp|A8Z3U3|SYP_STAAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|87127653|gb|ABD22167.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202531|gb|ABD30341.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150374185|dbj|BAF67445.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368238|gb|ABX29209.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|259160700|gb|EEW45721.1| prolyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259163721|gb|EEW48276.1| prolyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|282594169|gb|EFB99156.1| prolyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|294825059|gb|EFG41481.1| prolyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|302751086|gb|ADL65263.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340156|gb|EFM06097.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|315198505|gb|EFU28834.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140920|gb|EFW32767.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144364|gb|EFW36130.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313933|gb|AEB88346.1| Prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329727831|gb|EGG64282.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 567

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 67/541 (12%), Positives = 143/541 (26%), Gaps = 80/541 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+ L  +   G         R+ N I   +R   E      I  P L+ ++ L +     
Sbjct: 28  KSGLIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-------- 112
                 +  LQD  G+  +L     +L   + R   +++  +       +          
Sbjct: 87  GAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPR 146

Query: 113 ---------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA----- 152
                              +E      ++   Q            A   +    A     
Sbjct: 147 FGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSH 206

Query: 153 -DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------RA 199
                A+     D  +          I +   ++  +  +  +  L              
Sbjct: 207 THEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQEL 266

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELYE 257
            D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+  
Sbjct: 267 ADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIVN 324

Query: 258 LVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           LV               +   +  V     +           I+  + R         + 
Sbjct: 325 LVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFR 384

Query: 309 AILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIGI 355
            IL    +++      F            G +Y   ++     N           + IGI
Sbjct: 385 FILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGI 444

Query: 356 SRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           SR + A+              ++      LI+      D                    +
Sbjct: 445 SRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV-L 502

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    +  G +   AD    PL I+ G    S G++++K+   G      I +  +    
Sbjct: 503 YDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561

Query: 470 R 470
           +
Sbjct: 562 K 562


>gi|134118463|ref|XP_772118.1| hypothetical protein CNBM1630 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50254725|gb|EAL17471.1| hypothetical protein CNBM1630 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1565

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/475 (12%), Positives = 137/475 (28%), Gaps = 41/475 (8%)

Query: 29   ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
            ++  + ++++ +G      PLL    +L    P+ D        L +  GQ + L     
Sbjct: 952  VIQRLVDLFQRHGAVETYLPLLIPETTLLDAFPNLDPV-----RLIEKSGQVVQLPSSDV 1006

Query: 89   APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
              + R         +      R     +                     ++AE    E+ 
Sbjct: 1007 LAMGRSATRRQIERIKRYHVGRKYTEHQLGGQPVISGLLSFDIVSPIRSAAAEAECLEVV 1066

Query: 149  MMMADTLEAV-GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR-AIDKLDKF 206
              +      + G    +Y   +++  +LD IL+ I    D    + L   R         
Sbjct: 1067 DKVISEFRGMRGTSSVEYEFHVSHETVLDAILDIIPDRPDKPRLKVLEQFRNLGASNSAN 1126

Query: 207  GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
                 + LL                L+   +D +         + + +  E +  + + +
Sbjct: 1127 PSAQSRNLLSNVT-----------GLSRILMDELEQCCIAGDFEVVRKRLESIFTSTSAK 1175

Query: 267  K----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            +      +++  +    R  G     +   +       +  G ++E +      +     
Sbjct: 1176 RKLDTALDDMANVINSARACGVARKILFRPTLAKHSEFFRGGFMFECVRKGKQKDVVAYG 1235

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA-----------LKSL---ESS 368
              + S+     +   V   + + V   G SI + +L              L      +  
Sbjct: 1236 GRYDSLL--EHFKQPVMHSQSRRVFGVGMSIAVDQLARIVSRYESSLSRRLMEKPNEDER 1293

Query: 369  TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +          +         L+        L  AGIRA+      ++     +    +N
Sbjct: 1294 SFGYWSPARCDVYVASFPQVDLAHRLQIIGELWRAGIRADFQYDDGRSLEEVTQECQDQN 1353

Query: 429  CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
                +I      SR  ++I+ + +  E+               A+ +IP ++  +
Sbjct: 1354 ILYLVIPK---ASRSTIKIRSILRRSEVEVISDQRRIDASYASAEGSIPSAQAAA 1405


>gi|329120957|ref|ZP_08249588.1| proline--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471119|gb|EGF16573.1| proline--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 574

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 70/543 (12%), Positives = 147/543 (27%), Gaps = 78/543 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +  ++  GF        R   +I + I           I   + + ++   +  
Sbjct: 26  MLKAG-MIRKISSGFYSYLPLAWRSIKKIENIIHEEMAKIESQEILMSIAQPAEIWQQ-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D   + +F L+D   +   L     +L   L     + F     P   Y+I   +R+
Sbjct: 84  GRWDVYGEEMFRLKDRHERDYCLAPTHEELVTTLV--HIDTFSYKQLPVSLYQIQNKYRD 141

Query: 118 EK------HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG--- 168
           EK           F        D      +    +M     +     G+           
Sbjct: 142 EKRPRFGLMRSREFIMKDAYTFDVDEEGLDKQYHDMYDAYTNIFTKCGLNFRTVIADSGA 201

Query: 169 -----INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR-TDN 222
                 +  ++L    E   ++  D      +     D +       ++  +      + 
Sbjct: 202 IGGSSSHEFEVLAEAGEADIVYEVDGEFAANVEAVIPDTISCNLKNDLEKEIVATPGQET 261

Query: 223 SGDFTKGANLTS------------------------EQIDIMVSFLSIDLEKSMHELYEL 258
             D  K   L                          E  ++ +  +   +  SM    +L
Sbjct: 262 IEDVCKFLGLPVTQSIKAVIYKLDDKIVLALVRGDHEVNEVRLQNIYNAINVSMATEKDL 321

Query: 259 VKG-------TIAGEKGFNELVVISEL----VRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            K        +  G K   +  +I +     ++ +   +N        V     +     
Sbjct: 322 KKAGLVAGYISPIGLKKNKDFDIIVDKTVMEMKDACCGANIKDKHYIHVNPKRDFDSVRI 381

Query: 308 EAILGFPVMNEKQKPVVFGSVGGG--------------GRYDGLVSRFKGQNVPATGFSI 353
           E I      +             G                 +       G++ P      
Sbjct: 382 ETIRLIDKNDVSPWTGKEIEFKKGIEVGQVFKLGTKYSESLNCTYLDKNGKSKPMVMGCY 441

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLI----TTMDHDSDSLSKYQMYTQML-RTAGI--R 406
           GI        S+E + +    +  V I      +   ++  S+     + L R       
Sbjct: 442 GIGVTRTMAASIEQNHDKDGIIWAVSIAPYEVVIIPANNKNSEIMKVAEELYRNMSKENN 501

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +F   ++  G + K AD    P+ +  G      G ++IK    G+ +  + K+ ++ 
Sbjct: 502 EIVFDDRNERAGIKFKDADLIGYPIRVTIGKKWEENGKVEIKIRRTGEVIEIDYKDCKAK 561

Query: 467 REA 469
            E+
Sbjct: 562 VES 564


>gi|302339715|ref|YP_003804921.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636900|gb|ADK82327.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 585

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/442 (13%), Positives = 125/442 (28%), Gaps = 93/442 (21%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K  RIR++I    ++ +   G++ + TP +     L +     D   +G++      
Sbjct: 212 WHPKGARIRHQIETFWKDEHFKNGYELLYTPHV-GKSWLWETSGHLDFYAEGMY------ 264

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                   ++    A Y A       F    Y+       E                   
Sbjct: 265 -------PEMVMDKANYYA-KPMNCPFHIMIYKTNKHSYRELPFR-------------WA 303

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                   E    +   +   G  ++D HI     ++ D ILE +             +L
Sbjct: 304 ELGTVYRYEKSGTLHGLMRVRGFTQDDAHIFCTPEQVEDEILEVLRFSL--------HML 355

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           RA                                        + ++LS   EK++ +  +
Sbjct: 356 RAFGF-----------------------------------SDIQAYLSTRPEKAVGDPEQ 380

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
                 + +K      +  E+             +K+   + R  +  T       + F 
Sbjct: 381 WKLAEASLQKAIEAEGLAYEVDEGGGAFYGPKIDLKVKDALGRSWQLST-------VQFD 433

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
               K+  + F         D      +   V             V ++    +      
Sbjct: 434 FNEPKRFGMTFV--------DHDGKEKQPYMVHRALLGSIERFFGVLIEHYGGAFPVWLS 485

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V +  +    ++ +K       LR   +RA++ L  S+    +++ A +   P  +I
Sbjct: 486 PVQVQVIPVAPAFEAYAKSVE--TELRRHDLRADVDLSDSR-MNAKIRNAQKEKIPYMLI 542

Query: 435 QGTGERSRGMLQIKDLAKGKEL 456
            G  E+    + ++    G+++
Sbjct: 543 LGEKEQESRSVSVRK-RNGEQV 563


>gi|15924253|ref|NP_371787.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926846|ref|NP_374379.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21282875|ref|NP_645963.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|148267753|ref|YP_001246696.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393812|ref|YP_001316487.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156979584|ref|YP_001441843.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253315619|ref|ZP_04838832.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253733499|ref|ZP_04867664.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|255006050|ref|ZP_05144651.2| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795681|ref|ZP_05644660.1| prolyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258416084|ref|ZP_05682352.1| prolyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258421667|ref|ZP_05684591.1| prolyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258434823|ref|ZP_05688897.1| prolyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444601|ref|ZP_05692930.1| prolyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258447566|ref|ZP_05695710.1| prolyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449408|ref|ZP_05697511.1| prolyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454787|ref|ZP_05702751.1| prolyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269202880|ref|YP_003282149.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282892751|ref|ZP_06300986.1| prolyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|295406200|ref|ZP_06816007.1| prolyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296274821|ref|ZP_06857328.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297208091|ref|ZP_06924522.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297244428|ref|ZP_06928311.1| prolyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300912172|ref|ZP_07129615.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|81175021|sp|Q99UK9|SYP_STAAM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81175022|sp|Q7A5Y3|SYP_STAAN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81175025|sp|Q7A120|SYP_STAAW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980161|sp|A7X1P3|SYP_STAA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083516|sp|A6U182|SYP_STAA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083517|sp|A5ISE7|SYP_STAA9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|13701063|dbj|BAB42358.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus N315]
 gi|14247033|dbj|BAB57425.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204314|dbj|BAB95011.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus MW2]
 gi|147740822|gb|ABQ49120.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946264|gb|ABR52200.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156721719|dbj|BAF78136.1| proline-tRNA ligase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253728553|gb|EES97282.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257789653|gb|EEV27993.1| prolyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839232|gb|EEV63708.1| prolyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257842353|gb|EEV66778.1| prolyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257849184|gb|EEV73166.1| prolyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850094|gb|EEV74047.1| prolyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257853757|gb|EEV76716.1| prolyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257857396|gb|EEV80294.1| prolyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257863170|gb|EEV85934.1| prolyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262075170|gb|ACY11143.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282764748|gb|EFC04873.1| prolyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285816945|gb|ADC37432.1| Prolyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294968788|gb|EFG44810.1| prolyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296887334|gb|EFH26236.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178458|gb|EFH37704.1| prolyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300886418|gb|EFK81620.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|312829657|emb|CBX34499.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315131057|gb|EFT87041.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329727670|gb|EGG64126.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 567

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 67/541 (12%), Positives = 143/541 (26%), Gaps = 80/541 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+ L  +   G         R+ N I   +R   E      I  P L+ ++ L +     
Sbjct: 28  KSGLIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-------- 112
                 +  LQD  G+  +L     +L   + R   +++  +       +          
Sbjct: 87  GAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPR 146

Query: 113 ---------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA----- 152
                              +E      ++   Q            A   +    A     
Sbjct: 147 FGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSH 206

Query: 153 -DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------RA 199
                A+     D  +          I +   ++  +  +  +  L              
Sbjct: 207 THEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHSTVQPLEKIETPNVKTAQEL 266

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELYE 257
            D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+  
Sbjct: 267 ADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIVN 324

Query: 258 LVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           LV               +   +  V     +           I+  + R         + 
Sbjct: 325 LVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFR 384

Query: 309 AILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIGI 355
            IL    +++      F            G +Y   ++     N           + IGI
Sbjct: 385 FILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGI 444

Query: 356 SRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           SR + A+              ++      LI+      D                    +
Sbjct: 445 SRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV-L 502

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    +  G +   AD    PL I+ G    S G++++K+   G      I +  +    
Sbjct: 503 YDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561

Query: 470 R 470
           +
Sbjct: 562 K 562


>gi|256396855|ref|YP_003118419.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363081|gb|ACU76578.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 582

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 37/132 (28%), Gaps = 2/132 (1%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           DG   R    +                   L            V I     D        
Sbjct: 444 DGKPVRVTMGSYGVGVSRAVAVLAEQLHDELGLVWPREVAPADVHIVAAGKDPAIYETAN 503

Query: 395 MYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
            Y + L   G+R          + G + K A+    P  ++ G    + G+++++D   G
Sbjct: 504 RYAEELGARGVRVLYDDRVGSVSPGVKFKDAELIGVPTIVVVGRN-LADGVVEVRDRQTG 562

Query: 454 KELSREIKNNES 465
           ++    + +   
Sbjct: 563 EKAEVAVPDLVE 574



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G         ++   +   +R   +  G   ++ P L   EY ++ G++    D     +
Sbjct: 40  GIYSWLPLGKQVLENVTRVVREEMDRMGGQEVQFPALLPREYYEATGRWTEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G    L  
Sbjct: 96  FRLQDRRGNDYLLGP 110


>gi|242373554|ref|ZP_04819128.1| prolyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348917|gb|EES40519.1| prolyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 567

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 68/541 (12%), Positives = 152/541 (28%), Gaps = 81/541 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E+     I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNISKIVREEMESIDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  L+D +G+  +L     ++   L R   +++  +       +         
Sbjct: 86  WGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRDELKSYKRLPLTLFQIQSKFRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E      ++                A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDATYQDMYNAYSRIFKRVGINARPVVADSGAIGGN 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR------------ 198
                 A+     D  +  N  +    I +   ++   K +     L             
Sbjct: 206 HTHEFMALSEIGEDTIVYSNESEYAANIEKAEVVYHPSKKHTETAELTKIETPHVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELY 256
             D L++   + VK ++ +   +      +G +  ++    + SF   D  +     E+ 
Sbjct: 266 LADFLNRPLDEIVKTMIFKVDGEFIMVLIRGHHELNDV--KLKSFFGTDHVEMATQDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           +++ + R  E      +
Sbjct: 324 NLVGANPGSLGPIHNKEIKIYADNYVQDLNNLVVGANEDGYHYVNANVGRDFEIDQYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVPAT------GFSIG 354
             IL   ++++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEMLSDGSGEAQFAEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+    +         ++      LIT      +           L   G    
Sbjct: 444 ISRTLSAIVEQNNDENGIIWPKSVTPFELHLITINPKKDEQRELGNQLYSQL--NGRYDV 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    PL ++ G      G++++K    G+     I + E++ +
Sbjct: 502 LYDDRQERAGVKFNDADLIGLPLRVVVGKR-AGEGIVEVKQRLNGESEDVHIDDLENYLK 560

Query: 469 A 469
           +
Sbjct: 561 S 561


>gi|313680219|ref|YP_004057958.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus
           profundus DSM 14977]
 gi|313152934|gb|ADR36785.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus
           profundus DSM 14977]
          Length = 649

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 1/98 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     L  AG+R E+     +    +++ A+ +  P+ +
Sbjct: 547 WLAPVQVVVVPITDRHHDYARKVRAELEAAGLRVEVDDRPER-MNAKIRDAETQKVPVIL 605

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           + G  E   G + ++D   G+  +R +         RV
Sbjct: 606 VVGDKETEEGTVAVRDRRTGERTTRALSEVVRDLAERV 643



 Score = 41.0 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 1/113 (0%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R  ++  +R+     G+  + TP +   +                  
Sbjct: 267 KGLVLWLPKGNVLREELVAFMRDEQIKRGYQLVTTPHIGSLELYKTSGHYPYYAESQFPP 326

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
           ++ +DG+   L+        R  A    +    P R    G V+R E+ G   
Sbjct: 327 MELEDGEAYLLKPMNCPHHVRIYAMRPRSYRELPLRLAEFGTVYRFEQSGELH 379


>gi|206895814|ref|YP_002247094.1| prolyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|226699133|sp|B5Y8J7|SYP_COPPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|206738431|gb|ACI17509.1| prolyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 558

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 56/524 (10%), Positives = 141/524 (26%), Gaps = 74/524 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G         ++  +I   +R   +  G   +   ++  ++ + K     +  
Sbjct: 31  MIKQIASGVYAFLPFGHKVLKKIETVVREEMDRIGGQEMTMSIMMPAE-MWKKTGRWELY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEK 119
              +   +D   Q   L     +    LA  +  ++  +       +      P  R   
Sbjct: 90  GDDMIKFKDRKEQDFCLGPTHEEQITTLAGQLISSYKQLPQLVYQIQTKFRDEPRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F         +   S +T   ++       LE +G+   +Y +   +   + G L
Sbjct: 150 IRLREFVMKDAYSFHDSEESLKTTYDQVLNAYKRILERIGL---NYEVVAADPGQIGGTL 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDK----------------LDKFGLQGVKLLLGEGRTDNS 223
               +   +     +    +                   L+K  L+ V         D +
Sbjct: 207 SHEFIVPAEVGESTVFKCDSCGYVATSEVATSVLPAPAFLEKPALEKVHTPDTSSIEDVA 266

Query: 224 GDFTKGANLTSEQIDIMVS----FLSIDLEKSMHELYE-------------------LVK 260
                      + + ++       + +  ++ + E                       + 
Sbjct: 267 EFLQLSKERIIKAVMVIGDSRPYMILVRGDRELDESKMNRRFTQWRMMTDEEILSMGFIP 326

Query: 261 GTIAGEKGFNELVVISEL-VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
           G +   +G NE+ ++ +  +    +           + G+E      +E +    V    
Sbjct: 327 GFVGPREGINEITILKDKSLESLDWGVIGANERDYHIVGVEVSELPFHEIVDLAEVAEGD 386

Query: 320 QKPVVFGSVGG------------GGRYDGLVSRFKGQN--------VPATGFSIGISRLI 359
             P     +              G RY   +  F            +   G  +      
Sbjct: 387 LCPQCGSPLRSFTGLEVGHIFRLGTRYSEPLEAFYHSEDGERKPFIMGCYGIGVTRLVSA 446

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           V  +  +                +    D  ++ Q     L +AG+   +     +  G 
Sbjct: 447 VIEQHHDDFGIVWPWSVAPYHVVIIPIGDVEAQVQELENTLSSAGLDVFVDDRDER-PGV 505

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +   AD    P+ ++     +  G ++IK    G+ L    ++ 
Sbjct: 506 KFVDADLIGFPVRLVV--NAKKEGKVEIKFRKTGETLLVGQEDV 547


>gi|238924616|ref|YP_002938132.1| threonyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238876291|gb|ACR75998.1| threonyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 676

 Score = 68.7 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/477 (10%), Positives = 119/477 (24%), Gaps = 93/477 (19%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           P+G        ++++  I D + +  + +G+   +TPL+  SD   K     D    G+F
Sbjct: 285 PKGTKMI----MKLQRWIED-LED--KEWGYVRTKTPLMAKSDLY-KISGHWDHYLDGMF 336

Query: 72  SL----QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            L    +D + + ++LR  +T P                                     
Sbjct: 337 VLGDPEKDGEEEVMALRP-MTCPF--------------QYYVYKAKQHSYR--DLPYRMG 379

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
                  N  S        +          V                 +  L+       
Sbjct: 380 ETSTLFRNEDSGEMHGLTRVRQFTISEGHNV-----------IRPDQCEEELKACFNLNR 428

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
             L    +      +L K+  +  +  LG+    NS        L  E +     F+  D
Sbjct: 429 YVLKVLGLENDVTYRLSKWDPKNTEKYLGDDEYWNSTQEVLRNILIEENVP----FVEAD 484

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            E + +     ++      K    + +  +      ++   I  +   +R    +     
Sbjct: 485 GEAAFYGPKIDIQAKNVYGKEDTMVTIQLDCAIAENFDLYYIDQNGDKIRPYIIH-RTSL 543

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                      +     F +     +                                  
Sbjct: 544 GCYERTLAWLIEHYAGKFPTWLCPEQ---------------------------------- 569

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                       +  +          +     L+   +   +    ++  G +++ A   
Sbjct: 570 ------------VRVLPISEKYADYAKKVADELKRNDVDVTVD-NRAEKIGYKIREARMD 616

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
             P  ++ G  E + G + ++   +G E  + + +        +    I   EL   
Sbjct: 617 KLPYMLVVGADEEADGTVSVRSRFEGNEGVKPLSDFIDQICKEIRTKEI-RVELPEE 672


>gi|197301753|ref|ZP_03166823.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC
           29176]
 gi|197299193|gb|EDY33723.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC
           29176]
          Length = 655

 Score = 68.3 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 60/480 (12%), Positives = 120/480 (25%), Gaps = 91/480 (18%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            P+G        ++++  I D + +  + +G+    TPL+  SD   K     D   +G+
Sbjct: 265 PPKGTKMI----MKLQRWIED-LED--KEWGYVRTRTPLMAKSDLY-KISGHWDHYKEGM 316

Query: 71  FSLQD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           F L D   D +  +LR  +T P   YV +N                        G     
Sbjct: 317 FVLGDEEKDKEVFALRP-MTCPFQYYVYKNTQKSYRDLPYRMSETSTLFRSEDSGE---- 371

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
                                     L  V          +      +  L+       D
Sbjct: 372 -----------------------MHGLTRVRQFTITEAHNVIRPDQAEEELKNCF----D 404

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                L  L   D +     +       +   D          L     +  V F+  D 
Sbjct: 405 LAYYVLSTLGLQDDVTYRLSKWDPANKKKYLGDEDYWNRTQEALREVLREKGVPFVEADG 464

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           E + +     ++      K    + +  +      ++   I  +   VR    +      
Sbjct: 465 EAAFYGPKIDIQAKNVYGKEDTMITIQLDCAIAENFDLYYIDQNGDKVRPYIIH-RTSMG 523

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                     ++    F +     +                                   
Sbjct: 524 CYERTLAWLIEKYAGKFPTWLCPEQ----------------------------------- 548

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                    V +  +    +  +        L+   I   +    S+  G +++ A    
Sbjct: 549 ---------VRVLPISEKYEEYAN--KVCAELKKNDIDVTVD-NRSEKIGFKIREARLDK 596

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            P  ++ G  E + G + ++    G E ++ +          +    I   EL    KK 
Sbjct: 597 LPYMLVVGQQEEADGTVSVRSRFAGNEGTKSLDEFIDAICKEIRTKEI-RKELPEEEKKR 655


>gi|283470478|emb|CAQ49689.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 567

 Score = 68.3 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 66/542 (12%), Positives = 142/542 (26%), Gaps = 81/542 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E      I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  LQD  G+  +L     +L   + R   +++  +       +         
Sbjct: 86  WGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E      ++   Q            A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGS 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------R 198
                 A+     D  +          I +   ++  +  +  +  L             
Sbjct: 206 HTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELY 256
             D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+ 
Sbjct: 266 LADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           I+  + R         +
Sbjct: 324 NLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIG 354
             IL    +++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+              ++      LI+      D                    
Sbjct: 444 ISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV- 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    PL I+ G    S G++++K+   G      I +  +   
Sbjct: 502 LYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVIT 560

Query: 469 AR 470
            +
Sbjct: 561 NK 562


>gi|167646774|ref|YP_001684437.1| prolyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083491|sp|B0SZ28|SYP_CAUSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167349204|gb|ABZ71939.1| prolyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 445

 Score = 68.3 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/476 (10%), Positives = 117/476 (24%), Gaps = 71/476 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  ++   +R   +  G   +  P ++ +D L +     D  
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLKKVERIVREEMDRAGAIELLMPTIQLAD-LWRESGRYD-- 87

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                   D   + +           R    +                            
Sbjct: 88  --------DYGDEML-----------RITDRHKRD------LLYGP-------------- 108

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL--EKIGL 184
                  + V +    A  +    +   L  +  K  D              L  +    
Sbjct: 109 -----TAEEVVTDIFRASVKSYKDLPKNLYNIQWKFRDERRPRFGVMRGREFLMKDAYSF 163

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQ-----GVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             D +   +      +  L+ F         ++   G    D S +F   A      +  
Sbjct: 164 DLDAEGARKAYNRMFVAYLNLFSRMGLKAVPMRADTGPIGGDLSHEFIVLAETGESAVFC 223

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
               + +       + Y  ++  +        L   +E +      +   +      RG+
Sbjct: 224 HKDLVEMAAPGPDIDWYGDLQPLVNERTA---LYAATEEMHDEAAFAALPEGDRLSARGI 280

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           E      +      P+      P            DG     +  +       +  + + 
Sbjct: 281 EVGHIFSFGTKYSEPMKALVTGP------------DGKDVPVQMGSYGVGVSRLLGAIIE 328

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT-QMLRTAGIRAEMFLGSSKNFG 418
            +                V +  M     +  +      + L+ AG         ++  G
Sbjct: 329 ASHDEGGIIWPESVAPFDVGVINMRQGDAACDEACETAYKALQAAGRDVLYDDNDTRG-G 387

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +    D    P  +I G    + G++++K+   G+  S  +    +   A+    
Sbjct: 388 AKFATMDLIGVPWQLIVGPKGIAEGVVELKNRKTGERHSAPLAEVIAQLSAQNPGK 443


>gi|323441042|gb|EGA98749.1| prolyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323443911|gb|EGB01522.1| prolyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 567

 Score = 68.3 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 66/542 (12%), Positives = 143/542 (26%), Gaps = 81/542 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E      I  P L+ ++ L +    
Sbjct: 28  KSGLIKQST-SGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  LQD  G+  +L     +L   + R   +++  +       +         
Sbjct: 86  WGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E+     ++   Q            A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEESLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGS 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------R 198
                 A+     D  +          I +   ++  +  +  +  L             
Sbjct: 206 HTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQSLEKIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELY 256
             D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+ 
Sbjct: 266 LADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           I+  + R         +
Sbjct: 324 NLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVPAT------GFSIG 354
             IL    +++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+              ++      LI+      D                    
Sbjct: 444 ISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV- 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    PL I+ G    S G++++K+   G      I +  +   
Sbjct: 502 LYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVIT 560

Query: 469 AR 470
            +
Sbjct: 561 NK 562


>gi|330719257|ref|ZP_08313857.1| threonyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 654

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/464 (11%), Positives = 118/464 (25%), Gaps = 81/464 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G          IR ++   I +   +  +  + TP+L   +   K     +   + +F 
Sbjct: 265 SGLPVWLPNGATIRRQVERYIVDKELSNDYLHVYTPILSNLNLY-KTSGHWEHYREDMFP 323

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+++ LR                             +++++          I  
Sbjct: 324 PMDMGDGEFLELRPMNCPS--------------------HIMIYKHKPRSYRELPMRIAE 363

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A   +  +   TL           +    + IL  ++E   ++ D  + 
Sbjct: 364 LGMMHRYEKSGALTGLSRVREMTLNDGHTFVEPEKLEEEFKSILKMMME---VYEDFNIT 420

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D+         L +   D+ + +   + E +
Sbjct: 421 DYRFRLSYRDPKNT----------AKYFDDDEMWEKSQKQLKTAMDDLGLDYFEAEGEAA 470

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                                                          L+  T        
Sbjct: 471 F------------------------------------------YGPKLDVQTKTALGGEE 488

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               +           +   G       R    +    G           ++  + +   
Sbjct: 489 TLSTIQLDFLLPERFDLSYIGEDGKDNHRPVMLHRGIVGTM--ERFTAYLIEMYKGAFPT 546

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  ++  +      +   Q L+ AG+RA +    +K  G  ++ A  +  P 
Sbjct: 547 WLSPLQVQIIPVNLGAHG-DYARRIQQQLQVAGLRANVETKDAK-MGYLIREAQTKKVPY 604

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            ++ G  E +   + ++     K  +  I   E    A VA+ +
Sbjct: 605 TLVLGDNEVADETVTVRQYGSEKTETISIAAFEKLILADVARYS 648


>gi|282927605|ref|ZP_06335221.1| prolyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282590608|gb|EFB95685.1| prolyl-tRNA synthetase [Staphylococcus aureus A10102]
          Length = 567

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 66/542 (12%), Positives = 142/542 (26%), Gaps = 81/542 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E      I  P L+ ++ L +    
Sbjct: 28  KSGLIKQST-SGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  LQD  G+  +L     +L   + R   +++  +       +         
Sbjct: 86  WGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E      ++   Q            A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGS 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------R 198
                 A+     D  +          I +   ++  +  +  +  L             
Sbjct: 206 HTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHSTVQPLEKIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELY 256
             D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+ 
Sbjct: 266 LADFLGRPVDEIVKTMIFKVDDEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           I+  + R         +
Sbjct: 324 NLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVPAT------GFSIG 354
             IL    +++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+              ++      LI+      D                    
Sbjct: 444 ISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV- 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    PL I+ G    S G++++K+   G      I +  +   
Sbjct: 502 LYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVIT 560

Query: 469 AR 470
            +
Sbjct: 561 NK 562


>gi|298694555|gb|ADI97777.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 567

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 67/541 (12%), Positives = 143/541 (26%), Gaps = 80/541 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+ L  +   G         R+ N I   +R   E      I  P L+ ++ L +     
Sbjct: 28  KSGLIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-------- 112
                 +  LQD  G+  +L     +L   + R   +++  +       +          
Sbjct: 87  GAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPR 146

Query: 113 ---------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA----- 152
                              +E      ++   Q            A   +    A     
Sbjct: 147 FGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSH 206

Query: 153 -DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------RA 199
                A+     D  +          I +   ++  +  +  +  L              
Sbjct: 207 THEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQSLEKIETPNVKTAQEL 266

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELYE 257
            D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+  
Sbjct: 267 ADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIVN 324

Query: 258 LVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           LV               +   +  V     +           I+  + R         + 
Sbjct: 325 LVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFR 384

Query: 309 AILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIGI 355
            IL    +++      F            G +Y   ++     N           + IGI
Sbjct: 385 FILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGI 444

Query: 356 SRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           SR + A+              ++      LI+      D                    +
Sbjct: 445 SRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV-L 502

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    +  G +   AD    PL I+ G    S G++++K+   G      I +  +    
Sbjct: 503 YDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561

Query: 470 R 470
           +
Sbjct: 562 K 562


>gi|289579170|ref|YP_003477797.1| prolyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528883|gb|ADD03235.1| prolyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 570

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R +L  G         R+  ++   +R   +  G   +    L  ++ L K  
Sbjct: 26  MLKAALMR-KLASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELL-KES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +F L+D + +   L  
Sbjct: 84  GRWDVFGPEMFKLKDRNERDFCLGP 108



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 26/149 (17%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGI+R + A+              ++     +++     +       +     L+  
Sbjct: 441 CYGIGINRTVAAIIEQNHDDKGIIWPMSVAPYHVIIVPVNVSNEAQNGVAEDIYAALQKE 500

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           GI   +     +  G +   AD    P+ I  G      G+++IK L + +E        
Sbjct: 501 GIEVLIDDRDLRA-GVKFNDADLLGIPIRITVGKK-VGDGIVEIK-LRENEEAE------ 551

Query: 464 ESWREARVAQITIPISELVSTVKKILQEN 492
                       + IS++V  VK I++E 
Sbjct: 552 -----------EVKISDVVEKVKNIIKEK 569


>gi|163795649|ref|ZP_02189615.1| Prolyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159179248|gb|EDP63781.1| Prolyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 437

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 55/448 (12%), Positives = 118/448 (26%), Gaps = 58/448 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  +I   +R   +  G+  +  P ++ +D L +     D  
Sbjct: 31  MIQQASAGIYSWLPLGLRVLKKIEQVVREEQDAAGWQEVLMPTIQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  ++D   +                                      +        
Sbjct: 90  GKEMLRIKDRHDR--------------------------------------DMLFGPTNE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + I         S +     +  +     + V  +           K             
Sbjct: 112 EVITDIFRTHVRSYKALPGRLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDFEAAK 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                + +  L+  D+L    +  +    G    D S +F   A+    ++     +L+ 
Sbjct: 172 RAYNRQFVAYLKTFDRLGLKAI-PMAADSGPIGGDLSHEFIILADTGESEVFCHKDWLTS 230

Query: 247 DL-EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +    ++    +L     A    +       +        ++ ++     V  + Y+ G 
Sbjct: 231 EAVPATVDYDADLQPIVDACLARYAATDEKHDPATCPVAEADLVRTRGIEVGHIFYF-GT 289

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            Y   LG  V     K V       G     LV      +    G               
Sbjct: 290 KYSDPLGAKVAGPDGKDVTVHMGSYGVGVSRLVGGIIEASHDDAGIV------------- 336

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +      L+     D+   S  +     L  AGI   M     +  G +L   D
Sbjct: 337 --WPEPVAPFKVGLVNLKVGDAACDSATEGLYGKLLKAGIEVLMDDRDER-PGAKLAGMD 393

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKG 453
               P  ++ G    + G++++K+   G
Sbjct: 394 LIGLPWQVVVGPRGLANGIVEMKNRKTG 421


>gi|120554655|ref|YP_959006.1| prolyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|152112927|sp|A1U1F0|SYP_MARAV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120324504|gb|ABM18819.1| prolyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 577

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 53/540 (9%), Positives = 129/540 (23%), Gaps = 81/540 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R   ++   +R   +  G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLAAGLYTWLPLGLRTLRKVERIVREEMDKSGAQEVLMPAVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG----------- 112
              +  L D  G+         ++   L R   +++  +       +             
Sbjct: 90  GGELLRLNDRHGRDFCFGPTHEEVITDLIRNELKSYKELPANFYQIQTKFRDERRPRFGV 149

Query: 113 ------------PVFRNEKHGPGRFRQFIQCDVDNV------GSSAETADAEMCMMMADT 154
                           N +     ++   Q   +            +     +    +  
Sbjct: 150 MRAREFIMKDAYSFHLNAESLDETYKVMHQTYCNIFDRLGLDYRPVQADSGSIGGSSSHE 209

Query: 155 LEAVGIKRNDYHIGINNRKILDGILEK--------IGLHGDDKLNERLIVLRAID----K 202
              +     D  +   +      I +             G++         R ID     
Sbjct: 210 FHVLASSGEDAIVFSTSGDYAANIEKAEAVAPAGERPAPGEELKEVHTPGQRTIDAVSQF 269

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGA----------NLTSEQIDIMVSFLSIDLEKSM 252
           L     + VK LL +   D +G+    A           + +E +  +   L++  ++ +
Sbjct: 270 LGMPAERSVKTLLVKAEADENGESGLVALILRGDHTLNEIKAENLPGIAEPLTMATDEEI 329

Query: 253 HELYELVKGTIAGEK-----GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +      G+I   K       +                +         R  E       
Sbjct: 330 EKAIGCKPGSIGPVKLPVPVIVDRSAAHLADFVCGANKDDYHLTGVNWGRDAEISRVEDL 389

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
             ++      +    +              G +Y   ++         T         I 
Sbjct: 390 RNVVEGDASPDGNGTLEIRRGIEVGHIFKLGNKYSKAMNASVLDEHGKTSIMEMGCYGIG 449

Query: 361 A-----------LKSLESSTNNIKEMGPVLITTMDHDSD--SLSKYQMYTQMLRTAGIRA 407
                                +      V I T++               + LR AG   
Sbjct: 450 VSRIVAASIEQNHDEKGIIWPDAIAPFEVAIVTLNGHKSPVVAEAGDKLYEQLRQAGYDV 509

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            +   + +  G +    +    P   +      S G L+ K     ++    +    S+ 
Sbjct: 510 LLDDRNER-PGVKFADIELIGIPHRFVVSERGLSAGTLEYKGRRDEEKQDIPVDEALSFL 568


>gi|308176793|ref|YP_003916199.1| proline--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744256|emb|CBT75228.1| proline--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 595

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 34/107 (31%), Gaps = 1/107 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         + I       + L   +        AG    +      + G +  
Sbjct: 490 DENGLAWPKQVAPADIHIVVTGKGPELLEAAEKLAGQFEAAGKEVILDDRPKVSAGVKFS 549

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            A+    P  ++ G    + G++++KD A G+     ++N  +   A
Sbjct: 550 DAELIGIPTIVVVG-RGLADGVVEVKDRATGERRDVNVENVVAELTA 595



 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  R+   +R      G   +  P L   E  +  G++    D    G+
Sbjct: 40  GIYTWLPLGLKVLARVEAIVREEMNAIGAQEVHFPALLPREPYEQTGRWAEYGD----GL 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D       L  
Sbjct: 96  FRLKDRKDADYLLAP 110


>gi|291276442|ref|YP_003516214.1| ATP phosphoribosyltransferase regulatory subunit [Helicobacter
           mustelae 12198]
 gi|290963636|emb|CBG39468.1| Putative ATP phosphoribosyltransferase; regulatory subunit
           [Helicobacter mustelae 12198]
          Length = 283

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 65/203 (32%), Gaps = 6/203 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+P+G      K  +++  I      ++ + GF+ I TP   +          ++  
Sbjct: 2   LEHEIPQGSKLYFGKTAKLKREIEQGASELFTSRGFEEILTPSFSFLQ------HQKNFS 55

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           N+ +  L   D Q ISLRYD T    R + ++        + + I PVF    +   +  
Sbjct: 56  NRKIIRLNSQDNQQISLRYDSTMDTIRIITKHLARSTGAKKWFYIQPVFSYPSNEIHQIG 115

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                                   +   ++                     +  +I    
Sbjct: 116 VECLESEAFHELLELAILLFEKWNLIPFMQISNTNILQLCAEELGMSKGQILHSQIQELL 175

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
            + L + LI++  I  L+ F   
Sbjct: 176 QNPLLKDLIMIENIQDLESFSKN 198


>gi|82750864|ref|YP_416605.1| prolyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|114152256|sp|Q2YXK5|SYP_STAAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|82656395|emb|CAI80814.1| prolyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 567

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 66/542 (12%), Positives = 142/542 (26%), Gaps = 81/542 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E      I  P L+ ++ L +    
Sbjct: 28  KSGLIKQST-SGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  LQD  G+  +L     +L   + R   +++  +       +         
Sbjct: 86  WGAYGTELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E      ++   Q            A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGS 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------R 198
                 A+     D  +          I +   ++  +  +  +  L             
Sbjct: 206 HTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQSLEKIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELY 256
             D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+ 
Sbjct: 266 LADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           I+  + R         +
Sbjct: 324 NLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIG 354
             IL    +++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEKLSDSSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+              ++      LI+      D                    
Sbjct: 444 ISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV- 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    PL I+ G    S G++++K+   G      I +  +   
Sbjct: 502 LYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIADLMTVIT 560

Query: 469 AR 470
            +
Sbjct: 561 NK 562


>gi|237743345|ref|ZP_04573826.1| prolyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433124|gb|EEO43336.1| prolyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 567

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + +R   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIRKIENIVREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GPEMLRLKDRHERDFVLSPTQEEMITAIVRSDISSYKSLP--INLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFTMKDAYSFH 164



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/334 (10%), Positives = 100/334 (29%), Gaps = 32/334 (9%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I   +   ++ + + + +  +  +          D++    ++G    + E +  N  + 
Sbjct: 254 IHTPDCPTIESLAKYLDVPLEKTVKALTYKDIGTDEIYMVLIRG-DFEVNEVKLKNILNA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +   +T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMVTDEEIEKLGLKKGYIGPYKLPNKIKIVAD-LSVPEISNHIVGSHQKDYHYKNIN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
           Y  +        +R ++    C+    L      E  +    G           +     
Sbjct: 372 YGRDYTADIVADIRKVKVGENCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDEKGQ 431

Query: 344 QNVPATGFSIG--ISRLIVALKSLE-----SSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
            +    G         +  A++            +I      +I     +   ++  +  
Sbjct: 432 SHYMLMGCYGIGVTRTMAAAIEQYNDENGIIWPVSIAPYIVDVIPVNIKNEAQVNLAEKI 491

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L+   I   +     +  G + K AD    P  ++ G      G++++K    G+  
Sbjct: 492 YNNLQEEKIDVMLD-DRDEKPGFKFKDADLIGFPFKVVVGKK-AEEGIVELKIRKTGE-- 547

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                              I  +E+++ +K++++
Sbjct: 548 ----------------TFEISQNEIINKIKELMK 565


>gi|20808685|ref|NP_623856.1| prolyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81848077|sp|Q8R7S9|SYP_THETN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|20517322|gb|AAM25460.1| Prolyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 573

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 71/260 (27%), Gaps = 15/260 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R +L  G         R+  ++ + +R   +  G   +    L  ++   K  
Sbjct: 26  MLKAGLMR-KLAAGIYVYLPLGKRVLKKVEEIVREEMDREGSQEVLMSALIPAELF-KET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D     +F L+D + +   L     ++   L R   +++  +       +       
Sbjct: 84  GRWDVFGPEMFKLKDRNERDFCLGPTHEEVFTDLVRNEVKSYRQLPLILYQIQTKFRDER 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      F        D      + +  +M        +  G+K            
Sbjct: 144 RPRFGVMRSREFIMKDAYSFDADWEGLDESFNKMYRAYCRIFDRCGLKYLVVEADPGAMG 203

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
             D              +    V+   D       +     L E R +   +  K     
Sbjct: 204 GRDS------KEFMVISSVGEAVIAYCDSCGYAANEEKAECLIESRDEEMLEIEKVYTPN 257

Query: 234 SEQIDIMVSFLSIDLEKSMH 253
            + I+ +V FL I   K + 
Sbjct: 258 VKTIEELVDFLKISPSKFVK 277



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 6/122 (4%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE----SSTNNIKEMGPVLITTMDHD 386
           G  Y       K   +   G  I  +   +  +  +        ++     +++     D
Sbjct: 423 GATYTDEEGNEKPIVMGCYGIGINRTVAAIIEQHHDEKGIIWPMSVAPYHVIVVPVNVSD 482

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +     +     L    +   +     +  G +   AD    P+ +  G      G+++
Sbjct: 483 EEQKQIAEKIYNKLLEEKLEVLIDDRDVRA-GVKFNDADLIGIPVRVTIGKK-VKEGIVE 540

Query: 447 IK 448
           IK
Sbjct: 541 IK 542


>gi|49486102|ref|YP_043323.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|81175024|sp|Q6G9V0|SYP_STAAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49244545|emb|CAG42974.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
          Length = 567

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 67/541 (12%), Positives = 142/541 (26%), Gaps = 80/541 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+ L  +   G         R+ N I   +R   E      I  P L+ ++ L +     
Sbjct: 28  KSGLIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-------- 112
                 +  LQD  G+  +L     +L   + R   +++  +       +          
Sbjct: 87  GAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPR 146

Query: 113 ---------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA----- 152
                              +E      ++   Q            A   +    A     
Sbjct: 147 FGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSH 206

Query: 153 -DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------RA 199
                A+     D  +          I +   ++  +     +  L              
Sbjct: 207 THEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKYSTVQPLEKIETPNVKTAQEL 266

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELYE 257
            D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+  
Sbjct: 267 ADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIVN 324

Query: 258 LVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           LV               +   +  V     +           I+  + R         + 
Sbjct: 325 LVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFR 384

Query: 309 AILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIGI 355
            IL    +++      F            G +Y   ++     N           + IGI
Sbjct: 385 FILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGI 444

Query: 356 SRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           SR + A+              ++      LI+      D                    +
Sbjct: 445 SRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV-L 502

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    +  G +   AD    PL I+ G    S G++++K+   G      I +  +    
Sbjct: 503 YDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561

Query: 470 R 470
           +
Sbjct: 562 K 562


>gi|254780870|ref|YP_003065283.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040547|gb|ACT57343.1| prolyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 449

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 58/472 (12%), Positives = 117/472 (24%), Gaps = 65/472 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +  +G         +  + +   IR      G   +  P L+ +D L       D  
Sbjct: 31  MIHQHSKGIYSWLPLGQKALDNVNAIIREEQNRTGAIEMSVPTLQSAD-LWVESGRYDSY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +  L D + + +                                             
Sbjct: 90  GKEMLRLADRNDKAM--------------------------------------IYGPTHE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + +     +   S          +     + +  +           K             
Sbjct: 112 EVMTDIFRSHIKSYRNLPFTFYQIQLKFRDELRPRFGVMRSREFLMKDAYSFDLTPEGSK 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  +  LR   +L    +  ++   G    D S +F   A+    Q+     F+  
Sbjct: 172 HSYNKMFVSYLRIFHRLGLKSI-PMRAESGPIGGDLSHEFIVLADTGETQVFCSKDFMDF 230

Query: 247 DLEKSMHELYELVKGTIAGEK----GFNELVVISELVRKSGYNSNRIKISSTIV-RGLEY 301
            +     +  +++      E+          V +E +  S   + R+      V     +
Sbjct: 231 PIPSENTDFDDIISLNSIVEQWTAPYAATSDVHNEKLFDSLPENKRVSARGIEVGHIFYF 290

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
            T         F   + K   V  GS G G             +                
Sbjct: 291 GTKYSLPMSATFKGADGKDHYVQMGSYGIGAMRVVAAVIESSHDGKGI------------ 338

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS-SKNFGNQ 420
                   +++      LI    HD       +     L   G   ++F     +  G+Q
Sbjct: 339 -----IWPDSVAPFKISLINIKAHDQVCRDACEKIYARLSKVG--CDVFWDDMGEQIGSQ 391

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              AD    PL +I G+   S   ++IK    G      ++   ++   R +
Sbjct: 392 FAVADLLGFPLQVIVGSKFVSDSKVEIKHRLTGIREDMSLEEVINYASHRFS 443


>gi|291525280|emb|CBK90867.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           rectale DSM 17629]
 gi|291529262|emb|CBK94848.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           rectale M104/1]
          Length = 657

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/477 (10%), Positives = 119/477 (24%), Gaps = 93/477 (19%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           P+G        ++++  I D + +  + +G+   +TPL+  SD   K     D    G+F
Sbjct: 266 PKGTKMI----MKLQRWIED-LED--KEWGYVRTKTPLMAKSDLY-KISGHWDHYLDGMF 317

Query: 72  SL----QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            L    +D + + ++LR  +T P                                     
Sbjct: 318 VLGDPEKDGEEEVMALRP-MTCPF--------------QYYVYKAKQHSYR--DLPYRMG 360

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
                  N  S        +          V                 +  L+       
Sbjct: 361 ETSTLFRNEDSGEMHGLTRVRQFTISEGHNV-----------IRPDQCEEELKACFNLNR 409

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
             L    +      +L K+  +  +  LG+    NS        L  E +     F+  D
Sbjct: 410 YVLKVLGLENDVTYRLSKWDPKNTEKYLGDDEYWNSTQEVLRNILIEENVP----FVEAD 465

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            E + +     ++      K    + +  +      ++   I  +   +R    +     
Sbjct: 466 GEAAFYGPKIDIQAKNVYGKEDTMVTIQLDCAIAENFDLYYIDQNGDKIRPYIIH-RTSL 524

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                      +     F +     +                                  
Sbjct: 525 GCYERTLAWLIEHYAGKFPTWLCPEQ---------------------------------- 550

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                       +  +          +     L+   +   +    ++  G +++ A   
Sbjct: 551 ------------VRVLPISEKYADYAKKVADELKRNDVDVTVD-NRAEKIGYKIREARMD 597

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
             P  ++ G  E + G + ++   +G E  + + +        +    I   EL   
Sbjct: 598 KLPYMLVVGADEEADGTVSVRSRFEGNEGVKPLSDFIDQICKEIRTKEI-RVELPEE 653


>gi|253731882|ref|ZP_04866047.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253724292|gb|EES93021.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 567

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 67/541 (12%), Positives = 143/541 (26%), Gaps = 80/541 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+ L  +   G         R+ N I   +R   E      I  P L+ ++ L +     
Sbjct: 28  KSGLIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-------- 112
                 +  LQD  G+  +L     +L   + R   +++  +       +          
Sbjct: 87  GAYGPELMRLQDRHGRRFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPR 146

Query: 113 ---------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA----- 152
                              +E      ++   Q            A   +    A     
Sbjct: 147 FGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSH 206

Query: 153 -DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------RA 199
                A+     D  +          I +   ++  +  +  +  L              
Sbjct: 207 THEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQEL 266

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELYE 257
            D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+  
Sbjct: 267 ADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIVN 324

Query: 258 LVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           LV               +   +  V     +           I+  + R         + 
Sbjct: 325 LVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFR 384

Query: 309 AILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIGI 355
            IL    +++      F            G +Y   ++     N           + IGI
Sbjct: 385 FILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGI 444

Query: 356 SRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           SR + A+              ++      LI+      D                    +
Sbjct: 445 SRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV-L 502

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    +  G +   AD    PL I+ G    S G++++K+   G      I +  +    
Sbjct: 503 YDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561

Query: 470 R 470
           +
Sbjct: 562 K 562


>gi|313885013|ref|ZP_07818765.1| threonine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619704|gb|EFR31141.1| threonine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 651

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 57/468 (12%), Positives = 124/468 (26%), Gaps = 79/468 (16%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +     G++ + TP++  +D                  
Sbjct: 261 SGLPFWLPKGATIRRVIERYIMDKEIALGYEHVYTPVMAKTDLYKTSG------------ 308

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                     + + K            +
Sbjct: 309 -----------------------------------------HWAHYKDDMFPPMDMGDGE 327

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  +          +      +   + I+  +  +   +R    G L  +    +  LN+
Sbjct: 328 MLVLRPMNCPHHMLIYKNEIHSYRELPIRIAELGMM--HRYEKSGALSGLQRVREMTLND 385

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             I +R     D+F  + V  L+ +   D +          ++    +      D EK  
Sbjct: 386 SHIFVRPDQIKDEF--KRVLNLIADVYEDFN---------ITDYRFRLSYRDPEDKEKYF 434

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +EL    E     G  +          +        +    L 
Sbjct: 435 DDYAMWEKAESMLKEAMDEL--GLEYFEAIGEAAFYGPKLDVQFKTAIGLEETMSTIQLD 492

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +        V          DG  +            ++      +  +   +    +
Sbjct: 493 FLLPERFDLTYVGE--------DGQNTHRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWL 544

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             +  +L+           +       L+ AG R EM L  ++  G +++ A     P  
Sbjct: 545 APVQAILLPVSPEHHGDRVE--EIYHALQEAGFRVEMDL-RNEKLGYKIREAQTSKIPYQ 601

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           I+ G  E   G + I+        S  +++  +     VA+ + P ++
Sbjct: 602 IVIGDQEVEDGTVNIRRYGAQDSNSVSLEDFIALLNEDVARKSRPAAD 649


>gi|83816191|ref|YP_446893.1| threonyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83757585|gb|ABC45698.1| threonyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 694

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 3/129 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D    R +   +    F      + V ++    +         V I  +    D +   Q
Sbjct: 556 DEHDERKRPVMIHRAPFGSLERFIGVLIEHCGGNFPTWLAPTQVQIIPVG--DDFVDYAQ 613

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                LR   +R E+   S +  G +++ A+ +  P  ++ G  E   G + ++  A G 
Sbjct: 614 EVAATLRAEDVRVEID-TSDETVGYKIREAETQKVPYMLVVGGDEEEAGTVSVRSHADGP 672

Query: 455 ELSREIKNN 463
           + +  +++ 
Sbjct: 673 QGTVSVQDF 681


>gi|89070906|ref|ZP_01158141.1| ATP phosphoribosyltransferase regulatory subunit [Oceanicola
           granulosus HTCC2516]
 gi|89043545|gb|EAR49756.1| ATP phosphoribosyltransferase regulatory subunit [Oceanicola
           granulosus HTCC2516]
          Length = 357

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 106/350 (30%), Gaps = 31/350 (8%)

Query: 32  SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL 91
            +  ++ + G  P+E  LL  +++L     ++ R     +   D     + LR D T P+
Sbjct: 16  QLMGVFTSAGAQPVEADLLLPAETLLDLYGEDIRARA--YVTSDPLRGEMMLRPDFTVPV 73

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
              V  +      P R    G VFR ++    R  +++Q  ++  G     ADAE+  ++
Sbjct: 74  ---VQMHMAGGAEPARYTYAGEVFRRQETDLTRPNEYLQVGLELFGGDPAEADAEVFALI 130

Query: 152 ADTLEAV---------GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE-----RLIVL 197
           A+ L  +         GI          +      +L  I      +          +  
Sbjct: 131 AEALAPLRLRAVIGDIGILMAAVQGLSTSEDRRQALLRHIWRPRRFRAMLERFGGHGMRR 190

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA---NLTSEQIDIMVSFLSID--LEKSM 252
           R          + V         +      + A    + + ++ ++ S L +       +
Sbjct: 191 RPPLPDPDTLEEPVGKRTAREVAERLEAIRRDAETPPIAAHEVALIDSLLGLRETAPNVL 250

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             L ++           + L    + +   G +   +    +  R          E   G
Sbjct: 251 AALRDIAVDLPMISTAVDRLAARLDALVARGIDVEGLAFEGSYGR-------TSMEYYDG 303

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           F      Q       V  GGRYD L               +    L+  +
Sbjct: 304 FVFGFSSQDRPDLAPVATGGRYDALTRVLGQGREIPAVGGVIRPGLLARM 353


>gi|256028463|ref|ZP_05442297.1| prolyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766384|ref|ZP_06525762.1| prolyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717939|gb|EFD81951.1| prolyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 567

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + +R   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIRKIENIVREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GPEMLRLKDRHERDFVLSPTQEEMITAIVRSDISSYKSLP--INLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFTMKDAYSFH 164



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/334 (10%), Positives = 98/334 (29%), Gaps = 32/334 (9%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I   +   ++ + + +    +  +          D++    ++G    + E +  N  + 
Sbjct: 254 IHTPDCPTIESLAKYLDAPLEKTVKALTYKDMGTDEIYMVLIRG-DFEVNEVKLKNILNA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMATDEEIEKLGLKKGYIGPYKLPNKIKIVAD-LSVPEISNHIVGSHQKDYHYKNIN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
           Y  +        +R ++    C+    L      E  +    G           +     
Sbjct: 372 YGRDYTADIVADIRKVKVGENCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDEKGQ 431

Query: 344 QNVPATGFSIG--ISRLIVALKSLE-----SSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
            +    G         +  A++            +I      +I     +   ++  +  
Sbjct: 432 SHYMLMGCYGIGVTRTMAAAIEQYNDENGIIWPVSIAPYIVDVIPVNIKNEAQVNLAEKI 491

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L+   I   +     +  G + K AD    P  ++ G      G++++K    G+  
Sbjct: 492 YNNLQEEKIDVMLD-DRDEKPGFKFKDADLIGFPFKVVVGKK-AEEGIVELKIRKTGE-- 547

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                              I  +E+++ +K++++
Sbjct: 548 ----------------TFEISQNEIINKIKELMK 565


>gi|183597570|ref|ZP_02959063.1| hypothetical protein PROSTU_00851 [Providencia stuartii ATCC 25827]
 gi|188023065|gb|EDU61105.1| hypothetical protein PROSTU_00851 [Providencia stuartii ATCC 25827]
          Length = 575

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 48/161 (29%), Gaps = 8/161 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  D     +R+  ++ + +R   EN G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYDWLPTGVRVLRKVENIVREEMENAGSIEVSLPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +    D   +   L     ++   L R    ++  +          +R     R   
Sbjct: 90  GPELLRFADRGERPFVLGPTHEEVITDLVRNEITSYKQLPLNLFQIQTKFRDEVRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
                F             S +     M    +     +G 
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDAMYEAYSKIFTRIGF 190



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     L+  GI         +  G  
Sbjct: 461 DERGIIWPDAIAPFHVAILPMNMHKSYRVKEVAEKLYADLKAQGIDVIFDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K     ++    + N  S+ + ++A
Sbjct: 520 FADMELIGVPYTIVIGDRNLDNNQVEYKARRNDEKALIGLDNVVSFLKEKLA 571


>gi|119717421|ref|YP_924386.1| prolyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|152112937|sp|A1SLL4|SYP_NOCSJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119538082|gb|ABL82699.1| prolyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 589

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 19/129 (14%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L  +         V I     D    +  +     L   G+          + G + K
Sbjct: 480 DELGLAWPREVAPADVHIVATGKDEHVFAAAERIAHELDKQGVEVLYDDRPKVSPGVKFK 539

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A+    P  ++ G G  + G +++KD   G                   +  +P   LV
Sbjct: 540 DAELIGVPTIVVVGKG-LAAGTIEVKDRRTG------------------QRQDVPADHLV 580

Query: 483 STVKKILQE 491
             V  I++ 
Sbjct: 581 DRVIAIVRA 589



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+  +I + IR   +  G   +  P L   E  ++  ++    D    G+
Sbjct: 40  GIYTWLPLGLRVLRKIENVIREEMDAIGAQEMLFPALLPREPYEATNRWTEYGD----GI 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G    L  
Sbjct: 96  FRLQDRKGADYLLGP 110


>gi|157363113|ref|YP_001469880.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166980167|sp|A8F3T2|SYP_THELT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157313717|gb|ABV32816.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 575

 Score = 68.3 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 61/528 (11%), Positives = 128/528 (24%), Gaps = 83/528 (15%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R  ++I   +R      G   +  P+++ ++ L K     D     
Sbjct: 34  KIAAGVYSYLPLAKRTLSKIEAIVRKEMNEIGAQEVSMPVIQPAE-LWKTTGRWDDYGPE 92

Query: 70  VFSLQDDDGQWISLRY------------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
           +  L+D   +  +L              +L     R   +    +      YR     R 
Sbjct: 93  MMKLKDRHERDFTLGPTHEEVFTHMVKDEL-----RSYKQLPLFLYQIGPKYRDEIRPRF 147

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD- 176
                  F         +   S                E +G+K              + 
Sbjct: 148 GLLRAREFIMKDGYSFHDSDQSLNETYEACKNAYRKITEKIGLKYIIIEAASGAIGGNES 207

Query: 177 -GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG--------DFT 227
              +    +   + L        + D+   +  +  +    E   +              
Sbjct: 208 HEFVSFAPVGETNLLKCEKCGYSSNDEQAPYRGKYHRDEEIEKPVELIHTPNVRSVEQVA 267

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE----LVVISELVRKSG 283
           +  N++  +I   + F+  +         +        +   N+    L    E+++   
Sbjct: 268 EFLNVSKNKIVKSLLFIGRNGFVMALIQGDRELNIEKLKVHVNDQSLRLAEPDEVLQAFR 327

Query: 284 YNSNRIKISSTIVRGLEYYTGCVY--EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
                I         +    G  Y    ++G    +        G       Y  L    
Sbjct: 328 VPIGFIGPVGIEKVHVVADCGIKYMKNVVVGGMKKDYHYINANVGRDFSPDSYTDLRVVQ 387

Query: 342 KGQNVPATGFSIGISRLIVAL----------KSLESSTNNIKEMGPVLITTMDHDSDSLS 391
                P  G  +  S+ I             K++ +   + K      I        S +
Sbjct: 388 PNDPCPVCGEQLTGSKGIEIAQIFKLGTKYSKAMNALYMDDKGEVKPFIMGCYGWGISRT 447

Query: 392 KYQMY-----------------------------------TQMLRTAGIRAEMF---LGS 413
              +                                     Q L  + + +E+       
Sbjct: 448 MAAIVEQLHDEDGILWPRSVAPFELIITVVSAQDQDQRIFAQKLYNSLLSSEIDVLLDDR 507

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             + G + K AD    PL I  G      GM+++K     K +    +
Sbjct: 508 DISPGMKFKDADLIGFPLRITVGKS-LKEGMVELKSRNSSKSIKVSAE 554


>gi|328954064|ref|YP_004371398.1| Prolyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454388|gb|AEB10217.1| Prolyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 573

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 33/109 (30%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  D     + +  ++   +R      G   +  P ++ ++ L +        
Sbjct: 31  MIRKLTSGIYDYLPLGLMVLRKVEAIVREEMNCAGAQELLLPAVQPAE-LWQESGRWQIY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            K +   QD   +         ++   L R    ++  +       +  
Sbjct: 90  GKELLRFQDRHDRDYCFGPTHEEVITDLVRREVHSYRQLPLNLYQIQTK 138



 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 19/126 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +     +L+    +D D+++      Q +R AGI       + +  G + K  D 
Sbjct: 462 IFPMPLAPFQVLLVPIAANDVDTMAVASRLYQEIRAAGIEVLFDDRNER-PGIKFKDGDL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ ++ G    ++G  +++                       A   IP++ LV+ ++
Sbjct: 521 LGIPVRVVLGPKTLAQGAAEVRQRRSR------------------AVQLIPLASLVAYLQ 562

Query: 487 KILQEN 492
             +Q  
Sbjct: 563 DHIQAE 568


>gi|197286110|ref|YP_002151982.1| prolyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227357229|ref|ZP_03841586.1| prolyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|226701319|sp|B4F249|SYP_PROMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194683597|emb|CAR44486.1| prolyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227162492|gb|EEI47481.1| prolyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 571

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 46/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  D     +R+  +I   +R   +N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYDWMPTGVRVLRKIEKIVREEMDNAGSLEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +    D   +   L     ++   + R    ++  +       +             
Sbjct: 90  GPELLRFTDRGERPFVLGPTHEEVVTDIVRNEITSYKQLPLNLYQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    ++    +G
Sbjct: 150 MRSREFIMKDAYSFHISQESLQETYDRMYQAYSNIFTRIG 189



 Score = 44.1 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 31/110 (28%), Gaps = 3/110 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +      +      V I  M+       K   +     LR  GI   +F    +  G  
Sbjct: 461 DARGIIWPDAIAPFQVAILPMNMHRSYRVKEVAEKLYADLRAQGIDV-LFDDRKERPGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +    P  I+ G        ++ K      +    + +  ++ + +
Sbjct: 520 FADMELIGVPHTIVIGDRNLDNEQVEYKARRSDDKSLVNVNDVVAFIKEQ 569


>gi|147677598|ref|YP_001211813.1| prolyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189083504|sp|A5D2U6|SYP_PELTS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146273695|dbj|BAF59444.1| prolyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 570

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 43/155 (27%), Gaps = 8/155 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  +I   +R   +  G   +  P+++ ++   +     D     +F L
Sbjct: 38  GVYTYLPLAMRVIKKIEQIVREEMDRQGGQELLMPIIQPAEIWQES-GRWDVYGPELFRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
           +D   +  +L     ++   L R    ++  +       +                  F 
Sbjct: 97  KDRHDRDFALGPTHEEIITVLVRGEVSSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  D        +  +M        +  G+ 
Sbjct: 157 MKDLYSFDRDEEGLNVSYMKMYEAYTRVFQRCGLH 191



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 7/130 (5%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGI+R + A               +I     V+I     D    +  +     L  A
Sbjct: 441 CYGIGITRTMAAAIEQNHDRDGIIWPASIAPFHVVVIPVNVKDGGQYAMAEEVYSRLWAA 500

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           GI A +   + +  G + K AD    PL I  G       +++I+    G+ +   +   
Sbjct: 501 GIEAVLDDRTERA-GVKFKDADLIGYPLRITIGAKAVEEKLVEIRIRKNGETVFVPMNEL 559

Query: 464 ESWREARVAQ 473
           E   E  + +
Sbjct: 560 EEKVEDMLKE 569


>gi|314933442|ref|ZP_07840807.1| proline--tRNA ligase [Staphylococcus caprae C87]
 gi|313653592|gb|EFS17349.1| proline--tRNA ligase [Staphylococcus caprae C87]
          Length = 567

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 68/541 (12%), Positives = 154/541 (28%), Gaps = 81/541 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E+     I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNISKIVREEMESIDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  L+D +G+  +L     ++   L R   +++  +       +         
Sbjct: 86  WGAYGPELMRLKDRNGREFALGPTHEEVVTSLVRDELKSYKRLPLTLFQIQSKYRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E+     ++                A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEESLDATYQDMYNAYSRIFKRVGINARPVVADSGAIGGN 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR------------ 198
                 A+     D  +  N       I +   ++   + +     L             
Sbjct: 206 HTHEFMALSEIGEDTIVYSNESDYAANIEKAEVIYYPSEKHTETAELSNIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELY 256
             D L++   + +K ++ +   +      +G +  ++    + ++   D  +  S  E+ 
Sbjct: 266 LADFLNRPLDEIIKTMIFKVDGEFMMILIRGHHELNDV--KLKAYFGTDNVEMASQDEIV 323

Query: 257 ELVKGTI--AGEKGFNELVVISELVRKS------GYNSNRIKISSTIV-RGLEYYTGCVY 307
            LV       G     E+ + ++   K       G N +     +  V R         +
Sbjct: 324 NLVGANPGSIGPIHNKEIKIYADNYVKDLNNLVIGANEDGYHYVNANVERDFNIDEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIG 354
             IL   ++++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEMLSDGSGKAQFAEGIEVGQVFKLGTKYSEAMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+    +         ++      LIT      D           L        
Sbjct: 444 ISRTLSAIVEQNNDENGIIWPKSVTPFDLHLITINPKKDDQRELGDQLYAQLNDK-FDV- 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    PL ++ G      G++++K    G+     + + E++ +
Sbjct: 502 LYDDRKERAGVKFNDADLIGLPLRVVVGKR-AEEGVVEVKQRLNGESEEIHVNDLENYLK 560

Query: 469 A 469
            
Sbjct: 561 D 561


>gi|195112941|ref|XP_002001030.1| GI22205 [Drosophila mojavensis]
 gi|193917624|gb|EDW16491.1| GI22205 [Drosophila mojavensis]
          Length = 1598

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 63/480 (13%), Positives = 134/480 (27%), Gaps = 54/480 (11%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL    S  +        N     L    G  + L 
Sbjct: 981  LIEFVKAKVVNVFRKHGAIEVDSPLLSPLSS--RNSHSSANSNA--VHLMTHSGSVVLLP 1036

Query: 85   YDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N   ++               N          F            + 
Sbjct: 1037 TDLRTQFARHVTMNGVNLIRRYCVDRVYREERVFNFHPKQNYECCFDIITPSTSSQLVDA 1096

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   + + L  +  +  +  I +N+  +L  IL    +      +    +L  I+ 
Sbjct: 1097 ELLSLAFEIINELPRL--RERNIAIRMNHTNLLRSILIFCNVPKSQYSSLFEGLLDFIEG 1154

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      +     ++  S        L +  +    S +     KS+          
Sbjct: 1155 RISRFQFHSSITAIMEKSRTSAQTLMDMMLANFLLTGSRSSVDESALKSLMRGKGEAASL 1214

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G      L  +  ++  +        I+      + + +      +       +  + 
Sbjct: 1215 ARGA-----LRELETVIGLAYSLGVTCPINIWAGLPINFESASTGGIVWQMTADLKPNRS 1269

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNVP-----ATGFSIGISRLIVALKSL----ESSTNNIK 373
                 +  G RYD ++  F+ Q         T   +  + L ++L  L            
Sbjct: 1270 GQPSVLAMGQRYDAMLHDFQKQAQSFNAALPTRGMLSGAGLTLSLDKLVAAVGKDYAKDC 1329

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF--LGSSKNFGNQLKYA---DRRN 428
                + I         L       ++L + GIR  +   +GS          A    R  
Sbjct: 1330 RAIDIGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIVETVGSGG------DEAQDLSRLG 1382

Query: 429  CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                I+        G L+++                S+   R  +  +  +ELV  ++K+
Sbjct: 1383 ALHVILVAE----NGALRVR----------------SFDRDRFQERHLTRAELVEFIQKM 1422


>gi|296329234|ref|ZP_06871735.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296153590|gb|EFG94407.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 567

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + IR   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIRKIENIIREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GPEMLRLKDRHERDFVLSPTQEEMITAIIRSDISSYKSLP--INLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFTMKDAYSFH 164



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/334 (9%), Positives = 98/334 (29%), Gaps = 32/334 (9%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +   ++ + + + +  +  +          D++    ++G    + E +  N  + 
Sbjct: 254 VHTPDCPTIESLAKYLDIPLERTVKALTYKDMGTDEIYMVLIRG-DFEVNEVKLKNILNA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMATDEEIEKIGLKKGYIGPYKLPAKIKIVAD-LSVPEVSNHIVGSHQKDYHYKNVN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
           Y+ +      T +R +     C+    L      E  +    G           +     
Sbjct: 372 YDRDYTADIVTDIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDEKGK 431

Query: 344 QNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMY 396
                 G         +A                      V +   +  ++  +S  +  
Sbjct: 432 TQFMLMGCYGIGVTRTMAASIEQNNDENGIIWPVSIAPYIVDVIPANIKNEVQVSLAEKI 491

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L+   I   +     +  G + K AD    P  ++ G      G++++K    G+  
Sbjct: 492 YNELQEEKIDVMLD-DRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVELKIRRTGE-- 547

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                            + +  +E+++ +K++++
Sbjct: 548 ----------------TLEVSQNEVIAKIKELMR 565


>gi|85704831|ref|ZP_01035932.1| ATP phosphoribosyltransferase regulatory subunit [Roseovarius sp.
           217]
 gi|85670649|gb|EAQ25509.1| ATP phosphoribosyltransferase regulatory subunit [Roseovarius sp.
           217]
          Length = 361

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 106/335 (31%), Gaps = 48/335 (14%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVA 96
           +E  G  P+ET +L+ ++ L     ++ R    V S      Q   LR D T P+ +   
Sbjct: 18  FEAAGALPVETSVLQPAEVLLDLYGEDIRARAYVTSDALRGEQM--LRPDFTVPVVQMHM 75

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET-ADAEMCMMMADTL 155
           E+      P R    G VFR ++    R  ++IQ   +    +A   AD E+  M  + L
Sbjct: 76  EHGAE---PARYTYSGEVFRRQEEDAQRANEYIQVGYEIFERNAPEAADTEVFSMFFNIL 132

Query: 156 EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL------- 208
             +G+          +  IL   +E +      K   R  + R                 
Sbjct: 133 RPLGL-----RAATGDIGILMAAVEGLRTTDRRKAALRRHIWRPRRFRALMDRFSGRAVV 187

Query: 209 -QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF----------------------LS 245
            +    LL         +   G     E  + + +                       + 
Sbjct: 188 PEPRSALLAAAEPMAGIEPLIGLRGPDEIANRINALREDVTAGPISASEVQLLDAILAVR 247

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              + ++  L ++     A +   + L    E + + G +  ++   ++  R        
Sbjct: 248 ETSDNALERLRDIAVDMPAIQGAVDRLGRRLEAMTERGIDITKLDFEASYGR-------T 300

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
             E   GF      +       +  GGRYD L  +
Sbjct: 301 QMEYYDGFVFGFYAENRPDLPPIATGGRYDALTRQ 335


>gi|148244484|ref|YP_001219178.1| prolyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166980170|sp|A5CX68|SYP_VESOH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146326311|dbj|BAF61454.1| prolyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 560

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L ++L  G        IR+  ++ + IR      G   +  P+++ ++ L K     ++ 
Sbjct: 31  LISKLALGLYSYLPIGIRVLQKVENIIRQEMNKSGAQEVLMPIVQPAE-LWKESGRWNKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +    D   +   L     ++   LAR    ++  +       +  
Sbjct: 90  GAELLRFIDRHQREFCLGPTHEEVITHLARQYLRSYKQLPMNFYQIQTK 138


>gi|15921207|ref|NP_376876.1| threonyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|22654128|sp|Q973C8|SYT_SULTO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15621992|dbj|BAB65985.1| 540aa long hypothetical threonyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 540

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 55/444 (12%), Positives = 114/444 (25%), Gaps = 29/444 (6%)

Query: 51  EYSDSLGKFLPDEDRPNK-------GVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTI 102
           E  D   K+L +    +         +FS  D+    ++L  Y     + R     F   
Sbjct: 118 EELDQYLKWLEEVSEYDHRIIGERLDLFSFPDETAPGLALFHYKG--QIIRKELMKFMEE 175

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
           +     Y+        +    +         D +       +      M      +  K 
Sbjct: 176 INESMGYQEVFTAEIYRSILWKTSGHYDYYKDKMVLFKMEDEELGLKPMNCPAHILIYKS 235

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN 222
                     +  +  L        +      +     D    F  +       +     
Sbjct: 236 KTRSYKDLPIRFSEFGLVFRWEKRGELYGLLRVRGFVQDDGHIFLTEDQIKDEVKMLVKK 295

Query: 223 SGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           + D         + + I    LS   ++S+       K T A     NEL +   +  K 
Sbjct: 296 TIDVLSIFGFKGDDVRI---NLSTRPDESIGSDELWEKATNALVSALNELGIKYIVKEKE 352

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
           G                 ++     +     P   + +              D   SR +
Sbjct: 353 GAFYGPKIDFDIRDSLGRWWQLSTIQVDFNLPERFKLEY------------IDKDGSRKR 400

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +    +      + + L+              V I  +  D +           L+ 
Sbjct: 401 PVMIHRAIYGSIERFMAILLEHFRGKLPTWLSPVQVRILPISKDVE--DYALNLLSKLKE 458

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             IR E+ + S +    ++K A     P  II G  ER  G + ++     +    +  +
Sbjct: 459 NKIRVELDM-SDETLSKRIKKAYDEGVPYMIIVGKKEREEGKVTVRGRNNVEIRGVKFDD 517

Query: 463 NESWREARVAQITIPISELVSTVK 486
                   +    +  S  ++ +K
Sbjct: 518 FLKALLEEIRNRDLNQS-AINKLK 540


>gi|293390782|ref|ZP_06635116.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951316|gb|EFE01435.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 571

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 51/166 (30%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G  +     +R+  ++ + IR+     G   +E P+++ ++ L +  
Sbjct: 26  MLRAGMIRP-LASGLYNWLPTGLRVLKKVENIIRDEMNKSGAIEVEMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              ++    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYRQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M    ++    +G
Sbjct: 144 RPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMYQTYSNIFTRLG 189



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/92 (9%), Positives = 28/92 (30%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L+  G+         +  G      +    P  ++ G    
Sbjct: 480 MNMYKSESVQQFAEDLYRTLQAQGVEVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G ++ K+   G++          + ++++ 
Sbjct: 539 ANGEIEYKNRRTGEKQMIAKAQLLDFLKSQIN 570


>gi|261867437|ref|YP_003255359.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412769|gb|ACX82140.1| prolyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 571

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 51/166 (30%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G  +     +R+  ++ + IR+     G   +E P+++ ++ L +  
Sbjct: 26  MLRAGMIRP-LASGLYNWLPTGLRVLKKVENIIRDEMNKSGAIEVEMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              ++    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYRQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M    ++    +G
Sbjct: 144 RPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMYQTYSNIFTRLG 189



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/92 (9%), Positives = 28/92 (30%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L+  G+         +  G      +    P  ++ G    
Sbjct: 480 MNMYKSESVQQFAEDLYRTLQAQGVEVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G ++ K+   G++          + ++++ 
Sbjct: 539 ANGEIEYKNRRTGEKQMIAKAQLLDFLKSQIN 570


>gi|254509978|ref|ZP_05122045.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacteraceae
           bacterium KLH11]
 gi|221533689|gb|EEE36677.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacteraceae
           bacterium KLH11]
          Length = 362

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 60/375 (16%), Positives = 117/375 (31%), Gaps = 49/375 (13%)

Query: 23  IRIRNRILDS---IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
           +  R++I      +R  +E  G   ++TPLL+ +++L     ++ R    V S      Q
Sbjct: 1   MANRSQIQARAAMMRVRFEAAGAQVVDTPLLQPAETLLDLYGEDIRARAYVTSDALRGEQ 60

Query: 80  WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
              LR D T P+   V  +      P R    G VFR ++H P R  +FIQ   +    +
Sbjct: 61  M--LRPDFTLPV---VQMHMREGAEPARYTYSGEVFRRQEHDPDRANEFIQVGYEVFDRN 115

Query: 140 AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR- 198
                         +L A+ ++         +  IL   +  +      K      + R 
Sbjct: 116 DLAGADAEVF----SLFALQLRGLPLRAATGDIGILRAAVAGLRTTERRKTALMRHLWRP 171

Query: 199 ------AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK-- 250
                       +     ++  L +     + D        + +I+  +  L  D E   
Sbjct: 172 RRFRLLLDRFAGRKPEPELRAELLDAENPMAFDAPMIGKRRASEIEARIEALRADRETPP 231

Query: 251 ---------------------SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                                ++ +L ++           + L      ++  G N +++
Sbjct: 232 ISDNELVGLETLLNVRETMPFALEQLRDVAVDLPQITPALDRLEARIAALQARGVNVDQL 291

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
              +   R          E   GF      +       +  GGRYD L  +  G      
Sbjct: 292 DFEAAYGR-------TSMEYYDGFVFGFYAEGRADLPPIATGGRYDALTWQLGGGAEIPA 344

Query: 350 GFSIGISRLIVALKS 364
              +    L++ ++ 
Sbjct: 345 VGGVLRPDLMLMVEE 359


>gi|124507217|ref|XP_001352205.1| histidyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|23505235|emb|CAD52015.1| histidyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 642

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 8/95 (8%)

Query: 2   GKKTKLRAELPRGFADCP-TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
            KK     +  +G  +         R  + +  + I EN+ F   + P+LE  D   K  
Sbjct: 50  NKKRIFTVQYVKGIRNFINPTNYEKREYLFNIWKKIAENFSFSFYDLPILESYDLFRKS- 108

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYV 95
                P    +     + + + LR ++T  L RY+
Sbjct: 109 -----PINESYDFI-KNNKHLILRPEITPQLIRYL 137



 Score = 67.2 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 118/377 (31%), Gaps = 27/377 (7%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
            ++      +   IG  FR E+    R R+  Q ++D +G     A+ E+  M+      
Sbjct: 256 KYENFNKIFKMCTIGQCFRYEQTSRLRKREHYQWNLDILGIENIYAEVELLSMLITFFNK 315

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV-------LRAIDKLDKFGLQG 210
           V +      I +N++ I++ IL  I     D L     +       L  +DK  K     
Sbjct: 316 VHMDEKHIVIKLNHKYIIEYILYSIFQKDMDNLFSYNKMKQEIQNILHILDKFYKVNNSS 375

Query: 211 VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN 270
            KLLL +       +  +      + I  +          + +  Y+ +  +      FN
Sbjct: 376 FKLLLYKKFQYLQKENIRYLYNILQNIKHINHLEKFVKCHNTNIYYKNIDTST----HFN 431

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
               +    +++  N N  K+  TIVRG++YY   V+E        +         +   
Sbjct: 432 NFKNVFTYFQQANLN-NFFKLDLTIVRGMDYYNNMVFEIYYKKDKSHRAICGGGRYNFFL 490

Query: 331 GGR--YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT------- 381
                Y    +            +   +   +++     + N I  +             
Sbjct: 491 NNNKIYAVGCAMGDVVITDLLFNNNKKNNSFLSISEQNKTNNYIHVLSYFPYFHNITQNF 550

Query: 382 ---TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
                 + ++   +Y      LR   I     L +  N    +K A   N    +     
Sbjct: 551 NQQINSNTTNVYKEYYSILNKLRNNNIIVHSLLKNYTNLSKVIKKAIHMNANHILFFSKD 610

Query: 439 ERSRGMLQIKDLAKGKE 455
                   +K+L   ++
Sbjct: 611 ---HNSFLLKNLKTKEQ 624


>gi|327311872|ref|YP_004338769.1| threonyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326948351|gb|AEA13457.1| threonyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 612

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 71/264 (26%), Gaps = 6/264 (2%)

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN---- 270
           L      +   FTK  N   E    +   +  ++ K   +   L   T    KG      
Sbjct: 331 LRRFYMPDLHIFTKNLNEAIEVTYKLHEKIFEEIRKINRDYVSLYNITAEFYKGHKDYLV 390

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL               +       V             I  F +            +  
Sbjct: 391 ELAKREGKPILLRILPEQKYYWVLNVEFHIIDELGRPREIATFQIDVGNAMRFGIKYIDE 450

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
             +    V            +   +      ++           + PV +  +  + + L
Sbjct: 451 ENKVKYPVIIHTAILGSVERYIFALFDTAALMEKRGEVPRLPTWITPVQVRIIPVNREYL 510

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                    L   GIR ++     +    +++ A+R   P  I+ G  E S  ML ++  
Sbjct: 511 RPASDLADELERRGIRVDID-DREETLSRKIRDAEREWIPYIIVIGQKEASSNMLTVRIR 569

Query: 451 AKGKELSREIKNNESWREARVAQI 474
            KG ++    ++     E  ++  
Sbjct: 570 GKG-QVQMSRQDLVEVVEKEISGF 592


>gi|300176200|emb|CBK23511.2| unnamed protein product [Blastocystis hominis]
          Length = 124

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 8/114 (7%)

Query: 378 VLITTMDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
           V I  +  +   ++ S        LR   I   M  G + +    +K A   N    ++ 
Sbjct: 14  VGIVQIGDEECRETRSAALKIENKLRQHHIAT-MLCGGNGSLKKGIKEASASNLRFVVLL 72

Query: 436 GTGERS---RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           G  E     +  + +KDL   ++    + +        V +     SE++  ++
Sbjct: 73  GESEMELFKQSRIVVKDLTTREQKDYSLDDFIHLVSWDVCEKH--ESEVILEIQ 124


>gi|254373305|ref|ZP_04988793.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151571031|gb|EDN36685.1| prolyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 565

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 55/538 (10%), Positives = 143/538 (26%), Gaps = 78/538 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R+     G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPLGVKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IK 161
             R        F                     M     + L+ +G            I 
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYATYCNILDKIGLAYRPVKADTGAIG 203

Query: 162 RNDYHIGINNRKILDGILEK-----------IGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
            ++ H         + I+             +  +    L++R+     I+K+    ++ 
Sbjct: 204 GDNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKPDLSKRVNSQNTIEKIHTPNIKT 263

Query: 211 VKLLLGEGRTDNSGDFTK-----------------GANLTSEQIDIMVSFLSIDLEKSMH 253
           ++ L  E   D                           L   +I+ +   ++     +  
Sbjct: 264 IEKLCKEMSFDIKKTIKTMVIKDAEGNFFALVIRGDHELNETKINKLEQIVAPYTLATKE 323

Query: 254 ELYELVKGTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E++ +          +        +   +    +       +    +    R +  Y   
Sbjct: 324 EIFSIFNANPGSLGIYNCPISIIADYSAIAITDLVCGANQDDYHFTNVNWDRDVTNYQIA 383

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKG------QNVPATGFS 352
               ++   +  + +  +   +    G        Y   ++          + +    + 
Sbjct: 384 DIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCYG 443

Query: 353 IGISRLIVALKSL---ESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGI 405
            G+SR++ A       E+     + + P  +  +                  Q L   GI
Sbjct: 444 FGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDGI 503

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +    ++  G     AD       ++ G     +G+++ K+    ++    I   
Sbjct: 504 DVLLDDRGAR-PGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAEL 560


>gi|167039496|ref|YP_001662481.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300915254|ref|ZP_07132569.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725178|ref|YP_003904929.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|226701350|sp|B0K5F2|SYP_THEPX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166853736|gb|ABY92145.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300888978|gb|EFK84125.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582239|gb|ADN55638.1| prolyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 570

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R +L  G         R+  ++   +R   +  G   +    L  ++ L K  
Sbjct: 26  MLKAALMR-KLASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELL-KES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +F L+D + +   L  
Sbjct: 84  GRWDVFGPEMFKLKDRNERDFCLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V+I  ++  +++ ++  +     L+  GI   +     +  G + 
Sbjct: 459 DEKGIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRA-GVKF 517

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             AD    P+ I  G      G+++IK L + +E                    + IS++
Sbjct: 518 NDADLLGIPIRITVGKK-VDDGIVEIK-LRENEEAE-----------------EVKISDV 558

Query: 482 VSTVKKILQEN 492
           V  VK I++E 
Sbjct: 559 VEKVKNIIKEK 569


>gi|327399806|ref|YP_004340675.1| tRNA synthetase class II (G H P and S) [Hippea maritima DSM 10411]
 gi|327182435|gb|AEA34616.1| tRNA synthetase class II (G H P and S) [Hippea maritima DSM 10411]
          Length = 309

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 5/151 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +P G          IR +  ++I   +++ G++ I TP   Y DS+ +FL +  +    
Sbjct: 3   RIPSGVVQFFEPLTSIRRKAENTIIEFFKSKGYEEIITPTFVYEDSVSEFLFEPLKNK-- 60

Query: 70  VFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           +F + D + GQ + LR D+T  + + V         P R      V+R+ K   G+ R+F
Sbjct: 61  LFKIVDKNSGQTMILRADITLQITQAVL--LGDFKMPARLCYAQNVYRDIKEHLGQKREF 118

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
            Q  V+  G     AD E+  +  D+L  +G
Sbjct: 119 KQIGVELFGIKEVDADFEVVSLAIDSLSLMG 149


>gi|75676749|ref|YP_319170.1| ATP phosphoribosyltransferase regulatory subunit [Nitrobacter
           winogradskyi Nb-255]
 gi|74421619|gb|ABA05818.1| ATP phosphoribosyltransferase regulatory subunit [Nitrobacter
           winogradskyi Nb-255]
          Length = 390

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 76/373 (20%), Positives = 133/373 (35%), Gaps = 54/373 (14%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           D + + +   G+   E  +L+ ++       ++ R  K ++   D  G+ + LR DLT P
Sbjct: 22  DRLLSSFIQAGYIKAEPAILQPAEPFLDLSGEDIR--KSLYLTSDPGGEELCLRPDLTIP 79

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA----- 145
           +AR           P     +GPVFR        F Q           +A  A+      
Sbjct: 80  VARDYLA-SVRAGKPAGFCYLGPVFRYRGGRSSEFPQAGIESFGREDRAAADAEMLALGL 138

Query: 146 ------------------EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
                              +   + D L+   + R       N +  L   +E++ L   
Sbjct: 139 EAVAAFGIADVDIRTGDVALFTALIDALDLYPVWRRRLMKDFNRKVSLAQDIERLTLASG 198

Query: 188 DKLNERLIVLRA-------------IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN--L 232
              NE   VL A              D +   G   V     +   D   + +   +  L
Sbjct: 199 PGRNEYEGVLAALAGSDRKAALALVTDMMSIAGATIVGGRSLDEIADRFLEQSTLKSGAL 258

Query: 233 TSEQIDIMVSFLSI--DLEKSMHELYELVKGT-IAGEKGFNELVVISELVRKSGYNSNRI 289
             E + I+  FLSI  D ++++ +L  L     +   +  +++   +  +   G  +N+I
Sbjct: 259 PHEALTIIKRFLSISGDPDEALGQLRALASDAGLDIHQAIDQVESRTGFMAARGVETNKI 318

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG-LVSRFKGQNVPA 348
             +++  RG++YYTG  +E  L                +  GGRYD  +        +PA
Sbjct: 319 SFATSFGRGVDYYTGFEFELHLKDNGGE---------PLVAGGRYDDLMTRLGAAAPIPA 369

Query: 349 TGFSIGISRLIVA 361
            GFS+ I  L  A
Sbjct: 370 VGFSVWIEALTDA 382


>gi|256752497|ref|ZP_05493354.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748632|gb|EEU61679.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 570

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R +L  G         R+  ++   +R   +  G   +    L  ++ L K  
Sbjct: 26  MLKAALMR-KLASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELL-KES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +F L+D + +   L  
Sbjct: 84  GRWDVFGPEMFKLKDRNERDFCLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V+I  ++  +++ ++  +     L+  GI   +     +  G + 
Sbjct: 459 DEKGIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRA-GVKF 517

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             AD    P+ I  G      G+++IK L + +E                    + IS++
Sbjct: 518 NDADLLGIPIRITVGKK-VDDGIVEIK-LRENEEAE-----------------EVKISDV 558

Query: 482 VSTVKKILQEN 492
           V  VK I++E 
Sbjct: 559 VEKVKNIIKEK 569


>gi|237742688|ref|ZP_04573169.1| prolyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430336|gb|EEO40548.1| prolyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 567

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + +R   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GPEMLRLKDRHERDFVLSPTQEEMITAIVRSDISSYKSLP--INLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFTMKDAYSFH 164



 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/335 (11%), Positives = 102/335 (30%), Gaps = 34/335 (10%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +   ++ + + + +  +  +          D++    ++G    + E +  N  + 
Sbjct: 254 VHTPDCPTIESLAKYLDVPLERTVKALTYKDMGTDEIYLVLIRG-DFEVNEVKLKNILNA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMATDEEIEKLGLKKGYIGPYKLPTKIKIVAD-LSVPEISNHIVGSHQKDYHYKNVN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG---GGGRYDGLVSR 340
           Y  +        +R  +    C+    L      E  +    G          Y     +
Sbjct: 372 YGRDYTADIVADIRTAKVGENCIIGGKLHSARGIECGQIFKLGDKYSKVMNATYLDENGK 431

Query: 341 FKGQNVPATGFSIGISRLIVALKSLE-----SSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            +   +   G  +    +  A++            +I      +I     +   +S  + 
Sbjct: 432 TQYMLMGCYGIGV-TRTMAAAIEQNNDENGIIWPVSIAPYTVDVIPANIKNEVQVSLAEK 490

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
               L    I A +     +  G + K AD    P  I+ G      G++++K    G+ 
Sbjct: 491 IYNELEEEKIDAMLD-DRDEKPGFKFKDADLIGFPFKIVVGKR-ADEGIVELKIRRTGE- 547

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                             + I  +E+++ +K++++
Sbjct: 548 -----------------TLEISQNEVIAKIKELMK 565


>gi|77918296|ref|YP_356111.1| prolyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|114152225|sp|Q3A6R6|SYP_PELCD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77544379|gb|ABA87941.1| prolyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 571

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R   ++   +R   +  G   +  P++  S+ L +     +  
Sbjct: 31  MIRKLAAGIYNYLPFGLRSIRKVEQIVREEMDRAGAMELLMPMVVPSE-LWEESGRWEHY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +    D       L         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRFTDRKDASFCLGPTHEEVITDLVRNTVRSYRQLPLNLYQIQGKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F        D   + A+ A  +M        E  G+K
Sbjct: 150 MRGREFIMKDAYSFDIDEAGADVAYEKMYQAYRRIFERCGLK 191



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 35/106 (33%), Gaps = 1/106 (0%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I     ++        + L+  +     L+  G+   +     +  G++ K AD  
Sbjct: 463 FPMPIAPFHVLVTVVNPRQEEVLAAAENLYAELQALGVEVLLDDRDER-PGSKFKDADLI 521

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             PL +  G        +++++ A G+     +    +     V +
Sbjct: 522 GIPLRLTVGARGLKENAVELQERAGGERRMLPLAEAAALVRDMVVE 567


>gi|321475416|gb|EFX86379.1| hypothetical protein DAPPUDRAFT_313217 [Daphnia pulex]
          Length = 1575

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 67/477 (14%), Positives = 144/477 (30%), Gaps = 57/477 (11%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
              I   + +      +  G    +TP      +L       ++    V  L +  G  ++
Sbjct: 975  AWIFQAVQEVFVKHCQRRGAIYFKTP------TLSPKKGQPNQGFSQVL-LMNHAGSIVT 1027

Query: 83   LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            L  DL  P AR+++ +  T +       +    +     P  F +     V    SS   
Sbjct: 1028 LPTDLQTPFARFISRSNLTWLKRYCIDYVYSERKLVGLHPKSFPELAFDIVTPSPSSVLA 1087

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +  +     +          + + +  +L  +L   G+  D +     I+      
Sbjct: 1088 DAEVLVTISDVFSDQRLKIERKITLELGHHLLLKAVLIHCGIPEDKRSELCHILKTRSKS 1147

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
              +   +  KL +     D   +  +     ++    + + +S   E             
Sbjct: 1148 EGQIQNKTAKLAISRQSIDMLLNLLELEGSVAKVTAALTNLISRKGE-----------AA 1196

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
               ++  +EL  ++      G  +       T ++         +  +  F   +  +K 
Sbjct: 1197 SLAKQALHELDAVATHAECMGLRNTYSIRIDTALQNYT----THWGMVFRFVCRSNLRKT 1252

Query: 323  VVFGSVGGGGRYD-------------GLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
             +   +  GGRYD               V           G  I + R+   LK  E   
Sbjct: 1253 KIDDVLATGGRYDALVRSFQNALVNRKKVDGEPMSQPTVVGGLIHLDRVAAILKETEVVE 1312

Query: 370  NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
              +  +  V I T+ +   +  +     + L   G+RA +          Q+ +   +N 
Sbjct: 1313 ERV--LVYVAICTVGYRPQTKEQA-SLVKDLWNNGVRATVLDHCQSLDEAQI-WCREKNV 1368

Query: 430  PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
            P  +I    E   G  ++K                +W + R  +  + + EL+  +K
Sbjct: 1369 PHIVILKDSEV--GSARLK----------------TWEKDRYTERKMMLGELIDVLK 1407


>gi|294784787|ref|ZP_06750075.1| proline--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486501|gb|EFG33863.1| proline--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 567

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + +R   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GPEMLRLKDRHERDFVLSPTQEEMITAIVRSDISSYKSLP--INLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFTMKDAYSFH 164



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/335 (11%), Positives = 103/335 (30%), Gaps = 34/335 (10%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +   ++ + + + +  +  +          D++    ++G    + E +  N  + 
Sbjct: 254 VHTPDCPTIESLAKYLDVPLERTVKALTYKDMGTDEIYLVLIRG-DFEVNEVKLKNILNA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMATDEEIEKLGLKKGYIGPYKLPTKIKIVAD-LSVPEISNHIVGSHQKDYHYKNVN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG---GGGRYDGLVSR 340
           Y  +        +R  +    C+    L      E  +    G          Y     +
Sbjct: 372 YGRDYTADIVADIRTAKVGENCIIGGKLHSARGIECGQIFKLGDKYSKVMNATYLDENGK 431

Query: 341 FKGQNVPATGFSIGISRLIVALKSLE-----SSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            +   +   G  +    +  A++            +I      +I     +   +S  + 
Sbjct: 432 TQYMLMGCYGIGV-TRTMAAAIEQNNDENGIIWPVSIAPYTVDVIPANIKNEVQVSLAEK 490

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
               L    I A +     +  G + K AD    P  I+ G      G++++K    G+ 
Sbjct: 491 IYNELEEEKIDAMLD-DRDEKPGFKFKDADLIGFPFKIVVGKR-ADEGIVELKIRRTGE- 547

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                             + +P +E+++ +K++++
Sbjct: 548 -----------------TLELPQNEIIAKIKELMK 565


>gi|256846083|ref|ZP_05551541.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719642|gb|EEU33197.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 567

 Score = 67.9 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + +R   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GPEMLRLKDRHERDFVLSPTQEEMITAIVRSDISSYKSLP--INLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFTMKDAYSFH 164



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/335 (10%), Positives = 103/335 (30%), Gaps = 34/335 (10%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +   ++ + + + +  +  +          D++    ++G    + E +  N  + 
Sbjct: 254 VHTPDCPTIESLAKYLDVPLERTVKALTYKDMGTDEIYMVLIRG-DFEVNEVKLKNILNA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMATDEEIEKLGLKKGYIGPYKLPAKIKIVAD-LSVPEISNHIVGSHQKDYHYKNVN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG---GGGRYDGLVSR 340
           Y  +      T +R  +    C+    L      E  +    G          Y     +
Sbjct: 372 YGRDYTADIVTDIRTAKVGENCITGGKLYSARGIECGQIFKLGDKYSKAMNATYLDENGK 431

Query: 341 FKGQNVPATGFSIGISRLIVALKSLE-----SSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            +   +   G  +    +  A++            +I      +I     +   +S  + 
Sbjct: 432 TQYMLMGCYGIGV-TRTMAAAIEQNNDENGIIWPVSIAPYTVDVIPANIKNEVQVSLAEK 490

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
               L    I   +     +  G + K AD    P  ++ G      G++++K    G+ 
Sbjct: 491 IYNELEEEKIDTMLD-DRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVELKIRRTGE- 547

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                             + +P +E+++ +K++++
Sbjct: 548 -----------------TLELPQNEIIAKIKELMK 565


>gi|284030961|ref|YP_003380892.1| prolyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283810254|gb|ADB32093.1| prolyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 587

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 1/103 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +     +++  +K       L + G+          + G + K
Sbjct: 478 DELGLIWPREITPADVHLVATGKETEVFAKAAELATELESRGLTVLYDDREKVSPGVKFK 537

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+    P   + G G  + G +++KD   G      +     
Sbjct: 538 DAELLGIPTIAVVGKG-LADGTIEVKDRRSGDRTDVAVTEVVD 579



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 21/76 (27%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
               G        +R+   +   +R   +  G   +  P L   +               
Sbjct: 36  RTAPGMYTWLPLGLRVLRNVEKIVREEMDAIGAQELVFPALLPREPYEA-TGRWTEYGPN 94

Query: 70  VFSLQDDDGQWISLRY 85
           +F L+D  G  + L  
Sbjct: 95  LFRLKDRKGADMLLGP 110


>gi|258516344|ref|YP_003192566.1| prolyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780049|gb|ACV63943.1| prolyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 572

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ ++I   +R   +  G   I  P+++ ++ L +     D     +F L
Sbjct: 38  GVYTYLPLAQRVLSKIKRIVREEMDRQGGQEILMPIMQPAE-LWQESGRWDVYGPELFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+  +L  
Sbjct: 97  KDRHGRDFALGP 108


>gi|281357061|ref|ZP_06243551.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316619|gb|EFB00643.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 591

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 36/95 (37%), Gaps = 1/95 (1%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +              + LR  G R E+ + ++ + G ++K A +   P  ++ G  E +
Sbjct: 498 ILPVSDRQHDAAMALKKELRLKGFRVEVDVKAA-SLGAKIKDARKERIPYMLVVGEREAA 556

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            G + +++  +G+  +  +          V    I
Sbjct: 557 DGTMAVRNRREGELGTMTLDQLVEKMRFEVDNKII 591


>gi|257126007|ref|YP_003164121.1| tRNA synthetase class II (G H P and S) [Leptotrichia buccalis
           C-1013-b]
 gi|257049946|gb|ACV39130.1| tRNA synthetase class II (G H P and S) [Leptotrichia buccalis
           C-1013-b]
          Length = 377

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 117/314 (37%), Gaps = 11/314 (3%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           +  ++ +L +IR +Y++YG+  I  P  E  D    +  ++D  ++ V ++   +G+ ++
Sbjct: 8   MSKKDLVLLNIRKMYDSYGYKKISLPSFEEYDL---YNENKDFIDRNVLTVMSPNGKLLA 64

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           LR D+T  +A+ V+                  ++   +   ++  + + +   +    + 
Sbjct: 65  LRPDITLSVAKKVS-------KDQSLKYSKIYYQENTYNLTKYVGYEEDEQLGIELIGKE 117

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
           +      ++   ++++ I      I +++   +  I E   L  + K      + R    
Sbjct: 118 STFLDFEIINLAVKSLDIINKKSMIVLSHAGFISSIFENFDLEYEVKEQIFDCINRKNSH 177

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
             +  L+  K +    +           NL + + +++   ++ + +K + EL +L    
Sbjct: 178 DIEKILENNKNVSENVKKLIYKIPELSGNLENIEKELLKYEINENTKKILFELKQLNNLL 237

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
           +   K    ++    +V+   Y +  I             TG  Y+ +     ++     
Sbjct: 238 LKFHKKSK-IIFDFSIVKNLNYYNGIILQGYIEDFPNVILTGGRYDKLFEKFGVDTGAVG 296

Query: 323 VVFGSVGGGGRYDG 336
               + G  G Y  
Sbjct: 297 FAILTDGLKGYYKD 310


>gi|167036776|ref|YP_001664354.1| prolyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115198|ref|YP_004185357.1| prolyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|226701349|sp|B0KCH5|SYP_THEP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166855610|gb|ABY94018.1| prolyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928289|gb|ADV78974.1| prolyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 570

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R +L  G         R+  ++   +R   +  G   +    L  ++ L K  
Sbjct: 26  MLKAALMR-KLASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELL-KES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +F L+D + +   L  
Sbjct: 84  GRWDVFGPEMFKLKDRNERDFCLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V+I  ++  +++ ++  +     L+  GI   +     +  G + 
Sbjct: 459 DEKGIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRA-GVKF 517

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             AD    P+ I  G      G+++IK L + +E                    + IS++
Sbjct: 518 NDADLLGIPIRITVGKK-VDDGIVEIK-LRENEEAE-----------------EVKISDV 558

Query: 482 VSTVKKILQEN 492
           V  VK I++E 
Sbjct: 559 VEKVKNIIKEK 569


>gi|116328741|ref|YP_798461.1| threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331652|ref|YP_801370.1| threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280605|sp|Q04R58|SYT_LEPBJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122283474|sp|Q04ZG7|SYT_LEPBL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116121485|gb|ABJ79528.1| Threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125341|gb|ABJ76612.1| Threonine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 639

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 2/90 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K   + N + D +R      G+  I+TP +  S+ L K     D  ++ ++  
Sbjct: 265 GFPFWHPKGTILWNSLADYLRAECNKRGYQEIKTPAVLSSE-LWKKSGHWDNFHENMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIV 103
            D D +  +L+       +     +  +  
Sbjct: 323 TDIDEEDYALKPMNCPGCSLIYKHHLHSYR 352



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 75/243 (30%), Gaps = 8/243 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +    +L SE  DI+    ++  +    E    +       +G +E    +    
Sbjct: 385 DDSHIYAPLEHLESEVTDIIDFTFTVYKKFGFSEFKTFIATRPEKSQGRDEDWEFATNTL 444

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV-- 338
           K       I        G  Y     +        + +     V  S+      D     
Sbjct: 445 KQSLEKKGIPYGIKEGEGAFYGPKIEFNIKDSIGRLWQCGTIQVDFSMPERFELDYTDSD 504

Query: 339 -SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    +      + + ++  E           + I T+          +   
Sbjct: 505 GQKKRPVMIHRAIYGSLERFIGILIEHYEGKFPLWISPNQIRILTI--TEKVAEYAKDVY 562

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L  AG R E+    ++  G +++ +  +     +I G  E   G L ++   +G+E +
Sbjct: 563 CELVDAGFRVELD-TRNEKIGAKIRDSILKKANYLLILGEKEMESGTLAVR--KRGQEDT 619

Query: 458 REI 460
           + +
Sbjct: 620 KTL 622


>gi|84515335|ref|ZP_01002697.1| prolyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510618|gb|EAQ07073.1| prolyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 446

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/458 (10%), Positives = 121/458 (26%), Gaps = 63/458 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I + +    E  G   I+ P ++ +D L +     D  
Sbjct: 31  MIKQASAGIYSWLPLGFKVLRKIENIVHQEQERAGHIAIQMPTIQSAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  ++D  G+ +       +L   + R    ++  +      Y+I   FR+E     
Sbjct: 90  GEEMLRIKDRGGREMLFTPTAEELVTDIFRAHVTSYKDLP--LTLYQIQWKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFYM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A+    ++      
Sbjct: 180 SYLRTYERMGLQAI------------PMRADSGPIGGDDTHEFLVLADTGESEVFYDSQI 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
             +       +  +        ++  +      E    + +N    +      RG+E   
Sbjct: 228 TDLKFGDRQIDYSDHAACAAVLDEFTSRYARTDETHDAALFNQVP-EERRRTARGIEVGQ 286

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +                  G++   G+   +        +  +     I        
Sbjct: 287 IFYFGTKYSD----------AMGALVDDGKGGKVPVHMGSHGIGVSRLLGAIIEASH--D 334

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFGNQL 421
                           I  +   D+++ +  Q     L   G+  E ++    +  G + 
Sbjct: 335 DKGIIWPEGVTPFHCGIVNLKQGDAEADAACQALYDSLTALGL--EPLYDDRDERAGTKF 392

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
              D    P  I  G      G++++     G+     
Sbjct: 393 GTMDMIGLPWRITVGPRGLKNGVVELTSRRTGESEELP 430


>gi|294508832|ref|YP_003572891.1| threonyl-tRNA synthetase, class IIa [Salinibacter ruber M8]
 gi|294345161|emb|CBH25939.1| threonyl-tRNA synthetase, class IIa [Salinibacter ruber M8]
          Length = 656

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 3/129 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D    R +   +    F      + V ++    +         V I  +    D +   Q
Sbjct: 518 DEHDERKRPVMIHRAPFGSLERFIGVLIEHCGGNFPTWLAPTQVQIIPVG--DDFVDYAQ 575

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                LR   +R E+   S +  G +++ A+ +  P  ++ G  E   G + ++  A G 
Sbjct: 576 EVAATLRAEDVRVEID-TSDETVGYKIREAETQKVPYMLVVGGDEEEAGTVSVRSHADGP 634

Query: 455 ELSREIKNN 463
           + +  +++ 
Sbjct: 635 QGTVSVQDF 643


>gi|269940754|emb|CBI49136.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
          Length = 567

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 67/541 (12%), Positives = 143/541 (26%), Gaps = 80/541 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+ L  +   G         R+ N I   +R   E      I  P L+ ++ L +     
Sbjct: 28  KSGLIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-------- 112
                 +  LQD  G+  +L     +L   + R   +++  +       +          
Sbjct: 87  GAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPR 146

Query: 113 ---------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA----- 152
                              +E      ++   Q            A   +    A     
Sbjct: 147 FGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSH 206

Query: 153 -DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------RA 199
                A+     D  +          I +   ++  +  +  +  L              
Sbjct: 207 THEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQEL 266

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELYE 257
            D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+  
Sbjct: 267 ADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIVN 324

Query: 258 LVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           LV               +   +  V     +           I+  + R         + 
Sbjct: 325 LVGANPGSLGPVIDKEIKIYADNFVQDLINLVVGANEDGYHLINVNVGRDFNVDEYGDFR 384

Query: 309 AILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIGI 355
            IL    +++      F            G +Y   ++     N           + IGI
Sbjct: 385 FILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGI 444

Query: 356 SRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           SR + A+              ++      LI+      D                    +
Sbjct: 445 SRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV-L 502

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    +  G +   AD    PL I+ G    S G++++K+   G      I +  +    
Sbjct: 503 YDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561

Query: 470 R 470
           +
Sbjct: 562 K 562


>gi|227874914|ref|ZP_03993066.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269976484|ref|ZP_06183469.1| prolyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|306818238|ref|ZP_07451968.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307701739|ref|ZP_07638753.1| proline--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227844491|gb|EEJ54648.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269935285|gb|EEZ91834.1| prolyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|304648977|gb|EFM46272.1| proline--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307612997|gb|EFN92252.1| proline--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 633

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 1/103 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +     D    +  +   + L  AGI       +  + G + K
Sbjct: 488 DDKGLVWPVNVAPFQVHVLATGKDPQVFAAAEKLARELEAAGIPVLYDDRAKASAGVKFK 547

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+    P  ++ G G  + G ++I+D   G  L   ++    
Sbjct: 548 DAELMGMPYLLVVGKG-LANGTVEIRDRRAGNTLDCTVEAAVE 589



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+   I + +R   +  G   ++ P+L   E  ++  +     +     +
Sbjct: 40  GIYTWLPLGLRVLRNIENVVREEMDRIGGQELQFPVLLPREPYEATNR----WEEFGSSL 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G    L  
Sbjct: 96  FKLQDRKGGDYLLGP 110


>gi|162148795|ref|YP_001603256.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161787372|emb|CAP56967.1| Prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 476

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 52/462 (11%), Positives = 107/462 (23%), Gaps = 74/462 (16%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+   I   +R   +  G   +  P ++ ++ L K     D     
Sbjct: 72  QTAAGIYAWLPAGWRVLQNIARIVREEQDAIGAQELLMPTVQSAE-LWKRSGRYDAYGPE 130

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  +QD   + +                                             + I
Sbjct: 131 MLRIQDRHEREL--------------------------------------LYGPTNEEMI 152

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                 V  S       +  +     + V  +           K             D  
Sbjct: 153 TDLFGQVVKSYRELPQVLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDYASAVDSY 212

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS---------EQIDIM 240
               L  LR   +L    +  +    G    + S +F   A             E+ D +
Sbjct: 213 RRMMLAYLRTFQRLGVRAI-PMVADTGPIGGELSHEFLILAPTGESGVFFDGAFEEQDWL 271

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              + ID  +S+   +  +    A     ++       V        R      I     
Sbjct: 272 SDPVDIDDRESLDAFFTRMTSFYAATDEKHD-EAAWADVPAERRREGRGIEVGHIFHFGR 330

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
            YT  +    +     +        GS G G             +     +   ++    
Sbjct: 331 KYTESM---DITVSGPDGAPLYPEMGSYGIGVSRLVAAIIEASHDDNGIIWPDSVAPFRA 387

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           A+ +L++       +   +                             ++    +  G +
Sbjct: 388 AILNLKTGDAACDAICEQVYAAAPESF---------------------LYDDRGERAGVK 426

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              AD    P  +I G      G +++K  A G      + +
Sbjct: 427 FADADLMGHPWQVIVGPRGAKEGKVELKRRADGARFELSVDD 468


>gi|307266366|ref|ZP_07547904.1| prolyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918602|gb|EFN48838.1| prolyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 570

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R +L  G         R+  ++   +R   +  G   +    L  ++ L K  
Sbjct: 26  MLKAALMR-KLASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELL-KES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +F L+D + +   L  
Sbjct: 84  GRWDVFGPEMFKLKDRNERDFCLGP 108



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V+I  ++  +++ ++  +     L+  GI   +     +  G + 
Sbjct: 459 DEKGIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRA-GVKF 517

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             AD    P+ I  G      G+++IK L + +E                    + IS++
Sbjct: 518 NDADLLGIPIRITVGKK-VDDGIVEIK-LREKEEAE-----------------EVKISDV 558

Query: 482 VSTVKKILQEN 492
           V  VK I++E 
Sbjct: 559 VEKVKNIIKEK 569


>gi|220924023|ref|YP_002499325.1| prolyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|254782908|sp|B8IUW4|SYP_METNO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219948630|gb|ACL59022.1| prolyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 443

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 49/464 (10%), Positives = 114/464 (24%), Gaps = 55/464 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+ NR+ + IR   +  G   +  P ++ ++ L +     +  
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLNRVTEVIRAEQDRSGAIELLMPTIQSAE-LWRESGRYEAY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +            LR                          I      E        
Sbjct: 90  GKEM------------LR--------------------------IRDRHEREMLFGPTNE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + I     +   S +     +  +     + V  +           K             
Sbjct: 112 EMITAIFRSAVRSYKDLPKNLYHIQWKFRDEVRPRFGTMRSREFLMKDAYSFDLDEAGAR 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  +  LR   +L    +  ++   G    + S +F   A     ++    ++L  
Sbjct: 172 HAYNKMFVAYLRTFARLGLKAI-PMRAETGPIGGNLSHEFIILAQTGESEVFCDRAYLGF 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            +  +  +  + V    A    +      +  + +        + +    RG+E      
Sbjct: 231 PIPPASIDFDD-VAALQATVDHWTSRYAATSEMHEPAAFEAVPEEARMAARGIEVGHIFY 289

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +      P+      P         G Y                  +  + +  +     
Sbjct: 290 FGTKYSEPMGARVTGPDGQERPVHMGSY------------GIGPSRLVAAIIEASHDEAG 337

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               +      V +  +     +         + L  AG+         +  G +   AD
Sbjct: 338 IVWPDSVAPFDVALLNLKVGDAATDAACAKLQEELEAAGLTVLTDDRDER-PGAKFATAD 396

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               P  +I G    + G +++K  A G+     +         
Sbjct: 397 LIGLPWQVIVGPKGLAEGTIELKRRATGEREIVAVDAVAPRLRG 440


>gi|94265181|ref|ZP_01288943.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
 gi|93454322|gb|EAT04629.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
          Length = 572

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +    ++ + +R      G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLTSGVYSYLPLGLAAIRKVEEIVRQEMNRAGAQELLLPMVQPAD-LWRESGRWEKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +   QD   +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFQDRHQRESCLGPTHEEVITDLVRLNVHSYRDLPLNLYQIQTK 138



 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 1/113 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +L+     D +  ++ Q   Q L  AG+   +   + +  G + K AD 
Sbjct: 461 IFPLPIAPFQVILLNLTPKDPEISAEAQRLYQELTAAGLEVLLDDRNER-PGAKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
              P+ ++ G      G+L+I++ A G+          +     VAQ   P S
Sbjct: 520 IGIPIRLMVGKRFAQEGLLEIRNRADGRSSEATPAAAVAVITEMVAQQLPPQS 572


>gi|94267977|ref|ZP_01291052.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
 gi|93451782|gb|EAT02540.1| Prolyl-tRNA synthetase [delta proteobacterium MLMS-1]
          Length = 572

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +    ++ + +R      G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLTSGVYSYLPLGLAAIRKVEEIVRQEMNRAGAQELLLPMVQPAD-LWRESGRWEKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +   QD   +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFQDRHQRESCLGPTHEEVITDLVRLNVHSYRDLPLNLYQIQTK 138



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 1/113 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +L+     D +  ++ Q   + L  AG+   +   + +  G + K AD 
Sbjct: 461 IFPLPIAPFQVILLNLTPKDPEISAEAQRLYRELTAAGLEVLLDDRNER-PGAKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
              P+ ++ G      G+L+I++ A G+          +     VAQ   P S
Sbjct: 520 IGIPIRLMVGKRFAQEGLLEIRNRADGRSSEATPAAAVAVITEMVAQQLPPQS 572


>gi|315186787|gb|EFU20545.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Spirochaeta
           thermophila DSM 6578]
          Length = 578

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 45/104 (43%), Gaps = 3/104 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          Q   + LR AG+RAE  L + +    +++ A +   P A+
Sbjct: 475 WLAPVQVVVIPVSDVFAGYAQEVVRALREAGVRAEADLSADR-MNAKIRKAQQEKIPYAV 533

Query: 434 IQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQITI 476
           I G  E+    + ++ +  G++ +   + +       RV + ++
Sbjct: 534 IVGQREQEGRTVSVR-VRGGEQRNGVALGDFVEDVARRVHERSL 576


>gi|169621989|ref|XP_001804404.1| hypothetical protein SNOG_14207 [Phaeosphaeria nodorum SN15]
 gi|111057324|gb|EAT78444.1| hypothetical protein SNOG_14207 [Phaeosphaeria nodorum SN15]
          Length = 542

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 50/444 (11%), Positives = 106/444 (23%), Gaps = 47/444 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  ++   +R  Y  +GF  + TP++ Y  SL +     +   + +FS+
Sbjct: 91  GSPLILPNGAYVFQKLQSFLRAQYPQFGFQEVITPII-YKKSLWEKSGHWENYAEDMFSV 149

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q                                 T +       E    G          
Sbjct: 150 QGRG-----------------------------ATGQTEKAQVGEDEEFGLKPMNCPGHC 180

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                  ++           +                 R+                    
Sbjct: 181 LLFRDEIKSYRDLPIRYADFSALHRNEVSGSLTGLTRVRRFHQDDAHIFCRPDQILPEIE 240

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
             +       + FGL   KLLL     D+     +  +   +Q+   +  +  +   +  
Sbjct: 241 QTLKFVGMVYNTFGLGPYKLLLSTRPKDSFIGTIEEWDRAEKQLSTALDSIGSEWAINEG 300

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG-----LEYYTGCVYE 308
           +            K  N     +  ++       R  +             +       +
Sbjct: 301 DGAFYGPKIDIILKDSNGKEHQTATIQLDFQLPQRFDLQYQASPEELEAGTQTTMDTGLD 360

Query: 309 AILGFPVMNEKQKPVVFGSVGGG--GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
             L  PVM  +                Y G    +     PAT  S+     + A     
Sbjct: 361 PSLRRPVMIHRAIYGSIERFMALLIEHYAGKYPFWL-SPRPATILSLNSDANVQAHIERV 419

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +  +  +      T        L    ++        I  ++   S ++ G ++  A  
Sbjct: 420 KAVLSGLQPHDAPSTASSSSPKPLPLSTIHLP------IDVDI---SDRSLGKKVAEARS 470

Query: 427 RNCPLAIIQGTGERSRGMLQIKDL 450
           +     I+ G  E     + +K +
Sbjct: 471 KKYNHMIVVGGKEAENDAVNLKVM 494


>gi|258452562|ref|ZP_05700568.1| prolyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257859780|gb|EEV82622.1| prolyl-tRNA synthetase [Staphylococcus aureus A5948]
          Length = 567

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 67/541 (12%), Positives = 143/541 (26%), Gaps = 80/541 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+ L  +   G         R+ N I   +R   E      I  P L+ ++ L +     
Sbjct: 28  KSGLIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG-------- 112
                 +  LQD  G+  +L     +L   + R   +++  +       +          
Sbjct: 87  GAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPR 146

Query: 113 ---------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA----- 152
                              +E      ++   Q            A   +    A     
Sbjct: 147 FGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSH 206

Query: 153 -DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------RA 199
                A+     D  +          I +   ++  +  +  +  L              
Sbjct: 207 THEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQEL 266

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELYE 257
            D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+  
Sbjct: 267 ADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIVN 324

Query: 258 LVKGT---------IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           LV               +   +  V     +           I+  + R         + 
Sbjct: 325 LVGANSGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFR 384

Query: 309 AILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIGI 355
            IL    +++      F            G +Y   ++     N           + IGI
Sbjct: 385 FILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGI 444

Query: 356 SRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           SR + A+              ++      LI+      D                    +
Sbjct: 445 SRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV-L 502

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    +  G +   AD    PL I+ G    S G++++K+   G      I +  +    
Sbjct: 503 YDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITN 561

Query: 470 R 470
           +
Sbjct: 562 K 562


>gi|49483426|ref|YP_040650.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425317|ref|ZP_05601742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427978|ref|ZP_05604376.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430611|ref|ZP_05606993.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433371|ref|ZP_05609729.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436213|ref|ZP_05612260.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282905581|ref|ZP_06313436.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908556|ref|ZP_06316386.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910835|ref|ZP_06318638.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914040|ref|ZP_06321827.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918962|ref|ZP_06326697.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282924085|ref|ZP_06331761.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283958006|ref|ZP_06375457.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293501072|ref|ZP_06666923.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510034|ref|ZP_06668742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293526620|ref|ZP_06671305.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427750|ref|ZP_06820382.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591292|ref|ZP_06949930.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|81175023|sp|Q6GHH2|SYP_STAAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49241555|emb|CAG40241.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257271774|gb|EEV03912.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274819|gb|EEV06306.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278739|gb|EEV09358.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281464|gb|EEV11601.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284495|gb|EEV14615.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282314057|gb|EFB44449.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282316772|gb|EFB47146.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282322108|gb|EFB52432.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325440|gb|EFB55749.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327618|gb|EFB57901.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330873|gb|EFB60387.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|283790155|gb|EFC28972.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920692|gb|EFD97755.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096077|gb|EFE26338.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466978|gb|EFF09496.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|295128108|gb|EFG57742.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576178|gb|EFH94894.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438357|gb|ADQ77428.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315194151|gb|EFU24544.1| prolyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 567

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 65/542 (11%), Positives = 142/542 (26%), Gaps = 81/542 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E      I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  LQD  G+  +L     +L   + R   +++  +       +         
Sbjct: 86  WGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E      ++   Q            A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGS 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------R 198
                 A+     D  +          I +   ++  +  +  +  +             
Sbjct: 206 HTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPIEKIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELY 256
             D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+ 
Sbjct: 266 LADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           I+  + R         +
Sbjct: 324 NLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIG 354
             IL    +++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+              ++      LI+      D                    
Sbjct: 444 ISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV- 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    PL I+ G    S G++++K+   G      I +  +   
Sbjct: 502 LYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVIT 560

Query: 469 AR 470
            +
Sbjct: 561 NK 562


>gi|257076511|ref|ZP_05570872.1| threonyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 668

 Score = 67.6 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/441 (9%), Positives = 113/441 (25%), Gaps = 49/441 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IRN +++ ++ + E  G++ + T    + D + K      +    +F  
Sbjct: 252 GMPFYAPNGAIIRNELINYMKELNEKSGWEEVWTAHA-FKDIIWKQSGHYYKYKDDMFLF 310

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              +G    L+             +         +YR  PV  +E     R+ +  +   
Sbjct: 311 TLPNGDNYGLKPMNCPG-------HIAIFQRSVYSYRDMPVKYSEAGTVYRYEKSGEMGG 363

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D    +      +                   + I   + +         
Sbjct: 364 LTRPRGFTIDDGHGFVREDQIFDETISLLKIIPSIFKTILGTEEITYDLSVMDKQHPENY 423

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+        +KF    ++    E +    G     ++ +          +  +  +++ 
Sbjct: 424 LMSYECSSCGEKFM---LRAASQEYKCPACGSENLNSDFS----------MWDNATENLR 470

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
              E +K       G                    + I   + R  +  T          
Sbjct: 471 RALEELKLKYTEYPGEA----------AFYGPKIDVHIKDALGRLWQLST---------- 510

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  +   P  F           +      + +    +      + + L+          
Sbjct: 511 -IQIDFFMPANFDLYYIDKNDTKVRPVIIHRAI----YGSYERFIAILLEHFNGKLPLW- 564

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+    +              + LR  GIR+++ + S      ++K          +
Sbjct: 565 -LTPLQAYIIPVSEAYNEYATEINKKLREKGIRSKVDI-SDGTISKKIKLIRTMRPSYIL 622

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E +   + +++     
Sbjct: 623 VVGEKELANNSVSVRNRKDKT 643


>gi|326391122|ref|ZP_08212668.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992821|gb|EGD51267.1| prolyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 570

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R +L  G         R+  ++   +R   +  G   +    L  ++ L K  
Sbjct: 26  MLKAALMR-KLASGVYIYLPLGQRVLRKVEQIVREEMDRAGSQEVLMSALIPAELL-KES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +F L+D + +   L  
Sbjct: 84  GRWDVFGPEMFKLKDRNERDFCLGP 108



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V+I  ++  +++ ++  +     L+  GI   +     +  G + 
Sbjct: 459 DEKGIIWPMSVAPYHVIIVPVNVSNEAQNRVAEDIYAALQKEGIEVLIDDRDLRA-GVKF 517

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             AD    P+ I  G      G+++IK L + +E                    + IS++
Sbjct: 518 NDADLLGIPIRITVGKK-VDDGIVEIK-LREKEEAE-----------------EVKISDV 558

Query: 482 VSTVKKILQEN 492
           V  VK I++E 
Sbjct: 559 VEKVKNIIKEK 569


>gi|169347105|ref|ZP_02866047.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169296788|gb|EDS78917.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 643

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/275 (9%), Positives = 69/275 (25%), Gaps = 16/275 (5%)

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D       + ++    +   D      +   +  +       +   + EK +++      
Sbjct: 384 DGHIVCTPEQLEDEF-KNTVDLVKYVMETLGIADDITYRFSKWDPNNTEKYINDPEAWEN 442

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                 +  N L +                         +  T    +            
Sbjct: 443 TQNIMREILNHLNIDFTEADDEAAFYGPKLDIQFKNVHGKEDTIITIQIDF--------- 493

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                    G    D    + +   +  +        L + ++    +      + PV  
Sbjct: 494 ---ALAERFGMYYIDKDGEKKRPYIIHRSSIGCYERTLAMLIEKYAGALPTW--IAPVQA 548

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +              + LR  G+R E    + K  G +++ A     P  ++ G  E 
Sbjct: 549 KVLPLSDKYADYANEVVEELRRRGVRVEADHRAEK-IGYKIREARLERTPYILVVGEKEA 607

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               + ++    G+E +  + +  +     +A   
Sbjct: 608 ENKEVSVRSRKNGEEGAMPLADFVNRIVLEIANRE 642



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 63/222 (28%), Gaps = 10/222 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RI   +   I +  +  G+   +TPL+  SD   K     D    G+F L
Sbjct: 260 GLPLLMPKGARIIQTLQRWIEDEEQRRGYVLTKTPLMAKSDLY-KISGHWDHYKDGMFVL 318

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
            D   D +  +LR  +T P        +        +YR  PV   E     R     + 
Sbjct: 319 GDEEKDSEVFALRP-MTCPF------QYAIYNSTQHSYRDLPVRFAETSTLFRNESSGEM 371

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      AD  +        +      +     +    I D I  +      +   
Sbjct: 372 HGLIRVRQFTLADGHIVCTPEQLEDEFKNTVDLVKYVMETLGIADDITYRFSKWDPNNTE 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +    A +       + +  L  +    +      G  L 
Sbjct: 432 KYINDPEAWENTQNIMREILNHLNIDFTEADDEAAFYGPKLD 473


>gi|18311304|ref|NP_563238.1| threonyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|110801319|ref|YP_697012.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168205151|ref|ZP_02631156.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168210374|ref|ZP_02635999.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|168213233|ref|ZP_02638858.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168216713|ref|ZP_02642338.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182625789|ref|ZP_02953556.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|22654117|sp|Q8XI02|SYT_CLOPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123148532|sp|Q0TMX8|SYT_CLOP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|18145987|dbj|BAB82028.1| threonine-tRNA ligase [Clostridium perfringens str. 13]
 gi|110675966|gb|ABG84953.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170663286|gb|EDT15969.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170711530|gb|EDT23712.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170715283|gb|EDT27465.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177908945|gb|EDT71432.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182381219|gb|EDT78698.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 643

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/275 (9%), Positives = 69/275 (25%), Gaps = 16/275 (5%)

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D       + ++    +   D      +   +  +       +   + EK +++      
Sbjct: 384 DGHIVCTPEQLEDEF-KNTVDLVKYVMETLGIADDITYRFSKWDPNNTEKYINDPEAWEN 442

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                 +  N L +                         +  T    +            
Sbjct: 443 TQNIMREILNHLNIDFTEADDEAAFYGPKLDIQFKNVHGKEDTIITIQIDF--------- 493

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                    G    D    + +   +  +        L + ++    +      + PV  
Sbjct: 494 ---ALAERFGMYYIDKDGEKKRPYIIHRSSIGCYERTLAMLIEKYAGALPTW--IAPVQA 548

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +              + LR  G+R E    + K  G +++ A     P  ++ G  E 
Sbjct: 549 KVLPLSDKYADYANEVVEELRRRGVRVEADHRAEK-IGYKIREARLERTPYILVVGEKEA 607

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               + ++    G+E +  + +  +     +A   
Sbjct: 608 ENKEVSVRSRKNGEEGAMPLADFVNRIVLEIANRE 642



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 63/222 (28%), Gaps = 10/222 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RI   +   I +  +  G+   +TPL+  SD   K     D    G+F L
Sbjct: 260 GLPLLMPKGARIIQTLQRWIEDEEQRRGYVLTKTPLMAKSDLY-KISGHWDHYKDGMFVL 318

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
            D   D +  +LR  +T P        +        +YR  PV   E     R     + 
Sbjct: 319 GDEEKDSEVFALRP-MTCPF------QYAIYNSTQHSYRDLPVRFAETSTLFRNESSGEM 371

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      AD  +        +      +     +    I D I  +      +   
Sbjct: 372 HGLIRVRQFTLADGHIVCTPEQLEDEFKNTVDLVKYVMETLGIADDITYRFSKWDPNNTE 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +    A +       + +  L  +    +      G  L 
Sbjct: 432 KYINDPEAWENTQNIMREILNHLNIDFTEADDEAAFYGPKLD 473


>gi|110802298|ref|YP_699583.1| threonyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123047184|sp|Q0SQM4|SYT_CLOPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110682799|gb|ABG86169.1| threonine--tRNA ligase [Clostridium perfringens SM101]
          Length = 643

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/275 (9%), Positives = 69/275 (25%), Gaps = 16/275 (5%)

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D       + ++    +   D      +   +  +       +   + EK +++      
Sbjct: 384 DGHIVCTPEQLEDEF-KNTVDLVKYVMETLGIADDITYRFSKWDPNNTEKYINDPEAWEN 442

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                 +  N L +                         +  T    +            
Sbjct: 443 TQNIMREILNHLNIDFTEADDEAAFYGPKLDIQFKNVHGKEDTIITIQIDF--------- 493

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                    G    D    + +   +  +        L + ++    +      + PV  
Sbjct: 494 ---ALAERFGMYYIDKDGEKKRPYIIHRSSIGCYERTLAMLIEKYAGALPTW--IAPVQA 548

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +              + LR  G+R E    + K  G +++ A     P  ++ G  E 
Sbjct: 549 KVLPLSDKYADYANEVVEELRRRGVRVEADHRAEK-IGYKIREARLERTPYILVVGEKEA 607

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               + ++    G+E +  + +  +     +A   
Sbjct: 608 ENKEVSVRSRKNGEEGAMPLADFVNRIVLEIANRE 642



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 63/222 (28%), Gaps = 10/222 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RI   +   I +  +  G+   +TPL+  SD   K     D    G+F L
Sbjct: 260 GLPLLMPKGARIIQTLQRWIEDEEQRRGYVLTKTPLMAKSDLY-KISGHWDHYKDGMFVL 318

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
            D   D +  +LR  +T P        +        +YR  PV   E     R     + 
Sbjct: 319 GDEEKDSEVFALRP-MTCPF------QYAIYNSTQHSYRDLPVRFAETSTLFRNESSGEM 371

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      AD  +        +      +     +    I D I  +      +   
Sbjct: 372 HGLIRVRQFTLADGHIVCTPEQLEDEFKNTVDLVKYVMETLGIADDITYRFSKWDPNNTE 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           + +    A +       + +  L  +    +      G  L 
Sbjct: 432 KYINDPEAWENTQNIMREILNHLNIDFTEADDEAAFYGPKLD 473


>gi|291004232|ref|ZP_06562205.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 581

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 2/105 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +     D       +     L  AG+R  +    + + G +  
Sbjct: 473 DELGLVWPREVAPADVHVVIAGKDESVREGAERLAADLDAAGVRVLLD-DRNASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            A+    P  ++ G G  ++G++++KD   G      +       
Sbjct: 532 DAELVGVPTILVVGKG-LAKGVVEVKDRRSGDREEVPVDGAVEHL 575



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+   I + +R   +  G   I  P L   E  ++  ++          +
Sbjct: 40  GIYSWLPLGLRVLRNIEEIVRQEMDAIGAQEIHFPALLPKEPYEATNRWTE----YGPNL 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 96  FRLKDRKGGDYLLGP 110


>gi|134102383|ref|YP_001108044.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915006|emb|CAM05119.1| prolyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 574

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 2/105 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +     D       +     L  AG+R  +    + + G +  
Sbjct: 466 DELGLVWPREVAPADVHVVIAGKDESVREGAERLAADLDAAGVRVLLD-DRNASPGVKFA 524

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            A+    P  ++ G G  ++G++++KD   G      +       
Sbjct: 525 DAELVGVPTILVVGKG-LAKGVVEVKDRRSGDREEVPVDGAVEHL 568



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+   I + +R   +  G   I  P L   E  ++  ++          +
Sbjct: 33  GIYSWLPLGLRVLRNIEEIVRQEMDAIGAQEIHFPALLPKEPYEATNRWTE----YGPNL 88

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 89  FRLKDRKGGDYLLGP 103


>gi|251793646|ref|YP_003008376.1| prolyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247535043|gb|ACS98289.1| hypothetical protein NT05HA_1971 [Aggregatibacter aphrophilus
           NJ8700]
          Length = 571

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 51/166 (30%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G  +     +R+  ++ + IR+     G   +E P+++ ++ L +  
Sbjct: 26  MLRAGMIRP-LASGLYNWLPTGLRVLKKVENIIRDEMNKSGAIEVEMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              ++    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYRQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M    ++    +G
Sbjct: 144 RPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMYQTYSNIFSRLG 189



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/142 (9%), Positives = 38/142 (26%), Gaps = 5/142 (3%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD----SDSL 390
           +              G +  ++  I              EM P  +  +  +        
Sbjct: 430 EDGRPMVLTMGCYGIGVTRVVAAAIEQHHDERGIIWPCDEMAPFTVAIVPMNMHKSESVQ 489

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +   + L   G+         +  G      +    P  ++ G    + G ++ K+ 
Sbjct: 490 EFAEDLYRTLLAQGVEVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNLANGEIEYKNR 548

Query: 451 AKGKELSREIKNNESWREARVA 472
             G++          + +++V 
Sbjct: 549 RTGEKQMIAKDQLLDFLKSQVK 570


>gi|268680547|ref|YP_003304978.1| tRNA synthetase class II (G H P and S) [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618578|gb|ACZ12943.1| tRNA synthetase class II (G H P and S) [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 284

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 40/115 (34%), Gaps = 7/115 (6%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E+P G      +  +++  +     ++    GF  I TP          +   +    K 
Sbjct: 6   EIPTGSKLYFGESAKLKRTLERVASDLLYEAGFQEIVTP-------FFSYHQHQSIDEKE 58

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           +    D+    +SLR D T    R V +         + + I PVFR   H   +
Sbjct: 59  LLRFSDEQNHIVSLRADSTMDAVRLVTKRVGRSTKHSKWFYIQPVFRYPSHEVHQ 113


>gi|226327022|ref|ZP_03802540.1| hypothetical protein PROPEN_00883 [Proteus penneri ATCC 35198]
 gi|225204240|gb|EEG86594.1| hypothetical protein PROPEN_00883 [Proteus penneri ATCC 35198]
          Length = 571

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  D     +R+  +I   +R   +N G   I  P+++ +D   +     ++ 
Sbjct: 31  MIRKLASGLYDWMPTGVRVLRKIEKIVREEMDNAGSLEISMPVVQPADLWLES-GRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +    D   +   L     ++   + R    ++  +       +  
Sbjct: 90  GPELLRFSDRGERPFVLGPTHEEVVTDIVRNEITSYKQLPLNLYQIQTK 138



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +      +      V I  M+       K         LR  GI   +F    +  G  
Sbjct: 461 DARGIIWPDAIAPFQVAILPMNMHRSYRVKEVADRLYNELRAQGIDV-LFDDRKERPGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K      +    + +  ++ + ++A
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNNQIEYKARRSDDKSLVNVDDVVAFIKEQLA 571


>gi|225568704|ref|ZP_03777729.1| hypothetical protein CLOHYLEM_04783 [Clostridium hylemonae DSM
           15053]
 gi|225162203|gb|EEG74822.1| hypothetical protein CLOHYLEM_04783 [Clostridium hylemonae DSM
           15053]
          Length = 583

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 1/92 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          Q  T  L+ AGIR E+  G S+  G +++ A  +  P  I
Sbjct: 487 WLAPVQVKILPVSDKFADYAQKVTDELKAAGIRVELD-GRSEKLGYKIREAQMQKVPYMI 545

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           I G  E +  ++ ++   +G   S E+K    
Sbjct: 546 IVGEKEVAENVVSVRKRDEGDIGSMELKTFTE 577



 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R ++   G+  I TP++  S  L +     D     +++ 
Sbjct: 214 GFPFFLPKGMVLKNLLIDYWRQLHLREGYVEISTPII-LSRHLWENSGHWDHYKDNMYTT 272

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 273 VI-DEEDYAVKPMNCPG 288


>gi|152991769|ref|YP_001357490.1| ATP phosphoribosyltransferase regulatory subunit [Sulfurovum sp.
           NBC37-1]
 gi|151423630|dbj|BAF71133.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 281

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 6/118 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              E+P G      +  R++  I      + +N GF+ I TP+  Y         +    
Sbjct: 3   FEHEIPSGSRLYFGESARLKREIEFVSAEMLDNLGFEEIVTPIFSYHQ------HECFND 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            K +  L D+    ++LR D TA + R V +         + + I P          +
Sbjct: 57  KKPLVRLNDESNHEVTLRADSTADVVRIVTKRLGRSTESKKWFYIQPTVTFPTREQYQ 114


>gi|530447|emb|CAA83774.1| His-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 178

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 11/189 (5%)

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
                 +        +VRGL+YYTG ++E       + +            GGRY+ LV 
Sbjct: 1   DLFKEMNISTIHDDRLVRGLDYYTGFIFEXXXXAKNIEQ--------XXIAGGRYNNLVY 52

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                N+PA GF +G+ R I  +K   +  N   +   + + T+  D  ++   Q   ++
Sbjct: 53  EIGNINLPACGFGMGLERFINIIKEQNNKLNKNDQS--IDLYTICLDQSAIKLNQQILEL 110

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            R+ G+ ++     + +  + LK +D+ N    II G  E +     IK+     E+   
Sbjct: 111 SRSIGLISDSNYY-NMSLKSALKKSDKLNPKYLIILGEKEATSNQFIIKNKINKTEIKTT 169

Query: 460 IKNNESWRE 468
           + N  +  +
Sbjct: 170 LTNFVNDLK 178


>gi|319957675|ref|YP_004168938.1| tRNA synthetase class ii (g h p and s) [Nitratifractor salsuginis
           DSM 16511]
 gi|319420079|gb|ADV47189.1| tRNA synthetase class II (G H P and S) [Nitratifractor salsuginis
           DSM 16511]
          Length = 283

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 6/118 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              E+P G      +  RI+ RI +S     E  G+  + TPL  Y         +    
Sbjct: 3   FEHEIPSGSRLYFDESARIKRRIENSAAEFLEERGYREMVTPLFSYHQ------HESFDD 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            K +  L D D   +SLR D TA + R             + + I PV+R       +
Sbjct: 57  PKALIRLNDTDNHEVSLRADSTADVVRIATRRLGRSTDFKQWFYIQPVYRFPTREQYQ 114


>gi|223039114|ref|ZP_03609404.1| threonyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222879475|gb|EEF14566.1| threonyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 606

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 82/262 (31%), Gaps = 7/262 (2%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D+S  F   + +  E I  ++ F    +E         +    A   G +E+   +
Sbjct: 348 EFAQDDSHIFCMPSQI-KENILEILKFAGKIMENFGFHYEMEISTKPAKAIGGDEIWETA 406

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGR 333
               K   + N  K       G  Y      +         +                G 
Sbjct: 407 TKALKEALDENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLGY 466

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    R +   +           + + ++                +  +      L   
Sbjct: 467 IDANNERRQPVMLHRALLGSFERFIGILIEHTGGELPFFVAPTQ--VVIVPISDAHLDYA 524

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + LR  G+ +E+    +++   +++ A+++  P+  + G  E +   + ++D    
Sbjct: 525 KTVAKELRKIGVDSEIA-SKNESLNKRIRTAEKQRVPMIAVLGDNEVANSAIALRDRTTR 583

Query: 454 KELSREIKNNESWREARVAQIT 475
           ++   ++       ++++A++T
Sbjct: 584 EQKDMKLDEFVGLLKSKLAEVT 605



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R+++   +   + + G++P+  P L  +D   K         + ++  
Sbjct: 232 GLPIWLPNGGRLRSKLEQILYKAHRDRGYEPVRGPELLKADV-WKKSGHYANYKENMY-F 289

Query: 74  QDDDGQWISLRYDLTAP 90
              D     ++      
Sbjct: 290 TTIDEAEYGIKPMNCVG 306


>gi|83943742|ref|ZP_00956200.1| ATP phosphoribosyltransferase regulatory subunit [Sulfitobacter sp.
           EE-36]
 gi|83845422|gb|EAP83301.1| ATP phosphoribosyltransferase regulatory subunit [Sulfitobacter sp.
           EE-36]
          Length = 359

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 126/371 (33%), Gaps = 43/371 (11%)

Query: 23  IRIRNRILDS---IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
           +  R+ IL     +R ++E  G   +E P+L+ +++L     ++ R    V S      Q
Sbjct: 1   MATRSDILAKAASLRAMFEAQGAAVVEPPILQPAETLLDLYGEDIRARAYVTSDAMRGEQ 60

Query: 80  WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
              LR D T P+   V  +      P R    G VFR ++  P R  ++IQ   +     
Sbjct: 61  M--LRPDYTLPV---VQMHMAHGADPARYTYAGEVFRRQERDPNRANEYIQAGYEVFDRG 115

Query: 140 AETA-----------------------DAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
              A                       D  + M     L+    ++      I   +   
Sbjct: 116 DPAAADAEVFALIQGALEGLPVTAVTGDIGILMAAVAGLDTSASRKAALMRHIWRPRRFR 175

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSE 235
            +L++    G   +      L A D      L G++ L   E R            L+  
Sbjct: 176 ALLDRY--AGKTPMPATRAALLASDGAITAPLIGLRSLDEIETRIAALRADATEPALSRT 233

Query: 236 QIDIMVSFLSID--LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           Q+ ++++ L +   +  ++ +L++L     A  +  + +    + +   G ++  +   +
Sbjct: 234 QVSLLLALLDVRETMPNAISQLHDLAVDMPAISEAVDRVAAREKALAARGVDTGNLMFEA 293

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           +  R          E   GF             ++  GGRYD L  R            +
Sbjct: 294 SFGR-------VSMEYYDGFVFGFRAATRPDLPTIATGGRYDALTRRLGQGGEIPAVGGV 346

Query: 354 GISRLIVALKS 364
               L++ L++
Sbjct: 347 MRPGLMLELEA 357


>gi|284173635|ref|ZP_06387604.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261600981|gb|ACX90584.1| threonyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 545

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 54/450 (12%), Positives = 121/450 (26%), Gaps = 39/450 (8%)

Query: 42  FDPIETPLLEYSDSLGKFL------PDED---RPNK-GVFSLQDDDGQWISLRYDLTAPL 91
           +  I     E  + L  +L       + D      K  +FS  ++ G  + L        
Sbjct: 111 YVRIRGVAFETEEQLKDYLTWLEKAEETDHRLIGEKLDLFSFHEEAGSGLVL-------- 162

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
                                  F  E         + +    +V  +     +    + 
Sbjct: 163 ---------FHPKGQTLRNELITFMREI---NDSMGYQEVYTSHVLKTDIWKISGHYTLY 210

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
            D L    ++ ++Y +   N      I +       D                K  L G+
Sbjct: 211 RDKLIVFNMEGDEYGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGL 270

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAGEKGF 269
             + G    D+   F K   L  E   ++   + +  +      ++   +        G 
Sbjct: 271 LRVRG-FVQDDGHIFLKEDQLKEEIKMLISKTVEVWHKFGFKDDDIKPYLSTRPDESIGS 329

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFG 326
           +EL   +     S    + +K       G  Y     +E         +           
Sbjct: 330 DELWEKATNALISALQESGLKFGIKEKEGAFYGPKIDFEIRDSLGRWWQLSTIQVDFNLP 389

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                   D   ++ +   V    +      + + L+  +           V +  +   
Sbjct: 390 ERFKLEYIDKDGTKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSP--VQVKVLPIT 447

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +     +     +R   IRAE+   + +    ++K A  +  P  +I G  E S+G + 
Sbjct: 448 DEVNEYAEKVLNDMRKRRIRAEIDY-AGETLSRRIKNAYDQGVPYILIVGKKEASQGTVT 506

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITI 476
           ++     +  + + +         + Q  +
Sbjct: 507 VRARGNIEVRNVKFEKFLDLMITEITQRDV 536


>gi|167856063|ref|ZP_02478806.1| prolyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|219871797|ref|YP_002476172.1| prolyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254782903|sp|B8F7C2|SYP_HAEPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167852812|gb|EDS24083.1| prolyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|219692001|gb|ACL33224.1| prolyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 571

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 39/115 (33%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G  +     +R+  ++ + IR      G   +E P+++ +D L    
Sbjct: 26  MLRAGMIRP-LASGMYNWLPTGLRVLKKVENIIREEMNKSGALEVEMPVVQPAD-LWVES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +   +D   +   L     ++   L R    ++  +       +  
Sbjct: 84  ERWEDYGPELLRFKDRGDRPFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTK 138



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 31/96 (32%), Gaps = 1/96 (1%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V+   M       +  +   + LR+ G+         +  G      +    P  ++ G 
Sbjct: 477 VVPMNMHKSESVQTFAEDLYKTLRSQGVDVIFDDRKER-PGVMFADMELIGVPHMLVIGE 535

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
                G ++ K+   G++          + + R+ Q
Sbjct: 536 KNLENGEIEYKNRRTGEKQMIAKDQLLDFLKGRINQ 571


>gi|188996057|ref|YP_001930308.1| threonyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229558457|sp|B2V6M2|SYT_SULSY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188931124|gb|ACD65754.1| threonyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 643

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 19/117 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L   +   Q L    IR E+   + +    +++ A+ +  P  +
Sbjct: 541 WLSPVQVKIIPIADKHLEYAETVKQKLLENDIRVELDDRNER-MNKKIRDAELQKIPFML 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           + G  E   G + ++   KGK+ S                 T+ I E VS +K+I+ 
Sbjct: 600 VVGDKEAETGTVAVR--EKGKQGS----------------QTLSIDEFVSKIKEIIS 638



 Score = 41.0 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
              K   IR  I D+ +  +   G+  + TP +   + L +         + ++
Sbjct: 270 WLPKGAIIRKEIEDAWKKEHLKRGYQLVYTPHV-GKEQLWQTSGHLSFYQENMY 322


>gi|198283898|ref|YP_002220219.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218666412|ref|YP_002426532.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226731419|sp|B7J4Y9|SYP_ACIF2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731420|sp|B5EKH7|SYP_ACIF5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|198248419|gb|ACH84012.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518625|gb|ACK79211.1| prolyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 570

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 69/241 (28%), Gaps = 13/241 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            L  G        +R+  ++   +R   +  G   +  P+++ ++ L +     ++    
Sbjct: 34  RLASGLYTWMPLGLRVLRKVERVVREEMDRSGAQELLMPVVQPAE-LWQESGRWEQYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  L+D   +   L     ++ + LAR    ++  +          +R     R      
Sbjct: 93  LLRLRDRHDREFCLGPTHEEVISDLARREIHSYRQLPVNFYQIQTKFRDEIRPRFGLMRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
             F            SS E     M          +G+    +     +   + G     
Sbjct: 153 REFIMKDAYSFHMDHSSLEITYQAMYEAYQRVFTRLGLS---FRAVEADNGAIGGKRSHE 209

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT--SEQIDIM 240
                D   + ++     D          +  L E     + +  +   +   +EQ + +
Sbjct: 210 FHVLADSGEDAIVSCHHCDYAANMEKAASRPDLAETEIPLAAERVRTPGIRTVAEQAEHL 269

Query: 241 V 241
            
Sbjct: 270 G 270


>gi|317121850|ref|YP_004101853.1| prolyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591830|gb|ADU51126.1| prolyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 586

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 6/133 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +      R   ++   +R      G   +  P+++ ++ L +         + ++ L
Sbjct: 38  GIYEWLPLGRRAVAKVEAIVREEMNRKGGLEVGLPIVQPAE-LWRETGRWAEYGEEMWRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D  G+   L     ++   L R    ++  +      Y+I   +R+E        +  +
Sbjct: 97  KDRHGREYCLGPTHEEIITDLVRATVSSYRQLP--LLLYQIQNKYRDEIRPRFGVMRARE 154

Query: 131 CDVDNVGSSAETA 143
             + +  S    A
Sbjct: 155 FVMKDAYSFDVDA 167



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 4/115 (3%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++     V++    ++ D     +     L  AG+ A +     +  G +   AD 
Sbjct: 466 IWPMSVAPFHAVVVPVNYNEPDQRQAAERIYGQLVEAGVEAVLDDRDER-PGVKFNDADL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              PL +  G    + G ++I D A G+     +++  +    R   +   + EL
Sbjct: 525 IGFPLRVTVGPRGLAEGKVEIVDRATGQADPVPVEHAAAEVARR---VRAALDEL 576


>gi|330932248|ref|XP_003303708.1| hypothetical protein PTT_16030 [Pyrenophora teres f. teres 0-1]
 gi|311320130|gb|EFQ88206.1| hypothetical protein PTT_16030 [Pyrenophora teres f. teres 0-1]
          Length = 1619

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 60/470 (12%), Positives = 140/470 (29%), Gaps = 48/470 (10%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            ++ ++N + D +  I+  +G   I+         +  +   +   N  V  L D  G  +
Sbjct: 1015 DVLLQNLVRDRLAMIFRGHGAVEIQ------RQVILPW--SDHYANSNVVKLFDPSGTLV 1066

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
             L YDLT P AR +      +       ++                       +      
Sbjct: 1067 QLPYDLTLPYARTIGRGGAFLEKTFTIGQVYRENYAGSAPRSNGEADFDILSHDTLDLPL 1126

Query: 142  TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
                 + ++     E    +       IN+  +LD I+E   +    +   + ++ +   
Sbjct: 1127 KEAEVLKVVDEIIDEFPSFRSTQMCFHINHADLLDMIMEFCRIKAPKRAAVKAVLSKLNI 1186

Query: 202  KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK----SMHELYE 257
              +    Q ++  L           +    + +  +D +  F   +  +     +  L+E
Sbjct: 1187 GKNN--WQSIRNDLR----------SSDIGIPTTSLDDLARFDWRETPEKAFAKLQRLFE 1234

Query: 258  LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
              K        F  L  + + ++             +      Y  G +++ +       
Sbjct: 1235 GTKYLDRTHAIFAHLTSVIDYMKLWNVKRKVYISVLSSFNERYYSGGILFQCLFDTKQRE 1294

Query: 318  EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK-------------- 363
                   +  +    R  G           A G ++G  RL+ ++               
Sbjct: 1295 VLAAGGRYDKLIEEYRPRGPSHAHPPAAYHAVGVNLGWDRLVASMSRYIKKPEKSNFMRK 1354

Query: 364  -SLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             + E + +               D +   S        L + G  AE+ +  ++N    L
Sbjct: 1355 HAEEDTPSISWMPRRCDCLVASFDPNVLRSTGVKMVADLISHGYTAELAVD-ARNTEELL 1413

Query: 422  K-YADRRNCPLAII---QGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            + Y D R+  + +I          +  L++K +AK ++         ++ 
Sbjct: 1414 RHYRDDRHSWVIVIKQGVAPD---KPELKVKSIAKKEDTDMRSAELLNYL 1460


>gi|254586273|ref|XP_002498704.1| ZYRO0G16632p [Zygosaccharomyces rouxii]
 gi|238941598|emb|CAR29771.1| ZYRO0G16632p [Zygosaccharomyces rouxii]
          Length = 1657

 Score = 67.6 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 56/486 (11%), Positives = 137/486 (28%), Gaps = 80/486 (16%)

Query: 15   FADCP---------TKEIRIRNRILDSIRNIYENYGFDPI-ETPLLEYSDSLGKFLPDED 64
              D                ++ ++L+ +  ++  +G     E P +        F     
Sbjct: 1020 TNDILFDNSPPQSTPFGQILKAKMLEELIKLFRKHGAVANNEPPSI--------FPKAPI 1071

Query: 65   RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGP 122
               + V+ + D  G  + L+YDLT P+ARY+++N + +    RT      P        P
Sbjct: 1072 YGTQNVYEVLDQGGTVLQLQYDLTYPMARYLSKNPNCVSKQFRTQYVFRPPEHSKSSLEP 1131

Query: 123  GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
             +F +     + +  + +   +AE   ++ + L    +      + + N   +   +   
Sbjct: 1132 RKFGEIDFDIISSSSADSPFYEAESIKIIEEILTVFPVFEKTNTLFVINHANILESVFDY 1191

Query: 183  GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                  +      +L  +                +   +   +     N+ S  ++ +  
Sbjct: 1192 TNIDKAQRPFVSRMLSQVGY-------------TKTFKEAKSELKSQLNIPSTSLNDLEL 1238

Query: 243  F-LSIDLEKSMHELYELVKGTIAGEKGFN---ELVVISELVRKSGYNSNRIKISSTIVRG 298
            F   +D E +   L++++  +    K       +  +   ++      N I         
Sbjct: 1239 FDFRLDFEAAKKRLHKVMVDSPYLRKVDESLLHISKVINYLKPLDVTRNVIIAPLCSYNS 1298

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
              Y  G +++A+                       +             A GF++    +
Sbjct: 1299 GFYRNGIMFQAVYNSGSCRSLVAAGG-RYDSLISYFSRPSGDKSHNTQRAVGFNLAWETI 1357

Query: 359  IVALKS-----------------LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
                ++                  + + +       VL++    +S   +        L 
Sbjct: 1358 FSIAQNYFKLASGNRVKKRNKFIRDKALDWRPSRCDVLVSCFS-NSILNTTGVNILNTLW 1416

Query: 402  TAGIRAEM--------FLGSSKNFGNQLKYADRRNCPLAIIQGTG--ERSRGM-----LQ 446
              GI  +          + S          A +      I+                 L+
Sbjct: 1417 KNGISTDFLRHCYTVDDVVSG---------AQKDGVDWIILIKQQTYTLPNHKRKYKPLR 1467

Query: 447  IKDLAK 452
            +K+L  
Sbjct: 1468 VKNLQT 1473


>gi|260655005|ref|ZP_05860493.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630320|gb|EEX48514.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 623

 Score = 67.2 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 2/137 (1%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y G   +     +        I R +  L    +       M PV +  +  +   ++  
Sbjct: 478 YIGPDGKEHRPVMLHRTILGSIERFMGILIEQYAGAFPYW-MAPVQVKILPVNESHVAYA 536

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +     L   G R E+ L S +  G +++ A     P  ++ G  E     + ++D A+G
Sbjct: 537 KDLKDQLADRGHRVEIDL-SDEKLGKKIRNAQVEKVPFMLVIGDKEVENKTVALRDRAEG 595

Query: 454 KELSREIKNNESWREAR 470
            + S   +        +
Sbjct: 596 DKGSVSQEQLFELLANQ 612



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + + N +LD  R ++   G+    TP++   D   +     D   + ++  
Sbjct: 243 GFPFFHPKGMVVMNSLLDFWRRLHTLNGYSEARTPMILNRDLWVQS-GHWDHYQQNMY-F 300

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 301 TTIDEMPCAIKPMNCPG 317


>gi|294500903|ref|YP_003564603.1| prolyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294350840|gb|ADE71169.1| prolyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 565

 Score = 67.2 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 62/553 (11%), Positives = 143/553 (25%), Gaps = 92/553 (16%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++   +R   +  G   +  P L+ ++ L +           
Sbjct: 34  QNASGVYSFLPLGKRVLQKVEQIVREEMDRAGSVELLMPALQQAE-LWQESGRWYSYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  ++D  G+  +L     ++   L R   +++  +          +R     R      
Sbjct: 93  LMRMKDRHGREFALGATHEEVITSLLRDEVKSYKRLPLNLYQIQTKFRDEKRPRFGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK--------I 174
             F             S +    +M    +   E  G+                     +
Sbjct: 153 REFIMKDAYSFHASQESLDEVYDKMFAAYSRIFERCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L  I E    + D       + +  +    +   +  K L      +        A L  
Sbjct: 213 LSEIGEDTIAYSDTSSYAANVEMAPVVNTYEKSGEAEKELTKVETPNQHSIEDVAAFLNV 272

Query: 235 EQIDIMVSFL------------SIDLEKSMHELYELVKGTIAGEKGFNELVVISELV--- 279
           E    + S L              D E +  ++    + ++       E   + +     
Sbjct: 273 EATSCIKSLLFKVDDRFVLVLVRGDHEVNDIKVKNYFEASVVELATPEETKEVLKCAVGS 332

Query: 280 ---------------RKSGYNSNRIKISSTIVRGLEYYTGCVYEAI---LGFPVMNEKQK 321
                                +N +  ++             + A      F    ++  
Sbjct: 333 VGPIGVSDSVEVVADHAVKAIANGVCGANEEGYHYTNVNERNFNATYEDFRFIQEGDQSP 392

Query: 322 PVVFGSVGGGG-----------RYDGLV------SRFKGQNVPATGFSIGISRLIVALKS 364
                     G           RY   +         + Q +    + IG+SR + A+  
Sbjct: 393 DGQGVIKFAKGIEVGHVFKLGTRYSEAMGATYLDENGRNQPMIMGCYGIGVSRTVAAIAE 452

Query: 365 L-----ESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                             V +  ++  + +     +     L        +     +  G
Sbjct: 453 QFNDENGLLWPEAVTPYQVHVIPVNVKNDEQRELGEKLYNELLDNRFEVLLDDRQERA-G 511

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +   +D    P+ +  G    S G++++K    G+                   + + +
Sbjct: 512 VKFADSDLIGLPVRVTVGKR-ASEGIVEVKVRKTGE------------------SLEVSV 552

Query: 479 SELVSTVKKILQE 491
             LVSTVK++L +
Sbjct: 553 DNLVSTVKELLAK 565


>gi|118602380|ref|YP_903595.1| prolyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|152016598|sp|A1AW17|SYP_RUTMC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118567319|gb|ABL02124.1| prolyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 559

 Score = 67.2 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 45/159 (28%), Gaps = 8/159 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L ++L  G        +R+ +++ + IR      G   +  P+++ ++ L K     D+ 
Sbjct: 31  LISKLASGLYSYLPMGVRVLHKVENIIRQEMNKSGAQEVFMPVVQPAE-LWKTSGRWDKY 89

Query: 67  NKGVFSLQDDDGQWISLRY--D-----LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              +    D   +   L    +     L A   R   +           +R     R   
Sbjct: 90  GTELLRFTDRHQREFCLGPTHEEVITHLAAQYLRSYKQLPMNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                F             S +     M     +  + +
Sbjct: 150 MRSREFIMKDAYSFHLDQYSLQQTYDVMYQTYCNIFDRL 188


>gi|295706249|ref|YP_003599324.1| prolyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294803908|gb|ADF40974.1| prolyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 565

 Score = 67.2 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 61/550 (11%), Positives = 140/550 (25%), Gaps = 92/550 (16%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+  ++   +R   +  G   +  P L+ ++ L +           +  
Sbjct: 37  SGVYSFLPLGKRVLQKVEQIVREEMDRAGSVELLMPALQQAE-LWQESGRWYSYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRF 125
           ++D  G+  +L     ++   L R   +++  +          +R     R        F
Sbjct: 96  MKDRHGREFALGATHEEVITSLLRDEVKSYKRLPLNLYQIQTKFRDEKRPRFGLLRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK--------ILDG 177
                        S +    +M    +   E  G+                     +L  
Sbjct: 156 IMKDAYSFHASQESLDEVYDKMFAAYSRIFERCGLNFRAVIADSGAMGGKDTHEFMVLSE 215

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I E    + D       + +  +    +   +  K L      +        A L  E  
Sbjct: 216 IGEDTIAYSDTSSYAANVEMAPVVNTYEKSGEAEKELTKVETPNQHSIEDVAAFLNVEAT 275

Query: 238 DIMVSFL------------SIDLEKSMHELYELVKGTIAGEKGFNELVVISELV------ 279
             + S L              D E +  ++    + ++       E   + +        
Sbjct: 276 SCIKSLLFKVDDRFVLVLVRGDHEVNDIKVKNYFEASVVELATPEETKEVLKCAVGSVGP 335

Query: 280 ------------RKSGYNSNRIKISSTIVRGLEYYTGCVYEAI---LGFPVMNEKQKPVV 324
                             +N +  ++             + A      F    ++     
Sbjct: 336 IGVSDSVEVVADHAVKAIANGVCGANEEGYHYTNVNERNFNATYEDFRFIQEGDQSPDGQ 395

Query: 325 FGSVGGGG-----------RYDGLVSRFKGQNVPAT------GFSIGISRLIVALKSL-- 365
                  G           RY   +          +       + IG+SR + A+     
Sbjct: 396 GVIKFAKGIEVGHVFKLGTRYSEAMGATYLDENGRSQPMIMGCYGIGVSRTVAAIAEQFN 455

Query: 366 ---ESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  + +     +     L        +     +  G + 
Sbjct: 456 DENGLLWPEAVTPYQVHVIPVNVKNDEQRELGEKLYNELLDNRFEVLLDDRQERA-GVKF 514

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             +D    P+ +  G    S G++++K    G+                   + + +  L
Sbjct: 515 ADSDLIGLPVRVTVGKR-ASEGIVEVKVRKTGE------------------SLEVSVDNL 555

Query: 482 VSTVKKILQE 491
           VSTVK++L +
Sbjct: 556 VSTVKELLAK 565


>gi|152993995|ref|YP_001359716.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166225510|sp|A6QD00|SYT_SULNB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|151425856|dbj|BAF73359.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 604

 Score = 67.2 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 35/100 (35%), Gaps = 1/100 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +              + L   GI +E+   +  +   +++ A+++  P  +I G
Sbjct: 506 PTQVIFVPISEGHAGYAYGLKKKLMLEGIDSEVSDKND-SLNKRIRTAEKQRVPYVVIIG 564

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
             E     + I++    ++ +            ++ +  I
Sbjct: 565 DEEVQNNTVAIRNRRTREQYNLTQDEFMVELTKQLQEGKI 604


>gi|39934225|ref|NP_946501.1| ATP phosphoribosyltransferase regulatory subunit [Rhodopseudomonas
           palustris CGA009]
 gi|39648073|emb|CAE26593.1| putative histidyl-tRNA synthetase [Rhodopseudomonas palustris
           CGA009]
          Length = 382

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 65/370 (17%), Positives = 121/370 (32%), Gaps = 55/370 (14%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           +++   +   G+     P+L+ ++       ++ R  K ++   D  G+ + LR DLT P
Sbjct: 17  EALLQSFAEAGYAQATPPILQPAEPFLDLSGEDIR--KSLYLTTDASGEELCLRPDLTIP 74

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
           +AR    +      P     +GPVFR     P  F Q           +A  A+     +
Sbjct: 75  VAREYLASK-AAGQPVGFCYLGPVFRQRGGKPSEFLQAGIESFGRQDRAAADAEMLALAL 133

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL-- 208
            A T    G         +     L   L+ + +     + +          L++  L  
Sbjct: 134 GATTALKAGEVEVR-TGDVALFAALIDALDLMPVWRRRLMKDFHRKASLAHDLERLTLAP 192

Query: 209 ------QGVKLLLGEGRTDNSGDFTKGA------------------------------NL 232
                 +GV   L       +                                      L
Sbjct: 193 STSNEYEGVLAALAGSDRKAALALVTDLMSIAGATTLGGRSVAEIADRFLEQSTLKSGAL 252

Query: 233 TSEQIDIMVSFLSIDL---EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
             + +D +  FL+I     +             ++ +   ++       +   G + +++
Sbjct: 253 PRDALDKIKRFLAITGAPTDALKALRALAADAKLSIDAAIDQFEARIGFLAGRGIDLSKV 312

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPA 348
           + S+   RG++YYTG  +E                   +  GGRYDGL+S+      +PA
Sbjct: 313 RFSTAFGRGVDYYTGFEFEVHRAGNGDE---------PLVAGGRYDGLMSQLGAASPIPA 363

Query: 349 TGFSIGISRL 358
            GFSI I  +
Sbjct: 364 VGFSIWIEAM 373


>gi|239907072|ref|YP_002953813.1| prolyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|259511592|sp|C4XTD0|SYP_DESMR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239796938|dbj|BAH75927.1| prolyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 575

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 55/164 (33%), Gaps = 12/164 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        ++  N +   +R   +  G   I  P ++ +D L K     D  
Sbjct: 31  MIRKLTAGIYTYLPLGLKALNNVAKIVREEMDRAGALEILMPAVQPAD-LWKESGRWDFY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +    D   +   L     ++   L R+   ++  +      Y+I   FR+E     
Sbjct: 90  GRELLRFVDRHDRESCLGPTHEEVVTDLVRHEIRSYRQLP--VNLYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAET------ADAEMCMMMADTLEAVGIK 161
              +  +  + +  S  +       +   M    A   + +G+K
Sbjct: 148 GLMRGREFVMKDAYSFDKDDSGADASYWGMYEAYARIFKRLGLK 191



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 1/98 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI     D  + +K       L  AGI   +     +  G + K AD  
Sbjct: 463 FPPTIAPFEAALINLSPKDETACAKADEIYAALTAAGIETLLDDRDER-PGVKFKDADLM 521

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             P+ +  G    +RG+++ KD   G++    ++    
Sbjct: 522 GHPIQLTLGGKGLARGIVETKDRRTGEKGELPLEGFFE 559


>gi|119719664|ref|YP_920159.1| threonyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|166225513|sp|A1RY76|SYT_THEPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119524784|gb|ABL78156.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermofilum
           pendens Hrk 5]
          Length = 608

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 49/406 (12%), Positives = 119/406 (29%), Gaps = 36/406 (8%)

Query: 85  YDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
            + T  +   VAE                   N  +   +          +     E  +
Sbjct: 218 PEATI-MLDAVAEYAWQCARSLGIPVYKVRGTNTFNLSFKPVAQHAQLFGDRLYQMEVDE 276

Query: 145 AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
            ++ +  A   +   + ++      +       + +   L    +L     + +      
Sbjct: 277 KKLILRYAACHQQFAMVKDWEISYRDLPFGAFEVADSYRLEQPGELLLCFRLRKFYMPDL 336

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA 264
               + +   +      +S  + +   L  + +  + +     LE+    L  LV+    
Sbjct: 337 HVFCKDLAEAMEVSFRIHSKIYEEIRKLGRDYVS-IYNLTRSFLEQHRDYLKRLVE---- 391

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
             +G   L+      +     +    I   + R  E  T           V N ++  + 
Sbjct: 392 -MEGKPVLLHFVPEGKYYWVINVEYNIIDELGRPREIGT-------FQIDVGNAERFGIT 443

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
           +       RY  ++      ++    F++  +    A        +    + PV +  + 
Sbjct: 444 YVDENNTRRYPVIIHTAIIGSLERYVFAVLDTAAKKA--RAGEVPSLPLWLSPVQVRVIP 501

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
           H S+ L         L   GIR ++     ++   +++ A+ +  P  ++ G  E   G 
Sbjct: 502 HSSEYLKLADSIADKLEEQGIRVDVDDRE-ESLAKRIRDAEVKWIPYVVVVGKREAESGK 560

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           L ++   +G                   Q  + + ELV  +   L+
Sbjct: 561 LTVRVRGQG-------------------QYEMSLEELVGRLVSELK 587


>gi|282903818|ref|ZP_06311706.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282595436|gb|EFC00400.1| proline--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
          Length = 567

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 65/542 (11%), Positives = 142/542 (26%), Gaps = 81/542 (14%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   +R   E      I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  LQD  G+  +L     +L   + R   +++  +       +         
Sbjct: 86  WGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E      ++   Q            A   +    A    
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGS 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL------------R 198
                 A+     D  +          I +   ++  +  +  +  +             
Sbjct: 206 HTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPIEKIETPNVKTAQE 265

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK--SMHELY 256
             D L +   + VK ++ +   +      +G +  ++    + S+   D  +  +  E+ 
Sbjct: 266 LADFLGRPVDEIVKTMIFKVDDEYIMVLVRGHHEINDI--KLKSYFGTDNIELATQDEIV 323

Query: 257 ELVKGTI---------AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            LV               +   +  V     +           I+  + R         +
Sbjct: 324 NLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVPAT------GFSIG 354
             IL    +++      F            G +Y   ++     N           + IG
Sbjct: 384 RFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           ISR + A+              ++      LI+      D                    
Sbjct: 444 ISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEF-NTKFDV- 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++    +  G +   AD    PL I+ G    S G++++K+   G      I +  +   
Sbjct: 502 LYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVIT 560

Query: 469 AR 470
            +
Sbjct: 561 NK 562


>gi|237755902|ref|ZP_04584494.1| threonyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691927|gb|EEP60943.1| threonyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 643

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 19/117 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L   +   Q L    IR E+   + +    +++ A+ +  P  +
Sbjct: 541 WLSPVQVKIIPIADKHLEYAETVKQKLLENDIRVELDDRNER-MNKKIRDAELQKIPFML 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           + G  E   G + ++   KGK+ S                 T+ I E VS +K+I+ 
Sbjct: 600 VVGDKEAETGTVAVR--EKGKQGS----------------QTLSIDEFVSKIKEIIS 638



 Score = 41.0 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
              K   IR  I D+ +  +   G+  + TP +   + L +         + ++
Sbjct: 270 WLPKGAIIRKEIEDAWKKEHLKRGYQLVYTPHV-GKEQLWQTSGHLSLYQENMY 322


>gi|195341757|ref|XP_002037472.1| GM12941 [Drosophila sechellia]
 gi|194131588|gb|EDW53631.1| GM12941 [Drosophila sechellia]
          Length = 1589

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 63/479 (13%), Positives = 128/479 (26%), Gaps = 48/479 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL    +           N     L    G  + L 
Sbjct: 970  VIEFVKAKVVNLFRKHGAIEVDSPLLSPLSA----GNSTANANANAVHLMTHSGCVVVLP 1025

Query: 85   YDLTAPLARYVAEN--FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N       +            N          F            + 
Sbjct: 1026 CDLRTQFARHVTMNSVNLIRRYCVDRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDA 1085

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   +   L  +  K  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1086 ELLSLAFEITSELPRLREK--NLAIRMNHTNLLRAILIYCNVPKAQYGALFEGTMDFIES 1143

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      +     ++  S        L +  +    S +     KS+          
Sbjct: 1144 RISRFQFHSSITGIMEKSRTSAQTLMDMLLANFLLTGSRSTVDDSALKSLMRGKGEAASL 1203

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G     EL  +  L    G    +  I       + +        +       +  + 
Sbjct: 1204 ARG--ALRELETVVGLAYSLG---VKCPIHIWAGLPISFDRASNGGIVWQMTADLKPNRS 1258

Query: 323  VVFGSVGGGGRYDGLVSRFK---------GQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                 +  G RYD ++  F+           +      +     L   + ++        
Sbjct: 1259 GHPSVLAIGERYDSMLHEFQKQAQKFNTAMPSRGVLSGAGLTFSLDKLVAAVGVEYAKDC 1318

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG--NQLKYADRRNCPL 431
                V I         L       ++L + GIR  +   ++   G   Q   A R     
Sbjct: 1319 RAIDVGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIV-EAASELGDEAQ-DLA-RLGALH 1374

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
             I+        G L+++                S+   R  +  +  +ELV  ++K+L+
Sbjct: 1375 VILVAE----NGSLRVR----------------SFERERFQERHLTRTELVEFIQKMLR 1413


>gi|148642463|ref|YP_001272976.1| glycyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|261349423|ref|ZP_05974840.1| glycine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|148551480|gb|ABQ86608.1| glycyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|288861785|gb|EFC94083.1| glycine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 564

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 2/93 (2%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V I  + +           T  LR +G + E     S   G +   AD    PLAI   
Sbjct: 471 QVGIYPLVNKEGPREIAIEITDKLRESGFKVE--YDVSGTIGKRYARADEIGIPLAITVD 528

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                   + +++     +    I   + + E 
Sbjct: 529 FDSLEDNKVTVRNRDSEAQERIAIDEIKDYLEE 561



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFL 60
           GF D       ++N I+   R  Y +  GF  IE P +   + L    
Sbjct: 27 SGFTDYGPLGASLKNNIMQKWRKQYVSGEGFYEIEGPTVMPKEVLKASG 75


>gi|160915433|ref|ZP_02077644.1| hypothetical protein EUBDOL_01441 [Eubacterium dolichum DSM 3991]
 gi|158432553|gb|EDP10842.1| hypothetical protein EUBDOL_01441 [Eubacterium dolichum DSM 3991]
          Length = 553

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 53/545 (9%), Positives = 135/545 (24%), Gaps = 85/545 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK+        G         R+  +I D +R   +  G   +  P L   +   +  
Sbjct: 21  MIKKSS------AGIYMIMPMGKRVLKKIEDIVREEMDAAGAQELLMPALIPEEVY-EIS 73

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D     +F+L+D   +   L     +L             +                
Sbjct: 74  GRRDAFGSNMFALKDRYQKNYVLGPTHEEL---FTLAAMMKGRSYKDFPYNLYQIQTKFR 130

Query: 118 EKHGPGR---------FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           ++  P            +     D+DN                      +  K      G
Sbjct: 131 DETRPRYGLIRTREFIMKDAYSFDIDNEHLHESYMKMFDAYKKIFDRCDLNYKIVKADTG 190

Query: 169 INNRKILDGILEKIGLHGD-----------------------DKLNERLIVLRAIDKLDK 205
                + +       +  D                       ++  E L  +  ++  + 
Sbjct: 191 AMGGSLSEEFQAICDVGEDVVVTCEHCGFSSNLEITEVVDRAEECREALKTMEIVETPNA 250

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGAN-----------LTSEQIDIMVSFLSIDLEKSMHE 254
             ++ V     +   D         +               +  ++    + ++E +  E
Sbjct: 251 KTIEEVAKFFDKSCDDFVKTLIYNVDGKIYAFLLKGTRELNETKVLKLLQANEMELASFE 310

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             E +     G  G   +     + R+  Y  N I  ++     +       +E  +   
Sbjct: 311 EVERITHAKVGFAGPIGIDCPIIMDREVSYMKNFIVGANKSDHHIVNVNLQDFEVEMCAD 370

Query: 315 VMNEKQKPVVFGS-----------------------VGGGGRYDGLVSRFKGQNVPATGF 351
           +    +  V                              G  Y    +      +   G 
Sbjct: 371 IAQVHEGDVCPVCGAPLSFCKGIEVGNTFKLGNKYAKALGLEYLDANNTLHPVEMGCYGL 430

Query: 352 SIGISRLIVALKSLE----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            +  +   +  +  +        ++      ++     D + +       + L+  G   
Sbjct: 431 GLERTLASIVEQHHDDDGIIWPLSVAPYQVAIVIVSMKDEEQVRIANELYETLKAEGYDV 490

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            +     +  G + K  +    P  I  G    ++G ++++     +     I+N  ++ 
Sbjct: 491 LLDDRKER-PGVKFKDMELIGIPYRITVG-RGIAQGNVELRARGAHENEEVAIENVVTYL 548

Query: 468 EARVA 472
           + ++ 
Sbjct: 549 QNKLQ 553


>gi|156847287|ref|XP_001646528.1| hypothetical protein Kpol_1055p25 [Vanderwaltozyma polyspora DSM
            70294]
 gi|156117206|gb|EDO18670.1| hypothetical protein Kpol_1055p25 [Vanderwaltozyma polyspora DSM
            70294]
          Length = 1667

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 65/474 (13%), Positives = 151/474 (31%), Gaps = 53/474 (11%)

Query: 20   TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
                 +R++++  +  I+  +G        +E ++    F       N+ V+ + D  G 
Sbjct: 1044 PFGQILRSKMIQEVICIFRKHGG-------VENNEPPRIFPKAPIYSNQNVYEVLDKGGT 1096

Query: 80   WISLRYDLTAPLARYVAENFDTIVFPCRTY--RIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
             + L+YDLT P+ARY+++N + +    R       P        P +F +     +    
Sbjct: 1097 VLQLQYDLTYPMARYLSKNPNCVSKQYRFQHVYRPPQNLKSTLEPRKFGEIDFDIISQTS 1156

Query: 138  SSAETADAEMCMMMADTLEAVGIK-RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
            S +   DAE   ++ + L  + +  +++    +N+  ILD +     +    +     I+
Sbjct: 1157 SDSPFHDAETIRIIDEILTVLPVFEKSNAFFIMNHADILDSVFNFANIDKAQRPIVSRIL 1216

Query: 197  LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKSMHEL 255
             +                      D   D     N++S  ++ +  F   +D + + + L
Sbjct: 1217 SQVG--------------FARSFKDIKNDLKTQLNISSTSLNDLELFDFKLDFDSAKNRL 1262

Query: 256  YELVKGTIAGEKGFNELV---VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            ++++  +    K    L+    +   ++      N +    +      Y  G +Y+A+  
Sbjct: 1263 HKVMIDSPHLRKIDESLLYITKVLNFLKPFEVTRNVVISPLSNYNSAFYKGGIMYQAVY- 1321

Query: 313  FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA----------- 361
                N                +             A GF++    +              
Sbjct: 1322 DDGTNRNLVAAGGRYDSLISYFARPSDEKSNIVQRAVGFNLAWETIFGVGQNFFKLGGGS 1381

Query: 362  -LKSLESSTNN---IKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKN 416
             LK       +     +     +      +  L+         L   GI A+M L +  +
Sbjct: 1382 KLKKRNKYLKDTAVDWKPRRCDVLISSFSNPLLNTIGVNILNQLWKKGINADM-LRNCNS 1440

Query: 417  FGNQLKYADRRNCPLAIIQGTGERS----RGML---QIKDLAKGKELSREIKNN 463
              + +  A R      I+      +           ++K L    ++  ++   
Sbjct: 1441 IEDVVSGAQRDGVDWIILVKQQSYAVTGHNRKFKPLKVKRLTTNTDIDMDLDEF 1494


>gi|134301543|ref|YP_001121511.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166980125|sp|A4IWT9|SYP_FRATW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134049320|gb|ABO46391.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 565

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 55/538 (10%), Positives = 143/538 (26%), Gaps = 78/538 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R+     G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IK 161
             R        F                     M     + L+ +G            I 
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYATYCNILDKIGLAYRPVKADTGAIG 203

Query: 162 RNDYHIGINNRKILDGILEK-----------IGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
            ++ H         + I+             +  +    L++R+     I+K+    ++ 
Sbjct: 204 GDNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKPDLSKRVNSQNTIEKIHTPNIKT 263

Query: 211 VKLLLGEGRTDNSGDFTK-----------------GANLTSEQIDIMVSFLSIDLEKSMH 253
           ++ L  E   D                           L   +I+ +   ++     +  
Sbjct: 264 IEKLCKEMSFDIKKTIKTMVIKDAGGNFFALVIRGDHELNETKINKLDQIIAPYTLATKE 323

Query: 254 ELYELVKGTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E++ +          +        +   +    +       +    +    R +  Y   
Sbjct: 324 EIFSIFNANPGSLGIYNCPISIIADYSAIAITDLVCGANEDDYHFTNVNWDRDVTNYQIA 383

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKG------QNVPATGFS 352
               ++   +  + +  +   +    G        Y   ++          + +    + 
Sbjct: 384 DIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCYG 443

Query: 353 IGISRLIVALKSL---ESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGI 405
            G+SR++ A       E+     + + P  +  +                  Q L   GI
Sbjct: 444 FGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKIKEVADKLYQDLLGDGI 503

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +    ++  G     AD       ++ G     +G+++ K+    ++    I   
Sbjct: 504 DVLLDDRGAR-PGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAEL 560


>gi|332678669|gb|AEE87798.1| Prolyl-tRNA synthetase Bacterial type [Francisella cf. novicida
           Fx1]
          Length = 565

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 55/538 (10%), Positives = 143/538 (26%), Gaps = 78/538 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R+     G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IK 161
             R        F                     M     + L+ +G            I 
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYATYCNILDKIGLAYRPVKADTGAIG 203

Query: 162 RNDYHIGINNRKILDGILEK-----------IGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
            ++ H         + I+             +  +    L++R+     I+K+    ++ 
Sbjct: 204 GDNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKPDLSKRVNSQNTIEKIHTPNIKT 263

Query: 211 VKLLLGEGRTDNSGDFTK-----------------GANLTSEQIDIMVSFLSIDLEKSMH 253
           ++ L  E   D                           L   +I+ +   ++     +  
Sbjct: 264 IEKLCKEMSFDIKKTIKTMVIKDAEGNFFALVIRGDHELNETKINKLEQIVAPYTLATKE 323

Query: 254 ELYELVKGTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E++ +          +        +   +    +       +    +    R +  Y   
Sbjct: 324 EIFSIFNANPGSLGIYNCPISIIADYSAIAITDLVCGANEDDYHFTNVNWDRDVTNYQIA 383

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKG------QNVPATGFS 352
               ++   +  + +  +   +    G        Y   ++          + +    + 
Sbjct: 384 DIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCYG 443

Query: 353 IGISRLIVALKSL---ESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGI 405
            G+SR++ A       E+     + + P  +  +                  Q L   GI
Sbjct: 444 FGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDGI 503

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +    ++  G     AD       ++ G     +G+++ K+    ++    I   
Sbjct: 504 DVLLDDRGAR-PGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAEL 560


>gi|320529253|ref|ZP_08030345.1| prolyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138883|gb|EFW30773.1| prolyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 570

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 67/252 (26%), Gaps = 17/252 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I   IR   +  G   I  P+L+ ++ L +           +  +
Sbjct: 38  GMYTYLPLAWRTLRKIEQIIREEMDAAGGQEIMMPILQPAE-LWEESGRWGAYGAEMMRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR------IGPVFRNEKHGPGR 124
           QD   +   L     ++   L R    ++  +       +        P F   +     
Sbjct: 97  QDRHERAFCLGPTHEEMITALVRDELRSYKQLPVMLYQIQDKFRDERRPRFGVMRSREFI 156

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            +     D D  G                T   +  +  +   G       +        
Sbjct: 157 MQDLYSFDKDVEGMHESYRKMYEAYTNVFTRCGLNFRAVEADCGAIGGGRSEEFTVLAPE 216

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                         A D+  +     ++ L      +   +     + +   I ++  FL
Sbjct: 217 GESRIACCDACSYAASDEKAQ-----LRPLDAPDEAELPLEKVSTPHTS--TIALLAEFL 269

Query: 245 SIDLEKSMHELY 256
            I +EK++  + 
Sbjct: 270 KIPVEKTIKAVA 281



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 1/88 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++       + L+  +   + LR AGI   +     +  G +    D 
Sbjct: 464 IWPRAIAPYEVVVVAVNAKVEEQLAYAEEIYEELRAAGIDVLLDDRRERA-GVKFNDCDL 522

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              P+ I  G      G +++K    G+
Sbjct: 523 IGYPVRIAIGPKTIENGSIEVKLRRTGE 550


>gi|167040680|ref|YP_001663665.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|307724045|ref|YP_003903796.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166854920|gb|ABY93329.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|307581106|gb|ADN54505.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 634

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +  +G+  I+TP++   + L +     D   + ++  
Sbjct: 260 GFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEE-LWRRSGHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAPLA 92
            + DG+  +++        
Sbjct: 318 TEIDGETYAIKPMNCPGAM 336



 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  Q     L    IRAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELD-DRNEKVGYKIREAQLQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E  +G + ++   +G   +  +          +A
Sbjct: 592 IVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKEIA 630


>gi|149914033|ref|ZP_01902565.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           AzwK-3b]
 gi|149812317|gb|EDM72148.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           AzwK-3b]
          Length = 361

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 107/331 (32%), Gaps = 38/331 (11%)

Query: 36  IYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYV 95
           ++E  G  P+ET +L+ ++ L     ++ R    V S      Q   LR D T P+   V
Sbjct: 17  VFEAEGAQPVETTVLQPAEVLLDLYGEDMRARAYVTSDALRGEQM--LRPDFTVPV---V 71

Query: 96  AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL 155
             +      P      G VFR ++  P R  +++Q   +    +A  A       M    
Sbjct: 72  QMHMAHGAEPACYTYSGEVFRRQEDDPDRANEYMQVGFELFDRTAPEAADARVFCMIFKA 131

Query: 156 ---EAVGIKRNDYHIGINNRKILD-------GILEKIGLHGDDKLNERLIVLRAIDKLDK 205
                +     D  + +     L         +L  I      +        R      +
Sbjct: 132 LEPLDLRAATGDIGLLMAAVGGLRTTEARKKALLRHIWRPRRFRALMDRYSGRVPVPESR 191

Query: 206 FGLQGVKLLLGE--------------GRTDNSGDFTKGANLTSEQIDIMVSFLSID--LE 249
             L      + E               R +   +  + A ++ +++ ++ + L++    +
Sbjct: 192 AALLAKAEPMAEAGPMIGMRSEAEILSRINALQEDAQVAPISDDEVALIDAILAVRETSD 251

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
            ++  L ++     A +   + L    E +   G +   +   ++  R          E 
Sbjct: 252 NALERLRDIAVDMGAIQPAVDRLARRLEAMAGRGLDITTLDFEASYGR-------TNMEY 304

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
             GF      +K      V  GGRYD L  +
Sbjct: 305 YDGFVFGFYAEKRPDLPPVATGGRYDALTRQ 335


>gi|56708459|ref|YP_170355.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670930|ref|YP_667487.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457616|ref|ZP_03666089.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254371083|ref|ZP_04987085.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875304|ref|ZP_05248014.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|81820763|sp|Q5NF37|SYP_FRATT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123359400|sp|Q14GJ0|SYP_FRAT1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56604951|emb|CAG46045.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110321263|emb|CAL09428.1| Prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569323|gb|EDN34977.1| hypothetical protein FTBG_00840 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841303|gb|EET19739.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159660|gb|ADA79051.1| prolyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 565

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 55/538 (10%), Positives = 143/538 (26%), Gaps = 78/538 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R+     G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IK 161
             R        F                     M     + L+ +G            I 
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYATYCNILDKIGLAYRPVKADTGAIG 203

Query: 162 RNDYHIGINNRKILDGILEK-----------IGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
            ++ H         + I+             +  +    L++R+     I+K+    ++ 
Sbjct: 204 GDNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKSDLSKRVNSQNTIEKIHTPNIKT 263

Query: 211 VKLLLGEGRTDNSGDFTK-----------------GANLTSEQIDIMVSFLSIDLEKSMH 253
           ++ L  E   D                           L   +I+ +   ++     +  
Sbjct: 264 IEKLCKEMSFDIKKTIKTMVIKDAGGNFFALVIRGDHELNETKINKLDQIIAPYTLATKE 323

Query: 254 ELYELVKGTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E++ +          +        +   +    +       +    +    R +  Y   
Sbjct: 324 EIFSIFNANPGSLGIYNCPISIIADYSAIAITDLVCGANEDDYHFTNVNWDRDVTNYQIA 383

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKG------QNVPATGFS 352
               ++   +  + +  +   +    G        Y   ++          + +    + 
Sbjct: 384 DIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCYG 443

Query: 353 IGISRLIVALKSL---ESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGI 405
            G+SR++ A       E+     + + P  +  +                  Q L   GI
Sbjct: 444 FGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKIKEVADKLYQDLLGDGI 503

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +    ++  G     AD       ++ G     +G+++ K+    ++    I   
Sbjct: 504 DVLLDDRGAR-PGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAEL 560


>gi|34763882|ref|ZP_00144786.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886345|gb|EAA23616.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 175

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 46/141 (32%), Gaps = 6/141 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + +R   +  G   +  P+++ ++ L +     D  
Sbjct: 35  MIKKLASGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 93

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 94  GPEMLRLKDRHERDFVLSPTQEEMITAIVRSDISSYKSLP--INLYHIQTKFRDERRPRF 151

Query: 124 RFRQFIQCDVDNVGSSAETAD 144
              +      +        + 
Sbjct: 152 GLMRGRGIYYERCLFFPYFSR 172


>gi|115522897|ref|YP_779808.1| ATP phosphoribosyltransferase regulatory subunit [Rhodopseudomonas
           palustris BisA53]
 gi|115516844|gb|ABJ04828.1| ATP phosphoribosyltransferase regulatory subunit [Rhodopseudomonas
           palustris BisA53]
          Length = 387

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 126/368 (34%), Gaps = 54/368 (14%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           D++ N +   G+      +L+ ++       ++ R  K ++   D  G+ + LR DLT P
Sbjct: 17  DALLNSFGQAGYQHARPAILQPAEPFLDLSGEDIR--KSLYLTTDPGGEELCLRPDLTIP 74

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA---EM 147
           +AR           P     +GPVFR     P  F Q           +A  A+     +
Sbjct: 75  VARDYLA-SPQAGAPAGFSYLGPVFRYRGGKPSEFLQAGVESFGRQDRAAADAEMLALAL 133

Query: 148 CMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK-----LNERLIVLRAIDK 202
             +    L  V I+  D  +       LD           D      L + L  L     
Sbjct: 134 QAIGTFGLTNVDIRTGDVALFTALLDALDLFPVWRRRLIKDFNRKVSLAQDLEQLTLATA 193

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGA------------------------------NL 232
            ++   +GV   L       +                                      L
Sbjct: 194 TNRNEYEGVLAALAGSDRKAALALVTDLMSIAGATTLGGRAVAEIADRFLEQSTLKGGAL 253

Query: 233 TSEQIDIMVSFLSIDL--EKSMHELYELVKGT-IAGEKGFNELVVISELVRKSGYNSNRI 289
             E ++ +  FL+I    ++++ +L  L     ++ +   ++       ++  G +    
Sbjct: 254 PREALNKLQRFLAIAGTPQEALKQLRALASDAQLSIDAAIDQFESRIGFMQSRGIDLAAT 313

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPA 348
           + S++  RG++YYTG  +E                   +  GGRYDGL+S+    Q +PA
Sbjct: 314 RFSTSFGRGVDYYTGFEFELHRKDNGDE---------PLVAGGRYDGLMSQLGAPQPIPA 364

Query: 349 TGFSIGIS 356
            GFSI I 
Sbjct: 365 VGFSIWIE 372


>gi|302389962|ref|YP_003825783.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase
           [Thermosediminibacter oceani DSM 16646]
 gi|302200590|gb|ADL08160.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase
           [Thermosediminibacter oceani DSM 16646]
          Length = 637

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/377 (13%), Positives = 106/377 (28%), Gaps = 16/377 (4%)

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE-TADAEMCMMMADTLEAVGIKR 162
                  +   +R E    G         ++          D     M    ++  G   
Sbjct: 272 GMVLWNTLIDFWRKEHQKRGYQEIKTPIILNEELWKRSGHWDHYKTNMYFTQIDGEGYAI 331

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN 222
              +           +     L    KL E  +V R        GL  V+        D+
Sbjct: 332 KPMNCPGGILVYKSDVHSYRELPL--KLAELGLVHRHELSGVLHGLMRVRS----FTQDD 385

Query: 223 SGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           +  +   + +  E ++++     I          E +        G +EL   +    K+
Sbjct: 386 AHIYMMPSQIEQEILEVINLADHIYRIFGFDYHVE-LSTRPENSMGPDELWERATAALKN 444

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
             +   +        G  Y     +   L   +    Q   +        R+D       
Sbjct: 445 ALDKKGLPYRINEGDGAFYGPKIDFH--LKDSIGRTWQCGTIQLDFMMPERFDLTYIGPD 502

Query: 343 GQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           G+              + R I  L    +    +  + P+ +  +      +   +  T 
Sbjct: 503 GEKHRPVMIHRTIFGSLERFIGILIEHYAGAFPVW-LAPIQVKVLPISEKFMDYARKVTA 561

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L  + IR E+    ++  G +++ A  +  P  +I G  E + G + ++   KG    +
Sbjct: 562 ELENSDIRVELD-ERNEKIGYKIREAQLQKIPYMLIVGEKEAAEGTVSVRVREKGDVGMK 620

Query: 459 EIKNNESWREARVAQIT 475
            +K+       R+    
Sbjct: 621 SLKDFIEEVTTRIKNKE 637



 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + + N ++D  R  ++  G+  I+TP++   + L K     D     ++  
Sbjct: 264 GFPFFHPKGMVLWNTLIDFWRKEHQKRGYQEIKTPIILNEE-LWKRSGHWDHYKTNMY-F 321

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 322 TQIDGEGYAIKPMNCPG 338


>gi|288561385|ref|YP_003424871.1| threonyl-tRNA synthetase ThrS [Methanobrevibacter ruminantium M1]
 gi|288544095|gb|ADC47979.1| threonyl-tRNA synthetase ThrS [Methanobrevibacter ruminantium M1]
          Length = 608

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 68/265 (25%), Gaps = 9/265 (3%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
             L      +   F        E+ D  V                + + T   E  + E 
Sbjct: 328 KRLRAFTMPDMHSFCADMPQALEEFDAQVDMCVQTGVDLDVNYEAIFRAT---EDFYEEN 384

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK-QKPVVFGSVGGG 331
               E   K       ++I                   LG P+ N   Q  V  G   G 
Sbjct: 385 KEWMEATAKRIGKPLLLEILPERKHYWSCKIDFAAIDYLGRPIENPTVQIDVESGKRFGI 444

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALK----SLESSTNNIKEMGPVLITTMDHDS 387
              D   +      +  +        +   L+        +      + P  +  +    
Sbjct: 445 EYIDEEENPQNPIILHCSPTGSVERVICSLLENTAKEDGKAPMLPTWLSPSQVRILPIGE 504

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
             L         +    IR ++     +  G +++ A +   P  I+ G  E    +  +
Sbjct: 505 KHLEYANQLADKIAAENIRVDLDNSDDR-VGKKIRSASKEWVPYIIVIGDKEVENDVYSV 563

Query: 448 KDLAKGKELSREIKNNESWREARVA 472
                G+++    +   +  +A+  
Sbjct: 564 TVRESGEKVDMTAEELIAEVKAKTE 588


>gi|259418062|ref|ZP_05741981.1| ATP phosphoribosyltransferase regulatory subunit [Silicibacter sp.
           TrichCH4B]
 gi|259346968|gb|EEW58782.1| ATP phosphoribosyltransferase regulatory subunit [Silicibacter sp.
           TrichCH4B]
          Length = 363

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 59/374 (15%), Positives = 121/374 (32%), Gaps = 49/374 (13%)

Query: 23  IRIRNRILDS---IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
           +  R++I      +R  +E  G   ++ PLL+ +D L     ++ R    V S      Q
Sbjct: 1   MPNRSQIEARAALLRQRFEVAGGVVVDPPLLQPADILLDLYGEDIRARAYVTSDALRGEQ 60

Query: 80  WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
              LR D T P    V  +      P R    G VFR ++H P R  +F+Q   +    +
Sbjct: 61  M--LRPDFTLP---MVQMHMKGGAEPARYTYAGQVFRRQEHDPDRANEFVQVGYEVFDRT 115

Query: 140 AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
                          L  + ++  +  +   +  IL   +E +      K   R  + R 
Sbjct: 116 DPADADAEVF----ALFQLQLRGLELRVATGDIGILLAAVEGLNTTEVRKSALRRHIWRP 171

Query: 200 IDKLDKFGL--------QGVKLLLG--------------------EGRTDNSGDFTKGAN 231
                            +  K LL                     + R +          
Sbjct: 172 RRFRALLDRFAGRTPMSESRKKLLSTTGPLTGTAPEIGKRRAAEIDARVETLRADAAAPP 231

Query: 232 LTSEQIDIMVSFLSID--LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           ++  +++ + + L++   +  ++ ++ ++     A     + L   +  ++  G   +++
Sbjct: 232 ISEHEMEALEALLAVRETVPYALEQMRDIAVDLPAILPALDRLEARTSAMKARGIAIDQL 291

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
              ++  R          E   GF      ++      +  GGRYD L       +    
Sbjct: 292 DFEASYGR-------TSMEYYDGFVFGFYAERRPDLPPIATGGRYDALTRYLGQGDEIPA 344

Query: 350 GFSIGISRLIVALK 363
              +    LI+ L+
Sbjct: 345 VGGVIRPDLILTLE 358


>gi|289812412|ref|ZP_06543041.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. AG3]
          Length = 51

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 1  MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS 55
          M K      +  RG  D    E  I  RI  +++N+  +YG+  I  P++E +  
Sbjct: 1  MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPL 51


>gi|284048337|ref|YP_003398676.1| threonyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952558|gb|ADB47361.1| threonyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 636

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + IRN ++D  R ++  YG+  + TP++     L +     D   + ++  
Sbjct: 263 GFPFFLPNGMIIRNTLIDYWREVHRKYGYQEVMTPMIMNRQ-LWETSGHWDHYKENMY-F 320

Query: 74  QDDDGQWISLRYDLTAP 90
              DG   +++      
Sbjct: 321 TQIDGDDYAIKPMNCPG 337



 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 1/94 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M          +     L    IRA +    ++  G +++ A  +  P  +I G  
Sbjct: 541 QVRVMPITDKYNEYAKQIVDKLEAQKIRAHLD-DRNEKVGYKIREAQVKKVPYMLIVGEK 599

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           E   G + ++    G++ +  +    +  +  + 
Sbjct: 600 EVESGTVSVRSRDNGEQGAMPVDEFIAKLQDEIK 633


>gi|255323684|ref|ZP_05364814.1| threonyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255299398|gb|EET78685.1| threonyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 606

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 82/262 (31%), Gaps = 7/262 (2%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D+S  F   + +  E I  ++ F    +E         +    A   G +E+   +
Sbjct: 348 EFAQDDSHIFCMPSQI-KENILEILKFAGKIMENFGFHYEMEISTKPAKAIGGDEIWETA 406

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGR 333
               K   + N  K       G  Y      +         +                G 
Sbjct: 407 TKALKEALDENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLGY 466

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    R +   +           + + ++                +  +      L   
Sbjct: 467 IDANNERQQPVMLHRALLGSFERFIGILIEHTGGELPFFVAPTQ--VVIVPISDAHLDYA 524

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + LR  G+ +E+    +++   +++ A+++  P+  + G  E +   + ++D    
Sbjct: 525 KTVAKELRKIGVDSEIA-SKNESLNKRIRTAEKQRVPMIAVLGDNEVANSAIALRDRTTR 583

Query: 454 KELSREIKNNESWREARVAQIT 475
           ++   ++       ++++A++T
Sbjct: 584 EQKDMKLDEFVGLLKSKLAEVT 605



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R+++   +   + + G++P+  P L  +D   K         + ++  
Sbjct: 232 GLPIWLPNGGRLRSKLEQILYKAHRDRGYEPVRGPELLKADV-WKKSGHYANYKENMY-F 289

Query: 74  QDDDGQWISLRYDLTAP 90
              D     ++      
Sbjct: 290 TTIDEAEYGIKPMNCVG 306


>gi|326391979|ref|ZP_08213481.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325991980|gb|EGD50470.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 634

 Score = 67.2 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +  +G+  I+TP++   + L +     D   + ++  
Sbjct: 260 GFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEE-LWRRSGHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAPLA 92
            + DG+  +++        
Sbjct: 318 TEIDGETYAIKPMNCPGAM 336



 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  Q     L    IRAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELD-DRNEKIGYKIREAQLQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E  +G + ++   +G   +  +          +A
Sbjct: 592 IVGDKEVEQGTVSLRSRKEGDLGAISLNEFIEKILKEIA 630


>gi|311894878|dbj|BAJ27286.1| putative threonyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 659

 Score = 67.2 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 44/133 (33%), Gaps = 20/133 (15%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R    L    +       + PV +T +    + +         L+  GIR E+     
Sbjct: 539 IERFFAVLLEHYAGAMP-PWLAPVTVTGIPITDEHVPYLLDVAAELKKHGIRVEVDTSDD 597

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +    +++ A +   P  +I G  +   G +  +    G++ +                 
Sbjct: 598 R-MQKKIRNAQKTKVPFMLIAGNDDVEAGAVSFRY-RSGEQKNG---------------- 639

Query: 475 TIPISELVSTVKK 487
            +P  E ++ + +
Sbjct: 640 -VPKDEAIAEIVE 651


>gi|300914721|ref|ZP_07132037.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561]
 gi|300889656|gb|EFK84802.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561]
          Length = 634

 Score = 67.2 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +  +G+  I+TP++   + L +     D   + ++  
Sbjct: 260 GFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEE-LWRRSGHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAPLA 92
            + DG+  +++        
Sbjct: 318 TEIDGETYAIKPMNCPGAM 336



 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  Q     L    IRAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELD-ERNEKVGYKIREAQLQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E  +G + ++   +G   +  +          +A
Sbjct: 592 IVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKEIA 630


>gi|167769368|ref|ZP_02441421.1| hypothetical protein ANACOL_00694 [Anaerotruncus colihominis DSM
           17241]
 gi|167668336|gb|EDS12466.1| hypothetical protein ANACOL_00694 [Anaerotruncus colihominis DSM
           17241]
          Length = 635

 Score = 67.2 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  ++ +G+  I TPL+   +   +     D     +++ 
Sbjct: 261 GFPFFFPKGMILRNLLESFWREEHQKHGYQEIRTPLILNEELWHRS-GHWDHYKDNMYTT 319

Query: 74  QDDDGQWISLRYDLTAP 90
           +  D +  +++      
Sbjct: 320 KI-DDRDYAIKPMNCPG 335



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  +    + +   Q     L  AG+R E+    ++  G +++ A  +  P  +
Sbjct: 534 WLAPVQIKVLPVTDEHIPYAQSVADTLTRAGLRIELD-SRNEKVGYRIREAQLQKIPYML 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E   G + ++D   GK  +  + +     +  V 
Sbjct: 593 VLGGKEAESGEVAVRDRRDGKTTTMLLADFVEKMKTEVE 631


>gi|307266242|ref|ZP_07547784.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918772|gb|EFN49004.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 634

 Score = 67.2 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +  +G+  I+TP++   + L +     D   + ++  
Sbjct: 260 GFPFFHPKGMIIRNILEDFWRKEHIKHGYQEIKTPIILNEE-LWRRSGHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAPLA 92
            + DG+  +++        
Sbjct: 318 TEIDGETYAIKPMNCPGAM 336



 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  Q     L    IRAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVRVLPISDKHYAYAQHVYGRLLENDIRAELD-DRNEKIGYKIREAQLQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E  +G + ++   +G   +  +          +A
Sbjct: 592 IVGDKEVEQGTVSLRSRKEGDLGAISLNEFIEKILKEIA 630


>gi|254467091|ref|ZP_05080502.1| tRNA synthetase, class II [Rhodobacterales bacterium Y4I]
 gi|206687999|gb|EDZ48481.1| tRNA synthetase, class II [Rhodobacterales bacterium Y4I]
          Length = 362

 Score = 67.2 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 55/375 (14%), Positives = 116/375 (30%), Gaps = 49/375 (13%)

Query: 23  IRIRNRILDSIRNI---YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
           + +R+ I      +   +E  G   ++TPLL+ + +L     ++ R    V +      Q
Sbjct: 1   MTLRSDIQARAAQLRVRFEAAGAQVVDTPLLQPAGTLLDLYGEDIRARAYVTTDALRGEQ 60

Query: 80  WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
              LR D T P+      +      P R    G VFR ++H P R  +++Q   +    +
Sbjct: 61  M--LRPDFTVPVVEA---HMRHGAEPARYTYSGEVFRRQEHFPDRPNEYLQVGYEVFERN 115

Query: 140 AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR- 198
              A          +L A+ ++         +  IL   ++ +      K      + R 
Sbjct: 116 DAAAADAEVF----SLFALQVRGLPLRAATGDIGILMAAVQGLNTTEKRKAALMRHIWRP 171

Query: 199 ------AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK-- 250
                       +  +   +  L     D +G   +     + ++   V  L  D +   
Sbjct: 172 RRFRSLLDRFAGRAPVPESRRKLLSTEGDLTGSAVELGKRRAAEVQARVEALREDAKAPP 231

Query: 251 ---------------------SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                                ++ +++++           + L   +  ++  G +   +
Sbjct: 232 IAEHELLALEALMAVRETVPYALEQMHDIAVDLPQINPALDRLDARTAAMKARGVDVENL 291

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
              ++  R          E   GF      +       V  GGRYD L  +         
Sbjct: 292 DFEASYGR-------TSMEYYDGFVFGFYAEARPDLPPVASGGRYDALTRQLGDGAEIPA 344

Query: 350 GFSIGISRLIVALKS 364
              +    L++ L+ 
Sbjct: 345 VGGVLRPDLMLQLEE 359


>gi|298346881|ref|YP_003719568.1| threonyl-tRNA synthetase [Mobiluncus curtisii ATCC 43063]
 gi|298236942|gb|ADI68074.1| threonyl-tRNA synthetase [Mobiluncus curtisii ATCC 43063]
          Length = 669

 Score = 67.2 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 44/122 (36%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     LR   +R E+     + FG +++ A +   P  +
Sbjct: 567 WLAPVQVRLVPVAEAFNDYCEDIANRLRAENVRVEVDTTDDR-FGKKIRNAAKDKIPFTL 625

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +     +  +    G++ +                  +PI + ++ + ++++  +
Sbjct: 626 IAGGEDAEANAVSFRY-RGGEQKNG-----------------VPIDQAIAEILEVIRSRR 667

Query: 494 EE 495
            +
Sbjct: 668 ND 669


>gi|315656661|ref|ZP_07909548.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492616|gb|EFU82220.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 669

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 44/122 (36%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     LR   +R E+     + FG +++ A +   P  +
Sbjct: 567 WLAPVQVRLVPVAEAFNDYCEDIANRLRAENVRVEVDTTDDR-FGKKIRNAAKDKIPFTL 625

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +     +  +    G++ +                  +PI + ++ + ++++  +
Sbjct: 626 IAGGEDAEANAVSFRY-RGGEQKNG-----------------VPIDQAIAEILEVIRSRR 667

Query: 494 EE 495
            +
Sbjct: 668 ND 669


>gi|304389414|ref|ZP_07371377.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304327224|gb|EFL94459.1| threonine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 669

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 44/122 (36%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     LR   +R E+     + FG +++ A +   P  +
Sbjct: 567 WLAPVQVRLVPVAEAFNDYCEDIANRLRAENVRVEVDTTDDR-FGKKIRNAAKDKIPFTL 625

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +     +  +    G++ +                  +PI + ++ + ++++  +
Sbjct: 626 IAGGEDAEANAVSFRY-RGGEQKNG-----------------VPIDQAIAEILEVIRSRR 667

Query: 494 EE 495
            +
Sbjct: 668 ND 669


>gi|160871539|ref|ZP_02061671.1| threonyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120338|gb|EDP45676.1| threonyl-tRNA synthetase [Rickettsiella grylli]
          Length = 642

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 55/442 (12%), Positives = 118/442 (26%), Gaps = 89/442 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +  RI   IR+  +   +  I+TP L  +  L +     D+  K +F+ 
Sbjct: 261 GMVFWHPRGWTVYQRIEQYIRSCLKKAAYQEIQTPQL-LARQLWEKSGHWDKFFKEMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             ++    +++             +        ++YR  P+   E               
Sbjct: 320 VTEN-TEFAIKPMSCPG-------HIQIFNQGIKSYRDLPLRLAE--------------- 356

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                       E    +   L   G  ++D HI     +I   +   I L         
Sbjct: 357 -----FGSCHRNEPSGALHGLLRVRGFVQDDGHIFCTEDQIQSEVSAFIDL--------- 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +    FG   V L L         +   G+N + ++ +  ++ L++D  K + 
Sbjct: 403 -----LYNVYADFGFNDVILKLA-----TRPEARVGSNASWDKAEKALA-LALDARKGLE 451

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
             Y   +G   G K    L      + + G       +                      
Sbjct: 452 WTYAHGEGAFYGPKIEFSLKDSLNRIWQCGTLQVDFSMPQR------------------- 492

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    +    R     +           + + ++          
Sbjct: 493 ---------------LGAEYVNERGERHVPVMLHRAILGSIERFIGILIEHYAGHFPLWL 537

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLA 432
               +    M          +   Q L    +R ++ L + K +F   ++    +  P  
Sbjct: 538 APTQI--VIMTITDKQHHYAKEIAQELEALALRVKLDLRNEKISFK--IREHSLQKIPYQ 593

Query: 433 IIQGTGERSRGMLQIKDLAKGK 454
           ++ G  E +   + ++    G 
Sbjct: 594 LVIGDQEVASKQVTVR-RQTGD 614


>gi|229825632|ref|ZP_04451701.1| hypothetical protein GCWU000182_00994 [Abiotrophia defectiva ATCC
           49176]
 gi|229790195|gb|EEP26309.1| hypothetical protein GCWU000182_00994 [Abiotrophia defectiva ATCC
           49176]
          Length = 350

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 68/395 (17%), Positives = 148/395 (37%), Gaps = 58/395 (14%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN-KGVFSLQDDDGQWISLRYDL 87
           I   ++ +YE YG+   +    E  +    ++ ++D  N   + +  D DG+ ++L+ D+
Sbjct: 2   INKELKTLYEGYGYKRFKMSKFEPYEL---YIENKDFLNTNQIITFTDLDGELLALKPDV 58

Query: 88  TAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM 147
           T  +         + V   R Y    ++R        F++  Q  ++ +G     A+AE+
Sbjct: 59  TLSI-------MKSGVGRGRIYYNENIYR---PKDRHFKEIKQSGIEYIGKLTTYAEAEV 108

Query: 148 CMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFG 207
             + A +L+  G   ND  I I++  +L  I E + L         L   R     +   
Sbjct: 109 IALAAKSLKLFG---NDIRIRISDVSMLSEIFENLALPE-------LTGNRIFQLFESKN 158

Query: 208 LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK 267
             G+ +L+ EG+ D+            +  +I+  +L ++   ++ E    ++     ++
Sbjct: 159 TAGLDILVNEGKLDSKAA--------EKLKEILNLYLPLEEGVNVLESKGFIENATHIKE 210

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
               L                I +  +++  ++YY G +++               +  +
Sbjct: 211 LVKALKAF--------NVLENIYLDFSLINSMDYYNGIIFQ----------GAVSGIPFT 252

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V  GGRYD L  +         G  +G     + L  +E+      +     +   D   
Sbjct: 253 VLSGGRYDKLAEK--------MGKEVGAVGFALDLSLIENYKEERDKYDVDYLIIFDEAE 304

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           D ++K     + L   G R ++   S +    +++
Sbjct: 305 DEITKAVNKVEELIEKGYRVQLAEKSEEEMAKRIR 339


>gi|45658307|ref|YP_002393.1| threonyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798553|sp|Q72PK6|SYT_LEPIC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|45601549|gb|AAS71030.1| threonyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 638

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 2/90 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K   + N + + +R+     G+  I+TP +  S+ L K     D  ++ ++  
Sbjct: 265 GFPFWHPKGTILWNSLAEYLRSECNKRGYQEIKTPAVLSSE-LWKKSGHWDNFHENMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIV 103
            D D +  +L+       +     +  +  
Sbjct: 323 TDIDEEDYALKPMNCPGCSLIYKHHLHSYR 352



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 64/232 (27%), Gaps = 8/232 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +     L SE +DI+    ++  +    E    +       +G +E    +    
Sbjct: 385 DDSHIYAPLDYLESEVMDIIDFTFTVYKKFGFSEFKTFIATRPEKSQGKDEDWEFATSTL 444

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           K       I        G  Y     +        + +    +                 
Sbjct: 445 KQSLEKKGIPYGIKEGEGAFYGPKIEFNIKDSIGRLWQCG-TIQVDFSMPERFDLDYTDS 503

Query: 341 FKGQNVPATG----FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
              +  P       +      + + ++  E           + I T+          +  
Sbjct: 504 DGQKKRPVMIHRAIYGSLERFIGILIEHYEGKFPLWISPNQIRILTV--TEKVTDYAKNV 561

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            + L  +G R E+    ++  G +++ +  +     +I G  E     L ++
Sbjct: 562 YRELLDSGFRVELD-TRNEKIGAKIRDSILKKANYLLILGEKEMESNTLAVR 612


>gi|306825714|ref|ZP_07459053.1| threonine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432075|gb|EFM35052.1| threonine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 647

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/396 (11%), Positives = 108/396 (27%), Gaps = 42/396 (10%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    I    +     P+   E +         + D+       +  +  +  M  
Sbjct: 279 RYIVDK--EIAAGYQHVYTPPIASVELYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIE 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG-EKGFNE 271
               +       D  +  NLT  +    +S+   + +    +  E+ +      +   ++
Sbjct: 397 EEF-KKILQLIIDVYEDFNLTDYRF--RLSYRDPEDKHKYFDNDEMWENAQRMLKAAMDD 453

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           +    +     G  +         V+        +    L F +                
Sbjct: 454 ME--LDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL---------- 501

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
            +Y G         +   G    + R    L                +      +   + 
Sbjct: 502 -KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVD 560

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKD 449
                 + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++ 
Sbjct: 561 YAWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR- 616

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                            R  +    T+P+ E V+ +
Sbjct: 617 -----------------RYGQKETQTVPVDEFVAAI 635



 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|21674935|ref|NP_663000.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|34222753|sp|Q8KAN0|SYT_CHLTE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21648164|gb|AAM73342.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 657

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    +     +     L  AGIR E+ L S K  G +++ A+    P  +
Sbjct: 557 WLAPVQAVVLPIAEEVHDYAREVYAKLHEAGIRTELDLRSEK-IGKKIREAELSKIPAML 615

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           + G  E+ +G + ++   KG E S  +   
Sbjct: 616 VIGRNEQEKGEVSLRRHRKGDEGSFGVDEL 645



 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 76/269 (28%), Gaps = 12/269 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+  G          IRN +   ++      G+ P+ TP +   +   +        
Sbjct: 266 LTPEVGSGLPIWLPNGAIIRNELETFLKAEQRKRGYVPVYTPHIGNIELYKRSGHYPYYS 325

Query: 67  NKGV--FSLQDDDGQW--ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +      + +D+ G+     L+             +        R+YR  P+   E    
Sbjct: 326 DSQFPPLTYKDETGREEQYLLKPMNCP-------HHHLIYSQTLRSYRDLPIRLTEFGTV 378

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            R  Q  + +   V +   T D        D L        D    + N    D +  ++
Sbjct: 379 YRHEQSGELN-GLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTRFVFNTLGFDEVETRL 437

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            LH  +  ++         + +K   +    +  +           G  +     D +  
Sbjct: 438 SLHDPENQSKYGGTAEVWGQAEKDVKEAADRMGIKYFIGIGEASFYGPKIDFIVRDAIGR 497

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNE 271
              +   +  + + E    +  G  G   
Sbjct: 498 KWQLGTVQVDYVMPERFDLSYIGSDGQKH 526


>gi|325663512|ref|ZP_08151922.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325470411|gb|EGC73642.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 564

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 56/564 (9%), Positives = 137/564 (24%), Gaps = 103/564 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK+        G         R+  +I + +R   +  G   +  P +   +   K  
Sbjct: 31  MIKKSS------SGIYMIMPMGKRVLKKIEEIVREEMDAAGAQELLMPAMIPEEIYEKS- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +     +F+L+D   +   L     +L             +                
Sbjct: 84  GRREAFGSNMFALKDRYQKNYVLGPTHEEL---FTMAAMMKGSSYKDFPYNLYQIQTKFR 140

Query: 118 EKHGPGR---------FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR------ 162
           ++  P            +     D+D  G                    +  K       
Sbjct: 141 DETRPRYGLIRVREFIMKDAYSFDIDEAGLHESYMKMFHAYQNIMERCKLNYKIVKADTG 200

Query: 163 -----------------NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
                             D  +  +       +     +   +  +    V+  ++  + 
Sbjct: 201 AMGGSLSEEFQAITDIGEDVIVTCDGCDFSSNLEITEVIDASEPSDAEEQVMEVVETPNA 260

Query: 206 FGLQGVKLLLGEGRTD-----------NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
             ++ V     +   +            +  F    N    +  ++    + ++E +  E
Sbjct: 261 RTMEEVAAFFHKSVNEFVKTLIYTVDGKTMAFLLKGNRELNETKVLKFLKANEMELAPFE 320

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             E V     G  G   L     + R+     N I  ++     +       +E  +   
Sbjct: 321 EVERVTHAKVGFAGPVGLECPIVMDREVTNMKNFIVGANKTDHHIVNVNLKDFEVEIVAD 380

Query: 315 VMNEKQKPVVFGS-----------------------VGGGGRYDGLVSRFKGQNVPATGF 351
           +    +  +                              G  Y  + ++     +   GF
Sbjct: 381 IAQVHEGDICPVCGKPLKFCKGIEVGNTFKLGTKYAKTLGLEYQDVDNKLHPVEMGCYGF 440

Query: 352 SIGISRLIVALKSLE----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            +      +  +  +        ++      ++     D + +       + L+  GI  
Sbjct: 441 GLERCMAAIVEQHNDEAGIIWPASVAPFEVAVVVVSSKDEEQMRIGNELYEALKKEGIDV 500

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            +     +  G + K  +    P  I  G      G ++ +                   
Sbjct: 501 LLDDRKER-PGVKFKDMELIGIPYRITVG-RGIQEGKVEFR------------------A 540

Query: 468 EARVAQITIPISELVSTVKKILQE 491
                   I + E++  VK+ LQ+
Sbjct: 541 RTAAENREIALDEVIKLVKEELQK 564


>gi|254303428|ref|ZP_04970786.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323620|gb|EDK88870.1| proline--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 567

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + +R   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GAEMLRLKDRHERDFVLSPTQEEMITAIIRSDISSYKSLP--INLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFTMKDAYSFH 164



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/334 (11%), Positives = 106/334 (31%), Gaps = 32/334 (9%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +   ++ + + + +  +  +          D++    ++G    + E +  N  + 
Sbjct: 254 VHTPDCPTIESLAKYLDVPLERTVKALTYKDMGTDEIYLVLIRG-DFEVNEVKLKNILNA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMATDEEIEKLGLKKGYIGPYKLPTKIKIVAD-LSVPEISNHIVGSHQKDYHYKNVN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF-K 342
           Y  +      T +R  +    C+    L      E  +    G           +    K
Sbjct: 372 YGRDYTADIVTDIRTAKVGENCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDENGK 431

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK------YQMY 396
            Q +    + IG++R + A     +  N I     +    +D    ++         +  
Sbjct: 432 TQYMLMGCYGIGVTRTMAAAIEQNNDENGIIWPVSIAPYIVDVIPANIKNEVQVNLAEKI 491

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L    I + +     +  G + K AD    P  ++ G      G++++K    G+  
Sbjct: 492 YNELEEEKIDSMLD-DRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVELKIRRTGE-- 547

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                            + +  +E+++ +K++++
Sbjct: 548 ----------------TLEVSENEVIAKIKELMK 565


>gi|24213940|ref|NP_711421.1| threonyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|59798590|sp|Q8F6R1|SYT_LEPIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24194795|gb|AAN48439.1|AE011305_9 threonyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 638

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 2/90 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K   + N + + +R+     G+  I+TP +  S+ L K     D  ++ ++  
Sbjct: 265 GFPFWHPKGTILWNSLAEYLRSECNKRGYQEIKTPAVLSSE-LWKKSGHWDNFHENMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIV 103
            D D +  +L+       +     +  +  
Sbjct: 323 TDIDEEDYALKPMNCPGCSLIYKHHLHSYR 352



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 64/232 (27%), Gaps = 8/232 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +     L SE +DI+    ++  +    E    +       +G +E    +    
Sbjct: 385 DDSHIYAPLDYLESEVMDIIDFTFTVYKKFGFSEFKTFIATRPEKSQGKDEDWEFATSTL 444

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           K       I        G  Y     +        + +    +                 
Sbjct: 445 KQSLEKKGIPYGIKEGEGAFYGPKIEFNIKDSIGRLWQCG-TIQVDFSMPERFDLDYTDS 503

Query: 341 FKGQNVPATG----FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
              +  P       +      + + ++  E           + I T+          +  
Sbjct: 504 DGQKKRPVMIHRAIYGSLERFIGILIEHYEGKFPLWISPNQIRILTV--TEKVTDYAKNV 561

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            + L  +G R E+    ++  G +++ +  +     +I G  E     L ++
Sbjct: 562 YRELLDSGFRVELD-TRNEKIGAKIRDSILKKANYLLILGEKEMESNTLAVR 612


>gi|91978578|ref|YP_571237.1| ATP phosphoribosyltransferase regulatory subunit [Rhodopseudomonas
           palustris BisB5]
 gi|91685034|gb|ABE41336.1| ATP phosphoribosyltransferase regulatory subunit [Rhodopseudomonas
           palustris BisB5]
          Length = 385

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 68/370 (18%), Positives = 122/370 (32%), Gaps = 55/370 (14%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           +++   +   G+   E  +L+ ++       ++ R  K ++   D  G+ + LR DLT P
Sbjct: 17  EALLQSFTKAGYVRAEPAILQPAEPFLDLSGEDIR--KNLYLTTDGSGEELCLRPDLTIP 74

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
           +AR           P     +GPVFR     P  F Q           +A  A+     +
Sbjct: 75  VARDYLA-SPGAGQPTGFCYLGPVFRQRSGKPSEFLQAGIESFGRQDRAAADAEMLALGL 133

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL-- 208
            A T   VG   +     +     L   L    +     + +    +     L++  L  
Sbjct: 134 EATTAFGVGE-VDIRTGDVALFSALIDALGLYPVWRRRLMKDFNRKVSLAQDLERLTLAT 192

Query: 209 ------QGVKLLLGEGRTDNSGDFTKGA------------------------------NL 232
                 +GV   L       +                                      L
Sbjct: 193 SGGNEYEGVLAALAGSDRKAALALVTDLMSIAGATTLGGRSVAEIADRFLEQSTLKSGAL 252

Query: 233 TSEQIDIMVSFL--SIDLEKSMHELYELVKGT-IAGEKGFNELVVISELVRKSGYNSNRI 289
             + +  +  FL  S D  +++ +L  L     +A E   ++       +   G +  + 
Sbjct: 253 PRDALQKIQRFLAISGDPNEALTQLRALAADAKLAIEPAIDQFESRIGFMAARGIDLKKT 312

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG-LVSRFKGQNVPA 348
           + S++  RG++YYTG  +E        +          +  GGRYDG +        +PA
Sbjct: 313 RFSTSFGRGVDYYTGFEFELHRAGNGDD---------PLVAGGRYDGLMTQLGAAAPIPA 363

Query: 349 TGFSIGISRL 358
            GFSI I  +
Sbjct: 364 VGFSIWIEAM 373


>gi|309811510|ref|ZP_07705292.1| proline--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434561|gb|EFP58411.1| proline--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 587

 Score = 66.8 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 1/110 (0%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L               V +     D+    K +     L +AG+          + G + 
Sbjct: 476 LDDKGLIWPRHIAPFDVHVVATGKDAAVFEKAEQVVADLESAGLGVLFDDRPKVSPGVKF 535

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           K A+    P  ++ G    S G +++KD   G      +    +   + V
Sbjct: 536 KDAELIGVPTIVVLG-RGLSDGTIEVKDRRSGTSRDVGVDEVAAEVLSEV 584



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++   +   +R   E  G   +  P L   E  ++  +     D     +
Sbjct: 40  GVYTWLPLGLKVLRNVETIVREEMEAIGAQELSFPALLPREPYEATNR----WDEYGPNL 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G  + L  
Sbjct: 96  FRLQDRKGVDMLLGP 110


>gi|261366651|ref|ZP_05979534.1| ATP phosphoribosyltransferase [Subdoligranulum variabile DSM 15176]
 gi|282571473|gb|EFB77008.1| ATP phosphoribosyltransferase [Subdoligranulum variabile DSM 15176]
          Length = 526

 Score = 66.8 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 62/411 (15%), Positives = 134/411 (32%), Gaps = 56/411 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L     +    E          +R +YE  G+        E      ++      P
Sbjct: 1   MEIQL----QNFTPAEQATFR-----LRALYEQAGYRKYRCSRFEEYALYQEY--RRFLP 49

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  V +  D DG+  +++ D+T  +A+            C+ +               F+
Sbjct: 50  DAQVVTFTDLDGKLRAIKPDVTLSIAKTA----QPAPGECKRFYYNEEVCRPSRESHTFQ 105

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              Q  ++ +G+    A AE+  +   +L A+ +      + +++   + G+L+ + +  
Sbjct: 106 TIHQMGLECMGAVDAAAQAEVVRLALQSLAALEVP---TVLEVSHMGFVTGLLDALKVPE 162

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + +                     +  LL E          + A LT E  + +   L +
Sbjct: 163 ESRGR-------------------LLELLNEKNAHELDAAARAAGLTEEGAEALCGLLQL 203

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                +       +     +     L  +  L  + G +     +  ++   +EYY G V
Sbjct: 204 HGP--LGATLTAARNCCRSDAQRAALEELQALQNRLGEDGRGTMLDLSMADEMEYYNGLV 261

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +   +            V  +V  GGRYD L+ RF          +IG +  +  L+ L 
Sbjct: 262 FTGYVA----------GVPRAVLKGGRYDYLMQRFTPGAN-----AIGFAIYLDELERLT 306

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           + +   +     +   +      L       ++L  AG RA      ++  
Sbjct: 307 AQSGEDRPGSEKVWLNIALPKGRLGD--KAYKLLAEAGYRANEDYNDTRKL 355


>gi|255659698|ref|ZP_05405107.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848272|gb|EEX68279.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 639

 Score = 66.8 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN +++  R+++  YG+  I+TP++  +  L +     D   + ++  
Sbjct: 263 GFPFFHPNGMIVRNELINYWRDVHRRYGYQEIKTPII-LNRQLWETSGHWDHYKENMY-F 320

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 321 TKIDGEDYAIKPMNCPG 337



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 44/121 (36%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +              + +   G+R E+    S+  G +++ +     P ++
Sbjct: 536 WLAPVQARILPITDKQADYAYELRKKMFDLGLRIEVD-DRSEKIGKKIRESQMLKTPYSL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E + G + ++    G++ S                 T+ + + ++ +++ +    
Sbjct: 595 VVGDQEMADGTVAVR--KYGEQQS----------------ETMKVEDFIAYLQEQIATKA 636

Query: 494 E 494
           +
Sbjct: 637 K 637


>gi|254374768|ref|ZP_04990249.1| hypothetical protein FTDG_00943 [Francisella novicida GA99-3548]
 gi|151572487|gb|EDN38141.1| hypothetical protein FTDG_00943 [Francisella novicida GA99-3548]
          Length = 565

 Score = 66.8 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 55/538 (10%), Positives = 143/538 (26%), Gaps = 78/538 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R+     G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IK 161
             R        F                     M     + L+ +G            I 
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYATYCNILDKIGLAYRPVKADTGAIG 203

Query: 162 RNDYHIGINNRKILDGILEK-----------IGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
            ++ H         + I+             +  +    L++R+     I+K+    ++ 
Sbjct: 204 GDNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKPDLSKRVNSQNTIEKIHTPNIKT 263

Query: 211 VKLLLGEGRTDNSGDFTK-----------------GANLTSEQIDIMVSFLSIDLEKSMH 253
           ++ L  E   D                           L   +I+ +   ++     +  
Sbjct: 264 IEKLCKEMSFDIKKTIKTMVIKDAEGNFFALVIRGDHELNETKINKLEQIVAPYTLATKE 323

Query: 254 ELYELVKGTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E++ +          +        +   +    +       +    +    R +  Y   
Sbjct: 324 EIFSIFNANPGSLGIYNCPISIIADYSAIAIIDLVCGANQDDYHFTNVNWDRDVTNYQIA 383

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKG------QNVPATGFS 352
               ++   +  + +  +   +    G        Y   ++          + +    + 
Sbjct: 384 DIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCYG 443

Query: 353 IGISRLIVALKSL---ESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGI 405
            G+SR++ A       E+     + + P  +  +                  Q L   GI
Sbjct: 444 FGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDGI 503

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +    ++  G     AD       ++ G     +G+++ K+    ++    I   
Sbjct: 504 DVLLDDRGAR-PGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAEL 560


>gi|257387444|ref|YP_003177217.1| threonyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169751|gb|ACV47510.1| threonyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 640

 Score = 66.8 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 70/249 (28%), Gaps = 14/249 (5%)

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
           DI++  L         +     + +   ++ + +     E V         I        
Sbjct: 402 DIILDILDTFSLDYTVQFATRPEKSTGSDEIWEKAESQLEAV----LEQEGIDYVVEEGD 457

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG----FSI 353
           G  Y     + A       +     V                     + P       +  
Sbjct: 458 GAFYGPKIDF-AFEDALGRHWDGPTVQLDFNMPDRFDLTYTGEDNEDHRPVMIHRALYGS 516

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                +V ++              V I  +    D++   +     L     R E+    
Sbjct: 517 YERFFMVLIEHYNGKFPPWLAPEQVRILPVS--DDNIDYCEEIAAELDD--FRVEIE-DR 571

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           S   G +++ A     P  ++ G  E + G + ++D  + +E   E+ + E   E  V Q
Sbjct: 572 SWTVGKKIQVAHDDKVPYMMVIGDDEEAAGTISVRDRKEREEKDLELADFEQHLEREVEQ 631

Query: 474 ITIPISELV 482
               ++ LV
Sbjct: 632 KRTAVTYLV 640



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 8/182 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          + N + + + ++    G+D +ETP +  ++ L K     D     +F L
Sbjct: 262 GLPLYEPNGKTVLNELSEYVADLNREAGYDEVETPHVFRTE-LWKKSGHYDNYVDDMF-L 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ-----F 128
            D + +   L+       A    +   +                 K   G          
Sbjct: 320 LDVNDEEYGLKPMNCPGHATIFDQKSWSY-RDLPIRYFEDGKVYRKEQRGELSGLSRTWS 378

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              D  ++    +  +AE+  +M   L+ +     DY +    R       ++I    + 
Sbjct: 379 FTIDDGHLFVRPDQIEAEVLSIMDIILDILDTFSLDYTVQFATRPEKSTGSDEIWEKAES 438

Query: 189 KL 190
           +L
Sbjct: 439 QL 440


>gi|192289751|ref|YP_001990356.1| ATP phosphoribosyltransferase regulatory subunit [Rhodopseudomonas
           palustris TIE-1]
 gi|192283500|gb|ACE99880.1| tRNA synthetase class II (G H P and S) [Rhodopseudomonas palustris
           TIE-1]
          Length = 382

 Score = 66.8 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 65/370 (17%), Positives = 121/370 (32%), Gaps = 55/370 (14%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           +++   +   G+     P+L+ ++       ++ R  K ++   D  G+ + LR DLT P
Sbjct: 17  EALLQSFAEAGYAQATPPILQPAEPFLDLSGEDIR--KSLYLTTDASGEELCLRPDLTIP 74

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
           +AR    +      P     +GPVFR     P  F Q           +A  A+     +
Sbjct: 75  VAREYLASK-AAGQPVGFCYLGPVFRQRGGKPSEFLQAGIESFGRQDRAAADAEMLALAL 133

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL-- 208
            A T    G         +     L   L+ + +     + +          L++  L  
Sbjct: 134 GATTALKAGEVEVR-TGDVALFAALIDALDLMPVWRRRLMKDFHRKASLAHDLERLTLAP 192

Query: 209 ------QGVKLLLGEGRTDNSGDFTKGA------------------------------NL 232
                 +GV   L       +                                      L
Sbjct: 193 STSNEYEGVLAALAGSDRKAALALVTDLMSIAGATTLGGRSVAEIADRFLEQSTLKSGAL 252

Query: 233 TSEQIDIMVSFLSIDL---EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
             + +D +  FL+I     +             ++ +   ++       +   G + +++
Sbjct: 253 PRDALDKIKRFLAIAGAPNDALKALRALAADAKLSIDAAIDQFEARIGFLAGRGIDLSKV 312

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPA 348
           + S+   RG++YYTG  +E                   +  GGRYDGL+S+      +PA
Sbjct: 313 RFSTAFGRGVDYYTGFEFEVHRAGNGDE---------PLVAGGRYDGLMSQLGAASPIPA 363

Query: 349 TGFSIGISRL 358
            GFSI I  +
Sbjct: 364 VGFSIWIEAM 373


>gi|56475942|ref|YP_157531.1| prolyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81821206|sp|Q5P7T1|SYP_AZOSE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56311985|emb|CAI06630.1| prolyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 583

 Score = 66.8 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 48/153 (31%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++ D +R+     G   +  PL++ ++ L       ++    +   
Sbjct: 38  GIYSYLPIGLRVIRKVEDIVRDEMNRAGALELTMPLVQPAE-LWDETGRWEQMGAEMLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
           +D   +  +L+    ++   +AR   +++  +       +                  F 
Sbjct: 97  KDRHQRDFALQPTSEEVVTDIARQELKSYRQLPKNFYQIQTKFRDERRPRFGVMRGREFT 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D   ++A  +   M        + +G
Sbjct: 157 MKDAYSFDRDVAAAGRSYDAMYAAYCRIFDRLG 189


>gi|150019972|ref|YP_001305326.1| prolyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166980168|sp|A6LJ40|SYP_THEM4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149792493|gb|ABR29941.1| prolyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 564

 Score = 66.8 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 62/514 (12%), Positives = 132/514 (25%), Gaps = 84/514 (16%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R   +I + +R   +  G   I  P+++ ++   K     D     
Sbjct: 34  KIAAGVYTYLPLARRTLLKIENIVREEMDRIGAQEILMPIIQPAELWIKS-GRWDDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH------ 120
           +  L+D   +  +L     +L   L +    ++  +      Y+I   +R+E        
Sbjct: 93  MMKLKDRHNRDFTLGPTHEELVTELVKNELNSYKQLP--VTLYQIANKYRDEIRPRFGVL 150

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI-L 179
               F         +   S +    +     +  LE +G++              +    
Sbjct: 151 RAREFIMKDAYSFHDSWESLDEVYKKFKEAYSRILERIGLRYTVIEASSGAIGGKESHEF 210

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFG--------LQGVKLLLGEGRTDNSGDFTKGAN 231
                +G+  +          D+   +          +  + L+         +  +   
Sbjct: 211 VAFAEYGESNILYCDCGYAGSDEKVPYMGEYEVFDEDEKERELVHTPNVRTVEEVAQYLG 270

Query: 232 LTSEQIDIMVSFLSIDL------EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
           +  ++I   + F   D         +    +E +K  +  +     + +   ++   G  
Sbjct: 271 VEIKRIVKSLIFKGRDGYVMVLVPGNRELNFEKLKAYLGDQSLQ--MALPENILEDFGVP 328

Query: 286 SNRIKISSTIVRGLEYYTGCVY--EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
              +         +    G  Y    ++G    N     V          +  LV    G
Sbjct: 329 IGFLGPVGISNVKIVADKGIKYMKNFVVGGMKKNYHYINVNLERDFQVEEWADLVVVNPG 388

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ--------- 394
           +  P  G  +   R I             K    + +  M+ D                 
Sbjct: 389 EPCPVCGKPLKSERGIEL---GHIFKLGTKYSETMDVKYMNKDGKMKPFIMGCYGWGISR 445

Query: 395 ---MYTQMLR-TAGIR-----------------------AEMFL-------------GSS 414
                 + L    GI                        AE                   
Sbjct: 446 TLGAIVEQLHDDNGIIWPVSVAPYEVVITVVGKENEKSFAEKLYRYLLDKGVDVLIDDRD 505

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            + G + K AD    PL I  G      G +++K
Sbjct: 506 VSPGVKFKDADLIGFPLRITIGKS-YKDGKVELK 538


>gi|77408338|ref|ZP_00785079.1| threonyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77173019|gb|EAO76147.1| threonyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 647

 Score = 66.8 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 41/386 (10%), Positives = 114/386 (29%), Gaps = 20/386 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    I    +     P+   E +         + D+       +  +  +  M  
Sbjct: 277 RYIVDK--EIASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNC 334

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + +K
Sbjct: 335 PHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIK 394

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG-EKGFNE 271
               +       +  +  NLT  +    +S+   + +   ++  E+ +   A  ++  ++
Sbjct: 395 DEFLKALNL-IAEIYEDFNLTDYRF--RLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDD 451

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
             +                            T    +     P   + +     G     
Sbjct: 452 FGLDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGE---- 507

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
                     +   +   G S       + +++ + +         V +  + +++  + 
Sbjct: 508 --------EHRPIMIHRGGISTMERFTAILIETYKGAFPTWLAPQQVSVIPISNEA-HID 558

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 + L+  GIRAE+    ++    +++ A  +  P  +I G  E     + ++   
Sbjct: 559 YAWEVARALKDRGIRAEVD-DRNEKMQYKIRAAQTQKIPYQLIVGDKEMEEKAVNVRRYG 617

Query: 452 KGKELSREIKNNESWREARVAQITIP 477
                ++ I+       A +A+ + P
Sbjct: 618 SKATETKSIEEFVESILADIARKSRP 643


>gi|313891921|ref|ZP_07825522.1| threonine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|329121028|ref|ZP_08249659.1| threonine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|313119564|gb|EFR42755.1| threonine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|327471190|gb|EGF16644.1| threonine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 634

 Score = 66.8 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 79/260 (30%), Gaps = 5/260 (1%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
               D++  F    ++ SE I ++  F  +     +    E +        G +EL  I+
Sbjct: 377 NFTQDDAHIFMTPKDMESEVISVVNMFKELYDVFGLKYHIE-LSTRPENSMGSDELWEIA 435

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRY 334
               ++   S  +        G  Y     +          +    +  +         Y
Sbjct: 436 TNALRNAIESTNVSYRINEGDGAFYGPKLDFHIEDSLGRTWQCGTIQMDMQLPERFDVTY 495

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
            G         +        + R I  L    +         PV +  +    +  +  Q
Sbjct: 496 VGEDGEKHRAVMIHRAGYGSLERFIGILIEHYAGAFP-TWCAPVQVKIIPVSENYHNYAQ 554

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + +   GIR E+    +   G +++ A     P  ++ G  E + G + ++   KG 
Sbjct: 555 EVYKKMFEQGIRVEID-KGNDTLGYKIRKAQMEKIPYMVVVGEKESNSGNISVRSREKGD 613

Query: 455 ELSREIKNNESWREARVAQI 474
           E + +I         ++ + 
Sbjct: 614 EGTVDINKFIELILNKMKER 633



 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN ++D  R ++  YG++ I TP++  S +L       D   + ++  
Sbjct: 261 GFPFFHPKGMVIRNLLIDYERELFRKYGYEEIVTPII-LSKNLWLQSGHWDHYRENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 TKIDNEDYAVKPMNCPG 335


>gi|311103966|ref|YP_003976819.1| prolyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310758655|gb|ADP14104.1| prolyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 575

 Score = 66.8 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 51/522 (9%), Positives = 126/522 (24%), Gaps = 85/522 (16%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  ++   +R      G   +  P+++ ++ L +     ++ 
Sbjct: 31  MIRKLAGGIYTYMPLGLKVIRKVEAIVREEMNAAGAIELLMPVVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   L+    ++   +AR    ++  +       +             
Sbjct: 90  GAELLRIKDRHQRDFVLQPTSEEVITDIARNEIHSYRQLPVNFYHIQTKFRDERRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI- 178
                F        D   + A+ +   M          +G+          +        
Sbjct: 150 MRGREFTMKDAYSFDRDEAGAQASYDTMYNAYMRIFGRLGLGFRAVAADTGSIGGTRSHE 209

Query: 179 LEKIGLHGDDKLNERLIVLRA--IDKLDKFGLQGVKLLLGEGRTD-------NSGDFTKG 229
            + I   G+D L        A  I+  +   L   +    +   D          D  K 
Sbjct: 210 FQVIADTGEDLLVYNADTDYAANIELAEAVALYPTRAEPAQAMADVPTPGAAKCEDVAKL 269

Query: 230 ANLTSE-QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN---------ELVVISELV 279
             L  E  I  +V  L+ D EK       L++G     +                 +E+V
Sbjct: 270 LGLPLERTIKSIV--LATDGEKGADIWLLLLRGDHELNEIKAGKLPGLAGFRFATETEIV 327

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG-------- 331
              G     +    T+          V          N++   +   + G          
Sbjct: 328 EAFGCKPGYLGPVKTVRPMHVIADRTVANMADFVCGANKEDFHIQGVNWGRDLPEPELVA 387

Query: 332 -----------------------------------------GRYDGLVSRFKGQNVPATG 350
                                                      +     +     +   G
Sbjct: 388 DLRNVVAGDPSPDGKGTLSIQRGIEVGHVFYLGKKYSEALKATFLDETGKPAVLEMGCYG 447

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGI 405
             +         ++ ++               +               Q   + L   G+
Sbjct: 448 IGVTRIVGAAIEQNHDARGIIWPRAIAPFEVVICPVGWGKSETVRDTAQKLYESLLARGV 507

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
              +    ++  G      +    PL +  G    + G++++
Sbjct: 508 DVILDDRDAR-PGVMFAEWELIGAPLRVTVGERGLNDGVVEL 548


>gi|78777058|ref|YP_393373.1| prolyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|114152275|sp|Q30S93|SYP_SULDN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78497598|gb|ABB44138.1| Prolyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 435

 Score = 66.8 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 54/454 (11%), Positives = 112/454 (24%), Gaps = 71/454 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +       +  +I   ++   +  G + ++   +       +     +   K +  +
Sbjct: 38  GLYNFLPLGKIVLEKIRAVVKEELDLAGCNEVQLSFVTPIGLWERS-GRSEAMGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D       L     +    L +    ++  +      Y+I   FR+E        +  +
Sbjct: 97  NDRHQNEFVLSPTNEEAMVELVKNRVTSYKDLP--LNLYQINTKFRDEARPRYGLLRGRE 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                       +       M    + +          +     +             K 
Sbjct: 155 -----FLMKDGYSFHSSTQDMIREFDLMEETYKKIFTRLGLDFRVVAADSGAIGGDGSKE 209

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL--TSEQIDIMVSFLSIDL 248
                               V    GE           GAN+    E  D +        
Sbjct: 210 FH------------------VLADSGEDTLIVCQSCNYGANIETIDEFKDKIDEL----- 246

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                            EK + EL  +    + S   +   K    +    +  T     
Sbjct: 247 ----------------NEKSYEELKELKIDQKCSCGANLHFKKGIEVGHIFQLGTKYSAA 290

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
               F   N + KP    + G G          +  +     ++                
Sbjct: 291 LEANFSDENGRSKPFEMATFGIGVSRLVAAIIEQNHDESGCIWT---------------- 334

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                     ++ +   D   +S  +     LR A +         + FG ++K A+   
Sbjct: 335 -KESAPYIVNIMVSNVKDEAQMSLGEDLYAKLRAAKVDVIFDDTKER-FGFKMKDAELIG 392

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            P  +I G  E   G++QI D    + +S E  +
Sbjct: 393 FPYTLIIG-KELEGGLVQIFDRKTKESISVESSS 425


>gi|258405882|ref|YP_003198624.1| prolyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798109|gb|ACV69046.1| prolyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 579

 Score = 66.8 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R  ++I   +R      G   I  P+++  D L K     +  
Sbjct: 31  MIRKVTSGIYTFLPLGLRALDKIAHVVREEMNRAGCQEIFMPMVQPGD-LWKETGRWEYY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPL----ARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +  L+D   +   L     ++   L     R   +    +      +R     R   
Sbjct: 90  GKELLRLKDRHDRDYCLGPTHEEVVTSLVRGEVRSYRQLPLNLYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D   + A+ +   M        + +G
Sbjct: 150 MRCREFIMKDAYSFDRDEAGAQKSYQTMFDAYTRAFQRLG 189



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 42/97 (43%), Gaps = 5/97 (5%)

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            + +  +K + + + L+  G+   ++    +  G + K AD    PL ++ G    +RG+
Sbjct: 481 KNEEVRTKAEAFYETLQEQGVDV-LYDDRVERPGFKFKDADLMGLPLQVVFGGKGVARGI 539

Query: 445 LQIKDLAKGKELSREIKNNES----WREARVAQITIP 477
           +++KD   G++    +         WR+   A   + 
Sbjct: 540 VEVKDRRTGEKAELPLDGLAEAFASWRDGVRAGWKVA 576


>gi|189485415|ref|YP_001956356.1| prolyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226701354|sp|B1H063|SYP_UNCTG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170287374|dbj|BAG13895.1| prolyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 569

 Score = 66.8 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 82/257 (31%), Gaps = 9/257 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  GF +     +++  ++ + IR    + G   +  PL+ +  +L       +  
Sbjct: 31  MIRKLASGFYELLPLGLKVLRKVENIIRQEMNSAGGQEVIFPLV-FPKALWLETDRWNAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            K +F L+D       L     ++   L R   +++  +      Y+ G  FR+E     
Sbjct: 90  GKELFKLKDRKDAEFCLAPTAEEVVTDLIRKDIKSYKQLP--VMLYQFGTKFRDEIRPRF 147

Query: 124 ---RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              R R+F+  D  +  +     +     M              +        ++ G   
Sbjct: 148 GVMRSREFLMKDAYSFHADEADLEKYYKTMFDAYTNICIKCGFQFRAVEAASGVIGGSFS 207

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +   D   E +         +    + +K+   +     S +         E +  +
Sbjct: 208 HEFMVLTDTGEEEMTWCSCGYGANSAKTECLKIEQSKEEPLPSEEIFTTDVCAIEDVAKL 267

Query: 241 VSFLSIDLEKSMHELYE 257
           ++       K+M  + +
Sbjct: 268 LNLSPKKFIKTMIYIAD 284



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 3/95 (3%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYAD 425
             TNNI     V++     D  +    +   + L + G+   +     +       K AD
Sbjct: 461 IWTNNIAPFEVVIVPLNYADEKTKETTEKIYKELSSKGLDVLIDDRDERAGIK--FKDAD 518

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
               P  I       + G +++K    GK+ +  +
Sbjct: 519 LIGIPYRITISEKNLANGNVELKARRDGKDDAVRL 553


>gi|146342925|ref|YP_001207973.1| ATP phosphoribosyltransferase regulatory subunit [Bradyrhizobium
           sp. ORS278]
 gi|146195731|emb|CAL79758.1| Putative histidyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 386

 Score = 66.4 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 122/371 (32%), Gaps = 53/371 (14%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           D++   +   G+   E  +L+ ++       ++ R  K ++   D  G+ + LR DLT P
Sbjct: 14  DTLLQSFAEAGYARAEPAILQPAEPFLDLSGEDIR--KSLYLTTDGGGEELCLRPDLTIP 71

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA----- 145
           +AR           P     +GPVFR     P  F Q            A  A+      
Sbjct: 72  VARDYL-GSARAGQPAGFSYLGPVFRYRGGRPSEFLQGGIESFGRQDRPAADAEMLALAI 130

Query: 146 ------------------EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
                              +   + D L+   + R       N ++ L   LE++     
Sbjct: 131 EATAAAGLAEVEIRTGDVALFTALIDALDLYPVWRRRLIKDFNRQRTLAQDLERLATAEV 190

Query: 188 DKLNERLIVLRA-------------IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN--L 232
              NE   VL A              D +   G   V         D   + +   +  L
Sbjct: 191 APRNEYEGVLAALAGSDRKAALALVTDLMSIAGATAVGGRTVAEIADRFLEQSTLKSGAL 250

Query: 233 TSEQIDIMVSFLSIDLE--KSMHELYELVKGT-IAGEKGFNELVVISELVRKSGYNSNRI 289
             + +D +  FL+I      ++ +L  L     +      + L   +  + + G +  R+
Sbjct: 251 PRDALDRIKRFLAISGSPADAVKQLRALAADAKLDISAAIDALDARTAFMAQRGIDVARV 310

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           + ++   RGL+YYTG  +E                   +  GGRYDGL+++    +    
Sbjct: 311 RFATAFGRGLDYYTGFEFELHHPGNGDE---------PLVAGGRYDGLLNQLGAASFIPA 361

Query: 350 GFSIGISRLIV 360
                    + 
Sbjct: 362 VGFSIWIERLA 372


>gi|293556705|ref|ZP_06675269.1| threonyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291601167|gb|EFF31455.1| threonyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 646

 Score = 66.4 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/443 (10%), Positives = 114/443 (25%), Gaps = 81/443 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D   + +F 
Sbjct: 260 SGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELY-KTSGHWDHYQEDMFP 318

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 319 PMDMGDGEMLVLRPMNCP-------HHMMVYKNTIHSYRELPIRIAEL------------ 359

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 360 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 415

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 416 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 465

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 466 FYGPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 525

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 526 RFVAYLTEVYKGAFPTWLA---------------------------------------PI 546

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +      +  + +           G+R E+    ++  G +++ +  +  P 
Sbjct: 547 QATIIPVSVDAHGDYAYEIKERLQM------KGLRVEVD-DRNEKMGYKIRASQTQKIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGK 454
            ++ G  E     + ++     +
Sbjct: 600 QLVVGDKELEDATVNVRRYGSKE 622


>gi|322707504|gb|EFY99082.1| threonyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 563

 Score = 66.4 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 48/453 (10%), Positives = 114/453 (25%), Gaps = 62/453 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI NR++D IR  Y  YGF  + TP + Y  +L       +     ++++
Sbjct: 132 GSPIFLPNGARIFNRLIDFIRKQYARYGFQEVITPTI-YKKALWAKSGHLENYADDMYTV 190

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                                 G    +            +  +
Sbjct: 191 T--------------------------GNTSTPDKDGGGCCGGDHGPAEPDLEADNEYGL 224

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + ++  D+     +R  + G L  +        ++ 
Sbjct: 225 KPMNCPGH---CLIFASRVHSYRELPVRYADFSP--LHRNEISGALSGLTRVRRFHQDDG 279

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGE-GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            I  R          + +K  L              G  L            + D     
Sbjct: 280 HIFCR-----PSQVEEEIKKTLDFVKVVYGVLRLGVGYRLALSTRPKDHFIGTEDEWNRA 334

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  ++   +   E   NE           G   + +   S             ++    
Sbjct: 335 EDRLKMALDSSGMEWSINEGDGAF-----YGPKIDIVIKDSDGKEHQTATIQLDFQLPKR 389

Query: 313 FPVMNEKQKP--VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           F +  +   P     G               +   +           + + ++S +    
Sbjct: 390 FALEYQAPAPEYEARGETTNDPVLLAEYGPVRPVMIHRAVLGSVERLMALLIESYDGKWP 449

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQML----RTA------------GIRAEMFLGSS 414
                   +I T++     L       ++L    + A            G+  ++   S+
Sbjct: 450 FWLNPRQAIILTVNTSRPVLDWADEVKEILLGLKKEAGQTSTEGPVNPTGLAVDVDY-SA 508

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           ++ G++++ A        ++ G  +   G + +
Sbjct: 509 RSLGSKIREARINGYSQILVVGEEDVKHGQVSL 541


>gi|150865907|ref|XP_001385312.2| hypothetical protein PICST_60715 [Scheffersomyces stipitis CBS 6054]
 gi|149387163|gb|ABN67283.2| eIF2-alpha Serine/threonine-protein kinase [Scheffersomyces stipitis
            CBS 6054]
          Length = 1671

 Score = 66.4 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 64/413 (15%), Positives = 142/413 (34%), Gaps = 49/413 (11%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLE--YSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
            +  I NRI+  +  I+  +G        +E   ++ L    P + R    V+ + D +G 
Sbjct: 1055 DYLIFNRIILEMYRIFRRHG-------AIEDFNANVLAPKAPFQSRD--LVYEVLDKNGS 1105

Query: 80   WISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
             ++L YDLT   AR +++   +I    R        V            +F     D   
Sbjct: 1106 VLTLPYDLTLTTARILSKADMSISKTYRHDFVYRPNVRGTGVPDKYSAVKFDITSHDASS 1165

Query: 138  SSAETADA-EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG--LHGDDKLNERL 194
                 A+  ++   +         K +   I +N+  IL+ +       +  DDK    +
Sbjct: 1166 RIVNDAECLKVVDEIIQAFPCFHAKSSSAIIVVNHNDILEAVTTFAFGSVRIDDKKRLEV 1225

Query: 195  IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
              + +   LDK   +  + L  + +  ++  +                  +++++K+  +
Sbjct: 1226 FGILSQLGLDKDADEIKRYLREDLKVPHTVTYDLVDGFD----------FTLEVDKARQK 1275

Query: 255  LYELVKGTI---AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
              +++K +      E+    L+ +  +++K G  S       +      Y  G +++ I 
Sbjct: 1276 FQKIMKDSPLLGKIERALQYLLDVVAVLKKFGVKSPVYFNPLSNYNSKYYSHGILFQGIF 1335

Query: 312  GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN------VPATGFSIGISRLIVALKSL 365
                         +  +  GGRYD L++ F  ++        A GF++  +   V +K L
Sbjct: 1336 KIEKNRR------YSRIVTGGRYDSLIASFVNKDIAKSNTPFAVGFTLTTTFTFVLMKKL 1389

Query: 366  -------ESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMF 410
                   +   +         +      +  + +      + L    I  + F
Sbjct: 1390 LHRKVKNQEFNHQKWRGVRCDVIITSPSAAYMDQSIYEIAKELWAHNINCDTF 1442


>gi|218885229|ref|YP_002434550.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226699140|sp|B8DNM5|SYP_DESVM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218756183|gb|ACL07082.1| prolyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 575

 Score = 66.4 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        ++   +    +R      G   +  P+++ +D L +     +  
Sbjct: 31  MIRKLTSGIYIYMPLGLKAIEKTAAIVREEMNRAGALELSMPMVQPAD-LWQESGRWEFY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +   QD +G+   L         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRFQDRNGRDYCLGPTHEEVITDLVRGEVRSYRQLPINLYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D   + A+ +   M     +  + +G
Sbjct: 150 MRGREFIMKDAYSFDRDEAGADKSYWAMYEAYQNVFKRLG 189



 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 1/101 (0%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I     VL      + ++L K + +   L+  G+   +     +  G + K AD  
Sbjct: 464 FPPPIAPFEAVLCCLDPKNGETLGKAEEFYAELKAQGVDVILDDRDER-PGVKFKDADLV 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
             PL ++ G    +RG+++ KD   G++    ++       
Sbjct: 523 GMPLQLVVGGKGLARGIVEAKDRRTGEKTELPVEGFAEAFR 563


>gi|257467949|ref|ZP_05632045.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062235|ref|ZP_07926720.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313687911|gb|EFS24746.1| prolyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 569

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 75/257 (29%), Gaps = 15/257 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         +   ++ + +R   +  G   I  P+L+ ++ L K     D  
Sbjct: 31  MIKKLTSGVYTYLPLGYKALKKVENIVREEMDRAGSQEILMPVLQPAE-LWKESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +  LQD + +   L     ++   L R    ++  +          +R     R   
Sbjct: 90  GPLMMKLQDRNKRDFVLGPTHEEVVTDLIRNDISSYKALPLSLYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI- 178
                F             S +     M    +      G+K                  
Sbjct: 150 MRGREFVMKDAYSFHATAESLDEEFLNMRDTYSRIFSRCGLKFRPVEADSGAIGGSGSQE 209

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
              +   G+D++        A +          ++         + +     N++  +ID
Sbjct: 210 FHVLADSGEDEIIYCDSCSYAANVETAVS----RVEASPVEELKNAELIDTPNVS--KID 263

Query: 239 IMVSFLSIDLEKSMHEL 255
            +V FL+I   K++  +
Sbjct: 264 DIVQFLNIPYSKTVKAM 280



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 23/131 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
                          V +   +  + + +   +   + L   GI + +        F   
Sbjct: 459 DEFGIIWPTALAPYIVDVIPANVKNEEQVKVAEEIYEALLNDGIDSMIDDRDERPGFK-- 516

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            K AD    P  ++ G      G++++K    G+                   + I   +
Sbjct: 517 FKDADLIGFPFKVVSGKR-AGEGIVELKIRRTGE------------------TLEISKDD 557

Query: 481 LVSTVKKILQE 491
           +VSTV++++++
Sbjct: 558 VVSTVRELMKK 568


>gi|256391426|ref|YP_003112990.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256357652|gb|ACU71149.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 666

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 88/299 (29%), Gaps = 46/299 (15%)

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HE 254
           L   D       + ++  L      +   F           D  +   + D EK +   E
Sbjct: 408 LTQDDAHIYCTREQMRDELV-----SLLRFVLDLLRDYGLNDFYLELSTKDPEKYVGTDE 462

Query: 255 LYELVKGTIAGEKGFNELVVISELV-RKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILG 312
            +EL   T+       +L ++ +            ++    I R  +  T    ++    
Sbjct: 463 EWELATDTLREVAEGEDLELVMDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFQLPQR 522

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +  +         +       G + RF                    L          
Sbjct: 523 FDLEYQAADGSRQRPIMIHRALFGSIERFF-----GVLTEHYAGAFPAWL---------- 567

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
               PV +  +      +   ++    LR  G+R E+     +    +++ A ++  P  
Sbjct: 568 ---APVQVVGIPITDAHVPYLELVASKLRAEGVRVEIDSSDDR-MQKKIRNAQKQKVPYM 623

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           ++ G  + ++  +  +    G++ +                  +P+ E V+ + K ++E
Sbjct: 624 LLAGDDDVAKAAVSFRY-RSGEQNNG-----------------VPVDEAVAEIVKAVRE 664


>gi|171910788|ref|ZP_02926258.1| threonyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 652

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/467 (11%), Positives = 109/467 (23%), Gaps = 48/467 (10%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   IR  + + I       G+  + TP +   +   K         +  FS     
Sbjct: 226 WLPKGAVIRQELQNFIGEELRKQGYQQVFTPHIGKLELY-KTSGHFPYYKESQFS----- 279

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                       P+        D +                  G  +  +          
Sbjct: 280 ------------PVV-----ENDELAKAADCGCSCAEVMARLEGVSKKLREEINSRTGQD 322

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +           +M   L       +   I   + K    +  ++   G     E+   L
Sbjct: 323 TITADRVMPEEDLMDGFLLKPMNCPHHIRIYAQSPKSYRDLPVRLAEFGTVYRWEQSGEL 382

Query: 198 --------RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                      D    F  +        G             ++  ++   V     D  
Sbjct: 383 GGLTRVRGFTQDDAHLFCTEDQVEQEIMGCLSLVKTVLTTLGMSDYRV--RVGLRDPDSN 440

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K         K   +  K  + L V      +    +         V             
Sbjct: 441 KYTGTAESWDKAEASCRKAASTLGVPF---TEEPGEAAFYGPKIDFVVKDVIGREWQLGT 497

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           +        +      G+              +   +    F        V ++      
Sbjct: 498 VQVDYNNPVRFDLTYIGADNAA---------HRPVMIHRAPFGSMERFTGVLIEHFAGHF 548

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   V + T+   SD+          L+  G+R  +   S K  G +++ A     
Sbjct: 549 PVWLAPEQVRVLTVSEKSDAF--ANEVLNELKAKGVRVVLDQSSDK-IGAKIRNAQIDKI 605

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           P  ++ G  E + G + ++   KG    + +    +  +  +A+  +
Sbjct: 606 PYMLVIGEKEANSGAVAVRHSKKGDLGVKALGEFVTGLQEEIAERKL 652


>gi|297544949|ref|YP_003677251.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842724|gb|ADH61240.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 634

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +  +G+  I+TP++   + L +     D   + ++  
Sbjct: 260 GFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEE-LWRRSGHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAPLA 92
            + DG+  +++        
Sbjct: 318 TEIDGETYAIKPMNCPGAM 336



 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  Q     L    IRAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELD-DRNEKVGYKIREAQLQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E  +G + ++   +G   +  +          +A
Sbjct: 592 IVGDKEVEQGTVSLRSRREGDLGAISLSEFIEKILKEIA 630


>gi|260495035|ref|ZP_05815164.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197478|gb|EEW94996.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 567

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + +R   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIRKIENIVREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GPEMLRLKDRHERGFVLSPTQEEMITAIVRSDISSYKSLP--INLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFTMKDAYSFH 164



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/334 (10%), Positives = 98/334 (29%), Gaps = 32/334 (9%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           I   +   ++ + + + +  +  +          D++    ++G    + E +  N  + 
Sbjct: 254 IHTPDCPTIESLAKYLDVPLERTVKALTYKDMGTDEIYMVLIRG-DFEVNEVKLKNILNA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMATDEEIEKLGLKKGYIGPYKLPNKIKIVAD-LSVPEISNHIVGSHQKDYHYKNIN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
           Y  +        +R ++    C+    L      E  +    G           +     
Sbjct: 372 YGRDYTADIVADIRKVKVGENCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDEKGQ 431

Query: 344 QNVPATGFSIG--ISRLIVALKSLE-----SSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
            +    G         +  A++            +I      +I     +   ++  +  
Sbjct: 432 SHYMLMGCYGIGVTRTMAAAIEQYNDENGIIWPVSIAPYIVDVIPVNIKNEAQVNLAEKI 491

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L+   I   +     +  G + K AD    P  ++ G      G +++K    G+  
Sbjct: 492 YNNLQEEKIDVMLD-DRDEKPGFKFKDADLIGFPFKVVVGKK-AEEGRVELKIRKTGE-- 547

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                              I  +E+++ +K++++
Sbjct: 548 ----------------TFEISQNEIINKIKELMK 565


>gi|149182849|ref|ZP_01861310.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148849464|gb|EDL63653.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 643

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 54/468 (11%), Positives = 121/468 (25%), Gaps = 99/468 (21%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   IR  I   I +  E  G+D + TP++   D   K     D             
Sbjct: 269 WLPKGATIRRIIERYIVDKEEKLGYDHVYTPVMGSVDLY-KTSGHWDHYQ---------- 317

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                              EN                              +  +   + 
Sbjct: 318 -------------------ENM------------------------FPVMDMDNEQLVLR 334

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                    +      +   + I+  +      +R  + G L  +       LN+  + +
Sbjct: 335 PMNCPHHMMIYKNSIHSYRELPIRIAELGTM--HRYEMSGALSGLQRVRGMTLNDAHLFV 392

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           R  D++ +   + V+L+L   +  +  D++   +    Q          D EK   +   
Sbjct: 393 R-PDQIKEEFKRVVRLVLEVYKDFDLNDYSFRLSYRDPQ----------DTEKYFDDDEM 441

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
             K     ++  +E+ +                         +  T    +     P   
Sbjct: 442 WNKAQQMLKEAMDEMEIDYFEAEGEAAFYGPKLDVQVKTALGKEETLSTVQLDFLLPERF 501

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           +       G               +   +     S     +   ++  + +         
Sbjct: 502 DLTYIGEDGK------------HHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTWLAPVQ 549

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  D       +   + L+  G+R E+     +  G +++ A     P  ++ G 
Sbjct: 550 VQVIPVSPDV-HFDYAKKVQEELQAQGLRVELD-SRDEKIGYKIREAQMSKIPYMLVVGD 607

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
            E     + ++    G++ S                 T+ +S+ V  V
Sbjct: 608 NEIQEEAVNVR--KYGEQKS----------------ETVSLSDFVQKV 637


>gi|87121381|ref|ZP_01077270.1| prolyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86163224|gb|EAQ64500.1| prolyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 575

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/259 (10%), Positives = 76/259 (29%), Gaps = 18/259 (6%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++ +G        +++  ++ + +R   +  G   I  P ++  + L +        
Sbjct: 31  MIRQVSKGLYTWLPTGLKVFRKVENIVREEMQRAGALEIIMPGVQPKE-LWEESGRWQEY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   +   L     ++   L R    ++  +       +             
Sbjct: 90  GPELLRIKDRHERDYCLGPTHEEVVTDLVRNEISSYKQLPLNLFQIQTKFRDEVRPRFGV 149

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKI 182
              +           S+  +      +M +    V  +   +Y     +   + G     
Sbjct: 150 MRSREFMMKDAYSFHSSPESLQTTYDVMHEAYCKVFDRVGLNYRPVRADTGSIGGAFSHE 209

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS------EQ 236
                +   + +    + D           + L E  +D         +L        + 
Sbjct: 210 FHVLAESGEDDIAFSDSSDFAAN-------IELAEAISDKQIADAPTLDLEEILTPNCKT 262

Query: 237 IDIMVSFLSIDLEKSMHEL 255
           I  +  FLS+D++K++  +
Sbjct: 263 IQQVADFLSLDVKKTVKTM 281



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTM--DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M  +       +       L+ AG+   +      + G +
Sbjct: 465 DDKGILWPDAIAPFQVSIVAMKYEKSEAVREQADRIYAELQAAGVDVMLD-DRKASPGVK 523

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              A+    P  ++       +G ++ K    G      + +      +R+ 
Sbjct: 524 FADAELLGIPHRVVISDKGLEKGTIEYKHRRTGDNDDLSLDSLVKTLISRLN 575


>gi|329925255|ref|ZP_08280198.1| proline--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328940088|gb|EGG36421.1| proline--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 575

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 6/137 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  +I   IR   ++ G   +  P ++ ++ L K     D     
Sbjct: 34  QTAAGIYSYLPLGWRVLRKIEAIIRQEMDSAGGQELLMPAVQPAE-LWKESGRYDVYGAE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L D   +   L     ++   + R    ++  +      Y+I   +R+E+       
Sbjct: 93  LIRLHDRHDREFVLGPTHEEVITSIVRQEISSYRKLP--VNLYQIQSKYRDERRPRFGLL 150

Query: 127 QFIQCDVDNVGSSAETA 143
           +  +  + +  S     
Sbjct: 151 RGREFLMKDAYSFDRDW 167



 Score = 39.8 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 50/177 (28%), Gaps = 12/177 (6%)

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
              A L F    E       G+          +     +     G        ++A  + 
Sbjct: 401 RCGAPLQFHRGIELGHVFKLGTKYSDAMNGKYLDADGREKPLIMGCYGIGVSRVMAAIAE 460

Query: 366 ES-------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +           ++      +I     D   +   +   + L  AG+   +     +  G
Sbjct: 461 QRISDGRLVWPMSVAPFKVHIIPVAVKDETQMQLAEHIYRELSGAGLEPLLDDRDERA-G 519

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDL-AKGKELSREIKNNESWREARVAQI 474
            + K AD    PL II G    + G ++   +   G ++S  ++           + 
Sbjct: 520 VKFKDADLAGAPLRIIVG-RGAASGEVEW--MGEDGIKISLPVEEAIQRSREEADRQ 573


>gi|163781697|ref|ZP_02176697.1| prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882917|gb|EDP76421.1| prolyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 570

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 10/153 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +      R+  +I   +R   +  G   +   +L  ++ L K     D     +F L
Sbjct: 38  GIYEILPAGWRVIRKIESIVRKEMDRSGAQELLLTVLNPAE-LWKETGRWDTYGNELFRL 96

Query: 74  QDDDGQWISLRY----DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRF 125
           +D  G+   L      ++T  L R V  ++  +          +R     R        F
Sbjct: 97  KDRSGREYCLGPTHEEEIT-DLVRKVVHSYRQLPVTLYQIQVKFRDEKRPRFGLIRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                   D    SA  +   M        + +
Sbjct: 156 IMKDAYSFDADEFSATMSYENMKFAYDRVFKKL 188



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 20/128 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +      +I     DS      +         GI   ++    ++ G +   AD 
Sbjct: 463 KWPTPVAPFELEIICLNMSDSQMTEVAEKLYLEAEEKGIEV-IYDDREESAGFKFADADL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I+ G      G ++++  A G++L                   +P+ E++  VK
Sbjct: 522 VGFPYRIVVGRK-VKEGKVELQKRATGEKLD------------------VPVEEVIDRVK 562

Query: 487 KILQENKE 494
           +++ E+K+
Sbjct: 563 EMIAEDKK 570


>gi|62261354|gb|AAX77983.1| unknown protein [synthetic construct]
          Length = 600

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 55/538 (10%), Positives = 143/538 (26%), Gaps = 78/538 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R+     G   +  P +  S+ L +  
Sbjct: 52  MLKAGLIK-KLASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQE-T 109

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L D   +         +    +AR       +    +      +R   
Sbjct: 110 HRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 169

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IK 161
             R        F                     M     + L+ +G            I 
Sbjct: 170 RPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYATYCNILDKIGLAYRPVKADTGAIG 229

Query: 162 RNDYHIGINNRKILDGILEK-----------IGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
            ++ H         + I+             +  +    L++R+     I+K+    ++ 
Sbjct: 230 GDNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKSDLSKRVNSQNTIEKIHTPNIKT 289

Query: 211 VKLLLGEGRTDNSGDFTK-----------------GANLTSEQIDIMVSFLSIDLEKSMH 253
           ++ L  E   D                           L   +I+ +   ++     +  
Sbjct: 290 IEKLCKEMSFDIKKTIKTMVIKDAGGNFFALVIRGDHELNETKINKLDQIIAPYTLATKE 349

Query: 254 ELYELVKGTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E++ +          +        +   +    +       +    +    R +  Y   
Sbjct: 350 EIFSIFNANPGSLGIYNCPISIIADYSAIAITDLVCGANEDDYHFTNVNWDRDVTNYQIA 409

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKG------QNVPATGFS 352
               ++   +  + +  +   +    G        Y   ++          + +    + 
Sbjct: 410 DIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCYG 469

Query: 353 IGISRLIVALKSL---ESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGI 405
            G+SR++ A       E+     + + P  +  +                  Q L   GI
Sbjct: 470 FGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKIKEVADKLYQDLLGDGI 529

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +    ++  G     AD       ++ G     +G+++ K+    ++    I   
Sbjct: 530 DVLLDDRGAR-PGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITIAEL 586


>gi|256751279|ref|ZP_05492159.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749834|gb|EEU62858.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 634

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +  +G+  I+TP++   + L +     D   + ++  
Sbjct: 260 GFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEE-LWRRSGHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAPLA 92
            + DG+  +++        
Sbjct: 318 TEIDGETYAIKPMNCPGAM 336



 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  Q     L    IRAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELD-DRNEKVGYKIREAQLQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E  +G + ++   +G   +  +          +A
Sbjct: 592 IVGDKEVEQGTVSLRSRKEGDLGAISLNEFIEKILKEIA 630


>gi|25028444|ref|NP_738498.1| prolyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259507503|ref|ZP_05750403.1| proline--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|81846817|sp|Q8FP97|SYP_COREF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|23493729|dbj|BAC18698.1| putative prolyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259164888|gb|EEW49442.1| proline--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 588

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 60/182 (32%), Gaps = 26/182 (14%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNN 371
           E       G          ++     + +P  G        ++A+           + + 
Sbjct: 426 EIGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGIGVSRLLAVLAEQRHDEAGLNWSP 485

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D+ ++   + Y   L  AGI          + G + K A+    P 
Sbjct: 486 AVAPYQVHVVAANKDAAAIEAAERYATELSQAGIDVLFDDRPKVSPGVKFKDAELLGMPF 545

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           A+I G    + G ++++ +  G++                    +P+ E V T+ +++ E
Sbjct: 546 ALILG-RGYADGTVELR-VRGGEKT------------------ELPVDEAVETIVRLVNE 585

Query: 492 NK 493
            +
Sbjct: 586 AR 587



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R    I   +R   +  G   +  P L   E  ++  ++    D     +
Sbjct: 40  GVYSWLPLGLRALRNIEQVVREEMDAIGGQELLFPGLLPREPYETTQRWTEYGD----SL 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 96  FRLKDRKGADYLLGP 110


>gi|297568238|ref|YP_003689582.1| prolyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924153|gb|ADH84963.1| prolyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 576

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 31/102 (30%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +    ++   +R      G   +  P+++ +D L +     ++    +   
Sbjct: 38  GVYSYLPLGLAAIRKVEQIVREEMNRAGAQELLLPMVQPAD-LWRESGRWEKYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D   +   L     ++   L R    ++  +       +  
Sbjct: 97  KDRHQRESCLGPTHEEVITDLVRMNIHSYRQLPVNLYQVQTK 138



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 1/106 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +L+     D    ++ +   Q L   GI   +     +  G++ K AD 
Sbjct: 461 IFPLPIAPFQVILLNLTPKDEVISAEAERLYQALTADGIEVLLDDRDER-PGSKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P+ ++ G   ++ G+L+I+  A G+         E+  +  VA
Sbjct: 520 IGIPIRLMVGKRFKNDGLLEIRTRADGQTSEATPAAAEAVIKEMVA 565


>gi|209886374|ref|YP_002290231.1| tRNA synthetase, class II [Oligotropha carboxidovorans OM5]
 gi|209874570|gb|ACI94366.1| tRNA synthetase, class II [Oligotropha carboxidovorans OM5]
          Length = 375

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 67/370 (18%), Positives = 130/370 (35%), Gaps = 50/370 (13%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           D++ + +   G+      +L+ ++       ++ R  K ++   D +G+ + LR DLT P
Sbjct: 9   DALLSAFAGAGYQQAAPAILQPAEPFLDLSGEDIR--KNLYLTSDANGEDLCLRPDLTIP 66

Query: 91  LAR-YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN-VGSSAETADAEMC 148
           +AR Y+A      V           FR  K              D+   + AE     + 
Sbjct: 67  VARDYLASQGAGEVRNFYYLGPVFRFRGGKPSEFLQAGVESFGRDDRAAADAEMMALALE 126

Query: 149 MMMADTLEAVGIKRND-----------YHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
              A  +  + I+  D               +  R+++     K  +  + +   +    
Sbjct: 127 ATSAFGVSNIEIRSGDVALFLALIDALKLAPVWRRRLIKCFSRKTSIAREVEGLTQNDGS 186

Query: 198 RAI--------------------DKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN--LTSE 235
                                  D +   G + V         D   + +      L+ E
Sbjct: 187 SDYEGVLAALAGSDRKAALALVTDLMSIAGTENVGGRTTAEIADRFLEQSTLKGGTLSRE 246

Query: 236 QIDIMVSFLSI--DLEKSMHELYELVKGTIAGE-KGFNELVVISELVRKSGYNSNRIKIS 292
            + ++  FL+I  + ++++ +L  L            +     +  +   G ++ +I  S
Sbjct: 247 TLTLIERFLAIAGEPDEALAQLRSLAADAKLDLNAALDAFESRTGFMAARGIDTGKIAFS 306

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGF 351
           ++  RG++YYTG  +E                   + GGGRYDGL++R      +PA GF
Sbjct: 307 TSFGRGVDYYTGFEFEIRRSNNGSE---------PLVGGGRYDGLLTRLGATLPIPAVGF 357

Query: 352 SIGISRLIVA 361
           S+ I  L  A
Sbjct: 358 SVWIDALAKA 367


>gi|167037181|ref|YP_001664759.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115599|ref|YP_004185758.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166856015|gb|ABY94423.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928690|gb|ADV79375.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 634

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +  +G+  I+TP++   + L +     D   + ++  
Sbjct: 260 GFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEE-LWRRSGHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAPLA 92
            + DG+  +++        
Sbjct: 318 TEIDGETYAIKPMNCPGAM 336



 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  Q     L    IRAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELD-DRNEKVGYKIREAQLQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E  +G + ++   +G   +  +          +A
Sbjct: 592 IVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKEIA 630


>gi|169335069|ref|ZP_02862262.1| hypothetical protein ANASTE_01475 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257807|gb|EDS71773.1| hypothetical protein ANASTE_01475 [Anaerofustis stercorihominis DSM
           17244]
          Length = 379

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 58/396 (14%), Positives = 146/396 (36%), Gaps = 48/396 (12%)

Query: 24  RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL 83
           +    + D++   Y+ YG++ I  P+    +   KF  +    N+ +  L D +G  + +
Sbjct: 10  KKYAFLKDTLSMFYKKYGYEQITIPMFMPYELYKKF--NFSHQNEEL-KLIDGNGNILVI 66

Query: 84  RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETA 143
           R D T  + + V+          + +    VFRN  +      +  Q  V+     ++  
Sbjct: 67  RADATFHVLKTVST--LKSKENEKYFYEAKVFRN-MNKDYTLDEINQTGVECFLKESDIV 123

Query: 144 DAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL 203
           D+++  +  ++L A+GIK  D  + +++   +  ++E+I                  D++
Sbjct: 124 DSDIIALAINSLFALGIK--DIRLDLSHADFVYALIEEI------------------DEI 163

Query: 204 DKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKGT 262
            K  ++ V   + +   D+   +    N+  +  D ++    +  + + +      +   
Sbjct: 164 KKDEVEIVHKFIEQKNRDDLISYLDKKNVDIKYKDKLIDICMLFGDFEEVINKARTIAIN 223

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                  +++  +  +++    +   + +       + YY+G +++              
Sbjct: 224 DKMNDALDKIEGVYNILKLYDLDK-YVYLDLGFTNAMNYYSGIMFKVYSID--------- 273

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
              G +  GGRYD L  +        +G       L +  + L  + ++   +  ++ + 
Sbjct: 274 -AGGEIINGGRYDRLARKI----AGRSGACGFSQNLDLTAQILSDNNDDFFSVDYLIYSI 328

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                + + K    ++ LR  G      L   KNF 
Sbjct: 329 ----KEDIKKGIDMSKQLRAKGYNV--SLMEGKNFK 358


>gi|237750837|ref|ZP_04581317.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373282|gb|EEO23673.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 612

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 44/105 (41%), Gaps = 5/105 (4%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +  +   +S  Q     LR  GI AE+ L  +++   +++ A+++  P+  + G
Sbjct: 508 PTQVIIIPINESHVSMAQNLQNELRLRGIYAELSLK-NESLNKKIRTAEKQKVPMIALIG 566

Query: 437 TGERSRGMLQIKD----LAKGKELSREIKNNESWREARVAQITIP 477
             E +   + I+D    +  G+ +  E+   E   +       + 
Sbjct: 567 DKELNNNSVSIRDRRMKMDSGENMQYEMSMQEFLEKTSNLHREVS 611



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 28/97 (28%), Gaps = 2/97 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI + +        ++P+  P +  SD   K         + ++  
Sbjct: 232 GLPIWLPKGARLRRRIEELLTRALILNEYEPVRCPEILKSDV-WKISGHYTHYKENMY-F 289

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              D     ++        +    +  +       + 
Sbjct: 290 TTIDEVEYGIKPMNCVGHIKVYQNSIRSYRELPLRFY 326


>gi|284048708|ref|YP_003399047.1| prolyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952929|gb|ADB47732.1| prolyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 571

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 6/133 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I + IR      G   I  P+++ S+   +           +F L
Sbjct: 38  GLYSYLPLAWRSLRKIEEIIREEMVPTGAQEIMMPIVQPSEIWQES-GRWPAYGAEMFKL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D  G+   L     +L   L R    ++  +      Y+I   FR+EK       +  +
Sbjct: 97  KDRHGRDFCLGPTHEELVTTLVRDDLRSYRQLP--VTLYQIQSKFRDEKRPRFGLMRSRE 154

Query: 131 CDVDNVGSSAETA 143
             + +  S  + A
Sbjct: 155 FIMKDAYSFDKDA 167



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 5/134 (3%)

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG---PVLITTMD-HDS 387
             Y  +  +     +   G  +G +      +  +     +        V++  M+  D 
Sbjct: 424 ATYLDVDGKEHPLVMGCYGIGVGRTLAAAIEQHHDKDGIIMPRNIAPYQVMVLAMNVKDE 483

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +S  K       L  AGI   +     +  G + K AD   CPL I+ G     R  ++ 
Sbjct: 484 ESWQKAVEIHDALNQAGIDTLLDDRDERA-GVKFKDADLIGCPLRIVIGPKTMKRNAMET 542

Query: 448 KDLAKGKELSREIK 461
           K    G+      +
Sbjct: 543 KLRCNGEMADVSFE 556


>gi|271967410|ref|YP_003341606.1| threonyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270510585|gb|ACZ88863.1| threonyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 659

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 42/120 (35%), Gaps = 19/120 (15%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +  +       S  Q   +  R  GIR E+     +    +++ A +   P 
Sbjct: 555 PPWLAPVQVVGIPIAEAHASYLQDVAKRARERGIRIEVDASDDR-MQKKIRNAQKSKVPF 613

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            ++ G  + + G +  +    G++ +                  +P+ E ++ +   ++ 
Sbjct: 614 MLLAGDEDIANGAVSFR-FRNGEQKNG-----------------VPVDEAINEIVDAIER 655


>gi|118497952|ref|YP_899002.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194323174|ref|ZP_03056958.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
 gi|152112922|sp|A0Q7N3|SYP_FRATN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118423858|gb|ABK90248.1| prolyl-tRNA synthetase [Francisella novicida U112]
 gi|194322538|gb|EDX20018.1| prolyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
          Length = 565

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 55/538 (10%), Positives = 143/538 (26%), Gaps = 78/538 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R+     G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IK 161
             R        F                     M     + L+ +G            I 
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYATYCNILDKIGLAYRPVKADTGAIG 203

Query: 162 RNDYHIGINNRKILDGILEK-----------IGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
            ++ H         + I+             +  +    L++R+     I+K+    ++ 
Sbjct: 204 GDNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKPDLSKRVNSQNTIEKIHTPNIKT 263

Query: 211 VKLLLGEGRTDNSGDFTK-----------------GANLTSEQIDIMVSFLSIDLEKSMH 253
           ++ L  E   D                           L   +I+ +   ++     +  
Sbjct: 264 IEKLCKEMSFDIKKTIKTMVIKDAEGNFFALVIRGDHELNETKINKLEQIVAPYTLATKE 323

Query: 254 ELYELVKGTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E++ +          +        +   +    +       +    +    R +  Y   
Sbjct: 324 EIFSIFNANPGSLGIYNCPISIIADYSAIAIIDLVCGANQDDYHFTNVNWDRDVTNYQIA 383

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKG------QNVPATGFS 352
               ++   +  + +  +   +    G        Y   ++          + +    + 
Sbjct: 384 DIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCYG 443

Query: 353 IGISRLIVALKSL---ESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGI 405
            G+SR++ A       E+     + + P  +  +                  Q L   GI
Sbjct: 444 FGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDGI 503

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +    ++  G     AD       ++ G     +G+++ K+    ++    I   
Sbjct: 504 DVLLDDRGAR-PGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITITEL 560


>gi|224436862|ref|ZP_03657851.1| ATP phosphoribosyltransferase regulatory subunit [Helicobacter
           cinaedi CCUG 18818]
 gi|313143340|ref|ZP_07805533.1| ATP phosphoribosyltransferase [Helicobacter cinaedi CCUG 18818]
 gi|313128371|gb|EFR45988.1| ATP phosphoribosyltransferase [Helicobacter cinaedi CCUG 18818]
          Length = 285

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 39/118 (33%), Gaps = 6/118 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  ELP+G         +++  I       +    +  I TP   + +         D  
Sbjct: 3   LEHELPQGSKLYFDTAAKLKRDIESCAIRAFYENDYKEIVTPTFSFLE------HQGDIF 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           N+ +  L  +    I LRYD T    R V +         + + I PVF        +
Sbjct: 57  NRELVRLSSESNHQIGLRYDTTLDAMRIVTKRITRSSEHKKWFYIQPVFSYPTTEIHQ 114


>gi|41614972|ref|NP_963470.1| threonyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|73919808|sp|Q74MP3|SYT_NANEQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|40068696|gb|AAR39031.1| NEQ177 [Nanoarchaeum equitans Kin4-M]
          Length = 633

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 36/105 (34%), Gaps = 2/105 (1%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            +        + PV +  +      L   +   + L  +  R E+     +    ++K A
Sbjct: 508 RKEKPVLPFWISPVQVRVIPVSEKYLEYAEQIAKEL-ESKFRVELD-DRDETLNKKIKDA 565

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +    P  I+ G  E     + ++D  + K     +++  S  E 
Sbjct: 566 ESLWVPYIIVIGEKEIKNNKITVRDRYENKVYETSLEDLISKMEE 610


>gi|325068893|ref|ZP_08127566.1| threonine--tRNA ligase [Actinomyces oris K20]
          Length = 683

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 43/122 (35%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +        LR  G+R E+     + FG +++ A +   P  +
Sbjct: 572 WLSPVQVRLIPVAEAFDAYVDDVAAQLRAQGVRVEVDHSDDR-FGKKIRNASKDKIPFTL 630

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +   G +  +    G++ +                  +P+ E V+ +  ++    
Sbjct: 631 IAGGEDAEAGAVSFR-FRDGQQTNG-----------------VPVKEAVAHIVSVIDARI 672

Query: 494 EE 495
            +
Sbjct: 673 ND 674


>gi|222446040|ref|ZP_03608555.1| hypothetical protein METSMIALI_01689 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435605|gb|EEE42770.1| hypothetical protein METSMIALI_01689 [Methanobrevibacter smithii
           DSM 2375]
          Length = 564

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 2/93 (2%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V I  + +           T  LR +G + E     S   G +   AD    PLAI   
Sbjct: 471 QVGIYPLVNKEGPREIAIEITDKLRESGFKVE--YDVSGTIGKRYARADEIGIPLAITVD 528

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                   + +++     +    I   + + E 
Sbjct: 529 FDSLEDNKITVRNRDSEAQERIAIDEIKDYLEE 561



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFL 60
           GF D       ++N I+   R  Y +  GF  IE P +   + L    
Sbjct: 27 SGFTDYGPLGASLKNNIMQKWRKQYVSGEGFYEIEGPTVMPKEVLKASG 75


>gi|19704979|ref|NP_602474.1| prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|81848323|sp|Q8RIE2|SYP_FUSNN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19712883|gb|AAL93773.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 567

 Score = 66.4 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + +R   +  G   +  P+++ ++ L +     D  
Sbjct: 31  MIKKLASGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMPVVQPAE-LWQESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++   + R    ++ ++      Y I   FR+E+    
Sbjct: 90  GPEMLRLKDRHERDFVLSPTQEEMITAIIRSDISSYKSLP--INLYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFTMKDAYSFH 164



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/334 (9%), Positives = 98/334 (29%), Gaps = 32/334 (9%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +   ++ + + + +  +  +          D++    ++G    + E +  N  + 
Sbjct: 254 VHTPDCPTIESLAKYLDVPLERTVKALTYKDMGTDEIYMVLIRG-DFEVNEVKLKNILNA 312

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 313 VEVEMATDEEIEKIGLKKGYIGPYKLPAKIKIVAD-LSVPEVSNHIVGSHQKDYHYKNVN 371

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
           Y+ +      T +R +     C+    L      E  +    G           +     
Sbjct: 372 YDRDYTADIVTDIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDEKGK 431

Query: 344 QNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMY 396
                 G         +A                      V +   +  ++  +S  +  
Sbjct: 432 TQFMLMGCYGIGVTRTMAASIEQNNDENGIIWPVSIAPYIVDVIPANIKNEVQVSLAEKI 491

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L+   I   +     +  G + K AD    P  ++ G      G++++K    G+  
Sbjct: 492 YNELQEEKIDVMLD-DRDEKPGFKFKDADLIGFPFKVVVGKR-ADEGIVELKIRRTGE-- 547

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                            + +  +E+++ +K++++
Sbjct: 548 ----------------TLEVSQNEVIAKIKELMR 565


>gi|182414299|ref|YP_001819365.1| threonyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841513|gb|ACB75765.1| threonyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 637

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/447 (11%), Positives = 103/447 (23%), Gaps = 42/447 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  + + I       G+  + TP +   +                   
Sbjct: 201 GLVLWTPNGAVIRQELQNFISEELRKQGYQQVFTPHIGKLELYKTSG-----------HF 249

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                   S  ++ T  LA+ + EN          +                R   +   
Sbjct: 250 PYYKDSQFSPIFE-TDSLAKAIGEN----CSCAEAFARLEAVSANLAAQINARTGKESIA 304

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL--HGDDKLN 191
            +     +   +   +   +    + I  +  H   +    L            G+    
Sbjct: 305 PDRVRPDDQLLSGFMLKPMNCPHHIKIFASQPHSYRDLPVRLAEFGTVYRWEQSGELNGM 364

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
            R+      D       + V   +  G             +   ++   V     D  K 
Sbjct: 365 TRVRGFTQDDAHLFCTEEQVAAEVL-GCLSLVKIILSTLGMADYRV--RVGLRDPDSNKY 421

Query: 252 MHELYELVKGTIAGEKGFNELVVISELV---RKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
             +     K   A  +    L V                   I   I R  +  T    +
Sbjct: 422 TGDAANWDKAENACREAAKTLGVPFTEEPGEAAFYGPKIDFVIKDVIGREWQLGT---VQ 478

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                PV  +                D    R    +    G       +   ++     
Sbjct: 479 VDYNLPVRFDLSYIGA----------DNQPHRPVMIHRAPFGSMERFCGV--LIEHFAGD 526

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                    V +  +          +     L+    RA +   S K  G +++ A+   
Sbjct: 527 FPAWLAPEQVRLVPIS--DKVADYARALLGRLKAENFRATLDEHSDK-LGAKIRRAEIDK 583

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKE 455
            P  ++ G  E     + ++  A+G E
Sbjct: 584 VPYTLVIGQKEAEANSVSVRSRARGDE 610


>gi|317121442|ref|YP_004101445.1| histidine--tRNA ligase [Thermaerobacter marianensis DSM 12885]
 gi|315591422|gb|ADU50718.1| Histidine--tRNA ligase [Thermaerobacter marianensis DSM 12885]
          Length = 546

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 27  NRILDSIRNIYENYGFDPIETPLLEYS--DSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
                 + +++  +G+  I TPL E +  + LG F      P   +    D  G+ ++LR
Sbjct: 70  EEARRRLASLFARWGYRRIRTPLWEEAGAELLGVF------PETALCRFVDPAGRVLALR 123

Query: 85  YDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
            D T  +AR+ A  F     P R   + PV+R +    GRF    Q  V+ +G+ A   D
Sbjct: 124 PDHTLAVARWAAPRFHG-PDPWRLSYVDPVYRRD-PRDGRFTAVTQAGVELLGAPAPAGD 181

Query: 145 AEMCMMMADTLEAV 158
            E+  ++ D L+A+
Sbjct: 182 VEILGLVLDALDAL 195


>gi|86607055|ref|YP_475818.1| threonyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86555597|gb|ABD00555.1| threonyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 603

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 3/102 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              V I  +      L         LR  GIR
Sbjct: 482 HRAPFGSLERLIGILIEEYAGDFPFWLAPEQVRILPVS--DQYLGYATQVRDQLREQGIR 539

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             +   S +    +++ A++   P  +I G  E++ G + ++
Sbjct: 540 VHIDADSDR-LPKKIRNAEKAKVPFMLIVGEKEQATGTVSVR 580


>gi|186685902|ref|YP_001869098.1| threonyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186468354|gb|ACC84155.1| threonyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 611

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 19/118 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      L   +     +R  GIRAE+     +  G Q++ A++   P+  
Sbjct: 509 WLAPVQARLLPVGDTQLDFAKDVVAKMRALGIRAEVDTSGDR-LGKQIRNAEKEKIPVMA 567

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           + G  E     L I+  A G+                     IP+ E+V  +K  + +
Sbjct: 568 VVGAKEVETNTLSIRTRASGE------------------LGVIPVDEVVDKMKDAIAK 607



 Score = 37.9 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ + D ++      G+  + TP +   D   K      +  + +F L
Sbjct: 225 GLPLWTPKGTLLRSTLEDFLKQEQVKRGYLSVVTPHIARVDLF-KTSGHWQKYKEDMFPL 283

Query: 74  QDDDGQ 79
             DD +
Sbjct: 284 MADDEE 289


>gi|323704478|ref|ZP_08116056.1| threonyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535940|gb|EGB25713.1| threonyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 634

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 48/127 (37%), Gaps = 1/127 (0%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     +A+ +   +      + PV +  +      L+  Q   + L    IR E+
Sbjct: 509 RVVFGSIERFIAILTENFAGAFPTWLAPVQVKILPISDKHLAYAQNIHERLLENDIRVEL 568

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               ++  G +++ A  +  P  +I G  E   G + ++   +G   S+ ++   S    
Sbjct: 569 D-DRNEKIGYKIREAQMQKIPYMLILGDKEVEAGNVSVRSRKEGDLGSKSLQEFLSSILE 627

Query: 470 RVAQITI 476
            + Q ++
Sbjct: 628 EIKQKSL 634



 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + D  R  +   G+  I+TP++   +   +     D   + ++  
Sbjct: 260 GFPFFHPKGMILRNILEDFWRKEHAKRGYQEIKTPIILNEELWHRS-GHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 318 TKIDDEDYAIKPMNCPG 334


>gi|307719284|ref|YP_003874816.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306533009|gb|ADN02543.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 578

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          Q   + LR AG+RAE  L + +    +++ A +   P A+
Sbjct: 475 WLAPVQVVVIPVSDVFAGYAQEVVRALREAGVRAEADLSADR-MNAKIRKAQQEKIPYAV 533

Query: 434 IQGTGERSRGMLQIKDLAKGKEL 456
           I G  E+    + ++ +  G++ 
Sbjct: 534 IVGQREQEGRTVSVR-VRGGEQR 555


>gi|302121711|gb|ADK92877.1| threonyl-tRNA synthetase [Hypericum perforatum]
          Length = 721

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 45/102 (44%), Gaps = 2/102 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +    + L      T+ L+ +G+RAE+  G        ++ A+++  PL  
Sbjct: 620 WLTPIQVRVLPVTDNQLEFCNEVTRKLKDSGVRAEVCHGER--LPKLIRNAEKQKVPLMA 677

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     + ++  + G   + +I +  S  ++ V + T
Sbjct: 678 VVGPKEVETQTVTVRSRSSGDVGTIDIDDFISRIKSTVEERT 719



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ I D+ + ++   G++ + TP +  +D L K     D   + +F  
Sbjct: 345 GLVFWHPKGAIVRHIIEDAWKKMHIANGYELLYTPHVAKAD-LWKISGHLDFYRENMFEQ 403

Query: 74  QDDDGQWISLRYDLTA 89
              + +   LR     
Sbjct: 404 MKIEDEQYQLRPMNCP 419


>gi|284045075|ref|YP_003395415.1| threonyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283949296|gb|ADB52040.1| threonyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 643

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +          +     LR A +R E+    +++ G +++ A+ +  P  +
Sbjct: 542 WLAPVQAIVLPIADRHADYARDVVAQLRAARVRVELD-DRTESVGRKIRDAELQKIPYML 600

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  ER  G + ++   +G E S  +    +   +   Q +
Sbjct: 601 VIGDREREAGEVALRRHREGDEGSLPVAEFVARVVSETEQRS 642



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/152 (11%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    +   + N ++   R + E  G+  ++TPL+  S+ L +     D+  + +F  
Sbjct: 269 GSAFWLPRGTSLWNSLVAFTREMNEPRGYQEVKTPLIFDSE-LWRTSGHWDKYRENMFVT 327

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +D + ++++       A        +       Y    +    +              
Sbjct: 328 HAED-RDLAVKPMNCPGHAHLFRSQRHSYRELPVRYSEPGLLHRNEPSGTLHGLMRVRHF 386

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +     + ++   +   L+ +      +
Sbjct: 387 AQDDAHIFCTEEQVHGEVVACLDLIFDTLGRF 418


>gi|86608959|ref|YP_477721.1| threonyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557501|gb|ABD02458.1| threonyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 603

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 3/102 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              V I  +      L         LR  GIR
Sbjct: 482 HRAPFGSLERLIGILIEEYAGDFPFWLAPEQVRILPVS--DQYLGYATQVRDQLREQGIR 539

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             +   S +    +++ A++   P  +I G  E++ G + ++
Sbjct: 540 VHIDADSDR-LPKKIRNAEKARIPFMLIVGEQEQAAGTVSVR 580


>gi|292670652|ref|ZP_06604078.1| threonine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647679|gb|EFF65651.1| threonine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 639

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN +L+  R ++  YG+  I TP++  S  L +         + +++ 
Sbjct: 263 GFPFFHPNGMILRNALLEYWREVHRRYGYQEISTPVI-LSRKLWETSGHWFHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLA 92
           +  DG+  +++        
Sbjct: 322 EI-DGEDYAIKPMNCPGCM 339



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 45/122 (36%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +       +  +     +   GIR E+   + K  G +++ +  +  P  +
Sbjct: 536 WMAPVQVRILPITERHTAYAESLRGRMFDLGIRVEVDDRNEKT-GYKIRESQVKKTPYTL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E+  G + ++    G++ S  +                   + ++ V++ +    
Sbjct: 595 VVGDQEQETGAVALR--KYGEKDSVVMAA----------------DDFIALVQEKIAVRA 636

Query: 494 EE 495
           +E
Sbjct: 637 QE 638


>gi|296314467|ref|ZP_06864408.1| proline--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838764|gb|EFH22702.1| proline--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 570

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 51/166 (30%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +TA  +M          +G
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTAYQDMYDAYCRIFTRLG 189


>gi|188580267|ref|YP_001923712.1| prolyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|226701310|sp|B1ZA28|SYP_METPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|179343765|gb|ACB79177.1| prolyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 441

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 56/457 (12%), Positives = 118/457 (25%), Gaps = 53/457 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+ N++ D IR   +  G   I  P ++ +D   +        
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLNKVCDVIRAEQDRAGAVEILMPTIQAADLWRESG------ 84

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                            RY+          +    +               E        
Sbjct: 85  -----------------RYE-------AYGKEMLRLKDR---------HERELLYGPTAE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + +         S +     +  +     + V  +           K             
Sbjct: 112 EVVTEIFRASARSYKDLPKNLYQISWKFRDEVRPRFGTMRSREFLMKDGYSFDLDQAAAR 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  +  LR  + L    +  ++   G    D S +F   A     ++    ++L +
Sbjct: 172 HSYNKVFVSYLRTFETLGLRAI-PMRADTGPIGGDLSHEFIILAKTGESEVFCDRAYLDM 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            +     +  + V G       +      ++ +      +   + S    RG+E      
Sbjct: 231 PVPPPSVDFDD-VAGLQGVVDSWTSHYAATDEMHDEAVFAEVPEASRLSARGIEVGHIFY 289

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +      P+      P         G Y    SR       A           +      
Sbjct: 290 FGTKYSTPMKAVVTGPDGQERPVHMGSYGIGPSRLV-----AATIEASHDEAGII----- 339

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              + I      LI     D+   +        L TAG+   ++    +  G +   AD 
Sbjct: 340 -WPDAIAPFDVALINLKVGDAACDAACAEIQSALETAGLSV-LYDDRDERPGAKFATADL 397

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              P  +I G    + G +++K  A G+  + +  + 
Sbjct: 398 IGLPWQVIVGPKGLAEGKIELKRRASGERETLDPVDL 434


>gi|193215696|ref|YP_001996895.1| threonyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|238692696|sp|B3QUU7|SYT_CHLT3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|193089173|gb|ACF14448.1| threonyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 659

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 88/264 (33%), Gaps = 10/264 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMV--SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
           D+S  + +   L  E    +    F+   L  +  +    ++      K      V  + 
Sbjct: 399 DDSHIYCRQDQLVDEICKAIDLTQFVFKTLGFAEVQTRLSLRDPENTSKYSGNNEVWVQA 458

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
            +     +++++++  I  G   + G   + I+   +  + Q   V        R+D   
Sbjct: 459 EQDLKDAADKMQLNYFIGLGEASFYGPKIDFIVRDAIGRKWQLGTVQVDYVMPERFDLTY 518

Query: 339 SRFKGQNV-----PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
               GQ           F      + + +++   +         V +  +    D     
Sbjct: 519 VGSDGQKHRPVVIHRAPFGSLERFIGILIENFAGNFPVWLSP--VQVMVLPITDDFRDYA 576

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
               Q L  AGIRAE+     +  G +++ A+ +  P   + G  E +   + ++   +G
Sbjct: 577 HSVLQKLLDAGIRAEID-ERGEKVGKKIRDAEIKKIPYMFVVGEKEMAAASVAVRRHKEG 635

Query: 454 KELSREIKNNESWREARVAQITIP 477
            + +  ++      +  ++   I 
Sbjct: 636 DKGTMPLQEAIRLLQTDISTKKIS 659



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 20/54 (37%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           +  E+  G      K   +RN +   +++     G+ P+ TP +   +      
Sbjct: 266 ISPEVGSGLPMWLPKGAILRNELESFLKDEQRRRGYLPVVTPHIGNIELYKTSG 319


>gi|289578715|ref|YP_003477342.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528428|gb|ADD02780.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 635

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +  +G+  I+TP++   + L +     D   + ++  
Sbjct: 260 GFPFFHPKGMIIRNILEDFWRKEHMKHGYQEIKTPIILNEE-LWRRSGHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAPLA 92
            + DG+  +++        
Sbjct: 318 TEIDGETYAIKPMNCPGAM 336



 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCPLA 432
            + PV +  +       +  Q     L    IRAE+    ++  G +++ A  ++  P  
Sbjct: 533 WLAPVQVRVLPISDKHYAYAQNVYGRLLENDIRAELD-DRNEKIGYKIREAQLQKKIPYM 591

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +I G  E  +G + ++   +G   +  +          +A
Sbjct: 592 LIVGDKEVEQGTVSLRSRKEGDLGAISLSEFIEKILKEIA 631


>gi|330719038|ref|ZP_08313638.1| histidine--tRNA ligase (putative) [Leuconostoc fallax KCTC 3537]
          Length = 536

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 132/395 (33%), Gaps = 55/395 (13%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP    D   +E+ I+  I      I     F PI TP LE          +  RP+  +
Sbjct: 4   LPATSRDEFGEELLIKQSIEHHFNLILNQAHFLPIATPFLEK--------GETLRPDS-M 54

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           + L   DG+  +L+ D+T PL+R++A N          Y  G  F       G + Q  Q
Sbjct: 55  Y-LSGKDGELFTLKSDMTRPLSRFLATNHINYPT--HLYYFGETFTPPTQLSGHYNQQTQ 111

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              + +G ++  A+ E+     + +  + +   D  I +++ K+ D +L    L      
Sbjct: 112 AGFEIIGETSWAAEQEILQQTLNLMAELDVT--DLEIELSDAKLADAVLATYQLSPQQ-- 167

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                +    D L    +   +  L      +             + D ++         
Sbjct: 168 -----ITCLKDALFNKNMTQYRQKLKAYHLIDDTFLVNWPMAFGLRGDALLP-------- 214

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                  L+  +            +   V+    ++ ++ +         YYTG      
Sbjct: 215 -------LLPDSPEINAMKTHWQELINSVKAFN-SNIKVHVDLAARPLKSYYTGTTIRTF 266

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                            +  GGRYD L+   +G  +PA G  I     + AL +L++ TN
Sbjct: 267 SQHVS----------EYIFSGGRYDQLLQDHRGCLLPAVGIGI----NVDALATLKAHTN 312

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
             +     L   +      + K       L+ AGI
Sbjct: 313 KQQPEKDNLTFVLAKG--RVEKAVRPL--LKNAGI 343


>gi|118602542|ref|YP_903757.1| ATP phosphoribosyltransferase regulatory subunit [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
 gi|118567481|gb|ABL02286.1| ATP phosphoribosyltransferase regulatory subunit [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 318

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 6/140 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP G  +    +  +   +   + ++Y + GF  +  P++E+ +SL       D  ++ 
Sbjct: 5   QLPEGIDELTDDQALVFESLRRQLLDLYADKGFGLVIPPMVEHVNSLLLT---SDTIDEK 61

Query: 70  VFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            F L D   G+ + +  D+T  +AR  A+    +V   +   I  + + +       R  
Sbjct: 62  TFKLLDPISGKMLGVHADITPQIARIDAKRGSDLVE--KYCYINSILKTKADDFYASRSP 119

Query: 129 IQCDVDNVGSSAETADAEMC 148
           IQ   +  GS   +AD E+ 
Sbjct: 120 IQAGAELYGSDKISADVEVI 139


>gi|257459113|ref|ZP_05624232.1| tRNA synthetase, class II [Campylobacter gracilis RM3268]
 gi|257443498|gb|EEV18622.1| tRNA synthetase, class II [Campylobacter gracilis RM3268]
          Length = 287

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 8/115 (6%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E+P G      K  +++  + +    I    GF  I TP   Y   L           + 
Sbjct: 12  EIPNGSRLYFGKSAQLKRELENKASEILVKNGFSEILTPYFSYHQHLS-------VAPQK 64

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           +  L D     ++LR D T  + R +           R + + P F+       +
Sbjct: 65  LLKLSDPTNHELALRADSTVDVVR-IVRKRLKDDKLRRLFYVQPTFKYPSDEFYQ 118


>gi|154175309|ref|YP_001408901.1| ATP phosphoribosyltransferase regulatory subunit [Campylobacter
           curvus 525.92]
 gi|112802225|gb|EAT99569.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Campylobacter curvus 525.92]
          Length = 286

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 38/115 (33%), Gaps = 8/115 (6%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E+P G      K  +++  I      I EN GF  I TP   Y   L             
Sbjct: 14  EIPVGSRLYFGKSAKLKRCIEQKASEILENEGFSEIVTPFFSYHQHLS-------VNATQ 66

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           +    D     ISLR D T  + R V           R + I PVFR       +
Sbjct: 67  LLRFSDSANHQISLRADSTVDVVRIVL-RRLKGDINKRWFYIQPVFRYPSSEIYQ 120


>gi|302404307|ref|XP_002999991.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261361173|gb|EEY23601.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 790

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/471 (10%), Positives = 116/471 (24%), Gaps = 59/471 (12%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++  I+  Y    +  + TP +  SD L K           +F + D D
Sbjct: 356 WLPHGARIYNTLMAYIKEQYFKRDYHEVITPNMYNSD-LWKVSGHWAHYKDDMF-VMDVD 413

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+             +        + Y   P    +     R             
Sbjct: 414 KEQFALKPMNCPG-------HCLMFGHAPKAYHQLPWRVADFGVLHRNEASGALSGLTRV 466

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
              +  DA +        + +    +      +       +  ++    D  + ER    
Sbjct: 467 RRFQQDDAHIFCREDQIGQEITNLFDFLRSMYSLLGFTYKL--RLSTRPDKFMGERATWD 524

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           RA D             + +   D       G                      ++E   
Sbjct: 525 RAED-------------MLKVALDEFAATEGGV------------------AWELNEGDG 553

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
              G     K  + L    +           I      V            AI G  V  
Sbjct: 554 AFYGPKIDIKILDCLNREWQCATIQLDFQLPINFGLEYVTADSAAKTKEDAAIKGPEVKA 613

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           ++ + VV  +                + +  +          + ++              
Sbjct: 614 KEPEAVVESAAAAAAPAAADGKEPAKKQLRMSKPLTWKRPPRILIEHFGGKWPMWLSPRQ 673

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           + I  +          +   ++ + AG   ++ L S +    +++ A         I G 
Sbjct: 674 IQIIPVGRG--FFEYAEEVQKIFKDAGFWVDVDL-SGETLQKKVRRAQLAQYNFVFIVGD 730

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            E     + ++                    ++     + ++E ++ +K++
Sbjct: 731 EEMKGRQVNVRYRDD--------------TSSQDRGKPVDVNEAITKLKEL 767


>gi|253583421|ref|ZP_04860619.1| proline-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251833993|gb|EES62556.1| proline-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 569

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         +   ++ + +R      G   I  P+L+ ++ L K     D  
Sbjct: 31  MIKKLTSGVYTYLPLGYKALRKVENIVREEMNRAGSQEILMPVLQPAE-LWKESGRWDVM 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  LQD + +   L  
Sbjct: 90  GPLMMKLQDRNKRDFVLGP 108



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 23/131 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
                          V +   +  + + +   +   + L   GI A +        F   
Sbjct: 459 DEFGIIWPTALAPYIVDVIPANIKNEEQVKVAEEIYEALLNDGIEAMIDDRDERPGFK-- 516

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            K AD    P  ++ G      G++++K    G+                   I +   +
Sbjct: 517 FKDADLIGFPFKVVSGKK-AGEGIVELKIRRTGE------------------TIELSKDD 557

Query: 481 LVSTVKKILQE 491
           +VSTV++++++
Sbjct: 558 VVSTVRELMKK 568


>gi|255582427|ref|XP_002532001.1| threonyl-tRNA synthetase, putative [Ricinus communis]
 gi|223528332|gb|EEF30374.1| threonyl-tRNA synthetase, putative [Ricinus communis]
          Length = 658

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 2/102 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +      L   +  T  L+  GIR E+F G        ++ A+++  PL  
Sbjct: 557 WLSPIQVRVLPVTDTQLEYCREVTSKLKENGIRTELFHGER--LPKLIRNAEKQKIPLMA 614

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     + I+    G+  +  I +  S  ++ + + T
Sbjct: 615 VVGPKEVETQSVTIRSRFSGELGTMTIDDFISRIKSAIEKRT 656



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 60/203 (29%), Gaps = 13/203 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ I DS + I+  + +D + TP +  +D L K     D   + ++  
Sbjct: 298 GLVFWHPKGAIVRHIIEDSWKKIHIEHDYDLLYTPHVAKAD-LWKISGHLDFYRENMYDQ 356

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD- 132
              + +   LR             +         +YR  P+   E     R+        
Sbjct: 357 MKIEDENYQLRPMNCP-------YHILVYKRKLNSYRDFPIRVAELGTVYRYELSGSLHG 409

Query: 133 ----VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
                         +  ++   +   L         ++        L  IL  +      
Sbjct: 410 LFRVRGFTQCILVLSFIDLQSGLLFQLIPRYSPVPSFNSHSFFPVCLSAILVCLWCTARF 469

Query: 189 KLNERLIVLRAIDKLDKFGLQGV 211
            +  +L  L+ +  L    ++ V
Sbjct: 470 PICWKLFSLQDLLALMHGDVEIV 492


>gi|308068985|ref|YP_003870590.1| Prolyl-tRNA synthetase class II (Proline--tRNA ligase class II)
           [Paenibacillus polymyxa E681]
 gi|305858264|gb|ADM70052.1| Prolyl-tRNA synthetase class II (Proline--tRNA ligase class II)
           [Paenibacillus polymyxa E681]
          Length = 579

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G         R+  ++   +R+  +  G   +  P+L+ ++ L +     D     
Sbjct: 34  QLAAGMYTYMPLGRRVLRKVEQIVRDEMDRAGAGELLMPVLQPTE-LWQESGRYDVYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  LQD   +  +L     ++   L R    ++  +          +R     R      
Sbjct: 93  LMRLQDRHDREFALGPTHEEVITSLIRNEVNSYRKLPVTLYQIQTKFRDERRPRFGLLRS 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F        D      +     M           G
Sbjct: 153 REFLMKDAYSFDAHWEGLDHTYWTMFRAYHRIFTRCG 189



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 43/121 (35%), Gaps = 8/121 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IG+SR++ A+               +      +I     D   +   +     L+  
Sbjct: 454 CYGIGVSRILSAIVEQNHDQNGMIWPYALAPFQVHIIPISVKDRLQMQIAEKLYNQLQDR 513

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G+   +     +  G + K +D    P+ I+ G      G +++ +     + +  I++ 
Sbjct: 514 GVEVLLDDREER-PGVKFKDSDLVGIPVRIVVGKD-AEHGKVELVERKSCNKETIHIEDI 571

Query: 464 E 464
           E
Sbjct: 572 E 572


>gi|297562207|ref|YP_003681181.1| threonyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846655|gb|ADH68675.1| threonyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 657

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/411 (10%), Positives = 101/411 (24%), Gaps = 49/411 (11%)

Query: 90  PLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
              R V E                     +           +    +          D  
Sbjct: 289 GTVRRVMEDYSRRRHEEDGYEFVYTPHATKGTLFEKSGHLDWYADGMYPPMQLDGGQDYY 348

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  M       +   R   +  +  R    G + +    G      R       D     
Sbjct: 349 LKPMNCPMHHLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYC 408

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
             + +   L     D+   F           D  +   + D EK +       + T    
Sbjct: 409 TKEQMADEL-----DSLLTFVLDLLRDYGLDDFYLELSTKDPEKYVGTDEVWEEATEILR 463

Query: 267 KGFNE--LVVISELV-RKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKP 322
           +   +  L ++ +            ++    I R  +  T    +     F +       
Sbjct: 464 EAAQKQGLELVLDPAGAAFYGPKISVQAKDAIGRTWQMSTIQVDFNMPERFDLEYTAADG 523

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                V                 +    F        V L+    +      + PV    
Sbjct: 524 SRQRPVV----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQAVG 565

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +    + +   +     LR  GIR E+     +    +++ A ++  P  ++ G  + S+
Sbjct: 566 IPIADEHVPYLRELAARLRAEGIRVEVDASDDR-MQKKIRNAQKQKVPFMLLAGDEDVSK 624

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
             +  +    G + +                  +P+ E V+ +   ++E +
Sbjct: 625 NAVSFRY-RDGSQNNG-----------------VPLDEAVAEIVAAVRERR 657


>gi|315651290|ref|ZP_07904318.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315486442|gb|EFU76796.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 651

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 62/473 (13%), Positives = 129/473 (27%), Gaps = 84/473 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K  ++  ++   I ++ +N +G+   +TPL+  SD   K     D    G+F 
Sbjct: 260 GLPLMLPKGTKMIQKLQRWIEDLEDNEWGYVRTKTPLMAKSDLY-KISGHWDHYQDGMFI 318

Query: 73  LQD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           L D   DG+ ++LR  +T P   YV +N                        G       
Sbjct: 319 LGDPQHDGEILALRP-MTCPFQYYVYKNTQKSYRDLPYRMGETSTLFRNEDSGEMHGL-- 375

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                                         +   + I   +  I     E+   +  +  
Sbjct: 376 -----------------------------TRVRQFTISEGHNVIRPDQAEEELQNCLNLA 406

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
              L  L   D +     +  K    +   D +      A L +  ++  + F   D E 
Sbjct: 407 IYVLETLGLRDDVTFRLSKWDKNNKEKYLGDEAYWEGTQAALRNILVEKGLPFTEADGEA 466

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           + +     ++      K    + +  +      ++   I  +   VR             
Sbjct: 467 AFYGPKIDIQAKNVYGKEDTMITIQLDAAIAENFDLYYIDQNGAKVRPY-IVHRTSLGCY 525

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                   ++    F +     +   L    K  +   +            LK L+    
Sbjct: 526 ERTLAWLIEKYAGKFPTWLCPEQVRILPISDKYADYANS-----------VLKELKK--- 571

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                                            G+ A +    ++  G +++ A     P
Sbjct: 572 --------------------------------NGVDATVD-TRTEKIGFKIRDARLSRLP 598

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
             ++ G  E + G + ++    G E S+++ +        +    I   E+  
Sbjct: 599 YMLVVGEKEEAEGSVSVRSRFAGDEGSKKLSDFVDMICKEIRTKEIRKEEVTE 651


>gi|300113463|ref|YP_003760038.1| prolyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539400|gb|ADJ27717.1| prolyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 574

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 35/104 (33%), Gaps = 4/104 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            L  G        +R+  ++ + IR   +  G   +  P ++ ++ L +     ++    
Sbjct: 34  RLAAGLYTWLPLGLRVLRKVENIIREEMDKAGAQEVLMPAVQPAE-LWRETGRWEQYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR 110
           +    D   ++        ++   L R   +++  +       +
Sbjct: 93  LLRFTDRHQRFFCFGPTHEEVITDLIRREIQSYKQLPANFYQIQ 136


>gi|168334535|ref|ZP_02692696.1| threonyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 635

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/388 (8%), Positives = 90/388 (23%), Gaps = 17/388 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                     +   + +N+ +         +  +  +G+  +  +      M    + + 
Sbjct: 264 LEEENGYLLTKTPNMAKNDLYKISGHWSHYKDGMFVMGNEEKDDEIIALRPMTCPFQFMI 323

Query: 160 IKRNDYHIGINNRKILD-GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
            K+  +       +  +   L +    G+     R+      D         ++    + 
Sbjct: 324 YKQEQHSYRDLPIRYAETATLARNESSGEMHGLIRVRQFTLADGHIVCTPDQLETEF-KN 382

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D      K   +  +       +     EK +             +   + L +  + 
Sbjct: 383 VVDLIKYIMKTLGIDKDISYRFSKWSPEFKEKYIDNPEAWETTETIMKNILDHLKIDYKE 442

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
                                +  T    +                          D   
Sbjct: 443 AENEAAFYGPKLDVQFKNVHGKEDTIITVQIDF------------ALAERFNMTYVDADG 490

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            +     +  +        L + ++    +         V I  +               
Sbjct: 491 EKKLPYIIHRSSLGCYERTLAMLIEKYAGAFPTWLAPTAVKILPIS--DKYADYAAEVAA 548

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            LR   I  E+   + K  G +++ A     P  ++ G  E     + ++   KG+E   
Sbjct: 549 TLRKNKILVEIDQRTEK-IGYKIREARNERVPYIVVVGADEMENKTVSVRSRQKGEEGVF 607

Query: 459 EIKNNESWREARVAQITIPISELVSTVK 486
            +          +A        + +T K
Sbjct: 608 ALDVFAQRVADEIASKFNYHDNITNTFK 635



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   I ++ E  G+   +TP +  +D   K          G+F +
Sbjct: 242 GLPLIMPKGAKVIQTLQRWIEDLEEENGYLLTKTPNMAKNDLY-KISGHWSHYKDGMFVM 300

Query: 74  --QDDDGQWISLRYDLTAPL 91
             ++ D + I+LR  +T P 
Sbjct: 301 GNEEKDDEIIALRP-MTCPF 319


>gi|146169598|ref|XP_001017218.2| threonyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|146145134|gb|EAR96973.2| threonyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 882

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 56/438 (12%), Positives = 126/438 (28%), Gaps = 22/438 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A        I N++++ +R  Y+  G+  + TP L +   L K     D+  + +F L
Sbjct: 359 GCAFFYPNGAHIYNKLMEVLRKQYKIRGYSEVITPNL-FDAQLWKISGHWDKYKENMFLL 417

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           ++D+ +    +             +        R+YR  P+   +     R         
Sbjct: 418 KNDNEEH-GFKPMNCP-------AHCLMFDSIQRSYRDLPLRYADFGVLHRNEVHGALSG 469

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                  +  DA +   M   +E +    +      +          K  L    + +  
Sbjct: 470 LTRVRRFQQDDAHIFCTMDQIMEEIKNALDFIDYMYSLFGF------KYSLALSTRPDNY 523

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +  +   D+ +    +G++                G  +    I +  +F       ++ 
Sbjct: 524 IGEIEMWDQAENALKKGLEAFGKPWAIKAKDGAFYGPKID---IQLYDAFDRGHQCGTIQ 580

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
             + L        +       I +  +K       + +S    + LE        A    
Sbjct: 581 LDFNLPIRFNLQYRAPENKDDIEKQRKKQESTEESVPLSQEEKKKLEQQISEGESADSLS 640

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTN 370
              ++K       S     +Y       K             IG     +A+   +++  
Sbjct: 641 HKKSKKSTDSSAQSQASEKKYVVAPHHLKLGFQRPVILHRAVIGSFERFLAILCEQTAGK 700

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P  +      +      Q     L+  G +  + L  S     +++ A      
Sbjct: 701 WPFWLSPKQLIICPITAKVNDFAQDVADRLKVEGYKVAVDLSES-TIQKKVRNAQLEQYN 759

Query: 431 LAIIQGTGERSRGMLQIK 448
              + G  E+  G + ++
Sbjct: 760 YIAVVGEEEKRGGYVDLR 777


>gi|46446335|ref|YP_007700.1| putative threonine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46399976|emb|CAF23425.1| putative threonine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 553

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 3/127 (2%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           +      + + ++  E S         V I  +     SLS  +      R+ G+R  + 
Sbjct: 418 WESLDRLIALLIERFEGSFPLWLAPEQVRILAVGEG--SLSYARQIETRCRSQGLRVGVD 475

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREA 469
              S   G ++  A++   P  +I G  E  R  +  + + K GK  S  ++        
Sbjct: 476 FKKSTKLGEKIHLAEKEKVPYLLIIGEQEIKRNAITFRSVEKPGKSESIRLEEFLEQIRQ 535

Query: 470 RVAQITI 476
           +    T+
Sbjct: 536 KCVCPTV 542


>gi|83954743|ref|ZP_00963454.1| ATP phosphoribosyltransferase regulatory subunit [Sulfitobacter sp.
           NAS-14.1]
 gi|83841027|gb|EAP80198.1| ATP phosphoribosyltransferase regulatory subunit [Sulfitobacter sp.
           NAS-14.1]
          Length = 359

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 126/371 (33%), Gaps = 43/371 (11%)

Query: 23  IRIRNRILDS---IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
           +  R+ IL     +R+++E  G   +E P+L+ +++L     ++ R    V S      Q
Sbjct: 1   MATRSDILAKAASLRSLFEAQGAAVVEPPILQPAETLLDLYGEDIRARAYVTSDAMRGEQ 60

Query: 80  WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
              LR D T P+   V  +      P R    G VFR ++  P R  ++IQ   +     
Sbjct: 61  M--LRPDYTLPV---VQMHMAHGADPARYTYAGEVFRRQERDPNRANEYIQAGYEVFDRG 115

Query: 140 AETA-----------------------DAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
              A                       D  + M     L+    ++      I   +   
Sbjct: 116 DPAAADAEVFALIQGALEGLPVTAVTGDIGILMAAVAGLDTSASRKAALMRHIWRPRRFR 175

Query: 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSE 235
            +L++    G   +      L A D      L G++ L   E R            L+  
Sbjct: 176 ALLDRY--AGKTPMPATRAALLASDGAITAPLIGLRSLDEIETRIAALRADATEPALSRT 233

Query: 236 QIDIMVSFLSID--LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           Q+ ++++ L +   +  ++ +L++L     A     + +    + +   G ++  +   +
Sbjct: 234 QVSLLLALLDVRETMPNAISQLHDLAVDMPAISDAVDRVAAREKALAGRGVDTGNLMFEA 293

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           +  R          E   GF             ++  GGRYD L  R            +
Sbjct: 294 SFGR-------VSMEYYDGFVFGFRAATRPDLPTIATGGRYDALTRRLGQGGEIPAVGGV 346

Query: 354 GISRLIVALKS 364
               L++ L++
Sbjct: 347 MRPGLMLELEA 357


>gi|317125361|ref|YP_004099473.1| prolyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315589449|gb|ADU48746.1| prolyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 588

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 29/100 (29%), Gaps = 1/100 (1%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                       V I     D           + L   G+   +      + G + K ++
Sbjct: 481 GIIWPRELTPADVHIVAAGKDEPLFRAADDIARDLEAHGLTCIVDDRKGVSPGVKFKDSE 540

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
               P  I+ G    + G ++IKD   G+     + +   
Sbjct: 541 LIGVPTIIVVG-RGLADGKVEIKDRRSGERREVALDSVVE 579



 Score = 50.6 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+   +   +R   +  G   +  P L   +               +F L
Sbjct: 40  GVYTWLPLGLRVLRNVERIVREEMDAIGAQELLFPALLPREPFDAS-GRWAEYGDNIFRL 98

Query: 74  QDDDGQWISLRY 85
           QD  G    L  
Sbjct: 99  QDRKGADHLLGP 110


>gi|212716449|ref|ZP_03324577.1| hypothetical protein BIFCAT_01373 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660702|gb|EEB21277.1| hypothetical protein BIFCAT_01373 [Bifidobacterium catenulatum DSM
           16992]
          Length = 611

 Score = 66.0 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 34/110 (30%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +   I     V +     D+ +    +     L   GI          + G + K
Sbjct: 498 DEKGLAWPAIIAPAQVHVVATGKDAAAFEAAERLIAELEAKGIEVIFDDRKKVSPGVKFK 557

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    PL  + G    + G ++++D       +  + +       RVA
Sbjct: 558 DAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQMIAERVA 607



 Score = 37.5 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                + + N+I + IR    +     +    L   E  ++  ++    D     +F L+
Sbjct: 46  WLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDN----IFRLK 101

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 102 DRHEADYLLAP 112


>gi|225017598|ref|ZP_03706790.1| hypothetical protein CLOSTMETH_01526 [Clostridium methylpentosum
           DSM 5476]
 gi|224949635|gb|EEG30844.1| hypothetical protein CLOSTMETH_01526 [Clostridium methylpentosum
           DSM 5476]
          Length = 375

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/408 (13%), Positives = 145/408 (35%), Gaps = 55/408 (13%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG-VFSLQDDDGQWI 81
           +R   ++  ++R +YE +G+        E       ++ +++      + +  D +G+ +
Sbjct: 8   LRKEEQVTLNLRRLYEQFGYKKYRMGKFEEYAL---YIENKNFLQSEAIITFNDLEGKLL 64

Query: 82  SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
           +L+ D+T  +     ++ +                        +++  Q  ++ +G    
Sbjct: 65  ALKPDVTLSIV----KHTNATRKSAEKVYYTENIYRLSKRNHEYKEISQMGLEFIGDLDP 120

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
            A  E+  +    L ++      + + I++   + G+ + +G     +            
Sbjct: 121 YAMIEVIGLA---LSSLNTISPQFLLDISHMGFVTGLFDSLGAEYHVQ------------ 165

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM--VSFLSIDLEKSMHELYELV 259
                  + +   +              A ++    D +  ++ L  D E+++    E+V
Sbjct: 166 -------EQLLSCIRSKNLHELRSIAAQAGISDFYRDKLEKITLLYGDFEQTLDAAQEIV 218

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
                 +   +EL  + E ++ + + ++ I++  +I+  + YY G ++   +        
Sbjct: 219 -LNDQMQNAVSELRALFEALKNTEF-ADNIRLDFSIINDVNYYNGIIFRGYVEN------ 270

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
               V  +V  GGRYD L+ RF           +G     + L  L  +  N  +     
Sbjct: 271 ----VPRAVLAGGRYDNLMKRFNK--------DVGAIGFALYLDELGRTYKNTLQYDVDA 318

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAG--IRAEMFLGSSKNFGNQLKYAD 425
           +   D  +D  +        L   G  +RAE  + +       L++A+
Sbjct: 319 LILYDEGAD-YAALFAAVSKLTQDGMRVRAEKEIPADLRAKQTLRFAN 365


>gi|307707001|ref|ZP_07643798.1| threonyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617527|gb|EFN96697.1| threonyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 647

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/382 (12%), Positives = 99/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
           A+ +  +  + +      A +A
Sbjct: 619 AQKETQTVSVDDFVQAILADIA 640



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|85709956|ref|ZP_01041021.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85688666|gb|EAQ28670.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 671

 Score = 66.0 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/456 (10%), Positives = 124/456 (27%), Gaps = 64/456 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RI   +   +R   +  G+  I+TP L       +      +  + +F++
Sbjct: 271 GSVFWHPKGYRIWRELEAYMRRKMDGGGYREIKTPQLMDVRQWTQS-GHWGKYAENMFAV 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D                                   I P   +        +     D 
Sbjct: 330 PD-----------------------------------IVPDVDDSGEAEASPKVADDADW 354

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +      A   +      +   + I+  +      +R    G L  +      +  + 
Sbjct: 355 MAIKPMNCPAHVLVFKQGITSYRDLPIRLGEMGCC--HRNEPHGALHGLMRV--RQFTQD 410

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +      ++    L      D    +     L  E+            E+   
Sbjct: 411 DAHIFCTEDQVVEEVRKFCALADSVYRDFGFSYHVKLALRPEKR--------FGSEEDWD 462

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  + ++  +A     NE     EL  +  + + +++   T   G  +  G +    +  
Sbjct: 463 KAEQELRDAVAEAGMDNEEYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLP 522

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             ++                      + +   +    F      + + ++       +  
Sbjct: 523 DRLDATYVGED-------------GEKHRPVMLHRAIFGSYERFIGILIEHFAGRLPSWL 569

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                ++ T+  D+D        T  L+ AGIR E  L  ++    +++       P  +
Sbjct: 570 APVQAVVATIVSDAD--DYANEATAKLQAAGIRVESDL-RNEKINYKVREHSLAKVPHLL 626

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           + G  E   G + ++ L + ++    +    +    
Sbjct: 627 VVGKREAEEGTVAVRTLGEKEQRVMSLDEAIAMLRD 662


>gi|15668403|ref|NP_247199.1| glycyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2500998|sp|Q57681|SYG_METJA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|1499005|gb|AAB98213.1| glycyl-tRNA synthetase (glyS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 577

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 20/113 (17%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  + +  D     +   QMLR  GI AE     S   G +   AD    P  I     
Sbjct: 485 YVLPLVNKDDMPKIAKEIEQMLRENGIIAE--YDDSGAIGRRYMRADEIGVPFCITVDGQ 542

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                 + +++    +++                   + I ELV  +K+ L+E
Sbjct: 543 TLEDRTVTVRERNTREQV------------------RVKIDELVDYLKERLKE 577



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++N I+   R  Y    GF  IE+P +   + L    
Sbjct: 31 GFVDYGPLGCLLKNNIISKFREQYIIKEGFYEIESPTVTPYEVLKASG 78


>gi|331266854|ref|YP_004326484.1| threonyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683526|emb|CBZ01144.1| threonyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 647

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/395 (12%), Positives = 100/395 (25%), Gaps = 40/395 (10%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NL +E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNL-NEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR-- 616

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                           R  +    T+P+ E V+ +
Sbjct: 617 ----------------RYGQKETQTVPVDEFVAAI 635



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|301095894|ref|XP_002897046.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262108475|gb|EEY66527.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 725

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/440 (11%), Positives = 109/440 (24%), Gaps = 74/440 (16%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G +       R+ N + D IR  Y   G+D + TPL+   + L +        +  +F  
Sbjct: 328 GSSFFLPHGTRVFNTLADFIRREYRRRGYDEVITPLIFKKE-LWETSGHLQNYHDDMF-- 384

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                V++   T                E    G          
Sbjct: 385 --------------------MVSQGIATDDACEEHGHTHSHGEEEYDQFGLKPMNCPGHC 424

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                + + +  E+ + +AD                 +R    G L  +        ++ 
Sbjct: 425 LLFREAKKYSYRELPVRLADF-------------SALHRNEASGALTGLTRVRRFHQDDA 471

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKSM 252
            I   A     +  L     L          DF     L++     M    L  D E  +
Sbjct: 472 HIFCTAAQVQSEMSL----ALDFIKHVYGIFDFKFNLRLSTRPEKYMGDLELWDDAEDQL 527

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAIL 311
               +         +G                    I ++  + R  +  T    ++  +
Sbjct: 528 RLALDDFGQPWTVNEGD----------GAFYGPKIDIVVTDALQRQHQCGTIQLDFQLPI 577

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F +  +         +                 +           + + ++        
Sbjct: 578 NFELEYDGADGEAHTPII----------------IHRAVLGSIERMMAILIEHTGGKWPL 621

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA---GIRAEMFLGSSKNFGNQLKYADRRN 428
                 V +  +                L+ A   G+  ++    SK    +++ A    
Sbjct: 622 WLSPRQVAVLPIA--EAHREYAYEVASTLQNATARGLYVDVQ-DGSKTLNKRIREAQVAG 678

Query: 429 CPLAIIQGTGERSRGMLQIK 448
               ++ G  E++ G + I+
Sbjct: 679 YNYILVVGDKEQASGEVNIR 698


>gi|114764030|ref|ZP_01443271.1| prolyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114543622|gb|EAU46636.1| prolyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 445

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/459 (9%), Positives = 116/459 (25%), Gaps = 61/459 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I + I       G  P+  P ++ +D L +     D  
Sbjct: 31  MIKQASAGIYSWLPLGYKVLRKIENIIHEEQARAGHIPMLMPTIQSAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  + D   + +       +L   + R    ++  +      Y+I   FR+E     
Sbjct: 90  GAEMLRITDRHDRDMLYTPTAEELITDIFRANVSSYRDLP--LTMYQIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFYM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A     +       
Sbjct: 180 SYLRTYERMGLQAI------------PMRADSGPIGGDDTHEFLVLAETGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D E +  +  +      + E+    L             ++     +   +  E   
Sbjct: 221 VFYDSEITELKFGDRAIDYDSVEQCQAVLEEF----TSRYARTDETHDEAVFNQVPEARR 276

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
                  +G       +     G+       + +        +  +     I        
Sbjct: 277 RTARGIEVGQIFYFGTKYSEAMGATVSDKDGNQVPVHMGSHGIGVSRLLGAIIEASH--D 334

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                           I  +   D+++ +        L   G+   ++  +++  G +  
Sbjct: 335 DRGIIWPEGVTPFHCGIVNLKTGDAEADAACDKIHAALIALGLD-PLYDDTNERAGAKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             D    P  I  G      G++++     G+      +
Sbjct: 394 TMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEELPPE 432


>gi|288553677|ref|YP_003425612.1| threonyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544837|gb|ADC48720.1| threonyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 643

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 54/399 (13%), Positives = 109/399 (27%), Gaps = 34/399 (8%)

Query: 92  ARYVAENF---DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            R V E +          +      +  +E +         + D+  V            
Sbjct: 276 VRRVIERYIVDKEERLGYQHVYTPILGSSELYKTSGHWDHYKDDMFPVMERDNEEFVLRP 335

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
           M        V  +    +  +  R    G++ +  + G     +R+  +   D       
Sbjct: 336 MNCPH-HMMVYKQDMRSYRQLPLRIAELGMMHRYEMSGAVSGLQRVRGMTLNDAHIFCRP 394

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
             +K            +  K   L  +    +      D EK   +     K     ++ 
Sbjct: 395 DQIKEEFLRVVYL-IQEVYKDFGL-DDYKFRLSYRDPEDKEKYFDDDAMWEKAQSMLKEA 452

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
            +EL V  +     G  +         VR        +    L F +        V    
Sbjct: 453 MDELDV--DYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYVGED- 509

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
                      + +   V     S     +   L+  + +         V +  +  D  
Sbjct: 510 ---------GQQHRPVVVHRGVVSTMERFVAFLLEEYKGAFPTWLAPVQVQVIPVSPDV- 559

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            L   +     L+ AG R E+    ++  G +++ A  +  P  ++ G  E   G + I+
Sbjct: 560 HLDYAKKVQDALQQAGARVEID-ERNEKIGYKIREAQMQKIPYMLVLGDKEMESGAVNIR 618

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
               G++ S   +                IS+L   +KK
Sbjct: 619 --KYGEQASESKELQAF------------ISDLAEELKK 643



 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 50/185 (27%), Gaps = 8/185 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  I   I +  E  G+  + TP+L  S+   K     D     +F +
Sbjct: 265 GLPLWLPKGATVRRVIERYIVDKEERLGYQHVYTPILGSSELY-KTSGHWDHYKDDMFPV 323

Query: 74  QDDDGQWISLRYDLTA-------PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + D +   LR               R   +    I      +R             R  
Sbjct: 324 MERDNEEFVLRPMNCPHHMMVYKQDMRSYRQLPLRIAELGMMHRYEMSGAVSGLQRVRGM 383

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                 +       +     +  ++ +  +  G+    + +   + +  +   +   +  
Sbjct: 384 TLNDAHIFCRPDQIKEEFLRVVYLIQEVYKDFGLDDYKFRLSYRDPEDKEKYFDDDAMWE 443

Query: 187 DDKLN 191
             +  
Sbjct: 444 KAQSM 448


>gi|313898260|ref|ZP_07831797.1| proline--tRNA ligase [Clostridium sp. HGF2]
 gi|312956642|gb|EFR38273.1| proline--tRNA ligase [Clostridium sp. HGF2]
          Length = 564

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 56/566 (9%), Positives = 133/566 (23%), Gaps = 107/566 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK+        G         R+  +I + +R   +  G   +  P +   +   K  
Sbjct: 31  MIKKSS------SGIYMIMPMGKRVLKKIEEIVREEMDAAGAQELLMPAMIPEEIYEKS- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +     +F+L+D   +   L     +L             +                
Sbjct: 84  GRREAFGSNMFALKDRYQKNYVLGPTHEEL---FTMAAMMKGSSYKDFPYNLYQIQTKFR 140

Query: 118 EKHGPGR---------FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           ++  P            +     D+D  G                    +  K      G
Sbjct: 141 DETRPRYGLIRVREFIMKDAYSFDIDEAGLQESYMKMFQAYKNIMDRCNLNYKIVKADTG 200

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
                + +       +  D  +            L+   +        E   D     T 
Sbjct: 201 AMGGSLSEEFQAITEIGED--VVVTCEGCDFSSNLEITEVIDTGRPSDEEALDMEIVETP 258

Query: 229 GANLTSEQIDIMVSFLS------------------IDLEKSMHELY--ELVKGTIAGEKG 268
            A    +        ++                  +  ++ ++E    +L++        
Sbjct: 259 DAKTIEDVAAFFQKSVNDFVKTLIYSVDGKTMAFLLKGDRELNETKVLKLLQANEMELAS 318

Query: 269 FNE----------------LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
           F+E                L     + R+     N I  ++     ++      +     
Sbjct: 319 FDEVERVTHARVGFAGPVGLECPIIMDREVANMKNFIVGANKTDHHIKNVNLKDFTVETV 378

Query: 313 FPVMNEKQKPVVFGS-----------------------VGGGGRYDGLVSRFKGQNVPAT 349
             +    +  +                              G  Y  + ++     +   
Sbjct: 379 ADIAQVHEGDICPKCGKPLKFCKGIEVGNTFKLGTKYAKALGLEYQDVNNKLHPVEMGCY 438

Query: 350 GFSIGISRLIVALKSLES----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           GF +      +  +  ++       ++      ++     D + +       + L+  GI
Sbjct: 439 GFGLERCMAAIVEQHNDASGIIWPTSVAPFEVAVVVVSSKDDEQMRIGNELYEALKKEGI 498

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              +     +  G + K  +    P  I  G      G ++ +                 
Sbjct: 499 DVLLDDRKER-PGVKFKDMELIGIPYRITVG-RGIKDGNVEFR----------------- 539

Query: 466 WREARVAQITIPISELVSTVKKILQE 491
                     + + E+V  VKK LQ+
Sbjct: 540 -ARTADESSDVSLHEIVDMVKKELQK 564


>gi|227327749|ref|ZP_03831773.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 572

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L       D+ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVREEMNNAGAIEVSMPVVQPAD-LWVESGRWDQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 3/111 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +   Q LR  GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAKGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
               +    P  I+ G        ++ K+   G++   +      +  A +
Sbjct: 520 FADMELIGVPHTIVIGDRNLDSEEIEYKNRRGGEKQMIKTSEIIDFLLANI 570


>gi|254455788|ref|ZP_05069217.1| histidine-tRNA ligase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082790|gb|EDZ60216.1| histidine-tRNA ligase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 350

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 121/344 (35%), Gaps = 42/344 (12%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETP-LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
           ++ +N     +R++ ++ GF  I+ P ++E +  + +         K +FS  D +G  +
Sbjct: 1   MKSKNLSEKILRSV-KSKGFKYIDLPSVIETNHIVQRSGE---NFRKFIFSFIDQNGSEL 56

Query: 82  SLRYDLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC--------- 131
            LR DLT A   RY+  N         + +     +N+K    R +   +          
Sbjct: 57  CLRPDLTIASCLRYLENNLKGKEKIFYSGQAYRKSQNKKDSIIRDQVGFEIIGSKDEKND 116

Query: 132 -------------DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
                        ++     +    + E+  ++   L+     +          K  + +
Sbjct: 117 DKEIINTSLKSLQNIKYTSGTLTIGNVEIFNLLISKLDIPKRWKLRLSRHFWREKYFNDL 176

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK----LLLGEGRTDNSGDFTKGANLTS 234
           L+++  + D       I  +   K+    L  V     +     R DN     +GA+   
Sbjct: 177 LKRLETNSDVDPTIVEIDKKRYFKMLNEDLSKVVAGRSINEILKRFDNKIRDPRGASKGK 236

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               I+  FL I     + +    +       K    +      +  +  +   +  S++
Sbjct: 237 NVSKIIKDFLKIKCP--ITKAASELNKFFKKNKINLVVDQKYFPISNNKISKLNVIFSTS 294

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
             R LEYYTG V++  +   + N         ++  GGRYD L+
Sbjct: 295 FGRQLEYYTGMVFKIDIKSKLKN--------RNIINGGRYDKLI 330


>gi|320582273|gb|EFW96490.1| Protein kinase, phosphorylates the alpha-subunit of translation
            initiation factor eIF2 (Sui2p) [Pichia angusta DL-1]
          Length = 1631

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 87/524 (16%), Positives = 196/524 (37%), Gaps = 75/524 (14%)

Query: 14   GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
            G AD       + ++I+  I  I+  +G        ++++  L    P  D     V+ +
Sbjct: 1024 GTADYL-----LHSKIVQEISKIFMRHGGIE----FVDHTALLFPKNPLYD-STYQVYEV 1073

Query: 74   QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR-IGPVFRNEKHGPGRFRQ----- 127
             D  G  + L YDLT P+AR +     +I    R       + ++E  GP +F++     
Sbjct: 1074 LDKAGSVLQLPYDLTLPMARLLGRRPLSIHKFFRIEDVYRSIDKDEGSGPSKFKEIDFDI 1133

Query: 128  -FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                 D   +    +    ++   +   L  +  K+++  I +N+  +LD ILE  G+  
Sbjct: 1134 VSRPNDSAELLPFYDAECIKVMSEIIAILPFL--KQSNVKIILNHCNLLDTILEYCGI-- 1189

Query: 187  DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LS 245
             ++    ++     +      ++ VK +L            +  N++S  ++ +V F   
Sbjct: 1190 -ERPQRVIVSRILAEVGFGKTIKEVKAILK-----------QDLNMSSTILNELVQFDFG 1237

Query: 246  IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            + + +   +L++L+  +    K  + L  IS+++    + +  + I    +R    Y   
Sbjct: 1238 LPIGQVRSKLHKLMMDSPHLGKVDSSLNYISKIMNYLEWFNVELNIE---IRPFSGYNSA 1294

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA-----TGFSIGISRLIV 360
             Y+  + F  + E +       +  GGRYD L+S       P       G  +    L  
Sbjct: 1295 FYKGGIMFTAVYEDKFK---SIICAGGRYDELISTLARNKSPRDLPRAVGLRLAWDFLFN 1351

Query: 361  ALKSLESSTNNI---------------KEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAG 404
            ++K  +   NN                 +     +      +  L +      Q+L +  
Sbjct: 1352 SMKRYQDMFNNRKDTKRKFQKENLKVVWQTKKCDVLIGFFSAGILKEIAPFLLQVLWSND 1411

Query: 405  IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG---ERSRGM--------LQIKDLAKG 453
            I A++   +S    + +  A   N    ++       E  +G         L++K+L   
Sbjct: 1412 ISADLV-NNSVTIDDMVNQAVESNVKWLLVVKAQTNMETLKGNSKSNKYKPLRLKNLEAK 1470

Query: 454  KELSREIKNNESWREA-RVAQITIPISELVSTVKKILQENKEEI 496
             ++  ++ +  S  +  +  +I +   +++    + L +N++ +
Sbjct: 1471 VDIEVDLHDLVSLLKGEQPKEIEVDTKDVLQD-AEALADNRQRV 1513


>gi|261822741|ref|YP_003260847.1| prolyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261606754|gb|ACX89240.1| prolyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 572

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L       D+ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVREEMNNAGAIEVSMPVVQPAD-LWVESGRWDQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 3/111 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +   Q LR  GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAKGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
               +    P  I+ G        ++ K+   G++   +      +  A +
Sbjct: 520 FADMELIGVPHTIVIGDRNLDSEEIEYKNRRIGEKQMIKTGEIIDFLLANI 570


>gi|317060327|ref|ZP_07924812.1| prolyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686003|gb|EFS22838.1| prolyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 569

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 12/164 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   ++ + IR   +  G   +  P+L+ ++ L +     +  
Sbjct: 31  MIKKLASGLYTYLPLGFRTLKKVENIIREEMDRAGSQELLMPVLQPAE-LWRESGRWNVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
            + +  L+D   +   L     ++   + R    ++ ++      Y I    R+E+    
Sbjct: 90  GEEMVRLKDRHQRDFVLGPTNEEVITDIVRNDISSYKSLP--INLYHIQTKVRDERRPRF 147

Query: 120 --HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  F             S +     M        E  G+K
Sbjct: 148 GLMRSREFIMKDAYSFHTSQESLDEEFENMKNTYTRIFERCGLK 191



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 39/128 (30%), Gaps = 23/128 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
                          V +   +  +++ +   +   + L    + A +        F   
Sbjct: 459 DENGIIWPTALAPYLVDVIPANIKNTEQMKLAEEIYENLNKEHLDAMIDDRDERPGFK-- 516

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            K AD    P  II G    +  ++++K    G+                   + +   E
Sbjct: 517 FKDADLIGFPFKIICGKK-AAENIVELKIRKTGE------------------TLEVSADE 557

Query: 481 LVSTVKKI 488
           ++ T+K++
Sbjct: 558 VIPTIKEL 565


>gi|326793278|ref|YP_004311099.1| prolyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326544042|gb|ADZ85901.1| prolyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 568

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 62/540 (11%), Positives = 137/540 (25%), Gaps = 87/540 (16%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ ++I + IR   +      +  P+    D L +     D     +   
Sbjct: 38  GIYSLLPPAKRVVSKIENIIRQEMDAIDGQEVLFPVALPGD-LWRESGRFDAVGSELVRF 96

Query: 74  QDDDGQWISLRYDLT-----APLARYVAENFDTIVFPCRTYR----IGPVFRNEKHGPGR 124
           +D  G+ + L   +T       LAR  A++++   F     +      P  R        
Sbjct: 97  KDRGGKDMVLG--MTHEEAAVHLARTEAKSYNNYPFMIYQIQTKFRDEPRARGGLIRVRE 154

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           F               E    +            G+   +     ++  ++ G +    +
Sbjct: 155 FTMKDAYSFHTSQEDLEAYYEQCLQAYHRIFARAGV--PETVCVQSDTGMMGGKVAHEFM 212

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLL--------LGEGRTDNSGDFTKGANLTSEQ 236
              D   + +I+  + D      +   KL         + E  T N+    + AN+    
Sbjct: 213 LLTDIGEDTIIICDSCDYQSNMEVATGKLPVATTEEGTIEEVHTPNAHTIEEVANMLGVT 272

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKG--FNELVVISELVRKSGYNSNRIKISST 294
            D  +     ++E     L   ++G +   +      +        K     N       
Sbjct: 273 ADKTLKACVFEMEGHKEPLIVFIRGDLQVNEAKLQKVVKATITPFEKYEDTPNLCFGFMG 332

Query: 295 IVRGLEYYTGCVYE--------AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
                      +++         ++G    +   K +          +  +    +GQ  
Sbjct: 333 PYNLDARDAKIIFDESLRNEKNLVVGGNKKDYHIKGISISRDIKDADFHDVAEVLEGQEC 392

Query: 347 PATGFSIGISRLIVA--------------------------------------------- 361
           P     +   R +                                               
Sbjct: 393 PCCHGKLQFKRGVEVGNIFQLGTRYSESMGMTYIDSDGKAKTPIMGCYGIGVGRLLACII 452

Query: 362 ---LKSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNF 417
                              V I  +      +          L ++     M     +N 
Sbjct: 453 EARHDEWGPIWPMSVAPWQVHICVLKSKKTDMDAIGNEIYNKL-SSKYEVIMD---DRNV 508

Query: 418 GN--QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           G   Q   AD    P+ ++ G      G +++    K  +   ++ + E    A +A+++
Sbjct: 509 GAGVQFADADLLGIPVRVVVGEKNLKEGKVELMTRDKSVKKLVDLGDVEKEVAALIAELS 568


>gi|326382934|ref|ZP_08204624.1| prolyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198524|gb|EGD55708.1| prolyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 576

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 50/158 (31%), Gaps = 8/158 (5%)

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           +L      E       G          ++        P  G        +VA+ + +   
Sbjct: 409 VLETAKGIEIGHIFQLGRKYTDAFAFDVLGENGKPVRPTMGSYGLGVSRMVAVLAEQLHD 468

Query: 370 NNIKEMGP------VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                         V +   + D  +++  Q     L  AG+   +F     + G + K 
Sbjct: 469 EKGLRWPREVAPFDVHLVIANKDEAAVAGAQRLAADLDAAGVSV-LFDDRKASPGVKFKD 527

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           A+    P+ ++ G    + G ++I+D   G+  +  + 
Sbjct: 528 AELLGMPVVVVVG-RGWADGTIEIRDRLSGETTAAPVD 564



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +++   + + +R   +  G   I  P L   D               +F +
Sbjct: 36  GIYEWLPLGLKVFRAVENLVREEMDAMGAQEILLPALLPRDPYET-TGRWTEYGPALFRV 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGADMMLGP 106


>gi|301155393|emb|CBW14859.1| prolyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 571

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 55/168 (32%), Gaps = 13/168 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G  +      R+  ++   IR   +  G   I+ P+++ ++ L +  
Sbjct: 26  MLRAGMIRP-LASGLYNWMPTGWRVLRKVEKIIREEMDKSGALEIKMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              ++    +   +D   +   L     ++   L R    ++  +      Y+I   FR+
Sbjct: 84  GRWEQYGPELLRFEDRGNRHFVLGPTHEEVITDLVRREVSSYRQLP--INLYQIQTKFRD 141

Query: 118 E------KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           E            F            +S +     M    ++    +G
Sbjct: 142 EVRPRFGVMRSREFIMKDAYSFHADHASLQQTYDVMYQTYSNIFNRLG 189



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/114 (11%), Positives = 33/114 (28%), Gaps = 19/114 (16%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V+   M          +   + L+  G+         +  G      +    P  ++ G 
Sbjct: 477 VVPMNMHKSESVQEYAEELYRTLQAQGVEVIFDDRKER-PGVMFADMELIGVPHMVVIGE 535

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
              + G ++ K+   G++                    I   +L+  +K  ++ 
Sbjct: 536 KNLANGEIEYKNRRTGEK------------------QMIAKDQLLDFLKGQIKA 571


>gi|222055493|ref|YP_002537855.1| prolyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254782902|sp|B9LZK1|SYP_GEOSF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|221564782|gb|ACM20754.1| prolyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 570

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 82/264 (31%), Gaps = 13/264 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R   ++ + +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLAAGVYNYLPLGLRSIRKVENIVREEMNRAGAIELLMPTVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
            K +   +D       L     ++   L R   +++  +          +R     R   
Sbjct: 90  GKELLRFRDRKDTEFCLGPTHEEVITDLVRREVKSYRQLPINLYQIQGKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D    +A+ +  +M        E  G+K   +     +   + G  
Sbjct: 150 MRGREFIMKDAYSFDVDEKAADISYDKMYQAYRRIFERCGLK---FRAVEADTGSIGGSW 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +   +   + ++   A D          +        D   D  K +    + I+ 
Sbjct: 207 SHEFMVLAESGEDAIVSCTACDYAANVEKAEARQSAVTEHAD-PRDMEKVSTPEKKSIEE 265

Query: 240 MVSFLSIDLEKSMHELYELVKGTI 263
           + +FL+I  E S+ +   L+    
Sbjct: 266 VAAFLAIH-ESSLVKTLVLLADNE 288



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 4/112 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
                           +I+ ++   D + +  +     L  AGI   +        F   
Sbjct: 457 DENGIIFPLPIAPFHCIISALNMKEDVVREASEAIYGQLAAAGIEVLLDDRDERPGFK-- 514

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            K AD    P+ I+ G+   + G +++K    G+     I +     +A V 
Sbjct: 515 FKDADLIGIPMRIVVGSKNLADGKVELKCRRSGEVELLSIADAVEKVKAAVN 566


>gi|45357977|ref|NP_987534.1| threonyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|73919806|sp|Q6M057|SYT_METMP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|44920734|emb|CAF29970.1| Threonyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 622

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/340 (11%), Positives = 99/340 (29%), Gaps = 25/340 (7%)

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
           ++ +  A       +K++ Y +  +    L  +      +        L  LRA    D 
Sbjct: 283 DLMLRFAACFGQFMMKKDMYLLPKHLPLRLYELSTYSFRYEQRGELVGLKRLRAFTMPDM 342

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
             +        E   D      K  +       I+  F     +++    + + K     
Sbjct: 343 HTVCMDMKQAMEAFEDQLWMGLKTGDDFKTPYAIIFRFTQDFFDENKEWFFAMAKEY-KQ 401

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           + G + ++ I    +        + +  +  R +E  T            +   ++  + 
Sbjct: 402 KYGKDAILEILSGRKHYWVGKVDMAVVDSFGRPIENPT--------VQIDVESAERFGIV 453

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
              G    +  ++      +V      +  +  +  L+           + P+    +  
Sbjct: 454 VHDGDKKVHPIILHCSPTGSVERVLCGLLENAYLNTLE--NKPPALPTWLTPIQARVIPV 511

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
                         LR++GIRA+      ++ G +++ A        ++ G  E   G L
Sbjct: 512 GDKHEEYALEVVNKLRSSGIRADFD-DREESMGKKIRNAGTDWVNYVVVIGDSEMESGKL 570

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
            +                E     +  + ++ + EL+  +
Sbjct: 571 TV-------------TVREESELKKPKKESLSVEELIEKI 597


>gi|325577191|ref|ZP_08147675.1| proline--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160773|gb|EGC72894.1| proline--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 571

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 13/168 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G  +      R+  ++   IR   +  G   I+ P+++ ++ L +  
Sbjct: 26  MLRAGMIRP-LASGLYNWMPTGWRVLRKVEKIIREEMDKSGALEIKMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              ++    +   +D   +   L     ++   L R    ++  +      Y+I   FR+
Sbjct: 84  GRWEQYGPELLRFEDRGNRHFVLGPTHEEVITDLVRREVSSYRQLP--INLYQIQTKFRD 141

Query: 118 E------KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           E            F            SS +     M    ++    +G
Sbjct: 142 EVRPRFGVMRSREFIMKDAYSFHADHSSLQQTYEVMYQTYSNIFNRLG 189



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 29/95 (30%), Gaps = 1/95 (1%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           VL   M          +     L+  G+         +  G      +    P  ++ G 
Sbjct: 477 VLPMNMHKSESVQEYAEELYCTLQAQGVEVIFDDRKER-PGVMFADMELIGVPHMVVIGE 535

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              + G ++ K+   G++     +    + + ++ 
Sbjct: 536 KNLANGEIEYKNRRTGEKQMIAKEQLLDFLKGQIK 570


>gi|294658713|ref|XP_002770831.1| DEHA2F15840p [Debaryomyces hansenii CBS767]
 gi|202953331|emb|CAR66354.1| DEHA2F15840p [Debaryomyces hansenii]
          Length = 1742

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 82/504 (16%), Positives = 172/504 (34%), Gaps = 57/504 (11%)

Query: 17   DCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLE--YSDSLGKFLPDEDRPNKGVFSLQ 74
            D    +  + +++++ +  I++N+G        +E   S+ L    P + R  + V+ + 
Sbjct: 1107 DHSISDYLLFSKMIEGLFKIFKNHG-------AIEDFNSNILLPKSPAQSR--ELVYEVL 1157

Query: 75   DDDGQWISLRYDLTAPLARYVAENFDTIVFPCR--TYRIGPVFRNEKHGPGRFRQFIQCD 132
            D  G  +SL +DL  P AR+++    TI    R        +             F    
Sbjct: 1158 DRSGSVLSLPFDLILPTARFLSRCNVTIPKMFRHEFVYRPNLRGAGVPDKYSAVNFDITT 1217

Query: 133  VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
             D        A+     ++ + L++    +      I      D I   I     +   E
Sbjct: 1218 HDIASRKVNDAEC--LKVVDEILQSFPCFKAKNSSSIIIINHFDIITSVINFSFGNIGIE 1275

Query: 193  RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   I  L + G+      +     +   DF     +T + ID+     + D EK+ 
Sbjct: 1276 DKRRHEVIGVLSQLGIDKSPEEIKRYLRE---DFNVPHTVTKDLIDVFN--FTTDPEKAK 1330

Query: 253  HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             +L + +  +    +    L+ I E++        +   S   +  L  Y    Y   + 
Sbjct: 1331 QKLEKAMLDSPLFLRVERALIYIKEVLSILRQFGVK---SPVYLNPLSNYNNKYYSHGIM 1387

Query: 313  FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN------VPATGFSIGISRLIVALKSLE 366
            F V+++  K   F  V  GGRYDGLVS    ++          GFS+  + + + +K+++
Sbjct: 1388 FQVIHQVDKNRRFSRVITGGRYDGLVSSLINKDVTKSSTPFVVGFSLTSTFMFLLMKNMD 1447

Query: 367  S----------STNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSK 415
                        +    +     +     +   +        + L    I +++F  +S 
Sbjct: 1448 RRSKASSKNSEFSKVKWKKSRCDVLVTSLNESYIRLSGYEIVKSLWAHDISSDIF--TST 1505

Query: 416  NFGNQLKYADRR---NCPLAIIQG-TGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            +       A +         ++        +   +    + GK     +KN  + + +  
Sbjct: 1506 SLE---DIAHKTDIDGANWVVLIKQPNSLQKSKQK---RSTGKFKPLRVKNVITNKVS-- 1557

Query: 472  AQITIPISELVSTVKKILQENKEE 495
                I   ELV  ++  ++E   +
Sbjct: 1558 ---DIEYEELVQFLQSEIEERNND 1578


>gi|94986834|ref|YP_594767.1| prolyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|114152206|sp|Q1MRD0|SYP_LAWIP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94731083|emb|CAJ54446.1| Prolyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 575

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        ++  N+ +  IR+     G + I  P+++ +D L K     D+ 
Sbjct: 31  MIRKLTSGIYTWLPLGLKTLNKAISIIRSEMNRIGAEEILMPMVQPAD-LWKESGRWDQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
            K +  ++D   +   L  
Sbjct: 90  GKELLRIKDRHDREYCLGP 108



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 5/106 (4%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +     +LI     D   + K     Q   + GI   +     +  G +   AD 
Sbjct: 462 IFPPPLAPFEIMLINLDPRDESVVMKASEIYQFFLSEGIEVFLDDREER-PGIKFNDADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK----NNESWRE 468
              P+ +I G    + G++++K+   G++ S  ++    +  SWR+
Sbjct: 521 LGFPIQVIIGAKSLANGIIEVKNRKTGEKSSFSLERFFTDFYSWRD 566


>gi|227114059|ref|ZP_03827715.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 572

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L       D+ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVREEMNNAGAIEVSMPVVQPAD-LWVESGRWDQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 3/111 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +   Q LR  GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAKGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
               +    P  I+ G        ++ K+   G++   +      +  A +
Sbjct: 520 FADMELIGVPHTIVIGDRNLDSEEIEYKNRRVGEKQMIKTSEIIDFLLANI 570


>gi|284992392|ref|YP_003410946.1| prolyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284065637|gb|ADB76575.1| prolyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 582

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 1/103 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +     D+      +   Q L  AG+          + G + K
Sbjct: 473 DELGLVWPREVAPADVHVVATGKDAAVFETAEALAQELLAAGLTVLYDDRPKVSPGVKFK 532

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+    P  +  G    + G+L+++D A G+     +    +
Sbjct: 533 DAELLGMPTIVTVG-RGLAEGVLELRDRATGEREEVPVGEVAA 574



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 8/77 (10%)

Query: 12  PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNK 68
           P GF        R+   +   +R   +  G   +  P L   E  ++  ++         
Sbjct: 39  PGGFT-WLPLGYRVFRNVERVVREEMDRMGAQEVHFPALLPREPYEATNRWTE----YGP 93

Query: 69  GVFSLQDDDGQWISLRY 85
            +F LQD  G    L  
Sbjct: 94  NLFRLQDRRGADFLLGP 110


>gi|288931794|ref|YP_003435854.1| glycyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894042|gb|ADC65579.1| glycyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 565

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 20/131 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +              V +  +    +   K     +MLR  GI  E     S + G + +
Sbjct: 444 ERRVLRLKRWMAPIDVAVLPLLSREEFQKKALEIVEMLRENGIYTE--YDDSGSIGRRYR 501

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
             D    P  +           + I+D                       Q+ + + ELV
Sbjct: 502 RFDEVGVPFCVTVDHQTFEDDTVTIRDRDT------------------TKQVRVKVEELV 543

Query: 483 STVKKILQENK 493
             +K++L   K
Sbjct: 544 GVLKELLNSEK 554


>gi|25010739|ref|NP_735134.1| threonyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77410759|ref|ZP_00787117.1| threonyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|73919827|sp|Q8E693|SYT_STRA3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|23095093|emb|CAD46328.1| theronyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77163138|gb|EAO74091.1| threonyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 647

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/386 (10%), Positives = 115/386 (29%), Gaps = 20/386 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    I    +     P+   E +         + D+       +  +  +  M  
Sbjct: 277 RYIVDK--EIASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNC 334

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + +K
Sbjct: 335 PHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIK 394

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG-EKGFNE 271
               +       +  +  NLT  +    +S+   + +   ++  E+ +   A  ++  ++
Sbjct: 395 DEFLKALNL-IAEIYEDFNLTDYRF--RLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDD 451

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
             +                            T    +     P   + +     G     
Sbjct: 452 FGLDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGE---- 507

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
                     +   +   G S       + +++ + +         V +  + +++  + 
Sbjct: 508 --------EHRPIMIHRGGISTMERFTAILIETYKGAFPTWLAPQQVSVIPISNEA-HID 558

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 ++L+  GIRAE+    ++    +++ A  +  P  +I G  E     + ++   
Sbjct: 559 YAWEVARVLKDRGIRAEVD-DRNEKMQYKIRAAQTQKIPYQLIVGDKEMEEKAVNVRRYG 617

Query: 452 KGKELSREIKNNESWREARVAQITIP 477
                ++ I+       A +A+ + P
Sbjct: 618 SKATETKSIEEFVESILADIARKSRP 643



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/387 (12%), Positives = 89/387 (22%), Gaps = 37/387 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 260 GLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMASVE-FYKTSGHWDHYREDMFPT 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V+++  H        I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIEVYKHHVHSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A   +  +   TL    I      I     K L+ I E   ++ D  L +
Sbjct: 359 GMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAE---IYEDFNLTD 415

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--- 249
               L   D  DK         + E       +      L   + +   +F    L+   
Sbjct: 416 YRFRLSYRDPEDKHKYYDN-DEMWENAQAMLKEAMDDFGLDYFEAEGEAAFYGPKLDIQV 474

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K+     E +                 + +   G     I I    +  +E +T  + E 
Sbjct: 475 KTALGNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPIMIHRGGISTMERFTAILIET 532

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
             G        + V    +      D      +          +                
Sbjct: 533 YKGAFPTWLAPQQVSVIPISNEAHIDYAWEVARVLKDRGIRAEVDDRN------EKMQYK 586

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMY 396
               +   +    +  D +   K    
Sbjct: 587 IRAAQTQKIPYQLIVGDKEMEEKAVNV 613


>gi|195997601|ref|XP_002108669.1| hypothetical protein TRIADDRAFT_51839 [Trichoplax adhaerens]
 gi|190589445|gb|EDV29467.1| hypothetical protein TRIADDRAFT_51839 [Trichoplax adhaerens]
          Length = 1385

 Score = 65.6 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 66/435 (15%), Positives = 141/435 (32%), Gaps = 51/435 (11%)

Query: 21   KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
            ++      I ++I  I+  +G   +  PLL       +     D       +L D+ G  
Sbjct: 801  QDNIKFTNICNAIEEIFREHGAINVNVPLLMPW---TRGYDHNDT----TVTLIDESGTL 853

Query: 81   ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            + L   L    AR+VA N    ++  + Y IG  +   ++G     +   C  D V ++ 
Sbjct: 854  VMLPRRLEENFARFVAHNR---IYELKRYYIGKAYSKSRYGGSIPDERNACTFDIVSTTK 910

Query: 141  ETADA--EMCMMMADTLEAVG-IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
            + A    E+  + ++ L+    ++  DY I +N+  +L  IL   G+  + +L+ ++I +
Sbjct: 911  KNALTIAEVICVASEVLKLFPLLQAQDYSIHLNHTTLLRNILSHCGI--ETRLHSQVIKI 968

Query: 198  RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHELY 256
             +  K      + +K  L             G  L+ E I   +  +++    +      
Sbjct: 969  FSSTKKQTIDSKFMKKQL------------HGLGLSDETIFKTIDIMNLSLPPEPFVVAL 1016

Query: 257  ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVM 316
            +        E+  N L  + E+   +      +       R                   
Sbjct: 1017 KRFYNERISEEDSNALNNLCEIYSLAQLL--NVDQILISFRFTHGANSRFSGPFFNITYS 1074

Query: 317  NEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG 376
            +  +   +F  +  GG Y+  + +F  +       SI    +  ++  + +  + +    
Sbjct: 1075 DSSRSKRLFDIIASGGSYEKFIDKFSRRED-----SINYYGVTFSIDKMLAWRHQMTGNS 1129

Query: 377  PVLITTMDHDSDSL-SKYQMYTQMLRTAGIRA-------EMFLGSSKNF--------GNQ 420
               I    +    L +        L  AG R        E       +            
Sbjct: 1130 LCDILIFPYREGVLDNDIIELAGALWDAGFRVKLQYDFYESDYAEKPDMASVTSDLDKTA 1189

Query: 421  LKYADRRNCPLAIIQ 435
            L Y  +      ++ 
Sbjct: 1190 LAYCLKMGISFLVLL 1204


>gi|22536875|ref|NP_687726.1| threonyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76787804|ref|YP_329459.1| threonyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76799413|ref|ZP_00781564.1| threonyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77405954|ref|ZP_00783034.1| threonyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77413516|ref|ZP_00789706.1| threonyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|73919828|sp|Q8E0L9|SYT_STRA5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123771973|sp|Q3K1Z4|SYT_STRA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|22533725|gb|AAM99598.1|AE014224_1 threonyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76562861|gb|ABA45445.1| threonyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76585236|gb|EAO61843.1| threonyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77160460|gb|EAO71581.1| threonyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77175465|gb|EAO78254.1| threonyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 647

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/386 (10%), Positives = 115/386 (29%), Gaps = 20/386 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    I    +     P+   E +         + D+       +  +  +  M  
Sbjct: 277 RYIVDK--EIASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNC 334

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + +K
Sbjct: 335 PHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIK 394

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG-EKGFNE 271
               +       +  +  NLT  +    +S+   + +   ++  E+ +   A  ++  ++
Sbjct: 395 DEFLKALNL-IAEIYEDFNLTDYRF--RLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDD 451

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
             +                            T    +     P   + +     G     
Sbjct: 452 FGLDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGE---- 507

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
                     +   +   G S       + +++ + +         V +  + +++  + 
Sbjct: 508 --------EHRPIMIHRGGISTMERFTAILIETYKGAFPTWLAPQQVSVIPISNEA-HID 558

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 ++L+  GIRAE+    ++    +++ A  +  P  +I G  E     + ++   
Sbjct: 559 YAWEVARVLKDRGIRAEVD-DRNEKMQYKIRAAQTQKIPYQLIVGDKEMEEKAVNVRRYG 617

Query: 452 KGKELSREIKNNESWREARVAQITIP 477
                ++ I+       A +A+ + P
Sbjct: 618 SKATETKSIEEFVESILADIARKSRP 643



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/387 (12%), Positives = 89/387 (22%), Gaps = 37/387 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 260 GLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMASVE-FYKTSGHWDHYREDMFPT 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V+++  H        I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIEVYKHHVHSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A   +  +   TL    I      I     K L+ I E   ++ D  L +
Sbjct: 359 GMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAE---IYEDFNLTD 415

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--- 249
               L   D  DK         + E       +      L   + +   +F    L+   
Sbjct: 416 YRFRLSYRDPEDKHKYYDN-DEMWENAQAMLKEAMDDFGLDYFEAEGEAAFYGPKLDIQV 474

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K+     E +                 + +   G     I I    +  +E +T  + E 
Sbjct: 475 KTALGNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPIMIHRGGISTMERFTAILIET 532

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
             G        + V    +      D      +          +                
Sbjct: 533 YKGAFPTWLAPQQVSVIPISNEAHIDYAWEVARVLKDRGIRAEVDDRN------EKMQYK 586

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMY 396
               +   +    +  D +   K    
Sbjct: 587 IRAAQTQKIPYQLIVGDKEMEEKAVNV 613


>gi|283850295|ref|ZP_06367584.1| prolyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574321|gb|EFC22292.1| prolyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 575

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 45/134 (33%), Gaps = 6/134 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R  N +   +R   +  G   I  P ++ +D L K     D  
Sbjct: 31  MIRKLTAGIYTYLPLGLRAVNNVARIVREEMDRAGALEILMPAVQPAD-LWKESGRWDFY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +    D   +   L     ++   L R+   ++  +      Y++   FR+E     
Sbjct: 90  GRELLRFVDRHDRESCLGPTHEEVVTDLVRHEIRSYRQLP--VNLYQVQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVG 137
              +  +  + +  
Sbjct: 148 GLMRGREFVMKDAY 161



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 1/107 (0%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI     D  + +K       L  AG+   +     +  G + K AD  
Sbjct: 463 FPPPIAPFEAALINLSPKDETASAKADEIYAALTKAGVETLLDDRDER-PGVKFKDADLI 521

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             P+ +  G    +RG+++ KD   G++    ++           Q+
Sbjct: 522 GLPIQLTLGGKGLARGIVETKDRRTGEKGELPLEGFLEAFMGWREQV 568


>gi|315645695|ref|ZP_07898819.1| prolyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315279173|gb|EFU42483.1| prolyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 576

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 44/137 (32%), Gaps = 6/137 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  +I   IR   +  G   +  P ++ ++ L K     D     
Sbjct: 34  QTAAGIYSYLPLGWRVLRKIEGIIRQEMDAAGAQEMLMPAVQPAE-LWKESGRYDVYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L D   +   L     ++   + R    ++  +      Y+I   +R+E+       
Sbjct: 93  LIRLHDRHDREFVLGPTHEEVITSIVRQEISSYRKLP--VNLYQIQSKYRDERRPRFGLL 150

Query: 127 QFIQCDVDNVGSSAETA 143
           +  +  + +  S     
Sbjct: 151 RGREFLMKDAYSFDRDW 167


>gi|253689709|ref|YP_003018899.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511609|sp|C6DDF6|SYP_PECCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|251756287|gb|ACT14363.1| prolyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 572

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L       D+ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVREEMNNAGAIEVSMPVVQPAD-LWVESGRWDQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 30/111 (27%), Gaps = 3/111 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +   Q LR  GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAKGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
               +    P  I+ G        ++ K    G++   +      +  A +
Sbjct: 520 FADMELIGVPHTIVIGDRNLDSEEIEYKHRRIGEKQMIKTNEIVDFLLANI 570


>gi|315635289|ref|ZP_07890566.1| proline--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476035|gb|EFU66790.1| proline--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 571

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 51/168 (30%), Gaps = 13/168 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G  +      R+  ++ + IR      G   I+ P+++ ++ L +  
Sbjct: 26  MLRAGMIRP-LASGLYNWMPTGWRVLQKVENIIREEMNKSGAIEIKMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D+    +    D   +   +     +    L R    ++  +      Y I   FR+
Sbjct: 84  GRWDQYGPELLRFTDRGERSFVIGPTNEEAITDLMRREVTSYRQLP--LNLYHIQTKFRD 141

Query: 118 E------KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           E            F             S +     M    ++    +G
Sbjct: 142 EVRPRFGVMRSREFIMKDAYSFHMDKESLQQTYEVMYQTYSNIFTRLG 189



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 32/111 (28%), Gaps = 19/111 (17%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M       +  +   + L   G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVQAFAEELYRTLLAQGVEVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           + G ++ K+   G++                    I  ++L+  +K  ++ 
Sbjct: 539 ANGEIEYKNRRSGEK------------------QMIAKAQLIDFLKSQIKA 571


>gi|238927112|ref|ZP_04658872.1| threonine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885092|gb|EEQ48730.1| threonine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 639

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN +LD  R ++  YG+  I TP++  S  L +         + +++ 
Sbjct: 263 GFPFFHPNGMALRNALLDYWREVHRRYGYQEISTPVI-LSRKLWETSGHWFHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLA 92
           +  D +  +++        
Sbjct: 322 EI-DDEDYAIKPMNCPGCM 339



 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 46/122 (37%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +          +   + +   GIR E+    ++  G +++ +  +  P  I
Sbjct: 536 WMAPVQVRILPITERHAEYAEKLYKKMFDCGIRVEID-ERNEKTGYKIRESQVKKTPYTI 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E+  G + ++    G++ S                 T+   + ++ V++ +    
Sbjct: 595 VVGDQEQESGTVAMR--KYGEKNS----------------TTMSSDDFIALVQEKIATRA 636

Query: 494 EE 495
           +E
Sbjct: 637 QE 638


>gi|195391140|ref|XP_002054221.1| GJ24326 [Drosophila virilis]
 gi|194152307|gb|EDW67741.1| GJ24326 [Drosophila virilis]
          Length = 1595

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/477 (11%), Positives = 127/477 (26%), Gaps = 48/477 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL    S  + +      +     L    G  + L 
Sbjct: 978  LIEFVKAKVVNVFRKHGAIEVDSPLLSPLSS--RNINSS--ASSNAVHLMTHSGCVVLLP 1033

Query: 85   YDLTAPLARYVAENFDTIVFPCRT--YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N   ++               N          F            + 
Sbjct: 1034 CDLRTQFARHVTMNGVNLIRRYCVDRVYHEERVFNFHPKQNYECCFDIVTPSTSSQLVDA 1093

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   + + L  +  +  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1094 ELISLAFEITNELPRL--RERNIAIRMNHTNLLRSILIFCNVPKSQYGALFEGFMDFIEG 1151

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      +     ++  S        L +  +    S +     KS+          
Sbjct: 1152 RISRFQFHSSITAIMDKSRTSAQTLMDMLLVNFLLTGSRSSVDESALKSLMRGKGEAASL 1211

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G      L  +  ++  +        I       + +        +       +  + 
Sbjct: 1212 ARGA-----LRELETVIGLAYSLGVTCPIHIWAGLPISFDRASNGGIVWQMTADLKPNRS 1266

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNVP---------ATGFSIGISRLIVALKSLESSTNNIK 373
                 +  G RYD ++  F+ Q                +     L   + ++        
Sbjct: 1267 GHPSVLAKGERYDAMLHEFQKQAQSFNAALPTRGVLSGAGLSFSLDKLVAAVGMEYAKDC 1326

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EMFLGSSKNFGNQ-LKYADRRNCPL 431
                + I         L       ++L + GIR   +          Q L   +R     
Sbjct: 1327 RAIDIGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIVETVGGGGDEAQEL---ERLGALH 1382

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
             I+        G L+++                S+   R  +  +  +ELV  ++K+
Sbjct: 1383 VILVAE----NGALRVR----------------SFERDRFQERHLTRAELVEFIQKM 1419


>gi|169617674|ref|XP_001802251.1| hypothetical protein SNOG_12019 [Phaeosphaeria nodorum SN15]
 gi|111059311|gb|EAT80431.1| hypothetical protein SNOG_12019 [Phaeosphaeria nodorum SN15]
          Length = 779

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/482 (11%), Positives = 125/482 (25%), Gaps = 55/482 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N +   +R  Y N G+  +++P + YS +L K        ++ +F+ 
Sbjct: 350 GSPFFLPHGQIIFNTLQAFLREEYWNRGYQEVQSPNM-YSSALWKVSGHWQHYHEDMFTF 408

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D + +   L+       A                      +R        F    + + 
Sbjct: 409 -DVEKEKWGLKPMNCPGHA-------------LIFKHRERSYRELPIRMADFGVLHRNEA 454

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +                     I    + +    R +         L    + +  
Sbjct: 455 SGALTGLTRVRRFQQDDTHIFCTQDQITEEIFGLFDFLRAVYGKFGFTFKLKLSTRPDGF 514

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  +   +K +    + +     EG      +   GA    +    +   L  + + +  
Sbjct: 515 LGEVETWNKAEAKLTEALNQFTAEGGGQWELNPGDGAFYGPKIDITISDALKREFQCATI 574

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +L   +           EL  ++  V  +     + K                  A    
Sbjct: 575 QLDFQLPNQF-------ELEYMTSEVAAAKPKEEKAKEEPAPKDAPAPVEQKKEAADPNA 627

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P   +  +P     V       G   RF                              + 
Sbjct: 628 PKKIQPPQPGYARPVMIHRAIYGSFERFIAIITEHF---------------AGRWPFWLS 672

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               ++I  M   +D + + Q     LR     A++ +  +     +++ A        +
Sbjct: 673 PRQVMVIPVMPSANDYVKEVQAV---LRKNKFHADIDVSGN-TMQKKIRTAQLSLYNFIM 728

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E+    +  ++                 +  +     +P+ E V  + K+  E K
Sbjct: 729 VVGAEEQKARAVNWRNRDD--------------QATQQRGEIVPLDEAVEKLCKLRDERK 774

Query: 494 EE 495
            E
Sbjct: 775 VE 776


>gi|313901629|ref|ZP_07835066.1| prolyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313468110|gb|EFR63587.1| prolyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 586

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 35/102 (34%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +      R   ++   +R      G   +  P+++ ++ L +      +  + ++ L
Sbjct: 38  GIYEWLPLGRRAVVKVETIVREEMNRKGGLEVGLPIVQPAE-LWRETGRWAQYGEEMWRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D  G+   L     ++   L R    ++  +       +  
Sbjct: 97  KDRHGREYCLGPTHEEIITDLVRATVSSYRQLPLLLYQIQNK 138



 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 4/115 (3%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++     V++     + D     +     L  AG+ A +     +  G +   AD 
Sbjct: 466 IWPMSVAPYHVVVVPVNYAEPDQRQAAERVYGQLLEAGVEAVLDDRDER-PGVKFNDADL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              PL +  G      G +++ + A G+     +    +    RV Q    + EL
Sbjct: 525 IGFPLRVTVGPRGLVEGKVEVVERATGRATPVPVDQAAAEVARRVRQ---ALDEL 576


>gi|332024409|gb|EGI64607.1| Eukaryotic translation initiation factor 2-alpha kinase 4 [Acromyrmex
            echinatior]
          Length = 1616

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 67/438 (15%), Positives = 151/438 (34%), Gaps = 36/438 (8%)

Query: 13   RGFADCPT-KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            RG     + K   ++  +   I  I++ +G   + TPLL     + K +   +     V 
Sbjct: 1017 RGTPSVLSSKRQFLQESVKQKIIEIFQKHGGIYLATPLL-----MPKSIQHSNFTESSV- 1070

Query: 72   SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             L    G  +S+ +DL  P ARYV  N  + +      R+    +     P    +    
Sbjct: 1071 KLMTRTGSIVSIPHDLRTPFARYVVWNNISHIRRYAIERVFRDKKARGFHPRELYECAFD 1130

Query: 132  DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
             +  V ++       + ++     E   I+ +++ + +N+  +L  +L   G+  D   +
Sbjct: 1131 IISPVNNNLMPEAELIFIIWEIFNELPQIREHNFIVRLNHTSLLKAVLMYCGVEKDKYQD 1190

Query: 192  ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
               I+  A D       Q    L+    TD + +       T   +  + S L       
Sbjct: 1191 IYSILQDARDGKLTK-FQVQTHLISLCLTDQAMETLFNLLETESSVTKINSVLRT----- 1244

Query: 252  MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                    +     ++G +++  ++  V   G     I +   +   ++ Y+G +Y+   
Sbjct: 1245 --LTKRKGEAARLAKEGMSDIETVTSNVESLGVKW-PITVVPLLTYNVQQYSGVIYQITC 1301

Query: 312  GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK-------GQNVPATGFSIGISRLIVALKS 364
                   +++      +  GGRYD ++  F+         +     +  GIS  +  L S
Sbjct: 1302 ELK---HRRRRCGQDIIAAGGRYDKMLVSFRKVLERTGMASKEIKQYGAGISISLDKLVS 1358

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSK------YQMYTQMLRTAGIRA-EMFLGSSKNF 417
                     E    +   +  + +S ++           + + + G++   + L +    
Sbjct: 1359 AGVEECEGSESKYGIDVAICCEGNSENEGRGEKDMINILREIWSLGLKVTTLDLCT---M 1415

Query: 418  GNQLKYADRRNCPLAIIQ 435
               L+Y    +    ++ 
Sbjct: 1416 EEILEYCQENSISHIVLL 1433


>gi|331001642|ref|ZP_08325165.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330413363|gb|EGG92730.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 651

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 64/473 (13%), Positives = 130/473 (27%), Gaps = 84/473 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K  ++  ++   I ++ +N +G+   +TPL+  SD   K     D    G+F 
Sbjct: 260 GLPLMLPKGTKMIQKLQRWIEDLEDNEWGYVRTKTPLMAKSDLY-KISGHWDHYQDGMFI 318

Query: 73  LQDD--DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           L D   DG+ ++LR  +T P   YV +N                        G       
Sbjct: 319 LGDPQNDGEILALRP-MTCPFQYYVYKNTQKSYRDLPYRMGETSTLFRNEDSGEMHGL-- 375

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                                         +   + I   +  I     E+   +  +  
Sbjct: 376 -----------------------------TRVRQFTISEGHNVIRPDQAEEELQNCLNLA 406

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
              L +L   D +     +  K   G+   D++      A L +  ++  + F   D E 
Sbjct: 407 IYVLDILGLRDDVTFRLSKWDKNNKGKYLGDDAYWEGTQAALRNILVEKGLPFTEADGEA 466

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           + +     ++      K    + +  +      ++   I  S   VR             
Sbjct: 467 AFYGPKIDIQAKNVYGKEDTMITIQLDAAIAENFDLYYIDQSGAKVRPY-IVHRTSLGCY 525

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                   ++    F +     +   L    K                   LK L+    
Sbjct: 526 ERTLAWLIEKYAGKFPTWLCAEQVRILPISDKYAEYANI-----------VLKELKK--- 571

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                                            G+ A +    ++  G +++ A     P
Sbjct: 572 --------------------------------NGVDATVD-TRTEKIGFKIRDARLSRLP 598

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
             ++ G  E + G + ++    G E S+++ +        +    I   E+  
Sbjct: 599 YMLVVGEKEEAEGSVSVRSRFAGDEGSKKLSDFVDMICKEIRTKEIRKEEVTE 651


>gi|304436955|ref|ZP_07396918.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369906|gb|EFM23568.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 639

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN +LD  R ++  YG+  I TP++  S  L +         + +++ 
Sbjct: 263 GFPFFHPNGMALRNALLDYWREVHRRYGYQEISTPVI-LSRKLWETSGHWFHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLA 92
           +  D +  +++        
Sbjct: 322 EI-DEEDYAIKPMNCPGCM 339



 Score = 41.4 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 38/99 (38%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +       +  +   + +   G+R E+   + K  G +++ +  +  P  +
Sbjct: 536 WMAPVQVRILPITERHAAYAEELYKKMFDLGLRVEVDARNEKT-GYKIRESQVKKTPYTL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E   G +  +   +       + +  +  + ++A
Sbjct: 595 VVGDQEMESGTVAFRKYGEKDSTVLPVADFIALVQEKIA 633


>gi|50122450|ref|YP_051617.1| prolyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81827028|sp|Q6D1B9|SYP_ERWCT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49612976|emb|CAG76427.1| prolyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 572

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L       D+ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVREEMNNAGAIEVSMPVVQPAD-LWVESGRWDQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 3/111 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +   Q LR  GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFHVAILPMNMHKSFRVKEVAEDIYQQLRAKGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
               +    P  I+ G        ++ K+   G++   +      +  A +
Sbjct: 520 FADMELIGVPHTIVIGDRNLDSEEIEYKNRRVGEKQMIKTSEIIDFLLANI 570


>gi|159473701|ref|XP_001694972.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158276351|gb|EDP02124.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 86

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 30/86 (34%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++   ++           +      S    +       L  AG++AE     +    + L
Sbjct: 1   MRERAAAAGKPLRAIETEVLVGSIGSGLQQRRMALCAELWAAGVKAEFGYKPNPKMADNL 60

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI 447
            Y      P  ++ G  E +RG+++I
Sbjct: 61  GYCHEHQVPFMVLFGEDEVNRGVVKI 86


>gi|24213811|ref|NP_711292.1| ATP phosphoribosyltransferase regulatory subunit [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45658405|ref|YP_002491.1| ATP phosphoribosyltransferase regulatory subunit [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|46395865|sp|Q8F737|HISZ_LEPIN RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|54037292|sp|P62359|HISZ_LEPIC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|24194643|gb|AAN48310.1| ATP phosphoribosyltransferase regulatory subunit [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45601648|gb|AAS71128.1| ATP phosphoribosyltransferase regulatory subunit [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 344

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 65/358 (18%), Positives = 136/358 (37%), Gaps = 40/358 (11%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P GF     ++ + R  +L++I  + +  G+  +  P  +YS +  + +   D  +  +
Sbjct: 14  IPDGFHFLGPEDSKYRRTLLETISGVLKKKGYSEVFLPAFDYSSTFIQTVSAPD--SSSL 71

Query: 71  FSLQDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           F ++D  G  IS     DLT    + +A  F         + IG VFR    G    ++ 
Sbjct: 72  FRIRDLSGNEIS--PSIDLTVQAVKGMA-GFSHQRENQNIFYIGRVFRESTKGSVARKEI 128

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +++G S +    ++   + + +  +    N   + + N  +   I+++       
Sbjct: 129 LQIGAESIGVSGKENTFKILEELDEIISLL-PLENKLTLVLGNVNLFQSIVQEF------ 181

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL---S 245
                        +L +  ++ +  LL +   +            ++ I ++ S +    
Sbjct: 182 -------------ELKQNEIEILSKLLYQKNVNEIQKIFGEKKNHTDLIRLLSSLVLNFD 228

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           ++  K+   +  L K          E         +S      + I  +++R L YYTG 
Sbjct: 229 LNSLKNSLNINSLSKNLQKSLSSILEETYWIFNSWESKKRRIDLCIDFSLLRDLNYYTGF 288

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           V++  L                V  GG YD L   F G    A+G+++ ++ L  +LK
Sbjct: 289 VFQGYLQDSP----------DPVLTGGTYDHLYEMFSGVQKNASGYALMVNTLESSLK 336


>gi|222823074|ref|YP_002574647.1| threonyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254783514|sp|B9KEB1|SYT_CAMLR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222538295|gb|ACM63396.1| threonyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 603

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 45/98 (45%), Gaps = 1/98 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +    +     +   + L   GI +E++   +++   +++ A++ + P+ ++ G
Sbjct: 505 PTQVAIVPISQNHHEYAKEIAKKLLELGIDSEVY-SKNESLNKKIRTAEKAHVPMILVLG 563

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             E +   + ++D    ++ +  +    +  + +++++
Sbjct: 564 DEEVANKSVALRDRRAKEQKTLTLDEFITLTKEKLSEV 601


>gi|288574734|ref|ZP_06393091.1| ATP phosphoribosyltransferase involved in histidine
           biosynthesis-like protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570475|gb|EFC92032.1| ATP phosphoribosyltransferase involved in histidine
           biosynthesis-like protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 408

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 78/434 (17%), Positives = 143/434 (32%), Gaps = 64/434 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     +R  LP G      +      R      +++  +G+    +  L+  ++    L
Sbjct: 1   MTSSRSMR-RLPAGCRSTGGRMAIAMERCRHRFISLFNRHGYRLFWSSGLQLLETSWDLL 59

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           P   R +  V  L    G+   LR D+T     Y+A ++     P R      ++RN   
Sbjct: 60  PRTIRESLLV--LTSPMGEPCCLRSDITLAAVNYLANHYSPQERPLRMCYADRLYRNPAP 117

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           G     +  Q   + +G   E AD E+  ++ + L+++G+      +          +++
Sbjct: 118 GGD--LEKFQIGAELLGWEGEGADVEILSLLLEGLDSLGLIDGKLVLSDVT------LVD 169

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 D++L                    +   L EG          G      ++   
Sbjct: 170 NAMEKLDEEL-----------------KSDLLKALQEGSYRTYFKLLSGCRSKENRLLEA 212

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  L     + + E  +L      G +    L  ISE++ + G  S+RI      +R L+
Sbjct: 213 LPELKG-GPEVLDEARKL-----TGAESLRSLDNISEILGRMG-KSDRIAFDLGSIRELD 265

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YY+G V++        +          +GGGGRYD L+         + G S       +
Sbjct: 266 YYSGPVFDVYSPESGKS----------LGGGGRYDSLLG--------SYGLSGQAIGFGL 307

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM---FLGSSKNF 417
            L+ L   +        V I       D +            AG+  E+     G S   
Sbjct: 308 DLEELARHSIYRNPEPIVAIKGGGTPPDLV---LSRCSAFHDAGLTTEITWSHDGDSG-- 362

Query: 418 GNQLKYADRRNCPL 431
              +  A  +    
Sbjct: 363 ---MARAKAKGYSW 373


>gi|28378679|ref|NP_785571.1| prolyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556877|ref|YP_003063294.1| prolyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300768192|ref|ZP_07078097.1| proline--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308180820|ref|YP_003924948.1| prolyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|81840975|sp|Q88VK1|SYP_LACPL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28271515|emb|CAD64420.1| proline--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045804|gb|ACT62597.1| prolyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300494256|gb|EFK29419.1| proline--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308046311|gb|ADN98854.1| prolyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 569

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 66/529 (12%), Positives = 133/529 (25%), Gaps = 76/529 (14%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+   I   IR   E      +  P +  ++ L K     +     
Sbjct: 34  QISAGMYAYLPLAYRVLTNIEKIIRQEMEKIDAAEMLVPAVIPAE-LWKATGRYETYGPE 92

Query: 70  VFSLQDDDGQWISLRY--DLT-APLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +F L++   +   L    + T   + R   +++  +          YR     R      
Sbjct: 93  LFKLKNRHDREFILGPTHEETFTSIVRDEIKSYKRLPLTLYQIQAKYRDEDRPRYGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
             F            +S +    +M     +  E VG+K              D      
Sbjct: 153 REFIMKDAYSFHADEASLDDTFQDMAQAYQNIFERVGLKFRSIIGDGGAMGGKDSREYSA 212

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV- 241
                +              L+      V         D     T G     E  + +  
Sbjct: 213 IAPVGEDTIVYSDASDYAANLEMARSLYVPKKSHASLKDMEKIDTPGVGTIDELAEFLKV 272

Query: 242 ---------------------------------------SFLSIDLEKSMHELYELVKGT 262
                                                   FL +   +   +      G+
Sbjct: 273 GADQLVKSILFIADDQPVMALVRGDHEVNDVKLKNYLGADFLEMATPEQAQQYLGASFGS 332

Query: 263 IAGEKGFNELVVISE-LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
           +      +++ ++++  V+     +            +        EA +    + E + 
Sbjct: 333 LGPVNVHDDVKIVADQYVKDMVNITVGANEDGHHFTNVNPERDFHAEAYVDIRFVQEGEL 392

Query: 322 PVVFGSVGG-------------GGRYDG------LVSRFKGQNVPATGFSIGISRLIVAL 362
                 V               G RY        L +  +   V    + IG+SRL+ A+
Sbjct: 393 SPDGAGVLKFTKGIEIGHIFKLGTRYSKDLHAEVLDANGRNIPVIMGCYGIGVSRLLSAI 452

Query: 363 KSL-----ESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                               V +  +    +D +         L  AG    ++    + 
Sbjct: 453 AEQRADENGLIWPKAIAPFDVHVIPVNPKKADQVEVADQVEAQLEAAGYNV-LYDDRKER 511

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            G +   +D    P  I  G    S G+++IK    G+ L  + +   +
Sbjct: 512 PGVKFADSDLMGIPARITIGKK-ASEGIVEIKLRQTGETLEVKQEEIAN 559


>gi|251788479|ref|YP_003003200.1| prolyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537100|gb|ACT05721.1| prolyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 572

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +    D   +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFVDRGDRPFVLGPTHEEVITDLIRNEISSYKQLPLNFYQIQTK 138



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +   Q LR  GI   +     +  G  
Sbjct: 461 DDRGIIWPDAITPFQVAILPMNMHKSFRVQEVAEGIYQQLRANGIDVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K   KG++   +  +   +  ++ A
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIVEFLLSQCA 571


>gi|329945633|ref|ZP_08293366.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528636|gb|EGF55601.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 683

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                LR  G+R E+     + FG +++ A +   P  +
Sbjct: 572 WLSPVQVRLIPVAEAFDDYVDDVAAQLRAQGVRVEVDHSDDR-FGKKIRNASKDKIPFTL 630

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +   G +  +    G++ +                  + + E V+ +  ++    
Sbjct: 631 IAGGEDAEAGAVSFR-FRDGEQTNG-----------------VAVKEAVAHIVSVIDARI 672

Query: 494 EE 495
            +
Sbjct: 673 ND 674


>gi|331087039|ref|ZP_08336114.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330409489|gb|EGG88932.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 564

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/564 (10%), Positives = 137/564 (24%), Gaps = 103/564 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK+        G         R+  +I + +R   +  G   +  P +   +   K  
Sbjct: 31  MIKKSS------SGIYMIMPMGKRVLKKIEEIVREEMDAAGAQELLMPAMIPEEIYEKS- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +     +F+L+D   +   L     +L             +                
Sbjct: 84  GRREAFGSNMFALKDRYQKNYVLGPTHEEL---FTMAAMMKGSSYKDFPYNLYQIQTKFR 140

Query: 118 EKHGPGR---------FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR------ 162
           ++  P            +     D+D  G                    +  K       
Sbjct: 141 DETRPRYGLIRVREFIMKDAYSFDIDEAGLHESYMKMFHAYQNIMERCKLNYKIVKADTG 200

Query: 163 -----------------NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
                             D  +  +       +     +   +  +    V+  ++  + 
Sbjct: 201 AMGGSLSEEFQAITDIGEDVIVTCDGCDFSSNLEITEVIDVSEPSDAEEQVMEVVETPNA 260

Query: 206 FGLQGVKLLLGEGRTD-----------NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
             ++ V     +   +            +  F    N    +  ++    + ++E +  E
Sbjct: 261 RTMEEVAAFFHKSVNEFVKTLIYTVDGKTMAFLLKGNRELNETKVLKLLKANEMELAPFE 320

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             E V     G  G   L     + R+     N I  ++     +       +E  +   
Sbjct: 321 EVERVTHAKVGFAGPVGLECPIVMDREVTNMKNFIVGANKTDHHIVNVNLKDFEVEIVAD 380

Query: 315 VMNEKQKPVVFGS-----------------------VGGGGRYDGLVSRFKGQNVPATGF 351
           +    +  V                              G  Y  + ++     +   GF
Sbjct: 381 IAQVHEGDVCPVCGKPLKFCKGIEVGNTFKLGTKYAKTLGLEYQDVDNKLHPVEMGCYGF 440

Query: 352 SIGISRLIVALKSLE----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            +      +  +  +        ++      ++     D + +       + L+  GI  
Sbjct: 441 GLERCMAAIVEQHNDEAGIIWPASVAPFEVAVVVVSSKDEEQMRIGSELYEALKKEGIDV 500

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            +     +  G + K  +    P  I  G      G ++ +                   
Sbjct: 501 LLDDRKER-PGVKFKDMELIGIPYRITVG-RGIQEGKVEFR------------------A 540

Query: 468 EARVAQITIPISELVSTVKKILQE 491
                   I + E++  VK+ LQ+
Sbjct: 541 RTAAENREIALGEVIKLVKEELQK 564


>gi|289620774|emb|CBI52508.1| unnamed protein product [Sordaria macrospora]
          Length = 792

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/473 (10%), Positives = 114/473 (24%), Gaps = 58/473 (12%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +RI N I++ I+  Y   G+D + TP + ++ SL +           +F L D D
Sbjct: 344 WLPHGMRINNAIMEYIKEEYWKRGYDEVMTPNM-FNTSLWEQSGHLAHYKDDMFIL-DVD 401

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +   L+               +               +        F    + +     
Sbjct: 402 KEQFGLKP-------------MNCPAHAMMFRHRDRSHKELPLRLADFGVLHRNEASGAL 448

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           S                     IK     +    +     +     L    +  + +  +
Sbjct: 449 SGLTRVRRFQQDDAHIFCREDQIKAEVADLFDFMKSFYGMLGLTFKLKLSTRPEKYMGEI 508

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ +    + +             +FT     T E  +   +F    ++ ++ +   
Sbjct: 509 ETWDRAEARLKEAL------------NEFTASTGGTWELNEGDGAFYGPKIDIAVLDCLN 556

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                                ++          +                      P   
Sbjct: 557 RP--------------WQCATIQLDFQQPINFSLEYMTAETQAKQDESKLAPKAPEPEAP 602

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEM 375
           ++++    G                G   P        G      A+ +   +      M
Sbjct: 603 KEEEAPKEGEDKKKKPLLVKKPLAPGCARPVMIHRAMAGSIERFTAILAEHFAGKWPFWM 662

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
            P  +  +      L   +     L+   I  ++   S      +++ A         + 
Sbjct: 663 SPRQVMVIPVGMGFLDYAKEVALTLKKEKIHVDVD-SSGNTLQKKIRSAQLAQYNFIFVV 721

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           G  E++   + I+                     +   +  P+SE V  ++ +
Sbjct: 722 GDDEKTNRKVNIRYRDD--------------TSTQARDVPYPLSEAVDKLRAL 760


>gi|85717006|ref|ZP_01047968.1| prolyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85696130|gb|EAQ34026.1| prolyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 439

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/473 (11%), Positives = 116/473 (24%), Gaps = 82/473 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  +I   +R      G   +  P L+ +D   +        
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLKKIEAIVREEQNRAGAIELLMPTLQLADLWRESG------ 84

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                            RYD                           + R +        
Sbjct: 85  -----------------RYD----------------------AYGPEMLRIQDRHKRELL 105

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                +            +   + +         +          R     + +      
Sbjct: 106 YGPTNEEMITEIFRGYIRSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDI 165

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ-----GVKLLLGEGRTDNSGDFTKGAN-------LTS 234
           D+    R      +  L  F         ++   G    D S +F   A        +  
Sbjct: 166 DEAGARRSYNKMFVAYLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDK 225

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + +D+ V    +D +  +  + +      A  +         ++     Y     +    
Sbjct: 226 DVLDLPVPGTDVDYDGDLTPIVKQWTVAYAATE---------DVHDGPRYEREVPEERRV 276

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
             RG+E      +       +      P        GG Y               G S  
Sbjct: 277 HTRGIEVGQIFYFGTKYSDSMKTLVTGPDGVEQPIHGGSY-------------GVGVSRL 323

Query: 355 ISRLIVALKSLESSTNNIK-EMGPVLITTMDHDS-DSLSKYQMYTQMLRTAGIRAEMFLG 412
           +  +I A                 V I  +   + D+ +  +   + L   GI   ++  
Sbjct: 324 VGAIIEACHDEGGIKWPDAVAPFRVAILNLKQGAGDTDAACERIYRELSAKGIDV-LYDD 382

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           + +  G +   AD    P  ++ G    + G ++IK    G   +  +++  +
Sbjct: 383 TDQRAGAKFATADLIGIPWQVMVGPKGLAEGKVEIKRREDGSRENVALEDVVA 435


>gi|291295577|ref|YP_003506975.1| threonyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470536|gb|ADD27955.1| threonyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 652

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 39/99 (39%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+    +      L   Q     +R   +R E+   S +    +++ A+ +  PL +
Sbjct: 552 WLSPIQAVIVPIADRHLEYAQKVAAEMRKNRLRVEIDDRSER-MNAKIRDAELQKIPLIL 610

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E   G + +++    ++ +  +       +ARV 
Sbjct: 611 VVGDKEAEAGTVNVRERHVKEQRTLAVAALIEEMKARVE 649



 Score = 39.8 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 27/77 (35%), Gaps = 1/77 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      +   IR ++ D +    + +G+  + TP +  +                +++
Sbjct: 271 KGLPLWLPRGAFIRRQMEDYMYQKEQEHGYHYVYTPHIANARLYYTS-GHLPYYKDDMYA 329

Query: 73  LQDDDGQWISLRYDLTA 89
             + +G+   L+     
Sbjct: 330 PIEIEGEEYYLKPMNCP 346


>gi|313202757|ref|YP_004041414.1| ser-tRNA(thr) hydrolase; threonyL-tRNA synthetase [Paludibacter
           propionicigenes WB4]
 gi|312442073|gb|ADQ78429.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Paludibacter
           propionicigenes WB4]
          Length = 648

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/461 (10%), Positives = 116/461 (25%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      +   +R R+ D ++ I   + +  + TP                  NK ++ 
Sbjct: 261 KGLPMWLPRGTALRLRLEDFLKKIQRRFDYQQVMTPH---------------IGNKQLY- 304

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                             G + ++ +  
Sbjct: 305 -----------------------------------------------VTSGHYAKYGKDS 317

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              + +  E  +  +  M       +   +   +  +  R    G + +    G+     
Sbjct: 318 FQPIHTPEEGEEYLLKPMNCPHHCEIYKFKPRSYKELPVRLAEFGTVYRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK    +        F        E    +    + +     
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKDEFLKVMDIIFIIFNALEFENFEAQISLRDPNNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  + +I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DENWEKAEQSIIEACAEKGLKARVETGEAAFYGPKLDFMVRDAIGRKWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   E +              D    R    +    G    + R +  L    +    
Sbjct: 495 NLPERFELEYTGE----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 541

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +              + +    IR ++    ++  G +++  + +  P 
Sbjct: 542 LW-LTPDQVVILPISEKFNDYAFQIAKEMNAQDIRVQVD-DRNEKIGRKIRDNELKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +I G  E   G + ++   +G + + ++ +        V 
Sbjct: 600 MLIVGEKEAENGEVSVRRQGEGDKGTMKVADFSKLILDEVD 640


>gi|221633051|ref|YP_002522276.1| threonyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156502|gb|ACM05629.1| threonyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 596

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 62/438 (14%), Positives = 123/438 (28%), Gaps = 26/438 (5%)

Query: 48  PLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPC 106
           P  E  D+    L + +R +          G+ + L  +D TAP   Y        +   
Sbjct: 175 PTREQLDAYLHRLEEAERRDHR------RLGRELELFHFDPTAPGMPYWLPKGLK-ILNL 227

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
                        +            +  V    +     M ++  D     G+K  +  
Sbjct: 228 LLDFWRQEHEKRGYQEIAAPLINDKSLWEVSGHWDHYRENMFLIQLDEHLTYGVKPMNCP 287

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
             +        + ++       +L++  I+ R        GL  V+    + + D++  F
Sbjct: 288 NAMIVYN----LKKRSYRDLPLRLSDCDILHRYERSGTLHGLLRVR----KFQQDDAHIF 339

Query: 227 TKGANLTSEQIDIM---VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                +  E   I+     F  I   +    L       +   + +++     + +    
Sbjct: 340 VTEDQIEEEFARILEIAQLFYGIFGLRYTLRLGTRPADFMGDPETWDKAEAALQRILDRH 399

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
                  I              + E  LG        +         G  Y       K 
Sbjct: 400 AGPGNYLIGEGEGAFYGPKIDILMEDALGRQWQTGTIQLDFQLPRRFGCTYTDRDGTEKT 459

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
             V        + R I  L    +    +  + PV  T +      L         LR A
Sbjct: 460 PVVIHRVIYGSLERFIGILIEHFAGAFPVW-LAPVQATIIPIADRHLPYAYRVRDRLRDA 518

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G+R E+  G  +    +++ A  +  P  ++ G  E +   L ++ L   +     I + 
Sbjct: 519 GLRVEVDDGDER-MQAKIRSAQLQKIPYMLVVGDREVNEESLAVR-LRTNE----NIGSM 572

Query: 464 ESWREARVAQITIPISEL 481
              R   + Q  +    L
Sbjct: 573 SIERFITMVQRLVAEKSL 590



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K ++I N +LD  R  +E  G+  I  PL+    SL +     D   + +F
Sbjct: 213 GMPYWLPKGLKILNLLLDFWRQEHEKRGYQEIAAPLI-NDKSLWEVSGHWDHYRENMF 269


>gi|297584075|ref|YP_003699855.1| prolyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142532|gb|ADH99289.1| prolyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 567

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 9/103 (8%), Positives = 32/103 (31%), Gaps = 4/103 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++  ++   +R   +  G   +  P ++ ++ L +     D     +  
Sbjct: 37  SGVYSFLPLGYKVLQKVEAIVREEMDRAGAQEMFMPSIQPAE-LWQESGRWDDYGAELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            +D   +  +L     ++   + R    ++  +       +  
Sbjct: 96  FKDRHQREFALGPTHEEVITAIVRDDIRSYKELPMTLYQIQTK 138



 Score = 40.6 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 34/99 (34%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++      LI       +  +  +     L+ +G+         +  G + K +D 
Sbjct: 463 IWPLSVAPFQAHLIPVNIKQDEQKALAESLYTELQESGLDILFDDRQER-PGVKFKDSDL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G      G++++K    G+ +     + ++
Sbjct: 522 LGLPIRVTIGKK-AGEGIVEVKYRKSGETVEVHRDDLKN 559


>gi|33861457|ref|NP_893018.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
 gi|46395723|sp|Q7TU96|HISZ_PROMP RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|33634034|emb|CAE19359.1| possible Histidyl-tRNA synthetase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 383

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 62/385 (16%), Positives = 127/385 (32%), Gaps = 46/385 (11%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSL-GKFLPDEDRPNKGVFSLQDDDGQWISLRYDL 87
           I++ + N+Y+ +G++ I    +   +++ G+ + D D     V          + LR ++
Sbjct: 18  IVNDLNNVYKLWGYEEISPSFINNLETIKGREVIDGDELIGIV------SNSSLCLRPEM 71

Query: 88  TAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM 147
           T  + +  +        P R +  G VF  ++     ++            S +T   E+
Sbjct: 72  TTSIVKLTSTRLLNKKRPIRLFNSGIVFNKKQSYKNTYKFQENLQSGIELISYDTQYPEI 131

Query: 148 CMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFG 207
            ++                        L   ++ I L     L   +   + +D +    
Sbjct: 132 EVINI----------------------LFDAIDNINLIDSCNLTLLVSTTKIMDLILFNY 169

Query: 208 LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK 267
                  + +   +   +     N+ +    I+   L    E ++  + + +K       
Sbjct: 170 KNNNYEEIKKCMVNLDHESLDKLNIDNNDKAILKELLFTRGEPAI--ILKKLKNIYGNNN 227

Query: 268 GFNELVVISELV-RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
              EL  +   + + S   + +I++  T    L  Y G V++ I             V  
Sbjct: 228 VIEELDCLFNTLSKISKKYNIKIQLDPTYQPHLNLYAGIVFQLICDNKN--------VKT 279

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
            +  GGRYD LV  F        G    I   I  L+ L       K      +  +  +
Sbjct: 280 IIAKGGRYDELVRYFNPNEKIINGIGFTI--SIDNLREL----IVEKSQTKKKVLLLFKN 333

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFL 411
           S  L K     + L+  GI   ++L
Sbjct: 334 SYLLDKGINEQKALQKKGIITILYL 358


>gi|257459979|ref|ZP_05625083.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442420|gb|EEV17559.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 607

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 54/143 (37%), Gaps = 3/143 (2%)

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           G  D    + +   +           + + L+              V I  +       S
Sbjct: 466 GYIDENNEKKQPVMLHRAILGSFERFVGILLEHTAGELPFWICPTQVSIVPIG--EAHAS 523

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +    +LR A I  E+ L  ++    +++ A+++  PL I+ G  E S   + ++D  
Sbjct: 524 YAKEILNLLRAADIDGEI-LDRNETLNKRIRTAEKQKVPLIIVLGDNEVSARSVALRDRR 582

Query: 452 KGKELSREIKNNESWREARVAQI 474
             ++ +  +    ++ +A++ ++
Sbjct: 583 AREQRNLGLDEFLNFVKAKLNEV 605


>gi|307702092|ref|ZP_07639099.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307707425|ref|ZP_07643907.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616377|gb|EFN95568.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616579|gb|EFN95769.1| threonyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 647

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/382 (12%), Positives = 98/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + +      A +A
Sbjct: 619 GQKETQTVSVDDFVQAILADIA 640



 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|300870146|ref|YP_003785017.1| threonyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300687845|gb|ADK30516.1| threonyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 643

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 79/259 (30%), Gaps = 8/259 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     L  E I+ +  +LS+  +    +    V    A   G +E+  ++    
Sbjct: 379 DDAHIFCTEEQLGDEIINTIEYYLSVYKDFGFKDFEIFVSTRPAKSIGSDEIWELATKSL 438

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV-----FGSVGGGGRYD 335
            +  +   I        G  Y     +          +     V               D
Sbjct: 439 MNALDKLGISYKVNEGDGAFYGPKIDFNIKDVLDRNWQCGTLQVDFSLPMRFEISYEGKD 498

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G        +    G       + + ++              V +  + ++   +++   
Sbjct: 499 GKKHTPVMLHRAILGSM--ERFIGILVEHYNGKFPLWLSPIQVAVVNVLNEEAQINRVHE 556

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             + L+ AG R E+   S+ N G ++K    +  P  +I G  E S G L I+  +  + 
Sbjct: 557 VAKKLKEAGFRVEID-ESNDNLGTKIKKYRLQRTPYTVIIGAEEVSNGKLSIRTRSSQEI 615

Query: 456 LSREIKNNESWREARVAQI 474
              ++       +    + 
Sbjct: 616 KDMDLTEFMEKLQKESKER 634



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + I   +   IRN  +  G+  I+TP +   +   +     D   + ++  
Sbjct: 259 GFPFWHPNGMIIYKAVESYIRNENDKRGYVEIKTPAILNEELWHRS-GHWDNYKENMY-F 316

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 317 TEIDDTKYAVKPMNCPG 333


>gi|154495989|ref|ZP_02034685.1| hypothetical protein BACCAP_00272 [Bacteroides capillosus ATCC
           29799]
 gi|150274872|gb|EDN01928.1| hypothetical protein BACCAP_00272 [Bacteroides capillosus ATCC
           29799]
          Length = 586

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV ++ +     +         +L  AG R E+    ++  G +++ A  +  P  +
Sbjct: 484 WLSPVQVSILPITDRTAQYADEVKALLEKAGFRVEVDH-RNEKIGKKIREAQLKKVPYML 542

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E     + +++ A G + +  +    +     V Q  I
Sbjct: 543 VLGDKEAEGATVAVRNRAGGDQGAMSLDEFINILREEVEQKII 585



 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN ++D  R I++ YG+  I TP++       +     D     +++ 
Sbjct: 211 GFPFFLPNGMVLRNTLIDYWRQIHKKYGYVEISTPMMLNRQLWERS-GHWDHYKNNMYTT 269

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 270 VI-DGEDFAIKPMNCPG 285


>gi|297617181|ref|YP_003702340.1| prolyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145018|gb|ADI01775.1| prolyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 567

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  +I++ +R   +  G   +  P+++  + L       +  
Sbjct: 31  MVRKTAAGIYTYLPLGFRVIKKIMNIVREEMDRAGGQEVGLPIIQPRE-LWAQSGRWEVY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F L+D   +   L  
Sbjct: 90  GDEMFRLKDRHQRDFCLGP 108



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 19/125 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +++     D   +         L   G    +     +  G + K AD 
Sbjct: 461 IWPLAIAPYQIIIVPVNSKDGQQMEIGMKLYHELVKQGYEVIIDDRDQRA-GVKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ I  G      G ++IK                  +        +PI  + + V+
Sbjct: 520 IGVPVRITIGPKLLKAGQVEIK------------------KRWENEVKGVPIEHVSTEVR 561

Query: 487 KILQE 491
            IL+E
Sbjct: 562 SILRE 566


>gi|289705162|ref|ZP_06501565.1| proline--tRNA ligase [Micrococcus luteus SK58]
 gi|289558106|gb|EFD51394.1| proline--tRNA ligase [Micrococcus luteus SK58]
          Length = 608

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 1/99 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +       D L+  +     L   G+   +      + G + K
Sbjct: 497 DDKGLAWPRAVAPADVHVVVATKGEDGLAAAETLAAGLEAEGLTVLVDDRPKVSPGVKFK 556

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            A+    P A++ G    + G L++KD A G+     + 
Sbjct: 557 DAELIGVPTAVVVG-RGLADGELELKDRATGEARPVPVD 594



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++  ++   +R   +  G   +  P L   +         D    G+F L
Sbjct: 40  GIYSWLPLGLKVLAQVERIVREEMDAIGAQEVHFPALLPREPYEA-TGRWDEYGDGLFRL 98

Query: 74  QDDDGQWISLRY 85
           QD  G    L  
Sbjct: 99  QDRRGNDYLLAP 110


>gi|124515073|gb|EAY56584.1| Prolyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 422

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 40/153 (26%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   ++   IR    + G   +  P L+ SD L +           +F L
Sbjct: 38  GVYSYLPMAVRALRKVESIIREEMNSAGGQEVLLPALQPSD-LWEKTGRWQAYGPELFRL 96

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            D   +  +L         DL + + R   +           +R     R        F 
Sbjct: 97  HDRHERAFALGPTHEEVITDLVSQIIRSYRQLPFLAYQIQTKFRDERRPRFGILRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                       +A    A M          +G
Sbjct: 157 MKDAYSFSASEENARQIYARMQEAYGRIFLRLG 189



 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%)

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + + AD R  P  +I G     +G  ++K    G+ L   +++  +   ARV  I
Sbjct: 364 KFQDADLRGFPFQVILGDRHVDKGNGEVKIRRTGERLVLPLRDIPALLSARVQGI 418


>gi|307709563|ref|ZP_07646017.1| threonyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619694|gb|EFN98816.1| threonyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 647

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/382 (12%), Positives = 98/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + +      A +A
Sbjct: 619 GQKETQTVSVDDFVQAILADIA 640



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|254462200|ref|ZP_05075616.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacterales
           bacterium HTCC2083]
 gi|206678789|gb|EDZ43276.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 354

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 114/354 (32%), Gaps = 34/354 (9%)

Query: 32  SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL 91
            +R  +E  G  P+ET +L+ + +L     ++ R    + S      Q   LR D T P+
Sbjct: 10  QLRAHFEQLGALPVETSILQPAGTLLDLYGEDIRGRAYITSDALRGEQM--LRPDFTVPV 67

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
              V  + +    P R    G VFR +     R  ++ Q   +    +   +        
Sbjct: 68  ---VQMHMEAGADPARYTYAGTVFRRQDDEESRPNEYTQVGYEMFDRAEPISADAEVFAS 124

Query: 152 ADT---LEAVGIKRNDYHIGINNRKILD-------GILEKIGLHGDDK--LNERLIVLRA 199
                    V     D  I +     L+        +L  I      +  L +      A
Sbjct: 125 ITQALGAAPVKAATGDIGILVAAVSALETSEARKGALLRHIWRPQKFRALLEQFSTPSVA 184

Query: 200 IDKLDKFGLQGV--------KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID--LE 249
            D L                +    + R D      +   ++   +D++ + L+I   L 
Sbjct: 185 RDVLGLDNPFENAGPEIGLRRTSDVKDRLDELRADAQITPISKTVVDLLDALLNIRAMLP 244

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
            ++ +L++L     A       L      ++  G +  +I+ +++  R        + E 
Sbjct: 245 LAVAQLWDLAVEMPAIGPAVERLGARMIALKTRGVDIEKIEFATSYGRS-------LMEY 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             GF      +       +  GGRYD L  +            +    L++ L+
Sbjct: 298 YDGFVFGFYAETRTDLPPIATGGRYDALTKQLGQGAEIPAVGGVIRPDLLLDLE 351


>gi|154253109|ref|YP_001413933.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|189083615|sp|A7HWJ3|SYT_PARL1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|154157059|gb|ABS64276.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 652

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/453 (12%), Positives = 113/453 (24%), Gaps = 81/453 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RI   +   +R   +  G+  + TP L       +      +  + +F +
Sbjct: 262 GSVFWHPKGWRIWQALEQYVRRRIDAAGYVEVRTPQL-LDSKFWEQSGHWGKYRENMFVV 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D                                          E          +    
Sbjct: 321 PD------------------------------------------EVPSTDEDAPVLSGKA 338

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +        A + +          +       G  +R    G L  +      ++ + 
Sbjct: 339 KLMAIKPMNCPAHIQIFKQGVKSYRDLPLRMAEFGCCHRNEPHGALHGLMRV--RQMTQD 396

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +   K   +    LL     D     TK    T   +           EK++ 
Sbjct: 397 DAHIFCTEDQIKEETEAFVALLESVYEDMGFTGTKLRLATRPDVRAGTDETWDKAEKALE 456

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E  + +        G                      +   I R  +  T    +     
Sbjct: 457 EALKALGKEFDFAPGE----------GAFYGPKLEFHLRDAIGRSWQLGTL---QLDFVL 503

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P   +       G+              +   +           + + +++ E       
Sbjct: 504 PERLDASYIGEDGNK------------HRPVMLHRAILGSLERFIGILIENYEGRFPMWL 551

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR----NC 429
                ++TT+  D+D     +   Q LR AGIRAE+ L + K     + Y  R       
Sbjct: 552 APVQAVVTTITSDAD--PYAEEMLQKLRDAGIRAELDLRNEK-----INYKVREHSVAKV 604

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           P   + G  E   G + I+ L   ++ + ++  
Sbjct: 605 PAIFVAGKREAEEGTVSIRRLGSQQQQTMKLDE 637


>gi|322377382|ref|ZP_08051873.1| threonine--tRNA ligase [Streptococcus sp. M334]
 gi|321281582|gb|EFX58591.1| threonine--tRNA ligase [Streptococcus sp. M334]
          Length = 647

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/382 (11%), Positives = 104/382 (27%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT  +    +S    + ++   +  ++ +      +   + 
Sbjct: 397 EEFQRALQL-IIDVYEDFNLTEYRF--RLSLRDPEDKEKYFDNDQMWENAQTMLRAALD- 452

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +  +     G  +         V+        +    L F +                 
Sbjct: 453 EMGVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + +      A +A
Sbjct: 619 GQKETQTVSVDDFVQAILADIA 640



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/186 (10%), Positives = 49/186 (26%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA---PLARYVAENFDTIVFPC----RTYRIGPVFRNEKHGPGRF 125
            D   G+   LR         + ++   ++  +          +R             R 
Sbjct: 321 MDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVRE 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +        ++ D  E   +    + + + + +  +   +   + 
Sbjct: 381 MSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFNLTEYRFRLSLRDPEDKEKYFDNDQMW 440

Query: 186 GDDKLN 191
            + +  
Sbjct: 441 ENAQTM 446


>gi|325140439|gb|EGC62960.1| prolyl-tRNA synthetase [Neisseria meningitidis CU385]
          Length = 599

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 50/166 (30%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 55  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 112

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 113 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 172

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +T   +M          +G
Sbjct: 173 RPRFGVMRAREFVMKDAYSFHADYASLQTTYQDMYDAYCRIFTRLG 218


>gi|320534417|ref|ZP_08034899.1| threonyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320133364|gb|EFW25830.1| threonyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 678

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 43/122 (35%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +        LR  G+R E+     + FG +++ A +   P  +
Sbjct: 567 WLSPVQVRLIPVAEAFDTYVDDVAARLRAKGVRVEVDHSDDR-FGKKIRNASKDKIPFTL 625

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +   G +  +    G++ +                  +P+ E V+ +  ++    
Sbjct: 626 IAGGEDAEAGAVSFR-FRDGQQTNG-----------------VPVEEAVTHIVSVIDARI 667

Query: 494 EE 495
            +
Sbjct: 668 ND 669


>gi|269137906|ref|YP_003294606.1| prolyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267983566|gb|ACY83395.1| prolyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304557958|gb|ADM40622.1| Prolyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 572

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ N++ + +R      G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLNKVENIVREEMNYAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +    D   +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFVDRGDRPFVLGPTHEEVITDLVRNEISSYKQLPLNFYQIQTK 138



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR  GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFQVAILPMNMHKSFRVKEVAERLYDELRAKGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G        ++ K    G++L   +    ++ +A++A
Sbjct: 520 FADMELIGIPHTVVIGDRNLDNNEIEYKYRRSGEKLMISVDEIAAFLQAQIA 571


>gi|239917224|ref|YP_002956782.1| prolyl-tRNA synthetase, family II [Micrococcus luteus NCTC 2665]
 gi|281414302|ref|ZP_06246044.1| prolyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259511606|sp|C5C9S6|SYP_MICLC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239838431|gb|ACS30228.1| prolyl-tRNA synthetase, family II [Micrococcus luteus NCTC 2665]
          Length = 608

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 1/99 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +       D L+  +     L   G+   +      + G + K
Sbjct: 497 DDKGLAWPRAVAPADVHVVVATKGEDGLAAAETLAASLEAEGLTVLVDDRPKVSPGVKFK 556

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            A+    P  ++ G    + G L++KD A G+     + 
Sbjct: 557 DAELIGVPTTVVIG-RGLADGELELKDRATGEARPVPVD 594



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++  ++   +R   +  G   +  P L   +         D    G+F L
Sbjct: 40  GIYSWLPLGLKVLAKVERIVREEMDAIGAQEVHFPALLPREPYEA-TGRWDEYGDGLFRL 98

Query: 74  QDDDGQWISLRY 85
           QD  G    L  
Sbjct: 99  QDRRGNDYLLAP 110


>gi|313902061|ref|ZP_07835474.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467670|gb|EFR63171.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 638

 Score = 65.2 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +   + LR AG+R E+     +  G +++ A     P  +
Sbjct: 534 WLAPVQVRVLPVSDRHHDYARRVEERLRAAGLRVEVD-ARDEKLGYKIRQAQVEKVPYML 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G  E   G + ++   +G   S+ +++       +VAQ 
Sbjct: 593 VVGDREAQEGQVAVRSRDRGDLGSQSLEDFVRLITEKVAQR 633



 Score = 42.5 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 22/73 (30%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   +   +    R +   YG+  + TP +   D   +     +     +F L + +
Sbjct: 265 WHPKGATVYGLLEQFSRELQARYGYQEVRTPEILKVDLWHRS-GHWEHYRDNMF-LIERE 322

Query: 78  GQWISLRYDLTAP 90
                ++      
Sbjct: 323 DALFGVKPMNCPG 335


>gi|260889649|ref|ZP_05900912.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Leptotrichia hofstadii F0254]
 gi|260860255|gb|EEX74755.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Leptotrichia hofstadii F0254]
          Length = 377

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 97/236 (41%), Gaps = 10/236 (4%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           +  ++ +L +IR +Y++YG+  I  P  E  D    +  ++D  ++ V ++   +G+ ++
Sbjct: 8   MSKKDLVLLNIRKMYDSYGYKKISLPSFEEYDL---YNENKDFIDRNVLTVMSPNGKLLA 64

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           LR D+T  +A+ V+                  ++   +   ++  + + +   +    + 
Sbjct: 65  LRPDITLSVAKKVS-------KDQSLKYSKIYYQENTYNLTKYVGYEEDEQLGIELIGKE 117

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
           +      ++   ++++ I      I +++ + +  I +   L  + K      + R    
Sbjct: 118 STFLDFEIINLAVKSLDIINKKSMIVLSHARFISSIFQNFDLEYEIKEQILDCINRKNSH 177

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
             +  L+  + +    +           NL + + +++   ++ + +K + EL +L
Sbjct: 178 DIQKILKRNEHISENVKKLIYKIPELSGNLENIEKELLKYKINGNTKKILSELKQL 233


>gi|224129118|ref|XP_002320505.1| predicted protein [Populus trichocarpa]
 gi|222861278|gb|EEE98820.1| predicted protein [Populus trichocarpa]
          Length = 322

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 2/102 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L   +     L+  GIRAE+     +     ++ A+++  PL  
Sbjct: 221 WLSPVQVRILPVTDTQLEYCKEVISKLKGNGIRAEV--CQGERLPKLIRNAEKQKIPLMA 278

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     + I+    G+  + EI +  S  ++ + + T
Sbjct: 279 VVGPKEAETQTVTIRSRFSGEVGTIEIDDFISRIKSAIERRT 320


>gi|183221772|ref|YP_001839768.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911846|ref|YP_001963401.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776522|gb|ABZ94823.1| Threonine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780194|gb|ABZ98492.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase; ThrRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 638

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 3/109 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K   + N +   IR      G+  I+TP +  + SL K     D   + ++  
Sbjct: 267 GFPFWHPKGTVLWNTLASYIREECFRRGYQEIKTPAI-LNSSLWKKSGHWDNFKENMY-F 324

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
            D D    +++             +  +    P R   +G V R+E  G
Sbjct: 325 TDIDESEFAVKPMNCPGCCLIYKYHMHSYRELPLRFMELGNVHRHEMSG 373



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/295 (11%), Positives = 90/295 (30%), Gaps = 8/295 (2%)

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
                   ++ K  +H   +L  R + L  + + +  G+      +     D++  +   
Sbjct: 336 PMNCPGCCLIYKYHMHSYRELPLRFMELGNVHRHEMSGVLHGLFRVRAFTQDDAHIYAPL 395

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
             + SE  DI+     +  +    E    +       +G +E   ++            I
Sbjct: 396 DKVESEVEDIIDFTFDVYKKFGFTEFKTFIATRPEKSQGSDEDWNLATQALHDALKKKGI 455

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV---SRFKGQNV 346
           +       G  Y     +        + +     +  S+      D       +     +
Sbjct: 456 EYGIKEGDGAFYGPKIEFNIKDSLGRLWQCGTVQIDFSMPNRFELDFTASDGKKHAPVMI 515

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               +      + + ++  E           + + T+          +   Q L   G R
Sbjct: 516 HRAIYGSLERFIGILIEHFEGKFPLWLNPTQIRVLTVA--ETHSDYAKEVYQDLVMQGFR 573

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            E+ +  ++  G++++ +  +     +I G  E+  G +  + +  G+E +  + 
Sbjct: 574 VELDV-RNEKIGSKIRDSIMKRSSYTLILGDKEKEAGSISYRRM--GEETTATVS 625


>gi|283455556|ref|YP_003360120.1| proS Prolyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283102190|gb|ADB09296.1| proS Prolyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 605

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 34/110 (30%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +   +     V +     D+ +    +     L   GI          + G + K
Sbjct: 492 DDKGLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIAELEAKGIEVIFDDRKKVSPGVKFK 551

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    PL  + G    + G ++++D       +  + +       RVA
Sbjct: 552 DAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQVIADRVA 601



 Score = 37.5 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                + + N+I + IR    +     +    L   E  ++  ++    D     +F L+
Sbjct: 40  WLPLGLTVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDN----IFRLK 95

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 96  DRHEADYLLAP 106


>gi|159041076|ref|YP_001540328.1| threonyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|189083601|sp|A8MBZ5|SYT_CALMQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157919911|gb|ABW01338.1| threonyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 613

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 102/334 (30%), Gaps = 17/334 (5%)

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
              +         +D E+ M  A   +   + ++      N    +  I +        +
Sbjct: 268 HAGLFGERMYITESDEELVMRYAACFQQFAMIKDWVLSYRNLPLGMLEIADSYRYEQPGE 327

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                 + R         ++ +K  +  G   ++  F +   +  + +      L    +
Sbjct: 328 TVLCFRLRRFYMPDLHIFVKDLKEAMDVGLRLHAKIFEEIRRIGRDYVS-----LYNVSK 382

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +   +  + +   +A  +G   LV + E  +     +    I   + R  E  T      
Sbjct: 383 EFFDQNKDYLVE-LARREGKPILVRVLEGAKYYWVLNVEYHIIDELKRPREIAT------ 435

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F + N ++  + +   G   +Y   V            F   +       ++     
Sbjct: 436 -FQFDIGNAQRFGIKYRDEGNNIKY--PVIIHTAILGSIERFIFALLDTAAINEANGKVP 492

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + PV +  +   S          + +  AG R E+     +  G +++ A+    
Sbjct: 493 ALPTWITPVQVRVIPVSSGYNEGAIELARRIEEAGFRVEVD-DRDETVGRKIRDAETLWV 551

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           P  ++ G  E   G L ++    G ++S  I+  
Sbjct: 552 PYIVVFGEREAKTGSLSVRVRGVG-QVSMSIEEL 584


>gi|325144523|gb|EGC66822.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325208298|gb|ADZ03750.1| prolyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 599

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 55  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 112

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 113 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 172

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +T    M          +G
Sbjct: 173 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLG 218


>gi|307132338|ref|YP_003884354.1| prolyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306529867|gb|ADM99797.1| prolyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 572

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +    D   +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFVDRGDRPFVLGPTHEEVITDLIRNEISSYKQLPLNFYQIQTK 138



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +   Q LR  G+   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVQEVAEGIYQQLRANGVDVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K   KG++   +  +   +  ++ A
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIVEFLLSQCA 571


>gi|306823404|ref|ZP_07456779.1| proline--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309802595|ref|ZP_07696699.1| proline--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304553111|gb|EFM41023.1| proline--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308220659|gb|EFO76967.1| proline--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 611

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 34/110 (30%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +   +     V +     D+ +    +     L   GI          + G + K
Sbjct: 498 DDKGLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIAELEAKGIEVIFDDRKKVSPGVKFK 557

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    PL  + G    + G ++++D       +  + +       RVA
Sbjct: 558 DAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQVIADRVA 607



 Score = 37.5 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                + + N+I + IR    +     +    L   E  ++  ++    D     +F L+
Sbjct: 46  WLPLGLTVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDN----IFRLK 101

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 102 DRHEADYLLAP 112


>gi|225350874|ref|ZP_03741897.1| hypothetical protein BIFPSEUDO_02448 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158330|gb|EEG71572.1| hypothetical protein BIFPSEUDO_02448 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 611

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 34/110 (30%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +   I     V +     D+ +    +     L   GI          + G + K
Sbjct: 498 DEKGLAWPAIIAPAQVHVVATGKDAAAFEAAEQLIADLEAKGIEVIFDDRKKVSPGVKFK 557

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    PL  + G    + G ++++D       +  + +       RVA
Sbjct: 558 DAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAARVIADRVA 607



 Score = 37.5 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                + + N+I + IR    +     +    L   E  ++  ++    D     +F L+
Sbjct: 46  WLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDN----IFRLK 101

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 102 DRHEADYLLAP 112


>gi|171741061|ref|ZP_02916868.1| hypothetical protein BIFDEN_00127 [Bifidobacterium dentium ATCC
           27678]
 gi|171276675|gb|EDT44336.1| hypothetical protein BIFDEN_00127 [Bifidobacterium dentium ATCC
           27678]
          Length = 611

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 34/110 (30%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +   +     V +     D+ +    +     L   GI          + G + K
Sbjct: 498 DDKGLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIAELEAKGIEVIFDDRKKVSPGVKFK 557

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    PL  + G    + G ++++D       +  + +       RVA
Sbjct: 558 DAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQVIADRVA 607



 Score = 37.5 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                + + N+I + IR    +     +    L   E  ++  ++    D     +F L+
Sbjct: 46  WLPLGLTVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDN----IFRLK 101

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 102 DRHEADYLLAP 112


>gi|161870212|ref|YP_001599382.1| prolyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161595765|gb|ABX73425.1| prolyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 599

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 55  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 112

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 113 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 172

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +T    M          +G
Sbjct: 173 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDSYCRIFTRLG 218


>gi|54401356|gb|AAV34450.1| putative ATP phosphoribosyltransferase regulatory subunit
           [uncultured proteobacterium RedeBAC7D11]
          Length = 319

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 110/307 (35%), Gaps = 30/307 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP G  D    +     ++     N +     + +   L+E+S+ +G    +  R     
Sbjct: 8   LPDGTEDFVGVKAEELEKLRSLFLNFFYKNNCELVVPSLIEFSEIIGGNFNESLRDYA-- 65

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +S  D++ + IS+R D++  +AR   +         +    G   R  K    + +   +
Sbjct: 66  YSFSDENLKNISIRPDISQQIARIDLQQGTKDKK--KYCYFGETLRKTKDSLTKSKIAFK 123

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             V+  G  + T + ++  +M  +L+  G  +    I +   + L  IL+ +GL  ++  
Sbjct: 124 TGVEIFGKISITDEIDLIKLMLLSLKKAG--KYRMTISLGRTEPLSEILKGLGLSLNENR 181

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                               +K ++      +  +F     LT+  +  + + + ++ + 
Sbjct: 182 R-------------------LKKIISSKSKTDLEEFFHSRGLTTRSLIEIKNLMEVNGKI 222

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                 +  K      K F       E + K+   S    +  +   G +Y++G V+   
Sbjct: 223 DCLRYLKKHKN-----KVFQASARKIEKIIKNLPASIDYHLDFSDFPGFDYHSGLVFSVH 277

Query: 311 LGFPVMN 317
           +     +
Sbjct: 278 VLGFGFS 284


>gi|119025474|ref|YP_909319.1| prolyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|152112217|sp|A1A0K4|SYP_BIFAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118765058|dbj|BAF39237.1| prolyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 605

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 34/110 (30%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +   +     V +     D+ +    +     L   GI          + G + K
Sbjct: 492 DEKGLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIGELEAKGIEVIFDDRKKVSPGVKFK 551

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    P+  + G    + G ++++D       +  + +       RVA
Sbjct: 552 DAELIGVPIIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQAIADRVA 601



 Score = 37.5 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                + + N+I + IR    +     +    L   E  ++  ++    D     +F L+
Sbjct: 40  WLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDN----IFRLK 95

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 96  DRHEADYLLAP 106


>gi|238918575|ref|YP_002932089.1| prolyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511594|sp|C5B780|SYP_EDWI9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238868143|gb|ACR67854.1| prolyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 572

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ N++ + +R      G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLNKVENIVREEMNYAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +    D   +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFVDRGDRPFVLGPTHEEVITDLVRNEISSYKQLPLNFYQIQTK 138



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR  GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFQVAILPMNMHKSFRVKEVAERLYDGLRAKGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G +L   +   E++ +A++A
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNNEIEYKYRRSGDKLMISVDEIEAFLQAQIA 571


>gi|325142550|gb|EGC64950.1| prolyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198486|gb|ADY93942.1| prolyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 570

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +T    M          +G
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDSYCRIFTRLG 189


>gi|188588550|ref|YP_001919768.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|238689641|sp|B2UYW3|SYT_CLOBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188498831|gb|ACD51967.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 643

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/275 (9%), Positives = 73/275 (26%), Gaps = 16/275 (5%)

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D       + ++    +G  +      K   +  +       +   + EK +++     K
Sbjct: 384 DGHLIVTPEQLEEEF-KGVLELIQYLMKTLGIDEDISYRFSKWDPNNTEKYINDPEAWNK 442

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                    + L +    V      +          R +      ++   + F +     
Sbjct: 443 TQDTMRTILDHLKI--NYVEADDEAAFYGPKLDLQCRNVHGKEDTLFTVQIDFALAERFD 500

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                         D    + +   +  +        L + ++    +         V +
Sbjct: 501 MSY----------IDKNGEKKRPYIIHRSSIGCYERTLAMLIEKYAGAFPTWLSP--VQV 548

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +          +   + LR  G+R E    + K  G +++ A     P  ++ G  E 
Sbjct: 549 KVLPISDKYNDYAESVVKSLRNKGVRIEADYRAEK-IGYKIREARLERTPYILVVGEKEA 607

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   + ++      E + ++          +A   
Sbjct: 608 ANNEVSVRSRKNDDEGAIKLDAFTERLLNEIATKE 642



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   + +  E  G+   +TPL+  SD   K     D    G+F L
Sbjct: 260 GLPLLMPKGAKIVQTLQRWVEDEEERRGYVLTKTPLMAKSDLY-KISGHWDHYKDGMFVL 318

Query: 74  QD--DDGQWISLRYDLTAPL 91
            D   D +  +LR  +T P 
Sbjct: 319 GDEEKDEEVFALRP-MTCPF 337


>gi|154486903|ref|ZP_02028310.1| hypothetical protein BIFADO_00736 [Bifidobacterium adolescentis
           L2-32]
 gi|154084766|gb|EDN83811.1| hypothetical protein BIFADO_00736 [Bifidobacterium adolescentis
           L2-32]
          Length = 611

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 34/110 (30%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +   +     V +     D+ +    +     L   GI          + G + K
Sbjct: 498 DEKGLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIGELEAKGIEVIFDDRKKVSPGVKFK 557

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    P+  + G    + G ++++D       +  + +       RVA
Sbjct: 558 DAELIGVPIIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQAIADRVA 607



 Score = 37.5 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                + + N+I + IR    +     +    L   E  ++  ++    D     +F L+
Sbjct: 46  WLPLGLNVLNKIENIIREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDN----IFRLK 101

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 102 DRHEADYLLAP 112


>gi|239947222|ref|ZP_04698975.1| prolyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241068545|ref|XP_002408465.1| tRNA synthetases class II, putative [Ixodes scapularis]
 gi|215492453|gb|EEC02094.1| tRNA synthetases class II, putative [Ixodes scapularis]
 gi|239921498|gb|EER21522.1| prolyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 426

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/460 (9%), Positives = 119/460 (25%), Gaps = 67/460 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I + +R      G   +  P ++ +    +     D  
Sbjct: 31  MIRQQAAGIYTWLPLGLKLLKNIENIVRLNMNKAGALEVLMPCIQPAHLWMES-GRFDNY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +   QD        R+D T                                    F 
Sbjct: 90  GKEMLKFQD--------RHDNT----------------------------------LLFG 107

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              +  + ++      +  ++   +         +       +  R+ L        ++ 
Sbjct: 108 PTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINE 167

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++ +     + +A        +   + L        + +   G NL+ E        ++ 
Sbjct: 168 ENAVKTYNQMYQAY-------INTFRDLGVFAIPVIADNGPIGGNLSHE-----FHIIAE 215

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             E +++            +    E+        +    +        I        G +
Sbjct: 216 TGESTIYYDKRFKTLKDNSDIDVEEIKSWYAAAEEKHDVNKLPISEQEITSSKGIEVGHI 275

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +            +  V   ++       G ++  +  +       +  + +        
Sbjct: 276 FYI--------GSKYSVNMNALINDEH--GKLTPVEMSSYGIGISRLVAAIIEANCDEKG 325

Query: 367 SSTNNIKEMGPVLITTMDH-DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               +      V +  ++  DS  +       + L    I        ++  G++    D
Sbjct: 326 IIWPSSVAPFKVSLINLNIHDSKCVELAAKAYKELSAQNIEVLYDDTEARA-GSKFATHD 384

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
               P  II G  + +  ++++K+   G     EI +  S
Sbjct: 385 LIGSPYQIIIGPKKAADNIVELKNRKSGVIEDIEIGSLMS 424


>gi|262037473|ref|ZP_06010933.1| proline--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748508|gb|EEY35887.1| proline--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 576

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 49/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L RG         ++  +I + +R          I  P+L+ + SL +        
Sbjct: 37  MIKQLTRGVYSYLPLGYKVLRKIENIVREEMNRANAQEIHMPVLQPA-SLWEESGRWFAY 95

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D + +  +L     ++   + R +  ++  +      Y+I   FR+E     
Sbjct: 96  GPELMRLKDRNEREFALGPTHEEVVTDIVRNMVSSYKDLP--FNLYQIQTKFRDEMRPRF 153

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 154 GLMRGREFLMKDAYSFH 170



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 22/126 (17%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYAD 425
               NI      +I     D    S  +   + L   GI   +   + +  F    K AD
Sbjct: 472 IWPKNIAPYLVDVIIANIKDEAQFSLGEKLYKELCDNGIETVLDDRNERAGFK--FKDAD 529

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
               PL I+ G G  + G ++IKD   G+                     +   E+   V
Sbjct: 530 LIGIPLKIVVGKG-AAEGKVEIKDRRTGE------------------SREVKAEEVTDFV 570

Query: 486 KKILQE 491
           ++ ++E
Sbjct: 571 RRFIEE 576


>gi|89070126|ref|ZP_01157455.1| prolyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044243|gb|EAR50389.1| prolyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 466

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/461 (9%), Positives = 116/461 (25%), Gaps = 61/461 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  +I   +    +  G  P+  P L+ ++ L +     D  
Sbjct: 31  MIKQAGAGIYSWLPLGYRVLKKIERIVHEEQQRAGHHPVLMPTLQTAE-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GPEMLRIRDRHDRDMLYGPTNEEMITDIFRSHVASYKDLP--LTLYHIQWKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFLM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A     ++      
Sbjct: 180 SYLRTYERMGLQAI------------PMRADSGPIGGDDTHEFLVLAETGESEVFYDSEI 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
             +   +   +  +  +      +  +      E   ++ +     +      RG+E   
Sbjct: 228 TDLRFGEREIDYDDRAQCEAVMAEFTSRYARTDETHDEALFAEVP-EARRRSARGIEVGQ 286

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +      P+    Q P            DG        +       +  + +     
Sbjct: 287 IFYFGTKYSEPMGATVQGP------------DGKPVPVHMGSHGIGVSRLVGALIEANHD 334

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                         V +  +   D D+ +  Q     L   G+   ++    +  G +  
Sbjct: 335 DKGIVWPEGVTPFHVGLVNLKTGDGDADAACQKIYDQLTACGLEV-LYDDRDERAGAKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             D    P  +  G      G++++     G          
Sbjct: 394 TMDLIGLPWRVTVGPRGLKNGVVELTSRRTGDSEEIAPDAL 434


>gi|257462679|ref|ZP_05627088.1| prolyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 593

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 12/164 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   ++ + IR   +  G   +  P+L+ ++ L +     +  
Sbjct: 55  MIKKLASGLYTYLPLGFRTLKKVENIIREEMDRAGSQELLMPVLQPAE-LWRESGRWNVM 113

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
            + +  L+D   +   L     ++   + R    ++ ++      Y I    R+E+    
Sbjct: 114 GEEMVRLKDRHQRDFVLGPTNEEVITDIVRNDISSYKSLP--INLYHIQTKVRDERRPRF 171

Query: 120 --HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  F             S +     M        E  G+K
Sbjct: 172 GLMRSREFIMKDAYSFHTSQESLDEEFENMKNTYTRIFERCGLK 215



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 39/128 (30%), Gaps = 23/128 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
                          V +   +  +++ +   +   + L    + A +        F   
Sbjct: 483 DENGIIWPTALAPYLVDVIPANIKNTEQMKLAEEIYENLNKEHLDAMIDDRDERPGFK-- 540

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            K AD    P  II G    +  ++++K    G+                   + +   E
Sbjct: 541 FKDADLIGFPFKIICGKK-AAENIVELKIRKTGE------------------TLEVSADE 581

Query: 481 LVSTVKKI 488
           ++ T+K++
Sbjct: 582 VIPTIKEL 589


>gi|163840754|ref|YP_001625159.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162954230|gb|ABY23745.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 700

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 5/117 (4%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +  +  V I   +  +D ++        LR+AG+ AE+ + S + F  +++ A 
Sbjct: 581 GAFPAWLAPVQVVGIPVAETFNDYMAD---VVGQLRSAGVLAELDISSDR-FPKKIRTAS 636

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           +   P  +I G  +   G +  +    G + +         R  R  Q  +  SEL+
Sbjct: 637 KEKIPFVLIAGGDDVEAGAVSFR-FRDGSQDNGVPVAEAVQRIVRAVQDRVKDSELI 692


>gi|219669716|ref|YP_002460151.1| prolyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|254782897|sp|B8FR28|SYP_DESHD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219539976|gb|ACL21715.1| prolyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 575

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 41/153 (26%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  +I   +R   +  G   +  P+++ ++ L +     D   + +  L
Sbjct: 38  GIYTYLPLGLRVLRKIEQIVREEMDAKGGQEVLLPIIQPAE-LWRESGRWDLYGQELMRL 96

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            D   +   L         DL     R   +    +      YR     R        F 
Sbjct: 97  NDRHNREFCLGPTHEEIITDLIRGEIRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D   +    +  +M           G
Sbjct: 157 MKDLYSFDRDEAGLAESYKKMYDAYTRIFTRCG 189



 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 7/136 (5%)

Query: 344 QNVPATGFSIGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
                  + IG+SR + A     +          I     +++     D       +   
Sbjct: 436 HPCVMGCYGIGVSRTMAAAIEQNNDKDGIIWPIPIAPYHVIVVPVNMKDDQVRETGEALY 495

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           Q L   G+ A +     +  G + K AD    PL +  G+   + G ++++D   G+   
Sbjct: 496 QELLKLGVEAVLDDRDER-PGVKFKDADLVGYPLRVTVGSKTLANGEVELRDRKTGEVQL 554

Query: 458 REIKNNESWREARVAQ 473
            +++      +  + +
Sbjct: 555 VKVEELAGRIQGMIRE 570


>gi|119946895|ref|YP_944575.1| prolyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|152112944|sp|A1SZR1|SYP_PSYIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119865499|gb|ABM04976.1| prolyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 571

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   E  G   +  P+++ +D   +     D+ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVETIVREEMERAGGVEVLMPIVQPADLWLE-TGRWDQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +  ++D   +   L     ++   L R    ++  +          +R     R   
Sbjct: 90  GGELLRIKDRHTRDFVLGPTHEEVITELVRKEVNSYKQLPLNLFQIQTKFRDETRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F            +  E    +M        + +G
Sbjct: 150 MRAREFTMKDAYSFHMDQACLEKTYQKMFDAYCRIFDRLG 189



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 21/127 (16%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
               NN      V+I  M+           + Y   L+ AGI         +  G     
Sbjct: 464 GIIWNNTLAPFSVVIVPMNMHKSHRVAELAEKYYAELQAAGIEVLFDDRKER-PGIMFAD 522

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           A+    P  ++ G      G+++ KD   G                   +  + I E+++
Sbjct: 523 AELMGIPHTLVIGDRSLDNGVIEYKDRLSG------------------VKQEVAIDEVIN 564

Query: 484 TVKKILQ 490
            +K  L 
Sbjct: 565 FIKAQLA 571


>gi|261405336|ref|YP_003241577.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281799|gb|ACX63770.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 575

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 44/137 (32%), Gaps = 6/137 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  +I   IR   +  G   +  P ++ ++ L K     D     
Sbjct: 34  QTAAGIYSYLPLGWRVLRKIETIIRQEMDAAGGQELLMPAVQPAE-LWKESGRYDVYGAE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L D   +   L     ++   + R    ++  +      Y+I   +R+E+       
Sbjct: 93  LIRLYDRHDREFVLGPTHEEVITSIVRQEISSYRKLP--VNLYQIQSKYRDERRPRFGLL 150

Query: 127 QFIQCDVDNVGSSAETA 143
           +  +  + +  S     
Sbjct: 151 RGREFLMKDAYSFDRDW 167



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 40/149 (26%), Gaps = 9/149 (6%)

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL--- 362
              A L F    E       G+          +     +     G        ++A    
Sbjct: 401 RCGAPLQFHRGIELGHVFKLGTKYSDAMNGKYLDADGREKPLIMGCYGIGVSRVMAAIAE 460

Query: 363 ----KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                       ++      +I     D   +   +   + L  AG+   +     +  G
Sbjct: 461 QRISDERLVWPMSVAPFRVHIIPVAVKDETQMQLAEHIYRELSGAGLEPLLDDRDERA-G 519

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQI 447
            + K AD    PL II G    + G ++ 
Sbjct: 520 VKFKDADLAGAPLRIIVG-RGAASGEVEW 547


>gi|302342678|ref|YP_003807207.1| prolyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301639291|gb|ADK84613.1| prolyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 571

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 45/157 (28%), Gaps = 8/157 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++   +R      G   +  P ++ ++ L +     D   + +   
Sbjct: 38  GIYTWLPMGLRVLRKVEAIVRQEMNAAGAQELLMPGVQPAE-LWRESGRWDFYGRELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRFR 126
            D       L     ++   LAR   +++  +          +R     R        F 
Sbjct: 97  VDRHDNEYCLAPTHEEVITDLARREIQSYRDMPLNLYQIQTKFRDEIRPRFGVMRAREFL 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
                  D    +A  +   M        + +G++  
Sbjct: 157 MKDAYSFDASEDAAAQSYQIMRQAYMRIFDRLGLRYG 193



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 1/86 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +  M  +  ++   Q     L   G+   +     +  G + K
Sbjct: 456 DEAGIVFPLAIAPVSVAVLPMRAEGPAMEAAQRLHDELWALGVDCLLDDRDIR-PGVKFK 514

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIK 448
            +D    PL ++ G      G +++K
Sbjct: 515 DSDLLGVPLRVVVGPKGLETGEVELK 540


>gi|209523462|ref|ZP_03272017.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496204|gb|EDZ96504.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 622

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          Q   Q LR   IRAE+   + +  G Q++ ++    P+ +
Sbjct: 519 WLAPVQVRVLAVSDRFRDYAQSIAQSLRQQNIRAEVD-NTGERLGKQIRNSELEKIPVTV 577

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     L ++  + G   +  +          +A+ +
Sbjct: 578 VIGQRELDNQSLSVRTRSSGDLGTMTLPQLTEEILKAIAEKS 619



 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 2/109 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R  I D  R  +   G++ + +P +   + L K     D   + +F  
Sbjct: 244 GLVFWHPKGSRMRLLIEDYWRQAHLQDGYELLYSPHIANLE-LWKTSGHYDFYRENMFDQ 302

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
            + + Q   L+             +  +    P R   +G V+R E+ G
Sbjct: 303 IEIENQSYQLKPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYERSG 351


>gi|149201162|ref|ZP_01878137.1| histidyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149145495|gb|EDM33521.1| histidyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 361

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 101/335 (30%), Gaps = 48/335 (14%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVA 96
           +E  G  P+ET +L+ ++ L     ++ R    V S      Q   LR D T P+ +   
Sbjct: 18  FEAAGALPVETSVLQPAEVLLDLYGEDIRARAYVTSDALRGEQM--LRPDFTVPVVQMHM 75

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA-EMCMMMADTL 155
           E+      P R    G VFR ++    R  ++ Q   +    +A  A   E+  M  D L
Sbjct: 76  EHGAE---PARYTYSGEVFRRQEEDAQRANEYTQVGFEIFERAAPEAADAEVFAMFFDIL 132

Query: 156 EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL------- 208
             +G+          +  IL   +E +      K   R  + R                 
Sbjct: 133 RPLGL-----RAATGDIGILMAAVEGLRTTERRKAALRRHIWRPRRFRALIDRFSGRAVV 187

Query: 209 -QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF----------------------LS 245
            +    LL         +   G     E    + +                       + 
Sbjct: 188 PEARAALLAMADPMAGAEPLIGLRGPDEIAGRITALREDAEAGPISTSEVQLLDAILAVR 247

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              + ++  L ++     A     + L      + + G +  ++   ++  R        
Sbjct: 248 ETSDNALERLRDIAVDMPAIHGAVDRLARRLSAMSERGLDITKLDFEASYGR-------T 300

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
             E   GF      +       +  GGRYD L  +
Sbjct: 301 QMEYYDGFVFGFYAESRPDLPPIATGGRYDALTRQ 335


>gi|150400144|ref|YP_001323911.1| threonyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166225461|sp|A6US27|SYT_METVS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150012847|gb|ABR55299.1| threonyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 622

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/235 (10%), Positives = 63/235 (26%), Gaps = 20/235 (8%)

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
               E+       +++  +        ++I                    G P+ N   +
Sbjct: 382 NEFFEENKEWFFKMAKEYKLKYGKDAILEILPGRKHYWVGKVDMAVVDSFGRPIENPTVQ 441

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS------LESSTNNIKEM 375
             V  +   G              +  +        L   L++       +        +
Sbjct: 442 IDVESAQRFGITVHDGDKTIHPIILHCSPTGSIERVLCGLLENAYIKTLEDKPPALPTWL 501

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
            P+    +     +          LR +GIR +       + G +++ A        ++ 
Sbjct: 502 TPIQARVIPVSERNEEFALEVVNKLRESGIRTDFDDRED-SMGKKIRNAGTDWVNYVVVI 560

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           G  E     L +      +E S +          +  + ++ + EL+  V   ++
Sbjct: 561 GDNEMESKKLTV---TLREESSIK----------QPKKESLTVGELIEKVTSEIK 602


>gi|88607069|ref|YP_505231.1| prolyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|114152168|sp|Q2GK70|SYP_ANAPZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88598132|gb|ABD43602.1| prolyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 426

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/241 (9%), Positives = 67/241 (27%), Gaps = 8/241 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           + ++   G        + +  ++ + IR      GF  I  P ++ +D L K     D  
Sbjct: 31  IVSQTASGIYTLLPLGLMVLRKVENIIREEINAVGFSEILMPTMQPAD-LWKESQRYDSY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            + +  + D  G+ + L     ++   L R   +++  +       +         RN  
Sbjct: 90  GQELIRIHDRGGREMVLGPTHEEVVTDLVRSSLKSYRDLPVNLYQIQWKFRDELRPRNGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D     A      +        + + ++       +          
Sbjct: 150 LRSREFLMMDAYSFDTDFEKAMKTYDAVFRAYRKAFKRMNLQTIALKADMGAIGGSVSHE 209

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +     +           + +++ +G++ +K +       +       A    +    
Sbjct: 210 FHVLTPTGESTVYYDERALELSEMNDYGIEELKEVYAATDDMHDEKSCGIAPEDLKTARG 269

Query: 240 M 240
           +
Sbjct: 270 I 270



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           ++       G +L   D    P  +I G      G+L++K+ A G      + +  S
Sbjct: 366 LYDDRDDTPGVKLSRMDLIGLPWQVIVGNSFIKDGVLELKNRATGDIELLSVDDVVS 422


>gi|325205891|gb|ADZ01344.1| prolyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 570

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +T    M          +G
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLG 189


>gi|325136158|gb|EGC58766.1| prolyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 599

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 55  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 112

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 113 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 172

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +T    M          +G
Sbjct: 173 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLG 218



 Score = 37.9 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 30/130 (23%), Gaps = 21/130 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V+I  M+                 L  AG    +     +  G  
Sbjct: 488 DEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA-GVL 546

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           L  ++    P  I+ G      G +                  E           + I E
Sbjct: 547 LNDSELLGIPHRIVIGDRALKEGNV------------------EYAERRNNEAQAVAIGE 588

Query: 481 LVSTVKKILQ 490
           +V+ V  +L 
Sbjct: 589 IVARVTALLN 598


>gi|187932904|ref|YP_001884583.1| threonyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|238691610|sp|B2TIT5|SYT_CLOBB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187721057|gb|ACD22278.1| threonine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 643

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/275 (9%), Positives = 73/275 (26%), Gaps = 16/275 (5%)

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D       + ++    +G  +      K   +  +       +   + EK +++     K
Sbjct: 384 DGHLIVTPEQLEEEF-KGVLELIQYLMKTLGIDEDISYRFSKWDPNNTEKYINDPEAWNK 442

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                    + L +    V      +          R +      ++   + F +     
Sbjct: 443 TQDTMRTILDHLKI--NYVEADDEAAFYGPKLDLQCRNVHGKEDTLFTVQIDFALAERFD 500

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                         D    + +   +  +        L + ++    +         V +
Sbjct: 501 MSY----------IDKNGEKKRPYIIHRSSIGCYERTLAMLIEKYAGAFPTWLSP--VQV 548

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +          +   + LR  G+R E    + K  G +++ A     P  ++ G  E 
Sbjct: 549 KVLPISDKYNDYAESVVKSLRNKGVRIEADYRAEK-IGYKIREARLERTPYILVVGEKEA 607

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   + ++      E + ++          +A   
Sbjct: 608 ANNEVSVRSRKNDDEGAIKLDAFTERLLNEIATKE 642



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   + +  E  G+   +TPL+  SD   K     D    G+F L
Sbjct: 260 GLPLLMPKGAKIVQTLQRWVEDEEERRGYVLTKTPLMAKSDLY-KISGHWDHYKDGMFVL 318

Query: 74  QD--DDGQWISLRYDLTAPL 91
            D   D +  +LR  +T P 
Sbjct: 319 GDEEKDEEVFALRP-MTCPF 337


>gi|254673039|emb|CBA07634.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 599

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 55  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 112

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 113 GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 172

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +T    M          +G
Sbjct: 173 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLG 218


>gi|196230369|ref|ZP_03129231.1| threonyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196225299|gb|EDY19807.1| threonyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 692

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/453 (9%), Positives = 115/453 (25%), Gaps = 28/453 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +    +      G+D + TP+L   +             + +F  
Sbjct: 222 GLPLWLPRGTVLIEELEKLAKETEFAGGYDRVRTPVLARENMYLTS-GHLPYYAESMFP- 279

Query: 74  QDDDGQWISLRYD--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
                  + LR D   +     +  +                  +             + 
Sbjct: 280 ------PMELREDAKGSEGFIDFTLKRLSFDESEEYLREAYRKAKGTHTSGSYVDMEAEF 333

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG--------ILEKIG 183
           +        +       + +      +GI      I   +R  L          +   + 
Sbjct: 334 EEFFRAIPEQQFGDASKIALERLFLDMGIDEAKSKIAPPDRYYLKAMNCPHHHKLFAAVP 393

Query: 184 LHGDD---KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
               D   +L E     R     + FGL  V+ +          +    +   +   ++ 
Sbjct: 394 RSYRDLPLRLAEYGTCYRYEQSGELFGLMRVRSMQMNDAHIYCTEEQFESEFRA-VNEMY 452

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + + +I         +        G+K  +   +  +          R  I+   V    
Sbjct: 453 LKYFAIFGIDKYVMRFSTHDPAKLGQKFVDNSELWLKTEDMVRGVLQRTGINFIEVPNEA 512

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-----DGLVSRFKGQNVPATGFSIGI 355
            + G   +  +   +  E              R+     D   +      +         
Sbjct: 513 AFYGPKIDVQVWSAIGREFTIATNQVDFAVPARFGLTYKDRDNTSKTPLCIHRAPLGTHE 572

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             +   ++    +         V +  +  +   ++  +     LR AG+RA +   S  
Sbjct: 573 RFVGFLIEHYAGNFPLWLSPEQVRVLPIGDEEPLVNYAKAIQAELRAAGVRANLDSSSDP 632

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               ++  A++      ++ G  +   G + ++
Sbjct: 633 -IKAKIASAEQMKVHTMLVLGHRDLEAGNVSVR 664


>gi|11498158|ref|NP_069384.1| threonyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3334363|sp|O29703|SYT_ARCFU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2650076|gb|AAB90685.1| threonyl-tRNA synthetase (thrS) [Archaeoglobus fulgidus DSM 4304]
          Length = 619

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/273 (9%), Positives = 65/273 (23%), Gaps = 22/273 (8%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           +       +F     L+ E +  +     ++ E     +           +  + LV I 
Sbjct: 344 KDMEQAKEEFFNQYRLSVEVLREI----GLEPEDYEVAVRITKDFYEENREFVHSLVDIL 399

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
           +         +R                    A+    +  E  +      V   G+   
Sbjct: 400 KKPILIEMWDHRFFYFVLKFEFNFVDALDKASALSTVQIDVENAERYGITFVDSDGKEKH 459

Query: 337 LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
                   +         +      +            + P  +  +      +      
Sbjct: 460 PYILHCSVSGAVERVMYALLEKAKFMLDEGRLPMLPVWLSPTQVRVIPVSERFVDAAIKI 519

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM--LQIKDLAKGK 454
              +   GIR ++    ++  G +++ A     P   + G  E   G   + ++      
Sbjct: 520 ADDIARNGIRVDVD-DRNETLGKKIRDAQTEWIPYIAVVGEKEIESGKLAVTVR------ 572

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVKK 487
                        +    ++ +   EL   V+ 
Sbjct: 573 ---------AESTQKEQKRVEMSAEELAERVRS 596


>gi|289193291|ref|YP_003459232.1| glycyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939741|gb|ADC70496.1| glycyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 577

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 20/113 (17%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  + +  D     +   +MLR  GI AE     S   G +   AD    P  I     
Sbjct: 485 YVLPLVNKEDMPKIAKEIEKMLRENGIIAE--YDDSGAIGRRYMRADEIGVPFCITVDGQ 542

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                 + +++    +++                   + I ELV  +K+ L++
Sbjct: 543 TLKDKTVTVRERNTREQV------------------RVKIDELVDYLKEKLKD 577



 Score = 41.0 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++N I+   R  Y    GF  IE+P +   + L    
Sbjct: 31 GFVDYGPLGCLLKNNIISKFREQYIVKEGFYEIESPTVTPYEVLKASG 78


>gi|325972697|ref|YP_004248888.1| threonyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027935|gb|ADY14694.1| threonyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 581

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +    +     +   + LR  G R    LG  +    +++ A +   P  +I G  
Sbjct: 484 QIKLIPVGENFFDYAKDLEKRLRKEGFRVSADLGDDR-MNAKIRNAQQLKIPYMVIIGER 542

Query: 439 ERSRGMLQIKDLAKGKEL 456
           E     + ++ L  GK+ 
Sbjct: 543 EAQNDQVSVR-LRTGKQE 559


>gi|300715419|ref|YP_003740222.1| Prolyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061255|emb|CAX58364.1| Prolyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 572

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGDRPFVLGP 108



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K   +     LR  GI   +     +  G  
Sbjct: 461 DERGIIWPAALAPFQVAILPMNMHKSFRVKELAEELYAQLRAKGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K   +G++   +      +  + + 
Sbjct: 520 FADMELIGVPHTIVIGDRNLDSEEVEYKSRREGEKRMIKTGEILDFLVSEIN 571


>gi|330839271|ref|YP_004413851.1| Prolyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329747035|gb|AEC00392.1| Prolyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 568

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 77/249 (30%), Gaps = 11/249 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I   IR   +  G   +  P+++ ++   +         + +F L
Sbjct: 38  GVYTYLPLAWRTIKKIEQIIREEMDAAGGQELCMPIMQPAEIWQES-GRWSVFGQEMFRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D  G+   L     ++   L R    ++  +      Y+I   +R+E        +  +
Sbjct: 97  KDCHGREFCLGPTHEEMITTLVRDEVRSYKQLP--LLLYQIQNKYRDEIRPRFGLMRSRE 154

Query: 131 C---DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
               D+ +       AD     M              +     +   + G          
Sbjct: 155 FIMKDLYSFDKDEAGADISYKKMYDAYTNVFTRCGLKFRPVEADAGAIGGNHTHEFTVLA 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                 +    A D      ++  +LL  +   + +    K      + I+++  FL + 
Sbjct: 215 AAGESEIACCTACDYAAN--VEKAELLPIDASEEEAQPLKKVETPACKTIELVADFLRVP 272

Query: 248 LEKSMHELY 256
           LE+++  + 
Sbjct: 273 LERTIKAVA 281



 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 1/88 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++      S+ L+  +   +ML  AG+ A +     +  G + K AD 
Sbjct: 462 IWPRAIAPYEVVVVPVNAKASEQLALAEEVYEMLLAAGVDAILDDRKDRA-GVKFKDADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              PL I  G      G +++K    G+
Sbjct: 521 IGYPLRITIGPKALEEGKIELKVRRSGE 548


>gi|297620157|ref|YP_003708262.1| threonyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379134|gb|ADI37289.1| threonyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 629

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 42/123 (34%), Gaps = 14/123 (11%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            E        + P+ +  +              + LR  GIRA+ +    ++ G +++ A
Sbjct: 498 EEVPPMLPTWLAPIQVRVIPVSDKHQEYALSVAEKLRANGIRAD-YDDREESIGKKIRNA 556

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
            +      ++ G  E  +G L +                      +  +  + + EL+ST
Sbjct: 557 GKDWSMYVVVIGDEEMEKGNLNV-------------TVRAKSSTKKPVKEVMKLEELIST 603

Query: 485 VKK 487
           +K 
Sbjct: 604 IKS 606



 Score = 38.7 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDD 76
              K   IR+ + D + ++   YG  P+ETP++   D   K + +  D+  +  +  +  
Sbjct: 230 WYPKGKLIRDLLSDYVYDLVVKYGAMPVETPVM--YDLGNKAIKEHADKFGERQYRFR-Q 286

Query: 77  DGQWISLRY 85
             + + LR+
Sbjct: 287 SNKDLMLRF 295


>gi|261392382|emb|CAX49924.1| prolyl-tRNA synthetase (proline--tRNA ligase; ProRS; global RNA
           synthesis factor) [Neisseria meningitidis 8013]
          Length = 570

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +T    M          +G
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLG 189


>gi|271501814|ref|YP_003334840.1| prolyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270345369|gb|ACZ78134.1| prolyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 572

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +    D   +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFVDRGDRPFVLGPTHEEVITDLIRNEISSYKQLPLNFYQIQTK 138



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +   Q LR  GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVQEVAEGIYQQLRANGIDVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K   KG++   +  +   +  ++ A
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIVEFLLSQCA 571


>gi|237807601|ref|YP_002892041.1| prolyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511628|sp|C4LBX6|SYP_TOLAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|237499862|gb|ACQ92455.1| prolyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 574

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 49/139 (35%), Gaps = 6/139 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ +++   +R      G   +  P+++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLHKVEAIVREEMNKAGAIEVSMPVVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   L RY   ++  +      Y+I   FR+E     
Sbjct: 90  GPELCRLTDRHNRPFVLGPTHEEVVTALVRYEVNSYKQLP--LNLYQIQTKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAET 142
              +  +  + +  S    
Sbjct: 148 GVMRGREFTMKDAYSFHMN 166



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 23/132 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSK-NFGN 419
                   +      V+I  M+           + +   L+ AG   E+ L   K   G 
Sbjct: 463 DDRGIIWTDSIAPFQVVIIPMNMHKSERVQELAERFYNELQAAG--VEVLLDDRKERPGV 520

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
                +    P +I+ G      G+++ K    G +                    + I 
Sbjct: 521 MFADMELIGIPHSIVIGDRSIDNGVVEYKYRRSGDKT------------------EVAID 562

Query: 480 ELVSTVKKILQE 491
           E+++ +K  L +
Sbjct: 563 EIIAKIKAQLNK 574


>gi|89895282|ref|YP_518769.1| hypothetical protein DSY2536 [Desulfitobacterium hafniense Y51]
 gi|114152191|sp|Q24UG7|SYP_DESHY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89334730|dbj|BAE84325.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 575

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 41/153 (26%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  +I   +R   +  G   +  P+++ ++ L +     D   + +  L
Sbjct: 38  GIYTYLPLGLRVLRKIEQIVREEMDAKGGQEVLLPIIQPAE-LWRESGRWDLYGQELMRL 96

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            D   +   L         DL     R   +    +      YR     R        F 
Sbjct: 97  NDRHNREFCLGPTHEEIITDLIRGEIRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D   +    +  +M           G
Sbjct: 157 MKDLYSFDRDEAGLAESYKKMYDAYTRIFTRCG 189



 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 7/136 (5%)

Query: 344 QNVPATGFSIGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
                  + IG+SR + A     +          I     +++     D       +   
Sbjct: 436 HPCVMGCYGIGVSRTMAAAIEQNNDKDGIIWPIPIAPYHVIVVPVNMKDDQVRETGEALY 495

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           Q L   G+ A +     +  G + K AD    PL +  G+   + G ++++D   G+   
Sbjct: 496 QELLKLGVEAVLDDRDER-PGVKFKDADLVGYPLRVTVGSKTLANGEVELRDRKTGEVQL 554

Query: 458 REIKNNESWREARVAQ 473
            +++      +  + +
Sbjct: 555 VKVEELAGRIQGMIRE 570


>gi|260886940|ref|ZP_05898203.1| proline--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260863002|gb|EEX77502.1| proline--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 543

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 77/249 (30%), Gaps = 11/249 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I   IR   +  G   +  P+++ ++   +         + +F L
Sbjct: 13  GVYTYLPLAWRTIKKIEQIIREEMDAAGGQELCMPIMQPAEIWQES-GRWSVFGQEMFRL 71

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D  G+   L     ++   L R    ++  +      Y+I   +R+E        +  +
Sbjct: 72  KDCHGREFCLGPTHEEMITTLVRDEVRSYKQLP--LLLYQIQNKYRDEIRPRFGLMRSRE 129

Query: 131 C---DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
               D+ +       AD     M              +     +   + G          
Sbjct: 130 FIMKDLYSFDKDEAGADISYKKMYDAYTNVFTRCGLKFRPVEADAGAIGGNHTHEFTVLA 189

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                 +    A D      ++  +LL  +   + +    K      + I+++  FL + 
Sbjct: 190 AAGESEIACCTACDYAAN--VEKAELLPIDASEEEAQPLKKVETPACKTIELVADFLRVP 247

Query: 248 LEKSMHELY 256
           LE+++  + 
Sbjct: 248 LERTIKAVA 256



 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 1/88 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++      S+ L+  +   +ML  AG+ A +     +  G + K AD 
Sbjct: 437 IWPRAIAPYEVVVVPVNAKASEQLALAEEVYEMLLAAGVDAILDDRKDRA-GVKFKDADL 495

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              PL I  G      G +++K    G+
Sbjct: 496 IGYPLRITIGPKALEEGKIELKVRRSGE 523


>gi|257125504|ref|YP_003163618.1| prolyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049443|gb|ACV38627.1| prolyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 570

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 79/251 (31%), Gaps = 6/251 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L RG         R+  +I +  R   +  G   +  P+L+ + SL +        
Sbjct: 31  MINQLTRGVYTYLPFGYRVLKKIENITREEMDRAGAQELLMPVLQPA-SLWEESGRWFAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D + +  SL     ++   + R    ++  + F     +             
Sbjct: 90  GPELMRLKDRNEREFSLGPTHEEVITDVVRDSISSYKELPFNVYQIQTKFRDEMRPRFGL 149

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKI 182
              +             + +  E  + M DT   +  +   +Y     +   + G     
Sbjct: 150 MRGREFVMKDGYSFHLTQESLDEEYLNMKDTYSRIFERMGLNYRAVEADTGSIGGDASHE 209

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +   + ++   + D           + L E   +            ++ I+ + +
Sbjct: 210 FMVLAESGEDDILYSDSSDYAANVEKATSIIELKESNEEKLPKELVETP-NAKTIEDLAN 268

Query: 243 FLSIDLEKSMH 253
           FL+I  EK++ 
Sbjct: 269 FLNIPKEKTVK 279



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 5/113 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ 420
                          V +   +  D   ++  +     L    I   +   + +  F   
Sbjct: 461 DEYGIIWPKAIAPYHVDVIIANMKDETQVNIGEKLYNELNQNKIETVLDDRNERAGFK-- 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            K AD    PL I+ G G  + G++++KD   G+    +++   ++ +  +A+
Sbjct: 519 FKDADLIGFPLKIVVGKG-AADGIVEVKDRKTGESTDVKVEEVLNFVKNFMAE 570


>gi|218259669|ref|ZP_03475318.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224962|gb|EEC97612.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii
           DSM 18315]
          Length = 651

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/462 (10%), Positives = 110/462 (23%), Gaps = 82/462 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  ++R ++ D ++ I + YG+  + TP +                       
Sbjct: 262 GLPLWLPRGTQLRLKLEDFLKRIQKKYGYQQVMTPHI----------------------- 298

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
               G+ +                              G   +  K          + + 
Sbjct: 299 ---GGKQL--------------------------YVTSGHYAKYGKDSFQPIHTPQEGEE 329

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +         E+      + + +             R    G + +    G+     R
Sbjct: 330 FLLKPMNCPHHCEIFKSFPRSYKDL-----------PLRFAEFGTVYRYEQSGELHGLTR 378

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      D         +K    +        F        E    +   ++ D      
Sbjct: 379 VRGFTQDDAHLFCRPDQLKDEFLKVMDIIFIIFKALDFENFEAQISLRDKVNRDKYIGSE 438

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAILG 312
           E +E  +  I        L    E    + Y       +   I R  +  T    +    
Sbjct: 439 ENWEKAESAIIEACQEKGLKAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDYN 495

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
            P   E +              D    R    +    G       + V ++         
Sbjct: 496 LPERFELEYTGE----------DNKKHRPVMIHRAPFGSM--ERFVAVLIEHTGGKFPLW 543

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V I  +              + L    +   +    ++  G +++  + +  P  
Sbjct: 544 LTPDQVSILPIS--EKFNDYAYEVKRQLEAEDLSVLVD-DRNEKIGRKIRDTELKRIPYM 600

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +I G  E     + ++   +G + S +I    +  +  + + 
Sbjct: 601 LIVGEKEAENNEVSVRKQGEGDKGSMKIATFAALLKGEIEEQ 642


>gi|301300332|ref|ZP_07206537.1| threonine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852068|gb|EFK79747.1| threonine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 649

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 83/274 (30%), Gaps = 9/274 (3%)

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
           ++ R        GL  V+ +      D          +  + +  +++ +  D + + + 
Sbjct: 365 MMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEI--KTLIKLMTEVYNDFDITDYR 422

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
                +     EK F++  +  +   K     + + +      G   + G   +      
Sbjct: 423 FRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMGLEYFEAEGEAAFYGPKIDVQTKTA 482

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTN 370
           +  E+    +        R+D       G+         G    + R    L  +     
Sbjct: 483 LGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVSTMERFTAYLTEMYKGAF 542

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                   +      +   +      +  LR  GIR  +    ++  G +++ A     P
Sbjct: 543 PTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVD-DRNEKMGYKIRQAQVNKIP 601

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
             ++ G  E S G + ++    G+E +  +   E
Sbjct: 602 YTLVIGDEEVSNGTVTVR--KYGEEKTNTMTKAE 633



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 52/184 (28%), Gaps = 9/184 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +    +GF  + TP+L       K     D   + +F  
Sbjct: 265 GLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYTPVLANLSLY-KQSGHWDHYREDMFPP 323

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG------PGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK G        R 
Sbjct: 324 MDMGDGEMLELRPMNCPSHIQVYNHHKRSYRELPLRIAELGMMHRYEKSGALTGLSRVRE 383

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          E     +  +M +      I    + +   + K  +   +   + 
Sbjct: 384 MTLNDGHDFIEPDHIEDEIKTLIKLMTEVYNDFDITDYRFRLSYRDPKNTEKYFDDDEMW 443

Query: 186 GDDK 189
              +
Sbjct: 444 EKSQ 447


>gi|32266454|ref|NP_860486.1| ATP phosphoribosyltransferase regulatory subunit [Helicobacter
           hepaticus ATCC 51449]
 gi|46395740|sp|Q7VHL1|HISZ_HELHP RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|32262505|gb|AAP77552.1| hypothetical protein HH_0955 [Helicobacter hepaticus ATCC 51449]
          Length = 280

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 6/118 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  ELP+G         R++  I       +    +  I TP   + +         D  
Sbjct: 3   LEHELPQGSKLYFDMSARLKRDIESCAIKAFYENDYREIVTPSFAFLE------HQGDMF 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           N+ +  L  ++   I LRYD T    R V +         + + I PVF        +
Sbjct: 57  NREIVRLSSENNHQIGLRYDTTLDAMRIVTKRIMRSSTHKKWFYIQPVFSYPTTEIHQ 114


>gi|119358269|ref|YP_912913.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium
           phaeobacteroides DSM 266]
 gi|119355618|gb|ABL66489.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium
           phaeobacteroides DSM 266]
          Length = 675

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M    +  +  +   + L  +GIRAE+ L  ++  G +++ A+    P  I
Sbjct: 572 WLAPVQAIIMPLGEEIHAYAKSIHEKLLHSGIRAELDL-RNEKIGKKIREAEIGKLPYMI 630

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           I G  E   G L ++    G E      +     +  +A  T+
Sbjct: 631 IIGQKELESGQLSLRRHRTGDEGLFTTDSLIDKLKKEIAAKTL 673



 Score = 43.7 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 20/54 (37%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           L  E+  G      K   IRN +   ++      G+ P+ TP +   +   +  
Sbjct: 281 LSPEIGSGLPVWLPKGAIIRNELETFLKEEQRKRGYLPVYTPHIGNIELYKRSG 334


>gi|308389457|gb|ADO31777.1| prolyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325130423|gb|EGC53187.1| prolyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
 gi|325201951|gb|ADY97405.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240149]
          Length = 570

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +T    M          +G
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLG 189



 Score = 37.5 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 30/130 (23%), Gaps = 21/130 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V+I  M+                 L  AG    +     +  G  
Sbjct: 459 DEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLDDRDERA-GVL 517

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           L  ++    P  I+ G      G +                  E           + I E
Sbjct: 518 LNDSELLGIPHRIVIGDRALKEGNV------------------EYAERRNNEAQAVAIGE 559

Query: 481 LVSTVKKILQ 490
           +V+ V  +L 
Sbjct: 560 IVARVTALLN 569


>gi|260596616|ref|YP_003209187.1| prolyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260215793|emb|CBA28231.1| Prolyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 572

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGDRAFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DDRGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYAELRAKGIDVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  ++ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTVVIGDRNLDNDEIEYKYRRDGEKKMIKTGDILDYL 566


>gi|227890560|ref|ZP_04008365.1| threonyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867498|gb|EEJ74919.1| threonyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 649

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 83/274 (30%), Gaps = 9/274 (3%)

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
           ++ R        GL  V+ +      D          +  + +  +++ +  D + + + 
Sbjct: 365 MMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEI--KTLIKLMTEVYNDFDITDYR 422

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
                +     EK F++  +  +   K     + + +      G   + G   +      
Sbjct: 423 FRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMGLEYFEAEGEAAFYGPKIDVQTKTA 482

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTN 370
           +  E+    +        R+D       G+         G    + R    L  +     
Sbjct: 483 LGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVSTMERFTAYLTEMYKGAF 542

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                   +      +   +      +  LR  GIR  +    ++  G +++ A     P
Sbjct: 543 PTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVD-DRNEKMGYKIRQAQVNKIP 601

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
             ++ G  E S G + ++    G+E +  +   E
Sbjct: 602 YTLVIGDEEVSNGTVTVR--KYGEEKTNTMTKAE 633



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 9/184 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +    +GF  + TP+L   +   K     D   + +F  
Sbjct: 265 GLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYTPVLANLNLY-KQSGHWDHYREDMFPP 323

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG------PGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK G        R 
Sbjct: 324 MDMGDGEMLELRPMNCPSHIQVYNHHKRSYRELPLRIAELGMMHRYEKSGALTGLSRVRE 383

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          E     +  +M +      I    + +   + K  +   +   + 
Sbjct: 384 MTLNDGHDFIEPDHIEDEIKTLIKLMTEVYNDFDITDYRFRLSYRDPKNTEKYFDDDEMW 443

Query: 186 GDDK 189
              +
Sbjct: 444 EKSQ 447


>gi|195575302|ref|XP_002105618.1| GD21576 [Drosophila simulans]
 gi|194201545|gb|EDX15121.1| GD21576 [Drosophila simulans]
          Length = 1567

 Score = 64.9 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 66/479 (13%), Positives = 131/479 (27%), Gaps = 48/479 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL    +           N     L    G  + L 
Sbjct: 970  VIEFVKAKVVNLFRKHGAIEVDSPLLSPLSA----RNSTANANANAVHLMTHSGCVVVLP 1025

Query: 85   YDLTAPLARYVAEN--FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N       +            N          F            + 
Sbjct: 1026 CDLRTQFARHVTMNSVNLIRRYCVDRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDA 1085

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   +   L  +  K  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1086 ELLSLAFEITSELPRLREK--NLAIRMNHTNLLRAILIYCNVPKAQYGALFEGTMDFIES 1143

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      +     ++  S        L +  +    S +     KS+          
Sbjct: 1144 RISRFQFHSSITGIMEKSRTSAQTLMDMLLANFLLTGSRSTVDDSALKSLMRGKGEAASL 1203

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G     EL  +  L    G    +  I       + +        +       +  + 
Sbjct: 1204 ARG--ALRELETVVGLAYSLG---VKCPIHIWAGLPISFDRASNGGIVWQMTADLKPNRS 1258

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNV---PATGFSIGISRLIV------ALKSLESSTNNIK 373
                 +  G RYD ++  F+ Q     PA      +S   +       + ++        
Sbjct: 1259 GHPSVLAIGERYDSMLHEFQKQAQKFNPAMPARGVLSGAGLTFSLDKLVAAVGVEYAKDC 1318

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG--NQLKYADRRNCPL 431
                V I         L       ++L + GIR  +   ++   G   Q   A R     
Sbjct: 1319 RAIDVGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIV-EAASELGDEAQ-DLA-RLGALH 1374

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
             I+        G L+++                S+   R  +  +  +ELV  ++K+L+
Sbjct: 1375 VILVAE----NGSLRVR----------------SFERERFQERHLTRTELVEFIQKMLR 1413


>gi|291559712|emb|CBL38512.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [butyrate-producing bacterium SSC/2]
          Length = 641

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L         L+ AGIRA++    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVEVIPISDKHLDYANKVLDTLKAAGIRADID-TRAEKMGYKIREAQLQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E   G + ++   KG E   ++ +  +  +  +A   
Sbjct: 592 VVGGKEEENGAVSVRSRFKGDEGQMKLDDFLAAIKEEIANRE 633



 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +LD  R I++  G+  I TP++  S  L +     D   + +++ 
Sbjct: 260 GFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPIM-LSRHLWETSGHWDHYKENMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q  +++      
Sbjct: 319 VI-DDQDFAIKPMNCPG 334


>gi|283783983|ref|YP_003363848.1| prolyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282947437|emb|CBG86984.1| prolyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 572

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 28/107 (26%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +  S+ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVSFL 566


>gi|255526047|ref|ZP_05392970.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255510233|gb|EET86550.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 638

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 79/262 (30%), Gaps = 7/262 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F    N+T E ++++                EL            +    +  +R
Sbjct: 381 DDAHMFLAKDNITDEIVNVIKLIDDFYKVFGFEYFVELSTRPEDSMGSDEDWEAATNGLR 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           K     + I +   +  G   + G   +  L   +    Q   V        R+D     
Sbjct: 441 K---ALDTIGLKYKVNEGDGAFYGPKIDFHLRDCIGRTWQCGTVQLDFQMPERFDLTYIG 497

Query: 341 FKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             G+            G     + +     +      + PV +  M+   D +       
Sbjct: 498 ADGEKHRPVMVHRVVFGSVERFIGILIEHYAGAFPAWLAPVQVKIMNITDDQIDYANKVA 557

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L+   IR E+ L  ++  G +++ A  +  P  ++ G  E     + ++    G   +
Sbjct: 558 KELKKNKIRVEVDL-RNEKIGYKIREAQLQKVPYMLVLGDKEMKENTVAVRSRKLGDLGA 616

Query: 458 REIKNNESWREARVAQITIPIS 479
             +       +  + +    + 
Sbjct: 617 MALDQFVEKIKGEIDRKESSVD 638



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + +  R ++    +D I TP++  ++ L +     D   + ++  
Sbjct: 261 GFPFFHPKGMIIRNTLQNFWREMHSAADYDEIMTPVI-LNEKLWRQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 TKIDNEDYAIKPMNCPG 335


>gi|257791654|ref|YP_003182260.1| threonyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257475551|gb|ACV55871.1| threonyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 637

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 43/114 (37%), Gaps = 19/114 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +              + L+ AG R E++   ++    ++  A  +  P  +
Sbjct: 540 WLAPVQVAVLPLADRHNEAAAELAKQLKAAGGRIEVY-DQNEPMRVKIAKAQSQKIPYMV 598

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           + G  E   G + +++  +G        +  +W          P+ +LV  +++
Sbjct: 599 VLGDKEIENGTVSVRERHEG--------DLGAW----------PVEQLVEKLRE 634



 Score = 41.7 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 18  CPTKEIRIRNRILDSIR-NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD 76
              K  R+   + + +R ++YE  G++ + TP +  +D   K         + ++    +
Sbjct: 263 YLPKGARVIRTMQEWLRRDLYER-GYEEVITPHVYNADV-WKTSGHYGFYKENMYFFNIN 320

Query: 77  DGQW 80
           +G  
Sbjct: 321 EGTD 324


>gi|324991486|gb|EGC23419.1| threonine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 647

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/400 (11%), Positives = 100/400 (25%), Gaps = 36/400 (9%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++    
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR---- 616

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                         R  +    TIP+ E V  +   +   
Sbjct: 617 --------------RYGQKETHTIPVDEFVEQILADIASK 642



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|194098918|ref|YP_002001983.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|291043544|ref|ZP_06569260.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|293398861|ref|ZP_06643026.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|193934208|gb|ACF30032.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|291012007|gb|EFE03996.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291610275|gb|EFF39385.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 599

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/166 (10%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 55  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 112

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 113 GRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 172

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +     M          +G
Sbjct: 173 RPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDAYCRIFTRLG 218


>gi|194335337|ref|YP_002017131.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693365|sp|B4SB93|SYT_PELPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194307814|gb|ACF42514.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 657

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    D L   +   Q L  AGIRAE+    S+  G +++ A+    P  I
Sbjct: 557 WLAPVQAVVLPIAEDVLDYAKSVHQALLAAGIRAELD-TRSEKIGKKIRDAEVSKIPCMI 615

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E+  G + ++    G E    +       +  +   +
Sbjct: 616 VIGQKEQESGEVSLRRHRIGDEGRFSVSGLIEKLKTEITGKS 657



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 20/54 (37%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           L  E+  G      K   IRN +   ++      G+ P+ TP +   +   +  
Sbjct: 266 LSPEVGSGLPIWLPKGAIIRNELETFLKEEQRKRGYLPVYTPHIGNIELYKRSG 319


>gi|293364941|ref|ZP_06611658.1| threonine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703194|ref|ZP_07640140.1| threonyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316391|gb|EFE56827.1| threonine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623269|gb|EFO02260.1| threonyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 647

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/375 (11%), Positives = 95/375 (25%), Gaps = 22/375 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNES 465
            + +  +  + +   
Sbjct: 619 GQKETQTVSVDDFVQ 633



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|206603805|gb|EDZ40285.1| Prolyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 422

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 39/153 (25%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   ++   IR    + G   +  P L+ SD L +           +F L
Sbjct: 38  GVYSYLPMAVRALRKVEAIIREEMNSAGGQEVLLPALQPSD-LWEKTGRWQAYGPELFRL 96

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            D   +  +L         DL + + R   +           +R     R        F 
Sbjct: 97  HDRHERAFALGPTHEEVITDLVSQVIRSYRQLPFIAYQIQTKFRDERRPRFGILRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                       +A      M          +G
Sbjct: 157 MKDAYSFSVSEENARQIYTRMQEAYGRIFLRLG 189



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%)

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + + AD R  P  +I G     +G  ++K    G+ L   +K+  +   ARV  I
Sbjct: 364 KFQDADLRGFPFQVILGDRHVDKGDGEVKIRRTGERLVLPLKDIPALLSARVQGI 418


>gi|283458510|ref|YP_003363138.1| prolyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134553|dbj|BAI65318.1| prolyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 624

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V I     D+ S    +  +  L +AG++  +      + G +  
Sbjct: 514 DEKGLIWPRNLAPADVHIVITGKDAASHEYAEELSASLESAGLQVMLDDRPKTSPGVKFG 573

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A+    P  ++ G      G+L++KD   G+     ++N               ++E++
Sbjct: 574 DAELLGVPTILVIG-RGFKDGVLELKDRRSGEAREVSVEN--------------AVAEVI 618

Query: 483 STVK 486
           + V+
Sbjct: 619 AEVR 622



 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  ++ + IR   +  G   +  P L   E  ++  +     D     +
Sbjct: 54  GVYTWLPLGLKVLRKVENIIREEMDAIGAQEVHFPALLPREPYEATNR----WDEYGDNL 109

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G  + L  
Sbjct: 110 FRLKDRKGADMLLAP 124


>gi|90020556|ref|YP_526383.1| Pectate lyase/Amb allergen [Saccharophagus degradans 2-40]
 gi|114152247|sp|Q21MA8|SYP_SACD2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89950156|gb|ABD80171.1| prolyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 575

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 46/166 (27%), Gaps = 8/166 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G  +     +R+  ++   +R   +  G   +  P+++ ++ L +      +    
Sbjct: 34  KLASGLYNWLPAGLRVLRKVETIVREEMDRAGAQEVLMPVVQPAE-LWEESGRWQQYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  + D   +   L     ++   L R    N                 +       RF 
Sbjct: 93  LLRINDRHDRAFCLGPTHEEVITDLIR----NELKSYKQLPANFYQIQTKFRDEVRPRFG 148

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
                +     + +  A  E      D + A   K  D        
Sbjct: 149 VMRAREFLMKDAYSFHASQECLQETYDIMHAAYCKIFDRIGLDYRP 194


>gi|300214322|gb|ADJ78738.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 649

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 84/274 (30%), Gaps = 9/274 (3%)

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
           ++ R        GL  V+ +      D          +  + +  +++ +  D + + + 
Sbjct: 365 MMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEI--KTLIKLMTEVYNDFDITDYR 422

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
                +     EK F++  +  +   K     + + +      G   + G   +      
Sbjct: 423 FRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMGLEYFEAEGEAAFYGPKIDVQTKTA 482

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTN 370
           +  E+    +        R+D       G+         G    + R    L  +     
Sbjct: 483 LGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVSTMERFTAYLTEMYKGAF 542

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                   +      +   +      +  LR  GIR  +    ++  G +++ A     P
Sbjct: 543 PTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVD-DRNEKMGYKIRQAQVNKIP 601

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
             ++ G  E S G + ++    G+E +  +  +E
Sbjct: 602 YTLVIGDEEVSNGTVTVR--KYGEEKTNTMTKDE 633



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 9/184 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +    +GF  + TP+L   +   K     D   + +F  
Sbjct: 265 GLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYTPVLANLNLY-KQSGHWDHYREDMFPP 323

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG------PGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK G        R 
Sbjct: 324 MDMGDGEMLELRPMNCPSHIQVYNHHKRSYRELPLRIAELGMMHRYEKSGALTGLSRVRE 383

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          E     +  +M +      I    + +   + K  +   +   + 
Sbjct: 384 MTLNDGHDFIEPDHIEDEIKTLIKLMTEVYNDFDITDYRFRLSYRDPKNTEKYFDDDEMW 443

Query: 186 GDDK 189
              +
Sbjct: 444 EKSQ 447


>gi|90961470|ref|YP_535386.1| threonyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|122993083|sp|Q1WUN2|SYT_LACS1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|90820664|gb|ABD99303.1| Threonyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 649

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 83/274 (30%), Gaps = 9/274 (3%)

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
           ++ R        GL  V+ +      D          +  + +  +++ +  D + + + 
Sbjct: 365 MMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEI--KTLIKLMTEVYNDFDITDYR 422

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
                +     EK F++  +  +   K     + + +      G   + G   +      
Sbjct: 423 FRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMGLEYFEAEGEAAFYGPKIDVQTKTA 482

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTN 370
           +  E+    +        R+D       G+         G    + R    L  +     
Sbjct: 483 LGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVSTMERFTAYLTEMYKGAF 542

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                   +      +   +      +  LR  GIR  +    ++  G +++ A     P
Sbjct: 543 PTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVD-DRNEKMGYKIRQAQVNKIP 601

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
             ++ G  E S G + ++    G+E +  +   E
Sbjct: 602 YTLVIGDEEVSNGTVTVR--KYGEEKTNTMTKAE 633



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 9/184 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +    +GF  + TP+L   +   K     D   + +F  
Sbjct: 265 GLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYTPVLANLNLY-KQSGHWDHYREDMFPP 323

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG------PGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK G        R 
Sbjct: 324 MDMGDGEMLELRPMNCPSHIQVYNHHKRSYRELPLRIAELGMMHRYEKSGALTGLSRVRE 383

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          E     +  +M +      I    + +   + K  +   +   + 
Sbjct: 384 MTLNDGHDFIEPDHIEDEIKTLIKLMTEVYNDFDITDYRFRLSYRDPKNTEKYFDDDEMW 443

Query: 186 GDDK 189
              +
Sbjct: 444 EKSQ 447


>gi|220928798|ref|YP_002505707.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999126|gb|ACL75727.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 645

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 74/257 (28%), Gaps = 21/257 (8%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + I  M+  L I  + +        K          +   + + +R      + +KI   
Sbjct: 405 DLIKFMMETLGIQDDVTYRFSKWDPKNKEKYIGNEEDWENVQDQMRTI---LDHLKIDYK 461

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---GF 351
              G   + G   +         E     V        R + +      +          
Sbjct: 462 EAEGEAAFYGPKLDIQCKNVHGKEDTIITVQVDFALAERLNMVYVDKNNEKKHPYIIHRT 521

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG     +A+   + +      + PV    +          Q   QMLR  G++ E+  
Sbjct: 522 SIGCYERTLAILIEKYAGAFPTWLCPVQAKILPLVDKHHDFAQKVAQMLRDKGVKVEVD- 580

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A     P  ++ G  E     + ++    G               A  
Sbjct: 581 TRNEKIGYKIREAQMEKIPYMLVIGDKEMENNAVSVRSRKDGD------------LGAMP 628

Query: 472 AQITIPISELVSTVKKI 488
           A+  +    +V  ++  
Sbjct: 629 AEQFVDR--IVEEIRTR 643


>gi|322385772|ref|ZP_08059416.1| threonine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270510|gb|EFX53426.1| threonine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 649

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/391 (11%), Positives = 100/391 (25%), Gaps = 23/391 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVAQIT-IPISE 480
            + +  +  +        A +A  + +   +
Sbjct: 619 GQKETQTVSVDEFVEAILADIANKSRVAKED 649



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|115524551|ref|YP_781462.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|122296196|sp|Q07NK2|SYP_RHOP5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115518498|gb|ABJ06482.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 439

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/450 (9%), Positives = 107/450 (23%), Gaps = 56/450 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R      G   +  P L+ +D L +     D     +   
Sbjct: 38  GIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLAD-LWRESGRYDAYGPEML-- 94

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                              R    +   +++      +            +        +
Sbjct: 95  -------------------RIADRHKRELLYGPTNEEMITEIFRAYVKSYKSLPLNLYHI 135

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                  +     +                D       R      +  +       L   
Sbjct: 136 QWKFRDEQRPRFGVMRG--REFLMKDAYSFDIDEAAARRAYNRMFVAYLRTFARMGLKAI 193

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            +             + + L                  +  E +D        DL   + 
Sbjct: 194 PMRAETGPIGGDLSHEFIVLAETGESAVYCDSEVLNLPVPGEDVD-----YDGDLTPIIK 248

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +   +   T    +         E   +      ++      V  + Y+     EA+   
Sbjct: 249 QWTSVYAATEDVHEA--------ERFDREVPAERKLHTRGIEVGQIFYFGTKYSEAMKAL 300

Query: 314 PVMNEK-QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
               +  + P+  GS G G             +     +   ++    A+ +L+      
Sbjct: 301 VAGPDGVEVPIHGGSYGVGVSRLLGAIIEACHDENGIKWPEAVAPFRAAILNLKQ----- 355

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                         +++ +  +   + L   G+   ++  + +  G +   AD    P  
Sbjct: 356 ------------GAAETDAACEQLYRELIAKGVDV-LYDDTDQRAGAKFATADLIGIPWQ 402

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           I+ G    + G +++K  A G   +  +  
Sbjct: 403 ILVGPKGLADGTVELKRRADGSRENVALAE 432


>gi|330834508|ref|YP_004409236.1| threonyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566647|gb|AEB94752.1| threonyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 562

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 42/141 (29%), Gaps = 3/141 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D   S+ +   +    +      + + L+              V +  +    ++     
Sbjct: 415 DEDGSKKRPVMIHRAIYGSLDRMIAILLEHFRGRLPAWLSP--VQVRILPISEENQEYAN 472

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
               MLR  GIR E+   S +    ++K A     P  +I G  E     + I+     +
Sbjct: 473 KILVMLRENGIRGELDP-SGETLSKRIKRAYDEGVPYLVIVGRKEALEEKVTIRSRGNVE 531

Query: 455 ELSREIKNNESWREARVAQIT 475
                +K+        V    
Sbjct: 532 VKGVPLKDFIEKINLEVRNRE 552



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN ++  +R I  + G+  + T  + +   L K     D     +   
Sbjct: 176 GLVLFHPKGQLIRNEMISYMREINSSMGYQEVYTSHV-FRTVLWKISGHYDTYRDKMLIF 234

Query: 74  QDDDGQWISLRYDLTA 89
              D   + ++     
Sbjct: 235 N-KDDDELGIKPMNCP 249


>gi|317164487|gb|ADV08028.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 599

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/166 (10%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 55  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 112

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 113 GRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 172

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +     M          +G
Sbjct: 173 RPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDAYCRIFTRLG 218


>gi|208779640|ref|ZP_03246985.1| prolyl-tRNA synthetase [Francisella novicida FTG]
 gi|208744601|gb|EDZ90900.1| prolyl-tRNA synthetase [Francisella novicida FTG]
          Length = 565

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 54/538 (10%), Positives = 142/538 (26%), Gaps = 78/538 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R+     G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLNDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IK 161
             R        F                     M     + L+ +G            I 
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYATYCNILDKIGLAYRPVKADTGAIG 203

Query: 162 RNDYHIGINNRKILDGILEK-----------IGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
            ++ H         + I+             +  +    L++R+     I+K+    ++ 
Sbjct: 204 GDNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKPDLSKRVNSQNTIEKIHTPNIKT 263

Query: 211 VKLLLGEGRTDNSGDFTK-----------------GANLTSEQIDIMVSFLSIDLEKSMH 253
           ++ L  E   D                           L   +I+ +   ++     +  
Sbjct: 264 IEKLCKEMSFDIKKTIKTMVIKDAEGNFFALVIRGDHELNETKINKLEQIVAPYTLATKE 323

Query: 254 ELYELVKGTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           E++ +          +        +   +    +       +    +    R +  Y   
Sbjct: 324 EIFSIFNANPGSLGIYNCPISIIADYSAIAIIDLVCGANQDDYHFTNVNWDRDVTNYQIA 383

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKG------QNVPATGFS 352
               ++   +  + +  +   +    G        Y   ++          + +    + 
Sbjct: 384 DIRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIGQDGKSKPMLMGCYG 443

Query: 353 IGISRLIVALKSL---ESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGI 405
            G+SR++ A       E+     + + P  +  +                  Q L   GI
Sbjct: 444 FGVSRVMAAAIEQSHDENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDGI 503

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              +    ++  G     AD       ++ G     + +++ K+    ++    I   
Sbjct: 504 DVLLDDRGAR-PGVMFADADLIGYSHHVVIGDRLLEQELIEYKNRKTQEKQEITIAEL 560


>gi|260903858|ref|ZP_05912180.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Brevibacterium
           linens BL2]
          Length = 668

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 45/121 (37%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +T +    +           L+ AG+R E+     + F  +++ A +   P  +
Sbjct: 566 WLAPVQVTCIPVAEEFNDYLAEVAAQLKAAGVRVEIDDSDDR-FPKKIRNASKSKVPFVL 624

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +R    +  +    G++ +                  + ++E VS + + ++   
Sbjct: 625 IAGGDDRDANAVSFR-FRDGEQDNG-----------------VSVAEAVSRIVESIETKA 666

Query: 494 E 494
           +
Sbjct: 667 Q 667


>gi|328946743|gb|EGG40881.1| threonine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 647

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/400 (11%), Positives = 100/400 (25%), Gaps = 36/400 (9%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++    
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR---- 616

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                         R  +    TIP+ E V  +   +   
Sbjct: 617 --------------RYGQKETHTIPVDEFVEQILADIASK 642



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|145295898|ref|YP_001138719.1| prolyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166980117|sp|A4QF01|SYP_CORGB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|140845818|dbj|BAF54817.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 588

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 56/172 (32%), Gaps = 8/172 (4%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E  L      E       G          ++     + +P  G        ++A+ + + 
Sbjct: 416 EGTLTLARGIEIGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGLGVTRLLAVLAEQR 475

Query: 368 STNNIKEMG------PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             +             V +   + D+ ++   + +   L  AG+          + G + 
Sbjct: 476 HDDAGLNWSVEVAPYQVHVVAANKDAAAIEAAERFAAELSAAGLDVLFDDRPKVSPGVKF 535

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K A+    P A+I G    + G ++++ +  G++   +     +     VAQ
Sbjct: 536 KDAELLGMPFALILG-RGYAEGKVELR-VRGGEKSELDADQAVAQIVEMVAQ 585



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R    I   +R   +  G   +  P L   E  ++  ++    D     +
Sbjct: 40  GIYSWLPLGLRAVRNIEAVVREEMDAIGGQELLFPALLPREPYETTQRWTEYGD----SL 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 96  FRLKDRKGADYLLGP 110


>gi|154174749|ref|YP_001407384.1| threonyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|171769252|sp|A7GVZ2|SYT_CAMC5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|112802358|gb|EAT99702.1| threonyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 606

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 42/98 (42%), Gaps = 1/98 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +      L   +   + LR   I +E+    +++   +++ A+++  P+ I+ G
Sbjct: 508 PTQVVIVPISDAHLDYAKEIARELRKFNIDSEVA-SKNESLNKRIRTAEKQRVPMIIVLG 566

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             E +   + ++D     +    +    +  + +++++
Sbjct: 567 DNEVANRSVALRDRQARTQSDMSLAEFLNLTKEKLSEV 604



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R+++   +   + + G++P+  P L  +D   +         + ++  
Sbjct: 232 GLPIWLPNGGRLRSKLEQILYKAHRDRGYEPVRGPELLKADVWKRS-GHYANYKENMY-F 289

Query: 74  QDDDGQWISLRYDLTAP 90
              D     ++      
Sbjct: 290 TTIDDAEYGIKPMNCVG 306


>gi|19553198|ref|NP_601200.1| prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390834|ref|YP_226236.1| prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|81847611|sp|Q8NP31|SYP_CORGL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21324764|dbj|BAB99387.1| Prolyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41326172|emb|CAF20335.1| PROBABLE PROLYL-TRNA SYNTHETASE PROTEIN [Corynebacterium glutamicum
           ATCC 13032]
          Length = 588

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 56/172 (32%), Gaps = 8/172 (4%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E  L      E       G          ++     + +P  G        ++A+ + + 
Sbjct: 416 EGTLTLARGIEIGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGLGVTRLLAVLAEQR 475

Query: 368 STNNIKEMG------PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             +             V +   + D+ ++   + +   L  AG+          + G + 
Sbjct: 476 HDDAGLNWSVEVAPYQVHVVAANKDAAAIEAAERFAAELSAAGLDVLFDDRPKVSPGVKF 535

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K A+    P A+I G    + G ++++ +  G++   +     +     VAQ
Sbjct: 536 KDAELLGMPFALILG-RGYAEGKVELR-VRGGEKSELDADQAVAQIVEMVAQ 585



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R    I   +R   +  G   +  P L   E  ++  ++    D     +
Sbjct: 40  GIYSWLPLGLRAVRNIEAVVREEMDAIGGQELLFPALLPREPYETTQRWTEYGD----SL 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 96  FRLKDRKGADYLLGP 110


>gi|332358692|gb|EGJ36515.1| threonine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 647

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/400 (11%), Positives = 100/400 (25%), Gaps = 36/400 (9%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++    
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR---- 616

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                         R  +    TIP+ E V  +   +   
Sbjct: 617 --------------RYGQKETHTIPVDEFVEQILADIASK 642



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|293192627|ref|ZP_06609581.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292820134|gb|EFF79131.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 677

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 3/102 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     LR  G+R E  L   + FG +++ A +   P  +
Sbjct: 566 WLSPVQVRLIPVAEAFDGYVKDVAAKLRERGVRVETDLSDDR-FGKKIRNASKDKIPFTL 624

Query: 434 IQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQI 474
           I G  +   G +  + L  G + +   +        + + Q 
Sbjct: 625 IAGGEDVEAGAVSFR-LRDGSQHNGVAVDRAVELIVSHIEQR 665


>gi|240013893|ref|ZP_04720806.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240016334|ref|ZP_04722874.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240121462|ref|ZP_04734424.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|260440251|ref|ZP_05794067.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 570

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/166 (10%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +     M          +G
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDAYCRIFTRLG 189


>gi|291457352|ref|ZP_06596742.1| proline--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381187|gb|EFE88705.1| proline--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 597

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 33/110 (30%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +  ++     V +     D  +    +     L   G+          + G + K
Sbjct: 485 DEAGLAWPSVIAPAAVHVVATGKDEKAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFK 544

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    PL  + G    + G ++I+D     +++            R A
Sbjct: 545 DAELIGVPLVAVVGRDYVNDGTIEIRDRNGENKVAVPAAEAAGTLADRFA 594



 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +++ N+I D IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 40  WLPLGLKVLNKIEDIIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 95

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 96  DRHEADYLLAP 106


>gi|154508918|ref|ZP_02044560.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798552|gb|EDN80972.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC
           17982]
          Length = 677

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 3/102 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     LR  G+R E  L   + FG +++ A +   P  +
Sbjct: 566 WLSPVQVRLIPVAEAFDGYVKDVAAKLRERGVRVETDLSDDR-FGKKIRNASKDKIPFTL 624

Query: 434 IQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQI 474
           I G  +   G +  + L  G + +   +        + + Q 
Sbjct: 625 IAGGEDVEAGAVSFR-LRDGSQHNGVAVDRAVELIVSHIEQR 665


>gi|331698443|ref|YP_004334682.1| Prolyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326953132|gb|AEA26829.1| Prolyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 577

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 2/99 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +     + +  +  +     L  AG+   +      + G +  
Sbjct: 469 DESGLVWPRAVSPYDVHVVVAGKNEEITAGGEKLAAELEAAGLSVLLD-DRKASPGVKFA 527

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            A+    P  ++ G    + G +++KD   G+     + 
Sbjct: 528 DAELVGVPTIVVVG-RGLADGKIEVKDRRSGEREEIALD 565



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI + +R   +  G   I+ P L   D   +           +F L
Sbjct: 36  GVYSWLPLGLRVLRRIEEIVREEMDAIGAQEIQFPALLPRDPY-ESTNRWTEYGPNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G    L  
Sbjct: 95  KDRKGNDYLLGP 106


>gi|332638317|ref|ZP_08417180.1| threonyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 658

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 54/470 (11%), Positives = 111/470 (23%), Gaps = 82/470 (17%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  IR  +   I +     G+  + TP++   +   K     D             
Sbjct: 269 WMPNGAAIRRTLERYIVDREVQDGYQHVYTPIMSNLNLY-KQSGHWDHY----------- 316

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                 R D+  P       +     F        P          R  + +   +  +G
Sbjct: 317 ------RDDMFPP------MDMGDGEFLELRPMNCPSHIMVFKHKPRSYRELPFRIAELG 364

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE-KIGLHGDDKLNERLIV 196
                  +     ++   E      + + +          IL   I ++ D  + +    
Sbjct: 365 MMHRYEKSGALTGLSRVREMTLNDGHTFVMPDQIEDEFKKILGLMIDVYADFDITDYRFR 424

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELY 256
           L   D               +   D+         L     D+ + +   + E +     
Sbjct: 425 LSYRDP----------ENTEKYYDDDDMWEKAQTMLKKAMDDLELDYFEAEGEAAF-YGP 473

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVM 316
           +L         G   L  I                    +         +   +  F   
Sbjct: 474 KLDVQIKTALGGEETLSTIQLDFLLPERFDVNYVGPDGELHRPVMIHRGIISTMERFTAY 533

Query: 317 NEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG 376
             +     F +                                                 
Sbjct: 534 LTEMYKGAFPTWLA--------------------------------------------PH 549

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V I  ++ D+      +     L   GIRAE +   ++  G  ++ A     P  ++ G
Sbjct: 550 QVRIIPVNRDAHG-KFAKDLADRLIKQGIRAE-YEDRNEKLGYLIRDAQTSKVPYTLVIG 607

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
             E +   + I+        S+ +   E+   A +A+ +  +  L   VK
Sbjct: 608 DEEVNNNTVTIRRFGSTDTKSKSVDAFEAQLMADIARHSRAMETLEKAVK 657


>gi|325694840|gb|EGD36745.1| threonine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 647

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/400 (11%), Positives = 101/400 (25%), Gaps = 36/400 (9%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            V  +     G  +         V+        +    L F +                 
Sbjct: 455 DV--DYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++    
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR---- 616

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                         R  +    TIP+ E V  +   +   
Sbjct: 617 --------------RYGQKETHTIPVDEFVEQILADIASK 642



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/230 (10%), Positives = 57/230 (24%), Gaps = 10/230 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR             +         +YR  P+   E     R+ +     
Sbjct: 321 MDMGDGEEFVLRPMNCP-------HHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                    + +     +  + ++    +     I +     L     ++ L      ++
Sbjct: 374 -GLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFNLTEYRFRLSLRDPQDTHK 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                   +         +  +  +           G  L  +    + +
Sbjct: 433 YFDNDEMWENAQTMLRAALDEMDVDYFEAEGEAAFYGPKLDIQVKTALGN 482


>gi|156935287|ref|YP_001439203.1| prolyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166980122|sp|A7MI22|SYP_ENTS8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|156533541|gb|ABU78367.1| hypothetical protein ESA_03144 [Cronobacter sakazakii ATCC BAA-894]
          Length = 572

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGDRAFVLGP 108



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYAELRAKGIDVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  ++ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTVVIGDRNLDNDEIEYKYRRDGEKKMIKTGDILDYL 566


>gi|2073564|gb|AAC47516.1| eukaryotic initiation factor eIF-2 alpha kinase [Drosophila
            melanogaster]
          Length = 1589

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 66/480 (13%), Positives = 131/480 (27%), Gaps = 48/480 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL    +           N     L    G  + L 
Sbjct: 970  VIEFVKAKVVNLFRKHGAIEVDSPLLSPLSA----RNSTANANANAVHLMTHSGCVVVLP 1025

Query: 85   YDLTAPLARYVAEN--FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N       +            N          F            + 
Sbjct: 1026 CDLRTQFARHVTMNSVNLIRRYCVDRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDA 1085

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   +   L  +  K  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1086 ELLSLAFEITSELPRLREK--NLAIRMNHTNLLRAILIFCNVPKAQYGALFEGTMDFIES 1143

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      +     ++  S        L +  +    S +     KS+          
Sbjct: 1144 RISRFQFHSSITGIMEKSRTSAQTLMDMLLANFLLTGSRSTVDDSALKSLMRGKGEAASL 1203

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G     EL  +  L    G    +  I       + +        +       +  + 
Sbjct: 1204 ARG--ALRELETVVGLAYSLG---VKCPIHIWAGLPISFDRASNGGIVWQMTADLKPNRS 1258

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNV---PATGFSIGISRLIV------ALKSLESSTNNIK 373
                 +  G RYD ++  F+ Q     PA      +S   +       + ++        
Sbjct: 1259 GHPSVLAIGERYDSMLHEFQKQAQKFNPAMPARGVLSGAGLTFSLDKLVAAVGVEYAKDC 1318

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG--NQLKYADRRNCPL 431
                V I         L       ++L + GIR  +   ++   G   Q   A R     
Sbjct: 1319 RAIDVGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIV-EAASELGDEAQ-DLA-RLGALH 1374

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             I+        G L+++                S+   R  +  +  +ELV  ++K+L+ 
Sbjct: 1375 VILVAE----NGSLRVR----------------SFERERFQERHLTRTELVEFIQKMLRS 1414


>gi|53805116|ref|YP_113204.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|73919805|sp|Q60AZ3|SYT_METCA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53758877|gb|AAU93168.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 638

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 45/119 (37%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +   I   +R ++ + G+  I TPL+  + +L +     ++ 
Sbjct: 255 MQEEAP-GMVFWHPKGWILWQEIEQYMRRVFRDNGYQEIRTPLV-VARTLWERSGHWEKF 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
           +  +F+    + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 SDEMFT-TASEERDYAIKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRNELSGALH 370



 Score = 43.7 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 35/381 (9%), Positives = 98/381 (25%), Gaps = 14/381 (3%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +         +++     V  V  +             +       +
Sbjct: 266 HPKGWILWQEIEQYMRRVFRDNGYQEIRTPLV--VARTLWERSGHWEKFSDEMFTTASEE 323

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           R+     +N    +    + +  + D  L          ++L       +++       D
Sbjct: 324 RDYAIKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRNELSGALHGLMRVRG--FTQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     +  E    +     +  +    E+   +        G +E+   +E   +
Sbjct: 382 DAHIFCTEEQIQDEVSRFIDLLFKVYADFGFSEVQIKLSTRPEKRVGSDEVWDKAEHALE 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDG 336
           +  N+  +        G  Y     +        ++   +              G  Y  
Sbjct: 442 TALNAKGLAWDLQPGEGAFYGPKIEFSL---KDCLDRVWQCGTIQVDFSMPDRLGATYVA 498

Query: 337 LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
                    +        + R +  L    +    +  + PV    ++         +  
Sbjct: 499 EDGARHVPVMLHRAILGSLERFVGILTEHYAGQYPLW-LAPVQAVVLNITDRQADYAREV 557

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            Q   + G R    L  ++  G +++    +  P  +I G  E   G + ++        
Sbjct: 558 AQEFVSKGFRVIADL-RNEKVGFKIREHSMQRVPYLLIVGDKEVEAGSVSLRTRDGKDHG 616

Query: 457 SREIKNNESWREARVAQITIP 477
           S  I +  +       +  + 
Sbjct: 617 SFGIGDLVAKFTEETMKRAVS 637


>gi|332367135|gb|EGJ44871.1| threonine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 647

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/400 (11%), Positives = 100/400 (25%), Gaps = 36/400 (9%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++    
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR---- 616

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                         R  +    TIP+ E V  +   +   
Sbjct: 617 --------------RYGQKETHTIPVDEFVEQILADIASK 642



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|323692417|ref|ZP_08106653.1| threonine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323503557|gb|EGB19383.1| threonine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 645

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 1/111 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +   + L  AGIRAE+    S+  G +++ A  +  P  +
Sbjct: 535 WLAPVQVKVLPISDKYADYAKTVLEELEEAGIRAELD-TRSEKIGYKIREAQTQKIPYML 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E   G + ++    G E S          +  +A   I  +E    
Sbjct: 594 VVGQKEEEEGNVSVRSRFAGDEGSDSTAGFIEKIKKEIAGKEIRQTEAKEE 644



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +L+  R I++  G+  I TP++  +  L +     D     +++ 
Sbjct: 262 GFPFFLPKGMELKNTLLEYWRQIHKKAGYVEISTPVI-LNRKLWETSGHWDHYKDNMYTT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
              D +  +++           A 
Sbjct: 321 VI-DEEDYAIKPMNCPGGVLAYAS 343


>gi|315655426|ref|ZP_07908326.1| threonine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490366|gb|EFU79991.1| threonine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 669

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 42/122 (34%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                LR   +R E+     + FG +++ A +   P  +
Sbjct: 567 WLAPVQVRLVPVAETFNDYCDDIANRLRAENVRVEVDTTDDR-FGKKIRNAAKDKIPFTL 625

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +     +  +    G++ +                  +PI + ++ + + ++  +
Sbjct: 626 IAGGEDAEANAVSFRY-RGGEQKNG-----------------VPIDQAIAEILEAIRSRR 667

Query: 494 EE 495
            +
Sbjct: 668 ND 669


>gi|3046551|gb|AAC13490.1| eIF-2alpha kinase [Drosophila melanogaster]
          Length = 1589

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 66/480 (13%), Positives = 131/480 (27%), Gaps = 48/480 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL    +           N     L    G  + L 
Sbjct: 970  VIEFVKAKVVNLFRKHGAIEVDSPLLSPLSA----RNSTANANANAVHLMTHSGCVVVLP 1025

Query: 85   YDLTAPLARYVAEN--FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N       +            N          F            + 
Sbjct: 1026 CDLRTQFARHVTMNSVNLIRRYCVDRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDA 1085

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   +   L  +  K  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1086 ELLSLAFEITSELPRLREK--NLAIRMNHTNLLRAILIFCNVPKAQYGALFEGTMDFIES 1143

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      +     ++  S        L +  +    S +     KS+          
Sbjct: 1144 RISRFQFHSSITGIMEKSRTSAQTLMDMLLANFLLTGSRSTVDDSALKSLMRGKGEAASL 1203

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G     EL  +  L    G    +  I       + +        +       +  + 
Sbjct: 1204 ARG--ALRELETVVGLAYSLG---VKCPIHIWAGLPISFDRASNGGIVWQMTADLKPNRS 1258

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNV---PATGFSIGISRLIV------ALKSLESSTNNIK 373
                 +  G RYD ++  F+ Q     PA      +S   +       + ++        
Sbjct: 1259 GHPSVLAIGERYDSMLHEFQKQAQKFNPAMPARGVLSGAGLTFSLDKLVAAVGVEYAKDC 1318

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG--NQLKYADRRNCPL 431
                V I         L       ++L + GIR  +   ++   G   Q   A R     
Sbjct: 1319 RAIDVGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIV-EAASELGDEAQ-DLA-RLGALH 1374

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             I+        G L+++                S+   R  +  +  +ELV  ++K+L+ 
Sbjct: 1375 VILVAE----NGSLRVR----------------SFERERFQERHLTRTELVEFIQKMLRS 1414


>gi|145803|gb|AAA23710.1| RNA synthesis factor (drpA) [Escherichia coli]
          Length = 516

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108


>gi|239999200|ref|ZP_04719124.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240080454|ref|ZP_04724997.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240113176|ref|ZP_04727666.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240115935|ref|ZP_04729997.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240118232|ref|ZP_04732294.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240123781|ref|ZP_04736737.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240125970|ref|ZP_04738856.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|240128484|ref|ZP_04741145.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|254493969|ref|ZP_05107140.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268603943|ref|ZP_06138110.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268682406|ref|ZP_06149268.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268684564|ref|ZP_06151426.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|226513009|gb|EEH62354.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268588074|gb|EEZ52750.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268622690|gb|EEZ55090.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268624848|gb|EEZ57248.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 570

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/166 (10%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +     M          +G
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDAYCRIFTRLG 189


>gi|17137328|ref|NP_477230.1| Gcn2 [Drosophila melanogaster]
 gi|7302048|gb|AAF57150.1| Gcn2 [Drosophila melanogaster]
 gi|324096388|gb|ADY17723.1| AT10027p [Drosophila melanogaster]
          Length = 1589

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 66/480 (13%), Positives = 131/480 (27%), Gaps = 48/480 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL    +           N     L    G  + L 
Sbjct: 970  VIEFVKAKVVNLFRKHGAIEVDSPLLSPLSA----RNSTANANANAVHLMTHSGCVVVLP 1025

Query: 85   YDLTAPLARYVAEN--FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N       +            N          F            + 
Sbjct: 1026 CDLRTQFARHVTMNSVNLIRRYCVDRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDA 1085

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   +   L  +  K  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1086 ELLSLAFEITSELPRLREK--NLAIRMNHTNLLRAILIFCNVPKAQYGALFEGTMDFIES 1143

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      +     ++  S        L +  +    S +     KS+          
Sbjct: 1144 RISRFQFHSSITGIMEKSRTSAQTLMDMLLANFLLTGSRSTVDDSALKSLMRGKGEAASL 1203

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G     EL  +  L    G    +  I       + +        +       +  + 
Sbjct: 1204 ARG--ALRELETVVGLAYSLG---VKCPIHIWAGLPISFDRASNGGIVWQMTADLKPNRS 1258

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNV---PATGFSIGISRLIV------ALKSLESSTNNIK 373
                 +  G RYD ++  F+ Q     PA      +S   +       + ++        
Sbjct: 1259 GHPSVLAIGERYDSMLHEFQKQAQKFNPAMPARGVLSGAGLTFSLDKLVAAVGVEYAKDC 1318

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG--NQLKYADRRNCPL 431
                V I         L       ++L + GIR  +   ++   G   Q   A R     
Sbjct: 1319 RAIDVGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIV-EAASELGDEAQ-DLA-RLGALH 1374

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             I+        G L+++                S+   R  +  +  +ELV  ++K+L+ 
Sbjct: 1375 VILVAE----NGSLRVR----------------SFERERFQERHLTRTELVEFIQKMLRS 1414


>gi|268531814|ref|XP_002631035.1| Hypothetical protein CBG02792 [Caenorhabditis briggsae]
          Length = 1693

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 51/399 (12%), Positives = 125/399 (31%), Gaps = 22/399 (5%)

Query: 26   RNRILDSIRNIY----ENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            R  +++++R+ +    + + F+ + T  L    +         +P +      D  G  +
Sbjct: 1069 REMLVETLRSEFCAVLKTHAFEKVHTHTLMPVSTALAAASVRTKPAE----FLDRSGLPV 1124

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
            +L  DL     RY   N    +      R+               +  +C VD++G  + 
Sbjct: 1125 ALPMDLRQNFVRYCVRNSVHRMKRFNFGRVYSA----NTKNVHPHEKWECCVDSIGPQSS 1180

Query: 142  TADAEMCMMMADT-LEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
            +   E  +++    L +  +      + I + ++L+  +  + L  D +L    ++    
Sbjct: 1181 STSLEAELLLVACELISKSLPGMKLTLKIGHAQLLEAQIRHLKLSDDVRLELLDVLHCIS 1240

Query: 201  DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
                +   +     L     + + +      +  E   I       +    +        
Sbjct: 1241 VADRQLSHKEKMESLSPKIGEQAANIITKMLIPVENNFIAFREKVTNFRNKLKADEARSL 1300

Query: 261  GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
               A       +            N + +  S T  R   +  G +++  +     N   
Sbjct: 1301 ADKAINDLQEVIATFKLCRSTELENIDIVYDSQTCYRPRTFDDGLIFQLQV-EKPTNSVG 1359

Query: 321  KPVVFGSVGGGGRYDGLVSRFKGQN------VPATGFSIGISRLIVALKSLESSTNNIKE 374
            K     ++  GGRYD  + R +                      +  ++ + +   +   
Sbjct: 1360 KKKKQQTILAGGRYDSALLRERHPRDIVFEVPLCICGFGVAMDTLAMMREISNKNMDSPV 1419

Query: 375  MGPVLIT--TMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
               VLI      + S+ +++     + L +  I A++F 
Sbjct: 1420 HCKVLICSLVQSNGSNLITEKFKIAKKLWSLNIEADVFH 1458


>gi|300087319|ref|YP_003757841.1| prolyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527052|gb|ADJ25520.1| prolyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 573

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 7/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           + A+L  G         R   +I+D IR+  +  G   I  P+L+  +   K        
Sbjct: 31  MIAQLTAGVYSYLPPAWRTSRKIMDIIRDEMDAAGCQEITMPVLQPIELWQKS-GRGAAF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +F L D     ++L     ++ + LA    +++  +               ++  P 
Sbjct: 90  GDNLFQLTDRKEHTLALGPTHEEVVSDLASRYIQSYRDLPQRL---YQIQTKLRDEPRPR 146



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 20/130 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +T +  +++   +  +     L +AGI   ++    ++ G + 
Sbjct: 454 DDKGIIWPMPIAPWQVHLTGLGLENEPVRAAAEKLYGELTSAGIEV-LYDDRPESPGVKF 512

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             AD    PL +        +G +++K                  + A  A   +P  E+
Sbjct: 513 NDADLLGMPLRLTISPRSMDKGSVEVK------------------QRAEKAFELVPADEV 554

Query: 482 VSTVKKILQE 491
           V   +K++ +
Sbjct: 555 VEVTRKLVSD 564


>gi|261245474|emb|CBG23264.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
          Length = 572

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 566


>gi|152965404|ref|YP_001361188.1| prolyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189083501|sp|A6W7Y5|SYP_KINRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151359921|gb|ABS02924.1| prolyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 586

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 1/103 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +     D +  +  +     L   G+          + G + K
Sbjct: 477 DEKGLVWPRALAPADVHVVATGKDPEIFATAERLAGELVAQGLEVLYDDRPKVSPGVKFK 536

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+    P  ++ G G  + G++++KD   G      + +  S
Sbjct: 537 DAELIGVPTILVVGKG-LAEGLVELKDRRSGDSEQVALDDAVS 578



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  ++   +R   +  G   +  P L   E  ++  ++    D    G+
Sbjct: 40  GIYTWLPLGLKVLRKVEQVVREEMDAAGAQEVHFPALLPREPYEATNRWSDYGD----GI 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 96  FKLKDRKGADYLLAP 110


>gi|218132358|ref|ZP_03461162.1| hypothetical protein BACPEC_00217 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992696|gb|EEC58698.1| hypothetical protein BACPEC_00217 [Bacteroides pectinophilus ATCC
           43243]
          Length = 578

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 68/559 (12%), Positives = 129/559 (23%), Gaps = 99/559 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI  +I   IR   ++ G   +  P+   S SL +           +   
Sbjct: 38  GIYSLFPPMRRITQKIEKIIREEMDSVGCQEVLFPVTLPS-SLWEESGRYQSVGDELLRF 96

Query: 74  QDDDGQWISLRYDLT---APL------ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           +D +G  + L   +T   A +       R  A    +I      +R     R        
Sbjct: 97  KDRNGSQMVLG--MTHEEAAVHLVREYGRSYARYPFSIYQIQTKFRDEARPRAGLIRVRE 154

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           F             S E    +M          VGI         +     +   E + L
Sbjct: 155 FTMKDAYSFHLTQKSLEDYYQQMANSYNRIFAKVGIPEVISVKSDSGMIGGNVSHEYMLL 214

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM---- 240
               + +  L          +     V+  L     +     T       E    +    
Sbjct: 215 CDAGEDSIVLCDDCGYSANIEAAETNVEKELSVEVEELKKVNTPNCKTIEEVGQFLGINK 274

Query: 241 --------------VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN- 285
                          SF+ + +          +   +  +     L   SE++       
Sbjct: 275 ERFCKAVIYQRNEDDSFVVVFIRGDYEVNETKLTNYLHTKVHPAVLTEDSEIIAGFCGPV 334

Query: 286 -----------------SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
                            S+ +   +  +           E      V   K +       
Sbjct: 335 GLKGVSKVIYDKSLTSVSDNMCCGANEIDYHYVGLNLHREIGEIEYVDVAKIQEGGICPC 394

Query: 329 GGGGRYD-----------------------GLVSRFKGQNVPATGFSIGISRLIVA---- 361
                                           V     + VP  G        + A    
Sbjct: 395 CNKKSIRISRGIEVGNIFQLGTKYSDAMGLKYVDTNGEEKVPIMGCYGIGIGRLAASICE 454

Query: 362 --LKSLESSTNNIKEMGPVLITTMDHDS-DSLSKYQMYTQMLRTAGIRAEMFLGSSK-NF 417
                             V I  M  D  +           L+++    E+     K + 
Sbjct: 455 AHHDDYGPIWPISVAPWQVHICCMRADKIECKEVTDRIYNELQSSN--VEVLYDDRKVSA 512

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           G     AD    P+ II G     +G ++I                      +  +  + 
Sbjct: 513 GVMFSDADLLGIPIRIIAGPKNIEQGKVEI------------------LTRNKAVKKLVD 554

Query: 478 ISELVSTVKKILQENKEEI 496
           I  +V  V ++++  ++++
Sbjct: 555 IDSVVEEVGELIKILQKDV 573


>gi|78042796|ref|YP_360595.1| prolyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|114152179|sp|Q3AB89|SYP_CARHZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77994911|gb|ABB13810.1| prolyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 569

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 43/156 (27%), Gaps = 8/156 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+  +I+  IR   +  G   +  P+L+ ++   +           +F 
Sbjct: 37  SGVYTYLPLAQRVLKKIMQIIREEMDRQGGQELMLPILQPAELWLE-TGRWHVYGPELFK 95

Query: 73  LQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           L+D   +   L         DL     R   E    +      YR     R        F
Sbjct: 96  LKDRHNRDFCLGPTHEEIITDLVRREVRSYKELPLLLYQIQNKYRDEKRPRFGLMRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                   D      E +  +M     +     G+K
Sbjct: 156 IMKDLYSFDRDEEGLEISYRKMYEAYTNVFTRCGLK 191



 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 19/124 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +++   + D   +   +    +L  AG    +     +  G + K AD 
Sbjct: 463 IWPAAIAPFEVIVVPVSNKDEQQMKMAEEVYNLLLNAGFEVVIDDRDER-PGVKFKDADL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              PL I  G    S G+ ++K     +E   +                    ELV  ++
Sbjct: 522 IGIPLRITVGKRTVSEGVYEVKIRRTREEKVFQ------------------KEELVDGLR 563

Query: 487 KILQ 490
           ++L+
Sbjct: 564 QLLK 567


>gi|309365075|emb|CAP23791.2| hypothetical protein CBG_02792 [Caenorhabditis briggsae AF16]
          Length = 1692

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 51/399 (12%), Positives = 125/399 (31%), Gaps = 22/399 (5%)

Query: 26   RNRILDSIRNIY----ENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            R  +++++R+ +    + + F+ + T  L    +         +P +      D  G  +
Sbjct: 1068 REMLVETLRSEFCAVLKTHAFEKVHTHTLMPVSTALAAASVRTKPAE----FLDRSGLPV 1123

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
            +L  DL     RY   N    +      R+               +  +C VD++G  + 
Sbjct: 1124 ALPMDLRQNFVRYCVRNSVHRMKRFNFGRVYSA----NTKNVHPHEKWECCVDSIGPQSS 1179

Query: 142  TADAEMCMMMADT-LEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
            +   E  +++    L +  +      + I + ++L+  +  + L  D +L    ++    
Sbjct: 1180 STSLEAELLLVACELISKSLPGMKLTLKIGHAQLLEAQIRHLKLSDDVRLELLDVLHCIS 1239

Query: 201  DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
                +   +     L     + + +      +  E   I       +    +        
Sbjct: 1240 VADRQLSHKEKMESLSPKIGEQAANIITKMLIPVENNFIAFREKVTNFRNKLKADEARSL 1299

Query: 261  GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
               A       +            N + +  S T  R   +  G +++  +     N   
Sbjct: 1300 ADKAINDLQEVIATFKLCRSTELENIDIVYDSQTCYRPRTFDDGLIFQLQV-EKPTNSVG 1358

Query: 321  KPVVFGSVGGGGRYDGLVSRFKGQN------VPATGFSIGISRLIVALKSLESSTNNIKE 374
            K     ++  GGRYD  + R +                      +  ++ + +   +   
Sbjct: 1359 KKKKQQTILAGGRYDSALLRERHPRDIVFEVPLCICGFGVAMDTLAMMREISNKNMDSPV 1418

Query: 375  MGPVLIT--TMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
               VLI      + S+ +++     + L +  I A++F 
Sbjct: 1419 HCKVLICSLVQSNGSNLITEKFKIAKKLWSLNIEADVFH 1457


>gi|268595028|ref|ZP_06129195.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268599257|ref|ZP_06133424.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268686874|ref|ZP_06153736.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268548417|gb|EEZ43835.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268583388|gb|EEZ48064.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268627158|gb|EEZ59558.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 580

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/166 (10%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 36  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 93

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 94  GRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 153

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +     M          +G
Sbjct: 154 RPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDAYCRIFTRLG 199


>gi|254669934|emb|CBA04522.1| Prolyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 570

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +T    M          +G
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLG 189


>gi|225016667|ref|ZP_03705859.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum
           DSM 5476]
 gi|224950631|gb|EEG31840.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum
           DSM 5476]
          Length = 646

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/263 (9%), Positives = 64/263 (24%), Gaps = 15/263 (5%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +   + +    +   L  +       +   + +K +    E            N L
Sbjct: 398 EEEFKQCLELAKFMLETLGLDEDVTYRFSKWDENNRDKYIGSAEEWENVQNLMRGILNHL 457

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++ +      +    + F + +               
Sbjct: 458 E--LDYTEADGEAAFYGPKLDIQIKNVYGKEDTLITIQIDFQLASRFDMVYT-------- 507

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
             D    +     +  T        L + L+    +           I  +         
Sbjct: 508 --DTDGQKKYPYVIHRTSLGCYERTLALLLEKYAGALPLWIAPEQARILPIG--ERQHDA 563

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  LR AG+R E+    S+  G +++ A     P  ++ G  E     + ++    
Sbjct: 564 AYACRDELRKAGLRVEVD-DRSEKIGYKIREAQLEKIPYMLVIGDKEVEANAVSVRSRKH 622

Query: 453 GKELSREIKNNESWREARVAQIT 475
           G+  +  +          V    
Sbjct: 623 GEMGAMPVTQFMEHALNEVRTKE 645



 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+   +   + +  E  G+   +TP    SD   K         +G+F +
Sbjct: 263 GLPVLLPKGARVIQILQRFVEDEEEKRGYLLTKTPYFAKSD-FYKISGHWQHYREGMFVM 321

Query: 74  QD--DDGQWISLRYDLTAPL 91
            D   D +  +LR  +T P 
Sbjct: 322 GDEEKDKEVFALRP-MTCPF 340


>gi|168823087|ref|ZP_02835087.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205340609|gb|EDZ27373.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
          Length = 572

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 566


>gi|194443070|ref|YP_002039482.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|197250542|ref|YP_002145247.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|226701326|sp|B5F8V6|SYP_SALA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701335|sp|B4SV24|SYP_SALNS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194401733|gb|ACF61955.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|197214245|gb|ACH51642.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
          Length = 572

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 566


>gi|168235024|ref|ZP_02660082.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194735941|ref|YP_002113265.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|204926680|ref|ZP_03217882.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|226701337|sp|B4TYF5|SYP_SALSV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194711443|gb|ACF90664.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197291887|gb|EDY31237.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|204323345|gb|EDZ08540.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 572

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 566


>gi|167553343|ref|ZP_02347092.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|238911308|ref|ZP_04655145.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|205322190|gb|EDZ10029.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
          Length = 572

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 566


>gi|161504638|ref|YP_001571750.1| prolyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189083510|sp|A9MPG5|SYP_SALAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160865985|gb|ABX22608.1| hypothetical protein SARI_02759 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 572

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 566


>gi|162139614|ref|YP_215228.2| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|114152248|sp|Q57T14|SYP_SALCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|322713265|gb|EFZ04836.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 572

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.7 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    GK+   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDIVDYL 566


>gi|62126444|gb|AAX64147.1| proline tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Choleraesuis str. SC-B67]
          Length = 547

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
          +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 6  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 64

Query: 67 NKGVFSLQDDDGQWISLRY 85
             +    D   +   L  
Sbjct: 65 GPELLRFVDRGERPFVLGP 83



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 436 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 494

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    GK+   +  +   + 
Sbjct: 495 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDIVDYL 541


>gi|16759234|ref|NP_454851.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|16763631|ref|NP_459246.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29140783|ref|NP_804125.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|56412515|ref|YP_149590.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|161612617|ref|YP_001586582.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167990131|ref|ZP_02571231.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168230553|ref|ZP_02655611.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168245012|ref|ZP_02669944.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168264654|ref|ZP_02686627.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168464192|ref|ZP_02698095.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194449602|ref|YP_002044232.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194472823|ref|ZP_03078807.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197264294|ref|ZP_03164368.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197361450|ref|YP_002141086.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198242516|ref|YP_002214203.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|200386929|ref|ZP_03213541.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205351579|ref|YP_002225380.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207855760|ref|YP_002242411.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|213051828|ref|ZP_03344706.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213428490|ref|ZP_03361240.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213580835|ref|ZP_03362661.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213865222|ref|ZP_03387341.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|81821351|sp|Q5PD80|SYP_SALPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81832731|sp|Q7CR62|SYP_SALTY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81849080|sp|Q8XEY9|SYP_SALTI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083511|sp|A9N0U7|SYP_SALPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701327|sp|B5FJ42|SYP_SALDC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701328|sp|B5R434|SYP_SALEP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701329|sp|B5R5J8|SYP_SALG2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701334|sp|B4TK70|SYP_SALHS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701336|sp|B5BAQ2|SYP_SALPK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|25293215|pir||AF0532 prolyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16418747|gb|AAL19205.1| proline tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16501525|emb|CAD08702.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29136407|gb|AAO67974.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|56126772|gb|AAV76278.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|161361981|gb|ABX65749.1| hypothetical protein SPAB_00308 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194407906|gb|ACF68125.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194459187|gb|EDX48026.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|195632930|gb|EDX51384.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197092926|emb|CAR58355.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197242549|gb|EDY25169.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197937032|gb|ACH74365.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199604027|gb|EDZ02572.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205271360|emb|CAR36153.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205331403|gb|EDZ18167.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205335202|gb|EDZ21966.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205336220|gb|EDZ22984.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205346928|gb|EDZ33559.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206707563|emb|CAR31837.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|267991932|gb|ACY86817.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301156869|emb|CBW16345.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312911213|dbj|BAJ35187.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321225175|gb|EFX50235.1| Prolyl-tRNA synthetase ; Bacterial type [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323128562|gb|ADX15992.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|326621946|gb|EGE28291.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326626606|gb|EGE32949.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332987194|gb|AEF06177.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 572

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 566


>gi|325690794|gb|EGD32795.1| threonine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 647

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/380 (11%), Positives = 98/380 (25%), Gaps = 18/380 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            V  +     G  +         V+        +    L F +                 
Sbjct: 455 DV--DYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++   +
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQ 620

Query: 453 GKELSREIKNNESWREARVA 472
            +  +  +        A +A
Sbjct: 621 KETHTIPVDEFVEQILADIA 640



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/230 (10%), Positives = 57/230 (24%), Gaps = 10/230 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR             +         +YR  P+   E     R+ +     
Sbjct: 321 MDMGDGEEFVLRPMNCP-------HHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                    + +     +  + ++    +     I +     L     ++ L      ++
Sbjct: 374 -GLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFNLTEYRFRLSLRDPQDTHK 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                   +         +  +  +           G  L  +    + +
Sbjct: 433 YFDNDEMWENAQTMLRAALDEMDVDYFEAEGEAAFYGPKLDIQVKTALGN 482


>gi|319744717|gb|EFV97060.1| threonine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 647

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/386 (10%), Positives = 115/386 (29%), Gaps = 20/386 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    I    +     P+   E +         + D+       +  +  +  M  
Sbjct: 277 RYIVDK--EIASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNC 334

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + +K
Sbjct: 335 PHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIK 394

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG-EKGFNE 271
               +       +  +  NLT  +    +S+   + +   ++  E+ +   A  ++  ++
Sbjct: 395 DEFLKALNL-IAEIYEDFNLTDYRF--RLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDD 451

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
             +                            T    +     P   + +     G     
Sbjct: 452 FGLDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGE---- 507

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
                     +   +   G S       + +++ + +         V +  + +++  + 
Sbjct: 508 --------EHRPIMIHRGGISTMERFTAILIETYKGAFPTWLAPQQVSVIPISNEA-HID 558

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 ++L+  GIRAE+    ++    +++ A  +  P  +I G  E     + ++   
Sbjct: 559 YAWEVARVLKDRGIRAEVD-DRNEKMQYKIRAAQTQKIPYQLIVGDKEMEEKGVNVRRYG 617

Query: 452 KGKELSREIKNNESWREARVAQITIP 477
                ++ I+       A +A+ + P
Sbjct: 618 SKATETKSIEEFVESILADIARKSRP 643



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 81/326 (24%), Gaps = 31/326 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 260 GLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMASVE-FYKTSGHWDHYREDMFPT 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V+++  H        I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIEVYKHHVHSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A   +  +   TL    I      I     K L+ I E   ++ D  L +
Sbjct: 359 GMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAE---IYEDFNLTD 415

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--- 249
               L   D  DK         + E       +      L   + +   +F    L+   
Sbjct: 416 YRFRLSYRDPEDKHKYYDN-DEMWENAQAMLKEAMDDFGLDYFEAEGEAAFYGPKLDIQV 474

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K+     E +                 + +   G     I I    +  +E +T  + E 
Sbjct: 475 KTALGNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPIMIHRGGISTMERFTAILIET 532

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYD 335
             G        + V    +      D
Sbjct: 533 YKGAFPTWLAPQQVSVIPISNEAHID 558


>gi|296187094|ref|ZP_06855492.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048288|gb|EFG87724.1| threonyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 560

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 79/262 (30%), Gaps = 7/262 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F    N+T E ++++                EL            +    +  +R
Sbjct: 303 DDAHMFLAKDNITDEIVNVIKLIDDFYKVFGFEYFVELSTRPEDSMGSDEDWEAATNGLR 362

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           K     + I +   +  G   + G   +  L   +    Q   V        R+D     
Sbjct: 363 K---ALDTIGLKYKVNEGDGAFYGPKIDFHLRDCIGRTWQCGTVQLDFQMPERFDLTYIG 419

Query: 341 FKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             G+            G     + +     +      + PV +  M+   D +       
Sbjct: 420 ADGEKHRPVMVHRVVFGSVERFIGILIEHYAGAFPAWLAPVQVKIMNITDDQIDYANKVA 479

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L+   IR E+ L  ++  G +++ A  +  P  ++ G  E     + ++    G   +
Sbjct: 480 KELKKNKIRVEVDL-RNEKIGYKIREAQLQKVPYMLVLGDKEMKENTVAVRSRKLGDLGA 538

Query: 458 REIKNNESWREARVAQITIPIS 479
             +       +  + +    + 
Sbjct: 539 MALDQFVEKIKGEIDRKESSVD 560



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + +  R ++    +D I TP++  ++ L +     D   + ++  
Sbjct: 183 GFPFFHPKGMIIRNTLQNFWREMHSAADYDEIMTPVI-LNEKLWRQSGHWDHYKENMY-F 240

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 241 TKIDNEDYAIKPMNCPG 257


>gi|163737204|ref|ZP_02144622.1| tRNA synthetase, class II (G, H, P and S) [Phaeobacter
           gallaeciensis BS107]
 gi|161389808|gb|EDQ14159.1| tRNA synthetase, class II (G, H, P and S) [Phaeobacter
           gallaeciensis BS107]
          Length = 362

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 103/362 (28%), Gaps = 46/362 (12%)

Query: 32  SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL 91
            +R  +E  G   +E P L+ +++L     ++ R    V S      Q   LR D T P+
Sbjct: 13  RLRMSFEAAGARVVEPPFLQPAETLLDLYGEDIRARAYVTSDALRGEQM--LRPDFTVPV 70

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
              V  +      P R    G VFR ++H   R  +++Q   +                 
Sbjct: 71  ---VEMHMRDGAEPARYTYAGDVFRRQEHDEDRANEYLQVGYEVFERHDPAGSDAEVF-- 125

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL----DKFG 207
              L A+ ++         +  IL   +E +      K      + R            G
Sbjct: 126 --ALIALQLRDLPVRAATGDIGILMAAVEGLNTTSLRKAALMRHIWRPRRFRAMLDQFAG 183

Query: 208 LQGV----KLLLGE------------GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
              V    + LL               R     D    A         +       LE  
Sbjct: 184 RSPVAGSRRKLLSTEGVLTGQVPAIGKRRPAEVDARVEALRADAAAPPIAENELTALEAL 243

Query: 252 M----------HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           M           +L ++     A     + L   +  ++  G + + +   ++  R    
Sbjct: 244 MAVRETIPYASEQLRDIAVDLPAINPALDRLDARTAAMKARGIDVDNLDFEASYGR---- 299

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 E   GF              +  GGRYD L  +            +    L++ 
Sbjct: 300 ---TSMEYYDGFVFGFYADSRPDLPVIASGGRYDALTRQLGQGAEIPAVGGVVRPDLMLL 356

Query: 362 LK 363
           L+
Sbjct: 357 LE 358


>gi|224582089|ref|YP_002635887.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|254782914|sp|C0Q6L7|SYP_SALPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|224466616|gb|ACN44446.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
          Length = 572

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    GK+   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGKKSLIKTGDIVDYL 566


>gi|325204335|gb|ADY99788.1| prolyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 570

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 84  GRWEFYXKELLRLKDRHDRDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +T    M          +G
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYASLQTTYDAMYDAYCRIFTRLG 189


>gi|281201274|gb|EFA75486.1| eukaryotic translation initiation factor 2 alpha kinase
            [Polysphondylium pallidum PN500]
          Length = 2040

 Score = 64.5 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 50/147 (34%), Gaps = 7/147 (4%)

Query: 328  VGGGGRYDG----LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK---EMGPVLI 380
            +  GGRYD      + +   Q +   G +I I +++ +L   +      K       + +
Sbjct: 1758 IMAGGRYDRLINSFLPQATHQQICGVGVTIAIEKMVNSLMQYDQRQIKTKGAKTNSDLEV 1817

Query: 381  TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
                  +  L++    +  L    I+A+       N  +   Y         I+      
Sbjct: 1818 FVCSLGAPMLTEKLQVSTQLWAMNIKADYSPNEYSNVEDIFSYCKENGITWVIVLKERSY 1877

Query: 441  SRGMLQIKDLAKGKELSREIKNNESWR 467
            S GM++I+ +    E     K+   + 
Sbjct: 1878 STGMVKIRHIETRSESVISRKDLVDFI 1904



 Score = 38.7 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
            +  R + +  + NI+ N+G   I+TP+L   DS    LP++D   K      D+ G  
Sbjct: 1621 LLAREKTVTRLCNIFRNHGAIRIDTPILFPIDS---TLPNKDLVAK----FLDEGGNV 1671


>gi|300087925|ref|YP_003758447.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527658|gb|ADJ26126.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 584

 Score = 64.1 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 51/154 (33%), Gaps = 23/154 (14%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +   V             + ++    +         V +  +      L   Q  T 
Sbjct: 444 QEHRPYMVHRALLGSWERFFGLLIEHYGGAFPVWLHPEQVAVLPIA--DRHLEYAQEITA 501

Query: 399 MLRTAGIRAEMFLG-SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            L+ AG+R  +     + N    ++ A     P  ++ G  E  +G L ++ L  G++  
Sbjct: 502 KLKKAGVRVALDDRSETVNMK--IRQAQLDKIPYIVVIGDKELEKGTLAVR-LRTGQQK- 557

Query: 458 REIKNNESWREARVAQITIPISELVSTVKKILQE 491
                             +P ++ V+ ++++++E
Sbjct: 558 ----------------FGVPPNDFVTLIRQVIEE 575



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K  RIR  + +  R  + ++G++ + TP +  S+ L +           ++S  D D
Sbjct: 206 YGPKAGRIRTTVEEFWRKAHYDHGYELLYTPHIGRSN-LWETSGHLQNYRDIMYSPMDID 264

Query: 78  GQWISLRYDLTA 89
           GQ   ++     
Sbjct: 265 GQDYYVKPMNCP 276


>gi|329765249|ref|ZP_08256829.1| threonyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138155|gb|EGG42411.1| threonyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 624

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/213 (9%), Positives = 50/213 (23%), Gaps = 1/213 (0%)

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
               +    ELV              +              +     A+    +  E   
Sbjct: 394 YNENKSSIEELVKKHGRPVLVEMWKEKFFYFVLKWEFNFVDSMGKASALSTDQIDVENGN 453

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                 V         +      +         +                   + P  + 
Sbjct: 454 RYGIEFVDEHNVRKHPIILHNSPSGAIERIVYVLLEKAAQDIKEGRKPQFPLWLAPTQVR 513

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +    +  S        L +  IR ++    +++ G +++ A++      ++ G  E +
Sbjct: 514 VIPLKEEFSSICDTLVDKLSSFNIRVDID-DRNESIGKRIRDAEKDWIRYTLVIGEKEAN 572

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              L I+D   G        N  +    +  + 
Sbjct: 573 SENLSIRDRQTGNVRELTFDNFINEINEQTKEK 605


>gi|217969648|ref|YP_002354882.1| prolyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506975|gb|ACK53986.1| prolyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 582

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 48/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R   ++   +R   +  G   +  P+++ ++ L       D+ 
Sbjct: 31  MIRKVAAGIYSYMPMGLRAIRKVEAIVREEMDRAGAMELIMPMVQPAE-LWDETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +   +D   +  +L+    ++   +AR   +++  +       +             
Sbjct: 90  GDELLRFKDRHERDFALQPTSEEVVTDIARQELKSYRQLPKNFYQIQTKFRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D    +A  +   M        + +G
Sbjct: 150 MRGREFTMKDAYSFDRSEEAAGRSYDIMFAAYKRIFDRLG 189


>gi|268596592|ref|ZP_06130759.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268601604|ref|ZP_06135771.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268550380|gb|EEZ45399.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268585735|gb|EEZ50411.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 580

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/166 (10%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 36  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 93

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +   K +  L+D   +   +     ++ A + R    ++  +       +       
Sbjct: 94  GRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEV 153

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F            +S +     M          +G
Sbjct: 154 RPRFGVMRAREFVMKDAYSFHADYASLQATYDAMYDAYCRIFTRLG 199


>gi|28212194|ref|NP_783138.1| prolyl-tRNA synthetase [Clostridium tetani E88]
 gi|81841121|sp|Q890M2|SYP_CLOTE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28204638|gb|AAO37075.1| prolyl-tRNA synthetase [Clostridium tetani E88]
          Length = 570

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 72/256 (28%), Gaps = 6/256 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R ++  G  +     +R+  +I D +R   +N G        L  S+ L K  
Sbjct: 26  MLRAGMMR-KMASGVYNFMPFGLRVIKKIEDIVREEMDNAGAQEFLASALLPSE-LWKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D     +F LQD + +   L     ++   +AR    ++  +       +       
Sbjct: 84  GRWDVFGPEMFRLQDRNNREFCLGPTHEEVFTDIARNEINSYKQLPLNLYQIQTKYRDER 143

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
                    +                       M +    + I+       +       G
Sbjct: 144 RPRFGLMRSREFIMKDAYSFDKDYEDLDVSYKKMYEAYHNIFIRCGLECNCVEADSGAMG 203

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
                      ++ E   +           ++    +  +   +   +  K      + I
Sbjct: 204 GAGSAEFMVKSEVGEDE-IAFCDSCGYGANIEKAPAISEKFDQEELKELAKIETPNVKTI 262

Query: 238 DIMVSFLSIDLEKSMH 253
           D ++ FL I+  K + 
Sbjct: 263 DQLIKFLEINPAKLVK 278



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 5/108 (4%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              +I     +++  +  D + +   +     L++ G+   +   + +  G + K AD  
Sbjct: 462 WPLSIAPYHVIVVPVITKDEEQMKAAEEIYNKLKSMGVEVLLDDRAER-PGVKFKDADLI 520

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             P+ +  G      G ++ K     KE   EI N E   +    +  
Sbjct: 521 GIPIRVTVGKK-IKEGKVEYK---LRKEEDLEILNIEQVYDKVREEFE 564


>gi|322616066|gb|EFY12983.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322620849|gb|EFY17709.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322623800|gb|EFY20637.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322627248|gb|EFY24039.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322630555|gb|EFY27319.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322638227|gb|EFY34928.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322645504|gb|EFY42031.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322648203|gb|EFY44670.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322657523|gb|EFY53795.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322663843|gb|EFY60043.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322666676|gb|EFY62854.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322672166|gb|EFY68278.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322676523|gb|EFY72594.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322679385|gb|EFY75430.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|323193468|gb|EFZ78676.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197510|gb|EFZ82645.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323201221|gb|EFZ86290.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323209616|gb|EFZ94549.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323212132|gb|EFZ96956.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323216437|gb|EGA01163.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323223373|gb|EGA07708.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323225934|gb|EGA10154.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323228525|gb|EGA12654.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323236862|gb|EGA20938.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323239638|gb|EGA23685.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242315|gb|EGA26344.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323249977|gb|EGA33873.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323252407|gb|EGA36258.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323255690|gb|EGA39443.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323262873|gb|EGA46423.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323265359|gb|EGA48855.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323271854|gb|EGA55272.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 566


>gi|258652410|ref|YP_003201566.1| prolyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258555635|gb|ACV78577.1| prolyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 585

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 36/109 (33%), Gaps = 2/109 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ +   ++    L  AGI   +    + + G +  
Sbjct: 477 DDKGLIWPREVAPADVHVVIAGKSAEIVDTAELIAAGLDAAGITVMLD-DRNASVGVKFA 535

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            A+    P   + G    + G+++++D A G +    +        ARV
Sbjct: 536 DAELIGVPTICVVG-RGVANGVVEVRDRASGDKTEVPLVEVVEQLRARV 583



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G         R+   +   +R   +  G   +  P L   E  ++ G++    D     +
Sbjct: 40  GIYTWLPLGYRVLRNVERIVREEMDAIGAQEVHFPALLPREPYEATGRWTEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD       L  
Sbjct: 96  FRLQDRKQGDYLLGP 110


>gi|146310396|ref|YP_001175470.1| prolyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980121|sp|A4W6T9|SYP_ENT38 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145317272|gb|ABP59419.1| prolyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L       ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWVESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERSFVLGP 108



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDNLAPFQVAILPMNMHKSYRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  ++ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTVVIGDRNLDSDDIEYKYRRSGEKQMIKTGDILDYL 566


>gi|157156008|ref|YP_001461365.1| prolyl-tRNA synthetase [Escherichia coli E24377A]
 gi|166980119|sp|A7ZHT6|SYP_ECO24 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157078038|gb|ABV17746.1| prolyl-tRNA synthetase [Escherichia coli E24377A]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|317487879|ref|ZP_07946471.1| threonyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325830610|ref|ZP_08164031.1| threonine--tRNA ligase [Eggerthella sp. HGA1]
 gi|316913005|gb|EFV34522.1| threonyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325487356|gb|EGC89798.1| threonine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 637

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 43/114 (37%), Gaps = 19/114 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +              + L+ AG R E++   ++    ++  A  +  P  +
Sbjct: 540 WLAPVQVAVLPLADRHNEAAHELAKQLKAAGGRIEVY-DQNEPMRVKIAKAQSQKIPYMV 598

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           + G  E   G + +++  +G        +  +W          P+ +LV  +++
Sbjct: 599 VLGDKEIENGTVSVRERHEG--------DLGAW----------PVEQLVEKLRE 634



 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 18  CPTKEIRIRNRILDSIR-NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD 76
              K  R+   + + +R ++YE  G++ + TP +  +D   K         + ++    +
Sbjct: 263 YLPKGARVIRTMQEWLRRDLYER-GYEEVITPHVYNADV-WKTSGHYGFYKENMYFFNIN 320

Query: 77  DGQW 80
           +G  
Sbjct: 321 EGTD 324


>gi|242238324|ref|YP_002986505.1| prolyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130381|gb|ACS84683.1| prolyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +    D   +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFVDRGDRPFVLGPTHEEVITDLIRNEISSYKQLPLNFYQIQTK 138



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 33/111 (29%), Gaps = 3/111 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +   Q LR  GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFQVAILPMNMHKSFRVQEVAESIYQQLRAKGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
               +    P  I+ G        ++ K   KG++   ++ +  ++   ++
Sbjct: 520 FADMELIGVPHTIVIGDRNLDNDDIEYKHRRKGEKEMIKVGDIVNFLTVQI 570


>gi|254474973|ref|ZP_05088359.1| tRNA synthetase, class II [Ruegeria sp. R11]
 gi|214029216|gb|EEB70051.1| tRNA synthetase, class II [Ruegeria sp. R11]
          Length = 358

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 52/369 (14%), Positives = 107/369 (28%), Gaps = 46/369 (12%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
           +   +R  +E  G   +E P L+ +++L     ++ R    V +      Q   LR D T
Sbjct: 6   LASRLRMNFEAAGARVVEPPYLQPAETLLDLYGEDIRARAYVTTDALRGEQM--LRPDFT 63

Query: 89  APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            P+   V  +      P R    G VFR ++H   R  +++Q   +        +     
Sbjct: 64  VPV---VQMHMSHGAEPARYTYAGEVFRRQEHDEDRANEYLQVGYEVFDRKDPASADAEV 120

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
                 L A+ ++         +  IL   ++ +      K      + R          
Sbjct: 121 F----ALIALQLRDMPVRAATGDIGILMAAVQGLNTTDLRKAALMRHIWRPRRFRALLDR 176

Query: 209 --------QGVKLLLG--------------------EGRTDNSGDFTKGANLTSEQIDIM 240
                      + LL                     + R D          +   +I  +
Sbjct: 177 FAGRAPLADSRRKLLSTEGVLTGQVPAIGKRRPAEIDARVDALRADAAEPPIAEHEILAL 236

Query: 241 VSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   +   +  +  +L ++     +     + L   +  ++  G +   +   ++  R 
Sbjct: 237 EALMAVRETIPYASEQLRDIAVDLPSINPALDRLDARTAAMKARGIDIETLDFEASYGR- 295

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
                    E   GF              +  GGRYD L  +            +    L
Sbjct: 296 ------TSMEYYDGFVFGFYADARPDLPVIASGGRYDALTRQLGQGAEIPAVGGVLRPDL 349

Query: 359 IVALKSLES 367
           ++ L+  E 
Sbjct: 350 MLRLEGAEQ 358


>gi|33589498|gb|AAQ22516.1| LD22885p [Drosophila melanogaster]
          Length = 1312

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 66/480 (13%), Positives = 131/480 (27%), Gaps = 48/480 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL    +           N     L    G  + L 
Sbjct: 693  VIEFVKAKVVNLFRKHGAIEVDSPLLSPLSA----RNSTANANANAVHLMTHSGCVVVLP 748

Query: 85   YDLTAPLARYVAEN--FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N       +            N          F            + 
Sbjct: 749  CDLRTQFARHVTMNSVNLIRRYCVDRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDA 808

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   +   L  +  K  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 809  ELLSLAFEITSELPRLREK--NLAIRMNHTNLLRAILIFCNVPKAQYGALFEGTMDFIES 866

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      +     ++  S        L +  +    S +     KS+          
Sbjct: 867  RISRFQFHSSITGIMEKSRTSAQTLMDMLLANFLLTGSRSTVDDSALKSLMRGKGEAASL 926

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G     EL  +  L    G    +  I       + +        +       +  + 
Sbjct: 927  ARG--ALRELETVVGLAYSLG---VKCPIHIWAGLPISFDRASNGGIVWQMTADLKPNRS 981

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNV---PATGFSIGISRLIV------ALKSLESSTNNIK 373
                 +  G RYD ++  F+ Q     PA      +S   +       + ++        
Sbjct: 982  GHPSVLAIGERYDSMLHEFQKQAQKFNPAMPARGVLSGAGLTFSLDKLVAAVGVEYAKDC 1041

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG--NQLKYADRRNCPL 431
                V I         L       ++L + GIR  +   ++   G   Q   A R     
Sbjct: 1042 RAIDVGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIV-EAASELGDEAQ-DLA-RLGALH 1097

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             I+        G L+++                S+   R  +  +  +ELV  ++K+L+ 
Sbjct: 1098 VILVAE----NGSLRVR----------------SFERERFQERHLTRTELVEFIQKMLRS 1137


>gi|315604309|ref|ZP_07879375.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315314015|gb|EFU62066.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 677

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                LR  G+R E  L   + FG +++ A +   P  +
Sbjct: 566 WLSPVQVRLIPVAEAFDGYVADVAAKLRERGVRVETDLSDDR-FGKKIRNASKDKIPFTL 624

Query: 434 IQGTGERSRGMLQIKDLAKGKE 455
           I G  +   G +  + L  G +
Sbjct: 625 IAGGEDVEAGAVSFR-LRDGSQ 645


>gi|294634711|ref|ZP_06713243.1| proline--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091887|gb|EFE24448.1| proline--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ N++ + +R      G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLNKVENIVREEMNYAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +    D   +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFVDRGERPFVLGPTHEEVITDLVRNEISSYKQLPLNFYQIQTK 138



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR  GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFQVAILPMNMHKSFRVKDVAERLYDALRLKGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++L   +   E++  A++A
Sbjct: 520 FADMELIGIPYTIVIGDRNLDNNEVEYKYRRDGEKLMISLDEIEAFLLAQIA 571


>gi|15799876|ref|NP_285888.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15829450|ref|NP_308223.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168752178|ref|ZP_02777200.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168765280|ref|ZP_02790287.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168769963|ref|ZP_02794970.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168777697|ref|ZP_02802704.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168782925|ref|ZP_02807932.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789305|ref|ZP_02814312.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168802460|ref|ZP_02827467.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|195939891|ref|ZP_03085273.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208809448|ref|ZP_03251785.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208812619|ref|ZP_03253948.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208821168|ref|ZP_03261488.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209398549|ref|YP_002268803.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217324314|ref|ZP_03440398.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254791327|ref|YP_003076164.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261226949|ref|ZP_05941230.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255353|ref|ZP_05947886.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281017|ref|YP_003497835.1| Prolyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|81848971|sp|Q8X8W2|SYP_ECO57 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731431|sp|B5Z0H4|SYP_ECO5E RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|12512925|gb|AAG54496.1|AE005195_5 proline tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13359652|dbj|BAB33619.1| proline tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187767123|gb|EDU30967.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188013912|gb|EDU52034.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188999651|gb|EDU68637.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189361055|gb|EDU79474.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189364925|gb|EDU83341.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189371068|gb|EDU89484.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189375548|gb|EDU93964.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208729249|gb|EDZ78850.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208733896|gb|EDZ82583.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208741291|gb|EDZ88973.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209159949|gb|ACI37382.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209745624|gb|ACI71119.1| proline tRNA synthetase [Escherichia coli]
 gi|209745626|gb|ACI71120.1| proline tRNA synthetase [Escherichia coli]
 gi|209745628|gb|ACI71121.1| proline tRNA synthetase [Escherichia coli]
 gi|209745630|gb|ACI71122.1| proline tRNA synthetase [Escherichia coli]
 gi|209745632|gb|ACI71123.1| proline tRNA synthetase [Escherichia coli]
 gi|217320535|gb|EEC28959.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254590727|gb|ACT70088.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290760890|gb|ADD54851.1| Prolyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320190279|gb|EFW64929.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320640001|gb|EFX09586.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320644771|gb|EFX13815.1| prolyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652927|gb|EFX21165.1| prolyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320658315|gb|EFX26044.1| prolyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320663625|gb|EFX30909.1| prolyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668938|gb|EFX35733.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326339750|gb|EGD63558.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326345084|gb|EGD68827.1| prolyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|327463110|gb|EGF09431.1| threonine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 647

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/380 (11%), Positives = 97/380 (25%), Gaps = 18/380 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++   +
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQ 620

Query: 453 GKELSREIKNNESWREARVA 472
            +  +  +        A +A
Sbjct: 621 KETHTIPVDEFVEQILADIA 640



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|218693660|ref|YP_002401327.1| prolyl-tRNA synthetase [Escherichia coli 55989]
 gi|256021628|ref|ZP_05435493.1| prolyl-tRNA synthetase [Shigella sp. D9]
 gi|293476853|ref|ZP_06665261.1| prolyl-tRNA synthetase [Escherichia coli B088]
 gi|300921804|ref|ZP_07137964.1| prolyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301325160|ref|ZP_07218690.1| prolyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|254782900|sp|B7LHA4|SYP_ECO55 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218350392|emb|CAU96077.1| prolyl-tRNA synthetase [Escherichia coli 55989]
 gi|291321306|gb|EFE60748.1| prolyl-tRNA synthetase [Escherichia coli B088]
 gi|300421799|gb|EFK05110.1| prolyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300847966|gb|EFK75726.1| prolyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|323935035|gb|EGB31408.1| prolyl-tRNA synthetase [Escherichia coli E1520]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|227122|prf||1614347A Pro-tRNA synthetase
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|332282869|ref|ZP_08395282.1| prolyl-tRNA synthetase [Shigella sp. D9]
 gi|332105221|gb|EGJ08567.1| prolyl-tRNA synthetase [Shigella sp. D9]
          Length = 590

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 49  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 107

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 108 GPELLRFVDRGERPFVLGP 126



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 479 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 537

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 538 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 589


>gi|254037614|ref|ZP_04871691.1| prolyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226840720|gb|EEH72722.1| prolyl-tRNA synthetase [Escherichia sp. 1_1_43]
          Length = 590

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 49  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 107

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 108 GPELLRFVDRGERPFVLGP 126



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 479 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 537

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 538 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 589


>gi|30061751|ref|NP_835922.1| prolyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56479623|ref|NP_706140.2| prolyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|74310815|ref|YP_309234.1| prolyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|82542793|ref|YP_406740.1| prolyl-tRNA synthetase [Shigella boydii Sb227]
 gi|157159661|ref|YP_001456979.1| prolyl-tRNA synthetase [Escherichia coli HS]
 gi|162139361|ref|YP_687766.2| prolyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|170021452|ref|YP_001726406.1| prolyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|187730943|ref|YP_001878997.1| prolyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188494186|ref|ZP_03001456.1| prolyl-tRNA synthetase [Escherichia coli 53638]
 gi|193063143|ref|ZP_03044234.1| prolyl-tRNA synthetase [Escherichia coli E22]
 gi|193067639|ref|ZP_03048606.1| prolyl-tRNA synthetase [Escherichia coli E110019]
 gi|194439920|ref|ZP_03071982.1| prolyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209917387|ref|YP_002291471.1| prolyl-tRNA synthetase [Escherichia coli SE11]
 gi|218552775|ref|YP_002385688.1| prolyl-tRNA synthetase [Escherichia coli IAI1]
 gi|253774778|ref|YP_003037609.1| prolyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160314|ref|YP_003043422.1| prolyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256025507|ref|ZP_05439372.1| prolyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260842426|ref|YP_003220204.1| prolyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260853405|ref|YP_003227296.1| prolyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|293418080|ref|ZP_06660702.1| prolyl-tRNA synthetase [Escherichia coli B185]
 gi|297519907|ref|ZP_06938293.1| prolyl-tRNA synthetase [Escherichia coli OP50]
 gi|300820114|ref|ZP_07100286.1| prolyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300825388|ref|ZP_07105464.1| prolyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300932153|ref|ZP_07147436.1| prolyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300949771|ref|ZP_07163746.1| prolyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300956080|ref|ZP_07168404.1| prolyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301028690|ref|ZP_07191910.1| prolyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301646520|ref|ZP_07246394.1| prolyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|307136795|ref|ZP_07496151.1| prolyl-tRNA synthetase [Escherichia coli H736]
 gi|307311357|ref|ZP_07590999.1| prolyl-tRNA synthetase [Escherichia coli W]
 gi|331640649|ref|ZP_08341797.1| proline--tRNA ligase [Escherichia coli H736]
 gi|331666440|ref|ZP_08367321.1| proline--tRNA ligase [Escherichia coli TA271]
 gi|331680776|ref|ZP_08381435.1| proline--tRNA ligase [Escherichia coli H591]
 gi|81839318|sp|Q83MC8|SYP_SHIFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152250|sp|Q325U6|SYP_SHIBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152252|sp|Q3Z5G3|SYP_SHISS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148887036|sp|Q0T815|SYP_SHIF8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980120|sp|A7ZWE2|SYP_ECOHS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083498|sp|B1IQE6|SYP_ECOLC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701281|sp|B7M1Z9|SYP_ECO8A RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701284|sp|B6HZR3|SYP_ECOSE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701339|sp|B2U338|SYP_SHIB3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|30039993|gb|AAP15727.1| proline tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56383174|gb|AAN41847.2| proline tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|73854292|gb|AAZ86999.1| proline tRNA synthetase [Shigella sonnei Ss046]
 gi|81244204|gb|ABB64912.1| proline tRNA synthetase [Shigella boydii Sb227]
 gi|157065341|gb|ABV04596.1| prolyl-tRNA synthetase [Escherichia coli HS]
 gi|169756380|gb|ACA79079.1| prolyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|187427935|gb|ACD07209.1| prolyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188489385|gb|EDU64488.1| prolyl-tRNA synthetase [Escherichia coli 53638]
 gi|192931051|gb|EDV83654.1| prolyl-tRNA synthetase [Escherichia coli E22]
 gi|192959051|gb|EDV89487.1| prolyl-tRNA synthetase [Escherichia coli E110019]
 gi|194421166|gb|EDX37191.1| prolyl-tRNA synthetase [Escherichia coli 101-1]
 gi|209910646|dbj|BAG75720.1| prolyl-tRNA synthase [Escherichia coli SE11]
 gi|218359543|emb|CAQ97083.1| prolyl-tRNA synthetase [Escherichia coli IAI1]
 gi|242376026|emb|CAQ30709.1| prolyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325822|gb|ACT30424.1| prolyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972215|gb|ACT37886.1| prolyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253976424|gb|ACT42094.1| prolyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|257752054|dbj|BAI23556.1| prolyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257757573|dbj|BAI29070.1| prolyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|281599550|gb|ADA72534.1| putative prolyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|291430798|gb|EFF03796.1| prolyl-tRNA synthetase [Escherichia coli B185]
 gi|299878289|gb|EFI86500.1| prolyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300317074|gb|EFJ66858.1| prolyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300450836|gb|EFK14456.1| prolyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300460090|gb|EFK23583.1| prolyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300522148|gb|EFK43217.1| prolyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300527328|gb|EFK48390.1| prolyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|301075273|gb|EFK90079.1| prolyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306908336|gb|EFN38834.1| prolyl-tRNA synthetase [Escherichia coli W]
 gi|315059413|gb|ADT73740.1| prolyl-tRNA synthetase [Escherichia coli W]
 gi|315616320|gb|EFU96938.1| prolyl-tRNA synthetase [Escherichia coli 3431]
 gi|320173324|gb|EFW48527.1| prolyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320186617|gb|EFW61342.1| prolyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320200278|gb|EFW74864.1| prolyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323157966|gb|EFZ44068.1| prolyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323165899|gb|EFZ51681.1| prolyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323170987|gb|EFZ56636.1| prolyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323380028|gb|ADX52296.1| prolyl-tRNA synthetase [Escherichia coli KO11]
 gi|323939929|gb|EGB36127.1| prolyl-tRNA synthetase [Escherichia coli E482]
 gi|323945673|gb|EGB41722.1| prolyl-tRNA synthetase [Escherichia coli H120]
 gi|323959956|gb|EGB55603.1| prolyl-tRNA synthetase [Escherichia coli H489]
 gi|323970674|gb|EGB65930.1| prolyl-tRNA synthetase [Escherichia coli TA007]
 gi|324019415|gb|EGB88634.1| prolyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118316|gb|EGC12211.1| prolyl-tRNA synthetase [Escherichia coli E1167]
 gi|331040395|gb|EGI12602.1| proline--tRNA ligase [Escherichia coli H736]
 gi|331066651|gb|EGI38528.1| proline--tRNA ligase [Escherichia coli TA271]
 gi|331072239|gb|EGI43575.1| proline--tRNA ligase [Escherichia coli H591]
 gi|332762067|gb|EGJ92338.1| prolyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332765044|gb|EGJ95272.1| prolyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332768698|gb|EGJ98878.1| prolyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333009265|gb|EGK28721.1| prolyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333010690|gb|EGK30123.1| prolyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333011036|gb|EGK30455.1| prolyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333021831|gb|EGK41080.1| prolyl-tRNA synthetase [Shigella flexneri K-227]
 gi|333022223|gb|EGK41462.1| prolyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|295399847|ref|ZP_06809828.1| prolyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978250|gb|EFG53847.1| prolyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 567

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 4/104 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++   IR      G   +  P L+ ++ L +           
Sbjct: 34  QSASGVYTFLPLGQRVLQKVEAIIREEMNRAGAVELLMPALQPAE-LWQQSGRWYSYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR 110
           +  L+D   +  +L     ++   L R   +++  +       +
Sbjct: 93  LMRLKDRHERDFALGPTHEEMITTLVRDEVKSYKRLPLTLYQIQ 136



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 20/124 (16%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +      LIT      +       + + LR AG+   ++    +  G +   +D  
Sbjct: 464 WPVAVAPFHVHLITANAKSEEQRQLADEWYEKLRQAGLEV-LYDDRPERAGVKFADSDLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P+ +  G      G++++K    G+                   + +P+ EL+ T+++
Sbjct: 523 GIPVRVTVGKR-AGEGVVEVKVRQTGE------------------SVEVPVHELIDTIQR 563

Query: 488 ILQE 491
           +LQ+
Sbjct: 564 LLQQ 567


>gi|308048689|ref|YP_003912255.1| prolyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630879|gb|ADN75181.1| prolyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 570

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R      G      P+++ +D L +     D  
Sbjct: 31  MIRKLAAGLYTWLPSGLRVLRKVENIVREEMNRAGAVETLMPVVQPAD-LWQETGRWDDM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +  L+D   +   L     ++   L R   +++  +          +R     R   
Sbjct: 90  GAEMARLKDRHDRDFVLGPTHEEVITDLVRNEIKSYKQLPINLYQIQTKFRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             + +     M       LE +G
Sbjct: 150 MRAREFLMKDAYSFHLDQETMDETYQAMYDAYCRILERMG 189



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     L  AGI   +F    +  G  
Sbjct: 460 DDRGIIWPDAIAPYQVAILPMNMHKSHRVAELAEKLYAELTAAGIEV-LFDDRKERPGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G      G ++ K    G++    I     + + + A
Sbjct: 519 FADHELIGIPHTIVIGDRGIDDGNVEYKVRKTGEKSELAIDQVVEFFKGKFA 570


>gi|218703449|ref|YP_002410968.1| prolyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293403264|ref|ZP_06647361.1| prolyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293408287|ref|ZP_06652127.1| prolyl-tRNA synthetase [Escherichia coli B354]
 gi|298378800|ref|ZP_06988684.1| prolyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300900763|ref|ZP_07118909.1| prolyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|301025919|ref|ZP_07189405.1| prolyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331661569|ref|ZP_08362493.1| proline--tRNA ligase [Escherichia coli TA143]
 gi|226701283|sp|B7N862|SYP_ECOLU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218430546|emb|CAR11412.1| prolyl-tRNA synthetase [Escherichia coli UMN026]
 gi|284919970|emb|CBG33025.1| prolyl-tRNA synthetase [Escherichia coli 042]
 gi|291430179|gb|EFF03193.1| prolyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291472538|gb|EFF15020.1| prolyl-tRNA synthetase [Escherichia coli B354]
 gi|298281134|gb|EFI22635.1| prolyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300355748|gb|EFJ71618.1| prolyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300395774|gb|EFJ79312.1| prolyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|331061484|gb|EGI33447.1| proline--tRNA ligase [Escherichia coli TA143]
 gi|332341528|gb|AEE54862.1| prolyl-tRNA synthetase ProS [Escherichia coli UMNK88]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQIK 571


>gi|157147374|ref|YP_001454693.1| prolyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166980115|sp|A8AL94|SYP_CITK8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157084579|gb|ABV14257.1| hypothetical protein CKO_03172 [Citrobacter koseri ATCC BAA-895]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 32/130 (24%), Gaps = 21/130 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYGELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  I+ G        ++ K    G++                    I   E
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEK------------------QLIKTGE 561

Query: 481 LVSTVKKILQ 490
           +V  + K ++
Sbjct: 562 IVDFLVKAIK 571


>gi|194428300|ref|ZP_03060842.1| prolyl-tRNA synthetase [Escherichia coli B171]
 gi|194413675|gb|EDX29955.1| prolyl-tRNA synthetase [Escherichia coli B171]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/112 (10%), Positives = 28/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+          ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLSDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|254486305|ref|ZP_05099510.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           GAI101]
 gi|214043174|gb|EEB83812.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           GAI101]
          Length = 359

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 114/356 (32%), Gaps = 36/356 (10%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           +R  +E  G   +E P+L+ +++L     ++ R    V S      Q   LR D T P+ 
Sbjct: 14  LRMTFEEQGAVVVEPPILQPAETLLDLYGEDIRARAYVTSDALRGEQM--LRPDYTLPV- 70

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
             V  +      P R    G VFR ++  P R  +FIQ   +    +   A       + 
Sbjct: 71  --VQMHMAHGADPARYTYAGEVFRRQESDPARANEFIQVGYEVFDRTDPAAADAEVFALI 128

Query: 153 ----------DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI------- 195
                          +GI           R+  D ++  I      +             
Sbjct: 129 AHALRGLPVSAVTGDIGILMAAVAGLDTTRRRKDALMRHIWRPRRFRALLDRFAGKTPVP 188

Query: 196 ----VLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSID--L 248
                L A        L G++     E R     +    A L++ Q++++   L I   +
Sbjct: 189 PARAALLAGQAFSDAPLIGLRSGPEIEARITALREDADAAPLSAGQVELIQGVLDIRETM 248

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
             ++ +L +L     A       +   +  +   G  +  +   ++  R          E
Sbjct: 249 PHAISQLRDLAVDLPAISVAVERVAARATALEARGVETETLMFEASFGR-------VSME 301

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
              GF       +     ++  GGRYD L  R            +    L++ L++
Sbjct: 302 YYDGFVFGFRADRRPDLPAIASGGRYDALTRRLGQGGEIPAVGGVMRPGLMLELEA 357


>gi|84683507|ref|ZP_01011410.1| prolyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84668250|gb|EAQ14717.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 444

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/459 (10%), Positives = 119/459 (25%), Gaps = 61/459 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++   I   +    +  G  PI  P L+ +D L +     D  
Sbjct: 31  MIKQQAAGIYSWLPLGYKVLKNIERIVHEEQQRAGHIPILMPTLQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  + D  G+ +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GQEMLRITDRHGRDMLYGPTNEEMVTDIFRAHVGSYKDLP--LTLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +                               ++ Y+  +     L      + 
Sbjct: 148 GVMRGREF----------------------------FMKDGYNFDLTREDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D + +F   A     +       
Sbjct: 180 SYLRTYERMGLQAI------------PMRADGGPIGGDYTHEFLVLAETGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D E +  +  +      + E     L   +    ++    +    +           
Sbjct: 221 VFYDSEITDLKFGDREIDYDSVEACQAVLEEFTSRYARTDETHDEALFNEIPEERRRVAR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F     +      G+       + +        +  +     +       K
Sbjct: 281 GIEVGQIFYFGTKYSE----AMGATVQDSDGNKVPVEMGSHGIGVSRLVGALIEANHDDK 336

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFGNQLK 422
            +      +      ++     D ++ +  +   + L  AG+  E ++   ++  G +  
Sbjct: 337 GI-IWPEGVTPFHCGIVNLKQGDDEADAACETLYKALTAAGL--EPLYDDRNERAGGKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             D    P  I  G      G++++     G+      +
Sbjct: 394 TMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEELAPE 432


>gi|323181612|gb|EFZ67027.1| prolyl-tRNA synthetase [Escherichia coli 1357]
          Length = 547

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
          +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 6  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 64

Query: 67 NKGVFSLQDDDGQWISLRY 85
             +    D   +   L  
Sbjct: 65 GPELLRFVDRGERPFVLGP 83



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 436 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 494

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 495 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 546


>gi|300920118|ref|ZP_07136571.1| prolyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300412852|gb|EFJ96162.1| prolyl-tRNA synthetase [Escherichia coli MS 115-1]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|253576294|ref|ZP_04853624.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844187|gb|EES72205.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 571

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 33/106 (31%), Gaps = 4/106 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G         ++  RI   +R      G   +  P ++ ++   +     +R    
Sbjct: 34  QLAAGIYSYLPLGRKVLLRIEQIVREEMNRAGAQELLLPAMQPAELWQRS-GRYERYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +   +D   +  +L     ++   L R    ++  +       +  
Sbjct: 93  LIRFKDRHDREFALGPTHEEVITSLLRDEVNSYRQLPLTVYQIQTK 138



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 10/128 (7%)

Query: 342 KGQNVPATGFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
             Q +    + IG+SRL+ A+              +I      +I     +   +     
Sbjct: 436 HQQPMIMGCYGIGLSRLMSAIAEQHHDEHGLIWPVSIAPYQVHIIPISVTNPLQMELALQ 495

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI--KDLAKG 453
             + L  AGI   +     +  G++   AD    P  +I G     +G ++   +++ K 
Sbjct: 496 LYEKLTQAGIDVLLDDRDER-PGSKFHDADLIGIPYRVIIGKS-AEQGQVEWVERNIMKR 553

Query: 454 KELSREIK 461
           + +S E  
Sbjct: 554 ELISLEEA 561


>gi|149173541|ref|ZP_01852171.1| threonyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148847723|gb|EDL62056.1| threonyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 726

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 49/462 (10%), Positives = 114/462 (24%), Gaps = 31/462 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   IR  + D I+      G+ P+ +P +   +            +     L   D
Sbjct: 272 WLPKGATIRAVLEDFIKVELTRLGYQPVYSPHIGRVELYETSGHFPYYRDSQFAPLFGHD 331

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTY--RIGPVFRNEKHGPGRFRQFIQCDVDN 135
              +    D      R + E+  +       +          E        + ++     
Sbjct: 332 AGQLV---DF---WVRKLEEDSLSAEDEELFFKSSRVMNCDFEFPPGASREEKLKILKAW 385

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
                      M       +          +  +  R    G + +    G+     R+ 
Sbjct: 386 EHKHERYLLKPMNCPHHAEMYK---SMPRSYRDLPVRLAEFGTVYRHEQTGELNGMLRVR 442

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
            L   D       + V+        +          L + ++ + +     D      E 
Sbjct: 443 GLTQDDAHIFCTPEQVEEEFR-ATLELVKFVLASVGLDNFRVQLSLREPGSDKYVGSEEN 501

Query: 256 YELVKGTI-AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           ++  + ++    +         E             +S  I R  +  T    +     P
Sbjct: 502 WQHAENSLRKVLEASGMSYSECEGEAAFYGPKADFMVSDCIGREWQLGT---VQLDYNLP 558

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
              + +              D    R    +    G         + ++    +      
Sbjct: 559 ERFKLEYTGS----------DNQPHRPVMIHRAPFGSM--ERFTGMLIEHFAGAFPLWLA 606

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              + +  +     +L         LR  G R  +   SSK    +++ A     P   I
Sbjct: 607 PEQIRVLPVS--DKTLDYANEVVAQLRKNGFRVSIDTRSSK-VNAKIRDAQLELIPYMFI 663

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            G  E  +  + ++D   G      + +  +  +    +  +
Sbjct: 664 VGPKEAEQTAVAVRDRIDGDLGPMPLADAIAKLKQEADERLV 705


>gi|191167053|ref|ZP_03028875.1| prolyl-tRNA synthetase [Escherichia coli B7A]
 gi|309796373|ref|ZP_07690782.1| prolyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|190902946|gb|EDV62673.1| prolyl-tRNA synthetase [Escherichia coli B7A]
 gi|308120077|gb|EFO57339.1| prolyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|320180897|gb|EFW55819.1| prolyl-tRNA synthetase [Shigella boydii ATCC 9905]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|239994929|ref|ZP_04715453.1| prolyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 440

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 46/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ N++ + +R      G   +  P+++ +D L +     +  
Sbjct: 31  MIRKLASGLYTWLPSGLRVLNKVANIVREEMNKAGAIEVLMPVVQPAD-LWEESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   L     ++   L R    ++  +       +             
Sbjct: 90  GPELLRIKDRHQRDFVLGPTHEEVITALVRNEISSYKQLPLNLYQIQTKFRDEVRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F            S  E    +M     +    +G
Sbjct: 150 MRGREFTMKDAYSFHLEDSCLEETYQKMYDAYCNIFSRMG 189


>gi|312970296|ref|ZP_07784478.1| prolyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|110613794|gb|ABF02461.1| proline tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|310337794|gb|EFQ02905.1| prolyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|313646744|gb|EFS11203.1| prolyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|323160236|gb|EFZ46194.1| prolyl-tRNA synthetase [Escherichia coli E128010]
 gi|332098769|gb|EGJ03729.1| prolyl-tRNA synthetase [Shigella boydii 3594-74]
 gi|332762199|gb|EGJ92468.1| prolyl-tRNA synthetase [Shigella flexneri 4343-70]
          Length = 547

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
          +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 6  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 64

Query: 67 NKGVFSLQDDDGQWISLRY 85
             +    D   +   L  
Sbjct: 65 GPELLRFVDRGERPFVLGP 83



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 436 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 494

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 495 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 546


>gi|312195608|ref|YP_004015669.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311226944|gb|ADP79799.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 662

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 50/161 (31%), Gaps = 20/161 (12%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
              Y       +   +        I R    L    +       + PV +  +    + +
Sbjct: 518 DMEYQAADGTRQRPFMIHRALFGTIERFFAILLEHYAGAMP-PWLAPVQVVGIPITDEHV 576

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +     L   GIR E+    ++    +++ A ++  P  +I G  + ++  +  +  
Sbjct: 577 PYLKDVAAKLTAKGIRVEVDASDNR-MQKKIRDAQKQKVPYMLIAGADDVAKDAVSFRY- 634

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             G + +                  +P+ E V+ +   ++ 
Sbjct: 635 RDGTQRNA-----------------VPVDEAVAEILDAVER 658


>gi|269219392|ref|ZP_06163246.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211185|gb|EEZ77525.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 709

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +          +     LR AGIR ++ L   + FG +++ A +   P  +
Sbjct: 567 WLAPVQARLVPVAEAFNPYCEEVAAKLRAAGIRVDVDLSDDR-FGKKIRNAAKEKIPFTL 625

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +     +  +                        +  + + E V+ + +++    
Sbjct: 626 IAGGEDAEAEAVSFR------------------YRDGHQENGVSVDEAVAHIGRVVARRV 667

Query: 494 EE 495
            +
Sbjct: 668 ND 669


>gi|260866343|ref|YP_003232745.1| prolyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|257762699|dbj|BAI34194.1| prolyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIIEYLVKQIK 571


>gi|82775586|ref|YP_401933.1| prolyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|114152251|sp|Q32JR3|SYP_SHIDS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81239734|gb|ABB60444.1| proline tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|48783|emb|CAA39134.1| ProRS [Escherichia coli]
 gi|147362|gb|AAA24420.1| prolyl-tRNA synthetase [Escherichia coli]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|194435019|ref|ZP_03067260.1| prolyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|300902015|ref|ZP_07120042.1| prolyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|301305332|ref|ZP_07211428.1| prolyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|331651100|ref|ZP_08352128.1| proline--tRNA ligase [Escherichia coli M718]
 gi|331671699|ref|ZP_08372497.1| proline--tRNA ligase [Escherichia coli TA280]
 gi|194416755|gb|EDX32883.1| prolyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|300405901|gb|EFJ89439.1| prolyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300839437|gb|EFK67197.1| prolyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|315254998|gb|EFU34966.1| prolyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|331051554|gb|EGI23603.1| proline--tRNA ligase [Escherichia coli M718]
 gi|331071544|gb|EGI42901.1| proline--tRNA ligase [Escherichia coli TA280]
 gi|332095137|gb|EGJ00169.1| prolyl-tRNA synthetase [Shigella boydii 5216-82]
 gi|332097597|gb|EGJ02574.1| prolyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|309700402|emb|CBI99691.1| prolyl-tRNA synthetase [Escherichia coli ETEC H10407]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/112 (10%), Positives = 28/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K     ++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNCEKQLIKTGDIVDYLVKQIK 571


>gi|309787126|ref|ZP_07681738.1| prolyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924704|gb|EFP70199.1| prolyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 547

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
          +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 6  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 64

Query: 67 NKGVFSLQDDDGQWISLRY 85
             +    D   +   L  
Sbjct: 65 GPELLRFVDRGERPFVLGP 83



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 436 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 494

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 495 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 546


>gi|148264838|ref|YP_001231544.1| prolyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398338|gb|ABQ26971.1| prolyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 585

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/107 (10%), Positives = 37/107 (34%), Gaps = 4/107 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R   ++ + +R      G   +  P ++ ++ L +     ++ 
Sbjct: 45  MIRKLAAGVYNYLPLGLRSIRKVENIVREEMNRAGAIELLMPTVQPAE-LWQESGRWEQY 103

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR 110
            K +   +D       +     ++   L R   +++  +       +
Sbjct: 104 GKELLRFKDRKDTEFCMGPTHEEVITDLVRREVKSYRQLPINLYQIQ 150



 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 3/108 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQLKYAD 425
                I     ++      +       +     L  AG+   +        F    K AD
Sbjct: 476 IFPLPIAPFHCIISALNMKEEPVRDSSEAIYAQLAAAGVEVLLDDRDERPGFK--FKDAD 533

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               PL I+ G+   + G +++K+   G      I +     +A V +
Sbjct: 534 LIGIPLRIVVGSKNLADGKVELKNRKTGDVELLSIADAVEKVKAAVGE 581


>gi|332358962|gb|EGJ36783.1| threonine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 647

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/380 (11%), Positives = 97/380 (25%), Gaps = 18/380 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++   +
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQ 620

Query: 453 GKELSREIKNNESWREARVA 472
            +  +  +        A +A
Sbjct: 621 KETHTISVDEFVEQILADIA 640



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|323176512|gb|EFZ62104.1| prolyl-tRNA synthetase [Escherichia coli 1180]
          Length = 547

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
          +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 6  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 64

Query: 67 NKGVFSLQDDDGQWISLRY 85
             +    D   +   L  
Sbjct: 65 GPELLRFVDRGERPFVLGP 83



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 436 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 494

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 495 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIIEYLVKQIK 546


>gi|313887818|ref|ZP_07821498.1| proline--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846161|gb|EFR33542.1| proline--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 567

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 81/280 (28%), Gaps = 7/280 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R   +I + +R+  +  G   I    ++ ++   K     ++ 
Sbjct: 31  MIRKSASGVYTYLPLGYRSIRKIENIVRDEMDKAGAMEILMSAIQPAEI-WKESGRWEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +F L+D + +   L     +    L R   +++  +       +             
Sbjct: 90  GPEMFKLRDRNDREFCLGPTAEEYFTTLIRDEVKSYKDLPLNLYQIQTKYRDEKRPRFGI 149

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKI 182
              +           ++        M M +  E +  +   DY I   +   + G     
Sbjct: 150 NRAREFSMKDAYTFDTSPETLHTAYMNMYEAYEKIFDRLELDYKIVEGDNGAMGGTGSHE 209

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +     ++   +           V+ +L +       +     N +   I+ + +
Sbjct: 210 FIALSETGEGVIVYSESGKFGATEEKAPVEYILPQAEDKKDLEKVHTPNAS--TIEEVAN 267

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           FL +D +K    +  ++    A      +  +    +   
Sbjct: 268 FLKVDQKKCAKAIDLMLGDEPALVFIPGDRELNLAKLVAY 307


>gi|161528434|ref|YP_001582260.1| threonyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|238686913|sp|A9A2B1|SYT_NITMS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160339735|gb|ABX12822.1| threonyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 621

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/271 (9%), Positives = 72/271 (26%), Gaps = 12/271 (4%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
             L      +   F K      ++I +        L++   +  +        E  +NE 
Sbjct: 335 RRLRAFTMPDCHAFCKDIPQAVDEIKVRFDLSQSVLKELGIDESDYDMAIRFTEDFYNEN 394

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG---FPVMNEKQKPVVFGSVG 329
               E + K       + +     +   +     +  I        ++  Q  V  G   
Sbjct: 395 KSAIEELVKKHGRP--VLVEMWKEKFFYFVLKWEFNFIDNLGKASALSTDQIDVENGDRY 452

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS------LESSTNNIKEMGPVLITTM 383
           G    D   +      +  +        +   L+                 + P  +  +
Sbjct: 453 GIEFVDENNTAQHPIILHNSPSGAIERIIYALLEKAADDSKKGKKPQLPLWLAPTQVRII 512

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
               +           +    +R ++    +++ G +++ A++      ++ G  E    
Sbjct: 513 PLKEEFYDFCNNLCDKISAQNVRVDVD-DRNESIGKRIREAEKEWIQYILVIGEKEAGSE 571

Query: 444 MLQIKDLAKGKELSREIKNNESWREARVAQI 474
            L I+D   G        +  +    + +  
Sbjct: 572 NLSIRDRQTGNVREVSFDDFMNEINEQTSGK 602


>gi|161510954|ref|YP_089255.2| prolyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|114152209|sp|Q65QU0|SYP_MANSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 571

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 47/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPSGIRVLEKVKNIIREEMNKSGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              ++    +    D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWEQYGLELLRFNDRGNRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M    ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTKESLQATYDVMYQTYSNIFTRLG 189



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M       +  +   Q L   G+         +  G      +    P  +I G    
Sbjct: 480 MNMHKSESVQAYAEELYQTLLAQGVEVIFDDRKER-PGVMFADMELIGVPHMVIIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G ++ K+    ++          + +A V 
Sbjct: 539 ENGEIEYKNRRTSEKQMIAKDQLLDFLKANVN 570


>gi|213423623|ref|ZP_03356603.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 322

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108


>gi|260836923|ref|XP_002613455.1| hypothetical protein BRAFLDRAFT_71943 [Branchiostoma floridae]
 gi|229298840|gb|EEN69464.1| hypothetical protein BRAFLDRAFT_71943 [Branchiostoma floridae]
          Length = 1538

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 128/346 (36%), Gaps = 40/346 (11%)

Query: 158  VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
              ++  +Y I +N+  IL  IL   G+  D       I +     L +  ++ ++ L   
Sbjct: 1093 FDLRERNYVIRLNHTSILTAILTHCGVPED-------IHMEVYSILREAKVEKLRKL--- 1142

Query: 218  GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL-VVIS 276
                         +L+ + ++ +  ++  +    ++++  L+K     +     L     
Sbjct: 1143 ----QVQTRLCSLSLSDQTVECLFRYVEQEGP--VNKISSLLKSLTKNKGQVGALAKQGL 1196

Query: 277  ELVRKSGYNSNRIKISSTIVRGLE--YYTGCVYEAILGFPV-MNEKQKPVVFGSVGGGGR 333
              ++    ++  +++   ++  L   Y        +  F     + +K V    +  GGR
Sbjct: 1197 HELQTIISHAETLEVKQQMIVSLGLVYNVHHFCGLVFQFMAETPKSKKRVGMDVLAAGGR 1256

Query: 334  YDGLVSRFKGQNVPATGFSIGISRLIV---ALKSLESSTNNIKEMGPVLITTMDHD-SDS 389
            YD L+S+FK  ++ +      +   I     + ++   T + +      I       S  
Sbjct: 1257 YDKLISQFKRPSMTSVPGPAAVGVSIAFEKVVSAVSDHTESGQVPSTCDILVCTIGRSSL 1316

Query: 390  LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
            L +     + L  AG+RAE+   S ++      +  +      +I    +    M++++ 
Sbjct: 1317 LKERMRVVRDLWAAGLRAEILYDSMQSPEEIQDHCKQAGILHMVILNIKDHESDMVRVR- 1375

Query: 450  LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
                           S+ + +V +  + +S+LV  +++ L   K+E
Sbjct: 1376 ---------------SFDKDKVVEKKVSVSDLVECLQQKLLAGKQE 1406


>gi|16128187|ref|NP_414736.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|89107075|ref|AP_000855.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|170079831|ref|YP_001729151.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|238899593|ref|YP_002925389.1| prolyl-tRNA synthetase [Escherichia coli BW2952]
 gi|34395980|sp|P16659|SYP_ECOLI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Global RNA
           synthesis factor; AltName: Full=Proline--tRNA ligase;
           Short=ProRS
 gi|226701282|sp|B1XD64|SYP_ECODH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511593|sp|C4ZRT7|SYP_ECOBW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|1552770|gb|AAB08622.1| proline-tRNA ligase [Escherichia coli]
 gi|1786392|gb|AAC73305.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|85674379|dbj|BAA77870.2| prolyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|169887666|gb|ACB01373.1| prolyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|238863283|gb|ACR65281.1| prolyl-tRNA synthetase [Escherichia coli BW2952]
 gi|260450602|gb|ACX41024.1| prolyl-tRNA synthetase [Escherichia coli DH1]
 gi|315134885|dbj|BAJ42044.1| prolyl-tRNA synthetase [Escherichia coli DH1]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIK 571


>gi|327461002|gb|EGF07335.1| threonine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 647

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/380 (11%), Positives = 97/380 (25%), Gaps = 18/380 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++   +
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQ 620

Query: 453 GKELSREIKNNESWREARVA 472
            +  +  +        A +A
Sbjct: 621 KETHTIPVDEFVEQILADIA 640



 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|317129892|ref|YP_004096174.1| threonyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474840|gb|ADU31443.1| threonyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 645

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 56/481 (11%), Positives = 116/481 (24%), Gaps = 100/481 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I ++ E  G+D + TP+L   +   K     D  ++ +F  
Sbjct: 265 GLPLWLPKGATIRRTIERYIVDLEERLGYDHVYTPVLGSVELY-KTSGHWDHYHEDMFPT 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  PV   E     R         
Sbjct: 324 MEMDNEDLVLRPMNCP-------HHMMIYKNQLHSYRNLPVRIAELGTMHRHEMSGALAG 376

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA +        +              +  I D          +DK    
Sbjct: 377 LQRVRAMTLNDAHIFCRPDQLKDEFIRVVELVQNVYQDFGIDDYYFRLSYRDPEDKEKYV 436

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                          +  + +L E   D + D+ +     +     +   +   L K   
Sbjct: 437 DN---------DEMWEKAQAMLKEAMEDMNVDYVEAEGEAAFYGPKLDVQVKTALGKD-- 485

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
              E +          N   +            +  +    ++      T   + A L  
Sbjct: 486 ---ETLSTVQLDFHLPNRFELAY-------VGEDGKEHRPVVIHRGVVSTMERFVAFLIE 535

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                 +    F +                         + +  +            +  
Sbjct: 536 ------EYKGAFPTWLA-------------------PVQVEVIPVSEVHMDYVRRVEDKL 570

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           +   V +     D             +R A                Q++       P  +
Sbjct: 571 KQAGVRVHVDVRDE-------KLGYKIREA----------------QMQK-----IPYIL 602

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E     + ++                  +  +     + + E VS++K+ +Q  K
Sbjct: 603 VLGDKEIEASTVNVR------------------KYGQKDSEAVGLDEFVSSMKEEIQNRK 644

Query: 494 E 494
           +
Sbjct: 645 K 645


>gi|296101364|ref|YP_003611510.1| prolyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055823|gb|ADF60561.1| prolyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDSDEIEYKYRRSGEKQMIKTGDILDYL 566


>gi|322709352|gb|EFZ00928.1| threonyl-tRNA synthetase, putative [Metarhizium anisopliae ARSEF
           23]
          Length = 759

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 58/496 (11%), Positives = 138/496 (27%), Gaps = 53/496 (10%)

Query: 3   KKTKLRAELP--RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKF 59
           K  KL    P   G         RI N I   +R  Y   G+D + +PL+   D  L K 
Sbjct: 307 KNQKLFWFSPLSPGSPFFLPHGTRIFNAIQTMLREQYWMRGYDEVHSPLM--YDVQLWKT 364

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
               D   + +F +        +   D  AP+A        +     +          E 
Sbjct: 365 SGHWDHYQEDMFRVPLKHTHGAA--PD--APVA--------SGPDAAKDADKPAGKDGEN 412

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
               +  Q     +  +                 +L             + +R    G L
Sbjct: 413 AEVAKLEQERLFALKPMNCPGHALMFASEERSYRSLP-----WRVADFSVLHRNEASGAL 467

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             +      K  +    +          L+G+   +    T     F    +   +    
Sbjct: 468 TGLTRV--RKFQQDDAHIFCTIDQVTDELRGLFKFMTHVYTMFGFPFKLKLSTRPDS--- 522

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                 +          + +K  +   KG + ++   +           + ++  + R  
Sbjct: 523 -----YMGKLSDWDAAEDRLKKALQEFKGDDWVINPGDG--AFYGPKIDVTVNDALGREF 575

Query: 300 EYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-NVPATGFSIGISR 357
           +  T    ++    F ++    +     + G G    G+ S       +           
Sbjct: 576 QCATIQLDFQLPQNFNLLYRTNESTADRAKGEGEEEGGIPSGMARPVMIHRAVIGSFDRF 635

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           + + ++              V++  +  D++     +    +L  A + A++ +  +   
Sbjct: 636 MGIIIEHFGGKWPFWLSPRQVMVIPIMKDAE--DYAREVRDILHDAKLYADVDVSGN-TL 692

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             +++ A        ++ G  E  +  + I++                   ++     I 
Sbjct: 693 QKKIRAAQLAQYNFVMVVGAEEIEKRAVNIRNRDD--------------PSSQQKGAMID 738

Query: 478 ISELVSTVKKILQENK 493
           + E+V  + ++  E +
Sbjct: 739 LDEVVKRLVELKAERR 754


>gi|260889054|ref|ZP_05900317.1| proline--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260861114|gb|EEX75614.1| proline--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 570

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 80/251 (31%), Gaps = 6/251 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L RG         R+  +I +  R   +  G   +  P+L+ + SL +        
Sbjct: 31  MIKQLTRGVYTYLPFGYRVLKKIENITREEMDRAGAQELLMPVLQPA-SLWEESGRWFAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D + +  SL     ++   + R    ++  + F     +             
Sbjct: 90  GPELMRLKDRNEREFSLGPTHEEVITDIVRDSISSYKELPFNVYQIQTKFRDEMRPRFGL 149

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKI 182
              +             + +  E  + M DT   +  +   +Y     +   + G +   
Sbjct: 150 MRGREFVMKDGYSFHLTQESLDEEYLNMKDTYSRIFERMGLNYRAVEADTGSIGGDVSHE 209

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   +   + ++   + D           + L E   +            ++ I+ + +
Sbjct: 210 FMVLAESGEDDILYSDSSDYAANVEKATSIIELKESDEEKLPKELVETP-NAKTIEELAN 268

Query: 243 FLSIDLEKSMH 253
           FL+I  EK++ 
Sbjct: 269 FLNIPKEKTVK 279



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 4/108 (3%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYAD 425
                I      +I     D   ++  +     L    I A +   + +  F    K AD
Sbjct: 466 IWPKAIAPYHADIIIANMKDETQVNIGEKLYNELNQNKIEAVLDDRNERAGFK--FKDAD 523

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               PL I+ G G  + G+++IKD   G+    ++++   +    +A+
Sbjct: 524 LIGFPLKIVVGKG-AADGIVEIKDRKTGESTDVKVEDVLKFVNNFMAE 570


>gi|326201675|ref|ZP_08191546.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988275|gb|EGD49100.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 645

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 66/223 (29%), Gaps = 7/223 (3%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + I  M+  L I+ + +        K          +   +   +R      + +K+   
Sbjct: 405 DLIKFMMETLGIEEDVTYRFSKWDPKNKEKYIGNEEDWENVQGQMRTI---LDHLKLDYK 461

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---GF 351
              G   + G   +         E     V        R   +      +          
Sbjct: 462 EAEGEAAFYGPKLDIQCKNVHGKEDTIITVQVDFALAERLSMVYVDKNNEKKHPYIIHRT 521

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG     +A+   + +      + PV    +          Q   QMLR  G++ E+  
Sbjct: 522 SIGCYERTLAMLIEKYAGAFPTWLCPVQAKILPLVDKHHDFAQKVAQMLRDKGVKVEVD- 580

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             ++  G +++ A     P  ++ G  E     + ++   +G 
Sbjct: 581 TRNEKIGYKIREAQMEKIPYMLVIGDKEMESNAVSVRSRKEGD 623



 Score = 43.7 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RI   +   + +  E  G+   +TP +  SD   K          G+F L
Sbjct: 262 GLPLLMPKGARIVQTLQRFVEDEEERRGYVLTKTPFMAKSDLY-KLSGHWQHYKDGMFLL 320

Query: 74  QD--DDGQWISLRYDLTAPL 91
            D   D + ++LR  +T P 
Sbjct: 321 GDEEKDEEVMALRP-MTCPF 339


>gi|224373363|ref|YP_002607735.1| threonyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|254783530|sp|B9L5U7|SYT_NAUPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|223589770|gb|ACM93506.1| threonyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 611

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 7/242 (2%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F +   +  E I ++    SI      +   E+                 +
Sbjct: 354 EFTQDDAHIFCRPDQIEEEVIKVLEFVDSIMERFGFNYEMEISTRPEKSIGSDEIWEKAT 413

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
           E ++K     N +     I  G   + G   +  +   +  + Q   +        R+D 
Sbjct: 414 ESLKK---ALNSLNREYGIDEGGGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERFDI 470

Query: 337 LVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                  + V         IG     +A+ +   +      + P+    +      +   
Sbjct: 471 TYVDENNERVRPVMIHRAIIGSFERFIAILTEHYAGEFPTFIAPIKAIFVPIAESHVEYA 530

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + L  A I  E+F  +  +   +++ A++R     +I G  E   G + I+D  K 
Sbjct: 531 KKLQKELLEADINTEIFASND-SLNKRIRNAEKRRVGYVVIIGDEEVETGTVAIRDRKKR 589

Query: 454 KE 455
           ++
Sbjct: 590 EQ 591


>gi|15679834|ref|NP_276952.1| glycyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|3334352|sp|O27874|SYG_METTH RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|2622981|gb|AAB86312.1| glycyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 565

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 40/119 (33%), Gaps = 20/119 (16%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   V +  + +  + +       + LR +G  AE    SS   G +   AD    
Sbjct: 465 PPHVAPVEVTVLPLVNREEMVMTALEIERNLRRSGFIAEFD--SSGTIGRRYARADEIGV 522

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           P A+         G + +++                      +Q+ + I ELV T++K+
Sbjct: 523 PFAVTVDHETLEDGTVTLRN------------------RDDCSQVRVKIEELVPTLEKL 563



 Score = 43.7 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
          GF D       ++N+I++  R  Y    GF  IE+P +   ++L K     D  N  +
Sbjct: 31 GFVDYGPLGATLKNKIMNRWREFYVVREGFYEIESPTIMPEEAL-KASGHVDHFNDPM 87


>gi|331000280|ref|ZP_08323964.1| proline--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329572446|gb|EGG54099.1| proline--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 582

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 48/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R   +I   +R   +  G   +  P+++ ++ L +      + 
Sbjct: 31  MIRKLAAGVYNYMPMGLRSLKKIERIVREEMDRAGAIELLMPIVQPAE-LWQETGRWQKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +   +D   +   L+    ++   +AR   +++  +       +             
Sbjct: 90  GSELLRFKDRHDRDFVLQPTSEEVVTDIARQEIKSWRQLPVNFYQIQTKFRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D     A  +  +M        + +G
Sbjct: 150 MRGRDFVMKDAYSFDRTAEDAGKSYDKMFEAYCRIFDRLG 189



 Score = 40.6 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 32/130 (24%), Gaps = 21/130 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V+I  + +D   +           LR AGI   +        G  
Sbjct: 470 DDKGIIWPDSIAPFTVVICPVGYDKSEEVQKASNELYGRLREAGIDVILD-DRGLRPGVM 528

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  +  G      G +                  E      +    +P++E
Sbjct: 529 FADWELIGVPHRVTIGDRGLKNGEV------------------EYAHRGDLQNENVPVTE 570

Query: 481 LVSTVKKILQ 490
           +   +   ++
Sbjct: 571 IADKLIAKIK 580


>gi|163740385|ref|ZP_02147779.1| ATP phosphoribosyltransferase regulatory subunit [Phaeobacter
           gallaeciensis 2.10]
 gi|161386243|gb|EDQ10618.1| ATP phosphoribosyltransferase regulatory subunit [Phaeobacter
           gallaeciensis 2.10]
          Length = 362

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 103/362 (28%), Gaps = 46/362 (12%)

Query: 32  SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL 91
            +R  +E  G   +E P L+ +++L     ++ R    V S      Q   LR D T P+
Sbjct: 13  RLRMSFEAAGARVVEPPFLQPAETLLDLYGEDIRARAYVTSDALRGEQM--LRPDFTVPV 70

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
              V  +      P R    G VFR ++H   R  +++Q   +                 
Sbjct: 71  ---VEMHMRDGAEPARYTYAGDVFRRQEHDEDRANEYLQVGYEVFERHDPAGSDAEVF-- 125

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL----DKFG 207
              L A+ ++         +  IL   +E +      K      + R            G
Sbjct: 126 --ALIALQLRDLPVRAATGDIGILMAAVEGLNTTSLRKAALMRHIWRPRRFRAMLDQFAG 183

Query: 208 LQGV----KLLLGE------------GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
              V    + LL               R     D    A         +       LE  
Sbjct: 184 RSPVAGSRRKLLSTEGVLTGQVPAIGKRRPAEVDARVEALRADAAAPPIAENELTALEAL 243

Query: 252 M----------HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           M           +L ++     A     + L   +  ++  G + + +   ++  R    
Sbjct: 244 MAVRETIPYASEQLRDIAVDLPAINPALDRLDARTAAMKARGIDVDSLDFEASYGR---- 299

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 E   GF              +  GGRYD L  +            +    L++ 
Sbjct: 300 ---TSMEYYDGFVFGFYADSRPDLPVIASGGRYDALTRQLGQGAEIPAVGGVVRPDLMLL 356

Query: 362 LK 363
           L+
Sbjct: 357 LE 358


>gi|291533300|emb|CBL06413.1| threonyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 423

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + IRN +++  R ++  +G+  I+TP++     L +     D   + ++  
Sbjct: 49  GFPFFHPNGMVIRNELINYWREVHRQFGYQEIKTPMIMNRK-LWETSGHWDHYKENMY-F 106

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 107 TKIDGEDYAIKPMNCPG 123



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/272 (11%), Positives = 76/272 (27%), Gaps = 20/272 (7%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
             T +        N   ++I  ++              +  +        G +E+   + 
Sbjct: 165 NFTQDDAHIFMLPNQIEDEIQRVIDLFDKVYSTFGLTYHAELSTRPEDSMGSDEVWETAT 224

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
              ++      +K       G  Y     +   L   +    Q   +   +    ++D  
Sbjct: 225 NALRNALEHRGLKYVINEGDGAFYGPKIDFH--LTDSIGRTWQCGTIQLDMLMPEKFDLT 282

Query: 338 VSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                GQ            G     + +     +      + PV +  +      +    
Sbjct: 283 YIGEDGQKHRPVMIHRVVYGSIERFIGILIENYAGAFPAWLAPVQVKILPISDKYVDYAY 342

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + +   GIR E+    ++  G +++ A  +  P +II G  E     + ++   +  
Sbjct: 343 EIKRKMFDLGIRVEVD-DRNEKIGYKIREAQVKKVPYSIIVGESELENKNISVRKRREKD 401

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVK 486
            ++ +                  I+ L+  +K
Sbjct: 402 TVTMDTDTF--------------INNLLEEIK 419


>gi|189205755|ref|XP_001939212.1| prolyl-tRNA synthetase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187975305|gb|EDU41931.1| prolyl-tRNA synthetase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 562

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 14/114 (12%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
            +   +  SK +     L  AG+R E       + G +    + +  PL I  G  +  +
Sbjct: 355 AEAKEELYSKVKKIADDLIEAGVRVETDYREGYSPGWKFNDWELKGIPLRIEFGPKDAEK 414

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           G++                +     +   A+ TI +  LV  V K+L++ +E++
Sbjct: 415 GVVT--------------TSRRDIDDKDAARGTISVDNLVEEVPKLLEQIQEDM 454


>gi|148827919|ref|YP_001292672.1| prolyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166980128|sp|A5UHN3|SYP_HAEIG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148719161|gb|ABR00289.1| prolyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 572

 Score = 64.1 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKIIREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLG 189



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGIPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRTGEKEMISKDKLLSVLNEK 568


>gi|310641908|ref|YP_003946666.1| prolyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2]
 gi|309246858|gb|ADO56425.1| Prolyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2]
          Length = 581

 Score = 64.1 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 5/137 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G         R+  ++   +R+  +  G   +  P+L+ ++ L +     D     
Sbjct: 34  QLAAGMYTYMPLGRRVLRKVEQIVRDEMDRAGAGELLMPVLQPTE-LWQESGRYDVYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  LQD   +  +L     ++   L R    ++  +       +        +   G  R
Sbjct: 93  LMRLQDRHDREFALGPTHEEVITSLIRNEVNSYRKLPVTLYQIQ-TKFRDERRPRFGLLR 151

Query: 127 QFIQCDVDNVGSSAETA 143
                  D     A  A
Sbjct: 152 SREFLMKDAYSFDANWA 168



 Score = 37.5 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 8/121 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IG+SR++ A+             + +      +I     D   +   +     L+  
Sbjct: 454 CYGIGVSRILSAIVEQNHDQNGMIWPHALAPFQVHIIPISVKDRLQMQIAEDLYSQLQDR 513

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G+   +     +  G + K +D    P  I+ G      G ++  +     + S  I + 
Sbjct: 514 GVEVLLDDREER-PGVKFKDSDLVGIPARIVVGKD-AEHGKVEFVERRSSHKESIHIHDV 571

Query: 464 E 464
           E
Sbjct: 572 E 572


>gi|253682125|ref|ZP_04862922.1| threonine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561837|gb|EES91289.1| threonine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 637

 Score = 64.1 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++E  G+  I TP++  +++L       D   + ++  
Sbjct: 261 GFPFFYPKGMTLRNTLENYWREMHEKAGYGEIRTPII-LNENLWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 319 TKIDGEDYAIKPMNCPG 335



 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 46/102 (45%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   + +   +   + L+  GIR E+ L  ++  G +++ A  +  P  +
Sbjct: 534 WLAPVQVKIMNITDNQIEYCKEIEKTLKENGIRVELDL-RNEKIGYKIREAQLQKIPYML 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E +   + ++   +G   + ++ +  +  +  V + T
Sbjct: 593 VLGDKEMNENTIAVRSRKQGDLGAMQLVDFVAMVKKEVQEKT 634


>gi|300783993|ref|YP_003764284.1| prolyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299793507|gb|ADJ43882.1| prolyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 582

 Score = 64.1 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L      +     V I     D    +  +     L  AG+   +        G +  
Sbjct: 474 DDLGLIWPRVASPFDVHIVIAGKDETIAAGAEKIAAELDAAGVEVILD-DRKATPGVKFA 532

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            A+    P  ++ G    + G++++KD   G+     ++      
Sbjct: 533 DAELVGVPTILVVG-RGLANGVVEVKDRRSGEREEIAVEAVVEHL 576



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +R+  RI   +R      G   I+ P L   E  ++ G++    D    G+F L+
Sbjct: 44  WLPLGLRVLRRIEAVVREEMNAMGAQEIQFPALLPREPYETTGRWTEYGD----GLFRLK 99

Query: 75  DDDGQWISLRY 85
           D  G    L  
Sbjct: 100 DRKGADYLLGP 110


>gi|332362439|gb|EGJ40239.1| threonine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 654

 Score = 64.1 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/400 (11%), Positives = 100/400 (25%), Gaps = 36/400 (9%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 286 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 343

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 344 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 403

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 404 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 461

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 462 --GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 508

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 509 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 568

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++    
Sbjct: 569 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR---- 623

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                         R  +    TIP+ E V  +   +   
Sbjct: 624 --------------RYGQKETHTIPVDEFVEQILADIASK 649



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 269 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 327

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 328 MDMGDGEEFVLRPMNCP 344


>gi|52308170|gb|AAU38670.1| ProS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 589

 Score = 64.1 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 47/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 44  MLRAGMIRPMA-SGLYNWLPSGIRVLEKVKNIIREEMNKSGAIEVLMPVVQPAE-LWQES 101

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              ++    +    D   +   L     ++   L R       +    +      +R   
Sbjct: 102 GRWEQYGLELLRFNDRGNRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 161

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M    ++    +G
Sbjct: 162 RPRFGVMRSREFIMKDAYSFHTTKESLQATYDVMYQTYSNIFTRLG 207



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M       +  +   Q L   G+         +  G      +    P  +I G    
Sbjct: 498 MNMHKSESVQAYAEELYQTLLAQGVEVIFDDRKER-PGVMFADMELIGVPHMVIIGEKNL 556

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G ++ K+    ++          + +A V 
Sbjct: 557 ENGEIEYKNRRTSEKQMIAKDQLLDFLKANVN 588


>gi|262277283|ref|ZP_06055076.1| prolyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224386|gb|EEY74845.1| prolyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 442

 Score = 64.1 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 61/491 (12%), Positives = 132/491 (26%), Gaps = 93/491 (18%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++   I   +R      G   +  P ++ +D   K     D  
Sbjct: 31  MIRQSASGIYSWLPMGFKVLKNIEQIVREEQNKAGAIELLMPTIQSADI-WKESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            K +  + D   + +       +L   + R   +++  +      Y I   FR+E     
Sbjct: 90  GKEMLRISDRHERDLLYGPTNEELITQIFRDNIKSYKNLP--LMLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +                                    D              L  + 
Sbjct: 148 GVMR------------------------CREFLMKDTYSFDVDKATAEFSYKKMFLSYLK 183

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                +LN                   +K   G    D S +F   A+    ++ +  + 
Sbjct: 184 TFQKFELNAI----------------PMKAETGPIGGDLSHEFIILADTGESEVFLDKNL 227

Query: 244 LSID------LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
           L ID       EK+++E+ E      +     +++      V K      +      I  
Sbjct: 228 LDIDVNEVDYSEKNINEIIERFSKFYSATDEKHDVNEFENNVSKENQLRTKGIEIGHIFY 287

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
             + Y+  +   +      N   +   +G                   +PA       + 
Sbjct: 288 FGDKYSKSMKALVNNKEGKNINPQMGSYGIGVSR--------------LPAAIIEAKYNG 333

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
             +           +      +I    +  ++  K     Q L  A +   +   +S+N 
Sbjct: 334 TFM------KWPKTVTPFKVAIINLGKNGDEADQKSNEIYQNLINANLDPILD-DTSENP 386

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            ++ K  D    P  II G+    +   + K++  G+E                    + 
Sbjct: 387 SSKFKNFDLIGIPYQIIIGSK-LKKDEFEFKEI--GEEKLI-----------------LS 426

Query: 478 ISELVSTVKKI 488
             E+++ +K+I
Sbjct: 427 KEEVINRLKEI 437


>gi|313837083|gb|EFS74797.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927888|gb|EFS91719.1| threonyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314971856|gb|EFT15954.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 689

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 91/283 (32%), Gaps = 32/283 (11%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +     G     + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTREGGSAKEEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  ++ +    +      Y   +   V +   +     ++            
Sbjct: 474 AATDTLDQVCRNTGLQLVSDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTKFAEVLESRGIRVETDLSSDR-FGKKIRNASKEKVPFVLIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           G +++                  +   E V    +I+    +E
Sbjct: 651 GSQVNG-----------------VARDETV----RIIAAWNDE 672


>gi|228997455|ref|ZP_04157073.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229005099|ref|ZP_04162823.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228756201|gb|EEM05522.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228762288|gb|EEM11216.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 641

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 50/444 (11%), Positives = 111/444 (25%), Gaps = 89/444 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN +   +R I +NY +  + TP++     L +     D     ++  
Sbjct: 265 GMPFYLPKGQIVRNELESFLREIQQNYDYQEVRTPIMMN-QGLWEESGHWDHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLIFKNKLHSYRDLPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +        +                                   
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIESEIKSVLKQIDYVYRTFGF------------------- 416

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                            V+L      +    +    A L+ E +   +++          
Sbjct: 417 --------------EYEVELSTRPEDSMGDDELWNQAELSLENVLKSLNYNYR------- 455

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                           NE        +   +  + ++ S         +       +   
Sbjct: 456 ---------------VNEGDGAFYGPKIDFHIKDALQRSHQCGTVQLDFQMPEKFDLNYI 500

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
              NEK++PVV       G +D  +         A    +     I  +           
Sbjct: 501 DERNEKRRPVVIHRAVL-GSFDRFLGILIEHFGGAFPTWL-APVQIKVIPVSNQVHEQYT 558

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           +     + ++   ++  ++ +     +R A                QL+       P  +
Sbjct: 559 KEIEEKLKSVGLRAERDARSEKLGYKIREA----------------QLQK-----IPYIL 597

Query: 434 IQGTGERSRGMLQIKDLAKGKELS 457
           + G  E   G + ++    G+E S
Sbjct: 598 VIGDKEMENGSVNVR--KYGEEKS 619


>gi|255326388|ref|ZP_05367472.1| proline--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296605|gb|EET75938.1| proline--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 610

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V I     ++ S    +  +  L +AG++  +      + G +  
Sbjct: 500 DEKGLIWPRNLAPADVHIVITGKEAASHEYAEELSASLESAGLQVMLDDRPKTSPGVKFG 559

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A+    P  ++ G      G+L++KD   G+     ++N               ++E++
Sbjct: 560 DAELLGVPTILVIG-RGFKDGVLELKDRRSGEAREVSVEN--------------AVAEVI 604

Query: 483 STVK 486
           + V+
Sbjct: 605 AEVR 608



 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  ++ + IR   +  G   +  P L   E  ++  +     D     +
Sbjct: 40  GVYTWLPLGLKVLRKVENIIREEMDAIGAQEVHFPALLPREPYEATNR----WDEYGDNL 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G  + L  
Sbjct: 96  FRLKDRKGADMLLAP 110


>gi|114566616|ref|YP_753770.1| threonyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318333|sp|Q0AY05|SYT_SYNWW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114337551|gb|ABI68399.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 635

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 2/89 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R  +   G+  I TP++   +   +     D     ++  
Sbjct: 261 GFPFFLPKGMVLRNELENFWREEHRKAGYQEIRTPIILSRELWERS-GHWDHYKDNMY-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTI 102
              D    +++            +N  + 
Sbjct: 319 TTIDEGDYAIKPMNCPGGLLVYKQNLHSY 347



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +     S    +     L  AGIR E    S K  G +++    +  P  +
Sbjct: 534 WLAPVQVRVLPITQRSQDYARQVVAELEQAGIRVEADFRSEK-IGYKIREGQLQKIPYLL 592

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E   G + ++   +G 
Sbjct: 593 VLGDREAEEGTVSVRHRKEGD 613


>gi|328907347|gb|EGG27113.1| threonine--tRNA ligase [Propionibacterium sp. P08]
          Length = 684

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 91/283 (32%), Gaps = 32/283 (11%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +     G     + +   E  +
Sbjct: 409 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTREGGSAKEEKFIGSDEDWQ 468

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  ++ +    +      Y   +   V +   +     ++            
Sbjct: 469 AATDTLDQVCRNTGLQLVSDPGGAAFYGPKVSVQVKDAIGRTWQMSTIQYDFNQPERFDL 528

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 529 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 587

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 588 VTKFAEVLESRGIRVETDLSSDR-FGKKIRNASKEKVPFVLIAGGEDAEAGAVSFR-LRD 645

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           G +++                  +   E V    +I+    +E
Sbjct: 646 GSQVNG-----------------VARDETV----RIIAAWNDE 667


>gi|326771743|ref|ZP_08231028.1| proline--tRNA ligase [Actinomyces viscosus C505]
 gi|326637876|gb|EGE38777.1| proline--tRNA ligase [Actinomyces viscosus C505]
          Length = 610

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 36/133 (27%), Gaps = 18/133 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN--Q 420
                +         V +     D       +     L   G   E+     +      +
Sbjct: 493 DDKGLTWPAQIAPYHVQVLATGKDQAVFDVAEQIASSLDADG--VEVLYDDRRKVSAGVK 550

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
              A+    P  ++ G      G ++I+D   G+  S                     +E
Sbjct: 551 FADAELLGLPYTLVVGRDLAKEGTVEIRDRRTGERRSVPADAAA--------------AE 596

Query: 481 LVSTVKKILQENK 493
           L +TV+  L+  +
Sbjct: 597 LSTTVRAALEAAR 609



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   +I D +R   +  G   +  P L  ++         D     +F L
Sbjct: 40  GVYTWLPLGLRTLRKIEDIVRQEMDAMGGQEVHFPALLPAEPYQA-TGRWDDYGPTLFKL 98

Query: 74  QDDDGQWISLRY 85
           +D       L  
Sbjct: 99  RDRKDGDYLLAP 110


>gi|316932694|ref|YP_004107676.1| Histidine--tRNA ligase [Rhodopseudomonas palustris DX-1]
 gi|315600408|gb|ADU42943.1| Histidine--tRNA ligase [Rhodopseudomonas palustris DX-1]
          Length = 382

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 123/371 (33%), Gaps = 57/371 (15%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           +++   +   G+     P+L+ ++       ++ R  K ++   D  G+ + LR DLT P
Sbjct: 17  EALLQSFAEAGYGQATPPILQPAEPFLDLSGEDIR--KSLYLTTDASGEELCLRPDLTIP 74

Query: 91  LAR-YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCM 149
           +AR Y+         P     +GPVFR     P  F Q           +A  A+     
Sbjct: 75  VARDYLVS--TAAGQPVGFCYLGPVFRQRGGKPSEFLQAGIESFGRQDRAAADAEMLALA 132

Query: 150 MMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL- 208
           + A T    G   +     +     L   L+ + +     + +          L++  L 
Sbjct: 133 LGATTALKAGE-VDIRTGDVALFAALIDALDLMPVWRRRLMKDFHRKASLAHDLERLTLA 191

Query: 209 -------QGVKLLLGEGRTDNSGDFTKGA------------------------------N 231
                  +GV   L       +                                      
Sbjct: 192 PSTSNEYEGVLAALAGSDRKAALALVTDLMSIAGATTLGGRSVAEIADRFLEQSTLKSGA 251

Query: 232 LTSEQIDIMVSFLSIDL---EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           L  + +D +  FL+I     +             ++ +   ++       +   G + ++
Sbjct: 252 LPRDALDKIKRFLAISGAPTDALKALRALAADAKLSIDAAIDQFEARIGFMAGRGIDLSK 311

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVP 347
           ++ S+   RG++YYTG  +E                   +  GGRYDGL+S+      +P
Sbjct: 312 VRFSTAFGRGVDYYTGFEFELHHAGNGDE---------PLVAGGRYDGLMSQLGAASPIP 362

Query: 348 ATGFSIGISRL 358
           A GFSI I  +
Sbjct: 363 AVGFSIWIEAM 373


>gi|238754780|ref|ZP_04616131.1| Prolyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706940|gb|EEP99306.1| Prolyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 572

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        IR+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MVRKLASGLYTWLPTGIRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +    D   +   L     ++   L R    ++  +          +R     R   
Sbjct: 90  GPELLRFVDRGERPFVLGPTHEEVITDLVRGEINSYKQLPLNFFQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M          +G
Sbjct: 150 MRAREFLMKDAYSFHTTQESLQETYDAMYEAYNRIFSRMG 189



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LRT GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRTKGIEVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K+   G++   +      +  +++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKNRRTGEKQMIKTSEIIEFLLSQIK 571


>gi|238763953|ref|ZP_04624909.1| Prolyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238697770|gb|EEP90531.1| Prolyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 572

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR  GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRAHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G        ++ K+   G++   +      +  +++ 
Sbjct: 520 FADMELIGVPHNVVIGDRNLDSEEVEYKNRRAGEKHMIKTSEIIDFLLSQIK 571


>gi|213648168|ref|ZP_03378221.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 306

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108


>gi|194904924|ref|XP_001981086.1| GG11806 [Drosophila erecta]
 gi|190655724|gb|EDV52956.1| GG11806 [Drosophila erecta]
          Length = 1589

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 66/479 (13%), Positives = 131/479 (27%), Gaps = 48/479 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL                N     L    G  + L 
Sbjct: 970  VIEFVKAKVVNLFRKHGAIEVDSPLLSPL----SARNSSANANANAVHLMTHSGCVVVLP 1025

Query: 85   YDLTAPLARYVAEN--FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N       +            N          F            + 
Sbjct: 1026 CDLRTQFARHVTMNSVNLIRRYCVDRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDA 1085

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   +   L  +  K  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1086 ELLSLAFEITSELPRLREK--NLAIRMNHTNLLRAILIFCNVPKAQYEALFEGTMDFIES 1143

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      +     ++  S        L +  +    S +     KS+          
Sbjct: 1144 RISRFQFHSSITGIMEKSRTSAQTLMDMLLANFLLTGSRSTVDDSALKSLMRGKGEAASL 1203

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G     EL  +  L    G    +  I       + + +      +       +  + 
Sbjct: 1204 ARG--ALRELETVVGLAYSLG---VKCPIHIWAGLPISFDSASNGGIVWQMTADLKPNRS 1258

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNV---PATGFSIGISRLIV------ALKSLESSTNNIK 373
                 +  G RYD ++  F+ Q     PA      +S   +       + ++        
Sbjct: 1259 GHPSVLAIGQRYDSMLHEFQKQAQKFNPALPARGVLSGAGLTFSLDKLVAAVGVEYAKDC 1318

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG--NQLKYADRRNCPL 431
                V I         L       ++L + GIR  +   ++   G   Q   A R     
Sbjct: 1319 RAIDVGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIV-EAASELGDEAQ-DLA-RLGALH 1374

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
             I+        G L+++                S+   R  +  +  +ELV  ++K+L+
Sbjct: 1375 VILVAE----NGSLRVR----------------SFERDRFQERHLTRAELVEFIQKMLR 1413


>gi|56416716|ref|YP_153790.1| prolyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81821288|sp|Q5PAZ5|SYP_ANAMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56387948|gb|AAV86535.1| prolyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 425

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 45/157 (28%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++   I   +R   ++ GF  I  P ++ +D L +     D     
Sbjct: 34  QNASGLYTWLPLGLKVLRTIERIVREEMDSSGFLEILMPSVQPAD-LWRESLRYDSYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEKHGP 122
           +  +QD  G+ +       +  + + R   +++  +       +         R+     
Sbjct: 93  MLRMQDRSGREMVFGPTHEEAISDVVRSSLKSYRDLPINLYQIQWKFRDELRPRHGIMRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F        D        +   +          +G
Sbjct: 153 REFLMKDAYSFDVDFEGVMRSYENVFSAYFRIFRRLG 189


>gi|22126985|ref|NP_670408.1| prolyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45442549|ref|NP_994088.1| prolyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108806542|ref|YP_650458.1| prolyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108813091|ref|YP_648858.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|149366930|ref|ZP_01888963.1| prolyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162418775|ref|YP_001607747.1| prolyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165927072|ref|ZP_02222904.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939831|ref|ZP_02228371.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011913|ref|ZP_02232811.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211331|ref|ZP_02237366.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400131|ref|ZP_02305649.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419446|ref|ZP_02311199.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425324|ref|ZP_02317077.1| prolyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470133|ref|ZP_02334837.1| prolyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|218928237|ref|YP_002346112.1| prolyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837776|ref|ZP_04457936.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229840998|ref|ZP_04461157.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843099|ref|ZP_04463249.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903534|ref|ZP_04518647.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270487315|ref|ZP_06204389.1| proline--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503084|ref|YP_003567146.1| prolyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|116256081|sp|Q7CH25|SYP_YERPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123246276|sp|Q1CFH2|SYP_YERPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123372686|sp|Q1CAK9|SYP_YERPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701361|sp|A9R371|SYP_YERPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21960030|gb|AAM86659.1|AE013912_3 proline tRNA synthetase [Yersinia pestis KIM 10]
 gi|45437414|gb|AAS62965.1| prolyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|108776739|gb|ABG19258.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778455|gb|ABG12513.1| prolyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115346848|emb|CAL19734.1| prolyl-tRNA synthetase [Yersinia pestis CO92]
 gi|149290544|gb|EDM40620.1| prolyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162351590|gb|ABX85538.1| prolyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165912234|gb|EDR30871.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920968|gb|EDR38192.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989179|gb|EDR41480.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207102|gb|EDR51582.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962187|gb|EDR58208.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050839|gb|EDR62247.1| prolyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055724|gb|EDR65508.1| prolyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229679304|gb|EEO75407.1| prolyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229689975|gb|EEO82034.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697364|gb|EEO87411.1| prolyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704153|gb|EEO91165.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361122|gb|ACY57843.1| prolyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365363|gb|ACY61920.1| prolyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270335819|gb|EFA46596.1| proline--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353543|gb|ADE63884.1| prolyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320014203|gb|ADV97774.1| prolyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 572

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR+ GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K+   G++   +      +  +++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEFLLSQIK 571


>gi|307595064|ref|YP_003901381.1| Threonyl-tRNA synthetase editing domain-containing protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307550265|gb|ADN50330.1| Threonyl-tRNA synthetase editing domain protein [Vulcanisaeta
           distributa DSM 14429]
          Length = 621

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 82/285 (28%), Gaps = 32/285 (11%)

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
           L      +   FT+      E    +   +  ++ K      + V      ++ ++E   
Sbjct: 338 LRRFYMPDLHIFTRDLKNAMEVALKLHEVIFREIRKL---GRDYVSLYNVTKQFYDEHRD 394

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY---------EAILGFPVMNEKQKPVVF 325
               + K       +++                          A   F V N ++  + +
Sbjct: 395 YLIELAKREGKPILVRVMPEQKYYWVLNVEFHIVDELRRPREIATFQFDVGNAQRFGIKY 454

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
               G  +Y   V            +   +       +S          + PV +  +  
Sbjct: 455 RDENGEVKY--PVIIHTAIIGSVERYIYALLDTAAIAESRGEVPRLPTWVSPVQVRVIPI 512

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
             + L+        L    IR ++     +    +++ A+    P  ++ G  E   G L
Sbjct: 513 SKEHLAFANDIASKLEDRMIRVDIDDRFDETLAKRVRDAETFWVPYIVVVGDREVKTGKL 572

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
            ++   +G +   ++                 + EL+S V++ ++
Sbjct: 573 SVR--VRGTQKPIDMG----------------VDELISRVEEEIK 599


>gi|145598925|ref|YP_001163001.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|166980173|sp|A4TL66|SYP_YERPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145210621|gb|ABP40028.1| prolyl-tRNA synthetase [Yersinia pestis Pestoides F]
          Length = 572

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR+ GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K+   G++   +      +  +++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEFLLSQIK 571


>gi|51245016|ref|YP_064900.1| prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81826866|sp|Q6AP31|SYP_DESPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50876053|emb|CAG35893.1| probable prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 570

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 48/140 (34%), Gaps = 7/140 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G        +    ++ + +R      G   +  P+++ +D L K  
Sbjct: 26  MLRAGFMR-KLSSGVYSYLPYGLAAIRKVENIVREEMNRAGAQEMLMPMVQPAD-LWKET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              ++    +    D + +   L     ++   + R    ++  +      Y+I   FR+
Sbjct: 84  GRYEKYGPELLRFFDRNNRESCLGPTHEEVITDIVRNELSSYRDLP--INLYQIQTKFRD 141

Query: 118 EKHGPGRFRQFIQCDVDNVG 137
           E        +  +  + +  
Sbjct: 142 EIRPRFGLMRGREFVMKDAY 161



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D +  +  +     L+ AG+   +     +  G + K AD    P  +  G G    GM
Sbjct: 479 KDPEITAAAEKLYAELQAAGLSVLLDDRDER-PGAKFKDADLLGIPYRLTVGKGLAKNGM 537

Query: 445 LQIKDLAKG--KELSREIK 461
           ++++    G  +E++ E+ 
Sbjct: 538 VEVRRRRDGHTEEMTPEVA 556


>gi|153947724|ref|YP_001400022.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|170023340|ref|YP_001719845.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|166980172|sp|A7FFJ4|SYP_YERP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701362|sp|B1JQI5|SYP_YERPY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152959219|gb|ABS46680.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|169749874|gb|ACA67392.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 572

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR+ GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K+   G++   +      +  +++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEFLLSQIK 571


>gi|126459249|ref|YP_001055527.1| threonyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166225487|sp|A3MTU4|SYT_PYRCJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126248970|gb|ABO08061.1| aminoacyl-transfer RNA synthetase, class II [Pyrobaculum
           calidifontis JCM 11548]
          Length = 607

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 52/178 (29%), Gaps = 20/178 (11%)

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           I  F +     +      V    +    V            +   +   I   +    + 
Sbjct: 427 IATFQIDVGNAQRFGIKYVDENNQVKYPVIIHTAIIGSVERYLYAVFDTIAKAEREGKTP 486

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + PV +  +    D+L         L  AGIR ++     +    +++ A+    
Sbjct: 487 RLPTWLAPVQVRIIPVARDNLKFAMEVADKLEEAGIRVDVD-DRDETLSKRIRDAETSWV 545

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           P   + G+ E   G L ++   +G                   Q  +   EL+  V++
Sbjct: 546 PYVCVVGSKEEETGTLSVRIRGEG-------------------QAKMTAEELIKRVRE 584


>gi|77164414|ref|YP_342939.1| prolyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254434306|ref|ZP_05047814.1| prolyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|114152222|sp|Q3JCN7|SYP_NITOC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|76882728|gb|ABA57409.1| Prolyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090639|gb|EDZ67910.1| prolyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 574

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            L  G        +R+  ++ + IR   +  G   +  P ++ ++ L +     ++    
Sbjct: 34  RLAAGLYTWLPLGLRVLRKVENIIREEMDKAGAQEVLMPAVQPAE-LWRETGRWEQYGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +    D   ++     
Sbjct: 93  LLRFTDRHQRFFCFGP 108


>gi|327398462|ref|YP_004339331.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181091|gb|AEA33272.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 620

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 38/98 (38%), Gaps = 1/98 (1%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
              +A+       +    + PV +  +       +  +   Q L+  GIR E+    ++ 
Sbjct: 503 ERFIAILIENYEGDFPVWIAPVQVRVLPVSEKHEAYAKDVYQTLKDRGIRVEIE-ERNET 561

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            G ++++A+    P  ++ G  E     + ++   +G 
Sbjct: 562 LGKKIRFAETDKVPYVVVVGDKEIEDKTISVRKRKEGD 599


>gi|116327201|ref|YP_796921.1| ATP phosphoribosyltransferase regulatory subunit [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116332146|ref|YP_801864.1| ATP phosphoribosyltransferase regulatory subunit [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116119945|gb|ABJ77988.1| histidine biosynthesis protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125835|gb|ABJ77106.1| histidine biosynthesis protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 344

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 64/356 (17%), Positives = 138/356 (38%), Gaps = 34/356 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P GF     ++ + R  IL+++  I +  G+  +  P  +YS +  + +      +  +
Sbjct: 14  IPDGFHFLGPEDSKDRRIILETVSGILKKKGYSEVFLPAFDYSSTFLQTI--STPNSSSL 71

Query: 71  FSLQDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           F ++D  G  IS     DLT    + +A  F         + IG +FR    G    ++ 
Sbjct: 72  FRIRDLSGNEIS--PSIDLTVQAVKGMA-GFSHQRENQNIFYIGRIFRESAKGSVSRKEV 128

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +Q   +++G S +    ++   + + +  +    +   + + N  +   I+ +  L+  +
Sbjct: 129 LQIGAESIGVSGKENTFKILEELNEIISIL-PIEDKLTLVLGNVNLFHSIVREFKLNPSE 187

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                         L +  +  ++ + GE + ++       A + +  +D + + L I  
Sbjct: 188 IEILST-------LLYQKNVNEIERIFGEKKNNSILIRLLSALVLNFDLDSLKNSLKIAS 240

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                    L K   +  +    +    E  +        + I  +++R L YYTG V++
Sbjct: 241 PS-----KGLQKNLNSVLEDTFWIFQSWESKK----RKIDLCIDFSLLRDLNYYTGFVFQ 291

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             L                V  GG YD L   F G    A+G+++ ++ L  +LK+
Sbjct: 292 GYLQ----------GSPNPVLTGGAYDHLYEMFSGVQRDASGYALIVNILEASLKN 337


>gi|59800999|ref|YP_207711.1| prolyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|81311217|sp|Q5F938|SYP_NEIG1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|59717894|gb|AAW89299.1| putative prolyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 570

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 40/110 (36%), Gaps = 5/110 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVENVVREEMARAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
              +   K +  L+D   +   +     ++ A + R    ++  +     
Sbjct: 84  GRWEFYGKELLRLKDRHERDFCMGPTCEEVIADIVRKEINSYKQLPKNFY 133


>gi|24379968|ref|NP_721923.1| threonyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|73919830|sp|Q8DT12|SYT_STRMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24377953|gb|AAN59229.1|AE014990_3 putative threonyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 649

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/396 (10%), Positives = 103/396 (26%), Gaps = 21/396 (5%)

Query: 85  YDLTAPLARYVAENF---DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
            D      R + E +     +    +     P+   + +         + D+       +
Sbjct: 268 PDG--ATIRRIIERYITDKEVASGYQHVYTPPIASVDLYKTSGHWDHYREDMFPTMDMGD 325

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
                +  M       V       +  +  R    G++ +    G     +R+  +   D
Sbjct: 326 GESFVLRPMNCPHHIEVYKNHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLND 385

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L  V+    +       D  +  NLT      +      D  K   +     K 
Sbjct: 386 GHTFVALDQVEDEF-KRTLQLIIDVYEDFNLTDYSF-RLSYRDPNDTHKYFDDDEMWEKS 443

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
               +   +++ +                            T    +     P   E   
Sbjct: 444 QTMLKAAMDDMGLDYYEAEGEAAFYGPKLDIQVKTALGNDETLSTIQLDFLLPERFELTY 503

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
               G               +   +     S         +++ + +         V + 
Sbjct: 504 IGADGE------------EHRPVMIHRGIVSTMERFTAYLIETYKGAFPTWLAPHQVTVI 551

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            + +++  +       + LR  GIRA++    ++    +++ +  +  P  +I G  E  
Sbjct: 552 PISNEA-HIDYAWEVAKELRDHGIRADVD-DRNEKMQYKIRQSQTKKVPYQLIVGDKEVE 609

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            G + ++     +  +  I        A + + + P
Sbjct: 610 NGTVNVRRYGSKQTHTESIAEFRENILADIKRKSRP 645



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 46/186 (24%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G+  + TP +   D   K     D   + +F  
Sbjct: 262 GLPFWLPDGATIRRIIERYITDKEVASGYQHVYTPPIASVDLY-KTSGHWDHYREDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+   LR             +  +    P R   +G + R EK          R 
Sbjct: 321 MDMGDGESFVLRPMNCPHHIEVYKNHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          E        ++ D  E   +    + +   +        +   + 
Sbjct: 381 MTLNDGHTFVALDQVEDEFKRTLQLIIDVYEDFNLTDYSFRLSYRDPNDTHKYFDDDEMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 EKSQTM 446


>gi|226311191|ref|YP_002771085.1| threonyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094139|dbj|BAH42581.1| threonyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 637

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 83/258 (32%), Gaps = 5/258 (1%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F +   + SE I  M++ +    +    E    +        G +EL   +E
Sbjct: 381 FCQDDAHVFVRPDQIASE-IKGMITLIDSIYKVFGFEYSVALSTRPEDSMGSDELWEAAE 439

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYD 335
              K+      +        G  Y     ++        ++    +            Y 
Sbjct: 440 SSLKTVLEELGMAYEIKDGDGAFYGPKIDFQITDALKRRHQCGTIQLDFQMPEKFDLTYV 499

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G  +      V        + R I  L    +    I  + P+    M+     +   + 
Sbjct: 500 GQDNEKHRPVVLHRAMYGSMERFIGILIEHYAGAFPIW-LTPIQARIMNISEVHMPYAEQ 558

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             + L+ AGIR E+  G ++  G +++ A     P  ++ G  E + G L ++    G E
Sbjct: 559 VREKLQQAGIRVELD-GRNEKIGYKIREAQVEKIPYMLVIGEKEVADGTLSVRKRGVGDE 617

Query: 456 LSREIKNNESWREARVAQ 473
            +  +        A + +
Sbjct: 618 GAMTVDAFVEKIRAEINE 635



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 40/135 (29%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN +    R + +   +  + +P L   + L K     D   + ++  
Sbjct: 264 GMPFYLPKGFTVRNELEQFSRRLQQLAQYTEVRSPFLMN-ERLWKESGHWDHYKENMY-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +L+             +         +YR  P+  +E     R       + 
Sbjct: 322 SEVDNATYALKPMNCPG-------HMLIYKNEMHSYRDLPIRYSEFGQVHRHEYSGALNG 374

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 375 MLRVRTFCQDDAHVF 389


>gi|217076405|ref|YP_002334121.1| prolyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226701439|sp|B7IFB6|SYP_THEAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217036258|gb|ACJ74780.1| prolyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 561

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R   +I + +R   +  G   I  P+++ ++   +     D     
Sbjct: 34  KIAAGVYTYLPLARRTLLKIENIVREEMDKIGAQEILMPIIQPAELWQRS-GRWDDYGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +  L+D   +  +L  
Sbjct: 93  MMKLKDRHNRDFTLGP 108



 Score = 41.4 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 42/141 (29%), Gaps = 6/141 (4%)

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA--LKSLESSTNNIKEMGPVLITTMD 384
           S     +Y     + K   +   G+ I  +   +   L   +            +   + 
Sbjct: 417 SDSMDVKYMDKDGKMKSFIMGCYGWGISRTLGAIVEQLHDDDGIIWPRSVAPYEVDIVVV 476

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
                    +     L   G+   +    + + G + K AD    P+ I  G      G 
Sbjct: 477 GKEKEKEFSEKLYSYLLDKGVDVIID-DRNVSPGVKFKDADLIGFPIRITVGRK-LKEGK 534

Query: 445 LQIKDLAKGKELSREIKNNES 465
           ++IK   +GKE      N E 
Sbjct: 535 VEIK--ERGKEAILVDANMEQ 553


>gi|262276783|ref|ZP_06054576.1| ATP phosphoribosyltransferase regulatory subunit [alpha
           proteobacterium HIMB114]
 gi|262223886|gb|EEY74345.1| ATP phosphoribosyltransferase regulatory subunit [alpha
           proteobacterium HIMB114]
          Length = 354

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 90/251 (35%), Gaps = 14/251 (5%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRY 85
           +  I   I NI++  GF+ I+  ++  +D L +   +     K   + +D  G+ ISLR 
Sbjct: 11  KENISKKILNIFKKKGFNFIDLDIVIDTDLLAQRSGEA--FKKYALNFKDKSGKEISLRP 68

Query: 86  DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA 145
           DLT   A    +         +    G  FR  K G  +         D +G     + +
Sbjct: 69  DLTIATAIQYIQRKKKGTE--KLSYFGSAFRLNKKGDLK-------VFDQIGCEIINSKS 119

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD- 204
               ++  T+ +V  K     I +N+  + D ++  + L    KL       R     + 
Sbjct: 120 SPEYLILSTVLSVFNKFKKKQIILNHIGLFDNLINSLNLPERWKLRLIRHYSRKEYFEEL 179

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI--DIMVSFLSIDLEKSMHELYELVKGT 262
              L     L  E    +         L +++I     V+ +    EK + +  +   G+
Sbjct: 180 LNRLDTNYDLDNEKIKIDYNRLGVLKKLDADKIIGGRKVAEIIERFEKKIKDPRDNFNGS 239

Query: 263 IAGEKGFNELV 273
            + +   + L 
Sbjct: 240 RSVKIIKDFLK 250


>gi|259047194|ref|ZP_05737595.1| threonine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036244|gb|EEW37499.1| threonine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 647

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/468 (8%), Positives = 114/468 (24%), Gaps = 79/468 (16%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++                      
Sbjct: 259 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPVMADVGLYKTSG------------ 306

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                     + + +            +
Sbjct: 307 -----------------------------------------HWAHYQEDMFPPMDMGDGE 325

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  +          +      +   + I+  +            G++ +    G     +
Sbjct: 326 LLVLRPMNCPHHMMVYKNHIHSYRELPIRIAEL-----------GMMHRYEKSGALSGLQ 374

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+  +   D         +K    +   D   +     N+  +    +      D  K  
Sbjct: 375 RVREMTLNDGHTFVRPDQIKDEF-KRILDLIREVYSDFNV-KDYRFRLSYRDPEDKHKYF 432

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    E     G  +          R        +    L 
Sbjct: 433 DDDEMWNKAETMLKEAMDEM--GLEYFEAIGEAAFYGPKLDIQFRTAMGLEETMSTIQLD 490

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +        V          +   +  +   +     S     +   ++  + +    
Sbjct: 491 FLLPERFDLTYVG---------EDGDNTHRPVVIHRGVVSTAERFVAYLIEEYKGAFPTW 541

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  I  +  +       +   + +   G+R E+    ++  G +++ +  +  P  
Sbjct: 542 LAPVQATIIPVSVEH-HYDAARELKEKMARLGMRVELD-DRNEKMGYKIRASQTQKIPYQ 599

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++     +  S  I+    + +  +A  + P+ +
Sbjct: 600 LVIGDKEVEEGTVTVRRYGSKETKSMSIEAYLEYVQREIANFSRPLED 647


>gi|304317243|ref|YP_003852388.1| threonyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778745|gb|ADL69304.1| threonyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 634

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 1/105 (0%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     +A+ +   +      + PV +  +      L+  Q   Q L    IR E+
Sbjct: 509 RVVFGSIERFIAILTENFAGAFPTWLAPVQVRILPISDKHLAYAQNIQQRLLENDIRVEL 568

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
               ++  G +++ A  +  P  +I G  E   G + ++    G 
Sbjct: 569 D-DRNEKIGYKIREAQMQKIPYMLILGDKEVESGNVSVRSRKDGD 612



 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +   G+  I+TP++   +   +     D   + ++  
Sbjct: 260 GFPFFHPKGMVIRNILEDFWRKEHAKRGYLEIKTPIILNEELWHRS-GHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 318 TKIDGEDYAIKPMNCPG 334


>gi|51597293|ref|YP_071484.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|186896398|ref|YP_001873510.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|81825738|sp|Q667L4|SYP_YERPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701360|sp|B2JZ09|SYP_YERPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|51590575|emb|CAH22216.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|186699424|gb|ACC90053.1| prolyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 572

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR+ GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYTTLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K+   G++   +      +  +++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIVEFLLSQIK 571


>gi|269119306|ref|YP_003307483.1| prolyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613184|gb|ACZ07552.1| prolyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 571

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 43/493 (8%), Positives = 127/493 (25%), Gaps = 28/493 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G         R+  ++ + +R   +  G   +  P+L+ +D L K        
Sbjct: 31  MIKRLASGVYSYLPLGNRVLKKVENIVREEMDKSGAQEVFMPVLQPAD-LWKESGRWIAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +  +L     ++   + R    ++  +       +             
Sbjct: 90  GPELMRMKDRHEREFALGPTHEEVVTDIVRNEINSYKDLPMNLYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F             S +     M     +     G+   D+     +   + G +
Sbjct: 150 MRGREFIMKDAYSFHTTHESLDEEYLNMKTTYENIFTRCGL---DFRAVEADSGSIGGDV 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +   +   + ++   + D          K    E   +            +  I+ 
Sbjct: 207 THEFMVLAESGEDDVLYCDSCDYAANKEKATSKADFKESDEEAKSIELVETP-NTWTIED 265

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           + +F +I   K++  +          +     +    E+      N     +   ++   
Sbjct: 266 VAAFFNIPTSKTVKAIVLKEAFGENDKYYMALIRGDYEVNTIKVKNLVNAAVELEMINDS 325

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG-GRYDGLVSRFKGQNVPATGFSIGISRL 358
           +     + +  +G   +N +   +V          +    ++     + +          
Sbjct: 326 DMEKLNLVKGFIGPVGLNNENIKIVMDESVKFMKNFTLGPNKKDHHYINSNISDFKYDMT 385

Query: 359 IVALKSLESSTNNIKEMG-----PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG- 412
               ++ E                + +  +       S+      +L   G +A + +G 
Sbjct: 386 GDIREAKEGEKCPRCGGTLKIARGIEVGHIFELGTKYSEAMK-ANVLDENGKQATLKMGC 444

Query: 413 SSKNFGNQLKYA-----DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
                   +  A     D       +     E     + I ++    ++       +  +
Sbjct: 445 YGIGVSRIMSAAIEQNYDENGIIWPVNIAPYEVD---VIIPNIKDKDQVRVAEDVYQLLK 501

Query: 468 EARVAQITIPISE 480
           +  +  I     E
Sbjct: 502 DHNIDVILDDRDE 514



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 4/104 (3%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYAD 425
               NI      +I     D D +   +   Q+L+   I   +     +  F    K AD
Sbjct: 467 IWPVNIAPYEVDVIIPNIKDKDQVRVAEDVYQLLKDHNIDVILDDRDERAGFK--FKDAD 524

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               P+ II G    + G +++KD   G     EI     + + 
Sbjct: 525 LIGFPMKIITGKS-IAEGKVEVKDRKTGNTEIVEIGTLLDYVKN 567


>gi|307705352|ref|ZP_07642214.1| threonyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307621139|gb|EFO00214.1| threonyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 647

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 97/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NL +E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYGDFNL-NEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + +      A +A
Sbjct: 619 GQKETQTVLVDDFVQAILADIA 640



 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|78222566|ref|YP_384313.1| prolyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|114152198|sp|Q39VY6|SYP_GEOMG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78193821|gb|ABB31588.1| Prolyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 570

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 49/162 (30%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R   ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLAAGIYNYLPLGLRSIRKVEQIVREEMNRAGAIELLMPSVQPAE-LWQESKRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +   +D       L     ++   L R       +    +      +R     R   
Sbjct: 90  GKELLRFKDRKDAEFCLGPTHEEVITDLVRREVKSYRQLPLNLYQVQSKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F        D    +A+T+  +M        +  G+K
Sbjct: 150 MRGREFIMKDAYSFDVSSEAADTSYDKMYQAYRRIFQRCGLK 191



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 1/99 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++      D++ ++      + L   G+         +  G++ K AD 
Sbjct: 461 IFPIPIAPFHCIISAVSTKDAEVVAACDELYRALTAVGVEVLFDDRDER-PGSKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              PL I+ G+   + G +++K    G+     +     
Sbjct: 520 IGIPLRIVVGSKNLAEGKVELKSRKGGEVSLLPLAEAVE 558


>gi|315444957|ref|YP_004077836.1| prolyl-tRNA synthetase, family II [Mycobacterium sp. Spyr1]
 gi|315263260|gb|ADU00002.1| prolyl-tRNA synthetase, family II [Mycobacterium sp. Spyr1]
          Length = 584

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 2/113 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +   + D+++ +        L  AG    +    + + G + K
Sbjct: 473 DELGLRWPGSVAPFAVHVVIANKDAEARAGATELATALDRAGADVLLD-DRTASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            A+    P  ++ G    + G+++++D   G++    +  + +  E  +A IT
Sbjct: 532 DAELLGVPWIVVVG-RGWADGVVELRDRFSGEKREIPVGPDTTAAEQILAAIT 583



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  +I   +R+  +  G   I  P L      ++  ++    D     +
Sbjct: 36  GLYSWLPLGLKVLRKIEHIVRSEMDAIGGQEILFPALLPRAPYETTNRWTEYGDT----L 91

Query: 71  FSLQDDDGQWISLRY 85
           F LQD       L  
Sbjct: 92  FRLQDRRDNDYLLGP 106


>gi|145224625|ref|YP_001135303.1| prolyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|145217111|gb|ABP46515.1| prolyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 588

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 2/113 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +   + D+++ +        L  AG    +    + + G + K
Sbjct: 477 DELGLRWPGSVAPFAVHVVIANKDAEARAGATELATALDRAGADVLLD-DRTASPGVKFK 535

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            A+    P  ++ G    + G+++++D   G++    +  + +  E  +A IT
Sbjct: 536 DAELLGVPWIVVVG-RGWADGVVELRDRFSGEKREIPVGPDTTAAEQILAAIT 587



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  +I   +R+  +  G   I  P L      ++  ++    D     +
Sbjct: 40  GLYSWLPLGLKVLRKIEHIVRSEMDAIGGQEILFPALLPRAPYETTNRWTEYGDT----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD       L  
Sbjct: 96  FRLQDRRDNDYLLGP 110


>gi|238792729|ref|ZP_04636360.1| Prolyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727837|gb|EEQ19360.1| Prolyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 572

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR+ GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K+   G++   +      +   ++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIIDFLLGQIK 571


>gi|306829065|ref|ZP_07462255.1| threonine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428151|gb|EFM31241.1| threonine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 647

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/382 (12%), Positives = 98/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDCGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + +      A +A
Sbjct: 619 GQKETQTVSVDDFVQAILADIA 640



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|125718378|ref|YP_001035511.1| threonyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166225508|sp|A3CP56|SYT_STRSV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125498295|gb|ABN44961.1| Threonyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 647

 Score = 63.7 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/380 (11%), Positives = 97/380 (25%), Gaps = 18/380 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDFFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++   +
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVRRYGQ 620

Query: 453 GKELSREIKNNESWREARVA 472
            +  +  +        A +A
Sbjct: 621 KETHTVAVDEFVEQILADIA 640



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|150403333|ref|YP_001330627.1| threonyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166223356|sp|A6VJ50|SYT_METM7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150034363|gb|ABR66476.1| threonyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 622

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 45/157 (28%), Gaps = 20/157 (12%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKS------LESSTNNIKEMGPVLITTMDHDSD 388
                +     +  +        L   L++                + P+    +     
Sbjct: 455 HDGDKKVHPIILHCSPTGSVERVLCGLLENAYLNTLENKPPALPTWLTPIQARVIPVGDK 514

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                      LR +GIRA+       + G +++ A        ++ G  E   G L + 
Sbjct: 515 HEEFALEVANKLRASGIRADFDDRED-SMGKKVRNAGTDWVNYVVVIGDNEMETGKLTV- 572

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                      I+     ++A+   +T+   EL+  +
Sbjct: 573 ----------TIREESELKKAKKEALTV--EELIEKI 597


>gi|315612715|ref|ZP_07887626.1| threonine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314825|gb|EFU62866.1| threonine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 647

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/382 (12%), Positives = 98/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDCGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + +      A +A
Sbjct: 619 GQKETQTVSVDDFVQAILADIA 640



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|118444060|ref|YP_877833.1| threonyl-tRNA synthetase [Clostridium novyi NT]
 gi|166223336|sp|A0PZN1|SYT_CLONN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118134516|gb|ABK61560.1| threonyl-tRNA synthetase [Clostridium novyi NT]
          Length = 637

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++E  G+  I TP++  ++ L       D   + ++  
Sbjct: 261 GFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPII-LNEKLWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 319 TKIDGEDYAIKPMNCPG 335



 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 87/262 (33%), Gaps = 7/262 (2%)

Query: 217 EGRTDNSGDFTKGANLTSE---QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
               D++  F     +TSE    I ++ +F S+   +   EL    + ++  ++ +    
Sbjct: 377 NFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGFEYFVELSTRPEDSMGSDEDWE--A 434

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
             + L++         KI+                  LG        +            
Sbjct: 435 ATNGLIKALNEAGLEYKINEGDGAFYGPKIDFHLRDCLGRTWQCGTIQLDFQMPERFDLS 494

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y G         +        I R I  L    +       + PV +  M+   + +   
Sbjct: 495 YVGADGEKHRPVMAHRVIFGSIERFIGILTEHYAGAFP-TWLAPVQVKIMNITDNQVEYC 553

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   ++L   GIR E+ L  ++  G +++ A  +  P  ++ G  E +   + ++   +G
Sbjct: 554 KEIQKVLNENGIRVELDL-RNEKIGYKIREAQLQKIPYMLVLGDKEMNEKTIAVRARKQG 612

Query: 454 KELSREIKNNESWREARVAQIT 475
              +  + +  +  +  + + T
Sbjct: 613 DLGAMNLTDFVAMVKKEIEEKT 634


>gi|303258207|ref|ZP_07344214.1| proline--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302858960|gb|EFL82044.1| proline--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 582

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 48/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R   +I   +R   +  G   +  P+++ ++ L +      + 
Sbjct: 31  MIRKLAAGVYNYMPMGLRSLKKIERIVREEMDRAGAIELLMPIVQPAE-LWQETGRWQKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +   +D   +   L+    ++   +AR   +++  +       +             
Sbjct: 90  GAELLRFKDRHDRDFVLQPTSEEVVTDIARQEIKSWRQLPVNFYQIQTKFRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D     A  +  +M        + +G
Sbjct: 150 MRGRDFVMKDAYSFDRTAEDAGKSYDKMFDAYCRIFDRLG 189



 Score = 41.4 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 32/130 (24%), Gaps = 21/130 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V+I  + +D   +           LR AGI   +        G  
Sbjct: 470 DDKGIIWPDSIAPFTVVICPVGYDKSEEVQKASNELYGRLREAGIDVILD-DRGLRPGVM 528

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  +  G      G +                  E      +    +P+SE
Sbjct: 529 FADWELIGVPHRVTIGDRGLKNGEV------------------EYAHRGDLQNENVPVSE 570

Query: 481 LVSTVKKILQ 490
           +   +   ++
Sbjct: 571 IADKLIAKIK 580


>gi|168188008|ref|ZP_02622643.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294168|gb|EDS76301.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 637

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++E  G+  I TP++  ++ L       D   + ++  
Sbjct: 261 GFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPII-LNEKLWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 319 TKIDGEDYAIKPMNCPG 335



 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 76/259 (29%), Gaps = 3/259 (1%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
               D++  F     +TSE + ++    +           EL            E    +
Sbjct: 377 NFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGFEYFVELSTRPEDSMGSDEEWEAAT 436

Query: 277 ELV-RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             + +         KI+                  LG        +            Y 
Sbjct: 437 NGLVKALNEAGLEYKINEGDGAFYGPKIDFHLRDCLGRTWQCGTIQLDFQMPERFDLSYV 496

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G         +        I R I  L    +       + PV +  M+   + +   + 
Sbjct: 497 GPDGEKHRPVMAHRVIFGSIERFIGILTEHYAGAFP-TWLAPVQVKIMNITDNQVEYCKE 555

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             + L  +GIR E+ L  ++  G +++ A  +  P  ++ G  E +   + ++   +G  
Sbjct: 556 IQKALNESGIRVELDL-RNEKIGYKIREAQLQKIPYMLVLGDKEMNENTIAVRARKQGDL 614

Query: 456 LSREIKNNESWREARVAQI 474
            + ++ +  +     + + 
Sbjct: 615 GAMKLDDFIAMVRKEIDEK 633


>gi|331269136|ref|YP_004395628.1| threonyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125686|gb|AEB75631.1| threonyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 637

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++E  G+  I TP++  ++ L       D   + ++  
Sbjct: 261 GFPFFYPKGMILRNTLENYWREMHEKAGYGEIRTPII-LNEKLWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 319 TKIDGEDYAIKPMNCPG 335



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 86/262 (32%), Gaps = 7/262 (2%)

Query: 217 EGRTDNSGDFTKGANLTSE---QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
               D++  F     +TSE    I ++ +F  +   +   EL    + ++  ++ + +  
Sbjct: 377 NFTQDDAHIFMTKEQITSEILGVIKMIDNFYGLFGFEYFVELSTRPEDSMGSDEDWEDAT 436

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
                V+         KI+                  LG        +            
Sbjct: 437 NGL--VKALNEAGLEYKINEGDGAFYGPKIDFHLRDCLGRTWQCGTIQLDFQMPERFDLS 494

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y G         +        I R I  L    +       + PV +  M+   + +   
Sbjct: 495 YVGADGEKHRPVMAHRVIFGSIERFIGILTEHYAGAFP-TWLAPVQVKIMNITDNQVEYC 553

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + L+  GIR E+ L  ++  G +++ A  +  P  ++ G  E +   + ++   +G
Sbjct: 554 KEIEKTLKENGIRVELDL-RNEKIGYKIREAQLQKIPYMLVLGDKEMNENTIAVRSRKQG 612

Query: 454 KELSREIKNNESWREARVAQIT 475
              + ++ +  +  +  V + T
Sbjct: 613 DLGAMQLVDFVAMVKKEVQEKT 634


>gi|300938604|ref|ZP_07153336.1| prolyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|331645338|ref|ZP_08346449.1| proline--tRNA ligase [Escherichia coli M605]
 gi|281177420|dbj|BAI53750.1| prolyl-tRNA synthetase [Escherichia coli SE15]
 gi|300456450|gb|EFK19943.1| prolyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|330910045|gb|EGH38555.1| prolyl-tRNA synthetase [Escherichia coli AA86]
 gi|331046095|gb|EGI18214.1| proline--tRNA ligase [Escherichia coli M605]
          Length = 572

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQIK 571


>gi|183602502|ref|ZP_02963867.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683545|ref|YP_002469928.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|254782886|sp|B8DTM3|SYP_BIFA0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183218143|gb|EDT88789.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621195|gb|ACL29352.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 599

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 8/116 (6%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D  +    +     L   GI          + G + K
Sbjct: 486 DDKGLAWPMNIAPAQVHVMATGKDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGVKFK 545

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            A+    P+  + G    + G ++++D        R+  N+E+     VAQ+ +  
Sbjct: 546 DAELIGVPIIAVAGRDTVNNGTIEVRD--------RDGSNSENISVDSVAQVIVDR 593



 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                + + N+I D IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 40  WLPLGLAVLNKIEDVIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 95

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 96  DRHEADYLLAP 106


>gi|114656308|ref|XP_001139993.1| PREDICTED: similar to GCN2beta isoform 2 [Pan troglodytes]
          Length = 1592

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 25/174 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1061 AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1107

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1108 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1164

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGD 187
             S+  +      ++                           L  IL   G+  D
Sbjct: 1165 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPED 1218



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 19/196 (9%)

Query: 301  YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLI 359
            Y        I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I
Sbjct: 1262 YKVQQHNGIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAI 1321

Query: 360  VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
              + +   +      +    +  +     S+S+    TQ L TAGI AE+    S++   
Sbjct: 1322 DKISAAVLNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEE 1381

Query: 420  QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
              +Y          +    E S   +++K   K ++  +                 +  +
Sbjct: 1382 LQEYCRHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLET 1423

Query: 480  ELVSTVKKILQENKEE 495
            ELV  V + L+    +
Sbjct: 1424 ELVDHVLQKLRTKVTD 1439


>gi|324993844|gb|EGC25763.1| threonine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324994835|gb|EGC26748.1| threonine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|325687276|gb|EGD29298.1| threonine--tRNA ligase [Streptococcus sanguinis SK72]
 gi|325696135|gb|EGD38026.1| threonine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327474719|gb|EGF20124.1| threonine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 647

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/400 (11%), Positives = 100/400 (25%), Gaps = 36/400 (9%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++    
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEAEDGTVNVR---- 616

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                         R  +    TIP+ E V  +   +   
Sbjct: 617 --------------RYGQKETHTIPVDEFVEQILADIASK 642



 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|312134482|ref|YP_004001820.1| prolyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774533|gb|ADQ04020.1| prolyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 572

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 3/167 (1%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +G       +    FG V    + +  +       +     +  I   +   +    
Sbjct: 403 GIEVGHIFKLGTKYTEAFGCVYTDEKGEKKLMIMGCYGIGINRTAAAIIEQMHD-EDGII 461

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +     +++     D +         + L+  GI   +     +  G + K AD  
Sbjct: 462 WPITVAPYEVIVVPVNIKDENQHKIAFEIYENLQKNGIEVLIDDRDERA-GVKFKDADLI 520

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             P  +  G    S G L+I++    +    EI N   +    + Q 
Sbjct: 521 GIPFRVTVGKK-VSEGKLEIRNRRTKETFEVEIDNAVEFIMNLIKQE 566



 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         R+  +I + +R   +  G   +    L   + L +  
Sbjct: 26  MLRSGFMR-QLSSGIYVYLPLGYRVLRKIENIVREEMDRSGAQELHMSALMPKE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
                    +F ++D + +   L  
Sbjct: 84  GRWAVFGPEMFRIKDRNEREYCLGP 108


>gi|297696292|ref|XP_002825340.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
            factor 2-alpha kinase 4-like [Pongo abelii]
          Length = 1575

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 25/174 (14%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS------LQDD 76
             +++  + ++I  I++ +G   + TPLL     L +        N+ ++         D 
Sbjct: 1044 AKMQQHVCETIIRIFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAALFMDH 1090

Query: 77   DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             G  + L +DL  P ARYVA N    +   + Y I  VFR  K      ++ ++C  D V
Sbjct: 1091 SGMLVMLPFDLRIPFARYVARNN---ILNLKRYCIERVFRPRKLDRFHPKELLECAFDIV 1147

Query: 137  GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI---LDGILEKIGLHGD 187
             S+  +      ++                           L  IL   G+  D
Sbjct: 1148 TSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPED 1201



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 19/196 (9%)

Query: 301  YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLI 359
            Y        I  F    ++++  V   +  GGRYD L+ +F+G         +IG+S  I
Sbjct: 1245 YKVQQHNGIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAI 1304

Query: 360  VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
              + +   +      +    +  +     S+S+    TQ L TAGI AE+    S++   
Sbjct: 1305 DKISAAVLNMEEPVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEE 1364

Query: 420  QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
              +Y          +    E S   +++K   K ++  +                 +  +
Sbjct: 1365 LQEYCRHHEITYVALVSDKEGS--HVKVKSFEKERQTEKR----------------VLET 1406

Query: 480  ELVSTVKKILQENKEE 495
            ELV  V + L+    +
Sbjct: 1407 ELVDHVLQKLRTKVGD 1422


>gi|297571190|ref|YP_003696964.1| prolyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931537|gb|ADH92345.1| prolyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 595

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 5/102 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D         +   L   G   E+           +K
Sbjct: 484 DDKGLAWPAHLAPATVHVIATGKDDAVFDTASRFAAELSEQG--VEVIYDDRVKVSAGVK 541

Query: 423 YAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           +AD      P AI+ G      G ++I+D   G+ +   + +
Sbjct: 542 FADYELIGVPFAIVVG-RGLKDGKVEIRDRRSGENVEVPVGD 582



 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 41/156 (26%), Gaps = 14/156 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  ++   +R   +  G   +  P L   E  ++  +     +     +
Sbjct: 36  GIYTWLPLGLKVLRKVEAVVREEMDAAGSQEMHFPALLPREPYEATNR----WEEYGPNL 91

Query: 71  FSLQDDDGQWISLRY----DLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGPG 123
           F L+D       L        T  +    +   D   ++      YR     R       
Sbjct: 92  FRLKDRRENDYLLAPTHEEMFTLAVKDMYSSYKDLPVSLYQIQHKYRDEARPRAGIIRTR 151

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
            F        D   S  + +   M          +G
Sbjct: 152 EFIMKDAYSFDIDDSGLDHSYETMRNAYQRIFTRLG 187


>gi|218698853|ref|YP_002406482.1| prolyl-tRNA synthetase [Escherichia coli IAI39]
 gi|226701079|sp|B7NKX8|SYP_ECO7I RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218368839|emb|CAR16587.1| prolyl-tRNA synthetase [Escherichia coli IAI39]
          Length = 572

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQIK 571


>gi|123443459|ref|YP_001007432.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332160618|ref|YP_004297195.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|152112962|sp|A1JP53|SYP_YERE8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|122090420|emb|CAL13288.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318606904|emb|CBY28402.1| prolyl-tRNA synthetase; Bacterial type [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325664848|gb|ADZ41492.1| prolyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330860908|emb|CBX71188.1| prolyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 572

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ--MYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       +         LR+ GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYATLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K+   G++   +      +  +++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKTSEIIDFLLSQIK 571


>gi|119470323|ref|ZP_01613082.1| prolyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446495|gb|EAW27770.1| prolyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 574

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 14/160 (8%), Positives = 40/160 (25%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   +  G        +R+  ++ + +R   +  G   +  P+++ +D L +        
Sbjct: 31  MIRRVASGLYTWLPSGLRVLRKVENIVREEMDKAGAIEMLMPVIQPAD-LWEESGRWSEF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +    D   +  +L     ++     R    ++  +       +             
Sbjct: 90  GPELMRFTDRHNREFALGPTHEEVITDFVRKEVNSYKQLPLTLYQVQTKVRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F                     M     +  E +G
Sbjct: 150 MRAREFTMKDAYSFHLSEECLNNTYQAMHKAYCNIFERLG 189



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                Q L+ AG+   +F    +  G      +    P  ++ G        +++K+   
Sbjct: 495 ANSLYQGLKDAGVDV-LFDDRKERPGVMFNDMELVGVPFTLVIGERNLDENKVELKNRRT 553

Query: 453 GKELSREIKNNESWREARVA 472
           G++L  +I       +A + 
Sbjct: 554 GEKLMIDIDTAIESIKAAMQ 573


>gi|241190576|ref|YP_002967970.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195982|ref|YP_002969537.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|240248968|gb|ACS45908.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250536|gb|ACS47475.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295793563|gb|ADG33098.1| prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 605

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 8/116 (6%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D  +    +     L   GI          + G + K
Sbjct: 492 DDKGLAWPMNIAPAQVHVMATGKDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGVKFK 551

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            A+    P+  + G    + G ++++D        R+  N+E+     VAQ+ +  
Sbjct: 552 DAELIGVPIIAVAGRDTVNNGTIEVRD--------RDGSNSENISVDSVAQVIVDR 599



 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                + + N+I D IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 46  WLPLGLAVLNKIEDVIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 101

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 102 DRHEADYLLAP 112


>gi|158334707|ref|YP_001515879.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158304948|gb|ABW26565.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 606

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 77/242 (31%), Gaps = 17/242 (7%)

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL-VVISELVRKSGYNSNRIK 290
           L  +     +SF   D +K +       K   A  +    L +   E + ++ +   ++ 
Sbjct: 376 LQLKNFKARLSFRDPDSDKYIGSDEAWEKSQNAIRRAVETLGMEHFEGIGEAAFYGPKLD 435

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                V   E+  G V         + E+      G  G   R            +    
Sbjct: 436 FIFQDVLDREWQLGTVQVDY----NLPERFDLEFMGEDGNRQR---------PIMIHRAP 482

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F      + + ++              V + T++   D +   Q     L+ AGIR  + 
Sbjct: 483 FGSLERLIGILIEEYAGVFPLWLAPEQVRLLTVN--DDHMPFAQAVATDLQAAGIRVSVD 540

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +  G +++ A++   P+  + G  E     L I+  A G+  +  +   +      
Sbjct: 541 QSGDR-LGKKIRNAEKAKIPVMSVIGDKEVEAHSLNIRTRASGELGAIPVDEVKQKLGDA 599

Query: 471 VA 472
           ++
Sbjct: 600 IS 601



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+++ D ++      G+  + TP +   D   K      +  + +F L
Sbjct: 220 GLPLWTPKGTLLRSQLEDFLKQEQIQRGYLGVTTPHIARVDLF-KTSGHWQKYQEDMFPL 278

Query: 74  QDDDG 78
             ++ 
Sbjct: 279 MSEND 283


>gi|289178315|gb|ADC85561.1| Prolyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 615

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 8/116 (6%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D  +    +     L   GI          + G + K
Sbjct: 502 DDKGLAWPMNIAPAQVHVMATGKDEAAFEAAERLVDELSANGIEVLYDDRRKVSPGVKFK 561

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            A+    P+  + G    + G ++++D        R+  N+E+     VAQ+ +  
Sbjct: 562 DAELIGVPIIAVAGRDTVNNGTIEVRD--------RDGSNSENISVDSVAQVIVDR 609



 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                + + N+I D IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 56  WLPLGLAVLNKIEDVIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 111

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 112 DRHEADYLLAP 122


>gi|320529200|ref|ZP_08030292.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138830|gb|EFW30720.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 639

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN +L+  R ++  YG+  I TP++  S  L +         + +++ 
Sbjct: 263 GFPFFHPNGMILRNELLNYWREVHRRYGYSEISTPVI-LSRKLWETSGHWFHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLA 92
           Q  D +  +++        
Sbjct: 322 QI-DEEDYAIKPMNCPGCM 339



 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 41/102 (40%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +          +   + +   GIR E+   + K  G +++ +  +  P  +
Sbjct: 536 WMTPVQVRILPITERHAEYAEELRKRMFDRGIRVEVDNRNEKT-GYKIRESQVKKTPYTL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E+  G + ++   +         +  ++ E ++A+ +
Sbjct: 595 VVGDQEQESGTVALRKYGEKDSTVMSADDFIAFVEKKIAERS 636


>gi|237749841|ref|ZP_04580321.1| ATP phosphoribosyltransferase regulatory subunit [Helicobacter
           bilis ATCC 43879]
 gi|229374591|gb|EEO24982.1| ATP phosphoribosyltransferase regulatory subunit [Helicobacter
           bilis ATCC 43879]
          Length = 284

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 48/130 (36%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+P G          ++ ++ +   N++  +GF+ I +P   Y +        +   
Sbjct: 3   LEHEIPEGSKLHFGLSAALKRKVENLSVNLFYKHGFEEIVSPTFVYQE------HQKSFL 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           N+ V  L  +    I++R D T  + R + +         + + I PVF        +  
Sbjct: 57  NRDVIQLSSEKNHQIAMRNDSTIDVVRIITKRLGRSTTQKKWFYIQPVFSYPTIEHNQIG 116

Query: 127 QFIQCDVDNV 136
                + + +
Sbjct: 117 VECLDESEYL 126


>gi|330814001|ref|YP_004358240.1| prolyl-tRNA synthetase Bacterial type [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487096|gb|AEA81501.1| prolyl-tRNA synthetase Bacterial type [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 441

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 59/488 (12%), Positives = 126/488 (25%), Gaps = 86/488 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   +R+     G   +  P ++ +D L K     D  
Sbjct: 31  MIRQSASGIYSWLPLGFKVLKKIESIVRDEQNKAGAQEMLMPTIQSAD-LWKESGRYDGY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       +L   + R   + + ++             + +     
Sbjct: 90  GLEMLRIRDRQDRELLYGPTNEELITQIFRDNVKTYKSLPLILY------HIQWKFRDEI 143

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R R  I    + +   + +                    N     I+  K+    L+   
Sbjct: 144 RPRFGIMRCREFLMKDSYS-----------------FDENKEGAIISYNKMFCAYLKTFE 186

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI---DIM 240
             G   +                    +    G    D S +F   A+    QI     +
Sbjct: 187 RLGLRAI-------------------PMAADTGPIGGDLSHEFIILADTGESQIFTSKKI 227

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +     D +     L ++VK         +E    S+  +        +     +     
Sbjct: 228 LDLKISDFKNDSESLAKMVKSYTDIYSATDEKFNQSDFDKSVEKKDQLVTRGIEVGHIFY 287

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           +                 K   +  GS G G                   +   ++   V
Sbjct: 288 FGDKYSKPMKALVNSSEGKNITIEMGSYGIGVSRLAGAIIEANYKDNVMKWPASVTPFHV 347

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           A+  L                    D     K     + L        +   + ++  ++
Sbjct: 348 AVIYLGKKN----------------DETLKKKTSDVYEKLLNNSFEVLLD-DTDESPASK 390

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            K  D    P  II G   +S    + K+L  G+E                    I +  
Sbjct: 391 FKNFDLIGIPYQIIIGAK-QSGDEFEFKEL--GEEKEI-----------------INLDI 430

Query: 481 LVSTVKKI 488
           +++ +KKI
Sbjct: 431 IINKLKKI 438


>gi|288574759|ref|ZP_06393116.1| threonyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570500|gb|EFC92057.1| threonyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 630

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 40/99 (40%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D +   +    +L+    R E+     +  G +++ A     P  +
Sbjct: 531 WIAPVQVKVLAVGDDHVDYAKDLKALLQDREYRVELD-CRDEKLGRKIRDAQMEKVPFML 589

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E   G + ++D ++G + S   ++     + + +
Sbjct: 590 VVGDKELETGTVSVRDRSEGDKGSMSKEDLLELLKGQFS 628



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + + N ++D    ++   G+D I TP++   D   +     D   + ++  
Sbjct: 257 GFPFFHPKGMVVINTLIDFWSKVHRKNGYDQIRTPMILNRDLWIQS-GHWDHYRENMY-F 314

Query: 74  QDDDGQWISLRYDLTAP 90
            + D Q  +++      
Sbjct: 315 TEIDDQPYAIKPMNCPG 331


>gi|220924792|ref|YP_002500094.1| ATP phosphoribosyltransferase regulatory subunit [Methylobacterium
           nodulans ORS 2060]
 gi|219949399|gb|ACL59791.1| tRNA synthetase class II (G H P and S) [Methylobacterium nodulans
           ORS 2060]
          Length = 379

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 130/377 (34%), Gaps = 64/377 (16%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           + +   +E  G+  +E P+L+  +   +   ++ R  + +F  QD  G  + LR + T P
Sbjct: 16  ERLLAFFEGRGYARVEPPVLQPVEPFLELSGEDIR--RRIFITQDAGGAELCLRPEYTIP 73

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
           + R+                +GPVFR     P  F Q     +  V   A  A  E+  +
Sbjct: 74  VGRH--HRAVAGSAAADYSYLGPVFRLRAAEPDEFHQAGIESIGRVEIPAVDA--EILGL 129

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL--RAIDKL----- 203
             + LE +G  R D  + + +  ++  +L+ +G+    K      +   R++D L     
Sbjct: 130 AVEGLERLG--RRDLQVRLGDMGLITALLDALGVAPAAKRRCLRAIAAGRSLDDLVAPAP 187

Query: 204 ------------DKFGLQGVKLLLGE---------------------GRTDNSGDFTKGA 230
                            QGV+  + +                          +     GA
Sbjct: 188 VGEAHAGLLSAIQGQDPQGVRAFVEDVLAIAGISRVGGRSAGEIAERFLAKAAAHAGGGA 247

Query: 231 NLTSEQIDIMVSFL--SIDLEKSMHELYELVKG----TIAGEKGFNELVVISELVRKSGY 284
            L SE   ++ ++L  + D +++   + EL+        A  +        +  +   G 
Sbjct: 248 GLGSETRAVIEAYLAVTGDPDQAAAAVRELIGSAGLAAPALREALALFEERNGFIAARGL 307

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
             +R   +    R L+YYTG ++E            +      V GGGRYDGL+      
Sbjct: 308 PLDRFTFTGRFARNLDYYTGFIFEI----------AEAEGERPVVGGGRYDGLLQHLGSP 357

Query: 345 NVPATGFSIGISRLIVA 361
                         + A
Sbjct: 358 EPLPAVGCSFWLDRLAA 374


>gi|158321007|ref|YP_001513514.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141206|gb|ABW19518.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 636

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/272 (12%), Positives = 75/272 (27%), Gaps = 17/272 (6%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
               D++  F     +  E I I+     +          EL            E  +  
Sbjct: 379 NFTQDDAHLFVLPEQIKEEIIGIIDFVDYVYNIFGFKYHIELSTRPENSMGTDEEWELAI 438

Query: 277 ELVR-KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             ++          KI+               E  +G        +            Y 
Sbjct: 439 GSLKGALDEKELSYKINEGDGAFYGPKIDFHLEDCIGRTWQCGTIQLDFQMPQRFDMNYV 498

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G         +        + R I  L    +       + P+ +  +            
Sbjct: 499 GADGENHRPIMLHRVIFGSVERFIAILIEHYAGKFP-AWLAPIQVQILPIADKHHEYAIK 557

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             + ++  GIR E+    ++  G +++ A     P  ++ G  E   G + ++   +G+ 
Sbjct: 558 LEREMKARGIRVEVD-SRNEKIGYKIREAQLSKVPYMLVIGDKEMEAGEVAVRSRDRGEV 616

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKK 487
            + ++++               I +LV  +K+
Sbjct: 617 GAVKVESF--------------IEDLVQEIKE 634



 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 2/92 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     + + +RN + +  R  +   G+D I+TP++  ++ L +     D   + ++  
Sbjct: 263 GFPFFHPRGMVLRNALENFWREEHVKRGYDEIKTPII-LNEKLWRQSGHWDHYQENMYFT 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFP 105
           + DDG   +++                +    
Sbjct: 322 KIDDG-DYAIKPMNCPGSILMYNRKKHSYRDF 352


>gi|322657154|gb|EFY53437.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322686289|gb|EFY82273.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
          Length = 277

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108


>gi|257874844|ref|ZP_05654497.1| predicted protein [Enterococcus casseliflavus EC20]
 gi|257809010|gb|EEV37830.1| predicted protein [Enterococcus casseliflavus EC20]
          Length = 533

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 108/290 (37%), Gaps = 36/290 (12%)

Query: 27  NRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYD 86
            ++   +R +Y  + F P  +   E   +  +   D+      + +    DG+ ++L+ D
Sbjct: 26  EQVELKLRKLYTQHHFSPYHSNNFEEYRNYQQN--DQFLRGSSIITFTGTDGRTMALKPD 83

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
           +T  +A       +T     R          +    G +++  Q  ++ +         E
Sbjct: 84  VTLSIA------KNTPSGEARRVYYVEDVYRQDRQAGEYQKIDQIGLELIDQITWEDQLE 137

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  +  ++L  VG       + +++  ILDGI ++       +                 
Sbjct: 138 VVKLAWESLAQVG----KGTLDLSHMGILDGICQRFPEADRQR----------------- 176

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIA 264
               V   L +  +      T+ A L++ + + +     LS D E    +  EL+     
Sbjct: 177 ----VLHCLRDKSSHGMDALTEKAGLSATEAEKLAKLVRLSGDFETKYQKAKELLADYPQ 232

Query: 265 GEKGFNELVVISELVRKSG-YNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
            + G  EL  + + ++K     S RI++  +I+   +YY+G +++  +  
Sbjct: 233 AQAGLAELKQLYQALQKEQLSASIRIRLDFSILNDADYYSGLLFQGFIEE 282


>gi|238751425|ref|ZP_04612917.1| Prolyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710292|gb|EEQ02518.1| Prolyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 572

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR+ GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K+   G++   +      +   ++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKTSEIIDFLLGQIK 571


>gi|289830168|ref|ZP_06547590.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
          Length = 282

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108


>gi|157828402|ref|YP_001494644.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933112|ref|YP_001649901.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166980152|sp|A8GRW1|SYP_RICRS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189083508|sp|B0BXB9|SYP_RICRO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157800883|gb|ABV76136.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908199|gb|ABY72495.1| prolyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 426

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 49/459 (10%), Positives = 127/459 (27%), Gaps = 65/459 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I + +R      G   +  P ++ +    +     D  
Sbjct: 31  MIRQQAAGIYTWLPLGLKVLKNIENIVRLNMNKAGALEVLMPCIQPAHLWMES-GRFDNY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +   QD        R+D T                                    F 
Sbjct: 90  GKEMLKFQD--------RHDNT----------------------------------LLFG 107

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              +  + ++      +  ++   +         +       +  R+ L        ++ 
Sbjct: 108 PTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINE 167

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++ +     + +A        +   + L        + +   G NL+ E   I+    + 
Sbjct: 168 ENAVKTYNQMYKAY-------INAFRDLGVFAIPVIADNGPIGGNLSHE-FHIIAE--TG 217

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +      + ++++K     +    E+               + +++   +   E  +   
Sbjct: 218 ESTIYYDKKFKILKDNPDID--VEEIKSWYAAAE------EKYEVNKLPISEQEITSSKG 269

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            E    F + ++    V   ++     Y  L               +         +   
Sbjct: 270 IEVGHIFYIGSK--YSVNMNALINDE-YGKLTPIEMSSYGIGISRLVAAIIEANCDEKGI 326

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +++      LI    HDS  +   +M  + L    I        ++  G++    D 
Sbjct: 327 IWPSSVAPFKVSLINLNIHDSKCVELAEMAYKELSDKNIEVLYDDTEAR-PGSKFATHDL 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P  II G  + +  ++++KD   G     E+ +  S
Sbjct: 386 IGSPHQIIIGPKKAANNIVELKDRKSGVIEDIEVGSLMS 424


>gi|313896316|ref|ZP_07829869.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975115|gb|EFR40577.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 639

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN +L+  R ++  YG+  I TP++  S  L +         + +++ 
Sbjct: 263 GFPFFHPNGMILRNELLNYWREVHRRYGYSEISTPVI-LSRKLWETSGHWFHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLA 92
           Q  D +  +++        
Sbjct: 322 QI-DEEDYAIKPMNCPGCM 339



 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 41/102 (40%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +          +   + +   GIR E+   + K  G +++ +  +  P  +
Sbjct: 536 WMTPVQVRILPITERHAEYAEELRKRMFDRGIRVEVDNRNEKT-GYKIRESQVKKTPYTL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E+  G + ++   +         +  ++ E ++A+ +
Sbjct: 595 VVGDQEQESGTVALRKYGEKDSTVMSADDFIAFVEKKIAERS 636


>gi|271963639|ref|YP_003337835.1| proline--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270506814|gb|ACZ85092.1| Proline--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 580

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 5/144 (3%)

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITT 382
                  + D L    K   V    + +G+SR +  L      E      +E+ PV +  
Sbjct: 430 RKYADAAKLDALGPDGKPIRVTMGSYGVGVSRAVAVLAEQRHDELGLVWPREVAPVDVHV 489

Query: 383 MDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +    D  +       + L+  G+R  +   +  + G + K A+    P  +I G    +
Sbjct: 490 VGTGKDGQIEAANRLAEDLQARGLRVLVDDRAGVSPGVKFKDAELLGMPTILIIG-RGLA 548

Query: 442 RGMLQIKDLAKGKELSREIKNNES 465
           +G+ +++D   G +    I     
Sbjct: 549 QGVAELRDRVTGVKEEIPIDEAAD 572



 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G          +   +   +R      G   +  P L   EY ++ G++    D     +
Sbjct: 40  GIYSWLPLGKMVLENVTRIVREEMNRMGGQEVLFPALLPREYYEATGRWTEYGDT----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G    L  
Sbjct: 96  FRLQDRKGADYLLGP 110


>gi|210634040|ref|ZP_03297958.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279]
 gi|210158984|gb|EEA89955.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279]
          Length = 587

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R E P GF       + ++N +LD  R I+   G+  I TP +  S  L K     D  
Sbjct: 208 MRDEAP-GFPFFLPNGMILKNTLLDYWREIHHKAGYVEISTPQIMNSQ-LWKTSGHWDHY 265

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV 103
              ++S    DG+   ++           A    +  
Sbjct: 266 KDNMYSTMI-DGEEYCIKPMNCPGGVLVYASKPHSYR 301



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 75/283 (26%), Gaps = 33/283 (11%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     LT E + ++    S+  +       EL            +      
Sbjct: 331 FNQDDAHLFVTPEQLTDEIVGVVNLITSVYDKFGFTYHLELSTRPEDSMGSDEDWERAEA 390

Query: 278 LVR-KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-D 335
            ++           ++               E  LG        +            Y D
Sbjct: 391 GLKTALERLGMEYVVNEGDGAFYGPKIDFHLEDSLGRTWQCGTVQLDFQMPQNFDLEYVD 450

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
              ++ +   +    F      + + ++              V +  +     S      
Sbjct: 451 ADGTKKRPIMLHRVCFGSIERFIGILIEHFAGKFPVWLAPMQVKVLPVS--EKSRDYAHE 508

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYA---DRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            T  L  AGIR        +  G +++ A   DR   P  +I G  E   G + ++D   
Sbjct: 509 VTAKLEAAGIRVVCD-DRDEKIGYKIREARGTDR--VPYMLILGEKEVEAGNISVRD-RT 564

Query: 453 GKELSREIKNNESWREARVAQITIP--ISELVSTVKKILQENK 493
            +                    T+P  + E ++ V++ +    
Sbjct: 565 NE--------------------TVPMGVDEFIAKVREEIDTRA 587


>gi|197119263|ref|YP_002139690.1| prolyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|226701292|sp|B5EIT9|SYP_GEOBB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|197088623|gb|ACH39894.1| prolyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 573

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 59/222 (26%), Gaps = 11/222 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R   ++   +R      G   +  P ++ ++ L K     +  
Sbjct: 31  MIRKLAAGIYNYLPFGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWKESGRWEFY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +    D       +         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRFNDRKDAEFCMGPTHEEVITDLIRKEVRSYRQLPINLYQIQGKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D   + A+ +  +M        E  G+K   +     +   + G  
Sbjct: 150 MRGREFIMKDAYSFDVNEAGADVSYEKMYKAYRRIFERCGLK---FRAVEADTGTIGGSY 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
               +   D   + ++   A +          +   G    D
Sbjct: 207 SHEFMVLADSGEDAIVSCSACEYAANMEKAETRKGEGIEHAD 248



 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQLKYAD 425
                I     ++ +    + +  +  +   Q L  AGI   +        F    K AD
Sbjct: 464 IFPIPIAPFQCIISSLSAKEDEVKAASESIYQELLEAGIEVLLDDRDERPGFK--FKDAD 521

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               PL I+ G    + G +++K+   G+     I    +  +A V +
Sbjct: 522 LIGIPLRIVVGAKALAEGKVELKERRSGEVEVLPIAEAIAKVKAAVKE 569


>gi|72161176|ref|YP_288833.1| prolyl-tRNA synthetase [Thermobifida fusca YX]
 gi|114152272|sp|Q47RV7|SYP_THEFY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71914908|gb|AAZ54810.1| prolyl-tRNA synthetase, bacterial [Thermobifida fusca YX]
          Length = 582

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 2/103 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +       D +      +Q L   G+R  +      + G +  
Sbjct: 474 DERGIIWPREVAPADVHVVGTGKG-DQVEVALRISQELVDRGVRVLVDDRKGVSPGVKFT 532

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+    P  +I G    + G+++++D A G      +     
Sbjct: 533 DAELLGVPTVLIVG-RGLANGVVELRDRASGDRSEVSVDTVVD 574



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 7/79 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRP 66
               G          +   +   +R      G   +  P L   EY ++ G++    D  
Sbjct: 36  RTAPGVYSWLPLGKIVLENVAAVVREEMNRIGAQEVLLPALLPREYYEATGRWTEYGDT- 94

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F L+D  G    L  
Sbjct: 95  ---LFRLKDRKGADYLLGP 110


>gi|90426188|ref|YP_534558.1| ATP phosphoribosyltransferase regulatory subunit [Rhodopseudomonas
           palustris BisB18]
 gi|90108202|gb|ABD90239.1| ATP phosphoribosyltransferase regulatory subunit [Rhodopseudomonas
           palustris BisB18]
          Length = 388

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 58/319 (18%), Positives = 103/319 (32%), Gaps = 44/319 (13%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           D++   +   G+   E  +L+ ++       ++ R  K ++   D  G+ + LR DLT P
Sbjct: 16  DALLASFGQAGYAKAEPAILQPAEPFLDLSGEDIR--KSLYLTTDAGGEELCLRPDLTIP 73

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE---- 146
           +AR       +   P     +GPVFR        F Q           +A  A+      
Sbjct: 74  VARDYLA-SSSAGKPAGFCYLGPVFRQRGGKRSEFLQAGIESFGRKDRAAADAEMLALAL 132

Query: 147 -------------------MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
                              +   + D L+   + R       N +  L   LE++ L   
Sbjct: 133 GATAAFGVAELDIRTGDVALFTALIDALDLYPVWRRRLIKDFNRKSDLAQDLEQLTLATA 192

Query: 188 DKLNERLIVLRA-------------IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN--L 232
              NE   VL A              D +   G   V         D   + +      L
Sbjct: 193 TPRNEYEGVLAALAGSDRKAALALVTDLMSIAGASNVGGRSVAEIADRFLEQSTLKGGAL 252

Query: 233 TSEQIDIMVSFLSIDLE---KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
             + +D +  FL+I        +          +      +E       +   G + +  
Sbjct: 253 PRDALDKIKRFLAISGSPGDALLQLRALAADAKLDIVAAIDEFEARIGFMAARGIDLSAT 312

Query: 290 KISSTIVRGLEYYTGCVYE 308
           + S++  RG++YYTG  +E
Sbjct: 313 RFSTSFGRGVDYYTGFEFE 331


>gi|304413226|ref|ZP_07394699.1| Prolyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304284069|gb|EFL92462.1| Prolyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 597

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 37/103 (35%), Gaps = 4/103 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R+  ++ + +R    N G   +  P+++ +D L +     D+ 
Sbjct: 31  MIQQVTSGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPMVQPAD-LWQESGRWDKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPC 106
              +    D   +   L     ++   L R   +++  +    
Sbjct: 90  GLELLRFVDRHERHFVLGPTHEEVITALVRNQIKSYKQLPLNL 132


>gi|157165430|ref|YP_001465955.1| threonyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|171855003|sp|A7ZAZ7|SYT_CAMC1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|112801821|gb|EAT99165.1| threonyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 606

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/263 (11%), Positives = 83/263 (31%), Gaps = 11/263 (4%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D+S  F   + +  E I  ++ F    +E         +    A   G +E+   +
Sbjct: 348 EFAQDDSHIFCMPSQI-KENILEILKFAGTIMENFGFHYEMEISTKPAKAIGGDEIWDTA 406

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----G 331
               K   + N  K       G  Y      +       +  K +               
Sbjct: 407 TKALKEALDENGFKYGIDEGGGAFYGPKIDIKIT---DALKRKWQCGTIQVDFNLPERFD 463

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
             Y    +  +   +          R I  L    +       + P  +  +      L 
Sbjct: 464 LGYIDANNERQRPVMLHRALLGSFERFIGILLEHTAGELPFF-IAPTQVVIVPISDAHLD 522

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +  ++ LR   + +E+    +++   +++ A+++  P+ ++ G  E +   + ++D  
Sbjct: 523 YAKEISRELRKINVDSEIA-SKNESLNKRIRTAEKQRVPMIVVLGDNEVANKSVALRDRQ 581

Query: 452 KGKELSREIKNNESWREARVAQI 474
              +    +    +  + +++++
Sbjct: 582 ARTQSDMSLAEFVNLTKEKLSEV 604



 Score = 37.1 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R+++   +   + + G++P+  P L  +D   +         + ++  
Sbjct: 232 GLPIWLPNGGRLRSKLEQLLYKAHRDRGYEPVRGPELLKADV-WRRSGHYANYKENMY-F 289

Query: 74  QDDDGQWISLRYDLTAP 90
              D     ++      
Sbjct: 290 TTIDETEYGIKPMNCVG 306


>gi|152977868|ref|YP_001343497.1| prolyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171472919|sp|A6VKR5|SYP_ACTSZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150839591|gb|ABR73562.1| prolyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 571

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   +  G  +     +++  ++ + IR      G   +  P+++ ++ L +     ++ 
Sbjct: 31  MIRSMASGLYNWLPTGVKVLKKVENIIREEMNKGGAIEVLMPVVQSAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVFRNEK 119
              +    D   +   L     ++   L R       +    +      +R     R   
Sbjct: 90  GPELLRFSDRGNRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M  +  +    +G
Sbjct: 150 MRSREFVMKDAYSFHTTQESLQQTYEVMYQVYTNIFTRLG 189



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M       +  +   Q L+  G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVRAFAEELYQTLKAQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +G ++ K+   G++         ++    V 
Sbjct: 539 DKGEIEYKNRRNGEKQMIAKDRLLAFLAENVK 570


>gi|113461448|ref|YP_719517.1| prolyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123031424|sp|Q0I4S8|SYP_HAES1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112823491|gb|ABI25580.1| prolyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 571

 Score = 63.7 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 32/85 (37%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G  +     +R+  ++ + +R      G   +E P+++ ++ L +  
Sbjct: 26  MLRAGMIRP-LASGLYNWLPTGLRVLKKVENIVREEMNKSGAIEVEMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              ++    +    D   +   L  
Sbjct: 84  QRWEQYGPELLRFVDRGNRDFVLGP 108



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 40/142 (28%), Gaps = 5/142 (3%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD----SDSL 390
           +    +         G S  ++  I      +    +  E+ P  +  +  +     +  
Sbjct: 430 EDGRPQTMIMGCYGIGVSRVVAATIEQCHDEKGIIWSSDEIAPFTVAIIPMNMYKSKNVQ 489

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +   Q L    +         +  G      +    P  I+ G     +G ++ K+ 
Sbjct: 490 IFAEELYQSLLNKNVDVIFDDRKER-PGVMFADMELIGVPHMIVIGEKNLEKGEIEYKNR 548

Query: 451 AKGKELSREIKNNESWREARVA 472
             G++     +    +   RV 
Sbjct: 549 RTGEKQIIAKEQVLDFLAQRVN 570


>gi|322374759|ref|ZP_08049273.1| threonine--tRNA ligase [Streptococcus sp. C300]
 gi|321280259|gb|EFX57298.1| threonine--tRNA ligase [Streptococcus sp. C300]
          Length = 647

 Score = 63.7 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 48/395 (12%), Positives = 100/395 (25%), Gaps = 40/395 (10%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR-- 616

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                           R  +    T+P+ + V+ +
Sbjct: 617 ----------------RYGQKETQTVPVDKFVAAI 635



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|312143811|ref|YP_003995257.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904462|gb|ADQ14903.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 652

 Score = 63.7 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 72/249 (28%), Gaps = 4/249 (1%)

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           ID++   +     +               +K  +      +   K     + + +     
Sbjct: 405 IDLINYMMESIGIEDDIWYRFSKWDPENKDKYIDNPEAWKDSQAKMKTILDNLDMEYEEA 464

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---GFSI 353
            G   + G   +         E     V        R+D        +          SI
Sbjct: 465 DGEAAFYGPKLDIQFKNVHGKEDTIITVQIDFALPERFDMTYIDENNEKQHPIVIHRTSI 524

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G     +A+   + +      + PV    +    D L       + L    IR E+   +
Sbjct: 525 GCYERTLAMLIEKYAGAFPTWLAPVQAKIIPVSDDQLDYAYQIKKELEADDIRVEVDART 584

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            K  G +++ A     P  +I G+ E   G + +++  +G   +  +   +    A +  
Sbjct: 585 EK-VGYKIREAQVEQVPYMLIVGSREEENGSVSVRERREGDLGTSPLAEFKERILAEIEN 643

Query: 474 ITIPISELV 482
             I   + +
Sbjct: 644 KVINKEDAI 652



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   + +  E  G+   +TP +  SD   +     +    G+F L
Sbjct: 263 GLPLLKPKGAKVVQILQRFVEDEEEKRGYQITKTPFMAKSDLY-EISGHWEHYKDGMFIL 321

Query: 74  QD--DDGQWISLRYDLTAPL 91
            D   D   ++LR  +T P 
Sbjct: 322 GDEEKDDNLMALRP-MTCPF 340


>gi|296132879|ref|YP_003640126.1| prolyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031457|gb|ADG82225.1| prolyl-tRNA synthetase [Thermincola potens JR]
          Length = 579

 Score = 63.7 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+  ++   +R   +  G   +  P+++ ++ L +     D     +F 
Sbjct: 37  SGIYTYLPLANRVIKKVSQIVREEMDRKGGQELILPIMQPAE-LWQESGRWDVYGDELFR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           L+D  G+  +L     ++   L R    ++  +       +  
Sbjct: 96  LKDRHGRSFALGPTHEEIITDLVRNEIRSYKQMPMLLYQIQNK 138



 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 38/108 (35%), Gaps = 1/108 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     +++      S+ +   +     L  AGI   +   + +  G + K AD 
Sbjct: 462 IWPMSIAPFQVIVVPVSAKSSEQVELAERIYSQLLEAGIEVIIDDRNER-PGVKFKDADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P+ +  G      G ++++    G      ++   ++ +  V + 
Sbjct: 521 IGYPIRVTVGNKAVDEGRVEVRLRKTGDTRDLPVEEVVTYVKNLVDEE 568


>gi|289523104|ref|ZP_06439958.1| threonine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503647|gb|EFD24811.1| threonine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 624

 Score = 63.7 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 2/138 (1%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +        + R +  L    +       + PV +  +    + L+ 
Sbjct: 481 TYIGPDGEPHRPVMIHRTVLGSLERFLGILIEQYAGAFPYW-LAPVQVKILPVSDEHLTY 539

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +    +L+   +R E+        G +++ A  +  P  II G  E    ++ ++D +K
Sbjct: 540 AKNVASLLQKQDVRVEVDRKEG-TLGKKIRDAQMQKTPYMIIIGNREVENEVVSVRDRSK 598

Query: 453 GKELSREIKNNESWREAR 470
           G   S  ++  +      
Sbjct: 599 GDLGSMSLEALKELLSNE 616



 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +++E P GF     K + + N ++D  R ++   G+  I+TPL+   D   +     D  
Sbjct: 242 MQSEAP-GFPFFHPKGVVVLNVLVDFWRKVHVQRGYQEIKTPLILDQDLWIRS-GHWDHY 299

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
            + ++   + DG+  +++      
Sbjct: 300 RENMY-FTEIDGKPFAIKPMNCPG 322


>gi|28211884|ref|NP_782828.1| threonyl-tRNA synthetase [Clostridium tetani E88]
 gi|73919782|sp|Q891T0|SYT_CLOTE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28204327|gb|AAO36765.1| threonyl-tRNA synthetase [Clostridium tetani E88]
          Length = 639

 Score = 63.7 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M                L+  GIR E     ++  G +++ A  +  P  I
Sbjct: 534 WLAPVQVKVMTITDSQKDYANKVVNDLKEKGIRVEFD-DRNEKIGYKIREAQLQKVPYMI 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           I G  E S   + ++   +G   +  +K   +     +    +
Sbjct: 593 ILGDKEVSENKVAVRSRKEGDLGAISLKEFVAKLNYEIDNRIV 635



 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 2/89 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R  +   G+D I TP++   +   +     D   + ++  
Sbjct: 261 GFPFFHPKGMVVRNILENFWREKHTKAGYDEIRTPVILNEELWHRS-GHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTI 102
              D +  +++             +  + 
Sbjct: 319 TKIDNENFAIKPMNCPGSILVYKSHLHSY 347


>gi|170718445|ref|YP_001783662.1| prolyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083500|sp|B0UWK9|SYP_HAES2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|168826574|gb|ACA31945.1| prolyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 571

 Score = 63.7 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 32/85 (37%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G  +     +R+  ++ + +R      G   +E P+++ ++ L +  
Sbjct: 26  MLRAGMIRP-LASGLYNWLPTGLRVLKKVENIVREEMNKSGAIEVEMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              ++    +    D   +   L  
Sbjct: 84  QRWEQYGPELLRFVDRGNRDFVLGP 108



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 40/142 (28%), Gaps = 5/142 (3%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD----SDSL 390
           +    +         G S  ++  I      +    +  E+ P  +  +  +     +  
Sbjct: 430 EDGRPQTMIMGCYGIGVSRVVAATIEQCHDEKGIIWSSDEIAPFTVAIIPMNMYKSKNVQ 489

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +   Q L    +         +  G      +    P  I+ G     +G ++ K+ 
Sbjct: 490 IFAEELYQSLLNKNVDVIFDDRKER-PGVMFADIELIGVPHMIVIGEKNLEKGEIEYKNR 548

Query: 451 AKGKELSREIKNNESWREARVA 472
             G++     +    +   RV 
Sbjct: 549 RTGEKQIIAKEQVLDFLAQRVN 570


>gi|238796636|ref|ZP_04640143.1| Prolyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719614|gb|EEQ11423.1| Prolyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 572

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 43.7 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR+ GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +      +  +++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKHRRAGEKQMIKTSEIIEFLLSQIK 571


>gi|309775936|ref|ZP_07670928.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916218|gb|EFP61966.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 564

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 59/564 (10%), Positives = 139/564 (24%), Gaps = 103/564 (18%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK+        G         R+  +I + +R   +  G   +  P +   +   K  
Sbjct: 31  MIKKSS------SGIYMIMPMGKRVLKKIEEIVREEMDAAGAQELLMPAMIPEEIYEKS- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +     +F+L+D   +   L     +L             +                
Sbjct: 84  GRREAFGSNMFALKDRYQKNYVLGPTHEEL---FTMAAMMKGSSYKDFPYNLYQIQTKFR 140

Query: 118 EKHGPGR----FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
           ++  P       R+FI  D  +              M       +      Y I   +  
Sbjct: 141 DETRPRYGLIRVREFIMKDAYSFDIDEAGLHESYKKMFHAYENIMERCDLTYKIVKADTG 200

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE---GRTDNSGDFTKGA 230
            + G L +      +   + ++     D      +  V            D     T  A
Sbjct: 201 AMGGSLSEEFQAITEIGEDVVVTCDGCDFSSNLEITEVIDTSTPSDAPMQDMEIVETPDA 260

Query: 231 NLTSEQIDIMVSFLS------------------IDLEKSMHELY--ELVKGTIAGEKGFN 270
              ++        ++                  +  ++ ++E    +L++        F 
Sbjct: 261 KTIADVAAFFEKSVNDFVKTLIYSVDGKTMAFLLKGDRELNETKVLKLLQANEIELASFE 320

Query: 271 E----------------LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           E                L     + R+     N I  ++     ++      +       
Sbjct: 321 EVERVTHARVGFAGPVNLECPIIMDREVANMKNFIVGANKTDHHIKNVNLKDFSVETVAD 380

Query: 315 VMNEKQKPVVFGS-----------------------VGGGGRYDGLVSRFKGQNVPATGF 351
           +    +  +                              G  Y  + ++     +   GF
Sbjct: 381 IAQVHEGDICPVCGKPLKFCKGIEVGNTFKLGTKYAKALGLEYQDVNNKLHPVEMGCYGF 440

Query: 352 SIGISRLIVALKSLES----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
            +      +  +  ++       ++      ++     D + +       + L+  G+  
Sbjct: 441 GLERCMAAIVEQHNDASGIIWPASVAPFEVAVVVVSSKDEEQMRIGNELYEALKKEGVDV 500

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            +     +  G + K  +    P  I  G      G ++ +                   
Sbjct: 501 LLDDRKER-PGVKFKDMELIGIPYRITVG-RGIKDGNVEFR------------------A 540

Query: 468 EARVAQITIPISELVSTVKKILQE 491
                   I +SE+V  VKK L++
Sbjct: 541 RTASESSDIALSEVVELVKKELKK 564


>gi|163839404|ref|YP_001623809.1| prolyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162952880|gb|ABY22395.1| prolyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 619

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 33/100 (33%), Gaps = 1/100 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +  +  DS+     +     L  AG+   +      + G +  
Sbjct: 508 DDRGLVWPIAVAPADVHVVAVGRDSEVFETAEKLAADLEAAGLDVILDDRQKVSPGVKFG 567

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            A+    P+ +  G      G++++K+   G+  +  + +
Sbjct: 568 DAELIGVPMVLAVG-RGLVDGVVELKNRRTGEPNNVPVAD 606



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 8/88 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLG 57
           M +   +R   P G        +R+  ++   IR      G   +  P L   E  ++  
Sbjct: 41  MVRAGYIRRAAP-GIYSWLPLGLRVLGKVEAIIREEMAAIGSQEVHFPALLPCEPYEATN 99

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRY 85
           ++    D    G+F L+D  G    L  
Sbjct: 100 RWTEYGD----GIFRLKDRKGNDYLLAP 123


>gi|256379843|ref|YP_003103503.1| prolyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255924146|gb|ACU39657.1| prolyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 581

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 33/100 (33%), Gaps = 2/100 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +     D+  L   +     L +AG+   +      + G +  
Sbjct: 473 DDRGLIWPRNVAPADVHVVVAGKDATLLEGGEKLAGELSSAGLSVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            A+    P  ++ G    + G++++KD   G+ +   +  
Sbjct: 532 DAELVGVPTILVVG-RGLASGLVEVKDRRSGERVEVPVDE 570



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +R+   I   +R   +  G   I+ P L   E  ++  ++          +F L+
Sbjct: 44  WLPLGLRVLRNIERVVREEMDAIGAQEIQFPALLPKEPYEATNRWTE----YGPNIFRLK 99

Query: 75  DDDGQWISLRY 85
           D  G    L  
Sbjct: 100 DRKGADYLLGP 110


>gi|221194513|ref|ZP_03567570.1| prolyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185417|gb|EEE17807.1| prolyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 571

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V I  +    D++    +        AG+   +     +  G + 
Sbjct: 457 DEHGIIWPVCVAPYEVEIVPLSVGDDTVWPVAKQLADSFVEAGLETVVDDRDER-PGVKF 515

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             AD    P  +I G    + G+ ++K+   G+ +   +    +W  +R+A
Sbjct: 516 ADADLIGLPWQVIVGKRGVANGVAEVKNRETGERVDVALDEVAAWLVSRIA 566



 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R   +I + IR+  +  G   I  P+L  ++ L +     D  
Sbjct: 35  MIRKTAAGLYSYLPLAWRSLRKIEEIIRDEMDGIGAQEILVPILTPAE-LWEESGRWDVY 93

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L D   +  +L  
Sbjct: 94  GPELMRLHDRHERKFALGP 112


>gi|218899729|ref|YP_002448140.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903093|ref|ZP_04067229.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228910399|ref|ZP_04074214.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|218543438|gb|ACK95832.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228849165|gb|EEM94004.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228856502|gb|EEN01026.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 645

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 51/449 (11%), Positives = 112/449 (24%), Gaps = 85/449 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L                       
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVL----------------------- 303

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                + +                                   N           +  + 
Sbjct: 304 ---GSREL----------------------------YETSGHWNHYRDGMFPSMEMDNEE 332

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  +      +R  + G L  +         +R
Sbjct: 333 LVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTM--HRYEMSGALSGL---------QR 381

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSM 252
           +  +   D         +K  L          +    +   E     +S+    D +K  
Sbjct: 382 VRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY---KDFGLENYSFRLSYRDPADTKKYY 438

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    +     G  +         VR        +    L 
Sbjct: 439 ADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLD 496

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    +   V               + +   +     S     +   ++  + +    
Sbjct: 497 FLLPERFELTYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTW 546

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V +  +      L   +     LR AGIR E+     K  G +++ A  +  P  
Sbjct: 547 LAPVQVQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREAQMQKIPYM 604

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  E +   + ++    G++ S  I 
Sbjct: 605 LVVGDNEVTENGVNVR--KYGEQKSETIA 631


>gi|238784905|ref|ZP_04628905.1| Prolyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238714222|gb|EEQ06234.1| Prolyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 572

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 40.2 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +      +      V I  M+       K   +     LR+ GI   +     +  G  
Sbjct: 461 DNRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYVTLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +      +  +++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKHRRAGEKQMIKTSEIIDFLLSQIK 571


>gi|116490538|ref|YP_810082.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Oenococcus oeni
           PSU-1]
 gi|116091263|gb|ABJ56417.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Oenococcus oeni
           PSU-1]
          Length = 663

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 53/491 (10%), Positives = 119/491 (24%), Gaps = 95/491 (19%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             E+  G          IR  I D +       G+  + TP++   D   +     D   
Sbjct: 261 NPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNGYMNVYTPVVSNLDLYKRS-GHWDHYR 319

Query: 68  KGVF-SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
             +F ++  DDG+ + LR                             +F +E        
Sbjct: 320 DDMFPAMTADDGEQLELRPMNCPS--------------------HIEIFEHEPRSYRDLP 359

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
             I             A   +  +   TL           +    + IL  I +      
Sbjct: 360 YRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIRDVYH-DF 418

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    L   D  +            +   D++      A L     D+ + +   
Sbjct: 419 GFTDQDYRFRLSYRDPKNT----------KKYYDDDAMWEHAQAALKRAMDDMGLDYFEA 468

Query: 247 DLEKSMHELYE--LVKGTIAGEKGFNELVVIS---ELVRKSGYNSNRIKISSTIVRGLEY 301
           + E + +        K  +  E+  + + +     E         +       ++     
Sbjct: 469 EGEAAFYGPKLDIQFKTALGNEETMSTIQLDFLLPERFDMKYTGEDGKDHRPVLIHRGVV 528

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
            T   + A L                                                  
Sbjct: 529 GTMERFVAFL-------------------------------------------------- 538

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++  +            ++  +++ +      +     L   G R ++     +  G  +
Sbjct: 539 IEKYKGQFPTWLAPVQAVVIPVNYGAHG-DYARNIYSKLMKDGRRIKLD-NRDEKLGYLI 596

Query: 422 KYAD-RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           + A      P  ++ G  E     + ++     +    +I   E      VA  +     
Sbjct: 597 RDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKIDEFEEMINDDVANYSKGSE- 655

Query: 481 LVSTVKKILQE 491
               V+++L +
Sbjct: 656 ---KVREMLNK 663


>gi|205374566|ref|ZP_03227362.1| threonyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 643

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/329 (9%), Positives = 87/329 (26%), Gaps = 9/329 (2%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M   + +       +   I  N       +  +I   G     
Sbjct: 309 TSGHWDHYQENMFPVMEMDNEELVLRPMNCPHHMMIYKNGIHSYRELPIRIAELGTMHRY 368

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L  + ++    L    + +   +            +   +   +  +      + 
Sbjct: 369 EMSGALAGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVRLVMEVYKDFDLKDYSFRLSYRD 428

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +  +        E+  + L    + +    + ++    ++     L+           
Sbjct: 429 PEDTEKYFDDDQMWERAQSMLKEAMDELDVHYFEADG--EAAFYGPKLDVQVKTALGKEE 486

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               +           +   G                +        +   ++  + +   
Sbjct: 487 TLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVSTME---RFVAFLIEEYKGAFPT 543

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +  +  D       +   + LR+AGIRA++     +  G +++ A  +  P 
Sbjct: 544 WLAPVQVQVIPVSPDV-HFDYAKKVQEELRSAGIRADLD-SRDEKIGYKIREAQMQKIPY 601

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREI 460
            ++ G  E     + ++    G++ S  +
Sbjct: 602 MLVVGDNEIEEEAVNVR--KYGEQKSETL 628



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  I   I +  E  G+D + TP+L   D   K     D   + +F +
Sbjct: 265 GLPLWLPKGATVRRMIERYIVDKEEKLGYDHVYTPVLGSVDLY-KTSGHWDHYQENMFPV 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D + + LR             +         +YR  P+   E     R+  
Sbjct: 324 MEMDNEELVLRPMNCP-------HHMMIYKNGIHSYRELPIRIAELGTMHRYEM 370


>gi|170759804|ref|YP_001788457.1| threonyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688792|sp|B1L0T7|SYT_CLOBM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169406793|gb|ACA55204.1| threonine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 635

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 47/368 (12%), Positives = 98/368 (26%), Gaps = 14/368 (3%)

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
              +R E    G         ++                M  T    G            
Sbjct: 277 ESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDGDYAIKPMNCPGG 336

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
             +    +         +L+E  IV R        GL  V+        D++  +     
Sbjct: 337 ILVYKNSMHSY-RDLPLRLSELGIVHRHELSGALHGLMRVR----CFTQDDAHLYMTKEQ 391

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           +  E + I+                EL            +  + +  +R+     + I  
Sbjct: 392 IKEEIVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLRE---ALDSIGK 448

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT-- 349
              +  G   + G   +  L   +    Q   +        R+D       G+       
Sbjct: 449 EYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMV 508

Query: 350 --GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                  + R I  L    +       + PV +  M+         +   + L+   IR 
Sbjct: 509 HRTIYGSVERFIGILIEQYAGAFP-TWLAPVQVKLMNITDAQYDYLKKVEEALKENNIRV 567

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E+    ++  G +++ A  +  P  +I G  E   G + ++    G   +  ++      
Sbjct: 568 EID-TRNEKIGYKIREAQLQKIPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKI 626

Query: 468 EARVAQIT 475
           +  +   T
Sbjct: 627 KNEIKVKT 634



 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN +    R  +   G+  I TPL+  +++L       D   + ++  
Sbjct: 261 GFPFFHPKGMIIRNILESFWREEHTKAGYQEIRTPLI-LNEALWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 319 TNIDDGDYAIKPMNCPG 335


>gi|110679326|ref|YP_682333.1| prolyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|114152246|sp|Q168E6|SYP_ROSDO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109455442|gb|ABG31647.1| prolyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 451

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/475 (8%), Positives = 119/475 (25%), Gaps = 61/475 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  ++ + +       G  P+  P ++ +D L +     D  
Sbjct: 31  MIKQNAAGIYSWLPLGFKVLRKLENIVHEEQIRAGHVPMLMPTMQSAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GPEMLRIRDRQDRDMLFGPTNEEMITDIFRSHVSSYKDLP--LTLYHIQWKFRDEMRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +                               ++ Y+  +     L      + 
Sbjct: 148 GVMRGREF----------------------------FMKDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A+    +       
Sbjct: 180 SYLRTYERMGLQAI------------PMRADSGPIGGDDTHEFLVLADTGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D   +     +      + E+    +   + L  ++    ++   ++          
Sbjct: 221 VFYDSAVTDLTFGDRDIDYDSVEQCQGVMEEFTNLYARTDETHDQALFAAIPAERQRQAR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F                     DG  +     +       +  + +  +  
Sbjct: 281 GIEVGQIFYFGTKYSDAMGAKVQGP------DGKPTAVHMGSHGIGVSRLVGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                           I  +   D+++ +        LR  G+   ++    +  G +  
Sbjct: 335 EKGIIWPEGVTPFHCGIVNLKQGDTEADAACDALYASLRALGLD-PLYDDRKERAGGKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             D    P  I  G      G++++     G+      +          A   + 
Sbjct: 394 TMDLIGLPWRITVGPRGLKNGVVELTSRKTGESSELPPEEAIEKIAKIYAPHHVS 448


>gi|312134685|ref|YP_004002023.1| threonyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774736|gb|ADQ04223.1| threonyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 639

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 76/262 (29%), Gaps = 6/262 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
             T +        +   ++I  ++  +         + +  +        G +E   ++E
Sbjct: 380 CFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYNVFGFKYHVELSTRPENSMGTDEQWNMAE 439

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
              K       I        G  Y     +          +     +        R+D  
Sbjct: 440 SALKEALEEIGISYKINEGDGAFYGPKIDFHLEDSLKRTWQ--CATIQLDFQMPERFDLY 497

Query: 338 VSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                G             G     +A+ +          + P  +  +    +  +   
Sbjct: 498 YIGEDGAKHRPVMLHRVVFGSIERFIAILTEHFGGAFPVWLAPTQVRVIPVSDNFNNYAA 557

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             +Q+L+  G R E     S+  G +++ A  +  P  +I G  E+    + ++D  KG 
Sbjct: 558 KVSQILKENGFRVEEDY-RSETVGYKIRDAQLQKIPYMVIVGEKEQKENTVAVRDRKKGD 616

Query: 455 ELSREIKNNESWREARVAQITI 476
             S  I    S  + +V +  I
Sbjct: 617 LGSFTIDEFVSMMKEKVEKKVI 638



 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  ++  G+  I+TP++   +   +     D   + ++  
Sbjct: 264 GFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLTKELWIQS-GHWDHYKENMY-F 321

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q  +++      
Sbjct: 322 TKIDDQEFAIKPMNCPG 338


>gi|257091083|ref|ZP_05585444.1| threonyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|256999895|gb|EEU86415.1| threonyl-tRNA synthetase [Enterococcus faecalis CH188]
          Length = 645

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 120/463 (25%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +     G+  + TP++   +   K     D  ++ +F 
Sbjct: 261 SGLPFWLPKGATIRRTIERYIVDKEIRLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 319

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 320 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 360

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 361 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 416

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 417 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 466

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 467 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 526

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 527 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 571

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 572 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 600

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 601 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 640


>gi|228967672|ref|ZP_04128693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792048|gb|EEM39629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 645

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 51/449 (11%), Positives = 112/449 (24%), Gaps = 85/449 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L                       
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVL----------------------- 303

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                + +                                   N           +  + 
Sbjct: 304 ---GSREL----------------------------YETSGHWNHYRDGMFPSMEMDNEE 332

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  +      +R  + G L  +         +R
Sbjct: 333 LVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTM--HRYEMSGALSGL---------QR 381

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSM 252
           +  +   D         +K  L          +    +   E     +S+    D +K  
Sbjct: 382 VRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY---KDFGLENYSFRLSYRDPADTKKYY 438

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    +     G  +         VR        +    L 
Sbjct: 439 ADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLD 496

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    +   V               + +   +     S     +   ++  + +    
Sbjct: 497 FLLPERFELTYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTW 546

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V +  +      L   +     LR AGIR E+     K  G +++ A  +  P  
Sbjct: 547 LAPVQVQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREAQMQKIPYM 604

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  E +   + ++    G++ S  I 
Sbjct: 605 LVVGDNEVTENGVNVR--KYGEQKSETIA 631


>gi|229019800|ref|ZP_04176603.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026025|ref|ZP_04182408.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735241|gb|EEL85853.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741525|gb|EEL91722.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 645

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 50/449 (11%), Positives = 111/449 (24%), Gaps = 85/449 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L                       
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVL----------------------- 303

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                + +                                   N           +  + 
Sbjct: 304 ---GSREL----------------------------YETSGHWNHYRDGMFPSMEMDNEE 332

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  +      +R  + G L  +         +R
Sbjct: 333 LVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTM--HRYEMSGALSGL---------QR 381

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSM 252
           +  +   D         +K  L          +    +   E     +S+    D +K  
Sbjct: 382 VRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY---KDFGLENYSFRLSYRDPADTKKYY 438

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    +     G  +         VR        +    L 
Sbjct: 439 ADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLD 496

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    +   V               + +   +     S     +   ++  + +    
Sbjct: 497 FLLPERFELSYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTW 546

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  +  +      L   +     LR AGIR E+     K  G +++ A  +  P  
Sbjct: 547 LAPVQAQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREAQMQKIPYM 604

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  E +   + ++    G++ S  I 
Sbjct: 605 LVVGDNEVAENGVNVR--KYGEQKSETIA 631


>gi|227498537|ref|ZP_03928681.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226903993|gb|EEH89911.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 636

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN +++  R ++  Y +  + TP++     L +     D   + ++  
Sbjct: 263 GFPFFLPNGMILRNELINYWREVHRKYNYYEVSTPMIMNRQ-LWETSGHWDHYKENMY-F 320

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 321 TKIDGEDYAIKPMNCPG 337



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 43/115 (37%), Gaps = 19/115 (16%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M          +     +   GIRA +    ++  G +++    +  P  ++ G  
Sbjct: 541 QVRVMPITDKFNEYAKSVVDKMEALGIRAHLD-DRNEKIGYKIREGQVKKVPYMLVVGEK 599

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           E + G + ++  ++G+  +                  + + E ++ ++K ++E K
Sbjct: 600 EATNGTVSVRSRSEGEMGA------------------MAVDEFIAKLQKEIKEKK 636


>gi|237738009|ref|ZP_04568490.1| prolyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229419889|gb|EEO34936.1| prolyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 569

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 79/256 (30%), Gaps = 13/256 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        ++   ++ + +R   +  G   I  P+L+ ++ L K     +  
Sbjct: 31  MIKKLTSGVYTYLPLGLKALKKVENIVRREMDRAGAQEIFMPVLQPAE-LWKESGRWEVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVFRNEK 119
              +  LQD   +   L     ++   + R       +    +      +R     R   
Sbjct: 90  GPLMMKLQDRAKRDFVLGPTHEEVVTDVIRNDVASYKQLPLNLYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F             S +     M         + G+K   +     +   + G  
Sbjct: 150 MRGREFIMKDAYSFHATRESLDEEFDNMEATYKRIFSSCGLK---FRPVEADSGAIGGSG 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            K      D   + +I   + D          K+   E     + +     N++  +I+ 
Sbjct: 207 SKEFHVLADSGEDEIIYCESCDYAANVETAVSKVFHAEKEELKAVELVDTPNVS--KIED 264

Query: 240 MVSFLSIDLEKSMHEL 255
           +V +L + +E+++  +
Sbjct: 265 VVEYLKVPVERTVKAM 280



 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 83/320 (25%), Gaps = 20/320 (6%)

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             N   ++ ++E + +  +  +   +      D++    ++G    + E +  N+ D  +
Sbjct: 256 TPNVSKIEDVVEYLKVPVERTVKAMMYRDMGTDQVYMVLIRG-DYEVNETKLKNAVDAIE 314

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE------LVVISELVRKS 282
              LT EQ++ +           +      V       +  N       +      V   
Sbjct: 315 VELLTDEQLEKLGLVKGFIGPFGIDLGDIKVVADDTVLEITNHTAGGNKIDTHYINVNYG 374

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
                 I      V+             L      E       G+          +    
Sbjct: 375 RDYKADIIKDVKTVKPGHVCEK--CGGTLASARGIEVGHIFKLGTKYSEKLEATFIDEKG 432

Query: 343 GQNVPATGFSIGISRLIVA-LKSLESSTNNIKEMGPVLITTMD------HDSDSLSKYQM 395
             +    G         +A      +    I     +    +D       D++ ++  + 
Sbjct: 433 VTHPIIMGCYGIGVSRTLASAIEQNNDEFGIVWPSAIAPYVVDVIPANMKDAEQVALAEE 492

Query: 396 YTQMLRTAGIRAEMFL-GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
               L   GI   +        F    K AD    P  +I G    + G++++K    G+
Sbjct: 493 LYNSLLDEGIDTILDDRDERPGFK--FKDADLIGFPFKVICGKK-AAEGIVELKIRKTGE 549

Query: 455 ELSREIKNNESWREARVAQI 474
                           + Q 
Sbjct: 550 TFEISKDEVIYKVRELMKQY 569


>gi|90417103|ref|ZP_01225031.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331119|gb|EAS46375.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 574

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R+  ++   +R   +  G   I  P+++ +D L        + 
Sbjct: 31  MIRKVASGLYSWLPLGLRVFRKVEAIVRQEMDRSGALEIMMPVVQPAD-LWTESGRWGQF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  ++D  G+   L  
Sbjct: 90  GPELLRIKDRHGREFCLGP 108



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 26/92 (28%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          Q     L +AG             G  L   +    P  I+ G    
Sbjct: 482 INMHKSERVAETCQTLYSKLVSAGYEVLFMDEPKARLGGMLADIELIGIPHRIVIGDRGL 541

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G ++ ++  + +     +   + +    +A
Sbjct: 542 ADGNVEYRNRREHENQHIAMDKLDDFIAENIA 573


>gi|294938790|ref|XP_002782200.1| hypothetical protein Pmar_PMAR022527 [Perkinsus marinus ATCC 50983]
 gi|239893698|gb|EER13995.1| hypothetical protein Pmar_PMAR022527 [Perkinsus marinus ATCC 50983]
          Length = 71

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 14/85 (16%)

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            L + K    Q +YADR            E   G ++IKDL  G                
Sbjct: 1   MLEAGKRVDKQFRYADRVGADKIAFVAPSEWEAGKVRIKDLRTGD-------------SE 47

Query: 470 RVAQITIPISELVSTVKKILQENKE 494
              QI IP+S+L +  K   ++  E
Sbjct: 48  ARVQIDIPVSDLANA-KSYFEKQAE 71


>gi|283797704|ref|ZP_06346857.1| threonine--tRNA ligase [Clostridium sp. M62/1]
 gi|291074600|gb|EFE11964.1| threonine--tRNA ligase [Clostridium sp. M62/1]
          Length = 650

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +              + L  AGIRAE+    S+  G +++ A     P  +
Sbjct: 541 WLAPVQVKVLPISDKYADYAAKVYESLSEAGIRAEVD-TRSEKIGYKIREAQTNKIPYML 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E   G + ++    G E +  +++     +  +A   +
Sbjct: 600 VVGQKEEEEGTVSVRSRFAGDEGASSLESFIEKIQKEIASKEM 642



 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K ++++N +LD  R I++  G+  I TP++  + SL +     D     +++ 
Sbjct: 268 GFPFFLPKGMQLKNTLLDYWREIHKKAGYVEISTPII-LNRSLWETSGHWDHYKNNMYTT 326

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
              D +  +++           A 
Sbjct: 327 VI-DEEDYAIKPMNCPGGVLVYAS 349


>gi|253699963|ref|YP_003021152.1| prolyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511598|sp|C6E496|SYP_GEOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|251774813|gb|ACT17394.1| prolyl-tRNA synthetase [Geobacter sp. M21]
          Length = 573

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 59/222 (26%), Gaps = 11/222 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R   ++   +R      G   +  P ++ ++ L K     +  
Sbjct: 31  MIRKLAAGIYNYLPFGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWKESGRWEFY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +    D       +         DL     R   +    +      +R     R   
Sbjct: 90  GKELLRFNDRKDAEFCMGPTHEEVITDLIRKEVRSYRQLPINLYQIQGKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D   + A+ +  +M        E  G+K   +     +   + G  
Sbjct: 150 MRGREFIMKDAYSFDVNEAGADVSYEKMYKAYRRIFERCGLK---FRAVEADTGTIGGNY 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
               +   D   + ++   A +          +   G    D
Sbjct: 207 SHEFMVLADSGEDAIVSCSACEYAANMEKAETRKGEGIEHAD 248



 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQLKYAD 425
                I     ++ +    + +  +  +   Q L  AGI   +        F    K AD
Sbjct: 464 IFPIPIAPFQCIISSLSVKEDEVKAASESIYQELLEAGIEVLLDDRDERPGFK--FKDAD 521

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               PL I+ G    + G +++K+   G+     I    +  +A V +
Sbjct: 522 LIGIPLRIVVGAKALAEGKVELKERRSGEVEVLPIAEAIAKVKAAVKE 569


>gi|297626631|ref|YP_003688394.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922396|emb|CBL56968.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 588

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 35/111 (31%), Gaps = 2/111 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V I       + L       + L  AG+R  +      + G +  
Sbjct: 478 DDKGLCWPAEVAPFQVQIVATGKGGEILEAATRIAEQLDAAGVRVLLD-DRKASPGVKFT 536

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            A+    P +++ G    + G+++++D   G +    ++         + Q
Sbjct: 537 DAELLGMPTSLVVG-RGLADGVVELRDRKTGSKREVSVEEAVDEVLTVLDQ 586



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  R+ + +R   +  G   +  P L   E  +   ++          +
Sbjct: 36  GIYSWLPLGLKVLQRVENIVREEMDAMGGQEVLLPALLPREPYEISNRWAE----YGPNL 91

Query: 71  FSLQDDDGQWISLRY 85
           F L D  G  + L  
Sbjct: 92  FRLVDRKGADMLLGP 106


>gi|295092070|emb|CBK78177.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Clostridium cf.
           saccharolyticum K10]
          Length = 650

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +              + L  AGIRAE+    S+  G +++ A     P  +
Sbjct: 541 WLAPVQVKVLPISDKYADYAAKVYESLSEAGIRAEVD-TRSEKIGYKIREAQTNKIPYML 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E   G + ++    G E +  +++     +  +A   +
Sbjct: 600 VVGQKEEEEGTVSVRSRFAGDEGASSLESFIEKIQKEIASKEM 642



 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K ++++N +LD  R I++  G+  I TP++  + SL +     D     +++ 
Sbjct: 268 GFPFFLPKGMQLKNTLLDYWREIHKKAGYVEISTPII-LNRSLWETSGHWDHYKNNMYTT 326

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
              D +  +++           A 
Sbjct: 327 VI-DEEDYAIKPMNCPGGVLVYAS 349


>gi|126725673|ref|ZP_01741515.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704877|gb|EBA03968.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 470

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 44/464 (9%), Positives = 120/464 (25%), Gaps = 63/464 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I   +       G  P+  P ++ +D L +     D  
Sbjct: 56  MIKQASAGIYSWLPLGLKVLRNIERIVHEEQAKAGHIPVLMPTVQSAD-LWRESGRYDDY 114

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  + D  G  +       +    + R    ++  +      Y+I   FR+E+    
Sbjct: 115 GEEMLRISDRHGHDMLYGPTNEEQITDIFRAHVHSYKDLP--LTLYQIQWKFRDERRPRF 172

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  +     D+ M       +  +             R  L  I     
Sbjct: 173 GVMRGREFLMKDGYNFDIDYDSAMHAYNRHMVAYL---------RTYERMGLKAI----- 218

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      ++   G    +++ +F   A+    ++      
Sbjct: 219 --------------------------PMRADSGPIGGEDTHEFLVLADTGESEVFYDSDI 252

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L ++    + +  ++        + +      ++        ++  +      RG+E   
Sbjct: 253 LDLNFGDRVVDFDDVSACAEVVTE-WTTPYARTDETHDEALYNDIPEARRKSSRGIEVGQ 311

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +                  G+    G  + +        +  +     I        
Sbjct: 312 IFYFGTKYSD----------SMGASVVDGEQNKVPVHMGSHGIGVSRLLGAIIEASH--D 359

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAE-MFLGSSKNFGNQL 421
                           I  +    ++         + L  AG+  E ++   ++  G + 
Sbjct: 360 DNGIIWPEGVTPFHCGIVNLRQGDEATDGACGALYEALTAAGL--EPLYDDRNERAGAKF 417

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              D    P  I  G      G++++     G+     I+    
Sbjct: 418 ATMDLIGLPWRITVGPRGLKNGVVELTSRRTGESQELSIEAAVE 461


>gi|300780959|ref|ZP_07090813.1| proline--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532666|gb|EFK53727.1| proline--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 611

 Score = 63.3 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 60/182 (32%), Gaps = 22/182 (12%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG- 376
           E       G          ++     + VP  G        ++A+ + +   +       
Sbjct: 446 ELGHIFQLGRKYTEAMDVQILDENGKRAVPTMGSYGIGVTRMLAVIAEQLHDDKGLVWPV 505

Query: 377 -----PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D+ ++   +        AGI   +      + G + K A+    P 
Sbjct: 506 EIAPYQVHLAVANKDAAAMEASERLVGEFEAAGIDVLVDDRPKVSPGVKFKDAELLGMPF 565

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            +I G    + G+++++ +  G+                   + +P  E+VS V++++  
Sbjct: 566 IVILGRS-FADGIIELR-IRGGE--------------NGGEILEVPADEIVSRVQELIAA 609

Query: 492 NK 493
            +
Sbjct: 610 AR 611



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        ++    I + +R      G   +  P L   E  ++  ++    D     +
Sbjct: 53  GVYSWLPLGLKAVRNIEEIVREEMNAIGAQELLFPALLPREPYEATNRWTEYGD----DL 108

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G  + L  
Sbjct: 109 FRLQDRKGTDMLLGP 123


>gi|238759923|ref|ZP_04621077.1| Prolyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238701830|gb|EEP94393.1| Prolyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 572

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR+ GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K+   G++   +      +  +++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKNRRIGEKQMIKTSEIIEFLLSQIK 571


>gi|91762385|ref|ZP_01264350.1| histidine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718187|gb|EAS84837.1| histidine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 350

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 62/347 (17%), Positives = 118/347 (34%), Gaps = 48/347 (13%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETP-LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
           ++ +N     +R++ ++ GF  I+ P ++E +  + +         K +FS  D +G  +
Sbjct: 1   MKSKNLSEKILRSV-KSKGFKYIDLPSVIEANHIVQRSGE---NFRKFIFSFTDQNGSEL 56

Query: 82  SLRYDLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            LR DLT A   RY+  N         + +      N+K    R +   +          
Sbjct: 57  CLRPDLTIASCLRYLENNLKGKEKIFYSGQAYRKSNNKKDSIIRDQVGFEIIGS---KDE 113

Query: 141 ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR-- 198
           +  D E+      +L  +        + I N +I + ++ K+ +    KL       R  
Sbjct: 114 KKDDKEIINTALKSLSNLQYSSG--TLKIGNVEIFNLLISKLDIPKRWKLRLSRHFWREV 171

Query: 199 -AIDKLDKFGLQ-GVKLLLGEGRTDNSGDFTKG------ANLTSEQIDIMVSFLSID--- 247
              D L +      V   + E          K       A  + E+I         D   
Sbjct: 172 YFNDLLKRLETNSDVDPTIVEVDKKRYQKMLKDKQQTVVAGRSIEEILKRFDNKIKDPRR 231

Query: 248 ---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS----------- 293
               +     + E +K      +   +L +  +  + +     +   +S           
Sbjct: 232 ASRGKNVSKIIKEFLKINCPIGQAAEKLNIFFKKNKINLVVDQKYFPTSLNKIQKLNVEF 291

Query: 294 --TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
             +  R LEYYTG V++  +     N         ++  GGRYD L+
Sbjct: 292 SASFGRQLEYYTGMVFKIDIKSKSKN--------INIINGGRYDKLI 330


>gi|261403731|ref|YP_003247955.1| glycyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370724|gb|ACX73473.1| glycyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 575

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  + +  D     +   QMLR  GI AE     S   G +   AD    P  I     
Sbjct: 485 YVLPLVNKDDMPKIAKEIEQMLRENGIIAE--YDDSGAIGRRYMRADEIGVPFCITVDGQ 542

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
               G + I++    +++   I+    + +++V
Sbjct: 543 TLKDGTITIRERNTREQVRIHIEELVEYLKSKV 575



 Score = 40.6 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++N I+   R  Y    GF  IE+P +   + L    
Sbjct: 31 GFVDYGPLGCLLKNNIISKFREQYIIKEGFYEIESPTVTPYEVLKASG 78


>gi|83859100|ref|ZP_00952621.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83852547|gb|EAP90400.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 613

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 46/458 (10%), Positives = 114/458 (24%), Gaps = 75/458 (16%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  IR+ +    R      G+  + TP +   D   +         + +++    D
Sbjct: 225 WLPAGNVIRDELEKLARITEHRAGYKRVSTPHITKGDLYHRS-GHLPYYAEDMYAPIMID 283

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            Q   LR                              +                  +  G
Sbjct: 284 EQEYYLRPMNCP---------------HHHMIYAHDQWSYRDLPVRLSEYGQVYRYEASG 328

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
             +                  G  +ND HI     +  D  L  + +H D        + 
Sbjct: 329 GLSGLMRVR------------GFCQNDAHIYCRPDQAKDEFLAVMHMHAD-----YYRLF 371

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D   +  L  ++ L  +   D++  +    ++  + +D                   
Sbjct: 372 GIQDFWMRLSLPDMENL--DKYVDDAEGWKTALSILKQAMD------------------- 410

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
             +     ++   E       V     +    + + +  +     T              
Sbjct: 411 --ESGYPYKEVEGEAAFYGPKVDFMVKSVVGTEYAISTNQLDFMATKRFNLVYTAEDGSK 468

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           +    +    +G   R+   +        P          + +A +  E +     ++  
Sbjct: 469 QPVYVIHRAPMGSHERFAAFLIEHYAGKFPTWLSPTQAVVIPIADRHEEYAQTVRDQLFF 528

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             + +++                    IR E    S +    +++ A  R  P  ++ G 
Sbjct: 529 SEVDSVNTG------------------IRTETDFASER-MQKKIRNAQHRQIPYMLVVGD 569

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            E   G + ++    G   + ++++  +      +  T
Sbjct: 570 AEAENGEVAVRHRDHGDMGTMKVEDLIARIAKEQSGRT 607


>gi|169630222|ref|YP_001703871.1| prolyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|226701313|sp|B1MD96|SYP_MYCA9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169242189|emb|CAM63217.1| Prolyl-tRNA synthetase ProS [Mycobacterium abscessus]
          Length = 580

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 2/100 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L     +      V +   + D  + +  +     L   G    +    + + G + K
Sbjct: 473 DELGLRWPSAVSPFDVHVVIANKDDAARAGAEELAAELDRLGHEVLLD-DRTASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            A+    P  ++ G    + G +++++   G+     + +
Sbjct: 532 DAELLGVPWIVVIG-RGWADGTIELRNRFTGETQPIAVTD 570



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+  +I + +R      G   I  P L      ++  ++    D     +
Sbjct: 40  GVYSWLPLGLRVLRKIENIVREEMNAIGGQEILLPALLPRAPYETTNRWTEYGD----SL 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D     + L  
Sbjct: 96  FRLKDRRDNDMMLGP 110


>gi|298675600|ref|YP_003727350.1| glycyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288588|gb|ADI74554.1| glycyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 582

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 70/544 (12%), Positives = 143/544 (26%), Gaps = 103/544 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLL---------------------- 50
           GF D       ++ RI    R++Y    GF  IETP +                      
Sbjct: 29  GFYDYGPLGSTLKRRIEQIWRDMYVVQEGFMEIETPTIGIEDVFRASGHIGGFSDPLCEC 88

Query: 51  -------------------EYSDSLGKFLPDEDRPNKGV------------FSLQ----- 74
                              E ++++   + ++   +  +            +S       
Sbjct: 89  EECGEAFRADHLVEDELDIESAEAMSNNILEDSIKDNEIPCPVCGGKFGSVYSFNLMFNS 148

Query: 75  ---DDDGQWISLRYDLTAP--------LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
                 G+   LR + TA         LARY  E       P    +IG  +RNE     
Sbjct: 149 NIGPGSGRPAYLRPE-TAQGMFINFLRLARYYREKL-----PFGVTQIGKSYRNEISPRQ 202

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +             D             + +   D + G+     LD  +++  
Sbjct: 203 GVIRLREFTQAEAEIFIPPEDKTHPEFDKYADTVLNMYIEDDNGGVVRPIRLDDAVKEGY 262

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI---- 239
           +  +       +     D L + G+   KL   + + D    +         + D     
Sbjct: 263 IAHEYLAYHIALT---KDFLLRIGINPDKLRFRQHKKDEMAHYAADCWDAEIESDRFGWI 319

Query: 240 ----MVSFLSIDLEKSMHELYELVKGTIAGEK--GFNELVVISELVRKSGYNSNRIKISS 293
               +    + DL+         +      E+    N+  V  ++ +       + K  +
Sbjct: 320 ETVGIADRTNYDLKAHTDTSGTELSIYREYEEPETVNQFTVKPDMSKLGPSYKGKAKTIA 379

Query: 294 TIVRGLEYYT------GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
             ++ L              E        +  +       V G   +  ++    G +  
Sbjct: 380 EKLKQLPPEELEKDNIQVNVEGEEYTVPSDMVEFTEETVKVSGETVFPHVIEPSYGIDRI 439

Query: 348 ATGFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
                       +  +  E          N      V +  +   SD +   +  +   R
Sbjct: 440 IYCVLEHAYNKELINEDGEEDYRIILRFKNEVSPIQVAVLPLMSKSDLIKPARDISARFR 499

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             G+   +    S   G + +  D    P ++           + I+D    K++     
Sbjct: 500 KKGL--MVSYDDSGTIGRRYRRNDEIGTPYSVTIDYQTLEDNTVTIRDRDTMKQIRLSKD 557

Query: 462 NNES 465
           N E 
Sbjct: 558 NIED 561


>gi|298346548|ref|YP_003719235.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298236609|gb|ADI67741.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 623

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 43/128 (33%), Gaps = 7/128 (5%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +     D +  +  +     L  AG++         + G + K
Sbjct: 488 DDRGLMWPLNIAPFQVHVLATGKDPEIFATAEKLACQLDAAGLQVLYDDRPKASAGVKFK 547

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARVAQ-----ITI 476
            A+    P A++ G G  + G ++I+   +G  + +      E   +A   +      ++
Sbjct: 548 DAELLGMPYALVVGKG-LAEGKVEIRQRREGTTQETTPESCVEELLQAIEKETAKTAFSL 606

Query: 477 PISELVST 484
             +EL+  
Sbjct: 607 TSTELIGE 614



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        ++   R+ + +R   +  G   ++ P+L  S+         +     +F L
Sbjct: 40  GIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPMLLSSEPYVATN-RWEEFGPSLFKL 98

Query: 74  QDDDGQWISLRY 85
           +D       L  
Sbjct: 99  KDRKEGDYLLAP 110


>gi|149195433|ref|ZP_01872516.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134438|gb|EDM22931.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 613

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/252 (11%), Positives = 82/252 (32%), Gaps = 7/252 (2%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F +   +  E I  ++ F+   +++   +    +        G +E  +  
Sbjct: 356 EFTQDDAHIFCRPEQIEEEVI-KVLDFVDSIMQRFGFKYEMEISTRPEKSIGSDE--IWE 412

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
           +         N++     I  G   + G   +  +   +  + Q   +        R+D 
Sbjct: 413 KATEALKNALNKLNREYGIDEGGGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERFDI 472

Query: 337 LVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                  +           IG     +A+ +   +      + P+    +    + +   
Sbjct: 473 SYIDENNERKRPVMIHRAIIGSFERFIAILTEHYAGEFPTFIAPIKAIFVPISENHIDYA 532

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + L    ++ E++  +  +   +++ A+++     +I G  E   G + I+D  K 
Sbjct: 533 KEIQKELLKDDLKTEIYASND-SLNKRIRNAEKQKVAYVVIIGDEEVKDGTVAIRDRRKR 591

Query: 454 KELSREIKNNES 465
            +   +      
Sbjct: 592 TQYKMKKGEFVE 603


>gi|70607029|ref|YP_255899.1| threonyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68567677|gb|AAY80606.1| threonine-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 552

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 62/205 (30%), Gaps = 15/205 (7%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS   ++S+    +  K T A     NEL +  E+  K G                 ++ 
Sbjct: 326 LSTRPDESIGTDEQWNKATDALISALNELNIKYEVKEKEGAFYGPKIDFDIRDSLSRWWQ 385

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
               +     P   + +              D   S+ +   V    +      + + L+
Sbjct: 386 LSTIQVDFNLPERFKLEYV------------DKDGSKKRPVMVHRAIYGSIDRFMAILLE 433

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                         V +  +  + +      M    LR   IR +M  G  +    ++K 
Sbjct: 434 HFRGKLPTWLSPIQVRVLPITDEIEDYGNSLM--AKLRENKIRVDMDSGE-ETLSKRIKK 490

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIK 448
           A     P  II G  E+  G + ++
Sbjct: 491 AYDDGVPYLIIVGRKEKDEGKVTVR 515



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 1/80 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E P G          IR  ++  +  I ++ G+  + T  + Y   L K     D     
Sbjct: 161 EAPPGVVLFHPNGQIIRKEMMRFMEEINDSMGYKEVYTSHV-YRSLLWKISGHYDYYKDK 219

Query: 70  VFSLQDDDGQWISLRYDLTA 89
           +   + D+ + + ++     
Sbjct: 220 MLLFEIDNDEELGIKPMNCP 239


>gi|76363445|sp|Q4J9C4|SYT_SULAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 549

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 62/205 (30%), Gaps = 15/205 (7%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS   ++S+    +  K T A     NEL +  E+  K G                 ++ 
Sbjct: 323 LSTRPDESIGTDEQWNKATDALISALNELNIKYEVKEKEGAFYGPKIDFDIRDSLSRWWQ 382

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
               +     P   + +              D   S+ +   V    +      + + L+
Sbjct: 383 LSTIQVDFNLPERFKLEYV------------DKDGSKKRPVMVHRAIYGSIDRFMAILLE 430

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                         V +  +  + +      M    LR   IR +M  G  +    ++K 
Sbjct: 431 HFRGKLPTWLSPIQVRVLPITDEIEDYGNSLM--AKLRENKIRVDMDSGE-ETLSKRIKK 487

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIK 448
           A     P  II G  E+  G + ++
Sbjct: 488 AYDDGVPYLIIVGRKEKDEGKVTVR 512



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 1/80 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E P G          IR  ++  +  I ++ G+  + T  + Y   L K     D     
Sbjct: 158 EAPPGVVLFHPNGQIIRKEMMRFMEEINDSMGYKEVYTSHV-YRSLLWKISGHYDYYKDK 216

Query: 70  VFSLQDDDGQWISLRYDLTA 89
           +   + D+ + + ++     
Sbjct: 217 MLLFEIDNDEELGIKPMNCP 236


>gi|239623178|ref|ZP_04666209.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522545|gb|EEQ62411.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 643

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 3/129 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++           + PV +  +     S+       + L+ AGIR
Sbjct: 517 HRVCFGSIERFIGILIEHFAGKFPVW--LAPVQVKVIPVSEKSMEYATGVYEKLKAAGIR 574

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            E+     K  G +++ A     P  ++ G  E + G + ++   KG   +  +++  + 
Sbjct: 575 TELDHKDEK-VGYKIRQAQLEKVPYMLVLGEKEAAEGAITVRSRDKGDLGAAVLEDFIAD 633

Query: 467 REARVAQIT 475
            +  V    
Sbjct: 634 IKKMVEAKE 642



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R I++  G+  + TP++  S  L +     D     +++ 
Sbjct: 269 GFPFFLPKGMTLKNTLIDYWREIHQREGYQEVSTPII-LSRKLWENSGHWDHYKDNMYTT 327

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 328 VI-DEEDYAVKPMNCPG 343


>gi|189501972|ref|YP_001957689.1| threonyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497413|gb|ACE05960.1| hypothetical protein Aasi_0559 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 644

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/371 (10%), Positives = 100/371 (26%), Gaps = 35/371 (9%)

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              G + ++ +     + +  E  +  +  M       +       +  +  R    G +
Sbjct: 309 MTSGHYDKYGEDSFQPIRTPHEGEEFFLKPMNCPHHCEIYKHEPRSYRDLPVRLAEFGTV 368

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +   HG+     R       D         V+    +   D           +      
Sbjct: 369 YRYEQHGELHGLVRTRGFTQDDAHIFCRNDQVREEFAK-VIDLVTYVFSALGFSDYTAR- 426

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
               LS    + +H+     +     E+   E+  + +L       +  +  ++     L
Sbjct: 427 ----LSFRDPEQLHKYIGDQEDWDKAEEAIEEVAKLRKL-----NTTKALGEAAFYGPKL 477

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           ++              +    +  V   +   G  +      +   +    F      + 
Sbjct: 478 DFMVKDALGRNWQLGTVQLDYQLPVRFDLSYTGADNKK---HRPVMIHRAPFGSLERFIA 534

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L+              V I  +       +  +   Q LR   IR  +     +  G 
Sbjct: 535 ILLEHTAGKLPLWLAPEQVAILPIS--EKFAAYAEEVNQNLRNKDIRCFIDH-RDEKIGK 591

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +++ A+    P   I G  E+    + ++                  ++    Q + PI 
Sbjct: 592 KIREAELSKIPYMFIIGEKEQLERTVSVR------------------KQGAGDQGSFPID 633

Query: 480 ELVSTVKKILQ 490
           +LV  + + + 
Sbjct: 634 KLVQEIVEDIS 644



 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 69/235 (29%), Gaps = 11/235 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +R ++   +R      G+ P+ TP + + +         D+  +  F  
Sbjct: 266 GLPLWLPRGTVLREQLEQFLRRAQVKAGYQPVVTPHIGHKELYMTS-GHYDKYGEDSFQP 324

Query: 74  --QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
                +G+   L+             + +      R+YR  PV   E     R+ Q  + 
Sbjct: 325 IRTPHEGEEFFLKPMNCP-------HHCEIYKHEPRSYRDLPVRLAEFGTVYRYEQHGEL 377

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
               V +   T D        D +     K  D    + +         ++     ++L+
Sbjct: 378 H-GLVRTRGFTQDDAHIFCRNDQVREEFAKVIDLVTYVFSALGFSDYTARLSFRDPEQLH 436

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           + +      DK ++   +  KL               G  L     D +     +
Sbjct: 437 KYIGDQEDWDKAEEAIEEVAKLRKLNTTKALGEAAFYGPKLDFMVKDALGRNWQL 491


>gi|163850927|ref|YP_001638970.1| ATP phosphoribosyltransferase regulatory subunit [Methylobacterium
           extorquens PA1]
 gi|163662532|gb|ABY29899.1| tRNA synthetase class II (G H P and S) [Methylobacterium extorquens
           PA1]
          Length = 387

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 123/390 (31%), Gaps = 69/390 (17%)

Query: 20  TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
                    +   +   +   G+ P   P+L+  +   +   ++ R  + +F  QD +G 
Sbjct: 9   PSGAEALRHV--RLSAHFSACGYVPASPPVLQPVEPFLELSGEDIR--RRIFVTQDANGA 64

Query: 80  WISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
            + LR + T P+ R    +  T          +GPVFR     P  F Q     +    +
Sbjct: 65  ELCLRPEFTIPVCRL---HQATRPGESADYSYLGPVFRLVAGEPDEFVQGGIESIGRTDT 121

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH--GDDKLNERLIV 196
            A  A+     +         + R+D  + + +  +    L+ + +      +    +  
Sbjct: 122 PAADAEVLGLALE----GLALLGRSDVTVRLGDMGLTHAFLDALHVPPVAKRRTLRAIAA 177

Query: 197 LRAIDKLDKFGLQG-----------------VKLLLGE---------------------G 218
            R+ D++                        V+  + +                      
Sbjct: 178 GRSFDEVANSVQAEDRHAGLLAAIQGQDAGAVRAFVEDVLSIAGISQVGGRSAGAIAERF 237

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG------EKGFNEL 272
               S     GA L +   +++  + +I  +              AG      E      
Sbjct: 238 LAKASAQAHGGAGLNATNRELIERYCAISGDPDAAVAAVRALAREAGLTHDGLEAALALF 297

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +  +   G    R + +    R L+YYTG ++E             P    ++ GGG
Sbjct: 298 EERTGFMAARGLPVERFRFNGGFARNLDYYTGFIFEVT----------GPQGGPTLVGGG 347

Query: 333 RYDGLVSR-FKGQNVPATGFSIGISRLIVA 361
           RYDGL+ +      +PA G +  +SR   A
Sbjct: 348 RYDGLLQQLGSPVPLPAVGCAFWLSRCAQA 377


>gi|295115128|emb|CBL35975.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [butyrate-producing bacterium SM4/1]
          Length = 605

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +              + L  AGIRAE+    S+  G +++ A     P  +
Sbjct: 496 WLAPVQVKVLPISDKYADYAAKVYESLSEAGIRAEVD-TRSEKIGYKIREAQTNKIPYML 554

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E   G + ++    G E +  +++     +  +A   +
Sbjct: 555 VVGQKEEEEGTVSVRSRFAGDEGASSLESFIEKIQKEIASKEM 597



 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K ++++N +LD  R I++  G+  I TP++  + SL +     D     +++ 
Sbjct: 223 GFPFFLPKGMQLKNTLLDYWREIHKKAGYVEISTPII-LNRSLWETSGHWDHYKNNMYTT 281

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
              D +  +++           A 
Sbjct: 282 VI-DEEDYAIKPMNCPGGVLVYAS 304


>gi|24374667|ref|NP_718710.1| prolyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|81845788|sp|Q8ECI8|SYP_SHEON RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24349306|gb|AAN56154.1|AE015752_11 prolyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 570

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       D+ 
Sbjct: 31  MIRRNASGLYSYLPSGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWDKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHNRDFVLGP 108



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AGI   +     +  G  
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIDVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      G+ + K+   G++          + +   A
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPFDQIVDFLKNLQA 570


>gi|319946565|ref|ZP_08020800.1| threonine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747311|gb|EFV99569.1| threonine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 647

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 97/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NL +E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYGDFNL-NEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  +    +   A +A
Sbjct: 619 GQKETNTVSVDEFVAAILADIA 640



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|157164620|ref|YP_001467551.1| ATP phosphoribosyltransferase regulatory subunit [Campylobacter
           concisus 13826]
 gi|112801072|gb|EAT98416.1| tRNA synthetase, class II [Campylobacter concisus 13826]
          Length = 286

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 39/118 (33%), Gaps = 8/118 (6%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M        E+P G      K  +++ +I      I E+ GF  I TP   Y   L    
Sbjct: 1   MSDVNVYEHEIPNGSKLYFAKSAKLKRKIEQKASEILEDEGFSEIVTPFFSYHQHLS--- 57

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
                    +    D     ISLR D T    R V         P R + I PVFR  
Sbjct: 58  ----VDATNLLRFSDSLNHEISLRADSTVDTVRIVL-RRLKANEPKRWFYIQPVFRYP 110


>gi|312111641|ref|YP_003989957.1| prolyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311216742|gb|ADP75346.1| prolyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 567

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 4/104 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++   IR      G   +  P L+ ++ L +           
Sbjct: 34  QSASGVYTFLPLGQRVLQKVEAIIREEMNRAGAVELLMPALQPAE-LWQQSGRWYSYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR 110
           +  L+D   +  +L     ++   L R   +++  +       +
Sbjct: 93  LMRLKDRHERNFALGPTHEEMITTLVRDEVKSYKRLPLTLYQIQ 136



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 20/124 (16%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +      LIT      +       + + LR AG+   ++    +  G +   +D  
Sbjct: 464 WPVAVAPFHVHLITANAKSEEQRQLADEWYEKLRQAGLEV-LYDDRPERAGVKFADSDLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P+ +  G      G++++K    G+                   + +P+ EL+ T+++
Sbjct: 523 GIPVRVTVGKR-AGEGVVEVKVRQTGE------------------SVEVPVHELIDTIQR 563

Query: 488 ILQE 491
           +LQ+
Sbjct: 564 LLQQ 567


>gi|90413553|ref|ZP_01221544.1| prolyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325485|gb|EAS41968.1| prolyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 571

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 47/169 (27%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G   I  P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    N  +              +       
Sbjct: 90  GPELLRFTDRHSRPFVLSPTAEEVVTSLVR----NEISSYKQLPLNLYQIQTKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E        +     K  D        
Sbjct: 146 RFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEYRP 194



 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +  +  +     L  AGI         +  G   K  +    P  I+ G    
Sbjct: 481 MNMAKSEEVKAAAESLYAELTAAGIEVLFDDRKER-PGVMFKDIELIGIPHTIVIGNRSL 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G ++ KD   G +++  + +     + ++A
Sbjct: 540 ENGEMEYKDRRDGNKVAVPVTDVVEMIKQKLA 571


>gi|238787209|ref|ZP_04631008.1| Prolyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724471|gb|EEQ16112.1| Prolyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 572

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR+ GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K+   G++   +      +  +++ 
Sbjct: 520 FADMELIGVPHNIVIGDRNLDSEEVEYKNRRAGEKQMIKTNEIIEFLLSQIK 571


>gi|269958866|ref|YP_003328655.1| prolyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848697|gb|ACZ49341.1| prolyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 425

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 48/157 (30%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++   I   +R   ++ GF  I  P ++ ++ L +     D     
Sbjct: 34  QNASGLYTWLPLGLKVLRGIERIVREEMDSSGFLEILMPSVQPAE-LWRESQRYDSYGLE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEKHGP 122
           +  +QD  G+ +       +  + + R   +++  +       +         R+     
Sbjct: 93  MLRMQDRSGREMVFGPTHEESISDVVRSSLKSYRDLPISLYQMQWKFRDELRPRHGIMRC 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F        D    SA  + + +          +G
Sbjct: 153 REFLMKDAYSFDVDFESAMRSYSNVFSAYLRIFRRLG 189


>gi|184201017|ref|YP_001855224.1| threonyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581247|dbj|BAG29718.1| threonyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 718

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 2/82 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +            + Q LR  GIR E+   S + F  +++ A +   P  +
Sbjct: 574 WLSPVQVRAIPVAEAFNDYLDEFAQTLRERGIRVEVDTSSDR-FPKKIRTASKDKIPFVV 632

Query: 434 IQGTGERSRGMLQIKDLAKGKE 455
           I G  +   G +  +    G +
Sbjct: 633 IAGGEDAEAGTVSFR-FRDGSQ 653


>gi|118586378|ref|ZP_01543828.1| threonyl-tRNA synthetase 1 [Oenococcus oeni ATCC BAA-1163]
 gi|118433195|gb|EAV39911.1| threonyl-tRNA synthetase 1 [Oenococcus oeni ATCC BAA-1163]
          Length = 663

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 52/491 (10%), Positives = 119/491 (24%), Gaps = 95/491 (19%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             E+  G          IR  I D +       G+  + TP++   D   +     D   
Sbjct: 261 NPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNGYMNVYTPVVSNLDLYKRS-GHWDHYR 319

Query: 68  KGVF-SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
             +F ++  +DG+ + LR                             +F +E        
Sbjct: 320 DDMFPAMTANDGEQLELRPMNCPS--------------------HIEIFEHEPRSYRDLP 359

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
             I             A   +  +   TL           +    + IL  I +      
Sbjct: 360 YRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIRDVYH-DF 418

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    L   D  +            +   D++      A L     D+ + +   
Sbjct: 419 GFTDQDYRFRLSYRDPKNT----------KKYYDDDAMWEHAQAALKRAMDDMGLDYFEA 468

Query: 247 DLEKSMHELYE--LVKGTIAGEKGFNELVVIS---ELVRKSGYNSNRIKISSTIVRGLEY 301
           + E + +        K  +  E+  + + +     E         +       ++     
Sbjct: 469 EGEAAFYGPKLDIQFKTALGNEETMSTIQLDFLLPERFDMKYTGEDGKDHRPVLIHRGVV 528

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
            T   + A L                                                  
Sbjct: 529 GTMERFVAFL-------------------------------------------------- 538

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++  +            ++  +++ +      +     L   G R ++     +  G  +
Sbjct: 539 IEKYKGQFPTWLAPVQAVVIPVNYGAHG-DYARNIYSKLMKDGRRIKLD-NRDEKLGYLI 596

Query: 422 KYAD-RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           + A      P  ++ G  E     + ++     +    +I   E      VA  +     
Sbjct: 597 RDAQVNLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKIDEFEEMINDDVANYSKGSE- 655

Query: 481 LVSTVKKILQE 491
               V+++L +
Sbjct: 656 ---KVREMLNK 663


>gi|229155963|ref|ZP_04284064.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228627570|gb|EEK84296.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 639

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 79/264 (29%), Gaps = 23/264 (8%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E    +  +S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEIADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +   +  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+        
Sbjct: 575 DV-RDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVIE-------- 623

Query: 470 RVAQITIPISELVSTVKKILQENK 493
                   ++  V ++K+ ++  K
Sbjct: 624 --------LNGFVESIKEEIKNKK 639



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|42783753|ref|NP_981000.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206969938|ref|ZP_03230892.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218234238|ref|YP_002369371.1| threonyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228923319|ref|ZP_04086607.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954844|ref|ZP_04116864.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228960844|ref|ZP_04122479.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229048283|ref|ZP_04193851.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229072077|ref|ZP_04205286.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229081828|ref|ZP_04214320.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229112040|ref|ZP_04241583.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229129859|ref|ZP_04258825.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147134|ref|ZP_04275493.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229152770|ref|ZP_04280953.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
 gi|229180894|ref|ZP_04308229.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229192776|ref|ZP_04319734.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|229198724|ref|ZP_04325422.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
 gi|296505048|ref|YP_003666748.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|42739683|gb|AAS43608.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206735626|gb|EDZ52794.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218162195|gb|ACK62187.1| threonine--tRNA ligase [Bacillus cereus B4264]
 gi|228584746|gb|EEK42866.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228590615|gb|EEK48476.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228602451|gb|EEK59937.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228630590|gb|EEK87236.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228636383|gb|EEK92854.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653550|gb|EEL09422.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228671363|gb|EEL26664.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228701416|gb|EEL53910.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228711011|gb|EEL62977.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228723008|gb|EEL74385.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228798866|gb|EEM45845.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228804833|gb|EEM51432.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228836273|gb|EEM81626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326100|gb|ADH09028.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|324328469|gb|ADY23729.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 645

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 51/449 (11%), Positives = 112/449 (24%), Gaps = 85/449 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L                       
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVL----------------------- 303

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                + +                                   N           +  + 
Sbjct: 304 ---GSREL----------------------------YETSGHWNHYRDGMFPSMEMDNEE 332

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  +      +R  + G L  +         +R
Sbjct: 333 LVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTM--HRYEMSGALSGL---------QR 381

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSM 252
           +  +   D         +K  L          +    +   E     +S+    D +K  
Sbjct: 382 VRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY---KDFGLENYSFRLSYRDPADTKKYY 438

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    +     G  +         VR        +    L 
Sbjct: 439 ADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLD 496

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    +   V               + +   +     S     +   ++  + +    
Sbjct: 497 FLLPERFELSYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTW 546

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V +  +      L   +     LR AGIR E+     K  G +++ A  +  P  
Sbjct: 547 LAPVQVQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREAQMQKIPYM 604

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  E +   + ++    G++ S  I 
Sbjct: 605 LVVGDNEVTENGVNVR--KYGEQKSETIA 631


>gi|323351205|ref|ZP_08086861.1| threonine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122429|gb|EFX94140.1| threonine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 647

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/400 (11%), Positives = 99/400 (24%), Gaps = 36/400 (9%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+     +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVGLYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++    
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR---- 616

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                         R  +    TIP+ E V  +   +   
Sbjct: 617 --------------RYGQKETHTIPVDEFVEQILADIASK 642



 Score = 46.8 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 22/77 (28%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L       K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVGLY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|228985474|ref|ZP_04145631.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774239|gb|EEM22648.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 639

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 79/264 (29%), Gaps = 23/264 (8%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E    +  +S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEIADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+        
Sbjct: 575 DVRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVIE-------- 623

Query: 470 RVAQITIPISELVSTVKKILQENK 493
                   ++  V ++K+ ++  K
Sbjct: 624 --------LNGFVESIKEEIKNKK 639



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|71083185|ref|YP_265904.1| ATP phosphoribosyltransferase regulatory subunit [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062298|gb|AAZ21301.1| histidine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 350

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 62/347 (17%), Positives = 117/347 (33%), Gaps = 48/347 (13%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETP-LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
           ++ +N     +R++ ++ GF  I+ P ++E +  + +         K +FS  D +G  +
Sbjct: 1   MKSKNLSEKILRSV-KSKGFKYIDLPSVIEANHIVQRSGE---NFRKFIFSFTDQNGSEL 56

Query: 82  SLRYDLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            LR DLT A   RY+  N         + +      N++    R +   +          
Sbjct: 57  CLRPDLTIASCLRYLENNLKGKEKIFYSGQAYRKSNNKRDSIIRDQVGFEIIGS---KDE 113

Query: 141 ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR-- 198
           +  D E+      +L  +        + I N +I + ++ K+ +    KL       R  
Sbjct: 114 KKDDKEIINTALKSLSNLQYSSG--TLKIGNVEIFNLLISKLDIPKRWKLRLSRHFWREE 171

Query: 199 -AIDKLDKFGLQ-GVKLLLGEGRTDNSGDFTKG------ANLTSEQIDIMVSFLSID--- 247
              D L +      V   + E          K       A  + E+I         D   
Sbjct: 172 YFNDLLKRLETNSDVDPTIVEVDKKRYLKMLKDNQQTIVAGRSIEEILKRFDNKIKDPRR 231

Query: 248 ---LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS----------- 293
               +     + E +K      +    L +  +  + +     +   +S           
Sbjct: 232 ASRGKNVSKIIKEFLKINCPIGQAAENLNIFFKKNKINLVVDQKYFPTSLNKIQKLNVEF 291

Query: 294 --TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
             +  R LEYYTG V++  +     N         +V  GGRYD L+
Sbjct: 292 SASFGRQLEYYTGMVFKIDIKSKSKN--------INVINGGRYDKLI 330


>gi|332140465|ref|YP_004426203.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|226731424|sp|B4RV73|SYP_ALTMD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|327550487|gb|AEA97205.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 572

 Score = 63.3 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ N++ + +R      G   +  P+++ +D L +     +  
Sbjct: 31  MIRKLASGLYTWLPSGLRVLNKVANIVREEMNKAGAIEVLMPVVQPAD-LWEESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   L     ++   L R    ++  +       +             
Sbjct: 90  GPELLRVKDRHQRDFVLGPTHEEVITALVRNEISSYKQLPLNLYQVQTKFRDEVRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F            S  E    +M          +G
Sbjct: 150 MRGREFTMKDAYSFHLEDSCLEETYQKMYDAYCAIFSRMG 189



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 40/127 (31%), Gaps = 8/127 (6%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPV-------LITTMDHDSDSLSKYQMYTQMLRT 402
            + IG+SR++ A          IK   P+       +   M          +   + L  
Sbjct: 446 CYGIGVSRIVAAAIEQNHDKFGIKWPDPIAPFKIALIPMNMHKSHRIKEAAEALYEELVA 505

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            GI         +  G      +    P +I+ G        ++ K+   G++   ++  
Sbjct: 506 LGIEVLFDDRKER-PGVMFNDMELIGIPHSIVIGERNLDNQQVEYKNRRTGEKQLLDLSA 564

Query: 463 NESWREA 469
            + +  A
Sbjct: 565 AKEFVAA 571


>gi|332534597|ref|ZP_08410430.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035947|gb|EGI72427.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 574

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 43/160 (26%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   +  G        +R+  ++ + +R   +  G   +  P+++ +D L +     +  
Sbjct: 31  MIRRVASGLYTWLPSGLRVLRKVENIVREEMDKAGAIEMLMPVIQPAD-LWEESGRWNEF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +    D   +  +L     ++     R    ++  +           R     R   
Sbjct: 90  GPELMRFTDRHNRTFALGPTHEEVITDFVRKEISSYKQLPVTLYQVQTKVRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F               +     M     +  E +G
Sbjct: 150 MRAREFTMKDAYSFHLSEECLDATYQAMHKAYCNIFERLG 189



 Score = 50.6 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                Q L+ AG+   +F    +  G      +    P  ++ G        +++K+   
Sbjct: 495 ANNLYQGLKDAGLDV-LFDDRKERPGVMFNDMELIGVPFTLVIGERNLDENKVELKNRRT 553

Query: 453 GKELSREIKN 462
           G++L  +I  
Sbjct: 554 GEKLMIDIDT 563


>gi|302874879|ref|YP_003843512.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307690504|ref|ZP_07632950.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302577736|gb|ADL51748.1| threonyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 635

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/338 (10%), Positives = 91/338 (26%), Gaps = 7/338 (2%)

Query: 141 ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
                       +       ++      +N    +      +  + +  L    + L   
Sbjct: 303 WHQSGHWDHYKENMYFTSIDEKPFAVKPMNCPGSILAYKNALHSYRELPLRLAELGLVHR 362

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
            +L       +++       D++  F     +T E +D++                EL  
Sbjct: 363 HELSGALHGLMRVRC--FTQDDAHIFMTKDQITDELLDLIKLIDDFYKNFGFEYFVELST 420

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                     +  + +  +R +  +   +        G  Y     +          +  
Sbjct: 421 RPENSMGSDEDWELATNGLR-TALDKAGLSYKINEGDGAFYGPKIDFHLRDSIGRTWQCG 479

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPV 378
             +              +     ++ P        G     + +     +      + PV
Sbjct: 480 -TIQLDFQLPERFDIDYIGPDGEKHRPVMVHRVVFGSIERFIGILIEHFAGAFPAWLAPV 538

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M+    S    +   ++L   GIR E  L  ++  G +++ A  +  P  I+ G  
Sbjct: 539 QVKVMNITDSSKGYVEEIARVLEEKGIRVESDL-RNEKIGYKIREAQLQKIPYMIVIGEK 597

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           E +   + ++    G   +  I+   +     +    I
Sbjct: 598 EMNEKTIAVRSRKDGDIGTMSIEEFSNKLLEEIKSKAI 635



 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + D  R I++  G+  I+TP++  S+ L       D   + ++  
Sbjct: 261 GFPFFLPKGMIVRNSLEDYWRVIHKKAGYQEIKTPII-LSEELWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 TSIDEKPFAVKPMNCPG 335


>gi|319426918|gb|ADV54992.1| prolyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 571

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 43/160 (26%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       D+ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWDKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVFRNEK 119
              +   +D   +   L     ++   L R       +    +      +R     R   
Sbjct: 90  GPELLRFKDRHNRDFVLGPTHEEVITDLIRKEVSSYKQLPLNLYQIQTKFRDEVRPRFGM 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             +   A   M    ++ L  +G
Sbjct: 150 MRSREFLMKDAYSFHLDVDTMNEAYEAMYTAYSNILSRMG 189



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 33/126 (26%), Gaps = 21/126 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AGI   +     +  G  
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIEVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  ++ G      G+ + K+   G++                    IP  +
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEK------------------QDIPFDQ 560

Query: 481 LVSTVK 486
           LV  +K
Sbjct: 561 LVDFLK 566


>gi|309389087|gb|ADO76967.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Halanaerobium
           praevalens DSM 2228]
          Length = 643

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 1/108 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +    D +       + L+   IR E+    S+  G +++ A  +  P  +
Sbjct: 535 WMAPVQVEIIPVSDDQIDYAMQVKEELKQEKIRVEVD-SRSEKVGYKIRDAQVKQVPYML 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           I G+ E   G + ++D  +G   +  +   +      +A   I   ++
Sbjct: 594 IVGSREEDNGTVSVRDRREGDLGTSNLAEFKENILEEIAAKNINTEDI 641



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RGF     K + +RN ++D  +  +   G++ I+TP++   +SL       D     ++ 
Sbjct: 261 RGFPFFHPKGMALRNALVDFWKEEHYQAGYEEIQTPII-LDESLWHQSGHWDHYQDNMY- 318

Query: 73  LQDDDGQWISLRYDLTAP 90
               D +  +++      
Sbjct: 319 FTKIDEEAHAVKPMNCPG 336


>gi|332653846|ref|ZP_08419590.1| threonine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516932|gb|EGJ46537.1| threonine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 589

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +LD  R I++ YG+  I TP++       +     D   + +++ 
Sbjct: 212 GFPFFLPKGMTLKNTLLDYWRQIHKKYGYVEISTPIILNRQLWERS-GHWDHYKQNMYTT 270

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 271 VI-DGEDFAIKPMNCPG 286



 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +     + +     ++ L  AG R E     ++  G +++ A     P  I
Sbjct: 485 WLAPVQVKILPVTDRAAAYADQLSKQLDEAGYRVETDH-RNEKIGKKIREATMEKIPYMI 543

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  +     + ++ L  G+
Sbjct: 544 VVGDRDMENNTVSVR-LRTGE 563


>gi|324326401|gb|ADY21661.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 639

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 79/264 (29%), Gaps = 23/264 (8%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E    +  +S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLNCKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEIADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +   +  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+        
Sbjct: 575 DV-RGEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVIE-------- 623

Query: 470 RVAQITIPISELVSTVKKILQENK 493
                   ++  V ++K+ ++  K
Sbjct: 624 --------LNGFVESIKEEIKNKK 639



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|30022651|ref|NP_834282.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|29898209|gb|AAP11483.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 646

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/449 (11%), Positives = 112/449 (24%), Gaps = 85/449 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L                       
Sbjct: 268 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVL----------------------- 304

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                + +                                   N           +  + 
Sbjct: 305 ---GSREL----------------------------YETSGHWNHYRDGMFPSMEMDNEE 333

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  +      +R  + G L  +         +R
Sbjct: 334 LVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTM--HRYEMSGALSGL---------QR 382

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSM 252
           +  +   D         +K  L          +    +   E     +S+    D +K  
Sbjct: 383 VRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY---KDFGLENYSFRLSYRDPADTKKYY 439

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    +     G  +         VR        +    L 
Sbjct: 440 ADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLD 497

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    +   V               + +   +     S     +   ++  + +    
Sbjct: 498 FLLPERFELSYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTW 547

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V +  +      L   +     LR AGIR E+     K  G +++ A  +  P  
Sbjct: 548 LAPVQVQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREAQMQKIPYM 605

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  E +   + ++    G++ S  I 
Sbjct: 606 LVVGDNEVTENGVNVR--KYGEQKSETIA 632


>gi|288958966|ref|YP_003449307.1| prolyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911274|dbj|BAI72763.1| prolyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 437

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  +I   +R   +  G   +  P ++ +D L +     D  
Sbjct: 31  MIRQTSAGIYAWLPLGYRVLRKIEQIVREEQDAAGAQELLMPTIQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            K +  + D   + +       ++   + R   +++  +       +  
Sbjct: 90  GKEMLRITDRHDREMLFGPTNEEMITDIFRSFVKSYRQLPLNLYHIQWK 138


>gi|317052052|ref|YP_004113168.1| prolyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316947136|gb|ADU66612.1| prolyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 572

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/106 (10%), Positives = 31/106 (29%), Gaps = 4/106 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  +I + IR      G + +  P    ++   +      +    
Sbjct: 34  KTAAGIYSYLPLAWRVLRKIENIIREEMTREGAEELMMPAALPAELWMES-GRWQKYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +   QD  G+   +     +    + R+   ++  +       +  
Sbjct: 93  LLRFQDRHGRDFCIGPTHEEAITDIVRHAVSSYRHLPKNLYQIQTK 138


>gi|254483545|ref|ZP_05096771.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214036202|gb|EEB76883.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 580

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  ++ + +R      G   +  P+++ ++ L +     ++    
Sbjct: 44  KLAAGLYSWLPLGLRVLRKVENVVREEMNAAGAQEVSMPVVQPAE-LWQESGRWEQYGSE 102

Query: 70  VFSLQDDDGQWISLRY 85
           +  +QD   +   L  
Sbjct: 103 LLRIQDRHQRDFCLGP 118



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 19/111 (17%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M       +  +     L++ G+   +   + +  G +    +    P  I+ G    
Sbjct: 489 LNMQKSEAVANCAEALYANLQSVGVDVLLDDRNER-PGVKFADMELIGIPHRIVIGDRAL 547

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           + G ++ K                  R    +Q+ IP  ++VS +++ L+ 
Sbjct: 548 AEGQIEYK-----------------GRRDEDSQL-IPQEDIVSFLQEQLRS 580


>gi|329939431|ref|ZP_08288767.1| threonyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329301660|gb|EGG45554.1| threonyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 666

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D       +   LR  GIRAE+     +    +++ A ++  P   
Sbjct: 559 WLAPVQVVGIPIREDHADYLAEFVAKLREHGIRAEVDHSDDR-MQKKIRTAQQQKIPFMA 617

Query: 434 IQGTGERSRGMLQIKDLAKGKEL 456
           I G  + + G +  +    G + 
Sbjct: 618 IAGDDDVNGGTVSFRY-RDGSQR 639


>gi|260430967|ref|ZP_05784938.1| prolyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414795|gb|EEX08054.1| prolyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 446

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/463 (10%), Positives = 125/463 (26%), Gaps = 69/463 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  ++ + +       G  PI+ P+L+ +D L +     D  
Sbjct: 31  MIKQAAAGIYSWLPLGFKVLRKLENIVHEEQIRAGHIPIQMPILQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  ++D  G+ +       +L   + R    ++  +      Y+I   FR+E     
Sbjct: 90  GQEMLRMKDRHGRDMLYTPTAEELVTDIFRGHVSSYKDLP--LTLYQIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFYM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A+    ++     +
Sbjct: 180 SYLRTYERMGLQAI------------PMRADSGPIGGDDTHEFLVLADTGESEV----FY 223

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY---NSNRIKISSTIVRGLE 300
            S   +  + +           +    E   +     ++          +      RG+E
Sbjct: 224 DSAVTDIRLGQRDIDYDDKAQCQAIMEEFTSLYARTDETHDEALFQQVPEERRRSARGIE 283

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
                 +      P+    Q P            DG        +       +  + +  
Sbjct: 284 VGQIFYFGTKYSEPMGATVQGP------------DGKQVPVHMGSHGIGVSRLIGAIIEA 331

Query: 361 ALKSLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFG 418
           +                  I  +   D ++ +      + L   G+  E ++   ++  G
Sbjct: 332 SHDDKGIIWPEGVTPFHCGIVNLKQGDDEADAACDKIYKALTALGL--EPLYDDRNERAG 389

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +    D    P  I  G      G++++     G+      +
Sbjct: 390 GKFATMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEELSPE 432


>gi|119485182|ref|ZP_01619567.1| threonyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119457410|gb|EAW38535.1| threonyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 608

 Score = 63.3 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +    + L+  Q   + +R+  IRAE+   S +  G Q++ A++   P+  
Sbjct: 506 WLAPIQVRLLAVSDEFLTYTQEVVEKMRSLDIRAEVD-RSRERLGKQIRNAEKEKIPVMA 564

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           I G  E     L I+  A G+  +  +       +  +A   
Sbjct: 565 IIGAKEVEANSLSIRTRASGELGTLPVDEVCQRIQNAIANFE 606



 Score = 37.5 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   +R+ + D ++      G+ P+ TP +   D   K      +  + +F
Sbjct: 222 GLPLWTPKGTVLRSTLEDFLKKEQLKRGYLPVVTPHIGRIDLF-KASGHWQQYREDMF 278


>gi|320352952|ref|YP_004194291.1| prolyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320121454|gb|ADW17000.1| prolyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 570

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 43/131 (32%), Gaps = 6/131 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G             ++ + +R      G   I  P+++  D L +      +    
Sbjct: 34  KLTSGMYTYLPMGFLALQKVTEIVRQEMNRAGAQEILMPMVQPGD-LWEESGRWKKYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +   +D   +   L     ++   +AR   +++  +      Y+I   FR+E        
Sbjct: 93  LLRFRDRHDRDYCLGPTHEEVVTDVARRELQSYRQLP--INLYQIQTKFRDEIRPRFGLM 150

Query: 127 QFIQCDVDNVG 137
           +  +  + +  
Sbjct: 151 RGREFVMKDAY 161



 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 34/105 (32%), Gaps = 1/105 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +     +++     D    +  +     LR  G+   +     +  G++   AD 
Sbjct: 462 IFPVPLAPFQVIVLNLGPKDEGYCTAAEDLYTQLRAQGLDVLLDDRDER-PGSKFADADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
              P  +  G      G ++I+    G+     ++   ++   RV
Sbjct: 521 LGIPYRLTVGKTFEKEGKVEIRSRKTGETQVLSLEEATAYLAERV 565


>gi|222475082|ref|YP_002563497.1| prolyl-tRNA synthetase (proS) [Anaplasma marginale str. Florida]
 gi|254994925|ref|ZP_05277115.1| prolyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
 gi|255003060|ref|ZP_05278024.1| prolyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|222419218|gb|ACM49241.1| prolyl-tRNA synthetase (proS) [Anaplasma marginale str. Florida]
          Length = 425

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 46/157 (29%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++   I   +R   ++ GF  I  P ++ +D L +     D     
Sbjct: 34  QNASGLYTWLPLGLKVLRTIEHIVREEMDSSGFLEILMPSVQPAD-LWRESLRYDSYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEKHGP 122
           +  +QD  G+ +       +  + + R   +++  +       +         R+     
Sbjct: 93  MLRMQDRSGREMVFGPTHEEAISDVVRSSLKSYRDLPINLYQIQWKFRDELRPRHGIMRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F        D     A  +   +          +G
Sbjct: 153 REFLMKDAYSFDVDFEGAMRSYENVFSAYFRIFRRLG 189


>gi|224373691|ref|YP_002608063.1| ATP phosphoribosyltransferase regulatory subunit [Nautilia
           profundicola AmH]
 gi|223589263|gb|ACM92999.1| tRNA synthetase, class II [Nautilia profundicola AmH]
          Length = 271

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ ++P+G      KE +I+  I +    ++E   F+ I +P   Y          E   
Sbjct: 3   LKHDIPQGAKLYFGKEAKIKREIENIAAEVFEILEFEEIVSPFFSYHQL-------EALD 55

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            K +    D+  + ++LR D +  + R V +   +     + + I PVFR   +   +
Sbjct: 56  EKELIRFTDEKNRSLALRGDSSIDVIRLVIKRLKSEAK--KWFYIQPVFRAPSNEMYQ 111


>gi|302871393|ref|YP_003840029.1| threonyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574252|gb|ADL42043.1| threonyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 639

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 75/262 (28%), Gaps = 6/262 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
             T +        +   ++I  ++  +         + +  +        G +E   ++E
Sbjct: 380 CFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFGFKYHVELSTRPENSMGTDEQWNMAE 439

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
              K       I        G  Y     +          +     +        R+D  
Sbjct: 440 TALKEALEEVGINYKINEGDGAFYGPKIDFHLEDSLKRTWQ--CATIQLDFQMPERFDLY 497

Query: 338 VSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                G             G     +A+ +   +      + P  I  +    +      
Sbjct: 498 YIGEDGAKHRPVMLHRVVFGSIERFIAILTEHFAGAFPVWLAPTQIRVIPVSDNFNDYAA 557

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             +Q L+  G R E     S+  G +++ A  +  P  +I G  E+    + ++D  KG 
Sbjct: 558 KISQTLKENGFRVEEDY-RSETVGYKIRDAQLQKIPYMVIVGEKEQKENTIAVRDRKKGD 616

Query: 455 ELSREIKNNESWREARVAQITI 476
             S  I    S  + +V +  I
Sbjct: 617 LGSFTIDEFVSMVKEKVEKKVI 638



 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  ++  G+  I+TP++   D   +     D   + ++  
Sbjct: 264 GFPFFLPKGMIIRNILEDFWREEHKRRGYQEIKTPIMLTKDLWIQS-GHWDHYKENMY-F 321

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q  +++      
Sbjct: 322 TKIDDQEFAIKPMNCPG 338


>gi|296270051|ref|YP_003652683.1| threonyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296092838|gb|ADG88790.1| threonyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 657

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 54/480 (11%), Positives = 118/480 (24%), Gaps = 105/480 (21%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  + D  R  +E  G+  + TP +   + L +     +     +F 
Sbjct: 278 SGLPVFHPKGGTIRRIMEDYSRRRHEEAGYSFVNTPHI-TKEKLYQISGHLNWYADAMFP 336

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G    L+             +        R+YR  P+   E     R+ +     
Sbjct: 337 PMELEGARYYLKPMNCP-------MHNLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVH 389

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK-IGLHGDDKLN 191
                      DA +                        R  L  +L   + L  D  LN
Sbjct: 390 GLTRVRGLTQDDAHIY-----------------CTQEQMRDELRSLLRFVLDLLRDFGLN 432

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +  + L   D     G   V         + +        L           +S+    +
Sbjct: 433 DFYLELSTKDPEKYVGSDEVWEEATRTLREVAEAENLELVLDPGGAAFYGPKISVQARDA 492

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           +   ++              +  I              + +    +        ++ +I 
Sbjct: 493 IGRTWQ--------------MSTIQLDFNLPELFELEYQAADGTRKRPVMIHRALFGSIE 538

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F  +  +     F                                              
Sbjct: 539 RFFGVLVEHYAGAFPPWLA----------------------------------------- 557

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                PV +  +      +   Q   + LR   IR E+     +    +++ A +   P 
Sbjct: 558 -----PVQVVGIPITEAHVPYLQDVAKRLRERRIRVEVDASDDR-MQKKIRNAQKAKVPY 611

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            ++ G  + + G +  +    G++ +                  +PI + +  +   ++ 
Sbjct: 612 MLLAGDKDVAAGAVSFRY-RNGEQKNG-----------------VPIDQAIEEIVSAVER 653


>gi|257865201|ref|ZP_05644854.1| predicted protein [Enterococcus casseliflavus EC30]
 gi|257871526|ref|ZP_05651179.1| predicted protein [Enterococcus casseliflavus EC10]
 gi|257799135|gb|EEV28187.1| predicted protein [Enterococcus casseliflavus EC30]
 gi|257805690|gb|EEV34512.1| predicted protein [Enterococcus casseliflavus EC10]
          Length = 533

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 108/290 (37%), Gaps = 36/290 (12%)

Query: 27  NRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYD 86
            ++   +R +Y  + F P  +   E   +  +   D+      + +    DG+ ++L+ D
Sbjct: 26  EQVELKLRKLYTQHHFSPYHSNNFEEYRNYQQN--DQFLRGSSIITFTGTDGRTMALKPD 83

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
           +T  +A       +T     R          +    G +++  Q  ++ +         E
Sbjct: 84  VTLSIA------KNTPSGEARRVYYVEDVYRQDRQAGEYQKIDQIGLELIDQITWEDQLE 137

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  +  ++L  VG       + +++  ILDGI ++       K                 
Sbjct: 138 VVKLAWESLAQVG----KGTLDLSHMGILDGICQRFPEADRQK----------------- 176

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIA 264
               V   L +  +      T+ A L++ + + +     LS D E    +  EL+     
Sbjct: 177 ----VLHCLRDKSSHGMDALTEKAGLSATEAEKLAKLVRLSGDFETKYQKAKELLAEYPQ 232

Query: 265 GEKGFNELVVISELVRKSG-YNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
            + G  EL  + + ++K     S RI++  +I+   +YY+G +++  +  
Sbjct: 233 AQAGLAELKQLYQALQKEQLSASIRIRLDFSILNDADYYSGLLFQGFIEE 282


>gi|170754255|ref|YP_001782772.1| threonyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|229557978|sp|B1IMV3|SYT_CLOBK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169119467|gb|ACA43303.1| threonyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 635

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/368 (12%), Positives = 98/368 (26%), Gaps = 14/368 (3%)

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
              +R E    G         ++                M  T    G            
Sbjct: 277 ESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDGDYAIKPMNCPGG 336

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
             +    +         +L+E  IV R        GL  V+        D++  +     
Sbjct: 337 ILVYKNSMHSY-RDLPLRLSELGIVHRHELSGALHGLMRVR----CFTQDDAHLYMTKEQ 391

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           +  E + I+                EL            +  + +  +++     + I  
Sbjct: 392 IKEEVVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLKE---ALDSIGK 448

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT-- 349
              +  G   + G   +  L   +    Q   +        R+D       G+       
Sbjct: 449 EYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMV 508

Query: 350 --GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                  + R I  L    +       + PV +  M+         +   + L+   IR 
Sbjct: 509 HRTIYGSVERFIGILIEQYAGAFP-TWLAPVQVKLMNITDAQYDYLKKVEETLKENNIRV 567

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E+    ++  G +++ A  +  P  +I G  E   G + ++    G   +  ++      
Sbjct: 568 EID-TRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKI 626

Query: 468 EARVAQIT 475
           +  +   T
Sbjct: 627 KNEIKAKT 634



 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  +   G+  I TPL+  +++L       D   + ++  
Sbjct: 261 GFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLI-LNEALWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 319 TNIDDGDYAIKPMNCPG 335


>gi|54310060|ref|YP_131080.1| prolyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81828683|sp|Q6LN48|SYP_PHOPR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|46914499|emb|CAG21278.1| putative prolyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 571

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 47/169 (27%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G   I  P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    N  +              +       
Sbjct: 90  GPELLRFTDRHSRPFVLSPTAEEVVTSLVR----NEISSYKQLPLNLYQIQTKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E        +     K  D        
Sbjct: 146 RFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEYRP 194



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +  +  +     L  AGI   +F    +  G   K  +    P  I+ G    
Sbjct: 481 MNMAKSEEVKAAAESLYAELTAAGIEV-LFDDRKERPGVMFKDIELIGIPHTIVIGNRSL 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G ++ KD   G +++  + +     + ++A
Sbjct: 540 ENGEMEYKDRRDGNKVAVPVADVVEMIKQKLA 571


>gi|257055068|ref|YP_003132900.1| prolyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256584940|gb|ACU96073.1| prolyl-tRNA synthetase, family II [Saccharomonospora viridis DSM
           43017]
          Length = 586

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 2/100 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +     D       +     L   G+R  +        G +  
Sbjct: 474 DELGLVWPRSVAPADVHVVIAGKDDAVTEGGERLAAQLAERGVRVLLD-DRKATPGVKFA 532

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            A+    P  ++ G    ++G++++KD A G+     + +
Sbjct: 533 DAELIGVPTIVVVG-RGLAKGVVEVKDRATGERTEVAVDS 571



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +R+   +   +R   +  G   I+ P L   E  ++ G++          +F L 
Sbjct: 44  WLPLGLRVLRNVEAIVREEMDAIGAQEIQFPALLPKEPYETTGRWTE----YGPSLFRLV 99

Query: 75  DDDGQWISLRY 85
           D  G    L  
Sbjct: 100 DRKGADYLLGP 110


>gi|255004184|ref|ZP_05278985.1| prolyl-tRNA synthetase [Anaplasma marginale str. Virginia]
          Length = 425

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 45/157 (28%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++   I   +R   ++ GF  I  P ++ +D L +     D     
Sbjct: 34  QNASGLYTWLPLGLKVLRTIEHIVREEMDSSGFLEILMPSVQPAD-LWRESLRYDSYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEKHGP 122
           +  +QD  G+ +       +  + + R   +++  +       +         R+     
Sbjct: 93  MLRMQDRSGREMVFGPTHEEAISDVVRSSLKSYRDLPINLYQIQWKFRDELRPRHGIMRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F        D        +   +          +G
Sbjct: 153 REFLMKDAYSFDVDFEGVMRSYENVFSAYFRIFRRLG 189


>gi|86146905|ref|ZP_01065224.1| prolyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835357|gb|EAQ53496.1| prolyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 546

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 47/169 (27%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G   I  P+++  + L +     ++ 
Sbjct: 6   MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFE-LWEETGRSEKM 64

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    N  +              +       
Sbjct: 65  GPELLRFTDRHSRPFVLSPTAEEVVTSLVR----NEISSYKQLPLNLYQIQTKFRDERRP 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E        +     K  D        
Sbjct: 121 RFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEYRP 169



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L   GI   +F    +  G   K  +    P  I+ G    
Sbjct: 456 MNMHKSERVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFKDIELVGIPHTIVIGDRSM 514

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G + +  +        A++A
Sbjct: 515 DEGNFEYKNRRTGDKEAIAMDTVIEHLTAQLA 546


>gi|20093982|ref|NP_613829.1| threonyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|22654113|sp|Q8TXW5|SYT_METKA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19886944|gb|AAM01759.1| Threonyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 624

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 86/288 (29%), Gaps = 23/288 (7%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS---FLS 245
           K+ E     R     +  GL+ ++            D  +      EQ  + +     L 
Sbjct: 309 KIYELSQSFRLEQSGEVVGLKRLRAFTMPDLHTVCADMDEAVEEFLEQAKLCLEVGLDLG 368

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           ++ E       + +K      +    L  ++E + K+  ++  + +     R   +    
Sbjct: 369 LEYEVVFRTTEKFLK------ERKEVLEELAEAMEKAYGDAKPVLVEVLPERKHYWECKV 422

Query: 306 VYEAILGFPVMNEKQ---KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
            +  I       E       V  G   G    D          +  +        +   L
Sbjct: 423 DFAFIDSLGRPIENPTVQIDVESGRRFGITYADESGDERHPVILHCSPTGSLERVICAIL 482

Query: 363 K-------SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           +                  + PV    +      L + +   + L++ G R ++     +
Sbjct: 483 EGQYKRFEQEGKLPTLPTWLSPVQARVIPVSEKVLEEAEKVFEELKSEGFRVDLD-DRDE 541

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGM--LQIKDLAK-GKELSREI 460
             G +++ A     P  I+ G  E  +G   + I++ +   ++   E+
Sbjct: 542 PVGRKIRDAGEEWVPYVIVIGEEEVKKGTLSVTIREESTLKEQRREEM 589


>gi|306820889|ref|ZP_07454509.1| threonine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551003|gb|EFM38974.1| threonine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 641

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  +E  G+D I+TP++  +++L       D   + ++  
Sbjct: 261 GFPFFHPKGMVLRNTLEKFWREEHEKAGYDEIKTPII-LNEALWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              DG+  +++             +  +    P R   +G V R+E  G   
Sbjct: 319 TKIDGEDYAIKPMNCPGSILTYKTHLFSYRDLPLRWAEMGQVHRHELSGALH 370



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      +         L+  GIR  +    ++  G +++ A     P  +
Sbjct: 534 WLSPVQVKILPISDKFIDYAYEVQSELKKLGIRVNVD-ARAEKIGFKIREAQLEKVPYML 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E     L ++    G   S + +         + +  I
Sbjct: 593 VIGEKEVENNTLSVRSRDLGDLGSMKKEEVIEKFVKEIEEKKI 635


>gi|195505447|ref|XP_002099508.1| GE10941 [Drosophila yakuba]
 gi|194185609|gb|EDW99220.1| GE10941 [Drosophila yakuba]
          Length = 1590

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 66/479 (13%), Positives = 130/479 (27%), Gaps = 48/479 (10%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            +   +   + N++  +G   +++PLL                N     L    G  + L 
Sbjct: 970  VIEFVKAKVVNLFRKHGAIEVDSPLLSPL----SARNSSANANANAVHLMTHSGCVVVLP 1025

Query: 85   YDLTAPLARYVAEN--FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
             DL    AR+V  N       +            N          F            + 
Sbjct: 1026 CDLRTQFARHVTMNSVNLIRRYCVDRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDA 1085

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +   +   L  +  K  +  I +N+  +L  IL    +            +  I+ 
Sbjct: 1086 ELLSLAFEITSELPRLREK--NLAIRMNHTNLLRAILIFCNVPKAQYGALFENTMDFIES 1143

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                      +     ++  S        L +  +    S +     KS+          
Sbjct: 1144 RISRFQFHSSITGIMEKSRTSAQTLMDMLLANFLLTGSRSTVDDSALKSLMRGKGEAASL 1203

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              G     EL  +  L    G    +  I       + +        +       +  + 
Sbjct: 1204 ARG--ALRELETVVGLAYSLG---VKCPIHIWAGLPISFDRASNGGIVWQMTADLKPNRS 1258

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNV---PATGFSIGISRLIV------ALKSLESSTNNIK 373
                 +  G RYD ++  F+ Q     PA      +S   +       + ++        
Sbjct: 1259 GHPSVLAIGERYDSMLHEFQKQAQKFNPAMPARGVLSGAGLTFSLDKLVAAVGVEYAKDC 1318

Query: 374  EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG--NQLKYADRRNCPL 431
                V I         L       ++L + GIR  +   ++   G   Q   A R     
Sbjct: 1319 RAIDVGICVCGTRP-PLKDVTYIMRLLWSVGIRCGIV-EAASELGDEAQ-DLA-RLGALH 1374

Query: 432  AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
             I+        G L+++                S+   R  +  +  +ELV  ++K+L+
Sbjct: 1375 VILVAE----NGSLRVR----------------SFERERFQERHLTRTELVEFIQKMLR 1413


>gi|148244637|ref|YP_001219331.1| ATP phosphoribosyltransferase regulatory subunit [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326464|dbj|BAF61607.1| ATP phosphoribosyltransferase regulatory subunit [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 316

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 65/150 (43%), Gaps = 6/150 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +LP    +    +  +   +   + ++Y + GF  +  P++E+ +SL       D  ++ 
Sbjct: 3   QLPESIEELTNDQALVFESLRRHLLDLYADKGFGLVIPPMVEHVNSLLLT---NDVVDEK 59

Query: 70  VFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            F   D + G+ + +  D+T  +AR  A+     V   +   I  + + +       R  
Sbjct: 60  TFKFLDPNSGKMLGVHADITPQIARIDAKRGSDSVE--KYCYINSILKTKADDFYASRSP 117

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           IQ   +  GS A  +D E+  +M ++L+ +
Sbjct: 118 IQAGAELYGSDATESDVEVIELMLESLKLL 147


>gi|315657037|ref|ZP_07909922.1| proline--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492429|gb|EFU82035.1| proline--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 623

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 37/112 (33%), Gaps = 2/112 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +     D +  +  +     L  AG++         + G + K
Sbjct: 488 DDRGLMWPLNIAPFQVHVLATGKDPEIFATAEKLACQLDAAGLQVLYDDRPKASAGVKFK 547

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARVAQ 473
            A+    P A++ G G  + G ++I+   +G  + +      E   +A   +
Sbjct: 548 DAELLGMPYALVVGKG-LAEGKVEIRQRREGTTQETTPESCVEELLQAIEKE 598



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        ++   R+ + +R   +  G   ++ P+L  S+         +     +F L
Sbjct: 40  GIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPMLLSSEPYVATN-RWEEFGPSLFKL 98

Query: 74  QDDDGQWISLRY 85
           +D       L  
Sbjct: 99  KDRKEGDYLLAP 110


>gi|315918544|ref|ZP_07914784.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059560|ref|ZP_07924045.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685236|gb|EFS22071.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313692419|gb|EFS29254.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 569

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 12/164 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   ++ + IR   +  G   +  P+L+ ++ L +     +  
Sbjct: 31  MIKKLASGLYTYLPLGFRTLKKVENIIREEMDRAGSQELLMPVLQPAE-LWQESGRWNVM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
            + +  L+D   +   L     ++   + R    ++ ++      Y I    R+E+    
Sbjct: 90  GEEMVRLKDRHQRDFVLGPTNEEVITDIVRNDISSYKSLP--INLYHIQTKVRDERRPRF 147

Query: 120 --HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  F             S +     M        E  G+K
Sbjct: 148 GLMRSREFIMKDAYSFHTSQESLDEEFENMKNTYTRIFERCGLK 191



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 23/128 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
                   +      V +   +  +++ +   +   + L    + A +        F   
Sbjct: 459 DEHGIIWPSALAPYLVDVIPANIKNAEQMQLAEKIYEQLNAEHLDAMLDDRDERPGFK-- 516

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            K AD    P  +I G    +  ++++K    G+                     IP+ E
Sbjct: 517 FKDADLIGFPFKVICGKK-AAENIVELKIRKTGE------------------TFEIPVDE 557

Query: 481 LVSTVKKI 488
           ++S +K +
Sbjct: 558 IISKIKDL 565


>gi|307200699|gb|EFN80796.1| Threonyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 691

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 22/129 (17%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     +++       +         Q L  AGI  E+ +  + +F  +++ A 
Sbjct: 578 GKWPFWLSPRQAMVVPVASQLDE---YAYQVKQKLWDAGIMVEIDVDPNDSFNKKIRNAQ 634

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                  ++ G  ER+ G + I+                      V    + + +L+  +
Sbjct: 635 LAQFNFILVVGEKERNAGTVNIR------------------TRDNVVHGEMGVEDLIEKL 676

Query: 486 KKILQENKE 494
           K IL+E K+
Sbjct: 677 K-ILKETKD 684



 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR+ Y   GF  + +P + Y+  L +         + +FS  D +
Sbjct: 314 FQPRGAYIYNTLIDFIRSEYRKRGFQEVISPNI-YNSKLWQVSGHWQHYAENMFSF-DVE 371

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 372 KETYALKPMNCPG 384


>gi|304389734|ref|ZP_07371693.1| proline--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326910|gb|EFL94149.1| proline--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 623

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 37/112 (33%), Gaps = 2/112 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +     D +  +  +     L  AG++         + G + K
Sbjct: 488 DDRGLMWPLNIAPFQVHVLATGKDPEIFATAEKLACQLDAAGLQVLYDDRPKASAGVKFK 547

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARVAQ 473
            A+    P A++ G G  + G ++I+   +G  + +      E   +A   +
Sbjct: 548 DAELLGMPYALVVGKG-LAEGKVEIRQRREGTTQETTPESCVEELLQAIEKE 598



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        ++   R+ + +R   +  G   ++ P+L  S+         +     +F L
Sbjct: 40  GIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPMLLSSEPYVATN-RWEEFGPSLFKL 98

Query: 74  QDDDGQWISLRY 85
           +D       L  
Sbjct: 99  KDRKEGDYLLAP 110


>gi|283769476|ref|ZP_06342372.1| proline--tRNA ligase [Bulleidia extructa W1219]
 gi|283103744|gb|EFC05130.1| proline--tRNA ligase [Bulleidia extructa W1219]
          Length = 561

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 72/520 (13%), Positives = 136/520 (26%), Gaps = 83/520 (15%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK+        G        +++ N+I   I+   E      +  P L   +      
Sbjct: 31  MIKKSST------GVYMILPMGLKVFNKIKSIIQEEMEAIHCQELLMPSLIPEEVYVASG 84

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGP 113
             E      +FSL+D   Q   L     +L A  A    R   +   +I      +R  P
Sbjct: 85  RREG-FGSDMFSLKDRKNQNYVLGPTHEELFATAAKLKIRSYKDMPFSIYQIQTKFRDEP 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG-------------- 159
             R        F+       D   +  +++  +      +  + +G              
Sbjct: 144 RPRYGLIRVREFQMKDAYSFDANEAGMDSSYNKQFQAYKNIFDRLGLNYVVVKADTGVMG 203

Query: 160 ----------IKRNDYHIGINNRKILDGILEKI-GLHGDDKLNERLIVLRAIDKLDKFGL 208
                         +  + +N        LE    L  D    E    +  +  + +  +
Sbjct: 204 GLLSEEFQALSPVGEDTLALNEDGSYAANLEVATCLPEDFNSTEEKKTMIKVATVGQHSI 263

Query: 209 QGVKLLLGEGRTDNSGDFTKGA---------------NLTSEQIDIMVSFLSIDLEKSMH 253
           + V                  A               N +  Q  +    L +   + + 
Sbjct: 264 EDVANFFHIDPKRTVKTLCYEADDQLVVVLVRGDREVNESKVQKALRCFSLELASSEKVE 323

Query: 254 ELYEL---------VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL----- 299
           +L+           +K TI  ++    L        + GY+   +  S   V        
Sbjct: 324 DLFHCPFGSLGPIGLKATILADEEIKLLRNFVVGANEDGYHYCDVNPSDFEVSQYGDFRQ 383

Query: 300 -----EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
                   +G  +        +    K     S     +Y    ++ +   +   G    
Sbjct: 384 IQEGDRCPSGQGFIHFEKGIEVGNTFKLGTKYSKAMDLQYSNANNQLEYVWMGCYGIGP- 442

Query: 355 ISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            +R + AL          +   N+      +      D   +         LR AGI   
Sbjct: 443 -ARAMAALVEQNYDENGINWPKNLAPYRCSITIISMKDDQQIQVANDLYDQLRKAGIDVL 501

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +     +  G + K  D    P  I  G      G ++IK
Sbjct: 502 LDDRDER-PGVKFKDMDLIGIPTQITVGKN-VVDGQVEIK 539


>gi|117919846|ref|YP_869038.1| prolyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|152016600|sp|A0KV13|SYP_SHESA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117612178|gb|ABK47632.1| prolyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 570

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       D+ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWDKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHNRDFVLGP 108



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 28/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L   GI   +     +  G  
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAVGIDVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      G+ + K+   G++          + +   A
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPFDQIVDFLKNLQA 570


>gi|331220010|ref|XP_003322681.1| PEK/GCN2 protein kinase [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309301671|gb|EFP78262.1| PEK/GCN2 protein kinase [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1564

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 69/471 (14%), Positives = 147/471 (31%), Gaps = 80/471 (16%)

Query: 26   RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRY 85
            R  I D +   +   G   +E+P+L         +P  D  N  +  L D +G  ++L +
Sbjct: 988  RTLICDHLTEKFCLRGAVNVESPVL---------VPYTDIDNPSLVKLLDSEGTVVTLHF 1038

Query: 86   DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA 145
            D T P AR VA   D  +   + + + P++R +    G+         D V  +   A  
Sbjct: 1039 DATIPFARTVA--RDESLIRLKRFSLSPMYR-QNPAGGQPITIPVSSFDIVSPTRTLAAE 1095

Query: 146  E---MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                + + + D L ++      +   +++ K+ D I   I  H    L + +    A   
Sbjct: 1096 SDLPIILDLDDALRSL-PLGESFEHVLSHNKLWDAIFSDIPAHQRTPLAKMIGNYNATSS 1154

Query: 203  LDKFGL----------------QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                 L                   K     GR          ++ T++ + + +   +I
Sbjct: 1155 PSWSELSTELADSSGISKRTLENIKKTFDIRGRFHQLYQTIFISHFTNDLVLLRLKLGTI 1214

Query: 247  DLEK-SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            ++ K  +             ++  ++L ++ +  +  G     +     + +  +   G 
Sbjct: 1215 EVVKAHLLGSCSPTYNNFNVQEAIDDLELVIKYAKLLGMQGAVVIWPMLVPQHRDNSNGV 1274

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
             +                    +  GGR+DGLV +                     L + 
Sbjct: 1275 FFNTCDTRKGK----------VLAAGGRFDGLVQK---------------------LIAP 1303

Query: 366  ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--NFGNQLKY 423
                + ++       +T                         EM+ G ++  +    L+ 
Sbjct: 1304 GLGQSQLRSHLSCSCSTCTDVKRYRLDAP-------------EMYDGETQWSSPEAALQS 1350

Query: 424  ADRRNCPLAIIQ-GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              R     AII          ++++K L++  E    +     W E  + +
Sbjct: 1351 CRREGIIYAIIVKAPNPYKDQVVKVKSLSQKAEHEVPLHELCPWLEDALQE 1401


>gi|139439769|ref|ZP_01773160.1| Hypothetical protein COLAER_02191 [Collinsella aerofaciens ATCC
           25986]
 gi|133774919|gb|EBA38739.1| Hypothetical protein COLAER_02191 [Collinsella aerofaciens ATCC
           25986]
          Length = 573

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I + +R+  +  G   +  P++  ++ L +     D   K +   
Sbjct: 42  GLYSYLPLAWRSIRKIENIVRDEMDAAGAQELMMPIMVDAE-LWRESGRIDAYGKELVRF 100

Query: 74  QDDDGQWISLRY 85
            D  G+   L  
Sbjct: 101 DDRHGREFVLGP 112



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 41/135 (30%), Gaps = 24/135 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  +D    +  +  +     L   GI   +     +      
Sbjct: 460 DEHGIVWPVSVAPYEVAVIPLDPKKEECATVCEQIVDGLCAEGIEVVVDDRDERP---GF 516

Query: 422 KYADR--RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+AD      P  ++ G      G +++KD A G+                     + I 
Sbjct: 517 KFADNDLMGFPYQVVLGKRGLKNGTVELKDRATGERED------------------VAID 558

Query: 480 ELVSTVKKILQENKE 494
           E+V+ V ++++  + 
Sbjct: 559 EVVAKVAELVKAARR 573


>gi|150015183|ref|YP_001307437.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149901648|gb|ABR32481.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 643

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/276 (9%), Positives = 73/276 (26%), Gaps = 16/276 (5%)

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D       + ++    +G  +          +  +       +   + EK +++     K
Sbjct: 384 DGHLVVTPEQLEEEF-KGVLELIQYLMGTLGIAEKITYRFSKWDPNNTEKYINDPDAWNK 442

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                    + L +    V      +          R +      ++   + F +     
Sbjct: 443 TQDTMRNILDHLNI--NYVEADDEAAFYGPKLDLQFRNVHGKEDTLFTVQIDFALAERFD 500

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
              V          D    + +   +  +        L + ++    +         V  
Sbjct: 501 MSYV----------DKDGEKKRPYIIHRSSIGCYERTLAMLIEEYAGAFPTWLSP--VQA 548

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +          +  T+ L+  GIR E    + K  G +++ A     P  ++ G  E 
Sbjct: 549 KVLPISDKYNDYAEAVTKALKNKGIRVETDYRAEK-IGYKIREARLERTPYILVVGEKEA 607

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           +   + ++      E + ++          +    +
Sbjct: 608 ANNEVSVRSRKNDDEGAVKLDAFIERIVKEIENKEL 643



 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   + +  E  G+   +TPL+  SD   K     D    G+F L
Sbjct: 260 GLPLLMPKGAKIVQLLQRWVEDEEEKRGYLLTKTPLMAKSDLY-KISGHWDHYKDGMFVL 318

Query: 74  QD--DDGQWISLRYDLTAPL 91
            D   D +  +LR  +T P 
Sbjct: 319 GDEEKDDEVFALRP-MTCPF 337


>gi|332992302|gb|AEF02357.1| prolyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 554

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 49/142 (34%), Gaps = 6/142 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ N++ + +R      G   +  P+++ +D L +     +  
Sbjct: 31  MIRKLASGLYTWLPTGLRVLNKVANIVREEMNKAGGVEVLMPVVQPAD-LWEESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   +   L     ++   L R    ++  +      Y+I   FR+E     
Sbjct: 90  GPELLRIKDRHQRDFVLGPTHEEVITSLVRNEISSYKQLP--INLYQIQTKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADA 145
              +  +  + +  S       
Sbjct: 148 GIMRGREFTMKDAYSFHLDDTC 169



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/103 (10%), Positives = 32/103 (31%), Gaps = 3/103 (2%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                +      + +  M+           +   + L   GI   +F    +  G     
Sbjct: 449 GIMWPDPIAPFKIALIPMNMHKSHRIKEAAEALYEQLIALGIDV-LFDDRKERPGVMFND 507

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            +    P +I+ G        ++ K+   G++   ++ + + +
Sbjct: 508 MELIGIPHSIVIGERNLDNQQIEYKNRRTGEKQLLDLDSAKDF 550


>gi|332141950|ref|YP_004427688.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327551972|gb|AEA98690.1| prolyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 572

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ N++ + +R      G   +  P+++ +D L +     +  
Sbjct: 31  MIRKLASGLYTWLPSGLRVLNKVANIVREEMNKAGAIEVLMPVVQPAD-LWEESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   L     ++   L R    ++  +       +             
Sbjct: 90  GPELLRVKDRHQRDFVLGPTHEEVITALVRNEISSYKQLPLNLYQVQTKFRDEVRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F            S  E    +M          +G
Sbjct: 150 MRGREFTMKDAYSFHLEDSCLEETYQKMYGAYCAIFSRMG 189



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 32/104 (30%), Gaps = 2/104 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
              + I      LI    H S  + +      + L   GI         +  G      +
Sbjct: 469 KWPDPIAPFKIALIPMNMHKSHRIKEAVEALYEELVALGIEVLFDDRKER-PGVMFNDME 527

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               P +I+ G        ++ K+   G++   ++   + +  A
Sbjct: 528 LIGIPHSIVIGERNLDNQQVEYKNRRTGEKQLLDLSAAKEFVAA 571


>gi|224373093|ref|YP_002607465.1| prolyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|254782910|sp|B9LA07|SYP_NAUPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|223588823|gb|ACM92559.1| prolyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 574

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/526 (11%), Positives = 133/526 (25%), Gaps = 83/526 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D       + + I D I+   +  G   +    +  ++ L +      +  K +  +
Sbjct: 38  GIYDFAPLGKMVLDNIRDIIKKEMDASGAQEVMLTFVTPNE-LWEETGRAKKYGKELLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH----GPGRFR 126
           +D   Q   L     +    L R   +++  +        +                 F 
Sbjct: 97  KDRKDQSFVLAPTNEESVVDLVRGTIKSYKQLPVNLYQINLKFRDEARPRFGLLRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG-------------------------IK 161
                         +     M     +    +G                           
Sbjct: 157 MKDAYSFHATEEDLDREFNLMEETYKNIFTKLGLDFRAVWADSGAIGGSGSKEFMVLADT 216

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
             D  +  +       I      H   +   +  V+  +   D   ++ V   +G     
Sbjct: 217 GEDDIVVCSECDYAANIEVATRKHEKRENPVKTEVIEEVHTPDMKSIEDVCNFIGVDPYF 276

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV-------- 273
           +     K A     + +I+V F+         +    V      +    EL         
Sbjct: 277 SIKAVVKKAIYDDGKSEIVVFFVRGTDTLEETKATNAVGALELVDASEEELEAVGLVPGF 336

Query: 274 ------------------VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
                              ++E +       +     + ++         VY  I     
Sbjct: 337 IGPFGLPSSVRYIIDDDLRMAEELVCGANKKDYHIKGAGLLDANLLGNLTVYRDIAAVKE 396

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----------------GFSIGISRLI 359
            ++  K      +  G     +       + P                   + IG+SRLI
Sbjct: 397 GDKCPKCGAPLKITKGIEVGHIFKLGTVYSEPMNATFLDENGKAKPFIMGCYGIGVSRLI 456

Query: 360 VALKSLESSTNNIKEMGPVLITTMD------HDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
            A          I     +    +D         + L   +     L +AG++  +   +
Sbjct: 457 SAAIEQNHDDKGIIWPKQIAPFVVDIIVGDVKKDEQLIFAEDLYDKLTSAGVKTILDDRA 516

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            + FG ++   +    P+ +I G      G ++++D   G++   E
Sbjct: 517 ER-FGPKIADFELVGFPVCVIVGKK-LKDGKVEVRDRRTGEKFEVE 560


>gi|209545456|ref|YP_002277685.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533133|gb|ACI53070.1| prolyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 438

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 53/462 (11%), Positives = 104/462 (22%), Gaps = 74/462 (16%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+   I   +R   +  G   +  P ++ ++ L K     D     
Sbjct: 34  QTAAGIYAWLPAGWRVLQNIARIVREEQDAIGAQELLMPTVQSAE-LWKRSGRYDAYGPE 92

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  +QD   + +                                             + I
Sbjct: 93  MLRIQDRHEREL--------------------------------------LYGPTNEEMI 114

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                 V  S       +  +     + V  +           K             D  
Sbjct: 115 TDLFGQVVKSYRELPQVLYHIQWKFRDEVRPRFGVMRGREFLMKDAYSFDLDYASAVDSY 174

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS---------EQIDIM 240
               L  LR   +L    +  +    G    + S +F   A             E+ D +
Sbjct: 175 RRMMLAYLRTFQRLGVRAI-PMVADTGPIGGELSHEFLILAPTGESGVFFDGAFEEQDWL 233

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              + ID  +S+   +  +    A     ++       V        R      I     
Sbjct: 234 SDPVDIDDRESLDAFFTRMTSFYAATDEKHD-EAAWADVPAERRREGRGIEVGHIFHFGR 292

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
            YT  +   + G        +   +G   G  R    +      +               
Sbjct: 293 KYTESMDITVSGPDGAPLYPEMGSYG--IGVSRLVAAIIEASHDDNGIIWPDSVAPFRAA 350

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L     + +   +     +     +S               AG++              
Sbjct: 351 ILNL--KTGDAACDAICEQVYAAAPESFLYDDRGE------RAGVK-------------- 388

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              AD    P  +I G      G +++K  A G      + +
Sbjct: 389 FADADLMGHPWQVIVGPRGAKEGKVELKRRADGARFELSVDD 430


>gi|146293614|ref|YP_001184038.1| prolyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166980158|sp|A4Y8F6|SYP_SHEPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145565304|gb|ABP76239.1| prolyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 571

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       D+ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWDKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHNRDFVLGP 108



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 33/126 (26%), Gaps = 21/126 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AGI   +     +  G  
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIEVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  ++ G      G+ + K+   G++                    IP  +
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEK------------------QDIPFDQ 560

Query: 481 LVSTVK 486
           LV  +K
Sbjct: 561 LVDFLK 566


>gi|329118470|ref|ZP_08247175.1| proline--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465411|gb|EGF11691.1| proline--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 571

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 39/110 (35%), Gaps = 5/110 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++   +R   E  G   +  P+++ ++ L +  
Sbjct: 26  MIRAGLIKANA-SGLYTWMPMGLRVLRKVERVVREEMERAGSVELLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
              +   K +  L+D   +   +     ++   + R    ++  +     
Sbjct: 84  GRWEFYGKELLRLKDRHERDFCMGPTCEEVITDIVRKEITSYKQLPKNFY 133


>gi|65319684|ref|ZP_00392643.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 485

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G +EL   +E   ++   S   K  
Sbjct: 242 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDELWEQAEASLENVLQSLNYKYR 301

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 302 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 361

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 362 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 420

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+
Sbjct: 421 DMRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSGVIE 469



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/258 (10%), Positives = 66/258 (25%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 111 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 168

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 169 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 221

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      +  +    +  + 
Sbjct: 222 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------EYEVELSTRPEDS 275

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 276 MGDDELWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 335

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E        EK    
Sbjct: 336 QMPEKFDLNYIDEKNEKR 353


>gi|127513524|ref|YP_001094721.1| prolyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166980157|sp|A3QG64|SYP_SHELP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126638819|gb|ABO24462.1| prolyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 569

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R    N G   I  P+++ +D L       D+ 
Sbjct: 31  MIRRNASGLYSWLPSGLRVLRKVEAIVREEMNNAGAVEILMPMVQPAD-LWVETGRWDKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   QD   +   L  
Sbjct: 90  GPELLRFQDRHNRDFVLGP 108



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 21/127 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K   +     L  AGI   +F    +  G  
Sbjct: 460 DDRGIIWPAAIAPFKVGILPMNMHKSHRIKDMAEKLYSDLSDAGIEV-LFDDRKERPGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  I+ G      G+ + K+   G++                    IP  E
Sbjct: 519 FADMELIGLPHVIVIGERNIDNGVFEYKNRRTGEK------------------QEIPFEE 560

Query: 481 LVSTVKK 487
           +V  +K 
Sbjct: 561 IVDFIKS 567


>gi|311113703|ref|YP_003984925.1| threonine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945197|gb|ADP41491.1| threonine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 678

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/402 (10%), Positives = 101/402 (25%), Gaps = 35/402 (8%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
              +    R   I   F+                      +     A +       L+A+
Sbjct: 297 KREMEDYVRARHIAEGFQYVSTPHISKEDLFYTSGHLPYYADGMFPAMVLDNGNYRLKAM 356

Query: 159 GIKRNDYHIGINNRKILDG---ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
               ++       R   +      E   ++ D+K      + R            V    
Sbjct: 357 NCPMHNEIYRSRGRSYRELPLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHSYVTKEQ 416

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVI 275
                 +  +F           D  +   + D E    +  + +      E+    L  +
Sbjct: 417 APDEVRHLLNFMLSLLEDFGMTDFYLELSTRDTEG--DKKDKFIGTDEQWEQATAVLEQV 474

Query: 276 SEL--VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
           ++   +               I    +   G  ++        N+  +  +         
Sbjct: 475 AQETGLELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTVQYDFNQPSRFGL--------E 526

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y       +   +  +     I R +  L    +       + PV +  +          
Sbjct: 527 YQAADGSIQEPVMIHSAKFGSIERFLGVLTEHYAGAFP-AWLSPVQVICVPVAEAFNDYM 585

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 LR  G+R E+  GS + F  +++ A     P  +I G  +   G +  +     
Sbjct: 586 TEIADKLREQGVRVEVDYGSDR-FTKKIRTASTEKVPFILIAGGEDAEAGAVSFR----- 639

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
                              +  +P+ E V+ + + ++    E
Sbjct: 640 -------------FRGNKQENGVPVDEAVARIVEHIRNRVNE 668


>gi|256824985|ref|YP_003148945.1| prolyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688378|gb|ACV06180.1| prolyl-tRNA synthetase, family II [Kytococcus sedentarius DSM
           20547]
          Length = 596

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 1/91 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             +            V +     D+  L K +  T  L   G+   +      + G + K
Sbjct: 486 DEIGLVWPRELSPADVHVVATGKDAAVLEKAEELTAALEQQGLTVLLDDRPKVSPGVKFK 545

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
            A+    P  ++ G G  + G ++IKD A G
Sbjct: 546 DAELIGVPTILVVGKG-LAEGEVEIKDRAAG 575



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  ++   +R   E  G   I  P L   E  ++  ++    D     +
Sbjct: 40  GIYTWLPLGLKVMEKVKGIVREEMEAIGDQEIAFPSLLPREPYEASNRWTEYGD----DL 95

Query: 71  FSLQDDDGQWISLRY 85
           F L D  G  + L  
Sbjct: 96  FRLTDRKGADMLLGP 110


>gi|121535635|ref|ZP_01667441.1| threonyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305805|gb|EAX46741.1| threonyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 513

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + +  R ++  YG+  I+TP++     L +     D   + ++  
Sbjct: 138 GFPFFHPKGMVIRNELENFWRKLHVKYGYQEIKTPII-LHQRLWQQSGHWDHYRENMY-F 195

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 196 TTIDGEGYAVKPMNCPG 212



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 79/258 (30%), Gaps = 9/258 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   + +  E   ++  F  +     +    EL         G +E+  ++    
Sbjct: 258 DDAHIFMLPSQIKDEIQGVIDLFNEVYSTFGLTYHAELSTKPEKAM-GSDEIWEVATNAL 316

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           +       +        G  Y     +   L   +    Q   +   +    ++D     
Sbjct: 317 REALEERGMPYKINEGDGAFYGPKIDFH--LRDSIGRTWQCGTIQLDMLMPEKFDLTYVG 374

Query: 341 FKGQNVPATGF----SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
             GQ              + R I  L    +       + PV +  +      ++  Q  
Sbjct: 375 EDGQKHRPVMIHRVAYGSLERFIGILIEHYAGAFP-TWLAPVQVKILPITDRHVAYAQEV 433

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
             ++R+  IR E+    ++  G +++       P  +I G  E     + ++   +G   
Sbjct: 434 ATLMRSKDIRVEVD-SRNEKIGYKIREGQLEKVPYMLIVGDKETETRTVAVRKRGQGDIG 492

Query: 457 SREIKNNESWREARVAQI 474
           ++ + +  +   A +   
Sbjct: 493 AQAVDDFVAAILAEIQGK 510


>gi|290580052|ref|YP_003484444.1| putative threonyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996951|dbj|BAH87552.1| putative threonyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 649

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/396 (10%), Positives = 103/396 (26%), Gaps = 21/396 (5%)

Query: 85  YDLTAPLARYVAENF---DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
            D      R + E +     +    +     P+   + +         + D+       +
Sbjct: 268 PDG--ATIRRIIERYITDKEVASGYQHVYTPPIASVDLYKTSGHWDHYREDMFPTMDMGD 325

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
                +  M       V       +  +  R    G++ +    G     +R+  +   D
Sbjct: 326 GESFVLRPMNCPHHIEVYKNHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLND 385

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L  V+    +       D  +  NLT      +      D  K   +     K 
Sbjct: 386 GHTFVALDQVEDEF-KRTLQLIIDVYEDFNLTDYSF-RLSYRDPNDTHKYFDDDEMWEKS 443

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
               +   +++ +                            T    +     P   E   
Sbjct: 444 QTMLKAAMDDMGLDYYEAEGEAAFYGPKLDIQVKTALGNDETLSTIQLDFLLPERFELTY 503

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
               G               +   +     S         +++ + +         V + 
Sbjct: 504 IGADGE------------EHRPVMIHRGIVSTMERFTAYLIETYKGAFPTWLAPHQVTVI 551

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            + +++  +       + LR  GIRA++    ++    +++ +  +  P  +I G  E  
Sbjct: 552 PISNEA-HIDYAWEVAKELRDHGIRADVD-DRNEKMQYKIRQSQTKKVPYQLIVGDKEVE 609

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            G + ++     +  +  I        A + + + P
Sbjct: 610 SGTVNVRRYGSKQTHTESIAEFRENILADIKRKSRP 645



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 46/186 (24%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G+  + TP +   D   K     D   + +F  
Sbjct: 262 GLPFWLPDGATIRRIIERYITDKEVASGYQHVYTPPIASVDLY-KTSGHWDHYREDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+   LR             +  +    P R   +G + R EK          R 
Sbjct: 321 MDMGDGESFVLRPMNCPHHIEVYKNHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          E        ++ D  E   +    + +   +        +   + 
Sbjct: 381 MTLNDGHTFVALDQVEDEFKRTLQLIIDVYEDFNLTDYSFRLSYRDPNDTHKYFDDDEMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 EKSQTM 446


>gi|221133881|ref|ZP_03560186.1| prolyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 570

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 50/160 (31%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     +R+ N++ + +R      G   I+ P+++ +D L +     +  
Sbjct: 31  MVRKVASGLYNYLPTGLRVLNKVANIVREEMNKAGAIEIQMPVVQPAD-LWEESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVFRNEK 119
              +  ++D   +   L     ++   L R       +    +      +R     R   
Sbjct: 90  GPELLRIKDRHQRDFVLGPTHEEVVTALVRNEVSSYKQLPLNLYQIQTKFRDEVRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F               +T   +M     +  E +G
Sbjct: 150 MRGREFLMKDAYSFHLSQDCLQTTYDKMFQAYCNVFERIG 189



 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 6/124 (4%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY---TQMLRTAGIR 406
            + IG+SR++ A          IK    +   T+     ++ K        + L    + 
Sbjct: 444 CYGIGVSRIMAAAIEQNHDKYGIKWPDAIAPFTIAIIPMNMHKSHRIKEVAEKLYEECLA 503

Query: 407 --AEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              E+     K   G      +    P +I+ G        ++ K+   G++    I + 
Sbjct: 504 LGVEVLFDDRKERPGVMFNDMELIGVPHSIVIGERNLDNQEVEYKNRRTGEKKMLNIADL 563

Query: 464 ESWR 467
             + 
Sbjct: 564 SEFI 567


>gi|114563918|ref|YP_751432.1| prolyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299171|sp|Q07ZH1|SYP_SHEFN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114335211|gb|ABI72593.1| prolyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 571

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 34/109 (31%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  PL++ +D L       D+ 
Sbjct: 31  MIRRNASGLYTWLPSGLRVLRKVEAIVREEMNKTGAIEILMPLVQPAD-LWVETGRWDKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +   QD + +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFQDRNNRDFVLGPTHEEVITDLVRKELSSYKQLPLTLYQVQTK 138



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 3/109 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                +         V I  M+           +   Q L  AG+   M     +  G  
Sbjct: 460 DDRGITWPEAIAPFTVGILPMNMHKSHRVADIAEKLYQDLADAGVEVLMDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               +    P  ++ G      G+ + K+   G++         ++   
Sbjct: 519 FADMELIGLPHVVVIGDRNIDAGVFEYKNRRTGEKQDIPFDEIVAFLTN 567


>gi|329768866|ref|ZP_08260294.1| threonyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328837229|gb|EGF86866.1| threonyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 647

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 39/121 (32%), Gaps = 2/121 (1%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             +   L+  +           V I  +++D       +   Q L+ AG++  +     +
Sbjct: 525 RMVAFLLEEYKGDLPTWLAPNQVRIIPVNNDY-HYDYSKEIMQELKKAGVKVTID-DRDE 582

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +++ A  +  P  ++ G  E     + ++      +        +      + +  
Sbjct: 583 KLGYKIREAANKKIPYTLVIGDKEVENKAVNVRTFGSHDQKEESFVEFKENILKEINERL 642

Query: 476 I 476
           I
Sbjct: 643 I 643


>gi|320084496|emb|CBY94289.1| Prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 572

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFILGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 566


>gi|254284280|ref|ZP_04959248.1| prolyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680483|gb|EED36832.1| prolyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 564

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 47/155 (30%), Gaps = 4/155 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   +  G        +R+  R+   +R    N G   I  P+++ ++ L +     ++ 
Sbjct: 35  MIRRIAAGIYTWMPLGLRVLRRVEAVVREEMNNAGALEITMPVVQPAE-LWQESGRWEQY 93

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L+D   +   L     ++ + LAR   +++  +       +             
Sbjct: 94  GPELARLRDRHDREFCLGPTHEEVVSALARSEIKSYKQLPLNLYQIQTKFRDEVRPRFGV 153

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
              +             + +  E    M D    +
Sbjct: 154 MRSREFIMKDAYSFHVDQASQEETYWRMHDAYSRI 188


>gi|157964462|ref|YP_001499286.1| prolyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844238|gb|ABV84739.1| Prolyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 437

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/460 (9%), Positives = 124/460 (26%), Gaps = 67/460 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I + +R      G   I  P ++ +    +     D  
Sbjct: 40  MIRQQAAGIYTWLPLGLKVLKNIENIVRLNMNKAGALEILMPCIQPAHLWMES-GRFDNY 98

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +   QD        R+D T                                    F 
Sbjct: 99  GKEMLKFQD--------RHDNT----------------------------------LLFS 116

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              +  + ++      +  ++   +         +       +  R+ L        ++ 
Sbjct: 117 PTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINE 176

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++ +     + +A        +   + L        + +   G NL+ E   I+    + 
Sbjct: 177 ENAVKTYNQMYKAY-------INAFRDLGVFAIPVIADNGPIGGNLSHE-FHIIAE--TG 226

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +      + ++ +K     +    E+        +    +        I        G +
Sbjct: 227 ESTIYYDKKFKTLKDNPDID--VEEIKSWYAAAEEKHEVNKLPISEQEITSSKGIEVGHI 284

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +            +  V   ++       G ++  +  +       +  + +        
Sbjct: 285 FYI--------GSKYSVNMNALINDEH--GKLTPIEMSSYGIGISRLVAAIIEANCDEKG 334

Query: 367 SSTNNIKEMGPVLITTMDH-DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               +      V +  ++  DS  +   +M  + L    I        ++  G++    D
Sbjct: 335 IIWPSSVAPFKVSLINLNIHDSKCVELAEMAYKELSDKNIEVLYDDTEAR-PGSKFATHD 393

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
               P  II G  + +  ++++KD   G     E+ ++  
Sbjct: 394 LIGSPHQIIIGPKKAANNIVELKDRKSGVIEDIEVGSSNE 433


>gi|15892451|ref|NP_360165.1| prolyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|229586653|ref|YP_002845154.1| prolyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|81854111|sp|Q92I92|SYP_RICCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511616|sp|C3PNA1|SYP_RICAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15619605|gb|AAL03066.1| prolyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|228021703|gb|ACP53411.1| Prolyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 426

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/459 (10%), Positives = 126/459 (27%), Gaps = 65/459 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I + +R      G   +  P ++ +    +     D  
Sbjct: 31  MIRQQAAGIYTWLPLGLKVLKNIENIVRLNMNKAGALEVLMPCIQPAHLWMES-GRFDNY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +   QD        R+D T                                    F 
Sbjct: 90  GKEMLKFQD--------RHDNT----------------------------------LLFG 107

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              +  + ++      +  ++   +         +       +  R+ L        ++ 
Sbjct: 108 PTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINE 167

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++ +     + +A        +   + L        + +   G NL+ E   I+    + 
Sbjct: 168 ENAVKTYNQMYKAY-------INAFRDLGVFVIPVIADNGPIGGNLSHE-FHIIAE--TG 217

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +      + ++ +K     +    E+               + +++   +   E  +   
Sbjct: 218 ESTIYYDKKFKTLKDNPDID--VEEIKSWYAAAE------EKYEVNKLPISEQEITSSKG 269

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            E    F + ++    V   ++     Y  L               +         +   
Sbjct: 270 IEVGHIFYIGSK--YSVNMNALINDE-YGKLTPIEMSSYGIGISRLVAAIIEANCDEKGI 326

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +++      LI    HDS  +   +M  + L    I        ++  G++    D 
Sbjct: 327 IWPSSVAPFKVSLINLNIHDSKCVELAEMAYKELSDKNIEVLYDDTEAR-PGSKFATHDL 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P  II G  + +  ++++KD   G     E+ +  S
Sbjct: 386 IGSPHQIIIGPKKAANNIVELKDRKSGVIEDIEVGSLMS 424


>gi|20808138|ref|NP_623309.1| threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|22654110|sp|Q8R9A4|SYT_THETN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|20516726|gb|AAM24913.1| Threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 644

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +   G+  I TP++   + L K     D   + ++  
Sbjct: 270 GFPFFHPKGMIIRNILEDFWRKEHIKRGYQEIRTPIILNEE-LWKRSGHWDHYKENMY-F 327

Query: 74  QDDDGQWISLRYDLTAPLA 92
            + DGQ  +++        
Sbjct: 328 TEIDGQTYAIKPMNCPGAM 346



 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +   + L+   IR E+    ++  G +++ A  +  P  +
Sbjct: 543 WLAPVQVRVLPISEKHHEYARKVYERLQEHDIRVELD-DRNEKIGYKIREAQLQKIPYML 601

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E   G + ++    G      + N        +A
Sbjct: 602 IVGDREVEEGNVSLRSRKDGDLGPISLDNFIEKILKEIA 640


>gi|116492462|ref|YP_804197.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Pediococcus
           pentosaceus ATCC 25745]
 gi|122266074|sp|Q03GB7|SYT_PEDPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116102612|gb|ABJ67755.1| Ser-tRNA(Thr) hydrolase [Pediococcus pentosaceus ATCC 25745]
          Length = 648

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/436 (9%), Positives = 101/436 (23%), Gaps = 80/436 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +    +G+  + TP+L   D+                  
Sbjct: 263 GLPYWMPNGATIRRSIERYIIDKEVKHGYQHVYTPVLMNLDAYKTSG------------- 309

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                                    +++ +            ++
Sbjct: 310 ----------------------------------------HWQHYREDMFPPMDMGDGEM 329

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +      +  ++      +   + I+  +  +   +R    G L  +      ++   
Sbjct: 330 LELRPMNCPSHIQVYKHHIRSYRELPIRIAELGMM--HRYEKSGALSGLQRV--REMTLN 385

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                      +   + V  L+ E   D +          ++    +      + EK   
Sbjct: 386 DGHTFVAPDQIQAEFKKVLQLMVEVYRDFN---------ITDYTFRLSYRDPANTEKYFD 436

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +     K     +   ++L    + V   G  +            L+  T          
Sbjct: 437 DDEMWNKSQSMLKAAMDDL--GLDYVEAEGEAA-------FYGPKLDVQTKTALGNEETL 487

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +           +     Y G         +   G    + R    L  +        
Sbjct: 488 STIQLDFMLPKQFDL----HYVGADGEEHRPVMIHRGLVSTMERFTAYLIEMYKGAFPTW 543

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                +      D    +      + +    IR E+    ++  G +++ A  +  P  +
Sbjct: 544 LAPKQVTIIPVKDDLHGAYADKLREEMVDKDIRVEVDH-RNEKMGYKIREAQTQKIPYIL 602

Query: 434 IQGTGERSRGMLQIKD 449
           + G  E     + ++ 
Sbjct: 603 VVGDNELENNSVSVRH 618


>gi|325571530|ref|ZP_08147030.1| ATP phosphoribosyltransferase [Enterococcus casseliflavus ATCC
           12755]
 gi|325156006|gb|EGC68202.1| ATP phosphoribosyltransferase [Enterococcus casseliflavus ATCC
           12755]
          Length = 537

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 108/290 (37%), Gaps = 36/290 (12%)

Query: 27  NRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYD 86
            ++   +R +Y  + F P  +   E   +  +   D+      + +    DG+ ++L+ D
Sbjct: 30  EQVELKLRKLYTQHHFSPYHSNNFEEYRNYQQN--DQFLRGSSIITFTGTDGRTMALKPD 87

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
           +T  +A       +T     R          +    G +++  Q  ++ +         E
Sbjct: 88  VTLSIA------KNTPSGEARRVYYVEDVYRQDRQAGEYQKIDQIGLELIDQITWEDQLE 141

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  +  ++L  VG       + +++  ILDGI ++       K                 
Sbjct: 142 VVKLAWESLAQVG----KGTLDLSHMGILDGICQRFPEADRQK----------------- 180

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIA 264
               V   L +  +      T+ A L++ + + +     LS D E    +  EL+     
Sbjct: 181 ----VLHCLRDKSSHGMDALTEKAGLSATEAEKLAKLVRLSGDFETKYQKAKELLAEYPQ 236

Query: 265 GEKGFNELVVISELVRKSG-YNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
            + G  EL  + + ++K     S RI++  +I+   +YY+G +++  +  
Sbjct: 237 AQAGLAELNQLYQALQKEQLSASIRIRLDFSILNDADYYSGLLFQGFIEE 286


>gi|301053905|ref|YP_003792116.1| threonyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300376074|gb|ADK04978.1| threonyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 639

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G +EL   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDELWEQAEASLENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLTQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+
Sbjct: 575 DMRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSGVIE 623



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/258 (10%), Positives = 66/258 (25%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEVFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      +  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------EYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDELWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E        EK    
Sbjct: 490 QMPEKFDLNYIDEKNEKR 507


>gi|33152900|ref|NP_874253.1| prolyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|81836009|sp|Q7VKI5|SYP_HAEDU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33149125|gb|AAP96642.1| prolyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 571

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 45/166 (27%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     ++I  ++ + IR      G   I  P+++ ++   +  
Sbjct: 26  MLRAGMIRP-TAAGLYNWLPTGVKILKKVENIIREEMNKGGAIEILMPVVQPAELWQESS 84

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              ++    +    D   +   L     ++   L R       +    +      +R   
Sbjct: 85  -RWEQYGPELLRFADRGKRDFVLGPTHEEVITDLVRRELSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  +       +G
Sbjct: 144 RPRFGVMRSREFVMKDAYSFHTTPESLQQTYEVMYQVYHRIFTRLG 189



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 29/103 (28%), Gaps = 3/103 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDS--LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               +      V I  M+    +   +  +     L   G+   +     +  G      
Sbjct: 464 IWPTDEIAPFTVAIVPMNMFKSASVQAFAEQLYTDLMAQGVDVILDDRKER-PGVMFADM 522

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           +    P  I+ G      G ++ K+   G++         ++ 
Sbjct: 523 ELIGVPHMIVIGEKNLENGEVEYKNRRTGEKTMIAKDQLLAYL 565


>gi|323484406|ref|ZP_08089772.1| hypothetical protein HMPREF9474_01523 [Clostridium symbiosum
           WAL-14163]
 gi|323402184|gb|EGA94516.1| hypothetical protein HMPREF9474_01523 [Clostridium symbiosum
           WAL-14163]
          Length = 645

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 1/111 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +   + L  AGIRAE+    S+  G +++ A  +  P  +
Sbjct: 535 WLAPVQVKVLPISDKYADYAKTVLEELEEAGIRAELD-TRSEKIGYKIREAQTQKIPYML 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E   G + ++    G E S          +  +A   I  +E    
Sbjct: 594 VVGQKEEEEGNVSVRSRFAGDEGSDSTAGFIEKIKKEIAGKEIWQTEAKEE 644



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +L+  R I++  G+  I TP++  +  L +     D     +++ 
Sbjct: 262 GFPFFLPKGMELKNTLLEYWRQIHKKAGYVEISTPVI-LNRKLWETSGHWDHYKDNMYTT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
              D +  +++           A 
Sbjct: 321 VI-DEEDYAIKPMNCPGGVLAYAS 343


>gi|299822779|ref|ZP_07054665.1| threonine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816308|gb|EFI83546.1| threonine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 640

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/374 (10%), Positives = 108/374 (28%), Gaps = 18/374 (4%)

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
            R V E +         Y         K    +         +++    +  + E+ +  
Sbjct: 272 IRRVIERYIVDREERLGYSHVYTPIMAKVDFYKQSGHWDHYHEDMFPPMKMDNEELVLRP 331

Query: 152 ADTLEAVGIKRNDYHIG--INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQ 209
            +    + + +ND H    +  R    G++ +  + G     +R+  +   D        
Sbjct: 332 MNCPHHMMVYKNDIHSYRELPIRIAELGLMHRYEMSGALSGLQRVRGMTLNDAHVFVRPD 391

Query: 210 GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGF 269
            +K    +   +      K  ++T +    +      + EK   +     K     +   
Sbjct: 392 QIKDEF-KRVLELILAVYKDFDIT-DYKFRLSYRDPENTEKYFDDDAMWEKAQTMLKDAM 449

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
           +E+    +     G  +         V+        +    L F +        +     
Sbjct: 450 DEME--MDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGED-- 505

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
                     + +   +     S     +   ++  + +         + I  ++ D+  
Sbjct: 506 --------GEKHRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPIQMQIIPVNRDA-H 556

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
               +     L  AG+R E+    ++  G +++ A  +  P A++ G  E   G + I+ 
Sbjct: 557 FDYAKEVEDKLVRAGLRVEID-DRNEKLGYKIREAQTQKIPYALVVGDQESENGTVNIRR 615

Query: 450 LAKGKELSREIKNN 463
                  +  + + 
Sbjct: 616 YGSKDSETLSVDDF 629



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G+  + TP++   D   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDREERLGYSHVYTPIMAKVD-FYKQSGHWDHYHEDMFPP 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              D + + LR             +         +YR  P+   E     R+  
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGLMHRYEM 366


>gi|295696884|ref|YP_003590122.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295412486|gb|ADG06978.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 641

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + IRN +   +R     Y ++ ++TP+L     L +     D   + ++  
Sbjct: 267 GMPFLLPKGMVIRNELERFMREFLNEYDYEEVKTPILMDR-VLWERSGHWDHYKENMY-F 324

Query: 74  QDDDGQWISLRYDLTAPLA 92
            + D +  +L+       A
Sbjct: 325 TEVDEREFALKPMNCPGHA 343



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 42/134 (31%), Gaps = 10/134 (7%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             R +   +             + ++    +           + T+      L   +   
Sbjct: 506 NERHRPVMIHRAVLGSFERFFGLLIEHYNGAFPVWLAPVQARVLTIGAG--HLPYAKEVQ 563

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK-----DL-- 450
              R  G+R E+  G ++  G +++ A  +  P  ++ G  E   G + ++     DL  
Sbjct: 564 SRARAMGLRVEVD-GRAEKIGYKVREAQVQKIPYMLVIGDQEAQTGEVSVRKRGQGDLGR 622

Query: 451 AKGKELSREIKNNE 464
              +E+   I    
Sbjct: 623 RSAEEVLVAIAEEA 636


>gi|81301415|ref|YP_401623.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|123769177|sp|Q31JY3|SYT_SYNE7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81170296|gb|ABB58636.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Synechococcus
           elongatus PCC 7942]
          Length = 604

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 1/96 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +      L   Q     LR  G+R ++     +  G  ++ A++   P+  + G  
Sbjct: 506 QIRLLPVTETVLDYCQQVADQLRAIGVRVQVDCSGDR-LGKLIRNAEKAKIPVMAVIGAQ 564

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           E     L I+  A G   S  + +      + +A+ 
Sbjct: 565 EAESETLSIRTRATGDLGSLTVADLTKRLSSAIAEK 600



 Score = 40.2 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ + D ++      G+  + TP L   D   K         + +F +
Sbjct: 217 GLPLWTPKGTILRSTLEDFLKQEQMKRGYQSVVTPHLARVDLF-KVSGHWQNYREDMFPM 275

Query: 74  QDDDGQWISL 83
             +D +   L
Sbjct: 276 MAEDDEARGL 285


>gi|218710332|ref|YP_002417953.1| prolyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782926|sp|B7VIT2|SYP_VIBSL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218323351|emb|CAV19528.1| prolyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 571

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 47/169 (27%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G   I  P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    N  +              +       
Sbjct: 90  GPELLRFTDRHSRPFVLSPTAEEVVTSLVR----NEISSYKQLPLNLYQIQTKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E        +     K  D        
Sbjct: 146 RFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEYRP 194



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L   GI   +F    +  G   K  +    P  I+ G    
Sbjct: 481 MNMHKSERVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFKDIELVGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G + +  +       +A++A
Sbjct: 540 DEGNFEYKNRRTGDKEAIAMDTVIEHLKAQLA 571


>gi|86748969|ref|YP_485465.1| ATP phosphoribosyltransferase regulatory subunit [Rhodopseudomonas
           palustris HaA2]
 gi|86571997|gb|ABD06554.1| ATP phosphoribosyltransferase regulatory subunit [Rhodopseudomonas
           palustris HaA2]
          Length = 385

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 66/370 (17%), Positives = 124/370 (33%), Gaps = 55/370 (14%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           +++   +   G+   E  +L+ +D       ++ R  K ++   D  G+ + LR DLT P
Sbjct: 17  EALLQSFGQAGYVRAEPAILQPADPFLDLSGEDIR--KSLYLTTDSSGEELCLRPDLTIP 74

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
           +AR           P     +GPVFR     P  F Q           +A  A+     +
Sbjct: 75  VARDYLA-SAIAGEPAGFCYLGPVFRQRGGKPSEFLQAGIESFGRQDRAAADAEMLALGL 133

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL-- 208
            A +   +G   +     +     L   L    +     + +          +++  L  
Sbjct: 134 EATSAFGLGE-VDIRTGDVALFSALIDALGLYPVWRRRLMKDFNRQASLAQDIERLTLAT 192

Query: 209 ------QGVKLLLGEGRTDNSGDFTKGA------------------------------NL 232
                 +GV   L       +                                      L
Sbjct: 193 SSANEYEGVLAALAGSDRKAALALVTDLMSIAGATTLGGRAVSEIADRFLEQSTLKSGAL 252

Query: 233 TSEQIDIMVSFLSIDL--EKSMHELYELVKGT-IAGEKGFNELVVISELVRKSGYNSNRI 289
             + +  +  FL+I    + ++ +L  L     +A +   ++       +   G +  + 
Sbjct: 253 PRDALQKIKRFLAISGAPQDALTQLRALAADAQLAIDAAIDQFESRIGFMAARGIDLTKT 312

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPA 348
           + S++  RG++YYTG  +E        +          +  GGRYDGL+S+      +PA
Sbjct: 313 RFSTSFGRGVDYYTGFEFELHRAGNGDD---------PLVAGGRYDGLMSQLGASAPIPA 363

Query: 349 TGFSIGISRL 358
            GFSI I  +
Sbjct: 364 VGFSIWIEAM 373


>gi|120598308|ref|YP_962882.1| prolyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|152016601|sp|A1RI33|SYP_SHESW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120558401|gb|ABM24328.1| prolyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 571

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       D+ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWDKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHNRDFVLGP 108



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 33/126 (26%), Gaps = 21/126 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AGI   +     +  G  
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIEVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  ++ G      G+ + K+   G++                    IP  +
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEK------------------QDIPFDQ 560

Query: 481 LVSTVK 486
           LV  +K
Sbjct: 561 LVDFLK 566


>gi|300724773|ref|YP_003714098.1| proline tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297631315|emb|CBJ92010.1| proline tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 573

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++ + +R    N G   +  P+++ +D   +     ++ 
Sbjct: 31  MIRKLASGLYNWMPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWLES-GRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +    D   +   L     ++   L R    ++  +          +R     R   
Sbjct: 90  GPELLRFVDRGERPFVLGPTHEEVITDLVRNEVTSYKQLPLNLFQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +    +M    +     +G
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDKMYAAYSKIFTRIG 189



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 35/113 (30%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  ++      V I  M+       K   +     LR +GI         +  G  
Sbjct: 461 DDRGIIWSDAIAPFQVAILPMNMHKSYRVKEVAEKLYADLRASGIDVIFDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  ++ G      G ++ K    G +   ++++   + + ++ Q
Sbjct: 520 FADMELIGVPHTLVIGDRNLDNGEIEYKCRRTGDKQMLKLESIIEYLKGQIQQ 572


>gi|154490252|ref|ZP_02030513.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC
           43184]
 gi|154089144|gb|EDN88188.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC
           43184]
          Length = 651

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/462 (10%), Positives = 109/462 (23%), Gaps = 82/462 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  ++R ++ D ++ I + YG+  + TP +                       
Sbjct: 262 GLPLWLPRGTQLRLKLEDFLKRIQKKYGYQQVMTPHI----------------------- 298

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
               G+ +                              G   +  K          + + 
Sbjct: 299 ---GGKQL--------------------------YVTSGHYAKYGKDSFQPIHTPQEGEE 329

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +         E+      + + +             R    G + +    G+     R
Sbjct: 330 FLLKPMNCPHHCEIFKSFPRSYKDL-----------PLRFAEFGTVYRYEQSGELHGLTR 378

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      D         +K    +        F        E    +   ++ D      
Sbjct: 379 VRGFTQDDAHLFCRPDQLKDEFLKVMDIIFIIFKALDFENFEAQISLRDKVNRDKYIGSE 438

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAILG 312
           E +E  +  I        L    E    + Y       +   I R  +  T    +    
Sbjct: 439 ENWEKAESAIIEACQEKGLKAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDYN 495

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
            P   E +              D    R    +    G       + V ++         
Sbjct: 496 LPERFELEYTGE----------DNKKHRPVMIHRAPFGSM--ERFVAVLIEHTGGKFPLW 543

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V I  +              + L    +   +    ++  G +++  + +  P  
Sbjct: 544 LTPDQVAILPIS--EKFNDYAYEVKRQLEAEDLSVLVD-DRNEKIGRKIRDTELKRIPYM 600

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +I G  E     + ++   +G + S +I    +  +  V   
Sbjct: 601 LIVGEKEAENNEVSVRKQGEGDKGSMKITTFAALLKGEVEDQ 642


>gi|126737394|ref|ZP_01753129.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           SK209-2-6]
 gi|126721979|gb|EBA18682.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           SK209-2-6]
          Length = 362

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 103/364 (28%), Gaps = 48/364 (13%)

Query: 32  SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL 91
            IR  +E  G   ++ P L+ + +L     ++ R    V S      Q   LR D T P+
Sbjct: 13  RIRMNFEAAGAQVVDPPYLQPAGTLLDLYGEDIRARAYVTSDAVRGEQM--LRPDFTVPV 70

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
              V  +      P R    G VFR ++  P R  +++Q   +    S            
Sbjct: 71  ---VEMHMRHGAEPARYTYAGEVFRRQEQDPERASEYLQVGYEVFDRSDSAGADAEVF-- 125

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL-------- 203
              L A+ ++         +  IL   ++ +      K      + R             
Sbjct: 126 --ALFALQLRGLPLRAATGDIGILMAAVQGLETTEVRKAALMRHIWRPRRFRALLDRFAG 183

Query: 204 DKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK--- 260
                +  + LL    T        G     E I   V  L  D +      +EL+    
Sbjct: 184 RTPPPESRRKLLETEGTLTGSAVEVGKRRAHE-IQARVDLLREDAKAPPIAEHELLALEA 242

Query: 261 --------------------GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                                        + L   +  ++  G + + +   ++  R   
Sbjct: 243 LMMVRETLPFATEQLRDIAVDLPQINPALDRLDARAAALKARGIDIDNLDFEASYGR--- 299

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
                  E   GF      +       +  GGRYD L  +            +    L++
Sbjct: 300 ----TSMEYYDGFVFGFYAEARPDLPPIASGGRYDALTRQLGQGAEIPAVGGVLRPDLML 355

Query: 361 ALKS 364
            L+ 
Sbjct: 356 ELEE 359


>gi|329767326|ref|ZP_08258851.1| threonyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836015|gb|EGF85706.1| threonyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 647

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 39/121 (32%), Gaps = 2/121 (1%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             +   L+  +           V I  +++D       +   Q L+ AG++  +     +
Sbjct: 525 RMVAFLLEEYKGDLPTWLSPNQVRIIPVNNDY-HYDYSKEIMQELKKAGVKVAID-DRDE 582

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +++ A  +  P  ++ G  E     + ++      +        +      + +  
Sbjct: 583 KLGYKIREAASKKIPYTLVIGDKEVENRNVNVRTFGSHDQKEESFAEFKENILKEINERL 642

Query: 476 I 476
           I
Sbjct: 643 I 643


>gi|188533062|ref|YP_001906859.1| prolyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|226701287|sp|B2VDZ9|SYP_ERWT9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188028104|emb|CAO95961.1| Prolyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 572

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L D   +   L  
Sbjct: 90  GPELLRLVDRSDRPFVLGP 108



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 32/113 (28%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  +       V I  M+       K   +   Q LR  GI   +     +  G  
Sbjct: 461 DERGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYQQLRAKGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  I+ G        ++ K    G++   +      +  A +AQ
Sbjct: 520 FADMELIGVPHTIVIGERNLDNDEIEYKARRGGEKRLIKTDEIVDFLMAELAQ 572


>gi|56751513|ref|YP_172214.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|73919835|sp|Q5N1X6|SYT_SYNP6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56686472|dbj|BAD79694.1| threonyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 607

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 1/96 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +      L   Q     LR  G+R ++     +  G  ++ A++   P+  + G  
Sbjct: 509 QIRLLPVTETVLDYCQQVADQLRAIGVRVQVDCSGDR-LGKLIRNAEKAKIPVMAVIGAQ 567

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           E     L I+  A G   S  + +      + +A+ 
Sbjct: 568 EAESETLSIRTRATGDLGSLTVADLTKRLSSAIAEK 603



 Score = 40.2 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ + D ++      G+  + TP L   D   K         + +F +
Sbjct: 220 GLPLWTPKGTILRSTLEDFLKQEQMKRGYQSVVTPHLARVDLF-KVSGHWQNYREDMFPM 278

Query: 74  QDDDGQWISL 83
             +D +   L
Sbjct: 279 MAEDDEARGL 288


>gi|138894777|ref|YP_001125230.1| prolyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166980126|sp|A4IMD1|SYP_GEOTN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134266290|gb|ABO66485.1| Prolyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 567

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 41/157 (26%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++   IR      G   +  P L+ ++ L +           
Sbjct: 34  QSASGVYTFLPLGQRVLQKVEAIIREEMNRAGALELLMPALQPAE-LWQQSGRWYSYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  L+D   +   L     ++   + R   + +  +          +R     R      
Sbjct: 93  LMRLKDRHERDFVLGPTHEEMITTIVRDEVKTYKRLPLILYQIQTKFRDEKRPRFGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F             S +    +M    A+     G
Sbjct: 153 REFIMKDAYSFHTSQESLDETYNKMYEAYANIFRRCG 189



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 20/123 (16%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              ++      L+T      +     + + + L  AG    ++    +  G +   +D  
Sbjct: 464 WPVSVAPFHVHLLTANAKSDEQRMLAEEWYEKLGQAGFDV-LYDDRPERAGVKFADSDLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             PL +  G    S G++++K    G+                     +P+ EL+ TV++
Sbjct: 523 GIPLRVTVGKR-ASEGVVEVKVRKTGE------------------TFDVPVGELIETVRR 563

Query: 488 ILQ 490
           +LQ
Sbjct: 564 LLQ 566


>gi|303557|dbj|BAA03654.1| DrpA protein [Escherichia coli W3110]
          Length = 155

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108


>gi|317125011|ref|YP_004099123.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Intrasporangium
           calvum DSM 43043]
 gi|315589099|gb|ADU48396.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Intrasporangium
           calvum DSM 43043]
          Length = 664

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 41/121 (33%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    +           LR  G+R E+     + F  +++ A +   P  +
Sbjct: 562 WLSPVQVLGVPVADEYADYLGGVLDRLRRKGVRVELDASDDR-FPKKIRNASKAKVPFVL 620

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +R+   +  +    G + +                  +PI + ++ V   +    
Sbjct: 621 IAGEDDRAADAVSFR-FRDGSQKNG-----------------VPIDDAIAEVLAAIASRA 662

Query: 494 E 494
           +
Sbjct: 663 Q 663


>gi|47565742|ref|ZP_00236782.1| threonyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47557378|gb|EAL15706.1| threonyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 639

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 78/264 (29%), Gaps = 23/264 (8%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  ++  +    +    +    +        G ++L   +E    +  +S   K  
Sbjct: 396 IEDEIKSVMKQIDYVYKIFGFQYEVELSTRPEDSMGDDKLWEQAESALANVLHSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEIADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+        
Sbjct: 575 DVRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVIE-------- 623

Query: 470 RVAQITIPISELVSTVKKILQENK 493
                   ++  V ++K+ ++  K
Sbjct: 624 --------LNGFVESIKEEIKNKK 639



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDHKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|237756770|ref|ZP_04585264.1| prolyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691073|gb|EEP60187.1| prolyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 162

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R+  +I + IR   ++ G   +  P+L  ++ L K         K +F L
Sbjct: 38  GIYEYLPLGLRVLRKIENIIRKHMDDSGALEVLLPILTPAE-LWKETGRWYVYGKELFRL 96

Query: 74  QDDDGQWISLRY 85
           +D      +L  
Sbjct: 97  KDRKDAEFALGP 108


>gi|238897616|ref|YP_002923295.1| proline tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511602|sp|C4K3K4|SYP_HAMD5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|229465373|gb|ACQ67147.1| proline tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 579

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 33/103 (32%), Gaps = 4/103 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  +I + +R      G   +  P+++ +D L +     +  
Sbjct: 31  MIRKLASGLYTWLPTGTRVLKKIENIVREEMNKAGAIEVVMPIVQPAD-LWQESERWEHY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPC 106
              +    D   +   L     ++   L R    ++  +    
Sbjct: 90  GPELLRFADRSERPFVLGPTHEEVITDLVRNEISSYKQLPLNF 132


>gi|114046916|ref|YP_737466.1| prolyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944801|sp|Q0HWU6|SYP_SHESR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113888358|gb|ABI42409.1| prolyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 570

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       D+ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWDKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHNRDFVLGP 108



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AGI   +     +  G  
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIDVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      G+ + K+   G++          + +   A
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPFDQIVDFLKNLQA 570


>gi|325067070|ref|ZP_08125743.1| prolyl-tRNA synthetase [Actinomyces oris K20]
          Length = 605

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 4/109 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN--Q 420
                +         V +     D       +     L   G   E+     +      +
Sbjct: 493 DDKGLTWPVQIAPYHVQVLATGKDQAVFDVAEQIASSLDADG--VEVLYDDRRKVSAGVK 550

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              A+    P  ++ G      G ++I+D   G+  S       +   +
Sbjct: 551 FADAELLGLPYTLVVGRDLAKEGTVEIRDRRTGERRSVSADAAAAELSS 599



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   +I D +R   +  G   +  P L  ++         D     +F L
Sbjct: 40  GVYTWLPLGLRTLRKIEDIVRQEMDAMGGQEVHFPALLPAEPYQA-TGRWDDYGPTLFKL 98

Query: 74  QDDDGQWISLRY 85
           +D       L  
Sbjct: 99  RDRKDGDYLLAP 110


>gi|229549033|ref|ZP_04437758.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|312904390|ref|ZP_07763551.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|229305826|gb|EEN71822.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|310632289|gb|EFQ15572.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315162804|gb|EFU06821.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315576849|gb|EFU89040.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 660

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 120/463 (25%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +     G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEIRLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|113969687|ref|YP_733480.1| prolyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130574|sp|Q0HKJ4|SYP_SHESM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113884371|gb|ABI38423.1| prolyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 570

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       D+ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWDKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHNRDFVLGP 108



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AGI   +     +  G  
Sbjct: 460 DDRGIVWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLSAAGIDVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      G+ + K+   G++          + +   A
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDVPFDQIVDFLKNLQA 570


>gi|310764925|gb|ADP09875.1| prolyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 572

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L D   +   L  
Sbjct: 90  GPELLRLVDRSDRPFVLGP 108



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 31/113 (27%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  +       V I  M+       K   +     LR  GI   +     +  G  
Sbjct: 461 DERGIIWSPALAPFQVAILPMNMQKSFRVKELAEELYHQLRAKGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  ++ G        ++ K    G++   +      +  A +AQ
Sbjct: 520 FADMELIGVPHTVVIGERNLDSEEIEYKSRRAGEKRMMKTNEIVDFLVAELAQ 572


>gi|259907567|ref|YP_002647923.1| prolyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963189|emb|CAX54673.1| Prolyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283477409|emb|CAY73325.1| proS [Erwinia pyrifoliae DSM 12163]
          Length = 572

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L D   +   L  
Sbjct: 90  GPELLRLVDRSDRPFVLGP 108



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 31/113 (27%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  +       V I  M+       K   +     LR  GI   +     +  G  
Sbjct: 461 DERGIIWSPALAPFQVAILPMNMQKSFRVKELAEELYHQLRAKGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  ++ G        ++ K    G++   +      +  A +AQ
Sbjct: 520 FADMELIGIPHTVVIGERNLDSEEVEYKSRRAGEKRMMKTNEIVDFLVAELAQ 572


>gi|168183457|ref|ZP_02618121.1| threonine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796594|ref|YP_002864146.1| threonyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259516348|sp|C3KTK0|SYT_CLOB6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|182673322|gb|EDT85283.1| threonine--tRNA ligase [Clostridium botulinum Bf]
 gi|229263282|gb|ACQ54315.1| threonine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 635

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/368 (12%), Positives = 98/368 (26%), Gaps = 14/368 (3%)

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
              +R E    G         ++                M  T    G            
Sbjct: 277 ENFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDGDYAIKPMNCPGG 336

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
             +    +         +L+E  IV R        GL  V+        D++  +     
Sbjct: 337 ILVYKNSMHSY-RDLPLRLSELGIVHRHELSGALHGLMRVR----CFTQDDAHLYMTKEQ 391

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           +  E + I+                EL            +  + +  +R+     + I  
Sbjct: 392 IKEEIVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLRE---ALDSIGK 448

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT-- 349
              +  G   + G   +  L   +    Q   +        R+D       G+       
Sbjct: 449 EYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMV 508

Query: 350 --GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                  + R I  L    +       + PV +  M+         +   + L+   IR 
Sbjct: 509 HRTIYGSVERFIGILIEQYAGAFP-TWLAPVQVKLMNITDAQYDYLKKVEEALKENNIRV 567

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E+    ++  G +++ A  +  P  +I G  E   G + ++    G   +  ++      
Sbjct: 568 EID-TRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKI 626

Query: 468 EARVAQIT 475
           +  +   T
Sbjct: 627 KNEIKVKT 634



 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + +  R  +   G+  I TPL+  +++L       D   + ++  
Sbjct: 261 GFPFFHPKGMIIRNILENFWREEHTKAGYQEIRTPLI-LNEALWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 319 TNIDDGDYAIKPMNCPG 335


>gi|294010776|ref|YP_003544236.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674106|dbj|BAI95624.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 668

 Score = 62.9 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/450 (11%), Positives = 120/450 (26%), Gaps = 69/450 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R   ++ G+  ++TP +  +    +      +  + +F +
Sbjct: 274 GSVFWHPKGYIIWRALEAYMRRAIDDAGYREVKTPQVMDARQ-WEQSGHWGKYRENMFVI 332

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D+                                    P   +E         ++    
Sbjct: 333 PDE-----------------------------------VPNVEDEGPLVSDDADWMA--- 354

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +      A   +      +   + ++   Y  G  +R    G L  +      +  + 
Sbjct: 355 --LKPMNCPAHVLIFRQGIKSYRDLPLRF--YENGCCHRNEPHGALHGLMRV--RQFTQD 408

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +      ++    L      D    ++    L  E+     S    D  ++  
Sbjct: 409 DAHIFCREDQIVEEVRAFCALADRIYKDFGFTYSIKLALRPEK--RFGSDAMWDQAENEL 466

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                  G    E G+ EL                  ++  I R  +  T      +   
Sbjct: 467 RDAVAAAGLDTPEYGWEELPGEG----AFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPER 522

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
              +   +                  R +   +    F      + + ++          
Sbjct: 523 LDASYVGEDG---------------ERHRPVMLHRAIFGSYERFIGILIEHYAGRFPLWL 567

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                ++ T+  D+D         + LR AGIRAE  L  ++    +++       P  +
Sbjct: 568 APVQAVVATIVSDAD--GYAIEVAEKLRAAGIRAETDL-RNEKINYKVREHSLAKVPNLL 624

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           + G  E   G + +++L K  +    + + 
Sbjct: 625 VVGRREADEGTVALRELGKEGQSVLSVDDV 654


>gi|27382635|ref|NP_774164.1| ATP phosphoribosyltransferase regulatory subunit [Bradyrhizobium
           japonicum USDA 110]
 gi|27355807|dbj|BAC52789.1| hisZ [Bradyrhizobium japonicum USDA 110]
          Length = 383

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 3/95 (3%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           D++   +   G+   E  +L+ ++       ++ R  K ++   D  G+ + LR DLT P
Sbjct: 17  DTLLLSFAQAGYVRAEPAILQPAEPFLDLSGEDIR--KSLYLTTDLTGEELCLRPDLTIP 74

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           +AR    +      P     +GPVFR        F
Sbjct: 75  VARDYLASSRA-GQPAGFSYLGPVFRYRSGQASEF 108


>gi|15606769|ref|NP_214149.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|8928367|sp|O67583|SYT_AQUAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2984004|gb|AAC07549.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 638

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 46/138 (33%), Gaps = 3/138 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +             + L+              V+I  +          +   
Sbjct: 504 NKKHRPYMIHRALLGSIERFTGILLEHYAGLLPIWLSPTQVMIIPIA--DRHHEYAKKVY 561

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L+  GIRAEM L   +    +++ A+ +  P+ ++ G  E     + ++   +G   S
Sbjct: 562 EFLKENGIRAEMDLREER-MNAKIRDAELKKIPVILVVGDREAQNNTVSVRTKKEGNLGS 620

Query: 458 REIKNNESWREARVAQIT 475
            E+     W + ++    
Sbjct: 621 MELNKFLDWIKEKIKNKE 638


>gi|257420184|ref|ZP_05597178.1| threonyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257162012|gb|EEU91972.1| threonyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 645

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 261 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 319

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 320 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 360

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 361 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 416

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 417 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 466

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 467 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 526

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 527 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 571

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 572 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 600

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 601 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 640


>gi|222152709|ref|YP_002561885.1| threonyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254783540|sp|B9DU13|SYT_STRU0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222113521|emb|CAR41303.1| threonyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 648

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/381 (10%), Positives = 103/381 (27%), Gaps = 16/381 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +      +  Q D+       +  +  +  M       V 
Sbjct: 284 KELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVY 343

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 344 KNHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRAL 403

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                D  +  NLT  +    +S+      +  ++  E+ +   +  K   +  +  E  
Sbjct: 404 QL-IIDVYEDFNLTDYRF--RLSYRDPKDTEKYYDNDEMWENAQSMLKAALD-EMGVEYF 459

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 460 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 508

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 509 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKA 568

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  GIRA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 569 LRDRGIRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTES 627

Query: 460 IKNNESWREARVAQITIPISE 480
           +        A +A+ + P+ +
Sbjct: 628 LSEFMDTILADIARKSRPVED 648



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 80/326 (24%), Gaps = 31/326 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N  H        I   
Sbjct: 321 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVHSYRELPIRIAEL 360

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    +      I    ++ L  I   I ++ D  L +
Sbjct: 361 GMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLI---IDVYEDFNLTD 417

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--- 249
               L   D  D          + E              +   + +   +F    L+   
Sbjct: 418 YRFRLSYRDPKDTEKYYDN-DEMWENAQSMLKAALDEMGVEYFEAEGEAAFYGPKLDIQV 476

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K+     E +                 + +   G     + I   ++  +E +T  + E 
Sbjct: 477 KTALGNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAILIET 534

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYD 335
             G          V    +      D
Sbjct: 535 YKGAFPTWLAPHQVTVIPISNEAHID 560


>gi|73666953|ref|YP_302969.1| prolyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|114152194|sp|Q3YSD4|SYP_EHRCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72394094|gb|AAZ68371.1| Prolyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 424

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/455 (10%), Positives = 116/455 (25%), Gaps = 69/455 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  ++  G        +R+   I + +R      G   +  PL++ + SL K     D  
Sbjct: 31  LIKQIASGIYTWLPLGLRVLRNIENIVREEMNKSGALEVLMPLIQPA-SLWKESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +  + D + + +                                             
Sbjct: 90  GSEMLRITDRNQREMLFGP--------------------------------------THE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + I   +    +S +     +  +     + +  +           K      + +    
Sbjct: 112 EVITDTLRTTLTSHKNLPITLYQIQWKFRDELRPRYGIMRCREFLMKDAYSFDKDLSGAI 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                     ++    L    +  VK   G    + S +F   AN               
Sbjct: 172 LSYNLMFKTYIKIFKNLGLTPI-AVKAESGPIGGNLSHEFHVLAN--------------- 215

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             E +++   E+++   +       +                    +  +      T   
Sbjct: 216 SGESTLYYDQEIIELMNSDNIDIERIKNTYTAADDMHDP------QTCPIPPNNIKTSKG 269

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            E    F + ++  KP            D   S+         G S  ++ +I      +
Sbjct: 270 IEIGHIFYLGDKYSKP------MNANFCDNNDSKPLQMGCYGIGISRLVAAIIEVFHDNK 323

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             T   +           + S+   K     + L        ++  +  + G +L   D 
Sbjct: 324 GITWPEEISPFKFSLVNLYSSN--DKCIKVAENLHMQLHNDVLYDDTDDSPGIKLTRTDL 381

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  II G     + ++++++ +   +    ++
Sbjct: 382 LGMPWQIIIGKSTVEQDLIEVRNRSNKDKFLISVE 416


>gi|84394652|ref|ZP_00993343.1| prolyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84374725|gb|EAP91681.1| prolyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 551

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 47/169 (27%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G   I  P+++  + L +     ++ 
Sbjct: 11  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVEILMPVVQPFE-LWEETGRSEKM 69

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    N  +              +       
Sbjct: 70  GPELLRFTDRHSRPFVLSPTAEEVVTSLVR----NEISSYKQLPLNLYQIQTKFRDERRP 125

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E        +     K  D        
Sbjct: 126 RFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCKAFDRMGLEYRP 174



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L   GI   +F    +  G   K  +    P  I+ G    
Sbjct: 461 MNMHKSERVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFKDIELVGIPHTIVIGDRSM 519

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G +    +       +A++A
Sbjct: 520 DEGNFEYKNRRTGDKEVIAMDTVIEHLKAQLA 551


>gi|313901663|ref|ZP_07835096.1| tRNA synthetase class II (G H P and S) [Thermaerobacter
           subterraneus DSM 13965]
 gi|313468063|gb|EFR63544.1| tRNA synthetase class II (G H P and S) [Thermaerobacter
           subterraneus DSM 13965]
          Length = 470

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 27  NRILDSIRNIYENYGFDPIETPLLEYS-DSLGKFLPDEDRPNKGVFSLQDDDGQWISLRY 85
                 +   +  +G+  I TPL E + D L    P+            D  G+ ++LR 
Sbjct: 24  EETRRRLAGRFAAWGYRRIRTPLWEEARDELLAVFPETALC-----RFVDPAGRVLALRP 78

Query: 86  DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           D T  +AR+ A        P R Y + PVFR +      
Sbjct: 79  DHTLAVARWAASR-LDGADPWRLYYLDPVFRRDPRDGRF 116


>gi|292489201|ref|YP_003532088.1| prolyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898564|ref|YP_003537933.1| prolyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198412|emb|CBJ45519.1| prolyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291554635|emb|CBA22316.1| Prolyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 572

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L D   +   L  
Sbjct: 90  GPELLRLVDRSDRPFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 30/113 (26%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  +       V I  M+       K   +     LR  GI   +     +  G  
Sbjct: 461 DERGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYHQLRAKGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  I+ G        ++ K    G++   +      +    +AQ
Sbjct: 520 FADMELIGVPHTIVVGERHLDSEEVEYKSRRAGEKRMIKTNEIIDFLVEELAQ 572


>gi|253988145|ref|YP_003039501.1| prolyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253779595|emb|CAQ82756.1| prolyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 574

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     IR+  ++   +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYNWMPTGIRVLKKVEKIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFADRGDRPFVLGP 108



 Score = 41.4 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 23/88 (26%), Gaps = 3/88 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +      +      V I  M+       K   +     LR  GI         +  G  
Sbjct: 461 DNRGIIWPDAIAPFQVAILPMNMHKSYRVKEIAEKLYADLRACGIDVIFDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +    P  I+ G      G ++ K
Sbjct: 520 FADMELIGVPHTIVIGDRNLDSGEVEYK 547


>gi|153938058|ref|YP_001392415.1| threonyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|166223335|sp|A7GI05|SYT_CLOBL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|152933954|gb|ABS39452.1| threonine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320405|gb|ADG00783.1| threonine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 635

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 76/259 (29%), Gaps = 9/259 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  +     +  E I I+                EL            +  + +  +R
Sbjct: 381 DDAHLYMTKEQIKEEVIGIIKLIDEFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLR 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           +     + I     +  G   + G   +  L   +    Q   +        R+D     
Sbjct: 441 E---ALDSIGKEYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIG 497

Query: 341 FKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
             G+              + R I  L    +       + PV +  M+         +  
Sbjct: 498 ADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFP-TWLAPVQVKLMNITDSQYDYLKKV 556

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + L+   IR E+    ++  G +++ A  +  P  +I G  E   G + ++    G   
Sbjct: 557 EETLKENNIRVEID-TRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLG 615

Query: 457 SREIKNNESWREARVAQIT 475
           +  ++      +  +   T
Sbjct: 616 AISLEEFIEKIKNEIKNKT 634



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  +   G+  I TPL+  +++L       D   + ++  
Sbjct: 261 GFPFFHPKGMIVRNILESFWREKHTKAGYQEIRTPLI-LNEALWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 319 TNIDDGDYAIKPMNCPG 335


>gi|255974800|ref|ZP_05425386.1| threonyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256616698|ref|ZP_05473544.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|257081588|ref|ZP_05575949.1| threonyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257084237|ref|ZP_05578598.1| threonyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257417026|ref|ZP_05594020.1| threonyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|255967672|gb|EET98294.1| threonyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256596225|gb|EEU15401.1| threonyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256989618|gb|EEU76920.1| threonyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256992267|gb|EEU79569.1| threonyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257158854|gb|EEU88814.1| threonyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|295113730|emb|CBL32367.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Enterococcus sp.
           7L76]
          Length = 645

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 261 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 319

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 320 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 360

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 361 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 416

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 417 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 466

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 467 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 526

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 527 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 571

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 572 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 600

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 601 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 640


>gi|320120274|gb|EFE27922.2| proline--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 596

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 45/159 (28%), Gaps = 8/159 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G         R+  +I   IR   +      +    ++ S+ L K     +     
Sbjct: 57  KLVSGVYSYLPLGKRVLAKIERVIREEMDAANSQEVLMSAIQPSE-LWKESGRWENFGPE 115

Query: 70  VFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +F L D + +   L     ++   L R       +   ++      YR     R      
Sbjct: 116 MFRLYDRNEREFCLGPTHEEIFTSLVRDELKSYKQLPLSLYQIQTKYRDEKRPRFGVIRA 175

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
             F        D      + +  EM        + + +K
Sbjct: 176 REFIMKDAYTFDRDPDGMKQSYQEMWEAYTKIFDRLHMK 214


>gi|312173361|emb|CBX81615.1| Prolyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 572

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L D   +   L  
Sbjct: 90  GPELLRLVDRSDRPFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 30/113 (26%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  +       V I  M+       K   +     LR  GI   +     +  G  
Sbjct: 461 DERGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYHQLRAKGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  I+ G        ++ K    G++   +      +    +AQ
Sbjct: 520 FADMELIGVPHTIVVGERHLDSEEVEYKSRRAGEKRMIKTNEIIDFLVEELAQ 572


>gi|237729500|ref|ZP_04559981.1| prolyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226909229|gb|EEH95147.1| prolyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 590

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 49  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWEESGRWEQY 107

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 108 GPELLRIADRGDRSFVLGP 126



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 479 DDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGIEVLMDDRKER-PGVM 537

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 538 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKELIKTGDIVDFL 584


>gi|170750682|ref|YP_001756942.1| ATP phosphoribosyltransferase regulatory subunit [Methylobacterium
           radiotolerans JCM 2831]
 gi|170657204|gb|ACB26259.1| tRNA synthetase class II (G H P and S) [Methylobacterium
           radiotolerans JCM 2831]
          Length = 380

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 6/106 (5%)

Query: 30  LDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTA 89
              +       G+ P+  P+L+  +   +   ++ R  + +F  QD  G  + LR + T 
Sbjct: 16  RARLSAHLAAAGYRPVTPPVLQPLEPFLELSGEDIR--RRIFVTQDAGGAELCLRPEFTI 73

Query: 90  PLARYVAENFDTIVFPCRTYRIGPVFR--NEKHGPGRFRQFIQCDV 133
           P+ R      +           GPVFR   ++              
Sbjct: 74  PVCR--LHRAEADGQAADYSYCGPVFRLAADEPDEFFQAGIESIGR 117


>gi|30262390|ref|NP_844767.1| threonyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47527681|ref|YP_019030.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185231|ref|YP_028483.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165870612|ref|ZP_02215266.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167633022|ref|ZP_02391348.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167639601|ref|ZP_02397871.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170686938|ref|ZP_02878157.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170706731|ref|ZP_02897190.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177649587|ref|ZP_02932589.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190565155|ref|ZP_03018075.1| threonyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227814802|ref|YP_002814811.1| threonyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229603163|ref|YP_002866723.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254684964|ref|ZP_05148824.1| threonyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254722370|ref|ZP_05184158.1| threonyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254737411|ref|ZP_05195115.1| threonyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254743403|ref|ZP_05201088.1| threonyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254751726|ref|ZP_05203763.1| threonyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254760245|ref|ZP_05212269.1| threonyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|30257021|gb|AAP26253.1| threonine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47502829|gb|AAT31505.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49179158|gb|AAT54534.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164713767|gb|EDR19290.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512310|gb|EDR87686.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167531834|gb|EDR94499.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170128462|gb|EDS97330.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170668989|gb|EDT19733.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172084661|gb|EDT69719.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190563182|gb|EDV17147.1| threonyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227004862|gb|ACP14605.1| threonine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229267571|gb|ACQ49208.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 639

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G +EL   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDELWEQAEASLENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+
Sbjct: 575 DMRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSGVIE 623



 Score = 57.2 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/258 (10%), Positives = 66/258 (25%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      +  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------EYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDELWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E        EK    
Sbjct: 490 QMPEKFDLNYIDEKNEKR 507


>gi|329115958|ref|ZP_08244675.1| threonine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326906363|gb|EGE53277.1| threonine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 648

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/381 (11%), Positives = 104/381 (27%), Gaps = 16/381 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +      +  Q D+       +  +  +  M       V 
Sbjct: 284 KELASGYQHVYTPPMASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVY 343

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 344 KNHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRAL 403

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                D  +  NLT  +    +S+         ++  E+ +   A  K   +  +  +  
Sbjct: 404 QL-IIDVYEDFNLTDYRF--RLSYRDPKDTHKYYDNDEMWENAQAMLKAALD-EMGVDYF 459

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 460 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 508

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 509 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKT 568

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  GIRA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 569 LRDRGIRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKAVNVRRYGSKATHTES 627

Query: 460 IKNNESWREARVAQITIPISE 480
           I+       A +A+ + P+SE
Sbjct: 628 IEEFVDNILADIARKSRPVSE 648



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 80/326 (24%), Gaps = 31/326 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPMASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N  H        I   
Sbjct: 321 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVHSYRELPIRIAEL 360

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    +      I    ++ L  I   I ++ D  L +
Sbjct: 361 GMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLI---IDVYEDFNLTD 417

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--- 249
               L   D  D          + E              +   + +   +F    L+   
Sbjct: 418 YRFRLSYRDPKDTHKYYDN-DEMWENAQAMLKAALDEMGVDYFEAEGEAAFYGPKLDIQV 476

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K+     E +                 + +   G     + I   ++  +E +T  + E 
Sbjct: 477 KTALGNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAILIET 534

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYD 335
             G          V    +      D
Sbjct: 535 YKGAFPTWLAPHQVTVIPISNEAHID 560


>gi|320333471|ref|YP_004170182.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319754760|gb|ADV66517.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 649

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 51/149 (34%), Gaps = 18/149 (12%)

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +    F      + + ++              V I  +    +  +        
Sbjct: 514 DHRPIMIHRAPFGSLERFVGILIEHYGGDFPLWLAPRQVAIIPIADRHNEYAYALE--AE 571

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR AG+R E+   S++    +++ A+    P+ +I G  E+            G+++S  
Sbjct: 572 LRAAGLRTEVDDSSNR-MNAKVRAAELSKIPVMLIVGDKEQE-----------GRQVSVR 619

Query: 460 IKNNESWREARVAQITIPISELVSTVKKI 488
            +  E  +E +     +   +L + + + 
Sbjct: 620 ERTPEGHKERKG----VAFDDLKAELLER 644



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 2/111 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G          +R  +   +R      G+  + TP +   +   K        +   FS
Sbjct: 267 KGLPMWLPNGTILREELTRFLREQQFARGYQGVVTPNIGNLELY-KTSGHYQNYSDSNFS 325

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGP 122
               D +   L+        R  A    +    P R    G V+R E+ G 
Sbjct: 326 PITVDDEQYMLKPMNCPHHVRIYASKPRSYRDLPVRLAEFGTVYRYEQSGE 376


>gi|229845777|ref|ZP_04465889.1| prolyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810781|gb|EEP46498.1| prolyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 572

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLG 189



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGIPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRTGEKEMISKDKLLSVLNEK 568


>gi|256963904|ref|ZP_05568075.1| threonyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256954400|gb|EEU71032.1| threonyl-tRNA synthetase [Enterococcus faecalis HIP11704]
          Length = 645

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 261 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 319

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 320 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 360

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 361 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 416

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 417 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 466

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 467 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 526

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 527 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 571

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 572 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 600

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 601 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 640


>gi|256763421|ref|ZP_05504001.1| threonyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256958077|ref|ZP_05562248.1| threonyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257079964|ref|ZP_05574325.1| threonyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256684672|gb|EEU24367.1| threonyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256948573|gb|EEU65205.1| threonyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256987994|gb|EEU75296.1| threonyl-tRNA synthetase [Enterococcus faecalis JH1]
          Length = 645

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 261 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 319

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 320 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 360

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 361 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 416

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 417 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 466

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 467 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 526

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 527 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 571

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 572 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 600

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 601 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 640


>gi|92114261|ref|YP_574189.1| prolyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|114152183|sp|Q1QVL8|SYP_CHRSD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91797351|gb|ABE59490.1| prolyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 573

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 43/160 (26%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R   ++ + +R      G   +  P ++ ++ L +     D+ 
Sbjct: 31  MIRRLSSGLYTWLPLGLRTLRKVENIVREEMNRAGAQEVLMPSIQPAE-LWQESGRWDQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEK 119
              +  ++D   +         ++   L R    ++  +       +         R   
Sbjct: 90  GNLLLRIRDRHERDFCYGPTHEEVITDLVRNEIRSYKQLPSNFYQIQTKFRDETRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D   +  + +   M          +G
Sbjct: 150 MRAREFIMKDAYSFDIDQAGLQRSYDAMYDAYMRIFTRLG 189


>gi|78186013|ref|YP_374056.1| threonyl-tRNA synthetase, class IIA [Chlorobium luteolum DSM 273]
 gi|78165915|gb|ABB23013.1| Ser-tRNA(Thr) hydrolase [Chlorobium luteolum DSM 273]
          Length = 677

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    D           +  AGIR E+ L S K  G +++ ++    P  +
Sbjct: 577 WLAPVQAVVLPIAEDVHDYAAGVRNAMLAAGIRTELDLRSEK-IGKKIRESELSKIPYMV 635

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G  E  +G + ++   KG E +  I++        + + 
Sbjct: 636 VVGQKEEEKGAVSLRRHRKGDEGTLSIQDMIERLREEIDRK 676



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 75/269 (27%), Gaps = 12/269 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP----D 62
           L  E+  G      K   IR  +   +++     G+ P+ TP +   +   +        
Sbjct: 286 LSPEIGSGLPVWLPKGAIIRQELETFLKDEQRRRGYLPVYTPHIGNIELYKRSGHYPYYS 345

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           + +     +  +D   +   L+             +        R+YR  P+   E    
Sbjct: 346 DSQFPPLTYHDEDGKQEQYLLKPMNCP-------HHHLIYSSEMRSYRDLPIRLTEFGTV 398

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            R  Q  + +   V +   T D        D L        D    +      D +  ++
Sbjct: 399 YRHEQSGELN-GLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTQFVFRTLGFDAVETRL 457

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +H  +   +        ++ +K   +    +  +           G  +     D +  
Sbjct: 458 SMHDPENQTKYGGTPEVWEQAEKDVKEAADRMGIKYFIGIGEASFYGPKIDFIVRDALGR 517

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNE 271
              +   +  + + E    T  G  G   
Sbjct: 518 KWQLGTVQVDYVMPERFDLTYVGNDGQKH 546


>gi|218529752|ref|YP_002420568.1| ATP phosphoribosyltransferase regulatory subunit [Methylobacterium
           chloromethanicum CM4]
 gi|218522055|gb|ACK82640.1| tRNA synthetase class II (G H P and S) [Methylobacterium
           chloromethanicum CM4]
          Length = 387

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 124/390 (31%), Gaps = 69/390 (17%)

Query: 20  TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
                    +   +   +   G+ P   P+L+  +   +   ++ R  + +F  QD +G 
Sbjct: 9   PSGAEALRHV--RLSAHFSACGYVPASPPVLQPVEPFLELSGEDIR--RRIFVTQDANGA 64

Query: 80  WISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
            + LR + T P+ R    +  T          +GPVFR     P  F Q     +    +
Sbjct: 65  ELCLRPEFTIPVCRL---HQATRPGESADYSYLGPVFRLVAGEPDEFVQGGIESIGRTDT 121

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH--GDDKLNERLIV 196
            A  A+     +         + R+D  + + +  +    L+ + +      +    +  
Sbjct: 122 PAADAEVLGLALE----GLALLGRSDVTVRLGDMGLTHAFLDALHVPPVAKRRTLRAIAA 177

Query: 197 LRAIDKLDKFGLQG-----------------VKLLLGE---------------------G 218
            R++D++                        V+  + +                      
Sbjct: 178 GRSLDEVANSVQAEDRHAGLLAAIQGQDAGAVRAFVEDVLSIAGISQVGGRSAGAIAERF 237

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG------EKGFNEL 272
               S     GA L +   +++  + +I  +              AG      E      
Sbjct: 238 LAKASAQAHGGAGLNATNRELIERYCAISGDPDAAVAAVRALAREAGLTHEGLEAALALF 297

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +  +   G    R + +    R L+YYTG ++E             P    ++ GGG
Sbjct: 298 EERTGFMAARGLPVERFRFNGGFARNLDYYTGFIFEVT----------GPQGGPTLVGGG 347

Query: 333 RYDGLVSR-FKGQNVPATGFSIGISRLIVA 361
           RYDGL+ +      +PA G +  +SR   A
Sbjct: 348 RYDGLLQQLGSPVPLPAVGCAFWLSRCAQA 377


>gi|257421590|ref|ZP_05598580.1| threonyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257163414|gb|EEU93374.1| threonyl-tRNA synthetase [Enterococcus faecalis X98]
          Length = 645

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 261 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 319

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 320 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 360

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 361 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 416

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 417 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 466

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 467 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 526

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 527 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 571

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 572 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 600

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 601 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 640


>gi|224613500|gb|ACN60329.1| Threonyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 383

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 6/129 (4%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
              +G    ++A+ +          + P  +  +     S +  Q   +  R AG  A++
Sbjct: 253 RAVLGSLERMIAILAENFGGKWPLWLSPAQVIIIPVGGGSETYAQQVVRQFREAGFMADV 312

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE-----LSREIKNNE 464
                     +++ A         + G  E   G + ++    GK+         + +  
Sbjct: 313 DDDQGATLNKKIRSAQLAQYNYIFVVGEKECESGTVSVRT-RGGKQLGRRPTEEVLASLS 371

Query: 465 SWREARVAQ 473
             R+ R  Q
Sbjct: 372 HLRDTRSNQ 380



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 90/313 (28%), Gaps = 13/313 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N + D I+  Y   GF  + TP L YS +L +     +  ++ +F++  D 
Sbjct: 8   FLPKGAHIYNTLADFIKTEYRRRGFHEVVTPTL-YSTALWERSGHWEHYSENMFTVTGDT 66

Query: 78  GQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGP----GRFRQFIQCD 132
               +L+            +   +    P R    G + RNE  G      R R+F Q D
Sbjct: 67  -HTYALKPMNCPAHCLMFEQRVRSWRELPLRWADFGALHRNELSGALGGLTRVRRFCQDD 125

Query: 133 VDNVGSSAE-TADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL--DGILEKIGLHGDDK 189
                +  +   +   C+    ++  V        +       L    + +      +  
Sbjct: 126 AHIFCTPEQLEEEIMACLDFVRSVYRVFGFSFHCLLSTRPTPCLGEHALWDHAEQQLERS 185

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           L +     +       F    + + + +         T   +     I   + ++  D E
Sbjct: 186 LQQFGERWQLNPGDGAFYGPKIDIQIKDAIGRQHQCATIQLDFQL-PIRFDLQYVGGDGE 244

Query: 250 KS--MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
               +     ++           E       +  S      I +        +       
Sbjct: 245 THRPVMVHRAVLGSLERMIAILAENFGGKWPLWLSPAQVIIIPVGGGSETYAQQVVRQFR 304

Query: 308 EAILGFPVMNEKQ 320
           EA     V +++ 
Sbjct: 305 EAGFMADVDDDQG 317


>gi|225873756|ref|YP_002755215.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|259516262|sp|C1F9K5|SYT_ACIC5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225794268|gb|ACO34358.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 681

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 1/90 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  +      L+  +   Q L  AG R E+    ++    +++    +  P  +
Sbjct: 578 WLAPVQIGLVPISERHLAYAEKVQQQLEAAGFRVELD-RRNEKMNAKIRDFTLQKFPYVL 636

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           I G  E   G + ++   KG + S  +   
Sbjct: 637 IMGDKEAEAGAVSVRTRGKGDQGSLPLDEF 666



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 1/77 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  + D +R      G+D + TP +     L K    E   ++ +F+ 
Sbjct: 299 GLIFWHPKGAMIRKIMEDWMREECIRRGYDLVYTPHVMRVQ-LWKTSGHEGFYSQNMFTP 357

Query: 74  QDDDGQWISLRYDLTAP 90
            + D     L+      
Sbjct: 358 MELDDAEYRLKPMNCPG 374


>gi|91793895|ref|YP_563546.1| prolyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060765|sp|Q12L53|SYP_SHEDO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91715897|gb|ABE55823.1| prolyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 571

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 33/109 (30%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  PL++ +D L       ++ 
Sbjct: 31  MIRRNASGLYSWLPSGLRVLRKVEAIVREEMNKAGAIEILMPLVQPAD-LWIETGRWEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +   QD   +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFQDRHNRDFVLGPTHEEVITDLVRKEVSSYKQLPLSLYQIQTK 138



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 36/131 (27%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   Q L  AGI   +     +  G  
Sbjct: 460 DDRGIMLPEALAPFTVGILPMNMHKSHRVADIAEKLYQDLNDAGIEVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  ++ G      G+ + K+   G++                    IP+ +
Sbjct: 519 FADMELIGLPHVVVIGDRNIDAGVFEYKNRRTGEK------------------QDIPLDQ 560

Query: 481 LVSTVKKILQE 491
           +V  +K  L+ 
Sbjct: 561 IVDFLKSSLKA 571


>gi|29377326|ref|NP_816480.1| threonyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255971805|ref|ZP_05422391.1| threonyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256854147|ref|ZP_05559512.1| threonyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|73919789|sp|Q830D0|SYT_ENTFA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29344793|gb|AAO82550.1| threonyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255962823|gb|EET95299.1| threonyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256711090|gb|EEU26133.1| threonyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|323481721|gb|ADX81160.1| threonyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 645

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 261 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 319

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 320 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 360

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 361 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 416

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 417 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 466

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 467 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 526

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 527 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 571

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 572 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 600

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 601 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 640


>gi|257087763|ref|ZP_05582124.1| threonyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256995793|gb|EEU83095.1| threonyl-tRNA synthetase [Enterococcus faecalis D6]
          Length = 645

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 261 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 319

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 320 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 360

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 361 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 416

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 417 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 466

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 467 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 526

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 527 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 571

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 572 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 600

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 601 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 640


>gi|256960954|ref|ZP_05565125.1| threonyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256951450|gb|EEU68082.1| threonyl-tRNA synthetase [Enterococcus faecalis Merz96]
          Length = 645

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 261 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 319

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 320 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 360

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 361 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 416

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 417 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 466

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 467 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 526

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 527 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 571

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 572 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 600

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 601 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 640


>gi|167758905|ref|ZP_02431032.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704]
 gi|167663312|gb|EDS07442.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704]
          Length = 641

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 4/110 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L   +   + L  AGIRAE+    ++  G +++ A     P  +
Sbjct: 533 WLAPVQVKVLPISEKHLEYGKKVLEQLEEAGIRAELD-ERAEKIGYKIREAQMNKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA---QITIPISE 480
           + G  E  + ++ ++    G E  ++I +     +  +    Q  +   +
Sbjct: 592 VVGAKEEEQNLVSVRSRFAGDEGQKDIASFIDAIKEEIQAKVQREVTKED 641



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +LD  R +++  G+  + TP++  S  L +     D     +++ 
Sbjct: 260 GFPFFLPKGMVLKNTLLDYWRELHKENGYVEVSTPII-LSRHLWENSGHWDHYKDNMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 MI-DEEDYAVKPMNCPG 334


>gi|325295461|ref|YP_004281975.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065909|gb|ADY73916.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 658

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +      ++  +   + L+  GIRA++   S K  G +++ A+    P  +
Sbjct: 558 WLAPTQVVVIPVSDKYINYAENVFRKLKEVGIRAKLDDESGK-VGYKIRKAELLKIPYMV 616

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           I G  E+    + ++   +G   S EI N        + + 
Sbjct: 617 IVGEKEQESNTVSVRSKKEGDLGSMEISNFLDKILTEIKEK 657



 Score = 46.8 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            G          IR  I + +   +E  G+  I TP +  +D L K     D   + +F
Sbjct: 262 SGLVFWHPNGAIIRREIEEWVEKEHEKRGYQRIYTPHIMKAD-LWKISGHYDFYKENMF 319


>gi|270293200|ref|ZP_06199411.1| threonine--tRNA ligase [Streptococcus sp. M143]
 gi|270279179|gb|EFA25025.1| threonine--tRNA ligase [Streptococcus sp. M143]
          Length = 647

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/395 (12%), Positives = 100/395 (25%), Gaps = 40/395 (10%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    I    +     P+   E +         + D+       +  +  +  M  
Sbjct: 279 RYIVDK--EIAAGYQHVYTPPIASVELYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVR-- 616

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                           R  +    T+P+ E VS +
Sbjct: 617 ----------------RYGQKETNTVPVDEFVSAI 635



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|270284377|ref|ZP_05966008.2| proline--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270276752|gb|EFA22606.1| proline--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 602

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 2/111 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D  +    +     L   G+          + G + K
Sbjct: 491 DERGLAWPANIAPAQVHVVATGKDEAAFEAAEKLVAELEARGVEVIFDDRKKVSPGVKFK 550

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARVA 472
            A+    PL  + G    + G ++++ L  G  + +   +        RVA
Sbjct: 551 DAELIGVPLIAVAGRDTVNDGTIEVR-LRDGSDKQAVPAETAAQVIADRVA 600



 Score = 42.1 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                + + N+I   IR      G   +  P L             +   + +F L+D  
Sbjct: 46  WLPLGLSVLNKIEAIIREEMNGIGAQEVHFPALLPRAPYEA-THRWEEYGENLFRLKDRH 104

Query: 78  GQWISLRY 85
                L  
Sbjct: 105 EADYLLAP 112


>gi|85059898|ref|YP_455600.1| prolyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|114152253|sp|Q2NRN0|SYP_SODGM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|84780418|dbj|BAE75195.1| prolyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 574

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G   +  P+++ +D L +      + 
Sbjct: 31  MIRKLASGLYSWLPTGLRVLRKVENIVREEMDNAGAIEVSMPVVQPAD-LWQESGRWVQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFTDRGARAFVLGP 108



 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K   +   Q L+  GI   +     +  G  
Sbjct: 461 DDRGILWPETLAPFNVAILPMNMHKSFRVKEVAEDLYQQLQARGIDVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G        ++ K+   G++   ++     +  + +A
Sbjct: 520 FADMELIGVPHQLVIGDRNLDTEEIEYKNRRSGEKRMIKLSAIVDFLVSEIA 571


>gi|93355883|gb|ABF09972.1| prolyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 614

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 49/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++ + +R      G   +  P+++ ++ L +     D+ 
Sbjct: 72  MIKKLGAGIYNYMPVGLRVIRKVENIVREEMNRAGAVELSMPVIQPAE-LWQETGRWDKM 130

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  L+D   +  +++    ++   +AR    ++  +       +             
Sbjct: 131 GPELLRLKDRHERDFAVQPTSEEVVTDIARTEIRSYKQLPVNFYQIQTKFRDERRPRFGI 190

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D      + +   M        +  G
Sbjct: 191 MRGREFTMKDAYSFDRDIDGLKASYQNMYDAYVRIFQRFG 230



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/86 (10%), Positives = 23/86 (26%), Gaps = 3/86 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  + +D      ++       L  AG+   +     +  G  
Sbjct: 503 DERGIIWPAAIAPFAVVVCPVGYDRNEAVKAEADRIHAELLAAGVDVILD-DRGERPGVM 561

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQ 446
               +    P  ++ G      G ++
Sbjct: 562 FADWELIGVPHRVVVGDRGLKEGKVE 587


>gi|150401612|ref|YP_001325378.1| threonyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166223353|sp|A6UW94|SYT_META3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150014315|gb|ABR56766.1| threonyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 630

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/362 (11%), Positives = 98/362 (27%), Gaps = 20/362 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF--------IQCDVDNVGSSAETAD 144
           R+  +                V  N                               +  +
Sbjct: 230 RWYPKGKLIRDLLQDYVYNMVVENNGMPVETPVMYDLGNKAIKEHADKFGERQYRFKQGN 289

Query: 145 AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
            ++ +  A       +K++ Y +  +    L  +      +        L  LR     D
Sbjct: 290 KDLMLRFAACFGQFMMKKDMYILPKHLPLKLYELSTYSFRYEQRGELVGLKRLRGFTMPD 349

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA 264
              +        E   +      K  +  +     +  F     E++    +++ K    
Sbjct: 350 MHTVCKDTKQTIEEFENQFWMCLKTGDDLNTPYSTIFRFTEDFFEENKEWFFKVAKEYKE 409

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
            + G + ++ +    +        + +  +  R +E  T       +   V + K+  +V
Sbjct: 410 -KYGKDVILELIPERKHYWVGKVDMAVIDSFGRPIENPT-------VQIDVESAKRFNIV 461

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
               G    Y  ++      ++      +     + A     +       + P+    + 
Sbjct: 462 VHD-GNEKTYPVILHCSPTGSIERVLCGLLEKASLDA--DAGAPPMLPVWLSPIQARVIP 518

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
                        + LR  GIRA+      ++ G +++ A +   P  I+ G  E    +
Sbjct: 519 VADAHSEYALSVAKKLRENGIRADFD-DREESVGKKIRNAGKDWVPFVIVIGDKEVENNI 577

Query: 445 LQ 446
           L 
Sbjct: 578 LT 579


>gi|319775327|ref|YP_004137815.1| prolyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|319897767|ref|YP_004135964.1| prolyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|329122677|ref|ZP_08251255.1| proline--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317433273|emb|CBY81648.1| prolyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317449918|emb|CBY86130.1| prolyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327472551|gb|EGF17981.1| proline--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 572

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLG 189



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELVGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRTGEKEMISKDKLLSVLNEK 568


>gi|289167501|ref|YP_003445770.1| Threonyl-tRNA synthetase, threonine-tRNA ligase [Streptococcus
           mitis B6]
 gi|288907068|emb|CBJ21902.1| Threonyl-tRNA synthetase, threonine-tRNA ligase [Streptococcus
           mitis B6]
          Length = 647

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 43/142 (30%), Gaps = 5/142 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + +      A +A
Sbjct: 619 GQKETQTVSVDDFVQAILADIA 640



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPP 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|317047006|ref|YP_004114654.1| prolyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948623|gb|ADU68098.1| prolyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 572

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLRKVENIVREEMNNAGAIEISMPVVQPAD-LWEESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  ++D   +   L  
Sbjct: 90  GPELLRIKDRHERPFVLGP 108



 Score = 40.2 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 31/131 (23%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K         LR  GI   +     +  G  
Sbjct: 461 DERGIIWPAALAPFEVAILPMNMHKSFRVKEVADELYNALRAKGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  I+ G        ++ K                    +   +  I  SE
Sbjct: 520 FADMELIGVPHTIVIGDRNLDNAEIEYK------------------ARSASEKEMIKHSE 561

Query: 481 LVSTVKKILQE 491
           +V  + K L +
Sbjct: 562 IVDFLAKALNK 572


>gi|254427770|ref|ZP_05041477.1| prolyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196193939|gb|EDX88898.1| prolyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 572

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   IR   +  G   +  P+++  + L +        
Sbjct: 31  MVRKLASGLYTWLPSGLRVLRKVEQVIREEMDRAGAQEVLMPVVQPME-LWEESGRAPAY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D       L  
Sbjct: 90  GPELLRITDRHNNPFCLGP 108



 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 25/154 (16%)

Query: 346 VPATGFSIGISRLIVALKSLESSTN---NIKEMGPVLITTMDHDSDSLSKYQMYTQ---- 398
           +P   + IG++R++ A     +        + + P  +  +  +     + +   +    
Sbjct: 437 MPMGCYGIGVTRVVAAAIEQNNDDRGIIWPEAIAPFQVALIPVNIKKSPRERELAETLYA 496

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L  AGI         +  G +L  ++    P  I+        G+L+ K          
Sbjct: 497 ELTAAGIEVIFDDREKERLGVKLADSELIGIPHRIVIAERGMDNGVLEYK---------- 546

Query: 459 EIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                         +  +P+  +V+ +K  L  N
Sbjct: 547 --------GRGDADKTEVPVDVVVAFIKGKLGTN 572


>gi|168179213|ref|ZP_02613877.1| threonyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670074|gb|EDT82050.1| threonyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 635

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 76/259 (29%), Gaps = 9/259 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  +     +  E + I+                EL            +  + +  +R
Sbjct: 381 DDAHLYMTKEQIKEEVVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLR 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           +     + I     +  G   + G   +  L   +    Q   +        R+D     
Sbjct: 441 E---ALDSIGKEYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIG 497

Query: 341 FKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
             G+              + R I  L    +       + PV +  M+         +  
Sbjct: 498 ADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFP-TWLAPVQVKLMNITDSQYDYLKKV 556

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + L+   IR E+    ++  G +++ A  +  P  +I G  E   G + ++    G   
Sbjct: 557 EEALKENNIRVEID-TRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLG 615

Query: 457 SREIKNNESWREARVAQIT 475
           +  ++      +  +   T
Sbjct: 616 AISLEEFIEKIKNEIKNKT 634



 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  +   G+  I TPL+  +++L       D   + ++  
Sbjct: 261 GFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLI-LNEALWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 319 TNIDDDDYAIKPMNCPG 335


>gi|326795786|ref|YP_004313606.1| prolyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546550|gb|ADZ91770.1| Prolyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 577

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 51/169 (30%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++ +G        +R+  ++ + +R+  E  G   +  P ++ ++ L +      + 
Sbjct: 31  MIRQISKGLYTWLPTGLRVLKKVENIVRDEMEKAGALEVMMPGVQPAE-LWEESGRWQKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   +   L     ++   LAR    N  T              +       
Sbjct: 90  GPELLRMKDRHNRDYCLGPTHEEVITELAR----NELTSYKQLPINFFQIQTKFRDEVRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +     + +  ++++      D +        D        
Sbjct: 146 RFGVMRSREFIMKDAYSFHSNSDSLRQTYDVMHQAYCNVFDRIGLDYRP 194



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 36/132 (27%), Gaps = 21/132 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M++D       +       L+  GI   +     +  G +
Sbjct: 465 DDKGILWPESITPFSVAIIAMNYDKSEAVRDECDHLYNELKQLGIDVLLDDRKER-PGVK 523

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  ++ G        L+ K    G+                     +P  E
Sbjct: 524 FADCELLGIPHRLVVGDKGLKNNSLEYKYRKTGE------------------GEDVPKDE 565

Query: 481 LVSTVKKILQEN 492
            V  ++K+LQ N
Sbjct: 566 AVKFIRKVLQAN 577


>gi|160935092|ref|ZP_02082478.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753]
 gi|156866545|gb|EDO59917.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753]
          Length = 660

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/267 (10%), Positives = 77/267 (28%), Gaps = 8/267 (2%)

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           +G  +   +   +      + AN   E + +         +    +  + +      ++ 
Sbjct: 401 EGHLMCRPDQLEEEFKSCLQLANYMLETLGLAEDVSYRFSQWDPEDKDKYIGTPEQWDEA 460

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
            + +  I + +      +  +  ++     L+     V+        +   Q   +    
Sbjct: 461 QSAMKRILDHL--GIEYAIGVGEAAFYGPKLDIQIKNVFG---KEDTLITIQIDQLLAEK 515

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
            G    D          +  T        L + ++    +         V +  +     
Sbjct: 516 FGMEYVDADGKAKNPYIIHRTSIGCYERTLALLIEKYAGALPMWLMPEQVRVLPIS--EK 573

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            L K     + L+  GIR+      ++  G +++ A     P  +I G  E    ++ ++
Sbjct: 574 FLDKALEVDRELKAQGIRS-TADSRNEKIGYKIREAQMEKIPYMLIIGEKEVQENVVSVR 632

Query: 449 DLAKGKELSREIKNNESWREARVAQIT 475
               G   S  ++         + + T
Sbjct: 633 SRKDGVLGSMSLETFLEKALTEIREKT 659



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+   +   + +  +  G+   +TP +  SD   K     D    G+F L
Sbjct: 277 GLPILLPNGARVIQLLQRFVEDEEQKRGWLLTKTPYMAKSDLY-KLSGHWDHYKDGMFVL 335

Query: 74  QD--DDGQWISLRYDLTAPL 91
            D   D +  +LR  +T P 
Sbjct: 336 GDEEKDDEVFALRP-MTCPF 354


>gi|148381087|ref|YP_001255628.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932923|ref|YP_001385460.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153935084|ref|YP_001388867.1| threonyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166223333|sp|A7FY87|SYT_CLOB1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223334|sp|A5I6L8|SYT_CLOBH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148290571|emb|CAL84700.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152928967|gb|ABS34467.1| threonyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152930998|gb|ABS36497.1| threonine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 635

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 76/259 (29%), Gaps = 9/259 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  +     +  E + I+                EL            +  + +  +R
Sbjct: 381 DDAHLYMTKEQIKEEVVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLR 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           +     + I     +  G   + G   +  L   +    Q   +        R+D     
Sbjct: 441 E---ALDSIGKEYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIG 497

Query: 341 FKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
             G+              + R I  L    +       + PV +  M+         +  
Sbjct: 498 ADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFP-TWLAPVQVKLMNITDSQYDYLKKV 556

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + L+   IR E+    ++  G +++ A  +  P  +I G  E   G + ++    G   
Sbjct: 557 EEALKENNIRVEID-TRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLG 615

Query: 457 SREIKNNESWREARVAQIT 475
           +  ++      +  +   T
Sbjct: 616 AISLEEFIEKIKNEIKNKT 634



 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  +   G+  I TPL+  +++L       D   + ++  
Sbjct: 261 GFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLI-LNEALWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 319 TNIDDDDYAIKPMNCPG 335


>gi|257885297|ref|ZP_05664950.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821149|gb|EEV48283.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 645

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/443 (10%), Positives = 115/443 (25%), Gaps = 81/443 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D   + +F 
Sbjct: 259 SGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELY-KTSGHWDHYQEDMFP 317

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 318 PMDMGDGEMLVLRPMNCP-------HHMMVYKNTIHSYRELPIRIAEL------------ 358

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 359 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 414

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 415 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 464

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 465 FYGPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 524

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 525 RFVAYLTEVYKGAFPTWLA---------------------------------------PI 545

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +      +  + +    T+ LR      E+    ++  G +++ +  +  P 
Sbjct: 546 QATIIPVSVDAHGDYAYEIKERLQ-TKGLR-----VEVD-DRNEKMGYKIRASQTQKIPY 598

Query: 432 AIIQGTGERSRGMLQIKDLAKGK 454
            ++ G  E     + ++     +
Sbjct: 599 QLVVGDKELEDATVNVRRYGSKE 621


>gi|169823842|ref|YP_001691453.1| prolyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|226701290|sp|B0RZJ0|SYP_FINM2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167830647|dbj|BAG07563.1| prolyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 576

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 80/308 (25%), Gaps = 12/308 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         RI  ++ + +R   +NYG   I  P+ +  +   +        
Sbjct: 31  MIRKTAAGLYSYLPLGYRIVRKVENIVREEMDNYGSQEIHMPITQPREI-WEESGRWKTF 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              +F L+D + +   L         DL     +   +    I      YR     R   
Sbjct: 90  GPEMFKLKDRNNREFCLGPTAEEYFTDLVKGEIKSYKQLPLNIYQIQTKYRDEKRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
           +    F        D    +   A   M          +G+   +Y I   +   + G  
Sbjct: 150 NRSREFLMQDAYTFDVNEEAMGEAYMNMWRAYEVVFNRLGL---EYKIVAGDSGAMGGNS 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +   D     +      D         V   + +   +             + I+ 
Sbjct: 207 SHEFIALSDVGEGVICYSDDSDFAATDEKAYVYYQVNDENVEKLSSEKVLTP-NCKTIEE 265

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  FL++D    +  +  +V+G         +  +    +                   L
Sbjct: 266 VSDFLNVDAAHCLKAVDLMVEGKPVIVFIPGDRELNMSKLVSYLKCPEHEIEMMEEQDIL 325

Query: 300 EYYTGCVY 307
              +   +
Sbjct: 326 ALNSSPGF 333


>gi|182678768|ref|YP_001832914.1| prolyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|226699120|sp|B2IDI9|SYP_BEII9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|182634651|gb|ACB95425.1| prolyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 439

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 34/109 (31%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  ++   +R   +  G   +  P L+ +D L +     D  
Sbjct: 31  MIRQEAAGIYAWLPLGFRVLQKVEQIVREEMDRAGAIELLMPTLQLAD-LWRETGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   + +       D+   + R    ++  +       +  
Sbjct: 90  GPEMLRIKDRHERELLYGPTNEDMITEIFRAYVRSYRDLPKILYHIQWK 138



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 93/319 (29%), Gaps = 19/319 (5%)

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLR-----AIDKLDKFGLQGVKLLLGEGR 219
           +   + + + L  IL  I     D+   R  V+R       D       +    L     
Sbjct: 118 FRAYVRSYRDLPKILYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDLDEEGARLSYNKM 177

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                   K   LT+  +      +  DL      L +  +  +   K   +L +  E  
Sbjct: 178 FVAYLRIYKRMGLTAIPMRAETGPIGGDLSHEFIILADTGESAVFCNKDVLDLPIPDEHT 237

Query: 280 RKSGYNSNRI-KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
              G  S  I + +S      + +    +E+        E++   V      G +Y   +
Sbjct: 238 DYDGDLSPIIKQWTSLYAATEDVHDAARFESETPPEKRIERRGIEVGQVFYFGEKYSKPM 297

Query: 339 ------SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD------HD 386
                      +      + +G+SRL+ A+         I     V   T+        D
Sbjct: 298 RSLITGPDGSEKPFQGGSYGVGVSRLVGAIIEASHDEAGIIWPEAVAPFTVGLANLKVGD 357

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           + + +      + L   G+         +  G      D    P  II G    + G ++
Sbjct: 358 AATDAACAEIYERLEALGVDVLYDDTDDRPGGK-FAKLDLIGLPYQIIVGPKGLAEGKIE 416

Query: 447 IKDLAKGKELSREIKNNES 465
           +K  A G   +  I     
Sbjct: 417 MKTRATGARENLSIAAVIE 435


>gi|166154796|ref|YP_001654914.1| threonyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155671|ref|YP_001653926.1| threonyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336072|ref|ZP_07224316.1| threonyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|238687393|sp|B0B8F5|SYT_CHLT2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238687442|sp|B0BA34|SYT_CHLTB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|165930784|emb|CAP04281.1| threonyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931659|emb|CAP07235.1| threonyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 635

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/157 (8%), Positives = 45/157 (28%), Gaps = 2/157 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + + N ++D  + +++  G+  I+TP L   + L +     +   + +++L
Sbjct: 256 GMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRE-LWEISGHWENYKENMYTL 314

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D +  +++         Y      +                 +              
Sbjct: 315 T-VDEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELSGALSGLMRVRTF 373

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
               +       ++     + L  V      + +  +
Sbjct: 374 HQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYH 410



 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 38/351 (10%), Positives = 87/351 (24%), Gaps = 15/351 (4%)

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
                   +   ++      G  +      ++                M           
Sbjct: 263 RGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWENYKENMYTLTVDEEDYA 322

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN 222
                           L          + E   V R        GL  V+        D+
Sbjct: 323 IKPMNCPGCMLYYKTQLHSYREFPLR-IAEIGHVHRHELSGALSGLMRVRT----FHQDD 377

Query: 223 SGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           +  F     +  E ++I+     +     +    EL      G  G ++L  ++      
Sbjct: 378 AHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQGTIGSDDLWELAT--EAL 435

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD-----GL 337
                + +    I  G   + G   +  +   +    Q   +   +    R+D       
Sbjct: 436 KRALVKSQKPFIISPGEGAFYGPKIDIHVKDAINRTWQCGTIQLDMFLPERFDLKYTNAQ 495

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             +     +    F      L + ++  +           V I T+    ++    Q   
Sbjct: 496 GEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHVRIITVADRHEAR--AQELA 553

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +     GI   +   S+++   +++ A        I  G  E    +L ++
Sbjct: 554 KHFSQMGIIVSVD-SSNESVSKKIRNAQNMQVNYMITIGDKELETHLLAVR 603


>gi|73542636|ref|YP_297156.1| prolyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|114152236|sp|Q46X21|SYP_RALEJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|72120049|gb|AAZ62312.1| Prolyl-tRNA synthetase, bacterial [Ralstonia eutropha JMP134]
          Length = 573

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 49/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++ + +R      G   +  P+++ ++ L +     D+ 
Sbjct: 31  MIKKLGAGIYNYMPVGLRVIRKVENIVREEMNRAGAVELSMPVIQPAE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  L+D   +  +++    ++   +AR    ++  +       +             
Sbjct: 90  GPELLRLKDRHERDFAVQPTSEEVVTDIARSEIRSYKQLPVNFYQIQTKFRDERRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D      + +   M        +  G
Sbjct: 150 MRGREFTMKDAYSFDRDAEGLKKSYENMYDAYVRIFQRFG 189



 Score = 39.8 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 38/132 (28%), Gaps = 23/132 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  + +D      ++       L  AG+   +     +  G  
Sbjct: 462 DERGIIWPAAIAPFEVVVCPVGYDRSEAVKAEADRIHAELLAAGVDVIID-DRGERPGVM 520

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT-IPIS 479
               +    P  ++ G      G +                    ++  R AQ T + ++
Sbjct: 521 FADWELIGVPHRVVVGDRGLKEGKV-------------------EYQGRRDAQATQVAVA 561

Query: 480 ELVSTVKKILQE 491
           ++V  V+  + +
Sbjct: 562 DVVGHVRGQIGK 573


>gi|15605310|ref|NP_220096.1| threonyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789318|ref|YP_328404.1| threonyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237803010|ref|YP_002888204.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804932|ref|YP_002889086.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311401|ref|ZP_05353971.1| threonyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317702|ref|ZP_05358948.1| threonyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|255348963|ref|ZP_05380970.1| threonyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503502|ref|ZP_05381892.1| threonyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|7388284|sp|O84585|SYT_CHLTR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123731247|sp|Q3KLB6|SYT_CHLTA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6578108|gb|AAC68183.2| Threonyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167848|gb|AAX50856.1| threonyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273232|emb|CAX10145.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274244|emb|CAX11038.1| threonyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296436115|gb|ADH18289.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437044|gb|ADH19214.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437975|gb|ADH20136.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140477|gb|ADH97235.1| threonyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 635

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/157 (8%), Positives = 45/157 (28%), Gaps = 2/157 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + + N ++D  + +++  G+  I+TP L   + L +     +   + +++L
Sbjct: 256 GMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRE-LWEISGHWENYKENMYTL 314

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D +  +++         Y      +                 +              
Sbjct: 315 T-VDEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELSGALSGLMRVRTF 373

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
               +       ++     + L  V      + +  +
Sbjct: 374 HQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYH 410



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/351 (10%), Positives = 88/351 (25%), Gaps = 15/351 (4%)

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
                   +   ++      G  +      ++                M           
Sbjct: 263 RGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWENYKENMYTLTVDEEDYA 322

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN 222
                           L          + E   V R        GL  V+        D+
Sbjct: 323 IKPMNCPGCMLYYKTQLHSYREFPLR-IAEIGHVHRHELSGALSGLMRVRT----FHQDD 377

Query: 223 SGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           +  F     +  E ++I+     +     +    EL      G  G ++L  ++   +  
Sbjct: 378 AHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQGTIGSDDLWELAT--KAL 435

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD-----GL 337
                + +    I  G   + G   +  +   +    Q   +   +    R+D       
Sbjct: 436 KRALVKSQKPFIISPGEGAFYGPKIDIHVKDAINRTWQCGTIQLDMFLPERFDLKYTNAQ 495

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             +     +    F      L + ++  +           V I T+    ++    Q   
Sbjct: 496 GEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHVRIITVADRHEAR--AQELA 553

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +     GI   +   S+++   +++ A        I  G  E    +L ++
Sbjct: 554 KHFSQMGIIVSVD-SSNESVSKKIRNAQNMQVNYMITIGDKELETHLLAVR 603


>gi|15615703|ref|NP_244007.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125]
 gi|20139931|sp|Q9K866|SYT_BACHD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|10175763|dbj|BAB06860.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125]
          Length = 645

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/356 (12%), Positives = 94/356 (26%), Gaps = 19/356 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +         +      +  +E +         + D+               M   
Sbjct: 284 RYIVDK--EEKLGYQHVYTPVLASSELYKTSGHWDHYKDDMFPTMEMENEELVLRPMNCP 341

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
             +     +   Y         L G++ +  + G     +R+  +   D         +K
Sbjct: 342 HHMMVYKTEMRSYRQLPLRIAEL-GLMHRYEMSGAVSGLQRVRGMTLNDAHIFCRPDQIK 400

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                          +   L +     +      D EK   +     K     ++  +EL
Sbjct: 401 DEFVRVVRL-IQAVYEDFGLKNYSF-RLSYRDPEDKEKYFDDDNMWNKAQGMLKEAMDEL 458

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               E     G  +         VR        +    L F +        V        
Sbjct: 459 E--LEYFEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYVGE------ 510

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
             DG   R    +            +   L+  + +         V +  +  ++  L  
Sbjct: 511 --DGQPHRPVVVHRGVVSTM--ERFVAFLLEEYKGAFPTWLAPVQVQVIPVSPEA-HLEY 565

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +   + L+ AGIR E+     +  G +++ A  +  P  ++ G  E     + ++
Sbjct: 566 AKNVQETLQQAGIRVEID-ERDEKIGYKIREAQMQKIPYMLVLGDKEVEANGVNVR 620


>gi|257453020|ref|ZP_05618319.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|257467420|ref|ZP_05631731.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 593

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 12/164 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   ++ + IR   +  G   +  P+L+ ++ L +     +  
Sbjct: 55  MIKKLASGLYTYLPLGFRTLKKVENIIREEMDRAGSQELLMPVLQPAE-LWQESGRWNVM 113

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
            + +  L+D   +   L     ++   + R    ++ ++      Y I    R+E+    
Sbjct: 114 GEEMVRLKDRHQRDFVLGPTNEEVITDIVRNDISSYKSLP--INLYHIQTKVRDERRPRF 171

Query: 120 --HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  F             S +     M        E  G+K
Sbjct: 172 GLMRSREFIMKDAYSFHTSQESLDEEFENMKNTYTRIFERCGLK 215



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 23/128 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
                   +      V +   +  +++ +   +   + L    + A +        F   
Sbjct: 483 DEHGIIWPSALAPYLVDVIPANIKNAEQMQLAEKIYEQLNAEHLDAMLDDRDERPGFK-- 540

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            K AD    P  +I G    +  ++++K    G+                     IP+ E
Sbjct: 541 FKDADLIGFPFKVICGKK-AAENIVELKIRKTGE------------------TFEIPVDE 581

Query: 481 LVSTVKKI 488
           ++S +K +
Sbjct: 582 IISKIKDL 589


>gi|297748711|gb|ADI51257.1| Threonyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749591|gb|ADI52269.1| Threonyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 660

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/157 (8%), Positives = 45/157 (28%), Gaps = 2/157 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + + N ++D  + +++  G+  I+TP L   + L +     +   + +++L
Sbjct: 281 GMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRE-LWEISGHWENYKENMYTL 339

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D +  +++         Y      +                 +              
Sbjct: 340 T-VDEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELSGALSGLMRVRTF 398

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
               +       ++     + L  V      + +  +
Sbjct: 399 HQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYH 435



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/351 (10%), Positives = 88/351 (25%), Gaps = 15/351 (4%)

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
                   +   ++      G  +      ++                M           
Sbjct: 288 RGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWENYKENMYTLTVDEEDYA 347

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN 222
                           L          + E   V R        GL  V+        D+
Sbjct: 348 IKPMNCPGCMLYYKTQLHSYREFPLR-IAEIGHVHRHELSGALSGLMRVRT----FHQDD 402

Query: 223 SGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           +  F     +  E ++I+     +     +    EL      G  G ++L  ++   +  
Sbjct: 403 AHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQGTIGSDDLWELAT--KAL 460

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD-----GL 337
                + +    I  G   + G   +  +   +    Q   +   +    R+D       
Sbjct: 461 KRALVKSQKPFIISPGEGAFYGPKIDIHVKDAINRTWQCGTIQLDMFLPERFDLKYTNAQ 520

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             +     +    F      L + ++  +           V I T+    ++    Q   
Sbjct: 521 GEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHVRIITVADRHEAR--AQELA 578

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +     GI   +   S+++   +++ A        I  G  E    +L ++
Sbjct: 579 KHFSQMGIIVSVD-SSNESVSKKIRNAQNMQVNYMITIGDKELETHLLAVR 628


>gi|16272670|ref|NP_438888.1| prolyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260579822|ref|ZP_05847652.1| prolyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174537|sp|P43830|SYP_HAEIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|1573733|gb|AAC22388.1| prolyl-tRNA synthetase (proS) [Haemophilus influenzae Rd KW20]
 gi|260093106|gb|EEW77039.1| prolyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 572

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLG 189



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRTGEKEMISKDKLLSVLNEK 568


>gi|297617667|ref|YP_003702826.1| threonyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145504|gb|ADI02261.1| threonyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 636

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 2/90 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + +  R  +   G+  I+TP++  + SL +     +   + ++  
Sbjct: 261 GFPFFLPKGMIIRNELENFWRQEHVKAGYQEIKTPII-LNRSLWEKSGHWEHYRENMY-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIV 103
              D +  +++            +N  +  
Sbjct: 319 TTIDEEDYAVKPMNCPGGILVYKQNLHSYR 348



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 37/103 (35%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                 R AG+R E  L S K  G +++    +  P  +
Sbjct: 534 WLAPVQVRIIPITERHHGYAVELEAGFREAGLRVESDLRSEK-VGYKIREGQLQRIPYLL 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E     + ++   +G   ++ +    +  +  +A   +
Sbjct: 593 VVGDKETENKTVSVRKRKEGDLGAQPVAEFLNRIKKEIAGKVV 635


>gi|289207688|ref|YP_003459754.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943319|gb|ADC71018.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 570

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/157 (9%), Positives = 40/157 (25%), Gaps = 4/157 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            L  G        +R+  R+ + +R      G   +  P ++ ++ L +     D     
Sbjct: 34  RLAAGLYTWLPLGLRVLRRVENIVREEMNRAGALEVLMPAVQPAE-LWQESGRWDFYGAE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +         ++   L R    ++  +       +                
Sbjct: 93  LLRLKDRHERDFCFGPTHEEVITDLVRREIRSYRQLPVNYYQIQTKFRDERRPRFGIMRA 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
           +               + +     M D    +  +  
Sbjct: 153 REFLMKDAYSFHLDADSLSRTYQQMHDAYCRIFERCG 189


>gi|301169449|emb|CBW29049.1| prolyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 572

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLG 189



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRTGEKEMISKDKLLSVLNEK 568


>gi|255507180|ref|ZP_05382819.1| threonyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525626|emb|CBJ15104.1| threonyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435188|gb|ADH17366.1| threonyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438907|gb|ADH21060.1| threonyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 635

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/157 (8%), Positives = 45/157 (28%), Gaps = 2/157 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + + N ++D  + +++  G+  I+TP L   + L +     +   + +++L
Sbjct: 256 GMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRE-LWEISGHWENYKENMYTL 314

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D +  +++         Y      +                 +              
Sbjct: 315 T-VDEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELSGALSGLMRVRTF 373

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
               +       ++     + L  V      + +  +
Sbjct: 374 HQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYH 410



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/354 (11%), Positives = 88/354 (24%), Gaps = 17/354 (4%)

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
                   +   ++      G  +      ++                M           
Sbjct: 263 RGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEISGHWENYKENMYTLTVDEEDYA 322

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN 222
                           L          + E   V R        GL  V+        D+
Sbjct: 323 IKPMNCPGCMLYYKTQLHSYREFPLR-IAEIGHVHRHELSGALSGLMRVRT----FHQDD 377

Query: 223 SGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           +  F     +  E ++I+     +     +    EL      G  G ++L  ++      
Sbjct: 378 AHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQGTIGSDDLWELAT--EAL 435

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD-----GL 337
                + +    I  G   + G   +  +   +    Q   +   +    R+D       
Sbjct: 436 KRALVKSQKPFIISPGEGAFYGPKIDIHVKDAINRTWQCGTIQLDMFLPERFDLKYTNAQ 495

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             +     +    F      L + ++  +           V I T+    ++    Q   
Sbjct: 496 GEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHVRIITVADRHEAR--AQELA 553

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG--MLQIKD 449
           +     GI   +   S+++   +++ A        I  G  E       ++I+D
Sbjct: 554 KHFSQMGIIVSVD-SSNESVSKKIRNAQNMQVNYMITIGDKELETHLLAVRIRD 606


>gi|238650930|ref|YP_002916786.1| prolyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511617|sp|C4K2D7|SYP_RICPU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238625028|gb|ACR47734.1| prolyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 426

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/459 (10%), Positives = 125/459 (27%), Gaps = 65/459 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I + +R      G   +  P ++ +    +     D  
Sbjct: 31  MIRQQAAGIYTWLPLGLKVLKNIENIVRLNMNKAGALEVLMPCIQPAHLWMES-GRFDNY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +   QD        R+D T                                    F 
Sbjct: 90  GKEMLKFQD--------RHDNT----------------------------------LLFG 107

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              +  + ++      +  ++   +         +       +  R+ L        ++ 
Sbjct: 108 PTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINE 167

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++ +     + +A        +   + L        + +   G NL+ E   I+    + 
Sbjct: 168 ENAVKTYNQMYKAY-------INAFRDLGVFAIPVIADNGPIGGNLSHE-FHIIAE--TG 217

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +      + ++ +K     +    E+               + +++   +   E  +   
Sbjct: 218 ESTIYYDKKFKTLKDNPDID--VEEIKSWYAAAE------EKYEVNKLPISEQEITSSKG 269

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            E    F + ++    V   ++     Y  L               +         +   
Sbjct: 270 IEVGHIFYIGSK--YSVNMNALINDE-YGKLTPIEMSSYGIGISRLVAAIIEANCDEKGI 326

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +++      LI    HDS  +   +M  + L    I        ++  G++    D 
Sbjct: 327 IWPSSVAPFKVSLINLNIHDSKCVELAEMAYKELSDKNIEVLYDDTEAR-PGSKFATHDL 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P  II G  + +  ++ +KD   G     E+ +  S
Sbjct: 386 IGSPHQIIIGPKKAANNIVALKDRKSGVIEDIEVGSLMS 424


>gi|146304959|ref|YP_001192275.1| glycyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145703209|gb|ABP96351.1| glycyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 571

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 66/548 (12%), Positives = 152/548 (27%), Gaps = 97/548 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIY--ENYGFD-PIETP------LLE---YSDSLGKFLP 61
           G  D      RI+N+I+++ R I+  EN  F   IETP      +LE   + ++    + 
Sbjct: 29  GLYDIGPVGARIKNKIINTWRKIFVEENSEFVVEIETPMITPSKVLEASGHVENFTDPIV 88

Query: 62  D---------EDRPNKGVFSLQDD------------------------------------ 76
           +          D   + +  +  +                                    
Sbjct: 89  ECTKCHKIYRADHLVEEMLKINVERLKPSELTSLISEKGLKCPSCGGDLGEVRSFNLLFA 148

Query: 77  ------DGQWISLRYDLTA-----PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
                  G    LR + TA        R        +       ++G V RNE       
Sbjct: 149 TNIGPYSGTTGYLRPE-TAQGMFTSFKRVYEATRQRLP--LGIAQVGRVARNEISPRQGL 205

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
            +  +  +  V    +  D  +  +     E   +   D  +       +  + E I   
Sbjct: 206 VRMREFTIMEVEFFIDPDDRNVPWLDRYYNEEFRVLFGDAKVKGLKPATMK-VKEMIEEG 264

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                     +  A   +   G+        +          + A+ +S+  D +V  + 
Sbjct: 265 LLVNPWMGFWMASASRFVQALGISK------DSFYFEEKLPEERAHYSSQTFDQIVEIMG 318

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISEL-----------VRKSGYNSNRIKISST 294
             +E S H        +   +    +L V  +            +       +  ++   
Sbjct: 319 EKVEISGHAYRGNYDLSRHSKFSNEDLTVFKKFDQPRTVVKKTVIVNRDRFKDNPELQKE 378

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           ++  +   +    E +L   V    +    F  +      +  +  +     P+ G    
Sbjct: 379 VMMLVSGKSPEQVEELLNKQVQVAGRPLSEFVRIMNREEKEHGIKFYPHVVEPSFGVERC 438

Query: 355 ISRLIVALKSLESST-----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           +   +++    +                V +  +    + + K +    +L  +G + E+
Sbjct: 439 LYLSVLSAYREKKDRVVLALPKDLAPYQVAVFPLLERDELIKKAREIYNLL--SG-KYEV 495

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               + + G +    D    P A+       S   + I+D     ++  +  + ES  + 
Sbjct: 496 LFDDAGSIGKRYARVDEIGVPYAVTVDPQTLSDDSVTIRDRDSWSQIRIKTSDLESVMDK 555

Query: 470 RVAQITIP 477
             +     
Sbjct: 556 LFSGQDFS 563


>gi|145628390|ref|ZP_01784191.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145638474|ref|ZP_01794084.1| prolyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|144980165|gb|EDJ89824.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145272803|gb|EDK12710.1| prolyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309751606|gb|ADO81590.1| Prolyl-tRNA synthetase [Haemophilus influenzae R2866]
 gi|309973773|gb|ADO96974.1| Prolyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 572

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLG 189



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 ENGEIEYKNRRTGEKEMISKDQLLSVLNEK 568


>gi|226950568|ref|YP_002805659.1| threonine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254783516|sp|C1FKN0|SYT_CLOBJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226841746|gb|ACO84412.1| threonine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 635

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/368 (12%), Positives = 98/368 (26%), Gaps = 14/368 (3%)

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
              +R E    G         ++                M  T    G            
Sbjct: 277 ESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDGDYAIKPMNCPGG 336

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
             +    +         +L+E  IV R        GL  V+        D++  +     
Sbjct: 337 ILVYKNSMHSY-RDLPLRLSELGIVHRHELSGALHGLMRVR----CFTQDDAHLYMTKEQ 391

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           +  E + I+                EL            +  + +  +R+     + I  
Sbjct: 392 IKEEIVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLRE---ALDSIGK 448

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT-- 349
              +  G   + G   +  L   +    Q   +        R+D       G+       
Sbjct: 449 EYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMV 508

Query: 350 --GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                  + R I  L    +       + PV +  M+         +   + L+   IR 
Sbjct: 509 HRTIYGSVERFIGILIEQYAGAFP-TWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRV 567

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E+    ++  G +++ A  +  P  +I G  E   G + ++    G   +  ++      
Sbjct: 568 EID-TRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKI 626

Query: 468 EARVAQIT 475
           +  +   T
Sbjct: 627 KNEIKNKT 634



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  +   G+  I TPL+  +++L       D   + ++  
Sbjct: 261 GFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLI-LNEALWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 319 TNIDDGDYAIKPMNCPG 335


>gi|225857248|ref|YP_002738759.1| threonyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254783542|sp|C1CLX1|SYT_STRZP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225725171|gb|ACO21023.1| threonyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 647

 Score = 62.5 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/382 (10%), Positives = 98/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIV--NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            V                         +  T    +     P   + +     G      
Sbjct: 455 GVNYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGED---- 510

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                    +   +     S       + +++ + +         V +  +  +   +  
Sbjct: 511 --------HRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVS-NEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 619 GQKETQTVSVDNFVQAILADIA 640



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|322697146|gb|EFY88929.1| threonyl-tRNA synthetase, putative [Metarhizium acridum CQMa 102]
          Length = 759

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 55/495 (11%), Positives = 134/495 (27%), Gaps = 51/495 (10%)

Query: 3   KKTKLRAELP--RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           K  KL    P   G         RI N I   +R  Y   G+D + +PL+ Y   L K  
Sbjct: 307 KNQKLFWFSPLSPGSPFFLPHGTRIFNAIQAMLREQYWMRGYDEVHSPLM-YDAQLWKTS 365

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   + +F +        +   D  A  A        +     +          E  
Sbjct: 366 GHWDHYQEDMFRVPLKHTHGAA--PD--ASAA--------SGPDASKDANKPADKDGENA 413

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +  Q     +  +                 +L             + +R    G L 
Sbjct: 414 EVAKLEQERLFALKPMNCPGHALMFASEERSYRSLP-----WRVADFSVLHRNEASGALT 468

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +      K  +    +          L+G+   +    T     F    +   +     
Sbjct: 469 GLTRV--RKFQQDDAHIFCTIDQVTDELRGLFKFMTHVYTMFGFPFKLKLSTRPDS---- 522

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                +          + +K  +   KG + ++   +           + +   + R  +
Sbjct: 523 ----YMGKLSDWDAAEDRLKKALQEFKGDDWVINPGDG--AFYGPKIDVTVHDALGREFQ 576

Query: 301 YYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-NVPATGFSIGISRL 358
             T    ++    F ++    +     + G G     + S       +           +
Sbjct: 577 CATIQLDFQLPQNFNLLYRTNESTADRAKGEGEEEGDIPSGMARPVMIHRAVIGSFERFM 636

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + ++              V++  +  D++     +    +L  A + A++ +  +    
Sbjct: 637 GILIEHFAGKWPFWLSPRQVMVIPIMKDAE--DYAREVRDILHDAKLYADVDVSGN-TLQ 693

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++ A        ++ G  E  +  + I++                   ++     I +
Sbjct: 694 KKIRAAQLAQYNFVMVVGAEEIEKRAVNIRNRDD--------------PSSQQKGAMIDL 739

Query: 479 SELVSTVKKILQENK 493
            ++V  + ++  E +
Sbjct: 740 DDVVKRLVELKAERR 754


>gi|294619108|ref|ZP_06698603.1| threonyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291594769|gb|EFF26151.1| threonyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 646

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/443 (10%), Positives = 114/443 (25%), Gaps = 81/443 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D   + +F 
Sbjct: 259 SGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELY-KTSGHWDHYQEDMFP 317

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 318 PMDMGDGEMLVLRPMNCP-------HHMMVYKNTIHSYRELPIRIAEL------------ 358

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 359 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 414

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 415 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 464

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 465 FYGPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 524

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 525 RFVAYLTEVYKGAFPTWLA---------------------------------------PI 545

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +      +  + +     + LR      E+    ++  G +++ +  +  P 
Sbjct: 546 QATIIPVSVDAHGDYAYEIKERLQM-KGLR-----VEVD-DRNEKMGYKIRASQTQKIPY 598

Query: 432 AIIQGTGERSRGMLQIKDLAKGK 454
            ++ G  E     + ++     +
Sbjct: 599 QLVVGDKELEDATVNVRRYGSKE 621


>gi|301794619|emb|CBW37067.1| threonyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 96/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIV--NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 619 GQKETQTVSVDNFVQAILADIA 640



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|284031290|ref|YP_003381221.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283810583|gb|ADB32422.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 673

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 17/120 (14%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +  +      +         L+  GIR E+     +    +++ A +   P 
Sbjct: 569 PPWLAPVQVIGIPITDGHVDYLYQVAAQLKAQGIRIEIDASDDR-MQKKIRNAQKAKVPY 627

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQITIPISELVSTVKKILQ 490
            +I G  + + G +  +    G + +   I +               ++E+V +V+K +Q
Sbjct: 628 MLIAGDEDMAAGSVSFRY-RDGSQKNGIPIAD--------------AVAEIVESVQKRVQ 672


>gi|221232374|ref|YP_002511527.1| threonyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|254783539|sp|B8ZM32|SYT_STRPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|220674835|emb|CAR69409.1| threonyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/382 (10%), Positives = 98/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIV--NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            V                         +  T    +     P   + +     G      
Sbjct: 455 GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGED---- 510

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                    +   +     S       + +++ + +         V +  +  +   +  
Sbjct: 511 --------HRPVMIHRGAISTMERFTAILIENYKGAFPTWLAPHQVTLIPVS-NEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 619 GQKETQTVSVDNFVQAILADIA 640



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|145630468|ref|ZP_01786248.1| frataxin-like protein [Haemophilus influenzae R3021]
 gi|144983858|gb|EDJ91300.1| frataxin-like protein [Haemophilus influenzae R3021]
          Length = 572

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKIIREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              ++    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQVYSNIFNRLG 189



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRTGEKEMISKDKLLSVLNEK 568


>gi|331007686|ref|ZP_08330821.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418506|gb|EGG93037.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 579

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 34/106 (32%), Gaps = 4/106 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  ++   IR      G   +  P+++ ++ L +           
Sbjct: 34  KLASGLYTWMPLGLRVLRKVEHIIREEMNKSGAQEVLMPVVQPAE-LWQESGRWQEYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +  ++D   +   L     ++   L R    ++  +       +  
Sbjct: 93  LLRIKDRHQREFCLGPTHEEVITDLVRNDVNSYKQLPANFYQIQTK 138



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 26/92 (28%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
                 +    K  +  + L+ AG             G  L   +    P  I+ G    
Sbjct: 488 INAHKSAAVSEKCDVLYKELQAAGYDVIYMDEPKARLGVMLADTELVGIPHRIVVGDRGL 547

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G ++ K     ++   +  +   +  A+  
Sbjct: 548 ENGQVEYKGRRDSEKQEIDAGSVVDFLTAQAD 579


>gi|289642063|ref|ZP_06474216.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508136|gb|EFD29082.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 610

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 41/120 (34%), Gaps = 19/120 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +              + L  AGIRAE+   S      +++ A+++  P   
Sbjct: 501 WLAPVQVRVVPISDRQADGAAAVWRRLVDAGIRAELD-DSDNTMQAKIRRAEQQKVPYVA 559

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E     + ++                     R    + P+ EL+  + +++ +  
Sbjct: 560 VIGDRELENDSVSVR------------------ARGRRNLGSRPVPELIEKLGRLIADRA 601



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 1/77 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G          +R+ +    R +   +G+  I TP +  SD               ++S
Sbjct: 221 KGLPLWLPNGTIVRDELETWAREVERAHGYQRIVTPHITKSDLYY-ISGHLPYYADDLYS 279

Query: 73  LQDDDGQWISLRYDLTA 89
             D DG+   L+     
Sbjct: 280 PIDIDGEEYYLKPMNCP 296


>gi|69245748|ref|ZP_00603614.1| Threonyl-tRNA synthetase, class IIa [Enterococcus faecium DO]
 gi|257880251|ref|ZP_05659904.1| threonyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883051|ref|ZP_05662704.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257891365|ref|ZP_05671018.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257893638|ref|ZP_05673291.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614441|ref|ZP_05712211.1| threonyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260560451|ref|ZP_05832625.1| threonyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293563269|ref|ZP_06677719.1| threonyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294621403|ref|ZP_06700575.1| threonyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314939207|ref|ZP_07846461.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942550|ref|ZP_07849386.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314948402|ref|ZP_07851791.1| threonyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951256|ref|ZP_07854311.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314991679|ref|ZP_07857149.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996805|ref|ZP_07861818.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195641|gb|EAN10081.1| Threonyl-tRNA synthetase, class IIa [Enterococcus faecium DO]
 gi|257814479|gb|EEV43237.1| threonyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818709|gb|EEV46037.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257827725|gb|EEV54351.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830017|gb|EEV56624.1| threonyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260073453|gb|EEW61781.1| threonyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291599050|gb|EFF30095.1| threonyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291604721|gb|EFF34205.1| threonyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313589100|gb|EFR67945.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313593770|gb|EFR72615.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596608|gb|EFR75453.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598686|gb|EFR77531.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313641458|gb|EFS06038.1| threonyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645194|gb|EFS09774.1| threonyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 646

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/443 (10%), Positives = 114/443 (25%), Gaps = 81/443 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D   + +F 
Sbjct: 260 SGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELY-KTSGHWDHYQEDMFP 318

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 319 PMDMGDGEMLVLRPMNCP-------HHMMVYKNTIHSYRELPIRIAEL------------ 359

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 360 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 415

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 416 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 465

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 466 FYGPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 525

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 526 RFVAYLTEVYKGAFPTWLA---------------------------------------PI 546

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +      +  + +     + LR      E+    ++  G +++ +  +  P 
Sbjct: 547 QATIIPVSVDAHGDYAYEIKERLQM-KGLR-----VEVD-DRNEKMGYKIRASQTQKIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGK 454
            ++ G  E     + ++     +
Sbjct: 600 QLVVGDKELEDATVNVRRYGSKE 622


>gi|322388243|ref|ZP_08061847.1| threonine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140915|gb|EFX36416.1| threonine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/395 (12%), Positives = 101/395 (25%), Gaps = 40/395 (10%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NL +E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNL-NEYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A + +  P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVR-- 616

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                           R  +    T+ + E V+T+
Sbjct: 617 ----------------RYGQKETNTVSVDEFVATI 635



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|302871195|ref|YP_003839831.1| prolyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574054|gb|ADL41845.1| prolyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 572

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/272 (11%), Positives = 69/272 (25%), Gaps = 13/272 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         R+  +I + +R   +  G   +    L   + L +  
Sbjct: 26  MLRSGFMR-QLSSGIYVYLPLGYRVLRKIENIVREEMDRSGAQEVHMSALMPKE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
                    +F ++D + +   L     +    + R    ++  +       +       
Sbjct: 84  GRWAIFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRNEISSYRDLPKILYQIQTKFRDER 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      F        D      + +  +M        +  G+             
Sbjct: 144 RPRFGVMRCREFTMKDAYSFDIDEKGLDISYQKMYDAYVRIFKRCGLDVKIVEADTGAMG 203

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                   +     +              L+K     + +   E   +    +T      
Sbjct: 204 GASSHEFMVPSSVGEAEIAYCKACGYAANLEKAECLDIPVETNEDLKEKQEVYTPNVR-- 261

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
              I+ +V+FLSID  K +  +          
Sbjct: 262 --TIEELVNFLSIDSTKFVKTMIYKADDKFVA 291



 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 48/167 (28%), Gaps = 3/167 (1%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
              +G       +    FG V    + +          +     +  I   +   +    
Sbjct: 403 GIEVGHIFKLGTKYTEAFGCVYTDEKGEKKFMIMGCYGIGINRTAAAIIEQMHD-EDGII 461

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +     +++     D +         + L+  G+   +     +  G + K AD  
Sbjct: 462 WPITVAPYEVIVVPVNVKDENQSKIAFEIYENLQKNGVEVLIDDRDERA-GVKFKDADLI 520

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             P  +  G    S G ++I++    +    EI N   +    + Q 
Sbjct: 521 GIPFRVTVGKK-VSEGKIEIRNRRTKESFEFEIDNAVEFIINLIKQE 566


>gi|182419388|ref|ZP_02950640.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237666667|ref|ZP_04526652.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376719|gb|EDT74291.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657866|gb|EEP55421.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 643

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/275 (9%), Positives = 72/275 (26%), Gaps = 16/275 (5%)

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D       + ++    +G  +      +   +  +       +   + EK +++      
Sbjct: 384 DGHLIVTPEQLEEEF-KGVVELIQYLMETLGIAEKITYRFSKWDPNNTEKYINDPDAWNH 442

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                    + L +    V      +          R +      ++   + F +     
Sbjct: 443 TQDTMRNILDHLKI--NYVEADDEAAFYGPKLDLQFRNVHGKEDTLFTVQIDFALAERFD 500

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                         D    + +   +  +        L + ++    +         V  
Sbjct: 501 MTY----------IDKNGEKKRPYIIHRSSIGCYERTLAMLIEEYAGAFPTWLSP--VQA 548

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +          +  T+ L+  GIR E    + K  G +++ A     P  ++ G  E 
Sbjct: 549 KILPLSDKYNDYAEKVTKALKDKGIRVETDYRAEK-IGYKIREARLERTPYILVVGEKEA 607

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               + ++      E + ++        + VA   
Sbjct: 608 ENNQVSVRSRKNDDEGAMDLNAFVDRIVSEVANKE 642



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   + +  E  G+   +TPL+  SD   K     D    G+F L
Sbjct: 260 GLPLLMPKGAKIVQTLQRWVEDEEEKRGYVLTKTPLMAKSDLY-KVSGHWDHYKDGMFVL 318

Query: 74  QD--DDGQWISLRYDLTAPL 91
            D   D +  +LR  +T P 
Sbjct: 319 GDEEKDDEVFALRP-MTCPF 337


>gi|13542113|ref|NP_111801.1| threonyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|22654129|sp|Q978W0|SYT_THEVO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14325544|dbj|BAB60447.1| tRNA synthetase Thr [Thermoplasma volcanium GSS1]
          Length = 660

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/467 (10%), Positives = 127/467 (27%), Gaps = 53/467 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF         IR  ++  +  +    G+  + TP + + D++ K      +    ++  
Sbjct: 245 GFPMYTPNGQIIRKELIKYMDYVNGKNGWTDVWTPHV-FKDTIWKQSGHYAKYKPNMYLF 303

Query: 74  QDDDGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
              DG    ++       +A +    +     P +    G V+R EK G        +  
Sbjct: 304 VLPDGDSYGIKPMNCPGHIAIFARRKYSYRDLPVKYSEPGTVYRYEKSGEVGGLTRPRA- 362

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                         M  ++ +    +G+ R  +     N      I     L   DK + 
Sbjct: 363 ---FTQDDGHEFIRMDQIVGEIKTLLGMVRETFTTVFGN------IEMAFDLSVIDKEHP 413

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              +L  + K     ++G++    E    +S +     +      + +   +        
Sbjct: 414 ENYLLSYVCKDCGNRVEGLRGTDIECPVCHSHNMDPDFSTWDNATEQLRQAMDSMGITYK 473

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               E                               + +   + R  +  T         
Sbjct: 474 EYPGEA----------------------AFYGPKIDVHVKDALGRMWQLST--------- 502

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
             +  +   P+ FG               +   +    +      + + L+         
Sbjct: 503 --IQVDFFMPINFGLTYTNSE----GKEERVVIIHRAIYGSYERFMAILLEHFAGKLPTW 556

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  +  +   +      +   + L  AGIR+ +  G       ++K    +     
Sbjct: 557 LTPIQTYVIPVGTANA--EYARKVNKSLLDAGIRSVVDDGPD-TVSKKIKMIHDQRPSYI 613

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           ++ G  E     + +++   GK  +  +       +  + + ++  +
Sbjct: 614 VVVGAKEEQDNTVTVRN-RAGKSKTYGMNEFLEIIKNEIEKRSVGQA 659


>gi|282864200|ref|ZP_06273256.1| threonyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282560687|gb|EFB66233.1| threonyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 658

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 53/458 (11%), Positives = 113/458 (24%), Gaps = 66/458 (14%)

Query: 49  LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAE---NFDTIVF 104
            LE+ +   K    +      +FS  D+ G  +++        + R   E          
Sbjct: 248 HLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKG--GVIRRAMEDYSRRRHEEE 305

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
                      + +         +    +       +  D  +  M       +   R  
Sbjct: 306 GYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGR 365

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
            +  +  R    G + +    G      R       D       + +   L     D + 
Sbjct: 366 SYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTREQMAEEL-----DRTL 420

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV----- 279
            F           D  +   + D EK        V    A E+    L  ++E       
Sbjct: 421 TFVLNLLRDYGLTDFYLELSTKDPEK-------FVGSDEAWEEATETLRQVAEKQGLPLV 473

Query: 280 -----RKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
                         ++    I R  +  T    +     F +            V     
Sbjct: 474 PDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGTKQRPVM---- 529

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                       +    F        V L+    +      + PV    +      +   
Sbjct: 530 ------------IHRALFGSIERFFAVLLEHYAGAFPVW--LAPVQAVGIPIGDTHIPYL 575

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           Q +    R  G+R E+   S +    +++   +   P  +I G  + + G +  +    G
Sbjct: 576 QEFAAEARKKGLRVEVDASSDR-MQKKIRNHQKAKVPFMVIVGDDDMNAGTVSFRH-RDG 633

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            + +                  IP  E ++ +  +++ 
Sbjct: 634 SQENG-----------------IPRDEAIAKLVDLVER 654


>gi|332201058|gb|EGJ15129.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 97/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIV--NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G  S      +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADSEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 619 GQKETQTVSVDNFVQAILADIA 640



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|307331523|ref|ZP_07610636.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306882840|gb|EFN13913.1| prolyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 573

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 5/144 (3%)

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITT 382
                  + D L    K   V    + +G+SR + AL      ES     +E+ P  +  
Sbjct: 423 RKYADAFQLDVLGQNGKPARVTMGSYGVGVSRAVAALAEQTHDESGLCWPREVAPADVHI 482

Query: 383 MDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +       ++      + L TAG+R  +   +  + G +   A+    P  ++ G     
Sbjct: 483 VAAGKALQTELALDIAEKLGTAGVRVMVDDRAGVSPGVKFTDAELIGVPTILVVG-RGAK 541

Query: 442 RGMLQIKDLAKGKELSREIKNNES 465
            G++++KD   G+     I    S
Sbjct: 542 DGVVELKDRRTGEREELPIDEAIS 565



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                 ++   +   +R   +  G   +  P L   E  +  G+     D     +F ++
Sbjct: 49  WLPIGKKVLENVARIVREEMDAIGAQEVLLPALLPREPYEVSGR----WDEYGDLLFRIK 104

Query: 75  DDDGQWISLRY 85
           D  G    L  
Sbjct: 105 DRKGADYLLGP 115


>gi|282850470|ref|ZP_06259849.1| threonine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579963|gb|EFB85367.1| threonine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 636

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++ ++ ++ I TP++  S  L +     D   + +++ 
Sbjct: 263 GFPFFLPKGMALRNELENFWREVHHDFDYEEIRTPII-LSKHLWETSGHWDHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              D +  +++          V +N            
Sbjct: 322 II-DDEEYAIKPMNCPGGI-LVYQNEMHSYRDFPLRY 356



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +      +   +   + +    +R E+    S+  G +++ A     P  +
Sbjct: 536 WMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVD-DRSEKIGYKIRQAQMAKVPYML 594

Query: 434 IQGTGERSRGMLQIK 448
           + G  E   G + ++
Sbjct: 595 VVGDKEVEEGTVNVR 609


>gi|68249330|ref|YP_248442.1| prolyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|229844600|ref|ZP_04464739.1| prolyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|81336245|sp|Q4QMG5|SYP_HAEI8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68057529|gb|AAX87782.1| prolyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|229812314|gb|EEP48004.1| prolyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 572

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFRRLG 189



 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGIPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRTGEKEMISKDKLLSVLNEK 568


>gi|34496029|ref|NP_900244.1| prolyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|81834766|sp|Q7P0J3|SYP_CHRVO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|34101883|gb|AAQ58250.1| prolyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 568

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G        +R+  ++   IR      G   +  P+++ ++ L +  
Sbjct: 26  MIRAGFIRKQA-AGIYSWMPMGLRVVRKVETIIREEMNRAGGIEVSLPVVQPAE-LWQET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D     +   +D   +  +L+    ++   +AR    ++  +       +       
Sbjct: 84  GRWDAMGAELLRFKDRHERDFALQPTAEEVITDIARRELRSYRALPKNFYQIQTKFRDER 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F        D     A  +   M        + +G
Sbjct: 144 RPRFGVMRGREFTMKDAYSFDRSAEDAGKSYDNMYAAYRRIFDRLG 189



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/112 (8%), Positives = 28/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V++  + +D               L+  G+   +     +  G  
Sbjct: 458 DDKGMIWPDSIAPFAVVVCPVGYDRSEAVKEAADKLYADLQARGVDVMLD-DRGERPGAM 516

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  +  G      G ++ +     +  +           +++A
Sbjct: 517 FADWELIGAPHRVTIGDRGLKEGKVEYQHRRDSEATAVAADAILEHVLSKLA 568


>gi|32477337|ref|NP_870331.1| threonyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32447888|emb|CAD77406.1| threonyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 830

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/470 (11%), Positives = 122/470 (25%), Gaps = 40/470 (8%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
              K  R+R  + D +R    + G+DP+ +P +   E  ++ G F    D     +F   
Sbjct: 375 WLPKGARVRVTLEDFLRRELLSRGYDPVYSPHIGRVEMYETSGHFPYYRDSQFAPLF--- 431

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCR----TYRIGPVFRNEKHGPGRFRQFIQ 130
              G  +         L    +   D                 VF  +            
Sbjct: 432 ---GSEVG-------GLLDAWSTRLDKDDLSKDDEDKLIAAAEVFGVKLPDYKPSASNDA 481

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                           +  M       +   +   +  +  R    G + +    G+   
Sbjct: 482 KKDVLHRWQLNHERYLLKPMNCPHHCQIFGAQPRSYRQLPLRLFEFGTVYRHEQTGELNG 541

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
             R+  L   D         V+        + +    +   L   ++ + +         
Sbjct: 542 MMRVRGLTQDDAHIFCTADQVEEEFR-ATIELTKFVLESVGLDDYRVQLSLRDPDSSKYV 600

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR-IKISSTIVRGLEYYTGCVYEA 309
              E ++  +G + G    + L    E    + Y       +   I R  +  T    + 
Sbjct: 601 GSEENWDHAEGALRGVLEQSGLSFNEEPGEAAFYGPKADFMVRDCIGRSWQLGT---VQL 657

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
               P   + +                  +  +   +    F        + ++    + 
Sbjct: 658 DYNLPERFKLEYKG------------NDNATHRPVMIHRAPFGSLERFTGMLIEHFAGAF 705

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   + +  +     S+       + L  AG +  +     K    +++ A     
Sbjct: 706 PMWLSPEQIRV--LPLSDKSVEYATAVAKQLDEAGFKVTVDASDGK-VQAKIRNAQIDLV 762

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
               + G  E   G + ++D  +G   S  IK   +  +  V    +  +
Sbjct: 763 NYMAVVGPKEAESGQVALRDRIEGDLGSMPIKEAIARLQKEVETRQVRQA 812


>gi|150018038|ref|YP_001310292.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149904503|gb|ABR35336.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 635

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +   +   S  +     L + GIR E+     K  G +++ A     P  I
Sbjct: 534 WLSPVQVKILPISNKFNSYSEKIKDKLSSEGIRVEIDQKDEK-IGYKIREARNERVPYII 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           I G  E +   + ++  + G E +  +++        V   T+
Sbjct: 593 IVGEKEAAENNISLRSRSNGDEGTLNLEDLIERINNEVKNKTL 635



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R ++   G+  IETP++  +  L +         + +++ 
Sbjct: 261 GFPFMLPKGVILKNTLIDFWRKLHYEDGYVEIETPIM-LNKKLWETSGHWYHYRENMYTS 319

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +L+      
Sbjct: 320 SI-DEEEFALKPMNCPG 335


>gi|332286931|ref|YP_004418842.1| prolyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330430884|gb|AEC22218.1| prolyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 577

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/521 (9%), Positives = 127/521 (24%), Gaps = 95/521 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++  +I + +R   +  G   +  P+++ ++ L       ++    +  +
Sbjct: 38  GIYTYMPLGLKVLRKIENIVRQEMDQAGAIELLMPVVQPAE-LWVESGRWEQYGAELLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
           +D   +   L+    ++   +AR    ++  +       +                  F 
Sbjct: 97  KDRHQRDFVLQPTSEEVITDIARNEIHSWRQLPLNFYHIQTKFRDERRPRFGLMRGREFT 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND---------------------- 164
                  D   +SA+++   M        + +G+                          
Sbjct: 157 MKDAYSFDRDEASAQSSYDTMYDAYMRIFQRLGLTFRAVAADTGSIGGSRSHEFQVIADT 216

Query: 165 ------YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                 Y+        ++       +       E L      D       + V   LG+ 
Sbjct: 217 GEDLIVYNPNTQYAANIELAEAACLIPQRGAATETLNKTSTPDA---PKCEIVAQQLGKP 273

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
            +D         +   +    ++  L +  +  ++E+     G + G K        +E+
Sbjct: 274 LSDTVKSIVLATDNPDDPAVALIWLLLLRGDHELNEIK---TGKLEGLKNGYRFATEAEI 330

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV---------- 328
           +   G     +   +T+          V          N +       +           
Sbjct: 331 LDSFGCVPGYLGPINTVKPVTVIADHTVANMSNFVCGANAEGFHYTGVNWGRDLPEATVA 390

Query: 329 -----------------------------GGGGRY-----------DGLVSRFKGQNVPA 348
                                          G +Y           DG  +  +      
Sbjct: 391 DLRNVVAGDPDPQGGQLAIQRGIEVGHVFFLGDKYSKALNATFLETDGKPALLQMGCYGI 450

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIR 406
               I  + +                   ++I  M         +  +   Q L+  G+ 
Sbjct: 451 GISRIAAAAIEQCHDEKGIIWPKSIAPFELVICPMGWHKSETVRNTAEELYQSLKAQGVE 510

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
             +     +  G      +    PL I  G      G+++I
Sbjct: 511 VMLDDRDVR-PGIMFADWELIGVPLRITIGDRGLKEGIVEI 550


>gi|319441431|ref|ZP_07990587.1| prolyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 585

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 48/158 (30%), Gaps = 7/158 (4%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG- 376
           E       G          ++     ++VP  G        ++A+ + +   +       
Sbjct: 425 EIGHIFQLGRKYTEAFDVKILDENGKRSVPTMGSYGLGVSRLIAVLAEQMHDDKGLRWPT 484

Query: 377 -----PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D+ +          L  AG+            G + K A+    PL
Sbjct: 485 TVAPFDVHVVIANKDAAAGEAAGSLAGELDAAGLEVIFDERPKVGPGVKFKDAELLGMPL 544

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +I G    + G +++++   G+  +    +  +    
Sbjct: 545 VVIVG-RGFAEGTVELRNRLTGETTNIAYGDAVATIRE 581



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ + I   +R      G   I  P L   +   +           +  L
Sbjct: 40  GVYSWLPLGLRVLHNIEAIVRREMNAIGAQEIRLPALLPREPYERSN-RWTEYGDSLLRL 98

Query: 74  QDDDGQWISLRY 85
           +D  G    L  
Sbjct: 99  KDRKGADYLLGP 110


>gi|302379784|ref|ZP_07268268.1| proline--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312372|gb|EFK94369.1| proline--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 576

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 80/308 (25%), Gaps = 12/308 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         RI  ++ + +R   +NYG   I  P+ +  +   +        
Sbjct: 31  MIRKTAAGLYSYLPLGYRIVRKVENIVREEMDNYGSQEIHMPITQPREI-WEESGRWKTF 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              +F L+D + +   L         DL     +   +    I      YR     R   
Sbjct: 90  GPEMFKLKDRNNREFCLGPTAEEYFTDLVKGEIKSYKQLPLNIYQIQTKYRDEKRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
           +    F        D    +   A   M          +G+   +Y I   +   + G  
Sbjct: 150 NRSREFLMQDAYTFDVDEEAMGEAYMNMWRAYEVVFNRLGL---EYKIVAGDSGAMGGNS 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +   D     +      D         V   + +   +             + I+ 
Sbjct: 207 SHEFIALSDVGEGVICYSDDSDFAATDEKAYVYYQVNDENVEKLSSEKVLTP-NCKTIEE 265

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  FL++D    +  +  +V+G         +  +    +                   L
Sbjct: 266 VSDFLNVDAAHCLKAVDLMVEGKPVIVFIPGDRELNMSKLVSYLKCPEHEIEMMEEQDIL 325

Query: 300 EYYTGCVY 307
              +   +
Sbjct: 326 ALNSSPGF 333


>gi|260893515|ref|YP_003239612.1| threonyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865656|gb|ACX52762.1| threonyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 637

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 2/85 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  +   G+  I TP+L   +   +     D   + ++  
Sbjct: 261 GFPFFHPKGMIVRNELEALWRREHYRRGYQEIRTPILLKRELWERS-GHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAEN 98
            + DGQ  +++            + 
Sbjct: 319 LEIDGQPYAVKPMNCPGAILIYQQR 343



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 35/81 (43%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  +   ++L  A +R E+    ++    +++ A  +  P  +
Sbjct: 535 WLAPVQVRILPITDRHHAYARQIYELLSRADLRVELD-ARNEKVSYKVREAQVQKIPYML 593

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E + G + ++  ++G 
Sbjct: 594 VIGDKEMNSGTVAVRHRSRGD 614


>gi|145637732|ref|ZP_01793384.1| prolyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145269081|gb|EDK09032.1| prolyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 572

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLG 189



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRTGEKEMISKDKLLSVLNEK 568


>gi|315171869|gb|EFU15886.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1342]
          Length = 660

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|330935397|ref|XP_003304947.1| hypothetical protein PTT_17681 [Pyrenophora teres f. teres 0-1]
 gi|311318137|gb|EFQ86884.1| hypothetical protein PTT_17681 [Pyrenophora teres f. teres 0-1]
          Length = 562

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 14/114 (12%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
            +   +   K +     L  AG+R E       + G +    + +  PL I  G  +  +
Sbjct: 355 AEAKEELYGKVKKIADDLTEAGVRVETDYREGYSPGWKFNDWELKGIPLRIEFGPKDAEK 414

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           G++                +     +   A+ TI +  L + V K+L++ +E++
Sbjct: 415 GVVT--------------TSRRDIDDKDAARGTINVDNLANEVPKLLEQIQEDM 454


>gi|62320472|dbj|BAD94986.1| putative protein [Arabidopsis thaliana]
          Length = 426

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 20/112 (17%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    + L   +  ++ LR  G+RAE+  G        ++ A+ +  PL  
Sbjct: 325 WLSPVQVRVLPVTDNQLEFCKEVSKKLRACGVRAELCHGER--LPKLIRNAETQKIPLMA 382

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           + G  E   G + ++    G+                    TIP+ +L++ +
Sbjct: 383 VVGPKEVETGTVTVRSRFGGE------------------LGTIPVDDLINKI 416



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN I +S + ++  +G+D I TP +  +D L K     D   + ++  
Sbjct: 50  GLVFWHPKGAIVRNIIEESWKKMHVEHGYDLIYTPHVAKAD-LWKISGHLDFYRENMYDQ 108

Query: 74  QDDDGQWISLRYDLTA 89
            + + +   LR     
Sbjct: 109 MEIEDELYQLRPMNCP 124


>gi|116515338|ref|YP_816901.1| threonyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|161410743|ref|NP_359065.2| threonyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|73621971|sp|Q8DNX8|SYT_STRR6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122278253|sp|Q04JD7|SYT_STRP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116075914|gb|ABJ53634.1| threonyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 97/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +V   +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIV--NKELVSGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 619 GQKETQTVSVDNFVQAILADIA 640



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|15901467|ref|NP_346071.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657539|ref|ZP_01408280.1| hypothetical protein SpneT_02001261 [Streptococcus pneumoniae
           TIGR4]
 gi|149011514|ref|ZP_01832761.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|303253984|ref|ZP_07340104.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303258557|ref|ZP_07344537.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262647|ref|ZP_07348587.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263586|ref|ZP_07349508.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266970|ref|ZP_07352845.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269866|ref|ZP_07355610.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|22654131|sp|Q97PI4|SYT_STRPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14973120|gb|AAK75711.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147764504|gb|EDK71435.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|301802334|emb|CBW35088.1| threonyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302599072|gb|EFL66098.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636203|gb|EFL66698.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302640058|gb|EFL70513.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302640601|gb|EFL71004.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643487|gb|EFL73759.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646624|gb|EFL76849.1| threonyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 97/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +V   +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIV--NKELVSGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 619 GQKETQTVSVDNFVQAILADIA 640



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|317499591|ref|ZP_07957854.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893140|gb|EFV15359.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 641

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L         L+ AGIRA++    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVEVIPISDKHLDYANKVLDTLKAAGIRADID-TRAEKMGYKIREAQLQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     + ++   KG E   ++ +  +  +  +A   
Sbjct: 592 VVGGKEEENEAVSVRSRFKGDEGQMKLDDFLAAIKEEIANRE 633



 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +LD  R I++  G+  I TP++  S  L +     D   + +++ 
Sbjct: 260 GFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPIM-LSRHLWETSGHWDHYKENMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q  +++      
Sbjct: 319 VI-DDQDFAIKPMNCPG 334


>gi|145634860|ref|ZP_01790568.1| prolyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268026|gb|EDK08022.1| prolyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 572

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLG 189



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRSGEKEMISKDKLLSVLNEK 568


>gi|161621298|ref|YP_585241.2| prolyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|114152237|sp|Q1LIQ4|SYP_RALME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 573

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 49/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++ + +R      G   +  P+++ ++ L +     D+ 
Sbjct: 31  MIKKLGAGIYNYMPVGLRVIRKVENIVREEMNRAGAVELSMPVIQPAE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  L+D   +  +++    ++   +AR    ++  +       +             
Sbjct: 90  GPELLRLKDRHERDFAVQPTSEEVVTDIARTEIRSYKQLPVNFYQIQTKFRDERRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D      + +   M        +  G
Sbjct: 150 MRGREFTMKDAYSFDRDIDGLKASYQNMYDAYVRIFQRFG 189



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/86 (10%), Positives = 23/86 (26%), Gaps = 3/86 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  + +D      ++       L  AG+   +     +  G  
Sbjct: 462 DERGIIWPAAIAPFAVVVCPVGYDRNEAVKAEADRIHAELLAAGVDVILD-DRGERPGVM 520

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQ 446
               +    P  ++ G      G ++
Sbjct: 521 FADWELIGVPHRVVVGDRGLKEGKVE 546


>gi|302876555|ref|YP_003845188.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307687227|ref|ZP_07629673.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579412|gb|ADL53424.1| prolyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 566

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 77/254 (30%), Gaps = 10/254 (3%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R ++  G  +     ++   ++ D IR+  +  G        L  ++ L K  
Sbjct: 26  MLRAGLMR-KMASGVYNYMPMGLKALKKVEDIIRDEMDKAGAQEFLASALIPAE-LWKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D     +F L+D + +   L     ++   +AR   +++  +       +       
Sbjct: 84  GRWDTMGPEMFRLKDRNDRDFCLGPTHEEVFTDIARNEIKSYKQLPITLYQIQ-TKYRDE 142

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI--L 175
            +   G  R       D      ++   ++              R D            +
Sbjct: 143 RRPRFGVMRSREFVMKDAYSFDKDSEGLDISYNAMYEAYKNIFFRCDIECKAAEADSGAM 202

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
            G      +   +   + ++   A D             + +     + +     N  ++
Sbjct: 203 GGSGSAEFMVKSEVGEDDIVFCSACDYAANIEKSPATAEVMKKEELKNLEKIHTPN--AK 260

Query: 236 QIDIMVSFLSIDLE 249
            I+ +VSF  +D +
Sbjct: 261 TIEELVSFFKVDSK 274



 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 2/82 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +     +++  +  D   + K +     L+  G+   +   + +  G + K AD 
Sbjct: 461 IWPLEVAPYQVIVVPAVFKDEVQMKKAEELYDALKAIGVDVILDDRNERA-GIKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIK 448
              P+ I  G    + G ++ K
Sbjct: 520 LGIPMRITVGKK-IAEGEVEFK 540


>gi|145632080|ref|ZP_01787815.1| frataxin-like protein [Haemophilus influenzae 3655]
 gi|144986987|gb|EDJ93517.1| frataxin-like protein [Haemophilus influenzae 3655]
          Length = 572

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLG 189



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGIPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRTGEKEMISKDKLLSVLNEK 568


>gi|159904883|ref|YP_001548545.1| threonyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|238686928|sp|A9A6L7|SYT_METM6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|159886376|gb|ABX01313.1| threonyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 622

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 47/157 (29%), Gaps = 20/157 (12%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKS------LESSTNNIKEMGPVLITTMDHDSD 388
                +     +  +        L   L++                + PV    +     
Sbjct: 455 HDGDKKVHPIILHCSPTGSVERVLCGLLENAYLNTLENRPPALPTWLTPVQARVIPVGDK 514

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             +        LR +GIRA+       + G +++ A        ++ G  E   G L + 
Sbjct: 515 HSAFALDVATKLRASGIRADFDDRED-SMGKKVRNAGTDWVNYVVVIGDSEMESGKLTV- 572

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                      ++     ++A+  ++T+   EL+  +
Sbjct: 573 ----------TVREESELKKAKKEELTV--EELIEKI 597


>gi|322807448|emb|CBZ05022.1| threonyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 635

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 76/259 (29%), Gaps = 9/259 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  +     +  E + I+                EL            +  + +  +R
Sbjct: 381 DDAHLYMTKEQIKEEIVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLR 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           +     + I     +  G   + G   +  L   +    Q   +        R+D     
Sbjct: 441 E---ALDSIGKEYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIG 497

Query: 341 FKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
             G+              + R I  L    +       + PV +  M+         +  
Sbjct: 498 ADGEKHRPVMVHRTIYGSVERFIGILIEQYAGAFP-TWLAPVQVKLMNITDSQYDYLKKV 556

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + L+   IR E+    ++  G +++ A  +  P  +I G  E   G + ++    G   
Sbjct: 557 EEALKENNIRVEID-TRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLG 615

Query: 457 SREIKNNESWREARVAQIT 475
           +  ++      +  +   T
Sbjct: 616 AISLEEFIEKIKNEIKNKT 634



 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + +  R  +   G+  I TPL+   + L       D   + ++  
Sbjct: 261 GFPFFHPKGMIIRNILENFWREEHTKAGYQEIRTPLILNEE-LWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 319 TNIDDSDYAIKPMNCPG 335


>gi|293569265|ref|ZP_06680563.1| threonyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291587971|gb|EFF19821.1| threonyl-tRNA synthetase [Enterococcus faecium E1071]
          Length = 646

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/443 (10%), Positives = 114/443 (25%), Gaps = 81/443 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D   + +F 
Sbjct: 260 SGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELY-KTSGHWDHYQEDMFP 318

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 319 PMDMGDGEMLVLRPMNCP-------HHMMVYKNTIHSYRELPIRIAEL------------ 359

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 360 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 415

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 416 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 465

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 466 FYGPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 525

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 526 RFVAYLTEVYKGAFPTWLA---------------------------------------PI 546

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +      +  + +     + LR      E+    ++  G +++ +  +  P 
Sbjct: 547 QATIIPVSVDAHGDYAYEIKERLQM-KGLR-----VEVD-DRNEKMGYKIRASQTQKIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGK 454
            ++ G  E     + ++     +
Sbjct: 600 QLVVGDKELEDATVNVRRYGSKE 622


>gi|225387532|ref|ZP_03757296.1| hypothetical protein CLOSTASPAR_01285 [Clostridium asparagiforme
           DSM 15981]
 gi|225046368|gb|EEG56614.1| hypothetical protein CLOSTASPAR_01285 [Clostridium asparagiforme
           DSM 15981]
          Length = 584

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 7/128 (5%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++           + PV +  +     S+       + L+ AGIR
Sbjct: 458 HRVCFGSIERFIGILIEHFAGKFPVW--LAPVQVKVIPVSEKSMDYATGVYEKLKAAGIR 515

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK----ELSREIKN 462
            E+     K  G +++ A     P  ++ G  E + G + ++   KG     +L   I +
Sbjct: 516 TELDHKDEK-VGYKIRQAQLEKVPFMLVLGEKEAAEGAITVRSRDKGDLGAAQLEAFIGD 574

Query: 463 NESWREAR 470
            +   E +
Sbjct: 575 VKRMIETK 582



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R I+   G+  + TP++  S  L +     D     +++ 
Sbjct: 210 GFPFFLPKGMTLKNTLIDYWREIHLREGYQEVSTPII-LSRKLWENSGHWDHYKDNMYTT 268

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 269 VI-DEEDFAVKPMNCPG 284


>gi|149244270|ref|XP_001526678.1| threonyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146449072|gb|EDK43328.1| threonyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 486

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/472 (10%), Positives = 115/472 (24%), Gaps = 77/472 (16%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ--D 75
                 RI N+++  ++N    YGF  + TPL+ +   L K     D     +F +   D
Sbjct: 63  FLPHGTRILNKLIQFMKNQQIKYGFHEVVTPLI-FKTKLWKKSGHWDNYKDDMFKVVGND 121

Query: 76  DDGQW--ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              +   + L    T                            ++ +       F +   
Sbjct: 122 KSKEEVVVVLAP--TVQ---------------------SESLTDDGNDSALQEAFEEEHE 158

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI--GINNRKILDGILEKIGLHGDDKLN 191
             +          +      +   + I+ +D+           L G+      H DD   
Sbjct: 159 YGLKPMNCPGHCMIFSKFERSYNELPIRYSDFSSLHRNEASGALSGLTRVRRFHQDD--G 216

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
                +  ID+     L  +K                        ID +  +LS   E+ 
Sbjct: 217 HIFCDMSHIDQEIANTLNLIKDTYSIFG-----------------IDKIEYYLSTRPEEK 259

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                E         K   +        +    +         ++    +        I 
Sbjct: 260 YIGEIETWDAAELKLKQVLDRSAGKGNWQVREGDGAFYGPKIDVLLTDAFGKKHQVATIQ 319

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               + ++         G            +   +    F        + L   +     
Sbjct: 320 LDFQLPKRFDLKYISEDGSRNN--------QPILIHRAVFGSLERFFAILLDHYQGKWPF 371

Query: 372 IKEMGPVLITTMDHDSDSLSKYQM------YTQM------LRTAGIRAEMFLGSSKNFGN 419
                  +I  ++    + ++                   L       ++        G 
Sbjct: 372 WINPRQAIIIPVNETHTARAEELQRKLCGDIINTNDPVSPLTGYNFHVDVD-KRPATIGM 430

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLA-------KGKELSREIKNNE 464
           + K A ++     II G  + + G   ++           G+++ ++  + E
Sbjct: 431 RTKDAIQKGYSYLIIIGDKDIANGTYAVRSRDDRTIYNLTGEDIYKKFIDLE 482


>gi|261208968|ref|ZP_05923373.1| threonyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565220|ref|ZP_06445672.1| threonyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|294615018|ref|ZP_06694907.1| threonyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|260077007|gb|EEW64729.1| threonyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289163041|gb|EFD10889.1| threonyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291592149|gb|EFF23769.1| threonyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/443 (10%), Positives = 114/443 (25%), Gaps = 81/443 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D   + +F 
Sbjct: 260 SGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELY-KTSGHWDHYQEDMFP 318

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 319 PMDMGDGEMLVLRPMNCP-------HHMMVYKNTIHSYRELPIRIAEL------------ 359

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 360 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 415

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 416 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 465

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 466 FYGPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 525

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 526 RFVAYLTEVYKGAFPTWLA---------------------------------------PI 546

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +      +  + +     + LR      E+    ++  G +++ +  +  P 
Sbjct: 547 QATIIPVSVDAHGDYAYEIKERLQM-KGLR-----VEVD-DRNEKMGYKIRASQTQKIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGK 454
            ++ G  E     + ++     +
Sbjct: 600 QLVVGDKELEDATVNVRRYGSKE 622


>gi|148994898|ref|ZP_01823919.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|148997679|ref|ZP_01825243.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149006698|ref|ZP_01830384.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|149021279|ref|ZP_01835525.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168483499|ref|ZP_02708451.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168487280|ref|ZP_02711788.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|168488656|ref|ZP_02712855.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|168491490|ref|ZP_02715633.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168575182|ref|ZP_02721145.1| threonyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|169834472|ref|YP_001695022.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225859387|ref|YP_002740897.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225861459|ref|YP_002742968.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229236|ref|ZP_06962917.1| threonyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254509|ref|ZP_06978095.1| threonyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|307068259|ref|YP_003877225.1| threonyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|307127841|ref|YP_003879872.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|238688351|sp|B1I703|SYT_STRPI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783538|sp|C1C8M1|SYT_STRP7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783543|sp|C1CSP6|SYT_STRZT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|147756178|gb|EDK63220.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147761613|gb|EDK68577.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147926966|gb|EDK78011.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147930380|gb|EDK81364.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168996974|gb|ACA37586.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|172043101|gb|EDT51147.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183569836|gb|EDT90364.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183572780|gb|EDT93308.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183574162|gb|EDT94690.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183578687|gb|EDT99215.1| threonyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225720074|gb|ACO15928.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225727271|gb|ACO23122.1| threonyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|306409796|gb|ADM85223.1| Threonyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|306484903|gb|ADM91772.1| threonyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|327389816|gb|EGE88161.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332072464|gb|EGI82947.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
 gi|332072798|gb|EGI83279.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
 gi|332073965|gb|EGI84443.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332199661|gb|EGJ13736.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332200192|gb|EGJ14265.1| threonyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 96/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIV--NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 619 GQKETQTVSVDNFVQAILADIA 640



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|256848462|ref|ZP_05553904.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714729|gb|EEU29708.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 601

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/241 (11%), Positives = 74/241 (30%), Gaps = 5/241 (2%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D + + +     ++     +K +    +  +         + + +    
Sbjct: 356 KILKLIMSVYKDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKQAMDDLSLDYYE 415

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----YDGLVSRFKGQNVPATGF 351
             G   + G   +      + N++    +        R    Y G   +     +   G 
Sbjct: 416 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGKDGQEHMPVMIHRGV 475

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R +  L  +             +      D             LR A IR  +  
Sbjct: 476 VGTMERFVAYLTEIYKGAFPTWLAPEQVHIIPVSDDKHGDYADQLGAELRAAKIRVNVDH 535

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A  +  P  ++ G  E + G + ++   + ++ S   ++      A +
Sbjct: 536 -RNEKMGYKIREAQTQKVPYTLVVGDDEMANGSVSVRKYGEKEQNSMSKQDFMDELLADI 594

Query: 472 A 472
           A
Sbjct: 595 A 595



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  R + +  G++ + TP+L   D+  K     +     +F
Sbjct: 217 GLPYWLPKGAAIRRTIERYIIDREVAD--GYEHVYTPVLMNLDAY-KTSGHWEHYRDDMF 273

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 274 PPMDMGDGEMLELRPMNCPSHIQVYKHHLRSYRDLPLRIAELGMMHRYEKSGALSGLQRV 333

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                 +  A++  ++    +   I    + + + + K +        
Sbjct: 334 REMTLNDGHTFVALDQIRSEFAKILKLIMSVYKDFDITDYSFRLSLRDPKNVKKYYANDE 393

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 394 MWEKSQSM 401


>gi|227519418|ref|ZP_03949467.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|307280591|ref|ZP_07561639.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|227073125|gb|EEI11088.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|306503957|gb|EFM73174.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|315145737|gb|EFT89753.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315151718|gb|EFT95734.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315173904|gb|EFU17921.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 660

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|166032032|ref|ZP_02234861.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC
           27755]
 gi|166028485|gb|EDR47242.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC
           27755]
          Length = 643

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 5/111 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      +         L  AG+RAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVKVLPISDKYMDYANKVLDELNAAGVRAEVD-SRAEKIGYKIREAQMQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKE----LSREIKNNESWREARVAQITIPISE 480
           + G  E+   ++ ++    G E    L   I + +     RV +  +   E
Sbjct: 592 VVGEKEQEADLVSVRSRFAGDEGQKNLETFIADIQKEIADRVKREVVKEDE 642



 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +LD  R +++  G+  + TP++  S  L +     D   + +++ 
Sbjct: 260 GFPFFLPKGMVLKNTLLDYWRELHKKAGYVEVSTPII-LSRHLWETSGHWDHYKENMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
           Q  DG+  +++      
Sbjct: 319 QI-DGEDYAIKPMNCPG 334


>gi|332798664|ref|YP_004460163.1| threonyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332696399|gb|AEE90856.1| threonyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 636

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 1/90 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +       + L  AGIR E+    ++  G +++ A  +  P  +
Sbjct: 536 WLAPVQARVLPISEKHMDYAYKVKKQLEEAGIRVEVD-ERNEKIGYKVRDAQMKKIPYML 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           I G  E +   + ++   KG    + I+  
Sbjct: 595 IVGDKEANENTVSVRTREKGDVGQKPIETF 624



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + I N + D  R  +   G+  I+TP++   + L +     D   + ++  
Sbjct: 263 GFPFFHPKGMIIWNLLTDFWRKEHSKRGYQEIKTPIILNEE-LWRRSGHWDHYKENMY-F 320

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 321 TKIDDMNYAVKPMNCPG 337


>gi|225855059|ref|YP_002736571.1| threonyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|237649181|ref|ZP_04523433.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822258|ref|ZP_04598103.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|254783541|sp|C1CFK0|SYT_STRZJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225723844|gb|ACO19697.1| threonyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 96/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIV--NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 619 GQKETQTVSVDNFVQAILADIA 640



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|22325483|ref|NP_671778.1| EMB2761 (EMBRYO DEFECTIVE 2761); ATP binding / aminoacyl-tRNA
           ligase/ ligase, forming aminoacyl-tRNA and related
           compounds / nucleotide binding / threonine-tRNA ligase
           [Arabidopsis thaliana]
 gi|330250779|gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA
           ligase [Arabidopsis thaliana]
          Length = 650

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 20/112 (17%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    + L   +  ++ LR  G+RAE+  G        ++ A+ +  PL  
Sbjct: 549 WLSPVQVRVLPVTDNQLEFCKEVSKKLRACGVRAELCHGER--LPKLIRNAETQKIPLMA 606

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           + G  E   G + ++    G+                    TIP+ +L++ +
Sbjct: 607 VVGPKEVETGTVTVRSRFGGE------------------LGTIPVDDLINKI 640



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN I +S + ++  +G+D I TP +  +D L K     D   + ++  
Sbjct: 274 GLVFWHPKGAIVRNIIEESWKKMHVEHGYDLIYTPHVAKAD-LWKISGHLDFYRENMYDQ 332

Query: 74  QDDDGQWISLRYDLTA 89
            + + +   LR     
Sbjct: 333 MEIEDELYQLRPMNCP 348


>gi|326386620|ref|ZP_08208242.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208935|gb|EGD59730.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 663

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 55/473 (11%), Positives = 126/473 (26%), Gaps = 87/473 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RI   +   +R   +  G+  ++TP +  +    +      +  + +F +
Sbjct: 269 GSVFWHPKGYRIWRELEAYMRRAIDGAGYREVKTPQVMDARQ-WEASGHWGKYRENMFVI 327

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D+                                    P   +E         ++    
Sbjct: 328 PDE-----------------------------------VPNVEDEGPLVSDDAAWMA--- 349

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +      A   +      +   + ++   Y  G  +R    G L  +      +  + 
Sbjct: 350 --LKPMNCPAHVLIFRQGIKSYRELPLRF--YENGCCHRNEPHGALHGLMRV--RQFTQD 403

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +      ++    L      D    +     L  E+     S    D  ++  
Sbjct: 404 DAHIFCREDQIVEEVRAFCELADRIYKDFGFTYAIKLALRPEK--RFGSDEMWDQAEAEL 461

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                  G    E G+ EL                  ++  I R  +  T      +   
Sbjct: 462 RNAVAAAGLATPEYGWEELPGEG----AFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPER 517

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
              +   +                  R +   +    F      + + ++          
Sbjct: 518 LDASYIGEDG---------------ERHRPVMLHRAIFGSYERFIGILIEHFAGKLPVWL 562

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                ++ T+  D+D     Q   Q L  AGIR E     ++    +++    +  P  +
Sbjct: 563 APVQAVVATIVSDAD--GYAQETVQTLAAAGIRVE-ADTRNEKINYKVREHSLQKVPFLL 619

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           + G  E   G + ++ L  G++                 Q  +P++E ++ +K
Sbjct: 620 VVGKREAEEGTVAVRRL--GEQ----------------QQKVLPLAEAIALIK 654


>gi|299537247|ref|ZP_07050550.1| threonyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727488|gb|EFI68060.1| threonyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 638

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/391 (10%), Positives = 110/391 (28%), Gaps = 25/391 (6%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           +   N   +     +Y      + +           Q   +  G      D      + D
Sbjct: 266 FYLANGQILRNELESYLRHLQAKYDYGEVRTPLMMNQRLWEQSGHWDHYKDNMYFTQVDD 325

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
              A+       H+          I +       D         +         L G+  
Sbjct: 326 QSFALKPMNCPGHML---------IFKNALHSYRDLPIRMAEFGQVHRHEFSGALNGLLR 376

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
           +      D++  F     +  E     ++   ID   ++      ++ +   +    +L 
Sbjct: 377 VRT-FCQDDAHIFATPQQIEDEIA---LALKIIDEVYNVFGFAYTIELSTRPDDYMGDLA 432

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
           +  +         N + I+ TI  G   + G   +  +   +    Q   V        +
Sbjct: 433 LWDQAEAALENVLNNLGIAYTINAGDGAFYGPKIDIHIKDAIQRSHQCATVQLDFQLPEK 492

Query: 334 YDGLVSRFKGQN-----VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
           +D        +      +    F      L + ++    +         V +  +     
Sbjct: 493 FDLTYINEHNERVRPVVIHRAVFGSIDRFLGILIEHFGGAFPTWLAPQQVQV--IGVAEA 550

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                +   + L+ A IR ++     +  G +++ A  +  P  ++ G  E +   + ++
Sbjct: 551 HQGYAKQVVEALQQAEIRVQLD-DRQEKLGKKIREAQLQKIPYIVVIGDREVANQTVAVR 609

Query: 449 DLAKGKELS--REIKNNESWREARVAQITIP 477
               G++ +  + ++       A + Q ++ 
Sbjct: 610 --RHGQQNANDKSLQQLIEEVTAAIQQKSLA 638


>gi|260583498|ref|ZP_05851246.1| threonine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158124|gb|EEW93192.1| threonine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/468 (8%), Positives = 115/468 (24%), Gaps = 79/468 (16%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++                      
Sbjct: 259 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPVMADVGLYKTSG------------ 306

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                     + + +            +
Sbjct: 307 -----------------------------------------HWAHYQEDMFPPMDMGDGE 325

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  +          +      +   + I+  +            G++ +    G     +
Sbjct: 326 LLVLRPMNCPHHMMVYKNHIHSYRELPIRIAEL-----------GMMHRYEKSGALSGLQ 374

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+  +   D         +K    +   D   +  K  N+  +    +      D  K  
Sbjct: 375 RVREMTLNDGHTFVRPDQIKDEF-KRILDLIREVYKDFNV-KDYRFRLSYRDPEDKHKYF 432

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    E     G  +          +        +    L 
Sbjct: 433 DDDEMWNKAEAMLKEAMDEM--GLEYFEAIGEAAFYGPKLDIQFKTAMGLEETMSTIQLD 490

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +        V          +   +  +   +     S     +   ++  + +    
Sbjct: 491 FLLPERFDLTYVG---------EDGDNTHRPVVIHRGVVSTAERFVAYLIEEYKGAFPTW 541

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  I  +  +       +   + + + G+R E+    ++  G +++ +  +  P  
Sbjct: 542 LAPVQATIIPVSVEH-HYDAARALKEKMMSLGLRVELD-DRNEKMGYKIRASQTQKIPYQ 599

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++     + +S  I       +  +A  + P+ +
Sbjct: 600 LVIGDKEVEEGTVTVRRYGSKETVSMTIGAYLERVQREIANFSRPLED 647


>gi|326201674|ref|ZP_08191545.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988274|gb|EGD49099.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 635

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + D  R+ ++  G+  I+TP++   +   +     D   + ++++
Sbjct: 261 GFPFFMPKGMVLRNLLEDFWRSEHKKAGYQEIKTPVILNKELWLRS-GHWDTYKENMYTV 319

Query: 74  QDDDGQWISLRYDLTAP 90
            D D Q  +++      
Sbjct: 320 -DIDEQEYAIKPMNCPG 335



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 38/123 (30%), Gaps = 1/123 (0%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     +A+ +   +      + PV +  +              ++L    +R E+
Sbjct: 510 RVVFGSIERFIAILTEHFAGAFPAWLSPVQVKILPLVDKHHDYAFEVKKLLEAENVRVEV 569

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               ++  G +++ A     P  ++ G  E    ++ ++    G   +   +        
Sbjct: 570 D-SRNEKIGYKIREAQMDKTPYMLVIGDKELEGRLVSVRSRRDGDLGAISPEQFAEKILD 628

Query: 470 RVA 472
            + 
Sbjct: 629 EIK 631


>gi|254468329|ref|ZP_05081735.1| prolyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087139|gb|EDZ64422.1| prolyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 561

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/527 (8%), Positives = 129/527 (24%), Gaps = 70/527 (13%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +R+  +I   IR      G   +  P ++ ++ L +      +    +  
Sbjct: 37  SGLYTWMPIGLRVLRKIESIIREEMNASGAVELLMPAIQPAE-LWQETGRWQQFGPQMLK 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRF 125
           + D             ++   +AR    ++  +          +R     R        F
Sbjct: 96  INDRHQNEFCFGPTHEEVITDIARKELNSYKQLPINFYQIQTKFRDEIRPRFGVMRAREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK------------------------ 161
                       +  +     M          +G++                        
Sbjct: 156 LMKDAYSFHANENCLQKMYELMFETYNRIFSRIGLQFRSVAADSGAIGGDASHEFHVLAD 215

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
             +  I  +++      +EK          E  +    +   +   ++ ++         
Sbjct: 216 SGEDVIAYSDQSEYAANIEKASTVFKKASKENKVPTEKVHTPEITTIEALQEFFKIDTKS 275

Query: 222 NSGDFTKGAN-------------LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
                    +             +   +++ ++      + K        +     G +G
Sbjct: 276 ILKAVVFNHDDELVICFVPGNREINLVKLEKVIGSNRFRVAKDDELKKHGLIPGFIGPEG 335

Query: 269 FNELVVISEL--VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
              +  + +   +          +            T    +            +     
Sbjct: 336 NEHIRKLFDHSIIEMENMVCGANEEHYHFTNFQSINTEKFVDITNVVEGDVSPDESGKLK 395

Query: 327 SVGG---------GGRYDGLVSRFKGQN------VPATGFSIGISRLIVALKSLESSTNN 371
              G         G +Y   +             +    + IG+SR++ A     +  N 
Sbjct: 396 FCRGIEVGHIFQLGKKYSESMQASILNEEGKSQTMTMGCYGIGVSRIVAAAIEQNNDENG 455

Query: 372 I---KEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           +   K + P  +  +           ++       L  +GI   +    ++  G     +
Sbjct: 456 MILPKSIAPFELIIVPIGYHKNDKVRAQANKIYADLLKSGIDVILDDRVAR-PGIMFAES 514

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           D    P  ++ G    +   ++ K  ++       I +   + ++++
Sbjct: 515 DLIGIPNRLVIGEKSLNENKVEFKSRSESNSEMINISDLIHFIKSKI 561


>gi|322411327|gb|EFY02235.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/378 (11%), Positives = 106/378 (28%), Gaps = 16/378 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +      +  Q D+  V    +  +  +  M       V 
Sbjct: 282 KELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVY 341

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++    +  
Sbjct: 342 KNHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIRDEF-KRT 400

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                D  +  NLT  +    +S+   +     ++  E+ +   A  KG  +  +  +  
Sbjct: 401 LQLIIDVYEDFNLTDYRF--RLSYRDPEDTHKYYDNDEMWENAQAMLKGAMD-DMGVDYF 457

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 458 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 506

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 507 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEIAKT 566

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+RA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 567 LRDRGVRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTES 625

Query: 460 IKNNESWREARVAQITIP 477
           +++      A +A+ + P
Sbjct: 626 VEDFVENILADIARKSRP 643



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 83/330 (25%), Gaps = 39/330 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     +   + +F +
Sbjct: 260 GLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPV 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N  H        I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVHSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    I      I    ++ L  I   I ++ D  L +
Sbjct: 359 GMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIRDEFKRTLQLI---IDVYEDFNLTD 415

Query: 193 RLIVLRAIDKLDKF-------GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               L   D  D           +  + +L     D   D+ +     +     +   + 
Sbjct: 416 YRFRLSYRDPEDTHKYYDNDEMWENAQAMLKGAMDDMGVDYFEAEGEAAFYGPKLDIQV- 474

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               K+     E +                 + +   G     + I   ++  +E +T  
Sbjct: 475 ----KTALGNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAI 528

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
           + E   G          V    +      D
Sbjct: 529 LIETYKGAFPTWLAPHQVTVIPISNEAHID 558


>gi|302671729|ref|YP_003831689.1| threonyl-tRNA synthetase ThrZ [Butyrivibrio proteoclasticus B316]
 gi|302396202|gb|ADL35107.1| threonyl-tRNA synthetase ThrZ [Butyrivibrio proteoclasticus B316]
          Length = 634

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 64/494 (12%), Positives = 133/494 (26%), Gaps = 71/494 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E   G      +  ++   +L   R I E +G+  I  PL+                
Sbjct: 202 MFDETAPGMPYWLPRGWKMYQALLKYSREIQERHGYTEIAAPLVNNKKLWL-ISGHWAHY 260

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F               +   +               +     P      + P    
Sbjct: 261 VNNMF---------------MVPGV-----------SGWLKADAEIPGILENNNDPTEEP 294

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + I+    +V  + E  D      M      +  KR ++       +      E   LH 
Sbjct: 295 KNIKIQAGSVIYNREQNDTMAAKPMNCPNAMMTYKRTNHSYKELPIR----YSEYDVLHR 350

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +K  +   + R                  E R D+   F   + +  E  D++     I
Sbjct: 351 KEKSGQMNGLFRVQ----------------EFRQDDDHTFVMESQIKEEIADVIAIADEI 394

Query: 247 DLEKSMHELYELV---KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                +    EL    +  +   + +N      + +    Y     +I+           
Sbjct: 395 YSTFGVTYRAELSTRPEDFMGDIEVWNRAEAALKEILDEKYGEGGYEINEGDGAFYGPKI 454

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-VPATGFSIGISRLIVAL 362
               +  LG        +         G  Y       +    +    +      + + +
Sbjct: 455 DLQIKDALGREWQCGTVQLDFQLPHNFGLTYQAQDGTMQMPVVIHRAIYGSLERFIGIII 514

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++ +           V I  +  + +     +   Q L  AGIR E     + N   ++K
Sbjct: 515 ENFKGVFPFWLSPYQVGIVPIRLEHN--EYAKEVEQALMNAGIRVEADYSDN-NMKEKIK 571

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
                  P  ++ G  E +   + I      K++                   +P+  LV
Sbjct: 572 KFKNYKDPYILVVGDKEAAERTVSINVRGSNKQV-----------------QNVPLDALV 614

Query: 483 STVKKILQENKEEI 496
           +  KK+ +E+  E+
Sbjct: 615 AMCKKMNEEHSLEL 628


>gi|315033108|gb|EFT45040.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0017]
          Length = 672

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 288 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 346

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 347 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 387

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 388 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 443

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 444 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 493

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 494 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 553

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 554 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 598

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 599 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 627

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 628 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 667


>gi|307272094|ref|ZP_07553357.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306511210|gb|EFM80217.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 660

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|290473678|ref|YP_003466550.1| proline tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289172983|emb|CBJ79754.1| proline tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 573

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MTRKLASGLYNWMPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D   +   L     ++   L R    ++  +          +R     R   
Sbjct: 90  GPELLRFEDRGARPFVLGPTHEEVITDLVRNEVTSYKQLPLNLFQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +    +M    +     +G
Sbjct: 150 MRSREFIMKDAYSFHTSQESLQETYDKMYDAYSKIFTRIG 189



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 32/113 (28%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V +  M+       K   +     LR  GI         +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVALLPMNMHKSYRVKEVAEKLYADLRANGIDVIFDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  ++ G      G ++ K    G +   +++    + + ++ Q
Sbjct: 520 FADMELIGVPHTLVIGDRNLDNGEVEYKYRRNGDKQMLKLEGIIEYLKEQIKQ 572


>gi|294779531|ref|ZP_06744926.1| threonine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300861074|ref|ZP_07107161.1| threonine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307268336|ref|ZP_07549717.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307276154|ref|ZP_07557285.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|294453410|gb|EFG21817.1| threonine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300850113|gb|EFK77863.1| threonine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306507148|gb|EFM76287.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306515362|gb|EFM83896.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315036305|gb|EFT48237.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0027]
          Length = 660

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|194397191|ref|YP_002038247.1| threonyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|238690846|sp|B5E6Q8|SYT_STRP4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194356858|gb|ACF55306.1| threonyl-tRNA synthetase (thrS) [Streptococcus pneumoniae G54]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 96/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIV--NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 619 GQKETQTVSVDNFVQAILADIA 640



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|327490276|gb|EGF22064.1| threonine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 647

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/384 (9%), Positives = 105/384 (27%), Gaps = 26/384 (6%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                                 ++   ++  +  D   + +     ++      K ++  
Sbjct: 397 EEF-------------------QRALQLIIDVYADFNLTEYRFRLSLRDPQDTHKYYDND 437

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +            + + +      G   + G   +  +   + NE+    +        
Sbjct: 438 EMWENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPE 497

Query: 333 RYDGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
           R+D       G+         G    + R    L                +      +  
Sbjct: 498 RFDLKYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEA 557

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +       + LR  G+RA++    ++    +++ +     P  +I G  E   G + ++
Sbjct: 558 HIDYAWQMAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDGTVNVR 616

Query: 449 DLAKGKELSREIKNNESWREARVA 472
              + +  +  +        A +A
Sbjct: 617 RYGQKETHTIPVDEFVEQILADIA 640



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/230 (10%), Positives = 57/230 (24%), Gaps = 10/230 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR             +         +YR  P+   E     R+ +     
Sbjct: 321 MDMGDGEEFVLRPMNCP-------HHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                    + +     +  + ++    +     I +     L     ++ L      ++
Sbjct: 374 -GLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYADFNLTEYRFRLSLRDPQDTHK 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                   +         +  +  +           G  L  +    + +
Sbjct: 433 YYDNDEMWENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLDIQVKTALGN 482


>gi|294792093|ref|ZP_06757241.1| threonine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457323|gb|EFG25685.1| threonine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 641

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++ ++ ++ I TP++  S  L +     D   + +++ 
Sbjct: 268 GFPFFLPKGMALRNELENFWREVHHDFDYEEIRTPII-LSKHLWETSGHWDHYRENMYTT 326

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              D +  +++          V +N            
Sbjct: 327 II-DDEEYAIKPMNCPGGI-LVYQNEMHSYRDFPLRY 361



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +      +   +   + +    +R E+    S+  G +++ A     P  +
Sbjct: 541 WMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVD-DRSEKIGYKIRQAQMAKVPYML 599

Query: 434 IQGTGERSRGMLQIK 448
           + G  E   G + ++
Sbjct: 600 VVGDKEVEEGTVNVR 614


>gi|269127985|ref|YP_003301355.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268312943|gb|ACY99317.1| prolyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 565

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+R++I++ IR   +  G   +  P L+ ++ L +     D   +  F L D  
Sbjct: 42  LLPPAARVRSKIIEVIRQEMDRIGAQEVLLPALQPAE-LWRRNGRWDASGEETFRLTDRK 100

Query: 78  GQWISLRYDLTA--PLARYVAENFDTIVFPCRTYRI 111
           G   +L    T    +   +A    +     + +  
Sbjct: 101 GAEAAL---GTTHEEVVASLATELGSYRRLPQLWYQ 133



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 19/125 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I      +      D    +  +     L  AG+   +     +  G +    + 
Sbjct: 460 RWPAGIAPFDVAVTLLDPRDDQVTAAAEQIYTALAAAGVETILDDRDER-PGAKFADTEL 518

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  +  G      G ++IK  A G                     T+PI E  + V 
Sbjct: 519 IGIPYRVTVGKRGLKSGTVEIKTRATG------------------RTDTVPIPEAAARVT 560

Query: 487 KILQE 491
            +L+ 
Sbjct: 561 ALLKS 565


>gi|126728431|ref|ZP_01744247.1| ATP phosphoribosyltransferase regulatory subunit [Sagittula
           stellata E-37]
 gi|126711396|gb|EBA10446.1| ATP phosphoribosyltransferase regulatory subunit [Sagittula
           stellata E-37]
          Length = 352

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 112/359 (31%), Gaps = 38/359 (10%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           +R+ +E  G  P++  +L+ ++ L     ++ R     F   D     + LR D T P+ 
Sbjct: 1   MRDRFEAAGAVPVDCAVLQPAEVLLDLYGEDVRTRA--FVTVDPVRGEVMLRPDFTVPV- 57

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS----------SAET 142
             V  +      P R    G VFR ++  P R  ++ Q   +               A  
Sbjct: 58  --VQMHMAEGAEPARYTYAGEVFRRQEDHPERAPEYFQVGYEVFDRADPAAADAEVFATF 115

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV------ 196
           A+A     +   +  +GI            +    ++  I      +             
Sbjct: 116 AEALAPYALRPVVGDIGILTAAVWGLNTTEQRRVALMRHIWRPRRFRALLDRYAGRVPVP 175

Query: 197 ------LRAIDKLDKFGLQ-GVKLLLGEGRTDN-SGDFTKGANLTSEQIDIMVSFL--SI 246
                 L A D +   G   G++                    L  EQ+ ++ + L  S 
Sbjct: 176 ASRTALLAADDPMAGAGPMIGLRSEEEIRERIEVLRADAAEPPLADEQVALIETLLKVSE 235

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D   ++  L ++     A     +      + +   G +   +   ++  R         
Sbjct: 236 DCPHALEHLRDIAVDMPAIGAAVDRFGARCDAMAARGVDVTHLSFEASYGR-------TS 288

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            E   GF       +   + +V  GGRYD L  +            +  + L+V L+ +
Sbjct: 289 MEYYDGFVFGFLCAQRPDWPAVATGGRYDALTRQLGQGREIPAVGGVIRTGLLVDLERM 347


>gi|303234780|ref|ZP_07321406.1| proline--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494121|gb|EFL53901.1| proline--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 576

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 80/308 (25%), Gaps = 12/308 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         RI  ++ + +R   +NYG   I  P+ +  +   +        
Sbjct: 31  MIRKTAAGLYSYLPLGYRIVRKVENIVREEMDNYGSQEIHMPVTQPREI-WEESGRWKTF 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              +F L+D + +   L         DL     +   +    I      YR     R   
Sbjct: 90  GPEMFKLKDRNNREFCLGPTAEEYFTDLVKGEIKSYKQLPLNIYQIQTKYRDEKRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
           +    F        D    +   A   M          +G+   +Y I   +   + G  
Sbjct: 150 NRSREFLMQDAYTFDVNEEAMGEAYMNMWRAYEVVFNRLGL---EYKIVAGDSGAMGGNS 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +   D     +      D         V   + +   +             + I+ 
Sbjct: 207 SHEFIALSDVGEGVICYSDDSDFAATDEKAYVYYQVNDENVEKLSSEKVLTP-NCKTIEE 265

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  FL++D    +  +  +V+G         +  +    +                   L
Sbjct: 266 VSDFLNVDAAHCLKAVDLMVEGKPVIVFIPGDRELNMSKLVSYLKCPEHEIEMMEEQDIL 325

Query: 300 EYYTGCVY 307
              +   +
Sbjct: 326 ALNSSPGF 333


>gi|289550561|ref|YP_003471465.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315658055|ref|ZP_07910928.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180093|gb|ADC87338.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315496945|gb|EFU85267.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 645

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 64/480 (13%), Positives = 125/480 (26%), Gaps = 96/480 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   +               
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-RTSGHWAHY------- 313

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                     R D+  P         D            P             + +   +
Sbjct: 314 ----------RDDMFPP------MKLDENEEMVLRPMNCPHHMMIYKNKPHSYRELPIRL 357

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +G+      +     +       G+  ND HI +   +I D     + +         
Sbjct: 358 AELGTMHRYEASGAVSGLQRV---RGMTLNDSHIFVRPDQIKDEFKRVVHM--------- 405

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  D    FG +     L     +                         D EK M 
Sbjct: 406 -----IQDVYKDFGFEDYTFRLSYRDPE-------------------------DKEKYMD 435

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +     K     ++  +EL      V   G  +         V+        +  A L F
Sbjct: 436 DDDMWNKAESMLKEAVDEL--GLPYVEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDF 493

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +            +G  G Y   V   +G       F   ++      +  + +     
Sbjct: 494 LLPE----RFELTYIGSDGEYHRPVVIHRGVVSTMERFVAFLT------EETKGAFPTWL 543

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V I  ++ D       +     L++ G+R E+    ++  G +++ A  +  P  I
Sbjct: 544 APKQVEIIPVNVD-LHYDYARNLQDELKSQGVRVEID-DRNEKMGYKIREAQMQKIPYQI 601

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E     + ++      + + E                     LV  ++  L++++
Sbjct: 602 VVGDKEVENNQVNVRQYGSQDQQTLERDEFIW--------------NLVDEIR--LKKHR 645


>gi|269467800|gb|EEZ79555.1| prolyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 560

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 43/160 (26%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L ++L  G        +R+  ++   IR      G   +  P+ + ++ L +     ++ 
Sbjct: 31  LISKLASGLYSYLPMGLRVLKKVEAIIREEMNKSGAQEVLMPVAQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY--D-----LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              +    D   +   L    +     L A   R   +           +R     R   
Sbjct: 90  GPELLRFNDRHNRKFCLGPTHEEVITHLAAQYIRSYKQLPMNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F            +S +     M     +    +G
Sbjct: 150 MRSREFIMKDAYSFHLDQNSLQQTFDVMHQTYCNIFNRLG 189


>gi|296422769|ref|XP_002840931.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637158|emb|CAZ85122.1| unnamed protein product [Tuber melanosporum]
          Length = 459

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 6/112 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI N+++  IR+ Y  YG++ + TP + Y  SL +     +  N+ +F +
Sbjct: 75  GSPLFLPHGSRIFNKLISFIRSQYTLYGYEEVITPTI-YKKSLWETSGHWENYNEHMFKV 133

Query: 74  QDDDGQWISLRYDLTAPLA---RYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +   G+   L+           ++ A        P R     P+ RNE  G 
Sbjct: 134 E--AGEEFGLKPMNCPGHCLLFKHAAGKLSLRDLPVRYADFSPLHRNENSGS 183


>gi|167766936|ref|ZP_02438989.1| hypothetical protein CLOSS21_01453 [Clostridium sp. SS2/1]
 gi|167710911|gb|EDS21490.1| hypothetical protein CLOSS21_01453 [Clostridium sp. SS2/1]
          Length = 645

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L         L+ AGIRA++    ++  G +++ A  +  P  +
Sbjct: 537 WLAPVQVEVIPISDKHLDYANKVLDTLKAAGIRADID-TRAEKMGYKIREAQLQKIPYML 595

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     + ++   KG E   ++ +     +  +A   
Sbjct: 596 VVGGKEEENEAVSVRSRFKGDEGQMKLDDFLDAIKEEIANRE 637



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +LD  R I++  G+  I TP++  S  L +     D   + +++ 
Sbjct: 264 GFPFFLPKGMVLKNTLLDYWREIHQKAGYVEISTPIM-LSRHLWETSGHWDHYKENMYTT 322

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q  +++      
Sbjct: 323 VI-DDQDFAIKPMNCPG 338


>gi|92117720|ref|YP_577449.1| prolyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|123083656|sp|Q1QLA8|SYP_NITHX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91800614|gb|ABE62989.1| prolyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 439

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/465 (11%), Positives = 113/465 (24%), Gaps = 80/465 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  +I   +R      G   +  P L+ +D   +               
Sbjct: 38  GIYAWLPLGLRVLKKIEAIVREEQNRAGAIELLMPTLQLADLWRESG------------- 84

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                     RYD                           + R +             + 
Sbjct: 85  ----------RYD----------------------AYGPEMLRIQDRHKRELLYGPTNEE 112

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                      +   + +         +          R     + +      D+     
Sbjct: 113 MITEIFRSYVRSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDIDEVGARL 172

Query: 194 LIVLRAIDKLDKFGLQ-----GVKLLLGEGRTDNSGDFTKGAN-------LTSEQIDIMV 241
                 +  L  F         ++   G    D S +F   A        +  + +D+ V
Sbjct: 173 SYNRMFVAYLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDKDVLDLPV 232

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
               +D +  +  + +      A  +         ++   + Y     +      RG+E 
Sbjct: 233 PGTDVDYDGDLTPIVKQWTTAYAATE---------DVHDGARYEREVPEERRVHTRGIEV 283

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                +       +      P        GG Y   VSR  G  + A             
Sbjct: 284 GQIFYFGTKYSESMKALVAGPDGVEQPIHGGSYGVGVSRLVGAIIEACH----------- 332

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDS-DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                           V I  +   + D+ +  +   + L   G+   ++  + +  G +
Sbjct: 333 -DDAGIKWPEAVAPFTVAILNLKQGAGDTDAACERLYRELSAKGVDV-LYDDTDQRAGAK 390

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              AD    P  ++ G    + G ++IK    G   +  +++   
Sbjct: 391 FATADLIGIPWQVMVGPKGLAEGKVEIKRRGDGTRENVALEDAVE 435


>gi|332670041|ref|YP_004453049.1| prolyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339079|gb|AEE45662.1| prolyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 597

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 35/111 (31%), Gaps = 1/111 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D+      +     L   G+          + G +  
Sbjct: 484 DDRGLAWPAHVAPAHVHVVATGKDASVFEAAEDVAAQLVARGVEVLYDDRPKVSPGVKFA 543

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            A+    PL ++ G    + G+++++    G+ +   + +       RVA+
Sbjct: 544 DAELFGVPLVVVVG-RGLAEGLVEVRPRVGGEPVQVPVADVVEHVAGRVAE 593



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 20/72 (27%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++   +R      G   +  P L   +               +F L
Sbjct: 40  GIYTWLPLGLRVLAKVEAVVREEMAAAGAQEVHFPALLPKEPYEA-TGRWTEYGPNIFRL 98

Query: 74  QDDDGQWISLRY 85
           +D  G    L  
Sbjct: 99  KDRKGGDYLLAP 110


>gi|327536012|gb|AEA94846.1| threonine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 660

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|319407251|emb|CBI80890.1| Prolyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 441

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/451 (11%), Positives = 118/451 (26%), Gaps = 61/451 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++ ++I   IR   E  G   I  P ++ +D L +     +  
Sbjct: 31  MVRQQTSGIYSWLPLGKKVLDKICKIIREEQERAGALEILMPTIQSAD-LWRESERYNDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GLEMLRIRDRQDRDLLYGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S      +         +  +             R  L  I     
Sbjct: 148 GVMRAREFLMKDAYSFDLDYASAKISYNRMFVAYLRTFS---------RIGLKAI----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      ++   G    + S +F   A      I      
Sbjct: 194 --------------------------PMRADTGPIGGELSHEFIILAKTGESSI------ 221

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                ++ +      V      +    ++V     +  +    +  +   + V      +
Sbjct: 222 --FCDKRFLEFTVPSVSIDFTDKDVLADIVRQWTSLYAATEEMHN-EEEWSKVPDSNKLS 278

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
               E    F    +   P+    +G     DG        +       +  + +  +  
Sbjct: 279 ARGIEVGHIFHFGTKYSAPMGAKVMGQ----DGKEHFVSMGSYGIGPSRLVAAVIESSHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                           I  M  D +  S   +   Q L   G    +   + +  G++  
Sbjct: 335 EHGIIWPKSIAPFDFGIINMKPDDEKCSYICETLYQELIRRGFDPLLD-DTGERPGSKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
             D    P+ +I G    ++  ++IKD   G
Sbjct: 394 TMDLIGLPVQMIIGPKNATQNEVEIKDRKTG 424


>gi|315148859|gb|EFT92875.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 660

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|304440717|ref|ZP_07400601.1| proline--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304370904|gb|EFM24526.1| proline--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 582

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R   +  G   I    ++ ++   +     D+    +F L
Sbjct: 38  GIYSYLPLGYRVVRKIEQIVREEMDRAGSQEILMSAIQPAEI-WEESGRWDKFGPEMFKL 96

Query: 74  QDDDGQWISLRY 85
            D +G+   L  
Sbjct: 97  VDRNGRDFCLGP 108


>gi|291486342|dbj|BAI87417.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 638

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/435 (11%), Positives = 117/435 (26%), Gaps = 88/435 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN +    R +  N G++ + TP    +  L +     D     ++  
Sbjct: 264 GMPFYLPKGQIVRNELERFSRELQTNAGYNEVRTP-FMMNQRLWEQSGHWDHYRDNMY-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +++             +         +YR  P+   E     R       + 
Sbjct: 322 SEVDDTRFAMKPMNCPG-------HMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNG 374

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +        +              +++D +    G     +L+ R
Sbjct: 375 MLRVRTFCQDDAHIFVREDQIESEIKEAI----------RLIDEVYRTFGFEYSVELSTR 424

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  D L +   + +  +L E              L+ E  +   +F    ++  + 
Sbjct: 425 PEDSLGNDSLWEASERALARVLEE------------LGLSYEINEGDGAFYGPKIDFHIK 472

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +         A ++      +  +      ++   I   +  VR +  +   V+ +I  F
Sbjct: 473 D---------ALKRSHQCATIQLDFQMPEKFDLTYINEHNEKVRPVVIH-RAVFGSIDRF 522

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +  +     F       +   +       +                            
Sbjct: 523 FGILIEHYGGAFPVWLAPLQVQIIPVSHVHLDYCR------------------------- 557

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                                     L+ AGIRA +    ++  G +++ +  +  P  +
Sbjct: 558 ---------------------KVQAELKQAGIRAGID-ERNEKLGYKIRESQVQKIPYVL 595

Query: 434 IQGTGERSRGMLQIK 448
           + G  E     + ++
Sbjct: 596 VLGDHEEQENAVNVR 610


>gi|293382457|ref|ZP_06628392.1| threonine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387159|ref|ZP_06631720.1| threonine--tRNA ligase [Enterococcus faecalis S613]
 gi|312906512|ref|ZP_07765514.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910456|ref|ZP_07769302.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|291080141|gb|EFE17505.1| threonine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083430|gb|EFE20393.1| threonine--tRNA ligase [Enterococcus faecalis S613]
 gi|310627455|gb|EFQ10738.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311289228|gb|EFQ67784.1| threonyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 660

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|227554282|ref|ZP_03984329.1| threonyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229544818|ref|ZP_04433543.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|307289786|ref|ZP_07569723.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|227176572|gb|EEI57544.1| threonyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229310090|gb|EEN76077.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|306499171|gb|EFM68649.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315030800|gb|EFT42732.1| threonyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315575247|gb|EFU87438.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315582393|gb|EFU94584.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 660

 Score = 62.2 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|315158985|gb|EFU03002.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 660

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|302525268|ref|ZP_07277610.1| prolyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302434163|gb|EFL05979.1| prolyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 578

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 32/106 (30%), Gaps = 4/106 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQL 421
                          V +     D       +     L  AG+  E+ L   K   G + 
Sbjct: 470 DEQGLVWPREVSPFDVHVVIAGKDETVREGAEKLAAELDAAGL--EIILDDRKATPGVKF 527

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
             A+    P  ++ G    + G++++KD   G+     + +     
Sbjct: 528 ADAELVGVPTILVVG-RGLANGLVEVKDRRTGEREEIAVDSVVDHL 572


>gi|86741833|ref|YP_482233.1| threonyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86568695|gb|ABD12504.1| Ser-tRNA(Thr) hydrolase [Frankia sp. CcI3]
          Length = 701

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/402 (9%), Positives = 108/402 (26%), Gaps = 46/402 (11%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
                I           + ++E +       +    +          D  +  M      
Sbjct: 341 SRRRHIEAGYSFVNTPHITKSELYQISGHLDWFAEGMYPPMQLDGGTDYYLKPMNCPMHI 400

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
            +   R   +  +  R    G + +    G      R+  L   D       + +   L 
Sbjct: 401 LIFRSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTQDDAHLFCAREQLPTEL- 459

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG--FNELVV 274
               D+   F  G        D  +   +    K++    E  + T    +     +L +
Sbjct: 460 ----DSVLTFVLGLLRDFGLTDFYLELSTRPAGKAVGTDEEWAQATELLREAAQKQDLEL 515

Query: 275 ISELVR-KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
           + +            ++    I R  +  T    ++    F +  +              
Sbjct: 516 VMDPGGGAFYGPKISVQARDAIGRTWQLSTIQVDFQLPRRFGLEYQAADGTRQRPFM--- 572

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                        +    F        + L+    +      + PV +  +    + +  
Sbjct: 573 -------------IHRALFGTIERFFAILLEHYAGALPPW--LAPVQVVGIPITDEHVPY 617

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + L   G+R E+     +    +++ A ++  P  ++ G  + ++G +  +    
Sbjct: 618 LDEVARRLAAHGLRVEVDSSDDR-MQKKIRTAQKQKVPFMLLAGDSDVAQGAVSFR-FRD 675

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           G + +                  +P+ E V+ +   ++  ++
Sbjct: 676 GTQRNG-----------------VPVDEAVAEILDAVERRRQ 700


>gi|288932143|ref|YP_003436203.1| threonyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894391|gb|ADC65928.1| threonyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 618

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/279 (11%), Positives = 83/279 (29%), Gaps = 30/279 (10%)

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
           + +   +   +F +   L+ E +  +  +   D E ++    +        E+  + +  
Sbjct: 341 IVKDMEEAKREFFEQYKLSVEVLKELGIYPE-DYEVAIRVTKDFF------EENKDFIYS 393

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + ++++K        +     V   E+      +A+     ++  Q  V      G   Y
Sbjct: 394 LVDVLKKPILIEMWDRRFFYFVLKFEFN---FVDALDKASALSTVQIDVENAERYGIYYY 450

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALK------SLESSTNNIKEMGPVLITTMDHDSD 388
           D    +     +  +        +   L+                 + P  +  +     
Sbjct: 451 DEKGEKRTPLILHCSASGAVERVMYALLEKAHMEMEKGKLPMLPVWLSPTQVRVIPVSER 510

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            + +     ++L+   IR ++     +    +++ A     P   + G  E   G L + 
Sbjct: 511 HMDRALEVAEVLKKNKIRVDVD-DREETVSKKIRDAATEWIPYIAVIGDKELESGKLTV- 568

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
                                   ++ + + ELV  +KK
Sbjct: 569 ------------TVRSESTLKEQKRVEMSVEELVERIKK 595


>gi|227488647|ref|ZP_03918963.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227543250|ref|ZP_03973299.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227091541|gb|EEI26853.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181059|gb|EEI62031.1| prolyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 588

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 39/128 (30%), Gaps = 16/128 (12%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +   + D ++    +     L  AGI          + G + K
Sbjct: 476 DDKGLVWPACVAPYHVHVVVANKDKEAQDAAEKLVADLDAAGIEVLFDDRPKVSPGVKFK 535

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A+    P  ++ G      G ++ + +  G+  +  +                 +  +V
Sbjct: 536 DAELLGIPYTVVLG-RAFKDGEIEFR-VRAGETSTIPVDG--------------ALEHIV 579

Query: 483 STVKKILQ 490
           +TV++ L 
Sbjct: 580 TTVREALA 587



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 12/134 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+  +I + +R      G   +  P L   E  +   ++          +
Sbjct: 40  GVYTWLPLGLRVLRKIENIVREEMNAIGGQELRFPALLPREPYELTQRWTE----YGNSL 95

Query: 71  FSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           F L+D  G  + L     ++   + +          FP   Y+I   +R+E+       +
Sbjct: 96  FRLKDRKGNDMLLGPTHEEMFTQVVK--DMYSSYKDFPVLLYQIQTKYRDEERPRAGILR 153

Query: 128 FIQCDVDNVGSSAE 141
             +  + +  S   
Sbjct: 154 GREFVMKDSYSFNM 167


>gi|307286857|ref|ZP_07566939.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306502072|gb|EFM71358.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315156485|gb|EFU00502.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315166285|gb|EFU10302.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315169145|gb|EFU13162.1| threonyl-tRNA synthetase [Enterococcus faecalis TX1341]
          Length = 660

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|254458440|ref|ZP_05071865.1| prolyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207084748|gb|EDZ62035.1| prolyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 434

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 57/458 (12%), Positives = 125/458 (27%), Gaps = 77/458 (16%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIE----TPLLEYSDSLGKFLPDEDRPNKG 69
           G  +       +  +I   ++   +  G + ++    TP+      L       D   K 
Sbjct: 38  GLYNFLPLGKIVLEKIRTIVKEELDMAGCNEVQLSFVTPI-----GLWDRSGRADAMGKE 92

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +  +QD       L                                              
Sbjct: 93  MLRIQDRHQNDFVLSP------------------------------------------TN 110

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD- 188
           +  +  +  +  T+  ++ + +         +    +  +  R+ L           +D 
Sbjct: 111 EEAMVELVKNRVTSYKDLPLNLYQINTKFRDEARPRYGLLRGREFLMKDGYSFHASTEDM 170

Query: 189 --KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             + +      + I        + V+   G    + S +F   A+   + I +  S    
Sbjct: 171 IREFDLMEETYKKIFTRLGLDFRVVQADSGAIGGEGSKEFHVLADSGEDTIIVCESCDYG 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              +++ +  E V      EK + EL       + S   +   K    +    +  T   
Sbjct: 231 ANIETIFDNEEEVDAL--NEKTYEELQTKEISEKCSCGGNLSFKKGIEVGHIFQLGTKYS 288

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
                 F   N K +P    + G G          +  +                     
Sbjct: 289 SALEANFSDENGKPRPFEMATFGIGVSRLVASVIEQNHDENGC----------------- 331

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFGNQLKYAD 425
             T         ++ +   D   ++  +     L   G   E MF    + FG ++K A+
Sbjct: 332 IWTKETAPYTINIMVSNIKDETQMTLGEELYLKL--LGENVEAMFDDRKERFGFKMKDAE 389

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               P  +I G  E   G++Q+ D    +++S +  + 
Sbjct: 390 LIGFPYTVIIG-KELDNGLVQVYDRKTQEKISVKTGDI 426


>gi|58698845|ref|ZP_00373719.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630527|ref|YP_002727318.1| prolyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254782927|sp|C0R3N5|SYP_WOLWR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58534643|gb|EAL58768.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592508|gb|ACN95527.1| prolyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 422

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 49/163 (30%), Gaps = 8/163 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  ++  G        + +   I D IR+  +  G   +  P ++ ++ L +     D  
Sbjct: 31  LIKQIASGIYSWLPLGLLVLKNIEDIIRDEMDKSGAIEVLMPCVQPAN-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +  ++D   + +       ++   L R V +++  +       +         R   
Sbjct: 90  GKEMLRIKDRHEEDMLFGPTHEEVATDLIRDVVKSYKDLPLCLYQIQWKFRDEVRPRYGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
                F        D     A  +   M        + +G+  
Sbjct: 150 MRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGLTP 192



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +      + + P  I  ++  +          + L++  +   ++  +  + G +    D
Sbjct: 321 DKGIIWPESVAPFRIGLINLQTKVTEAADKIYKALKSDEV---LYDDTEGSVGVKFSRMD 377

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
               P  II G       ++++K+ A G+    +I+ 
Sbjct: 378 LIGLPWQIIVGKKAIDEKIVEVKNRATGEVKEMQIEE 414


>gi|227550587|ref|ZP_03980636.1| threonine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257888612|ref|ZP_05668265.1| threonyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257897010|ref|ZP_05676663.1| threonyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257898951|ref|ZP_05678604.1| threonyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293378702|ref|ZP_06624860.1| threonine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|293571021|ref|ZP_06682064.1| threonyl-tRNA synthetase [Enterococcus faecium E980]
 gi|227180295|gb|EEI61267.1| threonine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257824666|gb|EEV51598.1| threonyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257833575|gb|EEV59996.1| threonyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257836863|gb|EEV61937.1| threonyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|291608947|gb|EFF38226.1| threonyl-tRNA synthetase [Enterococcus faecium E980]
 gi|292642630|gb|EFF60782.1| threonine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 647

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/443 (10%), Positives = 114/443 (25%), Gaps = 81/443 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D   + +F 
Sbjct: 260 SGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELY-KTSGHWDHYQEDMFP 318

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 319 PMDMGDGEMLVLRPMNCP-------HHMMVYKNAIHSYRELPIRIAEL------------ 359

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 360 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 415

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 416 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 465

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 466 FYGPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 525

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                                            
Sbjct: 526 RFVAYLTEVYKGAFPTWLA---------------------------------------PI 546

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +      +  + +     + LR      E+    ++  G +++ +  +  P 
Sbjct: 547 QATIIPVSVDAHGDYAYEIKERLQM-KGLR-----VEVD-DRNEKMGYKIRASQTQKIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGK 454
            ++ G  E     + ++     +
Sbjct: 600 QLVVGDKELEDATVNVRRYGSKE 622


>gi|56419792|ref|YP_147110.1| prolyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819753|sp|Q5L0J4|SYP_GEOKA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56379634|dbj|BAD75542.1| proline-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 567

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 41/157 (26%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++   IR      G   +  P L+ ++ L +           
Sbjct: 34  QSASGVYTFLPLGQRVLQKVEAIIREEMNRIGAMELFMPALQPAE-LWQQSGRWYSYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  L+D   +  +L     ++   + R   + +  +          +R     R      
Sbjct: 93  LMRLKDRHERDFALGPTHEEMITAIVRDEVKTYKRLPLVLYQIQTKFRDEKRPRFGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F             S +     M    A+     G
Sbjct: 153 REFMMKDAYSFHTSKESLDETYNNMYEAYANIFRRCG 189



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 20/124 (16%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              ++      L+T      +  +  + + + L  AG    ++    +  G +   +D  
Sbjct: 464 WPASVAPFHIHLLTANAKSDEQRALAEEWYEKLGQAGFEV-LYDDRPERAGVKFADSDLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             PL +  G      G++++K    G+                     +P+SELV T ++
Sbjct: 523 GIPLRVTVGKR-AGEGVVEVKVRKTGE------------------TFDVPVSELVDTARR 563

Query: 488 ILQE 491
           +LQ 
Sbjct: 564 LLQS 567


>gi|315126673|ref|YP_004068676.1| prolyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015187|gb|ADT68525.1| prolyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 574

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 42/160 (26%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   +  G        +R+  ++ + +R   +  G   +  P+++ +D L +        
Sbjct: 31  MIRRVASGLYTWLPSGLRVLRKVENIVREEMDKAGAIEMLMPVIQPAD-LWEESGRWSEF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +    D   +  ++     ++     R    ++  +           R     R   
Sbjct: 90  GPELMRFTDRHNREFAMGPTHEEVITDFVRKEINSYKQLPITLYQVQTKVRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F               +     M     +  E +G
Sbjct: 150 MRAREFTMKDAYSFHLTDECLDATYQVMHKAYCNIFERLG 189



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                Q L+ AG+   +F    +  G      +    P  ++ G        +++K+   
Sbjct: 495 ANNLYQGLKDAGLDV-LFDDRKERPGVMFNDMELLGVPYTLVIGERNLDENKVELKNRRT 553

Query: 453 GKELSREIKNNESWREARVA 472
           G++L  +I +     + +  
Sbjct: 554 GEKLMIDIDSAIETIKNQFN 573


>gi|223041831|ref|ZP_03612021.1| prolyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017400|gb|EEF15821.1| prolyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 317

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +    D   +   L     ++   L R    ++  +       +  
Sbjct: 84  GRWNDYGAELLRFNDRGNRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTK 138


>gi|70608065|ref|YP_256935.1| threonyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68568713|gb|AAY81642.1| threonyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 387

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           ++       M P+ +  +   SD L         ++    R ++   +  N G+++  A 
Sbjct: 263 KAPPMLPLWMNPIQVRILPVKSDYLQDAFKIASYIKA---RVDVDDIND-NLGSKIARAG 318

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +   P  ++ G  E   G L IK   K ++ S  I       +
Sbjct: 319 KEWIPFVVLLGEREVKTGSLTIKLREKNEQRSYTIDELNEEIK 361


>gi|329947841|ref|ZP_08294773.1| proline--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328523465|gb|EGF50563.1| proline--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 619

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 35/134 (26%), Gaps = 18/134 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN--Q 420
                S         V +     D       +     L   G   E+     +      +
Sbjct: 501 DDKGLSWPVQIAPYHVQVLATGKDQAVFDVAEQVASALDADG--VEVLYDDRRKVSAGVK 558

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
              A+    P  ++ G      G ++I+D   G   S       +              E
Sbjct: 559 FADAELLGLPYTLVVGRDLAKEGTVEIRDRRTGDRRSVPADAAAA--------------E 604

Query: 481 LVSTVKKILQENKE 494
           L +TV+  L+  + 
Sbjct: 605 LSATVRAALEAARN 618



 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   +I   +R   +  G   +  P L  S+         +     +F L
Sbjct: 48  GVYTWLPLGLRTLRKIEAIVRQGMDAMGGQEVHFPALLPSEPYQA-TGRWNDYGPTLFKL 106

Query: 74  QDDDGQWISLRY 85
            D       L  
Sbjct: 107 HDRKDGDYLLAP 118


>gi|319790149|ref|YP_004151782.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114651|gb|ADU97141.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 658

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      L         L+ AGIR ++    S   G +++ A+ +  P  +
Sbjct: 558 WLAPVQAVIIPVSDKYLDYADEVYAKLKEAGIRVKLD-DESAKVGYKIRKAETQKIPYML 616

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           I G  E+    + ++   +G     E++         + + 
Sbjct: 617 IVGEREKENQTVSVRSKREGDLGEMELQQFLDKILTEIKEK 657



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G          IR  I   +   +   G+  I TP +  +D L K     +   + +F
Sbjct: 263 GLVFWHPNGAIIRQEIEQWVEEEHRKRGYQRIYTPHIMKAD-LWKRSGHYNFYRENMF 319


>gi|255305562|ref|ZP_05349734.1| threonyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 639

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 43/137 (31%), Gaps = 3/137 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +    F      + + ++              V I  +      +       +
Sbjct: 501 EKHRPVMIHRVAFGSIERFIGILIEHYAGKFPVWLSPTQVKILPIS--DKFMDYANEVKK 558

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L   GIR E+    ++  G +++ A     P  +I G  E +   + ++   KG+  S 
Sbjct: 559 ELFDKGIRVELD-DRAEKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSI 617

Query: 459 EIKNNESWREARVAQIT 475
           ++    +     +    
Sbjct: 618 KLDEFIASISKEIESRE 634



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E   GF     K + ++N +L   R I+   G+  IE+P++  +  L +        
Sbjct: 254 MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPII-LNRKLWETSGHWYHY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
            + +++++  D +  +++      
Sbjct: 313 KENMYTVKI-DDEDYAIKPMNCPG 335


>gi|209969467|dbj|BAG80638.1| hypothetic protein [Streptococcus parauberis]
          Length = 395

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/381 (11%), Positives = 104/381 (27%), Gaps = 16/381 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +      +  Q D+       +  +  +  M       V 
Sbjct: 31  KELASGYQHVYTPPMASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVY 90

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 91  KNHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRAL 150

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                D  +  NLT  +    +S+         ++  E+ +   A  K   +  +  +  
Sbjct: 151 QL-IIDVYEDFNLTDYRF--RLSYRDPKDTHKYYDNDEMWENAQAMLKAALD-EMGVDYF 206

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 207 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 255

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 256 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKT 315

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  GIRA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 316 LRDRGIRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKAVNVRRYGSKATHTES 374

Query: 460 IKNNESWREARVAQITIPISE 480
           I+       A +A+ + P+SE
Sbjct: 375 IEEFVDNILADIARKSRPVSE 395



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 80/326 (24%), Gaps = 31/326 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     +   + +F  
Sbjct: 9   GLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPMASVELY-KTSGHWEHYQEDMFPT 67

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N  H        I   
Sbjct: 68  MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVHSYRELPIRIAEL 107

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    +      I    ++ L  I   I ++ D  L +
Sbjct: 108 GMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLI---IDVYEDFNLTD 164

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--- 249
               L   D  D          + E              +   + +   +F    L+   
Sbjct: 165 YRFRLSYRDPKDTHKYYDN-DEMWENAQAMLKAALDEMGVDYFEAEGEAAFYGPKLDIQV 223

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K+     E +                 + +   G     + I   ++  +E +T  + E 
Sbjct: 224 KTALGNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAILIET 281

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYD 335
             G          V    +      D
Sbjct: 282 YKGAFPTWLAPHQVTVIPISNEAHID 307


>gi|325958418|ref|YP_004289884.1| glycyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329850|gb|ADZ08912.1| glycyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 575

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  + +      K     + LR  GI AE     S   G +   +D    P A+    
Sbjct: 473 VNVFPLVNKDKLAEKAHEIREELRNQGIIAE--YDGSGTIGRRYARSDEIGVPFAVTVDH 530

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNES 465
                  + I++    +++   ++N  S
Sbjct: 531 ETLENNTVTIRNRDNLEQVRIPVQNVYS 558



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++N I+   R  Y    GF  IE+P +   ++L    
Sbjct: 28 GFFDYGPLGATLKNNIISKWRKYYIVGEGFYEIESPTIMPEEALKASG 75


>gi|255654593|ref|ZP_05400002.1| threonyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 639

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 43/137 (31%), Gaps = 3/137 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +    F      + + ++              V I  +      +       +
Sbjct: 501 EKHRPVMIHRVAFGSIERFIGILIEHYAGKFPVWLSPTQVKILPIS--DKFMDYANEVKK 558

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L   GIR E+    ++  G +++ A     P  +I G  E +   + ++   KG+  S 
Sbjct: 559 ELFDKGIRVELD-DRAEKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSI 617

Query: 459 EIKNNESWREARVAQIT 475
           ++    +     +    
Sbjct: 618 KLDEFIASISKEIESRE 634



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E   GF     K + ++N +L   R I+   G+  IE+P++  +  L +        
Sbjct: 254 MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPII-LNRKLWETSGHWYHY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
            + +++++  D +  +++      
Sbjct: 313 KENMYTVKI-DDEDYAIKPMNCPG 335


>gi|126698152|ref|YP_001087049.1| threonyl-tRNA synthetase [Clostridium difficile 630]
 gi|254974173|ref|ZP_05270645.1| threonyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091574|ref|ZP_05321052.1| threonyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255099679|ref|ZP_05328656.1| threonyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255313300|ref|ZP_05354883.1| threonyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255515991|ref|ZP_05383667.1| threonyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255649082|ref|ZP_05395984.1| threonyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|306519197|ref|ZP_07405544.1| threonyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|123066930|sp|Q189B8|SYT_CLOD6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115249589|emb|CAJ67406.1| Threonyl-tRNA synthetase [Clostridium difficile]
          Length = 639

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 43/137 (31%), Gaps = 3/137 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +    F      + + ++              V I  +      +       +
Sbjct: 501 EKHRPVMIHRVAFGSIERFIGILIEHYAGKFPVWLSPTQVKILPIS--DKFMDYANEVKK 558

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L   GIR E+    ++  G +++ A     P  +I G  E +   + ++   KG+  S 
Sbjct: 559 ELFDKGIRVELD-DRAEKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSI 617

Query: 459 EIKNNESWREARVAQIT 475
           ++    +     +    
Sbjct: 618 KLDEFIASISKEIESRE 634



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E   GF     K + ++N +L   R I+   G+  IE+P++  +  L +        
Sbjct: 254 MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPII-LNRKLWETSGHWYHY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
            + +++++  D +  +++      
Sbjct: 313 KENMYTVKI-DDEDYAIKPMNCPG 335


>gi|319898898|ref|YP_004158991.1| Prolyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402862|emb|CBI76413.1| Prolyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 442

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/450 (11%), Positives = 115/450 (25%), Gaps = 61/450 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++ ++I   IR   E  G   I  P ++ +D L +     +  
Sbjct: 31  MVRQQTSGIYSWLPLGKKVLDKICKIIREEQERAGAVEILMPTIQSAD-LWRESGRYNDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GLEMLRIKDRQDRDLLYGPTNEEMITDIFRSYVRSYKDLP--LNLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S      +         +  +             R  L  I     
Sbjct: 148 GVMRAREFLMKDAYSFDLDYASAKTSYNRMFVAYLRTFS---------RIGLKAI----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      V+   G    + S +F   A      I      
Sbjct: 194 --------------------------PVRADTGPIGGELSHEFIILAETGESSI------ 221

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                ++ +      +      +    ++V     +  +    +  +   + V       
Sbjct: 222 --FCDKRFLEFTVPPISIDFTDKDILADIVRQWTSLYAATEEMHN-EEEWSKVSTNNKLA 278

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
               E    F    +   P+    +G     DG        +       +  + +  +  
Sbjct: 279 ARGIEVGHIFHFGTKYSAPMGAKVMGQ----DGKEHLISMGSYGIGPSRLVAAIIESSHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                           I  M  D +  S       Q L   G    +   + +  G++  
Sbjct: 335 EHGIIWPKPITPFDCGIINMKPDDEKCSYMCETLYQRLIHGGFDPLLDDTNER-PGSKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
             D    P+ +I G    ++  ++IKD   
Sbjct: 394 TMDLIGLPIQMIIGPKSAAQNEVEIKDRKT 423


>gi|315026573|gb|EFT38505.1| threonyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 660

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|253580110|ref|ZP_04857377.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848629|gb|EES76592.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 653

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 52/163 (31%), Gaps = 4/163 (2%)

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                   ++D       G+          S+G     +A    + +      + P  + 
Sbjct: 490 QWDALLAEQFDMYYIDENGEKQRPYIIHRTSMGCYERTLAWLIEKYAGMFPTWLCPEQVR 549

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +       +        L+  GIR  +    S+  G +++ A     P  +I G  E  
Sbjct: 550 VIPISEKFHNYAAKVEAQLKENGIRCSVD-QRSEKMGYKIREARLARVPYMLIVGAKEEE 608

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
            G + ++    G E  +++ +  +  +  +   TI   E+   
Sbjct: 609 EGKVSVRSRYLGDEGMKDLGDFLAAIKEEIKNKTIRKIEVQEE 651



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 65/218 (29%), Gaps = 10/218 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +   +   I +     G+   +TPL+  SD   K     D   +G+F L
Sbjct: 260 GLPLIMPNGVIMMQELQRWIEDEETKRGYIRTKTPLMAKSDLY-KISGHWDHYKEGMFVL 318

Query: 74  QDD--DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
            D+  D +  +LR  +T P   YV            +YR  P+   E     R     + 
Sbjct: 319 GDEETDKEVFALRP-MTCPFQYYV------YKAEQHSYRDLPLRYGETSTLFRNEDSGEM 371

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      ++  + +     ++            +    + + +   +     +   
Sbjct: 372 HGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLQVLGVEEDVTYHLSKWDPNNRE 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           + +      ++ +    Q ++ L      D       G
Sbjct: 432 KYIGDAEVWNQTEAHIRQMLEELNIPFTEDVGEAAFYG 469


>gi|222528589|ref|YP_002572471.1| prolyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254782881|sp|B9MPD7|SYP_ANATD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222455436|gb|ACM59698.1| prolyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 572

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 71/270 (26%), Gaps = 9/270 (3%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         R+  +I + +R   +  G   +    L   + L +  
Sbjct: 26  MLRSGFMR-QLSSGIYVYLPLGYRVLRKIENIVREEMDRSGAQEVHMSALMPKE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
                    +F ++D + +   L     +    + R    ++  +       +       
Sbjct: 84  GRWAVFGPEMFRIKDRNEREYCLGPTHEEAFTYIVRNEISSYRDLPKILYQIQTKFRDER 143

Query: 118 EKH-GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
               G  R R+F   D  +        D     M    +        D  I   +   + 
Sbjct: 144 RPRFGVMRCREFTMKDAYSFDIDENGLDISYQKMYDAYVRIFKRCGLDVKIVEADTGAMG 203

Query: 177 GILEK-IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           G       +       E           +    + +   +               N+   
Sbjct: 204 GASSHEFMVPSSVGEAEIAYCKACGYAANLEKAECLDEPVENKEEPKEKQEVYTPNVR-- 261

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
            I+ +VSFL ID  + +  +          
Sbjct: 262 TIEELVSFLGIDSTRFVKTMIYKADDKFVA 291



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 34/108 (31%), Gaps = 2/108 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +     +++     D +         + L+  G+   +     +  G + K AD 
Sbjct: 461 IWPITVAPYEVIIVPVNVKDENQKKIAFEIYENLQRNGVEVLIDDRDERA-GVKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P  +  G    S G L+I++    +    EI+         + + 
Sbjct: 520 IGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIEKAIEVVINLIREE 566


>gi|312951108|ref|ZP_07770013.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310630884|gb|EFQ14167.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315154152|gb|EFT98168.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0031]
          Length = 660

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 276 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 334

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 335 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 375

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 376 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 431

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 432 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 481

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 482 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 541

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 542 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 586

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 587 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 615

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 616 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 655


>gi|308272327|emb|CBX28933.1| Threonyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 637

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 50/146 (34%), Gaps = 3/146 (2%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    + +   +    +        + ++           M PV    +  + + +   
Sbjct: 492 IDKNNEKCRPIMIHRVIYGSIERFFGILIEHFAGKFPLW--MAPVQAALLPINDELIPYA 549

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                +L   GIR E+    +++   +++ A     PL I  G  E   G + +++L+  
Sbjct: 550 AGIRDVLEKEGIRTELD-SRTESLKKKIRDAQLSYVPLIITCGPKEMESGTVSVRNLSGK 608

Query: 454 KELSREIKNNESWREARVAQITIPIS 479
            +    I++       ++ +  + + 
Sbjct: 609 IKYGVTIEDFVKIVLFQIKERKLDLE 634



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 6/77 (7%), Positives = 25/77 (32%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +   ++   +  +   G+   +TP++       +     +   + +++ 
Sbjct: 257 GMPFFHPKGMSVWEALISYWKIEHRAAGYVETKTPIMLNRSLWERS-GHWENYRENMYTS 315

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 316 V-VDETEYAIKPMNCPG 331


>gi|295396075|ref|ZP_06806258.1| threonine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971016|gb|EFG46908.1| threonine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 667

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 43/121 (35%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    + L   +   Q L+  GIR E+   + + F  +++ A +   P  +
Sbjct: 565 WLSPVQAIMVPVADEFLPYVEEIAQKLKAHGIRVEIDDSTDR-FPKKIRNASKSKVPYTL 623

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +R    +  +    G + +                  +P+ + V  +   ++   
Sbjct: 624 IAGGEDRDAHAVSFR-FRDGSQENG-----------------VPVDQAVERIVDAIKTKA 665

Query: 494 E 494
           +
Sbjct: 666 Q 666


>gi|167746735|ref|ZP_02418862.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662]
 gi|167653695|gb|EDR97824.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662]
          Length = 644

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L         L+ AGIRAE+    ++  G +++ A     P  +
Sbjct: 533 WLAPVQVKVIPISDKHLDYGTKVLDALKAAGIRAEID-TRAEKMGYKIREAQLHKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           + G  E     + ++   KG E    + +        +    I   E
Sbjct: 592 VVGGKEEENQAVSVRSRFKGDEGQMSLDDFICAIRKEIETKEIRQVE 638



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + ++N +LD  R I+   G+  I +P++  S  L +     D   + +++ 
Sbjct: 260 GFPFFLPNGMVLKNTLLDYWREIHNKAGYVEISSPIM-LSRHLWETSGHWDHYQENMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 VI-DEEDFAIKPMNCPG 334


>gi|114152232|sp|Q3IGT7|SYP_PSEHT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 574

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/142 (10%), Positives = 46/142 (32%), Gaps = 6/142 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   +  G        +R+  ++ + +R          +  P+++ +D L +     D  
Sbjct: 31  MIRRVASGLYTWLPTGLRVLRKVENIVREEMNKANAIEMLMPVIQPAD-LWEESGRWDEF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +  +L     ++     R    ++  +      Y+I    R+E+    
Sbjct: 90  GPELMRFTDRHNRTFALGPTHEEVITDFVRKEISSYKQLP--ISLYQIQTKVRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADA 145
              +  +  + +  S   + + 
Sbjct: 148 GVMRAREFTMKDAYSFHLSDEC 169



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 3/102 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          + I  M+               Q L+ AG+   +F    +  G  
Sbjct: 463 DQYGIIWPQPIAPFDLAIVPMNMHKSHRIPDIATNLYQGLKDAGLDV-LFDDRKERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
               +    P  ++ G        +++K+   G++L  +I  
Sbjct: 522 FNDMELIGVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDT 563


>gi|229173066|ref|ZP_04300617.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228610399|gb|EEK67670.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 639

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 80/264 (30%), Gaps = 23/264 (8%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++  +S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEEALENVLHSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AGIR E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEIADKLAQAGIRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +   K  G +++ A  +  P  ++ G  E   G + ++    G++ S  I+        
Sbjct: 575 DVRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGSVNVR--KYGEDQSEVIE-------- 623

Query: 470 RVAQITIPISELVSTVKKILQENK 493
                   ++  V ++K+ ++  K
Sbjct: 624 --------LNGFVESIKEEIKNKK 639



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/258 (10%), Positives = 67/258 (25%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   K           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYKYQEVRTPFMMNQELWEKS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      +  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------EYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  ++ ++     +  L  + R +       G  +     D +         +   
Sbjct: 430 MGDDKLWEQAEEALENVLHSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E        EK    
Sbjct: 490 QMPEKFDLNYIDEKNEKR 507


>gi|212636240|ref|YP_002312765.1| prolyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212557724|gb|ACJ30178.1| Prolyl-tRNA synthetase, bacterial [Shewanella piezotolerans WP3]
          Length = 596

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 41/160 (25%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  +I   +R      G   I  P+++ +D L +     D+ 
Sbjct: 57  MIRRNASGLYSWLPTGLRVLRKIEAIVREEMNKAGSVEILMPMVQPAD-LWQETGRFDKF 115

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +   QD   +   L     ++   + R    ++  +       +             
Sbjct: 116 GPELLRFQDRHNRDFVLGPTHEEVITDIVRKEVNSYKQLPLNLYQIQTKFRDEVRPRFGV 175

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F               +     M     + L  +G
Sbjct: 176 MRSREFLMKDAYSFHLEQECMDETYEAMFQAYNNILTRLG 215



 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K   +   Q L  AG+         +  G  
Sbjct: 486 DDRGIIWPEAIAPFQVGILPMNMHKSHRVKDMAEQLYQDLTDAGMEVLFDDRKERA-GVM 544

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      G+ + K+   G++          + +A+ A
Sbjct: 545 FADMELVGLPNVVVIGDRNIDNGVFEYKNRRTGEKQDVPFDQIVEFLKAQQA 596


>gi|153814564|ref|ZP_01967232.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756]
 gi|317501270|ref|ZP_07959474.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|145848058|gb|EDK24976.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756]
 gi|316897337|gb|EFV19404.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 641

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L       + L+ AGIRAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVKVLPISDKYLDYAGKVLEDLKEAGIRAEID-SRAEKIGYKIREAQMKKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E   G + ++    G E    ++      +  VA
Sbjct: 592 VVGAKEEEEGKVSVRSRFAGDEGQCGLEEFIEQIKEEVA 630



 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + ++N +LD  R I+   G+  I TP++  S  L +     D   + +++ 
Sbjct: 260 GFPFFLPNGMVLKNTLLDYWREIHRRAGYVEINTPIM-LSRHLWETSGHWDHYKENMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 V-VDEEDFAIKPMNCPG 334


>gi|329298700|ref|ZP_08256036.1| prolyl-tRNA synthetase [Plautia stali symbiont]
          Length = 572

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        IR+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGIRVLRKVENIVREEMNNAGAIEISMPVVQPAD-LWEESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  ++D   +   L  
Sbjct: 90  GPELLRIKDRHERPFVLGP 108



 Score = 41.4 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 27/108 (25%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K   +     LR  GI   +     +  G  
Sbjct: 461 DERGIIWPAALAPFEVAILPMNMHKSFRVKELAEQLYNELRAKGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
               +    P  I+ G        ++ K  A  ++   +  +   +  
Sbjct: 520 FADMELIGVPHTIVIGDRNLDNQEIEYKARAASEKQMIKQHDIVDFLS 567


>gi|88942337|sp|Q7UJ52|SYT_RHOBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|327537946|gb|EGF24643.1| threonyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 743

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/470 (11%), Positives = 122/470 (25%), Gaps = 40/470 (8%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
              K  R+R  + D +R    + G+DP+ +P +   E  ++ G F    D     +F   
Sbjct: 288 WLPKGARVRVTLEDFLRRELLSRGYDPVYSPHIGRVEMYETSGHFPYYRDSQFAPLF--- 344

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCR----TYRIGPVFRNEKHGPGRFRQFIQ 130
              G  +         L    +   D                 VF  +            
Sbjct: 345 ---GSEVG-------GLLDAWSTRLDKDDLSKDDEDKLIAAAEVFGVKLPDYKPSASNDA 394

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                           +  M       +   +   +  +  R    G + +    G+   
Sbjct: 395 KKDVLHRWQLNHERYLLKPMNCPHHCQIFGAQPRSYRQLPLRLFEFGTVYRHEQTGELNG 454

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
             R+  L   D         V+        + +    +   L   ++ + +         
Sbjct: 455 MMRVRGLTQDDAHIFCTADQVEEEFR-ATIELTKFVLESVGLDDYRVQLSLRDPDSSKYV 513

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR-IKISSTIVRGLEYYTGCVYEA 309
              E ++  +G + G    + L    E    + Y       +   I R  +  T    + 
Sbjct: 514 GSEENWDHAEGALRGVLEQSGLSFNEEPGEAAFYGPKADFMVRDCIGRSWQLGT---VQL 570

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
               P   + +                  +  +   +    F        + ++    + 
Sbjct: 571 DYNLPERFKLEYKG------------NDNATHRPVMIHRAPFGSLERFTGMLIEHFAGAF 618

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   + +  +     S+       + L  AG +  +     K    +++ A     
Sbjct: 619 PMWLSPEQIRV--LPLSDKSVEYATAVAKQLDEAGFKVTVDASDGK-VQAKIRNAQIDLV 675

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
               + G  E   G + ++D  +G   S  IK   +  +  V    +  +
Sbjct: 676 NYMAVVGPKEAESGQVALRDRIEGDLGSMPIKEAIARLQKEVETRQVRQA 725


>gi|317471544|ref|ZP_07930893.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900979|gb|EFV22944.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 539

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L         L+ AGIRAE+    ++  G +++ A     P  +
Sbjct: 429 WLAPVQVKVIPISDKHLEYGTKVLDALKAAGIRAEID-TRAEKMGYKIREAQLHKIPYML 487

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           + G  E     + ++   KG E    + +        +    I   E
Sbjct: 488 VVGGKEEENQAVSVRSRFKGDEGQMSLDDFICAIRKEIETKEIRQVE 534



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + ++N +LD  R I+   G+  I +P++  S  L +     D   + +++ 
Sbjct: 156 GFPFFLPNGMVLKNTLLDYWREIHNKAGYVEISSPIM-LSRHLWETSGHWDHYQENMYTT 214

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 215 VI-DEEDFAIKPMNCPG 230


>gi|260428562|ref|ZP_05782541.1| prolyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260423054|gb|EEX16305.1| prolyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 447

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/460 (9%), Positives = 120/460 (26%), Gaps = 63/460 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I + I    +  G  P+  P ++ ++ L +     D  
Sbjct: 31  MIKQASAGIYSWLPMGFKVLRKIENIIHEEQQRAGHIPMLMPTIQSAE-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  + D   + +       +L   + R    ++  +      Y+I   FR+E     
Sbjct: 90  GAEMLRITDRHDREMLFTPTAEELITDIFRANVSSYRDLP--LTMYQIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFLM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A     +       
Sbjct: 180 SYLRTYERMGLQAI------------PMRADSGPIGGDDTHEFLVLAETGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D + +  +  +      + E+    L   +    ++    +    +           
Sbjct: 221 VFYDSQITDLKFGDREIDYDSREQCQAVLEEFTSRYARTDETHDEAVFNQVPEERRRVAR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA-L 362
           G     I  F     +        +G                    G S  +  +I A  
Sbjct: 281 GIEVGQIFYFGTKYSE-------PLGATVADADGNQVPVHMGSHGIGVSRLLGAIIEASH 333

Query: 363 KSLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                            I  +   D+++ +  +     L   G+   ++  +++  G + 
Sbjct: 334 DDKGIIWPEGVTPFHCGIVNLKTGDAEADAACEKIHAALIALGLD-PLYDDTTERAGAKF 392

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              D    P  I  G      G++++     G+      +
Sbjct: 393 ATMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEEMPPE 432


>gi|22299745|ref|NP_682992.1| threonyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|73919834|sp|Q8DGW0|SYT_THEEB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|22295929|dbj|BAC09754.1| threonyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 605

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 42/126 (33%), Gaps = 3/126 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              V +  +    +     +     LR  G+R
Sbjct: 474 HRAPFGSLERLIGILIEEYAGDFPFWLAPEQVRLLPVG--DEQRPYAERVAAQLRERGVR 531

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +     +  G Q++ A+ +  P+  I G  E     + I+  A G   +  +++  + 
Sbjct: 532 VSVDRSGDR-LGKQIRNAETQKIPVMGIIGAKEVEHETVSIRTRAAGDVGTFALEHLIAK 590

Query: 467 REARVA 472
             + +A
Sbjct: 591 LTSAMA 596



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +R+ + D ++      G+ P+ TP +   D   K      +  + +F L
Sbjct: 215 GLPLWTPRGTVLRSTLEDFLKKEQLKRGYLPVVTPHIARVDLF-KTSGHWQKYKEDMFPL 273

Query: 74  Q 74
            
Sbjct: 274 M 274


>gi|283783528|ref|YP_003374282.1| proline--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441181|gb|ADB13647.1| proline--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 610

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 34/111 (30%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D  +    +   + L   GI          + G + K
Sbjct: 497 DDAGLAWPMAIAPAQVHVVATGKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFK 556

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            A+    PL  + G    + G ++I+D       +  +    +    RV++
Sbjct: 557 DAELVGVPLIAVAGRDTVNNGTIEIRDRNGSNVEAVPVDEAAARIVERVSE 607



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 8/88 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLG 57
           M +   +R   P G        +++ N++   IR+     G   +  P L   E  ++  
Sbjct: 31  MQRAGYIRKSAP-GVWTWLPLGLKVLNKVQAIIRDEINGIGAQEVHFPALLPREPYEATN 89

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRY 85
           ++    D     +F L+D       L  
Sbjct: 90  RWEEYGDN----IFRLKDRHQADYLLAP 113


>gi|119384044|ref|YP_915100.1| prolyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|152112938|sp|A1B1L0|SYP_PARDP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119373811|gb|ABL69404.1| prolyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 450

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/474 (10%), Positives = 121/474 (25%), Gaps = 63/474 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  RI   +       G   +  P L+ +D L +     D  
Sbjct: 31  MIKQQAAGIYSWLPLGYKVLRRIEQIVHEEQARAGHIAMLMPTLQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  ++D   + +       ++   + R    ++  +      Y +   FR+E     
Sbjct: 90  GEEMLRIKDRHKRDLLYGPTNEEMITDIFRSHVNSYKDLP--LTLYHVQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFLM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D + +F   A     ++      
Sbjct: 180 SYLRTYERMGLQAI------------PMRADGGPIGGDYTHEFLVLAETGESEVFYDSEI 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
             +       +  ++ +     E+  +      E    + +     K    + RG+E   
Sbjct: 228 TDLKFGDRRIDYDDVAQCRAVLEEFTSRYARTDETHDAALFEQIP-KERRRVARGIEVGQ 286

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +      P+      P            DG        +       +  + +  +  
Sbjct: 287 IFYFGTKYSEPMGATVVGP------------DGSRVPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                         V I  +     S     +     L+  G+ A ++    +  G +  
Sbjct: 335 DRGIIWPEGVTPFHVGIVNLKQGDASTDGACEALYAELKAQGLDA-LYDDRDERAGAKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
             D    P  I  G    +   +++     G+  S E+   E+    R     +
Sbjct: 394 TMDLVGLPWRITVGPRGLAANKVELTSRRTGE--SVEMSPQEAVVRLREIYQPV 445


>gi|310796349|gb|EFQ31810.1| threonyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 791

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/471 (9%), Positives = 118/471 (25%), Gaps = 50/471 (10%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +L  I+  Y    +  + +P +  ++ L K     D     +F + D D
Sbjct: 348 WLPHGARIYNTLLAYIKEQYFKRDYHEVISPNMYNAE-LWKISGHWDHYKDDMF-VIDVD 405

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +   L+           A                 V    +                  
Sbjct: 406 KEKFGLKPMNCPGHCLMFAHTPKAYHQLPWRVADFGVLHRNEASGALSGLTRVRRFQQDD 465

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +     + ++   +++  + +             R         +    +  L E     
Sbjct: 466 AHIFCREDQIKSEISNLFDFLREMYGLLGFTFKLR---------LSTRPEKYLGELETWN 516

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           RA D L +   +     L E     + +   GA    +    ++  L+ + + +  +L  
Sbjct: 517 RAEDMLKQALDE---FALTEAGVPWTLNEGDGAFYGPKIDIKIMDVLNREWQCATIQLDF 573

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            +      E    +        +         K     V+  +              V  
Sbjct: 574 QLPQNFGLEYVSAD-----APAKSKEEAPAAPKAPEVKVKDPQAI------IDSAAGVGE 622

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           EK+K      +  G          +   +             + ++              
Sbjct: 623 EKEKKRTIKPLTNG--------CQRPVIIHRAMAGSIERFTGILIEHFAGKWPFWLSPRQ 674

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           +++  +      +   +      +  G+  ++ L  +     +++ A         + G 
Sbjct: 675 IMVIPVGKG--FVEYAEEVQATFKKQGMWVDVDLSGN-TLPKKIRSAQLSQYNFIFVVGD 731

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            E     + I+                    ++     + + E V  +KK+
Sbjct: 732 EEMKHKQVNIRYRDD--------------TSSQDRGKPVDVIEAVERLKKL 768


>gi|85093975|ref|XP_959801.1| threonyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28921255|gb|EAA30565.1| threonyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 788

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/431 (9%), Positives = 107/431 (24%), Gaps = 39/431 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +RI N I++ I+  Y   G+D + TP + ++ +L +           +F L D D
Sbjct: 344 WLPHGMRINNAIMEYIKEEYWKRGYDEVMTPNM-FNVALWEQSGHLAHYKDDMFIL-DVD 401

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +   L+               +               +        F    + +     
Sbjct: 402 KEQFGLKP-------------MNCPAHAMMFRHRDRSHKELPLRLADFGVLHRNEASGAL 448

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           S                     IK     +    +     +     L    +  + +  +
Sbjct: 449 SGLTRVRRFQQDDAHIFCREDQIKAEVADLFDFMKSFYGMLGLTFKLKLSTRPEKYMGEI 508

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ +    + +   +         +   GA    +    ++  L+   + +  +L  
Sbjct: 509 ETWDRAEARLKEALNEFVAATGGTWELNEGDGAFYGPKIDIAVLDCLNRPWQCATIQLDF 568

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                 + E    +     +  + +   +             E         ++  P+  
Sbjct: 569 QQPINFSLEYMTADAQAKQDEDKAASKAAKPEAPKEEEEAPKEGEEKKKKALLVKKPLTA 628

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
              +PV+      G                            +  +              
Sbjct: 629 GCARPVMIHRAMAGS---------------------IERFTAILAEHFAGKWPFWMSPRQ 667

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V++  +      L   +     L+   I  ++   S      +++ A         + G 
Sbjct: 668 VMVIPVGMG--FLDYAKEVALTLKKEKIHVDVD-SSGNTLQKKIRSAQLAQYNFIFVVGD 724

Query: 438 GERSRGMLQIK 448
            E++   + I+
Sbjct: 725 DEKTNRKVNIR 735


>gi|296449369|ref|ZP_06891150.1| threonine--tRNA ligase [Clostridium difficile NAP08]
 gi|296880697|ref|ZP_06904650.1| threonine--tRNA ligase [Clostridium difficile NAP07]
 gi|296261715|gb|EFH08529.1| threonine--tRNA ligase [Clostridium difficile NAP08]
 gi|296428315|gb|EFH14209.1| threonine--tRNA ligase [Clostridium difficile NAP07]
          Length = 670

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 43/137 (31%), Gaps = 3/137 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +    F      + + ++              V I  +      +       +
Sbjct: 532 EKHRPVMIHRVAFGSIERFIGILIEHYAGKFPVWLSPTQVKILPIS--DKFMDYANEVKK 589

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L   GIR E+    ++  G +++ A     P  +I G  E +   + ++   KG+  S 
Sbjct: 590 ELFDKGIRVELD-DRAEKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSI 648

Query: 459 EIKNNESWREARVAQIT 475
           ++    +     +    
Sbjct: 649 KLDEFIASISKEIESRE 665



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E   GF     K + ++N +L   R I+   G+  IE+P++  +  L +        
Sbjct: 285 MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPII-LNRKLWETSGHWYHY 343

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
            + +++++  D +  +++      
Sbjct: 344 KENMYTVKI-DDEDYAIKPMNCPG 366


>gi|160936998|ref|ZP_02084362.1| hypothetical protein CLOBOL_01887 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440188|gb|EDP17935.1| hypothetical protein CLOBOL_01887 [Clostridium bolteae ATCC
           BAA-613]
          Length = 636

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 3/108 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++           + PV +  +     S+       + L+ AGIR
Sbjct: 510 HRVCFGSIERFIGILIEHFAGKFPVW--LAPVQVKVIPVSEKSMDYATGVYEKLKAAGIR 567

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            E+     K  G +++ A     P  ++ G  E + G + ++   KG 
Sbjct: 568 TELDHKDEK-VGYKIRQAQLEKVPYMLVLGEKEAAEGAITVRSRDKGD 614



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/217 (11%), Positives = 62/217 (28%), Gaps = 19/217 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R I+   G+  + TP++  S  L +     D     +++ 
Sbjct: 262 GFPFFLPKGMTLKNTLIDYWREIHYRDGYQEVSTPII-LSRKLWENSGHWDHYKDNMYTT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D +  +++          V +N                  +     G+    ++   
Sbjct: 321 VI-DEEDYAVKPMNCPGGM-LVYKNQPHSYRDLPLKVGELGLVHRHEKSGQLHGLMRVRC 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +      +        +  +          +  +   +  +E      D   ++ 
Sbjct: 379 FTQDDAHIFMRDDQIEDQIKGVTKL-------INEVYTQFGFEYFVELSTRPEDSMGSDE 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
              +            G++  L +   D   +   GA
Sbjct: 432 DWEMA---------TNGLRKALEDMGLDYIVNEGDGA 459


>gi|77360564|ref|YP_340139.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|76875475|emb|CAI86696.1| prolyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 544

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/142 (10%), Positives = 46/142 (32%), Gaps = 6/142 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   +  G        +R+  ++ + +R          +  P+++ +D L +     D  
Sbjct: 1   MIRRVASGLYTWLPTGLRVLRKVENIVREEMNKANAIEMLMPVIQPAD-LWEESGRWDEF 59

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +  +L     ++     R    ++  +      Y+I    R+E+    
Sbjct: 60  GPELMRFTDRHNRTFALGPTHEEVITDFVRKEISSYKQLP--ISLYQIQTKVRDERRPRF 117

Query: 124 RFRQFIQCDVDNVGSSAETADA 145
              +  +  + +  S   + + 
Sbjct: 118 GVMRAREFTMKDAYSFHLSDEC 139



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 3/102 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          + I  M+               Q L+ AG+   +F    +  G  
Sbjct: 433 DQYGIIWPQPIAPFDLAIVPMNMHKSHRIPDIATNLYQGLKDAGLDV-LFDDRKERPGVM 491

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
               +    P  ++ G        +++K+   G++L  +I  
Sbjct: 492 FNDMELIGVPFTLVIGERNLDENKVELKNRRTGEKLMIDIDT 533


>gi|317493988|ref|ZP_07952404.1| prolyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917761|gb|EFV39104.1| prolyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 572

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWMPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR+ GI   M     +  G  
Sbjct: 461 DERGIIWPDAIAPFQVAILPMNMHKSFRVKDLAESLYNSLRSKGIDVIMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G        ++ K+   G++   +    E +  A++ 
Sbjct: 520 FADMELIGVPHTVVIGDRNLDSDEIEYKNRRNGEKQMIKTGEIEDFLLAQIK 571


>gi|260682273|ref|YP_003213558.1| threonyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685872|ref|YP_003217005.1| threonyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260208436|emb|CBA60998.1| threonyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260211888|emb|CBE02332.1| threonyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 670

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 43/137 (31%), Gaps = 3/137 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +    F      + + ++              V I  +      +       +
Sbjct: 532 EKHRPVMIHRVAFGSIERFIGILIEHYAGKFPVWLSPTQVKILPIS--DKFMDYANEVKK 589

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L   GIR E+    ++  G +++ A     P  +I G  E +   + ++   KG+  S 
Sbjct: 590 ELFDKGIRVELD-DRAEKIGFKIREAQLEKVPYMLIVGEKEVADNNVSVRSRDKGEIGSI 648

Query: 459 EIKNNESWREARVAQIT 475
           ++    +     +    
Sbjct: 649 KLDEFIASISKEIESRE 665



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E   GF     K + ++N +L   R I+   G+  IE+P++  +  L +        
Sbjct: 285 MIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPII-LNRKLWETSGHWYHY 343

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
            + +++++  D +  +++      
Sbjct: 344 KENMYTVKI-DDEDYAIKPMNCPG 366


>gi|170768387|ref|ZP_02902840.1| prolyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170122491|gb|EDS91422.1| prolyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 572

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDFL 566


>gi|288940948|ref|YP_003443188.1| prolyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896320|gb|ADC62156.1| prolyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 572

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 36/106 (33%), Gaps = 4/106 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  R+   +R   +  G   +  P ++ ++ L +     ++    
Sbjct: 34  KLAAGLYTWLPLGLRVLRRVERIVREEMDRAGALEVSMPAVQPAE-LWQESGRWEQYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +   +D   +         ++   LAR   +++  +       +  
Sbjct: 93  LLRFKDRHQREFCFGPTHEEIITELARNELKSYKQLPINFYQIQTK 138



 Score = 43.7 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 40/161 (24%), Gaps = 25/161 (15%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL--SK 392
           DG  +             +  + +                   V +  M           
Sbjct: 433 DGKATVMTMGCYGIGVSRVVAAAIEQHHDERGICWPAPIAPFEVALLPMKLGKSYRVREA 492

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGERSRGMLQIKDL 450
            +     L+ AGI   +    ++       +AD      P  I+ G      G ++ K  
Sbjct: 493 TEKLYAELQAAGIDVLLDDRDARP---GFMFADMELIGIPHRIVVGDKGLDDGQVEYK-- 547

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                             A      IPI  +V  V++ L+ 
Sbjct: 548 ----------------GRADAEMQLIPIDTIVEFVRERLRA 572


>gi|15895629|ref|NP_348978.1| threonyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|22654130|sp|Q97GK4|SYT_CLOAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15025373|gb|AAK80318.1|AE007736_8 Threonyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325509777|gb|ADZ21413.1| threonyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 637

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+     +      ++ L+ AGIR E  +  ++  G +++ A  +  P  I
Sbjct: 534 WLAPVQVKVMNITDSQVEYVDAISEKLKEAGIRVEKDV-RNEKIGYKIREAQLKKVPYMI 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G  E   G++ ++   +G   S  I++      A V + 
Sbjct: 593 VIGDKEIKEGIISVRSRKEGDLGSMNIEDFIFRINAEVKEK 633



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +L+  R +++  G+D I TP++  +++L       D   + ++  
Sbjct: 261 GFPFFHPKGMVLKNLLLNYWREVHDKAGYDEISTPII-LNEALWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 319 TKIDEADYAIKPMNCPG 335


>gi|312898595|ref|ZP_07757985.1| threonyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620514|gb|EFQ04084.1| threonyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 635

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 45/131 (34%), Gaps = 3/131 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   V    F      + + ++    +         V I  +      +       +
Sbjct: 501 QKHRPVMVHRACFGSIERFIGILIEHYAGAFPVWLAPTQVKILPIS--EKQMDYAVELRK 558

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
             + AGIR E+   S++  G +++ A     P   + G  E     + ++D ++G   SR
Sbjct: 559 KFKKAGIRVELD-ESNEKIGYKIRKAQMEKVPYMCVIGEKEVQEQTVSVRDRSQGDLGSR 617

Query: 459 EIKNNESWREA 469
            +    +  + 
Sbjct: 618 NVDEFIAHIQE 628



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +R  +L     +++ Y +D I TP++  +  L +     D   + ++  
Sbjct: 261 GFPFFHPKGMLLRQTLLKFWNELHDRYEYDQISTPII-LNRQLWEQSGHWDHYRENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 TTIDDEPYAIKPMNCPG 335


>gi|296454700|ref|YP_003661843.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184131|gb|ADH01013.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 604

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 34/110 (30%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +  ++     V +     D+ +    +     L   G+          + G + K
Sbjct: 492 DEAGLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFK 551

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    PL  + G    + G ++I+D     +++            R A
Sbjct: 552 DAELIGVPLIAVVGRDYVNDGTIEIRDRNGENKVAVPAAEAAGTLADRFA 601



 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +R+ N+I   IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 47  WLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 102

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 103 DRHEADYLLAP 113


>gi|88798124|ref|ZP_01113711.1| prolyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88779321|gb|EAR10509.1| prolyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 573

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 42/157 (26%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G  +      R+ N+I   IR   +  G   +  P ++ ++ L +     D+    
Sbjct: 34  KLASGLYNWLPTGRRVLNKIETIIREELDRSGAQEVLMPTIQPAE-LWEESGRIDKMEGQ 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGP 122
           +  +QD   +         ++   +AR    ++  +       +                
Sbjct: 93  MLKMQDRHQRDFVYGPTHEEVITDIARNELTSYKQLPMNFYQIQNKFRDEFRPRFGVMRS 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F                     M        + +G
Sbjct: 153 REFVMKDGYSFHVDQECLNKEYDNMYQAYCRIFDRLG 189



 Score = 41.4 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/113 (10%), Positives = 33/113 (29%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGN 419
                   +      V I  ++     + +   +     L+ AG    +     K + G 
Sbjct: 461 DENGIIWPDAIAPFHVGIVPLNAHKSPEVMEVAEKLYADLQAAGYDVLLDDRDKKTSPGV 520

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +    +    P  I+      + G ++ K      +    + +  +  + + A
Sbjct: 521 KFADMELVGVPHRIVVSDRGLADGKVEYKARRASDKEEIALTDILAHIQQQSA 573


>gi|148887021|sp|Q0VRL1|SYP_ALCBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 572

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   IR   +  G   +  P+++  + L +        
Sbjct: 31  MVRKLASGLYTWLPSGLRVLRKVEQVIREEMDRAGAQEVLMPVVQPME-LWEESGRAPAY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D       L  
Sbjct: 90  GPELLRITDRHNNPFCLGP 108



 Score = 40.2 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 7/132 (5%)

Query: 346 VPATGFSIGISRLIVALKSLESSTN---NIKEMGPVLITTMDHDSDS----LSKYQMYTQ 398
           +P   + IG++R++ A     +        + + P  +  +  +           +    
Sbjct: 437 MPMGCYGIGVTRVVAAAIEQNNDDRGIIWPEAIAPFQVALVPVNIKKSPRERELAEKLYA 496

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L   GI         +  G +L   +    P  I+        G+L+ K      +   
Sbjct: 497 ELTAMGIEVLFDDREKERLGVKLADTELLGIPHRIVIAERGMDNGVLEYKGRRDADKTEV 556

Query: 459 EIKNNESWREAR 470
            +    ++ + +
Sbjct: 557 AMDEIVAFLKEK 568


>gi|323964912|gb|EGB60378.1| prolyl-tRNA synthetase [Escherichia coli M863]
 gi|327255174|gb|EGE66777.1| prolyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 572

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQIK 571


>gi|315655105|ref|ZP_07908007.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490586|gb|EFU80209.1| proline--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 623

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 43/128 (33%), Gaps = 7/128 (5%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +     D +  +  +     L  AG++         + G + K
Sbjct: 488 DDKGLIWPLNIAPFQVHVLATGKDPEIFATAEKLACQLDAAGLQVLYDDRPKASAGVKFK 547

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKG-KELSREIKNNESWREARVAQ-----ITI 476
            A+    P A++ G G  + G ++I+   +G  + +      E   +A   +      ++
Sbjct: 548 DAELLGMPYALVVGKG-LAEGKIEIRQRREGTTQETTPESCVEELLQAIENEAAKTAFSL 606

Query: 477 PISELVST 484
             +EL+  
Sbjct: 607 TSTELIGE 614



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        ++   R+ + +R   +  G   ++ P+L  S+         +     +F L
Sbjct: 40  GIYTWLPLGLKTLRRVENIVREEMDRIGGQELQFPMLLSSEPYVATN-RWEEFGPSLFKL 98

Query: 74  QDDDGQWISLRY 85
           +D       L  
Sbjct: 99  KDRKEGDYLLAP 110


>gi|293394735|ref|ZP_06639027.1| proline-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291422861|gb|EFE96098.1| proline-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 572

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N     +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNANAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR+ GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFHVAILPMNMHKSFRVQELAEKLYAELRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P +I+ G        ++ K+   G++   +  +   +  A++ 
Sbjct: 520 FADMELIGVPHSIVIGDRNLDSDEIEYKNRRVGEKQMIKTGDIVEYLLAQIQ 571


>gi|257875532|ref|ZP_05655185.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257809698|gb|EEV38518.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 646

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 51/442 (11%), Positives = 115/442 (26%), Gaps = 81/442 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+  + TP++   D   K     D  ++ +F  
Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMANVDLY-KTSGHWDHYHEDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+ + LR             +         +YR  P+   E              
Sbjct: 321 MDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------- 360

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL           I    ++ LD +   IG++ D  + +
Sbjct: 361 GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLM---IGVYEDFNITD 417

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               L   D  +K           +   D++        L +   ++ + +   + E + 
Sbjct: 418 YRFRLSYRDPQNK----------DKYFDDDAMWENAQTMLKAAMDELELDYFEAEGEAAF 467

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
           +     V+   A         +  + +    ++   +                +   +  
Sbjct: 468 YGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMER 527

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F     +     F +                 ++                + L+      
Sbjct: 528 FVAYLTEVYKGAFPTWLA----------PIQASIIPVSVEAHSDYAYEIKERLQ------ 571

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                                    Q LR      E+    ++  G +++ +  +  P  
Sbjct: 572 ------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKIPYQ 601

Query: 433 IIQGTGERSRGMLQIKDLAKGK 454
           I+ G  E +   + I+     +
Sbjct: 602 IVVGDQEVNDATVNIRRYGSKE 623


>gi|57234857|ref|YP_181114.1| prolyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|114152187|sp|Q3Z9I5|SYP_DEHE1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57225305|gb|AAW40362.1| prolyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 569

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/380 (12%), Positives = 102/380 (26%), Gaps = 22/380 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           + A+L  G         R   +I + IR      G   +  P+L+  +   +    E   
Sbjct: 31  MIAQLTAGVYSFMPLAWRSIQKIENIIRQEMNKSGCQELAMPVLQPVEIWQQS-GREAPF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEK 119
            + +F L+D   + + L     ++   LA    +++  +       +      P  R   
Sbjct: 90  GQTLFHLKDRKDRNLVLGPTHEEVITDLASRYIQSYRDLPQRLYQIQTKFRDEPRPRGGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN--DYHIGINNRKILDG 177
                F        D      + +   M     +     G++    D   G    K    
Sbjct: 150 IRVREFIMKDMYSFDASPEGLDESYQTMKQAYENVYRRCGLESMVIDADSGAIGGKASHE 209

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            +       D  +        A  +   F  + +     E   D     T G    SE  
Sbjct: 210 FMIVAESGEDSIIYCPKCNYAANAEKAVFKKKTLPK---EPPKDLEEVATPGQKTISEVA 266

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
               +FLS+  E ++  ++ +  G         +L +    ++     ++      + V+
Sbjct: 267 ----AFLSLKPENTLKAVFYMADGKFVMAVIRGDLDINEIKLKNLLKCNDLRLAEDSEVK 322

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
                 G      L   +           +   G   DG             G      +
Sbjct: 323 AAGIAAGFASPVGLKNSLTVADDSVENGSNFVAGANKDGF-----HLKNVNFGRDFKADK 377

Query: 358 LIVALKSLESSTNNIKEMGP 377
           +     + E +     +   
Sbjct: 378 MADIALAAEGAACPFCDGTF 397



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/198 (8%), Positives = 47/198 (23%), Gaps = 13/198 (6%)

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
            ++   +  +        +        C +           +   +         R+   
Sbjct: 363 HLKNVNFGRDFKADKMADIALAAEGAACPFCDGTFASKRGVEVGHIFKLGTFLSERFGAN 422

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLES--------STNNIKEMGPVLITTMDHDSDS 389
            +  +G + P      G+    +   ++E             I      +      +   
Sbjct: 423 FTDAEGISHPIIMGCYGMGVGRLLAAAIEQNHDEKGIIWPMPIAPYQIYICGLFLDNPAV 482

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNF--GNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
               +     L   G+         +    G +   AD    PL +        +G +++
Sbjct: 483 SQAAEKIYTELEAQGVEVLFD---DRELTAGVKFNDADLLGIPLRLTISPRNLDKGGVEL 539

Query: 448 KDLAKGKELSREIKNNES 465
           K     +     +++   
Sbjct: 540 KLRRNKESELVPLESIME 557


>gi|171578|gb|AAA34636.1| GCN2 [Saccharomyces cerevisiae]
          Length = 1590

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/428 (13%), Positives = 124/428 (28%), Gaps = 56/428 (13%)

Query: 15   FADCP---------TKEIRIRNRILDSIRNIYENYGFDPIETP--LLEYSDSLGKFLPDE 63
              D                +R+++ + +  I+  +G      P  +   +   G      
Sbjct: 951  TNDILFDNSVPTSTPFANILRSQMTEEVVKIFRKHGGIENNAPPRIFPKAPIYG------ 1004

Query: 64   DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY--RIGPVFRNEKHG 121
                + V+ + D  G  + L+YDLT P+ARY+++N   I    R       P        
Sbjct: 1005 ---TQNVYEVLDKGGTVLQLQYDLTYPMARYLSKNPSLISKQYRMQHVYRPPDHSRSSLE 1061

Query: 122  PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            P +F +     +    S +   DAE   ++ + L    +        I N   +  +   
Sbjct: 1062 PRKFGEIDFDIISKSSSESGFYDAESLKIIDEILTVFPVFEKTNTFFILNHADI--LESV 1119

Query: 182  IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                  DK    L+             + VK  L               N++S  ++ + 
Sbjct: 1120 FNFTNIDKAQRPLVSRMLSQVGFARSFKEVKNELK-----------AQLNISSTALNDLE 1168

Query: 242  SF-LSIDLEKSMHELYELVKGTIAGEKGFN---ELVVISELVRKSGYNSNRIKISSTIVR 297
             F   +D E +   LY+L+  +   +K  +    +  +   ++      N +    +   
Sbjct: 1169 LFDFRLDFEAAKKRLYKLMIDSPHLKKIEDSLSHISKVLSYLKPLEVARNVVISPLSNYN 1228

Query: 298  GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
               Y  G ++ A+      +                +     +       A GF++    
Sbjct: 1229 SAFYKGGIMFHAVY-DDGSSRNMIAAGGRYDTLISFFARPSGKKSSNTRKAVGFNLAWET 1287

Query: 358  LIVALKS---------------LESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLR 401
            +    ++                   T    +     +      +  L          L 
Sbjct: 1288 IFGIAQNYFKLASGNRIKKRNRFLKDTAVDWKPSRCDVLISSFSNSLLDTIGVTILNTLW 1347

Query: 402  TAGIRAEM 409
               I+A+M
Sbjct: 1348 KQNIKADM 1355


>gi|170740864|ref|YP_001769519.1| ATP phosphoribosyltransferase regulatory subunit [Methylobacterium
           sp. 4-46]
 gi|168195138|gb|ACA17085.1| tRNA synthetase class II (G H P and S) [Methylobacterium sp. 4-46]
          Length = 378

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 70/381 (18%), Positives = 134/381 (35%), Gaps = 66/381 (17%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           + +  ++E  G+  +E P+L+  +   +   ++ R  + +F  QD+ G  + LR + T P
Sbjct: 15  ERLLALFEGRGYARVEPPVLQPVEPFLELSGEDIR--RRIFITQDEAGAELCLRPEYTIP 72

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
           + R+                +GPVFR     P  F Q     +  V   A  ADAE+  +
Sbjct: 73  VGRH--HRAVAGAEAADYSYLGPVFRLRAGEPNEFHQAGIESIGRVDVPA--ADAEILGL 128

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL--RAIDK------ 202
             + LE +G    +  + + +  ++  +L+ +G+    K      +   R++D+      
Sbjct: 129 AVEGLERLG--HGEPRVRLGDMGLITALLDALGVAPAAKRRCLRAIAAGRSLDEIAAPVP 186

Query: 203 -----------LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-------- 243
                      +     QGV+  + +           G +   E  +  ++         
Sbjct: 187 VGEAHAGLLSAIQGQDPQGVRAFVEDVLAIAGISRVGGRS-AGEIAERFLAKAAAHAGGG 245

Query: 244 ----------------LSIDLEKSMHELYELVK----GTIAGEKGFNELVVISELVRKSG 283
                           L+ D +++   L +LV        +  +        +  +  SG
Sbjct: 246 AGLGGEARAVIEGYLALTGDPDRAAAGLRDLVASAGLSAPSLREAVALFEERNGFIAASG 305

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
              +R   S    R L+YYTG ++E  +          P     V GGGRYDGL+     
Sbjct: 306 LPLDRFTFSGRFARNLDYYTGFIFEITV----------PEGERPVVGGGRYDGLLQHLGS 355

Query: 344 QNVPATGFSIGISRLIVALKS 364
                          + A +S
Sbjct: 356 PEPLPAVGCSFWLDRLSARES 376


>gi|110833600|ref|YP_692459.1| prolyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110646711|emb|CAL16187.1| Prolyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 566

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   IR   +  G   +  P+++  + L +        
Sbjct: 25  MVRKLASGLYTWLPSGLRVLRKVEQVIREEMDRAGAQEVLMPVVQPME-LWEESGRAPAY 83

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D       L  
Sbjct: 84  GPELLRITDRHNNPFCLGP 102



 Score = 40.2 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 7/132 (5%)

Query: 346 VPATGFSIGISRLIVALKSLESSTN---NIKEMGPVLITTMDHDSDS----LSKYQMYTQ 398
           +P   + IG++R++ A     +        + + P  +  +  +           +    
Sbjct: 431 MPMGCYGIGVTRVVAAAIEQNNDDRGIIWPEAIAPFQVALVPVNIKKSPRERELAEKLYA 490

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L   GI         +  G +L   +    P  I+        G+L+ K      +   
Sbjct: 491 ELTAMGIEVLFDDREKERLGVKLADTELLGIPHRIVIAERGMDNGVLEYKGRRDADKTEV 550

Query: 459 EIKNNESWREAR 470
            +    ++ + +
Sbjct: 551 AMDEIVAFLKEK 562


>gi|311280836|ref|YP_003943067.1| prolyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308750031|gb|ADO49783.1| prolyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 572

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 26/107 (24%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  ++ G        ++ K    G +   +  +   + 
Sbjct: 520 FADMELIGIPHTVVIGDRNLDNDDIEYKYRRNGDKQLIKTGDILDYL 566


>gi|254560617|ref|YP_003067712.1| histidyl-tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254267895|emb|CAX23761.1| putative histidyl-tRNA synthetase (hisS) [Methylobacterium
           extorquens DM4]
          Length = 392

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 62/388 (15%), Positives = 123/388 (31%), Gaps = 69/388 (17%)

Query: 20  TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
                    +   +   +   G+ P   P+L+  +   +   ++ R  + +F  QD +G 
Sbjct: 9   PSGAEALRHV--RLSAHFSACGYVPASPPVLQPVEPFLELSGEDIR--RRIFVTQDANGA 64

Query: 80  WISLRYDLTAPLARYVAENFDTIVFP-CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
            + LR + T P+ R    +  T          +GPVFR     P  F Q     +    +
Sbjct: 65  ELCLRPEFTIPVCRL---HQATRPGESADYSYLGPVFRLVAGEPDEFVQGGIESIGRTDT 121

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH--GDDKLNERLIV 196
            A  A+     +         + R+D  + + +  +    L+ + +      +    +  
Sbjct: 122 PAADAEVLGLALE----GLALLGRSDVTVRLGDMGLTHAFLDALHVPPVAKRRTLRAIAA 177

Query: 197 LRAIDKLDKFGLQG-----------------VKLLLGE---------------------G 218
            R++D++                        V+  + +                      
Sbjct: 178 GRSLDEVANSVQAEDRHAGLLAAIQGQDAGAVRAFVEDVLSIAGISQVGGRSAGAIAERF 237

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG------EKGFNEL 272
               S     GA L +   +++  + +I  +              AG      E      
Sbjct: 238 LAKASAQAHGGAGLNATNRELIERYCAISGDPDAAVAAVRALAREAGLTHDGLEAALALF 297

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +  +   G    R + +    R L+YYTG ++E             P    ++ GGG
Sbjct: 298 EERTGFMAARGLPVERFRFNGGFARNLDYYTGFIFEVT----------GPQGGPTLVGGG 347

Query: 333 RYDGLVSR-FKGQNVPATGFSIGISRLI 359
           RYDGL+ +      +PA G +  +SR  
Sbjct: 348 RYDGLLQQLGSPVPLPAVGCAFWLSRCA 375


>gi|308235415|ref|ZP_07666152.1| prolyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114822|ref|YP_003986043.1| proline--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946316|gb|ADP39020.1| proline--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 602

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D  +    +   + L   GI          + G + K
Sbjct: 490 DDAGLAWPMAIAPAQVHVVATGKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFK 549

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            A+    PL  + G    + G ++I+D       +  +    +    RV + 
Sbjct: 550 DAELVGVPLIAVAGRDTVNNGTIEIRDRNGSNVEAIPVDEAAARIVERVREQ 601



 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 8/88 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLG 57
           M +   +R   P G        +++ N++   IR      G   +  P L   E  ++  
Sbjct: 24  MQRAGYIRKSAP-GVWTWLPLGLKVLNKVQAIIREEINGIGAQEVHFPALLPREPYEATN 82

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRY 85
           ++    D     +F L+D       L  
Sbjct: 83  RWEEYGDN----IFRLKDRHEADYLLAP 106


>gi|254360942|ref|ZP_04977088.1| proline--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261492183|ref|ZP_05988753.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494250|ref|ZP_05990749.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153092421|gb|EDN73484.1| proline--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261310102|gb|EEY11306.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312163|gb|EEY13296.1| proline--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 571

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 47/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L    
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWVES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              +     +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWNDYGPELLRFKDRGERDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFVMKDAYSFHTTQESLQETYDVMYQVYSNIFTRLG 189



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 33/108 (30%), Gaps = 3/108 (2%)

Query: 367 SSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
               +      V I  M+        +  +     L+  G+         +  G      
Sbjct: 464 IWPCDEMAPFTVAIVPMNMHKSEKVQAFAEELYANLKAQGVEVIFDDRKER-PGVMFADM 522

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +    P  ++ G      G ++ K+   G++     ++  ++ +A V 
Sbjct: 523 ELIGVPHMVVIGEKNLENGEIEYKNRRSGEKQMIAKESLLAFLKANVK 570


>gi|108799043|ref|YP_639240.1| prolyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119868158|ref|YP_938110.1| prolyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126434646|ref|YP_001070337.1| prolyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|122977105|sp|Q1BAA0|SYP_MYCSS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152112933|sp|A1UER2|SYP_MYCSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|108769462|gb|ABG08184.1| prolyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119694247|gb|ABL91320.1| prolyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126234446|gb|ABN97846.1| prolyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 584

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 35/107 (32%), Gaps = 2/107 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +   + D  + +        L   G+   +      + G + K
Sbjct: 477 DELGLRWPAAVAPFDVHVVIANKDDGARTGATELAGELDRLGLEVLLD-DRKSSPGVKFK 535

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            A+    P  ++ G      G+++++D   G++    + +  +   A
Sbjct: 536 DAELLGVPWIVVVG-RGWGDGVVELRDRFSGEKREIGVDDAATEILA 581



 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+  +I   +R+     G   I  P L      ++  ++    D     +
Sbjct: 40  GLYTWLPLGLRVFRKIEQIVRDEMTAIGGQEILFPALLPRAPYETTNRWTEYGDT----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D       L  
Sbjct: 96  FRLKDRRDNDYLLGP 110


>gi|297562530|ref|YP_003681504.1| prolyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846978|gb|ADH68998.1| prolyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 582

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 30/103 (29%), Gaps = 2/103 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +       + + +     + L   G+R  +      + G +  
Sbjct: 474 DDKGVVWPREVAPADVHVVGTGKG-EQIEEALRIARELEARGLRVLVDDRKGVSPGVKFT 532

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+    P  +I G      G+++++D A G      +     
Sbjct: 533 DAELLGVPTGVIVG-RGLKDGLVELRDRATGDREEVALAEIVD 574



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G          +   +   +R   +  G   +  P L   EY ++ G++    D     +
Sbjct: 40  GVYTWLPLGKIVLENVARIVREEMDAIGAQEVLLPALLPREYYEATGRWEEYGDT----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 96  FRLKDRKGADYLLGP 110


>gi|229175285|ref|ZP_04302800.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608117|gb|EEK65424.1| Threonyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 645

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/449 (11%), Positives = 111/449 (24%), Gaps = 85/449 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L                       
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVL----------------------- 303

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                + +                                   N           +  + 
Sbjct: 304 ---GSREL----------------------------YETSGHWNHYRDGMFPSMEMDNEE 332

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  +      +R  + G L  +         +R
Sbjct: 333 LVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTM--HRYEMSGALSGL---------QR 381

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSM 252
           +  +   D         +K  L          +    +   E     +S+    D +K  
Sbjct: 382 VRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY---KDFGLENYSFRLSYRDPADTKKYY 438

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    +     G  +         VR        +    L 
Sbjct: 439 ADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLD 496

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    +   V               + +   +     S     +   ++  + +    
Sbjct: 497 FLLPERFELSYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTW 546

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  +  +      L   +     LR AGIR E+     K  G +++ A  +  P  
Sbjct: 547 LAPVQAQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREAQMQKIPYM 604

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  E +   + ++    G++ S  I 
Sbjct: 605 LVVGDNEVTENGVNVR--KYGEQKSETIA 631


>gi|139437031|ref|ZP_01771191.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC
           25986]
 gi|133776678|gb|EBA40498.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC
           25986]
          Length = 611

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R E P GF       + ++N +LD  R I+   G+  I TPL+     L K     D  
Sbjct: 232 MRDEAP-GFPFFLPNGMILKNTLLDYWREIHHKAGYVEISTPLIMNKQ-LWKTSGHWDHY 289

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV 103
              ++S    D +   ++           A    +  
Sbjct: 290 KDNMYSTVI-DDEEYCIKPMNCPGGVLVYASKPHSYR 325



 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 79/279 (28%), Gaps = 25/279 (8%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F +   LT E + ++    S+  +       EL            +     E
Sbjct: 355 FNQDDAHLFVRPDQLTDEIVGVVNLIDSVYQKFGFKYHVELSTRPEDSMGSDEDWARAEE 414

Query: 278 LVR-KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-D 335
            +R          +++               E  LG        +      +     Y D
Sbjct: 415 GLRTALEQLHMDYEVNEGDGAFYGPKIDFHLEDSLGRTWQCGTVQLDFQMPLNFDLEYVD 474

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
              ++ +   +    F      + + ++           + PV +  +     S      
Sbjct: 475 ADGTKKRPIMLHRVCFGSIERFIGILIEHFAGKFPTW--LAPVQVKALPVSEKSRDYAHE 532

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN-CPLAIIQGTGERSRGMLQIKDLAKGK 454
               L  AGIR        +  G +++ A   +  P  +I G  E   G + ++D     
Sbjct: 533 VCAKLEEAGIRVVCD-DRDEKIGYKIREARSIDRVPYMLILGEKEVEAGNISVRD----- 586

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                       R     Q+++   E V+ V + ++   
Sbjct: 587 ------------RSNETVQMSV--DEFVAKVLEEIKTRA 611


>gi|330959255|gb|EGH59515.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 571

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INLYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|325661884|ref|ZP_08150505.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471862|gb|EGC75079.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 643

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 1/103 (0%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +                L+ A IR  +    S+  G +++ A     P  ++ G  
Sbjct: 538 QVKVLPISEKYHEYANEVAAKLKEAKIRCSVD-ERSEKIGYKIRDARLNKIPYMLVVGAK 596

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           E+  G++ ++    G E  R +    +     +   TI   EL
Sbjct: 597 EQEEGVVSVRSRFLGDEGQRSLDTFIAEITEEIKNRTIRKVEL 639



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R ++   G+  I TP++  +  L +         + +++ 
Sbjct: 260 GFPIFLPKGMILKNTLIDYWREVHTRAGYVEISTPIM-LNRQLWETSGHWAHYKENMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 VI-DEEDFAIKPMNCPG 334


>gi|296127837|ref|YP_003635089.1| threonyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296019653|gb|ADG72890.1| threonyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 643

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 76/257 (29%), Gaps = 4/257 (1%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     L  E I+ +  +LS+  +         V    A   G +E+  ++    
Sbjct: 379 DDAHIFCTEEQLGDEIINTIEYYLSVYKDFGFENFEIFVSTRPAKSIGSDEIWELATKSL 438

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD---GL 337
            +  +   IK       G  Y     +          +     V  S+            
Sbjct: 439 INALDKLGIKYKINEGDGAFYGPKIDFNIKDVLDRNWQCGTLQVDFSLPMRFEISYEGKD 498

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             +     +           + + ++              V +  +  +   + +     
Sbjct: 499 GRKHTPVMLHRAILGSMERFIGILVEHYNGKFPLWLSPLQVAVVNVLDEKSQIDRVNEVA 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L+ AG R E     ++N G ++K    +  P  +I G  E S G L I+  +  +   
Sbjct: 559 KALKDAGFRVETD-EGNENLGTKIKKYRLQRTPYTVIIGAEEVSNGKLSIRTRSSQEIKD 617

Query: 458 REIKNNESWREARVAQI 474
            ++       +    + 
Sbjct: 618 MDLNEFIEKLKKESKER 634



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     + + I   +   IRN  +  G+  I+TP +   +   +     D   + ++  
Sbjct: 259 GFPFWHPRGMVIYKAVESYIRNENDKRGYVEIKTPAILNEELWHRS-GHWDNYKENMY-F 316

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 317 TEIDETKYAVKPMNCPG 333


>gi|116512847|ref|YP_811754.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus
           lactis subsp. cremoris SK11]
 gi|122939966|sp|Q02WN1|SYT_LACLS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116108501|gb|ABJ73641.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 646

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/459 (10%), Positives = 102/459 (22%), Gaps = 80/459 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A        IR  I   + +     G+  + TP                         
Sbjct: 262 GTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITP------------------------- 296

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                V  N +T                       +      D 
Sbjct: 297 ---------------------VMMNLNTYKQSGHWQHY---------HEDMYPPMDMGDG 326

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           + +        + + +          +       G+ +R    G L  +    +      
Sbjct: 327 EEMELRPMNCPSHIAIYKHHVHSYRELPIRIAEFGMMHRYEKSGALSGLQRVRE------ 380

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   D      L+ V+    +       D  +   +       +      D  K   
Sbjct: 381 ---MTLNDGHTFVMLEQVQEEFSK-ILQLIMDMYRDFGINDYSF-RLSYRDPKDTVKYFP 435

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +     K     +   +++    + V   G  +         V+        +    L F
Sbjct: 436 DDEMWEKSQAMLKATMDDMK--LDYVEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDF 493

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                               Y G         +   G    + R I  L  +        
Sbjct: 494 LNPENFDI-----------SYVGADGEKHRPVMIHRGVISTLERFIAYLIEVYKGAFPTW 542

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                      ++           + L+  G R  +   +++  G +++ +     P  I
Sbjct: 543 LAPTQATIIPVNNEIHADYAWKIQRELQDKGFRVVVD-EANEKMGWKIRQSQTHKIPYQI 601

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E++ G + I+     +      ++      A VA
Sbjct: 602 VIGDQEQANGTVNIRRYGSKETEVIPFEDFIEKISADVA 640


>gi|218547650|ref|YP_002381441.1| prolyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226701288|sp|B7LW79|SYP_ESCF3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218355191|emb|CAQ87798.1| prolyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|323975637|gb|EGB70733.1| prolyl-tRNA synthetase [Escherichia coli TW10509]
          Length = 572

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQIK 571


>gi|15618715|ref|NP_225001.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836339|ref|NP_300863.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752234|ref|NP_445602.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242166|ref|NP_877107.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|8928382|sp|Q9Z7A0|SYT_CHLPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|4377117|gb|AAD18944.1| Threonyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189978|gb|AAF38837.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8979180|dbj|BAA99014.1| threonyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33236677|gb|AAP98764.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 635

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 58/192 (30%), Gaps = 10/192 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + + + ++   + ++   G+  I TP L     L +     D     +++L
Sbjct: 256 GMPFFHPRGMIVWDALIRYWKQLHTAAGYKEILTPQLMNRQ-LWEVSGHWDNYKANMYTL 314

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q  D +  +++         Y      +              R  + G    ++      
Sbjct: 315 QI-DDEDYAIKPMNCPGCMLYYKTRLHS--------YKEFPLRVAEVGHVHRQEASGALS 365

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +   A   D     +  + +E   +        +     L+  LE       D + + 
Sbjct: 366 GLMRVRAFHQDDAHVFLTPEQVEEETLNILQLVSTLYGTFGLEYHLELSTRPEKDTIGDD 425

Query: 194 LIVLRAIDKLDK 205
            +   A D L++
Sbjct: 426 SLWELATDALNR 437



 Score = 40.2 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 35/102 (34%), Gaps = 3/102 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      L + +++ +           V I T+      + + +   +  +  G+ 
Sbjct: 505 HRALFGSIERFLGILIENFKGRFPLWLSPEQVRIITVA--DRHIPRAKELEEAWKRLGLV 562

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             +   SS++   +++ A        I  G  E +  +L ++
Sbjct: 563 VTLD-DSSESVSKKIRNAQNMQVNYMITLGDHEINENVLAVR 603


>gi|320540052|ref|ZP_08039708.1| prolyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320029901|gb|EFW11924.1| prolyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 570

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N     +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNANAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGDRPFVLGP 108



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM--YTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       +         LR+ GI   +     +  G  
Sbjct: 459 DERGIIWPDTIAPFQVAILPMNMHKSFRVQALAEDLYTTLRSHGIDVLLDDRKER-PGVM 517

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K+   G++   + +   ++   ++ 
Sbjct: 518 FADMELIGVPHTIVIGDRNLDSEEIEYKNRRIGEKQMIKTEEIVNFLLRQIK 569


>gi|242242546|ref|ZP_04796991.1| prolyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233973|gb|EES36285.1| prolyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 567

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 67/545 (12%), Positives = 152/545 (27%), Gaps = 83/545 (15%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   IR   E+     I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNISKIIREEMESIDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG------- 112
                  +  L+D +G+  +L     ++   L R   +++  +       +         
Sbjct: 86  WSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRDELKSYKQLPLTLFQIQSKYRDEKRP 145

Query: 113 ----------------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---- 152
                               +E      ++   Q            A   +    A    
Sbjct: 146 RFGLLRGREFLMKDAYSFHSDEASLDATYQDMYQAYSRIFKRVGINARPVVADSGAIGGS 205

Query: 153 --DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI---------- 200
                 A+     D  +  N       I +   ++     +  L  L  +          
Sbjct: 206 HTHEFMALSEIGEDTIVYSNESDYAANIEKAEVVYHPSHKHSELAELTKVETPNVKTAQE 265

Query: 201 --DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELY 256
             D L++   + VK ++ +   +      +G +  +E    + ++   +  +     E+ 
Sbjct: 266 VADYLERPLDEIVKTMIFKIDGEFIMLLVRGHHELNEV--KLKAYFGTEHVEMATQDEIV 323

Query: 257 ELVKGTI--------AGEKGFNELVVISELVRKSGYNSNRIKISSTIV-RGLEYYTGCVY 307
            LV               K + +  +        G N +     +  + R  +      +
Sbjct: 324 NLVDANPGSIGPIFEKDIKIYADNYLQDLNNFVVGANEDHYHYINVNIGRDFDVTEYGDF 383

Query: 308 EAILGFPVMNEKQKPVVFGS-------VGGGGRYDGLVSRFKGQNVP------ATGFSIG 354
             I    ++++      F            G +Y   ++     N           + IG
Sbjct: 384 RFITQGEMLSDGSGVAQFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIG 443

Query: 355 ISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           +SR + A+    +         ++      LIT      D  +      Q L       +
Sbjct: 444 VSRTLSAIVEQNNDENGIIWPKSVTPFDIHLITINPKKEDQRTLGDQLYQKLMD---SYD 500

Query: 409 MFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           +     K   G +   +D    P+ ++ G      G++++K    G     +I   E++ 
Sbjct: 501 ILYDDRKERAGVKFNDSDLIGLPVRVVVGKR-AEEGIVEVKQRFNGLSEEVQIDELETYL 559

Query: 468 EARVA 472
           +    
Sbjct: 560 QDLFK 564


>gi|182684576|ref|YP_001836323.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|182629910|gb|ACB90858.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 660

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 97/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +V   +     P+   E +         Q D+       +  +  +  M  
Sbjct: 292 RYIV--NKELVSGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 349

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 350 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 409

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 410 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 467

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 468 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 514

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 515 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 574

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 575 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 631

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 632 GQKETQTVSVDNFVQAILADIA 653



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 275 GLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 333

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 334 MDMGDGEEFVLRPMNCP 350


>gi|15459130|gb|AAL00276.1| Threonyl-tRNA synthetase 1 [Streptococcus pneumoniae R6]
          Length = 660

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 97/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +V   +     P+   E +         Q D+       +  +  +  M  
Sbjct: 292 RYIV--NKELVSGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 349

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 350 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 409

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 410 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 467

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 468 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 514

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 515 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 574

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 575 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 631

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 632 GQKETQTVSVDNFVQAILADIA 653



 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 275 GLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 333

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 334 MDMGDGEEFVLRPMNCP 350


>gi|146295842|ref|YP_001179613.1| prolyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166980111|sp|A4XHN7|SYP_CALS8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145409418|gb|ABP66422.1| prolyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 572

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/272 (9%), Positives = 69/272 (25%), Gaps = 13/272 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         R+  +I + +R   +  G   +    L   + L +  
Sbjct: 26  MLRSGFMR-QLSSGIYVYLPLGYRVLRKIENIVREEMDRAGAQEVHMSALMPKE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
                    +F ++D + +   L     +    + R    ++  +       +       
Sbjct: 84  GRWAVFGPEMFKIKDRNEREYCLGPTHEEAFTYIVRNEVTSYRDLPKILYQIQTKFRDER 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      F        D      + +  +M        +  G+             
Sbjct: 144 RPRFGVMRCREFTMKDAYSFDMNEEGLDISYKKMYDAYVRIFKRCGLDVKIVEADTGAMG 203

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
             +    +  +       E           +    + +   +               N+ 
Sbjct: 204 GSNS--HEFMVPSSVGEAEIAYCKACGYAANLEKAECLDEPVENTEEIKQMQEVYTPNVR 261

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
              I+ +V+FL+ID ++ +  +          
Sbjct: 262 --TIEELVNFLNIDAKRFVKTMIYRADDKFVA 291



 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 11/108 (10%), Positives = 36/108 (33%), Gaps = 2/108 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +     +++     D           + L+  G+   +     +  G + K AD 
Sbjct: 461 IWPITVAPYEVIVVPVNIKDEQQSKIAFEIYEDLQKKGVEVLIDDRDERA-GVKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P  +  G    + G +++++    + +  +I++   +    + + 
Sbjct: 520 IGIPFRVTIGRK-IADGRIEVRNRRTKESVEVDIESAVEFILNLINEE 566


>gi|312877991|ref|ZP_07737931.1| prolyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795226|gb|EFR11615.1| prolyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 572

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         R+  +I + +R   +  G   +    L   + L +  
Sbjct: 26  MLRSGFMR-QLSSGIYVYLPLGYRVLRKIENIVREEMDRSGAQEVHMSALMPKE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
                    +F ++D + +   L  
Sbjct: 84  GRWAVFGPEMFRIKDRNEREYCLGP 108



 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 34/108 (31%), Gaps = 2/108 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +     +++     D           + L+  G+   +     +  G + K AD 
Sbjct: 461 IWPITVAPYEVIIVPVNVKDEAQNKIAFEIYENLQKNGVEVLIDDRDERA-GVKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P  +  G    S G L+I++    +    EI N   +    + Q 
Sbjct: 520 IGIPFRVTVGKK-VSEGKLEIRNRRTKESFEVEIDNAVEFIINLIKQE 566


>gi|317057674|ref|YP_004106141.1| threonyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315449943|gb|ADU23507.1| threonyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 648

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 87/339 (25%), Gaps = 17/339 (5%)

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL-------RA 199
                 D +  +G   ++       R +      ++ L+      +  + L       R 
Sbjct: 310 HWDHYRDGMFILGDPDDETKECFALRPMTCPFQYQVFLNRKRSYRDLPMRLGETSTLFRN 369

Query: 200 IDKLDKFGLQGVKL------LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            D  +  GL  V+        L         +F    +L    ++ +     +    S  
Sbjct: 370 EDSGEMHGLIRVRQFTISEGHLILRPEQLEEEFKGCLDLAKYCLETIGLAEDVSYRFSQW 429

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +            + + E     + +         I I      G +             
Sbjct: 430 DPANPNNKYEGTAEQWEEAQGAMKKILDDIGLDYEIGIDEAAFYGPKLDIQIKN-VFGKE 488

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +   Q  +      G    D          +  T        L + ++          
Sbjct: 489 DTLITIQIDMQIAKKFGMEYVDKDGKMKMPYIIHRTSVGCYERTLALLIEKYAGVLPLWL 548

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V I  +    +         + +R  G+R E+      N G ++K A     P   
Sbjct: 549 APEQVRILPI--KPEHNDYAYDLAEEMRDLGMRVEVDAEDD-NIGPKIKQARFDRVPYMF 605

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E   G + ++   +G+  +    +  +  +  + 
Sbjct: 606 IIGDNEVKDGTVTVRSRKEGELPAMPAADAIAKLKEEID 644



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 5/81 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   I +     G+   +TP +   +   K     D    G+F L
Sbjct: 263 GLPILLPKGAKVIQTLQRWIEDEEYKRGYQLTKTPFMSKRELY-KISGHWDHYRDGMFIL 321

Query: 74  QDDDGQW---ISLRYDLTAPL 91
            D D +     +LR  +T P 
Sbjct: 322 GDPDDETKECFALRP-MTCPF 341


>gi|291440752|ref|ZP_06580142.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291343647|gb|EFE70603.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 658

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 46/121 (38%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +   + +    R  G+R E+   S +    +++ A ++  P  +
Sbjct: 556 WLAPVQAVGIPIGDAHVEHLEKFAAAARKQGLRVEVDSSSDR-MQKKIRNAQKQKVPFMV 614

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  + + G +  +    G + +                  IP+ E ++ + K+++E  
Sbjct: 615 IAGDEDMANGAVSFRY-RDGSQENG-----------------IPVDEAIAKIVKVVEERA 656

Query: 494 E 494
           +
Sbjct: 657 Q 657


>gi|323702723|ref|ZP_08114384.1| threonyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532386|gb|EGB22264.1| threonyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 636

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +   Q L    IR E+    ++    +++ A  +  P  +
Sbjct: 534 WLAPVQVKVLPITDKHHDYARELVQKLDAMDIRVELD-ARNEKINYKIREAQTQKIPYML 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E   G + ++   KG   + ++    +  E  +   TI
Sbjct: 593 VIGDREMENGTVAVRQRGKGDIGAVKMDEFIAKIEDEIKNKTI 635



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R  ++  G+  I TP++  + SL +         + ++  
Sbjct: 261 GFPFFHPKGMVLRNELENFWRREHKKRGYQEIRTPII-LNRSLWEQSGHWAHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 319 TKIDDADYAVKPMNCPG 335


>gi|304312891|ref|YP_003812489.1| Prolyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301798624|emb|CBL46856.1| Prolyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 574

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 41/160 (25%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R   +  G   +  P+ + ++ L +        
Sbjct: 31  MIRRLAAGLYTWTPTGLRVLRKVERIVREEMDRAGAQEVLMPVTQPAE-LWQESGRFQAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D   +   L     ++ + L R   +++  +          +R     R   
Sbjct: 90  GPELLRFKDRHARDFVLGPTHEEVISDLVRNNVQSYKQLPANFYQIQTKFRDETRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F                     M          +G
Sbjct: 150 MRAREFLMKDSYSFHMTEDCLRETYQVMYNAYTAIFTRLG 189



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 33/111 (29%), Gaps = 3/111 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +      +      + +  M+        +  +   + L+ AG     +    +  G +
Sbjct: 462 DAQGIIWPDAIAPFHIALIPMNQHKSPRVHAAAEALYERLKQAGYEV-FYDDRKERPGVK 520

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
              A+    P  I+ G     +  ++ K     +     +     + + RV
Sbjct: 521 FADAELIGIPHRIVIGDRGLDQQQVEYKHRTDKETSDVGLDQLVEFLQTRV 571


>gi|298503373|ref|YP_003725313.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|298238968|gb|ADI70099.1| threonyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
          Length = 660

 Score = 61.8 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 96/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 292 RYIV--NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 349

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 350 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 409

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 410 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 467

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 468 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 514

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 515 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 574

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 575 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 631

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 632 GQKETQTVSVDNFVQAILADIA 653



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 275 GLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 333

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 334 MDMGDGEEFVLRPMNCP 350


>gi|257865905|ref|ZP_05645558.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257872238|ref|ZP_05651891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257799839|gb|EEV28891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257806402|gb|EEV35224.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 646

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 51/442 (11%), Positives = 115/442 (26%), Gaps = 81/442 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+  + TP++   D   K     D  ++ +F  
Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMANVDLY-KTSGHWDHYHEDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+ + LR             +         +YR  P+   E              
Sbjct: 321 MDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------- 360

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL           I    ++ LD +   IG++ D  + +
Sbjct: 361 GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLM---IGVYEDFNITD 417

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               L   D  +K           +   D++        L +   ++ + +   + E + 
Sbjct: 418 YRFRLSYRDPQNK----------DKYFDDDAMWENAQTMLKAAMDELELDYFEAEGEAAF 467

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
           +     V+   A         +  + +    ++   +                +   +  
Sbjct: 468 YGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMER 527

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F     +     F +                 ++                + L+      
Sbjct: 528 FVAYLTEVYKGAFPTWLA----------PIQASIIPVSVEAHSDYAYEIKERLQ------ 571

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                                    Q LR      E+    ++  G +++ +  +  P  
Sbjct: 572 ------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKIPYQ 601

Query: 433 IIQGTGERSRGMLQIKDLAKGK 454
           I+ G  E +   + I+     +
Sbjct: 602 IVVGDQEVNDATVNIRRYGSKE 623


>gi|331085681|ref|ZP_08334764.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330406604|gb|EGG86109.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 643

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 1/103 (0%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +                L+ A IR  +    S+  G +++ A     P  ++ G  
Sbjct: 538 QVKVLPISEKYHEYANEVAAKLKEAKIRCSVD-ERSEKIGYKIRDARLNKIPYMLVVGAK 596

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           E+  G++ ++    G E  R +    +     +   TI   EL
Sbjct: 597 EQEEGVVSVRSRFLGDEGQRSLDTFIAEITEEIKNRTIRKVEL 639



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R ++   G+  I TP++  +  L +         + +++ 
Sbjct: 260 GFPIFLPKGMILKNTLIDYWREVHTRAGYVEISTPIM-LNKQLWETSGHWAHYKENMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 VI-DEEDFAIKPMNCPG 334


>gi|306815206|ref|ZP_07449355.1| prolyl-tRNA synthetase [Escherichia coli NC101]
 gi|305850868|gb|EFM51323.1| prolyl-tRNA synthetase [Escherichia coli NC101]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQIK 571


>gi|239932385|ref|ZP_04689338.1| threonyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 653

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 46/121 (38%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +   + +    R  G+R E+   S +    +++ A ++  P  +
Sbjct: 551 WLAPVQAVGIPIGDAHVEHLEKFAAAARKQGLRVEVDSSSDR-MQKKIRNAQKQKVPFMV 609

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  + + G +  +    G + +                  IP+ E ++ + K+++E  
Sbjct: 610 IAGDEDMANGAVSFRY-RDGSQENG-----------------IPVDEAIAKIVKVVEERA 651

Query: 494 E 494
           +
Sbjct: 652 Q 652


>gi|237704354|ref|ZP_04534835.1| prolyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|26106541|gb|AAN78727.1|AE016755_227 Prolyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91070839|gb|ABE05720.1| prolyl-tRNA synthetase [Escherichia coli UTI89]
 gi|226902266|gb|EEH88525.1| prolyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
          Length = 590

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 49  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 107

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 108 GPELLRIADRGDRPFVLGP 126



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 479 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 537

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 538 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQIK 589


>gi|110640415|ref|YP_668143.1| prolyl-tRNA synthetase [Escherichia coli 536]
 gi|117622479|ref|YP_851392.1| prolyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|161486316|ref|NP_752183.2| prolyl-tRNA synthetase [Escherichia coli CFT073]
 gi|162138494|ref|YP_539251.2| prolyl-tRNA synthetase [Escherichia coli UTI89]
 gi|170680577|ref|YP_001742323.1| prolyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|191171415|ref|ZP_03032964.1| prolyl-tRNA synthetase [Escherichia coli F11]
 gi|215485356|ref|YP_002327787.1| prolyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218557136|ref|YP_002390049.1| prolyl-tRNA synthetase [Escherichia coli S88]
 gi|218688070|ref|YP_002396282.1| prolyl-tRNA synthetase [Escherichia coli ED1a]
 gi|227884892|ref|ZP_04002697.1| proline--tRNA ligase [Escherichia coli 83972]
 gi|300977725|ref|ZP_07174019.1| prolyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300990442|ref|ZP_07179210.1| prolyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301046653|ref|ZP_07193784.1| prolyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|331661266|ref|ZP_08362198.1| proline--tRNA ligase [Escherichia coli TA206]
 gi|331681580|ref|ZP_08382217.1| proline--tRNA ligase [Escherichia coli H299]
 gi|114152192|sp|Q8FKZ4|SYP_ECOL6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152193|sp|Q1RFZ4|SYP_ECOUT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123148404|sp|Q0TLD7|SYP_ECOL5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152112309|sp|A1A7N8|SYP_ECOK1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699141|sp|B7MBH6|SYP_ECO45 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701285|sp|B1LGZ7|SYP_ECOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782899|sp|B7UJ96|SYP_ECO27 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782901|sp|B7MP55|SYP_ECO81 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110342007|gb|ABG68244.1| prolyl-tRNA synthetase [Escherichia coli 536]
 gi|115511603|gb|ABI99677.1| prolyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|170518295|gb|ACB16473.1| prolyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|190908349|gb|EDV67939.1| prolyl-tRNA synthetase [Escherichia coli F11]
 gi|215263428|emb|CAS07748.1| prolyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218363905|emb|CAR01570.1| prolyl-tRNA synthetase [Escherichia coli S88]
 gi|218425634|emb|CAR06420.1| prolyl-tRNA synthetase [Escherichia coli ED1a]
 gi|222032025|emb|CAP74764.1| Prolyl-tRNA synthetase [Escherichia coli LF82]
 gi|227838141|gb|EEJ48607.1| proline--tRNA ligase [Escherichia coli 83972]
 gi|294489624|gb|ADE88380.1| prolyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|300301388|gb|EFJ57773.1| prolyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300305742|gb|EFJ60262.1| prolyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300409810|gb|EFJ93348.1| prolyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|307552047|gb|ADN44822.1| prolyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307629771|gb|ADN74075.1| prolyl-tRNA synthetase [Escherichia coli UM146]
 gi|312944803|gb|ADR25630.1| prolyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315285273|gb|EFU44718.1| prolyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315295532|gb|EFU54858.1| prolyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315300667|gb|EFU59894.1| prolyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|323950806|gb|EGB46683.1| prolyl-tRNA synthetase [Escherichia coli H252]
 gi|323955077|gb|EGB50853.1| prolyl-tRNA synthetase [Escherichia coli H263]
 gi|324008226|gb|EGB77445.1| prolyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324014120|gb|EGB83339.1| prolyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324112394|gb|EGC06371.1| prolyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|325496126|gb|EGC93985.1| prolyl-tRNA synthetase [Escherichia fergusonii ECD227]
 gi|331052308|gb|EGI24347.1| proline--tRNA ligase [Escherichia coli TA206]
 gi|331081801|gb|EGI52962.1| proline--tRNA ligase [Escherichia coli H299]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 461 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQIK 571


>gi|312966332|ref|ZP_07780558.1| prolyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312289575|gb|EFR17469.1| prolyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|323190405|gb|EFZ75680.1| prolyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 547

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
          +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 6  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 64

Query: 67 NKGVFSLQDDDGQWISLRY 85
             +  + D   +   L  
Sbjct: 65 GPELLRIADRGDRPFVLGP 83



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   +     +  G  
Sbjct: 436 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKER-PGVM 494

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K    G++   +  +   +   ++ 
Sbjct: 495 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYLVKQIK 546


>gi|325109306|ref|YP_004270374.1| prolyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969574|gb|ADY60352.1| Prolyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 578

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 19/130 (14%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     ++I     D + +S        L+  G+   M   S++  G +   AD 
Sbjct: 466 LWPISIAPYEVLIIPLKTDDEELMSAANSIYAELKEQGVDVLMDDRSAR-PGVKFNDADL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I+ G      G+ ++K                           +P+ ++V+ V 
Sbjct: 525 IGIPYRIVIGGKGLKEGVAEVK------------------ARTDADAEKVPLDQVVANVT 566

Query: 487 KILQENKEEI 496
            ++   KE +
Sbjct: 567 SLVSAAKEAL 576



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 15/51 (29%)

Query: 10 ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          +L  G         R   +    IR   E  G   +  P L+  +   +  
Sbjct: 34 QLMAGAYTYLPLGWRSVQKAAAIIREEMERAGACELHMPALQPIELFERTG 84


>gi|269302597|gb|ACZ32697.1| threonyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 635

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 58/192 (30%), Gaps = 10/192 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + + + ++   + ++   G+  I TP L     L +     D     +++L
Sbjct: 256 GMPFFHPRGMIVWDALIRYWKQLHTAAGYKEILTPQLMNRQ-LWEVSGHWDNYKANMYTL 314

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q  D +  +++         Y      +              R  + G    ++      
Sbjct: 315 QI-DDEDYAIKPMNCPGCMLYYKTRLHS--------YKEFPLRVAEIGHVHRQEASGALS 365

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +   A   D     +  + +E   +        +     L+  LE       D + + 
Sbjct: 366 GLMRVRAFHQDDAHVFLTPEQVEEETLNILQLVSTLYGTFGLEYHLELSTRPEKDTIGDD 425

Query: 194 LIVLRAIDKLDK 205
            +   A D L++
Sbjct: 426 SLWELATDALNR 437



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 3/102 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      L + +++ +           V I T+      +   +   +  +  G+ 
Sbjct: 505 HRALFGSIERFLGILIENFKGRFPLWLSPEQVRIITVA--DRHIPGAKELEEAWKRLGLV 562

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             +   SS++   +++ A        I  G  E +  +L ++
Sbjct: 563 VTLD-DSSESVSKKIRNAQNMQVNYMITLGDHEINENVLAVR 603


>gi|288937023|ref|YP_003441082.1| prolyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288891732|gb|ADC60050.1| prolyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAHGIDVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL 566


>gi|291563461|emb|CBL42277.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [butyrate-producing bacterium SS3/4]
          Length = 646

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +LD  R I++  G+  I TP++  + SL +     D     +++ 
Sbjct: 261 GFPFFLPKGMVLKNTLLDYWREIHKKAGYVEISTPII-LNRSLWETSGHWDHYKNNMYTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
              DG+  +++           A 
Sbjct: 320 II-DGEDYAIKPMNCPGGVLVYAS 342



 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 56/147 (38%), Gaps = 8/147 (5%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +    F      + + ++    +      + PV +  +          +    
Sbjct: 501 EKHRPIMIHRVCFGSIERFIGILIEHFAGAFPTW--LAPVQVKVLPISEKYEEYAKSVKA 558

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L  A IRAE+ L S K  G +++ A  +  P  ++ G  E++ G + ++   KG E + 
Sbjct: 559 ALDAADIRAEIDLRSEK-IGYKIREAQGQKIPYMLVVGQKEQADGTVSVRSRFKGDEGAE 617

Query: 459 EIKNNESWREARVAQ-----ITIPISE 480
           ++    +  +A +A      + +   E
Sbjct: 618 DLNVFIANIKAEIAGRVNRPVEVKKEE 644


>gi|283835256|ref|ZP_06354997.1| proline--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291068967|gb|EFE07076.1| proline--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVDYL 566


>gi|229099037|ref|ZP_04229971.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229118067|ref|ZP_04247426.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665290|gb|EEL20773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228684265|gb|EEL38209.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 645

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/449 (11%), Positives = 111/449 (24%), Gaps = 85/449 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L                       
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVL----------------------- 303

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                + +                                   N           +  + 
Sbjct: 304 ---GSREL----------------------------YETSGHWNHYRDGMFPSMEMDNEE 332

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  +      +R  + G L  +         +R
Sbjct: 333 LVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTM--HRYEMSGALSGL---------QR 381

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSM 252
           +  +   D         +K  L          +    +   E     +S+    D +K  
Sbjct: 382 VRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY---KDFGLENYSFRLSYRDPADTKKYY 438

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    +     G  +         VR        +    L 
Sbjct: 439 ADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLD 496

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    +   V               + +   +     S     +   ++  + +    
Sbjct: 497 FLLPERFELAYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTW 546

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  +  +      L   +     LR AGIR E+     K  G +++ A  +  P  
Sbjct: 547 LAPVQAQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREAQMQKIPYM 604

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  E +   + ++    G++ S  I 
Sbjct: 605 LVVGDNEVTENGVNVR--KYGEQKSETIA 631


>gi|229163567|ref|ZP_04291517.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619949|gb|EEK76825.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 646

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/449 (11%), Positives = 111/449 (24%), Gaps = 85/449 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L                       
Sbjct: 268 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVL----------------------- 304

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                + +                                   N           +  + 
Sbjct: 305 ---GSREL----------------------------YETSGHWNHYRDGMFPSMEMDNEE 333

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  +      +R  + G L  +         +R
Sbjct: 334 LVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTM--HRYEMSGALSGL---------QR 382

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSM 252
           +  +   D         +K  L          +    +   E     +S+    D +K  
Sbjct: 383 VRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY---KDFGLENYSFRLSYRDPADTKKYY 439

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    +     G  +         VR        +    L 
Sbjct: 440 ADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLD 497

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    +   V               + +   +     S     +   ++  + +    
Sbjct: 498 FLLPERFELAYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTW 547

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  +  +      L   +     LR AGIR E+     K  G +++ A  +  P  
Sbjct: 548 LAPVQAQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREAQMQKIPYM 605

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  E +   + ++    G++ S  I 
Sbjct: 606 LVVGDNEVTENGVNVR--KYGEQKSETIA 632


>gi|206579512|ref|YP_002240318.1| prolyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|226701300|sp|B5Y1H7|SYP_KLEP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|206568570|gb|ACI10346.1| prolyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAHGIDVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL 566


>gi|190404773|gb|EDV08040.1| eukaryotic initiation factor 2 alpha kinase [Saccharomyces cerevisiae
            RM11-1a]
          Length = 1659

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/428 (13%), Positives = 124/428 (28%), Gaps = 56/428 (13%)

Query: 15   FADCP---------TKEIRIRNRILDSIRNIYENYGFDPIETP--LLEYSDSLGKFLPDE 63
              D                +R+++ + +  I+  +G      P  +   +   G      
Sbjct: 1020 TNDILFDNSVPTSTPFANILRSQMTEEVVKIFRKHGGIENNAPPRIFPKAPIYG------ 1073

Query: 64   DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY--RIGPVFRNEKHG 121
                + V+ + D  G  + L+YDLT P+ARY+++N   I    R       P        
Sbjct: 1074 ---TQNVYEVLDKGGTVLQLQYDLTYPMARYLSKNPSLISKQYRMQHVYRPPDHSRSSLE 1130

Query: 122  PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            P +F +     +    S +   DAE   ++ + L    +        I N   +  +   
Sbjct: 1131 PRKFGEIDFDIISKSSSESGFYDAESLKIIDEILTVFPVFEKTNTFFILNHADI--LESV 1188

Query: 182  IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                  DK    L+             + VK  L               N++S  ++ + 
Sbjct: 1189 FNFTNIDKAQRPLVSRMLSQVGFARSFKEVKNELK-----------AQLNISSTALNDLE 1237

Query: 242  SF-LSIDLEKSMHELYELVKGTIAGEKGFN---ELVVISELVRKSGYNSNRIKISSTIVR 297
             F   +D E +   LY+L+  +   +K  +    +  +   ++      N +    +   
Sbjct: 1238 LFDFRLDFEAAKKRLYKLMIDSPHLKKIEDSLSHISKVLSYLKPLEVARNVVISPLSNYN 1297

Query: 298  GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
               Y  G ++ A+      +                +     +       A GF++    
Sbjct: 1298 SAFYKGGIMFHAVY-DDGSSRNMIAAGGRYDTLISFFARPSGKKSSNTRKAVGFNLAWET 1356

Query: 358  LIVALKS---------------LESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLR 401
            +    ++                   T    +     +      +  L          L 
Sbjct: 1357 IFGIAQNYFKLASGNRIKKRNRFLKDTAVDWKPSRCDVLISSFSNSLLDTIGVTILNTLW 1416

Query: 402  TAGIRAEM 409
               I+A+M
Sbjct: 1417 KQNIKADM 1424


>gi|123966215|ref|YP_001011296.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus str. MIT 9515]
 gi|123200581|gb|ABM72189.1| possible Histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT
           9515]
          Length = 383

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 123/384 (32%), Gaps = 44/384 (11%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
           I++ + N+Y+ +G++ +    +   D++      E      +  +       + LR ++T
Sbjct: 18  IVNDLNNVYKLWGYEEVSPSFINNLDTIK---GSEVINEDELIGIV--SNNSLCLRPEMT 72

Query: 89  APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
             + +  +        P R Y  G VF  ++     ++            S +T   E+ 
Sbjct: 73  TSIVKLTSTRLLNKKRPIRLYNSGIVFNKKQSYKNTYKFQENLQSGIELISYDTKFPEIE 132

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
           ++                        L   ++ I L  +  L   +   + +D +     
Sbjct: 133 VINI----------------------LFDAIDNINLIENSNLTLLVSTTKIMDLILFNYK 170

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
                 + +   +   +     N+      I+   +    E  +  + + +K        
Sbjct: 171 NNNYEEIKKCMVNLDQESLNRLNIDKNDQTILKELIFTRGEPEI--ILKKLKNIYGYNDV 228

Query: 269 FNELVVISELV-RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
             EL      + + +   + +I++  T    L  Y G V++ I             V   
Sbjct: 229 IKELENFFNTLSKIAKRYNIKIQLDPTYQPHLNLYAGIVFQLICENSF--------VKTI 280

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           +  GGRYD LV  F        G    I   I  L+ L    +  K+     +  +  DS
Sbjct: 281 IAKGGRYDELVRYFNPNEKIINGIGFTI--SIDNLRELIIDDSQSKK----KVLLLFKDS 334

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFL 411
             L K     + L+  GI   + L
Sbjct: 335 CLLDKGINEQKALQKKGITTILHL 358


>gi|295098681|emb|CBK87771.1| prolyl-tRNA synthetase, family II [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 26/107 (24%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     L   GI   M     +  G  
Sbjct: 461 DERGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELSAKGIDVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDSDEIEYKYRRNGEKQMIKTGDILDYL 566


>gi|151942256|gb|EDN60612.1| translation initiation factor eIF2 alpha kinase [Saccharomyces
            cerevisiae YJM789]
          Length = 1659

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/428 (13%), Positives = 124/428 (28%), Gaps = 56/428 (13%)

Query: 15   FADCP---------TKEIRIRNRILDSIRNIYENYGFDPIETP--LLEYSDSLGKFLPDE 63
              D                +R+++ + +  I+  +G      P  +   +   G      
Sbjct: 1020 TNDILFDNSVPTSTPFANILRSQMTEEVVKIFRKHGGIENNAPPRIFPKAPIYG------ 1073

Query: 64   DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY--RIGPVFRNEKHG 121
                + V+ + D  G  + L+YDLT P+ARY+++N   I    R       P        
Sbjct: 1074 ---TQNVYEVLDKGGTVLQLQYDLTYPMARYLSKNPSLISKQYRMQHVYRPPDHSRSSLE 1130

Query: 122  PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            P +F +     +    S +   DAE   ++ + L    +        I N   +  +   
Sbjct: 1131 PRKFGEIDFDIISKSSSESGFYDAESLKIIDEILTVFPVFEKTNTFFILNHADI--LESV 1188

Query: 182  IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                  DK    L+             + VK  L               N++S  ++ + 
Sbjct: 1189 FNFTNIDKAQRPLVSRMLSQVGFARSFKEVKNELK-----------AQLNISSTALNDLE 1237

Query: 242  SF-LSIDLEKSMHELYELVKGTIAGEKGFN---ELVVISELVRKSGYNSNRIKISSTIVR 297
             F   +D E +   LY+L+  +   +K  +    +  +   ++      N +    +   
Sbjct: 1238 LFDFRLDFEAAKKRLYKLMIDSPHLKKIEDSLSHISKVLSYLKPLEVARNVVISPLSNYN 1297

Query: 298  GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
               Y  G ++ A+      +                +     +       A GF++    
Sbjct: 1298 SAFYKGGIMFHAVY-DDGSSRNMIAAGGRYDTLISFFARPSGKKSSNTRKAVGFNLAWET 1356

Query: 358  LIVALKS---------------LESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLR 401
            +    ++                   T    +     +      +  L          L 
Sbjct: 1357 IFGIAQNYFKLASGNRIKKRNRFLKDTAVDWKPSRCDVLISSFSNSLLDTIGVTILNTLW 1416

Query: 402  TAGIRAEM 409
               I+A+M
Sbjct: 1417 KQNIKADM 1424


>gi|189091896|ref|XP_001929781.1| hypothetical protein [Podospora anserina S mat+]
 gi|27803058|emb|CAD60761.1| unnamed protein product [Podospora anserina]
 gi|188219301|emb|CAP49281.1| unnamed protein product [Podospora anserina S mat+]
          Length = 783

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 53/431 (12%), Positives = 106/431 (24%), Gaps = 38/431 (8%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +RI N I+D I+  Y   G+D + TP + ++ SL +         + +F L D D
Sbjct: 341 WLPHGMRIHNAIMDYIKEEYWARGYDEVMTPNM-FNVSLWEQSGHLAHYKEDMF-LLDVD 398

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +   L+               +               +        F    + +     
Sbjct: 399 KEQFGLKP-------------MNCPAHAMMFRHRERSHKELPLRLADFGVLHRNEASGAL 445

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           S                     IK     +    RK    +     L    +  + L  +
Sbjct: 446 SGLTRVRRFQQDDAHIFCREDQIKEEVADLFDFMRKFYGILGLTFKLKLSTRPEKFLGEI 505

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ +    + +         D      K   ++ E      +F    ++        
Sbjct: 506 ETWDRAESRLKEAL---------DEFAASDKDGGVSWELNPGDGAFYGPKID-------- 548

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                IA     N     + +        N      T     +  T    E         
Sbjct: 549 -----IAVLDCLNRPWQCATIQLDFQQPQNFSLEYQTGEAVHKGETKAAVEEPAPPAPEA 603

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           E +K                +S    + V       G      A+ +   +      M P
Sbjct: 604 EAEKDKDGKEKKKPLLIKKALSPGCARPVMIHRAMAGSIERFTAILAEHFAGKWPFWMSP 663

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +  +      L   +    +L+     A++   S      +++           + G 
Sbjct: 664 RQVIVIPVGMGFLDYAKEVAALLKKEKFYADVD-SSGNTLQKKIRNGQLAQYNFVFVVGD 722

Query: 438 GERSRGMLQIK 448
            E     + I+
Sbjct: 723 DEMRNRKVNIR 733


>gi|6320489|ref|NP_010569.1| Gcn2p [Saccharomyces cerevisiae S288c]
 gi|114152808|sp|P15442|GCN2_YEAST RecName: Full=Serine/threonine-protein kinase GCN2
 gi|1332634|gb|AAB64461.1| Gcn2p: Protein kinase, phosphorylates the alpha subunit of eIF-2
            (Swiss prot. accession number P15442). Note that this
            protein is lon [Saccharomyces cerevisiae]
 gi|207346500|gb|EDZ72979.1| YDR283Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|285811299|tpg|DAA12123.1| TPA: Gcn2p [Saccharomyces cerevisiae S288c]
          Length = 1659

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/428 (13%), Positives = 124/428 (28%), Gaps = 56/428 (13%)

Query: 15   FADCP---------TKEIRIRNRILDSIRNIYENYGFDPIETP--LLEYSDSLGKFLPDE 63
              D                +R+++ + +  I+  +G      P  +   +   G      
Sbjct: 1020 TNDILFDNSVPTSTPFANILRSQMTEEVVKIFRKHGGIENNAPPRIFPKAPIYG------ 1073

Query: 64   DRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY--RIGPVFRNEKHG 121
                + V+ + D  G  + L+YDLT P+ARY+++N   I    R       P        
Sbjct: 1074 ---TQNVYEVLDKGGTVLQLQYDLTYPMARYLSKNPSLISKQYRMQHVYRPPDHSRSSLE 1130

Query: 122  PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            P +F +     +    S +   DAE   ++ + L    +        I N   +  +   
Sbjct: 1131 PRKFGEIDFDIISKSSSESGFYDAESLKIIDEILTVFPVFEKTNTFFILNHADI--LESV 1188

Query: 182  IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                  DK    L+             + VK  L               N++S  ++ + 
Sbjct: 1189 FNFTNIDKAQRPLVSRMLSQVGFARSFKEVKNELK-----------AQLNISSTALNDLE 1237

Query: 242  SF-LSIDLEKSMHELYELVKGTIAGEKGFN---ELVVISELVRKSGYNSNRIKISSTIVR 297
             F   +D E +   LY+L+  +   +K  +    +  +   ++      N +    +   
Sbjct: 1238 LFDFRLDFEAAKKRLYKLMIDSPHLKKIEDSLSHISKVLSYLKPLEVARNVVISPLSNYN 1297

Query: 298  GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
               Y  G ++ A+      +                +     +       A GF++    
Sbjct: 1298 SAFYKGGIMFHAVY-DDGSSRNMIAAGGRYDTLISFFARPSGKKSSNTRKAVGFNLAWET 1356

Query: 358  LIVALKS---------------LESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLR 401
            +    ++                   T    +     +      +  L          L 
Sbjct: 1357 IFGIAQNYFKLASGNRIKKRNRFLKDTAVDWKPSRCDVLISSFSNSLLDTIGVTILNTLW 1416

Query: 402  TAGIRAEM 409
               I+A+M
Sbjct: 1417 KQNIKADM 1424


>gi|329996732|ref|ZP_08302530.1| proline--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328539331|gb|EGF65355.1| proline--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 26/107 (24%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     L   GI   M     +  G  
Sbjct: 461 DDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL 566


>gi|262044730|ref|ZP_06017778.1| proline-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259037920|gb|EEW39143.1| proline-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 26/107 (24%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     L   GI   M     +  G  
Sbjct: 461 DDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL 566


>gi|238893191|ref|YP_002917925.1| prolyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545507|dbj|BAH61858.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 26/107 (24%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     L   GI   M     +  G  
Sbjct: 461 DDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYTELSAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL 566


>gi|322515550|ref|ZP_08068532.1| proline--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322118393|gb|EFX90656.1| proline--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 571

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              +     +    D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F            +S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFVMKDAYSFHVEKASLQETYDVMYQVYSNIFTRLG 189



 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 26/92 (28%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L+  G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVQQFSEELYRSLKAQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G ++ K+   G++         ++ +  V 
Sbjct: 539 VNGEIEYKNRRTGEKSMITKDQLLAFLKENVK 570


>gi|290512444|ref|ZP_06551810.1| prolyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289774785|gb|EFD82787.1| prolyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 583

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 42  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 100

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 101 GPELLRIADRGDRPFVLGP 119



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 472 DDRGIIWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELRAHGIDVLMDDRKER-PGVM 530

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 531 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL 577


>gi|83590594|ref|YP_430603.1| threonyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83573508|gb|ABC20060.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Moorella
           thermoacetica ATCC 39073]
          Length = 633

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 38/102 (37%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                L  AGIRAE+   + K  G +++ A   + P  +
Sbjct: 533 WLAPVQVRVLPITDRHNDYAFKVRAELIRAGIRAEVNDRNDK-IGYKIRAAQMEHIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E + G + +++   G      +    +     +++  
Sbjct: 592 VVGDKEAAEGTVAVRERQAGDTGRVPLAEFIARVTREISRRE 633



 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN +    R  +   G+  I TP++  S +L +     D   + ++  
Sbjct: 260 GFPFFHHKGMIIRNELEQFWREEHRRAGYLEIRTPVI-LSRTLWEQSGHWDHYRENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
              DG   +++      
Sbjct: 318 TKIDGADYAIKPMNCPG 334


>gi|330833959|ref|YP_004408687.1| glycyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566098|gb|AEB94203.1| glycyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 571

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/420 (11%), Positives = 123/420 (29%), Gaps = 40/420 (9%)

Query: 77  DGQWISLRYDLTAP-----LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ- 130
            G    LR + TA        R        +       ++G V RNE        +  + 
Sbjct: 155 SGNVGYLRPE-TAQGMFTAFKRVYETTRQKLP--LGIAQVGEVARNEISPRQGLVRMREF 211

Query: 131 --CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              +V+      +     +     D +  +     +     +  KI + + EK+ ++   
Sbjct: 212 TIMEVEFFIDPEDKDVPWLEKFYDDEINVLFSNSKEKGERPSRIKIKEMVDEKLVVNP-- 269

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
                  +  A   +   G+        E          + A+ +S+  D +V  L   +
Sbjct: 270 --WMAFWMASASKFVQSIGIAK------ENFYFEEKLPYERAHYSSQTFDQIVEVLGEKV 321

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISEL-----------VRKSGYNSNRIKISSTIVR 297
           E S H        +   +    +L V  +            +       N  ++   ++ 
Sbjct: 322 EISGHAYRGNYDLSRHSKFSNEDLTVFKKFDNPRVVKRKTILINKDKLKNNPELQKEVMS 381

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
            +        E ++      + +K   F  +      +  +  +     P+ G    +  
Sbjct: 382 LISGKNADQIELLVNSGAEIKDRKLSEFIQIIEREEKEHGIKFYPHVVEPSFGVERCLYL 441

Query: 358 LIVALKSLESST-----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
            +++    +                V +  +    +  +K +    ML+      E+   
Sbjct: 442 SLLSAYKEKKDRVVLSLPKNIVPYQVAVFPLLDREELTAKAKKIYNMLKDN---FEVLYD 498

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            S + G +    D    P AI       S   + ++D    +++  + ++  ++ +   +
Sbjct: 499 DSGSIGKRYARVDEIGVPYAITVDPQSLSDDTVTVRDRDTWEQVRIKTQDLNTFIQKLFS 558


>gi|228987823|ref|ZP_04147932.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229158179|ref|ZP_04286246.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625137|gb|EEK81897.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228771871|gb|EEM20328.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 645

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/449 (11%), Positives = 111/449 (24%), Gaps = 85/449 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L                       
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVL----------------------- 303

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                + +                                   N           +  + 
Sbjct: 304 ---GSREL----------------------------YETSGHWNHYRDGMFPSMEMDNEE 332

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  +      +R  + G L  +         +R
Sbjct: 333 LVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTM--HRYEMSGALSGL---------QR 381

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSM 252
           +  +   D         +K  L          +    +   E     +S+    D +K  
Sbjct: 382 VRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY---KDFGLENYSFRLSYRDPADTKKYY 438

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    +     G  +         VR        +    L 
Sbjct: 439 ADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLD 496

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    +   V               + +   +     S     +   ++  + +    
Sbjct: 497 FLLPERFELAYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTW 546

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  +  +      L   +     LR AGIR E+     K  G +++ A  +  P  
Sbjct: 547 LAPVQAQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREAQMQKIPYM 604

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  E +   + ++    G++ S  I 
Sbjct: 605 LVVGDNEVTENGVNVR--KYGEQKSETIA 631


>gi|152968789|ref|YP_001333898.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|166980131|sp|A6T4Z7|SYP_KLEP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150953638|gb|ABR75668.1| prolyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 26/107 (24%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     L   GI   M     +  G  
Sbjct: 461 DDRGIVWPDAIAPFQVAILPMNMHKSYRVQELAEKLYAELSAQGIEVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL 566


>gi|120403299|ref|YP_953128.1| prolyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|152112935|sp|A1T7H2|SYP_MYCVP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119956117|gb|ABM13122.1| prolyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 585

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 39/110 (35%), Gaps = 2/110 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L     +      V +   + D+D+ +        L   G+   +    + + G + K
Sbjct: 476 DELGLRWPSTVSPFDVHVVIANKDADARTGATELAAELDRLGVDVLLD-DRTASPGVKFK 534

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    P  ++ G    + G+++++D   G +    +        A +A
Sbjct: 535 DAELLGVPWIVVVG-RGWADGIVELRDRFGGDKHEIPVDGAAERISAALA 583



 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  +I + +RN     G   I  P L      ++  ++    D     +
Sbjct: 40  GLYSWLPLGLKVLRKIENIVRNEMNAIGGQEILFPALLPRAPYETTNRWTEYGDT----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD       L  
Sbjct: 96  FRLQDRRNNDYLLGP 110


>gi|312794183|ref|YP_004027106.1| prolyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312181323|gb|ADQ41493.1| prolyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         R+  +I + +R   +  G   +    L   + L +  
Sbjct: 26  MLRSGFMR-QLSSGIYVYLPLGYRVLRKIENIVREEMDRSGAQEVHMSALMPKE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
                    +F ++D + +   L  
Sbjct: 84  GRWAVFGPEMFRIKDRNEREYCLGP 108



 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 2/108 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +     +++    +D +         + L+  G+   +     +  G + K AD 
Sbjct: 461 IWPITVAPYEVIVVPVNVNDENQNKIAFEIYEKLQKNGVEVLIDDRDERA-GVKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P  +  G    S G L+I++    +    EI+    +    + + 
Sbjct: 520 IGIPFRVTVGKK-VSEGKLEIRNRRTKESFEVEIEKAIEFVINLIKEE 566


>gi|240947869|ref|ZP_04752309.1| prolyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240297831|gb|EER48267.1| prolyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 571

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 47/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIVREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              +     +    D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWNDYGAELLRFNDRGNRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQVYSNIFTRLG 189



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M       +  +   + L+  G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEKVQAFAEELYKTLKAQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G ++ K+   G++     +   ++    V 
Sbjct: 539 ENGEIEYKNRRTGEKQMIAKEQLLAFLAENVK 570


>gi|15896426|ref|NP_349775.1| prolyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81854743|sp|Q97ED5|SYP_CLOAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15026247|gb|AAK81115.1|AE007813_2 Prolyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510583|gb|ADZ22219.1| prolyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 570

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/250 (10%), Positives = 68/250 (27%), Gaps = 5/250 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     ++   ++ + IR      G        L  S+ L K     +  
Sbjct: 31  MIRKMASGVYNYMPLGLKALKKVENIIREEMNAAGAQEFLASALLPSE-LWKESGRWEVF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +F L+D + +   L     ++    AR   +++  +       +        +   G
Sbjct: 90  GPEMFKLKDRNEREFCLGPTHEEVFTDFARSEIKSYKQLPVNLYQIQ-TKYRDERRPRFG 148

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
             R       D      +    ++             KR +                   
Sbjct: 149 MIRSREFVMKDAYSFDKDNEGLDVSYNKMYEAYTKIFKRCNVSCSAVAADSGAMGGSGSA 208

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                       +    +      ++    +  +   +  G+  K     ++ I+ +V F
Sbjct: 209 EFMVKSEIGEDEIAFCTECNYAANIEKAPAVPEKADKEELGELKKVETPHAKTIEELVEF 268

Query: 244 LSIDLEKSMH 253
             +D +K + 
Sbjct: 269 FGVDSKKFVK 278



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 2/105 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              ++     +++  +    + + + +     L+  G+ A +   + +  G + K AD  
Sbjct: 461 WPLSVAPYEVIVVPAVFKSEEQMKEAEKLYTELKKIGVDALLDDRNERA-GVKFKDADLI 519

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             P+ I  G    S G ++ K     +    ++    +  E    
Sbjct: 520 GIPMRITVGKK-ISEGKVEFKCRNSEEVEVIDLDKVIARVEEEFE 563


>gi|117928565|ref|YP_873116.1| threonyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117649028|gb|ABK53130.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidothermus
           cellulolyticus 11B]
          Length = 685

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 54/450 (12%), Positives = 118/450 (26%), Gaps = 51/450 (11%)

Query: 52  YSDSLGKFLPDEDR----PNKGVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFP- 105
           Y D L +     D         +FS  D+ G  +++        + R   EN+  +    
Sbjct: 273 YLDLL-REAERRDHRRLGVELDLFSFPDEIGSGLAVFHPKG--GIIRREMENYSRLQHEK 329

Query: 106 --CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
                     + +++        Q     +             +  M       +   R 
Sbjct: 330 AGYLFVNTPHITKHDLFATSGHLQSFAEGMFPPFELDGGVTYYLKPMNCPMHILIYRSRG 389

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
             +  +  R    G + +    G      R       D       + +   L +      
Sbjct: 390 RSYRELPMRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIFCTREQMGAELRDLLRFVL 449

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
            D  +   LT   +++     S        +  +  +   A  +     +V         
Sbjct: 450 -DLLRDYGLTDFYLELSTRDDSPKFVGDPADWAQATEALEAAARDSGLELVPDPGGAAYY 508

Query: 284 YNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
                ++    I R  +  T    +     F +  +         V              
Sbjct: 509 GPKISVQARDAIGRSWQISTIQLDFNLPKRFDLEYQAADGTRQRPVM------------- 555

Query: 343 GQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
              +    F        V L+    +    +  +  V I   D     L         LR
Sbjct: 556 ---IHRALFGSIERFFGVLLEHYAGAFPPWLAPVQAVGIPVSDAHVPYLRD--TVGASLR 610

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AGIR E+     +    +++ A ++  P  +I G  + +R  +  +    G + +    
Sbjct: 611 AAGIRYEVDDSDDR-MQKKIRNAAKQKIPYLLIAGDDDIARHAVSFRY-RDGSQKNG--- 665

Query: 462 NNESWREARVAQITIPISELVSTVKKILQE 491
                         +PI++ V+ ++  +  
Sbjct: 666 --------------VPIADAVAEIRDAIDR 681


>gi|148984063|ref|ZP_01817358.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923352|gb|EDK74465.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800452|emb|CBW33086.1| threonyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 647

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 96/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIV--NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 562 AWEVVKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 619 GQKETQTVSVDNFVQAILADIA 640



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|304396668|ref|ZP_07378549.1| prolyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356177|gb|EFM20543.1| prolyl-tRNA synthetase [Pantoea sp. aB]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     +  
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAVEILMPVVQPAD-LWQESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRHERPFVLGP 108



 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 32/131 (24%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K   +     LR  G+   +     +  G  
Sbjct: 461 DDRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYATLRAKGVEVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  I+ G        ++ K    G++                    I   E
Sbjct: 520 FADMELIGVPHTIVIGDRNLDNQEIEYKSRRAGEK------------------QMIKQDE 561

Query: 481 LVSTVKKILQE 491
           +V  + K L +
Sbjct: 562 IVEFLLKALNK 572


>gi|224002114|ref|XP_002290729.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974151|gb|EED92481.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 791

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 55/461 (11%), Positives = 116/461 (25%), Gaps = 82/461 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N++++ I+  Y   G+D I TP                     +++L
Sbjct: 412 GSAFWLPHGARIYNKLIEFIKEHYWRRGYDEIITP--------------------NIYNL 451

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                       DL                     ++ G     +        +  +  +
Sbjct: 452 ------------DL--------------------WHQSGHAMHYKDAMFCFDVEGKEWAM 479

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +            +     L             + +R  L G L  +      + ++ 
Sbjct: 480 KPMNCPGHCLMFAGKIRSYRDLPIRFADFG-----VLHRNELSGALSGLTRVRRFQQDDA 534

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            I  R     D+   + +  L       ++   T    L++     +        +K + 
Sbjct: 535 HIYCRE----DQIEDEVLGALDFMKSVYDTFGMTYKLELSTRPAKAL-------GDKELW 583

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  E      A  +  +            G  +         V              L F
Sbjct: 584 DRAE-----AALARAMDTFAGKGGWRENPGDGAFYGPKIDIKVMDAMERVHQCATVQLDF 638

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                   P+ FG     G  +      +   V             V  +          
Sbjct: 639 Q------LPIRFGLEYNTGSKEKGSEFARPVMVHRAMLGSVERMFAVLCEHYGGKWPLWL 692

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V++  +  D +  S+       L   G  A++ L S   F  +++ A        +
Sbjct: 693 SPRQVMVVPIHKDWNDYSQGVR--DKLHAEGFYADVDL-SKATFQKKVRNAQVEQYNFQL 749

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G  E     + I+      E  +++     + +   A+ 
Sbjct: 750 VVGEAEVKNDTVNIRTRDNKVEGEKKVDELIEYLKQLRAEY 790


>gi|46107732|ref|XP_380925.1| hypothetical protein FG00749.1 [Gibberella zeae PH-1]
          Length = 499

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/478 (10%), Positives = 112/478 (23%), Gaps = 68/478 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI NR++D +R  Y  YGF+ + TP + Y  SL       +     ++++
Sbjct: 61  GSPIFLPNGARIFNRLVDFLRKQYVRYGFEEVITPTI-YKKSLWAKSGHLENYADDMYAV 119

Query: 74  QDDDGQW-------------------------ISLRYDLTAPLARYVAENFDTIVFPCRT 108
                                             L+           A    +       
Sbjct: 120 --RGNTEPPPQHDGCCGSHQEYLKPEEEEEGDYGLKPMNCPGHCLIFASKRHSYRDLPVR 177

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y         +                         +++   +  TL+ V +       G
Sbjct: 178 YADFSPLHRNEISGALSGLTRVRRFHQDDGHIFCRPSQVEEEIKKTLDFVKVVYTVLRFG 237

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
            + R  L    +   +  + + ++    L+           GVK   G            
Sbjct: 238 ASYRLALSTRPKDHYIGTEAEWDQAESALKRALDASGMEW-GVKEGDGAFYGPKIDIVLT 296

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
            ++    Q   +     +     +                  E     E        +  
Sbjct: 297 DSDGKDHQTATIQLDFQLPKRFELEYQAPAP-----------EYEARGETTEDPALLAEY 345

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
             +   ++      +     A+L      +               +             +
Sbjct: 346 GPVRPVMIHRAVLGSVERLMALLIEKYDGK------------WPFWLNPRQAIVLTVNTS 393

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           T        +   L                       +S +L   Q +    R  G+  +
Sbjct: 394 TTVLDWAEHVRDVLVGQNKQFYEQ------------LESGALPSSQDHA--FRPTGLAVD 439

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-KDLAKGKELSREIKNNES 465
           +   +++  G ++K A        ++ G  +     + + K+    ++L   +K    
Sbjct: 440 VD-TTARPLGAKIKEARNNGYGQILVVGEDDVKNQQVALGKERLTPEDLRERLKTMVE 496


>gi|317129168|ref|YP_004095450.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474116|gb|ADU30719.1| prolyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 566

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 32/103 (31%), Gaps = 4/103 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        ++   ++   +R      G   +  P ++ S+ L K     +     +  
Sbjct: 37  SGVYSLLPLGLKALKKVEAIVREEMNRAGAQEMLMPAIQQSE-LWKESGRWEAYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           L D  G+  +L     ++   + R   + +  +       +  
Sbjct: 96  LHDRHGREFALGPTHEEVITTVVRDDVKTYKKLPMTLYQIQTK 138



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 31/97 (31%), Gaps = 2/97 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++      ++       +     +     L    +   +     +  G + K AD 
Sbjct: 463 IWPTSVTPFDVHIVPINMKQEEQKQLAEELYNELTEERLEVLIDDRPER-PGVKFKDADL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              P+ +  G    + G++++K    G+ L    K+ 
Sbjct: 522 YGFPVRVTVGKK-ANEGVVELKVRKTGETLEVHKKDL 557


>gi|238021436|ref|ZP_04601862.1| hypothetical protein GCWU000324_01336 [Kingella oralis ATCC 51147]
 gi|237868416|gb|EEP69422.1| hypothetical protein GCWU000324_01336 [Kingella oralis ATCC 51147]
          Length = 611

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 41/166 (24%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++   +R      G   +  P+++ +D L K  
Sbjct: 70  MLRAGLIKANA-SGLYTWMPMGLRVLRKVEAIVREEMNRAGAIELLMPVVQPAD-LWKES 127

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D     +  + D             +L   + R    ++  +       +       
Sbjct: 128 GRWDFYGDELLRITDRHDNAFCFSPTCEELITDIVRKEINSYKQLPKNFYHIQTKFRDER 187

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      F             S +     M          +G
Sbjct: 188 RPRFGVMRAREFVMKDAYSFHADFESLKATYQTMYDAYCRIFNRLG 233



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 39/125 (31%), Gaps = 21/125 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS--LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V+I  M++   +            L+ AG+   +     +  G  
Sbjct: 503 DERGIIWTEAMAPFSVVIVPMNYKKSNSVREAADQIYADLQAAGVDVLLDDRDERA-GVL 561

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           L  ++    P  I+ G      G ++  +   G+ +S                  +P++E
Sbjct: 562 LNDSELLGIPHRIVIGDRALKEGNVEYAERRSGESIS------------------VPLNE 603

Query: 481 LVSTV 485
           +V+ +
Sbjct: 604 IVAKI 608


>gi|157150881|ref|YP_001450077.1| threonyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189083628|sp|A8AWB7|SYT_STRGC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157075675|gb|ABV10358.1| threonyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 647

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/382 (12%), Positives = 97/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    I    +     P+   E +         + D+       +  +  +  M  
Sbjct: 279 RYIVDK--EIAAGYQHVYTPPLASVELYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  +        A +A
Sbjct: 619 GQKETHTVAVDEFVEAILADIA 640



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPLASVELY-KTSGHWDHYREDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|88860213|ref|ZP_01134852.1| prolyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88818207|gb|EAR28023.1| prolyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 573

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/142 (10%), Positives = 49/142 (34%), Gaps = 6/142 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R+  E  G   +  P+++ +D   +     ++ 
Sbjct: 31  MIRRLASGLYTWLPSGLRVLRKVEAIVRDEMEKAGAIEMLMPVIQPADLWIES-GRWEQF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   +  +L     ++     R    ++  +      ++I    R+E     
Sbjct: 90  GPELLRIKDRHNREFALGPTHEEVITEFVRKEVSSYKQLP--LNLFQIQTKVRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADA 145
              +  +  + +  S   + + 
Sbjct: 148 GVMRAREFTMKDAYSFHLSDEC 169



 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/126 (11%), Positives = 34/126 (26%), Gaps = 18/126 (14%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             + I  M+        +  +   Q L+ AGI         +  G  
Sbjct: 463 DAKGIVWPKAIAPFQIAIVPMNMHKSHRIPAVAERIYQELKAAGIEVLFDDRKER-PGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  ++ G        ++ K    G+     +                 ++E
Sbjct: 522 FNDMELIGIPHTLVIGERNLDDNCVEYKS-RSGENAMYNLDTV--------------VAE 566

Query: 481 LVSTVK 486
           L++ ++
Sbjct: 567 LIAKIR 572


>gi|297243824|ref|ZP_06927754.1| prolyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888245|gb|EFH26987.1| prolyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 604

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 18/128 (14%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D  +    +   + L   GI          + G + K
Sbjct: 490 DDAGLAWPMAIAPAQVHVVATGKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFK 549

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A+    PL  + G    + G ++I+D   G  +                   +P+ E  
Sbjct: 550 DAELVGVPLIAVAGRDTVNNGTIEIRD-RNGSNVEA-----------------VPVDEAA 591

Query: 483 STVKKILQ 490
           S + K ++
Sbjct: 592 SRIVKRVK 599



 Score = 44.1 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 8/88 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLG 57
           M +   +R   P G        +++ N++   IR      G   +  P L   E  ++  
Sbjct: 24  MQRAGYIRKSAP-GVWTWLPLGLKVLNKVQAIIREEINGIGAQEVHFPALLPREPYEATN 82

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRY 85
           ++    D     +F L+D       L  
Sbjct: 83  RWEEYGDN----IFRLKDRHEADYLLAP 106


>gi|262282640|ref|ZP_06060408.1| threonyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261931|gb|EEY80629.1| threonyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 647

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/382 (12%), Positives = 97/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    I    +     P+   E +         + D+       +  +  +  M  
Sbjct: 279 RYIVDK--EIAAGYQHVYTPPLASVELYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  +        A +A
Sbjct: 619 GQKETHTVAVDEFVEAILADIA 640



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPLASVELY-KTSGHWDHYREDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|229091361|ref|ZP_04222576.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228691990|gb|EEL45732.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 639

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPTWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  ++
Sbjct: 575 DMRDEK-LGYKIREAQMQKIPYVLVIGDKEMENGAVNVR--KYGEEKSEVVE 623



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/257 (10%), Positives = 67/257 (26%), Gaps = 15/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      +  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------EYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDKLWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFN 270
           ++ E        EK   
Sbjct: 490 QMPEKFDLNYIDEKNEK 506


>gi|15903011|ref|NP_358561.1| hypothetical protein spr0967 [Streptococcus pneumoniae R6]
 gi|116515709|ref|YP_816423.1| hypothetical protein SPD_0946 [Streptococcus pneumoniae D39]
 gi|148989099|ref|ZP_01820489.1| hypothetical protein CGSSp6BS73_04190 [Streptococcus pneumoniae
           SP6-BS73]
 gi|15458579|gb|AAK99771.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116076285|gb|ABJ54005.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
 gi|147925322|gb|EDK76400.1| hypothetical protein CGSSp6BS73_04190 [Streptococcus pneumoniae
           SP6-BS73]
          Length = 407

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 51/459 (11%), Positives = 129/459 (28%), Gaps = 68/459 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNR--ILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           M +   ++ + P+GF D    E++ +    I + +R+I    GF+ I+      S    +
Sbjct: 1   MVRNGNIKLDYPKGFFDL--DEMQFKKYCDIENHLRSIASINGFELIKV----SSAVYSR 54

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
                       + ++D+  + I L  D +  + RY   N                 +N+
Sbjct: 55  LNEYTHASIGRYYQVKDEKNRNIGLSSDGSMSILRYFYNNKQGYSSYKVCSNATIYRKNK 114

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
           K        +   +  ++          +  ++        +   +++I        +  
Sbjct: 115 KLREFSQFCYEIFNASSIDELQFNYINLILEILDSLELESVVILTNFNIWKIILSRYNNY 174

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            + +      K    +I    ID      L                              
Sbjct: 175 KDVLYELRKSKDILGMINSLNIDPSYVKFLSKFHKRNF---------------------- 212

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +   L+      +              +  +EL  + + +    +            R 
Sbjct: 213 TIYDLLNYCRVHKLF-------------ELIDELCQMQKYIEYIQH------------RI 247

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
                   +     F  +  K            G Y  L+     +N+ + G ++     
Sbjct: 248 TFQINLFDFRGSEIFEGIYYKCVDKYERPFLDAGTYSNLIFEVTKKNILSGGLAVC---- 303

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              ++++    +  ++   V +  +  ++  +  +     ++R   ++         +  
Sbjct: 304 ---IEAILDRIHISQKPKKVFVKYVGGENFKIDDFYNILTLIRKEKLKNHFVKEEVSSL- 359

Query: 419 NQLKYADRR----NCPLAIIQGTGERSRGMLQIKDLAKG 453
             +  A RR       L I  G  E++     I++L  G
Sbjct: 360 -AIAKAKRRAYIQKYDLFIAIGEREKNSHEFMIEELKTG 397


>gi|205356549|ref|ZP_03223312.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345554|gb|EDZ32194.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 510

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 415 VGIVPIGEAHIAYAKEIQKELLELNIDSEVY-EKNESLSKKIRIAEKQKLPMILVLGDDE 473

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 474 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 508


>gi|223938078|ref|ZP_03629976.1| threonyl-tRNA synthetase [bacterium Ellin514]
 gi|223893292|gb|EEF59755.1| threonyl-tRNA synthetase [bacterium Ellin514]
          Length = 618

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/287 (10%), Positives = 79/287 (27%), Gaps = 7/287 (2%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +   +             +L E     R     + FGL  V+ L          + 
Sbjct: 306 MNCPHHHRIFAAEPHSYRDLPLRLAEYGTCYRYEQSGELFGLMRVRSLNMNDAHIYCTEE 365

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
              A+  +   ++ + +  I   +     +        G+K  NE  +  +         
Sbjct: 366 QF-ADEFNAVNEMYLKYFKIFGLEKYQMRFSTHDPKRLGDKFVNEPELWKKTEDMVRNVL 424

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-----DGLVSRF 341
            +  I+   V     + G   +  +   +  E              ++     D   +  
Sbjct: 425 VKNNINFVEVPNEAAFYGPKIDVQVWSAIGREFTIATNQVDFAVPAKFGLTYRDRDNTEK 484

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
               +           +   ++    +         V + T+  D   ++  ++    LR
Sbjct: 485 TPLCIHRAPLGTHERFIGFLIEHYAGNFPLWLAPDQVRVLTIGDDEALVNYAKLIANELR 544

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +R E    +      ++  A++      ++ G  +   G + ++
Sbjct: 545 ANMVRCETDFRTDP-IKAKIAEAEQTKVHTMLVIGPRDMEAGNVSVR 590


>gi|330950620|gb|EGH50880.1| prolyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 571

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INLYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|284053071|ref|ZP_06383281.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 103

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 1/80 (1%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
           M PV++  +          +   Q L+   IRAE+   + +  G Q++  +    P+ ++
Sbjct: 1   MAPVMVRVLVVSDRFRDYAKSIVQSLKQQNIRAEVD-NTGERLGKQIRACELEKIPVTVV 59

Query: 435 QGTGERSRGMLQIKDLAKGK 454
            G  E     L ++  ++G 
Sbjct: 60  IGQRELDNQSLSVRTRSRGD 79


>gi|226942102|ref|YP_002797176.1| prolyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|226717029|gb|ACO76167.1| Syp [Laribacter hongkongensis HLHK9]
          Length = 569

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/160 (8%), Positives = 41/160 (25%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R      G   +  P ++ ++ L +     +  
Sbjct: 31  MIKRLSSGLYTWMPLGLRVLRKVEAIVREEMNRAGAIELLMPAIQPAE-LWQESGRWEFY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
            K +  ++D   +   +     ++     R   +++  +       +             
Sbjct: 90  GKELLRVKDRHERDFCVGPTHEEVITDAVRKEVKSYKQLPLNFYQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M          +G
Sbjct: 150 MRAREFVMKDAYSFHTDFDSLKATYQGMYDAYCRVFTRLG 189



 Score = 41.0 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 35/112 (31%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDH--DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M +       +        L  AG+   +     +  G  
Sbjct: 458 DERGIIFTDAMAPFTVSIVPMGYRRSESVKAAADALYAELVAAGVDVLLDDRDER-PGVL 516

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           L  ++    P  ++ G      G ++ +   + +  S E+    ++  +++A
Sbjct: 517 LADSELIGIPHRVVIGDRGLKEGKVEYQGRRETEATSVEVAEIAAFVRSKLA 568


>gi|206974097|ref|ZP_03235015.1| threonyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217959885|ref|YP_002338441.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229139078|ref|ZP_04267655.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|206748253|gb|EDZ59642.1| threonyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217066290|gb|ACJ80540.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228644433|gb|EEL00688.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 639

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E    +  +S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLNCKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   +  G +++ A  +  P  ++ G  E   G + ++    G+E S  ++
Sbjct: 575 DV-RDEKLGYKIREAQMQKIPYVLVIGDKEMENGAVNVR--KYGEEKSEVVE 623



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|149185120|ref|ZP_01863437.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831231|gb|EDL49665.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 671

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/460 (10%), Positives = 119/460 (25%), Gaps = 70/460 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI   +   +R   +  G+  I+TP L              +  + +F++
Sbjct: 271 GSVFWHPNGYRIWRELEAYMRRKMDGAGYREIKTPQLMDVRQWTAS-GHWGKYAENMFAV 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D                                   I P   +        +     D 
Sbjct: 330 PD-----------------------------------IVPDVDDSGAASAHPKVADDADW 354

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +      A   +      +   + I+  +      +R    G L  +      +  + 
Sbjct: 355 MAIKPMNCPAHVLVFKQGITSYRDLPIRLGEMGCC--HRNEPHGALHGLMRV--RQFTQD 410

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +      ++    L      D    F     L  E+         +  +    
Sbjct: 411 DAHIFCSESQVVEEVRAFCKLAESVYKDFGFTFAIKLALRPEKR--------LGSDADWD 462

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  + ++  +      NE     EL  +  + + +++   T   G  +  G +    +  
Sbjct: 463 KAEQELRDAVEEAGMMNEEFGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQGDRVLP 522

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             ++                      + +   +    F      + + ++          
Sbjct: 523 ERLDASYVGED-------------GEKHRPVMLHRAIFGSYERFIGILIEHYAGRMPVWL 569

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCP 430
                ++ T+  D+D     +     L  AGIR    L + K          +A     P
Sbjct: 570 APTQAVVATIVSDAD--DYAKEAVAKLEAAGIRVASDLRNEKINYKVREH-SHA---KVP 623

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             ++ G  E   G + ++ L +  +    ++   +  +A 
Sbjct: 624 HLLVVGNREAEEGTVAVRTLGQQHQKVMPLEEAIAMLKAE 663


>gi|157414515|ref|YP_001481771.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047019|sp|A8FK07|SYT_CAMJ8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157385479|gb|ABV51794.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747157|gb|ADN90427.1| Threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932015|gb|EFV10968.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 602

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 VGIVPIGEAHIAYAKEIQKELLELNIDSEVY-EKNESLSKKIRTAEKQKLPMILVLGDDE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 566 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600


>gi|222095974|ref|YP_002530031.1| threonyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221240032|gb|ACM12742.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus
           Q1]
          Length = 639

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E    +  +S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V I  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKIIPVS-NAVHVQYADEIADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  ++
Sbjct: 575 DVRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVVE 623



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|212715814|ref|ZP_03323942.1| hypothetical protein BIFCAT_00715 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661181|gb|EEB21756.1| hypothetical protein BIFCAT_00715 [Bifidobacterium catenulatum DSM
           16992]
          Length = 677

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/403 (10%), Positives = 105/403 (26%), Gaps = 30/403 (7%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +        +    +     +       L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNVIKQGFDYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T   G   K   L    +++        +                 ++ 
Sbjct: 417 EQMKDELKNLLTFVLG-LLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEVAKES 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
             EL +              ++    I R  +  T  +                      
Sbjct: 476 GLEL-IDDPCGAAFYGPKISVQARDAIGRTWQVSTIQL---------------DFNLPER 519

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
            G        +  +   +    F        V L+    +      + PV +  +    +
Sbjct: 520 FGLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVADE 577

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                Q +   L    +R E+ +   + FG +++ A +   P  +I G  + +   +  +
Sbjct: 578 FAPHLQQFIASLEEETVRCEIDMSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSFR 636

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
               G +L+    +    +   V +  + ++  V   K  + +
Sbjct: 637 -FRDGSQLNGVPTDEAKAQIMTVLKKRVQVNN-VDDFKAAIAD 677


>gi|319408595|emb|CBI82250.1| Prolyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 441

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 61/459 (13%), Positives = 112/459 (24%), Gaps = 71/459 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++ +++   IR   +  G   I  P ++  D L       D     +  +
Sbjct: 38  GIYSWLPLGKKVLDKVCTIIREEQKQAGALEILMPTIQSVD-LWHESGRYDDYGFEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEKHGPGRFR 126
           +D   + +       ++   + R    ++  +       +         R        F 
Sbjct: 97  KDRQERDLLYGPTNEEIVTDIFRSYVRSYKDLPLNLYQIQWKFRDEIRPRFGVMRSREFL 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI-LEKIGLH 185
                  D    SA+ +   M +    T   +G+K                     +   
Sbjct: 157 MKDAYSFDLDYESAKISYNRMFVAYLRTFSRMGLKVIPTRADTGPIGGERSHEFTILAET 216

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
           G+  +      L     L                   S DFT    LT            
Sbjct: 217 GESAIFCDKQFLDINAPLF------------------SIDFTDKTVLTD----------- 247

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                       +VK          E+    E  +    N         +     + T  
Sbjct: 248 ------------IVKQWTTFYAATEEMHNEEEWSKIPKSNQLS-ARGIEVGHIFYFGTKY 294

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                      + K+ PV  GS G G                     +  + +  +    
Sbjct: 295 SVPMEAKVMGKDGKEHPVFMGSYGIG------------------PSRLVAAAIEASHDEN 336

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                         I  M  D    +       Q L  AG    +   + +  G +    
Sbjct: 337 GIIWPKPIAPFDFGIINMKPDDKKCNHMCETLYQGLIRAGFDPLLDDRNER-PGVKFAIM 395

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           D    P  II G    ++  ++IKD   G + S  I++ 
Sbjct: 396 DLIGLPTQIIVGPKSAAQNEVEIKDRKTGAKESLTIESV 434


>gi|253996955|ref|YP_003049019.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253983634|gb|ACT48492.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 635

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/167 (7%), Positives = 48/167 (28%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G      +   I   +   +R +++++G+  + TP +    +L +        
Sbjct: 255 MQDDAP-GMVFWHPRGWSIWQEVEQYMRQMFKSFGYQEVRTPTVMDK-TLWEKSGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F +   + +  +++        +       +                 +       
Sbjct: 313 RDNMF-VTSSENREYAVKPMNCPGHVQIFNNQLHSYRDLPLRLAEFGSCHRNEPSGSLHG 371

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +AD ++ +     D+       K
Sbjct: 372 LMRVRGFTQDDAHIFCTEDQIEAEVADFIQMLYKAYGDFGFNDVLVK 418



 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/406 (11%), Positives = 109/406 (26%), Gaps = 52/406 (12%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +  +      +++     V  +  +             +        
Sbjct: 266 HPRGWSIWQEVEQYMRQMFKSFGYQEVRTPTV--MDKTLWEKSGHWQNYRDNMFVTSSEN 323

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDD--KLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
           R      +N    +     ++  + D   +L E     R        GL  V+       
Sbjct: 324 REYAVKPMNCPGHVQIFNNQLHSYRDLPLRLAEFGSCHRNEPSGSLHGLMRVRG----FT 379

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
            D++  F     + +E  D +        +   +++   +        G +E    +E  
Sbjct: 380 QDDAHIFCTEDQIEAEVADFIQMLYKAYGDFGFNDVLVKLSTRPEKRVGADETWDKAEAA 439

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRY 334
             +  N+N +        G  Y     +        +    +              G  Y
Sbjct: 440 LANALNANNLAFDLQPGEGAFYGPKIEF---TLKDSLGRLWQCGTIQLDFNLPERLGAEY 496

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
               +  +   +        + R I  L    +    +  + PV +  ++         +
Sbjct: 497 VAEDNSRQRPVMLHRAIVGSMERFIGILIENYAGAMPLW-LAPVQVMVLNISESQADYVR 555

Query: 395 MYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              + LR  GIR E  L + K        +             P  ++ G  E   G L 
Sbjct: 556 QVVETLRQNGIRCEFDLRNEKITYKIREHSMQK---------MPYLLVAGEREMQAGHLA 606

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           ++        +R+ ++  S          +PI  L+  +K  ++  
Sbjct: 607 VR--------TRKGEDLGS----------MPIDALIERLKAEIEAK 634


>gi|227833360|ref|YP_002835067.1| Prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184346|ref|ZP_06043767.1| prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254782894|sp|C3PH25|SYP_CORA7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|227454376|gb|ACP33129.1| Prolyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 589

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 58/189 (30%), Gaps = 26/189 (13%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +  L      E       G          ++     + VP  G        ++A+ + + 
Sbjct: 420 QGTLTLERGIELGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGIGVTRMLAVLAEQR 479

Query: 368 STNNIKEMG------PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                           V +   + D+ +L   Q   + L  AGI          + G + 
Sbjct: 480 HDEKGLNWPVAVAPYQVHVAVANKDAAALEAGQKLVEDLDRAGIEVLYDDRPKVSPGVKF 539

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K A+    P   I G    + G+++++ +  G+                     +P   +
Sbjct: 540 KDAELLGMPFIAILG-RAFADGIIELR-IRGGE------------------TREVPADSI 579

Query: 482 VSTVKKILQ 490
           V T+ ++++
Sbjct: 580 VDTLTELIR 588



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R   +I D IR      G   +  P L   E  +   ++    D     +
Sbjct: 40  GVYTWLPLGLRAMRKIEDVIRQEMNAIGGQEMLFPALLPREPYEESNRWTEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G  + L  
Sbjct: 96  FRLKDRKGADMLLGP 110


>gi|94498868|ref|ZP_01305406.1| prolyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94428500|gb|EAT13472.1| prolyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 584

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 44/160 (27%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        ++   ++   +R   +  G   +  P ++ ++ L +        
Sbjct: 31  MIRKLASGLYTWLPLGLKTLRKVEKVVREEMDAAGAQEVLMPAVQPAE-LWEESGRWFEY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEK 119
              +  L+D   +   +     ++   LAR    ++  +       +         R   
Sbjct: 90  GGELLRLKDRHNRDFCVGPTHEEVITDLARNELNSYKQLPSNFYQIQTKFRDETRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F           G S +     M     +    +G
Sbjct: 150 MRSREFIMKDAYSFHIDGDSLQQTYDRMHQAYTNIFTRLG 189


>gi|15835484|ref|NP_297243.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285665|ref|ZP_06195059.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289673|ref|ZP_06195975.1| threonyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301337060|ref|ZP_07225262.1| threonyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878797|sp|Q9PJF9|SYT_CHLMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|7190897|gb|AAF39666.1| threonyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 635

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/157 (9%), Positives = 45/157 (28%), Gaps = 2/157 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + I N ++D  + +++  G+  I+TP L   + L +     +   + +++L
Sbjct: 256 GMPFFHPRGMVIWNALIDYWKRLHQLAGYQQIQTPQLMSRE-LWEISGHWENYKENMYTL 314

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D +  +++         Y      +                 +              
Sbjct: 315 T-VDEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELSGALSGLMRVRTF 373

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
               +       ++     + L  V      + +  +
Sbjct: 374 HQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLDYH 410



 Score = 43.7 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 35/359 (9%), Positives = 102/359 (28%), Gaps = 33/359 (9%)

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           ++        F    +    +  +       +     ++   +   +      + +    
Sbjct: 250 QQSYSAGMPFFHPRGMVIWNALIDYWKRLHQLAGYQQIQTPQLMSRELWEISGHWENYKE 309

Query: 178 ILEKIGLHGDDKLNERL----IVLRAIDKLDKFGLQGVKL-------------------L 214
            +  + +  +D   + +     +L    +L  +    +++                    
Sbjct: 310 NMYTLTVDEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELSGALSGLMR 369

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
           +     D++  F     +  E ++I+     +     +    EL      G  G ++L  
Sbjct: 370 VRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLDYHLELSTRPEQGTIGSDDLWE 429

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           ++           + +    I  G   + G   +  +   +    Q   +   +    R+
Sbjct: 430 LAT--EALKNALVKSQKPFIISPGEGAFYGPKIDIHVKDAINRTWQCGTIQLDMFLPERF 487

Query: 335 DGLVSRFKGQNV-----PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
           D   +  +G+           F      L + ++  +           V I T+    ++
Sbjct: 488 DLKYTNPQGEKSTPIMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHVRIITVADRHEA 547

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               Q   +     GI A +   +S++   +++ A        I  G  E    +L ++
Sbjct: 548 R--AQELAKYFTQQGILATVD-QASESVSKKIRNAQNMQVNYMITIGDKELETQLLAVR 603


>gi|327470637|gb|EGF16093.1| threonine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 645

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/380 (10%), Positives = 96/380 (25%), Gaps = 18/380 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +      +  Q D+       +  +  +  M  
Sbjct: 279 RYIVDK--ELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D     NLT E    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYADFNLT-EYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         V+        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEAHIDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR  G+RA++    ++    +++ +     P  +I G  E     + ++   +
Sbjct: 562 AWQVAKKLRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEVEDSTVNVRRYGQ 620

Query: 453 GKELSREIKNNESWREARVA 472
            +  +  +        A +A
Sbjct: 621 KETHTIPVDEFVEQILADIA 640



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATVRRELERYIVDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|322368472|ref|ZP_08043041.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320552488|gb|EFW94133.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 640

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/353 (12%), Positives = 101/353 (28%), Gaps = 14/353 (3%)

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           + + +  ++  +     +       D +  + +   +Y +   N      I ++      
Sbjct: 290 YDEVETPHLFRTELWKKSGHYDNYVDDMFLLDVNDEEYGLKPMNCPGHATIFDQHSWSYR 349

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D         +   K  +  L G+  +      D         +    +I  ++  +   
Sbjct: 350 DLPIRYFENGKVYRKEQRGELSGLSRVWSFTIDDGH--LFVRPDQIEREIRQVMDLIFEV 407

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           +E    ++   +        G +EL   +E   +S   S  I        G  Y     +
Sbjct: 408 IETFDLDVEVALATRPEKSVGSDELWEHAEEQLRSVLESTGIDYDIEAGDGAFYGPKIDF 467

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-----PATGFSIGISRLIVAL 362
                   + +   P V        R+D      + +           +       +V +
Sbjct: 468 GFEDALGRVWDG--PTVQLDFNMPERFDLTYVTEENEEERPVMIHRALYGSYERFFMVLI 525

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +           V +  +    D+L         L     R E+    S   G +++
Sbjct: 526 EHFDGKFPLWLSPEQVRVLPVS--DDNLGYAHRVANELDD--FRVEVE-DRSWTVGRKIQ 580

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            A     P  II G  E   G + ++D  + +E    ++      EA   + +
Sbjct: 581 QAHDDRVPYMIIVGGDEEEAGTISVRDRLEREEKDVSLEAFREHLEAERDEKS 633



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 57/217 (26%), Gaps = 19/217 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   + D    +    G+D +ETP L  ++ L K     D     +F L
Sbjct: 262 GLPLYHPHGKTILRELSDYAGELNRGAGYDEVETPHLFRTE-LWKKSGHYDNYVDDMF-L 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D + +   L+       A    ++  +                 K   G      +   
Sbjct: 320 LDVNDEEYGLKPMNCPGHATIFDQHSWSY-RDLPIRYFENGKVYRKEQRGELSGLSRVWS 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +         +        +  +                   ++E   L  +  L  R
Sbjct: 379 FTIDDGHLFVRPDQIEREIRQVMDLIF----------------EVIETFDLDVEVALATR 422

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
                  D+L +   + ++ +L     D   +   GA
Sbjct: 423 PEKSVGSDELWEHAEEQLRSVLESTGIDYDIEAGDGA 459


>gi|308185763|ref|YP_003929894.1| Prolyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056273|gb|ADO08445.1| Prolyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 572

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     +  
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAVEILMPVVQPAD-LWQESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRHERPFVLGP 108



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 33/131 (25%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR  G+   +     +  G  
Sbjct: 461 DDRGIIWPDALAPFEVAILPMNMQKSFRVKELAEELYATLRAKGVEVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  I+ G        ++ K    G++                    I   E
Sbjct: 520 FADMELIGVPHTIVIGDRNLDNQEIEYKSRRAGEK------------------QMIKQDE 561

Query: 481 LVSTVKKILQE 491
           +V  + K L +
Sbjct: 562 IVDFLLKALNK 572


>gi|282855610|ref|ZP_06264924.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282586540|gb|EFB91794.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 640

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D L   +   + L+   +R E+     +  G +++ A     P  +
Sbjct: 531 WLAPVQVKLLAVSDDHLPYAREVAEKLQNLNVRVEID-RRDEKLGRKIRDAQMEKVPYML 589

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E     + ++D AKG 
Sbjct: 590 VIGDKEVEARTVAVRDRAKGD 610



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           GF     K + + N+++   R ++   G+    TP +   D   +     D   + ++
Sbjct: 257 GFPFFHPKGMVVMNKLMSFWRRLHFLNGYTEARTPQILNRDLWLRS-GHWDHYRENMY 313


>gi|242278211|ref|YP_002990340.1| prolyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511591|sp|C6BYX7|SYP_DESAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|242121105|gb|ACS78801.1| prolyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 580

 Score = 61.4 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 39/109 (35%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     ++  N++   +R      G   +  P+++  D L +     D  
Sbjct: 31  MIRKLTSGIYNYLPLGLKSVNKVAAIVREEMNRAGALEVLMPMVQPGD-LWQETGRWDYY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            K +  ++D  G+   L     ++   L R   +++  +       +  
Sbjct: 90  GKELLRVKDRHGRDYCLGPTHEEVITDLVRGEVKSYKQLPLNLYQIQTK 138



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/266 (10%), Positives = 76/266 (28%), Gaps = 9/266 (3%)

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
             +++   E   + +G     A     +I+ + +      +  +    + + G   G+  
Sbjct: 316 NEIEMASEEQVKEWTGAPVGFAGPVGLKIERIFA------DHELLTETDWIAGANKGDTH 369

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
              L +  +  +   +   R+   +                 +G       +      + 
Sbjct: 370 IKHLSLGRDC-KIEQFADLRVITEADPCPECGAAIEFTKGIEVGHVFKLGSKYSKSMEAT 428

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
                            +  +             ++       I      +I+    D  
Sbjct: 429 FLDENGKTQPMVMGCYGIGVSRIVASAIEQNND-ENGAIFPPTIAPFELCVISLGGKDEA 487

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              K + +   L   GI A  +    +  G +   AD    P+ ++ G      G+++ K
Sbjct: 488 VNEKAEEFYNELMEMGIDAA-YDDRKERPGVKFADADLIGYPMQLVIGGKGLKNGIVEAK 546

Query: 449 DLAKGKELSREIKNNESWREARVAQI 474
           +   G+++   ++      +A  A+I
Sbjct: 547 NRKTGEKIELPLEGFTEAFKAWRAEI 572


>gi|228941754|ref|ZP_04104301.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974678|ref|ZP_04135244.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981272|ref|ZP_04141572.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778472|gb|EEM26739.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785081|gb|EEM33094.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817966|gb|EEM64044.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942359|gb|AEA18255.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 645

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 92/337 (27%), Gaps = 23/337 (6%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M M   + +       +   +  N+      +  +I   G     
Sbjct: 311 TSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRY 370

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT------SEQIDIMVSFLS 245
           E    L  + ++    L    + +   +            L        E     +S+  
Sbjct: 371 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKDFGLENYSFRLSYRD 430

Query: 246 I-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +K   +     K     ++  +E+    +     G  +         VR       
Sbjct: 431 PADTKKYYADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDE 488

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +    L F +    +   V               + +   +     S     +   ++ 
Sbjct: 489 TLSTVQLDFLLPERFELTYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEE 538

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            + +         V +  +      L   +     LR AGIR E+     K  G +++ A
Sbjct: 539 YKGAFPTWLAPVQVQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREA 596

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +  P  ++ G  E +   + ++    G++ S  I 
Sbjct: 597 QMQKIPYMLVVGDNEVTENGVNVR--KYGEQKSETIA 631



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L   +         +    G+F  
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVLGSRELYETS-GHWNHYRDGMFPS 325

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D + + LR             +         +YR  P+   E     R+  
Sbjct: 326 MEMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGTMHRYEM 372


>gi|229196601|ref|ZP_04323345.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228586957|gb|EEK45031.1| Threonyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 639

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E    +  +S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLNCKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEIVDKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  ++
Sbjct: 575 DVRDEK-LGYKIREAQMQKIPYVLVIGDKEMENGAVNVR--KYGEEKSEVVE 623



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|254456980|ref|ZP_05070408.1| threonyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085772|gb|EDZ63056.1| threonyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 602

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/365 (10%), Positives = 104/365 (28%), Gaps = 17/365 (4%)

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           ++  +       +  +    ++  ++         M    ++ +       +   + +  
Sbjct: 248 YKAHRKRGYEPVRGPEMLRSDLWKTSGHYQNYGENMYFTKIDDIEFGVKPMNCVGHIKVY 307

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
            D +     L    K  E  +V R        GL  V+    +            +    
Sbjct: 308 EDELRSYRDLPI--KYFEYGVVHRHEFTGALHGLFRVREFTQDD-----AHIFCTSEQIE 360

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           EQI  +V F+   +     +   +V        G +E+  +S    K+  + N +     
Sbjct: 361 EQIIEVVDFVDKIMSTFEFDYKMMVSTKPEKAVGSDEVWEVSTQALKNAMDKNNLPYEID 420

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPAT 349
              G  Y      +       +  + +                 Y+G  +      +   
Sbjct: 421 EGGGAFYGPKIDIKIT---DAIGREWQCGTIQLDFNLPERFELEYNGENNEKIQPVMIHR 477

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                  R I  L    +    +  + P  +  +          +     L      +E+
Sbjct: 478 AILGSFERFIGILTEHYAGEFPMF-IAPTQVAIVPIADTHHGYAKELADKLIDINADSEI 536

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +  +  +   +++ A++   P+ +I G  E     + I+D    ++ +          + 
Sbjct: 537 YSKND-SLNKRIRTAEKTRVPMLVIIGDEEVEGRTVAIRDRRTREQYNLSEDEFLKLIQT 595

Query: 470 RVAQI 474
           ++ ++
Sbjct: 596 KINEV 600



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF        R+R R+   +   +   G++P+  P +  SD L K         + ++  
Sbjct: 228 GFPIWLPAGGRLRARLESLLYKAHRKRGYEPVRGPEMLRSD-LWKTSGHYQNYGENMY-F 285

Query: 74  QDDDGQWISLRYDLTAP 90
              D     ++      
Sbjct: 286 TKIDDIEFGVKPMNCVG 302


>gi|325569916|ref|ZP_08145910.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325157039|gb|EGC69207.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 646

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 51/442 (11%), Positives = 115/442 (26%), Gaps = 81/442 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+  + TP++   D   K     D  ++ +F  
Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMANVDLY-KTSGHWDHYHEDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+ + LR             +         +YR  P+   E              
Sbjct: 321 MDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------- 360

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL           I    ++ LD ++   G++ D  + +
Sbjct: 361 GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMV---GVYEDFNITD 417

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               L   D  +K           +   D++        L +   ++ + +   D E + 
Sbjct: 418 YRFRLSYRDPQNK----------DKYFDDDAMWENAQTMLKAAMDELELDYFEADGEAAF 467

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
           +     V+   A         +  + +    ++   +                +   +  
Sbjct: 468 YGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENNHRPVVIHRGIVSTMER 527

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F     +     F +                 ++                + L+      
Sbjct: 528 FVAYLTEVYKGAFPTWLA----------PIQASIIPVSVEAHSDYAYEIKERLQ------ 571

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                                    Q LR      E+    ++  G +++ +  +  P  
Sbjct: 572 ------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKIPYQ 601

Query: 433 IIQGTGERSRGMLQIKDLAKGK 454
           I+ G  E +   + I+     +
Sbjct: 602 IVVGDQEVNDATVNIRRYGSKE 623


>gi|30264646|ref|NP_847023.1| threonyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530117|ref|YP_021466.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187467|ref|YP_030719.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481700|ref|YP_038622.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52140935|ref|YP_085897.1| threonyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65321944|ref|ZP_00394903.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165871455|ref|ZP_02216102.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167636725|ref|ZP_02395009.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167642081|ref|ZP_02400304.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170689721|ref|ZP_02880895.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708708|ref|ZP_02899146.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653139|ref|ZP_02935426.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196042361|ref|ZP_03109631.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218905803|ref|YP_002453637.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866553|ref|YP_002751931.1| threonyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817360|ref|YP_002817369.1| threonyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917215|ref|ZP_04080772.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929623|ref|ZP_04092641.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935883|ref|ZP_04098693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948301|ref|ZP_04110584.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229093673|ref|ZP_04224773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229124142|ref|ZP_04253334.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186832|ref|ZP_04313987.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229601552|ref|YP_002868855.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254686931|ref|ZP_05150789.1| threonyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254720893|ref|ZP_05182684.1| threonyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736684|ref|ZP_05194390.1| threonyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741722|ref|ZP_05199409.1| threonyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754681|ref|ZP_05206716.1| threonyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757513|ref|ZP_05209540.1| threonyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|30259321|gb|AAP28509.1| threonine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505265|gb|AAT33941.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181394|gb|AAT56770.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333256|gb|AAT63902.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51974404|gb|AAU15954.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|164712752|gb|EDR18282.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167509956|gb|EDR85379.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167527843|gb|EDR90677.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170126388|gb|EDS95277.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170666324|gb|EDT17113.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172081663|gb|EDT66734.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196026805|gb|EDX65442.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218536622|gb|ACK89020.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225787158|gb|ACO27375.1| threonine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227005330|gb|ACP15073.1| threonine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228596569|gb|EEK54234.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228659444|gb|EEL15092.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228689760|gb|EEL43567.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228811288|gb|EEM57626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823651|gb|EEM69473.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830010|gb|EEM75629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842416|gb|EEM87507.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229265960|gb|ACQ47597.1| threonine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 645

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 93/337 (27%), Gaps = 23/337 (6%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M M   + +       +   +  N+      +  +I   G     
Sbjct: 311 TSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRY 370

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT------SEQIDIMVSFLS 245
           E    L  + ++    L    + +   +            L        E     +S+  
Sbjct: 371 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKDFGLENYSFRLSYRD 430

Query: 246 IDLEKSMHELYELV-KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +  K  +   E+  K     ++  +E+    +     G  +         VR       
Sbjct: 431 PEDTKKYYADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDE 488

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +    L F +    +   V               + +   +     S     +   ++ 
Sbjct: 489 TLSTVQLDFLLPERFELSYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEE 538

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            + +         V +  +      L   +     LR AGIR E+     K  G +++ A
Sbjct: 539 YKGAFPTWLAPVQVQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREA 596

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +  P  ++ G  E +   + ++    G++ S  I 
Sbjct: 597 QMQKIPYMLVVGDNEVTENGVNVR--KYGEQKSETIA 631



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 72/258 (27%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L   +         +    G+F  
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVLGSRELYETS-GHWNHYRDGMFPS 325

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 326 MEMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGTMHRYEMSGALSG 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA + +      E +  +  +  + +     L+    ++     +   + 
Sbjct: 379 LQRVRGMTLNDAHIFVRPDQIKEELK-RVVNLTLEVYKDFGLENYSFRLSYRDPEDTKKY 437

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +K      + +  +  +           G  L  +    +    ++   +   
Sbjct: 438 YADDEMWEKAQGMLKEAMDEMGLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLDF 497

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  + +  GE G   
Sbjct: 498 LLPERFELSYVGEDGKQH 515


>gi|315054053|ref|XP_003176401.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338247|gb|EFQ97449.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 765

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/482 (8%), Positives = 111/482 (23%), Gaps = 67/482 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  + +           +F 
Sbjct: 344 GCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNM--YDVGIWRQSGHWAHYKDDMFK 401

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+                              +R        F    + +
Sbjct: 402 L-DVEKRDWALKPMNCPG-------------HCIMFGHRERSYRELPLRMADFGVLHRNE 447

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I      +    R I         L    +  +
Sbjct: 448 ASGALHGLTRVRKFQQDDTHIFCTDNQIIGEIEGLFDFLRAIYGLFGFSFKLKLSTRPEK 507

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L  L   D  +    + +    G     + GD                +F    ++ ++
Sbjct: 508 YLGKLETWDFAEAQLREALTKFKGAEWEIDEGD---------------GAFYGPKIDITI 552

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  +                     ++         K+       +             
Sbjct: 553 SDALKR--------------EHQCATIQLDYQLPLNFKLEYMTGETIPKSAAPAAPQAPQ 598

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL-ESSTNN 371
                E                +    R +   +             + ++         
Sbjct: 599 AEAKPEGGSNSSQAQPSDSS--NPGPGRARPVMIHRAIIGSFERFFGILIEHFGGKWPFW 656

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +     +++  M   +D + + Q     LR   +  ++ L S      +++         
Sbjct: 657 LSPRQILIVPVMASANDYVEELQEI---LRGDKLNVDIDL-SGHTMQKKIRNGQLAQYNF 712

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             + G  E+    + I++                   ++     +P+ E  + ++ + +E
Sbjct: 713 IFVVGAQEKESRSVNIRNRDD--------------PSSQTKGSLVPLEEARAKLRALRKE 758

Query: 492 NK 493
            +
Sbjct: 759 RR 760


>gi|255020885|ref|ZP_05292941.1| Prolyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969676|gb|EET27182.1| Prolyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 572

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 51/159 (32%), Gaps = 12/159 (7%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            L  G        +R+  R+   +R   +  G   I   +++ ++ L +     +     
Sbjct: 34  RLASGLYTWLPLGLRVLRRVEQVVREEMDRSGAQEILMTVVQPAE-LWQESGRWELYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +   L     ++ + LAR    ++  +      Y+I   FR+E        
Sbjct: 93  LLRLKDRHQRDFCLGPTHEEVISDLARREIRSYRQLP--VNLYQIQTKFRDEIRPRFGLM 150

Query: 127 QFIQCDVDNVGSSAETA------DAEMCMMMADTLEAVG 159
           +  +  + +  S              M        + +G
Sbjct: 151 RAREFIMKDAYSFHMDQASLEEGYRAMYDAYCRVFQRLG 189


>gi|196033851|ref|ZP_03101262.1| threonyl-tRNA synthetase [Bacillus cereus W]
 gi|228945992|ref|ZP_04108333.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195993531|gb|EDX57488.1| threonyl-tRNA synthetase [Bacillus cereus W]
 gi|228813685|gb|EEM59965.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 639

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLTQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+
Sbjct: 575 DMRDEK-LGYKIREAQMQKVPYVVVIGDKEMENGAVNVR--KYGEEKSGVIE 623



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/257 (10%), Positives = 67/257 (26%), Gaps = 15/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      +  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------EYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDKLWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFN 270
           ++ E        EK   
Sbjct: 490 QMPEKFDLNYIDEKNEK 506


>gi|317131189|ref|YP_004090503.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469168|gb|ADU25772.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 645

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 76/236 (32%), Gaps = 15/236 (6%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +G  D +    K   L  +       +   D +K +    +  +         ++L
Sbjct: 398 EEEFKGCVDLANFMLKTVGLDEDVSYRFSKWDENDRDKYIGTSEQWEEVQDRMRNILDDL 457

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +       SG  +         +R +      +    + F +   K+  + +    G  
Sbjct: 458 GIQYT--EASGEAAFYGPKLDIQIRNVFGKEDTLITVQIDFQL--AKRFEMKYTDTDGQE 513

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y  ++             SIG     +AL   + +      + P  +  +       + 
Sbjct: 514 KYPYVIH----------RTSIGCYERTLALLIEKYAGAMPTWLAPEQVRVLPISEKHEAY 563

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   + LR AG+RA +    ++  G +++ A     P  ++ G  E   G + ++
Sbjct: 564 AQPVLEKLRAAGLRATVD-QRNEKIGYRIREAQLEKVPYMLVAGDREAEEGTVSVR 618


>gi|283457978|ref|YP_003362585.1| threonyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134000|dbj|BAI64765.1| threonyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 706

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/402 (10%), Positives = 99/402 (24%), Gaps = 35/402 (8%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
              +    RT  I   F+                      +               L+A+
Sbjct: 325 KREMEDYVRTRHIQEGFQYVSTPHISKEDLFYTSGHLPYYADGMFPPMELDNGHYRLKAM 384

Query: 159 GIKRNDYHIGINNRKILDG---ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
               ++       R   +      E   ++ D+K      + R            V    
Sbjct: 385 NCPMHNEIYRSRGRSYRELPLRFFEFGTVYRDEKSGVLQGLTRVRMITQDDSHSYVTKEQ 444

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVI 275
                 +   F           D  +   + D E    +  + +      E+    L  +
Sbjct: 445 APDEVRHLLKFMLSLLEDFGMTDFYLELSTRDTEG--DKKDKFIGTDEQWEEATAVLEQV 502

Query: 276 SEL--VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
           ++   +               I    +   G  ++        N+  +  +         
Sbjct: 503 AKETGLELVPDPGGAAFYGPKISVQAKDAIGRTWQMSTVQYDFNQPSRFGL--------E 554

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y       +   +  +     I R +  L    +       + PV +  +          
Sbjct: 555 YQAADGTVQEPVMIHSAKFGSIERFLGVLTEHYAGAFP-AWLAPVQVIGVPVAEAFNDYM 613

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 LR  G+R E+  GS + F  +++ A     P  +I G  +   G +  +     
Sbjct: 614 TEIADKLRAHGVRVEVDYGSDR-FTKKIRTASTEKVPFILIAGGEDAEHGAVSFR----- 667

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
                              +  +P+ E V+ + + ++    E
Sbjct: 668 -------------FRGNKQENGVPVDEAVARIVEHIRNRVNE 696


>gi|330975337|gb|EGH75403.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 571

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INLYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|307700804|ref|ZP_07637829.1| threonine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307613799|gb|EFN93043.1| threonine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 669

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 43/121 (35%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  +   + LR   +R E+     + FG +++ A +   P  +
Sbjct: 567 WLAPVQVRLVPVADTFNAYCEDVAKQLRAENVRVEIDESDDR-FGKKIRNAAKDKIPFTL 625

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +   G +  +    G++ +                  + IS  +  + + ++  K
Sbjct: 626 IVGGEDAEHGAVSFRY-RGGEQKNG-----------------VKISAAIQEITETIRSRK 667

Query: 494 E 494
            
Sbjct: 668 N 668


>gi|187776940|ref|ZP_02993413.1| hypothetical protein CLOSPO_00484 [Clostridium sporogenes ATCC
           15579]
 gi|187775599|gb|EDU39401.1| hypothetical protein CLOSPO_00484 [Clostridium sporogenes ATCC
           15579]
          Length = 635

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/365 (12%), Positives = 97/365 (26%), Gaps = 14/365 (3%)

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
              +R E    G         ++                M  T    G            
Sbjct: 277 ESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDGDYAIKPMNCPGG 336

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
             +    +         +L+E  IV R        GL  V+        D++  +     
Sbjct: 337 ILVYKNSMHSY-RDLPLRLSELGIVHRHELSGALHGLMRVR----CFTQDDAHLYMTKEQ 391

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           +  E + I+                EL            +  + +  +R+     + I  
Sbjct: 392 IKEEVVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLRE---ALDSIGK 448

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT-- 349
              +  G   + G   +  L   +    Q   +        R+D       G+       
Sbjct: 449 EYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEKHRPVMV 508

Query: 350 --GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                  + R I  L    +       + PV +  M+         +   + L+   IR 
Sbjct: 509 HRTIYGSVERFIGILIEQYAGAFP-TWLAPVQVKLMNITDSQYDYLKKVEETLKENNIRV 567

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E+    ++  G +++ A  +  P  +I G  E   G + ++    G   +  ++      
Sbjct: 568 EID-TRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKI 626

Query: 468 EARVA 472
           +  + 
Sbjct: 627 KNEIK 631



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  +   G+  I TPL+  +++L       D   + ++  
Sbjct: 261 GFPFFHPKGMIVRNILESFWREEHTKAGYQEIRTPLI-LNEALWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 319 TNIDDGDYAIKPMNCPG 335


>gi|153950997|ref|YP_001397450.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166223330|sp|A7H1S0|SYT_CAMJD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|152938443|gb|ABS43184.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 602

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 VGIVPIGEAHIAYAKEIQKELLELNIDSEVY-EKNESLSKKIRIAEKQKLPMILVLGDDE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 566 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600



 Score = 36.7 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R+++   +  I+   G++P+  P L  +D+  K         + ++  
Sbjct: 228 GLPIWLGNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKADA-WKISGHYANYKENMY-F 285

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q   ++      
Sbjct: 286 TQIDEQEYGIKPMNCVG 302


>gi|37524693|ref|NP_928037.1| prolyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|81834075|sp|Q7N8M7|SYP_PHOLL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|36784118|emb|CAE12987.1| prolyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 572

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     IR+  ++   +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYNWMPTGIRVLKKVEKIVREEMNNTGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGDRPFVLGP 108



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 31/110 (28%), Gaps = 3/110 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +     LR +GI         +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSYRVKEVAEKLYADLRASGIDVIFDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +    P  ++ G      G ++ K     ++   ++ N   + + +
Sbjct: 520 FADMELIGVPHTVVIGDRNLDNGEVEYKHRRNDEKQMLKLDNVVDYLKQQ 569


>gi|256825369|ref|YP_003149329.1| threonyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688762|gb|ACV06564.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Kytococcus
           sedentarius DSM 20547]
          Length = 660

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 45/121 (37%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D     +     +R  GIR E+     + F  +++ A +   P  +
Sbjct: 558 WLAPVQVLGVPVAEDFQPYLEDVLAQMRAQGIRTEIDASDDR-FPKKIRNASKSKVPFTL 616

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +R  G +  +    G + +                  +P+++ ++ +++ +    
Sbjct: 617 IAGGEDRDAGAVSFR-FRDGSQENG-----------------VPVADAIARIREAIDTRA 658

Query: 494 E 494
           +
Sbjct: 659 Q 659


>gi|86149734|ref|ZP_01067964.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85840002|gb|EAQ57261.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 602

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 VGIVPIGEAHIAYAKEIQKELLELNIDSEVY-EKNESLSKKIRTAEKQKLPMILVLGDDE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 566 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600


>gi|332030887|gb|EGI70523.1| Threonyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 714

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 22/129 (17%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 I     +++       D         Q L  AG+  E+ +  S     +++ A 
Sbjct: 602 GKWPYWISPRQAMVVPVASQFDD---YAFEVKQKLWDAGVMVEIDIDPSDTLNKKIRNAQ 658

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                  ++ G  ER+ G + I+                      V    + + EL++ +
Sbjct: 659 LAQFNFILVVGEKERNAGTVNIR------------------TRDNVVHGEMAVDELITKL 700

Query: 486 KKILQENKE 494
           K IL+E ++
Sbjct: 701 K-ILKETRD 708



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR+ Y   GF  + TP + ++  L +         + +FS  D +
Sbjct: 338 FQPRGAYIYNTLVDFIRSEYRKRGFQEVVTPNI-FNSKLWQTSGHWQHYAENMFSF-DVE 395

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 396 KETFALKPMNCPG 408


>gi|330968902|gb|EGH68968.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 571

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INLYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|326674558|ref|XP_002664809.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like, partial
           [Danio rerio]
          Length = 441

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 2/133 (1%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
              +G    ++A+ +          + P  +  +     S +  Q     LR AG  A++
Sbjct: 311 RAVLGSLERMIAILAENFGGKWPFWLSPAQVMVVPVGGSSEAYAQQVVSRLREAGFMADI 370

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                     +++ A         + G  E   G + ++    G+++ ++   +      
Sbjct: 371 DDDHGNTLNKKIRSAQLAQYNYIFVVGEKESECGTVSVRT-RAGQQIGQKTLEDVMKTLT 429

Query: 470 RVAQITIPISELV 482
           ++ + T    EL+
Sbjct: 430 QLTE-TRSNEELI 441



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 3/105 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N + D I++ Y   GF  + TP L +S +L +        ++ +FS+  + 
Sbjct: 66  FMPKGAHIYNTLTDFIKSEYRRRGFSEVVTPTL-FSTALWERSGHWQHYSENMFSVSSET 124

Query: 78  GQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHG 121
               +L+            +   +    P R    G + RNE  G
Sbjct: 125 -HTFALKPMNCPAHCVMFEQRLRSWREMPIRWADFGALHRNEASG 168


>gi|307941736|ref|ZP_07657091.1| ATP phosphoribosyltransferase regulatory subunit [Roseibium sp.
           TrichSKD4]
 gi|307775344|gb|EFO34550.1| ATP phosphoribosyltransferase regulatory subunit [Roseibium sp.
           TrichSKD4]
          Length = 378

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 5/138 (3%)

Query: 30  LDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTA 89
           +D +  +++  G  P+  P+L+ +D       ++ R  + ++     +G  + LR D T 
Sbjct: 7   IDKVMALFQAAGHHPVSPPILQPADIFLDLTGEDIR--RRLYLTTGANGVDLCLRPDFTI 64

Query: 90  PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCM 149
           P+ R   E    +  P      GPVFR    G G   Q               ADA+M  
Sbjct: 65  PVCRAHLE-AADMSIPTAYSYHGPVFRQRSDGLGEIPQIGAESFG--RDDRNAADADMLA 121

Query: 150 MMADTLEAVGIKRNDYHI 167
           +    L+  G   +D  I
Sbjct: 122 LSVKALDEFGTPASDIRI 139


>gi|288818602|ref|YP_003432950.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288788002|dbj|BAI69749.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308752193|gb|ADO45676.1| threonyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 637

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 40/99 (40%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      +   +     L+  G+R E+     +    +++ A+ +  P  I
Sbjct: 536 WLSPVQVRLIPIGEAHMDYTKKLENRLKEEGLRVEVDDRDER-LSAKIRDAEVQKIPYVI 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E S+G + ++   +G   S  ++      + ++ 
Sbjct: 595 VIGDKEVSQGKISVRSKKEGNLGSMSVEEFIKHIKDKIK 633


>gi|261338808|ref|ZP_05966666.1| hypothetical protein ENTCAN_05003 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318631|gb|EFC57569.1| proline--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 572

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   +  P+++ S+ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVLMPVVQPSE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRIADRGDRPFVLGP 108



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  G+   M     +  G  
Sbjct: 461 DERGIVWPDNIAPFQVAILPMNMHKSYRVQELAEKLYAELRAQGVDVLMDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 520 FADMELIGIPHTIVIGDRNLDSDEIEYKYRRSGEKQMIKTGDILDYL 566


>gi|307721910|ref|YP_003893050.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas
           autotrophica DSM 16294]
 gi|306980003|gb|ADN10038.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas
           autotrophica DSM 16294]
          Length = 602

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/365 (10%), Positives = 109/365 (29%), Gaps = 17/365 (4%)

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           F+  +       +  +    ++  ++         M    ++ +       +   + +  
Sbjct: 248 FKAHRKRGYEPVRGPEMLRSDLWMTSGHYQNYGENMYFTHIDELEFGVKPMNCVGHIKVY 307

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
            D +     L    K  E  +V R        GL  V+    +            A+   
Sbjct: 308 EDELHSYRDLPI--KYFEYGVVHRHEASGALHGLFRVREFTQDD-----AHIFCRADQIE 360

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           EQI  +V F+   +     +   ++        G +++  IS    K+  + N +     
Sbjct: 361 EQIIEVVDFVDKIMSTFEFDYKMMISTKPEKAVGDDKVWEISTQALKNAMDKNELAYEID 420

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPAT 349
              G  Y      +       +  + +                 Y+G  +      +   
Sbjct: 421 EGGGAFYGPKIDIKIT---DAIGREWQCGTVQLDFNLPERFKLEYNGEENDKIQPVMIHR 477

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                  R I  L    +    +  + P  +  +          ++ +  L      +E+
Sbjct: 478 AILGSFERFIGILTEHYAGEFPMF-VAPTQVAIVPVAETHKEYAKLLSDKLIDINADSEI 536

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +  +  +   +++ A++   P+ ++ G  E +   + I+D    ++ +   +      + 
Sbjct: 537 YAKND-SLNKRIRTAEKTRVPMIVVIGDEEIANKTVAIRDRRTREQYNLSEEEFLKLIQT 595

Query: 470 RVAQI 474
           ++ ++
Sbjct: 596 KINEV 600


>gi|301065031|ref|ZP_07205376.1| proline--tRNA ligase [delta proteobacterium NaphS2]
 gi|300440880|gb|EFK05300.1| proline--tRNA ligase [delta proteobacterium NaphS2]
          Length = 575

 Score = 61.4 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/253 (11%), Positives = 70/253 (27%), Gaps = 13/253 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        ++   ++ + +R      G   +  P ++ ++ L +     +  
Sbjct: 31  MIRKLTSGIYTYLPVGLKSIRKVENIVREEMNRAGAIEVLMPAVQPAE-LWQESGRWEYY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVFRNEK 119
            + +   +D   +   +     ++   L R       +    +      +R     R   
Sbjct: 90  GRELLRFKDRHDRDACMGPTHEEVITDLVRKEIHSYKQMPINLYQIQTKFRDEIRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F        D   + A  +   M        +  G+K   +     +   + G  
Sbjct: 150 MRGREFIMKDAYSFDVDEAGANRSYEAMYEAYERIFQRCGLK---FRAVEADSGTIGGSY 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQ--I 237
               +   D   ++++               VK        D +         T  Q  I
Sbjct: 207 SHEFMVLADSGEDQIVNCATCSYAANLERAEVKAEENMTPPDLNELMGLERVETPGQRTI 266

Query: 238 DIMVSFLSIDLEK 250
           D +  FL++  + 
Sbjct: 267 DEVAHFLNVTSQN 279



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           +   ++      + L  +GI A +     +  G +   AD    P+ I  G+     G +
Sbjct: 483 NDHVVNAADKIYEELMKSGIDALLDDRDERA-GVKFNDADLLGIPVRITVGSRGLKNGEV 541

Query: 446 QIKDLAKGKELSREIKNNE 464
           ++K  ++ +  +  + N  
Sbjct: 542 EVKLRSEAESFTVPLDNAA 560


>gi|331089982|ref|ZP_08338872.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|330402896|gb|EGG82462.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 641

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L       + L+ AGIRAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVKVLPISDKYLDYAGKVLEDLKEAGIRAEID-SRAEKIGYKIREAQMKKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E   G + ++    G E    ++      +  VA
Sbjct: 592 VVGAKEEEEGKVSVRSRFVGDEGQCGLEEFIEQIKEEVA 630



 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + ++N +LD  R I+   G+  I TP++  S  L +     D   + +++ 
Sbjct: 260 GFPFFLPNGMVLKNTLLDYWREIHRRAGYVEINTPIM-LSRHLWETSGHWDHYKENMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 V-VDEEDFAIKPMNCPG 334


>gi|312128091|ref|YP_003992965.1| threonyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778110|gb|ADQ07596.1| threonyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 639

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 75/262 (28%), Gaps = 6/262 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
             T +        +   ++I  ++  +         + +  +        G +E   ++E
Sbjct: 380 CFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFGFKYHVELSTRPEISMGTDEQWNMAE 439

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
              K       I        G  Y     +          +     +        R+D  
Sbjct: 440 TALKEALEEVGIDYKINEGDGAFYGPKIDFHLEDSLKRTWQ--CATIQLDFQMPERFDLY 497

Query: 338 VSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                G             G     +A+ +   +      + P  I  +    +      
Sbjct: 498 YIGEDGAKHRPVMLHRVVFGSIERFIAILTEHFAGAFPVWLAPTQIRVIPVSDNFNDYAA 557

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             +Q L+  G R E     S+  G +++ A  +  P  +I G  ER    + ++D  KG 
Sbjct: 558 KISQTLKENGFRVEEDY-RSETVGYKIRDAQLQKIPYMVIVGEKERRENTIAVRDRKKGD 616

Query: 455 ELSREIKNNESWREARVAQITI 476
             S  I    S  + +V +  I
Sbjct: 617 LGSFTIDKFVSMVKEKVEKKVI 638



 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  ++  G+  I+TP++   D   +     D   + ++  
Sbjct: 264 GFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLTKDLWVQS-GHWDHYKENMY-F 321

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q  +++      
Sbjct: 322 TKIDDQEFAIKPMNCPG 338


>gi|304409899|ref|ZP_07391518.1| prolyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302394|ref|ZP_07582152.1| prolyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304351308|gb|EFM15707.1| prolyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306914432|gb|EFN44853.1| prolyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 571

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       ++ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHNRDFVLGP 108



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AGI   +     +  G  
Sbjct: 460 DDRGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLNEAGIDVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      G+ + K+   G++          + +  V 
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLLDFLKNAVK 570


>gi|227504819|ref|ZP_03934868.1| prolyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198669|gb|EEI78717.1| prolyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 591

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 54/179 (30%), Gaps = 26/179 (14%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA------LKSLESSTNN 371
           E       G          ++     + VP  G        ++A                
Sbjct: 432 ELGHIFQLGRKYTKAFDVQILDENGKRAVPTMGSYGIGVSRMMAVLAEQQADEKGLRWPV 491

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D+ +L   Q   + L  AGI          + G + K A+    P 
Sbjct: 492 DVAPFQVHVAVANKDAAALEAGQKLVEDLDAAGIEVLFDDRPKVSPGVKFKDAELLGMPF 551

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
             I G    + G+++++ +  G+                   + +P  E+V  + ++++
Sbjct: 552 IAILGRS-FADGIIELR-IRGGE------------------TLEVPADEIVDKLLELVR 590



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R   +I + +R      G   +  P L   E  +   ++    D     +
Sbjct: 40  GVYTWLPLGLRTLTKIENIVREEMNAIGGQEMLFPALLPREPYELTDRWTEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G  + L  
Sbjct: 96  FRLKDRKGADMLLGP 110


>gi|322831614|ref|YP_004211641.1| prolyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321166815|gb|ADW72514.1| prolyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 572

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N     +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNANAIEVSMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 33/111 (29%), Gaps = 3/111 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +   + LR+ GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVKDAAEALYKELRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
               +    P  ++ G        L+ K+   G++   +  +   +  +++
Sbjct: 520 FADMELIGVPHQVVIGDRNLDAEELEYKNRRTGEKQMIKQSDIVEYLLSQI 570


>gi|237740439|ref|ZP_04570920.1| threonyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422456|gb|EEO37503.1| threonyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 637

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 42/102 (41%), Gaps = 2/102 (1%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  +  + + +   +     L+  GIRAE+    ++  G +++ A+ R   P
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMDKLQELGIRAELD-DRNETIGYKIREANGRYKIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + +I G  E     + I+      + S+ + +   +     A
Sbjct: 591 MQLIIGKNEVENKEVNIRRFGSKDQFSKSLDDFYDYVVDEAA 632



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K +  RN ++D  R  +E  G+  +ETP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPIMLNKE-LWEISGHWFNYRENMYT 317


>gi|227875460|ref|ZP_03993601.1| threonyl-tRNA synthetase [Mobiluncus mulieris ATCC 35243]
 gi|227844014|gb|EEJ54182.1| threonyl-tRNA synthetase [Mobiluncus mulieris ATCC 35243]
          Length = 692

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 43/121 (35%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  +   + LR   +R E+     + FG +++ A +   P  +
Sbjct: 590 WLAPVQVRLVPVADTFNAYCEDVAKQLRAENVRVEIDESDDR-FGKKIRNAAKDKIPFTL 648

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +   G +  +    G++ +                  + IS  +  + + ++  K
Sbjct: 649 IVGGEDAEHGAVSFRY-RGGEQKNG-----------------VKISAAIQEITETIRSRK 690

Query: 494 E 494
            
Sbjct: 691 N 691


>gi|239826651|ref|YP_002949275.1| prolyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511599|sp|C5D9C3|SYP_GEOSW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239806944|gb|ACS24009.1| prolyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 567

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 4/87 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++   IR      G   +  P L+ ++ L +           
Sbjct: 34  QSASGVYTFLPLGQRVLQKVEAIIREEMNRAGAIELLMPALQPAE-LWQQSGRWYSYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLAR 93
           +  L+D   +  +L     ++   L R
Sbjct: 93  LMRLKDRHERDFALGPTHEEIITALVR 119



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 46/124 (37%), Gaps = 20/124 (16%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              ++      LI+    + +       + + L  AG    ++    +  G +   +D  
Sbjct: 464 WPASVAPFHVHLISVNAKNEEQRQLADEWYEKLGQAGFEV-LYDDRPERAGVKFADSDLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P+ +  G    + G+++IK    G+                   + + + EL+ T+++
Sbjct: 523 GIPIRVTVGKR-ANEGIVEIKVRQTGE------------------SMEVSVDELIDTIRR 563

Query: 488 ILQE 491
           +LQ+
Sbjct: 564 LLQQ 567


>gi|297587908|ref|ZP_06946552.1| proline--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574597|gb|EFH93317.1| proline--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 576

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 80/308 (25%), Gaps = 12/308 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         RI  ++ + +R   +NYG   I  P+ +  +   +        
Sbjct: 31  MIRKTAAGLYSYLPLGYRIVRKVENIVREEMDNYGSQEIHMPVTQPREI-WEESGRWKTF 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              +F LQD + +   L         DL     +   +    I      YR     R   
Sbjct: 90  GPEMFKLQDRNNREFCLGPTAEEYFTDLVKGEIKSYKQLPLNIYQIQTKYRDEKRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
           +    F        D    +   A   M          +G+   +Y I   +   + G  
Sbjct: 150 NRSREFLMEDSYTFDVDEEAMREAYMNMWRAYEVVFNRLGL---EYKIVAGDSGAMGGNS 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
               +   D     +      D         V   + +   +             + I+ 
Sbjct: 207 SHEFIALSDVGEGVICYSDDSDFAATDEKAYVYYQVNDENVEKLPSEKVLTP-NCKTIEE 265

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  FL++D    +  +  +V+G         +  +    +                   L
Sbjct: 266 VSDFLNVDAAHCLKAVDLMVEGKPVIVFIPGDRELNMSKLVSYLKCPEHEIEMMEEKDIL 325

Query: 300 EYYTGCVY 307
              +   +
Sbjct: 326 ALNSSPGF 333


>gi|118479724|ref|YP_896875.1| threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118418949|gb|ABK87368.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Bacillus
           thuringiensis str. Al Hakam]
          Length = 646

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 93/337 (27%), Gaps = 23/337 (6%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M M   + +       +   +  N+      +  +I   G     
Sbjct: 312 TSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRY 371

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT------SEQIDIMVSFLS 245
           E    L  + ++    L    + +   +            L        E     +S+  
Sbjct: 372 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKDFGLENYSFRLSYRD 431

Query: 246 IDLEKSMHELYELV-KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +  K  +   E+  K     ++  +E+    +     G  +         VR       
Sbjct: 432 PEDTKKYYADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDE 489

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +    L F +    +   V               + +   +     S     +   ++ 
Sbjct: 490 TLSTVQLDFLLPERFELSYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEE 539

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            + +         V +  +      L   +     LR AGIR E+     K  G +++ A
Sbjct: 540 YKGAFPTWLAPVQVQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREA 597

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +  P  ++ G  E +   + ++    G++ S  I 
Sbjct: 598 QMQKIPYMLVVGDNEVTENGVNVR--KYGEQKSETIA 632



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 72/258 (27%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L   +         +    G+F  
Sbjct: 268 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVLGSRELYETS-GHWNHYRDGMFPS 326

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 327 MEMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGTMHRYEMSGALSG 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA + +      E +  +  +  + +     L+    ++     +   + 
Sbjct: 380 LQRVRGMTLNDAHIFVRPDQIKEELK-RVVNLTLEVYKDFGLENYSFRLSYRDPEDTKKY 438

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +K      + +  +  +           G  L  +    +    ++   +   
Sbjct: 439 YADDEMWEKAQGMLKEAMDEMGLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLDF 498

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  + +  GE G   
Sbjct: 499 LLPERFELSYVGEDGKQH 516


>gi|126175060|ref|YP_001051209.1| prolyl-tRNA synthetase [Shewanella baltica OS155]
 gi|166980155|sp|A3D6H7|SYP_SHEB5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|125998265|gb|ABN62340.1| prolyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 571

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       ++ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHNRDFVLGP 108



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 28/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AGI   +     +  G  
Sbjct: 460 DDRGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLNEAGIDVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      G+ + K+   G++            +  V 
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLLDLLKNAVK 570


>gi|292491210|ref|YP_003526649.1| prolyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579805|gb|ADE14262.1| prolyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 575

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 24/76 (31%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            L  G        +R+  ++   IR   +  G   I  P ++ ++ L +     ++    
Sbjct: 34  RLAAGLYTWLPLGLRVLRKVEGIIREEMDKAGAQEILMPAVQPAE-LWQETGRWEQYGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +    D   +      
Sbjct: 93  LLRFTDRHQRPFCFGP 108


>gi|325679048|ref|ZP_08158642.1| threonine--tRNA ligase [Ruminococcus albus 8]
 gi|324109172|gb|EGC03394.1| threonine--tRNA ligase [Ruminococcus albus 8]
          Length = 648

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 44/151 (29%), Gaps = 3/151 (1%)

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
            +      G    D          +  T        L + ++              V I 
Sbjct: 497 DMQIAKKFGMEYVDKDGKMKMPYIIHRTSVGCYERTLALLIEKYAGVLPLWLAPEQVRIL 556

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +    +         + +R  G+R E+  G   N G ++K A     P   I G  E  
Sbjct: 557 PI--KPEHNDYAYELAEEMRDLGMRVEVD-GEDDNIGPKIKQARFDRVPYMFIIGDNEVK 613

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVA 472
              + ++   +G+  +  + +  +  +  + 
Sbjct: 614 DRTVTVRSRKEGELPAMPVADAIAKLKEEID 644



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 5/81 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   I +     G+   +TP +   +   K     D    G+F L
Sbjct: 263 GLPILLPKGAKVIQTLQRWIEDEEYRRGYQLTKTPFMSKRELY-KISGHWDHYRDGMFIL 321

Query: 74  QDDDGQW---ISLRYDLTAPL 91
            D D +     +LR  +T P 
Sbjct: 322 GDPDDETKECFALRP-MTCPF 341


>gi|217972680|ref|YP_002357431.1| prolyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254782915|sp|B8EDD0|SYP_SHEB2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217497815|gb|ACK46008.1| prolyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 571

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       ++ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHNRDFVLGP 108



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AGI   +     +  G  
Sbjct: 460 DDRGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLNEAGIDVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      G+ + K+   G++          + +  V 
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLLDFLKNAVK 570


>gi|19114946|ref|NP_594034.1| mitochondrial threonine-tRNA ligase [Schizosaccharomyces pombe
           972h-]
 gi|3183172|sp|O13969|SYTM_SCHPO RecName: Full=Probable threonyl-tRNA synthetase, mitochondrial;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           Flags: Precursor
 gi|2330792|emb|CAB11266.1| mitochondrial threonine-tRNA ligase [Schizosaccharomyces pombe]
          Length = 473

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/443 (10%), Positives = 110/443 (24%), Gaps = 83/443 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI NR++D +R  Y+ +GF+ I TPL+   D   K         K +F ++   
Sbjct: 70  FLPHGTRIYNRLVDFLRAQYQIHGFEEIITPLIFKKDLWEKS-GHWQNYEKEIFRVE--- 125

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                                                                     + 
Sbjct: 126 -------------------------------------------ESRNVEDEHSNATYGLK 142

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                    +      + + + ++  D+     +R    G L  +           L   
Sbjct: 143 PMNCPGHCIVYASTERSYKELPLRFADFSP--LHRNEASGALSGLTR---------LRCF 191

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D       + +K  +    T     +      +   ++ +  +LS   E+ +  L  
Sbjct: 192 HQDDGHIFCSPESIKDEIKNTLTFVKQVY------SLLGMNKLKLYLSTRPEEHIGSLDT 245

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
             +      +   E      +    G                +++     +     P   
Sbjct: 246 WNEAENGLREALQESGETWIINEGDGAFYGPKIDVMVADARGKWHQTATIQLDFNLPQRF 305

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           +       G   G  +            +    F      + + ++ L            
Sbjct: 306 KLYYRTDAGDNAGSEKLIKQPVM-----IHRAIFGSLERFMGILIEHLNGHWPFWLSPRH 360

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIR-------------AEMFLGSSKNFGNQLKYA 424
            +I  ++     L+  +   + L    +               ++    +++ G +L+ +
Sbjct: 361 AVILPVNQTDRILTYAKQVQKELSNQEVNESEFLPLNKNTYYVDIN-AEAQSIGKRLRES 419

Query: 425 DRRNCPLAIIQGTGERSRGMLQI 447
              N    I+ G  E  + +L +
Sbjct: 420 RLLNYNYEIVIGEDEVDKEILSV 442


>gi|320590732|gb|EFX03175.1| threonyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 752

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 56/479 (11%), Positives = 126/479 (26%), Gaps = 51/479 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +RI N + + I + Y    +  + +P +  +D L +     +   + +F+L
Sbjct: 320 GSPFFLPHGMRIFNALKEFILSEYHKRDYVEVMSPNMFNAD-LWRTSGHWEHYQEDMFTL 378

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  QW +L+                              +R        F    + + 
Sbjct: 379 EVEKQQW-ALKPMNCPG-------------HCVIFGSRERSYRELPLRMAEFGILHRNEA 424

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               S        +        E   I      +    R +   +  K  L    +  + 
Sbjct: 425 SGALSGLTRVRRFIQDDSHIFCEEDQIGSEIRDLFDFLRTVYGKLGMKFRLKLSTRPEKY 484

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  L   DK +      ++    E   + S +   GA    +    ++  L         
Sbjct: 485 LGNLETWDKAEATLQHALEEFTKESGAEWSLNPGDGAFYGPKIDIQIMDALRRW------ 538

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                                    ++       +  +S               + +   
Sbjct: 539 --------------------HQCATLQLDFQLPQQFNLSYMTAASSNSDGKAEAKTVETK 578

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL--ESSTNN 371
           PV  E +                L   +    +          R I  L           
Sbjct: 579 PVEAETKDGKDDSKAVTASAAQTLAPGYSRPVMIHRAVLGSFERFIATLSEHFAGKWPFW 638

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +     +L+  M    D + + Q     L+  G   +  LG++     +++         
Sbjct: 639 LSPRQILLVPVMADAEDYVREVQKV---LKARGFYVDSDLGAN-TMNKKIRNGQVLQYNF 694

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT---IPISELVSTVKK 487
             + G+ E     + I+      +L+    +    R +R+ +     + +++L   VK 
Sbjct: 695 IFVLGSKEMQDRSVSIRVRDSKGDLTTLSLDVVVERLSRLRETKGLGLDLNDL-EEVKA 752


>gi|323487567|ref|ZP_08092859.1| hypothetical protein HMPREF9474_04610 [Clostridium symbiosum
           WAL-14163]
 gi|323399124|gb|EGA91530.1| hypothetical protein HMPREF9474_04610 [Clostridium symbiosum
           WAL-14163]
          Length = 653

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 54/469 (11%), Positives = 114/469 (24%), Gaps = 84/469 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G        ++I  R+   + ++ +N +G+   +TPL+  SD   K     D    G+F 
Sbjct: 261 GLPLLMPNGVKIVQRLQRWVEDLEDNEWGYIRTKTPLMAKSDLY-KISGHWDHYKDGMFV 319

Query: 73  LQDD--DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           L D+  D +  +LR  +T P   YV +N                        G       
Sbjct: 320 LGDEETDKEVFALRP-MTCPFQYYVYKNDQHSYRELPLRYSETSTLFRNEDSGE------ 372

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                                   L  V          I     ++  L        D  
Sbjct: 373 ---------------------MHGLTRVRQFTISEGHLIIRPDQVEEELAGCL----DLA 407

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
              L  L   D +     +       +   D          +    ++  V F   D E 
Sbjct: 408 VHCLTTLGLQDDVTYRLSKWDPDNREKYLGDEEYWEKTQGKIRDLLVEKNVPFTEADGEA 467

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           + +     ++      K    + +  +      ++   I  +   VR    +        
Sbjct: 468 AFYGPKIDIQAKNVYGKEDTMITIQLDCAIAENFDMYFIDQNGDKVRPYVIH-RTSMGCY 526

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                   ++    F +     +                                     
Sbjct: 527 ERTLAWLIEKYAGKFPTWLCPEQ------------------------------------- 549

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +  +       S      + L+  G+   +    S+  G +++       P
Sbjct: 550 ---------VRVLPISDKYESYAGEVAKELKKNGVFCSVD-NRSEKIGYKIRETRLDKIP 599

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
             ++ G  E +   + ++    G E  + +          +    I + 
Sbjct: 600 YMLVVGQQEEADKAVSVRSRFAGDEGVKPLGEFIEQICREIRTKEIRVE 648


>gi|303232046|ref|ZP_07318749.1| proline--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513152|gb|EFL55191.1| proline--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 572

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 41/153 (26%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I   IR   +  G   I  P+L+ ++   K     +     +  +
Sbjct: 38  GLYSFLPLGWRSIKKIEAIIREEMDRSGAQEIMMPILQPAEI-WKESGRWNAYGAEMMRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRFR 126
            D       L     ++   L +    ++  +          +R     R        F 
Sbjct: 97  NDRHDVEYCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D   ++A+ +   M    +      G
Sbjct: 157 MKDGYSFDIDDAAADVSYKNMYDAYSRIFTRCG 189



 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 1/106 (0%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I     V++     D   +S        L    +   +     +  G + K AD  
Sbjct: 467 WPRAIAPFEVVIVPINAKDEALMSTSTSIYDTLLNNKVDVLLDDRKDRA-GVKFKDADLI 525

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             PL I           ++I+    G+ ++  I    S  +  ++Q
Sbjct: 526 GYPLRITVSKNTLESNEVEIRVRKTGEAINCPIDEVSSKVQELLSQ 571


>gi|296327515|ref|ZP_06870061.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296155341|gb|EFG96112.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 637

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  +  + + +   +     L   GIRAE+    ++  G +++ A+ +   P
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMNKLEELGIRAELD-DRNETIGYKIREANGKYKIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           + +I G  E     + I+      + S+ +    ++    V + TI   
Sbjct: 591 MQLIIGKNEVENKEVNIRRFGSKDQFSKSLDEFYTYV---VDEATIKFD 636



 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + +RN ++D  R  +E  G+  +ETP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMIVRNVLIDLWRREHEKAGYQQLETPIMLNKE-LWEISGHWFNYRENMYT 317


>gi|163760291|ref|ZP_02167374.1| threonyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162282690|gb|EDQ32978.1| threonyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 668

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/392 (12%), Positives = 107/392 (27%), Gaps = 30/392 (7%)

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
              +     N+       +   +   +  G      +    +  A        +  D  I
Sbjct: 280 LAYMRRRLENDYEEVNAPQILDKSLWETSGHWGWYQENMFAVKSAHAFTNPDDEEADNRI 339

Query: 168 GINNRKILDGILEKI------GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
                    G ++              +L E   V R        GL  V+        D
Sbjct: 340 FALKPMNCPGHVQIFKHGLKSYRDLPVRLAEFGNVHRYEPSGALHGLMRVRA----FTQD 395

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG----EKGFNELVVISE 277
           ++  F     L +E + I    +S+  +    E+   +          +  ++    I  
Sbjct: 396 DAHVFCTEEQLEAECLKINDLMMSVYSDFGFEEVVVKLATRPEKRVGTDAMWDHAEDILR 455

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
            V       +  +I   I  G   + G  +E  L   +  + Q            R+   
Sbjct: 456 KVLDKMAAESGGRIKVGINEGEGTFYGPKFEYTLRDAIGRDWQCGTTQVDFNLPERFGAF 515

Query: 338 V-----SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                  + +   V           L + ++S             V++ T+  ++D    
Sbjct: 516 YIGADSEKKQPVMVHRAICGSLERFLGILIESHAGHMPLWFAPLQVVVATITSEADDYGA 575

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR----NCPLAIIQGTGERSRGMLQIK 448
                Q LR AG++ E    + K     + Y  R       P+ ++ G  E     + ++
Sbjct: 576 A--VAQRLRDAGLQVETDFRNEK-----INYKVREHSVAKVPVILVCGMREAEEQTVNVR 628

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISE 480
            L    ++S  + +  +          +    
Sbjct: 629 RLGSRDQVSMSLADAIAKLAEEATPPDVLRKN 660


>gi|300856610|ref|YP_003781594.1| threonyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436725|gb|ADK16492.1| threonyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 637

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 40/139 (28%), Gaps = 3/139 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + +  R ++   G+D I TP++   + L       D   + ++  
Sbjct: 261 GFPFFHPKGMIIRNELQNYWRQVHHKAGYDEIMTPIILNEE-LWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D +  +++          V +N                  +     G     ++   
Sbjct: 319 TKIDDEDYAIKPMNCPGSI-LVYKNKIHSYRDLPIRYGEMGIVHRHEKSGALHGLMRVRC 377

Query: 134 DNVGSSAETADAEMCMMMA 152
                +      +      
Sbjct: 378 FTQDDAHIFMTKDNMKDEI 396



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 75/255 (29%), Gaps = 7/255 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F    N+  E ++++    S           EL            +    +E ++
Sbjct: 381 DDAHIFMTKDNMKDEIVNVIKLIDSFYKVFKFEYFVELSTRPEDSMGSDEDWEAATEGLK 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                   + +   +  G   + G   +  L   +    Q   V        R+D     
Sbjct: 441 D---ALKAVGLDYKVNEGDGAFYGPKIDFHLKDSIGRTWQCGTVQLDFQMPERFDLTYVG 497

Query: 341 FKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             G+            G     + +     +      + PV +  M+             
Sbjct: 498 ADGEKHRPVMVHRVVFGSIERFIGILIENYAGAFPAWLAPVQVEVMNITDAQDDYVNEVV 557

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L+   IR E  +  ++  G +++ A  +  P  I+ G  E     + ++    G   +
Sbjct: 558 EKLKENDIRVESDM-RNEKIGYKIREAQMQKVPYMIVLGEKEMKDKTISVRSRKGGDMGT 616

Query: 458 REIKNNESWREARVA 472
             + +  S  +  + 
Sbjct: 617 MALDDFISKLKDEID 631


>gi|153001389|ref|YP_001367070.1| prolyl-tRNA synthetase [Shewanella baltica OS185]
 gi|166980156|sp|A6WQB8|SYP_SHEB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151366007|gb|ABS09007.1| prolyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 571

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       ++ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHNRDFVLGP 108



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AGI   +     +  G  
Sbjct: 460 DDRGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLNEAGIDVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      G+ + K+   G++          + +  V 
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLLDFLKNAVK 570


>gi|144899844|emb|CAM76708.1| prolyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 429

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 34/109 (31%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   +R   +  G   +  P ++ +D   +     D  
Sbjct: 31  MIRQSASGIYTWLPLGWKVLQKIEQIVREEQDAAGAQELLMPTIQSADI-WRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            K +  + D   + +       +L   + R   +++  +       +  
Sbjct: 90  GKEMLRIVDRHDREMLFGPTNEELITQIFRDNVKSYRELPKILYHIQWK 138



 Score = 40.6 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 30/95 (31%), Gaps = 1/95 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +      LI     D       +   + L   G+         +  G +    D 
Sbjct: 328 KWPEAVAPFKVGLINLKAGDGACDRVCEDMYRALSEQGVEVLYDDRDDRA-GVKFADMDL 386

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  ++ G    + G++++K+   G++    ++
Sbjct: 387 IGLPWQLVAGPKGVAAGLVELKNRHTGEKQELSVE 421


>gi|14601532|ref|NP_148072.1| glycyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|11387160|sp|Q9YBF8|SYG_AERPE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|5105327|dbj|BAA80640.1| glycyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 583

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 20/123 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +   +I  +  V++  +++D   + + +M  + L  AG     +   S + G +   AD 
Sbjct: 466 AFPRDIAPVQAVVLPLVENDEKLVERARMVYETLVEAGFTV--YYDDSGSIGRRYARADE 523

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P A+         G + ++D                WR     Q+ I   E+V  ++
Sbjct: 524 IGVPAAVTIDYQTLEDGTVTLRDRDT-------------WR-----QVRIGADEVVDKLR 565

Query: 487 KIL 489
           + +
Sbjct: 566 RFI 568


>gi|86153772|ref|ZP_01071975.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842733|gb|EAQ59945.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 602

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 VGIVPIGEAHIAYAKEIQKELLELNIDSEVY-EKNESLSKKIRIAEKQKLPMILVLGDDE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 566 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600


>gi|86151198|ref|ZP_01069413.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85841545|gb|EAQ58792.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 602

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 VGIVPIGEAHIAYAKEIQKELLELNIDSEVY-EKNESLSKKIRIAEKQKLPMILVLGDDE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 566 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600


>gi|312128280|ref|YP_003993154.1| prolyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778299|gb|ADQ07785.1| prolyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 572

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         R+  +I + +R   +  G   +    L   + L +  
Sbjct: 26  MLRSGFMR-QLSSGIYVYLPLGYRVLRKIENIVREEMDRSGAQEVHMSALMPKE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
                    +F ++D + +   L  
Sbjct: 84  GRWAVFGPEMFRIKDRNEREYCLGP 108



 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 2/108 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +     +++     D +         + L+  G+   +     +  G + K AD 
Sbjct: 461 IWPITVAPYEVIVVPVNVKDENQNKIAFEIYENLQKNGVEVLIDDRDERA-GVKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P  +  G    S G L+I++    +    EI+    +    + + 
Sbjct: 520 IGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIEKAIEFVMNLIKEE 566


>gi|296390688|ref|ZP_06880163.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 571

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRRLASGLYTWLPMGLRVLRKVETIVREEMNAAGALEVLMPAVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +  L+D   +   +     ++   LAR    ++  +          +R     R   
Sbjct: 90  GPELLRLKDRHEREFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRGREFIMKDAYSFHLSQDSLQQTYDGMYQAYSKIFSRLG 189


>gi|291550699|emb|CBL26961.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus
           torques L2-14]
          Length = 650

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 51/160 (31%), Gaps = 4/160 (2%)

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                   ++D       G           S+G     +A    + +      + P  + 
Sbjct: 490 QWDALLAEQFDMYYIDENGDKQRPYIIHRTSVGCYERTLAWLIEKYAGMFPTWLCPEQVR 549

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +                L+ A IR  +  G S+  G +++ A     P  +I G  E  
Sbjct: 550 VIPISDKYNDYAAKVEAQLKEANIRCSVD-GRSEKMGYKIREARLNRVPYLLIVGAKEEE 608

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + ++    G E S+++       +  +A+ TI   E+
Sbjct: 609 EQKVSVRSRYLGDEGSKDLGEFIEAIKDEIAKKTIRKIEV 648



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + I   +   I +     G+   +TPL+  SD   K     D   +G+F L
Sbjct: 260 GLPLIMPNGVIIMQELQRWIEDEEAKRGYIRTKTPLMAKSDLY-KISGHWDHYKEGMFVL 318

Query: 74  QD--DDGQWISLRYDLTAPLARYV--AENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            D   D +  +LR  +T P   YV  AE       P R      +FRNE  G   
Sbjct: 319 GDEEKDKEVFALRP-MTCPFQYYVYKAEQHSYRDLPLRYGETSTLFRNEDSGEMH 372


>gi|283955645|ref|ZP_06373138.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792870|gb|EFC31646.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 602

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 VGIVPIGEAHIAYAKEIQKELLELNIDSEVY-EKNESLSKKIRIAEKQKLPMILVLGDDE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 566 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600


>gi|254517592|ref|ZP_05129648.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911341|gb|EEH96542.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 645

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 68/234 (29%), Gaps = 7/234 (2%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E I+ ++S L ID + S          T               L++      + + I   
Sbjct: 405 ELINHIMSTLGIDGDISFRFSKWDPNNTDKYINNPEAWEETQVLMKAI---LDHLGIDYV 461

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---GF 351
              G   + G   +         E     +        R+D       G           
Sbjct: 462 EAEGEAAFYGPKLDIQFKNVHGKEDTIITIQIDFALAERFDMTYIDKDGNKKRPYIIHRS 521

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
           SIG     +A+   + +      + P     +          +   +  + +GIR     
Sbjct: 522 SIGCYERTLAMLIEKYAGAFPTWLAPTQAIVLPISDKYNDYAESIVKDFKDSGIRITADY 581

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            S K  G +++ A     P  ++ G  E +     ++    G+E +  +   ++
Sbjct: 582 RSEK-IGYKIREARLERIPYILVVGEKEAANNEASVRSRKNGEEGALPVSELKN 634



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   + +  E  G+   +TP +  +D   K     D    G+F L
Sbjct: 262 GLPLIMPKGAKIVQLLQRWVEDEEEKRGYVFTKTPSMSKNDLF-KVSGHWDHYKDGMFVL 320

Query: 74  --QDDDGQWISLRYDLTAPL 91
             +D D + ++LR  +T P 
Sbjct: 321 GDEDKDPEVMALRP-MTCPF 339


>gi|126667243|ref|ZP_01738216.1| prolyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628188|gb|EAZ98812.1| prolyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 576

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R  +++   +R   +  G   +  P ++ ++ L +     D     
Sbjct: 34  KLAAGLYTWLPMGLRTLHKVERIVREEMDRSGAQELLMPAVQPAE-LWRESGRWDEYGGE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +  + D  G+      
Sbjct: 93  LLRMNDRHGREFCFGP 108


>gi|15596153|ref|NP_249647.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107100413|ref|ZP_01364331.1| hypothetical protein PaerPA_01001438 [Pseudomonas aeruginosa PACS2]
 gi|218893073|ref|YP_002441942.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|81857350|sp|Q9I502|SYP_PSEAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701320|sp|B7UXX6|SYP_PSEA8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|9946862|gb|AAG04345.1|AE004529_11 prolyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|218773301|emb|CAW29113.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 571

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRRLASGLYTWLPMGLRVLRKVETIVREEMNAAGALEVLMPAVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +  L+D   +   +     ++   LAR    ++  +          +R     R   
Sbjct: 90  GPELLRLKDRHEREFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRGREFIMKDAYSFHLSQDSLQQTYDGMYQAYSKIFSRLG 189


>gi|116048881|ref|YP_792318.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|313105843|ref|ZP_07792106.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|122257988|sp|Q02IB8|SYP_PSEAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115584102|gb|ABJ10117.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310878608|gb|EFQ37202.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 571

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRRLASGLYTWLPMGLRVLRKVETIVREEMNAAGALEVLMPAVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +  L+D   +   +     ++   LAR    ++  +          +R     R   
Sbjct: 90  GPELLRLKDRHEREFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRGREFIMKDAYSFHLSQDSLQQTYDGMYQAYSKIFSRLG 189


>gi|332527863|ref|ZP_08403900.1| ATP phosphoribosyltransferase regulatory subunit [Rubrivivax
           benzoatilyticus JA2]
 gi|332112440|gb|EGJ12233.1| ATP phosphoribosyltransferase regulatory subunit [Rubrivivax
           benzoatilyticus JA2]
          Length = 381

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 76/390 (19%), Positives = 131/390 (33%), Gaps = 52/390 (13%)

Query: 17  DCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD 76
           D    + R    +   + +    YGF+ +  PLLE+ +SL      E       F L D 
Sbjct: 7   DVLPADARRIEELRRRLLDRARGYGFELVMPPLLEHLESLLSGTGRELDLK--TFKLVDQ 64

Query: 77  -DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
             G+ + +R D T   AR  A +        R    GPV      G    R+ +Q   + 
Sbjct: 65  LSGRTLGVRADTTPQAARIDA-HLLNREGVTRLCYCGPVLHTRPSGLNATREPLQFGAEI 123

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
            G +   AD E+  +  D L A   + ++  I + + +IL G+L    +           
Sbjct: 124 FGHAGLEADLEVAELALDCLHA--ARLSELTIDLADARILRGVLAGAPVDAAR------- 174

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID-LEKSMHE 254
                       LQ V   L E   D S      A L  E    + + L +   ++ +  
Sbjct: 175 ------------LQDVVAALSE--KDASALEALAAGLPDETRHGLRALLRLYGGDEVLAA 220

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
               +           +L   +  +R   +    I    + + G  YY+G  +       
Sbjct: 221 ARTELPQRSLITAAVEQLEWTARHLRA-AFPGLSIGFDLSDMSGYAYYSGLRFAVYGA-- 277

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
                       ++  GGRYD + + F  +N PA GFS+ +  L     ++ +       
Sbjct: 278 --------GSADALARGGRYDEVGAVFG-RNRPAVGFSLDLKALADLAPAVGAGRAIRAP 328

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
                      D+   +      + LR +G
Sbjct: 329 W--------GEDAALRAA----VRRLRESG 346


>gi|303228556|ref|ZP_07315384.1| proline--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516803|gb|EFL58717.1| proline--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 572

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 41/153 (26%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I   IR   +  G   I  P+L+ ++   K     +     +  +
Sbjct: 38  GLYSFLPLGWRSIKKIEAIIREEMDRSGAQEIMMPILQPAEI-WKESGRWNAYGAEMMRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRFR 126
            D       L     ++   L +    ++  +          +R     R        F 
Sbjct: 97  NDRHDVEYCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D   ++A+ +   M    +      G
Sbjct: 157 MKDGYSFDIDDAAADVSYKNMYDAYSRIFTRCG 189



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 1/107 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++     D   +S        L    +   +     +  G + K AD 
Sbjct: 466 IWPRAIAPFEVVIVPINAKDEALMSTSTSIYDTLLNNKVDVLLDDRKDRA-GVKFKDADL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              PL I           ++I+    G+ ++  I    +  +  ++Q
Sbjct: 525 IGYPLRITVSKNTLESNEVEIRVRKTGEAINCPIDEVSNKVQELLSQ 571


>gi|238019359|ref|ZP_04599785.1| hypothetical protein VEIDISOL_01223 [Veillonella dispar ATCC 17748]
 gi|237864058|gb|EEP65348.1| hypothetical protein VEIDISOL_01223 [Veillonella dispar ATCC 17748]
          Length = 572

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/247 (10%), Positives = 63/247 (25%), Gaps = 10/247 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G         R   +I   +R   +      I  P+L+ ++   K  
Sbjct: 26  MLRAGFMR-KTANGLYSFLPLGWRSIKKIEAIVREEMDRASAQEIMMPILQPAEI-WKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGP 113
              +     +  + D       L     ++   L +    ++  +          +R   
Sbjct: 84  GRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDER 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
             R        F        D   +  + +   M           G+             
Sbjct: 144 RPRYGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDAYTRIFTRCGLTFRPVEADSGAIG 203

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
              G  E + +    + +             + G  G+     E   + S   T  A+  
Sbjct: 204 G-SGTHEFMAIAEAGEADIVYCTKCDYAANIEIGKPGIMKQDEEALQELSVVDTPNASTI 262

Query: 234 SEQIDIM 240
            +  +++
Sbjct: 263 EDVAEML 269



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 1/99 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++     D   +S  Q     L+ AG+   +     +  G + K AD 
Sbjct: 466 IWPRAIAPFEAVIVPINAKDEALMSTSQTIYTALQDAGVDVLLDDRKDRA-GVKFKDADL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              PL I           ++I+    G+ ++  I +  +
Sbjct: 525 IGYPLRITVSKNTLENNEVEIQIRKSGEAITCAIDSVAT 563


>gi|160876111|ref|YP_001555427.1| prolyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189083513|sp|A9KVR8|SYP_SHEB9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160861633|gb|ABX50167.1| prolyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315268308|gb|ADT95161.1| prolyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 571

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       ++ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWVETGRWEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHNRDFVLGP 108



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AGI   +     +  G  
Sbjct: 460 DDRGIIWPEAIAPFSVGILPMNMHKSHRVTDIAEQLYKDLNEAGIDVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      G+ + K+   G++          + +  V 
Sbjct: 519 FADMELIGIPHTVVIGDRNIDAGVFEYKNRRTGEKQDIPFDQLLDFLKNAVK 570


>gi|57237210|ref|YP_178222.1| threonyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|73919779|sp|Q5HWW3|SYT_CAMJR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57166014|gb|AAW34793.1| threonyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315057643|gb|ADT71972.1| Threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 602

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 VGIVPIGEAHIAYAKEIQKELLELNIDSEVY-EKNESLSKKIRIAEKQKLPMILVLGDDE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 566 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600


>gi|88597312|ref|ZP_01100547.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218561885|ref|YP_002343664.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|73919778|sp|Q9PIS3|SYT_CAMJE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|88190373|gb|EAQ94347.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359591|emb|CAL34375.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284925497|gb|ADC27849.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315928137|gb|EFV07455.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 602

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 VGIVPIGEAHIAYAKEIQKELLELNIDSEVY-EKNESLSKKIRIAEKQKLPMILVLGDDE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 566 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600


>gi|323701857|ref|ZP_08113527.1| prolyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323533161|gb|EGB23030.1| prolyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 568

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 46/156 (29%), Gaps = 8/156 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+  +I + +R   +  G   +  P+++ ++   +           +F 
Sbjct: 37  SGIYTYLPLAQRVLKKIKEIVREEMDKQGGQELLMPIVQPAEMWLES-GRWHVYGPELFR 95

Query: 73  LQDDDGQWISLRY--D--LTAPL---ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           L+D   +   L    +  +T  +    R   +    +      +R     R        F
Sbjct: 96  LKDRHNRDFCLGPTHEEVITILVRGEVRSYKQMPLLLYQIQNKFRDERRPRFGLMRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                   D   +  + +  +M     +     G+K
Sbjct: 156 IMKDLYSFDRDEAGLDISYQKMYQAYTNVFNRCGLK 191



 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 19/124 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     ++I     D   +   +     L   G+   +   + +  G + K AD 
Sbjct: 462 IWPASIAPYHAIVIPVSAKDEKQMQLAESLYNKLNQIGVETVLDDRAER-PGVKFKDADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              PL I+ G    + G+++++    G +                    IP+ ++   VK
Sbjct: 521 IGYPLRIVVGNKAMTDGLVEVRQRKSG-QTDL-----------------IPLDQIPEKVK 562

Query: 487 KILQ 490
           +IL 
Sbjct: 563 EILA 566


>gi|257463827|ref|ZP_05628214.1| threonyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317061364|ref|ZP_07925849.1| threonyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687040|gb|EFS23875.1| threonyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 637

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 2/90 (2%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV I  +  + D +S  +   + L+  GIRAE+    S++ G +++ A+ R   P
Sbjct: 532 PMWLAPVQIKVLTINDDCVSYAKEIVEKLKEQGIRAELD-DRSESIGYKIREANGRYKIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           + +I G  E  +  + I+      + S ++
Sbjct: 591 MQVIIGKNEIEKKEVNIRRFGSQAQESMDL 620



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + +RN ++D  R  +E  G+  I+TP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMVLRNTLIDLWRAEHEKAGYVQIDTPIMLNRE-LWEISGHWFNYRENMYT 317


>gi|119774298|ref|YP_927038.1| prolyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|152016599|sp|A1S4R2|SYP_SHEAM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119766798|gb|ABL99368.1| prolyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 572

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 23/79 (29%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++  D L       D+ 
Sbjct: 31  MIRRNASGLYSYLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPGD-LWVETGRWDQF 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFTDRHNRDFVLGP 108



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 32/113 (28%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +   + L  AG    +F    +  G  
Sbjct: 460 DERGIVWPEAIAPFTVGILPMNMHKSHRVTDTAEALYKELTEAGFEV-LFDDRKERPGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  ++ G      G+ + K+   G++         S+ +A+  Q
Sbjct: 519 FADMELLGIPHTVVIGDRNIDTGVYEYKNRRTGEKTEVPFAELVSFLKAQFQQ 571


>gi|323692292|ref|ZP_08106531.1| threonyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323503617|gb|EGB19440.1| threonyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 653

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 54/469 (11%), Positives = 114/469 (24%), Gaps = 84/469 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G        ++I  R+   + ++ +N +G+   +TPL+  SD   K     D    G+F 
Sbjct: 261 GLPLLMPNGVKIVQRLQRWVEDLEDNEWGYIRTKTPLMAKSDLY-KISGHWDHYKDGMFV 319

Query: 73  LQDD--DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           L D+  D +  +LR  +T P   YV +N                        G       
Sbjct: 320 LGDEETDKEVFALRP-MTCPFQYYVYKNDQHSYRELPLRYSETSTLFRNEDSGE------ 372

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                                   L  V          I     ++  L        D  
Sbjct: 373 ---------------------MHGLTRVRQFTISEGHLIIRPDQVEEELAGCL----DLA 407

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
              L  L   D +     +       +   D          +    ++  V F   D E 
Sbjct: 408 VHCLTTLGLQDDVTYRLSKWDPDNREKYLGDEEYWEKTQGKIRDLLVEKNVPFTEADGEA 467

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           + +     ++      K    + +  +      ++   I  +   VR    +        
Sbjct: 468 AFYGPKIDIQAKNVYGKEDTMITIQLDCAIAENFDMYFIDQNGDKVRPYVIH-RTSMGCY 526

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                   ++    F +     +                                     
Sbjct: 527 ERTLAWLIEKYAGKFPTWLCPEQ------------------------------------- 549

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +  +       S      + L+  G+   +    S+  G +++       P
Sbjct: 550 ---------VRVLPISDKYESYAGEVAKELKKNGVFCSVD-NRSEKIGYKIRETRLDKIP 599

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
             ++ G  E +   + ++    G E  + +          +    I + 
Sbjct: 600 YMLVVGQQEEADKAVSVRSRFAGDEGVKPLGEFIEQICREIRTKEIRVE 648


>gi|317495533|ref|ZP_07953901.1| threonyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914347|gb|EFV35825.1| threonyl-tRNA synthetase [Gemella moribillum M424]
          Length = 647

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 39/121 (32%), Gaps = 2/121 (1%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             +   L+  +           V I  +++D       +   Q L+ AG++  +     +
Sbjct: 525 RMVAFLLEEYKGDLPTWLAPNQVRIIPVNNDY-HYDYSKEIMQELKKAGVKVAID-DRDE 582

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +++ A  +  P  ++ G  E     + ++      +        +      + +  
Sbjct: 583 KLGYKIREAANKKIPYTLVIGDKEVENKGVNVRTFGSHDQKEESFVEFKENILKEINERL 642

Query: 476 I 476
           I
Sbjct: 643 I 643


>gi|313683478|ref|YP_004061216.1| tRNA synthetase class ii (g h p and s) [Sulfuricurvum kujiense DSM
           16994]
 gi|313156338|gb|ADR35016.1| tRNA synthetase class II (G H P and S) [Sulfuricurvum kujiense DSM
           16994]
          Length = 281

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 6/118 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              E+P G         + +  I      +  + GF+ I TPL  Y   +          
Sbjct: 3   FEHEIPEGSKLYFAGAAKTKRLIETKASTLLSDAGFEEILTPLFSYHQHM------SVCD 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            + +  + D +   ISLR D T  + R V +         + + I PV+R       +
Sbjct: 57  QRELIRVNDSENHPISLRADSTIDVVRIVNKRLGGNTEHKKWFYIQPVYRYPADEQYQ 114


>gi|298252610|ref|ZP_06976404.1| prolyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532974|gb|EFH71858.1| prolyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 603

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 33/110 (30%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D  +    +   + L   GI          + G + K
Sbjct: 490 DDAGLAWPMAIAPAQVHVVATGKDQVAFDAAEKVVEELSKQGIEVIFDDRPKVSPGVKFK 549

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    PL  + G    + G ++I++       +  +    +   +RV 
Sbjct: 550 DAELVGVPLIAVAGRDTVNNGTIEIRNRDGSNVEAVPVDEAAARIVSRVN 599



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 8/88 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLG 57
           M +   +R   P G        +++ N++   IR+     G   +  P L   E  ++  
Sbjct: 24  MQRAGYIRKSAP-GVWTWLPLGLKVLNKVQAIIRDEINGIGAQEVHFPALLPREPYEATN 82

Query: 58  KFLPDEDRPNKGVFSLQDDDGQWISLRY 85
           ++    D     +F L+D       L  
Sbjct: 83  RWEEYGDN----IFRLKDRHQADYLLAP 106


>gi|330936741|gb|EGH40917.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 548

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 8   MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 66

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 67  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INLYQIQTKFRDEIRPRF 124

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 125 GLMRGREFVMKDAYSFH 141


>gi|327401820|ref|YP_004342659.1| threonyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327317328|gb|AEA47944.1| threonyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 615

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/275 (9%), Positives = 70/275 (25%), Gaps = 26/275 (9%)

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
           L +       +F     L+ E +  +     ++ E     +          ++  + LV 
Sbjct: 340 LTKDMEQAKQEFFNQYKLSVETLKEI----GLEPEDYEVAIRVTKDFYNENKEFVHSLVD 395

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
           + +          R                    A+    +  E  +      V   G  
Sbjct: 396 VLKKPILVEMWDQRFFYFVLKFEFNFVDALEKASALSTVQIDVENAERYDITYVNEKGEK 455

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +         +         +       K           + P  +  +      +    
Sbjct: 456 EHPFILHCSASGAIERCIYALLEKAYMEKEKGKLPMLPVWLSPTQVRIIPVSEKYVDYAI 515

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG--MLQIKDLAK 452
              + +   G+R ++     +  G +++ A     P   + G  E + G   + I+  + 
Sbjct: 516 EVAKKM--NGVRVDVD-DRDETLGKKIRDASMEWIPYIAVVGENEVNEGYLTVTIRSEST 572

Query: 453 -GKELSREIKNNESWREARVAQITIPISELVSTVK 486
             ++   ++                 + ELV  ++
Sbjct: 573 QKEQKRVKM----------------SVEELVERIR 591


>gi|294140027|ref|YP_003556005.1| prolyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326496|dbj|BAJ01227.1| prolyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 569

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 33/109 (30%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       ++ 
Sbjct: 31  MVRRNASGLYSWLPTGLRVLRKVEAIVREEMNKAGAVEILMPMVQPAD-LWIETGRWEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +   QD   +   L     ++   + R    ++  +       +  
Sbjct: 90  GPELLRFQDRHNRDFVLGPTHEEVITDIIRKEINSYKQLPLTLYQIQTK 138



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 31/109 (28%), Gaps = 3/109 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K   +   Q L  AGI   +F    +  G  
Sbjct: 460 DDRGIIWPKAIAPFTVGILPMNMHKSHRVKDIAEKLYQDLNDAGIEV-LFDDRKERPGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               +    P  ++ G      G+ + K+   G++          + ++
Sbjct: 519 FADMELVGLPHVVVIGDRNIDNGVFEYKNRRTGEKQEIPFDQLLDFLKS 567


>gi|125624939|ref|YP_001033422.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|166223350|sp|A2RN48|SYT_LACLM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|124493747|emb|CAL98736.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071738|gb|ADJ61138.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 646

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/459 (10%), Positives = 102/459 (22%), Gaps = 80/459 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A        IR  I   + +     G+  + TP                         
Sbjct: 262 GTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITP------------------------- 296

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                V  N +T                       +      D 
Sbjct: 297 ---------------------VMMNLNTYKQSGHWQHY---------HEDMYPPMDMGDG 326

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           + +        + + +          +       G+ +R    G L  +    +      
Sbjct: 327 EEMELRPMNCPSHIAIYKHHVHSYRELPIRIAEFGMMHRYEKSGALSGLQRVRE------ 380

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   D      L+ V+    +       D  +   +       +      D  K   
Sbjct: 381 ---MTLNDGHTFVMLEQVQEEFSK-ILQLIMDMYRDFGINDYSF-RLSYRDPKDTVKYFP 435

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +     K     +   +++    + V   G  +         V+        +    L F
Sbjct: 436 DDEMWEKSQAMLKATMDDMK--LDYVEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDF 493

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                               Y G         +   G    + R I  L  +        
Sbjct: 494 LNPENFDI-----------SYVGADGEKHRPVMIHRGVISTLERFIAYLIEVYKGAFPTW 542

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                      ++           + L+  G R  +   +++  G +++ +     P  I
Sbjct: 543 LAPTQATIIPVNNEIHADYAWKIQRELQDKGFRVVVD-EANEKMGWKIRQSQTHKIPYQI 601

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E++ G + I+     +      ++      A VA
Sbjct: 602 VIGDQEQADGTVNIRRYGSKETEVIPFEDFIEKISADVA 640


>gi|332981193|ref|YP_004462634.1| Ser-tRNA(Thr) hydrolase [Mahella australiensis 50-1 BON]
 gi|332698871|gb|AEE95812.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Mahella
           australiensis 50-1 BON]
          Length = 637

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +  +G++ I+TP++   +   +     D     ++  
Sbjct: 261 GFPFFHPKGMIIRNVLEDFWRKEHRKHGYEEIKTPIILNKELWIQS-GHWDHYKDNMY-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYV 95
              D Q  +++           
Sbjct: 319 TKIDDQDYAIKPMNCPGSMIMY 340



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +     SL   +     L    IR E+    ++  G +++ A     P  +
Sbjct: 534 WLAPVQVKILPITDRSLEYARSLQMHLEELDIRTELD-NRNEKIGYKIRAAQIEKVPYML 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E     + ++  +KG   S  + + E+  +  + 
Sbjct: 593 VIGDKEVENVAVSVRSRSKGDMGSMSVDDFENLIKTEIK 631


>gi|268316191|ref|YP_003289910.1| threonyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333725|gb|ACY47522.1| threonyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 662

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 54/462 (11%), Positives = 120/462 (25%), Gaps = 79/462 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +R  +++ +R      G+ P+                            
Sbjct: 271 GLPLWLPRGATLRETLINFLREEQIRRGYQPV---------------------------- 302

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                        +T  +AR             +  +  P+  N + G G   + + C  
Sbjct: 303 -------------VTPHIARLELYKTSGHYPYYKDSQFPPMIENPETGEGYLLKPMNC-- 347

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                            +   L   G               L G+    G   DD     
Sbjct: 348 -PHHIMIYADRPRSYRELPLRLAEFG-----QVYRYEQTGELSGLTRVRGFTIDDAHIFC 401

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  D++       + L L   R+    +F   A ++    +    ++  D      
Sbjct: 402 RP-----DQVKDEFKNVIDLTLYVFRSLGFDEF--EAQISLRDPNNREKYVGDDELWEQA 454

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E          G +   EL                  +   + R  +  T      +   
Sbjct: 455 EQAIREAAAEMGLQATEELGE-----AAFYGPKLDFMVRDALGRRWQLGT------VQLD 503

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            ++ E+      G+            + +   +    F      + V ++    +     
Sbjct: 504 YILPERFDLYYIGADN---------QKHRPVMIHRAPFGSLERFIGVLIEHCAGNFPLW- 553

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    +     +   + L  AG R E+    ++  G +++ A+ +  P  +
Sbjct: 554 -LAPVQVAVLPLSDELNDYAEAVGRRLLEAGFRVEVD-TRTETIGYKIRQAEVQKIPYML 611

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           I G  ER  G + ++   +G +    +          +   T
Sbjct: 612 IVGRREREAGTVAVRKHGEGDQGPATLDEFIERLRTEIEAAT 653


>gi|303310925|ref|XP_003065474.1| threonyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105136|gb|EER23329.1| threonyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034634|gb|EFW16577.1| threonyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 757

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/483 (9%), Positives = 110/483 (22%), Gaps = 74/483 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  L +     +     +F 
Sbjct: 341 GCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNM--YDVGLWRTSGHWNHYKDDMFK 398

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L  +  +  +L+                              +R        F    + +
Sbjct: 399 LAVEK-REWALKPMNCPG-------------HCIMFNHRERSYRELPLRMADFGVLHRNE 444

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I +    +    R I         L    +  +
Sbjct: 445 ASGALHGLTRVRKFQQDDTHIFCTEDQITQEIEGLFDFLRAIYGLFGFSFKLKLSTRPEK 504

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L  L   D  +    +    L     +D   D   GA    +    +   L  + + + 
Sbjct: 505 YLGKLETWDFAEAQLKE---ALTRFKGSDWEIDEGDGAFYGPKIDITIQDALKREFQCAT 561

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L   +      E   NE+                                        
Sbjct: 562 IQLDYQLPQNFKLEYMTNEIAKPKA----------------------------------P 587

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL--ESSTN 370
            P   E        S                  +          R    L          
Sbjct: 588 EPKKEESGPREGGDSKAADSDDGVPGPGRARPVMIHRAIIGSFERFFGILIEHFGGKWPF 647

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
            +     +++  M    D + + Q     LR   +  ++ +  +     +++        
Sbjct: 648 WLSPRQILIVPVMPAVYDYVEELQGI---LRGDKLNVDIDVSGN-TLQKKIRNGQLAQYN 703

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
              + G  E+    + I++                   ++     +P++E    ++ + +
Sbjct: 704 FIFVVGAQEKETRTVNIRNRDD--------------PSSQAKGSLVPLNEAREKLRALRK 749

Query: 491 ENK 493
           E +
Sbjct: 750 ERR 752


>gi|71418959|ref|XP_811024.1| threonyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70875641|gb|EAN89173.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 816

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/499 (9%), Positives = 123/499 (24%), Gaps = 40/499 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N +++  R  Y   GF+ + +P + +S  L       D+    +F +
Sbjct: 322 GSAFWLPHGARIYNALVEFQRKQYRRRGFEEVVSPNM-FSSKLWMVSGHWDKYADNMFRI 380

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHG------PGRFR 126
             +      ++           A    +    P R    G + RNE  G        R  
Sbjct: 381 VVEKEDH-GMKPMNCPGHCIMYAMQQHSYKELPIRYADFGVLHRNELSGALTGLTRVRRF 439

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR------------NDYHIGINNRKI 174
           Q     +       +       + + D    +G K                 +       
Sbjct: 440 QQDDAHIFCRMDQVQEEIRGALVFLDDVYRTLGFKFFLKHATRPENKLGTEEMWDQAEAY 499

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   L       +   +             +  ++ ++ LL +   +     T+      
Sbjct: 500 LRAALNSFCGIPEHLPDPFKEGATFTFDGRRDTVKKLRALLKKQAANRENKDTEKKEEKD 559

Query: 235 E--QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
           +  +          +         ++        +  ++   +            +  + 
Sbjct: 560 DEWKGPTHAEAWEENTGDGAFYGPKIDIVVEDALRRRHQCATVQLDFNLPQRFGLKYTLP 619

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL--------------V 338
           ++ V G        +      P +             G                      
Sbjct: 620 TSTVEGGAGAEAKEHHTDPNAPNVGTDATTTEGKPEAGDECLSSYEKAARELCIDRRLDA 679

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           ++ +   +    F      + +  +                +  +   +++ +       
Sbjct: 680 NQARPVMIHRAIFGSLERCIAILCEHYGGEWPLWLSPR--QVIVIPVSAENTAYATKVRD 737

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
                G  A++  G++     +++ A+        + G  E     + ++     +  ++
Sbjct: 738 AFYADGFHADVDSGNA-TLDKKIRNAEVARYNFIFVVGQVEEEAQTVNVRTRDNRRHGTK 796

Query: 459 EIKNNESWREARVAQITIP 477
            +   + W    V    + 
Sbjct: 797 SLAEVQRWLRELVDTYDLK 815


>gi|324998197|ref|ZP_08119309.1| prolyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 577

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 2/96 (2%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                       V +      ++ L   ++    L   G+   +      + G +   A+
Sbjct: 471 GLVWPRSVAPFDVHVVVAGKSAELLEGGEVLAAELEAEGLSVILD-DRKASPGVKFADAE 529

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
               P  ++ G    + G +++KD A G+       
Sbjct: 530 LVGVPTIVVVG-RGLADGKIELKDRATGERTEIPRD 564



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  RI + +R   +  G   I+ P L   E  ++  ++          +
Sbjct: 36  GVYSWLPLGLKVLRRIENVVREEMDAMGGQEIQFPALLPREPYEATNRWTE----YGPAL 91

Query: 71  FSLQDDDGQWISLRY 85
           F +QD  G    L  
Sbjct: 92  FRIQDRKGGDYLLGP 106


>gi|224476386|ref|YP_002633992.1| prolyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420993|emb|CAL27807.1| putative prolyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 566

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 73/252 (28%), Gaps = 7/252 (2%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N+I   +R   E+     I  P L+ S+ L +    
Sbjct: 28  KAGLIKQST-SGVYSYLPLATRVLNKITAIVREEMESIDAVEILMPALQPSE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            D     +  L D +G+  +L     ++   L R   +++  +       +         
Sbjct: 86  WDAYGSELMRLTDRNGRQFALGPTHEEVVTSLVRDEVKSYKQLPLTLFQIQSKFRDEKRP 145

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGI 178
                  +           + E +  E    M D    +  +   +    + +   + G 
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDETYNQMYDAYSRIFKRAGINARPVVADSGAIGGS 205

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
                +   +   + ++     D         V+    E   +   +  K     +    
Sbjct: 206 HTHEFMALSEIGEDTIVYSENSDYAANIEKAEVRFEPKEN-GEALLELEKVETPNAHTAQ 264

Query: 239 IMVSFLSIDLEK 250
            +  +L+  LE+
Sbjct: 265 EVADYLNRPLEQ 276



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 11/132 (8%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IG+SR + A+              ++      LIT      D           L+  
Sbjct: 439 CYGIGVSRTLSAIVEQNSDENGIVWPKSVTPFDLHLITINPKKDDQRELGDQIYAELQQ- 497

Query: 404 GIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
               E+     K   G +   AD    P+ I+ G      G++++K    G+    E+ N
Sbjct: 498 --SYEVLYDDRKERAGVKFNDADLIGLPIRIVVGKR-ADEGIVEVKRRDNGESEEVEVSN 554

Query: 463 NESWREARVAQI 474
             S+ +    QI
Sbjct: 555 LASYIDNLYTQI 566


>gi|260905197|ref|ZP_05913519.1| prolyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 615

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 11/100 (11%), Positives = 31/100 (31%), Gaps = 1/100 (1%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                       V I       +     +  T  L + G+   +      + G +   A+
Sbjct: 490 GLLWPQHLAPADVHIIAAGKGEEIAEAAEKLTAELESEGVSVLLDDRLKVSPGFKFADAE 549

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
               P  I+ G    + G++++++    ++    +    +
Sbjct: 550 LIGIPTVIVVG-RGLADGVVEVRNRLADEKQEVPVAEVVA 588



 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 2/79 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R   P G        +++  +I   +R      G   +  P L  +D   +     +  
Sbjct: 34  IRRSAP-GIYTWLPLGLQVLGKIEAIVREEMARAGSQEVHFPGLLPADPY-RKSGRWEAF 91

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F L+D       L  
Sbjct: 92  GPDLFHLKDRKDNDYILAP 110


>gi|32035109|ref|ZP_00135161.1| COG0442: Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209292|ref|YP_001054517.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|166980093|sp|A3N3C6|SYP_ACTP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126098084|gb|ABN74912.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
          Length = 571

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +    D   +   L     ++   L R    ++  +       +  
Sbjct: 84  GRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTK 138



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L+  G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G ++ K+   G++         ++ +  V 
Sbjct: 539 ANGEIEYKNRRTGEKQMIAKDQLLAFLKENVK 570


>gi|238063845|ref|ZP_04608554.1| threonyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885656|gb|EEP74484.1| threonyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 676

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D     + +   LR  GIRA++  G  +    +++ A ++  P  +
Sbjct: 568 WLAPVQVVGIPIREDHTDYLRGFVAALRAEGIRAQVDAGDDR-MQKKIRTAQQQKIPFMV 626

Query: 434 IQGTGERSRGMLQIKDLAKGKEL 456
           I G  + + G +  +    G + 
Sbjct: 627 IAGDDDVAAGTVSFRY-RDGSQR 648


>gi|171185199|ref|YP_001794118.1| threonyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|229558458|sp|B1YD09|SYT_THENV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|170934411|gb|ACB39672.1| Threonyl-tRNA synthetase editing domain protein [Thermoproteus
           neutrophilus V24Sta]
          Length = 609

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/138 (10%), Positives = 45/138 (32%), Gaps = 20/138 (14%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
            +   +   +   +    +      + PV +  +    D+L             GIR ++
Sbjct: 469 RYLYAVFDTLARAEKEGKAPRLPTWLSPVQVRIIPITRDNLKYAVEVADKFEAEGIRVDV 528

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                +    +++ A+    P   + G+ E + G++ +++   G                
Sbjct: 529 D-DRDETLSKRIRDAEVAWVPYICVVGSKEEAEGVVSVRERGGG---------------- 571

Query: 470 RVAQITIPISELVSTVKK 487
              Q  +   +L+  +++
Sbjct: 572 ---QYRVKPEDLIKKIRE 586


>gi|255730209|ref|XP_002550029.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240131986|gb|EER31544.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 455

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/459 (10%), Positives = 116/459 (25%), Gaps = 93/459 (20%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++  ++N    YGF  + TPL+ +   L K     D     +F +    
Sbjct: 55  FLPHGTRILNKLIQFMKNQQTKYGFQEVITPLI-FKTKLWKKSGHWDNYKDDMFKVV--- 110

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G  +S                                              I+     + 
Sbjct: 111 GNDLS---------------------------------------KEEHTDNIEEHEYGLK 131

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                +   +      + + + I+ +D+     +R    G L  +      + ++    +
Sbjct: 132 PMNCPSHCMIFAKFDRSYQELPIRYSDFSS--LHRNEASGALSGLTRV--RRFHQDDGHI 187

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
                     ++    L+ +                   ID +  +LS   E+      +
Sbjct: 188 FCSMSQIDQEIKNTLTLIKDTYKVFG-------------IDDIEFYLSTRPEE------K 228

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            +       K  ++L  +       G  S R    +     ++      +        + 
Sbjct: 229 YIGDIETWNKAEDQLKNVLNSTAGEGQWSIREGDGAFYGPKIDVLLKDAFGKKHQVGTIQ 288

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
              +      +   G         +   V    +        + L   +           
Sbjct: 289 LDFQLPNRFELKYVGE--DGNRDHQPILVHRAVYGSLERFFAILLDHYQGKWPFWINPRQ 346

Query: 378 VLITTMDHDSDSLSKYQMYTQM--------------LRTAGIRAEMFLGSSKNFGNQLKY 423
            +I  ++     +   +   Q               L +     ++     +  G + K 
Sbjct: 347 AIIIPIN--ESHVQAAESLQQKLGGDLLNSDESIAPLTSYNFYVDID-KRGETIGARTKE 403

Query: 424 ADRRNCPLAIIQGTGERSRGML--------QIKDLAKGK 454
           A ++     I+ G  E + G          ++K++   +
Sbjct: 404 AIQKGYSYIILIGDKEITNGTFAVRTRDDRKVKNMTSEE 442


>gi|83951533|ref|ZP_00960265.1| ATP phosphoribosyltransferase regulatory subunit [Roseovarius
           nubinhibens ISM]
 gi|83836539|gb|EAP75836.1| ATP phosphoribosyltransferase regulatory subunit [Roseovarius
           nubinhibens ISM]
          Length = 361

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 109/340 (32%), Gaps = 48/340 (14%)

Query: 32  SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL 91
            +R  +E  G  P+ET +L+ + +L     ++ R    + S      Q   LR D T P+
Sbjct: 13  RLRGQFEAAGALPVETAVLQPAGTLLDLYGEDIRARAYITSDALRGEQM--LRPDFTVPV 70

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA-ETADAEMCMM 150
              V  +      P R    G VFR ++    R  ++IQ   +         +DAE+   
Sbjct: 71  ---VQMHMAHGAEPARYTYAGEVFRRQEDDADRANEYIQVGFEIFARDDAARSDAEVFST 127

Query: 151 MADTLEAVGIKRNDY----------------------HIGINNRKILDGILEKI------ 182
               L  +G++                             I   +    ++E+       
Sbjct: 128 FHALLAPLGLQPATGDIGILMAAVDGLETSERRKAALRRHIWRPRRFRALIERFSGRAPV 187

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                + L  +  +  A   +   G + V   +   R D +        L+   + ++ +
Sbjct: 188 PASRAELLAAKDPMAAAGPMIGLRGPEEVAARIAALREDAAM-----PPLSENDVALIEA 242

Query: 243 FLSIDL--EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            L++    E ++ +L ++     A            E +   G ++  +   ++  R   
Sbjct: 243 LLAVRGASEDALEQLRDIAVDLPAIAPAVTRFAARLEAIGAQGIDAAALPFEASYGR--- 299

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                  E   GF              V  GGRYD L  +
Sbjct: 300 ----TQMEYYDGFVFGFTAPGRPDLPPVATGGRYDALTRQ 335


>gi|332708267|ref|ZP_08428248.1| threonyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352932|gb|EGJ32491.1| threonyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 605

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 3/129 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        + ++                +  +      L   Q     +R+ GIR
Sbjct: 478 HRAPFGSLERLTGILIEQYGGDFPFWLAPVQARLLPVG--DAQLPFAQEVAAKMRSHGIR 535

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE+   S +  G  ++ A++   P+  + G  E     L I+  A G+     I      
Sbjct: 536 AEVD-TSGERLGKAIRNAEKAKIPVMSVVGAKEVEANSLNIRTRAAGELGMMPIDQVVEK 594

Query: 467 REARVAQIT 475
            E       
Sbjct: 595 MEQANRNRE 603



 Score = 37.1 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   +R  + D ++      G+ P+ TP +   D   K         + +F
Sbjct: 219 GLPLWTPKGTVLRTLLEDFLKQEQVKRGYLPVVTPHIGRVDLF-KVSGHWQNYKEDMF 275


>gi|269123109|ref|YP_003305686.1| prolyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314435|gb|ACZ00809.1| prolyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 574

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 43/160 (26%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L RG        +++  +I + +R          I  P+L+ +D L +        
Sbjct: 31  MIKQLTRGVYTYLPLGLKVLKKIENIVREELNKINAQEILMPVLQPAD-LWQESGRWFSY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  L D + +   L     ++   L R +  ++  +       +             
Sbjct: 90  GAELMRLHDRNNRDFVLGPTHEEVIVDLFRNIVTSYKDLPLNVYQIQTKFRDERRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F               +    ++        E  G
Sbjct: 150 MRGREFIMKDAYSFHLTQECLDREYNKVKEAYCKIFERCG 189



 Score = 41.0 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I      LI     D  +    +     +    I   ++    +  G + K AD 
Sbjct: 469 IWPKSIAPYLVDLILVNVKDEIAKEVSEKIYSDMLLNNIDV-IYDDRDEKAGFKFKDADL 527

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              PL +I G G    GM++IK                           I + +++S +K
Sbjct: 528 IGIPLKVIVGKGAV-NGMVEIKH------------------RDGSFSGEIKVEDVISYIK 568

Query: 487 KILQENK 493
           +  ++NK
Sbjct: 569 EF-EKNK 574


>gi|300741607|ref|ZP_07071628.1| threonine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380792|gb|EFJ77354.1| threonine--tRNA ligase [Rothia dentocariosa M567]
          Length = 677

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 1/89 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                LR  G+R E+  GS + F  +++ A     P  +
Sbjct: 566 WLSPVQVICVPVAEAFNDYMTEIADKLREQGVRVEVDYGSDR-FTKKIRTASTEKVPFIL 624

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKN 462
           I G  +   G +  +     +E    +  
Sbjct: 625 IAGGEDAEAGAVSFRFRGNKQENGVPVDE 653


>gi|229060032|ref|ZP_04197403.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228719251|gb|EEL70859.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 639

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/404 (10%), Positives = 105/404 (25%), Gaps = 26/404 (6%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
             +E    + F     +I            +     Q        + E  +         
Sbjct: 258 MFSEEAPGMPFYLPKGQIIRNELEAFLRGIQNEYNYQEVRTPFMMNQELWEKSGHWGHYK 317

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN-ERLIVLRAIDKLDKFGLQGVK 212
                    +              ++ K  LH   +L        +         L G+ 
Sbjct: 318 DNMYFSEVDHKSFALKPMNCPGHMLMFKYKLHSYRELPIRMCEFGQVHRHEFSGALNGLL 377

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
            +    + D             ++I  +++ +    +    E    +        G ++L
Sbjct: 378 RVRTFCQDDAH--LFVTPEQIEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKL 435

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVG 329
              +E   ++  +S   K       G  Y     +         ++              
Sbjct: 436 WKQAEAALENVLHSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKF 495

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
                D    + +   +           L + ++    +         V +  +  ++  
Sbjct: 496 DLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVH 554

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           +         L  AGIR E  +   K  G +++ A  +  P  ++ G  E     + I+ 
Sbjct: 555 VEYANEVADKLAQAGIRVERDIRDEK-LGYKIREAQMQKVPYVLVIGDKEMESEAVNIR- 612

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
              G+E S                  + +   V+++++ +++ K
Sbjct: 613 -KYGEEKS----------------EVVALDVFVASIEEEIKDKK 639



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I   Y +  + TP +   +   K           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLRGIQNEYNYQEVRTPFMMNQELWEKS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +     +   +YR  P+   E     R   
Sbjct: 323 SEVDHKSFALKPMNCPG-------HMLMFKYKLHSYRELPIRMCEFGQVHRHEF 369


>gi|165977268|ref|YP_001652861.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|226731422|sp|B0BT03|SYP_ACTPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|165877369|gb|ABY70417.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 571

 Score = 61.0 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +    D   +   L     ++   L R    ++  +       +  
Sbjct: 84  GRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQTQTK 138



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L+  G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G ++ K+   G++         ++ +  V 
Sbjct: 539 ANGEIEYKNRRTGEKQMIAKDQLLAFLKENVK 570


>gi|190151185|ref|YP_001969710.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307264534|ref|ZP_07546118.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|226731421|sp|B3GZ82|SYP_ACTP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189916316|gb|ACE62568.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306870133|gb|EFN01893.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 571

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +    D   +   L     ++   L R    ++  +       +  
Sbjct: 84  GRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTK 138



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/142 (9%), Positives = 38/142 (26%), Gaps = 5/142 (3%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD----SDSL 390
           D              G +  ++  I              E+ P  +  +  +        
Sbjct: 430 DDGKPLVMTMGCYGIGVTRVVAAAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSESVQ 489

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +   + L+  G+         +  G      +    P  ++ G    + G ++ K+ 
Sbjct: 490 QFSEELYRTLKAQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNLANGEIEYKNR 548

Query: 451 AKGKELSREIKNNESWREARVA 472
             G++         ++ +  V 
Sbjct: 549 RTGEKQMIAKDQLLAFLKENVK 570


>gi|57506155|ref|ZP_00372076.1| threonyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57015550|gb|EAL52343.1| threonyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 602

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P+ +  +      L+  +   + L   G+ +E++   +++   +++ A+++  P+ ++ G
Sbjct: 504 PIQVGIVPISEVHLAYAKGIQRTLLEMGVDSEIY-DKNESLSKKIRNAEKQKLPMILVIG 562

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             E S   + ++D    ++ S  +    +  + ++ ++
Sbjct: 563 DEELSNRAVALRDRRAKEQKSLSLDEFMNLIKEKINEV 600


>gi|17227831|ref|NP_484379.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|17129680|dbj|BAB72293.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 615

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      L   +     LR+ GIRAE+     +  G  ++ A++   P+  
Sbjct: 513 WLAPVQARLLPVGEAQLDFTKDVVAKLRSLGIRAEVDTSGDR-LGKLIRNAEKDKIPVMA 571

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     L I+  A G+  +  +       +  +A   
Sbjct: 572 VVGAKEVETNSLSIRTRASGELGAIPVDEVVQKMKDAIANYE 613



 Score = 36.7 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ +   ++      G+ P+ TP +   D   K      +  + +F L
Sbjct: 229 GLPLWTPKGTLLRSTLEQFLQQEQLKRGYLPVVTPHIARVDLF-KTSGHWQKYKEDMFPL 287

Query: 74  Q 74
            
Sbjct: 288 M 288


>gi|302391162|ref|YP_003826982.1| prolyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203239|gb|ADL11917.1| prolyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 569

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 75/260 (28%), Gaps = 13/260 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         ++  ++ D IR      G   +  P L+ ++ L K  
Sbjct: 26  MLRAGLMR-KLGSGIYSHLPLGYKVIQKVEDIIREEMNKAGAQEVLLPALQPAE-LWKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGP 113
                    +  L+D   +   L         DL     R   +    +      +R   
Sbjct: 84  NRWADYGPELMRLEDRHKRDFCLGPTHEEVITDLIKDEVRSYKDLPFNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
             R        F        +    S + +  +M     +  +  G+   D+   + +  
Sbjct: 144 RPRFGVLRSREFIMKDAYSFNPDKESLDESYEKMYDSYVEIFDRCGL---DFRTVVADNG 200

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            + G      +   D   + ++     D      L    +       D   +  K     
Sbjct: 201 PIGGTDSHEFMVLADSGEDTVVFCSECDYSANLELADSDIEFT-TTDDKPQELEKVETPG 259

Query: 234 SEQIDIMVSFLSIDLEKSMH 253
           ++ I+ +  F +   +K + 
Sbjct: 260 ADTIEDLAEFFNCSTKKLLK 279



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 19/128 (14%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                       V I  + +D +     +     L   G+ A ++   S+  G +   AD
Sbjct: 461 GIIWPKSIAPYSVHIMQLGNDEEIKRVSEDLYTALNQTGLEA-LYDDRSERAGVKFNDAD 519

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
              CP+ +I G        L+IK     ++L     N                   V  +
Sbjct: 520 LIGCPIQVIIGKNSLEDNKLEIKLRQTDEKLKINADNP------------------VPKI 561

Query: 486 KKILQENK 493
           K++L +  
Sbjct: 562 KELLAKQN 569


>gi|157371993|ref|YP_001479982.1| prolyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980154|sp|A8GIB4|SYP_SERP5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157323757|gb|ABV42854.1| prolyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 572

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N     +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNANAIEVCMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGDRPFVLGP 108



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ--MYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       +         LR+ GI   +     +  G  
Sbjct: 461 DERGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYNTLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P +I+ G        ++ K+   G++   +      +   ++ 
Sbjct: 520 FADMELIGVPHSIVIGDRNLDSEEIEYKNRRVGEKQMIKTGEVIDFLLGQIK 571


>gi|328876049|gb|EGG24413.1| threonyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 786

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 82/343 (23%), Gaps = 17/343 (4%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           G  R R + +    N+ S      +       D + +       Y +   N      +  
Sbjct: 418 GEYRRRGYQEVITPNIYSQKLWEVSGHWQNYKDNMFSFQCDHTTYSLKPMNCPGHCLMYA 477

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                  +                   L G+  +    + D         +   E++   
Sbjct: 478 HRVRSYKELPMRYADFGVLHRNETHGSLTGLTRVRRFQQDDAH--IFCRTDQIEEEMRAC 535

Query: 241 VSFLS---------IDLEKSMHELYELVKGTIAGEKGFNELVVISEL----VRKSGYNSN 287
           + FL            LE S       +       +  N L  +         +      
Sbjct: 536 LDFLQYVYRVFGFTFSLELSTRPKEGYLGDLDTWNRAENALEQVLNESFRGHWRLNEGDG 595

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
                   +   +        A +       ++  + F + G     D           P
Sbjct: 596 AFYGPKIDIHIKDANGRSHQCATIQLDFQLPQRFNLEFTTSGVAETDDPSALAPSKFERP 655

Query: 348 AT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
                   G +  ++A+    +       + P  +             +   Q L  AG 
Sbjct: 656 VMIHRAIFGSTERMLAILIEHTKGKWPFWLSPRQVLVTSIGDAHNEYAEKIRQDLHLAGY 715

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             ++   + K    +L+ A        I+ G  E +   + ++
Sbjct: 716 EVDIDTSAHKTIKKKLRDAIILKYNYVIVVGNEEVTNNTVSVR 758


>gi|294673346|ref|YP_003573962.1| threonine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474289|gb|ADE83678.1| threonine--tRNA ligase [Prevotella ruminicola 23]
          Length = 648

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/352 (11%), Positives = 94/352 (26%), Gaps = 18/352 (5%)

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
            +  + +     + +  E  +  +  M       +   +   +  +  R    G + +  
Sbjct: 312 HYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEIFAWKPRSYRDLPLRIAEFGTVYRYE 371

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
             G+     R+      D         VK        D  G          E    +   
Sbjct: 372 QSGELHGLTRVRSFTQDDAHLFCRPDQVKQEFLNVM-DIIGIVLTAFGFNFEAQISLRDP 430

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              D      E + L +  I        L    E    + Y   ++        G  +  
Sbjct: 431 NDHDKYVGTDEDWALAEKAIVEACQEKGLPAKVEYGEAAFYGP-KLDFMIKDAIGRRWQL 489

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G +          N +               D    +     +    F        V ++
Sbjct: 490 GTIQVDYNLPKRFNLEYT-------------DEDNQKKTPVMIHRAPFGSMERFCAVLIE 536

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                           +  +          Q   +     G+RA + +  ++  G +++ 
Sbjct: 537 HTSGHFPLWLTPDQ--VAILPLSEKYNDYAQEVAKKFDMGGVRATVDM-RNEKLGRKIRD 593

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            + +  P  +I G  E + G + ++    G++  + I+       ARVA++T
Sbjct: 594 NELKRIPYMVIVGEKEAAEGTVAVRPQGGGEQSVKTIQEFIDEVNARVAEMT 645



 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           +G      K   +R R+ D +R + + +G+  + TP +   +      
Sbjct: 264 KGLPIWLPKGTELRLRLQDHLRKVQKRFGYQEVITPHIGSKNLYVTSG 311


>gi|296108860|ref|YP_003615809.1| glycyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295433674|gb|ADG12845.1| glycyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 570

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 2/94 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  + +        +    MLR   I AE     S   G +   AD    P  I     
Sbjct: 477 YVFPLVNREGMPELAKRIRDMLRENKIIAE--YDDSGAIGRRYMRADEIGVPFCITVDGQ 534

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                 + ++D    ++   +I+    +  ++++
Sbjct: 535 TLKDNTVTVRDRNTREQERVKIEELVDYLRSKIS 568



 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++N I++  R  +    GF  IE+P +   + L    
Sbjct: 29 GFVDYGPLGCLLKNNIINKFRERFIVKEGFYEIESPTVTPYEVLKASG 76


>gi|237800208|ref|ZP_04588669.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023065|gb|EGI03122.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 571

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|307257929|ref|ZP_07539683.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306863576|gb|EFM95505.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 571

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +    D   +   L     ++   L R    ++  +       +  
Sbjct: 84  GRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTK 138



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L+  G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G ++ K+   G++         ++ +  V 
Sbjct: 539 ANGEIEYKNRRTGEKQMIAKDQLLAFLKENVK 570


>gi|163788630|ref|ZP_02183075.1| N-acetylmuramic acid-6-phosphate etherase [Flavobacteriales
           bacterium ALC-1]
 gi|159875867|gb|EDP69926.1| N-acetylmuramic acid-6-phosphate etherase [Flavobacteriales
           bacterium ALC-1]
          Length = 646

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 55/479 (11%), Positives = 128/479 (26%), Gaps = 98/479 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R R+ + ++   +  G++ + TP                   K ++  
Sbjct: 261 GLPLWLPKGAALRERLENFLKAAQKKAGYEMVVTPH---------------IGQKELY-- 303

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                        +T+    + A+  +    P +                  ++  +  +
Sbjct: 304 -------------VTSG---HYAKYGEDSFQPIK----------------TPKEDEEFLL 331

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +                  L     +    +    +   L G+    G   DD     
Sbjct: 332 KPMNCPHHCEIYNNKPYSYKELPKRFAEFGTVYRYEQS-GELHGLTRVRGFTQDDAHIFC 390

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  D+LD    + + L+L    +    DFT   +L   +            ++   
Sbjct: 391 TP-----DQLDAEFKEVIDLVLYVFGSLGFEDFTAQVSLRDPESPD-----KYIGDEEHW 440

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  E      A +KG N +V   E             +   + R  +  T    +     
Sbjct: 441 KKAEDAILNAAIDKGLNYVVETGE--AAFYGPKLDFMVRDALGRQWQLGT---IQVDYTL 495

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P   +         +             +   +    F      + + L+    +     
Sbjct: 496 PERFDLTYKGSDNEL------------HRPVMIHRAPFGSMERFIAILLEHTGGNFPLWL 543

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                +I ++          +    +L    IRA +    ++  G +++ A+ +  P  I
Sbjct: 544 MPEQAIIISIS--EKYEKYAEKVLNLLENDEIRA-LADNRNETVGKKIREAEMQKFPFMI 600

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           I G  E     + ++                  +       TI + + V+ VK  + ++
Sbjct: 601 IVGEQEAQDNTITVR------------------QHGGEDLGTITVKDFVNIVKDRINKS 641


>gi|220928797|ref|YP_002505706.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999125|gb|ACL75726.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 635

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + D  R+ ++  G+  I+TP++   +   +     D     ++++
Sbjct: 261 GFPFFMPKGMVLRNLLEDYWRSEHKKAGYQEIKTPVILNKELWLRS-GHWDNYKNNMYTV 319

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q  +++      
Sbjct: 320 AI-DEQDCAIKPMNCPG 335



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 78/258 (30%), Gaps = 13/258 (5%)

Query: 221 DNSGDFTKGANLTSEQ---IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
           D++  F     +T E    I+++  F S+   K        +        G +E+  +S 
Sbjct: 381 DDAHIFMTPEQITDEVTGVINLIDDFYSVFGFK----YNVELSTRPEKSIGSDEMWELST 436

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
              K   +   IK +     G  Y     +   L   +    Q   +   +    R+D  
Sbjct: 437 AGLKKALDEKGIKYTINKGDGAFYGPKIDFH--LEDSIGRTWQCGTIQLDMNLPERFDLS 494

Query: 338 VSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                G+            G     +A+ +   +      + PV +  +           
Sbjct: 495 YIGPDGEKHRPVMVHRVVFGSIERFIAILTEHFAGAFPTWLSPVQVKILPLVDKHYDYAY 554

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              ++L    IR E+    ++  G +++ A     P  ++ G  E    ++ ++    G 
Sbjct: 555 EVKKLLEADDIRVEVD-TRNEKIGYKIREAQMDKTPYMLVIGDKELEGRLVSVRSRKDGD 613

Query: 455 ELSREIKNNESWREARVA 472
             +   +         + 
Sbjct: 614 LGTITPEQFAEKISNEIK 631


>gi|307262323|ref|ZP_07543971.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306867986|gb|EFM99814.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 571

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +    D   +   L     ++   L R    ++  +       +  
Sbjct: 84  GRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTK 138



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L+  G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G ++ K+   G++         ++ +  V 
Sbjct: 539 ANGEIEYKNRRTGEKQMIAKDQLLAFLKENVK 570


>gi|213969174|ref|ZP_03397313.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384830|ref|ZP_07233248.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302064183|ref|ZP_07255724.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302130620|ref|ZP_07256610.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213926172|gb|EEB59728.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 571

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMNAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|330964813|gb|EGH65073.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 571

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMNAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|75812508|ref|YP_320127.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Anabaena
           variabilis ATCC 29413]
 gi|75705264|gb|ABA24938.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Anabaena
           variabilis ATCC 29413]
          Length = 614

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    +     Q+    L+ AGIR E    S +  G Q++ A+    P+  
Sbjct: 512 WLAPVQLRLLPVSDEVREYAQLVVISLKKAGIRVETD-SSGERLGKQIRTAELEKIPVVA 570

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E     L ++    G      +       +  +   ++
Sbjct: 571 VVGKKEVENQNLSVRTRQSGDLGVLNMDEILHRLQDAINSKSV 613



 Score = 46.8 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I D  R  +   G+  + TP +   D L K     D   + +F  
Sbjct: 237 GLVFWHPKGAIIRYIIEDYWRKSHLESGYQLLYTPHIANLD-LWKTSGHFDFYQENMFDS 295

Query: 74  QDDDGQWISLRYDLTA 89
            D + Q   ++     
Sbjct: 296 MDVENQAYQIKPMNCP 311


>gi|297156817|gb|ADI06529.1| prolyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 566

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
           + D L    K   V    + IG+SR + AL      ES     +E+ P  +  +      
Sbjct: 427 QLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTHDESGLCWPREVAPADVHIVAAGKAL 486

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++        L TAG+R  +   +  + G +   A+    P  ++ G      G++++K
Sbjct: 487 QTELALELADKLGTAGVRVMVDDRAGVSPGVKFTDAELIGVPTILVVG-RGAKDGVVELK 545

Query: 449 DLAKGKELSREIKN 462
           D   G+     +  
Sbjct: 546 DRRTGEREELPVDE 559



 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++   +   +R   +  G   +  P L   +         +     +F ++D  
Sbjct: 46  WLPIGKKVLENVARIVREEMDAIGAQEVLLPALLPREPYEAS-GRWEEYGDLLFRIKDRK 104

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 105 GADYLLGP 112


>gi|225619668|ref|YP_002720925.1| threonyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225214487|gb|ACN83221.1| threonyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 643

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 78/259 (30%), Gaps = 8/259 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     L  E I+ +  +LS+  +         V    A   G +E+  ++    
Sbjct: 379 DDAHIFCTEEQLGDEIINTIEYYLSVYKDFGFENFEIFVSTRPAKSIGSDEIWELATKSL 438

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV-----FGSVGGGGRYD 335
            +  +  +I        G  Y     +          +     V               D
Sbjct: 439 INALDKLKISYKINEGDGAFYGPKIDFNIKDVLDRNWQCGTLQVDFSLPMRFEISYEGKD 498

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G        +    G       + + ++              V +  + ++   + +   
Sbjct: 499 GKKHTPVMLHRAILGSM--ERFIGILVEHYNGKFPLWLSPLQVAVVNVLNEKPQIDRTNE 556

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             + L+ AG R E+   S+ N G ++K    +  P  +I G  E S G L I+  +  + 
Sbjct: 557 VAKALKDAGFRVEVD-ESNDNLGTKIKKYRLQRTPYTVIIGAEEVSSGKLSIRTRSSQEI 615

Query: 456 LSREIKNNESWREARVAQI 474
              ++       +    + 
Sbjct: 616 KDMDLNEFIEKLKKESKER 634



 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     + + I   +   IRN  +  G+  I+TP +   +   +     D   + ++  
Sbjct: 259 GFPFWHPRGMIIYKAVESYIRNENDKRGYVEIKTPAILNEELWHRS-GHWDNYKENMY-F 316

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 317 TEIDETKYAVKPMNCPG 333


>gi|229817631|ref|ZP_04447913.1| hypothetical protein BIFANG_02901 [Bifidobacterium angulatum DSM
           20098]
 gi|229785420|gb|EEP21534.1| hypothetical protein BIFANG_02901 [Bifidobacterium angulatum DSM
           20098]
          Length = 677

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/404 (11%), Positives = 103/404 (25%), Gaps = 48/404 (11%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +        +    +             L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDSMYPPMRLDEEKDENGNVTKQGFDYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T   G   K   L    +++        +                 +  
Sbjct: 417 EQMKDELKNLLTFVLG-LLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEVAKDS 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +            
Sbjct: 476 GLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAADGTHQRP 534

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 535 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 576

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +     Q +   L    +R E+ L   + FG +++ A +   P  +I G  + +   +  
Sbjct: 577 EFAPHLQKFIASLEEETVRCEIDLSDDR-FGKKIRNASKSKAPFILIVGEEDMNNNAVSF 635

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +    G +L+                  +P+ E  + + K++++
Sbjct: 636 R-FRDGSQLNG-----------------VPVDEAKANIMKVIKK 661


>gi|146295981|ref|YP_001179752.1| threonyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409557|gb|ABP66561.1| Ser-tRNA(Thr) hydrolase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 639

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 76/262 (29%), Gaps = 6/262 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
             T +        +   ++I  ++  +         + +  +        G +E   ++E
Sbjct: 380 CFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFGFKYHVELSTRPENSMGTDEQWNMAE 439

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
              K       I        G  Y     +          +     +        R+D  
Sbjct: 440 TALKEALEEVGINYKINEGDGAFYGPKIDFHLEDSLKRTWQ--CATIQLDFQMPERFDLY 497

Query: 338 VSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                G             G     +A+ +   +      + P+ I  +    +      
Sbjct: 498 YIGEDGAKHRPVMLHRVVFGSIERFIAILTEHFAGAFPVWLAPIQIRVIPVSDNFNDYAA 557

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             +Q L+  G R E     S+  G +++ A  +  P  +I G  ER    + ++D  KG 
Sbjct: 558 KISQTLKENGFRVEEDF-RSETVGYKIRDAQLQKIPYMVIVGEKERRENTIAVRDRKKGD 616

Query: 455 ELSREIKNNESWREARVAQITI 476
             S  I    S  + +V +  I
Sbjct: 617 LGSFTIDKFVSMVKEKVEKKVI 638



 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  ++  G+  I+TP++   D   +     D   + ++  
Sbjct: 264 GFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLTKDLWVQS-GHWDHYKENMY-F 321

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q  +++      
Sbjct: 322 TKIDDQEFAIKPMNCPG 338


>gi|322372498|ref|ZP_08047034.1| threonine--tRNA ligase [Streptococcus sp. C150]
 gi|321277540|gb|EFX54609.1| threonine--tRNA ligase [Streptococcus sp. C150]
          Length = 648

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L                +      +   +  
Sbjct: 502 HYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RAE+     +N   Q K  A + +  P  +I G  E   G + ++  
Sbjct: 562 AWKVAKKLRDRGVRAEVD---ERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVAQITIPISE 480
            + +  +  +        A +A+ + P +E
Sbjct: 619 GQKQTHTETVSEFVENILADIARKSRPDAE 648



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 64/259 (24%), Gaps = 10/259 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR             + +       +YR  P+   E     R+ +     
Sbjct: 321 MDMGDGEEFVLRPMNCP-------HHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                    + +     +  + +E    K     I +     L     ++        ++
Sbjct: 374 -GLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDFNLTDYRFRLSYRDPADKHK 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   +   +     V  +  E           G  L  +    +    ++   +  
Sbjct: 433 YFDNDEMWENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLD 492

Query: 253 HELYELVKGTIAGEKGFNE 271
             L E       G  G   
Sbjct: 493 FLLPERFDLHYIGADGEEH 511


>gi|260424668|ref|ZP_05732876.2| threonine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402758|gb|EEW96305.1| threonine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 647

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 2/90 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN ++   R ++  +G++ I TP++  S  L       D   + ++  
Sbjct: 273 GFPFFHPKGMVIRNELIAYERELFREFGYEEIMTPII-LSKKLWLQSGHWDHYKENMY-F 330

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIV 103
              D +  +++         Y   N  +  
Sbjct: 331 TQIDEEDYAVKPMNCPGGILYYKTNQHSYR 360



 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 78/271 (28%), Gaps = 21/271 (7%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E I  M  +  +     +    E +        G  EL  IS    
Sbjct: 393 DDAHIFMTQDQMKDEVIKTMEMYRKLYSVFGLEYHVE-LSTRPENSMGSEELWEISTNAL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ---KPVVFGSVGGGGRYDGL 337
           +    +  +        G  Y     +          +       +              
Sbjct: 452 RDAVEAAGVPYVINEGDGAFYGPKLDFHIKDCLGRTWQCGTIQMDMQLPERFDVNYVGED 511

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +   G+      + + ++    +  +   + PV +  +      ++  +   
Sbjct: 512 GEKHRAVMLHRAGYGSLERFIGILIEHFAGAFPSW--IAPVQVKVVPVTEKHMNYARSVA 569

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L  + +R E+  G+    G +++ A     P  ++ G  E +   + ++    G E S
Sbjct: 570 DALSASNVRVEIEEGND-TLGYKIRKAQMEKVPYTLVVGDKEMNGHTVSVRSRKNGDEGS 628

Query: 458 REIKNNESWREARVAQITIPISELVSTVKKI 488
             +               + +S L+  ++  
Sbjct: 629 LPVA--------------VFVSNLIREIRDR 645


>gi|154150426|ref|YP_001404044.1| threonyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166223354|sp|A7I6P0|SYT_METB6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|153998978|gb|ABS55401.1| threonyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 614

 Score = 61.0 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 83/290 (28%), Gaps = 4/290 (1%)

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
            +++    +       G+   +      K    + +        +   +G  + L   R 
Sbjct: 276 FKSNNRDMMLRFAACFGMFSIMRDMHISKNTLPMKMYELSTYSFRHEQKGEVIGLKRLRC 335

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
               D         E +      L+I  +       +LV      +K ++E     + + 
Sbjct: 336 FTMPDMHSLCTDMPEAMKCFEEQLAIGWQTGRDFETKLVAAFRCTKKFYDENEAWVKKIV 395

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK-QKPVVFGSVGGGGRYDGLVS 339
           K       I+I S  V   E             P+ N   Q  V   +      +    +
Sbjct: 396 KESDCPMLIEILSERVHYWEAKIDLAAIDGQNRPIENPTVQIDVESSTRFNIKYFKDDGT 455

Query: 340 RFKGQNVPATGFSIGISRLIVALKSL--ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
                 +  +        +   L+++  +        + PV    +       +  Q   
Sbjct: 456 PVYPPILHCSPTGSVERVICAILENISTQKVPALPTWLSPVQARVVPVAERHTAYAQEIC 515

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
             L   GIR ++     ++ G +++ A     P  I+ G  E +   L +
Sbjct: 516 DALNAQGIRCDLD-ERDESVGKKVREAGMDWVPYVIVIGDEEMASKKLTV 564



 Score = 41.4 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 57/211 (27%), Gaps = 26/211 (12%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL-PDEDRPNKGVFSLQDD 76
              K   IR+ + D +  +   YG  P+ETP++   D   K +    D+  +  +  +  
Sbjct: 222 WMPKGKLIRDLMADYVLALLLPYGATPVETPVM--YDLGDKAIYEHADKFGERQYRFK-S 278

Query: 77  DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
           + + + LR+                            +            +  +    + 
Sbjct: 279 NNRDMMLRF-------------------AACFGMFSIMRDMHISKNTLPMKMYELSTYSF 319

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
               +     +  +   T+  +     D        K  +  L      G D   + +  
Sbjct: 320 RHEQKGEVIGLKRLRCFTMPDMHSLCTD---MPEAMKCFEEQLAIGWQTGRDFETKLVAA 376

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            R   K        VK ++ E       +  
Sbjct: 377 FRCTKKFYDENEAWVKKIVKESDCPMLIEIL 407


>gi|119194837|ref|XP_001248022.1| threonyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
          Length = 757

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/483 (9%), Positives = 110/483 (22%), Gaps = 74/483 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  L +     +     +F 
Sbjct: 341 GCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNM--YDVGLWRTSGHWNHYKDDMFK 398

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L  +  +  +L+                              +R        F    + +
Sbjct: 399 LAVEK-REWALKPMNCPG-------------HCIMFNHRERSYRELPLRMADFGVLHRNE 444

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I +    +    R I         L    +  +
Sbjct: 445 ASGALHGLTRVRKFQQDDTHIFCTEDQITQEIEGLFDFLRAIYGLFGFSFKLKLSTRPEK 504

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L  L   D  +    +    L     +D   D   GA    +    +   L  + + + 
Sbjct: 505 YLGKLETWDFAEAQLKE---ALTRFKGSDWEIDEGDGAFYGPKIDITIQDALKREFQCAT 561

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L   +      E   NE+                                        
Sbjct: 562 IQLDYQLPQNFKLEYMTNEIAKPKA----------------------------------P 587

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL--ESSTN 370
            P   E        S                  +          R    L          
Sbjct: 588 EPKKEESGPREGGDSKAADSDDGVPGPGRARPVMIHRAIIGSFERFFGILIEHFGGKWPF 647

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
            +     +++  M    D + + Q     LR   +  ++ +  +     +++        
Sbjct: 648 WLSPRQILIVPVMPAVYDYVEELQGI---LRGDKLNVDIDVSGN-TLQKKIRNGQLAQYN 703

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
              + G  E+    + I++                   ++     +P++E    ++ + +
Sbjct: 704 FIFVVGAQEKETRTVNIRNRDD--------------PSSQAKGSLVPLNEAREKLRALRK 749

Query: 491 ENK 493
           E +
Sbjct: 750 ERR 752


>gi|146276453|ref|YP_001166612.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166980148|sp|A4WPJ3|SYP_RHOS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145554694|gb|ABP69307.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 445

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 45/458 (9%), Positives = 116/458 (25%), Gaps = 63/458 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         +   R+   +       G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQQAAGIYSWLPLGFKALKRVEQIVHEEQIRAGHIPLLMPTLQPAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  + D   + +       ++   + R    ++  +      Y +   FR+E     
Sbjct: 90  GEEMLRITDRHKRDMLYGPTNEEMITDIFRSHVNSYKDLP--LTLYHVQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  +     D+ +       +  +             R  L  I     
Sbjct: 148 GVMRGREFLMKDGYNFDLDFDSAIHAYNRHMVSYL---------RTYERMGLQAI----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      ++   G    DN+ +F   A+    +       
Sbjct: 194 --------------------------PMRAASGPIGGDNTHEFLVLASTGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D   +  +  + V    + E+    +   +    ++    +    ++          
Sbjct: 221 VFYDAAITDLKFGDRVVDYDSREECEAIVKEWTTPYARTDETHDEAIFNAIPEERRRTSR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F     +       +       DG        +       +  + +  +  
Sbjct: 281 GIEVGQIFYFGTKYSEPMGATVVTA------DGARVPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAE-MFLGSSKNFGNQL 421
                         V I  +     S     +   + L   G+  E ++    +  G + 
Sbjct: 335 DKGIIWPEGVTPFHVGIVNLKQGDSSTDLACEALYRDLSAKGL--EPLYDDRDERAGAKF 392

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
              D    P  I  G    + G +++ +   G+     
Sbjct: 393 ATMDLIGLPWRITVGPRGIAAGKVELTNRRTGESEEMS 430


>gi|315225228|ref|ZP_07867045.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314944911|gb|EFS96943.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 646

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 36/111 (32%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +              +       +  Q   
Sbjct: 508 NEMHRPVMIHRAPFGSMERFVAILLEHTAGNFPLWLNPSQA--IVLSLSEKYENYAQKVL 565

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           ++L  + IR  +    ++  G +++ A+ +  P  +I G  E   G + ++
Sbjct: 566 RLLENSDIRTLID-NRAETMGKKIREAETKKIPYMLIVGENEEKEGTVSVR 615



 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   +R R+   +R   +  G++ + TP + + +         D+  K  F
Sbjct: 261 GLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIGHKNLYVTS-GHWDKYGKDSF 317


>gi|294782476|ref|ZP_06747802.1| threonine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481117|gb|EFG28892.1| threonine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 637

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 41/102 (40%), Gaps = 2/102 (1%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  +  + + +   +     L+  GIRAE+    ++  G +++ A+ R   P
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMAKLQELGIRAELD-DRNETIGYKIREANGRYKIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + +I G  E     + I+      +  + + +   +     A
Sbjct: 591 MQLIIGKNEVENKEVNIRRFGSKDQFPKSLDDFYEYVVDEAA 632



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K +  RN ++D  R  +E  G+  +ETP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPIMLNKE-LWEISGHWFNYRENMYT 317


>gi|169828188|ref|YP_001698346.1| threonyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168992676|gb|ACA40216.1| Threonyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
          Length = 637

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/368 (9%), Positives = 92/368 (25%), Gaps = 17/368 (4%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           +   N   +     +Y      + +           Q   +  G      D      + +
Sbjct: 266 FYLANGQILRNELESYLRNLQAKYDYQEVRTPLMMNQRLWEQSGHWDHYKDNMYFTQVDN 325

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
              A+       H+ I    +       I +    +++           L          
Sbjct: 326 QSFALKPMNCPGHMLIFKNNLHSYRDLPIRMAEFGQVHRHEFSGALNGLLRVRSFCQDDA 385

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE-- 271
            +         +     N+  E  D+     +++L     +    +      E+      
Sbjct: 386 HIFATPQQIEDEIALALNIIDEVYDVFGFQYTVELSTRPDDYMGELALWDQAEEALENVL 445

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L +  +     G  +         ++     +       L F +  +             
Sbjct: 446 LNLGIDYTINEGDGAFYGPKIDIHIKDAIQRSHQCATVQLDFQLPEKFDLTY-------- 497

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
              +    + +   +    F      L + ++    +         V +  +        
Sbjct: 498 --INEHNEKVRPIVIHRAVFGSIDRFLGILIEHFGGAFPIWLAPQQVQVIAVA--DAHQD 553

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 + L+   IR ++     +  G +++ A     P  I+ G  E +   + ++   
Sbjct: 554 YAIQVVKALQHEQIRVQID-DRQEKLGKKIREAQLHKIPYIIVIGDRETANQNVSVR--R 610

Query: 452 KGKELSRE 459
            G++ S E
Sbjct: 611 HGQQASVE 618


>gi|256810410|ref|YP_003127779.1| glycyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793610|gb|ACV24279.1| glycyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 577

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 20/113 (17%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  + +  D     +   QMLR + I AE     S   G +   AD    P  I     
Sbjct: 485 YVLPLVNKDDMPKIAKEINQMLRESSIIAE--YDDSGAIGRRYMRADEIGVPFCITVDGQ 542

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                 + +++    +++                   + I ELV  +K+ L+E
Sbjct: 543 TLKDKTVTVRERNTREQI------------------RVKIDELVDYLKEKLKE 577



 Score = 41.0 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++N I+   R  Y    GF  IE+P +   + L    
Sbjct: 31 GFVDYGPLGCLLKNNIISKFREQYIVKEGFYEIESPTVTPYEVLKASG 78


>gi|270264794|ref|ZP_06193058.1| prolyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270041092|gb|EFA14192.1| prolyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 572

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N     +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNANAIEVCMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFVDRGERPFVLGP 108



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ--MYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       +         LR+ GI   +     +  G  
Sbjct: 461 DDRGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYNTLRSHGIDVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P +I+ G        ++ K+   G++   +      +   ++ 
Sbjct: 520 FADMELIGVPHSIVIGDRNLDSEEIEYKNRRVGEKQMIKTGEIVDFLLGQIK 571


>gi|188586439|ref|YP_001917984.1| Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|229558041|sp|B2A5P2|SYT_NATTJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|179351126|gb|ACB85396.1| Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 636

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 45/134 (33%), Gaps = 3/134 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +    +        + ++  E            +I  +      +   +  T+
Sbjct: 503 QKHRPVMIHRVIYGAIERFFALLIEHYEGKFPLWLAPRQAVIIPIA--DRHMEYGKDITK 560

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L + GIRA++    ++  G +++ A  +  P  +I G  E     + ++    G   S+
Sbjct: 561 QLESEGIRADLD-QRNEKIGYKIRDAQLKKVPYMLIVGDDEVENKTVSVRTREDGDIGSK 619

Query: 459 EIKNNESWREARVA 472
            +       +  + 
Sbjct: 620 SVAELVDEIKVEID 633



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 29/92 (31%), Gaps = 2/92 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + + N ++D  R  +   G+  I TP++       +     D   + ++  
Sbjct: 263 GSPFFHNNGMIVINELIDFWRREHRKAGYQEISTPIILNRGLWERS-GHWDHFQENMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFP 105
            + D +  +++             N  +    
Sbjct: 321 TEIDDEDFAVKPMNCPGAMLVYNNNMYSYRDF 352


>gi|330872665|gb|EGH06814.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 571

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMNAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|303251144|ref|ZP_07337328.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307253514|ref|ZP_07535384.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302649995|gb|EFL80167.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306859015|gb|EFM91058.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 571

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +    D   +   L     ++   L R    ++  +       +  
Sbjct: 84  GRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTK 138



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/89 (10%), Positives = 26/89 (29%), Gaps = 1/89 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L+  G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREA 469
           + G ++ K+   G++         ++ + 
Sbjct: 539 ANGEIEYKNRRTGEKQMIAKDQLLAFLKE 567


>gi|297835784|ref|XP_002885774.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331614|gb|EFH62033.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 650

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 2/102 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +    + L   +  ++ LR  G+RAE+  G        ++ A+ +  PL  
Sbjct: 549 WLSPIQVRVLPVTDNQLEFCKEVSKKLRACGVRAELCHGER--LPKLIRNAETQKIPLMA 606

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E   G + ++    G+  +  + +  +     V   T
Sbjct: 607 VVGPKEVETGTVTVRSRFGGELGTIPVDDFINKINIAVETRT 648



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN I +S + ++  +G+D I TP +  +D L K     D   + ++  
Sbjct: 274 GLVFWHPKGAIVRNIIEESWKKMHVEHGYDLIYTPHVAKAD-LWKISGHLDFYRENMYDQ 332

Query: 74  QDDDGQWISLRYDLTA 89
            + + +   LR     
Sbjct: 333 MEIEDELYQLRPMNCP 348


>gi|311742315|ref|ZP_07716124.1| threonine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313943|gb|EFQ83851.1| threonine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 661

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 55/443 (12%), Positives = 110/443 (24%), Gaps = 82/443 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      +   I+  + D +R  +   GF+ + TP +                 +G+F 
Sbjct: 278 SGLPVFHPRGGVIKREMEDYVRRRHIEEGFEYVGTPHIAKEGLFHTS-GHLPYYGEGMFP 336

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             D DG              R  A N              P+        GR  + +   
Sbjct: 337 ALDVDGSDY-----------RLKAMN-------------CPMHNLIFRSRGRSYRELPLR 372

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
               G       + +   +           + Y         +  +L+ +     D   +
Sbjct: 373 FFEFGHVYRNEKSGVIHGLTRVRGFAQDDSHSYVTPEQAPGEIRHLLQFVLSLLRDFGLD 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                                 L     D S D   G++        ++  + ++     
Sbjct: 433 DFY-------------------LELSTRDASKDKFIGSDEDWATATKVLEDVCLESG--- 470

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               ELV                             ++    I R  +  T       + 
Sbjct: 471 ---LELVPDPGGA---------------AYYGPKVSVQARDAIGRSWQMST-------IQ 505

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           +       +      V   G     V     +      F   +           +    +
Sbjct: 506 YDFNQPSPERFNLEYVAADGSRRQPVMIHSAKFGSIERFMGVLVEHYA-----GAFPPWL 560

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             +  V I   +  +D L      T  LR  GIRAE+     +    +++ A  +  P  
Sbjct: 561 APVQVVGIPVAERHADYL---VNLTARLRALGIRAEVDHSDER-MQKKIRNAQTQKVPFM 616

Query: 433 IIQGTGERSRGMLQIKDLAKGKE 455
           ++ G  +   G +  +    G++
Sbjct: 617 LLAGDNDIDGGAVSFRY-RNGEQ 638


>gi|160943529|ref|ZP_02090762.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445208|gb|EDP22211.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103777|emb|CBL01321.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium
           prausnitzii SL3/3]
          Length = 594

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/333 (11%), Positives = 87/333 (26%), Gaps = 10/333 (3%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M     +       +   I  N       +  +IG    D   
Sbjct: 258 TSGHWDHYRENMFPAMEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIAHDFRY 317

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L+ I++   F      L     +  +             +   +  +  +   + 
Sbjct: 318 ESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVANVCDLIFEVYKDFNITDYRCVLSLRD 377

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +  +              L  +   +    + +  I  ++     L+        A  
Sbjct: 378 PADKKKYHDDDAMWNHAEQALREVLTEL--GIHFTEEIGEAAFYGPKLDVNVKPAVGAEY 435

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                                  D   S      +           +   ++  +     
Sbjct: 436 TLSTCQLDFCLPA---KFHLTYVDKDGSEKTPVVLHRAILGSLDRFMAYLIEETKGKFPT 492

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN-CP 430
                 V +  +     +L   Q  T+ L  AGIR  +    ++  G +++ A + +  P
Sbjct: 493 WLAPTQVKVLPVS--EKTLEYAQDVTEKLSDAGIRVVLD-DDNQKIGYKIRAAQQVDRVP 549

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             ++ G  E   G + ++D  KG+     +++ 
Sbjct: 550 YMLVLGAKEAEAGNISVRD-RKGETAEMSLEDF 581



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/230 (9%), Positives = 56/230 (24%), Gaps = 9/230 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG          +   + + I+      G+  + TP +   +   K     D   + +F 
Sbjct: 213 RGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLY-KTSGHWDHYRENMFP 271

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR             +         +YR  P+   E     R+       
Sbjct: 272 AMEMEGESYVLRPMNCP-------HHMMIYANRPHSYRDLPMRIGEIAHDFRYESSGTL- 323

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                      +        + +++      D    +     +      + L       +
Sbjct: 324 KGIERGRHFCQNDAHLFCTPEQIKSEVANVCDLIFEVYKDFNITDYRCVLSLRDPADKKK 383

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                   +  ++   + +  L      +       G  L       + +
Sbjct: 384 YHDDDAMWNHAEQALREVLTELGIHFTEEIGEAAFYGPKLDVNVKPAVGA 433


>gi|307251435|ref|ZP_07533349.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306856519|gb|EFM88661.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 571

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +    D   +   L     ++   L R    ++  +       +  
Sbjct: 84  GRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTK 138



 Score = 43.7 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 9/92 (9%), Positives = 26/92 (28%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L+   +         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVQQFSEELYRTLKAQDVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G ++ K+   G++         ++ +  V 
Sbjct: 539 ANGEIEYKNRRTGEKQMIAKDQLLAFLKENVK 570


>gi|307246760|ref|ZP_07528828.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307255744|ref|ZP_07537547.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307260196|ref|ZP_07541905.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306852335|gb|EFM84572.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306861304|gb|EFM93295.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306865741|gb|EFM97620.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 571

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +    D   +   L     ++   L R    ++  +       +  
Sbjct: 84  GRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTK 138



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L+  G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVQQFSEELYRTLKAQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G ++ K+   G++         ++ +  V 
Sbjct: 539 ANGEIEYKNRRTGEKQMIAKDQLLAFLKENVK 570


>gi|167630335|ref|YP_001680834.1| prolyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|226701294|sp|B0THP0|SYP_HELMI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167593075|gb|ABZ84823.1| prolyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 575

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 46/127 (36%), Gaps = 19/127 (14%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I     +++   + D+  +   +   + L   G+   +     +  G + K AD  
Sbjct: 463 WPMAIAPFQVLVVPVSNKDAAQMEAAEAIYKELIAKGVDTLLDDRPERA-GVKFKDADLI 521

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P+ I  G    S G++++K    G++                   T    ++V+ V+ 
Sbjct: 522 GIPVRITVGNKLASDGVVEVKLRRGGEQ------------------FTASREDVVAQVQA 563

Query: 488 ILQENKE 494
           +++E  E
Sbjct: 564 LIREQME 570


>gi|16331761|ref|NP_442489.1| threonyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501062|sp|Q55806|SYT_SYNY3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|1001722|dbj|BAA10559.1| threonyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 603

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 74/257 (28%), Gaps = 15/257 (5%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
            L  E  +      T   +L  +     +SF   + +K +       K   A  +   EL
Sbjct: 354 QLDEEFLSVVDLILTVFKSLQLKNFKARLSFRDPESDKYIGSDEAWEKAQGAIRRAVQEL 413

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         +             +     + E+       + G   
Sbjct: 414 E--MDYFEAPGEAA-FYGPKLDFIFQDALEREWQLGTVQVDYNLPERFDLEYIAADGSRQ 470

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           R            +    F      + + ++              V +  +    + L  
Sbjct: 471 R---------PVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPIQVRLLAVS--DEFLPF 519

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q +++ G+RAE+     +  G  ++ A+++  P+  + G  E     L I+  A 
Sbjct: 520 AQSIVQQMQSLGLRAEVDTSGDR-LGKMIRNAEKQKIPVMAVIGAKEVEANALNIRTRAS 578

Query: 453 GKELSREIKNNESWREA 469
           G+     +       +A
Sbjct: 579 GELGEIPVTEVLEKLQA 595



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  + D ++      G+ P+ TP +   D   K      +  + +F
Sbjct: 217 GLPLWTPKGTIIRTILEDFLKQEQIKRGYLPVVTPHIARVDLF-KQSGHWQKYQEDMF 273


>gi|331016426|gb|EGH96482.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 544

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMNAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|322819645|gb|EFZ26679.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 816

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/489 (9%), Positives = 126/489 (25%), Gaps = 36/489 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N +++  R  Y   GF+ + +P + +S  L       D+    +F +
Sbjct: 322 GSAFWLPHGARIYNALVEFQRKQYRRRGFEEVVSPNM-FSSKLWMVSGHWDKYADNMFRI 380

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHG------PGRFR 126
             +      ++           A    +    P R    G + RNE  G        R  
Sbjct: 381 VVEKEDH-GMKPMNCPGHCIMYAMQQHSYKELPIRYADFGVLHRNELSGALTGLTRVRRF 439

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR------------NDYHIGINNRKI 174
           Q     +       +       + + D    +G K                 +       
Sbjct: 440 QQDDAHIFCRMDQVQEEIRGALVFLDDVYRTLGFKFFLKHATRPENKLGTEEMWDQAEAY 499

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   L       +   +             +  ++ ++ LL +   +     T       
Sbjct: 500 LRAALNSFCGIPEHLPDPFKEGTTFTFDGRRDSVKKLRALLKKQAANRENKDTDKKEEKD 559

Query: 235 E--QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
           +  +          +         ++        +  ++   +            +  + 
Sbjct: 560 DEWKGPTHAEAWEENTGDGAFYGPKIDIVVEDALRRRHQCATVQLDFNLPQRFGLKYTLP 619

Query: 293 STIVRGLEYYTGCVYEAILGFPVMN------------EKQKPVVFGSVGGGGRYDGLVSR 340
           ++ V G        +      P +             E +    +         D  +  
Sbjct: 620 TSTVEGGAGAEAREHHTDPNAPNVGTDATTTEGKPEAEDECLSSYEKAARELCIDRRLDA 679

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            + + V       G     +A+            + P  +  +   +++ +         
Sbjct: 680 NQARPVMIHRAIFGSLERCIAILCEHYGGEWPLWLSPRQVIVIPVSAENTTYATKVRDAF 739

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
              G  A++  G++     +++ A+        + G  E     + ++     +  ++ +
Sbjct: 740 YADGFHADVDSGNA-TLDKKIRNAEVARYNFIFVVGQVEEETQTVNVRTRDNRRHGTKSL 798

Query: 461 KNNESWREA 469
            + + W   
Sbjct: 799 ADVQRWLRE 807


>gi|303252707|ref|ZP_07338869.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307248901|ref|ZP_07530912.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302648446|gb|EFL78640.1| prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306854596|gb|EFM86788.1| Prolyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 571

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     I++  ++ + IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +    D   +   L     ++   L R    ++  +       +  
Sbjct: 84  GRWNDYGAELLRFVDRGSRDFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTK 138



 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 9/92 (9%), Positives = 26/92 (28%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L+   +         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVQQFSEELYRTLKAQDVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G ++ K+   G++         ++ +  V 
Sbjct: 539 ANGEIEYKNRRTGEKQMIAKDQLLAFLKENVK 570


>gi|169831543|ref|YP_001717525.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638387|gb|ACA59893.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 635

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     + + +RN +    R  +   G+  I TP++   +   +     D   + ++  
Sbjct: 260 GFPFFHPRGMVLRNELERFWREEHTKNGYLEIRTPIILRQELWERS-GHWDHYRENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 318 TTIDDEKYAVKPMNCPG 334



 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 1/114 (0%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     +A+ +   +      + PV +  +       +  Q  T+ L  AG+RAE 
Sbjct: 510 RVIYGSMERFIAILTEHFAGAFPVWLAPVQVRILPITDRHAAYAQEVTEALLRAGVRAEF 569

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             G ++  G +++ A     P  ++ G  E     + ++    G   S E+ + 
Sbjct: 570 D-GRNEKVGYKIREAQVLKVPYMLVIGDREAESRTVAVRHRTAGDLGSMELNDF 622


>gi|66044647|ref|YP_234488.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|81308436|sp|Q4ZWM2|SYP_PSEU2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|63255354|gb|AAY36450.1| Prolyl-tRNA synthetase, bacterial [Pseudomonas syringae pv.
           syringae B728a]
          Length = 571

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|289628621|ref|ZP_06461575.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651507|ref|ZP_06482850.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330868600|gb|EGH03309.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 571

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|224476774|ref|YP_002634380.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254783537|sp|B9DNC9|SYT_STACT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222421381|emb|CAL28195.1| threonyl-tRNA synthetase 1 [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 647

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 47/132 (35%), Gaps = 18/132 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R E+    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVEIIPVNVD-LHYDYARQIQDELKSQGVRVEID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A     P  ++ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMHKIPYQLVIGDKEIENNEVNVRKYGSKDQETVE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENKE 494
             ++  L++ ++
Sbjct: 637 DEIR--LKKQRQ 646



 Score = 43.7 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 102/384 (26%), Gaps = 31/384 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G+D + TP++   +   K     D     +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVALGYDHVYTPVMANVELY-KTSGHWDHYQDDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
              D  + + LR                        Y+  P    E          I   
Sbjct: 321 MKLDETEEMVLRP--------------MNCPHHMMIYKNKPHSYRELP------IRIAEL 360

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                  A  A + +  +   TL    I      I    +++++ IL+     G +  + 
Sbjct: 361 GTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVELILDVYEDFGFENYSF 420

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--- 249
           RL      DK   F    +     E       +      L  E+     +F    L+   
Sbjct: 421 RLSYRDPEDKEKYFDDDEM----WERAESMLKEAVDEMGLPYEEAIGEAAFYGPKLDVQV 476

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K+     E +                   + K G     + I   +V  +E +   + E 
Sbjct: 477 KTAMGKEETLSTAQLDFLLPERFD--LAYIGKDGEEHRPVVIHRGVVSTMERFVAFLTEE 534

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
             G        K V    V     YD                 I      +  K  E+  
Sbjct: 535 TKGAFPTWLAPKQVEIIPVNVDLHYDYARQIQDELKSQGVRVEIDDRNEKMGYKIREAQM 594

Query: 370 NNIKEMGPVLITTMDHDSDSLSKY 393
           + I     +    ++++  ++ KY
Sbjct: 595 HKIPYQLVIGDKEIENNEVNVRKY 618


>gi|164427281|ref|XP_964988.2| threonyl-tRNA synthetase, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|157071680|gb|EAA35752.2| threonyl-tRNA synthetase, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 498

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/447 (9%), Positives = 113/447 (25%), Gaps = 71/447 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI NR+++ +R  Y +YGF  + TP + Y  +L       +     +F++
Sbjct: 74  GSPIFLPNGARIFNRLVEYLRKQYVHYGFQEVITPTI-YKKALWAKSGHLENYADDMFTV 132

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                                      +         +  + D 
Sbjct: 133 T------------------------------------------STSPSRADVTEAGEADE 150

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  D+     +R  + G L  +        ++ 
Sbjct: 151 YGLKPMNCPGHCLIFAAQKRSYRDLPIRYADFSP--LHRNEISGALSGLTRVRRFHQDDG 208

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            I  R            +   L   R            L              +   S+ 
Sbjct: 209 HIFCR-----PNQIEDEISKTLEFIRRVYKDFRLGSYRLKLSTRPE-------NHIGSLE 256

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILG 312
           +                E   ++E           + +  +  +  +  T    ++    
Sbjct: 257 DWEHAEGSLKRALDNSGEPWTLNEGDGAFYGPKIDVILKDSDGKEHQTATIQLDFQLPKR 316

Query: 313 FPVMNEKQKPV--VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           F +  +   P     G          +    +   +             + ++       
Sbjct: 317 FELEYQAPAPELEAKGETTTDPELLAVSGPVRPVMIHRAVLGSAERMFALLIEHYNGKWP 376

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----------AGIRAEMFLGSSKNFGNQ 420
                   ++ T++     L   +   ++L            +G+  ++   S+++   +
Sbjct: 377 FWLNPRQGIVLTVNDSEPVLQFARNTQKVLLGTDSADVHVSPSGLAVDLD-DSARSLSLK 435

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQI 447
           ++ A  +   + I+ G  + + G + +
Sbjct: 436 IREAKTKGYGMIIVVGPKDIANGTVTV 462


>gi|38567275|emb|CAE76565.1| related to threonine--tRNA ligase [Neurospora crassa]
          Length = 497

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/447 (9%), Positives = 113/447 (25%), Gaps = 71/447 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI NR+++ +R  Y +YGF  + TP + Y  +L       +     +F++
Sbjct: 73  GSPIFLPNGARIFNRLVEYLRKQYVHYGFQEVITPTI-YKKALWAKSGHLENYADDMFTV 131

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                                      +         +  + D 
Sbjct: 132 T------------------------------------------STSPSRADVTEAGEADE 149

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  D+     +R  + G L  +        ++ 
Sbjct: 150 YGLKPMNCPGHCLIFAAQKRSYRDLPIRYADFSP--LHRNEISGALSGLTRVRRFHQDDG 207

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            I  R            +   L   R            L              +   S+ 
Sbjct: 208 HIFCR-----PNQIEDEISKTLEFIRRVYKDFRLGSYRLKLSTRPE-------NHIGSLE 255

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILG 312
           +                E   ++E           + +  +  +  +  T    ++    
Sbjct: 256 DWEHAEGSLKRALDNSGEPWTLNEGDGAFYGPKIDVILKDSDGKEHQTATIQLDFQLPKR 315

Query: 313 FPVMNEKQKPV--VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           F +  +   P     G          +    +   +             + ++       
Sbjct: 316 FELEYQAPAPELEAKGETTTDPELLAVSGPVRPVMIHRAVLGSAERMFALLIEHYNGKWP 375

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----------AGIRAEMFLGSSKNFGNQ 420
                   ++ T++     L   +   ++L            +G+  ++   S+++   +
Sbjct: 376 FWLNPRQGIVLTVNDSEPVLQFARNTQKVLLGTDSADVHVSPSGLAVDLD-DSARSLSLK 434

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQI 447
           ++ A  +   + I+ G  + + G + +
Sbjct: 435 IREAKTKGYGMIIVVGPKDIANGTVTV 461


>gi|229030088|ref|ZP_04186151.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228731210|gb|EEL82129.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 236

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 63/211 (29%), Gaps = 7/211 (3%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E    +        G ++L   +E   ++  +S   K       G  Y     +      
Sbjct: 14  EYEVELSTRPEDSMGDDKLWEQAEASLENVLHSLDYKYRLNEGDGAFYGPKIDFHIKDAL 73

Query: 314 PVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              ++                   D    + +   +           L + ++       
Sbjct: 74  NRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRAVLGSLDRFLAILIEHFGGVFP 133

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  V +  +  ++  +   +   + L  AG+R E  +   K  G +++ A  +  P
Sbjct: 134 AWVAPVQVKVIPVS-NAVHVQYAEAVAEKLAQAGVRVERDMREEK-LGYKIREAQMQKVP 191

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             ++ G  E   G + ++    G+E S  ++
Sbjct: 192 YVLVIGDKEMENGAVNVR--KYGEEKSEVVE 220


>gi|71736091|ref|YP_275923.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257487021|ref|ZP_05641062.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|298488219|ref|ZP_07006255.1| Prolyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|114152230|sp|Q48FB4|SYP_PSE14 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71556644|gb|AAZ35855.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|298157277|gb|EFH98361.1| Prolyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320323063|gb|EFW79152.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329665|gb|EFW85654.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330892229|gb|EGH24890.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
 gi|330988958|gb|EGH87061.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009335|gb|EGH89391.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 571

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|270307741|ref|YP_003329799.1| prolyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153633|gb|ACZ61471.1| prolyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 569

 Score = 60.6 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 85/290 (29%), Gaps = 17/290 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           + A+L  G         R   +I + IR      G   +  P+L+  +   +    E   
Sbjct: 31  MIAQLTAGVYSFMPLAWRSIQKIENIIRQEMNKSGCQELAMPVLQPVEIWQQS-GREAPF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEK 119
            + +F L+D   + + L     ++   LA    +++  +       +      P  R   
Sbjct: 90  GQTLFHLKDRKDRNLVLGPTHEEVITDLASRYIQSYRDLPQRLYQIQTKFRDEPRPRGGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN--DYHIGINNRKILDG 177
                F        D      + +   M           G++    D   G    K    
Sbjct: 150 IRVREFIMKDMYSFDASPEGLDESYQTMKQAYESVYRRCGLESMVIDADSGAIGGKASHE 209

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            +       D  +        A  +   F  + +     +       D  + A    + I
Sbjct: 210 FMIVAESGEDSIIYCPKCNYAANAEKAVFKKKTLPKEPLK-------DLEEIATPGQKTI 262

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
             + +FLS+  E ++  ++ +  G         +L +    ++     ++
Sbjct: 263 SEVAAFLSLKPENTLKAVFYMADGKFVMTVIRGDLDINEIKLKNLLKCND 312



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 28/106 (26%), Gaps = 6/106 (5%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLS-KYQMYTQMLRTAGIRAEMFLGSSKNF--GN 419
                          V I  +  D  ++S   +     L   G+         +    G 
Sbjct: 455 DEKGIIWPMPIAPYQVYICGLFLDKPAVSQAAEKMYAELEAQGVEVLFD---DRELTAGV 511

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +   AD    PL +        +G +++K     +     + N   
Sbjct: 512 KFNDADLLGIPLRLTISPRNLDKGGVELKLRRNKEAELVPLDNIVE 557


>gi|327308738|ref|XP_003239060.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459316|gb|EGD84769.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 764

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 50/481 (10%), Positives = 116/481 (24%), Gaps = 67/481 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  + +           +F 
Sbjct: 345 GCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNM--YDVGIWRQSGHWAHYKDDMFK 402

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+                              +R        F    + +
Sbjct: 403 L-DVEKRDWALKPMNCPG-------------HCIMFGHRERSYRELPLRMADFGVLHRNE 448

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I      +    R I         L    +  +
Sbjct: 449 ASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGFSFKLKLSTRPEK 508

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L  L   D  +    + +         D   D   GA    +    +   L  + + + 
Sbjct: 509 YLGKLETWDFAEAQLREALTKF---KGADWEIDEGDGAFYGPKIDITISDALKREHQCAT 565

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L   +      E    E V  S     S   +   +  S   +     +         
Sbjct: 566 IQLDYQLPLNFKLEYMTGETVPKSAAPATSKAEAKPAEGDSNPAQAQPSDSST------- 618

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                 + +PVV      G          +                             +
Sbjct: 619 --PGPGRARPVVIHRAIIGSFERFFGILIEHFG--------------------GKWPFWL 656

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                +++  M   +D + + Q     LR   +  ++ L S      +++          
Sbjct: 657 SPRQILIVPVMASANDYVEELQEI---LRGDKLNVDIDL-SGHTMQKKIRNGQLAQYNFI 712

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            + G  E+    + I++                   ++     +P+ E  + ++ + +E 
Sbjct: 713 FVVGAQEKESRSVNIRNRDD--------------PSSQTKGSLVPLEEARAKLRALRKER 758

Query: 493 K 493
           +
Sbjct: 759 R 759


>gi|296269038|ref|YP_003651670.1| prolyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296091825|gb|ADG87777.1| prolyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 580

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 2/103 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V I       + +       + L + G+R  +      + G + K
Sbjct: 472 DELGLVWPREVAPADVHIVGTGK-ENQIEVAVELAETLESRGLRVLVDDRPGVSPGVKFK 530

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+    P  +I G    + G+L+++D A G      +     
Sbjct: 531 DAELLGMPTIVIVG-RGLANGVLELRDRASGAREEIPLGEAAD 572



 Score = 50.6 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G          +   I   +R   +  G   +  P L   EY ++ G++    D     +
Sbjct: 40  GVYSWLPLGKIVLENIARVVREEMDRMGAQEVLFPALLPREYYEATGRWTEYGDT----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 96  FRLKDRKGADYLLGP 110


>gi|169836558|ref|ZP_02869746.1| prolyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 282

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 50/137 (36%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L RG         ++  +I + +R   +  G   I  P+L+ + SL +        
Sbjct: 31  MIRQLTRGVYSYLPLGYKVLKKIENIVREEMDRAGSQEILMPVLQPA-SLWEESGRWFAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D + +  +L     ++   + R    ++  +      Y+I   FR+E     
Sbjct: 90  GSELMRMKDRNEREFALGPTHEEVVTDIVRNTITSYKELP--FNLYQIQTKFRDEMRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFLMKDAYSFH 164


>gi|168493529|ref|ZP_02717672.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183576436|gb|EDT96964.1| threonyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 647

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/376 (11%), Positives = 93/376 (24%), Gaps = 20/376 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
              +    +     P+   E +         Q D+       +  +  +  M       V
Sbjct: 283 NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQV 342

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                  +  +  R    G++ +    G     +R+  +   D       + ++      
Sbjct: 343 FKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRA 402

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
                 D  +  NLT +    +      D  K                   +E+    + 
Sbjct: 403 LQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM--GVDY 458

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
               G  +         ++        +    L F +                 +Y G  
Sbjct: 459 FEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL-----------KYIGAD 507

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
                  +   G    + R    L                +      +   +       +
Sbjct: 508 GEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAK 567

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++   + +  
Sbjct: 568 KLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQ 624

Query: 457 SREIKNNESWREARVA 472
           +  + N      A +A
Sbjct: 625 TVSVDNFVQAILADIA 640



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELEHYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|149378080|ref|ZP_01895802.1| prolyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357649|gb|EDM46149.1| prolyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 577

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 30/85 (35%), Gaps = 1/85 (1%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  +  +  +L  G        +R+  ++   +R   +  G   +  P ++ ++ L +  
Sbjct: 25  MMLRAGMIRKLASGLYSWLPMGLRVLRKVERIVREEMDKSGAQEVLMPAVQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              ++    +  + D  G+      
Sbjct: 84  GRWEQYGGELLRMNDRHGRDFCFGP 108


>gi|153855829|ref|ZP_01996815.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814]
 gi|149751870|gb|EDM61801.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814]
          Length = 645

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +LD  R +++  G+  + TP++  S  L +     D   + +++ 
Sbjct: 263 GFPFFLPKGMVLKNTLLDYWRELHKKAGYVEVSTPII-LSRHLWETSGHWDHYKENMYTT 321

Query: 74  QDDDGQWISLRYDLTAP 90
           Q  DG+  +++      
Sbjct: 322 QI-DGEDFAIKPMNCPG 337



 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 3/111 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L   Q     L  AGIRAE+    ++  G +++ A  +  P  +
Sbjct: 536 WLAPVQVKVLPISDKHLEYGQKVLDTLNAAGIRAEID-TRAEKIGYKIREAQMQKIPYML 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E    ++ ++    G E  + +    +     +A  T    E+V  
Sbjct: 595 VVGAKEEEENLVSVRSRFAGDEGQKSLDEFVASVTEEIA--TRARREVVKE 643


>gi|297565426|ref|YP_003684398.1| threonyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296849875|gb|ADH62890.1| threonyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 652

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 46/120 (38%), Gaps = 19/120 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+    +      L   +   Q ++ A +R E+     +    +++ A+ +  PL +
Sbjct: 552 WLSPIQAVIVPIADRHLEYARQIAQAMKAAKLRVEVDDRPER-MNAKIRDAELQKIPLIL 610

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E+  G + ++                       AQ T+ + EL+  +++ ++  K
Sbjct: 611 VVGDKEQEEGTINLR------------------ERQAKAQRTLKLEELIGEMQERVRNRK 652



 Score = 40.6 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 1/77 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   IR ++   +    + YG+D + TP +  S                +++
Sbjct: 271 KGLPLWLPKGAFIRKQLEQYMYEKEQEYGYDYVITPHIASSKLYYTS-GHLPYYKDDMYA 329

Query: 73  LQDDDGQWISLRYDLTA 89
             + +G+   L+     
Sbjct: 330 PIEIEGEEYYLKPMNCP 346


>gi|138896280|ref|YP_001126733.1| threonyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134267793|gb|ABO67988.1| Threonyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 649

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 58/465 (12%), Positives = 126/465 (27%), Gaps = 81/465 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+D + TP+L   +   K     D   + +F  
Sbjct: 265 GLPLWLPKGATIRRLIERYIVDKEIALGYDHVYTPVLGSVELY-KTSGHWDHYKENMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEELVLRPMNCP-------HHMMIYKSKLHSYRELPIRIAELGTMHRYEMS----- 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A   +  +   TL    I      I    +++++ ILE     G D+ + R
Sbjct: 372 --------GALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKDFGLDEYSFR 423

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L      DK   +    +     E       +      L   + +   +F    L+    
Sbjct: 424 LSYRDPQDKEKYYDDDEM----WEKAQRMLREAMDELGLDYYEAEGEAAFYGPKLDV--- 476

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           ++   +           + ++  E    +    +       ++      T   + A L  
Sbjct: 477 QVRTALGKDETLSTVQLDFLLP-ERFDLTYIGEDGKPHRPVVIHRGVVSTMERFVAFLIE 535

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                             G +   ++  + + +P +             ++       +K
Sbjct: 536 EYK---------------GAFPTWLAPVQVEVIPVSS------------EAHLDYAYEVK 568

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           +   V    ++ D              R A                Q++       P  +
Sbjct: 569 QALQVNGFRVEVDERDEKIGYKI----REA----------------QMQK-----IPYML 603

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           + G  E +   + ++   + +  +  +    +  E  V Q  +  
Sbjct: 604 VVGDKEAAERAVNVRRYGEKESETVALDKFIAMLEEDVRQKRVKK 648


>gi|251781963|ref|YP_002996265.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390592|dbj|BAH81051.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323126789|gb|ADX24086.1| threonyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 647

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/378 (10%), Positives = 105/378 (27%), Gaps = 16/378 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +      +  Q D+  V    +  +  +  M       V 
Sbjct: 282 KELASGYQHVYTPPLASVELYKTSGHWEHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVY 341

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++    +  
Sbjct: 342 KNHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIRDEF-KRT 400

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                D  +  NLT  +    +S+   +     ++  E+ +   A  KG  +  +  +  
Sbjct: 401 LQLIIDVYEDFNLTDYRF--RLSYRDPEDTHKYYDNDEMWENAQAMLKGAMD-DMGVDYF 457

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 458 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 506

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 507 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKT 566

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+RA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 567 LRDRGVRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTES 625

Query: 460 IKNNESWREARVAQITIP 477
           +++        +A+ + P
Sbjct: 626 VEDFVENILVDIARKSRP 643



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 83/330 (25%), Gaps = 39/330 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     +   + +F +
Sbjct: 260 GLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPV 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N  H        I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVHSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    I      I    ++ L  I   I ++ D  L +
Sbjct: 359 GMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIRDEFKRTLQLI---IDVYEDFNLTD 415

Query: 193 RLIVLRAIDKLDKF-------GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               L   D  D           +  + +L     D   D+ +     +     +   + 
Sbjct: 416 YRFRLSYRDPEDTHKYYDNDEMWENAQAMLKGAMDDMGVDYFEAEGEAAFYGPKLDIQV- 474

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               K+     E +                 + +   G     + I   ++  +E +T  
Sbjct: 475 ----KTALGNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAI 528

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
           + E   G          V    +      D
Sbjct: 529 LIETYKGAFPTWLAPHQVTVIPISNEAHID 558


>gi|74317025|ref|YP_314765.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thiobacillus
           denitrificans ATCC 25259]
 gi|123731846|sp|Q3SK34|SYT_THIDA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|74056520|gb|AAZ96960.1| threonyl-tRNA synthetase, class IIa [Thiobacillus denitrificans
           ATCC 25259]
          Length = 637

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/167 (9%), Positives = 47/167 (28%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  +I   +R  +  YG+  + TP +    S+ +     +  
Sbjct: 257 MQDEAP-GMVFWHPKGWIVWQQIEQYMREKFVEYGYQEVRTPAVMDR-SMWEKSGHWENY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+   ++ +  +++        +       +                 +       
Sbjct: 315 RDNMFTTASEN-RDYAVKPMNCPGHVQIFNSGLHSYRDLPLRLAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +AD +  +     D+       K
Sbjct: 374 IMRVRGFTQDDAHIFCMEEQVEQEVADFIVMLQKVYADFGFNDVLVK 420



 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 46/398 (11%), Positives = 110/398 (27%), Gaps = 30/398 (7%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F          +I    R +    G         +D                M  T    
Sbjct: 266 FWHPKGWIVWQQIEQYMREKFVEYGYQEVRTPAVMDRSMWEKSGHWENYRDNMFTTASEN 325

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + +I +  L         +L E     R        G+  V+      
Sbjct: 326 RDYAVKPMNCPGHVQIFNSGLHSY-RDLPLRLAEFGSCHRNEPSGALHGIMRVRG----F 380

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +V    +  +   +++   +        G +E    +E 
Sbjct: 381 TQDDAHIFCMEEQVEQEVADFIVMLQKVYADFGFNDVLVKLSTRPDKRVGSDESWDKAES 440

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYD 335
              +    N +        G  Y     +        + +              G     
Sbjct: 441 ALAAALEKNGLSFDLQPGEGAFYGPKIEFTLKDTLGRLWQCGTIQLDFNLPVRLGAEFVA 500

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
              +R     +           + + ++    +      + PV +  M+      +  + 
Sbjct: 501 EDNTRKIPVMLHRAILGSMERFIGILIEHHAGNFPLW--LAPVQVMVMNISERQAAYAEA 558

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             + LR AGIRA + L ++K    +++    +  P  ++ G  E    ++ ++  A+G +
Sbjct: 559 VAEALRRAGIRAALDLSNNK-INYKIREHSLQKLPYQLVVGDKEMEARVVAVR--ARGNQ 615

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVK-KILQEN 492
              ++                 + +L++ ++ ++L   
Sbjct: 616 DMGQLG----------------LDDLIARLRAEVLARQ 637


>gi|332974215|gb|EGK11148.1| proline--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 570

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 43/166 (25%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++   +R      G   +  P+++ +D L K  
Sbjct: 26  MLRAGLIKANA-SGLYTWMPMGLRVLRKVEAIVREEMNRAGAIELLMPVVQPAD-LWKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR----TYRIGP 113
              D     +  + D             ++   + R    ++  +          +R   
Sbjct: 84  GRWDFYGDELLRITDRHENPFCFSPTCEEMITDIVRKEVNSYKQLPKNFYHINTKFRDER 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M          +G
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADFDSLKETYQNMYDAYCRVFNRLG 189



 Score = 41.4 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 37/131 (28%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V+I  M+     D  +        L+ AG+   +     +  G  
Sbjct: 459 DERGIIWTDAMSPFTVVIVPMNYKKSDDVKAAADKIYAQLQAAGVDVLLDDRDERA-GVL 517

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           L  ++    P  ++ G      G +                  E  +        I +++
Sbjct: 518 LNDSELLGIPHRVVIGDRALKEGNV------------------EYAQRRDTESQAISVND 559

Query: 481 LVSTVKKILQE 491
           +V+ +   L +
Sbjct: 560 IVAKIVATLTK 570


>gi|309789973|ref|ZP_07684549.1| threonyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308227993|gb|EFO81645.1| threonyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 594

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 49/374 (13%), Positives = 100/374 (26%), Gaps = 29/374 (7%)

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC-DVDNVGSSAE 141
           LRY++     RYV E           Y    V+         + +     +  +      
Sbjct: 226 LRYEM----ERYVRE-------VQTRYGYQHVWTGNVVKEQLYHRSGHYENYRDSMFPPM 274

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
               ++   +        +   +    I+ R +     E   L+            R  D
Sbjct: 275 VESEDLVFRLKPMNCPSHMTLFNQMGVISYRDLPMRFAEFATLY------------RYED 322

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                GL  V+ L  +               +   ++++   LS            L   
Sbjct: 323 SGALNGLTRVRALTQDDCHIFCRPDQIQEEFSL-ALNLIREVLSTYHFTDYKVRLSLRGD 381

Query: 262 TIAGEKGFNELVVISELVRKS-GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
           T        +    +  +R +   N       +            +   +LG        
Sbjct: 382 TGKFVADDEKWEQATSALRAALDANGVEYTEEAGEAAFYGPKADFLARDVLGREWQLSTI 441

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
           +         G  Y G  ++     V     +    R +  L    +    +  + PV  
Sbjct: 442 QVDFIQPSRLGCEYIGEDNQPHTPVVLHRAVTGTTERFLGVLIEHYAGAFPLW-LAPVQA 500

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +      +   Q   Q L   G+R E+     +    +++ A  +  P  +I G  E 
Sbjct: 501 VIIPITDKQMEAAQAVRQRLMAVGMRVEVDSSRDR-MQGKIRRAQLQKIPYMLIIGNKEL 559

Query: 441 SRGMLQIKDLAKGK 454
             G + ++ L  G+
Sbjct: 560 EAGAVAVR-LRSGE 572


>gi|306836356|ref|ZP_07469334.1| proline--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567716|gb|EFM43303.1| proline--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 594

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 59/192 (30%), Gaps = 26/192 (13%)

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
             +  L      E       G          ++     + +P  G        ++A+ + 
Sbjct: 423 DNQGTLALQRGIELGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGIGISRMLAVLAE 482

Query: 366 ESSTNNIKEMG------PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +   +             V +   + D+ ++       + L  AG+          + G 
Sbjct: 483 QRHDDKGLNWPVAVAPYQVHVAVANKDAAAMEAGDKLVEELSQAGLEVLFDDRPKVSPGV 542

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           + K A+    P   I G      G+++++   +G+E                  + +P  
Sbjct: 543 KFKDAELLGMPFVAIVG-RAFKDGIIELR--IRGQET-----------------LEVPAD 582

Query: 480 ELVSTVKKILQE 491
           E+V  + ++++ 
Sbjct: 583 EIVDKLLELVRA 594



 Score = 43.7 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   +I D +R   +  G   +  P L   +   K           +F L
Sbjct: 45  GIYTWLPLGLRTLRKIEDVVRQEMDAIGGQEMLFPALLPREPYEKTN-RWVEYGPNLFRL 103

Query: 74  QDDDGQWISLRY 85
           QD     + L  
Sbjct: 104 QDRKNADLLLGP 115


>gi|302656156|ref|XP_003019834.1| hypothetical protein TRV_06122 [Trichophyton verrucosum HKI 0517]
 gi|291183606|gb|EFE39210.1| hypothetical protein TRV_06122 [Trichophyton verrucosum HKI 0517]
          Length = 764

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 50/481 (10%), Positives = 116/481 (24%), Gaps = 67/481 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  + +           +F 
Sbjct: 345 GCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNM--YDVGIWRQSGHWAHYKDDMFK 402

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+                              +R        F    + +
Sbjct: 403 L-DVEKRDWALKPMNCPG-------------HCIMFGHRERSYRELPLRMADFGVLHRNE 448

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I      +    R I         L    +  +
Sbjct: 449 ASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGFSFKLKLSTRPEK 508

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L  L   D  +    + +         D   D   GA    +    +   L  + + + 
Sbjct: 509 YLGKLETWDFAEAQLREALTKF---KGADWEIDEGDGAFYGPKIDITISDALKREHQCAT 565

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L   +      E    E V  S     S   +   +  S   +     +         
Sbjct: 566 IQLDYQLPLNFKLEYMTGETVPKSAAPATSKAEAKPAEGDSNPAQAQPSDSST------- 618

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                 + +PVV      G          +                             +
Sbjct: 619 --PGPGRARPVVIHRAIIGSFERFFGILIEHFG--------------------GKWPFWL 656

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                +++  M   +D + + Q     LR   +  ++ L S      +++          
Sbjct: 657 SPRQILIVPVMASANDYVEELQEI---LRGDKLNVDIDL-SGHTMQKKIRNGQLAQYNFI 712

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            + G  E+    + I++                   ++     +P+ E  + ++ + +E 
Sbjct: 713 FVVGAQEKESRSVNIRNRDD--------------PSSQTKGSLVPLEEARAKLRALRKER 758

Query: 493 K 493
           +
Sbjct: 759 R 759


>gi|260583173|ref|ZP_05850953.1| prolyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260093791|gb|EEW77699.1| prolyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 572

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              ++    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQVYSNIFNRLG 189



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGIPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRTGEKEMISKDKLLSVLNEK 568


>gi|154344603|ref|XP_001568243.1| threonyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134065580|emb|CAM43350.1| putative threonyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 789

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 57/474 (12%), Positives = 137/474 (28%), Gaps = 24/474 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N +++ +R  Y   GF  + +P + YS  L       ++    +F  
Sbjct: 307 GSAFWLPHGARIYNTLVEFLRKKYRRCGFQEVISPNM-YSSKLWMVSGHWEKYADNMFCT 365

Query: 74  QDDDGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG------PGRFR 126
           +  + +   L+          + ++       P R    G + RNE  G        R  
Sbjct: 366 K-CEKEDFGLKPMNCPGHCIMFASQPHSYRELPIRYADFGVLHRNELSGALTGLTRVRRF 424

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI------------GINNRKI 174
           Q     +                 ++D    +G K   YH                +   
Sbjct: 425 QQDDAHIFCRMDQITDEMEGQMQFLSDVYGVLGFKFYFYHSTRPANKLGSDALWDQSESY 484

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   L +     ++  +      R         ++ +K+L+ +       +  KG     
Sbjct: 485 LRAALNRFCGIPEELPDPLRPDQRFCYDGKPESVKKMKILMKKVEHSEDPNAWKGPTNGG 544

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E         +    K    + + ++          +  + S    K    +   +  + 
Sbjct: 545 EGWIENAGDGAFYGPKIDIVVEDALRRRHQCATIQLDFNLPSRFGLKYTLPAAEKEEVAA 604

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFS 352
                  +T             +++ KP +             +     Q  P       
Sbjct: 605 ASMEKRKHTDPAPTTASPPAAADDESKPKLSTYEAAVRDLGIDLELDANQARPVMIHRAI 664

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
           +G     +A+       +    + P  +  +   + +    Q     +  AG  A++  G
Sbjct: 665 LGSLERSIAILCEHFGGDWPFWLSPRQVMVVPVSASNYGYAQKVRDTMHDAGFYADVDNG 724

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           ++     +++ +++      ++ G  E+    + I+   + +  ++ +     W
Sbjct: 725 AA-TLDKKIRNSEKARYNFILVVGQQEQDATSVNIRARGERRLGNKSLAEVVQW 777


>gi|227503402|ref|ZP_03933451.1| prolyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227075905|gb|EEI13868.1| prolyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 594

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 59/192 (30%), Gaps = 26/192 (13%)

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
             +  L      E       G          ++     + +P  G        ++A+ + 
Sbjct: 423 DNQGTLALQRGIELGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGIGISRMLAVLAE 482

Query: 366 ESSTNNIKEMG------PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +   +             V +   + D+ ++       + L  AG+          + G 
Sbjct: 483 QRHDDKGLNWPVAVAPYQVHVAVANKDAAAMEAGDKLVEELSQAGLEVLFDDRPKVSPGV 542

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           + K A+    P   I G      G+++++   +G+E                  + +P  
Sbjct: 543 KFKDAELLGMPFVAIVG-RAFKDGIIELR--IRGQET-----------------LEVPAD 582

Query: 480 ELVSTVKKILQE 491
           E+V  + ++++ 
Sbjct: 583 EIVDKLLELVRA 594



 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   +I D +R   +  G   +  P L   +   K           +F L
Sbjct: 45  GIYTWLPLGLRALRKIEDVVRQEMDAIGGQEMLFPALLPREPYEKTN-RWVEYGPNLFRL 103

Query: 74  QDDDGQWISLRY 85
           QD     + L  
Sbjct: 104 QDRKNADLLLGP 115


>gi|148826625|ref|YP_001291378.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166980127|sp|A5UDZ4|SYP_HAEIE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148716785|gb|ABQ98995.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 572

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   IR      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKIIREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              ++    +   +D   +   L     ++   L R       +    +      +R   
Sbjct: 84  GRWEQYGPELLRFEDRGNRNFVLGPTHEEVITDLIRREVSSYKQLPLNLYQIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +     M  + ++    +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQVYSNIFNRLG 189



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  ++ G    
Sbjct: 480 MNMHKSESVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 538

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 539 DNGEIEYKNRRSGEKEMISKDKLLSVLNEK 568


>gi|150015022|ref|YP_001307276.1| prolyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|189083493|sp|A6LPP0|SYP_CLOB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149901487|gb|ABR32320.1| prolyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 570

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     +++  ++ D IR      G        +  ++ L +     D  
Sbjct: 31  MIRKMAAGVYNYMPLGLKVLKKVEDIIREEMNAAGAQEFLASAIIPAE-LWQESGRWDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +F L+D   +   L     ++   +AR   +++  +       +  
Sbjct: 90  GAEMFRLKDRGDRDFCLGPTHEEVFTDIARNEIKSYKQLPLNLYQIQTK 138



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 3/111 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              ++      +I     D +         + L +AGI A +   + +  G + K ++  
Sbjct: 462 WPLSVAPYHVSVIPVNVKDEEQARIANEIYEKLTSAGIEALLDDRNERA-GVKFKDSELM 520

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
             P+ I  G    + G ++ K L  G+    +I++  +  +    +  I +
Sbjct: 521 GIPMRITVGKK-INDGEIEFK-LRDGEMEVIKIEDVYNIIKGEFEKNKIKL 569


>gi|163782015|ref|ZP_02177014.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882547|gb|EDP76052.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 641

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/138 (10%), Positives = 39/138 (28%), Gaps = 3/138 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +             + L+                I  +      L   +   
Sbjct: 507 NKKHRPYMIHRAFLGSIERFTGILLEHYAGLLPVWLSPTQARIVPIA--DRHLEYGRKVL 564

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+  G R +M     +    +++ A+    P  ++ G  E   G + ++   +G   S
Sbjct: 565 SRLQEEGFRVDMD-ERDERMNAKIREAELMKIPYVLVVGDREVEAGTVSVRSKKEGNLGS 623

Query: 458 REIKNNESWREARVAQIT 475
             ++        +V +  
Sbjct: 624 MSLEEFIEHLREKVERKE 641


>gi|225352131|ref|ZP_03743154.1| hypothetical protein BIFPSEUDO_03746 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157378|gb|EEG70717.1| hypothetical protein BIFPSEUDO_03746 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 677

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 44/403 (10%), Positives = 105/403 (26%), Gaps = 30/403 (7%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +        +    +     +       L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNVVKQGFDYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T   G   K   L    +++        +                 ++ 
Sbjct: 417 EQMKDELKNLLTFVLG-LLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEVAKES 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
             ELV               ++    I R  +  T  +                      
Sbjct: 476 GLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQL---------------DFNLPER 519

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
            G        +  +   +    F        V L+    +      + PV +  +    +
Sbjct: 520 FGLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVADE 577

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                Q +   L    +R E+ +   + FG +++ A +   P  +I G  + +   +  +
Sbjct: 578 FAPHLQQFIASLEEETVRCEIDMSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSFR 636

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
               G +L+    +    +   V +  + ++  V   K  + +
Sbjct: 637 -FRDGSQLNGVPVDEAKAQIMTVLKKRVQVNN-VDDFKAAIAD 677


>gi|218288925|ref|ZP_03493176.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241014|gb|EED08191.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 648

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G    + R +  L            + P  +       +     +     LR  GIRAE 
Sbjct: 520 GVVGTMERFVAFLIEQYKGAFP-TWLAPTQVVVASVADEFAGYAEEVAAKLRELGIRAEA 578

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +  +K  G +++ A     P  ++ G  ER  G + ++
Sbjct: 579 DVSDNK-IGYKIRQAQTHKIPYTLVVGAREREEGTVSVR 616



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +IR  I   I ++ E+ G+  + TP L   +   K     +     ++  
Sbjct: 264 GLPLWLPNGAKIRRIIERYIVDLEESLGYQHVYTPHLANVELY-KISGHWEHYKDDMYPP 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              D + + LR             +         +YR  P+   E     R+  
Sbjct: 323 MKIDNEELVLRPMNCP-------HHMMVYKHRLHSYRELPIRIAELGTMHRYEM 369


>gi|254304252|ref|ZP_04971610.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324444|gb|EDK89694.1| threonine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 637

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  +  + + +   +     L   GIRAE+    ++  G +++ A+ R   P
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMNKLEELGIRAELD-DRNETIGYKIREANGRYKIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           + +I G  E     + I+      + S+ +    ++    V + TI   
Sbjct: 591 MQLIIGKNEVENKEVNIRRFGSKDQFSKSLDEFYNYV---VDEATIKFD 636



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + IRN ++D  R  +E   +  +ETP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMVIRNVLIDLWRKEHEKAKYLQLETPIMLNKE-LWEVSGHWFNYRENMYT 317


>gi|332289599|ref|YP_004420451.1| prolyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432495|gb|AEC17554.1| prolyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 568

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 46/160 (28%), Gaps = 4/160 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R      G   +  P+++ +D L +     ++ 
Sbjct: 31  MIRKLAAGLYTWLPTGVRVLKKVENIVREEMNKSGAIEVVMPVVQPAD-LWQESQRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   LAR    ++  +       +             
Sbjct: 90  GPELLRFTDRGDRPFVLGPTHEEVITDLARRELSSYKQLPINLYQIQTKFRDEVRPRFGV 149

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
              +             + +  +   +M  T   +  +  
Sbjct: 150 MRSREFIMKDGYSFHLDKESLQQTYDVMHQTYCNIFNRLG 189



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 39/138 (28%), Gaps = 3/138 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS--LSK 392
           DG                +  + +  +        ++      V I  M+    +     
Sbjct: 430 DGKPQTMMMGCYGIGITRVVAAAIEQSHDERGIIWSDALAPFQVAIVPMNMHKSAAVQQY 489

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   Q L   GI   +F    +  G      +    P  II G     +G ++ K    
Sbjct: 490 AEELYQTLLAQGIEV-LFDDRKERPGVMFADMELIGIPHMIIIGEKNLEKGEIEYKSRRS 548

Query: 453 GKELSREIKNNESWREAR 470
           G++   + +    +   +
Sbjct: 549 GEKQMVDKQQLVKFITEK 566


>gi|312623109|ref|YP_004024722.1| prolyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203576|gb|ADQ46903.1| prolyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 572

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G         R+  +I + +R   +  G   +    L   + L +  
Sbjct: 26  MLRSGFMR-QLSSGIYVYLPLGYRVLRKIENIVREEMDKSGAQEVHMSALMPKE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
                    +F ++D + +   L  
Sbjct: 84  GRWAVFGPEMFRVKDRNEREYCLGP 108



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 34/108 (31%), Gaps = 2/108 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +     +++     D +         + L+  G+   +     +  G + K AD 
Sbjct: 461 IWPITVAPYEVIIVPVNVKDENQNRIAFEIYENLQRNGVEVLIDDRDERA-GVKFKDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P  +  G    S G L+I++    +    EI+         + + 
Sbjct: 520 IGIPFRVTVGKK-ISEGKLEIRNRRTKESFEVEIEKAIEVVINLIREE 566


>gi|226306102|ref|YP_002766062.1| prolyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259511615|sp|C0ZY88|SYP_RHOE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226185219|dbj|BAH33323.1| prolyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 581

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 33/103 (32%), Gaps = 2/103 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +   + D  +    +     L  AG+   +      + G + K
Sbjct: 473 DEKGLRWPAEVSPADVYLVIANKDETAREGAEGLAAQLDRAGLEVILD-DRKASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            ++    PL ++ G    + G ++I+D   G+    +  +   
Sbjct: 532 DSELIGVPLIVVVG-RGWADGKVEIRDRFTGESREIDADSAIE 573


>gi|302497531|ref|XP_003010766.1| hypothetical protein ARB_03468 [Arthroderma benhamiae CBS 112371]
 gi|291174309|gb|EFE30126.1| hypothetical protein ARB_03468 [Arthroderma benhamiae CBS 112371]
          Length = 764

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 50/481 (10%), Positives = 116/481 (24%), Gaps = 67/481 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  + +           +F 
Sbjct: 345 GCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNM--YDVGIWRQSGHWAHYKDDMFK 402

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+                              +R        F    + +
Sbjct: 403 L-DVEKRDWALKPMNCPG-------------HCIMFGHRERSYRELPLRMADFGVLHRNE 448

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I      +    R I         L    +  +
Sbjct: 449 ASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGFSFKLKLSTRPEK 508

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L  L   D  +    + +         D   D   GA    +    +   L  + + + 
Sbjct: 509 YLGKLETWDFAEAQLREALTKF---KGADWEIDEGDGAFYGPKIDITISDALKREHQCAT 565

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L   +      E    E V  S     S   +   +  S   +     +         
Sbjct: 566 IQLDYQLPLNFKLEYMTGEAVPKSAAPATSKAEAKPAEGDSNPAQAQPSDSST------- 618

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                 + +PVV      G          +                             +
Sbjct: 619 --PGPGRARPVVIHRAIIGSFERFFGILIEHFG--------------------GKWPFWL 656

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                +++  M   +D + + Q     LR   +  ++ L S      +++          
Sbjct: 657 SPRQILIVPVMASANDYVEELQEI---LRGDKLNVDIDL-SGHTMQKKIRNGQLAQYNFI 712

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            + G  E+    + I++                   ++     +P+ E  + ++ + +E 
Sbjct: 713 FVVGAQEKESRSVNIRNRDD--------------PSSQTKGSLVPLEEARAKLRALRKER 758

Query: 493 K 493
           +
Sbjct: 759 R 759


>gi|164686598|ref|ZP_02210626.1| hypothetical protein CLOBAR_00190 [Clostridium bartlettii DSM
           16795]
 gi|164604327|gb|EDQ97792.1| hypothetical protein CLOBAR_00190 [Clostridium bartlettii DSM
           16795]
          Length = 566

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     IR+  ++ D IR      G   I   LL  ++ L +     D  
Sbjct: 26  MIRKMASGIYNQLPMGIRVFRKVEDIIREEMNAKGAQEISCALLVPAE-LWQESGRWDVM 84

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F L+D +G+   L  
Sbjct: 85  GPEMFRLKDRNGRDYCLGP 103



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 4/113 (3%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYAD 425
                I     V++       + L   +   + L  AG+   +   + +  F    K +D
Sbjct: 456 IWPLAIAPYHVVVVPVNVKKEEHLENAEKIYKELEAAGVEVLLDDRNERAGFK--FKDSD 513

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
               P+ I  G      G ++ K   +  +    +       +A  A+  + +
Sbjct: 514 LLGIPMRITVGKD-IVDGKVEFKLRKEADKEIISVDEVLDRVKAEFAKNNVKL 565


>gi|172057852|ref|YP_001814312.1| prolyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|226701289|sp|B1YI68|SYP_EXIS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171990373|gb|ACB61295.1| prolyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 566

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 42/153 (27%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ ++I   IR   E  G   +  P ++ ++ L +     D     +  L
Sbjct: 38  GIYSYLPLAKRVLSKIETIIRQEMEGAGAQELLMPAIQPAE-LWEETGRWDIYGPELMRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRFR 126
            D   +  +L     +L   + R    ++  +          YR     R        F 
Sbjct: 97  TDRHDRRFALGATHEELITSIVRDELNSYKKLPVNLFQIQMKYRDERRPRFGLLRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                   +   S E     M          VG
Sbjct: 157 MKDAYSFHSTQESLEEEYQNMFDAYTKIFTRVG 189



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 2/103 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I      LI     +++ L   +   + L  AG          +  G +   AD 
Sbjct: 460 IWPKAIAPFDVHLIAVNGKNAEQLEVAETVYRELTAAGFSVLFDDRKERA-GVKFADADL 518

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              P+ I  G      G++++K    G+    +  +      +
Sbjct: 519 IGLPVRINVGKK-APDGIVELKARRGGEAEEIQQADLLEAVRS 560


>gi|312134020|ref|YP_004001359.1| pros [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773326|gb|ADQ02814.1| ProS [Bifidobacterium longum subsp. longum BBMN68]
          Length = 604

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +  ++     V +     D+ +    +     L   G+          + G + K
Sbjct: 492 DEAGLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFK 551

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    PL  + G    + G ++++D   G+
Sbjct: 552 DAELIGVPLVAVVGRDYVNDGTIELRD-RNGE 582



 Score = 43.7 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +R+ N+I   IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 47  WLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 102

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 103 DRHEADYLLAP 113


>gi|154502817|ref|ZP_02039877.1| hypothetical protein RUMGNA_00631 [Ruminococcus gnavus ATCC 29149]
 gi|153796700|gb|EDN79120.1| hypothetical protein RUMGNA_00631 [Ruminococcus gnavus ATCC 29149]
          Length = 642

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L   Q     L  AGIRAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVKVLPISDKYLEYGQSVLDQLNAAGIRAEID-TRAEKIGYKIREAQMKKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E     + ++    G E  + ++   +      A+  I
Sbjct: 592 VVGAKEEEEKKVSVRSRFAGDEGQKGLEEFIAAIMEETAKKEI 634



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + ++N +LD  R I+   G+  I TP++  S  L +     D   + +++ 
Sbjct: 260 GFPFFLPNGMVLKNVLLDYWREIHRKAGYVEISTPVM-LSRHLWETSGHWDHYKENMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 VI-DEEDFAIKPMNCPG 334


>gi|322689774|ref|YP_004209508.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|322691722|ref|YP_004221292.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456578|dbj|BAJ67200.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320461110|dbj|BAJ71730.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 614

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +  ++     V +     D+ +    +     L   G+          + G + K
Sbjct: 502 DEAGLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFK 561

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    PL  + G    + G ++++D   G+
Sbjct: 562 DAELIGVPLVAVVGRDYVNDGTIELRD-RNGE 592



 Score = 43.7 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +R+ N+I   IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 57  WLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 112

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 113 DRHEADYLLAP 123


>gi|326773248|ref|ZP_08232531.1| threonine--tRNA ligase [Actinomyces viscosus C505]
 gi|326636478|gb|EGE37381.1| threonine--tRNA ligase [Actinomyces viscosus C505]
          Length = 683

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +        LR  G+R E+     + FG +++   +   P  +
Sbjct: 572 WLSPVQVRLIPVAEAFDAYVDDVAAQLRAQGVRVEVDHSDDR-FGKKIRNTSKDKIPFTL 630

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +   G +  +    G++ +                  +P+ E V+ +  ++    
Sbjct: 631 IAGGEDAEAGAVSFR-FRDGQQTNG-----------------VPVKEAVAHIVSVIDARI 672

Query: 494 EE 495
            +
Sbjct: 673 ND 674


>gi|254503109|ref|ZP_05115260.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Labrenzia alexandrii DFL-11]
 gi|222439180|gb|EEE45859.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Labrenzia alexandrii DFL-11]
          Length = 384

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 30  LDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTA 89
           +D++ N+++  G  P+  P+L+ ++ L   + ++ R  + ++  Q  DG  + LR D T 
Sbjct: 15  IDAVLNLFQAAGHAPVSPPMLQPANVLLDLIGEDIR--RRLYLTQGADGADLCLRPDFTI 72

Query: 90  PLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           P+ R+          P      GPVFR    G
Sbjct: 73  PVCRHHVAYG-DNTLPTGYCYHGPVFRQRPDG 103


>gi|213691491|ref|YP_002322077.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213522952|gb|ACJ51699.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320457566|dbj|BAJ68187.1| prolyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 604

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +  ++     V +     D+ +    +     L   G+          + G + K
Sbjct: 492 DEAGLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVSELEAKGLEVIYDDRKKVSPGVKFK 551

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    PL  + G    + G ++++D   G+
Sbjct: 552 DAELIGVPLVAVVGRDYVNDGTIELRD-RNGE 582



 Score = 43.7 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +R+ N+I   IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 47  WLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 102

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 103 DRHEADYLLAP 113


>gi|189440768|ref|YP_001955849.1| prolyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189429203|gb|ACD99351.1| Prolyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 604

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +  ++     V +     D+ +    +     L   G+          + G + K
Sbjct: 492 DEAGLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFK 551

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    PL  + G    + G ++++D   G+
Sbjct: 552 DAELIGVPLVAVVGRDYVNDGTIELRD-RNGE 582



 Score = 43.7 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +R+ N+I   IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 47  WLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 102

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 103 DRHEADYLLAP 113


>gi|23466273|ref|NP_696876.1| prolyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227546627|ref|ZP_03976676.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|81847214|sp|Q8G3N0|SYP_BIFLO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|23327022|gb|AAN25512.1| prolyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227212944|gb|EEI80823.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|291516313|emb|CBK69929.1| prolyl-tRNA synthetase, family II [Bifidobacterium longum subsp.
           longum F8]
          Length = 597

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +  ++     V +     D+ +    +     L   G+          + G + K
Sbjct: 485 DEAGLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFK 544

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    PL  + G    + G ++++D   G+
Sbjct: 545 DAELIGVPLVAVVGRDYVNDGTIELRD-RNGE 575



 Score = 43.7 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +R+ N+I   IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 40  WLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 95

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 96  DRHEADYLLAP 106


>gi|332523222|ref|ZP_08399474.1| threonine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314486|gb|EGJ27471.1| threonine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 648

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/381 (9%), Positives = 103/381 (27%), Gaps = 16/381 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   + +         + D+       +  +  +  M       V 
Sbjct: 284 KELASGYQHVYTPPMASVDFYKTSGHWDHYRDDMFPTMDMGDGEEFVLRPMNCPHHIEVY 343

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 344 KHHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRAL 403

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                D  +  NLT +    +      D EK         K     +   +E+ V     
Sbjct: 404 QL-IIDVYEDFNLT-DYRFRLSYRDPNDTEKYFDNDEMWEKAQSMLKAALDEMGVDYFEA 461

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
                                  T    +     P   + +     G             
Sbjct: 462 EGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGE------------ 509

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +     S       + +++ + +         V +  + +++  +       ++
Sbjct: 510 EHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEA-HVDYAWEVAKI 568

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+RA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 569 LRDKGVRADVD-ERNEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTET 627

Query: 460 IKNNESWREARVAQITIPISE 480
           I+       A +A+ + P+ E
Sbjct: 628 IEQFVETILADIARKSKPVVE 648



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 47/186 (25%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   D   K     D     +F  
Sbjct: 262 GLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPMASVD-FYKTSGHWDHYRDDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+   LR             +  +    P R   +G + R EK          R 
Sbjct: 321 MDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +        ++ D  E   +    + +   +    +   +   + 
Sbjct: 381 MTLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFNLTDYRFRLSYRDPNDTEKYFDNDEMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 EKAQSM 446


>gi|46190981|ref|ZP_00120791.2| COG0442: Prolyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|317482435|ref|ZP_07941452.1| prolyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916095|gb|EFV37500.1| prolyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 594

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +  ++     V +     D+ +    +     L   G+          + G + K
Sbjct: 482 DEAGLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFK 541

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    PL  + G    + G ++++D   G+
Sbjct: 542 DAELIGVPLVAVVGRDYVNDGTIELRD-RNGE 572



 Score = 43.7 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +R+ N+I   IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 37  WLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 92

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 93  DRHEADYLLAP 103


>gi|71903081|ref|YP_279884.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|123734122|sp|Q48US7|SYT_STRPM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71802176|gb|AAX71529.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 647

 Score = 60.6 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/378 (9%), Positives = 100/378 (26%), Gaps = 16/378 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +         Q D+  V    +  +  +  M       V 
Sbjct: 282 KELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVY 341

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 342 KNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRAL 401

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   +  +  ++  E+ +   +  K   +  +  +  
Sbjct: 402 QLIIDVY---ADFNLTDYRFRLSYRDPNDTRKYYDNDEMWENAQSMLKAALD-EMGVDYF 457

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 458 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 506

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 507 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKT 566

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+RA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 567 LRDRGVRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTES 625

Query: 460 IKNNESWREARVAQITIP 477
           ++       A +A+ + P
Sbjct: 626 VEEFVENILADIARKSCP 643



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 75/323 (23%), Gaps = 25/323 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F +
Sbjct: 260 GLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPV 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N           I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVRSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    I      I    ++ L  I++            
Sbjct: 359 GMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNLTDYRF 418

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           RL      D    +    +             +          +       L I ++ ++
Sbjct: 419 RLSYRDPNDTRKYYDNDEMWENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDIQVKTAL 478

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               E +                 + +   G     + I   ++  +E +T  + E   G
Sbjct: 479 -GNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKG 535

Query: 313 FPVMNEKQKPVVFGSVGGGGRYD 335
                     V    +      D
Sbjct: 536 AFPTWLAPHQVTVIPISNEAHID 558


>gi|326477787|gb|EGE01797.1| threonyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 763

 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 49/481 (10%), Positives = 113/481 (23%), Gaps = 68/481 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  + +           +F 
Sbjct: 345 GCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNM--YDVGIWRQSGHWAHYKDDMFK 402

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+                              +R        F    + +
Sbjct: 403 L-DVEKRDWALKPMNCPG-------------HCIMFGHRERSYRELPLRMADFGVLHRNE 448

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I      +    R I         L    +  +
Sbjct: 449 ASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGFSFKLKLSTRPEK 508

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L  L   D  +    + +         D   D   GA    +    +   L  + + + 
Sbjct: 509 YLGKLETWDFAEAQLREALTKF---KGADWEIDEGDGAFYGPKIDITISDALKREHQCAT 565

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L   +      E                        ++   +           EA   
Sbjct: 566 IQLDYQLPLNFKLE-----------------------YMTGETIPKSAAPANPKAEAKPE 602

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                 + +P             G           A   S      I+           +
Sbjct: 603 GDSNPTQAQP-------SDSSTPGPGRARPVVIHRAIIGSFERFFGILIEHFGGKWPFWL 655

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                +++  M   +D + + Q     LR   +  ++ L S      +++          
Sbjct: 656 SPRQILIVPVMASANDYVEELQEI---LRGDKLNVDIDL-SGHTMQKKIRNGQLAQYNFI 711

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            + G  E+    + I++                   ++     IP+ E  + ++ + +E 
Sbjct: 712 FVVGAQEKESRSVNIRNRDD--------------PSSQTKGSLIPLEEARAKLRALRKER 757

Query: 493 K 493
           +
Sbjct: 758 R 758


>gi|302335586|ref|YP_003800793.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli
           DSM 7084]
 gi|301319426|gb|ADK67913.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli
           DSM 7084]
          Length = 588

 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 9/128 (7%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
              GF      + + ++  E           V +  +     +        + LR AG+R
Sbjct: 462 HRAGFGSFERFIGMLIEQYEGKFPTWLSPCQVKVLPVS--EKTRDYALEVARTLRAAGVR 519

Query: 407 AEMFLGSSK---NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            ++ +   K         + ADR   P  +I G  E     + ++D    +     +++ 
Sbjct: 520 VKVDVRDEKIGYKIREA-RSADR--VPYMLILGEKEAEANNISVRD-RSNETHQATLEDF 575

Query: 464 ESWREARV 471
            +   A +
Sbjct: 576 VTEITAEI 583



 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       +R+RN ++D  + + + +G++ ++TP++  S +L +     D     +++ 
Sbjct: 214 GFPFWLPNGMRVRNALMDYWQEMQDRFGYEQVQTPII-LSRTLWETSGHWDHYKDNMYTT 272

Query: 74  QDDDGQWISLRYDLTAPLA 92
           Q  D +  +++        
Sbjct: 273 QI-DDEDFAIKPMNCPGAC 290


>gi|239621659|ref|ZP_04664690.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|239515534|gb|EEQ55401.1| prolyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
           52486]
          Length = 607

 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +  ++     V +     D+ +    +     L   G+          + G + K
Sbjct: 495 DEAGLAWPSVIAPAAVHVVATGKDAVAFEGAEKLVAELEAKGLEVIYDDRKKVSPGVKFK 554

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    PL  + G    + G ++++D   G+
Sbjct: 555 DAELIGVPLVAVVGRDYVNDGTIELRD-RNGE 585



 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                +R+ N+I   IR      G   +  P L   E  ++  ++    D     +F L+
Sbjct: 50  WLPLGLRVLNKIEAIIREEINGIGAQEVHFPALLPREPYEATHRWEEYGDN----IFRLK 105

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 106 DRHEADYLLAP 116


>gi|302541133|ref|ZP_07293475.1| threonine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302458751|gb|EFL21844.1| threonine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 659

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/401 (10%), Positives = 101/401 (25%), Gaps = 45/401 (11%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
              +    R       +           +  +                        L+A+
Sbjct: 292 RKEMEDYSRKRHEESGYEFVNSPHITKAKLFETSGHLPHYMDGMFPPMEFEGQDYYLKAM 351

Query: 159 GIKRNDYHIGINNRKILDG---ILEKIGLHGDDKLNERLIVLRAI-----DKLDKFGLQG 210
               ++       R   +    + E   ++  +K      + RA      D       + 
Sbjct: 352 NCPMHNLIFRARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDSHIYCTKEQ 411

Query: 211 VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN 270
           +   L    T    D  +   L    +++     S        +  E  +      +   
Sbjct: 412 MADELDNLLTFVL-DLLRDYGLNDFYLELSTRDDSDKFMGEPEQWEEATEELRKAAEKQG 470

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
             +V+             ++    I R  +  T    +     P     +          
Sbjct: 471 LELVMDPGGAAFYGPKISVQAKDAIGRTWQMST---IQVDFNQPARFNLEYTAA------ 521

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
               DG   +    +    G    I R    L    +       + PV    +      +
Sbjct: 522 ----DGSRQQPVMLHRALFGS---IERFFAVLLEHYAGAFP-AWLAPVQAVGIPIGDGHV 573

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              + +    R  G+R E+   S +    +++ A R   P  +I G  + + G +  +  
Sbjct: 574 PYLEEFAAQARAKGLRVEVDSSSDR-MQKKIRNAQRSKVPFMVIAGDEDVAAGAVSFRY- 631

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             G + +                  IPI E ++ +  +++ 
Sbjct: 632 RDGSQKNG-----------------IPIDEAIAEIIDVVER 655


>gi|73748213|ref|YP_307452.1| prolyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|114152188|sp|Q3ZZD0|SYP_DEHSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|73659929|emb|CAI82536.1| prolyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 569

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 46/380 (12%), Positives = 101/380 (26%), Gaps = 22/380 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           + A+L  G         R   +I + IR      G   +  P+L+  +   +    E   
Sbjct: 31  MIAQLTAGVYSFMPLAWRSIQKIENIIRQEMNKAGCQELAMPVLQPVEIWQQS-GREAPF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEK 119
            + +F L+D   + + L     ++   LA    +++  +       +      P  R   
Sbjct: 90  GQTLFHLKDRKDRNLVLGPTHEEVITDLASRYIQSYRDLPQRLYQIQAKFRDEPRPRGGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN--DYHIGINNRKILDG 177
                F        D      + +   M           G++    D   G    K    
Sbjct: 150 IRVREFIMKDMYSFDASPEGLDDSYQTMKQAYESVYRRCGLESMVIDADSGAIGGKASHE 209

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            +       D  +        A  +   F  + +     +       D  + A    + I
Sbjct: 210 FMIVAESGEDSIIYCPKCSYAANAEKAVFKKKTLPKETLK-------DLEEVATPGQKAI 262

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  FL++  E ++  ++ +  G         +L +    ++     ++        V+
Sbjct: 263 SDVARFLAVKPENTLKAVFYMADGKFVMAVIRGDLDINEIKLKNLLKCNDLRLAEDGEVK 322

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
                 G      L   ++          +   G   DG             G      +
Sbjct: 323 AAGVVAGSASPVGLKNILIVADDSVENGSNFVAGANKDGF-----HLKNVNCGRDFRADK 377

Query: 358 LIVALKSLESSTNNIKEMGP 377
           +     + E S     +   
Sbjct: 378 MADIALAAEGSACPFCDGTF 397



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/198 (8%), Positives = 45/198 (22%), Gaps = 13/198 (6%)

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
            ++      +        +      + C +           +   +         R+   
Sbjct: 363 HLKNVNCGRDFRADKMADIALAAEGSACPFCDGTFASKRGVEVGHIFKLGTFLSERFGAN 422

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLES--------STNNIKEMGPVLITTMDHDSDS 389
            +  +G + P      G+    +   ++E             I      +      +   
Sbjct: 423 FTDAEGVSHPIIMGCYGMGVGRLLAAAIEQNHDEKGIIWPMPIAPYQVYICGLFLDNPVV 482

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNF--GNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
               +     L   GI         +    G +   AD    PL +        +G ++ 
Sbjct: 483 RESAEKIYAELEAKGIEVLFD---DRELTAGVKFNDADLLGIPLRLTISPRNLDKGGVEF 539

Query: 448 KDLAKGKELSREIKNNES 465
           K     +     + +   
Sbjct: 540 KLRRNKESELVPLDSIVE 557


>gi|330877991|gb|EGH12140.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 412

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|323144099|ref|ZP_08078739.1| proline--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416114|gb|EFY06808.1| proline--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 593

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 46/157 (29%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G        +R+  ++   IR      G   +  P ++ +D L K     ++    
Sbjct: 55  QIASGIYVWLPTGMRVLQKVEKIIREELNRAGAIELFMPFVQPAD-LWKESGRYEKYGPE 113

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  L+D       L     ++   +AR   ++   +          +R     R      
Sbjct: 114 LCRLKDRKKNEFVLGPTHEEVITAIARREIKSARQLPINLYQIQTKFRDEIRPRFGVMRG 173

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F            +S E    +M    +     +G
Sbjct: 174 REFIMKDAYSFHIDHASLEKTYKDMYDAYSRIFTRLG 210



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/129 (10%), Positives = 32/129 (24%), Gaps = 3/129 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTM--DHDSDSLSK 392
           DG     +          +  + +            +      V I  +  +        
Sbjct: 456 DGKPINMQMGCYGIGVTRVIAAAIEQHHDDKGIIWPDSMAPFQVAIVAIKPNKSQAVREA 515

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L   G+   ++    +  G      +    P  I  G    + G ++ K    
Sbjct: 516 AEKLYAELEAKGVEV-LYDDRDERPGVMFADMELIGIPHVITIGDRGLAAGSVEYKSRKT 574

Query: 453 GKELSREIK 461
           G++    + 
Sbjct: 575 GQKEEVSVD 583


>gi|229817161|ref|ZP_04447443.1| hypothetical protein BIFANG_02420 [Bifidobacterium angulatum DSM
           20098]
 gi|229784950|gb|EEP21064.1| hypothetical protein BIFANG_02420 [Bifidobacterium angulatum DSM
           20098]
          Length = 637

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 36/127 (28%), Gaps = 18/127 (14%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +  +      V +     D  +    +     L   G+          + G + K
Sbjct: 529 DERGLAWPSCIAPAQVHVVATGKDEKAFEGAEQLIAELEAKGVEVIFDDRKKVSPGVKFK 588

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A+    P   + G    + G ++I+D                       ++ +P +E V
Sbjct: 589 DAELIGVPQIAVVGRDYVNDGTIEIRD------------------RNGDNKVIVPAAEAV 630

Query: 483 STVKKIL 489
            T+   +
Sbjct: 631 ETLLARI 637



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                + + N+I + IR    +     +    L   E  ++  ++    D     +F L+
Sbjct: 77  WLPLGLNVLNKIENIIREEMASINAQEVHFSGLLPREPYEATHRWEEYGDN----IFRLK 132

Query: 75  DDDGQWISLRY 85
           D       L  
Sbjct: 133 DRHEADYLLAP 143


>gi|42781481|ref|NP_978728.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|42737404|gb|AAS41336.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 640

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/219 (10%), Positives = 63/219 (28%), Gaps = 5/219 (2%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    +    +        G ++L   +E    +  +S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFQYEVELSTRPEDSMGDDKLWEQAESALANVLHSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +   +  G +++ A  +  P  ++ G  E   G + ++
Sbjct: 575 DV-RDEKLGYKIREAQMQKIPYVLVIGDKELENGAVNVR 612



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   K           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYKYQEVRTPFMMNQELWEKS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|312089889|ref|XP_003146412.1| hypothetical protein LOAG_10840 [Loa loa]
 gi|307758424|gb|EFO17658.1| hypothetical protein LOAG_10840 [Loa loa]
          Length = 798

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 66/441 (14%), Positives = 137/441 (31%), Gaps = 32/441 (7%)

Query: 17  DCPT-KEIRIRNRILDSIRNIYENYGFDPIE----TPLLEYSDSLGKFLPDEDRPNKG-V 70
           D  +   +R    + + +  I   + F P +    TP              E   +K   
Sbjct: 200 DWLSLPRLRAIEYLRNKLCRICSTHAFIPFDVHSITP-------FNAKNATEMINSKSHA 252

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT-YRIGPVFRNEKHGPGRFRQFI 129
               D++G  + L YDL    ARY   N    +         G         P    +F 
Sbjct: 253 CRFIDENGITVMLSYDLRRAFARYCVRNGVNRLKRYGCGKVFGRPDALVSMHPVERIEFA 312

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
              +    S+       +C+ +    +   I    + I + +R ++      +G    + 
Sbjct: 313 IDAIGPASSAQMLTADILCITVEAAHQLDSISSRKWEIRLGHRDLVIATALYLGFGDFNT 372

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
            N+ L +L +I   +K      K+      T+ S +         E     +  L    E
Sbjct: 373 QNKILNILYSIATSNKMLSHEQKIERLRVGTEMSFNQANSLLNVLEGDGCTLEALVARTE 432

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKS--GYNSNRIKISSTIVRGLEYYTGCVY 307
             ++   + V+     +K  ++L  ++ L+         + +   +   R   Y +G ++
Sbjct: 433 CLVNCRDDRVRRH--AKKALDDLTDLAVLLECFIDNMTEHILFDGTFCYRPHTYCSGLMF 490

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +  + F      ++ +    +G GGRYD L+   +          +      + L  L  
Sbjct: 491 QIRVLFL----HRQRIQPVIIGAGGRYDTLLEDERHAQDLVPPSPLCAVGCSLPLDILAQ 546

Query: 368 STNNIKEMGPV---LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-- 422
                K                   L       + + + GI+A++          Q+   
Sbjct: 547 FCCRNKPDFGSVSGQALVCSVSDQLLKTTANLVKQMWSRGIQADILHHPVAPM--QIAEL 604

Query: 423 --YADRRNCPLAIIQ-GTGER 440
             + +  N  L ++  G  E 
Sbjct: 605 DMHCNETNIELLLMVYGEDEV 625


>gi|256819829|ref|YP_003141108.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581412|gb|ACU92547.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 647

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 36/111 (32%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +              +       +  Q   
Sbjct: 508 NEMHRPVMIHRAPFGSMERFVAILLEHTAGNFPLWLNPSQA--IVLSLSEKYENYAQKVL 565

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           ++L  + IR  +    ++  G +++ A+ +  P  +I G  E   G + ++
Sbjct: 566 RLLENSDIRTLID-NRAETMGKKIREAETQKIPYMLIVGENEEKEGTVSVR 615



 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   +R R+   +R   +  G++ + TP + + +         D+  K  F
Sbjct: 261 GLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIGHKNLYVTS-GHWDKYGKDSF 317


>gi|116180492|ref|XP_001220095.1| hypothetical protein CHGG_00874 [Chaetomium globosum CBS 148.51]
 gi|88185171|gb|EAQ92639.1| hypothetical protein CHGG_00874 [Chaetomium globosum CBS 148.51]
          Length = 758

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 13/120 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS- 72
           G         RI NR++D +R  Y  YGF  + TP + Y  +L       +  +  +++ 
Sbjct: 8   GSPILLPNGARIFNRLIDFLRQQYVRYGFQEVITPTI-YKKALWAKSGHLENYSDDMYTV 66

Query: 73  ---------LQDDDGQ-WISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
                    + D   +    L+          + ++       P R     P+ RNE  G
Sbjct: 67  TSTSPSRAEVTDRGEEAEYGLKPMNCPGHCLIFASQTRSYRDLPIRYADFSPLHRNEISG 126


>gi|87124051|ref|ZP_01079901.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86168620|gb|EAQ69877.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 612

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 1/96 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +    + L+  Q  +  LR AGIRA +   S +  G  ++  ++   PL  + G  
Sbjct: 509 QIRLLPVTDEVLADAQQLSDQLRAAGIRATVD-RSGERLGKLIRTGEQMKIPLLAVIGAK 567

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           E  +G + ++    G   S   K           + 
Sbjct: 568 EAEQGSVSLRSRRDGDLGSVNRKALIEAASQANQER 603



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 4/110 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      +  R+R  I D  R  +   G+D + TP +  +D  L K     D  ++ +F 
Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYDLLYTPHV--ADIGLWKTSGHLDFYSESMFG 286

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
               D +   L+           A    +    P R   +G V+R E+ G
Sbjct: 287 PMQVDEREYQLKPMNCPFHVLTYASRLRSYRELPIRWAELGTVYRYERPG 336


>gi|330464914|ref|YP_004402657.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328807885|gb|AEB42057.1| prolyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 583

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 31/101 (30%), Gaps = 2/101 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +         L         L  AG+R  +      + G +  
Sbjct: 475 DERGLVWPTSVAPCDVHLVAAGKGPQ-LDAAVDLGAQLAAAGLRVLVDDRVGVSAGVKFT 533

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            A+    P  ++ G    + G ++++D A G+ +   + + 
Sbjct: 534 DAELIGIPRTVVVGRR-LADGYVELRDRATGERVELSLPDL 573



 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  + +R+ + +R      G   +  P L  ++   +           +F+L D  
Sbjct: 44  WLPLGKLVLDRVSEIVRAEMAAIGGQEVHFPALLPAEPY-RTSGRWTEYGDDIFTLADRR 102

Query: 78  G 78
           G
Sbjct: 103 G 103


>gi|119873200|ref|YP_931207.1| threonyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|166225488|sp|A1RV82|SYT_PYRIL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119674608|gb|ABL88864.1| Anticodon-binding domain protein [Pyrobaculum islandicum DSM 4184]
          Length = 609

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 69/243 (28%), Gaps = 8/243 (3%)

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           +E IDI      +   +        V      E+ + E       + K       ++I  
Sbjct: 346 AEAIDISFKLHEVIFREIEKLGRTYVSLYNVTEEFYKEYKNYLIELAKREGKPILVRILP 405

Query: 294 TIVRGLEYYTGCVYEAILG-------FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
                            LG       F +     K      V    +    V        
Sbjct: 406 GQKYYWVLNVEFHIIDELGRPREIATFQIDIGNAKRFGIKYVDENNQVRYPVIIHTAILG 465

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               +   +   +   +           + PV +  +    D+L         L T GIR
Sbjct: 466 SVERYLYVVFDTMAKAEKAGKIPRLPTWLSPVQVRIIPITRDNLKYAVEIADKLETEGIR 525

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            ++     +    +++ A+    P   + G+ E + G+L +++   G+  +   +  +  
Sbjct: 526 VDID-DRDETLSKKIRDAEVSWIPYICVVGSKEETEGVLSVRERGGGQYKTTPEELIKKI 584

Query: 467 REA 469
           +E 
Sbjct: 585 KEE 587


>gi|33519754|ref|NP_878586.1| prolyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|81836111|sp|Q7VRC8|SYP_BLOFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33504099|emb|CAD83360.1| prolyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 581

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/350 (10%), Positives = 90/350 (25%), Gaps = 5/350 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R+  +I + I       GF  I  P+ + ++ L K        
Sbjct: 31  MVRQISSGVYTWLPTGLRVLKKIENIIHEEMNKIGFLEIFMPITQPAN-LWKQSGRWSEY 89

Query: 67  NKGVFSLQDDDGQWISLRY----DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
              +   ++   Q   L       +T  +   +  +    +   +           + G 
Sbjct: 90  GLELLRFKNRTNQKFVLGPTHEEMITDLVCNEILSHKQFPIKLYQINTKYRDEARPQFGV 149

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            R ++FI  D  +     ++ +     +              + +   +   + GI+   
Sbjct: 150 IRSKEFIMKDGYSFHIHQKSLEDTYYNIYQQYHIIFKRIGLKFCVVQADPGNIGGIVSHE 209

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                +       +       D   +   K         +  +  +   LTS     ++ 
Sbjct: 210 FQAYYNNTQNETAIFTETFNKDMSNINTRKNNDIVINNIHILNTIQTIKLTSADFHNLII 269

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
              I+  KS  +            K     +          +N  ++     I+  +   
Sbjct: 270 MRLINYYKSFIQETIKNIIIYIKNKNNIYNLHRIATQAYEKFNDLKLVKIPDIIIPISIL 329

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
                E  L    +     P++         YD +              +
Sbjct: 330 NKKNIEIKLNLLKLINTPVPLMINYNVATAMYDFIFHNININKNYCMKIN 379


>gi|320531911|ref|ZP_08032821.1| prolyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320135880|gb|EFW27918.1| prolyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 610

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 35/134 (26%), Gaps = 18/134 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN--Q 420
                +         V +     D             L   G   E+     +      +
Sbjct: 493 DDKGLTWPVQIAPYHVQVLATGKDQAVFDVAGQIASSLDADG--VEVLYDDRRKVSAGVK 550

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
              A+    P  ++ G      G ++I+D   G+  S       +              E
Sbjct: 551 FADAELLGLPYTVVVGRDLAREGTVEIRDRRTGEHRSVPADAAAT--------------E 596

Query: 481 LVSTVKKILQENKE 494
           L +TV+  L+  + 
Sbjct: 597 LSATVRAALETARR 610



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   +I D +R   +  G   +  P L  ++         D     +F L
Sbjct: 40  GVYTWLPLGLRTLRKIEDIVRQEMDAMGGQEVHFPALLPAEPYQA-TGRWDDYGPTLFKL 98

Query: 74  QDDDGQWISLRY 85
           +D       L  
Sbjct: 99  RDRKDGDYLLAP 110


>gi|262382112|ref|ZP_06075250.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|298375301|ref|ZP_06985258.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|262297289|gb|EEY85219.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|298267801|gb|EFI09457.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 651

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 53/462 (11%), Positives = 108/462 (23%), Gaps = 82/462 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +  P                  NK ++ 
Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCP---------------PIGNKLLY- 304

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                  G   +  K          + +
Sbjct: 305 ------------------------------------ITSGHYAKYGKDSFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      + + +             R    G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCMIYKNSPRSYKDL-----------PLRLAEFGTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKQEFLNVMDIISIVFKTMNFENFEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DENWEKAEQAIVEACEEKGLKAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   + +              D    R    +    G       + V ++        
Sbjct: 495 NLPERFQLEYTGA----------DNQKHRPVMIHRAPFGSM--ERFVAVLIEHTAGKFPL 542

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  M              + L    IRA +    ++  G +++  + +  P 
Sbjct: 543 WLTPEQVCI--MPISEKFNDYAWQIARELGNQEIRAIVD-DRNEKIGRKIRDNELKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +I G  E   G + ++   +G + S +I    +     V +
Sbjct: 600 MLIVGEKEAENGEVSVRKQGEGDKGSMKIATFAALLNGEVEE 641


>gi|119504253|ref|ZP_01626333.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119459761|gb|EAW40856.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 569

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 43/153 (28%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R+  R+   +R      G   I  P+++ ++   +     ++    +  L
Sbjct: 38  GIYNWMPLGLRVIRRVEKVVREEMCRAGALEISMPVVQPAELWLES-GRWEQYGPELARL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRFR 126
           QD   +   L     ++   L R   +++  +          +R     R        F 
Sbjct: 97  QDRHNRDFCLGPTHEEIITALGRSEIKSYKQLPLNFFQIQTKFRDEIRPRFGVMRSREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                       S E     M          +G
Sbjct: 157 MKDAYSFHADQVSLEQTYWRMHEAYTAIFTRLG 189


>gi|327392821|dbj|BAK10243.1| Prolyl-tRNA synthetase ProS [Pantoea ananatis AJ13355]
          Length = 572

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRVADRHERPFVLGP 108



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 26/107 (24%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K   +     LR  G+   +     +  G  
Sbjct: 461 DDRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYNTLRAKGVEVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +      + 
Sbjct: 520 FADMELIGVPHTIVIGDRNLDNQEIEYKARRAGEKQMIKQDEIVEFL 566


>gi|302340220|ref|YP_003805426.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301637405|gb|ADK82832.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 562

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 51/191 (26%), Gaps = 8/191 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++  ++   IR   +  G   +  PL+  +D   +   +    ++ +   
Sbjct: 38  GLYSYLPLGVKVVEKLRKIIREEMDRLGGQEVSVPLVNPADIWKRSGREHLI-DRAMIRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRFR 126
            D  G+   L     +    LARY   ++           R +R     R        F 
Sbjct: 97  SDRSGRRYVLSPSHEEAFVELARYGLRSYRDFPVLLFQFQRKFRDEERVRQGLVRLKEFE 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      ++      +M           G+       G+   +        +  + 
Sbjct: 157 MKDAYSFHRSATALNNFFPKMFAAYERIFSRCGLDILTAESGVGYMRGEKAYEFLLPSNL 216

Query: 187 DDKLNERLIVL 197
            D +     V 
Sbjct: 217 GDDVVMSCPVC 227


>gi|291616370|ref|YP_003519112.1| ProS [Pantoea ananatis LMG 20103]
 gi|291151400|gb|ADD75984.1| ProS [Pantoea ananatis LMG 20103]
          Length = 572

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G   I  P+++ +D L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPAD-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 90  GPELLRVADRHERPFVLGP 108



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 26/107 (24%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K   +     LR  G+   +     +  G  
Sbjct: 461 DDRGIIWPAALAPFEVAILPMNMQKSFRVKELAEELYNTLRAKGVEVILDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +      + 
Sbjct: 520 FADMELIGVPHTIVIGDRNLDNQEIEYKARRAGEKQMIKQDEIVEFL 566


>gi|169334538|ref|ZP_02861731.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259255|gb|EDS73221.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM
           17244]
          Length = 637

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + +  R  +   G+  I+TPL+  ++ L       D     ++  
Sbjct: 262 GFPFFLPKGMVIRNELENFWREEHRKRGYQEIKTPLI-LNEQLWHTSGHWDHYKDNMY-F 319

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 320 TRIDDNDYAIKPMNCPG 336



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +     +L   +     L   GIR E+    S+  G +++ A     P  I
Sbjct: 535 WLAPVQAKLIPITDRNLEYVKGIKDKLEQKGIRCEID-DRSEKMGYKIREAQLEKVPYMI 593

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           I G  +   G++ ++    G+
Sbjct: 594 IAGDRDMENGVISVRARKDGE 614


>gi|149001905|ref|ZP_01826859.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147759714|gb|EDK66704.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 435

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 96/382 (25%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 67  RYIV--NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 124

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 125 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 184

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 185 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 242

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 243 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 289

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 290 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 349

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A +    P  +I G  E     + ++  
Sbjct: 350 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRY 406

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  + N      A +A
Sbjct: 407 GQKETQTVSVDNFVQAILADIA 428



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 50  GLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 108

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 109 MDMGDGEEFVLRPMNCP 125


>gi|326476791|gb|EGE00801.1| threonyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 753

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 49/481 (10%), Positives = 113/481 (23%), Gaps = 68/481 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  + +           +F 
Sbjct: 335 GCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNM--YDVGIWRQSGHWAHYKDDMFK 392

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+                              +R        F    + +
Sbjct: 393 L-DVEKRDWALKPMNCPG-------------HCIMFGHRERSYRELPLRMADFGVLHRNE 438

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I      +    R I         L    +  +
Sbjct: 439 ASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGFSFKLKLSTRPEK 498

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L  L   D  +    + +         D   D   GA    +    +   L  + + + 
Sbjct: 499 YLGKLETWDFAEAQLREALTKF---KGADWEIDEGDGAFYGPKIDITISDALKREHQCAT 555

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L   +      E                        ++   +           EA   
Sbjct: 556 IQLDYQLPLNFKLE-----------------------YMTGETIPKSAAPANPKAEAKPE 592

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                 + +P             G           A   S      I+           +
Sbjct: 593 GDSNPTQAQP-------SDSSTPGPGRARPVVIHRAIIGSFERFFGILIEHFGGKWPFWL 645

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                +++  M   +D + + Q     LR   +  ++ L S      +++          
Sbjct: 646 SPRQILIVPVMASANDYVEELQEI---LRGDKLNVDIDL-SGHTMQKKIRNGQLAQYNFI 701

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            + G  E+    + I++                   ++     IP+ E  + ++ + +E 
Sbjct: 702 FVVGAQEKESRSVNIRNRDD--------------PSSQTKGSLIPLEEARAKLRALRKER 747

Query: 493 K 493
           +
Sbjct: 748 R 748


>gi|301310685|ref|ZP_07216624.1| threonine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300832259|gb|EFK62890.1| threonine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 649

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 53/462 (11%), Positives = 108/462 (23%), Gaps = 82/462 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +  P                  NK ++ 
Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCP---------------PIGNKLLY- 304

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                  G   +  K          + +
Sbjct: 305 ------------------------------------ITSGHYAKYGKDSFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      + + +             R    G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCMIYKNSPRSYKDL-----------PLRLAEFGTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKQEFLNVMDIISIVFKTMNFENFEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DENWEKAEQAIVEACEEKGLKAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   + +              D    R    +    G       + V ++        
Sbjct: 495 NLPERFQLEYTGA----------DNQKHRPVMIHRAPFGSM--ERFVAVLIEHTAGKFPL 542

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  M              + L    IRA +    ++  G +++  + +  P 
Sbjct: 543 WLTPEQVCI--MPISEKFNDYAWQIARELGNQEIRAIVD-DRNEKIGRKIRDNELKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +I G  E   G + ++   +G + S +I    +     V +
Sbjct: 600 MLIVGEKEAENGEVSVRKQGEGDKGSMKIATFAALLNGEVEE 641


>gi|225864350|ref|YP_002749728.1| threonyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|225785860|gb|ACO26077.1| threonine--tRNA ligase [Bacillus cereus 03BB102]
          Length = 639

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+
Sbjct: 575 DMRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSDVIE 623



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/258 (10%), Positives = 67/258 (25%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      +  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------EYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDKLWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E        EK    
Sbjct: 490 QMPEKFDLNYIDEKNEKR 507


>gi|254453587|ref|ZP_05067024.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198267993|gb|EDY92263.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 428

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/459 (9%), Positives = 122/459 (26%), Gaps = 61/459 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  RI   +    E  G   I+ P ++ +D L +     +  
Sbjct: 6   MIKQSSAGIYSWLPLGFKVLKRIEQIVHEEQERAGHIAIQMPTIQSAD-LWRESGRYEAY 64

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D +G  +       +L   + R    ++ ++      Y+I   FR+E+    
Sbjct: 65  GDEMLRIKDRNGNDLLFTPTAEELVTDIFRSHVASYKSLPM--TLYQIQWKFRDERRPRF 122

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y   +     +      + 
Sbjct: 123 GVMRGREFYM----------------------------KDGYTFDLTKEDAMHAYNRHLV 154

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A+    ++     F
Sbjct: 155 SYLRTYERMGLQAI------------PMRAASGPIGGDDTHEFLVLADTGESEV-----F 197

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
               + +      E+        +  + +   +    ++    +     +          
Sbjct: 198 YDAAVTELSFGNREI--DYDDVAQCADVMEEFTTKYARTDETHDPALFDAIPADRQRTAR 255

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F                     DG  +     +       +  + +  +  
Sbjct: 256 GIEVGQIFYFGTKYSDAMGATVQGP------DGKPTAVHMGSHGIGVSRLLGAIIEASHD 309

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                         V I  +   D+D+ +  Q     +   G+ A ++    +  G++  
Sbjct: 310 DKGIIWPEGVTPFHVGIVNLKQGDADADAACQSLYDAVAALGLEA-LYDDRDERAGSKFG 368

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             D    P  I  G      G++++     G+      +
Sbjct: 369 TMDMIGLPWRITVGPRGLKNGVVELTSRKTGESEEMPPE 407


>gi|254392125|ref|ZP_05007314.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294815425|ref|ZP_06774068.1| Prolyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
 gi|326443777|ref|ZP_08218511.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197705801|gb|EDY51613.1| prolyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294328024|gb|EFG09667.1| Prolyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
          Length = 566

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 31/107 (28%), Gaps = 2/107 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      +  +         L  AG+R  +      + G +  
Sbjct: 461 DEKGLCWPAEIAPADVHVVAAGK-AVQIELALEVADQLAAAGLRVLVDERPGVSPGVKFT 519

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            A+    P  ++ G    + G++++KD   G+     +    +    
Sbjct: 520 DAELIGVPTILVAGRRS-AEGVVELKDRRTGEREELPVAEAVARLRG 565



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 20/71 (28%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                 ++   +   +R   +  G   +  P L   E  +         D     +F L+
Sbjct: 47  WLPLGKKVLENVTRVVREEMDAIGAQEVLLPALLPKEPYEI----TGRWDEYGAELFRLK 102

Query: 75  DDDGQWISLRY 85
           D  G    L  
Sbjct: 103 DRKGAEYLLGP 113


>gi|163750377|ref|ZP_02157617.1| prolyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161329867|gb|EDQ00853.1| prolyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 569

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 33/109 (30%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       ++ 
Sbjct: 31  MVRRNASGLYSWLPTGLRVLRKVEAIVREEMNKAGAIEILMPMVQPAD-LWIETGRWEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +   +D   +   L     ++   + R    ++  +       +  
Sbjct: 90  GPELLRFKDRHNRDFVLGPTHEEVITDIIRKEINSYKQLPLTLYQIQTK 138



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 31/109 (28%), Gaps = 3/109 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K   +   Q L  AGI   +F    +  G  
Sbjct: 460 DDRGIIWPAAIAPFKVGILPMNMHKSHRVKDMAEKLYQDLNDAGIEV-LFDDRKERPGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               +    P  ++ G      G+ + K+   G++          + ++
Sbjct: 519 FADMELVGLPHVVVIGDRNIDNGVFEYKNRRTGEKRDIPFDQLLDFLKS 567


>gi|114776996|ref|ZP_01452016.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114552517|gb|EAU54977.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 634

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++ + IR +  + G+  I+TP +       K     D+  + +F+ 
Sbjct: 260 GMIFWHPKGWSVWQQVENEIRGVMRDNGYQEIKTPQMVDRKLWEKS-GHWDKFREEMFTT 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
             ++ +  +++        +   +N  +    P R    G   RNE  G   
Sbjct: 319 STEN-RDYAIKPMNCPCHIQVFNQNLHSYRDLPLRLAEFGSCHRNEPSGTLH 369



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 49/341 (14%), Positives = 96/341 (28%), Gaps = 5/341 (1%)

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
               NE  G  R   + +     +        +       + +     +  DY I   N 
Sbjct: 273 QQVENEIRGVMRDNGYQEIKTPQMVDRKLWEKSGHWDKFREEMFTTSTENRDYAIKPMNC 332

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
                +  +      D                   L G+ + L     D++  F   A +
Sbjct: 333 PCHIQVFNQNLHSYRDLPLRLAEFGSCHRNEPSGTLHGL-MRLRNFVQDDAHIFCTEAQI 391

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             E  + +     +       ++   +        G +E    +E       +S  I+  
Sbjct: 392 QDEVCNFIDLTYDVYKRFGFDDVIIFLSDRPEKRVGTDEQWDKAEAALHQALDSKGIEYG 451

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG--GGRYDGLVSRFKGQNVPATG 350
                G  Y     +        + +     V  S+ G     Y    S  +   +    
Sbjct: 452 LNPGEGAFYGPKIEFSLKDCLGRVWQCGTIQVDFSMPGKLDAEYVAEDSSRQTPVMLHRA 511

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
               + R I  L            + PV +   +            T+ +  AG RAEM 
Sbjct: 512 ILGSMERFIGILIEHYEGKFPFW-LAPVQVVACNITDAQADYVAEVTKSMHKAGFRAEMD 570

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
           L  ++  G +++       P  ++ G  ER  G + ++DL+
Sbjct: 571 L-RNEKVGYKVRAHTLARVPYILVAGDREREDGTISVRDLS 610


>gi|322796311|gb|EFZ18882.1| hypothetical protein SINV_16250 [Solenopsis invicta]
          Length = 807

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 22/130 (16%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     +++       D         Q L  AG+  E+   SS     +++ A 
Sbjct: 695 GKWPYWLSPRQAMVVPVASQFDD---YAYEVKQKLWDAGVMVEVDTDSSDTLNKKIRNAQ 751

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                  ++ G  ER+ G + ++                           I + EL+  +
Sbjct: 752 LAQFNFILVVGEKERNAGTVNVR------------------TRDNTVHGEIAVDELIVKL 793

Query: 486 KKILQENKEE 495
           K +L+E +++
Sbjct: 794 K-VLKETRDQ 802



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N +++ IR+ Y   GF  + TP + Y+  L +         + +FS  D +
Sbjct: 431 FQPRGAYIYNTLMEFIRSEYRKRGFQEVITPNI-YNSKLWQTSGHWQHYAENMFSF-DVE 488

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 489 KETFALKPMNCPG 501


>gi|118477787|ref|YP_894938.1| threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|229184596|ref|ZP_04311798.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|118417012|gb|ABK85431.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Bacillus
           thuringiensis str. Al Hakam]
 gi|228598913|gb|EEK56531.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 639

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+
Sbjct: 575 DMRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSGVIE 623



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/257 (10%), Positives = 67/257 (26%), Gaps = 15/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      +  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------EYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDKLWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFN 270
           ++ E        EK   
Sbjct: 490 QMPEKFDLNYIDEKNEK 506


>gi|125973743|ref|YP_001037653.1| threonyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256005747|ref|ZP_05430701.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417900|ref|ZP_06248920.1| threonyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166223337|sp|A3DET1|SYT_CLOTH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125713968|gb|ABN52460.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Clostridium
           thermocellum ATCC 27405]
 gi|255990281|gb|EEU00409.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409302|gb|EFB39560.1| threonyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940063|gb|ADU74097.1| threonyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 635

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R  +   G+  I+TP++   +   +     D   + ++  
Sbjct: 261 GFPFFMPKGMVLRNVLEEYWREEHRKAGYQEIKTPIILNEELWHRS-GHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 319 TKIDEADFAIKPMNCPG 335



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 67/232 (28%), Gaps = 10/232 (4%)

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           I ++  F  +   K   EL    + ++  ++ +       +   +      +I       
Sbjct: 400 ISLIDDFYKVFGFKYHVELSTRPENSMGSDEDWERATNALKNALEKKGIDYKINEGDGAF 459

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---GFSI 353
            G +          L   +    Q   +        R+D       G+            
Sbjct: 460 YGPKID------FHLEDSIGRTWQCGTIQLDFQMPERFDLTYIGPDGEKHRPVMIHRVVF 513

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G     +A+ +   +      + PV +  +              + L   G+R E  L  
Sbjct: 514 GSIERFIAILTEHYAGAFPVWLSPVQVKILPILEKQHDYVAEVKKALEEKGVRVEADL-R 572

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           ++  G +++ A     P  ++ G  E     + ++    G      +++  +
Sbjct: 573 NEKIGYKIREAQLEKVPYMLVIGDKEMENRTVAVRSRKDGDLGPMRLEDFVN 624


>gi|322517198|ref|ZP_08070081.1| threonine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124257|gb|EFX95773.1| threonine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 648

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L                +      +   +  
Sbjct: 502 HYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RAE+     +N   Q K  A + +  P  +I G  E   G + ++  
Sbjct: 562 AWEVAKELRDRGVRAEVD---ERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVAQITIPISE 480
            + +  +  +        A +A+ + P +E
Sbjct: 619 GQKQTHTETVSEFVENILADIARKSRPDAE 648



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 64/259 (24%), Gaps = 10/259 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR             + +       +YR  P+   E     R+ +     
Sbjct: 321 MDMGDGEEFVLRPMNCP-------HHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                    + +     +  + +E    K     I +     L     ++        ++
Sbjct: 374 -GLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDFNLTDYRFRLSYRDPADKHK 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   +   +     V  +  E           G  L  +    +    ++   +  
Sbjct: 433 YFDNDEMWENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLD 492

Query: 253 HELYELVKGTIAGEKGFNE 271
             L E       G  G   
Sbjct: 493 FLLPERFDLHYIGADGEEH 511


>gi|332670551|ref|YP_004453559.1| threonyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339589|gb|AEE46172.1| threonyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 670

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     LR  GIRAE+     + FG +++ A  +  P  +
Sbjct: 568 WLAPVQVLAVPVAEPFEPYLEDVVAQLRAEGIRAEIDRSDDR-FGKKIRNASTQKIPFVL 626

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +   G +  +    G++ +                  +P++E V  +   ++E  
Sbjct: 627 IVGGEDADAGAVSFRY-RDGRQDNG-----------------VPVAEAVQRIVTAVRERA 668

Query: 494 E 494
           +
Sbjct: 669 Q 669


>gi|312863291|ref|ZP_07723529.1| threonine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100827|gb|EFQ59032.1| threonine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 648

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L                +      +   +  
Sbjct: 502 HYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RAE+     +N   Q K  A + +  P  +I G  E   G + ++  
Sbjct: 562 AWEVAKELRDRGVRAEVD---ERNEKMQFKIRASQTQKIPYQLIVGDKEMEDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVAQITIPISE 480
            + +  +  +        A +A+ + P +E
Sbjct: 619 GQKQTHTETVSEFVENILADIARKSRPDAE 648



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 64/259 (24%), Gaps = 10/259 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR             + +       +YR  P+   E     R+ +     
Sbjct: 321 MDMGDGEEFVLRPMNCP-------HHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                    + +     +  + +E    K     I +     L     ++        ++
Sbjct: 374 -GLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDFNLTDYRFRLSYRDPADKHK 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   +   +     V  +  E           G  L  +    +    ++   +  
Sbjct: 433 YFDNDEMWENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLD 492

Query: 253 HELYELVKGTIAGEKGFNE 271
             L E       G  G   
Sbjct: 493 FLLPERFDLHYIGADGEEH 511


>gi|283779278|ref|YP_003370033.1| threonyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283437731|gb|ADB16173.1| threonyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 666

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 3/139 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +           + V ++    +           + T+   S++  +     
Sbjct: 512 NKIHRPVMIHRAPLGSMERFIGVLIEHFAGAFPLWLAPEQARVVTVSEKSEAYGR--EVE 569

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + LR+AG R      S K  G +++ A     P   + G  +  +G + ++D   G   +
Sbjct: 570 EKLRSAGFRVSGDYRSEK-LGAKIRDAQLELIPYMFVVGPRDAEQGTVSLRDRLDGDLGA 628

Query: 458 REIKNNESWREARVAQITI 476
             + +        VA+  +
Sbjct: 629 LSLADAMQRLSDEVAERKV 647



 Score = 41.0 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 20/73 (27%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF-SLQDD 76
              K   IR  +   +R      G+  + TP +   D   +           +F      
Sbjct: 269 WLPKGATIRGLLESFVREELIRRGYQTVYTPHIGKVDLY-RTSGHFPYYADSMFPPFVTK 327

Query: 77  DGQWISLRYDLTA 89
           + +   L+     
Sbjct: 328 EEEEYLLKPMNCP 340


>gi|315930217|gb|EFV09332.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 602

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 43/95 (45%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      +   +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 VGIVPIGEAHIDYAKEIQKELLELNIDSEVY-EKNESLSKKIRIAEKQKLPMILVLGDDE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 566 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600


>gi|308067332|ref|YP_003868937.1| Threonyl-tRNA synthetase 2 (threonine--tRNA ligase) (ThrRS)
           [Paenibacillus polymyxa E681]
 gi|305856611|gb|ADM68399.1| Threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) (ThrRS)
           [Paenibacillus polymyxa E681]
          Length = 637

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 44/135 (32%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +R  + D  R+I   +G++ + TPL+   + L +     +   + ++  
Sbjct: 264 GMPFYLPKGMVVRTALEDYSRDIQRLHGYEEVRTPLMMN-NRLWEQSGHYEHYKENMY-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +L+             +         +YR  P+   E     R       + 
Sbjct: 322 SEVDETTFALKPMNCPG-------HMLVFKNELHSYRDLPIRIAEFGQVHRHELSGALNG 374

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 375 MMRVRTFCQDDAHIF 389



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    + +         L  AG+R E+    ++  G +++ A     P   
Sbjct: 537 WLAPVHAKLLPVSENYIETANEIQDALLKAGLRVEVD-TRNEKLGYKIREAQLEKVPYMF 595

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G  E++ G + ++   +G   S  I +        + + 
Sbjct: 596 VIGENEKTTGTVAVRKRGEGDLGSLSIADIVEKISTEIREK 636


>gi|282850156|ref|ZP_06259535.1| proline--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579649|gb|EFB85053.1| proline--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 572

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 42/166 (25%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G         R   +I   +R   +      I  P+L+ ++   K  
Sbjct: 26  MLRAGFMR-KTANGLYSFLPLGWRSIKKIEAIVREEMDRASAQEIMMPILQPAEI-WKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGP 113
              +     +  + D       L     ++   L +    ++  +          +R   
Sbjct: 84  GRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDER 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F        D   +  + +   M           G
Sbjct: 144 RPRYGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDAYTRIFTRCG 189



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 1/99 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     V++     D   +S  Q     L+ AG+   +     +  G + K AD 
Sbjct: 466 IWPRSIAPFEAVIVPINAKDEALMSTSQTIYTALQNAGVDVLLDDRKDRA-GVKFKDADL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              PL I           ++I+    G+ L   I +   
Sbjct: 525 IGYPLRITVSKNTLENNEVEIQIRKSGEALPCAIDSVAD 563


>gi|126654116|ref|ZP_01725934.1| prolyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589396|gb|EAZ83546.1| prolyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 568

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 61/553 (11%), Positives = 136/553 (24%), Gaps = 94/553 (16%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+ ++I   IR   E      +  P L+ ++ L +     ++    +  
Sbjct: 37  SGVYSYLPLAKRVLSKIETIIREEMEAINSIELLMPSLQSAE-LWQESGRWEKYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRF 125
           L+D   +  +L     ++   L R   +++  +          +R     R        F
Sbjct: 96  LKDRHDRDFALGPTHEEVITTLVRDEIKSYKKLPLTLYQIQTKFRDEKRPRFGLLRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG--------INNRKILDG 177
                        S +    +M    ++    +G+                 +   +L  
Sbjct: 156 IMKDAYSFHASRESLDETYDDMYRAYSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSE 215

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I E    + D       I +  +    +   + +K +      D        A L  +  
Sbjct: 216 IGEDTIAYSDTSDYAANIEMAEVIADYQTSDEALKEVEKVATPDQKTIEEVSAFLQVKPA 275

Query: 238 DIMVSFLSIDLEKSM------HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           +++ S +     + +            +K   A E G  EL   + +    G     I  
Sbjct: 276 NVIKSLVFDVDGELVVVLARGDHEINDIKLKNALEAGSVELASEAAIRELLGCGVGSIGP 335

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKP---VVFGSVGGGGRYDGLVSRFKGQNVP- 347
               V         +     G    NE       V          Y  +    +G   P 
Sbjct: 336 VKLPVDVKVVADHAIKSIRNGIAGANEDGFHLVNVNPERDFAVNDYLDIRFIQEGDPSPD 395

Query: 348 -----------------ATGFSIGISRLIVALKSLES----------------------- 367
                              G +         L                            
Sbjct: 396 GQGTIKFAEGIEVGHIFKLGTTYSAKMNGTFLDEQGKSQPFIMGCYGIGVSRILAAVAEH 455

Query: 368 --------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                       +      ++     D   ++       +L++      +   + +  G 
Sbjct: 456 FQDENGFTWPTQLAPYDIHVVPVNTKDEAQVALADELYGLLKSYRYDVLLDDRAERA-GV 514

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +   AD    P+ +  G      G++++K    G+           W             
Sbjct: 515 KFADADLIGLPVRVTVGKKAIE-GIVEVKFRQTGE--------TFEW----------KKE 555

Query: 480 ELVSTVKKILQEN 492
           E++  + +  ++N
Sbjct: 556 EVIDHLNEFFRKN 568


>gi|134046250|ref|YP_001097735.1| threonyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|166223355|sp|A4FZ87|SYT_METM5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|132663875|gb|ABO35521.1| threonyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 622

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 49/392 (12%), Positives = 101/392 (25%), Gaps = 37/392 (9%)

Query: 95  VAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADT 154
           V EN    V     Y +      E       RQ+     +        A     MM  D 
Sbjct: 242 VVENGGMPVETPVMYDLQNNAIREHADKFGERQYRFKQGNKDLMLRFAACFGQFMMKKDM 301

Query: 155 LEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL 214
                      +         +   E +GL          +    ID          +L 
Sbjct: 302 YLLPKHMPLKLYELSTYSFRYEQRGELVGLKRLRAFTMPDMHTVCIDMKQAMEAFEDQLW 361

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
           +G    D+                 ++   + D  +   E +  +      + G + ++ 
Sbjct: 362 MGLKTGDDFKTPY-----------AIIFRFTEDFFEENKEWFFGMAKEYKQKYGKDAILE 410

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
           I    +        + +  +  R +E  T     E+   F ++       V   +     
Sbjct: 411 ILPGRKHYWVGKVDMAVVDSFGRPIENPTVQIDVESAERFGIVVHDGDKKVQPIIL---- 466

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                      +V      +  +  +  L+           + P+    +          
Sbjct: 467 -----HCSPTGSVERVLCGLLENAYLNTLE--NKPPALPTWLTPIQARVIPVGDKHAEFA 519

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 LR +GIRA+       + G +++ A        ++ G  E     L +      
Sbjct: 520 LEVATKLRASGIRADFDDRED-SMGKKVRNAGTDWVNYVVVIGDSEMESSKLTV---TVR 575

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTV 485
           +E   +    ES          + + EL+  +
Sbjct: 576 EESELKKAKKES----------LTVEELIEKI 597


>gi|315639344|ref|ZP_07894506.1| threonine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315480670|gb|EFU71312.1| threonine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 602

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 45/98 (45%), Gaps = 1/98 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +      L+  +   + L   G+ +E++   +++   +++ A+++  P+ ++ G
Sbjct: 504 PTQVGIVPISEVHLAYAKGIQRTLLEMGVDSEIY-DKNESLSKKIRNAEKQKLPMILVIG 562

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             E S   + ++D    ++ S  +    +  + ++ ++
Sbjct: 563 DEELSNRAVALRDRRAKEQKSLSLDEFMNLIKEKINEV 600


>gi|313893443|ref|ZP_07827015.1| proline--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442084|gb|EFR60504.1| proline--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 572

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 62/247 (25%), Gaps = 10/247 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G         R   +I   +R   +      I  P+L+ ++   K  
Sbjct: 26  MLRAGFMR-KTANGLYSFLPLGWRSIKKIEAIVREEMDRASAQEIMMPILQPAEI-WKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGP 113
              +     +  + D       L     ++   L +    ++  +          +R   
Sbjct: 84  GRWNAYGAEMMRINDRHDNEFCLGPTHEEIITTLVKNEINSYRQLPVNLYQIQSKFRDER 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
             R        F        D   +  E +   M           G+             
Sbjct: 144 RPRYGLMRSREFIMKDAYSFDVDEAGLEESYKSMYDAYTRIFNRCGLTFRPVEADSGAIG 203

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
              G  E + +    + +             + G  G+     E   D S   T  A+  
Sbjct: 204 G-SGTHEFMAIAEAGEADIVYCTKCDYAANIEIGKPGIMKQAEEALQDLSVVDTPNASSI 262

Query: 234 SEQIDIM 240
               D++
Sbjct: 263 EAVADML 269



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 1/99 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     V++     D   +S  +     L+ AG+   +     +  G + K AD 
Sbjct: 466 IWPRSIAPFEAVIVPINAKDEALMSTSETIYSALQEAGVDVLLDDRKDRA-GVKFKDADL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              PL I           ++I+    G+ LS  I +  +
Sbjct: 525 IGYPLRITVSKNTLENNEVEIQIRKTGEALSCAIDSVAT 563


>gi|152984493|ref|YP_001349901.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166980141|sp|A6VA16|SYP_PSEA7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150959651|gb|ABR81676.1| prolyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 571

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRRLASGLYTWLPMGLRVLRKVETVVREEMNAAGALEVLMPAVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L+D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRLKDRHEREFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTK 138


>gi|50306435|ref|XP_453191.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642325|emb|CAH00287.1| KLLA0D02772p [Kluyveromyces lactis]
          Length = 461

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 47/462 (10%), Positives = 107/462 (23%), Gaps = 88/462 (19%)

Query: 18  CPTKEIRIRNRILDSIR-NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD 76
                 +I N+++  ++      YGF  + TPL+ Y  +L +                  
Sbjct: 64  FLPNGTKIFNKLVSFMKLQQQNKYGFQEVVTPLI-YRKTLWE-----------------Q 105

Query: 77  DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
            G W                EN+   +F                        +  +   +
Sbjct: 106 SGHW----------------ENYKDDMFRVE------------------GNDVSKEEYGL 131

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
                     +      +   + ++ +D+     +R    G L  +           +  
Sbjct: 132 KPMNCPGHCVVFKRFDRSYNELPLRFSDFSP--LHRNEASGALSGLTR---------VRK 180

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELY 256
               D         V+  + +        +TK   ++ +      S       +      
Sbjct: 181 FHQDDGHIFCTPDQVRQEIQKCLELVDMCYTKVFPISGDSKQAAYSLTLSTRPEKYVGDI 240

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVM 316
           E+        K  + L    +    +  +         I+             I     +
Sbjct: 241 EVWDHAEDVLK--DTLQSWGQPWTTNEGDGAFYGPKIDILVNDHTGKSHQVATIQLDFQL 298

Query: 317 NEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG 376
            E               Y   +   +        F       I+   S       +    
Sbjct: 299 PE---RFDLQFKDKDNSYKRPIMIHRAVFGSVERFMA-----ILIDSSKGKWPFWLNPNQ 350

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAG-------------IRAEMFLGSSKNFGNQLKY 423
            ++I     D   +         LR                   +M     ++   +++ 
Sbjct: 351 CMVIPVKTEDEKIMELAFKTVNSLRGENSDPKSPIPLNSFHFSVDMD-ARDESVSKRIRE 409

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A +++    I+ G  E   G + I+     K     I +   
Sbjct: 410 AIKKHYSYIIMIGDKEVEAGKVAIRTRESKKVDLLTIDDVFE 451


>gi|196247600|ref|ZP_03146302.1| Proline--tRNA ligase [Geobacillus sp. G11MC16]
 gi|196212384|gb|EDY07141.1| Proline--tRNA ligase [Geobacillus sp. G11MC16]
          Length = 271

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 41/157 (26%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++   IR      G   +  P L+ ++ L +           
Sbjct: 34  QSASGVYTFLPLGQRVLQKVEAIIREEMNRAGALELLMPALQPAE-LWQQSGRWYSYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  L+D   +   L     ++   + R   + +  +          +R     R      
Sbjct: 93  LMRLKDRHERDFVLGPTHEEMITTIVRDEVKTYKRLPLILYQIQTKFRDEKRPRFGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F             S +    +M    A+     G
Sbjct: 153 REFIMKDAYSFHTSQESLDETYNKMYEAYANIFRRCG 189


>gi|253998429|ref|YP_003050492.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|313200504|ref|YP_004039162.1| threonyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|253985108|gb|ACT49965.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|312439820|gb|ADQ83926.1| threonyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 640

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/167 (8%), Positives = 45/167 (26%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +   +   +R ++  YG+  ++TP +       K        
Sbjct: 260 MQDEAP-GMVFWHPRGWNLWQEVEQYMRGLFRQYGYQEVKTPTIMDRSLWEKS-GHWQNY 317

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +  +++        +       +                 +       
Sbjct: 318 RENMFT-TSSENRDYAVKPMNCPGHIQIFNSGLHSYRDLPLRLAEFGSCHRNEPSGALHG 376

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +AD +  +     D+       K
Sbjct: 377 LMRVRGFTQDDAHIFCTEDQVKQEVADFIVMLYQAYKDFGFNDVLVK 423



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 41/346 (11%), Positives = 85/346 (24%), Gaps = 15/346 (4%)

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
              +    R      G         +D                M  T             
Sbjct: 278 WQEVEQYMRGLFRQYGYQEVKTPTIMDRSLWEKSGHWQNYRENMFTTSSENRDYAVKPMN 337

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              + +I +  L         +L E     R        GL  V+        D++  F 
Sbjct: 338 CPGHIQIFNSGLHSY-RDLPLRLAEFGSCHRNEPSGALHGLMRVRG----FTQDDAHIFC 392

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
               +  E  D +V       +   +++   +        G +E    +E    +    N
Sbjct: 393 TEDQVKQEVADFIVMLYQAYKDFGFNDVLVKLSTRPEKRVGSDETWDKAEASLAAALREN 452

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFK 342
            +        G  Y     +        +    +              G  Y    +  K
Sbjct: 453 NLAFDLQPGEGAFYGPKIEF---TLKDSLGRLWQCGTIQLDFNLPERLGAEYVAEDNTRK 509

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +        + R +  L    +       + PV    ++      +  Q     LR 
Sbjct: 510 HPVMLHRAIVGSMERFLGILIENYAGAMP-TWLAPVQAMVLNITDSQSAYVQEVVAELRK 568

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            G R +  L  ++    +++    +  P  ++ G  E   G + ++
Sbjct: 569 NGFRVDSDL-RNEKITYKIREHSLQKLPYLLVAGDREMQSGQVAVR 613


>gi|99081693|ref|YP_613847.1| prolyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|122984229|sp|Q1GFI1|SYP_SILST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|99037973|gb|ABF64585.1| prolyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 451

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 48/477 (10%), Positives = 121/477 (25%), Gaps = 63/477 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  +I   +       G  P+  P ++ +D L +     D  
Sbjct: 31  MIKQSAAGIYSWLPLGYRVLKKIEGIVHEEQMRAGHIPMLMPTIQSAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  ++D   + +       +L   + R    ++  +      Y+I   FR+E     
Sbjct: 90  GEEMLRIRDRHDRDMLFTPTAEELITDIFRANVSSYKDLP--LTMYQIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFYM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D + +F   A     ++     F
Sbjct: 180 TYLRTYERMGLQAI------------PMRADGGPIGGDYTHEFLVLAETGESEV-----F 222

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              ++        E+       E+    L   +    ++    +    ++          
Sbjct: 223 YDSEITDLTFGAREI--DYDNVEQCQAVLEEFTSRYARTDETHDEALFNAVPEERRRVAR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F     +       +       DG        +       +  + +  +  
Sbjct: 281 GIEVGQIFYFGTKYSEALGATVQTA------DGQSVPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFGNQL 421
                           I  +   D ++ +  +     L   G+  E ++    +  G + 
Sbjct: 335 DKGIIWPEGVTPFHCGIVNLKQGDDEADAACEQLYAALTAIGL--EPLYDDRKERAGGKF 392

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
              D    P  I  G      G++++     G+      ++      A  A    P 
Sbjct: 393 ASMDLIGLPWRITVGPRGLKNGVVEVTSRRTGESEEMSPEDAVKKIAAIYANHPTPR 449


>gi|19703946|ref|NP_603508.1| threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|22654111|sp|Q8RFS6|SYT_FUSNN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19714122|gb|AAL94807.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 620

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  +  + + +   +     L   GIRAE+    ++  G +++ A+ +   P
Sbjct: 515 PMWLAPVQVKVLTLNDECIPYAKEIMNKLEELGIRAELD-DRNETIGYKIREANGKYKIP 573

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           + +I G  E     + I+      + S+ +    ++    V + TI   
Sbjct: 574 MQLIIGKNEVENKEVNIRRFGSKDQFSKLLDEFYTYV---VDEATIKFD 619



 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + +RN ++D  R  +E  G+  +ETP++   + L +         + +++
Sbjct: 243 GFPFFLPKGMIVRNVLIDLWRREHEKAGYQQLETPIMLNKE-LWEISGHWFNYRENMYT 300


>gi|297191728|ref|ZP_06909126.1| prolyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151037|gb|EDY65325.2| prolyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 691

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 33/107 (30%), Gaps = 2/107 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      +          + L  AG+R  +   +  + G +  
Sbjct: 587 DEQGLCWPREIAPADVHVVAAGK-ALQTELALDVAEQLGAAGLRVLVDDRAGVSPGVKFT 645

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            A+    P  ++ G    + G+L++KD   G+     + +  +    
Sbjct: 646 DAELIGVPKILVAGRRS-AEGVLELKDRRTGEREELTVADAVARLRG 691



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+   +   +R   +  G   +  P L   +         +     +F L+D  
Sbjct: 173 WLPLGKRVLENVTRVVREEMDAIGAQEVLLPALLPKEPYEA-TGRWEEYGAELFRLKDRK 231

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 232 GADYLLGP 239


>gi|261349933|ref|ZP_05975350.1| threonine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860716|gb|EFC93014.1| threonine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 608

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 91/343 (26%), Gaps = 16/343 (4%)

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                            + +  A    A  +  + +    N    L  +           
Sbjct: 262 HAAKFGERQYRTDTKKNLMLRFACCFGAFRVMADPFITWKNLPAKLYELSTYSFRFEKKG 321

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               L  LRA    D            E  +    D      +  +    ++        
Sbjct: 322 EVVGLKRLRAFTMPDFHSFCADMNSTLEEFS-KQTDMCIQTGVDLDVNYEII----FRAT 376

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K  ++  +    +I  + G   L+ I    +              + R +E  T      
Sbjct: 377 KDFYDENKEWMYSIGKKIGKPVLLEILPERKHYWSCKIDFAAIDYLGRPIENPT------ 430

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +   V + K+  + +    G   Y  ++      ++     S+       A++  E + 
Sbjct: 431 -VQIDVESGKRFDITYLGEDGKEHYPTILHCSPTGSIERVICSLLEKT---AIELDEKAP 486

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + P+ +  +    D           +    IR ++     ++ G +++ A     
Sbjct: 487 MLPTWLSPIEVRIITVGEDHKDFANELYDKINAENIRVDVD-DRDESVGKKIRNAATEWI 545

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P   + G  E+  G+  +     G+++   +         +  
Sbjct: 546 PYIFVVGDNEKESGVFSVTVRETGEKVDMTVDELIKEVLDKTK 588


>gi|283955362|ref|ZP_06372861.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793122|gb|EFC31892.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 602

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 9/95 (9%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 IGIVPIGEAHIAYAKEIQKELLKFNIDSEVY-EKNESLSKKIRIAEKQKLPMILVLGDDE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 566 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600


>gi|302924192|ref|XP_003053833.1| hypothetical protein NECHADRAFT_31483 [Nectria haematococca mpVI
           77-13-4]
 gi|256734774|gb|EEU48120.1| hypothetical protein NECHADRAFT_31483 [Nectria haematococca mpVI
           77-13-4]
          Length = 485

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 51/445 (11%), Positives = 112/445 (25%), Gaps = 53/445 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI NR++D +R  Y  YGF+ + TP + Y  SL       +     ++  
Sbjct: 61  GSPIFLPNGARIFNRLVDFLRKQYVRYGFEEVITPTI-YKKSLWAKSGHLENYADDMY-- 117

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                                 G    N K              
Sbjct: 118 ---------------------AVRGNTEQPPAEHDGCCGSHPENLKPEDEEEGD------ 150

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  D+     +R  + G L  +        ++ 
Sbjct: 151 YGLKPMNCPGHCLIFASKRHSYRDLPIRYADFSP--LHRNEISGALSGLTRVRRFHQDDG 208

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            I  R          + +K  L +           GA+     +        I  E+   
Sbjct: 209 HIFCRPCQV-----EEEIKKTL-DFVKVVYTVLRFGASYRL-ALSTRPKDHYIGTEEEWA 261

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +    +K   A +    E  V        G   + +   S             ++    F
Sbjct: 262 QAENALKR--ALDASGMEWGVKEGDGAFYGPKIDIVLTDSDGKEHQTATIQLDFQLPKRF 319

Query: 314 PVMNEKQKP--VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            +  +   P     G               +   +           + + ++  +     
Sbjct: 320 ELEYQAPAPEYEARGETTEDPALLAEYGPVRPVMIHRAVLGSVERLMALLIEKYDGKWPF 379

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQML---------RTAGIRAEMFLGSSKNFGNQLK 422
                  +I T++  +  L   +    +L         R  G+  ++   +++  G ++K
Sbjct: 380 WLNPRQAIILTVNTSTPVLDWAEHVRDVLVGHNKQNVFRPTGLAVDVD-TTARPLGAKIK 438

Query: 423 YADRRNCPLAIIQGTGERSRGMLQI 447
            A        ++ G  +     + +
Sbjct: 439 EARTNGYGQILVVGDEDVKNKQVAL 463


>gi|222445506|ref|ZP_03608021.1| hypothetical protein METSMIALI_01146 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435071|gb|EEE42236.1| hypothetical protein METSMIALI_01146 [Methanobrevibacter smithii
           DSM 2375]
          Length = 608

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 91/343 (26%), Gaps = 16/343 (4%)

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                            + +  A    A  +  + +    N    L  +           
Sbjct: 262 HAAKFGERQYRTDTKKNLMLRFACCFGAFRVMADPFITWKNLPAKLYELSTYSFRFEKKG 321

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               L  LRA    D            E  +    D      +  +    ++        
Sbjct: 322 EVVGLKRLRAFTMPDFHSFCADMNSTLEEFS-KQTDMCIQTGVDLDVNYEII----FRAT 376

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K  ++  +    +I  + G   L+ I    +              + R +E  T      
Sbjct: 377 KDFYDENKEWMYSIGKKIGKPVLLEILPERKHYWSCKIDFAAIDYLGRPIENPT------ 430

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +   V + K+  + +    G   Y  ++      ++     S+       A++  E + 
Sbjct: 431 -VQIDVESGKRFDITYLGEDGKEHYPTILHCSPTGSIERVICSLLEKT---AIELDEKAP 486

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + P+ +  +    D           +    IR ++     ++ G +++ A     
Sbjct: 487 MLPTWLSPIEVRIITVGEDHKDFANELYDKINAENIRVDVD-DRDESVGKKIRNAATEWI 545

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P   + G  E+  G+  +     G+++   +         +  
Sbjct: 546 PYIFVVGDNEKESGVFSVTVRETGEKVDMTVDELIKEVLDKTK 588


>gi|62185526|ref|YP_220311.1| threonyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|73919780|sp|Q5L4T1|SYT_CHLAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|62148593|emb|CAH64365.1| threonyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 635

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/143 (9%), Positives = 42/143 (29%), Gaps = 2/143 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + I + ++   + +++  G+  I+TP L  S SL +         + +++L
Sbjct: 256 GMPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQL-MSRSLWEVSGHWSNYRENMYTL 314

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +D +  +++         Y      +                 +              
Sbjct: 315 KIED-EDYAIKPMNCPGCMLYYKTRLHSYKQFPLRIAEIGHVHRYEVSGALSGLMRVRAF 373

Query: 134 DNVGSSAETADAEMCMMMADTLE 156
               +       ++     + L 
Sbjct: 374 HQDDAHVFLTPEQVEEETLNILH 396



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/234 (9%), Positives = 60/234 (25%), Gaps = 6/234 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     +  E ++I+     +     +    EL         G +EL  ++ 
Sbjct: 373 FHQDDAHVFLTPEQVEEETLNILHLVSELYSTFGLEYHLELSTRPEKATIGSDELWELAT 432

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRY 334
              +    ++          G  Y                +       +           
Sbjct: 433 AALERALVNSHTPFIINPGDGAFYGPKIDIHVKDAIQRTWQCGTIQLDMFLPERFELEYT 492

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +    +     +    F      L + ++  +           + + T+        + Q
Sbjct: 493 NAQGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHIRVITVA--DRHQPRAQ 550

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                 +  G    +   S+++   +++ A        +  G  E  +  L I+
Sbjct: 551 KLATAWQKLGFVVTVD-DSNESVSKKIRNAQNMQVNYMVTLGDREIEQNTLAIR 603


>gi|226324523|ref|ZP_03800041.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758]
 gi|225206971|gb|EEG89325.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758]
          Length = 643

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 45/110 (40%), Gaps = 4/110 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      +   Q     L  +G+RAE+    ++  G +++ A  +  P  +
Sbjct: 533 WLAPVQVKVLPISDKYMDYAQKVLDELNNSGVRAEID-TRAEKIGYKIREAQMKKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT---IPISE 480
           + G  E   G++ I+   +G E  + + +  +  +  +   T   +   +
Sbjct: 592 VVGAKEEEDGLVSIRSRFEGDEGQKSLTDFLAAIKMEIQAKTAREVKKED 641



 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N++LD  R I++  G+  I TP++  S  L +     D     +++ 
Sbjct: 260 GFPFFLPKGMELKNQLLDYWREIHKKAGYVEISTPIM-LSRHLWETSGHWDHYKDNMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 VI-DDEDFAIKPMNCPG 334


>gi|55820651|ref|YP_139093.1| threonyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822542|ref|YP_140983.1| threonyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116627458|ref|YP_820077.1| threonyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|73919831|sp|Q5M0T3|SYT_STRT1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919832|sp|Q5M5B9|SYT_STRT2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122267944|sp|Q03LP1|SYT_STRTD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|55736636|gb|AAV60278.1| threonyl-tRNA synthetase 1 [Streptococcus thermophilus LMG 18311]
 gi|55738527|gb|AAV62168.1| threonyl-tRNA synthetase 1 [Streptococcus thermophilus CNRZ1066]
 gi|116100735|gb|ABJ65881.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Streptococcus
           thermophilus LMD-9]
 gi|312277977|gb|ADQ62634.1| Threonyl-tRNA synthetase ThrS [Streptococcus thermophilus ND03]
          Length = 648

 Score = 60.2 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L                +      +   +  
Sbjct: 502 HYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RAE+     +N   Q K  A + +  P  +I G  E   G + ++  
Sbjct: 562 AWEVAKKLRDRGVRAEVD---ERNEKMQFKIRASQTQKIPYQLIVGDKEMKDGTVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVAQITIPISE 480
            + +  +  +        A +A+ + P +E
Sbjct: 619 GQKQTHTETVSEFVENILADIARKSRPDAE 648



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 64/259 (24%), Gaps = 10/259 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR             + +       +YR  P+   E     R+ +     
Sbjct: 321 MDMGDGEEFVLRPMNCP-------HHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                    + +     +  + +E    K     I +     L     ++        ++
Sbjct: 374 -GLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDFNLTDYRFRLSYRDPADKHK 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   +   +     V  +  E           G  L  +    +    ++   +  
Sbjct: 433 YFDNDEMWENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLD 492

Query: 253 HELYELVKGTIAGEKGFNE 271
             L E       G  G   
Sbjct: 493 FLLPERFDLHYIGADGEEH 511


>gi|315500848|ref|YP_004079735.1| prolyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315407467|gb|ADU05584.1| prolyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 589

 Score = 59.9 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 41/160 (25%), Gaps = 6/160 (3%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST-----NNI 372
           E       G          ++        P  G         VA  + +           
Sbjct: 424 EIGHIFQLGRRYTDAFAVDVLGPEGKPVRPTMGCYGIGVSRAVAAVAEQHHDDRGLVWPA 483

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 +          L         L  AG+R  +   +  + G +   A+    P A
Sbjct: 484 AVAPCDVHLIAAGKGPQLDAALDLGGRLAAAGLRVLVDDRTHVSAGVKFTDAELIGIPRA 543

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ++ G    + G ++++D A G+     ++           
Sbjct: 544 VVVGRR-LAEGYVELRDRATGERTELPVEAIVERLRDEAG 582



 Score = 37.5 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  + +RI   +R+     G   +  P L  ++   +           +F+L D  
Sbjct: 44  WLPLGKLVLDRITAIVRDEMTGIGDQEVHFPALLPAEPY-RTSGRWTEYGDDIFTLADRK 102

Query: 78  G 78
           G
Sbjct: 103 G 103


>gi|302864555|ref|YP_003833192.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302567414|gb|ADL43616.1| prolyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 589

 Score = 59.9 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 41/160 (25%), Gaps = 6/160 (3%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST-----NNI 372
           E       G          ++        P  G         VA  + +           
Sbjct: 424 EIGHIFQLGRRYTDAFAVDVLGPEGKPVRPTMGCYGIGVSRAVAAVAEQHHDDRGLVWPA 483

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 +          L         L  AG+R  +   +  + G +   A+    P A
Sbjct: 484 AVAPCDVHLIAAGKGPQLDAALDLGGRLAAAGLRVLVDDRTHVSAGVKFTDAELIGIPRA 543

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ++ G    + G ++++D A G+     ++           
Sbjct: 544 VVVGRR-LAEGYVELRDRATGERTELPVEAIVERLRDEAG 582



 Score = 37.5 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  + +RI   +R+     G   +  P L  ++   +           +F+L D  
Sbjct: 44  WLPLGKLVLDRITAIVRDEMTGIGDQEVHFPALLPAEPY-RTSGRWTEYGDDIFTLADRK 102

Query: 78  G 78
           G
Sbjct: 103 G 103


>gi|269977288|ref|ZP_06184261.1| threonyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269934591|gb|EEZ91152.1| threonyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 669

 Score = 59.9 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 43/121 (35%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  +   + LR   +R E+     + FG +++ A +   P  +
Sbjct: 567 WLAPVQVRLVPVADTFNAYCEDVAKQLRAENVRVEIDESDDR-FGKKIRNAAKDKVPFTL 625

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +   G +  +    G++ +                  + IS  +  + + ++  K
Sbjct: 626 IVGGEDAEHGAVSFRY-RGGEQKNG-----------------VKISAAIQEITETIRSRK 667

Query: 494 E 494
            
Sbjct: 668 N 668


>gi|119025818|ref|YP_909663.1| threonyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118765402|dbj|BAF39581.1| threonyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 711

 Score = 59.9 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/369 (11%), Positives = 94/369 (25%), Gaps = 31/369 (8%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G  ++ +        +    +     +       L+
Sbjct: 331 MHRKHHYSFVQTPHITKGGLYETSGHLQWYKDSMYPPMRLDEEKDENGNVIKQGFDYYLK 390

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 391 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 450

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T   G   K   L    +++        +                 ++ 
Sbjct: 451 EQMKDELKSLLTFVLG-LLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEVAKES 509

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             +LV               ++    I R  +  T    +     F +            
Sbjct: 510 GLDLVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYIAADGTHQRP 568

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 569 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 610

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +     Q +   L    +R E+ L   + FG +++ A +   P  +I G  + +   +  
Sbjct: 611 EFAPHLQKFIASLEEETVRCEIDLSDDR-FGKKIRNASKSKAPFILIVGEEDMNNNAVSF 669

Query: 448 KDLAKGKEL 456
           +    G +L
Sbjct: 670 R-FRDGSQL 677


>gi|306822719|ref|ZP_07456097.1| threonine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|304554264|gb|EFM42173.1| threonine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
          Length = 708

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 45/404 (11%), Positives = 104/404 (25%), Gaps = 48/404 (11%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +        +    +     +       L+
Sbjct: 328 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGFDYYLK 387

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 388 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 447

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T   G   K   L    +++        +                 ++ 
Sbjct: 448 EQMKDELKNLLTFVLG-LLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEVAKES 506

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +            
Sbjct: 507 GLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYIAADGTHQRP 565

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 566 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 607

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +     Q +   L    +R E+ +   + FG +++ A +   P  +I G  + +   +  
Sbjct: 608 EFAPHLQRFIASLEEETVRCEIDMSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSF 666

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +    G +L+                  +P+ E  + +  +L++
Sbjct: 667 R-FRDGSQLNG-----------------VPVDEAKNQIMTVLRK 692


>gi|296814972|ref|XP_002847823.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840848|gb|EEQ30510.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 739

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 42/482 (8%), Positives = 111/482 (23%), Gaps = 70/482 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  + +           +F 
Sbjct: 321 GCPFLLPNGTKIFNALQKLLRTEYRKRGYQEVQSPNM--YDVGIWRQSGHWAHYKDDMFK 378

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+                              +R        F    + +
Sbjct: 379 L-DVEKRDWALKPMNCPG-------------HCIMFGHRERSYRELPLRMADFGVLHRNE 424

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I      +    R I         L    +  +
Sbjct: 425 ASGALHGLTRVRKFQQDDTHIFCTDNQIMEEIEGLFDFLRAIYGLFGFSFKLKLSTRPEK 484

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L  L   D  +    + +    G     + GD                +F    ++ ++
Sbjct: 485 YLGKLETWDYAEAQLREALTKFKGADWDIDEGD---------------GAFYGPKIDITI 529

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  +                     ++         K+       +         A   
Sbjct: 530 SDALKR--------------EHQCATIQLDYQLPLNFKLEYMTGETVPKSAAP---ADPQ 572

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL-ESSTNN 371
                E                     R +   +             + ++         
Sbjct: 573 AEAKPEDDSKRAQAPTADPAA--PGPGRARPVVIHRAIIGSFERFFGILIEHFGGKWPFW 630

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +     +++  M   +D + + Q     LR   +  ++ L S      +++         
Sbjct: 631 LSPRQILIVPVMASANDYVEELQEI---LRGDKLNVDIDL-SGHTMQKKIRNGQLAQYNF 686

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             + G  E+    + I++                   ++     +P+ E  + ++ + +E
Sbjct: 687 IFVVGAQEKESRSVNIRNRDD--------------PSSQTKGSLVPLEEARAKLRALRKE 732

Query: 492 NK 493
            +
Sbjct: 733 RR 734


>gi|42520651|ref|NP_966566.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81831258|sp|Q73GW6|SYP_WOLPM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|42410390|gb|AAS14500.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 422

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 46/163 (28%), Gaps = 8/163 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  ++  G        + +   I D IR+     G      P ++ + SL +     D  
Sbjct: 31  LIKQIASGIYTWLPLGLLVLKNIEDIIRDEMNKSGAIEALMPCVQPA-SLWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +  ++D   + +       ++   L R V +++  +       +         R   
Sbjct: 90  GKEMLRIKDRHEEDMLFGPTHEEIATDLIRDVVKSYKDLPLCLYQIQWKFRDEVRPRYGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
                F        D     A  +   M        + +G   
Sbjct: 150 MRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGFTP 192



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 3/105 (2%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +      +E+ P  I  ++  +          + L++  +   ++  +  + G +    D
Sbjct: 321 DKGIIWPEEVAPFRIGLINLQTKVTEAADKIYKALKSDEV---LYDDTEGSVGVKFSRMD 377

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               P  II G    S  ++++K+ A G+    +I+   +   A+
Sbjct: 378 LIGLPWQIIVGKKAVSENIVEVKNRATGEVKEMQIEEAINHFSAK 422


>gi|229491433|ref|ZP_04385257.1| prolyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229321718|gb|EEN87515.1| prolyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 581

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 16/124 (12%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +   + D  +    +     L  AG+   +      + G + K
Sbjct: 473 DEKGLRWPAEVSPADVYLVIANKDETAREGAEGLAAQLDRAGLEVILD-DRKASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            ++    PL ++ G    + G ++I+D   G+    +  +               I E++
Sbjct: 532 DSELIGVPLIVVVG-RGWADGKVEIRDRFTGESREIDANS--------------AIEEII 576

Query: 483 STVK 486
           S V+
Sbjct: 577 SAVR 580


>gi|23099609|ref|NP_693075.1| threonine-tRNA ligase [Oceanobacillus iheyensis HTE831]
 gi|73919811|sp|Q8EPF3|SYT_OCEIH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|22777839|dbj|BAC14110.1| threonine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 646

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 70/258 (27%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  +   I ++ E  G+  + TP+L   +   K     D     +F  
Sbjct: 264 GLPLWLPKGATIRRNVERYIVDLEERLGYSHVYTPVLGNVELY-KTSGHWDHYQDDMFPT 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +   +             R  + G     +      
Sbjct: 323 MEMDNEELVLRPMNCP--------HHMMVFKNQLWSYRNLPVRIAELGTMHRHEMSGALA 374

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                 A T +        D L+   I+  +    +     +D    ++     +   + 
Sbjct: 375 GLQRVRAMTLNDAHIFARPDQLKEEFIRVVELVQHVYKDFGIDDYYFRLSYRDPEDKEKY 434

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      +K      + ++ +  E           G  L  +    +    ++   +   
Sbjct: 435 VDNDEMWEKAQAMLKETMEDMNLEYVEAEGEAAFYGPKLDVQVKTALGKDETLSTIQLDF 494

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E    T  GE G   
Sbjct: 495 HLPERFDLTYIGEDGNQH 512



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/222 (9%), Positives = 60/222 (27%), Gaps = 9/222 (4%)

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +      +   +  + V      EK    L    E +      +     ++     L
Sbjct: 416 IDDYYFRLSYRDPEDKEKYVDNDEMWEKAQAMLKETMEDMNLEYVEAEG--EAAFYGPKL 473

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +               +           +   G                +        + 
Sbjct: 474 DVQVKTALGKDETLSTIQLDFHLPERFDLTYIGEDGNQHRPVVIHRGVVSTME---RFVA 530

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             ++  + +         V I  +   +  L   +   + LR  G+R E+     +  G 
Sbjct: 531 FLIEEYKGAFPTWLAPVQVKIIPVSLQA-HLDYAKDIEEKLRYQGVRVELD-ERDEKIGY 588

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +++ A  +  P A++ G  E     +  +    G++ +  ++
Sbjct: 589 KIREAQTQKVPFALVLGDKEMESNSVNYR--RYGEQDTETLE 628


>gi|17537697|ref|NP_496781.1| hypothetical protein Y81G3A.3 [Caenorhabditis elegans]
 gi|4033522|emb|CAA22515.1| C. elegans protein Y81G3A.3a, partially confirmed by transcript
            evidence [Caenorhabditis elegans]
          Length = 1696

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 55/404 (13%), Positives = 123/404 (30%), Gaps = 27/404 (6%)

Query: 26   RNRILDSIRNIY----ENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFSLQDDDGQW 80
            R  +++++R  +    + + F+ + T  L    + L                + D  G  
Sbjct: 1059 REVLVETLRAEFCKILKIHSFEKLHTHTLMPVSTALAAASVRTKPVE-----VLDRSGVP 1113

Query: 81   ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            ++L  DL     R+   N    +      R+               +  +C VD +G   
Sbjct: 1114 VALPMDLRQNFVRFCVRNSVQRMKRFNFGRVYSQTSANG----HPHERWECCVDCIGPQC 1169

Query: 141  ETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
             +   E  +++      +G      + + I + ++++  +  + L  D +      +   
Sbjct: 1170 SSPSLEAELLLVACEMMIGSLPGMKFTLKIGHAQLIEAQIRHLKLSDDVRAELLDALHLI 1229

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
                     +    +L       + +      +  E              K +      V
Sbjct: 1230 SVSDRPHSHKEKMDMLTPKIGAKAANIITKLLIPVEDNFGAFKEKVACFRKKLKVDAARV 1289

Query: 260  KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
                A       +        ++    + +  S T  R   +  G +++  +  P     
Sbjct: 1290 LVDKAIRDLEEIVGTFKFCRTEAIEQISIVYDSQTCYRPRTFGDGLLFQIQVEKPSTIAN 1349

Query: 320  QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK----------SLESST 369
             K     +V  GGRYD  + R +          + IS   VA+              +  
Sbjct: 1350 NKRGRRQNVLAGGRYDSALLRERHPRDFVYEIPLCISGFGVAMDVVSQIRDSINKSANIP 1409

Query: 370  NNIKEMGPVLITTM--DHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
               +    VLI +M     S+ +++     + L + GI A++F 
Sbjct: 1410 KTPQNHCKVLICSMVQPDGSNLITQKFELAKKLWSMGIEADVFH 1453


>gi|269991505|emb|CBI63247.1| C. elegans protein Y81G3A.3b, partially confirmed by transcript
            evidence [Caenorhabditis elegans]
          Length = 1699

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 55/404 (13%), Positives = 123/404 (30%), Gaps = 27/404 (6%)

Query: 26   RNRILDSIRNIY----ENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFSLQDDDGQW 80
            R  +++++R  +    + + F+ + T  L    + L                + D  G  
Sbjct: 1059 REVLVETLRAEFCKILKIHSFEKLHTHTLMPVSTALAAASVRTKPVE-----VLDRSGVP 1113

Query: 81   ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            ++L  DL     R+   N    +      R+               +  +C VD +G   
Sbjct: 1114 VALPMDLRQNFVRFCVRNSVQRMKRFNFGRVYSQTSANG----HPHERWECCVDCIGPQC 1169

Query: 141  ETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
             +   E  +++      +G      + + I + ++++  +  + L  D +      +   
Sbjct: 1170 SSPSLEAELLLVACEMMIGSLPGMKFTLKIGHAQLIEAQIRHLKLSDDVRAELLDALHLI 1229

Query: 200  IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
                     +    +L       + +      +  E              K +      V
Sbjct: 1230 SVSDRPHSHKEKMDMLTPKIGAKAANIITKLLIPVEDNFGAFKEKVACFRKKLKVDAARV 1289

Query: 260  KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
                A       +        ++    + +  S T  R   +  G +++  +  P     
Sbjct: 1290 LVDKAIRDLEEIVGTFKFCRTEAIEQISIVYDSQTCYRPRTFGDGLLFQIQVEKPSTIAN 1349

Query: 320  QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK----------SLESST 369
             K     +V  GGRYD  + R +          + IS   VA+              +  
Sbjct: 1350 NKRGRRQNVLAGGRYDSALLRERHPRDFVYEIPLCISGFGVAMDVVSQIRDSINKSANIP 1409

Query: 370  NNIKEMGPVLITTM--DHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
               +    VLI +M     S+ +++     + L + GI A++F 
Sbjct: 1410 KTPQNHCKVLICSMVQPDGSNLITQKFELAKKLWSMGIEADVFH 1453


>gi|255327209|ref|ZP_05368284.1| threonine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295827|gb|EET75169.1| threonine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 677

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 40/122 (32%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                LR  G+R E+  GS + F  +++ A     P  +
Sbjct: 565 WLAPVQVIGVPVAEAFNDYMTEIADKLRAHGVRVEVDYGSDR-FTKKIRTASTEKVPFIL 623

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +   G +  +                        +  +P+ E V+ + + ++   
Sbjct: 624 IAGGEDAEHGAVSFR------------------FRGNKQENGVPVDEAVARIVEHIRNRV 665

Query: 494 EE 495
            E
Sbjct: 666 NE 667


>gi|225631202|ref|ZP_03787900.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591110|gb|EEH12294.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 422

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 46/163 (28%), Gaps = 8/163 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  ++  G        + +   I D IR+     G      P ++ + SL +     D  
Sbjct: 31  LIKQIASGIYTWLPLGLLVLKNIEDIIRDEMNKSGAIEALMPCVQPA-SLWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +  ++D   + +       ++   L R V +++  +       +         R   
Sbjct: 90  GKEMLRIKDRHEEDMLFGPTHEEIATDLIRDVVKSYKDLPLCLYQIQWKFRDEVRPRYGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
                F        D     A  +   M        + +G   
Sbjct: 150 MRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGFTP 192



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/105 (12%), Positives = 36/105 (34%), Gaps = 3/105 (2%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +      + + P  I  ++             + L++  +   ++  +  + G +    D
Sbjct: 321 DKGIIWPESVAPFRIGLINLQPKVTEAADKIYKALKSDEV---LYDDTEGSVGVKFSRMD 377

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               P  II G       ++++K+ A G+     I+   +    +
Sbjct: 378 LIGLPWQIIVGKKAIDEKIVEVKNRATGEVKEMPIEEAVNHFSTK 422


>gi|171742906|ref|ZP_02918713.1| hypothetical protein BIFDEN_02023 [Bifidobacterium dentium ATCC
           27678]
 gi|171278520|gb|EDT46181.1| hypothetical protein BIFDEN_02023 [Bifidobacterium dentium ATCC
           27678]
          Length = 708

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 45/404 (11%), Positives = 104/404 (25%), Gaps = 48/404 (11%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +        +    +     +       L+
Sbjct: 328 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGFDYYLK 387

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 388 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 447

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T   G   K   L    +++        +                 ++ 
Sbjct: 448 EQMKDELKNLLTFVLG-LLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEVAKES 506

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +            
Sbjct: 507 GLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYIAADGTHQRP 565

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 566 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 607

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +     Q +   L    +R E+ +   + FG +++ A +   P  +I G  + +   +  
Sbjct: 608 EFAPHLQRFIASLEEETVRCEIDMSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSF 666

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +    G +L+                  +P+ E  + +  +L++
Sbjct: 667 R-FRDGSQLNG-----------------VPVDEAKNQIMTVLRK 692


>gi|148643274|ref|YP_001273787.1| threonyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|166225460|sp|A5UMJ1|SYT_METS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148552291|gb|ABQ87419.1| threonyl-tRNA synthetase, ThrS [Methanobrevibacter smithii ATCC
           35061]
          Length = 608

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 91/343 (26%), Gaps = 16/343 (4%)

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                            + +  A    A  +  + +    N    L  +           
Sbjct: 262 HAAKFGERQYRTDTKKNLMLRFACCFGAFRVMADPFITWKNLPAKLYELSTYSFRFEKKG 321

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
               L  LRA    D            E  +    D      +  +    ++        
Sbjct: 322 EVVGLKRLRAFTMPDFHSFCADMNSTLEEFS-KQTDMCIQTGVDLDVNYEII----FRAT 376

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K  ++  +    +I  + G   L+ I    +              + R +E  T      
Sbjct: 377 KDFYDENKDWMYSIGKKIGKPVLLEILPERKHYWSCKIDFAAIDYLGRPIENPT------ 430

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            +   V + K+  + +    G   Y  ++      ++     S+       A++  E + 
Sbjct: 431 -VQIDVESGKRFDITYLGEDGKEHYPTILHCSPTGSIERVICSLLEKT---AIELDEKAP 486

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + P+ +  +    D           +    IR ++     ++ G +++ A     
Sbjct: 487 MLPTWLSPIEVRIITVGEDHKDFANELYDKINAENIRVDVD-DRDESVGKKIRNAATEWI 545

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P   + G  E+  G+  +     G+++   +         +  
Sbjct: 546 PYIFVVGDNEKESGVFSVTVRETGEKVDMTVDELIKEILDKTK 588


>gi|71021923|ref|XP_761192.1| hypothetical protein UM05045.1 [Ustilago maydis 521]
 gi|46100672|gb|EAK85905.1| hypothetical protein UM05045.1 [Ustilago maydis 521]
          Length = 1859

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 67/407 (16%), Positives = 118/407 (28%), Gaps = 59/407 (14%)

Query: 29   ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
            + D IRN    +G        +E++  L          N+ +  + D  G+ + L YDLT
Sbjct: 1187 VCDLIRNAARRHG-------AVEFTAPLIVPPNGLYTANEKIVQMLDRTGRVVHLPYDLT 1239

Query: 89   APLARYVA--ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
             P AR  A   N     +         V    +        F     +   ++   A A 
Sbjct: 1240 VPFARVFARSSNQRFKRYEISNVYRENVVAGGQPRAVLAASFDIVSPEKSAAAEAEALAL 1299

Query: 147  MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
            +  ++ +     GI   D+ I IN+  +L  ILE+I                        
Sbjct: 1300 VEEVLDEI---PGIANEDWVIHINHEVVLSMILERIPAKH-----------------HTA 1339

Query: 207  GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL---VKGTI 263
             L  V LL G     ++        L    I+ + +F   D   ++H   E    +    
Sbjct: 1340 VLGVVALLAGSKTIQSARTHLLQLGLPRSTIEELEAFNLNDEVSAVHRRLERLFPLDQRT 1399

Query: 264  AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPV 323
               K  +++  +    R  G     +           Y  G ++  +      +      
Sbjct: 1400 RLAKAVSQISDVVATARFFGVQRRFLFSPLLAQSSSLYRGGVLFTVVRAGKRRD------ 1453

Query: 324  VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV------------------ALKSL 365
                V  GGRYDGL+  F   +  ++    G+   +                    L   
Sbjct: 1454 ---VVAAGGRYDGLLKHFANPSTASSAPLHGVGVQLAVGKLTLGLSKYQEVQVPKLLSRT 1510

Query: 366  ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
            E   +            +      L       + L    I A++   
Sbjct: 1511 EEERSFGLYTPRRCDVYVASTPGLLETRMEICRELWAHNIAADLQYE 1557


>gi|182419627|ref|ZP_02950872.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237665561|ref|ZP_04525549.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376517|gb|EDT74094.1| threonyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237658508|gb|EEP56060.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 636

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +      +     GIR E+    ++  G +++ A     P  +
Sbjct: 535 WLAPVQVKVLPISDKFNNYCDEVVKQFNENGIRVEID-QRNEKIGYKIREARNERVPYIV 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E   G + ++    G E S  +K+        + 
Sbjct: 594 IIGEKEEGEGNISLRSRKNGDEGSINVKDLIERINNEIK 632



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R I+   G+  +ETP++  +  L +         + +++ 
Sbjct: 262 GFPFFLPKGVILKNSLIDFWRKIHYEAGYVEVETPIM-LNKKLWETSGHWYHYKENMYTS 320

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +L+      
Sbjct: 321 MI-DDEEFALKPMNCPG 336


>gi|145594327|ref|YP_001158624.1| threonyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145303664|gb|ABP54246.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Salinispora
           tropica CNB-440]
          Length = 671

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +   ++       +   LR AGIRA++  G  +    +++ A ++  P  +
Sbjct: 562 WLAPVQVVGIPIRAEHTEYLDGFVAALRAAGIRAQVDAGDDR-MQKKIRTAQQQKIPFMV 620

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  + + G +  +    G + +                  +P +E V+ V  ++    
Sbjct: 621 IAGDDDVAAGTMSFRY-RDGSQRNG-----------------VPAAEAVNHVLDVVNSRA 662

Query: 494 EE 495
            +
Sbjct: 663 NQ 664


>gi|84496326|ref|ZP_00995180.1| threonyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383094|gb|EAP98975.1| threonyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 661

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 42/118 (35%), Gaps = 19/118 (16%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           PV +  +    +           ++  GIR E+     + F  +++ A +   P A+I G
Sbjct: 562 PVQVLGLPVADEYNDYLWDVLSQMKAKGIRVELDDSDDR-FPKKIRNASKAKVPFALIAG 620

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
             +RS   +  +    G + +                  +PI + ++ V   ++   +
Sbjct: 621 EDDRSNNAVSFRY-RDGSQKNG-----------------VPIEDAIAEVLTAIETRAQ 660


>gi|319948036|ref|ZP_08022210.1| prolyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438275|gb|EFV93221.1| prolyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 581

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R   R+   +R   + +G   I  P L   E  ++ G++          +
Sbjct: 40  GVYSWLPLGLRTLRRVEQVVREEMDAFGAQEISLPALLPREPYETTGRWTE----YGPAL 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G  + L  
Sbjct: 96  FRLKDRKGNDMMLGP 110



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 31/106 (29%), Gaps = 4/106 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQL 421
                          V +   + D  ++       +    A  R E+     K + G + 
Sbjct: 473 DDKGLVWPAEAAPADVHVVIANKDQAAIDGAATLVEAFDRA--RLEVLFDDRKASPGVKF 530

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           K A+    P  ++ G    S G ++++  A G      +       
Sbjct: 531 KDAELIGVPWVVVVG-RGWSEGTVELRHRATGDVTQVAVDGAAEEI 575


>gi|300743963|ref|ZP_07072983.1| proline--tRNA ligase [Rothia dentocariosa M567]
 gi|300380324|gb|EFJ76887.1| proline--tRNA ligase [Rothia dentocariosa M567]
          Length = 605

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 1/109 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V I   + D+ S    +  +  L  AG++  +      + G +  
Sbjct: 496 DEKGLIWPRNLAPADVHIVITNKDAQSHEYAETLSAELEGAGVQVLLDDRLKTSPGVKFG 555

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            A+    P  ++ G      G L++KD   G+     + +      A +
Sbjct: 556 DAELLGVPTILVIG-RGFKDGTLELKDRRSGEARDIAVSDAVREILAEI 603



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  ++ + +R      G   +  P L   E  ++  ++    D     +
Sbjct: 40  GVYTWLPLGLKVLRKVENIVREEMNAIGAQEVLFPALLPREPYEATNRWEEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G  + L  
Sbjct: 96  FRLQDRKGADMLLAP 110


>gi|295836236|ref|ZP_06823169.1| proline-tRNA ligase [Streptomyces sp. SPB74]
 gi|295825921|gb|EFG64555.1| proline-tRNA ligase [Streptomyces sp. SPB74]
          Length = 563

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 49/134 (36%), Gaps = 5/134 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
           + D L    K   V    + IG+SR + AL      +       E+ P  +  +      
Sbjct: 424 QLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLCWPAEVAPADVHVVAAGKVL 483

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++        L  AG R  +   +  + G +   A+    P  +I G    + G++++K
Sbjct: 484 QTELALEVADKLAAAGARVLVDDRAGVSPGVKFTDAELIGVPKTVIAGRR-AAEGIVELK 542

Query: 449 DLAKGKELSREIKN 462
           D   G+     ++ 
Sbjct: 543 DRRTGEREELPVEE 556



 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ + I   +R   +  G   +  P L   +         +     +F L+D  
Sbjct: 46  WLPLGKKVLDNISQIVREELDAIGAQEVLLPALLPREPYEA-TGRWEEYGDLLFRLKDRK 104

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 105 GADYLLGP 112


>gi|262197934|ref|YP_003269143.1| threonyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262081281|gb|ACY17250.1| threonyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 628

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 36/106 (33%), Gaps = 2/106 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
              PV +  +      L   +     LR  G+R E+  G     G +++    +  P  +
Sbjct: 522 WCAPVQVRVLPISDPYLDYARTVVAALRKQGLRVELDDGRD-TLGKKIRNGKTQKVPYLV 580

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKN-NESWREARVAQITIPI 478
           + G  E +   + ++    G+    +  +         + +  +P 
Sbjct: 581 VVGENEATDNTVTVESYFDGRLGEVKTTDALIERMRDEIDRKVVPR 626


>gi|260942551|ref|XP_002615574.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238850864|gb|EEQ40328.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 453

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 50/471 (10%), Positives = 119/471 (25%), Gaps = 83/471 (17%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++  ++N    YGF  + TPL+ Y   L +     D     +F +    
Sbjct: 51  FLPHGTRIFNKLVHFMKNQQLKYGFQEVITPLI-YKTKLWEVSGHWDNYKDDMFKVI--- 106

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G  ++                                         +  +        + 
Sbjct: 107 GNDLT---------------------------------------KEKDSEEAHLHEYGLK 127

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHI--GINNRKILDGILEKIGLHGDDKLNERLI 195
                    +      +   + I+ +D+           L G+      H DD       
Sbjct: 128 PMNCPGHCLIFSKFERSYNELPIRLSDFSSLHRNEASGALSGLTRVRRFHQDD--GHIFC 185

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
            +  I +     +  +K        D++ D     +   E+         I   ++  E 
Sbjct: 186 EMDQIHQEITNTINLIKDTYNVFGIDSTKDVDFFLSTRPEKF--------IGDAQTWDEA 237

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +   +    G N+  +        G   + +   +   +         ++    F +
Sbjct: 238 ESQLASVLDTTAGKNKWSIREGDGAFYGPKIDILLTDAFNKKHQVGTIQLDFQLPARFEL 297

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKE 374
                                     +   +    F        + L          I  
Sbjct: 298 KYIS---------------RNGDRDNQPIMIHRAVFGSLERFFAILLDHYQGKWPFWINP 342

Query: 375 MGPVLITTMDHDSDSLSKYQM-YTQMLRTA----------GIRAEMFLGSSKNFGNQLKY 423
              ++I   D   ++  K Q      +  +              ++    S+  GN++K 
Sbjct: 343 RQAIIIPVSDKHHEAAEKLQKQLVGDIVNSESSIAPMTGYNFFVDVD-RRSETVGNRIKD 401

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           A ++     ++ G  +   G + I+     K  ++ ++       +   Q 
Sbjct: 402 AVKKGYSYILMVGDKDIENGTVAIRSRDSRKVENKTVEEIYEKFVSLEKQY 452


>gi|225376538|ref|ZP_03753759.1| hypothetical protein ROSEINA2194_02180 [Roseburia inulinivorans
          DSM 16841]
 gi|225211637|gb|EEG93991.1| hypothetical protein ROSEINA2194_02180 [Roseburia inulinivorans
          DSM 16841]
          Length = 66

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 10 ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
          +   G  D   +E++IR+ +   I+  Y N+GF  IETP +E   +L      E+ 
Sbjct: 6  KPVNGMKDILPEEMQIRDYVQQVIKETYRNFGFTQIETPCMENIANLSSKQGGENE 61


>gi|306818771|ref|ZP_07452493.1| threonine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304648457|gb|EFM45760.1| threonine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 692

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 43/121 (35%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  +   + LR   +R E+     + FG +++ A +   P  +
Sbjct: 590 WLAPVQVRLVPVADTFNAYCEDVAKQLRAENVRVEIDESDDR-FGKKIRNAAKDKVPFTL 648

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +   G +  +    G++ +                  + IS  +  + + ++  K
Sbjct: 649 IVGGEDAEHGAVSFRY-RGGEQKNG-----------------VKISAAIQEITETIRSRK 690

Query: 494 E 494
            
Sbjct: 691 N 691


>gi|291557532|emb|CBL34649.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           siraeum V10Sc8a]
          Length = 639

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M                L+  GIR E+  G S+  G +++ A  +  P  +
Sbjct: 535 WLAPVQVELMPIADRHNEFTSKVAAELKKRGIRVEVD-GRSEKIGFKIREAQLQKIPYML 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E     + I+   +G   +  + +     E  + + TI
Sbjct: 594 VIGDKEVETENVSIRCRKRGDIGTMSVADFCDMVEKEIREKTI 636



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R I+   G+  I TP++  +  L +     D   + +++ 
Sbjct: 262 GFPFFLPKGMTLKNTLIDYWRQIHTRDGYVEISTPIM-LNRQLWETSGHWDHYKENMYTT 320

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 321 VI-DDTEFAIKPMNCPG 336


>gi|319404243|emb|CBI77836.1| Prolyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 441

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 52/451 (11%), Positives = 119/451 (26%), Gaps = 61/451 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++ ++I   IR   E  G   I  P ++ +D L +     +  
Sbjct: 31  MVRQQTSGIYSWLPLGKKVLDKICKIIREEQERAGALEILMPTIQSAD-LWRESERYNDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GLEMLRIRDRQDRDLLYGPTNEEMVTDIFRSYVRSYKDLP--LNLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S      +         +  +             R  L  I     
Sbjct: 148 GVMRAREFLMKDAYSFDLDYASAKISYNRMFVAYLRTFS---------RVGLKAI----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      ++   G    + S +F   A      I      
Sbjct: 194 --------------------------PMRADTGPIGGELSHEFIILAKTGESSI------ 221

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                ++ +      V      +    ++V     +  +    +  +   + V      +
Sbjct: 222 --FCDKRFLEFTVPSVSIDFTDKDVLADIVRQWTSLYAATEEMHN-EEEWSKVSDSNKLS 278

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
               E    F    +   P+    +G     DG        +       +  + +  +  
Sbjct: 279 ARGIEVGHIFHFGTKYSAPMGAKVMGQ----DGKEHFVSMGSYGIGPSRLVAAVIESSHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                           I  M  D +  S   +   Q L  +G    +   S +  G++  
Sbjct: 335 EHGIIWPKSIAPFDFGIINMKPDDEKCSYICETLYQGLIRSGFDPLLDDTSER-PGSKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
             D    P+ +I G    ++  ++IKD   G
Sbjct: 394 TMDLIGLPVQMIIGPKNATQNEVEIKDRKTG 424


>gi|229085293|ref|ZP_04217535.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228698012|gb|EEL50755.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 642

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 72/258 (27%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP++     L +     D     ++  
Sbjct: 265 GMPFYLPKGQIIRNELESFLREIQQKYDYQEVRTPIMMN-QGLWEESGHWDHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +        R+YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKHKLRSYRDLPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +        +        I    R        ++    +D + + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIESEIKSVLQQ--IDYVYRTFGFEYEVELSTRPEDSMGDV 433

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            +  +A   L       ++ L  + R +       G  +     D +         +   
Sbjct: 434 ELWNQAESAL----ENVLESLNYKYRVNEGDGAFYGPKIDFHIKDALKRSHQCGTVQLDF 489

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E        E+    
Sbjct: 490 QMPEKFDLNYIDERNEKR 507



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/376 (10%), Positives = 99/376 (26%), Gaps = 13/376 (3%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
           +            F  E      +++        + +     ++       D +    + 
Sbjct: 270 LPKGQIIRNELESFLREIQQKYDYQEVRT---PIMMNQGLWEESGHWDHYKDNMYFSEVD 326

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
              + +   N      + +       D         +         L G+  +    + D
Sbjct: 327 NKSFALKPMNCPGHMLMFKHKLRSYRDLPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDD 386

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
                         +I  ++  +         E    +        G  EL   +E   +
Sbjct: 387 AH--LFVTPEQIESEIKSVLQQIDYVYRTFGFEYEVELSTRPEDSMGDVELWNQAESALE 444

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLV 338
           +   S   K       G  Y     +         ++                   D   
Sbjct: 445 NVLESLNYKYRVNEGDGAFYGPKIDFHIKDALKRSHQCGTVQLDFQMPEKFDLNYIDERN 504

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +           L + ++    +         V I  +  +       +   +
Sbjct: 505 EKRRPVVIHRAVLGSFDRFLGILIEHFGGAFPAWLASVQVKIIPVS-NLVHEEYTKEIEE 563

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L++ G+R E  +   +  G +++ A  +  P  ++ G  E   G + ++    G+E S 
Sbjct: 564 KLQSVGLRVERDV-RGEKLGYKIREAQIQKVPYVLVIGDKEMENGAVNVR--KYGEEKS- 619

Query: 459 EIKNNESWREARVAQI 474
           E+ +  ++ E+   +I
Sbjct: 620 EVVSLATFIESLQVEI 635


>gi|194210848|ref|XP_001916146.1| PREDICTED: similar to threonyl-tRNA synthetase 2, mitochondrial
           [Equus caballus]
          Length = 667

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 48/444 (10%), Positives = 112/444 (25%), Gaps = 82/444 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +   + +F+LQ   
Sbjct: 274 FLPRGTRVYNALVAFIRAEYSRRGFSEVKTPTL-FSTKLWELSGHWEHYQEDMFALQPPG 332

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                 R                                               D   + 
Sbjct: 333 SD----RP---------------------------------TGSQSDHSTSHPTDTLALK 355

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+ +         G L ++     D         
Sbjct: 356 PMNCPAHCLMFAHRPRSWRELPLRLADFGLHRAEVSGSLGGLTRLRRFQQD--------- 406

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D         ++  +  G  D           +          LS      + E   
Sbjct: 407 ---DAHIFCAPDQLEAEIR-GCLDFLRSIYAVLGFSFRLA------LSTRPSGFLGEPCL 456

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 457 WDQAEQVLQQALEEFGEPWDLNPGDGAFYGPKIDVHLHDALGRSHQCGTIQLDFQLPLRF 516

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  +                    +      +           L +  +S         
Sbjct: 517 DLQYKG----------------QAGALEHPVLIHRAVLGSVERMLGMLAESCGGKWPLWL 560

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V++  +  + +     +   + L+ AG+  ++   S      +++ A   +     
Sbjct: 561 SPFQVVVIPVGTEQE--GYAREAQRSLQAAGLVCDLDADSGLTLSRRVRRAQLAHYNFQF 618

Query: 434 IQGTGERSRGMLQIK---DLAKGK 454
           + G  E+S+  + I+   +   G+
Sbjct: 619 VVGQKEQSKRTVNIRTRDNRRLGE 642


>gi|92118653|ref|YP_578382.1| ATP phosphoribosyltransferase regulatory subunit [Nitrobacter
           hamburgensis X14]
 gi|91801547|gb|ABE63922.1| ATP phosphoribosyltransferase regulatory subunit [Nitrobacter
           hamburgensis X14]
          Length = 395

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 3/86 (3%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           + + +   G+   E  +L+ ++       ++ R  K ++   D   + + LR DLT P+A
Sbjct: 23  LLSSFAQAGYVKAEPAILQPAEPFLDLSGEDIR--KSLYLTSDAGSEELCLRPDLTIPVA 80

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNE 118
           R    +      P     +GPVFR  
Sbjct: 81  RDYLASGKA-GQPAGFCYLGPVFRYR 105


>gi|51245280|ref|YP_065164.1| threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50876317|emb|CAG36157.1| probable threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 657

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
              PV    ++   D +   +     LR A IR E  L  ++    +++ A     P  +
Sbjct: 555 WFSPVQARILNITDDQIEYGEKVYAELRAADIRVEKDL-RNEKLNYKIREAQLVKTPYML 613

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           I G  E+  G + ++ +  GK
Sbjct: 614 IIGDKEKEDGTVTVR-MRNGK 633



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 6/121 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++  +  G      K  R+R++I +  +  +  + ++ + TP +   D L K     D  
Sbjct: 273 MQDSIGPGLPLWLPKGARMRHQIEEFWKAEHYRHDYELLYTPHIARQD-LWKTSGHLDFY 331

Query: 67  NKGVFSLQDDDGQWISLRYDLTA---PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +++  D DG    ++         +  Y A+      FP R   +G V+R E+ G  
Sbjct: 332 ADSMYAGMDIDGVTYQIKPMNCPFHVGV--YKAKKRSYRDFPLRWCELGTVYRYERAGAL 389

Query: 124 R 124
            
Sbjct: 390 H 390


>gi|299135009|ref|ZP_07028200.1| prolyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298589986|gb|EFI50190.1| prolyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 445

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 57/451 (12%), Positives = 113/451 (25%), Gaps = 58/451 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R   +  G   +  P L+ +D L +     D         
Sbjct: 38  GIYAWLPLGFRVLKKIEKIVREEQDRAGAIELLMPTLQLAD-LWRESGRYDAYG------ 90

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                       ++     R    +   +                        +  +  V
Sbjct: 91  -----------PEM----LRIQDRHKREL-------------LYGPTNEEMITEIFRAYV 122

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            +  S              +     G+ R    +  +       I E       +K+   
Sbjct: 123 KSYRSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSF--DIDEAAARLSYNKMFVA 180

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            +   A   L       ++   G    D S +F   A      +      L + +  +  
Sbjct: 181 YLRTFARMGLKAI---PMRAETGPIGGDLSHEFIVLAETGESGVFCNKDVLDLPVPGA-- 235

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRGLEYYTGCVYEAILG 312
                        K + EL   +E V  +      +        RG+E      +     
Sbjct: 236 -DVNYDGDLTPIIKQWTELYAATEDVHDTARYEKEVPADKRVNTRGIEVGQIFYFGT--- 291

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
               ++  K +V GS G      G         +                          
Sbjct: 292 --KYSDSMKALVVGSDGAEKPIHGGSYGIGVSRLVGAIIEACH-------DENGIQWPEE 342

Query: 373 KEMGPVLITTMDHDS-DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                V I  +   + D+ +  +   + L  AG+   ++  + +  G +   AD    P 
Sbjct: 343 VAPFRVAILNLKQGAADTDTACEKLYKELSAAGVDV-LYDDTDQRPGGKFATADLIGIPW 401

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            I+ G    + G ++IK  A G      +  
Sbjct: 402 QILVGPKGLAEGKVEIKKRADGSREMMSVDE 432


>gi|241889888|ref|ZP_04777186.1| threonyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863510|gb|EER67894.1| threonyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 647

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 39/121 (32%), Gaps = 2/121 (1%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             +   L+  +           V I  +++D       +   Q L+ AG++  +     +
Sbjct: 525 RMVAFLLEEYKGDLPTWLSPNQVRIIPVNNDY-HYDYSKEIMQELKKAGVKVAID-DRDE 582

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +++ A  +  P  ++ G  E     + ++      +        +      + +  
Sbjct: 583 KLGYKIREAASKKIPYTLVIGDKEVENRNVNVRTFGSLNQKEESFAEFKENILREINERL 642

Query: 476 I 476
           I
Sbjct: 643 I 643


>gi|144899402|emb|CAM76266.1| Threonyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 638

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 49/359 (13%), Positives = 105/359 (29%), Gaps = 22/359 (6%)

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
            +      E +   +  Q +   +      A+     M  +       + +K  +    +
Sbjct: 281 YMRNRLEAENYQEVKTPQLVDFSLWEASGHADKFSESMFTIKTQDERHLAVKPMNCPCHV 340

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
                  GI     L    ++ E     R        G+  V+        D++  F   
Sbjct: 341 QI--FRQGIKSYRDLPL--RMAEFGSCHRYEPSGALHGIMRVRA----FTQDDAHIFCTE 392

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
             +TSE I        +  +    ++            G +E     +        +   
Sbjct: 393 DQITSETIAFCQLLKLVYQDFGFTDVRVKFSDRPEKRAGSDE--TWDKAESALLAAAQAA 450

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS-----RFKGQ 344
            + +T+  G   + G   E +L   +  + Q   +        R D   +     R +  
Sbjct: 451 GLETTLNPGEGAFYGPKLEFVLRDAIGRDWQCGTLQVDFVLPERLDASYTAEDGSRRRPV 510

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG 404
            +           + + +++             V++ T+  D+D     Q     LR AG
Sbjct: 511 MLHRAVLGSFERFIGILIENFAGRFPLWLSPIQVVVATIVSDAD--DYAQSVAAKLRGAG 568

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNC--PLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +R E  L + K        A+  N   P+ ++ G  E   G + ++ L    +    + 
Sbjct: 569 LRVETDLRNEKINKKV---AEHSNAKVPVLLVVGRREAEEGTVAVRRLGSQGQEFLALD 624



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/163 (9%), Positives = 47/163 (28%), Gaps = 1/163 (0%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +RN  E   +  ++TP L    SL +     D+ ++ +F++
Sbjct: 263 GAVFWHQKGWALYRTVESYMRNRLEAENYQEVKTPQLVDF-SLWEASGHADKFSESMFTI 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +  D + ++++        +   +   +                 +              
Sbjct: 322 KTQDERHLAVKPMNCPCHVQIFRQGIKSYRDLPLRMAEFGSCHRYEPSGALHGIMRVRAF 381

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
               +     + ++        + + +   D+       K  D
Sbjct: 382 TQDDAHIFCTEDQITSETIAFCQLLKLVYQDFGFTDVRVKFSD 424


>gi|52143093|ref|YP_083736.1| threonyl-tRNA synthetase [Bacillus cereus E33L]
 gi|51976562|gb|AAU18112.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 639

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWIAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   +  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+
Sbjct: 575 DM-RDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSDVIE 623



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/258 (10%), Positives = 67/258 (25%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      +  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------EYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDKLWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E        EK    
Sbjct: 490 QMPEKFDLNYIDEKNEKR 507


>gi|11498521|ref|NP_069749.1| glycyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3334354|sp|O29346|SYG_ARCFU RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|2649683|gb|AAB90321.1| glycyl-tRNA synthetase (glyS) [Archaeoglobus fulgidus DSM 4304]
          Length = 570

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 20/132 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +              V +  +       SK     QMLR  GI        S + G + +
Sbjct: 448 ERRVLRLKRWVSPIEVAVLPLLSREPFESKGMEIVQMLREEGIFT--DYDDSGSIGRRYR 505

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
             D    P  +           + I+D                      AQ+ + + EL 
Sbjct: 506 RFDEIGTPFCVTVDHQTFEDETVTIRDRDT------------------TAQVRVKLGELP 547

Query: 483 STVKKILQENKE 494
           S +K++L+  K+
Sbjct: 548 SILKELLRSEKD 559



 Score = 36.7 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 5/50 (10%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY---ENYGFDPIETPLLEYSDSLGKFL 60
          GF D       +R +I +  R  +   E      I+TP +   +      
Sbjct: 28 GFIDYAPLGNNLRRKIENIWRKYFVINER--AAEIDTPTIGIEEVFIASG 75


>gi|229102972|ref|ZP_04233661.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228680387|gb|EEL34575.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 640

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 67/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  ++  +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMGQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYANEVADKLAQAGVRIER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  + 
Sbjct: 575 DMRDEK-LGYKIREAQMQKIPYVLVIGDKEMENGSVNVR--KYGEEKSEVVA 623



 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/257 (10%), Positives = 67/257 (26%), Gaps = 15/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      +  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMGQIDYVYKTFGF------EYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDKLWEQAEAALENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFN 270
           ++ E        EK   
Sbjct: 490 QMPEKFDLNYIDEKNEK 506


>gi|54026044|ref|YP_120286.1| prolyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81822939|sp|Q5YSB9|SYP_NOCFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|54017552|dbj|BAD58922.1| putative prolyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 585

 Score = 59.9 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 32/92 (34%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +   + D  + +  +     L   G+   +F   + + G + K
Sbjct: 477 DEKGLRWPAAVAPFDVHVVVANKDEAARTGAEQVVAGLDAQGLDV-LFDDRTASPGVKFK 535

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    P  ++ G    + G +++++   G+
Sbjct: 536 DAELLGMPWVVVIG-RGWADGTVELRNRFTGE 566



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+  ++ D +R      G   I  P L   +  ++  ++    D     +
Sbjct: 40  GVYSWLPLGLRVLRKVEDVVRAEMNAIGGQEISLPALLPRDPYETTNRWTEYGD----SL 95

Query: 71  FSLQDDDGQWISLRY 85
           F L D  G    L  
Sbjct: 96  FRLHDRKGADYLLGP 110


>gi|209558991|ref|YP_002285463.1| threonyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238065119|sp|B5XKA6|SYT_STRPZ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|209540192|gb|ACI60768.1| Threonyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 647

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/378 (9%), Positives = 101/378 (26%), Gaps = 16/378 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +         Q D+  V    +  +  +  M       V 
Sbjct: 282 KELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVY 341

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 342 KNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRAL 401

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   +     ++  E+ +   +  K   +  +  +  
Sbjct: 402 QLIIDVY---ADFNLTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALD-EMGVDYF 457

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 458 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 506

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       ++
Sbjct: 507 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKI 566

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+RA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 567 LRDRGVRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTES 625

Query: 460 IKNNESWREARVAQITIP 477
           +++      A +A+ + P
Sbjct: 626 VEDFVENILADIARKSRP 643



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 75/323 (23%), Gaps = 25/323 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F +
Sbjct: 260 GLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPV 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N           I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVRSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    I      I    ++ L  I++            
Sbjct: 359 GMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNLTDYRF 418

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           RL      D    +    +             +          +       L I ++ ++
Sbjct: 419 RLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDIQVKTAL 478

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               E +                 + +   G     + I   ++  +E +T  + E   G
Sbjct: 479 -GNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKG 535

Query: 313 FPVMNEKQKPVVFGSVGGGGRYD 335
                     V    +      D
Sbjct: 536 AFPTWLAPHQVTVIPISNEAHID 558


>gi|327188321|gb|EGE55539.1| threonyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 668

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/365 (11%), Positives = 103/365 (28%), Gaps = 10/365 (2%)

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG- 168
            +      +       +       +  G      +    +  A  +     K  D  +  
Sbjct: 282 YMRRRLAADYQEVNAPQVLDTSLWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRVFA 341

Query: 169 ---INNRKILDGILEKIGLHGDDKLNERLIVL--RAIDKLDKFGLQGVKLLLGEGRTDNS 223
              +N    +      +  + +  +      L  R        GL  V+    +      
Sbjct: 342 LKPMNCPGHVQIFKHGLKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFC 401

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
            D    A        I+  +     ++ + +L    +  +  +  ++    +   V K+ 
Sbjct: 402 TDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTI 461

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
              +  +I + I+ G   + G  +E  L   +  E Q            R+         
Sbjct: 462 EAQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNS 521

Query: 344 QNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           +            G     + +     + +    + P+ +      S++ +      + L
Sbjct: 522 EKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEAL 581

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R AG+  E     ++    +++       P+ I+ G  E     + I+ L    ++S E+
Sbjct: 582 RDAGLNVETDF-RNEKINYKIREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMEL 640

Query: 461 KNNES 465
                
Sbjct: 641 DAAVE 645


>gi|260432610|ref|ZP_05786581.1| ATP phosphoribosyltransferase regulatory subunit [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416438|gb|EEX09697.1| ATP phosphoribosyltransferase regulatory subunit [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 362

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 105/355 (29%), Gaps = 40/355 (11%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVA 96
           +E  G   ++ PLL+ +++L     ++ R    V S      Q   LR D T P+   V 
Sbjct: 18  FEAAGAQVVDPPLLQSAETLLDLYGEDIRARAYVTSDALRGEQM--LRPDFTLPV---VQ 72

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE--------------- 141
            +      P R    G VFR ++H P R  ++IQ   +                      
Sbjct: 73  MHMRDGAEPARYTYSGEVFRRQEHDPDRANEYIQVGYEVFDRDDPAGADAEVFSLFALQL 132

Query: 142 --------TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI----GLHGDDK 189
                   T D  +       L     ++      +   +    +L++            
Sbjct: 133 RGLPLRAATGDIGILTAAVQGLRTSDQRKAALMRHLWRPRRFRALLDRFAGRKPEPDHRA 192

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
                    A D       +  ++           D    ++     +D ++  +   + 
Sbjct: 193 ALLGAADPMACDAPMIGKRRPAEIAARIAALRADRDTPPISDTEMAGLDALLG-VRETMP 251

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
            ++  L ++           + L      ++  G + +++   ++  R          E 
Sbjct: 252 YALEHLRDIAVDLPQITPALDRLEARIAALQARGVDVSKLDFEASYGR-------TSMEY 304

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
             GF      ++      +  GGRYD L  R            +    L++ ++ 
Sbjct: 305 YDGFVFGFYAERRPDLPPIATGGRYDALTRRLGNGAEIPAVGGVLRPDLMLEIEE 359


>gi|228999356|ref|ZP_04158935.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006911|ref|ZP_04164541.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754311|gb|EEM03726.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228760301|gb|EEM09268.1| Threonyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 643

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/337 (12%), Positives = 95/337 (28%), Gaps = 23/337 (6%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M M   + +       +   +  N+      +  +I   G     
Sbjct: 309 TSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRY 368

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT------SEQIDIMVSFLS 245
           E    L  + ++    L    + +   +            L        E     +S+  
Sbjct: 369 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKDFGLENYSFRLSYRD 428

Query: 246 IDLEKSMHELYELVKGTIAG-EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +  K  +   E+ +   +  ++  +E+    E     G  +         VR       
Sbjct: 429 PEDTKKYYADDEMWEKAQSMLKEAMDEM--GLEYYEAEGEAAFYGPKLDVQVRTALGKDE 486

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +    L F +    +   V          DG   R    +            +   ++ 
Sbjct: 487 TLSTVQLDFLLPERFELTYVGE--------DGKPHRPVVIHRGVVSTM--ERFVAFLIEE 536

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            + +         V +  +      L   +   + L+ AGIR E+     K  G +++ A
Sbjct: 537 YKGAFPTWLAPVQVQVIPVSPQV-HLDYAKKVQEDLQRAGIRVEVDTREEK-IGYKIREA 594

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +  P  ++ G  E +   + ++    G++ S  I 
Sbjct: 595 QMQKIPYMLVVGDNEVAENGVNVR--KYGEQKSETIA 629



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 60/220 (27%), Gaps = 9/220 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L   +         +    G+F  
Sbjct: 265 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVLGSRELYETS-GHWNHYRDGMFPS 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGTMHRYEMSGALSG 376

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA + +      E +  +  +  + +     L+    ++     +   + 
Sbjct: 377 LQRVRGMTLNDAHIFVRPDQIKEELK-RVVNLTLEVYKDFGLENYSFRLSYRDPEDTKKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                  +K      + +  +  E           G  L 
Sbjct: 436 YADDEMWEKAQSMLKEAMDEMGLEYYEAEGEAAFYGPKLD 475


>gi|217962055|ref|YP_002340625.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222098038|ref|YP_002532095.1| threonyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229141301|ref|ZP_04269839.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|217064460|gb|ACJ78710.1| threonyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221242096|gb|ACM14806.1| threonyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228642082|gb|EEK98375.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 645

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/449 (11%), Positives = 112/449 (24%), Gaps = 85/449 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L                       
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVL----------------------- 303

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                + +                                   N           +  + 
Sbjct: 304 ---GSREL----------------------------YETSGHWNHYRDGMFPSMEMDNEE 332

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  +      +R  + G L  +         +R
Sbjct: 333 LVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTM--HRYEMSGALSGL---------QR 381

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSM 252
           +  +   D         +K  L          +    +   E     +S+    D +K  
Sbjct: 382 VRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVY---KDFGLENYSFRLSYRDPADTKKYY 438

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +     K     ++  +E+    +     G  +         VR        +    L 
Sbjct: 439 ADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLD 496

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    +   V               + +   +     S     +   ++  + +    
Sbjct: 497 FLLPERFELSYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTW 546

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V +  +      L   +     LR AG+R E+     K  G +++ A  +  P  
Sbjct: 547 LAPVQVQVIPVSPQV-HLDYAKKVQDELRRAGMRVELDTREEK-IGYKIREAQMQKIPYM 604

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           ++ G  E +   + ++    G++ S  I 
Sbjct: 605 LVVGDNEVTENGVNVR--KYGEQKSETIA 631


>gi|332287873|ref|YP_004422774.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313848445|emb|CBY17449.1| threonyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506736|gb|ADZ18374.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328915135|gb|AEB55968.1| threonyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 635

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/143 (9%), Positives = 40/143 (27%), Gaps = 2/143 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + I + ++   + +++  G+  I+TP L    SL +         + +++L
Sbjct: 256 GMPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLMNR-SLWEVSGHWSNYRENMYTL 314

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +  D +  +++         Y      +                 +              
Sbjct: 315 KI-DDEDYAIKPMNCPGCMLYYKTRLHSYKQFPLRIAEIGHVHRYEVSGALSGLMRVRAF 373

Query: 134 DNVGSSAETADAEMCMMMADTLE 156
               +       ++     + L 
Sbjct: 374 HQDDAHVFLTPEQVEEETLNILH 396



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/234 (9%), Positives = 61/234 (26%), Gaps = 6/234 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     +  E ++I+     +     +    EL         G +EL  ++ 
Sbjct: 373 FHQDDAHVFLTPEQVEEETLNILHLVSELYSTFGLEYHLELSTRPEKATIGSDELWELAT 432

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRY 334
              +    ++          G  Y                +       +           
Sbjct: 433 AALERALINSNTPFIINPGDGAFYGPKIDIHVKDAIQRTWQCGTIQLDMFLPERFELEYT 492

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +    +     +    F      L + ++  +           + + T+        + Q
Sbjct: 493 NAQGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHIRLITVA--DRHQPRAQ 550

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                 +  G+   +   S+++   +++ A        +  G  E  +  L I+
Sbjct: 551 KLATAWQKLGLIVTVD-DSNESVSKKIRNAQNMQVNYMVTLGDREIEQNTLAIR 603


>gi|291531005|emb|CBK96590.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium
           siraeum 70/3]
          Length = 639

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M                L+  GIR E+  G S+  G +++ A  +  P  +
Sbjct: 535 WLAPVQVELMPIADRHNEFTSKVAAELKKRGIRVEVD-GRSEKIGFKIREAQLQKIPYML 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E     + I+   +G   +  + +     E  + + TI
Sbjct: 594 VIGDKEVETENVSIRCRKRGDIGTMSVSDFCDMVEKEIREKTI 636



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R I+   G+  I TP++  +  L +     D   + +++ 
Sbjct: 262 GFPFFLPKGMTLKNTLIDYWRQIHTRDGYVEISTPIM-LNRQLWETSGHWDHYKENMYTT 320

Query: 74  QDDDGQWISLRYDLTAP 90
              DG   +++      
Sbjct: 321 VI-DGTEFAIKPMNCPG 336


>gi|84501591|ref|ZP_00999763.1| prolyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84390212|gb|EAQ02771.1| prolyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 445

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/463 (10%), Positives = 113/463 (24%), Gaps = 67/463 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  RI   +    +  G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQASAGIYSWLPLGYRVLRRIEQIVHEEQQRAGHIPLLMPTLQSAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       +L   + R    ++  +      Y I   FR+E     
Sbjct: 90  GPEMLRIRDRHDRDMLFGPTNEELITDIFRSYVRSYKDLPM--TLYHIQWKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFLM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A     +       
Sbjct: 180 SYLRTYERMGLQAI------------PMRADSGPIGGDDTHEFLVLAETGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D E +  +  +      + E+    L   +    ++    +    +           
Sbjct: 221 VFYDSEITDLKFGDREIDYDSVEQCQAVLEEFTSRYARTDETHDEEVFNRIPEDRRRVAR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F     +               DG        +       +  + +  +  
Sbjct: 281 GIEVGQIFYFGTKYSEPMGATVQGP------DGKQVPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE----MFLGSSKNFGN 419
                         V I  +    D         Q L   G  A     ++    +  G 
Sbjct: 335 DKGIIWPEGVTPFHVGIVNLKQGDDEADAA---CQALYD-GFTALGLDPLYDDRDERAGG 390

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           +    D    P  I  G      G++++     G+      + 
Sbjct: 391 KFATMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEELPPEE 433


>gi|332297469|ref|YP_004439391.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180572|gb|AEE16260.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 583

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/261 (11%), Positives = 73/261 (27%), Gaps = 6/261 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK--GFNELVVISEL 278
           D++  F   A + SE          +  +    +   LVK +   EK  G +     +E 
Sbjct: 322 DDAHIFCTEAQIPSEVAKFCHLLKDMYKDFGFTDDKILVKFSTRPEKRVGDDATWDRAEG 381

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
                     +        G  Y     +  +       +     V   +    R +   
Sbjct: 382 ALADACKQAGLAYEIQPGEGAFYGPKLEFTLVDALGREWQCGTIQVDYQLPSAERLNAEY 441

Query: 339 SRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
                            +G     + +     +      +       +          + 
Sbjct: 442 IGDDNAKHHPVMLHRAVLGSLERFIGILIENFAGAFPTWLHYQQTVVIPVAPAFNGYAEK 501

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
               L+ AGIR++  LG+ +    +++ A  +  P  ++ G  E + G + ++      +
Sbjct: 502 VQAALKAAGIRSDCDLGNDR-MNAKIRLAQTQKIPYMLVVGEKEAADGTVAVRFRDGRPQ 560

Query: 456 LSREIKNNESWREARVAQITI 476
               + +  ++    V    +
Sbjct: 561 QIMSVGDFTAYVRETVENHVV 581


>gi|229169303|ref|ZP_04297013.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614066|gb|EEK71181.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 645

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 91/337 (27%), Gaps = 23/337 (6%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M M   + +       +   +  N+      +  +I   G     
Sbjct: 311 TSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRY 370

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT------SEQIDIMVSFLS 245
           E    L  + ++    L    + +   +            L        E     +S+  
Sbjct: 371 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKDFGLENYSFRLSYRD 430

Query: 246 I-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +K   +     K     ++  +E+    +     G  +         VR       
Sbjct: 431 PADTKKYYADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDE 488

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +    L F +    +   V               + +   +     S     +   ++ 
Sbjct: 489 TLSTVQLDFLLPERFELTYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEE 538

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            + +           +  +      L   +     LR AGIR E+     K  G +++ A
Sbjct: 539 YKGAFPTWLAPVQAQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREA 596

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +  P  ++ G  E +   + ++    G++ S  I 
Sbjct: 597 QMQKIPYMLVVGDNEVTENGVNVR--KYGEQKSETIA 631



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L   +         +    G+F  
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVLGSRELYETS-GHWNHYRDGMFPS 325

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D + + LR             +         +YR  P+   E     R+  
Sbjct: 326 MEMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGTMHRYEM 372


>gi|225023763|ref|ZP_03712955.1| hypothetical protein EIKCOROL_00627 [Eikenella corrodens ATCC
           23834]
 gi|224943457|gb|EEG24666.1| hypothetical protein EIKCOROL_00627 [Eikenella corrodens ATCC
           23834]
          Length = 570

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/294 (9%), Positives = 70/294 (23%), Gaps = 10/294 (3%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++   +R      G   +  P+++ +D L K  
Sbjct: 26  MLRAGLIKANA-SGLYTWMPMGLRVLRKVEAVVREEMNRAGAIELLMPVIQPAD-LWKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR--IGPVF 115
              D     +  + D             +L   + R    ++  +       +       
Sbjct: 84  GRWDFYGDELLRITDRHDNTFCFSPTCEELITDIVRKEITSYKQLPKNFYHIQTKFRDER 143

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R            ++                   M             DY     +   +
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHADYESLVREGYQPMYNAYCRVFDRLGLDYRPVAADTGSI 203

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQG-VKLLLGEGRTDNSGDFTKGANLTS 234
            G          +   + +      D      L   ++          +        +  
Sbjct: 204 GGTGSHEFQVLAESGEDVIAYSSESDFAANIELAPTLRQSGERAPAQAALAKVHTPGV-- 261

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           + I  +V FL I +E+++  +    +                  ++       R
Sbjct: 262 KTIPELVEFLQIPIERTLKSIVLEGEEEGELVLLLLRGDHEFNDIKAEKLPGVR 315


>gi|152976959|ref|YP_001376476.1| threonyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025711|gb|ABS23481.1| threonyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 643

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 94/337 (27%), Gaps = 23/337 (6%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M M   + +       +   +  N+      +  +I   G     
Sbjct: 309 TSGHWNHYRDGMFPSMQMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRY 368

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT------SEQIDIMVSFLS 245
           E    L  + ++    L    + +   +            L        E     +S+  
Sbjct: 369 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKDFGLENYSFRLSYRD 428

Query: 246 IDLEKSMHELYELV-KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +  K  +   E+  K     ++  +E+    E     G  +         VR       
Sbjct: 429 PEDTKKYYADDEMWEKAQGMLKEAMDEM--GLEYYEAEGEAAFYGPKLDVQVRTALGKDE 486

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +    L F +    +   V               + +   +     S     +   ++ 
Sbjct: 487 TLSTVQLDFLLPERFELTYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEE 536

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            + +         V +  +      L   +   + L+ AGIR E+     K  G +++ A
Sbjct: 537 YKGAFPTWLAPVQVQVIPVSPQV-HLDYAKKVQEELQRAGIRVEVDTREEK-IGYKIREA 594

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +  P  ++ G  E +   + ++    G++ S  I 
Sbjct: 595 QMQKIPYMLVVGDNEVAENGVNVR--KYGEQKSETIA 629



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 71/258 (27%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G++ + TP+L   +         +    G+F  
Sbjct: 265 GLPLWLPKGATIRRIIERYIVDKEVSLGYNHVYTPVLGSRELYETS-GHWNHYRDGMFPS 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MQMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGTMHRYEMSGALSG 376

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA + +      E +  +  +  + +     L+    ++     +   + 
Sbjct: 377 LQRVRGMTLNDAHIFVRPDQIKEELK-RVVNLTLEVYKDFGLENYSFRLSYRDPEDTKKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +K      + +  +  E           G  L  +    +    ++   +   
Sbjct: 436 YADDEMWEKAQGMLKEAMDEMGLEYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLDF 495

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  + T  GE G   
Sbjct: 496 LLPERFELTYVGEDGKQH 513


>gi|148264672|ref|YP_001231378.1| threonyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398172|gb|ABQ26805.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Geobacter
           uraniireducens Rf4]
          Length = 645

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 1/73 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    + +S        LR AGIR +     ++  G +++ A  +  P  +
Sbjct: 545 WLAPVQAIVLTVTDNQVSYANEIYTALRAAGIRVQQDF-RNEKLGFKIREAQLQKIPYML 603

Query: 434 IQGTGERSRGMLQ 446
           I G  E   GM+ 
Sbjct: 604 IIGDKEVESGMVT 616


>gi|88855365|ref|ZP_01130029.1| prolyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815272|gb|EAR25130.1| prolyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 593

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R + P G        +++R +I   IR   E++G   +  P L   E  +  G++    
Sbjct: 34  IRRQAP-GVFAWLPLGLKVRRKIEAIIREELESFGAQEVLFPALLPREPYELTGRWTEYG 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D    G+F L+D       L  
Sbjct: 93  D----GIFRLKDRKDADYLLAP 110



 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 1/99 (1%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        V I     D+      +     L +AG+          + G +   A
Sbjct: 490 KGLLWPKNISPFDVHIVAAGKDAVVFETAESLVTTLESAGLDVLFDDRVKVSPGVKFGDA 549

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +    P  +I G    + GM+++ D    +  S  I + 
Sbjct: 550 ELLGVPKIVIVGRD-AANGMVEVWDRVTNERTSTAIADV 587


>gi|71655606|ref|XP_816364.1| threonyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70881486|gb|EAN94513.1| threonyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 817

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/489 (10%), Positives = 127/489 (25%), Gaps = 36/489 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N +++  R  Y   GF+ + +P + +S  L       D+    +F +
Sbjct: 323 GSAFWLPHGARIYNALVEFQRKQYRRRGFEEVVSPNM-FSSKLWMVSGHWDKYADNMFRI 381

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHG------PGRFR 126
             +      ++           A    +    P R    G + RNE  G        R  
Sbjct: 382 VVEKEDH-GMKPMNCPGHCIMYAMQQHSYKELPIRYADFGVLHRNELSGALTGLTRVRRF 440

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR------------NDYHIGINNRKI 174
           Q     +       +       + + D    +G K                 +       
Sbjct: 441 QQDDAHIFCRMDQVQEEIQGALVFLDDVYRTLGFKFFLKHATRPENKLGTEEMWDQAEAY 500

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L   L       +   +             +  ++ ++ LL +   +     T+      
Sbjct: 501 LRAALNSFCGIPEHLPDPFKEGATFTFDGRRDSVKKLRALLKKQAANRENKDTEKKEEKD 560

Query: 235 E--QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
           +  +          +         ++        +  ++   +            +  + 
Sbjct: 561 DEWKGPTHADAWEENTGDGAFYGPKIDIVVEDALRRRHQCATVQLDFNLPQRFGLKYTLP 620

Query: 293 STIVRGLEYYTGCVYEAILGFPVMN------------EKQKPVVFGSVGGGGRYDGLVSR 340
           ++ V G        + A    P +             E +    +         D  +  
Sbjct: 621 TSTVEGGAGAEAKEHHADPNAPKVGTDATTAEGKPEAEDEFLSSYEKAAKELCIDRRLDA 680

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            + + V       G     +A+            + P  +  +   +++ +         
Sbjct: 681 NQARPVMIHRAIFGSLERCIAILCEHYGGEWPLWLSPRQVIVIPVSAENTAYATKVRDAF 740

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
              G  A++  G++     +++ A+        + G  E     + ++     +  ++ +
Sbjct: 741 YADGFHADVDSGNA-TLDKKIRNAEVARYNFIFVVGQVEEETQTVNVRTRDNRRHGTKSL 799

Query: 461 KNNESWREA 469
              + W   
Sbjct: 800 AEVQRWLRE 808


>gi|317121664|ref|YP_004101667.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermaerobacter
           marianensis DSM 12885]
 gi|315591644|gb|ADU50940.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Thermaerobacter
           marianensis DSM 12885]
          Length = 644

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +   + LR  G+R E+     +  G +++ A     P  +
Sbjct: 540 WLAPVQVRVLPVSDRHHDYARRVEERLRAEGLRVEVD-ARDEKLGYKIRQAQVEKVPYML 598

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G  E   G + ++   +G   S+ ++       A VA+ 
Sbjct: 599 VVGDREAQEGTVAVRSRDRGDLGSQPLEAFARQVAAAVAER 639



 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E+  G+A    K   +   +    R +   YG+  + TP +   D   +     +   + 
Sbjct: 263 EIAPGYAFWHPKGATVYGLLERFSRELQARYGYQEVRTPEILKVDLWHRS-GHWEHYREN 321

Query: 70  VFSLQDDDGQWISLRYDLTAP 90
           +F L + +G    ++      
Sbjct: 322 MF-LIEREGAQFGVKPMNCPG 341


>gi|239982632|ref|ZP_04705156.1| prolyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291454473|ref|ZP_06593863.1| prolyl-tRNA synthetase 1 [Streptomyces albus J1074]
 gi|291357422|gb|EFE84324.1| prolyl-tRNA synthetase 1 [Streptomyces albus J1074]
          Length = 564

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
           + D L  + K   V    + IG+SR + AL              E+ P  +  +      
Sbjct: 425 QLDVLGQQGKPVRVTMGSYGIGVSRAVAALAEQTADGQGLCWPAEVAPADVHVVAAGKAL 484

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++     ++ L  AG+R  +   +  + G +   A+    P  ++ G    + G++++K
Sbjct: 485 QTELALEVSEKLNAAGVRVLVDDRAGVSPGVKFTDAELIGVPKILVAGRRS-ADGIVELK 543

Query: 449 DLAKGKELSREIKN 462
           D   G+     +  
Sbjct: 544 DRRTGEREELPVAE 557



 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ + I   +R   +  G   +  P L   +         +     +F L+D  
Sbjct: 46  WLPLGKKVLDNISHIVREEMDAIGAQEVLLPALLPKEPYEAS-GRWEEYGDLLFRLKDRK 104

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 105 GADYLLGP 112


>gi|124804231|ref|XP_001347941.1| threonine -- tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23496195|gb|AAN35854.1|AE014840_2 threonine -- tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 1013

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/479 (9%), Positives = 127/479 (26%), Gaps = 35/479 (7%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 +I N++++ IR  Y    ++ + +P +   D L K           +F    ++
Sbjct: 554 WLPHGSKIYNKLIEFIRKEYRIRKYEEVISPNVFSCD-LWKTSGHYQNYKDCMFLFNVEN 612

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +W  ++                         ++   +R+       F    + ++    
Sbjct: 613 KEW-GMKPMNCPG-------------HCLMFKQLNVSYRSLPVRLADFGVLHRNEISGSL 658

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           S                     IK+   +       + +    K  L    +  + +  +
Sbjct: 659 SGLTRVRRFQQDDSHIFCSMEHIKQEVLNTLNFLFYVYNLFGFKYELFLSTRPKKFIGQI 718

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              +  ++     +     + + +       G  +     D +         +   +L  
Sbjct: 719 STWNLAEQHLKDALYAANVQWKINEGDGAFYGPKIDILVKDSLNRTHQCGTIQLDFQLPV 778

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                   ++         +  +    + N    ++  +   + +     E         
Sbjct: 779 RFNLQYKNKEYVTNNEKNEKNEKNHDNDDNVHNNNNYPINHDDLHNNEKKEFKDSQNHNE 838

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEM 375
           +K+   +  +       +      KG   P       +G     VA+    ++      +
Sbjct: 839 DKEHNNIHDNHSLKPNINEEGLLKKGFERPIIIHRAILGSVERFVAILIEHTAGKLPFWL 898

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
            P     +              + L       ++    +     +++ A  +     ++ 
Sbjct: 899 SPRQAIVLPIGDKYNDYANYVYETLHNNMFDVDLDTSVN-TLNKKIREAQLKQFNYILVV 957

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           G  E +   + ++D                 R+ +  Q    I EL++   K+L  N +
Sbjct: 958 GEKELTTNTVTLRD-----------------RDDQNNQHVYTIQELINKFNKLLDVNSK 999


>gi|85714214|ref|ZP_01045202.1| ATP phosphoribosyltransferase regulatory subunit [Nitrobacter sp.
           Nb-311A]
 gi|85698661|gb|EAQ36530.1| ATP phosphoribosyltransferase regulatory subunit [Nitrobacter sp.
           Nb-311A]
          Length = 430

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 3/95 (3%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           + + +   G+   E  +L+ ++       ++ R  K ++   D   + + LR DLT P+A
Sbjct: 58  LLSSFMQAGYIKAEPAILQPAEPFLDLSGEDIR--KSLYLTSDPGSEELCLRPDLTIPVA 115

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           R    +      P     +GPVFR        F Q
Sbjct: 116 RDYLASGKA-GKPAGFCYLGPVFRYRGGRSSEFPQ 149


>gi|289617913|emb|CBI55490.1| unnamed protein product [Sordaria macrospora]
          Length = 497

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/447 (9%), Positives = 113/447 (25%), Gaps = 71/447 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI NR+++ +R  Y +YGF  + TP + Y  +L       +     +F++
Sbjct: 73  GSPIFLPNGARIFNRLVEYLRKQYVHYGFQEVITPTI-YKKALWAKSGHLENYADDMFTV 131

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                                      +         +  + D 
Sbjct: 132 T------------------------------------------STSPSRADVTEAGEVDE 149

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  D+     +R  + G L  +        ++ 
Sbjct: 150 YGLKPMNCPGHCLIFAAQKRSYRDLPIRYADFSP--LHRNEISGALSGLTRVRRFHQDDG 207

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            I  R            +   L   R            L              +   S+ 
Sbjct: 208 HIFCR-----PNQIEDEISKTLEFIRRVYKDFRLGSYRLKLSTRPE-------NYMGSLE 255

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILG 312
           +                E   ++E           + +  +  +  +  T    ++    
Sbjct: 256 DWEHAEGSLKRALDTSGEPWTLNEGDGAFYGPKIDVILKDSDGKEHQTATIQLDFQLPKR 315

Query: 313 FPVMNEKQKPV--VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           F +  +   P     G          +    +   +             + ++       
Sbjct: 316 FELEYQAPAPELEAKGETTTDPELLAVSGPVRPVMIHRAVLGSAERMFALLIEHFNGKWP 375

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----------AGIRAEMFLGSSKNFGNQ 420
                   ++ T++     L   +   ++L            +G+  ++   S+++   +
Sbjct: 376 FWLNPRQAIVLTVNDSEPVLQFARKTQRVLLGTDSADSHVSPSGLAIDLD-DSARSLSLK 434

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQI 447
           ++ A  R   + I+ G  + + G + +
Sbjct: 435 IREAKTRGYGMVIVVGPKDVANGTVAV 461


>gi|163942310|ref|YP_001647194.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013779|ref|ZP_04170907.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229062260|ref|ZP_04199581.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229135411|ref|ZP_04264199.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|163864507|gb|ABY45566.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228648054|gb|EEL04101.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228716988|gb|EEL68669.1| Threonyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228747448|gb|EEL97323.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 645

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 91/337 (27%), Gaps = 23/337 (6%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M M   + +       +   +  N+      +  +I   G     
Sbjct: 311 TSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRY 370

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT------SEQIDIMVSFLS 245
           E    L  + ++    L    + +   +            L        E     +S+  
Sbjct: 371 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKDFGLENYSFRLSYRD 430

Query: 246 I-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +K   +     K     ++  +E+    +     G  +         VR       
Sbjct: 431 PADTKKYYADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDE 488

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +    L F +    +   V               + +   +     S     +   ++ 
Sbjct: 489 TLSTVQLDFLLPERFELTYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEE 538

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            + +           +  +      L   +     LR AGIR E+     K  G +++ A
Sbjct: 539 YKGAFPTWLAPVQAQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREA 596

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +  P  ++ G  E +   + ++    G++ S  I 
Sbjct: 597 QMQKIPYMLVVGDNEVTENGVNVR--KYGEQKSETIA 631



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L   +         +    G+F  
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVLGSRELYETS-GHWNHYRDGMFPS 325

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D + + LR             +         +YR  P+   E     R+  
Sbjct: 326 MEMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGTMHRYEM 372


>gi|84998192|ref|XP_953817.1| threonyl-tRNA synthetase [Theileria annulata]
 gi|65304814|emb|CAI73139.1| threonyl-tRNA synthetase, putative [Theileria annulata]
          Length = 743

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/457 (10%), Positives = 116/457 (25%), Gaps = 70/457 (15%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 +I NR+++ +R+ Y   G+  + TP +   D L K     D   + ++    +D
Sbjct: 350 WLPNGAKIYNRLVEFMRDNYRVRGYQEVITPNIFSCD-LWKQSGHYDNYKENMYLFNLED 408

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +W  ++             +         +Y+  P+   +     R             
Sbjct: 409 TEW-GMKPMNCPG-------HCLMFKHLFLSYKQLPLRLADFGVLHRNELTGSLSGLTRV 460

Query: 138 SSAETADAEMCM---MMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
              +  DA +      + D +  +       +   + R       +     G+D+L    
Sbjct: 461 RRFQQDDAHIFCTREQIMDEVLNILTFIGKVYSLFDFRYEFKLSTKPAKALGEDEL---- 516

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                         +  +  L E        +T      +     +   L   L++    
Sbjct: 517 -------------WEIAEKSLEEALNKTGTKWTMNPGDGAFYGPKIDVVLFDCLDREHQC 563

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
               +   +                       NR  I    +          + +I  F 
Sbjct: 564 GTIQLDFNLPIRFNLEYRDKSESSAENVRCGFNRPVIIHRAI----------FGSIERFV 613

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
            +  +Q            +   +       +               AL+  E        
Sbjct: 614 AIVLEQTKGKLPFWLSPNQLLFIPITDNHLDY--------------ALELYEKFNALGSN 659

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              +++              M    L   G   ++   S+     ++K+  ++      I
Sbjct: 660 TNYIIL-------------IMIINGL---GYNVDVD-KSNNTINKKIKFGQQQRWNYMGI 702

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            G  E     + ++     ++    + +     E++ 
Sbjct: 703 VGDREVETRTVSLRPRDSDEQNVISLDDLVKLFESQQ 739


>gi|241668765|ref|ZP_04756343.1| threonyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254877296|ref|ZP_05250006.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254843317|gb|EET21731.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 635

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/435 (11%), Positives = 113/435 (25%), Gaps = 87/435 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI   + D +R   + YG   I TPL+       K      +  + +F+ 
Sbjct: 261 GIAFWHDSGVRIWREVEDYMRASNKKYGCGEIRTPLIADFSLWEKS-GHASKYAENMFAT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + ++ +  ++R                                                V
Sbjct: 320 KSEN-RDFAIRP-----------------------------------------MNCPTCV 337

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       M    +          H  +  R                +    
Sbjct: 338 QVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLMRVRSFTQDDGHIFCAPEQVEEEVI 397

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG                 DFT    L  E          I  +++  
Sbjct: 398 LMVKQCFEVYKDFGFN---------------DFTVKIALRPENR--------IGNDETWD 434

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL+                 +   I R  +  T  +       
Sbjct: 435 KSEQMLKNALDANNVAYELLPGEG---AFYGPKIEFHLKDAIGRSWQCGTIQL------- 484

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D   ++     +           + + ++    +     
Sbjct: 485 --------DFSMPDRLGATYIDKNGNKQVPVMLHRAIVGSLERFIGMLIEHYAGNMPLW- 535

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M   +      Q   + L   GIRA++ L  ++  G +++       P  +
Sbjct: 536 -LTPVQVAVMGISNHQDEYCQKVFETLEKNGIRAKLDL-RNEKIGFKIREHTLLRVPYLV 593

Query: 434 IQGTGERSRGMLQIK 448
           I G  E+ + ++ ++
Sbjct: 594 ILGKSEQEQEIVTVR 608


>gi|228993303|ref|ZP_04153219.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766371|gb|EEM15014.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 643

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/337 (12%), Positives = 95/337 (28%), Gaps = 23/337 (6%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M M   + +       +   +  N+      +  +I   G     
Sbjct: 309 TSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRY 368

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT------SEQIDIMVSFLS 245
           E    L  + ++    L    + +   +            L        E     +S+  
Sbjct: 369 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKDFGLENYSFRLSYRD 428

Query: 246 IDLEKSMHELYELVKGTIAG-EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +  K  +   E+ +   +  ++  +E+    E     G  +         VR       
Sbjct: 429 PEDTKKYYADDEMWEKAQSMLKEAMDEM--GLEYYEAEGEAAFYGPKLDVQVRTALGKDE 486

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +    L F +    +   V          DG   R    +            +   ++ 
Sbjct: 487 TLSTVQLDFLLPERFELTYVGE--------DGKPHRPVVIHRGVVSTM--ERFVAFLIEE 536

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            + +         V +  +      L   +   + L+ AGIR E+     K  G +++ A
Sbjct: 537 YKGAFPTWLAPVQVQVIPVSPQV-HLDYAKKVQEDLQRAGIRVEVDTREEK-IGYKIREA 594

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +  P  ++ G  E +   + ++    G++ S  I 
Sbjct: 595 QMQKIPYMLVVGDNEVAENGVNVR--KYGEQKSETIA 629



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 60/220 (27%), Gaps = 9/220 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L   +         +    G+F  
Sbjct: 265 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVLGSRELYETS-GHWNHYRDGMFPS 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGTMHRYEMSGALSG 376

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA + +      E +  +  +  + +     L+    ++     +   + 
Sbjct: 377 LQRVRGMTLNDAHIFVRPDQIKEELK-RVVNLTLEVYKDFGLENYSFRLSYRDPEDTKKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                  +K      + +  +  E           G  L 
Sbjct: 436 YADDEMWEKAQSMLKEAMDEMGLEYYEAEGEAAFYGPKLD 475


>gi|229167201|ref|ZP_04294942.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228616239|gb|EEK73323.1| Threonyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 639

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +EL  ++   S   K  
Sbjct: 396 IEDEIKSVLAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAELALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AGIR E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPLWVAPVQVKVIPVS-NAVHVQYANEVADKLAQAGIRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E     + ++    G+E S  I+
Sbjct: 575 DIRDEK-LGYKIREAQMQKVPYVLVIGDKEMESEAVNVR--KYGEEKSEVIE 623



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 33/114 (28%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I   Y +  + TP +   +   K           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQELWEKS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDHKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|187930129|ref|YP_001900616.1| prolyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|226701322|sp|B2UCU9|SYP_RALPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187727019|gb|ACD28184.1| prolyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 574

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P+++  + L +     D+ 
Sbjct: 31  MIKKLGAGLYTYMPVGLRVIRKVEQIVREEMNAAGAVEVLMPVVQPGE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +   +D   +   ++    ++   +AR    ++  +       +             
Sbjct: 90  GDELLRFKDRHERDFVMQPTSEEVVTDIARTEIRSYKQLPVNFYQIQTKFRDERRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D      + +  +M        +  G
Sbjct: 150 MRGREFTMKDAYSFDRDAEGLKVSYQKMYDAYTRIFQRFG 189



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 33/113 (29%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  + +D       +       L  AGI   +     +  G  
Sbjct: 463 DARGIIWPASIAPFQVVICPVGYDRSDAVREEADRLHAELVAAGIDVMLD-DRGERPGAM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  ++ G      G L+ +        +    +  +  +AR+AQ
Sbjct: 522 FADWELIGVPFRVVVGDRGLKEGKLEFQGRRDEAATAVAPADVLATLKARLAQ 574


>gi|167749880|ref|ZP_02422007.1| hypothetical protein EUBSIR_00848 [Eubacterium siraeum DSM 15702]
 gi|167657192|gb|EDS01322.1| hypothetical protein EUBSIR_00848 [Eubacterium siraeum DSM 15702]
          Length = 639

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M                L+  GIR E+  G S+  G +++ A  +  P  +
Sbjct: 535 WLAPVQVELMPIADRHNEFTSKVAAELKKRGIRVEVD-GRSEKIGFKIREAQLQKIPYML 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E     + I+   +G   +  + +     E  + + TI
Sbjct: 594 VIGDKEVETENVSIRCRKRGDIGTMSVSDFCDMVEKEIREKTI 636



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R I+   G+  I TP++  +  L +     D   + +++ 
Sbjct: 262 GFPFFLPKGMTLKNTLIDYWRQIHTRDGYVEISTPIM-LNRQLWETSGHWDHYKENMYTT 320

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 321 VI-DDTEFAIKPMNCPG 336


>gi|15673189|ref|NP_267363.1| ATP phosphoribosyltransferase regulatory subunit [Lactococcus
           lactis subsp. lactis Il1403]
 gi|12724176|gb|AAK05305.1|AE006353_4 ATP phosphoribosyltransferase regulatory subunit [Lactococcus
           lactis subsp. lactis Il1403]
          Length = 286

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 120/327 (36%), Gaps = 43/327 (13%)

Query: 46  ETPLLEYSDSLGKFLPDEDRPNKG-VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
             P  EY+        +    N+  +F     +GQ I+LRYD T PL R  ++       
Sbjct: 1   MPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQSITLRYDFTLPLVRLYSQ--IKDST 58

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
             R    G +FR EK   GR  +  Q  ++  G SA+ ++ E+  +    +E +G+ +  
Sbjct: 59  SARYSYFGKIFRKEKRHKGRSTENYQIGIELFGESADKSELEILSLALQVIEQLGLNKTV 118

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
           + IG           +++    D        +L   D      L G+   + +       
Sbjct: 119 FEIGSA------KFFQRLCQLADGSTELLTELLLKKD------LSGLNAFIEKNNFSKEL 166

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY 284
                    + ++  + + ++   +  +   ++ +K          E      +++    
Sbjct: 167 RGLLKEIFITNELSRLENLVTNTKDDVLISSFDQLK----------EFSEKLSMIK---- 212

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
               I I   +V  ++YYT  +++A                  +  GGRYD L+S F  +
Sbjct: 213 ---PIIIDLGMVPKMDYYTDLMFKAYSSAANQ----------PILSGGRYDQLLSNF-QE 258

Query: 345 NVPATGFSIGISRLIVALKSLESSTNN 371
              A GF   +  ++ AL+  E   +N
Sbjct: 259 EAFAIGFCCHMDTILKALERQELEEDN 285


>gi|152967010|ref|YP_001362794.1| threonyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151361527|gb|ABS04530.1| threonyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 656

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 2/85 (2%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +  +      +   Q     LR AG+R E+     +    +++   ++  P 
Sbjct: 552 PPWLAPVQVVGIPVADAHVPHLQDVAAALRAAGVRVEVDDTDDR-MPKKIRTWTKQKIPF 610

Query: 432 AIIQGTGERSRGMLQIKDLAKGKEL 456
            +I G  +   G +  +    G + 
Sbjct: 611 LLIAGAEDVENGAVSFR-FRDGSQE 634


>gi|257465911|ref|ZP_05630222.1| threonyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917067|ref|ZP_07913307.1| threonine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313690942|gb|EFS27777.1| threonine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 637

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  +  + +     +     L+  GIRAE+    S++ G +++ A+ R   P
Sbjct: 532 PMWLAPVQVKVLTINDECAPYAKEVVAQLKAQGIRAELD-DRSESIGYKIREANGRYKIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           + +I G  E  +  + ++      + S E+ 
Sbjct: 591 MQVIIGKNEIEKREVNVRRFGSQAQESMELD 621



 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + +RN ++D  R  +E  G+  I+TP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMVLRNTLIDLWRAEHEKAGYVQIDTPIMLNRE-LWEISGHWFNYRENMYT 317


>gi|237736526|ref|ZP_04567007.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421568|gb|EEO36615.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 638

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 49/126 (38%), Gaps = 4/126 (3%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +    +      + + ++    +         V + T++   ++    +   +
Sbjct: 502 EKHRPVMIHRVVYGSIERFIGILIEHYAGAFPLWLAPTQVKVLTIN--DETKPYAEEICR 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            L   GIRAE+    +++ G +++ A+ +   P+ +I G  E     + I+     ++ S
Sbjct: 560 TLLERGIRAELD-DRAESIGYKIREANGKYKVPVQLIIGKNEVENREVNIRRRGSQEQTS 618

Query: 458 REIKNN 463
            ++   
Sbjct: 619 MKLDEF 624



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN +++  +  +   G+  I TP++   + L +         + +++ 
Sbjct: 261 GFPIFLPKGMAIRNTLINLWKREHTLAGYTEIMTPIMLNKE-LWETSGHWYNYRENMYTS 319

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 320 TI-DETEFAIKPMNCPG 335


>gi|269797927|ref|YP_003311827.1| prolyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094556|gb|ACZ24547.1| prolyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 572

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 42/166 (25%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G         +   +I   +R   +      I  P+L+ ++   K  
Sbjct: 26  MLRAGFMR-KTANGLYSFLPLGWKSIKKIEAIVREEMDRASAQEIMMPILQPAEI-WKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGP 113
              +     +  + D       L     ++   L +    ++  +          +R   
Sbjct: 84  GRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKNEINSYRQLPVNLYQIQSKFRDER 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F        D   +  + +   M           G
Sbjct: 144 RPRYGLMRSREFIMKDAYSFDIDEAGLDESYKSMYDAYTRIFTRCG 189



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 1/99 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     V++     D   ++  Q     L+ AG+   +     +  G + K AD 
Sbjct: 466 IWPRSIAPFEAVIVPINAKDEALMATSQTIYTALQNAGVDVLLDDRKDRA-GVKFKDADL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              PL I           ++I+    G+ L   I +   
Sbjct: 525 IGYPLRITVSKNTLENNEVEIQIRKSGEALPCAIDSVAD 563


>gi|257456688|ref|ZP_05621878.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257445881|gb|EEV20934.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 586

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 48/142 (33%), Gaps = 4/142 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +           + + ++    +          ++  +    +     +   
Sbjct: 448 NQKHQPVMLHRAALGSLERFIGILIEQFGGALPPWLSPVQAMVIPVAPVFN--EYAEQIA 505

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            +L  AG R +  + + +    +++    +  P  ++ G  E+    + ++ L KG++ +
Sbjct: 506 SVLTKAGFRVKADIDTDR-MNAKIRKYQEQKIPYQLVVGEKEKQSNSVTVR-LLKGEQKT 563

Query: 458 REIKNNESWREARVAQITIPIS 479
             +    ++ + +   + +   
Sbjct: 564 MSVDEFAAFLKLKTDTVAVSAE 585


>gi|172054921|ref|YP_001806248.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171701202|gb|ACB54182.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 644

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +          +     L+ AG R E+     +  G Q++ A+    P+  
Sbjct: 542 WLAPIQLRLLPVSEAQREYGEAVVATLKEAGYRVEIDCTGER-LGKQIRNAELEKIPVVA 600

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           I G  E     L I+   +G   + ++   +   +  +A  T
Sbjct: 601 IVGNKEVETQSLSIRTRQQGDIGTMDLTELKKSLDDAIANKT 642



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +R  I D  R  + + G++ + TP +   + L K     D   + +F  
Sbjct: 267 GLVFWHPRGATMRYLIEDYWRKAHLDGGYELLYTPHVANLE-LWKTSGHFDFYRENMFDS 325

Query: 74  QDDDGQWISLRYDLTA 89
            D + Q   ++     
Sbjct: 326 MDIEEQAYQIKPMNCP 341


>gi|67920215|ref|ZP_00513735.1| Threonyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501]
 gi|67857699|gb|EAM52938.1| Threonyl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501]
          Length = 642

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +      +   +     L+ AG R E+     +  G Q++ A+    P+  
Sbjct: 540 WLAPIQLRLLPVSEAQIEYGETVVATLKQAGYRVEIDCTGER-LGKQIRNAELEKIPVVA 598

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           I G  E     L I+     ++           +E+  + IT
Sbjct: 599 IVGKKEVETQTLSIR---TRQQGDIGTMTLTELKESFKSAIT 637



 Score = 38.7 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      +  ++R  I D  R  + + G++ + TP +   D L K     D   + +F 
Sbjct: 265 GLVFWHPRGAKMRYVIEDYWRKAHLDGGYELLYTPHVANLD-LWKTSGHFDFYRENMFD 322


>gi|330443967|ref|YP_004376953.1| threonyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807077|gb|AEB41250.1| threonyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 635

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/142 (8%), Positives = 39/142 (27%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + I + +++  + ++   G+  I+TP L     L +         + +++L
Sbjct: 256 GMPFFHPRGMIIWDALINFWKELHARAGYQQIKTPQLMN-QRLWEISGHWQNYKENMYTL 314

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D +  +++         Y   +  +                 +              
Sbjct: 315 T-LDEENYAIKPMNCPGCMLYYKTHLHSYKEFPLRVAEIGHVHRHEVSGALSGLMRVRAF 373

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +       ++     + L
Sbjct: 374 HQDDAHVFLTPEQVEEETLNIL 395



 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 33/102 (32%), Gaps = 3/102 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      L + ++  +           V + T+      + + +   Q  +  G+ 
Sbjct: 505 HRALFGSIERFLGILIEHFKGKFPLWISPEQVRLITVA--DRHIPRARELAQKWQNLGLV 562

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             +   +S++   +++ A        +  G  E +   L I+
Sbjct: 563 VTVD-DASESVSKKIRNAQTMQVNYMVTLGDQEVANNTLAIR 603


>gi|257452295|ref|ZP_05617594.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058838|ref|ZP_07923323.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684514|gb|EFS21349.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 637

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  +  + +     +     L+  GIRAE+    S++ G +++ A+ R   P
Sbjct: 532 PMWLAPVQVKVLTINDECAPYAKEVVAQLKEQGIRAELD-DRSESIGYKIREANGRYKIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           + +I G  E  +  + ++      + S E+ 
Sbjct: 591 MQVIIGKNEIEKREVNVRRFGSQAQESMELD 621



 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + +RN ++D  R  +E  G+  I+TP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMVLRNTLIDLWRAEHEKAGYVQIDTPIMLNRE-LWEISGHWFNYRENMYT 317


>gi|238922273|ref|YP_002935787.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238873945|gb|ACR73653.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 591

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/403 (11%), Positives = 112/403 (27%), Gaps = 30/403 (7%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +      ++    +  +K     +   +   V  V     +   +      +   A+ 
Sbjct: 205 MFLPKGYTVWQELENYIKDKERKLGYLHVMTPCVGTVNLYKTSGHWDHYKE--NMFPAME 262

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
           ++   + +   N      I         D       +           L+G++      +
Sbjct: 263 VEGESFVLRPMNCPHHMMIYANKMHSYKDLPIRIGEIAHDFRFEASGTLKGIERGRHFCQ 322

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK--GTIAGEKGFNELVVISE 277
            D +  F     + SE   ++        + ++ +   ++         K  ++  + + 
Sbjct: 323 ND-AHLFVTPEQIESEFAKVVDLIFETYKDFNITDYRCVLSLRDPEDKVKYHDDDEMWNN 381

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY--- 334
                    N I I  T   G   + G   +  +   + NE              ++   
Sbjct: 382 AENALRKVLNDIGIEYTEEIGEAAFYGPKLDVNVKPAIGNEYTLSTCQLDFCLPSKFNLT 441

Query: 335 --DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTM-DHDSDSLS 391
             D    R     +           +   L+  + +           I  + + D +  +
Sbjct: 442 YIDKDGQRKTPVVLHRAILGSLDRFMAYILEETKGNLPLWLAPVQATILPVKNEDEELNA 501

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                   L   GIR E+    ++  G +++ A  +  P  I+ G  E + G +  +   
Sbjct: 502 YAHGLYDYLADNGIRVEID-ERAEKLGYRVREAQVKKIPYLIVLGKNEAADGTVSYR--L 558

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
            G++ S                 T+   E V+ +K  +   K 
Sbjct: 559 HGEQKS----------------TTVSKDEFVAMLKDEIATKKN 585



 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/230 (10%), Positives = 60/230 (26%), Gaps = 9/230 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   +   + + I++     G+  + TP +   +   K     D   + +F 
Sbjct: 201 RGLPMFLPKGYTVWQELENYIKDKERKLGYLHVMTPCVGTVNLY-KTSGHWDHYKENMFP 259

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR             +         +Y+  P+   E     RF       
Sbjct: 260 AMEVEGESFVLRPMNCP-------HHMMIYANKMHSYKDLPIRIGEIAHDFRFEASGTL- 311

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                      +     +  + +E+   K  D          +      + L   +   +
Sbjct: 312 KGIERGRHFCQNDAHLFVTPEQIESEFAKVVDLIFETYKDFNITDYRCVLSLRDPEDKVK 371

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                   +  +    + +  +  E   +       G  L       + +
Sbjct: 372 YHDDDEMWNNAENALRKVLNDIGIEYTEEIGEAAFYGPKLDVNVKPAIGN 421


>gi|188580755|ref|YP_001924200.1| ATP phosphoribosyltransferase regulatory subunit
          [Methylobacterium populi BJ001]
 gi|179344253|gb|ACB79665.1| tRNA synthetase class II (G H P and S) [Methylobacterium populi
          BJ001]
          Length = 387

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 20 TKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
                   +   +   +   G+ P   P+L+  +   +   ++ R  + +F  QD  G 
Sbjct: 9  PSGAEALRHV--RLSAHFSACGYVPASPPVLQPVEPFLELSGEDIR--RRIFVTQDATGA 64

Query: 80 WISLRYDLTAPLAR 93
           + LR + T P+ R
Sbjct: 65 ELCLRPEFTIPVCR 78


>gi|34580554|ref|ZP_00142034.1| prolyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28261939|gb|EAA25443.1| prolyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 426

 Score = 59.9 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/459 (10%), Positives = 125/459 (27%), Gaps = 65/459 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I   +R      G   +  P ++ +    +     D  
Sbjct: 31  MIRQQAAGIYTWLPLGLKVLKNIEHIVRLNMNKAGALEVLMPCIQPAHLWMES-GRFDNY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            K +   QD        R+D T                                    F 
Sbjct: 90  GKEMLKFQD--------RHDNT----------------------------------LLFG 107

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              +  + ++      +  ++   +         +       +  R+ L        ++ 
Sbjct: 108 PTNEDMIMDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINE 167

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++ +     + +A        +   + L        + +   G NL+ E   ++    + 
Sbjct: 168 ENAVKTYNQMYKAY-------INAFRDLGVFVIPVIADNGPIGGNLSHE-FHVIAE--TG 217

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +      + ++++K     +    E+               + +++   +   E  +   
Sbjct: 218 ESTIYYDKKFKILKDNPDID--VEEIKSWYAAAE------EKYEVNKLPISEQEITSSKG 269

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            E    F + ++    V   ++     Y  L               +         +   
Sbjct: 270 IEVGHIFYIGSK--YSVNMNALINDE-YGKLTPIEMSSYGIGISRLVAAIIEANCDEKGI 326

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +++      LI    HDS  +    M  + L    I        ++  G++    D 
Sbjct: 327 IWPSSVAPFKVSLINLNIHDSKCVELADMAYKELSDKNIEVLYDDTEAR-PGSKFATHDL 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P  II G  + +  ++++KD   G     E+ +  S
Sbjct: 386 IGSPHQIIIGPKKAANNIVELKDRKSGVIEDIEVGSLMS 424


>gi|315123806|ref|YP_004065810.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017528|gb|ADT65621.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 457

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 43/95 (45%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 362 VGIVPIGEAHIAYAKEIQKELLELNIDSEVY-EKNESLSKKIRIAEKQKLPMILVLGDDE 420

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             +  + ++D    ++ +  +       + +++++
Sbjct: 421 VVKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 455


>gi|309783049|ref|ZP_07677768.1| proline--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308918157|gb|EFP63835.1| proline--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 574

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P+++  + L +     D+ 
Sbjct: 31  MIKKLGAGLYTYMPVGLRVIRKVEQIVREEMNAAGAVEVLMPVVQPGE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +   +D   +   ++    ++   +AR    ++  +       +             
Sbjct: 90  GDELLRFKDRHERDFVMQPTSEEVVTDIARTEIRSYKQLPVNFYQIQTKFRDERRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D      + +  +M        +  G
Sbjct: 150 MRGREFTMKDAYSFDRDAEGLKVSYQKMYDAYTRIFQRFG 189



 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 33/113 (29%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  + +D       +       L  AGI   +     +  G  
Sbjct: 463 DARGIIWPASIAPFQVVICPVGYDRSDAVREEADRLHAELVAAGIDVMLD-DRGERPGAM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  ++ G      G L+ +        +    +  +  +AR+AQ
Sbjct: 522 FADWELIGVPFRVVVGDRGLKEGKLEFQGRRDEAATAVAPADVLATLKARLAQ 574


>gi|222056447|ref|YP_002538809.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221565736|gb|ACM21708.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 645

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    + LS  Q     LR AG+R +     ++  G +++ A  +  P  +
Sbjct: 545 WLSPVQVVVLTVTDNQLSFAQQVYAELRAAGLRVQQDF-RNEKLGFKIREAQLQKIPYML 603

Query: 434 IQGTGERSRGMLQ 446
           + G  E   GM+ 
Sbjct: 604 VIGDKEVEAGMVT 616


>gi|329577159|gb|EGG58629.1| threonine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 412

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/463 (9%), Positives = 121/463 (26%), Gaps = 84/463 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 28  SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 86

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR             +         +YR  P+   E             
Sbjct: 87  PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAEL------------ 127

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      A + +  +   TL           I    ++ L+ ++    ++ D  + 
Sbjct: 128 -GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVA---VYADFNIT 183

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +    L   D  +            +   D++      A L +   ++ + +   + E +
Sbjct: 184 DYRFRLSYRDPNNT----------DKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAA 233

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +     V+   A         +  + +    ++   +                +   + 
Sbjct: 234 FYGPKLDVQVKTALGMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTME 293

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F     +     F +                  +                + L+     
Sbjct: 294 RFVAYLTEVYKGAFPTWLA----------PIQATIIPVSVEAHSEYAYEIKERLQ----- 338

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     Q LR      E+    ++  G +++ +  +  P 
Sbjct: 339 -------------------------AQGLR-----VEVD-DRNEKMGYKIRASQTQKVPY 367

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E     + ++     +     +++   + ++  A++
Sbjct: 368 QLVVGDKEMEDATVNVRRYGSKE---TSVEDLSIFIDSMAAEV 407


>gi|325963430|ref|YP_004241336.1| Ser-tRNA hydrolase; threonyl-tRNA synthetase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469517|gb|ADX73202.1| Ser-tRNA hydrolase; threonyl-tRNA synthetase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 669

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 2/82 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                L+ AGIRAE+   S + F  +++ A +   P  +
Sbjct: 568 WLAPVQVVGIPVAETFNEYMFDVVDQLKAAGIRAEVDTSSDR-FPKKIRTASKDKIPFVL 626

Query: 434 IQGTGERSRGMLQIKDLAKGKE 455
           I G  +   G +  +    G +
Sbjct: 627 IAGGDDAEAGAVSFR-FRDGSQ 647


>gi|256844949|ref|ZP_05550407.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256718508|gb|EEU32063.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 637

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 44/108 (40%), Gaps = 5/108 (4%)

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCPL 431
             + PV +  +  + + +   +     L   GIRAE+    ++  G +++ A+ +   P+
Sbjct: 533 MWLAPVQVKVLTLNDECIPYAKEIMDKLEELGIRAELD-DRNETIGYKIREANGKYKIPM 591

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
            +I G  E     + I+      + S+ +    ++    V + TI   
Sbjct: 592 QLIIGKNEVENKEVNIRRFGSKDQFSKPLNEFYTYV---VDEATIKFD 636



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + IRN ++D  R  +E  G+  +ETP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMIIRNVLIDLWRKEHEKAGYLQLETPIMLNKE-LWEISGHWFNYRENMYT 317


>gi|310640050|ref|YP_003944808.1| ser-tRNA(thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus
           polymyxa SC2]
 gi|309245000|gb|ADO54567.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus
           polymyxa SC2]
          Length = 637

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +R  + D  R+I   +G++ + TPL+   + L +     +   + ++  
Sbjct: 264 GMPFYLPKGMVVRTALEDYSRDIQRLHGYEEVRTPLMMN-NRLWEQSGHYEHYKENMY-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +L+             +         +YR  P+  +E     R       + 
Sbjct: 322 SEVDETTFALKPMNCPG-------HMLVFKNELHSYRDLPIRISEFGQVHRHELSGALNG 374

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 375 MMRVRTFCQDDAHIF 389



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 38/101 (37%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    + +       + L  AG+R E+    ++  G +++ A     P   
Sbjct: 537 WLAPVHAKLLPVSENYIETANEVQEALLKAGLRVEVD-TRNEKLGYKIREAQLEKVPYMF 595

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G  E++ G + ++   +G   S  I +        + + 
Sbjct: 596 VIGENEKTTGTVAVRKRGEGDLGSFSIADIVEKISTEIHEK 636


>gi|241664234|ref|YP_002982594.1| prolyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240866261|gb|ACS63922.1| prolyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 574

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P+++  + L +     D+ 
Sbjct: 31  MIKKLGAGLYTYMPVGLRVIRKVEQIVREEMNAAGAVEVLMPVVQPGE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +   +D   +   ++    ++   +AR    ++  +       +             
Sbjct: 90  GDELLRFKDRHERDFVMQPTSEEVVTDIARTEIRSYKQLPVNFYQIQTKFRDERRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D      + +  +M        +  G
Sbjct: 150 MRGREFTMKDAYSFDRDAEGLKLSYQKMYDAYTRIFQRFG 189



 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 34/113 (30%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  + +D  +    +       L  AGI   +     +  G  
Sbjct: 463 DARGIIWPASIAPFQVVICPVGYDRSNAVREEADRLHAELVAAGIDVMLD-DRGERPGAM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  ++ G      G L+ +        +    +  +  +AR+AQ
Sbjct: 522 FADWELIGVPFRVVVGDRGLKEGKLEFQGRRDEAATAVAPADVLATLKARLAQ 574


>gi|126735142|ref|ZP_01750888.1| prolyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126715697|gb|EBA12562.1| prolyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 446

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I + +       G   I+ P ++ +D L +     D  
Sbjct: 31  MIKQASAGIYSWLPLGFKVLRKIENIVHEEQARAGHIAIQMPTIQSAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            + +  ++D  G+ +       +L   + R    ++  +       +  
Sbjct: 90  GEEMLRIKDRGGRDMLFTPTAEELVTDIFRAHVNSYKDLPLTLYQIQWK 138


>gi|159037395|ref|YP_001536648.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157916230|gb|ABV97657.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 671

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D       +   LR AGIRA++  G  +    +++ A ++  P   
Sbjct: 562 WLAPVQVVGIPIREDHTEYLDGFVAGLRAAGIRAQVDAGDDR-MQKKIRTAQQQKIPFMA 620

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  + + G +  +    G + +                  +P++E VS V  ++    
Sbjct: 621 IAGDDDVAAGTVSFRY-RDGSQRNG-----------------VPVAEAVSHVLDVVNSRA 662

Query: 494 EE 495
            +
Sbjct: 663 NQ 664


>gi|167626332|ref|YP_001676832.1| threonyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189083609|sp|B0TY89|SYT_FRAP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167596333|gb|ABZ86331.1| threonyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 635

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/435 (11%), Positives = 113/435 (25%), Gaps = 87/435 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI   + D +R   + YG   I TPL+       K      +  + +F+ 
Sbjct: 261 GIAFWHDNGVRIWREVEDYMRASNKKYGCGEIRTPLIADFSLWEKS-GHASKYAENMFAT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + ++ +  ++R                                                V
Sbjct: 320 KSEN-RDFAIRP-----------------------------------------MNCPTCV 337

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       M    +          H  +  R                +    
Sbjct: 338 QVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLMRVRSFTQDDGHIFCAPEQVEEEVI 397

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG                 DFT    L  E          I  +++  
Sbjct: 398 LMVKQCFEVYKDFGFN---------------DFTVKIALRPENR--------IGNDETWD 434

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL+                 +   I R  +  T  +       
Sbjct: 435 KSEQMLKNALDANNVAYELLPGEG---AFYGPKIEFHLKDAIGRSWQCGTIQL------- 484

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D   ++     +           + + ++    +     
Sbjct: 485 --------DFSMPDRLGATYIDKNGNKQVPVMLHRAIVGSLERFIGMLIEHYAGNMPLW- 535

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M   +      Q   + L   GIRA++ L  ++  G +++       P  +
Sbjct: 536 -LTPVQVAVMGISNHQDEYCQKVFETLEKNGIRAKLDL-RNEKIGFKIREHTLLRVPYLV 593

Query: 434 IQGTGERSRGMLQIK 448
           I G  E+ + ++ ++
Sbjct: 594 ILGKSEQEQEIVTVR 608


>gi|227549046|ref|ZP_03979095.1| prolyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078900|gb|EEI16863.1| prolyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 604

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 56/180 (31%), Gaps = 26/180 (14%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNN 371
           E       G          ++     + VP  G        ++A+               
Sbjct: 444 ELGHIFQLGRKYTEAMDVQILDEGGKRAVPTMGSYGIGVSRMMAVVAEQRHDEKGLVWPV 503

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D+ +L   +     L  AG+          + G + K A+    P 
Sbjct: 504 AIAPYQVHVVVANKDAAALQAGEDIAGELDAAGLEVLFDDRPKTSPGVKFKDAELLGMPF 563

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            +I G    + G+++++ +  G+                   + +  +E+V+ V++++  
Sbjct: 564 IVILGRS-FAEGIVELR-IRGGE------------------TLEVASAEVVAKVRELVAA 603



 Score = 48.7 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 11/85 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R   +I   +R   +  G   +  P L   E  +   ++    D     +
Sbjct: 51  GVYSWLPLGLRTLRKIETVVREEMDAMGALELLFPALLPREPYEQTNRWTEYGD----DL 106

Query: 71  FSLQDDDGQWISLRY----DLTAPL 91
           F L+D  G  + L        T  +
Sbjct: 107 FRLKDRKGADMLLGPTHEEMFTVAV 131


>gi|154487350|ref|ZP_02028757.1| hypothetical protein BIFADO_01200 [Bifidobacterium adolescentis
           L2-32]
 gi|154083868|gb|EDN82913.1| hypothetical protein BIFADO_01200 [Bifidobacterium adolescentis
           L2-32]
          Length = 677

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/369 (11%), Positives = 94/369 (25%), Gaps = 31/369 (8%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G  ++ +        +    +     +       L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLQWYKDSMYPPMRLDEEKDENGNVIKQGFDYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T   G   K   L    +++        +                 ++ 
Sbjct: 417 EQMKDELKSLLTFVLG-LLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEVAKES 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             +LV               ++    I R  +  T    +     F +            
Sbjct: 476 GLDLVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYIAADGTHQRP 534

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 535 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 576

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +     Q +   L    +R E+ L   + FG +++ A +   P  +I G  + +   +  
Sbjct: 577 EFAPHLQKFIASLEEETVRCEIDLSDDR-FGKKIRNASKSKAPFILIVGEEDMNNNAVSF 635

Query: 448 KDLAKGKEL 456
           +    G +L
Sbjct: 636 R-FRDGSQL 643


>gi|46447649|ref|YP_009014.1| threonyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|73919812|sp|Q6M9L0|SYT_PARUW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46401290|emb|CAF24739.1| probable threonine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 650

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 45/149 (30%), Gaps = 3/149 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ E P G      K + + N+++  IR     + +  I+TP +   + L +        
Sbjct: 259 LKEEAP-GMPFIHPKGLIVWNQLVAYIRECLSRHDYIEIKTPTMMTKE-LWEISGHWGNY 316

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F  Q +D +  +++         Y   +  +                 +       
Sbjct: 317 RQNMFISQIED-RDFAIKPMNCPGCMLYYKSHTHSYRELPLRIAEIGNVHRYEPSGSLSG 375

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTL 155
            F         +      +++   +   L
Sbjct: 376 LFRVRSFHQDDAHIFMKPSDIQQEILGVL 404



 Score = 41.4 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 36/111 (32%), Gaps = 8/111 (7%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +       IT  D         +   +  + AG   ++   + ++   +++ A 
Sbjct: 534 GKFPLWLSPSQIRFITVADRHE---PYARELAKRFKNAGFHVDVD-STQESVSKKVRNAQ 589

Query: 426 RRNCPLAIIQGTGERSRGMLQIK---DLAKGK-ELSREIKNNESWREARVA 472
                  +  G  E       ++   ++  G+ ++   I+  E  ++ R +
Sbjct: 590 LAQFNYILTIGDQEVEHKTANLRTRDNVVHGEIQIDEFIQKLEIEKQQRQS 640


>gi|189424928|ref|YP_001952105.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421187|gb|ACD95585.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 646

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLA 432
            + PV    +    + +   Q   + LR+AGIR +  L + K NF   ++ A  +  P  
Sbjct: 546 WLAPVQAVVLTVTDNQIPYAQEVYKQLRSAGIRVQEDLRNEKLNFK--IREAQLQKIPYM 603

Query: 433 IIQGTGERSRGMLQ 446
           ++ G  E  +G + 
Sbjct: 604 LVIGDKEVEQGTVT 617


>gi|321312429|ref|YP_004204716.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291485328|dbj|BAI86403.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320018703|gb|ADV93689.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 643

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 76/236 (32%), Gaps = 9/236 (3%)

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++  +  D   S +      +     EK F++  + ++         + I        G
Sbjct: 406 RLIQDVYEDFGLSDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGHDYYEAEG 465

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-----SI 353
              + G   +  +   +  E+    V        R+D       G+            S 
Sbjct: 466 EAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVST 525

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               +   ++  + +           +  +   +  L   +   + L+  G+R E+    
Sbjct: 526 MERFVAFLIEEHKGALPTWLAPVQFQVIPVSP-AVHLDYAKKVQERLQREGLRVEVD-SR 583

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +  G +++ A  +  P  ++ G  E   G + ++    G++ S  I  +E  ++A
Sbjct: 584 DEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVR--KYGEQNSETISLDEFVKKA 637



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G++ + TP+L   +         D   +G+F  
Sbjct: 265 GLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTPVLGSKELYETS-GHWDHYQEGMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D + + LR             +         +YR  P+   E     R+  
Sbjct: 324 MEMDNETLVLRPMNCP-------HHMMIYKQDIHSYRELPIRIAELGTMHRYEM 370


>gi|196040031|ref|ZP_03107334.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029290|gb|EDX67894.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 639

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    +    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFKYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+
Sbjct: 575 DMRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSGVIE 623



 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/257 (10%), Positives = 67/257 (26%), Gaps = 15/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      K  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------KYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDKLWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFN 270
           ++ E        EK   
Sbjct: 490 QMPEKFDLNYIDEKNEK 506


>gi|301056082|ref|YP_003794293.1| threonyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378251|gb|ADK07155.1| threonyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 645

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/330 (9%), Positives = 84/330 (25%), Gaps = 9/330 (2%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M M   + +       +   +  N+      +  +I   G     
Sbjct: 311 TSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRY 370

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L  + ++    L    + +   +            L   +   + ++      + 
Sbjct: 371 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKDFGLENYSFRLSYRD 430

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +  +        EK    L    + +    Y +     ++     L+           
Sbjct: 431 PEDTKKYYADDEMWEKAQGMLKEAMDEMGLDYYEAEG--EAAFYGPKLDVQVRTALGKDE 488

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               +           +   G                +        +   ++  + +   
Sbjct: 489 TLSTVQLDFLLPERFELAYVGEDGKQHRPVVIHRGVVSTME---RFVAFLIEEYKGAFPT 545

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  +      L   +     LR AGIR E+     K  G +++ A  +  P 
Sbjct: 546 WLAPVQAQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREAQMQKIPY 603

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            ++ G  E +   + ++    G++ S  I 
Sbjct: 604 MLVVGDNEVTENGVNVR--KYGEQKSETIA 631



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 71/258 (27%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L   +         +    G+F  
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVLGSRELYETS-GHWNHYRDGMFPS 325

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 326 MEMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGTMHRYEMSGALSG 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA + +      E +  +  +  + +     L+    ++     +   + 
Sbjct: 379 LQRVRGMTLNDAHIFVRPDQIKEELK-RVVNLTLEVYKDFGLENYSFRLSYRDPEDTKKY 437

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +K      + +  +  +           G  L  +    +    ++   +   
Sbjct: 438 YADDEMWEKAQGMLKEAMDEMGLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLDF 497

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  +    GE G   
Sbjct: 498 LLPERFELAYVGEDGKQH 515


>gi|15807075|ref|NP_295804.1| threonyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|22654147|sp|Q9RSP3|SYT_DEIRA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6459875|gb|AAF11630.1|AE002044_3 threonyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 649

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 51/150 (34%), Gaps = 18/150 (12%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +   +    F        + ++              V+I  +    ++ ++     +
Sbjct: 513 QEHRPIMIHRAPFGSIERFTGILIEHYAGDFPLWLAPRQVMIIPIADRHNAYAE--ELRE 570

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L  AG+RAE+   S++    +++ A+    P+ +I G  E+    + +++   G+    
Sbjct: 571 ELHRAGLRAEVDDSSNR-MQAKVRDAELHKIPVMLIVGDKEQEAREVSVRE-RTGE---- 624

Query: 459 EIKNNESWREARVAQITIPISELVSTVKKI 488
                         +  +   EL + + + 
Sbjct: 625 ----------GTKERKGVKFDELKAELLER 644



 Score = 40.6 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 2/111 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G          +R  + + ++      G+  + TP +   D   +        ++  F+
Sbjct: 267 KGLPLWLPNGTVLREELTNFMKEQQFQRGYQGVVTPNIGNLDLY-RTSGHYPYYSESQFN 325

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGP 122
               D +   L+        R  A    +    P R    G V+R E+ G 
Sbjct: 326 PIQVDEEEYMLKPMNCPHHVRIYASKPRSYRDLPVRLAEFGTVYRYEQSGE 376


>gi|325120065|emb|CBZ55617.1| hypothetical protein NCLIV_060420 [Neospora caninum Liverpool]
          Length = 781

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/454 (8%), Positives = 102/454 (22%), Gaps = 49/454 (10%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ N++   +R  Y   GF  + +P +   D L K         + ++   D +
Sbjct: 357 WLPDGAKVYNKLCAFMREEYRFRGFQEVISPNIFSCD-LWKMSGHYQNYKENMYLF-DVE 414

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G+   L+                          + P +R        F    + ++    
Sbjct: 415 GKEWGLKPMNCPG-------------HCIMFKHLAPSYRQLPLRLADFGVLHRNELSGSL 461

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     +K+           + D       L    +  + L   
Sbjct: 462 TGLTRVRRFQQDDAHIFCRMDQVKQEVADALNFLFFVYDQFGFSFELFLSTRPKKALGDR 521

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D  +      +K  L E       +   GA    +    +   L             
Sbjct: 522 SLWDAAEG----ALKEALEETGRPWQLNPGDGAFYGPKIDIRLWDALKRP---------- 567

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                                ++       R  +           +    +         
Sbjct: 568 ----------------HQCGTIQLDFQLPIRFNLQYRTQDEAVAASREKAKDEKSEKRTE 611

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
              +P        G          +   +             V ++              
Sbjct: 612 NGDEPEATKEEEFGVEQPLRPGMARPVIIHRAILGSIERMCAVVIEHTGGKLPFWLSPRQ 671

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
                +               +L + G    + + ++     +++ A  +     ++ G 
Sbjct: 672 C--IVLPISDKVNDYATSVRDVLHSCGYEVGLDVSNN-TVNKKIREAQLQQWNYLLVVGE 728

Query: 438 GERSRGMLQIKDLAKGK-ELSREIKNNESWREAR 470
            ER+   + ++D A  + +    +++     E +
Sbjct: 729 KERADKTVTVRDRADPEHQHVLSMEDLLQLFEKQ 762


>gi|297626431|ref|YP_003688194.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922196|emb|CBL56764.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 680

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 40/116 (34%), Gaps = 19/116 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    +           LR  G+R E+     +    +++ A R+  P  +
Sbjct: 566 WLSPVQVVGIPVAGEFNGYLDTIATRLREKGVRVEVDESDDR-MQKKIRNATRQKVPFML 624

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
           I G  +R    +  +    G +L+                  +PI + +  + + +
Sbjct: 625 IAGEKDREAQAVSFR-FRDGSQLNG-----------------VPIDDAIDRIVEHI 662



 Score = 37.9 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 19/47 (40%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R+ I   I   + + GFD ++TP++   D      
Sbjct: 276 GLVVFHPKGGILRHEIESYITKRHIDAGFDLVDTPIISKGDLFHTSG 322


>gi|228994292|ref|ZP_04154183.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228765442|gb|EEM14105.1| Threonyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 641

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 71/258 (27%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN +   +R I +NY +  + TP++     L +     D     ++  
Sbjct: 265 GMPFYLPKGQIVRNELESFLREIQQNYDYQEVRTPIMMN-QGLWEESGHWDHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLIFKNKLHSYRDLPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +        +        I    R        ++    +D + + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIESEIKSVLKQ--IDYVYRTFGFEYEVELSTRPEDSMGDD 433

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            +  +A   L       +K L    R +       G  +     D +         +   
Sbjct: 434 ELWNQAESSL----ENVLKSLNYNYRVNEGDGAFYGPKIDFHIKDALQRSHQCGTVQLDF 489

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E        E+    
Sbjct: 490 QMPEKFDLNYIDERNEKR 507



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/359 (10%), Positives = 94/359 (26%), Gaps = 12/359 (3%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
           +            F  E      +++        + +     ++       D +    + 
Sbjct: 270 LPKGQIVRNELESFLREIQQNYDYQEVRT---PIMMNQGLWEESGHWDHYKDNMYFSEVD 326

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
              + +   N      I +       D         +         L G+  +      D
Sbjct: 327 NKSFALKPMNCPGHMLIFKNKLHSYRDLPIRMCEFGQVHRHEFSGALNGLLRVRT-FCQD 385

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     + SE   ++     +          E +        G +EL   +E   +
Sbjct: 386 DAHLFVTPEQIESEIKSVLKQIDYVYRTFGFEYEVE-LSTRPEDSMGDDELWNQAESSLE 444

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLV 338
           +   S           G  Y     +         ++                   D   
Sbjct: 445 NVLKSLNYNYRVNEGDGAFYGPKIDFHIKDALQRSHQCGTVQLDFQMPEKFDLNYIDERN 504

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +           L + ++    +         + +  + +        +   +
Sbjct: 505 EKRRPVVIHRAVLGSFDRFLGILIEHFGGAFPTWLAPVQIKVIPVSNQV-HEQYTKEIEE 563

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            L++ G+RAE    S K  G +++ A  +  P  ++ G  E   G + ++    G+E S
Sbjct: 564 KLKSVGLRAERDARSEK-LGYKIREAQLQKIPYILVIGDKEMENGSVNVR--KYGEEKS 619


>gi|311739686|ref|ZP_07713521.1| proline--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305502|gb|EFQ81570.1| proline--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 589

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/179 (11%), Positives = 54/179 (30%), Gaps = 26/179 (14%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG- 376
           E       G          ++     + VP  G        ++A+ + +   +       
Sbjct: 430 ELGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGIGITRMLAVLAEQRHDDKGLNWPV 489

Query: 377 -----PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D+ ++       + L   G+          + G + K A+    P 
Sbjct: 490 AVAPYQVHVAVANKDAAAMEAGDKLVEELSAKGLEVLFDDRPKVSPGVKFKDAELLGMPF 549

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
             I G      G ++++ +  G+                   + +P  ++V  + ++++
Sbjct: 550 VAILG-RAFKEGKIELR-IRGGE------------------TLEVPAEDIVDKILELVR 588



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R   +I D +R   +  G   +  P L   E  +   +++   D     +
Sbjct: 40  GVYTWLPLGLRTLRKIEDVVRQEMDAIGGQEMLFPALLPREPYEKTNRWVEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D     + L  
Sbjct: 96  FRLKDRKNADMLLGP 110


>gi|212697111|ref|ZP_03305239.1| hypothetical protein ANHYDRO_01677 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675886|gb|EEB35493.1| hypothetical protein ANHYDRO_01677 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 447

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +R+ N+I + +R   E Y    + T +L+  D   K           +F 
Sbjct: 30  SGVYSYLPLGMRVINKIENIVRKSMEKYDSIEVSTSVLQSKDIWEKS-GRWQNFGPEMFK 88

Query: 73  LQDDDGQWISLRY 85
           ++D   +   L  
Sbjct: 89  IKDRHDREYCLGP 101


>gi|332797142|ref|YP_004458642.1| threonyl-tRNA synthetase editing domain-containing protein
           [Acidianus hospitalis W1]
 gi|332694877|gb|AEE94344.1| threonyl-tRNA synthetase editing domain protein [Acidianus
           hospitalis W1]
          Length = 385

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 1/116 (0%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I  +++  KS+ ++      + P+ +  +    D L K + +   L + G+R E+     
Sbjct: 256 IYYILLQAKSMSTTPYLPLWISPIHVRLLPVKKDFLEKTEEFANQLLSKGVRVEIDNKDD 315

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              GN+++ +     P   I G  E     L ++   K ++ S  +    +  +  
Sbjct: 316 G-LGNKIRRSGMDWIPYVAIVGEREIKTSTLTVRIRKKDEQKSLTVDELYALIKDE 370


>gi|310287485|ref|YP_003938743.1| threonyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251421|gb|ADO53169.1| threonyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 676

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/408 (10%), Positives = 108/408 (26%), Gaps = 50/408 (12%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDADGNITKPGADYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   L+   +++           S  +  + V      E+ 
Sbjct: 417 EQMKDELTSLLTFVL-NLLKDFGLSDFYLEL-----------STKDPDKYVGSDEIWEEA 464

Query: 269 FNELVVISE--LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
              L  ++E   +               I        G  ++        N  ++     
Sbjct: 465 TRTLREVAEASHLDLVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPER----- 519

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                       +  +   +    F        V L+    +      + PV +  +   
Sbjct: 520 --FQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVA 575

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +       + + L    +R E+     + FG +++ A +   P  +I G  + +   + 
Sbjct: 576 DEFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVS 634

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
            +    G +L+                  +P+ E    +  ++++  +
Sbjct: 635 FR-FRDGSQLNG-----------------VPVDEAREKILAVIKKRAQ 664


>gi|251772034|gb|EES52606.1| threonyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 587

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  RIR  I +  +  ++ +G+  + TP +   D L K     D   + +FS 
Sbjct: 209 GMVLWLPRGARIRRVIEEIWKTRHDRHGYQYVYTPHIARLD-LWKQSGHWDFYRESMFSP 267

Query: 74  QDDDGQWISLRYDLTA 89
            + +G    L+     
Sbjct: 268 MEIEGSEFELKPMNCP 283



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 24/71 (33%), Gaps = 1/71 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +T +      +   +   + L   G+R       ++  G +++ A     P   + G  
Sbjct: 489 QVTILPIADRHIPYARKIAETLEQEGVRVVTDF-RNEKIGAKIRDAQLMKIPQMWVLGDR 547

Query: 439 ERSRGMLQIKD 449
           E     + I+ 
Sbjct: 548 EAQDETISIRH 558


>gi|262202081|ref|YP_003273289.1| prolyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085428|gb|ACY21396.1| prolyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 576

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 2/100 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +   + D  +++      + L  AG+   +      + G + K
Sbjct: 468 DDKGLRWPREVAPFAVHLVIANKDDAAVTGAGELAEDLDAAGVSVLLD-DRKASPGVKFK 526

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            A+    P  ++ G    + G ++I+D   G+     + +
Sbjct: 527 DAELLGMPTVVVVG-RGYANGTIEIRDRFTGETTEVAVDS 565



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+   I + +R   +  G   I  P L   D               +F L
Sbjct: 36  GVYTWLPLGLRVLKAIENVVREEMDAIGAQEILLPALLPRDPYET-TGRWTEYGDALFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGADMLLGP 106


>gi|220912797|ref|YP_002488106.1| threonyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|254783507|sp|B8H9E8|SYT_ARTCA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219859675|gb|ACL40017.1| threonyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 669

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 2/82 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                L+ AGIRAE+   S + F  +++ A +   P  +
Sbjct: 568 WLAPVQVVGIPVAETFNEYMFDVVDQLKAAGIRAEVDTSSDR-FPKKIRTASKDKIPFVL 626

Query: 434 IQGTGERSRGMLQIKDLAKGKE 455
           I G  +   G +  +    G +
Sbjct: 627 IAGGDDAEAGAVSFR-FRDGSQ 647


>gi|189197599|ref|XP_001935137.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187981085|gb|EDU47711.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 542

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/484 (10%), Positives = 119/484 (24%), Gaps = 81/484 (16%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  ++   +R  Y  +GF  + TP++ Y  SL +     +   + +FS+
Sbjct: 91  GSPLILPNGAYVFQKLQSFLRAQYPQFGFQEVITPII-YKKSLWEKSGHWENYAEDMFSV 149

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q             TA +                          E    G          
Sbjct: 150 QGRG---------TTAQI--------------------PEAEGGEDGEFGLKPMNCPGHC 180

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                  ++       +   +                 R+                    
Sbjct: 181 LLFRDEIKSYRDLPVRLADFSALHRNEISGALTGLTRVRRFHQDDAHIFCRPDQILAEIE 240

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
             +         FGL   KLLL     DN     +  +   EQ+   ++ +  +   +  
Sbjct: 241 QTLKFVAMVYRTFGLGPYKLLLSTRPKDNFIGTVEEWDRAEEQLTTALNNIGSEWAINEG 300

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +            K  N     +  ++       R  +                      
Sbjct: 301 DGAFYGPKIDIILKDSNGKEHQTATIQLDFQLPQRFDLQYQASP---------------- 344

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                 ++             D  + R    +    G       + + ++          
Sbjct: 345 ------EELEAGSQTSMDAGLDPTLRRPVIVHRAIYGS--IERFMALLIEHYVGKYPFWL 396

Query: 374 EMGPVLITTMDHDSDSLSK---YQMYTQMLRTAG-------------------IRAEMFL 411
              P +I +++++++ L      Q     L+ A                    +  ++  
Sbjct: 397 SPRPAIILSLNNNAEVLEHVSRVQSVLSGLKAADPPSQVSTSSPKPLPLSTIQLPVDVD- 455

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            SS+    ++  A  +     I+ G  E   G +   ++    + + E       +EAR 
Sbjct: 456 TSSRPLAKKIAEARSKKYNHIIVVGGNEVQTGSV---NMQVVNQPNPE-ATFRELQEARG 511

Query: 472 AQIT 475
            ++T
Sbjct: 512 TEVT 515


>gi|126658692|ref|ZP_01729837.1| Threonyl-tRNA synthetase, class IIa [Cyanothece sp. CCY0110]
 gi|126619954|gb|EAZ90678.1| Threonyl-tRNA synthetase, class IIa [Cyanothece sp. CCY0110]
          Length = 642

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 34/96 (35%), Gaps = 4/96 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +          +     L+ AG R E+     +  G Q++ A+    P+  
Sbjct: 540 WLAPIQLRLLPVSEAQREYGETVVATLKEAGYRVEIDCTGER-LGKQIRKAELEKIPVVA 598

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           I G  E     L I+     ++      +    +++
Sbjct: 599 IVGNKEVETQSLSIR---TRQQGDIGTMDLTELKKS 631



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +R  I D  R  + + G++ + TP +   + L K     D   + +F  
Sbjct: 265 GLVFWHPRGATMRYIIEDYWRKAHLDGGYELLYTPHVANLE-LWKTSGHFDFYRENMFDS 323

Query: 74  QDDDGQWISLRYDLTA 89
            D + Q   ++     
Sbjct: 324 MDIEEQAYQIKPMNCP 339


>gi|332797162|ref|YP_004458662.1| threonyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694897|gb|AEE94364.1| threonyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 542

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 47/156 (30%), Gaps = 21/156 (13%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D   S+ +   V    +      L + L+  +           V I  ++   +     +
Sbjct: 394 DKDGSKKRPVMVHRAIYGSIDRFLAILLEHFKGKLPTWLSPIQVRILPIN--PEVREYAE 451

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                L +  IRAE+     +    ++K A     P  +I G  E     + I+      
Sbjct: 452 KVLSKLVSVKIRAEID-SEEETLSKRIKKAYDDGVPYILIIGKKEAESNSVTIR------ 504

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                           +    +P+ + V  + K +Q
Sbjct: 505 ------------ARGNIEVKGVPLDKCVDAISKEIQ 528



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN ++D ++ I  + G+  + T  + Y   L K     +     +   
Sbjct: 155 GLVLYHPKGQIIRNELIDYMKEINASMGYQEVYTTHV-YRTILWKISGHYEMYKDKMLIF 213

Query: 74  QDDDGQWISLRYDLTA 89
              D + + ++     
Sbjct: 214 T-HDDEELGIKPMNCP 228


>gi|329927796|ref|ZP_08281857.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328938197|gb|EGG34592.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 636

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/384 (11%), Positives = 98/384 (25%), Gaps = 15/384 (3%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           +   N   I      +  G  F  +           +   +  G      D      + +
Sbjct: 265 FFLPNGMIIRNELEQFARGLQFHRDYDEVRTPLMMNKRLWEMSGHWDHYKDNMYFTQVDE 324

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
           T  A+       H+ +    +             +         +         L G+  
Sbjct: 325 TEYALKPMNCPGHMLVYKNSLH---------SYRELPIRISEFGQVHRHEFSGALNGMMR 375

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
           +    + D         +   E+I  ++ F+S   +    E    +        G  EL 
Sbjct: 376 VRTFCQDDAH--IFVRPDQIQEEIKQVIDFISQVYQVFGFEYTIELSTRPEDSMGSEELW 433

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGG 331
             +E   +   +   +        G  Y     +  +       +    +          
Sbjct: 434 EQAESSLQQVLDQMGLPYRINEGDGAFYGPKIDFHILDSLKRSWQCGTIQLDFQFPEKFD 493

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
             Y G  ++     V        I R I  L         +  + PV +  +      + 
Sbjct: 494 LSYIGEDNQKHRPVVIHRAVFGSIERFIGILTEHYGGAFPMW-LAPVQVMIIPVSDHYID 552

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 + L  AGIR  + +  ++  G +++ A     P  ++ G  E     + ++   
Sbjct: 553 YSLKVKKRLENAGIRVNVDV-RNEKLGYKIREAGLLKTPYTLVLGEKEMDSDHVSVRKRG 611

Query: 452 KGKELSREIKNNESWREARVAQIT 475
           +G+     I          +    
Sbjct: 612 EGELGEIAIDQVIERLRNEIESKE 635



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 68/259 (26%), Gaps = 17/259 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNI-YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G        + IRN +    R + +    +D + TPL+     L +     D     ++ 
Sbjct: 262 GMPFFLPNGMIIRNELEQFARGLQFHR-DYDEVRTPLMMNKR-LWEMSGHWDHYKDNMY- 318

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
               D    +L+             +         +YR  P+  +E     R       +
Sbjct: 319 FTQVDETEYALKPMNCPG-------HMLVYKNSLHSYRELPIRISEFGQVHRHEFSGALN 371

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +       D     +  D ++    +  D+   +      +  +E      D   +E
Sbjct: 372 -GMMRVRTFCQDDAHIFVRPDQIQEEIKQVIDFISQVYQVFGFEYTIELSTRPEDSMGSE 430

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L               G+   + EG          G  +    +D +         +  
Sbjct: 431 ELWEQAESSLQQVLDQMGLPYRINEGDG-----AFYGPKIDFHILDSLKRSWQCGTIQLD 485

Query: 253 HELYELVKGTIAGEKGFNE 271
            +  E    +  GE     
Sbjct: 486 FQFPEKFDLSYIGEDNQKH 504


>gi|309800860|ref|ZP_07694992.1| threonine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|308222396|gb|EFO78676.1| threonine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 677

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/404 (11%), Positives = 104/404 (25%), Gaps = 48/404 (11%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +        +    +     +       L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGFDYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T   G   K   L    +++        +                 ++ 
Sbjct: 417 EQMKDELKNLLTFVLG-LLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEVAKES 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +            
Sbjct: 476 GLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYIAADGTHQRP 534

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 535 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 576

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +     Q +   L    +R E+ +   + FG +++ A +   P  +I G  + +   +  
Sbjct: 577 EFAPHLQRFIASLEEETVRCEIDMSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSF 635

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +    G +L+                  +P+ E  + +  +L++
Sbjct: 636 R-FRDGSQLNG-----------------VPVDEAKNQIMTVLRK 661


>gi|323490461|ref|ZP_08095668.1| threonyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395865|gb|EGA88704.1| threonyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 642

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 62/443 (13%), Positives = 128/443 (28%), Gaps = 83/443 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   IR  I   I +  E  G+D + TP++   +   K     D   + +F +   D
Sbjct: 269 WLPKGATIRRIIERYIVDKEERLGYDHVYTPVMGSVELY-KTSGHWDHYQEDMFPVMKMD 327

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + + LR             +         +YR  PV   E     R+            
Sbjct: 328 NEELVLRPMNCP-------HHMMIFKQGIHSYRQMPVRIAELGLMHRYEMS--------- 371

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A + +  +   TL    +      I    +++++ I+E      D  +N+    L
Sbjct: 372 ----GALSGLQRVRGMTLNDAHLFVRPDQIKEEFKRVVNLIVEVYK---DFNINDYSFRL 424

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D               +   D++      A L     ++ V ++ ++ E + +    
Sbjct: 425 SYRDP----------EDKEKYFDDDAMWNRAQAMLKEAMDELDVDYIEVEGEAAFYGPKV 474

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            V+   A  K      V  + +    ++ + I       R +  +               
Sbjct: 475 DVQVKTALGKEETLSTVQLDFLLPERFDLSYIGEDGKQHRPVVIHR-------------- 520

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
                   G V    R+   +        P     + +  + V+L +  + T  ++E   
Sbjct: 521 --------GVVSTMERFVAFLIEEYKGAFPTWLAPVQVELIPVSLDAHSAYTKELQEKLQ 572

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
                +D D              R A                Q++       P  ++ G 
Sbjct: 573 SHKIRVDIDERDEKLGYKI----REA----------------QMQK-----VPYMLVLGD 607

Query: 438 GERSRGMLQIKDLAKGKELSREI 460
            E   G + ++    G++ S  +
Sbjct: 608 KELEDGSVNVR--KYGEQKSESM 628


>gi|192359534|ref|YP_001982928.1| prolyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685699|gb|ACE83377.1| prolyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 611

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 8/79 (10%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     +R+  ++   +R      G   +  P+++ ++ L +      + 
Sbjct: 67  MIRKMASGLYNWLPLGLRVLRKVETIVREEMNKSGAMEVLMPVVQPAE-LWEESGRWQQY 125

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   L  
Sbjct: 126 GPELLRITDRHDRPFCLGP 144



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 29/92 (31%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M       +K +     L  AG+   +        G  L   D    P  I+ G    
Sbjct: 519 INMAKSEAVATKCEELYAQLSAAGLDVLLMDEDKARLGVMLADTDLMGIPHRIVVGDRGL 578

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G ++ K     ++    + +   + +A+V 
Sbjct: 579 EAGSIEYKGRRDAEKQEIAVGDIVEFLKAQVK 610


>gi|333024111|ref|ZP_08452175.1| putative prolyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332743963|gb|EGJ74404.1| putative prolyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 563

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 49/134 (36%), Gaps = 5/134 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
           + D L    K   V    + IG+SR + AL      +       E+ P  +  +      
Sbjct: 424 QLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLCWPAEVAPADVHVVAAGKVL 483

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++        L  AG R  +   +  + G +   A+    P  +I G    + G++++K
Sbjct: 484 QTELALEIADKLAAAGARVLVDDRAGVSPGVKFTDAELIGVPKTVIAGRRS-AEGIVELK 542

Query: 449 DLAKGKELSREIKN 462
           D   G+     ++ 
Sbjct: 543 DRRTGEREELSVEE 556



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ + I   +R   +  G   +  P L   +         +     +F L+D  
Sbjct: 46  WLPLGKKVLDNISQIVREEMDAIGAQEVLLPALLPREPYEAS-GRWEEYGDLLFRLKDRK 104

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 105 GADYLLGP 112


>gi|283456070|ref|YP_003360634.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283102704|gb|ADB09810.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 677

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/404 (11%), Positives = 104/404 (25%), Gaps = 48/404 (11%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +        +    +     +       L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMRLDEEKDENGNIIKQGFDYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T   G   K   L    +++        +                 ++ 
Sbjct: 417 EQMKDELKNLLTFVLG-LLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEVAKES 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +            
Sbjct: 476 GLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYIAADGTHQRP 534

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 535 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 576

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +     Q +   L    +R E+ +   + FG +++ A +   P  +I G  + +   +  
Sbjct: 577 EFAPHLQRFIASLEEETVRCEIDMSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSF 635

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +    G +L+                  +P+ E  + +  +L++
Sbjct: 636 R-FRDGSQLNG-----------------VPVDEAKNQIMTVLRK 661


>gi|213963363|ref|ZP_03391619.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213954031|gb|EEB65357.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 647

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 35/111 (31%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +              +       +  Q   
Sbjct: 508 NEMHRPVMIHRAPFGSMERFVAILLEHTAGNFPLWLNPNQA--IILSLSEKYENYAQKVL 565

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +L  + IR  +    ++  G +++ A+ +  P  +I G  E   G + ++
Sbjct: 566 SLLENSDIRTLID-NRAETMGKKIREAETQKIPYMLIVGENEEKEGTVSVR 615



 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 53/175 (30%), Gaps = 10/175 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R R+   +R   +  G++ + TP + + +         D+  K  F  
Sbjct: 261 GLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIGHKNLYVTS-GHWDKYGKDSFQP 319

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR------ 124
               ++G+   L+             +  +    P R    G V+R E+ G         
Sbjct: 320 IATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPKRFAEFGTVYRYEQSGELHGLTRVR 379

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                   +       +     +  ++     ++G       + + + + L   +
Sbjct: 380 CFTQDDAHIFCTPEQLDDEFKHVIDLVLYVFGSLGFDNFTAQVSLRDPENLSKYI 434


>gi|261406470|ref|YP_003242711.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282933|gb|ACX64904.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 636

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/384 (11%), Positives = 98/384 (25%), Gaps = 15/384 (3%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           +   N   I      +  G  F  +           +   +  G      D      + +
Sbjct: 265 FFLPNGMIIRNELEQFARGLQFHRDYDEVRTPLMMNKRLWEMSGHWDHYKDNMYFTQVDE 324

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
           T  A+       H+ +    +             +         +         L G+  
Sbjct: 325 TEYALKPMNCPGHMLVYKNSLH---------SYRELPIRISEFGQVHRHEFSGALNGMMR 375

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
           +    + D         +   E+I  ++ F+S   +    E    +        G  EL 
Sbjct: 376 VRTFCQDDAH--IFVRPDQIQEEIKQVIDFISRVYQVFGFEYTIELSTRPEDSMGSEELW 433

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGG 331
             +E   +   +   +        G  Y     +  +       +    +          
Sbjct: 434 EQAETSLQQVLDQLGLPYRINEGDGAFYGPKIDFHILDSLKRSWQCGTIQLDFQFPEKFD 493

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
             Y G  ++     V        I R I  L         +  + PV +  +      + 
Sbjct: 494 LSYIGEDNQKHRPVVIHRAVFGSIERFIGILTEHYGGAFPMW-LAPVQVMIIPVSDHYID 552

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 + L  AGIR  + +  ++  G +++ A     P  ++ G  E     + ++   
Sbjct: 553 YSLKVKKRLENAGIRVNVDV-RNEKLGYKIREAGLLKTPYTLVLGEKEMDSDHVSVRKRG 611

Query: 452 KGKELSREIKNNESWREARVAQIT 475
           +G+     I          +    
Sbjct: 612 EGELGEIAIDQVIERLRNEIESKE 635



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 73/260 (28%), Gaps = 19/260 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNI-YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G        + IRN +    R + +    +D + TPL+     L +     D     ++ 
Sbjct: 262 GMPFFLPNGMIIRNELEQFARGLQFHR-DYDEVRTPLMMNKR-LWEMSGHWDHYKDNMY- 318

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
               D    +L+             +         +YR  P+  +E     R       +
Sbjct: 319 FTQVDETEYALKPMNCPG-------HMLVYKNSLHSYRELPIRISEFGQVHRHEFSGALN 371

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +       D     +  D ++    +  D+   +      +  +E      D   +E
Sbjct: 372 -GMMRVRTFCQDDAHIFVRPDQIQEEIKQVIDFISRVYQVFGFEYTIELSTRPEDSMGSE 430

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD-FTKGANLTSEQIDIMVSFLSIDLEKS 251
            L       +  +  LQ V   LG     N GD    G  +    +D +         + 
Sbjct: 431 ELW------EQAETSLQQVLDQLGLPYRINEGDGAFYGPKIDFHILDSLKRSWQCGTIQL 484

Query: 252 MHELYELVKGTIAGEKGFNE 271
             +  E    +  GE     
Sbjct: 485 DFQFPEKFDLSYIGEDNQKH 504


>gi|325962798|ref|YP_004240704.1| prolyl-tRNA synthetase, family II [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323468885|gb|ADX72570.1| prolyl-tRNA synthetase, family II [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 603

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%), Gaps = 1/99 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +             V +  +    +  +  +     L  AG+   +      + G +  
Sbjct: 493 DARGLVWPRAVAPADVHVVAVGKGEEIFATAERLAAELEAAGLDVLLDDRPKVSPGVKFG 552

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            A+    P  +  G      G+++IKD   G+  +  + 
Sbjct: 553 DAELVGVPTILAVG-RGLVDGVVEIKDRRSGEAENVAVD 590



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        + +  ++   IR      G   +  P L   E  ++  ++        +G+
Sbjct: 40  GIYTWLPLGLSVLRKVEAVIREEMAAIGAQEVHFPALLPREPYEATNRWTE----YGEGL 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G    L  
Sbjct: 96  FRLQDRKGADYLLAP 110


>gi|303242609|ref|ZP_07329085.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302589866|gb|EFL59638.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 635

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R  ++  G+  I TP++   D   +     D   + ++  
Sbjct: 261 GFPFFMPKGMMLRNLLENYWREEHKARGYQEIRTPIILNEDLWHRS-GHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 319 TKIDEGDYAIKPMNCPG 335



 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/363 (10%), Positives = 92/363 (25%), Gaps = 10/363 (2%)

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
              +R E    G         ++                M  T    G         +N 
Sbjct: 277 ENYWREEHKARGYQEIRTPIILNEDLWHRSGHWDHYKENMYFTKIDEGDYA---IKPMNC 333

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
              +     K+  + D       + L    +L       +++       D++  F     
Sbjct: 334 PGGMLVYKRKLHSYRDLPQRMAELGLVHRHELSGALHGLMRVRC--FTQDDAHIFMTPEQ 391

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           +  E + ++                EL            +  + +  +R    ++ ++  
Sbjct: 392 IKDEVLGVINLIDDFYNVFGFKYHVELSTRPEDSMGSDEQWEMATNALRD-ALDARKMNY 450

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT-- 349
                 G  Y     +          +    +              V     ++ P    
Sbjct: 451 KVNEGDGAFYGPKIDFHLEDSIGRTWQCG-TIQLDFQMPQRFDLNYVGADGEKHRPVMIH 509

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     +A+ +   +      + PV +  +                L   G+R E+
Sbjct: 510 RVVFGSIERFIAILTEHFAGAFPTWLSPVQVKILPLIDKHHQFAGEVKAALEAKGVRVEV 569

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            L  ++  G +++ A     P  ++ G  E   G + ++    G   S  + +  +    
Sbjct: 570 DL-RNEKIGYKIREAQLEKTPYMLVIGDKELENGAVAVRSRKDGDLGSMALNDFVNKIVE 628

Query: 470 RVA 472
            V 
Sbjct: 629 EVE 631


>gi|228933677|ref|ZP_04096525.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826004|gb|EEM71789.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 639

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    +    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFKYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+
Sbjct: 575 DMRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSDVIE 623



 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/257 (10%), Positives = 67/257 (26%), Gaps = 15/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      K  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------KYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDKLWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFN 270
           ++ E        EK   
Sbjct: 490 QMPEKFDLNYIDEKNEK 506


>gi|296117670|ref|ZP_06836254.1| proline--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969401|gb|EFG82642.1| proline--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 585

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +  L      E       G          ++     + +P  G        ++A+ + + 
Sbjct: 415 QGTLTLKRGIELGHIFQLGRKYTQAFDVQILDENGKRAIPTMGSYGIGVSRMMAVLAEQR 474

Query: 368 STNNIKEMG------PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                           V +   + D D+        + L  AG+          + G + 
Sbjct: 475 HDEKGLNWPLDVAPYQVHVAVANKDEDATKAGNELVEALDKAGVEVLFDDRPKVSPGVKF 534

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           K A+    P   I G      G+++++ +  G+ L    ++       R
Sbjct: 535 KDAELLGMPYCAILGRS-FKDGIIELR-IRGGETLEVPAESIVDELLQR 581



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R   +I D +R      G   +  P L   E  +   ++    D     +
Sbjct: 40  GIYSWLPLGLRTLRKIEDVVREEMNAIGGQELLFPALLPREPYELTDRWTEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G  + L  
Sbjct: 96  FRLKDRKGADMLLGP 110


>gi|289422357|ref|ZP_06424203.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289157192|gb|EFD05811.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 641

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 38/102 (37%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +          +   + L  AGIR E+    ++  G +++ A     P  +
Sbjct: 534 WLAPCQVKVLSVSDKYNEFAKELVEKLFDAGIRVELD-DRAEKVGFKIREAQLEKIPYML 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E   G+L ++   +G+     I    +  + ++    
Sbjct: 593 VVGEKEMESGLLSVRSRDEGELGQMSIDEFLAKIKKQIEDRE 634



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 33/89 (37%), Gaps = 2/89 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E   GF     +   ++  ++     I+    +  IETP++  +  L +        
Sbjct: 254 MIPEEGPGFPLFLPRGTALKQSLMKYWEEIHREAHYVEIETPII-LNRKLWETSGHWFHY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYV 95
            + ++++Q  D +  +++         Y 
Sbjct: 313 KENMYTVQI-DEEDYAIKPMNCPGAMLYY 340


>gi|296084987|emb|CBI28402.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 55/462 (11%), Positives = 112/462 (24%), Gaps = 76/462 (16%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  I DS + I+  +G+D +                            
Sbjct: 301 GLVFWHPKGAIVRRIIEDSWKKIHIEHGYDLLY--------------------------- 333

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                         T  +AR               YR     +          + + C  
Sbjct: 334 --------------TPHVARAD---LWKTSGHLDFYRENMYSQITIEDELYQLRPMNCPY 376

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +    +        +    L  V                L G+    G   DD     
Sbjct: 377 HILIYKRKLHSYRDFPIRVAELGTV--------YRYELSGSLHGLFRVRGFTQDDAHIFC 428

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                    L+      ++ +L     D + +       +  ++++            + 
Sbjct: 429 ---------LEDQIKDEIRGVL-----DLTEEILLQFGFSKYEVNLSTRPEKAVGADDIW 474

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E           +KG++    I E           +KI   + R  +  T       L F
Sbjct: 475 EKATSALRDALDDKGWSY--RIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQANRLDLSF 532

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               +   P  F         +                        V ++          
Sbjct: 533 TKEVDFNLPQRFDITYVDSNSEKQRPIMIH----RAVLGSLERFFGVLIEHYAGDFPLWL 588

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +  +      L      T  L+  GIRAE+  G        ++ ++++  PL  
Sbjct: 589 SPIQARVLPV--TDTQLEYCNEVTNKLKANGIRAEVCHGER--LPKLIRNSEKQRIPLMA 644

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     + ++    G+  +  +++  S  ++     T
Sbjct: 645 VVGPKEVETQTVTVRSRFGGELGTMIVEDFISRTKSATENRT 686


>gi|255325212|ref|ZP_05366318.1| proline--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297777|gb|EET77088.1| proline--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 589

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/177 (11%), Positives = 52/177 (29%), Gaps = 26/177 (14%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG- 376
           E       G          ++     + VP  G        ++A+ + +   +       
Sbjct: 430 ELGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGIGITRMLAVLAEQRHDDKGLNWPV 489

Query: 377 -----PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D+ ++       + L   G+          + G + K A+    P 
Sbjct: 490 AVAPYQVHVAVANKDAAAMEAGDKLVEELSAKGLEVLFDDRPKVSPGVKFKDAELLGMPF 549

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
             I G      G ++++ +  G+                   + +P  ++V  + ++
Sbjct: 550 VAILG-RAFKEGKIELR-IRGGE------------------TLEVPAEDIVDKILEL 586



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R   +I D +R   +  G   +  P L   E  +   +++   D     +
Sbjct: 40  GVYTWLPLGLRTLRKIEDVVRQEMDAIGGQEMLFPALLPREPYEKTNRWVEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D     + L  
Sbjct: 96  FRLKDRKNADMLLGP 110


>gi|49479942|ref|YP_036488.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|218903521|ref|YP_002451355.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228927442|ref|ZP_04090498.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229121934|ref|ZP_04251153.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|49331498|gb|AAT62144.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|218538936|gb|ACK91334.1| threonyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228661583|gb|EEL17204.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228832235|gb|EEM77816.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 639

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    +    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFKYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+
Sbjct: 575 DMRDEK-LGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSDVIE 623



 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/257 (10%), Positives = 67/257 (26%), Gaps = 15/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      K  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------KYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDKLWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFN 270
           ++ E        EK   
Sbjct: 490 QMPEKFDLNYIDEKNEK 506


>gi|318056620|ref|ZP_07975343.1| prolyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318080757|ref|ZP_07988089.1| prolyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 563

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 49/134 (36%), Gaps = 5/134 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
           + D L    K   V    + IG+SR + AL      +       E+ P  +  +      
Sbjct: 424 QLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLCWPAEVSPADVHVVAAGKVL 483

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++        L  AG R  +   +  + G +   A+    P  +I G    + G++++K
Sbjct: 484 QTELALEIADKLAAAGARVLVDDRAGVSPGVKFTDAELIGVPKTVIAGRRS-AEGIVELK 542

Query: 449 DLAKGKELSREIKN 462
           D   G+     ++ 
Sbjct: 543 DRRTGEREELSVEE 556



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ + I   +R   +  G   +  P L   +         +     +F L+D  
Sbjct: 46  WLPLGKKVLDNISQIVREEMDAIGAQEVLLPALLPREPYEAS-GRWEEYGDLLFRLKDRK 104

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 105 GADYLLGP 112


>gi|302522218|ref|ZP_07274560.1| prolyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302431113|gb|EFL02929.1| prolyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 563

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 49/134 (36%), Gaps = 5/134 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
           + D L    K   V    + IG+SR + AL      +       E+ P  +  +      
Sbjct: 424 QLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLCWPAEVSPADVHVVAAGKVL 483

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++        L  AG R  +   +  + G +   A+    P  +I G    + G++++K
Sbjct: 484 QTELALEIADKLAAAGARVLVDDRAGVSPGVKFTDAELIGVPKTVIAGRRS-AEGIVELK 542

Query: 449 DLAKGKELSREIKN 462
           D   G+     ++ 
Sbjct: 543 DRRTGEREELSVEE 556



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ + I   +R   +  G   +  P L   +         +     +F L+D  
Sbjct: 46  WLPLGKKVLDNISQIVREEMDAIGAQEVLLPALLPREPYEAS-GRWEEYGDLLFRLKDRK 104

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 105 GADYLLGP 112


>gi|325957845|ref|YP_004289311.1| threonyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329277|gb|ADZ08339.1| threonyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 614

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 50/184 (27%), Gaps = 9/184 (4%)

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQ---KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           R   +     + AI       E       V  G   G    D   +      +  +    
Sbjct: 413 RKHYWIAKMDFAAIDYLGRPIENPTIQIDVESGERFGITYIDPDENEVHPIIIHCSPTGS 472

Query: 354 GISRLIVALKSLESSTNNIKEMGPVL-----ITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
               +   L+      N    M P+      +  +          Q   Q +R   +R +
Sbjct: 473 IERVICSLLEKSAIERNFRPPMLPIWLTPSQVRVIPIAERHNDYAQDIVQKIRDQNVRVD 532

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +     +  G +++ A     P  I+ G  E   G + +      +++  +I    +   
Sbjct: 533 LD-ERHETVGKKIRNAAGDWVPYVIVIGDRELEGGAVTVNVRETNEKIEMDIDELVNRIH 591

Query: 469 ARVA 472
               
Sbjct: 592 EETK 595


>gi|20091717|ref|NP_617792.1| threonyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|22654112|sp|Q8TLX7|SYT_METAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19916894|gb|AAM06272.1| threonyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 635

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/229 (8%), Positives = 60/229 (26%), Gaps = 17/229 (7%)

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
             + ++    +               R                    A+    +  E  +
Sbjct: 404 YESNKELVVNMAKTVNKPVLVEMWDTRFFYFVLKFEFNFVDALAKASALSTVQIDVENAE 463

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                 V   G+ +  +      +         +                   + P  + 
Sbjct: 464 RYDISYVNADGKLERPIVLHCSPSGAIERCIYALLEKAAMETEEGKVPMLPVWLSPTQVR 523

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +      L+  +  ++ L     R ++      + G +++ A R   P  ++ G  E  
Sbjct: 524 IVPISEKHLAFAEEVSKKL---DCRVDID-DRDLSIGKKVREAGREWVPYVVVIGDKEME 579

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
            G + +   A+ ++              + +++ I   EL + ++  + 
Sbjct: 580 EGTINVTVRAESEQ-------------NKPSKVQITPEELNARIRGEIA 615



 Score = 37.9 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 72/184 (39%), Gaps = 25/184 (13%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD--SLGKFLPDEDRPNKGVFSLQD 75
              K   +++ + + + ++   +G   +ETPL+   +  +L K+L   DR     +S++ 
Sbjct: 239 YYPKGRLVKSLLENYVLDVATEFGAMEVETPLMYDMNHPTLKKYL---DRFPARQYSIE- 294

Query: 76  DDGQWISLRY-----------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            D + + LR+           D+T        +N    +     Y      R E  G  R
Sbjct: 295 SDKRQMFLRFAACFGQFLMNHDMTISY-----KNLPLRMIEMTRYSFRKEQRGELVGLRR 349

Query: 125 FRQFIQCDVDNVGSSAETADAEM---CMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            R F   D+  +      A ++      +  D LE VGI  +DY + I   +      ++
Sbjct: 350 LRAFTMPDMHTLCEDMNQAVSQFKEQYDLCIDVLENVGIHIDDYEVAIRFTRDFYESNKE 409

Query: 182 IGLH 185
           + ++
Sbjct: 410 LVVN 413


>gi|15673893|ref|NP_268068.1| theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281492524|ref|YP_003354504.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|22654138|sp|Q9CED2|SYT_LACLA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|12724948|gb|AAK06009.1|AE006421_2 theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|281376188|gb|ADA65679.1| Threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|326407464|gb|ADZ64535.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 646

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/459 (10%), Positives = 102/459 (22%), Gaps = 80/459 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A        IR  I   + +     G+  + TP                         
Sbjct: 262 GTAYWLPAGATIRRIIERFVVDQEVKNGYQHVITP------------------------- 296

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                V  N +T                       +      D 
Sbjct: 297 ---------------------VMMNLNTYKQSGHWQHY---------HEDMYPPMDMGDG 326

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           + +        + + +          +       G+ +R    G L  +    +      
Sbjct: 327 EEMELRPMNCPSHIAIYKHHVHSYRELPIRIAEFGMMHRYEKSGALSGLQRVRE------ 380

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   D      L+ V+    +       D  +   +       +      D  K   
Sbjct: 381 ---MTLNDGHTFVMLEQVQEEFSK-ILQLIMDMYRDFGINDYSF-RLSYRDPKDTVKYFP 435

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +     K     +   +++    + V   G  +         V+        +    L F
Sbjct: 436 DDEMWEKSQAMLKATMDDMN--LDYVEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDF 493

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                               Y G         +   G    + R I  L  +        
Sbjct: 494 LNPENFDI-----------SYIGADGEKHRPVMIHRGVISTLERFIAYLIEVYKGAFPTW 542

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                      ++           + L+  G R  +   +++  G +++ +     P  I
Sbjct: 543 LAPTQATIIPVNNEIHADYAWKIQRELQDKGFRVVVD-EANEKMGWKIRQSQTHKIPYQI 601

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E++ G + I+     +     ++       A VA
Sbjct: 602 VIGDQEQADGTVNIRRYGSKETKVIPLEEFIENISADVA 640


>gi|325847870|ref|ZP_08170092.1| proline--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480888|gb|EGC83941.1| proline--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 572

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +R+ N+I + +R   E Y    + T +L+  D   K           +F 
Sbjct: 37  SGVYSYLPLGMRVINKIENIVRKSMEKYDSIEVSTSVLQSKDIWEKS-GRWQNFGPEMFK 95

Query: 73  LQDDDGQWISLRY 85
           ++D   +   L  
Sbjct: 96  IKDRHDREYCLGP 108


>gi|288559908|ref|YP_003423394.1| glycyl-tRNA synthetase GlyS [Methanobrevibacter ruminantium M1]
 gi|288542618|gb|ADC46502.1| glycyl-tRNA synthetase GlyS [Methanobrevibacter ruminantium M1]
          Length = 570

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 2/94 (2%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V +  + +           T  LR AG   +    +S   G +   AD    P+AI   
Sbjct: 477 QVSVFPLMNRDGLGEIATEITHNLREAGFTVDND--TSGTIGKRYARADEVGVPIAITVD 534

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              +    + +++    ++   +I++ +   E +
Sbjct: 535 YDTKEDDTVTVRNRDTEEQERVKIEDLKEVIETK 568



 Score = 39.8 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           GF D       ++N I+   R  Y    GF  IE P +   + L K     D     + 
Sbjct: 27 SGFTDYGPLGASLKNNIMQKWRKQYIAGEGFHEIEGPTVMPKEVL-KASGHVDNFTDPMT 85

Query: 72 SLQD 75
            +D
Sbjct: 86 KCKD 89


>gi|124027839|ref|YP_001013159.1| threonyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|166223348|sp|A2BLF3|SYT_HYPBU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123978533|gb|ABM80814.1| Threonyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 625

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 58/178 (32%), Gaps = 11/178 (6%)

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A   F V N K+  + +        Y  ++      ++    + +  + +   ++    +
Sbjct: 433 ATFQFDVGNAKRFGIRYVDENNKEHYPVIIHTALIGSIERYIYMVFDAAVK--MERRGQT 490

Query: 369 TNNIKEMGPVLITTMDHD---SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 + P+ +  +  +      LS  +    +L    IR ++      + G +++ A 
Sbjct: 491 PYIPTWLAPIQVRLIPVNPSSEQQLSHAEKVASLLERHLIRVDID-DRQLSLGRRIRDAA 549

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA-----QITIPI 478
           R   P   + G  E   G + +        ++ + +         +      Q T+P 
Sbjct: 550 REWIPYIAVIGDREVETGTVNVTIRRTNDRVAVKPEELLEMVLKDLEGYPRVQSTLPR 607


>gi|219666254|ref|YP_002456689.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219536514|gb|ACL18253.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 639

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN++ D  R  +   G+  I+TP++  S +L +     D     +++ 
Sbjct: 262 GFPFFHPKGMVLRNQLEDFWRQEHRKRGYHEIKTPII-LSRNLWENSGHWDHYKDNMYTT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
           +  D +  +++            +   +   
Sbjct: 321 KI-DDEDFAVKPMNCPGGMIMYKQKLRSYRD 350



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 46/145 (31%), Gaps = 18/145 (12%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     +AL +   +      + PV +  +          Q   + L    IRAE+
Sbjct: 511 RVVYGSIERFIALLTEHYAGAFPTWLAPVQVRVLPISERHEDYAQDIVRRLNDLDIRAEV 570

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                +    +++ A     P A++ G  E     + ++                     
Sbjct: 571 D-ERREKISYKIREAQTHKIPFALVVGDQEAETDTVAVRR-----------------YGQ 612

Query: 470 RVAQITIPISELVSTVKKILQENKE 494
             A   + ++E ++ +++ +   K+
Sbjct: 613 ANAGEKLSVAEFIALIQEEICSKKQ 637


>gi|330466868|ref|YP_004404611.1| threonyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328809839|gb|AEB44011.1| threonyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 666

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 19/112 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D       +   LR  GIRA++  G  +    +++ A ++  P  +
Sbjct: 559 WLAPVQVVGIPIRDDHADYLHGFVAALRAEGIRAQVDSGDER-MQKKIRNAQQQKIPFMV 617

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           I G  + + G +  +    G + +                  +P++E V+ V
Sbjct: 618 IAGDDDVAAGTVSFRY-RDGSQRNG-----------------VPLAEAVTHV 651


>gi|313681237|ref|YP_004058975.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Sulfuricurvum
           kujiense DSM 16994]
 gi|313154097|gb|ADR32775.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfuricurvum
           kujiense DSM 16994]
          Length = 602

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/365 (10%), Positives = 107/365 (29%), Gaps = 17/365 (4%)

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           F+  +       +  +    ++   +         M    ++ +       +   + +  
Sbjct: 248 FKAHRKRGYEPVRGPEMLRSDLWKVSGHYQNYGENMYFTHIDELEFGVKPMNCVGHIKVY 307

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
              +     L    K  E  +V R        GL  V+    +            A+   
Sbjct: 308 EHDLHSYRDLPL--KYFEYGVVHRHEMTGALHGLFRVREFTQDD-----AHIFCTADQIE 360

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           +QI  +V F+   ++        ++        G + +  IS    K+  + N +     
Sbjct: 361 QQIIEVVDFVDKIMKTFEFNYKMMISTKPEKAVGDDAVWEISTNALKTAMDKNNLSYEID 420

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPAT 349
              G  Y      +       +  + +                 Y+G  +      +   
Sbjct: 421 EGGGAFYGPKIDIKIT---DAIGREWQCGTIQLDFNLPARFELEYNGEENAKIQPVMIHR 477

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                  R +  L    +    +  + P  +  +       +  +     L   G   E+
Sbjct: 478 AILGSFERFVGILTEHYAGEFPMF-IAPTQVAIVPIAPTHEAYARELADKLIDMGADFEI 536

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               +++   +++ A++   P+ I+ G  E +   + ++D    ++ +   ++  S  + 
Sbjct: 537 -FDKNESLNKRIRTAEKGRVPMIIVLGDEEVANKSIAVRDRRSREQYNLSEEDFISLVKQ 595

Query: 470 RVAQI 474
           ++ ++
Sbjct: 596 KINEV 600



 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 31/106 (29%), Gaps = 3/106 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF        R+R+R+   +   +   G++P+  P +  SD L K         + ++  
Sbjct: 228 GFPIWLPAGARMRSRLEQLLFKAHRKRGYEPVRGPEMLRSD-LWKVSGHYQNYGENMY-F 285

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              D     ++        +   E+                  +  
Sbjct: 286 THIDELEFGVKPMNCVGHIKVY-EHDLHSYRDLPLKYFEYGVVHRH 330


>gi|257440090|ref|ZP_05615845.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197442|gb|EEU95726.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 611

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/342 (11%), Positives = 93/342 (27%), Gaps = 10/342 (2%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M     +       +   I  N       +  +IG    D   
Sbjct: 273 TSGHWDHYRENMFPAMEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIAHDFRY 332

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L+ I++   F      L     +  +           + +   +  +  +   + 
Sbjct: 333 ESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVADVCNLIFETYKDFKITDYRCVLSLRD 392

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +  +            N L  +   +    + +  I  ++     L+        A  
Sbjct: 393 PADKKKYHDDDAMWNHAENALREVLTEL--GIHFTEEIGEAAFYGPKLDVNVKPAVGAEY 450

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                                  D   S      +           +   ++  +     
Sbjct: 451 TLSTCQLDFCLPA---KFHLTYVDKDGSEKTPVVLHRAILGSLDRFMAYLIEETKGKFPT 507

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN-CP 430
              + PV +  +     +L   +  T+ L  AG+R  +    ++  G +++ A + +  P
Sbjct: 508 W--LAPVQVKVLPVSEKTLEYAESITEKLVEAGVRVALD-DDNQKIGYKIRAAQQVDRVP 564

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             ++ G  E   G L ++D  KG+  + E+    +     + 
Sbjct: 565 YMLVLGAKEAEAGNLSVRD-RKGETTTMEVDEFIAKVTEEIK 605



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 38/137 (27%), Gaps = 8/137 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG          +   + + I+      G+  + TP +   +   K     D   + +F 
Sbjct: 228 RGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLY-KTSGHWDHYRENMFP 286

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR             +         +YR  P+   E     R+       
Sbjct: 287 AMEMEGESYVLRPMNCP-------HHMMIYANRPHSYRDLPMRIGEIAHDFRYESSGTLK 339

Query: 133 VDNVGSSAETADAEMCM 149
               G      DA +  
Sbjct: 340 GIERGRHFCQNDAHLFC 356


>gi|229133217|ref|ZP_04262049.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228650236|gb|EEL06239.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 639

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 68/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +EL  ++   S   K  
Sbjct: 396 IEDEIKSVLAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAELALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AGIR E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEKYANRIADKLAQAGIRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E     + ++    G+E S  ++
Sbjct: 575 DIRDEK-LGYKIREAQMQKVPYVLVIGDKEMESEAVNVR--KYGEEKSEVVE 623



 Score = 54.8 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 33/114 (28%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I   Y +  + TP +   +   K           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQELWEKS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDHKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|227495079|ref|ZP_03925395.1| proline--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831531|gb|EEH63914.1| proline--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 603

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 42/132 (31%), Gaps = 19/132 (14%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +   I     + +       +         + +  AG           + G +  
Sbjct: 488 DENGLAWPMILAPFHLQVLATGKGEELFETAGSIAKAVSDAGFDVLYDDRPKVSAGVKFA 547

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A+    P  ++ G      G+++++D   G                    + +P++E  
Sbjct: 548 DAELLGMPYVLVVG-RGLKDGVVELRDRRNGT------------------AVELPVAEAS 588

Query: 483 STVKKILQENKE 494
           + + ++L+EN+E
Sbjct: 589 AEILRVLEENRE 600



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
               G        +++  RI   +R   +  G   +  P L  ++   K     +     
Sbjct: 36  RTAPGIYTWLPLGLQVLKRIEKVVREEMDAVGAQEVHFPALLPAEPYQKTN-RWEEYGPT 94

Query: 70  VFSLQDDDGQWISLRY 85
           +F L+D       L  
Sbjct: 95  LFKLRDRKAADYLLAP 110


>gi|89892986|ref|YP_516473.1| threonyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89332434|dbj|BAE82029.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 641

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN++ D  R  +   G+  I+TP++  S +L +     D     +++ 
Sbjct: 264 GFPFFHPKGMVLRNQLEDFWRQEHRKRGYHEIKTPII-LSRNLWENSGHWDHYKDNMYTT 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
           +  D +  +++            +   +   
Sbjct: 323 KI-DDEDFAVKPMNCPGGMIMYKQKLRSYRD 352



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 46/145 (31%), Gaps = 18/145 (12%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     +AL +   +      + PV +  +          Q   + L    IRAE+
Sbjct: 513 RVVYGSIERFIALLTEHYAGAFPTWLAPVQVRVLPISERHEDYAQDIVRRLNDLDIRAEV 572

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                +    +++ A     P A++ G  E     + ++                     
Sbjct: 573 D-ERREKISYKIREAQTHKIPFALVVGDQEAETDTVAVRR-----------------YGQ 614

Query: 470 RVAQITIPISELVSTVKKILQENKE 494
             A   + ++E ++ +++ +   K+
Sbjct: 615 ANAGEKLSVAEFIALIQEEICSKKQ 639


>gi|328715117|ref|XP_001947667.2| PREDICTED: eukaryotic translation initiation factor 2-alpha kinase
            4-like [Acyrthosiphon pisum]
          Length = 1242

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 127/389 (32%), Gaps = 28/389 (7%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
              ++I+D ++ I++ +G   + TPLL  +             N+   ++    G    + 
Sbjct: 675  RLDKIIDIVKEIFQLHGGVWLCTPLLMPA--------LNSMINENTVTMMARWGGLTCIP 726

Query: 85   YDLTAPLARYVAEN---FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
            ++L  P AR++A N    +   +                       F           AE
Sbjct: 727  HNLRIPFARFLAHNPTISNLKRYSIDRVYRQRRVYGVHPRELYEAAFDIISTSQGDLIAE 786

Query: 142  TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA-I 200
                 +   +   L+     +N+  I +N+  ++ GIL   G+     L       R   
Sbjct: 787  AELLSIAAEIFSKLKDFN--QNNCIIRLNHMSLVQGILMYSGIERARHLEICSYFARFKQ 844

Query: 201  DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
            + L    ++ ++LL       N          T   +  +   +++   K      E + 
Sbjct: 845  NDLTTEQIEELELLGFANHQINIAMNFFTMEHTLADMIEICHKITVRKSKCGVFSREGLH 904

Query: 261  GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                  K    L +   +V   G  +            +++Y+G ++E +        K+
Sbjct: 905  HLETVIKHIESLNIKFSVVIVPGLMNI-----------MQFYSGLIFEIVYYNK---SKK 950

Query: 321  KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                +  +  GG YD L+S F+     +         +  +L  L +          V++
Sbjct: 951  NVAEYDVLAAGGCYDKLISSFRRNLDMSNDIKQTAIGISFSLDKLAALFQPESSGLDVIL 1010

Query: 381  TTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
             + + +  +  +     + L   GI+  +
Sbjct: 1011 CSSNSNKTTTEEKLNIAKDLWAMGIKTLV 1039


>gi|78485419|ref|YP_391344.1| prolyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|114152273|sp|Q31GQ3|SYP_THICR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78363705|gb|ABB41670.1| prolyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 572

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 47/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G  +     +R+  ++   IR+         +  P+++  + L +  
Sbjct: 26  MLRAGIIRP-LAGGLYNWLPLGVRVLRKVEAIIRDEMNKAQAQELLMPVVQPME-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGP 113
              +     +   +D   +  +L     ++   L R    ++  +          +R   
Sbjct: 84  GRAEAYGPELLRFKDRHQREFALGPTHEEIITDLVRKEIRSYKQLPANFYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F             S +    +M          +G
Sbjct: 144 RPRFGVMRSREFIMKDAYSFHMDKDSLQKTYEDMYDTYNRIFTRLG 189



 Score = 40.6 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 24/112 (21%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M                  L   GI   +     +  G  
Sbjct: 460 DDKGIIWPEAIAPFQVCIVPMQMHKSPRVEEAVMTLYNELTAKGIEVLLDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G     +G ++ K     K           +   +++
Sbjct: 519 FNDMELIGIPHRIVIGERGLDKGEIEYKHRRDEKSQDIPEAEFMEFLLGKLS 570


>gi|114319700|ref|YP_741383.1| prolyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312397|sp|Q0AB94|SYP_ALHEH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114226094|gb|ABI55893.1| prolyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 568

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   +  P ++ ++   +     D+ 
Sbjct: 31  MIRKLAAGLYTWTPLGLRVLRKVEQIVREEMDRAGAHELLMPAVQPAELWQEST-RWDKY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L+D   +      
Sbjct: 90  GPELLRLKDRHERDFCFGP 108



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 8/88 (9%), Positives = 27/88 (30%), Gaps = 1/88 (1%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           M+       + +     L+  G+        ++  G +    +    P  ++ G      
Sbjct: 480 MNRSEAVTEQAEKLYAELQAEGVEVFFDDRDAR-PGVKFADMELIGIPHRLVIGDRGLKN 538

Query: 443 GMLQIKDLAKGKELSREIKNNESWREAR 470
           G+++ +     +     +    ++   R
Sbjct: 539 GVVEYRGRRDSESTDVPLAELSAFLRER 566


>gi|291460058|ref|ZP_06599448.1| threonine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417399|gb|EFE91118.1| threonine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 626

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/445 (10%), Positives = 118/445 (26%), Gaps = 53/445 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E   G      +  ++   +L   R + E +G+  I  PL+                   
Sbjct: 198 ETAPGMPYWLPRGWKMYQALLKYSREVQERHGYREIAAPLINNKKLWL-ISGHWAHYINN 256

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTI---VFPCRTYRIGPVFRNEKHGPGRFR 126
           +F +    G    L+ D   P    + EN           +      ++  E+      +
Sbjct: 257 MFMVPGVSGW---LKADAEIP---GILENLAEQGEEPKNVKIQAGSVLYNRERMDTMAAK 310

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                +          +  E+ +  ++       +++    G+   +      +   +  
Sbjct: 311 PMNCPNAMLTYKRKNRSYRELPIRYSEYDVLHRKEKSGQMNGLFRVQEFRQDDDHTFVME 370

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
               +E   ++   D++        +  L     D  GD     +     +  +++    
Sbjct: 371 SQIEDEIKDIISIADEIYSTFGVSYRAELSTRPEDFMGDIEV-WDRAEAALKRILTNKYG 429

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +    ++E      G     +  + L    +                  +      +   
Sbjct: 430 EGGFEINEGDGAFYGPKIDLQIKDALGREWQC---------GTIQLDFQLPHNFGLSYQT 480

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            E +   PV+  +          G                             + +++ +
Sbjct: 481 AEGVAAMPVVIHRAIYGSLERFIG-----------------------------IIIENFK 511

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                      V I  +  + +  +  +    +L+  GIR E     S N   ++K    
Sbjct: 512 GVFPFWLSSEQVGIVPIRTEHN--AYAKKVFSLLQKHGIRVEADYSES-NMKEKIKKYKN 568

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLA 451
              P  ++ G  E +   + I ++ 
Sbjct: 569 FKDPYILVLGDREAAENTVSI-NMR 592


>gi|134299469|ref|YP_001112965.1| threonyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|189083605|sp|A4J4Y7|SYT_DESRM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|134052169|gb|ABO50140.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Desulfotomaculum reducens MI-1]
          Length = 635

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/374 (9%), Positives = 104/374 (27%), Gaps = 8/374 (2%)

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
                  +   +R E    G         ++                  +       + +
Sbjct: 269 GMVLRNELENFWRQEHKKRGYQEIRTPIILNRSMWEQ---SGHWAHYKDNMYFTKIDEAD 325

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
                +N    +     ++  + D  L    + L    +L       +++       D++
Sbjct: 326 YAVKPMNCPGSILVYKTRMHSYRDLPLRWGELGLVHRHELSGALHGLMRVRC--FTQDDA 383

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
             F   + +  E I ++  F        ++   E +        G +E+  ++    +  
Sbjct: 384 HIFMLPSQIKDEIIGVIDLFDYFYNTFGLNYHVE-LSTRPEKSMGSDEMWEVATNSLRDA 442

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
             + ++        G  Y     +          +     +   +      + +    + 
Sbjct: 443 LEAKKMDYKVNEGDGAFYGPKIDFHLTDSLGRTWQCGTIQLDFQMPERFNLNYVGEDGQK 502

Query: 344 QNVPAT-GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
                      G     + + +   +      + PV +  +          +   + L+ 
Sbjct: 503 HRPVMIHRVVFGSIERFIGILTEHFAGAFPVWLAPVQVKVLPITDRHHEYARELVKRLQG 562

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             IR E+    ++    +++ A  +  P  ++ G  E  +G + +++  KG   +  + +
Sbjct: 563 LDIRVELD-ARNEKINYKIREAQTQKIPYMLVIGDREMEQGAVAVRERGKGDVGAISVGD 621

Query: 463 NESWREARVAQITI 476
                E  +   TI
Sbjct: 622 FIKKIEDDIQNKTI 635



 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/157 (8%), Positives = 44/157 (28%), Gaps = 2/157 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R  ++  G+  I TP++  + S+ +           ++  
Sbjct: 261 GFPFFHPKGMVLRNELENFWRQEHKKRGYQEIRTPII-LNRSMWEQSGHWAHYKDNMY-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D    +++                +       +    +    +              
Sbjct: 319 TKIDEADYAVKPMNCPGSILVYKTRMHSYRDLPLRWGELGLVHRHELSGALHGLMRVRCF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
               +      +++   +   ++      N + +  +
Sbjct: 379 TQDDAHIFMLPSQIKDEIIGVIDLFDYFYNTFGLNYH 415


>gi|113954220|ref|YP_731070.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123031674|sp|Q0I902|SYT_SYNS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113881571|gb|ABI46529.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 617

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/441 (11%), Positives = 118/441 (26%), Gaps = 86/441 (19%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I D  R  +   G++ + TP +    SL K     D   + +F  
Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPHVADI-SLWKTSGHLDFYAESMFGP 287

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +   L+                            P          R  + +    
Sbjct: 288 MEVDERQYQLKP------------------------MNCPFHVLTYASKLRSYRELPIRW 323

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +G+        +   +       G  ++D H+     +I D IL  + L         
Sbjct: 324 AELGTVYRYERPGVMHGLMRV---RGFTQDDAHVFCLPEQISDEILRILNLTER------ 374

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
             +L   D  +      +     +   D++        L         ++   +   + +
Sbjct: 375 --ILSTFDFSNYEI--NLSTKPDKAIGDDAVWELATKGLIEALKRKGWAYKIDEGGGAFY 430

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                +K   A  + +    +  +      +  + I    +  R +  +   ++ ++  F
Sbjct: 431 GPKIDLKIEDAIGRMWQCSTIQLDFNLPERFELDYIAADGSKQRPIMIH-RAIFGSLERF 489

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +  +     F       +                                        
Sbjct: 490 FGIMTENYAGDFPFWLAPEQ---------------------------------------- 509

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 I  +    + L   + +   L+ AGIRA +     +  G  ++  ++   P+  
Sbjct: 510 ------IRLLPVTDEVLGYAEEFQNQLKAAGIRASIDRSGDR-LGKLIRIGEKMKIPVLA 562

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E  +G   ++    G 
Sbjct: 563 VIGAKEAEQGAASLRSRRDGD 583


>gi|73670405|ref|YP_306420.1| threonyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121729403|sp|Q467V2|SYT_METBF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72397567|gb|AAZ71840.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Methanosarcina
           barkeri str. Fusaro]
          Length = 635

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/276 (10%), Positives = 73/276 (26%), Gaps = 21/276 (7%)

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
           L E        F K  +L  + ++ +   +  D E ++    +  +     ++    +  
Sbjct: 361 LCEDMDQAVDQFKKQYDLCIDVLENIGIHIK-DYEVAIRFTKDFYESN---KELIVNMAR 416

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
                        R                    A+    +  E  +      V   G+ 
Sbjct: 417 TVNKPVLVEMWDTRFFYFVLKFEFNFVDALAKASALSTVQIDVENAERYDISYVNADGKL 476

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +         +         +                   + P  +  +      ++  +
Sbjct: 477 ERPTVLHCSPSGAIERCIYALLEKAAMETEEGKVPMLPVWLSPTQVRIVPISEKHVAFAE 536

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             +Q L     R ++      + G +++ A R   P  ++ G  E   G + +   A+ +
Sbjct: 537 EVSQKL---DCRVDID-DRDLSIGKKVREAGREWVPYVVVIGDKEIEDGTINVTIRAESE 592

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           +              +  ++ I   EL   +K  + 
Sbjct: 593 QK-------------KPKKVQITPEELNDRIKGEIA 615



 Score = 37.5 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 25/184 (13%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD--SLGKFLPDEDRPNKGVFSLQD 75
              K   I+  + + + ++  ++G   +ETP++   +  +L K+L   DR     +S++ 
Sbjct: 239 YYPKGRLIKALLENYVLDVATDFGAMEVETPIMYDMNHPTLKKYL---DRFPARQYSIE- 294

Query: 76  DDGQWISLRY-----------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            D + + LR+           D+T         N    +     Y      R E  G  R
Sbjct: 295 SDKRQMFLRFAACFGQFLMNHDMTISY-----RNLPLRMIEMTRYSFRKEQRGELVGLRR 349

Query: 125 FRQFIQCDVDNVGSSAETADAEM---CMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            R F   D+ ++    + A  +      +  D LE +GI   DY + I   K      ++
Sbjct: 350 LRAFTMPDMHSLCEDMDQAVDQFKKQYDLCIDVLENIGIHIKDYEVAIRFTKDFYESNKE 409

Query: 182 IGLH 185
           + ++
Sbjct: 410 LIVN 413


>gi|297583666|ref|YP_003699446.1| threonyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142123|gb|ADH98880.1| threonyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 649

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 69/258 (26%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R ++   I +I E  G+D + TP+L   D   K     D     +F +
Sbjct: 265 GLPLWLPKGATVRRQVERYIVDIEERLGYDHVYTPVLGSVDLY-KTSGHWDHYQDDMFPV 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E     R         
Sbjct: 324 LQMDNEDLVLRPMNCP-------HHMMIYKNEKHSYRNLPLRIAELGTMHRHEMSGALAG 376

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA +        +              + +I D          +DK    
Sbjct: 377 LQRVRAMTLNDAHIFCRPDQLKDEFIRVVELIQAVYKDFQIKDYYFRLSYRDPEDKEKYV 436

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +K      + V  +  E    +      G  L  +    +    ++   +   
Sbjct: 437 DNDE-MWEKAQAMLKEAVDEMGVEYIEADGEAAFYGPKLDVQVKTALGKDETLSTVQLDF 495

Query: 254 ELYELVKGTIAGEKGFNE 271
            L      T  GE G + 
Sbjct: 496 HLPNRFDLTYTGEDGKDH 513


>gi|119513050|ref|ZP_01632106.1| threonyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119462292|gb|EAW43273.1| threonyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 602

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      L   +     +   GIRAE+     +  G  ++ A+++  P+  
Sbjct: 500 WLAPVQARLLPVGEAQLDFAKDVAAKMVAEGIRAEVDTSGDR-LGKIIRNAEKQKIPVMA 558

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     L I+  A G+  +  +       +  +A   
Sbjct: 559 VIGAKEVESNSLSIRTRASGELGAIPVDEVVDKMKQAIANFE 600



 Score = 41.4 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ + D ++      G+ P+ TP +   D   K      +  + +F L
Sbjct: 216 GLPLWTPKGTLLRSVLEDFLKKEQLKRGYLPVVTPHIARVDLF-KTSGHWQKYKEDMFPL 274

Query: 74  QDDDGQWISL 83
             DD +  +L
Sbjct: 275 MSDDEEAAAL 284


>gi|291566398|dbj|BAI88670.1| prolyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 601

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P ++ S+ L K     D   K    
Sbjct: 37  SGVYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQVQPSE-LWKESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +FSL+D   + ++L     ++   +AR +  ++  +       +  
Sbjct: 96  MFSLKDRRDRSLALGPTHEEVITAVARDMIRSYQQLPLHLYQIQTK 141



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++      D+  ++  Q     L  AG+   +   + +  G + K AD 
Sbjct: 495 IWPVAIAPYHAIITVPNVSDNQQMAIAQQLYSQLNQAGVETLLDDRNERA-GVKFKDADL 553

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P  I+ G      G +++   A  +     I+   S  + +++Q
Sbjct: 554 VGIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQKISQ 599


>gi|284051766|ref|ZP_06381976.1| prolyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 601

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P ++ S+ L K     D   K    
Sbjct: 37  SGVYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQVQPSE-LWKESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +FSL+D   + ++L     ++   +AR +  ++  +       +  
Sbjct: 96  MFSLKDRRDRSLALGPTHEEVITAVARDMIRSYQQLPLHLYQIQTK 141



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++      D+  ++  Q     L  AG+   +   + +  G + K AD 
Sbjct: 495 IWPVAIAPYHVIITVPNVSDNQQMAIAQQLYSQLNQAGVETLLDDRNERA-GVKFKDADL 553

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P  I+ G      G +++   A  +     I+   S  + +++Q
Sbjct: 554 VGIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQKISQ 599


>gi|209525764|ref|ZP_03274300.1| prolyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209493737|gb|EDZ94056.1| prolyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 601

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P ++ S+ L K     D   K    
Sbjct: 37  SGVYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQVQPSE-LWKESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +FSL+D   + ++L     ++   +AR +  ++  +       +  
Sbjct: 96  MFSLKDRRDRSLALGPTHEEVITAVARDMIRSYQQLPLHLYQIQTK 141



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++      D+  ++  Q     L  AG+   +   + +  G + K AD 
Sbjct: 495 IWPVAIAPYHVIITVPNVSDNQQMAIAQQLYSQLNQAGVETLLDDRNERA-GVKFKDADL 553

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P  I+ G      G +++   A  +     I+   S  + +++Q
Sbjct: 554 VGIPYRIVTG-RAIKSGKVELVQRADHESSEVPIEQVVSLLQQKISQ 599


>gi|315303326|ref|ZP_07873955.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628306|gb|EFR96810.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 640

 Score = 59.5 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/373 (10%), Positives = 99/373 (26%), Gaps = 20/373 (5%)

Query: 92  ARYVAENF---DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            R V E +                 +   E +           D+               
Sbjct: 272 IRRVIERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRP 331

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
           M     +       + Y         L G++ +  + G     +R+  +   D       
Sbjct: 332 MNCPHHMMIYKNDIHSYRELPIRIAEL-GLMHRYEMSGALSGLQRVRGMTLNDAHVFVRP 390

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
             +K    +   +   +  K  ++T      +      + EK   +     K     +  
Sbjct: 391 DQIKDEF-KRVVELILEVYKDFDITDYSF-RLSYRDPKNTEKYFDDDAMWDKAQTMLKSA 448

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
            +E+    +     G  +         V+        +    L F +             
Sbjct: 449 MDEM--GMDYFEADGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTY----- 501

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
                      + +   +     S     +   ++  + +         + +  ++ D+ 
Sbjct: 502 -----IAEDGEKHRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNADA- 555

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            L   +     L+ AG+R E+    ++  G +++ A  +  P A++ G  E   G + ++
Sbjct: 556 HLDYAKGVQDKLQRAGLRVEVD-DRNEKLGYKIREAQTKKIPYALVLGDQEMESGTVNVR 614

Query: 449 DLAKGKELSREIK 461
                   + ++ 
Sbjct: 615 RYGSKDSETMDLD 627



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              D + + LR             +         +YR  P+   E     R+  
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAELGLMHRYEM 366


>gi|258512139|ref|YP_003185573.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478865|gb|ACV59184.1| threonyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 648

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 46/145 (31%), Gaps = 20/145 (13%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G    + R +  L            + P  +       +     +     LR  GIRAE 
Sbjct: 520 GVVGTMERFVAFLIEQYKGAFP-TWLAPTQVVVASVADEFAGYAEEVAAKLRELGIRAEA 578

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +  +K  G +++ A     P  ++ G  ER  G + ++                  +  
Sbjct: 579 DVSDNK-IGYKIRQAQTHKIPYTLVVGAREREEGSVSVR------------------KYQ 619

Query: 470 RVAQITIPISELVSTVKKILQENKE 494
                 +P+ + V  ++  ++   +
Sbjct: 620 AGDLGAMPLDQFVRQIQDEIERKAK 644



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +IR  I   I ++ E+ G+  + TP L   +   K     +     ++  
Sbjct: 264 GLPLWLPNGAKIRRIIERYIVDLEESLGYQHVYTPHLANVELY-KISGHWEHYKDDMYPP 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              D + + LR             +         +YR  P+   E     R+  
Sbjct: 323 MKIDNEELVLRPMNCP-------HHMMVYKHRLHSYRELPIRIAELGTMHRYEM 369


>gi|116075451|ref|ZP_01472711.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116067648|gb|EAU73402.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 609

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 55/441 (12%), Positives = 123/441 (27%), Gaps = 86/441 (19%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I D  R  +   G++ + TP +    SL K     D  ++ +F  
Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPHVADI-SLWKTSGHLDFYSESMFGP 287

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D +   L+  +  P       +  T     R+YR  P+   E     R+ +      
Sbjct: 288 MVVDEREYQLKP-MNCPF------HVLTYASTLRSYRELPIRWAELGTVYRYERPGVMHG 340

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                                +   G  ++D H+     +I D IL  + L         
Sbjct: 341 --------------------LMRVRGFTQDDAHVFCLPEQISDEILRILDLTER------ 374

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
             +L   D  +      +     +   D++        L          +   +   + +
Sbjct: 375 --ILSTFDFKNYEI--NLSTRPEKSIGDDAVWDLATKGLIEALERKGWDYKVDEGGGAFY 430

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                +K   A  + +    +  +      +  + +   S+  R +  +   ++ ++  F
Sbjct: 431 GPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYVAADSSKQRPIMIH-RAIFGSLERF 489

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +  +     F       +                                        
Sbjct: 490 FGIMTENYAGDFPFWLAPEQ---------------------------------------- 509

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 I  +    +  S  +     L+ AG+RA +   S +  G  ++  ++   P+  
Sbjct: 510 ------IRLLPVTDEVQSYAESLCDQLKAAGVRASVD-RSGERLGKLIRTGEKMKIPVLA 562

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E  +    ++    G 
Sbjct: 563 VIGAKEAEQASASLRSRRDGD 583


>gi|302542146|ref|ZP_07294488.1| proline-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302459764|gb|EFL22857.1| proline-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 569

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
           + D L    K   V    + IG+SR++ AL      +S     +E+ P  +  +      
Sbjct: 430 QLDVLGQNGKPVRVTMGSYGIGVSRVVAALAEQTFDDSGLCWPREVAPADVHIVAAGKAL 489

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++      + L TAG+R  +   +  + G +   A+    P  ++ G      G++++K
Sbjct: 490 QTELALDLAEKLGTAGVRVMVDDRAGVSPGVKFTDAELIGVPTILVVG-RGAKDGVVELK 548

Query: 449 DLAKGKELSREIKN 462
           D   G      I  
Sbjct: 549 DRRTGDREELPIDE 562



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++   +   +R   +  G   +  P L   +         +     +F L+D  
Sbjct: 49  WLPVGKKVLENVSRIVREEMDAIGAQEVLLPALLPKEPYEAS-GRWEEYGDLLFRLKDRK 107

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 108 GGDYLLGP 115


>gi|229032221|ref|ZP_04188194.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|229076078|ref|ZP_04209046.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229105203|ref|ZP_04235852.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678129|gb|EEL32357.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228706941|gb|EEL59146.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228729001|gb|EEL80004.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 645

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 91/337 (27%), Gaps = 23/337 (6%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M M   + +       +   +  N+      +  +I   G     
Sbjct: 311 TSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRY 370

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT------SEQIDIMVSFLS 245
           E    L  + ++    L    + +   +            L        E     +S+  
Sbjct: 371 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKDFGLENYSFRLSYRD 430

Query: 246 I-DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
             D +K   +     K     ++  +E+    +     G  +         VR       
Sbjct: 431 PADTKKYYADDEMWEKAQGMLKEAMDEM--GLDYYEAEGEAAFYGPKLDVQVRTALGKDE 488

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +    L F +    +   V               + +   +     S     +   ++ 
Sbjct: 489 TLSTVQLDFLLPERFELAYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEE 538

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            + +           +  +      L   +     LR AGIR E+     K  G +++ A
Sbjct: 539 YKGAFPTWLAPVQAQVIPVSPQV-HLDYAKKVQDELRRAGIRVELDTREEK-IGYKIREA 596

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             +  P  ++ G  E +   + ++    G++ S  I 
Sbjct: 597 QMQKIPYMLVVGDNEVTENGVNVR--KYGEQKSETIA 631



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 70/258 (27%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L   +         +    G+F  
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVLGSRELYETS-GHWNHYRDGMFPS 325

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 326 MEMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGTMHRYEMSGALSG 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA + +      E +  +  +  + +     L+    ++         + 
Sbjct: 379 LQRVRGMTLNDAHIFVRPDQIKEELK-RVVNLTLEVYKDFGLENYSFRLSYRDPADTKKY 437

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +K      + +  +  +           G  L  +    +    ++   +   
Sbjct: 438 YADDEMWEKAQGMLKEAMDEMGLDYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLDF 497

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  +    GE G   
Sbjct: 498 LLPERFELAYVGEDGKQH 515


>gi|218961058|ref|YP_001740833.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729715|emb|CAO80627.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 633

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  +      L+  +   + L   G R E+    S+  G +++ A++   P   
Sbjct: 537 WLAPVQIMLIPITDAQLNYARKIEEQLLEQGFRCELD-SRSEKMGYKIRSAEKNKIPFMC 595

Query: 434 IQGTGERSRGMLQIK 448
           I G  E +   + ++
Sbjct: 596 ILGKNEENNNQVTLR 610



 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 45/388 (11%), Positives = 105/388 (27%), Gaps = 20/388 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ I    +  +   G+  + TP L  ++ L +     D   + ++S 
Sbjct: 262 GLVLWHPKGAMVRHLIETYWKEQHLKKGYQLVYTPHLGRAN-LWETSGHLDFYKENMYSK 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D +GQ   ++  +  P       +         +YR  P+   E     R+ +      
Sbjct: 321 MDIEGQDYYIKP-MNCPF------HISIYNSSLHSYRELPIRLAELGTVYRYERSGVLHG 373

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA +        E + ++ +   +   +     G  E + ++   K ++ 
Sbjct: 374 LMRVRGFTQDDAHIICTP----EQMDMEVDKLIVFSLDMLKAFGFKEFL-IYLATKPDDC 428

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      DK        ++ L  E + D  G    G  +  +  D +         +   
Sbjct: 429 VGEKEDWDKATASLANSLQKLGLEYKVDEGGGAFYGPKIDIKIKDALGRAWQCTTIQFDF 488

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
              E    T  G                       ++     +         ++ A +  
Sbjct: 489 NEPERFDMTYIGADNSAH-----RPYMIHRAVLGSVERFFATLLEYHSGNLPLWLAPVQI 543

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF--SIGISRLIVALKSLESSTNN 371
            ++      + +         +              G+         I  +  L  +  N
Sbjct: 544 MLIPITDAQLNYARKIEEQLLEQGFRCELDSRSEKMGYKIRSAEKNKIPFMCILGKNEEN 603

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             ++     T  D  + +L       + 
Sbjct: 604 NNQVTLRQHTVGDLGAMNLEAAIAILRK 631


>gi|307544897|ref|YP_003897376.1| prolyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307216921|emb|CBV42191.1| prolyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 573

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R   ++ + +R      G   +  P ++ ++ L +     D+ 
Sbjct: 31  MIRRLNAGLYTWLPLGLRTLRKVENIVREEMNRAGAQEVLMPAIQPAE-LWQESGRWDQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  ++D   +      
Sbjct: 90  GNLLLRIRDRHDRDFCYGP 108


>gi|169829542|ref|YP_001699700.1| threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|168994030|gb|ACA41570.1| Threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 643

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/383 (11%), Positives = 101/383 (26%), Gaps = 20/383 (5%)

Query: 92  ARYVAENF---DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            R V E +     +    +      +   E +         Q  +               
Sbjct: 276 IRRVIERYIVDKELSLGYKHVYTPVLGSKELYQTSGHWDHYQDSIFPPMEMDNETLIMRP 335

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
           M     +       + Y         L G + +  + G     +R+  +   D       
Sbjct: 336 MNCPHHMMVYKNSMHSYRSLPLRIAEL-GTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRP 394

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
             +K    +       +  K  +L       +      D EK  ++     K     ++ 
Sbjct: 395 DQIKAEFQK-VVQLILEVYKDFDLNDYSF-RLSYRDPADTEKYFNDDAMWEKAQSMLKEA 452

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
            +EL    +     G  +         V+        +    L F +        V    
Sbjct: 453 MDEL--GLDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLSYVGE-- 508

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
                 DG   R    +            +   ++  + +         V +  + +++ 
Sbjct: 509 ------DGKPHRPVVIHRGVVSTM--ERFVAFLIEEYKGAFPTWLAPVQVEVIPVSNEA- 559

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                +   + L  AG+R EM     K  G +++ A  +  P  ++ G  E     + ++
Sbjct: 560 HFDYAKQIEEQLTAAGLRVEMDDREEK-LGYKIREAQMKKIPYMLVIGDKEVEAKGVNVR 618

Query: 449 DLAKGKELSREIKNNESWREARV 471
                   +   +N  +  +A +
Sbjct: 619 RYGSKDSETISFENFLAAIKAEI 641


>gi|83647457|ref|YP_435892.1| prolyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|114152199|sp|Q2SD07|SYP_HAHCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83635500|gb|ABC31467.1| prolyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 574

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 7/79 (8%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +  G   +  P ++ ++   +     ++ 
Sbjct: 31  MIRKLAAGLYTWLPLGLRVLKKVENIVREEMDRSGAQEVLMPAVQPAELWIES-GRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +   +  
Sbjct: 90  GGELLRIHDRHNRDFCVGP 108



 Score = 37.1 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 32/111 (28%), Gaps = 19/111 (17%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M        K +     L  AG+   +   + +  G +    +    P  ++      
Sbjct: 483 LNMHKSDVVREKAESLYAELLQAGVDVLLDDRNER-PGVKFAEMELIGIPHRVVISDRGL 541

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           + G ++ K                           + +  +V+ +K+ L++
Sbjct: 542 AEGKVEYK------------------GRRDTDSTDMTVDTVVNFIKEKLKK 574


>gi|158336193|ref|YP_001517367.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158306434|gb|ABW28051.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 616

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  +              + L+  G RAE+     +  G Q++ +     P+  
Sbjct: 514 WLAPVQIRLLVVSDAQRPYALEVLEQLQQKGFRAEIDQTGER-LGKQIRQSALEKIPVVA 572

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E     L I+     ++   ++       ++ + 
Sbjct: 573 VVGQKEVEAQTLNIRTRHSEEQELLKLPELCEKMQSAID 611



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      +  RIR  I    R  +   G++ + TP +   D L K     D     +F 
Sbjct: 239 GLVFWHPRGARIRQVIETYWRQAHTQGGYELLYTPHMANLD-LWKTSGHFDFYRDSMFD 296


>gi|319892730|ref|YP_004149605.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162426|gb|ADV05969.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|323464237|gb|ADX76390.1| threonyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 645

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 50/161 (31%), Gaps = 17/161 (10%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         V   G    + R +  L                +     ++      
Sbjct: 502 TYIGKDGEHHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPQQVEIIPVNNDLHYDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L++ G+R  +    ++  G +++ A  +  P  ++ G  E     + ++    
Sbjct: 562 ARQIHDELKSQGVRVHID-DRNEKMGYKIREAQMKKIPYQLVVGDKELENNEVNVRQYGS 620

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
             + + E K+   W             +LV  ++  L++ +
Sbjct: 621 KDQKTVE-KDTFIW-------------DLVDEIR--LKKQR 645


>gi|332652580|ref|ZP_08418325.1| hypothetical protein HMPREF0866_00269 [Ruminococcaceae bacterium
           D16]
 gi|332517726|gb|EGJ47329.1| hypothetical protein HMPREF0866_00269 [Ruminococcaceae bacterium
           D16]
          Length = 359

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 64/381 (16%), Positives = 129/381 (33%), Gaps = 56/381 (14%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG-VFSLQDDDGQWISLRYDL 87
           + + +  +YE YG+        E  D    +  ++D    G + +  D DG+  +L+ D+
Sbjct: 2   LEEQLNGLYEQYGYRKFRMSKFEDYDL---YAQNKDFLKSGHIITFTDVDGELKALKPDI 58

Query: 88  TAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM 147
           T  +                          +    G F++ +Q  V++VG     A+AE+
Sbjct: 59  TLSI-------MKNNNGSSEKVYYNENVYRDM--GGTFKEILQVGVESVGQLDPYAEAEV 109

Query: 148 CMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFG 207
             + A                    K L+ + E   L   D     +  L     L    
Sbjct: 110 IALAA--------------------KSLELLSEDCVLDLSD--VSFVSCLLDDMALSGQV 147

Query: 208 LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKGTIAGE 266
            + V   + +              +T E    +   +SI    +   +    +    A  
Sbjct: 148 REQVLEFIAQKNAPGVQALADRGLITIENAQTIAQLMSIYAPLRQGIDQAGQLARNDASW 207

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
               +L +++ ++   G   +R+ +  ++V  ++YY G +++  L               
Sbjct: 208 DALRQLSLVASILEGFGLG-DRVHLDFSLVNSMDYYNGVIFQGFLQNIPF---------- 256

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
            V  GGRYD L  +         G  +G     + +  LE      K+    L+ T   D
Sbjct: 257 PVLSGGRYDNLPRK--------MGKQVGAIGFALYMGRLEPYFGREKQYDADLMLTYGPD 308

Query: 387 SDSLSKYQMYTQMLRTAGIRA 407
           ++ L+    + + LR+ G+  
Sbjct: 309 AN-LADLAAFVEKLRSRGLGV 328


>gi|229079560|ref|ZP_04212097.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228703729|gb|EEL56178.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 640

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 66/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYANEIAHKLAQAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S  I 
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVIA 623



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|229150586|ref|ZP_04278801.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228632895|gb|EEK89509.1| Threonyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 640

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 66/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYANEIAHKLAQAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S  I 
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVIA 623



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|218231087|ref|YP_002367070.1| threonyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218159044|gb|ACK59036.1| threonine--tRNA ligase [Bacillus cereus B4264]
          Length = 640

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 66/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYANEIAHKLAQAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S  I 
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVIA 623



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|70726243|ref|YP_253157.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|68446967|dbj|BAE04551.1| threonyl-tRNA synthetase 1 [Staphylococcus haemolyticus JCSC1435]
          Length = 645

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 48/131 (36%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R E+    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVEIIPVNVD-LHYDYARNLQDELKSQGVRVEID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRKYGSQDQETVE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645


>gi|117925064|ref|YP_865681.1| prolyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|152112926|sp|A0L8I2|SYP_MAGSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117608820|gb|ABK44275.1| prolyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 576

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 40/113 (35%), Gaps = 2/113 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  M  ++SD++ K +  T  L+   +   +     +  G++ 
Sbjct: 462 DENGIIWPLAIAPFEVEVVVMNPNESDAMEKAEEITAQLQAGQLEVLLDDRDERA-GSKF 520

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           K AD    P  ++ G      G+ ++K+   G      +++        +AQ 
Sbjct: 521 KDADLLGAPYRVLVGGRAFKEGVCEVKNRRSGVVEKIPVESVVETLLQWLAQE 573



 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 32/102 (31%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++  ++   +R   +  G   +  P ++ ++ L +         K +  +
Sbjct: 38  GIYTWLPMGLKVLRKVETIVRQEMDRAGAQEVLMPSIQPAE-LWEESGRWKMYGKELLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            D   +         ++ + L R    ++  +       +  
Sbjct: 97  TDRHNRSFCYGPTHEEVISDLVRREIHSYKQLPANFYQIQTK 138


>gi|302035784|ref|YP_003796106.1| threonyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300603848|emb|CBK40180.1| Threonyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 651

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    +           L++ G R E  L  ++  G +++ A++   P  +
Sbjct: 541 WLAPVQAVVLTITDNQQEFAAKIVSTLKSHGFRVEADL-RNEKIGFKIREAEKNKIPYML 599

Query: 434 IQGTGERSRGMLQIK 448
           + G  E   GM+ ++
Sbjct: 600 VVGDKEVQSGMVAVR 614



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I +  R  +   G+D + +P +   D L K     D   + +F+ 
Sbjct: 266 GLVLWHPKGSLIRLLIENFWREQHIKDGYDLVYSPHVARLD-LWKTSGHVDYYRENMFAS 324

Query: 74  QDDDGQWISLRYDLTA 89
              +G    L+     
Sbjct: 325 MKLEGSEYQLKPMNCP 340


>gi|302386675|ref|YP_003822497.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197303|gb|ADL04874.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 653

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 44/152 (28%), Gaps = 3/152 (1%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D   ++ +   +  T        L   ++  E +         V I  +           
Sbjct: 505 DKDGTKKRPYIIHRTSMGCYERTLAWLIEKYEGAFPTWLCPEQVRILPIS--EKYHEYAG 562

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                L+  GI A +    ++  G +++ A     P  ++ G  E   G++ ++    G 
Sbjct: 563 KVAAQLKENGILATVD-ERAEKIGYKIREARLSKLPYMLVVGQKEEEEGVVSVRSRFNGD 621

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVK 486
           E    +          +    I    +    K
Sbjct: 622 EGQHPLSGFIDDICREIRTKEIKKINITEETK 653



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 4/115 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   I +  E  G+   +TPL+   D         D   +G+F L
Sbjct: 260 GLPLLMPKGAKIVQTLQRWIEDEEEKRGYMRTKTPLMAKKDLYI-ISDHWDHYKEGMFVL 318

Query: 74  --QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
             ++ D +  +LR  +T P   YV +                         G   
Sbjct: 319 GNEETDDEVFALRP-MTCPFQYYVYKQSQKSYRDLPCRYGETSTLFRNEDSGEMH 372


>gi|284037200|ref|YP_003387130.1| prolyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283816493|gb|ADB38331.1| prolyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 490

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 73/257 (28%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L + ++   +           +   R          EA+
Sbjct: 170 WQEGHTAHATAEEAKFETRQMLDIYAQFAEEWMALPVVKGTKTANERFAGADDTLCIEAM 229

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP-ATGFSIGISRLIVALKSL---- 365
           +      +       G           +++    +    T + +    +   + +     
Sbjct: 230 MQDGKALQAGTSHFLGQNFAKAFDVQFLNKQNQLDYVWGTSWGVSTRLMGALIMAHSDDD 289

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L    +K +   Q LR AG+  +     +   G + 
Sbjct: 290 GLVLPPKLAPIQVVIVPIYRSEEQLELLSAKIKPLVQELRKAGVSVKYDDSDANKPGWKF 349

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIPIS 479
              + R  P+ +  G  +   G ++I  +DL   +                    T+P  
Sbjct: 350 AEYELRGVPVRLAMGGRDLENGTVEIARRDLKTKE--------------------TVPFE 389

Query: 480 ELVSTVKKILQENKEEI 496
            L   +K +L + ++ I
Sbjct: 390 GLTEHIKNLLDDIQQTI 406


>gi|171780136|ref|ZP_02921040.1| hypothetical protein STRINF_01924 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281484|gb|EDT46919.1| hypothetical protein STRINF_01924 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 697

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/388 (10%), Positives = 102/388 (26%), Gaps = 18/388 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +          P+   + +         + D+       +  +  +  M  
Sbjct: 328 RYIVDK--EVESGYLHVYTPPLASVDLYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNC 385

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 386 PHHIQVYKYHVHSYRELPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQ 445

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +       D  +  NLT E    +      D  K   +           +   +E+
Sbjct: 446 EEFQKALQL-IIDVYEDFNLT-EYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEM 503

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               E     G  +         V+        +    L F +                 
Sbjct: 504 --GVEYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFGL----------- 550

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L                +      +   +  
Sbjct: 551 TYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTVIPVSNEAHVDY 610

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                ++LR  G+R ++    ++    +++ +  +  P  +I G  E +   + ++    
Sbjct: 611 AWEIAKVLRDKGVRVDVD-ERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGS 669

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
            +  +  I        A + + + P +E
Sbjct: 670 KQTHTESIDEFVENILADIDRKSRPDAE 697


>gi|187607298|ref|NP_001120088.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Xenopus
           (Silurana) tropicalis]
 gi|165971208|gb|AAI58530.1| LOC100145097 protein [Xenopus (Silurana) tropicalis]
          Length = 466

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 45/167 (26%), Gaps = 10/167 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R   P G        +R   +++  I    ++ G   I+ P L  S +L +  
Sbjct: 65  MIKAGLIRPSSP-GCFHYLPFTVRAMEKLIRLIDKEMQDIGGQKIDMPTL-SSAALWRQS 122

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D   K +F L D   Q   L       +   VA                   +    
Sbjct: 123 GRWDLMGKELFRLMDRHNQEYCLGPTHEEAVTHLVASEGGINNKELPLLLYQITRKFRDE 182

Query: 121 GPG--------RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                       F        D    SA      +C    +   A+G
Sbjct: 183 QRPCFGLLRGREFYMKDMYTFDISDESAYETYRNVCDAYTNIFRALG 229


>gi|38234063|ref|NP_939830.1| prolyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|81829888|sp|Q6NGM7|SYP_CORDI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|38200325|emb|CAE50010.1| prolyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 585

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 52/180 (28%), Gaps = 26/180 (14%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG- 376
           E       G          ++     + +P  G        ++A+ + +           
Sbjct: 426 EVGHIFQLGRKYTEAFDVQILDESGKRAIPTMGSYGIGVSRLMAVLAEQRHDETGLNWPL 485

Query: 377 -----PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D +++         L + GI          + G + K A+    P 
Sbjct: 486 EVAPYQVHVVVANKDKEAIEAGDALVAALDSHGIEVLFDDRPKVSPGVKFKDAELLGMPF 545

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            ++ G      G ++++   +G+E                  + +   E+V TV   L  
Sbjct: 546 VVVLG-RAFKDGNIELR--ERGQET-----------------VLVSADEIVDTVVAKLNR 585



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 44/160 (27%), Gaps = 14/160 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRP 66
               G        +R   ++   +R   +  G   +  P L   E  +   ++    D  
Sbjct: 36  RTAPGVYTWLPLGLRTLRKVETVVREEMDAIGAQELLFPALLPREPYEQTHRWTEYGD-- 93

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLAR-YVAENFD---TIVFPCRTYRIGPVFRNEK 119
              +F L+D  G    L     ++ A   +   +   D   T+      YR     R   
Sbjct: 94  --SLFRLKDRKGGDYLLGPTHEEMFASAVKDMYSSYKDFPVTLYQIQTKYRDEERPRAGI 151

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D   +  E +           L+ +G
Sbjct: 152 LRGREFVMKDSYSFDMSDAGLEDSYQRHREAYQRILDRLG 191


>gi|70728636|ref|YP_258385.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|114152231|sp|Q4KH98|SYP_PSEF5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68342935|gb|AAY90541.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 571

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/151 (11%), Positives = 43/151 (28%), Gaps = 5/151 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P  + ++ L +     +  
Sbjct: 31  MIRKLASGLYTWLPMGLRVMRKVEAIVREEMNAAGALEVLMPSTQPAE-LWQESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +   +D  G+         ++   LAR    ++  +       +        +   G
Sbjct: 90  GPELLRFKDRHGRDFCAGPTHEEVITDLARNELSSYKQLPLNLYQIQ-TKFRDEIRPRFG 148

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADT 154
             R       D     A+ A  ++       
Sbjct: 149 LMRGREFIMKDAYSFHADQASLQVTYDRMHQ 179


>gi|229190445|ref|ZP_04317445.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228593058|gb|EEK50877.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 640

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 66/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYANEIAHKLAQAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S  I 
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVIA 623



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|206971420|ref|ZP_03232370.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228952703|ref|ZP_04114777.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229069894|ref|ZP_04203176.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|206733405|gb|EDZ50577.1| threonyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228713297|gb|EEL65190.1| Threonyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228806979|gb|EEM53524.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 640

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 66/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYANEIAHKLAQAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S  I 
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVIA 623



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|121612820|ref|YP_999926.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166223331|sp|A1VXT5|SYT_CAMJJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|87250382|gb|EAQ73340.1| threonyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 602

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 43/95 (45%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 VGIVPIGEAHIAYAKEIQKELLELNIDSEVY-EKNESLSKKIRIAEKQKLPMILVLGDDE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             +  + ++D    ++ +  +       + +++++
Sbjct: 566 VVKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600


>gi|188587611|ref|YP_001919651.1| prolyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|226699131|sp|B2UY89|SYP_CLOBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188497892|gb|ACD51028.1| prolyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 570

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     ++   ++ D IR      G        +  ++ L +     D  
Sbjct: 31  MIRKMASGIYNYMPLGLKALKKVEDIIREEMNEAGAQEFLASAMIPAE-LWQSSGRWDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F ++D + +   L  
Sbjct: 90  GAEMFRVKDRNERDFCLGP 108


>gi|153955810|ref|YP_001396575.1| threonyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856177|ref|YP_002473299.1| hypothetical protein CKR_2834 [Clostridium kluyveri NBRC 12016]
 gi|189083603|sp|A5N258|SYT_CLOK5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783517|sp|B9E5W0|SYT_CLOK1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146348668|gb|EDK35204.1| ThrS [Clostridium kluyveri DSM 555]
 gi|219569901|dbj|BAH07885.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 637

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 73/243 (30%), Gaps = 4/243 (1%)

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A+   + ID++ +F  I   +   EL    + ++  ++ +       +   K      +I
Sbjct: 393 ADEIIKVIDLIDNFYKIFGFEYFVELSTRPEDSMGSDEDWEAATEGLKNALKMVGLDYKI 452

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                   G +       + I         Q                   + +   +   
Sbjct: 453 NEGDGAFYGPKIDFHLK-DCIGRTWQCGTVQLDFQMPEKFDLNYIGADGEKHRPVMIHRV 511

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
            F      + + ++    +      + PV +  M+             + L+   IR E 
Sbjct: 512 VFGSIERFIGILIEHYAGAFPAW--IAPVQVQVMNITDAQADYVAEVAKTLKENNIRVEC 569

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            +  ++  G +++ A     P  II G  E     + ++   +G   +  +++     + 
Sbjct: 570 DI-RNEKIGYKIREAQMHKVPYMIILGDKEMKDKNISVRSRKEGDIGAMSLEDFILKLKE 628

Query: 470 RVA 472
            + 
Sbjct: 629 EID 631



 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + +  R ++    +  I TP++   +   +     D   + ++  
Sbjct: 261 GFPFFHPKGMVIRNTLQNFWREMHYKADYSEIMTPIILNEELWHRS-GHWDHYKENMYFT 319

Query: 74  QDDDGQWISLRYDLTAP 90
           + DDG   +++      
Sbjct: 320 KIDDGN-YAIKPMNCPG 335


>gi|291060195|gb|ADD72930.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 582

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/454 (9%), Positives = 110/454 (24%), Gaps = 86/454 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   +   I   +R +    G+  + TP +       +     D+    ++ L + +
Sbjct: 206 WHPEGWTLYVAIQQYLRRVMHEDGYAEVHTPFVMPQSLWERS-GHWDKYRANMY-LTEGE 263

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+            +   +                 +                  
Sbjct: 264 KRSFALKPMNCPGHVEIFKQKTRSYRDLPLRLSEFGSCTRNEPSGSLHGVMRVRGFVQDD 323

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +     +A++   +      +        +  +     + I  K     + ++ +     
Sbjct: 324 AHIFCTEAQIASEVTRFCRLL------ARVYADFGFAQEQIRVKFSTRPEQRIGDDATWD 377

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           RA   L                     +  + A L+ E      +F    LE ++ +  E
Sbjct: 378 RAERAL--------------------AEACEAAGLSYEHAPGEGAFYGPKLEFALIDTLE 417

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
             +    G    +  +   E +       +  +    I+      +   +  IL      
Sbjct: 418 --REWQCGTIQVDYQLPSCERLNAEYVGEDNQRHMPVILHRTVIGSLERFIGILI----- 470

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
                           Y G    +                                    
Sbjct: 471 --------------EHYGGAFPPWLAPVQAVV---------------------------- 488

Query: 378 VLITTMDHDSDSLSKYQMYTQMLR-TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           + +     +       ++  + LR  A + AE           +++ A  +  P  +I G
Sbjct: 489 IPVAPAFLEYAQHVARELCARSLRVQADVSAE-------RMNAKIRTAQTQKVPYLLIVG 541

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             E     + ++    G + S  +    ++  A+
Sbjct: 542 ERELRAQQVAVRP-RTGPQHSMGLSAFSTFLLAK 574


>gi|297571384|ref|YP_003697158.1| threonyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931731|gb|ADH92539.1| threonyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 670

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 44/130 (33%), Gaps = 22/130 (16%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +  +    +   D  +D L         LR  G+R E+     + F  +++ A 
Sbjct: 563 GAFPAWLAPVQVRCVPVADAFNDYLD---SVADKLRAQGVRVEVDKSDDR-FPKKIRNAS 618

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           +   P  +I G  +   G +  + +  G + +                  + + E V+ +
Sbjct: 619 KDKVPFTLIAGGEDMEAGAVSFR-MRDGSQDNG-----------------VAVDEAVARI 660

Query: 486 KKILQENKEE 495
              ++ +  +
Sbjct: 661 VDHIRNHTNQ 670


>gi|242373870|ref|ZP_04819444.1| glycyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348424|gb|EES40026.1| glycyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 463

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/219 (7%), Positives = 51/219 (23%), Gaps = 4/219 (1%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  + +       +  +                   +            +   ++     
Sbjct: 248 QWLKDLNINEENMRLRDHDEDELSHYSN-ATTDIEYRFPFGWGELWGIASRTDFDLQKHS 306

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               E  K     +      Y    S    +   A          +   K   +  +   
Sbjct: 307 EHSGEDFKYHDPETNEKYVPYCIEPSLGADRVTLAFLCDAYEEEGVEGSKDARTVMHFHP 366

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P     +       S+     + L +      +    S++ G + +  D    P  I
Sbjct: 367 ALAPYKAAVLPLSKKLSSEAIKIFEQL-SQNFS--IDFDESQSIGKRYRRQDEIGTPYCI 423

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + ++D    +++   I   E++   ++ 
Sbjct: 424 TFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAEKIK 462


>gi|150021207|ref|YP_001306561.1| threonyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793728|gb|ABR31176.1| threonyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 636

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +      +S  +    +L   G+R  +    ++  G +++ A     P  I
Sbjct: 536 WLSPIQVVVLPVSDKYVSYARKIYSILMENGVRVSVD-DRNETLGYKIREAQINKIPYMI 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           I G  E   G + I+     ++    ++         + + 
Sbjct: 595 IVGEREEESGKISIRSRDGVEQKDIAVEEFLDLLSVSIKER 635



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 43/141 (30%), Gaps = 9/141 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N ++   R+++E YG+  + TPL+       +     D   + ++  
Sbjct: 263 GMPIFLPKGTIILNELMAFSRSLHEEYGYTEVMTPLVMNVKLWYQS-GHWDHYKENMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + +    +++             +         +YR  P+   E     R+ +      
Sbjct: 321 TEKEEVEYAIKPMNCPG-------HILIYKNNVVSYRDLPIRLFEFGKVHRYERSGVLHG 373

Query: 134 DNVGSSAETADAEMCMMMADT 154
                +    DA +       
Sbjct: 374 LLRVRAFTQDDAHIFCRQDQI 394


>gi|82701584|ref|YP_411150.1| prolyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|114152221|sp|Q2YBW3|SYP_NITMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|82409649|gb|ABB73758.1| prolyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 569

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 9/103 (8%), Positives = 35/103 (33%), Gaps = 4/103 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +++  ++ + +R   +  G   +  P ++ ++ L +     D     +  
Sbjct: 37  SGLYTWMPLGLKVLRKVENIVREEMDAAGALELLMPAVQPAE-LWRETGRWDVFGPQMLK 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           ++D   +         ++   +AR   +++  +       +  
Sbjct: 96  IRDRHERDFCFGPTHEEVITDIARREIKSYRQLPLNFYQIQTK 138



 Score = 40.2 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 33/130 (25%), Gaps = 21/130 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V+I  +    +++  ++ +     L + GI   +     +  G  
Sbjct: 457 DERGIIFPAAMAPFQVVIIPIGLKKNAEVRAEAEKLYATLSSVGIEVLLDDRDDR-PGVM 515

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  ++ G      G                  N E           +P+ E
Sbjct: 516 FADMELIGIPHRVVVGERGLKEG------------------NAEYRGRRDEKSEVVPLPE 557

Query: 481 LVSTVKKILQ 490
           +   +K  L 
Sbjct: 558 IADFIKSKLA 567


>gi|15674621|ref|NP_268795.1| threonyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71910240|ref|YP_281790.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|22654136|sp|Q9A115|SYT_STRP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13621733|gb|AAK33516.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes M1 GAS]
 gi|71853022|gb|AAZ51045.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 647

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/378 (9%), Positives = 99/378 (26%), Gaps = 16/378 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +         Q D+  V    +  +  +  M       V 
Sbjct: 282 KELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVY 341

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 342 KNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRAL 401

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   +     ++  E+ +   +  K   +  +  +  
Sbjct: 402 QLIIDVY---ADFNLTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALD-EMGVDYF 457

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 458 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 506

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 507 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKT 566

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+RA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 567 LRDRGVRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKTTHTES 625

Query: 460 IKNNESWREARVAQITIP 477
           ++       A +A+ + P
Sbjct: 626 VEEFVENILADIARKSRP 643



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 75/323 (23%), Gaps = 25/323 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F +
Sbjct: 260 GLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPV 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N           I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVRSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    I      I    ++ L  I++            
Sbjct: 359 GMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNLTDYRF 418

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           RL      D    +    +             +          +       L I ++ ++
Sbjct: 419 RLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDIQVKTAL 478

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               E +                 + +   G     + I   ++  +E +T  + E   G
Sbjct: 479 -GNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKG 535

Query: 313 FPVMNEKQKPVVFGSVGGGGRYD 335
                     V    +      D
Sbjct: 536 AFPTWLAPHQVTVIPISNEAHID 558


>gi|163940157|ref|YP_001645041.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163862354|gb|ABY43413.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 639

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 68/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +EL  ++   S   K  
Sbjct: 396 IEDEIQSVLAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAELALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AGIR E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYANRIADKLAQAGIRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E     + ++    G+E S  ++
Sbjct: 575 DIRDEK-LGYKIREAQMQKVPYVLVIGDKEMESEAVNVR--KYGEEKSEVVE 623



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 33/114 (28%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I   Y +  + TP +   +   K           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQELWEKS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDHKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|291538408|emb|CBL11519.1| prolyl-tRNA synthetase, family II [Roseburia intestinalis XB6B4]
          Length = 567

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/548 (10%), Positives = 138/548 (25%), Gaps = 99/548 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
               + RI ++I   +R   +      +  P++  + SL +     +   + +    D +
Sbjct: 43  YLPLK-RITHKIEQILREEMDKLDGQEVSFPVVMPA-SLWEESGRYESVGEELLRFTDRN 100

Query: 78  GQWISLRYDLT-----APLARYVAENFDTIVFPCRTYR--------------------IG 112
              + L   +T       L R  A++++   F     +                    + 
Sbjct: 101 NAKMVLG--MTHEEAAVHLVREYAKSYNKYPFMIYQIQTKFRDEARPRAGLIRVREFTMK 158

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH------ 166
             +          + + +C              E+  + +D+    G   +++       
Sbjct: 159 DAYSFHTSQEDLNQYYEKCHKAYERIFERAGIPEVVSVASDSGMMGGSLSHEFMLLTPVG 218

Query: 167 ---IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
              I + N       +E      D   +     L  +   D   ++ +    G+   ++ 
Sbjct: 219 EDSIVLCNECDFRANMEAAENISDIARDAVSAELEKVHTPDIHTIEDICKFFGDETCNSC 278

Query: 224 GDFTKGANLTSEQI------------DIMVSFLSIDLEKSMHELYELV----------KG 261
                  NL    +              +V++L  ++  ++      +          K 
Sbjct: 279 KAVVYQKNLDDTYVVVFIRGDLEINETKLVNYLKDEIHPAIITEECGLNAGYIGPVGLKI 338

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                  ++  +     +               + R +       +       +  +  K
Sbjct: 339 NGDAIVLYDRSLENRNNLSCGANEDEYHYKGLDMQRDVPDAEYHDFAKAYEGGICPKCGK 398

Query: 322 P--------VVFGSVGGGGRYDGLVSRFKGQNV-----PATGFSIGISRLIVAL------ 362
                     V      G +Y   +             P  G        + A       
Sbjct: 399 KTIRISRGIEVGNIFQLGDKYTKAMKMTYVDQNGESKTPIMGCYGIGVGRLAAAVCEAHH 458

Query: 363 KSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  +  D  +         + L+  GI   ++   + + G   
Sbjct: 459 DEYGPIWPKSIAPWQVHLCAVRADNEEVRKFADDLYEKLQEMGIEV-IYDDRTVSAGVMF 517

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             AD    PL +I       +G++++                      +  Q  + + E 
Sbjct: 518 SDADLLGIPLRVIVSPRNMKQGVVEV------------------ASRDKTLQTQVKMEEA 559

Query: 482 VSTVKKIL 489
              VKK L
Sbjct: 560 AEQVKKYL 567


>gi|15639823|ref|NP_219273.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026061|ref|YP_001933833.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094415|sp|O83809|SYT_TREPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689347|sp|B2S475|SYT_TREPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3323150|gb|AAC65804.1| threonyl-tRNA synthetase (thrS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018636|gb|ACD71254.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 592

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/454 (9%), Positives = 110/454 (24%), Gaps = 86/454 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   +   I   +R +    G+  + TP +       +     D+    ++ L + +
Sbjct: 216 WHPEGWTLYVAIQQYLRRVMHEDGYAEVHTPFVMPQSLWERS-GHWDKYRANMY-LTEGE 273

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+            +   +                 +                  
Sbjct: 274 KRSFALKPMNCPGHVEIFKQKTRSYRDLPLRLSEFGSCTRNEPSGSLHGVMRVRGFVQDD 333

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +     +A++   +      +        +  +     + I  K     + ++ +     
Sbjct: 334 AHIFCTEAQIASEVTRFCRLL------ARVYADFGFAQEQIRVKFSTRPEQRIGDDATWD 387

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           RA   L                     +  + A L+ E      +F    LE ++ +  E
Sbjct: 388 RAERAL--------------------AEACEAAGLSYEHAPGEGAFYGPKLEFALIDTLE 427

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
             +    G    +  +   E +       +  +    I+      +   +  IL      
Sbjct: 428 --REWQCGTIQVDYQLPSCERLNAEYVGEDNQRHMPVILHRTVIGSLERFIGILI----- 480

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
                           Y G    +                                    
Sbjct: 481 --------------EHYGGAFPPWLAPVQAVV---------------------------- 498

Query: 378 VLITTMDHDSDSLSKYQMYTQMLR-TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           + +     +       ++  + LR  A + AE           +++ A  +  P  +I G
Sbjct: 499 IPVAPAFLEYAQHVARELCARSLRVQADVSAE-------RMNAKIRTAQTQKVPYLLIVG 551

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             E     + ++    G + S  +    ++  A+
Sbjct: 552 ERELRAQQVAVRP-RTGPQHSMGLSAFSTFLLAK 584


>gi|320547252|ref|ZP_08041545.1| threonine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448140|gb|EFW88890.1| threonine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 697

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 45/148 (30%), Gaps = 1/148 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L                +      +   +  
Sbjct: 551 TYVGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTVIPVSNEAHVDY 610

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                ++LR  G+R ++    ++    +++ +  +  P  +I G  E +   + ++    
Sbjct: 611 AWEVAKLLRDKGVRVDVD-ERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGS 669

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
            +  +  I        A + + + P +E
Sbjct: 670 KQTHTESIDEFVENIMADIDRKSRPDAE 697


>gi|325982765|ref|YP_004295167.1| prolyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532284|gb|ADZ27005.1| prolyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 569

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/154 (10%), Positives = 38/154 (24%), Gaps = 8/154 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +R+  +I + IR    + G   I  P ++ ++ L +     D     +  
Sbjct: 37  SGLYTWMPLGLRVLRKIENIIREEMNSSGAVEILMPAIQPAE-LWQETGRWDVFGLQMLK 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRF 125
           ++D             ++     R   +++  +       +                  F
Sbjct: 96  IKDRHKHDFCFGPTHEEIITDTVRKEIKSYRQLPLNFYQIQTKFRDEIRPRFGVMRAREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                        S       M    +     +G
Sbjct: 156 IMKDAYSFHTNEDSLMQTYQLMYETYSRIFTRIG 189


>gi|254785039|ref|YP_003072467.1| proline--tRNA ligase [Teredinibacter turnerae T7901]
 gi|259511626|sp|C5BPN9|SYP_TERTT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|237684457|gb|ACR11721.1| proline--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 574

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 7/73 (9%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +     +R+  ++ + +R   +  G   +  P+++ ++   +      +    +  
Sbjct: 37  SGLYNWLPLGLRVLRKVENIVRQEMDKSGAQEVLMPVVQPAEIWQES-GRWQQYGPELLR 95

Query: 73  LQDDDGQWISLRY 85
           + D   +   L  
Sbjct: 96  INDRHDRAFCLGP 108



 Score = 39.8 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 26/92 (28%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +      +TAGI   +        G  L   +    P  ++ G    
Sbjct: 482 INMHKSDAVKEACETLYDQCQTAGIDVLLMDEPKARLGAMLADVELVGIPHRVVIGDRGL 541

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +G ++ K     +       +   +   ++A
Sbjct: 542 EQGNIEYKGRRDAESQEVAAASLFEFLREKIA 573


>gi|222110646|ref|YP_002552910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254783520|sp|B9MHX8|SYT_DIAST RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221730090|gb|ACM32910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 639

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 67/258 (25%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  ++ P +    +L +     D+    +F+ 
Sbjct: 261 GTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQI-LDKTLWEKTGHWDKYRDNMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKRDYALKPMNCPG-------HILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +       L               N    + I +          ++ 
Sbjct: 372 IMRVRGFTQDDGHIFCTEDHILAECTAYTALLQKVYKNFGFHNIIYKVATRPEARIGSDE 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                + DK +   ++ ++    E           G  +     D +         +   
Sbjct: 432 -----SWDKAEHALMESLRASGCEFEIAPGDGAFYGPKIEYTLKDAIGRQWQCGTMQVDF 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 487 SMPERLDAEYVGEDGGRH 504


>gi|116333673|ref|YP_795200.1| threonyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269640|sp|Q03RK3|SYT_LACBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116099020|gb|ABJ64169.1| Threonyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 647

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/148 (12%), Positives = 41/148 (27%), Gaps = 3/148 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L  +             +      +    + 
Sbjct: 502 HYVGADGEEHRPVMIHRGLVSTMERFTAYLTEIYKGAFPTWLAPKQVTIIPVSEEKHGAY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  L+ A IR  +     +  G  ++ A     P  ++ G  E S G + ++    
Sbjct: 562 ADKLAAELKAADIRVNVD-KRGEKMGYLIRDAQTHKIPYTLVVGEDEMSNGSVSVR--KY 618

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
           G+  +  + ++   +E      +     
Sbjct: 619 GENQTTSMSSDAFVKEILADIASYSREN 646



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+  + TP+L   D   K         + +F  
Sbjct: 262 GLPYWMPNGATIRRTIERYIIDKEVSNGYQHVYTPVLANLDLY-KQSGHWAHYREDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 321 MDMGDGEMLELRPMNCPSHIQVYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +     +  +M        IK   + +   + K  +   +   + 
Sbjct: 381 MTLNDGHTFVAPEQIQDEFKSILDLMVKVYADFDIKDYTFRLSYRDPKNTEKYFDDDEMW 440

Query: 186 GDDKLN 191
            + +  
Sbjct: 441 NNAQAM 446


>gi|308177541|ref|YP_003916947.1| threonine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307745004|emb|CBT75976.1| threonine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 671

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 41/118 (34%), Gaps = 19/118 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                L+ AG+R E+   S + F  +++ A +   P  +
Sbjct: 568 WLSPVQVRAIPVAEAFNDYLGEVVAKLKAAGVRVELDDSSDR-FPKKIRNASKDKIPFVL 626

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           I G  +     +  +    G +                 +  +P+ + V+ + + ++ 
Sbjct: 627 IAGGEDADANAVSFR-FRDGSQ-----------------ENQVPVDDAVARIVEAIKS 666


>gi|312195504|ref|YP_004015565.1| prolyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311226840|gb|ADP79695.1| prolyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 580

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 38/134 (28%), Gaps = 6/134 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +R+  RI   +R      G   +  P L   +   +           
Sbjct: 44  KAASGIYSYLPLGLRVLRRIEAVVRQEMAAAGCQELLMPALMPRELWDRS-GRWADYGDL 102

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +F + D  G    L     +L   L     E       P R ++I   +R+E        
Sbjct: 103 MFRVVDRKGTEFCLGPTHEELITSLV--ANELGGHRDLPLRVFQIQTKYRDELRPRSGLV 160

Query: 127 QFIQCDVDNVGSSA 140
           +     + +  +  
Sbjct: 161 RSRDFVMKDAYTFH 174



 Score = 37.9 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 30/107 (28%), Gaps = 2/107 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +  +    D     +    ML   G+   +   S  + G +  
Sbjct: 471 DEHGIRWPAELAPYDVQVIPLGRRVD-EDLVRSVADMLAGVGLEVLVDDRSGASAGVKFA 529

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            AD    P  ++ G    + G+ +++   +       +    +  + 
Sbjct: 530 DADLIGAPFQVVLGRR-AAEGIAELRTRDRSTVTEVALTELTNVIDG 575


>gi|251778178|ref|ZP_04821098.1| proline--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082493|gb|EES48383.1| proline--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 570

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     ++   ++ D IR      G        +  ++ L +     D  
Sbjct: 31  MIRKMASGIYNYMPLGLKALKKVEDIIREEMNEAGAQEFLASAMIPAE-LWQSSGRWDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F ++D + +   L  
Sbjct: 90  GAEMFRVKDRNERDFCLGP 108


>gi|170290849|ref|YP_001737665.1| glycyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174929|gb|ACB07982.1| glycyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 508

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/510 (10%), Positives = 121/510 (23%), Gaps = 68/510 (13%)

Query: 12  PRGFADCPTKEIRIRNRILDSIR-NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           P GF       +R++ +I+   R  I    G + IETP +            E   +K +
Sbjct: 30  PAGFYTYGPLGVRMKEKIIGLWRREIVIKEGVNEIETPNVLPIKVFEASGHLEHFFDKLI 89

Query: 71  --------FSLQDD--------DGQWISLRYDLTAPLARYVAENFDTIVFP--CRTYRIG 112
                   F   D         +     L  D    L + V EN              + 
Sbjct: 90  ECRRCHSKFR-IDKLLEEALGIEENLEGLPDD---QLLKMVLENNLRCPNCGAFDWGDLR 145

Query: 113 PV---------FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
                          +       +  Q  V     +      ++   +         + +
Sbjct: 146 NFNLMFTLAVGAEASEPNAALRPETTQGSVVEFRKTFTVMRGKLPFALGQVGRVFRNEIS 205

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
                I  R+     ++      +     R  +   +D   +F  +  +           
Sbjct: 206 PRRALIRMREFQQLEVQIFFDPENPDELYREKLEPFLDYKLRFLRREDRESGRIVEIPAR 265

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                G          + S ++  L        E +   +   +    +           
Sbjct: 266 EALMSGY--------TVNSLITYWLVAYQRFFNETLGFPLERLRYRELVEGEKAHYSLVH 317

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
           ++          +  +       Y       +    +   +   +        L+     
Sbjct: 318 WDLEVYTEDLGWIELVNNAYRTDY------DLSGHMRVSGIDLRIAIPESDRKLLPHMYE 371

Query: 344 QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLR 401
            ++      +    L              + + P+ +         +  SK +     L 
Sbjct: 372 PSIGVDRVILHELMLAYREDEERVWLQLPRSIAPIEVGVFPLLKRDELPSKAREIYHELI 431

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             GI A  F   S   G + +  D    PL +           + ++D            
Sbjct: 432 NEGIIA--FYDDSGTIGRRYRRMDEIGTPLCVTIDYQTLEDDTVTLRDRDT--------- 480

Query: 462 NNESWREARVAQITIPISELVSTVKKILQE 491
                    + Q+ +   EL + V+K L  
Sbjct: 481 ---------MMQVRVRREELPTKVRKFLNS 501


>gi|104783084|ref|YP_609582.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123380820|sp|Q1I6D7|SYP_PSEE4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|95112071|emb|CAK16798.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 571

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVMRKVEAVVREEMNAAGALEVLMPSIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L+D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRLKDRHDRDFCVGPTHEEVITDLARNELSSYKQLPLNMYQIQTK 138


>gi|75908999|ref|YP_323295.1| threonyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75702724|gb|ABA22400.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Anabaena
           variabilis ATCC 29413]
          Length = 615

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      L   +     LR+ GIRAE+     +  G  ++ A++   P+  
Sbjct: 513 WLAPVQARLLPVGEAQLDFTKDVVAKLRSLGIRAEVDTSGDR-LGKLIRNAEKDKIPVMG 571

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     L I+  A G+  +  +       +  +A   
Sbjct: 572 VVGAKEVETNSLSIRTRASGELGAIPVDEVVQKMKDAIANYE 613



 Score = 37.1 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ +   ++      G+ P+ TP +   D   K      +  + +F L
Sbjct: 229 GLPLWTPKGTLLRSTLEQFLQQEQLKRGYLPVVTPHIARVDLF-KTSGHWQKYKEDMFPL 287

Query: 74  Q 74
            
Sbjct: 288 M 288


>gi|323356826|ref|YP_004223222.1| prolyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323273197|dbj|BAJ73342.1| prolyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 600

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 1/100 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +     D+ +    +  +  L  AG+          + G +  
Sbjct: 495 DEKGLIWPASVAPFDVHVVATGRDAAAFELAEQVSADLEAAGLDVLYDDRPKVSPGVKFG 554

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            A+    P  +I G    + G +++ D   G+  +  + +
Sbjct: 555 DAELVGIPRILIVG-RGAAEGQVELWDRRTGERETLPVAD 593



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                ++++ +I   +R    N G   +  P L   E  +  G++    D     +F LQ
Sbjct: 46  WLPLGLKVKAKIETVVREEMANAGAFEVHFPALLPREPYEVTGRWEEYGDA----LFRLQ 101

Query: 75  DDDGQWISLRY 85
           D  G    L  
Sbjct: 102 DRKGADYLLAP 112


>gi|291566329|dbj|BAI88601.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 622

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV++  +          +   Q L+   IRAE+   + +  G Q++  +    P+ +
Sbjct: 519 WLAPVMVRVLVVSDRFRDYAKSIVQSLKQQNIRAEVD-NTGERLGKQIRACELEKIPVTV 577

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E     L ++  ++G 
Sbjct: 578 VIGQRELDNQSLSVRTRSRGD 598



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 2/109 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R  I D  R  +   G++ + TP +    +L K     D   + +F  
Sbjct: 244 GLVFWHPKGSRMRLLIEDYWRQAHLQGGYELLYTPHIANL-ALWKTSGHYDFYRENMFDQ 302

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
            + + Q   L+             +  +    P R   +G V+R E+ G
Sbjct: 303 IEIENQSYQLKPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYERSG 351


>gi|77464352|ref|YP_353856.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|114152244|sp|Q3IZS9|SYP_RHOS4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77388770|gb|ABA79955.1| Prolyl-tRNA synthetase, class IIa [Rhodobacter sphaeroides 2.4.1]
          Length = 445

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/458 (9%), Positives = 112/458 (24%), Gaps = 63/458 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  RI   +       G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQQAAGIYSWLPLGFKVLKRIEQIVHEEQIRAGHIPLLMPTLQPAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  + D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GEEMLRITDRHKRDMLYGPTNEEMITDIFRSHVSSYKDLP--LTLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  +     ++ +       +  +             R  L  I     
Sbjct: 148 GVMRGREFLMKDGYNFDLDYESAIHAYNRHMVSYL---------RTYERMGLQAI----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      ++   G    DN+ +F   A+    +       
Sbjct: 194 --------------------------PMRAASGPIGGDNTHEFLVLASTGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D   +  +  + V       +    +   +    ++    +                
Sbjct: 221 VFYDAAITDLKFGDRVVNYDDRAECEAIVKEWTAPYARTDETHDEAVFGQIPEERRRSSR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F     +       +       DG        +       +  + +  +  
Sbjct: 281 GIEVGQIFYFGTKYSEPMGANVVTA------DGSRVPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAE-MFLGSSKNFGNQL 421
                           I  +     S     +   + L   G+  E ++    +  G + 
Sbjct: 335 DKGIIWPEGVTPFHAGIVNLKQGDSSTDLACEALYRDLSARGL--EPLYDDRDERAGAKF 392

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
              D    P  I  G    S G +++ +   G+     
Sbjct: 393 ATMDLIGLPWRITVGPRGISAGKVELTNRRTGESEEMS 430


>gi|302550176|ref|ZP_07302518.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302467794|gb|EFL30887.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 658

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/420 (12%), Positives = 108/420 (25%), Gaps = 65/420 (15%)

Query: 90  PLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
            + R V E                     + +         +    +       E  D  
Sbjct: 288 GIIRRVMEDYSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYY 347

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  M       +   R   +  +  R    G + +    G      R       D     
Sbjct: 348 LKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC 407

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
             + +   L     D +  F  G        D  +   + D EK        V    A E
Sbjct: 408 TREQMAEEL-----DKTLTFVLGLLRDYGLTDFYLELSTKDPEK-------FVGSDEAWE 455

Query: 267 KGFNELVVISELV----------RKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPV 315
           +    L  ++E                     ++    I R  +  T    +     F +
Sbjct: 456 EATETLRQVAEKQGLPLVPDPGGAAFYGPKISVQTKDAIGRTWQMSTIQLDFNLPERFDL 515

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKE 374
                       V                 +    F        V L+    +    +  
Sbjct: 516 EYTGADGAKQRPVM----------------IHRALFGSIERFFAVLLEHYAGAFPAWLAP 559

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
           +  V I   D   + L K+    +     G+R E+   S +    +++ A ++  P  +I
Sbjct: 560 VQAVGIPIGDAHVEYLEKFAAAAKR---KGLRVEVDSSSDR-MQKKIRNAQKQKVPFMVI 615

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
            G  + S G +  +    G + +                  IP  E ++ ++K+++E  +
Sbjct: 616 AGDEDMSHGSVSFRY-RDGSQENG-----------------IPFDEAIAKIQKVVEERAQ 657


>gi|251798759|ref|YP_003013490.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247546385|gb|ACT03404.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 645

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 61/220 (27%), Gaps = 9/220 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++R  +   I ++ E  G++ + TP+L   +   K     +  ++ +F +
Sbjct: 265 GLPLWLPNGAKVRRTLERYIVDLEERLGYEHVYTPVLANVELY-KISGHWEHYSEDMFPV 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +        R+YR  PV   E     R+        
Sbjct: 324 MALDNEELVLRPMNCP-------HHMMVYKSDMRSYRDLPVRIAEMGTMHRYEMSGALT- 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                 A T +        D ++    +  +    +     +     ++         + 
Sbjct: 376 GLHRVRAMTLNDAHIFCRPDQIKEEFARVVNLIRKVYEDFGIKEYRFRLSYRDPQDTEKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                  +   +   + V+ L              G  L 
Sbjct: 436 FQNDEMWEMSQRMLREVVEELGLPFFEAEGEAAFYGPKLD 475



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +   +   +  +   + L+ AGIR E  L  ++  G +++ A     P  +
Sbjct: 544 WLSPVQAKVIPVSTAYEAYAREVEEKLQLAGIRVESDL-RNEKLGYKIREAQLEKLPYML 602

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E   G + ++   +G   ++ +       +  +A  TI
Sbjct: 603 VVGENEAQSGSVSVRKRGEGDIGAKPVAELVELLQNEIATKTI 645


>gi|325969299|ref|YP_004245491.1| threonyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323708502|gb|ADY01989.1| threonyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 621

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 73/267 (27%), Gaps = 14/267 (5%)

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
           L      +   FTK      +    +   +  ++ K      + V      ++ ++E   
Sbjct: 338 LRRFYMPDLHIFTKDLKNAMDVALKLHEIIFREVRKL---GRDYVSLYNVTKQFYDEHRD 394

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE---------AILGFPVMNEKQKPVVF 325
               + K       I+I                          A   F V N ++  + +
Sbjct: 395 YLIELAKREGKPMLIRIMPEQKYYWVLNVEFHIVDELRRPREIATFQFDVGNAQRFGIKY 454

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
               G  RY   V            +   +       +S          + P+ +  +  
Sbjct: 455 RDENGEIRY--PVIIHTAIIGSVERYIYALLDTAAITESKGEIPRLPTWVSPIQVRVIPI 512

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
             + L+        L    IR ++     +    +++ A+    P  ++ G  E   G L
Sbjct: 513 SKEHLTFANEIVSRLEDRMIRVDIDDRFDETLAKRVRDAETFWVPYIVVIGDREVKTGKL 572

Query: 446 QIKDLAKGKELSREIKNNESWREARVA 472
            ++     K +   I    S  E  + 
Sbjct: 573 SVRVRGVQKPIEMGIDEFTSKIEEEIK 599


>gi|255280775|ref|ZP_05345330.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255268712|gb|EET61917.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 642

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + ++N +LD  R I+   G+  I TP++  +  L +     D   + +++ 
Sbjct: 260 GFPFFLPNGMIVKNALLDYWREIHRKAGYVEISTPIM-LNRQLWETSGHWDHYRENMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 319 VI-DDTDFAIKPMNCPG 334



 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 36/103 (34%), Gaps = 1/103 (0%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +      L         L   GIR+ +    ++  G +++ A     P  ++ G  
Sbjct: 538 QVRVLPISDKYLDYADKVNAALNENGIRSSVD-TRAEKIGYKIREARLAKVPYMLVVGAK 596

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           E   G + ++    G E  + + +  +  +  +    +   E+
Sbjct: 597 EEEDGKVSVRSRFLGDEGQKNLDDFIAAIKEEIRTREMRKVEV 639


>gi|332878705|ref|ZP_08446422.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683342|gb|EGJ56222.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 647

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 36/111 (32%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +              +       +  Q   
Sbjct: 508 NEMHRPVMIHRAPFGSMERFVAILLEHTAGNFPLWLNPNQA--IVLSLSEKYENYAQKVL 565

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           ++L  + IR  +    ++  G +++ A+ +  P  +I G  E   G + ++
Sbjct: 566 RLLENSDIRTLID-NRAETMGKKIREAETQKVPYMLIVGENEEKEGTVSVR 615



 Score = 43.3 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   +R R+   +R   +  G++ + TP + + +         D+  K  F
Sbjct: 261 GLPLWLPKGAALRERLEAFLRKAQKEAGYEQVVTPHIGHKNLYVTS-GHWDKYGKDSF 317


>gi|330935757|ref|XP_003305117.1| hypothetical protein PTT_17864 [Pyrenophora teres f. teres 0-1]
 gi|311318063|gb|EFQ86830.1| hypothetical protein PTT_17864 [Pyrenophora teres f. teres 0-1]
          Length = 528

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/484 (10%), Positives = 117/484 (24%), Gaps = 81/484 (16%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  ++   +R  Y  +GF  + TP++ Y  SL +     +   + +FS+
Sbjct: 77  GSPLILPNGAYVFQKLQSFLRAQYPQFGFQEVITPII-YKKSLWEKSGHWENYAEDMFSV 135

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q             TA +                          E    G          
Sbjct: 136 QGRG---------TTAQI--------------------PEAEGGEDGEFGLKPMNCPGHC 166

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                  ++       +   +                 R+                    
Sbjct: 167 LLFRDEIKSYRDLPVRLADFSALHRNEISGALTGLTRVRRFHQDDAHIFCRPDQILAEIE 226

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
             +         FGL   KLLL     D+     +  +   EQ+   ++ +  +   +  
Sbjct: 227 QTLKFVAMVYRTFGLGPYKLLLSTRPKDSFIGTVEEWDRAEEQLTTALNNIGSEWAINEG 286

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +            K  N     +  ++       R  +                      
Sbjct: 287 DGAFYGPKIDIILKDSNGKEHQTATIQLDFQLPQRFDLQYQASP---------------- 330

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                 ++             D  + R    +    G       + + ++          
Sbjct: 331 ------EELEAGSQTSMDAGLDQTLRRPVIVHRAIYGS--IERFMALLIEHYAGKYPFWL 382

Query: 374 EMGPVLITTMDHDSDSLSK---YQMYTQMLRTAG-------------------IRAEMFL 411
              P  I +++ +++ L      Q     L+ A                    +  ++  
Sbjct: 383 SPRPATILSLNDNAEVLEHVSRVQSVLSGLKAADPPEQVSTSLPKPLPLSTIQLPVDVD- 441

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            SS+    ++  A  +     I+ G  E   G +   ++    + S E       +EAR 
Sbjct: 442 TSSRPLAKKIAEARTKKYNHIIVVGLNEVQTGSV---NMQVVNQPSPE-ATFLELQEARG 497

Query: 472 AQIT 475
            ++T
Sbjct: 498 KEVT 501


>gi|54023348|ref|YP_117590.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54014856|dbj|BAD56226.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 419

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 54/123 (43%), Gaps = 20/123 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    +  +  +   ++LR A +RAE+      + G +++    R  P  +
Sbjct: 317 WLAPTQVVVLPLAGEQHAAAEDVVRVLRAADVRAELAGHDQGSLGARIRA--GRQVPYQV 374

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E + G L ++ L  G++L+                  +P+S+ ++ V ++++ + 
Sbjct: 375 VVGPKEVAAGTLAVR-LRSGEQLA-----------------PLPVSDFLARVDRVVRAHA 416

Query: 494 EEI 496
            E+
Sbjct: 417 AEL 419



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 1/77 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G          +R+ + + IR      G+  + +P+L   +   +         + ++ 
Sbjct: 39  SGLPYWLPSGGALRHALEEYIRTAEHRAGYRHVHSPVLGKRELY-EISGHWAHYREDMYP 97

Query: 73  LQDDDGQWISLRYDLTA 89
             D  G+ + LR  L  
Sbjct: 98  PMDVGGEQVVLRPSLCP 114


>gi|34763461|ref|ZP_00144407.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|237741623|ref|ZP_04572104.1| threonyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|294785766|ref|ZP_06751054.1| threonine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|27886876|gb|EAA24002.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|229429271|gb|EEO39483.1| threonyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|294487480|gb|EFG34842.1| threonine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 637

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  +  + + +   +     L   GIRAE+    ++  G +++ A+ +   P
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMNKLEELGIRAELD-DRNETIGYKIREANGKYKIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           + +I G  E     + I+      + ++ +    ++    V + TI   
Sbjct: 591 MQLIIGKNEVENKGVNIRRFGSKDQFTKPLDEFYNYV---VDEATIKFD 636



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + IRN ++D  R  +E  G+  +ETP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMIIRNVLIDLWRKEHEKAGYLQLETPIMLNKE-LWEISGHWFNYRENMYT 317


>gi|297243465|ref|ZP_06927397.1| threonyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888510|gb|EFH27250.1| threonyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 660

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R    L    +       + PV +T +    +     Q     L    +R EM     
Sbjct: 529 IERFFAILLEHYAGAFP-AWLAPVQVTGVPVADEFAPHLQKLISDLEENMVRCEMDNSDD 587

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQ 473
           + FG +++ A +   P  +I G  + +   +  +    G +L+   +   + W  + + Q
Sbjct: 588 R-FGKKIRNASKSKVPFTLIAGEEDVNNNAVSFR-FRDGSQLNGVPVSQAKEWILSIIKQ 645

Query: 474 I 474
            
Sbjct: 646 R 646


>gi|242373974|ref|ZP_04819548.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis M23864:W1]
 gi|242348328|gb|EES39930.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis M23864:W1]
          Length = 654

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 48/131 (36%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R E+    ++  G +++
Sbjct: 542 EETKGAFPTWLAPKQVEIIPVNVDI-HYDYARQLQDELKSQGVRVEID-DRNEKMGYKIR 599

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + S E K+   W              LV
Sbjct: 600 EAQMQKIPYQIVVGDKEVENNEVNVRKYGSEDQESLE-KDEFIW-------------NLV 645

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 646 DEIR--LKKHR 654


>gi|299065636|emb|CBJ36808.1| Proline--tRNA ligase [Ralstonia solanacearum CMR15]
          Length = 574

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 53/140 (37%), Gaps = 6/140 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P+++ ++ L +     D+ 
Sbjct: 31  MIKKLGAGLYTYMPVGLRVIRKVEQIVREEMNASGAVEVLMPVVQPAE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + + ++    ++   +AR    ++  +      Y+I   FR+E+    
Sbjct: 90  GDEMMRVKDRHERDLVIQPTSEEVVTDIARTEIRSYKQMP--VNFYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETA 143
              +  +  + +  S    A
Sbjct: 148 GIMRGREFTMKDAYSFDRDA 167



 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 3/87 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  + +D      ++       L  AGI   +     +  G  
Sbjct: 463 DARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAELAAAGIDVILD-DRGERPGAM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQI 447
               +    P  ++ G      G L++
Sbjct: 522 FADWELIGVPFRVVVGERGLKEGKLEL 548


>gi|307169877|gb|EFN62386.1| Threonyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 689

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 22/129 (17%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     +++  +    +         Q L  AG+  E+   SS     +++ A 
Sbjct: 576 GKWPYWLSPRQAMVVPVVSQFDE---YAYEVKQKLWDAGVMVEVDTDSSDTLNKKIRNAQ 632

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                  ++ G  ER+ G + I+                      V    + + EL++ +
Sbjct: 633 LAQFNFILVVGEKERNAGTVNIR------------------TRDNVVHGEMAVEELIAKL 674

Query: 486 KKILQENKE 494
           K I++E ++
Sbjct: 675 K-IMKETRD 682



 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N +++ IR+ Y   GF  + +P + Y+  L +         + +FS  D +
Sbjct: 312 FQPRGAYIYNTLVEFIRSEYRKRGFQEVISPNI-YNSKLWQTSGHWQHYAENMFSF-DVE 369

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 370 KETFALKPMNCPG 382


>gi|187933014|ref|YP_001884453.1| prolyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|226699132|sp|B2TIF5|SYP_CLOBB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187721167|gb|ACD22388.1| proline--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 570

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     ++   ++ D IR      G        +  ++ L +     D  
Sbjct: 31  MIRKMASGIYNYMPLGLKALKKVEDIIREEMNEAGAQEFLASAMIPAE-LWQSSGRWDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F ++D + +   L  
Sbjct: 90  GAEMFRVKDRNERDFCLGP 108


>gi|149234740|ref|XP_001523249.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
            YB-4239]
 gi|146453038|gb|EDK47294.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
            YB-4239]
          Length = 1805

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 63/512 (12%), Positives = 145/512 (28%), Gaps = 95/512 (18%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            +  + N++L  + +I+  +G        +E  +          +P   V+ + D  G  +
Sbjct: 1156 DYLLFNKLLKDLADIFHTHG-------AVENLNINVVLPKTPLQPADQVYEVLDKSGSVV 1208

Query: 82   SLRYDLTAPLARYVAEN----FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +L +DLT P+AR++++N                                 F         
Sbjct: 1209 TLPFDLTIPVARFLSKNDVVIPKFYRHEFVYRSNLTKGLGGMPQKFSAMSFNIVTDTPED 1268

Query: 138  SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                 A+     ++ + L  V        I IN+  ILD ++     +          VL
Sbjct: 1269 IVFNDAEC--LKVVDEVLSLVSYIPTRRIILINHYDILDSVISFAFDNVKLNEGALASVL 1326

Query: 198  RAIDKLD-KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--KSMHE 254
              + +L+     + V+ +L +  +           +    ++ ++   +      ++ H+
Sbjct: 1327 GTLSQLEIDKSAKEVRRILRDQVS-----------VPHTVVEDLLENFNFTCPLHEARHK 1375

Query: 255  LYELVKGTI---AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            L +L+  +      E+ F  +  I  ++ + G  S  +    +      Y  G +++ + 
Sbjct: 1376 LQKLMIDSPHLYKLERAFAYITKILGVLNQFGVQSQVLINPLSNYDNSFYQHGIMFQGLF 1435

Query: 312  GFPVM---------NEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
                                +          Y  L  +           S  +      L
Sbjct: 1436 QADGFKRPNRIITGGRFDCLIQSFVDNSMAHYSDLKFKSTHGVGFTLTTSFLLKWTRSIL 1495

Query: 363  KSL----------------------------------------ESSTNNIKEMGPVLITT 382
                                                        +   N        +  
Sbjct: 1496 SRRSSKSSVLSGGGNIGYNVGNNGSGIGSGGASGGVGNSSSGGGNGNINCAGGSRCDVII 1555

Query: 383  MDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQ---LKYADRRNCPLAIIQGTG 438
               D +++SK        L T     ++   ++     Q   +  A      L ++   G
Sbjct: 1556 ASTDLENISKIGYELAGRLWTRKFSVDILPKAAP----QDELIHQALDAGAQLIVLIRAG 1611

Query: 439  ERSRGM--------LQIKDLAKGKELSREIKN 462
            E  +          L++K+L  GKE + +  +
Sbjct: 1612 EIHKKSKKGSSYKPLRVKNLCTGKETNWDNYD 1643


>gi|330502208|ref|YP_004379077.1| prolyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916494|gb|AEB57325.1| prolyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 571

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R      G   +  P ++ ++ L +      + 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVENVVREEMNAAGALEVLMPAIQPAE-LWQESGRWVQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRIKDRHDREFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTK 138



 Score = 40.6 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 44/133 (33%), Gaps = 24/133 (18%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSK-NFGNQ 420
                  N+      + +  + ++++ + +        L  AG    +     K + G  
Sbjct: 459 DERGIRWNDALAPFHIALVPLRYETEQVREATDKLYAELTAAGFDVLLDDRDKKTSPG-- 516

Query: 421 LKYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           +K+AD      P  ++      + G L+ K      E                    +P+
Sbjct: 517 IKFADMELIGIPHRVVVSDRGLAEGKLEYK---SRAETEA---------------QAVPL 558

Query: 479 SELVSTVKKILQE 491
           +E++S ++  ++ 
Sbjct: 559 AEILSFLQARIKR 571


>gi|312622904|ref|YP_004024517.1| threonyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203371|gb|ADQ46698.1| threonyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 639

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 74/258 (28%), Gaps = 6/258 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
             T +        +   ++I  ++  +         + +  +        G +E   ++E
Sbjct: 380 CFTQDDAHIFMLPSQIKDEIKGVIDLIDYFYSVFGFKYHVELSTRPENSMGTDEQWNMAE 439

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
              K       I        G  Y     +          +     +        R+D  
Sbjct: 440 TALKEALEEVGIDYKINEGDGAFYGPKIDFHLEDSLKRTWQ--CATIQLDFQMPERFDLY 497

Query: 338 VSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                G             G     +A+ +   +      + P  I  +    +      
Sbjct: 498 YIGEDGAKHRPVMLHRVVFGSIERFIAILTEHFAGAFPVWLAPTQIRIIPVSDNFNDYAA 557

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             +Q+L+  G R E     S+  G +++ A  +  P  +I G  E+    + ++D  KG 
Sbjct: 558 KISQILKENGFRVEEDF-RSETVGYKIRDAQLQKIPYMVIVGEKEQRDNTIAVRDRKKGD 616

Query: 455 ELSREIKNNESWREARVA 472
             S  I    S  + +V 
Sbjct: 617 LGSFTIDEFVSMVKDKVE 634



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  ++  G+  I+TP++   D   +     D     ++  
Sbjct: 264 GFPFFLPKGMIIRNILEDFWREEHKKRGYQEIKTPIMLTKDLWVQS-GHWDHYKGNMY-F 321

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q  +++      
Sbjct: 322 TKIDDQEFAIKPMNCPG 338


>gi|126667900|ref|ZP_01738865.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627560|gb|EAZ98192.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 641

 Score = 59.1 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 65/209 (31%), Gaps = 10/209 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I  ++   +R+I   +G+  I+TP +  S SL +     D+ 
Sbjct: 255 MQEEAP-GMVFWHPDGWTIYQKMEQYMRDILHRHGYQEIKTPQI-VSRSLWEKSGHWDKF 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            +G+F+  + +    +++             +        ++Y+  P+   E     R  
Sbjct: 313 KEGMFT-TESEKHDFAIKPMNCP-------CHIQVFNQGLKSYKDLPLRLAEFGSCHRNE 364

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                            DA +    +D    V    +  H    +    + + +      
Sbjct: 365 ASGALHGLMRVRGFTQDDAHIFCEESDIQNEVSKFIDLLHEVYKDFGFTEILYKLSTRPE 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
               ++ +              +GVK  L
Sbjct: 425 KRVGSDEVWDKSEAALEQALNREGVKWEL 453



 Score = 43.7 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 37/373 (9%), Positives = 100/373 (26%), Gaps = 12/373 (3%)

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           + I                + +     + S +    +       + +     +++D+ I 
Sbjct: 270 WTIYQKMEQYMRDILHRHGYQEIKTPQIVSRSLWEKSGHWDKFKEGMFTTESEKHDFAIK 329

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             N      +  +      D                   L G+ + +     D++  F +
Sbjct: 330 PMNCPCHIQVFNQGLKSYKDLPLRLAEFGSCHRNEASGALHGL-MRVRGFTQDDAHIFCE 388

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
            +++ +E    +     +  +    E+   +        G +E+   SE   +   N   
Sbjct: 389 ESDIQNEVSKFIDLLHEVYKDFGFTEILYKLSTRPEKRVGSDEVWDKSEAALEQALNREG 448

Query: 289 IKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +K       G  Y     +   + I         Q         G         R     
Sbjct: 449 VKWELLPGEGAFYGPKIEFSLKDCIGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVM 508

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +           + + ++  E +  +      V I  +    +     +   +   + G 
Sbjct: 509 LHRAVLGSFERFIGILIEEYEGAFPSWLAPTQVAILNI--TDNQREYCENLAKKWDSLGF 566

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           R    L  ++  G +++       P  ++ G  E     + ++   KG+    ++     
Sbjct: 567 RVNADL-RNEKIGFKIREHTINKVPFLVVVGDKEVENNTVAVRT-RKGE----DLGTLSL 620

Query: 466 WREARVAQITIPI 478
               ++ Q  +  
Sbjct: 621 EAFEQLLQEDVGR 633


>gi|327398599|ref|YP_004339468.1| Prolyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181228|gb|AEA33409.1| Prolyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 578

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 81/284 (28%), Gaps = 21/284 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              +L  G  +     +R+  ++ D +R      G   I    ++ ++ L K     +  
Sbjct: 31  FILKLASGIYNYLPLGLRVIRKVSDIVREEMNKAGAQEILMAAIQPAE-LWKESGRWNDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRI------GPVFRN 117
            K +  ++D   +         ++   + R   +++  +       +        P F  
Sbjct: 90  GKELLRIKDRGDRDFVFGPTHEEVVTDIVRRFVKSYKQMPLNLYQIQTKFRDELRPRFGL 149

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
            +      +     D D  G         +          +  +  +   G    K  + 
Sbjct: 150 MRGREFIMKDAYSFDKDEAGMDVSYEKMNIAYHNIFRRCGLAFRSVEADTGSIGGKDSEE 209

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            +       D+        +   D  +          + E       +  + A    + I
Sbjct: 210 FMVLSQTGEDE--------IVICDSCEYASNVERATSIVEDEPAQEIELKEVATPGKQTI 261

Query: 238 DIMVSFLSIDLE---KSMHELYELVKGTIAGEKGFNELVVISEL 278
             +  FL  D +   K++    E  +      +G +EL +I  +
Sbjct: 262 KDVCEFLGSDPKFSAKALVYKNEKDEVFCFFVEGDDELNLIKAM 305


>gi|171463016|ref|YP_001797129.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|226701317|sp|B1XT38|SYP_POLNS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171192554|gb|ACB43515.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 580

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/153 (9%), Positives = 47/153 (30%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +++  ++ + IR      G   +  P+++ ++ L +     ++    +  +
Sbjct: 38  GVYNYLPLGLKVIRKVENIIREEMNRAGAIELLMPMIQPAE-LWQETGRWEKMGPELLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
           +D   +   ++    ++   LAR   +++  +       +                  F 
Sbjct: 97  KDRHDRDFLIQPTSEEVVTDLARNEIKSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFS 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D      + +   M        + +G
Sbjct: 157 MKDAYSFDRDTEGLKKSYQIMFDAYTRIFKRMG 189


>gi|157691545|ref|YP_001486007.1| threonyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157680303|gb|ABV61447.1| threonine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 643

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 1/105 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L       Q LR  GIR  +     +  G +++ A  +  P   
Sbjct: 539 WLAPVQVQIIPVSKIHLDHCLEVQQQLRKIGIRVTID-ERDEKLGYKMREAQMQKIPYIA 597

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           + G  E     L I+   +       I + +     ++   T+  
Sbjct: 598 VIGDTEMQEKTLNIRQHGEKTSNQLSIDDFQHMAAQQIKDRTVAQ 642



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN ++   R +     ++ + TP +   +   K     D  ++ ++  
Sbjct: 266 GMPFYLPKSQIVRNELMAFSREVRSKAQYEEVSTPFMMNQELWEKS-GHWDHYHENMY-F 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +L+             +         +YR  P+   E     R       + 
Sbjct: 324 SEVDHTSFALKPMNCPG-------HMLMFKNSLFSYRDLPIRMAEFGQVHRHEFSGALNG 376

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 377 LFRVRTFCQDDAHIF 391


>gi|302391179|ref|YP_003826999.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Acetohalobium
           arabaticum DSM 5501]
 gi|302203256|gb|ADL11934.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Acetohalobium
           arabaticum DSM 5501]
          Length = 639

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 4/94 (4%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +    D L       + L  AG+R E+     K  G +++ A  +  P  +I G  E  
Sbjct: 547 VIPVTDDHLDYAYQVKEELADAGVRVEVDARQEK-VGYKIREAQVQQVPYMLIVGDDEIE 605

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
              + ++D  +G       K+   ++   V +I 
Sbjct: 606 DKTVSVRDRREGD---LGAKDLAEFKAEIVKEIE 636



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF     K + +RN ++D  +  +   G+  I+TP++   D L K     D   + ++ 
Sbjct: 265 KGFPFFHPKGMVVRNELIDFWKEEHRQAGYKEIKTPVILNQD-LWKQSGHWDHYKEDMY- 322

Query: 73  LQDDDGQWISLRYDLTAP 90
             + D +  +++      
Sbjct: 323 FTEIDKEPHAVKPMNCPG 340


>gi|298252757|ref|ZP_06976551.1| threonyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297533121|gb|EFH72005.1| threonyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 660

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R    L    +       + PV +T +    +     Q     L    +R EM     
Sbjct: 529 IERFFAILLEHYAGAFP-AWLAPVQVTGVPVADEFAPHLQKLISDLEENMVRCEMDNSDD 587

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQ 473
           + FG +++ A +   P  +I G  + +   +  +    G +L+   +   + W  + + Q
Sbjct: 588 R-FGKKIRNASKSKVPFTLIAGEEDVNNNAVSFR-FRDGSQLNGVPVSQAKEWILSIIKQ 645

Query: 474 I 474
            
Sbjct: 646 R 646


>gi|289523259|ref|ZP_06440113.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503802|gb|EFD24966.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 402

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 67/410 (16%), Positives = 137/410 (33%), Gaps = 55/410 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++   PRG  +           +       +  YG+ P     L+  +++   +      
Sbjct: 1   MKL-TPRGCKNVGGDVALNVEELRRDFMEAFVPYGYRPFWPSGLQLLEAITDKISPNLH- 58

Query: 67  NKGVFS--LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           N+ + +       G+  ++R D+T  +  Y A +F+    P R      ++R  K  P +
Sbjct: 59  NRFMVTNSFF---GEPCAVRTDVTLGVVDYCASHFEPHERPLRLCYTERIYRRPKS-PDK 114

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             + +Q   + +G   E AD E+  ++   L  +   +                      
Sbjct: 115 NVERLQMGAELIGWEGEGADVELISLLLSYLNGLNCPKIALT------------------ 156

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
                L +  ++ RAI  L     + +   L  GR D   +  K    +           
Sbjct: 157 -----LGDVSLIQRAIKSLPSPHGKALLDCLERGRLDEYAEAAKNLPPSPLST-FFEELP 210

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
            +     +      + G    E+    L  I   + K G+  + I +  ++VR L+YY+G
Sbjct: 211 WLKGNAEVLYRASELLG--EMEEAIRPLKFIYSELAKLGH-EDSIVVDLSLVRELDYYSG 267

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
            +++       ++          VGGGGRYD L+              +    +  AL  
Sbjct: 268 PIFDVYFEETGVS----------VGGGGRYDRLLEA----------CGMLGQAVGFALDL 307

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              + +  ++ G      +    ++ S      + L + G R E+     
Sbjct: 308 ERLALSVNRKRGEAQRILLWAQKNAPSYVLKCAEELISLGYRVEILWREK 357


>gi|241894947|ref|ZP_04782243.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Weissella
           paramesenteroides ATCC 33313]
 gi|241871665|gb|EER75416.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Weissella
           paramesenteroides ATCC 33313]
          Length = 699

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 82/276 (29%), Gaps = 7/276 (2%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK--GTIAGEKGFNELVV 274
           E   ++   F     +  E   I+   + +  +  + +    +        EK F++  +
Sbjct: 423 EMTLNDGHTFVMLDQIEDEFKKILQLMVDVYKDFDITDYRFRLSYRDPKNTEKYFDDDEM 482

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
             +  R      + + +      G   + G   +  +   +  E+    +        R+
Sbjct: 483 WEKAQRMLKGAMDDMDLEYFEAEGEAAFYGPKLDVQIKTALGGEETLSTIQLDFLLPERF 542

Query: 335 DGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           D       G+         G    + R    L  +             +     +     
Sbjct: 543 DVTYVGSDGELHRPVMIHRGIISTMERFTAYLTEMYKGAFPTWLAPHQVRIIPVNREAHG 602

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              Q  T  L    IRA+ + G ++  G  ++ A     P  ++ G  E S   + I+  
Sbjct: 603 EFAQALTDRLVKQDIRAD-YDGRNEKLGYLIRNAQSLKIPYTLVIGDEEVSNDTVTIRRF 661

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                  + +   E+   A +A  +  +  L   VK
Sbjct: 662 GSRDTSVKSVDQFETDLLADIANHSRALDTLEKAVK 697



 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 55/187 (29%), Gaps = 9/187 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G A        IR  +   I +     G+  + TP+L   +   K     D     +F 
Sbjct: 304 SGLAVWMPNGAAIRRTLERYIVDREVQDGYQHVYTPVLSNLNLY-KQSGHWDHYRDDMFP 362

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG------PGR 124
             D   G+++ LR             +  +    P R   +G + R EK G        R
Sbjct: 363 PMDMGDGEFLELRPMNCPSHIMVYKHHQRSYRDLPFRVAELGMMHRYEKSGALTGLSRVR 422

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
                      +    E    ++  +M D  +   I    + +   + K  +   +   +
Sbjct: 423 EMTLNDGHTFVMLDQIEDEFKKILQLMVDVYKDFDITDYRFRLSYRDPKNTEKYFDDDEM 482

Query: 185 HGDDKLN 191
               +  
Sbjct: 483 WEKAQRM 489


>gi|126313772|ref|XP_001370758.1| PREDICTED: similar to Threonyl-tRNA synthetase-like 1 [Monodelphis
           domestica]
          Length = 717

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 55/469 (11%), Positives = 118/469 (25%), Gaps = 80/469 (17%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR+ Y   GF  + TP L +S  L +        +  +F      
Sbjct: 323 FLPRGTRVYNALMTFIRDEYARRGFSEVRTPTL-FSTKLWEQSGHWKHYSGDMF------ 375

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                LR                    P                     + + C    + 
Sbjct: 376 ----VLRP-----------------PDPDGPADCQNNCSTNHPQSMLALKPMNCPAHCLI 414

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL----DGILEKIGLHGDDKLNER 193
            +          +      A+        +G   R       D  +       + ++   
Sbjct: 415 FAHRPRSWRELPLRLADFGALHRTEASGGLGGLTRLRRFQQDDAHIFCAQDQLESEIRGC 474

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  LR++  +  F    V           S  +        +Q + ++       ++++ 
Sbjct: 475 LDFLRSVYTVFGFSFHLVLSTRPSSFLGESFLW--------DQAEQIL-------QQALD 519

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILG 312
           E  E                               + I   + R  +  T    ++  L 
Sbjct: 520 EFGEPWDLNPGD--------------GAFYGPKIDVHIQDALGRPHQCGTIQLDFQLPLR 565

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    Q  V+   V                 +           L V  ++        
Sbjct: 566 FGLQYMGQAGVLERPVL----------------IHRAVLGSVERMLGVLTENYGGKWPLW 609

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 ++  +  + +     +   + L+ AG+  ++    S     +++ A        
Sbjct: 610 LSPLQAMVIPVGAEQE--GYAREVQEALQAAGLAGDLDKDPSLTLSRRVRRAQLSQYNFQ 667

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
            + G  E+SRG + I+    G+   R +                   EL
Sbjct: 668 FVVGPREQSRGTVNIRTRDSGQLGERPVAEAVVRLRELRDARVPNAEEL 716


>gi|297538938|ref|YP_003674707.1| threonyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258285|gb|ADI30130.1| threonyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 635

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/167 (8%), Positives = 48/167 (28%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G      +   I   +   +R ++ +Y +  + TP +    +L +        
Sbjct: 255 MQDDAP-GMVFWHPRGWSIWQEVEQYMRKMFRDYNYQEVRTPTIMDR-TLWEKSGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            +G+F    +  +  +++        +    +  +                 +       
Sbjct: 313 REGMFVTSSES-RDYAVKPMNCPGHVQIFNSSLHSYRDLPLRLAEFGSCHRNEPSGSLHG 371

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +AD ++ +     D+       K
Sbjct: 372 LMRVRGFTQDDAHIFCTEEQVEAEVADFIKMLYKAYGDFGFNDVLVK 418



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/414 (10%), Positives = 102/414 (24%), Gaps = 50/414 (12%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +          +        ++      + F   +   V +                   
Sbjct: 254 HMQDDAPGMVFWHPRGWSIWQEVEQYMRKMFRDYNYQEVRTPTIMDRTLWEKSGHWQNYR 313

Query: 158 VGIKRNDYHIGINNRKILDG-----ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
            G+            K ++      I         D                   L G+ 
Sbjct: 314 EGMFVTSSESRDYAVKPMNCPGHVQIFNSSLHSYRDLPLRLAEFGSCHRNEPSGSLHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     + +E  D +        +   +++   +        G +  
Sbjct: 373 MRVRGFTQDDAHIFCTEEQVEAEVADFIKMLYKAYGDFGFNDVLVKLSTRPEKRIGTDAD 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-- 330
              +E    +    N +        G  Y     +        +    +           
Sbjct: 433 WDKAETSLANALKLNNLDFEYQPGEGAFYGPKIEF---TLKDSLGRLWQCGTIQLDPNLP 489

Query: 331 ---GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
              G  Y    +  K   +        + R I  L    +    +  + PV +  ++   
Sbjct: 490 ERLGAEYVAEDNSRKHPVMLHRAIVGSMERFIGILIENYAGAMPLW-LAPVQVMVLNISE 548

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGE 439
           +     +   +ML+  GIR E  L + K        +             P  ++ G  E
Sbjct: 549 NQADYVRQVVEMLKKNGIRCEFDLRNEKITYKIREHSMQK---------MPYLLVAGERE 599

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
              G + ++        +R+ ++  S          +PI  L+  +K  ++   
Sbjct: 600 MQTGHVAVR--------TRKGEDLGS----------MPIEALIERLKAEIETKA 635


>gi|283783304|ref|YP_003374058.1| threonine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441631|gb|ADB14097.1| threonine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 676

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R    L    +       + PV +T +    +     Q     L    +R EM     
Sbjct: 545 IERFFAILLEHYAGAFP-AWLAPVQVTGVPVADEFAPHLQKLISDLEENMVRCEMDNSDD 603

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQ 473
           + FG +++ A +   P  +I G  + +   +  +    G +L+   +   + W  + + Q
Sbjct: 604 R-FGKKIRNASKSKVPFTLIAGEEDVNNNAVSFR-FRDGSQLNGVPVSQAKEWILSIIKQ 661

Query: 474 I 474
            
Sbjct: 662 R 662


>gi|254488857|ref|ZP_05102062.1| prolyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214045726|gb|EEB86364.1| prolyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 446

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/461 (9%), Positives = 121/461 (26%), Gaps = 63/461 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I + +    +  G  P+  P L+ +D L K     D  
Sbjct: 31  MIKQSAAGIYSWLPLGFKVLRKIENIVHEEQQRAGHIPMLMPTLQSAD-LWKESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GPEMLRIKDRQDRDMLYGPTNEEMITDIFRSHVGSYKDLP--LTLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFLM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A     +       
Sbjct: 180 SYLRSYERMGLQAI------------PMRADSGPIGGDDTHEFLVLAETGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D + +  +  +      + ++    L   +    ++    +    S           
Sbjct: 221 VFYDSQITELKFGDREIDYDSVDQCQAVLEEFTSRYARTDETHDAALFSEVPQDRQRTAR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F     +               DG  +     +       +  + +  +  
Sbjct: 281 GIEVGQIFYFGTKYSEPMGATVQGP------DGKPTPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFGNQL 421
                         V I  +   D ++ S  Q     +   G+  E ++   ++  G + 
Sbjct: 335 DKGIIWPEGVTPFHVGIVNLKQGDEEADSACQALYDSITALGL--EPLYDDRNERAGGKF 392

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              D    P  I  G      G++++     G+      ++
Sbjct: 393 ATMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEEMAPED 433


>gi|311694949|gb|ADP97822.1| prolyl-tRNA synthetase [marine bacterium HP15]
          Length = 577

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R   ++   +R   +  G   +  P ++ ++ L +      + 
Sbjct: 31  MIRKLAAGLYTWLPMGLRTLRKVERIVREEMDKSGAQEVLMPAVQPAE-LWEESGRWTQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  ++D  G+      
Sbjct: 90  GGELLRMKDRHGRDFCFGP 108



 Score = 37.1 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 27/102 (26%), Gaps = 3/102 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSD--SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I T++           +   + LR AG    +     +  G +
Sbjct: 463 DENGIIWPDAIAPFQVAIVTLNAHKSPTVAEAGEKLYEQLRQAGYDVLLDDRKER-PGVK 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
               +    P   +      + G L+ K     ++    +  
Sbjct: 522 FADMELIGIPHRFVVSERGLAAGTLEYKGRKDAEKQDVPVAE 563


>gi|300790769|ref|YP_003771060.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299800283|gb|ADJ50658.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 390

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G          +R+ + + +RN+    G+  + +P+L   +   +           ++  
Sbjct: 23 GLPYWLPDGAIVRHSLEEYVRNLERRAGYQHVHSPVLGKRELY-EISGHWSHYRDEMYPP 81

Query: 74 QDDDGQWISLRYDLTA 89
           D  G+ + LR  L  
Sbjct: 82 MDVGGEQLVLRPSLCP 97


>gi|302206413|gb|ADL10755.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           C231]
 gi|302330969|gb|ADL21163.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           1002]
 gi|308276656|gb|ADO26555.1| Putative prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           I19]
          Length = 585

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 9/144 (6%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           E       G          ++     + +P  G        ++A+ + +           
Sbjct: 426 EVGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGIGVSRLMAVLAEQRHDEKGLNWPI 485

Query: 378 ------VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D+ ++         L  AG+          + G + K A+    P 
Sbjct: 486 EVAPFAVHVVVANKDTAAIEAGDALVSELDAAGVEVLFDDRPKVSPGVKFKDAELLGMPY 545

Query: 432 AIIQGTGERSRGMLQIKDLAKGKE 455
            ++ G      G ++++   +G+E
Sbjct: 546 VVVLGRS-FKEGKVELR--VRGEE 566



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 45/156 (28%), Gaps = 14/156 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R   +I + +R   +  G   +  P L   E   +  ++    D     +
Sbjct: 40  GVYTWLPLGLRTLKKIENIVREEMDGIGAQELLFPALLPREPYQATNRWTEYGD----SL 95

Query: 71  FSLQDDDGQWISLRY---DLTAPLAR-YVAENFD---TIVFPCRTYRIGPVFRNEKHGPG 123
           F L+D  G    L     ++ A   +   +   D   T+      YR     R       
Sbjct: 96  FRLKDRKGADYLLGPTHEEMFAGAVKDMYSSYKDFPVTLYQIQTKYRDEERPRAGILRGR 155

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
            F        D      E++           L+ +G
Sbjct: 156 EFVMKDSYSFDMTDDGLESSYQRHRGAYQRILDRLG 191


>gi|297569216|ref|YP_003690560.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925131|gb|ADH85941.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 646

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 4/106 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV     +     L   +     LR AG+R E  L  ++    +++ A  +  P  +
Sbjct: 539 WLAPVQARICNITDAQLDYGEEVYAALRRAGVRVEKDL-RNEKLNYKIREAQLQKIPYML 597

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           I G  E + G + ++   +    +        +     A++T+   
Sbjct: 598 IVGDKEAAEGTVTVR---QRDGKNLPPMPVSEFAALVAAEVTVNQE 640



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   +R  I D  R+ +  +G++ + TP +   + L +     D   + ++S  + +
Sbjct: 268 WQPKGALLRRLIEDYWRDEHYRHGYELLSTPHIARRE-LWQTSGHLDFYGENMYSPMEVE 326

Query: 78  GQWISLRYDLTA 89
                L+     
Sbjct: 327 EVQYQLKPMNCP 338


>gi|221320079|ref|ZP_03601373.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
          Length = 643

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/456 (11%), Positives = 113/456 (24%), Gaps = 83/456 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G++ + TP+L   +         D   +G+F  
Sbjct: 265 GLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTPVLGSKELYETS-GHWDHYQEGMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNETLVLRPMNCP-------HHMMIYKQDIHSYRELPIRIAELGTMHRYEMSGALS- 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                   T +     +  D ++   I+       +     L     ++     +   + 
Sbjct: 376 GLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYEDFGLSDYTFRLSYRDPEDTEKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +K      + +  +  +           G  L  +    +    ++   +   
Sbjct: 436 FDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDF 495

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
            L E    T  GE G                          ++      T   + A L  
Sbjct: 496 LLPERFDLTYIGEDGKQH--------------------RPVVIHRGVVSTMERFVAFLIE 535

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                             G     ++  + Q +P +                        
Sbjct: 536 E---------------HKGALPTWLAPVQFQVIPVSPAVHLDYA---------KKVQERL 571

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           +   + +     D             +R A                Q++       P  +
Sbjct: 572 QCEGLRVEVDSRDE-------KIGYKIREA----------------QMQK-----IPYML 603

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           + G  E   G + ++    G++ S  I  +E  ++A
Sbjct: 604 VVGDQEAENGAVNVR--KYGEQNSETISLDEFVKKA 637


>gi|290985788|ref|XP_002675607.1| Glycyl-tRNA synthetase [Naegleria gruberi]
 gi|284089204|gb|EFC42863.1| Glycyl-tRNA synthetase [Naegleria gruberi]
          Length = 650

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 12/115 (10%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + P  +  +   +D     +   Q L   GI   +  G ++N G +   AD    P 
Sbjct: 522 PPAIAPYKVALLPIKADQDQIVKKLQQSLARYGISHRVDAG-NQNIGKKYARADDIGIPF 580

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           AI       + G + I++    +++   I +           IT+ +++L+  +K
Sbjct: 581 AITIDDNSVTAGTVTIRERDSCEQVIVPISDL----------ITV-LNDLIDRIK 624


>gi|121594741|ref|YP_986637.1| threonyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|166223314|sp|A1W8I6|SYT_ACISJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120606821|gb|ABM42561.1| Ser-tRNA(Thr) hydrolase [Acidovorax sp. JS42]
          Length = 639

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/258 (10%), Positives = 67/258 (25%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  ++ P +    +L +     D+    +F+ 
Sbjct: 261 GTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQI-LDKTLWEKTGHWDKYRDNMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKRDYALKPMNCPG-------HILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +       L               +    + I +          ++ 
Sbjct: 372 IMRVRGFTQDDGHIFCTEDHILAECTAYTALLQKVYKDFGFHNIIYKVATRPEARIGSDE 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                + DK +   ++ ++    E           G  +     D +         +   
Sbjct: 432 -----SWDKAEHALMESLRASGCEFEIAPGDGAFYGPKIEYTLKDAIGRQWQCGTMQVDF 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 487 SMPERLDAEYVGEDGGRH 504


>gi|152975545|ref|YP_001375062.1| threonyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152024297|gb|ABS22067.1| threonyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 640

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 66/258 (25%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TPL+   +   K     D     ++  
Sbjct: 265 GMPFYLPKGQIIRNELEGFLREIQQAYDYQEVRTPLMMNQELWEKS-GHWDHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +        R+YR  P+   E     R       + 
Sbjct: 323 SEVDHKSFALKPMNCPG-------HMLIFKHKLRSYRDLPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +        +                      +  +    +    
Sbjct: 376 LLRVRTFCQDDAHIYVTAEQIESEIQSVLKQIDYVYRTFGF------EYEIELSTRPENS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      ++ +      +K L    R +       G  +     D +         +   
Sbjct: 430 MGDDELWNQAEAALENVLKSLQYNYRINEGDGAFYGPKIDFHIKDALKRSHQCGTVQLDF 489

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E        EK    
Sbjct: 490 QMPEKFDLHYIDEKNEKR 507



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 90/345 (26%), Gaps = 12/345 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           + +      +       D +    +    + +   N      I +       D       
Sbjct: 301 MMNQELWEKSGHWDHYKDNMYFSEVDHKSFALKPMNCPGHMLIFKHKLRSYRDLPIRMCE 360

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
             +         L G+  +    + D        A     +I  ++  +         E 
Sbjct: 361 FGQVHRHEFSGALNGLLRVRTFCQDDAH--IYVTAEQIESEIQSVLKQIDYVYRTFGFEY 418

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +EL   +E   ++   S +         G  Y     +        
Sbjct: 419 EIELSTRPENSMGDDELWNQAEAALENVLKSLQYNYRINEGDGAFYGPKIDFHIKDALKR 478

Query: 316 MNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
            ++                   D    + +   +           L + ++    +    
Sbjct: 479 SHQCGTVQLDFQMPEKFDLHYIDEKNEKRRPVVIHRAVLGSFDRFLAILIEHFGGAFPAW 538

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V +  +  +    S  +      +   IR E  +  ++  G +++ A  +  P  
Sbjct: 539 LAPIQVKVIPVS-NLVHDSYTKEIEDKFKQVDIRVERDI-RNEKLGYKIRDAQIQKIPYV 596

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           ++ G  E     + ++    G+E S E+ +   + E    QI I 
Sbjct: 597 LVIGDKEMENASVNVR--KYGEENS-EVVSLHEFIENL--QIEIK 636


>gi|296332117|ref|ZP_06874581.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675488|ref|YP_003867160.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150888|gb|EFG91773.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413732|gb|ADM38851.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 643

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 71/228 (31%), Gaps = 9/228 (3%)

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++  +  D   S +      +     EK F++  + ++         + I        G
Sbjct: 406 RLIQDVYEDFGLSDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKEAMDEIGHDYYEAEG 465

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-----SI 353
              + G   +  +   +  E+    V        R+D       G+            S 
Sbjct: 466 EAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGKQHRPVVIHRGVVST 525

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               +   ++  + +           +  +   S  L   +   + L+  G+R E+    
Sbjct: 526 MERFVAFLIEEHKGALPTWLAPVQFQVIPVSP-SVHLDYAKKVQERLQREGLRVEVD-SR 583

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +  G +++ A  +  P  ++ G  E   G + ++    G++ S  I 
Sbjct: 584 DEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVR--KYGEQNSETIS 629



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G++ + TP+L   +         D   +G+F  
Sbjct: 265 GLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTPVLGSKELYETS-GHWDHYQEGMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D + + LR             +         +YR  P+   E     R+  
Sbjct: 324 MEMDNETLVLRPMNCP-------HHMMIYKQDIHSYRELPIRIAELGTMHRYEM 370


>gi|295101322|emb|CBK98867.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium
           prausnitzii L2-6]
          Length = 594

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/342 (10%), Positives = 94/342 (27%), Gaps = 10/342 (2%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M     +       +   I  N       +  +IG    D   
Sbjct: 258 TSGHWDHYRENMFPAMEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIAHDFRY 317

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L+ I++   F      L     +  +           + +   +  +  +   + 
Sbjct: 318 ESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVADVCNLIFETYKDFNITDYRCVLSLRD 377

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +  +            N L  +   +    + +  I  ++     L+        A  
Sbjct: 378 PADKKKYHDDDAMWNHAENALREVLTEL--GIHFTEEIGEAAFYGPKLDVNVKPAVGAEY 435

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                                  D   +      +           +   ++  +     
Sbjct: 436 TLSTCQLDFCLPA---KFHLTYVDKDGTEKTPVVLHRAILGSLDRFMAYLIEETKGKFPT 492

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN-CP 430
              + PV +  +     +L   +  T+ L  AG+R  +    ++  G +++ A + +  P
Sbjct: 493 W--LAPVQVKVLPVSEKTLEYSEAITEKLVEAGVRVALD-DDNQKIGYKIRAAQQVDRVP 549

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             ++ G  E   G + ++D  KG+  + E+    +   + + 
Sbjct: 550 YMLVLGAKEAEAGNVSVRD-RKGETTTMEVDEFIAKVTSEIK 590



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 38/137 (27%), Gaps = 8/137 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG          +   + + I+      G+  + TP +   +   K     D   + +F 
Sbjct: 213 RGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLY-KTSGHWDHYRENMFP 271

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR             +         +YR  P+   E     R+       
Sbjct: 272 AMEMEGESYVLRPMNCP-------HHMMIYANRPHSYRDLPMRIGEIAHDFRYESSGTLK 324

Query: 133 VDNVGSSAETADAEMCM 149
               G      DA +  
Sbjct: 325 GIERGRHFCQNDAHLFC 341


>gi|299534746|ref|ZP_07048076.1| prolyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|298729834|gb|EFI70379.1| prolyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
          Length = 568

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 60/553 (10%), Positives = 136/553 (24%), Gaps = 94/553 (16%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+  +I   IR   E      +  P L+ ++ L +     ++    +  
Sbjct: 37  SGVYSYLPLAKRVLTKIETIIREEMEAINSIELLMPSLQSAE-LWQESGRWEKYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRF 125
           L+D   +  +L     ++   L R   +++  +          +R     R        F
Sbjct: 96  LKDRHDRDFALGPTHEEVITTLVRDEIKSYKKLPLTLYQIQTKFRDEKRPRFGLLRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG--------INNRKILDG 177
                        S +    +M    ++    +G+                 +   +L  
Sbjct: 156 IMKDAYSFHASRESLDETYEDMYRAYSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSE 215

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I E    + D       I +  +    +   + +K +      +        A L  E  
Sbjct: 216 IGEDTIAYSDTSDYAANIEMAEVIVDYQPSDEALKDVEKVATPEQKTIEDVSAFLKVEPA 275

Query: 238 DIMVSFLSIDLEKSM------HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           +++ S +     + +            +K   A + G  EL   + +    G     I  
Sbjct: 276 NVIKSLVFDVDGELVVVLARGDHEINDIKLKNALDAGSVELASEAAIQELLGCGIGSIGP 335

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKP---VVFGSVGGGGRYDGLVSRFKGQNVP- 347
               V         +     G    NE       V          Y  +    +G   P 
Sbjct: 336 VKLPVDVKVVADHAIKSIRNGIAGANEDGFHLVNVNPERDFAVNDYLDIRFIQEGDPSPD 395

Query: 348 -----------------ATGFSIGISRLIVALKSLES----------------------- 367
                              G +         L                            
Sbjct: 396 GQGNIKFAEGIEVGHIFKLGTTYSAKMNGTFLDEQGKAQPFIMGCYGIGVSRILAAVAEH 455

Query: 368 --------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                       +      ++     D   ++  +    +L++      +     +  G 
Sbjct: 456 FQDDNGFTWPTQLAPYDIHVVPVNTKDEAQVALAEELYGLLKSYRYDVLLDDRPERA-GV 514

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +   AD    P+ +  G    + G++++K    G+           W             
Sbjct: 515 KFADADLIGLPVRVTVGKK-ATEGIVEVKFRQTGE--------TFEW----------KKE 555

Query: 480 ELVSTVKKILQEN 492
           E++  + +  ++N
Sbjct: 556 EVIDRLNEFFRKN 568


>gi|225849423|ref|YP_002729587.1| threonyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644143|gb|ACN99193.1| threonyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 641

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 38/101 (37%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L        +L    +R E+   S +    +++ A+ +  P  +
Sbjct: 541 WLSPVQVKIIPIADKHLDFANKVKDILLQNKVRVEVDDRSER-MNKKIRDAELQKIPFML 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G  E     + +++ A GK  S  + N      + + + 
Sbjct: 600 VIGDKEVENNSVAVREKASGKTESMTVDNFVKKITSLIKEK 640



 Score = 40.6 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
              K   IR  I D+ +  +   G+  + TP +   + L +         + ++
Sbjct: 270 WLPKGAIIRKEIEDAWKEEHLKRGYQLVYTPHV-GKEHLWQTSGHLSFYQENMY 322


>gi|57168347|ref|ZP_00367481.1| threonyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020155|gb|EAL56829.1| threonyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 602

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 507 VGIVPISDSHIAYAKEIQRALLELNIDSEVY-EKNESLSKKIRTAEKQKLPMILVLGDEE 565

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 566 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 600


>gi|311069390|ref|YP_003974313.1| threonyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869907|gb|ADP33382.1| threonyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 643

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/228 (11%), Positives = 71/228 (31%), Gaps = 9/228 (3%)

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++  +  D   + +      +     EK F++  + ++         + I        G
Sbjct: 406 RLIQDVYEDFGLNDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKDAMDEIGSDYYEAEG 465

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-----SI 353
              + G   +  +   +  E+    V        R+D       G+            S 
Sbjct: 466 EAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVST 525

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               +   ++  + +           +  +      L   +   + L+  G+R E+ +  
Sbjct: 526 MERFVAFLIEEHKGALPTWLAPVQFQVIPVSPSV-HLDYAKKVQERLQREGLRVEVDI-R 583

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +  G +++ A  +  P  ++ G  E   G + ++    G++ S  I 
Sbjct: 584 DEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVR--KYGEQKSETIS 629


>gi|300858703|ref|YP_003783686.1| prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686157|gb|ADK29079.1| Prolyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
          Length = 585

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 9/144 (6%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           E       G          ++     + +P  G        ++A+ + +           
Sbjct: 426 EVGHIFQLGRKYTEAFDVQILDENGKRAIPTMGSYGIGVSRLMAVLAEQRHDEKGLNWPI 485

Query: 378 ------VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D+ ++         L  AG+          + G + K A+    P 
Sbjct: 486 EVAPFAVHVVVANKDTAAIEAGDALVSELDAAGVEVLFDDRPKVSPGVKFKDAELLGMPY 545

Query: 432 AIIQGTGERSRGMLQIKDLAKGKE 455
            ++ G      G ++++   +G+E
Sbjct: 546 VVVLGRS-FKEGKVELR--VRGEE 566



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 45/156 (28%), Gaps = 14/156 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R   +I + +R   +  G   +  P L   E   +  ++    D     +
Sbjct: 40  GVYTWLPLGLRTLKKIENIVREEMDGIGAQELLFPALLPREPYQATNRWTEYGD----SL 95

Query: 71  FSLQDDDGQWISLRY---DLTAPLAR-YVAENFD---TIVFPCRTYRIGPVFRNEKHGPG 123
           F L+D  G    L     ++ A   +   +   D   T+      YR     R       
Sbjct: 96  FRLKDRKGADYLLGPTHEEMFAGAVKDMYSSYKDFPVTLYQIQTKYRDEERPRAGILRGR 155

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
            F        D      E++           L+ +G
Sbjct: 156 EFVMKDSYSFDMTDDGLESSYQRHRGAYQRILDRLG 191


>gi|299143351|ref|ZP_07036431.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517836|gb|EFI41575.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 584

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 80/302 (26%), Gaps = 13/302 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++  ++   +R   +  G   I    ++  +   +     DR    +F 
Sbjct: 37  SGIYTYLPLGYKVIKKVEKIVREEMDRAGSQEILMSAIQPKEI-WEASDRWDRFGPEMFK 95

Query: 73  LQDDDGQWISLRY--D--LTAPL---ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           L+D + +   L    +   T  +    +   +    +      YR     R   +    F
Sbjct: 96  LRDRNDREFCLGPTAEEYFTTLIKDEVKSYKQLPLNLYQIQTKYRDEKRPRFGINRAREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                   D    + + +  EM        + +G+   DY I   +   + G      + 
Sbjct: 156 SMKDAYSFDTTPETMQVSYMEMYRAYEKIFDRLGL---DYKIVEGDNGAMGGKKSHEFIA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +     +                V   L E       +     +  S  I+ + SFL 
Sbjct: 213 LSETGEGVIAYSPTGKYAATQEKAKVVYELPERCERLELEEVYTPD--STTIEAVASFLG 270

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +  +  +  +  +V G         +  +    +                 + L   +  
Sbjct: 271 LKSQNCIKAIDLMVSGNPVIVFIPGDRELNMAKLEGYLMTPEHEIEMMNDEQILSINSAP 330

Query: 306 VY 307
            Y
Sbjct: 331 GY 332


>gi|217077729|ref|YP_002335447.1| threonyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037584|gb|ACJ76106.1| threonyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 636

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      +   +   ++L  + IR E+    ++  G +++ A     P  I
Sbjct: 536 WISPVQVLVLPVSDKYIDYAKKVARLLSESNIRVEVD-SRNETLGYKIREAQISKVPYMI 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           I G  E   G + ++     +E    ++         V + 
Sbjct: 595 IVGENEEKSGKISVRSRDGVEEKDVSVEEFVEVVRKAVVER 635



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 9/141 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N ++   R +++ YG+  + TPL+     L       D     ++  
Sbjct: 263 GMPIFLPKGATILNELMSFSRQLHKEYGYKEVMTPLIMNVK-LWHQSGHWDHYKDNMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + +    +++             +         +YR  P+   E     R+ +      
Sbjct: 321 TEKEETEYAVKPMNCPG-------HILIYKNDVVSYRDLPIRLFEFGKVHRYERSGVLHG 373

Query: 134 DNVGSSAETADAEMCMMMADT 154
                +    DA +       
Sbjct: 374 LLRVRAFTQDDAHIFCRQDQI 394


>gi|94989937|ref|YP_598037.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|123258050|sp|Q1JI30|SYT_STRPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94543445|gb|ABF33493.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 647

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/378 (9%), Positives = 99/378 (26%), Gaps = 16/378 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +         Q D+  V    +  +  +  M       V 
Sbjct: 282 KELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVY 341

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 342 KNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRAL 401

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   +     ++  E+ +   +  K   +  +  +  
Sbjct: 402 QLIIDVY---ADFNLTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALD-EMDVDYF 457

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 458 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 506

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 507 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKT 566

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+RA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 567 LRDRGVRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTES 625

Query: 460 IKNNESWREARVAQITIP 477
           ++       A +A+ + P
Sbjct: 626 VEEFVENILADIARKSRP 643



 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 75/323 (23%), Gaps = 25/323 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F +
Sbjct: 260 GLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPV 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N           I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVRSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    I      I    ++ L  I++            
Sbjct: 359 GMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNLTDYRF 418

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           RL      D    +    +             +          +       L I ++ ++
Sbjct: 419 RLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMDVDYFEAEGEAAFYGPKLDIQVKTAL 478

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               E +                 + +   G     + I   ++  +E +T  + E   G
Sbjct: 479 -GNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKG 535

Query: 313 FPVMNEKQKPVVFGSVGGGGRYD 335
                     V    +      D
Sbjct: 536 AFPTWLAPHQVTVIPISNEAHID 558


>gi|21909901|ref|NP_664169.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896400|ref|NP_802750.1| threonyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|25453285|sp|Q8K8C0|SYT_STRP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21904088|gb|AAM78972.1| putative threonyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811651|dbj|BAC64583.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes SSI-1]
          Length = 647

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/378 (9%), Positives = 99/378 (26%), Gaps = 16/378 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +         Q D+  V    +  +  +  M       V 
Sbjct: 282 KELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVY 341

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 342 KNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRAL 401

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   +     ++  E+ +   +  K   +  +  +  
Sbjct: 402 QLIIDVY---ADFNLTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALD-EMGVDYF 457

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 458 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 506

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 507 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKT 566

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+RA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 567 LRDRGVRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTES 625

Query: 460 IKNNESWREARVAQITIP 477
           ++       A +A+ + P
Sbjct: 626 VEEFVENILADIARKSRP 643



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 75/323 (23%), Gaps = 25/323 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F +
Sbjct: 260 GLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPV 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N           I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVRSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    I      I    ++ L  I++            
Sbjct: 359 GMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNLTDYRF 418

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           RL      D    +    +             +          +       L I ++ ++
Sbjct: 419 RLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDIQVKTAL 478

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               E +                 + +   G     + I   ++  +E +T  + E   G
Sbjct: 479 -GNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKG 535

Query: 313 FPVMNEKQKPVVFGSVGGGGRYD 335
                     V    +      D
Sbjct: 536 AFPTWLAPHQVTVIPISNEAHID 558


>gi|196043419|ref|ZP_03110657.1| threonyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196025728|gb|EDX64397.1| threonyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 639

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 69/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEASLENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S  I+
Sbjct: 575 DMRDEK-LGYKIREAQMQKVPYILVIGDKEMENGAVNVR--KYGEEKSDVIE 623



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/257 (10%), Positives = 67/257 (26%), Gaps = 15/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      + +                      +  +    +  + 
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF------EYEVELSTRPEDS 429

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  ++ +      ++ L  + R +       G  +     D +         +   
Sbjct: 430 MGDDKLWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDF 489

Query: 254 ELYELVKGTIAGEKGFN 270
           ++ E        EK   
Sbjct: 490 QMPEKFDLNYIDEKNEK 506


>gi|15921730|ref|NP_377399.1| prolyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|74581041|sp|Q971B5|SYP_SULTO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15622517|dbj|BAB66508.1| 483aa long hypothetical prolyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 483

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 75/256 (29%), Gaps = 28/256 (10%)

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           +  E + L +      +  +E + I +           I       +         ++ I
Sbjct: 159 TFKEAHTLHETYEDAARQVDEAINIYKAFFDELGIPYMISKRPEWDKFAGAEYTIAFDTI 218

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           L    + +       G          +  +    + P         R+I  L ++    +
Sbjct: 219 LPDSRVLQIGTVHHLGQHFTKAFDFKIQRKDGSLDYPHQTSYGISDRVIAVLIAINGDDH 278

Query: 371 NI------KEMGPVLITTMDHDSDSLSKYQMYTQM----LRTAGIRAEMFLGSSKNFGNQ 420
                     +  V++     D ++ +K   Y +     L+  GI   +     K  G +
Sbjct: 279 GPVLNPVIAPIKVVIVPIPAKDEETTAKIINYAKEVGENLKNRGITVVIDDDKEKTPGEK 338

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               + +  PL I  G  E +   + IK                  R       ++P  +
Sbjct: 339 FYIWELKGVPLRIEIGPKELNNNTVYIK------------------RRDTFEGKSVPKDK 380

Query: 481 LVSTVKKILQENKEEI 496
            V  V  +L++ K ++
Sbjct: 381 AVEEVNTLLEKIKNDL 396



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +IR  +L  IR + +  G + +  PLL   D L K         + V
Sbjct: 32  PVKGMGVWMPYGFKIRQNVLQLIRKLLDETGHEEVLFPLLIPEDLLKKESEHIRGFEEEV 91

Query: 71  FSLQDDDGQW-----ISLRY 85
           +      G       ++LR 
Sbjct: 92  Y-WVTKGGSQDLDVKLALRP 110


>gi|118590655|ref|ZP_01548056.1| ATP phosphoribosyltransferase regulatory subunit [Stappia aggregata
           IAM 12614]
 gi|118436631|gb|EAV43271.1| ATP phosphoribosyltransferase regulatory subunit [Stappia aggregata
           IAM 12614]
          Length = 384

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 3/92 (3%)

Query: 30  LDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTA 89
           ++++  +++  G D +  P+L+ +D       ++ R  + ++     DG  + LR D T 
Sbjct: 15  IETVLGLFKAAGHDEVSPPILQPADVFLDLTGEDIR--RRLYLTSGTDGLDLCLRPDFTI 72

Query: 90  PLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           P+ R+     D +  P      GPVFR    G
Sbjct: 73  PVCRHHLA-QDAVKLPAAYCYNGPVFRQRPDG 103


>gi|312217649|emb|CBX97596.1| hypothetical protein [Leptosphaeria maculans]
          Length = 829

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/442 (11%), Positives = 106/442 (23%), Gaps = 49/442 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  ++   +R  Y  +GF+ + TP++ Y  SL +         + +FS+
Sbjct: 116 GSPLLLPNGAYVFQKLQAFLRAQYPQFGFEEVITPII-YKKSLWEKSGHWQNYAEDMFSV 174

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF-RQFIQCD 132
           Q             TA                       P    E +G            
Sbjct: 175 QGRG---------ATA---------------------EIPQAEAEDNGEFGLKPMNCPGH 204

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                    +           +                 R+                   
Sbjct: 205 CILFRDKVMSYRNLPVRYADFSALHRNEISGALTGLTRVRRFHQDDAHIFCRPDQILAEI 264

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              +       + FGL   KLLL     +N     +  +    Q+   +  +  +   + 
Sbjct: 265 EQTLKFVGMVYNTFGLGPYKLLLSTRPKENFIGTIEEWDRAEAQLSTALDNIGSEWAVNE 324

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG-----LEYYTGCVY 307
            +            K  N     +  ++       R  +             E       
Sbjct: 325 GDGAFYGPKIDIILKDSNGKEHQTATIQLDFQLPQRFDLQYQASPEEIEAGSEMSMDAGL 384

Query: 308 EAILGFPVMNEKQKPVVFGSVGGG--GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           +  L  PVM  +                Y G    +     PA   S+     ++   S 
Sbjct: 385 DTSLRRPVMIHRAIYGSIERFMALLIEHYAGKYPFWL-SPRPAIILSLNSDPKLLQHVSH 443

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +  +  +     + +   D   L       Q      +  ++   SS+  G ++  A 
Sbjct: 444 IQAVLSGVKASKEPVVSPPSDPKPLP--LSTIQ------LPIDID-TSSRPLGKKIAEAR 494

Query: 426 RRNCPLAIIQGTGERSRGMLQI 447
                  I+ G  E   G++ +
Sbjct: 495 TNKYNHIIVVGGREIEAGVMNL 516


>gi|229823243|ref|ZP_04449312.1| hypothetical protein GCWU000282_00541 [Catonella morbi ATCC 51271]
 gi|229787409|gb|EEP23523.1| hypothetical protein GCWU000282_00541 [Catonella morbi ATCC 51271]
          Length = 647

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/367 (10%), Positives = 97/367 (26%), Gaps = 26/367 (7%)

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
              Y+    + + K            ++  +          +      +   + I+  + 
Sbjct: 301 VDLYQTSGHWAHYKDDMFPPMDMGDGEMLVLRPMNCPHHMMIYKNDIHSYRELPIRIAEL 360

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD 225
                      G++ +    G     +R+  +   D         +K        D    
Sbjct: 361 -----------GMMHRYEKSGALSGLQRVREMTLNDAHIFVRPDQIKEEFI-RVLDLIKA 408

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
                 +T +    +      + EK   +     K     ++  +EL    +     G  
Sbjct: 409 VYHDFGIT-DYRFRLSYRDPENKEKYFDDDAMWEKAQAMLKEAMDEL--GLDYFEAIGEA 465

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +          +        +    L F +        V          +      +   
Sbjct: 466 AFYGPKLDIQFKTAIGLEETMSTIQLDFLLPERFDLTYVG---------EDGQDNHRPVV 516

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +     S     +   ++  + +         V +  +  ++ S  + Q   + L+  G 
Sbjct: 517 IHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQVALLPVSLEAHS-DRVQEIYEDLKAKGF 575

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           R +M L  ++  G +++ A     P  I+ G  E S G + ++     K  S    +   
Sbjct: 576 RVDMDL-RNEKLGYKIRSAQTAKIPYQIVIGDQEVSEGTVNVRHYGSAKSESYSYDDFVR 634

Query: 466 WREARVA 472
                VA
Sbjct: 635 LLSEDVA 641


>gi|225621231|ref|YP_002722489.1| ATP phosphoribosyltransferase regulatory subunit [Brachyspira
           hyodysenteriae WA1]
 gi|225216051|gb|ACN84785.1| ATP phosphoribosyltransferase regulatory subunit [Brachyspira
           hyodysenteriae WA1]
          Length = 373

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/373 (14%), Positives = 121/373 (32%), Gaps = 15/373 (4%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG-VFSLQDDDGQWISLR 84
            N I   +  IYE YG+  I+    E  +    +   +D      + +  + +G   SLR
Sbjct: 3   ENNIASKLTKIYEQYGYKKIKLSKFEDYNLYNNY---KDFLQTEHILTFMNLNGNLQSLR 59

Query: 85  YDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
            D+T  + + V                             + +  Q  V+ +G+ +  ++
Sbjct: 60  PDVTLSIVKKV---LKDNNKYTNKIYYIEDIYKIDSVSNEYEEIQQVGVEIIGTLSTYSN 116

Query: 145 AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
            E+  M  D+L+++    ++Y + I++   +  +++++ L  D KL     +        
Sbjct: 117 LEIISMAVDSLKSIN---DEYILEISSIDFMFALIDELNLEEDKKLEILNFIYSKNKHDL 173

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA 264
           +  L  +   + +   +N            + +  + + +  D  +  ++  + +     
Sbjct: 174 EKTL--ISNNIDDKYKNNIISLIDLCGNYRDILKKIENIIINDKMQKAYDELKSLSAVFE 231

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE---AILGFPVMNEKQK 321
               F+++++   +  K GY +  I             +G  Y+   A       NEK K
Sbjct: 232 NYNNFDKILLDFSIESKLGYYNGIIFKGYIKGNNDAVLSGGRYDKLLAKFNAHTQNEKNK 291

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
               G      +     +     +             I+  K       N K    +   
Sbjct: 292 KNAIGFAVYMDKLYVNDTDKNEYDFDILILYKSGDEKILLSKVQSFIKENKKVRTDIYSD 351

Query: 382 TMDHDSDSLSKYQ 394
             + D     KY 
Sbjct: 352 NYNTDYSYKEKYI 364


>gi|295099750|emb|CBK88839.1| threonyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 391

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 3/118 (2%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
               I R I  L    +    +       +    H    L   Q   + L+ AG+R E+ 
Sbjct: 264 IYGSIERFIGILIEHFAGHFPLWLAPRQFVVIPVHQEKHLEYAQKVVKALQDAGMRVELD 323

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              ++  G +++ A     P  I+ G GE     + I+    GK+ S+ +  NE+  +
Sbjct: 324 -DRNEKLGYRVREAQMSKVPYQIVVGDGEAENETVTIR--QSGKKESKTMALNEALEK 378



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G        + +RN +       +   G+  I+TP++   + L +     +   + +++ 
Sbjct: 12 GMPIFLPNGMILRNILEQFWYEEHTKAGYQFIKTPIMMSKE-LWETSGHWEHYKENMYTT 70

Query: 74 QDDDGQWISLRYDLTAP 90
             D +  +++      
Sbjct: 71 M-VDDREFAIKPMNCPG 86


>gi|239917575|ref|YP_002957133.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Micrococcus
           luteus NCTC 2665]
 gi|281413939|ref|ZP_06245681.1| threonyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259516574|sp|C5CBI2|SYT_MICLC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239838782|gb|ACS30579.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Micrococcus
           luteus NCTC 2665]
          Length = 672

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 6/112 (5%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +     V I   +  +D L         LR  GIRA +   S + F  +++ A 
Sbjct: 564 GAFPAWLAPEQVVAIPVAEAFNDYLDD---VVAKLRAEGIRARLDDSSDR-FPKKIRTAA 619

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQITI 476
           +   P  +I G  +R  G +  +    G + +   ++         V +  +
Sbjct: 620 KEKAPFVLIAGGEDREAGAVSFR-FRDGTQDNGVPVEEAIERIVKAVREREV 670


>gi|73662391|ref|YP_301172.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123761534|sp|Q49YB4|SYT_STAS1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72494906|dbj|BAE18227.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 645

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/402 (10%), Positives = 107/402 (26%), Gaps = 36/402 (8%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +           +   + +         Q D+       E  +  +  M  
Sbjct: 279 RYIVDK--EVSMGYDHVYTPVMANVDLYKTSGHWDHYQEDMFPTMKLDEYEEMVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                +   +   +  +  R    G + +    G     +R+  +   D         +K
Sbjct: 337 PHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQIK 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI-DLEKSMHELYELVKGTIAGEKGFNE 271
                        +    +   E     +S+    D EK   +    +K     ++  +E
Sbjct: 397 EEFKRVVNLIIDVYN---DFNFENYSFRLSYRDPEDKEKYFDDDEMWIKAESMLKEAVDE 453

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L +  E           I  ++     L+                           +   
Sbjct: 454 LGLDYE---------EAIGEAAFYGPKLDVQVQTAMGKEETLSTAQLDFLLPQKFELTYI 504

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           G                +        +    +  + +         V I  ++ D     
Sbjct: 505 GNDGEQHRPVVIHRGVVSTME---RFVAFLTEETKGAFPTWLAPKQVEIIPVNVD-LHYD 560

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             ++    L++ G+R E+    ++  G +++ A  +  P  ++ G  E     + ++   
Sbjct: 561 YARLIQDELKSQGVRVEID-DRNEKMGYKIREAQMQKIPYQLVVGDKEVENKEVNVRKYG 619

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
              + + E K+   W              LV  ++  L++ +
Sbjct: 620 SQDQETLE-KDEFIW-------------NLVDEIR--LKKQR 645


>gi|16079947|ref|NP_390773.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310836|ref|ZP_03592683.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315161|ref|ZP_03596966.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221324361|ref|ZP_03605655.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|135175|sp|P18255|SYT1_BACSU RecName: Full=Threonyl-tRNA synthetase 1; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|143766|gb|AAA22864.1| (thrSv) (EC 6.1.1.3) [Bacillus subtilis]
 gi|1769999|emb|CAA99608.1| threonyl-tRNA-synthetase [Bacillus subtilis]
 gi|2293284|gb|AAC00362.1| threonine tRNA synthetase [Bacillus subtilis]
 gi|2635360|emb|CAB14855.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 643

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/456 (11%), Positives = 113/456 (24%), Gaps = 83/456 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G++ + TP+L   +         D   +G+F  
Sbjct: 265 GLPLWLPKGATIRRVIERYIVDKEISLGYEHVYTPVLGSKELYETS-GHWDHYQEGMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNETLVLRPMNCP-------HHMMIYKQDIHSYRELPIRIAELGTMHRYEMSGALS- 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                   T +     +  D ++   I+       +     L     ++     +   + 
Sbjct: 376 GLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYEDFGLSDYTFRLSYRDPEDTEKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +K      + +  +  +           G  L  +    +    ++   +   
Sbjct: 436 FDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDF 495

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
            L E    T  GE G                          ++      T   + A L  
Sbjct: 496 LLPERFDLTYIGEDGKQH--------------------RPVVIHRGVVSTMERFVAFLIE 535

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                             G     ++  + Q +P +                        
Sbjct: 536 E---------------HKGALPTWLAPVQFQVIPVSPAVHLDYA---------KKVQERL 571

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           +   + +     D             +R A                Q++       P  +
Sbjct: 572 QCEGLRVEVDSRDE-------KIGYKIREA----------------QMQK-----IPYML 603

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           + G  E   G + ++    G++ S  I  +E  ++A
Sbjct: 604 VVGDQEAENGAVNVR--KYGEQNSETISLDEFVKKA 637


>gi|319651798|ref|ZP_08005923.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396450|gb|EFV77163.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 643

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/360 (8%), Positives = 89/360 (24%), Gaps = 25/360 (6%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M     +       +   I  N       +  +I   G     
Sbjct: 309 TSGHWDHYQEDMFPVMEMDNEQLVLRPMNCPHHMMIYKNGIHSYRELPIRIAELGTMHRY 368

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L  + ++    L    + +   +            L   +   +  +      + 
Sbjct: 369 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVHLILEVYKDFDINDYSFRLSYRD 428

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +  +        EK    L    + +    + +     ++     L+           
Sbjct: 429 PQDTEKYFDDDEMWEKAQAMLKEAMDEIGLDYFEAEG--EAAFYGPKLDVQVKTALGKDE 486

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               +           +                    +        +   ++  + +   
Sbjct: 487 TLSTVQLDFLLPERFDLTYVAEDGKPHRPVVIHRGVVSTME---RFVAFLIEEYKGAFPT 543

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +  +  D       +   + L+  G R E+    ++  G +++ A  +  P 
Sbjct: 544 WLAPVQVQVIPVSPDI-HFDYAKQVREQLQAEGFRVELD-DRNEKIGYKIREAQMQKTPY 601

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            ++ G  E +   + ++    G++ S                 T+   + +S +K  ++ 
Sbjct: 602 MLVVGDNEVAEKAVNVR--KYGEQKS----------------ETVSFEDFISALKAEVKR 643



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 8/110 (7%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   IR  I   I +  E  G+D + TP++   D   K     D   + +F + + D
Sbjct: 269 WLPKGATIRRNIERYIVDKEERLGYDHVYTPIMGSVDLY-KTSGHWDHYQEDMFPVMEMD 327

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + + LR             +         +YR  P+   E     R+  
Sbjct: 328 NEQLVLRPMNCP-------HHMMIYKNGIHSYRELPIRIAELGTMHRYEM 370


>gi|305432763|ref|ZP_07401922.1| threonine--tRNA ligase [Campylobacter coli JV20]
 gi|304444160|gb|EFM36814.1| threonine--tRNA ligase [Campylobacter coli JV20]
          Length = 610

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +      ++  +   + L    I +E++   +++   +++ A+++  P+ ++ G  E
Sbjct: 515 VGIVPISDSHIAYAKEIQRALLELNIDSEVY-EKNESLSKKIRTAEKQKLPMILVLGDEE 573

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++  + ++D    ++ +  +       + +++++
Sbjct: 574 VAKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEV 608


>gi|145640807|ref|ZP_01796389.1| prolyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274321|gb|EDK14185.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 125

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R     G  +     IR+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MLRAGMIRPMA-SGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAE-LWEES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              ++    +   +D   +   L  
Sbjct: 84  GRWEQYGPELLRFEDRGNRNFVLGP 108


>gi|262067494|ref|ZP_06027106.1| threonine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378856|gb|EFE86374.1| threonine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 637

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 40/102 (39%), Gaps = 2/102 (1%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  +  + + +   +     L+  GIRAE+    ++  G +++ A+ +   P
Sbjct: 532 PMWLAPVQVKVLTLNDECIPYAKEIMDKLQELGIRAELD-DRNETIGYKIREANGKYKIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + +I G  E     + I+      +  + +     +     A
Sbjct: 591 MQLIIGKNEVENKEVNIRRFGSKDQFPKSLDEFYDYVVDEAA 632



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K +  RN ++D  R  +E  G+  +ETP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPIMLNKE-LWEISGHWFNYRENMYT 317


>gi|328944057|ref|ZP_08241522.1| proline--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327492026|gb|EGF23800.1| proline--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 616

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 40/136 (29%), Gaps = 22/136 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
                          V +  +D HD       Q   + L  AGI   +   G        
Sbjct: 499 DEHGIIWPVSVAPYEVAVIPLDVHDETVWPVAQRLAEGLIKAGIEVIVDDRGERPGIK-- 556

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
              AD    P  ++ G    +   +++K+ A G+                     +P+ E
Sbjct: 557 FNDADLMGFPYQVVCGKKALAHACVEVKNRATGERT------------------EVPVDE 598

Query: 481 LVSTVKKILQENKEEI 496
           +V  +   +   ++ +
Sbjct: 599 VVDHLVHEIVPQRQGL 614



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 21/79 (26%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R   +I   IR   E      +  P+L  ++ L          
Sbjct: 76  MIRKAAAGLYSYLPLAWRSIQKIESIIREEMEAIDAQEMLAPILTDAE-LWHQSGRWGAY 134

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L D      +L  
Sbjct: 135 GPELMRLTDRHDHEYALGP 153


>gi|134299814|ref|YP_001113310.1| prolyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044305|sp|A4J5Y2|SYP_DESRM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134052514|gb|ABO50485.1| prolyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 569

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  ++   IR   +  G   +  P+++ ++   +           
Sbjct: 34  KTASGVYTYLPLAQRVLKKLRQIIREEIDKQGGQELLMPIIQPAEMWLES-GRWHVYGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +F L+D   +   L  
Sbjct: 93  LFRLKDRHDRNFCLGP 108



 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 1/96 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     ++I     D + +   +   + L  AG+   +   S +  G + K AD 
Sbjct: 463 IWPASIAPYQAIVIPVAPKDDNQMKIAEELYKALNQAGVETILDDRSER-PGVKFKDADL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              PL I+ G    + G+++I+    G+     +K+
Sbjct: 522 IGYPLRIVVGNKAVTEGVVEIRQRRSGQTDLVSVKD 557


>gi|311031377|ref|ZP_07709467.1| threonyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 643

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/373 (11%), Positives = 100/373 (26%), Gaps = 22/373 (5%)

Query: 92  ARYVAENF---DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            R V E +     +           +   E +         Q  +               
Sbjct: 276 IRRVIERYIVDKEVELGYDHVYTPVMGSVELYKTSGHWDHYQDGMFPPMEMDNEQLVLRP 335

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
           M     +       + Y         L G + +  + G     +R+  +   D       
Sbjct: 336 MNCPHHMMVYKNSIHSYRQLPVRIAEL-GTMHRYEMSGALAGLQRVRGMTLNDAHIFVRP 394

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
             +K  L +   +   +  K   L  +    +      + EK   +     K     ++ 
Sbjct: 395 DQIKDEL-KRVVNLVLEVYKDFGL-DDYSFRLSYRDPENKEKYFDDDAMWEKAQGMLKEA 452

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
            +EL    +        +         VR        +    L F +  +     V    
Sbjct: 453 MDEL--GLDYFEAIDEAAFYGPKLDVQVRTALGKEETLSTVQLDFLLPEKFDLTYVGED- 509

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
                      + +   +     S     +   ++  + +         V +  +  D+ 
Sbjct: 510 ---------GKQHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTWLAPVQVQVIPVSPDA- 559

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                +    +L++ GIR EM    ++  G +++ A  +  P  ++ G  E     + ++
Sbjct: 560 HFDYAKEVQDLLKSKGIRVEMD-ERNEKIGYKIREAQMQKIPYMLVLGDNEIQERAVNVR 618

Query: 449 DLAKGKELSREIK 461
               G++ S  I 
Sbjct: 619 --KYGEQKSETIS 629


>gi|264679166|ref|YP_003279073.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262209679|gb|ACY33777.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 687

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/258 (9%), Positives = 69/258 (26%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R +Y++ G+  ++ P +     L +     D+  + +F+ 
Sbjct: 309 GTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQI-LDKGLWEKTGHWDKYRENMFT- 366

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D + +  +L+            +   +       +         +              
Sbjct: 367 TDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLRFGEFGNCHRNEPTGSLHGIMRVRAF 426

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     + ++   +      +     D+            IL ++    + ++   
Sbjct: 427 TQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFTN--------ILYRLSTRPEKRIGTD 478

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                A DK +    +G++    E           G  +     D +         +   
Sbjct: 479 E----AWDKAENALAEGLRASGCEFEYLPGEGAFYGPKIEYTLKDALGREWQCGTIQVDP 534

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 535 NMPERLDAEFVGEDGERH 552


>gi|269795047|ref|YP_003314502.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Sanguibacter
           keddieii DSM 10542]
 gi|269097232|gb|ACZ21668.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Sanguibacter
           keddieii DSM 10542]
          Length = 676

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                LR AG+RA++   S + F  +++ A  +  P  +
Sbjct: 574 WLAPVQVLAVPVAEPFNDYLADVVAQLRKAGVRADLDDSSDR-FAKKIRTASTQKIPFVL 632

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           I G  +   G +  +     +E    +     
Sbjct: 633 IAGGEDAEAGAVSFRYRDGRQENGVPVAEAIE 664


>gi|218438366|ref|YP_002376695.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218171094|gb|ACK69827.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 608

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +      L   +     +R+ GIRAE    S +  G  ++ A+++  P+  
Sbjct: 506 WLAPIQVRLLPVSDPQLDYAKQVAAQMRSQGIRAE-ADTSGERLGKMIRNAEKQKIPVMG 564

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     L I+  A G+  +  +          +A  T
Sbjct: 565 VVGAKEVESNTLSIRTRASGELGTMAVNEVIEKVTEAIANYT 606



 Score = 40.6 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR+ + D ++      G+ P+ TP +   D   K         + +F
Sbjct: 222 GLPLWTPKGAIIRSTLEDFLKKEQIKRGYLPVVTPHIARIDLF-KISGHWQNYKEDMF 278


>gi|78044971|ref|YP_360408.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123770579|sp|Q3ABS6|SYT_CARHZ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77997086|gb|ABB15985.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 634

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + +  R  +   G+  I+TP++   +   +         + ++  
Sbjct: 261 GFPFFHPKGMVIRNELENFWREKHRLAGYQEIKTPIILNRELWERS-GHWAHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q  +++      
Sbjct: 319 TKIDDQDYAIKPMNCPG 335



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 15/114 (13%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          Q   Q L   G+R E+    ++  G +++    +  P  +
Sbjct: 534 WLSPVQVRVITVAERHREYGQEIYQKLFNQGVRVELD-DRNETIGYKIREGQMQKIPYLL 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           I G  E  +G + ++    G    +                   I EL++ +++
Sbjct: 593 IVGDKEIEQGSVAVRKRGVGDLGQKPFAEF--------------IEELLAEIRE 632


>gi|17547535|ref|NP_520937.1| prolyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|81849506|sp|Q8XVL4|SYP_RALSO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|17429839|emb|CAD16523.1| probable prolyl-trna synthetase protein [Ralstonia solanacearum
           GMI1000]
          Length = 574

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 53/140 (37%), Gaps = 6/140 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P+++ ++ L +     D+ 
Sbjct: 31  MIKKLGAGLYTYMPVGLRVIRKVEQIVREEMNASGAVEVLMPVVQPAE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + + ++    ++   +AR    ++  +      Y+I   FR+E+    
Sbjct: 90  GDEMMRVKDRHERDLVIQPTSEEVVTDIARTEIRSYKQMP--VNFYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETA 143
              +  +  + +  S    A
Sbjct: 148 GIMRGREFTMKDAYSFDRDA 167



 Score = 43.3 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 3/87 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  + +D      ++       L  AGI   +     +  G  
Sbjct: 463 DARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAELAAAGIDVILD-DRGERPGAM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQI 447
               +    P  ++ G      G L++
Sbjct: 522 FADWELIGVPFRVVVGERGLKDGKLEL 548


>gi|266620391|ref|ZP_06113326.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288868018|gb|EFD00317.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 633

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 38/101 (37%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +     + +  +     L+   IR E+     +  G +++ A     P  +
Sbjct: 533 WLAPVQVKVLPISDKNAAYAKDVYNTLKKNHIRCEID-ERPEKIGYKIREAQLEKVPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G  E     + ++    G+ ++  +++     +  + + 
Sbjct: 592 VAGAKEEENHTVAVRYRDSGENVTMSVEDFAEMLKKEIEER 632



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N + +  R I+E  G+  I TP++  + SL +     D   + +++ 
Sbjct: 260 GFPFFLPKGMVLKNALTNFWREIHEREGYVEIATPIM-LNRSLWETSGHWDHYKENMYT- 317

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 318 TTIDDTEFAIKPMNCPG 334


>gi|190891876|ref|YP_001978418.1| threonyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|238692487|sp|B3PNV4|SYT_RHIE6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190697155|gb|ACE91240.1| threonyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 668

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/365 (10%), Positives = 102/365 (27%), Gaps = 10/365 (2%)

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG- 168
            +      +       +       +  G      +    +  A  +     K  D  +  
Sbjct: 282 YMRRRLAADYQEVNAPQVLDTSLWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRVFA 341

Query: 169 ---INNRKILDGILEKIGLHGDDKLNERLIVL--RAIDKLDKFGLQGVKLLLGEGRTDNS 223
              +N    +      +  + +  +      L  R        GL  V+    +      
Sbjct: 342 LKPMNCPGHVQIFKHGLKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFC 401

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
            D    A        I+  +     ++ + +L    +  +  +  ++    +   V K+ 
Sbjct: 402 TDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTI 461

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
              +  +I + I+ G   + G  +E  L   +  E Q            R+         
Sbjct: 462 EAQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNS 521

Query: 344 QNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           +            G     + +     + +    + P+ +      S++ +      + L
Sbjct: 522 EKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEAL 581

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R AG+  E     ++    +++       P+ I+ G  E     + I+ L    ++S  +
Sbjct: 582 RDAGLNVETDF-RNEKINYKIREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGL 640

Query: 461 KNNES 465
                
Sbjct: 641 DAAVE 645


>gi|304314183|ref|YP_003849330.1| glycyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587642|gb|ADL58017.1| glycyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 564

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 2/100 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   V +  + +  + +       + LR +G  AE    SS   G +   +D    
Sbjct: 463 PPHVAPVEVSVFPLVNKKEMVEVALEIKRKLRKSGFIAEFD--SSGTIGRRYARSDEIGV 520

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           P A+         G + ++      ++  +I+  +S  E 
Sbjct: 521 PFAVTVDHETLEDGTVTLRSRDDCSQIRLKIEELDSKLEE 560



 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
          GF D       ++N+I++  R  Y    GF  IE+P +   ++L K     D  N  +
Sbjct: 29 GFVDYGPLGATLKNKIMNRWREFYVVREGFYEIESPTIMPEEAL-KASGHVDHFNDPM 85


>gi|212639527|ref|YP_002316047.1| prolyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212561007|gb|ACJ34062.1| Prolyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 568

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 44/157 (28%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         R+  +I   IR   E  G   +  P L+ ++ L +           
Sbjct: 38  QNASGVYSFLPLGKRVLQKIEAIIREEMERAGAVELLMPALQQAE-LWQESGRWYSYGPE 96

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  L+D   +  +L     ++   L R   +++  +          +R     R      
Sbjct: 97  LMRLKDRHERDFALGATHEEVITALVRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 156

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F             S +    +M    A+     G
Sbjct: 157 REFIMKDAYSFHASHESLDEVYNKMYEAYANVFRRCG 193



 Score = 39.8 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 41/123 (33%), Gaps = 20/123 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +      LI+      +       +   L+  G    ++   ++  G +   +D 
Sbjct: 466 IWPTAVAPFHVHLISVNPKVDEQRELADEWYVQLQQEGFEV-LYDDRAERPGVKFADSDL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ +  G    S G++++K    G+                     + +S+LV T++
Sbjct: 525 IGLPVRVTVGKR-ASEGIVEVKVRKTGE------------------TEEVHVSQLVETLR 565

Query: 487 KIL 489
           + L
Sbjct: 566 RYL 568


>gi|52080260|ref|YP_079051.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52785637|ref|YP_091466.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319645960|ref|ZP_08000190.1| prolyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81825303|sp|Q65JJ1|SYP_BACLD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|52003471|gb|AAU23413.1| prolyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52348139|gb|AAU40773.1| ProS [Bacillus licheniformis ATCC 14580]
 gi|317391710|gb|EFV72507.1| prolyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 572

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/533 (10%), Positives = 132/533 (24%), Gaps = 76/533 (14%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++ ++I   +R   E      +  P L+ +++  +           +  
Sbjct: 37  SGVYSYMPLANKVIHKIQSIVREEMEKINAVEMLMPALQQAETWQES-GRWYTYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG----------------- 112
           L+D  G+  +L     ++   + R   +++  +       +                   
Sbjct: 96  LKDRHGREFALGATHEEVITSIVRDEVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREF 155

Query: 113 ------PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA------DTLEAVGI 160
                     + +     +    Q   +            +    A          A+  
Sbjct: 156 IMKDAYSFHSSAESLDETYNDMYQAYTNVFTRCGLNFRPVIADSGAMGGKDTHEFMALSD 215

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
              D     +       I        D      +  L+ +       ++ V   LG   +
Sbjct: 216 VGEDTIAYSDQSSYAANIEMAEVKETDAGEQAEMKELQEVHTPSVKTIEEVAAFLGISPS 275

Query: 221 DNSGDFTKGAN------------------LTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
           D        A+                  + +     ++ F S +    +        G 
Sbjct: 276 DCIKSMLMKADGRFVLVLTRGDHEVNDVKVKNLLQAEIIEFASAEEVAEITGTEPGFVGP 335

Query: 263 IAGE---KGFNELVVISELVRKSGYNSNRIKISSTIV-RGLEYYTGCVYEAILGFPVMNE 318
           +  +   + F +  V +     +G N       +  + R     T      I       +
Sbjct: 336 VGLDREIEIFADFAVKAMANAAAGANKTDYHYQNVNISRDAHNVTFADLRFIQEGDPSPD 395

Query: 319 --------KQKPVVFGSVGG---GGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSL 365
                   K   V      G       D       G+  P     + IGISR + A+   
Sbjct: 396 GKGTIRFAKGIEVGQVFKLGTRYSEAMDATYLDENGRAQPMLMGCYGIGISRTLSAIVEQ 455

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                       +      ++     +   +   +   +  +  G        + +  G 
Sbjct: 456 HHDDKGLIWPLEVTPYDLHILALNMKNDAQVQLAEKLYEEFKANGYDVLFDDRAERA-GV 514

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +   +D    P+ I  G      G++++K    G+           + E +V 
Sbjct: 515 KFADSDLIGLPIRITVGKR-ADEGVVEVKIRKTGESFEIAADELFDFIEKQVK 566


>gi|221066194|ref|ZP_03542299.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220711217|gb|EED66585.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 639

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/258 (9%), Positives = 69/258 (26%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R +Y++ G+  ++ P +     L +     D+  + +F+ 
Sbjct: 261 GTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQI-LDKGLWEKTGHWDKYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D + +  +L+            +   +       +         +              
Sbjct: 319 TDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLRFGEFGNCHRNEPTGSLHGIMRVRAF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     + ++   +      +     D+            IL ++    + ++   
Sbjct: 379 TQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFTN--------ILYRLSTRPEKRIGTD 430

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                A DK +    +G++    E           G  +     D +         +   
Sbjct: 431 E----AWDKAENALAEGLRASGCEFEYLPGEGAFYGPKIEYTLKDALGREWQCGTIQVDP 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 487 NMPERLDAEFVGEDGERH 504


>gi|19745635|ref|NP_606771.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|94988057|ref|YP_596158.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94991943|ref|YP_600042.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|139474254|ref|YP_001128970.1| threonyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|306827837|ref|ZP_07461106.1| threonine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|25453286|sp|Q8P234|SYT_STRP8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123080426|sp|Q1JMY5|SYT_STRPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123382336|sp|Q1JD10|SYT_STRPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225506|sp|A2RFY5|SYT_STRPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|19747765|gb|AAL97270.1| putative threonyl-tRNA synthetase 1 [Streptococcus pyogenes
           MGAS8232]
 gi|94541565|gb|ABF31614.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545451|gb|ABF35498.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|134272501|emb|CAM30764.1| threonyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|304429946|gb|EFM32986.1| threonine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 647

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/378 (9%), Positives = 99/378 (26%), Gaps = 16/378 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +         Q D+  V    +  +  +  M       V 
Sbjct: 282 KELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVY 341

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 342 KNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRAL 401

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   +     ++  E+ +   +  K   +  +  +  
Sbjct: 402 QLIIDVY---ADFNLTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALD-EMGVDYF 457

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 458 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 506

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 507 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKT 566

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+RA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 567 LRDRGVRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTES 625

Query: 460 IKNNESWREARVAQITIP 477
           ++       A +A+ + P
Sbjct: 626 VEEFVENILADIARKSRP 643



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 75/323 (23%), Gaps = 25/323 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F +
Sbjct: 260 GLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPV 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N           I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVRSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    I      I    ++ L  I++            
Sbjct: 359 GMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNLTDYRF 418

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           RL      D    +    +             +          +       L I ++ ++
Sbjct: 419 RLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDIQVKTAL 478

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               E +                 + +   G     + I   ++  +E +T  + E   G
Sbjct: 479 -GNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKG 535

Query: 313 FPVMNEKQKPVVFGSVGGGGRYD 335
                     V    +      D
Sbjct: 536 AFPTWLAPHQVTVIPISNEAHID 558


>gi|254730106|ref|ZP_05188684.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
          Length = 213

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 41  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 99

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
           QD   + +       ++   + R    ++  +       +                  F 
Sbjct: 100 QDRQKREMLFGPTNEEMVTDIFRSYVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFL 159

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
                  D     A+ A   M +    T   VG++     
Sbjct: 160 MKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMR 199


>gi|254511426|ref|ZP_05123493.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221535137|gb|EEE38125.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 456

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/460 (10%), Positives = 116/460 (25%), Gaps = 63/460 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  ++ + +       G   I+ P+L+ +D L +     D  
Sbjct: 41  MIKQAAAGIYSWLPLGFKVLRKLENIVHEEQARAGHIAIQMPILQSAD-LWRESGRYDGY 99

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  ++D   + +       +L   + R    ++  +      Y+I   FR+E     
Sbjct: 100 GQEMLRMKDRHDRDMLFTPTAEELVTDIFRGHVSSYKDLP--LTLYQIQWKFRDEIRPRF 157

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 158 GVMRGREFYM----------------------------KDGYNFDLTMEDALHAYNRHLV 189

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +         G       L    T  S  F   A       D  + +
Sbjct: 190 SYLRTYERMGLQAIPMRADSGPIGGDYTHEFLVLAETGESEVFYDSAVTDLTFGDRDIDY 249

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            + D  +++  + E        ++  +E                  +    + RG+E   
Sbjct: 250 DNRDQCQAI--MDEFTSKYARTDETHDE-----------ALFDQVPEDRRRVARGIEVGQ 296

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +       +    Q P            DG        +       +  + +  +  
Sbjct: 297 IFYFGTNYSEAMGATVQGP------------DGKPVPVHMGSHGIGVSRLIGAIIEASHD 344

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAE-MFLGSSKNFGNQL 421
                           I  +    D            L   G+  E ++    +  G + 
Sbjct: 345 DKGIIWPEGVTPFHCGIVNLKQGDDEADAACDTLYAALTALGL--EPLYDDRKERAGGKF 402

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              D    P  I  G      G++++     G+      +
Sbjct: 403 ATMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEELSPE 442


>gi|81429010|ref|YP_396010.1| threonyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123742216|sp|Q38VT0|SYT_LACSS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78610652|emb|CAI55703.1| Threonyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 656

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 51/186 (27%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G++ + TP+L   D   K     D   + +F  
Sbjct: 263 GLPYWLPNGATIRRSIERYIIDKEVANGYEHVYTPILANLDLY-KQSGHWDHYREDMFPP 321

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 322 MDMGDGEMLELRPMNCPSHIQVYKHHPRSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 381

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +     +  +M D      I    + +   +    +   +   + 
Sbjct: 382 MTLNDGHTFVRPDQIQDEFKSILGLMIDVYADFNINDYTFRLSYRDPANTEKYFDDDEMW 441

Query: 186 GDDKLN 191
              +  
Sbjct: 442 NKAQAM 447



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 39/130 (30%), Gaps = 3/130 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L  +              +     +      
Sbjct: 503 HYVGEDGEMHRPVMIHRGLVSTMERFTAYLTEIYKGAFPTWLAPTQAVIIPVKNDLHYDY 562

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     +   G+R  +    ++  G +++ A     P  ++ G  E ++  + ++    
Sbjct: 563 AKNIKDEMIKRGLRVRID-DRNEKMGYKIREAQTSKIPYTLVVGDQELAQATVSVR--KY 619

Query: 453 GKELSREIKN 462
           G+E + E  +
Sbjct: 620 GEENAVEEAS 629


>gi|16078720|ref|NP_389539.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309535|ref|ZP_03591382.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221313859|ref|ZP_03595664.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221318782|ref|ZP_03600076.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323054|ref|ZP_03604348.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|321315424|ref|YP_004207711.1| prolyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|11134893|sp|O31755|SYP_BACSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2634029|emb|CAB13530.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|291484212|dbj|BAI85287.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320021698|gb|ADV96684.1| prolyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 564

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 58/531 (10%), Positives = 136/531 (25%), Gaps = 76/531 (14%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++   I   +R   E      +  P L+ +++  +           +  
Sbjct: 37  SGVYSYMPLAYKVIQNIQQIVREEMEKIDAVEMLMPALQQAETWQES-GRWYTYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRF 125
           L+D  G+  +L     ++   L R   +++  +          +R     R        F
Sbjct: 96  LKDRHGREFALGATHEEVITSLVRDEVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK--------ILDG 177
                        S +    +M    ++     GI                      L  
Sbjct: 156 IMKDAYSFHASAESLDETYQKMYEAYSNIFARCGINVRPVIADSGAMGGKDTHEFMALSA 215

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL--LGEGRTDNSGDFTKGANLTSE 235
           I E    + D+      I +  +   +    +  K L  +         + T    +++E
Sbjct: 216 IGEDTIAYSDESQYAANIEMAEVLHQEVPSDEEPKALEKVHTPNVKTIEELTAFLQVSAE 275

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN----ELVVISELVRKSGYNSNRIKI 291
                V F + D    +    +     I  +   +    EL    E++++ G     +  
Sbjct: 276 ACIKSVLFKADDRFVLVLVRGDHEVNDIKVKNLLHAEVVELATHEEVIQQLGTEPGFVGP 335

Query: 292 SSTIVR---GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP- 347
                      +     +  A+ G    +   K V          +  L    +G   P 
Sbjct: 336 VGIHQDVEVYADQAVKAMVNAVAGANEGDHHYKNVNVNRDAQIKEFADLRFIKEGDPSPD 395

Query: 348 ------------------------------------------ATGFSIGISRLIVALKSL 365
                                                        + IG+SR + A+   
Sbjct: 396 GKGTIRFAEGIEVGQVFKLGTRYSEAMNATYLDENGRAQPMLMGCYGIGVSRTLSAIAEQ 455

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                      ++      ++     +       +     L+  G    ++   ++  G 
Sbjct: 456 HHDEKGLIWPKSVAPYDLHILALNMKNDGQRELAEKLYADLKAEGYEV-LYDDRAERAGV 514

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           +   +D    P+ I  G      G++++K    G+     +    ++   +
Sbjct: 515 KFADSDLIGLPIRITVGKR-ADEGIVEVKIRQTGESTEISVDELSAFISKQ 564


>gi|118138193|pdb|2I4L|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase
 gi|118138194|pdb|2I4L|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase
 gi|118138195|pdb|2I4L|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase
 gi|118138196|pdb|2I4M|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Proams
 gi|118138197|pdb|2I4M|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Proams
 gi|118138198|pdb|2I4M|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Proams
 gi|118138199|pdb|2I4N|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Cysams
 gi|118138200|pdb|2I4N|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Cysams
 gi|118138201|pdb|2I4N|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Cysams
 gi|118138202|pdb|2I4O|A Chain A, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Atp
 gi|118138203|pdb|2I4O|B Chain B, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Atp
 gi|118138204|pdb|2I4O|C Chain C, Rhodopseudomonas Palustris Prolyl-Trna Synthetase In
           Complex With Atp
          Length = 458

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/454 (11%), Positives = 112/454 (24%), Gaps = 58/454 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R      G   +  P L+ +D L +     D         
Sbjct: 58  GIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLAD-LWRESGRYDAYG------ 110

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                       ++     R    +                          + +  +   
Sbjct: 111 -----------PEM----LRIADRHKRE------LLYGPTNEEMITEIFRAYIKSYKSLP 149

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            N+         E             + ++ Y   ++         +    +        
Sbjct: 150 LNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFARMG 209

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  +             ++   G    D S +F   A      + I    L++ +     
Sbjct: 210 LKAI------------PMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVP---D 254

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRGLEYYTGCVYEAILG 312
           E  +         K +  +   +E V +     + +  ++    RG+E      +     
Sbjct: 255 ENVDYDGDLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYS 314

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
             +      P    +   GG Y   VSR  G  + A                        
Sbjct: 315 DSMKANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACH------------DDNGIIWPEA 362

Query: 373 KEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                V I  +     +         + L   G+   ++  + +  G +   AD    P 
Sbjct: 363 VAPFRVTILNLKQGDAATDAACDQLYRELSAKGVDV-LYDDTDQRAGAKFATADLIGIPW 421

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            I  G    + G +++K  + G   +  + +  +
Sbjct: 422 QIHVGPRGLAEGKVELKRRSDGARENLALADVVA 455


>gi|327402300|ref|YP_004343138.1| Ser-tRNA(Thr) hydrolase [Fluviicola taffensis DSM 16823]
 gi|327317808|gb|AEA42300.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Fluviicola
           taffensis DSM 16823]
          Length = 647

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 42/128 (32%), Gaps = 3/128 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V L+              V I  +          +   
Sbjct: 509 NQKHRPVMIHRAPFGSMERFVAVLLEHCGGDFPLWLATDQVAILPIS--DKYNEYAKDVL 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           ++L  + IR  +    ++  G +++ A+ +  P  ++ G  E     + ++   +G + S
Sbjct: 567 ELLNNSDIRGFVD-DRNEKIGKKIREAELKKIPFMLVVGEKEAEEKQVSVRQRGEGDKGS 625

Query: 458 REIKNNES 465
             I    +
Sbjct: 626 MSIDAFAA 633



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 17/47 (36%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R R+ + ++      G++ + TP +   +      
Sbjct: 262 GLPLWLPKGAALRERLENFLKKAQRKAGYEQVITPHIGNKELYVTSG 308


>gi|28871133|ref|NP_793752.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|81840044|sp|Q87Y24|SYP_PSESM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28854383|gb|AAO57447.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 571

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMNAVGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|168702447|ref|ZP_02734724.1| threonyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 620

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 3/122 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K   +   G    + R++  L  L +    +  + PV +  +       + 
Sbjct: 475 EYKDSDDTPKRPVMIHRGVISTMERMMSYLIELYAGAFPVW-LAPVQVAIVPIADRHFAF 533

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q     L     R ++ LG  +    +++ A  +  P  ++ G  E     + ++ L  
Sbjct: 534 AQKLGDELLDKDYRVDVDLGDKR-MQAKIRDAQLQKIPYILVIGDKEMEANAVAVR-LRD 591

Query: 453 GK 454
           G 
Sbjct: 592 GT 593



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 6/78 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF     K   IR  +   I +     G+  + TP +   +   K     D     +F 
Sbjct: 227 SGFPMLLPKGATIRRLLETFITDYERRAGYLHVFTPDIAKKELY-KISGHWDHYKDSMFP 285

Query: 73  LQD-----DDGQWISLRY 85
             D     +D + + LR 
Sbjct: 286 PMDMGEGGNDDEELCLRP 303


>gi|126463194|ref|YP_001044308.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|221640237|ref|YP_002526499.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|166980147|sp|A3PMH0|SYP_RHOS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782913|sp|B9KLX3|SYP_RHOSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126104858|gb|ABN77536.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|221161018|gb|ACM01998.1| Prolyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 445

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/458 (9%), Positives = 112/458 (24%), Gaps = 63/458 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  RI   +       G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQQAAGIYSWLPLGFKVLKRIEQIVHEEQIRAGHIPLLMPTLQPAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  + D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GEEMLRITDRHKRDMLYGPTNEEMITDIFRSHVSSYKDLP--LTLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  +     ++ +       +  +             R  L  I     
Sbjct: 148 GVMRGREFLMKDGYNFDLDYESAIHAYNRHMVSYL---------RTYERMGLQAI----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                      ++   G    DN+ +F   A+    +       
Sbjct: 194 --------------------------PMRAASGPIGGDNTHEFLVLASTGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D   +  +  + V       +    +   +    ++    +                
Sbjct: 221 VFYDAAITDLKFGDRVVNYDDRAECEAIVKEWTAPYARTDETHDEAVFGQIPEERRRSSR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F     +       +       DG        +       +  + +  +  
Sbjct: 281 GIEVGQIFYFGTKYSEPMGATVVTA------DGSRVPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAE-MFLGSSKNFGNQL 421
                           I  +     S     +   + L   G+  E ++    +  G + 
Sbjct: 335 DKGIIWPEGVTPFHAGIVNLKQGDSSTDLACEALYRDLSARGL--EPLYDDRDERAGAKF 392

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
              D    P  I  G    S G +++ +   G+     
Sbjct: 393 ATMDLIGLPWRITVGPRGISAGKVELTNRRTGESEEMS 430


>gi|254455357|ref|ZP_05068786.1| prolyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082359|gb|EDZ59785.1| prolyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 444

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 55/439 (12%), Positives = 118/439 (26%), Gaps = 66/439 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   +R   +  G   I  P ++ S+   K     D  
Sbjct: 31  MIKQASAGIYSWLPLGFKVMKKIEKIVREEQDKIGAQEILMPTIQSSEI-WKESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  ++D   + +       +    + R   +++ ++      Y I   FR+E     
Sbjct: 90  GEEMLRIKDRQNREMLYGPTNEEQVTEIFRSSLKSYKSLPQL--LYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  + +  S   T +          L  +   +         R  L  I     
Sbjct: 148 GIMRGREFYMKDAYSFDITDEDAFFSYNKFFLSYLRTFK---------RLSLTAI----- 193

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI---DIM 240
                                      +    G    + S +F   A+    +I     +
Sbjct: 194 --------------------------PMAADTGPIGGNLSHEFIILADTGESKIFTDKRI 227

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
               + D E     L ++ K         +E     E  +     +  I     +     
Sbjct: 228 FDLTNDDTELEKSSLEQMRKRYEKFYSVTDEKFNKVEFEKMVSEENRLITKGIEVGHIFY 287

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           +             +   K+  V  GS G G              +              
Sbjct: 288 FGDKYSKAMDTAVDLPGGKKDFVKMGSYGIG-----------VSRLVGAIIEAKYDDENE 336

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            +K       ++      LI  ++ + +S L K       L    I A +   + +N+ +
Sbjct: 337 IMKW----PLSVAPYDIALIPMINKNDNSALEKANKINSELIRNNIEAIID-DTDENYSS 391

Query: 420 QLKYADRRNCPLAIIQGTG 438
           ++K  +    P  II G  
Sbjct: 392 KIKKMNLIGAPYQIIIGKK 410


>gi|94971761|ref|YP_593809.1| threonyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553811|gb|ABF43735.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Candidatus
           Koribacter versatilis Ellin345]
          Length = 659

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 41/120 (34%), Gaps = 19/120 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      L        +L+  GIR E+  G ++    +++    +  P  +
Sbjct: 555 WLSPVQTVLVPIGEKHLEYANKVGDVLKAKGIRVEVD-GRNEKMNAKIREHALQKVPFIL 613

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E     + ++                     +    T+P+   V  ++K++ E K
Sbjct: 614 VVGDKEAEATSVNVR------------------TRGKDKTETVPLDSFVERIEKLIAEKK 655



 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 73/259 (28%), Gaps = 11/259 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  + D +R  Y   G+  + TP +  +D L K         +  F+ 
Sbjct: 276 GLIFWHPKGGIIRKEMEDWMREEYLKRGYSLVVTPHVARTD-LWKISGHTGYYKQNFFTP 334

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D     L+             +        R+YR  P+   E     R+ +      
Sbjct: 335 MELDDAEYMLKPMNCPG-------HVLIYRDQLRSYRDLPMRLGEMGTVYRYERSGVMHG 387

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA +    +   + +    +     ++     +   +      D    + 
Sbjct: 388 LLRVRGFTQDDAHIFCTPSQIEDEISGCIDFAISVLHTYGFNE--FKVELSEWDPNDRKS 445

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGD-FTKGANLTSEQIDIMVSFLSIDLEKSM 252
            I       L +  L+ V    G       G+    G  +  + +D +     +   +  
Sbjct: 446 FIGTDEQWNLAQGSLKKVLDARGIPYKSMPGEAAFYGPKIDVKLVDAIGRLWQLSTVQFD 505

Query: 253 HELYELVKGTIAGEKGFNE 271
             L +  +    GE G   
Sbjct: 506 FTLPQRFELEYVGEDGKRH 524


>gi|89101224|ref|ZP_01174050.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084053|gb|EAR63228.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 408

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/444 (11%), Positives = 121/444 (27%), Gaps = 83/444 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   IR  +   I +  +  G++ + TP++   +   K     D   + +F + + D
Sbjct: 34  WLPKGATIRRIVERYIVDKEQRLGYEHVYTPVMANVELY-KTSGHWDHYQEDMFPVMEMD 92

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + + LR             +         +YR  P+   E     R+            
Sbjct: 93  NEELVLRPMNCP-------HHMMIYKNSIHSYRELPIRIAELGTMHRYEMS--------- 136

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A + +  +   TL    I      I    ++++  ILE       +  + RL   
Sbjct: 137 ----GALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVHLILEVYKDFNIEDYSFRLSYR 192

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D    F    +     E       +      L   + +   +F    L+  +     
Sbjct: 193 DPQDTEKYFNDDEM----WEKAQSMLKEAMDELGLDYYEAEGEAAFYGPKLDVMV---KT 245

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            +           + ++  E    S    +  +    ++      T   + A L      
Sbjct: 246 ALGKEETLSTAQLDFLLP-ERFDLSYVGEDGKQHRPVVIHRGVVSTMERFVAFLIEEYK- 303

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
                         G +   ++  + Q +P +             + L++          
Sbjct: 304 --------------GAFPTWLAPVQVQVIPVSP-DAHFDYAKKVQEELQAQ--------- 339

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
                  +  +  ++ +     +R A                Q++       P  ++ G 
Sbjct: 340 ------GYRVELDARNEKIGYKIREA----------------QMQK-----IPYMLVLGD 372

Query: 438 GERSRGMLQIKDLAKGKELSREIK 461
            E S   + ++    G++ S  + 
Sbjct: 373 KEVSDNAVNVR--KYGEQKSETMS 394


>gi|113475159|ref|YP_721220.1| threonyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110166207|gb|ABG50747.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Trichodesmium
           erythraeum IMS101]
          Length = 608

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 3/129 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              V +  ++  S+     Q   + +   GIR
Sbjct: 481 HRAPFGSLERLIGILIEEYAGDFPVWLAPTQVKLLPVN--SEFWPFAQEVAEQMLQVGIR 538

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE+ + + +  G  ++ A++   P+  + G  E     L I+  + G+  S  +      
Sbjct: 539 AEVDMSNER-LGKLIRNAEKAKIPIMAVVGAKEVESNSLSIRTRSTGELGSIPVMEVIQK 597

Query: 467 REARVAQIT 475
               +A   
Sbjct: 598 MTKAIANYE 606



 Score = 37.1 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   ++N + D ++      G+ P++TP +   D   K      +  + +F
Sbjct: 222 GLPLWTPKGTMLKNSLKDFLQQEQLKRGYLPVDTPHIARIDLF-KTSGHWQKYKEDMF 278


>gi|299533556|ref|ZP_07046932.1| threonyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298718462|gb|EFI59443.1| threonyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 639

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/258 (9%), Positives = 69/258 (26%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R +Y++ G+  ++ P +     L +     D+  + +F+ 
Sbjct: 261 GTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQI-LDKGLWEKTGHWDKYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D + +  +L+            +   +       +         +              
Sbjct: 319 TDSEKREYALKPMNCPGHIIIFKQGIKSYRDLPLRFGEFGNCHRNEPTGSLHGIMRVRAF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     + ++   +      +     D+            IL ++    + ++   
Sbjct: 379 TQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFTN--------ILYRLSTRPEKRIGTD 430

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                A DK +    +G++    E           G  +     D +         +   
Sbjct: 431 E----AWDKAENALAEGLRASGCEFEYLPGEGAFYGPKIEYTLKDALGREWQCGTIQVDP 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 487 NMPERLDAEFVGEDGERH 504


>gi|307150016|ref|YP_003885400.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980244|gb|ADN12125.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 608

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +      L   +     L + GIRAE    S +  G  ++ A+++  P+  
Sbjct: 506 WLAPIQVRLLPVSDPQLDFAKEVAAQLLSQGIRAE-ADTSGERLGKMIRNAEKQKIPVMA 564

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E     L I+  A G+  +  +          +   T
Sbjct: 565 VVGAKEVESNTLSIRTRASGELGTIAVSEVIEKVTEAITNHT 606



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  + + ++      G+ P+ TP L   D   K         + +F +
Sbjct: 222 GLPLWTPKGTIIRTTLEEFLKKEQVKRGYLPVVTPHLARVDLF-KISGHWQNYKEDMFPM 280

Query: 74  QDDDGQW 80
             +D + 
Sbjct: 281 MAEDEES 287


>gi|56459994|ref|YP_155275.1| prolyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81821672|sp|Q5QW31|SYP_IDILO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56179004|gb|AAV81726.1| Prolyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 567

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 49/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R+  ++ + +R   E      I  P+++ +D L +     D  
Sbjct: 31  MIRKVAAGLYTWTPTGLRVLRKVENVVREEMEAINALEILMPMVQPAD-LWQESGRWDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +  ++D + +   L     ++ + L R    ++  +          +R     R   
Sbjct: 90  GPELLRIKDRNQRDFLLGPTHEEIISQLVRKEVSSYKQLPLTLFQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +    +M        E +G
Sbjct: 150 MRAREFLMKDAYSFHLTDESLQKTYDDMYKAYCRIFERLG 189



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/110 (10%), Positives = 32/110 (29%), Gaps = 3/110 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V+I  M+    +      +     L+  GI   +F    +  G  
Sbjct: 458 DERGICWPEALAPFQVVIVPMNMHKSARVQEAAEKLYTDLKAQGIDV-LFDDRKERPGVM 516

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +    P  ++ G        ++ +    G++    + +  S+ + +
Sbjct: 517 FTDMELIGIPHQVVVGERNLDENQVEYQSRKGGEKQKINLDDCISFIQQQ 566


>gi|290957026|ref|YP_003488208.1| prolyl tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260646552|emb|CBG69649.1| prolyl tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 567

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 6/162 (3%)

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGG-RYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                L      E       G       + D L    K   V    + IG+SR + AL  
Sbjct: 400 NCGTGLKLDRAIEIGHIFQLGRKYADALKLDVLGQHGKPVRVTMGSYGIGVSRAVAALAE 459

Query: 365 L---ESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
               +       E+ P  +  +       ++     ++ LR AG+R  +   +  + G +
Sbjct: 460 QSADDKGLCWPAEVAPADVHVVAAGKALQTELALDVSEKLRAAGLRVLVDDRAGVSPGVK 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              ++    P  ++ G    + G+L++KD   G+     +  
Sbjct: 520 FTDSELIGVPKILVAGRRS-AEGVLELKDRRTGEREELTVDE 560



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++   +   +R   +  G   +  P L   +         D     +F L+D  
Sbjct: 48  WLPLGKKVLANVERIVREEMDAIGAQEVLLPALLPKEPYEA-TGRWDEYGPELFRLKDRK 106

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 107 GGDYLLGP 114


>gi|299823039|ref|ZP_07054925.1| proline--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816568|gb|EFI83806.1| proline--tRNA ligase [Listeria grayi DSM 20601]
          Length = 566

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 22/76 (28%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G              I   IR      G   I  P L+ ++ L +           
Sbjct: 34  QTASGVYSYLPLATLTLRNIERIIREELNKVGASEILMPALQPAE-LWEESGRWADYGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +  L+D + +  +L  
Sbjct: 93  LMRLKDRNNRDFALGP 108



 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 9/163 (5%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT-GFSIGISRLIVALKSLE 366
           E ++ F    E       G+          +      N      + IG+SR++ A+    
Sbjct: 397 EGVIRFAEGIEVGHIFKLGTKYSDAMKANFLDENGRANPIIMGCYGIGVSRVLSAIAEQN 456

Query: 367 S------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           +          I      LI     + +  S  +     L+ +G        + +  G +
Sbjct: 457 ADENGLVWDREISPFDLHLIPVNMKNEEQASFAEELYVSLQESGFTVLFDDRAERA-GVK 515

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              AD    P+ I  G      G++++K    G+ +  + +  
Sbjct: 516 FADADLIGLPIRITVGKK-ADEGIVEVKIRKTGEMIEVKKEEL 557


>gi|169621698|ref|XP_001804259.1| hypothetical protein SNOG_14060 [Phaeosphaeria nodorum SN15]
 gi|160704311|gb|EAT78685.2| hypothetical protein SNOG_14060 [Phaeosphaeria nodorum SN15]
          Length = 568

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 14/114 (12%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
            +      SK +  ++ L  AG+R E       + G +    + +  PL I  G  +  +
Sbjct: 361 AEDKESLYSKVKKISEDLVEAGVRVETDYREGYSPGWKFNDWELKGIPLRIEFGPKDAEK 420

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           G++                +     +   A+ TI + +L   V K+L++ ++++
Sbjct: 421 GVVT--------------TSRRDISDKDAARGTINVDDLTKEVPKLLEKIQKDM 460


>gi|331701570|ref|YP_004398529.1| threonyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128913|gb|AEB73466.1| threonyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 648

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 57/209 (27%), Gaps = 16/209 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G+  + TP+L   D   K     D   + +F  
Sbjct: 263 GLPYWMPNGATIRRTIERYIVDKEVANGYQHVYTPVLANLDLY-KQSGHWDHYREDMFPP 321

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 322 MDMGDGEELELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 381

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +     +  +M +      I    + +   + K  +         
Sbjct: 382 MTLNDGHTFVALDQIQEEFKNILNLMVEVYHDFDINDYTFRLSYRDPKNTEKYF------ 435

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLL 214
            DD              +D+ GL  V+  
Sbjct: 436 -DDDEMWTRAQTMLKGAMDEMGLDYVEAE 463



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 39/131 (29%), Gaps = 3/131 (2%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G    + R +  L  +             +          L   +     LR   IR+ +
Sbjct: 520 GLVSTMERFVAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHLDYAKKINDQLRALKIRSSV 579

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               ++  G  ++ A     P  ++ G  E S   + ++    G++ ++     +   E 
Sbjct: 580 D-TRAEKMGYLIRDAQTHKIPYTLVVGDEEVSGNSVSVR--KYGEQDTQSESVPDFIDEV 636

Query: 470 RVAQITIPISE 480
                +    E
Sbjct: 637 SKDIASYSREE 647


>gi|297623866|ref|YP_003705300.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165046|gb|ADI14757.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 665

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 41/123 (33%), Gaps = 3/123 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                S     +   L+              V +  +    ++ ++       L  AG+R
Sbjct: 526 HRAPLSTHERLVGFLLEHFAGDFPLWLAPEQVRVVPIADRHNAYAQSLK--ARLAEAGLR 583

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE  L   +    +++ A+    P  +I G  E   G L  +   + ++    ++   + 
Sbjct: 584 AEADLRGER-MNAKVRDAELLKVPYTVIVGDKEVEAGALSFRSRKEPEQKGVSVEAFVAH 642

Query: 467 REA 469
            +A
Sbjct: 643 LQA 645



 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 13/47 (27%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      +   I   I    + +    G+  + TP +       +  
Sbjct: 271 GLPLWLPRGAVIVEEIEKLAKEMERRAGYQQVRTPHVTKEQLFTRSG 317


>gi|294632148|ref|ZP_06710708.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292835481|gb|EFF93830.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 442

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R+ + + IR+     G+  + +P+L   +   +     D  +  +F  
Sbjct: 57  GLPYWLPDGATVRHTLEEYIRDAERRAGYRHVYSPVLGKRELY-EISGHWDHYSDDMFPP 115

Query: 74  QDDDGQWISLRYDLTA 89
            D  G+ + LR  L  
Sbjct: 116 MDLGGEQVVLRPSLCP 131



 Score = 41.0 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +   +  L + +   +     G+RAE+        G +++ A R   P   
Sbjct: 334 WLAPVQLVVLPVSAAELPQAEALARRCTDLGLRAEIAAPERGTLGARIR-ASRL-VPYQA 391

Query: 434 IQGTGERSRGMLQIKDLAKG 453
           + G  E +   + ++ L  G
Sbjct: 392 VIGAKEATDDHVSLR-LRDG 410


>gi|260757796|ref|ZP_05870144.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260668114|gb|EEX55054.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
          Length = 210

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N++   IR      G + I  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPIGLKVLNKVCTIIREEQNRAGANEILMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
           QD   + +       ++   + R    ++  +       +                  F 
Sbjct: 97  QDRQKREMLFGPTNEEMVTDIFRSYVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFL 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
                  D     A+ A   M +    T   VG++     
Sbjct: 157 MKDAYSFDLDYEGAKMAYYRMFVSYLRTFARVGLQAIPMR 196


>gi|229115852|ref|ZP_04245250.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228667595|gb|EEL23039.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 640

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 67/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  ++  +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMGQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDVKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYANEVADKLAQAGVRIER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   +  G +++ A  +  P  ++ G  E   G + ++    G+E S  + 
Sbjct: 575 DV-RDEKLGYKIREAQMQKIPYVLVIGDKEMENGSVNVR--KYGEEKSEVVA 623



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 42/161 (26%), Gaps = 9/161 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
                +    DA + +      + +                
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMGQIDYVYKTFGF 416


>gi|148654295|ref|YP_001274500.1| threonyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148566405|gb|ABQ88550.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Roseiflexus sp.
           RS-1]
          Length = 595

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/360 (10%), Positives = 88/360 (24%), Gaps = 9/360 (2%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---DTLE 156
                      +   +  E      ++      +       ++   E            +
Sbjct: 218 LFTPKGEMLRHLMESYVREVQTRYGYQHVWTGHIVREALYKKSGHYEAYRENMFPPMVED 277

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
              I R       ++  +   +          +  E   + R  D+    GL  V+ L  
Sbjct: 278 EEHIYRLKPMNCPSHMTLYKEMGIHSYRDLPLRFAEFATLYRYEDRGTLTGLTRVRALTQ 337

Query: 217 EGR--TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
           +            +   L    I  ++        +    L       I  ++ ++    
Sbjct: 338 DDCHIFCRPDQIEEEFGLALRLIREVLETYRFTDYRVRLSLRGAGGKYITDDEAWDLAEH 397

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
                    +     + +             +   +LG        +         G  Y
Sbjct: 398 ALR--TALDHYGVEYEEAPGEAAIYGPKADFLARDVLGREWQLSTIQVDFIQPRRLGLEY 455

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                + +   V     +    R +  L    +    +       I     D    +   
Sbjct: 456 IAEDGQPRTPVVLHRAVTGSTERFLGVLIEHYAGAFPLWLAPVQAIVIPISDERHSAYAA 515

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + L  A +R E+ L   +    +++ A  +  P  +I G  E+  G + ++    G+
Sbjct: 516 EVGRQLTAAQLRVEVDLSKDR-MQAKIRQAQLQKIPYMLIIGDREQRAGAVAVRT-RSGE 573


>gi|82523876|emb|CAI78599.1| threonyl-tRNA synthetase [uncultured delta proteobacterium]
          Length = 631

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 4/98 (4%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +  +  V++T  D   +     Q   Q L  A IR EM +  ++  G +++ A 
Sbjct: 526 GAFPVWLSPVQAVILTVTDRVDE---YAQNLYQELIDADIRVEMDI-RNEKLGLKVREAQ 581

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +  P  +I G  E S   + ++     K+    I++ 
Sbjct: 582 LQKIPYMLIIGDKEVSEKRVTLRCRDDKKQSELNIEDF 619


>gi|46108902|ref|XP_381509.1| hypothetical protein FG01333.1 [Gibberella zeae PH-1]
          Length = 548

 Score = 58.7 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 64/546 (11%), Positives = 137/546 (25%), Gaps = 93/546 (17%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R++++I   I     + G   +    +  S+ L +     D     +F L+D  
Sbjct: 23  LLPLGLRVQDKIEKLIDKHMHSVGASRLSLSTI-SSEELWRRSNRLDSVAPELFRLKDRK 81

Query: 78  GQWISLRY----DLT---APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
              + L      ++T   A +     +    +    R YR     R+       F     
Sbjct: 82  DTPLILSPTHEEEITTLVAGIVNSYKDLPIRLYQITRKYRDERRPRHGLLRSREFLMKDL 141

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAV-----------GIKRNDYHIGINNRKILDGIL 179
              D   S A     ++          +           G    D     +    +    
Sbjct: 142 YTFDLTTSEAVETYRQVSGAYRAFFAELKLPYLIAEASSGDMGGDLSHEYHLPSAVGEDS 201

Query: 180 EKIGLHGDDKLNERLIVLR------------AIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
                  D   N+ +   R            A       G+   + +L           +
Sbjct: 202 VVSCDSCDYTANDEVATARTPLPTDSAATVPASQFRVWRGISKDRKILVNAWYPQPSGGS 261

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG-------------TIAGEKGFNELVV 274
             +  +   +  +V  L   +E  +    E ++                + E   NEL +
Sbjct: 262 PDSGPSLHAVKSVVPELDTTIENPLPLWGEALESGDVQMINVIDGNLASSFESVRNELPL 321

Query: 275 ISELVRKSGYNSNRIKISST----------------IVRGLEYYTGCVYEAILGFPVMNE 318
           ++E ++     S+ I  S T                             E    F +   
Sbjct: 322 LTEPLKSYEVRSSSIVGSDTGAGLNLVPISDGDGCPRCDKGTLKIHKALECGHTFQLGTR 381

Query: 319 KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI--------SRLIVALKSLESSTN 370
              P+                             +G            +  + + E   N
Sbjct: 382 YSVPLDACVDLPRSGLPEAAVEEGLTPGSRVPVQMGCHGVGVSRIFGAVAEILADERGLN 441

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-----GIRAEMFLGSSKNFGNQLKYAD 425
             + + P  +T +  +     +       L        G    +     ++FG ++K AD
Sbjct: 442 WPRAIAPFEVTIIPSNG-LADEPLDIYDTLSKNNGSQSGFDVVLD-DRKRSFGWKMKDAD 499

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
               P+ +I G   +  G  ++                         +  + + EL   +
Sbjct: 500 MVGYPVLVILGKSFKENGTCEV------------------QCRRLSVKDNVKVDELPEFI 541

Query: 486 KKILQE 491
             +L +
Sbjct: 542 SSLLDK 547


>gi|206900242|ref|YP_002250841.1| histidyl-tRNA synthetase, putative [Dictyoglomus thermophilum
           H-6-12]
 gi|206739345|gb|ACI18403.1| histidyl-tRNA synthetase, putative [Dictyoglomus thermophilum
           H-6-12]
          Length = 318

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 133/389 (34%), Gaps = 72/389 (18%)

Query: 25  IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            R  +   IR   E +G++ +  P+L Y D  G          K +   +  +G++++LR
Sbjct: 2   KRENLEKVIRRKLELWGYNEVRIPIL-YEDIWG---------EKNLIYFE-KNGKFLALR 50

Query: 85  YDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
            ++T    R + ++      P R + +GP+F+             Q   + V   +   D
Sbjct: 51  PEIT----REILKSIRYEKTPKRMFYMGPIFKLNGGQVEE---NYQIGWELVYRPSIWRD 103

Query: 145 AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
            E+ +++ +  + +     DY I + N +I + I                          
Sbjct: 104 LEVLLIIKEIFDELN--IEDYIIELGNTRIWEPI-----------------------WKL 138

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA 264
               + +K+L G     +   F +   +TSE  + +++ L  D   +             
Sbjct: 139 IEDKERIKVLKGYLIKRDYVSFLENLEITSEIRNEVINLLYYDSSINF--------VNPL 190

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
            E+G   L+   E + K G+  + I ++  ++R  EYY G ++E  L     N K     
Sbjct: 191 IEEGLKLLLSFIENLIKLGFKESNIVMNPALMRPYEYYDGIIFEVYL----KNAKLALGG 246

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
            GS     +Y+                 +        ++       N           M 
Sbjct: 247 GGSYIEKNKYN----------------ELLYGFGFAFVEENLLGLVNKNMPEESAKYFMG 290

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
            D D +  Y+   +  R  GI +     +
Sbjct: 291 FDDDFIRIYEDMKRE-REKGIVSIFIPNN 318


>gi|303229391|ref|ZP_07316181.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515927|gb|EFL57879.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 636

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++ ++ +D I TP++     L +     D   + +++ 
Sbjct: 263 GFPFFLPKGMALRNELENFWREVHHDFEYDEIRTPIILNKH-LWETSGHWDHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              D +  +++          V +N            
Sbjct: 322 II-DDEEYAIKPMNCPGGI-LVYQNEMHSYRDLPLRY 356



 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 40/120 (33%), Gaps = 19/120 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +      +       + +R   +R E+    ++  G +++ A     P  +
Sbjct: 536 WMAPVQVKVLPISEKHVEYANQLAKQMRHDYVRVEVD-DRNEKIGYKIRQAQMEKVPYML 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E     + ++                  +       T+P  E  +++K  ++E  
Sbjct: 595 VVGDKEMEDNSVNVR------------------KHGGDELGTVPFDEFFNSIKIEIKERN 636


>gi|311113213|ref|YP_003984435.1| proline--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944707|gb|ADP41001.1| proline--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 605

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 1/109 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V I   + D+ S    +  +  L  AG++  +      + G +  
Sbjct: 496 DEKGLIWPRNLAPADVHIVITNKDAQSHEYAETLSAELEGAGVQVLLDDRLKTSPGVKFG 555

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            A+    P  ++ G      G L++KD   G+     + +      A +
Sbjct: 556 DAELLGVPTILVIG-RGFKDGTLELKDRRNGEARDIAVSDAVREILAEI 603



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  ++ + +R      G   +  P L   E  ++  ++    D     +
Sbjct: 40  GVYTWLPLGLKVLRKVENIVREEMNAIGAQEVLFPALLPREPYEATNRWEEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G  + L  
Sbjct: 96  FRLQDRKGADMLLAP 110


>gi|225374732|ref|ZP_03751953.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM
           16841]
 gi|225213424|gb|EEG95778.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM
           16841]
          Length = 594

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/363 (11%), Positives = 99/363 (27%), Gaps = 25/363 (6%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M +     +       +   I  N       +  +IG    D   
Sbjct: 249 TSGHWDHYKDNMFPAMEVEGESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGEIAHDFRF 308

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L+ I++   F      L +   + ++           + +   +  +  +   + 
Sbjct: 309 EASGTLKGIERGRHFCQNDAHLFVTPEQIESEFSQVVDLIFDTYKDFNITDYRCVLSLRD 368

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +  +            N L  + + +      +  I  ++     L+        AI 
Sbjct: 369 PADKVKYHDDDEMWNTAENALRKVLDDL--GIDYTEEIGEAAFYGPKLDVNVKP---AIG 423

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               ++  Q              D   ++     +           +   L+  + +   
Sbjct: 424 NEYTLSTCQLDFCLPEKFNLTYIDKDGTKKTPVVLHRAILGSLDRFMAYILEETKGNLPL 483

Query: 372 IKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                   I  + + D +  +        L   GIR E+    ++  G +++ A     P
Sbjct: 484 WLAPVQARIIPVKNEDEELNAYSHELLSYLDENGIRVEID-ERAEKLGYRVRAAQVEKVP 542

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
             II G  E   G +  +    G++ +                 T+P  E ++ +K  + 
Sbjct: 543 YLIILGKNEVKDGTVSYR--LHGEQAT----------------TTVPKEEFLAMLKDEIA 584

Query: 491 ENK 493
             K
Sbjct: 585 TKK 587



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 65/258 (25%), Gaps = 9/258 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   +   + + I+      G+  + TP +   +   K     D     +F 
Sbjct: 204 RGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTPCVGTVNLY-KTSGHWDHYKDNMFP 262

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR             +         +Y+  P+   E     RF       
Sbjct: 263 AMEVEGESFVLRPMNCP-------HHMMIYANRMHSYKDLPIRIGEIAHDFRFEASGTL- 314

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                      +     +  + +E+   +  D          +      + L       +
Sbjct: 315 KGIERGRHFCQNDAHLFVTPEQIESEFSQVVDLIFDTYKDFNITDYRCVLSLRDPADKVK 374

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   +  +    + +  L  +   +       G  L       + +  ++   +  
Sbjct: 375 YHDDDEMWNTAENALRKVLDDLGIDYTEEIGEAAFYGPKLDVNVKPAIGNEYTLSTCQLD 434

Query: 253 HELYELVKGTIAGEKGFN 270
             L E    T   + G  
Sbjct: 435 FCLPEKFNLTYIDKDGTK 452


>gi|167624874|ref|YP_001675168.1| prolyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083514|sp|B0TNJ5|SYP_SHEHH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167354896|gb|ABZ77509.1| prolyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 570

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 33/109 (30%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  +I   +R      G   I  P+++ +D L       ++ 
Sbjct: 31  MIRRNASGLYSWLPTGLRVLRKIEAIVREEMNKAGSVEILMPMVQPAD-LWVETGRFEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +   QD   +   L     ++   + R    ++  +       +  
Sbjct: 90  GPELLRFQDRHNRDFVLGPTHEEVITDIVRKEVNSYKQLPLNLYQIQTK 138



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       K   +   Q L  AGI         +  G  
Sbjct: 460 DDRGIIWPDAIAPFTVGILPMNMHKSHRVKDIAEQLYQDLNDAGIEVMFDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      GM + K+   G++    + +   + +A+ A
Sbjct: 519 FADMELIGIPHVVVIGDRNIDNGMFEYKNRRTGEKQDIPLGDIVEFLKAQHA 570


>gi|16081463|ref|NP_393810.1| threonyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|22654139|sp|Q9HL99|SYT_THEAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|10639503|emb|CAC11475.1| threonine--tRNA ligase related protein [Thermoplasma acidophilum]
          Length = 660

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/466 (9%), Positives = 119/466 (25%), Gaps = 51/466 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF         IR  +L  + ++    G+  + TP + + D++ K      +    ++  
Sbjct: 245 GFPLYTQYGQTIRKELLSYMDSMNRKNGWFDVWTPHV-FRDTIWKQSGHYAKYRPNMYLF 303

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              DG    ++          +                 P          +  +      
Sbjct: 304 TLPDGDSYGIKPMNCPGHI-AIFSRRKYSYRDLPVRYSEPGTVYR---YEKSGEVGGLTR 359

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +  +         + D +  +     D    +     L        L   D+ +  
Sbjct: 360 PRAFTQDDGHAFLRMDQIGDEIRTLLTMVKDVFTILFGNIEL-----SFDLSVIDRDHPE 414

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
             ++  + +   + ++G +    E    +S D     ++     + +   L     +   
Sbjct: 415 NYLVSYVCRNCGYRIEGARGTDIECPVCHSHDLEPDLSVWDNATEQLRDALKSMGIEYKE 474

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
              E                               + +   I R  +  T          
Sbjct: 475 YPGEA----------------------AFYGPKIDVHVKDAIGRMWQLST---------- 502

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  +   PV FG               +   +    +      + + L+          
Sbjct: 503 -IQLDFFMPVNFGLTYTNSE----GKEDRVVMIHRAIYGSYERVMAILLEHYAGKLPTWL 557

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +  +  + D     +   + L   GIR+E+   S +    ++K          I
Sbjct: 558 TPIQTYVVPISSNFD--EYARHVHEELIRHGIRSEID-TSQETVSKKIKLIHPYRPAYII 614

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           + G+ E     +  ++  +GK  +  +       +  + Q  +  +
Sbjct: 615 VVGSKEMETNSVTARN-REGKSKTYSLSEFIDVVKKEIEQRKVDQA 659


>gi|294790672|ref|ZP_06755830.1| proline--tRNA ligase [Scardovia inopinata F0304]
 gi|294458569|gb|EFG26922.1| proline--tRNA ligase [Scardovia inopinata F0304]
          Length = 598

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 32/111 (28%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +     D  +          L   GI          + G + K
Sbjct: 486 DDKGLIWPAAIAPAQVHLVATGKDDRAFHIADDLLHQLEGEGIEVLYDDRLKVSPGVKFK 545

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            ++    PL ++ G    + G ++I++   G+     ++      +  V Q
Sbjct: 546 DSELLGMPLVLVVGRDAVNNGTVEIRNRRSGQVQIVPLEQAFHTVKETVGQ 596



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ N+I   IR      G   +  P +   +         +     +F  
Sbjct: 43  GLYSWLPLGLRVLNKIEAIIREEINAIGAQEVHFPAMMPREPYQMSN-RWEEYGDNIFRF 101

Query: 74  QDDDGQWISLRY 85
           +D  G    L  
Sbjct: 102 KDRHGADYLLAP 113


>gi|150389418|ref|YP_001319467.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949280|gb|ABR47808.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 636

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN + +  R  +   G++ I+TP++  ++ L K     D   + ++  
Sbjct: 263 GFPFFHPNGMIVRNELENFWRREHTKRGYEEIKTPII-LNEQLWKQSGHWDHYQENMY-F 320

Query: 74  QDDDGQWISLRYDLTAP 90
            + D    +++      
Sbjct: 321 TNIDDANYAVKPMNCPG 337



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    + L   +   Q +    IR  +    S+  G +++ A     P  +
Sbjct: 536 WLAPVQAKILPITDNHLEYARKLQQQMLEKDIRVVID-ERSEKIGFKIREARLERVPYML 594

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E     + ++   +G+
Sbjct: 595 VIGDKEVESETVAVRAREEGE 615


>gi|296133381|ref|YP_003640628.1| threonyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031959|gb|ADG82727.1| threonyl-tRNA synthetase [Thermincola potens JR]
          Length = 637

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  +E  G+  I TP++  + SL +     D   + ++  
Sbjct: 263 GFPFFHPKGMIVRNELEKFWREQHEKAGYQEIRTPII-LNRSLWEQSGHWDHYRENMY-F 320

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 321 TKIDDIDFAVKPMNCPG 337



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M     S    +     L+  G+R E+    ++  G +++ A     P  +
Sbjct: 536 WLSPVQAKIMTVTDRSKQYAEKVADWLKEKGVRVEVD-ARNEKIGYKIREAQVEKVPYML 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G  E   G + ++   +G + +    +  +     + + 
Sbjct: 595 VVGDKEMENGTVAVRKRGEGDKGAVNADDFVALITKEIKEK 635


>gi|116252274|ref|YP_768112.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123261550|sp|Q1MGA7|SYT_RHIL3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115256922|emb|CAK08016.1| putative threonyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 661

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 77/253 (30%), Gaps = 11/253 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV-----I 275
           D++  F     + +E + I    LS+  +    E+   +        G +EL       +
Sbjct: 389 DDAHIFCTDEQMAAECLKINDLILSVYKDFGFDEVTIKLSTRPDKRVGSDELWDRAESVM 448

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             ++      SN IK       G  Y     +E  L   +  E Q            R+ 
Sbjct: 449 MGVLETIQQQSNNIKTGILPGEGAFYG--PKFEYTLKDAIGREWQCGTTQVDFNLPERFG 506

Query: 336 GLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                   +            G     + +     + +    + P+ +      S++ + 
Sbjct: 507 AFYIDSNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATITSEADAY 566

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + LR AG+  E     ++    +++       P+ I+ G  E     + I+ L  
Sbjct: 567 GLEVAEALREAGLNVETDF-RNEKINYKIREHSVTKVPVIIVCGRKEAEERTVNIRRLGS 625

Query: 453 GKELSREIKNNES 465
             ++S  +     
Sbjct: 626 QDQVSMGLDAAVE 638


>gi|303230749|ref|ZP_07317496.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514509|gb|EFL56504.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 636

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++ ++ +D I TP++     L +     D   + +++ 
Sbjct: 263 GFPFFLPKGMALRNELENFWREVHHDFEYDEIRTPIILNKH-LWETSGHWDHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              D +  +++          V +N            
Sbjct: 322 II-DDEEYAIKPMNCPGGI-LVYQNEMHSYRDLPLRY 356



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 40/120 (33%), Gaps = 19/120 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +      +       + +R   +R E+    ++  G +++ A     P  +
Sbjct: 536 WMAPVQVKVLPISEKHVKYANQLAKQMRHDYVRVEVD-DRNEKIGYKIRQAQMEKVPYML 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E     + ++                  +       T+P  E  +++K  ++E  
Sbjct: 595 VVGDKEMEDNSVNVR------------------KHGGDELGTVPFDEFFNSIKIEIKERN 636


>gi|256545377|ref|ZP_05472740.1| proline--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398938|gb|EEU12552.1| proline--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 565

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +++ N+I + +R   E Y    + T +L+  D   K           +F 
Sbjct: 30  SGVYSYLPLGMKVINKIENIVRKSMEKYDSIEVSTSVLQSKDIWEKS-GRWQNFGPEMFK 88

Query: 73  LQDDDGQWISLRY 85
           ++D   +   L  
Sbjct: 89  IKDRHDREFCLGP 101


>gi|262197045|ref|YP_003268254.1| prolyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262080392|gb|ACY16361.1| prolyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 584

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 74/273 (27%), Gaps = 15/273 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G         R+  +I + +R   +  G   +  P     + L +  
Sbjct: 26  MVRGGYMR-RLAAGVYTFLPLGWRVIRKIENIVREEMDAAGAQEVLMPAAIPGE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
               +    +   QD  G          ++   + R       E   T+      +R   
Sbjct: 84  GRWSKYGPELLRFQDRKGADFCFGPTHEEVVVDMVRRDTKSYRELPLTLYQIQSKFRDEL 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
             R        F        D    +A  +   M           G+   D+     +  
Sbjct: 144 RPRAGLMRGREFIMKDAYSFDVSEEAAMHSYTGMYQAYERIFRRCGL---DFRPVEADTG 200

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE---GRTDNSGDFTKGA 230
            + G          +   + ++   A +         V          + +     +K A
Sbjct: 201 AIGGSRSHEFQVLAESGEDAIVSCDACEYAANVEEAKVPAPSEPGIVHQGEGEATLSKVA 260

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTI 263
              ++ I+ +  FL ++ E+ +  L  +     
Sbjct: 261 TPGTKTIEQVTKFLGVEAEQVIKTLVYMADDKP 293



 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 19/112 (16%)

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D D  +  +     L+  GI   +   + +  G + K AD    PL +  G      G 
Sbjct: 487 KDEDVAAAGETLYAKLKECGIEVLLDDRAER-PGAKFKDADLIGIPLRVAIGKRSLDDGK 545

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           +++K                 WR+   A++ +P+++ V  V  +++  +E +
Sbjct: 546 VEVK-----------------WRKGGDAEL-VPVADAVEHVAGLIRAERERL 579


>gi|192291648|ref|YP_001992253.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|226701325|sp|B3Q7L2|SYP_RHOPT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|192285397|gb|ACF01778.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 438

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/454 (11%), Positives = 112/454 (24%), Gaps = 58/454 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R      G   +  P L+ +D L +     D         
Sbjct: 38  GIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLAD-LWRESGRYDAYG------ 90

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                       ++     R    +                          + +  +   
Sbjct: 91  -----------PEM----LRIADRHKRE------LLYGPTNEEMITEIFRAYIKSYKSLP 129

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            N+         E             + ++ Y   ++         +    +        
Sbjct: 130 LNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFARMG 189

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  +             ++   G    D S +F   A      + I    L++ +     
Sbjct: 190 LKAI------------PMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVP---D 234

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRGLEYYTGCVYEAILG 312
           E  +         K +  +   +E V +     + +  ++    RG+E      +     
Sbjct: 235 ENVDYDGDLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYS 294

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
             +      P    +   GG Y   VSR  G  + A                        
Sbjct: 295 DSMKANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACH------------DDNGIIWPEA 342

Query: 373 KEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                V I  +     +         + L   G+   ++  + +  G +   AD    P 
Sbjct: 343 VAPFRVTILNLKQGDAATDAACDQLYRELSAKGVDV-LYDDTDQRAGAKFATADLIGIPW 401

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            I  G    + G +++K  + G   +  + +  +
Sbjct: 402 QIHVGPRGLAEGKVELKRRSDGSRENLALADVVA 435


>gi|312884352|ref|ZP_07744060.1| prolyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367982|gb|EFP95526.1| prolyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 571

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/169 (10%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPSGLRVLRKVENIVRQEINNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GAELLRLNDRHDRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D +      + +     +  D        
Sbjct: 146 RFGVMRSREFSMMDAYSFDIDKDGLQKSYEAMHQAYCRAFDRMGLNYRP 194



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGE 439
             M    +     +   + L   G   E+     K   G      +    P  ++ G   
Sbjct: 481 MNMHKSEEVQQAAENLYRELTDLG--VEVLFDDRKERPGVMFSDMELIGIPHTVVIGDRS 538

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              G  + K+   G++ +  + +     + ++A
Sbjct: 539 MKEGNFEYKNRRTGEKEAIAMADILGHLKNQLA 571


>gi|300857280|ref|YP_003782264.1| glycyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437395|gb|ADK17162.1| glycyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 463

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/228 (7%), Positives = 57/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     +       E +   +  ++   + +        +    +        
Sbjct: 238 EWHDYWKKYCWNFLLSLGIKEENIRFRDHDKEELSHYSNATSDIEYLFPFGWGELWGVAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   ++      +       +  +      +V A    +         + LE   
Sbjct: 298 RTDYDLKQHQEHSGKDMTYLDTVTKEKYIPYCIEPSVGADRAVLAFLVDAYDEEELEGGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        K      +LR      E     + + G + +  
Sbjct: 358 VRTVLHFHPAIAPFKAAILPLSKKLSEKALEVYNILRK-DFNVE--YDDAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  I           + ++D    ++   +I+   ++ + +V 
Sbjct: 415 DEIGTPYCITVDFDTMDDNTVTVRDRDTMEQFRIKIEELSAFIQEKVQ 462


>gi|229543582|ref|ZP_04432642.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328002|gb|EEN93677.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 640

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/365 (10%), Positives = 96/365 (26%), Gaps = 35/365 (9%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M   + +       +   +  N       +  +I   G     
Sbjct: 306 TSGHWDHYQEDMFPVMKMDNEELVLRPMNCPHHMMVYKNTIHSYRELPIRIAELGLMHRY 365

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L  + ++    L    + +   +            L   +   +  +      + 
Sbjct: 366 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVELILEVYKDFNITDYSFRLSYRD 425

Query: 252 MHELYELVKGTIAGEKGFNELVVI-----SELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                +         K    L         +     G  +         VR        +
Sbjct: 426 PENTDKYYDDDEMWNKAQAMLKETMDDFGFDYYEAEGEAAFYGPKLDVQVRTALGKDETL 485

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
               L F +        V          DG   R    +            +   ++  +
Sbjct: 486 STVQLDFLLPERFDLTYVGE--------DGKPHRPVVIHRGVVSTM--ERFVAYLIEEYK 535

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +         V +  +  D+      +   + L+  G+RAE+     +  G +++ A  
Sbjct: 536 GAFPTWLAPIQVQVIPVSPDA-HYDYARKVQEALKAEGVRAELD-ARDEKLGYRIREAQV 593

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           +  P A+I G  E +   + ++    G++ +                 T+P+   +S +K
Sbjct: 594 QKIPYALIVGDQEATDNAVNVR--KYGEKQT----------------ETVPVDTFLSKIK 635

Query: 487 KILQE 491
           + ++ 
Sbjct: 636 EEIKR 640



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 36/114 (31%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+D + TP+L   D   K     D   + +F +
Sbjct: 262 GLPLWLPKGATIRRTIERYIVDKEVKLGYDHVYTPVLGSVDLY-KTSGHWDHYQEDMFPV 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              D + + LR             +         +YR  P+   E     R+  
Sbjct: 321 MKMDNEELVLRPMNCP-------HHMMVYKNTIHSYRELPIRIAELGLMHRYEM 367


>gi|225181661|ref|ZP_03735101.1| threonyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167642|gb|EEG76453.1| threonyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 636

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 1/94 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +          Q   +  R AG+RAE  +  ++  G +++ A  +  P  ++ G  
Sbjct: 540 QVVVLPITDKHHQYAQTLVERFREAGVRAEADV-RNEKIGYKIREAQVQKVPYMLVVGDK 598

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           E   G + +++ A G   S E+    +   A +A
Sbjct: 599 EMEAGQVSVRERAAGDVGSMEVDAFLAKITAEIA 632



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 2/91 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     + + IRN + +  R  +   G+D I+TP++  +  L +     D   + ++  
Sbjct: 262 GFPLLHPRGMIIRNALEEFWREEHRKAGYDEIKTPII-LNRVLWERSGHWDHYQENMY-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
              D Q  S++                +   
Sbjct: 320 TKIDEQDFSVKPMNCPGSMLVYKTKMHSYRD 350


>gi|222479210|ref|YP_002565447.1| prolyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|259511600|sp|B9LUM0|SYP_HALLT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222452112|gb|ACM56377.1| prolyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 491

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 59/219 (26%), Gaps = 8/219 (3%)

Query: 264 AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPV 323
           A E+    L   + +                  +     T    EA++      +     
Sbjct: 178 AWEETMTRLDQYASVYEDLLAMPVLKGQKPDHDKFPGAETTTTVEALMPDGKSVQAGTSH 237

Query: 324 VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPV 378
             G               + + +  T       R + AL                    V
Sbjct: 238 HLGQSFAEAFDITFSDEDEEERIAHTTSWGLSWRALGALIMTHSDEQGLVLPPGVAPEQV 297

Query: 379 LITTM---DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
           ++  +   D   + L   +     L  AGIR E+     +N G +    +    PL I  
Sbjct: 298 VVVPIWQEDTKDEVLEYAEGVADDLDDAGIRVELDDRDGRNPGFKFNEHELNGVPLRIEI 357

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           G  E   G L +     G+ +  + +   +  +    ++
Sbjct: 358 GPHEVEDGELTLVHRPDGESVVEDREGVVATVQDHFDEV 396


>gi|289432262|ref|YP_003462135.1| prolyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288945982|gb|ADC73679.1| prolyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 569

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 83/290 (28%), Gaps = 17/290 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           + A+L  G         R   +I + IR      G   +  P+L+  +   +    E   
Sbjct: 31  MIAQLTAGVYSFMPLAWRSIQKIENIIRQEMNKAGCQELAMPVLQPVEIWQQS-GREAPF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEK 119
            + +F L+D     + L     ++   LA    +++  +       +      P  R   
Sbjct: 90  GQTLFHLKDRKDHNLVLGPTHEEVITDLASRYIQSYRDLPQRLYQIQAKFRDEPRPRGGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN--DYHIGINNRKILDG 177
                F        D      + +   M           G++    D   G    K    
Sbjct: 150 IRVREFIMKDMYSFDASPEGLDDSYQTMKQAYESVYRRCGLESMVIDADSGAIGGKASHE 209

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            +       D  +        A  +   F  + +     +       D  + A    + I
Sbjct: 210 FMIVAESGEDSIIYCPKCSYAANAEKAVFKKKTLPKETLK-------DLEEVATPGQKAI 262

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
             +  FL++  E ++  ++ +  G         +L +    ++     ++
Sbjct: 263 SDVARFLAVKPENTLKAVFYMADGKFVMAVIRGDLDINEVKLKNLLKCND 312


>gi|126651397|ref|ZP_01723604.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591926|gb|EAZ86009.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 643

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/383 (11%), Positives = 101/383 (26%), Gaps = 20/383 (5%)

Query: 92  ARYVAENF---DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            R V E +     +    +      +   E +         Q  +               
Sbjct: 276 IRRVIERYIVDKELSLGYKHVYTPVLGSKELYQTSGHWDHYQDSIFPPMEMDNETLIMRP 335

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
           M     +       + Y         L G + +  + G     +R+  +   D       
Sbjct: 336 MNCPHHMMVYKNSMHSYRSLPLRIAEL-GTMHRYEMSGAVSGLQRVRGMTLNDAHIFVRP 394

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
             +K    +       +  K  +L       +      D EK  ++     K     ++ 
Sbjct: 395 DQIKAEFQK-VVQLILEVYKDFDLNDYSF-RLSYRDPADTEKYFNDDAMWEKAQSMLKEA 452

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
            +EL    +     G  +         V+        +    L F +        V    
Sbjct: 453 MDEL--GLDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLSYVGE-- 508

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
                 DG   R    +            +   ++  + +         V +  + +++ 
Sbjct: 509 ------DGKPHRPVVIHRGVVSTM--ERFVAFLIEEYKGAFPTWLAPVQVEVIPVSNEA- 559

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                +   + L  AG+R EM     K  G +++ A  +  P  ++ G  E     + ++
Sbjct: 560 HFDYAKQIEEQLTAAGLRVEMDDREEK-LGYKIREAQMKKIPYMLVIGDKEVEASGVNVR 618

Query: 449 DLAKGKELSREIKNNESWREARV 471
                   +   +N  +  +A +
Sbjct: 619 RYGSKDSETISFENFLAAIKAEI 641


>gi|119963884|ref|YP_948047.1| threonyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|166223318|sp|A1R735|SYT_ARTAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119950743|gb|ABM09654.1| threonyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 669

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                L+ AGIRAE+ + S + F  +++ A +   P  +
Sbjct: 568 WLAPVQVVGIPVAETFNDYMFDVVGQLKAAGIRAEVDISSDR-FPKKIRTASKDKIPFVL 626

Query: 434 IQGTGERSRGMLQIKDLAKGKE 455
           I G  +   G +  +    G +
Sbjct: 627 IAGGEDAEAGAVSFR-FRDGSQ 647


>gi|94993836|ref|YP_601934.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|123080137|sp|Q1J7X1|SYT_STRPF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94547344|gb|ABF37390.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 647

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/378 (9%), Positives = 99/378 (26%), Gaps = 16/378 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +         Q D+  V    +  +  +  M       V 
Sbjct: 282 KELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVY 341

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 342 KNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFRRAL 401

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   +     ++  E+ +   +  K   +  +  +  
Sbjct: 402 QLIIDVY---ADFNLTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALD-EMGVDYF 457

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 458 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 506

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 507 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKT 566

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+RA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 567 LRDRGVRADVD-DRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTES 625

Query: 460 IKNNESWREARVAQITIP 477
           ++       A +A+ + P
Sbjct: 626 VEEFVENILADIARKSRP 643



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/323 (12%), Positives = 75/323 (23%), Gaps = 25/323 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F +
Sbjct: 260 GLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPV 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N           I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVRSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    I      I    R+ L  I++            
Sbjct: 359 GMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFRRALQLIIDVYADFNLTDYRF 418

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           RL      D    +    +             +          +       L I ++ ++
Sbjct: 419 RLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDIQVKTAL 478

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               E +                 + +   G     + I   ++  +E +T  + E   G
Sbjct: 479 -GNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKG 535

Query: 313 FPVMNEKQKPVVFGSVGGGGRYD 335
                     V    +      D
Sbjct: 536 AFPTWLAPHQVTVIPISNEAHID 558


>gi|160872889|ref|ZP_02063021.1| prolyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121688|gb|EDP47026.1| prolyl-tRNA synthetase [Rickettsiella grylli]
          Length = 572

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 46/160 (28%), Gaps = 4/160 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R+  ++   +R          +  P+L+ ++ L +     +  
Sbjct: 31  MIRKVASGIYSWLPLGLRVLRKVETIVREEMNRIHAQEVLLPILQPAE-LWQESERWEAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   L R+   ++  +       +             
Sbjct: 90  GPELLRLTDRHQRAFCLGPTHEEIITALVRHEVRSYKQLPLIFYQIQTKFRDEIRPRFGV 149

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
              +             +T+ +E   MM  +   +  +  
Sbjct: 150 MRAREFMMKDAYSFHPDKTSLSETYQMMHASYCRIFTRLG 189


>gi|29833364|ref|NP_827998.1| threonyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|73919829|sp|Q827U8|SYT_STRAW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29610487|dbj|BAC74533.1| putative threonyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 658

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/441 (11%), Positives = 116/441 (26%), Gaps = 66/441 (14%)

Query: 69  GVFSLQDDDGQWISL-RYDLTAPLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            +FS+ D  G  +++        + R V E                     + +      
Sbjct: 268 DLFSIPDQIGSGLAVFHPKG--GIVRRVMEDYSRRRHEEEGYEFVYTPHATKGKLFETSG 325

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
              +    +       E  D  +  M       +   R   +  +  R    G + +   
Sbjct: 326 HLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEK 385

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
            G      R       D       + +   L +  T    +  +   LT   +++     
Sbjct: 386 SGVVHGLTRARGFTQDDAHIYCTREKMADELDKTLTFVL-NLLRDYGLTDFYLEL----- 439

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELV----------RKSGYNSNRIKISST 294
                 S  +  + V      E+    L  ++E                     ++    
Sbjct: 440 ------STKDPEKFVGSDEVWEEATETLRQVAEKQGLPLVPDPGGAAFYGPKISVQAKDA 493

Query: 295 IVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           I R  +  T    +     F +            V                 +    F  
Sbjct: 494 IGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQRPVM----------------IHRALFGS 537

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                 V L+    +      + PV    +      +   Q +    +  G+R E+   S
Sbjct: 538 IERFFAVLLEHYAGAFPAW--LAPVQAVGIPIGDAHVEYLQKFAAEAKKKGLRVEVDSSS 595

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +    +++ A ++  P  +I G  + + G +  +    G + +                
Sbjct: 596 DR-MQKKIRNAQKQKVPFMVIAGDEDMTAGAVSFRY-RDGSQENG--------------- 638

Query: 474 ITIPISELVSTVKKILQENKE 494
             IP+ E ++ + K+++E  +
Sbjct: 639 --IPLDEAIAKIAKVVEERTQ 657


>gi|299144001|ref|ZP_07037081.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518486|gb|EFI42225.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 639

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN +L   RN+    G+  I+TP++  +++L       D   + ++  
Sbjct: 263 GFPFFHPNGMILRNELLGWWRNVLIENGYGEIQTPII-LNEALWHRSGHWDHYKENMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              DG+  +++           + N  +    P R    G V R+E  G   
Sbjct: 321 TKIDGEDYAVKPMNCPGSTIVYSTNPHSYRELPIRLSEFGQVHRHELSGALH 372



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/143 (9%), Positives = 45/143 (31%), Gaps = 3/143 (2%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            +    + +   +           + + ++              V I  +       +K 
Sbjct: 498 INEKGEKARPVMLHRALLGSVERFMGILIEHFAGKFPLWLSPIQVEIIPVSEKFAEFAKE 557

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 L+  G++  +    ++  G +++ A  +     ++ G  E + G L ++     
Sbjct: 558 LEI--KLKNTGLKVYLD-ERAEKVGYKIREAQLKKINYMLVVGEQEVNSGKLSVRKRNGE 614

Query: 454 KELSREIKNNESWREARVAQITI 476
           +    E++   +  ++ +    I
Sbjct: 615 EIKDCEVEEFINILKSEIESKEI 637


>gi|319943475|ref|ZP_08017757.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743290|gb|EFV95695.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 636

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/198 (11%), Positives = 52/198 (26%), Gaps = 4/198 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   I  RI   IR  Y+  G+  +  P +   D L K     D   + +F  
Sbjct: 261 GMVFWHPRGWTIWQRIEQYIREKYQKNGYQEVRCPQILDVD-LWKRSGHWDNYKENMF-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +++        +    +  +       Y         +              
Sbjct: 319 SESEKREYAVKPMNCPGHVQLFNASLRSYRDLPLRYAEFGSCHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     + ++   +    +       D+     + K+   +     L  D+  +  
Sbjct: 379 TQDDGHIFCTEEQVEAEVTAFHQQAMAVYRDFGFTDVSVKL--ALRPTQRLGTDEAWDRA 436

Query: 194 LIVLRAIDKLDKFGLQGV 211
              LRA         + +
Sbjct: 437 ENALRAALSACDVAWEEL 454



 Score = 43.3 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + PV +  +     +    +   Q L   G R    L   K  G +++    +  P
Sbjct: 532 MPTWLAPVQVAVLTVTDTAADYAEDIRQRLIKQGFRVISDLRGDK-IGYKIREHSLQKIP 590

Query: 431 LAIIQGTGERSRGMLQI-----KDLAK 452
             ++ G  +R  G L +     KDL  
Sbjct: 591 YLVVVGEKDRQAGTLAVRARGGKDLGS 617


>gi|288918333|ref|ZP_06412686.1| prolyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288350228|gb|EFC84452.1| prolyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 471

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 47/131 (35%), Gaps = 11/131 (8%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                       V++  +  D   ++K +  T  L  AG+R  +      +FG ++  A+
Sbjct: 279 GLRIPPALAPTQVIVLPVRDDEAVVAKAREITDALTAAGVRVSLDARPGLSFGRRVTDAE 338

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
            +  P+ +  G  + + G + +     G++    + +  +   A           L+  V
Sbjct: 339 LKGIPVRVEIGPRDLAAGNVTVARRDTGEKHPVPLTDVAARVPA-----------LLDDV 387

Query: 486 KKILQENKEEI 496
           +  +     E+
Sbjct: 388 QATIYAQALEL 398


>gi|157962683|ref|YP_001502717.1| prolyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083515|sp|A8H6J5|SYP_SHEPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157847683|gb|ABV88182.1| prolyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 570

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 33/109 (30%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  +I   +R      G   I  P+++ +D L       ++ 
Sbjct: 31  MIRRNASGLYSWLPTGLRVLRKIEAIVREEMNKAGSVEILMPMVQPAD-LWVETGRFEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +   QD   +   L     ++   + R    ++  +       +  
Sbjct: 90  GPELLRFQDRHNRDFVLGPTHEEVITDIVRKEVNSYKQLPLNLYQIQTK 138



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+       K   +   Q L  AGI         +  G  
Sbjct: 460 DDRGIIWPEAIAPFTVGILPMNMHKSHRVKDIAEQLYQDLNDAGIEVMFDDRKER-PGVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  ++ G      GM + K+   G++    +     + +A+ A
Sbjct: 519 FADMELIGIPHVVVIGDRNIDNGMFEYKNRRTGEKQDIPLDQIVEFLKAQQA 570


>gi|110598676|ref|ZP_01386941.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110339729|gb|EAT58239.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 657

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    D     +   Q L  AGIR+E+    ++  G +++ A+    P  I
Sbjct: 557 WLAPVQAVVLPIAEDVHDYAKSVQQALLGAGIRSELD-TRNEKIGKKIREAELAKVPCMI 615

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E+  G + ++    G E    +          +A  T
Sbjct: 616 VIGQKEKESGEVSLRRHRIGDEGCFTVTGLTEKLLKEIAART 657



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
            G      K   IRN +   ++      G+ P+ TP +   +   +  
Sbjct: 272 SGLPIWLPKGAIIRNELESFLKEEQRKRGYLPVYTPHIGNIELYKRSG 319


>gi|257455909|ref|ZP_05621126.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257446655|gb|EEV21681.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 642

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/310 (10%), Positives = 81/310 (26%), Gaps = 7/310 (2%)

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
              +       D +     ++ DY I   N      +  +      D             
Sbjct: 303 WEKSGHWENYGDMMFTTHSEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHR 362

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L G+ + +     D++  F     +  E  D +   L +  +    ++   +  
Sbjct: 363 NEPSGSLHGI-MRVRGFTQDDAHIFCSNEQIKQEAQDFIKLTLDVYKDFGFDDVQMKLST 421

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                 G +EL  ++E       ++  +        G  Y     +        + +   
Sbjct: 422 RPEKRVGADELWDLAEKDLADALDNAGLDWQYLPGEGAFYGPKIEFSLKDCLGRVWQCGT 481

Query: 322 ---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV 378
                      G    +    R +   +           + + ++               
Sbjct: 482 LQLDFNLPERLGAEFVNEQGERERPVMLHRAILGSFERFIGMLIEHYAGWMPVWLAPQQ- 540

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M+   +     Q   + L  AG+R    L  ++  G +++       P  I+ G  
Sbjct: 541 -VVVMNITDNQAPACQKVAEQLNQAGLRVITDL-RNEKIGFKIRERTLERIPYMIVMGDK 598

Query: 439 ERSRGMLQIK 448
           E     + ++
Sbjct: 599 EVESNQVNVR 608



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 11/149 (7%), Positives = 40/149 (26%), Gaps = 3/149 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   +R + ++ G+  I+TP +       K     +  
Sbjct: 255 MQEEAP-GMVFWHPNGWTMWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKS-GHWENY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 313 GDMMFTTH-SEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHG 371

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTL 155
                      +    ++ ++     D +
Sbjct: 372 IMRVRGFTQDDAHIFCSNEQIKQEAQDFI 400


>gi|238061935|ref|ZP_04606644.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237883746|gb|EEP72574.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 582

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 43/171 (25%), Gaps = 11/171 (6%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNN 371
           E       G          ++        P  G         VA                
Sbjct: 417 EVGHIFQLGRRYTDAFTVDVLGPAGKPVRPTMGCYGIGVSRAVAAIAEQHHDERGLVWPA 476

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +         L         L  AG+R  +   +  + G +   A+    P 
Sbjct: 477 AVAPCDVHLVAAGKGPQ-LDAALDLGTRLAAAGLRVLVDDRTHVSAGVKFTDAELIGLPR 535

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           A++ G    + G ++++D A G+     +            +      +LV
Sbjct: 536 AVVVGRR-LADGYVELRDRATGERTELPVAGLVDRLRDEALR---ARGDLV 582


>gi|300309711|ref|YP_003773803.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072496|gb|ADJ61895.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
          Length = 575

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 50/134 (37%), Gaps = 6/134 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R      G   +  P+++ ++ L +     ++ 
Sbjct: 31  MIKRLGAGIYTYMPMGLRVIRKVEAIVREEMNRAGAVELLMPVVQPAE-LWQETGRWNKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D  G+  +++    ++   +AR    ++  +      Y I   FR+E+    
Sbjct: 90  GAELMRVKDRHGRDFAIQPTSEEVVTDVARSELRSYKQLP--VNFYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVG 137
              +  +  + +  
Sbjct: 148 GLMRGREFTMKDAY 161


>gi|296129629|ref|YP_003636879.1| threonyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021444|gb|ADG74680.1| threonyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 670

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 19/112 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          Q     LR  G+RAE+     + FG +++ A  +  P  +
Sbjct: 568 WLAPVQVLAVPVAEPFEPYLQQVVDRLRAQGVRAEVDRSDDR-FGKKIRNASTQKIPFVL 626

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           I G  +   G +  +    G++ +                  +P+ E V  +
Sbjct: 627 IAGGEDADAGAVSFRY-RDGRQDNG-----------------VPVDEAVERI 660


>gi|262276504|ref|ZP_06054313.1| prolyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262220312|gb|EEY71628.1| prolyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 571

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R    N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLQKVENIVRQEINNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +    D   +   L     ++   L R    ++  +       +  
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITSLVRNEVNSYKQLPLNLYQIQTK 138



 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 35/112 (31%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     L  AGI         +  G  
Sbjct: 461 DENGIIWPDAIAPFTVAIVPMNMHKSERVKDAAEKLYAELTAAGIEVLFDDRKER-PGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  II G      G+ + K    G+++  +++N   + +A++A
Sbjct: 520 FSDMELIGIPHTIIIGERSMDNGVFEYKHRRNGEKVPVDMENMVEFLKAKLA 571


>gi|308233449|ref|ZP_07664186.1| threonyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328944509|ref|ZP_08241970.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327490910|gb|EGF22688.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 592

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 39/95 (41%), Gaps = 3/95 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       +RIRN +++  + + E +G++ I+TP++  S  L +     D   + +++ 
Sbjct: 214 GFPFWLPNGMRIRNALMNYWQEMQEKFGYEQIQTPVI-LSRKLWETSGHWDHYKENMYTT 272

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
           +  D +  +++          V  N          
Sbjct: 273 KI-DEEDFAIKPMNCPGAC-LVYMNKPRSYRDLPL 305



 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 50/147 (34%), Gaps = 5/147 (3%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D    + +   +   GF      + + ++  E           V +  +     + +  +
Sbjct: 450 DKDGQKKRPIMIHRAGFGSFERFIGMLIEQYEGKFPVWLAPLQVKVLPVS--EKTRAYAR 507

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN-CPLAIIQGTGERSRGMLQIKDLAKG 453
             TQ LR   IR ++     +  G +++ A   +  P  +I G  E   G + ++D    
Sbjct: 508 ELTQKLRDLKIRVKLD-DRDEKIGYKIREARSIDRVPYMLIVGEQEAQAGNISVRD-RTN 565

Query: 454 KELSREIKNNESWREARVAQITIPISE 480
                   +  +  +A+++       +
Sbjct: 566 TTKQYAFDDFVALLQAQISSRQDNQED 592


>gi|225028654|ref|ZP_03717846.1| hypothetical protein EUBHAL_02933 [Eubacterium hallii DSM 3353]
 gi|224954040|gb|EEG35249.1| hypothetical protein EUBHAL_02933 [Eubacterium hallii DSM 3353]
          Length = 591

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 69/231 (29%), Gaps = 7/231 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   A + +E I  +V  +    +K     +  +    A   G  E   ++    
Sbjct: 334 DDAHIFMTEAQIENE-IQKVVKLIDEVYKKFGFTYHVELSTRPADSMGTEEEWEVATNAL 392

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
           ++   +  I        G  Y     +          +                      
Sbjct: 393 ENAIKAMNIPYEVNEGDGAFYGPKLDFHLQDSIGRTWQCGTIQLDFQLPQRFEAEYIGAD 452

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + + ++           + PV    +          +   
Sbjct: 453 GEKHRPIMIHRVVFGSIERFIGILIEHYAGKFPTW--LAPVQAKVLPVSDKFADYAKQVA 510

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L+ +G+R E+     +  G +++ A  +  P  +I G  E+S G + ++
Sbjct: 511 EALKASGVRVEVD-DRDEKLGYKIRQAQLQKVPYMLILGEKEQSAGTVSVR 560



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + ++N ++D  R ++   G++ I TP+L  +  L +     D   + +++
Sbjct: 214 GFPFFLPKGMILKNTLIDYWRKMHTREGYEEISTPIL-LNRQLWETSGHWDHYRENMYT 271


>gi|156937107|ref|YP_001434903.1| anticodon-binding domain-containing protein [Ignicoccus hospitalis
           KIN4/I]
 gi|156566091|gb|ABU81496.1| Anticodon-binding domain protein [Ignicoccus hospitalis KIN4/I]
          Length = 552

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 81/306 (26%), Gaps = 15/306 (4%)

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
             I  +D  +  +  K    ++EK     D        +L   ++ D F     K    E
Sbjct: 228 CDISCSDGFLRCDEFKEHKQVVEKYADPNDLPFALFEQLLLFREEEDTFPCYRTK----E 283

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
                   F    +  S+    +   +  + EK   +       +    +   +L++   
Sbjct: 284 FHVPKVRIFVPSFSEASDVALTLHELIHTEAEKLGMKYVVSYTVSEELFEEAKDLIIKLV 343

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                      +K +   +         +Y        +      +    + G   Y   
Sbjct: 344 KRDNRCAYLRVVKSNEIFIDAE------MYVINSMGYPVELGTWKMRKALMWGREVYSVS 397

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            +        A       ++ +        +      + P+ +  +    D L       
Sbjct: 398 AAPLGSFERFAYVIFDKAAKDL----KSGETPELPAWLSPIQVRVIPKSRDVLPYALTVA 453

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + LR  GIR ++   +      +LK A     P  ++    E   G + +          
Sbjct: 454 EELRERGIRVDVDDRNVP-LSRKLKDAGEEWVPFLLLIDKREEKLGRVILMRRKTNDRED 512

Query: 458 REIKNN 463
             ++  
Sbjct: 513 VSLEEV 518


>gi|313892956|ref|ZP_07826533.1| threonine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442309|gb|EFR60724.1| threonine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 636

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++  + ++ I TP++  +  L +         + +++ 
Sbjct: 263 GFPFFLPKGMALRNELENFWREVHHEFDYEEIRTPII-LNKQLWETSGHWFHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              D +  +++          V +N            
Sbjct: 322 II-DDEEYAIKPMNCPGGI-LVYQNEMHSYRDFPLRY 356



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +      +   +   + +    +R E+    S+  G +++ A     P  +
Sbjct: 536 WMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVD-DRSEKIGYKIRQAQMAKVPYML 594

Query: 434 IQGTGERSRGMLQIK 448
           + G  E   G + ++
Sbjct: 595 VVGDKEVEEGTVNVR 609


>gi|290969075|ref|ZP_06560610.1| threonine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781031|gb|EFD93624.1| threonine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 635

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 68/224 (30%), Gaps = 6/224 (2%)

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            ++I  ++       ++   E +  +        G +E+   +           ++    
Sbjct: 393 KDEISGVMDLFDKAYKQFGLEYHVELSTRPEDSMGSDEIWESATKTLHEVIEEKQVPYVI 452

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---G 350
               G  Y     +          +         +    R+D       GQ         
Sbjct: 453 NEGDGAFYGPKLDFHLKDCLGRTWQCGTI--QLDMLMPERFDVTYIGEDGQKHRPVMVHR 510

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
              G     + + +   +      + PV I  +      L+  +   +  + AG+R E+ 
Sbjct: 511 ACFGSIERFLGIITENYAGAFPVWLAPVQIKFLPISDKQLAYAEDTARRFKKAGLRVEVD 570

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             SS+  G +++ A     P   I G  E + G + +++  +G 
Sbjct: 571 -TSSEKIGYKIRKAQMEKVPYMAIVGDKEMAAGTISVRERTQGD 613



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +L   R ++    +D I TP +  +  L +     D     ++  
Sbjct: 261 GFPFFHAKGMVLRNSLLKFWRELHAEADYDEIMTPTI-LNRQLWEQSGHWDHYRDNMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q  +++      
Sbjct: 319 TTIDEQPYAIKPMNCPG 335


>gi|254993456|ref|ZP_05275646.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 445

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/330 (9%), Positives = 88/330 (26%), Gaps = 7/330 (2%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M   + +       +   I  N+      +  +I   G     
Sbjct: 110 TSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRY 169

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L  + ++    L    + +   +  +         L   +   +  +      + 
Sbjct: 170 EMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIKDYSFRLSYRD 229

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                +        EK    L    + +    + +     ++     L+           
Sbjct: 230 PKNTEKYFDDDAMWEKAQAMLKSAMDEMEMDYFEAEG--EAAFYGPKLDVQVKTAIGKEE 287

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               +           +   G                +        +   ++  + +   
Sbjct: 288 TLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTME---RFVAYLIEEYKGAFPT 344

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 + +  ++ D+  L   +     L+ AG+RAE+    ++  G +++ A  +  P 
Sbjct: 345 WLAPVQMELIPVNADA-HLDYAKGVQDKLQRAGLRAEVD-DRNEKLGYKIREAQTKKIPY 402

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           A++ G  E   G + ++        + ++ 
Sbjct: 403 ALVLGDQEVEAGSVNVRRYGSKDSETMDLD 432



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 8/105 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 66  GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 124

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              D + + LR             +         +YR  P+   E
Sbjct: 125 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAE 162


>gi|300778181|ref|ZP_07088039.1| threonine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300503691|gb|EFK34831.1| threonine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 639

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 46/135 (34%), Gaps = 3/135 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + + L++                  +      +   +  +
Sbjct: 507 NEKHRPVMIHRAPFGSMERFIAILLENTAGDFPLWLSPDQ--FIILPISEKYVDYSKKVS 564

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           Q L    I  ++   + K  G +++ A+ +  P  ++ G  E   G + ++   +G    
Sbjct: 565 QFLENHDISGQIDDRNEKT-GKKIRDAELKKIPFMLVVGENEEKEGTISVRRRGEGDLGV 623

Query: 458 REIKNNESWREARVA 472
            ++++  ++ +   A
Sbjct: 624 MKLEDFVAYFKKEAA 638



 Score = 37.5 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/260 (10%), Positives = 69/260 (26%), Gaps = 11/260 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS- 72
           G      K   +R ++ + + +  +  G++ + +P +   +         D+  +  F  
Sbjct: 260 GLPLWLPKGTALRRKLENFLSDAQKKGGYEFVMSPHIGAKELYVTS-GHWDKYGEDSFQP 318

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           ++  + G+   L+             +   I    +        R  + G     +    
Sbjct: 319 IKTPNEGEEFLLKPMNCP--------HHCEIYKTSQWSYRDLPKRYAEFGTVYRYEQSGE 370

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                     T D        D L     K  D  + +      +  + ++ L   +   
Sbjct: 371 LHGLTRVRGFTQDDAHLFCTPDQLSEEFEKVIDLTLYVFKSLGFEDFVTQVSLRDPENKQ 430

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           + +      +K +   +   +    +   +       G  L     D +     +   + 
Sbjct: 431 KYIGSDENWEKAESAIINAAEKKGLKTVIEYGEAAFYGPKLDFMVKDALGRKWQLGTIQV 490

Query: 252 MHELYELVKGTIAGEKGFNE 271
            + L E       G      
Sbjct: 491 DYNLPERFDLHYIGSDNEKH 510


>gi|302528111|ref|ZP_07280453.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437006|gb|EFL08822.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 415

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR+ + + +R +    G+  + +P+L   +   +         + +F  
Sbjct: 36  GLPYLLPDGAAIRHVLEEYVREVERRAGYQHVSSPVLGKRELY-ELSGHWAHYREDMFPP 94

Query: 74  QDDDGQWISLRYDLTA 89
            D  G+ + LR  L  
Sbjct: 95  MDLGGEQVVLRPSLCP 110


>gi|327330301|gb|EGE72050.1| threonine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 689

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 86/252 (34%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESNSAKEEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    ++   +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAAAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTEFAEVLGSRGIRVETDLSSDR-FGKKIRNASKEKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQVNGVVLDEA 662


>gi|313674626|ref|YP_004052622.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Marivirga
           tractuosa DSM 4126]
 gi|312941324|gb|ADR20514.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Marivirga
           tractuosa DSM 4126]
          Length = 654

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 50/458 (10%), Positives = 112/458 (24%), Gaps = 75/458 (16%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+R+ + ++      G+ P+ TP                  NK ++  
Sbjct: 265 GLPLWLPKGTMLRDRLENFLKKAQVKAGYQPVITPH---------------IGNKELY-- 307

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                        +T+                   Y                +   +  +
Sbjct: 308 -------------ITSG--------------HYEKYGKDSFRPIAAPSDDDSKSDEEYLL 340

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +         +        L  + +              L G+        DD     
Sbjct: 341 KPMNCPHHCEIYKTKPRSYKDLP-LRLAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFC 399

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  D++ +  ++ + L+L    +    DF    +L     D    ++  D      
Sbjct: 400 RP-----DQVKEEFIKVIDLVLFVFNSLGFEDFVTQVSLRDP--DNREKYIGGDEVWDKA 452

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E   +      G K   EL                  +   + R  +  T    +     
Sbjct: 453 EKSIIEAAEEKGLKTVIELGE-----AAFYGPKLDFMVKDALGRSWQLGT---IQVDYNL 504

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P   + +              D    R    +    G       +++   +         
Sbjct: 505 PERFKLEYVGA----------DNSKHRPVMIHRAPFGSMERFVAVLIEHCAGNFPLWLSP 554

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           E     +  +                L    I   +     K  G +++ A+    P  +
Sbjct: 555 EQ----VAVLPISEKYADYANKVYSELEANDITGFIDHRDEK-IGRKIRDAEINKIPYML 609

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           I G  E +   + I+   +G   +  +++ +S+   +V
Sbjct: 610 IVGEQEAAEEKVSIRKHGEGDVGNMSLEDFKSFFNQKV 647


>gi|15791150|ref|NP_280974.1| glycyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236906|ref|YP_001690106.1| glycyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|10581762|gb|AAG20454.1| glycine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727972|emb|CAP14760.1| glycine--tRNA ligase [Halobacterium salinarum R1]
          Length = 576

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 26/91 (28%), Gaps = 2/91 (2%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V +  +        + +     LR AG+        S N G + +  D    P  + 
Sbjct: 473 PTTVGVFPLMDKDGLGERAREIAAELRAAGLAVT--YDDSGNIGRRYRRQDEVGTPYCVT 530

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNES 465
                   G + ++D     ++   I     
Sbjct: 531 VDYEALEEGAVTLRDRDTTTQVRVPIAEVAE 561



 Score = 37.1 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFLPDED 64
          GF     +   ++  I D+ R+ +    G   I++P +            +D
Sbjct: 27 GFYTYGPEGAALKRNIEDAWRDRFVTREGNMEIDSPTVTPEPVFQASGHLDD 78


>gi|229017690|ref|ZP_04174581.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|228743616|gb|EEL93725.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 639

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 68/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    +    +        G ++L   +E    +   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFQYEVELSTRPEDSMGDDKLWEQAEAALANVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AGIR E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPVWVAPVQVKVIPVS-NAVHVQYANEVAHKLAQAGIRVEE 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E     + ++    G+E S+ ++
Sbjct: 575 DIRDEK-LGYKIREAQMQKVPYVLVIGDKEMESEAVNVR--KYGEEESKIVE 623



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   K           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELWEKS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|225619417|ref|YP_002720643.1| prolyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254782887|sp|C0QY98|SYP_BRAHW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225214236|gb|ACN82970.1| prolyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 578

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 42/123 (34%), Gaps = 8/123 (6%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++     +++       DS  K +     L + G+         +  G +L   D 
Sbjct: 464 IFPISVAPYEAIVVAIDKETEDSFKKAEEIYNTLNSIGVETMFDDRKER-LGVKLNDCDL 522

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ II G     +G+++ K     + +  ++++   + +           EL + + 
Sbjct: 523 IGIPIRIIVGKKSLQKGVVEFKLRKSQESVEVKVEDIIEYVKT-------KKQELFNEIN 575

Query: 487 KIL 489
             L
Sbjct: 576 SRL 578



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ N+I + IR   +  G +    P+L   + L       +R  K +F L
Sbjct: 38  GLYSYLPLGVRVLNKISNIIREEMDAIGSNECIMPILVSKELLTPS-GRWERFKKELFRL 96

Query: 74  QDDDGQWISLRY 85
           +D +   +++  
Sbjct: 97  KDRNDVDMAMGP 108


>gi|172040525|ref|YP_001800239.1| prolyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|226699134|sp|B1VGB6|SYP_CORU7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171851829|emb|CAQ04805.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 592

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/159 (11%), Positives = 45/159 (28%), Gaps = 7/159 (4%)

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL------K 363
           +L      E       G          ++     + VP  G        ++A+       
Sbjct: 424 VLTLSRGIEIGHIFQLGRKYTEAFDVQILDENGRRTVPTMGSYGIGVSRLLAVVAEQMHD 483

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                         V +   + D  +    +   + L  AG+          + G + K 
Sbjct: 484 EKGLRWPRSIAPYDVHVVIANKDEAAGEAARELAEALSDAGLEVLFDDRPKVSPGVKFKD 543

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           ++    P  ++ G    + G ++++D    +    +  +
Sbjct: 544 SELLGMPQVVVVG-RGFAEGKVELRDRLNDERSEIDYAD 581



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+  ++ + +R   +  G   +  P L   E  +   +     D     +
Sbjct: 40  GVYSWLPMGLRVLRKVENVVRREMDAIGGQELMFPALLPKEPYEVTRR----WDEYGPEL 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D       L  
Sbjct: 96  FRLKDRKEADYLLGP 110


>gi|164659836|ref|XP_001731042.1| hypothetical protein MGL_2041 [Malassezia globosa CBS 7966]
 gi|159104940|gb|EDP43828.1| hypothetical protein MGL_2041 [Malassezia globosa CBS 7966]
          Length = 815

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++   IR++Y+ +G+D ++TP L +  SL K     ++  + +FS 
Sbjct: 342 GSPFVMPHGMRLLRKVERVIRDLYDTFGYDEVQTPQL-FRSSLWKQSGHWEKYREDMFSA 400

Query: 74  Q-----DDDGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           Q             L+          +  +       P R     P+ RNE  G
Sbjct: 401 QGFSCCGAHDDVFGLKPMNCPGHCVMFAHQPRSYRELPMRLAEFSPLHRNEASG 454


>gi|56965736|ref|YP_177470.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56911982|dbj|BAD66509.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 637

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/437 (10%), Positives = 105/437 (24%), Gaps = 92/437 (21%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IRN +   +RN+   Y +  + TP++     L +     D   + ++  
Sbjct: 263 GMPFYLANGQIIRNELESFLRNLQAKYDYKEVRTPIMMN-QRLWEQSGHWDHYKENMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD- 132
              D Q  +L+             +         +YR  P+   E     R       + 
Sbjct: 321 TQVDEQQFALKPMNCPG-------HMLIFKNGLHSYRDLPIRMAEFGQVHRHEFSGALNG 373

Query: 133 -VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
            +       + A   +     +    + +K  D+   +           K  +    + +
Sbjct: 374 LLRVRTFCQDDAHIFVTPQQIEEEITLALKIIDHVYQV--------FGFKYEIELSTRPD 425

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           + +      ++ +      ++ L    + +       G  +     D +         + 
Sbjct: 426 DFMGSEHLWEQAETALENVLQKLNYAYKVNEGDGAFYGPKIDIHIKDAIQRSHQCATVQL 485

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +L E    T   ++                             +        V+ +I 
Sbjct: 486 DFQLPEKFDLTYIDKQNEK--------------------------KRPVVIHRAVFGSID 519

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F  +  +     F                    V     S       + ++S       
Sbjct: 520 RFLGILIEHFAGAFPVWLA------------PVQVQIVPVSHVHLDYCLTIQSELKQVGV 567

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                      +D   + L         +R A                Q++       P 
Sbjct: 568 R--------VNIDESDEKLGY------KIRKA----------------QMQK-----IPC 592

Query: 432 AIIQGTGERSRGMLQIK 448
            I+ G  E     + ++
Sbjct: 593 TIVLGDNELKEETVTVR 609


>gi|308233721|ref|ZP_07664458.1| prolyl-tRNA synthetase [Atopobium vaginae DSM 15829]
          Length = 575

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 40/136 (29%), Gaps = 22/136 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQ 420
                          V +  +D HD       Q   + L  AGI   +   G        
Sbjct: 458 DEHGIIWPVSVAPYEVAVIPLDVHDETVWPVAQRLAEGLIKAGIEVIVDDRGERPGIK-- 515

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
              AD    P  ++ G    +   +++K+ A G+                     +P+ E
Sbjct: 516 FNDADLMGFPYQVVCGKKALAHACVEVKNRATGERT------------------EVPVDE 557

Query: 481 LVSTVKKILQENKEEI 496
           +V  +   +   ++ +
Sbjct: 558 VVDHLVHEIVPQRQGL 573



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 21/79 (26%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R   +I   IR   E      +  P+L  ++ L          
Sbjct: 35  MIRKAAAGLYSYLPLAWRSIQKIESIIREEMEAIDAQEMLAPILTDAE-LWHQSGRWGAY 93

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L D      +L  
Sbjct: 94  GPELMRLTDRHDHEYALGP 112


>gi|254932366|ref|ZP_05265725.1| prolyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293583922|gb|EFF95954.1| prolyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328475041|gb|EGF45829.1| prolyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332311762|gb|EGJ24857.1| Prolyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 568

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 79/256 (30%), Gaps = 6/256 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   D  K A    + I  +V FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKDMEKVATPDQKSIADIVEFLE 271

Query: 246 IDLEKSMHELYELVKG 261
           + +EK+M  +   V  
Sbjct: 272 VPIEKTMKSMLYQVDD 287



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNVKSEEQVAFAETLYSSLQDAGFSVLIDDRAERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 557


>gi|289674658|ref|ZP_06495548.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 172

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDRHNREFCLGPTHEEVITDLARNELNSYKQLP--INLYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|261368006|ref|ZP_05980889.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569994|gb|EFB75529.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 596

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/342 (11%), Positives = 94/342 (27%), Gaps = 10/342 (2%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M     +       +   I  N       +  +IG    D   
Sbjct: 258 TSGHWDHYRENMFPAMEMEGESYVLRPMNCPHHMMIYANQPHSYRQLPIRIGEIAHDFRY 317

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L+ I++   F      L +   +  +             +   +  +  +   + 
Sbjct: 318 ESSGTLKGIERGRHFCQNDAHLFVTPEQIKDEVAAVCALIFDVYKDFHITDYRCVLSLRD 377

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +  +              L  +   +      +  I  ++     L+        A  
Sbjct: 378 PADKKKYHDDDAMWNHAEQALREVLTEL--GIQFTEEIGEAAFYGPKLDVNVKPAVGAEY 435

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                                  D   S      +           +   ++  +     
Sbjct: 436 TLSTCQLDFCLPA---KFHLTYVDKDGSEKTPVVLHRAILGSLDRFMAYLIEETKGRFPT 492

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN-CP 430
              + PV +  +     +L   +     L+ AGIRA +   S++  G +++ A + +  P
Sbjct: 493 W--LAPVQVKVLPVSEKTLDYAREVNDKLKAAGIRAVLD-ESNEKIGYKIRLAQQEDRAP 549

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             ++ G  E   G + +++  KG+  + ++    +  +  +A
Sbjct: 550 YMLVLGAKEVEAGNISVRN-RKGETTAMDLDAFVAQVKDEIA 590



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 61/217 (28%), Gaps = 16/217 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG          +  ++ D I+      G+  + TP +   +   +     D   + +F 
Sbjct: 213 RGLPMFLPNGYIVWQQLEDYIKQKERERGYLHVMTPCIGTVNLY-RTSGHWDHYRENMFP 271

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ-- 130
             + +G+   LR             +         +YR  P+   E     R+       
Sbjct: 272 AMEMEGESYVLRPMNCP-------HHMMIYANQPHSYRQLPIRIGEIAHDFRYESSGTLK 324

Query: 131 -CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
             +        +         + D + AV     D +   +       +   +    D K
Sbjct: 325 GIERGRHFCQNDAHLFVTPEQIKDEVAAVCALIFDVYKDFHITDYRCVL--SLRDPADKK 382

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
                    A+    +  L+ V   LG   T+  G+ 
Sbjct: 383 KYHDD---DAMWNHAEQALREVLTELGIQFTEEIGEA 416


>gi|167629857|ref|YP_001680356.1| threonyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592597|gb|ABZ84345.1| threonyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 641

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/258 (9%), Positives = 64/258 (24%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + +  R  +   G+  + TP++       +         + ++  
Sbjct: 264 GFPFFFPKGMIIRNELENFWREEHARAGYREVRTPIILNRSLWERS-GHWANYRENMYVT 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q  D +   ++                         +    +R+     G      + ++
Sbjct: 323 QI-DEEDYCVKPMNCPG-------------GMLVYKQAIHSYRDLPLRMGELGLVHRHEI 368

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                                +    IK     +     ++         +    K  + 
Sbjct: 369 SGALHGLMRVRCFTQDDAHIFMTPGQIKDEIIGVIELIDRMYKTFGFAYHVELSTKPEKA 428

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      +       + +K    + + +       G  +     D +         +   
Sbjct: 429 MGSDEIWELATNSLEEALKAKGMDYKINPGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDF 488

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E    T  GE G   
Sbjct: 489 QMPERFDLTYVGEDGQKH 506



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 1/105 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +                L   G+R E+  G ++  G +++    +  P  +
Sbjct: 537 WLAPVQARVLPITDRHHEYAASVRSALAKQGVRVEVD-GRNEKIGYKIREGQVQKIPYLL 595

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           + G  E   G + ++   +G + +  +    +     +AQ   P 
Sbjct: 596 VVGDKEAENGAVAVRKRGEGDKGAMALDAFAAMILEEIAQKRNPE 640


>gi|240172755|ref|ZP_04751414.1| prolyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 582

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +   + D+++ +        L   G+   +      + G + K
Sbjct: 473 DELGLRWPPAIAPFDVHLVIANKDAEARTGAVALATELNQQGVEVLLD-DRQASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    P  ++ G    + G+++++D   G+
Sbjct: 532 DAELLGMPWIVVVG-RGWADGVVELRDRFSGQ 562



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 8/81 (9%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDED 64
           R   P G        +R+   I   +R      G   I  P L      ++  ++    D
Sbjct: 35  RPIAP-GLYSWLPLGLRVLRNIERVVREEMNAIGGQEILFPALLPRAPYETTNRWTEYGD 93

Query: 65  RPNKGVFSLQDDDGQWISLRY 85
                 F LQD  G    L  
Sbjct: 94  SV----FRLQDRRGNDYLLGP 110


>gi|221056250|ref|XP_002259263.1| threonine--trna ligase [Plasmodium knowlesi strain H]
 gi|193809334|emb|CAQ40036.1| threonine--trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 888

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/475 (10%), Positives = 121/475 (25%), Gaps = 57/475 (12%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 +I N+++D IR  Y    +D + TP +   D L +           +F    + 
Sbjct: 454 WLPHGAKIYNKLVDFIRREYRIRMYDEVITPNVFSCD-LWRTSGHYQNYKDCMFIFNVEQ 512

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +W  ++             +         +YR  P+   +     R             
Sbjct: 513 KEW-GMKPMNCPG-------HCIMFKQLNASYRSLPIRLADFGVLHRNEISGSLSGLTRV 564

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
              +  D+ +        E V    +          I D    K  L    +  + +  +
Sbjct: 565 RRFQQDDSHIFCTFDQIKEEVLNTLH------FIFFIYDLFGFKYELFLSTRPKKFIGNI 618

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D  ++                   D    AN++ +  +   +F    ++  + +   
Sbjct: 619 STWDFAEQ----------------GLKDALNSANISWKINEGDGAFYGPKIDILLRD--- 659

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                    +     +      R +    N+   +       E  T    E         
Sbjct: 660 ---SINRTHQCGTIQLDFQLPCRFNLQYKNKDFGALNEGDNAESGTMKREEVAEKGEGNQ 716

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
             Q      ++             +   +           + + ++              
Sbjct: 717 PSQNKGSDTNLPTDTAEQLKKGFDRPVIIHRAILGSVERFVAILIEHTAGKLPFWISPRQ 776

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
            ++  +    +  + Y    Q L       E+    +     +++ A        ++ G 
Sbjct: 777 AIVLPVSDKFNDYANY--VYQTLNNHFFDVEIDTSLN-TLNKKIREAQLNQFNFILVVGE 833

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
            E +   + +++                 R+ +       + EL++  +K+L  N
Sbjct: 834 KELTTNTVTVRN-----------------RDDQNNHEVCSLEELIARFRKLLDVN 871


>gi|157115843|ref|XP_001658309.1| threonyl-tRNA synthetase [Aedes aegypti]
 gi|108883479|gb|EAT47704.1| threonyl-tRNA synthetase [Aedes aegypti]
          Length = 716

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/228 (10%), Positives = 64/228 (28%), Gaps = 25/228 (10%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           EK   ++ V +E  +    + ++         G   + G   +  +   +    Q   + 
Sbjct: 498 EKYLGDIEVWNEAEKALAESLDKFGQPWKENPGDGAFYGPKIDITIMDALKRNHQCATIQ 557

Query: 326 GSV-----GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                         D    + +   +           + +  +S             V++
Sbjct: 558 LDFQLPIRFNLNYIDDSGEKKRPVIIHRAVLGSVERMIAILTESYAGKWPFWLSPRQVMV 617

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +    D  +      Q L  AG  AE  L +      +++ A        ++ G  ER
Sbjct: 618 VPVGPQYDDYAD--KVRQRLHEAGFMAEADLDAGDTMNKKIRNAQLAQFNFILVVGEKER 675

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           S   + ++                           + + +LV+ ++++
Sbjct: 676 SSETVNVR------------------TRDNKVHGEVSVDDLVAKLRRL 705



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 2/141 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + Y+  L +         + +FS +  +
Sbjct: 340 FQPKGAHIYNTLMNFIRDEYRKRGFQEVITPNI-YNAKLWQTSGHWQHYAENMFSFE-SE 397

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                +            V    +                  
Sbjct: 398 KETFALKPMNCPGHCLMFDHRNRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDD 457

Query: 138 SSAETADAEMCMMMADTLEAV 158
           +       ++   +   L+ +
Sbjct: 458 AHIFCMPDQIKQEIIGCLDFL 478


>gi|329893675|ref|ZP_08269809.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328923602|gb|EGG30914.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 571

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/160 (8%), Positives = 45/160 (28%), Gaps = 4/160 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  ++   +R   +  G   +  P+++ ++ L +      + 
Sbjct: 31  MIKKLASGLYTWMPLGLKVLRKVERIVREEMDAAGAIELLMPVVQPAE-LWQESGRWAQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  + D   +   L     ++   +AR    ++  +       +             
Sbjct: 90  GPELLRMHDRHTREFCLGPTHEEVITDIARNELSSYKQLPLNFYQIQTKFRDEIRPRFGV 149

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
              +             + +  E   +M      V  +  
Sbjct: 150 MRAREFTMKDAYSFHIDQASLEETYWVMHRAYSNVFDRLG 189



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 5/73 (6%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTG 438
             M          +     L  AGI   +   + +     +K+AD      P  I+ G  
Sbjct: 479 LNMQKSEAVAQAAETLYAQLTDAGIEVLLDDRNERP---GIKFADMELIGIPHRIVIGDR 535

Query: 439 ERSRGMLQIKDLA 451
             + G L+ K  A
Sbjct: 536 SLAEGQLEYKHRA 548


>gi|289705559|ref|ZP_06501951.1| threonine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557788|gb|EFD51087.1| threonine--tRNA ligase [Micrococcus luteus SK58]
          Length = 672

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 6/112 (5%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +     V I   +  +D L         LR  GIRA +   S + F  +++ A 
Sbjct: 564 GAFPAWLAPEQVVAIPVAEAFNDYLDD---VVAKLRAEGIRARLDDSSDR-FPKKIRTAA 619

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQITI 476
           +   P  +I G  +R    +  +    G + +   ++         V +  +
Sbjct: 620 KEKAPFVLIAGGEDREANAVSFR-FRDGTQDNGVPVEEAIERIVKAVREREV 670


>gi|15603235|ref|NP_246309.1| prolyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|81856712|sp|Q9CL72|SYP_PASMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|12721741|gb|AAK03454.1| ProS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 571

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 46/166 (27%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G        +R+ N++   IR   +  G   ++  + + ++ L +  
Sbjct: 26  MLRAGMIRP-LASGLYTWLPTGLRVLNKVEKIIREEMDKSGALEVKMAVTQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              +     +   +D   +   +     ++   L R       +    +      +R   
Sbjct: 84  GRWEEYGPELLRFKDRGERDFVIGPTNEEVITDLVRRELSSYKQLPLNLYHIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F               +     M    ++    +G
Sbjct: 144 RPRFGVMRSREFVMKDAYSFHTTHECLQKTYDVMYETYSNIFNRLG 189



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 34/140 (24%), Gaps = 3/140 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSK 392
           DG                +  + +            +      V I  M+          
Sbjct: 432 DGRPQTMIMGCYGIGVTRVIAAAIEQHHDERGIIWPDNIAPFKVAIVPMNMHKSESVQQF 491

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   + L   G+         +  G      +    P  I+ G     +G ++ K    
Sbjct: 492 AEELYRTLTAQGVEVIFDDRKER-PGVMFADMELIGVPHMIVIGEKNLEKGEIEYKYRRS 550

Query: 453 GKELSREIKNNESWREARVA 472
           G++            +A+ A
Sbjct: 551 GEKEMIAKDQLLDVLKAKFA 570


>gi|300709494|ref|YP_003735308.1| glycyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123177|gb|ADJ13516.1| glycyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 600

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 29/99 (29%), Gaps = 2/99 (2%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  V +  +        + +     LR AG+  E+    S N G + +  D    P
Sbjct: 477 PEMAPTTVGVFPLMDRDGLGERARELASELRAAGL--EVAYDDSGNIGRRYRRQDEVGTP 534

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             +         G + ++D     ++   I       + 
Sbjct: 535 FCVTVDYESLEDGTVTLRDRDSTTQVRVPIVQLVGVLDG 573



 Score = 37.9 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 16/48 (33%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
          GF     +   ++  + D+ R+ +    G   IE P +          
Sbjct: 35 GFYTYGPEGAALKRHLEDAWRDRFTVREGNREIEAPTVMPEAVFEASG 82


>gi|160946442|ref|ZP_02093651.1| hypothetical protein PEPMIC_00402 [Parvimonas micra ATCC 33270]
 gi|158447558|gb|EDP24553.1| hypothetical protein PEPMIC_00402 [Parvimonas micra ATCC 33270]
          Length = 567

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 73/511 (14%), Positives = 141/511 (27%), Gaps = 89/511 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R   ++ + +R   +  G   I    L+  +   +        
Sbjct: 31  MIRKSAAGIYSYLPLGYRTIRKVENIVREEMDRMGGYEILMSALQPKEI-WEESGRWQTF 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTA---------PLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +F ++D + +   L    TA            +   +    I      YR     R 
Sbjct: 90  GPEMFKVKDRNEREFCLGP--TAEEYFTTLISGEIKSYKQLPLNIYQIQTKYRDEKRPRF 147

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG------------IKRNDY 165
             +    F        D        +  EM          +G            +  N  
Sbjct: 148 GINRAREFSMKDAYTFDVSPEMMMESYKEMWKAYEKVFNRLGLNYKIVAGDAGAMGGNSS 207

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL-DKFGLQGVKLLLGEGRTDNSG 224
           H  I    + +G++      G    +E+  V+  +D+  D+  L+ V     +   D + 
Sbjct: 208 HEFIALSDVGEGVICYCDESGYAATDEKAEVIYKVDESGDEKELELVYTPNCKTIEDVAN 267

Query: 225 DFTKGANLTSEQIDIMVS------FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
              + A+   + ID++V+      F+  D E +M +L   +       +  +E     E 
Sbjct: 268 FLKQDASKCIKAIDLIVAGEPIIVFVPGDRELNMTKLCAYLGVPEHEVEMMDE-----ET 322

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYE-AILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
           + K G ++      +  VR +      + +  ++G    +       FG    G   D L
Sbjct: 323 IIKIGSSAGYTGPVNLKVRKILDKRVTLMKNTVVGGNKADHHYINCNFGRDFDGEIADDL 382

Query: 338 VSRFKGQNVPATGFSIGISRLIVA------------------LKSLESSTNNIKEMGPVL 379
           +   +G   P +G  +  +R I                    L     S         + 
Sbjct: 383 LMVQEGDVCPISGKPLKFARGIEVGNIFQLGTKYSKALNATFLDENGVSQYFWMGSHGIG 442

Query: 380 I-------------------------------TTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
           I                                   +D + +   +     L   G   E
Sbjct: 443 ITRSITAIIEQNNDEKGIIWPIQVAPYHAIVTVVNINDEEQMKLGEKIHDELEAQG--VE 500

Query: 409 MFLGSSK-NFGNQLKYADRRNCPLAIIQGTG 438
           + L   K   G +    D    PL I  G  
Sbjct: 501 VMLDDRKERIGVKFNDRDLIGIPLRITVGKK 531


>gi|56964462|ref|YP_176193.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56910705|dbj|BAD65232.1| threonyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 643

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 40/102 (39%), Gaps = 4/102 (3%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             +   L+  + +         V +  +  +   L   +   + L+ AG+R E+     +
Sbjct: 528 RFVAFLLEEYKGALPTWLAPVQVQVIPVS-NEVHLDYAKRVIEQLQQAGVRVEID-DRDE 585

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             G +++ A  +  P  ++ G  E +   + ++    G++ S
Sbjct: 586 KLGYKIREAQIQKIPYMLVLGDKEVAAEAVNVR--KYGEQAS 625



 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 50/185 (27%), Gaps = 8/185 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G+  + TP+L  S+   K     D     +F  
Sbjct: 265 GLPLWLPKGATIRRIIERYIVDKEERLGYQHVYTPILGSSELY-KTSGHWDHYQDDMFPP 323

Query: 74  QDDDGQWISLRYDLTA-------PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + D + + LR               R   +    I      +R             R  
Sbjct: 324 MEMDNETLVLRPMNCPHHMMVYKQDMRSYRQLPLRIAELGMMHRYEMSGAVSGLQRVRGM 383

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                 +       +     +  ++ +  +  G+    + +   + +  +   +   +  
Sbjct: 384 TLNDAHIFCRPDQIKEEFVRVVRLIQEVYKDFGLNDYKFRLSYRDPEDKEKYFDDDDMWN 443

Query: 187 DDKLN 191
             +  
Sbjct: 444 KAQAM 448


>gi|313497556|gb|ADR58922.1| ProS [Pseudomonas putida BIRD-1]
          Length = 571

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVMRKVEAVVREEMNAAGALEVLMPSIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L+D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRLKDRHQRDFCVGPTHEEVITDLARNELSSYKQLPLNLYQIQTK 138


>gi|304439592|ref|ZP_07399496.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371904|gb|EFM25506.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 647

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 3/106 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     L+T+G R EM    ++  G +++ A  R     +
Sbjct: 544 WLAPVQVEIIPVSEKFHDYAEEVKNKLKTSGFRVEMD-TRAEKVGYKIRQAQLRKVNYML 602

Query: 434 IQGTGERSRGMLQIKDLAKGKEL-SREIKNNESWREARVAQITIPI 478
           + G  E   G+L I+    G+E+   +I++  S  +  V +  I  
Sbjct: 603 VIGEQEVESGLLSIRK-RSGEEVKDVKIEDFISQMKEEVKEKKITE 647



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + ++N +L+  RN+    G+  I+TP++  +++L       D     ++  
Sbjct: 271 GFPFFLPHGMILKNTLLNWWRNVLLENGYGEIQTPII-LNEALWHRSGHWDHYKDNMY-F 328

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              DG+  +++            E   +    P R    G V R+E  G   
Sbjct: 329 TKIDGEDYAVKPMNCPGSILVYEEKAHSYRDLPIRLSEFGQVHRHELSGALH 380


>gi|26987940|ref|NP_743365.1| prolyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|81840777|sp|Q88NK2|SYP_PSEPK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24982651|gb|AAN66829.1|AE016311_9 prolyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 571

 Score = 58.3 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVMRKVEAVVREEMNAAGALEVLMPSIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L+D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRLKDRHQRDFCVGPTHEEVITDLARNELSSYKQLPLNLYQIQTK 138


>gi|238018994|ref|ZP_04599420.1| hypothetical protein VEIDISOL_00856 [Veillonella dispar ATCC 17748]
 gi|237864478|gb|EEP65768.1| hypothetical protein VEIDISOL_00856 [Veillonella dispar ATCC 17748]
          Length = 636

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++  + ++ I TP++  +  L +         + +++ 
Sbjct: 263 GFPFFLPKGMALRNELENFWREVHHEFDYEEIRTPII-LNKQLWETSGHWFHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              D +  +++          V +N            
Sbjct: 322 II-DDEEYAIKPMNCPGGI-LVYQNEMHSYRDFPLRY 356



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +      +   +   + +    +R E+    S+  G +++ A     P  +
Sbjct: 536 WMAPVQVKILPISEKHVEYAKELAKQMHRDYVRVEVD-DRSEKIGYKIRQAQMAKVPYML 594

Query: 434 IQGTGERSRGMLQIK 448
           + G  E   G + ++
Sbjct: 595 VVGDKEVEEGTVNVR 609


>gi|226295138|gb|EEH50558.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 559

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/450 (11%), Positives = 125/450 (27%), Gaps = 67/450 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N++   +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 93  GSPLFLPNGTHILNKLTSFLRAQYAQYGFREVLTPSI-YKKSLWEVSGHWQNYKDDMYEV 151

Query: 74  QDDD------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           +                +   L+          + ++N      P R     P+ RNE  
Sbjct: 152 RGRGASGETAKGEIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEIS 211

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           G           +  V    +      C         +G +        +      G  +
Sbjct: 212 GSLS-------GLTRVRRFHQDDGHIFCRPQ-----QIGSEIESALRFTDTVMNTFGFNK 259

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +       + +  +   D  ++     ++        +       G  +  +  D  
Sbjct: 260 YRLVLSTRPERDFIGSIELWDSAERQLRDALEKNGRSWELNEGDGAFYGPKIDMQVQDSD 319

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             F  +   +    L +  +   A  +G  +              +   K    ++    
Sbjct: 320 GKFHQLSTIQLDMNLPQRFELGYAVAEGEED-----------YNPATPGKAMPVLIHRAI 368

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           + +   + A+L                       +    R+     P  G  + +S+   
Sbjct: 369 FGSLERFFALL----------------------IENYNGRWPFWLSPRQGIILTVSQDEK 406

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM---YTQMLRTAGIRAEMFLGSSKNF 417
            L++ E +   +          ++ +S+S ++        Q       R ++   S+++ 
Sbjct: 407 LLQAAEDAATKMSGYPVHRNGELNSNSNSTAQPLKPISPAQT----TFRIDVD-TSARSL 461

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           G +++ A +    L  + G      G + I
Sbjct: 462 GKKIREAKKMKYNLIFVLGEKNLGDGSIDI 491


>gi|225677700|gb|EEH15984.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 559

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/450 (11%), Positives = 125/450 (27%), Gaps = 67/450 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N++   +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 93  GSPLFLPNGTHILNKLTSFLRAQYAQYGFREVLTPSI-YKKSLWEVSGHWQNYKDDMYEV 151

Query: 74  QDDD------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           +                +   L+          + ++N      P R     P+ RNE  
Sbjct: 152 RGRGASGETAKGEIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEIS 211

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           G           +  V    +      C         +G +        +      G  +
Sbjct: 212 GSLS-------GLTRVRRFHQDDGHIFCRPQ-----QIGSEIESALRFTDTVMNTFGFNK 259

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +       + +  +   D  ++     ++        +       G  +  +  D  
Sbjct: 260 YRLVLSTRPERDFIGSIELWDSAERQLRDALEKNGRSWELNEGDGAFYGPKIDMQVQDSD 319

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             F  +   +    L +  +   A  +G  +              +   K    ++    
Sbjct: 320 GKFHQLSTIQLDMNLPQRFELGYAVAEGEED-----------YNPATPGKAMPVLIHRAI 368

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           + +   + A+L                       +    R+     P  G  + +S+   
Sbjct: 369 FGSLERFFALL----------------------IENYNGRWPFWLSPRQGIILTVSQDEK 406

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM---YTQMLRTAGIRAEMFLGSSKNF 417
            L++ E +   +          ++ +S+S ++        Q       R ++   S+++ 
Sbjct: 407 LLQAAEDAATKMSGYPVHRNGELNSNSNSTAQPLKPISPAQT----TFRIDVD-TSARSL 461

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           G +++ A +    L  + G      G + I
Sbjct: 462 GKKIREAKKMKYNLIFVLGEKNLGDGSIDI 491


>gi|39935993|ref|NP_948269.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81829575|sp|Q6N5P6|SYP_RHOPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|39649847|emb|CAE28369.1| proline-tRNA ligase [Rhodopseudomonas palustris CGA009]
          Length = 438

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/454 (11%), Positives = 112/454 (24%), Gaps = 58/454 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R      G   +  P L+ +D L +     D         
Sbjct: 38  GIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLAD-LWRESGRYDAYG------ 90

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                       ++     R    +                          + +  +   
Sbjct: 91  -----------PEM----LRIADRHKRE------LLYGPTNEEMITEIFRAYIKSYKSLP 129

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            N+         E             + ++ Y   ++         +    +        
Sbjct: 130 LNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFARMG 189

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  +             ++   G    D S +F   A      + I    L++ +     
Sbjct: 190 LKAI------------PMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVP---D 234

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRGLEYYTGCVYEAILG 312
           E  +         K +  +   +E V +     + +  ++    RG+E      +     
Sbjct: 235 ENVDYDGDLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYS 294

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
             +      P    +   GG Y   VSR  G  + A                        
Sbjct: 295 DSMKANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACH------------DDNGIIWPEA 342

Query: 373 KEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                V I  +     +         + L   G+   ++  + +  G +   AD    P 
Sbjct: 343 VAPFRVTILNLKQGDAATDAACDQLYRELSAKGVDV-LYDDTDQRAGAKFATADLIGIPW 401

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            I  G    + G +++K  + G   +  + +  +
Sbjct: 402 QIHVGPRGLAEGKVELKRRSDGARENLALADVVA 435


>gi|148546477|ref|YP_001266579.1| prolyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166980143|sp|A5VZT5|SYP_PSEP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148510535|gb|ABQ77395.1| prolyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 571

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVMRKVEAVVREEMNAAGALEVLMPSIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L+D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRLKDRHQRDFCVGPTHEEVITDLARNELSSYKQLPLNLYQIQTK 138


>gi|46907545|ref|YP_013934.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093943|ref|ZP_00231680.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|254824622|ref|ZP_05229623.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852630|ref|ZP_05241978.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|255522074|ref|ZP_05389311.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300765441|ref|ZP_07075423.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|81830231|sp|Q720A3|SYP_LISMF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|46880813|gb|AAT04111.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47017681|gb|EAL08477.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258605946|gb|EEW18554.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293593860|gb|EFG01621.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300513878|gb|EFK40943.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328468602|gb|EGF39602.1| prolyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 568

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 79/256 (30%), Gaps = 6/256 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   D  K A    + I  +V FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKDMEKVATPDQKSIADIVEFLE 271

Query: 246 IDLEKSMHELYELVKG 261
           + +EK+M  +   V  
Sbjct: 272 VPIEKTMKSMLYQVDD 287



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNMKSEEQVAFAETLYSSLQDAGFSVLIDDRAERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 557


>gi|237746898|ref|ZP_04577378.1| prolyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378249|gb|EEO28340.1| prolyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 578

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 50/162 (30%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+ ++I + IR      G   +  PL++ ++ L +      + 
Sbjct: 31  MIRRLGSGIYAYMPMGLRVIHKIENIIREEMNRAGAVELLMPLVQPAE-LWQETGRWQKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   ++    ++   +AR V +++  +       +             
Sbjct: 90  GPELLRVKDRHDRDFIIQPTSEEVITDIARNVIKSYRQLPINFYHIQTKFRDERRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F        D   +  + +   M           G+K
Sbjct: 150 MRGREFTMKDAYSFDRDVAGLKKSYQVMFDAYIKIFTRFGLK 191



 Score = 41.4 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 34/112 (30%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  + +D      +        L+ AG+   M     +  G  
Sbjct: 466 DERGIIWPVSIAPFEVVLCPLGYDRSEMVRNTADKLYGTLKNAGLDVLMD-DRGERPGVM 524

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G      G L+ +     +  +  I +  ++ + ++A
Sbjct: 525 FSDWELIGIPHRIVIGERGLKEGKLEYQGRRDKEATAVAIDDMANFIKDKLA 576


>gi|15679452|ref|NP_276569.1| threonyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334360|sp|O27504|SYT_METTH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2622569|gb|AAB85930.1| threonyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 605

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/473 (10%), Positives = 115/473 (24%), Gaps = 86/473 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   IR+ + D +  +  + G  P+ETP+                    ++ L+D+ 
Sbjct: 218 WYPRGRLIRDLLADYVYMLVTSEGAMPVETPI--------------------MYDLEDE- 256

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                          R  AE F    +  +  +   +          F  F       + 
Sbjct: 257 -------------AIRVHAEKFGERQYRMKNRKELMLR-----YACCFGAFRILSDSFLT 298

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A        +  LE  G       +       L  +   +    ++   +  + +
Sbjct: 299 WKNLPASIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVCADLDQSLEEFARQVEMCM 358

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           R    L        +        +   ++        E  D +   +             
Sbjct: 359 RTGQDLQVNYEVIFRA--TADFYEEYREWVH------EVADKIGKPV------------- 397

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                         L+ I    +              + R +E  T           +  
Sbjct: 398 --------------LLEILPSRKHYWIAKMDFAAIDYLGRPIENPT---------VQIDV 434

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           E  +      V         +              I       A++  E        + P
Sbjct: 435 ESGERFGITYVNSDEEEVNPIILHCSPTGSIERV-ICSLLEKTAIEMDEKPPMLPLWLSP 493

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +  +      +         L  A +RA++    S+  G +++ A +   P  ++ G 
Sbjct: 494 TQVRVLPIAERHMEYASDLVSELIAADVRADLD-DRSETLGKKIRNAAQDWVPYVVVIGD 552

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
            E   G L +     G++L   +        A    +      L   + + + 
Sbjct: 553 SEME-GKLTVNVRETGEKLQMGLDELIERIRAETEGMPFRRLPLPVKLSERIN 604


>gi|210623612|ref|ZP_03293938.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275]
 gi|210153482|gb|EEA84488.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275]
          Length = 638

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/356 (10%), Positives = 91/356 (25%), Gaps = 8/356 (2%)

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            R  ++++ +   + +      +       + +  V I   DY I   N        +  
Sbjct: 283 HRAAEYVEIETPIILNRKLWETSGHWYHYKENMYTVKIDEEDYAIKPMNCPGGMLYYKSE 342

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D       + R         L G+ + +     D++  F     +  E   ++  
Sbjct: 343 MHSYRDFPMRVAELGRVHRHELSGALHGL-MRVRAFTQDDAHIFMLPEQIRDEIKGVISL 401

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
              I          EL            E       +R        +        G  Y 
Sbjct: 402 IDGIYKTFGFEYHLELSTRPEDSMGSDEEWEAAENGLR-GALEELNLPFVVNEGDGAFYG 460

Query: 303 TGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
               +          +       +                + +   +    F      + 
Sbjct: 461 PKIDFHLTDCIGRTWQCGTIQLDMQLPRQFDATYIGQDGEKHRPVMIHRVAFGSIERFIG 520

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + ++              V I  +          +   + L   G+R E+  G  +  G 
Sbjct: 521 ILIEQYAGKFPVWLAPTQVKIIPIS--DKYADYAEKVRKELFDNGLRVEVD-GRVEKVGF 577

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +++ A     P  +I G  E +   + ++   +G+  + E+       +A+V    
Sbjct: 578 KIREAQLEKVPYMVIVGEKEEAENNISVRSRDEGELGNVELAKFIEDVQAKVKSRE 633



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E   GF     K + ++N +L+  R ++    +  IETP++  +  L +        
Sbjct: 253 MIPEEGPGFPLMLPKGMALKNALLEYWREVHRAAEYVEIETPII-LNRKLWETSGHWYHY 311

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP 105
            + +++++  D +  +++         Y      +    
Sbjct: 312 KENMYTVKI-DEEDYAIKPMNCPGGMLYYKSEMHSYRDF 349


>gi|294786669|ref|ZP_06751923.1| proline--tRNA ligase [Parascardovia denticolens F0305]
 gi|294485502|gb|EFG33136.1| proline--tRNA ligase [Parascardovia denticolens F0305]
          Length = 601

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 39/128 (30%), Gaps = 1/128 (0%)

Query: 343 GQNVPATGFSIGISRLIVAL-KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
                  G S  +S +  A                 V +     D  +    +     L 
Sbjct: 469 WMGCYGIGVSRVMSCIAEAHHDDKGLIWPLSVAPAQVHLIATGKDQKAYDLAESLLGDLE 528

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            A +       +  + G + K ++    P+ ++ G    S G ++I++ A G++    + 
Sbjct: 529 KADVEVLYDDRAKMSPGVKFKDSELLGLPMIVVVGRDTLSDGTVEIRNRATGEKDVVPLD 588

Query: 462 NNESWREA 469
                 + 
Sbjct: 589 QAAQAVQD 596



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N+I   IR      G   +  P +   +         +     +F  
Sbjct: 47  GLYSWLPLGLKVLNKIEAIIREEINALGAQEVHFPAMMPREPYQMSN-RWEEYGDNIFRF 105

Query: 74  QDDDGQWISLRY 85
           +D  G    L  
Sbjct: 106 KDRHGADYLLAP 117


>gi|256422752|ref|YP_003123405.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256037660|gb|ACU61204.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 646

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/354 (11%), Positives = 97/354 (27%), Gaps = 29/354 (8%)

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
            + ++ +     + +  E  +  +  M       +       +  +  R    G + +  
Sbjct: 309 HYEKYGKDSFQPIHTPEEGEEFMLKPMNCPHHCEIYKSSPKSYKDLPVRFAEFGTVYRYE 368

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE------GRTDNSGDFTKGANLTSEQI 237
            HG+     R+      D         VK    +          +       A ++    
Sbjct: 369 QHGELHGLTRVRGFTQDDAHLFCRPDQVKEEFCKVIDLVLYVFQSLNFTDYTAQISLRDQ 428

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
           +    ++  D   ++ E   +      G K   E                   +   + R
Sbjct: 429 EDRAKYIGSDENWNLAEQAIIESAAEKGLKTVVEYGE-----AAFYGPKLDFMVKDALGR 483

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
             +  T    +     P   E +                   + +   +    F      
Sbjct: 484 KWQLGT---IQVDYNLPERFELEYVGA------------DNQKHRPVMIHRAPFGSLERF 528

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           + V ++              V I  +     +    +   ++L+   IRAE+    S+  
Sbjct: 529 IAVLIEHCGGKFPLWLTPTQVKILPIS--DKNQEYAEKVAELLKNVEIRAEID-DRSEKI 585

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           G +++  +    P  ++ G  E +   + ++  AKG   + +I    +  +  V
Sbjct: 586 GKKIRETELAKIPYMLVIGEKEAAESKVAVRRQAKGDLGAMDIDQFIALVKEEV 639


>gi|226223920|ref|YP_002758027.1| prolyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|259511604|sp|C1L2M5|SYP_LISMC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225876382|emb|CAS05091.1| prolyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
          Length = 568

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 79/256 (30%), Gaps = 6/256 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   D  K A    + I  +V FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKDMEKVATPDQKSIADIVEFLE 271

Query: 246 IDLEKSMHELYELVKG 261
           + +EK+M  +   V  
Sbjct: 272 VPIEKTMKSMLYQVDD 287



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNMKSEEQVAFAETLYSSLQDAGFSVLIDDRAERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 557


>gi|119476901|ref|ZP_01617182.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119449708|gb|EAW30945.1| prolyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 576

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P+++ S+ L +      + 
Sbjct: 31  MIRKLSSGLYSWLPMGLRVLRKVEAIVREEMNKAGAQELLMPVVQPSN-LWQESGRWQQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  + D       L     ++   L R   +++  +       +  
Sbjct: 90  GPELLRITDRHNNSFCLGPTHEEVITDLIRNEIKSYKQLPLNFYQIQTK 138



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 31/114 (27%), Gaps = 3/114 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDS--DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          + I  ++     D   +     Q L   G    +   + +  G +
Sbjct: 464 DEKGIIWPASIAPFQIAIIPLNMQKSVDVAEQSNKLYQQLSELGYEVLLDDRNER-PGVK 522

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
               +    P  I+ G      G ++ K     +    +I N   +    +A +
Sbjct: 523 FADMELIGIPHRIVIGDRGLKDGKMEYKGRQDSENQHIDISNIIDFIATSIAGV 576


>gi|146306290|ref|YP_001186755.1| prolyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166980142|sp|A4XRQ7|SYP_PSEMY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145574491|gb|ABP84023.1| prolyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 571

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R      G   +  P ++ ++ L +      + 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVENVVREEMNAAGALEVLMPAIQPAE-LWQESGRWVQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   +   +     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELLRVKDRHEREFCVGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFIMKDAYSFH 164


>gi|328545084|ref|YP_004305193.1| ATP phosphoribosyltransferase regulatory subunit [polymorphum
           gilvum SL003B-26A1]
 gi|326414826|gb|ADZ71889.1| ATP phosphoribosyltransferase regulatory subunit [Polymorphum
           gilvum SL003B-26A1]
          Length = 383

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 59/169 (34%), Gaps = 16/169 (9%)

Query: 21  KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
            E  +R          +E+ G+  +  P+L+ +D       ++ R  + +F     DG  
Sbjct: 12  AEAALRR---------FEDAGYTRVAPPILQPADIFLDLTGEDIR--RRLFLTNGSDGPD 60

Query: 81  ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
           + LR D T P+ R   E              GPVFR      G   Q     +      A
Sbjct: 61  LCLRPDFTIPVCRQHLETGPAGRQA-AYCYAGPVFRQRPGALGEIPQIGAESIGRSDHEA 119

Query: 141 ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
             ADA +  +    L+  G    D  I I +  +   IL  + L    +
Sbjct: 120 --ADAGILALAVAALDDFG--IGDVTIRIGDETLFTAILSGLDLPLAWQ 164


>gi|315226277|ref|ZP_07868065.1| proline--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|315120409|gb|EFT83541.1| proline--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 590

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 39/128 (30%), Gaps = 1/128 (0%)

Query: 343 GQNVPATGFSIGISRLIVAL-KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
                  G S  +S +  A                 V +     D  +    +     L 
Sbjct: 458 WMGCYGIGVSRVMSCIAEAHHDDKGLIWPLSVAPAQVHLIATGKDQKAYDLAESLLGDLE 517

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            A +       +  + G + K ++    P+ ++ G    S G ++I++ A G++    + 
Sbjct: 518 KADVEVLYDDRAKMSPGVKFKDSELLGLPMIVVVGRDTLSDGTVEIRNRATGEKDVVPLD 577

Query: 462 NNESWREA 469
                 + 
Sbjct: 578 QAAQAVQD 585



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++ N+I   IR      G   +  P +   +         +     +F  
Sbjct: 36  GLYSWLPLGLKVLNKIEAIIREEINALGAQEVHFPAMMPREPYQMSN-RWEEYGDNIFRF 94

Query: 74  QDDDGQWISLRY 85
           +D  G    L  
Sbjct: 95  KDRHGADYLLAP 106


>gi|269791845|ref|YP_003316749.1| tRNA synthetase class II (G H P and S) [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099480|gb|ACZ18467.1| tRNA synthetase class II (G H P and S) [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 395

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 122/400 (30%), Gaps = 58/400 (14%)

Query: 32  SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL 91
               ++  +G+ PI  P ++  D L + L      +  +  L    G+  +L +D+T   
Sbjct: 24  KAMEVFIRHGYRPIYPPSVQRLDDLWEVLEPSKAGS--IVPLTSPHGEPCALTFDVTVSA 81

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
              +    +    P R       FR        F    Q   + VG+  E AD E   + 
Sbjct: 82  VLKLMRQEERRQRPIRICYAERAFRRPDPPEESFEA-YQTGAEIVGADGEGADCEAIYLA 140

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
              L  +G+   D+   + +  +L   L  +      +L      LR  D +   G    
Sbjct: 141 DRALREMGM--GDHLFVVGDPAMLRRALRGLPRGMGQELM---GALRRRDLVAYRG---- 191

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
                            G      +  ++    ++  + S+ +                E
Sbjct: 192 --------------ILDGLG-DPPKAQLLRDIPNMKGDPSLLDRVRH-------RFDPRE 229

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L  +  +   +  +  RI    ++ R  +YY+G  +E                   +GGG
Sbjct: 230 LEDLDRIGEFARDSGVRIVFDLSLTRNPDYYSGPAFEIYAPDGTH-----------LGGG 278

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           GRYDGL+           G         + L +L S           ++          S
Sbjct: 279 GRYDGLLR--------RAGLLGQAVGFSLDLTALGSKAPMEVPPPRAMVWCGPLPP---S 327

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           K   +T+ L   GI  E+         + ++    +    
Sbjct: 328 KGLEFTRRLADRGITFEVSWHGRA--QSSMEICAMKGIRY 365


>gi|258515613|ref|YP_003191835.1| threonyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779318|gb|ACV63212.1| threonyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 634

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  +E  G+  I TP++  +  L +     D   + ++  
Sbjct: 261 GFPFFHPKGMILRNELEKFWRQEHEKRGYQEIRTPII-LNRVLWEQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 319 TQIDNFDFAVKPMNCPG 335



 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/374 (9%), Positives = 96/374 (25%), Gaps = 15/374 (4%)

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
                  +   +R E    G         ++ V              M  T         
Sbjct: 269 GMILRNELEKFWRQEHEKRGYQEIRTPIILNRVLWEQSGHWDHYKENMYFTQIDNFDFA- 327

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
                +N    +     K+  + +  +    + L    +L       +++      T + 
Sbjct: 328 --VKPMNCPGSMLIYKSKLHSYREFPIRMGELGLVHRHELSGVLHGLMRVR---CFTQDD 382

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
                      ++I  ++  +         + +  +        G +E+  ++    K  
Sbjct: 383 AHIFMLPGQVKDEIIGVIDLVDDFYSIFGFKYHVELSTKPEKAMGSDEVWDMATNTLKEA 442

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
             +  +        G  Y     +          +              ++D       G
Sbjct: 443 IEAKGLDYKVNEGDGAFYGPKIDFHLEDCLGRTWQCGTI--QLDFLMPEKFDLSYVGEDG 500

Query: 344 QNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           Q            G     + + +   +      + PV +  +                L
Sbjct: 501 QKHRPVMLHRVVFGSIERFIGILTEHFAGAFPTWLAPVQVRVLPITDRQSDYAVRVVDRL 560

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           +  GIR E+    ++  G +++ A  +  P  ++ G  E  + ++ I+      +    I
Sbjct: 561 KETGIRVELD-QRNEKIGYKIREAQTQKIPYMLVIGDKELEKELVAIRH---RSQGDLGI 616

Query: 461 KNNESWREARVAQI 474
              E + +    +I
Sbjct: 617 STLEDFIDKLQEEI 630


>gi|195978510|ref|YP_002123754.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975215|gb|ACG62741.1| threonyl-tRNA synthetase ThrS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 655

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 44/124 (35%), Gaps = 2/124 (1%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               + +++ + +         V +  + +++  +       + LR  GIRA++    ++
Sbjct: 533 RFTAILIETYKGAFPTWLAPRQVTVIPISNEA-HIDYAWEVAKTLRDHGIRADVD-DRNE 590

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               +++ +     P  +I G  E     + ++        +  I        A +A+ +
Sbjct: 591 KMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTEAIAAFVDNILADIARKS 650

Query: 476 IPIS 479
            P  
Sbjct: 651 RPAE 654



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 80/326 (24%), Gaps = 31/326 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 269 GLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 327

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N  H        I   
Sbjct: 328 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVHSYRELPIRIAEL 367

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    +      I    ++ L  I   I ++ D  L +
Sbjct: 368 GMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLI---IDVYEDFNLTD 424

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--- 249
               L   D  D          + E              +   + +   +F    L+   
Sbjct: 425 YRFRLSYRDPKDTHKYYDN-DEMWENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDIQV 483

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K+     E +                   +   G     + I   ++  +E +T  + E 
Sbjct: 484 KTALGNEETLSTIQLDFLLPERFN--LSYIGADGEEHRPVMIHRGVISTMERFTAILIET 541

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYD 335
             G        + V    +      D
Sbjct: 542 YKGAFPTWLAPRQVTVIPISNEAHID 567


>gi|269836488|ref|YP_003318716.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269785751|gb|ACZ37894.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 596

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +         L+ A +R E+   + +    +++ A  +  P  +
Sbjct: 488 WLAPVQAEVIPIADRHVPYAHEVAARLKEADLRVEVNDSNDR-MQAKIRRAQLQRIPYML 546

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E   G + ++ L   +
Sbjct: 547 VVGDKEAEAGTVAVR-LRTNE 566



 Score = 43.7 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 67/254 (26%), Gaps = 14/254 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   IR+ I       +   G+  + TP +   D   +     +   + ++S  D +
Sbjct: 218 WHPKGAMIRHLIERFETEEHLARGYQLVYTPHIASGDIY-RKSGHLETYQENMYSPMDIE 276

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G    L+             +        R+YR  P+   E     R+ +          
Sbjct: 277 GAPYYLKPMNCPG-------HIMIYNSQVRSYRDLPIRLAELGTVYRYERSGTLHGMLRV 329

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                 DA +        + +    +        R         +    +  +       
Sbjct: 330 RGFTQDDAHIFCRPDQLEDEIKGVLD--LALYFARVFGYEYEAFLATRPEKSIGSDENWE 387

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           RA + L       ++ +      D       G  +  + +D +    +    +    L E
Sbjct: 388 RATETLA----NALRNMGIPYEIDPGAGAFYGPKIDIKFLDSLGREWTGPTIQVDFNLPE 443

Query: 258 LVKGTIAGEKGFNE 271
               T  GE G   
Sbjct: 444 RFDATYVGEDGERH 457


>gi|33594237|ref|NP_881881.1| prolyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|81836185|sp|Q7VTZ8|SYP_BORPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33564312|emb|CAE43613.1| prolyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332383651|gb|AEE68498.1| prolyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 576

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 49/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  +I   +R      G   +  P+++ ++   +     ++ 
Sbjct: 31  MIRKLAGGIYTYMPLGLKVIRKIEGIVREEMNAAGAIELLMPVVQPAELWMES-GRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   L+    ++   +AR   +++  +       +             
Sbjct: 90  GAELLRIKDRHQRDFVLQPTSEEVITDIARNEIQSYRQLPLNFYHIQTKFRDERRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D   + A+ +   M        + +G
Sbjct: 150 MRGREFTMKDAYSFDRDEAGAQRSYDIMYAAYQRIFQRLG 189



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 10/121 (8%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  +                + LR  G+   +    S+  G  
Sbjct: 464 DARGIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRARGVDVMLDDRDSR-PGVM 522

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    PL +  G    + G++++       +  RE +  +   +  +AQ    +  
Sbjct: 523 FAEWELIGVPLRVTVGERGLNEGVVEL-------QARREAEAAKVPVDQALAQTLAKLDL 575

Query: 481 L 481
           L
Sbjct: 576 L 576


>gi|251777990|ref|ZP_04820910.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082305|gb|EES48195.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 643

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 72/245 (29%), Gaps = 7/245 (2%)

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            E I  ++  L ID + S              EK  N+    ++         + +KI  
Sbjct: 402 LELIKYIMKTLGIDEDISYRFSKW---DPNNTEKYINDPDAWNKTQDTMRTILDHLKIDY 458

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---G 350
                   + G   +         E     +        R+D       G+         
Sbjct: 459 VEADDEAAFYGPKLDLQFKNVHGKEDTIITLQIDFALAERFDMSYIDKNGEKKRPYIIHR 518

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
            SIG     +A+   + +      + PV +  +          +   + LR  G+R E  
Sbjct: 519 SSIGCYERTLAMLIEKYAGAFPTWLSPVQVKVLPISDKYNDYAESVVKSLRNKGVRIEAD 578

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             + K  G +++ A     P  ++ G  E +   + ++      E + ++          
Sbjct: 579 YRAEK-IGYKIREARLERTPYILVVGEKEAANSEVSVRSRKNDDEGAMKLDIFTERLLNE 637

Query: 471 VAQIT 475
           +A   
Sbjct: 638 IATKE 642



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   I +  E  G+   +TPL+  SD   K     D    G+F L
Sbjct: 260 GLPLLMPKGAKIVQTLQRWIEDEEERRGYVLTKTPLMAKSDLY-KISGHWDHYKDGMFVL 318

Query: 74  QD--DDGQWISLRYDLTAPL 91
            D   D +  +LR  +T P 
Sbjct: 319 GDEEKDEEVFALRP-MTCPF 337


>gi|67517326|ref|XP_658540.1| hypothetical protein AN0936.2 [Aspergillus nidulans FGSC A4]
 gi|40746809|gb|EAA65965.1| hypothetical protein AN0936.2 [Aspergillus nidulans FGSC A4]
 gi|259488776|tpe|CBF88493.1| TPA: threonyl-tRNA synthetase (AFU_orthologue; AFUA_1G16210)
           [Aspergillus nidulans FGSC A4]
          Length = 523

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 57/475 (12%), Positives = 124/475 (26%), Gaps = 74/475 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 78  GSPLFLPNGTHIINKLISFLRTQYLQYGFREVLTPTI-YKQSLWEVSGHWQNYKDDMYEV 136

Query: 74  QDDD-----------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +               +   L+          + ++N      P R     P+ RNE  G
Sbjct: 137 RGRGAMGDTEGEAGENESYGLKPMNCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEISG 196

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
                      V                +  +   A+G               L      
Sbjct: 197 SLSGLTR----VRRFHQDDGHIFCRPQQIKGEIKSALGFVDLVMTTFGLGPYRL------ 246

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             +       + +  L+  D  +    + +         +       G  +  +  D   
Sbjct: 247 --VLSTRPEKDFIGDLQLWDSAEAQLREALDQTGKNWAINEGDGAFYGPKIDIQLQDQAG 304

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +  +   +    L               EL        +    +   + +  ++    +
Sbjct: 305 KYHQLSTIQLDMNLPRRF-----------ELEYQVAEGEEDYNPATPGRATPVLIHRANF 353

Query: 302 YTGCVYEAILGFPVMNE--KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            +   + A+L                G +    + D +V +        +GF        
Sbjct: 354 GSLERFLALLIEQYSGRWPFWLSPRQGIILTVNQDDAVVKQAHEAAAQISGFKALDQN-- 411

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
               + +     +       +  +D  S +LSK                           
Sbjct: 412 ----AADGIPQPLSATDSTFLIDVDTSSQTLSKKIQRA---------------------K 446

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           Q+KY       L  I G  + + G + + D+  G +++ +  +N    +A + Q 
Sbjct: 447 QMKY------NLIFILGPKDLAEGRISV-DI-TG-QMNSKPDHNAEKLQAVLTQR 492


>gi|163733470|ref|ZP_02140913.1| prolyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161393258|gb|EDQ17584.1| prolyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 451

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/474 (9%), Positives = 122/474 (25%), Gaps = 61/474 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  ++ + +       G  P+  P ++ +D L +     D  
Sbjct: 31  MIKQNAAGIYSWLPLGFKVLRKLENIVHEEQIRAGHVPMLMPTMQSAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GPEMLRIRDRQDRDMLFGPTNEEMITDIFRSHVSSYKDLP--LTLYHIQWKFRDEMRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +                               ++ Y+  +     L      + 
Sbjct: 148 GVMRGREF----------------------------FMKDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A+    ++    + 
Sbjct: 180 SYLRTYERMGLQAI------------PMRADSGPIGGDDTHEFLVLADTGESEVFYDSAV 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
             +       +   + +     E+  N L   ++                   RG+E   
Sbjct: 228 TDLTFGDRDIDYDSVAQCQGVMEEFTN-LYARTDETHDQALFDAIPAERQRKARGIEVGQ 286

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +       +  + Q P            DG  +     +       +  + +  +  
Sbjct: 287 IFYFGTKYSDAMGAKVQGP------------DGKPTAVHMGSHGIGVSRLVGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                           I  +    +++ +        LR  G+   ++    +  G +  
Sbjct: 335 DKGIIWPEGVTPFHCGIVNLKQGDAEADAACDALYTSLRALGLD-PLYDDRKERAGGKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
             D    P  I  G      G++++     G+ +    +       +  A   +
Sbjct: 394 TMDLIGLPWRITVGPRGLKNGVVELTSRKSGESVEMPPEQAVEKIASIYATHHV 447


>gi|116626335|ref|YP_828491.1| threonyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116229497|gb|ABJ88206.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 644

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 40/106 (37%), Gaps = 3/106 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLA 432
            + PV  T +          +   + L  AGIRA +   + K N    ++ A  +  P  
Sbjct: 541 WLAPVQATILPITDRQTEYARGIKKQLEEAGIRATVDERNEKVNLK--IRDAQMQKIPYM 598

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           ++ G  E+  G + +++     +  + + +  +   A +    +  
Sbjct: 599 LVVGDREQESGKVAVRNRKHADQGVKTLADFIAEIRALIESKAVSE 644



 Score = 42.5 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 8/165 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  + D +R+ Y   G+  + TP +   D L K     +   + +F+ 
Sbjct: 262 GLIFFHPKGGIIRKLLEDWMRDQYLKRGYSLVYTPHVAKLD-LWKTSGHANFYAQNMFTP 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQ----- 127
            + D     L+           A+   +    P R   +G V+R E+ G           
Sbjct: 321 IELDDAEYQLKPMNCPFHILIYADRQRSYRDLPVRLGELGTVYRYERSGTLNGLFRVRGF 380

Query: 128 -FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
                 +  + S AE           DTL A G ++ D  I   +
Sbjct: 381 TQDDAHIFCMQSQAEEEVVNCLQFAIDTLAAYGFEKYDAEISTWD 425


>gi|71906284|ref|YP_283871.1| prolyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|114152186|sp|Q47ID0|SYP_DECAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71845905|gb|AAZ45401.1| Prolyl-tRNA synthetase, bacterial [Dechloromonas aromatica RCB]
          Length = 576

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 49/157 (31%), Gaps = 12/157 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++ + +R    N G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYTWMPLGLRVLRKVENIVREEMNNAGALELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK------HGPGR 124
           +D   +   +     ++   + R   +++  +      Y+I   FR+E            
Sbjct: 97  KDRHQREFVIGPTHEEVITDVVRRDVKSYRQLP--IHLYQIQTKFRDEIRPRFGVMRGRE 154

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
           F               +     M    +     +G+K
Sbjct: 155 FLMKDGYSFHASFDDLKREYGNMYDTYSRIFSRLGLK 191


>gi|319938817|ref|ZP_08013181.1| threonyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811867|gb|EFW08133.1| threonyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 650

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/333 (10%), Positives = 84/333 (25%), Gaps = 25/333 (7%)

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
             E +    F      D +            + +          +      +G+ +R   
Sbjct: 309 HWEHYQEDMFPPMDMGDGEQFVLRPMNCPHHIEVYKNHVHSYRELPIRIAELGMMHRFEK 368

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
            G L  +      ++      L  + +  +   + V  L+ +   D +            
Sbjct: 369 SGALSGLQRV--REMTLNDSHLFVMPEQIQEEFKHVLDLMIDVYKDFN---ITDYRFRLS 423

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
             D        D ++       ++KG        ++L    +     G  +         
Sbjct: 424 YRDPNDKHKYFDNDEMWENAQRMLKG------AMDDL--GLDYFEAEGEAAFYGPKLDVQ 475

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           V+        +    L F +                  Y G         +   G    +
Sbjct: 476 VKTALGNEETLSTIQLDFLLPERFDL-----------HYVGADGEEHRPVMIHRGIVSTM 524

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R I  L                +      +           + LR  G+R ++    ++
Sbjct: 525 ERFIAYLIETYKGAFPTWLAPHQVTVIPISNEAHADYAWKVAKELRNRGVRVDVD-ERNE 583

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +++ +     P  +I G  E++ G + ++
Sbjct: 584 KMQYKIRQSQTHKVPYQLIVGDKEQADGTVNVR 616



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +   N G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPDGATIRRIVERYITDREVNDGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPP 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEQFVLRPMNCP 337


>gi|33603207|ref|NP_890767.1| prolyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81836865|sp|Q7WFN9|SYP_BORBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33568838|emb|CAE34596.1| prolyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 576

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 49/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  +I   +R      G   +  P+++ ++   +     ++ 
Sbjct: 31  MIRKLAGGIYTYMPLGLKVIRKIEGIVREEMNAAGAIELLMPVVQPAELWMES-GRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   L+    ++   +AR   +++  +       +             
Sbjct: 90  GAELLRIKDRHQRDFVLQPTSEEVITDIARNEIQSYRQLPLNFYHIQTKFRDERRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D   + A+ +   M        + +G
Sbjct: 150 MRGREFTMKDAYSFDRDEAGAQRSYDIMYAAYQRIFQRLG 189



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 10/121 (8%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  +                + LR  G+   +    S+  G  
Sbjct: 464 DARGIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRARGVDVMLDDRDSR-PGVM 522

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    PL +  G    + G++++       +  RE +  +   +  +AQ    +  
Sbjct: 523 FAEWELIGVPLRVTVGERGLNEGVVEL-------QARREAEAAKVPVDQALAQTLAKLDL 575

Query: 481 L 481
           L
Sbjct: 576 L 576


>gi|83954043|ref|ZP_00962763.1| prolyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841080|gb|EAP80250.1| prolyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 446

 Score = 57.9 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/467 (8%), Positives = 113/467 (24%), Gaps = 61/467 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   +    +  G  P+  P L+ +D L K     D  
Sbjct: 31  MIKQSAAGIYSWLPLGFKVLRKIETIVHEEQQRAGHIPMLMPTLQSAD-LWKESGRFDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GPEMLRIKDRQDRDMLYGPTNEEMITDIFRSHVGSYKDLPM--TLYHIQWKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y   +     L      + 
Sbjct: 148 GVMRGREFLM----------------------------KDGYTFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A     +       
Sbjct: 180 TYLRSYERMGLQAI------------PMRADSGPIGGDDTHEFLVLAETGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D + +  +  +      + ++    +   +    ++    +    +           
Sbjct: 221 VFYDSQITELKFGDREIDYDSVDQCQAVMEEFTSRYARTDETHDEALFAEVPAERQRSAR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F     +               DG        +       +  + +  +  
Sbjct: 281 GIEVGQIFYFGTKYSEPMGATVQGP------DGKPVPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                         V I  +    +            L+  G+   ++  + +  G +  
Sbjct: 335 DKGIIWPEGVTPFHVGIVNLKQGDEQADAACDALYASLQALGLD-PLYDDTKERAGGKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             D    P  I  G      G++++     G+      +        
Sbjct: 394 TMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEEMTPEAAVEKIAG 440


>gi|326329871|ref|ZP_08196188.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325952338|gb|EGD44361.1| threonine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 659

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 31/95 (32%), Gaps = 1/95 (1%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + PV +  +                L+  GIR E+     + F  +++ A  +  P
Sbjct: 554 MPPWLAPVQVVGIPVADAFADYLYEVAGKLKAKGIRVEVDESDDR-FQKKIRNAQLQKIP 612

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             +I G  +  +G +  +     +E    +     
Sbjct: 613 FMLIAGGEDVEKGAVSFRYRDGRQENGIPVDEAIE 647


>gi|217967506|ref|YP_002353012.1| tRNA synthetase class II (G H P and S) [Dictyoglomus turgidum DSM
           6724]
 gi|217336605|gb|ACK42398.1| tRNA synthetase class II (G H P and S) [Dictyoglomus turgidum DSM
           6724]
          Length = 327

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 63/316 (19%), Positives = 121/316 (38%), Gaps = 53/316 (16%)

Query: 25  IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            R  +   IR   E +G++ I  P+L            ED   K      + +G++++LR
Sbjct: 2   KRESLEKIIRRRLELWGYNEIRIPIL-----------YEDIWGKENLIYFEKNGKFLALR 50

Query: 85  YDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
            ++T    R + ++      P R + +GP+F+          +  Q   + +   +   D
Sbjct: 51  PEIT----REILKSIRYDKIPKRMFYMGPIFKLNG---REVEENYQIGWELIYKPSLWRD 103

Query: 145 AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
            E+ +++ +  E +G+  +DY I + N KI D IL  I                      
Sbjct: 104 VEVLLIIKEVFEDIGV--DDYIIELGNTKIWDFILRFIK--------------------- 140

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLT-SEQIDIMVSFLSIDLEKSMHELYELVKGTI 263
               + VK L       +   F   ++L+ SE    +++    D         + V    
Sbjct: 141 --DEEKVKSLREFLVKRDYVSFLDKSDLSNSELKSEILNLFYYDSCDE-----DCVFLNS 193

Query: 264 AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPV 323
           +     N L    +L+ K G+  +++ ++  ++R  EYY G ++E  L     N K    
Sbjct: 194 SLRDEINFLNSFKKLLVKLGFKEDKLIVNPALMRPYEYYDGIIFEVYL----KNSKTSLG 249

Query: 324 VFGSVGGGGRYDGLVS 339
             GS     +Y+ L+ 
Sbjct: 250 GGGSYIERNKYNELLY 265


>gi|206889362|ref|YP_002248875.1| prolyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|226701352|sp|B5YKW0|SYP_THEYD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|206741300|gb|ACI20357.1| prolyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 571

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R +L  G         R+ N+I   ++   E  G   I  P+L  ++   +  
Sbjct: 26  MLKAGYVR-QLAAGLFIFLPLGWRVLNKINMILKEEMERIGAQEISMPILHPAEI-WQET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISL 83
                  + +F L+D  G+ + L
Sbjct: 84  GRWYTIKEEMFRLKDRTGRDMCL 106



 Score = 37.9 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 20/66 (30%), Gaps = 1/66 (1%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           T+    +   K            +   +     +  G + K AD    P+ I+ G     
Sbjct: 479 TVSIAEELYEKVTEIYNSFADRHMEVLIDDRDER-PGVKFKDADLIGIPIQIVIGKKGLK 537

Query: 442 RGMLQI 447
              ++I
Sbjct: 538 ENKVEI 543


>gi|160894708|ref|ZP_02075483.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50]
 gi|156863642|gb|EDO57073.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50]
          Length = 591

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/401 (10%), Positives = 112/401 (27%), Gaps = 28/401 (6%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +      ++    +   K     +R  +   V  V     +   +      +   A+ 
Sbjct: 205 MFLPKGYIVWQELENYIKNKERKLGYRHVMTPCVGTVNLYKTSGHWD--HYKDNMFPAME 262

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
           ++   + +   N      I         D       +           L+G++      +
Sbjct: 263 VEGESFVLRPMNCPHHMMIYANKMHSYKDLPIRIGEIAHDFRFEASGTLKGIERGRHFCQ 322

Query: 220 TDNSGDFTKGANLTS-EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
            D     T     +  +Q+  ++     D   + +     ++      K  ++  + +  
Sbjct: 323 NDAHLFVTPEQIESEFKQVVDLIFDTYKDFNITDYRCVLSLRDPEDKVKYHDDDEMWNTA 382

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY---- 334
                   + I I  T   G   + G   +  +   + NE              ++    
Sbjct: 383 EDALRKVLDDIGIEYTEEIGEAAFYGPKLDVNVKPAIGNEYTLSTCQLDFCLPAKFNLTY 442

Query: 335 -DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTM-DHDSDSLSK 392
            D   ++     +           +   L+  + +           I  + + D +  + 
Sbjct: 443 IDKDGTKKTPVVLHRAILGSLDRFMAYILEETKGNLPLWLAPVQARILPVKNEDEELNAY 502

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  L    IR E+    ++  G +++ A     P  II G  E +   +  +    
Sbjct: 503 AHELYDFLDDNNIRVEID-ERAEKLGYRVRAAQVEKVPYLIILGKNEVNDKTVSYR--LH 559

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           G++ +                 T+P+ E ++ ++  ++  K
Sbjct: 560 GEQKT----------------TTVPMDEFLAMLQDEIKTKK 584



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/230 (10%), Positives = 59/230 (25%), Gaps = 9/230 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   +   + + I+N     G+  + TP +   +   K     D     +F 
Sbjct: 201 RGLPMFLPKGYIVWQELENYIKNKERKLGYRHVMTPCVGTVNLY-KTSGHWDHYKDNMFP 259

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR             +         +Y+  P+   E     RF       
Sbjct: 260 AMEVEGESFVLRPMNCP-------HHMMIYANKMHSYKDLPIRIGEIAHDFRFEASGTL- 311

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                      +     +  + +E+   +  D          +      + L   +   +
Sbjct: 312 KGIERGRHFCQNDAHLFVTPEQIESEFKQVVDLIFDTYKDFNITDYRCVLSLRDPEDKVK 371

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                   +  +    + +  +  E   +       G  L       + +
Sbjct: 372 YHDDDEMWNTAEDALRKVLDDIGIEYTEEIGEAAFYGPKLDVNVKPAIGN 421


>gi|126725817|ref|ZP_01741659.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacterales
           bacterium HTCC2150]
 gi|126705021|gb|EBA04112.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacterales
           bacterium HTCC2150]
          Length = 353

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 100/333 (30%), Gaps = 35/333 (10%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD-DGQWI 81
             +R    D + + +   G   +E  +L+ +++      ++ R     +   D   G+ +
Sbjct: 5   AEVRQEA-DRLLSEFMAAGAVRVEAEILQPAETFLDLYGEDIRGRA--YVTHDPFRGEHL 61

Query: 82  SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
            LR D T P+ +    +      P R    G VFR  ++G  +  +  Q   +    +  
Sbjct: 62  -LRPDFTVPVVQA---HMAEGQEPARYTYAGAVFRAAENGASQAAETWQAGYEVFDRNDP 117

Query: 142 TADAEMCMMMADTL----------EAVGIKRNDYHIGINNRKILDGILEKIGLHGD-DKL 190
            A           L            +G+     +    + K    ++  I       KL
Sbjct: 118 VAVDAEVFARISELLTNVPVRAATGDIGVLMAAVNALDTSDKRRAALMRHIWRPAKFMKL 177

Query: 191 NERLIVLRAIDKLDKFGLQ----GVKLLLGEGRTDNSGDFTKGANLTS----EQIDIMVS 242
            +R                    GV+ +        + +    A          ID +++
Sbjct: 178 MKRFSSATIERPKAGMPANYPAIGVRDVSEVMERLKTLEEEVTAPSIKGEDVAVIDQILA 237

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L     +++ +L  +     A     + +    + +   G   + +    +  R     
Sbjct: 238 -LKEKSPEAVSQLRVMATNMPALMPAIDLIEARLDALTNRGVKVDDLDFEGSYGR----- 291

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
                E   GF          V  ++  GGRYD
Sbjct: 292 --TSMEYYDGFVFGFYGVSDNVETAIATGGRYD 322


>gi|148555262|ref|YP_001262844.1| prolyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|166980160|sp|A5V8U0|SYP_SPHWW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148500452|gb|ABQ68706.1| prolyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 437

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  +I   +R   +  G   +  P ++ +D L +     D  
Sbjct: 31  MIRQTAAGIYAWLPLGHRVLRKIEQIVREEQDRAGAIELLMPTMQSAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   + +       ++   + R  A ++  +       +  
Sbjct: 90  GPEMLRIKDRHDREMLFGPTNEEMITAIFRDNARSYRDLPRILYHIQWK 138



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%)

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
               L  AGI         +  G +    D    P  I+ G     +G++++K  A G++
Sbjct: 365 LYAKLEAAGIETLYDDRDERG-GAKFATMDLIGLPWQIVVGPKGLDKGVVELKRRATGEK 423

Query: 456 LSREIKN 462
           +   +++
Sbjct: 424 VELSVED 430


>gi|313201958|ref|YP_004040616.1| prolyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312441274|gb|ADQ85380.1| prolyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 574

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 50/168 (29%), Gaps = 9/168 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++  L  G        +R+  ++   +R+     G   +  P ++ ++ L +  
Sbjct: 26  MLRAGLIK-RLGSGLYTWMPLGLRVLRKVETVVRDEMNKAGALELLMPAVQPAE-LWQET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP---- 113
              D     +  + D   +         ++   LAR   +++  +       +       
Sbjct: 84  GRWDVFGPQMLKITDRHERSFCFGPTHEEVITDLARREIKSYKQLPLNFYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
             R        F             S E   A M    ++    +G+K
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHTSLESLEATYATMYQAYSNVFNRLGLK 191



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 30/108 (27%), Gaps = 19/108 (17%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           MD               L+ AGI   +     +  G      +    P  ++ G      
Sbjct: 486 MDRSDAVKDATLALYAELQQAGIDVLLD-DRGERPGVMFADLELIGIPHRVVIGDRGLKE 544

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           G +                  E          ++ +SE+VS +K+ L 
Sbjct: 545 GQV------------------EYQARTDEQAQSVALSEIVSKLKQALA 574


>gi|290889941|ref|ZP_06553027.1| hypothetical protein AWRIB429_0417 [Oenococcus oeni AWRIB429]
 gi|290480383|gb|EFD89021.1| hypothetical protein AWRIB429_0417 [Oenococcus oeni AWRIB429]
          Length = 663

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 54/486 (11%), Positives = 121/486 (24%), Gaps = 85/486 (17%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             E+  G          IR  I D +        +  + TP++   D   +     D   
Sbjct: 261 NPEIGAGLPVWLPNGAAIRRTIEDYLVEKERQNSYMNVYTPVVSNLDLYKRS-GHWDHYR 319

Query: 68  KGVF-SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
             +F ++  DDG+ + LR                             +F +E        
Sbjct: 320 DDMFPAMTADDGEQLELRPMNCPS--------------------HIEIFEHEPRSYRDLP 359

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
             I             A   +  +   TL           +    + IL  I +      
Sbjct: 360 YRIAEFGQMHRWEKSGALTGLSRVREMTLNDGHTVVAPEQVEPEFKGILQLIRDVYH-DF 418

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                +    L   D  +            +   D++      A L     D+ + +   
Sbjct: 419 GFTDQDYRFRLSYRDPKNT----------KKYYDDDAMWEHAQAALKRAMDDMGLDYFEA 468

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           + E + +                  L +  +    +    + I++   +    +      
Sbjct: 469 EGEAAFYGPK---------------LDIQFKTALGNEETMSTIQLDFLLPERFDMK---- 509

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
                G    + +   +  G VG   R+   +        P                   
Sbjct: 510 ---YTGEDGKDHRPVLIHRGVVGTMERFVAFLIEKYKGQFPT------------------ 548

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD- 425
                       ++  +++ +      +     L   G R ++     +  G  ++ A  
Sbjct: 549 -----WLAPVQAVVIPVNYGAHG-DYARNIYSKLMKDGRRIKLD-NRDEKLGYLIRDAQV 601

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
               P  ++ G  E     + ++     +    +I   E      VA  +         V
Sbjct: 602 NLKTPYILVVGDQELRDNSVTVRFRGSDQTKEMKIDEFEEMINDDVANYSKGSE----KV 657

Query: 486 KKILQE 491
           +++L +
Sbjct: 658 REMLNK 663


>gi|118472270|ref|YP_886958.1| prolyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|302595855|sp|A0QVM0|SYP_MYCS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118173557|gb|ABK74453.1| prolyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 585

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 2/110 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L     +      V +   + D+ + +        L   G    +F     + G + K
Sbjct: 477 DQLGLRWPSSVAPFDVHVVVANKDAGARAGAAELVADLDRLGHEV-LFDDRQASPGVKFK 535

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    P  ++ G    + G++++++   G+          +   + +A
Sbjct: 536 DAELLGMPWIVVVG-RGWADGVVELRNRFTGETREIAADGAAAEISSVLA 584



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLE---YSDSLGKFLPDEDRPNKGV 70
           G        +R+  +I + +R+     G   I  P L      ++  ++    D     +
Sbjct: 40  GIYSWLPLGLRVLRKIENVVRSEMNAIGAQEILLPALLPRGPYETTNRWTEYGDT----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD       L  
Sbjct: 96  FRLQDRRNNDYLLGP 110


>gi|160876899|ref|YP_001556215.1| tRNA synthetase class II [Shewanella baltica OS195]
 gi|160862421|gb|ABX50955.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS195]
 gi|315269103|gb|ADT95956.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS678]
          Length = 398

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/467 (8%), Positives = 105/467 (22%), Gaps = 96/467 (20%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P G          +   I + +R +Y   GF+ + TP+    +              
Sbjct: 18  PQAP-GMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKKELWQ----------- 65

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
                              T+      AEN                              
Sbjct: 66  -------------------TSGHMDMFAENMFFGGGKENMGEYV-----------LKPMS 95

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL--DGILEKIGLHG 186
               +        +       +    L          +  +  R+    D  +       
Sbjct: 96  CPAHILLFKRGVHSHRDLPLRLFEFGLVHRNESSGSLNGCLRARQFTQDDAHVFCCWSQA 155

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++++   L   + +     +    VK+     +   S +    A    +    +  F   
Sbjct: 156 EEEICGFLQRAKQVYGDYGYHNLDVKISTKPEKALGSDEQWCRAQKLLDSACQIEGFD-- 213

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                                                     + ++ ++ R  +  T   
Sbjct: 214 --------------------------AEYQAGEGAFYGPKIELSLTDSMGRRWQCGT-IQ 246

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           ++  L                    G ++  V   +        +        + L+  +
Sbjct: 247 FDFNLPE--------RFDVQYTNEQGEFERPVIMHQAMYGSIERWLG------ILLEVSQ 292

Query: 367 SSTNNIKEMGPVLITTMDHDSDSL---SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
            +  +     PV I +++  +             + +R       + +  + +   ++K 
Sbjct: 293 GNLPDWLHPVPVAIASVNESNSQFVRQLAALCLARDMR-----VLVDISQN-SVARKMKR 346

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             ++  P  +  G  E +   + +K    G      +     +   +
Sbjct: 347 FHKQKVPYILTVGDKEEAEKCVSVKCRKDGVMTHIPLAELADYLADK 393


>gi|325279133|ref|YP_004251675.1| threonyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324310942|gb|ADY31495.1| threonyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 650

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 42/134 (31%), Gaps = 3/134 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + V ++                +  M          Q  + +L
Sbjct: 513 HRPVMIHRAPFGSMERFVAVLIEHTGGKFPLWLAPDQ--VVVMPISEKFNDYAQKLSDLL 570

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
             + IR  +    ++  G +++  + +  P  +I G  E +   + ++   +G   +  +
Sbjct: 571 NNSDIRTVLD-DRNEKIGRKIRDNELKKIPYLLIVGENEMNNNTVSVRRQGQGDMGTMSV 629

Query: 461 KNNESWREARVAQI 474
           ++  S     V   
Sbjct: 630 EDFISKINEEVNSQ 643



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 3/74 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQD-- 75
              K   +R+R+   +R + + YG+  + TP +   +   K      +  K  F +    
Sbjct: 267 WLPKGAMLRDRLEGFLRKVQKKYGYQQVITPHIGNVNLY-KTSGHYQKYGKDSFQVITTP 325

Query: 76  DDGQWISLRYDLTA 89
            +G+   L+     
Sbjct: 326 QEGEEFMLKPMNCP 339


>gi|304403794|ref|ZP_07385456.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304346772|gb|EFM12604.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 637

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      L       + L  AGIRAE+    ++  G +++ A     P  +
Sbjct: 537 WLAPVQAKLLPVSDQYLDDAYAVKKQLEEAGIRAEVD-DRNEKLGYKIREAQLEKTPYML 595

Query: 434 IQGTGERSRGMLQIKDLAKGKEL 456
           I G  ER  G + ++    G+EL
Sbjct: 596 ILGENERGSGSVSVRK-RSGEEL 617



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 44/146 (30%), Gaps = 9/146 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + IRN +    R I     +  + TPL+   + + +     D     ++  
Sbjct: 264 GMPFYLPKGMAIRNELESFAREIQRLRAYAEVRTPLMMN-NRIWEQSGHWDHYKDNMY-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D    +L+             +         +YR  P+  +E     R         
Sbjct: 322 TQVDETKFALKPMNCPG-------HMLIYKNSRHSYRELPIRLSEFGQVHRHEFSGALSG 374

Query: 134 DNVGSSAETADAEMCMMMADTLEAVG 159
                +    DA + ++ +   E +G
Sbjct: 375 MMRVRTFCQDDAHLFVLPSQIEEEIG 400


>gi|257068210|ref|YP_003154465.1| prolyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559028|gb|ACU84875.1| prolyl-tRNA synthetase, family II [Brachybacterium faecium DSM
           4810]
          Length = 594

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 35/112 (31%), Gaps = 1/112 (0%)

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +                 V I     D    ++ +     L   G+          + G 
Sbjct: 481 LCHDEKGLCWPRQLAPADVHIVATGKDPAIFAEAERIAGALEARGLEVLYDDRPKVSPGV 540

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           + K ++    P +++ G    + G+++++D A G+      +       A V
Sbjct: 541 KFKDSELLGVPTSVVVG-RGLATGVVEVRDRAGGEIREVSPEEVVDAVTAEV 591



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++  ++   +R   +  G   +    L+  +         +     +F L
Sbjct: 39  GVYTWLPLGLKVLRKVEQIVREEQDAIGGQEVLFSALQPREPYEA-TGRWEDYGPNLFRL 97

Query: 74  QDDDGQWISLRY 85
           QD       L  
Sbjct: 98  QDRKQDDYLLAP 109


>gi|83942873|ref|ZP_00955333.1| prolyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83845881|gb|EAP83758.1| prolyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 446

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/467 (8%), Positives = 113/467 (24%), Gaps = 61/467 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   +    +  G  P+  P L+ +D L K     D  
Sbjct: 31  MIKQSAAGIYSWLPLGFKVLRKIETIVHEEQQRAGHIPMLMPTLQSAD-LWKESGRFDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GPEMLRIKDRQDRDMLYGPTNEEMITDIFRSHVGSYKDLPM--TLYHIQWKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y   +     L      + 
Sbjct: 148 GVMRGREFLM----------------------------KDGYTFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A     +       
Sbjct: 180 TYLRSYERMGLQAI------------PMRADSGPIGGDDTHEFLVLAETGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D + +  +  +      + ++    +   +    ++    +    +           
Sbjct: 221 VFYDSQITELKFGDREIDYDSVDQCQAVMEEFTSRYARTDETHDEALFAEVPAERQRSAR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F     +               DG        +       +  + +  +  
Sbjct: 281 GIEVGQIFYFGTKYSEPMGATVQGP------DGKPVPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                         V I  +    +            L+  G+   ++  + +  G +  
Sbjct: 335 DKGIIWPEGVTPFHVGIVNLKQGDEQADAACNALYASLQALGLD-PLYDDTKERAGGKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             D    P  I  G      G++++     G+      +        
Sbjct: 394 TMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEEMTPEAAIEKIAG 440


>gi|259416086|ref|ZP_05740006.1| prolyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259347525|gb|EEW59302.1| prolyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 451

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/477 (10%), Positives = 121/477 (25%), Gaps = 63/477 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R+  +I   +       G  P+  P ++ +D L +     D  
Sbjct: 31  MIKQSAAGIYSWLPLGYRVLKKIEGIVHEEQMRAGHIPMLMPTIQSAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  ++D   + +       +L   + R    ++  +      Y+I   FR+E     
Sbjct: 90  GEEMLRIRDRHDRDMLFTPTAEELITDIFRSNVSSYKDLP--LTMYQIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFYM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D + +F   A     ++     F
Sbjct: 180 TYLRTYERMGLQAI------------PMRADGGPIGGDYTHEFLVLAETGESEV-----F 222

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              ++        E+     + E+    L   +    ++    +    ++          
Sbjct: 223 YDSEITDLSFGAREI--DYDSVEQCQAVLEEFTSRYARTDETHDEALFNAVPEDRRRVAR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F     +      G+       D +        +  +     I        
Sbjct: 281 GIEVGQIFYFGTKYSE----ALGATVQTAEGDSVPVHMGSHGIGVSRLLGAIIEASH--D 334

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFGNQL 421
                           I  +   D ++ +  +     L   G+  E ++    +  G + 
Sbjct: 335 DKGIIWPEGVTPFHCGIVNLKQGDDEADAACEQLYAALTAIGL--EPLYDDRKERAGGKF 392

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
              D    P  I  G      G++++     G+      ++      A  A    P 
Sbjct: 393 ASMDLIGLPWRITVGPRGLKNGVVEVTSRRSGESEEMSPEDAVKKIAAIYANHPTPR 449


>gi|229096864|ref|ZP_04227833.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228686474|gb|EEL40383.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 639

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 42/161 (26%), Gaps = 9/161 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
                +    DA + +      + +                
Sbjct: 376 LLRVRTFCQDDAHLFVTPEQIEDEIKSVMGQIDYVYKTFGF 416



 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 67/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  ++  +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMGQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDVKNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYANEVADKLAQAGVRIER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   +  G +++ A  +  P  ++ G  E   G + ++    G+E S  + 
Sbjct: 575 DV-RDEKLGYKIREAQMQKIPYVLVIGDREMENGFVNVR--KYGEEKSEVVA 623


>gi|223044090|ref|ZP_03614129.1| threonyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442484|gb|EEE48590.1| threonyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 645

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 48/131 (36%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R E+    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVEIIPVNVD-LHYDYARQLQDELKSQGVRVEID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNEVNVRQYGSQDQETLE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645


>gi|149190039|ref|ZP_01868316.1| prolyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148836069|gb|EDL53029.1| prolyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 571

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 48/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GAELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E        +     K  D        
Sbjct: 146 RFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHEAYCKAFDRMGLDYRP 194



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSERVKEAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDIELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G +    ++   +   +++A
Sbjct: 540 DEGNFEYKNRRTGDKTPVAMEQIVAHVTSQLA 571


>gi|167035206|ref|YP_001670437.1| prolyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189083507|sp|B0KTK4|SYP_PSEPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166861694|gb|ABZ00102.1| prolyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 571

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVMRKVEAVVREEMNAAGALEVLMPSIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L+D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRLKDRHQRDFCVGPTHEEVITDLARNELSSYKQLPLNMYQIQTK 138


>gi|148979813|ref|ZP_01815720.1| prolyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145961607|gb|EDK26907.1| prolyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 572

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 44/169 (26%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    N                 +       
Sbjct: 90  GPELLRFTDRHSRPFVLSPTAEEVITSLVR----NEVNSYKQLPLNLYQIQTKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E        +        D        
Sbjct: 146 RFGVMRAREFSMMDAYSFDIDKEGLEKSYQAMHDAYCNAFDRMGLEYRP 194



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSEEVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDIELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G + +  I +      ++ A
Sbjct: 540 KEGNFEYKNRRAGTKEAVAIDSIVEHVTSQFA 571


>gi|187479380|ref|YP_787405.1| prolyl-tRNA synthetase [Bordetella avium 197N]
 gi|114152173|sp|Q2KVA0|SYP_BORA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115423967|emb|CAJ50520.1| prolyl-tRNA synthetase [Bordetella avium 197N]
          Length = 576

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 50/160 (31%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  ++   IR      G   +  P+++ ++ L +     ++ 
Sbjct: 31  MIRKLAGGIYSYMPLGLKVIRKVEHIIREEMNASGAIELLMPVVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
            + +  ++D   +   L+    ++   +AR    ++  +          +R     R   
Sbjct: 90  GQELLRIKDRHQRDFVLQPTSEEVITDIARNEIHSYRQLPVNFFHIQTKFRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D   + A  +   M          +G
Sbjct: 150 MRGREFTMKDAYSFDRDEAGAGRSYDIMFDAYHRIFRRLG 189



 Score = 40.2 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 3/87 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  +         +K +   Q LR  GI   +    ++  G  
Sbjct: 464 DNRGIIWPRAIAPFEVVICPVGWGKSETVRNKSEALYQALREQGIDVILDDRDAR-PGVM 522

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQI 447
               +    PL +  G    + G++++
Sbjct: 523 FAEWELIGVPLRVTIGDRGLNDGVIEL 549


>gi|253999985|ref|YP_003052048.1| prolyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253986664|gb|ACT51521.1| prolyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 574

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 50/168 (29%), Gaps = 9/168 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++  L  G        +R+  ++   +R+     G   +  P ++ ++ L +  
Sbjct: 26  MLRAGLIK-RLGSGLYTWMPLGLRVLRKVETVVRDEMNKAGALELLMPAVQPAE-LWQET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP---- 113
              D     +  + D   +         ++   LAR   +++  +       +       
Sbjct: 84  GRWDVFGPQMLKITDRHERSFCFGPTHEEVITDLARREIKSYKQLPLNFYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
             R        F             S E   A M    ++    +G+K
Sbjct: 144 RPRFGVMRAREFVMKDAYSFHTSLESLEATYASMYQAYSNVFNRLGLK 191



 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 30/108 (27%), Gaps = 19/108 (17%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           MD               L+ AGI   +     +  G      +    P  ++ G      
Sbjct: 486 MDRSDAVKDAALALYAELQQAGIDVLLD-DRGERPGVMFADLELIGIPHRVVIGDRGLKE 544

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           G +                  E          ++ +SE+VS +K+ L 
Sbjct: 545 GQV------------------EYQARTDEQAQSVALSEIVSKLKQALA 574


>gi|70726652|ref|YP_253566.1| prolyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|114152257|sp|Q4L5W5|SYP_STAHJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68447376|dbj|BAE04960.1| proline-tRNA ligase [Staphylococcus haemolyticus JCSC1435]
          Length = 566

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 75/260 (28%), Gaps = 13/260 (5%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   IR   E+     I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLASRVLNNISKIIREEMESIDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVF 115
                  +  L+D +G+  +L     ++   + R       +   T+      +R     
Sbjct: 86  WGAYGPELMRLKDRNGREFALGPTHEEVVTSIVRDELKSYKQLPLTLFQIQSKFRDEKRP 145

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R        F            +S +    +M        + VGI   +    + +   +
Sbjct: 146 RFGLLRGREFIMKDAYSFHADEASLDETYQDMYNAYDRIFKRVGI---NARPVVADSGAI 202

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
            G      +   +   + ++     D         V     E  T+ +           +
Sbjct: 203 GGNHTHEFMALSEIGEDTIVYSEHSDYAANIEKAEVVYHPNEKHTEVAELEKVETP-NVK 261

Query: 236 QIDIMVSFLSIDLEKSMHEL 255
               +  FL+  +++ +  +
Sbjct: 262 TAQELADFLNRPVDEIVKSM 281



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 9/120 (7%)

Query: 350 GFSIGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IG+SR + A+    +         ++      LIT      + L       + L+  
Sbjct: 439 CYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFDLHLITINPKKDEQLELGDQLYKELQQQ 498

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
                      +  G +   AD    P+ I+ G    S G++++K    G+     I + 
Sbjct: 499 -YDVLYDDRKDRA-GVKFNDADLIGLPIRIVVGKN-ASEGIVEVKVRQTGESEEVHINDL 555


>gi|86357812|ref|YP_469704.1| threonyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|123765783|sp|Q2K859|SYT_RHIEC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|86281914|gb|ABC90977.1| threonyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 668

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/357 (11%), Positives = 98/357 (27%), Gaps = 6/357 (1%)

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           +                 +   M        +         +   + +    G+     L
Sbjct: 305 WETSGHWGWYQENMFGVKSAHAMTHPDDKEADNRVFALKPMNCPGHVQIFKHGLKSYREL 364

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
               +L E  +V R        GL  V+    +       D    A        I+  + 
Sbjct: 365 PI--RLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHIFCTDEQMAAECLKINDLILSVYE 422

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG 304
               ++ + +L    +  +  +  ++    +   V K+    +  +I + I+ G   + G
Sbjct: 423 DFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLKTIEAQSEGRIKTGILPGEGAFYG 482

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVA 361
             +E  L   +  E Q            R+         +            G     + 
Sbjct: 483 PKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQPVMIHRAICGSMERFLG 542

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +     + +    + P+ +      S++ +      + LR AG+  E     ++    ++
Sbjct: 543 ILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALREAGLNVETDF-RNEKINYKI 601

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           +       P+ I+ G  E     + I+ L    ++S  +               +  
Sbjct: 602 REHSVTKVPVIIVCGRKEAEDRTVNIRRLGSQDQVSMGLDTAVESLALEATPPDVRR 658


>gi|330896119|gb|EGH28340.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 571

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 45/126 (35%), Gaps = 6/126 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              + +R+  ++   +R   +  G   I  P ++ ++ L +     ++    +  L D  
Sbjct: 42  WLPRGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQYGPELMRLVDRH 100

Query: 78  GQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
            +   L     ++   LAR    ++  +      Y+I   FR+E        +  +  + 
Sbjct: 101 NREFCLGPTHEEVITDLARNELNSYKQLP--INLYQIQTKFRDEIRPRFGLMRGREFVMK 158

Query: 135 NVGSSA 140
           +  S  
Sbjct: 159 DAYSFH 164


>gi|322807844|emb|CBZ05419.1| glycyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 463

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/226 (9%), Positives = 56/226 (24%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +   +     +       E +   +  ++   + +        +    +        
Sbjct: 238 EWFNYWKDYCWNFLINLGINKENIRFRDHSQEELSHYSNATSDIEFLFPFGWGELWGVAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F +    +      +       +  V      ++ A    +         + LE   
Sbjct: 298 RTDFDLKKHMEHSGEDLNYLDPATKERYVPYCIEPSLGADRVVLAFLVDAYDEEELEGGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        K Q    MLR    +  +    + + G + +  
Sbjct: 358 VRNVLHLHPALAPFKAAVLPLSKKLSDKSQEVYSMLRK---KFNIDYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  I           + I+D     ++   I   E + E +
Sbjct: 415 DEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVSINELEKFIEDK 460


>gi|314933837|ref|ZP_07841202.1| threonine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653987|gb|EFS17744.1| threonine--tRNA ligase [Staphylococcus caprae C87]
          Length = 645

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 48/131 (36%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R E+    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVEIIPVNVD-LHYDYARQLQDELKSQGVRVEID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNEVNVRQYGSQDQETLE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645


>gi|85711988|ref|ZP_01043042.1| Prolyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694174|gb|EAQ32118.1| Prolyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 569

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 48/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R+  ++   +R   E      I  P+++ +D L +     +  
Sbjct: 31  MIRKVASGLYTWTPTGLRVLKKVERVVREEMERINALEILMPMVQPAD-LWQESGRWEDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +  ++D   +   L     ++ + L R    ++  +          +R     R   
Sbjct: 90  GPELLRIKDRHERDFLLGPTHEEIISELVRKEVSSYKQLPLTLFQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S + A  EM        + +G
Sbjct: 150 MRAREFMMKDAYSFHLTDESLQQAYDEMYDAYCRIFQRLG 189



 Score = 40.2 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                +  N      V I  M+    +          Q LR AG    +F    +  G  
Sbjct: 457 DDRGINWPNELAPFEVAIVPMNMHKSARVQKVANELYQQLRDAGFDV-LFDDRKERPGVM 515

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G       M++ +  +   +    I +   + 
Sbjct: 516 FTDMELIGVPHQIVIGERNLDEEMVEYQSRSDRDKQKMPINSVLEFL 562


>gi|163854968|ref|YP_001629266.1| prolyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|226699121|sp|A9I4I5|SYP_BORPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163258696|emb|CAP40995.1| proS [Bordetella petrii]
          Length = 576

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  +I   +R   +  G   +  P+++ ++ L +     ++ 
Sbjct: 31  MIRKLAGGIYTYMPLGLKVIRKIEAIVRAEMDAAGAIELLMPVVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   L+    ++   +AR    ++  +       +             
Sbjct: 90  GAELLRIKDRHQRDFVLQPTSEEVITDIARNEIHSYRQLPLNFYHIQTKFRDERRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D   + A+ +  +M        E +G
Sbjct: 150 MRGREFTMKDAYSFDRDEAGAQQSYDKMYDAYMRIFERLG 189



 Score = 40.6 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 10/87 (11%), Positives = 26/87 (29%), Gaps = 3/87 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSD--SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V+I  +    +    ++       LR  G+   +    ++  G  
Sbjct: 464 DERGIIWPRAIAPFEVVICPVGWGKNETVRNESVKLYDALRARGVDVILDDRDAR-PGVM 522

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQI 447
               +    PL +  G    + G++++
Sbjct: 523 FAEWELIGVPLRVTVGERGLNDGVVEL 549


>gi|52078698|ref|YP_077489.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52784060|ref|YP_089889.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52001909|gb|AAU21851.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346562|gb|AAU39196.1| ThrZ [Bacillus licheniformis ATCC 14580]
          Length = 639

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/352 (10%), Positives = 97/352 (27%), Gaps = 8/352 (2%)

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           + +     + +      +       + +    +    + I   N      I +       
Sbjct: 293 YDEVHTPFMMNYRLWEKSGHWDHYQENMYFSEVDNTKFAIKPMNCPGHMLIFKNNLYSYR 352

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D         +         L G+  +      D++  F +   + SE I  +   +   
Sbjct: 353 DLPIRLAEYGQVHRHEFSGSLNGLLRVRT-FCQDDAHIFVREDQIESE-IKKVFHLIDQV 410

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                 E    +        G N L  +SE   K+  +   IK       G  Y     +
Sbjct: 411 YRTIGFEYSVELSTRPDDSLGNNHLWEVSEGSLKNVLDDLAIKYQVNEGDGAFYGPKIDF 470

Query: 308 EAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                    ++                   +    + +   +    F        + ++ 
Sbjct: 471 HIKDALKRSHQCGTIQLDFQMPEKFDLTYINHNNEKVRPVVIHRAIFGSIDRFFGILIEH 530

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        V I  + H    L         L+  GIR ++   S++  G +++ A
Sbjct: 531 FAGVFPVWLAPIQVQIIPISHI--HLEYCLGIKSELKQHGIRVQIN-ESNQKLGYKIREA 587

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
             +  P  ++ G  E     + ++   + ++ +  I++ +     ++   ++
Sbjct: 588 QVQKIPYTLVVGDNEIKENGVNVRKYGEEQQKNVSIESFKKNILQQIKTRSV 639



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 37/135 (27%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  +    R +  N  +D + TP +       K     D   + ++  
Sbjct: 265 GMPFYLPKGQIVRKELEKLSRELQNNASYDEVHTPFMMNYRLWEKS-GHWDHYQENMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +++             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNTKFAIKPMNCPG-------HMLIFKNNLYSYRDLPIRLAEYGQVHRHEFSGSLNG 375

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 376 LLRVRTFCQDDAHIF 390


>gi|308234806|ref|ZP_07665543.1| threonyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114574|ref|YP_003985795.1| threonine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946068|gb|ADP38772.1| threonine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 676

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 4/121 (3%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R    L    +       + PV +T +    +     Q +   L    +R EM     
Sbjct: 545 IERFFAILLEHYAGAFP-AWLAPVQVTGVPVADEFAPHLQKFISDLEENMVRCEMDSSDD 603

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQ 473
           + FG +++ A +   P  +I G  + +   +  +    G +L+   ++  + W  + + Q
Sbjct: 604 R-FGKKIRNASKSKVPFTLIAGEEDVNNNAVSFR-FRDGSQLNGVPVEQAKEWILSIIKQ 661

Query: 474 I 474
            
Sbjct: 662 R 662


>gi|255071699|ref|XP_002499524.1| predicted protein [Micromonas sp. RCC299]
 gi|226514786|gb|ACO60782.1| predicted protein [Micromonas sp. RCC299]
          Length = 613

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 60/462 (12%), Positives = 115/462 (24%), Gaps = 89/462 (19%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ I    ++I+   G+D + TP +   D                   
Sbjct: 236 GLVFWHPKGALMRDMIERFWKDIHLERGYDLLYTPHVGKLDLWK---------------- 279

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                         T+  A + +EN    +                  P      +    
Sbjct: 280 --------------TSGHADFYSENMYRPIDVEDETYQLK--------PMNCPFHVAVYK 317

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           D   S  +       M      E  G     + +                          
Sbjct: 318 DGYFSYRDLPIRWAEMGTVYRYERSGTMHGLFRVRGFT---------------------- 355

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  D    F L        +G  D + D          ++++            + 
Sbjct: 356 ------QDDAHIFCLPDQIADEIKGVLDLTEDILSTFGFKEFEVNLSTQPEKSVGGPEIW 409

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILG 312
           +  E        +KG++    + E           IKI   I R  +  T    +     
Sbjct: 410 DKAEGALKDALAQKGWDY--EVDEGGGAFYGPKIDIKILDAIGRKWQCSTVQLDFNLPER 467

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           F +    ++ V    +       G + RF G        +                    
Sbjct: 468 FDLAYIDKENVKQRPIMIHRAIFGSLERFFGILTENYAGAF------------------P 509

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P  +  +          Q   + LR AGIR ++   S +     ++ A++   P+ 
Sbjct: 510 LWIAPTQVRLLPVTDAVDDYVQETARKLRAAGIRCDV--QSQERLAKLVRNAEKAKIPVM 567

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            + G  E   G L ++  A G +    + +  +   A     
Sbjct: 568 CVVGEQEAKDGTLAVRTYADGDQGVLSVDDVVARISAANQGK 609


>gi|147668995|ref|YP_001213813.1| prolyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|189083496|sp|A5FS84|SYP_DEHSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146269943|gb|ABQ16935.1| prolyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 569

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/380 (12%), Positives = 100/380 (26%), Gaps = 22/380 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           + A+L  G         R   +I   IR      G   +  P+L+  +   +    E   
Sbjct: 31  MIAQLTAGVYSFMPLAWRSIQKIETIIRQEMNKAGCQELAMPVLQPVEIWQQS-GREAPF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFRNEK 119
            + +F L+D   + + L     ++   LA    +++  +       +      P  R   
Sbjct: 90  GQTLFHLKDRKDRNLVLGPTHEEVITDLASRYIQSYRDLPQRLYQIQAKFRDEPRPRGGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN--DYHIGINNRKILDG 177
                F        D      + +   M           G++    D   G    K    
Sbjct: 150 IRVREFIMKDMYSFDASPEGLDDSYQTMKQAYESVYRRCGLESMVIDADSGAIGGKASHE 209

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
            +       D  +        A  +   F  + +     +       D  + A    + I
Sbjct: 210 FMIVAESGEDSIIYCPKCSYAANAEKAVFKKKTLSKETLK-------DLEEVATPGQKAI 262

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  FL++  E ++  ++ +  G         +L +    ++     ++        V+
Sbjct: 263 SDVARFLAVKPENTLKAVFYMADGKFVMAVIRGDLDINEVKLKNLLKCNDLRLAEDGEVK 322

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
                 G      L   ++          +   G   DG             G      +
Sbjct: 323 AAGVVAGSASPVGLKNILIVADDSVENGSNFVAGANKDGF-----HLKNVNCGRDFRADK 377

Query: 358 LIVALKSLESSTNNIKEMGP 377
           +     + E S     +   
Sbjct: 378 MADIALAAEGSACPFCDGTF 397


>gi|315635477|ref|ZP_07890743.1| threonine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315480235|gb|EFU70902.1| threonine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 602

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 7/79 (8%), Positives = 34/79 (43%), Gaps = 1/79 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +      +   +   + L    + +E++   +++   +++ A+++  P+ ++ G
Sbjct: 504 PTQVIFVPIADSHVEYAKELQKALLENDLDSEIY-NMNESLNKRIRMAEKQRVPMIVVIG 562

Query: 437 TGERSRGMLQIKDLAKGKE 455
             E     + +++    ++
Sbjct: 563 DEEVENKTVALRNRRTREQ 581



 Score = 37.1 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K  R+R+++   +   +   G++P+  P +  ++ + K         + ++     D
Sbjct: 232 WLPKGARLRSKLEHLLYKAHRIRGYEPVRGPEILKAE-MWKISGHYANYKENMY-FTTID 289

Query: 78  GQWISLRYDLTAP 90
            Q   ++      
Sbjct: 290 DQEYGIKPMNCVG 302


>gi|227486766|ref|ZP_03917082.1| proline--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235236|gb|EEI85251.1| proline--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 563

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++ N+I   +R+  ++YG   + T +L+      K     +     +F 
Sbjct: 30  SGIYSFLPLGKKVLNKIEAIVRDAMDSYGAIEVATSILQPRQIWDKST-RWETFGPEMFK 88

Query: 73  LQDDDGQWISLRY 85
           L+D   +  +L  
Sbjct: 89  LKDRHEREYALGP 101


>gi|82701621|ref|YP_411187.1| threonyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123727233|sp|Q2YBS6|SYT_NITMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|82409686|gb|ABB73795.1| Ser-tRNA(Thr) hydrolase [Nitrosospira multiformis ATCC 25196]
          Length = 638

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 45/160 (28%), Gaps = 2/160 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R+I+ N G+  I TP +       +     +   + +F  
Sbjct: 261 GMVFWHPKGWVVWQQVEQYMRDIFRNNGYLEIRTPSVLDKGLWERS-GHWENFRENMFVT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q +D +  S++        +   +   +                 +              
Sbjct: 320 QAED-REFSVKPMNCPGHVQVFKQGLKSYRDLPLRLAEFGSCHRNEPSGALHGIMRVRAF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
               +     ++++       ++ +    ND+       K
Sbjct: 379 TQDDAHIFCTESQVQDEAVQFIDLLQKVYNDFGFNDILVK 418



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 83/276 (30%), Gaps = 24/276 (8%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   + +  E +  +     +  +   +++   +    A   G  E    +E   
Sbjct: 381 DDAHIFCTESQVQDEAVQFIDLLQKVYNDFGFNDILVKLSTRPAKRVGSEEQWDKAEEAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
           +S  N   +        G  Y     +        + +              G       
Sbjct: 441 RSALNHKNLIWELQPGEGAFYGPKIEFSLKDSIGRIWQCGTLQLDFSMPERLGAEFVAED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + +++   +          ++  +          +  T
Sbjct: 501 NSRQIPVMLHRAILGSLERFIGILIENHAGALPLWLSPDHAVVLNISEGQA--DYAREVT 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + LR AGIRA   L  ++    +++    +  P  II G  E +   + ++         
Sbjct: 559 EELRRAGIRAYADL-RNEKITYKIREHSLQKLPYQIIVGDKEVAAQRVAVR--------- 608

Query: 458 REIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                  +   + + Q+T+P   LV  +K+ ++   
Sbjct: 609 -------TRSGSDLGQMTLPA--LVDRLKEEIRTRA 635


>gi|68536224|ref|YP_250929.1| prolyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|260578924|ref|ZP_05846827.1| proline--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|114152185|sp|Q4JV46|SYP_CORJK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68263823|emb|CAI37311.1| proS [Corynebacterium jeikeium K411]
 gi|258602898|gb|EEW16172.1| proline--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 596

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/151 (11%), Positives = 43/151 (28%), Gaps = 7/151 (4%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI------VALKSLESSTNN 371
           E       G          ++     ++VP  G        +        L         
Sbjct: 432 EIGHIFQLGRKYTEAFDVKILDESGKRSVPTMGSYGVGVSRLVGVIAEQMLDDSGLRWPA 491

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D+ +        + L   G+          + G + K ++    PL
Sbjct: 492 SVAPFDVHVVIANKDAAAGEAAVELVETLSNDGLEVLFDDRPKVSPGVKFKDSELLGMPL 551

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            ++ G    + G +++++   G+    +  +
Sbjct: 552 VVVVG-RGFADGKVELRNRLTGETYEVDYTD 581



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 12/112 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+   I   +R      G   I  P L   E  D+ G+++   D     +
Sbjct: 40  GVYSWLPLGLRVLRNIEAVVREEMNAIGAQEISFPALLPREPYDTTGRWVEYGDA----L 95

Query: 71  FSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           F L+D       L     ++   + +  +E      FP   Y++   +R+E+
Sbjct: 96  FRLKDRKNADYLLGPTHEEMFTSVVK--SEYNSYKDFPVILYQVQTKYRDEE 145


>gi|322369853|ref|ZP_08044415.1| prolyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320550189|gb|EFW91841.1| prolyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 485

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/243 (11%), Positives = 63/243 (25%), Gaps = 14/243 (5%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+ ++E    L     +  +               +     T    EA+
Sbjct: 163 WQEGHTAHETEEEAWDETMTRLEQYQRVFEEVLAIPVMPGRKPEHDKFPGADTTTTVEAL 222

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV--PATGFSIGISRLIVAL----KS 364
           +      +       G       YD   +           T + +    L   +      
Sbjct: 223 MPDGKSVQGATSHYLGQGFA-EAYDLYFTDENEDERVAHTTSWGLSWRALGALIMTHSDE 281

Query: 365 LESSTNNIKEMGPVLITTMDHDS---DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                        V+I  +  +    + LS  +   + L  AG+R E+     +N G + 
Sbjct: 282 QGFVCPPTLAPEQVVIVPIWQEENREEVLSYAEGIAEDLEEAGVRVELDDRDERNPGFKF 341

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + +  P+    G  E     + +     G+ +  +  +     E     +   + E 
Sbjct: 342 NEWELKGVPVRFEIGPHEVEDDEITVVHRPDGENVVEDRADIAETVEDHFDAVFDKMYEA 401

Query: 482 VST 484
              
Sbjct: 402 AEE 404


>gi|290893569|ref|ZP_06556552.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290556914|gb|EFD90445.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 568

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   +  K A    + I  +V FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKELEKVATPDQKSIADIVEFLE 271

Query: 246 IDLEKSMHEL 255
           + +EK+M  +
Sbjct: 272 VPIEKTMKSM 281



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQGAGFSVLIDDRAERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 557


>gi|312139298|ref|YP_004006634.1| prolyl-tRNA ligase pros [Rhodococcus equi 103S]
 gi|311888637|emb|CBH47949.1| prolyl-tRNA ligase ProS [Rhodococcus equi 103S]
          Length = 581

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 4/100 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQL 421
                   +      V +   + D  +    +     L  A  R ++     K + G + 
Sbjct: 473 DDKGLRWPSEVSPFDVHLVIANKDDAAREGAEALAAELDKA--RVDVLFDDRKASPGVKF 530

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           K ++    PL ++ G    + G ++++D   G+     + 
Sbjct: 531 KDSELIGVPLVVVVG-RGFAEGNVELRDRFTGESREVPVD 569



 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +  G        +R+   +   +R      G   I  P L   D              G
Sbjct: 36  RIAPGVYSWLPLGLRVLREVERVVREEMNAMGAQEILLPALLPRDPYETSN-RWTEYGAG 94

Query: 70  VFSLQDDDGQWISLRY 85
           +F L+D  G  + L  
Sbjct: 95  LFRLKDRKGNDMMLGP 110


>gi|325673396|ref|ZP_08153087.1| proline--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325555417|gb|EGD25088.1| proline--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 581

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 4/100 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQL 421
                   +      V +   + D  +    +     L  A  R ++     K + G + 
Sbjct: 473 DDKGLRWPSEVSPFDVHLVIANKDDAAREGAEALAAELDKA--RVDVLFDDRKASPGVKF 530

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           K ++    PL ++ G    + G ++++D   G+     + 
Sbjct: 531 KDSELIGVPLVVVVG-RGFAEGNVELRDRFTGESREVPVD 569



 Score = 36.7 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +  G        +R+   +   +R      G   I  P L   D              G
Sbjct: 36  RIAPGVYSWLPLGLRVLREVERVVREEMNAMGAQEILLPALLPRDPYETSN-RWTEYGAG 94

Query: 70  VFSLQDDDGQWISLRY 85
           +F L+D  G  + L  
Sbjct: 95  LFRLKDRKGNDMMLGP 110


>gi|295104458|emb|CBL02002.1| ATP phosphoribosyltransferase [Faecalibacterium prausnitzii SL3/3]
          Length = 531

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 125/388 (32%), Gaps = 53/388 (13%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           +R++YE  G         E      +        ++ V +  D DG+ ++L+ D+T  +A
Sbjct: 18  LRSLYETAGCRKYHMGRFEEYSLYQEN--RSFLSSEQVITFTDLDGRLLALKPDVTLSIA 75

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           +               Y               F++  Q  ++ +G+  E    +   + A
Sbjct: 76  KTA----QPAPGETLRYYYHENVYRPSAESHTFKEISQMGLELLGAVGEAEVQQAVCLAA 131

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
            +L A+G    ++ + +++   L G+ + +G+    +                     + 
Sbjct: 132 QSLAALGA---EWVLEVSHMGYLFGLFDALGVPEAARAQ-------------------LL 169

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKGTIAGEKGFNE 271
             L +            A L+    D +   L +     +       +    A      E
Sbjct: 170 EKLRQKNAHELRAAALSAGLSETAADALCGVLELSGSYAATLSKAAALCRNPAMTAAVAE 229

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L  ++  +   G     I++  T+   +EYY G V++  L                +  G
Sbjct: 230 LTALAPTL---GQAGGSIRLDLTLAGEMEYYNGLVFQGYLKALP----------RPLLKG 276

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           GRYD L+ +F          +IG +  +  L  L +      +    ++  +      L 
Sbjct: 277 GRYDLLLQKFTPGA-----GAIGFAVYLDELDRLNAMPPVQHQDTGKVMLNVALPKGRLG 331

Query: 392 KYQMYTQMLRTAGIRAEM--FLGSSKNF 417
                  +L  AGI  +      +++  
Sbjct: 332 D--KVYNLL--AGIGYDCPEDYNATRKL 355


>gi|291535914|emb|CBL09026.1| prolyl-tRNA synthetase, family II [Roseburia intestinalis M50/1]
          Length = 567

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 57/549 (10%), Positives = 133/549 (24%), Gaps = 101/549 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
               + RI  +I   +R   +      +  P++  + SL +     +   + +    D +
Sbjct: 43  YLPLK-RITRKIEQILREEMDKLDGQEVSFPVVMPA-SLWEESGRYESVGEELLRFTDRN 100

Query: 78  GQWISLRYDLT-----APLARYVAENFDTIVFPCRTYR--------------------IG 112
              + L   +T       L R  A++++   F     +                    + 
Sbjct: 101 NAKMVLG--MTHEEAAVHLVREYAKSYNKYPFMIYQIQTKFRDEARPRAGLIRVREFTMK 158

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH------ 166
             +          + + +C              E+  + +D+    G   +++       
Sbjct: 159 DAYSFHTSQEDLNQYYEKCHKAYERIFERAGIPEVVSVASDSGMMGGSLSHEFMLLTPVG 218

Query: 167 ---IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
              I + N       +E      D   +     L  +   D   ++ +    G+   ++ 
Sbjct: 219 EDSIVLCNECDFRANMEAAENISDIARDAVSAELEKVHTPDIHTIEDICKFFGDETCNSC 278

Query: 224 GDFTKGANLTSEQI------------DIMVSFLSID------------------------ 247
                  N     +              +V++L  +                        
Sbjct: 279 KAVVYQKNSDDTYVVVFIRGDLEINETKLVNYLKDEIHPAIITEECGLNAGYIGPVGLKI 338

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
              ++      ++       G NE     + +       +                 C  
Sbjct: 339 NGDAIVLYDRSLENRNNLSCGANEDEYHYKGLDMQRDVPDAEYHDFAKAYEGGICPKCGK 398

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL----- 362
           + I     + E       G           V +      P  G        + A      
Sbjct: 399 KTIRISRGI-EVGNIFQLGDKYTRAMKMTYVDQNGESKTPIMGCYGIGVGRLAAAVCEAH 457

Query: 363 -KSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                           V +  +  D  +         + L+  GI   ++   + + G  
Sbjct: 458 HDEYGPIWPKSIAPWQVHLCAVRADNEEVRKFADDLYEKLQEIGIEV-IYDDRTVSAGVM 516

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
              AD    PL +I       +G++++                      +  Q  + + E
Sbjct: 517 FSDADLLGIPLRVIVSPRNMKQGVVEV------------------ASRDKTLQTQVKMEE 558

Query: 481 LVSTVKKIL 489
               VKK L
Sbjct: 559 AAEQVKKYL 567


>gi|282881717|ref|ZP_06290380.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304476|gb|EFA96573.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 655

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/461 (10%), Positives = 123/461 (26%), Gaps = 80/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ D +RNI   YG          Y + +   +      +K ++ 
Sbjct: 263 KGLPIWLPKGTELRLRLQDMLRNIQRRYG----------YQEVITPHIG-----SKNLY- 306

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                  G      K          + +
Sbjct: 307 ------------------------------------VTSGHYAHYGKDSFQPIHTPEEDE 330

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +         E+      + + + ++  ++           G + +    G+     
Sbjct: 331 EYMLKPMNCPHHCEVFAYKPRSYKDLPLRIAEF-----------GTVYRYEKSGELHGLT 379

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK                      + +  + +F + + + S+
Sbjct: 380 RVRSFTQDDAHIFCRPDQVKNEFLRVMD------------IIQAVFKIFNFDNFEAQISL 427

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  +  +  I  ++ + E         K      +++       G +     V +AI  
Sbjct: 428 RDPKDK-EKYIGSDEVWAESEQAIIDACKEKGLDAKVEYGEAAFYGPKLD-FMVKDAIGR 485

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              +   Q              D   S+     V    F        V ++         
Sbjct: 486 RWQLGTIQVDYNLPQRFKLEYTDEDNSKRTPVMVHRAPFGSLERFTAVLIEHTAGHFPLW 545

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V I  +       +  +   +      +RA +    ++  G +++  + +  P  
Sbjct: 546 LTPDQVAILPIS--EKYNAYARQVAKQFAAQQVRATID-DRNEKIGRKIRDNELKRVPYM 602

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +I G  E + G++ +++   G++ +  +    +     VAQ
Sbjct: 603 VIVGEKEAADGLVSMRERGGGEQATLRVDEFIARINNEVAQ 643


>gi|160902700|ref|YP_001568281.1| prolyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189083505|sp|A9BGA8|SYP_PETMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160360344|gb|ABX31958.1| prolyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 582

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++  +I   +R   E  G   I  P++  ++ L K     +     +  
Sbjct: 37  SGVYSYLPLGWKVIRKIEQIVREEMEKIGSQEIMLPIIHPAE-LWKMTGRWEDYGPELMK 95

Query: 73  LQDDDGQWISLRY 85
           L+D   +  +L  
Sbjct: 96  LKDRHDREFTLGP 108



 Score = 41.0 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 17/124 (13%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++      +I    +D   +S  Q         GI   +      + G + K  D 
Sbjct: 466 IWPKSVAPFEVAIIPVAMNDEAIVSTSQEIYDYFLKEGIDVIIDDREV-SAGFKFKDIDL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ II G      G +++K   K +    E KN +               EL   VK
Sbjct: 525 IGVPIKIIIGKR-LKEGKIELKQRDKEEGTLIEFKNVK---------------ELYDKVK 568

Query: 487 KILQ 490
           + L+
Sbjct: 569 EKLE 572


>gi|292655832|ref|YP_003535729.1| threonyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291370664|gb|ADE02891.1| threonyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 643

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/368 (9%), Positives = 94/368 (25%), Gaps = 12/368 (3%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                  +   +  ++  +     +       D +  + +   +Y +   N      I +
Sbjct: 283 QLNLDAGYDPVETPHLFRTELWKKSGHYENYVDDMFLLDVNDEEYGLKPMNCPGHATIFD 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D         +   K  +  L G+  +      D         +   ++I+++
Sbjct: 343 QQSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGH--LFVRPDQIEDEINLI 400

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           +  +    +    +    +        G +E+   +E   ++  + + I        G  
Sbjct: 401 IDNILTVFDTFGLDAEVALATRPDKSVGSDEIWEQAETQLRAVLDDSGIDYGIEAGDGAF 460

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG----FSIGIS 356
           Y     + A             V                     + P       +     
Sbjct: 461 YGPKIDF-AFKDALGRKWDGPTVQLDFNMPDRFDLTYTGEDNEDHQPVMIHRALYGSYER 519

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             +V ++              V I  +    D +   +     L     R ++    S  
Sbjct: 520 FFMVLIEHFNGKFPFWLAPEQVRILPIS--DDQIGYAKKLQYEL--NDFRVDIE-DRSWT 574

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            G +++ A     P  +I G  E   G + ++D  + +     ++       +   +   
Sbjct: 575 LGRKIREAQTDRVPYMVIVGGDEEEDGTISVRDRKEREAKDVSVEAFRDHLRSEYDEKRT 634

Query: 477 PISELVST 484
               L   
Sbjct: 635 EPDFLADE 642



 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI + + D  + +  + G+DP+ETP L  ++ L K     +     +F L
Sbjct: 262 GLPLYQPNGKRILDELADYAKQLNLDAGYDPVETPHLFRTE-LWKKSGHYENYVDDMF-L 319

Query: 74  QDDDGQWISLRYDLTAPLA 92
            D + +   L+       A
Sbjct: 320 LDVNDEEYGLKPMNCPGHA 338


>gi|227892831|ref|ZP_04010636.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227865333|gb|EEJ72754.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 645

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 500 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPIQAEIIPVNNEAHGEY 559

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   Q L   G RAE+    ++  G +++ +  +  P  ++ G  E   G + ++    
Sbjct: 560 AEKVRQELAKRGFRAEVD-DRNEKMGYKIRESQTQKVPYTLVLGDDEMKSGKVNVRRYGT 618

Query: 453 GKELSREIKNNESWREA 469
            +E+S+ + +     +A
Sbjct: 619 DEEISKSLDDFIKEIDA 635



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+D + TP+L   D+  K           +F
Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVAD--GYDHVYTPVLMNLDAY-KTSGHWAHYRDDMF 316

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 317 PPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 376

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                +   A++  ++ D  +   I    + +   + K  +       
Sbjct: 377 REMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTEKYFANDE 436

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 437 MWERSQKM 444


>gi|293401596|ref|ZP_06645738.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304854|gb|EFE46101.1| proline--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 563

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 52/521 (9%), Positives = 123/521 (23%), Gaps = 85/521 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK+        G         R+  +I   +R   +  G   +  P+L   +   K  
Sbjct: 31  MIKKSS------SGIYMIMPMGKRVLQKIETIVREEMDATGAQELLMPVLIPEEVYEKS- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +     +F+L+D   +   +     +L             +                
Sbjct: 84  GRREAFGANMFALKDRYQKRYVMGPTHEEL---FTIAATMKGSSYKDFPYNLYQIQTKFR 140

Query: 118 EKHGPGR-------FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
           ++  P         F        D    S   +  +M       +E +G+          
Sbjct: 141 DETRPRYGLIRVREFIMKDAYSFDVDEESMHVSYMKMFHAYKKIMERLGLTYKIVKADTG 200

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
                     +      + +            L+   +                  T  A
Sbjct: 201 AMGGSLSEEFQAITPIGEDVVVGCEHCNFSSNLEITEVVDQASDDTAELRQMEVVKTPDA 260

Query: 231 NLTSEQIDIM----VSFLS--------------IDLEKSMHELY--ELVKGTIAGEKGFN 270
               E           F+               +   + ++E    +L++        F+
Sbjct: 261 KTIEEVAAFFQKAADDFVKTLIYKVDGKTYAFLLKGTRELNETKVLKLLQANEMELADFD 320

Query: 271 ELVVISE----------------LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           E+  ++                 + R+  +  N I  ++     +       +E  +   
Sbjct: 321 EVERVTHAKVGFAGPIGIACPIIMDREVTHMKNFIVGANQTDHHIVNVNVKDFEVSMIAD 380

Query: 315 VMNEKQKPVVFGS---------------------VGGGGRYDGLVSRFKGQNVPATGFSI 353
           +   K+  +                                +      K   V    +  
Sbjct: 381 IAQVKEGDICPVCGHRLTFAKGIEVGNTFKLGTKYAESLGLEYQDETNKLHPVQMGCYGF 440

Query: 354 GISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           G+ R + A+    +         ++      ++     D + +       + L  AGI  
Sbjct: 441 GLGRAMAAIVEQHNDASGIIWPASVAPYQVAIVVVAIKDEEQMRVATALYEELSAAGIDV 500

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +     +  G + K  +    P  I  G      G ++ +
Sbjct: 501 VLDDRKER-PGVKFKDMELIGIPYRITVG-RGAVDGKVEFR 539


>gi|148653933|ref|YP_001281026.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|172048584|sp|A5WHD5|SYT_PSYWF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148573017|gb|ABQ95076.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 644

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 71/257 (27%), Gaps = 6/257 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   A +  E  + +   L +  +    ++   +        G +E   I+E   
Sbjct: 381 DDAHIFCTQAQIQEEVANFIKLTLDVYKDFGFDQIEMKLSTRPEKRVGTDESWDIAEKAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
               +S+ ++       G  Y     +        + +                   +  
Sbjct: 441 ADALDSSGLEWEYLPGEGAFYGPKIEFSLKDSLGRVWQCGTIQVDPNMPERLEAEFVNEN 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             R     +           L + ++                +  M+         Q   
Sbjct: 501 NERETPIMLHRAILGSFERFLGMLIEHYAGWMPVWLAPQQ--VVVMNITDKQADACQNVA 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+ AG+RA   L  ++  G +++       P  ++ G  E   G + ++         
Sbjct: 559 SELQNAGLRAITDL-RNEKIGFKIRERTLERIPYMLVLGDKEVESGQVNVRTREGENLGV 617

Query: 458 REIKNNESWREARVAQI 474
             + +     +  VAQ 
Sbjct: 618 MSVADFIELVQKAVAQK 634



 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R + ++ G+  I+TP +       K        
Sbjct: 255 MQEQSP-GMVFWHPNGWTIYQVLEQYMRKVQKDNGYQEIKTPQIVDRSLWEKS-GHWGNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 ATNMFTTSSES-RDYAVKPMNCPCHVQVFNQGLKSYRELPIRLAEFGSCHRNEPSGSLH 370


>gi|210633121|ref|ZP_03297688.1| hypothetical protein COLSTE_01601 [Collinsella stercoris DSM 13279]
 gi|210159275|gb|EEA90246.1| hypothetical protein COLSTE_01601 [Collinsella stercoris DSM 13279]
          Length = 569

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 41/141 (29%), Gaps = 5/141 (3%)

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK-EMGPVLITTMDHD- 386
             G  +       K   +   G  +  +      +  +         + P  ++ M  D 
Sbjct: 419 AMGATFADENGEEKPFLMGCYGVGVSRTLAASVEQHHDGHGIIWPVSIAPYEVSIMPLDP 478

Query: 387 --SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
              +        T  L  AGI   +     +  G +    D    P  I+ G      G 
Sbjct: 479 TIEECAEVCARLTDELCAAGIEVIVDDRDIR-PGVKFADNDLMGFPYQIVLGKRGLKNGT 537

Query: 445 LQIKDLAKGKELSREIKNNES 465
           +++KD A G+     I    +
Sbjct: 538 VELKDRATGEREDVAIDEVAA 558



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I D +R+  +  G   +  P++  +    +     +     +  +
Sbjct: 38  GLYSYLPLAWRSLRKIEDIVRDEMDAAGAQELLMPIMVDAQV-WRESGRYNAYGPELMRI 96

Query: 74  QDDDGQWISLRY 85
            D   +   L  
Sbjct: 97  DDRHDREFVLGP 108


>gi|33592589|ref|NP_880233.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33596580|ref|NP_884223.1| threonyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|33601133|ref|NP_888693.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81425212|sp|Q7VY64|SYT_BORPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81427196|sp|Q7W912|SYT_BORPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81431262|sp|Q7WKF7|SYT_BORBR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33572235|emb|CAE41786.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33573281|emb|CAE37262.1| threonyl-tRNA synthetase [Bordetella parapertussis]
 gi|33575568|emb|CAE32646.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|332382006|gb|AEE66853.1| threonyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 649

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 41/152 (26%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R +Y++ G+  ++ P +    +L K     D   + +F+ 
Sbjct: 266 GLIFWHPKGWALWQQVEQYMRKVYQDNGYQEVKAPQILDL-TLWKKTGHWDNYRENMFT- 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +   L+        +       +       Y         +              
Sbjct: 324 TESENRVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGF 383

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                     + ++    A     +     D+
Sbjct: 384 TQDDGHIFCTEDQLQDECAAFTALLQKVYKDF 415



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 36/125 (28%), Gaps = 3/125 (2%)

Query: 324 VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTM 383
                 G    D    R     +           + + +++   +          ++  +
Sbjct: 492 SMPVRLGAEYVDQNDQRRPPVMLHRAILGSLERFIGMLIENHAGAMPPWLAPLQAVVCCI 551

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
              S         TQ L+  G R +  L   +    +++    +  P  ++ G  E   G
Sbjct: 552 SEHSA--EYAAQITQSLKKQGFRVQADL-RGEKITRKIREHSLQKIPYLLVVGDKEMQNG 608

Query: 444 MLQIK 448
            + ++
Sbjct: 609 TVAVR 613


>gi|315648987|ref|ZP_07902081.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315275668|gb|EFU39022.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 645

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +   +      +   + L+ AGI  E  L  ++  G +++ A     P   
Sbjct: 544 WLSPVQVKVIPVSNAFEDYAKEVAEKLQFAGISVEPDL-RNEKLGYKIREAQLEKIPYMF 602

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           I G  E++ G + ++   +G   ++ + +        +    +
Sbjct: 603 IVGENEKNAGAVSVRKRGEGDIGAQSLDDIILKLREEINTHVV 645



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/220 (11%), Positives = 58/220 (26%), Gaps = 9/220 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++R  +   I ++ E  G+  + TP+L   +   K     +   + +F  
Sbjct: 265 GLPIWLPNGAKLRRTLERYIVDMEERLGYQHVYTPVLGNVELY-KTSGHWEHYQEDMFPK 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEELVLRPMNCP-------HHMMVYKSDMHSYRDLPIRIAELGMQHRYEMSGALT- 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                 A T +        D ++    +     + +     +     ++         + 
Sbjct: 376 GLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKDFGIHDYRFRLSYRDPQDTEKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                  +   +   + V+ L              G  L 
Sbjct: 436 FQNDEMWEMSQRMLREVVESLDMPFYEAEGEAAFYGPKLD 475


>gi|295109520|emb|CBL23473.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus
           obeum A2-162]
          Length = 653

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 52/163 (31%), Gaps = 4/163 (2%)

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                   ++D       G           S+G     +A    + +      + P  + 
Sbjct: 490 QWDALLAEQFDMYYIDENGDKKRPYIIHRTSMGCYERTLAWLIEKYAGMFPTWLCPEQVR 549

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +       +        ++ AGIR  +    S+  G +++ A     P  ++ G  E  
Sbjct: 550 VIPISEKFNAYADKVEAQMKEAGIRCSVD-RRSEKMGYKIREARLERVPYMLVVGAKEEE 608

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
            G + ++    G E  +++ +  S  +  +   TI   E+   
Sbjct: 609 EGKVSVRSRYLGDEGMKDLGDFMSAIKEEIKNKTIRKIEVQEE 651



 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +   +   I +     G+   +TPL+  SD   K     D    G+F L
Sbjct: 260 GLPLIMPNGVIMMQELQRWIEDEETKRGYVRTKTPLMAKSDLY-KISGHWDHYKDGMFVL 318

Query: 74  QDD--DGQWISLRYDLTAPLARYV--AENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            D+  D +  +LR  +T P   YV  AE       P R      +FRNE  G   
Sbjct: 319 GDEENDKEVFALRP-MTCPFQYYVYKAEQHSYRDLPLRYGETSTLFRNEDSGEMH 372


>gi|217964534|ref|YP_002350212.1| prolyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|254782905|sp|B8DG08|SYP_LISMH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|217333804|gb|ACK39598.1| prolyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307570900|emb|CAR84079.1| proS [Listeria monocytogenes L99]
          Length = 568

 Score = 57.9 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   +  K A    + I  +V FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKELEKVATPDQKSIADIVEFLE 271

Query: 246 IDLEKSMHEL 255
           + +EK+M  +
Sbjct: 272 VPIEKTMKSM 281



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQGAGFSVLIDDRAERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 557


>gi|325274563|ref|ZP_08140621.1| prolyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324100290|gb|EGB98078.1| prolyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 571

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVMRKVEAVVREEMNAAGALEVLMPSIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L+D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRLKDRHQRDFCVGPTHEEVITDLARNELSSYKQLPLNMYQIQTK 138


>gi|322691278|ref|YP_004220848.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456134|dbj|BAJ66756.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 677

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/408 (11%), Positives = 108/408 (26%), Gaps = 44/408 (10%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDVDGNITKPGADYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   LT   +++     +  +                 ++ 
Sbjct: 417 EQMKDELTSLLTFVL-NLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAKES 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +    +       
Sbjct: 476 NLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRP 534

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 535 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 576

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +       + + L    +R E+     + FG +++ A +   P  +I G  + +   +  
Sbjct: 577 EFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSF 635

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           +    G +L+    +                 ++++ +KK +Q N  +
Sbjct: 636 R-FRDGSQLNGVPVDTA-------------REQILTVIKKRVQVNSAD 669


>gi|239618448|ref|YP_002941770.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259516548|sp|C5CI64|SYT_KOSOT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239507279|gb|ACR80766.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 648

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/363 (11%), Positives = 91/363 (25%), Gaps = 18/363 (4%)

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                   +      G     + ++   +              +M        G   +  
Sbjct: 258 FSYEYAPGMPIYHPKGTIVLNELMKFSREVHSKHGYQEVMTPQIMNDVLWHRSGHWDHYR 317

Query: 166 HIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID---------KLDKFGLQGVK--LL 214
                  K       K        L  +   +   D         K+ ++   GV   LL
Sbjct: 318 DNMYFTEKDEQQYAIKPMNCPGHILIYKSRAMSYRDLPLKLFEFGKVHRYERSGVLHGLL 377

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
              G   +            EQ+  ++ F+ +       E    +        G  E+  
Sbjct: 378 RVRGFIQDDAHIFCTREQLKEQLKDVIRFVDMIYTPFGFEYRADLCTRPEDFMGDVEIWD 437

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR- 333
           ++    K    S  ++       G  Y     +           +   +    +      
Sbjct: 438 LATEALKDAIESIGLEYKVNEGDGAFYGPKIDFHV-TDSIGREWQCATIQLDFMMPERFE 496

Query: 334 --YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
             Y G  ++     +        + R    L    +       + PV +  +      + 
Sbjct: 497 LTYVGPDNKEYRPVMIHRAIYGSLDRFFGILIEHYAGAFP-TWLAPVQVVAIPISDKHVD 555

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +     L   G+R ++     K+   +++ A     P  +I G  E+    + ++ L 
Sbjct: 556 YAREVADALAAEGVRVDVD-EKQKSTNYKIREAQLNKIPYMLILGDKEKESETITVR-LR 613

Query: 452 KGK 454
            GK
Sbjct: 614 TGK 616



 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 50/184 (27%), Gaps = 10/184 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   + N ++   R ++  +G+  + TP +   D L       D     ++  
Sbjct: 265 GMPIYHPKGTIVLNELMKFSREVHSKHGYQEVMTPQIMN-DVLWHRSGHWDHYRDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D Q  +++             +         +YR  P+   E     R+ +      
Sbjct: 323 TEKDEQQYAIKPMNCPG-------HILIYKSRAMSYRDLPLKLFEFGKVHRYERSGVLH- 374

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +       D        + L+        +   I      +   +      D   +  
Sbjct: 375 GLLRVRGFIQDDAHIFCTREQLKEQLKDVIRFVDMIYTPFGFEYRADLCTRPEDFMGDVE 434

Query: 194 LIVL 197
           +  L
Sbjct: 435 IWDL 438


>gi|170723171|ref|YP_001750859.1| prolyl-tRNA synthetase [Pseudomonas putida W619]
 gi|226701321|sp|B1JD82|SYP_PSEPW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169761174|gb|ACA74490.1| prolyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 571

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVMRKVEAVVREEMNAAGALEVLMPSIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L+D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRLKDRHQRDFCVGPTHEEVITDLARNELSSYKQLPLNMYQIQTK 138


>gi|295105820|emb|CBL03363.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Gordonibacter
           pamelaeae 7-10-1-b]
          Length = 637

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +                L  AG R E++   ++    ++  A  +  P  +
Sbjct: 540 WLAPVQAAVLPLADRHNEAAHELALKLADAGGRVEVY-DQNEPMRVKIAKAQSQKIPYMV 598

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E   G + +++  +G 
Sbjct: 599 VLGDKEIENGTVSVRERHEGD 619



 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 1/67 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RI   + + +R      G++ + TP +  +D   K         + ++  
Sbjct: 259 GLPLYLPKGARIIRTLQEWLRRDLYTRGYEEVITPHIYNADV-WKTSGHYGFYKENMYFF 317

Query: 74  QDDDGQW 80
           + ++G  
Sbjct: 318 EINEGDD 324


>gi|254166523|ref|ZP_04873377.1| glycyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596411|ref|YP_003483107.1| glycyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624133|gb|EDY36694.1| glycyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534198|gb|ADD08545.1| glycyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 557

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 52/410 (12%), Positives = 108/410 (26%), Gaps = 20/410 (4%)

Query: 83  LRYDLTAP--LARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
           LR + TA      +           P    +IG  FRNE        +  + ++  +   
Sbjct: 157 LRPE-TAQGIFVNFPIMYRLNREKLPLGVAQIGKGFRNEISPRQGLLRLREFNMAEIELF 215

Query: 140 AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
            +  D ++   + D    +  +  +         +   ++     +   K+ + L  L  
Sbjct: 216 VDPYDEDILNNLEDVNLHLLTREGEELNLSPKEAVERKLMNAHIGYYMAKIVKFLDAL-G 274

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
           ID       Q  K  L     D        ++   E +  +      DL++ M      +
Sbjct: 275 IDLNRVRFRQHFKEELAHYSRDTWDCEILLSSGWVE-VTGIADRGDYDLKRHMTYSGRDL 333

Query: 260 KGTIAGEK--------GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                 ++            + ++  + +K       I  S   V G         E   
Sbjct: 334 TAIRRFKEPKKIKIKKLRARMEILGPMFKKDAKKIAEILESMEYVDGNI---EIEIEGKN 390

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                +  +  +    +GG      ++    G +                          
Sbjct: 391 VKIPRDAYEIKIEEEVIGGERFVPHVIEPSFGIDRILYAVLEHSFYEREDTGYKVLKLKP 450

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  +       +  +     +R  GI +  +   S + G +   AD    P 
Sbjct: 451 KIAPIKVAIFPLMAKDGLDAVARDVLNKIREGGITS--YYDDSGSIGRRYARADEIGVPF 508

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
            I           + I++    K+    I       E  V +  +    L
Sbjct: 509 CITVDYESLKDNTVTIRERDSAKQKRVRIDAIPKILEDLVDER-VDFESL 557


>gi|52081397|ref|YP_080188.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786773|ref|YP_092602.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647305|ref|ZP_08001527.1| threonyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
 gi|52004608|gb|AAU24550.1| threonyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349275|gb|AAU41909.1| ThrS [Bacillus licheniformis ATCC 14580]
 gi|317390652|gb|EFV71457.1| threonyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
          Length = 643

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 69/228 (30%), Gaps = 9/228 (3%)

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++  +  D     +      +     EK +++  + ++         + I        G
Sbjct: 406 RLIQDVYEDFGLEEYSFRLSYRDPEDTEKYYDDDEMWNKAQSMLKEAMDEIGHDYYEAEG 465

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-----SI 353
              + G   +  +   +  E+    V        ++D       G+            S 
Sbjct: 466 EAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPEKFDLTYVGEDGKPHRPVVIHRGVVST 525

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               +   ++  + +           +  +   S  L   +   + L+  G+R E+    
Sbjct: 526 MERFVAFLIEEHKGALPTWLAPVQFQVIPVSP-SVHLDYAKKVQERLQREGLRVEVD-TR 583

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +  G +++ A  +  P  ++ G  E     + ++    G++ S  + 
Sbjct: 584 DEKIGYKIREAQMQKIPYMLVVGDQEVENEAVNVR--KYGEQKSETVA 629



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 60/229 (26%), Gaps = 9/229 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G++ + TP+L   D         D    G+F  
Sbjct: 265 GLPLWLPKGATIRRVIERYIVDKELALGYEHVYTPVLGSKDLYETS-GHWDHYQDGMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNETLVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAELGTMHRYEMSGALS- 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                   T +     +  D ++   I+       +     L+    ++     +   + 
Sbjct: 376 GLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYEDFGLEEYSFRLSYRDPEDTEKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                  +K      + +  +  +           G  L  +    +  
Sbjct: 436 YDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDVQVKTAIGK 484


>gi|312864463|ref|ZP_07724694.1| threonine--tRNA ligase [Streptococcus downei F0415]
 gi|311099590|gb|EFQ57803.1| threonine--tRNA ligase [Streptococcus downei F0415]
          Length = 651

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 46/125 (36%), Gaps = 2/125 (1%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
                 +++ + +         V +  + +++ +        + LR  G+R ++    ++
Sbjct: 526 RFTAYLIETYKGAFPTWLAPHQVTVIPVSNEAHA-DYAWEVAKELRNHGVRVDVD-ERNE 583

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               +++ +     P  +I G  E +   + ++     +  +  +       +A +A+ +
Sbjct: 584 KMQYKIRQSQTHKIPYQLIVGDKEMADKSVNVRRYGSKQTHTESLNEFVDNIQADIARKS 643

Query: 476 IPISE 480
            P  E
Sbjct: 644 RPAEE 648



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 48/186 (25%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G+  + TP +   D   K     D   + +F  
Sbjct: 262 GLPFWLPDGATIRRTIERYITDREVASGYQHVYTPPIASVDLY-KTSGHWDHYREDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+   LR        +    +  +    P R   +G + R EK          R 
Sbjct: 321 MDMGDGEAFVLRPMNCPHHIQVYKNHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          E    +   ++ D  E   I    + +   +        +   + 
Sbjct: 381 MTLNDGHTFVALDQVEDEFKQTLQLIIDVYEDFNITDYSFRLSYRDPADTHKYFDDDEMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 EKSQRM 446


>gi|300863511|ref|ZP_07108463.1| threonyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300338467|emb|CBN53605.1| threonyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 608

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +   +D L   Q     +R  GIRAE  + S +  G  ++ A++   P+  
Sbjct: 506 WLAPIQVRLLPVSNDFLPFAQEVAAKMRILGIRAEADVSSER-LGKLIRNAEKDKIPVMG 564

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           I G  E     L I+  A G+
Sbjct: 565 IVGAKEVESNSLSIRTRASGE 585



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ + D ++      G+ P+ TP +   D   K      +  + +F +
Sbjct: 222 GLPLWTPKGTILRSILEDFLKQEQVKRGYLPVVTPHIGRVDLF-KTSGHWQKYKEDMFPM 280

Query: 74  QDDDGQW 80
             +D + 
Sbjct: 281 MAEDEES 287


>gi|255027702|ref|ZP_05299688.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 204

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 43/106 (40%), Gaps = 2/106 (1%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             +   ++  + +         + I  ++ D+  L   +     L+ AG+RAE+    ++
Sbjct: 88  RFVAYLIEEYKGAFPTWLAPVQMEIIPVNADA-HLDYAKGVQDKLQRAGLRAEVD-DRNE 145

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             G +++ A  +  P A++ G  E   G + ++        + ++ 
Sbjct: 146 KLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLD 191


>gi|47096944|ref|ZP_00234521.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|47014704|gb|EAL05660.1| prolyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
          Length = 502

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 79/256 (30%), Gaps = 6/256 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   D  K A    + I  +V FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKDLEKVATPDQKSITDIVEFLE 271

Query: 246 IDLEKSMHELYELVKG 261
           + +EK+M  +   V  
Sbjct: 272 VPIEKTMKSMLYQVDD 287


>gi|329905673|ref|ZP_08274169.1| Prolyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547550|gb|EGF32358.1| Prolyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 578

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/151 (10%), Positives = 49/151 (32%), Gaps = 6/151 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R      G   +  P+++ ++ L +        
Sbjct: 31  MIKRLGSGIYTYMPMGLRVIRKVEAIVREEMNRAGAVELLMPVVQPAE-LWQETGRWQEY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D  G+   ++    ++   +AR   +++  +      Y +   FR+E+    
Sbjct: 90  GAELMRVKDRHGRDFIIQPTSEEVITDIARTEIKSYRQLP--VNFYHVQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADT 154
              +  +  + +  S                
Sbjct: 148 GLMRGREFTMKDAYSFDRDPAGMKQSYQIMF 178


>gi|94495624|ref|ZP_01302204.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94425012|gb|EAT10033.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 665

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/459 (10%), Positives = 121/459 (26%), Gaps = 69/459 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R   ++ G+  ++TP +  +    +      +  + +F +
Sbjct: 271 GSVFWHPKGYVIWRNLEAYMRRAIDDAGYREVKTPQVMDARQ-WEQSGHWGKYRENMFVI 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D+                                    P   +E         ++    
Sbjct: 330 PDE-----------------------------------VPNVEDEGPLVSDDADWMA--- 351

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +      A   +      +   + ++   Y  G  +R    G L  +      +  + 
Sbjct: 352 --LKPMNCPAHVLIFRQGIKSYRDLPLRF--YENGCCHRNEPHGALHGLMRV--RQFTQD 405

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +      ++    L      D    ++    L  E+            E+   
Sbjct: 406 DAHIFCREDQIVEEVRAFCALADRIYKDFGFTYSIKLALRPEKR--------FGTEEMWD 457

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  E ++  +A       L        +                            I   
Sbjct: 458 KAEEELRNAVAA----AGLNTPDYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSD 513

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            V+ E+      G  G            +   +    F      + + ++          
Sbjct: 514 RVLPERLDASYIGEDGER---------HRPVMLHRAIFGSYERFIGILIEHYAGKFPLWL 564

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                ++ T+  D+D  +K       LR AGIRAE+    ++    +++       P  +
Sbjct: 565 APVQAVVATIVSDADDYAKA--TVDRLRAAGIRAELD-TRNEKINYKVREHSLAKVPNLL 621

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E   G + +++L K  +    + +  +  E   +
Sbjct: 622 VVGRREADEGTVALRELGKDGQSVLSLDDVIARLEKEAS 660


>gi|116754480|ref|YP_843598.1| threonyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694718|sp|A0B8D4|SYT_METTP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116665931|gb|ABK14958.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methanosaeta
           thermophila PT]
          Length = 619

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 63/231 (27%), Gaps = 12/231 (5%)

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D E ++    +  +      +G   LV I +          R                  
Sbjct: 378 DYEVAIRFTKDFYENNKTFIEG---LVDIVDKPVLIEMWDERFFYFVLKFEFNFVDALDK 434

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
             A+    +  E  +    G V   G     +      +         +      + +  
Sbjct: 435 ASALSTVQIDVENAERYDIGYVDAEGNRQRPIILHCSPSGAIERLMYALLEKQAMIAANG 494

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                   + P  +  +       ++     + L     R ++     +  G +++ A R
Sbjct: 495 GLPMLPTWLSPTQVRIIPVAERHHARAMEVAEQL---NFRVDVD-DRDETVGKKIRDAGR 550

Query: 427 RNCPLAIIQGTGERSRG--MLQIKDLAKGKELSREIKNNESWREARVAQIT 475
              P   + G  E S G   + ++  +   +   +IK +     AR+   T
Sbjct: 551 EWVPYVAVVGDEELSTGLLTVTVRSESTSNQ---KIKMSVEELRARLQSET 598


>gi|225424719|ref|XP_002265302.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296086530|emb|CBI32119.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/138 (10%), Positives = 43/138 (31%), Gaps = 3/138 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +    R +   +             + L+  +            ++  +     S     
Sbjct: 549 EDEAKRERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS--EKSQPYAL 606

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                +  AG   ++   + +    +++ A        ++ G  E + G + ++   KG 
Sbjct: 607 KVRDQIHQAGYYVDVD-TTDRKIQKKVREAQLAQYNYILVVGEEEANTGQVSVRVRDKGD 665

Query: 455 ELSREIKNNESWREARVA 472
                ++N  S+ ++ +A
Sbjct: 666 HSVMSMENLLSFFKSEIA 683



 Score = 37.5 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N++++ I+  Y   G+  + +P + Y+  L +         + +F  + + 
Sbjct: 316 FLPHGGRIYNKLMEFIKAQYRERGYHEVFSPTM-YNMQLWETSGHAANYKENMFVFEVEK 374

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 375 -QEFGLKPMNCPG 386


>gi|170727590|ref|YP_001761616.1| prolyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|226701338|sp|B1KNR3|SYP_SHEWM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169812937|gb|ACA87521.1| prolyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 569

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  +I   +R      G   I  P+++ +D L       ++ 
Sbjct: 31  MIRRNASGLYSWLPTGLRVLRKIEAIVREEMNKAGSVEILMPMVQPAD-LWVETGRFEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +   QD   +   L     ++   + R    ++  +      ++I   FR+E     
Sbjct: 90  GPELLRFQDRHNRDFVLGPTHEEVITDIVRKEVNSYKQLP--LNLFQIQTKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GVMRSREFLMKDAYSFH 164



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 30/109 (27%), Gaps = 3/109 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       +   +   + L  AGI         +  G  
Sbjct: 460 DDRGIIWPDAIAPFRVGILPMNMHKSHRVQDMAEQLYKDLSDAGIEVLFDDRKERA-GVM 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               +    P  ++ G      G+ + K+   G++          + ++
Sbjct: 519 FADMELIGLPHVVVIGDRNIDAGVFEYKNRRTGEKQEVPFDQIVEFLKS 567


>gi|114706249|ref|ZP_01439151.1| threonyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114538110|gb|EAU41232.1| threonyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 670

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/392 (11%), Positives = 106/392 (27%), Gaps = 13/392 (3%)

Query: 98  NFDTIVFPCRTY-RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
           +             +              +   +   +  G      +    +  A    
Sbjct: 270 HSKGWRMFQSLVSYMRRRLDGTYEEVNAPQILDKALWETSGHWGWYQENMFAVKSAHAFT 329

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
                  D+ +         G ++             +      +         +  L+ 
Sbjct: 330 RPDDAEADHRVFAIKPMNCPGHVQIFKHGLKSYRELPIRYAEFGNVHRYEPSGALHGLMR 389

Query: 217 E--GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFN 270
                 D++  F     L +E + I    LSI  +    E+   +          ++ ++
Sbjct: 390 VRGFTQDDAHVFCTEEQLAAECLRINDLILSIYADFGFEEIVVKLSTRPEKRVGSDENWD 449

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
               I   V K     +  KI ++I+ G   + G  +E  L   +  E Q          
Sbjct: 450 HAEAIMGDVLKEIEAKSGGKIRTSILEGEGAFYGPKFEYTLRDAIGREWQCGTTQVDFNL 509

Query: 331 GGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
             R+         +              + R +  L    +    +  +    +      
Sbjct: 510 PERFGAFYIDENSEKKRPVMIHRAICGSMERFLGILLENYAGHMPLWFVPQQAV-VATIT 568

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           S++    +  T++LR AG++ E  L  ++    +++       P+ I+ G  E     + 
Sbjct: 569 SEADDYAREVTEVLRDAGLKVETDL-RNEKINYKVREHSLAKVPVIIVCGRREAEERAVN 627

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPI 478
           I+ L    + +  ++       A      +  
Sbjct: 628 IRRLGSKDQTAMGLEEAVQTLAAEAMPPDVKR 659


>gi|30020454|ref|NP_832085.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229127762|ref|ZP_04256751.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|29896005|gb|AAP09286.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228655839|gb|EEL11688.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 640

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 66/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYANEIALKLAQAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S  I 
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVIA 623



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|189345705|ref|YP_001942234.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|238692169|sp|B3EEC1|SYT_CHLL2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189339852|gb|ACD89255.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 657

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 19/118 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    +     +     L  AGIR E+    ++  G +++ A+    P  I
Sbjct: 557 WLAPVQAVVLPIAEEVHDYAKTIHTALLAAGIRVEID-TRNEKIGRKIREAEIGKIPCMI 615

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           I G  ER  G + ++    G                 +   T+P   L+  +KK + E
Sbjct: 616 IVGQKERDSGEISLRRHRSGD----------------MGSFTVP--GLIDILKKEISE 655



 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 31/269 (11%), Positives = 73/269 (27%), Gaps = 12/269 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP----D 62
           L  E+  G      K   IR+ +   ++      G+ P+ TP +   +   +        
Sbjct: 266 LSPEIGSGLPVWLPKGAVIRSELETFLKEEQRKRGYLPVYTPHIGNIELYKRSGHYPYYS 325

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           + +     +  +D   +   L+             +        R+YR  P+   E    
Sbjct: 326 DSQFPPLTYHDEDGKQEQYLLKPMNCP-------HHHLIYSSKLRSYRDLPIRLTEFGTV 378

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            R  Q  + +   V +   T D        + L        D    +        +  ++
Sbjct: 379 YRHEQSGELN-GLVRARGFTQDDSHIYCTPEQLVDEICNAIDLTQFVFGTLGFSEVQTRL 437

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +H      +        ++ +K   +    +  +           G  +     D +  
Sbjct: 438 SMHDPANQQKYGGTAEIWEQAEKDVREAADRMGIDYFIGVGEASFYGPKIDFIVRDALGR 497

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNE 271
              +   +  + + E    +  G  G   
Sbjct: 498 KWQLGTVQVDYVMPERFDLSYIGSDGQKH 526


>gi|312198148|ref|YP_004018209.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311229484|gb|ADP82339.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 411

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G          +R+ + + IR +    G+  + +P+L   +   +        +  +F  
Sbjct: 23 GLPYWLPDGATVRHTLEEYIRAVERRAGYQHVYSPVLGKRELY-EISGHWSHYSDDMFPP 81

Query: 74 QDDDGQWISLRYDLTA 89
           D  G+ + LR  L  
Sbjct: 82 MDLGGEQVVLRPSLCP 97


>gi|239621470|ref|ZP_04664501.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|239515931|gb|EEQ55798.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
          Length = 686

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/408 (11%), Positives = 108/408 (26%), Gaps = 44/408 (10%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 306 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLK 365

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 366 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 425

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   LT   +++     +  +                 ++ 
Sbjct: 426 EQMKDELTSLLTFVL-NLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAKES 484

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +    +       
Sbjct: 485 NLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRP 543

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 544 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 585

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +       + + L    +R E+     + FG +++ A +   P  +I G  + +   +  
Sbjct: 586 EFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSF 644

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           +    G +L+    +                 ++++ +KK +Q N  +
Sbjct: 645 R-FRDGSQLNGVPVDTA-------------REQILTVIKKRVQVNSAD 678


>gi|163857146|ref|YP_001631444.1| threonyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|229557977|sp|A9IRH6|SYT_BORPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|163260874|emb|CAP43176.1| thrS [Bordetella petrii]
          Length = 650

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/156 (10%), Positives = 41/156 (26%), Gaps = 4/156 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   +  ++   +R +Y + G+  ++ P +   D  L K     D   + +F+
Sbjct: 266 GLIFWHPKGWALWQQVEQYMRAVYNDNGYQEVKAPQI--LDLSLWKKTGHWDNYRENMFT 323

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + + +   L+        +       +       Y         +             
Sbjct: 324 -TESENRVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRG 382

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
                      + ++    AD    +     D+   
Sbjct: 383 FTQDDGHIFCTEDQLQDECADFTALLQKVYRDFGFH 418



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/231 (12%), Positives = 64/231 (27%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F     L  E  D       +  +   HE+   V        G +++   +E   
Sbjct: 386 DDGHIFCTEDQLQDECADFTALLQKVYRDFGFHEVLYKVATRPEKRIGSDDIWDKAETAL 445

Query: 281 KSGYNSNRIKISSTIVRGLEYY---TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                    +   +   G  Y       + +AI         Q         G    D  
Sbjct: 446 MESLRRTGCEFEISPGEGAFYGPKIEYTLKDAIGRHWQCGTVQVDFSMPVRLGAEYVDAQ 505

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             R     +           + + +++   +          ++  +   S         T
Sbjct: 506 DQRRAPVMLHRAILGSLERFIGMLIENHAGAMPPWLAPVQAVVCCISEPSA--DYAAQIT 563

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           Q L+  G R +  L   +    +++    +  P  ++ G  E+  G + ++
Sbjct: 564 QTLKKQGFRVQSDL-RGEKITRKIREHSLQKVPYILVVGDKEKQNGTVAVR 613


>gi|160943589|ref|ZP_02090821.1| hypothetical protein FAEPRAM212_01081 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445044|gb|EDP22047.1| hypothetical protein FAEPRAM212_01081 [Faecalibacterium prausnitzii
           M21/2]
          Length = 531

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 55/386 (14%), Positives = 122/386 (31%), Gaps = 49/386 (12%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           +R++YE  G         E      +        ++ V +  D DG+ ++L+ D+T  +A
Sbjct: 18  LRSLYETAGCRKYHMGRFEEYSLYQEN--RSFLSSEQVITFTDLDGRLLALKPDVTLSIA 75

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           +               Y               F++  Q  ++ +G+  +    +   + A
Sbjct: 76  KTA----QPAPGETLRYYYHENVYRPSAESHTFKEISQMGLEMLGAVGKAEVQQAVCLAA 131

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
            +L A+G    ++ + +++   L G+ + +G+    +                     + 
Sbjct: 132 QSLAALGA---EWVLEVSHMGYLFGLFDALGVPEAARAQ-------------------LL 169

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKGTIAGEKGFNE 271
             L +            A L+    D +   L +     +       +    A      E
Sbjct: 170 EKLRQKNAHELRAAVLSAGLSETAADALCGVLELSGGYAATLSKAAALCRNPAMTAAVAE 229

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L  ++  +   G     I++  T+   +EYY G V++  L                +  G
Sbjct: 230 LTALAPTL---GQAGGSIRLDLTLAGEMEYYNGLVFQGYLKALP----------RPLLKG 276

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           GRYD L+ +F          +IG +  +  L  L +      +    ++  +      L 
Sbjct: 277 GRYDLLLQKFTPGA-----GAIGFAVYLDELDRLNAMPPVQHQDTGKVMLNVALPKGRLG 331

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNF 417
                  +L   G        +++  
Sbjct: 332 D--KVYNLLAGIGYGCPEDYNATRKL 355


>gi|315222497|ref|ZP_07864386.1| threonyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188183|gb|EFU21909.1| threonyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 650

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/333 (10%), Positives = 84/333 (25%), Gaps = 25/333 (7%)

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
             E +    F      D +            + +          +      +G+ +R   
Sbjct: 309 HWEHYQEDMFPPMDMGDGEQFVLRPMNCPHHIEVYKNHVHSYRELPIRIAELGMMHRFEK 368

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
            G L  +      ++      L  + +  +   + V  L+ +   D +            
Sbjct: 369 SGALSGLQRV--REMTLNDSHLFVMPEQIQEEFKHVLDLMIDVYKDFN---ITDYRFRLS 423

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
             D        D ++       ++KG        ++L    +     G  +         
Sbjct: 424 YRDPNDKHKYFDNDEMWENAQRMLKG------AMDDL--GLDYFEAEGEAAFYGPKLDVQ 475

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
           V+        +    L F +                  Y G         +   G    +
Sbjct: 476 VKTALGNEETLSTIQLDFLLPERFDL-----------HYIGADGEEHRPVMIHRGIVSTM 524

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R I  L                +      +           + LR  G+R ++    ++
Sbjct: 525 ERFIAYLIETYKGAFPTWLAPHQVTVIPISNEAHADYAWKVAKELRNRGVRVDVD-ERNE 583

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +++ +     P  +I G  E++ G + ++
Sbjct: 584 KMQYKIRQSQTHKVPYQLIVGDKEQADGTVNVR 616



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 24/77 (31%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +   N G+  + TP L   D   K     +   + +F  
Sbjct: 262 GLPFWLPDGATIRRIVERYITDREVNDGYQHVYTPPLASVDLY-KTSGHWEHYQEDMFPP 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEQFVLRPMNCP 337


>gi|237749052|ref|ZP_04579532.1| prolyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380414|gb|EEO30505.1| prolyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 587

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 51/134 (38%), Gaps = 6/134 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+ ++I + IR      G   +  PL++ ++ L +      + 
Sbjct: 39  MIRRLGSGIYAYMPMGLRVIHKIENIIREEMNRAGAVELLMPLVQPAE-LWQETGRWQKY 97

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   +   ++    ++   +AR V +++  +      Y I   FR+E+    
Sbjct: 98  GPELLRIKDRHDRDFIIQPTSEEVITDIARNVIKSYRQLP--INFYHIQTKFRDERRPRF 155

Query: 124 RFRQFIQCDVDNVG 137
              +  +  + +  
Sbjct: 156 GLMRGREFTMKDAY 169


>gi|297202727|ref|ZP_06920124.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197713306|gb|EDY57340.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 567

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 2/100 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      +  +      ++ LR AG+R  +   +  + G +  
Sbjct: 463 DDKGLCWPAEVAPADVHVVAAGK-ALQIELALDVSEKLREAGLRVLVDDRAGVSPGVKFT 521

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            ++    P  ++ G    + G+L++KD   G+     +  
Sbjct: 522 DSELIGVPKILVAGRRS-AEGVLELKDRRTGEREELTVDE 560



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++   +   +R   +  G   +  P +   +         D     +F LQD  
Sbjct: 48  WLPLGKKVLANVERIVREEMDAIGAQEVLLPAILPREPYEA-TGRWDEYGPELFRLQDRK 106

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 107 GGDYLLGP 114


>gi|118590019|ref|ZP_01547423.1| prolyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118437516|gb|EAV44153.1| prolyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 442

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 43/155 (27%), Gaps = 8/155 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++  +I   +       G   +  P ++ +D L +     D   K +  +
Sbjct: 38  GIYSWLPLGLKVLRKIERIVEEEQARAGAIQLLMPTIQSAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
            D   + +       ++   + R    ++  +       +                  F 
Sbjct: 97  TDRHERDMLFGPTNEEMITDIFRGYVRSYKDLPLNLYHIQWKFRDEVRPRFGVMRGREFL 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  D    SA  A   M +    T   +G+K
Sbjct: 157 MKDAYSFDLDKESARHAYNRMFVAYLRTFARMGLK 191


>gi|48478186|ref|YP_023892.1| glycyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48430834|gb|AAT43699.1| glycyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 474

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/464 (10%), Positives = 126/464 (27%), Gaps = 25/464 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  D     + +++ I++  +  Y + G   I+TP +   +                  
Sbjct: 28  SGLYDYGPLGVLLKDNIINKWKKAYLDEGAIFIDTPNITPGEVFDASGHLS--------R 79

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             D     I+   D      ++  EN           +      +               
Sbjct: 80  FSD-----IAAECDSCKS--KFKIENVLAFNKIEIIPKSVDEALSISEKNNLKCPVCGNI 132

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  + +       E          A GI  N   +    R  L   + ++G    ++++ 
Sbjct: 133 IKKIYNYNLMFRLENSNFYLRPETAQGIFVNFKLLSNYYRGKLPMAVAQLGKGFRNEISP 192

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTD--NSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
           R  ++R  +   +  ++       E   D  +  + T   N   E    + +     +  
Sbjct: 193 RQSLIRLREF-SQGEVEVFFDPENEYWKDLFDYDEITLKPNTGVEYKTSIKNAFENRIID 251

Query: 251 SMHELYELVKG----TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           ++   Y ++K        G K  N      +   ++ Y S+     + I        G  
Sbjct: 252 NIAMAYFILKTQKILNDIGFKNDNIRFRQHDPDERAHYASDSWDAEARIDDDWVEIVGIA 311

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
                     + K    +   +        ++    G +       +          ++ 
Sbjct: 312 NRTNYDLKNHDAKSSERMSLKINNRDVIPNVIEPSYGIDRITLALMVQSYHKNEKGYNVL 371

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           S    +       +  +    + + K      M+ +  I + ++   + + G +    D 
Sbjct: 372 SFKPEMAPY-HFAVLPLIKKENFIKKSMEIYNMIMS--IDSYVYYDETGSIGKRYSRQDE 428

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              P  I           + ++    G +   + K+   +   +
Sbjct: 429 IGTPFCITIDYETLENDSVTVRFRDTGNQERIDKKDLLDYLSGK 472


>gi|254828679|ref|ZP_05233366.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254829924|ref|ZP_05234579.1| prolyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254898516|ref|ZP_05258440.1| prolyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254911993|ref|ZP_05262005.1| prolyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936320|ref|ZP_05268017.1| prolyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284801704|ref|YP_003413569.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284994846|ref|YP_003416614.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|258601083|gb|EEW14408.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258608910|gb|EEW21518.1| prolyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284057266|gb|ADB68207.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060313|gb|ADB71252.1| prolyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|293589957|gb|EFF98291.1| prolyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 568

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 79/256 (30%), Gaps = 6/256 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   D  K A    + I  +V FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKDLEKVATPDQKSITDIVEFLE 271

Query: 246 IDLEKSMHELYELVKG 261
           + +EK+M  +   V  
Sbjct: 272 VPIEKTMKSMLYQVDD 287



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDRAERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 557


>gi|156053914|ref|XP_001592883.1| hypothetical protein SS1G_05805 [Sclerotinia sclerotiorum 1980]
 gi|154703585|gb|EDO03324.1| hypothetical protein SS1G_05805 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 536

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/450 (9%), Positives = 110/450 (24%), Gaps = 71/450 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+   + + +   Y ++GF+ + TP + Y  SL +     +   + ++S+
Sbjct: 83  GSPLFLPKGARMFKALTEFLSAQYSHFGFEEVITPTI-YKKSLWEKSGHWENYAEDMYSV 141

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                                          G     Q  + + 
Sbjct: 142 IGRG-----------------------------------------ASGETVEGQKGENEE 160

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +          +      +   + I+  D+     +R  + G L  +           
Sbjct: 161 YGLKPMNCPGHCLIFASKQRSYREMPIRYTDFSP--LHRNEISGALSGLTR--------- 209

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      D         +K  + +        +     L      ++ +  S     +  
Sbjct: 210 VRRFHQDDGHIFCRPSQIKEEISKTLEFVKMTY-STLGLGMNYRLVLSTRPSDHYIGTKE 268

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILG 312
           E     K              ++E           I +  +  +  +  T    ++    
Sbjct: 269 EWDNAEKALKQSLDNSGREWTMNEGDGAFYGPKIDIILKDSDGKEHQTATIQLDFQLPKR 328

Query: 313 FPVMNEKQKPV--VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           F +  +   P     G +                 +           + + ++       
Sbjct: 329 FELEYQAPAPEIEAKGEITHDPILLAKQGPVTPVLIHRAILGSVERMMALLIEHYNGRWP 388

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQML----------RTAG---IRAEMFLGSSKNF 417
                  V I T++     +   ++  + L          R+     I  E+   S ++ 
Sbjct: 389 FWLNPSKVTILTVNDSEVVVKYAKVVKKQLAHHSHHNLFPRSRHAVEIPIELD-DSPRSL 447

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
             ++  A R+     I+ G        + +
Sbjct: 448 KKKISEAKRKRYGAIIVIGNQNVDDKTVTV 477


>gi|147678291|ref|YP_001212506.1| threonyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146274388|dbj|BAF60137.1| threonyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 640

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN +    R  ++  G+  I TP++  S +L +     +   + ++  
Sbjct: 266 GFPFFHPKGMILRNELEKFWREEHQKRGYQEIRTPVI-LSRNLWERSGHWEHYRENMY-F 323

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 324 TRIDDGDYAVKPMNCPG 340



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     L  AGIRAE+    ++  G +++ A  +  P  +
Sbjct: 539 WLAPVQVRVLPIADRHAGYARKVLDCLTGAGIRAELD-ARNEKIGYKIREAQAQKIPYML 597

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E   G + ++    G 
Sbjct: 598 VTGDKEAENGTVAVRHRTTGD 618


>gi|293374695|ref|ZP_06621003.1| proline--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325840610|ref|ZP_08167091.1| proline--tRNA ligase [Turicibacter sp. HGF1]
 gi|292646609|gb|EFF64611.1| proline--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325490259|gb|EGC92592.1| proline--tRNA ligase [Turicibacter sp. HGF1]
          Length = 420

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 39/153 (25%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ N +   +R+  +  G + +  P L+  + L       D     +  L
Sbjct: 38  GVYTYLPLAKRVLNNVEGIVRDELDAIGGNELLMPALQPKE-LWDESGRWDVYGSELMRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
            D + +  +L     ++   + R    ++  +       +                  F 
Sbjct: 97  TDRNNREFALGPTHEEVITHVVRDFLNSYKKLPLTVYQIQTKFRDEARPRFGLMRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                       S + A         +     G
Sbjct: 157 MKDAYSFHATQESLDEAYNNFVKAYTNIFTRCG 189



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 36/104 (34%), Gaps = 2/104 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I      ++      +D L   +     L+ AG    +     +  G +   AD 
Sbjct: 314 IWPKGIAPFDIHVVPVDVKKADQLEAAENIYAELKAAGFEVLLDDRKERA-GVKFSDADL 372

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              P+ I  G    + G++++K    G+     + +  ++ + +
Sbjct: 373 IGLPIRITVG-RGIADGIVEVKVRQTGEVAEVAVADLMTFVKEK 415


>gi|50555740|ref|XP_505278.1| YALI0F11231p [Yarrowia lipolytica]
 gi|49651148|emb|CAG78085.1| YALI0F11231p [Yarrowia lipolytica]
          Length = 755

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 62/233 (26%), Gaps = 18/233 (7%)

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPV 315
           E+     A ++    L         +  +         IV     +         L F +
Sbjct: 527 EIETWNDAEKQLEEALNKWGANWELNPGDGAFYGPKIDIVISDALHRWHQCATIQLDFQL 586

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
            N         +  G G  D      +   +    +        +  +            
Sbjct: 587 PNRFDLNFKNSAAMGEGEADSAALYTRPVMIHRAIYGSFERMTAILCEHFAGKWPFWLSP 646

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
               +  +          Q     L  AG  A++  G +     +++ A  +      I 
Sbjct: 647 RQ--VLVIPVGPKYNDYAQEVRDELVDAGFFADVDNGPN-TLQKKVREAQLKQYNFTFIV 703

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           G  E++   + I+D                 +  +    +IP+ E++S + K+
Sbjct: 704 GEEEKTAKSVNIRDRDD--------------QSKQAKAASIPLDEVISRLHKL 742



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI + + D +R  Y   G++ + TP + Y+  L +           +F+ + + 
Sbjct: 364 WLPHGARIYSALTDLLRKEYRKRGYEEVITPNM-YNSKLWETSGHWQNYKDDMFTFEIEK 422

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 423 -EKFGLKPMNCPG 434


>gi|307354084|ref|YP_003895135.1| threonyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157317|gb|ADN36697.1| threonyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 610

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/366 (10%), Positives = 97/366 (26%), Gaps = 28/366 (7%)

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +  +   +      A  E      +          +  +       +  I+  + +  + 
Sbjct: 243 MPVETPVMYDLDNHAINEHAGKFGERQYRFKSGNRNMMLRFAACFGMFSIMHDMHISPNT 302

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              +   +     + ++ G       L      +        N T E  +  +       
Sbjct: 303 LPMKMYELSTYSFRHEQKGECIGLKRLRAFTMPDMHSMCLDMNQTLECFEEQLMMGWQTG 362

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +   + L  + + T    K   E V      +    +   + I +   R   +       
Sbjct: 363 KDLEYPLAAVFRCTEDFYKDHEEWVK-----KIVRMSEVPVLIETLSDRVHYWIAKIDLA 417

Query: 309 AILGFPVMNEKQ---KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK-- 363
           AI G     E       V          Y       +   +  +        +   L+  
Sbjct: 418 AIDGQGRPIENPTVQIDVESAERFDIKYYSVRNEEVRPPIIHCSPTGSIERVICALLENT 477

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           + +        + P  +  +   S          + +  AG+R +      ++ G +++ 
Sbjct: 478 ASQEVPMLPVWLSPTQVRILPVSSKHTEYAGELCKKINGAGVRCDFDDRE-ESVGKKIRE 536

Query: 424 ADRRNCPLAIIQGTGERSRGM--LQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           A     P  ++ G  E   G   + I+ ++               +     +  +   +L
Sbjct: 537 AGMDWVPYVVVVGDSEIESGKLPVTIRSMS---------------KPKAPYKEEMTAEDL 581

Query: 482 VSTVKK 487
           +S VK+
Sbjct: 582 ISKVKE 587



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 56/212 (26%), Gaps = 24/212 (11%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   IR+ + D +  +  NYG  P+ETP++   D+         +  +  +  +   
Sbjct: 218 WMPKGKIIRDLLSDYVLGLVLNYGGMPVETPVMYDLDN-HAINEHAGKFGERQYRFK-SG 275

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + + LR+                            +            +  +    +  
Sbjct: 276 NRNMMLRF-------------------AACFGMFSIMHDMHISPNTLPMKMYELSTYSFR 316

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
              +     +  + A T+  +     D        +  +  L      G D       V 
Sbjct: 317 HEQKGECIGLKRLRAFTMPDMHSMCLD---MNQTLECFEEQLMMGWQTGKDLEYPLAAVF 373

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
           R  +   K   + VK ++         +    
Sbjct: 374 RCTEDFYKDHEEWVKKIVRMSEVPVLIETLSD 405


>gi|169344114|ref|ZP_02865097.1| prolyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169297725|gb|EDS79824.1| prolyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 570

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +++   + + +R    N G      P L  ++ L +     D     +F L
Sbjct: 38  GIYNYMPLGLKVIENVKNIVREEMNNAGAQEFLAPALIPAE-LWQESGRWDAYGAEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D   +   L  
Sbjct: 97  KDRHNRDFCLGP 108


>gi|153816118|ref|ZP_01968786.1| hypothetical protein RUMTOR_02366 [Ruminococcus torques ATCC
          27756]
 gi|145846603|gb|EDK23521.1| hypothetical protein RUMTOR_02366 [Ruminococcus torques ATCC
          27756]
          Length = 75

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
          L+ +   G  D    E+ +R+ ++  I+  Y+ +GF  +ETP +E+ ++L      ++  
Sbjct: 5  LKKKPVTGMKDMMPAEMEVRDYVIGLIKETYKTFGFSSMETPCVEHIENLCSKQGGDN-- 62

Query: 67 NKGVFSLQDDDGQW 80
           K +F +   +G+ 
Sbjct: 63 EKLIFKIL-KEGRS 75


>gi|116327681|ref|YP_797401.1| prolyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|122284523|sp|Q053M7|SYP_LEPBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116120425|gb|ABJ78468.1| Prolyl-tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
          Length = 576

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        ++I  +I   IR      G    + P+L  SD   +         K +F +
Sbjct: 38  GLYFYLPLGLKILQKIKQIIREEMNKTGALEFDLPILTPSD-FWEQSGRWTAMGKEMFRI 96

Query: 74  QDDDGQWISLRY 85
           +D      +L  
Sbjct: 97  KDRHDLSYALGP 108



 Score = 40.6 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 38/124 (30%), Gaps = 7/124 (5%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQL 421
                          V + ++    +  SK + +  +L+   +            F   L
Sbjct: 458 DEKGIFWPISIAPFEVTLVSITKGEEQYSKAEEFYNVLKNENLEVFWDDRDVGPGFK--L 515

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K ++    P+ +  G      G + I +    KE S      E+      A++     EL
Sbjct: 516 KDSELIGFPIRVTIGKKFFENGEISIYNRKADKEESFVFAGFENLI----ARVESLRQEL 571

Query: 482 VSTV 485
            + +
Sbjct: 572 FAEL 575


>gi|78776267|ref|YP_392582.1| threonyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78496807|gb|ABB43347.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Sulfurimonas
           denitrificans DSM 1251]
          Length = 602

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/365 (10%), Positives = 108/365 (29%), Gaps = 17/365 (4%)

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           F+  +       +  +    ++  ++         M    ++ +       +   + +  
Sbjct: 248 FKAHRKRGYEPVRGPEMLRSDLWKTSGHYQNYGENMYFTNIDEIEFGVKPMNCVGHIKIY 307

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
            + +     L    K  E  +V R        GL  V+    +            A+   
Sbjct: 308 EEDLHSYRDLPL--KYFEYGVVHRHEMTGALHGLFRVREFTQDD-----AHIFCRADQIE 360

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           EQI  +V F+   +         ++    A   G + +  +S    K+  + N +     
Sbjct: 361 EQIIEVVDFVDKIMSTFEFNYKMMLSTKPAKAVGDDSVWEVSTQALKNAMDKNGLVYEID 420

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPAT 349
              G  Y      +       +  + +                 Y+G  +      +   
Sbjct: 421 EGGGAFYGPKIDIKIT---DAIGREWQCGTIQLDFNLPSRFELEYNGENNDKIQPVMIHR 477

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                  R I  L    +    +  + P  +  +          +  +  L   G  +E+
Sbjct: 478 AILGSFERFIGILTEHYAGEFPMF-IAPTQVAIVPIAPTHNDYAKELSDKLMDLGADSEI 536

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +  +  +   +++ A++   P+ ++ G  E +   + I+D    ++ +       S  + 
Sbjct: 537 YSKND-SLNKRVRTAEKTRVPMLVVIGDEEVASRTVAIRDRRTREQYNLSESEFLSLIQT 595

Query: 470 RVAQI 474
           ++ ++
Sbjct: 596 KINEV 600



 Score = 41.0 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 32/106 (30%), Gaps = 3/106 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF        R+R R+   +   +   G++P+  P +  SD L K         + ++  
Sbjct: 228 GFPIWLPAGGRLRARLESLLFKAHRKRGYEPVRGPEMLRSD-LWKTSGHYQNYGENMY-F 285

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            + D     ++        +   E+  +               +  
Sbjct: 286 TNIDEIEFGVKPMNCVGHIKIYEEDLHSY-RDLPLKYFEYGVVHRH 330


>gi|23465302|ref|NP_695905.1| threonyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227547263|ref|ZP_03977312.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|317483234|ref|ZP_07942229.1| threonyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|73919773|sp|Q8G6C2|SYT_BIFLO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|23325940|gb|AAN24541.1| threonyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|227212222|gb|EEI80118.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|316915303|gb|EFV36730.1| threonyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 677

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/408 (11%), Positives = 108/408 (26%), Gaps = 44/408 (10%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   LT   +++     +  +                 ++ 
Sbjct: 417 EQMKDELTSLLTFVL-NLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAKES 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +    +       
Sbjct: 476 NLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRP 534

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 535 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 576

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +       + + L    +R E+     + FG +++ A +   P  +I G  + +   +  
Sbjct: 577 EFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSF 635

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           +    G +L+    +                 ++++ +KK +Q N  +
Sbjct: 636 R-FRDGSQLNGVPVDTA-------------REQILTVIKKRVQVNSAD 669


>gi|68468847|ref|XP_721482.1| hypothetical protein CaO19.2984 [Candida albicans SC5314]
 gi|68469391|ref|XP_721210.1| hypothetical protein CaO19.10501 [Candida albicans SC5314]
 gi|46443119|gb|EAL02403.1| hypothetical protein CaO19.10501 [Candida albicans SC5314]
 gi|46443402|gb|EAL02684.1| hypothetical protein CaO19.2984 [Candida albicans SC5314]
          Length = 455

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/459 (10%), Positives = 112/459 (24%), Gaps = 93/459 (20%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++  ++N    YGF  + TPL+ +   L K     D     +F +    
Sbjct: 55  FLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLI-FKTKLWKKSGHWDNYKDDMFKVV--- 110

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G  I+                                          +   I+     + 
Sbjct: 111 GNDIT---------------------------------------KEEYTDNIEEHEYGLK 131

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                +   +      + + + ++ +D+     +R    G L  +        ++  I  
Sbjct: 132 PMNCPSHCMIFAKFDRSYQELPVRYSDFSS--LHRNEASGALSGLTRVRRFHQDDGHIFC 189

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
             +D++D      ++L+          +              +  +LS   E       E
Sbjct: 190 S-MDQIDGEIKNTLELIKDTYNVFGINE--------------IEFYLSTRPEDKFIGEIE 234

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                 +  K                 +         ++    +        I     + 
Sbjct: 235 TWDIAESQLKNVLNSTAGEGNWATREGDGAFYGPKIDVLLKDAFNKKHQVGTIQLDFQLP 294

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
            + +    G  G            +   V    F        + L   +           
Sbjct: 295 NRFELKYVGEDGKRDH--------QPILVHRAVFGSLERFFAILLDHYQGKWPFWINPRQ 346

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTA--------------GIRAEMFLGSSKNFGNQLKY 423
            LI  ++     +   +   + L                     ++     +  G + K 
Sbjct: 347 ALIVPIN--ESHVPVAEELQKKLSGNIVSCDNAIAPLTGFNFHVDID-KRGETVGARTKD 403

Query: 424 ADRRNCPLAIIQGTGERSRGML--------QIKDLAKGK 454
           A ++     I+ G  + + G          +IK++   +
Sbjct: 404 AIQKGYSYLIMIGDKDIANGTFAVRSRDDRKIKNMTSDE 442


>gi|322392280|ref|ZP_08065741.1| threonine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144815|gb|EFX40215.1| threonine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 647

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 40/142 (28%), Gaps = 5/142 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L                +      +   +  
Sbjct: 502 HYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTVIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+R ++     +N   Q K  A + +  P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRVDVD---ERNEKMQFKIRASQTQKIPYQLIVGDKEMDENAVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  +        A +A
Sbjct: 619 GQKETETMPVDAFVELILADIA 640



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRILERYIVDKEVAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPP 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337


>gi|187924092|ref|YP_001895734.1| Proline--tRNA ligase [Burkholderia phytofirmans PsJN]
 gi|187715286|gb|ACD16510.1| Proline--tRNA ligase [Burkholderia phytofirmans PsJN]
          Length = 380

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 7/135 (5%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            +K  L  +   G     +  +R + R+   +R   E  GF  I+  LL+ +D L +   
Sbjct: 26  ARKACLVHQDAAGLYSWMSLGLRAQRRVESVVREEMERAGFCEIQMSLLQDAD-LWRQTG 84

Query: 62  DEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
             D     +  L    G+   L     +L   + R    +++        Y+ G  +R+E
Sbjct: 85  RLDAYGDELMRLTSRSGRLFCLGATCEELATQMVR---THYNRTDMSLGLYQFGNKYRDE 141

Query: 119 KHGPGRFRQFIQCDV 133
               G   +  +  +
Sbjct: 142 LRTRGGLARAKEFIM 156


>gi|146297790|ref|YP_001192381.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|189083608|sp|A5FP01|SYT_FLAJO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146152208|gb|ABQ03062.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 648

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 85/282 (30%), Gaps = 32/282 (11%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     L  E   ++   L +            +  ++  ++   + +   E   
Sbjct: 383 DDAHIFCTPEQLDEEFKKVIDLVLYVFGSLGFENFTAQI--SLRDQEDREKYIGTDENWE 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
           K+            +   +EY     Y   L F V +   +    G++            
Sbjct: 441 KAENAIINAAKDKGLNTVVEYGEAAFYGPKLDFMVKDALGRQWQLGTIQVDYNLPERFEL 500

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G  +      +        + R I  L    +    +  M    I  +       + 
Sbjct: 501 TYKGADNELHRPVMIHRAPFGSMERFIAILLEHTAGNFPLWLMPEQAI-ILSLSEKYENY 559

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +    +L    IRA +    ++  G +++ A+ +  P  +I G  E   G + I+    
Sbjct: 560 AKKVLDLLENHEIRALID-NRNETIGKKIRDAEMQKIPFMLIVGEEEEKNGTISIR--RH 616

Query: 453 GKELSREIKNNESWREARVAQITIPISELV----STVKKILQ 490
           G+E    I              T+ I E        +KK L+
Sbjct: 617 GQEGKGNI--------------TVSIEEFASIVDEEIKKTLK 644



 Score = 37.1 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 18/47 (38%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R+R+   ++   +  G++ + +P +   +      
Sbjct: 260 GLPLWLPKGAALRDRLEQFLKRAQKKAGYEQVVSPHIGQKELYVTSG 306


>gi|308174589|ref|YP_003921294.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607453|emb|CBI43824.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554512|gb|AEB25004.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
          Length = 643

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 81/261 (31%), Gaps = 28/261 (10%)

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++  +  D   S +      +     EK F++  + ++         + I        G
Sbjct: 406 RLIQDVYEDFGLSDYTFRLSYRDPEDTEKYFDDDDMWNKAQSMLKAAMDEIGHDYYEAEG 465

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-----SI 353
              + G   +  +   +  E+    V        R+D       G+            S 
Sbjct: 466 EAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVST 525

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               +   ++  + +           +  +   S  L   +   + L+  G+R E+    
Sbjct: 526 MERFVAFLIEEHKGALPTWLAPVQFQVIPVSP-SVHLDYAKKVQERLQREGLRVELD-SR 583

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +  G +++ A  +  P  ++ G  E   G + ++    G++ S                
Sbjct: 584 DEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVR--KYGEQKS---------------- 625

Query: 474 ITIPISELVSTVKKILQENKE 494
            T+ + + V   KK + E K+
Sbjct: 626 ETVSLDDFV---KKAVAEAKK 643



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G++ + TP+L   D         +    G+F  
Sbjct: 265 GLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTPVLGSKDLYETS-GHWEHYQDGMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D + + LR             +         +YR  P+   E     R+  
Sbjct: 324 MEMDNETLVLRPMNCP-------HHMMIYKQDIHSYRELPIRIAELGTMHRYEM 370


>gi|50913800|ref|YP_059772.1| threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|68052904|sp|Q5XDC4|SYT_STRP6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|50902874|gb|AAT86589.1| Threonyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 647

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/378 (9%), Positives = 99/378 (26%), Gaps = 16/378 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +         Q D+  V    +  +  +  M       V 
Sbjct: 282 KELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVY 341

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++       
Sbjct: 342 KNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRAL 401

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   +     ++  E+ +   +  K   +  +  +  
Sbjct: 402 QLIIDVY---ADFNLTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALD-EMGVDYF 457

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 458 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 506

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       + 
Sbjct: 507 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKT 566

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR  G+RA++    ++    +++ +     P  +I G  E     + ++        +  
Sbjct: 567 LRDRGVRADVD-DRNEKMQYKIRTSQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTES 625

Query: 460 IKNNESWREARVAQITIP 477
           ++       A +A+ + P
Sbjct: 626 VEEFVENILADIARKSRP 643



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 75/323 (23%), Gaps = 25/323 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D   + +F +
Sbjct: 260 GLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPV 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N           I   
Sbjct: 319 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVRSYRELPIRIAEL 358

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    I      I    ++ L  I++            
Sbjct: 359 GMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNLTDYRF 418

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           RL      D    +    +             +          +       L I ++ ++
Sbjct: 419 RLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDIQVKTAL 478

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
               E +                 + +   G     + I   ++  +E +T  + E   G
Sbjct: 479 -GNEETLSTIQLDFLLPERFD--LKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKG 535

Query: 313 FPVMNEKQKPVVFGSVGGGGRYD 335
                     V    +      D
Sbjct: 536 AFPTWLAPHQVTVIPISNEAHID 558


>gi|328912917|gb|AEB64513.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 653

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 81/261 (31%), Gaps = 28/261 (10%)

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++  +  D   S +      +     EK F++  + ++         + I        G
Sbjct: 416 RLIQDVYEDFGLSDYTFRLSYRDPEDTEKYFDDDDMWNKAQSMLKAAMDEIGHDYYEAEG 475

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-----SI 353
              + G   +  +   +  E+    V        R+D       G+            S 
Sbjct: 476 EAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVST 535

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               +   ++  + +           +  +   S  L   +   + L+  G+R E+    
Sbjct: 536 MERFVAFLIEEHKGALPTWLAPVQFQVIPVSP-SVHLDYAKKVQERLQREGLRVELD-SR 593

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +  G +++ A  +  P  ++ G  E   G + ++    G++ S                
Sbjct: 594 DEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVR--KYGEQKS---------------- 635

Query: 474 ITIPISELVSTVKKILQENKE 494
            T+ + + V   KK + E K+
Sbjct: 636 ETVSLDDFV---KKAVAEAKK 653



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G++ + TP+L   D         +    G+F  
Sbjct: 275 GLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTPVLGSKDLYETS-GHWEHYQDGMFPP 333

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D + + LR             +         +YR  P+   E     R+  
Sbjct: 334 MEMDNETLVLRPMNCP-------HHMMIYKQDIHSYRELPIRIAELGTMHRYEM 380


>gi|157736342|ref|YP_001489025.1| threonyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157698196|gb|ABV66356.1| threonyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 602

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 7/79 (8%), Positives = 34/79 (43%), Gaps = 1/79 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +      +   +   + L    + +E++   +++   +++ A+++  P+ ++ G
Sbjct: 504 PTQVILVPIADSHVEYAKELQKALLENDLDSEIY-NMNESLNKRIRMAEKQRVPMIVVIG 562

Query: 437 TGERSRGMLQIKDLAKGKE 455
             E     + +++    ++
Sbjct: 563 DEEVENKTVALRNRRTREQ 581



 Score = 37.1 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K  R+R+++   +   +   G++P+  P +  ++ + K         + ++     D
Sbjct: 232 WLPKGARLRSKLEHLLYKAHRIRGYEPVRGPEILKAE-MWKISGHYANYKENMY-FTTID 289

Query: 78  GQWISLRYDLTAP 90
            Q   ++      
Sbjct: 290 DQEYGIKPMNCVG 302


>gi|302187169|ref|ZP_07263842.1| prolyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 571

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   I  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGLRVLRKVEAIVREEMDAAGALEILMPGIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  L D   +   L     ++   LAR    ++  +      Y+I   FR+E     
Sbjct: 90  GPELMRLVDLHNREFCLGPTHEEVITDLARNELNSYKQLP--INMYQIQTKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSA 140
              +  +  + +  S  
Sbjct: 148 GLMRGREFVMKDAYSFH 164


>gi|262165127|ref|ZP_06032864.1| prolyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262172111|ref|ZP_06039789.1| prolyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893187|gb|EEY39173.1| prolyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|262024843|gb|EEY43511.1| prolyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 571

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 50/169 (29%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E      D + A   K  D        
Sbjct: 146 RFGVMRAREFSMMDAYSFDIDKEGLQKSYDAMHAAYCKAFDRMGLDYRP 194



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  +I G    
Sbjct: 481 MNMHKSERVQEAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTVIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  +++   + +A++A
Sbjct: 540 DEGHFEYKNRRNGEKEAVAMESIIDFIQAKLA 571


>gi|307822387|ref|ZP_07652619.1| prolyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736953|gb|EFO07798.1| prolyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 569

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 46/159 (28%), Gaps = 8/159 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  ++    R   E  G   +  P L+ ++ L +     ++    
Sbjct: 34  KLAAGLYTWLPLGLRVMRKVEKITREEMEKTGALEVLMPGLQPAE-LWQETGRWEQYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +   L     ++   LAR    N                 +       RF 
Sbjct: 93  LARLKDRHDRDFCLGPTHEEIITDLAR----NEIKSYKQLPITYYQIQSKFRDEIRPRFG 148

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                +     + +   D E   +  + +        ++
Sbjct: 149 VMRSREFIMKDAYSFHLDHESLQVTYEAMHQAYTNIFNH 187



 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 29/113 (25%), Gaps = 23/113 (20%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQG 436
               M          +   Q L  AGI         +       ++D      P  I+ G
Sbjct: 477 CPMNMHKSERLKEASEKLYQDLLAAGIDVLFD---DRKVRAGFMFSDMELIGIPHCIVVG 533

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
                 G ++ K                       A   IP ++++  +K  L
Sbjct: 534 DRGLDSGTVEYK------------------ARTAEANEEIPFADIIDFLKAKL 568


>gi|192292254|ref|YP_001992859.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192286003|gb|ACF02384.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 687

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 99/356 (27%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD--KLNE 192
              S       E         +    KR      +N    +      +  + D   +L E
Sbjct: 334 WETSGHWEWYRENMFAAQSAGDDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRLAE 393

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             +V R        GL  V+        D++  F   A L  E I I    LS   +   
Sbjct: 394 FGVVHRYEPSGAMHGLMRVRG----FTQDDAHVFCTEAQLAEECIKINDLILSTYSDFGF 449

Query: 253 HELYE-LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE----YYTGCVY 307
                  +        G +E+   +E V  +  +  + K  + I   +      + G  +
Sbjct: 450 EGELTVKLSTRPEKRVGTDEMWDHAERVMATVLSEIKAKGGNRIKTEINPGEGAFYGPKF 509

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALK 363
           E +L   +  + Q            R+        G               + R    L 
Sbjct: 510 EYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFTGILI 569

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLK 422
              +    +  + PV +      S+     +     LR AG+RA++ L + K NF    +
Sbjct: 570 EHYAGNFPLW-LAPVQVVVTTITSEGDDYAKKVLAALRKAGLRADIDLRNEKINFKV--R 626

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
                  P  ++ G  E     + ++ L    +         +          +  
Sbjct: 627 EHSLAKVPALLVVGKKEAESHSVSVRRLGSEGQKVMPTDEAIAALVDEATPPDVKR 682


>gi|258625204|ref|ZP_05720117.1| prolyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582494|gb|EEW07330.1| prolyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 571

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 50/169 (29%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E      D + A   K  D        
Sbjct: 146 RFGVMRAREFSMMDAYSFDIDKEGLQKSYDAMHAAYCKAFDRMGLDYRP 194



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  +I G    
Sbjct: 481 MNMHKSERVQEAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTVIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  +++   + +A++A
Sbjct: 540 DEGHFEYKNRRNGEKEAVAMESIIDFIQAKLA 571


>gi|94676512|ref|YP_589036.1| prolyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|114152171|sp|Q1LSM8|SYP_BAUCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94219662|gb|ABF13821.1| prolyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 557

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 69/243 (28%), Gaps = 12/243 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +RI  ++ + +R    N G   +  P+++ ++   +      + 
Sbjct: 31  IIRQLASGLYTWLPTGLRILRKVENIVREEMNNIGAIEVSMPIVQPANLWLES-GRWGQY 89

Query: 67  NKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              +    D   +   L         DL     +   +    +      +R     R   
Sbjct: 90  GPELLRFTDRSTRQFLLGPTHEEVITDLIRNEVKSYKQLPLNLFQIKTKFRDEVRPRYGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
                F             S +     M          +G+   D      +   + G L
Sbjct: 150 MRSREFIMKDAYSFHTSQQSLQATYDLMYYTYNTIFNRIGL---DVRTVQADPGSIGGHL 206

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGL-QGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
               L       ++++++ A  K  +  L      L+         +  K  NL  E+I 
Sbjct: 207 SHEFLALVSNYEDQMLLIDASHKATERNLPSENLQLVDAPGIYTLTELVKLFNLPIEKIA 266

Query: 239 IMV 241
            ++
Sbjct: 267 QII 269


>gi|46191233|ref|ZP_00120366.2| COG0441: Threonyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189439311|ref|YP_001954392.1| threonyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|238692055|sp|B3DRX5|SYT_BIFLD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189427746|gb|ACD97894.1| Threonyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 677

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/408 (11%), Positives = 108/408 (26%), Gaps = 44/408 (10%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   LT   +++     +  +                 ++ 
Sbjct: 417 EQMKDELTSLLTFVL-NLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAKES 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +    +       
Sbjct: 476 NLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRP 534

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 535 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 576

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +       + + L    +R E+     + FG +++ A +   P  +I G  + +   +  
Sbjct: 577 EFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSF 635

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           +    G +L+    +                 ++++ +KK +Q N  +
Sbjct: 636 R-FRDGSQLNGVPVDTA-------------REQILTVIKKRVQVNSAD 669


>gi|303233025|ref|ZP_07319704.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480896|gb|EFL43977.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 589

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       +RIRN ++   + + + YG++ I+TP++  S  L +     D   + +++ 
Sbjct: 214 GFPFWLPNGMRIRNELMKYWQEMQDQYGYEQIQTPII-LSRKLWETSGHWDHYKENMYTT 272

Query: 74  QDDDGQWISLRYDLTAPLA 92
              D +  +++        
Sbjct: 273 VI-DDEDFAIKPMNCPGAC 290



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 52/162 (32%), Gaps = 23/162 (14%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D    + +   +   GF      + + ++  E           V +  +     +    +
Sbjct: 450 DSDGQKKRPIMIHRAGFGSFERFIGMLIEQYEGKFPVWLAPLQVKVLPVS--EKTRDYAR 507

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN-CPLAIIQGTGERSRGMLQIKDLAKG 453
             TQ L    IR ++     +  G +++ A   +  P  +I G  E   G + ++D    
Sbjct: 508 ELTQKLLKLKIRVKLD-DRDEKIGYKIREARSIDRVPYMLIVGEQEAQAGNISVRD---- 562

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
                        R     Q      + V+ +++ +   K++
Sbjct: 563 -------------RSNTTTQY--AFDDFVALLQRQIAARKDD 589


>gi|300767159|ref|ZP_07077071.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300494978|gb|EFK30134.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 688

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 55/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR +I   I +     G+  + TP+L   D   K     D   + +F  
Sbjct: 302 GLPYWMPNGATIRRQIERYIIDKEVANGYQHVYTPVLANLDVY-KQSGHWDHYREDMFPP 360

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG------PGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK G        R 
Sbjct: 361 MDMGDGEQLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALTGLSRVRE 420

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          E    ++  +M +  E   I    + +   + +  +   +   + 
Sbjct: 421 MTLNDGHTFVALDQIEEEFKKILSLMVEVYEDFDISDYRFRLSYRDPENKEKYFDDDAMW 480

Query: 186 GDDKLN 191
              +  
Sbjct: 481 ERSQKM 486



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 77/251 (30%), Gaps = 10/251 (3%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSF---LSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
             T N G      +   E+   ++S    +  D + S +      +     EK F++  +
Sbjct: 420 EMTLNDGHTFVALDQIEEEFKKILSLMVEVYEDFDISDYRFRLSYRDPENKEKYFDDDAM 479

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
                +      + + +      G   + G   +      +  E+    +        R+
Sbjct: 480 WERSQKMLKSAMDDMGLDYFEAEGEAAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERF 539

Query: 335 DGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           D       G+         G    + R +  L  +             +     ++    
Sbjct: 540 DLKYVGADGEEHRPVMIHRGLVSTMERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNGAHG 599

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
           +  +   + L   G+R  +    ++  G +++ +  +  P  ++ G  E + G + ++  
Sbjct: 600 AYAETVRRRLAAEGVRVSID-DRNEKMGYKIRESQTKKVPYLLVVGDQEVANGSVSVR-- 656

Query: 451 AKGKELSREIK 461
             G+E +    
Sbjct: 657 KYGEERTESEA 667


>gi|257453930|ref|ZP_05619207.1| prolyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257448702|gb|EEV23668.1| prolyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 586

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/164 (8%), Positives = 40/164 (24%), Gaps = 16/164 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        ++   ++   IR   +      +  P+++ ++ L +     +  
Sbjct: 31  MIRKSASGLYTWLPMGLKTLQKVKKIIREEMDAINCQELLMPVVQSAE-LWQESGRWEAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +   +D   +   L     ++   +AR    N                 +       
Sbjct: 90  GPELLRFKDRHQRDFVLGPTHEEVITDIAR----NLLKSYKQLPVSYYQVQTKFRDEIRP 145

Query: 120 ----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                    F             S +    +M     +    +G
Sbjct: 146 RFGVMRSREFIMKDAYSFHIDQPSLQRTYDDMYRAYHNIFTRLG 189


>gi|256394768|ref|YP_003116332.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360994|gb|ACU74491.1| threonyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 409

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R+ + + IR++    G+  + +P+L   +   +        ++ +F  
Sbjct: 27  GLPYWLPDGAVVRHAVEEYIRSVERRAGYQHVYSPVLGKRELY-EISGHWSHYSEDMFPP 85

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            D   + + LR  L          +         +YR  P+   E  G  R   
Sbjct: 86  MDLGAEQMVLRPSLCP-------THALIYRSRAHSYRELPLRMAEIGGMFRSEM 132



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 9/124 (7%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           DG   R    +    G       +   ++    +         V +  +  D    ++  
Sbjct: 269 DGARHRPVMVHRSIVGSM--ERVVAHLIEQHGGAFPAWLAPVQVAVLPVGEDEAGAARAF 326

Query: 395 -MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 L   G+R+E+      + G +++ A     P   + G  E +   + I+ L  G
Sbjct: 327 HDLCLDL---GLRSELMDPERGSLGARIREARL--VPYQAVIGGREAAADAVAIR-LRDG 380

Query: 454 KELS 457
           ++L 
Sbjct: 381 RKLE 384


>gi|229087132|ref|ZP_04219282.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696200|gb|EEL49035.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 643

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/330 (9%), Positives = 87/330 (26%), Gaps = 9/330 (2%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     +     M M   + +       +   +  N+      +  +I   G     
Sbjct: 309 TSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGTMHRY 368

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L  + ++    L    + +   +            L   +   + ++      + 
Sbjct: 369 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYKDFGLENYSFRLSYRD 428

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +  +        EK  + L    + +    Y +     ++     L+           
Sbjct: 429 PADTKKYYADDEMWEKAQSMLKEAMDEMGLEYYEAEG--EAAFYGPKLDVQVRTALGKDE 486

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               +           +   G                +        +   ++  + +   
Sbjct: 487 TLSTVQLDFLLPERFELTYVGEDGKQHRPVVIHRGVVSTME---RFVAFLIEEYKGAFPT 543

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +  +      L   +   + L+ AGIR E+     K  G +++ A  +  P 
Sbjct: 544 WLAPVQVQVIPVSPQV-HLDYAKKVQEELQRAGIRVEVDTREEK-IGYKIREAQMQKIPY 601

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            ++ G  E +   + ++    G++ S  I 
Sbjct: 602 MLVVGDNEVTENGVNVR--KYGEQKSETIA 629



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 71/258 (27%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+D + TP+L   +         +    G+F  
Sbjct: 265 GLPLWLPKGATIRRIIERYIVDKEASLGYDHVYTPVLGSRELYETS-GHWNHYRDGMFPS 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEELVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAELGTMHRYEMSGALSG 376

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA + +      E +  +  +  + +     L+    ++         + 
Sbjct: 377 LQRVRGMTLNDAHIFVRPDQIKEELK-RVVNLTLEVYKDFGLENYSFRLSYRDPADTKKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +K      + +  +  E           G  L  +    +    ++   +   
Sbjct: 436 YADDEMWEKAQSMLKEAMDEMGLEYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLDF 495

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  + T  GE G   
Sbjct: 496 LLPERFELTYVGEDGKQH 513


>gi|160900048|ref|YP_001565630.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687213|sp|A9C3D4|SYT_DELAS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160365632|gb|ABX37245.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 643

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 67/258 (25%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  ++ P +    +L +     D+  + +F+ 
Sbjct: 265 GTVFWHPKGWSLWQEVEQYMRRVYRDNGYQEVKGPQI-LDKTLWEKTGHWDKYRENMFT- 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 323 TESEKRDYALKPMNCPG-------HILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +          V            +    D I +          ++ 
Sbjct: 376 IMRVRGFTQDDGHVFCTEDQIQPEVLAFTTLLQKVYADFGFSDIIYKVATRPEARIGSDE 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                + DK +   +  ++    E           G  +     D +         +   
Sbjct: 436 -----SWDKAEAALINSLEASGCEYVISPGDGAFYGPKIEYTLKDAIGRQWQCGTIQVDF 490

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 491 SMPERLDAEYVGEDGDRH 508


>gi|72388976|ref|XP_844783.1| threonyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62176044|gb|AAX70165.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801317|gb|AAZ11224.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 799

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 51/480 (10%), Positives = 129/480 (26%), Gaps = 31/480 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +++  R  Y   GF+ + +P + +S  L       D+    +F L + +
Sbjct: 314 WLPHGARIYNTLIEFQRKQYRRRGFEEVVSPNM-FSSRLWMVSGHWDKYADNMF-LINVE 371

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG---------PGRFRQ 127
            +   ++           A    +    P R    G + RNE  G           +   
Sbjct: 372 KEDHGMKPMNCPGHCLMFAMQPHSYRELPIRYADFGVLHRNELSGALTGLTRVRRFQQDD 431

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTL---------EAVGIKRNDYHIGINNRKILDGI 178
                  +       +       + D L              K     +       L   
Sbjct: 432 AHIFCRMDQVKDEIHSALIFLKDVYDVLGFKFFLKHSTRPENKLGSDEMWDEAESYLQAA 491

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL-----T 233
           L       D+  +        +    K  ++ ++ +L +     + + +   ++      
Sbjct: 492 LNSFCGIPDELPDPFNKGSTFVYDGRKESVKKLRAMLKKRGDKKNDENSPADDVWPGPTH 551

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            +  +      +    K    + + ++          +  +      K    SN      
Sbjct: 552 EDAWEENTGDGAFYGPKIDIVVEDALRRRHQCATIQLDFNLPKRFGLKYTLPSNAAGDDG 611

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG----RYDGLVSRFKGQNVPAT 349
              +  E +     E     P    +       S           D  +   + + V   
Sbjct: 612 PAPKATECHKDPNAELKADKPEGKVEAAAGAPKSSYEKAAHELNIDQRLDANQARPVMIH 671

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     +A+       +    + P  +  +    ++ +  Q        AG  A++
Sbjct: 672 RAIFGSLERCIAILCEHYGGDWPFWLSPRQVIVVPVSLENAAYAQTVRDTFFAAGFFADV 731

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             G++     +++ A+       ++ G  E+    + ++     +  ++ +     W   
Sbjct: 732 DNGTA-TLEKKIRNAELARYNFILVVGQAEQEGQSVNVRTRDNRRHGTKTLDEALQWLRE 790


>gi|91774775|ref|YP_544531.1| prolyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123254834|sp|Q1H497|SYP_METFK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91708762|gb|ABE48690.1| prolyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 573

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/285 (10%), Positives = 77/285 (27%), Gaps = 21/285 (7%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++  L  G        +R+  ++   +R      G   +  P ++  + L +  
Sbjct: 26  MLRAGLIK-RLGSGLYSWMPLGLRVLRKVETIVREEMNRAGALELLMPAVQPKE-LWEET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP---- 113
                    +  ++D   +         ++   +AR    ++  +       +       
Sbjct: 84  GRWAVFGPQMLKIRDRHERDFCFGPTHEEVITDIARREIRSYKQLPLNFYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK-----------R 162
             R        F             S +     M    ++    +G+K            
Sbjct: 144 RPRFGVMRAREFVMKDGYSFHTSLESLQQTYDTMYQAYSNIFNRLGLKFRAVRADTGAIG 203

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN 222
            D     +              H D   N  L    A +       + ++ +    +T  
Sbjct: 204 GDGSHEFHVLADSGEDALAYCEHSDFAANVELAEALAPEHPRGEPKEPLREVDTPKQT-T 262

Query: 223 SGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK 267
             D      ++ +Q    ++ ++ D   +      L++G  A  +
Sbjct: 263 CEDVAALLGISLQQTVKSIAVVATDEAGNSQFYLLLLRGDHALNE 307


>gi|296454199|ref|YP_003661342.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183630|gb|ADH00512.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 677

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/408 (11%), Positives = 108/408 (26%), Gaps = 44/408 (10%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   LT   +++     +  +                 ++ 
Sbjct: 417 EQMKDELTSLLTFVL-NLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAKES 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +    +       
Sbjct: 476 NLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRP 534

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 535 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 576

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +       + + L    +R E+     + FG +++ A +   P  +I G  + +   +  
Sbjct: 577 EFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSF 635

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           +    G +L+    +                 ++++ +KK +Q N  +
Sbjct: 636 R-FRDGSQLNGVPVDKA-------------REQILTVIKKRVQVNSAD 669


>gi|29829100|ref|NP_823734.1| prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|81838439|sp|Q82K46|SYP1_STRAW RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|29606206|dbj|BAC70269.1| putative prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 564

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 2/100 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      +          + L  AG+R  +   +  + G +  
Sbjct: 460 DEQGLCWPKEIAPADVHVVAAGK-ALQTELALDVAEKLGAAGVRVLVDDRAGVSPGVKFT 518

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            A+    P  ++ G    + G+L++KD   G+     ++ 
Sbjct: 519 DAELIGVPQILVAGRRS-AEGVLELKDRKTGEREELTVEE 557



 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++   +   +R   +  G   +  P L   +         +     +F L+D  
Sbjct: 46  WLPLGKKVLENVARVVREEMDAMGGQEVLLPALLPKEPYEA-TGRWEEYGPELFRLKDRK 104

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 105 GAEYLLGP 112


>gi|312132685|ref|YP_004000024.1| thrs [Bifidobacterium longum subsp. longum BBMN68]
 gi|322689212|ref|YP_004208946.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|311773642|gb|ADQ03130.1| ThrS [Bifidobacterium longum subsp. longum BBMN68]
 gi|320460548|dbj|BAJ71168.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 677

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/408 (11%), Positives = 108/408 (26%), Gaps = 44/408 (10%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   LT   +++     +  +                 ++ 
Sbjct: 417 EQMKDELTSLLTFVL-NLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAKES 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +    +       
Sbjct: 476 NLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRP 534

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 535 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 576

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +       + + L    +R E+     + FG +++ A +   P  +I G  + +   +  
Sbjct: 577 EFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSF 635

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           +    G +L+    +                 ++++ +KK +Q N  +
Sbjct: 636 R-FRDGSQLNGVPVDKA-------------REQILTVIKKRVQVNSAD 669


>gi|187251094|ref|YP_001875576.1| prolyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|226701286|sp|B2KCB2|SYP_ELUMP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|186971254|gb|ACC98239.1| Prolyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 573

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/347 (9%), Positives = 90/347 (25%), Gaps = 8/347 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G  +     +++  ++   +R   +  G   +  PL++  + L +         K 
Sbjct: 34  KTASGIYEWLPLGLKVLKKVEQIVREEMDAAGAHEVWLPLIQPKE-LWEESGRWTYYGKE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D  G          ++   + R    ++  +      Y+    FR+E     RF 
Sbjct: 93  LLRIKDRKGAEFCFAPTAEEVITDVVRRDVTSYKQLP--VALYQFASKFRDEI--RPRFG 148

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                +     + +  A  E              K              D          
Sbjct: 149 VMRAREFYMKDAYSFHATEESINEWYLKFFEAYKKVCTRCGFKFKAVEADTGAIGGNFSH 208

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +  +          D    +     K  + + +   + +  K     +      +  ++ 
Sbjct: 209 EFMVLADTGENEIADCDCGYAANTEKAEIFKPKFPAAKEELKTIEKVNTPNATTIEDVAK 268

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
            L ++     +L+  T  G+     +    EL         + +                
Sbjct: 269 MLGQTADRFIKLLVFTADGQPVVALMRGDHELNEHKLKALLKAQELEKANEETYAKVTGS 328

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
           +    G   + EK   +   +          ++    ++V     + 
Sbjct: 329 FVGYAGPVGLKEKNPKIKLFADYHVAGIVNGIAGGNEKDVHIINVTP 375



 Score = 41.0 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITT-MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                +      L++   D +     +       L  AG+   +   + +  G + K AD
Sbjct: 466 IWPAPLAPFDIYLVSIDTDINPKVKEETDSIYNQLTQAGLNVLLDDRNER-PGIKFKDAD 524

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               P  I+  +     G  + K     + + R++ +     +   A
Sbjct: 525 LIGLPHRIVISSRTVETGEYEYKQRTSKEAIRRKLADISEQIKEFQA 571


>gi|110668486|ref|YP_658297.1| threonyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121687233|sp|Q18H54|SYT_HALWD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|109626233|emb|CAJ52691.1| threonine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 642

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 5/133 (3%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            +  +   +    +       +V ++              V I  +    D L       
Sbjct: 501 NTDHQPVMIHRALYGSYERFFMVLIEHFNGKFPLWLAPDQVRILPIS--DDQLGYAHRIK 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L  +  R  +    +   G +++ A     P  II G  E S   + ++D  + ++  
Sbjct: 559 NEL--SDFRVSIE-DRAWTLGRKIRAAQEERVPYMIIIGDDEVSTETISVRDRKEREKQD 615

Query: 458 REIKNNESWREAR 470
            ++    S  ++ 
Sbjct: 616 VDLSTFHSHLKSE 628



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 8/164 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +I N +    R++    G++P+ETP L  ++ L K     +     +F L
Sbjct: 262 GLPLYHPDGKKILNELSSFARSLNLEAGYEPVETPHLFRTE-LWKQSGHYENYVDDMF-L 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ-----F 128
            D   +   L+       A    ++  +                 K   G          
Sbjct: 320 LDVSDEEYGLKPMNCPGHATIFDQHSWSY-RDLPVRYFEDGKVYRKEQRGELSGLSRVWS 378

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
              D  ++    E  + E+  +M      +     + H+ +  R
Sbjct: 379 FTIDDGHLFCQPEQIEQEVTHVMDAIYSVLDTFGLEAHVALATR 422


>gi|269119235|ref|YP_003307412.1| threonyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613113|gb|ACZ07481.1| threonyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 634

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/145 (8%), Positives = 43/145 (29%), Gaps = 3/145 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + + N++ +  R  ++  G+  I+TP++   + L +         + +++ 
Sbjct: 260 GFPFFMPKGMEVINKLQEIWRREHKKAGYKEIKTPVMLDKE-LWEISGHWFNYRENMYTS 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +  D +  +++            +N                  +     G     ++   
Sbjct: 319 EI-DEKEYAIKPMNCPGAILAY-KNNLHSYKNFPLKYGEMGLVHRHEFSGALHGLMRVRA 376

Query: 134 DNVGSSAETADAEMCMMMADTLEAV 158
                +      +        +  +
Sbjct: 377 FTQDDAHVFCTEDQIEDQIMEIINL 401



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 49/139 (35%), Gaps = 3/139 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +        I R +  L    +    I  + PV ++ +    +    
Sbjct: 493 SYIGPDGEKHQPVMIHRAMYGSIERFMGILIEHYAGAFPIW-LAPVQVSILTISGEQAEY 551

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCPLAIIQGTGERSRGMLQIKDLA 451
                + L+  GIR E+ +   +  G +++ A+  +  P+ +I G  E +   + I+   
Sbjct: 552 ASDLFKKLQNIGIRTELDI-RDEKIGYKIREANAEQKIPIQLIIGKNEVANNEVNIRRFG 610

Query: 452 KGKELSREIKNNESWREAR 470
             +  + + ++     E  
Sbjct: 611 SQESNTMKAEDFLKLIEEE 629


>gi|150007315|ref|YP_001302058.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|255014060|ref|ZP_05286186.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|256839604|ref|ZP_05545113.1| threonyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|166225472|sp|A6L9S2|SYT_PARD8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|149935739|gb|ABR42436.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256738534|gb|EEU51859.1| threonyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 651

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 52/462 (11%), Positives = 107/462 (23%), Gaps = 82/462 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +  P                  NK ++ 
Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQARYNYQEVMCP---------------PIGNKLLY- 304

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                  G   +  K          + +
Sbjct: 305 ------------------------------------ITSGHYAKYGKDSFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      + + +             R    G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCMIYKNSPRSYKDL-----------PLRLAEFGTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKQEFLNVMDIISIVFKTMNFENFEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DENWEKAEQAIVEACEEKGLKAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   + +              D    R    +    G       + V ++        
Sbjct: 495 NLPERFQLEYTGA----------DNQKHRPVMIHRAPFGSM--ERFVAVLIEHTAGKFPL 542

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  M              + L    IRA +    ++  G +++  + +  P 
Sbjct: 543 WLTPEQVCI--MPISEKFNDYAWQIARELGNQEIRAIVD-DRNEKIGRKIRDNELKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +I G  E     + ++   +G + S +I    +     V +
Sbjct: 600 MLIVGEKEAENSEVSVRKQGEGDKGSMKIATFAALLNGEVEE 641


>gi|116330596|ref|YP_800314.1| prolyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281649|sp|Q04U64|SYP_LEPBJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116124285|gb|ABJ75556.1| Prolyl-tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 576

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        ++I  +I   IR      G    + P+L  SD   +         K +F +
Sbjct: 38  GLYFYLPLGLKILQKIKQIIREEMNKTGALEFDLPILTPSD-FWEQSGRWTAMGKEMFRI 96

Query: 74  QDDDGQWISLRY 85
           +D      +L  
Sbjct: 97  KDRHDLSYALGP 108



 Score = 40.6 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 38/124 (30%), Gaps = 7/124 (5%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQL 421
                          V + ++    +  SK + +  +L+   +            F   L
Sbjct: 458 DEKGIFWPISIAPFEVTLVSITKGEEQYSKAEEFYNVLKNENLEVFWDDRDVGPGFK--L 515

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K ++    P+ +  G      G + I +    KE S      E+      A++     EL
Sbjct: 516 KDSELIGFPIRVTIGKKFFENGEISIYNRKADKEESFVFAGFENLI----ARVESLRQEL 571

Query: 482 VSTV 485
            + +
Sbjct: 572 FAEL 575


>gi|28378228|ref|NP_785120.1| threonine--tRNA ligase 1 [Lactobacillus plantarum WCFS1]
 gi|38258333|sp|Q88WU9|SYT_LACPL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28271063|emb|CAD63968.1| threonine--tRNA ligase 1 [Lactobacillus plantarum WCFS1]
          Length = 654

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 55/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR +I   I +     G+  + TP+L   D   K     D   + +F  
Sbjct: 268 GLPYWMPNGATIRRQIERYIIDKEVANGYQHVYTPVLANLDVY-KQSGHWDHYREDMFPP 326

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG------PGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK G        R 
Sbjct: 327 MDMGDGEQLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALTGLSRVRE 386

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          E    ++  +M +  E   I    + +   + +  +   +   + 
Sbjct: 387 MTLNDGHTFVALDQIEEEFKKILSLMVEVYEDFDISDYRFRLSYRDPENKEKYFDDDAMW 446

Query: 186 GDDKLN 191
              +  
Sbjct: 447 ERSQKM 452



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 77/251 (30%), Gaps = 10/251 (3%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSF---LSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
             T N G      +   E+   ++S    +  D + S +      +     EK F++  +
Sbjct: 386 EMTLNDGHTFVALDQIEEEFKKILSLMVEVYEDFDISDYRFRLSYRDPENKEKYFDDDAM 445

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
                +      + + +      G   + G   +      +  E+    +        R+
Sbjct: 446 WERSQKMLKSAMDDMGLDYFEAEGEAAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERF 505

Query: 335 DGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           D       G+         G    + R +  L  +             +     ++    
Sbjct: 506 DLKYVGADGEEHRPVMIHRGLVSTMERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNGAHG 565

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
           +  +   + L   G+R  +    ++  G +++ +  +  P  ++ G  E + G + ++  
Sbjct: 566 AYAETVRRRLAAEGVRVSID-DRNEKMGYKIRESQTKKVPYLLVVGDQEVANGSVSVR-- 622

Query: 451 AKGKELSREIK 461
             G+E +    
Sbjct: 623 KYGEERTESEA 633


>gi|325263795|ref|ZP_08130528.1| threonine--tRNA ligase [Clostridium sp. D5]
 gi|324030833|gb|EGB92115.1| threonine--tRNA ligase [Clostridium sp. D5]
          Length = 641

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N +LD  R I+   G+  I TP++  S  L +     D     +++ 
Sbjct: 260 GFPFFLPKGMVLKNTLLDYWREIHSRNGYVEIATPIM-LSRHLWETSGHWDHYKDNMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 VI-DEEDFAIKPMNCPG 334



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 42/103 (40%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      +   +     L  AGIRA++ + + K  G +++ A  +  P  +
Sbjct: 533 WLAPVQVKVLPISDKYIKYGKKVQDTLNKAGIRADIDMRAEK-IGYKIREAQMQKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E    ++ ++    G E  + +    +   + +A   +
Sbjct: 592 VVGAKEEEDRLVSVRSRFAGDEGQKSMDEFIASITSEIAGKKV 634


>gi|254556435|ref|YP_003062852.1| threonine-tRNA ligase 1 [Lactobacillus plantarum JDM1]
 gi|308180379|ref|YP_003924507.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|254045362|gb|ACT62155.1| threonine-tRNA ligase 1 [Lactobacillus plantarum JDM1]
 gi|308045870|gb|ADN98413.1| threonine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 654

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 55/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR +I   I +     G+  + TP+L   D   K     D   + +F  
Sbjct: 268 GLPYWMPNGATIRRQIERYIIDKEVANGYQHVYTPVLANLDVY-KQSGHWDHYREDMFPP 326

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG------PGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK G        R 
Sbjct: 327 MDMGDGEQLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALTGLSRVRE 386

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          E    ++  +M +  E   I    + +   + +  +   +   + 
Sbjct: 387 MTLNDGHTFVALDQIEEEFKKILSLMVEVYEDFDISDYRFRLSYRDPENKEKYFDDDAMW 446

Query: 186 GDDKLN 191
              +  
Sbjct: 447 ERSQKM 452



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 77/251 (30%), Gaps = 10/251 (3%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSF---LSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
             T N G      +   E+   ++S    +  D + S +      +     EK F++  +
Sbjct: 386 EMTLNDGHTFVALDQIEEEFKKILSLMVEVYEDFDISDYRFRLSYRDPENKEKYFDDDAM 445

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
                +      + + +      G   + G   +      +  E+    +        R+
Sbjct: 446 WERSQKMLKSAMDDMGLDYFEAEGEAAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERF 505

Query: 335 DGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           D       G+         G    + R +  L  +             +     ++    
Sbjct: 506 DLKYVGADGEEHRPVMIHRGLVSTMERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNGAHG 565

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
           +  +   + L   G+R  +    ++  G +++ +  +  P  ++ G  E + G + ++  
Sbjct: 566 AYAETVRRRLAAEGVRVSID-DRNEKMGYKIRESQTKKVPYLLVVGDQEVANGSVSVR-- 622

Query: 451 AKGKELSREIK 461
             G+E +    
Sbjct: 623 KYGEERTESEA 633


>gi|159028099|emb|CAO87176.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 618

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +    +           L+ AG R E+   S +  G Q++  +    P+  
Sbjct: 516 WLAPIQVRLLPVSDEQQHYALEVAVQLKQAGYRVEID-KSGERLGKQIRTGELEKIPVLA 574

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E S   L I+    G   S  + +     +  +   T
Sbjct: 575 VIGKREVSSKTLSIRTRQGGDLGSMTLADLLEKMQTAILSKT 616



 Score = 41.4 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      +   +R  I D  R  +   G+  + TP L   D L K     D     +F
Sbjct: 241 GLVFWHPRGATMRYLIEDYWRQAHLEAGYQFLYTPHLANLD-LWKTSGHWDFYRDNMF 297


>gi|86742942|ref|YP_483342.1| prolyl-tRNA synthetase [Frankia sp. CcI3]
 gi|114152196|sp|Q2J529|SYP_FRASC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|86569804|gb|ABD13613.1| prolyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 468

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/218 (8%), Positives = 63/218 (28%), Gaps = 8/218 (3%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  + + +       + + +   R          E ++G     +       G     
Sbjct: 177 LEVYRDFMTQVLAVPVFVGVKTRRERFAGATNTMTCEGMMGDGKALQMATSHELGQNFAR 236

Query: 332 GRY-----DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                                     +    ++                  V++  +  +
Sbjct: 237 AFDIDFLGADGARHLAWTTSWGCSTRMVGGLIMAHGDDNGLRVPPRLAPTQVVVLPVRDE 296

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              ++K +     L  AG+R ++      +FG ++  A+ +  P+ +  G  + + G + 
Sbjct: 297 ETVVAKARQIAAALTDAGLRVQVDARPGLSFGRRVTDAEIKGIPVRVEVGPRDLAAGNVT 356

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           +      +++   +    +     + ++    ++L + 
Sbjct: 357 LVRRDTSEKVPVPLAEVATRVPVLLGEV---QADLYAE 391


>gi|148235110|ref|NP_001079554.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Xenopus laevis]
 gi|28278090|gb|AAH44273.1| MGC53152 protein [Xenopus laevis]
          Length = 466

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 50/172 (29%), Gaps = 16/172 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R   P G        +R   +++  I    ++ G   I+ P L  S +L +  
Sbjct: 65  MIKAGLIRPSNP-GCFHYLPYTVRAMEKLIRLIDKEMQDIGGQKIDMPTL-GSAALWRQS 122

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              D   K +F L+D   Q   L     +L   +   VA                   + 
Sbjct: 123 GRWDLMGKELFRLKDRHNQEYCLGPTHEEL---VTHLVASEGGINNKELPLLLYQITRKF 179

Query: 118 EKHGPG--------RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                          F        D    SA      +C   ++   A+G+ 
Sbjct: 180 RDEQRPCFGLLRGREFYMKDMYTFDISEESAYETYRNVCDAYSNIFRALGVH 231


>gi|311105446|ref|YP_003978299.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310760135|gb|ADP15584.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 650

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/153 (10%), Positives = 42/153 (27%), Gaps = 4/153 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   +  ++   +R++Y + G+  ++ P +   D  L K     D   + +F+
Sbjct: 266 GLIFWHPKGWALWQQVEQYMRSVYRDNGYQEVKAPQI--LDISLWKKTGHWDNYRENMFT 323

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + + +   L+        +       +       Y         +             
Sbjct: 324 -TESENRVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRG 382

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                      + ++    AD    +     D+
Sbjct: 383 FTQDDGHIFCTEEQLQDECADFTALLQKVYRDF 415



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 1/87 (1%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +     +      + PV          S       TQ L+  G R E  L   +    ++
Sbjct: 528 MLIENHAGAMPPWLAPVQAVVCCISEPSADYAAEITQSLKKQGFRVESDL-RGEKITRKI 586

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIK 448
           +    +  P  ++ G  E+  G + ++
Sbjct: 587 REHSLQKVPYILVVGDKEKQNGTVAVR 613


>gi|269101961|ref|ZP_06154658.1| prolyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161859|gb|EEZ40355.1| prolyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 572

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GPELLRFTDRHARPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E      D +     K  D        
Sbjct: 146 RFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLEYRP 194



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L  AGI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMAKSEEVKEAAEKLYADLTAAGIDV-LFDDRKERPGVMFADHELIGIPHTIVIGNRSL 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G ++ K+   G + +  + +  ++  +++A
Sbjct: 540 ENGEMEYKNRRTGTKENVAVTDIVAFVTSKLA 571


>gi|260425386|ref|ZP_05779366.1| ATP phosphoribosyltransferase regulatory subunit [Citreicella sp.
           SE45]
 gi|260423326|gb|EEX16576.1| ATP phosphoribosyltransferase regulatory subunit [Citreicella sp.
           SE45]
          Length = 362

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/361 (13%), Positives = 106/361 (29%), Gaps = 46/361 (12%)

Query: 32  SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL 91
            +R  +   G   ++  +L+ +++L     ++ R     +   D     + LR D T P+
Sbjct: 14  RLRARFLEAGAQNVDCAILQPAETLLDLYGEDIRARA--YVTHDPSRGEVMLRPDFTIPV 71

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
              V  + ++   P R    G VFR ++  P R  ++ Q   +                 
Sbjct: 72  ---VQMHMESGAAPSRYTYCGEVFRRQEEHPERASEYFQVGYELFADDDPARADAEVF-- 126

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR-------AIDKLD 204
              L A  +  +       +  IL   ++ + +    +      + R             
Sbjct: 127 --ALFAETLAPHGLRAVTGDIGILASAVQALQISERRRAALMRHIWRPRRFRALLDRYSG 184

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK-------------- 250
           +  +   +  L E     +         + E+I   ++ L  D  +              
Sbjct: 185 RSPVPPSRKALLEAADPMASAGPMIGLRSEEEIAARIAALREDAAEGPLCRSQVQLIDSL 244

Query: 251 ---------SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
                    ++ +L+++                  E +   G +   ++  ++  R    
Sbjct: 245 LAVRETCSFALEQLHDIAVDLPGMLPAVELFERRCEALAARGVDVAALEFEASYGR---- 300

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 E   GF       +      V  GGRYD L +R            +    L++ 
Sbjct: 301 ---TSMEYYDGFVFGFLPAQRPDLPPVATGGRYDALTARLGQGRAAPAVGGVIRPGLLLQ 357

Query: 362 L 362
           L
Sbjct: 358 L 358


>gi|220919170|ref|YP_002494474.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254782880|sp|B8J9M0|SYP_ANAD2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219957024|gb|ACL67408.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 574

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 11/116 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D      R   ++   +R   +  G      P L  ++   K     D     +F L
Sbjct: 41  GIYDYLPLAKRSLAKVEAIVREEMDAIGGQEFYLPALHPAEI-WKESGRWDVMGDNMFRL 99

Query: 74  QDDDGQWISLRYDLT-----APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           +D  G    L   +T       +AR   +   +     + +        ++  P  
Sbjct: 100 KDRKGGDYCLG--MTHEEIFTAVAR---DELRSYRQLPQVWYQIQTKFRDEPRPKS 150



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
              + T+  + +     +     L   G+         +  G + K AD    P+ I  G
Sbjct: 477 HATVLTLGPEPELRKAAEEVVAALGKEGVEVLFDDRDERA-GVKFKDADLLGIPIRIAVG 535

Query: 437 TGERSRGMLQIKDLAKG 453
               + G ++ K L KG
Sbjct: 536 KKGLAAGNVEWK-LRKG 551


>gi|197124440|ref|YP_002136391.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|226731425|sp|B4UGI0|SYP_ANASK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|196174289|gb|ACG75262.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 574

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 11/116 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D      R   ++   +R   +  G      P L  ++   K     D     +F L
Sbjct: 41  GIYDYLPLAKRSLAKVEAIVREEMDAIGGQEFYLPALHPAEI-WKESGRWDVMGDNMFRL 99

Query: 74  QDDDGQWISLRYDLT-----APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           +D  G    L   +T       +AR   +   +     + +        ++  P  
Sbjct: 100 KDRKGGDYCLG--MTHEEIFTAVAR---DELRSYRQLPQVWYQIQTKFRDEPRPKS 150



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
              + T+  + +     +     L   G+         +  G + K AD    P+ I  G
Sbjct: 477 HATVLTLGPEPELRKAAEEVVAALGKEGVEVLFDDRDERA-GVKFKDADLLGIPIRIAVG 535

Query: 437 TGERSRGMLQIKDLAKG 453
               + G ++ K L KG
Sbjct: 536 KKGLAAGNVEWK-LRKG 551


>gi|71279026|ref|YP_269920.1| prolyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|114152184|sp|Q47Z50|SYP_COLP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71144766|gb|AAZ25239.1| prolyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 569

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           L  G        +R+  ++   +R   +  G + I  P+++ +D L +     D     +
Sbjct: 35  LASGLYTWLPTGLRVLKKVEQIVREEMQRAGGNEILMPMVQPAD-LWQESGRLDDYGPEL 93

Query: 71  FSLQDDDGQWISLRY 85
             + D   +   L  
Sbjct: 94  LRINDRHKRPFVLGP 108



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 3/102 (2%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                       V I  M+    +      +   + L  AGI         +  G     
Sbjct: 466 GIKWPKAIAPFQVAIVPMNMAKSARVKETAEALYESLNQAGIEVLFDDRKER-PGVMFAD 524

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            +    PL +I G        +++K+   G++    I    S
Sbjct: 525 HELMGTPLLLIIGERNLDAQQIELKNRITGEKSLIAIDEVMS 566


>gi|253577580|ref|ZP_04854892.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843049|gb|EES71085.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 645

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 43/98 (43%), Gaps = 1/98 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +   S+  +  +     LR AGIRAE  L  ++  G +++ A     P  +
Sbjct: 544 WLAPVQAKVLPVSSNFDAYARQVEDKLRAAGIRAESDL-RNEKLGYKIREAQLEKLPYML 602

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           + G  E++ G + ++   +G   ++ +    +  +  +
Sbjct: 603 VVGENEQNAGTVSVRKRGQGDLGAKAVDEVIAQLQEEI 640



 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 68/258 (26%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  +   I +I E  G+  + TP+L   D   K     +   + +F  
Sbjct: 265 GLPIWLPKGATVRRTLERYIVDIEERLGYQHVYTPVLGNVDLY-KTSGHWEHYQEDMFPK 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D +   LR             +        R+YR  P+   E     R+        
Sbjct: 324 MAIDTEEFVLRPMNCP-------HHMMVYKSDMRSYRDLPIRIAELGMQHRYEMSGALT- 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                 + T +        D ++    +  D    + N   +     ++         + 
Sbjct: 376 GLHRVRSMTLNDAHIFCRLDQIKDEFKRVLDLIKQVYNDFGIHEYRFRLSYRDPQDTEKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +   +   + V+                G  L  +    +    ++   +   
Sbjct: 436 YQNDEMWNTAQRMLREVVEEAGLPFFEAEGEAAFYGPKLDVQIKTALGKEETLSTVQIDF 495

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  +    G+ G   
Sbjct: 496 LLPERFELEYVGDDGQKH 513


>gi|317403269|gb|EFV83787.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 650

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/153 (10%), Positives = 42/153 (27%), Gaps = 4/153 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   +  ++   +R++Y + G+  ++ P +   D  L K     D   + +F+
Sbjct: 266 GLIFWHPKGWALWQQVEQYMRSVYRDNGYQEVKAPQI--LDISLWKKTGHWDNYRENMFT 323

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + + +   L+        +       +       Y         +             
Sbjct: 324 -TESENRVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRG 382

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                      + ++    AD    +     D+
Sbjct: 383 FTQDDGHIFCTEEQLQDECADFTALLQKVYRDF 415



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 1/87 (1%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +     +      + PV          S       TQ L+  G R E  L   +    ++
Sbjct: 528 MLIENHAGAMPPWLAPVQAVVCCISEPSADYAAEITQSLKKQGFRVESDL-RGEKITRKI 586

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIK 448
           +    +  P  ++ G  E+  G + ++
Sbjct: 587 REHSLQKVPYILVVGDKEKQNGTVAVR 613


>gi|304309881|ref|YP_003809479.1| Threonyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301795614|emb|CBL43813.1| Threonyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 647

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 33/114 (28%), Gaps = 7/114 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   I  ++   +R +Y   G+  +  P +   D  L K     +   + +F 
Sbjct: 273 GMVFWHPKGWAIWQKVEQYVRKVYRESGYQEVRGPQI--LDVSLWKKSGHWENYQENMF- 329

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP--VFRNEKHGPGR 124
             + + +  +++        +    N                   RNE  G   
Sbjct: 330 FTESEKRTYAVKPMNCPGHVQIY-NNTLHSYRELPIRYAEFGGCHRNEPSGALH 382



 Score = 43.7 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +       D+    +     L+ AGI+AE  L  ++  G +++       P   
Sbjct: 547 WLSPVPVVVATITDDARDWAETVVAQLKAAGIQAEADL-RNEKIGYKVREHSNAKIPQIW 605

Query: 434 IQGTGERSRGMLQIKDLAKGKELSR 458
           + G  E +   + I+ L   ++   
Sbjct: 606 VVGKQEAAEQKVAIRRLGS-QQNEV 629


>gi|291299271|ref|YP_003510549.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290568491|gb|ADD41456.1| prolyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 562

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        IR+R +I+  IR   +  G      P +  ++         D     
Sbjct: 34  QLAAGHYSLLPLAIRVRAKIMAVIREELDRIGAQEFLLPAMHPAEI-WHASGRWDVMGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +F L+D  G  ++L
Sbjct: 93  MFRLKDRKGAQLAL 106



 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 37/124 (29%), Gaps = 21/124 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               N+      ++     D +     +   + L    +   +        G +L   + 
Sbjct: 459 KWPVNVAPYTVAVVMMSTKDDEVRQAAENLYRQLSDTDV---ILDDRDARPGAKLTDVEL 515

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  +  G      G ++I   A G+                    T+P++E  + V+
Sbjct: 516 VGIPFRVTVGARGLKTGSVEITSRATGE------------------TETVPVAEAAARVR 557

Query: 487 KILQ 490
            +L+
Sbjct: 558 DLLK 561


>gi|218897336|ref|YP_002445747.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218542902|gb|ACK95296.1| threonyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 640

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 66/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVVPVS-NAVHEQYCSEVAHKLAKAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S  + 
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYFLVIGDKEMESGAVNVR--KYGEEKSEVVA 623


>gi|228900981|ref|ZP_04065194.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228858679|gb|EEN03126.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 640

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 66/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVVPVS-NAVHEQYCSEVAHKLAQAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S  + 
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYFLVIGDKEMESGAVNVR--KYGEEKSEVVA 623


>gi|228965357|ref|ZP_04126449.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228794347|gb|EEM41861.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 640

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 66/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVVPVS-NAVHEQYCSEVAHKLAKAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S  + 
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYFLVIGDKEMESGAVNVR--KYGEEKSEVVA 623


>gi|228476027|ref|ZP_04060735.1| glycine--tRNA ligase [Staphylococcus hominis SK119]
 gi|314936314|ref|ZP_07843661.1| glycine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|228269850|gb|EEK11330.1| glycine--tRNA ligase [Staphylococcus hominis SK119]
 gi|313654933|gb|EFS18678.1| glycine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 463

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/219 (7%), Positives = 51/219 (23%), Gaps = 4/219 (1%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  + +       +  +                   K            +   ++     
Sbjct: 248 QWLKDLNINEENMRLRDHDEEELSHYSN-ATTDIEYKFPFGWGELWGIASRTDFDLKKHS 306

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               E  +     +      Y    S    +   A          +   K   +  +   
Sbjct: 307 EHSGEDFRYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVMHFHP 366

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P     +        +     + L ++    +     S++ G + +  D    P  I
Sbjct: 367 ALAPYKAAILPLSKKLSEEAIKIFEQL-SSKFSVDFD--ESQSIGKRYRRQDEIGTPYCI 423

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + ++D    +++   I   E++   +V 
Sbjct: 424 TFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAEKVK 462


>gi|154687027|ref|YP_001422188.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166223321|sp|A7Z7I1|SYT_BACA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|154352878|gb|ABS74957.1| ThrS [Bacillus amyloliquefaciens FZB42]
          Length = 643

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 81/261 (31%), Gaps = 28/261 (10%)

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            ++  +  D   + +      +     EK F++  + ++         + +        G
Sbjct: 406 RLIQDVYEDFGLNDYTFRLSYRDPEDTEKYFDDDEMWNKAQSMLKAAMDEMGHDYYEAEG 465

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-----SI 353
              + G   +  +   +  E+    V        R+D       G+            S 
Sbjct: 466 EAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYVGEDGKQHRPVVIHRGVVST 525

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               +   ++  + +           +  +   S  L   +   + L+  G+R E+    
Sbjct: 526 MERFVAFLIEEHKGALPTWLAPVQFQVIPVSP-SVHLDYAKKVQERLQREGLRVELD-SR 583

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +  G +++ A  +  P  ++ G  E   G + ++    G++ S                
Sbjct: 584 DEKIGYKIREAQMQKIPYMLVVGDQEAENGAVNVR--KYGEQKS---------------- 625

Query: 474 ITIPISELVSTVKKILQENKE 494
            T+ + + V   KK + E K+
Sbjct: 626 ETVSLDDFV---KKAVAEAKK 643



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G++ + TP+L   D         D     +F  
Sbjct: 265 GLPLWLPKGATIRRVIERYIVDKELSLGYEHVYTPVLGSKDLYETS-GHWDHYQDTMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D + + LR             +         +YR  P+   E     R+  
Sbjct: 324 MEMDNETLVLRPMNCP-------HHMMIYKQDIHSYRELPIRIAELGTMHRYEM 370


>gi|91223451|ref|ZP_01258716.1| prolyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269966231|ref|ZP_06180320.1| prolyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|91191537|gb|EAS77801.1| prolyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269829146|gb|EEZ83391.1| prolyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 571

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D +      D +     K  D        
Sbjct: 146 RFGVMRSREFSMMDAYSFDIDKDGLQKSYDAMHDAYCKAFDRMGLDYRP 194



 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L   GI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSEEVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G  + K+ A G++ +  + +     +A+
Sbjct: 540 KEGNFEYKNRATGEKTAVAMTDIVEHVKAQ 569


>gi|326318382|ref|YP_004236054.1| prolyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323375218|gb|ADX47487.1| prolyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 581

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 43/115 (37%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++ +L  G  +     +R+  ++   +R      G   +  P+++ ++   +  
Sbjct: 26  MTRAGLIK-KLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVEVTMPVVQPAE-FWQET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              D+    +  ++D  G+   ++    ++   +AR    ++  +       +  
Sbjct: 84  GRFDKMGPELLRIRDRHGRDFVVQPTSEEVVTDIARQELRSYKQLPKNLYQIQTK 138


>gi|253995828|ref|YP_003047892.1| prolyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982507|gb|ACT47365.1| prolyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 573

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 48/168 (28%), Gaps = 9/168 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++  L  G        +R+  ++   +R    N G   +  P ++  + L +  
Sbjct: 26  MVRAGLIK-RLGSGLYSWMPLGLRVLRKVERVVREEMNNAGALELLMPAVQPKE-LWEET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP---- 113
                    +  +QD   +         ++   +AR    ++  +       +       
Sbjct: 84  GRWAVFGPQMLKIQDRHEREFCFGPTHEEVITDIARKEIRSYKQLPLNFYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
             R        F            +S E     M    ++    +G+K
Sbjct: 144 RPRFGVMRAREFMMKDAYSFHTDFASLEQTYDTMYQAYSNVFTRLGLK 191



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 38/128 (29%), Gaps = 21/128 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V+I  + +D      +  +     L+ AG+   +     +  G  
Sbjct: 464 DERGIIFPKSMAPFEVVICAIGYDKSEAVQAATKKLHDELQAAGVDVLLD-DRGERPGVM 522

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
              AD    P  ++ G    + G ++ K                     +    ++ ++ 
Sbjct: 523 FAEADLMGIPHRLVIGERGLNEGNVEYK------------------ARTQADAQSVALAS 564

Query: 481 LVSTVKKI 488
           +V  V+K+
Sbjct: 565 VVEFVQKL 572


>gi|145588388|ref|YP_001154985.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189083506|sp|A4SVA7|SYP_POLSQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145046794|gb|ABP33421.1| prolyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 580

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/153 (9%), Positives = 46/153 (30%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +++  ++ + IR      G   +  P+++ ++ L +     ++    +  +
Sbjct: 38  GIYNYLPLGLKVIRKVENIIREEMNRAGAIELLMPMIQPAE-LWQETGRWEKMGPELLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
           +D   +   ++    ++   LAR    ++  +       +                  F 
Sbjct: 97  KDRHDRDFLIQPTSEEVITDLARNEIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFS 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D      + +   M        + +G
Sbjct: 157 MKDAYSFDRDTEGLKKSYQTMFEAYTQIFKRMG 189



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 24/88 (27%), Gaps = 3/88 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSD--SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V+I  M ++      +        L  AGI   +   + +  G  
Sbjct: 463 DERGIIWPISMAPVEVVICPMGYEKSEPVKAACDQLHDELVAAGIDVILDDRNER-PGAM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +    P  ++ G    +   ++ K
Sbjct: 522 FADWELIGAPFRVVIGDRGLADSQVEFK 549


>gi|87198229|ref|YP_495486.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|123749972|sp|Q2GBX1|SYT_NOVAD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|87133910|gb|ABD24652.1| Ser-tRNA(Thr) hydrolase [Novosphingobium aromaticivorans DSM 12444]
          Length = 664

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 52/481 (10%), Positives = 126/481 (26%), Gaps = 103/481 (21%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R   +  G+  ++TP +  +    +      +  + +F +
Sbjct: 269 GSVFWHPKGYLIWRELEAYMRRAIDGAGYREVKTPQVMDARQ-WEQSGHWGKYRENMFVI 327

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D+                                    P   +E             D 
Sbjct: 328 PDE-----------------------------------VPNVDDEGP-----IVSNDADW 347

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +      A   +      +   + ++   Y  G  +R    G L  +      +  + 
Sbjct: 348 MALKPMNCPAHVLIFRQGIKSYRELPLRL--YENGCCHRNEPHGALHGLMRV--RQFTQD 403

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +      +Q    L           ++    L  E+            E+   
Sbjct: 404 DAHIFCREDQIVSEVQAFCELADRIYKHFGFTYSIKLALRPEKR--------FGTEEMWD 455

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +    ++  +       E     EL  +  + + +++   T   G  +  G +    +  
Sbjct: 456 KAERELRDAVVRAGLATEEYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLP 515

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             ++                      + +   +    F      + + ++          
Sbjct: 516 ERLDASYIGED-------------GEKHRPVMLHRAIFGSYERFIGILIEHFAGRLPVWL 562

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYAD 425
                ++ T+  D+D     +     L+ AGIRA+  L + K        +         
Sbjct: 563 APVQAVVATIVSDAD--DYARDALAKLKAAGIRADTDLRNEKINYKVREHSLQK------ 614

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
               P  ++ G  E   G + I+ L  G++                 Q  +P+ E ++ +
Sbjct: 615 ---VPYLLVVGKREAEEGTVAIRIL--GEQ----------------HQKVMPLDEAIALL 653

Query: 486 K 486
           K
Sbjct: 654 K 654


>gi|310780470|ref|YP_003968802.1| tRNA synthetase class II (G H P and S) [Ilyobacter polytropus DSM
           2926]
 gi|309749793|gb|ADO84454.1| tRNA synthetase class II (G H P and S) [Ilyobacter polytropus DSM
           2926]
          Length = 363

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 142/394 (36%), Gaps = 52/394 (13%)

Query: 24  RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG-VFSLQDDDGQWIS 82
           R     +  +  ++E+YG+D I     E  ++   +  ++D   +G +  + +  G    
Sbjct: 5   RKEEEFVMDLEKVFESYGYDKIRLNAFERYET---YFENKDIIREGNLLKIINPKGDLYV 61

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           LR D+T P+ +Y ++           +               F +  Q  ++ +G     
Sbjct: 62  LRPDMTLPVVKYFSDTQANRGK----FYYNDSVFRTDKKGLGFGERKQVGIEYLGGENIL 117

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
           +D E+  +   TLE +     +Y + I++ + +  ++  I    + +      + R    
Sbjct: 118 SDVEVLDLAVQTLEKL---DENYLLCISHTEFIKEMVNSISEDQEIRNQILDYLYR---- 170

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                   ++  L +   D              Q+  +  F     ++   +    +  T
Sbjct: 171 ----RSSDLESYLNKLGVDQKKI---------SQVTKLNLFFGNFEKE--KDTLYEMAVT 215

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              +K   +L +I + + K  Y  +RIK+  +I   L+YY G +++  +           
Sbjct: 216 EKQKKILEDLEMILKALNK-KYPQDRIKVDFSISVALDYYNGLIFKGYISEIRK------ 268

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                +  GGRYD LV RF  ++  A GF + I     ++K              +    
Sbjct: 269 ----PILSGGRYDTLVKRFG-KDASALGFCVEIDNYFDSIKREG---------TKIDYLF 314

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           +  D +S  +     + +R  G    + L   K+
Sbjct: 315 LYSDIESGFEAMEKAREMRKHGKTVRV-LSEDKS 347


>gi|261855919|ref|YP_003263202.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836388|gb|ACX96155.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 637

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 7/114 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   +   I   +R IY + G+D I  P +   D  L K     D   + +F 
Sbjct: 261 GLVFWHPKGWALWQVIEQHMRGIYRSSGYDEIRCPQI--LDVSLWKKSGHWDNYQENMF- 317

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
             + + +  +++        +    +               G   RNE  G   
Sbjct: 318 FTESEKRTFAVKPMNCPGHVQVF-NHGLHSYRDLPIRYGEFGSCHRNEPSGALH 370



 Score = 40.2 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 5/147 (3%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S  +   +        + R I  L    +       + P+ +  M       
Sbjct: 493 GATYVDEHSERRHPVMLHRAIVGSMERFIGILIEHHAGMLPFW-LAPIQVVVMGITDKHA 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              Q  T  L+ +GIR    L  ++  G +++       P  ++ G  E     + ++  
Sbjct: 552 GYVQQLTAKLKASGIRVVEDL-RNEKVGFKIREHTLERVPYLLVAGDREMETESIAVR-- 608

Query: 451 AKGKELSREIKNNESWREARVAQITIP 477
              +     +       E   ++   P
Sbjct: 609 -TREGTDLGVMAVTDLLEKLQSESRAP 634


>gi|149371736|ref|ZP_01891152.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified
           eubacterium SCB49]
 gi|149355363|gb|EDM43923.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified
           eubacterium SCB49]
          Length = 647

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + + L+    +         V I ++          +    +L
Sbjct: 512 HRPVMIHRAPFGSLERFVAILLEHTGGNFPLWLMPEQVAILSLS--EKYEEYAEKVLNLL 569

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               IRA +    ++  G +++ A+    P  +I G  E + G + ++
Sbjct: 570 ENHDIRALVD-NRNETIGKKIREAEMNKIPYMLILGEQEENDGTISVR 616



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 83/282 (29%), Gaps = 21/282 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS------LGKFLPDEDRPN 67
           G      K   +R R+ + ++   +  G++ + TP +   +         K+  D  +  
Sbjct: 262 GLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHIGNKELYVTSGHFAKYGEDSFQVI 321

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
                   +DG+   L+             + +       +Y+  P    E     R+ Q
Sbjct: 322 N-----TPNDGEEFMLKPMNCP-------HHCEIYNAKPMSYKDLPKRLAEFGTVYRYEQ 369

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             +           T D        D L+    K  D  + +      +    ++ +   
Sbjct: 370 SGELH-GLTRVRGFTQDDAHIFCTPDQLDEEFKKVIDLVLYVFGSLGFEKFTTQVSIRDM 428

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            K  + +  +   +K +   L  VK    +   +       G  L     D +     + 
Sbjct: 429 SKPEKYIGDVSTWEKAENAILNAVKDKGLDYIVEEGEAAFYGPKLDFMVKDALGRSWQLG 488

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
             +  + L E  +  +  +   NEL     + R    +  R 
Sbjct: 489 TIQVDYNLPERFE--LTYKGSDNELHRPVMIHRAPFGSLERF 528


>gi|13542219|ref|NP_111907.1| glycyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|14325653|dbj|BAB60556.1| tRNA synthetase Gly [Thermoplasma volcanium GSS1]
          Length = 476

 Score = 57.5 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/476 (9%), Positives = 119/476 (25%), Gaps = 50/476 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF D       +++ I+   +  Y   G   ++TP++  +D        E         
Sbjct: 27  SGFYDYGPLGTLLKDNIISIWKKSYAKEGAIFLDTPVIAPADVFKASGHLE--------K 78

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             D     I+++ +                      Y++  + ++               
Sbjct: 79  FSD-----IAVKCE-----------------KCKTAYKLENLLKSVGIDVPLNNVEKANA 116

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           V                   +      +  N+ ++     + +    + +  +  + +  
Sbjct: 117 VLEEYDVKCPKCGAPLRGAYEFNLMFKVGTNELYLRPETAQGIFINFKNLYNYSRNTMPI 176

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            +  +    + +    Q +  +    + +    +   ++       +    L    E+  
Sbjct: 177 IVCQVGKGFRNEISPRQALIRMREFTQAEVEVFYLNDSDFNPNGNSLKFKLLRNTGEEVT 236

Query: 253 HELYELVKGTIAGEKGFNE-LVVISELVRKSGYNSNRIKISSTIV--RGLEYYTGCVYEA 309
            +L E +   I         L     ++   G+N N ++        R         +E 
Sbjct: 237 VDLKEALHSGIVKNPVMAYFLEKTYSILSSIGFNPNHLRAREHDPLERAHYSSETWDFEY 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKS--- 364
           ++    +             G  +     +     N+P            ++  L     
Sbjct: 297 LMDGEWIEIVGVSDRGTYDLGRHQQFSGENMEVDGNIPRVVEPSYGIDRIVLTILNDGYY 356

Query: 365 ------LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                      +         +  +       +K +     ++   I   ++     N G
Sbjct: 357 IRDNGYKVLKLDPAVSPLHFAVFPLQRRDGLDAKAKELFNKIKQ--IDPFVYYDEGGNIG 414

Query: 419 NQLKYA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              +YA  D    P  I           + I++    K++   I+           
Sbjct: 415 R--RYARQDEIGTPFCITVDYETLEDSTVTIRERDSTKQVRENIEELLQKISDYPE 468


>gi|320159528|ref|YP_004172752.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319993381|dbj|BAJ62152.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 623

 Score = 57.2 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/364 (9%), Positives = 100/364 (27%), Gaps = 28/364 (7%)

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            ++   AE+    M +               + I  +  +    +  ++  +G     E+
Sbjct: 287 GHLPYYAESMYPPMELEGVRYYVKPMNCPMHHKIFASKPRSYRELPVRLAEYGTCYRYEK 346

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L  + ++    +    +   E + +          L   ++  +  +L         
Sbjct: 347 SGELFGLMRVRSMQMNDSHIYCSEEQFEQEFVGVIHLYLEYFRLFGIQDYLMRLSTHHPR 406

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS-TIVRGLEYYTGCVYEAILG 312
            L +         +   ++V   + +  +G     I   +      ++        AI  
Sbjct: 407 GLGKKYVNNPELWRKTEDMVR--KALDNNGIPYVEIADEAAFYGPKIDVQVKS---AIGR 461

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              +   Q              +      +   +     S     +   L+    +    
Sbjct: 462 EFTLATNQVDFAQPERFDLKFINEKGEEERPLIIHRAPLSTHERLIGFLLEHYAGAFPVW 521

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V I  +    +     +   + LR   +RA   L S +    +++ A     P  
Sbjct: 522 LSPEQVRIIPITDAQN--EYAKQLERRLRALEVRATADLDSDR-MNAKIRKAQLLKIPYM 578

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           ++ G  E   G + ++                   +    Q T+ + E V+ +++ +   
Sbjct: 579 LVVGEREAQAGAVALR-------------------KRDGTQQTLSVDEFVALLQEKISTR 619

Query: 493 KEEI 496
             ++
Sbjct: 620 AADL 623



 Score = 37.1 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 8/169 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   I   I    + +   YG++ + TP L   D   +         + ++  
Sbjct: 241 GLPLWTPRGGAIIEEIEKLAKEMEFKYGYERVRTPHLAKEDLYLRS-GHLPYYAESMYPP 299

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG------PGRFR 126
            + +G    ++        +  A    +    P R    G  +R EK G        R  
Sbjct: 300 MELEGVRYYVKPMNCPMHHKIFASKPRSYRELPVRLAEYGTCYRYEKSGELFGLMRVRSM 359

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           Q     +       E     +  +  +     GI+     +  ++ + L
Sbjct: 360 QMNDSHIYCSEEQFEQEFVGVIHLYLEYFRLFGIQDYLMRLSTHHPRGL 408


>gi|332978157|gb|EGK14892.1| proline--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 576

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 46/157 (29%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +++  ++   +R   +N G   +  P+ + ++   +    ED     
Sbjct: 34  KLASGLYVWLPMGLKVLQKVEKIVREEMQNIGAQEVLMPMTQPAELWQESGRFED-YGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +    D   +   L     ++   LAR    ++  +          +R     R      
Sbjct: 93  LLRFTDRHNRDFVLGPTHEEVITDLARGELRSYKQLPVTFFQIQGKFRDEIRPRFGIMRA 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F            +S E    +M        + +G
Sbjct: 153 REFTMKDAYSFHVDQASLEITYQQMYDAYTRIFQRLG 189


>gi|269792334|ref|YP_003317238.1| threonyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099969|gb|ACZ18956.1| threonyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 631

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 3/84 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P GF     K + I N ++D  +  ++  G++ I TPL+       +     D  
Sbjct: 252 IQPEGP-GFPFFHPKGMVILNELVDFWKREHKRRGYNEIRTPLILDRSLWERS-GHWDHY 309

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
              ++     D +  +++      
Sbjct: 310 RDNMY-FTSIDDRPFAIKPMNCPG 332



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 2/142 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
              Y G         +        + R +  L    +       + PV +  +    +  
Sbjct: 490 DVSYVGADGADHRPVMIHRTVFGSLERFLGILIEHYAGAFPFW-LAPVQVRVLPVKPEFE 548

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
            + +     L++ G+R E+ +   K  G +++ A     P  I+ G  E   G + ++  
Sbjct: 549 DRSRQVEAALKSWGVRVEVDVRDEK-LGKKIRDAQLSKVPYMIVIGAKEAETGGVSVRHR 607

Query: 451 AKGKELSREIKNNESWREARVA 472
           + G   +  +       +    
Sbjct: 608 SDGDLGTMSMDVLRDRLQGEFK 629


>gi|229815156|ref|ZP_04445493.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM
           13280]
 gi|229809386|gb|EEP45151.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM
           13280]
          Length = 595

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 3/84 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R E P GF       + ++N +LD  R I+   G+  I TP +             D  
Sbjct: 216 MRDEAP-GFPFFLPNGMVLKNTLLDYWREIHHKAGYVEISTPQIMNKSLWLTS-GHWDHY 273

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
              ++S    D +   ++      
Sbjct: 274 KDNMYSTMI-DDEEYCIKPMNCPG 296



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 65/239 (27%), Gaps = 10/239 (4%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     LT E + ++    S+  +       EL            +     E
Sbjct: 339 FNQDDAHLFVTPEQLTDEIVGVVRLIDSVYQKFGFKYHVELSTRPEDSMGSDEDWAAAEE 398

Query: 278 LVR-KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-D 335
            ++           ++               E  LG        +            Y D
Sbjct: 399 GLKVALDKLGMDYVVNEGDGAFYGPKIDFHLEDSLGRTWQCGTVQLDFQMPQNFDLTYVD 458

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
               + +   +    F      + + ++              V +  +     S      
Sbjct: 459 ADGEKKRPIMLHRVCFGSIERFIGILIEHYAGKFPVWLAPMQVKVLPVS--EKSRDYAHQ 516

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYA---DRRNCPLAIIQGTGERSRGMLQIKDLA 451
            T+ L  AGIR        +  G +++ A   DR   P  +I G  E   G + ++D +
Sbjct: 517 VTEQLEAAGIRVVCD-DRDEKIGYKIREARGVDR--VPYMLILGEKEVEAGNISVRDRS 572


>gi|68070445|ref|XP_677134.1| threonine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56497130|emb|CAH95381.1| threonine--tRNA ligase, putative [Plasmodium berghei]
          Length = 780

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 56/480 (11%), Positives = 130/480 (27%), Gaps = 60/480 (12%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF        +I N++++ +R  Y    ++ + TP +   D L K           +F 
Sbjct: 348 SGF--WFAHGAKIYNKLIEFMRKEYRIRKYEEVITPNIFSCD-LWKTSGHYQNYKNCMFI 404

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
              ++ +W  ++             +         +Y+  P+   +     R        
Sbjct: 405 FNIENKEW-GMKPMNCPG-------HCLIFKQLNASYKSLPIRLADFGVLHRNEITGSLS 456

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                   +  DA +      +L+ +  +  +    I     L G    + L        
Sbjct: 457 GLTRVRRFQQDDAHIFC----SLDHIKTEVVNVLQFIFFVYNLFGFKYDLYLSTRPPKYI 512

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             I                +  L E     + ++       +     +   L   L +S 
Sbjct: 513 GDIDT----------WNFAEKSLKEALELANVEWKLNEGDGAFYGPKIDIVLKDSLNRSH 562

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                 +           +L +   L  K+       +  S +V           E    
Sbjct: 563 QCGTVQLDF---------QLPIRFNLQYKNKEYGVGQETDSNLVNDSNIDPIEKKEDSTL 613

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
             + N +       +      +D  +       +           + + ++         
Sbjct: 614 ENIDNNEDAINSQSTAILKKGFDRPII------IHRAILGSVERFVAILVEHTSGKFPFW 667

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 ++  +    +  +KY     +L       ++ +  +     +++ A  +     
Sbjct: 668 LSPRQAIVLPISDKFNEYAKY--IHNVLTNNLFDVDVDISVN-TLNKKIREAQLKQYNFI 724

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           ++ G  E S   + ++D                 R+    Q    I ELV+T KK+L  N
Sbjct: 725 LVVGEKEISTNTVTVRD-----------------RDNPNDQKVYTIQELVNTFKKMLDIN 767


>gi|304406649|ref|ZP_07388304.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304344182|gb|EFM10021.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 645

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 70/258 (27%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R  +   I ++ E  G+  + TP+L   +   K     +  ++ +F  
Sbjct: 265 GLPLWLPNGARVRRTMERYIVDLEERLGYSHVYTPVLANVELY-KISGHWEHYSEDMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +        R+YR  P+   E     R+        
Sbjct: 324 MALDNEELVLRPMNCP-------HHMMVYKSDMRSYRDLPIRVAELGTMHRYEMSGALT- 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                 A T +        D ++    +  +    +     +     ++         + 
Sbjct: 376 GLHRVRAMTLNDAHIFCRPDQIKEEFARVINLIRQVYADFGIKEYRFRLSYRDPQDTEKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +   +   + V+ L              G  L  +    +    ++   +   
Sbjct: 436 FPDDNMWEMSQRMLREVVEELELPFFEAEGEAAFYGPKLDVQIKTALGKEETLSTAQLDF 495

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  +    G+ G   
Sbjct: 496 LLPERFELEYVGDDGKKH 513



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 1/95 (1%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +   S      +   + L  AG+RAE  L  ++  G +++ A     P  +I G  E  
Sbjct: 552 VIPVSSAYDGYAREVEEKLLAAGVRAESDL-RNEKLGYKIREAQLEKLPYMLIVGDNEAQ 610

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            G + ++   +G   S+E+    +     +A   +
Sbjct: 611 AGTVSVRKRGEGDIGSKEVSELIALLTEEIATKKV 645


>gi|116669968|ref|YP_830901.1| prolyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|152074746|sp|A0JUT1|SYP_ARTS2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116610077|gb|ABK02801.1| prolyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 603

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 32/99 (32%), Gaps = 1/99 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +             V +  +    +  +  +  +  L  AG+          + G +  
Sbjct: 493 DAKGLVWPRAVAPADVHVVAVGRGEEIFAAAEQLSLELEAAGLEVIYDDRPKVSPGVKFG 552

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            A+    P  +  G      G+++IKD   G+  +  ++
Sbjct: 553 DAELIGVPTILAVG-RGLVDGVVEIKDRRSGEAENVAVE 590



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        + +  ++   IR      G   +  P L   E  ++  ++        +G+
Sbjct: 40  GIYTWLPLGLSVLRKVEKVIREEMAAIGAQEVHFPALLPKEPYEATNRWTE----YGEGI 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 96  FRLKDRKGGDYLLAP 110


>gi|306831875|ref|ZP_07465030.1| threonine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425801|gb|EFM28918.1| threonine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 648

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/388 (9%), Positives = 104/388 (26%), Gaps = 18/388 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +          P+   + +         + D+       +  +  +  M  
Sbjct: 279 RYIVDK--EVASGYLHVYTPPLASVDLYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +       D  +  NLT E    +      D  K   +           +   +E+
Sbjct: 397 EEFQKALQL-IIDVYEDFNLT-EYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            V                            T    +     P           G      
Sbjct: 455 GVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADGE----- 509

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                    +   +     S       + +++ + +         V +  + +++  +  
Sbjct: 510 -------EHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTVIPVSNEA-HVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                ++LR  G+R ++    ++    +++ +  +  P  +I G  E +   + ++    
Sbjct: 562 AWEVAKVLRDKGVRVDVD-ERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGS 620

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
            +  +  I        A + + + P +E
Sbjct: 621 KQTHTEAIDEFVDNILADINRKSRPDAE 648


>gi|315453307|ref|YP_004073577.1| threonyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132359|emb|CBY82987.1| threonyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 612

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           PV +  +   +D     Q     LR AGI AE+    +++   +++  +++  PL  + G
Sbjct: 514 PVQVALVPISADQHDYAQDLCTQLRHAGIFAEVA-NKNESLAKRIRTLEKQKVPLIAVIG 572

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             E     L I+D A G++ + + K   +  + ++ +++
Sbjct: 573 AKETQENALAIRDRALGEQYTMDSKEFINMCQEKMQEVS 611



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 30/109 (27%), Gaps = 3/109 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+R RI D +       G++P+  P +    SL K     +   + ++  
Sbjct: 238 GLPIWLPNGMRLRKRIEDLLSVALLRSGYEPVRGPEI-LKSSLWKISGHYENYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
              D     ++        +   ++                  +     
Sbjct: 296 TTIDEVEYGIKPMNCVGHIKVY-QHALRSYRDLPLRFYEYGVVHRHEQS 343


>gi|260662303|ref|ZP_05863199.1| prolyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553686|gb|EEX26578.1| prolyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 573

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 4/98 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+  +I   IR   +  G   I  P L  +D L K     D     +F L+D  
Sbjct: 42  YLPLAYRVIRKIEQIIREEMDKAGAVEILLPGLLPAD-LWKESGRYDAYGDNLFKLKDRR 100

Query: 78  GQWISLRY--DLTA-PLARYVAENFDTIVFPCRTYRIG 112
            +   L    + T   + R    ++  +       +  
Sbjct: 101 ERDFILGPTHEETVTSILRDAIHSYKKLPLVVYQLQDK 138



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 8/130 (6%)

Query: 350 GFSIGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IG+SRL+ A+    +          +      +I       D ++  +  T  L  A
Sbjct: 443 CYGIGVSRLLSAISEQNADENGLVWPQAVAPFDIHVIPVNAKKEDQMAMAEEITANLEEA 502

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G    +     +  G +   AD    P+ +  G      G+++IK    G+ L    +  
Sbjct: 503 GYEVLVDDRKERA-GVKFADADLIGVPIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEEL 560

Query: 464 ESWREARVAQ 473
            +     + Q
Sbjct: 561 ATNIAILLKQ 570


>gi|254229498|ref|ZP_04922912.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393498|ref|YP_003285352.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937963|gb|EDN56807.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262337092|gb|ACY50887.1| prolyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 571

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D +      D +     K  D        
Sbjct: 146 RFGVMRSREFSMMDAYSFDIDKDGLQKSYDAMHDAYCKAFDRMGLDYRP 194



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L   GI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSEEVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G  + K+ A G++    + +     +A+
Sbjct: 540 KEGNFEYKNRATGEKTPVAMTDIIEHVKAQ 569


>gi|288905772|ref|YP_003430994.1| Threonyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325978807|ref|YP_004288523.1| threonyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732498|emb|CBI14070.1| Threonyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325178735|emb|CBZ48779.1| threonyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 648

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/388 (10%), Positives = 102/388 (26%), Gaps = 18/388 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +          P+   + +         + D+       +  +  +  M  
Sbjct: 279 RYIVDK--EVASGYLHVYTPPLASVDLYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVYKHHVHSYRELPIRIAEIGMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +       D  +  NLT E    +      D  K   +           +   +E+
Sbjct: 397 EEFQKALQL-IIDVYEDFNLT-EYRFRLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               E     G  +         V+        +    L F +                 
Sbjct: 455 --GVEYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFGL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L                +      +   +  
Sbjct: 502 TYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTVIPVSNEAHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                ++LR  G+R ++    ++    +++ +  +  P  +I G  E +   + ++    
Sbjct: 562 AWEVAKVLRDKGVRVDVD-ERNEKMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGS 620

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
            +  +  I        A + + + P +E
Sbjct: 621 KQTHTEAIDEFVDNILADINRKSRPDAE 648


>gi|255994452|ref|ZP_05427587.1| threonine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993165|gb|EEU03254.1| threonine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 581

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +R  + +  R  +   G+D I+TPL+  S+ L       D   + ++  
Sbjct: 207 GFPFFLPNGMILRTELENYWRQEHRKRGYDEIKTPLI-LSEELWHTSGHYDHYKENMY-F 264

Query: 74  QDDDGQWISLRYDLTAPLA 92
              D    +++        
Sbjct: 265 TSIDDAEYAIKPMNCPGAM 283



 Score = 41.0 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 1/94 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +      +   +  ++ L   GIR ++    ++  G +L+           + G  
Sbjct: 485 QVRLLTVTEKFVPYAEKVSKELAKHGIRVKVD-ARNEKIGYKLRQGRNERVSYLAVIGER 543

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           E     L ++   +G   S  I          +A
Sbjct: 544 EAEADTLSVRSSKEGDLGSLSIDKFIDALCDEIA 577


>gi|330720665|gb|EGG98912.1| Prolyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 576

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 43/160 (26%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  +  + IR      G   +  P ++ ++ L +      + 
Sbjct: 31  MIRRLAAGLYTWSPLGLRVLRKSENIIREEMNRAGALELLMPAVQPAE-LWEETGRWGQF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D  G+   +     ++   LAR    ++  +       +             
Sbjct: 90  GDELLRVKDRHGREFCIGPTHEEVITDLARNELSSYKQLPVNFYQIQTKFRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M        E +G
Sbjct: 150 MRSREFLMKDAYSFHLDAESLQQTYDAMYRAYCRVFERMG 189



 Score = 39.8 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 32/127 (25%), Gaps = 21/127 (16%)

Query: 366 ESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLK 422
                       V I  M++D             Q L+  GI   M     K + G +  
Sbjct: 466 GIIWPAGLAPFQVGIVPMNYDKSEQVKETANRVYQELKELGIDVYMDDRDKKTSPGVKFA 525

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
             D    P  I+          +                  E        +  +   +++
Sbjct: 526 DMDLIGIPHRIVISDRGLKENQI------------------EYQERRSQERQNLAADQVI 567

Query: 483 STVKKIL 489
           + +K+ L
Sbjct: 568 AFIKETL 574


>gi|311064400|ref|YP_003971125.1| threonyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|310866719|gb|ADP36088.1| ThrS Threonyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 676

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/404 (10%), Positives = 106/404 (26%), Gaps = 50/404 (12%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDADGNITKPGADYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   L+   +++           S  +  + V      E+ 
Sbjct: 417 EQMKDELTSLLTFVL-NLLKDFGLSDFYLEL-----------STKDPDKYVGSDEIWEEA 464

Query: 269 FNELVVISE--LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
              L  ++E   +               I        G  ++        N  ++     
Sbjct: 465 TRTLREVAEASHLDLVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPER----- 519

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                       +  +   +    F        V L+    +      + PV +  +   
Sbjct: 520 --FQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVA 575

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +       + + L    +R E+     + FG +++ A +   P  +I G  + +   + 
Sbjct: 576 DEFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVS 634

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
            +    G +L+                  +P+ E    +  +++
Sbjct: 635 FR-FRDGSQLNG-----------------VPVDEAREKILAVIK 660


>gi|146341083|ref|YP_001206131.1| prolyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166980103|sp|A4YVI0|SYP_BRASO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146193889|emb|CAL77906.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Bradyrhizobium sp. ORS278]
          Length = 444

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++  +I   +R      G   +  P L+ +D L +     D     +  +
Sbjct: 38  GIYAWLPLGFKVLKKIEQIVREEQNRAGALELLMPTLQLAD-LWRESGRYDAYGPEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRI----GPVFRNEKHGPGRFR 126
            D   + +       ++   + R   +++  +       +         R        F 
Sbjct: 97  SDRHKRELLYGPTNEEMITEIFRAYVKSYRNLPLNLYHIQWKFRDEQRPRFGVMRGREFL 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
                  D   + A  A  +M +    T   +G+K     
Sbjct: 157 MKDAYSFDLDEAGARRAYNKMFVAYLRTFARMGLKGIPMR 196


>gi|258647088|ref|ZP_05734557.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260853035|gb|EEX72904.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 647

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 49/138 (35%), Gaps = 3/138 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F        V ++               +I  +    +         
Sbjct: 510 SKKHRPVMIHRAPFGSLERFTAVLIEHTGGHFPLWLMPDQCVILPISERFN--DYAHKVK 567

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L  AGIRA +    ++  G +++  + ++ P  ++ G  E++ G + ++   +G + +
Sbjct: 568 EQLEAAGIRANID-ERNEKVGRKIRDNEMKHIPYLLVVGEKEQADGSVNVRKQGEGTQET 626

Query: 458 REIKNNESWREARVAQIT 475
             I          VA++T
Sbjct: 627 MTIPMFAEKVLKEVAELT 644



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 79/261 (30%), Gaps = 11/261 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R +++  +R I + +G+  + TP +   +          +  K  F 
Sbjct: 262 KGLPIWLPKGTVLRQQLMSFLRKIQKRFGYMEVITPHIGSKNLYVTS-GHYAKYGKDSFQ 320

Query: 73  L--QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
                ++G+   L+             +     +   +Y+  P+   E     R+ Q  +
Sbjct: 321 AIHTPEEGEEYMLKPMNCP-------HHCAVYSWQPHSYKDLPLRIAEFGTVYRYEQSGE 373

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                        DA +        +   ++  D  + +      +    +I L    K 
Sbjct: 374 LHGLTRVRGFTQDDAHIFCRPDQVKQEF-LRVMDIIMIVFRALNFEQFEAQISLRDKVKR 432

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            + +      DK ++  ++  +    + + +       G  L     D +     +   +
Sbjct: 433 EKYIGSDDVWDKAEQAIIEACEEKGLQAKIEYGEAAFYGPKLDFMVKDALGRRWQLGTIQ 492

Query: 251 SMHELYELVKGTIAGEKGFNE 271
             + L E  +    GE     
Sbjct: 493 VDYNLPERFQLEYTGEDSKKH 513


>gi|242242946|ref|ZP_04797391.1| threonyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233547|gb|EES35859.1| threonyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 645

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/371 (10%), Positives = 95/371 (25%), Gaps = 18/371 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +           +   + +         Q D+       E     +  M  
Sbjct: 279 RYIVDK--EVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                +   +   +  +  R    G + +    G     +R+  +   D         +K
Sbjct: 337 PHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIK 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +   +   D  K      +    +      D  K   +     K     ++  +EL
Sbjct: 397 EEF-KRVVNMIQDVYKDFGF-EDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDEL 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +  E           I  ++     L+                           +   G
Sbjct: 455 GLTYE---------EAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIG 505

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +               +        +    +  + +         V I  ++ D      
Sbjct: 506 QDGEQHRPVVIHRGVVSTME---RFVAFLTEETKGAFPTWLAPMQVEIIPVNVD-LHYDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            ++    L++ G+R E+    ++  G +++ A  +  P  I+ G  E     + ++    
Sbjct: 562 ARLLQDELKSQGVRVEID-DRNEKMGYKIREAQMKKIPYQIVVGDKEVENQEVNVRKYGS 620

Query: 453 GKELSREIKNN 463
            K+ S E    
Sbjct: 621 EKQESVEKDEF 631


>gi|224823461|ref|ZP_03696570.1| prolyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603916|gb|EEG10090.1| prolyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 571

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/153 (9%), Positives = 42/153 (27%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        ++   ++   +R      G   +  P+++ +  L +     D   + +   
Sbjct: 38  GIYSWMPMGLKSLRKVEAIVREEMNRAGAIEVIMPIVQPAG-LWQETGRWDTMGEEMLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
           +D   +   ++    ++   L R   +++  +       +                  F 
Sbjct: 97  KDRHERDFVIQPTSEEVVTDLIRGDLKSYRALPKNFYQIQTKFRDERRPRFGVMRGREFT 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D    +A  +   M        + +G
Sbjct: 157 MKDAYSFDRSADAAGVSYDNMYAAYCKIFDRIG 189


>gi|229178727|ref|ZP_04306091.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228604885|gb|EEK62342.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 640

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/228 (11%), Positives = 67/228 (29%), Gaps = 7/228 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++  +         L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHVQYADEVADKLAQAGVRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            +   K  G +++ A  +  P  ++ G  E   G + ++    G+E S
Sbjct: 575 DVRDEK-LGYKIREAQMQKVPYILVIGDKEMENGAVNVR--KYGEEKS 619



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|156740370|ref|YP_001430499.1| threonyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231698|gb|ABU56481.1| threonyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 595

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/360 (10%), Positives = 92/360 (25%), Gaps = 9/360 (2%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA---DTLE 156
                      +   +  E      ++      +       ++   E            +
Sbjct: 218 LFTPKGEMLRHLMESYVREVQTRYGYQHVWTGHIVKETLYKKSGHYEAYRENMFPPMIED 277

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
              + R       ++  +   +          +  E   + R  ++    GL  V+ L  
Sbjct: 278 EEHVYRLKPMNCPSHMTLYKEMGIHSYRDLPLRFAEFATLYRYEERGTLTGLTRVRALTQ 337

Query: 217 EGR--TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
           +            +   L    I  ++        +    L       IA ++ ++    
Sbjct: 338 DDCHIFCRPDQIEEEFGLALRLIREVLETYRFTNYRVRLSLRGEGGKYIADDEAWDLAER 397

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
                    + S + + +             +   +LG        +         G  Y
Sbjct: 398 ALR--TALDHYSVQYEEAPGEAAIYGPKADFLAHDVLGREWQLSTIQVDFIQPRRLGLEY 455

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                + +   V     +    R +  L    +    +       +     D    +   
Sbjct: 456 IAEDGQPRTPVVLHRAVTGTTERFMGVLIEHFAGAFPLWLAPVQAVVIPISDERHGAYAA 515

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + L  AG+R E+ L   +    +++ A  +  P  +I G  E+  G + ++    G+
Sbjct: 516 DVGRQLTAAGLRVEVDLSRER-MQAKIRQAQLQKIPYMLIIGDREQHAGAVAVRC-RSGE 573



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ +   +R +   YG+  + T  +   ++L K     +   + +F  
Sbjct: 215 GLPLFTPKGEMLRHLMESYVREVQTRYGYQHVWTGHI-VKETLYKKSGHYEAYRENMFPP 273

Query: 74  QDDDGQWIS-LRYDLTAP 90
             +D + +  L+      
Sbjct: 274 MIEDEEHVYRLKPMNCPS 291


>gi|145219006|ref|YP_001129715.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Prosthecochloris vibrioformis DSM 265]
 gi|189083618|sp|A4SCK4|SYT_PROVI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145205170|gb|ABP36213.1| Ser-tRNA(Thr) hydrolase [Chlorobium phaeovibrioides DSM 265]
          Length = 666

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    D           +  AGIR E+ +  ++  G +++ A+    P  +
Sbjct: 557 WLAPVQAVVLPIAEDVHDYGSEVRDAMHRAGIRVELDV-RNEKIGRKIREAELAKIPFMV 615

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E+  G + ++    G E +  I+         +A
Sbjct: 616 IVGQKEKEGGSVSLRRHRIGDEGAFSIQEMTEKLLNEIA 654



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 19/54 (35%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           L  E+  G      K   IR  +   ++      G+ P+ TP +   D   +  
Sbjct: 266 LSPEIGSGLPVWLPKGAIIRQELESFLKEEQRRRGYLPVYTPHIGNIDLYKRSG 319


>gi|260494526|ref|ZP_05814656.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197688|gb|EEW95205.1| threonyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 637

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 2/102 (1%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  M  + + +   +     L   GIRAE+    ++  G +++ A+ R   P
Sbjct: 532 PMWLAPVQVKVMTINDECVPYAKEIMAKLDELGIRAELD-DRTETIGYKIREANGRYRIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + +I G  E     + I+      + S+ +    ++     A
Sbjct: 591 MQLIIGKNEVENKEVNIRRFGSKDQFSKSLDEFYNYVVDEAA 632



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + +RN ++D  R  +E  G+  +ETP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMIVRNVLVDLWRKEHEKAGYLQLETPIMLNKE-LWEISGHWFNYRENMYT 317


>gi|108757584|ref|YP_630572.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108461464|gb|ABF86649.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 400

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/260 (11%), Positives = 74/260 (28%), Gaps = 13/260 (5%)

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
            L +   D+   F     +  E +    S           ++     G  A   G +EL 
Sbjct: 138 RLRQFTQDDGHIFCAEPQVVPEVVRFARSLKDFYAGFGFDDVQVAFSGRPASRAGRDELW 197

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG--- 330
             +E           ++       G  Y     +   +    +    +            
Sbjct: 198 DKAESWLLLAAKEAGLQCHMQPGEGAFYGPKLEF---VLKDRLGRAWQCGTIQLDLVLPE 254

Query: 331 --GGRY-DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
                Y D   +R +   +           + V L+    +         V++ ++   +
Sbjct: 255 RFDLHYVDASGARVRPVMLHRALLGSLERFIGVMLEHHGGALPPWLAPQQVVVASVGEGA 314

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
              ++       L+ AG RA +     ++   ++  A     P  ++ G  E + G +++
Sbjct: 315 ADYAERF--AAKLQEAGCRASVD-RRGESLSRKVLDAHAAGVPWLVVAGAREVAAGNVRL 371

Query: 448 KDLAKGKELSREIKNNESWR 467
           +    G +     ++  +  
Sbjct: 372 RQ-RDGAQRDVPWEDAAAEL 390



 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G      + + +   + + +R      G+  + TP L Y+  L +     D   + +F +
Sbjct: 25 GMVFWHPRGLVLYRLLEEHVRQRMRREGYQEVRTPQL-YAQPLWERSGHWDNFRENMFLV 83

Query: 74 QDDDGQWISLRY 85
          +D   + + ++ 
Sbjct: 84 ED-GARHLGVKP 94


>gi|330895889|gb|EGH28174.1| histidyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 55

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLA-KGKELSREIKNNESWREARVAQ 473
            K AD+     A+I G  E +  ++ +K L  +G++ +           + V Q
Sbjct: 1   FKKADKSGALYALILGEEELAAKVIGVKPLRGQGEQQNIAWDALSEHLASCVVQ 54


>gi|317487453|ref|ZP_07946240.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316921312|gb|EFV42611.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 646

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +       +  +   + LR  GIRAE+    ++  G +++ A     P  +
Sbjct: 536 WLAPVQAKILTVTDAQNAFAEEACEALRKQGIRAEVD-TRNEKLGFKVREAQLAKIPYIL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKN 462
           + G  E     + ++ L  G+ L  +  +
Sbjct: 595 VVGDKEVEARSVNVR-LRTGENLGVKSLD 622



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/90 (10%), Positives = 29/90 (32%), Gaps = 2/90 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +R  + D +R  +   G+  ++ P +   + L +         + ++  
Sbjct: 263 GMVFWLPKGMLLRTILEDFLRREHIKRGYQLVQGPQVLRRE-LWEQSGHYANYRENMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIV 103
            + +G    ++             +  +  
Sbjct: 321 TEIEGDMYGIKPMNCVSHMLIYNAHLRSYR 350


>gi|260914628|ref|ZP_05921094.1| proline-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631227|gb|EEX49412.1| proline-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 571

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 47/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R  L  G        +R+ N++ + IR   +  G   ++  + + ++ L +  
Sbjct: 26  MLRAGMIRP-LASGLYTWLPTGLRVLNKVENIIREEMDKSGALEVKMAVTQPAE-LWQES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              +     +   +D   +   +     ++   L R       +    +      +R   
Sbjct: 84  GRWEEYGPELLRFKDRGDRDFVIGPTNEEVITDLIRRECASYKQLPLNLYHIQTKFRDEV 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F               +     M    ++    +G
Sbjct: 144 RPRFGVMRSREFVMKDAYSFHTTHECLQKTYDVMYETYSNIFNRLG 189



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/141 (11%), Positives = 35/141 (24%), Gaps = 3/141 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSK 392
           DG                +  + +                   V I  M+          
Sbjct: 432 DGRPQTMIMGCYGIGVTRVIAAAIEQHHDERGIIWPENIAPFKVAIVPMNMHKSESVQQF 491

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   + L   G+         +  G      +    P  I+ G     +G ++ K+   
Sbjct: 492 AEELYRTLMAQGVEVIFDDRKER-PGVMFADMELIGVPHMIVIGEKNLEKGEIEYKNRRS 550

Query: 453 GKELSREIKNNESWREARVAQ 473
           G++     +      +A+  Q
Sbjct: 551 GEKEMIAKEQLLDVLKAKFNQ 571


>gi|33598297|ref|NP_885940.1| prolyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|81836505|sp|Q7W481|SYP_BORPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33566855|emb|CAE39070.1| prolyl-tRNA synthetase [Bordetella parapertussis]
          Length = 576

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  +I   +R      G   +  P+++ ++   +     ++ 
Sbjct: 31  MIRKLAGGIYTYMPLGLKVIRKIEGIVREEMNAAGAIELLMPVVQPAELWMES-GRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   +   L+    ++   +AR   +++  +      Y I   FR+E+    
Sbjct: 90  GAELLRIKDRHQRDFVLQPTSEEVITDIARNEIQSYRQLP--LNFYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVG 137
              +  +  + +  
Sbjct: 148 GLMRGREFTMKDAY 161



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 10/121 (8%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  +                + LR  G+   +    S+  G  
Sbjct: 464 DARGIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRARGVDVMLDDRDSR-PGVM 522

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    PL +  G    + G++++       +  RE +  +   +  +AQ    +  
Sbjct: 523 FAEWELIGVPLRVTVGERGLNEGVVEL-------QARREAEAAKVPVDQALAQTLAKLDL 575

Query: 481 L 481
           L
Sbjct: 576 L 576


>gi|319400998|gb|EFV89217.1| threonyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 645

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/371 (10%), Positives = 95/371 (25%), Gaps = 18/371 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +           +   + +         Q D+       E     +  M  
Sbjct: 279 RYIVDK--EVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                +   +   +  +  R    G + +    G     +R+  +   D         +K
Sbjct: 337 PHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIK 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +   +   D  K      +    +      D  K   +     K     ++  +EL
Sbjct: 397 EEF-KRVVNMIQDVYKDFGF-EDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDEL 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +  E           I  ++     L+                           +   G
Sbjct: 455 GLTYE---------EAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIG 505

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +               +        +    +  + +         V I  ++ D      
Sbjct: 506 QDGEQHRPVVIHRGVVSTME---RFVAFLTEETKGAFPTWLAPMQVEIIPVNVD-LHYDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            ++    L++ G+R E+    ++  G +++ A  +  P  I+ G  E     + ++    
Sbjct: 562 ARLLQDELKSQGVRVEID-DRNEKMGYKIREAQMKKIPYQIVVGDKEVENQEVNVRKYGS 620

Query: 453 GKELSREIKNN 463
            K+ S E    
Sbjct: 621 EKQESVEKDEF 631


>gi|195443008|ref|XP_002069231.1| GK21088 [Drosophila willistoni]
 gi|194165316|gb|EDW80217.1| GK21088 [Drosophila willistoni]
          Length = 699

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 69/226 (30%), Gaps = 21/226 (9%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           EK   EL   ++  +    + +   I      G   + G   +  +   +    Q   + 
Sbjct: 481 EKYLGELEQWNDAEKALAESLDEFGIPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQ 540

Query: 326 GSVGGGGRYD-GLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                  R++   ++    +  P       +G    ++A+ +   +      + P  +  
Sbjct: 541 LDFQLPIRFNLNYIADDGEKKRPVIIHRAILGSVERMIAILTENYAGKWPFWLSPRQVMV 600

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +          Q   + L  AG  +E    +      +++ A        ++ G  ERS 
Sbjct: 601 VPVGPAYDEYAQSVREQLHAAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSS 660

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
             + ++                           + ++EL+S ++KI
Sbjct: 661 NTVNVR------------------TRDNKVHGEVSVAELISKLQKI 688



 Score = 37.9 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N +++ ++  Y   GF  + +P + Y+  L           + +FS + + 
Sbjct: 323 FQPRGAHIYNTLMNFMKAEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYAENMFSFEVEK 381

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 382 -EKFALKPMNCPG 393


>gi|114769540|ref|ZP_01447166.1| prolyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114550457|gb|EAU53338.1| prolyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 446

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/454 (8%), Positives = 105/454 (23%), Gaps = 67/454 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  ++ + + +     G +P+  P ++ +D L +     D  
Sbjct: 31  MIRQAQSGIYSWLPMGYKVLRKLENIVHDEQIRAGHNPMLMPTIQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            K +  + D  G+ +       +L   + R   +++  +       +             
Sbjct: 90  GKEMLRITDRHGRDMLFGPTNEELITDIFRNSVKSYKDLPMTLYHIQWKF---------- 139

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
                     D V            +M       +  +   +    +    L        
Sbjct: 140 ---------RDEVRPRFGVMRGREFLMKDGYNFDLNKEAAMHSYNRHMVSYLRTY----- 185

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                             +        ++   G    +++ +F   A+    ++    + 
Sbjct: 186 ------------------ERMGMKAIPMRADSGPIGGEDTHEFLVLADTGESEVFFDRNI 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L +            +         ++E   I +        ++         +  +   
Sbjct: 228 LDLS-----------LGDKEIDYNNWDECASIFKEWTTPYARTDETHNPELFAKIPDERQ 276

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
                  +G       +      +         +        +  +     I        
Sbjct: 277 MTSRGIEVGQIFYFGTKYSESMNAKVSTPNDGEIPVHMGSHGIGVSRMVGAIIEASH--D 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKY----QMYTQMLRTAGIRAEMFLGSSKNFGN 419
                         V I  +    D              +L   GI   ++   S+  G 
Sbjct: 335 ENGIIWPEAVSPFGVGIVNLKQGDDQADLACENLYKSASLL---GID-PLYDDRSERAGA 390

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +    D    P  I  G      G++++     G
Sbjct: 391 KFASMDLIGLPWRITVGPRGLKNGVVELTCRRTG 424


>gi|254441019|ref|ZP_05054512.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198251097|gb|EDY75412.1| prolyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 453

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 46/459 (10%), Positives = 124/459 (27%), Gaps = 61/459 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  RI   +    E  G   +  P ++ +D L +     D  
Sbjct: 31  MIKQSSAGIYSWLPLGFKVLKRIEQIVHEEQERAGHIAMLMPTIQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  + D +   +       +L   + R    ++  +      Y I   FR+E+    
Sbjct: 90  GDEMLRITDRNKNDLLYGPTNEELITDIFRSHVSSYKALP--LTLYHIQWKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y   +     +      + 
Sbjct: 148 GVMRGREFYM----------------------------KDGYTFDLTKEDAMHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A+    ++    + 
Sbjct: 180 SYLRTYERMGLQAI------------PMRADSGPIGGDDTHEFLVLADTGESEVFYDAAV 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
             +       +  ++ +     E+   +     E   ++ +++          RG+E   
Sbjct: 228 TDLSFGDRDIDYDDVTQCAEVMEEFTAKYARTDETHDQALFDAIP-ADRQRTARGIEVGQ 286

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +       +    Q P            DG  +     +       +  + +  +  
Sbjct: 287 IFYFGTKYSDAMGATVQGP------------DGKPTPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                         V I  +   D+D+ +  Q     +   G+ A ++    +  G++  
Sbjct: 335 DKGIIWPEGVTPFHVGIVNLKQGDADADAACQSLYAAVAALGLEA-LYDDRDERAGSKFG 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             D    P  I  G      G++++     G+      +
Sbjct: 394 TMDMIGLPWRITVGPRGLKNGVVELTSRKTGESEEMPPE 432


>gi|110667672|ref|YP_657483.1| prolyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121689813|sp|Q18JG3|SYP_HALWD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109625419|emb|CAJ51843.1| proline--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 512

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 61/230 (26%), Gaps = 12/230 (5%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             E           + E ++       +  +   I +        + + G      +   
Sbjct: 164 WQEGHTAHATRADAWAETMLRLNQYESTYEDLLAIPVLQGAKPEHDKFPGADTTTTVEAL 223

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-----PATGFSIGISRLIVAL----KSL 365
           + + K          G    D     +   +        T + +    L   +     + 
Sbjct: 224 MPDGKSVQGATSHYLGTEFADAFDITYTDTDETSRVAHTTSWGLSWRALGALIMTHSDNQ 283

Query: 366 ESSTNNIKEMGPVLITTM---DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       V+I  +   +     L   +     L  AGIR E+     +N G +  
Sbjct: 284 GLVLPPTVAPEQVVIVPIWQTETKERVLEYAEDVANNLDDAGIRVELDDRDDQNPGFKFN 343

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             + +  PL    G  E + G + +     G+ ++ E        + +  
Sbjct: 344 EWELKGVPLRAEIGPDEATEGTVTLIHRPDGESITAERSEIVETVQEQFD 393


>gi|327439263|dbj|BAK15628.1| threonyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 643

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/255 (12%), Positives = 70/255 (27%), Gaps = 20/255 (7%)

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           +++++        K         +     EK F++  +            + +     I 
Sbjct: 405 VELILEVYKDFDLKDFSFRLSY-RDPNNTEKYFDDDQMWETAQAMLKEAMDELGYDYFIA 463

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFS 352
                + G   +  +   +  E+             R+D       GQ         G  
Sbjct: 464 EDEAAFYGPKLDVQVKTAIGKEETLSTAQLDFLLPQRFDLSYIGEDGQPQRPVVIHRGVV 523

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
             + R +  L                       ++      +   + L  AGIR EM   
Sbjct: 524 STMERFVAFLIEEYKGAFPTWLAPVQATIIPVSNAVHYDYAREVQEKLAAAGIRVEMDDR 583

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             K  G +++ A  +  P  ++ G  E +   + I+        +   +           
Sbjct: 584 EEK-LGYKIREAQMQKIPYMLVLGDKEVAENAVNIRRYGSKDSETISFEQF--------- 633

Query: 473 QITIPISELVSTVKK 487
                ++++ + VKK
Sbjct: 634 -----LADITAEVKK 643


>gi|237744663|ref|ZP_04575144.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229431892|gb|EEO42104.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 637

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 2/102 (1%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  M  + + +   +     L   GIRAE+    ++  G +++ A+ R   P
Sbjct: 532 PMWLAPVQVKVMTINDECVPYAKEIMAKLDELGIRAELD-DRTETIGYKIREANGRYRIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + +I G  E     + I+      + S+ +    ++     A
Sbjct: 591 MQLIIGKNEVENKEVNIRRFGSKDQFSKSLDEFYNYVVDEAA 632



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + +RN ++D  R  +E   +  +ETP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMIVRNVLVDLWRKEHEKAEYLQLETPIMLNKE-LWEISGHWFNYRENMYT 317


>gi|57867165|ref|YP_188820.1| threonyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251811076|ref|ZP_04825549.1| threonyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875897|ref|ZP_06284764.1| threonine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|71153576|sp|Q5HNM1|SYT_STAEQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57637823|gb|AAW54611.1| threonyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805411|gb|EES58068.1| threonyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294922|gb|EFA87449.1| threonine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 645

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/371 (10%), Positives = 95/371 (25%), Gaps = 18/371 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +           +   + +         Q D+       E     +  M  
Sbjct: 279 RYIVDK--EVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                +   +   +  +  R    G + +    G     +R+  +   D         +K
Sbjct: 337 PHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIK 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +   +   D  K      +    +      D  K   +     K     ++  +EL
Sbjct: 397 EEF-KRVVNMIQDVYKDFGF-EDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDEL 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +  E           I  ++     L+                           +   G
Sbjct: 455 GLTYE---------EAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIG 505

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +               +        +    +  + +         V I  ++ D      
Sbjct: 506 QDGEQHRPVVIHRGVVSTME---RFVAFLTEETKGAFPTWLAPMQVEIIPVNID-LHYDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            ++    L++ G+R E+    ++  G +++ A  +  P  I+ G  E     + ++    
Sbjct: 562 ARLLQDELKSQGVRVEID-DRNEKMGYKIREAQMKKIPYQIVVGDQEVENQEVNVRKYGS 620

Query: 453 GKELSREIKNN 463
            K+ S E    
Sbjct: 621 EKQESVEKDEF 631


>gi|229161333|ref|ZP_04289318.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228622147|gb|EEK78988.1| Threonyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 639

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/229 (10%), Positives = 62/229 (27%), Gaps = 6/229 (2%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E    +  +S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALANVLHSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  +             L  AGIR E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NVVHEQYANEVVDKLAQAGIRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            +   K  G +++ A  +  P  ++ G  E     + ++     ++   
Sbjct: 575 DMRDEK-LGYKIREAQMQKVPYVLVIGDKEMESKAVNVRK-YSEEQSEV 621



 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   K           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLRGIQKEYNYQEVRTPFMMNQELWEKS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|323475017|gb|ADX85623.1| glycyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323477747|gb|ADX82985.1| glycyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 574

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 68/535 (12%), Positives = 146/535 (27%), Gaps = 84/535 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIY--ENYGFD-PIETPLLEYSDSLGKFLPDEDRPN--- 67
           GF D     ++I+NRI++  R  +  +N  F   IE+P++  +         E   +   
Sbjct: 30  GFYDIGPIGVKIKNRIVELWRKYFVKDNSDFVVEIESPMIGPAKVFEASGHVESFTDPIV 89

Query: 68  -----KGVFS----LQDDDGQWI-SLRYD-LTAPLARYVAENF----------------- 99
                K ++     ++D   + +  L+ + LT    R + EN                  
Sbjct: 90  ECNNCKRIYRADHLIEDVLKRSVEGLKPEELT----RIIRENNIRCQYCGGELGEVRLFN 145

Query: 100 -----DTIVFPCRTYRIGPVFRNEK-----------HGPGRFRQFIQCDVDNVGSSAETA 143
                +   +      I P                              V     S    
Sbjct: 146 LLFTTNIGPYTGNLGYIRPETAQGMFTAFKRVYEATRQRLPIGIAQVGRVGRNEISPRQG 205

Query: 144 DAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL 203
              M       +E      ++    I   +  +  L  +     +K  +           
Sbjct: 206 LIRMREFTIMEVEFFIDPEDNNIENIPLHRFKETKLNILTASEKEKDGKPQEFNLEESVR 265

Query: 204 DKFGLQG------------VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +K  +Q             VK L             + A+ + +  D +     + +E S
Sbjct: 266 EKIIIQPWMAYWMAVASSFVKALGINEFYFEEKLPYERAHYSKQTFDQIAVINGMKVEIS 325

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV----- 306
            H        +   +    +L +  +           + +++T ++  E     +     
Sbjct: 326 GHAYRGDYDLSRHMKYSGQDLTIFRKYKEPKTIKKKNVIVNNTKLKDKELRKKVMELLNG 385

Query: 307 -----YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-SIGISRLIV 360
                 E ++   V  + +    F S+                  P+ G        ++ 
Sbjct: 386 KSAEEIEQMIRNNVTIDGKPLGEFISIVEREEKVHGEHFIPHVVEPSFGVERTLFLTILS 445

Query: 361 ALKSLE----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
           A +  E     S         + +  +    + + K     + L     + E+    S +
Sbjct: 446 AYREKEGRVLLSLPRHLAPYDIAVFPLLEREELIRKSMEIRENLSE---KYEVLYDDSGS 502

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            G +   AD    P AI           + I+D    K++  +I + +   E   
Sbjct: 503 IGRRYARADEIGIPFAITVDPQTLLDNSVTIRDRDSWKQVRVKIDDLKISLEKLF 557


>gi|187477891|ref|YP_785915.1| threonyl-tRNA synthetase [Bordetella avium 197N]
 gi|123738749|sp|Q2L2M5|SYT_BORA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115422477|emb|CAJ49002.1| threonyl-tRNA synthetase [Bordetella avium 197N]
          Length = 650

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/153 (10%), Positives = 41/153 (26%), Gaps = 4/153 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   +  ++   +R +Y + G+  ++ P +   D  L K     D   + +F+
Sbjct: 266 GLIFWHPKGWTLWQQVEQYMRAVYRDNGYQEVKAPQI--LDLSLWKKTGHWDNYRENMFT 323

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + + +   L+        +       +       Y         +             
Sbjct: 324 -TESENRVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRG 382

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                      + ++    AD    +     D+
Sbjct: 383 FTQDDGHIFCTEDQLQDECADFTALLQKVYRDF 415



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 1/87 (1%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +     +      + PV          S       TQ L+  G R +  L   +    ++
Sbjct: 528 MLIENHAGAMPPWLAPVQAVVCCISEPSAEYAAKITQSLKKQGFRVQADL-RGEKITRKI 586

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIK 448
           +    +  P  ++ G  E   G + ++
Sbjct: 587 REHSLQKVPYILVVGDKEAQNGTVAVR 613


>gi|75764566|ref|ZP_00744025.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74487945|gb|EAO51702.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 445

 Score = 57.2 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 70  GMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 127

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 128 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 174



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 66/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 201 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 260

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 261 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRA 320

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 321 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVVPVS-NAVHEQYCSEVAHKLAQAGVRVEQ 379

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S  + 
Sbjct: 380 D-ARDEKLGYKIREAQMQKVPYFLVIGDKEMESGAVNVR--KYGEEKSEVVA 428


>gi|257784431|ref|YP_003179648.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472938|gb|ACV51057.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 588

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 5/144 (3%)

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
              D   ++ +   +   GF      + +  ++ E           V I  +     S S
Sbjct: 447 EYIDSDGTKKQPIMIHRAGFGSFERFIGILTENYEGKFPVWLSPCQVKILPVS--EKSRS 504

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN-CPLAIIQGTGERSRGMLQIKDL 450
                   L  AGIR ++     +  G +++ A   +  P  +I G  E   G + ++D 
Sbjct: 505 YAHEVADKLAAAGIRVKVD-DRDEKIGYKIREARSLDRVPYMLILGEQEVEAGNISVRD- 562

Query: 451 AKGKELSREIKNNESWREARVAQI 474
              +  + E+    +      ++ 
Sbjct: 563 RSNETHAAELDEFIAQVVKENSER 586



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +RN + +    +   +G+  ++TPL+  S SL +     D   + +++ 
Sbjct: 214 GSPFWLPNGMALRNALTEYWHEMQARFGYQEVQTPLI-LSRSLWETSGHWDHYKENMYT- 271

Query: 74  QDDDGQWISLRYDLTAPLA 92
              D +  +++        
Sbjct: 272 TTVDEEDFAIKPMNCPGAC 290


>gi|302545670|ref|ZP_07298012.1| threonine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302463288|gb|EFL26381.1| threonine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 403

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G          +R  + + IR      G+  + +P+L   +   +           +F  
Sbjct: 23 GLPYWLPDGAAVREALEEYIRAEERRAGYRHVYSPVLGKRELY-EVSGHWAHYRDDMFPP 81

Query: 74 QDDDGQWISLRYDLTA 89
           D  G+ + LR  L  
Sbjct: 82 MDVGGEEVVLRPSLCP 97



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%), Gaps = 3/85 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          + + +     G+RA +      + G +++ A     P  +
Sbjct: 300 WLAPVQVVVLPVSEGEAGHAEAFVERCVERGLRARVDGPERGSLGARVRGARL--VPYQV 357

Query: 434 IQGTGERSRGMLQIKDLAKGKELSR 458
           + G  E + G + ++ L  G+++  
Sbjct: 358 VIGAKEAAEGQVALR-LRGGRQVGV 381


>gi|261328034|emb|CBH11011.1| threonyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 799

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 51/480 (10%), Positives = 129/480 (26%), Gaps = 31/480 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +++  R  Y   GF+ + +P + +S  L       D+    +F L + +
Sbjct: 314 WLPHGARIYNTLIEFQRKQYRRRGFEEVVSPNM-FSSRLWMVSGHWDKYADNMF-LINVE 371

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG---------PGRFRQ 127
            +   ++           A    +    P R    G + RNE  G           +   
Sbjct: 372 KEDHGMKPMNCPGHCLMFAMQPHSYRELPIRYADFGVLHRNELSGALTGLTRVRRFQQDD 431

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTL---------EAVGIKRNDYHIGINNRKILDGI 178
                  +       +       + D L              K     +       L   
Sbjct: 432 AHIFCRMDQVKDEIHSALIFLKDVYDVLGFKFFLKHSTRPENKLGSDEMWDEAESYLQAA 491

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL-----T 233
           L       D+  +        +    K  ++ ++ +L +     + + +   ++      
Sbjct: 492 LNSFCGIPDELPDPFNKGSTFVYDGRKESVKKLRAMLKKRGDKKNDENSPADDVWPGPTH 551

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            +  +      +    K    + + ++          +  +      K    SN      
Sbjct: 552 EDAWEENTGDGAFYGPKIDIVVEDALRRRHQCATIQLDFNLPKRFGLKYTLPSNAAGDDG 611

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG----RYDGLVSRFKGQNVPAT 349
              +  E +     E     P    +       S           D  +   + + V   
Sbjct: 612 PAPKATECHKDPNAELKADKPEGKVETAAGAPKSSYEKAAHELNIDQRLDANQARPVMIH 671

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     +A+       +    + P  +  +    ++ +  Q        AG  A++
Sbjct: 672 RAIFGSLERCIAILCEHYGGDWPFWLSPRQVIVVPVSLENAAYAQTVRDTFFAAGFFADV 731

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             G++     +++ A+       ++ G  E+    + ++     +  ++ +     W   
Sbjct: 732 DNGTA-TLEKKIRNAELARYNFILVVGQAEQEGQSVNVRTRDNRRHGTKTLDEALQWLRE 790


>gi|296876104|ref|ZP_06900158.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432815|gb|EFH18608.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 647

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 102/382 (26%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    I    +     P+   E +         + D+       +  +  +  M  
Sbjct: 279 RYIVDK--EIAAGYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIE 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +       D  +  NLT  +    +S+   + +    +  E+ +      K   + 
Sbjct: 397 EEF-KKILQLIIDVYEDFNLTDYRF--RLSYRDPEDKHKYFDNDEMWENAQRMLKAAVD- 452

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +  E     G  +         V+        +    L F +                 
Sbjct: 453 DMGVEYYEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L                +      +   +  
Sbjct: 502 HYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A + +  P  +I G  E     + ++  
Sbjct: 562 AWEVAKQLRDRGVRADVD---ERNEKMQFKIRASQTQKIPYQLIVGDKEMEDKAVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  +          +A
Sbjct: 619 GQKETETMSVDAFVELILTDIA 640



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 65/259 (25%), Gaps = 10/259 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEIAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR             + +       +YR  P+   E     R+ +     
Sbjct: 321 MDMGDGEEFVLRPMNCP-------HHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                    + +     +  + +E    K     I +     L     ++     +  ++
Sbjct: 374 -GLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDFNLTDYRFRLSYRDPEDKHK 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   +   +     V  +  E           G  L  +    +    ++   +  
Sbjct: 433 YFDNDEMWENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLD 492

Query: 253 HELYELVKGTIAGEKGFNE 271
             L E       G  G   
Sbjct: 493 FLLPERFDLHYIGADGEEH 511


>gi|297527300|ref|YP_003669324.1| glycyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297256216|gb|ADI32425.1| glycyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 588

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 28/91 (30%), Gaps = 2/91 (2%)

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
                 +S  +   + L    I A  +     + G +   AD    P AI          
Sbjct: 493 PKHKKMVSIARQIYRALLENNILA--YYDEEGSIGRRYARADEIGIPYAITVDYQTLEDK 550

Query: 444 MLQIKDLAKGKELSREIKNNESWREARVAQI 474
            + ++D    +++   I+       + + + 
Sbjct: 551 TVTLRDRDSREQIRLHIQEIYDKLLSLLGEK 581


>gi|256026433|ref|ZP_05440267.1| threonyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289764445|ref|ZP_06523823.1| threonyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289716000|gb|EFD80012.1| threonyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 637

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 2/102 (1%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCP 430
              + PV +  M  + + +   +     L   GIRAE+    ++  G +++ A+ R   P
Sbjct: 532 PMWLAPVQVKVMTINDECVPYAKEIMAKLDKLGIRAELD-DRTETIGYKIREANGRYRIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + +I G  E     + I+      + S+ +    ++     A
Sbjct: 591 MQLIIGKNEVENKEVNIRRFGSKDQFSKSLDEFYNYVVDEAA 632



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           GF     K + +RN ++D  R  +E  G+  +ETP++   + L +         + +++
Sbjct: 260 GFPFFLPKGMIVRNVLVDLWRKEHEKAGYLQLETPIMLNKE-LWEISGHWFNYRENMYT 317


>gi|302878338|ref|YP_003846902.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302581127|gb|ADL55138.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 637

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 35/113 (30%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R  +  + +  + TP +    +L +     +     +F+ 
Sbjct: 261 GMVFWHPKGWTLWQEIEQYMRAKFREHDYQEVRTPAIMDK-TLWEKSGHWENYRDNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGR 124
             ++ +  +++        +    +        P R    G   RNE  G   
Sbjct: 320 ASEN-RDYAVKPMNCPGHVQIY-NHGLHSYRDLPLRLAEFGSCHRNESSGSLH 370



 Score = 39.8 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 46/395 (11%), Positives = 107/395 (27%), Gaps = 32/395 (8%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   K     +++     +  +  +             +        
Sbjct: 266 HPKGWTLWQEIEQYMRAKFREHDYQEVRTPAI--MDKTLWEKSGHWENYRDNMFTTASEN 323

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDD--KLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
           R+     +N    +      +  + D   +L E     R        GL  V+       
Sbjct: 324 RDYAVKPMNCPGHVQIYNHGLHSYRDLPLRLAEFGSCHRNESSGSLHGLMRVRG----FT 379

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
            D++  F   A + SE  + +V    +  +     +   +        G +E    +E  
Sbjct: 380 QDDAHIFCTEAQVESEVSNFIVMLNEVYRDFGFDNVIVKLSTRPEKRVGSDETWDKAEAG 439

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDG 336
             +    NR+        G  Y     +        M +                   D 
Sbjct: 440 LAAALKQNRLDYEVQPGEGAFYGPKVEFTLKDSLDRMWQCGTIQLDFNLPVRLSAEFVDE 499

Query: 337 LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
             +R     +           + + ++    +         V    M+         +  
Sbjct: 500 DNTRKPPVMLHRAILGSMERFIGILIEHHAGAFPMWLSP--VQTVLMNISQAQEEYAKEI 557

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            Q+L  AGIR ++ L  ++    +++    +  P  +I G  E S  ++ ++    G+  
Sbjct: 558 GQILARAGIRVQLDL-RNEKITYKIREHSLQKLPYQLIVGDKEVSGRLIAVRT-RSGE-- 613

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                         + Q+TI    L+   K  ++ 
Sbjct: 614 -------------DLGQMTI--DALIERFKAEIKS 633


>gi|289580635|ref|YP_003479101.1| threonyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530188|gb|ADD04539.1| threonyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 650

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/344 (11%), Positives = 91/344 (26%), Gaps = 12/344 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           +V  +     +       D +    +  +++ +   N      I +       D      
Sbjct: 306 HVFKTDLWHRSGHYENYQDDMFIFNVGDDEFGLKPMNCPGHAAIFQDQSWSYRDLPIRYA 365

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
              +   K  +  L G+  +      D         +   ++++ ++  +   LE    E
Sbjct: 366 ENGKVYRKEQRGELSGLSRVWAFTIDDGH--LFIRPDQIEQEVEEIMDMIIDVLETFDLE 423

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
               +        G +E+   +E   ++      ++       G  Y     + A     
Sbjct: 424 YEMALATRPEKSVGSDEIWEHAEEQLETVLEKRNLEYDIEEGDGAFYGPKIDF-AFEDAI 482

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTN 370
                   V              V     ++ P       +       ++ ++  E    
Sbjct: 483 GRAWDGPTVQLDFNMPDRFDLSYVGEDNEEHEPVMIHRALYGSYERFFMMLIEHYEGKFP 542

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  V +  +     +L               R E+          +++ A     P
Sbjct: 543 FWLAPEQVRVLPIS--DANLGYAYQVANEFDD--FRVEVD-DRDSTLERKIRAAHDDRVP 597

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             II G  E   G + ++D  + +E   EI++      A   + 
Sbjct: 598 YQIIVGDNEEEDGNISVRDRFEDQEYDVEIEDFHDHLVAERDEQ 641



 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   + D + ++ ++ G+D +ETP +  +D   +     +     +F  
Sbjct: 271 GLPLYHPPGKTVLKELEDFVEDLNKDAGYDYVETPHVFKTDLWHRS-GHYENYQDDMFIF 329

Query: 74  QDDDGQWISLRYDLTAPLA 92
                    L+       A
Sbjct: 330 N-VGDDEFGLKPMNCPGHA 347


>gi|213692035|ref|YP_002322621.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|254783509|sp|B7GR13|SYT_BIFLI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|213523496|gb|ACJ52243.1| threonyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320458147|dbj|BAJ68768.1| threonyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 677

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/370 (10%), Positives = 97/370 (26%), Gaps = 33/370 (8%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPAMHLDEEYDADGNVTKPGFDYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   L+   +++           S  +  + V      E+ 
Sbjct: 417 EQMKDELTSLLTFVL-NLLKDFGLSDFYLEL-----------STKDPDKYVGSDEIWEEA 464

Query: 269 FNELVVISE--LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
              L  ++E   +               I        G  ++        N  ++     
Sbjct: 465 TRTLREVAEASHLDLVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPER----- 519

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                       +  +   +    F        V L+    +      + PV +  +   
Sbjct: 520 --FQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVA 575

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +       + + L    +R E+     + FG +++ A +   P  +I G  + +   + 
Sbjct: 576 DEFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVS 634

Query: 447 IKDLAKGKEL 456
            +    G +L
Sbjct: 635 FR-FRDGSQL 643


>gi|111224550|ref|YP_715344.1| threonyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111152082|emb|CAJ63808.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) [Frankia alni
           ACN14a]
          Length = 692

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 47/153 (30%), Gaps = 20/153 (13%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +        I R +  L    +       + PV    +    + +  
Sbjct: 550 EYQAADGTRQRPFMIHRALFGTIERFLAILLEHYAGALP-PWLAPVQAIGIPITDEHVPY 608

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  L   G+R E+     +    +++ A ++  P  ++ G  + ++G +  +    
Sbjct: 609 LDGVAAKLSAHGVRVEVDSSDDR-MQKKIRTAQKQKVPFMLLAGDEDVAKGAVSFR-FRD 666

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTV 485
           G + +                  +P+ + V+ +
Sbjct: 667 GTQRNG-----------------VPVDDAVAEI 682


>gi|297539468|ref|YP_003675237.1| prolyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258815|gb|ADI30660.1| prolyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 573

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 45/168 (26%), Gaps = 9/168 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++  L  G        +R+  ++   +R+     G   +  P ++  + L    
Sbjct: 26  MVRAGLIK-RLGSGLYSWMPLGLRVLRKVETIVRDEMNKAGALELLMPAVQPRE-LWDET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGP 113
                    +  + D   +             D+     R   +           +R   
Sbjct: 84  GRWAVFGPQMLKITDRHSREFCFGPTHEEVITDIARSEVRSYKQLPLNFYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
             R        F            +S ET  A M    ++    +G+K
Sbjct: 144 RPRFGVMRAREFMMKDAYSFHTDFASLETTYANMYQAYSNVFNRLGLK 191



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V I  + +D      +        L  AGI A +     +  G  
Sbjct: 463 DARGIIFPKSMAPFTVTICPIGYDKSEAVSAAANKIYADLNAAGIEALLD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              AD    P  ++ G    + G ++ K     +     +KN   + +
Sbjct: 522 FAEADLMGIPHRLVIGERGLADGTVEYKGRTDAEAQMVALKNVVEFMQ 569


>gi|224541524|ref|ZP_03682063.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525561|gb|EEF94666.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM
           15897]
          Length = 585

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 63/225 (28%), Gaps = 7/225 (3%)

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
           +   +        EK  NEL  + + +    Y +            ++  +   ++  L 
Sbjct: 367 NNKEKYFGNDELWEKSENELREVLKEMDVEFYEAEGEAAFYGPKLDVQVKSALGHDVTLS 426

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              ++ +  P  F         D +      + +           +   L+  + +    
Sbjct: 427 TIQLDYQ-LPERFELTYVDENGDKVRPVVIHRAI----LGSLDRFIAFLLEETKGNLPLW 481

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                V +  +          +     LR A  R        +  G +++ A  +  P  
Sbjct: 482 LAPTQVQVIPVKL-EYHDEYAKEVVAKLRKAHFRVNND-NRDEKLGYRIREAQLKKIPYQ 539

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           ++ G  ER  G +  +   + K+ +             V   T+ 
Sbjct: 540 LVLGDNERDNGTVTYRKHGEKKQTTVTFDEFVELLNTEVENKTLS 584



 Score = 40.6 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 69/259 (26%), Gaps = 11/259 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIR-NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           +G          +R  + D I     E  G++ + TP L       K           +F
Sbjct: 201 KGLPMWLPNGFTVRRLLSDYIMNKELEL-GYEHVMTPSLGNVKLYKKS-GHWAHYKDDMF 258

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
              + D +   LR             +         +YR  PV   E     RF      
Sbjct: 259 PAMELDDEAYVLRPMNCP-------HHMVMYKSTLHSYRDLPVRIAEIANDFRFEASGAL 311

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                  +    D+ +        +      +   + +           ++ L   +   
Sbjct: 312 TGIERARAFTQNDSHIFCRPDQIAQEFKNVAH-LILDVYKDFGFKDYSFRLSLRDKNNKE 370

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           +        +K +    + +K +  E           G  L  +    +   +++   + 
Sbjct: 371 KYFGNDELWEKSENELREVLKEMDVEFYEAEGEAAFYGPKLDVQVKSALGHDVTLSTIQL 430

Query: 252 MHELYELVKGTIAGEKGFN 270
            ++L E  + T   E G  
Sbjct: 431 DYQLPERFELTYVDENGDK 449


>gi|121997498|ref|YP_001002285.1| prolyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|152112924|sp|A1WUX1|SYP_HALHL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|121588903|gb|ABM61483.1| prolyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 568

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 8/79 (10%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRRLSSGLYTWLPLGLRVLQKVERIVREEMNRAGALEVLMPAVQPAE-LWQESGRWEKY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  ++D   +      
Sbjct: 90  GPELLRIRDRHDREGCFGP 108



 Score = 41.4 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 35/122 (28%), Gaps = 19/122 (15%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      L+     D       +     L  +GI   ++       G +    +  
Sbjct: 465 WPAPIAPFQVALVAIKAEDPAVAEAAEALYADLTASGIDV-LYDDRDARPGVKFADMELI 523

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P  ++        G ++ K    G++ +                  +P +E+V+ +K 
Sbjct: 524 GIPHRVVVSPRAIQEGSVEYK----GRQDADP--------------THVPRAEIVTWLKN 565

Query: 488 IL 489
            L
Sbjct: 566 RL 567


>gi|313890276|ref|ZP_07823910.1| threonine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121381|gb|EFR44486.1| threonine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 648

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/395 (11%), Positives = 105/395 (26%), Gaps = 38/395 (9%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   + +         + D+       +  +  +  M       V 
Sbjct: 284 KELASGYQHVYTPPMASVDFYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIEVY 343

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D         ++       
Sbjct: 344 KHHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHLFVTPDQIQEEFQRAL 403

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                D  K  NLT  +    +S+   + ++   +  E+ +   +  K   +  +  +  
Sbjct: 404 QL-IIDVYKDFNLTDYRF--RLSYRDPNDKEKYFDNDEMWEKAQSMLKAALD-EMGVDYF 459

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F +                 +Y G   
Sbjct: 460 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDL-----------KYIGADG 508

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +   G    + R    L                +      +   +       ++
Sbjct: 509 EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHVDYAWEVAKL 568

Query: 400 LRTAGIRAEMFLGSSKNFGNQLK-YADRRN-CPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           LR  G+R ++     +N   Q K  A +    P  +I G  E     + ++    G +++
Sbjct: 569 LRDKGVRVDVD---DRNEKMQYKIRASQTGKIPYQLIVGDKEMDEKSVNVR--RYGSKVT 623

Query: 458 REIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                            T+ ISE V T+   +   
Sbjct: 624 ----------------QTVAISEFVDTILADISRK 642



 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 48/186 (25%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   D   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPMASVD-FYKTSGHWDHYREDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+   LR             +  +    P R   +G + R EK          R 
Sbjct: 321 MDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +        ++ D  +   +    + +   +    +   +   + 
Sbjct: 381 MTLNDGHLFVTPDQIQEEFQRALQLIIDVYKDFNLTDYRFRLSYRDPNDKEKYFDNDEMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 EKAQSM 446


>gi|228475159|ref|ZP_04059885.1| threonine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270770|gb|EEK12172.1| threonine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 645

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 16/124 (12%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R E+    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVEIIPVNVD-LHYDYARNLQDELKSQGVRVEID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E                     LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETIERDEFIW--------------NLV 636

Query: 483 STVK 486
             ++
Sbjct: 637 DEIR 640


>gi|225868159|ref|YP_002744107.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259516675|sp|C0MCN7|SYT_STRS7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225701435|emb|CAW98547.1| threonyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 648

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               + +++ + +         V +  + +++  +       + LR  GIRA++    ++
Sbjct: 526 RFTAILIETYKGAFPTWLAPRQVTVIPISNEA-HIDYAWEVAKTLRDHGIRADVD-DRNE 583

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +++ +     P  +I G  E     + ++
Sbjct: 584 KMQYKIRASQTSKIPYQLIVGDKEMQDKSVNVR 616



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 80/326 (24%), Gaps = 31/326 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 262 GLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N  H        I   
Sbjct: 321 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVHSYRELPIRIAEL 360

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    +      I    ++ L  I   I ++ D  L +
Sbjct: 361 GMMHRYEKSGALSGLQRVREMTLNDGHLFVMPEQIQEEFQRALQLI---IDVYEDFNLTD 417

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--- 249
               L   D  D          + E              +   + +   +F    L+   
Sbjct: 418 YRFRLSYRDPKDTHKYYDN-DEMWENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDIQV 476

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K+     E +                   +   G     + I   ++  +E +T  + E 
Sbjct: 477 KTALGNEETLSTIQLDFLLPERFN--LSYIGADGEEHRPVMIHRGVISTMERFTAILIET 534

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYD 335
             G        + V    +      D
Sbjct: 535 YKGAFPTWLAPRQVTVIPISNEAHID 560


>gi|40063052|gb|AAR37908.1| prolyl-tRNA synthetase [uncultured marine bacterium 560]
          Length = 567

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L ++L  G        +R+  ++   IR          +  P+ + ++ L +     +  
Sbjct: 31  LVSKLASGLYSYLPIGLRVIQKVEKIIREEMNKSLAQELLMPVAQPAE-LWQESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   L  
Sbjct: 90  GPELLRFKDRHERDFCLGP 108


>gi|306833981|ref|ZP_07467104.1| threonine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423847|gb|EFM26990.1| threonine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 666

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 48/125 (38%), Gaps = 2/125 (1%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               + +++ + +         V +  + +++  +       ++LR  G+R ++    ++
Sbjct: 544 RFTAILIENYKGAFPTWLAPHQVTVIPVSNEA-HVDYAWEVAKVLRDKGVRVDVD-ERNE 601

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               +++ +  +  P  +I G  E +   + ++     +  +  I        A + + +
Sbjct: 602 KMQLKIRQSQTKKIPYQLIVGDKEMADKTVNVRRYGSKQTHTEAIDEFVDNILADINRKS 661

Query: 476 IPISE 480
            P +E
Sbjct: 662 RPDAE 666


>gi|293376470|ref|ZP_06622699.1| threonine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325842051|ref|ZP_08167588.1| threonine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644892|gb|EFF62973.1| threonine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489773|gb|EGC92129.1| threonine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 645

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++R +I   I  + E+YG+  + TP++   D   +         + +F  
Sbjct: 260 GLPIWLPNGMKVRQQIERYITELEEDYGYQHVATPVMGSVDLY-RTSGHWAHYQEDMFVP 318

Query: 74  QDDDGQWISLRY 85
            + D + + LR 
Sbjct: 319 MEMDNEELVLRP 330



 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 52/144 (36%), Gaps = 20/144 (13%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  +   +++ + +         V +  +++    L   +   + LR   +R E+ 
Sbjct: 518 IGTYERFMAYLIETYKGAFPLWLAPTQVTVIPVNNQY-HLEYAKEVAKELRKYRVRLEID 576

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +  G +++ +  +  P++I+ G  E +   +  +    G++ +             
Sbjct: 577 -EREEKMGYKIRESQTKKIPMSIVLGDKEVANNEVTFRRF--GEQKT------------- 620

Query: 471 VAQITIPISELVSTVKKILQENKE 494
               T+P+ E V  + + + E K 
Sbjct: 621 ---QTLPLKEFVHFLVEEIAERKN 641


>gi|194017903|ref|ZP_03056511.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010369|gb|EDW19943.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 642

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 2/109 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +   +  L       Q LR  GIR  +     +  G +++ A  +  P   
Sbjct: 536 WLAPVQVQIIPVTTVHLDHCLEVQQQLRKIGIRVTID-ERDEKLGYKMREAQMQKIPYIA 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           + G  E     L I+   +       I++ +     ++   T+   ELV
Sbjct: 595 VIGDTEMQDKSLNIRQHGEKASKQLFIEDFKHLAVQQIQNRTVAQ-ELV 642



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN ++   R +     ++ + TP +   +   K     D  ++ ++  
Sbjct: 263 GMPFYLPKGQIVRNELMAFSREVRNKAQYEEVSTPFMMNQELWEKS-GHWDHYHENMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +L+             +         +YR  P+   E     R       + 
Sbjct: 321 SEVDHTSFALKPMNCPG-------HMLMFKNNLYSYRDLPIRMAEFGQVHRHEFSGALNG 373

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 374 LFRVRTFCQDDAHIF 388


>gi|163745976|ref|ZP_02153335.1| prolyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380721|gb|EDQ05131.1| prolyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 446

 Score = 57.2 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/465 (9%), Positives = 119/465 (25%), Gaps = 65/465 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  ++ + +    +  G  P+  P L+ +D L K     D  
Sbjct: 31  MIKQSSAGIYSWLPLGYKVLRKVEEIVHQEQQRVGHIPMLMPTLQSAD-LWKESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D   + +       ++   + R    ++  +      Y I   FR+E     
Sbjct: 90  GPEMLRIRDRQDRDMLYGPTNEEMITDIFRSHVGSYKDLP--LTLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFLM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A     ++     F
Sbjct: 180 SYLRTYERMGLQAI------------PMRADSGPIGGDDTHEFLVLAETGESEV-----F 222

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
              ++        E+           +    + +        ++         +  E   
Sbjct: 223 YDSEITDLTFGNREIDPSD------HDACRAVLDEFTSRYARTDETHDPELFAKVPEERQ 276

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
                  +G       +      +   G   DG        +       +  + +  +  
Sbjct: 277 RTARGIEVGQIFYFGTKYSDAMNAKVQGP--DGKQVPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                           I  +   D ++ +  +   + L+  G+     L   +  G  +K
Sbjct: 335 DKGIIWPEGVTPFHAGIVNLKQGDDEADAACEALYKSLKALGLD---PLYDDRKGGAGMK 391

Query: 423 YA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +A  D    P  I  G      G++++     G+      +    
Sbjct: 392 FATMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEELPPEQAVE 436


>gi|314936214|ref|ZP_07843561.1| threonine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654833|gb|EFS18578.1| threonine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 645

 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 16/124 (12%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R E+    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVEIIPVNVD-LHYDYARNLQDELKSQGVRVEID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E                     LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNEVNVRKYGSQDQETIERDEFIW--------------NLV 636

Query: 483 STVK 486
             ++
Sbjct: 637 DEIR 640


>gi|92113922|ref|YP_573850.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
           [Chromohalobacter salexigens DSM 3043]
 gi|123387452|sp|Q1QWK7|SYT_CHRSD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91797012|gb|ABE59151.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
           [Chromohalobacter salexigens DSM 3043]
          Length = 632

 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/205 (10%), Positives = 52/205 (25%), Gaps = 5/205 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +   +   +R +Y++ G+  I  P +       K     D  
Sbjct: 255 MQEEAP-GMVFWHPRGWTLWQTVEQYMRGVYKDSGYQEIRCPQIMDVSLWQKS-GHWDNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F   + + +  +L+        +       +       Y         +       
Sbjct: 313 AENMF-FTESEKREYALKPMNCPGHVQVFNSGLRSYRELPVRYGEFGGCHRNEPSGALHG 371

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                            + ++   +            D+       KI   +  +  L  
Sbjct: 372 IMRVRAFTQDDGHVFCTEEQIEPEVTAFHRQALAVYRDFGFDDIAVKI--ALRPEKRLGS 429

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           DD  +     LR          + +
Sbjct: 430 DDNWDRAEEALRNALSRCDVEWEEL 454



 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++         +  TQ L+ +G+R +  L  ++  G +++    +  P  ++ G  E 
Sbjct: 542 VVLNITDAQREYAESVTQRLQKSGLRVKTDL-RNEKIGFKIREHTLQKIPYLLVVGDKEV 600

Query: 441 SRGMLQIKDLAKGK 454
             G + ++    G+
Sbjct: 601 EAGAVAVRT-RSGE 613


>gi|313681998|ref|YP_004059736.1| prolyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154858|gb|ADR33536.1| prolyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 567

 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                   +      V +   +   +S ++  +     L++ GI   +     + FG ++
Sbjct: 459 DEKGCIWTHATAPYLVNVMVSNIKEESHMAYAEELYASLQSRGIETMLDDRKER-FGFKM 517

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             A+    P  +I G  E   G +QI   A  + ++ +  +  S  E 
Sbjct: 518 SDAELIGFPYTVIVG-KELENGSVQIMVRATREMITVDAADVLSKIEE 564



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 40/130 (30%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              ++  G  +      R+  +I   I           ++   +  ++ L +     ++ 
Sbjct: 31  FVTQVAAGLYNFLPMGKRVLRKIETIINEEMAACDAQEVDLSFVTPAE-LWEESGRIEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            K +   +D       L     ++   + R    ++  +      Y+I   FR+E     
Sbjct: 90  GKELLRFRDRKDNLFVLGPTHEEMMVNIVRNRVTSYKQLP--LNLYQIKTKFRDEARPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GLMRGREFVM 157


>gi|312077291|ref|XP_003141239.1| threonyl-tRNA synthetase [Loa loa]
 gi|307763596|gb|EFO22830.1| threonyl-tRNA synthetase [Loa loa]
          Length = 681

 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/393 (9%), Positives = 99/393 (25%), Gaps = 27/393 (6%)

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            +                +++ +     V S                  +  + + D   
Sbjct: 304 FWYPKGAHIYNSLCNFIRKEYRKRGFTEVISPNMYNSKLWEQSGHWEHYSDNMFKIDIEK 363

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
                K ++     +      + +  L  LR  D       + V+ +    + D++  F 
Sbjct: 364 ETFGLKPMNCPGHCLMYSHMPRTHNELP-LRYADFGVLHRKKTVEEITIIFQQDDAHIFC 422

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
           +   +  E ++ +  FL           ++L   T        ++   +    K     N
Sbjct: 423 RQDQVVEEIMNCI-DFLKYAYNDVFGFTFKLNLSTRPEVGYLGDIETWNSAEDKLKEALN 481

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV-----GGGGRYDGLVSRFK 342
                  +  G   + G   +  +   +    Q   +              +D    R +
Sbjct: 482 ASGHKWELNPGDGAFYGPKIDITIQDALRRLHQCATIQLDFQLPIRFDLSYFDENSERQR 541

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
              +             +  ++               + T+    +   +     + +  
Sbjct: 542 PVMIHRALLGSIERMTAILAENYGGKWPFWLSPRQAKVITVHESQNDYGRVVQ--RKIYE 599

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AG   E    SS     Q++ A        ++ G  E   G + ++              
Sbjct: 600 AGFEVEFDADSSDTLNKQIRNAQLAQFNFILVVGPTEARNGTVNVR-------------- 645

Query: 463 NESWREARVAQITIPISELVSTVKKILQENKEE 495
                     +  I + +L+   K+  +E   +
Sbjct: 646 ----TRDNAVRGEIKLEDLIEKFKRFQEEYVRD 674



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 55/194 (28%), Gaps = 5/194 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   I N + + IR  Y   GF  + +P + Y+  L +     +  +  +F  
Sbjct: 301 GSAFWYPKGAHIYNSLCNFIRKEYRKRGFTEVISPNM-YNSKLWEQSGHWEHYSDNMFK- 358

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D + +   L+             +                  + K          Q D 
Sbjct: 359 IDIEKETFGLKPMNCPGHCLMY-SHMPRTHNELPLRYADFGVLHRKKTVEEITIIFQQDD 417

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI--GLHGDDKLN 191
            ++    +    E+   +     A             + +   G L  I      +DKL 
Sbjct: 418 AHIFCRQDQVVEEIMNCIDFLKYAYNDVFGFTFKLNLSTRPEVGYLGDIETWNSAEDKLK 477

Query: 192 ERLIVLRAIDKLDK 205
           E L       +L+ 
Sbjct: 478 EALNASGHKWELNP 491


>gi|284161335|ref|YP_003399958.1| glycyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011332|gb|ADB57285.1| glycyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 567

 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 40/132 (30%), Gaps = 20/132 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +             PV +  +       SK +   QMLR  G   E     S + G + +
Sbjct: 446 ERRVLRLKRWVAPIPVAVLPLLSREPFTSKAKEIVQMLRENGFYTE--YDDSGSIGRRYR 503

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
             D    P  I           + I+D                       Q+ + ISEL 
Sbjct: 504 RFDEIGTPFCITIDHQTFEDETVTIRDRDT------------------TKQVRVKISELP 545

Query: 483 STVKKILQENKE 494
             + ++L  +K+
Sbjct: 546 KVLNELLTSDKD 557



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
          GF D       +R +I +  R  +        I+TP +   +      
Sbjct: 26 GFVDYGPLGNALRRKIENIWRKHFVVRERAVEIDTPTVCVEEVFVASG 73


>gi|67458992|ref|YP_246616.1| prolyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536572|sp|Q4ULX2|SYP_RICFE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|67004525|gb|AAY61451.1| Prolyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 427

 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 46/162 (28%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I + +R+     G   +  P ++ +    +     D  
Sbjct: 31  MIRQQAAGIYTWLPLGLKVLKNIENIVRSNMNKAGALEVLMPCIQPAHLWMES-GRFDNY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +   QD     +       D+   + R+  +++  +       +         R   
Sbjct: 90  GKEMLKFQDRHDNTLLFGPTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F        D    +A     +M     +T   +G+ 
Sbjct: 150 MRGREFLMKDAYSFDINEENAVKTYNQMYQAYINTFRDLGVF 191


>gi|258543749|ref|ZP_05703983.1| proline--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520985|gb|EEV89844.1| proline--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 567

 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 22/79 (27%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  ++   IR      G   +  P ++  + L +        
Sbjct: 31  MIRQNALGVYSWLPLGLRVLRKVEQIIREEMNRAGSLELLMPGVQPGE-LWQESGRWQDY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GPELLRFLDRHEREYCLGP 108



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 26/92 (28%), Gaps = 3/92 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  ++     + ++  +   Q L  AG+   +     K  G  
Sbjct: 458 DERGIIWPQAIAPFTVAILPLNAAKSPEVMAAAEALYQKLLAAGVDVVLD-DRGKRPGFM 516

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               D    P  ++      + G ++ K+   
Sbjct: 517 FADMDLIGIPARVVISDKTLANGEVEYKERRS 548


>gi|109947952|ref|YP_665180.1| threonyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123362536|sp|Q17VZ5|SYT_HELAH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|109715173|emb|CAK00181.1| thrS [Helicobacter acinonychis str. Sheeba]
          Length = 612

 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFWGNFPFFVAPTQIVLIPINEEHHVFALKLKEELKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/386 (10%), Positives = 95/386 (24%), Gaps = 29/386 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMKAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K      + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHHINYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE------------LVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            L E  K     E    E                  ++ +  + +    ++ T +  +  
Sbjct: 463 NLPERFKLAFTNEHNNAEQPVMIHRAILGSFERFIAILSEHFWGNFPFFVAPTQIVLIPI 522

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                +           K++ +    +      +  V   + Q +P              
Sbjct: 523 NEE--HHVFALKLKEELKKRDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEI 580

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDS 387
           L   +       +M       M    
Sbjct: 581 LSIRDREKQAQYKMPLKEFLNMVESK 606


>gi|88705599|ref|ZP_01103309.1| prolyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700112|gb|EAQ97221.1| prolyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 571

 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/106 (10%), Positives = 37/106 (34%), Gaps = 4/106 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  ++   +R   +  G   +  P+++ ++ L +     ++    
Sbjct: 34  KLSSGLYTWMPMGLRVLRKVERVVREEMDASGALELAMPMVQPAE-LWEESGRWEQYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +  +QD   +   L     ++   + R    ++  +       +  
Sbjct: 93  LLRIQDRHQRDFCLGPTHEEVITDIVRNEISSYKQLPLNLYQIQNK 138


>gi|70952361|ref|XP_745354.1| threonine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56525650|emb|CAH82048.1| threonine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 505

 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 52/483 (10%), Positives = 141/483 (29%), Gaps = 40/483 (8%)

Query: 8   RAELP-RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  LP  GF    T    I N++++ +R  Y    ++ + TP +   D L K        
Sbjct: 60  KETLPGSGF--WFTHGANIYNKLIEFMRKEYRIRKYEEVITPNIFSCD-LWKTSGHYQNY 116

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F    ++ +W  ++             +         +Y+  P+   +     R  
Sbjct: 117 KNCMFIFNIENKEW-GMKPMNCPG-------HCLIFKQLNASYKSLPIRLADFGVLHRNE 168

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                         +  DA +       L+ +  +  +    I     L G   K  L+ 
Sbjct: 169 ITGSLSGLTRVRRFQQDDAHIFCS----LDHIKTEVINVLQFIFYVYNLFGF--KYDLYL 222

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +  + +  +   +  ++   + ++L   + + +       G  +     D +      
Sbjct: 223 STRPPKYIGDINTWNFAEQSLKEALELANVKWKLNEGDGAFYGPKIDIVLRDSLNRTHQC 282

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              +   +L          ++        S LV +S  ++N  K  ST+           
Sbjct: 283 GTVQLDFQLPIRFNLQYKNKEYGVGQETDSNLVNQSNKDANEKKEDSTMGNAGNNDEQNK 342

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            +           +    F                    +           + + ++   
Sbjct: 343 LDGENAGNNQPGGELKKGFDR---------------PIIIHRAILGSVERFVAILVEHTS 387

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQ--MYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                       ++  +    +  +KY   + T  L       ++ +  +     +++ A
Sbjct: 388 GKFPFWLSPRQAIVLPISDKFNEYAKYIHDVLTNNL----FDVDVDISVN-TLNKKIREA 442

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
             +     ++ G  E S   + ++D     +    I+   +  +  +   ++ ++E+   
Sbjct: 443 QLKQYNFILVVGEKELSTNTVTVRDRDNPNDQKYTIQELVNNFKKMLDINSVKLNEIPPF 502

Query: 485 VKK 487
           ++K
Sbjct: 503 IQK 505


>gi|229820470|ref|YP_002881996.1| threonyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566383|gb|ACQ80234.1| threonyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 671

 Score = 56.8 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/383 (10%), Positives = 91/383 (23%), Gaps = 39/383 (10%)

Query: 90  PLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
            + R   E       +           + +       R  ++    +            +
Sbjct: 290 SVIRMEMEDYSRRRHVEAGYDFAYTPHITKAHLFETSRHLEWYADGMYPPMQLDAEHHED 349

Query: 147 MC---MMMADTLEAVGIKRNDYHIGINNRKILDG---ILEKIGLHGDDKLNERLIVLRAI 200
                      L+ +    ++       R   +    + E   ++  +K      + RA 
Sbjct: 350 GTLKREGQDYYLKPMNCPMHNLVFAARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRAR 409

Query: 201 -----DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                D       + ++  L    T    D  +   L    +++        +       
Sbjct: 410 GFTQDDAHIYCTREQMRDELASLLTFVL-DLLRDYGLEEFYLELSTRDPEKSVGDDATWD 468

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC--VYEAILGF 313
                          ELV         G     ++    I R  +  T     +E  L  
Sbjct: 469 EATATLRDVATASGLELVDDPGGAAFYG-PKISVQARDAIGRSWQLSTIQLDFFEPGLFD 527

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                         +     +                    I R    L    +      
Sbjct: 528 LEYTASDGSRQQPVMIHRALF------------------GSIERFFAILLEHYAGAMP-P 568

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +        LR A +RAE+  G  + F  +++ A  +  P  +
Sbjct: 569 WLAPVQVRAVPVAEPFNAYLADVVAQLRAASVRAELDDGDDR-FNKKIRTATTQKIPFVL 627

Query: 434 IQGTGERSRGMLQIKDLAKGKEL 456
           I G  +   G +  +    G + 
Sbjct: 628 IAGGEDAEAGAVSFRY-RDGTQR 649


>gi|293603409|ref|ZP_06685836.1| proline--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292818182|gb|EFF77236.1| proline--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 576

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        ++I  ++   +R      G   +  P+++ ++ L +     ++ 
Sbjct: 31  MIRKLAGGIYTYMPLGLKIIRKVEAIVREEMNASGAIELLMPVVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   L+    ++   +AR    ++  +       +             
Sbjct: 90  GAELLRIKDRHQRDFVLQPTSEEVITDIARNEIHSYRQLPLNFYHIQTKFRDERRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D   + A  +   M          +G
Sbjct: 150 MRGREFTMKDAYSFDRDEAGALKSYDTMYAAYMRIFNRLG 189


>gi|238026159|ref|YP_002910390.1| prolyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237875353|gb|ACR27686.1| Prolyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 578

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 9/109 (8%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   +  G  +     +R   ++   +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRRIAGGIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +   +D       +     ++   +AR   +++  +       +  
Sbjct: 90  GPELLRFKDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138


>gi|320528406|ref|ZP_08029568.1| threonyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131320|gb|EFW23888.1| threonyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 591

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/398 (10%), Positives = 101/398 (25%), Gaps = 35/398 (8%)

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
           LAR   ++  T                              D   +          +   
Sbjct: 227 LARGY-QHVLTPSVASTKLYKISGHLAHYKDDMFPIMSRDDDEFVLRPMNCPEHMIIYKS 285

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
              +   + I+  +  I  + R    G L  I         +    +   ++     ++ 
Sbjct: 286 QLHSYRDLPIRIAE--IANDFRFEASGALTGIERS--RAFTQNDSHIFCTEEQIASEIKA 341

Query: 211 VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA-GEKGF 269
           V  L+ +   D              Q +  +S    +  +      +L + + +   +  
Sbjct: 342 VTELILDVYKD----------FNLNQFEFRLSLRDKENTEKYFGNDDLWERSESELREVL 391

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
            E+ V                            T    +     P   E +     G   
Sbjct: 392 KEMNVPYYEAEGEAAFYGPKIDVQVRSALGHDVTLSTIQLDYQLPERFELEYVANGGEK- 450

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
                       +   +           +   L+  +            ++  +  ++  
Sbjct: 451 -----------KRPVVIHRAILGSIDRFVAFLLEETKGILPLWLAPRQAVVIPVSPEAHG 499

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
               +   + LR  G+R E+    ++  G +++ A     P+ ++ G GE     + ++ 
Sbjct: 500 -EYAKKVVEELRKIGVRTELD-DRNEKLGYRIREAQTNKLPIEVVVGDGEIENNGITLRR 557

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
               +E    ++   +  +     + I    L   V+K
Sbjct: 558 YGSRQETKMSLEEFLAAIK-----VEIDEKRLAPEVQK 590



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 63/233 (27%), Gaps = 9/233 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +R  + D I N     G+  + TP +  +    K           +F +
Sbjct: 203 GLPLWLPNGLTVRRLLSDYIMNKELARGYQHVLTPSVASTKLY-KISGHLAHYKDDMFPI 261

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D     LR            E+         +YR  P+   E     RF        
Sbjct: 262 MSRDDDEFVLRPMNCP-------EHMIIYKSQLHSYRDLPIRIAEIANDFRFEASGALT- 313

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               S A T +        + + +      +  + +     L+    ++ L   +   + 
Sbjct: 314 GIERSRAFTQNDSHIFCTEEQIASEIKAVTELILDVYKDFNLNQFEFRLSLRDKENTEKY 373

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  ++ +    + +K +              G  +  +    +   +++
Sbjct: 374 FGNDDLWERSESELREVLKEMNVPYYEAEGEAAFYGPKIDVQVRSALGHDVTL 426


>gi|255030614|ref|ZP_05302565.1| threonyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 303

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 43/106 (40%), Gaps = 2/106 (1%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             +   ++  + +         + I  ++ D+  L   +     L+ AG+RAE+    ++
Sbjct: 187 RFVAYLIEEYKGAFPTWLAPVQMEIIPVNADA-HLDYAKGVQDKLQRAGLRAEVD-DRNE 244

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             G +++ A  +  P A++ G  E   G + ++        + ++ 
Sbjct: 245 KLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETMDLD 290


>gi|242310251|ref|ZP_04809406.1| ATP phosphoribosyltransferase [Helicobacter pullorum MIT 98-5489]
 gi|239523548|gb|EEQ63414.1| ATP phosphoribosyltransferase [Helicobacter pullorum MIT 98-5489]
          Length = 295

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 6/113 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+P+       K  +I+    + +   +   G++ I TP   Y           D  
Sbjct: 15  LSHEIPQDSKLYFGKSAKIKRDFENLVSKTFYENGYEEILTPSFTYLQ------HQRDTQ 68

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           ++    + +     I+LR D T    R +A +        + + I P+F    
Sbjct: 69  SREFVRISNPSNHQIALRNDSTIDAIRLLAPHLKENAIKKKWFYIQPIFVYPT 121


>gi|312868227|ref|ZP_07728427.1| threonine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311095972|gb|EFQ54216.1| threonine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 647

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 103/382 (26%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         + D+       +  +  +  M  
Sbjct: 279 RYIVDK--EVAAGYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIE 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +       D  +  NLT  +    +S+   + +    +  E+ +      K   + 
Sbjct: 397 EEF-KKILQLIIDVYEDFNLTDYRF--RLSYRDPEDKHKYFDNDEMWENAQRMLKAAVD- 452

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +  E     G  +         V+        +    L F +                 
Sbjct: 453 DMGVEYYEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L                +      +   +  
Sbjct: 502 HYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A + +  P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTQKIPYQLIVGDKEMEDKAVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  +        A +A
Sbjct: 619 GQKETETMSVDAFVELILADIA 640



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 65/259 (25%), Gaps = 10/259 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR             + +       +YR  P+   E     R+ +     
Sbjct: 321 MDMGDGEEFVLRPMNCP-------HHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                    + +     +  + +E    K     I +     L     ++     +  ++
Sbjct: 374 -GLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDFNLTDYRFRLSYRDPEDKHK 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   +   +     V  +  E           G  L  +    +    ++   +  
Sbjct: 433 YFDNDEMWENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLD 492

Query: 253 HELYELVKGTIAGEKGFNE 271
             L E       G  G   
Sbjct: 493 FLLPERFDLHYIGADGEEH 511


>gi|290559258|gb|EFD92597.1| Anticodon-binding domain protein [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 329

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 45/137 (32%), Gaps = 3/137 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
                   +  +        + + L++ +           V + T+     +    +   
Sbjct: 190 NKEHFPIVIHRSIMGSIGRFMGIILENSKGDLPFWISPVQVRVLTI--TEKNAKYAENVI 247

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L+  GIR +  L S      +++       P  II G+ E  +  + +++     + +
Sbjct: 248 KKLKENGIRVDSELDSG-TLEYKIRKGQLEKIPYIIIIGSKEEEKNTISVRNRKGKTDYN 306

Query: 458 REIKNNESWREARVAQI 474
            ++    S R   + Q 
Sbjct: 307 IDLDEFISERLEDIKQR 323


>gi|260773310|ref|ZP_05882226.1| prolyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612449|gb|EEX37652.1| prolyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 548

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/169 (10%), Positives = 48/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 6   MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 64

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 65  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D +        +     K  D        
Sbjct: 121 RFGVMRAREFSMMDAYSFDIDKDGLEKSYQAMHDAYCKAFDRMGLDYRP 169



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 456 MNMHKSERVQQAAETLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGIPHTIIIGDRSM 514

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G  + K    G++ +  + N  S+   +
Sbjct: 515 DEGNFEYKHRRSGEKSAVPMANMVSFIHEQ 544


>gi|126138470|ref|XP_001385758.1| mitochondrial threonyl tRNA synthetase [Scheffersomyces stipitis
           CBS 6054]
 gi|126093036|gb|ABN67729.1| mitochondrial threonyl tRNA synthetase [Scheffersomyces stipitis
           CBS 6054]
          Length = 449

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 49/461 (10%), Positives = 126/461 (27%), Gaps = 73/461 (15%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++  ++N    YGF  + TPL+ Y   L +           +F +    
Sbjct: 39  FLPHGTRIFNKLVQFMKNQQTKYGFQEVITPLI-YKSKLWETSGHWQNYKDDMFKVV--- 94

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G  +S                                  NE++   +     +  +  + 
Sbjct: 95  GNDVS----------------------------KEHDIHNEQYSHDKSEGLHEYGLKPMN 126

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                          + L       +  H    +   L G+      H DD      +  
Sbjct: 127 CPGHCLIFSKFDRSYNELPIRLSDFSSLHRNEAS-GALSGLTRVRRFHQDDGHIFCEMG- 184

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
               ++++     + L+ G  +    G+      L++   +  +  +     ++ +   E
Sbjct: 185 ----QINQEIHNTINLIKGTYKVFGIGEKDIEYFLSTRPEEKFMGDI-----ETWNMAEE 235

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            +K  +    G     +        G   + +   +   +         ++    F +  
Sbjct: 236 QLKNVLDTAAGQGNWQINEGGGAFYGPKIDVLLTDAFNKKHQVGTIQLDFQLPARFDLKY 295

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
             +                     +   V    F        + L   +           
Sbjct: 296 VAE---------------DGTRDNQPIMVHRAVFGSLERFFAILLDHYQGKWPFWINPRQ 340

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRA--EMFLGSSKNF-----------GNQLKYA 424
            +I  ++  +  +   +   +ML    I +  ++   +  NF           G+++K A
Sbjct: 341 AVIVPVN--ASHVEAAEKLHKMLSGDIINSVNDISPITGYNFYVDVDRRAETVGSRIKDA 398

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            ++     I+ G  +   G + I+     + ++ + +    
Sbjct: 399 VQKGYSYIIMIGDKDIKNGTVAIRTRDSRQIVNLKPEEIYE 439


>gi|121609349|ref|YP_997156.1| prolyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|152112961|sp|A1WKI1|SYP_VEREI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|121553989|gb|ABM58138.1| prolyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 581

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 7   LRAELPR----GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           +RA L +    G        +R+  +I   +R      G   +  P+++ ++ L +    
Sbjct: 27  MRAGLIKKLGAGIYSYMPMGLRVLRKIEAIVREEMNRAGAVELTMPVVQPAE-LWQETGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            D+    +  +QD  G+   ++    ++   +AR    ++  +       +  
Sbjct: 86  FDKMGPELLRIQDRHGRDFVVQPTSEEVITDIARQELRSYKQLPKNFYQIQTK 138


>gi|332184487|gb|AEE26741.1| Prolyl-tRNA synthetase Bacterial type [Francisella cf. novicida
           3523]
          Length = 565

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 53/542 (9%), Positives = 138/542 (25%), Gaps = 76/542 (14%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK-- 58
           M K   ++ +L  G        +++  +I D +R+     G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPLGLKVLQKIQDIVRDEMNKAGASELLLPSILPSELLQETH 84

Query: 59  ---------------------FLPDEDRPNKGVFSLQDDDGQWISL---------RYDLT 88
                                + P  + P   +        + + L         R ++ 
Sbjct: 85  RWDKFGPELLKLRDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEIR 144

Query: 89  A--PLARY----------VAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
               + R             EN   +               +K G               
Sbjct: 145 PRFGVMRAREFIMKDAYSFHENSQCLRNTYNIMYTTYCNILDKIGLAYRPVKADTGAIGG 204

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
            +S E                      +  +    +  L   +    L           +
Sbjct: 205 DNSHEFQVLANAGEDIICYSNGSDYAANIELATYAKPDLSKRVVSQNLITKIHTPNIKTI 264

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK--GANLTSEQIDIMVSFLSIDLEKSMHE 254
            +  ++++    Q +K ++ +   +N           L   +I+ +   ++     +  E
Sbjct: 265 DKLCNQMNFDIKQTIKTMIIKDAKNNFFALVIRGDHELNETKINKLEQIVAPYTLATKEE 324

Query: 255 LYELVKGTIAGEKGF--------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           ++ L          +        +   V    +       +    +    R +  Y    
Sbjct: 325 IFSLFNANPGSLGIYNCPISIIADYSAVAITDLVCGANQDDYHFTNVNWDRDVTNYQVAD 384

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGR-------YDGLVSRFKGQ------NVPATGFSI 353
              ++   +  + +  +   +    G        Y   ++            +    +  
Sbjct: 385 IRNVVTGDISPDGKGTLELTNGIEVGHIFELEDVYSKPMNANIIDQDGKSKPMLMGCYGF 444

Query: 354 GISRLIVALKSL-----ESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIR 406
           G+SR++ A                     V I  ++++             Q L T GI 
Sbjct: 445 GVSRVMAAAIEQSHDQNGIIWPEAIAPYQVAILPINYNKSDKVKEVADKLYQDLLTNGID 504

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +    ++  G     AD       ++ G     +G+++ K+    ++    +      
Sbjct: 505 VLLDDRGAR-PGVMFADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITVTELIEI 563

Query: 467 RE 468
            +
Sbjct: 564 LK 565


>gi|296502926|ref|YP_003664626.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296323978|gb|ADH06906.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 640

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 71/247 (28%), Gaps = 8/247 (3%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     + +E I  +++ +    +    E    +        G ++L   +E
Sbjct: 382 FCQDDAHLFVTPKQIENE-IKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAE 440

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRY 334
              ++   S   K       G  Y     +         ++                   
Sbjct: 441 AALENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYI 500

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D    + +   +           L + ++    +         V +  +  ++       
Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYAN 559

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                L  AG+R E      +  G +++ A  +  P  ++ G  E   G + ++    G+
Sbjct: 560 EIALKLAQAGVRVEQD-ARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGE 616

Query: 455 ELSREIK 461
           E S  I 
Sbjct: 617 EKSEVIA 623



 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|45656749|ref|YP_000835.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|81830828|sp|Q72U06|SYP_LEPIC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|45599985|gb|AAS69472.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 576

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++  +I   +R    + G    + P+L  SD   +         K +F +
Sbjct: 38  GLYFYLPLGLKVLKKIEQIVREEMNSTGALEFDLPILTPSD-FWEQSGRWSAMGKEMFRI 96

Query: 74  QDDDGQWISLRY 85
           QD      +L  
Sbjct: 97  QDRHDLSYALGP 108



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 7/125 (5%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQL 421
                          V + ++    D  SK + +  +L   GI            F   L
Sbjct: 458 DEKGIFWPISIAPFEVSLVSIVKGEDQYSKIEEFYNVLINEGIEVFWDDRDLGPGFK--L 515

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K ++    P+ I  G      G + I +  K +E S       S  +  VA++     EL
Sbjct: 516 KDSELIGFPIRITIGKKFFESGEISIYNRKKDQEDSF----VFSGFDDLVARVESMRQEL 571

Query: 482 VSTVK 486
            + ++
Sbjct: 572 FTELR 576


>gi|318057114|ref|ZP_07975837.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318075787|ref|ZP_07983119.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 658

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/416 (10%), Positives = 99/416 (23%), Gaps = 63/416 (15%)

Query: 90  PLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
            + R   E                     +           +    +       E  D  
Sbjct: 288 GIIRRAMEDYSRRRHEEEGYEFVYSPHTTKGALFQKSGHLDWYADGMYPPMQLDEGVDYY 347

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  M       +   R   +  +  R    G + +    G      R       D     
Sbjct: 348 LKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYC 407

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
             + +   L +  T    +  +   L    +++           S  +  + V      E
Sbjct: 408 TKEQMAEELDKTLTFVL-NLLRDYGLDDFYLEL-----------STKDEKKFVGSDEVWE 455

Query: 267 KGFNELVVISELV----------RKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPV 315
           +    L  ++E                     ++    I R  +  T    +     F +
Sbjct: 456 EATATLRQVAEKQGLPLVPDPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFDL 515

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
                       V                 +    F        V L+    +      +
Sbjct: 516 SYTAADGSRQRPVM----------------IHRALFGSIERFFAVLLEHYAGAMPPW--L 557

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
            PV    +      +   + +    R  G+R ++   S +    +++   ++  P  +I 
Sbjct: 558 APVQAVGIPVGDAHVPYLKEFAAEARRKGLRVDVDASSDR-MQKKIRNHQKQKTPFMVIV 616

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           G  + + G +  +    G + +                  IP  E ++ +  I++ 
Sbjct: 617 GDDDMNAGTVSFRH-RDGSQENG-----------------IPKDEAIAKLLDIVER 654


>gi|291516871|emb|CBK70487.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Bifidobacterium
           longum subsp. longum F8]
          Length = 677

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/408 (11%), Positives = 108/408 (26%), Gaps = 44/408 (10%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 297 MHCKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEKDADGNITKPGADYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   LT   +++     +  +                 ++ 
Sbjct: 417 EQMKDELTSLLTFVL-NLLKDFGLTDFYLELSTKDPNKYVGSDEIWEEATNTLAEVAKES 475

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGS 327
             ELV               ++    I R  +  T    +     F +    +       
Sbjct: 476 NLELVDDP-CGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRP 534

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
           V                 +    F        V L+    +      + PV +  +    
Sbjct: 535 VM----------------IHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVAD 576

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +       + + L    +R E+     + FG +++ A +   P  +I G  + +   +  
Sbjct: 577 EFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVSF 635

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           +    G +L+    +                 ++++ +KK +Q N  +
Sbjct: 636 R-FRDGSQLNGVPVDTA-------------REQILTVIKKRVQVNSAD 669


>gi|257068556|ref|YP_003154811.1| threonyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559374|gb|ACU85221.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Brachybacterium
           faecium DSM 4810]
          Length = 666

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +   ++ +   +     LR  G+R E+     +    +++   +   P  +
Sbjct: 564 WLAPVQVVGVPVAAEYVPYLEEVAAKLRAHGVRVEVDSSDDR-MQKKIRTHTKEKVPYLL 622

Query: 434 IQGTGERSRGMLQIKDLAKGKE 455
           I G  +++ G +  + +  G +
Sbjct: 623 IAGGEDQAHGAVSFR-MRDGSQ 643


>gi|229044114|ref|ZP_04191800.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229109806|ref|ZP_04239391.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228673651|gb|EEL28910.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228725227|gb|EEL76498.1| Threonyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 640

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 71/247 (28%), Gaps = 8/247 (3%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     + +E I  +++ +    +    E    +        G ++L   +E
Sbjct: 382 FCQDDAHLFVTPKQIENE-IKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAE 440

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRY 334
              ++   S   K       G  Y     +         ++                   
Sbjct: 441 AALENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYI 500

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D    + +   +           L + ++    +         V +  +  ++       
Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYAN 559

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                L  AG+R E      +  G +++ A  +  P  ++ G  E   G + ++    G+
Sbjct: 560 EIALKLAQAGVRVEQD-ARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGE 616

Query: 455 ELSREIK 461
           E S  I 
Sbjct: 617 EKSEVIA 623



 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|217031884|ref|ZP_03437386.1| hypothetical protein HPB128_3g3 [Helicobacter pylori B128]
 gi|298736935|ref|YP_003729465.1| threonyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946353|gb|EEC24958.1| hypothetical protein HPB128_3g3 [Helicobacter pylori B128]
 gi|298356129|emb|CBI67001.1| threonyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 612

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 83/263 (31%), Gaps = 9/263 (3%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F     + SE +  ++ F    ++         +        G +E+   +
Sbjct: 354 EFTQDDAHIFCSFEQIQSE-VSAILDFTHKIMKAFNFSYEMELSTRPTKSIGDDEVWEKA 412

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG--GGRY 334
               K     +RI        G  Y      +       +  K +               
Sbjct: 413 TSALKEALKEHRIDYKIDEGGGAFYGPKIDIKIT---DALRRKWQCGTIQVDMNLPERFK 469

Query: 335 DGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
               +       P       +G     +A+ S     N    + P  I  +  + +    
Sbjct: 470 LAFTNEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVF 529

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + L+   I  E+   +  +   +++ A+++  P+ ++ G  E    +L I+D  K
Sbjct: 530 ALKLKEELKKRDIFVEVLDKND-SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588

Query: 453 GKELSREIKNNESWREARVAQIT 475
             +    +K   +  E+++ +++
Sbjct: 589 QDQYKMPLKEFLNMVESKMQEVS 611



 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 68/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSQALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMKAFNFSYEMELSTRPTKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDEVWEKATSALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEHNHAE 480


>gi|312137209|ref|YP_004004546.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Methanothermus
           fervidus DSM 2088]
 gi|311224928|gb|ADP77784.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Methanothermus
           fervidus DSM 2088]
          Length = 608

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 63/232 (27%), Gaps = 26/232 (11%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK-QKPVV 324
           +  + E     + + +       I++                   LG P+ N   Q  V 
Sbjct: 376 KDFYEENKEWIKSLSRKINEPILIELLPKRKHYWVAKIDFAAVDSLGRPIENSTVQIDVE 435

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL------ESSTNNIKEMGPV 378
            G        D          +  +        +   L+                 + P+
Sbjct: 436 SGKRFNISYLDEDGKNKFPVILHCSPTGSIERVICSLLEENAKKINNNKLPMLPVWLSPI 495

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +      +       + + + GIRA++   +++    +++ A +   P   + G  
Sbjct: 496 HVRVIPVSEKHVDYAIDIVKKINSYGIRADID-DTNETVSKKVRNAGKEWIPYVAVIGDK 554

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           E S   L +                         +  + + EL+  VK  L+
Sbjct: 555 EISEDELTV------------------TIRENDEKRELKLEELIEIVKNKLK 588


>gi|225870895|ref|YP_002746842.1| threonyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700299|emb|CAW94574.1| threonyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 655

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               + +++ + +         V +  + +++  +       ++LR  GIRA++    ++
Sbjct: 533 RFTAILIETYKGAFPTWLAPRQVTVIPISNEA-HIDYAWEVAKILRDHGIRADVD-DRNE 590

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +++ +     P  +I G  E     + ++
Sbjct: 591 KMQYKIRASQTSKIPYQLIVGDKEMQDKSVNVR 623



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 79/326 (24%), Gaps = 31/326 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     +   + +F  
Sbjct: 269 GLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWEHYQEDMFPT 327

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR                             V++N  H        I   
Sbjct: 328 MDMGDGEEFVLRPMNCP--------------------HHIQVYKNHVHSYRELPIRIAEL 367

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     A + +  +   TL    +      I    ++ L  I   I ++ D  L +
Sbjct: 368 GMMHRYEKSGALSGLQRVREMTLNDGHLFVTPEQIQEEFQRALQLI---IDVYEDFNLTD 424

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE--- 249
               L   D  D          + E                  + +   +F    L+   
Sbjct: 425 YRFRLSYRDPKDTHKYYDN-DEMWENAQSMLKAALDEMGADYFEAEGEAAFYGPKLDIQV 483

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K+     E +                   +   G     + I   ++  +E +T  + E 
Sbjct: 484 KTALGNEETLSTIQLDFLLPERFN--LSYIGADGEEHRPVMIHRGVISTMERFTAILIET 541

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYD 335
             G        + V    +      D
Sbjct: 542 YKGAFPTWLAPRQVTVIPISNEAHID 567


>gi|261821451|ref|YP_003259557.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605464|gb|ACX87950.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 642

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 96/349 (27%), Gaps = 10/349 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVMWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N I+ +     G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAAALTENNIEFAYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQADYVNELTQKLQEAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQITI 476
           ++ G  E   G + +     KDL          K  +  R   + Q+ +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVISKLLQEIRSRSLHQLEV 642



 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/205 (6%), Positives = 52/205 (25%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   ++Y +  ++ P       + +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGP-FMMDRVMWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 425 EKRIGSDEMWDRAEADLAAALTENN 449


>gi|228958638|ref|ZP_04120356.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228801059|gb|EEM47958.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 640

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369



 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/228 (11%), Positives = 65/228 (28%), Gaps = 7/228 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYANEIALKLAQAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKS 619


>gi|296139421|ref|YP_003646664.1| prolyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027555|gb|ADG78325.1| prolyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 585

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 2/98 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +   + D  + +  +     L  AG++  +      + G + K
Sbjct: 478 DDKGLRWPKGVAPFDVHVVIANKDEGAWTGAESLAAELDAAGLQVLLD-DRKASPGIKFK 536

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
            ++    P  ++ G    + G+++++D   G+     +
Sbjct: 537 DSELLGVPTVVVVG-RGWADGVVELRDRLTGESREIPV 573



 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 7/79 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRP 66
            +  G        +R+   +   +R      G   I  P L   E  ++  ++    D  
Sbjct: 36  RIAPGVYSWLPLGLRVLRNVEHVVREEMNAIGGQEILLPALLPREPYETTNRWTEYGD-- 93

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F LQD  G  + L  
Sbjct: 94  --SLFRLQDRKGADMMLGP 110


>gi|229144961|ref|ZP_04273357.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228638483|gb|EEK94917.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
          Length = 640

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 71/247 (28%), Gaps = 8/247 (3%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     + +E I  +++ +    +    E    +        G ++L   +E
Sbjct: 382 FCQDDAHLFVTPKQIENE-IKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAE 440

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRY 334
              ++   S   K       G  Y     +         ++                   
Sbjct: 441 AALENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYI 500

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D    + +   +           L + ++    +         V +  +  ++       
Sbjct: 501 DENNEKKRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYAN 559

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                L  AG+R E      +  G +++ A  +  P  ++ G  E   G + ++    G+
Sbjct: 560 EIALKLAQAGVRVEQD-ARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGE 616

Query: 455 ELSREIK 461
           E S  I 
Sbjct: 617 EKSEVIA 623



 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|195578689|ref|XP_002079196.1| GD23818 [Drosophila simulans]
 gi|194191205|gb|EDX04781.1| GD23818 [Drosophila simulans]
          Length = 747

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 64/221 (28%), Gaps = 21/221 (9%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL   ++  +    + N   +      G   + G   +  +   +    Q   +      
Sbjct: 534 ELEQWNDAEKALAESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQLDFQL 593

Query: 331 GGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
             R++       G+           +G    ++A+ +   +      + P  +  +    
Sbjct: 594 PIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQVMVVPVGP 653

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                 Q     L  AG  +E    +      +++ A        ++ G  ERS   + +
Sbjct: 654 AYDQYAQAVRDQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNV 713

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           +                           + ++EL++ ++KI
Sbjct: 714 R------------------TRDNKVHGEVSVAELITKLQKI 736



 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++  I+  Y   GF  + +P + Y+  L       +   + +FS + + 
Sbjct: 371 FQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI-YNAKLWMTSGHWEHYAENMFSFEAEK 429

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 430 -EKFALKPMNCPG 441


>gi|195351005|ref|XP_002042027.1| GM26732 [Drosophila sechellia]
 gi|194123851|gb|EDW45894.1| GM26732 [Drosophila sechellia]
          Length = 747

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 64/221 (28%), Gaps = 21/221 (9%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL   ++  +    + N   +      G   + G   +  +   +    Q   +      
Sbjct: 534 ELEQWNDAEKALAESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQLDFQL 593

Query: 331 GGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
             R++       G+           +G    ++A+ +   +      + P  +  +    
Sbjct: 594 PIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQVMVVPVGP 653

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                 Q     L  AG  +E    +      +++ A        ++ G  ERS   + +
Sbjct: 654 AYDQYAQAVRDQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNV 713

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           +                           + ++EL++ ++KI
Sbjct: 714 R------------------TRDNKVHGEVSVAELITKLQKI 736



 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++  I+  Y   GF  + +P + Y+  L       +   + +FS + + 
Sbjct: 371 FQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI-YNAKLWMTSGHWEHYAENMFSFEAEK 429

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 430 -EKFALKPMNCPG 441


>gi|71893938|ref|YP_279384.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|71852065|gb|AAZ44673.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 579

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/250 (10%), Positives = 73/250 (29%), Gaps = 10/250 (4%)

Query: 225 DFTKGANLTSEQID--IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           + +    + SE +D   +  F     ++      +  +     E+   +L    +  + +
Sbjct: 336 EISHLFQMISEVLDFFKVQIFYISFSKRDPKNKDKFFQDDQMWEQAEADLKQFLDQNKIN 395

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
                +I  ++     +++         L    +           +     Y+   +   
Sbjct: 396 --YIEKIGEAAFYGPKIDFQVKTALNKELTISTLQLDFLLPEKFKISFINEYNKKETPIL 453

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
                     IG     +AL   +S  N    + P  I  +          Q   ++L  
Sbjct: 454 IH-----RGLIGTYERFIALLLEQSKGNLPFWISPKQIIVIPVAEKHNDFAQKIHKILFD 508

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            G  +E+ L S +    +++ A+       +I G  E ++  +  +     +     + +
Sbjct: 509 LGFNSEIDLRSER-ISRKIREANLEKINFQVIIGDEEITKNEITYRKFGSPELFRISLVD 567

Query: 463 NESWREARVA 472
                +    
Sbjct: 568 FVDLLKNSEK 577


>gi|301167107|emb|CBW26686.1| threonyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 584

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 70/256 (27%), Gaps = 14/256 (5%)

Query: 16  ADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQD 75
                K   + NR+++ +R IY  Y +  + TP +  SD L       +   + ++    
Sbjct: 204 PFFMPKGAFVYNRLIEFMREIYRKYDYQEVITPQILDSD-LWHTSGHYEHYKENMY-FSR 261

Query: 76  DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
            D +  +++                 +    +        R    G     +        
Sbjct: 262 IDEREYAVKPMNCP--------CHMLMFKHYKYSYRDLPMRYADFGRLHRYEKAGAVTGL 313

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
                   D     +  D ++    K  +            GI   +    + K  +   
Sbjct: 314 TRVRTFCQDDAHIFIDMDGIQDEITKLMEMFFICYEHFGFTGIKVNLSTRPEKKSGDDAT 373

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                DK +    + +K    E           G  +  E  D +  +  +   +   +L
Sbjct: 374 ----WDKAENALEEALKKSGHEYFIKEGDGAFYGPKIDVEIADALGRYYQLGTIQLDFQL 429

Query: 256 YELVKGTIAGEKGFNE 271
            E    +    +G +E
Sbjct: 430 PERFGLSYTNAQGNDE 445



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +    ++   L         L   G+R ++    +++ G + +   +   P  I+ G  E
Sbjct: 483 VIVPVNNEFHLDFANKLQSELFAMGLRVKVD-DRNESMGYKTRQIQKSKAPFMIVIGDRE 541

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                + ++   + K  S  I+  +       A+ 
Sbjct: 542 MENNSVSLRKHGEKKTESLTIEELKKLFSELDAEF 576


>gi|312218414|emb|CBX98360.1| similar to threonyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 784

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 55/476 (11%), Positives = 127/476 (26%), Gaps = 46/476 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N +   +R  Y N G+  + +P + Y+ +L K           +F+  D +
Sbjct: 350 FLPHGQIIYNTLQAFLREEYWNRGYQEVGSPNM-YNSALWKISGHWQHYADDMFTF-DVE 407

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+             +        R+YR  P+   +     R             
Sbjct: 408 KEKWALKPMNCPG-------HCLIFKHRERSYRELPIRMADFGILHRNEASGALTGLTRV 460

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
              +  D  +        E +          +     L  +  K G     KL+ R    
Sbjct: 461 RRFQQDDTHVFCTQDQINEEI----------LALFDFLKAVYGKFGFTFKLKLSTRPEGF 510

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
                        +   L E      G +       +     +   +S  L++       
Sbjct: 511 LGDIDTWNQAEAKLTQALDEFTAGGGGAWELNPGDGAFYGPKIDITISDALKREFQCATI 570

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            +   +  +    EL  ++     +     ++K     V                  +  
Sbjct: 571 QLDFQLPNQ---FELEYMTSEGAATKPKEEKVKAEQQKVEKKAEQPK------EKDHIDQ 621

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           +K       ++    R              A   S      I+           +     
Sbjct: 622 KKDNLGGQVAIPKEIRPPQPGYARPVMIHRAIYGSFERFIAILTEHFAGRWPFWLSPRQV 681

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           ++I  M   +D + + Q     LR   + A++ +  +     +++ A        ++ G 
Sbjct: 682 MVIPVMPSANDYVKEVQA---ELRKHHLHADIDISGN-TMQKKIRTAQLSLYNFIMVVGA 737

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            E+    +  ++                 +E +     +P+ E V  + ++  E +
Sbjct: 738 EEQKARAVNWRNRDD--------------QETQQRGEIVPLDEAVKKLVQLRDERR 779


>gi|293604689|ref|ZP_06687089.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292816858|gb|EFF75939.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 650

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/153 (11%), Positives = 41/153 (26%), Gaps = 4/153 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   +  ++   +R IY N G+  ++ P +   D  L K     D   + +F+
Sbjct: 266 GLIFWHPKGWALWQQVEQYMRAIYNNNGYQEVKAPQI--LDISLWKKTGHWDNYRENMFT 323

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + + +   L+        +       +       Y         +             
Sbjct: 324 -TESENRVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRG 382

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                      + ++    AD    +     D+
Sbjct: 383 FTQDDGHIFCTEEQLQDECADFTALLQKVYRDF 415



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 1/87 (1%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +     +      + PV          S       TQ L+  G R E  L   +    ++
Sbjct: 528 MLIENHAGAMPPWLAPVQAVVCCISEPSADYAAEITQSLKKQGFRVESDL-RGEKITRKI 586

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIK 448
           +    +  P  ++ G  E+  G + ++
Sbjct: 587 REHSLQKVPYILVVGDKEKQNGTVAVR 613


>gi|290985622|ref|XP_002675524.1| predicted protein [Naegleria gruberi]
 gi|284089121|gb|EFC42780.1| predicted protein [Naegleria gruberi]
          Length = 1373

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 54/417 (12%), Positives = 134/417 (32%), Gaps = 27/417 (6%)

Query: 23   IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN-----KGVFSLQDDD 77
            +  R R +  ++++++ +     +   +E       + P+ D+       K +  +  + 
Sbjct: 970  VYARERAILRLQSVFQLHAAVEFD---VE------SYFPNTDQIEGVLEKKNLCPVMFES 1020

Query: 78   GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            G+ +++  D +  LARY+A                          G   +  Q    ++ 
Sbjct: 1021 GKLMNIARDGSISLARYLARLPKDGYIKFLKRYSFLTIAKPSTKEGMGIETRQICSVDIV 1080

Query: 138  SSAETADAE--MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
             S      +  +  MM+  +         + + IN+  I+  IL+   +   ++      
Sbjct: 1081 GSRFGMITDAEIIKMMSRVVSFFTPNAGYWVLRINHSGIIYSILDYCDIPKSERDYVCAF 1140

Query: 196  VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
              +       +  +   L  G+    +     +  ++T +++  +  F +I   ++++++
Sbjct: 1141 ASKLKKHNYSWDKEKFILDRGKPIIKDLFRLHEAVDVTRQKLANI--FTNIGAREALNDI 1198

Query: 256  YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              L+          +   V  +    + Y      I    ++    Y   +        V
Sbjct: 1199 STLLDNFRIWGIDKSNFKVEFDTSLTNNYQRYSGLIFQFGIQKGTMYIPIINGGRYDKLV 1258

Query: 316  MNEKQKPVVFGSVGGGG-RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
             N      +  +V G   + D L         P    S          +  E+ST    +
Sbjct: 1259 SNFTLFDKLPHNVVGANIKLDKLFKYTTMVEHPPKLESPTE-------EGEENSTIPPFD 1311

Query: 375  MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
             G   +     + D   +      +L  AGIRA++    + +   Q+   D+     
Sbjct: 1312 SGVPQVLVFSENRDIKEERMKVADLLWEAGIRADLTYDDN-STQGQIYSCDKIKLDF 1367


>gi|255994086|ref|ZP_05427221.1| proline--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993754|gb|EEU03843.1| proline--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 582

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        ++   +I + IRN  +  G   I    L+ ++ L K     +  
Sbjct: 31  MIRKLASGVYGYMPMGLKALKKIENIIRNEMDAEGCQEILMSALQPAE-LWKESGRWNAY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              ++ + D   +   L  
Sbjct: 90  GPEMWRVCDRHDREFCLGP 108



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 10/101 (9%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +     ++      D D  +  +   + LR + I   +     +  G + K AD 
Sbjct: 468 IWPLPVAPYHVIITLINPSDKDQTALAEDIYEKLRKSNIDVILDDRDER-PGVKFKDADL 526

Query: 427 RNCPLAIIQGTGERSRGMLQIK--------DLAKGKELSRE 459
              P  I  G    + G ++ K        D+ K + +  +
Sbjct: 527 IGIPFRINVGRD-AADGKVEFKVRGSNYGMDMKKRETVVID 566


>gi|146283154|ref|YP_001173307.1| prolyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166980144|sp|A4VNB4|SYP_PSEU5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145571359|gb|ABP80465.1| prolyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 571

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R   +    +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWMPMGLRALRKAEAIVREEMNKAGALEVLMPAIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L+D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRLKDRHDREFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTK 138



 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSK-NFGNQ 420
                   +      + +  M ++++++ +        L  AG    +     K + G +
Sbjct: 459 DERGILWPDALAPFQIALVPMKYETEAVREATDKLYAELTAAGYEVLLDDRDKKTSPGVK 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
               +    P  I+      + GML+ K     +     + +  S+  +RV
Sbjct: 519 FADMELIGIPHRIVVSDRGLADGMLEYKHRRDAQPQQVAVSDILSFINSRV 569


>gi|134095943|ref|YP_001101018.1| prolyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166980129|sp|A4G8R0|SYP_HERAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|133739846|emb|CAL62897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA
           synthesis factor) [Herminiimonas arsenicoxydans]
          Length = 577

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 51/140 (36%), Gaps = 6/140 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R          +  PL++ ++ L +     D+ 
Sbjct: 31  MIKRLGSGIYTYMPIGLRVIRKVEAIVREEMNRAHAIELLMPLVQPAE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D  G+  +++    ++   + R   +++  +      Y I   FR+E+    
Sbjct: 90  GPELMRVKDRHGREYAIQPTSEEVVTDVVRSEIKSYRQLP--LNFYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETA 143
              +  +  + +  S    A
Sbjct: 148 GLMRGREFTMKDAYSFDRDA 167



 Score = 39.8 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 35/112 (31%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M +D      ++     + L  AG+   +     +  G  
Sbjct: 466 DDRGIIWPAALAPFEVVLCPMGYDRSESVKTETDKLYEALLAAGVDVILD-DRGERPGAM 524

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G      G L+ K        +  + +  ++ +AR+A
Sbjct: 525 FADWELIGAPHRIVIGERGLKEGALEYKGRRDADATAVALDDMLAFVQARLA 576


>gi|302798685|ref|XP_002981102.1| hypothetical protein SELMODRAFT_268427 [Selaginella moellendorffii]
 gi|300151156|gb|EFJ17803.1| hypothetical protein SELMODRAFT_268427 [Selaginella moellendorffii]
          Length = 676

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQ 435
             + ++  ++      Q  +  LR AG+  +  + + ++ G   +YA  D    P AI  
Sbjct: 558 CSVFSLVQNAGLDELAQSISVELRRAGLAVKTDI-TGRSIGK--RYARTDEIGIPFAITV 614

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + E   G + ++D    +++   ++          A
Sbjct: 615 DSSE---GGVTVRDRDSKEQIRVPVEQVTQLLTDLSA 648


>gi|319649026|ref|ZP_08003235.1| ThrZ protein [Bacillus sp. BT1B_CT2]
 gi|317389020|gb|EFV69838.1| ThrZ protein [Bacillus sp. BT1B_CT2]
          Length = 639

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/352 (10%), Positives = 98/352 (27%), Gaps = 8/352 (2%)

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           + +     + +      +       + +    +    + I   N      I +       
Sbjct: 293 YDEVHTPFMMNYRLWEKSGHWDHYQENMYFSEVDNTKFAIKPMNCPGHMLIFKNNLYSYR 352

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D         +         L G+  +      D++  F +   + SE I  +   +   
Sbjct: 353 DLPIRLAEYGQVHRHEFSGSLNGLLRVRT-FCQDDAHIFVREDQIESE-IKKVFHLIDQV 410

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
                 E    +        G N L  +SE   K+  +   IK       G  Y     +
Sbjct: 411 YRTIGFEYSVELSTRPDDSLGNNHLWEVSEGSLKNVLDDLAIKYQVNEGDGAFYGPKIDF 470

Query: 308 EAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                    ++                   +    + +   +    F        + ++ 
Sbjct: 471 HIKDALKRSHQCGTIQLDFQMPEKFDLTYINHNNEKVRPVVIHRAIFGSIDRFFGILIEH 530

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
              +         V I  + H    L         L+  GIR ++   S++  G +++ A
Sbjct: 531 FAGAFPVWLAPIQVQIIPISHI--HLEYCLGIKSELKQLGIRVQIN-ESNQKLGYKIREA 587

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
             +  P  ++ G  E     + ++   + ++ +  I++ +     ++   ++
Sbjct: 588 QVQKIPYTLVVGDNEIKENGVNVRKYGEEQQKNVSIESFKKNILQQIKTRSV 639



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 37/135 (27%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  +    R +  N  +D + TP +       K     D   + ++  
Sbjct: 265 GMPFYLPKGQIVRKELEKLSRELQNNASYDEVHTPFMMNYRLWEKS-GHWDHYQENMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +++             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDNTKFAIKPMNCPG-------HMLIFKNNLYSYRDLPIRLAEYGQVHRHEFSGSLNG 375

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 376 LLRVRTFCQDDAHIF 390


>gi|229011636|ref|ZP_04168819.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228749594|gb|EEL99436.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 639

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 68/232 (29%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +EL  ++   S   K  
Sbjct: 396 IEDEIKSVLAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAELALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTVQLDFQMPEKFDLNYIDENNEKRRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AGIR E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYINRIADKLAQAGIRVER 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            +   K  G +++ A  +  P  ++ G  E     + ++    G+E S  ++
Sbjct: 575 DIRDEK-LGYKIREAQMQKVPYVLVIGDKEMESEAVNVR--KYGEEKSEVVE 623



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 33/114 (28%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I   Y +  + TP +   +   K           ++  
Sbjct: 265 GMPFYLPKGQIIRNELEAFLREIQNEYNYQEVRTPFMMNQELWEKS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDHKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369


>gi|302801640|ref|XP_002982576.1| hypothetical protein SELMODRAFT_268613 [Selaginella moellendorffii]
 gi|300149675|gb|EFJ16329.1| hypothetical protein SELMODRAFT_268613 [Selaginella moellendorffii]
          Length = 676

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQ 435
             + ++  ++      Q  +  LR AG+  +  + + ++ G   +YA  D    P AI  
Sbjct: 558 CSVFSLVQNAGLDELAQSISVELRRAGLAVKTDI-TGRSIGK--RYARTDEIGIPFAITV 614

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + E   G + ++D    +++   ++          A
Sbjct: 615 DSSE---GGVTVRDRDSKEQIRVPVEQVTQLLADLSA 648


>gi|294676353|ref|YP_003576968.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacter
           capsulatus SB 1003]
 gi|294475173|gb|ADE84561.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacter
           capsulatus SB 1003]
          Length = 356

 Score = 56.8 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 94/336 (27%), Gaps = 37/336 (11%)

Query: 27  NRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD-DGQWISLRY 85
             I   +   +E  G   +   +L+ +++L     ++ R     +   D   G+ ++ R 
Sbjct: 8   RSIGQRLLAAFEAAGAVEVTPDILQPAEALLDLYGEDIRARA--YVTADPLRGEMMA-RP 64

Query: 86  DLTAPLARYVAENFDTIVFPCRTYRIGPVFR-NEKHGPGRFRQFIQCDVDNVGSSAETAD 144
           D T P+ +    +      P R   +G VFR  +  G  R  ++ Q   +        A 
Sbjct: 65  DFTVPVVQA---HMAEGAEPARYAYMGEVFRKQDHRGSARVAEYFQAGYEIFDREDPEAA 121

Query: 145 AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI--LEKIGLHGDDKLNERLIVLRAIDK 202
                 +   L                R  ++G+  L          +       R +++
Sbjct: 122 DAEVFALFAKLLKPLDLSATIGDIGLLRAAVEGLDTLPARKAALARHIWRPKRFHRLMER 181

Query: 203 L------------------DKFGLQGVKL-LLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                                    G++       R        + A + +E +  + + 
Sbjct: 182 YAGLVPVPESRAELLSGATSDAPWIGLRAPEEMAARIAVLQADAETAPIAAEDVARLDAL 241

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            ++              G  A       L      +   G +   +   ++  R      
Sbjct: 242 FALRCTADRAPAQLNDLGIAALAPAIARLERRLAALDARGIDLTALAFEASHGR------ 295

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
               E   GF    E   P  F  +  GGRYD L  
Sbjct: 296 -TTMEYYDGFVFSFETADPG-FPPIASGGRYDALTR 329


>gi|322379034|ref|ZP_08053437.1| threonyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380800|ref|ZP_08054906.1| threonyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321146804|gb|EFX41598.1| threonyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148526|gb|EFX43023.1| threonyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 601

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ +   S N    + PV I  +    D L   Q     L   G    M    ++
Sbjct: 482 FERFIAILTEHYSGNYPFFIAPVQIALVPVSMDQLEYAQEIYHKLNKRGFFVCMA-DKNE 540

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               +++  +++  P  ++ G  E ++G L I+D A GK+ +   +      EA++ +++
Sbjct: 541 TLSKRIRSLEKQKIPFIVVVGKEEVAQGSLAIRDRALGKQYTMLQEEFFQSMEAKMREVS 600



 Score = 43.7 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 30/106 (28%), Gaps = 3/106 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+R R+ + +      YG++P+  P +    SL +         + ++  
Sbjct: 227 GLPIWLPNGMRLRVRLENLLSKALLQYGYEPVRGPEI-LKSSLWQKSGHYQNYKENMY-F 284

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              D     ++        +   E+                  +  
Sbjct: 285 TTIDEVEYGIKPMNCVGHIKVY-EHALRSYRELPLRFYEYGVVHRH 329


>gi|89897864|ref|YP_514974.1| threonyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123722330|sp|Q256F9|SYT_CHLFF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|89331236|dbj|BAE80829.1| threoninyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 635

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 33/89 (37%), Gaps = 2/89 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + I + ++   + +++  G+  I TP L    SL +         + +++L
Sbjct: 256 GMPFFHPRGMIIWDALIGYWKRLHQLAGYKEILTPQLVNR-SLWEVSGHWSNYKENMYTL 314

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTI 102
           +  D +  +++         Y      + 
Sbjct: 315 KI-DEEDYAIKPMNCPGCMLYYKTRLHSY 342



 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/329 (8%), Positives = 82/329 (24%), Gaps = 7/329 (2%)

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            +   + +     + + +    +       + +  + I   DY I   N        +  
Sbjct: 279 HQLAGYKEILTPQLVNRSLWEVSGHWSNYKENMYTLKIDEEDYAIKPMNCPGCMLYYKTR 338

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                +       +           L G+ + +     D++  F     +  E ++I+  
Sbjct: 339 LHSYKEFPLRIAEIGHVHRYEISGALSGL-MRVRAFHQDDAHVFLTPEQVEEETLNILNL 397

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
              +     +    EL         G +EL  ++    +    ++          G  Y 
Sbjct: 398 VSELYSTFGLEYHLELSTRPEKATIGSDELWDLATAALERALINSNTPFVINPGDGAFYG 457

Query: 303 TGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
                          +       +           +    +     +    F      L 
Sbjct: 458 PKIDIHVKDAIQRTWQCGTIQLDMFLPERFELEYTNAQGEKSTPIMLHRALFGSIERFLG 517

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + ++  +           V + T+        + Q      +  G    +   S+++   
Sbjct: 518 ILIEHFKGRFPLWLSPEHVRLITVA--DRHQPRAQELATAWQQLGFVVTVD-DSNESVSK 574

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +++ A        +  G  E     L ++
Sbjct: 575 KIRNAQNMQVNYMVTLGDREIEENTLAVR 603


>gi|58337807|ref|YP_194392.1| threonyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227904456|ref|ZP_04022261.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|73919799|sp|Q5FIW3|SYT_LACAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58255124|gb|AAV43361.1| theronyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227867831|gb|EEJ75252.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 644

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 500 TYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNNEAHGEY 559

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   Q L   G R E+    ++  G +++ +  +  P  ++ G  E   G + ++    
Sbjct: 560 AEKVRQELAKRGFRVEVD-DRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYGT 618

Query: 453 GKELSREIKNNESWREA 469
            +E+S+ + +  +  +A
Sbjct: 619 DEEISKSLDDFINEIDA 635



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 55/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVAD--GYKHVYTPVLMNLDAY-KTSGHWAHYRDDMF 316

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 317 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 376

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                ++  A++  ++ D      I    + +   + K  D       
Sbjct: 377 REMTLNDGHTFVELDQVQSEFAKILKLIMDVYRDFDITDYYFRLSYRDPKNTDKYFANDE 436

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 437 MWERSQKM 444


>gi|307297853|ref|ZP_07577659.1| prolyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917113|gb|EFN47495.1| prolyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 580

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I D +R      G   I  P+++ ++ L       D     +  +
Sbjct: 38  GIYSFLPLGFRVLKKIEDIVRQEMNAIGSQEILMPIIQPAE-LWHETGRWDDYGPEMMRM 96

Query: 74  QDDDGQWISLRY 85
           QD   ++ +L  
Sbjct: 97  QDRHERFFTLGP 108



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 51/167 (30%), Gaps = 20/167 (11%)

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
            + G    +   S          G S  IS ++  L         +      +I T  + 
Sbjct: 420 KMNGYVTDEKGNSIHYIMGCYGWGVSRTISAIVEQLHDENGIIWPLAVAPFDIIVTAVNI 479

Query: 387 SDSL--SKYQMYTQMLRTAGIRAEMFLGS-SKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
            D +   K      +L  AG    +     S       K AD    P+ I  G    ++G
Sbjct: 480 KDPIVSEKSIQLYDILSEAGFEVLLDDREISPGMK--FKDADLIGIPVRITLGKK-LAQG 536

Query: 444 MLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           ++++K   + K L   I +                  L+  +KK L 
Sbjct: 537 IVEVKPRTEKKPLEVSIVDG--------------FDTLLEEIKKELS 569


>gi|298487059|ref|ZP_07005110.1| class II aminoacyl-tRNA synthetase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298158412|gb|EFH99481.1| class II aminoacyl-tRNA synthetase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 192

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 4/126 (3%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-AR 93
            I+   G +    P L   D+  +     +  +  +++  D  G+   L  + TA    R
Sbjct: 9   AIFIEAGAEEAIVPALWGEDTFIEKAGGSEIIS-QMWAFNDKAGRACCLIPEATALFQER 67

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
             +E           + +   +R E+   GR+R+F Q  ++ +G S + A      +   
Sbjct: 68  --SEALLNGRREAVFFYVARCYRYERPQAGRYREFTQLGLEILGPSPQQALQRSQTICTG 125

Query: 154 TLEAVG 159
            L+++G
Sbjct: 126 FLDSLG 131


>gi|319941771|ref|ZP_08016093.1| prolyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804704|gb|EFW01571.1| prolyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 582

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 37/90 (41%), Gaps = 4/90 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  +I + IR+     G   +  P+++ ++ L +     ++ 
Sbjct: 31  MIKKLAAGVYTYMPLGLRVIRKIENIIRDEMVRAGSIELLMPMVQPAE-LWQETGRWEKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLAR 93
              +  ++D   +   L+    ++   +AR
Sbjct: 90  GPELLRIKDRHMRDFVLQPTSEEVITDVAR 119


>gi|254516715|ref|ZP_05128774.1| prolyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219675138|gb|EED31505.1| prolyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 571

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 10/106 (9%), Positives = 37/106 (34%), Gaps = 4/106 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +++  ++   +R   +  G   +  P+++ ++ L +     ++    
Sbjct: 34  KLSSGLYTWMPMGLKVLRKVERVVREEMDAAGALEMAMPMVQPAE-LWQESGRWEQYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +  +QD   +   L     ++   + R    ++  +       +  
Sbjct: 93  LLRIQDRHNRDFCLGPTHEEVITDIVRNEISSYKQLPLNLYQIQNK 138


>gi|50364993|ref|YP_053418.1| threonyl-tRNA synthetase [Mesoplasma florum L1]
 gi|50363549|gb|AAT75534.1| threonyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 644

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 44/455 (9%), Positives = 108/455 (23%), Gaps = 84/455 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS- 72
           G          ++  I   ++     Y +  + TP++   +   K     D   + +F  
Sbjct: 261 GLPLWMPNGTIVKEEIKKYLKEKEWEYDYINVTTPVIGTVELYKKS-GHWDHYGEDMFQP 319

Query: 73  LQDDDG--QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
                G  +   LR             +        R+YR  P+   E     R+     
Sbjct: 320 FNGGSGSDEQFILRPMNCP-------HHVAVYKQEQRSYRDLPLRIAEHALQHRYESSGS 372

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                                   LE V                ++   + I     + L
Sbjct: 373 LTG---------------------LERVRAMELTDSHIFVRPDQVEAEFKSIYKLITEVL 411

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
               I +  +    +     VK    +   D               ++ ++  L+ID +K
Sbjct: 412 ETFNIQIDYLSLSLRDPEDKVKYYQDDKMWDE----------AEAALEKVLQDLNIDYKK 461

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + E            K      +    ++       +  ++                  
Sbjct: 462 CIGEAAFYGPKLDIQIKTAQNHEITVSTIQLDFLLPKKFDVTY----------------- 504

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                                   D          +           +   L+  +    
Sbjct: 505 -----------------------IDQNQEFKAPIMIHRGLIGTYERFIATLLEQTKGVLP 541

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  + I  +  + + +       + L+   IR  + L   +    +++ A     P
Sbjct: 542 LWLAPNQIEIIPVGSEEN-IEYANEVKKQLKKDFIRTHVDLRDER-LSYKIRDAQTSKIP 599

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             ++ G  ER    +  +     ++ + ++   ++
Sbjct: 600 YQLVLGDQERKDNSVTYRQYGSEQQTTIKLNEFKN 634


>gi|291280439|ref|YP_003497274.1| prolyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290755141|dbj|BAI81518.1| prolyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 573

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 46/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     +++  ++ + +R      G   +  P +  ++   +     +  
Sbjct: 31  MIRKVAAGIYNYLPAGLKVIKKVENIVRKYMNEAGAIELLMPAVVPAELWIES-GRWNVY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVFRNEK 119
            K +  L+D   +   +     ++   + R       +    +      +R     R   
Sbjct: 90  GKELLRLKDRHDRDFCIGPTHEEVVTDIVRNEVKSYKQLPLNLYQIQTKFRDEVRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D     AE +   M        EA G
Sbjct: 150 MRGREFIMKDAYSFDVDDEGAEKSYMLMYEAYCKIFEACG 189



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 33/96 (34%), Gaps = 1/96 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++    +  D ++  +     L+   +   +     +  G +   AD 
Sbjct: 462 IWPVQIAPFEVVIVPINTNSEDVVNLSETLYLKLKNNNVDVLIDDRDERA-GVKFNDADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              PL I  G    ++G ++I      + +  + ++
Sbjct: 521 VGYPLRINVGAKALAKGNVEIFIRKTKETVEVKKED 556


>gi|261253697|ref|ZP_05946270.1| prolyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937088|gb|EEX93077.1| prolyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 571

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSEEVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +     +A++A
Sbjct: 540 KEGNFEYKNRRNGEKTAVAMADIVEHIKAQLA 571


>gi|228939521|ref|ZP_04102109.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228972374|ref|ZP_04132985.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978988|ref|ZP_04139352.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228780699|gb|EEM28913.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228787391|gb|EEM35359.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820221|gb|EEM66258.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326940068|gb|AEA15964.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 640

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   K           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYNYQEVRTPFMMNQEVWEKS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 67/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++         T  L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYANEITLKLAQAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++ A  +  P  ++ G  E   G + ++    G+E S  + 
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYVLVIGDKEMENGAVNVR--KYGEEKSEVVA 623


>gi|15924673|ref|NP_372207.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927261|ref|NP_374794.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|156980000|ref|YP_001442259.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006467|ref|ZP_05145068.2| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|54039693|sp|P67585|SYT_STAAN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|54042050|sp|P67584|SYT_STAAM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225504|sp|A7X3A6|SYT_STAA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13701479|dbj|BAB42773.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247455|dbj|BAB57845.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|156722135|dbj|BAF78552.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           Mu3]
          Length = 645

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R  +    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVQIIPVNVD-LHYDYARQLQDELKSQGVRVSID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     D   + +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDHYQEDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
              D  + + LR           A    +    P R   +G + R E           R 
Sbjct: 321 MQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRG 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +     +  M+ D  +  G +   + +   + +  +   +   + 
Sbjct: 381 MTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 NKAENM 446


>gi|294628375|ref|ZP_06706935.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292831708|gb|EFF90057.1| threonyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 659

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/436 (11%), Positives = 122/436 (27%), Gaps = 56/436 (12%)

Query: 69  GVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            +FS  D+ G  +++        + R V E         R       +            
Sbjct: 269 DLFSFPDELGPGLAVFHPKG--GVVRKVME------DYSRRRHEVSGYEFVNTPHISKEH 320

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG---ILEKIGL 184
             +        +               L+A+    ++       R   +    + E   +
Sbjct: 321 LFEISGHLPHYAEGMFPPIQFDEQNYRLKAMNCPMHNLIFKSRGRSYRELPLRLFEFGTV 380

Query: 185 HGDDKLNERLIVLRAI-----DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
           +  +K      + R+      D       + +   L +       D  +   LT  ++++
Sbjct: 381 YRYEKSGVVHGLTRSRGFTQDDSHIYCTKEQMPQEL-DTLLTFVLDLLRDYGLTEFELEL 439

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
                S     S  +  E  +      +  N  +V              +++   I R  
Sbjct: 440 STRDDSDKFIGSDEDWAEATEALRQAAEKQNLPLVPDPGGAAYYGPKISVQVRDAIGRSW 499

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +  T    +     P     +     GS            R +   +    F        
Sbjct: 500 QMST---IQVDFNQPKRFNLEYTAADGS------------RRQPVMIHRALFGSIERFFG 544

Query: 360 VALKS-LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           V L+    +    +  +  V I   D     L K+ +  +   + G+R E+   S +   
Sbjct: 545 VLLEHYAGAFPAWLAPVQAVGIPVGDAHVGYLEKFALEAK---SKGLRVEVDASSDR-MQ 600

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++ A ++  P  II G  + + G +  +    G + +                  IP 
Sbjct: 601 KKIRNAQKQKVPFMIIVGDDDMNAGTVSFRY-RDGSQENG-----------------IPR 642

Query: 479 SELVSTVKKILQENKE 494
            + ++ +  +++   +
Sbjct: 643 DQALAKLVDVVERRAQ 658


>gi|296126971|ref|YP_003634223.1| ATP phosphoribosyltransferase regulatory subunit [Brachyspira
           murdochii DSM 12563]
 gi|296018787|gb|ADG72024.1| ATP phosphoribosyltransferase regulatory subunit [Brachyspira
           murdochii DSM 12563]
          Length = 370

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 148/390 (37%), Gaps = 43/390 (11%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG-VFSLQDDDGQWISLR 84
            N I+  +  IYE YG+  I+    E  +    +   +D      + +  + +G   SLR
Sbjct: 3   ENTIVSKLTKIYEEYGYKKIKLSKFEDYNLYNNY---KDFLQTEHILTFMNLNGNLQSLR 59

Query: 85  YDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETAD 144
            D+T  + + V ++ D      + + I  +++ ++     + +  Q  V+ +G+ ++ ++
Sbjct: 60  PDVTLSIVKKVLKDNDKYTK--KLFYIEDIYKIDEVSN-EYEEIQQVGVEIIGTLSKYSN 116

Query: 145 AEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLD 204
            E+  M  D+L+A+     +Y + I++   +  +++++ L  D K               
Sbjct: 117 LEIISMAIDSLKAINK---EYILEISSIDFMSALIDELNLDEDKK--------------- 158

Query: 205 KFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKGTI 263
              L+ +KL+  + + D         N+  +    ++S + I    K + E  + +    
Sbjct: 159 ---LETLKLIYSKNKHDLEKTLISN-NIDDKLKSYIISLIDISGNYKEVLEKIKNIIINE 214

Query: 264 AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPV 323
             ++ ++EL  +  +        N +   S   +   Y             ++ +     
Sbjct: 215 KMQQAYDELKSLLGVFENYNNFENILLDFSIESKLGYYN-----------GIIFKGYIKG 263

Query: 324 VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTM 383
              +V  GGRYD L+ +F          +     + +     + +  N  +   +++   
Sbjct: 264 NNDAVLSGGRYDKLLDKFNAHTQNKNKKNAIGFAVYMDKLYKKDTEKNEYDFDVLILYKS 323

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
             + + L K   + +      +R +++   
Sbjct: 324 GDEKELLKKVHSFIRE--GKKVRTDIYTDE 351


>gi|257067150|ref|YP_003153406.1| threonyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256799030|gb|ACV29685.1| threonyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 640

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + + N +L    ++    G+  I+TPL+   D   +     D   + ++  
Sbjct: 262 GFPFFHPNGMILMNELLGWWTDVLNENGYGEIKTPLILNEDLWHRS-GHWDHYKENMY-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              DG+  +++           A N  +    P R    G V R+E  G   
Sbjct: 320 TKIDGEAYAIKPMNCPGSVLTYASNQHSYRDLPIRLAEYGQVHRHELSGTLH 371



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 19/109 (17%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +      +   +   + ++ AG R  +   S    G +++ A        ++ G  
Sbjct: 540 QVEIIPVSDKFIDYCEDLKEKIKEAGFRVNIDYRSEG-VGYKIRQAQLMRTNYMLVVGEK 598

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           E + G L +++   G+E +                  + + E +  + K
Sbjct: 599 EETSGKLTVRN-RDGEETA-----------------DVSVDEFIEKISK 629


>gi|116670864|ref|YP_831797.1| threonyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|166223319|sp|A0JXC7|SYT_ARTS2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116610973|gb|ABK03697.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Arthrobacter
           sp. FB24]
          Length = 669

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 2/82 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                L+  GIRAE+ + S + F  +++ A +   P  +
Sbjct: 568 WLAPVQVVGIPVAEAFNDYMFDVVDQLKAVGIRAEVDISSDR-FPKKIRTASKDKIPFVL 626

Query: 434 IQGTGERSRGMLQIKDLAKGKE 455
           I G  +   G +  +    G +
Sbjct: 627 IAGGEDAEAGAVSFR-FRDGSQ 647


>gi|294793964|ref|ZP_06759101.1| threonine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455534|gb|EFG23906.1| threonine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 636

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++  + ++ I TP++  +  L +         + +++ 
Sbjct: 263 GFPFFLPKGMALRNELENFWREVHHEFEYEEIRTPII-LNKQLWETSGHWFHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              D +  +++          V +N            
Sbjct: 322 II-DEEEYAIKPMNCPGGI-LVYQNEMHSYRDFPLRY 356



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 41/120 (34%), Gaps = 19/120 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +      +   +   + +    +R E+    S+  G +++ A     P  +
Sbjct: 536 WMAPVQVKILPISEKHVEYAKDLAKQMHRDYVRVEVD-DRSEKIGYKIRQAQMAKVPYML 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E   G + ++                  +       ++P  E  +++K  ++E  
Sbjct: 595 VVGDKEVEEGTVNVR------------------KHGGDELGSVPFEEFFNSIKTEIKERN 636


>gi|229513024|ref|ZP_04402490.1| prolyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229349917|gb|EEO14871.1| prolyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 600

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G  + K+   G++ +  + +   + +A+
Sbjct: 540 DEGHFEYKNRRSGEKEAVAMASIIDFIQAK 569


>gi|269798232|ref|YP_003312132.1| threonyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094861|gb|ACZ24852.1| threonyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 636

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + +RN + +  R ++  + ++ I TP++  +  L +         + +++ 
Sbjct: 263 GFPFFLPKGMALRNELENFWREVHHEFEYEEIRTPII-LNKQLWETSGHWFHYRENMYTT 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              D +  +++          V +N            
Sbjct: 322 II-DEEEYAIKPMNCPGGI-LVYQNEMHSYRDFPLRY 356



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 41/120 (34%), Gaps = 19/120 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV +  +      +   +   + +    +R E+    S+  G +++ A     P  +
Sbjct: 536 WMAPVQVKILPISEKHVEYAKDLAKQMHRDYVRVEVD-DRSEKIGYKIRQAQMAKVPYML 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E   G + ++                  +       ++P  E  +++K  ++E  
Sbjct: 595 VVGDKEVEEGTVNVR------------------KHGGDELGSVPFEEFFNSIKTEIKERN 636


>gi|297198372|ref|ZP_06915769.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197714430|gb|EDY58464.1| threonyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 658

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 46/408 (11%), Positives = 103/408 (25%), Gaps = 41/408 (10%)

Query: 90  PLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
            + R V E                     + +         +    +       E  D  
Sbjct: 288 GIIRRVMEDYSRRRHEEEGYEFVYTPHATKGKLFEQSGHLDWYADGMYPPMQLDEGVDYY 347

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  M       +   R   +  +  R    G + +    G      R       D     
Sbjct: 348 LKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC 407

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
             + +   L     D +  F  G        D  +   + D EK        V      E
Sbjct: 408 TREQMSEEL-----DKTLTFVLGLLRDYGLTDFYLELSTKDPEK-------FVGSDEVWE 455

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
           +    L  ++E  ++          ++     +   T            +          
Sbjct: 456 EATETLRQVAE--KQGLPLVPDPGGAAFYGPKISVQTKDAIGRTWQMSTIQLDFNLPERF 513

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
            +     Y       +   +        I R    L    +       + PV    +   
Sbjct: 514 EL----EYTSPDGSKQRPVMIHRALFGSIERFFAVLLEHYAGAFP-AWLAPVQALGIPIG 568

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              +   + +    +  G+R E+   S +    +++ A ++  P  +I G  + + G + 
Sbjct: 569 DAHVEYLEKFAAAAKKQGLRVEVDSSSDR-MQKKIRNAQKQKVPFMVIAGDEDMAGGSVS 627

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
            +    G + +                  IP  E ++ + K+++E  +
Sbjct: 628 FRY-RDGSQENG-----------------IPFDEAIAKIAKVVEERAQ 657


>gi|194765983|ref|XP_001965104.1| GF21565 [Drosophila ananassae]
 gi|190617714|gb|EDV33238.1| GF21565 [Drosophila ananassae]
          Length = 749

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/226 (11%), Positives = 66/226 (29%), Gaps = 21/226 (9%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           EK   EL   ++  +    + N   +      G   + G   +  +   +    Q   + 
Sbjct: 531 EKYLGELEQWNDAEKALAESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQ 590

Query: 326 GSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                  R++       G+           +G    ++A+ +   +      + P  +  
Sbjct: 591 LDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQVMV 650

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +          Q     L  AG  +E    +      +++ A        ++ G  ERS 
Sbjct: 651 VPVGPAYDQYAQSVRDQLHAAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSS 710

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
             + ++                           + ++EL++ ++KI
Sbjct: 711 NTVNVR------------------TRDNKVHGEVSVAELITKLQKI 738



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D ++  Y   GF  + +P + Y+  L           + +FS + + 
Sbjct: 373 FQPRGAHIYNTLMDFMKAEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYAENMFSFEVEK 431

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 432 -EKFALKPMNCPG 443


>gi|157376262|ref|YP_001474862.1| prolyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|157318636|gb|ABV37734.1| prolyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 584

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 32/103 (31%), Gaps = 4/103 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +      G        +R+  ++   +R      G   I  P+++ +D L       ++ 
Sbjct: 46  MIRRNASGLYSWLPTGLRVLRKVEAIVREEMNKAGSVEILMPMVQPAD-LWVETGRFEKF 104

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPC 106
              +   QD   +   L     ++   + R    ++  +    
Sbjct: 105 GPELLRFQDRHNRDFVLGPTHEEVITDIVRKEVNSYKQLPLNL 147



 Score = 43.3 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 31/109 (28%), Gaps = 3/109 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                +  +      V I  M+       K   +   Q ++ AG          +  G  
Sbjct: 475 DDRGITWPDAIAPFRVGILPMNMHKSHRVKDMAEKLYQDMQDAGFEVLFDDRKERA-GVM 533

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               +    P  ++ G      G+ + K+   G++          + ++
Sbjct: 534 FADMELVGLPHVVVIGDRNIDNGVFEYKNRRTGEKQEIPFDQIIDFLKS 582


>gi|325287305|ref|YP_004263095.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322759|gb|ADY30224.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 647

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 32/111 (28%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +              +          +   
Sbjct: 510 NEDHRPVMIHRAPFGSMERFIALLLEHTGGNFPLWLIPDQA--IVLPVSEKYEKYAKKVL 567

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             L    IRA +    ++  G +++ A+    P  II G  E +   + ++
Sbjct: 568 NSLENDEIRALLD-NRNETVGKKIREAEMNKIPFMIIIGENEEATNTISVR 617



 Score = 41.4 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 6/61 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS------LGKFLPDEDRPN 67
           G      K   +R R+ + ++   +  G++ + TP +   +         K+  D  +P 
Sbjct: 263 GLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHIGQKELYVTSGHYAKYGEDSFQPI 322

Query: 68  K 68
           K
Sbjct: 323 K 323


>gi|302518003|ref|ZP_07270345.1| threonyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302426898|gb|EFK98713.1| threonyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 658

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/401 (9%), Positives = 96/401 (23%), Gaps = 46/401 (11%)

Query: 90  PLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
            + R   E                     +           +    +       E  D  
Sbjct: 288 GIIRRAMEDYSRRRHEEEGYEFVYSPHTTKGALFQKSGHLDWYADGMYPPMQLDEGVDYY 347

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  M       +   R   +  +  R    G + +    G      R       D     
Sbjct: 348 LKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYC 407

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
             + +   L +  T    +  +   L    +++           S  +  + V      E
Sbjct: 408 TKEQMAEELDKTLTFVL-NLLRDYGLDDFYLEL-----------STKDEKKFVGSDEVWE 455

Query: 267 KGFNELVVISELV----------RKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPV 315
           +    L  ++E                     ++    I R  +  T    +     F +
Sbjct: 456 EATATLQQVAEKQGLPLVPDPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFDL 515

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
                       V                 +    F        V L+    +      +
Sbjct: 516 SYTAADGSRQRPVM----------------IHRALFGSIERFFAVLLEHYAGAMPPW--L 557

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
            PV    +      +   + +    R  G+R ++   S +    +++   ++  P  +I 
Sbjct: 558 APVQAVGIPVGDAHVPYLKEFAAEARRKGLRVDVDASSDR-MQKKIRNHQKQKTPFMVIV 616

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           G  + + G +  +    G + +   K+    +   V +  +
Sbjct: 617 GDDDMNAGTVSFRH-RDGSQENGIPKDEAIAKLLDVVERRV 656


>gi|316969279|gb|EFV53404.1| transcriptional enhancer factor TEF-5 [Trichinella spiralis]
          Length = 1587

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 66/430 (15%), Positives = 128/430 (29%), Gaps = 39/430 (9%)

Query: 13   RG-FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            +G F D        R +    +  ++  +G   +  PLL       + L +         
Sbjct: 1002 KGNFQDQL---AMCRTKCETKLAALFHLFGGVHVNAPLLVPR---TRILSESYPNRME-- 1053

Query: 72   SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK-HGPGRFRQFIQ 130
             L + DG  ++L YDL    AR+ A      +       +     N           F  
Sbjct: 1054 -LVNTDGMVLNLPYDLRYNFARFAARQKIMRLKRYEIGTVFRQRENPMNPQELLECAFDI 1112

Query: 131  CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                   + A      +   + D    V     D  I IN+  +L   +E   +      
Sbjct: 1113 LAPQPDFTHAIVELFSLISAVVDEFSFVKYS--DLQIKINHLGLLKAFMENCSVTESSMQ 1170

Query: 191  NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID--L 248
             + L+ L +                 + +                    +V  +S +  L
Sbjct: 1171 QKFLLTLSS----------------LKSKFQREYAICDLLKEWKITAPKLVELVSKERCL 1214

Query: 249  EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
              ++    +  +           ++ ++E+V         I +    V     YT  V+ 
Sbjct: 1215 SDALQWFAQDAQQYELYLSELKRIISMAEMV----CGQLAICVDFGYVVYPNIYTDVVFC 1270

Query: 309  AILGFPVMNEKQKPVVFGSVGGG--GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-KSL 365
                  +   ++  V  G           G   + +   + A G S    RL   L +  
Sbjct: 1271 VTECRKLSKLREDCVAIGGCYSNLMRNLLGPGFKNQPVPLTAVGLSFWFDRLFFTLAQDT 1330

Query: 366  ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +   N+     VLI ++  DS  + +     +MLR   I  + +  SS++    + +A 
Sbjct: 1331 AACEQNLDSSSRVLIISIGQDSK-IEQKFRLMKMLRANKIPTDCWYESSESLDQAICWAR 1389

Query: 426  RRNCPLAIIQ 435
            R      I+ 
Sbjct: 1390 RMYIGCVILL 1399


>gi|148909063|gb|ABR17634.1| unknown [Picea sitchensis]
          Length = 682

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   IR  I D  +  +  +G++ + TP ++ +D L K     +   + +F+ 
Sbjct: 306 GLVFWHPRGAIIRQNIEDFWKRTHIQHGYELLYTPHVDKAD-LWKISGHLEFYKENMFNQ 364

Query: 74  QDDDGQWISLRYDLTA 89
            D + +   LR     
Sbjct: 365 MDIEDELYQLRPMNCP 380



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 38/114 (33%), Gaps = 20/114 (17%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +   Q     ++   IRAE+  G        ++ ++    PL  
Sbjct: 581 WLSPVQARILPVTDTQVPYCQKVVAKMKEKDIRAELSYGER--LSKLIRNSETHKIPLMA 638

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           + G  E   G L ++    G+                    T+ I E++  +KK
Sbjct: 639 VVGPREVESGTLTVRTRHGGE------------------LGTMTIDEVIEKIKK 674


>gi|153812461|ref|ZP_01965129.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174]
 gi|149831386|gb|EDM86474.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174]
          Length = 657

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 66/222 (29%), Gaps = 4/222 (1%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           EK   E  V +E           + I  T   G   + G   +         E     + 
Sbjct: 431 EKYIGEPEVWNETEEDIRQMLEELNIPFTEDVGEAAFYGPKVDINAKNVYGKEDTMITIQ 490

Query: 326 GSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                  ++D       G           S+G     +A    + +      + P  +  
Sbjct: 491 WDALLAEQFDMYYIDENGDKKRPCIIHRTSMGCYERTLAWLIEKYAGMFPTWLCPEQVRV 550

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +       +        ++ AGIR  +    S+  G +++ A     P  ++ G  E   
Sbjct: 551 IPISEKFNAYADKVEAQMKEAGIRCSVD-RRSEKMGYKIREARLERVPYMLVVGAKEEEE 609

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           G + ++    G E  +++    +  +  +   TI   E+   
Sbjct: 610 GKVSVRSRYLGDEGMKDLGEFIAAIKEEIKNKTIRKIEVEEE 651



 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +   +   I +     G+   +TPL+  SD   K     D    G+F L
Sbjct: 260 GLPLIMPNGVIMMQELQRWIEDEETKRGYVRTKTPLMAKSDLY-KISGHWDHYKDGMFVL 318

Query: 74  QDD--DGQWISLRYDLTAPLARYV--AENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            D+  D +  +LR  +T P   YV  AE       P R      +FRNE  G   
Sbjct: 319 GDEETDKEVFALRP-MTCPFQYYVYKAEQHSYRDLPLRYGETSTLFRNEDSGEMH 372


>gi|109897601|ref|YP_660856.1| prolyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123171506|sp|Q15WD6|SYP_PSEA6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109699882|gb|ABG39802.1| prolyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 571

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+ N++   +R   +  G   I  P+++ +D L +     D     
Sbjct: 34  KLASGLYTWLPTGLRVLNKVAQIVREEMDRAGSLEILMPVVQPAD-LWQESGRWDEYGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +  ++D   +   L  
Sbjct: 93  LLRIKDRHYRDFVLGP 108



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 30/104 (28%), Gaps = 5/104 (4%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSK-NFGNQLK 422
                +      V I  M+       +   +     L+ AG   E+     K   G    
Sbjct: 466 GIIWPDAIAPFKVAIVPMNMHKSHRIQQVAEDLYAQLKAAG--VEVLFDDRKERPGVMFN 523

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +    P  I+ G        ++ K+   G++   +I     +
Sbjct: 524 DMELVGVPHTIVIGERNLDEQKVEYKNRRSGEKQLIDIPQLAEF 567


>gi|78779284|ref|YP_397396.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus str. MIT 9312]
 gi|78712783|gb|ABB49960.1| histidyl-tRNA synthetase-like protein [Prochlorococcus marinus str.
           MIT 9312]
          Length = 383

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 120/376 (31%), Gaps = 44/376 (11%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVA 96
           Y+ +G++ +    +   +++             +  +       + LR ++T  + +  +
Sbjct: 26  YKLWGYEEVSPSFINTLETIK---GRGVIEENEIVGIV--SNNSLCLRPEMTTSIVKLSS 80

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
                   P R +  G VF  +++    F+   +          +T   E+ ++      
Sbjct: 81  TRLINKKRPIRLFTNGIVFDKKQNNKNLFKLQEKLHSGIELIGYDTKYPEIEVINI---- 136

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
                             L   ++ I L  D  L+  +   + +D +           + 
Sbjct: 137 ------------------LFDAIDNINLKDDCNLSLLVSTTKIMDLILNKYKNNNFEEIK 178

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           +   +   D      +  +   I+   L    E     + + +K      K  ++L  + 
Sbjct: 179 KSLVNLDQDKLSKLGIEEDDKYILKDLLFTRGEPI--AILKKLKSIYGSSKTLDDLNFLF 236

Query: 277 ELV-RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
           E++ + S     ++++  T    L  Y G V++ I                 +  GGRYD
Sbjct: 237 EILSKISNKYGVKLQLDPTFQPHLNLYEGIVFQLI--------GDSGNNKNVIAKGGRYD 288

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            LV  F        G    IS  I+       +    ++     I  M  DS+ L K   
Sbjct: 289 ELVRFFSPNEKILNGIGFTISIDIL------RNLIKEEKTDKKKILLMFKDSNLLEKGMN 342

Query: 396 YTQMLRTAGIRAEMFL 411
             + L+  G  A + L
Sbjct: 343 KQKELQKRGNIAVLHL 358


>gi|70726352|ref|YP_253266.1| glycyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|123762313|sp|Q4L6R5|SYG_STAHJ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|68447076|dbj|BAE04660.1| glycyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 463

 Score = 56.8 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/219 (8%), Positives = 52/219 (23%), Gaps = 4/219 (1%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  + +       +  +                   +            +   ++     
Sbjct: 248 QWLKDLNINEENMRLRDHDEEELSHYSN-ATTDIEYRFPFGWGELWGIASRTDFDLKKHS 306

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               E  K     +      Y    S    +   A          +   K   +  +   
Sbjct: 307 EHSGEDFKYHDPETNEKYVPYCIEPSLGADRVTLAFLCDAYEEEGVEGSKDARTVMHFHP 366

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P     +        +     + L +   +  +    S++ G + +  D    P  I
Sbjct: 367 ALAPYKAAVLPLSKKLSEEAIKIFEQLSS---KFAIDFDESQSIGKRYRRQDEIGTPYCI 423

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + ++D    +++   I   E++   +VA
Sbjct: 424 TFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAEKVA 462


>gi|329724705|gb|EGG61211.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 645

 Score = 56.4 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/371 (10%), Positives = 95/371 (25%), Gaps = 18/371 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +           +   + +         Q D+       E     +  M  
Sbjct: 279 RYIVDK--EVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                +   +   +  +  R    G + +    G     +R+  +   D         +K
Sbjct: 337 PHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIK 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +   +   D  K      +    +      D  K   +     K     ++  +EL
Sbjct: 397 EEF-KRVVNMIQDVYKDFGF-KDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDEL 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +  E           I  ++     L+                           +   G
Sbjct: 455 GLTYE---------EAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIG 505

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +               +        +    +  + +         V I  ++ D      
Sbjct: 506 QDGEQHRPVVIHRGVVSTME---RFVAFLTEETKGAFPTWLAPMQVEIIPVNVD-LHYDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            ++    L++ G+R E+    ++  G +++ A  +  P  I+ G  E     + ++    
Sbjct: 562 ARLLQDELKSQGVRVEID-DRNEKMGYKIREAQMKKIPYQIVVGDQEVENQEVNVRKYGS 620

Query: 453 GKELSREIKNN 463
            K+ S E    
Sbjct: 621 EKQESVEKDEF 631


>gi|327481520|gb|AEA84830.1| prolyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 571

 Score = 56.4 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R   +    +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWMPMGLRALRKAEAIVREEMNKAGALEVLMPAIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L+D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRLKDRHDREFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTK 138


>gi|313792096|gb|EFS40197.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801952|gb|EFS43186.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313812897|gb|EFS50611.1| threonyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313838778|gb|EFS76492.1| threonyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314962753|gb|EFT06853.1| threonyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|315077970|gb|EFT50021.1| threonyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327453186|gb|EGE99840.1| threonyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 689

 Score = 56.4 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 86/252 (34%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y    S  +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADSTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQVNGVVLDEA 662


>gi|289425232|ref|ZP_06427009.1| threonine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289154210|gb|EFD02898.1| threonine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 684

 Score = 56.4 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 86/252 (34%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 409 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQ 468

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 469 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 528

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y    S  +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 529 EYAAADSTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 587

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 588 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 645

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 646 GSQVNGVVLDEA 657


>gi|282916943|ref|ZP_06324701.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283770747|ref|ZP_06343639.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282319430|gb|EFB49782.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|283460894|gb|EFC07984.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 645

 Score = 56.4 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R  +    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVQIIPVNVD-LHYDYARQLQDELKSQGVRVSID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     D   + +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDHYQEDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
              D  + + LR           A    +    P R   +G + R E           R 
Sbjct: 321 MQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRG 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +     +  M+ D  +  G +   + +   + +  +   +   + 
Sbjct: 381 MTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 NKAENM 446


>gi|253583464|ref|ZP_04860662.1| threonine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251834036|gb|EES62599.1| threonine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 637

 Score = 56.4 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 50/126 (39%), Gaps = 4/126 (3%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +    +      + + ++    +         V I T++   + +   +   +
Sbjct: 501 EKHRPVMIHRVVYGSIERFIGILIEHFAGAFPLWLAPTQVKILTIN--DEVVPYAKEIFK 558

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            L+  GIRAE+    +++ G +++ A+ +   P+ +I G  E     + I+     ++ S
Sbjct: 559 ALQERGIRAEID-DRAESIGYKIREANGKYKIPVQLILGKNEVENREVNIRKFGSQQQES 617

Query: 458 REIKNN 463
            ++   
Sbjct: 618 MKLDEF 623



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN ++D  R  +   G+  I TP++   + L +         + +++ 
Sbjct: 260 GFPIFLPKGMVIRNTLIDLWRREHTLAGYQEITTPIMLNKE-LWEISGHWFNYRENMYTS 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 319 TI-DDTEFAIKPMNCPG 334


>gi|153835582|ref|ZP_01988249.1| prolyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148867822|gb|EDL67058.1| prolyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 571

 Score = 56.4 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSEEVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +     +A++ 
Sbjct: 540 KEGNFEYKNRRSGEKTAVAMADIVEHVKAQLQ 571


>gi|24215989|ref|NP_713470.1| prolyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|81846319|sp|Q8F148|SYP_LEPIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24197213|gb|AAN50488.1|AE011490_3 prolyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 576

 Score = 56.4 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++  +I   +R    + G    + P+L  SD   +         K +F +
Sbjct: 38  GLYFYLPLGLKVLKKIEQIVREEMNSTGALEFDLPILTPSD-FWEQSGRWSAMGKEMFRI 96

Query: 74  QDDDGQWISLRY 85
           QD      +L  
Sbjct: 97  QDRHDLSYALGP 108


>gi|39936469|ref|NP_948745.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|73919820|sp|Q6N4D3|SYT_RHOPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|39650325|emb|CAE28847.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 658

 Score = 56.4 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 99/356 (27%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD--KLNE 192
              S       E         +    KR      +N    +      +  + D   +L E
Sbjct: 305 WETSGHWEWYRENMFAAQSAGDDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRLAE 364

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             +V R        GL  V+        D++  F   A L  E I I    LS   +   
Sbjct: 365 FGVVHRYEPSGAMHGLMRVRG----FTQDDAHVFCTEAQLAEECIKINDLILSTYSDFGF 420

Query: 253 HELYE-LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE----YYTGCVY 307
                  +        G +E+   +E V  +  +  + K  + I   +      + G  +
Sbjct: 421 EGELTVKLSTRPEKRVGTDEMWDHAERVMATVLSEIKAKGGNRIKTEINPGEGAFYGPKF 480

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALK 363
           E +L   +  + Q            R+        G               + R    L 
Sbjct: 481 EYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFTGILI 540

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLK 422
              +    +  + PV +      S+     +     LR AG+RA++ L + K NF    +
Sbjct: 541 EHYAGNFPLW-LAPVQVVVTTITSEGDDYAKKVLAALRKAGLRADIDLRNEKINFKV--R 597

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
                  P  ++ G  E     + ++ L    +         +          +  
Sbjct: 598 EHSLAKVPALLVVGKKEAESHSVSVRRLGSDGQKVMPTDEAIAALVDEATPPDVKR 653


>gi|108804139|ref|YP_644076.1| Ser-tRNA(Thr) hydrolase/threonyl-tRNA synthetase [Rubrobacter
           xylanophilus DSM 9941]
 gi|123368184|sp|Q1AWG4|SYT_RUBXD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|108765382|gb|ABG04264.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rubrobacter
           xylanophilus DSM 9941]
          Length = 639

 Score = 56.4 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 37/100 (37%), Gaps = 2/100 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      L   +   + L   G+R E+   S  +   +++   R+  P  +
Sbjct: 538 WLSPVQAVVIPVADRHLEYARRVREELSEGGLRVEVD-DSPNSMQKKIRENARQKTPYLL 596

Query: 434 IQGTGERSRGMLQIKDLAKGK-ELSREIKNNESWREARVA 472
           I G  E   G + ++   +GK +    ++         VA
Sbjct: 597 IVGDREEEAGTVNVRRRGEGKRQTEMGLRGFLERVRGEVA 636



 Score = 37.1 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 22/77 (28%), Gaps = 1/77 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ +   +R +   +G+  + T  L       +     +     +F  
Sbjct: 260 GIPLFLPKGETLRHLMEGFVREVQTRHGYQHVWTGHLVNERLYARS-GHLEHYRDAMFPP 318

Query: 74  QDDDGQWISLRYDLTAP 90
             D      L+      
Sbjct: 319 MRDGEVSYRLKPMNCPS 335


>gi|326789266|ref|YP_004307087.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326540030|gb|ADZ81889.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 586

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R ++   G+  I TP++   + L +     D   + +++ 
Sbjct: 214 GFPFFLPKGMVLKNLLIDYWRKLHTREGYVEISTPMMLNKE-LWETSGHWDHYRENMYTT 272

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 273 VI-DDTDFAIKPMNCPG 288



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 68/255 (26%), Gaps = 3/255 (1%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +T E   ++     +  +       EL            +  V +E ++
Sbjct: 334 DDAHIFMTQEQITDEIKGVVRLIDEVYSKFGFKYHVELSTRPENSIGSDEDWNVATEGLK 393

Query: 281 -KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
                      I+               E  +G        +      V     Y G   
Sbjct: 394 KALDEMQLEYVINEGDGAFYGPKIDFHLEDSIGRTWQCGTIQLDFQLPVRFEAEYIGADG 453

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
           +     +        I R I  L    +    +  + PV +  +                
Sbjct: 454 KKHRPIMIHRVVFGSIERFIGILIEHYAGKFPLW-LAPVQVKVLPISDKFSEYGAFVMAE 512

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L+  GIR E+     +  G +++ A     P  ++ G  E    ++ I+   +  +    
Sbjct: 513 LQKQGIRCEID-NRDEKIGYKIREAQLGKVPYMVVVGQKEVESNLVTIRRRDESTQEGYS 571

Query: 460 IKNNESWREARVAQI 474
           I+         +   
Sbjct: 572 IQEFVQLLNNEIEGF 586


>gi|303318040|ref|XP_003069022.1| threonyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240108703|gb|EER26877.1| threonyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320036822|gb|EFW18760.1| threonyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 598

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 14/122 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y+ YGF+ + TP + Y  SL +           ++ +
Sbjct: 151 GSPYFHPDGAHIFNKLMSFLRAQYKQYGFEEVITPTM-YKKSLWEKSGHWHIYKDDMYEV 209

Query: 74  QDDD------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           +                +   L+          + ++       P R     P+ RNE  
Sbjct: 210 RGRGATGQTVDVEIGEDEQYGLKPMNCPGHCVLFASKTRSYRSLPVRFAEFSPLHRNEIS 269

Query: 121 GP 122
           G 
Sbjct: 270 GS 271


>gi|172036410|ref|YP_001802911.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171697864|gb|ACB50845.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 666

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 1/92 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +    +     +     L+ AG R E+   S +  G Q++ ++    P+  
Sbjct: 564 WLAPIQLRLLPVSDEQQDYAKTVAIRLKKAGYRVEVD-TSGERLGKQIRLSELEKIPVVA 622

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           I G  E     L I+    G   +  + +   
Sbjct: 623 IVGKREVESQTLSIRTRQGGDLGTITVADLRE 654



 Score = 40.2 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      +   +R  I D  RN +   G+  + TP +   D L K     D   + +F
Sbjct: 289 GLVFWHPRGAMMRYLIEDYWRNAHLEDGYQFLYTPHVANLD-LWKTSGHWDFYRENMF 345


>gi|88195489|ref|YP_500293.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|123003455|sp|Q2FXP7|SYT_STAA8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|87203047|gb|ABD30857.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|329728437|gb|EGG64874.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 645

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R  +    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVQIIPVNVD-LHYDYARQLQDELKSQGVRVSID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     D   + +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDHYQEDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
              D  + + LR           A    +    P R   +G + R E           R 
Sbjct: 321 MQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRG 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +     +  M+ D  +  G +   + +   + +  +   +   + 
Sbjct: 381 MTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 NKAENM 446


>gi|323495331|ref|ZP_08100409.1| prolyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323310402|gb|EGA63588.1| prolyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSEEVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGVPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +     +A++A
Sbjct: 540 KEGNFEYKNRRSGEKTAVAMADIVEHVKAQLA 571


>gi|290989139|ref|XP_002677200.1| threonyl-tRNA synthetase [Naegleria gruberi]
 gi|284090806|gb|EFC44456.1| threonyl-tRNA synthetase [Naegleria gruberi]
          Length = 672

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/391 (10%), Positives = 97/391 (24%), Gaps = 30/391 (7%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           +   +   +    ++      +            F        G   + A+    + +  
Sbjct: 301 FFLPHGQRLFNSIQSLMRNEYWHRGYSEVQTPNVFHSDLWKTSGHWDKYAENMFVLEIDK 360

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
              ++       H  +   +      E      D  +  R  +  A+  + +        
Sbjct: 361 AQHSLKPMNCPSHCLMFKHRT-RSYRELPIRFADFGVLHRNELKGALTGMTRLRKFQQDD 419

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMV-----SFLSIDLEKSMHELYELVKGTIAGEKG 268
                R D       GA    + I  +       FLS   EK + E+ +  +     E  
Sbjct: 420 AHIFCRPDQIKSEIMGALRMMQDIYKIFGFGFRLFLSTRPEKYLGEISQWDEAEGQLEAA 479

Query: 269 FNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVV 324
            NE     +              I IS  + R  +  T    ++  + F +    +    
Sbjct: 480 LNEFGHSWQKNEGDGAFYGPKIDILISDALKREHQCATVQLDFQLPIRFDLTYAAEDKTE 539

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
              V                      F      L +A +                   + 
Sbjct: 540 SRPVIVHRAI----------------FGSLERFLAIATEHFGGKWPFWLSPRQA--IVVP 581

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
             +      +   + L  A    ++ L S++    +++ A        ++ G  E     
Sbjct: 582 VSNKCNEYAEKVQKRLHEAKYYVDVDLSSNR-IDKKIRNAQLSQYNYILVVGPKEMESDS 640

Query: 445 LQIKDLAK-GKELSREIKNNESWREARVAQI 474
           + I+      ++  + I+      E    Q 
Sbjct: 641 VNIRIRDSDKEQGVKTIEELLIEFEGNKVQF 671



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ N I   +RN Y + G+  ++TP + +SD L K     D+  + +F L
Sbjct: 298 GMVFFLPHGQRLFNSIQSLMRNEYWHRGYSEVQTPNVFHSD-LWKTSGHWDKYAENMFVL 356

Query: 74  Q-DDDGQWI 81
           + D     +
Sbjct: 357 EIDKAQHSL 365


>gi|21283355|ref|NP_646443.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49483925|ref|YP_041149.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486509|ref|YP_043730.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650554|ref|YP_186567.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87161367|ref|YP_494324.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|148268163|ref|YP_001247106.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394230|ref|YP_001316905.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221788|ref|YP_001332610.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509896|ref|YP_001575555.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142567|ref|ZP_03567060.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317174|ref|ZP_04840387.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732334|ref|ZP_04866499.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253734533|ref|ZP_04868698.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257425798|ref|ZP_05602222.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428464|ref|ZP_05604862.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431098|ref|ZP_05607475.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433781|ref|ZP_05610139.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436697|ref|ZP_05612741.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257794068|ref|ZP_05643047.1| threonyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415772|ref|ZP_05682043.1| threonyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258421991|ref|ZP_05684911.1| threonyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258424099|ref|ZP_05686981.1| threonyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|258438251|ref|ZP_05689535.1| threonyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443709|ref|ZP_05692048.1| threonyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258445920|ref|ZP_05694096.1| threonyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448399|ref|ZP_05696516.1| threonyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258451803|ref|ZP_05699825.1| threonyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258454120|ref|ZP_05702091.1| threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase [Staphylococcus
           aureus A5937]
 gi|269203301|ref|YP_003282570.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893178|ref|ZP_06301412.1| threonyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282904254|ref|ZP_06312142.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282908994|ref|ZP_06316812.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911310|ref|ZP_06319112.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914479|ref|ZP_06322265.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282919448|ref|ZP_06327183.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282920223|ref|ZP_06327948.1| threonyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282924825|ref|ZP_06332491.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282927813|ref|ZP_06335424.1| threonyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|283958434|ref|ZP_06375885.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024731|ref|ZP_06379129.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|293503557|ref|ZP_06667404.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510572|ref|ZP_06669277.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537114|ref|ZP_06671794.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|294848704|ref|ZP_06789450.1| threonyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295405993|ref|ZP_06815801.1| threonyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295428254|ref|ZP_06820883.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296274890|ref|ZP_06857397.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207604|ref|ZP_06924039.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245081|ref|ZP_06928958.1| threonyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297590783|ref|ZP_06949421.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300911686|ref|ZP_07129130.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380726|ref|ZP_07363395.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|38258392|sp|Q8NW68|SYT_STAAW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56749381|sp|Q6G8P3|SYT_STAAS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56749410|sp|Q6GG23|SYT_STAAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71153575|sp|Q5HF90|SYT_STAAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123735974|sp|Q2FG54|SYT_STAA3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|172048941|sp|A6QHL6|SYT_STAAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083625|sp|A6U2F0|SYT_STAA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083626|sp|A5ITK7|SYT_STAA9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083627|sp|A8Z2J8|SYT_STAAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|38492559|pdb|1NYQ|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With An Analogue Of Threonyl
           Adenylate
 gi|38492560|pdb|1NYQ|B Chain B, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With An Analogue Of Threonyl
           Adenylate
 gi|38492561|pdb|1NYR|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With Atp
 gi|38492562|pdb|1NYR|B Chain B, Structure Of Staphylococcus Aureus Threonyl-Trna
           Synthetase Complexed With Atp
 gi|21204795|dbj|BAB95491.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49242054|emb|CAG40753.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244952|emb|CAG43413.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284740|gb|AAW36834.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87127341|gb|ABD21855.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|147741232|gb|ABQ49530.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Staphylococcus
           aureus subsp. aureus JH9]
 gi|149946682|gb|ABR52618.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374588|dbj|BAF67848.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368705|gb|ABX29676.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253723934|gb|EES92663.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253727474|gb|EES96203.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257271492|gb|EEV03638.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275305|gb|EEV06792.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278046|gb|EEV08694.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281874|gb|EEV12011.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284048|gb|EEV14171.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257788040|gb|EEV26380.1| threonyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839365|gb|EEV63838.1| threonyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257842035|gb|EEV66464.1| threonyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257845720|gb|EEV69752.1| threonyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257848295|gb|EEV72286.1| threonyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851115|gb|EEV75058.1| threonyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257855162|gb|EEV78101.1| threonyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858367|gb|EEV81252.1| threonyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860515|gb|EEV83341.1| threonyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257863572|gb|EEV86329.1| threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase [Staphylococcus
           aureus A5937]
 gi|262075591|gb|ACY11564.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941163|emb|CBI49550.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282313191|gb|EFB43587.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317258|gb|EFB47632.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282321660|gb|EFB51985.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325005|gb|EFB55315.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327258|gb|EFB57553.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282590323|gb|EFB95402.1| threonyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594571|gb|EFB99556.1| threonyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282595872|gb|EFC00836.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282764496|gb|EFC04622.1| threonyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283790583|gb|EFC29400.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817366|gb|ADC37853.1| Threonyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|290919959|gb|EFD97027.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095223|gb|EFE25488.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466463|gb|EFF08984.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|294824730|gb|EFG41153.1| threonyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968990|gb|EFG45011.1| threonyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295127654|gb|EFG57291.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296887621|gb|EFH26519.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178161|gb|EFH37409.1| threonyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297575669|gb|EFH94385.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300887107|gb|EFK82308.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333348|gb|ADL23541.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751509|gb|ADL65686.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340725|gb|EFM06656.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312437859|gb|ADQ76930.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|312830061|emb|CBX34903.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315130684|gb|EFT86670.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315195587|gb|EFU25974.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315198621|gb|EFU28949.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140439|gb|EFW32293.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143977|gb|EFW35746.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314355|gb|AEB88768.1| Threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727674|gb|EGG64130.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 645

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R  +    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVQIIPVNVD-LHYDYARQLQDELKSQGVRVSID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     D   + +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDHYQEDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
              D  + + LR           A    +    P R   +G + R E           R 
Sbjct: 321 MQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRG 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +     +  M+ D  +  G +   + +   + +  +   +   + 
Sbjct: 381 MTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 NKAENM 446


>gi|224826514|ref|ZP_03699615.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224601115|gb|EEG07297.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 632

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/232 (9%), Positives = 61/232 (26%), Gaps = 14/232 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   +R      G+  I TP++     L +     +   + +F+ 
Sbjct: 261 GMVFWHPKGWQLWQSVEQYMRATLAEAGYQEIRTPMVMDR-ILWEKSGHWENYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +++        +   +   +       Y         +              
Sbjct: 319 TESEKRDYAVKPMNCPGHVQVFNQGLRSYRDLPLRYAEFGACHRNEPSGALH-------- 370

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +       D        + +       N+  + +  +   D +  K+ L  +    + 
Sbjct: 371 GIMRVRGFVQDDAHIFCTEEQIIDEAKAFNELTMRVYRQFGFDNVSVKLSLRPE----KY 426

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              L A D+ +    + ++    E           G  +     D +     
Sbjct: 427 SGTLEAWDRAENGLREALRACGIEWEELPGEGAFYGPKIEYHIKDALGRSWQ 478



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+             Q L+  G R E+ L  ++    +++    +  P  I
Sbjct: 535 WLAPVQMVVMNITEAQADYAASVVQTLKKQGFRVELDL-RNEKISYKIREHSLQKLPYQI 593

Query: 434 IQGTGERSRGMLQIK 448
           I G  E++ G++ ++
Sbjct: 594 IVGDKEKADGLIAVR 608


>gi|22298319|ref|NP_681566.1| prolyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|81844949|sp|Q8DKT0|SYP_THEEB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|22294498|dbj|BAC08328.1| proline-tRNA ligase [Thermosynechococcus elongatus BP-1]
          Length = 602

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 40/110 (36%), Gaps = 2/110 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I     +++     D+  +       + L+ AGI   +     +  G + K AD  
Sbjct: 495 WPLAIAPYQVIIVVPNIGDAQQMQAATDLYEQLQAAGIEVLLDDRDERA-GVKFKDADLI 553

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
             P  ++ G    + G +++   A G + +  +     + +  +AQ   P
Sbjct: 554 GIPYRLVTG-RAIANGEVELIIRATGAKSTLPLTEVVRYLQKEIAQQLAP 602



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 4/79 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +  G         R+  ++   +R      G      P L+ ++ L +     D   K 
Sbjct: 34  RIASGIYSYLPLMWRVLQKVSAIVREEMNRSGALECLLPQLQPAE-LWQESGRWDTYTKA 92

Query: 70  ---VFSLQDDDGQWISLRY 85
              +FSL D   + + L  
Sbjct: 93  EGIMFSLTDRAQRQLGLGP 111


>gi|300933077|ref|ZP_07148333.1| prolyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 592

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 53/159 (33%), Gaps = 7/159 (4%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG- 376
           E       G          ++     + VP  G        +VA+ + +           
Sbjct: 432 EIGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGIGVSRLVAVLAEQMHDEYGLRWPV 491

Query: 377 -----PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +   + D+ +    +  T  L + G+   +      + G + K ++    PL
Sbjct: 492 AVAPYDVHVVIANKDAAAAEAAEKLTTELSSTGLDVLIDDRPKVSPGVKFKDSELLGMPL 551

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ++ G    + G +++++   G +L    ++  S  + +
Sbjct: 552 VVVVG-RGFAEGKVELRNRLSGDKLEVAYEDAVSAVQQQ 589



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 43/112 (38%), Gaps = 12/112 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+  ++ + +RN  +  G   +  P L   E  ++ G++    D     +
Sbjct: 40  GVYSWLPLGLRVLRKVENVVRNEMDAIGAQELSFPALLPREPYETTGRWTEYGDA----L 95

Query: 71  FSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             L+D  G    L     ++   + +   E      FP   Y+I   +R+E+
Sbjct: 96  LRLKDRKGADYLLGPTHEEMFTSVVK--GEYNSYKDFPVTLYQIQNKYRDEE 145


>gi|319763197|ref|YP_004127134.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330825391|ref|YP_004388694.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317117758|gb|ADV00247.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329310763|gb|AEB85178.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 639

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 68/258 (26%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  ++ P +    SL +     D+  + +F +
Sbjct: 261 GTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKAPQI-LDKSLWEKTGHWDKYRENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKRDYALKPMNCPG-------HILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +          V            +    D + +          ++ 
Sbjct: 372 IMRVRGFTQDDGHIFCTEDQIQHEVLAFTRLLQRVYQDFGFTDIVYKVATRPDARIGSDE 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      DK +   ++ +K    +           G  +     D +         +   
Sbjct: 432 I-----WDKAEAALIESLKASGCDFEISPGEGAFYGPKIEYTLKDAIGRHWQCGTIQVDF 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 487 SMPERLDAEYVGEDGGRH 504


>gi|257784517|ref|YP_003179734.1| prolyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473024|gb|ACV51143.1| prolyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 565

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 5/115 (4%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++      ++   + D +              AG+   +     +  G +   AD 
Sbjct: 456 KWPVSVAPYEVSVLCLSNKDPEIWDAAGAVADACVAAGLETVVDDRVER-PGVKFADADL 514

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              P  +I G    + G+ ++K+ A G+     +    SW     A+  +P  EL
Sbjct: 515 IGFPWQVIVGKKGVTNGIAEVKERATGERFEVALDEVASWL----AEKILPEREL 565



 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         R   +I   IR+  +  G   I  P++  ++ L +     D  
Sbjct: 29  MIRKTAAGLYSYLPLAWRSLLKIEAIIRDEMDGIGAQEILVPIMTPAE-LWEESGRWDVY 87

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +  +L  
Sbjct: 88  GDELMRMHDRHDRQFALGP 106


>gi|242046134|ref|XP_002460938.1| hypothetical protein SORBIDRAFT_02g037830 [Sorghum bicolor]
 gi|241924315|gb|EER97459.1| hypothetical protein SORBIDRAFT_02g037830 [Sorghum bicolor]
          Length = 648

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR+ + DS + I+  +G+D + TP +  +D L K     D   + +++ 
Sbjct: 272 GLVFWHPKGAIIRHILEDSWKQIHLQHGYDLLYTPHVAKAD-LWKISGHIDFYKESMYNQ 330

Query: 74  QDDDGQWISLRYDLTA 89
            D + +   LR     
Sbjct: 331 MDVEDEMYQLRPMNCP 346



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 2/91 (2%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +    + L         L++ G+R E+  G        ++ A+ +  PL  + G  E  
Sbjct: 555 ILPVTDNELQYCNEVASELKSRGLRVEVCHGER--LPKLIRNAETQKVPLMAVVGPKEVQ 612

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVA 472
              L I+    G+  +  +    +  +  VA
Sbjct: 613 ARTLTIRSRHNGEIGTMPVDEFITRLQLAVA 643


>gi|222106783|ref|YP_002547574.1| histidyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254801972|sp|B9K1W0|HISZ_AGRVS RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|221737962|gb|ACM38858.1| histidyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 372

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           + + +   G   ++TP+++ ++       ++ R  + +F  + + G+ + LR + T P+ 
Sbjct: 13  LLDDFAARGAARVDTPVIQPAEPFLDMAGEDLR--RRIFLTESETGESLCLRPEFTIPVC 70

Query: 93  RYVAENFDTIVFPCRT 108
               EN          
Sbjct: 71  LSHIENATGTPKRYAY 86


>gi|156098721|ref|XP_001615376.1| threonyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148804250|gb|EDL45649.1| threonyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 912

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/477 (9%), Positives = 115/477 (24%), Gaps = 41/477 (8%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 +I N+++D +R  Y    +D + TP +   D L +           +F    + 
Sbjct: 462 WLPHGAKIYNKLIDFVRREYRIRLYDEVITPNVFSCD-LWRTSGHYQNYKDCMFIFNVEQ 520

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +W  ++                         ++   +R+       F    + ++    
Sbjct: 521 KEW-GMKPMNCPG-------------HCVMFKQLNASYRSLPIRLADFGVLHRNEISGSL 566

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           S                     IK            I D    K  L    +  + +  +
Sbjct: 567 SGLTRVRRFQQDDSHIFCTFEQIKEEVLGTLHFIFFIYDLFGFKYELFLSTRPKKFIGNI 626

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D  ++     +       + +       G          +   L   + ++      
Sbjct: 627 STWDFAEQALKDALNSANIPWKLNEGDGAFYG--------PKIDILLKDSINRTHQCGTI 678

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            +   +               + + G            V         V     G     
Sbjct: 679 QLDFQLPCRFNLQYKNRDFGALAEGGDGEGAAAKREEEVGAEVAAGAEVAAGAAGAADAT 738

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           +        +         L+ R   + V      +G     VA+    ++      + P
Sbjct: 739 DAANGANGANTADAAPAAELLKRGFDRPVIIHRAILGSVERFVAILIEHTAGKLPFWISP 798

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
                +              Q L       E+    +     +++ A        ++ G 
Sbjct: 799 RQAIVLPVSDKFNDYAHYVHQTLNNHLFDVEIDTSLN-TLNKKIREAQLNQFNFILVVGE 857

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
            E +   + +++                 R+ +       + EL++   K+L+ N +
Sbjct: 858 KELTTNTVTVRN-----------------RDDQNNHEVCSLEELIARFGKLLEVNSK 897


>gi|323498007|ref|ZP_08103016.1| prolyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317052|gb|EGA70054.1| prolyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D +      D +     K  D        
Sbjct: 146 RFGVMRAREFCMMDAYSFDIDKDGLQKSYDAMHDAYCKAFDRMGLEYRP 194



 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSEEVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G  + K+   G++ +  + +     +A+
Sbjct: 540 KEGNFEYKNRRSGEKTAVAMTDIVEHVKAQ 569


>gi|262052254|ref|ZP_06024459.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus 930918-3]
 gi|259159855|gb|EEW44894.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus 930918-3]
          Length = 645

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R  +    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVQIIPVNVD-LHYDYARQLQDELKSQGVRVSID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     DR  + +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDRYQEDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
              D  + + LR           A    +    P R   +G + R E           R 
Sbjct: 321 MQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRG 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +     +  M+ D  +  G +   + +   + +  +   +   + 
Sbjct: 381 MTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 NKAENM 446


>gi|90419959|ref|ZP_01227868.1| putative histidyl-tRNA synthetase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336000|gb|EAS49748.1| putative histidyl-tRNA synthetase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 381

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 57/155 (36%), Gaps = 6/155 (3%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARY 94
            ++   G   ++ P+++ +D       +  R  + +F  + + G+ + LR D T P+ R 
Sbjct: 19  ALFAARGAARVDVPIIQPADPYLDTAGEALR--RRIFLTRGEAGETLCLRPDFTIPVCRD 76

Query: 95  VAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADT 154
              +  T+        +    R    G            +N  ++   A A+    +   
Sbjct: 77  HVGHGATLPRRYSYVGLVFRQRPTGPGEFYQAGIEDLGEENAATADARALADALAGLEAC 136

Query: 155 LEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
               G++  +  + + ++ + +  L  +GL    +
Sbjct: 137 ----GLEAGELDLVLGDQGLFEAFLRALGLPEGWQ 167


>gi|329943296|ref|ZP_08292070.1| threonyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328814843|gb|EGF84833.1| threonyl-tRNA synthetase [Chlamydophila psittaci Cal10]
          Length = 379

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/142 (8%), Positives = 39/142 (27%), Gaps = 2/142 (1%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
                 + + I + ++   + +++  G+  I+TP L    SL +         + +++L+
Sbjct: 1   MPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLMNR-SLWEVSGHWSNYRENMYTLK 59

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
             D +  +++         Y      +                 +               
Sbjct: 60  I-DDEDYAIKPMNCPGCMLYYKTRLHSYKQFPLRIAEIGHVHRYEVSGALSGLMRVRAFH 118

Query: 135 NVGSSAETADAEMCMMMADTLE 156
              +       ++     + L 
Sbjct: 119 QDDAHVFLTPEQVEEETLNILH 140



 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 22/234 (9%), Positives = 61/234 (26%), Gaps = 6/234 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     +  E ++I+     +     +    EL         G +EL  ++ 
Sbjct: 117 FHQDDAHVFLTPEQVEEETLNILHLVSELYSTFGLEYHLELSTRPEKATIGSDELWELAT 176

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRY 334
              +    ++          G  Y                +       +           
Sbjct: 177 AALERALINSNTPFIINPGDGAFYGPKIDIHVKDAIQRTWQCGTIQLDMFLPERFELEYT 236

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +    +     +    F      L + ++  +           + + T+        + Q
Sbjct: 237 NAQGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHIRLITVA--DRHQPRAQ 294

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                 +  G+   +   S+++   +++ A        +  G  E  +  L I+
Sbjct: 295 KLATAWQKLGLIVTVD-DSNESVSKKIRNAQNMQVNYMVTLGDREIEQNTLAIR 347


>gi|255030222|ref|ZP_05302173.1| prolyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 505

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 79/256 (30%), Gaps = 6/256 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   D  K A    + I  +V FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKDLEKVATPDQKSITDIVGFLE 271

Query: 246 IDLEKSMHELYELVKG 261
           + +EK+M  +   V  
Sbjct: 272 VPIEKTMKSMLYQVDD 287


>gi|126650283|ref|ZP_01722511.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126592933|gb|EAZ86915.1| threonyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 637

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/479 (11%), Positives = 125/479 (26%), Gaps = 110/479 (22%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +RN +   +RN+   Y +  + TPL+     L +     D     ++  
Sbjct: 263 GMPFYLANGQILRNELESYLRNLQAKYDYREVRTPLMMN-QRLWEQSGHWDHYKDNMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q  +L+             +         +YR  P+   E     R       + 
Sbjct: 321 TQVDDQSFALKPMNCPG-------HMLIFKNSLHSYRDLPIRMAEFGQVHRHEFSGALNG 373

Query: 134 DNVGSSAETADAEMCM--MMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                S    DA +       +   A+ +K  D    +   +          +    + +
Sbjct: 374 LLRVRSFCQDDAHIFATPQQIENEIALALKIIDEVYNVFGFQ--------YSVELSTRPD 425

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           + +  L   D+ ++     +  L  +   +       G  +     D +           
Sbjct: 426 DYMGELSLWDQAEEALENVLTNLGIDYTINEGDGAFYGPKIDIHIKDAI----------- 474

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                         ++      V  +      ++   I   +  VR +  +   V+ +I 
Sbjct: 475 --------------QRSHQCATVQLDFQLPEKFDLTYINEHNEKVRPVVIH-RAVFGSID 519

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
            F  +  +     F       +   +      Q+           +++ AL+  +     
Sbjct: 520 RFLGILIEHFGGAFPIWLAPQQVQVIAVADAHQD--------YAKQVVKALQHEQIRVQL 571

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                                     + +R A                QL        P 
Sbjct: 572 DDRQE------------------KLGKKIREA----------------QL-----HKIPY 592

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
            ++ G  E +   + ++    G++ + E                  IS+L+  + + ++
Sbjct: 593 ILVIGDRETAHQNVSVR--RHGQQATVEY----------------SISQLIEEMTEAIK 633


>gi|258592606|emb|CBE68915.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [NC10
           bacterium 'Dutch sediment']
          Length = 680

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +          Q  ++ LR AGIR E  +  ++  G +++ A+ +  P  +
Sbjct: 565 WLAPVQARLVPVADRFQPYAQQVSEQLRAAGIRTETDV-RNEKVGYKIRDAEMQKTPYIL 623

Query: 434 IQGTGERSRGMLQIK 448
           + G  E + G + ++
Sbjct: 624 VVGEKEATSGAVSVR 638



 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   +R  I D  R  +   G+D + TP +  + +L +     D   + ++
Sbjct: 290 GLVLWHPKGALVRKLIEDLWREQHLKNGYDLVYTPHVGRA-TLWETSGHLDFYQEFMY 346


>gi|282906079|ref|ZP_06313934.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282331371|gb|EFB60885.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
          Length = 645

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R  +    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVQIIPVNVD-LHYDYARQLQDELKSQGVRVSID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     D   + +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDHYQEDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
              D  + + LR           A    +    P R   +G + R E           R 
Sbjct: 321 MQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRG 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +     +  M+ D  +  G +   + +   + +  +   +   + 
Sbjct: 381 MTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 NKAENM 446


>gi|269960577|ref|ZP_06174949.1| prolyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834654|gb|EEZ88741.1| prolyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSEEVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +     +A++ 
Sbjct: 540 KEGNFEYKNRRSGEKTAVAMADIVEHVKAQLQ 571


>gi|260771311|ref|ZP_05880237.1| prolyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260613627|gb|EEX38820.1| prolyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 541

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +  G      P+++  + L +     ++ 
Sbjct: 1   MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDRAGAIETLMPVVQPFE-LWEETGRSEKM 59

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 60  GPELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 115

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D +      D + A   K  D        
Sbjct: 116 RFGVMRAREFSMMDAYSFDLDKQGLQKSYDAMHAAYCKAFDRMGLDYRP 164



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI         +  G      +    P  I+ G    
Sbjct: 451 MNMHKSERVQQAAEKLYAELSAAGIDVLFDDRKER-PGVMFSDMELIGVPHTIVIGDRSM 509

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  I       +A++A
Sbjct: 510 DEGNFEYKNRRNGEKTAIAIDQIVEHIKAQLA 541


>gi|313126275|ref|YP_004036545.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum
           borinquense DSM 11551]
 gi|312292640|gb|ADQ67100.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum
           borinquense DSM 11551]
          Length = 641

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 40/146 (27%), Gaps = 5/146 (3%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    +       +V ++              V I  +    D L       
Sbjct: 501 NEEHRPVMIHRALYGSYERFFMVLIEHFNGKFPFWLAPEQVRILPIS--DDQLGYAHRVK 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L    +  E     S   G +++     N P  +I G  E   G + ++D  + +E  
Sbjct: 559 NELGDFRVSVE---DRSWTLGRKIREGQEDNVPYMLIVGENEEESGTISVRDRQEREEQD 615

Query: 458 REIKNNESWREARVAQITIPISELVS 483
             I       EA   +  +    L  
Sbjct: 616 VSIDAFREHLEAEYDEKRLEPDFLAD 641



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 38/121 (31%), Gaps = 7/121 (5%)

Query: 9   AELPR----GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED 64
             +P     G         RI + + +   ++  +  ++P+ETP L  ++ L K     D
Sbjct: 253 FSIPEVTGPGLPLYHPNGKRILSELSEFAESLNLDADYEPVETPHLFRTE-LWKKSGHYD 311

Query: 65  RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
                +F L D + +   L+       A    +N  +                 K   G 
Sbjct: 312 NYVDDMF-LLDVNDEEYGLKPMNCPGHATIFDQNSWSY-RDLPVRYFEDGKVYRKEQRGE 369

Query: 125 F 125
            
Sbjct: 370 L 370


>gi|283470950|emb|CAQ50161.1| threonyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 645

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R  +    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVQIIPVNID-LHYDYARQLQDELKSQGVRVSID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     D   + +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDHYQEDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
              D  + + LR           A    +    P R   +G + R E           R 
Sbjct: 321 MQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRG 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +     +  M+ D  +  G +   + +   + +  +   +   + 
Sbjct: 381 MTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 NKAENM 446


>gi|315180910|gb|ADT87824.1| prolyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 546

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +  G      P+++  + L +     ++ 
Sbjct: 6   MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDRAGAIETLMPVVQPFE-LWEETGRSEKM 64

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 65  GPELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 120

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D +      D + A   K  D        
Sbjct: 121 RFGVMRAREFSMMDAYSFDLDKQGLQKSYDAMHAAYCKAFDRMGLDYRP 169



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  I+ G    
Sbjct: 456 MNMHKSERVQQAAEKLYAELSAAGIDV-LFDDRKERPGVMFSDMELIGVPHTIVIGDRSM 514

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  I       +A++A
Sbjct: 515 DEGNFEYKNRRNGEKTAIAIDQIVEHIKAQLA 546


>gi|294339022|emb|CAZ87369.1| proline tRNA synthetase [Thiomonas sp. 3As]
          Length = 576

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 42/154 (27%), Gaps = 8/154 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   ++   +R      G   +  P+++ ++ L +     D+    +  +
Sbjct: 38  GLYSYLPLGLRSIRKVEAIVREEMNRAGAIELLMPVVQPAE-LWQETGRLDQFGPELLRI 96

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +D   +   ++        DL     R   +           +R     R        F 
Sbjct: 97  KDRHDRDFVIQPTSEEVVTDLVRSEVRSWRQLPLNFYHIQTKFRDERRPRFGVMRAREFT 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
                  D    +A+ +   M        +  G 
Sbjct: 157 MKDAYSFDRDFEAAQISYRVMFDAYVRIFQRFGF 190


>gi|296135005|ref|YP_003642247.1| prolyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795127|gb|ADG29917.1| prolyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 576

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 42/154 (27%), Gaps = 8/154 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   ++   +R      G   +  P+++ ++ L +     D+    +  +
Sbjct: 38  GLYSYLPLGLRSIRKVEAIVREEMNRAGAIELLMPVVQPAE-LWQETGRLDQFGPELLRI 96

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +D   +   ++        DL     R   +           +R     R        F 
Sbjct: 97  KDRHDRDFVIQPTSEEVVTDLVRSEVRSWRQLPLNFYHIQTKFRDERRPRFGVMRAREFT 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
                  D    +A+ +   M        +  G 
Sbjct: 157 MKDAYSFDRDFEAAQISYRVMFDAYVRIFQRFGF 190


>gi|116199131|ref|XP_001225377.1| hypothetical protein CHGG_07721 [Chaetomium globosum CBS 148.51]
 gi|88179000|gb|EAQ86468.1| hypothetical protein CHGG_07721 [Chaetomium globosum CBS 148.51]
          Length = 1554

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 57/369 (15%), Positives = 119/369 (32%), Gaps = 44/369 (11%)

Query: 7    LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            + + +P         ++  R  + +++ +I+  +G     T  L          P     
Sbjct: 997  MSSSIPS------PADLMRRYIVKETLISIFRRHGAVEAPTSTL---------YPRSSHY 1041

Query: 67   NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
             +    L D +G  + L +DL    AR +A    T                ++H  G+  
Sbjct: 1042 GQNAVHLLDKNGTVLQLPFDLVMGHARSLA--RITNGTVPMRSYSFGNIFRDRHDGGQPD 1099

Query: 127  QFIQCDVDNVGSSAET---ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
             + + D D V + A      +AE+  ++ + + A     +           L  ++ +  
Sbjct: 1100 VYGEVDFDIVTTDALDLALKEAEVIKVLDEIVTAFPTTSSTPVCFQLGHSDLLHLIFEFC 1159

Query: 184  LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                   +    VL  +  +  F    V+  L           +    +++  +D + SF
Sbjct: 1160 GVEPGARHAAAEVLSKL-NIRNFTWPKVRSELR----------SPLVGMSATSVDELQSF 1208

Query: 244  LSID-LEKSMHELYELVKGTIAGEKGF---NELVVISELVRKSGYNSNRIKISSTIVRGL 299
               D   K++ +L  L  GT   EK       L  + +  +K G +        + +   
Sbjct: 1209 DFRDTPSKAISKLRVLFDGTEYSEKVSSTLAHLREVYDYTKKFGLSGKVYIAPLSSINET 1268

Query: 300  EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
             +  G ++  +    V +             GGRYDGL+   + +          +   +
Sbjct: 1269 FFRGGILFACLYDKKVKD---------VFAAGGRYDGLIKEHRPKIGSRFEERHAVGFSL 1319

Query: 360  VALKSLESS 368
               K L   
Sbjct: 1320 NWEKQLAKQ 1328


>gi|315084265|gb|EFT56241.1| threonyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
          Length = 689

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQVNGVVLDGA 662


>gi|328754594|gb|EGF68210.1| threonyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 689

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQVNGVVLDEA 662


>gi|327331893|gb|EGE73630.1| threonine--tRNA ligase [Propionibacterium acnes HL096PA3]
          Length = 689

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQVNGVVLDEA 662


>gi|315098581|gb|EFT70557.1| threonyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
          Length = 689

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQVNGVVLDEA 662


>gi|315080595|gb|EFT52571.1| threonyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
          Length = 689

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQVNGVVLDEA 662


>gi|314967879|gb|EFT11978.1| threonyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
          Length = 689

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQVNGVVLDEA 662


>gi|313764410|gb|EFS35774.1| threonyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313772208|gb|EFS38174.1| threonyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313807564|gb|EFS46051.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313810073|gb|EFS47794.1| threonyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313815947|gb|EFS53661.1| threonyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313818605|gb|EFS56319.1| threonyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313820374|gb|EFS58088.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313822822|gb|EFS60536.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313825247|gb|EFS62961.1| threonyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313827535|gb|EFS65249.1| threonyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313830403|gb|EFS68117.1| threonyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313833773|gb|EFS71487.1| threonyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314915402|gb|EFS79233.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918317|gb|EFS82148.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920127|gb|EFS83958.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314925261|gb|EFS89092.1| threonyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314931649|gb|EFS95480.1| threonyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314955705|gb|EFT00107.1| threonyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314958104|gb|EFT02207.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314959956|gb|EFT04058.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314973405|gb|EFT17501.1| threonyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976084|gb|EFT20179.1| threonyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978527|gb|EFT22621.1| threonyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314983896|gb|EFT27988.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314988078|gb|EFT32169.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314989885|gb|EFT33976.1| threonyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315085609|gb|EFT57585.1| threonyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088339|gb|EFT60315.1| threonyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315095950|gb|EFT67926.1| threonyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315101418|gb|EFT73394.1| threonyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315105605|gb|EFT77581.1| threonyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315108634|gb|EFT80610.1| threonyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327326232|gb|EGE68022.1| threonine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327443095|gb|EGE89749.1| threonyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327445877|gb|EGE92531.1| threonyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327448141|gb|EGE94795.1| threonyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327450737|gb|EGE97391.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327453921|gb|EGF00576.1| threonyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328753425|gb|EGF67041.1| threonyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328754156|gb|EGF67772.1| threonyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328760808|gb|EGF74374.1| threonine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 689

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQVNGVVLDEA 662


>gi|256827500|ref|YP_003151459.1| prolyl-tRNA synthetase, family II [Cryptobacterium curtum DSM
           15641]
 gi|256583643|gb|ACU94777.1| prolyl-tRNA synthetase, family II [Cryptobacterium curtum DSM
           15641]
          Length = 588

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 6/130 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R   +  G   I  P+++ ++ L       +     +  +
Sbjct: 42  GAYTYLPLGWRVIRKIERIVREEMDAIGSQEIMMPVIQPAE-LWHESGRWNDYGPELMRM 100

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D  G  + L     +L   L R    ++  +      Y+I   FR+E        +  +
Sbjct: 101 DDRHGHGLCLGPTHEELITALVRNELRSYKQLP--VILYQIQSKFRDEIRPRFGLMRSRE 158

Query: 131 CDVDNVGSSA 140
             + +  S  
Sbjct: 159 FIMKDAYSFH 168



 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 2/87 (2%)

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G+   +     +  G +   AD    PL II G      G  ++K+ + G + +  I   
Sbjct: 499 GLEVVIDDRKER-PGVKFAEADLLGWPLQIIIGKRGLDAGEYELKNRSTGAKRTIAIDEF 557

Query: 464 ESWREARVAQITIPISELVSTVKKILQ 490
            +      +   +  +  +  + + + 
Sbjct: 558 NAALAMVKSMPDVARA-AIEQILERIA 583


>gi|209694468|ref|YP_002262396.1| prolyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226731423|sp|B6EHZ8|SYP_ALISL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|208008419|emb|CAQ78577.1| prolyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 44/130 (33%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++ + +R   +N G      P+++  + L +     +  
Sbjct: 31  MIRRLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEEM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHARPFVLSPTAEEVITSLVRNEVNSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +     L   GI   +F    +  G  
Sbjct: 461 DEYGIVWPEALAPFTVAIVPMNMYKSDRVKEAAEKLYAELTAMGIDV-LFDDRKERPGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            K  +    P  ++ G      G  + K+     +   EI N     +A+++
Sbjct: 520 FKDIELIGIPHTVVIGDRSMDEGNFEYKNRRANSKEVIEIANIVEHIKAQLS 571


>gi|50842554|ref|YP_055781.1| threonyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289426579|ref|ZP_06428319.1| threonine--tRNA ligase [Propionibacterium acnes J165]
 gi|295130636|ref|YP_003581299.1| threonine--tRNA ligase [Propionibacterium acnes SK137]
 gi|73919815|sp|Q6A8U3|SYT_PROAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|50840156|gb|AAT82823.1| threonyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289160223|gb|EFD08387.1| threonine--tRNA ligase [Propionibacterium acnes J165]
 gi|291376551|gb|ADE00406.1| threonine--tRNA ligase [Propionibacterium acnes SK137]
 gi|332675479|gb|AEE72295.1| threonine--tRNA ligase [Propionibacterium acnes 266]
          Length = 684

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 409 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKKEKFIGSDEDWQ 468

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 469 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 528

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 529 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 587

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 588 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 645

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 646 GSQVNGVVLDEA 657


>gi|329115645|ref|ZP_08244367.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326695073|gb|EGE46792.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 645

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/339 (11%), Positives = 91/339 (26%), Gaps = 13/339 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
             +S         M +A   +              + +I    L         ++ E   
Sbjct: 306 WEASGHWDKYRHHMFIATVEDENKTLALKPMNCPCHVQIFRHGLRSY-RELPLRMAEFGA 364

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
             R        GL  V+        D++  F     +  E +  +     +  +     +
Sbjct: 365 CHRYEPSGALHGLMRVRG----FTQDDAHIFCTEDQIADETVRFVKMLHDVYQDLGFEHV 420

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
                       G +E+   +E   K       ++       G  Y      E +L   +
Sbjct: 421 RVKFADRPEQRAGSDEVWDKAENALKEACTVAGVEYEHNPGEGAFYG--PKLEFVLRDAI 478

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNN 371
             + Q   +   +    R D                         R +  L    +    
Sbjct: 479 GRDWQCGTLQVDLVLPERLDASYIGEDSGRHRPVMLHRAILGSFERFLGILIEQHAGRFP 538

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + PV +      SD+    +     LR AG+  E  + + K    +++       P+
Sbjct: 539 LW-LAPVQVVVASIVSDAAPYAEEVAAALREAGLAVEADVRNDK-INAKVREHSVARVPV 596

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ++ G  E     + ++ L    + +  + +  +  +  
Sbjct: 597 ILVVGRREAEERTVAMRRLGTQAQETLSLNDAVARLKNE 635



 Score = 40.2 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF--SLQD 75
              K  R+   + D +R     +G+  + TP L    +L +     D+    +F  +++D
Sbjct: 268 WHAKGWRLYTALQDYMRRAQTRHGYQEVRTPQLVDR-ALWEASGHWDKYRHHMFIATVED 326

Query: 76  DDGQWISLRYDLTA 89
           ++ + ++L+     
Sbjct: 327 EN-KTLALKPMNCP 339


>gi|322389968|ref|ZP_08063508.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321143404|gb|EFX38842.1| threonine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 647

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/382 (11%), Positives = 102/382 (26%), Gaps = 22/382 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +    +     P+   E +         + D+       +  +  +  M  
Sbjct: 279 RYIVDK--EVAAGYQHVYTPPIASVELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIE 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +       D  +  NLT  +    +S+   + +    +  E+ +      K   + 
Sbjct: 397 EEF-KKILQLIIDVYEDFNLTDYRF--RLSYRDPEDKHKYFDNDEMWENAQRMLKAAVD- 452

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +  E     G  +         V+        +    L F +                 
Sbjct: 453 DMGVEYYEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R    L                +      +   +  
Sbjct: 502 HYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK-YADR-RNCPLAIIQGTGERSRGMLQIKDL 450
                + LR  G+RA++     +N   Q K  A + +  P  +I G  E     + ++  
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFKIRASQTQKIPYQLIVGDKEMEDKAVNVRRY 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            + +  +  +          +A
Sbjct: 619 GQKETETMSVDAFVELILTDIA 640



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 65/259 (25%), Gaps = 10/259 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP +   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIASVELY-KTSGHWDHYREDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+   LR             + +       +YR  P+   E     R+ +     
Sbjct: 321 MDMGDGEEFVLRPMNCP-------HHIEVYKHHVHSYRELPIRIAEIGMMHRYEKSGALT 373

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                    + +     +  + +E    K     I +     L     ++     +  ++
Sbjct: 374 -GLQRVREMSLNDGHTFVAPEQIEEEFKKILQLIIDVYEDFNLTDYRFRLSYRDPEDKHK 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   +   +     V  +  E           G  L  +    +    ++   +  
Sbjct: 433 YFDNDEMWENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLDIQVKTALGKEETLSTIQLD 492

Query: 253 HELYELVKGTIAGEKGFNE 271
             L E       G  G   
Sbjct: 493 FLLPERFDLHYIGADGEEH 511


>gi|156975521|ref|YP_001446428.1| prolyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166980171|sp|A7N1W0|SYP_VIBHB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|156527115|gb|ABU72201.1| hypothetical protein VIBHAR_03253 [Vibrio harveyi ATCC BAA-1116]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSEEVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +     +A++ 
Sbjct: 540 KEGNFEYKNRRSGEKTAVAMADIVEHVKAQLQ 571


>gi|90423927|ref|YP_532297.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|114152242|sp|Q215F8|SYP_RHOPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|90105941|gb|ABD87978.1| prolyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 439

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 30/102 (29%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  +I   +R      G      P L+ +D L +     D     +  +
Sbjct: 38  GIYAWLPLGLRVLKKIEQIVREEQNRAGAIECLMPTLQLAD-LWRESGRYDAYGPEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            D   + +       ++   + R    ++  +       +  
Sbjct: 97  TDRHKRELLYGPTNEEMITEIFRAYVRSYKNLPLNLYHIQWK 138


>gi|219850181|ref|YP_002464614.1| YbaK/prolyl-tRNA synthetase associated region [Chloroflexus
           aggregans DSM 9485]
 gi|219544440|gb|ACL26178.1| YbaK/prolyl-tRNA synthetase associated region [Chloroflexus
           aggregans DSM 9485]
          Length = 531

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 27/96 (28%), Gaps = 2/96 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          + + T+      ++        LR AG    +     +  G +  
Sbjct: 417 DERGIVWPAAIAPVDIHLVTIGRGEAVVTAAHTLATELRNAGWSVLIDDRDERA-GVKFN 475

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            AD    P  ++      + G ++++      + + 
Sbjct: 476 DADLIGAPWRLVVSEKLLAAGQVEVR-RRTEVQATV 510


>gi|213403436|ref|XP_002172490.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212000537|gb|EEB06197.1| threonyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 699

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/375 (12%), Positives = 108/375 (28%), Gaps = 31/375 (8%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           N+ +      +      A+ + +  I+++ + +   N      I +       D      
Sbjct: 340 NMYNVDLWKTSGHWNNYAENMFSFEIEKDKFALKPMNCPGHCLIYKSRDRSYRDLPWRCA 399

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS--------- 245
                        L G+   +   + D++  F +   + SE I+    FL          
Sbjct: 400 DFGVLHRNEFSGALTGLTR-VRRFQQDDAHIFCRPDQVRSE-IENCFDFLKYVYGVFGFT 457

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISE----LVRKSGYNSNRIKISSTIVRGLEY 301
             LE S     + +       K   +L    +        +  +         I      
Sbjct: 458 FHLELSTRPEEKYLGDLETWNKAEAQLKAALDASGYEWELNEGDGAFYGPKIDITVFDAL 517

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                   I     + E+ +    G+  G    D        + V      +G    ++A
Sbjct: 518 KRQHQCATIQLDFQLPERFELEFHGTTEGDEAADSTNKNKYIRPVMIHRAILGSVERMIA 577

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           + +          + P  ++ +   + +        + L  AG+ A++   S      ++
Sbjct: 578 ILTEHYGGKWPFWLSPRQVSVVPVSAAAFDYANKVQKRLFDAGLFADVD-TSDNTLPKKI 636

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           + A         + G  E     + I++                  + +    T+P+ E+
Sbjct: 637 RNAQLSQYNFIFVVGAEEEKTNSVNIRNRDD--------------PKKQAKTATVPLDEV 682

Query: 482 VSTVKKILQENKEEI 496
           V+ +   L+E K  +
Sbjct: 683 VAKLVA-LKETKNPV 696



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++  IR  Y+  GF  + TP +   D L K     +   + +FS + + 
Sbjct: 309 FLPHGARIYNQLIAWIREQYKIRGFQEVITPNMYNVD-LWKTSGHWNNYAENMFSFEIEK 367

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 368 DK-FALKPMNCPG 379


>gi|261408878|ref|YP_003245119.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261285341|gb|ACX67312.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 645

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +   +      +   + L+ AGI  E  L  ++  G +++ A     P   
Sbjct: 544 WLSPVQVKVIPVSNAFEDYAKEVAEKLQFAGISVEPDL-RNEKLGYKIREAQLEKIPYMF 602

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           I G  E++ G + ++   +G   ++ +          +    +
Sbjct: 603 IVGENEKNAGAVSVRKRGEGDIGAQPLDEIILKLREEINTHVV 645



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/220 (11%), Positives = 58/220 (26%), Gaps = 9/220 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++R  +   I ++ E  G+  + TP+L   +   K     +   + +F  
Sbjct: 265 GLPIWLPNGAKLRRTLERYIVDMEERLGYQHVYTPVLGNVELY-KTSGHWEHYQEDMFPK 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEELVLRPMNCP-------HHMMVYKSDMHSYRDLPIRIAELGMQHRYEMSGALT- 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                 A T +        D ++    +     + +     +     ++         + 
Sbjct: 376 GLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKDFGIHDYRFRLSYRDPQDTEKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                  +   +   + V+ L              G  L 
Sbjct: 436 FQNDEMWEMSQRMLREVVESLDMPFYEAEGEAAFYGPKLD 475


>gi|229523326|ref|ZP_04412733.1| prolyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229339689|gb|EEO04704.1| prolyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +   + +A++A
Sbjct: 540 DEGHFEYKNRRSGEKEAVAMASIIDFIQAKLA 571


>gi|168012416|ref|XP_001758898.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690035|gb|EDQ76404.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 613

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 2/90 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +   +     LR  GIRAE+  G     G  ++ A+ +  P+  
Sbjct: 512 WLAPVQARLLPVTDHEVDYCKNVVAKLREKGIRAEVVFGER--LGKLIRNAETQKIPVMA 569

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           + G  E     L ++    G+  +  + + 
Sbjct: 570 VVGPKEVESATLTVRTRHGGELGTLSLDDL 599



 Score = 43.3 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ I D  + ++   G++ + TP +   D L K     +   + +F  
Sbjct: 237 GLVFWHPKGSMVRHIIEDYWKKMHFANGYELLYTPHIAKLD-LWKTSGHYEFYKENMFDQ 295

Query: 74  QDDDGQWISLRYDLTA 89
              + +   +R     
Sbjct: 296 MRIEEELYQIRPMNCP 311


>gi|153824641|ref|ZP_01977308.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149741859|gb|EDM55888.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQQAAEQLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +   +  A++A
Sbjct: 540 DEGHFEYKNRRSGEKEAVAMASIIDFIHAKLA 571


>gi|94264275|ref|ZP_01288069.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
 gi|94270245|ref|ZP_01291687.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
 gi|93450880|gb|EAT01895.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
 gi|93455320|gb|EAT05527.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1]
          Length = 641

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 1/100 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    ++     L       + LR AG+R E     ++    +++ A  +  P  +
Sbjct: 539 WLAPVQARILNITDAQLDYVGKVYEQLRRAGVRVEKD-ERNEKLNYKIREAQLQKIPYML 597

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           + G  E + G + ++        +  + +  +    +VA+
Sbjct: 598 VVGDQEAADGTITVRQRDGKNLPAMTVADFAALVAGQVAE 637



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   +R  I D  R  +  +G+D + TP +   + L +     D     +F+  D +
Sbjct: 268 WQPKGALLRRLIEDYWRQQHYQHGYDLLYTPHIARRE-LWQTSGHLDFYGDNMFAGMDIE 326

Query: 78  GQWISLRYDLTA 89
                L+     
Sbjct: 327 DVQYQLKPMNCP 338


>gi|332284530|ref|YP_004416441.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330428483|gb|AEC19817.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 648

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/153 (10%), Positives = 42/153 (27%), Gaps = 4/153 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   +  ++   +R++Y + G+  ++ P +   D  L K     D   + +F+
Sbjct: 266 GLIFWHPKGWTLWQQVEQYMRSVYRDNGYQEVKAPQI--LDLSLWKKTGHWDNYAENMFT 323

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + + +   L+        +       +       Y         +             
Sbjct: 324 -TESENRVYGLKPMNCPGHVQIFNAGLHSYRELPIRYGEFGQCHRNEPSGSLHGMMRVRG 382

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                      + ++    AD    +     D+
Sbjct: 383 FTQDDGHIFCTEDQLQDECADFTALLQKVYADF 415



 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 61/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F     L  E  D       +  +    E+   V        G +E+   +E   
Sbjct: 386 DDGHIFCTEDQLQDECADFTALLQKVYADFGFTEILYKVATRPEKRIGSDEVWDKAEQAL 445

Query: 281 KSGYNSNRIKISSTIVRGLEYY---TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
               +    +   +   G  Y       + +AI         Q         G    D  
Sbjct: 446 MESLSRTGCEYEVSPGEGAFYGPKIEYTLKDAIGRHWQCGTIQVDFSMPQRLGAEYVDAT 505

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             R     +           + + +++   +          ++  +     S        
Sbjct: 506 DQRRTPVMLHRAILGSFERFIGMLIENHAGAMPVWLAPEHAVVCCIS--ESSADYAAEVA 563

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             L+  G RA       +    +++    +  P  ++ G  ER  G + ++
Sbjct: 564 LGLKKQGFRA-FSDLRGEKITRKIREHSMQKIPYILVVGEKERESGQVAVR 613


>gi|302558076|ref|ZP_07310418.1| prolyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302475694|gb|EFL38787.1| prolyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 566

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 51/141 (36%), Gaps = 5/141 (3%)

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITT 382
                  + D L    K   V    + IG+SR + AL      +       E+ P  +  
Sbjct: 420 RKYADALKLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLCWPAEVAPADVHV 479

Query: 383 MDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +       ++     ++ L  AG+R  +      + G +   ++    P  ++ G    +
Sbjct: 480 VAAGKALQTELALEVSEKLSAAGLRVLVDDRPGVSPGVKFTDSELIGVPQILVAGRR-AA 538

Query: 442 RGMLQIKDLAKGKELSREIKN 462
            G++++KD   G+     I+ 
Sbjct: 539 EGVVELKDRRTGEREELTIEE 559



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++   +   +R   +  G   +  P L   +         D     +F LQD  
Sbjct: 48  WLPLGKKVLANVERIVREEMDAIGAQEVLLPALLPREPYEA-TGRWDEYGPELFRLQDRK 106

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 107 GGDYLLGP 114


>gi|254508639|ref|ZP_05120754.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548396|gb|EED25406.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSEEVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +     +A++A
Sbjct: 540 KEGNFEYKNRRSGEKTAVAMADIVEHVKAQLA 571


>gi|194861340|ref|XP_001969762.1| GG23767 [Drosophila erecta]
 gi|190661629|gb|EDV58821.1| GG23767 [Drosophila erecta]
          Length = 746

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 64/221 (28%), Gaps = 21/221 (9%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL   ++  +    + N   +      G   + G   +  +   +    Q   +      
Sbjct: 533 ELEQWNDAEKALAESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQLDFQL 592

Query: 331 GGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
             R++       G+           +G    ++A+ +   +      + P  +  +    
Sbjct: 593 PIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQVMVVPVGP 652

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                 Q     L  AG  +E    +      +++ A        ++ G  ERS   + +
Sbjct: 653 AYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNV 712

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           +                           + ++EL++ ++KI
Sbjct: 713 R------------------TRDNKVHGEVSVAELITKLQKI 735



 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++  I++ Y   GF  + +P + Y+  L           + +FS + + 
Sbjct: 370 FQPRGAHIYNTLMGFIKSEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYAENMFSFEAEK 428

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 429 -ETFALKPMNCPG 440


>gi|187921760|ref|YP_001890792.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187720198|gb|ACD21421.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 404

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 36/108 (33%), Gaps = 2/108 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R      GF  I TP L  + SL +     ++    ++SL
Sbjct: 24  GMVFWHPRGWELYRVLEVYVRARMRRAGFREIRTPQL-LARSLWEKSGHWEKFGAAMYSL 82

Query: 74  QD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D ++G+ + L+        +   +   +       Y        ++ 
Sbjct: 83  ADAEEGRALCLKPMSCPCHVQVFNQRVRSYRELPVRYSEFGACHRDEP 130


>gi|302829308|ref|XP_002946221.1| hypothetical protein VOLCADRAFT_102823 [Volvox carteri f.
           nagariensis]
 gi|300269036|gb|EFJ53216.1| hypothetical protein VOLCADRAFT_102823 [Volvox carteri f.
           nagariensis]
          Length = 691

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 36/99 (36%), Gaps = 1/99 (1%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
              +G    + A+ +   +      + P  +  +    +S        + LR AG+  ++
Sbjct: 544 RAVLGSVERMFAILTEHFAGKWPFWLNPRQVMVVPISENSSQYAFDVRRELRAAGLHVDV 603

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              S +    +++ A        ++ G  E++   + ++
Sbjct: 604 D-ASDRKMQKKVREAQLAQYNYILVVGEAEKAEQTVNVR 641



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++  IR  Y  Y ++ + TP +   D L +     D   + +F+ + + 
Sbjct: 316 FLPHGARIYNTLMSFIREKYWKYEYEEVITPNIYNFD-LWRTSGHADHYRENMFAFEIEK 374

Query: 78  GQWISLRYDLTAPLARYVAEN 98
            +   L+           A  
Sbjct: 375 AE-YGLKPMNCPGHCLMFANR 394


>gi|332307477|ref|YP_004435328.1| prolyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174806|gb|AEE24060.1| prolyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+ N++   +R   +  G   I  P+++ +D L +     D     
Sbjct: 34  KLASGLYTWLPTGLRVLNKVAQIVREEMDRAGSLEILMPVVQPAD-LWQESGRWDEYGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +  ++D   +   L  
Sbjct: 93  LLRVKDRHFRDFVLGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 29/104 (27%), Gaps = 3/104 (2%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                +      V I  M+       +   +     L+ AGI         +  G     
Sbjct: 466 GIIWPDAIAPFKVAIVPMNMHKSHRIQQVAEQMYAQLKAAGIEVLFDDRKER-PGVMFND 524

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            +    P  I+ G        ++ K+   G++   +I     + 
Sbjct: 525 MELVGVPHTIVIGERNLDEQKVEYKNRRSGEKQLIDIPQIADFI 568


>gi|78060370|ref|YP_366945.1| threonyl-tRNA synthetase, class IIA [Burkholderia sp. 383]
 gi|77964920|gb|ABB06301.1| Threonyl-tRNA synthetase, class IIa [Burkholderia sp. 383]
          Length = 477

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 4/107 (3%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             + + L+  E             I                 QML  AG+R  +    ++
Sbjct: 361 RFIAILLEHYEGWLPVWLAPEQ--IVVASISDAHAPYAMRVVQMLDDAGLRV-VADCRAE 417

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
               ++  A +   P  I  G  +   G + I++   G +++  +  
Sbjct: 418 RLERKIIDARKLQIPFLIAVGARDERNGTVSIRN-RNGDQVTLPLDE 463



 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   + D +R      GF  I TP L  + SL +     D+    +++L
Sbjct: 90  GMVFWHPRGWALYRVLEDYVRMRMRRAGFREIRTPQL-LARSLWERSGHWDKFGSQMYAL 148

Query: 74  QDDD 77
            D  
Sbjct: 149 PDRS 152


>gi|16803359|ref|NP_464844.1| prolyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501738|ref|ZP_03670045.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|81849855|sp|Q8Y7G2|SYP_LISMO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|16410735|emb|CAC99397.1| prolyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 568

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 79/256 (30%), Gaps = 6/256 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   D  K A    + I  +V FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKDLEKVATPDQKSITDIVGFLE 271

Query: 246 IDLEKSMHELYELVKG 261
           + +EK+M  +   V  
Sbjct: 272 VPIEKTMKSMLYQVDD 287



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDRAERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 557


>gi|281203096|gb|EFA77297.1| threonyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 716

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 40/116 (34%), Gaps = 1/116 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G     + + V      +G    ++A+    ++      + P  +            
Sbjct: 575 EYMGSGPEERHRPVIIHRAILGSVERMMAILIEHTAGKWPFWVSPRQVLVATVSEKFADY 634

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +  T+ L  AG  A++ L S K    +++ A        ++ G  E +   + ++
Sbjct: 635 AKSVTKTLTDAGFYADVDL-SDKTLPKKVREAQLSQYNYILVVGEEELNNNTVNVR 689



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 6/79 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI NR+++ IR+ Y   GF  + TP + +S  L +      +  + +F+L
Sbjct: 342 GCAFFLPHGTRIYNRLVEFIRHEYHRRGFTEVITPTM-FSQQLWEESGHWAKYGENMFNL 400

Query: 74  Q--DDDGQWISLRYDLTAP 90
           +  D +    SL+      
Sbjct: 401 KCDDQN---YSLKPMNCPS 416


>gi|261337772|ref|ZP_05965656.1| threonine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277225|gb|EFA23079.1| threonine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 681

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/386 (11%), Positives = 106/386 (27%), Gaps = 28/386 (7%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G  ++ +       ++    +     +       L+
Sbjct: 297 MHRRHHYSFVQTPHITKGKLYETSGHLQWYKDGMYPAMHLDEEKDAEGNIVKQGFDYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
            +    ++       R   +  L         +L E   V R        GL  V+ L  
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPL---------RLFEFGTVYRYEKSGVVHGLTRVRGLTQ 407

Query: 217 EGRTDNSGDFTK---GANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAGEKGFNE 271
           +                NL    + ++  +   D    +   + ++ V      E+  N 
Sbjct: 408 DDSHIYCTREQMKDELKNLLQFVLKLLKDYGLNDFYLELSTKDEHKFVGSDEIWEEATNT 467

Query: 272 LVVISEL--VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
           L  +++   +               I        G  ++        N  ++        
Sbjct: 468 LAEVAKDSGLELVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPER-------F 520

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
           G        +  +   +    F        + L+    +      + PV    +    + 
Sbjct: 521 GLEYIAKDGTHQRPVMIHRALFGSIERFFAILLEHYAGALPAW--IAPVQALGVPVADEF 578

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
               Q +   L    +R E+ L   + FG +++ A +   P  +I G  + S   +  + 
Sbjct: 579 APHLQRFMDSLEEDLVRVEIDLSDDR-FGKKIRNASKSKVPFILIVGEEDMSNNAVSFR- 636

Query: 450 LAKGKELS-REIKNNESWREARVAQI 474
              G +L+   + +   W    + + 
Sbjct: 637 FRDGSQLNGVPVDDARQWILKAINER 662


>gi|153216557|ref|ZP_01950520.1| prolyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153830554|ref|ZP_01983221.1| prolyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|124114232|gb|EAY33052.1| prolyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|148873952|gb|EDL72087.1| prolyl-tRNA synthetase [Vibrio cholerae 623-39]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +   + +A++A
Sbjct: 540 DEGHFEYKNRRSGEKEAVAMASIIDFIQAKLA 571


>gi|326336128|ref|ZP_08202300.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691637|gb|EGD33604.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 649

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 51/155 (32%), Gaps = 21/155 (13%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +         V I ++              
Sbjct: 508 NEMHRPVMIHRAPFGSMERFVAILLEHTAGNLPLWLVPEQVNILSVS--EKYEGYAYKVA 565

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            +L+ A +R  +    ++  G +++ A+ +  P  II G  E   G L ++         
Sbjct: 566 NLLQEADLRPHVD-NRNETIGKKIREAETQKYPYMIIVGEEEEKNGTLSVR--------- 615

Query: 458 REIKNNESWREARVAQITIPISELVSTVKKILQEN 492
                    +       T+ I++ ++ +++ + +N
Sbjct: 616 ---------KHGGADLGTMKIADFITLIQEEINKN 641


>gi|330930995|ref|XP_003303228.1| hypothetical protein PTT_15359 [Pyrenophora teres f. teres 0-1]
 gi|330938329|ref|XP_003305730.1| hypothetical protein PTT_18645 [Pyrenophora teres f. teres 0-1]
 gi|311317156|gb|EFQ86197.1| hypothetical protein PTT_18645 [Pyrenophora teres f. teres 0-1]
 gi|311320895|gb|EFQ88675.1| hypothetical protein PTT_15359 [Pyrenophora teres f. teres 0-1]
          Length = 529

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 62/497 (12%), Positives = 139/497 (27%), Gaps = 42/497 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +R++N++   I     + G   +    +  +++L +        N  +  
Sbjct: 38  SGVFHLLPLGLRVQNKLEGLIDKHMNSIGASKVSLSSI-TTEALWQQSGRYS-ANSELLR 95

Query: 73  LQDDDGQWISLRY----DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           ++D       L      ++TA +A  V    D  +   +  R     R  + G  R ++F
Sbjct: 96  IKDRRESGFLLSPTHEEEITALVASMVHSYKDLPLRLYQIGRKYRDERRPRGGLLRAKEF 155

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           +  D+    SS + A      +           +  Y +   +   + G L         
Sbjct: 156 VMKDLYTFDSSPKAALETYESVRQAYNNLFNELKLPYLVADADSGNMGGKLSHEYHFASP 215

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           K  + +   ++ D +     + +     +     + D      ++ ++   +   +    
Sbjct: 216 KGEDYVFSCQSCDYVAN---EELVEKKTDPAASKTSDSLMFTGISVDKKTAINIHIPKPS 272

Query: 249 E-----KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           E      S       V      +    ++ + + +   +  +      ++  V       
Sbjct: 273 ELGVDKVSWDGALAFVNLHAVKKALPKDVEIDTGIENLTLRSLLSKTTNTIDVYDAALLN 332

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGG-------------GGRY-----------DGLVS 339
                ++           P                     G RY           D  +S
Sbjct: 333 APSTCSVDITLTKPGDPCPRCSTGKLNIQKAIEVGHTFHLGTRYSVPLNAVIALPDQNLS 392

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD---HDSDSLSKYQMY 396
                     G S  I  +   L                 I   D    + D+   Y   
Sbjct: 393 SPTHMGCHGIGVSRIIGAVASLLSDARGLNWPRVIAPYEAIVLSDPKTEEKDTTEVYDAL 452

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
               R + I   +   + K+ G +LK AD    P+ ++ G        ++I+    G + 
Sbjct: 453 HGEGRNSDIDLVLDDRAGKSLGWKLKDADLIGYPVVVVMGRS-WKDKRVEIQCRRLGVKK 511

Query: 457 SREIKNNESWREARVAQ 473
             E+    +   A + Q
Sbjct: 512 DVELNELRTEVVALLEQ 528


>gi|226355500|ref|YP_002785240.1| threonyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|259516378|sp|C1D0W2|SYT_DEIDV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226317490|gb|ACO45486.1| putative threonine--tRNA ligase (threonyl-tRNA synthetase)
           [Deinococcus deserti VCD115]
          Length = 649

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 47/150 (31%), Gaps = 18/150 (12%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +   +    F      + + ++              V+I  +          +    
Sbjct: 513 QDHRPIMIHRAPFGSLERFVGILIEHYAGDFPLWLAPRQVMIIPIA--DRHNEYAEELRS 570

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L  AG+RAE+   S++    +++ A+    P+ +I G  E+    + ++          
Sbjct: 571 ELHAAGLRAEVDDSSNR-MQAKVRTAELSKIPVMLIVGDKEQEARQVSVR---------- 619

Query: 459 EIKNNESWREARVAQITIPISELVSTVKKI 488
                E   E    +  +   +L + + + 
Sbjct: 620 -----ERSVEGHKERKGVAFDDLCAELLER 644



 Score = 40.2 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 2/111 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G          +R  +   ++      G+  + TP +   +   K          G F+
Sbjct: 267 KGLPLWLPNGTVLREELAGFLKEQQFRRGYQGVITPNIGNLELY-KTSGHYPYYADGQFN 325

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGP 122
             + D +   L+        R  A    +    P R    G V+R E+ G 
Sbjct: 326 PIEVDDEQYMLKPMNCPHHVRIYASKPRSYRDLPVRLAEFGTVYRYEQSGE 376


>gi|297581262|ref|ZP_06943186.1| prolyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297534578|gb|EFH73415.1| prolyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +   + + ++A
Sbjct: 540 DEGHFEYKNRRSGEKEAVAMASIIDFIQTKLA 571


>gi|222148633|ref|YP_002549590.1| threonyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254783504|sp|B9JWF4|SYT_AGRVS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221735619|gb|ACM36582.1| threonyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 666

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/399 (10%), Positives = 103/399 (25%), Gaps = 27/399 (6%)

Query: 98  NFDTIVFPCRTY-RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
           +             +     N        +   +   +  G      +    +  A    
Sbjct: 269 HGKGWKMFQSLTAYMRRRLANTYQEVNAPQVLDKSLWETSGHWGWYQENMFAVKSAHAFT 328

Query: 157 AVGIKRNDYHIGINNRKILDGILEKI------GLHGDDKLNERLIVLRAIDKLDKFGLQG 210
                  D  +         G ++              +L E  +V R        GL  
Sbjct: 329 NPNDPEADQRVFALKPMNCPGHVQIFKHGLKSYRELPVRLAEFGLVHRYEASGALHGLMR 388

Query: 211 VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN 270
           V+    +       +    A        I+  +     ++ + +L    +  +  ++ ++
Sbjct: 389 VRGFTQDDAHVFCTEEQMAAECLRINDLILSVYEDFGFKEVVVKLSTRPEKRVGSDELWD 448

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
               +   V K+    +  +I + I+ G   + G  +E  L   +  E Q          
Sbjct: 449 RAESVMTEVLKAIEEQSGGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNL 508

Query: 331 GGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
             R+         +            G     + +     + +      P+ +      S
Sbjct: 509 PERFGAFYIDQHSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPLQVVVATITS 568

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGE 439
           ++    +   + LR AG+  E    + K        + G           P+ ++ G  E
Sbjct: 569 EADDYGRDVAEQLRDAGLEVETDFRNEKINYKVREHSVGK---------VPVIMVCGKRE 619

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
                + I+ L    ++S  +    +          +  
Sbjct: 620 AEERTVNIRRLGSQDQVSMTLDEAIASLVDEATPPDVKR 658


>gi|254444928|ref|ZP_05058404.1| threonyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198259236|gb|EDY83544.1| threonyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 610

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   V    F        + ++              V I  +          Q   
Sbjct: 471 NKPHRPVMVHRAPFGSMERFCGLLIEHFGGDFPTWLAPEQVRILPIS--DKVADYAQSLL 528

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             L+  G+RA     S K  G +++ A+    P  +I G  E     + ++
Sbjct: 529 DQLKANGVRATADFNSDK-LGAKIRNAELDKVPNTLIVGEREAEENKVSVR 578


>gi|167947531|ref|ZP_02534605.1| prolyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 110

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLAAGLYTWLPLGLRVLRKVEAIVREEMDRAGALELLMPAVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L+D   +      
Sbjct: 90  GPELLRLKDRHQREFCFGP 108


>gi|254225105|ref|ZP_04918719.1| prolyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125622492|gb|EAZ50812.1| prolyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  +I G    
Sbjct: 481 MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTLIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +   +  A++A
Sbjct: 540 DEGHFEYKNRRSGEKEAVAMASIIDFIHAKLA 571


>gi|237785730|ref|YP_002906435.1| prolyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758642|gb|ACR17892.1| Prolyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 594

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/179 (10%), Positives = 57/179 (31%), Gaps = 25/179 (13%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG- 376
           E       G          ++     ++ P  G        +VA+ + +   +   +   
Sbjct: 434 EIGHIFQLGRKYTNAFELDVLDENGKRSRPTMGSYGVGVSRLVAVVAEQYHDDKGLKWPV 493

Query: 377 -----PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                PV +   + D+++        + L   G+          + G + K ++    P 
Sbjct: 494 SVAPFPVHLVVANKDAEAAEAASTLAEELSNRGLDILFDDRPKVSPGVKFKDSELLGMPY 553

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
            ++ G      G ++++D          + ++           T+P+ +    + ++++
Sbjct: 554 VVVLG-RAFKEGKIEVRD---------RLADSVE---------TVPVDDAAEHIARLVK 593



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 23/76 (30%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +  G        +++   I   +R   +  G   IE P L   D+  +           
Sbjct: 40  RIAPGVYSWLPLGLKVLRNIERIVREEMDGIGAQEIELPALLPRDAY-EVTGRWTEYGDA 98

Query: 70  VFSLQDDDGQWISLRY 85
           +F L+D       L  
Sbjct: 99  LFRLKDRKKGDYLLGP 114


>gi|229525492|ref|ZP_04414897.1| prolyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339073|gb|EEO04090.1| prolyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|327483617|gb|AEA78024.1| Prolyl-tRNA synthetase Bacterial type [Vibrio cholerae LMA3894-4]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +   + +A++A
Sbjct: 540 DEGHFEYKNRRSGEKEAVAMASIIDFIQAKLA 571


>gi|50954739|ref|YP_062027.1| threonyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|71657985|sp|Q6AFC3|SYT_LEIXX RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|50951221|gb|AAT88922.1| threonyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 695

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 42/139 (30%), Gaps = 10/139 (7%)

Query: 347 PATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
                        + L+    +    +     V I   D     L         LR  G+
Sbjct: 562 HRALLGSIERFFAILLEHHAGAFPVWLAPTQVVGIPVADAYGPFLDD---VIAQLRARGV 618

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           RAE+     +    +++   +   P  +I G  + S G +  +    G +L+    +   
Sbjct: 619 RAEVDHSDDR-MQKKIRTHTKAKVPFQLIVGEEDASAGTVSFR-FRDGTQLNGVAVDEAI 676

Query: 466 WREARVAQITIPISELVST 484
            R     Q      ELV T
Sbjct: 677 ERIVASIQTH----ELVDT 691


>gi|326780460|ref|ZP_08239725.1| threonyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326660793|gb|EGE45639.1| threonyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 658

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/451 (11%), Positives = 113/451 (25%), Gaps = 52/451 (11%)

Query: 49  LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAE---NFDTIVF 104
            LE+ +   K    +      +FS  D+ G  +++        + R   E          
Sbjct: 248 HLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKG--GVIRRAMEDYSRRRHEEE 305

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
                      + +         +    +       +  D  +  M       +   R  
Sbjct: 306 GYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGR 365

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
            +  +  R    G + +    G      R       D       + +   L     D + 
Sbjct: 366 SYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-----DRTL 420

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV---RK 281
            F           D  +   + D EK +       + T    +   +  +          
Sbjct: 421 TFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATETLRQVAEKQGLPLVPDPGGAA 480

Query: 282 SGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                  ++    I R  +  T    +     F +            V            
Sbjct: 481 FYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQRPVM----------- 529

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                +    F        V L+    +      + PV    +      +   Q +    
Sbjct: 530 -----IHRALFGSIERFFAVLLEHYAGAFPVW--LAPVQAVGIPIGDAHIPYLQEFAAKA 582

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R  G+R ++   S +    +++   +   P  II G  + + G +  +    G + +   
Sbjct: 583 RKQGLRVDVDASSDR-MQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRY-RDGSQENG-- 638

Query: 461 KNNESWREARVAQITIPISELVSTVKKILQE 491
                          IP+ E ++ + K +++
Sbjct: 639 ---------------IPVDEAIAKIAKAVED 654


>gi|224283116|ref|ZP_03646438.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313140266|ref|ZP_07802459.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313132776|gb|EFR50393.1| threonyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 676

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/408 (10%), Positives = 107/408 (26%), Gaps = 50/408 (12%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDADGNITKPGADYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   L+   +++           S  +  + V      E+ 
Sbjct: 417 EQMKDELTSLLTFVL-NLLKDFGLSDFYLEL-----------STKDPDKYVGSDEIWEEA 464

Query: 269 FNELVVISE--LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
              L  ++E   +               I        G  ++        N  ++     
Sbjct: 465 TRTLREVAEASHLDLVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPER----- 519

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                       +  +   +    F        V L+    +      + PV +  +   
Sbjct: 520 --FQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVA 575

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +       + + L    +R E+     + FG +++ A +   P  +I G  + +   + 
Sbjct: 576 DEFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVS 634

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
            +    G  L+                  +P+ E    +  ++++  +
Sbjct: 635 FR-FRDGSRLNG-----------------VPVDEAREKILAVIKKRAQ 664


>gi|207111812|ref|ZP_03245974.1| histidyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 37

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
              NF  Q K AD+    +A++ G  E +   + +
Sbjct: 3   GGGNFKKQFKRADKVGAVVALVLGENEVAENTVVL 37


>gi|317402479|gb|EFV83047.1| ProS protein [Achromobacter xylosoxidans C54]
          Length = 576

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        ++I  ++   +R      G   +  P+++ ++   +     ++ 
Sbjct: 31  MIRKLAGGIYTYMPLGLKIIRKVEAIVREEMNASGAIELLMPVVQPAELWMES-GRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   L+    ++   +AR    ++  +       +             
Sbjct: 90  GAELLRIKDRHQRDFVLQPTSEEVITDIARNEIHSYRQLPLNFYHIQTKFRDERRPRFGL 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D   + A+ +   M          +G
Sbjct: 150 MRGREFTMKDAYSFDRDEAGAQKSYDNMYAAYMRIFGRLG 189


>gi|323344262|ref|ZP_08084488.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323094991|gb|EFZ37566.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 654

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/350 (10%), Positives = 98/350 (28%), Gaps = 17/350 (4%)

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
            +  + +     + +  E  +  +  M       V   +   +  +  R    G + +  
Sbjct: 311 HYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVFAWKPRSYKDLPLRIAEFGTVYRYE 370

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
             G+     R+      D         VK                      + +  + +F
Sbjct: 371 KSGELHGLTRVRSFTQDDAHIFCRPDQVKSEFLRVMD------------IIQTVFKIFNF 418

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            + + + S+ +  +  +  I  ++ + E     +          +I        G +   
Sbjct: 419 DNFEAQISLRDPKDR-EKYIGADEVWEESEQAIKEACAEKGLDAKIAYGEAAFYGPKLD- 476

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V +AI     +   Q              D    +     +    F        V ++
Sbjct: 477 FMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTDEDNVKKTPVMIHRAPFGSLERFTAVLIE 536

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                         V I  +          +  ++     G+RA +    ++  G +++ 
Sbjct: 537 HTAGHFPLWLTPDQVAILPIS--EKYNDYAKKVSKYFDAQGVRATID-DRNEKIGRKIRD 593

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +    P  +I G  E + G++ ++    G++ +  ++         VA+
Sbjct: 594 NELMRVPYMVIVGEKEAADGLVSMRKQGGGEQATMTMEEFAKRINGEVAE 643



 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 20/48 (41%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           +G      K   +R R+ D +R I + +G+  + TP +   +      
Sbjct: 263 KGLPIWLPKGTELRLRLQDMLRKIQKRFGYQEVITPHIGSKNLYVTSG 310


>gi|314981048|gb|EFT25142.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315091876|gb|EFT63852.1| threonyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
          Length = 689

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTGFAEVLGSHGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQINGVVLDEA 662


>gi|282853974|ref|ZP_06263311.1| threonine--tRNA ligase [Propionibacterium acnes J139]
 gi|282583427|gb|EFB88807.1| threonine--tRNA ligase [Propionibacterium acnes J139]
          Length = 684

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 409 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDEDWQ 468

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 469 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 528

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 529 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 587

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 588 VTGFAEVLGSHGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 645

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 646 GSQINGVVLDEA 657


>gi|126466028|ref|YP_001041137.1| glycyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014851|gb|ABN70229.1| glycyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 588

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 2/80 (2%)

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
                 +S  +   + L    I A  +     + G +   AD    P AI          
Sbjct: 493 PEHKKMVSIARQVYRALLENNILA--YYDEEGSIGRRYARADEIGIPYAITIDYQTLEDE 550

Query: 444 MLQIKDLAKGKELSREIKNN 463
            + ++D    +++   I+  
Sbjct: 551 TVTLRDRDSREQIRLHIQEL 570


>gi|330994118|ref|ZP_08318046.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329758585|gb|EGG75101.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 644

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/249 (12%), Positives = 65/249 (26%), Gaps = 8/249 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E    +     +  +                  G +     +E   
Sbjct: 384 DDAHIFCTEDQIADETARFVRMLADVYQDLGFEHFRVKFADRPEQRAGDDATWDRAENAL 443

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           K   +   +        G  Y      E +L   +  + Q   +        R D     
Sbjct: 444 KVACDMAGVTYEHNPGEGAFYG--PKLEFVLRDAIGRDWQCGTLQVDYVLPERLDASYVG 501

Query: 341 FKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
                               R +  L    +    +  + PV +      +D+    Q  
Sbjct: 502 EDSARHRPVMLHRAILGSFERFLGILIEQHAGRFPLW-LAPVQVVVASIVTDAADYAQQV 560

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              LR AG+  E  L  ++    +++       P+ ++ G  E     + ++ L    + 
Sbjct: 561 ADRLRAAGLVVEADL-RNEKINAKIREHSLARVPVILVVGRKEAEENTVAMRRLGGKAQE 619

Query: 457 SREIKNNES 465
              +    S
Sbjct: 620 VLPLDEAVS 628



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/150 (10%), Positives = 45/150 (30%), Gaps = 6/150 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF--SLQD 75
              K  R+ + + D +R   +  G+  + TP L    +L +     D+  + +F  +++D
Sbjct: 266 WHPKGWRLYSVLQDYMRRAQDRNGYQEVRTPQLVDR-ALWEASGHWDKYREHMFIATVED 324

Query: 76  DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP-VFRNEKHGPGRFRQFIQCDVD 134
           +D + ++L+        +    +                     +               
Sbjct: 325 ED-KTLALKPMNCPCHVQIF-RHGLRSYRELPLRMAEFGACHRYEPSGALHGIMRVRGFT 382

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRND 164
              +     + ++    A  +  +     D
Sbjct: 383 QDDAHIFCTEDQIADETARFVRMLADVYQD 412


>gi|317052582|ref|YP_004113698.1| threonyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316947666|gb|ADU67142.1| threonyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 657

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 74/234 (31%), Gaps = 6/234 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F +   +  E  +++   L         ++   +        G +E+   +E
Sbjct: 384 FCQDDAHIFCRPDQIEDEIKNLIDLILKTYKVFDFEDIAIGLSTRPEKSIGSDEIWQKAE 443

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRY 334
               +  NS  +K S     G  Y     ++         +              G    
Sbjct: 444 SALAAALNSLSVKFSINEGDGAFYGPKIDFQVRDAIRRSWQLATVQLDFSMPQRFGASYV 503

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D    R     +           + + L+    +      + PV  + +  + + L   Q
Sbjct: 504 DEQGQRQAPVMIHRAVLGSIERFMGLYLEHTAGALPFW--LAPVQCSIIPVNDELLPFCQ 561

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q+L   G R E+   SS++ G +++ +  +  P  ++ G  E    +  ++
Sbjct: 562 QLRQILTRLGYRVEVD-ASSESMGKKIRRSQTQKHPYTLVVGKKELEERIFAVR 614



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 3/107 (2%)

Query: 16  ADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQD 75
                K   + N++L+ IR +Y  YG+  + TP +   + L K     D   + ++   +
Sbjct: 269 PFFHPKGTVVYNQLLEFIREMYRYYGYGEVITPQVMDVE-LWKRSGHYDNYVENMY-FTE 326

Query: 76  DDGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            DGQ  +L+       +  Y A +      P R    G + R E+ G
Sbjct: 327 LDGQHNALKPMNCPTHVMIYGASSRSYRDLPVRYADFGRLHRYERSG 373


>gi|227485697|ref|ZP_03916013.1| threonine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236252|gb|EEI86267.1| threonine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 640

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + + N +L   R++ ++ G+  I+TPL+   D   +     D   + ++  
Sbjct: 262 GFPFFHPNGMILMNELLGWWRDVLDHSGYGEIKTPLILNEDLWHRS-GHWDHYKENMY-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              D +  +++           A    +    P R    G V R+E  G   
Sbjct: 320 TKIDDEDYAIKPMNCPGSVLTYASRQHSYRDLPIRLAEFGQVHRHELSGTLH 371



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 30/92 (32%), Gaps = 1/92 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +        K     + +  AG R  +    S+  G +++ A        ++ G  
Sbjct: 540 QVEVIPVADRFADKAHEIAKEIEKAGFRVGVD-ERSEGVGYKIRSAQMMRTNYMLVVGDK 598

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           E   G+L +++    +     + +  +     
Sbjct: 599 EIESGLLTVRNRDGEETKDVNLADFIAKISEE 630


>gi|161525965|ref|YP_001580977.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189349316|ref|YP_001944944.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221202408|ref|ZP_03575440.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208132|ref|ZP_03581137.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221213248|ref|ZP_03586223.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|226699126|sp|A9AI56|SYP_BURM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160343394|gb|ABX16480.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333338|dbj|BAG42408.1| prolyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221166700|gb|EED99171.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221172035|gb|EEE04477.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221177685|gb|EEE10100.1| prolyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 578

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPIGLRSIRKVEAIVREEMNRAGAVELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 21/86 (24%), Gaps = 3/86 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M +D               L  AGI   +     +  G  
Sbjct: 463 DDKGIIWPESIAPFEVVLCPMGYDRSDAVREAADKLYAELTAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQ 446
               +    P  ++ G      G ++
Sbjct: 522 FADWELIGVPHRLVIGERGLKDGKIE 547


>gi|89100585|ref|ZP_01173444.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084689|gb|EAR63831.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 423

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 33/90 (36%), Gaps = 2/90 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K +++RN + +  +  +   G+  ++TP++    +L +     D  ++ ++  
Sbjct: 49  GMPFYLPKGMQVRNILENLWKQKHHKAGYHEVKTPIM-MKQALWEQSGHWDHYHENMY-F 106

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIV 103
              D    +++           +    +  
Sbjct: 107 SKVDEHDYAIKPMSCPGAVLIYSSKRRSYR 136



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/347 (12%), Positives = 89/347 (25%), Gaps = 16/347 (4%)

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
            ++  +  N          + +     +   A    +       + +    +  +DY I 
Sbjct: 58  MQVRNILENLWKQKHHKAGYHEVKTPIMMKQALWEQSGHWDHYHENMYFSKVDEHDYAIK 117

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             +      I         +       +           L G+  +    + D       
Sbjct: 118 PMSCPGAVLIYSSKRRSYRELPLRYAELGLVHRHELSGSLNGLLRVRSFTQDDAH--LFV 175

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
             +   E+   ++  +         E    +        G  E   ++E   +S      
Sbjct: 176 REDQIKEEAAKVLELVHEFYSLFGFEYKVELSTRPEEFMGSEETWNLAEASLESVLQERG 235

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ-------KPVVFGSVGGGGRYDGLVSRF 341
           I        G  Y     +          +          P  FG    G   D L  R 
Sbjct: 236 IPFEINSGDGAFYGPKIDFHITDSLGRSWQCGTVQLDFQMPEQFGCQYIGE--DNLAHRP 293

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
              +    G    I R +  L    +       + PV    +      +         L 
Sbjct: 294 IMIHRAIYGS---IERFLAILIEHYAGDFPFW-LSPVQAMVLPVSEAHIGYALEVKARLE 349

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            AG R ++    ++  G +++ A+ +  P  II G  E  +G   ++
Sbjct: 350 EAGCRIDID-SRAEKLGLKIREAELQKVPYMIIIGEKEIEQGGAALR 395


>gi|258543038|ref|YP_003188471.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634116|dbj|BAI00092.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637176|dbj|BAI03145.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640228|dbj|BAI06190.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643285|dbj|BAI09240.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646340|dbj|BAI12288.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649393|dbj|BAI15334.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652379|dbj|BAI18313.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655437|dbj|BAI21364.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 645

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/339 (11%), Positives = 91/339 (26%), Gaps = 13/339 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
             +S         M +A   +              + +I    L         ++ E   
Sbjct: 306 WEASGHWDKYRHHMFIATVEDENKTLALKPMNCPCHVQIFRHGLRSY-RELPLRMAEFGA 364

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
             R        GL  V+        D++  F     +  E +  +     +  +     +
Sbjct: 365 CHRYEPSGALHGLMRVRG----FTQDDAHIFCTEDQIADETVRFVKMLHDVYQDLGFEHV 420

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
                       G +E+   +E   K       ++       G  Y      E +L   +
Sbjct: 421 RVKFADRPEQRAGSDEVWDKAENALKEACTVAGVEYEHNPGEGAFYG--PKLEFVLRDAI 478

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNN 371
             + Q   +   +    R D                         R +  L    +    
Sbjct: 479 GRDWQCGTLQVDLVLPERLDASYIGEDSGRHRPVMLHRAILGSFERFLGILIEQHAGRFP 538

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + PV +      SD+    +     LR AG+  E  + + K    +++       P+
Sbjct: 539 LW-LAPVQVVVASIVSDAAPYAEEVAAALREAGLAVEADVRNDK-INAKVREHSVARVPV 596

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            ++ G  E     + ++ L    + +  + +  +  +  
Sbjct: 597 ILVVGRREAEERTVAMRRLGTQVQETLSLDDAVARLKNE 635



 Score = 40.2 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF--SLQD 75
              K  R+   + D +R     +G+  + TP L    +L +     D+    +F  +++D
Sbjct: 268 WHAKGWRLYTALQDYMRRAQTRHGYQEVRTPQLVDR-ALWEASGHWDKYRHHMFIATVED 326

Query: 76  DDGQWISLRYDLTA 89
           ++ + ++L+     
Sbjct: 327 EN-KTLALKPMNCP 339


>gi|291613215|ref|YP_003523372.1| prolyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583327|gb|ADE10985.1| prolyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 566

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/157 (10%), Positives = 41/157 (26%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  ++   +R      G   +  P ++ ++ L +     D     
Sbjct: 34  KLSSGLYTWMPLGLRVLRKVEAVVREEMNKSGGIELLMPAVQPAE-LWQETGRWDVFGPQ 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGP 122
           +  ++D             ++   +AR   +++  +       +                
Sbjct: 93  MLKIKDRHDNLFCFGPTHEEVITDIARREVKSYRQLPLNFYQIQTKFRDEVRPRFGVMRA 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F         +   S E     M          +G
Sbjct: 153 REFVMKDAYSFHSSFESLEQTYRVMYETYTRIFTRLG 189


>gi|291299890|ref|YP_003511168.1| threonyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290569110|gb|ADD42075.1| threonyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 668

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 45/122 (36%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    +++     +   LR  GIRAE+     +    +++ A  +  P  +
Sbjct: 561 WLAPVQAVGIPIRDENVPYLDEFVAKLRAEGIRAEVDTSDDR-MQKKVRNAQLQKIPFMV 619

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  ++  G +  +    G + +                  +P+ E V+ V  +++   
Sbjct: 620 LAGDTDQEAGTVSFRY-RDGSQRNG-----------------VPLEEAVAHVTDVVRSRT 661

Query: 494 EE 495
            E
Sbjct: 662 NE 663



 Score = 36.7 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 17/48 (35%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
            G      K   IR  +   +R   ++ G++ + TP +   +      
Sbjct: 283 SGLPVFHPKGGIIRQEMESYLRQRQKDAGYELVNTPHITKENLFLTSG 330


>gi|182439796|ref|YP_001827515.1| threonyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|238689023|sp|B1W3F0|SYT_STRGG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|178468312|dbj|BAG22832.1| putative threonyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 658

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/451 (11%), Positives = 113/451 (25%), Gaps = 52/451 (11%)

Query: 49  LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAE---NFDTIVF 104
            LE+ +   K    +      +FS  D+ G  +++        + R   E          
Sbjct: 248 HLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKG--GVIRRAMEDYSRRRHEEE 305

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
                      + +         +    +       +  D  +  M       +   R  
Sbjct: 306 GYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGR 365

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
            +  +  R    G + +    G      R       D       + +   L     D + 
Sbjct: 366 SYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-----DRTL 420

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV---RK 281
            F           D  +   + D EK +       + T    +   +  +          
Sbjct: 421 TFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATETLRQVAEKQGLPLVPDPGGAA 480

Query: 282 SGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                  ++    I R  +  T    +     F +            V            
Sbjct: 481 FYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQRPVM----------- 529

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                +    F        V L+    +      + PV    +      +   Q +    
Sbjct: 530 -----IHRALFGSIERFFAVLLEHYAGAFPVW--LAPVQAVGIPIGDAHIPYLQEFAAKA 582

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R  G+R ++   S +    +++   +   P  II G  + + G +  +    G + +   
Sbjct: 583 RKQGLRVDVDASSDR-MQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRY-RDGSQENG-- 638

Query: 461 KNNESWREARVAQITIPISELVSTVKKILQE 491
                          IP+ E ++ + K +++
Sbjct: 639 ---------------IPVDEAIAKIAKAVED 654


>gi|254285550|ref|ZP_04960514.1| prolyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150424412|gb|EDN16349.1| prolyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  + +   + +A++A
Sbjct: 540 DEGHFEYKNRRSGEKEAVAMASIIDFIQAKLA 571


>gi|15640891|ref|NP_230522.1| prolyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121585725|ref|ZP_01675520.1| prolyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121728341|ref|ZP_01681371.1| prolyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673158|ref|YP_001216355.1| prolyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153819016|ref|ZP_01971683.1| prolyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823083|ref|ZP_01975750.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227081051|ref|YP_002809602.1| prolyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505518|ref|ZP_04395028.1| prolyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510812|ref|ZP_04400291.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229517932|ref|ZP_04407376.1| prolyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608537|ref|YP_002879185.1| prolyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254848011|ref|ZP_05237361.1| prolyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255744669|ref|ZP_05418620.1| prolyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262161198|ref|ZP_06030309.1| prolyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262168701|ref|ZP_06036396.1| prolyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|81858145|sp|Q9KTM7|SYP_VIBCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|172047427|sp|A5F340|SYP_VIBC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782925|sp|C3LTC5|SYP_VIBCM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|9655329|gb|AAF94037.1| prolyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121550088|gb|EAX60104.1| prolyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121629396|gb|EAX61826.1| prolyl-tRNA synthetase [Vibrio cholerae V52]
 gi|126510449|gb|EAZ73043.1| prolyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126519409|gb|EAZ76632.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|146315041|gb|ABQ19580.1| prolyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227008939|gb|ACP05151.1| prolyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227012695|gb|ACP08905.1| prolyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229344647|gb|EEO09621.1| prolyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229350777|gb|EEO15718.1| prolyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357741|gb|EEO22658.1| prolyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371192|gb|ACQ61615.1| prolyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254843716|gb|EET22130.1| prolyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255737700|gb|EET93094.1| prolyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262022819|gb|EEY41525.1| prolyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262028948|gb|EEY47601.1| prolyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 571

 Score = 56.4 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+  +G++ +  +++   + +A++A
Sbjct: 540 DEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 571


>gi|218662034|ref|ZP_03517964.1| threonyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 305

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 80/248 (32%), Gaps = 8/248 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNELVVIS 276
           D++  F     + +E + I    LS+  +    E+   +          +  ++    + 
Sbjct: 32  DDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVM 91

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
             V K+    +  +I + I+ G   + G  +E  L   +  E Q            R+  
Sbjct: 92  TDVLKTIEAQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGA 151

Query: 337 LVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                  +            G     + +     + +    + P+ +      S++ +  
Sbjct: 152 FYIDSNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATITSEADAYG 211

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
               + LR AG+  E     ++    +++       P+ I+ G  E     + I+ L   
Sbjct: 212 LEVAEALREAGLNVETDF-RNEKINYKIREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQ 270

Query: 454 KELSREIK 461
            ++S  + 
Sbjct: 271 DQVSMGLD 278


>gi|21428938|gb|AAM50188.1| GH20022p [Drosophila melanogaster]
          Length = 747

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 64/221 (28%), Gaps = 21/221 (9%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL   ++  +    + N   +      G   + G   +  +   +    Q   +      
Sbjct: 534 ELEQWNDAEKALAESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQLDFQL 593

Query: 331 GGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
             R++       G+           +G    ++A+ +   +      + P  +  +    
Sbjct: 594 PIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQVMVVPVGP 653

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                 Q     L  AG  +E    +      +++ A        ++ G  ERS   + +
Sbjct: 654 AYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNV 713

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           +                           + ++EL++ ++KI
Sbjct: 714 R------------------TRDNKVHGEVSVAELITKLQKI 736



 Score = 38.3 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++  I+  Y   GF  + +P + Y+  L           + +FS + + 
Sbjct: 371 FQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYAENMFSFEAEK 429

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 430 -EKFALKPMNCPG 441


>gi|21224048|ref|NP_629827.1| prolyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256784874|ref|ZP_05523305.1| prolyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289768768|ref|ZP_06528146.1| prolyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|15214317|sp|Q9KYR6|SYP_STRCO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|7801271|emb|CAB91135.1| prolyl tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289698967|gb|EFD66396.1| prolyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 567

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 6/162 (3%)

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGG-RYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                L      E       G       + D L    K   V    + IG+SR + AL  
Sbjct: 400 NCGTGLKLDRAIEIGHIFQLGRKYADALKLDVLGQNGKPARVTMGSYGIGVSRAVAALAE 459

Query: 365 L---ESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
               +      KE+ P  +  +       ++     +  L  AG+R  +   +  + G +
Sbjct: 460 QHADDKGLVWSKEVAPADVHVVAAGKALQTELALEVSDKLAAAGVRVLVDDRAGVSPGVK 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              A+    P  ++ G      G++++KD   G+     ++ 
Sbjct: 520 FTDAELIGVPQILVAGRRSGE-GVVELKDRRTGEREEVTVEE 560



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++   I   +R   +  G   ++ P L   +               +F LQD  
Sbjct: 48  WLPLGKKVLGNIERIVREEMDAIGAQEVQLPALLPREPYEA-TGRWQEYGPELFRLQDRK 106

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 107 GGDYLLGP 114


>gi|106364390|dbj|BAE95216.1| predicted threonyl-tRNA synthetase [unclutured Candidatus
           Nitrosocaldus sp.]
          Length = 685

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            L         L  + IR ++     ++ G +++ A+    P  ++ G  E +   L ++
Sbjct: 582 YLDYCNSIMHRLERSSIRVDID-DRDESVGKRIREAEMEWIPYIVVVGEKEIASDRLSVR 640

Query: 449 DLAKGKELSREIKNNE 464
           D A GK     ++  E
Sbjct: 641 DRASGKVREMSVEELE 656


>gi|24583839|ref|NP_723725.1| Threonyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|22946307|gb|AAF53166.2| Threonyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|211938559|gb|ACJ13176.1| FI05224p [Drosophila melanogaster]
          Length = 747

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 64/221 (28%), Gaps = 21/221 (9%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL   ++  +    + N   +      G   + G   +  +   +    Q   +      
Sbjct: 534 ELEQWNDAEKALAESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQLDFQL 593

Query: 331 GGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
             R++       G+           +G    ++A+ +   +      + P  +  +    
Sbjct: 594 PIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQVMVVPVGP 653

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                 Q     L  AG  +E    +      +++ A        ++ G  ERS   + +
Sbjct: 654 AYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNV 713

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           +                           + ++EL++ ++KI
Sbjct: 714 R------------------TRDNKVHGEVSVAELITKLQKI 736



 Score = 38.3 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++  I+  Y   GF  + +P + Y+  L           + +FS + + 
Sbjct: 371 FQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYAENMFSFEAEK 429

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 430 -EKFALKPMNCPG 441


>gi|298499001|ref|ZP_07008808.1| prolyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|297543334|gb|EFH79384.1| prolyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 571

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+  +G++ +  +++   + +A++A
Sbjct: 540 DEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 571


>gi|291519633|emb|CBK74854.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Butyrivibrio
           fibrisolvens 16/4]
          Length = 588

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/403 (10%), Positives = 103/403 (25%), Gaps = 30/403 (7%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +      +     +   K     +   +   V  V     +   +      +   A+ 
Sbjct: 207 MYLPNGYTIWTELENYIRNKERKLGYLHVMTPCVGTVQLYQTSGHWDHYKE--NMFPAME 264

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
           ++   + +   N      I         +       +           L+G++      +
Sbjct: 265 VEGESFVLRPMNCPHHMRIFANRPHSYKELPIRIAEIAHDFRFESSGTLKGIERGRHFCQ 324

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK--GTIAGEKGFNELVVISE 277
            D S  F     + SE   +     S   +  + +   ++        +K   +  + + 
Sbjct: 325 ND-SHIFCTQEQIKSEVKSVCDLIFSTYEDFGITDYRCVLSLRDPADTKKYHQDDEMWNT 383

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
             +        I I  T   G   + G   +  +   + NE              ++D  
Sbjct: 384 AEQALRETLTEIGIEFTEEIGEAAFYGPKLDVNVKPAIGNEITLSTCQLDFCLPAKFDLT 443

Query: 338 VSRFKGQNVPATGF-----SIGISRLIVALKSLESSTNNIKEMGPVLITTM-DHDSDSLS 391
            +                       +   L+  + +         V +  + + D+D  +
Sbjct: 444 YTDADSNKQTPVVIHRAILGSLDRFMAYILEETKGNLPLWLAPTQVKVLPVKNDDADLNA 503

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             Q     L  A +R E     S+  G +++ A  +  P   + G  E + G +  +   
Sbjct: 504 YAQKLVDALADADVRVEFD-TRSEKLGYKMREAQIQKVPYLAVLGKNEEAEGTVSYR--- 559

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
                                  T+   E V  +   ++    
Sbjct: 560 ---------------LHGEHGTTTVKFDEFVELIVNEIKSKGR 587



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/238 (10%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG          I   + + IRN     G+  + TP +             D   + +F 
Sbjct: 203 RGLPMYLPNGYTIWTELENYIRNKERKLGYLHVMTPCVGTVQLYQTS-GHWDHYKENMFP 261

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR        R  A    +           P+   E     RF       
Sbjct: 262 AMEVEGESFVLRPMNCPHHMRIFANRPHSYK-------ELPIRIAEIAHDFRFESSGTL- 313

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                      +        + +++      D          +      + L       +
Sbjct: 314 KGIERGRHFCQNDSHIFCTQEQIKSEVKSVCDLIFSTYEDFGITDYRCVLSLRDPADTKK 373

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                   +  ++   + +  +  E   +       G  L       + + +++   +
Sbjct: 374 YHQDDEMWNTAEQALRETLTEIGIEFTEEIGEAAFYGPKLDVNVKPAIGNEITLSTCQ 431


>gi|262202217|ref|YP_003273425.1| threonyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085564|gb|ACY21532.1| threonyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 691

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 57/477 (11%), Positives = 124/477 (25%), Gaps = 85/477 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  + D  R  +   G++ + TP     D         D    G++ 
Sbjct: 281 SGLPVFHPKGGVIRKELEDYSRLRHAQAGYEFVYTPHATKGDLF-SLSGHLDWYADGMYP 339

Query: 73  LQDDDGQWISLRYDLTA--PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
               D +  +   D T   P   Y  +  +  +        G  +R        F    +
Sbjct: 340 PMQLDEEVDA---DGTVRRPAIDYYLKPMNCPMHNLIFRSRGRSYRELPLRLFEFGTVYR 396

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
            +   V      A               G  ++D HI     ++ + +   +    D   
Sbjct: 397 YEKSGVVHGLTRAR--------------GFTQDDAHIYCTREQMGEEVRSLLQFVLDLLR 442

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
           +  L        L+       K +  +   + + +  + A  +       +  +      
Sbjct: 443 DYGLDDFY----LELSTRNPDKSIGSDEAWEEATEVLRAAATSFG-----LDLVDDPGGA 493

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           + +     V+   A  + +  +  I   +            +             ++ +I
Sbjct: 494 AFYAPKISVQARDAIGRTWQ-MSTIQVDMMLPDRFELEYTGTDGAKHRPVMIHRALFGSI 552

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
             F  +  +     F +                                           
Sbjct: 553 ERFFGVLTEHYAGAFPAWLS---------------------------------------- 572

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                 PV +  +          Q     LR AG+RAE+     +    +++       P
Sbjct: 573 ------PVQVVGIPVADAFADHLQGVVDTLRAAGLRAEVDHSDDR-MQKKIRNHTTGKVP 625

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELV 482
             ++ G  +   G +  +    G +     ++  +     W  +R  +   P +ELV
Sbjct: 626 FMLLAGERDVEAGAVSFR-FRDGTQVNGVPVAEAVGIITDWVTSRRNES--PTAELV 679


>gi|153802043|ref|ZP_01956629.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124122402|gb|EAY41145.1| prolyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 571

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+  +G++ +  +++   + +A++A
Sbjct: 540 DEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 571


>gi|62897187|dbj|BAD96534.1| threonyl-tRNA synthetase-like 1 variant [Homo sapiens]
          Length = 718

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/463 (11%), Positives = 117/463 (25%), Gaps = 86/463 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y + GF  ++TP L         L +               
Sbjct: 324 FLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTL-----FSTKLWE-------------QS 365

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G W                E++             P                  D   + 
Sbjct: 366 GHW----------------EHYQED----MFAVQPPGSDRPPSSQSDDSTRHITDTLALK 405

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 406 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGGLGGLTRLRCF 454

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + +   
Sbjct: 455 QQDDAHIFCTTDQLEAEIQ-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGDPCL 507

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 508 WDQAEQVLKQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 567

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +  K +    G                   V      +G    ++ + +         
Sbjct: 568 D-LQYKGQAGALGR-----------------PVLIHRAVLGSVERLLGVLAESCGGKWPL 609

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +   S+     +   Q LR AG+ +++   S      +++ A   +     
Sbjct: 610 WLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQF 669

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 670 VVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 704


>gi|254778840|ref|YP_003056945.1| threonyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254000751|emb|CAX28675.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Helicobacter pylori B38]
          Length = 612

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 85/263 (32%), Gaps = 9/263 (3%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F     + SE +  ++ F    ++         +    A   G +E+   +
Sbjct: 354 EFTQDDAHIFCSFEQIQSE-VSAILDFTHKIMQAFGFSYEMELSTRPAKSIGDDEVWEKA 412

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG--GGRY 334
               K     +RI        G  Y      +       +  K +               
Sbjct: 413 TDALKEALKEHRINYKIDEGGGAFYGPKIDIKIT---DALRRKWQCGTIQVDMNLPERFK 469

Query: 335 DGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
               + +     P       +G     +A+ S     N    + P  I  +  + +    
Sbjct: 470 LAFTNEYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVF 529

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + L+   I  E+   +  +   +++ A+++  P+ ++ G  E    +L I+D  K
Sbjct: 530 ALKLKEELKKHDIFVEVLDKND-SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588

Query: 453 GKELSREIKNNESWREARVAQIT 475
             +    +K   +  E+++ +++
Sbjct: 589 QAQYKMPLKEFLNMVESKMQEVS 611



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 67/258 (25%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSRALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSTLHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFGFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      +K      + +K      + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDEVWEKATDALKEALKEHRINYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEYNHAE 480


>gi|289624295|ref|ZP_06457249.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289646578|ref|ZP_06477921.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330870143|gb|EGH04852.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 192

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 4/126 (3%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-AR 93
            I+   G +    P L   D+  +     +  +  +++  D  G+   L  + TA    R
Sbjct: 9   AIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIS-QMWAFNDKAGRACCLIPEATALFQER 67

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
             +E           + +   +R E+   GR+R+F Q  ++  G S + A      +   
Sbjct: 68  --SEALLNGRREAVFFYVARCYRYERPQAGRYREFTQLGLEIFGPSPQQALQRSQAICTG 125

Query: 154 TLEAVG 159
            L+++G
Sbjct: 126 FLDSLG 131


>gi|314923371|gb|EFS87202.1| threonyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|315093365|gb|EFT65341.1| threonyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315103379|gb|EFT75355.1| threonyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327327544|gb|EGE69320.1| threonine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 689

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLQLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQINGVVLDEA 662


>gi|291456785|ref|ZP_06596175.1| threonine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291382062|gb|EFE89580.1| threonine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 677

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/370 (10%), Positives = 97/370 (26%), Gaps = 33/370 (8%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G   + +       ++    +             L+
Sbjct: 297 MHRKHHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDEDGNVTKPGFDYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            +    ++       R   +        G + +    G+     R+  L   D       
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTR 416

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           + +K  L    T    +  K   L+   +++           S  +  + V      E+ 
Sbjct: 417 EQMKDELTSLLTFVL-NLLKDFGLSDFYLEL-----------STKDPDKYVGSDEIWEEA 464

Query: 269 FNELVVISE--LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
              L  ++E   +               I        G  ++        N  ++     
Sbjct: 465 TRTLREVAEASHLDLVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPER----- 519

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                       +  +   +    F        V L+    +      + PV +  +   
Sbjct: 520 --FQLEYIAKDGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFPAW--LAPVQVLGVPVA 575

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +       + + L    +R E+     + FG +++ A +   P  +I G  + +   + 
Sbjct: 576 DEFAPHLAGFVKSLEDEMVRCEIDYSDDR-FGKKIRNASKSKVPFILIVGEEDMNNNAVS 634

Query: 447 IKDLAKGKEL 456
            +    G +L
Sbjct: 635 FR-FRDGSQL 643


>gi|206900126|ref|YP_002250745.1| threonyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739229|gb|ACI18287.1| threonyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 638

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 4/117 (3%)

Query: 333 RYDGLVSRFKGQ-NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
            YD      K    +           + + ++              V I  +    +  +
Sbjct: 492 TYDAPDGTKKRPVMIHRAILGSYERFIGILIEHYGGRFPLWLAPEQVRILPISEKHNEYA 551

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +Y    + LR   IRAE+          +L+ A     P   I G  E+  G + ++
Sbjct: 552 EY--VLRTLRDNEIRAEID-KDQAKLNYKLRKAIAEKVPYIFIVGDKEKEEGKVSVR 605



 Score = 41.7 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 10/192 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G    P K   +R  I +  R  +   G+ P+ TP L  ++ L K     D   + +F  
Sbjct: 258 GLIFYPPKGAMLRLIIEEFERKEHLKRGYLPVITPHLMQAE-LWKRSGHWDNYRENMF-F 315

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              + +  +++             +        R+YR  P+   E     R+ +      
Sbjct: 316 LQVEDKDYAVKPMNCPG-------HILIYNSKVRSYRDLPLRFFEMGTVYRYERSGVL-Y 367

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   T D        + LE       D+   + +   L   +  +    +  +   
Sbjct: 368 GLERARGFTQDDAHIFCTQEQLEDEIKGVLDFVFYMLDSFGLKDYVVTLSTKPEKYIGSD 427

Query: 194 LIVLRAIDKLDK 205
            I  +A   L  
Sbjct: 428 EIWEKATQALKN 439


>gi|89891844|ref|ZP_01203345.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89515749|gb|EAS18550.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 648

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 45/151 (29%), Gaps = 13/151 (8%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +           I ++       +  +   
Sbjct: 509 NESHRPVMIHRAPFGSMERFIAILLEHTGGNFPLWLMPEQCTILSLS--EKYENYAKQVA 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L    IR  +    ++  G +++ A+    P  +I G  E   G + ++         
Sbjct: 567 NSLENNEIRTTID-NRAETMGKKIREAEMNKLPYMLIVGEQEEKDGTISVR--------K 617

Query: 458 REIKNNESWREARVAQITIPISELVSTVKKI 488
               +  S      +Q+     E+ ST+K  
Sbjct: 618 HGGDDLGSMSVETFSQLI--KDEIASTIKTF 646



 Score = 37.9 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 18/47 (38%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R R+ D ++   +  G++ + +P +   +      
Sbjct: 262 GLPLWLPKGAALRERLEDFLKKAQKKAGYEMVVSPHIGSKELYVTSG 308


>gi|330836194|ref|YP_004410835.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta
           coccoides DSM 17374]
 gi|329748097|gb|AEC01453.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta
           coccoides DSM 17374]
          Length = 588

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 1/97 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +                LR  G+RA+  L   +    +++ A     P  ++ G  
Sbjct: 491 QIMVVPVGEAFFPYATALRDRLRKEGLRADADLSDDR-MNAKIRNAQLHKIPYQLVVGER 549

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           E+S   + ++     K       +  +  +A VA   
Sbjct: 550 EQSEDKVSVRYRNGNKANDVPTADFIAEVKAAVAARE 586


>gi|241763800|ref|ZP_04761846.1| prolyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366932|gb|EER61337.1| prolyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 580

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 45/115 (39%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++ +L  G  +     +R+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MTRAGLIK-KLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVELTMPVVQPAE-LWQET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              ++    +  +QD  G+   ++    ++   +AR   +++  +       +  
Sbjct: 84  GRFEKMGPELLRIQDRHGRDFVVQPTSEEVITDIARQELKSYKQLPKNFYQIQTK 138



 Score = 40.6 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 11/110 (10%), Positives = 29/110 (26%), Gaps = 3/110 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V+I  +  D      +  +     L  AG+   +     +  G  
Sbjct: 469 DERGIIWPDAIAPFTVVICPVGMDRSDAVKAAAEKLYADLLAAGVDVILD-DRGERPGAM 527

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +    P  +  G      G+++ +           + +  +  + R
Sbjct: 528 FADWELIGVPHRVTIGDKSLKEGVVEYQHRRDAAATKVAVADILARVKGR 577


>gi|325478873|gb|EGC81983.1| threonine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 640

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + + N +L    ++    G+  I+TPL+  +++L       D   + ++  
Sbjct: 262 GFPFFHPNGMILMNELLGWWTDVLNENGYGEIKTPLI-LNEALWHRSGHWDHYKENMY-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + DG+  +++           A N  +    P R    G V R+E  G   
Sbjct: 320 TEIDGEAYAVKPMNCPGSVLTYAANQHSYRDLPIRLAEYGQVHRHELSGTLH 371



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 39/117 (33%), Gaps = 19/117 (16%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +      +   +   Q ++ AG R  +    ++  G +++ A        ++ G  
Sbjct: 540 QVEIIPVSDKFIDYAEELKQKIKEAGFRVNIDY-RNEGVGYKIRQAQLMRTNYMLVVGEK 598

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           E + G L +++   G+E                    + + E +  + +      +E
Sbjct: 599 EETSGKLTVRN-RDGEETP-----------------DVSLDEFIEKISEEKASKSKE 637


>gi|295706837|ref|YP_003599912.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804496|gb|ADF41562.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 645

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 62/215 (28%), Gaps = 16/215 (7%)

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D EK   +     K     +   +EL    +     G  +         V+        +
Sbjct: 433 DTEKYFDDDAMWEKAQSMLKDAMDELD--LDYYEAEGEAAFYGPKLDVQVKTALGKEETL 490

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
               L F +        V               + +   +     S     +   ++  +
Sbjct: 491 STVQLDFLLPERFDLTYVGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYK 540

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +         V +  +      L   +   + L+ AGIR E+     +  G +++ A  
Sbjct: 541 GAFPTWLAPVQVQVIPVSPTV-HLQYAKEVQEQLQLAGIRVELD-SRDEKIGYKIREAQM 598

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +  P  ++ G  E     + ++    G++ S  + 
Sbjct: 599 QKIPYMLVVGDKEVEDKAVNVR--KYGEQNSETVD 631



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+  + TP+L   +   K     +     +F  
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEVSLGYQHVYTPVLGSVELY-KTSGHWEHYQDDMFPA 325

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D + + LR             +         +YR  P+   E     R+  
Sbjct: 326 MEMDNEDLVLRPMNCP-------HHMMVYKQGIHSYRELPIRIAELGTMHRYEM 372


>gi|171687735|ref|XP_001908808.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943829|emb|CAP69481.1| unnamed protein product [Podospora anserina S mat+]
          Length = 514

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 12/120 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI NR++  +RN Y  YGF+ + TPL+   D   K     +   + ++++
Sbjct: 98  GSAFFLPSGTRIFNRLVSFLRNQYVRYGFEEVITPLIYKKDLWAKS-GHLENYAQDMYTV 156

Query: 74  ----------QDDDGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                      ++  +   L+          + ++       P R     P+ RNE  G 
Sbjct: 157 TGARHASPEETEETDREYGLKPMNCPGHCLIFSSQKRSFRDLPIRYADFSPLHRNENTGS 216


>gi|88657672|ref|YP_507541.1| prolyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|114152195|sp|Q2GG92|SYP_EHRCR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88599129|gb|ABD44598.1| prolyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 424

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  ++  G        +++   I + +R      G   I  PL++ + SL K     D  
Sbjct: 31  LIKQIASGIYTWLPLGLKVLKNIENIVREEMNKSGSLEILMPLIQPA-SLWKESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWI 81
              +  + D + + +
Sbjct: 90  GSEMLRITDRNQREM 104


>gi|87303299|ref|ZP_01086092.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701]
 gi|87282194|gb|EAQ74155.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701]
          Length = 603

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 35/81 (43%), Gaps = 1/81 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +    + +   +     LR+AG+RA +     +  G  +++ +++  P+  + G  
Sbjct: 496 QVRLLPVTDEVIPYAEEVLGQLRSAGVRAAIDRSGDR-LGKLIRHGEQQKIPVLAVIGAK 554

Query: 439 ERSRGMLQIKDLAKGKELSRE 459
           E  +G + ++    G   S E
Sbjct: 555 EAEQGSVSLRSRRDGDLGSVE 575



 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I D  R  +   G+D + TP +    SL K     D  ++ +F  
Sbjct: 216 GLVFWHPRGARMRLLIEDFWRQAHFAAGYDLLYTPHVADL-SLWKTSGHLDFYSESMFGP 274

Query: 74  QDDDGQWISLRYD------LT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
              D +   L+        LT A   R           P R   +G V+R E+ G
Sbjct: 275 MQVDERQYQLKPMNCPFHVLTYASTLRSY------RELPIRWAELGTVYRYERPG 323


>gi|312870359|ref|ZP_07730484.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094060|gb|EFQ52379.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 600

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/399 (8%), Positives = 101/399 (25%), Gaps = 36/399 (9%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +           +   + +      +  + D+       +    E+  M  
Sbjct: 233 RYIIDR--EVADGYEHVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLEIRPMNC 290

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
            +   +       +  +  R    G++ +    G     +R+  +   D      +  ++
Sbjct: 291 PSHIQIYKHHIRSYRDLPMRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAVDQIR 350

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +        +             +  +      +      +        ++    L
Sbjct: 351 DEFAKILNLIMDVYKDF---------DITDYSFRLSLRDPKNKEKYYGNDEMWDESQKLL 401

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               + +    Y +     ++     L+  T       LG        +         G 
Sbjct: 402 KAAMDDLNLDYYEAEG--EAAFYGPKLDIQTKTA----LGNDETMSTIQLDFMQPDRFGL 455

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G   +     +   G    + R +  L  +             +      +      
Sbjct: 456 SYVGKDGKEHMPVMIHRGIVGTMERFVAYLTEIYKGAFPTWLAPEQVHIIPVSEEKHGDY 515

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q     ++ A IR  +    ++  G +++ A  +  P  ++ G  E     + ++    
Sbjct: 516 AQKLADKMKAAQIRVVVD-DRNEKMGYKIREAQTQKVPYTLVVGDDEVKNNAVSVR---- 570

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                         +    AQ ++   + ++ +   +  
Sbjct: 571 --------------KYGEDAQNSMSQDDFMNEILADIAS 595



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 74/262 (28%), Gaps = 14/262 (5%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  R + +  G++ + TP+L   D+  K     +     +F
Sbjct: 216 GLPYWMPKGATIRRTIERYIIDREVAD--GYEHVYTPVLMNLDAY-KTSGHWEHYRDDMF 272

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
              D   G+ + +R             +        R+YR  P+   E     R+ +   
Sbjct: 273 PPMDMGDGEMLEIRPMNCPS-------HIQIYKHHIRSYRDLPMRIAELGMMHRYEKSGA 325

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                      T +     +  D +     K  +  + +     +     ++ L      
Sbjct: 326 LS-GLQRVREMTLNDGHTFVAVDQIRDEFAKILNLIMDVYKDFDITDYSFRLSLRDPKNK 384

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            +        D+  K     +  L  +           G  L  +    + +  ++   +
Sbjct: 385 EKYYGNDEMWDESQKLLKAAMDDLNLDYYEAEGEAAFYGPKLDIQTKTALGNDETMSTIQ 444

Query: 251 SMHELYELVKGTIAGEKGFNEL 272
                 +    +  G+ G   +
Sbjct: 445 LDFMQPDRFGLSYVGKDGKEHM 466


>gi|330445168|ref|ZP_08308820.1| prolyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489359|dbj|GAA03317.1| prolyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 571

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E      D +     K  D        
Sbjct: 146 RFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLEYRP 194



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M    +     +     L  AGI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMAKSEEVKEAAEKLYAELTAAGIDV-LFDDRKERPGVMFADHELIGIPHTIVIGNRSL 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G ++ K+   G + +  + +   + + ++A
Sbjct: 540 ENGEMEYKNRRAGTKEAVAVNDVVEFLKQKLA 571


>gi|86134203|ref|ZP_01052785.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821066|gb|EAQ42213.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 647

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 3/135 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + V L+    +           +  +          +   
Sbjct: 509 NQSHRPVMIHRAPFGSMERFIAVLLEHTGGNFPLWLTPEQ--VIILPISDKYQKYTEKVL 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L  + IRA +   S K  G +++ A+    P  +I G  E   G + ++   +G   +
Sbjct: 567 ESLENSEIRALVDDRSEKT-GRKIRDAEVSKIPFMVIVGEKEEQDGTVSVRKHGEGDIGT 625

Query: 458 REIKNNESWREARVA 472
             I+  +S  +   +
Sbjct: 626 FTIEEFKSLIKEEES 640



 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 18/47 (38%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R R+ + ++   +  G++ + TP +   +      
Sbjct: 262 GLPLWLPKGAALRERLQNFLKAAQKKAGYEMVMTPHIGQKELYVTSG 308


>gi|170077251|ref|YP_001733889.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169884920|gb|ACA98633.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 604

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 3/119 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              V I  +    +     +     L+  GIR
Sbjct: 477 HRAPFGSLERLIGILIEEYAGDFPLWLAPEQVRILPVS--DEFYDYAKEQAAKLQAMGIR 534

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           A +   S +  G  ++ A+++  P+  I G  E     L I+  A G+  +  ++   S
Sbjct: 535 A-VADASGERLGKLIRNAEKQKIPVMAIAGAKEVEANSLSIRTRASGELGAIPMEEVIS 592



 Score = 37.5 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR+ + + ++      G+  + TP +   D   K         + +F
Sbjct: 218 GLPLWTPKGTLIRSTLENFLKAEQTKRGYQGVVTPHIARVDLF-KVSGHWQNYREDMF 274


>gi|120434969|ref|YP_860655.1| threonyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117577119|emb|CAL65588.1| threonyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 667

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 43/135 (31%), Gaps = 3/135 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +              +          Q   
Sbjct: 526 NESHRPVMIHRAPFGSMERFIAILLEHTGGNFPLWLMPEQA--IILSLSEKYEKYSQKVL 583

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            +L    IRA +    ++  G +++ A+    P  +I G  E   G + ++  ++G   +
Sbjct: 584 TLLENNEIRA-LADNRNETIGKKIREAEVNKYPYMLIVGEQEAKDGTISVRKHSEGDLGT 642

Query: 458 REIKNNESWREARVA 472
            +I++  +     + 
Sbjct: 643 MKIEDFANLINTEID 657



 Score = 38.3 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/240 (11%), Positives = 66/240 (27%), Gaps = 21/240 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS------LGKFLPDEDRPN 67
           G      K   +R R+ + ++   +  G++ + +P +   +         K+  D  +P 
Sbjct: 279 GLPLWLPKGAALRERLENFLKKAQKKAGYEMVVSPHIGSKELYVTSGHYAKYGEDSFQPI 338

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG-PVFRNEKHGPGRFR 126
                   ++G+   L+             +   +           P    E     R+ 
Sbjct: 339 S-----TPNEGEEFMLKPMNCP--------HHCEMYNASSWSYRDLPKRFAEFGTVYRYE 385

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           Q  +           T D      M + L+    K  D  + + +    +    ++ L  
Sbjct: 386 QSGELH-GLTRVRGFTQDDAHIFCMPEQLDEEFKKVIDLTLYVFSSLGFEDFTAQVSLRD 444

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            D   + +    A +K +   +            +       G  L     D +     +
Sbjct: 445 PDNKEKYIGSDDAWEKAESAIINAADEKGLNYVVETGEAAFYGPKLDFMVKDALGRSWQL 504


>gi|297279894|ref|XP_002808285.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase,
           mitochondrial-like [Macaca mulatta]
          Length = 669

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/468 (10%), Positives = 116/468 (24%), Gaps = 86/468 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP           L +               
Sbjct: 275 FLPRGTRVYNALVAFIRAEYARRGFSEVKTPT-----LFSTKLWE-------------QS 316

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G W                E++                                D+  + 
Sbjct: 317 GHW----------------EHYQED----MFAVQPSGSDRPASSQSDDSTRHTTDILALK 356

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 357 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGGLGGLTRLRCF 405

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + +   
Sbjct: 406 QQDDAHIFCTTDQLEAEIQ-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGDPCL 458

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 459 WDQAEQVLQRALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 518

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +  K +                        V      +G    ++ + +         
Sbjct: 519 D-LQYKGQAGALER-----------------PVLIHRAVLGSVERLLGVLAESCGGKWPL 560

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +   ++     +   Q LR AG+ +++   S      +++ A   +     
Sbjct: 561 WLSPFQVVVIPVGTEQEEYAREAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQF 620

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           + G  E+S+  + I+        +R+ +    W      Q  + +  +
Sbjct: 621 VVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLVELQNM 660


>gi|302865324|ref|YP_003833961.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302568183|gb|ADL44385.1| threonyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 404

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
              PV +  +  D+  +       +    AG+RAE+    + + G +++ A RR  P   
Sbjct: 299 WYAPVQLLLLPVDAAQVDAAVGLARRAEAAGLRAEVDH--AGSLGARIRDASRRRVPYTG 356

Query: 434 IQGTGERSRGMLQIKDLAKG 453
           + G  E + G + ++ L  G
Sbjct: 357 VLGPREAADGSVSLR-LRDG 375



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 21/75 (28%), Gaps = 6/75 (8%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF-- 71
          G           R+ + + +R +    G+  + +P L   +   +           +F  
Sbjct: 23 GLPIWLPAGAAARHAVEEYVRELERRAGYQHVYSPPLGKRELF-ELSGHLGYFADDMFPP 81

Query: 72 -SLQDDDGQWISLRY 85
            L         LR 
Sbjct: 82 MRLS--ADDEFVLRP 94


>gi|90580993|ref|ZP_01236794.1| prolyl-tRNA synthetase [Vibrio angustum S14]
 gi|90437871|gb|EAS63061.1| prolyl-tRNA synthetase [Vibrio angustum S14]
          Length = 571

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GPELLRFTDRHTRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E      D +     K  D        
Sbjct: 146 RFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLEYRP 194



 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 36/112 (32%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+     +     +     L  AGI   +F    +  G  
Sbjct: 461 DENGIIWPDALAPFHVSIVPMNMAKSEEVKEAAEKLYADLTAAGIEV-LFDDRKERPGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G      G ++ K+   G + +  + +  ++ + ++A
Sbjct: 520 FADHELLGVPHTIVIGNRSLENGEMEYKNRRTGIKEAVAVNDVVAFLKQKMA 571


>gi|223044387|ref|ZP_03614421.1| glycyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442256|gb|EEE48367.1| glycyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 463

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/218 (9%), Positives = 54/218 (24%), Gaps = 5/218 (2%)

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYN--SNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           + +K     E+        ++ +            K            +   ++      
Sbjct: 248 QWLKDLNINEENMRLRDHDADELSHYSNATTDIEYKFPFGWGELWGIASRTDFDLQKHSE 307

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
              E  K     +      Y    S    +   A          +   K   +  +    
Sbjct: 308 HSGEDFKYHDPETNEKYVPYCIEPSLGADRVTLAFLCDAYEEEGVEGSKDARTVMHFHPA 367

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
           + P     +       S+     + L +      +    S++ G + +  D    P  I 
Sbjct: 368 LAPYKAAVLPLSKKLSSEAIKIFEQL-SQSFS--IDFDESQSIGKRYRRQDEIGTPYCIT 424

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                     + ++D    +++   I   E++   +V 
Sbjct: 425 FDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAEKVK 462


>gi|158314451|ref|YP_001506959.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158109856|gb|ABW12053.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 428

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R+ + + IR      G+  + +P+L   +   +        +  +F  
Sbjct: 35  GLPYWLPDGAAVRHTLEEYIRTAERRAGYQHVYSPVLGKRELY-EISGHWSHYSDDMFPP 93

Query: 74  QDDDGQWISLRYDLTA 89
            D  G+ I LR  L  
Sbjct: 94  MDLGGEQIVLRPSLCP 109


>gi|329928815|ref|ZP_08282654.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328937458|gb|EGG33879.1| threonine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 645

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 1/103 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +   +      +   + L+ AGI  E  L  ++  G +++ A     P   
Sbjct: 544 WLSPVQVKVIPVSNAFEDYAKEVAEKLQFAGISVEPDL-RNEKLGYKIREAQLEKIPYMF 602

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           I G  E+S G + ++   +G   ++ +          +    +
Sbjct: 603 IVGENEKSAGAVSVRKRGEGDIGAQPLDEIILKLREEINTHVV 645



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/220 (11%), Positives = 58/220 (26%), Gaps = 9/220 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++R  +   I ++ E  G+  + TP+L   +   K     +   + +F  
Sbjct: 265 GLPIWLPNGAKLRRTLERYIVDMEERLGYQHVYTPVLGNVELY-KTSGHWEHYQEDMFPK 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEELVLRPMNCP-------HHMMVYKSDMHSYRDLPIRIAELGMQHRYEMSGALT- 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                 A T +        D ++    +     + +     +     ++         + 
Sbjct: 376 GLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKDFGIHDYRFRLSYRDPQDTEKY 435

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
                  +   +   + V+ L              G  L 
Sbjct: 436 FQNDEMWEMSQRMLREVVESLDMPFYEAEGEAAFYGPKLD 475


>gi|224370824|ref|YP_002604988.1| threonyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|259516390|sp|C0QAP1|SYT_DESAH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|223693541|gb|ACN16824.1| ThrS2 [Desulfobacterium autotrophicum HRM2]
          Length = 636

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 1/108 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +  + D     Q   + L + GIR ++ L + ++   +++ A     PL I
Sbjct: 530 WLAPVQAVVLPINDDLADHAQTVKKELESNGIRCDVDLRT-ESLKKKIREAQVNYVPLII 588

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             G  E+  G L ++ L     +   + +      A +    +    L
Sbjct: 589 TIGEKEKESGTLSVRTLDGKVRMGLSMADFIPPVLAHIRARQLDEDIL 636



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + + N +L   R+ +   G+   +TP++  S  L +     +   + +++ 
Sbjct: 257 GMPFFHAKGMEMWNELLAYWRDEHRAAGYVETKTPVM-MSRHLWEKSGHWENYRENMYTS 315

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 316 V-VDGEEYAIKPMNCPG 331


>gi|315604524|ref|ZP_07879587.1| proline--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313536|gb|EFU61590.1| proline--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 602

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 32/107 (29%), Gaps = 1/107 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                S         V +       +  +        L  AG+   +      + G + K
Sbjct: 488 DERGLSWPAQIAPFDVHVLATGKGEEVFATAASLGDELDVAGLDVLVDDRRKVSAGVKFK 547

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             +    P  ++ G    + G ++I+  A G+ +   ++   +    
Sbjct: 548 DFELVGIPFGLVVGRS-LADGKVEIRVRATGETIVVPVEEAAARLRE 593



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
               G        +R   +I D +R   +  G   +  P L  ++   K     +     
Sbjct: 36  RTAPGIYTWLPLGLRTLRKIEDIVREEMDAMGAQEVHFPGLIPAEPY-KATNRWEEYGPT 94

Query: 70  VFSLQDDDGQWISLRY 85
           +F L+D  G    L  
Sbjct: 95  LFKLEDRKGGDYLLAP 110


>gi|313609001|gb|EFR84741.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 344

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +   + +    A D      +  V L + +   +   +  K A    + I  +V FL 
Sbjct: 213 LSEIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKELKKVATPDQKSIADIVEFLE 271

Query: 246 IDLEKSMHEL 255
           + +EK+M  +
Sbjct: 272 VPIEKTMKSM 281


>gi|119963667|ref|YP_947320.1| prolyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|152074745|sp|A1R508|SYP_ARTAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119950526|gb|ABM09437.1| prolyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 603

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 29/99 (29%), Gaps = 1/99 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +  +    +     +  +  L  AG+          + G +  
Sbjct: 493 DDRGLVWPRSVAPADVHVVAVGRGDEIFEAAEKLSLELEAAGLDVIFDDRPKVSPGVKFG 552

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            A+    P  +  G      G+++IKD   G+  +  + 
Sbjct: 553 DAELVGVPTILAVG-RGLVDGVVEIKDRRSGEAENISVD 590



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        + +  ++ D IR      G   +  P L   E  ++  ++        +G+
Sbjct: 40  GIYTWLPLGLSVLRKVEDIIRQEMSAIGAQEVHFPALLPREPYEATNRWTE----YGEGL 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G    L  
Sbjct: 96  FRLQDRKGADYLLAP 110


>gi|118580173|ref|YP_901423.1| prolyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166980138|sp|A1APU5|SYP_PELPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118502883|gb|ABK99365.1| prolyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 576

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 24/79 (30%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R   +    +R      G   +  P ++ ++ L +        
Sbjct: 31  MIRKLAAGIYNYLPLGLRSIRKFEAIVREEMNRAGAIEMLMPSVQPAE-LWEESGRWSFY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
            K +   +D       +  
Sbjct: 90  GKELLRFRDRKDGEFCMGP 108



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 5/128 (3%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE----SSTNNIKEMGPVLITTMDHD 386
           G  Y     + +   +   G  IG +      ++ +         +      ++     D
Sbjct: 425 GATYLDADGKEQVIFMGCYGIGIGRTVAAAIEQNHDDNGIIFPLPLAPFHCSVVALNTKD 484

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              ++  +     L   GI         +  G + K  D    PL I+ G+   S G ++
Sbjct: 485 KGVMAAAEEMYFRLEQQGIEVLFDDRDER-PGVKFKDNDLIGIPLRIVVGSKGLSEGKVE 543

Query: 447 IKDLAKGK 454
           +K  A G+
Sbjct: 544 VKIRASGE 551


>gi|333028319|ref|ZP_08456383.1| putative threonyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332748171|gb|EGJ78612.1| putative threonyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 580

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 42/122 (34%), Gaps = 3/122 (2%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R    L    +       + PV    +      +   + +    R  G+R ++   S 
Sbjct: 460 IERFFAVLLEHYAGAMP-PWLAPVQAVGIPVGDAHVPYLKEFAAEARRKGLRVDVDASSD 518

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +    +++   ++  P  +I G  + + G +  +    G + +   K+    +   V + 
Sbjct: 519 R-MQKKIRNHQKQKTPFMVIVGDDDMNAGTVSFRH-RDGSQENGIPKDEAIAKLLDVVER 576

Query: 475 TI 476
            +
Sbjct: 577 RV 578


>gi|237745470|ref|ZP_04575950.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229376821|gb|EEO26912.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 650

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 42/152 (27%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I  ++   +R +Y + G+  ++ P +    SL +     D   + +F+ 
Sbjct: 276 GLIFWHPKGWTIWQQVEQYMRKVYRDNGYQEVKGPQI-LDRSLWEKSGHWDNYKENMFT- 333

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +++        +    N  +       Y         +              
Sbjct: 334 TESENRVYAIKPMNCPGHVQIYRSNLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGF 393

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                     + ++        + +     D+
Sbjct: 394 TQDDGHIFCTEDQILDECVAFTDLLKKVYKDF 425



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    ++         +   + ++ AG+R E  L  ++    +++       P  +
Sbjct: 550 WLAPVQAVVLNISDAQAEYAKSVVETMKKAGLRVEADL-RNEKITYKIRDHSVNKVPYLL 608

Query: 434 IQGTGERSRGMLQIK 448
           + G  E++   + ++
Sbjct: 609 VVGDKEKNGNTVAVR 623


>gi|241204765|ref|YP_002975861.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858655|gb|ACS56322.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 661

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 77/257 (29%), Gaps = 19/257 (7%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV-----I 275
           D++  F     + +E + I    LS+  +    E+   +        G ++L       +
Sbjct: 389 DDAHIFCTDEQMAAECLKINDLILSVYKDFGFDEVTIKLSTRPDKRVGSDDLWDRAESVM 448

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             ++      SN IK       G  Y     +E  L   +  E Q            R+ 
Sbjct: 449 MGVLETIQQQSNNIKTGILPGEGAFYG--PKFEYTLKDAIGREWQCGTTQVDFNLPERFG 506

Query: 336 GLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                   +            G     + +     + +    + P+ +      S++ + 
Sbjct: 507 AFYIDSNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATITSEADAY 566

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR----NCPLAIIQGTGERSRGMLQIK 448
                + LR AG+  E    + K     + Y  R       P+ I+ G  E     + I+
Sbjct: 567 GLEVAEALREAGLNVETDFRNEK-----INYKVREHSVTKVPVIIVCGRKEAEERTVNIR 621

Query: 449 DLAKGKELSREIKNNES 465
            L    ++S  +     
Sbjct: 622 RLGSQDQVSMGLDAAVE 638


>gi|328464763|gb|EGF36081.1| threonyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 644

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 500 TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNNEAHGEY 559

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L   G R E+    ++  G +++ +  +  P  ++ G  E   G + ++    
Sbjct: 560 AEKVRAELAKRGFRVEVD-DRNEKMGYKIRESQTQKVPYTLVLGDEEMKSGKVNLRRYGT 618

Query: 453 GKELSREIKNNESWREA 469
            +E+S+ + +  +  +A
Sbjct: 619 DEEISKSLDDFINEIDA 635



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYRDDMF 316

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 317 PPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 376

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R           V    +T  A++  ++ +  +   I    + +   + K  D       
Sbjct: 377 REMTLNDGHTFVVLDQVQTEFAKILKLIMEVYKDFDITDYYFRLSYRDPKNTDKYFANDE 436

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 437 MWEKSQKM 444


>gi|262402773|ref|ZP_06079334.1| prolyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351555|gb|EEZ00688.1| prolyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 571

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 46/167 (27%), Gaps = 4/167 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVETIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTA-PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
              +    D   +   L    TA  +   +  N                 +       RF
Sbjct: 90  GPELLRFTDRHERPFVLSP--TAEEVITALVRNEVNSYKQLPLNLYQIQTKFRDERRPRF 147

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
                 +   + + +   D +      D + A   K  D        
Sbjct: 148 GVMRAREFSMMDAYSFDIDKDGLQKSYDAMHAAYCKAFDRMGLDYRP 194



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI         +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQEAAEKLYAELTAAGIEVLFDDRKER-PGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+  +G++ +  +++   + +A++A
Sbjct: 540 DEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 571


>gi|261212071|ref|ZP_05926357.1| prolyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838679|gb|EEX65330.1| prolyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 546

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 46/167 (27%), Gaps = 4/167 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +N G      P+++  + L +     ++ 
Sbjct: 6   MIRKLASGLYTWLPTGLRVLRKVETIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 64

Query: 67  NKGVFSLQDDDGQWISLRYDLTA-PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
              +    D   +   L    TA  +   +  N                 +       RF
Sbjct: 65  GPELLRFTDRHERPFVLSP--TAEEVITALVRNEVNSYKQLPLNLYQIQTKFRDERRPRF 122

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
                 +   + + +   D +      D + A   K  D        
Sbjct: 123 GVMRAREFSMMDAYSFDIDKDGLQKSYDAMHAAYCKAFDRMGLDYRP 169



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 456 MNMHKSERVQEAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 514

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+  +G++ +  +++   + +A++A
Sbjct: 515 DEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 546


>gi|225447618|ref|XP_002270988.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 670

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ I DS + I+  +G+D + TP +  +D L K     D   + ++S 
Sbjct: 294 GLVFWHPKGAIVRHIIEDSWKKIHIEHGYDLLYTPHVARAD-LWKTSGHLDFYRENMYSQ 352

Query: 74  QDDDGQWISLRYDLTA 89
              + +   LR     
Sbjct: 353 ITIEDELYQLRPMNCP 368



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 2/94 (2%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +      L      T  L+  GIRAE+  G        ++ ++++  PL  + G  E  
Sbjct: 577 VLPVTDTQLEYCNEVTNKLKANGIRAEVCHGER--LPKLIRNSEKQRIPLMAVVGPKEVE 634

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
              + ++    G+  +  +++  S  ++     T
Sbjct: 635 TQTVTVRSRFGGELGTMIVEDFISRTKSATENRT 668


>gi|25013040|gb|AAN71609.1| RH56418p [Drosophila melanogaster]
 gi|220950596|gb|ACL87841.1| Aats-thr-PB [synthetic construct]
          Length = 711

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 64/221 (28%), Gaps = 21/221 (9%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL   ++  +    + N   +      G   + G   +  +   +    Q   +      
Sbjct: 498 ELEQWNDAEKALAESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQLDFQL 557

Query: 331 GGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
             R++       G+           +G    ++A+ +   +      + P  +  +    
Sbjct: 558 PIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQVMVVPVGP 617

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                 Q     L  AG  +E    +      +++ A        ++ G  ERS   + +
Sbjct: 618 AYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNV 677

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           +                           + ++EL++ ++KI
Sbjct: 678 R------------------TRDNKVHGEVSVAELITKLQKI 700



 Score = 38.3 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++  I+  Y   GF  + +P + Y+  L           + +FS + + 
Sbjct: 335 FQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYAENMFSFEAEK 393

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 394 -EKFALKPMNCPG 405


>gi|87309081|ref|ZP_01091218.1| threonyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87288072|gb|EAQ79969.1| threonyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 668

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 43/139 (30%), Gaps = 3/139 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + V ++    +         V +  +    +     +   
Sbjct: 512 NQMHRPVMIHRAPFGSLERFMGVLIEHFAGAFPLWLAPEQVRVLVVSQKFE--EYARKVE 569

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+ AG R +      +  G++++ A     P   + G  E     + ++D   G   S
Sbjct: 570 AELKQAGFRVKGDY-RPEKIGSKIRDAQLELIPYMFVIGGREMETESVAVRDRIDGDLGS 628

Query: 458 REIKNNESWREARVAQITI 476
            ++       +  VA+  +
Sbjct: 629 MKVAEAIDKLKQEVAERKV 647


>gi|227524682|ref|ZP_03954731.1| threonine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
 gi|227088166|gb|EEI23478.1| threonine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
          Length = 658

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 52/186 (27%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G++ + TP+L   D   K     +   + +F  
Sbjct: 274 GLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPVLANLDLY-KQSGHWEHYREDMFPP 332

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 333 MDMGDGEELELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 392

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +     +  +M +      I    + +   + +  +   +   + 
Sbjct: 393 MTLNDGHTFVALDQIQEEFQNILKLMVEVYHDFDINDYTFRLSYRDPENTEKYFDDDEMW 452

Query: 186 GDDKLN 191
              +  
Sbjct: 453 NRAQSM 458



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/242 (11%), Positives = 72/242 (29%), Gaps = 5/242 (2%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + I  ++  +  D + + +      +     EK F++  + +          + + +   
Sbjct: 412 QNILKLMVEVYHDFDINDYTFRLSYRDPENTEKYFDDDEMWNRAQSMLKGAMDELGLDYV 471

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD-GLVSRFKGQNVPAT---G 350
              G   + G   +      + NE+    +        R+D   V     Q+ P     G
Sbjct: 472 EAEGEAAFYGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYVGEDGKQHRPVMIHRG 531

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
               + R +  L  +             +              +     LR   IR+ + 
Sbjct: 532 LVSTMERFVAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHGDYAKQINDQLRRLKIRSSVD 591

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              ++  G  ++ A     P  ++ G  E +   + ++   + +  +  +       +  
Sbjct: 592 -TRAEKMGYLIRDAQTHKIPYTLVVGDEEVNGKSVSVRRYGEKETQAESLDTFVDEIQKD 650

Query: 471 VA 472
           +A
Sbjct: 651 IA 652


>gi|229582573|ref|YP_002840972.1| Glycine--tRNA ligase [Sulfolobus islandicus Y.N.15.51]
 gi|228013289|gb|ACP49050.1| Glycine--tRNA ligase [Sulfolobus islandicus Y.N.15.51]
          Length = 473

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 1/86 (1%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V I ++ H  + ++  +     LR+ G      L        Q   AD    PL +   +
Sbjct: 375 VGIASIHHSDEYINVAEKVDLTLRSLGY-VTFKLFEKGKIEAQYAKADTLGIPLVVTVDS 433

Query: 438 GERSRGMLQIKDLAKGKELSREIKNN 463
                  + I++     ++   I+  
Sbjct: 434 KTLDENTVTIRNRDTKAQIRVNIREI 459


>gi|315282482|ref|ZP_07870886.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613866|gb|EFR87606.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 640

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/330 (9%), Positives = 90/330 (27%), Gaps = 7/330 (2%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M   + +       +   I  N+      +  +I   G     
Sbjct: 305 TSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRY 364

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L  + ++    L    + +   +  +         L   +   +  +      + 
Sbjct: 365 EMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIKDYSFRLSYRD 424

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                +        EK  + L    + +    + +     ++     L+           
Sbjct: 425 PKNTEKYFDDDAMWEKAQSMLKSAMDEMGMDYFEAEG--EAAFYGPKLDVQVKTAIGKEE 482

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               +           +   G                +        +   ++  + +   
Sbjct: 483 TLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTME---RFVAYLIEEYKGAFPT 539

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 + +  ++ D+  L+  +     L+ AG+R+E+    ++  G +++ A  +  P 
Sbjct: 540 WLAPVQMELIPVNADA-HLNYAKGVQDKLQRAGLRSEVD-DRNEKLGYKIREAQTKKIPY 597

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           A++ G  E   G + ++        + ++ 
Sbjct: 598 ALVLGDQEVEAGSVNVRRYGSKDSETMDLD 627



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 8/105 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              D + + LR             +         +YR  P+   E
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAE 357


>gi|291443408|ref|ZP_06582798.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291346355|gb|EFE73259.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 658

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/451 (11%), Positives = 114/451 (25%), Gaps = 52/451 (11%)

Query: 49  LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAE---NFDTIVF 104
            LE+ +   K    +      +FS  D+ G  +++        + R   E          
Sbjct: 248 HLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKG--GVIRRAMEDYSRRRHEEE 305

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
                      + +         +    +       +  D  +  M       +   R  
Sbjct: 306 GYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGR 365

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
            +  +  R    G + +    G      R       D       + +   L     D + 
Sbjct: 366 SYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-----DRTL 420

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV---RK 281
            F           D  +   + D EK +       + T   ++   +  +          
Sbjct: 421 TFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATATLQQVAEKQGLPLVPDPGGAA 480

Query: 282 SGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                  ++    I R  +  T    +     F +            V            
Sbjct: 481 FYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQRPVM----------- 529

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                +    F        V L+    +      + PV    +      +   Q +    
Sbjct: 530 -----IHRALFGSIERFFAVLLEHYAGAFPVW--LAPVQAVGIPIGDAHIPYLQEFAAKA 582

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R  G+R ++   S +    +++   +   P  II G  + + G +  +    G + +   
Sbjct: 583 RKQGLRVDVDASSDR-MQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRY-RDGSQENG-- 638

Query: 461 KNNESWREARVAQITIPISELVSTVKKILQE 491
                          IP+ E ++ + K +++
Sbjct: 639 ---------------IPVDEAIAKIAKAVED 654


>gi|260437371|ref|ZP_05791187.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292810283|gb|EFF69488.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 651

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 43/150 (28%), Gaps = 3/150 (2%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    + +   +  T        L   ++              V +  +          
Sbjct: 505 IDEKGDKVRPYIIHRTSMGCYERTLAWLIEKYAGMFPTWLCPEQVRVLPIS--DKYADYA 562

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 +R   I  E    + K  G +++ A     P  ++ G  E+  G++ ++    G
Sbjct: 563 DSVAAKIREHKIYVEADHRAEK-LGYKIRDARLARVPYILVVGEKEQETGVVSVRSRFLG 621

Query: 454 KELSREIKNNESWREARVAQITIPISELVS 483
            E  + ++   +     +    I   E+  
Sbjct: 622 DEGQKPLEQFINDICEEIRTKAIRKIEVTE 651



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 37/115 (32%), Gaps = 4/115 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RI   +   I +  ++ G+   +TPL+  SD   K     D    G+F L
Sbjct: 260 GLPLIMPKGERIIRTLQRWIEDEEDSRGYVRTKTPLMAKSDLY-KISGHWDHYKDGMFVL 318

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            D   D +  +LR  +T P   YV +                         G   
Sbjct: 319 GDEEKDKEVFALRP-MTCPFQYYVYKASQKSYRDLPLRYGETSTLFRNEDSGEMH 372


>gi|260103159|ref|ZP_05753396.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083018|gb|EEW67138.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 644

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 500 TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNNEAHGEY 559

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L   G R E+    ++  G +++ +  +  P  ++ G  E   G + ++    
Sbjct: 560 AEKVRAELAKRGFRVEVD-DRNEKMGYKIRESQTQKVPYTLVLGDEEMKSGKVNLRRYGT 618

Query: 453 GKELSREIKNNESWREA 469
            +E+S+ + +  +  +A
Sbjct: 619 DEEISKSLDDFINEIDA 635



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYRDDMF 316

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 317 PPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 376

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R           V    +T  A++  ++ +  +   I    + +   + K  D       
Sbjct: 377 REMTLNDGHTFVVLDQVQTEFAKILKLIMEVYKDFDITDYYFRLSYRDPKNTDKYFANDE 436

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 437 MWEKSQKM 444


>gi|222100818|ref|YP_002535386.1| Threonyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254783544|sp|B9KAN7|SYT_THENN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221573208|gb|ACM24020.1| Threonyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 640

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + + N +++  R ++   G+  I TPL+   + L +     D   + ++  
Sbjct: 260 GMPFFLPRGVIVLNELMNFSRELHRERGYQEIFTPLIMN-EQLWRISGHWDHYAENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
            +   +  +++      
Sbjct: 318 IEKGEERYAVKPMNCPG 334



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 19/123 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +    ML   G R  +     +  G +++ A  +  P  +
Sbjct: 533 WIAPVQVAVIPISDKHSEGAKKVATMLSREGFRVFLD-DRRETLGYRIRQAQIQKIPYMV 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  E   G L ++    GKE+                   + +   + T+KK +++ K
Sbjct: 592 VLGDRELESGKLSVRT-RSGKEI-----------------KDVEMDHFIDTLKKEVRDRK 633

Query: 494 EEI 496
            E+
Sbjct: 634 LEL 636


>gi|161507864|ref|YP_001577828.1| theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048343|sp|A8YWE1|SYT_LACH4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160348853|gb|ABX27527.1| Theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 644

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 500 TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNNEAHGEY 559

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L   G R E+    ++  G +++ +  +  P  ++ G  E   G + ++    
Sbjct: 560 AEKVRAELAKRGFRVEVD-DRNEKMGYKIRESQTQKVPYTLVLGDEEMKSGKVNLRRYGT 618

Query: 453 GKELSREIKNNESWREA 469
            +E+S+ + +  +  +A
Sbjct: 619 DEEISKSLDDFINEIDA 635



 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 260 GLPYWMPKGATIRRAVERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYRDDMF 316

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 317 PPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 376

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                +T  A++  ++ +  +   I    + +   + K  D       
Sbjct: 377 REMTLNDGHTFVALDQVQTEFAKILKLIMEVYKDFDITDYYFRLSYRDPKNTDKYFANDE 436

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 437 MWEKSQKM 444


>gi|118595089|ref|ZP_01552436.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium
           HTCC2181]
 gi|118440867|gb|EAV47494.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium
           HTCC2181]
          Length = 635

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++   P G      K   +   + D +R ++++YG+  I+TP +       K     +  
Sbjct: 255 MQDNAP-GMVFWHPKGWSLWLAVEDYMRQMFKDYGYKEIKTPTIIDKSLWEKS-GHWENY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+   ++ +  +++                +    P R    G   RNE  G   
Sbjct: 313 QDNMFTTASEN-RVYAVKPMNCPGHVEVFNNTLHSYRDLPLRLAEFGSCHRNEPSGALH 370



 Score = 39.8 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 28/85 (32%), Gaps = 10/85 (11%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NFGNQ-LKYADRRNC 429
            + P+ +  ++         +    + +  GIR E  L + K         ++       
Sbjct: 535 WLAPIQVVLLNISDAQKEYAKTLETIFKEKGIRCESDLRNEKITYKIREHSMQR-----I 589

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGK 454
           P  ++ G  E     + ++    G+
Sbjct: 590 PYMVVLGDREMQEKQVTVRT-QSGE 613


>gi|300123658|emb|CBK24930.2| unnamed protein product [Blastocystis hominis]
          Length = 457

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 1/71 (1%)

Query: 15 FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
                   R+ + +   I    E  G   ++ P+++  +   K     D+  K +++L+
Sbjct: 1  MYSFLPLGQRVLDEVEKIIDRNLETIGAQKMQMPIVQNLNRWMKS-GRRDQIGKELYTLK 59

Query: 75 DDDGQWISLRY 85
          D  GQ + L  
Sbjct: 60 DRKGQELCLSP 70


>gi|108562547|ref|YP_626863.1| threonyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123247050|sp|Q1CV33|SYT_HELPH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|107836320|gb|ABF84189.1| threonyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 612

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 84/263 (31%), Gaps = 9/263 (3%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F     + SE +  ++ F    ++         +    A   G +E+   +
Sbjct: 354 EFTQDDAHIFCSFEQIQSE-VSAILDFTHKIMQAFDFSYEMELSTRPAKSIGDDEVWEKA 412

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG--GGRY 334
               K     +RI        G  Y      +       +  K +               
Sbjct: 413 TNALKEALKEHRIDYKIDEGGGAFYGPKIDIKIT---DALRRKWQCGTIQVDMNLPERFK 469

Query: 335 DGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
               +       P       +G     +A+ S     N    + P  I  +  + +    
Sbjct: 470 LAFTNERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVF 529

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + L+   I  E+   +  +   +++ A+++  P+ ++ G  E    +L I+D  K
Sbjct: 530 ALKLKEELKKRDIFVEVLDKND-SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588

Query: 453 GKELSREIKNNESWREARVAQIT 475
             +    +K   +  E+++ +++
Sbjct: 589 QAQYKMPLKEFLNMVESKMQEVS 611



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSQALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDEVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E+   E
Sbjct: 463 NLPERFKLAFTNERNHAE 480


>gi|55379994|ref|YP_137844.1| threonyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|55232719|gb|AAV48138.1| threonyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 672

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 66/241 (27%), Gaps = 6/241 (2%)

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
              +DI++  L         +     + ++ G++ + +     E V           +  
Sbjct: 428 LATVDIILDTLDTFNLDYTVQFATRPEKSVGGDEIWEKAESQLESV--LEEQDIDYVVEE 485

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
                        +E  LG        +            Y G  +      +       
Sbjct: 486 GDGAFYGPKIDFAFEDALGRHWDGPTVQLDFNMPERFDLSYTGEDNEEHRPVMIHRALYG 545

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
              R  + L    +       + P  I  +    D+++  +     L     R  +    
Sbjct: 546 SYERFFMVLTEHYNGKFP-PWLAPEQIRLLPVSDDNITYCEEIQDELDD--FRVTIE-DR 601

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           S   G +++ A     P   + G  E   G + ++D  + +E   +I       E  V Q
Sbjct: 602 SWTVGKKIQQAHDDRVPYMCVIGDNEEEAGTISVRDRKEREEKDIDIAEFRDHLETEVEQ 661

Query: 474 I 474
            
Sbjct: 662 Q 662



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 51/164 (31%), Gaps = 8/164 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +I N + D +  +  + G+D +ETP +  ++ L K     +     +F L
Sbjct: 292 GLPLYEPNGKKILNELSDYVAGLNRDAGYDEVETPHVFRTE-LWKKSGHYENYVDDMF-L 349

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ-----F 128
            D + +   L+       A    +N  +                 K   G          
Sbjct: 350 LDVNDEEYGLKPMNCPGHATIFEQNSWSY-RDLPVRYFEDGKVYRKEQRGELSGLSRTWA 408

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
              D  ++    +  + E+   +   L+ +     DY +    R
Sbjct: 409 FTIDDGHLFVRPDQIEEEVLATVDIILDTLDTFNLDYTVQFATR 452


>gi|83746821|ref|ZP_00943869.1| Prolyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83726590|gb|EAP73720.1| Prolyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 626

 Score = 56.0 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R   ++   +R      G   +  P+++  + L +     D+ 
Sbjct: 83  MIKKLGAGIYTYMPVGLRAIRKVEQIVREEMNAAGAVEMLMPVVQPGE-LWQETGRWDKM 141

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
            + +  ++D   + + ++    ++   +AR    ++  +       +             
Sbjct: 142 GEELMRVKDRHERDLVIQPTSEEVVTDIARTEIRSYKQMPVNFYQIQTKFRDERRPRFGI 201

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D      + +  +M        +  G
Sbjct: 202 MRGREFTMKDAYSFDRDVEGMKVSYQKMFDAYTRIFQRFG 241



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 3/87 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  + +D      ++       L  AGI   +     +  G  
Sbjct: 515 DARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAELAAAGIDVILD-DRGERPGVM 573

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQI 447
               +    P  ++ G      G L++
Sbjct: 574 FADWELIGVPFRVVVGERGLKEGKLEL 600


>gi|319653813|ref|ZP_08007907.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317394349|gb|EFV75093.1| threonyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 399

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/239 (12%), Positives = 64/239 (26%), Gaps = 6/239 (2%)

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           A+    +ID ++  +         +    +        G  E+   +E   +S   +  +
Sbjct: 154 ADQIEAEIDKILVLIDEFYSHFGFDYKVELSTRPEEYMGSQEMWERAEGALESVLKNKGV 213

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNV 346
                   G  Y     +  +       +                              +
Sbjct: 214 NYQINPGDGAFYGPKIDFHILDSLGRSWQCGTIQLDFQMPQKFNCAYVGEDNKLHLPIMI 273

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++                I  +       + Y      L  AGIR
Sbjct: 274 HRAIFGSVERFMAILIEHFAGDFPLWLSPVQAKIIPISDSHAEYADYVK--SQLEEAGIR 331

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           AE    + K  G +++ A ++  P  ++ G  E  +  L ++   +G      IK+   
Sbjct: 332 AEADFRTEK-MGLKIREAAKQKVPYMLVIGDKEMEQQSLSLRKRKEGNIGVMSIKDVIE 389



 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +RN +    R  ++  G+  I+TP++   + L +     +  ++ ++  
Sbjct: 26  GMPFFLPNGMVMRNELESYWRRKHQRAGYQEIKTPIMMKQE-LWEQSGHWNHYHENMY-F 83

Query: 74  QDDDGQWISLRYDLTAP 90
            + D Q  +++      
Sbjct: 84  SNVDEQNYAIKPMNCPG 100


>gi|227510530|ref|ZP_03940579.1| threonine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190182|gb|EEI70249.1| threonine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 658

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 52/186 (27%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G++ + TP+L   D   K     +   + +F  
Sbjct: 274 GLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPVLANLDLY-KQSGHWEHYREDMFPP 332

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 333 MDMGDGEELELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 392

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +     +  +M +      I    + +   + +  +   +   + 
Sbjct: 393 MTLNDGHTFVALDQIQEEFQNILKLMVEVYHDFDINDYTFRLSYRDPENTEKYFDDDEMW 452

Query: 186 GDDKLN 191
              +  
Sbjct: 453 NRAQSM 458



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/261 (11%), Positives = 76/261 (29%), Gaps = 23/261 (8%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + I  ++  +  D + + +      +     EK F++  + +          + + +   
Sbjct: 412 QNILKLMVEVYHDFDINDYTFRLSYRDPENTEKYFDDDEMWNRAQSMLKGAMDELGLDYV 471

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD-GLVSRFKGQNVPAT---G 350
              G   + G   +      + NE+    +        R+D   V     Q+ P     G
Sbjct: 472 EAEGEAAFYGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYVGEDGKQHRPVMIHRG 531

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
               + R +  L  +             +              +     LR   IR+ + 
Sbjct: 532 LVSTMERFVAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHGDYAKQINDQLRRLKIRSSVD 591

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              ++  G  ++ A     P  ++ G  E +   + ++    G++ +             
Sbjct: 592 -TRAEKMGYLIRDAQTHKIPYTLVVGDEEVNGKSVSVR--RYGEKET------------- 635

Query: 471 VAQITIPISELVSTVKKILQE 491
             Q    +   V  ++K +  
Sbjct: 636 --QAE-SLDAFVDEIQKDIAS 653


>gi|157803870|ref|YP_001492419.1| prolyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166980151|sp|A8EZ51|SYP_RICCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157785133|gb|ABV73634.1| prolyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 438

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/469 (8%), Positives = 124/469 (26%), Gaps = 67/469 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        ++I   I + +R+     G   +  P ++ +    +        
Sbjct: 31  MIRQQAAGIYTWLPLGLKILKNIENIVRSNMNKAGALEVLMPCIQPAHLWMESG------ 84

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                  ++   + +                                 F++       F 
Sbjct: 85  -----RFENYGKEML--------------------------------KFQDRHDNTLLFG 107

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
              +  + ++      +  ++   +         +       +  R+ L        ++ 
Sbjct: 108 PTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINE 167

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++ +     + +         +   + L        + +   G NL++E   I+    + 
Sbjct: 168 ENAVKTYNQMFKTY-------INTFRDLGVFAIPVIADNGPIGGNLSNE-FHIIAE--TG 217

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           +      + +++ K     +    E+        +    +        I        G +
Sbjct: 218 ESTLYYDKRFKIFKDNPDID--VEEIKSWYAASEEKHDVNKLPISEQEITSSKGIEVGHI 275

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +            +  V   ++       G ++  +  +       +  + +        
Sbjct: 276 FYI--------GSKYSVNMNALINDEH--GKLTPVEMSSYGIGISRLVAAIIEANCDEKG 325

Query: 367 SSTNNIKEMGPVLITTMDH-DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               +      V +  ++  DS      +   + L    I   ++  +    G++    D
Sbjct: 326 IIWPSSVAPFKVSLINLNIHDSKCTELAERAYKELSAQNIEV-LYDDTDVRPGSKFATHD 384

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
               P  II G  + +  +++ K+   G     +I N +    + + Q 
Sbjct: 385 LIGSPYQIIIGPKKAANNIVEFKNRKSGVIEDIKIGNLKKLIMSCLRQQ 433


>gi|315586098|gb|ADU40479.1| threonine--tRNA ligase [Helicobacter pylori 35A]
 gi|317179509|dbj|BAJ57297.1| threonyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 612

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 50/120 (41%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +  +      + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHAFALKLKEALKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEHNHAE 480


>gi|257094575|ref|YP_003168216.1| prolyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047099|gb|ACV36287.1| prolyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 574

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/107 (8%), Positives = 36/107 (33%), Gaps = 4/107 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R   +  G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIKRLAGGIYTWMPIGLRVMRKVERIVREEMDRAGAIELSMPAVQPAE-LWQESGRWEKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR 110
              +   +D   +   +     ++   + R   +++  +       +
Sbjct: 90  GPELLRCKDRHQRDFVIGPTHEEVITDVVRKEVKSYRQLPLHFYQVQ 136


>gi|328957059|ref|YP_004374445.1| threonine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673383|gb|AEB29429.1| threonine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 645

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 9/122 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E+  G      K   IR  I   I +   + G+  + TP++   +   K     D  
Sbjct: 255 ISPEVGSGLPFWLPKGATIRRTIERYIVDREISLGYQHVYTPIMADVNLY-KTSGHWDHY 313

Query: 67  NKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           ++ +F   D   G+ + LR             +         +YR  P+   E     R+
Sbjct: 314 HEDMFPPMDMGDGEMLVLRPMNCP-------HHMMVYKNDVHSYRELPIRIAELGQMHRY 366

Query: 126 RQ 127
            +
Sbjct: 367 EK 368



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/105 (10%), Positives = 38/105 (36%), Gaps = 4/105 (3%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             +   ++  + +           I  ++ D           + L + G+R ++    ++
Sbjct: 527 RFVAYLIEEYKGAFPTWLAPVQATIIPVNLD-MHTDYAYEIKKQLESIGMRVDVD-ERNE 584

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
             G +++ +  +  P  ++ G  E     + ++    G++ +  I
Sbjct: 585 KMGYKIRASQTQKIPYQLVVGDSEVQDNTVAVR--KYGEKATETI 627


>gi|239939977|ref|ZP_04691914.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239986461|ref|ZP_04707125.1| threonyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
          Length = 653

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/451 (11%), Positives = 114/451 (25%), Gaps = 52/451 (11%)

Query: 49  LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAE---NFDTIVF 104
            LE+ +   K    +      +FS  D+ G  +++        + R   E          
Sbjct: 243 HLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKG--GVIRRAMEDYSRRRHEEE 300

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
                      + +         +    +       +  D  +  M       +   R  
Sbjct: 301 GYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGR 360

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
            +  +  R    G + +    G      R       D       + +   L     D + 
Sbjct: 361 SYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-----DRTL 415

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV---RK 281
            F           D  +   + D EK +       + T   ++   +  +          
Sbjct: 416 TFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATATLQQVAEKQGLPLVPDPGGAA 475

Query: 282 SGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                  ++    I R  +  T    +     F +            V            
Sbjct: 476 FYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGSKQRPVM----------- 524

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                +    F        V L+    +      + PV    +      +   Q +    
Sbjct: 525 -----IHRALFGSIERFFAVLLEHYAGAFPVW--LAPVQAVGIPIGDAHIPYLQEFAAKA 577

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R  G+R ++   S +    +++   +   P  II G  + + G +  +    G + +   
Sbjct: 578 RKQGLRVDVDASSDR-MQKKIRNQQKNKVPFMIIAGDEDMANGAVSFRY-RDGSQENG-- 633

Query: 461 KNNESWREARVAQITIPISELVSTVKKILQE 491
                          IP+ E ++ + K +++
Sbjct: 634 ---------------IPVDEAIAKIAKAVED 649


>gi|226945724|ref|YP_002800797.1| prolyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511575|sp|C1DRG4|SYP_AZOVD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226720651|gb|ACO79822.1| prolyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 571

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R   +    +R   +  G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPLGLRALRKAEAIVREEMDKAGALEVLMPAIQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   +   +     ++   LAR    ++  +       +  
Sbjct: 90  GPELLRIRDRHAREFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTK 138



 Score = 40.2 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 34/112 (30%), Gaps = 2/112 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSK-NFGNQ 420
                          + +  M ++S ++ +        L  AG    +     K + G +
Sbjct: 459 DERGILWPQALAPFQIALVPMKYESAAVREATDRLYAELVAAGYEVLLDDRDKKTSPGVK 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+      + G L+ K   + +  +    +  ++   R+ 
Sbjct: 519 FADMELIGIPHRIVVSERGLAEGTLEYKGRRETEVQAIPAADLITFLGNRIG 570


>gi|254491952|ref|ZP_05105130.1| prolyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462767|gb|EEF79038.1| prolyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 569

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 41/157 (26%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            L  G        +++  +    IR+  +  G   +  P ++ S+ L +     ++    
Sbjct: 34  RLASGLYTWLPMGLKVLRKTEAIIRDEMDKAGAQEVLMPSVQPSE-LWQESQRWEKYGPE 92

Query: 70  VFSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +  + D   +             DL     R   +           +R     R      
Sbjct: 93  LLRITDRHQREFCYGPTHEEVITDLVRQEIRSYKQLPINFYQIQTKFRDEIRPRFGLMRA 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F            +S +    +M    +     +G
Sbjct: 153 REFLMKDAYSFHLDHASLQQTYDDMFAAYSRIFSRIG 189



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  ++         K +   Q L+ AGI   +        G  
Sbjct: 459 DDRGIIWPEAIAPYQVVLVPVNAHKSVRVKQKAEEIYQQLQAAGIDVLLD-DRGLRPGVA 517

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  +I G      GM++ K    G+     I++     + +++
Sbjct: 518 FADMELIGIPHRLILGERGLDNGMIEYKSRRTGEGDEFPIESVIETIKQKLS 569


>gi|254167523|ref|ZP_04874375.1| glycyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623786|gb|EDY36349.1| glycyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 549

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/407 (12%), Positives = 106/407 (26%), Gaps = 14/407 (3%)

Query: 83  LRYDLTAP--LARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
           LR + TA      +           P    +IG  FRNE        +  + ++  +   
Sbjct: 149 LRPE-TAQGIFVNFPIMYRLNREKLPLGVAQIGKGFRNEISPRQGLLRLREFNMAEIELF 207

Query: 140 AETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
            +  D ++   + D    +  +  +         +   ++     +   K+ + L  L  
Sbjct: 208 VDPYDEDILNDLEDVNLHLLTREGEELKLSTKEAVERNLMNAHIAYYMAKIVKFLDTL-G 266

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
           ID       Q  K  L     D        ++   E +  +      DL++ M      +
Sbjct: 267 IDLNRVRFRQHFKEELAHYSRDTWDCEILLSSGWVE-VTGIADRGDYDLKRHMTYSGRDL 325

Query: 260 KGTIAGEKGFNELVVIS-ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVM-- 316
                 ++     +      +   G    +       +     Y     E  +    +  
Sbjct: 326 TAIRRFKEPKKIKIKKLRARMEILGPMFKKDAKKIAEILESMEYVDGNIEIEIDGKNVKI 385

Query: 317 --NEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
             +  +  +    +GG      ++    G +                             
Sbjct: 386 PRDAYEIKIEEEVIGGERFVPHVIEPSFGIDRILYAVLEHSFYEREDTGYKVLKLKPKIA 445

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V I  +       +  +     +R  GI +  +   S + G +   AD    P  I 
Sbjct: 446 PIKVAIFPLMAKDGLDTVARDVLNKIREGGITS--YYDDSGSIGRRYARADEIGVPFCIT 503

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                     + I++    K+    I       E  V +  +    L
Sbjct: 504 VDYESLKDNTVTIRERDSAKQKRVRIDAIPKILEDLVDER-VDFESL 549


>gi|328955488|ref|YP_004372821.1| prolyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455812|gb|AEB07006.1| prolyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 576

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 2/110 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V I  +D      ++        L   GI   +   + +  G + 
Sbjct: 459 DEAGIIWPVSVAPYEVSIVLLDTKLQACVAAGDRLAFELSAGGIDVVLDDRAER-PGVKF 517

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
              D    P  II G    + G ++IKD A G+ +   + +  ++   R+
Sbjct: 518 ADNDLMGFPYQIIVGKRGIAAGTVEIKDRATGERVDVALDDASNYAVERI 567



 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G         R   +I + +R+  +  G      P+L  ++ L +     D  
Sbjct: 35  MIRKMASGIYSYLPLAWRSLKKIEEIVRDEMDAIGAQECLLPILTDAE-LWRLSGRWDAY 93

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  + D   +  +L  
Sbjct: 94  GPELMRIVDRHQRQFALGP 112


>gi|320011858|gb|ADW06708.1| threonyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 658

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/458 (11%), Positives = 115/458 (25%), Gaps = 66/458 (14%)

Query: 49  LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL-RYDLTAPLARYVAE---NFDTIVF 104
            LE+ +   K    +      +FS  D+ G  +++        + R   E          
Sbjct: 248 HLEFLEEAAKRDHRKLGNELDLFSFPDEIGPGLAVFHPKG--GVIRRAMEDYSRRRHEEE 305

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
                      + +         +    +       +  D  +  M       +   R  
Sbjct: 306 GYEFVYSPHATKGKLFEKSGHLDWYADGMYPPMQLDDGVDYYLKPMNCPMHNLIFDARGR 365

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSG 224
            +  +  R    G + +    G      R       D       + +   L     D + 
Sbjct: 366 SYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDAHIYCTKEQMAEEL-----DRTL 420

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV----- 279
            F           D  +   + D EK        V      E+    L  ++E       
Sbjct: 421 TFVLNLLRDYGLTDFYLELSTKDPEK-------FVGSDEIWEEATETLRQVAEKQGLPLV 473

Query: 280 -----RKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
                         ++    I R  +  T    +     F +            V     
Sbjct: 474 PDPGGAAFYGPKISVQCKDAIGRTWQMSTVQLDFNLPERFDLEYTGPDGTKQRPVM---- 529

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                       +    F        V L+    +      + PV    +      +   
Sbjct: 530 ------------IHRALFGSIERFFAVLLEHYAGAFPVW--LAPVQAVGIPIGDTHIPYL 575

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           Q +    R  G+R ++   S +    +++   ++  P  II G  + + G +  +    G
Sbjct: 576 QEFAAKARKQGLRVDVDASSDR-MQKKIRNQQKQKVPFMIIAGDEDMANGAVSFRY-RDG 633

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            + +                  IP+ E ++ + K +++
Sbjct: 634 SQENG-----------------IPVDEAIAKIAKAVED 654


>gi|120612314|ref|YP_971992.1| prolyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|152074741|sp|A1TTD0|SYP_ACIAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120590778|gb|ABM34218.1| prolyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 581

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 43/115 (37%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++ +L  G  +     +R+  ++   +R      G   +  P+++ ++   +  
Sbjct: 26  MTRAGLIK-KLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVEVTMPVVQPAE-YWQET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              D+    +  ++D  G+   ++    ++   +AR    ++  +       +  
Sbjct: 84  GRFDKMGPELLRIRDRHGRDFVVQPTSEEVVTDIARQELRSYKQLPKNLYQIQTK 138


>gi|91776355|ref|YP_546111.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus
           flagellatus KT]
 gi|123254150|sp|Q1GZR7|SYT_METFK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91710342|gb|ABE50270.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus
           flagellatus KT]
          Length = 635

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/159 (8%), Positives = 46/159 (28%), Gaps = 3/159 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   I   +   +RN++  +G+  + TP +     + +        
Sbjct: 255 MQDEAP-GMVFWHPRGWVIWQEVEQYMRNMFREFGYQEVRTPTIMDR-VMWEKSGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  +F+   ++ +  +++        +       +                 +       
Sbjct: 313 HDNMFTTASEN-RDYAVKPMNCPGHIQIFNSTLHSYRDLPLRLAEFGSCHRNEPSGALHG 371

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                      +     + ++   +AD +  +     D+
Sbjct: 372 LMRVRGFTQDDAHIFCTEDQVKDEVADFIVMLYKAYKDF 410



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/355 (12%), Positives = 85/355 (23%), Gaps = 15/355 (4%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    RN     G         +D V              M  T    
Sbjct: 264 FWHPRGWVIWQEVEQYMRNMFREFGYQEVRTPTIMDRVMWEKSGHWQNYHDNMFTTASEN 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + +I +  L         +L E     R        GL  V+      
Sbjct: 324 RDYAVKPMNCPGHIQIFNSTLHSY-RDLPLRLAEFGSCHRNEPSGALHGLMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +V       +   +E+   +        G +E    +E 
Sbjct: 379 TQDDAHIFCTEDQVKDEVADFIVMLYKAYKDFGFNEVLVKLSTRPEKRVGTDEAWDKAEE 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                   N +        G  Y     +        +    +              G  
Sbjct: 439 ALAVALRQNNLDFELQPGEGAFYGPKIEF---TLKDSLGRLWQCGTIQLDFNLPERLGAE 495

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +  K   +        + R +  L    +       + PV    ++         
Sbjct: 496 YVDEDNSRKHPVMLHRAIVGSMERFLGILIENYAGAMP-AWLAPVQAMVLNISDGQADYV 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                 LR  G R +  L  ++    +++    +  P  +I G  E   G + ++
Sbjct: 555 SSVVAELRKNGFRVDSDL-RNEKITYKIREHSLQKLPYLLIAGEREMQTGQVAVR 608


>gi|319401447|gb|EFV89657.1| prolyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 567

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 49/164 (29%), Gaps = 9/164 (5%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   IR   E+     I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNISKIIREEMESIDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVF 115
                  +  L+D +G+  +L     ++   L R       +   T+      YR     
Sbjct: 86  WSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRDELKSYKQLPLTLFQIQSKYRDEKRP 145

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           R        F            +S +    +M    +   + VG
Sbjct: 146 RFGLLRGREFLMKDAYSFHFDEASLDATYQDMYQAYSRIFKRVG 189


>gi|255262231|ref|ZP_05341573.1| prolyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104566|gb|EET47240.1| prolyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 445

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/464 (11%), Positives = 118/464 (25%), Gaps = 63/464 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++   I + +       G  P+  P ++ +D L +     D  
Sbjct: 31  MIKQSAAGIYSWLPLGYKVLKNIENIVHEEQAKAGHMPMLMPTMQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  + D  G+ +       +L   + R    ++  +      Y+I   FR+E     
Sbjct: 90  GEEMLRVTDRHGRDMLYTPTAEELITEIFRSHVSSYKDMP--LTLYQIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFYM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +         G       L    T  S  F   A       D  + F
Sbjct: 180 SYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGESEVFYDSAVTDLSFGDRDIDF 239

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            S+D   ++  + E        ++  +E              +   +      RG+E   
Sbjct: 240 DSVDQCAAI--MQEFTTKYARTDETHDE-----------AVFNEVPEERRRTARGIEVGQ 286

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              +       +    Q P            DG        +       +  + +  +  
Sbjct: 287 IFYFGTKYSDAMGATVQGP------------DGKPVAVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFGNQL 421
                         V I  M   D D+ +  Q         G+  E ++   ++  G + 
Sbjct: 335 DKGIIWPEGVTPFHVGILNMKQGDEDTDAACQAIYDSFAALGL--EPLYDDRNERAGGKF 392

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              D    P  I  G      G++++      +      +    
Sbjct: 393 ATMDLIGLPWRITVGPRGLKNGVVELTSRRTSESEEMTAEQAVE 436


>gi|148652560|ref|YP_001279653.1| prolyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|172048509|sp|A5WDG2|SYP_PSYWF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148571644|gb|ABQ93703.1| prolyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 576

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +++  ++   +R   +N G   +  P+ + ++   +    ED     
Sbjct: 34  KLASGLYVWLPMGLKVLQKVEKIVREEMQNIGGQEVLMPMTQPAELWQESGRFED-YGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +    D   +   L  
Sbjct: 93  LLRFTDRHNRDFVLGP 108


>gi|212638370|ref|YP_002314890.1| threonyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226701399|sp|B7GGN9|SYT_ANOFW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212559850|gb|ACJ32905.1| Threonyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 643

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 57/478 (11%), Positives = 126/478 (26%), Gaps = 99/478 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+  + TP+L   +   K     D    G+F  
Sbjct: 265 GLPLWLPKGATIRRTIERYIVDKELSLGYQHVYTPVLGSVELY-KTSGHWDHYKDGMFPP 323

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 324 MEMDNEQLVLRPMNCP-------HHMMVYKHKIHSYRELPIRIAELGTMHRYEMS----- 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                    A   +  +   TL    I      I    +++++ IL+     G    + R
Sbjct: 372 --------GALTGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILDVYKDFGLTDYSFR 423

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L      DK   +    +     E       +      L   + +   +F    L+    
Sbjct: 424 LSYRDPQDKEKYYDDDAM----WEKAQSMLKEAMDELGLDYYEAEGEAAFYGPKLDV--- 476

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           ++   +           + ++  E    +    +       ++      T   + A L  
Sbjct: 477 QVRTALGKDETLSTVQLDFLLP-ERFDLTYIGEDGKPHRPVVIHRGVVSTMERFVAFLIE 535

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                             G +   ++  + Q +P                       +  
Sbjct: 536 EYK---------------GAFPTWLAPIQVQVIPVAPS----------------IHMDYA 564

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 +       +   + +     +R A                Q++       P  +
Sbjct: 565 YEVKHALQVAGIRVEVDEREEKIGYKIREA----------------QMQK-----IPYML 603

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           + G  E +   + ++    G++ S                 T+P+   V ++ K +++
Sbjct: 604 VVGDNEVNERAVNVR--KYGEQKS----------------ETMPLDAFVDSIAKEVRK 643


>gi|195472319|ref|XP_002088448.1| Aats-thr [Drosophila yakuba]
 gi|194174549|gb|EDW88160.1| Aats-thr [Drosophila yakuba]
          Length = 747

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 63/221 (28%), Gaps = 21/221 (9%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL   +   +    + N   +      G   + G   +  +   +    Q   +      
Sbjct: 534 ELEQWNAAEKALAESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQLDFQL 593

Query: 331 GGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
             R++       G+           +G    ++A+ +   +      + P  +  +    
Sbjct: 594 PIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQVMVVPVGP 653

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                 Q     L  AG  +E    +      +++ A        ++ G  ERS   + +
Sbjct: 654 AYDQYAQSVRDQLHAAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNV 713

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           +                           + ++EL++ ++KI
Sbjct: 714 R------------------TRDNKVHGEVSVAELITKLQKI 736



 Score = 38.3 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++  ++  Y   GF  + +P + Y+  L           + +FS + + 
Sbjct: 371 FQPRGAHIYNTLMSFMKAEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYAENMFSFEAEK 429

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 430 -ETFALKPMNCPG 441


>gi|28899107|ref|NP_798712.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364768|ref|ZP_05777355.1| proline--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876810|ref|ZP_05889165.1| proline--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895895|ref|ZP_05904391.1| proline--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|81839761|sp|Q87MC3|SYP_VIBPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28807331|dbj|BAC60596.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089375|gb|EFO39070.1| proline--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308091476|gb|EFO41171.1| proline--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308115298|gb|EFO52838.1| proline--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328474355|gb|EGF45160.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 571

 Score = 56.0 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSERVKEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDIELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G  + K+   G++    + +     +++
Sbjct: 540 DEGNFEYKNRRTGEKTPVAMADIVEHVKSQ 569


>gi|317181405|dbj|BAJ59189.1| threonyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 612

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 50/120 (41%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +  +      + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHAFALKLKEALKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEHNHAE 480


>gi|229086371|ref|ZP_04218548.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696983|gb|EEL49791.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 566

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 75/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P L+ ++ L +           
Sbjct: 34  QNASGIYSFLPLGLKVLHKVERIVREEMERAGAVELLMPALQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNDREFALGATHEEVITDLVRDEIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYSRLYQAYSNIFSRCGLNFRAVIADSGAMGGKDTHEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVASYTKS-NEAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+    +  +
Sbjct: 272 IEASNCVKSM 281



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 35/108 (32%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+     +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREVGETIYSSLQEQGYEVLLDDRTERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A  +    +++   ++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEELHTYIAN 563


>gi|227513539|ref|ZP_03943588.1| threonine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227083412|gb|EEI18724.1| threonine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
          Length = 658

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 52/186 (27%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G++ + TP+L   D   K     +   + +F  
Sbjct: 274 GLPYWMPNGATIRRTIERYIVDKEVANGYEHVYTPVLANLDLY-KQSGHWEHYREDMFPP 332

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 333 MDMGDGEELELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 392

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +     +  +M +      I    + +   + +  +   +   + 
Sbjct: 393 MTLNDGHTFVALDQIQEEFQNILKLMVEVYHDFDINDYTFRLSYRDPENTEKYFDDDEMW 452

Query: 186 GDDKLN 191
              +  
Sbjct: 453 NRAQSM 458



 Score = 46.8 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/242 (11%), Positives = 72/242 (29%), Gaps = 5/242 (2%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + I  ++  +  D + + +      +     EK F++  + +          + + +   
Sbjct: 412 QNILKLMVEVYHDFDINDYTFRLSYRDPENTEKYFDDDEMWNRAQSMLKGAMDELGLDYV 471

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD-GLVSRFKGQNVPAT---G 350
              G   + G   +      + NE+    +        R+D   V     Q+ P     G
Sbjct: 472 EAEGEAAFYGPKLDVQTKTALGNEETLSTIQLDFMLPERFDLHYVGEDGKQHRPVMIHRG 531

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
               + R +  L  +             +              +     LR   IR+ + 
Sbjct: 532 LVSTMERFVAYLTEIYKGAFPTWLAPHQVKIIPVSQDKHGDYAKQINDQLRRLKIRSSVD 591

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              ++  G  ++ A     P  ++ G  E +   + ++   + +  +  +       +  
Sbjct: 592 -TRAEKMGYLIRDAQTHKIPYTLVVGDEEVNGKSVSVRRYGEKETQAESLDTFVDEIQKD 650

Query: 471 VA 472
           +A
Sbjct: 651 IA 652


>gi|119186087|ref|XP_001243650.1| hypothetical protein CIMG_03091 [Coccidioides immitis RS]
          Length = 560

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 14/122 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y+ YGF+ + TP + Y  SL +           ++ +
Sbjct: 136 GSPYFHPDGAHIFNKLMSFLRAQYKQYGFEEVITPTM-YKKSLWEKSGHWYIYKDDMYEV 194

Query: 74  QDDD------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           +                +   L+          + ++       P R     P+ RNE  
Sbjct: 195 RGRGATGQTVDVEIGEDEQYGLKPMNCPGHCVLFASKTRSYRSLPVRFAEFSPLHRNEIS 254

Query: 121 GP 122
           G 
Sbjct: 255 GS 256


>gi|82753545|ref|XP_727721.1| threonyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23483702|gb|EAA19286.1| threonyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 930

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/480 (9%), Positives = 136/480 (28%), Gaps = 52/480 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF    +   +I N++++ +R  Y    +D + TP +   D L K           +F 
Sbjct: 498 SGF--WFSHGAKIYNKLIEFMRKEYRIRKYDEVITPNIFSCD-LWKTSGHYQNYKNCMFI 554

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
              ++ +W  ++             +         +Y+  P+   +     R        
Sbjct: 555 FNIENKEW-GMKPMNCPG-------HCLIFKQLNASYKSLPIRLADFGVLHRNEITGSLS 606

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                   +  DA +      +L+ +  +  +    I     L G   K  L+   +  +
Sbjct: 607 GLTRVRRFQQDDAHIFC----SLDHIKTEVVNVLQFIFFVYNLFGF--KYDLYLSTRPPK 660

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            +  +   D  +K   + ++L   + + +       G  +     D +            
Sbjct: 661 YIGDIETWDFAEKSLKEALELANVKWKLNEGDGAFYGPKIDIVLRDSL------------ 708

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY----E 308
                      + + G  +L     +     Y +    +       L   +        E
Sbjct: 709 ---------NRSHQCGTVQLDFQLPIRFNLQYKNKEYGVGQETDSNLVNNSNTDVIEKKE 759

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                 + N +              +D  +       +           + + ++     
Sbjct: 760 DSTLENIDNNQDPINNQPGGVLKKGFDRPII------IHRAILGSVERFVAILVEHTSGK 813

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                     ++  +    +  +KY      L       ++ +  +     +++ A  + 
Sbjct: 814 FPFWLSPRQAIVLPISDKFNEYAKYIHTV--LTNNLFDVDVDISVN-TLNKKIREAQLKQ 870

Query: 429 CPLAIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREARVAQITIPISELVSTVKK 487
               ++ G  E S   + ++D      +    ++   +  +  +   ++ ++E+   ++K
Sbjct: 871 YNFILVVGEKEISTNTVTVRDRDNPNDQKVYTVQELVNTFKKMLDINSVKLNEITPFIQK 930


>gi|229815406|ref|ZP_04445738.1| hypothetical protein COLINT_02454 [Collinsella intestinalis DSM
           13280]
 gi|229808939|gb|EEP44709.1| hypothetical protein COLINT_02454 [Collinsella intestinalis DSM
           13280]
          Length = 569

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 34/103 (33%), Gaps = 4/103 (3%)

Query: 366 ESSTNNIKEMGPVLITTMDHDS---DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           E+       + P  ++ M  D    +        T  L  AGI   +     +  G +  
Sbjct: 457 ENGIIWPVSIAPYEVSIMPLDPTIPECAEVCDRLTAELCEAGIEVIVDDRDIR-PGVKFA 515

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             D    P  I+ G      G +++KD A G+     I    S
Sbjct: 516 DNDLMGFPYQIVLGKRGLKNGTVELKDRATGEREDVAIDEVAS 558



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I D +R+  +  G   +  P++  +    +     +     +  +
Sbjct: 38  GLYSYLPLAWRSLRKIEDIVRDEMDAAGAQELLMPIMVDAQV-WRESGRYNVYGPELMRI 96

Query: 74  QDDDGQWISLRY 85
            D   +   L  
Sbjct: 97  SDRHEREFVLGP 108


>gi|72547539|ref|XP_843247.1| threonyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|323363762|emb|CBZ12768.1| putative threonyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 787

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/455 (11%), Positives = 130/455 (28%), Gaps = 23/455 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N +++ +R  Y   GF  + +P + YS  L       ++    +F  
Sbjct: 306 GSAFWLPHGARIYNTLVEFLRKKYRRCGFQEVISPNM-YSSKLWMVSGHWEKYADSMFCT 364

Query: 74  QDDDGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG------PGRFR 126
           +  + +   L+          + ++       P R    G + RNE  G        R  
Sbjct: 365 K-CEKEDFGLKPMNCPGHCIMFASQPHSYKELPIRYADFGVLHRNELSGALTGLTRVRRF 423

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK------------- 173
           Q     +                 ++D    +G K   YH      K             
Sbjct: 424 QQDDAHIFCRMDQITDEMEGQMQFLSDVYGVLGFKFYFYHSTRPANKLGSDALWDQSESY 483

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +   +    G+  +             D       +   L+    R+++   +    N  
Sbjct: 484 LRTALNRFCGIPEELPDPLHPDQRFHYDGKPDSVKKMKALMKKAERSEDPNAWKGPTNGG 543

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
              I+ +        +  +     L +         +  +     ++ +   + + + + 
Sbjct: 544 DGWIENVGDGAFYGPKIDIVVEDALRRRHQCATIQLDFNLPSRFGLKYTLPAAEKDETTV 603

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
                  +       +         K KP  + +       D  +   + + V      +
Sbjct: 604 GPTEKQRHADPAPTASSPAVAEGESKPKPGKYEAAVRDLGIDLELDANQARPVMIHRAIL 663

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           G     +A+       +    + P  +  +   + +    Q     +  AG   ++  G+
Sbjct: 664 GSLERSIAILCEHFGGDWPFWLSPRQVMVVPVSASNYEYSQQVRDTIHDAGFHVDVDNGA 723

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +     +++ A++      ++ G  E+    + I+
Sbjct: 724 A-TLDKKIRNAEKARYNFILVVGQQEQDATGVSIR 757


>gi|254167083|ref|ZP_04873936.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623939|gb|EDY36501.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 612

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/214 (8%), Positives = 52/214 (24%), Gaps = 1/214 (0%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E    ++    ++L      +          +    ELV +            R      
Sbjct: 357 EMAIKVLKDFGLELGDYEVAIRFTRDFYEENKDFIRELVKLVNRPVLIQMWDERFFYFVL 416

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
                   +     A+    +  E  +          G            +         
Sbjct: 417 KFEFNFVDSLNKAAALSTVQIDVENAERYGITYYDENGNEKYPYILHCSPSGAVERILYA 476

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           +                   + P  +  +    D +          R+ G R ++     
Sbjct: 477 MLEKADMDAKKGKKPKLPVWLSPTQVRIIPVKDDFIGCSIQEMDYFRSEGFRVDID-DRD 535

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +   +++ A++   P  ++ G  E+ + +L ++
Sbjct: 536 LSVSRKIRDAEKEWIPYIVVIGEKEKEKDILTVR 569


>gi|315646839|ref|ZP_07899954.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315277769|gb|EFU41093.1| threonyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 635

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 70/259 (27%), Gaps = 17/259 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNI-YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K   IRN +    R + +   G+D + TPL+     L +     D     ++ 
Sbjct: 262 GMPFFLPKGTIIRNELEQFARELQFHR-GYDEVRTPLMMNKR-LWEMSGHWDHYKDNMY- 318

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
               D Q   ++             +         +YR  P+  +E     R        
Sbjct: 319 FSKVDEQEYVMKPMNCPG-------HMLVYQNSLHSYRELPIRLSEFGQVHRHEYSGALS 371

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                 +    DA + +      + +G +  D+   +      D  +E      D   ++
Sbjct: 372 GMMRVRTFCQDDAHIFVRPDQIHDEIG-QVIDFISQVYRVFGFDYTIELSTRPEDSMGSD 430

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L         +    Q +   + EG          G  +    +D +         +  
Sbjct: 431 ELWEQAESSLQEVLDQQKLPYRINEGDG-----AFYGPKIDFHILDSLKRSWQCGTIQLD 485

Query: 253 HELYELVKGTIAGEKGFNE 271
            +  E    +   E     
Sbjct: 486 FQFPEKFDLSYIAEDNQKH 504



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/244 (10%), Positives = 72/244 (29%), Gaps = 6/244 (2%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           ++I  ++ F+S        +    +        G +EL   +E   +   +  ++     
Sbjct: 395 DEIGQVIDFISQVYRVFGFDYTIELSTRPEDSMGSDELWEQAESSLQEVLDQQKLPYRIN 454

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
              G  Y     +  +       +         F              + +   +    F
Sbjct: 455 EGDGAFYGPKIDFHILDSLKRSWQCGTIQLDFQFPEKFDLSYIAEDNQKHRPVVIHRAVF 514

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
                 + +  +    +      + PV +  +      +       + L  AG+R E+ +
Sbjct: 515 GSIERFIGILTEHYGGAFPLW--LAPVHVMLIPVSDHYIDFSLKVKKRLEHAGVRVEVDI 572

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A     P   + G  E +  ++ ++   +G+     I +  +     +
Sbjct: 573 -RNEKLGYKIREAGLLKTPYTFVLGEKEMNSDLVAVRKRGEGELGESAIDDMIARLRKEI 631

Query: 472 AQIT 475
               
Sbjct: 632 ESRE 635


>gi|314966718|gb|EFT10817.1| threonyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
          Length = 689

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 11/252 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+S  +        E    +  FLSI  +  +++ Y  +    +      + +   E  +
Sbjct: 414 DDSHTYCTREQAPGEIKKQIEFFLSILADFGLNDFYLELSTRESDSAKEEKFIGSDEDWQ 473

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR------- 333
            +    +++  S+ +    +      Y   +   V +   +     ++            
Sbjct: 474 VATDTLDQVCRSTGLRLVPDPGGAAFYGPKVSVQVRDAIGRTWQMSTIQYDFNQPERFDL 533

Query: 334 -YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       +   +  +     + R I  L    +    +  + PV +  +         
Sbjct: 534 EYAAADGTHQRPIMLHSAKLGSVERFIGVLTEHYAGAFPVW-LSPVQVRLVPVAEAFNDY 592

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
              + ++L + GIR E  L S + FG +++ A +   P  +I G  +   G +  + L  
Sbjct: 593 VTGFAEVLGSRGIRVETDLSSDR-FGKKIRNASKDKVPFILIAGGEDAEAGAVSFR-LRD 650

Query: 453 GKELSREIKNNE 464
           G +++  + +  
Sbjct: 651 GSQINGVVLDEA 662


>gi|300702990|ref|YP_003744592.1| proline--tRNA ligase [Ralstonia solanacearum CFBP2957]
 gi|299070653|emb|CBJ41948.1| Proline--tRNA ligase [Ralstonia solanacearum CFBP2957]
          Length = 574

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R   ++   +R      G   +  P+++  + L +     D+ 
Sbjct: 31  MIKKLGAGIYTYMPVGLRAIRKVEQIVREEMNAAGAVEMLMPVVQPGE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
            + +  ++D   + + ++    ++   +AR    ++  +       +             
Sbjct: 90  GEELMRVKDRHERDLVIQPTSEEVVTDIARTEIRSYKQMPVNFYQIQTKFRDERRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D      + +  +M        +  G
Sbjct: 150 MRGREFTMKDAYSFDRDVEGMKVSYQKMFDAYTRIFQRFG 189



 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 35/113 (30%), Gaps = 3/113 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  + +D      ++       L  AGI   +     +  G  
Sbjct: 463 DARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAELAAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +    P  ++ G      G L+++        +    +  +  ++R+AQ
Sbjct: 522 FADWELIGVPFRVVVGERGLKEGKLELQGRRDEAATAVAPADVLATLKSRLAQ 574


>gi|241668104|ref|ZP_04755682.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876639|ref|ZP_05249349.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842660|gb|EET21074.1| prolyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 565

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 47/166 (28%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R      G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPIGLKVLQKIQNIVREEMNKAGASELLLPSVLPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L+D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLKDRHERDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F                    +M     + L+ +G
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSQCLHNTYNKMHETYCNILDKIG 189



 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 30/103 (29%), Gaps = 3/103 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  ++++             Q L   GI   +    ++  G  
Sbjct: 459 DENGIIWPEAIAPYQVAILPINYNKSESVKQTADKLYQELLAKGIDVILDDRGAR-PGVM 517

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              AD       ++ G     +G+++ K+    ++    ++  
Sbjct: 518 FADADLIGYSHHVVIGDRLLEQGLIEYKNRKTQEKQEITLEKL 560


>gi|170734931|ref|YP_001774045.1| tRNA synthetase class II (G H P and S) [Burkholderia cenocepacia
           MC0-3]
 gi|169820969|gb|ACA95550.1| tRNA synthetase class II (G H P and S) [Burkholderia cenocepacia
           MC0-3]
          Length = 203

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 8/128 (6%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARY 94
            I+ N G +    P L   D+  +     +     +++  D  G+   L  + TA     
Sbjct: 17  AIFINAGAEEAIVPALWSQDTFIQKAGGSEIIG-QMWAFPDKKGRACCLIPEATA----L 71

Query: 95  VAEN---FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
             E              + I   +R E+   GR+R+F Q   + +  + E+A      + 
Sbjct: 72  FQERCSELLGRQRERMLFYIARCYRYERPQAGRYREFSQLGFEYLCPNPESALKRSREVA 131

Query: 152 ADTLEAVG 159
               +++G
Sbjct: 132 LGFFDSLG 139


>gi|163790751|ref|ZP_02185177.1| threonyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873931|gb|EDP68009.1| threonyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 645

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 9/122 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E+  G      K   IR  I   I +   + G+  + TP++   +   K     D  
Sbjct: 255 ISPEVGSGLPFWLPKGATIRRTIERYIVDREISLGYQHVYTPIMADVNLY-KTSGHWDHY 313

Query: 67  NKGVFSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           ++ +F   D   G+ + LR             +         +YR  P+   E     R+
Sbjct: 314 HEDMFPPMDMGDGEMLVLRPMNCP-------HHMMVYKNDVHSYRELPIRIAELGQMHRY 366

Query: 126 RQ 127
            +
Sbjct: 367 EK 368



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 42/120 (35%), Gaps = 5/120 (4%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             +   ++  + +           I  ++ D           + +   G+R E+    ++
Sbjct: 527 RFVAYLIEEYKGAFPTWLAPVQATIIPVNLD-MHTDYAYEIKKQMERIGMRVEVD-ERNE 584

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +++ +  +  P  ++ G  E     + ++    G++ +  I N   + E    +I 
Sbjct: 585 KMGYKIRASQTQKIPYQLVVGDSEVQDNTVAVR--KYGEKATVTI-NLSEYLETVSKEIE 641


>gi|319777143|ref|YP_004136794.1| glycyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038218|gb|ADV34417.1| Glycyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 453

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 52/225 (23%), Gaps = 26/225 (11%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K   +  E +  +    +               G +             L       Y+ 
Sbjct: 240 KKAEKFAEYLGLSKENVRIREHEKEELSHYSS-GTSDIEYLFPFGWGELLGIANRTDYDL 298

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL------K 363
                   E               Y   V+  K               ++  L      +
Sbjct: 299 NAHMKATGEN------------LEYVDPVTNEKFVPFVIEPSIGLDRLMLAILIDSYDEE 346

Query: 364 SLESST-----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            LE        +  K + P  +  +        K     + L  AG+        + + G
Sbjct: 347 KLEKDDSRVVLHLHKNLAPYQVAVLPLVKKLNDKATEVYEKLLKAGLSVT--YDETGSIG 404

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            + +  D    P  +        +  + I+D    K+ +  I N 
Sbjct: 405 KRYRRQDAIGTPYCVTIDFDSLEKNTVTIRDRDSMKQKTVLINNL 449


>gi|326792022|ref|YP_004309843.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326542786|gb|ADZ84645.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 657

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 44/124 (35%), Gaps = 2/124 (1%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI-RAE 408
             SIG     +A+   + +      + PV +  +              +  +  GI + E
Sbjct: 520 RTSIGCYERTLAMLIEKYAGQFPTWLAPVAVKVLPLSDKYADYAAEVVKAFKDHGILKVE 579

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
               + K  G +++ A     P  ++ G  E     + ++   KG E  + +++  +  +
Sbjct: 580 ADYRTEK-IGYKIREARMERIPYIVVVGAEEMENKTVSVRSRQKGDEGVQSLESFVNRVD 638

Query: 469 ARVA 472
             + 
Sbjct: 639 EEIK 642



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RI   +   + +  E  G+   +TPL+  SD   K     D    G+F L
Sbjct: 262 GLPLLMPKGARIVQTLQRFVEDEEEKRGYVLTKTPLMAKSDLY-KMSGHWDHYKDGMFVL 320

Query: 74  QD--DDGQWISLRYDLTAPL 91
            D   D +  +LR  +T P 
Sbjct: 321 GDEEKDKEVFALRP-MTCPF 339


>gi|228992547|ref|ZP_04152474.1| Prolyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228998595|ref|ZP_04158182.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228761063|gb|EEM10022.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228767181|gb|EEM15817.1| Prolyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 566

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/250 (8%), Positives = 75/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P L+ ++ L +           
Sbjct: 34  QNASGIYSFLPLGLKVLHKVERIVREEMERAGAVELLMPALQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNDREFALGATHEEVITDLVRDEIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYSGLYQAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVASYAKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           ++    +  +
Sbjct: 272 MEASNCIKSM 281



 Score = 40.2 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 35/108 (32%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+     +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREVGETIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A  +    +++   ++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEELHAYIAN 563


>gi|294788637|ref|ZP_06753879.1| proline--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483514|gb|EFG31199.1| proline--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 571

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/110 (10%), Positives = 34/110 (30%), Gaps = 5/110 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++A    G        +R+  ++ + +R      G   +  P+++ +D L K  
Sbjct: 26  MLRAGLIKANA-SGLYTWMPMGLRVLRKVENIVREEMNRVGCVELLMPVIQSAD-LWKES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
                    +  + D             ++   + R    ++  +     
Sbjct: 84  GRWQFYGDELLRITDRHDNEFCFSPTCEEMITDIVRKEINSYKQLPKNFY 133



 Score = 41.0 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 37/131 (28%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V+I  M+    +D  +        L   G+   +     +  G  
Sbjct: 460 DEKGIIWTDAMAPFTVVIVPMNYKKSADVKAAADKIHAELLAQGVDVLLDDRDERA-GVL 518

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           L  ++    P  I+ G      G +                  E          +I ++E
Sbjct: 519 LADSELLGIPHRIVIGDRALKEGNV------------------EYAERKVGESQSIAVNE 560

Query: 481 LVSTVKKILQE 491
           +V  +K +L +
Sbjct: 561 IVGKIKNVLAK 571


>gi|227534800|ref|ZP_03964849.1| threonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227187556|gb|EEI67623.1| threonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 674

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G++ + TP+L   D   K     D   + +F  
Sbjct: 277 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLY-KTSGHWDHYREDMFPP 335

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 336 MDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 395

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +    ++  ++ D  E   I    + +   + K  +   +   + 
Sbjct: 396 MTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMW 455

Query: 186 GDDKLN 191
              +  
Sbjct: 456 TRSQSM 461



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 81/255 (31%), Gaps = 19/255 (7%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D   + +      +     EK F++  + +          + +K+    
Sbjct: 416 KILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLKLDYYE 475

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GF 351
             G   + G   +      + N++    +        R++       G+         G 
Sbjct: 476 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGI 535

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R I  L  +              +    ++   L       + +  AG+R ++  
Sbjct: 536 VGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLVAGLRVKVD- 594

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A  +  P  ++ G  E +   + ++    G E ++E   N        
Sbjct: 595 DRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVR--RYGDEHTKEEAGNMF------ 646

Query: 472 AQITIPISELVSTVK 486
                 I  LV+ VK
Sbjct: 647 ------IDALVAEVK 655


>gi|224499901|ref|ZP_03668250.1| prolyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 568

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 78/256 (30%), Gaps = 6/256 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   D  K      + I  +V FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKDLEKFVTPDQKSITDIVEFLE 271

Query: 246 IDLEKSMHELYELVKG 261
           + +EK+M  +   V  
Sbjct: 272 VPIEKTMKSMLYQVDD 287



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDRAERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 557


>gi|195147146|ref|XP_002014541.1| GL19239 [Drosophila persimilis]
 gi|198473694|ref|XP_001356405.2| GA18821 [Drosophila pseudoobscura pseudoobscura]
 gi|194106494|gb|EDW28537.1| GL19239 [Drosophila persimilis]
 gi|198138068|gb|EAL33469.2| GA18821 [Drosophila pseudoobscura pseudoobscura]
          Length = 754

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 68/226 (30%), Gaps = 21/226 (9%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           EK   EL   ++  +    + N   +      G   + G   +  +   +    Q   + 
Sbjct: 536 EKYLGELEQWNDAEKALEESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQ 595

Query: 326 GSVGGGGRYD-GLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                  R++   ++    +  P       +G    ++A+ +   +      + P  +  
Sbjct: 596 LDFQLPIRFNLNYIADDGEKKRPVIIHRAILGSVERMIAILTENYAGKWPFWLSPRQVMV 655

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +          Q     L  AG  +E    +      +++ A        ++ G  ERS 
Sbjct: 656 VPVGPAYDQYAQTVKDQLHAAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSS 715

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
             + ++                           + +SEL++ ++KI
Sbjct: 716 NTVNVR------------------TRDNKVHGEVSVSELITKLQKI 743



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++  I++ Y   GF  + +P + Y+  L           + +FS + + 
Sbjct: 378 FQPRGAHIYNTLMGFIKSEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYAENMFSFEAEK 436

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 437 -EKFALKPMNCPG 448


>gi|166367159|ref|YP_001659432.1| prolyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189083503|sp|B0JTD7|SYP_MICAN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166089532|dbj|BAG04240.1| proline-tRNA ligase [Microcystis aeruginosa NIES-843]
          Length = 603

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 9/139 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ ++ L +     D   K    
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVREEMNKAGAQECLLPQLQPAE-LWQESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +F+L D   + + L     ++   +AR +  ++  +      Y+I   FR+E        
Sbjct: 96  MFALTDRQNRELGLGPTHEEVITAVARDLIRSYRQLP--VNLYQIQTKFRDEIRPRFGLM 153

Query: 127 QFIQCDVDNVGSSAETADA 145
           +  +  + +  S     + 
Sbjct: 154 RGREFIMKDAYSFNLDEEC 172



 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 48/164 (29%), Gaps = 24/164 (14%)

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES----STNNIKEMGPVLITTMDHDS 387
             Y           +   G  +         +S +         I     +++     D+
Sbjct: 455 AFYTNEAGESTPICMGCYGIGVSRLAQAAVEQSYDKDGIIWPVAIAPYQAIVVIPNLADA 514

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           + +   +     L  AGI   +     +  G + K AD    P  I+ G           
Sbjct: 515 EQVKTAESLYNELNQAGIETLLDDRDERA-GVKFKDADLIGIPYRIVTG----------- 562

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           K L  GK         E    A      + I+E+VS +K  + +
Sbjct: 563 KSLKSGK--------VELVERASKKASEVAINEVVSYLKTAISK 598


>gi|153836755|ref|ZP_01989422.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260900371|ref|ZP_05908766.1| proline--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|149749901|gb|EDM60646.1| prolyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308108556|gb|EFO46096.1| proline--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 571

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAVETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 27/90 (30%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M        + +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSERVKEEAEKLYAELTAMGIEV-LFDDRKERPGVMFSDIELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G  + K+   G++    + +     +++
Sbjct: 540 DEGNFEYKNRRTGEKTPVAMADIVEHVKSQ 569


>gi|26553728|ref|NP_757662.1| threonyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|26453735|dbj|BAC44066.1| threonyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 566

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/356 (10%), Positives = 97/356 (27%), Gaps = 27/356 (7%)

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            +     E     M +     +       +              +   I         E 
Sbjct: 234 GHWEHYKENNFPPMEVDNETFMLRPMTCPHHLTYFNLKPHSYKELPYAICEDSKLHRYES 293

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              L     L++     +       + D   D  +  N   + +   ++     ++ S+ 
Sbjct: 294 SGGLI---GLERVRTMELFDCHIITKPDQIEDVIRQLNNILKIVHKRMNIKIDRVDLSLR 350

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK-ISSTIVRGLEYYTGCVYEAILG 312
           +  + VK     +   +    + ++++K  Y +  I+  ++     +++        I+ 
Sbjct: 351 DPKDKVKYHDDDKMWKSSEKQLRDILKKLNYKAMEIEGEAAFYGPKIDFQVKTNLGKIIT 410

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              +           V     Y    +  K   +   G      R I  L S        
Sbjct: 411 ISTIQLDFLLPERFDV----EYIDENNTKKRPVLIHFGVIGTYERFIATLLSQTKGLLPF 466

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 +     +++  L   +     L    IR ++   S++    +++ A     P  
Sbjct: 467 WLAPVQISIIPVNNNIHLDYCKKIASELEENNIRVKLD-DSNERLAKKIREAQISKIPFQ 525

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           ++ G  E     +  +                  + +     T+  +E +  +KK+
Sbjct: 526 LVIGDNEIKNNEITYR------------------KYSEENSTTLKFNEFIDFIKKL 563


>gi|116495184|ref|YP_806918.1| threonyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|122263399|sp|Q037Z6|SYT_LACC3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116105334|gb|ABJ70476.1| Ser-tRNA(Thr) hydrolase [Lactobacillus casei ATCC 334]
          Length = 657

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G++ + TP+L   D   K     D   + +F  
Sbjct: 260 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLY-KTSGHWDHYREDMFPP 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 319 MDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 378

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +    ++  ++ D  E   I    + +   + K  +   +   + 
Sbjct: 379 MTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMW 438

Query: 186 GDDKLN 191
              +  
Sbjct: 439 TRSQSM 444



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 80/255 (31%), Gaps = 19/255 (7%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D   + +      +     EK F++  + +          + +K+    
Sbjct: 399 KILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLKLDYYE 458

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GF 351
             G   + G   +      + N++    +        R++       G+         G 
Sbjct: 459 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGI 518

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R I  L  +              +    ++   L       + +  AG+R ++  
Sbjct: 519 VGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLVAGLRVKVD- 577

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A  +  P  ++ G  E +   + ++    G E + E   N        
Sbjct: 578 DRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVR--RYGDEHTEEEAGNMF------ 629

Query: 472 AQITIPISELVSTVK 486
                 I  LV+ VK
Sbjct: 630 ------IDALVAEVK 638


>gi|330901012|gb|EGH32431.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 192

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 4/126 (3%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-AR 93
            I+   G +    P L   D+  +     +     +++ +D  G+   L  + TA    R
Sbjct: 9   AIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIG-QMWAFEDKAGRPCCLIPEATALFQER 67

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
             +E           + +   +R E+   GR+R+F Q  ++ +G S + A      +   
Sbjct: 68  --SEALLEGRREAMFFYVARCYRYERPQAGRYREFTQLGLEILGPSPQQALLRSQAICTG 125

Query: 154 TLEAVG 159
            L+++G
Sbjct: 126 FLDSLG 131


>gi|89093619|ref|ZP_01166566.1| prolyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89082015|gb|EAR61240.1| prolyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 574

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/73 (9%), Positives = 25/73 (34%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +     +R   ++   +R   +  G   +  P ++ ++ L +     ++    +  
Sbjct: 37  SGLYNWLPLGLRTLRKVERIVREEMDKSGAMEVLMPAVQPAE-LWEESGRWEQYGPELLR 95

Query: 73  LQDDDGQWISLRY 85
           + D   +   +  
Sbjct: 96  VNDRHNREFCVGP 108



 Score = 37.5 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 27/90 (30%), Gaps = 1/90 (1%)

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSR 442
           D  ++         Q L+ AG    +     K + G +    D    P  ++        
Sbjct: 484 DKSAEVKELTDRLYQELQQAGYDVIVDDRDKKTSPGVKFADMDLMGIPHRVVISPRGNEA 543

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVA 472
           G L+ K     ++   +I         R+ 
Sbjct: 544 GTLEYKGRRDDEKQDVQIDEVLPLLAERIN 573


>gi|269956448|ref|YP_003326237.1| threonyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305129|gb|ACZ30679.1| threonyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 672

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     L   GIRAE+ L   + F  +++ A +   P  +
Sbjct: 570 WLAPVQVLAVPVAEAFDGYLKDVVAQLTARGIRAEVDLSDDR-FAKKIRNASKEKVPFVL 628

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           I G  +   G +  +     ++    +     
Sbjct: 629 IAGGEDADAGAVSFRYRDGRQDNGVPVAEAVE 660


>gi|242278821|ref|YP_002990950.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259516380|sp|C6BRH1|SYT_DESAD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|242121715|gb|ACS79411.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 642

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 3/88 (3%)

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+    +           I T+    +     Q   Q LR  GIRAE+    ++  G +
Sbjct: 521 LLEHTGGALPAWLSPVQAKILTVTDSQN--EFAQKVLQFLREKGIRAEVD-DRNEKLGYK 577

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIK 448
           ++ A     P  ++ G  E +   + ++
Sbjct: 578 VREAQLEKIPYMLVIGDKEVAAESVNVR 605



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 9/106 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  + D  R  +   G+  ++ PL+   +   K     D   + ++  
Sbjct: 259 GMTIWHPKGALIRAILEDFERKEHLKRGYQFVQGPLILKRELWEKS-GHYDNYRENMY-F 316

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            + D Q   ++             +        R+YR  P    E 
Sbjct: 317 TEIDEQSYGIKPMN-------CLSHMLVFKSRLRSYRDLPQRYFEH 355


>gi|254466898|ref|ZP_05080309.1| prolyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206687806|gb|EDZ48288.1| prolyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 451

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/460 (8%), Positives = 112/460 (24%), Gaps = 61/460 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   + +     G  P+    ++ +D L +     D  
Sbjct: 31  MIKQSSAGIYSWLPLGFKVLKKIESIVHDEQIRAGHIPMLMATMQPAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  ++D   + +       ++   + R    ++  +      Y++   FR+E     
Sbjct: 90  GQEMLRIKDRHDRDMLFGPTNEEMITDIFRAHVSSYKDLP--LTMYQVQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  ++    L      + 
Sbjct: 148 GVMRGREFYM----------------------------KDGYNFDLSKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D + +F   A     +       
Sbjct: 180 SYLRTYERMGLQAI------------PMRADGGPIGGDYTHEFLVLAETGESE------- 220

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D   +     +      + E+    L   +    ++    +    +           
Sbjct: 221 VFYDSAVTDLTFGDRDIDYDSVEQCQAVLEEFTSRYARTDETHDEALFNQIPEERRRVAR 280

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G     I  F     +               DG        +       +  + +  +  
Sbjct: 281 GIEVGQIFYFGTKYSESMGATVQGP------DGKPVPVHMGSHGIGVSRLLGAIIEASHD 334

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                           I  +    D            L  AG+   ++   ++  G +  
Sbjct: 335 DNGIIWPEGVTPFHCGIVNLKQGDDEADAACNQLYAALSAAGLD-PLYDDRNERAGGKFA 393

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             D    P  I  G      G++++     G+      + 
Sbjct: 394 TMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEELSPEE 433


>gi|191638692|ref|YP_001987858.1| threonyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239632065|ref|ZP_04675096.1| ser-tRNA(Thr) hydrolase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|238693055|sp|B3WF49|SYT_LACCB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190712994|emb|CAQ67000.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Lactobacillus casei BL23]
 gi|239526530|gb|EEQ65531.1| ser-tRNA(Thr) hydrolase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|327382733|gb|AEA54209.1| Threonyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385920|gb|AEA57394.1| Threonyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 657

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G++ + TP+L   D   K     D   + +F  
Sbjct: 260 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLY-KTSGHWDHYREDMFPP 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 319 MDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 378

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +    ++  ++ D  E   I    + +   + K  +   +   + 
Sbjct: 379 MTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMW 438

Query: 186 GDDKLN 191
              +  
Sbjct: 439 TRSQSM 444



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 80/255 (31%), Gaps = 19/255 (7%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D   + +      +     EK F++  + +          + +K+    
Sbjct: 399 KILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLKLDYYE 458

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GF 351
             G   + G   +      + N++    +        R++       G+         G 
Sbjct: 459 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGI 518

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R I  L  +              +    ++   L       + +  AG+R ++  
Sbjct: 519 VGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLAAGLRVKVD- 577

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A  +  P  ++ G  E +   + ++    G E + E   N        
Sbjct: 578 DRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVR--RYGDEHTEEEAGNMF------ 629

Query: 472 AQITIPISELVSTVK 486
                 I  LV+ VK
Sbjct: 630 ------IDALVAEVK 638


>gi|50420561|ref|XP_458817.1| DEHA2D08206p [Debaryomyces hansenii CBS767]
 gi|49654484|emb|CAG86963.1| DEHA2D08206p [Debaryomyces hansenii]
          Length = 474

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/437 (11%), Positives = 105/437 (24%), Gaps = 47/437 (10%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++  ++N    YGF  + TPL+ Y   L +     +   + +F +    
Sbjct: 64  FLPHGTRIFNKLVHFMKNQQLKYGFQEVITPLI-YKTKLWEMSGHWENYKEDMFKVV--- 119

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G  +S                 +  +     +       +    P               
Sbjct: 120 GNDLS----------------KEEDISHEHNHDDSEGLHDYGLKPMNCPGHCLIFSKFER 163

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           S  E              EA G       +   ++     I  ++    D+  N   ++ 
Sbjct: 164 SYNELPIRYSDFSSLHRNEASGALSGLTRVRRFHQDDGH-IFCELYQIQDEITNTINLIK 222

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
                     ++ V+  L    TD         N    Q+  ++   +     S+ E   
Sbjct: 223 DTYKVFGIDSVKDVEFFLSTRPTDKFMGDITTWNDAESQLTNVLDNTAGRGNWSIREGDG 282

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
              G        +      ++           +     +                 P+M 
Sbjct: 283 AFYGPKIDILLKDAFDKKHQVGTIQLDFQLPSRFKLNYISKDGNRD--------NQPIMI 334

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
            +                         N               A  +L+           
Sbjct: 335 HRAVFGSLERFFAILLDHYQGKWPFWINPRQAVIIPVNDTHHDAAVALQKKLVGDIMDDT 394

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V ++ M                        ++    S+  GN++K A ++     ++ G 
Sbjct: 395 VEVSPMTG-----------------YNFYVDVD-SRSETVGNRIKDATQKGYSYILMLGD 436

Query: 438 GERSRGMLQIKDLAKGK 454
            +   G + I+     K
Sbjct: 437 KDLQNGTVAIRSRDDRK 453


>gi|301066747|ref|YP_003788770.1| threonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300439154|gb|ADK18920.1| Threonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 657

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G++ + TP+L   D   K     D   + +F  
Sbjct: 260 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLY-KTSGHWDHYREDMFPP 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 319 MDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 378

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +    ++  ++ D  E   I    + +   + K  +   +   + 
Sbjct: 379 MTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMW 438

Query: 186 GDDKLN 191
              +  
Sbjct: 439 TRSQSM 444



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 80/255 (31%), Gaps = 19/255 (7%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D   + +      +     EK F++  + +          + +K+    
Sbjct: 399 KILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLKLDYYE 458

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GF 351
             G   + G   +      + N++    +        R++       G+         G 
Sbjct: 459 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGI 518

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R I  L  +              +    ++   L       + +  AG+R ++  
Sbjct: 519 VGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKKQMLAAGLRVKVD- 577

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A  +  P  ++ G  E +   + ++    G E + E   N        
Sbjct: 578 DRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVR--RYGDEHTEEEAGNMF------ 629

Query: 472 AQITIPISELVSTVK 486
                 I  LV+ VK
Sbjct: 630 ------IDALVAEVK 638


>gi|294499151|ref|YP_003562851.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294349088|gb|ADE69417.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 405

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E   G        + IRN + +  +  +   G+  I+TP++   + L +     +  
Sbjct: 23  MSIEEAPGMPFFLPNGMIIRNELENYWKQKHYKAGYQEIKTPIMMKQE-LWEQSGHWEHY 81

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
           ++ ++   + D Q  +++      
Sbjct: 82  HENMY-FSNVDEQNYAIKPMNCPG 104



 Score = 43.7 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 31/340 (9%), Positives = 80/340 (23%), Gaps = 8/340 (2%)

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
                N          + +     +        +       + +    +   +Y I   N
Sbjct: 42  RNELENYWKQKHYKAGYQEIKTPIMMKQELWEQSGHWEHYHENMYFSNVDEQNYAIKPMN 101

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
                 +         +       +           L G+  +    + D         +
Sbjct: 102 CPGAILLFSSKRRSYRELPIRYAELGLVHRHELSGSLNGLLRVRSFTQDDAH--LFVELS 159

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
               +I  +++F+         +    +        G  E    +E   +S  +   +  
Sbjct: 160 QIEAEISRILAFIHDFYSHFGFDYKVELSTRPEKFMGNIETWNQAEKSLQSVLSEKGLDY 219

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT-- 349
                 G  Y     +  +       +     V        ++D +      +       
Sbjct: 220 QVNEGDGAFYGPKIDFHILDSLGRSWQ--CGTVQLDFLMPEKFDCMYIGEDNKPHRPVMI 277

Query: 350 -GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
                G     +A+            + PV +  +      +         L   G R E
Sbjct: 278 HRAIYGSVERFMAILIEHYEGQFPLWLAPVQLKLLPIAPPHVEYAYKVKHELELKGYRVE 337

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +     +  G +++ A+ +  P   + G  E     L ++
Sbjct: 338 VD-DRIEKIGLKIREAEMQKVPYMAVIGDKEVENESLAMR 376


>gi|163740902|ref|ZP_02148295.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385893|gb|EDQ10269.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 451

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/462 (11%), Positives = 117/462 (25%), Gaps = 67/462 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   +       G  P+  P L+ +D L K     D  
Sbjct: 31  MIKQSAAGIYSWLPLGFKVLKKIETIVHEEQMRAGHIPMLMPTLQSAD-LWKESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  + D  G+ +       +L   + R    ++  +      Y I   FR+E     
Sbjct: 90  GQEMLRISDRHGRDMLYGPTNEELITDIFRSHVGSYKDLP--LTLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFYM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +         G       L    T  S  F   A       D  + +
Sbjct: 180 SYLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLADTGESEVFYDSAVTDLTFGDRAIDY 239

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            S++  + + E  E        ++  +E              +   +    + RG+E   
Sbjct: 240 DSVEQCQGVLE--EFTSKYARTDETHDE-----------ALFNEVPEERRRVARGIEVGQ 286

Query: 304 GCVYEA-ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              +          N +        V                     G S  +  +I A 
Sbjct: 287 IFYFGTKYSEALGANVQGPDGKQSPV--------------HMGSHGIGVSRLLGAIIEAS 332

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY--QMYTQMLRTAGIRAE-MFLGSSKNFGN 419
              +                     D+ +    +   + L  AG+  E ++    +  G 
Sbjct: 333 HDDKGIIWPEGVTPFHCGIVNLKQGDAEADAACESLYEALTAAGL--EPLYDDRKERAGG 390

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +    D    P  I  G      G++++     G+      +
Sbjct: 391 KFATMDLIGLPWRITVGPRGLKNGVVELTSRRSGESEELSPE 432


>gi|66045587|ref|YP_235428.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256294|gb|AAY37390.1| tRNA synthetases, class-II (G, H, P and S) [Pseudomonas syringae
           pv. syringae B728a]
          Length = 193

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 4/126 (3%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-AR 93
            I+   G +    P L   D+  +     +     +++ +D  G+   L  + TA    R
Sbjct: 9   AIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIG-QMWAFEDKAGRACCLIPEATALFQER 67

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
             +E           + +   +R E+   GR+R+F Q  ++ +  S + A      +   
Sbjct: 68  --SEALLEGRRDAMFFYVARCYRYERPQAGRYREFTQLGLEILSPSPQQALLRSQAICTG 125

Query: 154 TLEAVG 159
            L+++G
Sbjct: 126 FLDSLG 131


>gi|76801848|ref|YP_326856.1| threonyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|121731906|sp|Q3IRE7|SYT_NATPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|76557713|emb|CAI49296.1| threonine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 642

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 82/270 (30%), Gaps = 23/270 (8%)

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
                 +  N+  +QI+ ++    +D E ++    E   G+       +E+   ++   +
Sbjct: 389 ERDAIEQEVNVIMDQIEEVLDTFDLDYEVALATRPEKSVGS-------DEIWEQAQTQLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
           S   S+ +        G  Y     + A       N     V                  
Sbjct: 442 SVLESSGMDYDIESGDGAFYGPKIDF-AFEDALGRNWDGPTVQLDFNMPERFDLTYTGED 500

Query: 342 KGQNVPATG----FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             ++ P       +       +V ++  + +         V I  +  D+        Y 
Sbjct: 501 NEEHRPVMIHRALYGSYERFFMVLIEHFDGNFPTWLAPEQVRILPVSDDN------IGYA 554

Query: 398 QMLRTA---GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           + L+       R E+    S   G +++ A     P  ++ G  E   G + ++D  + +
Sbjct: 555 KQLKNRYLDDFRVEIE-DRSWTVGKKIQTAHDDRVPYMLVVGDNEEEAGTVSVRDRFEDE 613

Query: 455 ELSREIKNNESWREARVAQITIPISELVST 484
               +++       + V +  +   + V  
Sbjct: 614 RKDVDVETFRDHLASEVEEKRV-EPDFVDE 642



 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   + D +  + ++ G++ +ETP L  ++ L K     +     +F L
Sbjct: 262 GLPLYHPNGKAVLRELEDFVDQLNDDQGYEFVETPHLFRTE-LWKQSGHYENYVDDMF-L 319

Query: 74  QDDDGQWISLRYDLTAPLA 92
            D + +   L+       A
Sbjct: 320 LDVNDEEYGLKPMNCPGHA 338


>gi|317176942|dbj|BAJ54731.1| threonyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 612

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 53/141 (37%), Gaps = 3/141 (2%)

Query: 337 LVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
             +       P       +G     +A+ S     N    + P  I  +  + +      
Sbjct: 472 FTNECNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFAL 531

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + L+   I  E+   +  +   +++ A+++  P+ ++ G  E    +L I+D  K  
Sbjct: 532 KLKEELKKRDIFVEVLDKND-SLNKKVRSAEKQKIPMILVLGNEEMESEILSIRDREKQA 590

Query: 455 ELSREIKNNESWREARVAQIT 475
           +    +K   +  E+++ +++
Sbjct: 591 QYKMPLKEFLNMVESKMQEVS 611



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNECNHAE 480


>gi|239928618|ref|ZP_04685571.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291436943|ref|ZP_06576333.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291339838|gb|EFE66794.1| prolyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 567

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 52/141 (36%), Gaps = 5/141 (3%)

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITT 382
                  + D L    K   V    + IG+SR + AL      +      +E+ P  +  
Sbjct: 420 RKYTDALKLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLCWPQEVAPADVHV 479

Query: 383 MDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +       ++     ++ L  AG+R  +      + G +   ++    P  ++ G    +
Sbjct: 480 VAAGKALQTELALDVSEKLAAAGVRVLVDDRPGVSPGVKFTDSELIGVPRILVAGRR-AA 538

Query: 442 RGMLQIKDLAKGKELSREIKN 462
            G++++KD   G+     ++ 
Sbjct: 539 EGVVELKDRRTGEREELTVEE 559



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++   +   +R   +  G   +  P L   +         D     +F LQD  
Sbjct: 48  WLPLGKKVLANVERIVREEMDAIGAQEVLLPALLPREPYEA-TGRWDEYGPELFRLQDRK 106

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 107 GGDYLLGP 114


>gi|229006095|ref|ZP_04163783.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228755171|gb|EEM04528.1| Prolyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 566

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/250 (8%), Positives = 75/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P L+ ++ L +           
Sbjct: 34  QNASGIYSFLPLGLKVLHKVERIVREEMERAGAVELLMPALQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNDREFALGATHEEVITDLVRDEIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYSGLYQAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVASYAKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           ++    +  +
Sbjct: 272 MEASNCIKSM 281



 Score = 40.2 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 35/108 (32%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+     +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREVGETIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A  +    +++   ++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEELHAYIAN 563


>gi|221124302|ref|XP_002161215.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 587

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 41/109 (37%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++   +R      G   +  P+++ ++ L +     D+ 
Sbjct: 5   MIKKLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVELTMPVIQPAE-LWQETGRFDKM 63

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   +   ++    ++   +AR   +++  +       +  
Sbjct: 64  GPELLRIKDRHERDYVVQPTSEEVVTDIARQEIKSYKQLPKNLYQIQTK 112


>gi|159030425|emb|CAO91326.1| proS [Microcystis aeruginosa PCC 7806]
          Length = 603

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 9/139 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ ++ L +     D   K    
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVREEMNKAGAQECLLPQLQPAE-LWQESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +F+L D   + + L     ++   +AR +  ++  +      Y+I   FR+E        
Sbjct: 96  MFALTDRQNRELGLGPTHEEVITAVARDLIRSYRQLP--VNLYQIQTKFRDEIRPRFGLM 153

Query: 127 QFIQCDVDNVGSSAETADA 145
           +  +  + +  S     + 
Sbjct: 154 RGREFIMKDAYSFNLDEEC 172



 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 6/150 (4%)

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES----STNNIKEMGPVLITTMDHDS 387
             Y           +   G  +         +S +         I     +++     D+
Sbjct: 455 AFYTNEAGESTPICMGCYGIGVSRLAQAAVEQSYDKDGIIWPVAIAPYQAIVVIPNLADA 514

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           + +   +     L  AGI   +   + +  G + K AD    P  I+ G      G +++
Sbjct: 515 EQVKTAESLYNELNQAGIETLLDDRNERA-GVKFKDADLIGIPYRIVTGKS-LKSGKVEL 572

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIP 477
            + A  K     I    S+ +  ++++ + 
Sbjct: 573 VERASKKASEVAINEVVSYLKTAISKVNVS 602


>gi|126728909|ref|ZP_01744724.1| prolyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126710839|gb|EBA09890.1| prolyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 445

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I + +    +  G  P+  P L+ +D L +     +  
Sbjct: 31  MIKQAQAGIYSWLPLGYKVLKKIENIVHEEQQRAGHIPLLMPTLQSAD-LWRESGRYEAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            + +  + D  G+ +       +L   + R    ++  +       +  
Sbjct: 90  GEEMLRITDRHGRDMLYGPTNEELITDIFRSYVRSYKDLPLTLYHIQWK 138


>gi|329724323|gb|EGG60835.1| proline--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 567

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 50/141 (35%), Gaps = 7/141 (4%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   IR   E+     I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNISKIIREEMESIDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
                  +  L+D +G+  +L     ++   L R   +++  +      ++I   +R+EK
Sbjct: 86  WSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRDELKSYKQLP--LTLFQIQSKYRDEK 143

Query: 120 HGPGRFRQFIQCDVDNVGSSA 140
                  +  +  + +  S  
Sbjct: 144 RPRFGLLRGREFLMKDAYSFH 164


>gi|328881181|emb|CCA54420.1| Threonyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 640

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 49/137 (35%), Gaps = 20/137 (14%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R    L    +       + PV  T +      +     +    +  G+R ++   S 
Sbjct: 520 IERFFAVLLEHYAGAMP-PWLAPVQATGIPIGDAHVDYLHEFAAKAKKQGLRVDVDSSSD 578

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +    +++ A ++  P  II G  + + G +  +    G + +                 
Sbjct: 579 R-MQKKIRNAQKQKVPFMIIAGDEDMAAGAVSFRY-RDGSQENG---------------- 620

Query: 475 TIPISELVSTVKKILQE 491
            IP+ E ++ + KI+++
Sbjct: 621 -IPVDEAIAKIAKIVED 636


>gi|314933737|ref|ZP_07841102.1| glycine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653887|gb|EFS17644.1| glycine--tRNA ligase [Staphylococcus caprae C87]
          Length = 463

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/218 (9%), Positives = 54/218 (24%), Gaps = 5/218 (2%)

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYN--SNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           + +K     E+        ++ +            K            +   ++      
Sbjct: 248 QWLKDLNINEENMRLRDHDADELSHYSNATTDIEYKFPFGWGELWGIASRTDFDLQKHSE 307

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
              E  K     +      Y    S    +   A          +   K   +  +    
Sbjct: 308 HSGEDFKYHDPETNEKYVPYCIEPSLGADRVTLAFLCDAYEEEGVEGSKDARTVMHFHPA 367

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
           + P     +       S+     + L +      +    S++ G + +  D    P  I 
Sbjct: 368 LAPYKAAVLPLSKKLSSEAIKIFEQL-SQSFS--IDFDESQSIGKRYRRQDEIGTPYCIT 424

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                     + ++D    +++   I   E++   +V 
Sbjct: 425 FDFDSLEDNQVTVRDRDSMEQVRMPISELETFFAEKVK 462


>gi|257488036|ref|ZP_05642077.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331008707|gb|EGH88763.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 192

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 4/126 (3%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-AR 93
            I+   G +    P L   D+  +     +  +  +++  D  G+   L  + TA    R
Sbjct: 9   AIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIS-QMWAFNDKAGRACCLIPEATALFQER 67

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
             +E           + +   +R E+   GR+R+F Q  ++ +G S + A      +   
Sbjct: 68  --SEALLNGRREAVFFYVARCYRYERPQAGRYREFTQLGLEILGPSPQQALQRSQAICTG 125

Query: 154 TLEAVG 159
            L+++G
Sbjct: 126 FLDSLG 131


>gi|238810062|dbj|BAH69852.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 466

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 52/225 (23%), Gaps = 26/225 (11%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K   +  E +  +    +               G +             L       Y+ 
Sbjct: 253 KKAEKFAEYLGLSKENVRIREHEKEELSHYSS-GTSDIEYLFPFGWGELLGIANRTDYDL 311

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL------K 363
                   E               Y   V+  K               ++  L      +
Sbjct: 312 NAHMKATGEN------------LEYVDPVTNEKFVPFVIEPSIGLDRLMLAILIDSYDEE 359

Query: 364 SLESST-----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            LE        +  K + P  +  +        K     + L  AG+        + + G
Sbjct: 360 KLEKDDSRVVLHLHKNLAPYQVAVLPLVKKLNDKATEVYEKLLKAGLSVT--YDETGSIG 417

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            + +  D    P  +        +  + I+D    K+ +  I N 
Sbjct: 418 KRYRRQDAIGTPYCVTIDFDSLEKNTVTIRDRDSMKQKTVLINNL 462


>gi|254469374|ref|ZP_05082779.1| prolyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961209|gb|EEA96404.1| prolyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 441

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 32/102 (31%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ N+I   +       G   +  P ++ +D L +     D   K +  +
Sbjct: 38  GIYAWLPLGHRVLNKIQRIVEEEQNRSGAVQLLMPTIQPAD-LWRESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D   + +       ++   + R    ++  +       +  
Sbjct: 97  EDRHEREMLFGPTNEEMITDIFRSYVRSYKDLPLNLYHIQWK 138


>gi|332525938|ref|ZP_08402079.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332109489|gb|EGJ10412.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 635

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/258 (10%), Positives = 67/258 (25%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  ++ P +    +L +     D+  + +F+ 
Sbjct: 261 GTVFWHPKGWTVWQEVEQYMRRVYRDNGYQEVKGPQI-LDKALWEKTGHWDKYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKRDYALKPMNCPG-------HILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +       L               +    D + +          ++ 
Sbjct: 372 IMRVRGFTQDDGHIFCTEDMILGECVAYTALLQKVYRDFGFTDILYKVATRPEKRIGSD- 430

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  DK ++  ++ +K    +           G  +     D +         +   
Sbjct: 431 ----AIWDKAEEALIESLKRSGCDYVIAPGDGAFYGPKIEYTLKDAIGRQWQCGTMQVDF 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +      E G   
Sbjct: 487 SMAERLDAEYVAEDGSRR 504



 Score = 43.7 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 31/83 (37%), Gaps = 4/83 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV                   + L+  G+R  + L  ++    +++    +  P  +
Sbjct: 535 WLAPVQAVVASITDSQADYAAEVAKSLQKQGLRVHLDL-RNEKINYKIREHSVQKAPFIL 593

Query: 434 IQGTGERSRGMLQIK---DLAKG 453
           + G  E++ G + ++   +L  G
Sbjct: 594 VVGDKEKANGAVAVRARGNLDLG 616


>gi|298694953|gb|ADI98175.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|323440773|gb|EGA98482.1| threonyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442928|gb|EGB00551.1| threonyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 645

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R  +    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVQIIPVNVD-LHYDYARQLQDELKSQGVRVSID-ERNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     D   + +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDHYQEDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
              D  + + LR           A    +    P R   +G + R E           R 
Sbjct: 321 MQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRG 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +     +  M+ D  +  G +   + +   + +  +   +   + 
Sbjct: 381 MTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 NKAENM 446


>gi|207721477|ref|YP_002251917.1| prolyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206586637|emb|CAQ17223.1| prolyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 574

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R   ++   +R      G   +  P+++  + L +     D+ 
Sbjct: 31  MIKKLGAGIYTYMPVGLRAIRKVEQIVREEMNAAGAVEMLMPVVQPGE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
            + +  ++D   + + ++    ++   +AR    ++  +       +             
Sbjct: 90  GEELMRVKDRHERDLVIQPTSEEVVTDIARTEIRSYKQMPVNFYQIQNKFRDERRPRFGI 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D      + +  +M        +  G
Sbjct: 150 MRGREFTMKDAYSFDRDVEGMKVSYQKMFDAYTRIFQRFG 189



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 3/87 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  + +D      ++       L  AGI   +     +  G  
Sbjct: 463 DARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAELVAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQI 447
               +    P  ++ G      G L++
Sbjct: 522 FADWELIGVPFRVVVGERGLKEGKLEL 548


>gi|152981235|ref|YP_001354678.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166980130|sp|A6T2D1|SYP_JANMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151281312|gb|ABR89722.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 577

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 51/134 (38%), Gaps = 6/134 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R+  ++   IR    N     +  PL++ ++ L +     D+ 
Sbjct: 31  MIKKIGSGIYTYMPMGLRVIRKVEAIIREEMNNAHAIELLMPLVQPAE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D  G+  +++    ++   + R   +++  +      Y I   FR+E+    
Sbjct: 90  GAELMRVKDRHGREFAIQPTSEEVVTDVVRTEIKSYRQLP--INFYHIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDVDNVG 137
              +  +  + +  
Sbjct: 148 GLMRGREFTMKDAY 161


>gi|160902301|ref|YP_001567882.1| threonyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189083616|sp|A9BHF0|SYT_PETMO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160359945|gb|ABX31559.1| threonyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 640

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 75/248 (30%), Gaps = 17/248 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          + N ++   R +++ YG+  +ETP +     L       D   + +F  
Sbjct: 262 GMPFFLPNGKIVLNELMAYSRQVHKKYGYVEVETPQIMNIK-LWHQSGHWDHYKENMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD- 132
            + +   ++++             +         +YR  P+   E     R+ +      
Sbjct: 320 TEKEDMPMAVKPMNCPG-------HILIYKNNFVSYRDLPIRMFEFGKVHRYERSGVLHG 372

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +  V +  +      CM      E + + +    I        + IL  +    +D + +
Sbjct: 373 LFRVRAFTQDDAHIFCMPSQMEEEIIKVIQLTNEIFSTFGFKYEAILSTM---PEDHMGD 429

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                RA D L     + ++    E R D       G  +     D +         +  
Sbjct: 430 IESWERATDAL----KKALEKSNMEYRIDEGEGAFYGPKIDFNVTDSLGRKWQCTTIQLD 485

Query: 253 HELYELVK 260
            ++ E   
Sbjct: 486 FQMPERFD 493



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 41/127 (32%), Gaps = 27/127 (21%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA---EMFLGSSKNFGN-QLKYADRRNC 429
            + PV ++ +        + + ++++L   GIR    +          N Q+K       
Sbjct: 535 WLSPVQVSILPVSEKFNEEAKKFSRILEQEGIRVYVNDSDATVGYKIRNEQMKK-----V 589

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
           P  I+ G  E +   +   ++   K  + E                +     +  +K  +
Sbjct: 590 PYMIVFGEKEMNSDTI---NIRTRKGDTIE---------------NVSKERFIEEIKNEI 631

Query: 490 QENKEEI 496
           +    ++
Sbjct: 632 KNRNLDL 638


>gi|197103889|ref|YP_002129266.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|238690165|sp|B4RE95|SYT_PHEZH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|196477309|gb|ACG76837.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 658

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K + +   +   +R   +  G+  + TP +       +     D+    +F 
Sbjct: 261 KGMVFWHEKGLTLWRTVESYVRRRLDEAGYQEVRTPQV-LDRVFWEKSGHWDKYRPNMFV 319

Query: 73  LQDDDGQWISLRYDLTAPLA 92
            + ++G+ +SL+        
Sbjct: 320 CETEEGEELSLKPMNCPGHV 339



 Score = 42.1 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 43/364 (11%), Positives = 96/364 (26%), Gaps = 15/364 (4%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R      G         +D V         +    M       
Sbjct: 265 FWHEKGLTLWRTVESYVRRRLDEAGYQEVRTPQVLDRVFWEKSGHWDKYRPNMFVCETEE 324

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
           G + +   +       +    +K       ++ E     R        GL  V+      
Sbjct: 325 GEELSLKPMNCPGHVQIFKFGQKSYRDLPLRMAEFGACHRYEPSGALHGLMRVRA----F 380

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F +   +  E    +    SI  +  +   +  +        G +E    +E 
Sbjct: 381 TQDDAHIFCREDQIEEETARFIELANSIHADFGLERDHIALATRPEVRAGSDEFWDKAEA 440

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
              +      ++       G  Y     +   +    +                   G  
Sbjct: 441 QMLAAARKAGVEPVIAEGDGAFYAPKLDW---VLKDSIGRTWTCGTIQLDYVLPERLGAE 497

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y       +   +        + R I  L    +    +  + PV +      SD+    
Sbjct: 498 YVAEDGSKQRPVMLHRAICGSLERFIGVLIENYAGAFPLW-LAPVQVVVATITSDADDYA 556

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK- 452
           +     L+  G+R E+ L  ++    +++       P+  + G  E   G + ++ L   
Sbjct: 557 RAAAAELKAKGLRVELDL-RNEKINYKVREHSLAKVPVIAVVGRREAEEGKVALRRLGSD 615

Query: 453 GKEL 456
           G+++
Sbjct: 616 GQQI 619


>gi|27467857|ref|NP_764494.1| prolyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866745|ref|YP_188412.1| prolyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251810694|ref|ZP_04825167.1| prolyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876305|ref|ZP_06285172.1| proline--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366773|ref|ZP_06613449.1| proline-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|81175026|sp|Q8CST7|SYP_STAES RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81175027|sp|Q5HPS8|SYP_STAEQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27315402|gb|AAO04536.1|AE016747_33 proline-tRNA ligase [Staphylococcus epidermidis ATCC 12228]
 gi|57637403|gb|AAW54191.1| prolyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805854|gb|EES58511.1| prolyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295330|gb|EFA87857.1| proline--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319074|gb|EFE59444.1| proline-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329736329|gb|EGG72601.1| proline--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329736632|gb|EGG72898.1| proline--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 567

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 9/164 (5%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   IR   E+     I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNISKIIREEMESIDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGPVF 115
                  +  L+D +G+  +L     ++   L R       +   T+      YR     
Sbjct: 86  WSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRDELKSYKQLPLTLFQIQSKYRDEKRP 145

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           R        F         +  +S +    +M    +   + VG
Sbjct: 146 RFGLLRGREFLMKDAYSFHSDEASLDATYQDMYQAYSRIFKRVG 189


>gi|150388509|ref|YP_001318558.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|166980095|sp|A6TL31|SYP_ALKMQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149948371|gb|ABR46899.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 570

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 22/79 (27%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   ++   +R   +  G        L+  + L +        
Sbjct: 31  MIRKLVAGVYSYLPLGYRTLKKVEQIVREEMDRAGAQEALMSALQPKE-LWEATGRWQAI 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L+D   +   L  
Sbjct: 90  GPEMMRLKDRHNREFCLGP 108



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/105 (12%), Positives = 32/105 (30%), Gaps = 4/105 (3%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYAD 425
                +     V+     +  +     +     L + G   E+ L   K + G + K A+
Sbjct: 465 KWPLALAPYQVVVTIVNPNKDEQRELGEKIYSKLLSKG--VEVLLDDRKESPGVKFKDAE 522

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               P+ ++ G       +++    A  ++   E          +
Sbjct: 523 LIGIPIRVVAGKN-AGENIVEFALRATDEKKEVEADEVVEMVMDQ 566


>gi|313112983|ref|ZP_07798626.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624703|gb|EFQ08015.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 594

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/331 (10%), Positives = 87/331 (26%), Gaps = 10/331 (3%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M     +       +   I  N       +  +IG    D   
Sbjct: 258 TSGHWDHYRENMFPAMEMEGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIAHDFRY 317

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L+ I++   F      L     +  +             +   +  +  +   + 
Sbjct: 318 ESSGTLKGIERGRHFCQNDAHLFCTPEQIKSEVANVCDLIFEVYKDFNITDYRCVLSLRD 377

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +  +              L  +   +    + +  I  ++     L+        A  
Sbjct: 378 PADKKKYHDDDAMWNHAEQALREVLTEL--GIHFTEEIGEAAFYGPKLDVNVKPAVGAEY 435

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                                  D   +      +           +   ++  +     
Sbjct: 436 TLSTCQLDFCLPA---KFHLTYVDKDGTEKTPVVLHRAILGSLDRFMAYLIEETKGKFPT 492

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN-CP 430
                 V +  +     +L   +  T+ L  AG+R  +    ++  G +++ A + +  P
Sbjct: 493 WLAPTQVKVLPVS--EKTLDYAEGVTEKLVEAGVRVVLD-DDNQKIGYKIREAQQVDRVP 549

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
             ++ G  E   G + ++D  KG+  + E+ 
Sbjct: 550 YMLVLGAKEAEAGNISVRD-RKGETTTMELD 579



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/230 (9%), Positives = 56/230 (24%), Gaps = 9/230 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG          +   + + I+      G+  + TP +   +   K     D   + +F 
Sbjct: 213 RGLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLY-KTSGHWDHYRENMFP 271

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR             +         +YR  P+   E     R+       
Sbjct: 272 AMEMEGESYVLRPMNCP-------HHMMIYANRPHSYRDLPMRIGEIAHDFRYESSGTL- 323

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                      +        + +++      D    +     +      + L       +
Sbjct: 324 KGIERGRHFCQNDAHLFCTPEQIKSEVANVCDLIFEVYKDFNITDYRCVLSLRDPADKKK 383

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                   +  ++   + +  L      +       G  L       + +
Sbjct: 384 YHDDDAMWNHAEQALREVLTELGIHFTEEIGEAAFYGPKLDVNVKPAVGA 433


>gi|206561773|ref|YP_002232538.1| prolyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|226699125|sp|B4E5W6|SYP_BURCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|198037815|emb|CAR53759.1| prolyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 578

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138


>gi|254253311|ref|ZP_04946629.1| Prolyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895920|gb|EAY69800.1| Prolyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 578

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138



 Score = 40.6 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 21/86 (24%), Gaps = 3/86 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M +D               L  AGI   +     +  G  
Sbjct: 463 DDKGIIWPESIAPFEVVLCPMGYDRSDAVREAADKLYAELVAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQ 446
               +    P  ++ G      G ++
Sbjct: 522 FADWELIGVPHRVVIGERGLKEGKIE 547


>gi|116872750|ref|YP_849531.1| prolyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123463747|sp|A0AIC0|SYP_LISW6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116741628|emb|CAK20752.1| prolyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 568

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIEAIIREELEAIGAAELLLPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYKLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +   + +    A D      +  V L + +   +   +  K A    + I  +V FL 
Sbjct: 213 LSEIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKELEKVATANQKFIADIVEFLE 271

Query: 246 IDLEKSMHEL 255
           + +EK++  +
Sbjct: 272 VPIEKTIKSM 281



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNMKSEEQVAFAESLYDSLQKAGFSVLIDDRAERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDEL 557


>gi|241764278|ref|ZP_04762308.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366347|gb|EER60877.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 639

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 68/258 (26%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R +Y + G+  ++ P L    +L +     D+    +F+ 
Sbjct: 261 GVVFWHPKGWAVWQQVEQYMRRVYRDNGYLEVKGPQL-LDKTLWEKTGHWDKYRDNMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKRDYALKPMNCPG-------HILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +       L               +    + I +          ++ 
Sbjct: 372 IMRVRGFTQDDGHIFCTEDHILPECTAYTALLQKVYKDFGFSNIIYKVATRPEARIGSDE 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                + DK +   ++ ++    E           G  +     D +         +   
Sbjct: 432 -----SWDKAEHALMESLRASGCEFEIAPGDGAFYGPKIEYTLKDAIGRQWQCGTMQVDF 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 487 SMPERLDAEYVGEDGARH 504


>gi|222480176|ref|YP_002566413.1| threonyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453078|gb|ACM57343.1| threonyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 649

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 43/153 (28%), Gaps = 16/153 (10%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    +       +V ++  +           V I  +    ++L       
Sbjct: 506 NEDHQPVMIHRALYGSYERFFMVLIEHFDGDFPLWLAPEQVRILPVS--DETLGYAHRVK 563

Query: 398 QMLRTAGIRAEM---FLGSSKNFGNQLKYA---DRRNCPLAIIQGTGERSRGMLQIKDLA 451
             L  AG R E+        +        A   DR   P  +I G  E+  G + ++D  
Sbjct: 564 NELEDAGFRVEVEDRDWTVGRKI-----RAGHDDRL--PYMVIVGEDEQEAGTVSVRDRF 616

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVST 484
           + +    ++        A   +      E V  
Sbjct: 617 ENQRGDVDLDAFVDHLVAERDEKR-TEPEFVDA 648



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   + +    +    G++ +ETP +  ++ L K     +     +F L
Sbjct: 267 GLPLYHPPGKTVLRELSNFANELNRENGYEEVETPHVFRTE-LWKKSGHYENYKDDMF-L 324

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            D + +   L+       A    +   +                 K   G  
Sbjct: 325 LDVNDEEYGLKPMNCPGHATIFDQQSWSY-RDLPQRYFENGKVYRKEQRGEL 375


>gi|75676056|ref|YP_318477.1| prolyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|114152223|sp|Q3SRG6|SYP_NITWN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|74420926|gb|ABA05125.1| Prolyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 439

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  +I   +R      G   +  P L+ +D L +     D  
Sbjct: 31  MIRQEAAGIYAWLPLGLRVLKKIEAIVREEQNRAGAIELLMPTLQLAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  +QD   + +       ++   + R    ++ ++       +  
Sbjct: 90  GPEMLRIQDRHKRELLYGPTNEEMITEIFRGYIRSYKSLPLNLYHIQWK 138



 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 2/101 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V I  +   +    +  +   + L   G+   ++  + +  G + 
Sbjct: 333 DEAGIKWPEAVAPFTVAILNLKQGASDTDEACERIYRELSARGVDV-LYDDTDQRAGAKF 391

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             AD    P  ++ G    + G ++IK    G   +  +++
Sbjct: 392 ATADLIGSPWQVMVGPKGLAEGKVEIKRRGDGSRENVALED 432


>gi|42520791|ref|NP_966706.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|73919843|sp|Q73GH6|SYT_WOLPM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|42410531|gb|AAS14640.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 633

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 81/291 (27%), Gaps = 7/291 (2%)

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I         D                   L G+ + +     D++  F     + SE I
Sbjct: 338 IFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGL-MRVRGFTQDDAHIFCMEEQVNSETI 396

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
                   +  E   +E+            G +E+   +E           +        
Sbjct: 397 KFCDLLKEVYSELGFNEISVKFSDRPDIRAGNDEVWDRAEKALLEAVKEAGLSYKLNPGE 456

Query: 298 GLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           G  Y     +   +AI         Q   +     G         +     +        
Sbjct: 457 GAFYGPKLEFVLKDAIGRNWQCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAILGTF 516

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              + + +++             + I T+ +++D        + +L+  G+R +  L + 
Sbjct: 517 ERFIGILIENYAGKFPVWLAPTQLAILTITNEAD--GYATEISNILKEQGVRVKTDLTNE 574

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           K    +++       P+  I G  E +   + +++L   ++ S  ++    
Sbjct: 575 K-ISYKIRLHSSNKVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKANE 624



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/254 (9%), Positives = 69/254 (27%), Gaps = 13/254 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N +   IR    N G+  ++TP+L   +   +     D+  + +F + + +
Sbjct: 263 WHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWERS-GHWDKFRENMFIVDESE 321

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++        +    +  +                 +                  
Sbjct: 322 NKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDD 381

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +     + ++        + +    ++                +I +   D+ + R    
Sbjct: 382 AHIFCMEEQVNSETIKFCDLLKEVYSELG------------FNEISVKFSDRPDIRAGND 429

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ +K  L+ VK      + +       G  L     D +         +    L E
Sbjct: 430 EVWDRAEKALLEAVKEAGLSYKLNPGEGAFYGPKLEFVLKDAIGRNWQCGTLQVDFILPE 489

Query: 258 LVKGTIAGEKGFNE 271
            +     G  G   
Sbjct: 490 RLGAFYIGADGHKH 503


>gi|300772848|ref|ZP_07082717.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300759019|gb|EFK55846.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 641

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
               +          Q   + L  + IR  + L   +  G +++ A+ +  P  +I G  
Sbjct: 548 QFIVLPVSEKYEEYAQKLLESLNNSDIRGLIDL-RDEKVGRKIRDAEVKKLPYMLIVGEK 606

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           E   G + ++    G          E +RE  + +IT+
Sbjct: 607 EAESGTVSVRKHGSGD---VGSMTPEEFREVLIKEITV 641



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 6/61 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS------LGKFLPDEDRPN 67
           G      K   +R +++D ++      G++P+ TP + +           K+  D  +P 
Sbjct: 262 GLPLWLPKGAALRQKLIDFMQRAQLKAGYEPVVTPHIGHKQLYVTSGHYEKYGEDSFQPI 321

Query: 68  K 68
           K
Sbjct: 322 K 322


>gi|257052564|ref|YP_003130397.1| glycyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691327|gb|ACV11664.1| glycyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 586

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 2/95 (2%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V +  +        + +     LR  G+        S   G + +  D    P  + 
Sbjct: 483 PTTVGVFPLMDKDGLGERAREIAAELRADGLAV--AYDDSGAIGRRYRRQDEVGTPYCVT 540

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                   G + I+D     +      +  S  EA
Sbjct: 541 VDYDTLEDGTVTIRDRDSTDQTRVAADDLASTIEA 575


>gi|52548690|gb|AAU82539.1| glycyl-tRNA synthetase [uncultured archaeon GZfos18C8]
          Length = 593

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 37/114 (32%), Gaps = 20/114 (17%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V +  +    + +       + LR  G    +    +   G + +  D    P ++   
Sbjct: 489 QVAMLPLLTREELIEPALAIVKTLRENG--VFVSYDDAGTIGRRYRRNDEIGTPFSVTID 546

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                   + I+D                     +AQI +P+ EL  T++ +++
Sbjct: 547 YETLDDDTVTIRDRDS------------------MAQIRVPVGELAETIRAMIR 582



 Score = 43.7 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++ RI D  R +Y    GF  IETP +  +       
Sbjct: 38 GFYDYGPLGAMLKRRIEDIWRKMYVIEEGFYEIETPTIGIAAIFDASG 85


>gi|255322659|ref|ZP_05363803.1| prolyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300220|gb|EET79493.1| prolyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 570

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 4/98 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      R+   I + ++   +  G   I    +  +D L +     D   K +  
Sbjct: 37  SGLYNFLPLGKRVLENIKNIVKEELDEAGAQEISMSFVTSAD-LWRESGRFDVYGKELLR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
            +D       L     +    L R    ++  +     
Sbjct: 96  FKDRKENDFVLSPTNEESVVALVRGKVTSYKQLPLNLY 133



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 21/127 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                  N         I   +  D + +   Q   + LR AG+   +   + + FG ++
Sbjct: 464 DEKGIIWNETLAPFKFEIIVSNLKDEEGVKFAQGLYEDLRGAGVSVLLDDRNER-FGVKM 522

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              +    P A+I G G  + G +++                       +A+ T+  SE+
Sbjct: 523 SEFELMGFPYAVIVGKG-LAEGTVEL------------------VTRDGLAKETVKASEI 563

Query: 482 VSTVKKI 488
           ++ +K +
Sbjct: 564 LARLKSL 570


>gi|227827929|ref|YP_002829709.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229585196|ref|YP_002843698.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|227459725|gb|ACP38411.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228020246|gb|ACP55653.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 574

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 8/169 (4%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-SIGISRLIVALKSLE 366
           E ++   V  + +    F S+                  P+ G        ++ A +  E
Sbjct: 392 EQMIRNNVTIDGKPLGEFISIVEREEKVHGEHFIPHVVEPSFGVERTLFLTILSAYREKE 451

Query: 367 ----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                S         + +  +    + + K     + L     + E+    S + G +  
Sbjct: 452 GRVLLSLPRHLAPYDIAVFPLLEREELIRKSMEIRENLSE---KYEVLYDDSGSIGRRYA 508

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            AD    P AI           + I+D    K++  +I + +   E   
Sbjct: 509 RADEIGIPFAITVDPQTLLDNSVTIRDRDSWKQVRVKIDDLKISLEKLF 557


>gi|227537393|ref|ZP_03967442.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242771|gb|EEI92786.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 641

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
               +          Q   + L  + IR  + L   +  G +++ A+ +  P  +I G  
Sbjct: 548 QFIVLPVSEKYEEYAQKLLESLNNSDIRGLIDL-RDEKVGRKIRDAEVKKLPYMLIVGEK 606

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           E   G + ++    G          E +RE  + +IT+
Sbjct: 607 EAESGTVSVRKHGSGD---VGSMTPEEFREVLIKEITV 641



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 6/61 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS------LGKFLPDEDRPN 67
           G      K   +R +++D ++      G++P+ TP + +           K+  D  +P 
Sbjct: 262 GLPLWLPKGAALRQKLIDFMQRAQLKAGYEPVVTPHIGHKQLYVTSGHYEKYGEDSFQPI 321

Query: 68  K 68
           K
Sbjct: 322 K 322


>gi|240143521|ref|ZP_04742122.1| threonine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257204557|gb|EEV02842.1| threonine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291540396|emb|CBL13507.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Roseburia
           intestinalis XB6B4]
          Length = 591

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/402 (10%), Positives = 114/402 (28%), Gaps = 30/402 (7%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +      ++    +   K     +   +   V  V     +   +      +   A+ 
Sbjct: 205 MFLPKGYTVWQELENYIKAKERKLGYLHVMTPCVGTVNLYKTSGHWDHYKE--NMFPAME 262

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
           ++   + +   N      I         D       +           L+G++      +
Sbjct: 263 VEGESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGEIAHDFRFEASGTLKGIERGRHFCQ 322

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK--GTIAGEKGFNELVVISE 277
            D +  F     + SE   ++        + ++ +   ++         K  ++  + + 
Sbjct: 323 ND-AHLFVTPEQIESEFAKVVELIFDTYKDFNITDYRCVLSLRDPEDKVKYHDDDEMWNN 381

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY--- 334
                    + I I  T   G   + G   +  +   + NE              ++   
Sbjct: 382 AENALRKVLDDIGIEYTEEIGEAAFYGPKLDVNVKPAIGNEYTLSTCQLDFCLPAKFNLS 441

Query: 335 --DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTM-DHDSDSLS 391
             D   ++     +           +   L+  + +           I  + + D +  +
Sbjct: 442 YIDSDGTKKTPVVLHRAILGSLDRFMAYILEETKGNLPLWLAPVQAKILPVKNEDEELNA 501

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 + L   GIR E+    ++  G +++ A     P  ++ G  E + G +  +   
Sbjct: 502 YSHDLYKYLDDNGIRVEID-ERNEKLGYRIREAQMEKVPYLLVLGKNEAADGTVSYR--L 558

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
            G++ S                 T+   + ++ +K+ ++  K
Sbjct: 559 HGEQNS----------------TTVSREDFLALLKEDIRTKK 584



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/230 (10%), Positives = 59/230 (25%), Gaps = 9/230 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   +   + + I+      G+  + TP +   +   K     D   + +F 
Sbjct: 201 RGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTPCVGTVNLY-KTSGHWDHYKENMFP 259

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR             +         +Y+  P+   E     RF       
Sbjct: 260 AMEVEGESFVLRPMNCP-------HHMMIYANRMHSYKDLPIRIGEIAHDFRFEASGTL- 311

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                      +     +  + +E+   K  +          +      + L   +   +
Sbjct: 312 KGIERGRHFCQNDAHLFVTPEQIESEFAKVVELIFDTYKDFNITDYRCVLSLRDPEDKVK 371

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                   +  +    + +  +  E   +       G  L       + +
Sbjct: 372 YHDDDEMWNNAENALRKVLDDIGIEYTEEIGEAAFYGPKLDVNVKPAIGN 421


>gi|170734627|ref|YP_001773741.1| tRNA synthetase class II (G H P and S) [Burkholderia cenocepacia
           MC0-3]
 gi|169820665|gb|ACA95246.1| tRNA synthetase class II (G H P and S) [Burkholderia cenocepacia
           MC0-3]
          Length = 203

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 8/128 (6%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARY 94
            I+ N G +    P L   D+  +     +     +++  D  G+   L  + TA     
Sbjct: 17  AIFINVGAEEAIVPALWSQDTFIQKAGGSEIIG-QMWAFPDKKGRACCLIPEATA----L 71

Query: 95  VAEN---FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
             E              + I   +R E+   GR+R+F Q   + +    E A      + 
Sbjct: 72  FQERCSELLGRQRERMLFYIARCYRYERPQAGRYREFSQLGFEYLCPDPEFAVKRSQEVA 131

Query: 152 ADTLEAVG 159
                 +G
Sbjct: 132 IGFFNLLG 139


>gi|24583842|ref|NP_723726.1| Threonyl-tRNA synthetase, isoform C [Drosophila melanogaster]
 gi|28574141|ref|NP_524839.3| Threonyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|7297922|gb|AAF53167.1| Threonyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|22946308|gb|AAN10805.1| Threonyl-tRNA synthetase, isoform C [Drosophila melanogaster]
          Length = 690

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 64/221 (28%), Gaps = 21/221 (9%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL   ++  +    + N   +      G   + G   +  +   +    Q   +      
Sbjct: 477 ELEQWNDAEKALAESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQLDFQL 536

Query: 331 GGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
             R++       G+           +G    ++A+ +   +      + P  +  +    
Sbjct: 537 PIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTENFAGKWPFWLSPRQVMVVPVGP 596

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                 Q     L  AG  +E    +      +++ A        ++ G  ERS   + +
Sbjct: 597 AYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNV 656

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           +                           + ++EL++ ++KI
Sbjct: 657 R------------------TRDNKVHGEVSVAELITKLQKI 679



 Score = 37.9 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++  I+  Y   GF  + +P + Y+  L           + +FS + + 
Sbjct: 314 FQPRGAHIYNTLMGFIKAEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYAENMFSFEAEK 372

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 373 -EKFALKPMNCPG 384


>gi|320100437|ref|YP_004176029.1| glycyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319752789|gb|ADV64547.1| glycyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 582

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 2/91 (2%)

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
              +  +   +   + L   G RA        + G +   AD    P A+         G
Sbjct: 492 PEHARIVEVARDIYRRLVKKGFRAI--YDDDGSIGRRYARADEVGVPFAVTVDYQTLEDG 549

Query: 444 MLQIKDLAKGKELSREIKNNESWREARVAQI 474
            + ++D     +    +   E +   +  + 
Sbjct: 550 TVTVRDRDTALQERVSVDRLEEYFLEKYGRQ 580


>gi|294501489|ref|YP_003565189.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351426|gb|ADE71755.1| threonyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 645

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 61/211 (28%), Gaps = 16/211 (7%)

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D EK   +     K     +   +EL    +     G  +         V+        +
Sbjct: 433 DTEKYFDDDAMWEKAQSMLKDAMDELD--LDYYEAEGEAAFYGPKLDVQVKTALGKEETL 490

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
               L F +        +               + +   +     S     +   ++  +
Sbjct: 491 STVQLDFLLPERFDLTYIGED----------GKQHRPVVIHRGVVSTMERFVAFLIEEYK 540

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +         V +  +      L   +   + L+ AGIR E+     +  G +++ A  
Sbjct: 541 GAFPTWLAPVQVQVIPVSPTV-HLEYAKEVQEQLQLAGIRVELD-SRDEKIGYKIREAQM 598

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           +  P  ++ G  E     + ++    G++ S
Sbjct: 599 QKIPYMLVVGDKEVEDKAVNVR--KYGEQNS 627



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+  + TP+L   +   K     +     +F  
Sbjct: 267 GLPLWLPKGATIRRIIERYIVDKEVSLGYQHVYTPVLGSVELY-KTSGHWEHYQDDMFPA 325

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D + + LR             +         +YR  P+   E     R+  
Sbjct: 326 MEMDNEDLVLRPMNCP-------HHMMVYKQGIHSYRELPIRIAELGTMHRYEM 372


>gi|227504970|ref|ZP_03935019.1| threonyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198420|gb|EEI78468.1| threonyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 687

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 9/116 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    +     +     LR  GIRA++     +    +++       P  +
Sbjct: 574 WLAPHQVVGIPVADEFSPHLEAIAAKLRKRGIRADVDTSDDR-MQKKIRNHTTGKVPFML 632

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELVST 484
           + G  +     +  + L  G +     +   I+   +W   R+ +   P  EL+S 
Sbjct: 633 LAGERDVDANAVSFRFL-DGSQVNGVPVDEAIELIAAWVAERINEQ--PNEELISA 685



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            GF         +R  + +  R  +   G+  + TP L   D   K     D    G+F
Sbjct: 285 SGFPVFHPNGAVVRMEMEEHSRRRHIQDGYSFVSTPHLTKGDLFKKS-GHLDFYADGMF 342


>gi|281420278|ref|ZP_06251277.1| threonine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405773|gb|EFB36453.1| threonine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 650

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 45/134 (33%), Gaps = 3/134 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +          Q   Q L   G+R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKFNDYAQKVRQYLDKQGVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A +    ++  G +++  + +  P  +I G  E + G++ ++    G++ +  ++     
Sbjct: 578 ALVD-DRNEKIGRKIRDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMSMEEFAQR 636

Query: 467 REARVAQITIPISE 480
             A VA+      E
Sbjct: 637 INAEVAEQLKAAEE 650


>gi|167586051|ref|ZP_02378439.1| prolyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 578

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 32/102 (31%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR    ++  +       +  
Sbjct: 97  KDRKDNEFVIGPTHEEVITDIARNQIRSYRQMPVNFYQIQTK 138


>gi|147835152|emb|CAN65677.1| hypothetical protein VITISV_002012 [Vitis vinifera]
          Length = 435

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ I DS + I+  +G+D + TP +  +D L K     D   + ++S 
Sbjct: 117 GLVFWHPKGAIVRHIIEDSWKKIHIEHGYDLLYTPHVARAD-LWKTSGHLDFYRENMYSQ 175

Query: 74  QDDDGQWISLRYDLTA 89
              + +   LR     
Sbjct: 176 ITIEDELYQLRPMNCP 191



 Score = 37.9 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           Q L+  GI+AE+   + + F   ++ ++++   L  + G  E    ++ ++    G+
Sbjct: 344 QQLKANGIQAEV--CNGERFPTLIRNSEKQRITLMAVVGPKEVETQIVTVRSRFGGE 398


>gi|332220153|ref|XP_003259222.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1
           [Nomascus leucogenys]
          Length = 718

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 52/463 (11%), Positives = 120/463 (25%), Gaps = 86/463 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +   + +F++Q   
Sbjct: 324 FLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL-FSTKLWEQSGHWEHYQEDMFAVQPPG 382

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                 R                                               D   + 
Sbjct: 383 SD----RP---------------------------------PSSQSDDSTRHITDTLALK 405

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G  +   RL   
Sbjct: 406 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGSLRGLTRLRCF 454

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + +   
Sbjct: 455 QQDDAHIFCTTDQLEAEIQ-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGDPCL 507

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 508 WDQAEQVLKQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 567

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +                 +Y G     +   +        + RL+  L         + 
Sbjct: 568 DL-----------------QYKGQAGALERPVLIHRAVLGSMERLLGVLAESCGGKWPLW 610

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                ++      ++     +   Q L+ AG+ +++   S      +++ A   +     
Sbjct: 611 LSPFQVVVI-PVGTEQEEYAREAQQSLQAAGLVSDLDADSGLTLSRRIRQAQLAHYNFQF 669

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 670 VVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 704


>gi|296446931|ref|ZP_06888867.1| tRNA synthetase class II (G H P and S) [Methylosinus trichosporium
           OB3b]
 gi|296255606|gb|EFH02697.1| tRNA synthetase class II (G H P and S) [Methylosinus trichosporium
           OB3b]
          Length = 378

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 9/122 (7%)

Query: 15  FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
             D  + E       LD+I   +   GF   E  +L+ +        ++ R    ++   
Sbjct: 6   TPDLESGEA------LDAILASFARAGFARCEPSILQPAGVFLDHSGEDFRGR--LYLTS 57

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
           D  G  + LR + T P+      +             GPVFR    G     +  Q  ++
Sbjct: 58  DAGGADLCLRPEYTIPVCLAYLASG-DAAQAASYAYGGPVFRYPGEGERGAGELRQAGLE 116

Query: 135 NV 136
           + 
Sbjct: 117 SF 118


>gi|163756231|ref|ZP_02163346.1| uracil phosphoribosyltransferase [Kordia algicida OT-1]
 gi|161323843|gb|EDP95177.1| uracil phosphoribosyltransferase [Kordia algicida OT-1]
          Length = 647

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/436 (9%), Positives = 112/436 (25%), Gaps = 82/436 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+++ + ++   +  G++ + +P                   K ++  
Sbjct: 261 GLPLWLPKGAALRSQLENFLKKAQQKAGYEMVISPH---------------IGQKELY-- 303

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                             +        +        ++  +  +
Sbjct: 304 --------------------------------VTSGHYAKYGEDSFQAINTPKEDEEFLL 331

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +                  L     +    +    +   L G+    G   DD     
Sbjct: 332 KPMNCPHHCEIYNTKPFSYKDLPKRYAEFGTVYRYEQS-GELHGLTRVRGFTQDDAHIFC 390

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  D+LD+     + L++    +    +FT   +L   +          +      
Sbjct: 391 TP-----DQLDQEFKNVIDLVMYVFESLGFDNFTAQVSLRDPEKP--------EKYIGST 437

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAILG 312
           E +E  +  I       EL  + E    + Y       +   + R  +  T    +    
Sbjct: 438 ENWEKAENAIINAAKEKELNYVIEYGEAAFYGPKLDFMVKDALGRSWQLGT---IQVDYN 494

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
            P   +         +             +   +    F      + + L+    +    
Sbjct: 495 LPERFDLTYKGSDNEL------------HRPVMIHRAPFGSMERFIAILLEHTGGNFPLW 542

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 ++  +    ++  K      +L    IRA++    ++  G +++ A+    P  
Sbjct: 543 LMTEQAILLPVSEKYENYGK--KVLTLLENHEIRAQID-NRNETVGKKIREAEMSKVPFM 599

Query: 433 IIQGTGERSRGMLQIK 448
           +I G  E   G + ++
Sbjct: 600 LIIGEQEEKDGTVSVR 615


>gi|99035129|ref|ZP_01314912.1| hypothetical protein Wendoof_01000242 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 536

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 81/291 (27%), Gaps = 7/291 (2%)

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I         D                   L G+ + +     D++  F     + SE I
Sbjct: 241 IFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGL-MRVRGFTQDDAHIFCMEEQVNSETI 299

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
                   +  E   +E+            G +E+   +E           +        
Sbjct: 300 KFCDLLKEVYSELGFNEISVKFSDRPDIRAGNDEVWDRAEKALLEAVKEAGLSYKLNPGE 359

Query: 298 GLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           G  Y     +   +AI         Q   +     G         +     +        
Sbjct: 360 GAFYGPKLEFVLKDAIGRNWQCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAILGTF 419

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              + + +++             + I T+ +++D        + +L+  G+R +  L + 
Sbjct: 420 ERFIGILIENYAGKFPVWLAPTQLAILTITNEAD--GYATEISNILKEQGVRVKTDLTNE 477

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           K    +++       P+  I G  E +   + +++L   ++ S  ++    
Sbjct: 478 K-ISYKIRLHSSNKVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKANE 527



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/254 (9%), Positives = 69/254 (27%), Gaps = 13/254 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N +   IR    N G+  ++TP+L   +   +     D+  + +F + + +
Sbjct: 166 WHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWERS-GHWDKFRENMFIVDESE 224

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++        +    +  +                 +                  
Sbjct: 225 NKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDD 284

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +     + ++        + +    ++                +I +   D+ + R    
Sbjct: 285 AHIFCMEEQVNSETIKFCDLLKEVYSELG------------FNEISVKFSDRPDIRAGND 332

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ +K  L+ VK      + +       G  L     D +         +    L E
Sbjct: 333 EVWDRAEKALLEAVKEAGLSYKLNPGEGAFYGPKLEFVLKDAIGRNWQCGTLQVDFILPE 392

Query: 258 LVKGTIAGEKGFNE 271
            +     G  G   
Sbjct: 393 RLGAFYIGADGHKH 406


>gi|322383766|ref|ZP_08057517.1| threonyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151978|gb|EFX44921.1| threonyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 649

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 67/258 (25%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I ++ E  G+  + TP+L   D   K     +   + +F  
Sbjct: 264 GLPLWLPNGATIRRTLERYIVDLEEKLGYQHVYTPVLANVDLY-KTSGHWEHYREDMFPP 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E     R+        
Sbjct: 323 MQLDNEELVLRPMNCP-------HHMMVYKNELHSYRDLPIRIAELGTMHRYEMSGALT- 374

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                 A T +        D ++    +       +     +     ++        ++ 
Sbjct: 375 GLHRVRAMTLNDAHIFCRPDQIKEEFARVITLIRQVYADFGITDYRFRLSYRDPQDTDKY 434

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +   +   + V+ L              G  L  +    +    ++   +   
Sbjct: 435 FPNDEMWEMSQRMLKEVVEELRLPYYEAEGEAAFYGPKLDVQIKTALKKEETLSTAQLDF 494

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  +    GE G   
Sbjct: 495 LLPERFELEYVGEDGQKH 512



 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 2/108 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +   S      +     L+ AGIR    L  ++  G +++ +     P  +
Sbjct: 543 WLCPVQAKILPVSSAFNDYAKEMEDRLKQAGIRVAADL-RNEKLGYKIRESQLEKVPFML 601

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI-PISE 480
           + G  E+  G   ++   +G                 +    + PISE
Sbjct: 602 VVGENEKQSGSFSVRRRGEGDLGVHSADALIQMIREEIDTKKVQPISE 649


>gi|312901397|ref|ZP_07760674.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|311291473|gb|EFQ70029.1| threonyl-tRNA synthetase [Enterococcus faecalis TX0470]
          Length = 626

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 9/107 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 282 SGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMADVELY-KTSGHWDHYHEDMFP 340

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
             D   G+ + LR             +         +YR  P+   E
Sbjct: 341 PMDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAE 380


>gi|294786915|ref|ZP_06752169.1| threonine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226550|ref|ZP_07868338.1| threonine--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|294485748|gb|EFG33382.1| threonine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120682|gb|EFT83814.1| threonine--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 687

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/148 (12%), Positives = 47/148 (31%), Gaps = 21/148 (14%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        + L+    +           +  +     SL   +     L    +R
Sbjct: 540 HRALFGSIERFFAILLEHYAGAFPAWLAPTQ--VLGVPVADSSLDYLKEVLDRLDENLVR 597

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            E+     + FG +++ A +   P  +I G  +R +G +  +    G +L+         
Sbjct: 598 TELDASDDR-FGKKIRNASKSKVPFILIVGDEDREKGAVSFR-FRDGSQLNG-------- 647

Query: 467 REARVAQITIPISELVSTVKKILQENKE 494
                    +P  + ++ + + +  + +
Sbjct: 648 ---------VPADQAIAWITEAIDSHAQ 666


>gi|187931393|ref|YP_001891377.1| prolyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|226701291|sp|B2SFQ6|SYP_FRATM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187712302|gb|ACD30599.1| prolyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 565

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 46/166 (27%), Gaps = 9/166 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++ +L  G        +++  +I + +R+     G   +  P +  S+ L +  
Sbjct: 26  MLKAGLIK-KLASGIYTWMPLGLKVLQKIQNIVRDEMNKAGASELLLPSILPSELLQE-T 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR----YVAENFDTIVFPCRTYRIGP 113
              D+    +  L D   +         +    +AR       +    +      +R   
Sbjct: 84  HRWDKFGPELLKLHDRHNRDFCYGPTHEEPIVDMARDTIKSYKQLPLNLYQIQTKFRDEI 143

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             R        F                     M     + L+ +G
Sbjct: 144 RPRFGVMRAREFIMKDAYSFHENSQCLRNTYNTMYATYCNILDKIG 189



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 29/103 (28%), Gaps = 3/103 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  ++++             Q L   GI   +    ++  G  
Sbjct: 459 DENGIIWPESIAPYQVAILPINYNKSDKVKEVADKLYQDLLGDGIDVLLDDRGAR-PGVM 517

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              AD       ++ G     +G+++ K+    ++    I   
Sbjct: 518 FADADLIGYSHHVVIGDKLLEQGLIEYKNRKTQEKQEITIAEL 560


>gi|71083600|ref|YP_266319.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|114152227|sp|Q4FM73|SYP_PELUB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71062713|gb|AAZ21716.1| proline-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 444

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 48/159 (30%), Gaps = 6/159 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   +R      G   I  P ++ SD   K     D  
Sbjct: 31  MIKQSSAGIYSWLPLGFKVMKKIEQIVREEQNKIGAQEILMPTIQPSDI-WKESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D  G+ +       +L   + R   +++ ++      Y I   FR+E     
Sbjct: 90  GDEMLRIKDRQGREMLYGPTNEELVTDIFRSSVKSYKSLPQL--LYHIQWKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
              +  +  + +  S     +             +   +
Sbjct: 148 GIMRGREFYMKDAYSFDVNDEDATFSYNKFFFSYLKTFK 186


>gi|134294675|ref|YP_001118410.1| prolyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166980110|sp|A4JBC2|SYP_BURVG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|134137832|gb|ABO53575.1| prolyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 578

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPIGLRSIRKVEAIVREEMNRAGALELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVITDIARNQIKSYRQMPVNFYQIQTK 138


>gi|311897171|dbj|BAJ29579.1| putative prolyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 586

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G         R+R RI+  +R   E  G      P L  ++ L +     +   + 
Sbjct: 34  QLAAGHYSLLPLAARVRARIVAVVREEMERIGAQEFLLPALHPAE-LWRRTGRWESMGEE 92

Query: 70  VFSLQDDDGQWISL 83
           +F L D  G   +L
Sbjct: 93  MFRLTDRKGAEQAL 106


>gi|225013012|ref|ZP_03703428.1| threonyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225002828|gb|EEG40808.1| threonyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 648

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 3/132 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + + L+    +         V I  +       +     +  L
Sbjct: 512 HRPVMIHRAPFGSLERFVAILLEHTGGNFPLWLMPNQVNILCVS--EKCKNYALKVSNFL 569

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
               IRA +    ++  G +++ ++    P  II G  E     + ++  ++G   S   
Sbjct: 570 ENHEIRALLD-DRNETIGKKIRESEISKVPYMIIIGEKEEENQTVSLRKHSEGDLGSFST 628

Query: 461 KNNESWREARVA 472
           ++        + 
Sbjct: 629 ESVVELINTEIK 640



 Score = 39.8 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 33/278 (11%), Positives = 74/278 (26%), Gaps = 13/278 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS- 72
           G      K   +R R+ + ++      G++ + +P +   +         ++     F  
Sbjct: 262 GLPLWLPKGAALRERLENFLKAAQNKAGYEQVISPHIGSKELYMTS-GHYEKYGADSFQP 320

Query: 73  LQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           +Q   +G+   L+             +   I             R  + G     +    
Sbjct: 321 IQTPAEGEEFLLKPMNCP--------HHCEIYNAKPWSYRDLPKRYAEFGTVYRYEQSGE 372

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                     T D      M   L+    K  D  + +      +    ++ L   +K  
Sbjct: 373 LHGLTRVRGFTQDDAHIFCMPSQLDDEFKKVIDLVLYVFGSLGFENFTAQVSLRDPEKPE 432

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           + +      +  ++  +   K    +   +       G  L     D +     +   + 
Sbjct: 433 KYIGSTHNWELAEQAIINAAKEKNLDYVIETGEAAFYGPKLDFMVKDALGRKWQLGTIQV 492

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
            + L E       G    NEL     + R    +  R 
Sbjct: 493 DYNLPERFDLNYKG--SDNELHRPVMIHRAPFGSLERF 528


>gi|332796370|ref|YP_004457870.1| glycyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694105|gb|AEE93572.1| glycyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 570

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 37/113 (32%), Gaps = 21/113 (18%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +    + +S+ +     ++    + +     S + G +   AD    P AI    
Sbjct: 465 VAVFPLLERDELISRAREIYSKVKE---KFDAIFDDSGSIGKRYARADEIGIPYAITVDP 521

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                  + I+D                       QI +   EL++T++K+  
Sbjct: 522 QTLQDNTVTIRDRDT------------------WNQIRVKEEELINTLEKLFS 556


>gi|307636813|gb|ADN79263.1| threonyl tRNA sythetase [Helicobacter pylori 908]
 gi|325995402|gb|ADZ50807.1| Threonyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 612

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 86/260 (33%), Gaps = 3/260 (1%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F     + SE +  ++ F    ++         +    A   G +E+   +
Sbjct: 354 EFTQDDAHIFCSFEQIQSE-VSAILDFTHKIMKAFDFSYEMELSTRPAKSIGDDEVWEKA 412

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
               K     +RI        G  Y      +         +     V  ++    +   
Sbjct: 413 TNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAF 472

Query: 337 LVSRFKGQNVPAT-GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
              R   +         +G     +A+ S     N    + P  I  +  + +       
Sbjct: 473 TNERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALK 532

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             + L+   I  E+   +  +   +++ A+++  P+ ++ G  E    +L I+D  K  +
Sbjct: 533 LKEELKKRDIFVEVLDKND-SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQ 591

Query: 456 LSREIKNNESWREARVAQIT 475
               +K   +  E+++ +++
Sbjct: 592 YKMPLKEFLNMVESKMQEVS 611



 Score = 50.6 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMKAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDEVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E+   E
Sbjct: 463 NLPERFKLAFTNERNHAE 480


>gi|147835150|emb|CAN65675.1| hypothetical protein VITISV_002010 [Vitis vinifera]
          Length = 342

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ I DS + I+  +G+D + TP +  +D L K     D   + ++S 
Sbjct: 116 GLVFWHPKGAIVRHIIEDSWKKIHIEHGYDLLYTPHVARAD-LWKTSGHLDFYRENMYSQ 174

Query: 74  QDDDGQWISLRYDLTA 89
              + +   LR     
Sbjct: 175 ITIEDELYQLRPMNCP 190


>gi|111225872|ref|YP_716666.1| prolyl-tRNA synthetase [Frankia alni ACN14a]
 gi|123337919|sp|Q0RBM4|SYP_FRAAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|111153404|emb|CAJ65160.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) [Frankia alni ACN14a]
          Length = 468

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 5/181 (2%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  + +         I   +   R          E ++G     +       G     
Sbjct: 177 LEVYRDFLTDVLAIPVFIGTKTRKERFAGATNTMTCEGMMGDGKALQMATSHELGQNFAR 236

Query: 332 GRY-----DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                                 +   +    ++                  V++  +  D
Sbjct: 237 AFDIDFLGADGAKHLAWTTSWGSSTRMVGGLIMAHGDDNGLRIPPRLAPTQVVVLPVRDD 296

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              ++K +     L  AG+R ++   S  +FG ++  A+ +  P+ +  G  + + G + 
Sbjct: 297 ETVVAKAREIAAALTDAGLRVQVDARSGLSFGRRVTDAEIKGIPVRVEVGPRDLAAGNVT 356

Query: 447 I 447
           +
Sbjct: 357 L 357


>gi|172040605|ref|YP_001800319.1| threonyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171851909|emb|CAQ04885.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 662

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 19/122 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    D     + +   LR  GIRAE+     +    +++   +   P  +
Sbjct: 548 WLAPHQVMGIPVAEDFTEYLEEFVADLRKDGIRAEVDTSDDR-MQKKIRTHTKGKIPFML 606

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  +   G +  +    G +++                  +P  E    +K+ + + +
Sbjct: 607 LVGGRDVENGAVSFR-FHDGTQVNG-----------------VPREEAAKAIKEWIGQRR 648

Query: 494 EE 495
            E
Sbjct: 649 NE 650



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            GF         +R  + +  R  +   G+  + TP +   D   K     D   +G+F
Sbjct: 259 SGFPVFHPNGGIVRLEMEEHSRRRHLASGYSFVNTPHITKGDLFQKS-GHLDFYAEGMF 316


>gi|152976185|ref|YP_001375702.1| prolyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189083487|sp|A7GRE9|SYP_BACCN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152024937|gb|ABS22707.1| prolyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 566

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   IR   E  G   +  P L+ ++ L +           
Sbjct: 34  QNASGIYSFLPLGLKVLHKVEHIIREEMERAGAVELLMPALQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNDREFAL 106



 Score = 42.1 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 35/108 (32%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD      +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDVQREVAENIYTSLQEQGYEVLLDDRTERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A  +    ++++  ++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATNESAEVKVEDLHTYIAD 563


>gi|312984108|ref|ZP_07791455.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310894462|gb|EFQ43537.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 644

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 500 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPIQAEIIPVNNDAHGEY 559

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   Q L   G R E+    ++  G +++ +  +  P  ++ G  E   G + ++    
Sbjct: 560 AEKVRQELAKRGFRVEVD-NRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYGT 618

Query: 453 GKELSREIKNNESWREA 469
            +E+S+ + +  +  +A
Sbjct: 619 DEEISKSLTDFINEIDA 635



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYRDDMF 316

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 317 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 376

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                +T  A++  ++ D  +   I    + +   + K  D       
Sbjct: 377 REMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDE 436

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 437 MWERSQKM 444


>gi|257467995|ref|ZP_05632091.1| threonyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062281|ref|ZP_07926766.1| threonine-tRNA ligase [Fusobacterium ulcerans ATCC 49185]
 gi|313687957|gb|EFS24792.1| threonine-tRNA ligase [Fusobacterium ulcerans ATCC 49185]
          Length = 637

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 50/126 (39%), Gaps = 4/126 (3%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +    +      + + ++    +         V I T++   + +   +   +
Sbjct: 501 EKHRPVMIHRVVYGSIERFIGILIEHFAGAFPLWLAPTQVKILTIN--DEVVPYAKEIFK 558

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            L+  GIRAE+    +++ G +++ A+ +   P+ +I G  E     + I+     ++ S
Sbjct: 559 ALQERGIRAEID-DRAESIGYKIREANGKYKVPVQLILGKNEVENREVNIRKFGSQQQES 617

Query: 458 REIKNN 463
            ++   
Sbjct: 618 MKLDEF 623



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN ++D  R  +   G+  I TP++   + L +         + +++ 
Sbjct: 260 GFPIFLPKGMVIRNTLIDLWRREHTLAGYQEITTPIMLNKE-LWEISGHWFNYRENMYTS 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 319 TI-DETEFAIKPMNCPG 334


>gi|238620156|ref|YP_002914982.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|238381226|gb|ACR42314.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 574

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 8/169 (4%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-SIGISRLIVALKSLE 366
           E ++   V  + +    F S+                  P+ G        ++ A +  E
Sbjct: 392 EQMIRNNVTIDGKPLGEFISIVEREEKVHGEHFIPHVVEPSFGVERTLFLTILSAYREKE 451

Query: 367 ----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                S         + +  +    + + K     + L     + E+    S + G +  
Sbjct: 452 GRVLLSLPRHLAPYDIAVFPLLEREELIRKSMEIRENLSE---KYEVLYDDSGSIGRRYA 508

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            AD    P AI           + I+D    K++  +I + +   E   
Sbjct: 509 RADEIGIPFAITVDPQTLLDNSVTIRDRDSWKQVRVKIDDLKISLEKLF 557


>gi|227830651|ref|YP_002832431.1| glycyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579559|ref|YP_002837958.1| glycyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229581777|ref|YP_002840176.1| glycyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|284998179|ref|YP_003419946.1| glycyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|227457099|gb|ACP35786.1| glycyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228010274|gb|ACP46036.1| glycyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228012493|gb|ACP48254.1| glycyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|284446074|gb|ADB87576.1| glycyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 574

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 8/169 (4%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-SIGISRLIVALKSLE 366
           E ++   V  + +    F S+                  P+ G        ++ A +  E
Sbjct: 392 EQMIRNNVTIDGKPLGEFISIVEREEKVHGEHFIPHVVEPSFGVERTLFLTILSAYREKE 451

Query: 367 ----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                S         + +  +    + + K     + L     + E+    S + G +  
Sbjct: 452 GRVLLSLPRHLAPYDIAVFPLLEREELIRKSMEIRENLSE---KYEVLYDDSGSIGRRYA 508

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            AD    P AI           + I+D    K++  +I + +   E   
Sbjct: 509 RADEIGIPFAITVDPQTLLDNSVTIRDRDSWKQVRVKIDDLKISLEKLF 557


>gi|328953980|ref|YP_004371314.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454304|gb|AEB10133.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 640

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +     +        + L+   +R E  L  ++  G +++ A  +  P  I
Sbjct: 536 WLAPVQAIILPVTDRAHPFALDVARRLQAEELRVETDL-RNEKLGLKIREAQLQKIPYMI 594

Query: 434 IQGTGERSRGMLQIKDLAKGKEL 456
           I G  E +   L ++ L  G E+
Sbjct: 595 IIGDREVAAQTLSVRRL-DGTEI 616


>gi|307294661|ref|ZP_07574503.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306879135|gb|EFN10353.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 660

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/450 (10%), Positives = 119/450 (26%), Gaps = 69/450 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R   +  G+  ++TP +  +    +      +  + +F +
Sbjct: 266 GSVFWHPKGYLIWRELEAYMRRAIDEAGYREVKTPQVMDARQ-WEQSGHWGKYRENMFVI 324

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D+                                    P   +E         ++    
Sbjct: 325 PDE-----------------------------------VPNVEDEGPLVSEAADWMA--- 346

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +      A   +      +   + ++   Y  G  +R    G L  +      +  + 
Sbjct: 347 --LKPMNCPAHILIFKQGIKSYRDLPLRF--YENGCCHRNEPHGALHGLMRV--RQFTQD 400

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +      ++    L      D    ++    L  E+     +    D  +   
Sbjct: 401 DAHIFCREDQIVEEVRAFCALADRIYKDFGFTYSIKLALRPEK--RFGTEEMWDKAEEEL 458

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                  G    E G+ EL                  ++  I R  +  T      +   
Sbjct: 459 RNAVAAAGLNTPEYGWEELPGEG----AFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPER 514

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
              +   +                  R +   +    F      + + ++          
Sbjct: 515 LDASYVGEDG---------------ERHRPVMLHRAIFGSYERFIGILIEHYAGKFPLWL 559

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                ++ T+  D+D     Q   + LR  GIRAE  +  ++    +++       P  +
Sbjct: 560 APVQAVVATIVSDAD--DYAQTVAEKLRAVGIRAETDV-RNEKINYKVREHSLAKVPNLL 616

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           + G  E   G + +++L K  +    +++ 
Sbjct: 617 VVGRREADEGTVALRELGKEGQTILSVEDV 646


>gi|149276293|ref|ZP_01882437.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp.
           BAL39]
 gi|149232813|gb|EDM38188.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp.
           BAL39]
          Length = 641

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/108 (11%), Positives = 34/108 (31%), Gaps = 3/108 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + V ++    +              +          +  +  L
Sbjct: 512 HRPVMIHRAPFGSLERFIAVLIEHCAGNFPLWLSPEQ--FIILPISEKYEDYAKKVSDEL 569

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             + IR  +     +  G +++ A+ +  P  +I G  E + G + ++
Sbjct: 570 NNSDIRGLIDF-RDEKIGRKIRDAEVKKIPYMLIIGEKEMAEGKVSVR 616



 Score = 37.9 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 3/78 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R R++  +       G++ + TP + + +         ++  K  F  
Sbjct: 262 GLPLWLPKGAALRERLVQFLTRAQAKSGYEQVVTPHIGHKNLYITS-GHYEKYGKDSFQP 320

Query: 74  QD--DDGQWISLRYDLTA 89
                +G+   L+     
Sbjct: 321 IKTPQEGEEFFLKPMNCP 338


>gi|12847465|dbj|BAB27580.1| unnamed protein product [Mus musculus]
          Length = 374

 Score = 55.6 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 19/196 (9%)

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLI 359
           Y        I  F   +++++ VV   +  GGRYD L+ +F+G         ++G+S  I
Sbjct: 44  YKVQQHTGIIFQFLAFSKRRQRVVPEILAAGGRYDLLIPKFRGPQTVGPVPTAVGVSIAI 103

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             + +   +      +    +  +     S+S+    TQ L TAGI AE+    S++   
Sbjct: 104 DKIFAAVLNMEEPVTVSSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEE 163

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
             +Y          +    E S   +++K                S+ + R  +  +  S
Sbjct: 164 LQEYCRHHEITYVALVSDKEGS--HVKVK----------------SFGKERQTEKRVLES 205

Query: 480 ELVSTVKKILQENKEE 495
           +LV  V + L+    +
Sbjct: 206 DLVDHVMQKLRTKVGD 221


>gi|256826891|ref|YP_003150850.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium
           curtum DSM 15641]
 gi|256583034|gb|ACU94168.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium
           curtum DSM 15641]
          Length = 586

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 48/126 (38%), Gaps = 3/126 (2%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     + + + + +      + P+ +  +          +     LR AG+R ++
Sbjct: 462 RAGFGSFERFIGMLTEQYAGKFPTWLSPLQVKVLPVSEKHREYSRQIADKLRQAGVRVKV 521

Query: 410 FLGSSKNFGNQLKYADRRN-CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                +  G +++ A   +  P  +I G  E   G + ++D    + + R + +  +  +
Sbjct: 522 D-ERDEKIGYKIREARSVDRVPYMLILGEVEEEAGNISVRD-RSNETVQRSLDDFITDIQ 579

Query: 469 ARVAQI 474
           A +++ 
Sbjct: 580 AEISER 585



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       +R++N +      + E YG++ ++TP++  S  L +     D   + +++ 
Sbjct: 213 GFPFWLPNGMRLKNALTQYWMEMQEAYGYEQVDTPII-LSRKLWETSGHWDHYKENMYTT 271

Query: 74  QDDDGQWISLRYDLTAPLA 92
              D +  +++        
Sbjct: 272 VI-DDEDYAVKPMNCPGAC 289


>gi|171316236|ref|ZP_02905459.1| prolyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171098650|gb|EDT43447.1| prolyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 578

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 35/132 (26%), Gaps = 23/132 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M +D               L  AGI   +     +  G  
Sbjct: 463 DDRGIIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAELTAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT-IPIS 479
               +    P  ++ G      G +                    ++  R A+ T +P  
Sbjct: 522 FADWELIGVPHRLVIGERGLKEGKI-------------------EYQGRRDAEATLLPAD 562

Query: 480 ELVSTVKKILQE 491
           E  +TV + ++ 
Sbjct: 563 EAAATVTEKIRA 574


>gi|182420015|ref|ZP_02951249.1| prolyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237666786|ref|ZP_04526771.1| proline--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376052|gb|EDT73639.1| prolyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657985|gb|EEP55540.1| proline--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 570

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     +++   + D +R      G        +  ++ L +     D  
Sbjct: 31  MIRKMAAGIYNYMPLGLKVLKNVEDIVREEMNAAGAQEFLASAMIPAE-LWQESGRWDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +F ++D   +   L     ++   +AR   +++  +       +  
Sbjct: 90  GAEMFRVKDRGARDFCLGPTHEEVFTDIARNEIKSYKQLPLNLYQIQTK 138


>gi|82777067|ref|YP_403416.1| threonyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123755748|sp|Q32FI0|SYT_SHIDS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81241215|gb|ABB61925.1| threonine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 642

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 92/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++     +  S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKELGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|73919796|sp|Q5UX65|SYT_HALMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 642

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 66/241 (27%), Gaps = 6/241 (2%)

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
              +DI++  L         +     + ++ G++ + +     E V           +  
Sbjct: 398 LATVDIILDTLDTFNLDYTVQFATRPEKSVGGDEIWEKAESQLESV--LEEQDIDYVVEE 455

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
                        +E  LG        +            Y G  +      +       
Sbjct: 456 GDGAFYGPKIDFAFEDALGRHWDGPTVQLDFNMPERFDLSYTGEDNEEHRPVMIHRALYG 515

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
              R  + L    +       + P  I  +    D+++  +     L     R  +    
Sbjct: 516 SYERFFMVLTEHYNGKFP-PWLAPEQIRLLPVSDDNITYCEEIQDELDD--FRVTIE-DR 571

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           S   G +++ A     P   + G  E   G + ++D  + +E   +I       E  V Q
Sbjct: 572 SWTVGKKIQQAHDDRVPYMCVIGDNEEEAGTISVRDRKEREEKDIDIAEFRDHLETEVEQ 631

Query: 474 I 474
            
Sbjct: 632 Q 632



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 51/164 (31%), Gaps = 8/164 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +I N + D +  +  + G+D +ETP +  ++ L K     +     +F L
Sbjct: 262 GLPLYEPNGKKILNELSDYVAGLNRDAGYDEVETPHVFRTE-LWKKSGHYENYVDDMF-L 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ-----F 128
            D + +   L+       A    +N  +                 K   G          
Sbjct: 320 LDVNDEEYGLKPMNCPGHATIFEQNSWSY-RDLPVRYFEDGKVYRKEQRGELSGLSRTWA 378

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
              D  ++    +  + E+   +   L+ +     DY +    R
Sbjct: 379 FTIDDGHLFVRPDQIEEEVLATVDIILDTLDTFNLDYTVQFATR 422


>gi|332878463|ref|ZP_08446184.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683558|gb|EGJ56434.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 647

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/435 (11%), Positives = 111/435 (25%), Gaps = 31/435 (7%)

Query: 51  EYSDSLGKFLPDEDR-PNKGV--FSLQDDDGQWISLR---YDLTAPLARYVAENFDTIVF 104
           EY   L +    + R   K +  F   +  G+   L       TA   R   E+F   + 
Sbjct: 231 EYLTLLEEAKKRDHRKIGKEMELFMFSERVGK--GLPMWLPKGTA--LRLRLEDFLKKIQ 286

Query: 105 PCRTYRIGPVFR----NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
               Y+          N     G +  + +     + +     +  +  M       +  
Sbjct: 287 KRYGYQQVMTPHIGGKNLYVTSGHYAHYGKDSFQPIHTPEADEEYMLKPMNCPHHCEIYA 346

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
            +   +  +  R    G + +    G+     R+      D         VK        
Sbjct: 347 WKPRSYKDLPLRIAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFIRVM- 405

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
                   GA L  +  +  +S    +  +      E+ +                   +
Sbjct: 406 -EIIQIIFGA-LNFDTFEAQISLRDPNNREKYIGSDEVWEEAENA--IIEACKEKGLNAK 461

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                +         +             I     + E+ K    G             +
Sbjct: 462 VEYGEAAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFKLEYTGEDN---------QK 512

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F        V ++              V I  +          Q      
Sbjct: 513 HRPVMIHRAPFGSMERFCAVLIEHTAGHFPLWLTPDQVAILPIS--EKFNDYAQKLCAYF 570

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
               +RA +    ++  G +++  + +  P  +I G  E + G + ++   +G + S + 
Sbjct: 571 DEQDVRAIVD-DRNEKIGRKIRDNEMKRIPYMLIVGEKEAADGTVSVRKQGEGDQGSMKF 629

Query: 461 KNNESWREARVAQIT 475
           ++        V  +T
Sbjct: 630 EDFAKKINEEVRNMT 644



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL 50
           +G      K   +R R+ D ++ I + YG+  + TP +
Sbjct: 262 KGLPMWLPKGTALRLRLEDFLKKIQKRYGYQQVMTPHI 299


>gi|325997000|gb|ADZ49208.1| Threonyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 573

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 86/260 (33%), Gaps = 3/260 (1%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F     + SE +  ++ F    ++         +    A   G +E+   +
Sbjct: 315 EFTQDDAHIFCSFEQIQSE-VSAILDFTHKIMKAFDFSYEMELSTRPAKSIGDDEVWEKA 373

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
               K     +RI        G  Y      +         +     V  ++    +   
Sbjct: 374 TNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAF 433

Query: 337 LVSRFKGQNVPAT-GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
              R   +         +G     +A+ S     N    + P  I  +  + +       
Sbjct: 434 TNERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALK 493

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             + L+   I  E+   +  +   +++ A+++  P+ ++ G  E    +L I+D  K  +
Sbjct: 494 LKEELKKRDIFVEVLDKND-SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQ 552

Query: 456 LSREIKNNESWREARVAQIT 475
               +K   +  E+++ +++
Sbjct: 553 YKMPLKEFLNMVESKMQEVS 572



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 199 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 256

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 257 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 316

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 317 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMKAFDFSYEMELSTRPAKS 363

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 364 IGDDEVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 423

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E+   E
Sbjct: 424 NLPERFKLAFTNERNHAE 441


>gi|308061413|gb|ADO03301.1| threonyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 612

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 50/120 (41%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +  +      + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHRAFALKLKEELKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVGTEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEHNHAE 480


>gi|295396369|ref|ZP_06806535.1| proline--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970809|gb|EFG46718.1| proline--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 609

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 37/119 (31%), Gaps = 1/119 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V I     D+      +  T  +  AG    +      + G +  
Sbjct: 487 DDKGLVWPANLAPADVHIVATGKDAQVFDVAEELTAEVEKAGYTVLLDDRPKVSPGMKFG 546

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
            A+    P  ++ G      G+++++D A G+  +  +          +A+    I+ +
Sbjct: 547 DAELLGMPTIVVVG-RGLKDGVVELRDRATGETTNLPVDTAGQKIVDAIAEKLDAINNI 604



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R   P G        +R+ +++   +R+     G   +  P L  ++   K     +  
Sbjct: 34  IRRSAP-GIYTWLPLGLRVLDKVEAIVRDEMSKAGSQEVHFPALLPAEPYEKS-GRWEAF 91

Query: 67  NKGVFSLQDDDGQWISLRY 85
            +G+F LQD       L  
Sbjct: 92  GEGIFRLQDRKKADYLLAP 110


>gi|242242837|ref|ZP_04797282.1| glycyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233738|gb|EES36050.1| glycyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 463

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/219 (9%), Positives = 51/219 (23%), Gaps = 4/219 (1%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E    +  +    +  +                   K            +   ++     
Sbjct: 248 EWLTDLNISEDNMRLRDHDEDELSHYSN-ATTDIEYKFPFGWGELWGIASRTDFDLRQHS 306

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               E  K     +      Y    S    +   A          +   K   +  +   
Sbjct: 307 EHSGEDFKYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYAEEGVEGSKDARTVMHFHP 366

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P     +       S+     + L +      +    S++ G + +  D    P  I
Sbjct: 367 ALAPYKAAVLPLSKKLSSEAIKIFEQLSS---SFAIDFDESQSIGKRYRRQDEIGTPYCI 423

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + ++D    +++   I   E++   +V 
Sbjct: 424 TFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLADKVK 462


>gi|160900913|ref|YP_001566495.1| prolyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|226699138|sp|A9BP65|SYP_DELAS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160366497|gb|ABX38110.1| prolyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 581

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/115 (9%), Positives = 45/115 (39%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++ +L  G  +     +R+  ++   +R      G   +  P+++ ++ + +  
Sbjct: 26  MTRAGLIK-KLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVEVTMPVVQPAE-MWEET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              ++    +  ++D  G+   ++    ++   +AR   +++  +       +  
Sbjct: 84  GRFEKMGPELLRIKDRHGRDFVIQPTSEEVVTDIARQELKSYKQLPKNFYQIQTK 138


>gi|71892071|ref|YP_277801.1| prolyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|114152172|sp|Q493B4|SYP_BLOPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71796177|gb|AAZ40928.1| prolyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 581

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +R+  +I + IR      G   I  P+++ +  L K           +  
Sbjct: 37  SGLYTWLPTGLRVLRKIENIIREEMSKIGAIEIAMPIVQPAR-LWKKSGRWTGYGTELLR 95

Query: 73  LQDDDGQWISLRY 85
            ++ + Q   L  
Sbjct: 96  FKNRNNQEFVLGP 108


>gi|269216980|ref|ZP_06160834.1| threonine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129787|gb|EEZ60871.1| threonine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 587

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       +R++N ++    ++ + YG++ ++TP++  + SL +     D   + +++ 
Sbjct: 213 GFPFWLPNGMRLKNSLMQYWMDMQDAYGYEQVDTPII-LNKSLWETSGHWDHYKENMYTT 271

Query: 74  QDDDGQWISLRYDLTAPLA 92
           +  DG+  +++        
Sbjct: 272 EI-DGEEYAVKPMNCPGAC 289



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 47/128 (36%), Gaps = 7/128 (5%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     + + + + +      + P  +  +          +     LR AGIRA++
Sbjct: 462 RAGFGSFERFIGMLTEQYAGKFPTWLSPCQVKVLPVSEKHREYARGVYDALRAAGIRAKL 521

Query: 410 FLGSSKNFGNQLKYADRRNC---PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
                +  G +++ A  R     P  +I G  E + G + ++D    + + R++    + 
Sbjct: 522 D-ERDEKIGYKIREA--RGIDRVPYMLILGEKEENAGNISVRD-RSNETVERDLGEFIAD 577

Query: 467 REARVAQI 474
             A + + 
Sbjct: 578 VTAEIEER 585


>gi|238879230|gb|EEQ42868.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida albicans
           WO-1]
          Length = 455

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/459 (10%), Positives = 113/459 (24%), Gaps = 93/459 (20%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++  ++N    YGF  + TPL+ +   L K     D     +F +    
Sbjct: 55  FLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLI-FKTKLWKKSGHWDNYKDDMFKVV--- 110

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G  I+                                          +   I+     + 
Sbjct: 111 GNDIT---------------------------------------KEEYTDNIEEHEYGLK 131

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                +   +      + + + ++ +D+     +R    G L  +        ++  I  
Sbjct: 132 PMNCPSHCMIFAKFDRSYQELPVRYSDFSS--LHRNEASGALSGLTRVRRFHQDDGHIFC 189

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
             +D++D      ++L+          +              +  +LS   E       E
Sbjct: 190 S-MDQIDGEIKNTLELIKDTYNVFGINE--------------IEFYLSTRPEDKFIGEIE 234

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                 +  K                 +         ++    +        I     + 
Sbjct: 235 TWDIAESQLKNVLNSTAGEGNWATREGDGAFYGPKIDVLLKDAFNKKHQVGTIQLDFQLP 294

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
            + +    G  G            +   V    F        + L   +           
Sbjct: 295 NRFELKYVGEDGKRDH--------QPILVHRAVFGSLERFFAILLDHYQGKWPFWINPRQ 346

Query: 378 VLITTMDHDSDSLSKYQMYTQMLR-------TA-------GIRAEMFLGSSKNFGNQLKY 423
            LI  ++     +   +   + L         A           ++     +  G + K 
Sbjct: 347 ALIVPIN--ESHVPVAEELQKKLSGDIVSCDNAIAPLTGFNFHVDID-KRGETVGARTKD 403

Query: 424 ADRRNCPLAIIQGTGERSRGML--------QIKDLAKGK 454
           A ++     I+ G  + + G          +IK++   +
Sbjct: 404 AIQKGYSYLIMIGDKDIANGTFAVRSRDDRKIKNMTSDE 442


>gi|209549439|ref|YP_002281356.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|238065117|sp|B5ZQK2|SYT_RHILW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|209535195|gb|ACI55130.1| threonyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 668

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/367 (11%), Positives = 102/367 (27%), Gaps = 18/367 (4%)

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
              +      +       +       +  G      +    +  A  +     K  D  +
Sbjct: 280 VSYMRRRLAVDYEEVNAPQVLDTALWETSGHWGWYQENMFAVKSAHAMTHPEDKEADNRV 339

Query: 168 G----INNRKILDGILEKIGLHGDDKLNERLIVL--RAIDKLDKFGLQGVKLLLGEGRTD 221
                +N    +      +  + +  +      L  R        GL  V+    +    
Sbjct: 340 FALKPMNCPGHVQIFKHGLKSYRELPIRLAEFGLVHRYEPSGALHGLMRVRGFTQDDAHI 399

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
              D    A        I+  +     ++ + +L    +  +  +  ++    +   V K
Sbjct: 400 FCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDALWDRAEAVMTDVLK 459

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
           +    +  +I + I+ G   + G  +E  L   +  E Q            R+       
Sbjct: 460 TIEAQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDS 519

Query: 342 KGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
             +            G     + +     + +    + P+ +      S++ +      +
Sbjct: 520 NSEKTQPVMIHRAICGSMERFLGILIENFAGHLPLWVSPLQVVVATITSEADAYGLEVAE 579

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRR----NCPLAIIQGTGERSRGMLQIKDLAKGK 454
            LR AG+  E    + K     + Y  R       P+ I+ G  E     + I+ L    
Sbjct: 580 ALREAGLNVETDFRNEK-----INYKVREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQD 634

Query: 455 ELSREIK 461
           ++S  + 
Sbjct: 635 QVSMGLD 641


>gi|167767684|ref|ZP_02439737.1| hypothetical protein CLOSS21_02219 [Clostridium sp. SS2/1]
 gi|167710701|gb|EDS21280.1| hypothetical protein CLOSS21_02219 [Clostridium sp. SS2/1]
 gi|291560818|emb|CBL39618.1| glycyl-tRNA synthetase, dimeric type [butyrate-producing bacterium
           SSC/2]
          Length = 462

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/228 (7%), Positives = 59/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +            +       + + + +  ++   + ++       +    +        
Sbjct: 237 EWFEYWKNYCINWLQTLGIKEDEMRVRDHEKEELSHYSKATSDIEFMFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +       +       +  +      ++ A   ++         + LE   
Sbjct: 297 RTDYDLTQHQNTSGEDLTYFDDVNKERYIPYVIEPSLGADRVTLAFLCSAYDEEELEGGD 356

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + PV I  +              + L       E       N G + +  
Sbjct: 357 TRTVLHFHPALAPVKIGILPLSKKLSDGAMKVYEEL-AKEYNCEFD--ERGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + ++D    ++   +I++ +++   + A
Sbjct: 414 DEIGTPYCVTFDFDSLEDGAVTVRDRDTMEQERVKIEDLKAYFAEKFA 461


>gi|93005293|ref|YP_579730.1| prolyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|114152235|sp|Q1QDK7|SYP_PSYCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|92392971|gb|ABE74246.1| prolyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 572

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G        +R+  ++   +R   +N G   +  P+ + ++ L +     +     
Sbjct: 34  KIASGLYIWLPMGLRVLQKVERIVREEMQNIGAQEVLMPMTQPAE-LWQLTGRFNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +   +D   +   L  
Sbjct: 93  LLRFKDRHDRDFVLGP 108


>gi|192360042|ref|YP_001982990.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692463|sp|B3PL16|SYT_CELJU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190686207|gb|ACE83885.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 642

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  +I   +R    ++G+  + TPL+     L +     +   + +F+ 
Sbjct: 262 GMVFWHPKGWTLWQQIEQYMRAKQNDWGYQEVRTPLIMDR-VLWEKSGHWENYRENMFT- 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY--RIGPVFRNEKHGPGR 124
            + + +  +++        +    +               G   RNE  G   
Sbjct: 320 TESEKRDFAVKPMNCPGHVQIF-NHGLRSHKDLPLRLAEFGSCHRNEASGALH 371



 Score = 41.0 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +   +         +   + LR  GIR    L  ++  G +++    +  P  +
Sbjct: 536 WLSPVQVVVANITDSQAEYVKRVEKALREQGIRVIADL-RNEKIGFKIREHTIQRVPYLL 594

Query: 434 IQGTGERSRGMLQIK 448
           + G  E     L ++
Sbjct: 595 VVGDKEVENQSLAVR 609


>gi|172059576|ref|YP_001807228.1| prolyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|226699123|sp|B1YSV1|SYP_BURA4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|171992093|gb|ACB63012.1| prolyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 578

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 35/132 (26%), Gaps = 23/132 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M +D               L  AGI   +     +  G  
Sbjct: 463 DDRGIIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAELAAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT-IPIS 479
               +    P  ++ G      G +                    ++  R A+ T +P  
Sbjct: 522 FADWELIGVPHRLVIGERGLKEGKI-------------------EYQGRRDAEATLLPAD 562

Query: 480 ELVSTVKKILQE 491
           E  +TV + ++ 
Sbjct: 563 EAAATVTEKIRA 574


>gi|72080917|ref|YP_287975.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|71914041|gb|AAZ53952.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 579

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/250 (10%), Positives = 73/250 (29%), Gaps = 10/250 (4%)

Query: 225 DFTKGANLTSEQID--IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           + +    + SE +D   +  F     ++      +  +     E+   +L    +  + +
Sbjct: 336 EISHLFQMISEVLDFFKVQIFYISFSKRDPKNKDKFFQDDQMWEQAEADLKQFLDQNKIN 395

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
                +I  ++     +++         L    +           +     ++   +   
Sbjct: 396 --YIEKIGEAAFYGPKIDFQVKTALNKELTISTLQLDFLLPEKFKISFINEHNKKETPIL 453

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
                     IG     +AL   +S  N    + P  I  +          Q   ++L  
Sbjct: 454 IH-----RGLIGTYERFIALLLEQSKGNLPFWISPKQIIVIPVAEKHNDFAQKIHKILFD 508

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            G  +E+ L S +    +++ A+       +I G  E ++  +  +     +     + +
Sbjct: 509 LGFNSEIDLRSER-ISRKIREANLEKINFQVIIGDEEIAKNEITYRKFGSPELFRISLVD 567

Query: 463 NESWREARVA 472
                +    
Sbjct: 568 FVDLLKNSEK 577


>gi|170699968|ref|ZP_02890995.1| prolyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170135116|gb|EDT03417.1| prolyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 578

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 35/132 (26%), Gaps = 23/132 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M +D               L  AGI   +     +  G  
Sbjct: 463 DDKGIIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAELAAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT-IPIS 479
               +    P  ++ G      G +                    ++  R A+ T +P  
Sbjct: 522 FADWELIGVPHRLVIGERGLKEGKI-------------------EYQGRRDAEATLLPAD 562

Query: 480 ELVSTVKKILQE 491
           E  +TV + ++ 
Sbjct: 563 EAAATVTEKIRA 574


>gi|115350544|ref|YP_772383.1| prolyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122324080|sp|Q0BIH4|SYP_BURCM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|115280532|gb|ABI86049.1| prolyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 578

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 35/132 (26%), Gaps = 23/132 (17%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M +D               L  AGI   +     +  G  
Sbjct: 463 DDKGIIWPESIAPFEVVLCPMGYDRSDMVREAADKLYAELAAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT-IPIS 479
               +    P  ++ G      G +                    ++  R A+ T +P  
Sbjct: 522 FADWELIGVPHRLVIGERGLKEGKI-------------------EYQGRRDAEATLLPAD 562

Query: 480 ELVSTVKKILQE 491
           E  +TV + ++ 
Sbjct: 563 EAAATVTEKIRA 574


>gi|71064999|ref|YP_263726.1| prolyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|114152234|sp|Q4FUL6|SYP_PSYA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71037984|gb|AAZ18292.1| prolyl-tRNA synthetase, class IIa [Psychrobacter arcticus 273-4]
          Length = 572

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G        +R+  ++   +R   +N G   +  P+ + ++ L +     +     
Sbjct: 34  KIASGLYIWLPMGLRVLQKVERIVREEMQNIGAQEVLMPMTQPAE-LWQMTGRFNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +   +D   +   L  
Sbjct: 93  LLRFKDRHDRDFVLGP 108


>gi|116688611|ref|YP_834234.1| prolyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|170731910|ref|YP_001763857.1| prolyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|152016591|sp|A0K4B4|SYP_BURCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699124|sp|B1JVA5|SYP_BURCC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116646700|gb|ABK07341.1| prolyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|169815152|gb|ACA89735.1| prolyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 578

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138


>gi|34763883|ref|ZP_00144787.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886346|gb|EAA23617.1| Prolyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 411

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/335 (11%), Positives = 103/335 (30%), Gaps = 34/335 (10%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +   ++ + + + +  +  +          D++    ++G    + E +  N  + 
Sbjct: 98  VHTPDCPTIESLAKYLDVPLERTVKALTYKDMGTDEIYLVLIRG-DFEVNEVKLKNILNA 156

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL---VVISELVRKSG 283
            +    T E+I+ +           +    ++V   ++  +  N +          +   
Sbjct: 157 VEVEMATDEEIEKLGLKKGYIGPYKLPTKIKIVAD-LSVPEISNHIVGSHQKDYHYKNVN 215

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG---GGGRYDGLVSR 340
           Y  +        +R  +    C+    L      E  +    G          Y     +
Sbjct: 216 YGRDYTADIVADIRTAKVGENCIIGGKLHSARGIECGQIFKLGDKYSKAMNATYLDENGK 275

Query: 341 FKGQNVPATGFSIGISRLIVALKSLE-----SSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
            +   +   G  +    +  A++            +I      +I     +   +S  + 
Sbjct: 276 TQYMLMGCYGIGV-TRTMAAAIEQNNDENGIIWPVSIAPYTVDVIPANIKNEVQVSLAEK 334

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
               L    I A +     +  G + K AD    P  I+ G      G++++K    G+ 
Sbjct: 335 IYNELEEEKIDAMLD-DRDEKPGFKFKDADLIGFPFKIVVGKR-ADEGIVELKIRRTGE- 391

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                             + +P +E+++ +K++++
Sbjct: 392 -----------------TLELPQNEIIAKIKELMK 409


>gi|317010401|gb|ADU84148.1| threonyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 612

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHGFALKLKEELKKCDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    ML I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVETEMLSIRDREKQTQYKMPLKEFLNMVESKMQEVS 611



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 68/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMKAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K      + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHHINYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEHNNAE 480


>gi|223040968|ref|ZP_03611229.1| prolyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222877765|gb|EEF12885.1| prolyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 570

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 4/98 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      R+   I + ++   +  G   I    +  +D L +     D   K +  
Sbjct: 37  SGLYNFLPLGKRVLENIKNIVKEELDEAGAQEISMSFVTSAD-LWRESGRFDVYGKELLR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
            +D       L     +    L R    ++  +     
Sbjct: 96  FKDRKENDFVLSPTNEESVVALVRGKVTSYKQLPLNLY 133



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 44/127 (34%), Gaps = 21/127 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                  N         I   +  D + +   Q   + LR AG+   +   + + FG ++
Sbjct: 464 DEKGIIWNETLSPFKFEIIISNLKDEEGVKFAQGLYEDLREAGVSVLLDDRNER-FGVKM 522

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              +    P A+I G G  + G +++                       + + T+  SE+
Sbjct: 523 SEFELMGFPYAVIVGKG-LAEGTVEL------------------VTRGGLVKETVKASEI 563

Query: 482 VSTVKKI 488
           ++ +K +
Sbjct: 564 LARLKSL 570


>gi|218288750|ref|ZP_03493013.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241108|gb|EED08284.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 483

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/137 (11%), Positives = 44/137 (32%), Gaps = 21/137 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD---SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                          V++  +         ++K +   + LR A IR  +      + G 
Sbjct: 280 DDRGLVLPPKLAPTQVVVVPIGPAKAREAVVAKARDLAEALRRADIRVHLDDRDDVSPGW 339

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +    + R  P+ +  G  +       +     G+++                  T+P+ 
Sbjct: 340 KFNEYELRGVPIRLELGPRDLEASQAVLARRDTGEKI------------------TVPLD 381

Query: 480 ELVSTVKKILQENKEEI 496
            ++  V+ +L + + ++
Sbjct: 382 GVIERVQALLSDIQRDM 398


>gi|199599516|ref|ZP_03212905.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258508749|ref|YP_003171500.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199589585|gb|EDY97702.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257148676|emb|CAR87649.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259650055|dbj|BAI42217.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 657

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G++ + TP+L   D   K     D   + +F  
Sbjct: 260 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLY-KTSGHWDHYREDMFPP 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 319 MDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 378

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +    ++  ++ D  E   I    + +   + K  +   +   + 
Sbjct: 379 MTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMW 438

Query: 186 GDDKLN 191
              +  
Sbjct: 439 TRSQSM 444



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 74/232 (31%), Gaps = 7/232 (3%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D   + +      +     EK F++  + +          + + +    
Sbjct: 399 KILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLHLDYYE 458

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GF 351
             G   + G   +      + N++    +        R++       G+         G 
Sbjct: 459 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGI 518

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R I  L  +              +    ++   L       + ++ AG+R ++  
Sbjct: 519 VGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKRQMQAAGLRVKVD- 577

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             ++  G +++ A  +  P  ++ G  E +   + ++    G E + E   N
Sbjct: 578 DRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVR--RYGDEHTEEEAGN 627


>gi|254517451|ref|ZP_05129507.1| prolyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911200|gb|EEH96401.1| prolyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 570

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     +++   + + +R    N G        ++ ++ L +     D  
Sbjct: 31  MIRKMASGIYNYMPLGLKVLKNVENIVREEMNNAGAQEFLASAVQPAE-LWQESGRWDVY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L+D + +   L  
Sbjct: 90  GAELIRLKDRNNREFCLGP 108



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 21/126 (16%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              ++      +I     D + +       + L++ G+ A +   + +  G + K +D  
Sbjct: 462 WPLSVAPYHVNIIPVNIKDEEQMKIANEIYEDLKSIGVDAILDDRNERA-GVKFKDSDLM 520

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P+ I  G      G ++ K L           + E+          I I E V  V++
Sbjct: 521 GIPMRITVGKK-IVDGEVEFK-LRT--------SDMEN----------IKIEEAVDRVRE 560

Query: 488 ILQENK 493
             ++NK
Sbjct: 561 EFKKNK 566


>gi|107021665|ref|YP_619992.1| prolyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|123072438|sp|Q1BZD6|SYP_BURCA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|105891854|gb|ABF75019.1| prolyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
          Length = 578

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138


>gi|156120539|ref|NP_001095415.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus]
 gi|152941102|gb|ABS44988.1| threonyl-tRNA synthetase-like 1 [Bos taurus]
          Length = 718

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/444 (11%), Positives = 111/444 (25%), Gaps = 81/444 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  I+  Y   GF  ++TP L +S  L +     +   +         
Sbjct: 324 FLPRGTRVYNALVAFIKAEYTRRGFSEVKTPTL-FSAKLWELSGHWEHYRE--------- 373

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               +L+                            P                  D   + 
Sbjct: 374 -DMFALQP---------------------------PGLDRPSSSQSDHSASPHTDTLALK 405

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 406 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGSLGGLTRLRCF 454

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +  G  D           +          LS      + E   
Sbjct: 455 QQDDAHIFCAPDQLEAEIR-GCLDFLHSVYTILGFSFHMA------LSTRPSGFLGEPCL 507

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     ++             + +   + R  +  T    ++  L F
Sbjct: 508 WDQAEQVLQQALEEFGAPWDISPGDGAFYGPKIDVHVRDALGRPHQCGTIQLDFQLPLRF 567

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +  K +                        +           L V  +S         
Sbjct: 568 D-LQYKGQLGALER---------------PVLIHRAVLGSVERMLGVLAESCGGKWPLWL 611

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V++  +  + +     +   Q LR AG+  ++   S      +++ A   +     
Sbjct: 612 SPFQVVVIPVGTEQE--EYAREAQQSLRAAGLVGDLDADSGLTLSRRIRRAQLAHYNFQF 669

Query: 434 IQGTGERSRGMLQIK---DLAKGK 454
           + G  E+S+  + I+   +   G+
Sbjct: 670 VVGQREQSKRTVNIRTRDNRRLGE 693


>gi|296489553|gb|DAA31666.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus]
          Length = 718

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/444 (11%), Positives = 111/444 (25%), Gaps = 81/444 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  I+  Y   GF  ++TP L +S  L +     +   +         
Sbjct: 324 FLPRGTRVYNALVAFIKAEYTRRGFSEVKTPTL-FSAKLWELSGHWEHYRE--------- 373

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               +L+                            P                  D   + 
Sbjct: 374 -DMFALQP---------------------------PGLDRPSSSQSDHSASPHTDTLALK 405

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 406 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGSLGGLTRLRCF 454

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +  G  D           +          LS      + E   
Sbjct: 455 QQDDAHIFCAPDQLEAEIR-GCLDFLHSVYTILGFSFHMA------LSTRPSGFLGEPCL 507

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     ++             + +   + R  +  T    ++  L F
Sbjct: 508 WDQAEQVLQQALEEFGAPWDISPGDGAFYGPKIDVHVRDALGRPHQCGTIQLDFQLPLRF 567

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +  K +                        +           L V  +S         
Sbjct: 568 D-LQYKGQLGALER---------------PVLIHRAVLGSVERMLGVLAESCGGKWPLWL 611

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V++  +  + +     +   Q LR AG+  ++   S      +++ A   +     
Sbjct: 612 SPFQVVVIPVGTEQE--EYAREAQQSLRAAGLVGDLDADSGLTLSRRIRRAQLAHYNFQF 669

Query: 434 IQGTGERSRGMLQIK---DLAKGK 454
           + G  E+S+  + I+   +   G+
Sbjct: 670 VVGQREQSKRTVNIRTRDNRRLGE 693


>gi|15837338|ref|NP_298026.1| threonyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|22654146|sp|Q9PFE2|SYT_XYLFA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9105624|gb|AAF83546.1|AE003915_11 threonyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 635

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   I + IR +Y N G+  +  P +       K     D   + +F  
Sbjct: 263 GLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQILDVSLWQKS-GHWDNYKENMF-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D + +  +++        +   +   +       Y         + 
Sbjct: 321 TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 367



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 38/118 (32%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+     +        + R I  L    +       + PV +   +      
Sbjct: 495 GAEYVDERSQRCHPVMLHRAIVGSMERFIGILIEHYAGIWP-TWLAPVQVVVANITDAQY 553

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +   + L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++
Sbjct: 554 EYAERVHKALLNQGFRVNTDL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGTVAVR 610


>gi|71898248|ref|ZP_00680422.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
 gi|71731987|gb|EAO34044.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1]
          Length = 635

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   I + IR +Y N G+  +  P +       K     D   + +F  
Sbjct: 263 GLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQILDVSLWQKS-GHWDNYKENMF-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D + +  +++        +   +   +       Y         + 
Sbjct: 321 TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 367



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ +   +        + R I  L    +       + PV +   +      
Sbjct: 495 GAEYVDERSQRRHPVMLHRAIVGSMERFIGILIEHYAGIWP-TWLAPVQVVIANITDAQY 553

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +   + L   G R  + L  ++  G +++    +  P  ++ G  E+  G + ++
Sbjct: 554 EYAEQVHKALLNQGFRVNIDL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGTVAVR 610


>gi|260220337|emb|CBA27773.1| Prolyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 580

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 41/109 (37%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++   +R      G   +  P+++ ++ L +     D+ 
Sbjct: 31  MIKKLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVELTMPVIQPAE-LWQETGRFDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   +   ++    ++   +AR   +++  +       +  
Sbjct: 90  GPELLRIKDRHERDYVVQPTSEEVVTDIARQEIKSYKQLPKNLYQIQTK 138


>gi|114152274|sp|Q3SH24|SYP_THIDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 576

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 38/115 (33%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++  L  G        +R+  R+   +R      G   +  P ++ ++ L +  
Sbjct: 26  MLRAGLIK-RLGSGLYTWMPLGLRVLRRVEAVVREEMNRAGAIELLMPAVQPAE-LWQET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
               +    +  ++D   +         ++   LAR   +++  +       +  
Sbjct: 84  GRWAQFGPQMLKIKDRHEREFCFGPTHEEVITDLARREIKSYRQLPLNFYQIQTK 138


>gi|74318130|ref|YP_315870.1| prolyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|74057625|gb|AAZ98065.1| prolyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
          Length = 579

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 38/115 (33%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++  L  G        +R+  R+   +R      G   +  P ++ ++ L +  
Sbjct: 29  MLRAGLIK-RLGSGLYTWMPLGLRVLRRVEAVVREEMNRAGAIELLMPAVQPAE-LWQET 86

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
               +    +  ++D   +         ++   LAR   +++  +       +  
Sbjct: 87  GRWAQFGPQMLKIKDRHEREFCFGPTHEEVITDLARREIKSYRQLPLNFYQIQTK 141


>gi|151941725|gb|EDN60086.1| mitochondrial aminoacyl-tRNA synthetase, threonine [Saccharomyces
           cerevisiae YJM789]
 gi|190409649|gb|EDV12914.1| threonyl-tRNA synthetase, mitochondrial precursor [Saccharomyces
           cerevisiae RM11-1a]
 gi|323304221|gb|EGA57996.1| Mst1p [Saccharomyces cerevisiae FostersB]
 gi|323308307|gb|EGA61553.1| Mst1p [Saccharomyces cerevisiae FostersO]
 gi|323332690|gb|EGA74095.1| Mst1p [Saccharomyces cerevisiae AWRI796]
 gi|323354220|gb|EGA86064.1| Mst1p [Saccharomyces cerevisiae VL3]
          Length = 462

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/446 (11%), Positives = 132/446 (29%), Gaps = 67/446 (15%)

Query: 14  GFADCPTKEIRIRNRILD--SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G         +I N++++   ++  ++ +GF+ + TPL+ Y  +L +     +     +F
Sbjct: 57  GSMFFLPNGAKIFNKLIEFMKLQQKFK-FGFNEVVTPLI-YKKTLWEKSGHWENYADDMF 114

Query: 72  SLQ--DDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  D++ +   L+            +   +    P R     P+ RNE  G       
Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTR 174

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           ++                   + ++   ++ +    Y+      K   G      ++   
Sbjct: 175 LRK----FHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFST 230

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           + +  +  L+             + +L E   ++   +       +     +   ++  L
Sbjct: 231 RPDHFIGDLKV--------WNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVTDHL 282

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            K+       +               + E       + +       ++    + +   + 
Sbjct: 283 RKTHQVATIQLD------------FQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFM 330

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A+L                    GR+   ++ ++   +P    ++    +  AL+    +
Sbjct: 331 ALL---------------IDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRN 375

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                +M PV                     L       ++ + +    G ++K A  +N
Sbjct: 376 EREADDMEPVP--------------------LNDWHFNVDLDIRNEP-VGYRIKSAILKN 414

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGK 454
               II G  E       I++    K
Sbjct: 415 YSYLIIVGDEEVQLQKYNIRERDNRK 440


>gi|28199783|ref|NP_780097.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182682533|ref|YP_001830693.1| threonyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130161|sp|Q87AB2|SYT_XYLFT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238691115|sp|B2I9P8|SYT_XYLF2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28057904|gb|AAO29746.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632643|gb|ACB93419.1| threonyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578811|gb|ADN62780.1| threonyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 635

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   I + IR +Y N G+  +  P +       K     D   + +F  
Sbjct: 263 GLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQILDVSLWQKS-GHWDNYKENMF-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D + +  +++        +   +   +       Y         + 
Sbjct: 321 TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 367



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ +   +        + R I  L    +       + PV +   +      
Sbjct: 495 GAEYVDERSQRRHPVMLHRAIVGSMERFIGILIEHYAGIWP-TWLAPVQVVIANITDAQY 553

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +   + L   G R  + L  ++  G +++    +  P  ++ G  E+  G + ++
Sbjct: 554 EYAEQVHKALLNQGFRVNIDL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGTVAVR 610


>gi|325279815|ref|YP_004252357.1| Prolyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324311624|gb|ADY32177.1| Prolyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 491

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 75/264 (28%), Gaps = 33/264 (12%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E ++      + + +                 +   S   R    
Sbjct: 167 EFLWQEGHTAHATKEEALEEANKMVRVYADFAQ------NWMAVPVIMGSKSESERFAGA 220

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G            +                +RL+ A
Sbjct: 221 LETFTIEALMQDGKALQAGTSHFLGQNFAKAFDVQFTNAEGKLEYVWATSWGVSTRLMGA 280

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +   ++ L K     Q   + LR  GI  +    
Sbjct: 281 LIMAHSDDNGLVLPPKLAPLQVVIVPIYKGAEGLKKISDKVQGLIEKLRAKGISVKYDDR 340

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            ++  G +    + +  P+ +  G  +   G +++                   R   + 
Sbjct: 341 DTQKPGWKFADYELKGVPVRLAMGERDLENGTIEV------------------ARRDTLT 382

Query: 473 QITIPISELVSTVKKILQENKEEI 496
           + T+P+  +V  ++K+L++ +E I
Sbjct: 383 KETLPLEGIVGHIEKLLEDIQENI 406


>gi|294677986|ref|YP_003578601.1| prolyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476806|gb|ADE86194.1| prolyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 446

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 34/109 (31%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  RI   +       G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQQAAGIYSWLPLGFKVLKRIEQIVHEEQIRAGHIPLLMPTLQPAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            + +  ++D   + +       ++   + R    ++  +       +  
Sbjct: 90  GQEMLRIKDRHEREMLYGPTNEEMITDIFRAHVSSYKDLPLTLYHIQWK 138


>gi|295839903|ref|ZP_06826836.1| threonine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197696732|gb|EDY43665.1| threonine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 658

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 41/122 (33%), Gaps = 3/122 (2%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R    L    +       + PV    +      +   + +    R  G+R ++   S 
Sbjct: 538 IERFFAVLLEHYAGAMP-PWLAPVQAVGIPVGDAHVPYLKEFAAEARKQGLRVDVDASSD 596

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +    +++   ++  P  II G  + + G +  +    G + +   K     +   V + 
Sbjct: 597 R-MQKKIRNHQKQKTPFMIIVGDDDMNAGTVSFRH-RDGSQENGIPKGEALAKLRDVVER 654

Query: 475 TI 476
            +
Sbjct: 655 RV 656


>gi|254413846|ref|ZP_05027615.1| prolyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196179443|gb|EDX74438.1| prolyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 596

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ SD L +     D   K    
Sbjct: 32  SGIYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQLQPSD-LWRESGRWDTYTKAEGI 90

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +F+L D   + + L     ++   +AR +  ++  +       +  
Sbjct: 91  MFALSDRQNRELGLGPTHEEVITTIAREMIRSYRQLPLHLYQIQTK 136



 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 49/169 (28%), Gaps = 24/169 (14%)

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD-- 384
           S   G  Y           +   G  +         +S +                +   
Sbjct: 445 SKAMGATYTNEAGEENPLYMGCYGVGVSRLAQAAVEQSYDKDGIIWAPAIAPYHAIITVP 504

Query: 385 --HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
              D+  +   +   Q L  AG+   +   + +  G + K AD    P  I+ G     +
Sbjct: 505 NISDTKQMEAAETLYQQLWQAGVETLLDDRNERA-GVKFKDADLIGIPYRIVTGRS-LKQ 562

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           G +++                     A      +P+ ++VST+K+ L  
Sbjct: 563 GKVEV------------------AVRATHQSQELPLDQVVSTLKQWLDA 593


>gi|114559283|ref|XP_001168777.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 3 [Pan
           troglodytes]
          Length = 666

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 58/463 (12%), Positives = 117/463 (25%), Gaps = 86/463 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y + GF  ++TP L         L +               
Sbjct: 272 FLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTL-----FSTKLWE-------------QS 313

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G W                E++             P                  D   + 
Sbjct: 314 GHW----------------EHYQED----MFAVQPPGSDRPPSSQSDDSTRHITDTLALK 353

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 354 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGGLGGLTRLRCF 402

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + +   
Sbjct: 403 QQDDAHIFCTTDQLEAEIQ-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGDPCL 455

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 456 WDQAEQVLKQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 515

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  + Q   +   V       G V R  G    + G                     + 
Sbjct: 516 DLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCG---------------GKWPLWLS 560

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I       +   + Q   Q LR AG+ +++   S      +++ A   +     
Sbjct: 561 PFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQF 617

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 618 VVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 652


>gi|114559277|ref|XP_001168750.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 2 [Pan
           troglodytes]
          Length = 635

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 58/463 (12%), Positives = 117/463 (25%), Gaps = 86/463 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y + GF  ++TP L         L +               
Sbjct: 241 FLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTL-----FSTKLWE-------------QS 282

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G W                E++             P                  D   + 
Sbjct: 283 GHW----------------EHYQED----MFAVQPPGSDRPPSSQSDDSTRHITDTLALK 322

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 323 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGGLGGLTRLRCF 371

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + +   
Sbjct: 372 QQDDAHIFCTTDQLEAEIQ-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGDPCL 424

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 425 WDQAEQVLKQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 484

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  + Q   +   V       G V R  G    + G                     + 
Sbjct: 485 DLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCG---------------GKWPLWLS 529

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I       +   + Q   Q LR AG+ +++   S      +++ A   +     
Sbjct: 530 PFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQF 586

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 587 VVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 621


>gi|114559279|ref|XP_001168807.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 4 [Pan
           troglodytes]
          Length = 657

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 58/463 (12%), Positives = 117/463 (25%), Gaps = 86/463 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y + GF  ++TP L         L +               
Sbjct: 263 FLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTL-----FSTKLWE-------------QS 304

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G W                E++             P                  D   + 
Sbjct: 305 GHW----------------EHYQED----MFAVQPPGSDRPPSSQSDDSTRHITDTLALK 344

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 345 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGGLGGLTRLRCF 393

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + +   
Sbjct: 394 QQDDAHIFCTTDQLEAEIQ-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGDPCL 446

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 447 WDQAEQVLKQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 506

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  + Q   +   V       G V R  G    + G                     + 
Sbjct: 507 DLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCG---------------GKWPLWLS 551

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I       +   + Q   Q LR AG+ +++   S      +++ A   +     
Sbjct: 552 PFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQF 608

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 609 VVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 643


>gi|114559269|ref|XP_001168944.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 9 [Pan
           troglodytes]
          Length = 718

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 58/463 (12%), Positives = 117/463 (25%), Gaps = 86/463 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y + GF  ++TP L         L +               
Sbjct: 324 FLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTL-----FSTKLWE-------------QS 365

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G W                E++             P                  D   + 
Sbjct: 366 GHW----------------EHYQED----MFAVQPPGSDRPPSSQSDDSTRHITDTLALK 405

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 406 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGGLGGLTRLRCF 454

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + +   
Sbjct: 455 QQDDAHIFCTTDQLEAEIQ-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGDPCL 507

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 508 WDQAEQVLKQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 567

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  + Q   +   V       G V R  G    + G                     + 
Sbjct: 568 DLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCG---------------GKWPLWLS 612

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I       +   + Q   Q LR AG+ +++   S      +++ A   +     
Sbjct: 613 PFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQF 669

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 670 VVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 704


>gi|39644807|gb|AAH07824.2| TARS2 protein [Homo sapiens]
          Length = 709

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 58/463 (12%), Positives = 117/463 (25%), Gaps = 86/463 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y + GF  ++TP L         L +               
Sbjct: 315 FLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTL-----FSTKLWE-------------QS 356

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G W                E++             P                  D   + 
Sbjct: 357 GHW----------------EHYQED----MFAVQPPGSDRPPSSQSDDSTRHITDTLALK 396

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 397 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGGLGGLTRLRCF 445

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + +   
Sbjct: 446 QQDDAHIFCTTDQLEAEIQ-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGDPCL 498

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 499 WDQAEQVLKQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 558

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  + Q   +   V       G V R  G    + G                     + 
Sbjct: 559 DLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCG---------------GKWPLWLS 603

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I       +   + Q   Q LR AG+ +++   S      +++ A   +     
Sbjct: 604 PFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQF 660

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 661 VVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 695


>gi|20070344|ref|NP_079426.2| threonyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|74752395|sp|Q9BW92|SYTM_HUMAN RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; AltName:
           Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor
 gi|12802990|gb|AAH00541.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|14603040|gb|AAH09997.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|55958996|emb|CAI15488.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|119573933|gb|EAW53548.1| threonyl-tRNA synthetase-like 1, isoform CRA_a [Homo sapiens]
 gi|168275836|dbj|BAG10638.1| threonyl-tRNA synthetase [synthetic construct]
          Length = 718

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 58/463 (12%), Positives = 117/463 (25%), Gaps = 86/463 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y + GF  ++TP L         L +               
Sbjct: 324 FLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTL-----FSTKLWE-------------QS 365

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G W                E++             P                  D   + 
Sbjct: 366 GHW----------------EHYQED----MFAVQPPGSDRPPSSQSDDSTRHITDTLALK 405

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 406 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGGLGGLTRLRCF 454

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + +   
Sbjct: 455 QQDDAHIFCTTDQLEAEIQ-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGDPCL 507

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 508 WDQAEQVLKQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 567

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  + Q   +   V       G V R  G    + G                     + 
Sbjct: 568 DLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCG---------------GKWPLWLS 612

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I       +   + Q   Q LR AG+ +++   S      +++ A   +     
Sbjct: 613 PFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQF 669

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 670 VVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 704


>gi|329733112|gb|EGG69449.1| threonine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 644

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 42/124 (33%), Gaps = 16/124 (12%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R  +    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVQIIPVNVD-LHYDYARQLQDELKSQGVRVSID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVE-KDEFIW-------------NLV 636

Query: 483 STVK 486
             ++
Sbjct: 637 DEIR 640



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     D   + +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDHYQEDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
              D  + + LR           A    +    P R   +G + R E           R 
Sbjct: 321 MQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRG 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +     +  M+ D  +  G +   + +   + +  +   +   + 
Sbjct: 381 MTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 NKAENM 446


>gi|325528042|gb|EGD05262.1| prolyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 578

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGALELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138



 Score = 40.2 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 21/86 (24%), Gaps = 3/86 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M +D               L  AGI   +     +  G  
Sbjct: 463 DDKGIIWPESIAPFEVVLCPMGYDRSDAVREAADKLYAELSAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQ 446
               +    P  ++ G      G ++
Sbjct: 522 FADWELIGVPHRVVIGERGLKEGKIE 547


>gi|325283002|ref|YP_004255543.1| threonyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314811|gb|ADY25926.1| threonyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 650

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 57/174 (32%), Gaps = 8/174 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I ++    G+  + +P L  S+   K     D   + +F +
Sbjct: 268 GLPIWLPSGATIRRELERFIVDVELKNGYQHVYSPALAKSELY-KISGHWDHYQEDMFPI 326

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG------PGRFR 126
              D + + LR        +  A    +    P +   +G ++R E+ G        R  
Sbjct: 327 MHLDQEELVLRPMNCPHHIQIYAHKPHSYRELPLKIAELGTMYRYEQSGQLTGLSRVRSM 386

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                 +       +     +  M+ +  E +G K   Y + + + +  +   +
Sbjct: 387 TLNDAHIFCRPDQIQEEFKAVVRMIQEVYEVLGFKDYSYRLSLRDPQDTEKYYQ 440



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +       +  +     L  AG+RAE+   S +    +++ A+ +  P+ +I G  
Sbjct: 552 QVMIIPIADRHNAYAEELRAELVAAGLRAEVDTSSDR-MNAKVRDAELKKIPVMLIVGDK 610

Query: 439 ERSRGMLQIK 448
           E+    + ++
Sbjct: 611 EQEARAVSVR 620


>gi|295397484|ref|ZP_06807567.1| threonine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974284|gb|EFG50028.1| threonine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 656

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/463 (10%), Positives = 115/463 (24%), Gaps = 81/463 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G++ + TP++   +   K     D  ++ +F 
Sbjct: 273 SGLPFWLPKGATIRRIIERYIIDKEVSLGYEHVYTPIMADVELY-KTSGHWDHYHEDMFP 331

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
             D   G+ + LR                        Y+       E          +  
Sbjct: 332 PMDMGDGEQLVLRP--------------MNCPHHMMVYKNDIHSYREFPVRIAELGMMHR 377

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +   S      EM +  A         + ++   I   K +    +        +L+
Sbjct: 378 YEKSGALSGLQRVREMTLNDAHIFVRPDQIKEEFTRVIELIKQV--YDDFNITDYRFRLS 435

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
            R          D    +  + +L E   D   ++ +     +     +           
Sbjct: 436 YRDPNNTDKYFDDDEMWEKAQAMLKEAMDDLGLEYFEAIGEAAFYGPKLD---------- 485

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             ++   +           + ++             +      ++      T   + A L
Sbjct: 486 -VQMKTALGNEETMSTVQLDFLLPERFDLTYVGQDGQDTHRPVVIHRGVVSTMERFVAYL 544

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                                 Y G    +                  +A    +    N
Sbjct: 545 I-------------------EEYKGAFPTW------------------LAPVQAKLIPVN 567

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
            +              + + +           G+R E+    ++  G +++ A  +  P 
Sbjct: 568 DEAH--------GEHVEEIRRRMKAA------GMRVEVD-NRNEKMGYKIREAQTQKIPY 612

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  E +   + ++     + LS       +  E  + + 
Sbjct: 613 QLVFGDNEIAENTVTVRRYGSKETLSMPFDEFLAQLEQDIKEY 655


>gi|167564170|ref|ZP_02357086.1| prolyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167571291|ref|ZP_02364165.1| prolyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 578

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQNDFVIGPTHEEVITDIARNQIKSYRQMPVNFYQIQTK 138


>gi|71275167|ref|ZP_00651454.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon]
 gi|170731158|ref|YP_001776591.1| threonyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687955|sp|B0U5E3|SYT_XYLFM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71163976|gb|EAO13691.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon]
 gi|167965951|gb|ACA12961.1| threonyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 635

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   I + IR +Y N G+  +  P +       K     D   + +F  
Sbjct: 263 GLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQILDVSLWQKS-GHWDNYKENMF-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D + +  +++        +   +   +       Y         + 
Sbjct: 321 TDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 367



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ +   +        + R I  L    +       + PV +   +      
Sbjct: 495 GAEYVDERSQRRHPVMLHRAIVGSMERFIGILIEHYAGIWP-TWLAPVQVVIANITDAQY 553

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +   + L   G R  + L  ++  G +++    +  P  ++ G  E+  G + ++
Sbjct: 554 EYAEQVHKALLNQGFRVNIDL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGTVAVR 610


>gi|323466103|gb|ADX69790.1| Threonyl-tRNA synthetase 1 [Lactobacillus helveticus H10]
          Length = 661

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 517 TYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNNEAHGEY 576

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L   G R E+    ++  G +++ +  +  P  ++ G  E   G + ++    
Sbjct: 577 AEKVRAELAKRGFRVEVD-DRNEKMGYKIRESQTQKVPYTLVLGDEEMKSGKVNVRCYGT 635

Query: 453 GKELSREIKNNESWREA 469
            +E+S+ + +  +  +A
Sbjct: 636 DEEISKSLDDFINEIDA 652



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 277 GLPYWMPKGATIRRVVERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYRDDMF 333

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 334 PPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 393

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                +T  A++  ++ D  +   I    + +   + K  D       
Sbjct: 394 REMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDE 453

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 454 MWEKSQKM 461


>gi|316933337|ref|YP_004108319.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601051|gb|ADU43586.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 693

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 96/356 (26%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
              S       E         E    KR      +N    +      +  + D  L    
Sbjct: 334 WETSGHWEWYRENMFAAQSAGEDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAE 393

Query: 195 I--VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V R        GL  V+        D++  F   A L  E I I    LS   +   
Sbjct: 394 FGVVHRYEPSGAMHGLMRVRG----FTQDDAHVFCTEAQLAEECIKINDLILSTYSDFGF 449

Query: 253 HELYE-LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE----YYTGCVY 307
                  +        G +E+   +E V  +  +  + K  + I   +      + G  +
Sbjct: 450 EGELTVKLSTRPDKRVGTDEMWDHAERVMATVLSEIKAKGGNRIKTEINPGEGAFYGPKF 509

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALK 363
           E +L   +  + Q            R+        G               + R    L 
Sbjct: 510 EYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFTGILI 569

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLK 422
              +    +  + PV +      S+     +     LR AG+RA++ L + K NF    +
Sbjct: 570 EHYAGNFPLW-LAPVQVVVTTITSEGDEYAKKVLAALRKAGLRADIDLRNEKINFKV--R 626

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
                  P  ++ G  E     + ++ L    +         +          +  
Sbjct: 627 EHSLAKVPALLVVGKKEAETHSVSVRRLGSDGQKVMPTDEAIAALVDEATPPDVRR 682


>gi|285019440|ref|YP_003377151.1| prolyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474658|emb|CBA17157.1| probable prolyl-trna synthetase protein [Xanthomonas albilineans]
          Length = 564

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 40/160 (25%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L        + 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVETVVREEMNRAGALEVVFPTIQPRE-LWDATGRWKKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +  ++D   Q         +  A  AR+   ++  +          +R     R   
Sbjct: 90  GDLMLRIRDRKEQDYCYSPTAEEAAADFARHELNSYKQLPVNFYQIQSKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F            +        M          +G
Sbjct: 150 MRAREFLMKDAYSFHLSDTDLAREYENMKAAYHRIFTRLG 189


>gi|290961808|ref|YP_003492990.1| threonine-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260651334|emb|CBG74456.1| threonine-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 658

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/432 (11%), Positives = 116/432 (26%), Gaps = 54/432 (12%)

Query: 69  GVFSLQDDDGQWISL-RYDLTAPLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            +FS+ D  G  +++        + R V E                     + +      
Sbjct: 268 DLFSIPDQIGSGLAVFHPKG--GIIRRVMEDYSRRRHEEEGYEFVYTPHATKGKLFETSG 325

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
              +    +       E  D  +  M       +   R   +  +  R    G + +   
Sbjct: 326 HLDWYADGMYPPMQLDEGVDYYLKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEK 385

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
            G      R       D       + +   L +  T    +  +   LT   ++     L
Sbjct: 386 SGVVHGLTRARGFTQDDAHIYCTKEQMAEELDKTLTFVL-NLLRDYGLTDFYLE-----L 439

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLE 300
           S    +      E+ + +    +   E    L+V              +++   I R  +
Sbjct: 440 STKDPEKFVGSDEIWEESTETLRQVAEKQGLLLVPDPGGAAFYGPKISVQVKDAIGRTWQ 499

Query: 301 YYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
             T    +     F +            V                 +    F        
Sbjct: 500 MSTVQLDFNLPERFDLEYTGPDGSKQRPVM----------------IHRALFGSIERFFA 543

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           V L+    +      + PV    +      +   Q +    +  G+R ++   S +    
Sbjct: 544 VLLEHYAGAFPAW--LAPVQAVGIPIGDAHVEYLQKFAAEAKRKGLRVDVDASSDR-MQK 600

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +++ A +   P  +I G  + + G +  +    G + +                  IP+ 
Sbjct: 601 KIRNAQKAKVPFMVIAGDEDMAAGAVSFRY-RDGSQENG-----------------IPVE 642

Query: 480 ELVSTVKKILQE 491
           E ++ + K++++
Sbjct: 643 EAIAKIAKVVED 654


>gi|327441016|dbj|BAK17381.1| prolyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 568

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 63/534 (11%), Positives = 130/534 (24%), Gaps = 78/534 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ ++I   IR   E      +  P L+ ++ L +     +     +  L
Sbjct: 38  GVYSYLPLARRVLSKIEQIIREEMEAINSIELLMPALQPAE-LWQESGRWEAYGPELMRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRFR 126
           +D   +  +L     ++   L R   +++  +          +R     R        F 
Sbjct: 97  KDRHDRDFALGATHEEVITTLVRDEIKSYKKLPLTLYQIQSKFRDEKRPRFGLLRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG--------INNRKILDGI 178
                   +   S +    +M    ++    +G+                 +   +L  I
Sbjct: 157 MKDAYSFHSSRESLDATYDDMYRAYSNIFTRLGLNFRAVIADAGTIGGKGTHEFMVLSEI 216

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            E    + D       I +  +          +K +      D        A L  E  +
Sbjct: 217 GEDTIAYSDTSDYAANIEMAEVVVEYTAPTTPMKDIEKIETPDQKTIEEVSAFLNVEPSN 276

Query: 239 IMVSFLSIDLEKSM------HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
           ++ S +     + +            +K   A      EL   + +    G     I   
Sbjct: 277 VIKSLVFDIDGELVVVLARGDHEINDIKLKNALGATSVELAEDAAIKELLGCTPGSIGPV 336

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKP---VVFGSVGGGGRYDGLVSRFKGQNVP-- 347
              V         +     G    NE       V          Y+ +    +G   P  
Sbjct: 337 KLPVNVKVIADNAIKSIRNGVAGANEDGFHLLNVNPERDFAISSYEDIRFIQQGDPSPDG 396

Query: 348 ----------------ATGFSIGISRLIVALKSLES------------------------ 367
                             G +         L                             
Sbjct: 397 QGIIKFAEGIEVGHIFKLGTTYSEKLNATFLDEQGKAKPYIMGCYGIGVSRILAAVAEHF 456

Query: 368 -------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS-SKNFGN 419
                      +      L+     D   +        +L++   R E+   + ++  G 
Sbjct: 457 QDENGFVWPAQLAPYDLQLVPVNAKDEAQVQLADELYGVLKS--YRYEVLYDNRAERAGV 514

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +   AD    P+ I  G    S G++++K  + G+      +           Q
Sbjct: 515 KFADADLIGLPVRITVGKK-ASEGLVEVKFRSTGESAEWAKEEVVDRLNEYFRQ 567


>gi|301768134|ref|XP_002919483.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 723

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 4/123 (3%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   Q    A    ++ L     
Sbjct: 598 ERMIAILTENFGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFTVDIDLDPGCT 657

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK---GKEL-SREIKNNESWREARVA 472
              +++ A        ++ G  E++ G + I+       G+   S  I+  +  +++R  
Sbjct: 658 LNKKIRNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTISETIERLQQLKQSRSK 717

Query: 473 QIT 475
           Q  
Sbjct: 718 QAE 720



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + +P + Y+  L          ++ +FS + + 
Sbjct: 345 FLPKGAYIYNTLIEFIRSEYRKRGFQEVVSPNI-YNSRLWMTSGHWQHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 404 -ELFALKPMNCPG 415


>gi|78222623|ref|YP_384370.1| threonyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78193878|gb|ABB31645.1| Ser-tRNA(Thr) hydrolase [Geobacter metallireducens GS-15]
          Length = 645

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M    +  S      + LR++GIR       ++  G +++ A  +  P  +
Sbjct: 545 WLSPVQAIVMTVTDNQQSYAAQVFEALRSSGIRVRKDF-RNEKLGFKIREAQLQKIPYML 603

Query: 434 IQGTGERSRGMLQ 446
           + G  E   G + 
Sbjct: 604 VIGDKEVESGTVT 616



 Score = 37.1 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 2/91 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF         +R  + D  R  +   G+D +  P +  +D   +     D   + ++  
Sbjct: 272 GFVIWHPNGAMLRTILEDFERKEHLKRGYDIVVGPQILKTDLWQRS-GHYDNYRENMY-F 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
            + + Q   ++             +  +   
Sbjct: 330 TEVEEQSFGIKPMNCLSHMMIYKSHLRSYRD 360


>gi|75908528|ref|YP_322824.1| prolyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|114152169|sp|Q3MAQ7|SYP_ANAVT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|75702253|gb|ABA21929.1| Prolyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 604

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ S+ L K     D   K    
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQLQPSE-LWKESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +FSL D   Q + L     ++   +AR +  ++  +       +  
Sbjct: 96  MFSLIDRREQQLGLGPTHEEVITAIARDMIRSYRQLPLHLYQLQTK 141



 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 20/129 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++     +D+  +   +     L  +G+   +   + +  G + K AD 
Sbjct: 494 IWPVAIAPYHAIVTIPNINDAQQVEIAERLYTELNQSGVETLLDDRNERA-GVKFKDADL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I+ G    + G ++I                     A      IPI E+++T++
Sbjct: 553 IGIPYRIVTG-RAITNGKVEI------------------VERATRQSQEIPIDEVITTLQ 593

Query: 487 KILQENKEE 495
           + ++   E+
Sbjct: 594 QWIKAAIEQ 602


>gi|322371434|ref|ZP_08045983.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320548966|gb|EFW90631.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 645

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 74/260 (28%), Gaps = 17/260 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK-GVFS 72
           G  +     + IR  + + +R      G++ ++TP L +++   K    +    +  +F+
Sbjct: 265 GCVNFHPNGMAIRRELEEYVREKNAELGYEEVKTPELNHTELWKKSGHYDHFKEEGEMFA 324

Query: 73  LQDDDGQWISLRYDLTAPLARYV-AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
            +  +G    L+    A  A     +       P R    G  +RNE+ G       +  
Sbjct: 325 WE-QNGHEYGLKPMNCANHAHIYDDQRRSYRDLPLRFSEFGMCYRNEQSGELSGMLRV-- 381

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                                  +   GI+            + +       L  + K +
Sbjct: 382 ------------RGFTQDDGHAFVRPEGIREEIARTLSVIDGMYEAFGLDAHLVLETKPD 429

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           + +      ++  +     ++    E           G  +     D +    +I   + 
Sbjct: 430 DAIGDDELWERAHEALRNALEDEGLEYDVAEGEGAFYGPKIAINVEDAIGREWTIGTVQL 489

Query: 252 MHELYELVKGTIAGEKGFNE 271
                E +  +  GE     
Sbjct: 490 DFVQPERLDISYVGEDNEEH 509



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/431 (11%), Positives = 102/431 (23%), Gaps = 23/431 (5%)

Query: 49  LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
             E    L  FL   +   K        +    S+  D +     +   N   I      
Sbjct: 225 AFERESELESFLERREEAAKRDHRKIGREMDLFSV-PDHSPGCVNFHP-NGMAIRRELEE 282

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           Y                           G      +              G+K  +    
Sbjct: 283 YVREKNAELGYEEVKTPELNHTELWKKSGHYDHFKEEGEMFAWEQNGHEYGLKPMNCANH 342

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
            +           + L    + +E  +  R     +  G+  V+        D+   F +
Sbjct: 343 AHIYDDQRRSYRDLPL----RFSEFGMCYRNEQSGELSGMLRVRG----FTQDDGHAFVR 394

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
              +  E    +     +     +     +++       G +EL   +    ++      
Sbjct: 395 PEGIREEIARTLSVIDGMYEAFGLDAHL-VLETKPDDAIGDDELWERAHEALRNALEDEG 453

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-- 346
           ++       G  Y         +   +  E     V        R D        +    
Sbjct: 454 LEYDVAEGEGAFYG--PKIAINVEDAIGREWTIGTVQLDFVQPERLDISYVGEDNEEHRP 511

Query: 347 ---PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
                         + V ++ +            V I  +  D    ++       L   
Sbjct: 512 VMIHRALLGSMERFMGVFIEHVAGKFPFWLAPEQVRILPITDDESGYAE--EIADEL--G 567

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             R E+        G +++       P  II G+ E   G + ++D  + +E   E  + 
Sbjct: 568 SFRVEVD-DRDWTLGKKIRAGHDDRVPYMIIVGSDEAESGTISVRDREERQEGGVERDDF 626

Query: 464 ESWREARVAQI 474
               EA   + 
Sbjct: 627 RRHLEAEYGEK 637


>gi|229552552|ref|ZP_04441277.1| threonine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539925|ref|YP_003174424.1| threonyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314104|gb|EEN80077.1| threonine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151601|emb|CAR90573.1| Threonyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 657

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +     G++ + TP+L   D   K     D   + +F  
Sbjct: 260 GLPYWMPNGATIRRVIERYIIDKEIADGYEHVYTPVLANLDLY-KTSGHWDHYREDMFPP 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 319 MDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 378

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +    ++  ++ D  E   I    + +   + K  +   +   + 
Sbjct: 379 MTLNDGHTFVALDQVQEEFKKILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMW 438

Query: 186 GDDKLN 191
              +  
Sbjct: 439 TRSQSM 444



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 74/232 (31%), Gaps = 7/232 (3%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D   + +      +     EK F++  + +          + + +    
Sbjct: 399 KILRLIMDVYEDFNITDYSFRLSYRDPKNTEKYFDDDEMWTRSQSMLKGAMDDLHLDYYE 458

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GF 351
             G   + G   +      + N++    +        R++       G+         G 
Sbjct: 459 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFNLTYVGKDGEEHRPVMIHRGI 518

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R I  L  +              +    ++   L       + ++ AG+R ++  
Sbjct: 519 VGTMERFIAYLTEIYKGAFPTWLAPTQAVLIPVNNDLHLDYVNRIKRQMQAAGLRVKVD- 577

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             ++  G +++ A  +  P  ++ G  E +   + ++    G E + E   N
Sbjct: 578 DRNEKMGYKIREAQTKKIPYTVVVGDKELNDAAVSVR--RYGDEHTEEEAGN 627


>gi|82524022|emb|CAI78700.1| Threonyl-tRNA synthetase [uncultured Flavobacteriaceae bacterium]
          Length = 644

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 3/108 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + + L+    +          +I  +          +    +L
Sbjct: 510 HRPVMIHRAPFGSIERFIAILLEHTAGNFPLWLMPKQAIILCIS--EKYEKYAEKVLNLL 567

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               IRA +    ++  G +++ A+ +  P  II G  E S   + ++
Sbjct: 568 ENNEIRALVD-NRNETIGKKIREAEMQKYPYMIIIGENEESENKISVR 614



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 18/47 (38%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R R+ D ++   +  G++ + TP +   +      
Sbjct: 260 GLPLWLPKGAALRERLEDFLKKAQKKAGYEMVVTPHIGQKELYVTSG 306


>gi|190571398|ref|YP_001975756.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018797|ref|ZP_03334605.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238055114|sp|B3CMJ4|SYT_WOLPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190357670|emb|CAQ55114.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995748|gb|EEB56388.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 633

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 82/293 (27%), Gaps = 7/293 (2%)

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I         D                   L G+ + +     D++  F     + SE +
Sbjct: 338 IFNSHIRSYRDLPIRMAEFGTCHRNESSGSLHGL-MRVRGFTQDDAHIFCMEKQVNSETV 396

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
                   +  E   +E+            G +E+   +E           +        
Sbjct: 397 KFCDLLKEVYSELGFNEISVKFSDRPDTRSGNDEVWDRAERALLEAVKEAGLSYELNPGE 456

Query: 298 GLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           G  Y     +   +AI         Q   +     G         +     +        
Sbjct: 457 GAFYGPKLEFILKDAIGRNWQCGTLQVDFILPERLGAFYIGTDGHKHHPVMLHRAILGTF 516

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              + + +++             + I T+ ++SD        + +L+  G+R +  L + 
Sbjct: 517 ERFIGILIENYAGKFPVWLAPTQLAILTITNESD--GYATEISNVLKEQGVRIKTDLTNE 574

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           K    +++       P+  I G  E +   + +++L   K+ S  ++N     
Sbjct: 575 K-ISYKIRLHSSSKVPILWIIGKNEVTNKTVSVRNLGSEKQESFSLENATELL 626



 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 40/108 (37%), Gaps = 2/108 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N +   IR    N G+  ++TP+L   +   K     D+  + +F + + +
Sbjct: 263 WHEQGYTLYNVLESYIRKKLMNNGYFEVKTPILVSKELWEKS-GHWDKFRENMFIIDESE 321

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + ++++        +    +  +    P R    G   RNE  G   
Sbjct: 322 SKKLAIKPMNCPCHVQIFNSHIRSYRDLPIRMAEFGTCHRNESSGSLH 369


>gi|171057265|ref|YP_001789614.1| prolyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|226701306|sp|B1XYW5|SYP_LEPCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170774710|gb|ACB32849.1| prolyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 581

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 38/104 (36%), Gaps = 4/104 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G  +     +R+  ++   IR      G   +  P+++ ++ L +     D+ 
Sbjct: 31  MIKRLGAGIYNYMPMGLRVIRKVEAIIREEMNRAGAVELLMPVVQPAE-LWQETGRFDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
              +  ++D   +   ++    ++   +AR    ++  +     
Sbjct: 90  GPELLRVKDRHDRDFIIQPTSEEVVTDIARQELRSYKQLPKNFY 133



 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 44/165 (26%), Gaps = 24/165 (14%)

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVA---LKSLESSTNNIKEMGPVLITTMDHD-- 386
             Y     + +   +   G  +             +      +      V++  + +D  
Sbjct: 436 ATYLDENGKPQFMEMGCYGIGVTRILGAAIEQKHDARGILWPDAIAPFTVVVCPIGYDRS 495

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           ++  +        L+ AGI   +     +  G      +    P  ++        G + 
Sbjct: 496 AEVKAAADALHDELQAAGIDVMLD-DRGERPGAMFADWELIGVPHRVVISDRGLKAGQV- 553

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                            E       A  T+P +E+ + VK  L+ 
Sbjct: 554 -----------------EYQGRCDEAASTVPAAEVAAFVKGRLRS 581


>gi|114152276|sp|Q5E719|SYP_VIBF1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 571

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 48/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRRLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   + E      D +     K  D        
Sbjct: 146 RFGVMRAREFCMMDAYSFDINKEGLQKSYDAMHDAYCKAFDRMGLEYRP 194



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +     L   GI   +F    +  G  
Sbjct: 461 DEYGIVWPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELTAMGIEV-LFDDRKERPGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            K  +    P  I+ G      G  + K+     + + E+ N     +A+++
Sbjct: 520 FKDIELIGIPHTIVIGDRSMDEGHFEYKNRRANTKEAVEMANIVEHIKAQLS 571


>gi|40062714|gb|AAR37627.1| ATP phosphoribosyltransferase regulatory subunit, putative
           [uncultured marine bacterium 314]
          Length = 356

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 78/249 (31%), Gaps = 9/249 (3%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           + I ++++  GF   E  +L  S+ + +   +     K + + +DD G+ + LR DLT  
Sbjct: 8   EKILDVFKKKGFVFSEPDVLLDSNYIIQRSGE--NFKKLMLTFEDDTGKNMCLRPDLTVA 65

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
                 +                      +         Q  ++ +GS  + +D +  + 
Sbjct: 66  ---ACVKYLKENSRGASKIYYSGQAYRRSNNSKESIINDQVGLEIIGSKKKLSDDKEIIN 122

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR---AIDKLDKFG 207
                    IK  +  I I N  +   +++ + +    KL       R     D L++  
Sbjct: 123 TILKSID-KIKIKNVSINIGNVSLFRQLIDSLNMPERWKLRLIRHFWRPKYFEDLLNRLE 181

Query: 208 LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK 267
                  +            K  N   E     +S +    +K + +     +G    + 
Sbjct: 182 TNSDIDPITVDFDKKKFSEMKKLNQNQEIAGRKISEILSRFDKKIRDPRSFAEGKKTAKI 241

Query: 268 GFNELVVIS 276
               L +  
Sbjct: 242 IREFLKISC 250


>gi|86608604|ref|YP_477366.1| prolyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|114152268|sp|Q2JMD8|SYP_SYNJB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|86557146|gb|ABD02103.1| prolyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 609

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 20/125 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++     D + +S  +   Q L TAGI         +  G + K AD 
Sbjct: 499 IWPVAIAPYHVVVVVPNISDPEQMSVAEKLVQDLATAGIETLWDDRDERA-GVKFKDADL 557

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I  G     +G +++ + A G                      IPI E+V+T+K
Sbjct: 558 IGIPYRITTGRS-LKQGKVELTERASG------------------QATEIPIEEVVTTLK 598

Query: 487 KILQE 491
           + ++ 
Sbjct: 599 ERIEA 603



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 11/156 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG---V 70
           G         R+  +I + +R      G      P L+ ++   +     D   +    +
Sbjct: 42  GIYTYLPLLWRVLQKISEIVRQEMNAIGGQECLLPQLQPAEI-WRESGRWDVYTQAEGIM 100

Query: 71  FSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPG 123
           F+L+D  G+  SL     ++   LAR +  ++  +       +                 
Sbjct: 101 FALKDRQGREQSLGPTHEEVITLLARDLIRSYRQLPQTLYQIQTKFRDEIRPRFGLMRGR 160

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
            F             S      +M    +  L   G
Sbjct: 161 EFIMKDAYSFHANEESLRQTYQDMYRAYSRILRRCG 196


>gi|302669952|ref|YP_003829912.1| threonyl-tRNA synthetase ThrS [Butyrivibrio proteoclasticus B316]
 gi|302394425|gb|ADL33330.1| threonyl-tRNA synthetase ThrS [Butyrivibrio proteoclasticus B316]
          Length = 602

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L   +     L   GIRAE+     +  G +++ A  +  P  I
Sbjct: 503 WLSPVQVKVLPVSDKYLDYAKEIMAKLYEEGIRAELD-DRDEKLGFKIREARMQKVPYMI 561

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I G  E+   ++ ++     ++  +EI   +
Sbjct: 562 IVGEKEKDNRLVSVRQ-RDAEQDKQEIGEMD 591



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + ++N ++D  R I+   G+  I TP++  + +L +     D     ++ +
Sbjct: 230 GLPFYFPKGLVLKNLLIDYWRKIHVREGYQEISTPIM-LTKALWEKSGHWDHYRDNMY-V 287

Query: 74  QDDDGQWISLRYDLTAP 90
              D    +++      
Sbjct: 288 TSVDDMDYAIKPMNCPG 304


>gi|294101704|ref|YP_003553562.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616684|gb|ADE56838.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 633

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D L   ++    L    IR E+     +  G +++ A  +  P   
Sbjct: 531 WLAPVQVRLLPISEDFLDYARLVQAKLVANNIRVEID-SRDEKLGKKIRDAQIQKIPYMA 589

Query: 434 IQGTGERSRGML 445
           + G  E +   +
Sbjct: 590 VIGEKEVASDQV 601



 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 3/84 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P GF     K + I N++ +  R ++E  G+  I TPL+       +     D  
Sbjct: 251 IQPEGP-GFPFFHPKGMAILNKLTEFWRQVHEKNGYCEIRTPLILDRSLWIRS-GHWDHY 308

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
              ++   + D    +++      
Sbjct: 309 RDNMY-FTEIDEMPFAIKPMNCPG 331


>gi|16800424|ref|NP_470692.1| prolyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81853975|sp|Q92C35|SYP_LISIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|16413829|emb|CAC96587.1| prolyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 568

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 73/253 (28%), Gaps = 12/253 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G             +I   +R   E  G   +  P L+ ++ L             
Sbjct: 34  QVASGIYSYLPLATLTLRKIEAIVREELEAIGAAEMLMPALQPAE-LWHESGRWADYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  L+D   +   L     +L   L R   +++  +          +R     R      
Sbjct: 93  LMRLKDRAARDFVLGPTHEELITSLLRDEIKSYKRLPITLYQIQTKFRDEKRPRFGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
             F             S +     M    ++     G++         +    +    K 
Sbjct: 153 REFIMKDAYSFHATSESLDETFELMHQAYSNIFSRCGLEFRSVIADSGSIGGNES---KE 209

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   D   + +    A D      +  V L + +   +   +  K A    + I  +V 
Sbjct: 210 FMALSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKELEKVATENQKTIADIVE 268

Query: 243 FLSIDLEKSMHEL 255
           FL + +EK+M  +
Sbjct: 269 FLEVPIEKTMKSM 281



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNMKSEEQVAFAESLYDSLQKAGFSVLIDDRTERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDEL 557


>gi|315659856|ref|ZP_07912715.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315495144|gb|EFU83480.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 638

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/358 (11%), Positives = 100/358 (27%), Gaps = 21/358 (5%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           +   N   +      +      +N+           Q   +  G      +      + +
Sbjct: 265 FYLSNGQFVRNQMENFLREIQLKNDYDEVRTPLMMNQKLWEESGHWDHYHENMYFTKVDE 324

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
              A+       H+          I +       D         +         L G+  
Sbjct: 325 NDYALKPMNCPGHML---------IFKNELRSYKDLPLRMAEFGQVHRHEFSGALNGLLR 375

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
           +      D++  F   + + SE  DI+     I          EL   +   E    EL 
Sbjct: 376 VRT-FCQDDAHIFIMKSQIKSEVEDILKLIDYIYSVFGFTYSIEL---STRPEDYLGELK 431

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
           + +E  +      + + +  TI  G   + G   +  +   +    Q   V        +
Sbjct: 432 LWNEAEQSLANVLDELGLKYTINEGDGAFYGPKIDVHIKDALNRSHQCATVQLDFQMPEK 491

Query: 334 YDGLVSRFKGQNV-----PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
           +D      + +           F        + ++  + +      M PV +  +    +
Sbjct: 492 FDLTYINEQNEKERPVVLHRAIFGSLDRFFGILIEHFKGAFPLW--MAPVQVNIIGVSDN 549

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           + +      + L+   IR  +     +  G +++ +  +  P  ++ G  E+   ++ 
Sbjct: 550 NTAYVNKVFEALQNNNIRVVID-DRDEKLGKKIRESQMKKIPYTLVLGDHEQENNVVS 606



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/395 (10%), Positives = 107/395 (27%), Gaps = 30/395 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G     +    +RN++ + +R I     +D + TPL+     L +     D  ++ ++  
Sbjct: 262 GMPFYLSNGQFVRNQMENFLREIQLKNDYDEVRTPLMMN-QKLWEESGHWDHYHENMY-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D    +L+             +        R+Y+  P+   E     R       + 
Sbjct: 320 TKVDENDYALKPMNCPG-------HMLIFKNELRSYKDLPLRMAEFGQVHRHEFSGALNG 372

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +M +     V           +             +    +  + 
Sbjct: 373 LLRVRTFCQDDAHIFIMKSQIKSEVEDILKLIDYIYSVFGF------TYSIELSTRPEDY 426

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  L+  ++ ++     +  L  +   +       G  +     D +         +   
Sbjct: 427 LGELKLWNEAEQSLANVLDELGLKYTINEGDGAFYGPKIDVHIKDALNRSHQCATVQLDF 486

Query: 254 ELYELVKGTIAGEKGFNE------------LVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           ++ E    T   E+   E            L     ++ +    +  + ++   V  +  
Sbjct: 487 QMPEKFDLTYINEQNEKERPVVLHRAIFGSLDRFFGILIEHFKGAFPLWMAPVQVNIIGV 546

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                      F  +      VV        +    +   + + +P T       +    
Sbjct: 547 SDNNTAYVNKVFEALQNNNIRVVIDD--RDEKLGKKIRESQMKKIPYTLVLGDHEQENNV 604

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
           + +    ++   E+  +         +  SK  + 
Sbjct: 605 VSAR-KYSHEDNEVMDIQNFIAQLQEEVESKALLV 638


>gi|297663737|ref|XP_002810324.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase,
           mitochondrial-like [Pongo abelii]
          Length = 719

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 60/463 (12%), Positives = 118/463 (25%), Gaps = 86/463 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L K                   
Sbjct: 325 FLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL-FSTKLWK-----------------QS 366

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G W                E++             P                  D   + 
Sbjct: 367 GHW----------------EHYQED----MFAVQPPGSDRPPSSQSDDSTRHITDTLALK 406

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 407 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGGLGGLTRLRCF 455

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + +   
Sbjct: 456 QQDDAHIFCTTDQLEAEIQ-SCLDFLRSVYAVLGFSFHLA------LSTRPSGFLGDPCL 508

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 509 WDQAEQVLKQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 568

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  + Q   +   V       G V R  G    + G                     + 
Sbjct: 569 DLQYKGQAGALERPVLIHRAVLGSVERLLGVLAESCG---------------GKWPLWLS 613

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V+I       +   + Q   Q LR AG+ +++   S      +++ A   +     
Sbjct: 614 PFQVVVIPVGTEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRVRRAQLAHYNFQF 670

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 671 VVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 705


>gi|259147648|emb|CAY80898.1| Mst1p [Saccharomyces cerevisiae EC1118]
          Length = 462

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/446 (11%), Positives = 132/446 (29%), Gaps = 67/446 (15%)

Query: 14  GFADCPTKEIRIRNRILD--SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G         +I N++++   ++  ++ +GF+ + TPL+ Y  +L +     +     +F
Sbjct: 57  GSMFFLPNGAKIFNKLIEFMKLQQKFK-FGFNEVVTPLI-YKKTLWEKSGHWENYADDMF 114

Query: 72  SLQ--DDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  D++ +   L+            +   +    P R     P+ RNE  G       
Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTR 174

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           ++                   + ++   ++ +    Y+      K   G      ++   
Sbjct: 175 LRK----FHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFST 230

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           + +  +  L+             + +L E   ++   +       +     +   ++  L
Sbjct: 231 RPDHFIGDLKV--------WNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVTDHL 282

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            K+       +               + E       + +       ++    + +   + 
Sbjct: 283 RKTHQVATIQLD------------FQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFM 330

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A+L                    GR+   ++ ++   +P    ++    +  AL+    +
Sbjct: 331 ALL---------------IDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRN 375

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                +M PV                     L       ++ + +    G ++K A  +N
Sbjct: 376 EREADDMEPVP--------------------LNDWHFNVDLDIRNEP-VGYRIKSAILKN 414

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGK 454
               II G  E       I++    K
Sbjct: 415 YSYLIIVGDEEVQLQKYNIRERDNRK 440


>gi|145594337|ref|YP_001158634.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|189083512|sp|A4X5V6|SYP_SALTO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145303674|gb|ABP54256.1| prolyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 595

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 23/170 (13%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALK---SLESSTNNIKEMGPVLITTMDHDS 387
           G  Y     + K   +   G  +G     +A +                 V +T +D  +
Sbjct: 429 GAEYLDADGQRKPLTMGCYGIGVGRLLACLAEEHRDERGLRLPVTIAPYQVHLTLLDDLA 488

Query: 388 DSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +  +  +     L  AG+         +  G +   AD    PL +  G    + G  +
Sbjct: 489 SAAGELARRVYDELWAAGVEVLFDDRDERA-GVKFADADVIGLPLRVTIGRRSVANGAAE 547

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           ++D A G                  AQ  +P  E+V+ + + +   + +I
Sbjct: 548 VRDRATG----------------VTAQ--VPFDEVVAELVRRIAALRADI 579



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R   +I   +R   E  G   +  P++  ++ L K           +   +D  
Sbjct: 42  YLPLGWRTIRKIEAVLRAELERVGGQEVSMPVVNPAE-LWKQTGRYFTIGPELARFRDRR 100

Query: 78  GQWISL 83
           G+ + L
Sbjct: 101 GRDLVL 106


>gi|239947855|ref|ZP_04699608.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241116864|ref|XP_002401645.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215493189|gb|EEC02830.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|239922131|gb|EER22155.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 635

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/382 (9%), Positives = 98/382 (25%), Gaps = 10/382 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV-----DNVGSSAETADAEMCMMMA 152
           +F         +                ++  +          +   +    +       
Sbjct: 254 HFQEEAQGMVFWHDKGWSIYNIIEQYIRKKIRKNGYIEVKTPVLVDKSLWEASGHWKKFR 313

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D + A+        +   N      I ++      D                   L G+ 
Sbjct: 314 DDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +T E +        +  +   +++            G +E+
Sbjct: 373 MRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFNDIKVKFSDRPEIRAGSDEV 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E   K          +     G  Y     +  +        +   +    V    
Sbjct: 433 WDKAENALKEAVEKAGFTYTLNPGEGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLPER 491

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                ++    +  P       +G     + +   E +      + P+ +      SD  
Sbjct: 492 LDASYIAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWITPIQVAVATITSDLN 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G+R ++ +   K    +++    +  P+  + G  E+    + I+ L
Sbjct: 552 DYALEVQKALIDNGVRTDINISPDK-INYKIREFSNQKIPMIAVIGKQEKENKQVTIRRL 610

Query: 451 AKGKELSREIKNNESWREARVA 472
              ++    I+   +  +   +
Sbjct: 611 GTTEQEVLSIEQLIALVKEENS 632



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +      +    +F+L
Sbjct: 261 GMVFWHDKGWSIYNIIEQYIRKKIRKNGYIEVKTPVLVDK-SLWEASGHWKKFRDDMFAL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 ET-DDKTLALKPMNCP 334


>gi|323336851|gb|EGA78113.1| Mst1p [Saccharomyces cerevisiae Vin13]
 gi|323347699|gb|EGA81963.1| Mst1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 462

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/446 (11%), Positives = 132/446 (29%), Gaps = 67/446 (15%)

Query: 14  GFADCPTKEIRIRNRILD--SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G         +I N++++   ++  ++ +GF+ + TPL+ Y  +L +     +     +F
Sbjct: 57  GSMFFLPNGAKIFNKLIEFMKLQQKFK-FGFNEVVTPLI-YKKTLWEKSGHWENYADDMF 114

Query: 72  SLQ--DDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  D++ +   L+            +   +    P R     P+ RNE  G       
Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTR 174

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           ++                   + ++   ++ +    Y+      K   G      ++   
Sbjct: 175 LRK----FHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFST 230

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           + +  +  L+             + +L E   ++   +       +     +   ++  L
Sbjct: 231 RPDHFIGDLKV--------WNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVTDHL 282

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            K+       +               + E       + +       ++    + +   + 
Sbjct: 283 RKTHQVATIQLD------------FQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFM 330

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A+L                    GR+   ++ ++   +P    ++    +  AL+    +
Sbjct: 331 ALL---------------IDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRN 375

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                +M PV                     L       ++ + +    G ++K A  +N
Sbjct: 376 EREADDMEPVP--------------------LNDWHFNVDLDIRNEP-VGYRIKSAILKN 414

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGK 454
               II G  E       I++    K
Sbjct: 415 YSYLIIVGDEEVQLQKYNIRERDNRK 440


>gi|289549510|ref|YP_003470414.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289179042|gb|ADC86287.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 638

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/358 (11%), Positives = 100/358 (27%), Gaps = 21/358 (5%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           +   N   +      +      +N+           Q   +  G      +      + +
Sbjct: 265 FYLSNGQFVRNQMENFLREIQLKNDYDEVRTPLMMNQKLWEESGHWDHYHENMYFTKVDE 324

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
              A+       H+          I +       D         +         L G+  
Sbjct: 325 NDYALKPMNCPGHML---------IFKNELRSYKDLPLRMAEFGQVHRHEFSGALNGLLR 375

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
           +      D++  F   + + SE  DI+     I          EL   +   E    EL 
Sbjct: 376 VRT-FCQDDAHIFIMKSQIKSEVEDILKLIDYIYSVFGFTYSIEL---STRPEDYLGELK 431

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
           + +E  +      + + +  TI  G   + G   +  +   +    Q   V        +
Sbjct: 432 LWNEAEQSLANVLDELGLKYTINEGDGAFYGPKIDVHIKDALNRSHQCATVQLDFQMPEK 491

Query: 334 YDGLVSRFKGQNV-----PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
           +D      + +           F        + ++  + +      M PV +  +    +
Sbjct: 492 FDLTYINEQNEKERPVVLHRAIFGSLDRFFGILIEHFKGAFPLW--MAPVQVNIIGVSDN 549

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           + +      + L+   IR  +     +  G +++ +  +  P  ++ G  E+   ++ 
Sbjct: 550 NTAYVNKVFEALQNNNIRVVID-DRDEKLGKKIRESQMKKIPYTLVLGDHEQENNVVS 606



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/395 (10%), Positives = 107/395 (27%), Gaps = 30/395 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G     +    +RN++ + +R I     +D + TPL+     L +     D  ++ ++  
Sbjct: 262 GMPFYLSNGQFVRNQMENFLREIQLKNDYDEVRTPLMMN-QKLWEESGHWDHYHENMY-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D    +L+             +        R+Y+  P+   E     R       + 
Sbjct: 320 TKVDENDYALKPMNCPG-------HMLIFKNELRSYKDLPLRMAEFGQVHRHEFSGALNG 372

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +M +     V           +             +    +  + 
Sbjct: 373 LLRVRTFCQDDAHIFIMKSQIKSEVEDILKLIDYIYSVFGF------TYSIELSTRPEDY 426

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  L+  ++ ++     +  L  +   +       G  +     D +         +   
Sbjct: 427 LGELKLWNEAEQSLANVLDELGLKYTINEGDGAFYGPKIDVHIKDALNRSHQCATVQLDF 486

Query: 254 ELYELVKGTIAGEKGFNE------------LVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           ++ E    T   E+   E            L     ++ +    +  + ++   V  +  
Sbjct: 487 QMPEKFDLTYINEQNEKERPVVLHRAIFGSLDRFFGILIEHFKGAFPLWMAPVQVNIIGV 546

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                      F  +      VV        +    +   + + +P T       +    
Sbjct: 547 SDNNTAYVNKVFEALQNNNIRVVIDD--RDEKLGKKIRESQMKKIPYTLVLGDHEQENNV 604

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
           + +    ++   E+  +         +  SK  + 
Sbjct: 605 VSAR-KYSHEDNELMDIQAFIAQLQEEVESKALLV 638


>gi|153952826|ref|YP_001393591.1| glycyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219853491|ref|YP_002470613.1| hypothetical protein CKR_0148 [Clostridium kluyveri NBRC 12016]
 gi|254781876|sp|B9DY74|SYG_CLOK1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|254781877|sp|A5N4L2|SYG_CLOK5 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|146345707|gb|EDK32243.1| GlyS [Clostridium kluyveri DSM 555]
 gi|219567215|dbj|BAH05199.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 463

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 32/122 (26%), Gaps = 21/122 (17%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +    + P  +  +        K      MLR            + + G + +  D   
Sbjct: 362 MHFHPAIAPFKVAILPLSKKLSEKALDVYNMLRK-DFNV--DYDDAGSIGKRYRREDEIG 418

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            P  I           + I+D                     + Q  + I EL   +K+ 
Sbjct: 419 TPYCITIDFDTMDNDTVTIRDRDT------------------MKQFRVKIDELKDFIKEK 460

Query: 489 LQ 490
           +Q
Sbjct: 461 IQ 462


>gi|150401716|ref|YP_001325482.1| glycyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|150014419|gb|ABR56870.1| glycyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 579

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 64/228 (28%), Gaps = 7/228 (3%)

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           F+  D  K +      +   + G+    ++ ++S+ + +   N     +++         
Sbjct: 358 FVEYDEPKEIETYEIELNYKVVGKVFKKDMKLVSDALNELDNNEMEKLVNTIKNGEEYIL 417

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
                E  +    +  K+   V   V G      ++    G +                 
Sbjct: 418 KVGDKEFTILEDYLTAKK---VQKKVMGEKVLPHVIEPSHGIDRITFCLLEHSFNEEE-- 472

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                S N       V +  + +              LR  GI AE     S   G +  
Sbjct: 473 DRTYLSINPTVSPIKVGVFPLVNKQGMPEIAMDIKNNLRKNGILAE--YDDSGAIGRRYM 530

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             D    P  I           + I++    +++  +I+    + + +
Sbjct: 531 RMDEVGAPFCITVDGQTLEDNTITIRERDSREQIRIKIEEVVDYIKNK 578


>gi|94985607|ref|YP_604971.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123079875|sp|Q1IY82|SYT_DEIGD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94555888|gb|ABF45802.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 649

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 40/110 (36%), Gaps = 3/110 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +   +    F      + + ++              +++  +       +  Q    
Sbjct: 513 QEHRPVMIHRAPFGSLERFVGILIEHYGGDFPFWLAPRQIMLIPIA--DRHNAYAQTLAN 570

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             + AG+RAE+   +++    +++ A+    P+ +I G  E +R  + ++
Sbjct: 571 EFKAAGLRAEVDDSNNR-MNAKVRNAELHKIPVMLIVGDQEEARREVSVR 619


>gi|269219602|ref|ZP_06163456.1| proline--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210844|gb|EEZ77184.1| proline--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 594

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 6/103 (5%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        V I     D    +  +     L   G   E+ L   +     +K+A
Sbjct: 482 RGLMWPASVAPAHVHIVAAGKDDALYAAAEEIAAGLEADG--VEVLLDDRRKVSAGVKFA 539

Query: 425 D--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           D      P  ++ G    + G+++I+D   G+ +   ++    
Sbjct: 540 DYELLGVPFGVVVG-RGLAEGLVEIRD-RAGETIEAPVEQARE 580



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  +I   +R   E  G   +  P L   +         D     +F L
Sbjct: 36  GIYTWLPLGLRVLRKIERIVREEMEAAGSQEVHFPALLPREPYEASGRWSD-YGPTLFKL 94

Query: 74  QDDDGQWISLRY 85
           +D       L  
Sbjct: 95  KDRKESDYLLAP 106


>gi|228908133|ref|ZP_04071981.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228851551|gb|EEM96357.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 640

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLRGIQKEYNYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/219 (10%), Positives = 61/219 (27%), Gaps = 5/219 (2%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNDKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AG+R E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYCSEVAHKLAQAGVRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                +  G +++ A  +  P  ++ G  E   G + ++
Sbjct: 575 D-ARDEKLGYKIREAQMQKVPYVLVIGDKEMESGAVNVR 612


>gi|315038857|ref|YP_004032425.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276990|gb|ADQ59630.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 645

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 500 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPIQAEIIPVNNDAHGEY 559

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   Q L   G RAE+    ++  G +++ +  +  P  ++ G  E   G + ++    
Sbjct: 560 AEKVRQELAKRGFRAEVD-NRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYGT 618

Query: 453 GKELSREIKNNESWREA 469
            +E+S+ + +     +A
Sbjct: 619 DEEISKSLDDFIKEIDA 635



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 55/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYRDDMF 316

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 317 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 376

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                +   A++  ++ D  +   I    + +   + K  +       
Sbjct: 377 REMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTEKYFANDE 436

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 437 MWERSQKM 444


>gi|281341862|gb|EFB17446.1| hypothetical protein PANDA_008118 [Ailuropoda melanoleuca]
          Length = 678

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 4/123 (3%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   Q    A    ++ L     
Sbjct: 553 ERMIAILTENFGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFTVDIDLDPGCT 612

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK---GKEL-SREIKNNESWREARVA 472
              +++ A        ++ G  E++ G + I+       G+   S  I+  +  +++R  
Sbjct: 613 LNKKIRNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTISETIERLQQLKQSRSK 672

Query: 473 QIT 475
           Q  
Sbjct: 673 QAE 675



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + +P + Y+  L          ++ +FS + + 
Sbjct: 300 FLPKGAYIYNTLIEFIRSEYRKRGFQEVVSPNI-YNSRLWMTSGHWQHYSENMFSFEVEK 358

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 359 -ELFALKPMNCPG 370


>gi|328774228|gb|EGF84265.1| hypothetical protein BATDEDRAFT_8061 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 581

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/460 (11%), Positives = 119/460 (25%), Gaps = 69/460 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI  R+ D +R+ Y  YGFD I TPL+ ++ SL +         + +   
Sbjct: 186 GAPFFLPHGTRIIQRLTDFLRHEYRKYGFDEIVTPLV-FNKSLWEKSGHWKNYKEDITVD 244

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q +D    +L+             +        R+YR  P+   E     R         
Sbjct: 245 QLNDADIQALKPMNCPG-------HCLLFSSTSRSYRDLPIRYAEFSPLHRNEASGALTG 297

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +    +   + +                       +    +      
Sbjct: 298 LTRVRKFHQDDGHIFCTPSQIAQEIQSTLKFIDTMYTKILHFPQYTLALSTRPES---GH 354

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +  L   +  +    + +         ++      G  +  +  D +             
Sbjct: 355 VGTLTQWEAAETALKEALTQFGKPWTINHGDGAFYGPKIDIKVRDAIGR----------- 403

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                                 +  V+       + ++  +  +            ++  
Sbjct: 404 -------------------DHQTATVQLDFQLPKQFQLQYSTGKTGPEDAAMETPVMIHR 444

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            V+   ++ +   +   GG++   +S  +   +P        ++ +    +  S  +   
Sbjct: 445 AVLGSVERMLAILAEHYGGKWPFWMSPRQAIVIPTNKTLNEYAQSVKNNIANPSELDGSN 504

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                    +D     LSK     Q+L                   Q  Y         +
Sbjct: 505 SCSAYYHIEVDDSDHLLSKRVREAQLL-------------------QFNY--------IL 537

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           + G  E+  G + ++    GK+L     +      A+  Q
Sbjct: 538 VVGDKEQETGTVNVRS-RTGKQLGLMTVDQLRALFAKNTQ 576


>gi|325957298|ref|YP_004292710.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333863|gb|ADZ07771.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327184028|gb|AEA32475.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 644

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 500 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPIQAEIIPVNNDAHGEY 559

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   Q L   G RAE+    ++  G +++ +  +  P  ++ G  E   G + ++    
Sbjct: 560 AEKVRQELAKRGFRAEVD-NRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYGT 618

Query: 453 GKELSREIKNNESWREA 469
            +E+S+ + +     +A
Sbjct: 619 DEEISKSLDDFIKEIDA 635



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 55/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYRDDMF 316

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 317 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 376

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                +   A++  ++ D  +   I    + +   + K  +       
Sbjct: 377 REMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTEKYFANDE 436

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 437 MWERSQKM 444


>gi|239636259|ref|ZP_04677261.1| prolyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239597614|gb|EEQ80109.1| prolyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 567

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 5/94 (5%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   IR   E      I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNISKIIREEMEKVDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR 93
                  +  L+D +G+  +L     ++   L R
Sbjct: 86  WGAYGPELMRLKDRNGREFALGPTHEEVVTSLVR 119



 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 3/103 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++      LIT      +           L        ++    +  G +   AD 
Sbjct: 462 IWPKSVTPFDLHLITINPKKEEQRKLGDQLYDQL-MNNYDV-LYDDRQERAGVKFNDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              PL ++ G      G++++K  + G+     I + E++ + 
Sbjct: 520 IGLPLRVVVGKR-AEEGIVEVKQRSTGESEEIHIDDLENYIKD 561


>gi|197334450|ref|YP_002155444.1| prolyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|226701355|sp|B5FBD6|SYP_VIBFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|197315940|gb|ACH65387.1| prolyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 571

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 48/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRRLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   D E      D +     K  D        
Sbjct: 146 RFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLEYRP 194



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +     L   GI   +F    +  G  
Sbjct: 461 DEYGIVWPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELTAMGIEV-LFDDRKERPGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            K  +    P  I+ G      G  + K+     + + E+ N     +A+++
Sbjct: 520 FKDIELIGIPHTIVIGDRSMDEGNFEYKNRRANTKEAVEMANIVEHIKAQLS 571


>gi|167589762|ref|ZP_02382150.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ubonensis
          Bu]
          Length = 406

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G      + + +   + + IR      GF  + TP +  S +L +     ++  + +FSL
Sbjct: 24 GAVFWHPRGMALYRVVEEYIRERMRQAGFAEVRTPQI-ASRALWEQSGHWEKFGRNMFSL 82

Query: 74 QDDDGQWISLRY 85
           D DGQ   L+ 
Sbjct: 83 -DSDGQPFCLKP 93



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 66/254 (25%), Gaps = 7/254 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++        + +E         +I  +         +    +   G + L   SE + 
Sbjct: 144 DDAHVLCMEDQVEAEVARFCRLLKTIYADFGFDRFDVALSTRPSVRAGDDALWDRSESML 203

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
                S  +        G  Y     +  +       +        V     G       
Sbjct: 204 ALAARSAGLHFEIQQGEGAFYGPKLEFHLLDRQGRKWQCGTIQLDFVLPERLGATYVSES 263

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            ++     +           + + L+  E           +++  +  ++   +      
Sbjct: 264 GAKATPVMLHHAVLGSLERFIGILLEHHEGWLPTWLAPDQIVVANIGDEARPFADSAALA 323

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
               T G R        +        A     P+  + G  E   G + ++ L  G+  +
Sbjct: 324 FE--TIGCRVLRDFRPERLPRKIFD-ARELAAPIFAVAGPKEAQSGAVSLR-LRNGERHA 379

Query: 458 REIKNNESWREARV 471
             I +  ++ E RV
Sbjct: 380 LSIGDALAYLEKRV 393


>gi|91204601|emb|CAJ70829.1| strongly similar to prolyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 576

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +  G          + N+++  +R      G   +  P L++ D L K     D     
Sbjct: 34  RITSGAYAYLPLGTLVLNKVIAIVREEMNRSGAIEVFLPALQHLDLL-KESGRLDVFGAD 92

Query: 70  VFSLQDDDGQWISLRY 85
           + + QD  G+   L  
Sbjct: 93  LITFQDRHGKETVLSP 108



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 3/114 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSSKNFGNQLKYAD 425
               ++     ++I     D+  +   +     +    GI   +     +  G + K AD
Sbjct: 461 IWPMSLAPYHVIIIPVNVKDTICMDAARSIYDDMTNMKGIDVLLDDRDLR-PGVKFKDAD 519

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
               P+ II G        L+IK    G+     I+N +   E R+ Q  I   
Sbjct: 520 LIGIPVKIIIGKKYTETKELEIKLRKSGEVFLTHIENTKQELE-RILQHLIKTE 572


>gi|27468275|ref|NP_764912.1| threonyl-tRNA synthetase 1 [Staphylococcus epidermidis ATCC 12228]
 gi|293366369|ref|ZP_06613048.1| threonine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258358|sp|Q8CS74|SYT_STAES RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|27315821|gb|AAO04956.1|AE016748_190 threonyl-tRNA synthetase 1 [Staphylococcus epidermidis ATCC 12228]
 gi|291319494|gb|EFE59861.1| threonine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329733742|gb|EGG70068.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737259|gb|EGG73513.1| threonine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 645

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/371 (10%), Positives = 95/371 (25%), Gaps = 18/371 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +           +   + +         Q D+       E     +  M  
Sbjct: 279 RYIVDK--EVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                +   +   +  +  R    G + +    G     +R+  +   D         +K
Sbjct: 337 PHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIK 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +   +   D  K      +    +      D  K   +     K     ++  +EL
Sbjct: 397 EEF-KRVVNMIQDVYKDFGF-EDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDEL 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +  E           I  ++     L+                           +   G
Sbjct: 455 GLTYE---------EAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIG 505

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +               +        +    +  + +         V I  ++ D      
Sbjct: 506 QDGEQHRPVVIHRGVVSTME---RFVAFLTEETKGAFPTWLAPMQVEIIPVNID-LHYDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            ++    L++ G+R E+    ++  G +++ A  +  P  I+ G  E     + ++    
Sbjct: 562 ARLLQDELKSQGVRVEID-DRNEKMGYKIREAQMKKIPYQIVVGDQEVEHQEVNVRKYGS 620

Query: 453 GKELSREIKNN 463
            K+ S E    
Sbjct: 621 EKQESVEKDEF 631


>gi|312384017|gb|EFR28854.1| hypothetical protein AND_02684 [Anopheles darlingi]
          Length = 766

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 65/226 (28%), Gaps = 21/226 (9%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           EK   E+ V +E  +    + ++         G   + G   +  +   +    Q   + 
Sbjct: 456 EKYLGEIEVWNEAEKALAESLDKFGEPWKENPGDGAFYGPKIDITIMDALKRHHQCATIQ 515

Query: 326 GSVGGGGRYD-GLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                  R++   V     +  P       +G    ++A+ +   +      + P  +  
Sbjct: 516 LDFQLPIRFNLNYVDDSGEKKRPVIIHRAVLGSVERMIAILTENYAGKWPFWLSPRQVMV 575

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +                L  AG   E  L +      +++ A        ++ G  ERS 
Sbjct: 576 VPVGPAYDEYADKVRLRLHDAGFTVEADLDAGDTMNKKIRNAQLAQFNFILVVGEKERSS 635

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
             + ++                           + + ELV+ + K+
Sbjct: 636 ETVNVR------------------TRDNKVHGEVTVDELVTKLAKL 663



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR  Y   GF  + +P + Y+  L +         + +FS +  +
Sbjct: 298 FQPKGAFIYNTLMNFIRAEYRKRGFQEVISPNI-YNAKLWQTSGHWQHYAENMFSFE-SE 355

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 356 KETFALKPMNCPG 368


>gi|270290442|ref|ZP_06196667.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304384676|ref|ZP_07367022.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270281223|gb|EFA27056.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304328870|gb|EFL96090.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 647

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 54/202 (26%), Gaps = 2/202 (0%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +    +G+  + TP+L   D+  K         + +F  
Sbjct: 263 GLPYWMPNGATIRRTIERYIIDKEVQHGYQHVYTPVLMNLDAY-KTSGHWQHYREDMFPP 321

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            D   G+ + LR        +    +  +            +    +            +
Sbjct: 322 MDMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 381

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
           +         A  ++       L+ +     D+ I     ++     E    + DD    
Sbjct: 382 MTLNDGHTFVAPDQIQEEFKKVLQLMVEVYRDFDITDYTFRLSYRDPENTEKYFDDDEMW 441

Query: 193 RLIVLRAIDKLDKFGLQGVKLL 214
                     +D  GL  V+  
Sbjct: 442 NHSQSMLKAAMDDLGLDYVEAE 463


>gi|188590702|ref|YP_001920953.1| threonyl-tRNA synthetase 1 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188500983|gb|ACD54119.1| threonyl-tRNA synthetase 1 [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 344

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 2/92 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +    D++   Q     L+   IR E  L  ++ F  ++K A     P  +I G  
Sbjct: 244 QVVIIPTTLDNIKYSQQIEYHLKEIDIRIECDLRDTR-FNKKIKQATLNRTPYIVIVGDK 302

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           E    M+ I++    ++    +++     + +
Sbjct: 303 ESKNNMVTIRN-RNNEQQFLTLEDFIQKLDTK 333


>gi|289673639|ref|ZP_06494529.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           syringae FF5]
          Length = 192

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 4/126 (3%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-AR 93
            I+   G +    P L   D+  +     +     +++ +D  G+   L  + TA    R
Sbjct: 9   AIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIG-QMWAFEDKAGRPCCLIPEATALFQER 67

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
             +E           + +   +R E+   GR+R+F Q  ++ +G S + A      +   
Sbjct: 68  --SEALLEGRREALFFYVARCYRYERPQAGRYREFTQLGLEILGPSPQQALLRSQAICTG 125

Query: 154 TLEAVG 159
            L+++G
Sbjct: 126 FLDSLG 131


>gi|229915814|ref|YP_002884460.1| tRNA synthetase class II (G H P and S) [Exiguobacterium sp. AT1b]
 gi|229467243|gb|ACQ69015.1| tRNA synthetase class II (G H P and S) [Exiguobacterium sp. AT1b]
          Length = 307

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 6/120 (5%)

Query: 8   RAELPRGFADCPTKEIRI-RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +P G+ +  + ++   +  +L  +    E+ G+  I+ PLLEY              
Sbjct: 7   KGSIPEGWYELQSGDVIRPKRWMLSFLEK-AESSGYAVIDPPLLEYYSHYQNLA---LFD 62

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAE-NFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
               + L  +DG+ + +R D T  +AR +A+ +    V          V  + +    + 
Sbjct: 63  ESAYYRLFGNDGELLVMRPDYTLQIARKLADGHEPMRVAYAGAVYRRTVKHSGQPHERQQ 122


>gi|172087674|ref|YP_204065.3| prolyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|59479390|gb|AAW85177.1| prolyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 575

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 48/169 (28%), Gaps = 8/169 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 35  MIRRLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 93

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +       +     +       
Sbjct: 94  GPELLRFTDRHVRPFVLSPTAEEVITSLVRNEVSSYKQLPLNLYQIQ----TKFRDERRP 149

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           RF      +   + + +   + E      D +     K  D        
Sbjct: 150 RFGVMRAREFCMMDAYSFDINKEGLQKSYDAMHDAYCKAFDRMGLEYRP 198



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+           +     L   GI   +F    +  G  
Sbjct: 465 DEYGIVWPEAIAPFTVAIVPMNMHKSERVKEAAEKLYAELTAMGIEV-LFDDRKERPGVM 523

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            K  +    P  I+ G      G  + K+     + + E+ N     +A+++
Sbjct: 524 FKDIELIGIPHTIVIGDRSMDEGHFEYKNRRANTKEAVEMANIVEHIKAQLS 575


>gi|228909643|ref|ZP_04073466.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228849932|gb|EEM94763.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 566

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDCLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEMALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ +K +  +
Sbjct: 272 IEADKCIKSM 281



 Score = 43.7 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD   +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDVQREMGENIYNSLQEKGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|167842004|ref|ZP_02468688.1| prolyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 578

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138


>gi|160880797|ref|YP_001559765.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160429463|gb|ABX43026.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 584

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + I+N +LD  R ++E  G+  I TP++  + +L +     D   + ++  
Sbjct: 214 GFPFFLPKGMVIKNLLLDYWRKLHEREGYVEISTPMM-LNRNLWETSGHWDHYKENMYQT 272

Query: 74  QDDDGQWISLRYDLTAP 90
           +  D +  +++      
Sbjct: 273 KI-DDEIYAIKPMNCPG 288



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/371 (10%), Positives = 98/371 (26%), Gaps = 39/371 (10%)

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
                          + +    ++  I  ++  +          +      + + + ++ 
Sbjct: 248 PMMLNRNLWETSGHWDHYKENMYQTKIDDEIYAIKPMNCPGGMLVYGSKPRSYKELPLRF 307

Query: 163 NDYHIGINNRK--ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
            +  +   + K   L G++       DD        L   ++  K  ++GV  L+ E   
Sbjct: 308 GELGLVHRHEKSGQLHGLMRVRCFTQDDA------HLFMTEEQIKDEIKGVVRLIDEVYK 361

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
                +    +   E           +   S+ +            +      +I+E   
Sbjct: 362 KFGFTYHVELSTRPE-----------NSIGSLEDWEIATDALKMALEEMELPYLINEGDG 410

Query: 281 KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
                     +  +I R  +  +    ++  L F +            +           
Sbjct: 411 AFYGPKIDFHLKDSIGRTWQCGSIQLDFQLPLRFGIEYIGADGEAHRPIM---------- 460

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                 +    F        + ++              V I T+    +     Q     
Sbjct: 461 ------IHRVIFGSIERFFGILIEHYAGRFPTWLAPVQVKILTVSEQFN--DYAQDILME 512

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L+  GIR  +    S+  G +++ A     P  +I G  E     + + +  +G      
Sbjct: 513 LKQQGIRVSLD-SRSEKLGYKVREARLDKIPYVLIIGQMEMENKQVSVWNREEGDLGGYV 571

Query: 460 IKNNESWREAR 470
           +++  S  +  
Sbjct: 572 VEDLISLIKKE 582


>gi|313205743|ref|YP_004044920.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Riemerella
           anatipestifer DSM 15868]
 gi|312445059|gb|ADQ81414.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Riemerella
           anatipestifer DSM 15868]
 gi|315022861|gb|EFT35885.1| threonyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
          Length = 641

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/354 (11%), Positives = 106/354 (29%), Gaps = 14/354 (3%)

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                 +++   +S                  VG +     +   +   +    +     
Sbjct: 292 MTPHIGNIELYKTSGHYEKYGADSFQPIKTPHVGEEFLLKPMNCPHHCEVYKAQQWSYKD 351

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              +  E   V R     +  GL  V+     G T +        +   E+ + ++  + 
Sbjct: 352 LPKRYAEFGTVYRYEQSGELHGLTRVR-----GFTQDDAHLFCTPDQLLEEFEKVIDLV- 405

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           + + KS+     + + ++  ++   + +   E   K+         +  +   +EY    
Sbjct: 406 LYVFKSLGFEDFIAQVSLRDKENRAKYIGSEENWEKAESAIITAAKNKGLNTVVEYGEAA 465

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGG----GRYDGLVSRFKGQNVPAT---GFSIGISRL 358
            Y   L F V +   +    G++        R+D        +            G    
Sbjct: 466 FYGPKLDFMVKDALGRSWQLGTIQVDYNLPERFDLTYVGSDNERHRPIMIHRAPFGSMER 525

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            +A+    ++ +    + P     +          +  +Q+L    I   +    ++  G
Sbjct: 526 FIAILIENTAGDFPLWLNPDQYILLPISEKYTDYAKKVSQLLENHDI-CGLVDERNEKTG 584

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +++ A+ +  P  +I G  E     + ++   +G      I++   + +    
Sbjct: 585 KKIRDAEMKKIPFMLIVGENEAGNQTVSVRKRGEGDLGEMSIESFVEYFKNEAK 638



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 15/47 (31%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R ++   +       G++ + TP +   +      
Sbjct: 260 GLPLWLPKGAALRKKLESFLSEAQRKGGYEFVMTPHIGNIELYKTSG 306


>gi|115438072|ref|XP_001217972.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114188787|gb|EAU30487.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1972

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 103/345 (29%), Gaps = 38/345 (11%)

Query: 10   ELPRGFADC--------PTK--EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKF 59
            + PR F D              E+ ++  + + +  I+  +G        +E S  +   
Sbjct: 1600 QSPRKFEDIAWDMDSRSYPAANELLVQGLVKERLTAIFRKHG-------AVETSRQML-- 1650

Query: 60   LPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
             P     N G   L D  G  + L +DLT P AR ++    T+               E 
Sbjct: 1651 FPRSQHYNNGAMRLLDASGNLLQLPFDLTLPNARSISRQDPTLEKSFAFG----TVYREM 1706

Query: 120  HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
               G  R   + D D V  +A     ++ +  A+ ++ +     ++         L    
Sbjct: 1707 PHGGEPRTHKEVDFDIVSHNAL----DLALKEAEVIKVLDEIIEEF-------PPLRSAS 1755

Query: 180  EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
                ++  D L   +   R          + V  L     T         +         
Sbjct: 1756 MCFLVNHSDLLQLIMEFCRITPSQIPLVKEIVSKLNVGKWTMQKIRSELRSPAIGVASTS 1815

Query: 240  MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-IVRG 298
            +      D   S  +    +K  + G K    L  I   +           +     V  
Sbjct: 1816 LDDLARFDFRDSPKQTQRRLKSIMEGTKFAERLAPIFARINLLMTYLQSFDVKRKVYVNP 1875

Query: 299  LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
            L       +   + F  + + ++  VF     GGRYD L+  F+ 
Sbjct: 1876 LGSLNDKFFRGSILFQCVFDTKRRDVF---AAGGRYDSLIQEFRP 1917


>gi|300690369|ref|YP_003751364.1| proline--tRNA ligase [Ralstonia solanacearum PSI07]
 gi|299077429|emb|CBJ50055.1| Proline--tRNA ligase [Ralstonia solanacearum PSI07]
          Length = 574

 Score = 55.2 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 39/109 (35%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R   ++   +R      G   +  P+++  + L +     D+ 
Sbjct: 31  MIKKLGAGIYTYMPVGLRAIRKVEQIVREEMNAAGAVEMLMPVVQPGE-LWQETGRWDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            + +  ++D   + + ++    ++   +AR    ++  +       +  
Sbjct: 90  GEELMRVKDRHERDLVIQPTSEEVVTDIARTEIRSYKQMPVNFYQIQTK 138



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 3/87 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V+I  + +D      ++       L  AGI   +     +  G  
Sbjct: 463 DARGIIWPVSIAPFEVVICPVGYDRSEAVRAEADRLHAELAAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQI 447
               +    P  ++ G      G L++
Sbjct: 522 FADWELIGVPFRVVVGERGLKEGKLEL 548


>gi|148656401|ref|YP_001276606.1| proline--tRNA ligase [Roseiflexus sp. RS-1]
 gi|148568511|gb|ABQ90656.1| Proline--tRNA ligase [Roseiflexus sp. RS-1]
          Length = 571

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 1/88 (1%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               +       V +  +     +          L  AGI   ++    +  G +   AD
Sbjct: 464 GIVWSPEIAPFHVHLVRLGKQDATRQAADALYDELTAAGIAV-LYDDRDETAGVKFNDAD 522

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKG 453
               PL ++ G    S G++++K  A G
Sbjct: 523 LIGAPLRLVIGDRFLSDGLVEVKQRASG 550


>gi|330685674|gb|EGG97315.1| proline--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 567

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 5/94 (5%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   ++     G         R+ N I   IR   E      I  P L+ ++ L +    
Sbjct: 28  KAGLIKQST-SGIYSYLPLATRVLNNISKIIREEMEKVDAVEILMPALQQAE-LWEESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR 93
                  +  L+D +G+  +L     ++   L R
Sbjct: 86  WGAYGPELMRLKDRNGREFALGPTHEEVVTSLVR 119



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 3/103 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++      LIT      D           L        ++    +  G +   AD 
Sbjct: 462 IWPKSVTPFDLHLITINPKKEDQRELGNQLYDQL-MNNYDV-LYDDRQERAGVKFNDADL 519

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              P+ ++ G      G++++K  + G+     I + E++   
Sbjct: 520 IGLPIRVVVGKR-AEEGIVEVKQRSTGESEEIHIDDLENYIND 561


>gi|319778289|ref|YP_004129202.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108313|gb|ADU91059.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 646

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/139 (11%), Positives = 36/139 (25%), Gaps = 4/139 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   I  ++   +R +Y   G+  I+ P +   D  L K     D   + +F+
Sbjct: 266 GLIFWHPKGWTIWQQVEQFMRKVYVENGYQEIKAPQI--LDLGLWKKTGHWDNYKENMFT 323

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            Q ++ +   L+        +       +       Y         +             
Sbjct: 324 TQSEN-REYGLKPMNCPGHVQIYNSTLHSYRELPIRYGEFGQCHRNEPSGSLHGMMRVRG 382

Query: 133 VDNVGSSAETADAEMCMMM 151
                      + ++    
Sbjct: 383 FTQDDGHIFCTEDQLLAEC 401



 Score = 39.8 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/341 (8%), Positives = 80/341 (23%), Gaps = 6/341 (1%)

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
             ++    R      G         +D                M  T             
Sbjct: 278 WQQVEQFMRKVYVENGYQEIKAPQILDLGLWKKTGHWDNYKENMFTTQSENREYGLKPMN 337

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              + +I +  L            E     R        G+  V+    +       +  
Sbjct: 338 CPGHVQIYNSTLHSYRELPIRY-GEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQ 396

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
             A   +    +   +      + ++++    +  I  ++ +++         K      
Sbjct: 397 LLAECLAFTALLQKVYKEFGFTEVLYKIATRPEKRIGADEIWDKAEKALMESLKQSGCEF 456

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
            I        G +     + +AI         Q      +  G    D   +R     + 
Sbjct: 457 EISPGEGAFYGPKIE-YTLKDAIGRHWQCGTIQVDFSMPARLGAEYVDADDTRKTPVMLH 515

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                     + + +++   +           +                   L     R 
Sbjct: 516 RAILGSLERFIGMLIENYSGAMPPWLSPEH--VVVCPISEAFNDYALEVQTKL-NQKFRV 572

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           ++ L  ++    +++    +  P  ++ G  ERS   + ++
Sbjct: 573 KVDL-RNEKITKKIRENSMQKIPYILVVGEKERSSSSVAVR 612


>gi|169334057|ref|ZP_02861250.1| hypothetical protein ANASTE_00450 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258774|gb|EDS72740.1| hypothetical protein ANASTE_00450 [Anaerofustis stercorihominis DSM
           17244]
          Length = 466

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/231 (8%), Positives = 57/231 (24%), Gaps = 8/231 (3%)

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D  K      +     +       E +   +  ++   + +             +     
Sbjct: 238 DEMKWFEYWRQYCFDFLVSLGIDKENIKFRDHAKEQLSHYSNATTDIEYNYPFGWGELWG 297

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
                 F + + ++              +         +V A      +       ++LE
Sbjct: 298 IADRTDFDLKSHEEFSGKDMKYVDPITNEKFHPYCIEPSVGAGRLFFTLLCDNYVEETLE 357

Query: 367 -----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +       + P  +  +        +       L  A     +    + N G + 
Sbjct: 358 DGTTRNVFKLHPYLAPYKVAVLPLTKKLSEEATEVYSKL--AKYF-MVDYDEAGNIGKRY 414

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  D    P  +      +  G + ++D    ++   +I +   +   +V 
Sbjct: 415 RRQDEIGTPYCVTIDFDTKEDGAVTVRDRDTMEQERVKIDDLADYITKKVE 465


>gi|313623934|gb|EFR94040.1| prolyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 568

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 73/253 (28%), Gaps = 12/253 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G             +I   +R   E  G   +  P L+ ++ L             
Sbjct: 34  QVASGIYSYLPLATLTLRKIEAIVREELEAIGAAEMLMPALQPAE-LWHESGRWADYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  L+D   +   L     +L   L R   +++  +          +R     R      
Sbjct: 93  LMRLKDRAARDFVLGPTHEELITSLLRDEIKSYKRLPITLYQIQTKFRDEKRPRFGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
             F             S +     M    ++     G++         +    +    K 
Sbjct: 153 REFIMKDAYSFHATSESLDETFELMHQAYSNIFSRCGLEFRSVIADSGSIGGNES---KE 209

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   D   + +    A D      +  V L + +   +   +  K A    + I  +V 
Sbjct: 210 FMALSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKELEKVATENQKTIADIVE 268

Query: 243 FLSIDLEKSMHEL 255
           FL + +EK+M  +
Sbjct: 269 FLEVPIEKTMKSM 281



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNMKSEEQVAFAESLYDSLQKAGFSVLIDDRTERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDEL 557


>gi|309788453|ref|ZP_07683057.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308923835|gb|EFP69338.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 622

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 92/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++     +  S ++       +  +   ++   E
Sbjct: 574 LVCGDKEVESGKVAVRTRRGKELGSMDVNEVIEKLQQEIRSRSLKQLE 621



 Score = 38.7 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 351


>gi|298528346|ref|ZP_07015750.1| prolyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511998|gb|EFI35900.1| prolyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 577

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R   +I + IR     +    +  P ++  D L K     +  
Sbjct: 31  MIRKLTAGIYTYLPAGWRALQKISEVIRGEMNRFYAIELLMPAVQPGD-LWKETGRWEAY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
            K +   +D   +   +  
Sbjct: 90  GKELLRFRDRHDRDYCIGP 108



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 28/91 (30%), Gaps = 3/91 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL-GSSKNFGNQLKYADRRNCPLA 432
                +I     D    +  +     L +  +   +        F    K  D    PL 
Sbjct: 469 PFEVTIIALNPKDEMVRNHSESLYNELCSQNVDVLLDDRDERPGFK--FKDCDLVGSPLQ 526

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +I G      G+L++K+   G      +++ 
Sbjct: 527 VIVGAKGIKNGVLEVKERHSGHRHELPLEDF 557


>gi|189424968|ref|YP_001952145.1| prolyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|226701293|sp|B3E1X5|SYP_GEOLS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|189421227|gb|ACD95625.1| prolyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 576

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/109 (8%), Positives = 33/109 (30%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R   +    +R      G   +  P ++ ++   +      + 
Sbjct: 31  MIRKIAAGIYTYMPLGLRSIRKFEQIVREEMNRAGAIELLMPGVQPAELWIES-KRWAQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            K +   +D       +     ++   +AR   +++  +       +  
Sbjct: 90  GKELLRFKDRKDNEFCMGPTHEEIITDIARREVKSYRQMPVNFYQIQTK 138



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V+      D   ++  Q     L  AG+   +     +  G + K  D    PL I+
Sbjct: 473 HCSVVAINAQKDEAVMAAAQDIHDRLEAAGVEVLLDDRDER-PGVKFKDHDLIGIPLRIV 531

Query: 435 QGTGERSRGMLQIKDLAKGK 454
            G    + G ++ K  A G+
Sbjct: 532 VGGKNLAEGNVEFKQRAGGE 551


>gi|308183917|ref|YP_003928050.1| threonyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308059837|gb|ADO01733.1| threonyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 612

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEELKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDREKQTQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEHNHAE 480


>gi|294631730|ref|ZP_06710290.1| prolyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292835063|gb|EFF93412.1| prolyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 567

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 51/141 (36%), Gaps = 5/141 (3%)

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV---LITT 382
                  + D L    K   V    + IG+SR + AL    +  + +     V    +  
Sbjct: 421 RKYTDALKLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQHADEHGLVWPAEVAPADVHV 480

Query: 383 MDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +       ++     +Q L  AG+R  +   +  + G +   A+    P  ++ G     
Sbjct: 481 VAAGKALQTEVALDVSQKLAAAGVRVLVDDRAGVSPGVKFTDAELIGVPQILVAGRR-AG 539

Query: 442 RGMLQIKDLAKGKELSREIKN 462
            G+L++K+   G+     ++ 
Sbjct: 540 EGVLELKNRRTGEREELTVEE 560



 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+   +   +R   +  G   +  P L   +         D     +F L+D  
Sbjct: 48  WLPLGRRVLANVERIVREEMDAIGAQEVLLPALLPKEPYEA-TGRWDEYGGELFRLKDRK 106

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 107 GGDYLLGP 114


>gi|124486137|ref|YP_001030753.1| hypothetical protein Mlab_1319 [Methanocorpusculum labreanum Z]
 gi|124363678|gb|ABN07486.1| threonyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 586

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN +LD  R ++   G+  I TPL+     L +     D     +++ 
Sbjct: 213 GFPFFLPNGMIVRNSLLDYWRELHAENGYQEISTPLIMNR-CLWETSGHWDHYKDNMYAT 271

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
              D +   ++           A 
Sbjct: 272 CI-DDEDYCIKPMNCPGGVMVYAN 294



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/356 (12%), Positives = 91/356 (25%), Gaps = 35/356 (9%)

Query: 96  AENF-DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADT 154
           AEN    I  P    R                     D ++           + +   + 
Sbjct: 237 AENGYQEISTPLIMNRCLWETSGHWDHYKDNMYATCIDDEDYCIKPMNCPGGVMVYANEP 296

Query: 155 LEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL 214
                +      +G+ +R  L G L  +        ++  I +R         + GV  L
Sbjct: 297 HSYRELPMRLAELGLVHRHELKGTLHGLFRVRCFTQDDAHIFMRKN--QISDEIAGVVRL 354

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
           + E  T    ++    +   E           +   S  +      G             
Sbjct: 355 INEVYTKFGFEYFLELSTRPE-----------NSMGSDEDWEAATNGLKDALDLLKLPYT 403

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
           I+E             +   + R  +  T    ++  + F +    +       +     
Sbjct: 404 INEGDGAFYGPKIDFHLKDCLGRTWQCGTIQLDFQMPINFDLAYVDENDERQRPIM---- 459

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                       +    F      + +  +                +  +   S+S ++ 
Sbjct: 460 ------------IHRVCFGSIERFIGILTEHFAGRFPVWLAPMQAKVLLVTKKSESYAE- 506

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCPLAIIQGTGERSRGMLQIK 448
                ML+ A IR E+    ++  G  ++ A      P  II G  E     + I+
Sbjct: 507 -EIYAMLKDAKIRCELD-NRNEKIGYMIRQAHYTERVPYMIIIGEKELEDHTVSIR 560


>gi|317008795|gb|ADU79375.1| threonyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 612

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFAFKLKEALKKHDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRSAEKQKIPMILVLGNEEVESEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/386 (10%), Positives = 93/386 (24%), Gaps = 29/386 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSTIL-------------DFTHKIMQAFGFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE------------LVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            L E  K     E    E                  ++ +    +    ++ T +  +  
Sbjct: 463 NLPERFKLAFTNEYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPI 522

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                  A      + +    V           +  V   + Q +P              
Sbjct: 523 NEEHHVFAFKLKEALKKHDIFVEVLDKN--DSLNKKVRSAEKQKIPMILVLGNEEVESEI 580

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDS 387
           L   +       +M       M    
Sbjct: 581 LSIRDREKQAQYKMPLKEFLNMVESK 606


>gi|15644753|ref|NP_206923.1| threonyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501057|sp|P56071|SYT_HELPY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2313207|gb|AAD07192.1| threonyl-tRNA synthetase (thrS) [Helicobacter pylori 26695]
          Length = 612

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQDQYKMPLKEFLNMVESKMQEVS 611



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSQALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEYNHAE 480


>gi|326492063|dbj|BAJ98256.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326499331|dbj|BAK06156.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 667

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 2/94 (2%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +   ++ L         L++ GIRAE+  G        ++ A+ +  PL  + G  E  
Sbjct: 574 ILPVTNNELQYCNEVASELKSRGIRAEVCHGER--LPKLIRNAETQKVPLMAVVGPKEVE 631

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
              L I+    G+  +  + N  S  ++ VA  +
Sbjct: 632 ARTLTIRSRHNGEMGTMPVDNFISKIQSAVADKS 665



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR+ + DS +  +   G+D + TP +  +D L K     D   + +++ 
Sbjct: 291 GLVFWHPKGAIIRHILEDSWKQTHLQRGYDLLYTPHVAKAD-LWKISGHIDFYKENMYNQ 349

Query: 74  QDDDGQWISLRYDLTA 89
            D + +   LR     
Sbjct: 350 MDVEDEPYQLRPMNCP 365


>gi|313619139|gb|EFR90927.1| prolyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 409

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 74/253 (29%), Gaps = 12/253 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G        I    +I   +R   E  G   +  P L+ ++ L             
Sbjct: 34  QVASGIYSYLPLAILTLRKIEAIVREELEAIGAAEMLMPALQPAE-LWHESGRWADYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +  L+D   +   L     +L   L R   +++  +          +R     R      
Sbjct: 93  LMRLKDRAARDFVLGPTHEELITSLLRDEIKSYKRLPITLYQIQTKFRDEKRPRFGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
             F             S +     M    ++     G++         +    +    K 
Sbjct: 153 REFIMKDAYSFHATSESLDETFELMHQAYSNIFSRCGLEFRSVIADSGSIGGNES---KE 209

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            +   D   + +    A D      +  V L + +   +   +  K A    + I  +V 
Sbjct: 210 FMALSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKELEKVATENQKTIADIVE 268

Query: 243 FLSIDLEKSMHEL 255
           FL + +EK+M  +
Sbjct: 269 FLEVPIEKTMKSM 281


>gi|257055413|ref|YP_003133245.1| glycyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585285|gb|ACU96418.1| glycyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 463

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/230 (10%), Positives = 55/230 (23%), Gaps = 14/230 (6%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           + E  E         +         E +      +  I+       G E+          
Sbjct: 233 IDERTEWYVDLGIRRENLRHYEHPKEKLSHYSKRTVDIEYRFRFSSGQEWGELEGIANRT 292

Query: 312 GFPVMNEKQKPVV----FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            F +        V    F    G      ++    G       F +          +   
Sbjct: 293 DFDLTTHSNHSGVDLSYFDQASGQRYRPFVIEPAAGVGRAMMAFLLDAYTEDEVPNAKGG 352

Query: 368 ST-------NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                    +       V +  +  ++D   K +     LR      +     +++ G +
Sbjct: 353 MDKRVVLKLDPRLAPYKVAVLPLSRNADLTPKARDIAAQLRKH-WNTDFD--DAQSIGKR 409

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +  +    P  +           + ++D     +    I   ES+  AR
Sbjct: 410 YRRQEEIGTPYCVTVDFDTLEDHAVTVRDRDTMAQERVSIDQLESYLAAR 459


>gi|146304348|ref|YP_001191664.1| threonyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|172046910|sp|A4YH38|SYT_METS5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145702598|gb|ABP95740.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Metallosphaera
           sedula DSM 5348]
          Length = 541

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 38/114 (33%), Gaps = 3/114 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D   S+ +   V    +      + + L+              V +  +    D+L   +
Sbjct: 394 DEDGSKKRPVMVHRAIYGSLDRMIAILLEHFRGKLPTWLSP--VQVRVLPISEDNLDYAK 451

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +L   GIR E+   S +    ++K       P  +I G  E S   + I+
Sbjct: 452 RVMDVLVQRGIRTEIDP-SGETLSKRIKRGYDDGVPYLVIVGRKEASEEKVTIR 504



 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +++ +R I  + G+  + T  + +   L K     D     +   
Sbjct: 155 GLVLFHPKGQLIRNEMINYMREINASMGYQEVYTSHV-FRTVLWKISGHYDTYRDKMLIF 213

Query: 74  QDDDGQWISLRYDLTA 89
           Q  D   + ++     
Sbjct: 214 Q-KDDDELGIKPMNCP 228


>gi|15920555|ref|NP_376224.1| glycyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|15621338|dbj|BAB65333.1| 571aa long hypothetical glycyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 571

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 9/117 (7%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +    + ++K +    ++R    R +     S + G +   AD    P +I    
Sbjct: 464 VAVFPLLEKEELINKAKEVYNLVRE---RFDTIFDDSGSIGKRYARADEIGVPYSITIDP 520

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
                  + I+D    +++   I +  S  E              + V K++    E
Sbjct: 521 QTLVDNSVTIRDRDTWQQIRVNINDIVSVLERLFKGEEF------NKVGKVINNENE 571


>gi|302879510|ref|YP_003848074.1| prolyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582299|gb|ADL56310.1| prolyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 569

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 9/168 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +L  G        +R   ++   +R    N G   +  P ++ ++ L    
Sbjct: 26  MMRAGYIR-KLASGLYTWMPLGLRALRKVEAIVREEMNNSGAIELLMPAVQPAE-LWDET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +     +  ++D             ++   +AR    ++  +       +       
Sbjct: 84  GRWEVFGPQMLKIKDRHNNQFCFGPTHEEVITDIARREIRSYRQLPVNFYQIQTKFRDEV 143

Query: 118 EK----HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                      F             S E   A M    +     +G+K
Sbjct: 144 RPRFGVMRAREFLMKDAYSFHADFDSLEQTYAVMYQTYSRIFTRLGLK 191


>gi|229829763|ref|ZP_04455832.1| hypothetical protein GCWU000342_01860 [Shuttleworthia satelles DSM
           14600]
 gi|229791752|gb|EEP27866.1| hypothetical protein GCWU000342_01860 [Shuttleworthia satelles DSM
           14600]
          Length = 479

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 4/127 (3%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              I  +  V++  M      L K +   Q L+ AG   ++   S K+ G +   A+ R 
Sbjct: 286 PPRIAPVQIVIVPVMQQKEGVLEKAEELRQQLQKAGFSVKLD-DSEKSPGWKFAEAEMRG 344

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            PL I  G  +  +  + +      K++   ++      E  + Q      ++++  K  
Sbjct: 345 IPLRIEVGPKDIEKEQVVMVRRDNRKKVFVPMRELTERAEQLLEQE---QEDMLARAKDF 401

Query: 489 LQENKEE 495
           L  +  +
Sbjct: 402 LNSHISD 408



 Score = 38.7 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 6/89 (6%)

Query: 2   GKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP 61
            K   ++    +GF         I   I  ++  +++  G + +  PLL     L K   
Sbjct: 27  KKAELMQYSSLKGFMIYKPLGYAIWENIQKNMDAMFKETGVENVYMPLLMPESLLKKEAE 86

Query: 62  DEDRPNKGVFSLQDDDG-----QWISLRY 85
             +     V +     G     + +++R 
Sbjct: 87  HVEGFAPEV-AWVTQGGIQPLQERLAIRP 114


>gi|301626888|ref|XP_002942619.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Xenopus
           (Silurana) tropicalis]
          Length = 683

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/114 (11%), Positives = 37/114 (32%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
              +G    ++A+ +          + P  +  +    +  S      +M+  AG   ++
Sbjct: 551 RAVLGSVERMLAILAENYGGKWPLWLSPFQVMVIPVGPNVESYAYKVQRMIHDAGFMVDL 610

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
                     +++ A        ++ G  E+    + ++     +   RE+K  
Sbjct: 611 DTDHGTTLNKKIRKAQVAQYNFILVVGDKEKQNSTVNVRTRDSKQHGERELKAL 664



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D I++ Y   GF  + TP + Y++ L +     +   K +FS   + 
Sbjct: 353 FLPRGAHIYNVLIDFIKSEYRKRGFTEVITPNM-YNNKLWETSGHWEHYGKNMFSFTVE- 410

Query: 78  GQWISLRYDLTAP 90
            +  SL+      
Sbjct: 411 EETFSLKPMNCPG 423


>gi|167389590|ref|XP_001739012.1| threonyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165897485|gb|EDR24628.1| threonyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 676

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/126 (11%), Positives = 33/126 (26%), Gaps = 3/126 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        +  + L            V++ T+             T+ L  AG  
Sbjct: 551 HRAVLGSIERFTAILTEHLAGKWPFWLSPRQVMVCTVS--EKYNEYGAKITKELNDAGFY 608

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A++    +K    +++ A        ++ G  E     + ++      E   E       
Sbjct: 609 ADLDDSDNK-LPKKIRNAQVAQYNFILVIGEEELVSNSVNVRTRKSKVEGKVEFSEFIKH 667

Query: 467 REARVA 472
            +   A
Sbjct: 668 LKQLEA 673



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 3/108 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++  IR+ Y   G+  + TP + +  +L +           +FS +  +
Sbjct: 304 WLPHGTRIYNKLVQLIRSEYRVLGYQEVITPNI-FLSTLWETSGHWQHYKDDMFSFE-CE 361

Query: 78  GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            Q  +L+          + ++       P R    G + RNE  G   
Sbjct: 362 KQTFALKPMNCPGHCVMFASKKRSYRELPLRYAEFGVLHRNELTGALH 409


>gi|281411969|ref|YP_003346048.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373072|gb|ADA66634.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 640

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + + N ++   R ++   G+  I TPL+   + L K     D   + ++  
Sbjct: 260 GMPFFLPKGVVVLNELMRFSRELHRERGYQEIFTPLIMN-EQLWKISGHWDHYAENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
            + D +  +++      
Sbjct: 318 IEKDEERYAVKPMNCPG 334



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +          +   + +   G R   F    +  G +++ A  +  P  I
Sbjct: 533 WLAPIQVAVIPISEKHNDGAEKIAKRISQEGFRV-FFDNRRETLGYRIRQAQTQKIPYMI 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           I G  E   G + ++          +  + E + E    ++     EL+  
Sbjct: 592 ILGDKELESGKISVR---TRTGKEIKDVDLEHFVETLRNEVLSRKLELLME 639


>gi|227510249|ref|ZP_03940298.1| prolyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189901|gb|EEI69968.1| prolyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 569

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 62/528 (11%), Positives = 131/528 (24%), Gaps = 78/528 (14%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+  +I   +R   E      +  P +  ++ L K     +     
Sbjct: 34  QISAGMYAYLPLAYRVLTKIETIVRQEMEKTSAHEMLMPDVLPAE-LWKESGRYETYGPE 92

Query: 70  VFSLQDDDGQWISLRY--DLT--------------APLARYVAEN----------FDTIV 103
           +F  ++       L    + T               PL  Y  +N               
Sbjct: 93  LFKFKNRHDTDFILGPTHEETFTELIRDSIKSYKQLPLVLYQIQNKYRDEDRPRYGLLRS 152

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA------DTLEA 157
                        NE      +R   +                +    A          A
Sbjct: 153 REFIMKDAYSFAANEADLDDAYRAMEKAYRTIFDRIGLKYRVIIGDGGAMGGSDSKEFSA 212

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
           +     D  +  +       +        D+   E    L+ +   +   +  V   LG 
Sbjct: 213 MAAVGEDTIVYSDESDYFANLEMAKSKATDEPSTEAEADLKKVATPNVKSIDEVADFLGV 272

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
                       A+     + +   +  ++  K  + L          E+    L     
Sbjct: 273 STKKTIKSMLYIADEKPVLVLVRGDY-DVNDVKLKNYLKADFLDLATDEQAVKFLKADFG 331

Query: 278 LVRKSGYNSN-----------------RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
            +   G + +                                     +A+  F V+ E +
Sbjct: 332 SLGPVGVSDDVRILADTRVGNMKNAVVGADEDGYHYVNANLNRDFRIDAVDDFVVVKEGE 391

Query: 321 KPVVFGSVGG-------------GGRYDGLVSRFKGQNVPAT------GFSIGISRLIVA 361
                                  G RY   ++         +       + IGISRL+ A
Sbjct: 392 LSPDGKGKLKFTRGIEIGHIFKLGTRYSKSLNANVLDENGRSIPVIMGSYGIGISRLLSA 451

Query: 362 LKSLESSTNNIKEMGPV-----LITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSK 415
           +    +  N +     V      +  ++   +  ++      + L   GI   +     +
Sbjct: 452 ISEQNADENGLVWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTENGIEVLVDDRKER 511

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             G +   +D    PL I  G      G+++IK    G+ +  +++  
Sbjct: 512 -PGVKFADSDLLGIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEEL 557


>gi|157692336|ref|YP_001486798.1| prolyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|166980100|sp|A8FDC1|SYP_BACP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157681094|gb|ABV62238.1| proline--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 565

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 34/103 (33%), Gaps = 4/103 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++   I   +R   E  G   +  P+L+ ++ + +           +  
Sbjct: 37  SGIYHYLPLAHKVIQHIQSIVRKEMEKAGAAELLMPVLQQAE-MWQESGRWYTYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           ++D  G+  +L     ++   L R   +++  +       +  
Sbjct: 96  MKDRHGREFALGPTHEEVITSLVRSEVKSYKKLPLTLYQIQSK 138


>gi|187929057|ref|YP_001899544.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|238691850|sp|B2UGJ8|SYT_RALPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187725947|gb|ACD27112.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 635

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/258 (11%), Positives = 66/258 (25%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R +Y   G+  ++ P +    +L +     D+  + +F +
Sbjct: 261 GTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQI-LDKTLWEKTGHWDKYRENMF-I 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+            +   +       +         +   G          
Sbjct: 319 TESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRFGEFGACHRNEPSGGLHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     +  +   +      +     D+            IL K+    D ++   
Sbjct: 379 TQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDF--------GFTEILYKLSTRPDKRIGTE 430

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
               RA   L     +G++    E           G  +     D +         +   
Sbjct: 431 ESWDRAEAALA----EGLRASGCEFEYLPGEGAFYGPKIEYVLKDALGRQWQCGTIQVDP 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E +     GE G   
Sbjct: 487 NLPERLDAEFVGEDGARH 504



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          Q   Q L+  G RA + L  ++  G +++    +  P  +
Sbjct: 535 WLSPVQVVVLSITDSHAEYAQSVAQSLQKQGFRAVVDL-RNEKIGYKIREHSVQKVPYQV 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  ER    + ++
Sbjct: 594 VVGDKERDENQVAVR 608


>gi|148269334|ref|YP_001243794.1| threonyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166225512|sp|A5IJ45|SYT_THEP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|147734878|gb|ABQ46218.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermotoga
           petrophila RKU-1]
          Length = 640

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + + N ++   R ++   G+  I TPL+   + L K     D   + ++  
Sbjct: 260 GMPFFLPKGVVVLNELMRFSRELHRERGYQEIFTPLIMN-EQLWKISGHWDHYAENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
            + D +  +++      
Sbjct: 318 IEKDEERYAVKPMNCPG 334



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +          +   + +   G R   F    +  G +++ A  +  P  I
Sbjct: 533 WLAPIQVAVIPISEKHNDGAEKIAKRISQEGFRV-FFDNRRETLGYRIRQAQTQKIPYMI 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           I G  E   G + ++          +  + E + E    ++     EL+  
Sbjct: 592 ILGDKELESGKISVR---TRTGKEIKDVDLEHFVETLRNEVLSRKLELLME 639


>gi|315282166|ref|ZP_07870634.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313614198|gb|EFR87874.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 308

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   D  K A    + I  +V FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANTEMAPV-LYMEKKSHELEKDLEKVATPDQKSIGDIVEFLE 271

Query: 246 IDLEKSMHEL 255
           + +EK+M  +
Sbjct: 272 VPIEKTMKSM 281


>gi|196036918|ref|ZP_03104302.1| prolyl-tRNA synthetase [Bacillus cereus W]
 gi|195990473|gb|EDX54457.1| prolyl-tRNA synthetase [Bacillus cereus W]
          Length = 566

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +   +  K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKELEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ +K +  +
Sbjct: 272 IESDKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|332967802|gb|EGK06905.1| threonine--tRNA ligase [Desmospora sp. 8437]
          Length = 279

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 9/113 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + IRN +    R + +  G+  + TPL+     L +     D   + ++  
Sbjct: 8   GMPFYLPKGMTIRNELESFSRKLQKEAGYQEVRTPLMMN-QRLWEQSGHWDHYRENMY-F 65

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              D    S++             +        R+YR  P+   E     R  
Sbjct: 66  THVDETAFSIKPMNCPG-------HMLVFKHGIRSYRDLPLRLAEFGQVHRHE 111


>gi|295664016|ref|XP_002792560.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226278674|gb|EEH34240.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 559

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/450 (11%), Positives = 125/450 (27%), Gaps = 67/450 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N++   +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 93  GSPLFLPNGTHILNKLTSFLRAQYAQYGFREVLTPSI-YKKSLWEVSGHWQNYKDDMYEV 151

Query: 74  QDDD------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           +                +   L+          + ++N      P R     P+ RNE  
Sbjct: 152 RGRGASGETAEGEIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEIS 211

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           G           +  V    +      C         +G +        +      G  +
Sbjct: 212 GSLS-------GLTRVRRFHQDDGHIFCRPQ-----QIGSEIESALRFTDTVMNTFGFNK 259

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +       + +  +   D  ++     ++        +       G  +  +  D  
Sbjct: 260 YRLVLSTRPERDFIGSIELWDSAERQLRDALEKNGRSWELNEGDGAFYGPKIDMQVQDSD 319

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             F  +   +    L +  +   A  +G  +              +   K    ++    
Sbjct: 320 GKFHQLSTIQLDMNLPQRFELGYAVAEGEED-----------YNPATPGKAMPVLIHRAI 368

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           + +   + A+L                       +    R+     P  G  + +S+   
Sbjct: 369 FGSLERFFALL----------------------IENYNGRWPFWLSPRQGIILTVSQDEK 406

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM---YTQMLRTAGIRAEMFLGSSKNF 417
            +++ E +   I          ++ +S+S ++        Q       R ++   S+++ 
Sbjct: 407 LVQAAEDAATKISGYPVHRNGELNSNSNSTAQPLKPISPAQT----TFRIDVD-TSARSL 461

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           G +++ A +    L  + G      G + I
Sbjct: 462 GKKIREAKKMKYNLIFVLGEKNLGDGSIDI 491


>gi|162289255|ref|YP_522539.2| prolyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|114152240|sp|Q21YZ5|SYP_RHOFD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 580

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 43/115 (37%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++ +L  G        +R+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MTRAGMIK-KLGAGIYSLMPMGLRVVRKVEQIVREEMNRAGAVELVMPVVQPAE-LWQET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +  ++D  G+   ++    ++   +AR   +++  +       +  
Sbjct: 84  GRFESNGPELLRIKDRHGRDFVVQPTSEEVVTDIARQEIKSYKQLPKNLYQIQTK 138


>gi|89344805|gb|ABD69008.1| prolyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 600

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 43/115 (37%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++ +L  G        +R+  ++   +R      G   +  P+++ ++ L +  
Sbjct: 46  MTRAGMIK-KLGAGIYSLMPMGLRVVRKVEQIVREEMNRAGAVELVMPVVQPAE-LWQET 103

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +  ++D  G+   ++    ++   +AR   +++  +       +  
Sbjct: 104 GRFESNGPELLRIKDRHGRDFVVQPTSEEVVTDIARQEIKSYKQLPKNLYQIQTK 158


>gi|229592381|ref|YP_002874500.1| prolyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229364247|emb|CAY51951.1| proline tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 596

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  ++   +R      G   +  P  + ++ L +     +  
Sbjct: 56  MIRKLASGLYTWLPMGLKVMRKVEAIVREEMNAAGSLEVLMPSTQPAE-LWQESGRWEEY 114

Query: 67  NKGVFSLQDDDGQWIS 82
              +   +D  G+   
Sbjct: 115 GPELLRFKDRHGRDFC 130


>gi|3859700|emb|CAA21975.1| mitochondrial threonyl tRNA synthetase [Candida albicans]
          Length = 455

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/461 (10%), Positives = 114/461 (24%), Gaps = 97/461 (21%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++  ++N    YGF  + TPL+ +   L K     D     +F +    
Sbjct: 55  FLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLI-FKTKLWKKSGHWDNYKDDMFKVV--- 110

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G  I+                                          +   I+     + 
Sbjct: 111 GNDIT---------------------------------------KEEYTDNIEEHEYGLK 131

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                +   +      + + + ++ +D+     +R    G L  +        ++  I  
Sbjct: 132 PMNCPSHCMIFAKFDRSYQELPVRYSDFSS--LHRNEASGALSGLTRVRRFHQDDGHIFC 189

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
             +D++D      ++L+          +              +  +LS   E       E
Sbjct: 190 S-MDQIDGEIKNTLELIKDTYNVFGINE--------------IEFYLSTRPEDKFIGEIE 234

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                 +  K                 +         ++    +        I     + 
Sbjct: 235 TWDIAESQLKNVLNSTAGEGNWATREGDGAFYGPKIDVLLKDAFNKKHQVGTIQLDFQLP 294

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
            + +    G  G            +   V    F        + L   +           
Sbjct: 295 NRFELKYVGEDGKRDH--------QPILVHRAVFGSLERFFAILLDHYQGKWPFWINPRQ 346

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAG----------------IRAEMFLGSSKNFGNQL 421
            LI  ++     +   +   + L  +G                   ++     +  G + 
Sbjct: 347 ALIVPIN--ESHVPVAEELQKKL--SGDIVSCDNAIAPLTGFTFHVDID-KRGETVGART 401

Query: 422 KYADRRNCPLAIIQGTGERSRGML--------QIKDLAKGK 454
           K A ++     I+ G  + + G          +IK++   +
Sbjct: 402 KDAIQKGYSYLIMIGDKDIANGTFAVRSRDDRKIKNMTSDE 442


>gi|332968643|gb|EGK07696.1| threonine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 644

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/256 (12%), Positives = 75/256 (29%), Gaps = 4/256 (1%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   A +  E  + +   L +  +    ++   +        G +E   I+E   
Sbjct: 381 DDAHIFCTQAQIQEEVANFIKLTLDVYKDFGFDQIDMKLSTRPEKRVGTDESWDIAEKAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
               +S+ ++       G  Y     +        + +    +              V+ 
Sbjct: 441 AEALDSSGLEWEYLPGEGAFYGPKIEFSLKDSLGRVWQCG-TIQVDPNMPERLDAEFVNE 499

Query: 341 FKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +  P       +G     + +     +      + P  +  M+         Q    
Sbjct: 500 NNERETPIMLHRAILGSFERFLGMLIEHYAGWMPVWLAPQQVVVMNITDKQSEACQNVVA 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L+ AG+RA   L  ++  G +++       P  ++ G  E   G + ++          
Sbjct: 560 ELQNAGLRAISDL-RNEKIGFKIRERTLERIPYMLVLGDKEVESGQVNVRTREGENLGVM 618

Query: 459 EIKNNESWREARVAQI 474
            + +     +  V Q 
Sbjct: 619 SVADFIELVQKAVDQK 634



 Score = 44.4 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R + ++ G+  I+TP +       K        
Sbjct: 255 MQEQSP-GMVFWHPNGWTIYQVLEQYMRKVQKDNGYQEIKTPQIVDRSLWEKS-GHWGNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 ATNMFTTSSES-RDYAVKPMNCPCHVQVFNQGLKSYRELPIRLAEFGSCHRNEPSGSLH 370


>gi|317011967|gb|ADU82575.1| threonyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 612

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQDQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 70/258 (27%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E+   E
Sbjct: 463 NLPERFKLAFTNERNHAE 480


>gi|239817181|ref|YP_002946091.1| prolyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511631|sp|C5CXW9|SYP_VARPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|239803758|gb|ACS20825.1| prolyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 581

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/109 (9%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P+++ ++   +     D+ 
Sbjct: 31  MIKKLGTGIYTYMPMGLRVIRKVEAIVREEMNRAGAVELTMPVVQPAE-FWQETGRFDKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   +   ++    ++   +AR    ++  +       +  
Sbjct: 90  GPELLRIKDRHDRDFVVQPTSEEVVTDIARQEIRSYKQLPKNFYQIQTK 138


>gi|170287992|ref|YP_001738230.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688803|sp|B1L7W6|SYT_THESQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|170175495|gb|ACB08547.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 640

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + + N ++   R ++   G+  I TPL+   + L K     D   + ++  
Sbjct: 260 GMPFFLPKGVVVLNELMKFSRELHRERGYQEIFTPLIMN-EQLWKISGHWDHYAENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
            + D +  +++      
Sbjct: 318 IEKDEERYAVKPMNCPG 334



 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +          +   + +   G R   F    +  G +++ A  +  P  I
Sbjct: 533 WLAPIQVAVIPISEKHNDGAEKIAKRISQEGFRV-FFDNRRETLGYRIRQAQTQKIPYMI 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           I G  E   G + ++          +  + E + E    ++     EL+  
Sbjct: 592 ILGDKELESGKISVR---TRTGKEIKDVDLEHFVETLRNEVLSRKLELLME 639


>gi|146329716|ref|YP_001210021.1| prolyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166980118|sp|A5EXK9|SYP_DICNV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146233186|gb|ABQ14164.1| prolyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 572

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 24/79 (30%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+ N++   IR   +  G   +  P  + ++ L +        
Sbjct: 31  MIRQTAVGIYSWLPLGLRVLNKVSAIIREEMDRAGALEVVMPAAQPAE-LWQESGRWHAY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   +  
Sbjct: 90  GPELQRFIDRHQRDYCIGP 108



 Score = 37.9 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 3/84 (3%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
              D         +   Q    AG+   +    ++  G      D    P  I+      
Sbjct: 481 INADKSEAVRDAAEALYQKFLQAGVDVVLD-DRNRRAGVMFADIDLIGIPARIVISDKTL 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNE 464
           + G ++ K   + ++ +  I   E
Sbjct: 540 ATGSVEFK--RRNEQETFHISLEE 561


>gi|332701961|ref|ZP_08422049.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332552110|gb|EGJ49154.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 655

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  ++               LR  GIRAE  L  ++  G +++ A     P  ++ G  
Sbjct: 539 QVRILNVTDAQAEYTSKVLDALREQGIRAEADL-RNEKLGYKVREAQLEKIPYMLVVGDK 597

Query: 439 ERSRGMLQIKDLAKGK 454
           E   G++ ++    G+
Sbjct: 598 EVETGVVNVRT-RSGE 612


>gi|289642346|ref|ZP_06474494.1| prolyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289507878|gb|EFD28829.1| prolyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 467

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/231 (12%), Positives = 76/231 (32%), Gaps = 23/231 (9%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
            L V  E +         +   +   R          EA++G     +       G    
Sbjct: 176 HLEVYREFMTSVLALPVLVGRKTAKERFAGAINTLTLEAMMGDGKALQMATSHELGQNFA 235

Query: 331 GGRYDGLVSRFKGQNVP-ATGFSIGISRLIVALKSLE----SSTNNIKEMGPVLITTMDH 385
                  +     +++   T +      +   + +                 V++  +  
Sbjct: 236 RAFDIDFLGADGQRHLAWTTSWGSSTRMIGGLIMAHGDDNGLRIPPRLAPVQVIVLPVRD 295

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           D+  L +    T+ L+ AG+R ++      +FG ++  A+ +  P+ +  G  + + G +
Sbjct: 296 DAALLERVSQITEGLQAAGVRVQLDARPGLSFGRRVTDAELKGIPVRVEIGPRDLAAGSI 355

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
            +                   R     +IT+P+ ++++ V  +L + ++ +
Sbjct: 356 TL------------------ARRDTSEKITVPLDDVLARVPALLDDVQQNM 388


>gi|183981901|ref|YP_001850192.1| prolyl-tRNA synthetase ProS [Mycobacterium marinum M]
 gi|183175227|gb|ACC40337.1| prolyl-tRNA synthetase ProS [Mycobacterium marinum M]
          Length = 582

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQL 421
            +L            V +   + D+++ +        L   G+  E+ L   + + G + 
Sbjct: 473 DNLGLRWPAEIAPFGVHLVIANKDAEARAGAIGLASEL--DGLGVEVLLDDRQASPGVKF 530

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           K A+    P  ++ G    + G+++++D   G+     + +
Sbjct: 531 KDAELLGMPWVVVVG-RGWADGVVELRDRFGGQTRELTVGD 570



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 24/75 (32%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+   I   IR      G   I  P L      ++  ++    D    GV
Sbjct: 40  GLYSWLPLGLRVLRNIERVIREEMNAIGGQEILFPALLPRAPYETTNRWTEYGD----GV 95

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G    L  
Sbjct: 96  FRLQDRRGNDYLLGP 110


>gi|164687668|ref|ZP_02211696.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM
           16795]
 gi|164603442|gb|EDQ96907.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM
           16795]
          Length = 639

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +          +     L   G+R E+    ++  G +++ A     P  +
Sbjct: 534 WIAPTQVKILPISDKYNDYAKAVKDALFAKGLRVEID-DRAEKMGFKIREAQLEKVPYML 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           + G  E     + ++   KG+  S  +    +
Sbjct: 593 VVGEKEVEANAVSVRSRDKGEMGSLSVDEFVA 624



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 36/82 (43%), Gaps = 2/82 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K ++++N +L+  R +++   +  IETP++     L +         + ++++
Sbjct: 261 GFPLFMPKGMQLKNALLEFWREVHKEDNYVEIETPIILNRH-LWETSGHWYHYKENMYTV 319

Query: 74  QDDDGQWISLRYDLTAPLARYV 95
           +  D Q  +++         Y 
Sbjct: 320 KI-DDQDFAIKPMNCPGGMLYY 340


>gi|158335473|ref|YP_001516645.1| prolyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189083486|sp|B0C230|SYP_ACAM1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|158305714|gb|ABW27331.1| prolyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 600

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 35/105 (33%), Gaps = 5/105 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         R+  ++   +R   +  G      P ++ ++   +    +        +
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVREEMDAAGAQECLLPQIQPAELWQESGRWDTYTQAEGIM 96

Query: 71  FSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           F+LQD   + + L     ++   +AR +  ++  +       +  
Sbjct: 97  FALQDRQDRELGLGPTHEEVITAVARDMIRSYRQLPLNLYQIQTK 141



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 53/165 (32%), Gaps = 24/165 (14%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES----STNNIKEMGPVLITTMDHD 386
           G  Y     + +   +   G  +         +S +         I     ++I     D
Sbjct: 452 GATYTNEAGKEQPLVMGCYGVGVSRLAQAAVEQSYDKDGIVWPVAIAPYHAIIIIPNGKD 511

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           SD +   +     L  AGI   +   + +  G + K AD    P  I+ G          
Sbjct: 512 SDQVEAAEKLYSELNAAGIETLLDDRTERA-GVKFKDADLIGIPYRIVTG---------- 560

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            + L +G        N E    A      I + +++ T+K+ L +
Sbjct: 561 -RSLKEG--------NVEMVERATHDAHQIALDQVLPTLKEYLAK 596


>gi|146100812|ref|XP_001468953.1| threonyl-tRNA synthetase [Leishmania infantum]
 gi|134073322|emb|CAM72048.1| putative threonyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 788

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 55/460 (11%), Positives = 126/460 (27%), Gaps = 33/460 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N +++ +R  Y   GF  + +P + YS  L       ++    +F  
Sbjct: 307 GSAFWLPHGARIYNTLVEFLRKKYRRCGFQEVISPNM-YSSKLWMVSGHWEKYADNMFCT 365

Query: 74  QDDDGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG------PGRFR 126
           +  + +   L+          + ++       P R    G + RNE  G        R  
Sbjct: 366 K-CEKEDFGLKPMNCPGHCIMFASQPHSYKELPIRYADFGVLHRNELSGALTGLTRVRRF 424

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK------------- 173
           Q     +                 ++D    +G K   YH      K             
Sbjct: 425 QQDDAHIFCRMDQITDEMEGQMQFLSDVYGVLGFKFYFYHSTRPANKLGSEALWDQSESY 484

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +   +    G+  +             D       +   L+    R ++   +    N  
Sbjct: 485 LRTALNRFCGIPEELPDPLHPDQRFHYDGKPDSVKKMKALMKKAERCEDPNAWKGPTNGG 544

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
              I+          +  +     +V+  +        + +   L  + G          
Sbjct: 545 DGWIENAGDGAFYGPKIDI-----VVEDALRRRHQCATIQLDFNLPSRFGLKYTLPAAEK 599

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQK-----PVVFGSVGGGGRYDGLVSRFKGQNVPA 348
                         +  L       +       P  + +       D  +   + + V  
Sbjct: 600 DETTVSPTEKQKHADPALTASSPAVEDCVSKPKPGTYEAAVRDLGIDLELDANQARPVMI 659

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
               +G     +A+       +    + P  +  +   + +    Q     +  AG  A+
Sbjct: 660 HRAILGSLERSIAILCEHFGGDWPFWLSPRQVMVVPVSASNYEYSQQVRDTMHDAGFHAD 719

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +  G++     +++ A++      ++ G  E+    + I+
Sbjct: 720 VDNGAA-TLDKKIRNAEKARYNFILVVGQKEQDATAVNIR 758


>gi|325982725|ref|YP_004295127.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532244|gb|ADZ26965.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 635

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 3/113 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   +  +I   +RNI  + G+  I TP +   D   +     +   + +F 
Sbjct: 260 SGMVFWHPKGWTLWQQIEQYMRNILSHNGYHEIRTPQILDKDLWVRS-GHWENFRENMF- 317

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
           +   D +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 318 ITHSDERDFAIKPMNCPGHVQIFNQGLRSYRELPIRFAEFGSCHRNEASGALH 370



 Score = 44.8 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 1/71 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  ++     +   Q     L+  G+RA + L  ++    +++    +  P  II G  
Sbjct: 540 QVVVLNISRTQIDYAQKVVAQLKENGVRASLDL-RNEKITYKIREHSLQKLPYQIIVGDE 598

Query: 439 ERSRGMLQIKD 449
           E     + +++
Sbjct: 599 EVRANKIAVRN 609


>gi|50121350|ref|YP_050517.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|73919790|sp|Q6D4G8|SYT_ERWCT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49611876|emb|CAG75325.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 642

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/349 (13%), Positives = 96/349 (27%), Gaps = 10/349 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVMWEKTGHWDNYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N I+ +     G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAAALTENNIEFAYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYVGESNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  ++            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIINITDSQSDYVNELTQKLQEAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQITI 476
           ++ G  E   G + +     KDL          K  +  R   + Q+ +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVISKLQQEIRSRSLHQLEV 642



 Score = 41.4 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/205 (6%), Positives = 52/205 (25%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   ++Y +  ++ P       + +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGP-FMMDRVMWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 425 EKRIGSDEMWDRAEADLAAALTENN 449


>gi|327311077|ref|YP_004337974.1| prolyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947556|gb|AEA12662.1| prolyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 491

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 18/119 (15%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V I   +     +       + LR +G+R  +     K  G +  Y + +  PL I  G 
Sbjct: 302 VPIIYGEERKAVMEAASSVAERLRASGVRVHIDDREDKTPGWKFYYWELKGVPLRIEIGK 361

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
            +  +  + +                   R   + + ++ + EL   VKK+L E +E +
Sbjct: 362 RDVEQRSVVL------------------ARRDTLEKYSVGLDELEDAVKKLLGEIEENL 402



 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 4/78 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        ++IR  +   IR ++++ G   +  P+    +   K           V
Sbjct: 42  PVKGAFVWRPYGMKIRRNVEAVIRELHDSTGHQEVLFPVFIPYEFFSKESQHIRGFESEV 101

Query: 71  FSLQDDD---GQWISLRY 85
           F         G+ + LR 
Sbjct: 102 F-WVSKGGEAGERLILRP 118


>gi|329936661|ref|ZP_08286368.1| prolyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329303891|gb|EGG47774.1| prolyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 564

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 2/100 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      +         ++ L  AG+R  +   S  + G +  
Sbjct: 460 DEQGLYWPKEIAPADVHVVAAGK-ALQTELALDVSEKLAAAGVRVLVDERSGVSPGVKFT 518

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            A+    P  ++ G      G++++KD   G+     ++ 
Sbjct: 519 DAELIGVPQILVAGRRSGE-GVVELKDRRTGEREELTVEE 557



 Score = 43.7 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                 ++ + +   +R   +  G   +  P L   E  ++  ++    D     +F L+
Sbjct: 46  WLPLGKKVLDNVSRVVREEMDAIGAQEVLLPALLPKEPYEASARWEEYGD----LLFRLK 101

Query: 75  DDDGQWISLRY 85
           D  G    L  
Sbjct: 102 DRKGGEYLLGP 112


>gi|332672963|gb|AEE69780.1| threonine--tRNA ligase [Helicobacter pylori 83]
          Length = 612

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKHDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVESEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFGFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEHNHAE 480


>gi|312962836|ref|ZP_07777323.1| prolyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282863|gb|EFQ61457.1| prolyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 571

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  ++   +R      G   +  P  + ++ L +     +  
Sbjct: 31  MIRKLASGLYTWLPMGLKVMRKVEAIVREEMNAAGSLEVLMPSTQPAE-LWQESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +   +D  G+   
Sbjct: 90  GPELLRFKDRHGRDFC 105


>gi|83720100|ref|YP_441693.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167618612|ref|ZP_02387243.1| prolyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257137862|ref|ZP_05586124.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|114152178|sp|Q2SZF6|SYP_BURTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|83653925|gb|ABC37988.1| prolyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 578

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138


>gi|325288434|ref|YP_004264615.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324963835|gb|ADY54614.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 636

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 19/144 (13%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     +AL +   +      + PV +  +              + L+   IR E+
Sbjct: 510 RVVYGSIERFIALLTEHYAGAFPVWLAPVQVRILPISDKHSEYAAKVAETLKEMDIRTEI 569

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                +    +++ A     P A++ G  E   G L ++    G++ + ++         
Sbjct: 570 D-ERREKISYKVREAQTEKVPFALVVGDQEAEEGSLAVR--RYGEQNTVKM--------- 617

Query: 470 RVAQITIPISELVSTVKKILQENK 493
                     E ++T+ + +Q  K
Sbjct: 618 -------SREEFLATIIEEIQTKK 634



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 2/91 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN + D  R  +   G+  I+TP++  + +L +     D   + ++  
Sbjct: 261 GFPFFHPKGMVIRNLLEDFWRKEHFKRGYVEIKTPII-LNRALWEQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
              DG   +++                +   
Sbjct: 319 TKIDGVDFAVKPMNCPGGMIMYKTKLRSYRD 349


>gi|317013544|gb|ADU80980.1| threonyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 612

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 84/263 (31%), Gaps = 9/263 (3%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F     + SE +  ++ F    ++         +    A   G +E+   +
Sbjct: 354 EFTQDDAHIFCSFEQIQSE-VSAILDFTHKIMQAFDFSYEMELSTRPAKSIGDDEVWEKA 412

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG--GGRY 334
               K     +RI        G  Y      +       +  K +               
Sbjct: 413 TNALKEALKEHRIDYKIDEGGGAFYGPKIDIKIT---DALKRKWQCGTIQVDMNLPERFK 469

Query: 335 DGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
               +       P       +G     +A+ S     N    + P  I  +  + +    
Sbjct: 470 LAFTNEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVF 529

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + L+   I  E  L  + +   +++ A+++  P+ ++ G  E    +L I+D  K
Sbjct: 530 ALKLKEELKKRDIFVE-ALDKNDSLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDREK 588

Query: 453 GKELSREIKNNESWREARVAQIT 475
             +    +K   +  E+++ +++
Sbjct: 589 QAQYKMPLKEFLNMVESKMQEVS 611



 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 68/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPIWLPKGARLRKRIEDLLSEALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDEVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEHNHAE 480


>gi|261417283|ref|YP_003250966.1| prolyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373739|gb|ACX76484.1| prolyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327884|gb|ADL27085.1| proline--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 564

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 85/254 (33%), Gaps = 11/254 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I++ IR      G   ++ P+++ ++ L           + +   
Sbjct: 38  GIYSMMPIGYRVIQKIVNIIREEMNKIGGIEVDLPVVQTAE-LWSESGRYQAIGEELLRF 96

Query: 74  QDDDGQWISL---RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D +   + L     +    L RYV  ++  +      Y+    +R+E    G   +  +
Sbjct: 97  KDRNNHNMVLAMTHEEAMTDLVRYVLNSYKQLP--VMLYQFKTKYRDEARARGGLIRVRE 154

Query: 131 CDV---DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
             +    +  +S E  D          L        +  +  ++  I+ G  +       
Sbjct: 155 FLMKDAYSFHTSQEDLDRHYQEEYDAYLRIYRRVGIEPVVVQSDTGIMGG--KVAHEFML 212

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D  N    ++       +   +  K      + D +    K A   SE I+ +  FL++ 
Sbjct: 213 DTPNGEDYLILCKKCGYQANREIAKFQRVPFKGDENAALEKVATPNSESIEEITKFLNVP 272

Query: 248 LEKSMHELYELVKG 261
            E +   ++   +G
Sbjct: 273 AESTAKCVFFDFEG 286



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 40/108 (37%), Gaps = 1/108 (0%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                       V I  +  +++ +   + + + L  AGI   +     +  G + K AD
Sbjct: 458 GPIWPKSIAPFQVEIVPIGKEAELMELAEKFEKELEAAGIDVLVDDRDER-PGVKFKDAD 516

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               P+ I  G    + G ++ K   + +    ++++  +  +   A+
Sbjct: 517 LWGSPVRIAIGKKGLANGEVEWKFRNEKQFTMVKVEDVIAKAKEYFAE 564


>gi|6322654|ref|NP_012727.1| Mst1p [Saccharomyces cerevisiae S288c]
 gi|549032|sp|P07236|SYTM_YEAST RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; Flags:
           Precursor
 gi|486345|emb|CAA82038.1| MST1 [Saccharomyces cerevisiae]
 gi|285813075|tpg|DAA08972.1| TPA: Mst1p [Saccharomyces cerevisiae S288c]
          Length = 462

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/446 (11%), Positives = 132/446 (29%), Gaps = 67/446 (15%)

Query: 14  GFADCPTKEIRIRNRILD--SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G         +I N++++   ++  ++ +GF+ + TPL+ Y  +L +     +     +F
Sbjct: 57  GSMFFLPNGAKIFNKLIEFMKLQQKFK-FGFNEVVTPLI-YKKTLWEKSGHWENYADDMF 114

Query: 72  SLQ--DDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  D++ +   L+            +   +    P R     P+ RNE  G       
Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTR 174

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           ++                   + ++   ++ +    Y+      K   G      ++   
Sbjct: 175 LRK----FHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFST 230

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           + +  +  L+             + +L E   ++   +       +     +   ++  L
Sbjct: 231 RPDHFIGDLKV--------WNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVTDHL 282

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            K+       +               + E       + +       ++    + +   + 
Sbjct: 283 RKTHQVATIQLD------------FQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFM 330

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A+L                    GR+   ++ ++   +P    ++    +  AL+    +
Sbjct: 331 ALL---------------IDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRN 375

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                +M PV                     L       ++ + +    G ++K A  +N
Sbjct: 376 ELEADDMEPVP--------------------LNDWHFNVDLDIRNEP-VGYRIKSAILKN 414

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGK 454
               II G  E       I++    K
Sbjct: 415 YSYLIIVGDEEVQLQKYNIRERDNRK 440


>gi|310779473|ref|YP_003967806.1| threonyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748796|gb|ADO83458.1| threonyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 640

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 50/133 (37%), Gaps = 4/133 (3%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            + +   +    +      + + ++    +         V I T++   + +   +    
Sbjct: 502 EKHRPVMIHRVVYGSIERFIGILIEHYAGAFPLWIAPTQVKILTIN--DEVVPYAKEIMA 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            L+   IRAE+    +++ G +++ A+ +   P+ +I G  E +   + ++      + S
Sbjct: 560 KLQEEEIRAEID-SRTESIGYKIREANGKFKVPVQVILGKDEVANREVNVRRFGSKDQES 618

Query: 458 REIKNNESWREAR 470
            ++ +     +  
Sbjct: 619 MKLDDFVKMIKEE 631



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 2/89 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + IRN ++D  R  +   G++ I TP++   + L +         + +++ 
Sbjct: 261 GFPFFMPKGMTIRNILIDLWRKEHTKAGYEQIMTPIMLNKE-LWETSGHWYNYRENMYTS 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTI 102
           +  D    +++            +   + 
Sbjct: 320 EI-DETEFAIKPMNCPGGVLAYKQEMHSY 347


>gi|149927159|ref|ZP_01915416.1| prolyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824098|gb|EDM83319.1| prolyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 586

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/109 (8%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R   ++ + +R      G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIKRLAGGIYTYMPVGLRSIRKVENIVREEMNRAGALELLMPAVQPAE-LWQESGRWEKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   +   +     ++   + R   +++  +       +  
Sbjct: 90  GPELLRMKDRHDRDYVIGPTHEEVITDVVRKEVKSYRQLPLNLYQIQTK 138


>gi|149183492|ref|ZP_01861921.1| prolyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848804|gb|EDL63025.1| prolyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 569

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 45/154 (29%), Gaps = 8/154 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++  ++ + IR    N G   +  P L+ ++ L +           +  
Sbjct: 37  SGIYSFLPLGRKVLQKVEEIIREEMINAGGVELLMPALQQAE-LWQESGRWGTYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRF 125
           L+D   +  +L     ++   L R   +++  +          +R     R        F
Sbjct: 96  LEDRHKRSFALGATHEEVITSLVRDEIKSYKKLPLTLFQIQTKFRDEKRPRFGLLRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                    +   S +    ++    ++     G
Sbjct: 156 IMKDAYSFHSSYESLDDTYEKIFQAYSNVFTRCG 189



 Score = 41.4 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/126 (8%), Positives = 37/126 (29%), Gaps = 20/126 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +++      ++     + +     +     L+       +     +  G +   +D 
Sbjct: 463 QWPSSLTPFDVHIVPINIKNDEQRELAEQLYSELKEQRFDVLLDDRQER-PGVKFTDSDL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  +  G    + G++++K    G                    I +   EL + ++
Sbjct: 522 IGLPFRVTVGKK-AADGVVEVKIRKTGD------------------VIEVHKDELTAKLQ 562

Query: 487 KILQEN 492
           ++ +  
Sbjct: 563 ELFRNQ 568


>gi|15643503|ref|NP_228549.1| threonyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|8928373|sp|Q9WZJ9|SYT_THEMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|4981265|gb|AAD35821.1|AE001744_11 threonyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 640

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + + N ++   R ++   G+  I TPL+   + L K     D   + ++  
Sbjct: 260 GMPFFLPKGVVVLNELMKFSRELHRERGYQEIFTPLIMN-EQLWKISGHWDHYAENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
            + D +  +++      
Sbjct: 318 IEKDEERYAVKPMNCPG 334



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 36/108 (33%), Gaps = 4/108 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +          +   + +   G R   F    +  G +++ A  +  P  I
Sbjct: 533 WLAPIQVAVIPISEKHNDGAEKVARRISQEGFRV-FFDNRRETLGYRIRQAQTQKIPYMI 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           I G  E   G + ++          +  + E + E    ++     EL
Sbjct: 592 IIGDKELESGKISVR---TRTGKEIKDVDPEHFVETLRNEVLSRKLEL 636


>gi|50288841|ref|XP_446850.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526159|emb|CAG59783.1| unnamed protein product [Candida glabrata]
          Length = 1648

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 57/418 (13%), Positives = 129/418 (30%), Gaps = 63/418 (15%)

Query: 24   RIRNRILDSIRNIYENYGFDPIETP--LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
             +R R+ + +  I+  +G      P  +   +   G          + V+ + D  G  +
Sbjct: 1028 ILRARMTEEVVKIFRKHGGVENNGPPRIFPKAPIYG---------TQNVYEVLDLGGTVL 1078

Query: 82   SLRYDLTAPLARYVA--ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS 139
             L+YDLT P+ARY++   +     +  +     P        P RF +     +    S 
Sbjct: 1079 QLQYDLTYPMARYLSKTTSTINKQYRMQYVYRPPENSKSSLEPRRFGEIDFDIISTSSSE 1138

Query: 140  AETADAEMCMMMADTLEAVGIKRNDYHIG-INNRKILDGILEKIGLHGDDKLNERLIVLR 198
            +   DAE   ++ + L    +      +  +N+  ILD +   + +    +     ++ +
Sbjct: 1139 SSFYDAESIKIIDEILTVFPVYEKTNTLFVVNHADILDNVFNFLNIDKAQRPVVSRLLSQ 1198

Query: 199  AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-LSIDLEKSMHELYE 257
                              +   +   +     N+ S  ++ +  F   +D E +   L +
Sbjct: 1199 IG--------------FAKSFREIKAELKSQLNIASTALNDLEMFDFKLDFEGAKKRLQK 1244

Query: 258  LVKGTI---AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
            L+  +      E+  N +  +   ++      N +    +      Y  G ++++I    
Sbjct: 1245 LMIDSPYLRKIEESLNHISKVLNYLKPLEVTRNIVLSPLSNYNSAFYKGGIMFQSIYDDG 1304

Query: 315  VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK----------- 363
                         +  GGRYD L+S F   +   +  +       +A +           
Sbjct: 1305 SSRNL--------IAAGGRYDNLISYFARPSGRKSSTAFRAVGFNLAWETIFGIAQSYFK 1356

Query: 364  -----------SLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEM 409
                             +   +     +      +             L   GI+A+ 
Sbjct: 1357 LASKNRTKKRKEFLKDVSIDWKPSRCDVLVSSFSNSIFDTIGVNILNQLWKNGIKADF 1414


>gi|332521036|ref|ZP_08397494.1| threonyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332043129|gb|EGI79326.1| threonyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 644

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 3/108 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + + L+    +         V I T+          +    +L
Sbjct: 510 HRPVMIHRAPFGSMERFIAILLEHTGGNFPLWLMPNQVSILTLS--EKYEKYGEKVLNLL 567

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               IRA +    S+  G +++ A+    P  II G  E     + ++
Sbjct: 568 ENHEIRALID-NRSETIGKKIREAEMNKTPYMIIIGENEEKENKISVR 614



 Score = 38.3 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 11/82 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS------LGKFLPDEDRPN 67
           G      K   +R R+ + ++   +  G++ + +P +   +         K+  D  +P 
Sbjct: 260 GLPLWLPKGTALRERLENFLKAAQKKAGYEMVMSPHIGQKELYVTSGHYAKYGEDSFQPI 319

Query: 68  KGVFSLQDDDGQWISLRYDLTA 89
           K        D +   L+     
Sbjct: 320 K-----TPKDDEEFLLKPMNCP 336


>gi|319407312|emb|CBI80953.1| Threonyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 654

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/377 (12%), Positives = 106/377 (28%), Gaps = 14/377 (3%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
            +  +                  +           +        S       E       
Sbjct: 266 MIFWHPKGWKMFQNLISYMRRRLDNHKYAEVQAPQVLDKSLWEISGHWGWYKENMFKTIP 325

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD--DKLNERLIVLRAIDKLDKFGLQGV 211
             +    +       +N    +      +  + D   +L E  +V R        GL  V
Sbjct: 326 AADDWNDECTYALKPMNCPGHVQIFKHGLKSYRDLPVRLAEFGLVHRYEPSGSLHGLMRV 385

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           +        D++  F     L  E + I    LS   +    E+   +        G +E
Sbjct: 386 RS----FTQDDAHIFCTEEQLADECLSINDLILSTYADFGFKEISLKLSTRPEKRVGSDE 441

Query: 272 LVVISELVR----KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
           L   +E +     K+    +   +  +I+ G   + G  +E IL   +  E Q       
Sbjct: 442 LWDHAENIMTSVLKTIEEKSSGCVKISILPGEGAFYGPKFEYILTDAIGREWQCGTTQVD 501

Query: 328 VGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
                R+         +            G     + +     + +    + P  I    
Sbjct: 502 FNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHIPFWLAPQQIVVAT 561

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
             SD+    +  T+ L+  G+ A++    ++    +++    +  P+ ++ G  E     
Sbjct: 562 ITSDANEYAKKITEKLKALGLSAKLD-SRNEKINYKIREHSLQKIPVILVCGKQEAQTNS 620

Query: 445 LQIKDLAKGKELSREIK 461
           + ++ L   ++    I+
Sbjct: 621 VNVRRLGSVEQTFLPIE 637


>gi|283769478|ref|ZP_06342374.1| threonine--tRNA ligase [Bulleidia extructa W1219]
 gi|283103746|gb|EFC05132.1| threonine--tRNA ligase [Bulleidia extructa W1219]
          Length = 584

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/400 (10%), Positives = 113/400 (28%), Gaps = 42/400 (10%)

Query: 78  GQWISLRYD--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
            + I+L Y+  LT  +A                                       D   
Sbjct: 223 EKEIALGYEHVLTPSVA-------------STKLYEVSGHLAHYQEDMFPIMERDGDSYV 269

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +          +      +   + ++  +  I  + R    G L  I        N+  I
Sbjct: 270 LRPMNCPEHMIIYKASLHSYRDLPVRIAE--IAHDFRFEASGALTGIERSRSFTQNDSHI 327

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
            LR  D++ +      KL+L         D++   +L                   ++  
Sbjct: 328 FLR-PDQIAEEIKNVTKLILDVYNDFGFKDYSFRLSLRD-----------------LNNT 369

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
            +         +  NEL  + + ++   Y +            ++  +   ++  L    
Sbjct: 370 DKYFGNDDLWTRSENELREVLKEMKVPYYEAEGEAAFYGPKIDVQVKSALGHDVTLSTIQ 429

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
           ++ +                    + +   +           +   L+  +         
Sbjct: 430 LDYQLPERFELEYVNKDN-----QKVRPVVIHRAILGSLDRFVAFLLEETKGVLPLWLAP 484

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
             V +  ++ ++          + L+  GIR+ +    ++  G +++ A     P+ I+ 
Sbjct: 485 LQVEVIPVNSEAHG-DYASKINRALKREGIRSHLD-DRNEKLGYRIREAQMNKVPIQIVV 542

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           G  +     + ++     +E++   K+  +    ++AQ +
Sbjct: 543 GNRDIENETVTVRTYGSKEEVTHSFKDYLNQLVEQIAQKS 582



 Score = 44.1 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 55/218 (25%), Gaps = 13/218 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G          +R  + D I       G++ + TP +  +    +         + +F 
Sbjct: 201 SGLPMWLPNGFTVRRLLSDYIMEKEIALGYEHVLTPSVASTKLY-EVSGHLAHYQEDMFP 259

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           + + DG    LR            E+         +YR  PV   E     RF       
Sbjct: 260 IMERDGDSYVLRPMNCP-------EHMIIYKASLHSYRDLPVRIAEIAHDFRFEASGALT 312

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                 S    D+ + +      E +           N+        +        +   
Sbjct: 313 GIERSRSFTQNDSHIFLRPDQIAEEIKNVTKLILDVYNDFG-----FKDYSFRLSLRDLN 367

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
                   D L       ++ +L E +        + A
Sbjct: 368 NTDKYFGNDDLWTRSENELREVLKEMKVPYYEAEGEAA 405


>gi|194014474|ref|ZP_03053091.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194013500|gb|EDW23065.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 565

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 34/101 (33%), Gaps = 4/101 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++   I   +R   E  G   +  P+L+ ++ + +           +  
Sbjct: 37  SGIYHYLPLAHKVIQHIQSIVRKEMEKAGAAELLMPVLQQAE-MWQESGRWYTYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR 110
           ++D  G+  +L     ++   L R   +++  +       +
Sbjct: 96  MKDRHGREFALGPTHEEVITSLVRSEVKSYKKLPLTLYQIQ 136


>gi|167580503|ref|ZP_02373377.1| prolyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 578

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138


>gi|311279396|ref|YP_003941627.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748591|gb|ADO48343.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 642

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/348 (13%), Positives = 92/348 (26%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSEYVNELTRKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  +  R   + Q+ 
Sbjct: 594 LVCGDKEVETGKVAVRTRRGKDLGSMDVNEVIEKLLQEIRSRSLQQLE 641



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 425 EKRIGSDEMWDRAEADLAVALEENN 449


>gi|296330872|ref|ZP_06873347.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674390|ref|YP_003866062.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151877|gb|EFG92751.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412634|gb|ADM37753.1| prolyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 564

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 60/531 (11%), Positives = 139/531 (26%), Gaps = 76/531 (14%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++   I   +R   E      +  P L+ +++  +           +  
Sbjct: 37  SGVYSYMPLAYKVIQNIQQIVREEMEKIDAVEMLMPALQQAETWQES-GRWYTYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRF 125
           L+D  G+  +L     ++   L R   +++  +          +R     R        F
Sbjct: 96  LKDRHGREFALGATHEEVITSLVRDEVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK--------ILDG 177
                        S +    +M    ++     GI                      L  
Sbjct: 156 IMKDAYSFHATEESLDETYQKMYEAYSNIFARCGINVRPVIADSGAMGGKDTHEFMALSA 215

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL--LGEGRTDNSGDFTKGANLTSE 235
           I E    + D+      I +  +   +    +  K L  +         + T    +++E
Sbjct: 216 IGEDTIAYSDESQYAANIEMAEVLYQEVPSDEEPKALEKVHTPNVKTIEELTAFLQVSAE 275

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN----ELVVISELVRKSGYNSNRIKI 291
                V F + D    +    +     I  +   +    EL    E++++ G     +  
Sbjct: 276 TCIKSVLFKADDRFVLVLVRGDHEVNDIKVKNLLHAEVVELATSEEVIQQLGTEPGFVGP 335

Query: 292 ---SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP- 347
              +  +    +     +  A+ G    +   K V          +  L    +G   P 
Sbjct: 336 VGVNQDVEVYADQAVKAMVNAVAGANEGDHHYKNVNVNRDAQIKEFADLRFIKEGDPSPD 395

Query: 348 -----------------ATGFSIGISRLIVALKSLESSTNNIKEMGPVLI---------- 380
                              G     +     L     +   +     V +          
Sbjct: 396 GKGTIRFAEGIEVGQVFKLGTRYSEAMNATYLDENGRAQPMLMGCYGVGVSRTLSAIAEQ 455

Query: 381 -----------TTMDHDSDSLSKYQM------YTQMLRTAGIRAE----MFLGSSKNFGN 419
                      +   +D   L+            + L  A ++AE    ++   ++  G 
Sbjct: 456 HHDDKGLIWPKSVAPYDLHILALNMKNDSQRELAEKL-YANLKAEGYEVLYDDRAERAGV 514

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           +   +D    P+ I  G      G++++K    G+     +    ++   +
Sbjct: 515 KFADSDLIGLPIRITVGKR-ADEGIVEVKIRQTGESTEVSVDELTAFISKQ 564


>gi|159476198|ref|XP_001696198.1| hypothetical protein CHLREDRAFT_167047 [Chlamydomonas reinhardtii]
 gi|158282423|gb|EDP08175.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 688

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 38/99 (38%), Gaps = 1/99 (1%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
              +G    + A+ +   +      + P  +  +    +S+       + LR+AG+  ++
Sbjct: 541 RAVLGSVERMFAILTEHFAGKWPFWLNPRQVMVVPISENSVEYAFTVRKELRSAGLHCDV 600

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              + +    +++ A        ++ G  E++   + ++
Sbjct: 601 D-STDRKMQKKVREAQLAQYNYILVVGEAEKTAQTVNVR 638



 Score = 37.5 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++  IR  Y  Y ++ + TP +   D L K     D   + +FS  D +
Sbjct: 308 FLPHGARIYNNLVGYIREKYWEYEYEEVITPNIYNFD-LWKTSGHADHYRENMFSF-DIE 365

Query: 78  GQWISLRYDLTAPLARYV 95
            Q   L+       AR +
Sbjct: 366 KQEFGLKPMNCP--ARAL 381


>gi|329904275|ref|ZP_08273747.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548052|gb|EGF32784.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 635

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/153 (7%), Positives = 42/153 (27%), Gaps = 4/153 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   +  ++   +R +Y++ G+  ++ P +   D  L +     +   + +F+
Sbjct: 261 GMIFWHPKGWSVWQQVEQYMRRVYQDNGYQEVKAPQI--LDISLWEKSGHWENYKENMFT 318

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + + +  +L+        +    +  +       Y         +             
Sbjct: 319 -TESEKRSYALKPMNCPGHVQIFRSDMRSYRDLPLRYGEFGQCHRNEPSGSLHGIMRVRG 377

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                      + ++          +     D+
Sbjct: 378 FTQDDGHIFCTEDQILEECVAYTALLHKVYADF 410



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 3/115 (2%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ 420
           +     S      + PV +  ++         +  TQ L+  G R E  L + K  F   
Sbjct: 523 MLLENYSGALPMWLAPVQVVVLNISEGQSDYARSVTQSLKKQGFRVESDLRNEKITFK-- 580

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           ++    +  P  I+ G  ER    + ++        +  I N  +   A VA+ +
Sbjct: 581 IREHSVQKVPYIIVVGDKERDAATVAVRARGNADLGTMPISNLIARLLADVAEKS 635


>gi|297191715|ref|ZP_06909113.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
          25486]
 gi|197721430|gb|EDY65338.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
          25486]
          Length = 408

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G          +R+ + + IR+     G+  + +P+L   +   +        +  +F  
Sbjct: 23 GLPYWLPDGATVRHTLEEYIRSAERRAGYRHVYSPVLGKRELY-EISGHWAHYSDDMFPP 81

Query: 74 QDDDGQWISLRYDLTA 89
           D  G+ + LR  L  
Sbjct: 82 MDLGGEQVVLRPSLCP 97


>gi|169827162|ref|YP_001697320.1| prolyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|226701308|sp|B1HQZ9|SYP_LYSSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|168991650|gb|ACA39190.1| Prolyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 568

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 55/553 (9%), Positives = 136/553 (24%), Gaps = 94/553 (16%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+ ++I   IR   E      +  P L+ ++ L +     ++    +  
Sbjct: 37  SGVYSYLPLAKRVLSKIETIIREEMEAINSIELLMPSLQSAE-LWQESGRWEKYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRF 125
           L+D   +  +L     ++   L R   +++  +          +R     R        F
Sbjct: 96  LKDRHDRDFALGPTHEEVITTLVRDEIKSYKKLPLTLYQIQTKFRDEKRPRFGLLRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG--------INNRKILDG 177
                        S +    +M    ++    +G+                 +   +L  
Sbjct: 156 IMKDAYSFHASRESLDETYDDMYRAYSNIFSRLGLNYRAVIADAGSIGGKGTHEFMVLSE 215

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I E    + D       I +  +    +   + +K +      D        A L  +  
Sbjct: 216 IGEDTIAYSDTSDYAANIEMAEVIADYQTSDEALKEVEKVATPDQKTIEEVSAFLQVKPA 275

Query: 238 DIMVSFL-------------------SIDLEKSMHELYELVKGTIAGEK----------- 267
            ++ S +                    I L+ ++      +    A  +           
Sbjct: 276 HVIKSLVFDVDGELVVVLARGDHEINDIKLKNALEAGSVELASEAAIRELLGCGVGSIGP 335

Query: 268 -------------GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE------ 308
                            +        + G++   +                + E      
Sbjct: 336 VKLPVDVKVVADHAIKSIRNGIAGANEDGFHLVNVNPERDFAVNDYLDIRFIQEGDPSPD 395

Query: 309 --AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
               + F    E       G+          +           G        I+A  +  
Sbjct: 396 GQGTIKFAEGIEVGHIFKLGTTYSAKMNGTFLDEQGKSQPFIMGCYGIGVSRILAAVAEH 455

Query: 367 SSTNNIKEM-------GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
               N              ++     D   ++       +L++      +   + +  G 
Sbjct: 456 FQDENGFTWPTQLAPYDIHVVPVNTKDEVQVALADELYGLLKSYRYDVLLDDRAERA-GV 514

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +   AD    P+ +  G    + G++++K    G+           W             
Sbjct: 515 KFADADLIGLPVRVTVGKK-ATEGIVEVKFRQTGE--------TFEW----------KKE 555

Query: 480 ELVSTVKKILQEN 492
           E++  + +  ++N
Sbjct: 556 EVIDRLNEFFRKN 568


>gi|241663242|ref|YP_002981602.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240865269|gb|ACS62930.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 635

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/258 (11%), Positives = 66/258 (25%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R +Y   G+  ++ P +    +L +     D+  + +F +
Sbjct: 261 GTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQI-LDKTLWEKTGHWDKYRENMF-I 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+            +   +       +         +   G          
Sbjct: 319 TESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRFGEFGACHRNEPSGGLHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     +  +   +      +     D+            IL K+    D ++   
Sbjct: 379 TQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDF--------GFTEILYKLSTRPDKRIGTE 430

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
               RA   L     +G++    E           G  +     D +         +   
Sbjct: 431 ESWDRAEAALA----EGLRASGCEFEYLPGEGAFYGPKIEYVLKDALGRQWQCGTIQVDP 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E +     GE G   
Sbjct: 487 NLPERLDAEFVGEDGARH 504



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          Q   Q L+  G RA + L  ++  G +++    +  P  I
Sbjct: 535 WLSPVQVAVLSITDSHAEYAQSVVQSLQKQGFRAVVDL-RNEKIGYKIREHSVQKVPYQI 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  ER    + ++
Sbjct: 594 VVGDKERDENQVAVR 608


>gi|172012|gb|AAA34808.1| thr-tRNA-synthetase [Saccharomyces cerevisiae]
          Length = 462

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 54/446 (12%), Positives = 135/446 (30%), Gaps = 67/446 (15%)

Query: 14  GFADCPTKEIRIRNRILD--SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G         +I N++++   ++  ++ +GF+ + TPL+ Y  +L +     +     +F
Sbjct: 57  GSMFFLPNGAKIFNKLIEFMKLQQKFK-FGFNEVVTPLI-YKKTLWEKSGHWENYADDMF 114

Query: 72  SLQ--DDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQF 128
            ++  D++ +   L+            +   +    P R     P+ RNE  G       
Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTR 174

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
           ++                   + ++   ++ +    Y+      K   G      ++   
Sbjct: 175 LRK----FHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFST 230

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           + +  +  L+          Q +K +L E       + + GA    +   ++   L    
Sbjct: 231 RPDHFIGDLKVW----NHAEQVLKEILEESGKPWKLNPSDGAFYGPKLDIMVTDHLRKTH 286

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           + +  +L   +                 E       + +       ++    + +   + 
Sbjct: 287 QVATIQLDFQLP----------------ERFDLKFKDQDNSYKRPIMIHRATFGSIERFM 330

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           A+L                    GR+   ++ ++   +P    ++    +  AL+    +
Sbjct: 331 ALL---------------IDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRN 375

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                +M PV                     L       ++ + +    G ++K A  +N
Sbjct: 376 ELEADDMEPVP--------------------LNDWHFNVDLDIRNEP-VGYRIKSAILKN 414

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGK 454
               II G  E       I++    K
Sbjct: 415 YSYLIIVGDEEVQLQKYNIRERDNRK 440


>gi|323450323|gb|EGB06205.1| hypothetical protein AURANDRAFT_29703 [Aureococcus anophagefferens]
          Length = 750

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/388 (9%), Positives = 94/388 (24%), Gaps = 46/388 (11%)

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            +  G     +        +  +  +  +         +  +     L            
Sbjct: 390 WHTSGHALHYKDDMFCFDVEGAEFGMKPMNCPGHCLMFKHDVRSWRDLPMRYADFG---- 445

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
            + +R  L G L  +      + ++  I  R     +    + V+  L E        F 
Sbjct: 446 -VLHRNELSGALSGLTRVRRFQQDDGHIFCR-----EDQVEEEVRGAL-EFMKHVYDVFG 498

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
            G  L           LS   +K++ +     +   A     +            G  + 
Sbjct: 499 MGYRLE----------LSTRPKKALGDKAVWDRAEAALASAMDAFAGKGGWRVNPGDGAF 548

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
                   V              L F +          G   G        +  +   + 
Sbjct: 549 YGPKIDIKVTDALERVHQCATIQLDFQLPIRFDLKYRVGDTSGEEG----GAVTRPIIIH 604

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                     + V  +              V +  +     +    +   + +R A    
Sbjct: 605 RAMLGSVERMMAVLTEHWGGKWPFWISPRQVCVIPVG--PTNFDYARAVRKTIRAARFFV 662

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           ++   S      +++ A        ++ G  E S G + ++                   
Sbjct: 663 DVD-DSGNTLPKKVRNAQLAQYNFILVVGDNEVSDGTVTVR------------------T 703

Query: 468 EARVAQITIPISELVSTVKKILQENKEE 495
            A   + T+P+++ V+  + +     ++
Sbjct: 704 RANTVEGTVPLADFVARCRVLQDTQAKD 731


>gi|308182296|ref|YP_003926423.1| threonyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064481|gb|ADO06373.1| threonyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 612

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         ++L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEVLKKRNIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E     L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRSAEKQKIPMILVLGNEEMETENLSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEYNHAE 480


>gi|237813889|ref|YP_002898340.1| proline--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237505775|gb|ACQ98093.1| proline--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 578

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138


>gi|167825898|ref|ZP_02457369.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226196858|ref|ZP_03792437.1| proline--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254299336|ref|ZP_04966786.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157809003|gb|EDO86173.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|225931118|gb|EEH27126.1| proline--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 578

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138


>gi|158299584|ref|XP_319682.4| AGAP008929-PA [Anopheles gambiae str. PEST]
 gi|157013587|gb|EAA14818.5| AGAP008929-PA [Anopheles gambiae str. PEST]
          Length = 761

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/228 (10%), Positives = 63/228 (27%), Gaps = 25/228 (10%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           EK   E+ V +E  +    + ++         G   + G   +  +   +    Q   + 
Sbjct: 543 EKYLGEIEVWNEAEKALADSLDKFGEPWKENPGDGAFYGPKIDITIMDALKRNHQCATIQ 602

Query: 326 GSV-----GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                         D    + +   +           + +  ++             V++
Sbjct: 603 LDFQLPIRFNLNYIDDSGEKKRPVIIHRAVLGSVERMIAILTENYAGKWPFWLSPRQVMV 662

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +    D  +      Q L  AG   E  L +      +++ A        ++ G  ER
Sbjct: 663 VPVGPAYDDYAD--QVRQRLHEAGFMVEADLDAGDTMNKKIRNAQLAQFNFILVVGEKER 720

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           S   + ++                           + +++LV+ + K+
Sbjct: 721 SSETVNVR------------------TRDNKVHGEVTVNDLVTKLSKL 750



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 2/86 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N ++  IR+ Y   GF  + +P + Y+  L +         + +FS +  +
Sbjct: 385 FQPKGAHIYNTLMGFIRSEYRKRGFQEVISPNI-YNAKLWQTSGHWQHYAENMFSFE-SE 442

Query: 78  GQWISLRYDLTAPLARYVAENFDTIV 103
            +  +L+                +  
Sbjct: 443 KETFALKPMNCPGHCLMFDHRNRSWR 468


>gi|34557905|ref|NP_907720.1| prolyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81832821|sp|Q7M8L1|SYP_WOLSU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|34483623|emb|CAE10620.1| PROLYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 570

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/101 (9%), Positives = 33/101 (32%), Gaps = 4/101 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      R+ ++I   ++   +  G   +    +  ++ L +     ++  K +  
Sbjct: 37  SGIYNFLPLGKRVMDKIRQVVKEEMDQAGAQEVMLGFVTPAE-LWRNSGRFEKYGKELLR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR 110
            +D       L     ++   LA+   +++  +        
Sbjct: 96  FKDRKENDFVLGPTHEEMVVELAKGYVKSYKQLPLHLYQIH 136



 Score = 40.2 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             T +      V++ +   D    +  +     L+  GI   +     + +G+++   + 
Sbjct: 469 IWTKSTAPFNLVIVVSNVKDPSQKAYAENLYNALQKEGIEVLLDDRDER-YGSKMADFEL 527

Query: 427 RNCPLAIIQGTGERSRGMLQI 447
              P A+I G G    G +++
Sbjct: 528 LGIPYAVIVGKG-LIEGQVEL 547


>gi|319944615|ref|ZP_08018883.1| proline--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319742152|gb|EFV94571.1| proline--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 589

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 48/160 (30%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  RI   IR   +  G   +  P+++ ++   +     +  
Sbjct: 31  MIRKLAGGIYTYMPLGLRVIRRIEAIIREEMDAAGAIELLMPVIQPAELWMES-GRWEEY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +  ++D   +   ++    ++   LAR    ++  +       +             
Sbjct: 90  GPELLRIRDRHQRDFVIQPTSEEVVTDLARQDLRSYRQLPKNFYHIQTKFRDERRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        D    SA  +  +M        + +G
Sbjct: 150 MRGREFTMKDAYSFDRDSESALVSYRKMFDAYHRIFDRLG 189


>gi|328885400|emb|CCA58639.1| Prolyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 566

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 52/161 (32%), Gaps = 6/161 (3%)

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGG-RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
               L      E       G       + D L    K   V    + IG+SR + AL   
Sbjct: 400 CGTGLKLDRAIEIGHIFQLGRKYADALKLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQ 459

Query: 366 ---ESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
              E       E+ P  +  +       ++     +  L  AG+R  +   +  + G + 
Sbjct: 460 TADEKGLCWPAEVAPADVHVVAAGKALQTELALEVSDKLSAAGLRVLVDDRAGVSPGVKF 519

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
             A+    P  ++ G      G++++KD   G      ++ 
Sbjct: 520 TDAELMGVPKILVAGRRSGE-GIVELKDRRTGDREELTVEE 559



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ + I   +R   +  G   +  P L   +         D     +F LQD  
Sbjct: 48  WLPLGKKVLSNIERIVREEMDAIGAQEVTLPALLPREPYEA-TGRWDEYGAELFRLQDRK 106

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 107 GGDYLLGP 114


>gi|309782526|ref|ZP_07677250.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308918863|gb|EFP64536.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 580

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/258 (11%), Positives = 66/258 (25%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R +Y   G+  ++ P +    +L +     D+  + +F +
Sbjct: 261 GTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQI-LDKTLWEKTGHWDKYRENMF-I 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+            +   +       +         +   G          
Sbjct: 319 TESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRFGEFGACHRNEPSGGLHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     +  +   +      +     D+            IL K+    D ++   
Sbjct: 379 TQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDF--------GFTEILYKLSTRPDKRIGTE 430

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
               RA   L     +G++    E           G  +     D +         +   
Sbjct: 431 ESWDRAEAALA----EGLRASGCEFEYLPGEGAFYGPKIEYVLKDALGRQWQCGTIQVDP 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E +     GE G   
Sbjct: 487 NLPERLDAEFVGEDGARH 504


>gi|284166054|ref|YP_003404333.1| threonyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284015709|gb|ADB61660.1| threonyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 649

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/343 (11%), Positives = 96/343 (27%), Gaps = 10/343 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           +V  +     +       D +    +  +++ +   N      I +       D      
Sbjct: 305 HVFKTDLWHRSGHYENYQDDMFIFDVGDDEFGLKPMNCPGHAAIFQDQSWSYRDLPIRYA 364

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG--ANLTSEQIDIMVSFLSIDLEKSM 252
              +   K  +  L G+  +      D               E +D++   L     +  
Sbjct: 365 ENGKVYRKEQRGELSGLSRVWAFTIDDGHLFIRPDQIRQEVEEIMDMITDVLETFDLEYE 424

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE-AIL 311
             L    + ++  ++ ++      E V ++  +   ++       G +      +E AI 
Sbjct: 425 MALATRPEKSVGSDEIWDRAEEQLENVLENRAHDYEVEEGDGAFYGPKID--FAFEDAIG 482

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                   Q                     +   +    +       ++ ++  E     
Sbjct: 483 RSWDGPTVQLDFNMPERFDLNYVGEDNEEHRPVMIHRALYGSYERFFMMLIEHYEGRFPL 542

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +  +    D+L               R E+  G       +++ A     P 
Sbjct: 543 WLAPEQVRVLPIS--DDNLGYAHRVANEFDD--FRVEVD-GRDSTLERKIRAAHDDRVPY 597

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            II G  E   G + ++D  + +E   EI++ +   EA + + 
Sbjct: 598 QIIVGDNEEDDGNISVRDRFEDQEYDVEIEDFKQHLEAEIEEQ 640



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/258 (10%), Positives = 66/258 (25%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   + D + ++ ++ G+D +ETP +  +D   +     +     +F  
Sbjct: 270 GLPLYHPPGKTVLKELEDFVEDLNKDAGYDYVETPHVFKTDLWHRS-GHYENYQDDMFIF 328

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D       L+       A         I             R  ++G    ++      
Sbjct: 329 -DVGDDEFGLKPMNCPGHA--------AIFQDQSWSYRDLPIRYAENGKVYRKEQRGELS 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                 A T D     +  D +     +  D    +     L+  +           ++ 
Sbjct: 380 GLSRVWAFTIDDGHLFIRPDQIRQEVEEIMDMITDVLETFDLEYEMALATRPEKSVGSDE 439

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      D+ ++     ++    +   +       G  +     D +         +   
Sbjct: 440 I-----WDRAEEQLENVLENRAHDYEVEEGDGAFYGPKIDFAFEDAIGRSWDGPTVQLDF 494

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E       GE     
Sbjct: 495 NMPERFDLNYVGEDNEEH 512


>gi|52549236|gb|AAU83085.1| glycyl-tRNA synthetase [uncultured archaeon GZfos26E7]
          Length = 593

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 20/114 (17%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V +  +    + ++      + LR  G    +    S   G + +  D    P +I   
Sbjct: 489 QVAVLPLLTREELITPSLAIVKTLRENG--VFVSYDDSGTIGRRYRRNDEIGTPFSITID 546

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                   + I+D                     +AQI +P+ EL  T++ +++
Sbjct: 547 YETLDDDTVTIRDRDS------------------MAQIRVPVGELAETIRAMIR 582



 Score = 43.7 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++ RI D  R +Y    GF  IETP +  +       
Sbjct: 38 GFYDYGPLGAMLKRRIEDIWRKMYVIEEGFYEIETPTIGIAAIFDASG 85


>gi|53720607|ref|YP_109593.1| prolyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76808687|ref|YP_334889.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121599492|ref|YP_991789.1| prolyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124386640|ref|YP_001027282.1| prolyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449387|ref|YP_001082781.1| prolyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126455301|ref|YP_001067757.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134280246|ref|ZP_01766957.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167920563|ref|ZP_02507654.1| prolyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217421246|ref|ZP_03452751.1| proline--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242316379|ref|ZP_04815395.1| proline--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|251766621|ref|ZP_02264460.2| proline--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254178869|ref|ZP_04885523.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254180577|ref|ZP_04887175.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254190985|ref|ZP_04897491.1| prolyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254199071|ref|ZP_04905486.1| prolyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254258028|ref|ZP_04949082.1| proline--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|81824656|sp|Q63QM5|SYP_BURPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152176|sp|Q3JNG4|SYP_BURP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980105|sp|A3MR95|SYP_BURM7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980106|sp|A2S5R3|SYP_BURM9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980107|sp|A1V0N6|SYP_BURMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980108|sp|A3NZI6|SYP_BURP0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|52211021|emb|CAH37009.1| prolyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76578140|gb|ABA47615.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121228302|gb|ABM50820.1| prolyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124294660|gb|ABN03929.1| proline--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126228943|gb|ABN92483.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242257|gb|ABO05350.1| proline--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134248253|gb|EBA48336.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|157938659|gb|EDO94329.1| prolyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160694783|gb|EDP84791.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169656901|gb|EDS88298.1| prolyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|184211116|gb|EDU08159.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|217396658|gb|EEC36675.1| proline--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242139618|gb|EES26020.1| proline--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243065285|gb|EES47471.1| proline--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254216717|gb|EET06101.1| proline--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 578

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138


>gi|312136460|ref|YP_004003797.1| glycyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224179|gb|ADP77035.1| glycyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 591

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 20/114 (17%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           PV +  + +  + ++      + L+  G+        S   G +   AD    P AI   
Sbjct: 480 PVAVFPLLNKKELINLAIKIKKDLQKEGLIV--NYDESGTIGRRYARADEIGIPFAITVD 537

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                 G + I++ +  K++                   I I+++  T+KK+++
Sbjct: 538 HQSIEDGTVTIRNRSDKKQV------------------RIAINKIPDTIKKLIK 573



 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 15/83 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFLPDEDRPN---- 67
            GF D     + ++ +I++  R  Y    GF  +ETP +   + L K     D  N    
Sbjct: 34  SGFYDYGPLGVLLKRKIIEKWREYYTIKEGFYEVETPNVMPKEVL-KASGHVDHFNDPMT 92

Query: 68  -----KGVFS----LQDDDGQWI 81
                  ++     ++D+ G+ +
Sbjct: 93  KCKDCSEIYRADHLIKDETGEDV 115


>gi|71083144|ref|YP_265863.1| threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|123734387|sp|Q4FNH9|SYT_PELUB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71062257|gb|AAZ21260.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 638

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +    +  S  +   + +  AGI +E+ L +  N   +++       PL +
Sbjct: 537 WIAPLQVVVIPISEEFDSYAKEVNEKINNAGISSEVDLKNH-NLNYKIREHSLSKIPLLL 595

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREI 460
           I G  E     + I+ L   K+ + E+
Sbjct: 596 ICGKKEVDSNSVTIRRLDTNKQENMEL 622



 Score = 44.1 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 4/113 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKGVFS 72
           G      K  ++  +++  +R   E  G+  + TP  E  D SL +     ++  + +++
Sbjct: 262 GSVFWHEKGWKLFQKLVAYMRARQEKAGYKEVNTP--EILDRSLWEKSGHWEKYGEHMYT 319

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            Q  D +  +++        +   +   +    P R    G V R E  G   
Sbjct: 320 SQTPDEKIFAIKPMNCPGHVQVFNQGLKSYRDLPLRISEFGKVHRYEPSGALH 372


>gi|156937361|ref|YP_001435157.1| glycyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566345|gb|ABU81750.1| glycyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 580

 Score = 54.8 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 4/102 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +   + K +   ++L  AG R E       + G +    D    P AI      
Sbjct: 474 VLPLLEEKPLVEKAKEVWKLLADAGFRVE--YDEKGSIGRRYARYDEVGVPAAITVDFQT 531

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                + ++D    K++   ++       A +     PI EL
Sbjct: 532 LEDNTVTLRDRDTWKQVRVRVEELPGKLRAFLNGF--PIEEL 571


>gi|116747872|ref|YP_844559.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696936|gb|ABK16124.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 644

 Score = 54.8 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +   +     LR AG+R E+    ++  G +++ A  +  P  +
Sbjct: 535 WLAPVQAIVVTVTDGQIEFARNMYDRLREAGVRVELD-DRNEKLGYKIREAQMQKVPYML 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSR 458
           + G  E + G +  +    G +L  
Sbjct: 594 VIGDREVAAGGVAPR-RRDGTQLEL 617


>gi|325114144|emb|CBZ49702.1| putative histidyl-tRNAsynthetase [Neospora caninum Liverpool]
          Length = 1332

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
             RG  D P    R+   +    R    ++GF    TP++E ++       +
Sbjct: 251 PVRGSQDFPPLLWRLHRWLFSQWRETAASFGFQEFATPVVEPAELYLHPSEE 302



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 7/27 (25%), Positives = 15/27 (55%)

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVA 96
           ++  +D   + ++LR +LT  L R + 
Sbjct: 398 LYLFEDQSRRPLALRPELTPSLCRLLL 424


>gi|307244344|ref|ZP_07526458.1| threonine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492310|gb|EFM64349.1| threonine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 664

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 38/102 (37%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +          +     L  AGIR E+   + K  G +++ A     P  +
Sbjct: 557 WLAPCQVKVLSVSDKYNDFAKELQDKLFDAGIRVELDYRAEK-VGFKIREAQLEKIPYML 615

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E    +L ++   +G+     +++  +    ++A   
Sbjct: 616 VVGEKEMESCLLSVRSRDEGELGQMSVEDFLAKINKQIADRE 657



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     +   ++  ++     ++    +  IETP++  +  L +         + ++++
Sbjct: 284 GFPLFLPRGTALKAALMKYWEEVHREAHYVEIETPII-LNRKLWETSGHWFHYKENMYTV 342

Query: 74  QDDDGQWISLRYDLTAPLARYV 95
           Q  D +  +++         + 
Sbjct: 343 QI-DEEDYAIKPMNCPGAMLFY 363


>gi|78189671|ref|YP_380009.1| threonyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123729828|sp|Q3APV9|SYT_CHLCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78171870|gb|ABB28966.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium
           chlorochromatii CaD3]
          Length = 657

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 19/117 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    ++        + L  AGIRAE+    S+    +++ A+    P  +
Sbjct: 557 WLAPVQVAVLPIAEENHDYATTVYRRLLAAGIRAELD-TRSEKINRKIRDAEMSKTPCML 615

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           + G  E++ G + ++   +G                R A       EL+ T+K+ + 
Sbjct: 616 VIGQKEQANGEVSLRRHRQGD-------------AGRFA-----TDELIETLKQEIA 654



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 4/87 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLP----D 62
           L  E+  G      K   IR+ +   +R      G+ P+ TP +   +   +        
Sbjct: 266 LSPEVGSGLPMWLPKGAIIRSELESFLREEQRKRGYVPVYTPHIGNIELYKRSGHYPYYS 325

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTA 89
           + +     +  +D   +   L+     
Sbjct: 326 DSQFPPLTYHDEDGKQEQYLLKPMNCP 352


>gi|53726087|ref|YP_104063.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|238561266|ref|ZP_00442346.2| proline--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|254202783|ref|ZP_04909146.1| prolyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254208125|ref|ZP_04914475.1| prolyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|81823924|sp|Q62GV8|SYP_BURMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|52429510|gb|AAU50103.1| prolyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|147747030|gb|EDK54107.1| prolyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147752019|gb|EDK59086.1| prolyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|238524974|gb|EEP88404.1| proline--tRNA ligase [Burkholderia mallei GB8 horse 4]
          Length = 578

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138


>gi|86131542|ref|ZP_01050140.1| Threonyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817987|gb|EAQ39155.1| Threonyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 647

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +           I T+          Q   
Sbjct: 509 NEMHRPVMIHRAPFGSMERFVAILLEHTGGNFPLWLMPQQATILTLS--EKYEKYAQNVL 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +L    IRA +     +  G +++ A+ +  P  +I G  E   G + ++
Sbjct: 567 NLLENHEIRALID-NRGETMGKKIREAEMQKLPFMLIIGEQEEKDGTISVR 616


>gi|304313817|ref|YP_003848964.1| threonyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587276|gb|ADL57651.1| threonyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 605

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 43/129 (33%), Gaps = 2/129 (1%)

Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
                 +    I       A++  E        + P  +  +      L   +     + 
Sbjct: 458 HCSPTGSIERVICSLLEKTAIEMDEKPPMLPVWLSPTQVRVLPIAERHLEFAESLVSEMT 517

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              +RA++    ++  G +++ A +   P  ++ G  E   G L +   + G+++  +++
Sbjct: 518 ANDVRADLD-DRAETLGKKIRNAAQDWVPYVVVVGDSELE-GKLTVNIRSTGEKVQMDLQ 575

Query: 462 NNESWREAR 470
                  + 
Sbjct: 576 ELIELVRSE 584


>gi|255531804|ref|YP_003092176.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255344788|gb|ACU04114.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 641

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 44/139 (31%), Gaps = 6/139 (4%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++    +              +          +  +
Sbjct: 509 NQKHRPVMIHRAPFGSLERFIAVLIEHCAGNFPLWLSPEQ--FIILPISEKYEDYAKKVS 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L  + IR  +     K  G +++ A+ +  P  +I G  E + G   ++   K  E  
Sbjct: 567 DELNNSDIRGLIDFRDEK-IGRKIRDAEVKKIPYMLIIGEKEMAEGKASVR---KHGEGD 622

Query: 458 REIKNNESWREARVAQITI 476
                 + + E  + +IT+
Sbjct: 623 LGEMTLQEFSELLIKEITV 641



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 3/78 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R R++  +       G++ + TP + + +         ++  K  F  
Sbjct: 262 GLPLWLPKGAALRERLVQFLTRAQAKAGYEQVVTPHIGHKNLYITS-GHYEKYGKDAFQP 320

Query: 74  QD--DDGQWISLRYDLTA 89
                +G+   L+     
Sbjct: 321 IKTPQEGEEFFLKPMNCP 338


>gi|317499137|ref|ZP_07957414.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893550|gb|EFV15755.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 462

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/228 (7%), Positives = 59/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +            +       + + + +  ++   + ++       +    +        
Sbjct: 237 EWFEYWKNYCINWLQTLGIKEDEMRVRDHEKEELSHYSKATSDIEFMFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +       +       +  +      ++ A   ++         + LE   
Sbjct: 297 RTDYDLTQHQNTSGEDLTYFDDVNKERYIPYVIEPSLGADRVTLAFLCSAYDEEELEGGD 356

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + PV I  +              + L       E       N G + +  
Sbjct: 357 TRTVLHFHPALAPVKIGILPLSKKLSDGAMKVYEEL-AKEYNCEFD--ERGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + ++D    ++   +I+N +++   + A
Sbjct: 414 DEIGTPYCVTFDFDSLEDGAVTVRDRDTMEQERVKIENLKAYFAEKFA 461


>gi|308062983|gb|ADO04870.1| threonyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 612

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRSAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEYNHAE 480


>gi|282858709|ref|ZP_06267863.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282588513|gb|EFB93664.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 649

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +          +   Q L TAG+R
Sbjct: 520 HRAPFGSMERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYAREVMQKLDTAGVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A +    ++  G +++  + +  P  ++ G  E + G++ ++    G++ +  I+     
Sbjct: 578 ALID-DRNEKIGRKIRDNELKRIPYMVVVGEKEAAEGLVAMRKQGGGEQSTMTIQQFIDR 636

Query: 467 REARVAQI 474
             A VA+ 
Sbjct: 637 VNAEVAEQ 644


>gi|114331243|ref|YP_747465.1| prolyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|123026746|sp|Q0AGN2|SYP_NITEC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114308257|gb|ABI59500.1| prolyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 568

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 33/103 (32%), Gaps = 4/103 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +RI ++I   IR    + G   +  P +  ++ L +     D     +  
Sbjct: 37  SGLYTWMPLGLRILHKIEHIIREEMNSSGALELLMPAVHPAE-LWQESGRWDVFGPQMLK 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +QD             ++   +AR   +++  +       +  
Sbjct: 96  IQDRHQHDFCFGPTHEEVIVDIARREIKSYRQLPINFYQIQTK 138


>gi|302348333|ref|YP_003815971.1| Threonyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328745|gb|ADL18940.1| Threonyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 468

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 20/131 (15%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L     +      + P+ +  +      +   +   Q L   G RA +   + K  G ++
Sbjct: 347 LADSGKTPYLPFWLSPLQVAVIPVKDQHVEYARRLLQDLIDVGARAYLDPPT-KGLGARV 405

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE- 480
           + A +   P+  + G  E     + I+                  R     Q  +  +E 
Sbjct: 406 RAAGKAWVPIIAVVGDKEVESNTVNIR------------------RRWLQGQQEVVQAEA 447

Query: 481 LVSTVKKILQE 491
           LV  V ++L  
Sbjct: 448 LVEEVSQLLAS 458


>gi|295677734|ref|YP_003606258.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437577|gb|ADG16747.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 578

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEKYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       L     ++   +AR   +++  +       +  
Sbjct: 97  KDRRQGDFVLGPTHEEVVTDIARNQIKSYRQLPVNFYQIQTK 138


>gi|167740276|ref|ZP_02413050.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 568

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 28  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 86

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 87  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 128


>gi|126440120|ref|YP_001060493.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166980109|sp|A3NDS2|SYP_BURP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126219613|gb|ABN83119.1| proline--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 578

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 138



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 21/86 (24%), Gaps = 3/86 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M +D               L  AGI   +     +  G  
Sbjct: 463 DDKGIVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYAELAAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQ 446
               +    P  ++ G      G ++
Sbjct: 522 FADWELIGVPHRLVIGERGLKDGKIE 547


>gi|269120781|ref|YP_003308958.1| tRNA synthetase class II (G H P and S) [Sebaldella termitidis ATCC
           33386]
 gi|268614659|gb|ACZ09027.1| tRNA synthetase class II (G H P and S) [Sebaldella termitidis ATCC
           33386]
          Length = 375

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 133/391 (34%), Gaps = 51/391 (13%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           ++   +I+  +R  YE YG+  I+    E  D   +    +    + + +     G+  +
Sbjct: 8   LKEEEKIILKLRKHYEQYGYKKIKLSKFESYDLYNENA--DFIKIENIITFMAPTGKLQT 65

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           LR D+T  + +  A                            +++  Q  V+ +G S   
Sbjct: 66  LRPDVTLSIVKKYA---RDKKKEMEKLYYIENIYRLSKEDMEYKELNQIGVEILGESDGY 122

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
           +D E+  + A+++E +     ++ + I+N   L G+ E++                    
Sbjct: 123 SDFEIINLAAESMELINK---NFILDISNINYLSGLFEEM-------------------N 160

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS-MHELYELVKG 261
           L     + V + +      +        N+ S+  +I++    +  +   +    E +  
Sbjct: 161 LGYTLEEEVLMNIQHKNVHDLEKILTKENVESKYKEILIKIPDLSGKFHNVITEAEKLVL 220

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
               +K  +EL ++ +   K    + +I +  +IV  L+YY G ++   +          
Sbjct: 221 NEKMQKALDELKMLGQAFPKM-IKNGKILLDFSIVNSLDYYNGLIFHGYIENNPK----- 274

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                 +  GG YD L+ ++                  + L  L       KE    ++ 
Sbjct: 275 -----IILSGGNYDKLIEKYDKNKGAT--------GFAIYLDELSGKYKIEKEYDFDILI 321

Query: 382 TMDHDSDSLSKYQMYTQMLRTAG--IRAEMF 410
              +  +  +K     +     G  IR E +
Sbjct: 322 LYKNGDN--AKLLNIVKKYIDQGLTIRTEKY 350


>gi|229197929|ref|ZP_04324645.1| Prolyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585647|gb|EEK43749.1| Prolyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 566

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/250 (9%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +   +  K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKELEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ EK +  +
Sbjct: 272 IEAEKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|224584156|ref|YP_002637954.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254783535|sp|C0Q647|SYT_SALPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|224468683|gb|ACN46513.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 642

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSPFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSGYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 632



 Score = 40.6 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSPFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 425 DKRIGSDEMWDRAEADLAVALEENN 449


>gi|302347938|ref|YP_003815576.1| Glycyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328350|gb|ADL18545.1| Glycyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 583

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 31/86 (36%), Gaps = 2/86 (2%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           ++ +    ++ +    +L +AG         S + G +   AD    P A          
Sbjct: 480 IEGEEKLEARARQLRDLLVSAGFTV--LYDDSGSIGKRYARADEIGVPAAFTVDYQTLED 537

Query: 443 GMLQIKDLAKGKELSREIKNNESWRE 468
           G + ++D    +++   +++     +
Sbjct: 538 GTVTLRDRDTWRQVRLRLEDAPEALK 563


>gi|283785057|ref|YP_003364922.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282948511|emb|CBG88100.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 642

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 92/347 (26%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL         I+  +    +R  Q 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNEV-IEKLQQEIRSRSLQQ 639



 Score = 37.1 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 14/205 (6%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 425 EKRIGSDEMWDRAEADLAVALEENN 449


>gi|213969932|ref|ZP_03398065.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301382205|ref|ZP_07230623.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           tomato Max13]
 gi|302061338|ref|ZP_07252879.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           tomato K40]
 gi|302134276|ref|ZP_07260266.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|213925257|gb|EEB58819.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           tomato T1]
          Length = 194

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 8/128 (6%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARY 94
            I+   G +    P L   D+  +     +     +++  D  G+   L  + TA     
Sbjct: 9   AIFIAAGAEEAIVPALWGQDTFIEKAGGSEIIG-QMWAFNDKAGRACCLIPEATA----L 63

Query: 95  VAEN---FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
             E              + +   +R E+   GR+R+F Q  ++ +G S + +      + 
Sbjct: 64  FQERSELLLNGRCEALFFYVARCYRYERPQAGRYREFTQLGLEILGHSPQQSLLRSQAIC 123

Query: 152 ADTLEAVG 159
              L+++G
Sbjct: 124 TGFLDSLG 131


>gi|167895971|ref|ZP_02483373.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 568

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 28  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 86

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 87  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 128


>gi|148284536|ref|YP_001248626.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|146739975|emb|CAM80015.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 433

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 68/242 (28%), Gaps = 12/242 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  +     I++   I D +R          +  P ++ + SL K     +  
Sbjct: 31  MIKQACAGIYNWLPLGIKVLQNIQDIVRKNMNAAQCTELLMPCIQPA-SLWKESSRYNAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +  ++D     +       +L   + R   +++  +       +         R   
Sbjct: 90  GKEMLKIKDRHDNDLLFGPTNEELITDIFRSCIQSYKDLPKNFYHIQWKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR-KILDGI 178
                F        D   +SA  +   M +      + +G+K              L   
Sbjct: 150 MRSREFIMKDAYSFDIDQTSAIQSYNLMYLTYLKIFKDLGLKVIPVQADNGAIGGKLSHE 209

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
              I   GD K+          D      L  ++ L            T    +++++I 
Sbjct: 210 FHIITATGDSKIYYDSTKFNPFDYNQDLSLNKLEQL---YIVTEDKHKTYQNQISNDKIS 266

Query: 239 IM 240
            +
Sbjct: 267 TI 268


>gi|167817496|ref|ZP_02449176.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167847384|ref|ZP_02472892.1| prolyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167904356|ref|ZP_02491561.1| prolyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|167912616|ref|ZP_02499707.1| prolyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 568

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 28  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRF 86

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 87  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 128


>gi|326317187|ref|YP_004234859.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374023|gb|ADX46292.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 639

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 69/258 (26%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R +Y + G+  ++ P +     L +     D+  + +F+ 
Sbjct: 261 GTVFWHPKGWTIWQGVEQYMRQVYRDNGYQEVKGPQILDKH-LWEKTGHWDKYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + +    +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKHDYALKPMNCPG-------HILIFNQGVKSYRDLPLRYGEFGQCHRNEPTGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    D  +        +      +       +    D I +          +E 
Sbjct: 372 IMRVRAFTQDDGHIFCTEDQIQQECINFTSLLQKVYKDFGFTDIIYKVATRPEKRIGSEE 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                + DK +   ++ +K    + +         G  L     D +         +   
Sbjct: 432 -----SWDKAENALIESLKASGCDYQIAVGDGAFYGPKLEYTLRDAIGRHWQCGTIQVDP 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 487 SMPERLGAEYVGEDGQRH 504


>gi|208434081|ref|YP_002265747.1| threonyl-tRNA synthetase [Helicobacter pylori G27]
 gi|238065115|sp|B5Z9Q1|SYT_HELPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|208432010|gb|ACI26881.1| threonyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 612

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   S  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLSMVESKMQEVS 611



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 70/258 (27%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATSALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E+   E
Sbjct: 463 NLPERFKLAFTNERNHAE 480


>gi|167465772|ref|ZP_02330861.1| threonine-tRNA ligase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 419

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 67/258 (25%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I ++ E  G+  + TP+L   D   K     +   + +F  
Sbjct: 34  GLPLWLPNGATIRRTLERYIVDLEEKLGYQHVYTPVLANVDLY-KTSGHWEHYREDMFPP 92

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR             +         +YR  P+   E     R+        
Sbjct: 93  MQLDNEELVLRPMNCP-------HHMMVYKNELHSYRDLPIRIAELGTMHRYEMSGALT- 144

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                 A T +        D ++    +       +     +     ++        ++ 
Sbjct: 145 GLHRVRAMTLNDAHIFCRPDQIKEEFARVITLIRQVYADFGITDYRFRLSYRDPQDTDKY 204

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +   +   + V+ L              G  L  +    +    ++   +   
Sbjct: 205 FPNDEMWEMSQRMLKEVVEELRLPYYEAEGEAAFYGPKLDVQIKTALKKEETLSTAQLDF 264

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  +    GE G   
Sbjct: 265 LLPERFELEYVGEDGQKH 282



 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 2/108 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +   S      +     L+ AGIR    L  ++  G +++ +     P  +
Sbjct: 313 WLCPVQAKILPVSSAFNDYAKEMEDRLKQAGIRVAADL-RNEKLGYKIRESQLEKVPFML 371

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI-PISE 480
           + G  E+  G   ++   +G                 +    + PISE
Sbjct: 372 VVGENEKQSGSFSVRRRGEGDLGVHSADALIQMIREEIDTKKVQPISE 419


>gi|126733661|ref|ZP_01749408.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           CCS2]
 gi|126716527|gb|EBA13391.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           CCS2]
          Length = 359

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 9/168 (5%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
             +R+++   G   ++  +L+ +D+L     ++ R     +   D     + LR D T P
Sbjct: 12  RRLRDLFAAKGAQVVKADVLQPADTLLDLYGEDIRARS--YLTSDPLRGEMVLRPDFTVP 69

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
           +   V  +      P R    G VFR ++    R  +++Q   +                
Sbjct: 70  V---VQMHMQAHADPARYTYAGKVFRKQETDETRANEYVQVGYEVFDGQNPANADAEVFA 126

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
                   G+          +  +L   +  +    D K      + R
Sbjct: 127 AIAE----GLSDLPVRAATGDIGVLMAAVRGLRTTDDRKAALLRHIWR 170


>gi|317179928|dbj|BAJ57714.1| threonyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 612

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVESEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 70/258 (27%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFNYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E+   E
Sbjct: 463 NLPERFKLAFTNERNHAE 480


>gi|134095006|ref|YP_001100081.1| threonyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166223347|sp|A4G619|SYT_HERAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|133738909|emb|CAL61956.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Herminiimonas arsenicoxydans]
          Length = 635

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 43/152 (28%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R +Y++ G+  ++ P +    SL +     +   + +F+ 
Sbjct: 261 GLIFWHPKGWTVWQQVEQYMRRVYQDNGYQEVKAPQI-LDRSLWEKSGHWENYKENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+        +  A +  +       Y         +              
Sbjct: 319 TESENRSYALKPMNCPGHVQIFASDLRSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                     + ++          +     D+
Sbjct: 379 TQDDGHIFCTEDQILDECVAFTALLQKVYRDF 410



 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 17/83 (20%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYAD 425
            + PV I  ++         Q   Q L+  G R  + L + K        +         
Sbjct: 535 WLAPVQIAVLNISDAQADYAQAVAQNLKKQGFRVHVDLRNEKITYKIREHSIQKL----- 589

Query: 426 RRNCPLAIIQGTGERSRGMLQIK 448
               P  I+ G  ER  G + ++
Sbjct: 590 ----PYIIVIGDKERDAGTVAVR 608


>gi|91761979|ref|ZP_01263944.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717781|gb|EAS84431.1| prolyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 444

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 48/159 (30%), Gaps = 6/159 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   +R      G   I  P ++ SD   K     D  
Sbjct: 31  MIKQSSAGIYSWLPLGFKVMKKIEQIVREEQNTIGAQEILMPTIQPSDI-WKESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +  ++D  G+ +       +L   + R   +++ ++      Y I   FR+E     
Sbjct: 90  GDEMLRIKDRQGREMLYGPTNEELVTDIFRSSVKSYKSLPQL--LYHIQWKFRDEVRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
              +  +  + +  S     +             +   +
Sbjct: 148 GIMRGREFYMKDAYSFDVNDEDATFSYNKFFFSYLKTFK 186


>gi|50083997|ref|YP_045507.1| prolyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81827514|sp|Q6FE23|SYP_ACIAD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|49529973|emb|CAG67685.1| prolyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 570

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ N++   +R      G   +  P+ + + SL +      + 
Sbjct: 31  MIRKLASGLYTWLPMGVRVLNKVEAIVREEMNRSGALEVFMPVTQPA-SLWEESGRYVQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D       L     ++   LAR   +++  +          +R     R   
Sbjct: 90  GPELLRFKDRHDNPFVLGPTHEEVITDLARNELKSYKQLPINFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F            +S +     M          +G
Sbjct: 150 MRSREFIMKDAYSFHVDQASLQETYDNMYDTYCRIFTRLG 189


>gi|284054835|ref|ZP_06385045.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 102

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 1/91 (1%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
           M PV++  +    + L   +   +  R+  IRAE      +  G  ++ A++   P+  +
Sbjct: 1   MAPVMVRLLPVSDEFLPFVESVAEKWRSLDIRAEADHSHDR-LGKMIRNAEKAKVPVMAV 59

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            G  E     L I+  A G+  +  +   +S
Sbjct: 60  VGAKEVESNSLSIRTRALGELGTLTVAETQS 90


>gi|223932680|ref|ZP_03624679.1| threonyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223898650|gb|EEF65012.1| threonyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 650

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/380 (9%), Positives = 105/380 (27%), Gaps = 16/380 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +           D+       +  +  +  M       V 
Sbjct: 284 KELASGYQHVYTPPLASVELYKTSGHWDHYHEDMFPTMDMGDGEEFVLRPMNCPHHIQVY 343

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++    +  
Sbjct: 344 KNHVRSYRELPVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKAL 403

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   + ++  ++  E+ +      KG  +  +  +  
Sbjct: 404 QLIIDVY---ADFNLNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMD-EMGVDYF 459

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F        P  FG    G        
Sbjct: 460 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFL------LPERFGLTYIGAD----GE 509

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +     S       + +++ + +         V +  +  ++  L       + 
Sbjct: 510 EHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPTQVTMIPISVEA-HLDYAWKVAKE 568

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L+  G+R  +    ++    +++ +     P  +I G  E     + ++        ++ 
Sbjct: 569 LQDRGVRVHVD-ERNEKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQS 627

Query: 460 IKNNESWREARVAQITIPIS 479
           +        A +A+ + P  
Sbjct: 628 VSEFVDHILADIARKSRPAE 647



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 47/186 (25%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     D  ++ +F  
Sbjct: 262 GLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWDHYHEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA---PL----ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            D   G+   LR         +     R   E    I      +R             R 
Sbjct: 321 MDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPVRIAELGMMHRYEKSGALTGLQRVRE 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +    +   ++ D      +    + +   + +  +   +   + 
Sbjct: 381 MTLNDGHIFVTPEQIQEEFKKALQLIIDVYADFNLNDYRFRLSYRDPEDKEKYYDNDEMW 440

Query: 186 GDDKLN 191
            + +  
Sbjct: 441 ENAQRM 446


>gi|228935133|ref|ZP_04097960.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824498|gb|EEM70303.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 566

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/250 (9%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   +Y   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNYRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +   +  K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKELEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ +K +  +
Sbjct: 272 IEADKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|154482657|ref|ZP_02025105.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC
           27560]
 gi|149736433|gb|EDM52319.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC
           27560]
          Length = 667

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 62/224 (27%), Gaps = 4/224 (1%)

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                EK   E  V +E  +      N + I      G   + G   +         E  
Sbjct: 441 DPENREKYIGEPEVWNETEQDIRNVLNELNIPFVEDIGEAAFYGPKVDINAKNVYGKEDT 500

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGP 377
              +        ++D       G+          SIG     +A    + +      + P
Sbjct: 501 MITIQWDALLAEQFDMYYIDENGEKKRPYIIHRTSIGCYERTLAWLIEKYAGKFPTWLCP 560

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +  +      +         L+  GI   +    S+  G +++ A     P  ++ G 
Sbjct: 561 EQVRVLPISDKYVEYADKVAAELKKNGIDVTVD-SRSEKIGYKIREARLDKLPYMLVVGQ 619

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
            E +   + ++    G E  + +          +    I   E+
Sbjct: 620 QEEADETVSVRSRFAGDEGVKPLDEFIEQICKEIRTKEIRKVEV 663



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 5/116 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K  R+  ++   I ++ +N +G+   +TPL+  SD   K     D    G+F 
Sbjct: 274 GLPLLMPKGQRMIQKLQRWIEDLEDNEWGYVRTKTPLMAKSDLY-KISGHWDHYKDGMFV 332

Query: 73  LQD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           L D   D +  +LR  +T P   YV +                         G   
Sbjct: 333 LGDEEKDKEVFALRP-MTCPFQYYVYKASQKSYRDLPCRYGETSTLFRNEDSGEMH 387


>gi|51102324|gb|AAT95875.1| prolyl-tRNA synthetase [Trichomonas vaginalis]
          Length = 506

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/376 (11%), Positives = 102/376 (27%), Gaps = 39/376 (10%)

Query: 84  RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ--CDVDNVGSSAE 141
           R DLT          F         +    +            + +   C       +  
Sbjct: 37  RADLT----------FHVPKSNFSDWYEELMVTAGIVDKRWDIKGMPIFCSYGYTMHNEI 86

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV--LRA 199
               E+                           + G   +   H D+          + +
Sbjct: 87  MHLFEVAYSKIGVPMTQFPAFIPRSFLEAEADHVKGFQSECFWHEDEMCLRPTSETAMYS 146

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
           +       ++ + +++ +       +      L   ++  +                E  
Sbjct: 147 MFAKWVKTIEDLPVMVQQSCNVYRYETKGTKPLI--RVREI-------------PWNEAH 191

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE-AILGFPVMNE 318
                 ++  + L    ++V      + ++ I    +R  ++      E   +   VM  
Sbjct: 192 TAHATPQEALDILGKFWDIV--HDILTTKLSIDGLRLRRPDWDRFPGAEFTDVLDVVMPC 249

Query: 319 KQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE-----SSTNNI 372
            +     G+   G  +  +            T   +    L   L +            I
Sbjct: 250 GRVLQSVGAHYLGQHFSKVFKIQVDGEFSYMTCIGVSTRCLAAVLSAHGDDKGLIIPTII 309

Query: 373 KEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
             +  V++  +  D+D+L +K     + LR AGIR  +   ++++ G +  Y + +  PL
Sbjct: 310 APIQVVIVPILRKDNDALLAKVAEMKKELRAAGIRVHIDDDTTRSPGEKFYYWEMKGVPL 369

Query: 432 AIIQGTGERSRGMLQI 447
            I  G  +  +    +
Sbjct: 370 RIEVGPRDLEKNECVL 385


>gi|115446545|ref|NP_001047052.1| Os02g0538000 [Oryza sativa Japonica Group]
 gi|50251985|dbj|BAD27919.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|50252661|dbj|BAD28830.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113536583|dbj|BAF08966.1| Os02g0538000 [Oryza sativa Japonica Group]
 gi|215765092|dbj|BAG86789.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623006|gb|EEE57138.1| hypothetical protein OsJ_07040 [Oryza sativa Japonica Group]
          Length = 674

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 2/82 (2%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +    + L         L++ GIRAE+  G        ++ A+ +  PL  + G  E  
Sbjct: 580 ILPVTDNELQYCNEVASELKSKGIRAEVCHGER--LPKLIRNAETKKVPLMAVVGPKEVQ 637

Query: 442 RGMLQIKDLAKGKELSREIKNN 463
              L I+    G+  +  +   
Sbjct: 638 ARTLTIRSRHSGEIGTMPVDEF 659



 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR+ + DS + I+   G+D + TP +  ++ L K     D   + +++ 
Sbjct: 297 GLVFWHPKGAIIRHVLEDSWKQIHLQRGYDLLYTPHVAKAE-LWKVSGHIDFYKENMYNQ 355

Query: 74  QDDDGQWISLRYDLTA 89
            D + +   LR     
Sbjct: 356 MDVEDELYQLRPMNCP 371


>gi|237731269|ref|ZP_04561750.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906808|gb|EEH92726.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 642

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 92/347 (26%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEFQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL         I+  +    +R  Q 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNEV-IEKLQQEIRSRSLQQ 639



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 425 EKRIGSDEMWDRAEADLAVALEENN 449


>gi|89900130|ref|YP_522601.1| threonyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89344867|gb|ABD69070.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodoferax
           ferrireducens T118]
          Length = 669

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 68/258 (26%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  ++ P +    SL +     D+  + +F+ 
Sbjct: 289 GLVFWHPKGWTLWQGVEQYMRQVYRDNGYQEVKGPQI-LDKSLWEKTGHWDKYRENMFT- 346

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 347 TESEKREYALKPMNCPG-------HILIFKQGIKSYRDLPLRYGEFGQCHRNEPSGGLHG 399

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +       L+              +    + I +          ++ 
Sbjct: 400 IMRVRGFTQDDGHIFCTEDQILQECVDYTALLQKVYADFGFENIIYKVATRPEQRIGSD- 458

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  DK +   ++ ++    E           G  +     D +         +   
Sbjct: 459 ----DVWDKAEAALIESLRASGREFEISPGEGAFYGPKIEYTLKDAIGRHWQCGTIQVDF 514

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 515 SMPERLDAEYVGEDGARH 532


>gi|329118120|ref|ZP_08246832.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465780|gb|EGF12053.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 640

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 48/119 (40%), Gaps = 20/119 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+         +   + LR  G R E+ L  ++  G +++   +   P  I
Sbjct: 541 WLAPVQMVVMNITEHQADYCRKVVEKLRAEGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           + G  E+  G + ++         R+ ++  S          + + + ++ +K+ + E+
Sbjct: 600 VVGDKEKENGQVAVR---------RKAEDLGS----------LKVDDFIAQLKREIAES 639



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 35/112 (31%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   I   +R   +  G+  ++TP +    +  +     D     +F +
Sbjct: 267 GMVFWHPRGWALWQAIEQHMRKELDAAGYREVKTPQIMDK-TFWERSGHWDNYKDNMF-V 324

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +    +  +    P R    G   RNE  G   
Sbjct: 325 TQSEKREYAVKPMNCPGHVQIFNNSLRSYRDLPMRLAEFGSCHRNEPSGALH 376


>gi|298373192|ref|ZP_06983182.1| proline--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298276096|gb|EFI17647.1| proline--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 493

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 75/255 (29%), Gaps = 31/255 (12%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L V ++   +         I S   R          EA+
Sbjct: 173 WQEGHTAHATREEAMEEATKMLNVYADFAERYMALPVVKGIKSANERFAGALETFCIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           V++               +RL+ AL      + 
Sbjct: 233 MQDGKALQAGTSHFLGQNFAKAFDVQFVNKDNKLEYVWATSWGVSTRLMGALIMAHSDNN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  +++ L+            LR+ G+  +     +K  G + 
Sbjct: 293 GLVLPPRLAPIQVVIVPIYKNAEQLAAVAERIHPVVDRLRSLGVSVKFDDSDNKKPGWKF 352

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + +  P+ +  G  +   G +++                  +R  ++ + T+P+  +
Sbjct: 353 AEYELKGVPVRLALGGRDLENGTVEV------------------FRRDKLEKQTMPLEGI 394

Query: 482 VSTVKKILQENKEEI 496
              +  +L E ++ I
Sbjct: 395 EQYIVSLLDEIQDNI 409


>gi|257124962|ref|YP_003163076.1| threonyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257048901|gb|ACV38085.1| threonyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 636

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 35/106 (33%), Gaps = 3/106 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + + N++ +  R  ++  G+  I+TP++   + L +         + +++ 
Sbjct: 260 GFPFFMPKGVELFNKLQEIWRVEHKKRGYQEIKTPIMLDKE-LWEISGHWFNYRENMYTS 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              D +  +++            +N                  +  
Sbjct: 319 TI-DEKEYAIKPMNCPGSIIAY-KNNLHSYKDLPLKYGEMGLVHRH 362



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR-RNCPLA 432
            + PV    +    + +   +     L+ AGIR E+     +  G +++ A+  +  P+ 
Sbjct: 533 WLAPVQARILTISDEQVPFAKELFIKLQDAGIRVELD-TRVEKIGYKIREANGVQKIPVQ 591

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +I G  E +   + ++    G + S+ +   +   E    +  +P S
Sbjct: 592 LIIGKNEVANNEVNVRRF--GSQDSKNVS-VDEIIETLKQESHVPFS 635


>gi|164687995|ref|ZP_02212023.1| hypothetical protein CLOBAR_01640 [Clostridium bartlettii DSM
           16795]
 gi|164602408|gb|EDQ95873.1| hypothetical protein CLOBAR_01640 [Clostridium bartlettii DSM
           16795]
          Length = 315

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 68/341 (19%), Positives = 130/341 (38%), Gaps = 41/341 (12%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
            + R  +   I   + + GF  I+  + E  D +     D++   K +  +     + + 
Sbjct: 13  AKKRYELTKKIETSFVDAGFIQIKPEIFEEYDEITAI--DKNISTKSMVKVV--SNKVMV 68

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           LR D+T  L + +           + +    V++N+K+G G  +   Q   + +G  +  
Sbjct: 69  LRPDITISLMKSLIPR-WEDDLNLKLFYHSTVYKNKKNGDGIIQCR-QFGCEYLGEPSID 126

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
           AD E+  +  + L       +++ + I +   +DG +E + +  D +             
Sbjct: 127 ADREVVNLAFNILRKF---TDEFLLEIGSGNYIDGFVESLNIDSDTER------------ 171

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKG 261
                    K LL          F    ++  EQ ++M++ LSI    K + E       
Sbjct: 172 -------EFKKLLYRKNKPELEAFANSLDIKPEQKELMLNILSIRGTLKEVTEKANKYFT 224

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
               +KG  +L  IS L+ K   +   +   S + +   Y             +M +   
Sbjct: 225 NDRMKKGIEQLNTISTLISKEDLDKYTLFDLSMVSKLDYYD-----------GIMLKGYF 273

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
             ++  +  GGRYDGL   F  + VPA GF+I    L+ A+
Sbjct: 274 KNLYKEILSGGRYDGLTESFGRR-VPAIGFTIYFDALMEAI 313


>gi|16764684|ref|NP_460299.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167991842|ref|ZP_02572941.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168244449|ref|ZP_02669381.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194448321|ref|YP_002045340.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197262906|ref|ZP_03162980.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|22654123|sp|Q8ZPS9|SYT_SALTY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690646|sp|B4TGH1|SYT_SALHS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|16419852|gb|AAL20258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|194406625|gb|ACF66844.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197241161|gb|EDY23781.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205329759|gb|EDZ16523.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205336802|gb|EDZ23566.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|261246542|emb|CBG24352.1| ThrRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993213|gb|ACY88098.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157870|emb|CBW17364.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912318|dbj|BAJ36292.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321223961|gb|EFX49024.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323129604|gb|ADX17034.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332988221|gb|AEF07204.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 642

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 632



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 425 DKRIGSDEMWDRAEADLAVALEENN 449


>gi|89075398|ref|ZP_01161815.1| prolyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048814|gb|EAR54384.1| prolyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 571

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 46/171 (26%), Gaps = 12/171 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYAWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTA-----PLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
              +    D   +   L    TA      L R    N                 +     
Sbjct: 90  GPELLRFTDRHARPFVLSP--TAEEVFTSLVR----NEVNSYKQLPLNLYQIQTKFRDER 143

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
             RF      +   + + +   D E      D +     K  D        
Sbjct: 144 RPRFGVMRAREFCMMDAYSFDIDKEGLQKSYDAMHDAYCKAFDRMGLEYRP 194



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 36/112 (32%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+     +     +     L  AGI   +F    +  G  
Sbjct: 461 DENGIIWPDALAPFHVSIVPMNMAKSEEVKEAAEKLYADLTAAGIEV-LFDDRKERPGVM 519

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G      G ++ K+   G + +  + +  ++ + ++A
Sbjct: 520 FADHELLGIPHTIVIGNRSLENGEMEYKNRRTGIKEAVAVNDVVTFLKQKMA 571


>gi|225461914|ref|XP_002265484.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 745

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/138 (9%), Positives = 41/138 (29%), Gaps = 3/138 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +    R +   +             + L+  +            ++  +     S     
Sbjct: 608 EDEAKRERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS--EKSQPYAL 665

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                +  AG   ++   + +    +++ A        ++ G  E +   + ++   KG 
Sbjct: 666 QVRDQIHQAGYYVDVD-TTDRKIQKKVREAQLAQYNFILVVGEEEANTRQVSVRVRDKGD 724

Query: 455 ELSREIKNNESWREARVA 472
                ++N  S+ ++  A
Sbjct: 725 HSVMSMENLLSYFKSETA 742



 Score = 37.9 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N++++ I+  Y   G+  + +P + Y+  L +         + +F  + + 
Sbjct: 375 FLPHGGRIYNKLMEFIKAQYRERGYHEVFSPTM-YNMQLWETSGHAANYKENMFVFEVEK 433

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 434 -QEFGLKPMNCPG 445


>gi|163737417|ref|ZP_02144834.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161388943|gb|EDQ13295.1| prolyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 451

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 54/462 (11%), Positives = 116/462 (25%), Gaps = 67/462 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   +       G  P+  P L+ +D L K     D  
Sbjct: 31  MIKQSAAGIYSWLPLGFKVLKKIETIVHEEQMRAGHIPMLMPTLQSAD-LWKESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  + D  G+ +       +L   + R    ++  +      Y I   FR+E     
Sbjct: 90  GQEMLRISDRHGRDMLYGPTNEELITDIFRSHVGSYKDLP--LTLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +  +                            ++ Y+  +     L      + 
Sbjct: 148 GVMRGREFYM----------------------------KDGYNFDLTKEDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +         G       L    T  S  F   A       D  + +
Sbjct: 180 SYLRSYERMGLQAIPMRADGGPIGGDYTHEFLVLADTGESEVFYDSAVTDLTFGDRAIDY 239

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            S++  + + E  E        ++  +E              +   +    + RG+E   
Sbjct: 240 DSVEQCQGVLE--EFTSKYARTDETHDE-----------ALFNEVPEERRRVARGIEVGQ 286

Query: 304 GCVYEA-ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              +          N +        V                     G S  +  +I A 
Sbjct: 287 IFYFGTKYSEALGANVQGPDGKQSPV--------------HMGSHGIGVSRLLGAIIEAS 332

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY--QMYTQMLRTAGIRAE-MFLGSSKNFGN 419
              +                     D  +    +   + L  AG+  E ++    +  G 
Sbjct: 333 HDDKGIIWPEGVTPFHCGIVNLKQGDDEADAACESLYEALTAAGL--EPLYDDRKERAGG 390

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           +    D    P  I  G      G++++     G+      +
Sbjct: 391 KFATMDLIGLPWRITVGPRGLKNGVVELTSRRSGESEELSPE 432


>gi|161614260|ref|YP_001588225.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|194446059|ref|YP_002040590.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|198243456|ref|YP_002215793.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|207857160|ref|YP_002243811.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|189083620|sp|A9N243|SYT_SALPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690315|sp|B5FJA8|SYT_SALDC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690400|sp|B5QVW8|SYT_SALEP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238693615|sp|B4T4M8|SYT_SALNS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161363624|gb|ABX67392.1| hypothetical protein SPAB_02005 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404722|gb|ACF64944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|197937972|gb|ACH75305.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|206708963|emb|CAR33293.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 642

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 632



 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 425 DKRIGSDEMWDRAEADLAVALEENN 449


>gi|315498771|ref|YP_004087575.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315416783|gb|ADU13424.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 640

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 1/80 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG          +   +   +R   +  G+  ++TP +    +  +     D+    +F 
Sbjct: 262 RGMVFWHPHGWTLWRTLEAYMRRRLDAAGYVEVKTPQV-LDRTFWEKSGHWDKYRPNMFV 320

Query: 73  LQDDDGQWISLRYDLTAPLA 92
            +  +G+ +SL+        
Sbjct: 321 CETVEGETLSLKPMNCPGHV 340



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/253 (11%), Positives = 74/253 (29%), Gaps = 6/253 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F +   +  E    +     +  +  M   +  +        G +E    +E   
Sbjct: 384 DDAHIFCREDQIVEETTKFITLCRQVHADLGMQAEHIALATRPEVRAGSDEFWDKAEAQM 443

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                +  ++       G  Y     +   +AI         Q   V     G       
Sbjct: 444 AEAARAAGVEPVIAEGDGAFYAPKLDFIVRDAIGRTWTCGTIQLDYVLPERLGAEYVAED 503

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR +   +           + + +++             V++  +  D++     Q   
Sbjct: 504 GSRQRPVMLHRAILGSFERFIGIIIENYGGKFPLWLAPIQVVVAPITSDAN--DYAQQVA 561

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             LR+ G+R +  L  ++    +++       P+  + G  E   G + ++ L +  +  
Sbjct: 562 SKLRSVGLRVDTDL-RNEKINYKIREHSLAKVPVIAVVGRKEAETGEVALRYLGQEGQTV 620

Query: 458 REIKNNESWREAR 470
             + +        
Sbjct: 621 LSVDSAAEQLRTE 633


>gi|227501051|ref|ZP_03931100.1| threonine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216824|gb|EEI82222.1| threonine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 667

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + + N +L    ++  N G+  I+TPL+  +++L       D   + ++  
Sbjct: 289 GFPFFHPNGMILMNELLVWWTDVLNNNGYGEIKTPLI-LNEALWHRSGHWDHYKENMY-F 346

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              DG+  +++           A N  +    P R    G V R+E  G   
Sbjct: 347 TKIDGEAYAVKPMNCPGSVLTYAANQHSYRDLPIRLAEYGQVHRHELSGTLH 398



 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 33/99 (33%), Gaps = 1/99 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +      +   +   + ++ AG R  +   S    G +++ A        ++ G  
Sbjct: 567 QVEIIPVSDKYIPYAEELKEKIKKAGYRVNIDYRSEG-VGYKIRQAQLMRTNYMLVVGEK 625

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           E + G L +++    +     ++          A  +I 
Sbjct: 626 EENSGKLTVRNRDAKETPDVSLEEFIEKLNEEKASKSIK 664


>gi|16760562|ref|NP_456179.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141677|ref|NP_805019.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|167552305|ref|ZP_02346058.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168239001|ref|ZP_02664059.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168821978|ref|ZP_02833978.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194736705|ref|YP_002114350.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251550|ref|YP_002146704.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|200390235|ref|ZP_03216846.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204927743|ref|ZP_03218944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|213423451|ref|ZP_03356434.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
 gi|213426331|ref|ZP_03359081.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213852224|ref|ZP_03381756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|238910851|ref|ZP_04654688.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|22654121|sp|Q8Z6I2|SYT_SALTI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690055|sp|B5F7G2|SYT_SALA4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238693694|sp|B4TUF0|SYT_SALSV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|25292951|pir||AC0706 threonine-tRNA ligase (EC 6.1.1.3) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502858|emb|CAD02020.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137305|gb|AAO68868.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|194712207|gb|ACF91428.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197215253|gb|ACH52650.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197288252|gb|EDY27637.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|199602680|gb|EDZ01226.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204323085|gb|EDZ08281.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205323017|gb|EDZ10856.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205341550|gb|EDZ28314.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320086187|emb|CBY95961.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322620023|gb|EFY16896.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622333|gb|EFY19178.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627857|gb|EFY24647.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633045|gb|EFY29788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636709|gb|EFY33412.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641265|gb|EFY37906.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645254|gb|EFY41783.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650195|gb|EFY46609.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655769|gb|EFY52071.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660095|gb|EFY56334.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665338|gb|EFY61526.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669596|gb|EFY65744.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673522|gb|EFY69624.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322677448|gb|EFY73512.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322679887|gb|EFY75926.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687359|gb|EFY83331.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323192477|gb|EFZ77707.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198668|gb|EFZ83769.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204096|gb|EFZ89110.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208715|gb|EFZ93653.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210228|gb|EFZ95127.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217691|gb|EGA02406.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220245|gb|EGA04700.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323223489|gb|EGA07815.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229493|gb|EGA13616.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323232716|gb|EGA16812.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240245|gb|EGA24289.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242767|gb|EGA26788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249083|gb|EGA33002.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323254416|gb|EGA38233.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255600|gb|EGA39356.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260123|gb|EGA43748.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267113|gb|EGA50598.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323271563|gb|EGA54984.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 642

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 632



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 425 DKRIGSDEMWDRAEADLAVALEENN 449


>gi|222151464|ref|YP_002560620.1| glycyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254781879|sp|B9E6V6|SYG_MACCJ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|222120589|dbj|BAH17924.1| glycyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 462

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/231 (6%), Positives = 51/231 (22%), Gaps = 9/231 (3%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                +    +  + +       K  +                   K            +
Sbjct: 238 WQEYWKNFAAKWLKDLGIKEENTKLRDHDEDELSHYSN-ATTDIEYKFPFGWGELWGIAS 296

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              ++         +        +     +Y              T   +  +     L+
Sbjct: 297 RTDFDLKAHMAASGDDFSYHDQET---NEKYVPYCIEPSLGADRVTLAFLCDAYEEETLE 353

Query: 364 --SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +       + P     +              + L +A     +    S++ G + 
Sbjct: 354 GGDSRTVMRFHPALAPYKAAILPLSKKLSPDAMKVYEAL-SADFA--IDFDESQSIGKRY 410

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  D    P  I           + ++D    +++   I   +++ + ++ 
Sbjct: 411 RRQDEIGTPFCITFDFDSLEDNQVTVRDRDTMEQVRMPISEVKAFLDEKIK 461


>gi|168233251|ref|ZP_02658309.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194472380|ref|ZP_03078364.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194458744|gb|EDX47583.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205332671|gb|EDZ19435.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 642

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 632



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 425 DKRIGSDEMWDRAEADLAVALEENN 449


>gi|120611523|ref|YP_971201.1| threonyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166223312|sp|A1TR39|SYT_ACIAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120589987|gb|ABM33427.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidovorax
           citrulli AAC00-1]
          Length = 639

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 68/258 (26%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R +Y + G+  ++ P +     L +     D+  + +F+ 
Sbjct: 261 GTVFWHPKGWTIWQGVEQYMRQVYRDNGYQEVKGPQILDKH-LWEKTGHWDKYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + +    +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKHDYALKPMNCPG-------HILIFNQGVKSYRDLPLRYGEFGQCHRNEPTGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    D  +        +              +    D I +          +E 
Sbjct: 372 IMRVRAFTQDDGHIFCTEDQIQQECINFTALLQKVYKDFGFTDIIYKVATRPEKRIGSEE 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                + DK +   ++ +K    + +         G  L     D +         +   
Sbjct: 432 -----SWDKAENALIESLKASGCDYQIAVGDGAFYGPKLEYTLRDAIGRHWQCGTIQVDP 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 487 SMPERLGAEYVGEDGQRH 504


>gi|325915741|ref|ZP_08178043.1| prolyl-tRNA synthetase, family II [Xanthomonas vesicatoria ATCC
           35937]
 gi|325538005|gb|EGD09699.1| prolyl-tRNA synthetase, family II [Xanthomonas vesicatoria ATCC
           35937]
          Length = 564

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 32/109 (29%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  + D   Q         +  A  AR    ++  +       +  
Sbjct: 90  GGQLLKISDRKQQEFCYSPTAEEAAADFARQEINSYKQLPLNFYQIQTK 138


>gi|310658431|ref|YP_003936152.1| threonyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308825209|emb|CBH21247.1| threonyl-tRNA synthetase [Clostridium sticklandii]
          Length = 637

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      +   +   + +  A IR E+    ++  G +++ A     P  I
Sbjct: 534 WIAPVQVKILPISDKFMDYAKQIEKAMYDAKIRVELD-DRAEKIGYKIREAQLEKVPYMI 592

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           I G  E + G + ++    G 
Sbjct: 593 IVGEKELNEGNISVRSRDLGD 613



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 74/258 (28%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K   ++N++L+  R ++   G+  IETP++  +  L +         + ++++
Sbjct: 261 GFPFFLPKGTVLKNKLLEYWREVHREDGYVEIETPII-LNRQLWETSGHWFNYKENMYTV 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +  D +  +++                 +             R  + G          ++
Sbjct: 320 EI-DEEDFAIKPMNCPG--------GMLVYQTKMRSYKDFPIRMGEIGRVHRH-----EL 365

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                      A         +    IK     +     KI         L    +  + 
Sbjct: 366 SGALHGLMRVRAFTQDDAHIFMLPEQIKDEIKGVVSLIDKIYKTFGFSYHLELSTRPEKF 425

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L  +   D+ +      ++ L      +       G  +     D +         +  +
Sbjct: 426 LGEISMWDEAESNLKAALEELGLPYIINEGDGAFYGPKIDFHLRDCIGRTWQCGTIQLDY 485

Query: 254 ELYELVKGTIAGEKGFNE 271
           +L E  + +  G+ G   
Sbjct: 486 QLPERFELSYIGKDGEKH 503


>gi|157370384|ref|YP_001478373.1| threonyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166987325|sp|A8GDQ5|SYT_SERP5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157322148|gb|ABV41245.1| threonyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 642

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 95/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMG 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + +E  + +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQVRAEVNECIRMVYDVYGTFGFDK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +++   +E    +    N I        G  Y     +       
Sbjct: 416 IAVKLSTRPEKRIGTDDMWTRAEEDLAAALTENGIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQ--KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              +    +   F     G  Y G  +      +        + R I  L    +     
Sbjct: 476 RAWQCGTVQLDFFLPGRLGASYVGENNDRVVPVMIHRAILGSMERFIGILTEEYAGFYP- 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWIAPVQVVVMNITDSQSDYVQQLTKKLQDAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  +  R   + Q+ 
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSLDVNEVVDKLLKEIRSRSLHQLE 641



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/203 (7%), Positives = 51/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   + + +  V      +          D I  K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRAEVNECIRMVYDVYGTF--------GFDKIAVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA + L     +
Sbjct: 425 EKRIGTDDMWTRAEEDLAAALTE 447


>gi|62179922|ref|YP_216339.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|168263848|ref|ZP_02685821.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168463268|ref|ZP_02697199.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|73919823|sp|Q57PV3|SYT_SALCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|62127555|gb|AAX65258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|195634423|gb|EDX52775.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|205347615|gb|EDZ34246.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|322714388|gb|EFZ05959.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 642

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 632



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 425 DKRIGSDEMWDRAEADLAVALEENN 449


>gi|332678497|gb|AEE87626.1| Threonyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 634

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 54/449 (12%), Positives = 114/449 (25%), Gaps = 91/449 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI  ++ D +R     YG   I TPL+       K        +K     
Sbjct: 260 GIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSG----HASK----- 310

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                 AEN                 ++E              V
Sbjct: 311 ---------------------YAENM-------------FATKSENRDFAIRPMNCPTCV 336

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       M    +          H  +  R                +    
Sbjct: 337 QVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVI 396

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG     + +     +  GD                       +++  
Sbjct: 397 LMVQQCFEVYKDFGFNDFAVKIALRPENRIGD-----------------------DETWD 433

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL+                 +   I R  +  T  +       
Sbjct: 434 KSEQMLKNALDANNVSYELLPGEG---AFYGPKIEFHLKDAIGRSWQCGTIQL------- 483

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D    +     +           + + ++    +     
Sbjct: 484 --------DFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLW- 534

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M   ++     +    ML   GIRA++ L  ++  G +++       P  +
Sbjct: 535 -LAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDL-RNEKIGFKIREHTLLRVPYLV 592

Query: 434 IQGTGERSRGMLQIKDLAKGK---ELSRE 459
           I G  E+ + ++ I+    G+   ++S +
Sbjct: 593 ILGKNEQEQKIITIRK-HSGEDLGQMSVD 620


>gi|228921082|ref|ZP_04084417.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838628|gb|EEM83934.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 640

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +   +R I + Y +  + TP +   +   +           ++  
Sbjct: 265 GMPFYLPKGQMIRNELEAFLREIQKEYKYQEVRTPFMMNQEVWERS-GHWGHYKDNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + D +  +L+             +         +YR  P+   E     R   
Sbjct: 323 SEVDNKSFALKPMNCPG-------HMLMFKNKLHSYRELPIRMCEFGQVHRHEF 369



 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 66/232 (28%), Gaps = 7/232 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I  +++ +    +    E    +        G ++L   +E   ++   S   K  
Sbjct: 396 IEDEIKSVMAQIDYVYKTFGFEYEVELSTRPEDSMGDDKLWEQAEAALENVLQSLNYKYR 455

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +         ++                   D    + +   +   
Sbjct: 456 LNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDENNEKKRPVVIHRA 515

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   L + ++    +         V +  +  ++            L  AGIR E 
Sbjct: 516 VLGSLDRFLAILIEHFGGAFPAWVAPVQVKVIPVS-NAVHEQYASEVAHKLAQAGIRVEQ 574

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                +  G +++    +  P  ++ G  E  +G + ++    G+E S  + 
Sbjct: 575 D-ARDEKLGYKIREVQMQKVPYVLVIGDKEMEKGAVNVR--KYGEEKSEVVA 623


>gi|218190922|gb|EEC73349.1| hypothetical protein OsI_07557 [Oryza sativa Indica Group]
          Length = 674

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 2/82 (2%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +    + L         L++ GIRAE+  G        ++ A+ +  PL  + G  E  
Sbjct: 580 ILPVTDNELQYCNEVASELKSKGIRAEVCHGER--LPKLIRNAETKKVPLMAVVGPKEVQ 637

Query: 442 RGMLQIKDLAKGKELSREIKNN 463
              L I+    G+  +  +   
Sbjct: 638 ARTLTIRSRHSGEIGTMPVDEF 659



 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR+ + DS + I+   G+D + TP +  ++ L K     D   + +++ 
Sbjct: 297 GLVFWHPKGAIIRHVLEDSWKQIHLQRGYDLLYTPHVAKAE-LWKVSGHIDFYKENMYNQ 355

Query: 74  QDDDGQWISLRYDLTA 89
            D + +   LR     
Sbjct: 356 MDVEDELYQLRPMNCP 371


>gi|189189606|ref|XP_001931142.1| prolyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187972748|gb|EDU40247.1| prolyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 488

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 61/487 (12%), Positives = 140/487 (28%), Gaps = 42/487 (8%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           +R++N++   I     + G   +    +  +++L +        N  +  ++D       
Sbjct: 7   LRVQNKLEGLIDKHMNSIGASKVSLSSI-TTEALWRQSGRYS-ANSELLRIKDRRETGFL 64

Query: 83  LRY----DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
           L      ++TA +A  V    D  +   +  R     R  + G  R ++F+  D+    S
Sbjct: 65  LSPTHEEEITALVASMVHSYKDLPLRLYQIGRKYRDERRPRGGLLRAKEFMMKDLYTFDS 124

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
           S + A      +           +  Y +   +   + G L         K  + +   +
Sbjct: 125 SPKAALETYESVRDAYNNLFNELKLPYLVADADSGNMGGKLSHEYHFASPKGEDYIFSCQ 184

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL----SIDLEKSMHE 254
           + + +     + +           + D      ++ ++   +   +     + ++K   +
Sbjct: 185 SCEYVVN---EELVEKNTGPAAPKTSDSLIFTGISVDKKTAINIHIPKPYGLGVDKVSWD 241

Query: 255 LYELVKGTIAGEKG-FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                    A +K    ++ + + +   +  +       +  V            +I   
Sbjct: 242 GVSAFVNLHAVKKALPKDIEIDTGIETLTLRSLLSTTTETIDVYDPAIANAPSTCSIDIT 301

Query: 314 PVMNEKQKPVVFGSVGG-------------GGRY-----------DGLVSRFKGQNVPAT 349
                   P                     G RY           D  +S          
Sbjct: 302 LTKPGDPCPRCATGKLNIQKAIEVGHTFHLGTRYSVPLNAVIALRDQNLSSPVHMGCHGI 361

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD---HDSDSLSKYQMYTQMLRTAGIR 406
           G S  I  +   L                 I   D    + D+   Y       R   I 
Sbjct: 362 GVSRIIGAVASLLSDARGLNWPRVIAPYEAIVLSDPKTEEEDTTEVYDALRGEERNPDID 421

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +   + K+ G +LK AD    P+ ++ G        ++I+    G +   ++K   + 
Sbjct: 422 LVLDDRAGKSLGWKLKDADLIGYPVVVVLGRS-WKDKKVEIQCRRLGVKKDVDLKELRTE 480

Query: 467 REARVAQ 473
             A + Q
Sbjct: 481 ALALLEQ 487


>gi|118497781|ref|YP_898831.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194323753|ref|ZP_03057529.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|208779844|ref|ZP_03247188.1| threonyl-tRNA synthetase [Francisella novicida FTG]
 gi|166223342|sp|A0Q762|SYT_FRATN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118423687|gb|ABK90077.1| threonyl-tRNA synthetase [Francisella novicida U112]
 gi|194322117|gb|EDX19599.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|208744299|gb|EDZ90599.1| threonyl-tRNA synthetase [Francisella novicida FTG]
          Length = 634

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 54/449 (12%), Positives = 114/449 (25%), Gaps = 91/449 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI  ++ D +R     YG   I TPL+       K        +K     
Sbjct: 260 GIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSG----HASK----- 310

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                 AEN                 ++E              V
Sbjct: 311 ---------------------YAENM-------------FATKSENRDFAIRPMNCPTCV 336

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       M    +          H  +  R                +    
Sbjct: 337 QVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVI 396

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG     + +     +  GD                       +++  
Sbjct: 397 LMVQQCFEVYKDFGFNDFAVKIALRPENRIGD-----------------------DETWD 433

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL+                 +   I R  +  T  +       
Sbjct: 434 KSEQMLKNALDANNVSYELLPGEG---AFYGPKIEFHLKDAIGRSWQCGTIQL------- 483

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D    +     +           + + ++    +     
Sbjct: 484 --------DFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLW- 534

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M   ++     +    ML   GIRA++ L  ++  G +++       P  +
Sbjct: 535 -LAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDL-RNEKIGFKIREHTLLRVPYLV 592

Query: 434 IQGTGERSRGMLQIKDLAKGK---ELSRE 459
           I G  E+ + ++ I+    G+   ++S +
Sbjct: 593 ILGKNEQEQKIITIRK-HSGEDLGQMSVD 620


>gi|15889049|ref|NP_354730.1| threonyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|22654115|sp|Q8UEL1|SYT_AGRT5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15156846|gb|AAK87515.1| threonyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 667

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 55/401 (13%), Positives = 116/401 (28%), Gaps = 31/401 (7%)

Query: 98  NFDTIVFPCRTY-RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
           +             +     N        +   +   +  G      +    +  A    
Sbjct: 269 HGKGWRMFQTLTAYMRRRLANTYQEVNAPQVLDKSLWETSGHWGWYQENMFAVKSAHAFT 328

Query: 157 AVGIKRNDYHIG----INNRKILDGILEKIGLHGDD--KLNERLIVLRAIDKLDKFGLQG 210
               K  D  +     +N    +      +  + +   +L E   V R        GL  
Sbjct: 329 HPDDKEADQRVFALKPMNCPGHVQIFKHGLKSYREMPVRLAEFGNVHRYEASGALHGLMR 388

Query: 211 VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN 270
           V+        D++  F     + +E + I    LS+  +    E+   +        G +
Sbjct: 389 VRG----FTQDDAHVFCTEEQMAAECLRINDLILSVYEDFGFSEIVVKLSTRPEKRVGSD 444

Query: 271 ELVVISELVR----KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
           +L   +E V     K+    +  +I + I+ G   + G  +E  L   +  E Q      
Sbjct: 445 DLWDRAESVMLEVLKTIEEQSGGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQV 504

Query: 327 SVGGGGRY-----DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                 R+     D    + +   +           L + +++             V++ 
Sbjct: 505 DFNLPERFGAFYIDQNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPLQVVVA 564

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR----NCPLAIIQGT 437
           T+  D+D   +     + LR AG+  E    + K     + Y  R       P+ I+ G 
Sbjct: 565 TITSDADDYGR--EVAEALREAGMAVETDFRNEK-----INYKVREHSVTKVPVIIVCGR 617

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            E     + I+ L    + S  ++   +          +  
Sbjct: 618 KEAEERTVNIRRLGSQNQTSMSLEEAITSLVDEATPPDVKR 658


>gi|217967413|ref|YP_002352919.1| threonyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336512|gb|ACK42305.1| threonyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 638

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 35/117 (29%), Gaps = 4/117 (3%)

Query: 333 RYDGLVSRFKGQ-NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
            YD      +    +           + + ++              V I  +    +  +
Sbjct: 492 TYDAPDGTKRRPVMIHRAILGSYERFIGILVEHYGGRFPLWLAPEQVRILPISERHNEYA 551

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +Y    + LR   IRAE+          +L+ A     P   I G  E+    + ++
Sbjct: 552 EY--VLRNLRNNDIRAEID-KDQAKLNYKLRKAIAEKVPYIFIVGDKEKEENKVSVR 605



 Score = 41.7 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 10/192 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G    P K   +R  I +  R  +   G+ P+ TP L  ++ L K     D   + +F  
Sbjct: 258 GLIFYPPKGAMLRLIIEEFERKEHLKRGYFPVITPHLMQAE-LWKRSGHWDNYRENMF-F 315

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              + +  +++             +        R+YR  P+   E     R+ +      
Sbjct: 316 LQVEDKDYAVKPMNCPG-------HILIYNSKVRSYRDLPLRFFEMGTVYRYERSGVL-Y 367

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   T D        + LE       D+   + +   L   +  +    +  +   
Sbjct: 368 GLERARGFTQDDAHIFCTQEQLEDEIKGVLDFVFYMLDSFGLKEYVVTLSTKPEKYIGSD 427

Query: 194 LIVLRAIDKLDK 205
            I  +A   L  
Sbjct: 428 EIWEKATQALKN 439


>gi|195114918|ref|XP_002002014.1| GI17149 [Drosophila mojavensis]
 gi|193912589|gb|EDW11456.1| GI17149 [Drosophila mojavensis]
          Length = 691

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 42/132 (31%), Gaps = 18/132 (13%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +   +      + P  +  +          +     L  AG  +E+   +   
Sbjct: 567 ERMIAILTENYAGKWPFWLSPRQVMVVPVGPAYDEYAKTVRDELYAAGFMSEVDCDAGDT 626

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              +++ A        ++ G  ERS   + ++                           +
Sbjct: 627 MNKKIRNAQLAQFNFILVVGDKERSSKTVNVR------------------TRDNKVHGEV 668

Query: 477 PISELVSTVKKI 488
            ++EL+S ++KI
Sbjct: 669 SVAELISKLQKI 680



 Score = 39.8 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N +++ IR  Y   GF  + +P + Y+  L             +FS + + 
Sbjct: 315 FQPRGAHIYNTLMNLIRGEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYADNMFSFEAEK 373

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 374 -EKFALKPMNCPG 385


>gi|75760863|ref|ZP_00740877.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218898971|ref|YP_002447382.1| prolyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228902322|ref|ZP_04066479.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228966764|ref|ZP_04127808.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|226731427|sp|B7IUH7|SYP_BACC2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|74491647|gb|EAO54849.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218543850|gb|ACK96244.1| prolyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228792863|gb|EEM40421.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228857291|gb|EEN01794.1| Prolyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 566

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEMALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ +K +  +
Sbjct: 272 IEADKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEKGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|331697398|ref|YP_004333637.1| threonyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952087|gb|AEA25784.1| threonyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 682

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D     +     LR  G+R E+  G  +    +++    +  P  +
Sbjct: 569 WLAPVQVVGIPVTDDQREYVEQVAATLRERGVRVEVDSGDDR-MQKKIRTHTLQKVPFML 627

Query: 434 IQGTGERSRGMLQIKDLAKGKEL 456
           + G  +   G +  +    G ++
Sbjct: 628 VVGARDVEAGAVSFR-FRDGTQV 649



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G A    K   +R  + D  R  +E  G++ + TP +       +     +   +G
Sbjct: 277 QIGSGLAVFHPKGGIVRKELEDYSRRRHEQAGYEFVNTPHITKGQLF-RTSGHLEWYEEG 335

Query: 70  VF 71
           ++
Sbjct: 336 MY 337


>gi|308513249|ref|YP_003474861.2| threonine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|307346955|gb|ADC90325.2| threonine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 646

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 19/120 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    +  S        L+ AGIRAE     ++  G +++ A     P  +
Sbjct: 533 WLAPVQVRILSISDNQNSYCSELLAELKNAGIRAEFD-DRNEKIGFKVRAAQVEKIPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  E +   + ++                     R   I +P +E +S V   + + +
Sbjct: 592 IIGDQEMNEHRVSLR------------------LRDRQENIQLPTAEFISKVVAEIADRR 633



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + ++N +LD  R ++    +  I TP++     L +           +++ 
Sbjct: 260 GFPFFLPNGMILKNTLLDYWREVHRREDYREISTPIMLNRH-LWETSGHWFHYRDNMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 319 VI-DDEDFAIKPMNCPG 334


>gi|307545104|ref|YP_003897583.1| threonyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307217128|emb|CBV42398.1| threonyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 632

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +   +   +R +Y++ G+  I  P +    SL K     D  
Sbjct: 255 MQEEAP-GMVFWHPRGWTLWQVVEQYMRQVYKDGGYQEIRCPQVMDV-SLWKKSGHWDNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLA 92
             G+F   + + +  +L+        
Sbjct: 313 ADGMF-FTESEKREYALKPMNCPGHV 337



 Score = 36.7 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 34/104 (32%), Gaps = 3/104 (2%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
               + R I  L    +    +       +     D+          Q L+  G+R +  
Sbjct: 513 IVGSMERFIGILIEHYAGAMPLWLAPQQAVVLTITDAQ-RDYATYLEQRLQKKGLRVKAD 571

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           L  ++  G +++    +  P  ++ G  E     + ++    G+
Sbjct: 572 L-RNEKIGFKIREHTLQKVPYLLVVGDKEVEADSVAVRS-RSGE 613


>gi|302387069|ref|YP_003822891.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197697|gb|ADL05268.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 629

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 4/95 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  +       +  +     L+ A IR EM     +  G +++ A     P  +
Sbjct: 533 WLAPVQIKILPISEKFSTYSKEVLMKLKKADIRCEMD-ERDEKIGYKIREAQLEKVPYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           I G  E   GML ++     ++    I + E   +
Sbjct: 592 ILGEKEAETGMLSVR---SREQGDIGIMSIEKIID 623



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + ++N ++D  R I+E   +  I TP++  S  L +     D     +++ 
Sbjct: 260 GFPFFLPKGMILKNLLIDYWRKIHERERYVEISTPMM-LSRKLWETSGHWDHYKDNMYTT 318

Query: 74  QDDDGQWISLRYDLTAP 90
           +  D +  +++      
Sbjct: 319 KI-DEEDFAIKPMNCPG 334


>gi|301055309|ref|YP_003793520.1| prolyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300377478|gb|ADK06382.1| prolyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 566

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +   +  K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKELEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ +K +  +
Sbjct: 272 IEADKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|118595268|ref|ZP_01552615.1| prolyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118441046|gb|EAV47673.1| prolyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 411

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 40/115 (34%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++ +L  G        +R+  +I ++IR   +  G   +  P ++ ++ L +  
Sbjct: 26  MIRAGLIK-KLGSGLYTWMPMGLRVLKKIENTIREEMQQAGAVELLMPAIQPAE-LWEET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +  + D   +         ++   L R    ++  +       ++ 
Sbjct: 84  GRWELFGPQMLKISDRHDRPFCFGPTHEEVITDLVRNELNSYKQLPMNFYQIQMK 138


>gi|307103531|gb|EFN51790.1| hypothetical protein CHLNCDRAFT_56367 [Chlorella variabilis]
          Length = 594

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +  +   +       Q L+ AG+R E+   S  + G  ++ A++   P+  
Sbjct: 492 WLAPVQCRLVPVNDAVMGYVSGVAQALQAAGLRVEVS--SGLSVGKAIRAAEKDKIPVMC 549

Query: 434 IQGTGERSRGMLQIK 448
           + G  E S G + ++
Sbjct: 550 VVGQREASAGTVAVR 564



 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ + D  ++I+  YG+  + TP +   D L K     D     +F+ 
Sbjct: 216 GLVFWHPKGAMVRHLVEDFWKSIHLQYGYHLLFTPHIAKVD-LWKTSGHFDFYRDSMFNQ 274

Query: 74  QD 75
            D
Sbjct: 275 MD 276


>gi|328778641|ref|XP_395662.3| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Apis mellifera]
          Length = 718

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 81/273 (29%), Gaps = 5/273 (1%)

Query: 181 KIGLHGDDKLNERLIVLRAIDK--LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
              +      + R + LR  D   L +  + G    L   R     D     ++   + +
Sbjct: 412 HCMIFDVRNRSWRELPLRMADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCSVDQIKDE 471

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++ +   +    S+      +  +   EK   +L + ++  +    + +       I   
Sbjct: 472 MIGALEFLKHVYSVFGFTFNLCLSTRPEKYLGDLEMWNQAEKALAESLDAFGEQWKINPE 531

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---GFSIGI 355
              + G   +  +   +    Q   +        R++       G+           +G 
Sbjct: 532 DGAFYGPKIDITIMDALKRAHQCATIQLDFQLPIRFNLSYVNEAGEKTRPVIIHRAILGS 591

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
              ++A+ +   +      + P  +  +   S            L   G  AE+    S 
Sbjct: 592 VERMIAILTESYAGKWPFWLSPRQVMVIPVSSQFDDYAIQVKDKLWNDGFMAELDTDPSD 651

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +++ A        ++ G  E + G + ++
Sbjct: 652 TLNKKIRNAQLAQFNFILVVGEKELNAGTVNVR 684



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 3/105 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N +++ IR+ Y   GF  + TP + Y++ L +         + +FS  D +
Sbjct: 341 FQPRGAYIYNTLVEFIRSEYRKRGFQEVVTPNI-YNNKLWQTSGHWLHYAENMFSF-DVE 398

Query: 78  GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            +  +L+          +   N      P R    G + RNE  G
Sbjct: 399 KETFALKPMNCPGHCMIFDVRNRSWRELPLRMADFGVLHRNEMSG 443


>gi|254992869|ref|ZP_05275059.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 568

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 76/256 (29%), Gaps = 6/256 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G          +  +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   +               +  V L + +   +   D  K A    + I  +V FL 
Sbjct: 213 LSDIGEDXXXXXXXXXXXXNTEMAPV-LYMEKKSHELEKDMEKVATPDQKSIADIVEFLE 271

Query: 246 IDLEKSMHELYELVKG 261
           + +EK+M  +   V  
Sbjct: 272 VPIEKTMKSMLYQVDD 287



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 464 WDKQISPFDLHLIPVNMKSEEQVAFAETLYSSLQDAGFSVLIDDRAERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 557


>gi|218134037|ref|ZP_03462841.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991412|gb|EEC57418.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC
           43243]
          Length = 585

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 1/90 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   I   + + I++     G+  + TP +   +   K     D   + +F 
Sbjct: 201 RGLPMFLPKGYVIWQELENYIKDKERKLGYLHVMTPCIGTVNLY-KTSGHWDHYKENMFP 259

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTI 102
             D DG+   LR           A    + 
Sbjct: 260 AMDVDGESFVLRPMNCPHHMMIYANRMHSY 289



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/318 (8%), Positives = 80/318 (25%), Gaps = 7/318 (2%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M +     +       +   I  N       +  +IG    D   
Sbjct: 246 TSGHWDHYKENMFPAMDVDGESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGEIAHDFRY 305

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L+ I++   F      + +   + ++          ++ +   +  +  +   + 
Sbjct: 306 ESSGTLKGIERGRHFCQNDAHIFVTPEQIEDEFKRVVDLIFSTYKDFGITDYRCVLSLRD 365

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +  +         K  + L  +   +      +  I  ++     L+           
Sbjct: 366 PADKVKYHDDDEMWNKAEDALRTVLNDL--GIEYTEEIGEAAFYGPKLDVNVKPAVGNEY 423

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                          ++      D    +     +           +   L+  + +   
Sbjct: 424 TLSTCQLDFCLPAKFNLTY---IDKDGEKKTPVVLHRAILGSLDRFMAYILEETKGNLPT 480

Query: 372 IKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                 V +  +  D  + +         L    +R E+     +  G +++    +  P
Sbjct: 481 WLAPVQVRVMPVKTDNEELMEYAHEICSALEEKNVRVELD-DRGEKLGYRMREGQIQKVP 539

Query: 431 LAIIQGTGERSRGMLQIK 448
             ++ G  E+    +  +
Sbjct: 540 YLLVIGFNEKEDRTVSYR 557


>gi|189461814|ref|ZP_03010599.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136]
 gi|189431408|gb|EDV00393.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136]
          Length = 646

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/454 (10%), Positives = 112/454 (24%), Gaps = 84/454 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ D +R I   Y +  +  P                  NK ++ 
Sbjct: 261 KGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCP---------------PIGNKLLY- 304

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                  G   +  K          + +
Sbjct: 305 ------------------------------------VTSGHYAKYGKDAFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      +   + ++  ++           G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCMIYKNTPRSYRDLPLRIAEF-----------GTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK        D      K   L + +   +     ++ EK +
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKDEFLRVM-DIISIVFKSMGLENFEAQ-ISLRDKVNREKYI 435

Query: 253 HELYELVKGTIAGEKGFNE--LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                  K   A  +   E  L    E                  +             I
Sbjct: 436 GSDENWEKAEQAIVEACEEKGLKAKVEYGEA-----AFYGPKLDFMVKDAIGRRWQLGTI 490

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
                + E+ +    GS            + +   +    F      + V ++       
Sbjct: 491 QVDYNLPERFQLEYMGSDN---------QKHRPVMIHRAPFGSMERFVAVLIEHTAGKFP 541

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  V I  +    +  +        L+ + IRA +    ++  G +++  + +  P
Sbjct: 542 LWLTPDQVAILPISEKFNDYANQVRL--ELKKSDIRAIVD-DRNEKIGRKIRDNEMKRIP 598

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
             +I G  E   G + ++   +G + + +I++  
Sbjct: 599 YMLIVGEKEAENGEVAVRKQGEGDKGTMKIEDFA 632


>gi|118430888|ref|NP_146977.2| misacylated tRNAthr hydrolase [Aeropyrum pernix K1]
 gi|150421685|sp|Q9YFY3|SYT2_AERPE RecName: Full=Probable threonyl-tRNA synthetase 2; AltName:
           Full=Threonine--tRNA ligase 2; Short=ThrRS 2
 gi|116062213|dbj|BAA79028.2| misacylated tRNAthr hydrolase [Aeropyrum pernix K1]
          Length = 421

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 3/111 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +      + PV    +  DS+S    Q   + L  +G+R  +  GS    G +++
Sbjct: 302 RKEGLTPYLNPTLTPVQSAVIPVDSESEGYAQRIAEDLAASGVRVSIVRGSG--LGRRVR 359

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDL-AKGKELSREIKNNESWREARVA 472
            A R    L I+ G  E   G + ++     GK+    +    S  +   +
Sbjct: 360 EAGRSWASLVIVVGKREEETGTVVVRRRWEPGKQEVLTLDELSSEAKKLAS 410


>gi|85704335|ref|ZP_01035438.1| prolyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85671655|gb|EAQ26513.1| prolyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 451

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 34/109 (31%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         +I  ++ + +       G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQASAGIYSWLPLGFKILRKLENIVHEEQVRAGHIPVLMPTLQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   + +       +L   + R    ++  +       +  
Sbjct: 90  GAEMLRIKDRHDRDMLYGPTNEELITDIFRAHVGSYKDLPLTLYHIQWK 138


>gi|260891090|ref|ZP_05902353.1| threonine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260859117|gb|EEX73617.1| threonine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 636

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 35/106 (33%), Gaps = 3/106 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + + N++ +  R  ++  G+  I+TP++   + L +         + +++ 
Sbjct: 260 GFPFFMPKGVELFNKLQEIWRVEHKKRGYQEIKTPIMLDKE-LWEISGHWFNYRENMYTS 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
              D +  +++            +N                  +  
Sbjct: 319 TI-DEKEYAIKPMNCPGSIIAY-KNNLHSYKDLPLKYGEMGLVHRH 362



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCPLA 432
            + PV    +    + +   +     L+ AGIR E+     +  G +++ A+  +  P+ 
Sbjct: 533 WLAPVQARILTISDEQVPFAKELFTKLQDAGIRVELD-TRVEKIGYKIREANGDQKIPVQ 591

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +I G  E +   + ++    G + S+ I   +   +    +  +P S
Sbjct: 592 LIIGKNEVANNEVNVRRF--GSQDSKNIS-VDEIIKTLKQESFVPFS 635


>gi|145348306|ref|XP_001418593.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578823|gb|ABO96886.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 564

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 2/92 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +    +     +   + LR AG+R E+   + +     ++ A++   P+  
Sbjct: 462 WLAPIQVRLLPVTDEVSDYTEGVAKKLRDAGVRVEI--CTGQRLAKLVRTAEKAKIPVMA 519

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           + G  E     L ++    G   +  +    S
Sbjct: 520 VVGREEAENNTLAVRTFKDGDVGTLSVDEVLS 551



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ I    ++++   G++ + +P +   + L K     D  ++ ++  
Sbjct: 187 GLVFWHPKGAHMRHMIETYWKDLHLARGYELLYSPHVARQE-LWKTSGHSDFYSENMYQP 245

Query: 74  QDDDGQWISLRYDLTA 89
              + +   L+     
Sbjct: 246 IKVEDEMYQLKPMNCP 261


>gi|116872988|ref|YP_849769.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123458497|sp|A0AJ08|SYT_LISW6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116741866|emb|CAK20990.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 640

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/330 (9%), Positives = 88/330 (26%), Gaps = 7/330 (2%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M   + +       +   I  N+      +  +I   G     
Sbjct: 305 TSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGMMHRY 364

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L  + ++    L    + +   +  +         L   +   +  +      + 
Sbjct: 365 EMSGALSGLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELILEVYKDFDIKDYSFRLSYRD 424

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                +        EK    L    + +    + +     ++     L+           
Sbjct: 425 PKNTEKYFDDDAMWEKAQAMLKSAMDEMGMDYFEAEG--EAAFYGPKLDVQVKTAIGKEE 482

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
               +           +   G                +        +   ++  + +   
Sbjct: 483 TLSTVQLDFLLPERFDLTYIGEDGEKHRPVVIHRGVVSTME---RFVAYLIEEYKGAFPT 539

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 + +  ++ D+  L   +     L+ AG+R+E+    ++  G +++ A  +  P 
Sbjct: 540 WLAPVQMELIPVNADA-HLDYSKGVQDKLQRAGLRSEVD-DRNEKLGYKIREAQTKKIPY 597

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           A++ G  E   G + ++        + ++ 
Sbjct: 598 ALVLGDQEMEAGSVNVRRYGSKDSETMDLD 627



 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 8/105 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 261 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              D + + LR             +         +YR  P+   E
Sbjct: 320 MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAE 357


>gi|29840712|ref|NP_829818.1| threonyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301681|sp|Q821I3|SYT_CHLCV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29835062|gb|AAP05696.1| threonyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 635

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 32/89 (35%), Gaps = 2/89 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + + + + ++   + +++  G+  I TP L    SL +           +++L
Sbjct: 256 GMPFFHPRGMIVWDALIGYWQRLHQLAGYKQILTPQLMNR-SLWETSGHWSNYKANMYTL 314

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTI 102
           +  D +  +++         Y      + 
Sbjct: 315 KI-DEEDYAIKPMNCPGCMLYYKTRLHSY 342



 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/329 (8%), Positives = 81/329 (24%), Gaps = 7/329 (2%)

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            +   + Q     + + +    +         +  + I   DY I   N        +  
Sbjct: 279 HQLAGYKQILTPQLMNRSLWETSGHWSNYKANMYTLKIDEEDYAIKPMNCPGCMLYYKTR 338

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                +       +           L G+ + +     D++  F     +  E ++I+  
Sbjct: 339 LHSYKEFPLRIAEIGHVHRYEVSGALSGL-MRVRAFHQDDAHVFLTPEQVEEETLNILNL 397

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
              +     +    EL         G +EL  ++    +    ++          G  Y 
Sbjct: 398 VSELYSTFGLEYHLELSTRPEKDTIGSDELWELATSALERALINSNTPFIINPGDGAFYG 457

Query: 303 TGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
                          +       +           +    +     +    F      L 
Sbjct: 458 PKIDIHVKDAIQRTWQCGTIQLDMFLPERFELEYTNAQGEKSTPIMLHRALFGSIERFLG 517

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + ++  +           + + T+          +      +  G+   +   S+++   
Sbjct: 518 ILIEHFKGKFPLWLSPEHIRLITVA--DRHQPHAKELAAAWQKLGLVVTVD-DSNESVSK 574

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +++ A        +  G  E     L I+
Sbjct: 575 KIRNAQNMQVNYMVTLGDREIEENTLAIR 603


>gi|30263823|ref|NP_846200.1| prolyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529247|ref|YP_020596.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186669|ref|YP_029921.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321146|ref|ZP_00394105.1| COG0442: Prolyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|118479041|ref|YP_896192.1| prolyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165872601|ref|ZP_02217232.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635829|ref|ZP_02394138.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167639857|ref|ZP_02398126.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170687854|ref|ZP_02879068.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170706810|ref|ZP_02897268.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177652150|ref|ZP_02934696.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190568409|ref|ZP_03021316.1| prolyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196042144|ref|ZP_03109427.1| proline--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196044700|ref|ZP_03111935.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218904947|ref|YP_002452781.1| prolyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225865800|ref|YP_002751178.1| prolyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227813273|ref|YP_002813282.1| prolyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228916456|ref|ZP_04080022.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228928867|ref|ZP_04091899.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228947538|ref|ZP_04109828.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229092859|ref|ZP_04223993.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229123332|ref|ZP_04252536.1| Prolyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186058|ref|ZP_04313228.1| Prolyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229602364|ref|YP_002868057.1| proline--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254683474|ref|ZP_05147334.1| prolyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254721995|ref|ZP_05183784.1| prolyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254735857|ref|ZP_05193563.1| prolyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254739617|ref|ZP_05197311.1| prolyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254756010|ref|ZP_05208041.1| prolyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254759329|ref|ZP_05211354.1| prolyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81583682|sp|Q81WL6|SYP1_BACAN RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|152074739|sp|A0RHJ2|SYP1_BACAH RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|226731426|sp|B7JJ97|SYP_BACC0 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782882|sp|C3P5M1|SYP_BACAA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782883|sp|C3L7A8|SYP_BACAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782884|sp|C1EP43|SYP_BACC3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|30258467|gb|AAP27686.1| proline--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47504395|gb|AAT33071.1| prolyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180596|gb|AAT55972.1| prolyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|118418266|gb|ABK86685.1| proline--tRNA ligase [Bacillus thuringiensis str. Al Hakam]
 gi|164711633|gb|EDR17179.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512258|gb|EDR87635.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167528786|gb|EDR91544.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170128228|gb|EDS97097.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170668170|gb|EDT18919.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172082519|gb|EDT67584.1| prolyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560413|gb|EDV14391.1| prolyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196024735|gb|EDX63407.1| prolyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196026996|gb|EDX65620.1| proline--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218535709|gb|ACK88107.1| prolyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225789269|gb|ACO29486.1| proline--tRNA ligase [Bacillus cereus 03BB102]
 gi|227007610|gb|ACP17353.1| proline--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228597477|gb|EEK55127.1| Prolyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228660108|gb|EEL15744.1| Prolyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228690481|gb|EEL44264.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228812058|gb|EEM58389.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228830674|gb|EEM76279.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228843035|gb|EEM88117.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229266772|gb|ACQ48409.1| proline--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 566

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +   +  K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKELEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ +K +  +
Sbjct: 272 IEADKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|238027731|ref|YP_002911962.1| threonyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237876925|gb|ACR29258.1| Threonyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 635

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 39/120 (32%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +    +               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-NHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 2/98 (2%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
               + R +  L    +       + PV    M+   +         Q L+  G+R E  
Sbjct: 513 IVGSMERFLGILIEHHAGAMP-AWLAPVQAIVMNIAENQADYAGSLAQSLQKQGLRVEAD 571

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L + K      ++A  +  P  ++ G  ER    + ++
Sbjct: 572 LRNEKISYKIREHALEK-VPYLLVVGDKEREAQTVAVR 608


>gi|257066241|ref|YP_003152497.1| prolyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798121|gb|ACV28776.1| prolyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 572

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++ N+I   +R   EN+    + T +L+  +   +     +     +F 
Sbjct: 37  SGVYSFLPLGKKVINKIEAIVREAMENHDSIEVSTSILQAREI-WEASGRWETFGPEMFK 95

Query: 73  LQDDDGQWISLRY 85
           L+D   +   L  
Sbjct: 96  LKDRHDREYCLGP 108


>gi|82543879|ref|YP_407826.1| threonyl-tRNA synthetase [Shigella boydii Sb227]
 gi|187734126|ref|YP_001880509.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|123769450|sp|Q321L0|SYT_SHIBS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689503|sp|B2U397|SYT_SHIB3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81245290|gb|ABB65998.1| threonine tRNA synthetase [Shigella boydii Sb227]
 gi|187431118|gb|ACD10392.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 642

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|301629969|ref|XP_002944104.1| PREDICTED: threonyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 841

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  ++ P +    +L +     D+  + +F +
Sbjct: 261 GTVFWHPKGWMLWQEVEQYMRRVYRDNGYQEVKGPQI-LDKTLWEKTGHWDKYRENMF-I 318

Query: 74  QDDDGQWISLRYDLTAP 90
            + + +  +L+      
Sbjct: 319 TESEKRDYALKPMNCPG 335


>gi|225851210|ref|YP_002731444.1| threonyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645886|gb|ACO04072.1| threonyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 646

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +   +   + L+ AG+R E+   S +    +++ A+ +  P  +
Sbjct: 543 WLSPVQAKIIPVADTHIPYAKEVEKKLKEAGLRVEVDERSER-MNRKIRDAELQKIPYML 601

Query: 434 IQGTGERSRGMLQIK 448
           I G  E+  G + ++
Sbjct: 602 IVGDKEQQTGSVSVR 616



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
              K   IRN I  + +  +   G+  + TP +   + L +     D   + +F
Sbjct: 272 WLPKGAVIRNEIETAWKEEHIKRGYQLVYTPHV-GKEQLWQTSGHVDFYRENMF 324


>gi|254373138|ref|ZP_04988627.1| threonine-tRNA ligase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570865|gb|EDN36519.1| threonine-tRNA ligase [Francisella novicida GA99-3549]
          Length = 634

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 54/449 (12%), Positives = 114/449 (25%), Gaps = 91/449 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI  ++ D +R     YG   I TPL+       K        +K     
Sbjct: 260 GIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSG----HASK----- 310

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                 AEN                 ++E              V
Sbjct: 311 ---------------------YAENM-------------FATKSENRDFAIRPMNCPTCV 336

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       M    +          H  +  R                +    
Sbjct: 337 QVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVI 396

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG     + +     +  GD                       +++  
Sbjct: 397 LMVQQCFEVYKDFGFNDFAVKIALRPENRIGD-----------------------DETWD 433

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL+                 +   I R  +  T  +       
Sbjct: 434 KSEQMLKNALDANNVSYELLPGEG---AFYGPKIEFHLKDAIGRSWQCGTIQL------- 483

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D    +     +           + + ++    +     
Sbjct: 484 --------DFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLW- 534

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M   ++     +    ML   GIRA++ L  ++  G +++       P  +
Sbjct: 535 -LAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDL-RNEKIGFKIREHTLLRVPYLV 592

Query: 434 IQGTGERSRGMLQIKDLAKGK---ELSRE 459
           I G  E+ + ++ I+    G+   ++S +
Sbjct: 593 ILGKNEQEQKIITIRK-HSGEDLGQMSVD 620


>gi|70996464|ref|XP_752987.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66850622|gb|EAL90949.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159131721|gb|EDP56834.1| threonyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 535

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 52/446 (11%), Positives = 118/446 (26%), Gaps = 66/446 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          + NR++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 89  GSPLFLPNGTHVINRLISFLRTQYLQYGFREVLTPTI-YKRSLWEVSGHWQNYKDDMYEV 147

Query: 74  QDDD-----------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +               +   L+          + ++N      P R     P+ RNE  G
Sbjct: 148 KGRGATGEADGETGEDESYGLKPMNCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEISG 207

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
                      V                +  +   A+G    D  +          +L  
Sbjct: 208 ALSGLTR----VRRFHQDDGHIFCRPQQIKGEIASALGFV--DMVMTTFGLGPYRLVLST 261

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                     + +  L   D  +    + +     E   +       G  +  +  D   
Sbjct: 262 ------RPEKDFIGSLELWDSAEAQLREALDNSGREWAMNEGDGAFYGPKIDIQLQDQAG 315

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +  +   +    L +              L        +    +   + +  +V    +
Sbjct: 316 KYHQLSTIQLDMNLPQRFG-----------LEYQVAEGEEDYNPATPGRATPVLVHRANF 364

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
            +   + A+L                       +    R+     P  G  + +++    
Sbjct: 365 GSLERFLALL----------------------IEQYAGRWPFWLSPRQGIILTVNQDEAV 402

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+  + +   I    P        D+ +  K          +    ++   SS+  G ++
Sbjct: 403 LQQAQEAAAKISGYRP---LVAGQDNATSPKPLSSV----DSTYLIDVD-TSSQTLGKKI 454

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI 447
           + A +    L  I G  + +   + +
Sbjct: 455 QRAKQMKYNLIFILGPKDVADSSITV 480


>gi|268678723|ref|YP_003303154.1| threonyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268616754|gb|ACZ11119.1| threonyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 605

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 39/115 (33%), Gaps = 19/115 (16%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +      L   +     L    I  E+    +++   +++ A+    P+ ++ G
Sbjct: 507 PTQVVIVPISDAHLEYAKSVANALMAEEIDVEVS-SKNESLNKRIRNAETMRVPMILVIG 565

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             E     + ++D  +  +                    +   EL+ T+K+ L E
Sbjct: 566 DAEVENQSVAVRDRRERTQ------------------YNLSKVELIKTLKEKLSE 602


>gi|49481697|ref|YP_037880.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81395110|sp|Q6HEZ6|SYP1_BACHK RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|49333253|gb|AAT63899.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 566

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +   +  K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKELEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ +K +  +
Sbjct: 272 IEADKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|52141669|ref|YP_085160.1| prolyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81686584|sp|Q636K7|SYP1_BACCZ RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|51975138|gb|AAU16688.1| proline--tRNA ligase (prolyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 566

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +   +  K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKELEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ +K +  +
Sbjct: 272 IEADKCIKSM 281



 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEIKVEELQTYIAN 563


>gi|149180875|ref|ZP_01859377.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148851394|gb|EDL65542.1| threonyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 647

 Score = 54.5 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 43/135 (31%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +IRN +   +R I  ++ ++ + TP++     L +     +   + ++  
Sbjct: 265 GMPFYLNNGQKIRNELESFLRQIQNSFDYEEVRTPIMMNRK-LWEQSGHWEHYKENMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D Q  +L+             +         +YR  P+   E     R       + 
Sbjct: 323 SEVDDQSFALKPMNCPG-------HMLIFKDKLHSYRDLPIRMAEFGQVHRHEFSGALNG 375

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 376 MLRVRTFCQDDAHIF 390



 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 5/141 (3%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    + +   +    F      L + ++    +         V +  +          
Sbjct: 500 IDENNQKVRPVVIHRAVFGSIDRFLGILIEHFAGAFPVWLSPLQVSVIPVSKRHHG-QYC 558

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +     L+  G+R E  L   K  G +++ A  +  P  ++ G  E+    + ++  + G
Sbjct: 559 EEIRSRLKEEGLRVECDLREEK-LGYKIREAQMKKAPYILVVGDKEQESQTVNVR--SYG 615

Query: 454 KELSREIKNNESWREARVAQI 474
           ++ S+E +  E +      QI
Sbjct: 616 EQNSQE-EKLEEFIARVKQQI 635


>gi|332292754|ref|YP_004431363.1| threonyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170840|gb|AEE20095.1| threonyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 648

 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +           I T+          Q   
Sbjct: 509 NEMHRPVMIHRAPFGSMERFIAILLEHTGGNFPLWLMPQQATILTLS--EKYEKYAQNVL 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +L    IRA +     +  G +++ A+ +  P  II G  E + G + ++
Sbjct: 567 TLLENHEIRAIID-NRGETMGKKIREAEMQKLPFMIIIGEQEENDGTISVR 616


>gi|296160514|ref|ZP_06843330.1| prolyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295889263|gb|EFG69065.1| prolyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 578

 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/153 (9%), Positives = 42/153 (27%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEKYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRFR 126
           +D       +     ++   +AR   +++  +          +R     R        F 
Sbjct: 97  KDRKQSDFVIGPTHEEVVTDIARNQIKSYRQLPVNFYQVQTKFRDEIRPRFGVMRGREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D        +  +M          +G
Sbjct: 157 MKDAYSFDKDMDGLRESYRKMYDAYVRIFTRLG 189


>gi|126459705|ref|YP_001055983.1| prolyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166980146|sp|A3MV50|SYP_PYRCJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|126249426|gb|ABO08517.1| prolyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 487

 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 72/249 (28%), Gaps = 27/249 (10%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             E + +       E+   E V I + +      +  I       +         ++ +L
Sbjct: 164 FKEAHTVHVDREDAERQVREAVEIYKRIFDEMCLAYMINRRPDWDKFAGAVYTIAFDTVL 223

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLE 366
                 +       G+          ++    + +  T       R I A+         
Sbjct: 224 PDGRALQIGTVHYLGTKFTEVFEVTYLAPDGSRRLAHTTSYGISERSIAAMLITHGDDAG 283

Query: 367 SSTNNIKEMGPVLITTMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +          V++  + +  +     +   +   + LR AG R  +     K  G +  
Sbjct: 284 TVIPPKLAPIQVVVVPIFYGEEEKGVVMPAAEQAAKALREAGFRVHVDGRDDKTPGWKFY 343

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           Y + R  PL +  G  +     + +                   R   +A+  + + ELV
Sbjct: 344 YWELRGVPLRVEVGKRDVEGRQVVV------------------ARRDTLAKYAVAVDELV 385

Query: 483 STVKKILQE 491
             VK +L E
Sbjct: 386 DAVKALLSE 394



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        ++IR  +   IR +++  G + +  P+    +  GK         K V
Sbjct: 38  PVKGAYVWRPYGMKIRRNVEALIRRLHDETGHEEVLFPVFIPYEFFGKESEHIRGFEKEV 97

Query: 71  FSLQD--DDGQWISLRY 85
           F +    + G+ + LR 
Sbjct: 98  FWVSKGGEGGERLVLRP 114


>gi|325263251|ref|ZP_08129986.1| threonine--tRNA ligase [Clostridium sp. D5]
 gi|324031644|gb|EGB92924.1| threonine--tRNA ligase [Clostridium sp. D5]
          Length = 653

 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 43/148 (29%), Gaps = 3/148 (2%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    + +   +  T        L   ++              V I  +      L   
Sbjct: 505 IDQNGDKVRPYIIHRTSIGCYERTLAWLIEKYAGMFPTWLCPEQVRILPVS--DKYLDYA 562

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 ++   I   +    S+  G +++ A     P  +I G  E + G + ++    G
Sbjct: 563 DKVENEMKANNILCTVD-SRSEKIGYKIREARLAKIPYMLIVGEKEEAEGTVSVRSRFLG 621

Query: 454 KELSREIKNNESWREARVAQITIPISEL 481
            E ++ ++         +    I   E+
Sbjct: 622 DEGAKGLQGFIDDVCREIRTKEIRKIEV 649



 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 38/116 (32%), Gaps = 5/116 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K  +I   +   I +  +N +G+   +TPL+  SD         D    G+F 
Sbjct: 260 GLPLLMPKGAKIIQTLQRWIEDEEDNNWGYIRTKTPLMAKSDLYQ-ISGHWDHYKDGMFV 318

Query: 73  LQDD--DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           L D+  + +  +LR  +T P   YV +                         G   
Sbjct: 319 LGDEETNKEVFALRP-MTCPFQYYVYKASQKSYRDLPLRYSETSTLFRNEDSGEMH 373


>gi|260575893|ref|ZP_05843888.1| prolyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021819|gb|EEW25120.1| prolyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 445

 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 34/109 (31%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  RI   +    +  G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQQAAGIYSWLPLGFKVLRRIEQIVHEEQQRAGHIPLLMPTLQPAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            + +  + D   + +       ++   + R    ++  +       +  
Sbjct: 90  GEEMLRITDRQKRELLYGPTNEEMITDIFRSHVTSYKDLPLTLYHIQWK 138


>gi|227543651|ref|ZP_03973700.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300908708|ref|ZP_07126171.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186362|gb|EEI66433.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894115|gb|EFK87473.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 627

 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/241 (8%), Positives = 74/241 (30%), Gaps = 5/241 (2%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D + + +     ++     +K +    +  +         + + +    
Sbjct: 382 KILKLIMSVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLNLDYYE 441

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----YDGLVSRFKGQNVPATGF 351
             G   + G   +      + N++    +        R    Y G   +     +   G 
Sbjct: 442 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGV 501

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R +  L  +             +     ++           + ++ A IR  +  
Sbjct: 502 VGTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNVDH 561

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A  +  P  ++ G  E++   + ++   + ++     +   +     +
Sbjct: 562 -RNEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMNEILEDI 620

Query: 472 A 472
           A
Sbjct: 621 A 621



 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  R + +  G+  + TP+L   D+  K     +     +F
Sbjct: 243 GLPYWLPKGATIRRTIERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWEHYRDDMF 299

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 300 PPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQRV 359

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                 +  A++  ++    E   I    + + + + K +        
Sbjct: 360 REMTLNDGHTFVTLDQIRSEFAKILKLIMSVYEDFDITDYSFRLSLRDPKNVKKYYANDE 419

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 420 MWEKSQSM 427


>gi|166365900|ref|YP_001658173.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166088273|dbj|BAG02981.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 618

 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 1/102 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +    +           L+ AG R E+   + +  G Q++  +    P+  
Sbjct: 516 WLAPIQVRLLPVSDEQQHYALGVAMQLKQAGYRVEID-KTGERLGKQIRTGELEKIPVLA 574

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E S   L ++    G   S  + +     +  +   T
Sbjct: 575 VIGKREVSSKTLSVRTRQGGDLGSMTLVDLLGKMQTAILSKT 616



 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      +   +R  I D  R  +   G+  + TP L   D L K     D     +F
Sbjct: 241 GLVFWHPRGATMRYLIEDYWRQAHLEAGYQFLYTPHLANLD-LWKTSGHWDFYRDNMF 297


>gi|194467309|ref|ZP_03073296.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454345|gb|EDX43242.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 601

 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/241 (8%), Positives = 74/241 (30%), Gaps = 5/241 (2%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D + + +     ++     +K +    +  +         + + +    
Sbjct: 356 KILKLIMSVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLNLDYYE 415

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----YDGLVSRFKGQNVPATGF 351
             G   + G   +      + N++    +        R    Y G   +     +   G 
Sbjct: 416 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGV 475

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R +  L  +             +     ++           + ++ A IR  +  
Sbjct: 476 VGTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNVDH 535

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A  +  P  ++ G  E++   + ++   + ++     +   +     +
Sbjct: 536 -RNEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMNEILEDI 594

Query: 472 A 472
           A
Sbjct: 595 A 595



 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  R + +  G+  + TP+L   D+  K     +     +F
Sbjct: 217 GLPYWLPKGATIRRTIERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWEHYRDDMF 273

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 274 PPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQRV 333

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                 +  A++  ++    E   I    + + + + K +        
Sbjct: 334 REMTLNDGHTFVTLDQIRSEFAKILKLIMSVYEDFDITDYSFRLSLRDPKNVKKYYANDE 393

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 394 MWEKSQSM 401


>gi|91205619|ref|YP_537974.1| prolyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157827332|ref|YP_001496396.1| prolyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|114152245|sp|Q1RIC9|SYP_RICBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|166980150|sp|A8GU77|SYP_RICB8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91069163|gb|ABE04885.1| Prolyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157802636|gb|ABV79359.1| prolyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 432

 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 46/162 (28%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I + +R+  +  G   +  P ++ +  L       D  
Sbjct: 31  MIRQQAAGIYSWLPLGLKVLKNIENIVRSNMDKAGCLEVLMPCIQPAH-LWVESGRFDNY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +   QD     +       D+   + R   +++  +       +         R   
Sbjct: 90  GKEMLKFQDRHDNTLLFGPTNEDMVTDIFRNNIKSYKDLPKNLYHIQWKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F        D    SA     +M     +T   +G+ 
Sbjct: 150 MRGREFLMKDAYSFDIDEESAVKTYNQMYKAYINTFRDLGVF 191



 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 1/98 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +      LI    HDS  L   +     L    I   ++  +    G++    D 
Sbjct: 326 IWPIAVAPFKISLINLNIHDSKCLELAERVYNELLAQNIEV-LYDDTDVRAGSKFATHDL 384

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
              P  II G  + +  ++++K+   G+    ++    
Sbjct: 385 IGSPYQIIIGPKKAANNIVELKNRKNGEIEDIDLNKRA 422


>gi|83645563|ref|YP_433998.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|83633606|gb|ABC29573.1| Threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 415

 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 44/117 (37%), Gaps = 20/117 (17%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +       D+++  +   ++LR  G+  EM L +  +   ++K   R   PL +
Sbjct: 299 WVHPQPVVLASVGQDAVAYCESVGELLRRHGVPVEMDLAND-SLAKKMKVLRRYKTPLVL 357

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           I G  E +   + ++    G++                        ELV+ V++ L 
Sbjct: 358 IAGAQEMANDSIVVR-RRGGEQALA------------------SRDELVAIVREALS 395



 Score = 40.6 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 47/187 (25%), Gaps = 9/187 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    +  R+   + + IR  YE   F  + TP     + L +     ++    +F  
Sbjct: 22  GMAFWHPRGWRMFRTVKNHIRAAYEAESFQEVATPQFLKRE-LWETSGHWEKYADDMFVG 80

Query: 74  QDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                +   +L+             +        R+Y+  P+   E     R  +    +
Sbjct: 81  AGFGEEPEYALKPMSCP-------AHILLYKRGVRSYKSLPLRLFEFGLVHRNERSGALN 133

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                      DA +        + +            +       +        D    
Sbjct: 134 GLMRLRQFTQDDAHVFCRWDQVSQEIQAFLRRAERVYADYGYGRPQVFISTRPQRDYFGA 193

Query: 193 RLIVLRA 199
                RA
Sbjct: 194 PEDWERA 200


>gi|78066086|ref|YP_368855.1| threonyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123756187|sp|Q39H55|SYT_BURS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77966831|gb|ABB08211.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia
           sp. 383]
          Length = 635

 Score = 54.5 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 30/98 (30%), Gaps = 2/98 (2%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
               + R +  L    +            +  ++         Q   Q L+  G+R    
Sbjct: 513 IVGSMERFLGILIEHHAGAMPAWLAPFQAV-VLNIAESQAEYAQSLAQSLQKQGVRVTAD 571

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L  ++    +++       P  ++ G  ER    + ++
Sbjct: 572 L-RNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVR 608


>gi|307731045|ref|YP_003908269.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585580|gb|ADN58978.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 578

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEKYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQSDFVIGPTHEEVVTDIARGQIKSYRQLPVNFYQIQTK 138


>gi|153003352|ref|YP_001377677.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|166980097|sp|A7H7J7|SYP_ANADF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152026925|gb|ABS24693.1| prolyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 575

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 33/116 (28%), Gaps = 11/116 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D      R   +I   +R   +  G      P L  ++   K     +     +F L
Sbjct: 41  GIYDYLPLAKRTLAKIEAIVREEMDAIGGQEFYLPALHPAEI-WKESGRWEVMGDNMFRL 99

Query: 74  QDDDGQWISLRYDLT-----APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           +D       L   +T       +AR   +   +     + +        ++  P  
Sbjct: 100 KDRKNGDYCLG--MTHEEIFTAIAR---DELRSYRQLPQVWYQIQTKFRDEPRPKS 150



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 1/86 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L              + T+  + +         + L  AG+         +  G + K
Sbjct: 464 DELGIRWPPAIAPFQATVLTLGPEPELKKAADELVKALSDAGLEVLHDDREERA-GVKFK 522

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIK 448
            AD    PL I  G    + G ++ K
Sbjct: 523 DADLVGIPLRISVGKKGLAEGKVEWK 548


>gi|147669325|ref|YP_001214143.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Dehalococcoides
           sp. BAV1]
 gi|189083604|sp|A5FRB3|SYT_DEHSB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146270273|gb|ABQ17265.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Dehalococcoides
           sp. BAV1]
          Length = 582

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 78/257 (30%), Gaps = 13/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +       +R+ I +  +  +   G+D + TP +   D L K         + ++S 
Sbjct: 205 GLVNWLPNGAIVRHLIEEFWKKEHLKRGYDLVYTPHIAKVD-LWKTSGHWGFYRENMYSP 263

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D DG+   L+             +        R+Y+  P+   E     R+ +      
Sbjct: 264 MDIDGEEYVLKPMN-------CVYHILMFKNRTRSYKELPIRMAELGTVYRYERSGVLH- 315

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                   T D      + D LE   +K  D    + +          +    +  + E 
Sbjct: 316 GLSRVRGFTQDDAHIFCLYDQLEKEVVKVLDLAKFMIDTFGFTKYKVMLSTRPEKYVGEL 375

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                A D L     + ++      + D       G  +  +  D +         +   
Sbjct: 376 DKWEYATDILA----KALEANQIPYQVDPGEGVFYGPKIDIKFEDALGRAWQGPTIQVDF 431

Query: 254 ELYELVKGTIAGEKGFN 270
           +L E    ++ GE G +
Sbjct: 432 QLPERFDVSVVGEDGKD 448



 Score = 37.1 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 7/56 (12%), Positives = 19/56 (33%), Gaps = 1/56 (1%)

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              +++ A     P  ++ G  E     + ++    G +        +S   A++ 
Sbjct: 522 MNQKIRQAQLAKIPYMLVVGDKEIETQSVAVRT-RTGSQQVMPFAEFKSMLLAKIK 576


>gi|322495387|emb|CBZ30691.1| putative threonyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 787

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 59/478 (12%), Positives = 137/478 (28%), Gaps = 27/478 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N +++ +R  Y   GF  + +P + YS  L       ++    +F  
Sbjct: 306 GSAFWLPHGARIYNTLVEFLRKKYRCCGFQEVISPNM-YSSKLWMVSGHWEKYADNMFCT 364

Query: 74  QDDDGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG------PGRFR 126
           +  + +   L+          + ++       P R    G + RNE  G        R  
Sbjct: 365 K-CEKEDFGLKPMNCPGHCIMFASQPHSYKELPIRYADFGVLHRNELSGALTGLTRVRRF 423

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK------------- 173
           Q     +                 ++D    +G K   YH      K             
Sbjct: 424 QQDDAHIFCRMDQITDEMEGQMQFLSDVYGVLGFKFYFYHSTRPANKLGSDALWDQSESY 483

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +   +    G+  +             D       +   L+    R+++   +    N +
Sbjct: 484 LRTALNRFCGIPEELPDPLHPDQRFHYDGKPDSVKKMKMLMKKAERSEDPNAWKGPTNGS 543

Query: 234 SEQIDIMVS--FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
              I+      F    ++  + +           +  FN                +   +
Sbjct: 544 EGWIENAGDGAFYGPKIDIVVEDALRRRHQCATIQLDFNLPSRFGLKYTLPTAEKDEATV 603

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
             T  R           +         K KP  + +       D  +   + + V     
Sbjct: 604 GPTEKRRHADPASTA--SSPAVAEGESKPKPGTYEAAVRDLGIDLELDANQARPVMIHRA 661

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            +G     +A+       +    + P  +  +   + +    Q     +  AG  A++  
Sbjct: 662 ILGSLERSIAILCEHFGGDWPFWLSPRQVMVVPVSASNYEYSQQVRDTMHDAGFHADVDN 721

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           G++     +++ A++      ++ G  E+    + I+   + +  ++ ++    W + 
Sbjct: 722 GAA-TLDKKIRNAEKARYNFILVVGQQEQDATGVNIRARGERRLGNKSLEEALQWFKE 778


>gi|227877040|ref|ZP_03995129.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256843644|ref|ZP_05549132.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256850110|ref|ZP_05555540.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|293381761|ref|ZP_06627738.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|227863358|gb|EEJ70788.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256615064|gb|EEU20265.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256713082|gb|EEU28073.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|290921681|gb|EFD98706.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 644

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 3/138 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN-IKEMGPVLITTMDHDSDSLS 391
            Y G         +   G    + R I  L  +             V I  ++ D+    
Sbjct: 500 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQVKIIPVNLDAHG-E 558

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +   Q L   G RAE+    ++  G +++ +  +  P  ++ G  E   G + ++   
Sbjct: 559 YAEKVRQELAKRGFRAEVD-TRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYG 617

Query: 452 KGKELSREIKNNESWREA 469
             +E+S+ + +  +  +A
Sbjct: 618 TDEEISKSLTDFINEIDA 635



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYRDDMF 316

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 317 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 376

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                +T  A++  ++ D  +   I    + +   + K  D       
Sbjct: 377 REMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDE 436

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 437 MWERSQKM 444


>gi|205352944|ref|YP_002226745.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|238690498|sp|B5RAX3|SYT_SALG2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|205272725|emb|CAR37641.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326628018|gb|EGE34361.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMGRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 632



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMGRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 425 DKRIGSDEMWDRAEADLAVALEENN 449


>gi|193065767|ref|ZP_03046830.1| threonyl-tRNA synthetase [Escherichia coli E22]
 gi|194428543|ref|ZP_03061082.1| threonyl-tRNA synthetase [Escherichia coli B171]
 gi|218554286|ref|YP_002387199.1| threonyl-tRNA synthetase [Escherichia coli IAI1]
 gi|260844071|ref|YP_003221849.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855585|ref|YP_003229476.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868246|ref|YP_003234648.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293446093|ref|ZP_06662515.1| threonyl-tRNA synthetase [Escherichia coli B088]
 gi|331668404|ref|ZP_08369252.1| threonine--tRNA ligase [Escherichia coli TA271]
 gi|331677592|ref|ZP_08378267.1| threonine--tRNA ligase [Escherichia coli H591]
 gi|226701402|sp|B7M1C7|SYT_ECO8A RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|192926539|gb|EDV81170.1| threonyl-tRNA synthetase [Escherichia coli E22]
 gi|194413421|gb|EDX29704.1| threonyl-tRNA synthetase [Escherichia coli B171]
 gi|195182909|dbj|BAG66479.1| threonyl-tRNA synthetase [Escherichia coli O111:H-]
 gi|218361054|emb|CAQ98632.2| threonyl-tRNA synthetase [Escherichia coli IAI1]
 gi|257754234|dbj|BAI25736.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759218|dbj|BAI30715.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764602|dbj|BAI36097.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|291322923|gb|EFE62351.1| threonyl-tRNA synthetase [Escherichia coli B088]
 gi|323153043|gb|EFZ39312.1| threonyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|331063598|gb|EGI35509.1| threonine--tRNA ligase [Escherichia coli TA271]
 gi|331074052|gb|EGI45372.1| threonine--tRNA ligase [Escherichia coli H591]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|170695316|ref|ZP_02886462.1| prolyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170139716|gb|EDT07898.1| prolyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 578

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEKYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQSDFVIGPTHEEVVTDIARGQIKSYRQLPVNFYQIQTK 138


>gi|146311380|ref|YP_001176454.1| threonyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166987323|sp|A4W9M3|SYT_ENT38 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145318256|gb|ABP60403.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Enterobacter
           sp. 638]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/349 (13%), Positives = 92/349 (26%), Gaps = 10/349 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEGQVRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDETWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + +P       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPQRLSASYVGEDNERQIPVMIHRAILGSIERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         +  TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQADYVKELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQITI 476
           ++ G  E   G + +     KDL          K     R   + Q+ +
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSLDVNEVIEKLRLEIRSRSLQQLEV 642



 Score = 40.6 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH 371


>gi|313888403|ref|ZP_07822071.1| threonine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845600|gb|EFR32993.1| threonine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 636

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 45/117 (38%), Gaps = 19/117 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     L  AG+R  +  G ++  G +++ A  +     +
Sbjct: 533 WLSPVQVEVIPVSDKFKDFAESIADKLHAAGLRVHLD-GRAEKVGYKIREAQVKKINYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           + G  E + G L ++    G+E+                   + + E ++++K+ ++
Sbjct: 592 VIGEKEETSGKLSVRK-RNGEEV-----------------QDVDVDEFIASLKEEIK 630



 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN +L+  R + +  G+  I TP++  +++L       D     ++  
Sbjct: 260 GFPFFHPNGMILRNNLLNWWRGVLDENGYGEILTPII-LNEALWHRSGHWDHYKDNMYFT 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
           + DDG   +++             N  +   
Sbjct: 319 KIDDG-DYAVKPMNCPGSILVYNSNKHSYRD 348


>gi|184154400|ref|YP_001842741.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364219|ref|ZP_03848315.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|325683422|ref|ZP_08162938.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|183225744|dbj|BAG26261.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070764|gb|EEI09091.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|324977772|gb|EGC14723.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 627

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/241 (8%), Positives = 74/241 (30%), Gaps = 5/241 (2%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D + + +     ++     +K +    +  +         + + +    
Sbjct: 382 KILKLIMSVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLNLDYYE 441

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----YDGLVSRFKGQNVPATGF 351
             G   + G   +      + N++    +        R    Y G   +     +   G 
Sbjct: 442 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGV 501

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R +  L  +             +     ++           + ++ A IR  +  
Sbjct: 502 VGTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADDLAKKMKAANIRVNVDH 561

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A  +  P  ++ G  E++   + ++   + ++     +   +     +
Sbjct: 562 -RNEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMNEILEDI 620

Query: 472 A 472
           A
Sbjct: 621 A 621



 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  R + +  G+  + TP+L   D+  K     +     +F
Sbjct: 243 GLPYWLPKGATIRRTIERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWEHYRDDMF 299

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 300 PPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQRV 359

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                 +  A++  ++    E   I    + + + + K +        
Sbjct: 360 REMTLNDGHTFVTLDQIRSEFAKILKLIMSVYEDFDITDYSFRLSLRDPKNVKKYYANDE 419

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 420 MWEKSQSM 427


>gi|270261557|ref|ZP_06189830.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270045041|gb|EFA18132.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 95/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMG 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + +E  + +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQVRAEVNECIRMVYDVYGTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +++   +E    +    N I        G  Y     +       
Sbjct: 416 IAVKLSTRPEKRIGTDDMWTRAEEDLAAALTENGIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQ--KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              +    +   F     G  Y G  +      +        + R I  L    +     
Sbjct: 476 RAWQCGTVQLDFFLPGRLGASYVGENNDRVVPVMIHRAILGSMERFIGILTEEYAGFYP- 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWIAPVQVVVMNITDSQSDYVQQLTKKLQEAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  +  R   + Q+ 
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSLDVNEVVDKLLKEIRSRSLHQLE 641



 Score = 39.8 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 51/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   + + +  V      +          + I  K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRAEVNECIRMVYDVYGTF--------GFEKIAVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA + L     +
Sbjct: 425 EKRIGTDDMWTRAEEDLAAALTE 447


>gi|189200603|ref|XP_001936638.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187983737|gb|EDU49225.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 768

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 51/478 (10%), Positives = 123/478 (25%), Gaps = 64/478 (13%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N +   +R  Y N G+  + +P + Y+ +L K           +F+  D +
Sbjct: 348 FLPHGQIIYNTLQAFLREEYWNRGYQEVGSPNM-YNSALWKISGHWQHYADDMFTF-DVE 405

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + +     
Sbjct: 406 KEKWALKPMNCPG-------------HCLIFKHRERSYRELPIRMADFGILHRNEASGAL 452

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I      +    R +         +    +    L  +
Sbjct: 453 TGLTRVRRFQQDDTHVFCTQDQITEEISALFDFLRAVYGKFGFTFKMKLSTRPEGFLGDI 512

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              DK +    + +      G +    +   GA    +    +   L  + + +  +L  
Sbjct: 513 ETWDKAEAKLTEALNQFTAAGGSAWELNPGDGAFYGPKIDITISDALKREFQCATIQLDF 572

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            +      E   +E                + K        +E     +  A +  P   
Sbjct: 573 QLPNQFELEYMTSE------------VIPVKNKDQPQEGGHIEQKKEKLEGADVTIPKKI 620

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL--ESSTNNIKEM 375
           ++ +P     V                            R I  L           +   
Sbjct: 621 KEPQPGYARPVMIHRA-----------------IYGSFERFIAILTEHFAGRWPFWLSPR 663

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
             ++I  M   +D + + Q     LR   + A++ +  +     +++ A        ++ 
Sbjct: 664 QVMVIPVMPGANDYVKEVQA---ELRKHRLHADIDISGN-TMQKKIRTAQLALYNFIMVV 719

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           G  E+    +  ++                 +E +   + +P+ E V  + ++  E +
Sbjct: 720 GAEEQQARAVNWRNRDD--------------QETQQRGVIVPLDEAVKKLVELRDERR 763


>gi|147920005|ref|YP_686240.1| threonyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121683020|sp|Q0W3X9|SYT_UNCMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110621636|emb|CAJ36914.1| threonyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 641

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/389 (9%), Positives = 92/389 (23%), Gaps = 20/389 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
              ++              E   P  +          +          +       L   
Sbjct: 247 MKNMLEQFVLSEAAKKGAMEVETPIMYDMEHPTLKKYLDRFPARQYTVIADKKNLFLRFA 306

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                            +  L+ I L       E+   L  + +L  F +  +  L  + 
Sbjct: 307 ACFGQFLMNHDMTISYRNLPLKMIELTRYSFRKEQRGELVGLRRLRAFTMPDMHTLCTDM 366

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
                 +F     +    +D +   +  D E ++    +         +    LV  +  
Sbjct: 367 DG-AIKEFGDQYEMCINTLDTIGIDIKTDYEVAIRFTKDFYNNNTPFIQS---LVKRAGK 422

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
                    R              +     A+    +  E  +      V   G     +
Sbjct: 423 PVIVEMWEERFFYFVLKFEFNYIDSLNKASALSTVQIDVENAERYDINYVDQNGNRQRPI 482

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
                 +        G+           +       + P  +  +      +   +    
Sbjct: 483 ILHCSPSGAIERCIYGLLEKEAMESEKGAVPMLPVWLSPTQVRIVTISEKHVPFAEALAD 542

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
             R   +R ++     +  G +++ A +   P  +  G  E +   +             
Sbjct: 543 --RMCNVRVDIDDRE-ETVGKKIRDAGKEWIPYVVTIGDAEMNGDKI------------- 586

Query: 459 EIKNNESWREARVAQITIPISELVSTVKK 487
            +      ++ + A++ + + ELV  + K
Sbjct: 587 PVVVRAESQQNKPAKVEMTVEELVERIHK 615


>gi|326800360|ref|YP_004318179.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326551124|gb|ADZ79509.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 641

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
               +          +   + L    IR  + L   +  G +++ A+ +  P  +I G  
Sbjct: 548 QFIILPVSEKYEEYAKKLLESLNNTDIRGLIDL-RDEKVGRKIRDAEVKKIPYMLIVGEK 606

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           E   G + ++   K  E        E++ +  + +IT+
Sbjct: 607 EVENGTISVR---KHGEGDLGSMTIEAFSKQLIEEITV 641



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 20/47 (42%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R +++D ++      G++P+ TP + + +      
Sbjct: 262 GLPLWLPKGAALRQKLVDFLQRAQMKAGYEPVVTPHIGHKNLYVTSG 308


>gi|296272187|ref|YP_003654818.1| prolyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096362|gb|ADG92312.1| prolyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 572

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 52/194 (26%), Gaps = 26/194 (13%)

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
            T       L      E       G+          +           G        +VA
Sbjct: 397 DTCSCCGGKLIHTKGIEAGHIFQLGTKYSSAMDATFLDNNGKAQPFIMGCYGIGVSRLVA 456

Query: 362 L------KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
                                 V +   +    + L+  +     L+ AGI   +    +
Sbjct: 457 AVIEQNHDDKGCIWTKETAPFMVDVIVSNAKKEEELNAGKKIYNDLKIAGISTILDDRVN 516

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             FG ++   +    P A++ G      G+++I +    ++                   
Sbjct: 517 ARFGFKMSDFELIGFPYAVVVGKK-LPEGIVEIVNRKTLEKE------------------ 557

Query: 475 TIPISELVSTVKKI 488
            + + E+V+ +KK+
Sbjct: 558 EVSLDEVVNKLKKL 571



 Score = 41.0 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 8/79 (10%), Positives = 23/79 (29%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              +   G  +       + ++I   ++   +N G + +    +   + L +        
Sbjct: 31  FITQTGSGLYNFLPLGKIVLDKIRAVVKEEMDNTGANELLMSFVTPLE-LWEQSGRASVM 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D  G    L  
Sbjct: 90  GPELLKFKDRKGAGFVLSP 108


>gi|291320287|ref|YP_003515549.1| threonyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752620|emb|CBH40593.1| Threonyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 582

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/142 (10%), Positives = 44/142 (30%), Gaps = 2/142 (1%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D      +   +           + + L+  + +         V I  ++   + LS  
Sbjct: 443 IDKNNKEVRPIMIHRGLIGTYERFVAILLEQTKGNLPFWIAPKQVTIIPVNLSEN-LSYA 501

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + L  +  R ++   S +    +++ A        +I G+ E +   +  ++  K 
Sbjct: 502 KKVAKKLLNSDFRVKID-DSDERLNKKIRNAQVSKSKFQLILGSNEMNSNTVSYREYGKE 560

Query: 454 KELSREIKNNESWREARVAQIT 475
           +  +  I +     +       
Sbjct: 561 ETTTVSINDFIKLLKKLRNNYE 582



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + I N I + +  + + YGF  + TP    ++ L K           +F  
Sbjct: 202 GFPIWLENGMYIHNEIKNLVLKLDKKYGFTEVLTPHF-GAELLYKTSGHLAHYKDDMFKP 260

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              + + +  R  +T P       +         +YR  P+  +E+    R+ +
Sbjct: 261 LLVENETLIPRP-MTCP------HHIIVYNTEKHSYRDLPIRYSEQSQLYRYEK 307


>gi|188526926|ref|YP_001909613.1| threonyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|238691884|sp|B2URV1|SYT_HELPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188143166|gb|ACD47583.1| threonyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 612

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEHNHAE 480


>gi|162218055|ref|YP_620875.2| threonyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|162227933|ref|YP_835120.2| threonyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|254245609|ref|ZP_04938930.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia
           PC184]
 gi|124870385|gb|EAY62101.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia
           PC184]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370


>gi|159043296|ref|YP_001532090.1| prolyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189083497|sp|A8LQU6|SYP_DINSH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157911056|gb|ABV92489.1| prolyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 445

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  RI + +    +  G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQASAGIYSWLPLGYKVLRRIEEIVHEEQQRAGHIPMLMPTLQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWI 81
            + +  + D  G+ +
Sbjct: 90  GQEMLRITDRHGRDM 104


>gi|170732802|ref|YP_001764749.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|238688618|sp|B1K091|SYT_BURCC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169816044|gb|ACA90627.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370


>gi|91786735|ref|YP_547687.1| prolyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123356060|sp|Q12FA3|SYP_POLSJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91695960|gb|ABE42789.1| prolyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 580

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/109 (8%), Positives = 39/109 (35%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P+++ ++   +     ++ 
Sbjct: 31  MIKKLGAGIYSYMPMGLRVIRKVEAIVREEMNRAGAVEMTMPVIQPAE-FWQETGRFEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D  G+   ++    ++   + R   +++  +       +  
Sbjct: 90  GPELLRIKDRHGRDFVVQPTSEEVITDVMRQDIKSYKQLPKNLYQIQTK 138


>gi|148545068|ref|YP_001272438.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus
           reuteri DSM 20016]
 gi|148532102|gb|ABQ84101.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus
           reuteri DSM 20016]
          Length = 601

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/241 (8%), Positives = 74/241 (30%), Gaps = 5/241 (2%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D + + +     ++     +K +    +  +         + + +    
Sbjct: 356 KILKLIMSVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLNLDYYE 415

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----YDGLVSRFKGQNVPATGF 351
             G   + G   +      + N++    +        R    Y G   +     +   G 
Sbjct: 416 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGV 475

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R +  L  +             +     ++           + ++ A IR  +  
Sbjct: 476 VGTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADDLAKKMKAANIRVNVDH 535

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A  +  P  ++ G  E++   + ++   + ++     +   +     +
Sbjct: 536 -RNEKMGYKIREAQTQKVPYTLVVGDDEKNNNGVSVRKYGEKEQNEMSQEAFMNEILEDI 594

Query: 472 A 472
           A
Sbjct: 595 A 595



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  R + +  G+  + TP+L   D+  K     +     +F
Sbjct: 217 GLPYWLPKGATIRRTIERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWEHYRDDMF 273

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 274 PPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQRV 333

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                 +  A++  ++    E   I    + + + + K +        
Sbjct: 334 REMTLNDGHTFVTLDQIRSEFAKILKLIMSVYEDFDITDYSFRLSLRDPKNVKKYYANDE 393

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 394 MWEKSQSM 401


>gi|330995385|ref|ZP_08319295.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329575880|gb|EGG57404.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 647

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 49/435 (11%), Positives = 110/435 (25%), Gaps = 31/435 (7%)

Query: 51  EYSDSLGKFLPDEDR-PNKGV--FSLQDDDGQWISLR---YDLTAPLARYVAENFDTIVF 104
           EY   L +    + R   K +  F   +  G+   L       TA   R   E+F   + 
Sbjct: 231 EYLTLLEEAKKRDHRKIGKEMELFMFSERVGK--GLPMWLPKGTA--LRLRLEDFLKKIQ 286

Query: 105 PCRTYRIGPVFR----NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
               Y+          N     G +  + +     + +     +  +  M       +  
Sbjct: 287 KRYGYQQVMTPHIGGKNLYVTSGHYAHYGKDSFQPIHTPEADEEYMLKPMNCPHHCEIYA 346

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRT 220
            +   +  +  R    G + +    G+     R+      D         VK        
Sbjct: 347 WKPRSYKDLPLRIAEFGTVYRYEQSGELHGLTRVRSFTQDDAHIFCRPDQVKDEFIRVM- 405

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
                   GA L  +  +  +S    +  +      E+ +                   +
Sbjct: 406 -EIIQIIFGA-LNFDTFEAQISLRDPNNREKYIGSDEVWEEAENA--IIEACKEKGLNAK 461

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                +         +             I     + E+ K    G             +
Sbjct: 462 VEYGEAAFYGPKLDFMVKDALGRRWQLGTIQVDYNLPERFKLEYTGEDN---------QK 512

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F        V ++              V I  +                 
Sbjct: 513 HRPVMIHRAPFGSMERFCAVLIEHTAGHFPLWLTPDQVAILPIS--EKFNDYAHKLCAYF 570

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
               +RA +    ++  G +++  + +  P  +I G  E + G + ++   +G + S + 
Sbjct: 571 DERDVRAIVD-DRNEKIGRKIRDNEMKRIPYMLIVGEKEAADGTVSVRKQGEGDQGSMKF 629

Query: 461 KNNESWREARVAQIT 475
           ++        V  +T
Sbjct: 630 EDFAKKINEEVRNMT 644



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL 50
           +G      K   +R R+ D ++ I + YG+  + TP +
Sbjct: 262 KGLPMWLPKGTALRLRLEDFLKKIQKRYGYQQVMTPHI 299


>gi|324119204|gb|EGC13092.1| threonyl-tRNA synthetase [Escherichia coli E1167]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|315641145|ref|ZP_07896224.1| threonine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483153|gb|EFU73670.1| threonine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 650

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/368 (10%), Positives = 93/368 (25%), Gaps = 17/368 (4%)

Query: 89  APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
           A + R +               +      + +       +     D            + 
Sbjct: 270 ATIRRIIERYIVDKEVSLGYMHVYTPIMADVNLYKTSGHWDHYHEDMFPPMDMGDGEMLV 329

Query: 149 MMMADTLEAVGIKRNDYHIG--INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +   +    + + +ND H    +  R    G++ +    G     +R+  +   D     
Sbjct: 330 LRPMNCPHHIMVYKNDIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFV 389

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
               +K    +   D      K   +  +    +      + +K   +           +
Sbjct: 390 RPDQIKEEF-KRTLDLMTAVYKDFGI-DDYRFRLSYRDPNNTDKYFDDDKMWENAQKMIK 447

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
              +EL    +     G  +            L+               +          
Sbjct: 448 AAMDEL--GLDYFEAEGEAA-------FYGPKLDVQVKTALGMEETLSTIQLDFLLPERF 498

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
            +   G       R    +             +   +  + +         V I  +  D
Sbjct: 499 ELTYVGEDGENSHRPVMIHRGIVSTMERFVAYLT--EVYKGAFPTWLAPVQVEIIPVSVD 556

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           + S        + L   GIRAE+  G ++  G +++ A  +  P  ++ G  E +   + 
Sbjct: 557 AHS-EYAYEVKERLLEKGIRAEVD-GRNEKMGYKIRAAQTQKIPYQLVVGDQEMNDATVN 614

Query: 447 IKDLAKGK 454
           I+     +
Sbjct: 615 IRRYGSKE 622



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 2/78 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   +   K     D  ++ +F 
Sbjct: 260 SGLPFWLPKGATIRRIIERYIVDKEVSLGYMHVYTPIMADVNLY-KTSGHWDHYHEDMFP 318

Query: 73  LQDDD-GQWISLRYDLTA 89
             D   G+ + LR     
Sbjct: 319 PMDMGDGEMLVLRPMNCP 336


>gi|307298932|ref|ZP_07578734.1| threonyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915357|gb|EFN45742.1| threonyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 648

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  ++ +          +     L++ G R E+     K+   +++ A     P  I
Sbjct: 542 WLAPTQVSVIPIADRHAEYAESVAAELKSRGFRVEVD-DRQKSTNYKIREAQLMKVPYMI 600

Query: 434 IQGTGERSRGMLQIK 448
           I G  E+  G + ++
Sbjct: 601 IVGDREKEDGTISVR 615



 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   + N++L   R  +   G+  + TP +  SD+L +     D     ++  
Sbjct: 269 GMPVFLPKGTEMLNQLLQFSREKHVEDGYREVSTPQI-MSDALWRTSGHWDHYRDNMY-F 326

Query: 74  QDDDGQWISLRYDLTAP 90
            + + Q  +++      
Sbjct: 327 TEKEDQQFAVKPMNCPG 343


>gi|302533417|ref|ZP_07285759.1| threonyl-tRNA synthetase [Streptomyces sp. C]
 gi|302442312|gb|EFL14128.1| threonyl-tRNA synthetase [Streptomyces sp. C]
          Length = 658

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 6/131 (4%)

Query: 347 PATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
               F        V L+    +    +  +  V I   D   + L ++    +     G+
Sbjct: 531 HRALFGSIERFFAVLLEHYAGAMPPWLAPVQAVGIPIGDGHVEYLQEFAAAAKK---QGL 587

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           R E+   S +    +++   +   P  II G  + + G +  +    G + +   K+   
Sbjct: 588 RVEVDASSDR-MQKKIRNHQKLKVPFMIIVGDEDMAAGTVSFRY-RDGSQENGIPKDEAL 645

Query: 466 WREARVAQITI 476
            + A+V    +
Sbjct: 646 AKLAKVVADRV 656


>gi|171318442|ref|ZP_02907597.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171096356|gb|EDT41258.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R    + G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370


>gi|170701132|ref|ZP_02892106.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170133954|gb|EDT02308.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R    + G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370


>gi|254252558|ref|ZP_04945876.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895167|gb|EAY69047.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R    + G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/118 (12%), Positives = 38/118 (32%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    +  +   +        + R +  L    +    +  + P+    ++      
Sbjct: 493 GAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVW-LAPIQAVVLNIAESQA 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q   Q L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 552 EYAQSLAQTLQKQGVRVTADL-RNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVR 608


>gi|172060451|ref|YP_001808103.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|238689138|sp|B1YP13|SYT_BURA4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171992968|gb|ACB63887.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R    + G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370


>gi|30249296|ref|NP_841366.1| prolyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|81838727|sp|Q82UZ8|SYP_NITEU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|30180615|emb|CAD85228.1| Prolyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 568

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 4/103 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +RI ++I   IR    N G   +  P +  ++ L +     D     +  
Sbjct: 37  SGLYTWMPLGLRILHKIEHIIREEMNNSGALELLMPAVHPAE-LWQETGRWDVFGPQMLK 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +QD             ++   +AR   +++  +       +  
Sbjct: 96  IQDRHKHDFCFGPTHEEVIVDIARREIKSYRQLPINFYQIQTK 138


>gi|115351412|ref|YP_773251.1| threonyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122323391|sp|Q0BG06|SYT_BURCM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115281400|gb|ABI86917.1| Ser-tRNA(Thr) hydrolase [Burkholderia ambifaria AMMD]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R    + G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370


>gi|134295547|ref|YP_001119282.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166223329|sp|A4JDU4|SYT_BURVG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|134138704|gb|ABO54447.1| Ser-tRNA(Thr) hydrolase [Burkholderia vietnamiensis G4]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R    + G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 38.3 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 33/349 (9%), Positives = 88/349 (25%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPKGWALWQQVEQYMRRRVNDAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY I   N      + +       D                   L G+ + +     D
Sbjct: 323 KRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F       +E I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEDQFIAESIAFNTLAMSVYKDFGFEHIDIKLSLRPEQRAGTDETWDRAEQGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
               +  +        G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 DALTACGLTWQELPGEGAFYGPKIEYHIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +    +       I  ++         Q   Q 
Sbjct: 502 SRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPFQAI-VLNIAESQAEYAQSLAQT 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGVRVAADL-RNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVR 608


>gi|257869188|ref|ZP_05648841.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803352|gb|EEV32174.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 646

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 9/106 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +   + G+  + TP++   D   K     D  ++ +F  
Sbjct: 262 GLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMANVDLY-KTSGHWDHYHEDMFPP 320

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            D   G+ + LR             +         +YR  P+   E
Sbjct: 321 MDMGDGEMLVLRPMNCP-------HHMMVYKNDIHSYRELPIRIAE 359


>gi|255513918|gb|EET90183.1| glycyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 500

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 2/86 (2%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +  +  D   ++K      +L++ GI    +  +S + G +   AD    P+AI    
Sbjct: 416 YALFPLQKDDKIIAKSVEIGNLLKSKGIYP--YYSASGSIGKRYAKADEVGIPMAITVDY 473

Query: 438 GERSRGMLQIKDLAKGKELSREIKNN 463
                G + I+    G +   + ++ 
Sbjct: 474 DTLENGTVTIRKALDGSQTRVKFEDI 499


>gi|217034632|ref|ZP_03440039.1| hypothetical protein HP9810_881g25 [Helicobacter pylori 98-10]
 gi|216942927|gb|EEC22414.1| hypothetical protein HP9810_881g25 [Helicobacter pylori 98-10]
          Length = 612

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I++  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRNREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATSALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEHNHAE 480


>gi|91785266|ref|YP_560472.1| prolyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123358448|sp|Q13U19|SYP_BURXL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|91689220|gb|ABE32420.1| Prolyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 578

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEKYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQSDFVIGPTHEEVVTDIARNQIKSYRQLPVNFYQVQTK 138


>gi|28869801|ref|NP_792420.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28853046|gb|AAO56115.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 193

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 8/128 (6%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARY 94
            I+   G +    P L   D+  +     +     +++  D  G+   L  + TA     
Sbjct: 9   AIFIAAGAEEAIVPALWGQDTFIEKAGGSEIIG-QMWAFNDKAGRACCLIPEATA----L 63

Query: 95  VAEN---FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
             E              + +   +R E+   GR+R+F Q  ++ +G S + +      + 
Sbjct: 64  FQERSELLLNGRCEALFFYVARCYRYERPQAGRYREFTQLGLEILGHSPQQSLLRSQAIC 123

Query: 152 ADTLEAVG 159
              L+ +G
Sbjct: 124 TGFLDFLG 131


>gi|295111615|emb|CBL28365.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Synergistetes
           bacterium SGP1]
          Length = 633

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +       +  +   + L + G+R E      +  G +++ A  +  P  I
Sbjct: 533 WIAPVQAELIPISEAHRAYAEELRKELMSWGVRTETD-SRDEKLGKRIRDAQLQKVPYMI 591

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  ER    + +++  KG   S  ++  +    A   
Sbjct: 592 VIGDKERDERQVAVRERTKGDLGSMSLEAFQKLLSAEFN 630



 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + + N ++D  R  +   G+  + TP +   +   +     D   + ++  
Sbjct: 259 GFPFFHPKGMVVMNTLIDFWRREHVRRGYQEVRTPQILDRELWLRS-GHWDHYRENMY-F 316

Query: 74  QDDDGQWISLRYDLTAP 90
            + D +  +++      
Sbjct: 317 TEIDEKPFAIKPMNCPG 333


>gi|262047409|ref|ZP_06020366.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260572383|gb|EEX28946.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 644

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 3/138 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN-IKEMGPVLITTMDHDSDSLS 391
            Y G         +   G    + R I  L  +             V I  ++ D+    
Sbjct: 500 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQVEIIPVNLDAHG-E 558

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +   Q L   G RAE+    ++  G +++ +  +  P  ++ G  E   G + ++   
Sbjct: 559 YAEKVRQELAKRGFRAEVD-TRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYG 617

Query: 452 KGKELSREIKNNESWREA 469
             +E+S+ + +  +  +A
Sbjct: 618 TDEEISKSLTDFINEIDA 635



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYRDDMF 316

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 317 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 376

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                +T  A++  ++ D  +   I    + +   + K  D       
Sbjct: 377 REMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDE 436

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 437 MWERSQKM 444


>gi|206559848|ref|YP_002230612.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693072|sp|B4E7I6|SYT_BURCJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|198035889|emb|CAR51780.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 37.9 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/118 (12%), Positives = 37/118 (31%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    +  +   +        + R +  L    +    +  + P     ++      
Sbjct: 493 GAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVW-LAPYQAIVLNIAESQA 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q   Q L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 552 EYAQSLAQSLQKQGVRVAADL-RNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVR 608


>gi|9955215|pdb|1EVK|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With The Ligand Threonine
 gi|9955216|pdb|1EVK|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With The Ligand Threonine
 gi|9955217|pdb|1EVL|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|9955218|pdb|1EVL|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|9955219|pdb|1EVL|C Chain C, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|9955220|pdb|1EVL|D Chain D, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase With A Threonyl Adenylate Analog
 gi|12084202|pdb|1FYF|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase Complexed With A Seryl Adenylate Analog
 gi|12084203|pdb|1FYF|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna
           Synthetase Complexed With A Seryl Adenylate Analog
 gi|20664135|pdb|1KOG|A Chain A, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664136|pdb|1KOG|B Chain B, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664137|pdb|1KOG|C Chain C, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664138|pdb|1KOG|D Chain D, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664139|pdb|1KOG|E Chain E, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664140|pdb|1KOG|F Chain F, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664141|pdb|1KOG|G Chain G, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
 gi|20664142|pdb|1KOG|H Chain H, Crystal Structure Of E. Coli Threonyl-Trna Synthetase
           Interacting With The Essential Domain Of Its Mrna
           Operator
          Length = 401

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 56  FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 115

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 116 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 174

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 175 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 234

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 235 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 293

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 294 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 352

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 353 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 400



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 15  MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 72

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 73  KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 130


>gi|302024085|ref|ZP_07249296.1| threonyl-tRNA synthetase [Streptococcus suis 05HAS68]
 gi|330832440|ref|YP_004401265.1| threonyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306663|gb|AEB81079.1| threonyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 649

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/380 (9%), Positives = 106/380 (27%), Gaps = 16/380 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +      +    D+       +  +  +  M       V 
Sbjct: 284 KELTSGYQHVYTPPLASVELYKTSGHWEHYSEDMFPTMDMGDGEEFVLRPMNCPHHIQVY 343

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++    +  
Sbjct: 344 KNHVRSYRELPVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKAL 403

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   + ++  ++  E+ +      KG  +  +  +  
Sbjct: 404 QLIIDVY---ADFNLNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMD-EMGVDYF 459

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F        P  FG    G        
Sbjct: 460 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFL------LPERFGLTYIGAD----GE 509

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +     S       + +++ + +         V +  +  ++  L       + 
Sbjct: 510 EHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPTQVTMIPISVEA-HLDYAWKVAKE 568

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L+  G+R  +    ++    +++ +     P  +I G  E     + ++        ++ 
Sbjct: 569 LQDRGVRVHVD-ERNEKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQS 627

Query: 460 IKNNESWREARVAQITIPIS 479
           +        A +A+ + P  
Sbjct: 628 VAEFVDHILADIARKSRPAE 647



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/186 (10%), Positives = 47/186 (25%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     +  ++ +F  
Sbjct: 262 GLPFWLPNGATIRRTLERYITDKELTSGYQHVYTPPLASVELY-KTSGHWEHYSEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA---PL----ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            D   G+   LR         +     R   E    I      +R             R 
Sbjct: 321 MDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPVRIAELGMMHRYEKSGALTGLQRVRE 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +    +   ++ D      +    + +   + +  +   +   + 
Sbjct: 381 MTLNDGHIFVTPEQIQEEFKKALQLIIDVYADFNLNDYRFRLSYRDPEDKEKYYDNDEMW 440

Query: 186 GDDKLN 191
            + +  
Sbjct: 441 ENAQRM 446


>gi|239637623|ref|ZP_04678595.1| glycyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596841|gb|EEQ79366.1| glycyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 463

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/218 (9%), Positives = 53/218 (24%), Gaps = 5/218 (2%)

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYN--SNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           + +K     E+        ++ +            K            +   ++      
Sbjct: 248 QWLKDLNISEENMRLRDHDADELSHYSNATTDIEYKFPFGWGELWGIASRTDFDLKKHSE 307

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
              E  K     +      Y    S    +   A          +   K   +       
Sbjct: 308 HSGEDFKYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYSQEGVEGSKDERTVLKFHPA 367

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
           + P     +       S+     + L +      +    S++ G + +  D    P  I 
Sbjct: 368 LAPYKAAILPLSKKLSSEAIKIFEQL-SQSFS--IDFDESQSIGKRYRRQDEIGTPYCIT 424

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                     + ++D    +++   I   E++   +V 
Sbjct: 425 FDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLAEKVK 462


>gi|56413681|ref|YP_150756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362604|ref|YP_002142241.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|73919824|sp|Q5PH96|SYT_SALPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689908|sp|B5BA42|SYT_SALPK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56127938|gb|AAV77444.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094081|emb|CAR59581.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVIIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 632



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 425 DKRIGSDEMWDRAEADLAVALEENN 449


>gi|325528727|gb|EGD05797.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 41.7 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 38/118 (32%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    +  +   +        + R +  L    +       + P+ +  M+      
Sbjct: 493 GAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMP-AWLAPIQVVVMNIAESQA 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q   Q L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 552 DYAQSLAQTLQKQGVRVTADL-RNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVR 608


>gi|259503119|ref|ZP_05746021.1| proline-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259168985|gb|EEW53480.1| proline-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 578

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 1/85 (1%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M ++     ++  G         R+  ++   I+   E  G   +ETP +  +D L +  
Sbjct: 25  MMERAGYIYQISAGVWAYLPLAYRVIRKVKGIIQEEMEKAGAYEMETPSMLPAD-LWRQT 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              +     ++  +D + +   L  
Sbjct: 84  GRYEAYGDTLYKFKDHNDREYILGP 108



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 26/153 (16%)

Query: 345 NVPATGFSIGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           ++    + IG++R++ A+    +        ++I      +I       + ++      Q
Sbjct: 438 DMIMGCYGIGVTRMLSAVAEQNADENGLVWPDSIAPFDVHVIPVNAKKDEQMAMANELEQ 497

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L  AG    +     +  G +   +D    PL +  G    + G++++K    G+    
Sbjct: 498 QLTAAGYEVLVDDRKERA-GVKFADSDLIGIPLRVTVGKK-AADGIVEVKIRKTGE---- 551

Query: 459 EIKNNESWREARVAQITIPISELVSTVKKILQE 491
                          + +   ELV+TV  +L++
Sbjct: 552 --------------TLEVKQEELVNTVGILLKQ 570


>gi|254579094|ref|XP_002495533.1| ZYRO0B13596p [Zygosaccharomyces rouxii]
 gi|238938423|emb|CAR26600.1| ZYRO0B13596p [Zygosaccharomyces rouxii]
          Length = 454

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 53/448 (11%), Positives = 109/448 (24%), Gaps = 81/448 (18%)

Query: 18  CPTKEIRIRNRILD--SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ- 74
                 +I N+++    ++  ++ YGF  + TPL+ Y  SL +     D   + +F ++ 
Sbjct: 56  FLPNGTKIFNKLIQFMKLQQQFK-YGFKEVVTPLI-YRKSLWEQSGHWDNYKEDMFRVEG 113

Query: 75  -DDDGQWISLRYDLTAPLA-------RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            D   +   L+               R  +E       P R     P+ RNE  G     
Sbjct: 114 HDTSKEEYGLKPMNCPGHCMVFKRFDRSYSE------LPLRLSDFSPLHRNEASGALSGL 167

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
             ++               ++   +A  L+ V     D           +   E   L  
Sbjct: 168 TRVRK-FHQDDGHIFCTPDQVESEIAKCLKLV-----DMCYTKVFPLSPELANEVYTLEL 221

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             +    +  ++  D  +      +         + +     G  +  +  D    +  +
Sbjct: 222 STRPEHFIGDVKVWDYAETVLKNILNKFGKPWELNEADGAFYGPKIDIKVTDHTGKYHQV 281

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              +   +L E                              + K      +        V
Sbjct: 282 ATIQLDFQLPERF--------------------------DLKYKDRDNTYKRPIMIHRAV 315

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           + ++  F  +        +       +     +     N    G       L + L+   
Sbjct: 316 FGSVERFMAILIDSNHGKWPFWLNPRQ-----AMIIPVNTKRQGQVDACKDLFLKLRGQG 370

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +  +             D D                                   K A  
Sbjct: 371 NENSTDPIPLNSFHFNADLDERPEPVGYRI-------------------------KDALM 405

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           +N    II G  E   G   I+     +
Sbjct: 406 KNYSYLIIIGDKEVETGRYAIRTREDRQ 433


>gi|221197733|ref|ZP_03570779.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221204709|ref|ZP_03577726.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221175566|gb|EEE07996.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221181665|gb|EEE14066.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 40.2 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 39/118 (33%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    +  +   +        + R +  L    +    +  + PV    ++     +
Sbjct: 493 GAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVW-LAPVQAVVLNIAESQV 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q   Q L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 552 EYAQSLAQTLQKQGVRVTADL-RNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVR 608


>gi|221214904|ref|ZP_03587872.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221165131|gb|EED97609.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 40.2 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 34/349 (9%), Positives = 91/349 (26%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPKGWALWQQVEQYMRRRVNEAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY I   N      + +       D                   L G+ + +     D
Sbjct: 323 KRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F       +E I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEHIDIKLSLRPEQRAGTDETWDRAEQGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
               +  +        G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 DALTACGLSWEELPGEGAFYGPKIEYHIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +    +  + PV    ++     +   Q   Q 
Sbjct: 502 SRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVW-LAPVQAVVLNIAESQVEYAQSLAQT 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGVRVTADL-RNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVR 608


>gi|170768863|ref|ZP_02903316.1| threonyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170122411|gb|EDS91342.1| threonyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|167587363|ref|ZP_02379751.1| threonyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 37.5 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    +  +   +        + R +  L    +    +       I  ++      
Sbjct: 493 GAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPFQAI-VLNIAESQA 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q   Q L+  G+RA   L  ++    +++       P  ++ G  ER    + ++
Sbjct: 552 EYAQSLAQTLQKQGVRAAADL-RNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVR 608


>gi|169236481|ref|YP_001689681.1| threonyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|73921305|sp|Q9HP27|SYT_HALSA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229470722|sp|B0R6G6|SYT_HALS3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167727547|emb|CAP14335.1| threonine--tRNA ligase [Halobacterium salinarum R1]
          Length = 640

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 68/241 (28%), Gaps = 11/241 (4%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + I  ++    +D E ++    E   G+    +       + E++ + G +     +   
Sbjct: 402 DTITEVLDTFDLDYEVALATRPEKSVGSDDIWEQSER--QLREVLDQQGVD---YDVEPG 456

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-NVPATGFSI 353
                       +E  LG        +            Y G  +       +    +  
Sbjct: 457 DGAFYGPKIDFGFEDALGRSWDGPTVQLDFNMPDRFDLEYTGSDNDAHQPVMIHRALYGS 516

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                +V ++              V I  +    D+L         L     R E+    
Sbjct: 517 YERFFMVLIEHYNGRFPTWLAPEQVRILPV--TDDNLGYAHRVKNEL--GDYRVEVE-DR 571

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               G +++ A   N P  ++ G  E     + ++D  + +    ++    +  ++ V  
Sbjct: 572 DWTVGKKIQQAHDDNVPYMLVVGDDEEDADAVSVRDRQEREGKGVDLAEFRAHLDSEVDG 631

Query: 474 I 474
            
Sbjct: 632 K 632



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   + + +R +    G+D +ETP L  ++ L K     D     +F L
Sbjct: 262 GLPLYHPNGKTVLRELSEYVRGLNSEMGYDEVETPHLFRTE-LWKQSGHYDNYVDDMF-L 319

Query: 74  QDDDGQWISLRYDLTAPLA 92
            D + +   L+       A
Sbjct: 320 LDVNDEEYGLKPMNCPGHA 338


>gi|73748565|ref|YP_307804.1| threonyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|289432591|ref|YP_003462464.1| threonyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|123732511|sp|Q3ZXB5|SYT_DEHSC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73660281|emb|CAI82888.1| threonyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|288946311|gb|ADC74008.1| threonyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 582

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 78/257 (30%), Gaps = 13/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +       +R+ I +  +  +   G+D + TP +   D L K         + ++S 
Sbjct: 205 GLVNWLPNGAIVRHLIEEFWKKEHLKRGYDLVYTPHIAKVD-LWKTSGHWGFYRENMYSP 263

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D DG+   L+             +        R+Y+  P+   E     R+ +      
Sbjct: 264 MDIDGEEYVLKPMN-------CVYHILMFKNRTRSYKELPIRMAELGTVYRYERSGVLH- 315

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                   T D      + D LE   +K  D    + +          +    +  + E 
Sbjct: 316 GLSRVRGFTQDDAHIFCLYDQLEKEVVKVLDLAKFMIDTFGFTKYKVMLSTRPEKYVGEL 375

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                A D L     + ++      + D       G  +  +  D +         +   
Sbjct: 376 DKWEYATDILA----KALEANQIPYQVDPGEGVFYGPKIDIKFEDALGRTWQGPTIQVDF 431

Query: 254 ELYELVKGTIAGEKGFN 270
           +L E    ++ GE G +
Sbjct: 432 QLPERFDVSVVGEDGKD 448



 Score = 37.1 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 7/56 (12%), Positives = 19/56 (33%), Gaps = 1/56 (1%)

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              +++ A     P  ++ G  E     + ++    G +        +S   A++ 
Sbjct: 522 MNQKIRQAQLAKIPYMLVVGDKEIETQSVAVRT-RTGSQQVMPFAEFKSMLLAKIK 576


>gi|16129675|ref|NP_416234.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24112885|ref|NP_707395.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|26247970|ref|NP_754010.1| threonyl-tRNA synthetase [Escherichia coli CFT073]
 gi|30063014|ref|NP_837185.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|74311961|ref|YP_310380.1| threonyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|89108559|ref|AP_002339.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|91210933|ref|YP_540919.1| threonyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110641840|ref|YP_669570.1| threonyl-tRNA synthetase [Escherichia coli 536]
 gi|110805471|ref|YP_688991.1| threonyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|117623893|ref|YP_852806.1| threonyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|170081377|ref|YP_001730697.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170680212|ref|YP_001743530.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188492265|ref|ZP_02999535.1| threonyl-tRNA synthetase [Escherichia coli 53638]
 gi|191171752|ref|ZP_03033299.1| threonyl-tRNA synthetase [Escherichia coli F11]
 gi|194435142|ref|ZP_03067376.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194438580|ref|ZP_03070669.1| threonyl-tRNA synthetase [Escherichia coli 101-1]
 gi|215486938|ref|YP_002329369.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218558588|ref|YP_002391501.1| threonyl-tRNA synthetase [Escherichia coli S88]
 gi|218689663|ref|YP_002397875.1| threonyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218699714|ref|YP_002407343.1| threonyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218705218|ref|YP_002412737.1| threonyl-tRNA synthetase [Escherichia coli UMN026]
 gi|237705668|ref|ZP_04536149.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|238900934|ref|YP_002926730.1| threonyl-tRNA synthetase [Escherichia coli BW2952]
 gi|253773326|ref|YP_003036157.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161779|ref|YP_003044887.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256022617|ref|ZP_05436482.1| threonyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|293405218|ref|ZP_06649210.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293410035|ref|ZP_06653611.1| threonyl-tRNA synthetase [Escherichia coli B354]
 gi|293415037|ref|ZP_06657680.1| threonyl-tRNA synthetase [Escherichia coli B185]
 gi|297517244|ref|ZP_06935630.1| threonyl-tRNA synthetase [Escherichia coli OP50]
 gi|298380861|ref|ZP_06990460.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300938947|ref|ZP_07153648.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300987614|ref|ZP_07178286.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300994418|ref|ZP_07180923.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301017728|ref|ZP_07182383.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301025270|ref|ZP_07188835.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|306815028|ref|ZP_07449184.1| threonyl-tRNA synthetase [Escherichia coli NC101]
 gi|307138378|ref|ZP_07497734.1| threonyl-tRNA synthetase [Escherichia coli H736]
 gi|312966921|ref|ZP_07781139.1| threonyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|331642316|ref|ZP_08343451.1| threonine--tRNA ligase [Escherichia coli H736]
 gi|331653119|ref|ZP_08354124.1| threonine--tRNA ligase [Escherichia coli M718]
 gi|67473036|sp|P0A8M3|SYT_ECOLI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|67473037|sp|P0A8M4|SYT_ECOL6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|67473038|sp|P0A8M5|SYT_SHIFL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122957455|sp|Q0T4S9|SYT_SHIF8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123084457|sp|Q1RB76|SYT_ECOUT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123343967|sp|Q0THB0|SYT_ECOL5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123732358|sp|Q3Z267|SYT_SHISS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223339|sp|A1ABQ2|SYT_ECOK1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701400|sp|B7MAS9|SYT_ECO45 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701401|sp|B7NT58|SYT_ECO7I RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701403|sp|B7N556|SYT_ECOLU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701404|sp|B1LE12|SYT_ECOSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229557979|sp|B1XGI1|SYT_ECODH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783521|sp|B7USA2|SYT_ECO27 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783523|sp|B7MVJ7|SYT_ECO81 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516437|sp|C4ZYI1|SYT_ECOBW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|5107656|pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed
           With Its Cognate Trna
 gi|26108373|gb|AAN80575.1|AE016761_150 Threonyl-tRNA synthetase [Escherichia coli CFT073]
 gi|1742811|dbj|BAA15498.1| threonyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|1788013|gb|AAC74789.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24051829|gb|AAN43102.1| threonine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30041263|gb|AAP16992.1| threonine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|73855438|gb|AAZ88145.1| threonine tRNA synthetase [Shigella sonnei Ss046]
 gi|91072507|gb|ABE07388.1| threonyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110343432|gb|ABG69669.1| threonyl-tRNA synthetase [Escherichia coli 536]
 gi|110615019|gb|ABF03686.1| threonine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|115513017|gb|ABJ01092.1| threonine tRNA synthetase [Escherichia coli APEC O1]
 gi|169889212|gb|ACB02919.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170517930|gb|ACB16108.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|188487464|gb|EDU62567.1| threonyl-tRNA synthetase [Escherichia coli 53638]
 gi|190908082|gb|EDV67674.1| threonyl-tRNA synthetase [Escherichia coli F11]
 gi|194416606|gb|EDX32741.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194422590|gb|EDX38588.1| threonyl-tRNA synthetase [Escherichia coli 101-1]
 gi|215265010|emb|CAS09396.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218365357|emb|CAR03078.1| threonyl-tRNA synthetase [Escherichia coli S88]
 gi|218369700|emb|CAR17469.1| threonyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218427227|emb|CAR08113.2| threonyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218432315|emb|CAR13205.1| threonyl-tRNA synthetase [Escherichia coli UMN026]
 gi|222033474|emb|CAP76215.1| Threonyl-tRNA synthetase [Escherichia coli LF82]
 gi|226900425|gb|EEH86684.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|238863657|gb|ACR65655.1| threonyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242377442|emb|CAQ32194.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324370|gb|ACT28972.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253973680|gb|ACT39351.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253977874|gb|ACT43544.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|260449158|gb|ACX39580.1| threonyl-tRNA synthetase [Escherichia coli DH1]
 gi|281600917|gb|ADA73901.1| Threonyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|284921639|emb|CBG34711.1| threonyl-tRNA synthetase [Escherichia coli 042]
 gi|291427426|gb|EFF00453.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291432685|gb|EFF05664.1| threonyl-tRNA synthetase [Escherichia coli B185]
 gi|291470503|gb|EFF12987.1| threonyl-tRNA synthetase [Escherichia coli B354]
 gi|294493274|gb|ADE92030.1| threonyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|298278303|gb|EFI19817.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299880135|gb|EFI88346.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300306094|gb|EFJ60614.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300400020|gb|EFJ83558.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300406264|gb|EFJ89802.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300456146|gb|EFK19639.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|305851676|gb|EFM52129.1| threonyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553740|gb|ADN46515.1| threonine tRNA synthetase [Escherichia coli ABU 83972]
 gi|307626794|gb|ADN71098.1| threonyl-tRNA synthetase [Escherichia coli UM146]
 gi|309701942|emb|CBJ01255.1| threonyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|312288385|gb|EFR16287.1| threonyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|315136359|dbj|BAJ43518.1| threonyl-tRNA synthetase [Escherichia coli DH1]
 gi|315286432|gb|EFU45867.1| threonyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315290480|gb|EFU49854.1| threonyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|320181253|gb|EFW56172.1| Threonyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320194570|gb|EFW69201.1| Threonyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|323937321|gb|EGB33600.1| threonyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940615|gb|EGB36806.1| threonyl-tRNA synthetase [Escherichia coli E482]
 gi|323952226|gb|EGB48099.1| threonyl-tRNA synthetase [Escherichia coli H252]
 gi|323956620|gb|EGB52358.1| threonyl-tRNA synthetase [Escherichia coli H263]
 gi|323962102|gb|EGB57698.1| threonyl-tRNA synthetase [Escherichia coli H489]
 gi|323973902|gb|EGB69074.1| threonyl-tRNA synthetase [Escherichia coli TA007]
 gi|323978098|gb|EGB73184.1| threonyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324011501|gb|EGB80720.1| threonyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331039114|gb|EGI11334.1| threonine--tRNA ligase [Escherichia coli H736]
 gi|331049217|gb|EGI21289.1| threonine--tRNA ligase [Escherichia coli M718]
 gi|332758628|gb|EGJ88947.1| threonyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|333003769|gb|EGK23305.1| threonyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333004377|gb|EGK23908.1| threonyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333006570|gb|EGK26070.1| threonyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333018789|gb|EGK38082.1| threonyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|329961279|ref|ZP_08299445.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328531944|gb|EGF58761.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 646

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 53/460 (11%), Positives = 112/460 (24%), Gaps = 82/460 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ D +R I   Y +  +  P                  NK ++ 
Sbjct: 261 KGLPMWLPKGTALRIRLQDFLRRIQSRYDYQEVMCP---------------PIGNKLLY- 304

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                  G   +  K          + +
Sbjct: 305 ------------------------------------ITSGHYAKYGKDSFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      + + +             R    G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCMIYKNSPRSYKDL-----------PLRLAEFGTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK          S  F   A    E    +   ++ D     
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMAFENFEAQISLRDKVNRDKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DENWEKAEQAIIEACEEKGLKAKVEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   + +              D    R    +    G    + R +  L    +    
Sbjct: 495 NLPERFQLEYTGA----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 541

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +              Q+L+   IRA +    ++  G +++  + +  P 
Sbjct: 542 LW-LTPDQVAILPISEKFNDYALEVKQLLKQYDIRALVD-ERNEKIGRKIRDNEMKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            ++ G  E     + ++   +G + + +I+         V
Sbjct: 600 MLVVGEKEAENKEIAVRKQGEGDQGTMKIEEFAKKVSEEV 639


>gi|229530020|ref|ZP_04419410.1| prolyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229333794|gb|EEN99280.1| prolyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 571

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 45/130 (34%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++    L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFQ-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHERPFVLSPTAEEVITALVRNEVSSYKQLP--LNLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 481 MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+  +G++ +  +++   + +A++A
Sbjct: 540 DEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 571


>gi|123434302|ref|XP_001308783.1| Anticodon binding domain containing protein [Trichomonas vaginalis
           G3]
 gi|121890480|gb|EAX95853.1| Anticodon binding domain containing protein [Trichomonas vaginalis
           G3]
          Length = 513

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/375 (11%), Positives = 99/375 (26%), Gaps = 37/375 (9%)

Query: 84  RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ--CDVDNVGSSAE 141
           R DLT          F         +    +            + +   C       +  
Sbjct: 44  RADLT----------FHVPKSNFSDWYEELMVTAGIVDKRWDIKGMPIFCSYGYTMHNEI 93

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV--LRA 199
               E+                           + G   +   H D+          + +
Sbjct: 94  MHLFEVAYSKIGVPMTQFPAFIPRSFLEAEADHVKGFQSECFWHEDEMCLRPTSETAMYS 153

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
           +       ++ + +++ +       +      L   ++  +                E  
Sbjct: 154 MFAKWVKTIEDLPVMVQQSCNVYRYETKGTKPLI--RVREI-------------PWNEAH 198

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
                 ++  + L    ++V         I          + + G  +  +L   VM   
Sbjct: 199 TAHATPQEALDILGKFWDIVHDILTTKLSIDGLRLRRPDWDRFPGAEFTDVL-DVVMPCG 257

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVALKSLE-----SSTNNIK 373
           +     G+   G  +  +            T   +    L   L +            I 
Sbjct: 258 RVLQSVGAHYLGQHFSKVFKIQVDGEFSYMTCIGVSTRCLAAVLSAHGDDKGLIIPTIIA 317

Query: 374 EMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
            +  V++  +  D+D+L +K     + LR AGIR  +   ++++ G +  Y + +  PL 
Sbjct: 318 PIQVVIVPILRKDNDALLAKVAEMKKELRAAGIRVHIDDDTTRSPGEKFYYWEMKGVPLR 377

Query: 433 IIQGTGERSRGMLQI 447
           I  G  +  +    +
Sbjct: 378 IEVGPRDLEKNECVL 392


>gi|15790739|ref|NP_280563.1| threonyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|10581281|gb|AAG20043.1| threonyl-tRNA synthetase [Halobacterium sp. NRC-1]
          Length = 650

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 68/241 (28%), Gaps = 11/241 (4%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           + I  ++    +D E ++    E   G+    +       + E++ + G +     +   
Sbjct: 412 DTITEVLDTFDLDYEVALATRPEKSVGSDDIWEQSER--QLREVLDQQGVD---YDVEPG 466

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ-NVPATGFSI 353
                       +E  LG        +            Y G  +       +    +  
Sbjct: 467 DGAFYGPKIDFGFEDALGRSWDGPTVQLDFNMPDRFDLEYTGSDNDAHQPVMIHRALYGS 526

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                +V ++              V I  +    D+L         L     R E+    
Sbjct: 527 YERFFMVLIEHYNGRFPTWLAPEQVRILPV--TDDNLGYAHRVKNEL--GDYRVEVE-DR 581

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               G +++ A   N P  ++ G  E     + ++D  + +    ++    +  ++ V  
Sbjct: 582 DWTVGKKIQQAHDDNVPYMLVVGDDEEDADAVSVRDRQEREGKGVDLAEFRAHLDSEVDG 641

Query: 474 I 474
            
Sbjct: 642 K 642



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   + + +R +    G+D +ETP L  ++ L K     D     +F L
Sbjct: 272 GLPLYHPNGKTVLRELSEYVRGLNSEMGYDEVETPHLFRTE-LWKQSGHYDNYVDDMF-L 329

Query: 74  QDDDGQWISLRYDLTAPLA 92
            D + +   L+       A
Sbjct: 330 LDVNDEEYGLKPMNCPGHA 348


>gi|70725135|ref|YP_252049.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|68445859|dbj|BAE03443.1| threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) [Staphylococcus
           haemolyticus JCSC1435]
          Length = 638

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/342 (10%), Positives = 99/342 (28%), Gaps = 12/342 (3%)

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
                N          + +     + +     ++       + +    +  NDY +   N
Sbjct: 274 RNQMENFLREVQLKHDYDEVRTPLMMNKRLWEESGHWDHYHENMYFTKVDENDYALKPMN 333

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
                 I +       D         +         L G+  +      D++  F   + 
Sbjct: 334 CPGHMLIFKNELRSYKDLPLRIAEFGQVHRHEFSGALNGLLRVRT-FCQDDAHIFIMKSQ 392

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
           + SE  +I+     I          EL   +   +    EL + +E  +   +  + + +
Sbjct: 393 IKSEVQEILKLIDYIYSVFGFEYSIEL---STRPDDYLGELDLWNEAEQSLAHVLDDLGL 449

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-----DGLVSRFKGQNV 346
             +I  G   + G   +  +   +    Q   V        ++     +    + +   +
Sbjct: 450 DYSINEGDGAFYGPKIDVHIKDALNRSHQCATVQLDFQMPEKFELTYINEQNEKERPVVL 509

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        + ++  + +      M PV +  +    ++    +   + LR   IR
Sbjct: 510 HRAVFGSLDRFFGILIEHFKGAFPLW--MAPVQVNLIGVSDNNDGYVRTVAEALRDENIR 567

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             +     K  G +++ +        ++ G  E+    + ++
Sbjct: 568 VAIDDREEK-LGKKIRESQLNKISYTLVLGDDEQQHHTVSVR 608



 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 9/141 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G     +    IRN++ + +R +   + +D + TPL+     L +     D  ++ ++  
Sbjct: 262 GMPFYLSNGQFIRNQMENFLREVQLKHDYDEVRTPLMMNKR-LWEESGHWDHYHENMY-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D    +L+             +        R+Y+  P+   E     R       + 
Sbjct: 320 TKVDENDYALKPMNCPG-------HMLIFKNELRSYKDLPLRIAEFGQVHRHEFSGALNG 372

Query: 134 DNVGSSAETADAEMCMMMADT 154
                +    DA + +M +  
Sbjct: 373 LLRVRTFCQDDAHIFIMKSQI 393


>gi|18311410|ref|NP_563344.1| prolyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168206822|ref|ZP_02632827.1| prolyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168214717|ref|ZP_02640342.1| prolyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168217921|ref|ZP_02643546.1| prolyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182626988|ref|ZP_02954718.1| prolyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|81849146|sp|Q8XHQ4|SYP_CLOPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|18146094|dbj|BAB82134.1| proline-tRNA ligase [Clostridium perfringens str. 13]
 gi|170661763|gb|EDT14446.1| prolyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170713833|gb|EDT26015.1| prolyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177907658|gb|EDT70282.1| prolyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182380028|gb|EDT77507.1| prolyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 570

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +++   + + +R    N G        L  ++ L +     D     +F L
Sbjct: 38  GIYNYMPLGLKVIENVKNIVREEMNNAGAQEFLASALIPAE-LWQESGRWDAYGAEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D   +   L  
Sbjct: 97  KDRHNRDFCLGP 108


>gi|146304364|ref|YP_001191680.1| Ser-tRNA(Thr) hydrolase [Metallosphaera sedula DSM 5348]
 gi|145702614|gb|ABP95756.1| Ser-tRNA(Thr) hydrolase [Metallosphaera sedula DSM 5348]
          Length = 386

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 8/119 (6%)

Query: 349 TGFSIGISRLIVALKSLESSTNN---IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
               +G+    + LKS E  T           V I  +  + +     + + + L+  GI
Sbjct: 245 VRVDVGLLLYYILLKSREKQTPTLPLWLSPIHVRILKVRKEDNV----EDFAKSLKERGI 300

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           R ++     +  GN+++ A     P   I G  E   G L ++     ++    +   E
Sbjct: 301 RVQVD-DLEEGLGNKIRRAGMDWIPFVAIAGERELKTGNLTVRVRETSEQKPMTVDEIE 358


>gi|110801651|ref|YP_699687.1| prolyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123341520|sp|Q0SQC0|SYP_CLOPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110682152|gb|ABG85522.1| prolyl-tRNA synthetase [Clostridium perfringens SM101]
          Length = 570

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +++   + + +R    N G        L  ++ L +     D     +F L
Sbjct: 38  GIYNYMPLGLKVIENVKNIVREEMNNAGAQEFLASALIPAE-LWQESGRWDAYGAEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D   +   L  
Sbjct: 97  KDRHNRDFCLGP 108


>gi|110799310|ref|YP_697117.1| prolyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168211250|ref|ZP_02636875.1| prolyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|123049576|sp|Q0TMM3|SYP_CLOP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110673957|gb|ABG82944.1| prolyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170710790|gb|EDT22972.1| prolyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 570

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +++   + + +R    N G        L  ++ L +     D     +F L
Sbjct: 38  GIYNYMPLGLKVIENVKNIVREEMNNAGAQEFLASALIPAE-LWQESGRWDAYGAEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D   +   L  
Sbjct: 97  KDRHNRDFCLGP 108


>gi|43066|emb|CAA23560.1| unnamed protein product [Escherichia coli]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|307103976|gb|EFN52232.1| hypothetical protein CHLNCDRAFT_49107 [Chlorella variabilis]
          Length = 570

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 29/102 (28%), Gaps = 3/102 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        +  +              V+I  +              + LR+AG  
Sbjct: 423 HRAILGSAERMFAILTEHWGGKWPLWISPRQVMIVPIS--EAVYDYASAVRRQLRSAGFH 480

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +  + + +    +++ A        ++ G  ER  G + ++
Sbjct: 481 VDADM-ADRKMQKKVREAQLSQYNYILVVGEEERVAGTVNVR 521



 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 21  KEIRIRNR-ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQ 79
           +E + R+   +D +R  Y  YG++ + TP +   D L K     D   + +F    +  +
Sbjct: 181 EEAKKRDHRNVDFMRQKYWEYGYEEVVTPNIFNFD-LWKVSGHADHYRENMFLFSVEKAE 239

Query: 80  WISLRYDLTAPLARYVAENFDTIV 103
           W  L+           A    +  
Sbjct: 240 W-GLKPMNCPGHCLMFANRNRSYR 262


>gi|269986191|gb|EEZ92503.1| prolyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 477

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 61/237 (25%), Gaps = 7/237 (2%)

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            A +   + L    + +             S   +     T    EA+L    M++    
Sbjct: 170 EADKNARDILNFYKDFLENMLAVPVIAGKKSQSEKFAGAVTTYTVEAVLSNNFMSQAATS 229

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-------KSLESSTNNIKEM 375
              G           +        P         R I  +       K L  S +     
Sbjct: 230 HYLGQNFAKPFDIKFLDEKNELQYPFQTSWGISMRSIGIMLLVHGDDKGLVLSPHVAPYQ 289

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
             ++    +     L         L+  GIR  +      + G +L   D +  PL I  
Sbjct: 290 CVIIPIIKEEKDKVLEYCGQIESRLKEIGIRVLLDSREDYSPGWKLNEYDLKGVPLKIQI 349

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           G  E     + +K      +        E  +E         +  +    KK ++E 
Sbjct: 350 GKRELESRNISLKTRINNVQSIVSFNEIEQVKEKLEEIHRSMLENVREENKKRIREE 406


>gi|266623074|ref|ZP_06116009.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288865169|gb|EFC97467.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 691

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 46/143 (32%), Gaps = 3/143 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D   ++ +   +  T        L   ++  E +         V +  +          +
Sbjct: 547 DKDGTKKRPYIIHRTSMGCYERTLAWLIEKYEGAFPTWLCPEQVRVLPIS--EKYHDYAE 604

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                L++ GI A +    ++  G +++ A     P  ++ G  E   G++ ++    G 
Sbjct: 605 KVESELKSNGILATVD-ERAEKIGYKIREARLAKLPYMLVVGQKEEEDGLVSVRSRFNGD 663

Query: 455 ELSREIKNNESWREARVAQITIP 477
           E  + + +        +    I 
Sbjct: 664 EGQKSLSDFIDAISREIRTKEIK 686



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 79/259 (30%), Gaps = 10/259 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   I +  E  G+   +TPL+   D         D   +G+F L
Sbjct: 302 GLPLLMPKGAKIIQTLQRWIEDEEEKRGYMRTKTPLMAKKDLYV-ISDHWDHYKEGMFVL 360

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
            D   D +  +LR  +T P   YV           ++YR  P    E     R     + 
Sbjct: 361 GDEEKDDEVFALRP-MTCPFQYYV------YKQSPKSYRDLPCRYGETSTLFRNEDSGEM 413

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                      ++  + +      E      +     +    + + +  ++     +K +
Sbjct: 414 HGLTRVRQFTISEGHLVVRPDQLEEEFKGCVDLAKYCLTTLGLEEDVTYRMSKWDPEKAD 473

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
             L      D+++    + +  +  E   +       G  L  +  ++     ++   + 
Sbjct: 474 HYLGNAEMWDEVEAAMRKILDDIGIEYTEEVGEAAFYGPKLDIQAKNVYGKEDTMITIQL 533

Query: 252 MHELYELVKGTIAGEKGFN 270
              L E    +   + G  
Sbjct: 534 DMFLAERFDMSFVDKDGTK 552


>gi|302554518|ref|ZP_07306860.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302472136|gb|EFL35229.1| prolyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 566

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 52/141 (36%), Gaps = 5/141 (3%)

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITT 382
                  + D L    K   V    + IG+SR + AL      +      KE+ P  +  
Sbjct: 420 RKYADALKLDVLGQNGKPVRVTMGSYGIGVSRAVAALAEQSADDKGLCWPKEVAPADVHV 479

Query: 383 MDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +       ++     +  L  AG+R  +   +  + G +   ++    P  ++ G    +
Sbjct: 480 VAAGKALQTELALDISGKLAAAGVRVLVDDRAGVSPGVKFTDSELIGVPQILVAGRR-AA 538

Query: 442 RGMLQIKDLAKGKELSREIKN 462
            G++++KD   G+     ++ 
Sbjct: 539 DGVVELKDRRTGEREELTVEE 559



 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++   +   +R   +  G   +  P +   +         +     +F LQD  
Sbjct: 48  WLPLGKKVLANVERIVREEMDAVGAQEVLLPAILPREPYEA-TGRWEEYGPELFRLQDRK 106

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 107 GGDYLLGP 114


>gi|167836852|ref|ZP_02463735.1| threonyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R   +  G+  I+TP++    SL +         + +F+ 
Sbjct: 261 GMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDR-SLWEASGHWQNYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + + +  +++        +   ++               G   RNE  G   
Sbjct: 319 TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 40.6 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 33/349 (9%), Positives = 91/349 (26%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPKGWTLWQQVEQYMRRRLDAAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY I   N      + +       D                   L G+ + +     D
Sbjct: 323 KRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     + SE I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEDQINSEAIAFNKLAMSVYADFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
           +   +  ++       G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 NALKACGLEWEELPGEGAFYGPKIEYHIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +    +       +  ++         Q   Q 
Sbjct: 502 SRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPAHAV-VLNIAESQAEYAQTVAQS 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGLRVSADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|291085451|ref|ZP_06353132.2| threonine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291071041|gb|EFE09150.1| threonine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 622

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 92/347 (26%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEFQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL         I+  +    +R  Q 
Sbjct: 574 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNEV-IEKLQQEIRSRSLQQ 619



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 352

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 353 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 404

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 405 EKRIGSDEMWDRAEADLAVALEENN 429


>gi|323527403|ref|YP_004229556.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384405|gb|ADX56496.1| prolyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 578

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEKYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQSDFVIGPTHEEVVTDIARGQIKSYRQLPVNFYQIQTK 138



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 22/86 (25%), Gaps = 3/86 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M +D       +       L  AGI   +     +  G  
Sbjct: 463 DEKGIIWPESIAPFEVVLCPMGYDRSEAVREQADKLYAELVDAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQ 446
               +    P  ++ G      G L+
Sbjct: 522 FADWELIGVPHRLVIGDRGLKEGKLE 547


>gi|83719712|ref|YP_443111.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167620276|ref|ZP_02388907.1| threonyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|123767616|sp|Q2SVD8|SYT_BURTA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|83653537|gb|ABC37600.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 635

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 37/113 (32%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  R+   +R   +  G+  I+TP++    SL +         + +F+ 
Sbjct: 261 GMVFWHPKGWTLWQRVEQYMRRRLDAAGYLEIKTPMIMDR-SLWEASGHWQNYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + + +  +++        +   ++               G   RNE  G   
Sbjct: 319 TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 33/349 (9%), Positives = 90/349 (25%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPKGWTLWQRVEQYMRRRLDAAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY I   N      + +       D                   L G+ + +     D
Sbjct: 323 KRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     + SE I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEDQINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
           +   +  ++       G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 NALKACGLEWEELPGEGAFYGPKIEYHIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +            +  ++         Q   Q 
Sbjct: 502 SRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPFHAV-VLNIAESQAEYAQTVVQS 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGLRVSADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|170782218|ref|YP_001710551.1| prolyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189083492|sp|B0RDZ1|SYP_CLAMS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169156787|emb|CAQ01950.1| prolyl tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 590

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R + P G        +R++N++   +R   E  G   +  P L  ++         D  
Sbjct: 34  IRRQAP-GIFAWLPLGLRVKNKVEAIVREEMERIGAQEVHFPALLPAEPYQA-TGRYDEY 91

Query: 67  NKGVFSLQDDDGQWISLRY 85
             G+F L+D     + L  
Sbjct: 92  GPGMFRLEDRKRAPMVLAP 110



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 26/100 (26%), Gaps = 1/100 (1%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        V +     D    +  +     L  AG+          + G +   A
Sbjct: 485 RGLLWPASISPFDVHVVMTGKDPAVGTAAEELVDALDAAGLDVLFDDRPKVSPGVKFGDA 544

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           +    P  +I G      GM ++ D    +     + +  
Sbjct: 545 ELIGVPTVVIVG-RGAVDGMAELWDRRTNERTPVALADVA 583


>gi|148273336|ref|YP_001222897.1| prolyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166980116|sp|A5CSZ7|SYP_CLAM3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147831266|emb|CAN02222.1| proS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 590

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R + P G        +R++N++   +R   E  G   +  P L  ++         D  
Sbjct: 34  IRRQAP-GIFAWLPLGLRVKNKVEAIVREEMERIGAQEVHFPALLPAEPYQA-TGRYDEY 91

Query: 67  NKGVFSLQDDDGQWISLRY 85
             G+F L+D     + L  
Sbjct: 92  GPGMFRLEDRKRAPMVLAP 110



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 26/99 (26%), Gaps = 1/99 (1%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        V +       +  S  +     L  AG+          + G +   A
Sbjct: 485 RGLLWPASISPFDVHVVMTGKGDEIASASEELVDALDAAGLDVLFDDRPKVSPGVKFGDA 544

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           +    P  +I G      GM ++ D    +     + + 
Sbjct: 545 ELIGVPTIVIVG-RGAVDGMAELWDRRTNERTPVALADV 582


>gi|121593268|ref|YP_985164.1| prolyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|222109990|ref|YP_002552254.1| prolyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|152074743|sp|A1W4B3|SYP_ACISJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782898|sp|B9ME00|SYP_DIAST RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120605348|gb|ABM41088.1| prolyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|221729434|gb|ACM32254.1| prolyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 581

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 41/113 (36%), Gaps = 8/113 (7%)

Query: 7   LRAELPR----GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           +RA L +    G  +     +R+  ++   +R      G      P+++ ++ L +    
Sbjct: 27  MRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVECTMPVVQPAE-LWQETGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            D+    +  + D  G+   ++    ++   +AR    ++  +       +  
Sbjct: 86  FDKMGPELLRIHDRHGRDFVIQPTSEEVVTDIARQELRSYKQLPKNLYQIQTK 138



 Score = 41.0 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/131 (10%), Positives = 35/131 (26%), Gaps = 21/131 (16%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V+I  +  D      ++ +     L  AG+   +     +  G  
Sbjct: 470 DERGIIWPDAIAPFTVVICPVGMDRSEAVKAQAESLYADLLAAGVDVILD-DRGERPGAM 528

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  +  G      G +                  E       +   + +++
Sbjct: 529 FADWELIGVPHRVTIGDKSLKEGQV------------------EYQHRRDASATKVGVAD 570

Query: 481 LVSTVKKILQE 491
           +++ VK+ L  
Sbjct: 571 ILAHVKERLAA 581


>gi|228986962|ref|ZP_04147088.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228772740|gb|EEM21180.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 566

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/250 (9%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ EK +  +
Sbjct: 272 IEAEKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DESGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|220934299|ref|YP_002513198.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782924|sp|B8GPP4|SYP_THISH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219995609|gb|ACL72211.1| prolyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 574

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R+  +  G   +  P ++ ++ L +     ++ 
Sbjct: 31  MIRRLASGLYSWTPLGLRVLRKVEGLVRDEMDRAGALELLMPAVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  L+D   +      
Sbjct: 90  GPELLRLKDRHMREFCFGP 108


>gi|157145991|ref|YP_001453310.1| threonyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157083196|gb|ABV12874.1| hypothetical protein CKO_01745 [Citrobacter koseri ATCC BAA-895]
          Length = 622

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 92/347 (26%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLNASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVVMNITDTQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL         I+  +    +R  Q 
Sbjct: 574 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNEV-IEKLQQEIRSRSLQQ 619



 Score = 37.1 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 14/205 (6%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     +  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 352

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 353 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 404

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 405 EKRIGSDEMWDRAEADLAVALEENN 429


>gi|154509145|ref|ZP_02044787.1| hypothetical protein ACTODO_01666 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798779|gb|EDN81199.1| hypothetical protein ACTODO_01666 [Actinomyces odontolyticus ATCC
           17982]
          Length = 602

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 19/126 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                S         V +       +     Q   + L  AG+   +      + G + K
Sbjct: 488 DDKGLSWPAQIAPFDVHVLATGKGDEVFETAQSLGEELDAAGLDVLVDDRRKVSAGVKFK 547

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
             +    P  ++ G    + G ++I+    G+                   I +P+ E V
Sbjct: 548 DYELVGVPFGLVVGRS-LADGDVEIRVRGTGE------------------TIVVPVEEAV 588

Query: 483 STVKKI 488
           + ++++
Sbjct: 589 ARLREL 594



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R   P G        +R   +I D +R   +  G   +  P L  ++   K     +  
Sbjct: 34  IRRSAP-GIYTWLPLGLRTLRKIEDIVREEMDAMGAQEVHFPGLIPAEPY-KATNRWEEY 91

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F L D  G    L  
Sbjct: 92  GPTLFKLNDRKGGDYLLAP 110


>gi|330686113|gb|EGG97734.1| glycine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 463

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/218 (9%), Positives = 53/218 (24%), Gaps = 5/218 (2%)

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYN--SNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           + +K     E+        ++ +            K            +   ++      
Sbjct: 248 QWLKDLNISEENMRLRDHDADELSHYSNATTDIEYKFPFGWGELWGIASRTDFDLKKHSE 307

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
              E  K     +      Y    S    +   A          +   K   +       
Sbjct: 308 HSGEDFKYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYSQEGVEGSKDERTVLKFHPA 367

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
           + P     +       S+     + L +      +    S++ G + +  D    P  I 
Sbjct: 368 LAPYKAAILPLSKKLSSEAIKIFEQL-SQSFS--IDFDESQSIGKRYRRQDEIGTPYCIT 424

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                     + ++D    +++   I   E++   +V 
Sbjct: 425 FDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLAEKVK 462


>gi|331663198|ref|ZP_08364108.1| threonine--tRNA ligase [Escherichia coli TA143]
 gi|331683225|ref|ZP_08383826.1| threonine--tRNA ligase [Escherichia coli H299]
 gi|331058997|gb|EGI30974.1| threonine--tRNA ligase [Escherichia coli TA143]
 gi|331079440|gb|EGI50637.1| threonine--tRNA ligase [Escherichia coli H299]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641


>gi|295704482|ref|YP_003597557.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294802141|gb|ADF39207.1| threonyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 296

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +RN + +  +  +   G+  I+TP++   + L +     +  ++ ++  
Sbjct: 30  GMPFFLPNGMIVRNELENYWKQKHYKAGYQEIKTPIMMKQE-LWEQSGHWEHYHENMY-F 87

Query: 74  QDDDGQWISLRYDLTAP 90
            + D Q  +++      
Sbjct: 88  SNVDKQNYAIKPMNCPG 104


>gi|105892737|gb|ABF75902.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia
           cenocepacia AU 1054]
 gi|116647586|gb|ABK08227.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia
           cenocepacia HI2424]
          Length = 618

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 238 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 295

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 296 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 353


>gi|149201764|ref|ZP_01878738.1| prolyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144812|gb|EDM32841.1| prolyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 451

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 34/109 (31%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         +I  ++ + +       G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQASAGIYSWLPLGFKILRKLENIVHEEQVRAGHIPVLMPTLQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   + +       +L   + R    ++  +       +  
Sbjct: 90  GAEMLRIKDRHDRDMLYGPTNEELITDIFRAHVGSYKDLPLTLYHIQWK 138


>gi|161344091|ref|YP_400976.2| prolyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|114152269|sp|Q31LT0|SYP_SYNE7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 600

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 35/108 (32%), Gaps = 5/108 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +  G         R+  ++   +R   +  G      P L+ ++   +    E      
Sbjct: 34  RIASGIYAYLPLMWRVLRKVSQIVREEMDATGAQETLLPQLQPAELWQESGRWETYTKAE 93

Query: 70  --VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
             +FSL D   + + L     ++   +AR +  ++  +       +  
Sbjct: 94  GIMFSLDDRQQRQLGLGPTHEEVITAVARDLIRSYRQLPQNLYQIQTK 141



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++     D++ ++  +     L  AGI   +     +  G + K AD 
Sbjct: 493 IWPVAIAPYQAVVVIPNITDTEQVAAAEKIYADLTAAGIETLLDDRDERA-GVKFKDADL 551

Query: 427 RNCPLAIIQGTGERSRGMLQI 447
              P  I+ G      G +++
Sbjct: 552 IGIPYRIVTGRS-LKEGKVEV 571


>gi|81169649|gb|ABB57989.1| prolyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 606

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 35/108 (32%), Gaps = 5/108 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +  G         R+  ++   +R   +  G      P L+ ++   +    E      
Sbjct: 40  RIASGIYAYLPLMWRVLRKVSQIVREEMDATGAQETLLPQLQPAELWQESGRWETYTKAE 99

Query: 70  --VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
             +FSL D   + + L     ++   +AR +  ++  +       +  
Sbjct: 100 GIMFSLDDRQQRQLGLGPTHEEVITAVARDLIRSYRQLPQNLYQIQTK 147



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++     D++ ++  +     L  AGI   +     +  G + K AD 
Sbjct: 499 IWPVAIAPYQAVVVIPNITDTEQVAAAEKIYADLTAAGIETLLDDRDERA-GVKFKDADL 557

Query: 427 RNCPLAIIQGTGERSRGMLQI 447
              P  I+ G      G +++
Sbjct: 558 IGIPYRIVTGRS-LKEGKVEV 577


>gi|325497120|gb|EGC94979.1| threonyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 652

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 307 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 366

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 367 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 425

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 426 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 485

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 486 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 544

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 545 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 603

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 604 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 651


>gi|312879874|ref|ZP_07739674.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Aminomonas
           paucivorans DSM 12260]
 gi|310783165|gb|EFQ23563.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Aminomonas
           paucivorans DSM 12260]
          Length = 631

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ E P GF     K + +   +++  +  ++  G+  I TPL+       +     D  
Sbjct: 252 LQPEAP-GFPFFHPKGMVVLGELVNFWKREHQRRGYCEIRTPLILDRALWERS-GHWDHY 309

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
              ++     D +  +++      
Sbjct: 310 RDNMY-FTTIDERPFAIKPMNCPG 332



 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +   +D L   +    +L++ G+R E      K  G +++ A     P  +
Sbjct: 532 WLAPVQAKILPVSTDLLPYAREVEGILQSWGVRTETDTREEK-LGRKIRDAQLSKVPYML 590

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E     + +++  +G   S  ++  +   E   A
Sbjct: 591 VLGGREAESRTVAVRERVRGDLGSLSLEALKEMLEGEYA 629


>gi|297620271|ref|YP_003708408.1| Threonyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297375572|gb|ADI37402.1| Threonyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/143 (9%), Positives = 40/143 (27%), Gaps = 2/143 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +   + + +R    +  +  I+TP++  S  L +         + +F+ 
Sbjct: 258 GMPFIHPKGMTVWTELTNYLRECLGSANYVEIKTPIM-LSRGLWETSGHWFNYRENMFTS 316

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +D    +++         Y   +  +                 +        F     
Sbjct: 317 EIED-HDYAIKPMNCPGCMLYYKSHVHSYRELPLRVAEIGNVHRYEPSGALSGLFRVRSF 375

Query: 134 DNVGSSAETADAEMCMMMADTLE 156
               +      +++   +   L 
Sbjct: 376 HQDDAHIFMKPSDIEGEILSLLN 398



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/261 (10%), Positives = 68/261 (26%), Gaps = 9/261 (3%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F K +++  E + ++  F  +     +    EL      G  G +E    + 
Sbjct: 375 FHQDDAHIFMKPSDIEGEILSLLNLFEKLYSTFGLSYHLELSTRPEKGTIGTDEEWEQAT 434

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRY 334
              K+  +            G  Y     +          +       +           
Sbjct: 435 AGLKNALDKWGHDYKINEGDGAFYGPKIDFHIRDAINRTWQCGTIQLDMALPQRFALEYT 494

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                R +   +    F      + + ++                I T+           
Sbjct: 495 ASDGERHRPVMLHRAIFGSIERFMGILIEHFAGKFPLWISPLQARILTVA--DRHEPYAH 552

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              Q L+  G R ++   + ++   +++ A        +  G  E     L   +L    
Sbjct: 553 ELMQKLKQQGFRVDID-ATGESVSKKVRTAQLTQINYILTVGDKEMEHKTL---NLRTRD 608

Query: 455 ELSREIKNNESWREARVAQIT 475
            +     + E++  A   +  
Sbjct: 609 NVVHGEIDLEAFIIALKKEKE 629


>gi|320008235|gb|ADW03085.1| prolyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 565

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 54/142 (38%), Gaps = 5/142 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
             D L  + K   V    + IG+SR + AL      +      +E+ P  +  +      
Sbjct: 424 SLDVLGQQGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLCWPREIAPADVHVVAAGKAL 483

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++     ++ L  AG+R  +   +  + G +   ++    P  ++ G    + G+L++K
Sbjct: 484 QTELALDVSEKLNAAGLRVLVDDRAGVSPGVKFTDSELIGVPKILVAGRRS-AEGVLELK 542

Query: 449 DLAKGKELSREIKNNESWREAR 470
           D   G+     +    +    R
Sbjct: 543 DRRTGEREELTVDEAIARLTDR 564



 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 20/68 (29%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++   +   +R   +  G   +  P L   ++        D     +F LQD  
Sbjct: 46  WLPLGKKVLENVTRVVREEMDAIGGQEVLLPALLPKEAYEAS-GRYDEYGDLLFRLQDRK 104

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 105 GADYLLGP 112


>gi|218548710|ref|YP_002382501.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226701412|sp|B7LQ71|SYT_ESCF3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|218356251|emb|CAQ88868.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|324113470|gb|EGC07445.1| threonyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641


>gi|296084982|emb|CBI28397.3| unnamed protein product [Vitis vinifera]
          Length = 149

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ I DS + I+  +G+D + TP +  +D L K     D   + ++S 
Sbjct: 50  GLVFWHPKGAIVRHIIEDSWKKIHIEHGYDLLYTPHVARAD-LWKTSGHLDFYRENMYSQ 108

Query: 74  QDDDGQWISLRY 85
              + +   LR 
Sbjct: 109 ITIEDELYQLRP 120


>gi|229157395|ref|ZP_04285473.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228626122|gb|EEK82871.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 566

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/250 (9%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ EK +  +
Sbjct: 272 IEAEKCIKSM 281



 Score = 40.6 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DESGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A  +    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATAESEEVKVEELQTYIAN 563


>gi|78065148|ref|YP_367917.1| prolyl-tRNA synthetase [Burkholderia sp. 383]
 gi|114152177|sp|Q39JU3|SYP_BURS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77965893|gb|ABB07273.1| Prolyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 578

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGGIELLMPAVQPAE-LWQESGRWEQYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVITDIARNQIKSYRQMPVNFYQIQTK 138


>gi|328861737|gb|EGG10840.1| hypothetical protein MELLADRAFT_42095 [Melampsora larici-populina
           98AG31]
          Length = 486

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                IR+  ++ D +R   E  G   +    L+ + SL K     +   K +F L D  
Sbjct: 74  FLPNAIRVLKKVEDIVREEMERIGASEVSLSHLQ-TSSLWKASGRWNTAGKELFRLSDRK 132

Query: 78  GQWISLRY 85
              + L  
Sbjct: 133 DAHLLLAP 140



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 7/77 (9%)

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            G +L  AD    P+ I+ G       +++I+D+  GK +  E           V    +
Sbjct: 417 IGWKLMDADLVGYPILIVLGNRWIKNQVIEIRDVKNGKVIELE-------NVGLVDGKLV 469

Query: 477 PISELVSTVKKILQENK 493
               L  T+  ++ E+K
Sbjct: 470 DQGRLSDTIGSLINESK 486


>gi|42782910|ref|NP_980157.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|217961239|ref|YP_002339807.1| prolyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229140460|ref|ZP_04269015.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|81409464|sp|Q732Q0|SYP1_BACC1 RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|226731429|sp|B7HLF2|SYP_BACC7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|42738837|gb|AAS42765.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|217063356|gb|ACJ77606.1| prolyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228643021|gb|EEK99297.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|324327716|gb|ADY22976.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 566

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/250 (9%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ EK +  +
Sbjct: 272 IEAEKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|291545263|emb|CBL18372.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus sp.
           18P13]
          Length = 646

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/246 (10%), Positives = 69/246 (28%), Gaps = 8/246 (3%)

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           +G  +L  E   D      + AN     + +         +   +   + +      ++ 
Sbjct: 387 EGHLILRPEQLEDEFRGCLELANYMLTTLGLADDVTYRFSQWDPNNTEKYIGTPEQWDEA 446

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
              +  I + +    + +  I  ++     L+     V+        +   Q       +
Sbjct: 447 QGAMKKILDHL--GIHYTIGIDEAAFYGPKLDIQIKNVHGKEDTLITIQIDQMLAQLFGM 504

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
                Y  +    +   +          R +  L    +    +  + P  +  +     
Sbjct: 505 ----EYTDVDGTKRRPYIIHRTSLGCYERTLALLIEKYAGAFPLW-LAPEQVKLIPIADR 559

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +       + L  AG+R  +    ++  G +++ A     P  +  G  E     + ++
Sbjct: 560 HMDYTLELARKLEAAGMRITVD-DRAEKVGYKIRQAVLEKVPYMLTIGDNEVESKTVSVR 618

Query: 449 DLAKGK 454
               G 
Sbjct: 619 SRRDGD 624



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 19  PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQD--D 76
             K  R+   +   + +  +  G+   +TPL+  SD   K     D   +G+F L D   
Sbjct: 268 LPKGARVIQLLQRFVEDEEQRRGYLLTKTPLMAKSDLY-KISGHWDHYKEGMFVLGDEEK 326

Query: 77  DGQWISLRYDLTAPL 91
           D +  +LR  +T P 
Sbjct: 327 DKEVFALRP-MTCPF 340


>gi|262044121|ref|ZP_06017196.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038520|gb|EEW39716.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 622

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 92/347 (26%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDETWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPQRLSAFYVGENNERQVPVMIHRAILGSLERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWIAPVQVVVMNITDSQAEYVNELTRKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL    E    I+  +    +R  Q 
Sbjct: 574 LVCGDKEVEAGKVAVRTRRGKDLGSMDENEV-IEKLQQEIRSRSLQQ 619



 Score = 40.2 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 11/155 (7%), Positives = 37/155 (23%), Gaps = 3/155 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 352

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                      +     + ++   +   +  V   
Sbjct: 353 LMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDM 387


>gi|222097264|ref|YP_002531321.1| prolyl-tRNA synthetase [Bacillus cereus Q1]
 gi|254782885|sp|B9IVA8|SYP_BACCQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|221241322|gb|ACM14032.1| prolyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 566

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/250 (9%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ EK +  +
Sbjct: 272 IEAEKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|254419068|ref|ZP_05032792.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196185245|gb|EDX80221.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 642

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/143 (9%), Positives = 39/143 (27%), Gaps = 1/143 (0%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   +   +   +R   +  G+  ++TP +       +     D+    +F 
Sbjct: 261 RGMVFWHPKGWILWRVLEAYMRRRLDAAGYVEVKTPQV-LDRKFWEQSGHWDKYRPNMFV 319

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +  +G+ +SL+        +   +   +                 +             
Sbjct: 320 CETVEGETLSLKPMNCPGHVQIFDQGQRSYRELPLRMAEFGACHRYEPSGSLHGLMRVRG 379

Query: 133 VDNVGSSAETADAEMCMMMADTL 155
                +     + ++    A+ +
Sbjct: 380 FTQDDAHIFCREDQIVEETAEFI 402



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 78/270 (28%), Gaps = 22/270 (8%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F +   +  E  + +    S+  +  M   Y  +        G +E    +E + 
Sbjct: 383 DDAHIFCREDQIVEETAEFIKLARSVHADLGMETAYISLGTRPENRAGSDEFWDKAEALM 442

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                +   +   T   G  Y     +   +AI         Q   V             
Sbjct: 443 AEAARAAGTEPVVTEGDGAFYAPKLDFIVKDAIGREWTCGTIQLDYVLPERLDATYIAED 502

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +           + + +++   +          ++ T+  D+D     +   
Sbjct: 503 GQKHRPVMLHRAILGSFERFIGIMIENYAGAFPLWLAPTQAVVATITSDAD--DYARDVM 560

Query: 398 QMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
              + AG+R E+ L + K        + G           P+  + G  E  +G++ I+ 
Sbjct: 561 ARFKAAGLRTEIDLRNEKVGYKVREHSVGK---------VPVIAVVGRQEAEQGLVAIRR 611

Query: 450 LAKGKELSREIKNNESWREARVAQITIPIS 479
           L    +    ++              +  +
Sbjct: 612 LGSQAQTVVTVEEAIRILTDEATPPDLKRA 641


>gi|91772920|ref|YP_565612.1| glycyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|91711935|gb|ABE51862.1| Glycyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 581

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               N      V I  +    + +   +   Q LR  G+        S+  G + +  D 
Sbjct: 466 LRFRNEVAPVQVAILPLLTRDELIEPAKAIAQKLRERGLLV--AYDDSRAIGRRYRRNDE 523

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P +I           + I+D    K++   ++  E+
Sbjct: 524 IGTPYSITIDYDTLEDNSVTIRDRDTMKQVRASVEGIEN 562



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENY-GFDPIETPLLEYSDSLGKFL 60
          GF D       ++ RI    R +Y  + GF  IETP +   D      
Sbjct: 29 GFYDYGPLGCTLKRRIEQIWRELYVIHEGFMEIETPTVGIEDVFVASG 76


>gi|295135444|ref|YP_003586120.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294983459|gb|ADF53924.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 648

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 41/135 (30%), Gaps = 3/135 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +              +          Q   
Sbjct: 509 NESHRPVMIHRAPFGSMERFIAILLEHTAGNFPLWLMPEQA--IILSLSEKYEKYSQKVL 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            +L    IRA +    ++  G +++ A+ +  P  +I G  E   G + ++   +G   +
Sbjct: 567 SLLENHEIRAVLD-NRNETIGKKIREAEVQKFPYMLIVGEQEAKDGTVSVRKHGEGDIGT 625

Query: 458 REIKNNESWREARVA 472
             ++      +  + 
Sbjct: 626 MPVEEFAQIIKNEIE 640



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/240 (11%), Positives = 66/240 (27%), Gaps = 21/240 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS------LGKFLPDEDRPN 67
           G      K   +R R+ + ++   +  G++ + +P + + +         K+  D  +P 
Sbjct: 262 GLPLWLPKGAALRERLENFLKKAQKKAGYEMVVSPHIGHKELYVTSGHYAKYGEDSFQPI 321

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG-PVFRNEKHGPGRFR 126
           K        +G+   L+             +   +           P    E     R+ 
Sbjct: 322 K-----TPHEGEEFLLKPMNCP--------HHCEMYNSQSWSYRDLPKRFAEFGTVYRYE 368

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           Q  +           T D        + L+    K  D  + + +    +    ++ L  
Sbjct: 369 QSGELH-GLTRVRGFTQDDAHIFCTPEQLDEEFKKVIDLTLYVFDSLGFENFTAQVSLRD 427

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +   + +      +K +   +   K        +       G  L     D +     +
Sbjct: 428 PENKEKYIGSDDVWEKAENAIINAAKEKGLNYVIETGEAAFYGPKLDFMVKDALGRSWQL 487


>gi|218295928|ref|ZP_03496708.1| threonyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243666|gb|EED10194.1| threonyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 660

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                     T  L+ AG+RAE      +    +++ A+ +  P  ++ G  E++ G + 
Sbjct: 567 EKQEDYALEVTHRLKEAGLRAE-ADTRPERMQARIRDAELKKVPYVLVVGEKEKAEGAVS 625

Query: 447 IKDLAKG 453
           ++   +G
Sbjct: 626 VRRRHRG 632



 Score = 41.0 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 4/114 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV-- 70
           +G      K   IR  ++  +R      G+  + TP +   +                  
Sbjct: 271 KGLVLWLPKGNVIREELIAFMREEQIKRGYQLVTTPHIGSLELYKTSGHYPYYAESQFPP 330

Query: 71  FSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGP 122
            S ++    +   L+        R  A    +    P R    G V+R EK G 
Sbjct: 331 ISFKERGEEEEYLLKPMNCPHHIRIYAHKKRSYRELPLRLAEFGTVYRYEKAGE 384


>gi|39942942|ref|XP_361008.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|58257459|gb|AAW69351.1| threonyl-tRNA synthetase-like protein [Magnaporthe grisea]
 gi|145009886|gb|EDJ94542.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 812

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 48/476 (10%), Positives = 112/476 (23%), Gaps = 47/476 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +L  IR IY    ++ + TP +  +D L K           +F ++D+ 
Sbjct: 355 WLPHGTRIYNTLLSYIREIYWEKNYEEVITPNIYNAD-LWKQSGHWQFYKDDMFVIKDEK 413

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                L+       A   A + +                +     G      +       
Sbjct: 414 D-TFGLKPMNCPGHALMFA-HRERSHRELPWRVADFGVLHRNEASGALSGLTRVRRFQQD 471

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
            +      +        L             +     + G+  K+ L    +     I  
Sbjct: 472 DAHIFCREDQIKDEILDLFDF----------LRKMYTVMGLTFKLRLSTRPEKYMGAIET 521

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSG-DFTKGANLTSEQIDIMVSFLSIDLEKSMHELY 256
                      + ++  L E      G  +   A   +     +   +   L +      
Sbjct: 522 W------DKAEESLRQALDEFAASEGGVAWELNAGDGAFYGPKIDIAIMDCLNREWQCAT 575

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVM 316
             +            +        K+     +I      V+  +        A     V 
Sbjct: 576 IQLDFVQPQNFNLEYMAGEDAAETKAKAEGAKITAPKVKVKDPQAIIDSAAAARGETVVE 635

Query: 317 NEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG 376
               +           +     +R    +    G    I R    L    +    +    
Sbjct: 636 PAGVEGDKKEKEKVIKKLSPGCARPVMIHRAMAGS---IERFTGILCEHYAGKWPLWLSP 692

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN----QLKYADRRNCPLA 432
              I  +          +    + + A +  ++    +         QL   +       
Sbjct: 693 R-QILVVPVGKGFYDYAEEVRSIFKKAKMFVDVDTSGNTLMKKIRTGQLAQYN-----FI 746

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            + G  E +   + +++            +  +    +     I + E +  + K+
Sbjct: 747 FVVGAEEMNGRQVNVRNR----------DDPATQDRGQP----IALEEALEKLAKL 788


>gi|86143057|ref|ZP_01061479.1| threonyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85830502|gb|EAQ48961.1| threonyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 648

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 46/142 (32%), Gaps = 3/142 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +           + T+    +  +  Q   
Sbjct: 509 NEEHRPVMIHRAPFGSMERFVAILLEHTGGNFPLWLMPEQATVLTLS--ENYENYAQNVL 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            +L    +RA +     +  G +++ A+ +  P  +I G  E + G + ++        +
Sbjct: 567 TLLENHDVRATID-DRGETMGRKIREAEMQKTPYMLIIGEKEANDGTVSVRKHGGEDLGT 625

Query: 458 REIKNNESWREARVAQITIPIS 479
             + +     EA +AQ      
Sbjct: 626 MTVADFAKIIEAEIAQTLKKFE 647



 Score = 36.7 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 18/47 (38%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R R+ + ++   +  G++ + +P +   +      
Sbjct: 262 GLPLWLPKGAALRERLENFLKAAQKKAGYEMVVSPHIGQKELYVTSG 308


>gi|315302972|ref|ZP_07873693.1| prolyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628661|gb|EFR97073.1| prolyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 538

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 78/250 (31%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G             +I   IR   E  G   +  P L+ ++   +     D   + 
Sbjct: 34  QTASGIYSYLPLATLTLRKIEAIIREELEAVGAAELLMPALQPAELWQESGRWSDYGPEL 93

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 94  M-RLKDRAARDFALGPTHEEVITALLRDEIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           ++  +  E+  +M      +  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHASNESLDEVYDLMHQAYSNIFSRCGLEFRSVIADSGSIGGKETKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +   + +    A D      +  V L + +   +   +  K      + I  +V+FL 
Sbjct: 213 LSEIGEDTIAYSDASDYAANVEMAPV-LHMEKKSHELEKELEKVTTPNQKTIADIVTFLE 271

Query: 246 IDLEKSMHEL 255
           + +EK+M  +
Sbjct: 272 VPIEKTMKSM 281


>gi|254383626|ref|ZP_04998976.1| threonyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342521|gb|EDX23487.1| threonyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 658

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 3/122 (2%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R    L    +       + PV    +      +   Q +    +  G+R E+   S 
Sbjct: 538 IERFFAVLLEHYAGAMP-PWLAPVQAVGIPIGDGHVEYLQEFAAEAKKQGLRVEVDASSD 596

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +    +++   +   P  II G  + + G +  +    G + +   K+    + A+V   
Sbjct: 597 R-MQKKIRNHQKLKVPFMIIVGDEDMAAGTVSFRY-RDGSQENGIAKDEALAKLAKVVAD 654

Query: 475 TI 476
            +
Sbjct: 655 RV 656


>gi|325106885|ref|YP_004267953.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Planctomyces
           brasiliensis DSM 5305]
 gi|324967153|gb|ADY57931.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Planctomyces
           brasiliensis DSM 5305]
          Length = 729

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 46/466 (9%), Positives = 121/466 (25%), Gaps = 31/466 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
              K   IR  + D I+       ++P+ +P +   E  ++ G F    D     +    
Sbjct: 273 WLPKGATIRALLEDFIKKELLERQYEPVYSPHIGRVELYETSGHFPYYRDSQFAPI--FG 330

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
            D G+ I    D      R + +   +        +   +   +     +     +    
Sbjct: 331 HDAGRII----DY---CIRKLQDGELSGESEQTLLQAAEIMGYQADDYQKANSNEEKIAA 383

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
                 +     +  M       +   +   +  +  R    G + +    G+     R+
Sbjct: 384 LRKWEKQQERYLLKPMNCPHHAQIYKSQPRSYRDLPVRLAEFGTVYRHEQTGELNGMLRV 443

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
             L   D       + V+        +      K   L   ++ + +     D      E
Sbjct: 444 RGLTQDDAHLFCMPEQVEEEFR-QTLELVQFVLKSVGLNDYRVQLSLRDPGSDKYVGSEE 502

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
            ++  + ++        L             +      +  +             +    
Sbjct: 503 NWQQAEASLRKV-----LNESGLSFTACEGEAAFYGPKADFMVRDAIGREWQLGTVQLDY 557

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
            + E+ +    G+              +   +    F      + + ++    +      
Sbjct: 558 NLPERFELEYVGADN---------KMHRPVMIHRAPFGSMERFVGMLIEHFAGAFPLWLA 608

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              + +  +          Q   + L+  G R    + S K    +++ A     P  ++
Sbjct: 609 PEQIRVLPV--TDKVADYAQDVVKRLKKEGFRTSADMRSCK-VNAKIRDAQLELIPYMLV 665

Query: 435 QGTGERSRGMLQIKD-LAKGKELSREIKNNESWREARVAQITIPIS 479
            G  E  +  + ++D +         + +  +     V    I  S
Sbjct: 666 VGPKEAEQNAVSVRDRIESADIGMMPLDDAIAKFRDEVTNKEIRQS 711


>gi|221483162|gb|EEE21486.1| glycyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 134

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 33/108 (30%), Gaps = 2/108 (1%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L            V     +   +  ++ +     LR  G        S+ + G + + A
Sbjct: 5   LNLHPALAPFQAAVFPVVTNVH-ELTARARRLCGWLRERGFSVLWDFSST-SIGRRYRRA 62

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P          + G + ++     ++   + +  ES+ + R  
Sbjct: 63  DGLGIPFCFTLDRTSLNDGTVTVRWRNSAEQRRLKFEEAESFLKERTE 110


>gi|213650865|ref|ZP_03380918.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 622

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 574 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 612



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 352

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 353 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 404

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 405 DKRIGSDEMWDRAEADLAVALEENN 429


>gi|326623540|gb|EGE29885.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 622

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 574 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 612



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 352

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 353 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 404

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 405 DKRIGSDEMWDRAEADLAVALEENN 429


>gi|312194258|ref|YP_004014319.1| prolyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225594|gb|ADP78449.1| prolyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 468

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/199 (9%), Positives = 55/199 (27%), Gaps = 5/199 (2%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  + +         +   +   R          E ++G     +       G     
Sbjct: 177 LEVYQDFMVSVLAMPVFVGRKTRKERFAGAINTLTCEGMMGDGKALQMATSHELGQNFAR 236

Query: 332 GRY-----DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                                 +   +    ++                  V++  +  D
Sbjct: 237 AFDIDYLGADGARHLAWTTSWGSSTRMVGGLIMAHGDDAGLRVPPRLAPTQVVVLPVRDD 296

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              ++        L+ AG+RA +      +FG ++   + +  P+ +  G  + + G + 
Sbjct: 297 EKVVATATQIADALKAAGVRATLDARPGLSFGRRVTDWELKGAPVRVEVGPRDLAVGNVT 356

Query: 447 IKDLAKGKELSREIKNNES 465
           +     G++++  +    +
Sbjct: 357 LARRDTGEKITVPLAEAAA 375


>gi|209966088|ref|YP_002299003.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW]
 gi|238065118|sp|B6IV67|SYT_RHOCS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|209959554|gb|ACJ00191.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW]
          Length = 651

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 3/98 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLA 432
            + PV +      S++ +  Q   + LR AG+R E  + + K N     +       P+ 
Sbjct: 542 WLAPVQVVVATIVSEADAYAQTVAETLRRAGLRVEADVRNEKINLKV--REHSLAKVPVM 599

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           ++ G  E  +G + ++ L    +    + +  +  +  
Sbjct: 600 LVVGAREAEQGTVAVRRLGGKDQEVLALGDAVARLKDE 637



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 7/156 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   + + IR   +  G+  + TP L Y  SL K     D     +F +
Sbjct: 262 GSVFWHPKGWALYRTLENYIRTKLDAAGYVEVRTPQL-YDSSLFKASGHWDMYGDNMFKI 320

Query: 74  -----QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQ 127
                +D   +++ ++        +   +   +    P R    G   RNE  G      
Sbjct: 321 RESVAEDGTEKFLGVKPMNCPAHVQIFRQGLKSYRDLPLRMAEFGNCHRNEPSGALHGIL 380

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
            ++    +      T D             +G+ ++
Sbjct: 381 RVRNFTQDDAHIFCTEDQVGQEAKEYFALQLGVYKD 416


>gi|58584338|ref|YP_197911.1| prolyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|81311670|sp|Q5GTK5|SYP_WOLTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58418654|gb|AAW70669.1| Prolyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 425

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 47/160 (29%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  ++  G        +R+   I   IR+     G      P ++ + SL +     D  
Sbjct: 31  LIKQIASGIYTWLPLGLRVLKNIEGIIRDEMNKSGAIEALMPCVQPA-SLWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +  ++D   + +       ++   L R + +++  +       +         R   
Sbjct: 90  GKTMLRIRDRHEEDMLFGPTHEEVATDLIRDIVKSYKNLPLCLYQIQWKFRDEVRPRYGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F        +    SA  +   M        + +G
Sbjct: 150 MRGREFLMKDAYSFNVNYESALNSYNLMYKTYIKIFKRMG 189



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
             ++ +         L++  +   ++  +  + G +    D    P  II G    S  +
Sbjct: 343 KTAEYVEIANKIYSTLKSDEV---LYDDTEGSIGVKFAKMDLIGLPWQIIVGKKAVSENI 399

Query: 445 LQIKDLAKGKELSREIKNNESW 466
           ++IK+ A GK    +I+   ++
Sbjct: 400 IEIKNRATGKVEEVQIEEAINY 421


>gi|53719558|ref|YP_108544.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|53725296|ref|YP_102787.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76810857|ref|YP_333290.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121600801|ref|YP_992866.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385818|ref|YP_001026205.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126441516|ref|YP_001058752.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126449349|ref|YP_001080524.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126453502|ref|YP_001066005.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134282197|ref|ZP_01768902.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167003090|ref|ZP_02268880.1| threonine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167719848|ref|ZP_02403084.1| threonyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167738851|ref|ZP_02411625.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167816071|ref|ZP_02447751.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167824445|ref|ZP_02455916.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167845979|ref|ZP_02471487.1| threonyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167894556|ref|ZP_02481958.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167902959|ref|ZP_02490164.1| threonyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|167911196|ref|ZP_02498287.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167919220|ref|ZP_02506311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217423341|ref|ZP_03454842.1| threonine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|226199711|ref|ZP_03795264.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237812016|ref|YP_002896467.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238562605|ref|ZP_04610138.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242317788|ref|ZP_04816804.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254177492|ref|ZP_04884147.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254180004|ref|ZP_04886603.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254188582|ref|ZP_04895093.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254197889|ref|ZP_04904311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254199739|ref|ZP_04906105.1| threonyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254206061|ref|ZP_04912413.1| threonyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254259413|ref|ZP_04950467.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297839|ref|ZP_04965292.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254358432|ref|ZP_04974705.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|73919776|sp|Q62KI2|SYT_BURMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919777|sp|Q63TM2|SYT_BURPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123771913|sp|Q3JT13|SYT_BURP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223324|sp|A3MJT8|SYT_BURM7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223325|sp|A2S2N6|SYT_BURM9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223326|sp|A1V3R3|SYT_BURMS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223327|sp|A3NUI4|SYT_BURP0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223328|sp|A3N8T1|SYT_BURP6 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|52209972|emb|CAH35944.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|52428719|gb|AAU49312.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76580310|gb|ABA49785.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121229611|gb|ABM52129.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293838|gb|ABN03107.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126221009|gb|ABN84515.1| threonine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|126227144|gb|ABN90684.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242219|gb|ABO05312.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134246235|gb|EBA46324.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|147749335|gb|EDK56409.1| threonyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147753504|gb|EDK60569.1| threonyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148027559|gb|EDK85580.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157806992|gb|EDO84162.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157936261|gb|EDO91931.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160698531|gb|EDP88501.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169654630|gb|EDS87323.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|184210544|gb|EDU07587.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|217393199|gb|EEC33220.1| threonine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|225928297|gb|EEH24331.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237505158|gb|ACQ97476.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238522290|gb|EEP85735.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242141027|gb|EES27429.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243061341|gb|EES43527.1| threonine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254218102|gb|EET07486.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 635

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R   +  G+  I+TP++    SL +         + +F+ 
Sbjct: 261 GMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDR-SLWEASGHWQNYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + + +  +++        +   ++               G   RNE  G   
Sbjct: 319 TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/349 (9%), Positives = 91/349 (26%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPKGWTLWQQVEQYMRRRLDAAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY I   N      + +       D                   L G+ + +     D
Sbjct: 323 KRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     + SE I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEDQINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
           +   +  ++       G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 NALKACGLEWEELPGEGAFYGPKIEYHIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +    +       +  ++         +   Q 
Sbjct: 502 SRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPAHAV-VLNIAESQAEYARTVAQS 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGLRVSADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|51893696|ref|YP_076387.1| threonyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|73919833|sp|Q67LA3|SYT_SYMTH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|51857385|dbj|BAD41543.1| threonyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 651

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 38/106 (35%), Gaps = 1/106 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M PV    +       +        L+ AG+R E     ++  G +++ A+    P  +
Sbjct: 537 WMAPVQARVLPITDRHHAYAGEVVAKLQEAGLRVEGDY-RNEKVGYKIREAELLKIPFIL 595

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           + G  E   G + ++           + +  +  ++ +A   +  +
Sbjct: 596 VVGDKEAEAGAVAVRRRGMKDLGPMPLADFLALAQSEIASKAMDEA 641


>gi|66821029|ref|XP_644046.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|75016778|sp|Q8MP20|SYTC2_DICDI RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21240667|gb|AAM44378.1| hypothetical protein [Dictyostelium discoideum]
 gi|60472212|gb|EAL70165.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 698

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 40/122 (32%), Gaps = 4/122 (3%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R++  L    +            I  +   +      Q     +  AG   ++ L  SK
Sbjct: 577 ERMMAILMEHTAGKWPFWLSPRQCI-VIPVSNKFNQFAQEIQSKINLAGYDVDVDLNDSK 635

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQI--KDL-AKGKELSREIKNNESWREARVA 472
               +++ A        I+ G  E    +L +  +DL    K++   + +  S  +  + 
Sbjct: 636 LLSKKIREATVSQYNYIIVVGQEEIDTNILNVRKRDLPEDNKQVKLSLNDLFSEFKLNIE 695

Query: 473 QI 474
           Q 
Sbjct: 696 QF 697



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 6/175 (3%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ-DD 76
                 +I N++L  +R  Y   G+  + +P + Y+  L +     D     +FS + D 
Sbjct: 305 FLPHGTKIYNKLLQFLRLEYRKRGYQEVISPNI-YNQKLWETSGHWDNYKDNMFSFECDH 363

Query: 77  DGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGP-GRFRQFIQCDVD 134
                SL+           A    +    P R    G + RNE HG      +  +   D
Sbjct: 364 --TQYSLKPMNCPGHCLMYAHRARSYKELPMRIADFGVLHRNETHGSLSGLTRVRRFQQD 421

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           +             +              ++   +      D  L ++ +    +
Sbjct: 422 DAHIFCTPDMIREEIKQCLDFMKYVYTIFNFTFHLELSTRPDSYLGELSVWEKAE 476


>gi|257139340|ref|ZP_05587602.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 593

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 37/113 (32%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  R+   +R   +  G+  I+TP++    SL +         + +F+ 
Sbjct: 256 GMVFWHPKGWTLWQRVEQYMRRRLDAAGYLEIKTPMIMDR-SLWEASGHWQNYRENMFT- 313

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + + +  +++        +   ++               G   RNE  G   
Sbjct: 314 TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 365


>gi|218282600|ref|ZP_03488838.1| hypothetical protein EUBIFOR_01424 [Eubacterium biforme DSM 3989]
 gi|218216471|gb|EEC90009.1| hypothetical protein EUBIFOR_01424 [Eubacterium biforme DSM 3989]
          Length = 564

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 53/532 (9%), Positives = 134/532 (25%), Gaps = 87/532 (16%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ +++ + IR   +      +  P L   D   +     +     +FSL D  
Sbjct: 42  IMPMGKKVLSKVENIIREEMDAKDAQELLMPALIPEDVYVQS-GRREAFGSNMFSLSDRY 100

Query: 78  GQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FRQ 127
            +   L     +L    A   + +  +                ++  P         F  
Sbjct: 101 NKRYVLGPTHEEL---FAVASSMDGKSYKDFPYNLYQIQTKYRDETRPRYGLIRVREFIM 157

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
                 D   +  + A  +M       ++ +G+   +Y I   +   + G+L +      
Sbjct: 158 KDAYTFDVDEAGLDVAYNKMYDAYCRIMDRLGL---EYKIVKADTGAMGGLLSEEYQALS 214

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL--- 244
               + ++     D      +  V   + +   +            ++ I+ + +F    
Sbjct: 215 SIGEDVVVGCVGCDYSSNLEITEVVDTMQDSTEEELSMEVVDTP-NAKTIEEVAAFFGKK 273

Query: 245 -------------------SIDLEKSMHELY--ELVKGTIAGEKGFNELVV--------- 274
                               I  ++ ++E    +L+         F ++           
Sbjct: 274 ESDFVKTLLYNVDGKVIAFCIPGDRELNETKALKLLGANEMEMASFEQVEQVTHARVGFA 333

Query: 275 ----------ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
                     +   ++           S   ++ +        E      V      P  
Sbjct: 334 GPVGIDCPVYMDRQIKHMKNFIVGANQSDRHIKNVNCKDFTPVEVADLCQVKEGDICPKC 393

Query: 325 FGSVGGGGR--------------------YDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
              +                         Y    ++ +   + + G  +      VA + 
Sbjct: 394 GKKLTFQHGIEVGNLFKLGTKYSKSMNLYYTDANNQLQPVWMGSYGIGLERCMAAVADQH 453

Query: 365 LE----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +         I      ++     D + +       +  +       +   + +  G +
Sbjct: 454 HDDFGIKWPVEIAPFRLAIVPVSLKDEEQVKIANDLYEYCKEHKFDVILDDRNER-PGVK 512

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            K  +    P  I  G      G L+  D   G++    I++  S  E   A
Sbjct: 513 FKDMELIGIPYRITVG-RGVKEGKLEWTDRYTGEKSEIAIEDVYSEIEKVFA 563


>gi|194246566|ref|YP_002004205.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|254783531|sp|B3R0I8|SYT_PHYMT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|193806923|emb|CAP18352.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 640

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/388 (10%), Positives = 104/388 (26%), Gaps = 19/388 (4%)

Query: 90  PLARYVAENF---DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
              R + E +     ++          +     +      +  + ++    +        
Sbjct: 269 STIRRIIERYIVDKELIGGYEHVYTPVIANINIYSTSGHLEHYRDNMFPAMNMPNGEKYV 328

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  M       +   +   +  +  R    G++ ++   G     ER+  +   D     
Sbjct: 329 LRPMNCPHHMMIYKNKIYSYKELPIRIAELGMMHRLEKSGAVSGLERVREMTLNDAHIFI 388

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
               +K    +       +  +  ++ +  I  +     +D +K  ++     K     +
Sbjct: 389 RTDQIKEEFKKIVNF-IQEVYRDFDINN-YIFRLSYRDPLDKKKYFNDDEMWNKAENILK 446

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
           +   EL +    V+              +       T    +     P           G
Sbjct: 447 EIMLELKLNFTEVQGEAAFYGPKLDVQVLTALGHEETLSSVQIDFLLPKRFNLTYVGEDG 506

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                              +     S         L+  +           V++  ++ D
Sbjct: 507 KKY------------SPILIHRCIVSTMERFFSYLLERYKGFFPFWLAPLQVILIPINLD 554

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            + L   Q    +L   G R E+    S     +++ A +   P  I+ G  E    ++ 
Sbjct: 555 -NHLIYAQKIKSILLKNGFRVEINQKDS-TLSYKIREAQKWKIPYQIVIGDKEIKDDIIT 612

Query: 447 IKDLAKGKELSREIKNNESWREARVAQI 474
            ++  K  ++  +I        +++ Q 
Sbjct: 613 FREYKKDLQIMMKIDKFIHLLISKMKQK 640


>gi|161503559|ref|YP_001570671.1| threonyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160864906|gb|ABX21529.1| hypothetical protein SARI_01637 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 622

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 92/347 (26%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL         I+  +    +R  Q 
Sbjct: 574 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNEV-IEKLQQEIRSRSLQQ 619



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 352

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 353 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 404

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 405 DKRIGSDEMWDRAEADLAVALEENN 429


>gi|46199818|ref|YP_005485.1| threonyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|73919837|sp|Q72HH1|SYT_THET2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46197445|gb|AAS81858.1| threonyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 659

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 1/88 (1%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                  +     L+ AG+RAE      +    +++ A+ +  P  ++ G  E++ G + 
Sbjct: 567 EKQEGYAREVAGRLKEAGLRAEADTRPER-MQARIRDAEVQKVPYVLVVGEREKAEGAVS 625

Query: 447 IKDLAKGKELSREIKNNESWREARVAQI 474
           ++   KG   +  +            + 
Sbjct: 626 VRRRKKGNLGTMPLAAFLEGALREYRER 653



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 4/114 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV-- 70
           +G      K   +R  ++  +R      G+  + TP +   +                  
Sbjct: 271 KGLVLWLPKGNVVREELMAFMREEQVRRGYQLVTTPHIGSLELYKTSGHYPYYAESQFPP 330

Query: 71  FSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGP 122
            S ++    +   L+        R  A    +    P R    G V+R EK G 
Sbjct: 331 ISFKERGEEEEYLLKPMNCPHHIRIYAYRKRSYRELPLRLAEFGTVYRYEKAGE 384


>gi|300813650|ref|ZP_07093972.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512192|gb|EFK39370.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 570

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G     T   R+  +I + +R   +  G   I    ++  +         ++    +F 
Sbjct: 37  SGIYTYLTLGYRVVRKIENIVREEMDRCGSQEILMSAIQPREIWEDS-GRWEKYGPEMFK 95

Query: 73  LQDDDGQWISLRY 85
           L+D   +   L  
Sbjct: 96  LKDRHDRDFCLGP 108


>gi|225025724|ref|ZP_03714916.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC
           23834]
 gi|224941505|gb|EEG22714.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC
           23834]
          Length = 635

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NFG--NQLKYADRRN 428
            + PV +  M+               L+ AG+RAE  L + K        +Q++Y     
Sbjct: 537 WLAPVQMVVMNITEKQADYCLEVVNKLKAAGLRAEADLRNEKIGYKIRDNSQMRY----- 591

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGK 454
            P  ++ G  E   G + ++   KG+
Sbjct: 592 -PYQVVVGDKEMENGQVAVR--RKGE 614



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 33/113 (29%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   I   +R   +  G+  ++TP +    +  +           +F+ 
Sbjct: 263 GMVFWHPRGWTLWQTIEQHMRRELDAAGYREVKTPQI-LDKTFWEKSGHWANYKDNMFT- 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +    +        P R    G   RNE  G   
Sbjct: 321 TSSEKRDYAVKPMNCPGHVQIF-NHGLRSYRDLPMRLAEFGSCHRNEPSGALH 372


>gi|295425303|ref|ZP_06818006.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065079|gb|EFG55984.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 659

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 60/204 (29%), Gaps = 3/204 (1%)

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI--LGFPVMNEKQKPVVF 325
             +E+   S+ + K   +   +           Y      +    LG        +    
Sbjct: 448 ANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFM 507

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
                G  Y G         +   G    + R I  L  +                   +
Sbjct: 508 LPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPIQAEIIPVN 567

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           +       +   Q L   G RAE+    ++  G +++ +  +  P  ++ G  E     +
Sbjct: 568 NDAHGEYAEKVRQELAKRGFRAEVD-NRNEKLGYKIRESQTQKVPYTLVLGDEEMKSNSV 626

Query: 446 QIKDLAKGKELSREIKNNESWREA 469
            ++     +E+S+ + +  +  +A
Sbjct: 627 NVRRYGTDEEISKSLDDFINEIDA 650



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 54/188 (28%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 275 GLPYWMPKGATIRRVVERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYRDDMF 331

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 332 PPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 391

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                +   A++  ++ D  +   I    + +   + K          
Sbjct: 392 REMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTQKYFANDE 451

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 452 MWERSQKM 459


>gi|229129095|ref|ZP_04258068.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146390|ref|ZP_04274761.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|296504314|ref|YP_003666014.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228637023|gb|EEK93482.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228654332|gb|EEL10197.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|296325366|gb|ADH08294.1| prolyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 566

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ +K +  +
Sbjct: 272 IEADKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|157158126|ref|YP_001463015.1| threonyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157161181|ref|YP_001458499.1| threonyl-tRNA synthetase [Escherichia coli HS]
 gi|170019932|ref|YP_001724886.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|193068904|ref|ZP_03049863.1| threonyl-tRNA synthetase [Escherichia coli E110019]
 gi|209919078|ref|YP_002293162.1| threonyl-tRNA synthetase [Escherichia coli SE11]
 gi|218695280|ref|YP_002402947.1| threonyl-tRNA synthetase [Escherichia coli 55989]
 gi|256018088|ref|ZP_05431953.1| threonyl-tRNA synthetase [Shigella sp. D9]
 gi|332279130|ref|ZP_08391543.1| threonyl-tRNA synthetase [Shigella sp. D9]
 gi|166987321|sp|A7ZMI6|SYT_ECO24 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166987322|sp|A8A0R2|SYT_ECOHS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083607|sp|B1IPK9|SYT_ECOLC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238065113|sp|B6IBD7|SYT_ECOSE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783522|sp|B7L6J2|SYT_ECO55 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157066861|gb|ABV06116.1| threonyl-tRNA synthetase [Escherichia coli HS]
 gi|157080156|gb|ABV19864.1| threonyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169754860|gb|ACA77559.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|192957699|gb|EDV88143.1| threonyl-tRNA synthetase [Escherichia coli E110019]
 gi|209912337|dbj|BAG77411.1| threonyl-tRNA synthase [Escherichia coli SE11]
 gi|218352012|emb|CAU97745.1| threonyl-tRNA synthetase [Escherichia coli 55989]
 gi|320197902|gb|EFW72510.1| Threonyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323948091|gb|EGB44082.1| threonyl-tRNA synthetase [Escherichia coli H120]
 gi|324016472|gb|EGB85691.1| threonyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|332101482|gb|EGJ04828.1| threonyl-tRNA synthetase [Shigella sp. D9]
          Length = 642

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|332559243|ref|ZP_08413565.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276955|gb|EGJ22270.1| prolyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 445

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/455 (8%), Positives = 103/455 (22%), Gaps = 57/455 (12%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  RI   +       G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQQAAGIYSWLPLGFKVLKRIEQIVHEEQIRAGHIPLLMPTLQPAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +  + D                                        + +        
Sbjct: 90  GEEMLRITDR--------------------------------------HKRDMLYGPTNE 111

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           + I     +  SS +     +  +     + +  +           K             
Sbjct: 112 EMITDIFRSHVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLDYESAI 171

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                  +  LR  +++    +  ++   G    DN+ +F   A+    ++    +   +
Sbjct: 172 HAYNRHMVSYLRTYERMGLQAI-PMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDL 230

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                           +       E   I +        ++     +   +  E      
Sbjct: 231 K-----------FGDRVVNYDDRAECEAIVKEWTAPYARTDETHDEAIFAQIPEERRRSS 279

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
               +G       +     G+       + +        +  +     I           
Sbjct: 280 RGIEVGQIFYFGTKYSEPMGATVVTAGGNRVPVHMGSHGIGVSRLLGAIIEASH--DDKG 337

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAE-MFLGSSKNFGNQLKYA 424
                        I  +     S     +   + L   G+  E ++    +  G +    
Sbjct: 338 IIWPEGVTPFHAGIVNLKQGDSSTDLACEALYRDLSARGL--EPLYDDRDERAGAKFATM 395

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           D    P  I  G    + G +++ +   G+     
Sbjct: 396 DLIGLPWRITVGPRGIAAGKVELTNRRTGESEEMS 430


>gi|322368025|ref|ZP_08042594.1| glycyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320552041|gb|EFW93686.1| glycyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 576

 Score = 54.1 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 33/107 (30%), Gaps = 3/107 (2%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V +  +          +     LR+ G+  ++    S N G + +  D    P  + 
Sbjct: 473 PTTVGVFPLMDKDGMGETARDIAAELRSHGL--DVVYDDSGNIGRRYRRQDEVGTPFCVT 530

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                     + +++    +++   + +  +      +      SEL
Sbjct: 531 VDYEGLEDDTVTLRERDSTEQVRVAVDDLPNLIADLRSGER-AFSEL 576



 Score = 37.1 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 1/49 (2%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
           GF     +   ++  I DS R+ ++   G   IE P +          
Sbjct: 26 SGFYVYGPQGAALKRNIEDSWRDRFQVQEGHREIEAPTVMPEPVFEASG 74


>gi|298694847|gb|ADI98069.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 463

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/231 (7%), Positives = 55/231 (23%), Gaps = 8/231 (3%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           ++        +  L    +     +   +EL         +       K           
Sbjct: 240 NYWKTFASDWLTSLNMNSENMRLRDHDEDELSHY-----SNATTDIEYKFPFGWGELWGI 294

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
            +   ++         E  +     +      Y    S    +   A          +  
Sbjct: 295 ASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEG 354

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
            K   +  +    + P     +        +     + L ++     +    S++ G + 
Sbjct: 355 SKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQL-SSKFS--IDFDESQSIGKRY 411

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  D    P  +           + ++D    +++   I   E++   +  
Sbjct: 412 RRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKTK 462


>gi|282883093|ref|ZP_06291693.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297070|gb|EFA89566.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 570

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G     T   R+  +I + +R   +  G   I    ++  +         ++    +F 
Sbjct: 37  SGIYTYLTLGYRVVRKIENIVREEMDRCGSQEILMSAIQPREIWEDS-GRWEKYGPEMFK 95

Query: 73  LQDDDGQWISLRY 85
           L+D   +   L  
Sbjct: 96  LKDRHDRDFCLGP 108


>gi|195035423|ref|XP_001989177.1| GH11579 [Drosophila grimshawi]
 gi|193905177|gb|EDW04044.1| GH11579 [Drosophila grimshawi]
          Length = 493

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/221 (10%), Positives = 64/221 (28%), Gaps = 21/221 (9%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           EL       +    + +   +      G   + G   +  +   +    Q   +      
Sbjct: 280 ELEQWDAAEKALAESLDEFGMPWKENHGDGAFYGPKIDITIMDALKRPFQCATIQLDFQL 339

Query: 331 GGRYD-GLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
             R++   ++    +  P       +G    ++A+ +   +      + P  +  +    
Sbjct: 340 PIRFNLNYIADDGEKKRPVIIHRAILGSVERMIAILTENYAGKWPFWLSPRQVMVVPVGP 399

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                 +     L  AG  +E    +      +++ A        ++ G  ERS   + +
Sbjct: 400 AYDEYAKSVRDQLYAAGFMSESDCDAGDTMNKKIRNAQLAQFNFILVVGDKERSSNTVNV 459

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           +                           + ++EL+S ++KI
Sbjct: 460 R------------------TRDNKVHGEVSVAELISKLQKI 482



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N +++ IR  Y   GF  + +P + Y+  L             +FS + + 
Sbjct: 117 FQPRGAHIYNTLMNLIRGEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYADNMFSFEAEK 175

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 176 -EKFALKPMNCPG 187


>gi|89098602|ref|ZP_01171484.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086564|gb|EAR65683.1| prolyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 568

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 35/102 (34%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++  +I   +R   ++ G   +  P L+ ++ L +           +  L
Sbjct: 38  GVYSYLPMARKVLQKIEAIVREEMDDAGASELLMPALQQAE-LWQESGRWYTYGPELMRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D + +  +L     ++   L R   +++  +       +  
Sbjct: 97  KDRNDREFALGATHEEVITSLVRDEVKSYKRLPLTLYQIQTK 138



 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 20/127 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++      +I     D       +   + LR  G          +  G +   AD 
Sbjct: 462 IWPADLAPFKVHVIAVNMKDEAQAGLGEELYKELRGNGYEVLFDDRPERA-GVKFADADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ I  G    S G++++K  + G+                     I   +L+  + 
Sbjct: 521 IGLPVRITAGKK-ASEGIVEVKVRSTGE------------------MEEIHKDQLLEHIA 561

Query: 487 KILQENK 493
            IL   K
Sbjct: 562 SILTSQK 568


>gi|319400901|gb|EFV89120.1| glycyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 463

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/219 (9%), Positives = 51/219 (23%), Gaps = 4/219 (1%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E    +  +    +  +                   K            +   Y+     
Sbjct: 248 EWLTDLNISEDNMRLRDHDEDELSHYSN-ATTDIEYKFPFGWGELWGIASRTDYDLRQHS 306

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               E  K     +      Y    S    +   A          +   K   +  +   
Sbjct: 307 EHSGEDFKYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYAEEGVEGSKDARTVMHFHP 366

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P     +       S+     + L +      +    S++ G + +  D    P  I
Sbjct: 367 ALAPYKAAVLPLSKKLSSEAIKIFEQLSS---SFAIDFDESQSIGKRYRRQDEIGTPYCI 423

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + ++D    +++   I   E++   +V 
Sbjct: 424 TFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLADKVK 462


>gi|56752145|ref|YP_172846.1| prolyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81820564|sp|Q5N044|SYP_SYNP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56687104|dbj|BAD80326.1| proline-tRNA ligase [Synechococcus elongatus PCC 6301]
          Length = 600

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 35/108 (32%), Gaps = 5/108 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +  G         R+  ++   +R   +  G      P L+ ++   +    E      
Sbjct: 34  RIASGIYAYLPLMWRVLRKVSQIVREEMDATGAQETLLPQLQPAELWQESGRWETYAKAE 93

Query: 70  --VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
             +FSL D   + + L     ++   +AR +  ++  +       +  
Sbjct: 94  GIMFSLDDRQQRQLGLGPTHEEVITAVARDLIRSYRQLPQNLYQIQTK 141



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++     D++ ++  +     L  AGI   +     +  G + K AD 
Sbjct: 493 IWPVAIAPYQAVVVIPNITDTEQVAAAEKIYADLTAAGIETLLDDRDERA-GVKFKDADL 551

Query: 427 RNCPLAIIQGTGERSRGMLQI 447
              P  I+ G      G +++
Sbjct: 552 IGIPYRIVTGRS-LKEGKVEV 571


>gi|221633039|ref|YP_002522264.1| glycyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|254782309|sp|B9L0I4|SYG_THERP RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|221156893|gb|ACM06020.1| glycyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 468

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 69/263 (26%), Gaps = 49/263 (18%)

Query: 257 ELVKGTIAGEKGFNE-LVVISELVRKSGYNSNRIKISSTIVRGLEYYTG--CVYEAILGF 313
           E        E+ F+  L  + + +R  G+  +R++      + L +Y+     +E    F
Sbjct: 226 EYFIRPEMWEEYFDHWLNEMGQFLRWIGFKPDRLRTREHGPQELSHYSRKTVDFEYFFPF 285

Query: 314 PVMN--------EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                       +          G    Y       +                +  L   
Sbjct: 286 GWKELCGLAYRTDYDLRRHQEYSGEDLTYFDQERNERYIPHVIEPTMGVERLFLALLCDA 345

Query: 366 E-----------------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
                                +       V +  +    + ++  +   Q LR    R E
Sbjct: 346 YDEEPAVDVNGNPYTRVVLRFHPRVAPYKVAVLPLLRKPELVTVAREVAQELRQY-FRIE 404

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                +++ G + +  D    P  +           + I+D                   
Sbjct: 405 --YDETQSIGRRYRRQDEIGTPYCVTIDYQTLEDRTVTIRDRDT---------------- 446

Query: 469 ARVAQITIPISELVSTVKKILQE 491
             + Q+ +PIS LV  ++  L+ 
Sbjct: 447 --MQQVRVPISGLVEEIEARLRS 467


>gi|329314241|gb|AEB88654.1| Glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
          Length = 463

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/219 (6%), Positives = 50/219 (22%), Gaps = 4/219 (1%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +    +  +    +  +                   K            +   ++     
Sbjct: 248 DWLTNLNMSSENMRLRDHDEDELSHYSN-ATTDIEYKFPFGWGELWGIASRTDFDLRKHA 306

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               E  +     +      Y    S    +   A          +   K   +  +   
Sbjct: 307 EHSGEDFRYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDARTVLHFHP 366

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P     +        +     + L ++     +    S++ G + +  D    P  +
Sbjct: 367 ALAPYKAAILPLSKKLSGEAIKIFEQL-SSKFS--IDFDESQSIGKRYRRQDEIGTPYCV 423

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + ++D    +++   I   E++   +  
Sbjct: 424 TFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKTK 462


>gi|269123175|ref|YP_003305752.1| threonyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314501|gb|ACZ00875.1| threonyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 633

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/258 (10%), Positives = 70/258 (27%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K +R+ NR+    R  +   G+D I TP++   + L +         + ++ +
Sbjct: 259 GFPFFMPKGMRLFNRLQQLWRIEHNKQGYDEIRTPIMLDKE-LWEISGHWFNYRENMY-V 316

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +++            +N                  +     G     ++   
Sbjct: 317 SEIDEKVYAIKPMNCPGSIIAY-KNNLHSYKDLPLKYAEMGHVHRHEFSGALHGLMRVRA 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +      +        +  +              K          +    K  + 
Sbjct: 376 FTQDDAHVFCTPDQIKDSIKEIVNLYD------------KYYKLFGFDFHVELSTKPEKA 423

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +  ++   + +K L  + R +       G  +  +  D +         +   
Sbjct: 424 VGDAKVWEISERALEETLKELNIDYRINAGDGAFYGPKIDFKMKDSIGRIWQTGTIQLDM 483

Query: 254 ELYELVKGTIAGEKGFNE 271
            L +    +  G+ G   
Sbjct: 484 NLPKRFNMSYIGKDGEKH 501



 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/100 (11%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCPLA 432
            + P  +  M   ++ +       + L   GI +E+ +   +  G +++ A+  +  P+ 
Sbjct: 532 WLAPTQVKIMTISAEQVEYATKLHKKLIDLGIYSELDI-RDEKIGYKIREANGEQKIPVQ 590

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ++ G  E     + ++       +++ +    +     + 
Sbjct: 591 LVIGKNEVLENTVNVRRFGSTDSVTKNVDEFINELLDEIN 630


>gi|213964749|ref|ZP_03392949.1| prolyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213952942|gb|EEB64324.1| prolyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 590

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 33/111 (29%), Gaps = 1/111 (0%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L               V I     ++++    +   + L   GI          + G + 
Sbjct: 479 LDEKGLKWPVAAAPYKVHIAVAGKNAEAAEAAEQLAEDLSQQGIEVLFDDRPKVSPGVKF 538

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           K A+    P  +I G    + G +++++    +          +     V+
Sbjct: 539 KDAELLGMPFVVIFG-RGYADGKVELRNRLTNETDEVAADGIAAHVAELVS 588



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 7/79 (8%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRP 66
               G        +++   +   +R   E  G   +  P L   E  ++  ++       
Sbjct: 36  RTAPGVYSWLPLGLKVLRNVEKVVREEMEGIGAQELAFPALLPREPYEATNRWTE----Y 91

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F L+D  G    L  
Sbjct: 92  GPELFRLKDRKGADYLLGP 110


>gi|167582118|ref|ZP_02374992.1| threonyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 635

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R   +  G+  I+TP++    SL +         + +F+ 
Sbjct: 261 GMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDR-SLWEASGHWQNYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + + +  +++        +   ++               G   RNE  G   
Sbjct: 319 TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/349 (9%), Positives = 91/349 (26%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPKGWTLWQQVEQYMRRRLDAAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY I   N      + +       D                   L G+ + +     D
Sbjct: 323 KRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     + SE I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEDQINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEEGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
           +   +  ++       G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 NALKACGLEWEELPGEGAFYGPKIEYHIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +    +       +  ++         Q   Q 
Sbjct: 502 SRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPFHAV-VLNIAESQAEYAQTVVQS 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGLRVSADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|320173198|gb|EFW48409.1| Threonyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320185858|gb|EFW60609.1| Threonyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|332096305|gb|EGJ01306.1| threonyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 622

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 574 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 621



 Score = 38.7 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 351


>gi|307310711|ref|ZP_07590357.1| threonyl-tRNA synthetase [Escherichia coli W]
 gi|331647210|ref|ZP_08348304.1| threonine--tRNA ligase [Escherichia coli M605]
 gi|331673269|ref|ZP_08374037.1| threonine--tRNA ligase [Escherichia coli TA280]
 gi|281178789|dbj|BAI55119.1| threonyl-tRNA synthetase [Escherichia coli SE15]
 gi|306908889|gb|EFN39385.1| threonyl-tRNA synthetase [Escherichia coli W]
 gi|315061024|gb|ADT75351.1| threonyl-tRNA synthetase [Escherichia coli W]
 gi|315299748|gb|EFU58988.1| threonyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|323378405|gb|ADX50673.1| threonyl-tRNA synthetase [Escherichia coli KO11]
 gi|330911523|gb|EGH40033.1| threonyl-tRNA synthetase [Escherichia coli AA86]
 gi|331043993|gb|EGI16129.1| threonine--tRNA ligase [Escherichia coli M605]
 gi|331069467|gb|EGI40854.1| threonine--tRNA ligase [Escherichia coli TA280]
 gi|332343438|gb|AEE56772.1| threonyl-tRNA synthetase ThrS [Escherichia coli UMNK88]
          Length = 642

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|29840011|ref|NP_829117.1| prolyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|81838013|sp|Q824A9|SYP_CHLCV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|29834358|gb|AAP04995.1| prolyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 577

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 70/537 (13%), Positives = 154/537 (28%), Gaps = 84/537 (15%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL-PDEDRP 66
             +  +G         R+  +++D +R      G   +  P+L  ++   K    +  R 
Sbjct: 32  IFKTAKGIYTYTPLFWRVALKMMDIVREELNAIGGQELVLPILHPAELWQKTGRWEAFRS 91

Query: 67  NKGVFSLQDD----------DGQWISL-----------------------RYDLTAPLAR 93
              +++L D             + +S+                       R ++     R
Sbjct: 92  EGLLYTLTDREDKELCLAPTHEEVVSMFVSQWLSGRKQLPIHLYQIATKFRDEIRP---R 148

Query: 94  YVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFI------------QCDVDNVGSSA 140
           +        ++    T+   P   NE++   R                 + D   +G   
Sbjct: 149 FGLMRAREFLMEDSYTFSDSPEQMNEQYAKLRQAYQNIFDRLEIKYVIVEADGGKIGKGK 208

Query: 141 ETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAI 200
                 +C +  DT+   G    +    ++         E + +  +    +   +    
Sbjct: 209 SEEFHVLCSLGEDTICVSGAYGANIEAAVSQPPQYTYDKEHLPI-EEVATPDVRTMEHLQ 267

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D       + +K L+ +        F   +     QI++      ++ ++ +    E ++
Sbjct: 268 DFFSLPSHKIIKTLVVKLSYGEKDKFVAISIRGDRQINLTKIRSKLNADECILASDEELQ 327

Query: 261 GTIAGEKGF------------NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY- 307
             +  EKGF            +E          +G   ++   +    R +       + 
Sbjct: 328 QHLGTEKGFIGPLNCPIELYADETTRCMTNFICAGNTKDKHYKNVNWDRDIPRPEYGDFL 387

Query: 308 --EAILGFPVMNEKQKPVVFG-----SVGGGGRYDGLV----------SRFKGQNVPATG 350
             EA    P        V  G         G RY               +         G
Sbjct: 388 LAEAGDLCPANGNAPYEVFEGVEVAHIFNLGTRYTECFEVGFQNEQEEQQTCWMGTYGIG 447

Query: 351 FSIGISRLIVAL-KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               ++  I  L                + I     D+ S    +   + L+  G  A +
Sbjct: 448 IGRTLAACIEQLADDRGIVWPKAIAPFDIAILYNGGDAASQEAAEKIYKDLQNYGY-APL 506

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
               ++  G +LK +D    P  +I G   ++ G+L+I+     ++   E K+  +W
Sbjct: 507 LDDRNERLGFKLKDSDLIGIPYKLILGKTFQNSGVLEIES-RSREKFFVEPKDFFNW 562


>gi|331014483|gb|EGH94539.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 194

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 8/128 (6%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARY 94
            I+   G +    P L   D+  +     +     +++  D  G+   L  + TA     
Sbjct: 9   AIFIAAGAEEAIVPALWGQDTFIEKAGGSEIIG-QMWAFNDKAGRACCLIPEATA----L 63

Query: 95  VAEN---FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
             E              + +   +R E+   GR+R+F Q  ++ +G S + +      + 
Sbjct: 64  FQERSELLLNGRCEALFFYVARCYRYERPQAGRYREFTQLGLEILGPSPQQSLLRSQAIC 123

Query: 152 ADTLEAVG 159
              L+++G
Sbjct: 124 TGFLDSLG 131


>gi|261883755|ref|ZP_06007794.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 225

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/145 (8%), Positives = 50/145 (34%), Gaps = 3/145 (2%)

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           G  D    R +   +           + + L+                +  +   ++   
Sbjct: 84  GYIDENNERKQPVMLHRAIMGSFERFIGILLEHTAGELPFWIAPTQ--VVIIPISNEHHK 141

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                  +L    + +E+    ++    +++ A+++  P+ I+ G  E +   + ++D  
Sbjct: 142 YANEVHSLLLDMDVDSEI-FNKNETLNKKIRTAEKQRVPMIIVLGDNEVTNRGVALRDRR 200

Query: 452 KGKELSREIKNNESWREARVAQITI 476
             ++    +     + ++++ ++ I
Sbjct: 201 AREQKDMSLDEFLGFIQSKLNEVNI 225


>gi|159900080|ref|YP_001546327.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|226701298|sp|A9B562|SYP_HERA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|159893119|gb|ABX06199.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 566

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 8/109 (7%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          + +  +   +          Q L  AG+   ++   +++ G +  
Sbjct: 456 DEKGIVWPASVAPFDLHLVQLGASATVSEAANQLYQQLSEAGLSV-LYDDRNESAGVKFN 514

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKG-------KELSREIKNNE 464
            AD    PL +  G     + +++++  A G        ++ + IKN E
Sbjct: 515 DADLLGMPLRLTVGERGLKQNVVELRQRATGVVETIALDQVVKSIKNIE 563



 Score = 40.2 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R+  RI   +       G     TP++ ++ SL +      +  + +    + +
Sbjct: 42  LLPLGMRVFRRIEAIMHAELAAIGAGEFRTPVV-HAASLWEQTGRYAQYGEAMLRFNNRN 100

Query: 78  GQWI 81
            Q +
Sbjct: 101 QQAL 104


>gi|117164481|emb|CAJ88027.1| putative threonyl tRNA synthetase [Streptomyces ambofaciens ATCC
           23877]
          Length = 411

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R  + + IR      G+  + +P+L   +   +        +  +F  
Sbjct: 26  GLPYWLPDGAAVRYSLEEYIRAAERRAGYRHVYSPVLGKRELY-EISGHWAHYSDDMFPP 84

Query: 74  QDDDGQWISLRYDLTA 89
            D  G+ + LR  L  
Sbjct: 85  MDLGGEQVVLRPSLCP 100


>gi|300818358|ref|ZP_07098568.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300821407|ref|ZP_07101554.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300525910|gb|EFK46979.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300528998|gb|EFK50060.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|323158484|gb|EFZ44500.1| threonyl-tRNA synthetase [Escherichia coli E128010]
 gi|323175213|gb|EFZ60827.1| threonyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180497|gb|EFZ66042.1| threonyl-tRNA synthetase [Escherichia coli 1180]
 gi|323186265|gb|EFZ71617.1| threonyl-tRNA synthetase [Escherichia coli 1357]
          Length = 622

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 574 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 621



 Score = 38.7 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 351


>gi|282877699|ref|ZP_06286514.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281300271|gb|EFA92625.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 654

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/415 (11%), Positives = 114/415 (27%), Gaps = 33/415 (7%)

Query: 63  EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVF---RNEK 119
            DR  KG+       G  + LR          + E    I        +       +N  
Sbjct: 258 SDRVGKGMPIWL-PKGTELRLR----------LQEMLRKIQKRFGYQEVITPHIGSKNLY 306

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
              G +  + +     + +  +  +  +  M       V   +   +  +  R    G +
Sbjct: 307 VTSGHYAHYGKDSFQPIHTPEDDEEYMLKPMNCPHHCEVFACKPRSYKDLPLRIAEFGTV 366

Query: 180 EKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
            +    G+     R+      D         VK             FT            
Sbjct: 367 YRYEKSGELHGLTRVRSFTQDDAHIFCRPDQVKNEFLRVMDIIQAVFT------------ 414

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGE-KGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + +F + + + S+ +  +  K   + E    +E  +I     K          ++     
Sbjct: 415 IFNFDNFEAQISLRDPNDKEKYIGSDEVWAESEQAIIEACKEKGLDAKVAYGEAAFYGPK 474

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           L++              +           +      +   +       P   F       
Sbjct: 475 LDFMVKDAIGRRWQLGTIQVDYNLPQRFKLEYTAEDNTKQTPVMVHRAP---FGSLERFT 531

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            V ++              V I  +          Q   +      IRA +    ++  G
Sbjct: 532 AVLIEHTAGHFPLWLTPEQVAILPIS--EKFNGYAQQVVKYFTEQDIRATID-DRNEKIG 588

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +++  + +  P  +I G  E + G++ ++    G++ + ++++  +     V++
Sbjct: 589 RKIRDNELKRVPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMEDFAARINNEVSE 643



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           +G      K   +R R+ + +R I + +G+  + TP +   +      
Sbjct: 263 KGMPIWLPKGTELRLRLQEMLRKIQKRFGYQEVITPHIGSKNLYVTSG 310


>gi|256832247|ref|YP_003160974.1| prolyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256685778|gb|ACV08671.1| prolyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 594

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 31/110 (28%), Gaps = 2/110 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            S   +         V +     D+      +   Q L   G+          + G + K
Sbjct: 480 DSQGLAWPIQVAPAHVHLVATGKDARIFEAAESLAQRLSDRGVEVIYDDRVKVSPGVKFK 539

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    P  ++ G      G ++ +    G+     I +        VA
Sbjct: 540 DAELFGVPFIVVVG-RGLDEGTIEFRT-RVGEPQQVHINDAVDVVTDAVA 587



 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ +++   +R   E  G   +  P L   +               +F L
Sbjct: 40  GIYSWLPLGLRVLDKVDAVVREEMERAGAQRVHFPALLPREPYEA-TGRWTEYGPNLFRL 98

Query: 74  QDDDGQWISLRY 85
           QD       L  
Sbjct: 99  QDRKDGDYLLAP 110


>gi|227885859|ref|ZP_04003664.1| threonine--tRNA ligase [Escherichia coli 83972]
 gi|300898493|ref|ZP_07116830.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300917719|ref|ZP_07134368.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300930805|ref|ZP_07146177.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300951319|ref|ZP_07165163.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300958608|ref|ZP_07170733.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301050944|ref|ZP_07197793.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301647910|ref|ZP_07247687.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|227837432|gb|EEJ47898.1| threonine--tRNA ligase [Escherichia coli 83972]
 gi|300297398|gb|EFJ53783.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300314733|gb|EFJ64517.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300357845|gb|EFJ73715.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300415120|gb|EFJ98430.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300449416|gb|EFK13036.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300461363|gb|EFK24856.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|301073967|gb|EFK88773.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|312946320|gb|ADR27147.1| threonyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313649261|gb|EFS13695.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|315618916|gb|EFU99499.1| threonyl-tRNA synthetase [Escherichia coli 3431]
 gi|323169354|gb|EFZ55030.1| threonyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323186901|gb|EFZ72219.1| threonyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|324007092|gb|EGB76311.1| threonyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|332090644|gb|EGI95739.1| threonyl-tRNA synthetase [Shigella boydii 5216-82]
 gi|332093917|gb|EGI98970.1| threonyl-tRNA synthetase [Shigella dysenteriae 155-74]
 gi|332759227|gb|EGJ89536.1| threonyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332762542|gb|EGJ92807.1| threonyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332767218|gb|EGJ97413.1| threonyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333018198|gb|EGK37500.1| threonyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 622

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 574 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 621



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 351


>gi|121605747|ref|YP_983076.1| threonyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|166225475|sp|A1VR77|SYT_POLNA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120594716|gb|ABM38155.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas
           naphthalenivorans CJ2]
          Length = 635

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/258 (11%), Positives = 69/258 (26%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y+N G+  ++ P L    +L +     D+    +F+ 
Sbjct: 261 GLVFWHPKGWTVWQGVEQYMRKVYQNNGYQEVKGPQL-LDKTLWEKTGHWDKYRDNMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKRDFALKPMNCPG-------HILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +       L+              +    + I +          ++ 
Sbjct: 372 IMRVRGFTQDDGHIFCTEEQILKECVDYTTLLQKVYTDFGFKNIIYKVATRPEARIGSDE 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                + DK +   ++ ++    E           G  +     D +         +   
Sbjct: 432 -----SWDKAEHALIESLRASGCEFEISPGEGAFYGPKIEYTLKDAIGRQWQCGTIQVDF 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 487 SMPERLDAEYVGEDGARH 504



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 39/115 (33%), Gaps = 3/115 (2%)

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + ++    +         V + T+          +   + L+  G+R  + L  ++    
Sbjct: 523 ILIEEHAGALPTWLAPEQVSVLTI--TDSQAEYARGVAKTLQNQGLRVNLDL-RNEKITY 579

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +++    +  P  ++ G  E + G + ++           ++       + +AQ 
Sbjct: 580 KIREHSLQKLPFILVVGDKEMAAGAVSVRARGNKDLGVMSLEAFAERIASDIAQK 634


>gi|258423993|ref|ZP_05686875.1| glycyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845614|gb|EEV69646.1| glycyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 463

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/187 (8%), Positives = 45/187 (24%), Gaps = 3/187 (1%)

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
               K            +   ++         E  +     +      Y    S    + 
Sbjct: 279 DIEYKFPFGWGELWGIASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGADRV 338

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
             A          +   K   +  +    + P     +        +     + L ++  
Sbjct: 339 TLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQL-SSKF 397

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              +    S++ G + +  D    P  +           + ++D    +++   I   E+
Sbjct: 398 S--IDFDESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEA 455

Query: 466 WREARVA 472
           +   +  
Sbjct: 456 FLTEKTK 462


>gi|186477394|ref|YP_001858864.1| prolyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|226699127|sp|B2JHD3|SYP_BURP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|184193853|gb|ACC71818.1| prolyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 578

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPIGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEKYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQSDFVIGPTHEEVVTDIARGQIKSYRQLPVNFYQVQTK 138


>gi|82751168|ref|YP_416909.1| glycyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123768505|sp|Q2YT14|SYG_STAAB RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|82656699|emb|CAI81126.1| glycyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 463

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/187 (8%), Positives = 45/187 (24%), Gaps = 3/187 (1%)

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
               K            +   ++         E  +     +      Y    S    + 
Sbjct: 279 DIEYKFPFGWGELWGIASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGADRV 338

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
             A          +   K   +  +    + P     +        +     + L ++  
Sbjct: 339 TLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQL-SSKF 397

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              +    S++ G + +  D    P  +           + ++D    +++   I   E+
Sbjct: 398 S--IDFDESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEA 455

Query: 466 WREARVA 472
           +   +  
Sbjct: 456 FLTEKTK 462


>gi|15924555|ref|NP_372089.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927145|ref|NP_374678.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283246|ref|NP_646334.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49483813|ref|YP_041037.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486400|ref|YP_043621.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651958|ref|YP_186462.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87161756|ref|YP_494220.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195373|ref|YP_500177.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268049|ref|YP_001246992.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394117|ref|YP_001316792.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221680|ref|YP_001332502.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979883|ref|YP_001442142.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509793|ref|YP_001575452.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140015|ref|ZP_03564508.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253314936|ref|ZP_04838149.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732218|ref|ZP_04866383.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733185|ref|ZP_04867350.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|255006351|ref|ZP_05144952.2| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257425690|ref|ZP_05602114.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428351|ref|ZP_05604749.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430988|ref|ZP_05607368.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433676|ref|ZP_05610034.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436590|ref|ZP_05612634.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257793641|ref|ZP_05642620.1| glycyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258411059|ref|ZP_05681339.1| glycyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420137|ref|ZP_05683092.1| glycyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258437397|ref|ZP_05689381.1| glycyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443603|ref|ZP_05691942.1| glycyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446810|ref|ZP_05694964.1| glycyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448724|ref|ZP_05696836.1| glycyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258450606|ref|ZP_05698668.1| glycyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258453541|ref|ZP_05701519.1| glycyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262049140|ref|ZP_06022017.1| glycyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051164|ref|ZP_06023388.1| glycyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203193|ref|YP_003282462.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893066|ref|ZP_06301300.1| glycyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282904147|ref|ZP_06312035.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282905974|ref|ZP_06313829.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908884|ref|ZP_06316702.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911203|ref|ZP_06319005.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914372|ref|ZP_06322158.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282916835|ref|ZP_06324593.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282919341|ref|ZP_06327076.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282920114|ref|ZP_06327839.1| glycyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282924666|ref|ZP_06332334.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282928198|ref|ZP_06335803.1| glycyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|283770641|ref|ZP_06343533.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283958329|ref|ZP_06375780.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024624|ref|ZP_06379022.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|293503446|ref|ZP_06667293.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510463|ref|ZP_06669169.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293531003|ref|ZP_06671685.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|294848596|ref|ZP_06789342.1| glycyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295406688|ref|ZP_06816493.1| glycyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295428143|ref|ZP_06820775.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296275813|ref|ZP_06858320.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207716|ref|ZP_06924151.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245730|ref|ZP_06929595.1| glycyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297590891|ref|ZP_06949529.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300911797|ref|ZP_07129240.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380846|ref|ZP_07363506.1| glycyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54039670|sp|P67035|SYG_STAAW RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|54039676|sp|P99129|SYG_STAAN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|54042030|sp|P67034|SYG_STAAM RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|56749385|sp|Q6G902|SYG_STAAS RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|56749414|sp|Q6GGD5|SYG_STAAR RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|71153560|sp|Q5HFJ5|SYG_STAAC RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|123291788|sp|Q2FY08|SYG_STAA8 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|123749609|sp|Q2FGF8|SYG_STAA3 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|166227939|sp|A7X2W2|SYG_STAA1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|172048905|sp|A6QHA8|SYG_STAAE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|189082278|sp|A6U237|SYG_STAA2 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|189082279|sp|A5IT93|SYG_STAA9 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|189082280|sp|A8Z4A4|SYG_STAAT RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|13701363|dbj|BAB42657.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247336|dbj|BAB57727.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204686|dbj|BAB95382.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49241942|emb|CAG40637.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49244843|emb|CAG43304.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57286144|gb|AAW38238.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87127730|gb|ABD22244.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202931|gb|ABD30741.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147741118|gb|ABQ49416.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946569|gb|ABR52505.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374480|dbj|BAF67740.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722018|dbj|BAF78435.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368602|gb|ABX29573.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724007|gb|EES92736.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728725|gb|EES97454.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257271384|gb|EEV03530.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275192|gb|EEV06679.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278418|gb|EEV09054.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281769|gb|EEV11906.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257283941|gb|EEV14064.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257787613|gb|EEV25953.1| glycyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840209|gb|EEV64673.1| glycyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843848|gb|EEV68242.1| glycyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848602|gb|EEV72590.1| glycyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851009|gb|EEV74952.1| glycyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854385|gb|EEV77334.1| glycyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858002|gb|EEV80891.1| glycyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257861764|gb|EEV84563.1| glycyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257864272|gb|EEV87022.1| glycyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160801|gb|EEW45821.1| glycyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162809|gb|EEW47374.1| glycyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075483|gb|ACY11456.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941055|emb|CBI49439.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282313501|gb|EFB43896.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317151|gb|EFB47525.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282319322|gb|EFB49674.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282321553|gb|EFB51878.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282324898|gb|EFB55208.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327148|gb|EFB57443.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331266|gb|EFB60780.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282590005|gb|EFB95087.1| glycyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594462|gb|EFB99447.1| glycyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282595765|gb|EFC00729.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282764384|gb|EFC04510.1| glycyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283460788|gb|EFC07878.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283470843|emb|CAQ50054.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
 gi|283790478|gb|EFC29295.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817247|gb|ADC37734.1| Glycyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|290920271|gb|EFD97337.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095112|gb|EFE25377.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466827|gb|EFF09347.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|294824622|gb|EFG41045.1| glycyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968435|gb|EFG44459.1| glycyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295128501|gb|EFG58135.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296887733|gb|EFH26631.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177381|gb|EFH36633.1| glycyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297575777|gb|EFH94493.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300886043|gb|EFK81245.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333241|gb|ADL23434.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302751396|gb|ADL65573.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304340573|gb|EFM06507.1| glycyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312829953|emb|CBX34795.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315129843|gb|EFT85833.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315195467|gb|EFU25854.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315198740|gb|EFU29068.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140550|gb|EFW32404.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144087|gb|EFW35856.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323440463|gb|EGA98175.1| glycyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323443237|gb|EGB00855.1| glycyl-tRNA synthetase [Staphylococcus aureus O46]
 gi|329727248|gb|EGG63704.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329728442|gb|EGG64879.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329733064|gb|EGG69401.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 463

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/187 (8%), Positives = 45/187 (24%), Gaps = 3/187 (1%)

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
               K            +   ++         E  +     +      Y    S    + 
Sbjct: 279 DIEYKFPFGWGELWGIASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGADRV 338

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
             A          +   K   +  +    + P     +        +     + L ++  
Sbjct: 339 TLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQL-SSKF 397

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              +    S++ G + +  D    P  +           + ++D    +++   I   E+
Sbjct: 398 S--IDFDESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEA 455

Query: 466 WREARVA 472
           +   +  
Sbjct: 456 FLTEKTK 462


>gi|323968488|gb|EGB63894.1| threonyl-tRNA synthetase [Escherichia coli M863]
          Length = 642

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 IWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|313633402|gb|EFS00238.1| prolyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 568

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G             +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLTLRKIETIIREELEAVGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   +  + 
Sbjct: 153 REFIMKDAYSFHATNESLDEVYDLMHQAYSNIFTRCGLEFRSVIADSGSIGGKETQEFVA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   +  K      + I  +V+FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANVEMAPV-LHMEKKSHELEKELEKVTTPDQKTIADIVTFLE 271

Query: 246 IDLEKSMHEL 255
           + +EK+M  +
Sbjct: 272 VPIEKTMKSM 281



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +   Q L+ AG    +   S +  G +   AD  
Sbjct: 464 WDKKISPFDLHLIPVNMKSEEQVAFAETLYQSLQQAGFSVLIDDRSERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDEL 557


>gi|261855252|ref|YP_003262535.1| prolyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261835721|gb|ACX95488.1| prolyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 568

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   +R   E  G   +  P ++ ++ L +      + 
Sbjct: 31  MIRRLASGLYTWSPLGLRVLRKVEAVVREEMEGIGALELLMPAIQPAE-LWQESGRWQKY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +  ++D   +   +  
Sbjct: 90  GPELLRVKDRHDREFCVGP 108


>gi|161524952|ref|YP_001579964.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350300|ref|YP_001945928.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687005|sp|A9ABF9|SYT_BURM1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160342381|gb|ABX15467.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334322|dbj|BAG43392.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 635

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +   ++               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 34/349 (9%), Positives = 93/349 (26%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPKGWALWQQVEQYMRRRVNEAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY I   N      + +       D                   L G+ + +     D
Sbjct: 323 KRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     + +E I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEEQIIAESIAFNKLAMSVYRDFGFDHIDIKLSLRPEQRMGSDETWDRAEQGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
               +  ++       G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 EALTACGLQWEELPGEGAFYGPKIEYHIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +    +  + PV    ++     +   Q   Q 
Sbjct: 502 SRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVW-LAPVQAVVLNIAESQVEYAQSLAQT 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGLRVTADL-RNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVR 608


>gi|30021908|ref|NP_833539.1| prolyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|81433856|sp|Q819Y4|SYP1_BACCR RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|29897464|gb|AAP10740.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 566

 Score = 53.7 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ +K +  +
Sbjct: 272 IEADKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|313638094|gb|EFS03361.1| prolyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 568

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G             +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLTLRKIETIIREELEAVGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   +  + 
Sbjct: 153 REFIMKDAYSFHATNESLDEVYDLMHQAYSNIFTRCGLEFRSVIADSGSIGGKETQEFVA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   +  K      + I  +V+FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANVEMAPV-LHMEKKSHELEKELEKVTTPDQKTIADIVTFLE 271

Query: 246 IDLEKSMHEL 255
           + +EK+M  +
Sbjct: 272 VPIEKTMKSM 281



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +   Q L+ AG    +   S +  G +   AD  
Sbjct: 464 WDKKISPFDLHLIPVNMKSEEQVAFAETLYQSLQQAGFSVLIDDRSERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDEL 557


>gi|228960035|ref|ZP_04121699.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799551|gb|EEM46504.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 566

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ +K +  +
Sbjct: 272 IEADKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|187736219|ref|YP_001878331.1| threonyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426271|gb|ACD05550.1| threonyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 630

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 48/460 (10%), Positives = 104/460 (22%), Gaps = 59/460 (12%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   IR  + D I    +  G+  + TP +   D   +         +  +      
Sbjct: 227 WKPKGALIRRSLQDFITEELDKLGYSQVYTPNIGKLDLY-RTSGHFPYYQESQY------ 279

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                      AP+    A    +            +      G           +    
Sbjct: 280 -----------APIPERDAMEKLSQEGASCAELFNGLATGTIEGYMLKPMNCPHHIKIYA 328

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           + A +       +          +  +       R                    R  + 
Sbjct: 329 NDAHSYRDLPVRLAEFGTVYRWEQSGELGGMTRVRGFTQDDAHIFCTPDQLAGEIRQCLG 388

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
                    G+   ++ L     D   D   G+    ++ +           +++ E  E
Sbjct: 389 IVKTIFGTLGMTDYRVRLS--MRDPESDKYVGSPENWDKAE-----------QALREAAE 435

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            +    + E G                      +   I R  +  T    +     P   
Sbjct: 436 WLGADYSEEAGEA----------AFYGPKIDFIVRDAIGREWQLGT---VQVDYNLPERF 482

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           +                D    R    +    G         + ++  E           
Sbjct: 483 DLHYTGA----------DNKPHRPVMVHRAPFGSM--ERFTGLLIEHFEGKFPTWLSPEQ 530

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +      ++         R  G+R  +     K  G +++ A     P  ++ G 
Sbjct: 531 VRVLPISDKVTDVAAAHRTALAAR--GVRVTVDETPDK-IGAKIRNARLDRVPYMLVLGQ 587

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
            E   G + ++   KG   +   +         +A+  I 
Sbjct: 588 REAEDGTVSVRHRDKGDLGAMPFEQFADLVAREIAERHIS 627


>gi|32307624|gb|AAP79217.1| threonyl-tRNA synthetase [Bigelowiella natans]
          Length = 147

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D     +   +  +  GIRAE+     +  G  ++ A+    P+  
Sbjct: 43  WLSPVQLKVLPVTDDFRPFCEDVVKKAKALGIRAEIDSSDDR-LGKMIRNAELEKIPVVA 101

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E     L I+    G   S  +++        + 
Sbjct: 102 VVGQKEIDSNQLAIRTRKGGDLGSFAVEDLIEKLSDAIK 140


>gi|309776920|ref|ZP_07671890.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915331|gb|EFP61101.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 580

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 45/131 (34%), Gaps = 2/131 (1%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              V +  +      L       + L   G R
Sbjct: 452 HRVIFGSIERFIGILIEHFAGHFPVWLAPQQVSVVPVH-HEKHLEYANEVNEKLLALGYR 510

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +++    ++  G +++ A     P  ++ G GE   G + ++     K L+  +++  + 
Sbjct: 511 SKLD-ARNEKLGYRIREAQLSKIPYQLVIGDGEIENGSVTLRRAQSKKSLTMPLEDFIAM 569

Query: 467 REARVAQITIP 477
             + V + T+ 
Sbjct: 570 MNSAVEEKTLS 580



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + IRN + +     +    +  I+TP++   + L +     +   + +++ 
Sbjct: 203 GMPFFLPNGMIIRNLLENFWYEEHTKENYQFIKTPIMMSKE-LWEVSGHWENYKENMYTT 261

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 262 M-VDDREFAIKPMNCPG 277


>gi|294901580|ref|XP_002777422.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239885058|gb|EER09238.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 836

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/459 (8%), Positives = 109/459 (23%), Gaps = 40/459 (8%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             I N+++D IR  Y   GFD + TP + +S++L +           ++S+  +   W  
Sbjct: 376 AVIYNKLVDFIRREYRLRGFDEVITPNI-FSEALFQQSGHCGNYKDNMYSMNIEGETWY- 433

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           L+            +   +            V    +                  +    
Sbjct: 434 LKPMNCPGHCMIFDQKVRSYKELPIRMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFC 493

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
              ++   +   LE +    N +    +             +    +  + +      D 
Sbjct: 494 RPDQVQDEITHALEFLKFVYNTFGFDFS-------------VCLSTRPKKAIGSRAIWDT 540

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
            +      ++    +   +       G  +     D +  +        +     +    
Sbjct: 541 AENGLKNALEACGIDYDLNPGDGAFYGPKIDIRLRDALNRYHQ-CGTIQLDFNLPIRFNL 599

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                   E      +   +   ++                     A +       K   
Sbjct: 600 QYRTAETEESGDAHSVSEAANSPAD-----------DHQEKAGQNSAAVENVGSKAKADE 648

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
           +  G +  G          +   V             +  +              V++  
Sbjct: 649 ITLGELKHG--------FERPVMVHRAILGSIERCTAILTEHYGGKWPFWLSPRQVMVVP 700

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +       + Y    + L   G  A+  L S++    +++ A         + G  E++ 
Sbjct: 701 VSDKYSDYADYLR--KQLVRLGYEADADL-STRTMNKKVREAQVAAYNYIAVVGEKEQND 757

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             + ++                   +    +  +   +L
Sbjct: 758 LTVTLRKRDT--VRPLGTFGIAEMLDMFEKESEVNSDDL 794


>gi|259502210|ref|ZP_05745112.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169828|gb|EEW54323.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 600

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/363 (9%), Positives = 94/363 (25%), Gaps = 20/363 (5%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +           +   + +      +  + D+       +    E+  M  
Sbjct: 233 RYIIDR--EVADGYEHVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLEIRPMNC 290

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
            +   +       +  +  R    G++ +    G     +R+  +   D      +  ++
Sbjct: 291 PSHIQIYKHHIRSYRDLPMRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVAVDQIR 350

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +        +             +  +      +      +        ++    L
Sbjct: 351 DEFAKILNLIMDVYKDF---------DITDYSFRLSLRDPKNKEKYYGNDEMWDESQKLL 401

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               + +    Y +     ++     L+  T       LG        +         G 
Sbjct: 402 KAAMDDLNLDYYEAEG--EAAFYGPKLDIQTKTA----LGNDETMSTIQLDFMQPDRFGL 455

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G   +     +   G    + R +  L  +             +      D      
Sbjct: 456 SYVGKDGKEHMPVMIHRGIVGTMERFVAYLTEIYKGAFPTWLAPEQVHIIPVSDEKHGDY 515

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     ++ A IR  +    ++  G +++ A  +  P  ++ G  E     + ++    
Sbjct: 516 AKQLADKMKAAQIRVVVD-DRNEKMGYKIREAQTQKVPYTLVVGDDEVKDNAVSVR--KY 572

Query: 453 GKE 455
           G+E
Sbjct: 573 GEE 575



 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 74/262 (28%), Gaps = 14/262 (5%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  R + +  G++ + TP+L   D+  K     +     +F
Sbjct: 216 GLPYWMPKGATIRRTIERYIIDREVAD--GYEHVYTPVLMNLDAY-KTSGHWEHYRDDMF 272

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
              D   G+ + +R             +        R+YR  P+   E     R+ +   
Sbjct: 273 PPMDMGDGEMLEIRPMNCPS-------HIQIYKHHIRSYRDLPMRIAELGMMHRYEKSGA 325

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                      T +     +  D +     K  +  + +     +     ++ L      
Sbjct: 326 LS-GLQRVREMTLNDGHTFVAVDQIRDEFAKILNLIMDVYKDFDITDYSFRLSLRDPKNK 384

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            +        D+  K     +  L  +           G  L  +    + +  ++   +
Sbjct: 385 EKYYGNDEMWDESQKLLKAAMDDLNLDYYEAEGEAAFYGPKLDIQTKTALGNDETMSTIQ 444

Query: 251 SMHELYELVKGTIAGEKGFNEL 272
                 +    +  G+ G   +
Sbjct: 445 LDFMQPDRFGLSYVGKDGKEHM 466


>gi|330963654|gb|EGH63914.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 194

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 8/128 (6%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARY 94
            I+   G +    P L   D+  +     +     +++  D  G+   L  + TA     
Sbjct: 9   AIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIG-QMWAFNDKAGRACCLIPEATA----L 63

Query: 95  VAEN---FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
             E              + +   +R E+   GR+R+F Q  ++ +G S + A      + 
Sbjct: 64  FQERSELLLNGRSEALFFYVARCYRYERPQAGRYREFTQLGLEILGPSPQQALLRSQAIC 123

Query: 152 ADTLEAVG 159
              L+++G
Sbjct: 124 TGFLDSLG 131


>gi|300870022|ref|YP_003784893.1| prolyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300687721|gb|ADK30392.1| prolyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 571

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 42/123 (34%), Gaps = 8/123 (6%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++     +++       +S  K +   + L   G+         +  G +L   D 
Sbjct: 457 IFPISVAPYEAIVVAIDKETEESFKKAEEIYKALSAIGVETMFDDRKER-LGVKLNDCDL 515

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ II G     RG+++ K     + +  ++++   + +A          EL   + 
Sbjct: 516 IGVPMRIIVGKKSLERGVVEFKLRRDLESVEVKLEDIVEYVKA-------KKKELFDEIN 568

Query: 487 KIL 489
             L
Sbjct: 569 SKL 571



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ N+I + IR   +  G +    P+L   + L       +R  K +F L
Sbjct: 31  GLYSYLPLGVRVLNKISNIIREEMDAIGSNECIMPILVSKELLTPS-GRWERFKKELFRL 89

Query: 74  QDDDGQWISLRY 85
           +D +   +++  
Sbjct: 90  KDRNDVDMAMGP 101


>gi|254776130|ref|ZP_05217646.1| prolyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 582

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +   + D+ + +        L   G+   +      + G + K
Sbjct: 473 DELGLRWPASVAPFDVHLVIANKDAQARAGATALADDLDRLGVEVLLD-DRQASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    P  ++ G    + G+++++D   G+
Sbjct: 532 DAELLGVPWIVVVG-RGWADGVVELRDRFAGQ 562



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 26/82 (31%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R   P G        +R+  RI   +R      G   I  P L      ++  ++    
Sbjct: 34  IRPVAP-GLYSWLPLGLRVLRRIEHIVREEMNAIGGQEILFPALLPRAPYEATNRWTEYG 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D      F LQD  G    L  
Sbjct: 93  DSV----FRLQDRRGNDYLLGP 110


>gi|118463800|ref|YP_882877.1| prolyl-tRNA synthetase [Mycobacterium avium 104]
 gi|152112931|sp|A0QIY9|SYP_MYCA1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118165087|gb|ABK65984.1| prolyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 582

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +   + D+ + +        L   G+   +      + G + K
Sbjct: 473 DELGLRWPASVAPFDVHLVIANKDAQARAGATALADDLDRLGVEVLLD-DRQASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    P  ++ G    + G+++++D   G+
Sbjct: 532 DAELLGVPWIVVVG-RGWADGVVELRDRFAGQ 562



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 26/82 (31%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R   P G        +R+  RI   +R      G   I  P L      ++  ++    
Sbjct: 34  IRPVAP-GLYSWLPLGLRVLRRIEHIVREEMNAIGGQEILFPALLPRAPYEATNRWTEYG 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D      F LQD  G    L  
Sbjct: 93  DSV----FRLQDRRGNDYLLGP 110


>gi|41409011|ref|NP_961847.1| prolyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|81831677|sp|Q73VU8|SYP_MYCPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|41397370|gb|AAS05230.1| ProS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 582

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L            V +   + D+ + +        L   G+   +      + G + K
Sbjct: 473 DELGLRWPASVAPFDVHLVIANKDAQARAGATALADDLDRLGVEVLLD-DRQASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    P  ++ G    + G+++++D   G+
Sbjct: 532 DAELLGVPWIVVVG-RGWADGVVELRDRFAGQ 562



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 26/82 (31%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R   P G        +R+  RI   +R      G   I  P L      ++  ++    
Sbjct: 34  IRPVAP-GLYSWLPLGLRVLRRIEHIVREEMNAIGGQEILFPALLPRAPYEATNRWTEYG 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D      F LQD  G    L  
Sbjct: 93  DSV----FRLQDRRGNDYLLGP 110


>gi|47569097|ref|ZP_00239786.1| prolyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47554259|gb|EAL12621.1| prolyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 566

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/250 (9%), Positives = 76/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +    +   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYDRLYKAYSNIFARCGLKFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I+ EK +  +
Sbjct: 272 IEAEKCIKSM 281



 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DESGLVWPKAVAPFHVHVIPVNMKSDAQREMGESIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|265984932|ref|ZP_06097667.1| ATP phosphoribosyltransferase regulatory subunit [Brucella sp.
          83/13]
 gi|264663524|gb|EEZ33785.1| ATP phosphoribosyltransferase regulatory subunit [Brucella sp.
          83/13]
          Length = 378

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 29 ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
          I +++R  +     + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 11 IFNALRVEFNAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 68

Query: 89 APLAR 93
           P+ R
Sbjct: 69 IPVCR 73


>gi|254719925|ref|ZP_05181736.1| ATP phosphoribosyltransferase regulatory subunit [Brucella sp.
          83/13]
 gi|306838513|ref|ZP_07471351.1| ATP phosphoribosyltransferase regulatory subunit [Brucella sp. NF
          2653]
 gi|306406380|gb|EFM62621.1| ATP phosphoribosyltransferase regulatory subunit [Brucella sp. NF
          2653]
          Length = 376

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 29 ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
          I +++R  +     + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 9  IFNALRVEFNAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 66

Query: 89 APLAR 93
           P+ R
Sbjct: 67 IPVCR 71


>gi|145593399|ref|YP_001157696.1| tRNA synthetase, class II (G, H, P and S) [Salinispora tropica
          CNB-440]
 gi|145302736|gb|ABP53318.1| tRNA synthetase, class II (G, H, P and S) [Salinispora tropica
          CNB-440]
          Length = 405

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 6/79 (7%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF-- 71
          G           R+ + + +R++    G+  + TP L   +   +     D   + +F  
Sbjct: 23 GLPLWLPAGAAARHAVEEYLRDLERQAGYQHVVTPPLGRRELFERS-GHLDHFAEEMFPP 81

Query: 72 -SLQDDDGQWISLRYDLTA 89
            L       + LR  L  
Sbjct: 82 MRLS--ADDELVLRPSLCP 98



 Score = 37.1 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             S + G +++ A +   P   + G  E + G + ++ L  G+
Sbjct: 335 DRSGSLGGRIRDAAQARIPYVAVVGPREAAAGHVLLR-LRDGQ 376


>gi|322502963|emb|CBZ38047.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 788

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 55/460 (11%), Positives = 126/460 (27%), Gaps = 33/460 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N +++ +R  Y   GF  + +P + YS  L       ++    +F  
Sbjct: 307 GSAFWLPHGTRIYNTLVEFLRKKYRRCGFQEVISPNM-YSSKLWMVSGHWEKYADNMFCT 365

Query: 74  QDDDGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG------PGRFR 126
           +  + +   L+          + ++       P R    G + RNE  G        R  
Sbjct: 366 K-CEKEDFGLKPMNCPGHCIMFASQPHSYKELPIRYADFGVLHRNELSGALTGLTRVRRF 424

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK------------- 173
           Q     +                 ++D    +G K   YH      K             
Sbjct: 425 QQDDAHIFCRMDQITDEMEGQMQFLSDVYGVLGFKFYFYHSTRPANKLGSDALWDQSESY 484

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           +   +    G+  +             D       +   L+    R ++   +    N  
Sbjct: 485 LRTALNRFCGIPEELPDPLHPDQRFHYDGKPDSVKKMKALMKKAERCEDPNAWKGPTNGG 544

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
              I+          +  +     +V+  +        + +   L  + G          
Sbjct: 545 DGWIENAGDGAFYGPKIDI-----VVEDALRRRHQCATIQLDFNLPSRFGLKYTLPAAEK 599

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQK-----PVVFGSVGGGGRYDGLVSRFKGQNVPA 348
                         +  L       +       P  + +       D  +   + + V  
Sbjct: 600 DETTVSPTEKQKHADPALTASSPAVEDCVSKPKPGTYEAAVRDLGIDLELDANQARPVMI 659

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
               +G     +A+       +    + P  +  +   + +    Q     +  AG  A+
Sbjct: 660 HRAILGSLERSIAILCEHFGGDWPFWLSPRQVMVVPVSASNYEYSQQVRDTMHDAGFHAD 719

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +  G++     +++ A++      ++ G  E+    + I+
Sbjct: 720 VDNGAA-TLDKKIRNAEKARYNFILVVGQKEQDATAVNIR 758


>gi|289434600|ref|YP_003464472.1| hypothetical protein lse_1235 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170844|emb|CBH27386.1| proS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 568

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 77/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G             +I   IR   E  G   +  P L+ ++ L +     +     
Sbjct: 34  QTASGIYSYLPLATLTLRKIETIIREELEAVGAAELLMPALQPAE-LWQESGRWNDYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  L+D   +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRLKDRASRDFALGPTHEEVITALLRDEIKSYKRLPLTLYQIQTKFRDEKRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           +   +  E+  +M      +  +   ++   I +   + G   +  L 
Sbjct: 153 REFIMKDAYSFHATNESLDEVYDLMHQAYSNIFTRCGLEFRSVIADSGSIGGKETQEFLA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +    A D      +  V L + +   +   +  K      + I  +V+FL 
Sbjct: 213 LSDIGEDTIAYSDASDYAANVEMAPV-LHMEKKSHELEKELEKVTTPDQKTIADIVTFLE 271

Query: 246 IDLEKSMHEL 255
           + +EK+M  +
Sbjct: 272 VPIEKTMKSM 281



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +   Q L+ AG    +   S +  G +   AD  
Sbjct: 464 WDKKISPFDLHLIPVNMKSEEQVAFAETLYQSLQQAGFSVLIDDRSERA-GVKFADADLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 523 GLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDEL 557


>gi|15897373|ref|NP_341978.1| glycyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284173285|ref|ZP_06387254.1| glycyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|13813596|gb|AAK40768.1| Glycyl-tRNA synthetase (glyS) [Sulfolobus solfataricus P2]
 gi|261602050|gb|ACX91653.1| glycyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 574

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 3/102 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   + +  +    + + K     + L     + E+    S + G +   AD    
Sbjct: 459 PRHLAPYDIAVFPLLEREELIRKSVEIRESLSE---KYEVLYDDSGSIGRRYARADEIGI 515

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           P AI           + I+D    K++  +I + +   E   
Sbjct: 516 PFAITVDPQTLVDNSVTIRDRDSWKQVRVKIDDLKISLEKLF 557


>gi|68062614|ref|XP_673315.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56491080|emb|CAH97018.1| hypothetical protein PB000003.02.0 [Plasmodium berghei]
          Length = 279

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPL 431
                 + ++ ++ +     +    +L    I  ++   SS + G   KYA  D    P 
Sbjct: 162 SPIKCSVLSISNNKEFYPYIKQIQTILNEHNISCKLD-NSSVSIGK--KYARTDEIGIPF 218

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           A+           + ++D     ++   I        + ++Q T
Sbjct: 219 AVTIDFQTLKDKTVTLRDRDSMVQIRVNISEVSDIINSLLSQKT 262


>gi|312437966|gb|ADQ77037.1| glycyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 463

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/187 (8%), Positives = 45/187 (24%), Gaps = 3/187 (1%)

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
               K            +   ++         E  +     +      Y    S    + 
Sbjct: 279 DIEYKFPFGWGELWGIASRTDFDLRKHGEHSGEDFRYHDPETNEKYIPYCIEPSLGADRV 338

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
             A          +   K   +  +    + P     +        +     + L ++  
Sbjct: 339 TLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQL-SSKF 397

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              +    S++ G + +  D    P  +           + ++D    +++   I   E+
Sbjct: 398 S--IDFDESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEA 455

Query: 466 WREARVA 472
           +   +  
Sbjct: 456 FLTEKTK 462


>gi|119897370|ref|YP_932583.1| threonyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166223320|sp|A1K4E1|SYT_AZOSB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119669783|emb|CAL93696.1| ThrS protein [Azoarcus sp. BH72]
          Length = 638

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/352 (10%), Positives = 95/352 (26%), Gaps = 14/352 (3%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +         +++        +   +    +    M +D +     +
Sbjct: 266 HAKGWTLWQQVEQYLRGTISRHGYQEVRT---PQIVDRSLWEKSGHWGMYSDLMFTTQSE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           ++DY +   N      I  +      D                   L G+ + +     D
Sbjct: 323 KHDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGI-MRVRNFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     +  E    +     +  +    ++   +        G +E    +E    
Sbjct: 382 DAHIFCTDEQVQEEAAAFIALLQKVYADFGFRDIQIKLSTRPEKRVGADEQWDAAEAALA 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDG 336
           +   +  ++       G  Y     +        +N   +              G  Y  
Sbjct: 442 AALKAQGLEYELQPGEGAFYGPKIEFSL---KDCLNRVWQCGTLQLDFNLPVRLGAEYVA 498

Query: 337 LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
             +  K   +        + R I  L    +    +  + PV    M+            
Sbjct: 499 EDNTKKFPVMLHRAIVGSLERFIGILIEHYAGAMPLW-LAPVHAVVMNISEGQADYATEV 557

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              LR AG R E  L  ++    +++       P  ++ G  E++ G++ ++
Sbjct: 558 VNRLREAGFRVEADL-RNEKINYKIREHSVHKLPYQLVVGEKEKAAGVVAVR 608



 Score = 46.8 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/160 (8%), Positives = 39/160 (24%), Gaps = 2/160 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R     +G+  + TP +       K        +  +F+ 
Sbjct: 261 GMVFWHAKGWTLWQQVEQYLRGTISRHGYQEVRTPQIVDRSLWEKS-GHWGMYSDLMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q  +    +++        +   +   +                 +            + 
Sbjct: 320 Q-SEKHDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIMRVRNF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
               +     D ++    A  +  +     D+       K
Sbjct: 379 VQDDAHIFCTDEQVQEEAAAFIALLQKVYADFGFRDIQIK 418


>gi|330932301|ref|XP_003303723.1| hypothetical protein PTT_16056 [Pyrenophora teres f. teres 0-1]
 gi|311320083|gb|EFQ88182.1| hypothetical protein PTT_16056 [Pyrenophora teres f. teres 0-1]
          Length = 776

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 51/478 (10%), Positives = 123/478 (25%), Gaps = 64/478 (13%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N +   +R  Y N G+  + +P + Y+ +L K           +F+  D +
Sbjct: 356 FLPHGQIIYNTLQAFLREEYWNRGYQEVGSPNM-YNSALWKISGHWQHYADDMFTF-DVE 413

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + +     
Sbjct: 414 KEKWALKPMNCPG-------------HCLIFKHRERSYRELPIRMADFGILHRNEASGAL 460

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I      +    R +         +    +    L  +
Sbjct: 461 TGLTRVRRFQQDDTHVFCTQDQITEEISALFDFLRAVYGKFGFTFKMKLSTRPEGFLGDI 520

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              DK +    + +      G +    +   GA    +    +   L  + + +  +L  
Sbjct: 521 ETWDKAEGKLTEALNQFTAAGGSAWELNPGDGAFYGPKIDITISDALKREFQCATIQLDF 580

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            +      E   +E                + K        +E     +  A +  P   
Sbjct: 581 QLPNQFELEYMTSE------------VIPVKNKDQLQEGGHIEQKKEKLEGADVTIPKKI 628

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL--ESSTNNIKEM 375
           ++ +P     V                            R I  L           +   
Sbjct: 629 KEPQPGYARPVMIHRA-----------------IYGSFERFIAILTEHFAGRWPFWLSPR 671

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
             ++I  M   +D + + Q     LR   + A++ +  +     +++ A        ++ 
Sbjct: 672 QVMIIPVMPGANDYVKEVQA---ELRKHRLHADIDISGN-TMQKKIRTAQLALYNFIMVV 727

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           G  E+    +  ++                 +E +   + +P+ E V  + ++  E +
Sbjct: 728 GAEEQQARAVNWRNRDD--------------QETQQRGVIVPLDEAVKKLVELRDERR 771


>gi|149914370|ref|ZP_01902901.1| prolyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149811889|gb|EDM71722.1| prolyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 455

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/464 (9%), Positives = 115/464 (24%), Gaps = 62/464 (13%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  ++ + +          P+  P L+ +D L +     D  
Sbjct: 31  MIKQASAGIYSWLPMGFKVLRKLENIVHEEQIRARHVPMLMPTLQPAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
            + +  ++D  G+ +       +L   + R    ++  +      Y I   FR+E     
Sbjct: 90  GEEMLRIKDRQGRDLLYGPTNEELITDIFRSHVGSYKDLP--LTLYHIQWKFRDEIRPRF 147

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +  +                               ++ Y+  +     L      + 
Sbjct: 148 GVMRGREF----------------------------FMKDGYNFDLTREDALHAYNRHLV 179

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +        L  +             ++   G    D++ +F   A      +      
Sbjct: 180 SYLRTYERMGLQAI------------PMRAESGPIGGDDTHEFLVLAETGESGVFYDSEI 227

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
             +       +   +       E+  +      +   +S ++    +      RG+E   
Sbjct: 228 TDLRFGDREIDYTSVEACQAVMEEFTSRYARTDDTHDESVFHDRVPEERRRSGRGIEVGQ 287

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA-L 362
              +      P             +G   +     +          G S  I  +I A  
Sbjct: 288 IFYFGTKYSEP-------------MGATVQDRDGNTVPVHMGSHGIGVSRLIGAIIEASH 334

Query: 363 KSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                            I  +    +++ +  +     L   G+         +  G + 
Sbjct: 335 DDRGIIWPEGVTPFHAGIVNLKTGDAEADAACEAIYASLTALGLEPLYDDTDDRA-GAKF 393

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              D    P  I  G      G++++     G+      +    
Sbjct: 394 ATMDLIGLPWRITVGPRGLKNGVVELTSRRTGESEELPPEQAVE 437


>gi|152996743|ref|YP_001341578.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1]
 gi|150837667|gb|ABR71643.1| tRNA synthetase class II (G H P and S) [Marinomonas sp. MWYL1]
          Length = 395

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 57/203 (28%), Gaps = 11/203 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           + P G          +   I + +R  Y  YGF  + TP L   + L       D   + 
Sbjct: 19  QAP-GMLFWHPNGWHLFQNIQEHMRRCYRQYGFKEVRTPQLMKKE-LWHISGHMDMYAQD 76

Query: 70  VFSLQDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           +F   + +G    +L+             +         +YR  P+   E     R    
Sbjct: 77  MFFGGEQNGDQEYALKPMSCP-------AHILMYKRGVHSYRDLPLKLFEFGLVHRNESS 129

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
              +           DA +    +   + VG         I N      +  KI    + 
Sbjct: 130 GSLNGCLRLRQFTQDDAHVFCAWSQVKQEVGQFL-QRAKQIYNDYGYQALEVKISTQPEK 188

Query: 189 KLNERLIVLRAIDKLDKFGLQGV 211
            L +     RA D L +      
Sbjct: 189 ALGDDASWRRAEDILKEACQAEN 211



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 1/77 (1%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
            + + P  +  +  +   L         L   GI      G   + G ++K +     P 
Sbjct: 296 PEWIHPQPVALVSVNDSVLDYANQLRAELEQQGINVSCEFGDH-SVGRKIKRSFELKIPN 354

Query: 432 AIIQGTGERSRGMLQIK 448
            II G  E   G L I+
Sbjct: 355 IIIIGEQEAQAGKLTIR 371


>gi|255527652|ref|ZP_05394512.1| glycyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296186917|ref|ZP_06855318.1| glycyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508665|gb|EET85045.1| glycyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048631|gb|EFG88064.1| glycyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 463

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 29/102 (28%), Gaps = 3/102 (2%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +    + PV    +        K +     LR      E     + + G + +  D   
Sbjct: 362 MHFHPAIAPVKAAILPLTKKLSEKAEEVYDELRK-DFNVE--YDEAGSIGKRYRRQDEAG 418

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            P  I           + ++D     +   ++   + + + +
Sbjct: 419 TPYCITIDFDTLEDNTVTVRDRDTMDQFRMKVDELKKFIKEK 460


>gi|145246120|ref|XP_001395309.1| glycyl-tRNA synthetase 1 [Aspergillus niger CBS 513.88]
 gi|134080022|emb|CAK41069.1| unnamed protein product [Aspergillus niger]
          Length = 667

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 48/123 (39%), Gaps = 6/123 (4%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VLI  +    D +   +  T+ LR  GI       SS + G   +YA  D    PL 
Sbjct: 549 PTKVLIVPLSTHQDFVPITKRITEDLRELGISC-RADESSASIGK--RYARNDELGIPLG 605

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
           I         G + +++    K++    +      E+ ++   +   ++ + + + L ++
Sbjct: 606 ITIDFDSVKDGTITLRERDSTKQVRASKEEILGAIESLISGK-MNWEDVFARLPEFLGQS 664

Query: 493 KEE 495
            ++
Sbjct: 665 GDD 667


>gi|330507458|ref|YP_004383886.1| threonyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928266|gb|AEB68068.1| threonyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 621

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 45/189 (23%), Gaps = 6/189 (3%)

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
               ++    LV I +          R              T     A+    +  E  +
Sbjct: 390 YKENQEFIAGLVDIIKKPVLIEMWDERFFYFVLKFEFNFVDTMDKASALSTVQIDVENAE 449

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                 +   G     +      +         I      L            + P  + 
Sbjct: 450 RYDINYIDESGARRRPILLHCSPSGAIERVMYAILEKAARLSLQGKLPMLETWLSPTQVR 509

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +        +      +L   G R ++     +  G +++ A R   P   + G  E  
Sbjct: 510 IIPVAERHQERALALAGIL---GFRTDID-DRDETVGKKIRDAGREWVPYVAVIGDEELQ 565

Query: 442 RG--MLQIK 448
            G   + I+
Sbjct: 566 SGRLAVTIR 574


>gi|251810982|ref|ZP_04825455.1| glycyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876009|ref|ZP_06284876.1| glycine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251805492|gb|EES58149.1| glycyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295034|gb|EFA87561.1| glycine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 463

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/219 (9%), Positives = 51/219 (23%), Gaps = 4/219 (1%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E    +  +    +  +                   K            +   Y+     
Sbjct: 248 EWLTDLNISEDNMRLRDHDEDELSHYSN-ATTDIEYKFPFGWGELWGIASRTDYDLRQHS 306

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               E  K     +      Y    S    +   A          +   K   +  +   
Sbjct: 307 EHSGEDFKYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYAEEGVEGSKDARTVMHFHP 366

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P     +       S+     + L +      +    S++ G + +  D    P  I
Sbjct: 367 ALAPYKAAVLPLSKKLSSEAIKIFEQLSS---SFAIDFDESQSIGKRYRRQDEIGTPYCI 423

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + ++D    +++   I   E++   +V 
Sbjct: 424 TFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAEKVK 462


>gi|254468875|ref|ZP_05082281.1| threonyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087685|gb|EDZ64968.1| threonyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 652

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/160 (8%), Positives = 45/160 (28%), Gaps = 2/160 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I + +R  + +YG+  I+TP +    +L +     +  ++ +F  
Sbjct: 278 GMVFWHAKGWSLWQEIENYMRKKFVDYGYQEIKTPTV-LDKTLWEKSGHWENYHENMFIT 336

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +  +  +++        +    +  +                 +              
Sbjct: 337 HSEH-RDYAVKPMNCPGHVQIFNHSLHSYRELPLRLAEFGSCHRNEPSGALHGLMRVRGF 395

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
               +     + ++   + +  + +     D+       K
Sbjct: 396 TQDDAHIFCTEDQILDEVINFNKMLMETYKDFGFNDIEVK 435



 Score = 41.0 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 41/146 (28%), Gaps = 5/146 (3%)

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
             Y    S  K   +        + R I  L    +       + PV    M+       
Sbjct: 511 AEYVDENSNKKHPVMLHRAIVGSMERFIGILIEHYAGKFP-TWLAPVQAVVMNISDSQAK 569

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                   L+   IR E  L  ++    +++       P  ++ G  E     + ++   
Sbjct: 570 YVGDVVDFLKKNDIRCESDL-RNEKITYKIREHSISRIPFMLVIGDREMQNKQVAVR--- 625

Query: 452 KGKELSREIKNNESWREARVAQITIP 477
             +     +   E + E    QIT  
Sbjct: 626 TQQGEDLGVMTLEEFVETMNTQITAK 651


>gi|91773300|ref|YP_565992.1| threonyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121684342|sp|Q12WD4|SYT_METBU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91712315|gb|ABE52242.1| Threonyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 635

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/186 (10%), Positives = 42/186 (22%), Gaps = 4/186 (2%)

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                +   EL    +          R                    A+    +  E  +
Sbjct: 404 YDDNREFITELAKKVDKPVLVEMWDTRFFYFVLKFEFNFVDAIAKASALSTVQIDVENAE 463

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                 V   G+ +         +         +              N    + P  + 
Sbjct: 464 RYDINYVDANGKINRPTILHCSPSGAIERCIYALLEKAAMDAEEGKVPNLPVWLSPTQVR 523

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +      +   Q     L     RA++     +  G +++ A R   P   + G  E  
Sbjct: 524 VIPIAERHMDFAQEVADSLL---CRADIDDRE-ETVGKKIRDAGREWIPYVAVIGDSEVE 579

Query: 442 RGMLQI 447
            G + +
Sbjct: 580 SGKVTV 585


>gi|116630042|ref|YP_815214.1| threonyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|238853770|ref|ZP_04644136.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282851336|ref|ZP_06260701.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110329|ref|ZP_07711726.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273021|sp|Q041U6|SYT_LACGA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|116095624|gb|ABJ60776.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactobacillus
           gasseri ATCC 33323]
 gi|238833579|gb|EEQ25850.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282557304|gb|EFB62901.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311065483|gb|EFQ45823.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 643

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 46/137 (33%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++    + 
Sbjct: 499 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNEEAHGAY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + L   G RAE+    ++  G +++ +  +  P  ++ G  E +   + ++    
Sbjct: 559 ADKVREELAKRGFRAEVDH-RNEKLGYKIRESQTQKVPYTLVLGDDEMNANGVNVRRYGT 617

Query: 453 GKELSREIKNNESWREA 469
            +++S+ + +  +  +A
Sbjct: 618 EEQISKSLDDFIAEIDA 634



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 55/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  + + +  G++ + TP+L   D+  K           +F
Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVAD--GYEHVYTPVLMNVDAY-KTSGHWAHYRDDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 375

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                    A++  ++ D  +   I    + +   + K  D       
Sbjct: 376 REMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDYYFRLSYRDPKNTDKYYANDE 435

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 436 MWEKSQSM 443


>gi|320451414|ref|YP_004203510.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151583|gb|ADW22961.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 659

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 33/88 (37%), Gaps = 1/88 (1%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                  +     L+ AG+RAE  L   +    +++ A+ +  P  ++ G  E++ G + 
Sbjct: 567 EKQEDYAKEVVFKLKEAGLRAEADLRPER-MQARIRDAEVQKVPYVLVVGDREKAEGTVS 625

Query: 447 IKDLAKGKELSREIKNNESWREARVAQI 474
           ++   +G   S  +            + 
Sbjct: 626 VRRRHRGNLGSMPLAAFLEAALKEYKER 653



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 37/115 (32%), Gaps = 6/115 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
           +G      K   IR  ++  +R      G+  + TP +   +   +         +  F 
Sbjct: 271 KGLVLWLPKGNVIREELMAFMREEQIRRGYQLVTTPHIGSLELY-RTSGHYPYYAESQFP 329

Query: 72  --SLQDDD-GQWISLRYDLTAPLARYVA-ENFDTIVFPCRTYRIGPVFRNEKHGP 122
             S ++    +   L+        R  A +       P R    G V+R EK G 
Sbjct: 330 PISFKERGEEEEYLLKPMNCPHHIRIYAFKKRSYRELPLRLAEFGTVYRYEKAGE 384


>gi|265751997|ref|ZP_06087790.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|263236789|gb|EEZ22259.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 646

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 47/438 (10%), Positives = 109/438 (24%), Gaps = 40/438 (9%)

Query: 62  DEDRPNKGV--FSLQDDDGQWISLR---YDLTAPLARY--VAENFDTIVFPCRTYRIGPV 114
           D  +  K +  F   D  G+   L       TA   R                       
Sbjct: 242 DHRKIGKEMDLFMFTDMVGK--GLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
            +N     G + ++ +     + +  E  +  +  M       +       +  +  R  
Sbjct: 300 NKNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIA 359

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
             G + +    G+     R+      D         VK         +  +    +    
Sbjct: 360 EFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVM--DIINIVFKSMNFE 417

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +     ++ EK +       K   A  +   E        +     +        
Sbjct: 418 NVEAQISLRDKVNREKYIGSDENWEKAEQAIIEACEE---KGLTAKVEYGEAAFYGPKLD 474

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            +             I     + E+ +    GS            + +   +    F   
Sbjct: 475 FMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDN---------QKHRPVMIHRAPFGSM 525

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              + V ++              V I  +          +     LR   +RA +    +
Sbjct: 526 ERFVAVLIEHTAGKFPLWLTPDQVAILPIS--EKFNEYAEKVKAELRKYDVRAIVD-DRN 582

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +  G +++  + +  P  +I G  E   G + ++   +G + + +I+             
Sbjct: 583 EKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEEFGK--------- 633

Query: 475 TIPISELVSTVKKILQEN 492
                 L   V  ++ + 
Sbjct: 634 -----NLAEEVSNMINKW 646


>gi|238620001|ref|YP_002914827.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|259511621|sp|C4KHU5|SYP_SULIK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238381071|gb|ACR42159.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 481

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 77/256 (30%), Gaps = 28/256 (10%)

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           +  E + + +     ++   E + I + +  +      +       R         ++ I
Sbjct: 159 TFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLTIPYVLSERPEWDRFAGALHTYAFDTI 218

Query: 311 LGFPVMNEKQKPVVFGSVGGGG---RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +    + +       G         +           +  + G S      ++A+   + 
Sbjct: 219 MPDGKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISDRAIASVIAIHGDDH 278

Query: 368 STNNIKEMGPVLITTMDHDSDS-------LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  + P+ +  +   + +       +       +ML    I       + K  G +
Sbjct: 279 GPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIEICEMLNKNNITCVTDQDTEKTPGEK 338

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               + +  P+ +  G  E +   + IK                  R   +   T+   E
Sbjct: 339 FYIWEIKGVPIRLEIGPRELASSTVFIK------------------RRDNLKSYTVKKEE 380

Query: 481 LVSTVKKILQENKEEI 496
           +V+ VK++L E +E++
Sbjct: 381 VVNKVKEVLNEIQEDL 396



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 13/191 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         ++R  I+  IRN+ ++ G + +  PLL   D L +         + V
Sbjct: 32  PVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEV 91

Query: 71  FSLQDDDGQW-----ISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
           F      G       ++LR   T+ +A    EN     +     + Y+I  VFR E    
Sbjct: 92  F-WVTKGGSEDLDVKLALRP--TSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT 148

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI--NNRKILDGILE 180
               +  +        +      +    + + +E      N+  I    + R   D    
Sbjct: 149 RPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLTIPYVLSERPEWDRFAG 208

Query: 181 KIGLHGDDKLN 191
            +  +  D + 
Sbjct: 209 ALHTYAFDTIM 219


>gi|146319020|ref|YP_001198732.1| threonyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321228|ref|YP_001200939.1| threonyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752085|ref|YP_003025226.1| threonyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753910|ref|YP_003027051.1| threonyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|166225507|sp|A4W2F0|SYT_STRS2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225509|sp|A4VW43|SYT_STRSY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145689826|gb|ABP90332.1| Threonyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692034|gb|ABP92539.1| Threonyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251816374|emb|CAZ52005.1| threonyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251820156|emb|CAR46495.1| threonyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292558668|gb|ADE31669.1| Threonyl-tRNA synthetase [Streptococcus suis GZ1]
 gi|319758452|gb|ADV70394.1| threonyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 650

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/380 (9%), Positives = 106/380 (27%), Gaps = 16/380 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +      +    D+       +  +  +  M       V 
Sbjct: 284 KELASGYQHVYTPPLASVELYKTSGHWEHYSEDMFPTMDMGDGEEFVLRPMNCPHHIQVY 343

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++    +  
Sbjct: 344 KNHVRSYRELPVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKAL 403

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   + ++  ++  E+ +      KG  +  +  +  
Sbjct: 404 QLIIDVY---ADFNLNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMD-EMGVDYF 459

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F        P  FG    G        
Sbjct: 460 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFL------LPERFGLTYIGAD----GE 509

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +     S       + +++ + +         V +  +  ++  L       + 
Sbjct: 510 EHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPTQVTMIPISVEA-HLDYAWKVAKE 568

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L+  G+R  +    ++    +++ +     P  +I G  E     + ++        ++ 
Sbjct: 569 LQDRGVRVHVD-ERNEKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQS 627

Query: 460 IKNNESWREARVAQITIPIS 479
           +        A +A+ + P  
Sbjct: 628 VSEFVDHILADIARKSRPAE 647



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/186 (10%), Positives = 47/186 (25%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     +  ++ +F  
Sbjct: 262 GLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWEHYSEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA---PL----ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            D   G+   LR         +     R   E    I      +R             R 
Sbjct: 321 MDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPVRIAELGMMHRYEKSGALTGLQRVRE 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +    +   ++ D      +    + +   + +  +   +   + 
Sbjct: 381 MTLNDGHIFVTPEQIQEEFKKALQLIIDVYADFNLNDYRFRLSYRDPEDKEKYYDNDEMW 440

Query: 186 GDDKLN 191
            + +  
Sbjct: 441 ENAQRM 446


>gi|27468170|ref|NP_764807.1| glycyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867007|ref|YP_188708.1| glycyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|293366474|ref|ZP_06613151.1| glycine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258360|sp|Q8CSD5|SYG_STAES RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|71153561|sp|Q5HNY2|SYG_STAEQ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|27315716|gb|AAO04851.1|AE016748_85 glycyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637665|gb|AAW54453.1| glycyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|291319243|gb|EFE59612.1| glycine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329735209|gb|EGG71501.1| glycine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737405|gb|EGG73659.1| glycine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 463

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/219 (9%), Positives = 51/219 (23%), Gaps = 4/219 (1%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E    +  +    +  +                   K            +   Y+     
Sbjct: 248 EWLTDLNISEDNMRLRDHDEDELSHYSN-ATTDIEYKFPFGWGELWGIASRTDYDLRQHS 306

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               E  K     +      Y    S    +   A          +   K   +  +   
Sbjct: 307 EHSGEDFKYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYAEEGVEGSKDARTVMHFHP 366

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P     +       S+     + L +      +    S++ G + +  D    P  I
Sbjct: 367 ALAPYKAAVLPLSKKLSSEAIKIFEQLSS---SFAIDFDESQSIGKRYRRQDEIGTPYCI 423

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + ++D    +++   I   E++   +V 
Sbjct: 424 TFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAEKVK 462


>gi|325479231|gb|EGC82327.1| proline--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 572

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++ N+I   +R   EN+    + T +L+  +   +     +     +F 
Sbjct: 37  SGVYSFLPLGKKVINKIEAIVRESMENHDSIEVSTSILQAKEI-WETSGRWETFGPEMFK 95

Query: 73  LQDDDGQWISLRY 85
           L+D   +   L  
Sbjct: 96  LEDRHNRQYCLGP 108


>gi|253743717|gb|EET00043.1| Glycyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 621

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 1/84 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  + D +S      + LR +GI A+    S    G +   AD    P A+      
Sbjct: 509 VLPLQRNDDLMSTSSSILERLRCSGIAAKQD-ASGAIIGKRYARADEIGIPFAVTIDFQT 567

Query: 440 RSRGMLQIKDLAKGKELSREIKNN 463
              G + I++     ++  + K  
Sbjct: 568 LEDGSVTIRERDSMSQIRVDSKQI 591


>gi|253755215|ref|YP_003028355.1| threonyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251817679|emb|CAZ55427.1| threonyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 650

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/380 (9%), Positives = 106/380 (27%), Gaps = 16/380 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +    +     P+   E +      +    D+       +  +  +  M       V 
Sbjct: 284 KELASGYQHVYTPPLASVELYKTSGHWEHYSEDMFPTMDMGDGEEFVLRPMNCPHHIQVY 343

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
                 +  +  R    G++ +    G     +R+  +   D       + ++    +  
Sbjct: 344 KNHVRSYRELPVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTPEQIQEEFKKAL 403

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
                 +   A+         +S+   + ++  ++  E+ +      KG  +  +  +  
Sbjct: 404 QLIIDVY---ADFNLNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGAMD-EMGVDYF 459

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
              G  +         V+        +    L F        P  FG    G        
Sbjct: 460 EAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFL------LPERFGLTYIGAD----GE 509

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +     S       + +++ + +         V +  +  ++  L       + 
Sbjct: 510 EHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPTQVTMIPISVEA-HLDYAWKVAKE 568

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L+  G+R  +    ++    +++ +     P  +I G  E     + ++        ++ 
Sbjct: 569 LQDRGVRVHVD-ERNEKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQTQS 627

Query: 460 IKNNESWREARVAQITIPIS 479
           +        A +A+ + P  
Sbjct: 628 VSEFVDHILADIARKSRPAE 647



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/186 (10%), Positives = 47/186 (25%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+  + TP L   +   K     +  ++ +F  
Sbjct: 262 GLPFWLPNGATIRRTLERYITDKELASGYQHVYTPPLASVELY-KTSGHWEHYSEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA---PL----ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            D   G+   LR         +     R   E    I      +R             R 
Sbjct: 321 MDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPVRIAELGMMHRYEKSGALTGLQRVRE 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +    +   ++ D      +    + +   + +  +   +   + 
Sbjct: 381 MTLNDGHIFVTPEQIQEEFKKALQLIIDVYADFNLNDYRFRLSYRDPEDKEKYYDNDEMW 440

Query: 186 GDDKLN 191
            + +  
Sbjct: 441 ENAQRM 446


>gi|163816527|ref|ZP_02207891.1| hypothetical protein COPEUT_02717 [Coprococcus eutactus ATCC 27759]
 gi|158448227|gb|EDP25222.1| hypothetical protein COPEUT_02717 [Coprococcus eutactus ATCC 27759]
          Length = 471

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/231 (6%), Positives = 59/231 (25%), Gaps = 11/231 (4%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +            +      ++ +   +   +     ++       +    +        
Sbjct: 243 EWFEYWRSFCINWLKDLGIKDDEMRARDHSHEELCFYSKGTTDIEYLFPFGWGELWGIAD 302

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +               +  +      ++ A   ++         +++ +  
Sbjct: 303 RTDYDLTQHQNTSGESMEYFDDETKEKYIPYVIEPSLGADRVTLAFLCAAYDEENIGTEE 362

Query: 370 --------NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                   +   ++ PV I  +          +     L +     E       N G + 
Sbjct: 363 KPDIRTVLHFHPQLAPVKIGVLPLSKKLNEGAEKIYAEL-SKYYNCEFD--DRGNIGKRY 419

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  D    P  +         G + ++D    ++   +I++ +++ E +  
Sbjct: 420 RRQDEIGTPFCVTYDFDSVEDGAVTVRDRDTMEQERVKIEDLKAYFEKKFE 470


>gi|86160363|ref|YP_467148.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|114152165|sp|Q2IGK6|SYP1_ANADE RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|85776874|gb|ABC83711.1| prolyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 575

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 33/116 (28%), Gaps = 11/116 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D      R   +I   +R      G      P L  ++   K     +     +F L
Sbjct: 41  GIYDYLPLAKRSLTKIEAIVREEMNAIGGQEFFLPALHPAEI-WKESGRWEVMGDNMFRL 99

Query: 74  QDDDGQWISLRYDLT-----APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           +D  G    L   +T       +AR   +   +     + +        ++  P  
Sbjct: 100 KDRKGGDYGLG--MTHEEIFTAIAR---DELRSYRQLPQVWYQIQTKFRDEPRPKS 150



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 1/88 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
              + T+  + +     +     L   G+         +  G + K AD    P+ +  G
Sbjct: 477 HATVLTLGPEPELRKAAEEVVAALGKEGVEVLFDDRDERA-GVKFKDADLLGIPIRVAVG 535

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNE 464
               + G ++ K    G      +    
Sbjct: 536 KKGLAAGNVEWKLRRGGAVELVPLGEVA 563


>gi|17232545|ref|NP_489093.1| prolyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|81852728|sp|Q8YM83|SYP_ANASP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|17134191|dbj|BAB76752.1| prolyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 604

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ S+ L K     D   K    
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQLQPSE-LWKESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +FSL D   Q + L     ++   +AR +  ++  +       +  
Sbjct: 96  MFSLIDRREQQLGLGPTHEEVITAIARDMIRSYRQLPLHLYQLQTK 141



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 20/129 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++     +D+  +   +     L  +G+   +   + +  G + K AD 
Sbjct: 494 IWPVAIAPYHAIVTIPNINDAQQVEIAEKLYTELNQSGVETLLDDRNERA-GVKFKDADL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I+ G    + G ++I                     A      IPI E+++T++
Sbjct: 553 IGIPYRIVTG-RAITNGKVEI------------------VERATRQSQEIPIDEVITTLQ 593

Query: 487 KILQENKEE 495
           + ++   E+
Sbjct: 594 QWIRAAIEQ 602


>gi|300361194|ref|ZP_07057371.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353813|gb|EFJ69684.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 643

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 46/137 (33%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++    + 
Sbjct: 499 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNEEAHGAY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + L   G RAE+    ++  G +++ +  +  P  ++ G  E +   + ++    
Sbjct: 559 ADKVREELAKRGFRAEVDH-RNEKLGYKIRESQTQKVPYTLVLGDDEMNANGVNVRRYGT 617

Query: 453 GKELSREIKNNESWREA 469
            +++S+ + +  +  +A
Sbjct: 618 EEQISKSLDDFIAEIDA 634



 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 55/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  + + +  G++ + TP+L   D+  K           +F
Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVAD--GYEHVYTPVLMNVDAY-KTSGHWAHYRDDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 375

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                    A++  ++ D  +   I    + +   + K  D       
Sbjct: 376 REMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDYYFRLSYRDPKNTDKYYANDE 435

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 436 MWEKSQSM 443


>gi|227514102|ref|ZP_03944151.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087473|gb|EEI22785.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 634

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 59/199 (29%), Gaps = 5/199 (2%)

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
             +E+   S+ + K+  +S  +           Y      +        +E    +    
Sbjct: 423 ANDEMWERSQSMLKAAMDSMGLDYYEAEGEAAFYGPKLDIQTKT-ALGNDETMSTIQLDF 481

Query: 328 VGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
           +         V     Q+ P     G    + R +  L  +             +     
Sbjct: 482 MLPEKFDLHYVGEDGKQHRPVMIHRGVVGTMERFVAYLTEIYKGAFPTWLAPNQVNIIPV 541

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D           +  R A +R  +   S K  G +++ +  +  P  ++ G  E + G 
Sbjct: 542 SDEKHGDYADDLAREFRAAQLRTVVDHRSEK-MGYKIRESQTQKVPYTLVVGEDEVANGT 600

Query: 445 LQIKDLAKGKELSREIKNN 463
           + ++   +  ++S   ++ 
Sbjct: 601 VSVRKYGEKDQVSMSKQDF 619



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 56/186 (30%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   + +     G++ + TP+L   D+  K     D   + +F  
Sbjct: 250 GLPYWMPKGSTIRRTIERYVIDKEVGDGYEHVYTPVLMNLDAY-KTSGHWDHYREDMFPP 308

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 309 MDMGDGELLELRPMNCPSHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 368

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A++  ++ D  +   I    + +   + K  +       + 
Sbjct: 369 MTLNDGHTFVALDQIQDEFAKILKLIMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMW 428

Query: 186 GDDKLN 191
              +  
Sbjct: 429 ERSQSM 434


>gi|254491441|ref|ZP_05104620.1| threonyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462919|gb|EEF79189.1| threonyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 641

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 47/368 (12%), Positives = 104/368 (28%), Gaps = 5/368 (1%)

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           ++I  V  N      R   + +     V        +       D + +   +  DY + 
Sbjct: 270 WQIYRVVENYIRDVLRDNDYQEVRTPQVVDRTLWEKSGHWDKFGDMIFSTHSENRDYAVK 329

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             N      I  +      D                   L G+ + L     D++  F  
Sbjct: 330 PMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGTLHGL-MRLRGFTQDDAHIFCT 388

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
              + SE    +     +  +   +E+   +        G +E+   +E   +   N+  
Sbjct: 389 EDQIQSEVATFIELLHEVYADFGFNEIIVKLSTRPENRVGSDEVWDKAEKALEDALNAAD 448

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           +        G  Y     +        + +    +       G      V+    + VP 
Sbjct: 449 LDWELQPGEGAFYGPKIEFSLKDCLSRVWQCG-TIQVDFSMPGRLDAHFVADDNSKQVPV 507

Query: 349 T--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                 +G     + +   E +      + P  +  M          Q   + L+  G R
Sbjct: 508 MLHRAILGSLERFIGILIEEYAGAFPTWLAPKQVMVMGISDKQSEYVQKVAKDLQKQGFR 567

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            +  L  ++  G +++    R  P  I+ G  E     + ++        + ++++    
Sbjct: 568 VDTDL-RNEKIGFKIREHTLRRVPYLIVVGEREAQDNAVAVRTRKGEDLGAMQLEDFVGL 626

Query: 467 REARVAQI 474
            E  VA+ 
Sbjct: 627 LEKDVARR 634



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/160 (8%), Positives = 45/160 (28%), Gaps = 2/160 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +I   + + IR++  +  +  + TP +    +L +     D+    +FS 
Sbjct: 261 GMIFWHDNGWQIYRVVENYIRDVLRDNDYQEVRTPQVVDR-TLWEKSGHWDKFGDMIFST 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             ++ +  +++        +   +   +                 +              
Sbjct: 320 HSEN-RDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGTLHGLMRLRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
               +     + ++   +A  +E +     D+       K
Sbjct: 379 TQDDAHIFCTEDQIQSEVATFIELLHEVYADFGFNEIIVK 418


>gi|184156306|ref|YP_001844646.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|183227650|dbj|BAG28166.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 634

 Score = 53.7 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 59/199 (29%), Gaps = 5/199 (2%)

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
             +E+   S+ + K+  +S  +           Y      +        +E    +    
Sbjct: 423 ANDEMWERSQSMLKAAMDSMGLDYYEAEGEAAFYGPKLDIQTKT-ALGNDETMSTIQLDF 481

Query: 328 VGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
           +         V     Q+ P     G    + R +  L  +             +     
Sbjct: 482 MLPEKFDLHYVGEDGKQHRPVMIHRGVVGTMERFVAYLTEIYKGAFPTWLAPNQVNIIPV 541

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D           +  R A +R  +   S K  G +++ +  +  P  ++ G  E + G 
Sbjct: 542 SDEKHGDYADDLAREFRAAQLRTVVDHRSEK-MGYKIRESQTQKVPYTLVVGEDEVANGT 600

Query: 445 LQIKDLAKGKELSREIKNN 463
           + ++   +  ++S   ++ 
Sbjct: 601 VSVRKYGEKDQVSMSKQDF 619



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 56/186 (30%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   + +     G++ + TP+L   D+  K     D   + +F  
Sbjct: 250 GLPYWMPKGSTIRRTIERYVIDKEVGDGYEHVYTPVLMNLDAY-KTSGHWDHYREDMFPP 308

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 309 MDMGDGELLELRPMNCPSHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 368

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A++  ++ D  +   I    + +   + K  +       + 
Sbjct: 369 MTLNDGHTFVALDQIQDEFAKILKLIMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMW 428

Query: 186 GDDKLN 191
              +  
Sbjct: 429 ERSQSM 434


>gi|229013002|ref|ZP_04170167.1| Prolyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228748256|gb|EEL98116.1| Prolyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 566

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/250 (10%), Positives = 76/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ S+ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQASE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYSGLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I  EK +  +
Sbjct: 272 IAAEKCIKSM 281



 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +        L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKSVAPFHVHVIPVNMKSDAQREMGGNIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|298491630|ref|YP_003721807.1| threonyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298233548|gb|ADI64684.1| threonyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 606

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  +      +   +     +   GIRAE+ L   +  G  ++ A++   P+  
Sbjct: 504 WLAPVQIRLLPVGEAQIDFTKEVVAKMLALGIRAEVDLSGER-LGKLIRNAEKDKIPVMA 562

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E     L I+  A G+
Sbjct: 563 VVGVKEVETNSLSIRTRASGE 583


>gi|210134324|ref|YP_002300763.1| threonyl-tRNA synthetase [Helicobacter pylori P12]
 gi|238065114|sp|B6JPM2|SYT_HELP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|210132292|gb|ACJ07283.1| threonyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 612

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 85/263 (32%), Gaps = 9/263 (3%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F     + SE +  ++ F    ++         +    A   G +E+   +
Sbjct: 354 EFTQDDAHIFCSFEQIQSE-VSAILDFTHKIMQAFDFSYEMELSTRPAKSIGDDEVWEKA 412

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG--GGRY 334
               K     +RI        G  Y      +       +  K +               
Sbjct: 413 TSALKEALKEHRIDYKIDEGGGAFYGPKIDIKIT---DALKRKWQCGTIQVDMNLPERFK 469

Query: 335 DGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
               +       P       +G     +A+ S     N    + P  I  +  + +    
Sbjct: 470 LAFTNERNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVF 529

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                ++L+   I  E+   +  +   +++ A+++  P+ ++ G  E    +L I+D  K
Sbjct: 530 ALKLKEVLKKRDIFVEVLDKND-SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREK 588

Query: 453 GKELSREIKNNESWREARVAQIT 475
             +    +K   +  E+++ +++
Sbjct: 589 QAQYKMPLKEFLNMVESKMQEVS 611



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSQALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDEVWEKATSALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E+   E
Sbjct: 463 NLPERFKLAFTNERNHAE 480


>gi|194017082|ref|ZP_03055694.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010950|gb|EDW20520.1| threonyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 646

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/347 (11%), Positives = 104/347 (29%), Gaps = 20/347 (5%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M   D +       +   I  N       +  +I   G     
Sbjct: 312 TSGHWAHYQEDMFPVMEMDNEDLVLRPMNCPHHMMIYKNEPHSYRELPIRIAELGTMHRY 371

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L  + ++    L    + +   +  +    T            ++  +  D   +
Sbjct: 372 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTV----------RLIEEVYQDFGLN 421

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +      +     EK F++  + ++         + +        G   + G   +  +
Sbjct: 422 DYTFRLSYRDPEDTEKYFDDDAMWNKAQSMLKDAMDELGHDYYEAEGEAAFYGPKLDVQV 481

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-----SIGISRLIVALKSLE 366
              +  E+    V        R+D       G++           S     +   ++  +
Sbjct: 482 KTALGKEETLSTVQVDFLLPERFDLTYIGEDGKHHRPVVIHRGVVSTMERFVAFLIEEYK 541

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +           +  +   S  L   +   + L+  G+R E+     +  G +++ A  
Sbjct: 542 GALPTWLAPVQFQVIPVSP-SVHLDYAKKVQERLQLEGLRVELD-SRDEKIGYKIREAQM 599

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +  P  ++ G  E   G + ++    G++ S  + + E++ +  VA+
Sbjct: 600 QKIPYMLVVGDQEAENGAVNVR--KYGEQDSETM-DLEAFVKHAVAE 643



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 70/258 (27%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G++ + TP+L   +   K         + +F +
Sbjct: 268 GLPLWLPKGATIRRVIERYIVDKEVRLGYEHVYTPVLANVELY-KTSGHWAHYQEDMFPV 326

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 327 MEMDNEDLVLRPMNCP-------HHMMIYKNEPHSYRELPIRIAELGTMHRYEMSGALS- 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                   T +     +  D ++   I+       +     L+    ++     +   + 
Sbjct: 379 GLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIEEVYQDFGLNDYTFRLSYRDPEDTEKY 438

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +K        +  L  +           G  L  +    +    ++   +   
Sbjct: 439 FDDDAMWNKAQSMLKDAMDELGHDYYEAEGEAAFYGPKLDVQVKTALGKEETLSTVQVDF 498

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E    T  GE G + 
Sbjct: 499 LLPERFDLTYIGEDGKHH 516


>gi|158320290|ref|YP_001512797.1| glycyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|254781873|sp|A8MG73|SYG_ALKOO RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|158140489|gb|ABW18801.1| glycyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 462

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/240 (7%), Positives = 57/240 (23%), Gaps = 16/240 (6%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +  +   E  K  +       E + I +   +   + ++          
Sbjct: 226 LEFFCKPGEDLEWFNYWKEFCKNWLLNLNLTEENLRIRDHAEEELSHYSKATTDFEYRFP 285

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           F +    +             Y   ++  K                
Sbjct: 286 FGWGELWGVADRTDFDLKQHSEHSGE------DFTYQDPITNEKYVPYCIEPSVGVDRVA 339

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI--------RAEMF 410
           +  L          ++   V++      +   +     T+ L+   +           + 
Sbjct: 340 LAFLVDAYDEEVIDEKDTRVVLRLHPALAPFKAAVLPLTKKLKDQALELYETLSENYMVD 399

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              + + G + +  D    P  I           + I+     ++   +I    ++   +
Sbjct: 400 YDEAGSIGKRYRRHDEIGTPFCITFDYDSLEDQCVTIRHRDSMEQERIQISELTTYLNEK 459


>gi|82751271|ref|YP_417012.1| threonyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123768508|sp|Q2YTA7|SYT_STAAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|82656802|emb|CAI81231.1| threonyl-tRNA synthetase 1 [Staphylococcus aureus RF122]
          Length = 645

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  + +         V I  ++ D       +     L++ G+R  +    ++  G +++
Sbjct: 533 EETKGAFPTWLAPKQVQIIPVNVD-LHYDYARQLQDELKSQGVRVSID-DRNEKMGYKIR 590

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A  +  P  I+ G  E     + ++      + + E K+   W              LV
Sbjct: 591 EAQMQKTPYQIVVGDKEVENNQVNVRQYGSQDQETVE-KDEFIW-------------NLV 636

Query: 483 STVKKILQENK 493
             ++  L++++
Sbjct: 637 DEIR--LKKHR 645



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  I   I +   + G+D + TP+L   D   K     D   + +F  
Sbjct: 262 GLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLY-KTSGHWDHYQEDMFPP 320

Query: 74  QDDDG-QWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
              D  + + LR           A    +    P R   +G + R E           R 
Sbjct: 321 MQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRG 380

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                  +       +     +  M+ D  +  G +   + +   + +  +   +   + 
Sbjct: 381 MTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMW 440

Query: 186 GDDKLN 191
              +  
Sbjct: 441 NKAENM 446


>gi|114567792|ref|YP_754946.1| histidyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338727|gb|ABI69575.1| histidyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 62

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%)

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           S +     L YA+R      +I G  E + G +++K +  G+E     +  
Sbjct: 6   SGRRIKKALDYANREGLQQVLILGGNELASGKIRLKFMQDGREEDVAFEQL 56


>gi|291460611|ref|ZP_06600001.1| proline--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291416802|gb|EFE90521.1| proline--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 478

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 4/129 (3%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +++         L K     + L  AG R ++   S ++ G +    + 
Sbjct: 283 KIPPRIAPTQIMIVPVQQQKEGVLDKAFSLRERLIKAGFRVKVD-DSDRSPGYKFADCEM 341

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           R  PL +  G  +   G   +     G++L+  +   E      + +I    S+++   +
Sbjct: 342 RGIPLRLEIGPRDIEAGQAVLVRRDTGEKLTAPLDGLEKECGELLERI---QSDMLERAR 398

Query: 487 KILQENKEE 495
           K ++E   +
Sbjct: 399 KFMKERTTD 407


>gi|257389171|ref|YP_003178944.1| prolyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257171478|gb|ACV49237.1| prolyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 484

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 68/252 (26%), Gaps = 19/252 (7%)

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
               A E+    L    +L                  +    +T    E ++      + 
Sbjct: 171 DEDDAWEETMTRLDQYEKLYEDVLAMPPLKGRKPEHDKFPGAHTTTTVETLMPDGKSVQA 230

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVAL----KSLESSTNNIKE 374
                 G+          V   + +     T + +    +   +                
Sbjct: 231 ATSHYLGTSFAEAFDITYVDEDEEEETAHTTSWGLSWRAMGALIMTHSDDQGLVLPPTLA 290

Query: 375 MGPVLITTM---DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNC 429
              V++  +   D   + L         L  AG+R        +N G   KY D   +  
Sbjct: 291 PKQVVVVPIWQEDTKDEVLEYAADVAAELDEAGVRVHFDDRDHRNPG--FKYNDWELKGV 348

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI-----SELVST 484
           PL +  G  E     L +     G+ ++      E+     + ++   +       L   
Sbjct: 349 PLRVEIGPNEVEDEELTLSHRPDGESITESRDGLETTVRDHLDEVFAKLYASAEETLEGE 408

Query: 485 VKKILQENKEEI 496
           +++    ++EEI
Sbjct: 409 IRE--ATSREEI 418


>gi|187777500|ref|ZP_02993973.1| hypothetical protein CLOSPO_01075 [Clostridium sporogenes ATCC
           15579]
 gi|187774428|gb|EDU38230.1| hypothetical protein CLOSPO_01075 [Clostridium sporogenes ATCC
           15579]
          Length = 463

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/228 (8%), Positives = 56/228 (24%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +   +     +       E +   +  ++   + +        +    +        
Sbjct: 238 EWFNYWKDYCWNFLINLGINKESIRFRDHSQEELSHYSNATSDIEFLFPFGWGELWGVAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F +    +      +       +  V      ++ A    +         + LE   
Sbjct: 298 RTDFDLKKHMEHSGEDLNYLDPTTKERYVPYCIEPSLGADRVVLAFLVDAYDEEELEGGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        + Q    ML +      +    + + G + +  
Sbjct: 358 VRNVLHLHPALAPFKAAVLPLSKKLSDESQEVYSML-SKKFN--IDYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  I           + I+D     ++   I   E + E ++ 
Sbjct: 415 DEIGTPYCITVDFDTLEDNTVTIRDRDTMDQIRVNINELEKFIEDKLQ 462


>gi|168000563|ref|XP_001752985.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695684|gb|EDQ82026.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 544

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 17/130 (13%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              +  +  V+I       D   +    T+ L+ AG R +  L  + + G +  + + + 
Sbjct: 342 PPRVAPIQVVVIPVPFKGIDPSEECLKVTRQLQEAGFRVKDDLRDNYSPGWKYSHWELKG 401

Query: 429 CPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
            PL I  G  +     +++  +DL    E                    IP++ LV  + 
Sbjct: 402 VPLRIEIGPRDIENKQVRVVRRDLEDKTE---------------GRSQDIPMANLVEKIG 446

Query: 487 KILQENKEEI 496
           +IL+  ++ +
Sbjct: 447 EILETMQKAL 456


>gi|296089916|emb|CBI39735.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/138 (9%), Positives = 41/138 (29%), Gaps = 3/138 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +    R +   +             + L+  +            ++  +     S     
Sbjct: 549 EDEAKRERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS--EKSQPYAL 606

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                +  AG   ++   + +    +++ A        ++ G  E +   + ++   KG 
Sbjct: 607 QVRDQIHQAGYYVDVD-TTDRKIQKKVREAQLAQYNFILVVGEEEANTRQVSVRVRDKGD 665

Query: 455 ELSREIKNNESWREARVA 472
                ++N  S+ ++  A
Sbjct: 666 HSVMSMENLLSYFKSETA 683



 Score = 37.1 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N++++ I+  Y   G+  + +P + Y+  L +         + +F  + + 
Sbjct: 316 FLPHGGRIYNKLMEFIKAQYRERGYHEVFSPTM-YNMQLWETSGHAANYKENMFVFEVEK 374

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 375 -QEFGLKPMNCPG 386


>gi|82617275|emb|CAI64180.1| glycyl-tRNA synthetase [uncultured archaeon]
          Length = 594

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 37/114 (32%), Gaps = 20/114 (17%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V +  +    + ++        LR  G    +    S   G + +  D    P ++   
Sbjct: 489 QVAVLPLLTREELIAPALAIVGTLRENG--VFVSYDDSGTIGRRYRRNDEIGTPFSVTID 546

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                   + I+D                     +AQI +PI EL  T++ +++
Sbjct: 547 YETLDDDTVTIRDRDS------------------MAQIRMPIGELAETLRAMIR 582



 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++ RI D  R +Y    GF  IETP +  +       
Sbjct: 38 GFYDYGPLGAMLKRRIEDIWRKMYVIEEGFYEIETPTIGIAAIFDASG 85


>gi|313904501|ref|ZP_07837877.1| threonyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470643|gb|EFR65969.1| threonyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 591

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 69/233 (29%), Gaps = 5/233 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV---KGTIAGEKGFNELVV 274
            R D++        +  E  DIM     I     +    EL       +     +++   
Sbjct: 324 FRQDDAHILVTEDQIADEIKDIMSIATQIYGTFGLSYGAELSTRPDDFMGDIAVWDKAEA 383

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
             + +    Y     +++               +  LG        +      +    +Y
Sbjct: 384 SLKEILNDVYGEGNYEVNEGDGAFYGPKIDLKMKDALGREWQMGTIQLDFQLPLNFDMKY 443

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                  K   +        + R I  L     ++     + P  +  +   ++     +
Sbjct: 444 AAQDGTVKQPVMIHRAIFGSLERFIGILIENYKASFPFW-LSPYQVGVVPIRTEHNEYAK 502

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                L+ AGIR E+   + KN   ++K     + P  I+ G  E S G + I
Sbjct: 503 KVVDALKAAGIRVEVDY-ADKNMNEKIKAFKTYHDPYIIVVGDKEASEGTVSI 554



 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E   G      +  ++ N +L   R I+E +G+  I  P+L  S  L +        
Sbjct: 196 MFDETAPGMPYWLPRGWKLFNSLLSFWRGIHEEHGYQEISGPILSNSK-LWQTSGHWGHY 254

Query: 67  NKGVF 71
              +F
Sbjct: 255 KDNMF 259


>gi|297155818|gb|ADI05530.1| threonyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 659

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +   + +    +  G+R E+   S +    +++ A R   P  I
Sbjct: 557 WLAPVQAVGIPIGDSHVPYLEEFAAEAKAKGLRVEVDSSSDR-MQKKIRNAQRAKIPFMI 615

Query: 434 IQGTGERSRGMLQIKDLAKGKEL 456
           I G  + + G +  +    G + 
Sbjct: 616 IAGDDDMAAGAVSFRY-RDGSQK 637


>gi|296331396|ref|ZP_06873868.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305676383|ref|YP_003868055.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151511|gb|EFG92388.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414627|gb|ADM39746.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 638

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 38/135 (28%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IRN +    R +    G++ + TP    +  L +     D     ++  
Sbjct: 264 GMPFYLPKGQIIRNELERFSRELQTKAGYEEVRTP-FMMNQRLWEQSGHWDHYRDNMY-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +++             +         +YR  P+   E     R       + 
Sbjct: 322 SEVDDTRFAMKPMNCPG-------HMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNG 374

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 375 MLRVRTFCQDDAHIF 389



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/317 (9%), Positives = 79/317 (24%), Gaps = 8/317 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            + +      +       D +    +    + +   N      I +       D      
Sbjct: 299 FMMNQRLWEQSGHWDHYRDNMYFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYRDLPIRMA 358

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
              +         L G+  +      D++  F +   + SE  + +     +        
Sbjct: 359 EFGQVHRHEYSGALNGMLRVRT-FCQDDAHIFVREDQIESEIKEAIRLIDEVYRTFGFEY 417

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             EL         G + L   SE           +        G  Y     +       
Sbjct: 418 SVELSTRPEDSL-GDDSLWEASERALAYVLEELNLSYEVNKGDGAFYGPKIDFHIKDALK 476

Query: 315 VMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             ++                   +    + +   +    F        + ++    +   
Sbjct: 477 RSHQCATIQLDFQMPEKFDLTYINEHNEKVRPVVIHRAVFGSIDRFFGILIEHFGGAFPV 536

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  + H        +     L+  GIRA +    ++  G +++ +  +  P 
Sbjct: 537 WLAPIQVQIIPVSH--VHWDYCRKVQAELKRLGIRARID-ERNEKLGYKIRESQVQKIPY 593

Query: 432 AIIQGTGERSRGMLQIK 448
            ++ G  E  +  + ++
Sbjct: 594 VLVLGDHEEQKDAVNVR 610


>gi|118617676|ref|YP_906008.1| prolyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|152112934|sp|A0PQB8|SYP_MYCUA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118569786|gb|ABL04537.1| prolyl-tRNA synthetase ProS [Mycobacterium ulcerans Agy99]
          Length = 582

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQL 421
            +L            V +   + D+++ +        L   G+  E+ L   + + G + 
Sbjct: 473 DNLGLRWPAEIAPFGVHLVIANKDAEARAGAIGLAGEL--DGLGVEVLLDDRQASPGVKF 530

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           K A+    P  ++ G    + G+++++D   G+     + +
Sbjct: 531 KDAELLGMPWVVVVG-RGWADGVVELRDRFGGQTRELTVGD 570



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 24/75 (32%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R+   I   IR      G   I  P L      ++  ++    D    GV
Sbjct: 40  GLYSWLPLGLRVLRNIERVIREEMNAIGGQEILFPALLPRAPYETTNRWTEYGD----GV 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 96  FRLEDRRGNDYLLGP 110


>gi|220934623|ref|YP_002513522.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|259516780|sp|B8GRI1|SYT_THISH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219995933|gb|ACL72535.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 643

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RIR  I     +++E  G+  + TP +   D L K     D  ++ ++  
Sbjct: 262 GLVFWHPKGARIRRAIEQFWFDMHERAGYQFLYTPHIANLD-LWKTSGHADFYSESMYEP 320

Query: 74  QDDDGQWISLRYDLTA 89
            +DD Q   L+     
Sbjct: 321 MEDDNQAFQLKPMNCP 336



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     LR  GIRA+  L  ++  G +++    +  P  +
Sbjct: 537 WLAPVQVQVLTITDRQDDYAREVADRLRNRGIRADADL-RNEKIGFKIREHTLQRVPYLL 595

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E     + ++    G+
Sbjct: 596 VLGDREMETNTVAVRT-RSGE 615


>gi|114332291|ref|YP_748513.1| threonyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313048|sp|Q0ADN4|SYT_NITEC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114309305|gb|ABI60548.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Nitrosomonas
           eutropha C91]
          Length = 635

 Score = 53.7 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 8/121 (6%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDR 65
           ++ E P G      K   I  +I   +R +    G+  I TP +   D  L +     + 
Sbjct: 255 MQEEAP-GMVYWHPKGWAIWQQIEQYMRQVLAKNGYVEIRTPQV--LDISLWEKSGHWEN 311

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPG 123
             + +F  + +  +  +++        +    +        P R    G   RNE  G  
Sbjct: 312 FRENMFITESES-RHYAIKPMNCPGHVQVF-NHGLRSYRDLPLRLAEFGSCHRNEASGAL 369

Query: 124 R 124
            
Sbjct: 370 H 370



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/257 (10%), Positives = 70/257 (27%), Gaps = 6/257 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E    +     + ++   HE    +    A   G  E    +E   
Sbjct: 381 DDAHIFCTEDQVLEEVTKFIDLLNQVYIDFGFHENLIKLSTRPAQRVGTEEQWDRAEAAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            +  N   +        G  Y     +          +           +  G G     
Sbjct: 441 AAALNQKELNWELQPGEGAFYGPKIEFTLKDSLGRKWQCGTLQLDFSMPARLGAGYIAED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            ++     +           + + ++    +         V++  +    +     Q  T
Sbjct: 501 NTKKIPVMLHRAILGSMERFIGILIEHHAGALPVWLSPDQVVVLNISR--NQADYVQSIT 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+   IR    L  ++    +++    +  P  I+ G  E     + ++  +     +
Sbjct: 559 NELKQNDIRVSSDL-RNEKISYKIREHSLQKVPYLIVVGDKEVENQTVTVRGRSNHDHGA 617

Query: 458 REIKNNESWREARVAQI 474
             ++   +     +A+ 
Sbjct: 618 MSLEGFVTLIRKEMAER 634


>gi|327252835|gb|EGE64489.1| threonyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 622

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 515 IWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 574 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 621



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 351


>gi|304382923|ref|ZP_07365405.1| threonine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335948|gb|EFM02196.1| threonine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 654

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/350 (9%), Positives = 102/350 (29%), Gaps = 19/350 (5%)

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
            +  + +     + +  E  +  +  M       V   +   +  +  R    G + +  
Sbjct: 311 HYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVFSWKPRSYKDLPLRIAEFGTVYRYE 370

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
             G+     R+      D       + VK                      + +  +  F
Sbjct: 371 KSGELHGLTRVRSFTQDDAHIFCRPEQVKSEFLRVMD------------IIQTVFKVFDF 418

Query: 244 LSIDLEKSMHELYELVKGTIAGE-KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            +++ + S+ +  +  K   + E    +E  +I     K          ++     L++ 
Sbjct: 419 KNVEAQISLRDPNDREKYIGSDEVWEHSEQSIIEACKEKGLNAKIAYGEAAFYGPKLDFM 478

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
                        +                  D         +    G     + +++  
Sbjct: 479 VKDAIGRRWQLGTIQVDYNLP-QRFKLEYTADDNSKQTPVMIHRAPFGSMERFTAVLI-- 535

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
               ++ +    + P  +  +          +     L + G+RA +    ++  G +++
Sbjct: 536 --EHTAGHFPLWLTPDQVAILPISEKFNDYARKVAHYLDSVGVRANID-ERNEKIGRKIR 592

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             + +  P  +I G  E + G++ ++    G++ +  +++  +     VA
Sbjct: 593 DNEIKRVPYMVIVGEKEAAEGLVSMRKQGGGEQATMSMEDFATRINEEVA 642


>gi|229828744|ref|ZP_04454813.1| hypothetical protein GCWU000342_00810 [Shuttleworthia satelles DSM
           14600]
 gi|229793338|gb|EEP29452.1| hypothetical protein GCWU000342_00810 [Shuttleworthia satelles DSM
           14600]
          Length = 597

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 62/212 (29%), Gaps = 7/212 (3%)

Query: 237 IDIMVSFLSIDLEKSMH-ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
            D + S   +     +     + +      +K   EL  I + +   G         +  
Sbjct: 348 ADEIYSTFGLSFRAELSTRPDDFMGDIATWDKAEAELREILDNMYGEGNYDVNEGDGAFY 407

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
              ++       +  LG        +      +  G +Y       K   +        +
Sbjct: 408 GPKIDLQ----MKDALGREWQMGTIQLDFQLPLNFGLKYAAQDGSEKQPVLIHRAIFGSM 463

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R I  L       +    + P  +  +   +   +  +   + LR+ GIR E    + K
Sbjct: 464 ERFIGILIE-NFKGSFPFWVSPYQVGIVPIRTSHNAYAEKIQEELRSMGIRVEADY-ADK 521

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           N   ++K       P  ++ G  E   G + +
Sbjct: 522 NMNEKIKRFRTLRDPYTLVIGDKEVENGTVSV 553



 Score = 44.4 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      +  ++ N +LD  R+++E + +  I  P++  +  L           + +F
Sbjct: 202 GMPYWLPRGWKLFNALLDYWRSVHERHNYLEIAAPVI-NNQKLWATSGHWGHYKENMF 258


>gi|32265941|ref|NP_859973.1| threonyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|73919797|sp|Q7VJ09|SYT_HELHP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|32261990|gb|AAP77039.1| threonyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 604

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 82/267 (30%), Gaps = 16/267 (5%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F   + + SE ++ ++ F    +          +        G +E+   +
Sbjct: 345 EFTQDDAHIFCMTSQIKSE-VNQILDFTKGIMNAFGFHYEMELSTRPQKSIGNDEVWENA 403

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ---KPVVFGSVGGGGR 333
               KS    N I        G  Y      +         +       +          
Sbjct: 404 TAALKSALEENHISYQIDEGGGAFYGPKIDIKITDALKRKWQCGTIQIDMNLPERFELSY 463

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    + +   +           + +  +              V++  +          
Sbjct: 464 TDEHNVQVQPVMIHRAILGSFERFVAILTEHFGGEFPLFIAPTQVILIPIGE------AQ 517

Query: 394 QMYTQMLRTAGIR-----AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             Y ++LR   I      AE+ +  +++   +++ A+++  PL ++ G  E    +L I+
Sbjct: 518 LEYARILRDKIITQSGAYAEL-MDKNESLSKKIRLAEKQRVPLIVVIGAKEVESKILAIR 576

Query: 449 DLAKGKELSREIKNNESWREARVAQIT 475
           D  +  +     +   +  + ++ +++
Sbjct: 577 DRREKSQYELPEEAFIATLKTKIGEVS 603


>gi|121603656|ref|YP_980985.1| prolyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|152112939|sp|A1VK86|SYP_POLNA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|120592625|gb|ABM36064.1| prolyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 581

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/113 (10%), Positives = 41/113 (36%), Gaps = 8/113 (7%)

Query: 7   LRAELPR----GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           +RA L +    G  +     +R+  ++   +R      G   +  P+++ ++ L +    
Sbjct: 27  MRAGLIKKLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAIEMSMPVIQPAE-LWQETGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            +     +  ++D  G+   ++    ++   + R    ++  +       +  
Sbjct: 86  FEAMGPELLRIKDRHGRDFVVQPTSEEVVTDVMRQDIRSYKQLPKNLYQIQTK 138


>gi|126178716|ref|YP_001046681.1| threonyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166225444|sp|A3CTJ9|SYT_METMJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125861510|gb|ABN56699.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Methanoculleus
           marisnigri JR1]
          Length = 611

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 53/157 (33%), Gaps = 20/157 (12%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALK--SLESSTNNIKEMGPVLITTMDHDSDSLS 391
           Y    +      +  +        +   L+  + +   +    + P  +  +      + 
Sbjct: 447 YAPDGTEVHPPILHCSPTGSIERVICAMLEGTAAQEVPSFPTWLAPTQVRLVPVAERHIC 506

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG--MLQIKD 449
             +     L  AGIRA++     ++   +++ A     P   + G  E   G  M+ I+ 
Sbjct: 507 FAEEIDTRLNAAGIRADVD-DRDESVNKKIREAGMDWVPYVAVIGDQEAETGRLMVTIRK 565

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           L++ K               +  + ++  SELV  VK
Sbjct: 566 LSEKK---------------KPFKESMTESELVQAVK 587


>gi|325293128|ref|YP_004278992.1| Threonyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060981|gb|ADY64672.1| Threonyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 667

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 46/397 (11%), Positives = 110/397 (27%), Gaps = 23/397 (5%)

Query: 98  NFDTIVFPCRTY-RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
           +             +     N        +   +   +  G      +    +  A    
Sbjct: 269 HGKGWRMFQTLTAYMRRRLANTYQEVNAPQVLDKSLWETSGHWGWYQENMFAVKSAHAFT 328

Query: 157 AVGIKRNDYHIG----INNRKILDGILEKIGLHGDD--KLNERLIVLRAIDKLDKFGLQG 210
               +  D  +     +N    +      +  + +   +L E   V R        GL  
Sbjct: 329 HPDDEDADQRVFALKPMNCPGHVQIFKHGLKSYREMPVRLAEFGNVHRYEASGALHGLMR 388

Query: 211 VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN 270
           V+    +       +    A        I+  +      + + +L    +  +  +  ++
Sbjct: 389 VRGFTQDDAHVFCTEEQMAAECLRINDLILSVYEDFGFSEIVVKLSTRPEKRVGSDDLWD 448

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
               +   V K+    +  +I + I+ G   + G  +E  L   +  E Q          
Sbjct: 449 RAESVMMEVLKTIEEQSGGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNL 508

Query: 331 GGRY-----DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
             R+     D    + +   +           L + +++             V++ T+  
Sbjct: 509 PERFGAFYIDQNSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPLQVVVATITS 568

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR----NCPLAIIQGTGERS 441
           D+D   +     + LR AG+  E    + K     + Y  R       P+ I+ G  E  
Sbjct: 569 DADDYGR--EVAEALREAGMAVETDFRNEK-----INYKVREHSVTKVPVIIVCGRKEAE 621

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
              + I+ L    +    +++  +          +  
Sbjct: 622 ERTVNIRRLGSQNQTPMSLEDAITSLVEEATPPDVKR 658


>gi|322833539|ref|YP_004213566.1| threonyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321168740|gb|ADW74439.1| threonyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 642

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 46/348 (13%), Positives = 94/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGTDEMWTRAEDDLAAALTENDIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLNASYIGESNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             M PV +  M+      +  +  T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWMAPVQVVIMNITDSQATYVEELTKKLQDAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K     R   + Q+ 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVVDKLLAEIRSRSLHQLE 641



 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 53/203 (26%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   ++Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKSYDYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA D L     +
Sbjct: 425 EKRIGTDEMWTRAEDDLAAALTE 447


>gi|317472458|ref|ZP_07931781.1| glycyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900076|gb|EFV22067.1| glycyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 463

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/228 (7%), Positives = 59/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      E     +      ++ + + +  ++     ++       +    +        
Sbjct: 238 EWFAYWKEFCINWLKTLGITDDQMRVRDHGKEELSFYSKATSDIEFLFPFGWGELWGIAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +       +     + +  +      ++ A   ++         + LE   
Sbjct: 298 RTDYDLTQHQNTSGEDLTYFDDEKKERYIPYVIEPSLGADRVTLAFLCAAYDEEELEGGD 357

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV I  +              + L       E       N G + +  
Sbjct: 358 KRTVLRFHPAIAPVKIGVLPLSKKLAEGAGKVYETL-AKYYNCE--YDERGNIGKRYRRQ 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + ++D    ++   +I++ + + E +  
Sbjct: 415 DEIGTPFCVTYDFDSEEDGAVTVRDRDTMEQERVKIEDLKEYFEKKFD 462


>gi|311030092|ref|ZP_07708182.1| prolyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 561

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 47/134 (35%), Gaps = 6/134 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++  ++ D +R   EN G   +  P ++ ++ L K           +  
Sbjct: 37  SGIYSFLPLGKKVLKKVEDVVREEMENAGAVELLMPAMQAAE-LWKESGRWYSYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           L D   +  +L     ++   L R   +++  +      Y+I   FR+EK       +  
Sbjct: 96  LNDRHNREFALGATHEEVITTLVRDEVKSYKKLP--LSLYQIQTKFRDEKRPRFGLLRGR 153

Query: 130 QCDVDNVGSSAETA 143
           +  + +  S    A
Sbjct: 154 EFLMKDAYSFHANA 167


>gi|260662523|ref|ZP_05863418.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553214|gb|EEX26157.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 627

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 59/199 (29%), Gaps = 5/199 (2%)

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
             +E+   S+ + K+  +S  +           Y      +        +E    +    
Sbjct: 416 ANDEMWERSQSMLKAAMDSMGLDYYEAEGEAAFYGPKLDIQTKT-ALGNDETMSTIQLDF 474

Query: 328 VGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
           +         V     Q+ P     G    + R +  L  +             +     
Sbjct: 475 MLPEKFDLHYVGEDGKQHRPVMIHRGVVGTMERFVAYLTEIYKGAFPTWLAPNQVNIIPV 534

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D           +  R A +R  +   S K  G +++ +  +  P  ++ G  E + G 
Sbjct: 535 SDEKHGDYADDLAREFRAAQLRTVVDHRSEK-MGYKIRESQTQKVPYTLVVGEDEVANGT 593

Query: 445 LQIKDLAKGKELSREIKNN 463
           + ++   +  ++S   ++ 
Sbjct: 594 VSVRKYGEKDQVSMSKQDF 612



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 56/186 (30%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   + +     G++ + TP+L   D+  K     D   + +F  
Sbjct: 243 GLPYWMPKGSTIRRTIERYVIDKEVGDGYEHVYTPVLMNLDAY-KTSGHWDHYREDMFPP 301

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 302 MDMGDGELLELRPMNCPSHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 361

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A++  ++ D  +   I    + +   + K  +       + 
Sbjct: 362 MTLNDGHTFVALDQIQDEFAKILKLIMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMW 421

Query: 186 GDDKLN 191
              +  
Sbjct: 422 ERSQSM 427


>gi|260597637|ref|YP_003210208.1| threonyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216814|emb|CBA30296.1| Threonyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 642

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 89/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGTDEMWDRAEADLAVALEENNIPFEYQPGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPARLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSEYVNELTRKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 632



 Score = 41.4 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHVFCTEEQVRDEVNSCI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 425 EKRIGTDEMWDRAEADLAVALEENN 449


>gi|257867713|ref|ZP_05647366.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874040|ref|ZP_05653693.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257876619|ref|ZP_05656272.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257801796|gb|EEV30699.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808204|gb|EEV37026.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257810785|gb|EEV39605.1| prolyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 569

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 57/536 (10%), Positives = 124/536 (23%), Gaps = 78/536 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   IR          +  P L   +   K         + ++ L
Sbjct: 38  GIYVYLPLAQRVLEKIKRVIREELAQIDAVEMAMPSLLPYEP-WKESGRASLYGESLYRL 96

Query: 74  QDDDGQWISLRY------------DLTA----PLARYVAENFDTIVFPCRTYRIGPVFRN 117
            D + + I L              ++T+    PL+ Y  +         R   +      
Sbjct: 97  TDRNEREIVLGPTHEEPFTTLIKNEITSYKRLPLSLYQIQTKYRDEQRPRFG-LIRSREF 155

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
                  F                   A +     +    VG               L G
Sbjct: 156 IMQDGYSFHADEASLDQTYNRYEMAYHAILKRCGIEYRAVVGDNGLMGGRDSKEFLALSG 215

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQ--------------GVKLLLGEGRTDNS 223
           I E++  +  +        L     + K   +               ++ L     TD  
Sbjct: 216 IGEELICYSTESDYVANWKLATSQYIAKKSHETYLELQKVVQDEPLTLEELAQAYETDLQ 275

Query: 224 GDFTKGANLTSEQI-------------DIMVSFLSIDLEKSM------------HELYEL 258
                   L  EQ+               +  +L+ D  K +             +L   
Sbjct: 276 KIVQVSLLLVDEQVIMVLLRGDHSLNETKVKHYLAADQVKVLTVEEAESYLTSETQLRSP 335

Query: 259 VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
           +    + +   ++ V     +           +++ + R  +      +  +       +
Sbjct: 336 IALADSIQLYADQHVQDMANLIVPAAEKQSYYLNANVGRDFQPLAFADFRLVQEGDPSPD 395

Query: 319 KQKPVVFGSVGGGGRY----------DGLVSRFKGQNVPATGFSIGISRLIVAL------ 362
            +  + F      G                   +  +            +   L      
Sbjct: 396 GKGTLTFTRGIEVGHIFKLGTKYSEAQEATVVDENGDEQPIIMGCYGLGVSRLLSTIVEQ 455

Query: 363 --KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGN 419
                            V I     +    +      + +    G +  +   + +  G 
Sbjct: 456 YGNEFGIDWPQEIAPFDVHIIQTSIEDSYQNALSEEVEEMMNQVGYQVLVDDRNERA-GV 514

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   AD   CP+ +  G      G+++IK    G  +    +   S     +A   
Sbjct: 515 KFADADLIGCPIRLTIGKKAVE-GIVEIKIKHTGATVEVRKEEVASTLTILLANQE 569


>gi|220912189|ref|YP_002487498.1| prolyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859067|gb|ACL39409.1| prolyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 599

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 32/99 (32%), Gaps = 1/99 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +   +         V +  +    D  +  +  +  L  AG+          + G +  
Sbjct: 489 DAKGLTWPRAVAPADVHVVAVGKGEDIFAAAEQLSVGLEAAGLDVIYDDRFKVSPGVKFG 548

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            A+    P  +  G      G+++IKD   G+  +  + 
Sbjct: 549 DAELLGVPTILAVG-RGLVDGVVEIKDRRTGEAENVAVD 586



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        + +  ++   IR      G   +  P L   E  ++  ++        +G+
Sbjct: 36  GIYTWLPLGLSVLRKVEQVIREEMAAIGAQEVHFPALLPREPYEATNRWTE----YGEGL 91

Query: 71  FSLQDDDGQWISLRY 85
           F LQD  G    L  
Sbjct: 92  FRLQDRKGADYLLAP 106


>gi|126659940|ref|ZP_01731064.1| prolyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126618804|gb|EAZ89549.1| prolyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 598

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 68/250 (27%), Gaps = 7/250 (2%)

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           NL  E I     ++     + + +    ++  + G    N  +V     +          
Sbjct: 350 NLEDEYIAS-GEYIEGKFLRIVDKTVVDLENFVTGADEINYHIVGGNWNKDFKLPQLVCD 408

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           I + ++     +      A      +    +     S   G  +       K   +   G
Sbjct: 409 IRTAMIGDRAIHDRSQTLASARGIEVGHIFQLGTKYSEAMGATFTDENGEEKPIVMGCYG 468

Query: 351 FSIGISRLIVALKSLES----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
             +         +S +         I     ++I     D + +   +     L   GI 
Sbjct: 469 VGVSRLAQAAVEQSYDKDGIIWPVAIAPYHVIIIVPNIKDKNQIEVAENLYNELNKIGIE 528

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +     +  G + K AD    P  ++ G      G +++      +    E+ N    
Sbjct: 529 TMLDDRDERA-GVKFKDADLIGIPYRVVTGRS-LKAGKVEVVTRKSKESQEIEVTNLVET 586

Query: 467 REARVAQITI 476
               V Q  +
Sbjct: 587 LHNWVEQAKV 596



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 4/76 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ S+ L K     +   K    
Sbjct: 32  SGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQLQPSE-LWKESGRWETYTKAEGI 90

Query: 70  VFSLQDDDGQWISLRY 85
           +FSL D   + + L  
Sbjct: 91  MFSLIDRQERELGLGP 106


>gi|261838989|gb|ACX98754.1| threonyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 612

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 52/120 (43%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +  +      ++L+   I  E+ L  + 
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHAFALKLKEVLKKCDIFVEV-LDKND 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K      + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATSALKEALKEHRIGYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E+   E
Sbjct: 463 NLPERFKLAFTNERNHAE 480


>gi|293396370|ref|ZP_06640648.1| threonine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421159|gb|EFE94410.1| threonine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 387

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 95/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 42  FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMG 101

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + +E  + +     +       +
Sbjct: 102 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQVRAEVNECIRMVYDVYGTFGFEK 160

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +++   +E    +    N I        G  Y     +       
Sbjct: 161 IAVKLSTRPEKRIGTDDMWTRAEEDLAAALTENGIPFEYQPGEGAFYGPKIEFTLHDCLD 220

Query: 315 VMNEKQ--KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              +    +   F     G  Y G  +      +        + R I  L    +     
Sbjct: 221 RAWQCGTVQLDFFLPGRLGASYVGENNERVVPVMIHRAILGSMERFIGILTEEYAGFYP- 279

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 280 TWIAPVQVVVMNITDSQSDYVQQLTKKLQDAGIRVKADL-RNEKIGFKIREHTLRRVPYM 338

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  +  R   + Q+ 
Sbjct: 339 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNEVVDKLQKEIRSRSLHQLE 386



 Score = 40.2 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 51/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 1   MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 59  KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLHG 117

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   + + +  V      +          + I  K+    
Sbjct: 118 LMRVRGFTQDDAHIFCTEDQVRAEVNECIRMVYDVYGTF--------GFEKIAVKLSTRP 169

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA + L     +
Sbjct: 170 EKRIGTDDMWTRAEEDLAAALTE 192


>gi|261837575|gb|ACX97341.1| threonyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 612

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKCDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVESEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 70/258 (27%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATSALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E+   E
Sbjct: 463 NLPERFKLAFTNERNHAE 480


>gi|302561695|ref|ZP_07314037.1| threonyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302479313|gb|EFL42406.1| threonyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 658

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 36/103 (34%), Gaps = 2/103 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +   + +    R  G+R E+   S +    +++   +   P  I
Sbjct: 556 WLAPVQAVGIPVGDAHVEYLEKFATEARQKGLRVEVDSSSDR-MQKKIRTQQKLKVPFMI 614

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           I G  + + G +  +    G + +   +     +   V +  +
Sbjct: 615 IVGDEDMNAGTVSFRY-RDGSQENGIPREQALAKLLDVVERRV 656


>gi|229496735|ref|ZP_04390446.1| prolyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316281|gb|EEN82203.1| prolyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 517

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 45/135 (33%), Gaps = 22/135 (16%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L+  +       + LR  GI  ++    +K  G + 
Sbjct: 317 GLVLPPSLAPIQVVIVPIYKTEEHLATIRERVEPLIKDLRARGISVKLDDNDNKKPGWKF 376

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + +  P+ +  G  +  +G +++                   R   + + T+    +
Sbjct: 377 AEYELKGIPVRLALGARDLEQGTVEV------------------ARRDTLTKETVAFEGI 418

Query: 482 VSTVKKILQENKEEI 496
              ++ +LQ  ++ I
Sbjct: 419 ADHIESLLQSIQKNI 433


>gi|156742938|ref|YP_001433067.1| proline--tRNA ligase [Roseiflexus castenholzii DSM 13941]
 gi|156234266|gb|ABU59049.1| Proline--tRNA ligase [Roseiflexus castenholzii DSM 13941]
          Length = 564

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 39/125 (31%), Gaps = 19/125 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +  +     +          L  AGI   ++   ++  G +  
Sbjct: 458 DQAGIVWTPETAPFDVHLIRLGKQDATRQAADALYDELIAAGIAV-LYDDRNETAGVKFN 516

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            AD    PL ++ G    + G+++IK  A G                      +P  E++
Sbjct: 517 DADLIGLPLRLVIGDRFLTDGLVEIKQRATG------------------MITKMPRQEII 558

Query: 483 STVKK 487
           + V+K
Sbjct: 559 AEVQK 563


>gi|118475741|ref|YP_892822.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414967|gb|ABK83387.1| threonyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 617

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/145 (8%), Positives = 50/145 (34%), Gaps = 3/145 (2%)

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           G  D    R +   +           + + L+                +  +   ++   
Sbjct: 476 GYIDENNERKQPVMLHRAIMGSFERFIGILLEHTAGELPFWIAPTQ--VVIIPISNEHHK 533

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                  +L    + +E+    ++    +++ A+++  P+ I+ G  E +   + ++D  
Sbjct: 534 YANEVHSLLLDMDVDSEI-FNKNETLNKKIRTAEKQRVPMIIVLGDNEVTNRGVALRDRR 592

Query: 452 KGKELSREIKNNESWREARVAQITI 476
             ++    +     + ++++ ++ I
Sbjct: 593 AREQKDMSLDEFLGFIQSKLNEVNI 617



 Score = 40.2 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R+R+   +   +   G++P+  P +  SD+  K         + ++  
Sbjct: 243 GLPIWLPNGARLRSRLEHKLYRTHRLRGYEPVRGPEILKSDA-WKISGHYANYKENMY-F 300

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q   ++      
Sbjct: 301 TVIDEQEYGIKPMNCVG 317


>gi|329725453|gb|EGG61936.1| putative glycine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 310

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/219 (9%), Positives = 51/219 (23%), Gaps = 4/219 (1%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E    +  +    +  +                   K            +   Y+     
Sbjct: 95  EWLTDLNISEDNMRLRDHDEDELSHYSN-ATTDIEYKFPFGWGELWGIASRTDYDLRQHS 153

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               E  K     +      Y    S    +   A          +   K   +  +   
Sbjct: 154 EHSGEDFKYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYAEEGVEGSKDARTVMHFHP 213

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P     +       S+     + L +      +    S++ G + +  D    P  I
Sbjct: 214 ALAPYKAAVLPLSKKLSSEAIKIFEQLSS---SFAIDFDESQSIGKRYRRQDEIGTPYCI 270

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + ++D    +++   I   E++   +V 
Sbjct: 271 TFDFDSLEDNQVTVRDRDSMEQVRMPISELETFLAEKVK 309


>gi|320586315|gb|EFW98994.1| threonyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 524

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 21/128 (16%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ NR++D +R  Y  YGF  + TP + Y  +L       +     +F++
Sbjct: 95  GSPIFLPNGARVFNRLVDFLRKQYVRYGFQEVITPTI-YKKALWAKSGHLENYADDMFTV 153

Query: 74  Q-------DDDGQ------------WISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGP 113
                   +  G+               L+          + A+       P R     P
Sbjct: 154 TSASLATGERRGEGGATPGPQDLEDEYGLKPMNCPGHCLIFAAQRHSYRDLPIRYADFSP 213

Query: 114 VFRNEKHG 121
           + R+E  G
Sbjct: 214 LHRDELSG 221


>gi|301303993|ref|ZP_07210111.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300840790|gb|EFK68550.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1]
          Length = 429

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 84  FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 143

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 144 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 202

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 203 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 262

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 263 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 321

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 322 TWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 380

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 381 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 428



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 43  MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 100

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 101 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 158


>gi|89898569|ref|YP_515679.1| prolyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|114152181|sp|Q253K4|SYP_CHLFF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|89331941|dbj|BAE81534.1| prolyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 577

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 3/136 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVAL-KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            +         G    ++  +  L                + I     DS S    +   
Sbjct: 436 QQTCWMGTYGIGIGRTLAACVEQLADDRGIVWPKAIAPFDISILYNGGDSASQEAAEKIY 495

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+ +G  A +    ++  G +LK +D    P  +I G    + G L+I+    G++ S
Sbjct: 496 TELQNSGY-APLLDDRNERLGFKLKDSDLIGIPYKLILGKTFLNSGTLEIES-RSGEKFS 553

Query: 458 REIKNNESWREARVAQ 473
            + K+   W E  + Q
Sbjct: 554 VQPKDFVHWCENYLPQ 569



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL-PDEDRP 66
             +  +G         R+  +++D +R      G   +  P+L  ++   K    +  R 
Sbjct: 32  IFKTAKGVYTYTPLFWRVALKMMDIVREELNAIGGQELMLPILHPAELWQKTGRWEAFRS 91

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +++L D + + + L  
Sbjct: 92  EGLLYTLTDREDKELCLAP 110


>gi|14521178|ref|NP_126653.1| prolyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|74581662|sp|Q9V022|SYP_PYRAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|5458396|emb|CAB49884.1| proS prolyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 480

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 73/248 (29%), Gaps = 27/248 (10%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             E +         E+   E + I + + K    +  I       +    +     E ++
Sbjct: 158 FFEAHTAHADFEDAERQIKEDLEIFDNLMKRLAIAYIISKRPEWDKFPGAFYSLGAEVVM 217

Query: 312 GFPVMNEKQKPVVFGSVGGGGR---YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                 +      +           Y+         +    G S  +   ++A+   +  
Sbjct: 218 PDGRTLQIGTMHNYKQNFAKAYNILYEKEDGTHDYVHQTTFGMSERLLAAVIAIHGDDRG 277

Query: 369 TNNIKEMGPVLITTMD-----HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                 + P+ +  +               +   + LRTAGIR  + +   +  G +   
Sbjct: 278 MVLPPTIAPIQVVIVPIPKKEKQEIVYEYAREIEEELRTAGIRVHLDMREKR-PGWKFYD 336

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  P+ I  G  +     + +                   R  ++ +ITI   ELV 
Sbjct: 337 WELKGVPVRIEVGPRDVENSTVVL------------------ARRDKLEKITIKREELVD 378

Query: 484 TVKKILQE 491
            V+++  +
Sbjct: 379 KVRELFDD 386



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 19/80 (23%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        ++I   I   I    E  G   +  P L       K           V
Sbjct: 30  PVKGMNVWLPYGLKIMKNIEKFIHEEMERTGHQEVLFPALIPETEFKKEAEHIAGFEGEV 89

Query: 71  FSLQDDDGQW-----ISLRY 85
           F      G       + LR 
Sbjct: 90  F-WITHAGHEPLDVKLILRP 108


>gi|320155572|ref|YP_004187951.1| prolyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319930884|gb|ADV85748.1| prolyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 571

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLP--INLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 26/90 (28%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSERVQEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G  + K+   G++    + +     +A+
Sbjct: 540 DEGHFEYKNRRSGEKTPVAMADIVEHIKAQ 569


>gi|296125160|ref|YP_003632412.1| prolyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296016976|gb|ADG70213.1| prolyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 578

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 41/124 (33%), Gaps = 10/124 (8%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYAD 425
               ++     +++       +S  K +     L    ++ E      K   G +L   D
Sbjct: 464 IFPISVAPYEAIVVAIDKEGEESFKKAEEIYNAL--NALKVETMFDDRKERLGVKLNDCD 521

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
               P+ I+ G     RG+++ K  +  + +  +      + +A          EL + +
Sbjct: 522 LIGIPMRIMVGKKSLQRGVVEFKLRSSSESIEVKADEIVEYVKA-------KKEELFNEI 574

Query: 486 KKIL 489
              L
Sbjct: 575 NSKL 578



 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ ++I + IR   +  G +    P+L   + L       +R  K +F L
Sbjct: 38  GLYSYLPLGVRVLSKISNIIREEMDAIGSNECIMPILVSKELLTPS-GRWERFKKELFRL 96

Query: 74  QDDDGQWISLRY 85
           +D +   +++  
Sbjct: 97  KDRNDVDMAMGP 108


>gi|301327449|ref|ZP_07220684.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|309793489|ref|ZP_07687916.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|312969746|ref|ZP_07783929.1| threonyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|300845961|gb|EFK73721.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|308123076|gb|EFO60338.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|310338031|gb|EFQ03120.1| threonyl-tRNA synthetase [Escherichia coli 1827-70]
          Length = 622

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 574 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 621



 Score = 38.7 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 351


>gi|323474896|gb|ADX85502.1| prolyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 481

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 77/256 (30%), Gaps = 28/256 (10%)

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           +  E + + +     ++   E + I + +  +      +       R         ++ I
Sbjct: 159 TFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAGALHTYAFDTI 218

Query: 311 LGFPVMNEKQKPVVFGSVGGGG---RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +    + +       G         +           +  + G S      ++A+   + 
Sbjct: 219 MPDGKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISDRAIASVIAIHGDDH 278

Query: 368 STNNIKEMGPVLITTMDHDSDS-------LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  + P+ +  +   + +       +       +ML    I       + K  G +
Sbjct: 279 GPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIEICEMLNKNNITCVTDQDTEKTPGEK 338

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               + +  P+ +  G  E +   + IK                  R   +   T+   E
Sbjct: 339 FYIWEIKGVPIRLEIGPRELASSTVFIK------------------RRDNLKSYTVKKEE 380

Query: 481 LVSTVKKILQENKEEI 496
           +V+ VK++L E +E++
Sbjct: 381 VVNKVKEVLNEIQEDL 396



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 63/191 (32%), Gaps = 13/191 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         ++R  I+  IRN+ ++ G + +  PLL   D L +         + V
Sbjct: 32  PVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEV 91

Query: 71  FSLQDDDGQW-----ISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
           F      G       ++LR   T+ +A    EN     +     + Y+I  VFR E    
Sbjct: 92  F-WVTKGGSEDLDVKLALRP--TSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT 148

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILE 180
               +  +        +      +    + + +E      N+      ++ R   D    
Sbjct: 149 RPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAG 208

Query: 181 KIGLHGDDKLN 191
            +  +  D + 
Sbjct: 209 ALHTYAFDTIM 219


>gi|300904575|ref|ZP_07122412.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300403488|gb|EFJ87026.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|315257476|gb|EFU37444.1| threonyl-tRNA synthetase [Escherichia coli MS 85-1]
          Length = 622

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 574 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 621



 Score = 38.7 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 351


>gi|229061422|ref|ZP_04198767.1| Prolyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717845|gb|EEL69493.1| Prolyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 566

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ S+ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQASE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +        L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKSVAPFHVHVIPVNMKSDAQREMGGNIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|120437069|ref|YP_862755.1| prolyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|152112923|sp|A0M4Z3|SYP_GRAFK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117579219|emb|CAL67688.1| prolyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 492

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 73/264 (27%), Gaps = 33/264 (12%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E ++ T      + E       +             +   R    
Sbjct: 168 EFLWQEGHTAHATKDEALEETELMNNIYAEFAENFMAM------PVVKGSKTESERFAGA 221

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G            ++  G            +RL+ A
Sbjct: 222 LETYCIEALMQDGKALQAGTSHFLGQNFAEAFDVKFATKEGGLEHVWATSWGVSTRLMGA 281

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +    + L +         + LR  G+  +    
Sbjct: 282 LIMTHSDDNGLVLPPNLAPIQVVIVPIYRSEEQLDQISEVANELVKELRAVGVSVKFDNN 341

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            ++  G +    + +  PL +  G  +  +G +++                   R   + 
Sbjct: 342 DNQKPGWKFAQYELQGVPLRLAIGPKDLEKGTVEL------------------ARRDTLT 383

Query: 473 QITIPISELVSTVKKILQENKEEI 496
           +  +  SE+V  +K ++ E ++ +
Sbjct: 384 KEFVNRSEVVEKIKALMTEIQDSL 407


>gi|27365189|ref|NP_760717.1| prolyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81844691|sp|Q8DBH9|SYP_VIBVU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27361336|gb|AAO10244.1| prolyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 571

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLP--INLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 26/90 (28%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSERVQEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G  + K+   G++    + +     +A+
Sbjct: 540 DEGHFEYKNRRSGEKTPVAMADIVEHIKAQ 569


>gi|37680756|ref|NP_935365.1| prolyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|81859846|sp|Q7MIE5|SYP_VIBVY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|37199505|dbj|BAC95336.1| prolyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 571

 Score = 53.3 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R   +N G      P+++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWLPTGLRVLRKVENIVRQEIDNAGAIETLMPVVQPFE-LWEETGRSEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +    D   +   L     ++   L R    ++  +      Y+I   FR+E+    
Sbjct: 90  GPELLRFTDRHVRPFVLSPTAEEVITALVRNEVSSYKQLP--INLYQIQTKFRDERRPRF 147

Query: 124 RFRQFIQCDV 133
              +  +  +
Sbjct: 148 GVMRAREFCM 157



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L   GI   +F    +  G      +    P  I+ G    
Sbjct: 481 MNMHKSERVQEAAEKLYAELTAMGIEV-LFDDRKERPGVMFSDMELIGIPHTIVIGDRSM 539

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G  + K+   G++    + +   + +A+
Sbjct: 540 DEGHFEYKNRRSGEKTPVAMADIVEYIKAQ 569


>gi|332529095|ref|ZP_08405059.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332041318|gb|EGI77680.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 644

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 69/258 (26%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y   G+  ++ P +    SL +     D+  + +F+ 
Sbjct: 261 GTVFWHPKGWTVWQEVEQYMRRVYRENGYREVKGPQI-LDKSLWEKTGHWDKYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKRDYALKPMNCPG-------HILIYKQGVKSYRDLPLRYGEFGACHRNEPTGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    D  +          V    +       +    + I +          +E 
Sbjct: 372 IMRVRAFTQDDGHIFCTEDQIQAEVKAFTSLLQKVYKDFGFTEIIYKLSTRPEKRIGSEE 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                + D+ +    +G++    E           G  +     D +         +   
Sbjct: 432 -----SWDRAENALAEGLRASGCEFDYLPGEGAFYGPKIEYTLKDALGRQWQCGTIQVDP 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E +     GE G   
Sbjct: 487 NLPERLDAEFVGEDGGRH 504


>gi|218883366|ref|YP_002427748.1| glycyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218764982|gb|ACL10381.1| Glycyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 583

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 29/106 (27%), Gaps = 5/106 (4%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDS---LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           L+   +       V         +    +   +   + L T G R         + G + 
Sbjct: 467 LKLPVHLAPYHVAVFPLVTGKKQEHARIIEIARNIYRRLITRGFRVI--YDDDGSIGRRY 524

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
              D    P A+         G + ++D     +   +I   E + 
Sbjct: 525 ARVDEIGIPYAVTVDYQTLEDGTVTVRDRDSSLQERVKIDELEKYL 570


>gi|167520264|ref|XP_001744471.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776802|gb|EDQ90420.1| predicted protein [Monosiga brevicollis MX1]
          Length = 473

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 3/148 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +RI  R+   +R ++ NYGF+ +++PL+ Y   L       +  ++ +  L
Sbjct: 91  GAPFWLPHGLRIFKRLEALVRGVHSNYGFEEVKSPLV-YKQHLWNTSGHWEHYSEDMTVL 149

Query: 74  QDDDGQWIS--LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
           Q  + + +   L+           +    +       +         +            
Sbjct: 150 QHKEDEEVCQALKPMNCPAHCIMFSHEPHSYRELPLRFAEHSALHRNEASGALSGLTRVR 209

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVG 159
                         ++   +A  LEA+G
Sbjct: 210 QFHQDDGHIFCRPDQVSSEVARCLEAIG 237


>gi|163941557|ref|YP_001646441.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|226731430|sp|A9VT57|SYP_BACWK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|163863754|gb|ABY44813.1| prolyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 566

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/250 (10%), Positives = 76/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ S+ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQASE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYSGLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I  EK +  +
Sbjct: 272 IAAEKCIKSM 281



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKSVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|255320853|ref|ZP_05362027.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262380254|ref|ZP_06073409.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302022|gb|EET81265.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298448|gb|EEY86362.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 640

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 68/242 (28%), Gaps = 15/242 (6%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    ++   +        G + L  ++E   
Sbjct: 381 DDAHIFCTKEQIGPEVADFIKLTLDVYKDFGFEDVQMKLSTRPEKRVGDDALWDMAEKSL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG--GGRYDGLV 338
               ++  ++       G  Y     +        +    +                  V
Sbjct: 441 ADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPERLDASFV 497

Query: 339 SRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           +    ++ P            R I  L    +       + PV    M+         + 
Sbjct: 498 TEDNERDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLAPVQACVMNITDSQAQACEQ 556

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----KDL 450
               L+  GIRA   L  ++  G +++       P  ++ G  E   G + +     K+L
Sbjct: 557 VVAKLKENGIRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNL 615

Query: 451 AK 452
             
Sbjct: 616 GT 617



 Score = 40.6 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 ADNMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|90961542|ref|YP_535458.1| prolyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|114152204|sp|Q1WUG0|SYP_LACS1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|90820736|gb|ABD99375.1| Prolyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 571

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 76/259 (29%), Gaps = 6/259 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+  +I + IR   +      +  P +  ++ L +     +     
Sbjct: 34  QITAGMYAYLPLAYRVMKKIENIIREEMDRIDAVEMLVPAVVPAE-LWQESGRYETYGPT 92

Query: 70  VFSLQDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +F L+D   +   L    + T   + R   +++  +       ++     N         
Sbjct: 93  LFKLKDRHERDFILGPTHEETFTTIVRDAIKSYKKLPLYLYQIQMKYRDENRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +             + +  ++        + +  +   D+   I +   + G   K    
Sbjct: 153 REFLMLDGYSFHVDDASMEKVFNDTDKAYQRIFERCGLDFRGIIADSGAMGGNRSKEFQA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +   + +    + D      +    L + +   +   D  K A   ++ I  +  FL 
Sbjct: 213 IAEVGEDTIAYSDSSDYAANIEMAKN-LRIPKQSHETPKDLEKVATPNAKTIVEVAEFLG 271

Query: 246 IDLEKSMHELYELVKGTIA 264
            D +  +  L  +      
Sbjct: 272 TDTQNEIKTLLFIADDEPV 290



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 52/145 (35%), Gaps = 8/145 (5%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSD 388
           D L    +   +    + IG+SRL+ A+          +    I      ++     +  
Sbjct: 425 DVLDENGRQVPMRMGCYGIGVSRLLSAIVEQHNDENGIAWPREIAPFDIHVVPVNVKNDT 484

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                +  T ML  AG +  +     +  G +   +D    P+ I  G      G+++IK
Sbjct: 485 QRELSEKVTAMLEDAGYQVLVDDRKERA-GVKFADSDLIGLPIRITVGKK-ADEGIVEIK 542

Query: 449 DLAKGKELSREIKNNESWREARVAQ 473
               G+++  +++   +  +    +
Sbjct: 543 LRQNGEKIEVKLEELLNSVKILFNE 567


>gi|237800833|ref|ZP_04589294.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331023690|gb|EGI03747.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 192

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 8/128 (6%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARY 94
            I+   G +    P L   D+  +     +     +++  D  G+   L  + TA     
Sbjct: 9   AIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIG-QMWAFNDKAGRACCLIPEATA----L 63

Query: 95  VAEN---FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
             E              + +   +R E+   GR+R+F Q  ++ +G S + A      + 
Sbjct: 64  FQERSEVLLKGRSEAMFFYVARCYRYERPQAGRYREFTQLGLEILGPSPQQALLRSQAIC 123

Query: 152 ADTLEAVG 159
              L+ +G
Sbjct: 124 TGFLDLLG 131


>gi|229134626|ref|ZP_04263436.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648887|gb|EEL04912.1| Prolyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 566

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/250 (10%), Positives = 76/250 (30%), Gaps = 6/250 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ S+ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQASE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  ++D + +  +L     ++   L R   +++  +       +                
Sbjct: 93  LMRMKDRNAREFALGATHEEVITDLVRDEIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + + +  E+   +      +  +   ++   I +   + G      + 
Sbjct: 153 REFLMKDAYSFHATQESLDEVYSGLYKAYSNIFARCGLNFRAVIADSGAMGGKDTHEFMV 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D   + +      D      +  V     +   +      K A    + I+ + +FL+
Sbjct: 213 LSDVGEDTIAYSDTSDYAANIEMAPVVATYTKSD-EAEKALEKVATPDQKAIEEVSAFLN 271

Query: 246 IDLEKSMHEL 255
           I  EK +  +
Sbjct: 272 IAAEKCIKSM 281



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|238484021|ref|XP_002373249.1| threonyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220701299|gb|EED57637.1| threonyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 526

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 52/447 (11%), Positives = 116/447 (25%), Gaps = 70/447 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          + N+++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 80  GSPLFLPNGTHVINKLVSFLRTQYLQYGFREVLTPTI-YKRSLWEVSGHWQNYKDDMYEV 138

Query: 74  QDDD-----------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +               +   L+          + ++N      P R     P+ RNE  G
Sbjct: 139 RGRGAMGETEGEAGEDESYGLKPMNCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEVSG 198

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
                      V                + ++   A+G    D  +          +L  
Sbjct: 199 SLSGLTR----VRRFHQDDGHIFCRPQQIKSEIASALGFV--DMVMTTFGLGPYRLVLST 252

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                     + +  L   D  +    + +     E   +       G  +  +  D   
Sbjct: 253 ------RPEKDFIGSLELWDSAESQLREALDNSGREWALNEGDGAFYGPKIDIQLQDQAG 306

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +  +   +    L +              L        +    +   +    +V    +
Sbjct: 307 KYHQLSTIQLDMNLPQRFG-----------LEYQVAEGEEDYNPATPGRARPVLVHRANF 355

Query: 302 YTGCVYEAILGFPVMNE--KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            +   + A+L                G V    + + ++ +        +GF        
Sbjct: 356 GSIERFLALLIEQYAGRWPFWLSPRQGIVLTVNQDEKVLQQAHEAAAKISGFR------- 408

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            AL+  +S  N  + +  V  T +                     I  +    S +  G 
Sbjct: 409 -ALEPGQSGNNAPQPLSFVDSTFL---------------------IDVD---DSPQTLGK 443

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ 446
           +++ A +       I G  + +   + 
Sbjct: 444 KIQRAKQMKYNFIFIVGPKDVAESRVT 470


>gi|169767186|ref|XP_001818064.1| threonyl-tRNA synthetase [Aspergillus oryzae RIB40]
 gi|83765919|dbj|BAE56062.1| unnamed protein product [Aspergillus oryzae]
          Length = 526

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 52/447 (11%), Positives = 116/447 (25%), Gaps = 70/447 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          + N+++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 80  GSPLFLPNGTHVINKLVSFLRTQYLQYGFREVLTPTI-YKRSLWEVSGHWQNYKDDMYEV 138

Query: 74  QDDD-----------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +               +   L+          + ++N      P R     P+ RNE  G
Sbjct: 139 RGRGAMGETEGEAGEDESYGLKPMNCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEVSG 198

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
                      V                + ++   A+G    D  +          +L  
Sbjct: 199 SLSGLTR----VRRFHQDDGHIFCRPQQIKSEIASALGFV--DMVMTTFGLGPYRLVLST 252

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                     + +  L   D  +    + +     E   +       G  +  +  D   
Sbjct: 253 ------RPEKDFIGSLELWDSAESQLREALDNSGREWALNEGDGAFYGPKIDIQLQDQAG 306

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +  +   +    L +              L        +    +   +    +V    +
Sbjct: 307 KYHQLSTIQLDMNLPQRFG-----------LEYQVAEGEEDYNPATPGRARPVLVHRANF 355

Query: 302 YTGCVYEAILGFPVMNE--KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            +   + A+L                G V    + + ++ +        +GF        
Sbjct: 356 GSIERFLALLIEQYAGRWPFWLSPRQGIVLTVNQDEKVLQQAHEAAAKISGFR------- 408

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            AL+  +S  N  + +  V  T +                     I  +    S +  G 
Sbjct: 409 -ALEPGQSGNNAPQPLSFVDSTFL---------------------IDVD---DSPQTLGK 443

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ 446
           +++ A +       I G  + +   + 
Sbjct: 444 KIQRAKQMKYNFIFIVGPKDVAESRVT 470


>gi|330507921|ref|YP_004384349.1| glycyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928729|gb|AEB68531.1| glycyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 581

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 20/124 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                      V +  +   S+ +   +   + LR+ G+R      +S + G + +  D 
Sbjct: 460 LRFKPQVAPIEVAVLPLMDRSELVGPAKKILEELRSRGMRT--DYDTSGSIGRRYRRNDE 517

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  +         G + I+D                     ++Q+ +   ++V  ++
Sbjct: 518 IGTPYEVTIDYETIEEGTVTIRDRDS------------------MSQVRVARWQVVDKLQ 559

Query: 487 KILQ 490
            +L 
Sbjct: 560 ALLN 563



 Score = 41.0 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 20/68 (29%), Gaps = 9/68 (13%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL---PDEDRPN-- 67
          GF D       ++ RI D  R  +    GF  IE P +                D     
Sbjct: 29 GFYDYGPLGAPLKRRIEDIWRQYFVIAEGFAEIEAPTIGVEGIFQASGHLSGFSDPLTGC 88

Query: 68 ---KGVFS 72
             K V+ 
Sbjct: 89 KECKEVYR 96


>gi|324505892|gb|ADY42525.1| Threonyl-tRNA synthetase [Ascaris suum]
          Length = 706

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/162 (9%), Positives = 40/162 (24%), Gaps = 20/162 (12%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           +D    R +   V             +  ++               + T+          
Sbjct: 558 FDENNERKRPVMVHRALLGSIERMTAILTENFGGKWPFWLSPRQAKVITVH--ESQRVYA 615

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + L  AG   E     S     Q++ A        ++ G  E   G + ++     
Sbjct: 616 KEVQKKLYEAGFEVEFDEMCSDTLNKQIRNAQLAQFNFILVVGPKEAQNGTVNVR----- 670

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
                              +  + + +L+    +   E  ++
Sbjct: 671 -------------TRDNAVRGEVKLDDLIEKFTRFRDEYLKD 699



 Score = 42.1 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 33/106 (31%), Gaps = 3/106 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   I N + + +RN Y   GF  + +P + ++  L +        + G+F +
Sbjct: 321 GAAFWYPKGAHIYNTLCNFMRNQYRKRGFTEVISPNM-FNSKLWEQSGHWQHYSDGMFKI 379

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           + +  +   L+             +                  +  
Sbjct: 380 EVEK-ELFGLKPMNCPGHCLMY-SHMPRTHNELPMRYADFGVLHRN 423


>gi|323477637|gb|ADX82875.1| prolyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 481

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 77/256 (30%), Gaps = 28/256 (10%)

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           +  E + + +     ++   E + I + +  +      +       R         ++ I
Sbjct: 159 TFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAGALHTYAFDTI 218

Query: 311 LGFPVMNEKQKPVVFGSVGGGG---RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +    + +       G         +           +  + G S      ++A+   + 
Sbjct: 219 MPDGKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISDRAIASVIAIHGDDH 278

Query: 368 STNNIKEMGPVLITTMDHDSDS-------LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  + P+ +  +   + +       +       +ML    I       + K  G +
Sbjct: 279 GPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIEICEMLNKNNITCVTDQDTEKTPGEK 338

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               + +  P+ +  G  E +   + IK                  R   +   T+   E
Sbjct: 339 FYIWEIKGVPIRLEIGPRELASSTVFIK------------------RRDNLKSYTVKKEE 380

Query: 481 LVSTVKKILQENKEEI 496
           +V+ VK++L E +E++
Sbjct: 381 VVNKVKEVLNEIQEDL 396



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 63/191 (32%), Gaps = 13/191 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         ++R  I+  IRN+ ++ G + +  PLL   D L +         + V
Sbjct: 32  PVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEV 91

Query: 71  FSLQDDDGQW-----ISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
           F      G       ++LR   T+ +A    EN     +     + Y+I  VFR E    
Sbjct: 92  F-WVTKGGSEDLDVKLALRP--TSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT 148

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILE 180
               +  +        +      +    + + +E      N+      ++ R   D    
Sbjct: 149 RPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAG 208

Query: 181 KIGLHGDDKLN 191
            +  +  D + 
Sbjct: 209 ALHTYAFDTIM 219


>gi|313673284|ref|YP_004051395.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940040|gb|ADR19232.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 640

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  M+   +     +   + L+  G R EM L  ++  G +++ A     P  I
Sbjct: 535 WLAPVQIKIMNISDEQADYCEQLYRRLKAEGFRVEMDL-RNEKIGYKIREAQLFKVPHMI 593

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E+ +  + ++ L  G+
Sbjct: 594 VIGNQEKEKNHVSVR-LRNGE 613



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 77/230 (33%), Gaps = 15/230 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K  ++R  I +  R  +   G+D + TP +  S+ L +     D  ++ ++S  D +
Sbjct: 264 WMPKGAKVRATIEEFWRREHFKNGYDLLYTPHIGKSN-LWQTSGHLDFYSENMYSPMDIE 322

Query: 78  GQWISLRYDLTA-PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
           GQ   ++       +  Y ++N      P R   +G V+R E+ G              +
Sbjct: 323 GQNYYIKPMNCPFHIMIYKSKNRSYRDLPLRWAELGTVYRYERSGVLH---------GLL 373

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
                T D    +   D +     +   + + I        I   I    +  + +  + 
Sbjct: 374 RVRGFTQDDAHIICAQDQIVEEIEEVLKFSLDIWKTFGFTSIKGYIATRPEKSVGDDSMW 433

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             A D L     + +K    E   D  G    G  +  +  D +     +
Sbjct: 434 KAATDSLM----ESIKKSGIEYEIDEGGGAFYGPKIDLKVKDAIGREWQM 479


>gi|117928726|ref|YP_873277.1| prolyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|152074742|sp|A0LV31|SYP_ACIC1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|117649189|gb|ABK53291.1| prolyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 583

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 2/110 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +       +     + +   L TAG+   +      + G +  
Sbjct: 474 DDAGLIWPRSVSPADVHVVIAGKG-EQEKLAEEFAAALDTAGLDVLLDDRVDASAGVKFA 532

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A+    P   + G    +RG+++++D   G+     + +  +      A
Sbjct: 533 DAELIGIPSIAVVG-RGAARGVVEVRDRGSGERRELALTDAVAELRTLAA 581



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +I + +R    + G   +  P L   +         +     +F L
Sbjct: 40  GIYSWLPLGYAVLRKIEEIVRQEMLHIGGQEVHFPALIPREIYEAS-GRWNEYGDTLFRL 98

Query: 74  QDDDGQWISLRY 85
           +D  G    L  
Sbjct: 99  KDRKGADYLLGP 110


>gi|294948976|ref|XP_002785990.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239900098|gb|EER17786.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 836

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/459 (8%), Positives = 110/459 (23%), Gaps = 40/459 (8%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             I N+++D IR  Y   GFD + TP + +S++L +           ++S+  +   W  
Sbjct: 376 AVIYNKLVDFIRREYRLRGFDEVITPNI-FSEALFQQSGHCGNYKDNMYSMNIEGETWY- 433

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           L+            +   +            V    +                  +    
Sbjct: 434 LKPMNCPGHCMIFDQKVRSYKELPIRMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFC 493

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
              ++   +   LE +    N +    +             +    +  + +      D 
Sbjct: 494 RPDQVQDEITHALEFLKFVYNTFGFDFS-------------VCLSTRPKKAIGSRAIWDT 540

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
            +      ++    +   +       G  +     D +  +        +     +    
Sbjct: 541 AENGLKNALEACGIDYDLNPGDGAFYGPKIDIRLRDALNRYHQ-CGTIQLDFNLPIRFNL 599

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                   E   +  +   +   ++                     A +       K   
Sbjct: 600 QYRTAETEESGDVHSVSEAANSPAD-----------DHQEKAGQNSAAVENVGSKAKADE 648

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
           +  G +  G          +   V             +  +              V++  
Sbjct: 649 ITLGELKHG--------FERPVMVHRAILGSIERCTAILTEHYGGKWPFWLSPRQVMVVP 700

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +       + Y    + L   G  A+  L S++    +++ A         + G  E++ 
Sbjct: 701 VSDKYSDYADYLR--KQLVRLGYEADADL-STRTMNKKVREAQVAAYNYIAVVGEKEQND 757

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             + ++                   +    +  +   +L
Sbjct: 758 LTVTLRKRDS--VRPLGTFGIAEMLDMFEKESEVNSDDL 794


>gi|294941858|ref|XP_002783275.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239895690|gb|EER15071.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 908

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 45/430 (10%), Positives = 111/430 (25%), Gaps = 38/430 (8%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             I N+++D IR  Y   GFD + TP + +S++L +           ++S+  +   W  
Sbjct: 377 AVIYNKLVDFIRREYRLRGFDEVITPNI-FSEALFQQSGHCGNYKDNMYSMNIEGETWF- 434

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           L+            +   +            V    +                  +    
Sbjct: 435 LKPMNCPGHCMIFDQKVRSYKELPIRMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFC 494

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
              ++   +   LE +    N +    +             +    +  + +      D 
Sbjct: 495 RPDQVQDEIVHALEFLKFVYNTFGFDFS-------------VCLSTRPKKAIGSRAIWDT 541

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                  G+K  L     D   +   GA    +    +   L+   +    +L   +   
Sbjct: 542 ----AESGLKNALEACGIDYDLNPGDGAFYGPKIDIRLRDALNRYHQCGTIQLDFNLPIR 597

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              +    E     +    S   ++ +          +        A +       K   
Sbjct: 598 FNLQYRIAETEESGDAHAASEAANSPV--------NDQQKGSTQSSAAVENVGSKAKADE 649

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
           +  G +  G          +   +             +  +              V++  
Sbjct: 650 ITLGELRHG--------FERPVMIHRAILGSIERCTAILTEHFGGKWPFWLSPRQVMVVP 701

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +       + Y    + L   G  A+  L S++    +++ A         + G  E++ 
Sbjct: 702 VSDKYSDYADYVR--KQLVRLGYEADADL-STRTMNKKVREAQVAAFNYIAVVGEKEQND 758

Query: 443 GMLQIKDLAK 452
             + ++    
Sbjct: 759 LTVTLRKRDT 768


>gi|228469293|ref|ZP_04054319.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228309192|gb|EEK17794.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 650

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 12/128 (9%), Positives = 37/128 (28%), Gaps = 3/128 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++                +  +              
Sbjct: 512 NQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLSPDQ--VVILPVSERFNDYAYEVA 569

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L    I   +    ++  G +++  + +  P  +I G  E++ G + ++   +G   +
Sbjct: 570 AALSEQDISVSVD-DRNEKVGRKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEGDAGT 628

Query: 458 REIKNNES 465
            +I     
Sbjct: 629 EKISTFAE 636



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 77/260 (29%), Gaps = 11/260 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  ++R ++ D ++ I + YG+  + TP +   +   K      +     F +
Sbjct: 265 GLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMTPHIGNVELY-KTSGHYAKYGADSFQV 323

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
                +G+   L+             + +       +YR  PV   E     R+ Q  + 
Sbjct: 324 ITTPQEGEAFMLKPMNCP-------HHCEIYKLKPHSYRDLPVRLAEFGTVYRYEQSGEL 376

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                     T D        D ++   +K  +    I      +    +I L      +
Sbjct: 377 H-GLTRVRGFTQDDAHIFCRPDQVKEEFLKVMEIIFIIFRALDFENFEAQISLRSQTDRS 435

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           + +      D+ ++  ++  +        +       G  L     D +     +   + 
Sbjct: 436 KYIGSEENWDRAEQAIIEACQEAGLPAHVEYDEAAFYGPKLDFMVKDALGRRWQLGTIQV 495

Query: 252 MHELYELVKGTIAGEKGFNE 271
            + L E  +    GE     
Sbjct: 496 DYNLPERFELEYTGEDNQKH 515


>gi|227821825|ref|YP_002825795.1| threonyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|254783532|sp|C3MB49|SYT_RHISN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227340824|gb|ACP25042.1| ThrS; threonyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 661

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 46/142 (32%), Gaps = 3/142 (2%)

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
            G    D    + +   +           L + L++             V++ T+  D+D
Sbjct: 506 FGAFYIDKDSEKRQPVMIHRAICGSMERFLGILLENYAGHMPLWISPLQVVVATITSDAD 565

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +       LR AG+  E     ++    +++       P+ ++ G  E     + I+
Sbjct: 566 DYGR--EVAARLREAGLTVETDF-RNEKINYKIREHSVTKVPVIVVCGKREAEERSVNIR 622

Query: 449 DLAKGKELSREIKNNESWREAR 470
            L    + +  ++   +   + 
Sbjct: 623 RLGSQAQTAMSLEEAVAALSSE 644


>gi|213161901|ref|ZP_03347611.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 530

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 185 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 244

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 245 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEK 303

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 304 IVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 363

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 364 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 422

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 423 TWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 481

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 482 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 520



 Score = 38.3 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 144 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 201

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 202 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 260

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 261 LMRVRGFTQDDAHIFCTEEQIRDEVNACI--------RMVYDMYSTFGFEKIVVKLSTRP 312

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           D ++    +  RA   L     +  
Sbjct: 313 DKRIGSDEMWDRAEADLAVALEENN 337


>gi|227830538|ref|YP_002832318.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579351|ref|YP_002837749.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229581889|ref|YP_002840288.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|284998034|ref|YP_003419801.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|259511622|sp|C3MQL0|SYP_SULIL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511624|sp|C3NGV6|SYP_SULIN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511625|sp|C3NET8|SYP_SULIY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|227456986|gb|ACP35673.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228010065|gb|ACP45827.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228012605|gb|ACP48366.1| prolyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|284445929|gb|ADB87431.1| prolyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 481

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 77/256 (30%), Gaps = 28/256 (10%)

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           +  E + + +     ++   E + I + +  +      +       R         ++ I
Sbjct: 159 TFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAGALHTYAFDTI 218

Query: 311 LGFPVMNEKQKPVVFGSVGGGG---RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +    + +       G         +           +  + G S      ++A+   + 
Sbjct: 219 MPDGKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISDRAIASVIAIHGDDH 278

Query: 368 STNNIKEMGPVLITTMDHDSDS-------LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  + P+ +  +   + +       +       +ML    I       + K  G +
Sbjct: 279 GPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSIEICEMLNKNNITCVTDQDTEKTPGEK 338

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               + +  P+ +  G  E +   + IK                  R   +   T+   E
Sbjct: 339 FYIWEIKGVPIRLEIGPRELASSTVFIK------------------RRDNLKSYTVKKEE 380

Query: 481 LVSTVKKILQENKEEI 496
           +V+ VK++L E +E++
Sbjct: 381 VVNKVKEVLNEIQEDL 396



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 63/191 (32%), Gaps = 13/191 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         ++R  I+  IRN+ ++ G + +  PLL   D L +         + V
Sbjct: 32  PVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLRRESTHIKGFEEEV 91

Query: 71  FSLQDDDGQW-----ISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
           F      G       ++LR   T+ +A    EN     +     + Y+I  VFR E    
Sbjct: 92  F-WVTKGGSEDLDVKLALRP--TSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT 148

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILE 180
               +  +        +      +    + + +E      N+      ++ R   D    
Sbjct: 149 RPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAG 208

Query: 181 KIGLHGDDKLN 191
            +  +  D + 
Sbjct: 209 ALHTYAFDTIM 219


>gi|262374878|ref|ZP_06068112.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309891|gb|EEY91020.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 640

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/355 (11%), Positives = 89/355 (25%), Gaps = 15/355 (4%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 264 FWHPNGWTIYQVLEQYMRKVQQDNGYEEIRTPQVVDFTLWEKSGHAANYADNMFTTHSEN 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 324 RNYAVKPMNCPCHVQVFNQGLKSY-RDLPVRLAEFGSCHRNEPSGSLHGIMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +   L +  +    E+   +        G ++L  ++E 
Sbjct: 379 TQDDAHIFCTKEQIGPEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDKLWDMAEK 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                 ++  ++       G  Y     +        +    +                 
Sbjct: 439 SLADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPERLDAS 495

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +      +          R I  L    +       + P+    M+         
Sbjct: 496 YVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLAPMQACVMNITDSQAEAC 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +     L+  GIRA   L  ++  G +++       P  ++ G  E   G + ++
Sbjct: 555 ESVVAKLKENGIRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVR 608



 Score = 43.7 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G++ I TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHPNGWTIYQVLEQYMRKVQQDNGYEEIRTPQVVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+   ++ +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 ADNMFTTHSEN-RNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAEFGSCHRNEPSGSLH 370


>gi|258578341|ref|XP_002543352.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237903618|gb|EEP78019.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 653

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 50/448 (11%), Positives = 111/448 (24%), Gaps = 67/448 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N++L  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 204 GSPLFQPNGTHILNKLLAFLRAQYRQYGFQEVLTPTI-YKKSLWELSGHWQNYKDDMYEV 262

Query: 74  QDDD------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
           +                +   L+          + ++ +     P R     P+ RNE  
Sbjct: 263 RGRGATGETTHGEIGEDESYGLKPMNCPGHCLLFKSQKWSYRDLPVRYADFSPLHRNEVS 322

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
           G                   +                + +K  D  +          +L 
Sbjct: 323 GSL------SGLTRVRRFHQDDGHIFCRPQQIGREIQLALKFTDTVMKTFGLGEYKLVLS 376

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                      + +  L   D  +K     ++        +       G  +        
Sbjct: 377 T------RPEKDFIGSLELWDAAEKQLKDALEKSGRNWEINEGDGAFYGPKI-------- 422

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
             F   D +   H+L  +       ++   E +V  E       +++       I R + 
Sbjct: 423 -DFQLQDSDGKFHQLSTIQLDMNLPQRFGLEYMVP-EGEEDYNASTDGKGTPVLIHRAIF 480

Query: 301 YYTGCVYEAILGFPVMNEKQKP-VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
                 +  ++                 +    + D ++           G+        
Sbjct: 481 GSLERFFALLIEHYNGRWPFWLSPRQAIILTVNQDDDVLKAADEAAAKMCGYQRIPFHEA 540

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L++     + ++    V +             +   + +R A I              
Sbjct: 541 NELEAPSQPLSPLQPSFHVTVD---------KSARSLAKKIREAQI-------------- 577

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQI 447
            +KY       L  + G    + G + +
Sbjct: 578 -MKY------NLIFVIGPKNLADGSVDV 598


>gi|225630645|ref|YP_002727436.1| threonyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254783546|sp|C0R403|SYT_WOLWR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225592626|gb|ACN95645.1| threonyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 633

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/293 (11%), Positives = 82/293 (27%), Gaps = 7/293 (2%)

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I         D                   L G+ + +     D++  F     + SE I
Sbjct: 338 IFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGL-MRVRGFTQDDAHIFCMEEQVNSETI 396

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
                   +  E   +E+            G +E+   +E           +    +   
Sbjct: 397 KFCDLLKEVYSELGFNEISVKFSDRPDVRAGDDEVWDRAEKALLEAVKEAGLSYELSPGE 456

Query: 298 GLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           G  Y     +   +AI         Q   +     G         +     +        
Sbjct: 457 GAFYGPKLEFVLKDAIGRSWQCGTLQVDFILPERLGAFYIGADGHKHHPVMLHRAILGTF 516

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              + + +++             + I T+ +++D        + +L+  G+R +  L + 
Sbjct: 517 ERFIGILIENYAGKFPVWLAPTQLAILTITNEAD--GYATKISNVLKEQGVRVKTDLTNE 574

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           K    +++       P+  I G  E +   + +++L   ++ S  ++      
Sbjct: 575 K-ISYKIRLHSLNKVPILWIVGKNEVTSKTVSVRNLGSERQESFSLEKAIELL 626



 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/254 (10%), Positives = 67/254 (26%), Gaps = 13/254 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N +   IR    N G+  ++TP+L   +   K     D+  + +F + + +
Sbjct: 263 WHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWEKS-GHWDKFRENMFIVDESE 321

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++        +    +  +                 +                  
Sbjct: 322 SKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDD 381

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +     + ++        + +    ++                +I +   D+ + R    
Sbjct: 382 AHIFCMEEQVNSETIKFCDLLKEVYSELG------------FNEISVKFSDRPDVRAGDD 429

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ +K  L+ VK                G  L     D +         +    L E
Sbjct: 430 EVWDRAEKALLEAVKEAGLSYELSPGEGAFYGPKLEFVLKDAIGRSWQCGTLQVDFILPE 489

Query: 258 LVKGTIAGEKGFNE 271
            +     G  G   
Sbjct: 490 RLGAFYIGADGHKH 503


>gi|194467742|ref|ZP_03073728.1| prolyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194452595|gb|EDX41493.1| prolyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 577

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 20/128 (15%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             ++I      +I       D ++      Q L  AG    +     +  G +   +D  
Sbjct: 467 WPDSIAPFDVHVIPVNAKKEDQMAMADKIDQQLTEAGYEVLVDDRKERA-GVKFADSDLI 525

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P+ +  G      G+++IK    G+                   + +   ELV+TV+ 
Sbjct: 526 GIPIRVTVGKK-AQDGIVEIKIRKTGE------------------TVEVKQEELVNTVEI 566

Query: 488 ILQENKEE 495
           +L++  EE
Sbjct: 567 LLKQLNEE 574



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+  ++ + IR+  +  G   +  P L  +D L K     +     +F L+D  
Sbjct: 42  YLPLAYRVIRKVENIIRDEMDKAGAVEMLMPGLLPAD-LWKESGRYESYGDNLFKLKDRR 100

Query: 78  GQWISLRY 85
            +   L  
Sbjct: 101 DRDFILGP 108


>gi|91215264|ref|ZP_01252236.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186869|gb|EAS73240.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 648

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 36/111 (32%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + ++    +           I ++    ++ SK     
Sbjct: 509 NEMHRPVMIHRAPFGSLERFIAILIEHTGGNFPLWLMPEQATILSISEKYENYSK--KVL 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +L+   IRA       +  G +++ A+    P  +I G  E     + ++
Sbjct: 567 SLLKKHEIRATFD-NRGETMGKKIREAEMNKTPYMLIVGESEVENETVSVR 616



 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 11/82 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS------LGKFLPDEDRPN 67
           G      K   +R+R+   +++  EN G+ P+ +P +   +         K+  D  +P 
Sbjct: 262 GLPLWLPKGAALRDRLEKFLKDAQENAGYQPVVSPHIGQKELYMTSGHFQKYGEDSFQPI 321

Query: 68  KGVFSLQDDDGQWISLRYDLTA 89
           K        DG+   L+     
Sbjct: 322 K-----TPQDGEEYLLKPMNCP 338


>gi|86138530|ref|ZP_01057103.1| prolyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824590|gb|EAQ44792.1| prolyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 451

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  ++   +    +  G  P+  P ++ +D L +     D  
Sbjct: 31  MIKQSSAGIYSWLPLGFKVLKKLEGIVHEEQQRAGHMPMLMPTIQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            + +  ++D  G+ +       +L   + R    ++  +       +  
Sbjct: 90  GQEMLRVEDRHGRDMLFTPTAEELITDIFRAHVSSYKDLPLTMYQIQWK 138


>gi|323464340|gb|ADX76493.1| glycyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 464

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/229 (6%), Positives = 48/229 (20%), Gaps = 4/229 (1%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                +       E +       +  +                   +            +
Sbjct: 239 WQNYWKDFAANWLESLGLAKENTRLRDHDEDELSHYSN-ATTDIEYRFPFGWGELWGIAS 297

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              ++         E        +      Y    S    +   A          +   K
Sbjct: 298 RTDFDLKKHSEHSGEDFSYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGNK 357

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
              +  +    + P     +       +      + L +     +     S++ G + + 
Sbjct: 358 DARTVLHFHPAIAPYKAAVLPLSKKLSADAIKVYEQL-SEDFVVDFD--ESQSIGKRYRR 414

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            D    P  I           + ++D    +++   I    ++   +V 
Sbjct: 415 QDEIGTPYCITFDFDSLEDQQVTVRDRDTMEQVRMPISELNAFLAEKVK 463


>gi|229168558|ref|ZP_04296281.1| Prolyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614964|gb|EEK72066.1| Prolyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 566

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ S+ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQASE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKSVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|289163681|ref|YP_003453819.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150]
 gi|288856854|emb|CBJ10665.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150]
          Length = 639

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 83/264 (31%), Gaps = 12/264 (4%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           + +E     R        GL  V+ ++     D++  F     + SE   ++    S+  
Sbjct: 353 RFSEFGNCHRCEPSGSLHGLMRVRNMVQ----DDAHIFCTEDQIQSEVAMMLELVQSVYT 408

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +   +E+   +        G +E+   +E   K       I+       G  Y      E
Sbjct: 409 DFGFNEIKYRLALRPEKRVGSDEVWDKAEAALKQAMKERNIEWVDAPGEGAFYG--PKIE 466

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKS 364
             L   +    Q   +       GR D +     G                 R +  L  
Sbjct: 467 CSLSDCLGRIWQCGTIQVDFSMPGRLDAIYIAEDGSKQTPVMLHRAILGSFERFMGILIE 526

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +    +  + PV    M          +  TQ+L+  GIRA   L  ++  G +++  
Sbjct: 527 HYAGKLPLW-LSPVQAIIMTISEKQSEYAEKVTQILQKNGIRANFDL-RNEKIGFKIREH 584

Query: 425 DRRNCPLAIIQGTGERSRGMLQIK 448
             +  P  ++ G  E   G + ++
Sbjct: 585 TLQKIPYLLVIGDKEVESGQVAVR 608



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/152 (10%), Positives = 44/152 (28%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R+   ++G+  I TP L     L +           +F  
Sbjct: 261 GMVFWHPKGWTIYQELERYMRHRLADFGYQEIRTPQLVDR-VLWEKSGHWANFRDEMFVT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + ++ +  +++        +   +   +       +         +            ++
Sbjct: 320 ETEN-RHYAVKPMNCPCHVQVFNQGLKSYRDLPLRFSEFGNCHRCEPSGSLHGLMRVRNM 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +     + ++   +A  LE V     D+
Sbjct: 379 VQDDAHIFCTEDQIQSEVAMMLELVQSVYTDF 410


>gi|328553230|gb|AEB23722.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
          Length = 638

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 71/257 (27%), Gaps = 15/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IRN +   +R+  + Y +  + TP++     L +     D   + ++  
Sbjct: 263 GMPFYLPNGQFIRNTLESFLRSKQDAYHYQEVRTPMMMN-QRLWEQSGHWDHYKENMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D Q  +L+             +        R+YR  P+   E     R       + 
Sbjct: 321 SEADQQRFALKPMNCPG-------HMLIFKERLRSYRELPIRMAEFGQVHRHEFSGALNG 373

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                S    DA + +        +              ++         +    +  + 
Sbjct: 374 LLRVRSFCQDDAHIFVTPDQIESEI------ASALQLIHEVYTAFGFSYDIELSTRPEDY 427

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   R  D+ +    + +K    + R +       G  +     D +         +   
Sbjct: 428 MGSERLWDRAESALERVLKEQGYDFRFNRGDGAFYGPKIDIHIKDALNRSHQCATVQLDF 487

Query: 254 ELYELVKGTIAGEKGFN 270
           ++ E    T   EK   
Sbjct: 488 QMPEKFDLTYIDEKNQK 504



 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 39/358 (10%), Positives = 88/358 (24%), Gaps = 16/358 (4%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           +   N   I     ++                    Q   +  G      +         
Sbjct: 266 FYLPNGQFIRNTLESFLRSKQDAYHYQEVRTPMMMNQRLWEQSGHWDHYKENMYFSEADQ 325

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
              A+       H+          I ++      +         +         L G+ L
Sbjct: 326 QRFALKPMNCPGHML---------IFKERLRSYRELPIRMAEFGQVHRHEFSGALNGL-L 375

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV---KGTIAGEKGFN 270
            +     D++  F     + SE    +     +          EL    +  +  E+ ++
Sbjct: 376 RVRSFCQDDAHIFVTPDQIESEIASALQLIHEVYTAFGFSYDIELSTRPEDYMGSERLWD 435

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
                 E V K      R         G +       +A+         Q          
Sbjct: 436 RAESALERVLKEQGYDFRFNRGDGAFYGPKIDIHIK-DALNRSHQCATVQLDFQMPEKFD 494

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
               D    + +   +    F      L +  +    +           I  +  ++   
Sbjct: 495 LTYIDEKNQKVRPVVIHRAVFGSLDRFLGIITEHYGGAFPLWLAPVQAKIIPVS-NTVHR 553

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +   + ++ AGIRAE+     +  G +++ A  +  P   + G  E     + ++
Sbjct: 554 DCAEQVHRQMKKAGIRAELD-QRDEKLGYKIREAQIKKIPYIAVVGDQECRHHTVHVR 610


>gi|167589833|ref|ZP_02382221.1| prolyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 382

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 49/155 (31%), Gaps = 13/155 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G     +  +R +  +   +R+  +  GF  ++  LL+ +D L +     D     +  L
Sbjct: 38  GLYSWMSLGLRAQRCVERVVRDEMDRAGFCEVQMSLLQDAD-LWRQSGRLDIYGDELMRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP------GR 124
            +  G+   L     +L A + R    +++        Y+ G  +R+E            
Sbjct: 97  TNRAGRLFCLGATCEELAANMVR---THYNRTDLSLGLYQFGNKYRDELRTRGGLVRARE 153

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           F              A  A   +          +G
Sbjct: 154 FIMKDAYAFHATDDGARAAYETVRDAYRRIFGRLG 188


>gi|148377610|ref|YP_001256486.1| threonyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291656|emb|CAL59042.1| Threonyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 582

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/142 (9%), Positives = 44/142 (30%), Gaps = 2/142 (1%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D      +   +           + + L+  + +         V I  ++ + + L+  
Sbjct: 443 IDKNNKEVRPIMIHRGLIGTYERFVAILLEQTKGNLPFWIAPKQVTIIPVNLEEN-LAYV 501

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + L     R ++   S +    +++ A        +I G+ E +   +  ++  K 
Sbjct: 502 KKVAKKLLNNDFRVKID-DSDERLNKKIRNAQVSKSKFQLILGSNEMNSNTISYREYGKE 560

Query: 454 KELSREIKNNESWREARVAQIT 475
           +  +  I +     +       
Sbjct: 561 ETTTVSINDFIKLLKKLRNNYE 582



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + I N I + +  + + YGF  + TP    ++ L K           +F  
Sbjct: 202 GFPIWLENGMYIHNEIRNLVLKLDKKYGFTEVLTPHF-GAELLYKTSGHLAHYKDDMFKP 260

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              + + +  R  +T P       +         +YR  P+  +E+    R+ +
Sbjct: 261 LLVENETLIPRP-MTCP------HHIIVYNTEKHSYRDLPIRYSEQSQLYRYEK 307


>gi|270158051|ref|ZP_06186708.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|269990076|gb|EEZ96330.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968]
          Length = 639

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 91/290 (31%), Gaps = 15/290 (5%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           + +E     R        GL  V+ ++     D++  F     + SE   ++    S+  
Sbjct: 353 RFSEFGNCHRCEPSGSLHGLMRVRNMVQ----DDAHIFCTEDQIQSEVAMMLELVQSVYT 408

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +   +E+   +        G +E+   +E   K       I+       G  Y      E
Sbjct: 409 DFGFNEIKYRLALRPEKRVGSDEVWDKAEAALKQAMKERNIEWVDAPGEGAFYG--PKIE 466

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKS 364
             L   +    Q   +       GR D +     G                 R +  L  
Sbjct: 467 CSLSDCLGRIWQCGTIQVDFSMPGRLDAIYIAEDGSKQTPVMLHRAILGSFERFMGILIE 526

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +    +  + PV    M          +  TQ+L+  GIRA   L  ++  G +++  
Sbjct: 527 HYAGKLPLW-LSPVQAIIMTISEKQSEYAEKVTQILQKNGIRANFDL-RNEKIGFKIREH 584

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             +  P  ++ G  E   G + ++     +     +   ++  +  + +I
Sbjct: 585 TLQKIPYLLVIGDKEVESGQVAVR---TREGTDLGLMTIDTICDTLMQEI 631



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/152 (10%), Positives = 44/152 (28%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R+   ++G+  I TP L     L +           +F  
Sbjct: 261 GMVFWHPKGWTIYQELERYMRHRLADFGYQEIRTPQLVDR-VLWEKSGHWANFRDEMFVT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + ++ +  +++        +   +   +       +         +            ++
Sbjct: 320 ETEN-RHYAVKPMNCPCHVQVFNQGLKSYRDLPLRFSEFGNCHRCEPSGSLHGLMRVRNM 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +     + ++   +A  LE V     D+
Sbjct: 379 VQDDAHIFCTEDQIQSEVAMMLELVQSVYTDF 410


>gi|294789007|ref|ZP_06754247.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483109|gb|EFG30796.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 638

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/392 (10%), Positives = 107/392 (27%), Gaps = 27/392 (6%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  +++       +     +++        V        +       D +     +
Sbjct: 267 HPRGWALWQVIEQHMRHELTAAGYQEVKT---PQVMDKTFWEKSGHWANYKDNMFLTSSE 323

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY +   N      I         D                   L G+ + +     D
Sbjct: 324 KRDYAVKPMNCPGHVQIFNHALRSYRDLPMRLAEFGSCHRNEPSGALHGL-MRVRGFVQD 382

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     +  E     +  + I  +     +   +        G +E+   +E   +
Sbjct: 383 DAHIFCTEDQIAEETRKFNLLVMKIYQQFGFENVSIKLSLRPEKRAGSDEIWDKAEQGLR 442

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
               +  ++       G  Y     Y  I      + +   +    V         V+  
Sbjct: 443 DALTACGVEWEELPGEGAFYGPKVEYH-IKDALGRSWQCGTIQLDFVLPERLDAEYVTED 501

Query: 342 KGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +  P       +G     + +   E + +    + PV +  M+      +        
Sbjct: 502 NNKARPVMLHRAILGSLERFIGILIEEHAGSFPLWLAPVQMVVMNISEGQAAYAAEVQAK 561

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L+ AG R ++    ++  G +++       P  +  G  E + G + I+           
Sbjct: 562 LQAAGFRVDLD-TRNEKIGYKIRDNSTMRYPYQLTVGDKEMANGQVSIR----------- 609

Query: 460 IKNNESWREARVAQITIPISELVSTVKKILQE 491
                   +      ++ ++EL+  +KK + E
Sbjct: 610 --------KKAENLGSVSVNELIEMLKKEIAE 633



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   I   +R+     G+  ++TP +    +  +           +F L
Sbjct: 262 GMVFWHPRGWALWQVIEQHMRHELTAAGYQEVKTPQVMDK-TFWEKSGHWANYKDNMF-L 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 320 TSSEKRDYAVKPMNCPGHVQIFNHALRSYRDLPMRLAEFGSCHRNEPSGALH 371


>gi|126663528|ref|ZP_01734525.1| threonine--tRNA ligase (threonine tRNA synthetase) [Flavobacteria
           bacterium BAL38]
 gi|126624476|gb|EAZ95167.1| threonine--tRNA ligase (threonine tRNA synthetase) [Flavobacteria
           bacterium BAL38]
          Length = 633

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 5/114 (4%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D  + R    +    G    + R I  L    +    I  M    I  +       +  +
Sbjct: 493 DDKLHRPVMIHRAPFGS---MERFIAILLEHTAGNFPIWLMPEQAI-ILSLSEKYENYAK 548

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +L    IRA +    ++  G +++ A+    P  +I G  E   G + ++
Sbjct: 549 KVLDLLENHEIRALID-NRNETIGKKIREAEMNKYPFMLIVGEEEEKNGTISVR 601



 Score = 40.2 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 18/47 (38%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R+R+   ++   +  G++ + TP +   D      
Sbjct: 247 GLPLWLPKGAALRDRLEQFLKKAQKKAGYEQVVTPHIGMKDLYVTSG 293


>gi|121700783|ref|XP_001268656.1| threonyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119396799|gb|EAW07230.1| threonyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 532

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 55/474 (11%), Positives = 124/474 (26%), Gaps = 72/474 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          + NR++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 86  GSPLFLPNGTHVINRLISFLRTQYLQYGFREVLTPTI-YKRSLWEVSGHWQNYKDDMYEV 144

Query: 74  QDDD-----------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +               +   L+          + ++N      P R     P+ RNE  G
Sbjct: 145 RGRGATGEADGEAGEDESYGLKPMNCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEVSG 204

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
                      V                +  +   A+G    D  +          +L  
Sbjct: 205 SLSGLTR----VRRFHQDDGHIFCRPQQIKGEIASALGFV--DMVMTTFGLGPYRLVLST 258

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                     + +  L   D  +    + +     E   +       G  +  +  D   
Sbjct: 259 ------RPEKDFIGSLELWDSAEAQLREALDNSGREWAMNEGDGAFYGPKIDIQLQDQAG 312

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +  +   +    L +              L        +    +   + +  +V    +
Sbjct: 313 KYHQLSTIQLDMNLPQRFG-----------LEYQVAEGEEDYDPATPGRATPVLVHRANF 361

Query: 302 YTGCVYEAILGFPVMNE--KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
            +   + A+L                G +    + + ++++        +GF   ++   
Sbjct: 362 GSLERFLALLIEQYGGRWPFWLSPRQGIILTVNQDEAVLTQAHEAAAQLSGFRPLVAGQN 421

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            A      +   +  +    +  +D  S +L K                           
Sbjct: 422 DA-----KTPRPLSSVDSTFLIDVDTSSQTLGKKIQRA---------------------K 455

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           Q+KY       L  I G  + +   + + D   G+  ++   +    +E    Q
Sbjct: 456 QMKY------NLIFILGPKDVADSSITV-D-VTGQLQTKTDADGRKLQEVMEQQ 501


>gi|62078861|ref|NP_001014086.1| probable prolyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|73919763|sp|Q5M7W7|SYPM_RAT RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags:
           Precursor
 gi|56789529|gb|AAH88403.1| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Rattus
           norvegicus]
 gi|149035787|gb|EDL90468.1| rCG50302 [Rattus norvegicus]
          Length = 475

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 56/193 (29%), Gaps = 15/193 (7%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   I  P L  ++ L +     D   + +  L+D  
Sbjct: 90  LMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAE-LWRATGRWDLMGRELLRLKDRH 148

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 149 GKEYCLGPTHEEAVTALVA---SQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFY 205

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D+   +A+   + +C       + +G++       + +         ++ +  
Sbjct: 206 MKDMYTFDSSSEAAQETYSLVCDAYCRLFDRLGLRWMKARADVGSIGGTMSHEFQLPVDI 265

Query: 187 DDKLNERLIVLRA 199
            +           
Sbjct: 266 GEDRLVVCPSCHF 278


>gi|15802131|ref|NP_288153.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15831680|ref|NP_310453.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168762217|ref|ZP_02787224.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168788115|ref|ZP_02813122.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168800100|ref|ZP_02825107.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|187776029|ref|ZP_02799987.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188024843|ref|ZP_02774486.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|189010441|ref|ZP_02807141.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189402338|ref|ZP_02781727.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189403439|ref|ZP_02795487.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|208810744|ref|ZP_03252620.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816647|ref|ZP_03257767.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|209400429|ref|YP_002270789.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217328990|ref|ZP_03445071.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254793336|ref|YP_003078173.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|291282899|ref|YP_003499717.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|22654116|sp|Q8XE27|SYT_ECO57 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238065112|sp|B5YQ07|SYT_ECO5E RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|12515733|gb|AAG56706.1|AE005395_2 threonine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13361893|dbj|BAB35849.1| threonine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187769425|gb|EDU33269.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188016225|gb|EDU54347.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|189000290|gb|EDU69276.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189356196|gb|EDU74615.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189360618|gb|EDU79037.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189367509|gb|EDU85925.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189372060|gb|EDU90476.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189377572|gb|EDU95988.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208725260|gb|EDZ74967.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208730990|gb|EDZ79679.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|209161829|gb|ACI39262.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209768828|gb|ACI82726.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768830|gb|ACI82727.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768832|gb|ACI82728.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768834|gb|ACI82729.1| threonine tRNA synthetase [Escherichia coli]
 gi|209768836|gb|ACI82730.1| threonine tRNA synthetase [Escherichia coli]
 gi|217318337|gb|EEC26764.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254592736|gb|ACT72097.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290762772|gb|ADD56733.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320188406|gb|EFW63068.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320652208|gb|EFX20506.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320657809|gb|EFX25571.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320658384|gb|EFX26078.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|326342086|gb|EGD65867.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343638|gb|EGD67400.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 642

 Score = 53.3 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKIAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|296117435|ref|ZP_06836023.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295976037|gb|EFG82827.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 642

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/249 (10%), Positives = 69/249 (27%), Gaps = 8/249 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E    +    ++  +                  G ++    SE   
Sbjct: 384 DDAHIFCTEEQIADETARFVRMLSAVYQDLGFEHFRVKFADRPEQRAGSDDTWDRSENAL 443

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           K   +   ++       G  Y      E +L   +  + Q   +        R D     
Sbjct: 444 KEACHMAGVEYEHNPGEGAFYG--PKLEFVLRDAIGRDWQCGTLQVDYVMPERLDATYVG 501

Query: 341 FKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
                               R +  L    +    +  + PV +      +D+    +  
Sbjct: 502 EDSARHRPVMLHRAILGSFERFLGILIEQHAGRFPMW-LAPVQVVVASIVTDAEPYAREV 560

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + L+ AG+  E  +  ++    +++       P+ ++ G  E     + ++ L    + 
Sbjct: 561 VEKLQAAGVVVEADV-RNEKINAKIREHSLARVPVILVVGRKEAEERTVALRRLGGKAQE 619

Query: 457 SREIKNNES 465
              +    +
Sbjct: 620 IVPLDEAVT 628



 Score = 40.6 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 28/257 (10%), Positives = 68/257 (26%), Gaps = 18/257 (7%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF--SLQD 75
              K  R+ + + D +R      G+  + TP L     L +     D+  + +F  +++D
Sbjct: 266 WHPKGWRLYSVLQDYMRRAQTRNGYQEVRTPQLVDRG-LWEASGHWDKYRQHMFIATVED 324

Query: 76  DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP-VFRNEKHGPGRFRQFIQCDVD 134
           +D + ++L+        +    +                     +               
Sbjct: 325 ED-KTLALKPMNCPCHVQIF-RHGLRSYRELPLRMAEFGACHRYEPSGALHGIMRVRGFT 382

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
              +     + ++    A  +  +     D               E   +   D+  +R 
Sbjct: 383 QDDAHIFCTEEQIADETARFVRMLSAVYQDLG------------FEHFRVKFADRPEQRA 430

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                 D+ +    +   +   E   +       G  L     D +         +  + 
Sbjct: 431 GSDDTWDRSENALKEACHMAGVEYEHNPGEGAFYGPKLEFVLRDAIGRDWQCGTLQVDYV 490

Query: 255 LYELVKGTIAGEKGFNE 271
           + E +  T  GE     
Sbjct: 491 MPERLDATYVGEDSARH 507


>gi|255066457|ref|ZP_05318312.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049337|gb|EET44801.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 322

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 220 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 278

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 279 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIA-DALVNH 322


>gi|146340273|ref|YP_001205321.1| putative threonine tRNA synthetase (fragment) [Bradyrhizobium sp.
           ORS278]
 gi|146193079|emb|CAL77090.1| putative threonine tRNA synthetase (fragment) [Bradyrhizobium sp.
           ORS278]
          Length = 409

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/141 (9%), Positives = 39/141 (27%), Gaps = 2/141 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   + + IR      G+  + TP L   D   +     ++    +F+L
Sbjct: 24  GMVFWHPRGHALYRVLENFIRGKMRRLGYAEVRTPQLLPLDLWMQS-GHWEKFGAQMFAL 82

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +  + ++L+        +    N  +       Y        ++              
Sbjct: 83  G-EGERAMALKPMSCPCHVQIFNRNLRSWRELPLRYAEFGSCHRDEPSGALHGLMRTRGF 141

Query: 134 DNVGSSAETADAEMCMMMADT 154
           +   +       ++   +A  
Sbjct: 142 EQDDAHVFCRADDVAGEVARF 162



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 35/93 (37%), Gaps = 3/93 (3%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
             + + L+    +         V +  +  D   L       ++L +A +RA +     +
Sbjct: 282 RFIAMLLEHHAGALPFWLSPDQVAVVPITRD--QLDDALKLRELLFSAELRAVLSAD-GE 338

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               ++  A   + P+  + G  E ++G + ++
Sbjct: 339 TLSRRIVAAHAASIPVVAVVGAREAAQGTVSLR 371


>gi|319795456|ref|YP_004157096.1| prolyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597919|gb|ADU38985.1| prolyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 581

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/109 (8%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P+++ ++   +     ++ 
Sbjct: 31  MIKKLGTGIYTYMPMGLRVIRKVEAIVREEMNRAGAIELTMPVVQPAE-FWQETGRFEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   +   ++    ++   +AR    ++  +       +  
Sbjct: 90  GPELLRIKDRHDRDFVIQPTSEEVVTDIARQEIRSYKQLPKNFYQIQTK 138


>gi|302335688|ref|YP_003800895.1| prolyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319528|gb|ADK68015.1| prolyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 571

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 2/110 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                S         V +  +D   D +    +     L  AG+   +     +  G + 
Sbjct: 458 DEHGISWPVSVAPYEVEVIPLDVRDDLVWPVAERLATGLVDAGVEVVVDDRKER-PGVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             AD    P  ++ G      G +++K  A G+ L   I         RV
Sbjct: 517 NDADLMGFPFQVVCGKKAIRDGNVELKLRATGERLELPIAEAVRAVAERV 566



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +I   IR+  E  G   ++ P+L  +D L       +     +  +
Sbjct: 42  GLYSYLPLAWRSIRKIEAIIRDEMETIGAQEMQVPILTDAD-LWHQSGRWEVYGPELMRI 100

Query: 74  QDDDGQWISLRY 85
            D  G   +L  
Sbjct: 101 DDRHGHSYALGP 112


>gi|290980243|ref|XP_002672842.1| predicted protein [Naegleria gruberi]
 gi|284086421|gb|EFC40098.1| predicted protein [Naegleria gruberi]
          Length = 720

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/366 (10%), Positives = 100/366 (27%), Gaps = 24/366 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ N++++ IR  Y   G+D + TP +   + L +           +F++
Sbjct: 333 GTPFFLPHGTRLFNKLVEFIRKEYRKRGYDEVITPQMFQKE-LWETSGHWQHYKDDMFTV 391

Query: 74  QD---DDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG-------- 121
            +      + I ++                +    P R     P+ RNE  G        
Sbjct: 392 IEGTQHKEETIGIKPMNCPAHCLMFDSKIRSYRELPVRLADFSPLHRNEPRGSLTGLTRV 451

Query: 122 -PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                         +   S      +    +   +    ++ N           ++ + +
Sbjct: 452 RRFHQDDSHIFCTHDQVKSEIENCLQFVKFVYSEIFGFNLRFNLSTRPEKFVGDIE-MWD 510

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE-QIDI 239
           K      + L+     L   D         +++       D+   F + A +  + Q+  
Sbjct: 511 KAEQSLKECLDGYNWKLNEGDGAFYGPKIDIQIE------DSLQRFHQCATIQLDFQLPR 564

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
             +         +     + +  +   + F  L+   E +          +         
Sbjct: 565 RFNLKYQSQNDQLITPVIIHRAILGSIERFIALLT--EHLSGRWPFWLNPRQCFICPVSA 622

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           E  +   Y   +   +    ++  VF +            + K ++     ++  +    
Sbjct: 623 ENASLVDYCKEVKDQIFKTAEERGVFSNYFIDVDLSDKTMKKKIRDAQVLQYNFILVLGE 682

Query: 360 VALKSL 365
             ++  
Sbjct: 683 KEMQEK 688



 Score = 40.2 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/112 (10%), Positives = 30/112 (26%), Gaps = 12/112 (10%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY--------QMYTQ 398
                      + +  + L              I  +  ++ SL  Y            +
Sbjct: 584 HRAILGSIERFIALLTEHLSGRWPFWLNPRQCFICPVSAENASLVDYCKEVKDQIFKTAE 643

Query: 399 MLRT--AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             R   +    ++ L S K    +++ A        ++ G  E     + ++
Sbjct: 644 E-RGVFSNYFIDVDL-SDKTMKKKIRDAQVLQYNFILVLGEKEMQEKTVSVR 693


>gi|224062355|ref|XP_002195014.1| PREDICTED: similar to probable threonyl-tRNA synthetase 2,
           cytoplasmic [Taeniopygia guttata]
          Length = 719

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 47/149 (31%), Gaps = 1/149 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G     K + V      +G    ++A+ +          + P  +  +     S   
Sbjct: 570 TYVGKDGDDKKRPVIIHRAILGSVERMIAILAENYGGKWPFWLSPRQVMVVPVGPASEQY 629

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q        AG  +++ L  S     +++ A        ++ G  E++   + ++    
Sbjct: 630 AQQVCDQFFEAGFMSDVDLDQSCTLNKKIRNAQLAQYNFILVVGEKEKANNAVNVRTRDN 689

Query: 453 GKELSREI-KNNESWREARVAQITIPISE 480
                  +    E  ++ + +QI     E
Sbjct: 690 KVHGEISVSSTIEKLKKFKTSQIANAEEE 718



 Score = 41.7 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N ++D IR  Y    F  + +P + ++  L +        ++ +FS + + 
Sbjct: 341 FLPRGAFLYNTLVDFIRGEYRRRNFTEVVSPNV-FNSKLWEASGHWQHYSENMFSFEVEK 399

Query: 78  GQWISLRYDLTAPLARYVAEN 98
            +  +++           A  
Sbjct: 400 -ETFAIKPMNCPGHCLMFAHR 419


>gi|50086067|ref|YP_047577.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|73919764|sp|Q6F860|SYT_ACIAD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49532043|emb|CAG69755.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 640

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/364 (12%), Positives = 91/364 (25%), Gaps = 20/364 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 264 FWHANGWTIYQALEQYMRKVQQDNGYQEVRTPQIVDFTLWEKSGHAANYAENMFTTHSES 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 324 RNYAVKPMNCPCHVQVFNQGLKSY-RDLPVRLAEFGSCHRNEPSGSLHGIMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D+   F     +  E  D +   L +  +    ++   +        G + L  ++E 
Sbjct: 379 TQDDGHIFCTKEQIGKEVADFIQLTLDVYKDFGFEDVQMKLSTRPEKRVGDDRLWDLAEK 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG--GRYDG 336
                 ++  ++       G  Y     +        +    +                 
Sbjct: 439 SLADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPIRLDAS 495

Query: 337 LVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            V+    ++ P            R I  L    +       + PV    M+         
Sbjct: 496 FVTEDNERDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLAPVQACVMNITDSQAEAC 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----K 448
           Q     L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K
Sbjct: 555 QQVVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613

Query: 449 DLAK 452
           +L  
Sbjct: 614 NLGT 617



 Score = 41.7 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  + TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHANGWTIYQALEQYMRKVQQDNGYQEVRTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 AENMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAEFGSCHRNEPSGSLH 370


>gi|170695920|ref|ZP_02887060.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170139218|gb|EDT07406.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 635

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +  ++   +R    + G+  I+TP++    SL +        
Sbjct: 255 MQDESP-GMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +    +               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-NHGLRSYRDLPLRYAEFGSCHRNESSGALH 370



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/349 (10%), Positives = 90/349 (25%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPRGWTLWQQVEQYMRRRVNDAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY I   N      +         D                   L G+ + +     D
Sbjct: 323 KRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F       SE I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEDQFISESIAFNTLAMSVYSDFGFDHVEIKLSLRPDARAGTDETWDRAEQGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
               +  +        G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 EALTACGVTWEELPGEGAFYGPKVEYHIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +       + P+ +  M+         Q   Q 
Sbjct: 502 SRRRPIMLHRAIVGSMERFLGILIEHHAGAMP-AWLAPMQVVVMNIAESQAEYAQSLAQS 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R E  L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGVRVEADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|298206753|ref|YP_003714932.1| threonyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849384|gb|EAP87252.1| threonyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 648

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 39/108 (36%), Gaps = 3/108 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + + L+    +          +I ++    ++ SK      +L
Sbjct: 512 HRPVMIHRAPFGSMERFVAILLEHTAGNFPLWLMPEQAIILSLSEKYENYSK--KVLNLL 569

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               IRA      S+  G +++ A+    P  +I G  E + G + ++
Sbjct: 570 ENHEIRALTDH-RSETMGKKIREAEVNKIPYMLIVGEQEENDGTVSVR 616



 Score = 41.7 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 77/282 (27%), Gaps = 21/282 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS------LGKFLPDEDRPN 67
           G      K   +R R+ + ++   +  G++ + TP +   +         K+  D  +P 
Sbjct: 262 GLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHIGQKELYVTSGHYAKYGEDSFQPI 321

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
                    +G+   L+             +   I             R  + G     +
Sbjct: 322 S-----TPAEGEEFLLKPMNCP--------HHCEIYNNSPWSYRDLPKRYAEFGTVYRYE 368

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
                         T D        D L+    K  D  + + +    +    ++ L   
Sbjct: 369 QSGELHGLSRVRGFTQDDAHIFCTPDQLDEEFKKVIDLTMYVFSSLGFENFTTQVSLRDP 428

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +  ++ +      +K +   L  VK        +       G  L     D +     + 
Sbjct: 429 ENPDKYIGKEENWEKAENAILSAVKDKGLNYIVETGEAAFYGPKLDFMVKDALGRSWQLG 488

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
             +  + L E     +  +   NEL     + R    +  R 
Sbjct: 489 TIQVDYNLPERFD--LTYKGSDNELHRPVMIHRAPFGSMERF 528


>gi|167570156|ref|ZP_02363030.1| threonyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 635

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R   +  G+  I+TP++    SL +         + +F+ 
Sbjct: 261 GMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDR-SLWEASGHWQNYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + + +  +++        +   ++               G   RNE  G   
Sbjct: 319 TESEKRDYAVKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 40.6 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 32/349 (9%), Positives = 90/349 (25%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPKGWTLWQQVEQYMRRRLDAAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY +   N      + +       D                   L G+ + +     D
Sbjct: 323 KRDYAVKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     + SE I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEEQINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEDGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
               +  ++       G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 KALKACGVEWEELPGEGAFYGPKIEYHIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +            +  ++     +   Q   Q 
Sbjct: 502 SRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPAHAV-VLNIAESQVEYAQTVAQS 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGLRVSADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|167562968|ref|ZP_02355884.1| threonyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 635

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R   +  G+  I+TP++    SL +         + +F+ 
Sbjct: 261 GMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDR-SLWEASGHWQNYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + + +  +++        +   ++               G   RNE  G   
Sbjct: 319 TESEKRDYAVKPMNCPGHVQVF-KHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 40.6 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 32/349 (9%), Positives = 90/349 (25%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPKGWTLWQQVEQYMRRRLDAAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY +   N      + +       D                   L G+ + +     D
Sbjct: 323 KRDYAVKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     + SE I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEEQINSEAIAFNKLAMSVYEDFGFDRIDIKLSLRPEQRMGSDETWDHAEDGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
               +  ++       G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 KALKACGVEWEELPGEGAFYGPKIEYHIKDALGRSWQCGTLQLDMMLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +            +  ++     +   Q   Q 
Sbjct: 502 SRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPAHAV-VLNIAESQVEYAQTVAQS 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGLRVSADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|14590847|ref|NP_142919.1| prolyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|74579173|sp|O58734|SYP_PYRHO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3257420|dbj|BAA30103.1| 480aa long hypothetical prolyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 480

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 77/251 (30%), Gaps = 27/251 (10%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             E +         E+   E + I + + +    +  I       +    +     E ++
Sbjct: 158 FFEAHTAHADFEDAERQIKEDLEIFDNLMRKLALAYIISKRPEWDKFPGAFYSLGAEVVM 217

Query: 312 GFPVMNEKQKPVVFGSVGGGGR---YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                 +      +           Y+         +    G S  +   ++A+   +  
Sbjct: 218 PDGRTLQIGTMHNYKQNFSKAYNILYEKEDGTHDYVHQTTFGMSERLLAAVIAIHGDDRG 277

Query: 369 TNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                 + P+ +  +       + +  S  +   + LR AGIR  + L   K  G +   
Sbjct: 278 MVLPPTIAPIQVVIVPIPKKGSEEEVYSYAKGIEEELRDAGIRVYLDL-RDKRPGWKFYD 336

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  P+ +  G  +     + +                   R  ++ +IT+   ELV 
Sbjct: 337 WELKGVPVRVEVGPIDVQNSTVVL------------------ARRDKLEKITVKREELVD 378

Query: 484 TVKKILQENKE 494
            V+++ ++  E
Sbjct: 379 KVRELFEDIME 389



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 19/80 (23%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        ++I   I   I    E  G   +  P L       K           V
Sbjct: 30  PVKGMNVWLPYGLKIMRNIEKFIHEEMERTGHQEVLFPALIPETEFKKEAEHIAGFEGEV 89

Query: 71  FSLQDDDGQW-----ISLRY 85
           F      G       + LR 
Sbjct: 90  F-WVTHAGHEPLDVRLVLRP 108


>gi|295110969|emb|CBL27719.1| Histidyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 51

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 20/49 (40%)

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           +K A       A I G  E ++G   ++DL +G +    +     + + 
Sbjct: 1   MKNAGASGARWACILGPEELAKGCAAVRDLEEGSQTEVPLAQVPDYIQN 49


>gi|307730402|ref|YP_003907626.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307584937|gb|ADN58335.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 635

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 39/120 (32%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQDESP-GMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +    +               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-NHGLRSYRDLPLRYAEFGSCHRNESSGALH 370



 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    +  +   +        + R +  L    +       + P+ +  M+   +  
Sbjct: 493 GAEYVAEDNGRRRPIMLHRAIVGSMERFLGILIEHHAGAMP-AWLAPMQVVVMNIAENQA 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q   Q L+  G+R E  L  ++    +++       P  ++ G  ER    + ++
Sbjct: 552 EYAQSLAQSLQKQGVRVEADL-RNEKISYKIRQHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|57234472|ref|YP_181487.1| threonyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123759710|sp|Q3Z8G2|SYT_DEHE1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57224920|gb|AAW39977.1| threonyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 582

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +       +R+ I +  +  +   G+  + TP +   D L K         + ++S 
Sbjct: 205 GLVNWLPNGAIVRHLIEEFWKKEHLKRGYSLVYTPHIAKVD-LWKTSGHWGFYRENMYSP 263

Query: 74  QDDDGQWISLRY 85
            D DG+   L+ 
Sbjct: 264 MDIDGEEYVLKP 275



 Score = 36.7 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 7/56 (12%), Positives = 18/56 (32%), Gaps = 1/56 (1%)

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              +++ A     P  ++ G  E     + I+    G +        +S    ++ 
Sbjct: 522 MNQKIRQAQLAKIPYMLVVGDKEIETQSVSIRT-RSGSQCVMPFAEFKSMLIDKIK 576


>gi|168180987|ref|ZP_02615651.1| glycyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226950974|ref|YP_002806065.1| glycyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto]
 gi|182668133|gb|EDT80112.1| glycyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226842596|gb|ACO85262.1| glycine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 463

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/226 (8%), Positives = 55/226 (24%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +   +     +       E +   +  ++   + +        +    +        
Sbjct: 238 EWFNYWKDYCWNFLINLGINKESIRFRDHSQEELSHYSNATSDIEFLFPFGWGELWGVAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F +    +      +       +  V      ++ A    +         + LE   
Sbjct: 298 RTDFDLKKHMEHSGEDLNYLDPATKERYVPYCIEPSLGADRVVLAFLVDAYDEEELEGGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        K Q    ML +      +    + + G + +  
Sbjct: 358 VRNVLHLHPALAPFKAAVLPLSKKLSDKSQEVYSML-SKKFN--IDYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  I           + I+D     ++   I   E + E +
Sbjct: 415 DEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVNINELEKFIEDK 460


>gi|167756637|ref|ZP_02428764.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402]
 gi|237733925|ref|ZP_04564406.1| threonyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167702812|gb|EDS17391.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402]
 gi|229383006|gb|EEO33097.1| threonyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 577

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +RN +       +   G++ I+TP++   + L +     +   + +++ 
Sbjct: 202 GMPFFLPKGMILRNTLEQFWYEEHAKEGYEFIKTPIMMSRE-LWETSGHWENYKEDMYTS 260

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 261 M-VDDREFAIKPMNCPG 276



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    + +   +    F      + + ++              V +  ++ +   L   
Sbjct: 438 IDDKGEKVRPVMLHRVIFGSIERFIGILIEHFAGVFPLWLAPVQVKVLPVN-NEYHLDYA 496

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +  T++L+  G + E+     K  G +++       P  ++ G  ER    +  +    G
Sbjct: 497 KEVTELLKDKGFKVELDAREEK-LGYRIREGQMEKVPYLLVLGNNERDEKTVTYR--KHG 553

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           ++                 QIT+P  + V+ + + + + K
Sbjct: 554 EQK----------------QITVPFDDFVAMLNQQIVDKK 577


>gi|86606966|ref|YP_475729.1| prolyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|114152267|sp|Q2JSB6|SYP_SYNJA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|86555508|gb|ABD00466.1| prolyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 609

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG---V 70
           G         R+  +I D +R      G      P L+ ++   +     D   +    +
Sbjct: 42  GIYTYLPLLWRVLQKISDIVREEMNAIGAQECLLPQLQPAEI-WRESGRWDVYTQAEGIM 100

Query: 71  FSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           F+L+D  G+  +L     ++   LAR +  ++  +       +  
Sbjct: 101 FALKDRQGREQALGPTHEEVITLLARDLIRSYRQLPQILYQIQTK 145



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 20/125 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++     D +     +   Q L  AGI         +  G + K AD 
Sbjct: 499 IWPVAIAPYHVVVVVPNVSDPEQTKVAEKLVQELAAAGIETLWDDRDERA-GVKFKDADL 557

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  +  G     +G +++ + A G                    + IPI E+V+T+K
Sbjct: 558 IGIPYRLTTGRS-LKQGKVELAERATG------------------QAVEIPIEEVVATLK 598

Query: 487 KILQE 491
           + +  
Sbjct: 599 ERIAA 603


>gi|93007241|ref|YP_581678.1| threonyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|123264359|sp|Q1Q809|SYT_PSYCK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|92394919|gb|ABE76194.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Psychrobacter
           cryohalolentis K5]
          Length = 644

 Score = 53.3 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/359 (8%), Positives = 89/359 (24%), Gaps = 12/359 (3%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD-----NVGSSAETADAEMCMMMA 152
           +          +        +       +       +      +   +    +      A
Sbjct: 254 HMQEQAPGMVFWHANGWTIYQVLEQYMRKVQHDNGYEEIKTPQIVDRSLWERSGHWGNYA 313

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
             +     +  DY +   N      +  +      D                   L G+ 
Sbjct: 314 TNMFTTSSENRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F   + +  E  D +   L++  +    ++   +        G +E 
Sbjct: 373 MRVRGFTQDDAHIFCTQSQIQQEVADFIKLTLAVYEDFGFDKIIMKLSTRPEKRVGSDES 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVG 329
              +E       +S+ +  +     G  Y     +        + +              
Sbjct: 433 WDFAEKALADALDSSGLDWAYLPGEGAFYGPKIEFSLKDSLGRVWQCGTIQVDPNMPERL 492

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
                +    R     +           + + +++               +  M+     
Sbjct: 493 DAEFVNEQNEREVPIMLHRAILGSFERFIGILIENYAGWMPVWLAPQQ--VVVMNITDKQ 550

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +     L+ AG+RA   L  ++  G +++       P  ++ G  E   G + ++
Sbjct: 551 ADACENVVNELKKAGLRAISDL-RNEKIGFKIREKTLERIPYMLVLGDKEVESGSINVR 608



 Score = 41.7 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/149 (7%), Positives = 40/149 (26%), Gaps = 3/149 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R +  + G++ I+TP +       +        
Sbjct: 255 MQEQAP-GMVFWHANGWTIYQVLEQYMRKVQHDNGYEEIKTPQIVDRSLWERS-GHWGNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 313 ATNMFT-TSSENRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 371

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTL 155
                      +      +++   +AD +
Sbjct: 372 LMRVRGFTQDDAHIFCTQSQIQQEVADFI 400


>gi|325685802|gb|EGD27875.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 643

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 1/140 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   +       
Sbjct: 499 SYIGADGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNLDAHSDY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L   G RAE+    ++  G +++ +  +  P  ++ G  E + G + ++    
Sbjct: 559 AKKVRDELVAKGFRAEIDF-RNEKLGYKIRESQTQKVPYTLVLGDDEMNAGTVNVRPYGT 617

Query: 453 GKELSREIKNNESWREARVA 472
            ++ S  +          VA
Sbjct: 618 EEQNSESLAEFMDKLSKDVA 637



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 50/186 (26%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+  + TP+L   D+  K         + +F  
Sbjct: 259 GLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLDAY-KTSGHWAHYREDMFPP 317

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
                G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 318 MGMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 377

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A    ++ D      I    + +   + K  D       + 
Sbjct: 378 MTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDYYFRLSYRDPKNTDKYFANDEMW 437

Query: 186 GDDKLN 191
              +  
Sbjct: 438 ERSQSM 443


>gi|325265785|ref|ZP_08132472.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982768|gb|EGC18393.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 637

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/379 (12%), Positives = 111/379 (29%), Gaps = 21/379 (5%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  +++       +     +R+        +        +       D +     +
Sbjct: 266 HPRGWTLWQVIEQHMRRELDAAGYREVKT---PQIMDKTFWEKSGHWANYKDNMFLTASE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + +Y +   N      I         D                   L G+ + +     D
Sbjct: 323 KREYAVKPMNCPGHVQIFNNTLRSYRDLPMRLAEFGSCHRNEPSGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F     +  E     +  + I  +     +   +        G +E+   +E   +
Sbjct: 382 DAHIFCTEDQIAEETRKFNLLVMKIYQQFGFEHVSVKLSLRPEQRAGSDEIWDKAEQGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
               +  ++       G  Y     Y  I      + +   +    V         V+  
Sbjct: 442 DALTACGVEWQELPGEGAFYGPKVEYH-IKDALGRSWQCGTIQLDFVLPERLDAEYVAED 500

Query: 342 KGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +  P       +G     + +   E + +    + PV +  M+         +   + 
Sbjct: 501 NSKKRPVMLHRAILGSLERFIGILIEEHAGSFPLWLAPVQMVVMNITEKQADYCREVVEK 560

Query: 400 LRTAGIRAEMFLGSSK---NFG--NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           L+ AG RAE  L + K        +Q++Y      P  I+ G  E   G + ++   KG+
Sbjct: 561 LKAAGFRAEADLRNEKIGYKIRDNSQMRY------PYQIVVGDKEMENGQVAVR--RKGE 612

Query: 455 EL-SREIKNNESWREARVA 472
           +L S ++++  +  +  +A
Sbjct: 613 DLGSMKVEDFIALLQKEIA 631



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   I   +R   +  G+  ++TP +    +  +           +F L
Sbjct: 261 GMVFWHPRGWTLWQVIEQHMRRELDAAGYREVKTPQIMDK-TFWEKSGHWANYKDNMF-L 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TASEKREYAVKPMNCPGHVQIFNNTLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|227827123|ref|YP_002828902.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227458918|gb|ACP37604.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 484

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 1/92 (1%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           + I ++ H  + ++  +    +LR+        L        Q   AD    PL I   +
Sbjct: 385 IGIASIHHSDEYINIAEKVDLILRSLDY-VTFKLFERGKIDAQYAKADTLGIPLVITIDS 443

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                  + I++     ++   I       + 
Sbjct: 444 KTLEENTVTIRNRDTKAQIRVNIGEIAQAVKN 475


>gi|56963999|ref|YP_175730.1| prolyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822102|sp|Q5WFT6|SYP_BACSK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56910242|dbj|BAD64769.1| proline-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 566

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R ++  G         R   +I   IR   +  G   +  P L  ++ L +  
Sbjct: 26  MLRAGMMR-QIAAGVYAYLPLAKRTIAKIEAIIREELDAIGAQELTLPSLHPAE-LWQAS 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              +     +  L+D   +  +L  
Sbjct: 84  GRWEAMGDELVRLKDRHNRDFALGP 108



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  + D  +  +     +R AGI   ++    +  G + 
Sbjct: 457 DEAGIVWPKAVAPFDVHLLALNVKNEDQKTLAEQLYSDIRQAGIDV-LYDDRPERAGVKF 515

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           K AD    P+ +  G      G++++K    G++L         W    + +
Sbjct: 516 KDADLIGLPVRVAVGKR-AGEGIIEVKVRKTGEQLELTASELVRWLNDFLRE 566


>gi|330816669|ref|YP_004360374.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327369062|gb|AEA60418.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 635

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 39/120 (32%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQEESP-GMVFWHPKGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +    +               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-NHGLRSYRDLPLRYAEFGSCHRNEASGALH 370



 Score = 41.7 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    +  +   +        + R +  L    +       + PV +  M+   +  
Sbjct: 493 GAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMP-SWLAPVQVVVMNIAENQA 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +  +Q L+  G+R E  L  ++    +++       P  ++ G  ER    + ++
Sbjct: 552 EYVRSLSQSLQKQGLRVEADL-RNEKISYKIREHTLEKVPYLLVAGDKEREAQTVAVR 608


>gi|319892622|ref|YP_004149497.1| Glycyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162318|gb|ADV05861.1| Glycyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 464

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/229 (6%), Positives = 48/229 (20%), Gaps = 4/229 (1%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                +       E +       +  +                   +            +
Sbjct: 239 WQNYWKDFAANWLESLGLAKENTRLRDHDEDELSHYSN-ATTDIEYRFPFGWGELWGIAS 297

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
              ++         E        +      Y    S    +   A          +   K
Sbjct: 298 RTDFDLKKHSEHSGEDFSYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSK 357

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
              +  +    + P     +       +      + L +     +     S++ G + + 
Sbjct: 358 DARTVLHFHPAIAPYKAAVLPLSKKLSADAIKVYEQL-SEDFVVDFD--ESQSIGKRYRR 414

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            D    P  I           + ++D    +++   I    ++   +V 
Sbjct: 415 QDEIGTPYCITFDFDSLEDQQVTVRDRDTMEQVRMPISELNAFLAEKVK 463


>gi|229584291|ref|YP_002842792.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|228019340|gb|ACP54747.1| glycyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 484

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 1/92 (1%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           + I ++ H  + ++  +    +LR+        L        Q   AD    PL I   +
Sbjct: 385 IGIASIHHSDEYINIAEKVDLILRSLDY-VTFKLFERGKIDAQYAKADTLGIPLVITIDS 443

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                  + I++     ++   I       + 
Sbjct: 444 KTLEENTVTIRNRDTKAQIRVNIGEIAQAVKN 475


>gi|254521784|ref|ZP_05133839.1| prolyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219719375|gb|EED37900.1| prolyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 567

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 41/162 (25%), Gaps = 12/162 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G    + P ++  + L +      + 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVERIVREEMDRAGAVEFQIPTIQPKE-LWEQTGRWQKF 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTA-----PLARYVAENFDTIV----FPCRTYRIGPVFRN 117
              +  ++D   Q        TA       AR    ++  +          +R     R 
Sbjct: 90  GPQLLKIKDRKDQVFCYSP--TAEEAACDFARSELSSYKQLPVNFYQVQTKFRDEIRPRF 147

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  F                     M    +     +G
Sbjct: 148 GVMRSREFLMKDAYSFHLHDECLVREYENMKSAYSRIFTRLG 189



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/194 (10%), Positives = 47/194 (24%), Gaps = 9/194 (4%)

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
            +    +  +  +     +R +      +    L      E       G          +
Sbjct: 369 HLAGVNWGRDLAEPEVADIRNVRAGDRALDGGELKIARGIEVGHVFQLGRTYAKALDATV 428

Query: 338 VSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           +       V A G        +VA               +      V++  ++   D+  
Sbjct: 429 LDENGKAAVMAMGCYGIGISRVVAAAIEQNHDDAGIIWPDAMAPWQVVVCVINPKGDAAV 488

Query: 392 KYQM--YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
                   Q LR AG+ A +        G      +    P  ++      + G  + + 
Sbjct: 489 ADAAASLLQELRDAGLDAALD-DRGLRPGAMFADMELIGIPHRVVVSERGLAAGTYEYRS 547

Query: 450 LAKGKELSREIKNN 463
               +  S +    
Sbjct: 548 RRASEAESLDKATL 561


>gi|184155197|ref|YP_001843537.1| prolyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|226701302|sp|B2GBM5|SYP_LACF3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183226541|dbj|BAG27057.1| prolyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 573

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 4/98 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+  +I   IR   +  G   +  P L  +D L K     +     +F L+D  
Sbjct: 42  YLPLAYRVIRKIEQIIREEMDKAGAVEMLLPGLLPAD-LWKESGRYEAYGDNLFKLKDRR 100

Query: 78  GQWISLRY--DLTA-PLARYVAENFDTIVFPCRTYRIG 112
            +   L    + T   + R    ++  +       +  
Sbjct: 101 ERDFILGPTHEETVTSILRDAIHSYKKLPLVVYQLQDK 138



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 8/130 (6%)

Query: 350 GFSIGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IG+SRL+ A+    +          +      +I       D ++  +  T  L  A
Sbjct: 443 CYGIGVSRLLSAISEQNADENGLVWPQAVAPFDIHVIPVNAKKEDQMAMAEGITANLEEA 502

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G    +     +  G +   AD    P+ +  G      G+++IK    G+ L    +  
Sbjct: 503 GYEVLVDDRKERA-GVKFADADLIGVPIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEEL 560

Query: 464 ESWREARVAQ 473
            +     + Q
Sbjct: 561 ATNIAILLKQ 570


>gi|225574947|ref|ZP_03783557.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037794|gb|EEG48040.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM
           10507]
          Length = 667

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/265 (10%), Positives = 71/265 (26%), Gaps = 15/265 (5%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           +     +        L  +    +  +   + EK + +            +  NEL    
Sbjct: 416 KKCVQLAKFVLTTLGLQDDVTYRLSKWDPNNTEKYIGDAQYWETSQNKMRELLNELE--L 473

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
           + V   G  +          + +      +    L F +  +                D 
Sbjct: 474 DFVEADGEAAFYGPKLDIQAKNVYGKEDTMITIQLDFALAEQFHMYY----------IDE 523

Query: 337 LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
              +     +  T        L   ++              V +  +      L      
Sbjct: 524 NGEKKMPFIIHRTSMGCYERTLAWLIEKYAGLFPTWLCPEQVRVLPIS--EKYLDYANQV 581

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L+  GIR+ +    S+  G +++ +  +  P  ++ G  E     + ++    G E 
Sbjct: 582 NAQLKANGIRSSVD-DRSEKIGYKIRESRLQKVPYMLVVGAKEEQEEKVSVRSRYLGDEG 640

Query: 457 SREIKNNESWREARVAQITIPISEL 481
            +++K+        +    I   E+
Sbjct: 641 MKDLKSFIDHICEEIRTKEIRKIEV 665



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 5/116 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K + I   +   I ++ +N +G+   +TPL+  SD   K     D    G+F 
Sbjct: 276 GLPLLMPKGVIILKELQRWIEDLEDNEWGYIRTKTPLMAKSDLY-KISGHWDHYKDGMFV 334

Query: 73  LQD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           L D   D +  +LR  +T P   YV +                         G   
Sbjct: 335 LGDEEKDKEVYALRP-MTCPFQYYVYKASQHSYRELPLRYSETSTLFRNEDSGEMH 389


>gi|150390772|ref|YP_001320821.1| glycyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|254781872|sp|A6TSJ4|SYG_ALKMQ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|149950634|gb|ABR49162.1| glycyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 462

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/246 (8%), Positives = 59/246 (23%), Gaps = 14/246 (5%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           EQ+++       D  +         K  +         + +     +   + +       
Sbjct: 222 EQMELEFFCKPGDDLEWFDYWSNFCKKWLLDLSMKETSIRLRAHTEEELSHYSNATTDIE 281

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
                 +           F +    +   V         Y   V+  K            
Sbjct: 282 FKFPFGWGELWGIADRTDFDLKQHTEHSGVQLI------YQDPVTNEKYVPYCIEPSLGA 335

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI--------R 406
               +  L          ++   +++      +   +     T+ L+   +        +
Sbjct: 336 DRVTLAFLVDAYEEEQIDEKDSRIVLKLHPALAPFKAAVLPLTKKLKEQSLELFEKLSDK 395

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +    + + G + +  D    P  I           + ++D    ++    I   E +
Sbjct: 396 FMIDYDDAGSIGKRYRRHDEIGTPYCITYDFDTLEDNCVTVRDRDTMEQQRVAIDELEVF 455

Query: 467 REARVA 472
            E ++ 
Sbjct: 456 LEEKIK 461


>gi|321313312|ref|YP_004205599.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019586|gb|ADV94572.1| threonyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 638

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/435 (11%), Positives = 116/435 (26%), Gaps = 88/435 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN +    R +  N G+D + TP    +  L +     D     ++  
Sbjct: 264 GMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTP-FMMNQRLWEQSGHWDHYRDNMY-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +++             +         +YR  P+   E     R       + 
Sbjct: 322 SEVDDTRFAMKPMNCPG-------HMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNG 374

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +        +              +++D +    G     +L+ R
Sbjct: 375 MLRVRTFCQDDAHIFVREDQIESEIKEAI----------RLIDEVYRTFGFEYSVELSTR 424

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  D L +   + +  +L E              L+ E  +   +F    ++  + 
Sbjct: 425 PEDSLGDDSLWEASERALARVLEE------------LGLSYEINEGDGAFYGPKIDFHIK 472

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +         A ++      +  +      ++   I   +  VR +  +   V+ +I  F
Sbjct: 473 D---------ALKRSHQCATIQLDFQMPEKFDLTYINEHNEKVRPVVIH-RAVFGSIDRF 522

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +  +     F       +   +       +           ++   LK          
Sbjct: 523 FGILIEHYGGAFPVWLAPIQVQIIPVSHVHLD--------YCRKVQAELKQAGI------ 568

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                                        AGI        ++  G +++ +  +  P  +
Sbjct: 569 ----------------------------RAGI-----DERNEKLGYKIRESQVQKIPYVL 595

Query: 434 IQGTGERSRGMLQIK 448
           + G  E     + ++
Sbjct: 596 VLGDHEEQENAVNVR 610


>gi|307634865|gb|ADI84351.2| threonyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 645

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    +         + LRT G+R +     ++  G +++ A  +  P  +
Sbjct: 545 WLSPVQAIVLTVTDNQQPYAAQVFETLRTNGVRVQKDF-RNEKLGFKIREAQLQKIPYML 603

Query: 434 IQGTGERSRGMLQ 446
           + G  E   G + 
Sbjct: 604 VIGDKEVESGTVT 616


>gi|257053756|ref|YP_003131589.1| prolyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692519|gb|ACV12856.1| prolyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 484

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 74/249 (29%), Gaps = 19/249 (7%)

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            A E+    L     L                  +    +T    EA++      +    
Sbjct: 174 DAVEEMETRLGQYKRLYEDVLAMPVLSGRKPDHDKFPGAHTTTTVEALMPDGKSVQGGTS 233

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGP 377
              G+          V   +      T       R + AL                    
Sbjct: 234 HYLGTSFAEAYDVTYVDEDEEVKTAHTTSWGLSWRALGALFMTHSDDQGLVLPPTLAETQ 293

Query: 378 VLITTM---DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY--ADRRNCPLA 432
           V+I  +   D   D L+  +     L  AG+R E+     +N G   KY   +    PL 
Sbjct: 294 VVIVPIWDEDSKDDVLAYAEDVEADLEDAGVRVELDDRDHRNPG--FKYNEHELNGVPLR 351

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI-----SELVSTVKK 487
           I  G+ E +   L +     G+E++ E  N     E  +  I   +       L   +++
Sbjct: 352 IEIGSYEVADDELTLVHRPDGEEITVERDNVAETVEDHLDTIFAKLYASAEETLEGEIRE 411

Query: 488 ILQENKEEI 496
              E++EEI
Sbjct: 412 --AESREEI 418


>gi|170754288|ref|YP_001783158.1| glycyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169119500|gb|ACA43336.1| glycyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 463

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/226 (8%), Positives = 55/226 (24%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +   +     +       E +   +  ++   + +        +    +        
Sbjct: 238 EWFNYWKDYCWNFLINLGINKENIRFRDHSQEELSHYSNATSDIEFLFPFGWGELWGVAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F +    +      +       +  V      ++ A    +         + LE   
Sbjct: 298 RTDFDLKKHMEHSGEDLNYLDPATKERYVPYCIEPSLGADRVVLAFLVDAYDEEELEGGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        K Q    ML +      +    + + G + +  
Sbjct: 358 VRNVLHLHPALAPFKAAVLPLSKKLSDKSQEVYSML-SKKFN--IDYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  I           + I+D     ++   I   E + E +
Sbjct: 415 DEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVSINELEKFIEDK 460


>gi|168070814|ref|XP_001786949.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162660100|gb|EDQ48237.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 375

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 72/258 (27%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +R  +    R +    G+  + TPL+   + L +     +     ++  
Sbjct: 49  GMPFYLPKGMTVRTELEQFSRELQLQEGYQEVRTPLMMN-NRLWEQSGHWEHYKDNMY-F 106

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +L+             +         +YR  P+   E     R       + 
Sbjct: 107 SEVDDATFALKPMNCPG-------HMLIFKNTLHSYRELPIRMMEFGQVHRHEFSGALN- 158

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +       D     +M + +E    +       + +    +  +E      D   +E 
Sbjct: 159 GMMRVRTFCQDDAHLYVMPEQIEDEINQAISLIGRMYDIFGFEYKIELSTRPEDSMGSEE 218

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L         +    +GV+  + EG          G  +    +D +         +   
Sbjct: 219 LWDQAERALQNVLDRRGVQYRINEGDG-----AFYGPKIDFHILDALKRSWQCGTIQLDF 273

Query: 254 ELYELVKGTIAGEKGFNE 271
           ++ E    T  GE     
Sbjct: 274 QMPEKFDLTYIGEDSLKH 291



 Score = 38.3 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 58/195 (29%), Gaps = 6/195 (3%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             ++I+  +S +    +    E    +        G  EL   +E   ++  +   ++  
Sbjct: 180 IEDEINQAISLIGRMYDIFGFEYKIELSTRPEDSMGSEELWDQAERALQNVLDRRGVQYR 239

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--- 349
                G  Y     +  IL     + +   +              +     ++ P     
Sbjct: 240 INEGDGAFYGPKIDFH-ILDALKRSWQCGTIQLDFQMPEKFDLTYIGEDSLKHRPVVIHR 298

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                I R I  L    +    +  + PV +  +                LR AGIR E 
Sbjct: 299 AIYGSIDRFIGILTEHYAGAFPLW-LAPVQVKLLPVSDHYADYALQVQSQLRAAGIRVET 357

Query: 410 FLGSSKNFGNQLKYA 424
            L S K  G +++ A
Sbjct: 358 DLRSEK-LGYKIREA 371


>gi|157826951|ref|YP_001496015.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|166225492|sp|A8GVV1|SYT_RICB8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157802255|gb|ABV78978.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 633

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/382 (9%), Positives = 96/382 (25%), Gaps = 10/382 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV-----DNVGSSAETADAEMCMMMA 152
           +F         +                R+  +          +   +    +       
Sbjct: 254 HFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVDKSLWELSGHWEKFR 313

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D + A+        +   N      I ++      D                   L G+ 
Sbjct: 314 DDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +T E +        +  +    ++            G +E 
Sbjct: 373 MRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEVRAGSSET 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E   K          +     G  Y     +  +        +   +    V    
Sbjct: 433 WDKAENALKEAVEKAGYSYTLNPGEGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLPER 491

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                V+    +  P       +G     + +   E +      + PV +      SD  
Sbjct: 492 LDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWLAPVQVAIATITSDLN 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L  +G+R ++ +   K    +++    +  P+  + G  E+    + I+ L
Sbjct: 552 DYALEVQKALIESGVRVDINISPDK-INYKIREFSNQKVPMIAVIGKQEKENKQVTIRRL 610

Query: 451 AKGKELSREIKNNESWREARVA 472
              ++    I+    +     +
Sbjct: 611 GTTEQEVLSIEQLIEYIREENS 632



 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   + N I   IR      G+  ++TP+L    SL +     ++    +F+L
Sbjct: 261 GMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVDK-SLWELSGHWEKFRDDMFAL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 ET-DDKTLALKPMNCP 334


>gi|56696018|ref|YP_166372.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81820109|sp|Q5LUD3|SYP_SILPO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|56677755|gb|AAV94421.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 464

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  ++ + +       G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQAQAGIYSWLPLGFKVLRKLENIVHEEQIRAGHIPMLMPTLQSAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            + +  + D  G+ +       +L   + R    ++  +       +  
Sbjct: 90  GQEMLRITDRHGRDMLFGPTNEELITDIFRGHVSSYKDLPLTLYHIQWK 138


>gi|76800818|ref|YP_325826.1| glycyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|76556683|emb|CAI48255.1| glycine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 578

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 34/104 (32%), Gaps = 2/104 (1%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V +  +        + +  ++ LR AG   E+    + N G + +  D    P  + 
Sbjct: 476 PTTVAVFPLMTKDGLDDRAREVSETLREAGF--EVAYDDTGNIGRRYRRQDEVGTPYCVT 533

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
                +  G + I++     +    ++   +     V   T+  
Sbjct: 534 VDYETQEDGTVTIRERDSTDQTRVPVEGLPAAIAELVDGATLAE 577


>gi|258404181|ref|YP_003196923.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796408|gb|ACV67345.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 649

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 19/105 (18%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            ++   D     Q     LR AGIRAE  L  ++  G +++ A     P  ++ G  E +
Sbjct: 542 VLNITDDHAEYAQQCVDQLRAAGIRAEADL-RNEKLGYKVREAQMEKIPYVLVVGEQEVA 600

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                ++ L  GK +                   +P+ +++  ++
Sbjct: 601 TSGANLR-LRGGKNIGV-----------------LPVDDIIDRIR 627



 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 9/105 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  + D  R  +   G+  ++ P L   +   +     D   + ++  
Sbjct: 261 GMPLWHPKGALIRTILEDFSRKEHLRRGYQLVQGPTLLRQELWQRS-GHYDNYRENMY-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            + D Q   ++             +        R+YR  P+   E
Sbjct: 319 TEIDDQAYGIKPMN-------CLAHMLIYNTKIRSYRDLPIRYFE 356


>gi|256847045|ref|ZP_05552491.1| prolyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715709|gb|EEU30684.1| prolyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 577

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 53/135 (39%), Gaps = 8/135 (5%)

Query: 345 NVPATGFSIGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           ++    + IG++RL+ A+    +        ++I      +I      +D +      ++
Sbjct: 438 DMIMGCYGIGVTRLLSAVAEQNADEYGLVWPDSIAPFDVHVIPVNAKKADQMKMANEISE 497

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L  AG+   +     +  G +   +D    PL +  G    S G+++IK    G+ +  
Sbjct: 498 QLEKAGLEVLVDDRKERA-GVKFADSDLIGIPLRVTVGKK-ASEGIVEIKIRKTGETVEV 555

Query: 459 EIKNNESWREARVAQ 473
           + +   +  +  + Q
Sbjct: 556 KTEEVANTVQILLKQ 570



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+  ++   IR   E      +ETP +  +D L +     +     +F  +D +
Sbjct: 42  YLPLAYRVIRKVKAIIREEMEKADAFEMETPSMLPAD-LWQQTGRYEAYGDTLFKFKDRN 100

Query: 78  GQWISLRY 85
            +   L  
Sbjct: 101 DREHILGP 108


>gi|210623134|ref|ZP_03293600.1| hypothetical protein CLOHIR_01550 [Clostridium hiranonis DSM 13275]
 gi|210153811|gb|EEA84817.1| hypothetical protein CLOHIR_01550 [Clostridium hiranonis DSM 13275]
          Length = 580

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/247 (10%), Positives = 72/247 (29%), Gaps = 5/247 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  +     +++  +I + I+   E+  F  +    L  S+ L +      R 
Sbjct: 47  MIKKSASGIYNQLPLGLKVERKIENIIKEEVEDADFREMLCSALIPSE-LWQESGRWARR 105

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +F L+D  G+   L     ++   + R    ++  +       +       +     
Sbjct: 106 GAEMFRLEDRTGKEFCLGPTHEEVFTDIVRQEVSSYKQLPVKLYQIQSKYRDEKKPRFGA 165

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
              +             E +  +    M    + +  +    +  +     ++G    I 
Sbjct: 166 IRTKSFTMFDAYSFDKDEESLNKSYEEMIAAFKRIFDRCGVKYSLVEAESGIEGAPSSIE 225

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                ++ E  + +   D       +  + +  E   +  G   +     +  I  +  F
Sbjct: 226 FMVKSEIGEDELAI-CSDCTYAANRESAECMPREFEAEELGTLEEVHTPDARTIKDLEEF 284

Query: 244 LSIDLEK 250
              +  +
Sbjct: 285 FGAEGNR 291



 Score = 41.7 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 35/103 (33%), Gaps = 2/103 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              ++      +I     + D ++  +   + L+  G+   +    ++  G + K +D  
Sbjct: 478 WPLSVAPFEVEIIPVNLKNEDVVNTAERIYKELKLMGVDVLIDDRDAR-PGTKFKDSDLI 536

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             P+ I  G      G++++K     +       +       R
Sbjct: 537 GIPVRITVGRD-LKEGLVEMKFRNSEERELISAVDAAEIVRDR 578


>gi|171058428|ref|YP_001790777.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|238689097|sp|B1XYZ3|SYT_LEPCP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|170775873|gb|ACB34012.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 637

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/182 (9%), Positives = 48/182 (26%), Gaps = 9/182 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R +Y + G+  ++ P +     L +     D+    +F+ 
Sbjct: 265 GVVFWHPKGWTVWQQVEQYMRRVYRDNGYQEVKGPQI-LDKGLWEKTGHWDKYRDNMFT- 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 323 TESEKRDYALKPMNCPG-------HILIFKQGIKSYRDLPLRYGEFGQCHRNEPSGGLHG 375

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +       L               +    + + +          ++ 
Sbjct: 376 IMRVRGFTQDDGHIFCTEDQILPECDAFTTLLQKVYADFGFTEILYKVATRPEKRIGSDE 435

Query: 194 LI 195
           L 
Sbjct: 436 LW 437



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 33/89 (37%), Gaps = 3/89 (3%)

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + ++    +         V +  +          +   + L+  G+R  + L  ++    
Sbjct: 527 ILIEEHAGALPFWLAPTQVSVLNITDGQA--DYARDVARSLQKQGLRVALDL-RNEKITY 583

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +++    +  P  I+ G  ER+ G + ++
Sbjct: 584 KIREHSLQKVPYLIVVGDKERASGAVAVR 612


>gi|157693298|ref|YP_001487760.1| threonyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157682056|gb|ABV63200.1| threonine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 646

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/347 (11%), Positives = 104/347 (29%), Gaps = 20/347 (5%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              +     E     M M   D +       +   I  N       +  +I   G     
Sbjct: 312 TSGHWAHYQEDMFPVMEMDNEDLVLRPMNCPHHMMIYKNEPHSYRELPIRIAELGTMHRY 371

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           E    L  + ++    L    + +   +  +    T            ++  +  D   +
Sbjct: 372 EMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTV----------RLIEEVYQDFGLN 421

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
            +      +     EK F++  + ++         + +        G   + G   +  +
Sbjct: 422 DYTFRLSYRDPEDTEKYFDDDAMWNKAQSMLKDAMDELGHDYYEAEGEAAFYGPKLDVQV 481

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF-----SIGISRLIVALKSLE 366
              +  E+    V        R+D       G++           S     +   ++  +
Sbjct: 482 KTALGKEETLSTVQLDFLLPERFDLTYIGEDGKHHRPVVIHRGVVSTMERFVAFLIEEYK 541

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            +           +  +   S  L   +   + L+  G+R E+     +  G +++ A  
Sbjct: 542 GALPTWLAPVQFQVIPVSP-SVHLDYAKKVQERLQLEGLRVELD-SRDEKIGYKIREAQM 599

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +  P  ++ G  E   G + ++    G++ S  + + E++ +  VA+
Sbjct: 600 QKIPYMLVVGDQEAENGAVNVR--KYGEQDSETM-DLEAFVKHAVAE 643



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 70/258 (27%), Gaps = 9/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G++ + TP+L   +   K         + +F +
Sbjct: 268 GLPLWLPKGATIRRVIERYIVDKEVRLGYEHVYTPVLANVELY-KTSGHWAHYQEDMFPV 326

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D + + LR             +         +YR  P+   E     R+        
Sbjct: 327 MEMDNEDLVLRPMNCP-------HHMMIYKNEPHSYRELPIRIAELGTMHRYEMSGALS- 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                   T +     +  D ++   I+       +     L+    ++     +   + 
Sbjct: 379 GLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIEEVYQDFGLNDYTFRLSYRDPEDTEKY 438

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  +K        +  L  +           G  L  +    +    ++   +   
Sbjct: 439 FDDDAMWNKAQSMLKDAMDELGHDYYEAEGEAAFYGPKLDVQVKTALGKEETLSTVQLDF 498

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E    T  GE G + 
Sbjct: 499 LLPERFDLTYIGEDGKHH 516


>gi|148381458|ref|YP_001255999.1| glycyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933636|ref|YP_001385833.1| glycyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153935948|ref|YP_001389240.1| glycyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148290942|emb|CAL85078.1| glycyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929680|gb|ABS35180.1| glycyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152931862|gb|ABS37361.1| glycine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 463

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/226 (8%), Positives = 55/226 (24%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +   +     +       E +   +  ++   + +        +    +        
Sbjct: 238 EWFNYWKDYCWNFLINLGINKENIRFRDHSQEELSHYSNATSDIEFLFPFGWGELWGVAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F +    +      +       +  V      ++ A    +         + LE   
Sbjct: 298 RTDFDLKKHMEHSGEDLNYLDPATKERYVPYCIEPSLGADRVVLAFLVDAYDEEELEGGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        K Q    ML +      +    + + G + +  
Sbjct: 358 VRNVLHLHPALAPFKAAVLPLSKKLSDKSQEVYSML-SKKFN--IDYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  I           + I+D     ++   I   E + E +
Sbjct: 415 DEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVNINELEKFIEDK 460


>gi|330815470|ref|YP_004359175.1| Prolyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327367863|gb|AEA59219.1| Prolyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 578

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 34/102 (33%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +  +
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKDNDFVIGPTHEEVITDIARNQIKSYRQMPVNFYQIQTK 138


>gi|313124186|ref|YP_004034445.1| threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280749|gb|ADQ61468.1| Threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 643

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 1/140 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   +       
Sbjct: 499 SYIGADGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNLDAHSDY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L   G RAE+    ++  G +++ +  +  P  ++ G  E + G + ++    
Sbjct: 559 AKKVRDELVAKGFRAEIDF-RNEKLGYKIRESQTQKVPYTLVLGDDEMNAGTVNVRPYGT 617

Query: 453 GKELSREIKNNESWREARVA 472
            ++ S  +          VA
Sbjct: 618 EEQNSESLAEFMDKLSKDVA 637



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 51/186 (27%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+  + TP+L   D+  K         + +F  
Sbjct: 259 GLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLDAY-KTSGHWAHYREDMFPP 317

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 318 MDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 377

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A    ++ D      I    + +   + K  D       + 
Sbjct: 378 MTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDYYFRLSYRDPKNTDKYFANDEMW 437

Query: 186 GDDKLN 191
              +  
Sbjct: 438 ERSQSM 443


>gi|300812909|ref|ZP_07093302.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496107|gb|EFK31236.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 643

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 1/140 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   +       
Sbjct: 499 SYIGADGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNLDAHSDY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L   G RAE+    ++  G +++ +  +  P  ++ G  E + G + ++    
Sbjct: 559 AKKVRDELVAKGFRAEIDF-RNEKLGYKIRESQTQKVPYTLVLGDDEMNAGTVNVRPYGT 617

Query: 453 GKELSREIKNNESWREARVA 472
            ++ S  +          VA
Sbjct: 618 EEQNSESLAEFMDKLSKDVA 637



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 51/186 (27%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+  + TP+L   D+  K         + +F  
Sbjct: 259 GLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLDAY-KTSGHWAHYREDMFPP 317

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 318 MDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 377

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A    ++ D      I    + +   + K  D       + 
Sbjct: 378 MTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDYYFRLSYRDPKNTDKYFANDEMW 437

Query: 186 GDDKLN 191
              +  
Sbjct: 438 ERSQSM 443


>gi|298489744|ref|YP_003719921.1| prolyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298231662|gb|ADI62798.1| prolyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 597

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G +    P L+ ++ L K     D   K    
Sbjct: 37  SGVYAYLPLMWRVLQKVSQIVREEMNATGAEECLLPQLQPAE-LWKDSGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +FSL D   Q + L     ++   +AR +  ++  +       +  
Sbjct: 96  MFSLIDRREQQLGLGPTHEEVITTVARDMIRSYRQLPLHLYQIQTK 141



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 20/124 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++      D+  +   +     L  AG+   +     +  G + K AD 
Sbjct: 494 IWPVAIAPYHSIITIPNIKDAQQIEVAEKLYTELNKAGVETLLDDRDERA-GVKFKDADL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I+ G    + G +++           +  N ES          I I E+V+T++
Sbjct: 553 IGIPFRIVTG-RAIANGKVEV----------VKRANRES--------QQIAIEEVVNTLQ 593

Query: 487 KILQ 490
           + L+
Sbjct: 594 QWLK 597


>gi|330985980|gb|EGH84083.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 192

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 4/126 (3%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-AR 93
            I+   G +    P L   D+  +     +  +  +++  D  G+   L  + TA    R
Sbjct: 9   AIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIS-QMWAFNDKAGRACCLIPEATALFQER 67

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
             +E           + +   +R E+   GR+R+F Q  ++ +G S + A      +   
Sbjct: 68  --SEALLNGRREAVFFYVARCYRCERPQAGRYREFTQLGLEILGPSPQQALQRSQAICTG 125

Query: 154 TLEAVG 159
            L+++G
Sbjct: 126 FLDSLG 131


>gi|301300275|ref|ZP_07206484.1| proline--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852116|gb|EFK79791.1| proline--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 570

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/248 (10%), Positives = 74/248 (29%), Gaps = 6/248 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+  +I + IR   +      +  P +  ++ L +     +     
Sbjct: 34  QITAGMYAYLPLAYRVMKKIENIIREEMDRIDAVEMLVPAVVPAE-LWQESGRYETYGPT 92

Query: 70  VFSLQDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +F L+D   +   L    + T   + R   +++  +       ++     N         
Sbjct: 93  LFKLKDRHERDFILGPTHEETFTTIVRDAIKSYKKLPLYLYQIQMKYRDENRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +             + +  ++        + +  +   D+   I +   + G   K    
Sbjct: 153 REFLMLDGYSFHVDDASMEKVFNDTDKAYQRIFERCGLDFRGIIADSGAMGGNRSKEFQA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +   + +    + D      +    L + +   +   D  K A   ++ I  +  FL 
Sbjct: 213 IAEVGEDTIAYSDSSDYAANIEMAKN-LRIPKQSHETPKDLEKVATPNAKTIVEVAEFLG 271

Query: 246 IDLEKSMH 253
            D +  + 
Sbjct: 272 TDTQNEIK 279



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 52/145 (35%), Gaps = 8/145 (5%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSD 388
           D L    +   +    + IG+SRL+ A+          +    I      ++     +  
Sbjct: 424 DVLDENGRQVPMRMGCYGIGVSRLLSAIVEQHNDENGIAWPREIAPFDIHVVPVNVKNDT 483

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                +  T ML  AG +  +     +  G +   +D    P+ I  G      G+++IK
Sbjct: 484 QRELSEKVTAMLEDAGYQVLVDDRKERA-GVKFADSDLIGLPIRITVGKK-ADEGIVEIK 541

Query: 449 DLAKGKELSREIKNNESWREARVAQ 473
               G+++  +++   +  +    +
Sbjct: 542 LRQNGEKIEVKLEELLNSVKILFNE 566


>gi|296163127|ref|ZP_06845898.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295886629|gb|EFG66476.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 635

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +  ++   +R    + G+  I+TP++    SL +        
Sbjct: 255 MQDESP-GMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +    +               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-NHGLRSYRDLPLRYAEFGSCHRNESSGALH 370



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/349 (10%), Positives = 90/349 (25%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPRGWTLWQQVEQYMRRRVNDAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY I   N      +         D                   L G+ + +     D
Sbjct: 323 KRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F       SE I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEDQFISESIAFNTLAMSVYKDFGFDNVEIKLSLRPDARAGTDETWDRAEQGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
               +  +        G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 EALTACGVTWEELPGEGAFYGPKVEYHIRDALGRSWQCGTLQLDMVLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +       + P+ +  M+         Q   Q 
Sbjct: 502 SRRRPIMLHRAIVGSMERFLGILIEHHAGAMP-AWLAPMQVVVMNIAESQTEYAQSLAQS 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R E  L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGVRVEADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|187924732|ref|YP_001896374.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689588|sp|B2SZG2|SYT_BURPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187715926|gb|ACD17150.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 635

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +  ++   +R    + G+  I+TP++    SL +        
Sbjct: 255 MQDESP-GMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +    +               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-NHGLRSYRDLPLRYAEFGSCHRNESSGALH 370



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 39/118 (33%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    +  +   +        + R +  L    +       + P+ +  M+      
Sbjct: 493 GAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMP-AWLAPMQVVVMNIAESQA 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q   Q L+  G+R E  L  ++    +++       P  ++ G  ER    + ++
Sbjct: 552 EYAQSLAQSLQKQGVRVEADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|15611183|ref|NP_222834.1| threonyl-tRNA synthetase [Helicobacter pylori J99]
 gi|8928389|sp|Q9ZMV3|SYT_HELPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|4154621|gb|AAD05692.1| THREONYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 612

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+ L  + 
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKCDIFVEV-LDKND 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSQALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFGFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEYNHAE 480


>gi|225548175|ref|ZP_03769460.1| hypothetical protein RUMHYD_00154 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040614|gb|EEG50860.1| hypothetical protein RUMHYD_00154 [Blautia hydrogenotrophica DSM
           10507]
          Length = 464

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/229 (6%), Positives = 58/229 (25%), Gaps = 10/229 (4%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     ++      + V   +  ++     ++       +    +        
Sbjct: 237 EWFAYWKKFCLDWLSSLGLKEDEVRYRDHEKEELSFYSKATTDVEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI---VALKSLE 366
              + +   +       +     +    +      ++ A    +           L   +
Sbjct: 297 RTDYDLTQHQNVSGEDLTYFDDEKKQRYIPYVIEPSLGADRMVLAFLCSAYDEEVLDEEK 356

Query: 367 SS----TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +      +    + PV I  +              + L +     E       N G + +
Sbjct: 357 NDVRTVLHFHPVLAPVKIGVLPLSKKLNEGALKIYEQL-SKKYNCE--YDDRGNIGKRYR 413

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             D    P  +         G + ++D    +++  +I+  +++   + 
Sbjct: 414 RQDEIGTPFCVTYDFDSEEDGSVTVRDRDTMEQVRVKIEELDAYFADKF 462


>gi|251795037|ref|YP_003009768.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247542663|gb|ACS99681.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 637

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 74/246 (30%), Gaps = 11/246 (4%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             E+I  ++S +    +         +    A   G +EL   +E   K+  ++  +   
Sbjct: 395 IEEEIGKVMSLIGEVYKVFGFAYTVELSTRPADYMGSDELWDEAEQSLKNVLDAQGVNYR 454

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--- 349
                G  Y     +  +       +              ++D        +        
Sbjct: 455 INEGDGAFYGPKIDFHIVDALKRSWQCGTI--QLDFQMPEKFDLSYIGEDNKKQRPVVIH 512

Query: 350 -GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
                 + R +  L    S    I  + PV    +      L         L  AGIR E
Sbjct: 513 RAIYGSLDRFLGILIEHYSGAFPIW-LAPVQAKVIPVSEHELDYALQVKSQLIQAGIRVE 571

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +   S K  GN+++ +     P  ++ G  ER  G + ++   K  E    ++  E    
Sbjct: 572 VDARSEK-LGNKIRKSQLEKVPYMLVVGKNERLSGSVSVR---KRGEAEGSVQQLEEIAG 627

Query: 469 ARVAQI 474
           A V + 
Sbjct: 628 AIVEEF 633



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/257 (10%), Positives = 67/257 (26%), Gaps = 15/257 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + IR  + +  R +     ++ + TP +     + +     +     ++  
Sbjct: 264 GMPFYLPKGMAIRTALENFSRELLNRNDYEEVRTPFMMNKR-MWEQSGHWEHYKDNMY-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D    +L+             +        R+YR  PV   E     R         
Sbjct: 322 TKVDESEFALKPMNCPG-------HMLIFKNSLRSYRELPVRLAEFGQVHRHELSGALGG 374

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    DA + +      E +G       +     ++         +    +  + 
Sbjct: 375 MMRVRTFCQDDAHLFVRPDQIEEEIG------KVMSLIGEVYKVFGFAYTVELSTRPADY 428

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      D+ ++     +       R +       G  +    +D +         +   
Sbjct: 429 MGSDELWDEAEQSLKNVLDAQGVNYRINEGDGAFYGPKIDFHIVDALKRSWQCGTIQLDF 488

Query: 254 ELYELVKGTIAGEKGFN 270
           ++ E    +  GE    
Sbjct: 489 QMPEKFDLSYIGEDNKK 505


>gi|118095671|ref|XP_413774.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 903

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 45/156 (28%), Gaps = 18/156 (11%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G     K + V      +G    ++A+ +          + P  +  +     S   
Sbjct: 754 TYVGKDGDDKKRPVIIHRAVLGSVERMIAILAENYGGKWPFWLSPRQVMVVPVGPTSEEY 813

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q        AG  +++ L  S     +++ A        ++ G  E++   + ++    
Sbjct: 814 AQQVCSEFFEAGFMSDVDLDQSCTLNKKIRNAQLAQYNFILVVGEKEKANHAVNVR---- 869

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                                  I +S  +  +KK 
Sbjct: 870 --------------TRDNKVHGEISVSSAIEKLKKF 891



 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N + D IR  Y    F  + +P + ++  L +        ++ +FS + + 
Sbjct: 525 FLPRGAFLYNTLTDFIREEYHRRNFTEVVSPNI-FNSKLWETSGHWQHYSENMFSFEIEK 583

Query: 78  GQWISLRYDLTAPLARYVAEN 98
            +  +L+           A  
Sbjct: 584 -ETFALKPMNCPGHCLMFAHR 603


>gi|91784428|ref|YP_559634.1| threonyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123358618|sp|Q13WF7|SYT_BURXL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91688382|gb|ABE31582.1| Ser-tRNA(Thr) hydrolase [Burkholderia xenovorans LB400]
          Length = 635

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +  ++   +R    + G+  I+TP++    SL +        
Sbjct: 255 MQDESP-GMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +    +               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-NHGLRSYRDLPLRYAEFGSCHRNESSGALH 370



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/349 (10%), Positives = 89/349 (25%), Gaps = 8/349 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       + +     +
Sbjct: 266 HPRGWTLWQQVEQYMRRRVNDAGYLEIKT---PMIMDRSLWEASGHWQNYRENMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY I   N      +         D                   L G+ + +     D
Sbjct: 323 KRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F       SE I      +S+  +     +   +        G +E    +E   +
Sbjct: 382 DAHIFCTEDQFISESIAFNTLAMSVYKDFGFDHVEIKLSLRPDARAGTDETWDRAEQGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVS 339
               +  +        G  Y     Y          +    +  +      G  Y    +
Sbjct: 442 EALTACGVTWEELPGEGAFYGPKVEYHIKDALGRSWQCGTLQLDMVLPERLGAEYVAEDN 501

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
             +   +        + R +  L    +       + P+ +  M+         Q   Q 
Sbjct: 502 SRRRPIMLHRAIVGSMERFLGILIEHHAGAMP-AWLAPMQVVVMNIAESQTEYAQSLAQS 560

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           L+  G+R    L  ++    +++       P  ++ G  ER    + ++
Sbjct: 561 LQKQGVRVAADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|254819680|ref|ZP_05224681.1| prolyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 583

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 2/87 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L     +      V +   + D  + +        L   G+   +      + G + K
Sbjct: 473 DELGLRWPSSVAPFDVHLVIANKDDRARTGATELAGELDRLGVDVLLD-DRQASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKD 449
            A+    P  ++ G    + G+++++D
Sbjct: 532 DAELLGVPWIVVVG-RGWADGVVELRD 557



 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R   P G        +R+  RI   +R      G   I  P L      ++  ++    
Sbjct: 34  IRPVAP-GLYSWLPLGLRVLRRIEGIVREEMNAIGGQEILFPALLPRAPYEATNRWTEYG 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D      F L+D  G    L  
Sbjct: 93  DSV----FRLKDRRGSDYLLGP 110


>gi|227890630|ref|ZP_04008435.1| prolyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867568|gb|EEJ74989.1| prolyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300214372|gb|ADJ78788.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 571

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/248 (10%), Positives = 74/248 (29%), Gaps = 6/248 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+  +I + IR   +      +  P +  ++ L +     +     
Sbjct: 34  QITAGMYAYLPLAYRVMKKIENIIREEMDRIDAVEMLVPAVVPAE-LWQESGRYETYGPT 92

Query: 70  VFSLQDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +F L+D   +   L    + T   + R   +++  +       ++     N         
Sbjct: 93  LFKLKDRHERDFILGPTHEETFTTIVRDAIKSYKKLPLYLYQIQMKYRDENRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +             + +  ++        + +  +   D+   I +   + G   K    
Sbjct: 153 REFLMLDGYSFHVDDASMEKVFNDTDKAYQRIFERCGLDFRGIIADSGAMGGNRSKEFQA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +   + +    + D      +    L + +   +   D  K A   ++ I  +  FL 
Sbjct: 213 IAEVGEDTIAYSDSSDYAANIEMAKN-LRIPKQSHETPKDLEKVATPNAKTIVEVAEFLG 271

Query: 246 IDLEKSMH 253
            D +  + 
Sbjct: 272 TDTQNEIK 279



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 52/145 (35%), Gaps = 8/145 (5%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSD 388
           D L    +   +    + IG+SRL+ A+          +    I      ++     +  
Sbjct: 425 DVLDENGRQVPMRMGCYGIGVSRLLSAIVEQHNDENGIAWPREIAPFDIHVVPVNVKNDT 484

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                +  T ML  AG +  +     +  G +   +D    P+ I  G      G+++IK
Sbjct: 485 QRELSEKVTAMLEDAGYQVLVDDRKERA-GVKFADSDLIGLPIRITVGKK-ADEGIVEIK 542

Query: 449 DLAKGKELSREIKNNESWREARVAQ 473
               G+++  +++   +  +    +
Sbjct: 543 LRQNGEKIEVKLEELLNSVKILFNE 567


>gi|225026720|ref|ZP_03715912.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353]
 gi|224955955|gb|EEG37164.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353]
          Length = 650

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 45/146 (30%), Gaps = 2/146 (1%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y       +   V          R +  L    +            +  +          
Sbjct: 504 YIDQNGDKQRPYVIHRTSMGCYERTLAWLIEKYAGKFPTWLCPE-QVRVLPISEKFADYA 562

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + L+  GI + +    S+  G +++ A  +  P  ++ G  E+  G + ++    G
Sbjct: 563 EEVNKELKRNGILSTVD-NRSEKIGYKIREARLQKLPYMLVVGAQEQETGKVSVRSRFAG 621

Query: 454 KELSREIKNNESWREARVAQITIPIS 479
            E  +++K+  S     +    I   
Sbjct: 622 DEGQKDLKDFISAICEEIRTKEIRQE 647



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 5/116 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K  +I   +   I ++ +N +G+   +TPL+  SD   K     D   +G+F 
Sbjct: 260 GLPLLLPKGAKIIQTLQRWIEDLEDNEWGYVRTKTPLMAKSDLY-KISGHWDHYKEGMFV 318

Query: 73  LQDD--DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           L D+  D + ++LR  +T P   Y  +N                        G   
Sbjct: 319 LGDEENDKEVLALRP-MTCPFQYYCYKNTQKSYRDLPYRMSETSTLFRNEDSGEMH 373


>gi|91205350|ref|YP_537705.1| threonyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122990926|sp|Q1RJ48|SYT_RICBR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91068894|gb|ABE04616.1| Threonyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 635

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/382 (9%), Positives = 96/382 (25%), Gaps = 10/382 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV-----DNVGSSAETADAEMCMMMA 152
           +F         +                R+  +          +   +    +       
Sbjct: 254 HFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVDKSLWELSGHWEKFR 313

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D + A+        +   N      I ++      D                   L G+ 
Sbjct: 314 DDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +T E +        +  +    ++            G +E 
Sbjct: 373 MRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEVRAGSSET 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E   K          +     G  Y     +  +        +   +    V    
Sbjct: 433 WDKAENALKEAVEKAGYSYTLNPGEGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLPER 491

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                V+    +  P       +G     + +   E +      + PV +      SD  
Sbjct: 492 LDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWLAPVQVAIATITSDLN 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L  +G+R ++ +   K    +++    +  P+  + G  E+    + I+ L
Sbjct: 552 DYALEVQKALIESGVRVDINISPDK-INYKIREFSNQKVPMIAVIGKQEKENKQVTIRRL 610

Query: 451 AKGKELSREIKNNESWREARVA 472
              ++    I+    +     +
Sbjct: 611 GTTEQEVLSIEQLIEYIREENS 632



 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   + N I   IR      G+  ++TP+L    SL +     ++    +F+L
Sbjct: 261 GMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVDK-SLWELSGHWEKFRDDMFAL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 ET-DDKTLALKPMNCP 334


>gi|303244124|ref|ZP_07330462.1| glycyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485509|gb|EFL48435.1| glycyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 576

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 2/102 (1%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  V +  + +              LR  GI AE     S   G +    D    P
Sbjct: 477 PQVAPIKVGVFPLVNKEGMAEIAMRIKDNLRKNGIIAE--YDDSGAIGRRYMRMDEVGTP 534

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             I         G + I+     +++  +I    ++ +  + 
Sbjct: 535 FCITVDGRTLEDGTITIRYRDTREQIRIKIDEVINYIKNNIK 576


>gi|300924761|ref|ZP_07140703.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300419049|gb|EFK02360.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1]
          Length = 642

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSDYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVQSGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 371


>gi|229544430|ref|ZP_04433488.1| prolyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229324915|gb|EEN90592.1| prolyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 569

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 86/251 (34%), Gaps = 12/251 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         ++ ++I   IR   E  G   +  P L+ ++ L +           
Sbjct: 34  QIASGVYTYLPLAKKVLHKIEAIIREELEAIGSMELLMPSLQPAE-LWQESGRWYSYGPD 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF- 125
           +  L+D   +  +L     ++   L R   +++  +      Y+I   FR+EK       
Sbjct: 93  LMRLKDRHERDFALGPTHEEVITSLIRNEVKSYKRLP--LSLYQIQTKFRDEKRPRFGLL 150

Query: 126 --RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
             R+FI  D  +  ++ E+ D     M           + D+   + +   + G   +  
Sbjct: 151 RGREFIMKDAYSFHANKESLDETYKDMYRAYTNIFSRCKLDFRAVLADSGAIGGKDTQEF 210

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE-QIDIMVS 242
           +   +   + +    + D      +  VK +  +   D +    +      +  I  +  
Sbjct: 211 MVLSEIGEDTIAYSDSSDYAANIEMAEVKTVYTKP--DEAEKPLEKIPTPGQRTIAQIAD 268

Query: 243 FLSIDLEKSMH 253
           FL  D EK + 
Sbjct: 269 FLKADPEKCLK 279



 Score = 41.0 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 36/106 (33%), Gaps = 3/106 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              N+      L+     D+   +  +     L        M   + +  G +   +D  
Sbjct: 464 WPVNLAPFDVHLVPVNMKDAQQSALAESLHAELEKQ-FTVLMDDRNER-PGVKFADSDLI 521

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             P+ +  G    + G++++K    G+ L  + ++        +AQ
Sbjct: 522 GLPVRVTVGKK-AAEGIVEVKIRKTGEVLEVKKEDLAETISNILAQ 566


>gi|116514446|ref|YP_813352.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|116093761|gb|ABJ58914.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|325126146|gb|ADY85476.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 643

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 1/140 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   +       
Sbjct: 499 SYIGADGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNLDAHSDY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L   G RAE+    ++  G +++ +  +  P  ++ G  E + G + ++    
Sbjct: 559 AKKVRDELVAKGFRAEIDF-RNEKLGYKIRESQTQKVPYTLVLGDDEMNAGTVNVRPYGT 617

Query: 453 GKELSREIKNNESWREARVA 472
            ++ S  +          VA
Sbjct: 618 EEQNSESLAEFMDKLSKDVA 637



 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 51/186 (27%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+  + TP+L   D+  K         + +F  
Sbjct: 259 GLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLDAY-KTSGHWAHYREDMFPP 317

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 318 MDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 377

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A    ++ D      I    + +   + K  D       + 
Sbjct: 378 MTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDYYFRLSYRDPKNTDKYFANDEMW 437

Query: 186 GDDKLN 191
              +  
Sbjct: 438 ERSQSM 443


>gi|291521022|emb|CBK79315.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus
           catus GD/7]
          Length = 585

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/238 (10%), Positives = 62/238 (26%), Gaps = 9/238 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   I   + + I+      G+  + TP +   +   K     D   + +F 
Sbjct: 201 RGLPMFLPKGYTIWQELENYIKEKERKLGYQHVMTPCVGTVNLY-KTSGHWDHYKENMFP 259

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + D +   LR             +         +YR  P+   E     R+       
Sbjct: 260 AMEVDDEAFVLRPMNCP-------HHMMIYANKRHSYRDLPIRIGEIAHDFRYEASGTL- 311

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                      +     +  + ++    +  D          +      + L   +   +
Sbjct: 312 KGIERGRHFCQNDAHLFVTPEQIKDEISRVVDLIFSTYEDFGITDYRCVLSLRDPEDKAK 371

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                   +K +    + +  L  E   +       G  L       + + +++   +
Sbjct: 372 YHDDDEMWNKAENALREVMNELGLEYTEEIGEAAFYGPKLDVNVKPAVGNEITLSTCQ 429



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/359 (9%), Positives = 95/359 (26%), Gaps = 16/359 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-------GSSAETADAEMCMMMA 152
             +      ++    +  EK     ++  +   V  V              +    M + 
Sbjct: 205 MFLPKGYTIWQELENYIKEKERKLGYQHVMTPCVGTVNLYKTSGHWDHYKENMFPAMEVD 264

Query: 153 DTLEAVGIKRNDYHIGINN--RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQG 210
           D    +      +H+ I    R     +  +IG    D   E    L+ I++   F    
Sbjct: 265 DEAFVLRPMNCPHHMMIYANKRHSYRDLPIRIGEIAHDFRYEASGTLKGIERGRHFCQND 324

Query: 211 VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN 270
             L +   +  +          ++ +   +  +  +   +   +  +         K  N
Sbjct: 325 AHLFVTPEQIKDEISRVVDLIFSTYEDFGITDYRCVLSLRDPEDKAKYHDDDEMWNKAEN 384

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
            L  +   +      +  I  ++     L+          +                +  
Sbjct: 385 ALREVMNELGLE--YTEEIGEAAFYGPKLDVNVKPAVGNEITLSTCQLDFCLPAKFQLTY 442

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
               D          +           +   L+  + +         V +  +  D D L
Sbjct: 443 V---DKDGEMKTPVVLHRAILGSLDRFMAYILEETKGNLPTWLAPIQVKVMPVKTDDDDL 499

Query: 391 -SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +      ++L    +R ++    ++  G +++    +  P  ++ G  E+    +  +
Sbjct: 500 NAYANEICELLEAQNVRVDLD-DRAEKLGYRMREGQIQKVPYLLVIGFNEKDNRTVSYR 557


>gi|289578137|ref|YP_003476764.1| glycyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527850|gb|ADD02202.1| glycyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 462

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/253 (11%), Positives = 64/253 (25%), Gaps = 24/253 (9%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +F+    E    EL    K     E          + + + G     ++        L 
Sbjct: 212 GNFIFRTREFEQMELEFFCKPGEDMEWFNYWRKYCMDWLLEFGLKKENLRFRDHKKEELS 271

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----------YDGLVSRFKGQNVPATG 350
           +Y+    +    FP    +   +   +     +          Y   V+  K        
Sbjct: 272 HYSTATTDIEYNFPFGWGELWGIANRTDFDLRQHMEHSGVDLSYMDPVTGEKYIPYCIEP 331

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLI-----------TTMDHDSDSLSKYQMYTQM 399
                  ++  L               V++             +                
Sbjct: 332 SVGVDRLMLAFLIDAYEEEELEDGETRVVLRLHPALAPIKAAVLPLSKKLSENAYKLYDQ 391

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR    +  +    + + G + +  D    P  I       +   + I+D    +++  +
Sbjct: 392 LRN---KFVVDYDETGSIGKRYRRQDEIGTPFCITYDFDSENDHCVTIRDRDTMEQVRVK 448

Query: 460 IKNNESWREARVA 472
           I+  E + E R+ 
Sbjct: 449 IEEVEKYLEERLN 461


>gi|213965838|ref|ZP_03394030.1| glycyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951597|gb|EEB62987.1| glycyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 460

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 28/97 (28%), Gaps = 3/97 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  +          +     LR     A +   +S   G + +  D    P  +
Sbjct: 363 SPVKVAVLPLSKKDTLTPTAEAVADKLRQ--YWA-VDYDTSGAIGRRYRRQDEIGTPFCV 419

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                      + ++D    ++   +I   E +  AR
Sbjct: 420 TVDFDTLEDNAVTVRDRDTMEQERVKIDELEGYLAAR 456


>gi|220906778|ref|YP_002482089.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782895|sp|B8HNJ7|SYP_CYAP4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219863389|gb|ACL43728.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 613

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 65/253 (25%), Gaps = 20/253 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P ++ ++ L +     D   K    
Sbjct: 37  SGVYAYLPLMWRVLGKVSQIVRQEMNAAGAQECLLPQIQPAE-LWQESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRI------GPVFRNEKH 120
           +F+L D   + + L     ++   +AR +   +  +       +        P F   + 
Sbjct: 96  MFALTDRQDRQLGLGPTHEEVITTIARDLIRTYRQLPQNLYQIQTKFRDEIRPRFGLMRG 155

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                +     D D                       +  +  D   G          + 
Sbjct: 156 REFIMKDAYSFDADVESLRVAYGKMHQAYCNILQRCGLKYRAVDADSGAIGGSGSQEFMV 215

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                 D+       VL   D      ++    L  +        F K     ++ ID +
Sbjct: 216 LADAGEDE-------VLYTEDGRYAANVEKAISLPVDAEPSGLTKFEKRETPGTDTIDKL 268

Query: 241 VSFLSIDLEKSMH 253
             FL     + + 
Sbjct: 269 CQFLKCSPTQVVK 281



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 44/125 (35%), Gaps = 20/125 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +++    +++  +       Q L  AGI   +   + +  G + K AD 
Sbjct: 505 IWPVAIAPYQAIVVIPNLNETTQVEAATQLYQDLNAAGIETLLDDRNERA-GVKFKDADL 563

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I+ G    ++G +++                   + A  +   I + +++ T+K
Sbjct: 564 IGIPYRIVTGRS-LAQGKVEV------------------VQRASRSSTEIALDQVIPTLK 604

Query: 487 KILQE 491
           + +  
Sbjct: 605 EWIAA 609


>gi|149179156|ref|ZP_01857725.1| prolyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148842016|gb|EDL56410.1| prolyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 584

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 1/82 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     ++I     D + +   + Y   L+ AG+       +++  G + K AD 
Sbjct: 466 IWPLSIAPYEVLVIPLNVKDDEVMQTAERYYNELKAAGVDVLFDDRNAR-PGVKFKDADL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIK 448
              P  ++ G     +G ++ K
Sbjct: 525 IGIPYRVVIGGKGLQKGEIETK 546


>gi|103486185|ref|YP_615746.1| threonyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|123380057|sp|Q1GVA9|SYT_SPHAL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|98976262|gb|ABF52413.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Sphingopyxis
           alaskensis RB2256]
          Length = 667

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/473 (10%), Positives = 129/473 (27%), Gaps = 87/473 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R   +  G+  ++TP +  +    +      +  + +F +
Sbjct: 271 GSVFWHPNGFVVWRELEAYMRRAIDAAGYREVKTPQVMDARQ-WEQSGHWGKYRENMFVI 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D+                                    P   +E        +++    
Sbjct: 330 PDE-----------------------------------VPNTEDEGPIVSDDAEWMA--- 351

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +      A   +      +   + ++   Y  G  +R    G L  +      +  + 
Sbjct: 352 --LKPMNCPAHVLIFRQGMKSYRDLPLRL--YENGCCHRNEPHGALHGLMRV--RQFTQD 405

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +      ++    L      D    +     L  E+     S    D  +   
Sbjct: 406 DAHIFCREDQIVEEVRNFCALADRIYKDFGFTYAIKLALRPEK--RFGSDAMWDKSEDEL 463

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
               +  G    + G+ EL        +  + + +++   T   G  +  G +    +  
Sbjct: 464 RNAVIEAGLATEQYGWEEL------PGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLP 517

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             ++                      R +   +    F      + + ++          
Sbjct: 518 DRLDASYIGED-------------GERHRPVMLHRAIFGSYERFIGILIEHFVGRFPTWL 564

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                ++ T+  D+D  +K    T  L  AGIR E  L  ++    +++       P  +
Sbjct: 565 APVQAVVATIVSDADDYAKA--ATARLVAAGIRTESDL-RNEKINYKVREHSLAKVPHLL 621

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           + G  E   G + I+ L                   +  Q  +P++E ++ +K
Sbjct: 622 VVGKREAEEGTVAIRTL------------------GQDGQRIMPLAEAIAMLK 656


>gi|332526531|ref|ZP_08402643.1| prolyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332110799|gb|EGJ10976.1| prolyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 582

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 35/104 (33%), Gaps = 4/104 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G  +     +R+  ++   IR      G   +  P+++ ++ L          
Sbjct: 31  MIKRLGAGIYNYMPMGLRVIRKVEAIIREEMNRAGAVELLMPVVQPAE-LWMETGRFQAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
              +  ++D   +   ++    ++   +AR    ++  +     
Sbjct: 90  GPELLRVKDRHDRDFVIQPTSEEVITDIARQELRSYKQLPRTFY 133



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 43/167 (25%), Gaps = 24/167 (14%)

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVA---LKSLESSTNNIKEMGPVLITTMDHD 386
            G  Y     + +   +   G  +                    +      V +  + +D
Sbjct: 435 MGATYLDENGKPQPFEMGCYGIGVTRILGAAIEQNHDERGIIWPDAIAPFTVAVCPIGYD 494

Query: 387 --SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
             +D  +        L   GI   +     +  G      +    P  ++        G 
Sbjct: 495 RSADVKAAADQLHDELAALGIDVVLD-DRGERPGAMFADWELIGVPHRVVVSDRGLKAGT 553

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +++                        A  T+P++E V+ VK  L+ 
Sbjct: 554 VEV------------------QGRRETAAHTVPLAEAVAFVKGRLKA 582


>gi|291542490|emb|CBL15600.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus
           bromii L2-63]
          Length = 648

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +     ++   Q     L + G+R  +     +N G ++K A     P  ++ G  
Sbjct: 552 QIRLLPIKEGNVEYAQGIADRLTSLGMRVTVD-SRDENIGPKIKAARLERIPYILVIGDN 610

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           E +   + ++   +G+  +  +    +  +  V    
Sbjct: 611 EMNSSTVTVRSRKRGEIPNMPVDEFVALVKNEVDTKE 647



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+   +   + ++ ++ G    +TPLL   D   K     D    G+F L
Sbjct: 263 GLPILLPKGARVVQLLQRWVEDVEQSKGCLLTKTPLLAKRDLY-KISGHWDHYLDGMFVL 321

Query: 74  QDDDGQW---ISLRYDLTAPL 91
            D   +     +LR  +T P 
Sbjct: 322 GDPHDEEKECFALRP-MTCPF 341


>gi|302783999|ref|XP_002973772.1| hypothetical protein SELMODRAFT_442211 [Selaginella moellendorffii]
 gi|300158810|gb|EFJ25432.1| hypothetical protein SELMODRAFT_442211 [Selaginella moellendorffii]
          Length = 795

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 2/90 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      L   +     LR   IRAE+  G        ++ A+ +  PL  
Sbjct: 522 WIAPVQARLLPVTDTELPYCKQVLARLREKDIRAEIACGER--LSKLIRNAEVQKIPLMA 579

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           + G  E     L ++    G+  +  +   
Sbjct: 580 VVGPKEVEAQTLTVRTRHGGELGTLSVDER 609



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR+ I D  + ++   G++ + TP +  ++ L K     D   + +F  
Sbjct: 279 GLVFWHPKGALIRHLIEDYWKKVHLRRGYELLYTPHVAKAE-LWKTSGHLDFYKENMFEQ 337

Query: 74  QDDDGQWISLRYDLTA 89
              + ++  LR     
Sbjct: 338 IKIEEEFYQLRPMNCP 353


>gi|227872012|ref|ZP_03990397.1| threonine--tRNA ligase [Oribacterium sinus F0268]
 gi|227842155|gb|EEJ52400.1| threonine--tRNA ligase [Oribacterium sinus F0268]
          Length = 627

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 78/273 (28%), Gaps = 9/273 (3%)

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIM---VSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
            E R D+   F   + + +E  DI+                EL       +   + ++  
Sbjct: 359 QEFRQDDDHTFVMESQIEAEIADIISIADEVYKTFGVTYRAELSTRPDDFMGDIEVWDRA 418

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               + +    Y     +I+               +  LG        +         G 
Sbjct: 419 EAALKKILTDKYGEGGFEINEGDGAFYGPKIDLQIKDALGREWQCGTIQLDFQLPHNFGL 478

Query: 333 RYDGL-VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
            Y     S      +    +      + + +++ + S         V I  +  + +   
Sbjct: 479 TYQTAEGSTAMPVVIHRAIYGSLERFIGIIIENFKGSFPFWLSPEQVGIVPIREEHNDYG 538

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
           K     + L   GIRAE+   S KN   ++K       P  ++ G  E     + I ++ 
Sbjct: 539 K--KIYEALSDMGIRAEIDY-SDKNMKEKIKTYKNYKNPYILVLGDKEMEEKAVSI-NMR 594

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVST 484
              +    +  +   +     Q    + EL+  
Sbjct: 595 GSNKQINNVPLDAFLKACERMQKEHSL-ELMDE 626


>gi|212534744|ref|XP_002147528.1| threonyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210069927|gb|EEA24017.1| threonyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 724

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/439 (10%), Positives = 103/439 (23%), Gaps = 66/439 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +I N +   +R+ Y   G+  ++TP + Y  S+ K        +  +F L
Sbjct: 320 GCPFLLPNGTKIFNALQKLLRSEYRKRGYQEVQTPNM-YDVSIWKTSGHWAHYSDDMFKL 378

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D + +  +L+             +F       R+YR  P+   +     R         
Sbjct: 379 -DVEKREWALKPMNCPG-------HFMLFGHRERSYRELPLRIADFGVLHRNEASGALSG 430

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                  +  D  +          +    +              +  K+    +  + E 
Sbjct: 431 LTRVRKFQQDDTHIFCTAEQISSEIEGLFDFLKSIYGLFGFTFKL--KLSTRPEKYMGEL 488

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                A D+L        +  L +   D+                             ++
Sbjct: 489 EAWNYAEDQL--------RQALNKFMGDDW---------------------------EIN 513

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E      G        + L    +           I                 ++     
Sbjct: 514 EGDGAFYGPKIDITIADALKREFQCATIQLDYQAPI----------------NFKLEYIT 557

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                   P          +   +          A   S      I+           I 
Sbjct: 558 NEKQASADPKANNDGAEKAKETNVNRARPVVIHRAIIGSFERFLGILIEHFAGKWPFWIS 617

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               +++  M   +D   + Q     L    +  ++ +  +     +++           
Sbjct: 618 PRQILIVPVMPALNDYAKELQQI---LLADKLNVDVDVSGN-TLQKKIRTGQLAQYNFIF 673

Query: 434 IQGTGERSRGMLQIKDLAK 452
           + G  ER    + I++   
Sbjct: 674 VVGAQERDSRSVNIRNRDD 692


>gi|299783724|gb|ADJ41722.1| Threonyl-tRNA synthase [Lactobacillus fermentum CECT 5716]
          Length = 601

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 42/131 (32%), Gaps = 1/131 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G   +     +   G    + R +  L  +             +      D      
Sbjct: 457 HYVGEDGKQHRPIMIHRGVVGTMERFVAYLTEIYKGAFPTWLAPNQVNIIPVSDEKHGDY 516

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                +  R A +R  +   S K  G +++ +  +  P  ++ G  E + G + ++   +
Sbjct: 517 ADDLAREFRAAQLRTVVDHRSEK-MGYKIRESQTQKVPYTLVVGEDEVANGTVSVRKYGE 575

Query: 453 GKELSREIKNN 463
             ++S   ++ 
Sbjct: 576 KDQVSMSKQDF 586



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 56/186 (30%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   + +     G++ + TP+L   ++  K     D   + +F  
Sbjct: 217 GLPYWMPKGSTIRRTIERYVIDKEVGDGYEHVYTPVLMNLNAY-KTSGHWDHYREDMFPP 275

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 276 MDMGDGELLELRPMNCPSHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALSGLQRVRE 335

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A++  ++ D  +   I    + +   + K  +       + 
Sbjct: 336 MTLNDGHTFVALDQIQDEFAKILKLIMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMW 395

Query: 186 GDDKLN 191
              +  
Sbjct: 396 ERSQSM 401


>gi|323526736|ref|YP_004228889.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383738|gb|ADX55829.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 635

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 39/120 (32%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQDESP-GMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +    +               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-NHGLRSYRDLPLRYAEFGSCHRNESSGALH 370



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 39/118 (33%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    +  +   +        + R +  L    +       + P+ +  M+      
Sbjct: 493 GAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMP-AWLAPMQVVVMNIAESQA 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q   Q L+  G+R E  L  ++    +++       P  ++ G  ER    + ++
Sbjct: 552 EYAQSLAQTLQKQGVRVEADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|224023751|ref|ZP_03642117.1| hypothetical protein BACCOPRO_00467 [Bacteroides coprophilus DSM
           18228]
 gi|224016973|gb|EEF74985.1| hypothetical protein BACCOPRO_00467 [Bacteroides coprophilus DSM
           18228]
          Length = 285

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/127 (11%), Positives = 44/127 (34%), Gaps = 3/127 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++              V I  +    +  + +    
Sbjct: 148 NQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPDQVAILPVSEKYNEYADHVRL- 206

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+   IRA +    ++  G +++  + +  P  +I G  E     + ++   +G + +
Sbjct: 207 -ELKKNDIRAIVD-DRNEKIGRKIRDNEMKRIPYMLIVGEKEAENEEVSVRKQGEGDQGT 264

Query: 458 REIKNNE 464
            +I++  
Sbjct: 265 MKIEDFA 271


>gi|126277226|ref|XP_001373323.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 806

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 44/148 (29%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y    S  K + V      +G    ++A+ S          + P  +  +         
Sbjct: 657 TYVSKDSDDKTRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPCQVMVIPVGPTCEEY 716

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               ++    AG  A++ L  S     +++ A        ++ G  E+    + ++    
Sbjct: 717 ALQISKEFFEAGFMADVDLDQSCTLNKKIRNAQLAQYNFILVVGEKEKLNNAVNVRTRDN 776

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  + +  S  +      T+   E
Sbjct: 777 KIHGEASVVSTISKLKKLKESRTLNAEE 804



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 87/317 (27%), Gaps = 16/317 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D I+  Y    F  + +P + Y+  L +        ++ +FS  D +
Sbjct: 428 FLPRGAFIYNTLMDFIKEEYHRRNFTEVISPNV-YNSKLWETSGHWQHYSENMFSF-DIE 485

Query: 78  GQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGR-----FRQFIQC 131
            +  +L+           A    +    P R    G + RNE  G         R     
Sbjct: 486 KETFALKPMNCPGHCLMFAHRPRSWREMPIRLADFGVLHRNELSGTLSGLTRVRRFQQDD 545

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                       + + C+    ++  V       ++       L  I  +I    +++L 
Sbjct: 546 AHIFCRMEQIEEEMKGCLEFLQSVYTVFGFSFQLNLSTRPENFLGEI--EIWNQAEEQLQ 603

Query: 192 ERL------IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             L        L   D         +K+    GR            L        VS  S
Sbjct: 604 NSLKEFGKPWKLNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDS 663

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            D  + +     ++          +E          S      I +  T        +  
Sbjct: 664 DDKTRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPCQVMVIPVGPTCEEYALQISKE 723

Query: 306 VYEAILGFPVMNEKQKP 322
            +EA     V  ++   
Sbjct: 724 FFEAGFMADVDLDQSCT 740


>gi|39996615|ref|NP_952566.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|73919793|sp|Q74D04|SYT_GEOSL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|39983496|gb|AAR34889.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 636

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    +         + LRT G+R +     ++  G +++ A  +  P  +
Sbjct: 536 WLSPVQAIVLTVTDNQQPYAAQVFETLRTNGVRVQKDF-RNEKLGFKIREAQLQKIPYML 594

Query: 434 IQGTGERSRGMLQ 446
           + G  E   G + 
Sbjct: 595 VIGDKEVESGTVT 607


>gi|330960837|gb|EGH61097.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 192

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 4/124 (3%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-ARYV 95
           +   G +    P L   D+  +     +     +++  D  G+   L  + TA    R  
Sbjct: 11  FIEAGAEEAIVPALWGQDTFIEKAGGSEIIG-QMWAFNDKAGRACCLIPEATALFQERSE 69

Query: 96  AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL 155
                        + +   +R E+   GR+R+F Q  ++ +G S + A      +    L
Sbjct: 70  I--LLNGRSEALFFYVARCYRYERPQAGRYREFTQLGLEILGPSPQRALQRSQAICTGFL 127

Query: 156 EAVG 159
           +++G
Sbjct: 128 DSLG 131


>gi|302788105|ref|XP_002975822.1| hypothetical protein SELMODRAFT_267898 [Selaginella moellendorffii]
 gi|300156823|gb|EFJ23451.1| hypothetical protein SELMODRAFT_267898 [Selaginella moellendorffii]
          Length = 420

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 2/99 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      L   +     LR   IRAE+  G        ++ A+ +  PL  
Sbjct: 319 WIAPVQARLLPVTDTELPYCKQVLARLREKDIRAEIACGER--LSKLIRNAEVQKIPLMA 376

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E     L ++    G+  +  +       E  VA
Sbjct: 377 VVGPKEVEAQTLTVRTRHGGELGTLSVDEVIDRIETAVA 415



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR+ I D  + ++   G++ + TP +  ++ L K     D   + +F  
Sbjct: 50  GLVFWHPKGALIRHLIEDYWKKVHLRRGYELLYTPHIAKAE-LWKRSGHLDFYKENMFEQ 108

Query: 74  QDDDGQWISLRYDLTA 89
              + ++  LR     
Sbjct: 109 IKIEEEFYQLRPMNCP 124


>gi|195937403|ref|ZP_03082785.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|261227789|ref|ZP_05942070.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258046|ref|ZP_05950579.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|320641567|gb|EFX10955.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320646926|gb|EFX15759.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320668281|gb|EFX35108.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
          Length = 622

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 574 LVCGDKEVESGKIAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 621



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH 351


>gi|194364305|ref|YP_002026915.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|226701341|sp|B4SJ64|SYP_STRM5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194347109|gb|ACF50232.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 567

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 41/162 (25%), Gaps = 12/162 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G    + P ++  + L +      + 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVERIVREEMDRAGAVEFQIPTIQPKE-LWEQTGRWQKF 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTA-----PLARYVAENFDTIV----FPCRTYRIGPVFRN 117
              +  ++D   Q        TA       AR    ++  +          +R     R 
Sbjct: 90  GPQLLKIKDRKDQTFCYSP--TAEEAACDFARSELSSYKQLPVNFYQIQTKFRDEIRPRF 147

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  F                     M    +     +G
Sbjct: 148 GVMRSREFLMKDAYSFHLHDECLVREYENMKSAYSRIFTRLG 189



 Score = 43.3 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 21/194 (10%), Positives = 47/194 (24%), Gaps = 9/194 (4%)

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
            +    +  +  +     +R +      +    L      E       G          +
Sbjct: 369 HLAGVNWGRDLAEPEVADIRNVRAGDRALDGGELKIARGIEVGHVFQLGRTYARALDATV 428

Query: 338 VSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMD--HDSDS 389
           +       V A G        +VA               +      V++  ++   D+  
Sbjct: 429 LDENGKAAVMAMGCYGIGISRVVAAAIEQNHDDAGIIWPDAMAPWQVVVCVINPKGDAAV 488

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
                   Q LR AG+ A +        G      +    P  ++      + G  + + 
Sbjct: 489 ADAATNLLQELRDAGLDAALD-DRGLRPGAMFADMELIGIPHRVVVSERGLAAGTYEYRS 547

Query: 450 LAKGKELSREIKNN 463
               +  S +    
Sbjct: 548 RRASEAESLDKATL 561


>gi|332686097|ref|YP_004455871.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370106|dbj|BAK21062.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 647

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 9/107 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +   + G+  + TP++   D   K        ++ +F 
Sbjct: 262 SGLPFWLPKGATIRRTIERYITDKEISLGYQHVYTPIMANVDLY-KTSGHWAHYHEDMFP 320

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
             D   G+ + LR             +         +YR  P+   E
Sbjct: 321 PMDMGDGEMLVLRPMNCP-------HHMMVYKDTVHSYRELPIRIAE 360


>gi|319935875|ref|ZP_08010301.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319809142|gb|EFW05623.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 581

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 53/159 (33%), Gaps = 20/159 (12%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D    + +   V    F      + + ++    +         V +  +  +   L   Q
Sbjct: 442 DQNGEKVRPVMVHRVIFGSIERFIGILIEHFAGAFPLWLAPAQVKVIPV-KNEYHLDYSQ 500

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              ++L   GIR E+     K  G +++ A  +  P  ++ G  ER    +  +    G+
Sbjct: 501 EIFKLLEAKGIRVEIDDREEK-LGYRIREAQMKKIPYQLVLGDKERDERTVTYR--QYGE 557

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           +                 Q T+ + E +  + K +++  
Sbjct: 558 QK----------------QTTVSLDEFICMILKQIEDKA 580



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS- 72
           G        + +RN +     + +   G++ I+TP++   + L +         + +++ 
Sbjct: 205 GMPFFLPHGMLLRNELEKFWYDEHTKEGYEFIKTPIMMSKE-LWEVSGHWYNYKENMYTS 263

Query: 73  LQDDDGQWISLRYDLTAP 90
           L D   +  +++      
Sbjct: 264 LVD--EREFAIKPMNCPG 279


>gi|315658159|ref|ZP_07911031.1| glycyl-tRNA synthetase beta subunit [Staphylococcus lugdunensis
           M23590]
 gi|315496488|gb|EFU84811.1| glycyl-tRNA synthetase beta subunit [Staphylococcus lugdunensis
           M23590]
          Length = 475

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/219 (8%), Positives = 51/219 (23%), Gaps = 4/219 (1%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  + +  +    +  +                   K            +   ++     
Sbjct: 260 QWLKDLNISEENMRLRDHDEDELSHYSN-ATTDIEYKFPFGWGELWGIASRTDFDLKQHS 318

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               E  K     +      Y    S    +   A          +   K   +  +   
Sbjct: 319 EHSGEDFKYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDQEGVEGSKDARTVLHFHP 378

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P     +        +     + L +   +  +    S++ G + +  D    P  I
Sbjct: 379 ALAPYKAAVLPLSKKLSGEAIKIFEDLSS---KFAIDFDESQSIGKRYRRQDEIGTPYCI 435

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + ++D     ++   I   E++   +V 
Sbjct: 436 TFDFDSLEDNQVTVRDRDSMDQVRMPIAELEAFLTEKVK 474


>gi|312139482|ref|YP_004006818.1| threonine-tRNA ligase thrs [Rhodococcus equi 103S]
 gi|311888821|emb|CBH48133.1| threonine-tRNA ligase ThrS [Rhodococcus equi 103S]
          Length = 683

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 43/112 (38%), Gaps = 5/112 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +              + L+ AG+RAE+ +   +    +++    +  P  +
Sbjct: 570 WLAPVQVVGIPVAEAFEDHLFDVVKQLKAAGVRAEVDVSDDR-MQKKIRNHTTQKVPFML 628

Query: 434 IQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQIT--IPISELV 482
           + G  +   G +  +    G +++   + +      A + +     P +ELV
Sbjct: 629 LAGERDVEAGAVSFR-FRDGTQVNGVPVADAVETIVAWIGRRENASPTAELV 679


>gi|239944683|ref|ZP_04696620.1| prolyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239991146|ref|ZP_04711810.1| prolyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291448145|ref|ZP_06587535.1| prolyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
 gi|291351092|gb|EFE77996.1| prolyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
          Length = 567

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 53/134 (39%), Gaps = 5/134 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
           + D L  + K   V    + IG+SR + AL      +      +E+ P  +  +      
Sbjct: 425 QLDVLGQQGKPVRVTMGSYGIGVSRAVAALTEQTADDKGLCWPREIAPADVHVVAAGKAL 484

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++     ++ L  AG+R  +   +  + G +   ++    P  ++ G    + G+L++K
Sbjct: 485 QTELALDVSEKLNAAGLRVLVDDRAGVSPGVKFTDSELIGVPKILVAGRRS-ADGVLELK 543

Query: 449 DLAKGKELSREIKN 462
           D   G+     +  
Sbjct: 544 DRRTGEREELTVDE 557



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 21/68 (30%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ + I + +R   +  G   +  P L   +         +     +F L+D  
Sbjct: 46  WLPLGKKVLDNISNVVREEMDAIGAQEVLLPALLPKEPYEAS-GRWEEYGDLLFRLKDRK 104

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 105 GGDYLLGP 112


>gi|169351009|ref|ZP_02867947.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552]
 gi|169292071|gb|EDS74204.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552]
          Length = 606

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 58/161 (36%), Gaps = 21/161 (13%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    + +   +    F      + + ++              V +  ++ +   L   
Sbjct: 467 IDDKGEKARPVMLHRVIFGSIERFIGILIEHFAGVFPLWLAPVQVKVLPVN-NEYHLEYA 525

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +  T++L+ AG++ EM     K  G +++       P  ++ G  ER    +  +     
Sbjct: 526 KEVTKLLQEAGLKVEMDAREEK-LGYRIREGQMEKVPYLLVLGNNERDEKTVTYR----- 579

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
                        +  +  QIT+P  E VS +KK + ENKE
Sbjct: 580 -------------QHGQQKQITVPFDEFVSMLKKEI-ENKE 606



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +RN +       +   G+  I+TP++   + L +           +++ 
Sbjct: 231 GMPIFLPKGMILRNTLEQFWYEEHTKEGYVFIKTPIMMSRE-LWETSGHWANYKDDMYTS 289

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 290 M-VDDREFAIKPMNCPG 305


>gi|289550664|ref|YP_003471568.1| Glycyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180196|gb|ADC87441.1| Glycyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 463

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/219 (8%), Positives = 51/219 (23%), Gaps = 4/219 (1%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  + +  +    +  +                   K            +   ++     
Sbjct: 248 QWLKDLNISEENMRLRDHDEDELSHYSN-ATTDIEYKFPFGWGELWGIASRTDFDLKQHS 306

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
               E  K     +      Y    S    +   A          +   K   +  +   
Sbjct: 307 EHSGEDFKYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDQEGVEGSKDARTVLHFHP 366

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P     +        +     + L +   +  +    S++ G + +  D    P  I
Sbjct: 367 ALAPYKAAVLPLSKKLSGEAIKIFEDLSS---KFAIDFDESQSIGKRYRRQDEIGTPYCI 423

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + ++D     ++   I   E++   +V 
Sbjct: 424 TFDFDSLEDNQVTVRDRDSMDQVRMPIAELEAFLTEKVK 462


>gi|88608761|ref|YP_506256.1| prolyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|114152220|sp|Q2GE40|SYP_NEOSM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88600930|gb|ABD46398.1| prolyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 436

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 58/455 (12%), Positives = 118/455 (25%), Gaps = 68/455 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++   I   IR   ++ G   +  P ++ +    +     D   K +   
Sbjct: 42  GLYSWLPLGLKVLRNIESVIRQELDSMGMHEMLMPCIQLAKLWEESGRYSD-YGKELLKF 100

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D     +       ++   + R    ++  +      Y I   FR+E        +  +
Sbjct: 101 KDRHDNELLFGPTNEEVITAIVRDDLASYKQLPK--ILYHIQWKFRDEIRPRFGLMRARE 158

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
             + +  S                        +     I+  K+    L         +L
Sbjct: 159 FLMKDAYSFD---------------------VDQQSARISYNKVYQSYLRIF-----KRL 192

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
               I  RA   +    L        E     +           E  +++  F  ID   
Sbjct: 193 GLNPIPCRANAGVIGGSLN------HEFHITTTEGGEGKIFYPEEMGELVDEFCKIDPSN 246

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
                           +   EL   +E    SG  ++               T    E  
Sbjct: 247 EH--------AVSVMTEKLQELFCFTEECNSSGIGNDN-----------RICTAQGIEVG 287

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
             F    +   P+     G  G+         G  +     +I            +    
Sbjct: 288 HIFLFGEKYSAPMQARFSGRDGKKKNFYMGSYGIGISRLLAAIIEVHSD------DKGII 341

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
             + + P  I  ++   +S    +     L      + ++  ++ + G +    D    P
Sbjct: 342 WPESIAPFKIGLINLHGESCGFAEEIFSKL-----DSVIYDDTADSQGVKFARMDLIGVP 396

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             II G      G +++K     K  SR +    S
Sbjct: 397 FQIIVGKNGPIHGTIELKYRLDSKRESRSLNELVS 431


>gi|254294721|ref|YP_003060744.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254043252|gb|ACT60047.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 654

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 83/275 (30%), Gaps = 24/275 (8%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           ++ E     R        G+  V+ +      D++  F +   + +E +  +  F  +  
Sbjct: 368 RMAEFGCCHRNEPHGALHGIMRVRQM----TQDDAHIFCREDQVANETLRFLNLFKRVYG 423

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +  + ++   +        G +E    +E    +  N   ++       G  Y     + 
Sbjct: 424 DFGLDQISYKLATRPEQRAGNDETWDQAEGALATALNEAGLEFDYAEGEGAFYGPKLEFH 483

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLV-----SRFKGQNVPATGFSIGISRLIVALK 363
                    +              R D         + +   +    F      + + ++
Sbjct: 484 LTDAIGRTWQCGTL--QLDYVLPERLDATYVGEDGEKHRPVMLHRAVFGTFERFMGILIE 541

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFG---- 418
           +   +         V I T+   +D+ ++       LR  GIR E+ L   K N+     
Sbjct: 542 NYAGAFPMWLAPTQVAIATITPKADAYAE--KVAARLRAKGIRVELDLRHEKINYKVREH 599

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           + +K       P+  + G  E     L ++    G
Sbjct: 600 SHMK------VPVIAVIGMNEAEEEKLALRRFGAG 628



 Score = 43.3 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 14/165 (8%), Positives = 43/165 (26%), Gaps = 14/165 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I  ++   IR   ++ G+  ++TP L  +    +      +  + +F +
Sbjct: 262 GSVFWHPNGFMIWRQLEAYIRRRQDDDGYVEVKTPQL-LNSVFWEQSGHWSKFRENMFVV 320

Query: 74  QDD-------------DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D+             +G+ ++L+        +   +   +                 + 
Sbjct: 321 PDEIPSVEEEGPVLSGEGELMALKPMNCPAHVQIFKQGTRSYRDLPLRMAEFGCCHRNEP 380

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                       +    +     + ++       L        D+
Sbjct: 381 HGALHGIMRVRQMTQDDAHIFCREDQVANETLRFLNLFKRVYGDF 425


>gi|238753686|ref|ZP_04615048.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238708238|gb|EEQ00594.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 642

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/348 (13%), Positives = 94/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +EL   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDELWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWIAPVQVVVMNITDSQAEYVQEVTKKLQDAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K     R   + Q+ 
Sbjct: 594 LVCGDKEIETGKVAVRTRRGKDLGSLDVNVVVDKLLTEIRSRSLHQLE 641



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 53/203 (26%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHVFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA D L     +
Sbjct: 425 EKRIGSDELWTRAEDDLAAALTE 447


>gi|227499759|ref|ZP_03929859.1| proline--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227218145|gb|EEI83411.1| proline--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 572

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++ N+I   +R   E+Y    + T +L+  +   +     +     +F 
Sbjct: 37  SGVYSFLPLGKKVVNKIEAIVREAMEDYDSIEVSTSILQTREI-WEASGRWETFGPEMFK 95

Query: 73  LQDDDGQWISLRY 85
           ++D   +   L  
Sbjct: 96  IKDRHDREYCLGP 108


>gi|227503501|ref|ZP_03933550.1| threonyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227076004|gb|EEI13967.1| threonyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 687

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 9/114 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    D +   +     LR  GIRA++     +    +++       P  +
Sbjct: 574 WLAPHQVMGIPVADDFVPHLEGVAAKLRRKGIRADVDTSDDR-MQKKIRNHTTGKVPFML 632

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELV 482
           + G  +   G +  + L  G +     +   ++   +W   R  +   P  EL+
Sbjct: 633 VAGARDVEAGAVSFRFL-DGTQVNGVPVDEAVELISTWVAERTNEQ--PTEELI 683



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            GF         +R  + +  RN +   G+  + TP +   D   +     D  + G+F
Sbjct: 285 SGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVNTPHITKGDLF-RKSGHLDFYSDGMF 342


>gi|159112161|ref|XP_001706310.1| Glycyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157434405|gb|EDO78636.1| Glycyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 621

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 81/294 (27%), Gaps = 28/294 (9%)

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD---------NSGDFTKGANL 232
              H   +L          D L   G   +  +      D                    
Sbjct: 314 FRQHLPKQLAHYARDCWDCDCLLSCGWTEIVGIADRSAYDLQVHSKASGVDLTCFLKYPE 373

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             E    + +    +  K   +   L++ TI   +G  +L V+   ++ +G  + RI   
Sbjct: 374 PREVSYNICTLKMKECAKVFKQDVNLIRSTIEAIQG-EDLEVLKAELQSTGSYTLRIPGK 432

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQ---KPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                          +      +++ +      +      G   Y  L   F  +N+   
Sbjct: 433 DGEAEKDFEILPNYVQFNCDTKMLHGESIVPHVIEPSFGVGRILYSILEHSFYTRNIDEQ 492

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                    +V  K++              +  +  + D LS      + LR +GI A+ 
Sbjct: 493 RTVFRFKPYLVGCKAI--------------VLPLQRNDDLLSTSSHVLERLRRSGIAAKQ 538

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               +   G +   AD    P A+         G + I++     ++    K  
Sbjct: 539 DATGAP-IGRRYARADEIGIPFAVTIDFQTLEDGSVTIRERDSMDQIRVGSKQL 591


>gi|209521097|ref|ZP_03269827.1| prolyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209498480|gb|EDZ98605.1| prolyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 578

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGGIELLMPAVQPAE-LWQESGRWEKYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRKQADFVMGPTHEEVVTDIARNQIKSYRQLPVNFYQIQTK 138



 Score = 40.2 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 30/130 (23%), Gaps = 17/130 (13%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M +D       +       L  AGI   +     +  G  
Sbjct: 463 DEKGIIWPESIAPFEVVLCPMGYDRSDAVREQADKLYAELVAAGIDVILD-DRGERPGVM 521

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               +    P  ++ G      G +         E         +      A  T+    
Sbjct: 522 FADWELIGVPHRLVIGDRGLKDGKI---------EYQGRRDTEATLLPVEDAAQTV---- 568

Query: 481 LVSTVKKILQ 490
            +  V+  L 
Sbjct: 569 -IDKVRAALA 577


>gi|162452628|ref|YP_001614995.1| hypothetical protein sce4352 [Sorangium cellulosum 'So ce 56']
 gi|161163210|emb|CAN94515.1| thrS [Sorangium cellulosum 'So ce 56']
          Length = 753

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 6/118 (5%)

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L+    +           + T+          +  TQ LR  GIRA     SS+  G +
Sbjct: 640 LLEHHAGALPAWLSPEQARVVTVS--DKHNDHAEQVTQALRAHGIRASFV-RSSEKLGAK 696

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           ++ A     P  ++ G  E       ++ L  G    R     E+  E    Q  IP+
Sbjct: 697 IREAQVEKIPHMLVIGDKEVEAKGATVR-LRDGS--DRGFMKTEALAEFLREQCAIPV 751



 Score = 41.0 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   +R  I D  R ++   G+D + +P +  +D L K     D   +G+FS    D
Sbjct: 380 WLPKGGLLRTIIEDQWRKMHLEEGYDIVYSPHIAKAD-LWKTSGHWDFYREGMFSPMSVD 438

Query: 78  GQWISLRYDLTA 89
           G     +     
Sbjct: 439 GHDYCCKPMNCP 450


>gi|156934293|ref|YP_001438208.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532547|gb|ABU77373.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894]
          Length = 453

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 89/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 108 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 167

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 168 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIRMVYDMYSTFGFEK 226

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I        G  Y     +       
Sbjct: 227 IVVKLSTRPEKRIGTDEMWDRAEADLAVALEENNIPFEYQPGEGAFYGPKIEFTLYDCLD 286

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 287 RAWQCG-TVQLDFSLPSRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 345

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 346 TWLAPVQVVVMNITDSQSEYVNELTRKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 404

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++ +     +  +
Sbjct: 405 LVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 443



 Score = 41.0 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/205 (7%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 67  MQEEAP-GMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 124

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 125 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 183

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 184 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------RMVYDMYSTFGFEKIVVKLSTRP 235

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 236 EKRIGTDEMWDRAEADLAVALEENN 260


>gi|119494491|ref|XP_001264141.1| threonyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119412303|gb|EAW22244.1| threonyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 530

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          + NR++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 84  GSPLFLPNGTHVINRLISFLRTQYLQYGFREVLTPTI-YKRSLWEVSGHWQNYKDDMYEV 142

Query: 74  QDDD-----------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +               +   L+          + ++N      P R     P+ RNE  G
Sbjct: 143 KGRGATGEADGETGEDESYGLKPMNCPGHCLLFKSQNHSYRELPIRYADFSPLHRNEISG 202


>gi|239833532|ref|ZP_04681860.1| tRNA synthetase class II [Ochrobactrum intermedium LMG 3301]
 gi|239821595|gb|EEQ93164.1| tRNA synthetase class II [Ochrobactrum intermedium LMG 3301]
          Length = 380

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
           IL S+R   +    + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 13  ILSSLRAALDAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 70

Query: 89  APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            P+ R   E       P R   +G VFR  + G   F
Sbjct: 71  IPVCRNHIE--LNAATPKRYAYLGEVFRQRRDGAAEF 105


>gi|206972654|ref|ZP_03233595.1| prolyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206732411|gb|EDZ49592.1| prolyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 566

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|134301672|ref|YP_001121640.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166223343|sp|A4IX68|SYT_FRATW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|134049449|gb|ABO46520.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 634

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 54/449 (12%), Positives = 114/449 (25%), Gaps = 91/449 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI  ++ D +R     YG   I TPL+       K        +K     
Sbjct: 260 GIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSG----HASK----- 310

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                 AEN                 ++E              V
Sbjct: 311 ---------------------YAENM-------------FATKSENRDFAIRPMNCPTCV 336

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       M    +          H  +  R                +    
Sbjct: 337 QVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVI 396

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG     + +     +  GD                       +++  
Sbjct: 397 LMVQQCFEVYKDFGFNDFAIKIALRPENRIGD-----------------------DETWD 433

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL+                 +   I R  +  T  +       
Sbjct: 434 KSEQMLKNALDANNVSYELLPGEG---AFYGPKIEFHLKDAIGRSWQCGTIQL------- 483

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D    +     +           + + ++    +     
Sbjct: 484 --------DFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLW- 534

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M   ++     +    ML   GIRA++ L  ++  G +++       P  +
Sbjct: 535 -LAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDL-RNEKIGFKIREHTLLRVPYLV 592

Query: 434 IQGTGERSRGMLQIKDLAKGK---ELSRE 459
           I G  E+ + ++ I+    G+   ++S +
Sbjct: 593 ILGKNEQEQKIITIRK-HSGEDLGQMSVD 620


>gi|145529349|ref|XP_001450463.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418074|emb|CAK83066.1| unnamed protein product [Paramecium tetraurelia]
          Length = 930

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/494 (10%), Positives = 125/494 (25%), Gaps = 54/494 (10%)

Query: 3   KKTKLRA--ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           KK  L    +L  G A        I N +++ +R  Y   G+  + +P + ++  L K  
Sbjct: 335 KKQNLYLFHQLSPGSAFFYPSGAHIYNTLMNFLRRQYYIRGYQEVISPNI-FNAQLWKIS 393

Query: 61  PDEDRPNKGVFSLQDDDGQ-WISLRY------------------DLTAPLARYVAENFDT 101
              D+  + +F   +   +    L+                   DL    A +   + + 
Sbjct: 394 GHYDKYKENLF-FINMGEEGEYGLKPMNCPGHCLMFDMIQHSYRDLPVRFADFGVLHRNE 452

Query: 102 IVFPCR-TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
           +        R+    +++ H   R  Q  +     +   +                    
Sbjct: 453 VHGALSGLTRVRRFQQDDAHIFCRMDQIQEEIKSCLDFLSYIYSLFGFEFKLYLSTRPEK 512

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK--------------- 205
                 +  N    L+  L+K G   +    +       ID                   
Sbjct: 513 FLGTKEVWDNAEYQLEQGLKKFGKPFEVNPGDGAFYGPKIDVKLYDAYKREHQCGTIQLD 572

Query: 206 ---FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                   ++    E   +   D  +  N   +    ++  +      S  +        
Sbjct: 573 FNLPERFNLQYRASEDVQEVQQDKEQLHNEQVQAAQEIIDVVRKASHHSDTDNITTAPQN 632

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              +   + +   +   +       + +      +  + +        +     ++    
Sbjct: 633 SQQQPAEDPVQEKAPQEQNVKKQKKQKQQKEPQQQQQDQHKKQKLPEDIIESGSSQGLSQ 692

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV---L 379
                V    +Y+      K            I   +  + ++ +     K    +    
Sbjct: 693 HELHKVLHEKKYELGYHHLKAGFARPVIVHRAILGSLERMIAVLTEQCGGKWPFWLSPKQ 752

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRA---EMFLGSSKNFG-NQLKYADRRNCPLAIIQ 435
           +      +      +     LR  G      E     +K     Q++Y          + 
Sbjct: 753 LVLCPVSAYYKDVAEKIAARLRLEGYTVTTDEADQTLAKKVRNAQIQY-----FNFVGVI 807

Query: 436 GTGERSRGMLQIKD 449
           G  E   G++ ++D
Sbjct: 808 GEEEVKAGVIDVRD 821


>gi|45387545|ref|NP_991118.1| probable prolyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|41350986|gb|AAH65673.1| Prolyl-tRNA synthetase (mitochondrial) [Danio rerio]
          Length = 477

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +    P G        +R   +++  I       G   ++ P L  ++ L K  
Sbjct: 75  MVQTGLIHPSNP-GCFYYLPVALRSLEKLVRLIDEEMHAIGGQKVDMPALCSAE-LWKKS 132

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              +   K +F L D       L  
Sbjct: 133 GRWELMGKEMFRLLDRHNGEYCLGP 157


>gi|54020620|ref|YP_116116.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987793|gb|AAV27994.1| threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 579

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/250 (10%), Positives = 74/250 (29%), Gaps = 10/250 (4%)

Query: 225 DFTKGANLTSEQID--IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           + +    + SE +D   +  F     ++      +  +     ++   +L    E  + +
Sbjct: 336 EISHLFQMISEVLDFFKVQIFYISFSKRDPKNKDKFFQDDQMWDQAEADLKQFLEQNKIN 395

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
                +I  ++     +++         L    +           +     ++   +   
Sbjct: 396 --YIEKIGEAAFYGPKIDFQVKTALNKELTISTLQLDFLLPKKFKISFINEHNKKETPIL 453

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
                     IG     +AL   +S  N    + P  I  +          Q   ++L  
Sbjct: 454 IH-----RGLIGTYERFIALLLEQSKGNLPFWISPKQIIVIPVAEKHNDFAQKIHKILFD 508

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            G  +E+ L S +    +++ A+       +I G  E ++  +  +     +     + +
Sbjct: 509 LGFNSEIDLRSER-ISRKIREANLEKINFQVIIGDEEITKNEITYRKFGSPELFRISLVD 567

Query: 463 NESWREARVA 472
                ++   
Sbjct: 568 FVDLLKSSEK 577


>gi|197284912|ref|YP_002150784.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227355315|ref|ZP_03839716.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|238693141|sp|B4ETK6|SYT_PROMH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194682399|emb|CAR42252.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227164539|gb|EEI49410.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 642

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/381 (11%), Positives = 98/381 (25%), Gaps = 10/381 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +          +         +       +  + D   V                     
Sbjct: 255 HMQEEAPGMAFWHNDGWTIFRELETFVRCKLKEYDYQEVKGPFMMDRVLWEKTGHWENYK 314

Query: 158 VGIKRNDYHIGINNRKILDG-----ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
             +            K ++      I ++      D                   L G+ 
Sbjct: 315 ENMFTTSSENREYCIKPMNCPGHVQIFKQGLRSYRDLPLRMAEFGSCHRNEPSGALHGL- 373

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     + SE  + +     +       ++   +        G + L
Sbjct: 374 MRVRGFTQDDAHIFCTEEQILSEVNNCIKLIYDVYSTFGFEKIVVKLSTRPEKRIGEDAL 433

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
             I+E         N I+       G  Y     +          +    V       G 
Sbjct: 434 WDIAETDLAKALTDNNIEFEYQPGEGAFYGPKIEFTLYDCLDRAWQCG-TVQLDFSLPGR 492

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                V+    + VP       +G     + + + E +      + P  +  M+      
Sbjct: 493 LGASYVAENNERKVPVMLHRAVLGSLERFIGILTEEYAGFFPTWLAPQQVVVMNITDGQA 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              Q   + L+ AGIRA+  L  ++  G +++    R  P  ++ G  E   G + ++  
Sbjct: 553 DYVQKLVKELQDAGIRAKADL-RNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTR 611

Query: 451 AKGKELSREIKNNESWREARV 471
                 S ++ + +      +
Sbjct: 612 RGKDLGSIDVNDFKEKLLQEI 632



 Score = 37.9 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/149 (6%), Positives = 38/149 (25%), Gaps = 3/149 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G A        I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMAFWHNDGWTIFRELETFVRCKLKEYDYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KENMFT-TSSENREYCIKPMNCPGHVQIFKQGLRSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTL 155
                      +     + ++   + + +
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQILSEVNNCI 401


>gi|147835149|emb|CAN65674.1| hypothetical protein VITISV_002009 [Vitis vinifera]
          Length = 1260

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ I DS + I+  + +D + TP +  +D L K     D   + ++S 
Sbjct: 302 GLVFWHPKGAIVRHIIEDSWKKIHIEHXYDLLYTPHVARAD-LWKTSGHLDFYRENMYSQ 360

Query: 74  QDDDGQWISLRYDLTA 89
              + +   LR     
Sbjct: 361 ITIEDELYQLRPMNCP 376



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +      L      T  L+  GIRAE+  G        ++ ++++  PL  + G  E  
Sbjct: 568 VLPVTDTQLEYCNEVTNKLKANGIRAEVCHGER--LPKLIRNSEKQRIPLMAVVGPKEVE 625

Query: 442 RGMLQ 446
              + 
Sbjct: 626 TQTVT 630


>gi|153002179|ref|YP_001367860.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS185]
 gi|151366797|gb|ABS09797.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS185]
          Length = 398

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 9  AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
           + P G          +   I + IR +Y   GF+ + TP+    + L +     D   +
Sbjct: 18 PQAP-GMIFWHPNGWALFRDIQEHIRRVYRRNGFEEVNTPVFMKKE-LWQTSGHMDMFAE 75

Query: 69 GVF 71
           +F
Sbjct: 76 NMF 78



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/99 (9%), Positives = 31/99 (31%), Gaps = 1/99 (1%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +     +  +    +    +     +R  + +  + +   ++K   ++  P 
Sbjct: 296 PDWLHPVPVAIASVNESNSQFVRQLATLCLARDMRVLVDISQN-SVARKMKRFHKQKVPY 354

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +  G  E +   + +K    G      +     +   +
Sbjct: 355 ILTVGDKEEAEKCVSVKCRKDGVMTHIPLAELADYLADK 393


>gi|67475342|ref|XP_653365.1| threonyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56470308|gb|EAL47979.1| threonyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 676

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 3/126 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        +  + L            V++ T+             T+ L  AG  
Sbjct: 551 HRAVLGSIERFTAILTEHLAGKWPFWLSPRQVMVCTVS--EKYNEYGAKVTKELNDAGFY 608

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A++    +K    +++ A        ++ G  E     + ++      E   E K     
Sbjct: 609 ADLDDSDNK-LPKKIRNAQVAQYNFILVIGEEELVSNSVNVRTRENKVEGKVEFKEFIKH 667

Query: 467 REARVA 472
            +   A
Sbjct: 668 LKQLEA 673



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 3/108 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N++++ +R+ Y   G+  + TP + +  +L +           +FS +  +
Sbjct: 304 WLPHGTRIYNKLVELMRSEYRVLGYQEVITPNI-FLSTLWETSGHWQHYKDDMFSFE-CE 361

Query: 78  GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            Q  +L+          + ++       P R    G + RNE  G   
Sbjct: 362 KQTFALKPMNCPGHCVMFASKKRSYRELPLRYAEFGVLHRNELTGALH 409


>gi|300814791|ref|ZP_07095034.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511099|gb|EFK38356.1| threonine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 636

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + IRN +L   +N+ +  G+  I TP++   D   +     D   + ++  
Sbjct: 260 GFPFFHPNGMIIRNNLLSWWKNVLQERGYGEILTPVILNEDLWHRS-GHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
            + D +  +++      
Sbjct: 318 TEIDEEGYAVKPMNCPG 334



 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 41/102 (40%), Gaps = 7/102 (6%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                L+ AGIR ++    ++  G +++ A  +     +
Sbjct: 533 WLSPVQVEIIPVSEKFKPYAGEVFDQLKKAGIRVKID-ERAEKVGYKIREAQLKKVNYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGK-----ELSREIKNNESWREAR 470
           + G  E +   L ++    G+     E+S+ I++ +   + +
Sbjct: 592 VIGEKETASHKLSVRK-RSGEEVKDVEVSKFIEDLKEEIKTK 632


>gi|104774352|ref|YP_619332.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423433|emb|CAI98306.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 643

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 39/131 (29%), Gaps = 1/131 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   +       
Sbjct: 499 SYIGADGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNLDAHSDY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L   G RAE+    ++  G +++ +  +  P  ++ G  E + G + ++    
Sbjct: 559 AKKVRDELVAKGFRAEIDF-RNEKLGYKIRESQTQKVPYTLVLGDDEMNAGTVNVRPYGT 617

Query: 453 GKELSREIKNN 463
            ++ S  +   
Sbjct: 618 EEQNSESLAEF 628



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 51/186 (27%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+  + TP+L   D+  K         + +F  
Sbjct: 259 GLPYWMPKGATIRRIIERYIVDKEVAAGYQHVYTPVLMNLDAY-KTSGHWAHYREDMFPP 317

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 318 MDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 377

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A    ++ D      I    + +   + K  D       + 
Sbjct: 378 MTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDYYFRLSYRDPKNTDKYFANDEMW 437

Query: 186 GDDKLN 191
              +  
Sbjct: 438 ERSQSM 443


>gi|305681315|ref|ZP_07404122.1| proline--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659520|gb|EFM49020.1| proline--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 666

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 13/88 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R   +I   +R   +N G   +  P L   E  +   ++    D     +
Sbjct: 122 GVYTWLPLGLRTLRKIEKVVREEMDNIGAQELLFPALLSREPYEQTRRWTEYGDN----L 177

Query: 71  FSLQDDDGQWISLRY---DLTAPLARYV 95
           F L+D  G  + L     ++    AR V
Sbjct: 178 FRLKDRKGNDMLLGPTHEEM---FARQV 202



 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 20/126 (15%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +         V +   + D  +L+        L   G+          + G + K ++
Sbjct: 561 GLNWPVEVAPYQVHVVVANKDKAALAAGDDIVAQLDATGVEVLFDDRPKVSPGVKFKDSE 620

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
               P  ++ G    S G+++++ +  G+                   + +P +++V TV
Sbjct: 621 LLGMPYIVVLGRS-FSNGIVELR-IRGGE------------------TLEVPAADIVDTV 660

Query: 486 KKILQE 491
            K++ +
Sbjct: 661 TKLIHK 666


>gi|190572717|ref|YP_001970562.1| prolyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|226701342|sp|B2FMR5|SYP_STRMK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|190010639|emb|CAQ44248.1| putative prolyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 567

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 41/162 (25%), Gaps = 12/162 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G    + P ++  + L +      + 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVERIVREEMDRAGAVEFQIPTIQPKE-LWEQTGRWQKF 89

Query: 67  NKGVFSLQDDDGQWISLRYDLTA-----PLARYVAENFDTIV----FPCRTYRIGPVFRN 117
              +  ++D   Q        TA       AR    ++  +          +R     R 
Sbjct: 90  GPQLLKIKDRKDQVFCYSP--TAEEAACDFARSELSSYKQLPVNFYQVQTKFRDEIRPRF 147

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  F                     M    +     +G
Sbjct: 148 GVMRSREFLMKDAYSFHLHDECLVREYENMKSAYSRIFTRLG 189


>gi|114799933|ref|YP_761871.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123027650|sp|Q0BXC2|SYT_HYPNA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114740107|gb|ABI78232.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 657

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 82/307 (26%), Gaps = 11/307 (3%)

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I +       D                   L G+ + + +   D++  F +   +  E +
Sbjct: 355 IFKNAQRSYRDLPIRMAEFGCCHRNEAHGALHGL-MRVRQMTQDDAHIFCREDQIADETL 413

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
             +  F ++  +  + E+   +        G +E    +E        +  +  S     
Sbjct: 414 RFLKLFETVYGDFGLSEISYKLATRPEMRAGTDETWDRAEKALADALTAAGMTFSIAEGE 473

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFS 352
           G  Y     +        +    +   F             Y G         +      
Sbjct: 474 GAFYGPKLEFHLT---DAIGRTWQCGTFQLDYVLPERLDAEYTGSDGAKHRPVMLHRAVF 530

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
               R +  L    + +  +  M PV +        +    +     LR AG+R E+   
Sbjct: 531 GTFERFMGILIENYAGSFPLW-MSPVQVVVAAITDAAGDYAEEAAAALRKAGLRVEVD-K 588

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            ++    +++    +  P+  + G  E     L ++ L    +    +            
Sbjct: 589 RNETINYKVREHSVQKVPVIAVVGAREAEDRKLALRRLGSNGQQIISLDEALVALADEAR 648

Query: 473 QITIPIS 479
              +  +
Sbjct: 649 APDLKRA 655



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/165 (9%), Positives = 42/165 (25%), Gaps = 14/165 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   IR   +  G+  ++TP L  +    +      +  + +F +
Sbjct: 263 GSVFWHPKGFMIWRELEAYIRRQQDADGYVEVKTPQL-LNSVFWEKSGHWSKFRENMFVV 321

Query: 74  QDD-------------DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            D+             +G+ ++L+        +       +                 + 
Sbjct: 322 PDEIPSTESDAPILSGEGELMALKPMNCPAHVQIFKNAQRSYRDLPIRMAEFGCCHRNEA 381

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                       +    +     + ++       L+       D+
Sbjct: 382 HGALHGLMRVRQMTQDDAHIFCREDQIADETLRFLKLFETVYGDF 426


>gi|109005002|ref|XP_001114166.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Macaca mulatta]
          Length = 475

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 58/205 (28%), Gaps = 15/205 (7%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 90  LLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPTLSPAE-LWQATNRWDLMGKELLRLRDRH 148

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   A+   +                ++  P         F 
Sbjct: 149 GKEYCLGPTHEEAITALIA---AQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFY 205

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D+   +A+     +C         +G++       + +         ++ +  
Sbjct: 206 MKDMYTFDSSPEAAQQTYNLVCDAYCSLFNRLGLRFVKVQADVGSIGGTMSHEFQLPVDV 265

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
            +              L+   L  +
Sbjct: 266 GEDRLAICPHCSFSANLETLDLSQM 290


>gi|301767961|ref|XP_002919352.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Ailuropoda
           melanoleuca]
          Length = 718

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/435 (11%), Positives = 109/435 (25%), Gaps = 78/435 (17%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +   +         
Sbjct: 324 FLPRGTRVYNTLVAFIRAEYTRRGFSEVKTPTL-FSAKLWELSGHWEHYQE--------- 373

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               +L+                            P        P         D   + 
Sbjct: 374 -DMFTLQP---------------------------PGSDRLASSPSDHPTSHPTDTLALK 405

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 406 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGSLGGLTRLRCF 454

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + E   
Sbjct: 455 QQDDAHIFCAPDQLEAEIR-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGEPCV 507

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 508 WDQAEQVLQRALEEFGEPWDLNPGDGAFYGPKIDVHLRDALGRPHQCGTIQLDFQLPLRF 567

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  + Q  V    V                 +           L V  +S         
Sbjct: 568 GLQYKGQAGVPERPVL----------------IHRAVLGSVERMLGVLAESCGGKWPLWL 611

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V++  +  + +     +   Q L+ AG+  ++          +++ A   +     
Sbjct: 612 SPFQVVVIPVGTEQE--EYAREVQQRLQAAGLVCDLDADLGLTLSRRVRRAQLTHYNFQF 669

Query: 434 IQGTGERSRGMLQIK 448
           + G  E+S+  + I+
Sbjct: 670 VVGQKEQSKRTVNIR 684


>gi|281352894|gb|EFB28478.1| hypothetical protein PANDA_008019 [Ailuropoda melanoleuca]
          Length = 718

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/435 (11%), Positives = 109/435 (25%), Gaps = 78/435 (17%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +   +         
Sbjct: 324 FLPRGTRVYNTLVAFIRAEYTRRGFSEVKTPTL-FSAKLWELSGHWEHYQE--------- 373

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               +L+                            P        P         D   + 
Sbjct: 374 -DMFTLQP---------------------------PGSDRLASSPSDHPTSHPTDTLALK 405

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 406 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGSLGGLTRLRCF 454

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + E   
Sbjct: 455 QQDDAHIFCAPDQLEAEIR-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGEPCV 507

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 508 WDQAEQVLQRALEEFGEPWDLNPGDGAFYGPKIDVHLRDALGRPHQCGTIQLDFQLPLRF 567

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +  + Q  V    V                 +           L V  +S         
Sbjct: 568 GLQYKGQAGVPERPVL----------------IHRAVLGSVERMLGVLAESCGGKWPLWL 611

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V++  +  + +     +   Q L+ AG+  ++          +++ A   +     
Sbjct: 612 SPFQVVVIPVGTEQE--EYAREVQQRLQAAGLVCDLDADLGLTLSRRVRRAQLTHYNFQF 669

Query: 434 IQGTGERSRGMLQIK 448
           + G  E+S+  + I+
Sbjct: 670 VVGQKEQSKRTVNIR 684


>gi|293556646|ref|ZP_06675211.1| prolyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291601181|gb|EFF31468.1| prolyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 569

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 72/249 (28%), Gaps = 16/249 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E  G   +  P +  ++ L +     +     ++  
Sbjct: 38  GIYSYLPLANRVLEKLKRIMREEFEKIGAVEMLMPAILPAE-LWEESGRYETYGPNLYRF 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG------R 124
           +D + + + L    + T   L R    ++  +      Y+I P +R+EK           
Sbjct: 97  KDRNDRKMILGPTHEETFTDLMRNEINSYKKLP--LNLYQIQPKYRDEKRPRFGLLRGRE 154

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           F             S +    +      +  +  G++              D        
Sbjct: 155 FIMKDAYSFHATEESLDETYKDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAIS 214

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +              L+      V     +   +   +  K A    + ID +  F 
Sbjct: 215 EIGEDTICYSTESDYAANLEMATSYYV----SKKSHETQLELEKVATPNVKSIDEVADFF 270

Query: 245 SIDLEKSMH 253
           S++ +K + 
Sbjct: 271 SVEPQKIIK 279


>gi|212531825|ref|XP_002146069.1| threonyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210071433|gb|EEA25522.1| threonyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 541

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 68/209 (32%), Gaps = 20/209 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 92  GSPLFLPNGTHIINKLIGFLRAQYRQYGFREVLTPNI-YKKSLWEISGHWQNYKDDMYEV 150

Query: 74  QDDD-----------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +               +   L+          + ++N      P R     P+ RNE  G
Sbjct: 151 RGRGATGETEGELGEDEQYGLKPMNCPGHCLLFKSQNHSYRDLPVRYADFSPLHRNEISG 210

Query: 122 P----GRFRQFIQCDVDNVGSSAET--ADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
                 R R+F Q D        +           +   ++  G+ + +  +     K  
Sbjct: 211 SLSGLTRVRRFHQDDGHIFCRPQQIGKEIDLALTFVNMVMKTFGLPKYNLVLSTRPEKDF 270

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLD 204
            G LE +    +++L + L       +L+
Sbjct: 271 IGSLE-LWDSAEEQLRQALDKSGLPWELN 298


>gi|218235963|ref|YP_002368620.1| prolyl-tRNA synthetase [Bacillus cereus B4264]
 gi|226731428|sp|B7HDU2|SYP_BACC4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218163920|gb|ACK63912.1| proline--tRNA ligase [Bacillus cereus B4264]
          Length = 566

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+     ++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVNVEELQTYIAN 563


>gi|228954095|ref|ZP_04116124.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229071317|ref|ZP_04204540.1| Prolyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711771|gb|EEL63723.1| Prolyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228805661|gb|EEM52251.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 566

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|229152018|ref|ZP_04280213.1| Prolyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228631367|gb|EEK88001.1| Prolyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 566

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+     ++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVNVEELQTYIAN 563


>gi|229162755|ref|ZP_04290712.1| Prolyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620637|gb|EEK77506.1| Prolyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 566

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DESGLVWPKAVAPFHVHVIPVNMKSDAQREMGESIYSSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|229047505|ref|ZP_04193095.1| Prolyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229081074|ref|ZP_04213584.1| Prolyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229111290|ref|ZP_04240843.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229191988|ref|ZP_04318958.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228591539|gb|EEK49388.1| Prolyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228672066|gb|EEL27357.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228702118|gb|EEL54594.1| Prolyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228723752|gb|EEL75107.1| Prolyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 566

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|323342132|ref|ZP_08082365.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464557|gb|EFY09750.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 596

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/380 (12%), Positives = 107/380 (28%), Gaps = 19/380 (5%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N  T+      Y      +             +   +  G      +     M   T++ 
Sbjct: 222 NGMTLRHALDEYYYNAHIKRGYVFTQTPTMLNKELWEVSGH----WENYRENMYTSTIDD 277

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
                   +         +G+     L    +L E   V R        GL  V+     
Sbjct: 278 REFAIKPMNCPGGMLVYKNGLHSYRDLPI--RLAEMGHVHRHEASGALNGLFRVRS---- 331

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F +   L  E ++I+     I     +    EL         G  ++   SE
Sbjct: 332 FTQDDAHLFMREDQLQDEIVEILDFINEIYSTFGLSYSIELSTRPEDKYIGDIDVWDRSE 391

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
              K    +  +        G  Y     ++       + +     V   +    R+D  
Sbjct: 392 QALKEACMAAGVDFKINEGDGAFYGPKLDFKVRDSLNRVWQ--CGTVQLDMNLPERFDLT 449

Query: 338 V-----SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                  + +   +    F      + + ++              + I  ++ +   +  
Sbjct: 450 YVAEDGKKKRPIMLHRAIFGSIERFIGILIEHFAGGFPLWMAPKQIEIIPVNTEF-HMDY 508

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                 +L   GIRA +  G ++  G +L+ A +   PL +I G  E     + ++   +
Sbjct: 509 ANEVCDLLLEKGIRAHVD-GRNEKLGYRLREAQKNKIPLQLIIGDQEIEDRSVNVRRYGE 567

Query: 453 GKELSREIKNNESWREARVA 472
             +   ++       E  ++
Sbjct: 568 RAQNPFDLDVFMQMVENEIS 587



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +R+ + +   N +   G+   +TP +   + L +     +   + +++ 
Sbjct: 215 GFPFWLPNGMTLRHALDEYYYNAHIKRGYVFTQTPTMLNKE-LWEVSGHWENYRENMYTS 273

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 274 TI-DDREFAIKPMNCPG 289


>gi|167747961|ref|ZP_02420088.1| hypothetical protein ANACAC_02693 [Anaerostipes caccae DSM 14662]
 gi|167652611|gb|EDR96740.1| hypothetical protein ANACAC_02693 [Anaerostipes caccae DSM 14662]
          Length = 463

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/228 (7%), Positives = 59/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     +      ++ + + +  ++     ++       +    +        
Sbjct: 238 EWFAYWKDFCINWLKTLGITDDQMRVRDHGKEELSFYSKATSDIEFLFPFGWGELWGIAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +       +     + +  +      ++ A   ++         + LE   
Sbjct: 298 RTDYDLTQHQNTSGEDLTYFDDEKKERYIPYVIEPSLGADRVTLAFLCAAYDEEELEGGD 357

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV I  +              + L       E       N G + +  
Sbjct: 358 KRTVLRFHPAIAPVKIGVLPLSKKLAEGAGKVYETL-AKYYNCE--YDERGNIGKRYRRQ 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + ++D    ++   +I++ + + E +  
Sbjct: 415 DEIGTPFCVTYDFDSEEDGAVTVRDRDTMEQERVKIEDLKEYFEKKFD 462


>gi|69246859|ref|ZP_00604151.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO]
 gi|257889274|ref|ZP_05668927.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|258615945|ref|ZP_05713715.1| prolyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260560114|ref|ZP_05832292.1| prolyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293560203|ref|ZP_06676705.1| prolyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|314937502|ref|ZP_07844835.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942161|ref|ZP_07849015.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314947499|ref|ZP_07850914.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951486|ref|ZP_07854535.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314992576|ref|ZP_07857994.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314995489|ref|ZP_07860589.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195040|gb|EAN09503.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO]
 gi|257825634|gb|EEV52260.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|260073949|gb|EEW62273.1| prolyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291605875|gb|EFF35307.1| prolyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590323|gb|EFR69168.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313592868|gb|EFR71713.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596326|gb|EFR75171.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313599084|gb|EFR77929.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313643143|gb|EFS07723.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313646049|gb|EFS10629.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 569

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 72/249 (28%), Gaps = 16/249 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E  G   +  P +  ++ L +     +     ++  
Sbjct: 38  GIYSYLPLANRVLEKLKRIMREEFEKIGAVEMLMPAILPAE-LWEESGRYETYGPNLYRF 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG------R 124
           +D + + + L    + T   L R    ++  +      Y+I P +R+EK           
Sbjct: 97  KDRNDRKMILGPTHEETFTDLMRNEINSYKKLP--LNLYQIQPKYRDEKRPRFGLLRGRE 154

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           F             S +    +      +  +  G++              D        
Sbjct: 155 FIMKDAYSFHATEESLDETYKDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAIS 214

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +              L+      V     +   +   +  K A    + ID +  F 
Sbjct: 215 EIGEDTICYSTESDYAANLEMATSYYV----SKKSHETQLELEKVATPNVKSIDEVADFF 270

Query: 245 SIDLEKSMH 253
           S++ +K + 
Sbjct: 271 SVEPQKIIK 279


>gi|257878529|ref|ZP_05658182.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257882947|ref|ZP_05662600.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257894712|ref|ZP_05674365.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|293567720|ref|ZP_06679062.1| prolyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294618726|ref|ZP_06698258.1| prolyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294620760|ref|ZP_06699967.1| prolyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|257812757|gb|EEV41515.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818605|gb|EEV45933.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257831091|gb|EEV57698.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|291589563|gb|EFF21369.1| prolyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291595039|gb|EFF26384.1| prolyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291599740|gb|EFF30750.1| prolyl-tRNA synthetase [Enterococcus faecium U0317]
          Length = 569

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 72/249 (28%), Gaps = 16/249 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E  G   +  P +  ++ L +     +     ++  
Sbjct: 38  GIYSYLPLANRVLEKLKRIMREEFEKIGAVEMLMPAILPAE-LWEESGRYETYGPNLYRF 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG------R 124
           +D + + + L    + T   L R    ++  +      Y+I P +R+EK           
Sbjct: 97  KDRNDRKMILGPTHEETFTDLMRNEINSYKKLP--LNLYQIQPKYRDEKRPRFGLLRGRE 154

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           F             S +    +      +  +  G++              D        
Sbjct: 155 FIMKDAYSFHATEESLDETYKDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAIS 214

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +              L+      V     +   +   +  K A    + ID +  F 
Sbjct: 215 EIGEDTICYSTESDYAANLEMATSYYV----SKKSHETQLELEKVATPNVKSIDEVADFF 270

Query: 245 SIDLEKSMH 253
           S++ +K + 
Sbjct: 271 SVEPQKIIK 279


>gi|227827828|ref|YP_002829608.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229585098|ref|YP_002843600.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|259511620|sp|C3N6D0|SYP_SULIA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511623|sp|C3MW88|SYP_SULIM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|227459624|gb|ACP38310.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228020148|gb|ACP55555.1| prolyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 481

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 77/256 (30%), Gaps = 28/256 (10%)

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           +  E + + +     ++   E + I + +  +      +       R         ++ I
Sbjct: 159 TFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAGALHTYAFDTI 218

Query: 311 LGFPVMNEKQKPVVFGSVGGGG---RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +    + +       G         +           +  + G S      ++A+   + 
Sbjct: 219 MPDGKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISDRAIASVIAIHGDDH 278

Query: 368 STNNIKEMGPVLITTMDHDSDS-------LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  + P+ +  +   + +       +       +ML    I       + K  G +
Sbjct: 279 GPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSVEICEMLNKNNITCVTDQDTEKTPGEK 338

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               + +  P+ +  G  E +   + IK                  R   +   T+   E
Sbjct: 339 FYIWEIKGVPIRLEIGPRELASSTVFIK------------------RRDNLKSYTVKKEE 380

Query: 481 LVSTVKKILQENKEEI 496
           +V+ VK++L E +E++
Sbjct: 381 VVNKVKEVLNEIQEDL 396



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 63/191 (32%), Gaps = 13/191 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         ++R  I+  IRN+ ++ G + +  PLL   D L +         + V
Sbjct: 32  PVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEV 91

Query: 71  FSLQDDDGQW-----ISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
           F      G       ++LR   T+ +A    EN     +     + Y+I  VFR E    
Sbjct: 92  F-WVTKGGSEDLDVKLALRP--TSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT 148

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILE 180
               +  +        +      +    + + +E      N+      ++ R   D    
Sbjct: 149 RPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAG 208

Query: 181 KIGLHGDDKLN 191
            +  +  D + 
Sbjct: 209 ALHTYAFDTIM 219


>gi|315230062|ref|YP_004070498.1| glycyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183090|gb|ADT83275.1| glycyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 570

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 20/48 (41%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       I+ +I   IR  ++  GF  +ETP +   +      
Sbjct: 30 RGFYDYGPLGATIKRKIERKIREAFQREGFFELETPDITPEEVFIASG 77



 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 31/119 (26%), Gaps = 20/119 (16%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  V +  +       +      + L+ AG  A          G +    D    P
Sbjct: 468 KDMAPIEVAVLPLVAKEPLTTIAYNVFRTLQKAGFIA--VYDEKDTIGRRYARYDEIGTP 525

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
             +           + I+D    +++                   + I EL   +K+++
Sbjct: 526 YCVTIDNQTPEDNTVTIRDRDTREQI------------------RVKIDELPEKLKELI 566


>gi|220905829|ref|YP_002481140.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219862440|gb|ACL42779.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 610

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              V + T+    D +   +   + ++  G+R
Sbjct: 483 HRAPFGSLERLIGILIEEYAGDFPLWLAPEQVRLLTVG--DDQMPFARQVAEQMQALGVR 540

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             +     +    +++ A++   P+  + G  E     L I+  A G+
Sbjct: 541 VVIDTSGDR-LPKKIRNAEKEKIPVMAVIGAKEVEADSLSIRTRAAGE 587



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ + D ++      G+ P+ +P +   D   K      +  + +F L
Sbjct: 224 GLPLWTPKGTILRSTLEDFLKQEQLKRGYQPVVSPHIARVDLF-KTSGHWQKYKEDMFPL 282

Query: 74  QDDDGQW 80
             +D Q 
Sbjct: 283 MSEDEQE 289


>gi|219849385|ref|YP_002463818.1| threonyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219543644|gb|ACL25382.1| threonyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 594

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +   +   Q L  AG+R E+     +    +++ A  +  P  +
Sbjct: 494 WLAPVQAVIIPITDKQMEYARKVRQRLFAAGLRVELDENRDR-MQGKIRRAQLQKIPYML 552

Query: 434 IQGTGERSRGMLQIK 448
           I G  E S   + ++
Sbjct: 553 IIGAREESADAVAVR 567


>gi|122879049|ref|YP_199448.6| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|162319805|ref|YP_449766.2| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188578630|ref|YP_001915559.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|114152279|sp|Q2P7I5|SYP_XANOM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152280|sp|Q5H4Q7|SYP_XANOR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701357|sp|B2SPG9|SYP_XANOP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188523082|gb|ACD61027.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 564

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   +  P ++  + L       ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMDRAGAVEVLFPTIQPRE-LWDATGRWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 90  GGQLLKIKDRKEQEFC 105


>gi|58425026|gb|AAW74063.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 595

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   +  P ++  + L       ++ 
Sbjct: 62  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMDRAGAVEVLFPTIQPRE-LWDATGRWEKF 120

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 121 GGQLLKIKDRKEQEFC 136


>gi|77457424|ref|YP_346929.1| prolyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|114152233|sp|Q3KH16|SYP_PSEPF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|77381427|gb|ABA72940.1| proline tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 571

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   +  P  + ++ L +     +  
Sbjct: 31  MIRKLASGLYTWLPMGLRVMRKVEAIVREEMDAAGSLEVLMPSTQPAE-LWQESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D  G+   
Sbjct: 90  GPELLRIKDRHGRDFC 105


>gi|84366334|dbj|BAE67492.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 583

 Score = 52.9 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   +  P ++  + L       ++ 
Sbjct: 50  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMDRAGAVEVLFPTIQPRE-LWDATGRWEKF 108

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 109 GGQLLKIKDRKEQEFC 124


>gi|296171596|ref|ZP_06852836.1| proline--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894051|gb|EFG73813.1| proline--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 582

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 2/87 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L     +      V +   + D+++ +        L   G+   +      + G + K
Sbjct: 473 DELGLRWPSSVAPFDVHLVIANKDAEARTGATGLATDLDRLGVEVLLD-DRQASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKD 449
            A+    P  ++ G    + G+++++D
Sbjct: 532 DAELLGVPWILVVG-RGWANGVVELRD 557



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R   P G        +R+  RI   +R   +  G   I  P L      ++  ++    
Sbjct: 34  IRPVAP-GLYSWLPLGLRVLRRIERIVREEMDAIGGQEILFPALLPRAPYETTNRWTEYG 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D    GVF L+D  G    L  
Sbjct: 93  D----GVFRLKDRRGNDYLLGP 110


>gi|295677048|ref|YP_003605572.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436891|gb|ADG16061.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 635

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +  ++   +R    + G+  I+TPL+    SL +        
Sbjct: 255 MQDESP-GMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPLIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +    +               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-NHGLRSYRDLPLRYAEFGSCHRNESSGALH 370



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 39/118 (33%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    +  +   +        + R +  L    +       + P+ +  M+      
Sbjct: 493 GAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMP-AWLAPMQVVVMNIAESQA 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q   Q L+  G+R E  L  ++    +++       P  ++ G  ER    + ++
Sbjct: 552 EYAQSLAQSLQKQGVRVEADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|294886613|ref|XP_002771785.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239875547|gb|EER03601.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 820

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/430 (8%), Positives = 103/430 (23%), Gaps = 38/430 (8%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             I N+++D IR  Y   GFD + TP + +S++L +           ++S+  +   W  
Sbjct: 360 AVIYNKLVDFIRREYRLRGFDEVITPNI-FSEALFQQSGHCGNYKDNMYSMNIEGETWF- 417

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           L+            +   +            V    +                  +    
Sbjct: 418 LKPMNCPGHCMIFDQKVRSYKELPIRMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFC 477

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
              ++   +   LE +    N +    +             +    +  + +      D 
Sbjct: 478 RPDQVQDEIVHALEFLKFVYNTFGFDFS-------------VCLSTRPKKAIGSRAIWDT 524

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
            +      ++    +   +       G  +     D +  +        +     +    
Sbjct: 525 AESGLKNALEACGIDYDLNPGDGAFYGPKIDIRLRDALNRYHQ-CGTIQLDFNLPIRFNL 583

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                   E          +    +            +        A +       K   
Sbjct: 584 QYRIAETEESGDAHAASEAANSPVDE-----------QQKGSTQSSAAVENVGSKAKADE 632

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
           +  G +  G          +   +             +  +              V++  
Sbjct: 633 ITLGELKHG--------FERPVMIHRAILGSIERCTAILTEHFGGKWPFWLSPRQVMVVP 684

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +       + Y    + L   G  A+  L S++    +++ A         + G  E++ 
Sbjct: 685 VSDKYSDYADYVR--KQLVRLGYEADADL-STRTMNKKVREAQVAAFNYIAVVGEKEQND 741

Query: 443 GMLQIKDLAK 452
             + ++    
Sbjct: 742 LTVTLRKRDT 751


>gi|229117305|ref|ZP_04246683.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228666205|gb|EEL21669.1| Prolyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 566

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.8 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGKNIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|210615498|ref|ZP_03290625.1| hypothetical protein CLONEX_02841 [Clostridium nexile DSM 1787]
 gi|210150347|gb|EEA81356.1| hypothetical protein CLONEX_02841 [Clostridium nexile DSM 1787]
          Length = 657

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/275 (8%), Positives = 67/275 (24%), Gaps = 35/275 (12%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           +G  D +        +  +    +      +++K +       +      K  + L +  
Sbjct: 403 KGCVDLAKYCLTTLGVEEDVTYRLSLADPDNMDKYLGTREMWDEVEDVMRKMLDHLEINY 462

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
               ++G  +          + +      +    L   +        V          D 
Sbjct: 463 T--EETGEAAFYGPKLDIQAKNVYGKEDTMITIQLDMFLAERFDMTFV----------DK 510

Query: 337 LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
              + +   +  T        L   ++              V +  +             
Sbjct: 511 DGEKKRPYIIHRTAMGCYERTLAWLIEKYAGLFPTWLCPEQVRVLPIS--EKYHDYANKV 568

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN----------CPLAIIQGTGERSRGMLQ 446
              LR  G++  +            + A++             P  ++ G  E   G++ 
Sbjct: 569 ANELRGNGVKCTVD-----------ERAEKIGYKIRETRLDRVPYMLVVGAKEEEEGVVS 617

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           ++    G E  + +    +     +    I   E+
Sbjct: 618 VRSRYLGDEGQKPLDTFINDICKEIRTKEIRKIEV 652



 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 67/223 (30%), Gaps = 11/223 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   I +  E  G+   +TPL+   D             +G+F L
Sbjct: 263 GLPLLMPKGAAMVQTMQRWIEDEEERRGYMRTKTPLMAKKDLYV-ISDHWGHYKEGMFVL 321

Query: 74  QD---DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D   +  +  +LR  +T P   YV           ++YR  P    E     R     +
Sbjct: 322 GDEEKEGEEVFALRP-MTCPFQYYV------YKQSQKSYRDLPCRYGETSTLFRNEDSGE 374

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                       ++  + +      +      +     +    + + +  ++ L   D +
Sbjct: 375 MHGLTRVRQFTISEGHLVIRPDQVEDEFKGCVDLAKYCLTTLGVEEDVTYRLSLADPDNM 434

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
           ++ L      D+++    + +  L      +       G  L 
Sbjct: 435 DKYLGTREMWDEVEDVMRKMLDHLEINYTEETGEAAFYGPKLD 477


>gi|257884339|ref|ZP_05663992.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|261207398|ref|ZP_05922084.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566680|ref|ZP_06447097.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|294613940|ref|ZP_06693875.1| prolyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|257820177|gb|EEV47325.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|260078289|gb|EEW65994.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161539|gb|EFD09422.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291593215|gb|EFF24789.1| prolyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 569

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 72/249 (28%), Gaps = 16/249 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E  G   +  P +  ++ L +     +     ++  
Sbjct: 38  GIYSYLPLANRVLEKLKRIMREEFEKIGAVEMLMPAILPAE-LWEESGRYETYGPNLYRF 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG------R 124
           +D + + + L    + T   L R    ++  +      Y+I P +R+EK           
Sbjct: 97  KDRNDRKMILGPTHEETFTDLMRNEINSYKKLP--LNLYQIQPKYRDEKRPRFGLLRGRE 154

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           F             S +    +      +  +  G++              D        
Sbjct: 155 FIMKDAYSFHATEESLDETYKDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAIS 214

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +              L+      V     +   +   +  K A    + ID +  F 
Sbjct: 215 EIGEDTICYSTESDYAANLEMATSYYV----SKKSHETQLELEKVATPNVKSIDEVADFF 270

Query: 245 SIDLEKSMH 253
           S++ +K + 
Sbjct: 271 SVEPQKIIK 279


>gi|229031449|ref|ZP_04187449.1| Prolyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729738|gb|EEL80718.1| Prolyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 566

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|227514714|ref|ZP_03944763.1| proline--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086918|gb|EEI22230.1| proline--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 581

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 4/98 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+  +I   IR   +  G   +  P L  +D L K     +     +F L+D  
Sbjct: 50  YLPLAYRVIRKIEQIIREEMDKAGAVEMLLPGLLPAD-LWKESGRYEAYGDNLFKLKDRR 108

Query: 78  GQWISLRY--DLTA-PLARYVAENFDTIVFPCRTYRIG 112
            +   L    + T   + R    ++  +       +  
Sbjct: 109 ERDFILGPTHEETVTSILRDAIHSYKKLPLVVYQLQDK 146



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 8/130 (6%)

Query: 350 GFSIGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IG+SRL+ A+    +          +      +I       D ++  +  T  L  A
Sbjct: 451 CYGIGVSRLLSAISEQNADENGLVWPQAVAPFDIHVIPVNAKKEDQMAMAEEITANLEEA 510

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G    +     +  G +   AD    P+ +  G      G+++IK    G+ L    +  
Sbjct: 511 GYEVLVDDRKERA-GVKFADADLIGVPIRVTVGKK-AGEGIVEIKIRKTGETLEVHKEEL 568

Query: 464 ESWREARVAQ 473
            +     + Q
Sbjct: 569 ATNIAILLKQ 578


>gi|209516675|ref|ZP_03265528.1| threonyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502950|gb|EEA02953.1| threonyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 635

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +  ++   +R    + G+  I+TPL+    SL +        
Sbjct: 255 MQDESP-GMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPLIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
            + +F+  + + +  +++        +    +               G   RNE  G   
Sbjct: 313 RENMFT-TESEKRDYAIKPMNCPGHVQVF-NHGLRSYRDLPLRYAEFGSCHRNESSGALH 370



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 2/118 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    +  +   +        + R +  L    +       + P+ +  M+      
Sbjct: 493 GAEYVAEDNSRRRPIMLHRAIVGSMERFLGILIEHHAGAMP-AWLAPMQVVVMNIAESQA 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q+  Q L+  G+R E  L  ++    +++       P  ++ G  ER    + ++
Sbjct: 552 EYAQLLAQSLQKQGVRVEADL-RNEKISYKIREHTLEKVPYLLVVGDKEREAQTVAVR 608


>gi|121610033|ref|YP_997840.1| threonyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|166225514|sp|A1WMG5|SYT_VEREI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|121554673|gb|ABM58822.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Verminephrobacter eiseniae EF01-2]
          Length = 639

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 67/258 (25%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  ++ P +     L +     D+  + +F +
Sbjct: 261 GTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQI-LDQGLWEKTGHWDKYRENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKRDYALKPMNCPG-------HIIIFKQGIKSYRDLPLRFGEFGQCHRNEPSGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    D  +          +            +    D I +             
Sbjct: 372 IMRVRAFTQDDGHIFCTAQQIQSEILAFTALVQKVYRDFGFTDIIYKLATRPEK-----H 426

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +    + D+ +    QG++    E           G  +     D +         +   
Sbjct: 427 IGTEESWDQAEHALAQGLRASGCEFEYLPGEGAFYGPKVEYTLKDALGRQWQCGTIQVDP 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 487 NMPERLDAEFVGEDGARH 504


>gi|90417791|ref|ZP_01225703.1| threonyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337463|gb|EAS51114.1| threonyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 659

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/356 (11%), Positives = 98/356 (27%), Gaps = 28/356 (7%)

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
            R E  G          +     +S         M + +T +         +   + +  
Sbjct: 287 RRQEAEGYQEVNAPQLLERSLWETSGHWEKYHEDMFVTETEDERVFALKPMNCPGHVQIF 346

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
             G+     L    K+ E   V R        GL  V+    +       +    A  + 
Sbjct: 347 KHGLKSYRDLPL--KIAEFGAVHRYEPSGALHGLMRVRAFTQDDAHVFCTEEQITAE-SL 403

Query: 235 EQIDIMVSFLSIDLEKSMH-----ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           +  D+++S       + +         + V      +K    +  +  ++ + G      
Sbjct: 404 KINDLILSIYRDFGFEDVLVKLSTRPEKRVGSDELWDKAEASMRDVLAIIEEQGKGHITT 463

Query: 290 KISSTIVRGL-EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
            ++          Y   + +AI     +   Q         G    D    +     +  
Sbjct: 464 AVAEGDGAFYGPKYEYTLRDAIGRQWQVGTNQVDFNLPGRFGAFYIDRDSEKKTPVMLHR 523

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
                    + + +++             V++ T+  ++D         + LR AG++ E
Sbjct: 524 AMLGSVERFIGILIENCAGHLPLWLSPLQVVVATITSEAD--DYALQVAEELRQAGLQVE 581

Query: 409 MFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
             L + K        +             P+ ++ G  E     + I+ L   ++ 
Sbjct: 582 TDLRNEKINYKVREHSMAK---------VPVIMVCGKREAEERTVNIRRLGAREQT 628



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 4/96 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETP-LLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K  R+   ++  +R   E  G+  +  P LLE S  L +     ++ ++ +F 
Sbjct: 266 GTVFWHPKGWRLYQTLVSYVRRRQEAEGYQEVNAPQLLERS--LWETSGHWEKYHEDMFV 323

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
            + +D +  +L+        +   ++          
Sbjct: 324 TETEDERVFALKPMNCPGHVQIF-KHGLKSYRDLPL 358


>gi|255957075|ref|XP_002569290.1| Pc21g23230 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591001|emb|CAP97220.1| Pc21g23230 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 515

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 13/121 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          + N+++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 70  GSPLFLPNGTHVVNKLISFLRTQYLQYGFREVLTPTI-YKKSLWEISGHWQNYKDDMYEV 128

Query: 74  QDDD-----------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
                           +   L+          + ++N      P R     P+ RNE  G
Sbjct: 129 TGRGASGEADGEVGEDESYGLKPMNCPGHCLLFKSQNHSYRDMPVRYADFSPLHRNEVSG 188

Query: 122 P 122
            
Sbjct: 189 S 189



 Score = 41.4 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 23/122 (18%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      L + ++               ++ T++ D   + + Q        AG R
Sbjct: 341 HRAIFGSLERFLALLIEQHGGHWPFWLSPRQAIVLTVNQDDAVVRQAQEAAAKF--AGFR 398

Query: 407 AEMFLG---------------------SSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           A +  G                     S++  G +++ A +    L  I G+ + + G +
Sbjct: 399 ALLNDGTAEPPRPLSSVDSTFLVDVDTSAQTLGKKIQRAKQMKYNLIFILGSRDLADGGI 458

Query: 446 QI 447
            +
Sbjct: 459 TV 460


>gi|228922573|ref|ZP_04085873.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837002|gb|EEM82343.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 566

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|229098288|ref|ZP_04229235.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228685186|gb|EEL39117.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 566

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|229180095|ref|ZP_04307439.1| Prolyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228603304|gb|EEK60781.1| Prolyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 566

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|114765489|ref|ZP_01444599.1| ATP phosphoribosyltransferase regulatory subunit [Pelagibaca
           bermudensis HTCC2601]
 gi|114542199|gb|EAU45230.1| ATP phosphoribosyltransferase regulatory subunit [Roseovarius sp.
           HTCC2601]
          Length = 362

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 97/339 (28%), Gaps = 46/339 (13%)

Query: 32  SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL 91
            +R  +   G + ++  +L+ +++L     ++ R     +   D     + LR D T P+
Sbjct: 14  RLRARFLEAGAENVDCAILQPAETLLDLYGEDIRAR--TYVTHDPARGEVMLRPDFTVPV 71

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
              V  + +T   P R    G VFR ++  P R  ++ Q   +                 
Sbjct: 72  ---VQMHMETGAAPSRYTYAGEVFRRQEEHPERAPEYFQVGFELFADDDPAQADAEVF-- 126

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL----DKFG 207
              L A  +          +  IL   +  +      +      + R            G
Sbjct: 127 --ALFAETLAPYRLRAVTGDIGILTAAVAGLETSERRRSALMRHIWRPRRFRALLDRYSG 184

Query: 208 LQGV----KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF-------------------- 243
              V    K LL      ++     G    +E    + +                     
Sbjct: 185 RSPVPPSRKALLAAENPMDTAAPAIGLRSETEVAARIAALREDAAEGPLCESQVALIDTL 244

Query: 244 --LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             +      ++ +L+++     A     +      E +   G +   ++  ++  R    
Sbjct: 245 LAVRETCSFALEQLHDIAVDMPALLPAVDRFERRCEALTARGVDVAALEFEASYGRS--- 301

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                 E   GF              V  GGRYD L  R
Sbjct: 302 ----SMEYYDGFVFGFVPTARPDLPPVATGGRYDALTER 336


>gi|143764|gb|AAA22863.1| threonyl-tRNA synthetase (thrS2) (EC 6.1.1.3) [Bacillus subtilis]
          Length = 638

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 39/135 (28%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN +    R +  N G+D + TP    +  L +     D     ++  
Sbjct: 264 GMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTP-FMMNQRLWEQSGHWDHYRDNMY-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +++             +         +YR  P+   E     R       + 
Sbjct: 322 SEVDDTRFAMKPMNCPG-------HMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNG 374

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 375 MLRVRTFCQDDAHIF 389



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/317 (10%), Positives = 81/317 (25%), Gaps = 8/317 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            + +      +       D +    +    + +   N      I +       D      
Sbjct: 299 FMMNQRLWEQSGHWDHYRDNMYFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYRDLPIRMA 358

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
              +         L G+  +      D++  F +   + SE  + +     +        
Sbjct: 359 EFGQVHRHEYSGALNGMLRVRT-FCQDDAHIFVREDQIESEIKEAIRLIDEVYRTFGFEY 417

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             EL         G + L   SE           +        G  Y     +       
Sbjct: 418 SVELSTRPEDSL-GDDSLWEASERALARVLEELGLSYEINEGDGAFYGPKIDFHIKDALK 476

Query: 315 VMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             ++                   + L  + +   +    F        + ++    +   
Sbjct: 477 RSHQCATIQLDFQMPEKFDLTYINELNEKVRPVVIHRAVFGSIDRFFGILIEHYGGAFPV 536

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  + H    L   +     L+ AGIRA +    ++  G +++ +  +  P 
Sbjct: 537 WLAPIQVQIIPVSH--VHLDYCRKVQAELKQAGIRAGID-ERNEKLGYKIRESQVQKIPY 593

Query: 432 AIIQGTGERSRGMLQIK 448
            ++ G  E     + ++
Sbjct: 594 VLVLGDHEEQENAVNVR 610


>gi|221311719|ref|ZP_03593566.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221316045|ref|ZP_03597850.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221320956|ref|ZP_03602250.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221325241|ref|ZP_03606535.1| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767793|ref|NP_391636.2| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|254763338|sp|P18256|SYT2_BACSU RecName: Full=Threonyl-tRNA synthetase 2; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225185421|emb|CAB15783.2| threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 638

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 39/135 (28%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN +    R +  N G+D + TP    +  L +     D     ++  
Sbjct: 264 GMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTP-FMMNQRLWEQSGHWDHYRDNMY-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +++             +         +YR  P+   E     R       + 
Sbjct: 322 SEVDDTRFAMKPMNCPG-------HMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNG 374

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 375 MLRVRTFCQDDAHIF 389



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/317 (10%), Positives = 81/317 (25%), Gaps = 8/317 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            + +      +       D +    +    + +   N      I +       D      
Sbjct: 299 FMMNQRLWEQSGHWDHYRDNMYFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYRDLPIRMA 358

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
              +         L G+  +      D++  F +   + SE  + +     +        
Sbjct: 359 EFGQVHRHEYSGALNGMLRVRT-FCQDDAHIFVREDQIESEIKEAIRLIDEVYRTFGFEY 417

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             EL         G + L   SE           +        G  Y     +       
Sbjct: 418 SVELSTRPEDSL-GDDSLWEASERALARVLEELGLSYEINEGDGAFYGPKIDFHIKDALK 476

Query: 315 VMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             ++                   + L  + +   +    F        + ++    +   
Sbjct: 477 RSHQCATIQLDFQMPEKFDLTYINELNEKVRPVVIHRAVFGSIDRFFGILIEHYGGAFPV 536

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  + H    L   +     L+ AGIRA +    ++  G +++ +  +  P 
Sbjct: 537 WLAPIQVQIIPVSH--VHLDYCRKVQAELKQAGIRAGID-ERNEKLGYKIRESQVQKIPY 593

Query: 432 AIIQGTGERSRGMLQIK 448
            ++ G  E     + ++
Sbjct: 594 VLVLGDHEEQENAVNVR 610


>gi|326437267|gb|EGD82837.1| threonyl-tRNA synthetase 1 [Salpingoeca sp. ATCC 50818]
          Length = 604

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ +   G        +R+ +R+ D IR  +   G++ + TPL+ +S  L +     D  
Sbjct: 175 MQHDTSPGAPFFLPHGVRLLHRLTDLIRRQFRIRGYEEVMTPLV-FSQKLWETSGHWDHY 233

Query: 67  NKGVFSLQ 74
              ++ + 
Sbjct: 234 RDDMYRVM 241


>gi|268323710|emb|CBH37298.1| putative glycyl-tRNA synthetase [uncultured archaeon]
          Length = 486

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  + + ++   K +   Q LR A I  E     S + G + +  D    P  I      
Sbjct: 400 VFPLLNKAELKEKAREVFQNLRDASIFVE--YDGSGSIGRRYRRQDEIGTPYCITIDYET 457

Query: 440 RSRGMLQIKDLAKGKELSREIKNNE 464
                + I++    K++   I   E
Sbjct: 458 LEDDAVTIRERDTMKQVRVPIAEVE 482



 Score = 43.7 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 17/47 (36%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++ R+ +  R+ Y   GF  IET  +          
Sbjct: 37 GFYDYGPLGAGLKRRVENQWRDFYMREGFYEIETTSVVPRSVFEASG 83


>gi|255947314|ref|XP_002564424.1| Pc22g03830 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591441|emb|CAP97671.1| Pc22g03830 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 741

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/484 (10%), Positives = 120/484 (24%), Gaps = 91/484 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N++   +R+ Y   G+  ++TP +   D  + K           +F 
Sbjct: 340 GCPFLLPNGTKIFNQLQSLLRSEYRKRGYQEVQTPNM--YDVGVWKTSGHWAHYKDDMFK 397

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+             +F       R+YR  P+   +     R        
Sbjct: 398 L-DVEKREWALKPMNCPG-------HFILFGHRERSYRELPMRIADFGVLHRNEASGALS 449

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                   +  D  + +     +  V    +     + +   L G   K+ L    +   
Sbjct: 450 GLTRCRKFQQDDCHVVLASHQIMSEVEGLFD----FLQSIYGLFGFTFKLKLSTRPEKYM 505

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             +               +K  L + + D+                            ++
Sbjct: 506 GALETW------DHAEDQLKKALTKFKGDDW---------------------------TI 532

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
           +E      G        + +    +           I      +   +       E    
Sbjct: 533 NEGDGAFYGPKIDITIADAIQREFQCATIQLDYQAPINFKMEYMTKEQSQAEQPKEGETK 592

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              +   +   V                     +           L + ++         
Sbjct: 593 GDELAPGRARPVV--------------------IHRAIIGSFERFLGILIEHFGGKWPFW 632

Query: 373 KEMGPVLIT-TMDHDSDSLSKYQMYTQ--MLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                +LI   M   +D   + Q   Q   L       ++ +  +     +++       
Sbjct: 633 ISPRQILIVPVMPAVNDYAEELQKILQGDKL-----SVDIDISGN-TMQKKIRTGQLAQY 686

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
               + G  ER    + +++                    +   + +P+ E+   +K + 
Sbjct: 687 NFIFVVGASERETRSVNVRNRDD--------------PATQKQGVMVPLEEVRIKLKALR 732

Query: 490 QENK 493
           +E +
Sbjct: 733 KERR 736


>gi|186680962|ref|YP_001864158.1| prolyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|226701314|sp|B2J707|SYP_NOSP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|186463414|gb|ACC79215.1| prolyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 604

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ +D L K     D   K    
Sbjct: 37  SGLYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQLQPAD-LWKESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +FSL D   Q + L     ++   +AR +  ++  +       +  
Sbjct: 96  MFSLIDRREQQLGLGPTHEEVITAIARDMIRSYRQLPLHLYQIQTK 141



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++      D+  +   Q     L  AGI   +     +  G + K AD 
Sbjct: 494 IWPVAIAPYHAIVTIPNIKDAQQVEVAQKLYTELNQAGIETLLDDRDERA-GVKFKDADL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P  I+ G    + G +++ + A  K     I    +
Sbjct: 553 IGIPYRIVTG-RAIANGKVEVVERATRKSQEIVIDEVTT 590


>gi|293189858|ref|ZP_06608572.1| proline--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292821273|gb|EFF80218.1| proline--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 602

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 33/110 (30%), Gaps = 1/110 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                S         V +       +     Q   + L  AG+   +      + G + K
Sbjct: 488 DDKGLSWPAQIAPFDVHVLATGKGDEVFETAQSLGEELDAAGLDVLVDDRRKVSAGVKFK 547

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             +    P  ++ G    +   ++I+  A G+ +   ++   +      A
Sbjct: 548 DYELVGVPFGLVVGRS-LADSEVEIRVRATGETIVLPVEEAVARLRELHA 596



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +R   P G        +R   +I D +R   +  G   +  P L  ++   K     +  
Sbjct: 34  IRRSAP-GIYTWLPLGLRTLRKIEDIVREEMDAMGAQEVHFPGLIPAEPY-KATNRWEEY 91

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F L D  G    L  
Sbjct: 92  GPTLFKLNDRKGGDYLLAP 110


>gi|269986430|gb|EEZ92716.1| threonyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 635

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/126 (11%), Positives = 41/126 (32%), Gaps = 3/126 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
                   +  +        + + L++L+           V + T+   ++     +   
Sbjct: 496 NKEHFPIVIHRSIMGTIGRFMGIILENLKGELPVWLAPVQVKVLTITERNN--EYAEGII 553

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L+   IR E  + +      +++ A     P  I+ G  E  +  + +++       +
Sbjct: 554 KKLKDNNIREESDIENG-TLDYKIRKAQLEKIPFIIVIGDKEEEKKTIAVRNRKGKTRYN 612

Query: 458 REIKNN 463
            +I   
Sbjct: 613 VDIDEF 618



 Score = 38.3 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G     TK   I N +L   + + + Y +  I TP++   D L K     D+  + +F +
Sbjct: 252 GSPFFTTKGTIIYNELLKFAKELDKKYDYTEIITPIIAKID-LWKISGHFDKYKENMFRV 310

Query: 74  QD-DDGQWISLRYDLTA 89
              +  +   L+     
Sbjct: 311 TPFESDEEYGLKPMNCP 327


>gi|229104381|ref|ZP_04235050.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228679079|gb|EEL33287.1| Prolyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 566

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|152989860|ref|YP_001355582.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151421721|dbj|BAF69225.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 613

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 40/98 (40%), Gaps = 1/98 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  I  +      ++  +     L    + +E++  S  +   +++ A+++  P+  I G
Sbjct: 515 PTQIIFVPIADSHVAYAKELQDKLLQMDVDSEIY-DSKDSLNKRIRNAEKQKVPMVAIIG 573

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             E     L I+D  +  + +       +  + +++++
Sbjct: 574 DKEVESKSLAIRDRREKTQYNITESEFFTKIKEKLSEV 611



 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K  R+R+++   +   +   G++P+  P +  SD L K         + ++
Sbjct: 231 GLPIWLPKGARLRSKLESLLFAAHRKRGYEPVRGPEILKSD-LWKKSGHYQNYKENMY 287


>gi|320539025|ref|ZP_08038700.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030958|gb|EFW12962.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 642

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/348 (14%), Positives = 99/348 (28%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMG 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + +E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQVRAEVNACIRMVYDVYATFGFDK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +++   +E    +    N I +   +  G  Y     +       
Sbjct: 416 IAVKLSTRPEKRIGTDDMWTRAEEDLAAALTENGIPLEYQLGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      VS    + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFFLPGRLSASYVSEDNDRVVPVMIHRAILGSMERFIGILTEEYAGFYP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWIAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  +  R   + Q+ 
Sbjct: 594 LVCGDKEVEAGNVAVRTRRGKDLGSQDVNEVVNKLLKEIRSRSLHQLE 641



 Score = 38.7 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/203 (6%), Positives = 49/203 (24%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTVFRELEAFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             +      D I  K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRAEVNACI--------RMVYDVYATFGFDKIAVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA + L     +
Sbjct: 425 EKRIGTDDMWTRAEEDLAAALTE 447


>gi|298674446|ref|YP_003726196.1| threonyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287434|gb|ADI73400.1| threonyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 637

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/182 (9%), Positives = 43/182 (23%), Gaps = 19/182 (10%)

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
             +   +  + +     R   +     +E      +        V   V     YD    
Sbjct: 415 EMAKTVNKPVLVEMWDTRFFYFV--LKFEFNFIDALGKASALSTVQIDVENAETYDISYI 472

Query: 340 RFK-----GQNVPATGFSIGISRLIVALK------SLESSTNNIKEMGPVLITTMDHDSD 388
                      +  +        +   L+                 + P  +  +     
Sbjct: 473 DRNGESKRPTMLHCSPSGAIERCIYALLEKNAMKIDNGEVPMLPVWLSPTQVRIIPVHEH 532

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM--LQ 446
                +   + L     R ++        G +++ A R   P  ++ G  E   G   + 
Sbjct: 533 HFDFAEKIYEQL---NCRVDIDDRED-TVGKKIREAGREWIPYVVVIGDREIESGKLNVT 588

Query: 447 IK 448
           I+
Sbjct: 589 IR 590


>gi|257898235|ref|ZP_05677888.1| prolyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293570616|ref|ZP_06681667.1| prolyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257836147|gb|EEV61221.1| prolyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|291609287|gb|EFF38558.1| prolyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 569

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 72/249 (28%), Gaps = 16/249 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E  G   +  P +  ++ L +     +     ++  
Sbjct: 38  GIYSYLPLANRVLEKLKRIMREEFEKIGAVEMLMPAILPAE-LWEESGRYETYGPNLYRF 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG------R 124
           +D + + + L    + T   L R    ++  +      Y+I P +R+EK           
Sbjct: 97  KDRNDRKMILGPTHEETFTDLMRNEINSYKKLP--LNLYQIQPKYRDEKRPRFGLLRGRE 154

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           F             S +    +      +  +  G++              D        
Sbjct: 155 FIMKDAYSFHATEESLDETYKDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAIS 214

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +              L+      V     +   +   +  K A    + ID +  F 
Sbjct: 215 EIGEDTICYSTESDYAANLEMATSYYV----SKKSHETQLELEKVATPNVKSIDEVADFF 270

Query: 245 SIDLEKSMH 253
           S++ +K + 
Sbjct: 271 SVEPQKIIK 279


>gi|229025259|ref|ZP_04181679.1| Prolyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228736012|gb|EEL86587.1| Prolyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 566

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|195387892|ref|XP_002052626.1| GJ17652 [Drosophila virilis]
 gi|194149083|gb|EDW64781.1| GJ17652 [Drosophila virilis]
          Length = 745

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 41/132 (31%), Gaps = 18/132 (13%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +   +      + P  +  +          +     L  AG  +E    +   
Sbjct: 621 ERMIAILTENYAGKWPFWLSPRQVMVVPVGPAYDEYAKSVRDQLYAAGFMSEADCDAGDT 680

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              +++ A        ++ G  ERS   + ++                           +
Sbjct: 681 MNKKIRNAQLAQFNFILVVGDKERSSNTVNVR------------------TRDNKVHGEV 722

Query: 477 PISELVSTVKKI 488
            ++EL++ ++KI
Sbjct: 723 SVAELITKLQKI 734



 Score = 40.2 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N +++ IR  Y   GF  + +P + Y+  L             +FS + + 
Sbjct: 369 FQPRGAHIYNTLMNLIRGEYRKRGFQEVISPNI-YNAKLWMTSGHWQHYADNMFSFEAEK 427

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 428 -EKFALKPMNCPG 439


>gi|313678529|ref|YP_004056269.1| threonine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950500|gb|ADR25095.1| threonine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 582

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/142 (9%), Positives = 42/142 (29%), Gaps = 2/142 (1%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D      +   +           + + L+  + +           I  ++   + L   
Sbjct: 443 IDKNNKEVRPIMIHRGLIGTYERFVAILLEQTKGNLPFWIAPKQATIIPVNLSEN-LKYA 501

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + L  +  R ++   S +    +++ A        +I G+ E +   +  ++  K 
Sbjct: 502 KKVAKKLLNSDFRVKID-DSDERLNKKIRNAQVSKSKFQLILGSNEMNSNTVSYREYGKE 560

Query: 454 KELSREIKNNESWREARVAQIT 475
           +  +  I +     +       
Sbjct: 561 ETTTVSINDFIKLLKKLRNNYE 582



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + I N I + +  + + YGF  + TP    ++ L K           +F  
Sbjct: 202 GFPIWLENGMYIHNEIKNLVLKLDKKYGFTEVLTPHF-GAELLYKTSGHLAHYKDDMFKP 260

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              + + +  R  +T P       +         +YR  P+  +E+    R+ +
Sbjct: 261 LLVENETLIPRP-MTCP------HHIIVYNTEKHSYRDLPIRYSEQSQLYRYEK 307


>gi|228940907|ref|ZP_04103466.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973836|ref|ZP_04134412.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980425|ref|ZP_04140735.1| Prolyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228779245|gb|EEM27502.1| Prolyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785861|gb|EEM33864.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818743|gb|EEM64809.1| Prolyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326941586|gb|AEA17482.1| prolyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 566

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.1 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  + +   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQIYITN 563


>gi|145511255|ref|XP_001441555.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408805|emb|CAK74158.1| unnamed protein product [Paramecium tetraurelia]
          Length = 937

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/502 (10%), Positives = 128/502 (25%), Gaps = 58/502 (11%)

Query: 3   KKTKLRA--ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           KK  L    +L  G A        I N +++ +R  Y   G+  + +P + ++  L K  
Sbjct: 336 KKQNLYLFHQLSPGSAFFYPSGAHIYNTLMNFLRRQYYIRGYQEVISPNI-FNAQLWKIS 394

Query: 61  PDEDRPNKGVFSLQDDDGQ-WISLRYDLTAP------------------LARYVAENFDT 101
              D+  + +F   +   +    L+                         A +   + + 
Sbjct: 395 GHYDKYKENLF-FINMGEEGEYGLKPMNCPGHCLMFDMVQHSYRDLPIRFADFGVLHRNE 453

Query: 102 IVFPCR-TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
           +        R+    +++ H   R  Q      + +   +                    
Sbjct: 454 VHGALTGLTRVRRFQQDDAHIFCRMDQIQDEIKNCLDFLSYIYSLFGFEFKLYLSTRPEK 513

Query: 161 KRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK--------------- 205
                 +  N    L+  L+K G H +    +       ID                   
Sbjct: 514 FLGTKDVWDNAEYQLEQGLKKFGKHFEINPGDGAFYGPKIDVKLYDAYKREHQCGTIQLD 573

Query: 206 ---FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                   ++    E   +   D     N   +    ++     +  +S     +++   
Sbjct: 574 FNLPERFNLQFRASEDVHEVQQDKETVHNEQIQVAQEIIDIHRKESHQSDQAEGDVLSTP 633

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA------------I 310
               +  +E     ++       S+++                 + A             
Sbjct: 634 PRHLQEQSEQPGELKVQSTHSLQSDKVLEQQQQQYQQLQLQQHSHSASSLLHKKQKLPEE 693

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           L     ++         V    +Y+      K            I   +  + ++ +   
Sbjct: 694 LLESGSSQALSNHELHKVLHEKKYELGYHHLKPGFARPVIIHRAILGSLERMIAVLTEQC 753

Query: 371 NIKEMGPV---LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             K    +    +      +      +  +  LR  G        S +    +++ A  +
Sbjct: 754 GGKWPFWLSPKQLILCPVSAYYRDVAEKISARLRLEGYTVNTD-ESDQTLAKKVRNAQVQ 812

Query: 428 NCPLAIIQGTGERSRGMLQIKD 449
                 + G  E   G++ I+D
Sbjct: 813 YYNFVGVIGEEEVRTGVIDIRD 834


>gi|325923311|ref|ZP_08184984.1| prolyl-tRNA synthetase, family II [Xanthomonas gardneri ATCC 19865]
 gi|325546238|gb|EGD17419.1| prolyl-tRNA synthetase, family II [Xanthomonas gardneri ATCC 19865]
          Length = 564

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 90  GGQLLKIKDRKEQEFC 105


>gi|325928567|ref|ZP_08189755.1| prolyl-tRNA synthetase, family II [Xanthomonas perforans 91-118]
 gi|325541106|gb|EGD12660.1| prolyl-tRNA synthetase, family II [Xanthomonas perforans 91-118]
          Length = 564

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 90  GGQLLKIKDRKEQEFC 105


>gi|294664482|ref|ZP_06729831.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292605740|gb|EFF49042.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 621

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 88  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 146

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 147 GGQLLKIKDRKEQEFC 162


>gi|294625222|ref|ZP_06703863.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600496|gb|EFF44592.1| prolyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 621

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 88  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 146

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 147 GGQLLKIKDRKEQEFC 162


>gi|289662612|ref|ZP_06484193.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668443|ref|ZP_06489518.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 564

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 90  GGQLLKIKDRKEQEFC 105


>gi|170760063|ref|YP_001788858.1| glycyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169407052|gb|ACA55463.1| glycine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 463

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/226 (8%), Positives = 55/226 (24%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +   +     +       E +   +  ++   + +        +    +        
Sbjct: 238 EWFNYWKDYCWNFLINLGINKENIRFRDHSQEELSHYSNATSDIEFLFPFGWGELWGVAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F +    +      +       +  V      ++ A    +         + LE   
Sbjct: 298 RTDFDLKKHMEHSGEDLNYLDPTTKERYVPYCIEPSLGADRVVLAFLVDAYDEEELEGGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        K Q    ML +      +    + + G + +  
Sbjct: 358 VRNVLHLHPALAPFKAAVLPLSKKLSDKSQEVYSML-SKKFN--IDYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  I           + I+D     ++   I   E + E +
Sbjct: 415 DEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVSINELEKFIEDK 460


>gi|188993111|ref|YP_001905121.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|226701356|sp|B0RVJ2|SYP_XANCB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167734871|emb|CAP53083.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 564

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 90  GGQLLKIKDRKEQEFC 105


>gi|166713436|ref|ZP_02244643.1| prolyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 564

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 90  GGQLLKIKDRKEQEFC 105


>gi|162138530|ref|YP_365423.2| prolyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|114152278|sp|Q3BP90|SYP_XANC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 90  GGQLLKIKDRKEQEFC 105


>gi|21109942|gb|AAM38410.1| prolyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 583

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 50  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 108

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 109 GGQLLKIKDRKEQEFC 124


>gi|77748729|ref|NP_643874.2| prolyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|114152277|sp|Q8PGP9|SYP_XANAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 90  GGQLLKIKDRKEQEFC 105


>gi|21230114|ref|NP_636031.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66769896|ref|YP_244658.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|81304150|sp|Q4UQN5|SYP_XANC8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|81860394|sp|Q8PCS4|SYP_XANCP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21111643|gb|AAM39955.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575228|gb|AAY50638.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 564

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 90  GGQLLKIKDRKEQEFC 105


>gi|78037678|emb|CAJ25423.1| prolyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 621

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   +  P ++  + L       ++ 
Sbjct: 88  MIRKLASGLYTWSPLGLRVLRKVEAIVREEMNRAGAVEVLFPTIQPRE-LWDATGRWEKF 146

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D   Q   
Sbjct: 147 GGQLLKIKDRKEQEFC 162


>gi|330876247|gb|EGH10396.1| tRNA synthetase class II family protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 195

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 8/128 (6%)

Query: 35  NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARY 94
            I+   G +    P L   D+  +     +     +++  D  G+   L  + TA     
Sbjct: 9   AIFIEAGAEEAIVPALWGQDTFIEKAGGSEIIG-QMWAFNDKAGRACCLIPEATA----L 63

Query: 95  VAEN---FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
             E              + +   +R E+   GR+R+F Q  ++ +G S + A      + 
Sbjct: 64  FQERSELLLNGRSEALFFYVARCYRYERPQAGRYREFTQLGLEILGPSPQQALLCSQAIC 123

Query: 152 ADTLEAVG 159
              L+++G
Sbjct: 124 TGFLDSLG 131


>gi|257055522|ref|YP_003133354.1| threonyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585394|gb|ACU96527.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
           [Saccharomonospora viridis DSM 43017]
          Length = 692

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/456 (11%), Positives = 119/456 (26%), Gaps = 98/456 (21%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            G      K   +R  + D  R  +E  G++ + TP +  +              +G++ 
Sbjct: 288 SGLPVFHPKGGVVRKVLEDYSRRRHEEAGYEFVNTPHITKAQLFETS-GHLHWYREGMYP 346

Query: 72  ------SLQDDD-----GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                    DD      GQ   L+             +        R+YR  P+   E  
Sbjct: 347 GMHLDAEYNDDGTVRKPGQDYFLKPMNCP-------MHNLIYRSRGRSYRELPLRLFEFG 399

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              R+ +                             A G  ++D HI     ++ D I  
Sbjct: 400 TVYRYEKSGVVHG--------------------LTRARGFTQDDAHIYCTVDQMHDEIKS 439

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +    D        +LR     D +     +       +D   +    A  ++ +   +
Sbjct: 440 LLQFVLD--------LLRDYGLDDFYLELSTRDPEKSIGSDEDWERATDALRSAAEASGL 491

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
              +      + +     V+   A  + +  +  I   + +        + S    +   
Sbjct: 492 -DLVLDPGGAAFYAPKISVQAKDAIGRSWQ-MSTIQVDLMEPELFGLEYQASDGSKQQPV 549

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
                ++ +I  F  +  +     F +                                 
Sbjct: 550 MIHRALFGSIERFFGVLTEHYAGAFPAWLA------------------------------ 579

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                           PV +  +      +   +   + LR  GIR E+     +    +
Sbjct: 580 ----------------PVQVVGIPIADAHVEHLRGVEKALRDRGIRVELDTSDDR-MQKK 622

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           ++    +  P  ++ G  +   G +  +    G ++
Sbjct: 623 IRTHTTQKVPFLLLAGGRDVEAGAVSFR-FRDGSQI 657


>gi|237747667|ref|ZP_04578147.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229379029|gb|EEO29120.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 635

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 42/152 (27%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I  ++   +R +Y+  G+  ++ P +    SL +     D   + +F+ 
Sbjct: 261 GLIFWHAKGWTIWQQVEQYMRRVYQENGYQEVKGPQI-LDRSLWEKSGHWDNYKENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+        +    N  +       Y         +              
Sbjct: 319 TESENRIYALKPMNCPGHVQIYRSNLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                     + ++        + +     D+
Sbjct: 379 TQDDGHIFCTEDQILDECVAFTDLLKKVYQDF 410



 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV  T ++         Q   Q ++ AG RAE+ L  ++    +++       P  I
Sbjct: 535 WLAPVHATVLNISDSQAEYAQSVVQTMKKAGFRAEVDL-RNEKITYKIRDHSVNKVPYLI 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  E++   + ++
Sbjct: 594 VVGDKEKNANTVAVR 608


>gi|229174485|ref|ZP_04302017.1| Prolyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228609045|gb|EEK66335.1| Prolyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 566

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++ +++   +R   E  G   +  P ++ ++ L +           
Sbjct: 34  QNASGIYSFLPFGLKVLHKVERIVREEMERAGAVELLMPAMQAAE-LWQESGRWYSYGSE 92

Query: 70  VFSLQDDDGQWISL 83
           +  ++D + +  +L
Sbjct: 93  LMRMKDRNAREFAL 106



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 458 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 517 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 563


>gi|212691282|ref|ZP_03299410.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855]
 gi|237712289|ref|ZP_04542770.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237726428|ref|ZP_04556909.1| threonyl-tRNA synthetase [Bacteroides sp. D4]
 gi|212666514|gb|EEB27086.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855]
 gi|229434954|gb|EEO45031.1| threonyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229453610|gb|EEO59331.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 646

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/418 (11%), Positives = 106/418 (25%), Gaps = 26/418 (6%)

Query: 62  DEDRPNKGV--FSLQDDDGQWISLR---YDLTAPLARY--VAENFDTIVFPCRTYRIGPV 114
           D  +  K +  F   D  G+   L       TA   R                       
Sbjct: 242 DHRKIGKEMDLFMFTDMVGK--GLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
            +N     G + ++ +     + +  E  +  +  M       +       +  +  R  
Sbjct: 300 NKNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIA 359

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
             G + +    G+     R+      D         VK         +  +    +    
Sbjct: 360 EFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVM--DIINIVFKSMNFE 417

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +     ++ EK +       K   A  +   E        +     +        
Sbjct: 418 NVEAQISLRDKVNREKYIGSDENWEKAEQAIIEACEE---KGLTAKVEYGEAAFYGPKLD 474

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            +             I     + E+ +    GS            + +   +    F   
Sbjct: 475 FMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDN---------QKHRPVMIHRAPFGSM 525

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              + V ++              V I  +          +     LR   +RA +    +
Sbjct: 526 ERFVAVLIEHTAGKFPLWLTPDQVAILPIS--EKFNEYAEKVKAELRKFDVRAIVD-DRN 582

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  G +++  + +  P  +I G  E   G + ++   +G + + +I+         V+
Sbjct: 583 EKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEEFGKNIAEEVS 640


>gi|172041003|ref|YP_001800717.1| glycyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171852307|emb|CAQ05283.1| glycyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
          Length = 459

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 29/99 (29%), Gaps = 3/99 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  +          +     LR  G+   +   +S   G + +  D    P  +
Sbjct: 362 SPVKVAVLPLSKKETLTPTAEKIADKLR--GLW-NIDYDTSGAIGRRYRRQDEIGTPYCV 418

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + +++    ++    I   E +   R+A
Sbjct: 419 TVDFDTLEDNAVTVRERDTMEQERVSIDELEGYLAQRLA 457


>gi|227529103|ref|ZP_03959152.1| prolyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350947|gb|EEJ41238.1| prolyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 580

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+  ++ + IR   E  G   +  P L  +D L K     +     +F L+D  
Sbjct: 42  YLPMAYRVIRKVENIIRQEMEKAGAVEMMMPALLPAD-LWKESGRYESYGDNLFKLKDRR 100

Query: 78  GQWISLRY 85
            +   +  
Sbjct: 101 DRDFIMGP 108



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 39/108 (36%), Gaps = 2/108 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             ++I      +I      +D +      T  L  AG    +     +  G +   +D  
Sbjct: 467 WPDSIAPFDVHVIPVNAKKADQMEMANELTVALEKAGYDVLVDDRKERA-GVKFADSDLI 525

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             P+ I  G    S G++++K    G+ +  + +   +     + Q++
Sbjct: 526 GIPIRITVGKK-ASDGIVEVKIRKTGETVEVKTEEVVNTVAILLKQLS 572


>gi|313811577|gb|EFS49291.1| prolyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
          Length = 581

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 473 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 532 DSEILGMPTSVVVGRR-LKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 580



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106


>gi|313773524|gb|EFS39490.1| prolyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313831317|gb|EFS69031.1| prolyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834927|gb|EFS72641.1| prolyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314974192|gb|EFT18288.1| prolyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976699|gb|EFT20794.1| prolyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314984337|gb|EFT28429.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|315095331|gb|EFT67307.1| prolyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327328406|gb|EGE70168.1| proline--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327444193|gb|EGE90847.1| prolyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327444928|gb|EGE91582.1| prolyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328760064|gb|EGF73644.1| proline--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 581

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 473 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 532 DSEILGMPTSVVVGRR-LKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 580



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106


>gi|312601535|gb|ADQ90790.1| Threonyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 370

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/250 (10%), Positives = 74/250 (29%), Gaps = 10/250 (4%)

Query: 225 DFTKGANLTSEQID--IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKS 282
           + +    + SE +D   +  F     ++      +  +     ++   +L    E  + +
Sbjct: 127 EISHLFQMISEVLDFFKVQIFYISFSKRDPKNKDKFFQDDQMWDQAEADLKQFLEQNKIN 186

Query: 283 GYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK 342
                +I  ++     +++         L    +           +     ++   +   
Sbjct: 187 --YIEKIGEAAFYGPKIDFQVKTALNKELTISTLQLDFLLPEKFKISFINEHNKKETPIL 244

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
                     IG     +AL   +S  N    + P  I  +          Q   ++L  
Sbjct: 245 IH-----RGLIGTYERFIALLLEQSKGNLPFWISPKQIIVIPVAEKHNDFAQKIHKILFD 299

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
            G  +E+ L S +    +++ A+       +I G  E ++  +  +     +     + +
Sbjct: 300 LGFNSEIDLRSER-ISRKIREANLEKINFQVIIGDEEITKNEITYRKFGSPELFRISLVD 358

Query: 463 NESWREARVA 472
                ++   
Sbjct: 359 FVDLLKSSEK 368


>gi|242239483|ref|YP_002987664.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131540|gb|ACS85842.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 642

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 94/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + +E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQVRTEVNSCIKMVYDMYGTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N I        G  Y     +       
Sbjct: 416 IAVKLSTRPEKRIGSDEMWDRAEEDLAAALTENGIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLNASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSDYVSELTRKLQDAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  E  R   + Q+ 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSIDVSEVINKLQEEIRSRSLHQLE 641



 Score = 40.6 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/203 (6%), Positives = 50/203 (24%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             +      + I  K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRTEVNSCI--------KMVYDMYGTFGFEKIAVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA + L     +
Sbjct: 425 EKRIGSDEMWDRAEEDLAAALTE 447


>gi|226306390|ref|YP_002766350.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259516659|sp|C0ZZ26|SYT_RHOE4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226185507|dbj|BAH33611.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 685

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 42/113 (37%), Gaps = 5/113 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +             T+ L+ AG+RAE+     +    +++    +  P  +
Sbjct: 570 WLAPVQVVGIPVAEAFADHLFDVTKKLKAAGVRAEVDFSDDR-MQKKIRNHTTQKVPFML 628

Query: 434 IQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQIT--IPISELVS 483
           + G  +   G +  +    G +++   + +        + +     P +ELV 
Sbjct: 629 LAGERDVEAGAVSFR-FRDGTQINGIPVDDAVRIITEWIGRRENASPTAELVQ 680


>gi|260802092|ref|XP_002595927.1| hypothetical protein BRAFLDRAFT_268618 [Branchiostoma floridae]
 gi|229281179|gb|EEN51939.1| hypothetical protein BRAFLDRAFT_268618 [Branchiostoma floridae]
          Length = 681

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 2/78 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N+++D I+  Y   GF  + +P + Y+  L K     D   + +FS + + 
Sbjct: 300 FLPKGAHIYNKLIDYIKEEYHKRGFQEVVSPNM-YNVKLWKTSGHWDHYEENMFSFEVEK 358

Query: 78  GQWISLRYDLTAPLARYV 95
            +  +L+           
Sbjct: 359 -ETFALKPMNCPGHCLMY 375



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/221 (8%), Positives = 55/221 (24%), Gaps = 8/221 (3%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           EK   +        +      ++  +   +  G   + G   +  +   +    Q   + 
Sbjct: 458 EKAIGDKETWDRAEKHLASALDKFGMPWKLNPGDGAFYGPKIDIQVFDALRRAHQCATIQ 517

Query: 326 GSVGGGGRYD------GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
                  R++          + +   +           + +  ++              +
Sbjct: 518 LDFNNPERFNLTYVSGDGDEKKRPVMIHRAILGSVERFIAILCENFGGKWPFWLSPRQAM 577

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I  +  D +     Q     +  AG   E           +++ A        ++ G  E
Sbjct: 578 IVPVSPDQN--EYAQKVRNSIHEAGFMCEADCDPGDTMNKKIRNAQLAQYNFIMVVGKKE 635

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
              G + ++         R +++     +    +      E
Sbjct: 636 VESGTVNVRTRDNKVHGERSVEDVILRFKKLQNERVKNSEE 676


>gi|159040920|ref|YP_001540172.1| glycyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157919755|gb|ABW01182.1| glycyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 590

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 6/109 (5%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLR----TAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                 IT       S  +     + +R      GI A          G +    D    
Sbjct: 470 PRDVAPITVAVLPIVSRGELIKVAKDIRINLINEGITA--VYDDGGTIGARYAKWDSLGT 527

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           PLA+           + ++D     ++  ++++  S     +   +I  
Sbjct: 528 PLAVTVDADTLKDNTVTVRDRDSRVQVRVKVQDLVSIIRELLRGKSINE 576


>gi|258593203|emb|CBE69542.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) [NC10
           bacterium 'Dutch sediment']
          Length = 572

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 1/74 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G         R+ ++I   IR          I  P+L  ++ L +         + 
Sbjct: 34  QLAAGIYITLPLGQRVMDKISAIIREEMNRIDGQEITMPVLHPAE-LWQQTGRWATIGEE 92

Query: 70  VFSLQDDDGQWISL 83
           +F L D   + + L
Sbjct: 93  MFRLYDRGKRQMCL 106



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 20/133 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             L     +      + +  ++     +++  +     L+ AGI   ++    +  G + 
Sbjct: 450 DDLGIIWPSAIAPFQLHLLPVNMRDQKMAELAEALYSQLQQAGIET-LYDDRDERAGVKF 508

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
           K AD    P+ +  GT     GM+ +K     KE+                   IP+SE 
Sbjct: 509 KDADLLGLPMRMTIGTRTLKEGMVDLKIRKTAKEV------------------QIPLSEA 550

Query: 482 VSTVKKILQENKE 494
           VSTV  +L    +
Sbjct: 551 VSTVHSLLSRPAK 563


>gi|299821392|ref|ZP_07053280.1| proline--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817057|gb|EFI84293.1| proline--tRNA ligase [Listeria grayi DSM 20601]
          Length = 495

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 58/169 (34%), Gaps = 17/169 (10%)

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                   D  V +        T  ++ +                      V+I  +   
Sbjct: 261 EFTNREGIDTPVYQSSWGITTRTIGALIMVHG----DDRGLMLPPRIAPIQVIIVPIAQH 316

Query: 387 SDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
            + +    +     L+  GIR ++ L S K  G +   ++ +  P+ I  G  +   G +
Sbjct: 317 KEGVIAAGESILARLQEKGIRTKIDL-SDKQPGWKFNESEMKGIPIRIEMGPRDMEAGQV 375

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
            +     G++ +  ++  E++           ++EL+ T+++ L E  +
Sbjct: 376 IVVRRDTGEKTAVAMEGLEAY-----------VTELLETIQRNLFEQAK 413


>gi|330836102|ref|YP_004410743.1| Prolyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748005|gb|AEC01361.1| Prolyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 586

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 1/65 (1%)

Query: 19  PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
                R   +I   IR   +  G   I  P++  +D   K        +K +   QD  G
Sbjct: 43  LPLGYRSVKKIESIIRQEMDAIGGQEILMPVVNPADI-WKSTGRYYSIDKEMSRFQDRVG 101

Query: 79  QWISL 83
           + + L
Sbjct: 102 RDMVL 106



 Score = 41.4 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG-- 453
               L  AGI   ++    ++ G +   AD    P+ I  G      G +++K L     
Sbjct: 494 IYGRLTHAGIEV-LYDDRKESAGVKFADADLLGMPIRITVGNRSLKEGKVEVK-LRSQPD 551

Query: 454 KELSREIKNNESWREARVAQITIPISE 480
           +  + ++ + E    A    +   + E
Sbjct: 552 EIHTFDLADLEKEIIALADSMEKNLKE 578


>gi|326570601|gb|EGE20637.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 639

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 85/317 (26%), Gaps = 10/317 (3%)

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
              +       + +     ++ DY I   N      +  +      D             
Sbjct: 303 WEKSGHWDNYGEMMFTTASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHR 362

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L G+ + +     D++  F   A +  E ++ +   L +  +     +   +  
Sbjct: 363 NEPSGSLHGI-MRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                 G +EL  ++E       ++  +        G  Y     +        + +   
Sbjct: 422 RPEKRVGADELWDLAEQALADALDNAGLDWELQAGEGAFYGPKIEFSLQDCIGRVWQCGT 481

Query: 322 ---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGP 377
                                R +   +           + + ++         +     
Sbjct: 482 LQLDFNLPERLNAEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQV 541

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V++   D  +DS+         L   G RA   L  ++  G +++       P  +I G 
Sbjct: 542 VVMNITDKQADSVGD---VVSKLNAKGYRAISDL-RNEKIGFKIRERTLERIPFMLILGD 597

Query: 438 GERSRGMLQIKDLAKGK 454
            E   G + ++    G+
Sbjct: 598 KEVESGTVNVRT-RTGE 613



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R + ++ G+  I+TP +       K     D  
Sbjct: 255 MQEQAP-GMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKS-GHWDNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+    + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 GEMMFT-TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH 370


>gi|319936200|ref|ZP_08010620.1| prolyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319808774|gb|EFW05307.1| prolyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 479

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 2/101 (1%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                       V+I  +    D  L K     Q L+  GIR ++   + K+ G +   A
Sbjct: 282 GLVLPPRVAPTQVMIIPIQQQKDGVLDKAYELEQQLKAHGIRVKVD-ATDKSPGWKFSEA 340

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           + R  PL +  G  +   G   +     G++++  +  N S
Sbjct: 341 EMRGIPLRLEVGPRDLENGQCVVAKRVNGEKITLSLDENLS 381


>gi|304391869|ref|ZP_07373811.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303296098|gb|EFL90456.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 663

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 69/210 (32%), Gaps = 8/210 (3%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           E+G++    I   V +     +  +I + +  G   + G  +E +L   +  + Q     
Sbjct: 436 EEGWDRSEEIMGKVLEKIAADSDGRIKTELNPGEGAFYGPKFEYVLRDAIGRDWQCGTTQ 495

Query: 326 GSVGGGGRY-----DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                  R+     D    + +   V           + + ++              V++
Sbjct: 496 VDFALPERFGAFYIDKDSQKQEPVMVHRAICGSMERFIGILIEHFAGHFPLWISPLQVVV 555

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
            T+  ++D   +  +  + LR AG+R E     ++    +++       P+ I  G  E 
Sbjct: 556 ATITSEADPYGE--IVAEELREAGLRVETDF-RNEKINYKVREHSLAKVPVIIAVGGREA 612

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
               + ++ L    + S  +    +     
Sbjct: 613 EERTVSVRRLGSKHQTSMTLDEAVASLSDE 642


>gi|297544412|ref|YP_003676714.1| glycyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842187|gb|ADH60703.1| glycyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 462

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/253 (10%), Positives = 63/253 (24%), Gaps = 24/253 (9%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +F+    E    EL    K     E          + + + G     ++        L 
Sbjct: 212 GNFIFRTREFEQMELEFFCKPGEDMEWFNYWRKYCMDWLLEFGLKKENLRFRDHKKEELS 271

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----------YDGLVSRFKGQNVPATG 350
           +Y+    +    FP    +   +   +     +          Y    +  K        
Sbjct: 272 HYSTATTDIEYNFPFGWGELWGIANRTDFDLRQHMEHSGVDLSYMDPATGEKYIPYCIEP 331

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLI-----------TTMDHDSDSLSKYQMYTQM 399
                  ++  L               V++             +                
Sbjct: 332 SVGVDRLMLAFLIDAYEEEELENGETRVVLRLHPALAPIKAAVLPLSKKLSENAYKLYDQ 391

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR    +  +    + + G + +  D    P  I       +   + I+D    +++  +
Sbjct: 392 LRN---KFVVDYDETGSIGKRYRRQDEIGTPFCITYDFDSENDHCVTIRDRDTMEQVRIK 448

Query: 460 IKNNESWREARVA 472
           I+  E + E R+ 
Sbjct: 449 IEEVEKYLEERLN 461


>gi|227544954|ref|ZP_03975003.1| prolyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300910015|ref|ZP_07127475.1| proline--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185065|gb|EEI65136.1| prolyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300892663|gb|EFK86023.1| proline--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 577

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 20/128 (15%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             N+I      +I       D ++      Q L  AG    +     +  G +   +D  
Sbjct: 467 WPNSIAPFDVHVIPVNAKKEDQMAMADKIDQQLTEAGYEVLVDDRKERA-GVKFADSDLI 525

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P+ +  G      G+++IK    G+                   + +   ELV+TV  
Sbjct: 526 GIPIRVTVGKK-AQDGIVEIKIRKTGE------------------TVEVKQEELVNTVGI 566

Query: 488 ILQENKEE 495
           +L++  EE
Sbjct: 567 LLKQLNEE 574



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+  ++ + IR+  +  G   +  P L  +D L K     +     +F L+D  
Sbjct: 42  YLPLAYRVIRKVENIIRDEMDKAGAVEMLMPGLLPAD-LWKESGRYESYGDNLFKLKDRR 100

Query: 78  GQWISLRY 85
            +   L  
Sbjct: 101 DRDFILGP 108


>gi|73662500|ref|YP_301281.1| glycyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123747875|sp|Q49Y08|SYG_STAS1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|72495015|dbj|BAE18336.1| glycyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 463

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/218 (8%), Positives = 53/218 (24%), Gaps = 5/218 (2%)

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYN--SNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           + +K     E+        ++ +            +            +   ++      
Sbjct: 248 QWLKDLNLSEEATRLRDHDADELSHYSNATTDIEYRFPFGWGELWGIASRTDFDLKKHSE 307

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
              E  +     +      Y    S    +   A          +   K   +  +    
Sbjct: 308 HSGEDFQYHDQETGEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDSRTVLHFHPA 367

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
           + P     +              + L +A     +    S++ G + +  D    P  I 
Sbjct: 368 LAPYKAAVLPLSKKLSGDAIKVFEEL-SADFA--IDFDESQSIGKRYRRQDEIGTPYCIT 424

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                     + ++D    +++   I   +S+   +V 
Sbjct: 425 FDFDSLEDEKVTVRDRDTMEQVRMPITELKSFLAEKVK 462


>gi|1565235|emb|CAB02510.1| Threonyl tRNA Synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 601

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 39/135 (28%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN +    R +  N G+D + TP    +  L +     D     ++  
Sbjct: 227 GMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTP-FMMNQRLWEQSGHWDHYRDNMY-F 284

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D    +++             +         +YR  P+   E     R       + 
Sbjct: 285 SEVDDTRFAMKPMNCPG-------HMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNG 337

Query: 134 DNVGSSAETADAEMC 148
                +    DA + 
Sbjct: 338 MLRVRTFCQDDAHIF 352



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/317 (10%), Positives = 81/317 (25%), Gaps = 8/317 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            + +      +       D +    +    + +   N      I +       D      
Sbjct: 262 FMMNQRLWEQSGHWDHYRDNMYFSEVDDTRFAMKPMNCPGHMLIFKNSLYSYRDLPIRMA 321

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
              +         L G+  +      D++  F +   + SE  + +     +        
Sbjct: 322 EFGQVHRHEYSGALNGMLRVRT-FCQDDAHIFVREDQIESEIKEAIRLIDEVYRTFGFEY 380

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             EL         G + L   SE           +        G  Y     +       
Sbjct: 381 SVELSTRPEDSL-GDDSLWEASERALARVLEELGLSYEINEGDGAFYGPKIDFHIKDALK 439

Query: 315 VMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             ++                   + L  + +   +    F        + ++    +   
Sbjct: 440 RSHQCATIQLDFQMPEKFDLTYINELNEKVRPVVIHRAVFGSIDRFFGILIEHYGGAFPV 499

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  + H    L   +     L+ AGIRA +    ++  G +++ +  +  P 
Sbjct: 500 WLAPIQVQIIPVSH--VHLDYCRKVQAELKQAGIRAGID-ERNEKLGYKIRESQVQKIPY 556

Query: 432 AIIQGTGERSRGMLQIK 448
            ++ G  E     + ++
Sbjct: 557 VLVLGDHEEQENAVNVR 573


>gi|259500519|ref|ZP_05743421.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191209|ref|ZP_07267463.1| threonyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309807138|ref|ZP_07701115.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|309810241|ref|ZP_07704086.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|259167903|gb|EEW52398.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308166489|gb|EFO68691.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308169513|gb|EFO71561.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 643

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 1/140 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +             +     ++      
Sbjct: 499 SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTWLAPLQVKIIPVNNDAHGEY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q     L   G RAE+    ++  G +++ A  +  P  ++ G  E     + ++    
Sbjct: 559 AQNVKDQLMKLGFRAEVDF-RNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGS 617

Query: 453 GKELSREIKNNESWREARVA 472
             + S+ +    S   A VA
Sbjct: 618 EDQESKALSEFVSELSADVA 637



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  + + +  G+  + TP+L   D+  K         + +F
Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKEVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYREDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 375

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                ++  A++  ++ +      I    + +   + K  D       
Sbjct: 376 REMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDYYFRLSYRDPKNTDKYFANDE 435

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 436 MWERSQKM 443


>gi|49474171|ref|YP_032213.1| threonyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|73919771|sp|Q6FZZ7|SYT_BARQU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49239675|emb|CAF26046.1| Threonyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 658

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/382 (12%), Positives = 114/382 (29%), Gaps = 14/382 (3%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET-ADAEMCMMMADTL 155
           +    +     +Y    +  ++       +   +   +  G       +    +   +  
Sbjct: 271 QKGWKMFQNLISYMRRRLDDHQYSEVNAPQVLDKSLWELSGHWGWYKENMFKAIPAIEDW 330

Query: 156 EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
           +   I          + +I    L+        +L E  +V R        GL  V+   
Sbjct: 331 DDKCIYALKPMNCPGHVQIFKHSLKSY-RDLPVRLAEFGVVHRYEPSGALHGLMRVRS-- 387

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNE 271
                D++  F     L  E ++I    LS   +    E+   +          +  ++ 
Sbjct: 388 --FTQDDAHIFCTDEQLADECLNINDLILSTYADFGFKEISLKLSTRPEKRVGSDSLWDH 445

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
              I E V K+       +I ++I+ G   + G  +E  L   +  E Q           
Sbjct: 446 AENIMESVLKTIETKFAGQIKTSILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLP 505

Query: 332 GRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
            R+D        +            G     + +     + +    + P  +      S+
Sbjct: 506 ERFDAFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHMPLWLAPEQVVVAAITSE 565

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +    +  T  L+  G+ A+  L  ++    +++    +  P+ ++ G  E     + ++
Sbjct: 566 ANEYAKKITARLKAVGLSAKSDL-RNEKINYKIREHSLQKVPVILVCGKREAETNSVSMR 624

Query: 449 DLAKGKELSREIKNNESWREAR 470
            L    ++   I+      +  
Sbjct: 625 RLGSTDQVFLSIEETIEQLKNE 646


>gi|163846770|ref|YP_001634814.1| threonyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524584|ref|YP_002569055.1| threonyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163668059|gb|ABY34425.1| threonyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222448463|gb|ACM52729.1| threonyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 594

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +   +   Q L  AG+R E+     +    +++ A  +  P  +
Sbjct: 494 WLAPVQAVVIPITDKQMEFARQVRQRLFMAGLRVELDDNRDR-MQGKIRRAQLQKIPYML 552

Query: 434 IQGTGERSRGMLQIK 448
           I G  E +   + ++
Sbjct: 553 IIGAREEAADSVAVR 567


>gi|309805191|ref|ZP_07699243.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165425|gb|EFO67656.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 461

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 1/140 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +             +     ++      
Sbjct: 317 SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTWLAPLQVKIIPVNNDAHGEY 376

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q     L   G RAE+    ++  G +++ A  +  P  ++ G  E     + ++    
Sbjct: 377 AQNVKDQLMKLGFRAEVDF-RNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGS 435

Query: 453 GKELSREIKNNESWREARVA 472
             + S+ +    S   A VA
Sbjct: 436 EDQESKALSEFVSELSADVA 455



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  + + +  G+  + TP+L   D+  K         + +F
Sbjct: 77  GLPYWMPKGATIRRVIERYIIDKEVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYREDMF 133

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 134 PPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 193

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                ++  A++  ++ +      I    + +   + K  D       
Sbjct: 194 REMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDYYFRLSYRDPKNTDKYFANDE 253

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 254 MWERSQKM 261


>gi|303244992|ref|ZP_07331315.1| prolyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302484644|gb|EFL47585.1| prolyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 471

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 76/249 (30%), Gaps = 18/249 (7%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +    E        E   N++    E +       + + I + I +  E+      E 
Sbjct: 150 REIMTFKEAHTAHATKEDAENQVK---EAINIYKNFFDELGIPTIISKRPEWDKFPGAEY 206

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGR---------YDGLVSRFKGQNVPATGFSIGISRLIV 360
            + F  +    K +  G+V   G+         ++              G S  +   I+
Sbjct: 207 TMAFDTIFPDGKTMQIGTVHNLGQNFAKTFELEFETADGGKDYAYQTCYGISDRVIASII 266

Query: 361 ALKSLESSTNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           AL   E        + P+ I  +       +  +++K +     L+  G R ++     +
Sbjct: 267 ALHGDEKGLILPPNVAPIQIVIIPLLFKGKEEIAMNKAEEVYNTLKEKGFRVKLDDRDIR 326

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +    + +  P+ I  G  +     + +     G++      +        +  I 
Sbjct: 327 -PGRKFNDWELKGAPIRIELGPRDIENKKITLFRRDTGEKFQINEDDLLDGINNTMNSIM 385

Query: 476 IPISELVST 484
             I E  + 
Sbjct: 386 KTIKEKANE 394



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +IR    + IRN+ +  G D    P+L   D L K           V
Sbjct: 27  PIKGCGVYLPYGFKIRKYAFEIIRNMLDETGHDEALFPMLIPEDLLAKEGEHIKGFEDEV 86

Query: 71  FSLQDDDGQW-----ISLRY 85
           +      G+      ++LR 
Sbjct: 87  Y-WVTHGGKTPLDVKLALRP 105


>gi|294497108|ref|YP_003560808.1| glycyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|295702473|ref|YP_003595548.1| glycyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294347045|gb|ADE67374.1| glycyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294800132|gb|ADF37198.1| glycyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 460

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/228 (7%), Positives = 56/228 (24%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +   E     +       E V + +       + +             +       +
Sbjct: 235 EWFNYWKETCNKWLLSLGMKEENVRLRDHDDDELSHYSNATTDFEYKFPFGWGELWGVAS 294

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +    +              +  V      ++ A   ++    +I A +      
Sbjct: 295 RTDYDLKQHMEHSGEDFQYVDQETNERYVPYCIEPSLGADRVTLAY--MIDAYEEETLED 352

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-----AGIRAEMFLGSSKNFGNQLKYA 424
            + + +  +        +  L   +  +   R      A     +    + + G + +  
Sbjct: 353 GSSRTVMQLHPALAPFKAAVLPLSKKLSNEARAVFEDLAKYF-MIDYDDAGSIGKRYRRH 411

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  I           + I++    ++    I + ++  E    
Sbjct: 412 DEIGTPFCITFDFDSLEDNQVTIRNRDTMEQKRVAISDLKNIIEEATQ 459


>gi|269217027|ref|ZP_06160881.1| ATP phosphoribosyltransferase regulatory subunit [Slackia exigua
           ATCC 700122]
 gi|269129566|gb|EEZ60650.1| ATP phosphoribosyltransferase regulatory subunit [Slackia exigua
           ATCC 700122]
          Length = 505

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 89/259 (34%), Gaps = 32/259 (12%)

Query: 35  NIYENYGFDPIETPLLEYSDSLG--KFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
            +Y   G++       E  D     +    +D       S  D  G+ ++L+ D+T  + 
Sbjct: 113 ALYRTSGYERYRMNKFEPYDLYLEHRGFLRDDAV----ISFTDPRGRLMALKPDVTMSIV 168

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEM-CMMM 151
               +N        R + I  VFR    G   F +  Q  ++ +G  +    +++   ++
Sbjct: 169 ----KNASVDAAVERLFYIENVFRV-PPGGSEFAEIAQMGLECLGCDSGRVQSDVDAEVV 223

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
           A     + +      + +++  +L  +L+   L  + +       LR I   +  GL  V
Sbjct: 224 ALACRTLDVCGGRSRLAVSHMGLLSALLDACLLEDESR----DQALRCIRLKNAAGLADV 279

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKGTIAGEKGFN 270
                           +GA    E  D ++  L++     S  E  + +  +    +   
Sbjct: 280 ---------------LRGAGAPFESQDALLGALAVSSPLSSAVEFLKALPLSRVALEAVE 324

Query: 271 ELVVISELVRKSGYNSNRI 289
            L  + + +  SG     I
Sbjct: 325 ALEALVKRLVASGEEPCAI 343


>gi|145348874|ref|XP_001418868.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579098|gb|ABO97161.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 674

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 34/92 (36%), Gaps = 1/92 (1%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             + A+ +   +      + P  +  +     S        + LR AG  AE+ + + + 
Sbjct: 562 ERMFAILTEHFAGKWPYWLSPKQVMIVPISEASRDYCYEVKRQLRKAGHFAEVDV-TDRK 620

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +++ A        ++ G  E++   + ++
Sbjct: 621 MQKKVREAQLDQFNYILVCGESEKANETVNVR 652



 Score = 40.2 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 3/103 (2%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
            RI N ++  IR  Y  Y +D + TP +   D L K         + +FS   +  +   
Sbjct: 315 ARIYNNLVQFIREKYWEYEYDEVITPNIYNFD-LWKTSGHAAHYKENMFSFNVEK-EEFG 372

Query: 83  LRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           L+          +   +      P R    G + RNE  G   
Sbjct: 373 LKPMNCPGHCVMFAHRHRTYRELPMRVADFGVLHRNEFSGALH 415


>gi|189083494|sp|A9KGU5|SYP_COXBN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ D +R      G   +  P+++ + SL +     +  
Sbjct: 31  MLRKLASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPA-SLWQESGRWEAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  + D             ++   +AR   +++  +       +  
Sbjct: 90  GAELLRIMDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTK 138



 Score = 36.7 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 5/109 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSK-NFGN 419
                          + +  ++           +     L  AG   E+     K   G 
Sbjct: 458 DERGIIWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGY--EVLWDDRKERPGV 515

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                D    P  ++       RG+++ K     +  +  ++N  S   
Sbjct: 516 MFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 564


>gi|312875562|ref|ZP_07735563.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311088816|gb|EFQ47259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 643

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 1/140 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +             +     ++      
Sbjct: 499 SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTWLAPLQVKIIPVNNDAHGEY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q     L   G RAE+    ++  G +++ A  +  P  ++ G  E     + ++    
Sbjct: 559 AQNVKDQLMKLGFRAEVDF-RNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGS 617

Query: 453 GKELSREIKNNESWREARVA 472
             + S+ +    S   A VA
Sbjct: 618 EDQESKALSEFVSELSADVA 637



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  + + +  G+  + TP+L   D+  K         + +F
Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKEVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYREDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 375

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                ++  A++  ++ +      I    + +   + K  D       
Sbjct: 376 REMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDYYFRLSYRDPKNTDKYFANDE 435

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 436 MWERSQKM 443


>gi|309803316|ref|ZP_07697413.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164824|gb|EFO67074.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 643

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 1/140 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +             +     ++      
Sbjct: 499 SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTWLAPLQVKIIPVNNDAHGEY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q     L   G RAE+    ++  G +++ A  +  P  ++ G  E     + ++    
Sbjct: 559 AQNVKDQLMKLGFRAEVDF-RNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGS 617

Query: 453 GKELSREIKNNESWREARVA 472
             + S+ +    S   A VA
Sbjct: 618 EDQESKALSEFVSELSADVA 637



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  + + +  G+  + TP+L   D+  K         + +F
Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKEVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYREDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 375

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                ++  A++  ++ +      I    + +   + K  D       
Sbjct: 376 REMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDYYFRLSYRDPKNTDKYFANDE 435

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 436 MWERSQKM 443


>gi|294790871|ref|ZP_06756029.1| threonine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458768|gb|EFG27121.1| threonine--tRNA ligase [Scardovia inopinata F0304]
          Length = 685

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 4/114 (3%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R    L    +       + PV +  +     +    +     L  + +R EM     
Sbjct: 547 IERFFAILLEHYAGAFP-AWLAPVQVLGVPVSEANSDYLKEILDRLDESLVRCEMDASDD 605

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWR 467
           + FG +++ A +   P  +I G  +++RG +  +    G +L+   + N  +W 
Sbjct: 606 R-FGKKIRNASKSKTPFILIVGDDDQARGAVSFR-FRDGSQLNGVAVDNALAWI 657


>gi|313887217|ref|ZP_07820913.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923446|gb|EFR34259.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 650

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/128 (9%), Positives = 37/128 (28%), Gaps = 3/128 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++                +  +              
Sbjct: 512 NQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLAPDQ--VVILPVSERFNEYANEVA 569

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L    I   +    ++  G +++  + +  P  +I G  E++ G + ++   +G   +
Sbjct: 570 AALSEHDISVSID-DRNEKVGRKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEGDVGT 628

Query: 458 REIKNNES 465
            +I     
Sbjct: 629 EKISTFAE 636



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 75/260 (28%), Gaps = 11/260 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  ++R ++ D ++ I + YG+  + TP +   +   K      +     F +
Sbjct: 265 GLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMTPHIGNVELY-KTSGHYAKYGADSFQV 323

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
                +G+   L+             + +       +YR  PV   E     R+ Q  + 
Sbjct: 324 ITTPQEGEAFMLKPMNCP-------HHCEIYRLKPHSYRDLPVRLAEFGTVYRYEQSGEL 376

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                       DA +        E   +K  D    I      +    +I L      +
Sbjct: 377 HGLTRVRGFTQDDAHIFCRPDQVKEEF-LKVMDIIFIIFRALDFENFEAQISLRSQTDRS 435

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           + +      D+ ++  ++  +        +       G  L     D +     +   + 
Sbjct: 436 KYIGSEENWDRAEQAIIEACQEAGLPAHVEYDEAAFYGPKLDFMVKDALGRRWQLGTIQV 495

Query: 252 MHELYELVKGTIAGEKGFNE 271
            + L E       GE     
Sbjct: 496 DYNLPERFDLEYTGEDNQKH 515


>gi|312871712|ref|ZP_07731800.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872982|ref|ZP_07733042.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874225|ref|ZP_07734259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|315653646|ref|ZP_07906566.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325912186|ref|ZP_08174584.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|329920107|ref|ZP_08276938.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|311090295|gb|EFQ48705.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091504|gb|EFQ49888.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092654|gb|EFQ51010.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315489008|gb|EFU78650.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325476136|gb|EGC79304.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|328936561|gb|EGG33005.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 643

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 1/140 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +             +     ++      
Sbjct: 499 SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTWLAPLQVKIIPVNNDAHGEY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q     L   G RAE+    ++  G +++ A  +  P  ++ G  E     + ++    
Sbjct: 559 AQNVKDQLMKLGFRAEVDF-RNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGS 617

Query: 453 GKELSREIKNNESWREARVA 472
             + S+ +    S   A VA
Sbjct: 618 EDQESKALSEFVSELSADVA 637



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  + + +  G+  + TP+L   D+  K         + +F
Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKEVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYREDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 375

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                ++  A++  ++ +      I    + +   + K  D       
Sbjct: 376 REMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDYYFRLSYRDPKNTDKYFANDE 435

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 436 MWERSQKM 443


>gi|309808028|ref|ZP_07701947.1| anticodon binding domain protein [Lactobacillus iners LactinV
           01V1-a]
 gi|308168711|gb|EFO70810.1| anticodon binding domain protein [Lactobacillus iners LactinV
           01V1-a]
          Length = 275

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 1/140 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +             +     ++      
Sbjct: 131 SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTWLAPLQVKIIPVNNDAHGEY 190

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q     L   G RAE+    ++  G +++ A  +  P  ++ G  E     + ++    
Sbjct: 191 AQNVKDQLMKLGFRAEVDF-RNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGS 249

Query: 453 GKELSREIKNNESWREARVA 472
             + S+ +    S   A VA
Sbjct: 250 EDQESKALSEFVSELSADVA 269


>gi|257887080|ref|ZP_05666733.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257895645|ref|ZP_05675298.1| prolyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293377744|ref|ZP_06623933.1| proline--tRNA ligase [Enterococcus faecium PC4.1]
 gi|257823134|gb|EEV50066.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257832210|gb|EEV58631.1| prolyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292643744|gb|EFF61865.1| proline--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 569

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 72/249 (28%), Gaps = 16/249 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E  G   +  P +  ++ L +     +     ++  
Sbjct: 38  GIYSYLPLANRVLEKLKRIMREEFEKIGAVEMLMPAILPAE-LWEESGRYETYGPNLYRF 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG------R 124
           +D + + + L    + T   L R    ++  +      Y+I P +R+EK           
Sbjct: 97  KDRNDRKMILGPTHEETFTDLMRNEINSYKKLP--LNLYQIQPKYRDEKRPRFGLLRGRE 154

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           F             S +    +      +  +  G++              D        
Sbjct: 155 FIMKDAYSFHATEESLDETYKDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAIS 214

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +              L+      V     +   +   +  K A    + ID +  F 
Sbjct: 215 EIGEDTICYSTESDYAANLEMATSYYV----SKKSHETQLELEKVATPNVKSIDEVADFF 270

Query: 245 SIDLEKSMH 253
           S++ +K + 
Sbjct: 271 SVEPQKIIK 279



 Score = 36.7 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 36/117 (30%), Gaps = 9/117 (7%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLGSSKNFG 418
                +         + I  M+   +  +     T  L  A    G    +   + +  G
Sbjct: 458 DEQGINWPKGIAPFDLHIVQMNLKDEYQTN---LTNELEEAMTKAGYEVLVDDRNERA-G 513

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            +   +D   CP+ I  G      G++++K    G+ +    +   +     + Q  
Sbjct: 514 VKFADSDLIGCPIRITVGKKAVE-GIVEVKIKKTGEMVEVRKEELANTLPILLNQGE 569


>gi|253688275|ref|YP_003017465.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259516611|sp|C6DFY6|SYT_PECCP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|251754853|gb|ACT12929.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 642

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/348 (13%), Positives = 94/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVMWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N I+       G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAAALTENNIEFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDTQSDYVNELTRKLQEAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  +  R   + Q+ 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVISKLQQEIRSRSLHQLE 641



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/205 (6%), Positives = 52/205 (25%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   ++Y +  ++ P       + +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGP-FMMDRVMWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 425 EKRIGSDEMWDRAEADLAAALTENN 449


>gi|163795474|ref|ZP_02189441.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159179460|gb|EDP63991.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 640

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/152 (11%), Positives = 43/152 (28%), Gaps = 1/152 (0%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I + IR   E  G+  I+TP L    +L +     D+  + +F+ 
Sbjct: 262 GSVFWHPKGWTLYRVIENYIRGRLEEGGYREIKTPQLIDR-ALWEASGHWDKFREAMFTA 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +D + ++L+        +   +   +                 +              
Sbjct: 321 NAEDDKVLALKPMNCPGHVQVYKQGLKSYRDLPLRLAEFGSCHRNEPSGALHGIMRVRAF 380

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +     + ++        + +     D+
Sbjct: 381 TQDDAHIFCTEDQITSESIRFCDLLKSVYRDF 412



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/246 (10%), Positives = 75/246 (30%), Gaps = 8/246 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +TSE I       S+  +    ++            G + +   +E   
Sbjct: 383 DDAHIFCTEDQITSESIRFCDLLKSVYRDFGFEDIRIKFSDRPEVRAGEDAVWDRAEGAL 442

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           +S  ++  +  +     G  Y     +  +      + +   +    V         V+ 
Sbjct: 443 RSACDAAGLDTTLNPGEGAFYGPKLEF-VLRDAIGRDWQCGTLQVDFVLPERLDANYVAE 501

Query: 341 FKGQNVPATGFSIGISRLI----VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
              +  P          +     + ++              V++ T+ +D+D  ++    
Sbjct: 502 SGERKRPVMLHRAIFGSMERWIGILIEQYSGRFPMWLSPLQVVVATITNDADGYAE--EV 559

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
               + AG+R  M    ++    +++       P  ++ G  E     + ++ L    + 
Sbjct: 560 AAACKAAGLRVAMD-RRNEKINYKIREHSEAKVPAILVVGAREAEGRSVAVRRLGGQAQE 618

Query: 457 SREIKN 462
              + +
Sbjct: 619 VLALDD 624


>gi|313905495|ref|ZP_07838859.1| prolyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469679|gb|EFR65017.1| prolyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 479

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 73/229 (31%), Gaps = 19/229 (8%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V ++ +             +   +          EA++      +      F  +   
Sbjct: 183 LNVYADFLENDLAIPVVKGQKTEKEKFAGAKHTYTVEALMHDGKALQSGTSHNFDDIFAQ 242

Query: 332 G---RYDGLVSRFKGQNVPATGFSIGISRLIVAL--KSLESSTNNIKEMGPVLITTMDHD 386
               +Y    +  K  +  + G +  +   ++ +   +             V+I  +  D
Sbjct: 243 AYDVQYTDKDNTLKHVHQTSWGMTTRVIGAMIMVHGDNSGLVLPPHIAPTQVMIIPIRQD 302

Query: 387 SD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           ++  L K     + L TAGIR ++   + K  G +    + R  P+ +  G  +   G  
Sbjct: 303 AEGVLDKAVEIKEKLATAGIRVDLD-DTDKRPGWKFSEQEMRGIPVRVELGPKDVENGSA 361

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK-ILQENK 493
            +      ++L   I                  +EL+ T++K +L   K
Sbjct: 362 VLVRRDTREKLVVSIDEIAE-----------KTAELLETIQKEMLDRAK 399


>gi|307720827|ref|YP_003891967.1| prolyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978920|gb|ADN08955.1| prolyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 568

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 31/104 (29%), Gaps = 4/104 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              ++  G  +      R+  +I + I       G   +E   +  ++ L +     ++ 
Sbjct: 31  FITQVAAGLYNYLPLAKRVIKKIENIINEEMTKIGAQEVELSFVTPAE-LWQESGRIEKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
            K +    D       L     ++   + R    ++  +     
Sbjct: 90  GKELLRFHDRKNNLFVLGPTHEEMMVDVVRNRVTSYKNLPLNLY 133



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 81/263 (30%), Gaps = 16/263 (6%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS----IDLEKSMHELYELVKGTIAGEKG 268
             L E +  N+ +     ++T E++  +         +D +K+ H +   +K       G
Sbjct: 302 DNLQEVKAVNATEALDIVDVTEEELKEIGLVPGFIGPLDQDKAKHVIDSDLKDAKDMICG 361

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
            NE       V  S  +          V   +    C  E  L F    E       G+ 
Sbjct: 362 ANEAGYHYIGVDLSVLSDVAYFEDIAEVNEGDICPHCE-EGTLSFTKGIEVGHIFKLGTT 420

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG------PVLITT 382
                    +           G        +VA    +   +N            V I  
Sbjct: 421 YSEALKAEFLDENGKAQPFIMGTYGMGVSRMVAAVIEQHHDDNGCIWTKATAPYMVNIMI 480

Query: 383 MDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGER 440
            +   ++  +  +   + L+ A    E+ L   K  FG ++K A+    P  I+ G  E 
Sbjct: 481 SNIKDEAQVQAGEKLYKQLQDAD--VEVMLDDRKERFGFKMKDAELIGFPYTIVIG-KEL 537

Query: 441 SRGMLQIKDLAKGKELSREIKNN 463
             G +QI +    ++   + +  
Sbjct: 538 VNGHMQIFERVTKEKTDIKSEEI 560


>gi|282890339|ref|ZP_06298867.1| hypothetical protein pah_c016o048 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499721|gb|EFB42012.1| hypothetical protein pah_c016o048 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 641

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+ E P G      K   I N +L  +R   ++  +  I+TP +   D L +        
Sbjct: 254 LKEEAP-GMPFIHPKGTIIWNELLAYLRQCLDDKNYIEIKTPTMMTRD-LWELSGHWSNY 311

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYV 95
            + +F+ + ++ +  +++         Y 
Sbjct: 312 RQNMFTSEIEN-RDFAIKPMNCPGCMLYY 339



 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 8/81 (9%), Positives = 28/81 (34%), Gaps = 4/81 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +      +   +   +  + AG   ++   S+++   +++ A        +
Sbjct: 534 WISPLQVRLIPVADRHVEYARTLRKQFKQAGFHCDID-ESNESVSKKVRNAQLSQINYML 592

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
             G  E     +   +L   +
Sbjct: 593 TVGDQEVQNHTV---NLRTRE 610


>gi|238021043|ref|ZP_04601469.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147]
 gi|237868023|gb|EEP69029.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147]
          Length = 637

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+         +     L+ AG RAE+ L  ++  G +++    +  P  I
Sbjct: 538 WLAPVQMVVMNITEKQADYCREVVAKLQAAGFRAELDL-RNEKIGYKIRDNSSQRYPYQI 596

Query: 434 IQGTGERSRGMLQIK 448
           + G  E   G + ++
Sbjct: 597 VVGDKEMENGQVAVR 611



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   I   +R      G+  ++TP +    +  +           +F L
Sbjct: 264 GMVFWHPRGWTLWQVIEQHMRRELTAAGYQEVKTPQIMDK-TFWEKSGHWANYKDNMF-L 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 322 TSSEKRDYAVKPMNCPGHVQIFNHGLRSYNDLPMRLAEFGSCHRNEPSGALH 373


>gi|168183598|ref|ZP_02618262.1| glycine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796979|ref|YP_002864531.1| glycyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673186|gb|EDT85147.1| glycine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262061|gb|ACQ53094.1| glycine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 463

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/226 (8%), Positives = 55/226 (24%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +   +     +       E +   +  ++   + +        +    +        
Sbjct: 238 EWFNYWKDYCWNFLINLGINKENIRFRDHSQEELSHYSNATSDIEFLFPFGWGELWGVAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F +    +      +       +  V      ++ A    +         + LE   
Sbjct: 298 RTDFDLKKHMEHSGEDLNYLDPTTKERYVPYCIEPSLGADRVVLAFLVDAYDEEELEGGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        K Q    ML +      +    + + G + +  
Sbjct: 358 VRNVLHLHPALAPFKAAVLPLSKKLSDKSQEVYSML-SKKFN--IDYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  I           + I+D     ++   I   E + E +
Sbjct: 415 DEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVNINELEKFIEDK 460


>gi|153938880|ref|YP_001392872.1| glycyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934776|gb|ABS40274.1| glycine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320849|gb|ADG01227.1| glycine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 463

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/226 (8%), Positives = 55/226 (24%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +   +     +       E +   +  ++   + +        +    +        
Sbjct: 238 EWFNYWKDYCWNFLINLGINKENIRFRDHSQEELSHYSNATSDIEFLFPFGWGELWGVAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F +    +      +       +  V      ++ A    +         + LE   
Sbjct: 298 RTDFDLKKHMEHSGEDLNYLDPTTKERYVPYCIEPSLGADRVVLAFLVDAYDEEELEGGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        K Q    ML +      +    + + G + +  
Sbjct: 358 VRNVLHLHPALAPFKAAVLPLSKKLSDKSQEVYSML-SKKFN--IDYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  I           + I+D     ++   I   E + E +
Sbjct: 415 DEIGTPYCITVDFDTLEDNTVTIRDRDTMNQIRVNINELEKFIEDK 460


>gi|55981844|ref|YP_145141.1| threonyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|7388285|sp|P56881|SYT_THET8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6689424|emb|CAB65483.1| threonyl-tRNA synthetase [Thermus thermophilus]
 gi|55773257|dbj|BAD71698.1| threonyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 659

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 1/88 (1%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                  +     L+ AG+RAE      +    +++ A+ +  P  ++ G  E++ G + 
Sbjct: 567 EKQEDYAREVAGRLKEAGLRAEADTRPER-MQARIRDAEVQKVPYILVVGEREKAEGAVS 625

Query: 447 IKDLAKGKELSREIKNNESWREARVAQI 474
           ++   KG   +  +            + 
Sbjct: 626 VRRRKKGNLGTMPLAAFLEGALREYRER 653



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 4/114 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV-- 70
           +G      K   +R  ++  +R      G+  + TP +   +                  
Sbjct: 271 KGLVLWLPKGNVVREELMAFMREEQVRRGYQLVTTPHIGSLELYKTSGHYPYYAESQFPP 330

Query: 71  FSLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGP 122
            S ++    +   L+        R  A    +    P R    G V+R EK G 
Sbjct: 331 ISFKERGEEEEYLLKPMNCPHHIRIYAYRKRSYRELPLRLAEFGTVYRYEKAGE 384


>gi|313159213|gb|EFR58586.1| threonine--tRNA ligase [Alistipes sp. HGB5]
          Length = 650

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 36/108 (33%), Gaps = 3/108 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + V L+                +  +          Q   + L
Sbjct: 511 HRPIMIHRAPFGSMERFVAVLLEHTGGKFPLWLSPQQ--VVVLPISEKFNDYAQQVAEYL 568

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             + +R E+    ++  G +++  + +  P  +I G  E + G++ ++
Sbjct: 569 NRSDVRTEVD-DRNEKIGRKIRDNELKRIPYLLIVGEKEEAEGLVSVR 615



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 20/47 (42%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R+R+   +RN+ + YG+  + TP +   +      
Sbjct: 261 GLPLWLPKGAALRDRLEQFLRNVQKEYGYQQVITPHIGNKELYVTSG 307


>gi|291571004|dbj|BAI93276.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 604

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 1/92 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV++  +    + L   +   +  R+  IRAE      +  G  ++ A++   P+  
Sbjct: 502 WLAPVMVRLLPVSDEFLPFVESVAEKWRSLDIRAEADHSHDR-LGKMIRNAEKAKVPVMA 560

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           + G  E     L I+  A G+  +  +   +S
Sbjct: 561 VVGAKEVESNSLSIRTRALGELGTLTVAETQS 592



 Score = 37.5 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   +R  + D ++      G+ P+ TP L   +   K      +  + +F
Sbjct: 222 GLPLWTPKGTILRTTLEDFLKREQVRRGYQPVVTPHLGRVNLF-KTSGHWQKYREDLF 278


>gi|258572188|ref|XP_002544856.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237905126|gb|EEP79527.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1228

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 9/168 (5%)

Query: 22   EIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWI 81
            E+ ++  +   + +I++N+G   +ET       +     P  +    GV  L D DG  +
Sbjct: 909  EMVLQGAVKSQLTSIFQNHGA--VET-------TRQALFPRSNYYGPGVVRLLDPDGNQV 959

Query: 82   SLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE 141
             L +DLT P AR VA    +I        +     +                 N    A 
Sbjct: 960  QLPFDLTLPNARSVARQHPSIEKMFSFGTVFREAVHGGQPRAHNEVDFDIVSHNTLDLAL 1019

Query: 142  TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                 + ++         ++       +N+  +LD I+    +    +
Sbjct: 1020 KEAEAIKVLDEVLDGFPSLRSAQMCYHLNHSDLLDTIIAFCRISVKQR 1067


>gi|206580341|ref|YP_002237974.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288934884|ref|YP_003438943.1| threonyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290509026|ref|ZP_06548397.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|238065116|sp|B5XQC6|SYT_KLEP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|206569399|gb|ACI11175.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|288889593|gb|ADC57911.1| threonyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289778420|gb|EFD86417.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 642

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDETWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPQRLSASYVGENNERQVPVMIHRAILGSLERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWIAPVQVVVMNITDSQAEYVNELTRKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL     +S  I+  +    +R  Q 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSMD-VSEVIEKLQQEIRSRSLQQ 639



 Score = 40.6 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 11/155 (7%), Positives = 37/155 (23%), Gaps = 3/155 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                      +     + ++   +   +  V   
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDM 407


>gi|150396275|ref|YP_001326742.1| threonyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166225503|sp|A6U8C7|SYT_SINMW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150027790|gb|ABR59907.1| threonyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 660

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 88/271 (32%), Gaps = 20/271 (7%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E + I    LS+  +    E+   +        G +EL   +E V 
Sbjct: 389 DDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDELWDRAEAVM 448

Query: 281 ----KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-- 334
               K+    +  +I + I+ G   + G  +E  L   +  E Q            R+  
Sbjct: 449 TEVLKTIEAQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGA 508

Query: 335 ---DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
              D    + +   +           L + L++             V++ T+  ++D   
Sbjct: 509 FYIDSESEKRQPVMIHRAICGSMERFLGILLENFAGHMPLWISPLQVVVATITSEADDYG 568

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR----NCPLAIIQGTGERSRGMLQI 447
           +     + LR AG+  E    + K     + Y  R       P+ ++ G  E     + I
Sbjct: 569 R--EVAERLRDAGLTVETDFRNEK-----INYKVREHSVTKVPVIVVCGKREAEERSVNI 621

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPI 478
           + L    + +  +    +   A      +  
Sbjct: 622 RRLGSQAQTAMSLDEAVASLSAEATAPDLKR 652


>gi|311739567|ref|ZP_07713402.1| threonine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311305383|gb|EFQ81451.1| threonine--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 687

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 40/116 (34%), Gaps = 9/116 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    +     +     LR  GIRA++     +    +++       P  +
Sbjct: 574 WLAPHQVVGIPVADEFSPHLEEVAAQLRQKGIRADVDTSDDR-MQKKIRNHTTGKVPFML 632

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELVST 484
           + G  +     +  + L  G +     +   ++   +W   R  +   P  EL+S 
Sbjct: 633 VAGARDVEADAVSFRFL-DGTQVNGVPVKEAVELIAAWVAERNNEQ--PTEELISA 685



 Score = 40.6 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            GF         +R  + +  RN +   G+  + TP +   D   K     D    G+F
Sbjct: 285 SGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVNTPHITKGDLFKKS-GHLDFYADGMF 342


>gi|303233759|ref|ZP_07320413.1| glycine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302495193|gb|EFL54945.1| glycine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 465

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/226 (5%), Positives = 47/226 (20%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +         K  +       E + + +  ++     ++       +    +        
Sbjct: 240 EWFDYWRNFCKEFLLNLGIREENLRLRDHSQEELSFYSKATTDFEYLFPFGWGELWGIAD 299

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +    +                 +      +V      +         + LE +T
Sbjct: 300 RTDYDLSKHSEGSGEKLEYMDPTTNGKYIPYCIEPSVGVDRMFLSFLCDAYDEEQLEDNT 359

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     +    +  +        K       L             + + G + +  
Sbjct: 360 TRTVLKIHPALAAYKVAVLPLTKKLNDKAMEIYNEL-AKNF--MTHFDDAGSIGKRYRRE 416

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  +           + I+D    ++    ++    +    
Sbjct: 417 DEAGTPYCVTIDFDTLEDNTVTIRDRDTMEQKRMTVEEIIEFVNKE 462


>gi|225560803|gb|EEH09084.1| threonyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 750

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/482 (9%), Positives = 124/482 (25%), Gaps = 64/482 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R+ Y   G+  +++P +   D  + +           +F 
Sbjct: 326 GCPFLLPNGTKIFNALQALLRSEYRKRGYQEVQSPNM--YDVGIWRQSGHWQHYKDDMFK 383

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+       A        +            V    +             
Sbjct: 384 L-DIEKRTWALKPMNCPGHAIMFGHRERSYRELPLRIADFGVLHRNEASGALHGLTRVRK 442

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                +    A+ ++   +    + +         G + +  L    EK     +   N 
Sbjct: 443 FQQDDTHIFCAEDQIMQEIDGLFDFLRAIYG--LFGFSFKLKLSTRPEKYMGKLET-WNN 499

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
               LRA     K     V    G           + A     Q   +     +D +  +
Sbjct: 500 AEDQLRAAMTKFKGNDWEVDEGDGAFYGPKIDVTIQDALKREFQCATI----QLDYQMPV 555

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
           +   E + G    +    E                               +     A   
Sbjct: 556 NFKLEYMTGETGAKAKPEE------------------------------KSAGAPAAKTA 585

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL-ESSTNN 371
                +  KP V  +       +    R +   +             + ++         
Sbjct: 586 DKPAGDAAKPDVPPT----NSDEPGPGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFW 641

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +     +++  M   +D + + Q     L+   +  ++ +  +     +++         
Sbjct: 642 LSPRQILIVPVMPAVNDYVEELQRI---LKEDKLNVDIDISGN-TMQKKIRTGQIAQYNF 697

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             + G  E+S   + I++                   ++     +P+ E  + ++ + +E
Sbjct: 698 IFVVGAEEKSTRTVNIRNRDD--------------PSSQAKGSLVPLEEARAKLRALRKE 743

Query: 492 NK 493
            +
Sbjct: 744 RR 745


>gi|207109770|ref|ZP_03243932.1| threonyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 145

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 26  FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVEVLDKND- 84

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 85  SLNKKVRLAEKQKIPMILVLGNEEMETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 144


>gi|254429307|ref|ZP_05043014.1| threonyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195476|gb|EDX90435.1| threonyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 638

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 70/256 (27%), Gaps = 15/256 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R  + + IR   E  G+  + TP +     L +     D+  + +F++
Sbjct: 263 GSMFWHPKGWRMRQNLENYIRGKMEKGGYQEVSTPQMMDR-ILWEQSGHWDKYGEDMFTV 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + ++++                         +    +R+     G F    + + 
Sbjct: 322 CTHDHKEMAVKPMNCPGHV-------------QIFKQGITSYRDLPIRLGEFTTLFRNEA 368

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI-LEKIGLHGDDKLNE 192
                    A +              I           R++ +    +   +   D+ + 
Sbjct: 369 HGALHGLMRARSFSQDDAHIFCTEEQINEETAGFIKMLREVYEDFGFDSFRIKFSDRPDN 428

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R       DK +      V+ L  E   +       G  L     D +         +  
Sbjct: 429 RAGSDETWDKAEGALRSAVESLGLECELNPGEGAFYGPKLEFVLRDAIGRDWQCGTLQVD 488

Query: 253 HELYELVKGTIAGEKG 268
             L + +      E G
Sbjct: 489 FVLPDRLDAEYVAEDG 504



 Score = 46.8 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/360 (11%), Positives = 98/360 (27%), Gaps = 12/360 (3%)

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH-- 166
           +R+     N   G      + +     +        +       + +  V    +     
Sbjct: 272 WRMRQNLENYIRGKMEKGGYQEVSTPQMMDRILWEQSGHWDKYGEDMFTVCTHDHKEMAV 331

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
             +N    +    + I  + D  +          ++        ++        D++  F
Sbjct: 332 KPMNCPGHVQIFKQGITSYRDLPIRLGEFTTLFRNEAHGALHGLMRAR--SFSQDDAHIF 389

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
                +  E    +     +  +                  G +E    +E   +S   S
Sbjct: 390 CTEEQINEETAGFIKMLREVYEDFGFDSFRIKFSDRPDNRAGSDETWDKAEGALRSAVES 449

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             ++       G  Y     +  +      + +   +    V         V+    +  
Sbjct: 450 LGLECELNPGEGAFYGPKLEF-VLRDAIGRDWQCGTLQVDFVLPDRLDAEYVAEDGSRQR 508

Query: 347 PAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
           P              L + ++S            PV I T+ + +D  +      Q L  
Sbjct: 509 PVMLHRAVLGSLERFLGILIESTAGHLPLWLAPRPVAICTITNSADEYATAVQ--QKLVA 566

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AG+ AE+ +  ++  G +++   R   P   + G  E  +  + I+ L      + ++  
Sbjct: 567 AGVPAELDI-RNEKIGFKVREHSRAKTPRIWVIGEQEAQQNQVAIRTLGSQATETMDLDE 625


>gi|307266972|ref|ZP_07548489.1| glycyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918021|gb|EFN48278.1| glycyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 462

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/253 (11%), Positives = 64/253 (25%), Gaps = 24/253 (9%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +F+    E    EL    K     E          + + + G     ++        L 
Sbjct: 212 GNFIFRTREFEQMELEFFCKPGEDMEWFSYWRKYCMDWLLEFGLKEENLRFRDHKKEELS 271

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----------YDGLVSRFKGQNVPATG 350
           +Y+    +    FP    +   +   +     +          Y   V+  K        
Sbjct: 272 HYSTATTDIEYNFPFGWGELWGIANRTDFDLRQHMEHSGVDLSYMDPVTGEKYIPYCIEP 331

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLI-----------TTMDHDSDSLSKYQMYTQM 399
                  ++  L               V++             +                
Sbjct: 332 SVGVDRLMLAFLIDAYEEEELEDGETRVVLRLHPALAPIKAAVLPLSKKLSENAYKLYDQ 391

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR    +  +    + + G + +  D    P  I       +   + I+D    +++  +
Sbjct: 392 LRN---KFVVDYDETGSIGKRYRRQDEIGTPFCITYDFDSENDHCVTIRDRDTMEQVRIK 448

Query: 460 IKNNESWREARVA 472
           I+  E + E R+ 
Sbjct: 449 IEEVEKYLEERLN 461


>gi|227551759|ref|ZP_03981808.1| proline--tRNA ligase [Enterococcus faecium TX1330]
 gi|227179064|gb|EEI60036.1| proline--tRNA ligase [Enterococcus faecium TX1330]
          Length = 569

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 72/249 (28%), Gaps = 16/249 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E  G   +  P +  ++ L +     +     ++  
Sbjct: 38  GIYSYLPLANRVLEKLKRIMREEFEKIGAVEMLMPAILPAE-LWEESGRYETYGPNLYRF 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG------R 124
           +D + + + L    + T   L R    ++  +      Y+I P +R+EK           
Sbjct: 97  KDRNDRKMILGPTHEETFTDLMRNEINSYKKLP--LNLYQIQPKYRDEKRPRFGLLRGRE 154

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
           F             S +    +      +  +  G++              D        
Sbjct: 155 FIMKDAYSFHATEESLDETYKDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAIS 214

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              +              L+      V     +   +   +  K A    + ID +  F 
Sbjct: 215 EIGEDTICYSTESDYAANLEMATSYYV----SKKSHETQLELEKVATPNVKSIDEVADFF 270

Query: 245 SIDLEKSMH 253
           S++ +K + 
Sbjct: 271 SVEPQKIIK 279



 Score = 36.7 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 36/117 (30%), Gaps = 9/117 (7%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLGSSKNFG 418
                +         + I  M+   +  +     T  L  A    G    +   + +  G
Sbjct: 458 DEQGINWPKGIAPFDLHIVQMNLKDEYQTN---LTNELEEAMTKAGYEVLVDDRNERA-G 513

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            +   +D   CP+ I  G      G++++K    G+ +    +   +     + Q  
Sbjct: 514 VKFADSDLIGCPIRITVGKKAVE-GIVEVKIKKTGEMVEVRKEELANTLPILLNQGE 569


>gi|307595133|ref|YP_003901450.1| prolyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550334|gb|ADN50399.1| prolyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 489

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 74/254 (29%), Gaps = 24/254 (9%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +++              ++       I + +      S R +               V 
Sbjct: 166 FKEAHTAHANREDAERQIKEAMEIYKKIFDYLSIPYLISQRPEWDKFAGAVYTIAFDTVM 225

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                  +         F  V    RY      ++  +  + G S  +   ++A+   + 
Sbjct: 226 PDGKTMQIGTVHYLGTNFSRVF-DVRYLTPSGDWEYVHTTSYGISERVIAAMIAVHGDDK 284

Query: 368 STNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                  + P+ +  +       +   + + +  T+ L  AGIR ++   + K  G +  
Sbjct: 285 GLALPPNVAPIQVVIVPIMYKGTEEAIMREVKSITEELTNAGIRVKVDDRTDKTPGWKYN 344

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           Y +    PL I  G  +     + +                   R   + +   P   +V
Sbjct: 345 YWEMMGVPLRIEIGPKDVENRQVVL------------------ARRDTMEKFVAPREGIV 386

Query: 483 STVKKILQENKEEI 496
            TVK++L    + +
Sbjct: 387 DTVKELLNVINDNM 400



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 4/78 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        +RIR  +   +R +++  G   +  P+    +   K           V
Sbjct: 40  PVKGAYVWRPYGMRIRRLVESYVRLVHDETGHQEVLFPVFIPYEFFSKESEHIRGFENEV 99

Query: 71  FSLQDDDG---QWISLRY 85
           F      G   + + LR 
Sbjct: 100 F-WVSKGGTGEERLVLRP 116


>gi|296139628|ref|YP_003646871.1| threonyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027762|gb|ADG78532.1| threonyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 677

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 12/125 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +     V I   +   D L       + LR  GIRA +     +    +++   
Sbjct: 557 GAFPAWLAPEQVVGIPVAEQFGDHLET---VIRKLRAEGIRAHVDHSDDR-MQKKIRNHT 612

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKEL-SREIKN----NESWREARVAQITIPISE 480
            +  P  ++ G  +R  G +  +    G ++    + +       W  AR  +   P +E
Sbjct: 613 TQKVPFMLLAGERDREAGAVSFR-FRDGTQVNEVPVDDAVQRIVEWVRARRNES--PTAE 669

Query: 481 LVSTV 485
           L+ TV
Sbjct: 670 LLGTV 674


>gi|159901383|ref|YP_001547630.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894422|gb|ABX07502.1| prolyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 570

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 3/105 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--YQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +             V +   D+ S++ +K         L+  G+   +      N GN+
Sbjct: 453 DARGMMLPITVAPYQVHVVGTDYQSNAETKSVADQLYSDLQAQGVTVLLD-DRDVNAGNK 511

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              AD    P+ +I G+     G  ++K  + G+     + +  S
Sbjct: 512 FGDADLIGNPIQVIIGSRGLKNGQAEVKIRSTGETTMVALADLLS 556



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/155 (9%), Positives = 42/155 (27%), Gaps = 12/155 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   +I   IR   +      +  P++  +D L +     +   + +   
Sbjct: 38  GIYSLLPLCVRSTQKISQIIREEMDAIDGQELLMPVVTSAD-LWRETGRYEGVTEELLRF 96

Query: 74  QDDDGQWISLRYDLT-----APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP----GR 124
           +D + + + L  ++T       + R   +++  +       +          G       
Sbjct: 97  KDRNNKDMVL--NMTHEEVVTDIMRRYIKSYRQMPVMVYQIQTKYRDEARPRGGIIRLRE 154

Query: 125 FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
           F               +    ++        +  G
Sbjct: 155 FTMKDAYSFHATIEDLDQYYEQVLNAYKRIYQRCG 189


>gi|167648480|ref|YP_001686143.1| threonyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083602|sp|B0T0Z7|SYT_CAUSK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167350910|gb|ABZ73645.1| threonyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 659

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 87/299 (29%), Gaps = 10/299 (3%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           ++ E     R        G+  V+        D++  F +   +T E    +    S+  
Sbjct: 361 RMAEFGACHRYEPSGAMHGIMRVRA----FTQDDAHIFCREEQVTEESARFIELLRSVYS 416

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY- 307
           +  MH              G + +   +E    +   +    +      G  Y     + 
Sbjct: 417 DLGMHLADTKFSTRPELRAGEDAVWDKAEAALSAAAEAAGETLVLQEGEGAFYGPKLEFS 476

Query: 308 --EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
             +AI         Q   V              S+ +   +           + + L++ 
Sbjct: 477 LKDAIGRVWQCGTLQLDFVLPERLDAEYVAEDGSKKRPVMLHRAILGSFERFIGILLENY 536

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                       V++ T+  D+D     Q   + L + GIRAE+    ++    +++   
Sbjct: 537 AGHLPLWLAPVQVVVATITSDAD--DYAQRVAERLTSMGIRAEVDF-RNEKINYKIREHS 593

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
               P+  + G  E   G + ++ L    +    +++             +     V+ 
Sbjct: 594 LAKVPVIAVVGRKEAENGEVALRRLGGEGQKVLSLEDAVRALTEEATPPDLARDRAVAA 652



 Score = 41.4 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 8/78 (10%), Positives = 28/78 (35%), Gaps = 1/78 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +   +   +R   +  G+  ++TP +       +     ++    +F 
Sbjct: 267 KGMVFWHPKGWTLYLALEAYMRRRLDAAGYREVKTPQILDKSLWERS-GHAEKFGHAMFM 325

Query: 73  LQDDDGQWISLRYDLTAP 90
            +  +G+ ++++      
Sbjct: 326 CESAEGEVLAVKPMNCPG 343


>gi|148543925|ref|YP_001271295.1| prolyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153321|ref|YP_001841662.1| prolyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364834|ref|ZP_03848881.1| prolyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682540|ref|ZP_08162057.1| proline--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166980132|sp|A5VJD4|SYP_LACRD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701303|sp|B2G6V0|SYP_LACRJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148530959|gb|ABQ82958.1| prolyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224665|dbj|BAG25182.1| prolyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070097|gb|EEI08473.1| prolyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978379|gb|EGC15329.1| proline--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 577

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 20/128 (15%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             ++I      +I       D ++      Q L  AG    +     +  G +   +D  
Sbjct: 467 WPDSIAPFDVHVIPVNAKKEDQMAMADKIDQQLTEAGYEVLVDDRKERA-GVKFADSDLI 525

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P+ +  G      G+++IK    G+                   + +   ELV+TV  
Sbjct: 526 GIPIRVTVGKK-AQDGIVEIKIRKTGE------------------TVEVKQEELVNTVGI 566

Query: 488 ILQENKEE 495
           +L++  EE
Sbjct: 567 LLKQLNEE 574



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+  ++ + IR+  +  G   +  P L  +D L K     +     +F L+D  
Sbjct: 42  YLPLAYRVIRKVENIIRDEMDKAGAVEMLMPGLLPAD-LWKESGRYESYGDNLFKLKDRR 100

Query: 78  GQWISLRY 85
            +   L  
Sbjct: 101 DRDFILGP 108


>gi|326926536|ref|XP_003209455.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like,
           partial [Meleagris gallopavo]
          Length = 635

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 37/116 (31%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G     K + V      +G    ++A+ +          + P  +  +     S   
Sbjct: 486 TYVGKDGDDKKRPVIIHRAVLGSVERMIAILAENYGGKWPFWLSPRQVMVVPVGPTSEGY 545

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q        AG   ++ L  S     +++ A        ++ G  E++   + ++
Sbjct: 546 AQQVCTEFFEAGFMTDVDLDQSCTLNKKIRNAQLAQYNFILVVGEKEKANHAVNVR 601



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N + D IR  Y    F  + +P + ++  L +        ++ +FS  D +
Sbjct: 324 FLPRGAFLYNTLTDFIREEYHKRNFTEVVSPNI-FNSKLWETSGHWQHYSENMFSF-DIE 381

Query: 78  GQWISLRYDLTAPLARYVAEN 98
            +  +L+           A  
Sbjct: 382 KETFALKPMNCPGHCLMFAHR 402


>gi|189182913|ref|YP_001936698.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|189179684|dbj|BAG39464.1| prolyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 433

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 67/242 (27%), Gaps = 12/242 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G  +     I++   I D +R          +  P ++ + SL K     +  
Sbjct: 31  MIKQACAGIYNWLPLGIKVLQNIQDIVRKNMNAAQCIELLMPCIQPA-SLWKESSRYNAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +  ++D     +       +L   + R   +++  +       +         R   
Sbjct: 90  GKEMLKIKDRHDNDLLFGPTNEELITDIFRSSIQSYKDLPKNFYHIQWKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR-KILDGI 178
                F        D   +SA  +   M +      + +G+K              L   
Sbjct: 150 MRSREFIMKDAYSFDIDQASAIQSYNLMYLTYLKIFKDLGLKVIPVQADNGAIGGKLSHE 209

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
              I   GD K+          D      L  ++ L            T    ++++ I 
Sbjct: 210 FHIITATGDSKIYYDSTKFNPFDYNQDLSLNKLEQL---YIVTEDKHKTDQNQISNDTIS 266

Query: 239 IM 240
            +
Sbjct: 267 TI 268


>gi|209364247|ref|YP_001425332.2| prolyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|207082180|gb|ABS76694.2| prolyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 566

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ D +R      G   +  P+++ + SL +     +  
Sbjct: 33  MLRKLASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPA-SLWQESGRWEAY 91

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  + D             ++   +AR   +++  +       +  
Sbjct: 92  GAELLRIMDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTK 140



 Score = 36.7 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 5/109 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSK-NFGN 419
                          + +  ++           +     L  AG   E+     K   G 
Sbjct: 460 DERGIIWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGY--EVLWDDRKERPGV 517

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                D    P  ++       RG+++ K     +  +  ++N  S   
Sbjct: 518 MFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 566


>gi|3617770|emb|CAA74705.1| threonyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 709

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/128 (9%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+  +            ++  +     S    +   + ++ AG  
Sbjct: 584 HRAVLGSVERMFAILLEHYKGKWPFWISPRQAIVCPIS--EKSQQYAEKVQKQIKDAGFY 641

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            +  L + +    +++ A        ++ G  E + G + ++         + I++    
Sbjct: 642 VDADL-TDRKIDKKVREAQLAQYNYILVVGETEAATGQVSVRVRDNAAHSVKSIEDLLEE 700

Query: 467 REARVAQI 474
            +A+ A+ 
Sbjct: 701 FKAKTAEF 708



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              +L  G         R+ NR++D I+N Y + G+  + TP +   + L +     D  
Sbjct: 328 FSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTEVITPNMYNME-LWQTSGHADNY 386

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
              +F+   +  Q   L+      
Sbjct: 387 KDNMFTFNIEK-QEFGLKPMNCPG 409


>gi|325269899|ref|ZP_08136509.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324987872|gb|EGC19845.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 649

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 3/133 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +                L    +R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYAFKVKAYLDAHNVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           + M    ++  G +++  + +  P  +I G  E + G++ ++    G++ +  ++     
Sbjct: 578 SIMD-DRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTMEAFAER 636

Query: 467 REARVAQITIPIS 479
             A VA     + 
Sbjct: 637 INAEVADQLKTLD 649


>gi|239905697|ref|YP_002952436.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|259516431|sp|C4XL11|SYT_DESMR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239795561|dbj|BAH74550.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 647

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 42/116 (36%), Gaps = 5/116 (4%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +  +   ++   D   +   +       L+ AGIR E+    ++  G +++ A 
Sbjct: 530 GALPTWLSPVQARILIVTDAQKEFAEQALA---RLKEAGIRVELD-DRNEKLGFKVREAQ 585

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
               P  ++ G  E+  G L ++ L  G+ L  +  +  +       Q       +
Sbjct: 586 VEKIPYMLVAGDKEKELGGLNVR-LRSGENLGVKTLDEVALMITADCQEPFKRGGM 640



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 9/105 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I D  R  +   G+D +  PL+   +   +     D   + ++  
Sbjct: 262 GMCIWHPKGELIRTIIEDFERREHLRRGYDLVRGPLILRRELWERS-GHYDNYRENMY-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            + D Q   ++             +        R+YR  P    E
Sbjct: 320 TEIDEQSYGIKPMN-------CLSHMLIYKSRVRSYRDLPQRYFE 357


>gi|309378779|emb|CBX22605.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 637

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAARLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIA-DALVNH 637



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 261 GMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|212213390|ref|YP_002304326.1| prolyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212011800|gb|ACJ19181.1| prolyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 566

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ D +R      G   +  P+++ + SL +     +  
Sbjct: 33  MLRKLASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPA-SLWQESGRWEAY 91

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  + D             ++   +AR   +++  +       +  
Sbjct: 92  GAELLRIMDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTK 140



 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 5/109 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSK-NFGN 419
                          + +  ++           +     L  AG   E+     K   G 
Sbjct: 460 DERGIIWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGY--EVLWDDRKERPGV 517

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                D    P  ++       RG+++ K     +  +  ++N  S   
Sbjct: 518 MFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 566


>gi|159036441|ref|YP_001535694.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157915276|gb|ABV96703.1| threonyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 405

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 5/119 (4%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D   +R +   V  +            ++  E +         +++  +    DS ++  
Sbjct: 262 DSGGARRRPVMVHRSLVGSMERLFGYLIEVHEGTFPAWYAPVQLVVLPIAAGQDSAAETF 321

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                   AG+RAE+    + + G +++ A R   P A + G  E + G + ++ L  G
Sbjct: 322 AAAGQ--AAGLRAEVH--RNGSLGGRIREAARARIPYAAVVGPREAAVGQVSLR-LRDG 375



 Score = 41.4 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 21/75 (28%), Gaps = 6/75 (8%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF-- 71
          G           R+ + + IR +    G   + TP L   +   +     D     +F  
Sbjct: 23 GLPLWLPAGAAARHAVEEYIRELERQAGHQHVLTPPLGKRELF-ELSGHLDFFADDMFPP 81

Query: 72 -SLQDDDGQWISLRY 85
            L         LR 
Sbjct: 82 MRLS--ADDEFVLRP 94


>gi|58584729|ref|YP_198302.1| threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|73919844|sp|Q5GSG4|SYT_WOLTR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58419045|gb|AAW71060.1| Threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 632

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 15/303 (4%)

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
                  + +I +             + E  +  R        GL  V+        D++
Sbjct: 328 KPMNCPCHVQIFNSYTRSYRNLPIR-MAEFGMCHRNESSGSLHGLMRVRG----FTQDDA 382

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
             F     + SE +        +  E   +E+            G NE+   +E      
Sbjct: 383 HIFCMEEQVNSETVKFCALLKEVYSELGFNEISVKFSDRPNVRAGDNEVWDRAEKALLEA 442

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLV 338
                +        G  Y     +   +    +    +              G  Y G  
Sbjct: 443 VKEAGLSYELNPGEGAFYGPKLEF---ILKDAIGRSWQCGTLQVDFILPERLGAFYIGAD 499

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            +     +          R I  L    +    +  + P  +  +   +++ +     + 
Sbjct: 500 GQKYHPVMLHRAILGTFERFIGILIEHYAGKFPLW-LAPTQLVILTVTNEADNYATEISN 558

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           +L+  G+R +  L + K    +++       P+  I G  E +   + +++L   K+ S 
Sbjct: 559 VLKEQGVRVKTDLTNEK-VSYKIRLHSSNKVPILWIVGKNEVASKTVSVRNLGSEKQESS 617

Query: 459 EIK 461
             +
Sbjct: 618 SCE 620



 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 30/255 (11%), Positives = 68/255 (26%), Gaps = 15/255 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N +   IR    N G+  ++TP+L   +   K     D+  + +F + + +
Sbjct: 263 WHEQGYTLYNVLESYIRKKLINNGYAEVKTPILVSKELWEKS-GHWDKFRENMFIVDESE 321

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++               +              +RN       F    + +     
Sbjct: 322 SKKLAIKP-------------MNCPCHVQIFNSYTRSYRNLPIRMAEFGMCHRNESSGSL 368

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI-LEKIGLHGDDKLNERLIV 196
                                 +           +++   +   +I +   D+ N R   
Sbjct: 369 HGLMRVRGFTQDDAHIFCMEEQVNSETVKFCALLKEVYSELGFNEISVKFSDRPNVRAGD 428

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELY 256
               D+ +K  L+ VK        +       G  L     D +         +    L 
Sbjct: 429 NEVWDRAEKALLEAVKEAGLSYELNPGEGAFYGPKLEFILKDAIGRSWQCGTLQVDFILP 488

Query: 257 ELVKGTIAGEKGFNE 271
           E +     G  G   
Sbjct: 489 ERLGAFYIGADGQKY 503


>gi|30690426|ref|NP_198035.2| threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)
           [Arabidopsis thaliana]
 gi|27735258|sp|O04630|SYTM_ARATH RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; Flags:
           Precursor
 gi|332006227|gb|AED93610.1| threonyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 709

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/128 (9%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+  +            ++  +     S    +   + ++ AG  
Sbjct: 584 HRAVLGSVERMFAILLEHYKGKWPFWISPRQAIVCPIS--EKSQQYAEKVQKQIKDAGFY 641

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            +  L + +    +++ A        ++ G  E + G + ++         + I++    
Sbjct: 642 VDADL-TDRKIDKKVREAQLAQYNYILVVGETEAATGQVSVRVRDNAAHSVKSIEDLLEE 700

Query: 467 REARVAQI 474
            +A+ A+ 
Sbjct: 701 FKAKTAEF 708



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              +L  G         R+ NR++D I+N Y + G+  + TP +   + L +     D  
Sbjct: 328 FSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTEVITPNMYNME-LWQTSGHADNY 386

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
              +F+   +  Q   L+      
Sbjct: 387 KDNMFTFNIEK-QEFGLKPMNCPG 409


>gi|325298803|ref|YP_004258720.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318356|gb|ADY36247.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 647

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/373 (9%), Positives = 91/373 (24%), Gaps = 26/373 (6%)

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
           ARY  +         +   +      +             + +              +  
Sbjct: 287 ARYDYQEVMCPPIGNKLLYVTSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYR 346

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
                         +  +  R    G + +    G+     R+      D         V
Sbjct: 347 N---------SPRSYRDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQV 397

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           K          S  F        E    +   ++ +      E +E  +  I        
Sbjct: 398 KDEFLRVMDIISIVFKSMNFENFEAQISLRDKVNREKYIGSDENWEKAEQAIVEACQEKG 457

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L    E    +             +             I     + E+ +    G+    
Sbjct: 458 LKAKVEYGEAAF-----YGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGADN-- 510

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
                   + +   +    F      + V ++              V +  +    +  +
Sbjct: 511 -------QKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPDQVAVLPISEKFNEYA 563

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                   L+   IRA +    ++  G +++  + ++ P  +I G  E + G + ++   
Sbjct: 564 DQVRL--ELKKYDIRALVD-DRNEKIGRKIRDNEMKHIPYMLIVGEKEAANGEVSVRKQG 620

Query: 452 KGKELSREIKNNE 464
           +G + + +I+   
Sbjct: 621 EGDKGTVKIEEFA 633


>gi|145529361|ref|XP_001450469.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418080|emb|CAK83072.1| unnamed protein product [Paramecium tetraurelia]
          Length = 769

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/485 (9%), Positives = 119/485 (24%), Gaps = 52/485 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G A        I N +++ +R  Y   G+  + +P + ++  L K     D+  + 
Sbjct: 183 QLSPGSAFFYPSGAHIYNTLMNFLRRQYYIRGYQEVISPNI-FNAQLWKISGHYDKYKEN 241

Query: 70  VFSLQDDDGQ-WISLRYDLTAPL---------------ARY----VAENFDTIVFPCRTY 109
           +F   +   +    L+                       R+    V    +         
Sbjct: 242 LF-FINMGEEGEYGLKPMNCPGHCLMFDMIQHSYRDLPVRFADFGVLHRNEVHGALSGLT 300

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
           R+    +++ H   R  Q  +     +   +                          +  
Sbjct: 301 RVRRFQQDDAHIFCRMDQIQEEIKSCLDFLSYIYSLFGFEFKLYLSTRPEKFLGTKEVWD 360

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK------------------FGLQGV 211
           N    L+  L+K G   +    +       ID                           +
Sbjct: 361 NAEYQLEQGLKKFGKPFEVNPGDGAFYGPKIDVKLYDAYKREHQCGTIQLDFNLPERFNL 420

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           +    E   +   D  +  N   +    ++  +      S  +           +   + 
Sbjct: 421 QYRASEDVQEVQQDKEQLHNEQVQAAQEIIDVVRKASHHSDTDNITTAPQNSQQQPAEDP 480

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           +   +   +       + +      +  + +        +     ++         V   
Sbjct: 481 VQEKAPQEQNVKKQKKQKQQKEPQQQQQDQHKKQKLPEDIIESGSSQGLSQHELHKVLHE 540

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV---LITTMDHDSD 388
            +Y+      K            I   +  + ++ +     K    +    +      + 
Sbjct: 541 KKYELGYHHLKAGFARPVIVHRAILGSLERMIAVLTEQCGGKWPFWLSPKQLVLCPVSAY 600

Query: 389 SLSKYQMYTQMLRTAGIRA---EMFLGSSKNFG-NQLKYADRRNCPLAIIQGTGERSRGM 444
                +     LR  G      E     +K     Q++Y          + G  E   G+
Sbjct: 601 YKDVAEKIAARLRLEGYTVTTDEADQTLAKKVRNAQIQY-----FNFVGVIGEEEVKAGV 655

Query: 445 LQIKD 449
           + ++D
Sbjct: 656 IDVRD 660


>gi|115315107|ref|YP_763830.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|122324891|sp|Q0BL41|SYT_FRATO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|115130006|gb|ABI83193.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
          Length = 634

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/449 (12%), Positives = 113/449 (25%), Gaps = 91/449 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI  ++ D +R     YG   I TPL+       K        +K     
Sbjct: 260 GIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSG----HASK----- 310

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                 AEN                 ++E              V
Sbjct: 311 ---------------------YAENM-------------FATKSENRDFAIRPMNCPTCV 336

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       M    +          H  +  R                +    
Sbjct: 337 QVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVI 396

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG     + +     +  GD                       +++  
Sbjct: 397 LMVQQCFEVYKDFGFNDFAVKIALRPENRIGD-----------------------DETWD 433

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL                  +   I R  +  T  +       
Sbjct: 434 KSEQILKNALDANNVSYEL---FPGEGAFYGPKIEFHLKDAIGRSWQCGTIQL------- 483

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D    +     +           + + ++    +     
Sbjct: 484 --------DFSMPQRLGATYIDKNGEKQVSVMLHRAIVGSLERFIGMLIEHYAGNLPLW- 534

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M   ++     +    ML   GIRA++ L  ++  G +++       P  +
Sbjct: 535 -LAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDL-RNEKIGFKIREHTLLRVPYLV 592

Query: 434 IQGTGERSRGMLQIKDLAKGK---ELSRE 459
           I G  E+ + ++ I+    G+   ++S +
Sbjct: 593 ILGKNEQEQKIITIRK-HSGEDLGQMSVD 620


>gi|269214426|ref|ZP_05986526.2| threonine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209844|gb|EEZ76299.1| threonine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 643

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 541 WLAPVQMVIMNITENQADYCREVAARLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 600 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIA-DALVNH 643



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 267 GMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 324

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 325 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 376


>gi|197118372|ref|YP_002138799.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690868|sp|B5EBX9|SYT_GEOBB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|197087732|gb|ACH39003.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 636

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV  T +    + +   Q     LR AGIR +     ++  G +++ A  +  P  +
Sbjct: 536 WLAPVQATIVTVTDNQIPYAQAAFDKLRAAGIRVQKDF-RNEKLGFKIREAQLQKIPYML 594

Query: 434 IQGTGERSRGML 445
           + G  E   GML
Sbjct: 595 VVGDKEVESGML 606


>gi|18977665|ref|NP_579022.1| prolyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|74580758|sp|Q8U1C4|SYP_PYRFU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|18893393|gb|AAL81417.1| prolyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 479

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 76/248 (30%), Gaps = 27/248 (10%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             E +         E+   E + I + + K    +  I       +    Y     E ++
Sbjct: 158 FFEAHTAHADFEDAERQIKEDLEIFDNLMKKLAIAYVISKRPEWDKFPGAYYSLGAEVVM 217

Query: 312 GFPVMNEKQKPVVFGSVGGGGR---YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                 +      +           Y+         +    G S  +   ++A+   +  
Sbjct: 218 PDGRTLQIGTMHNYKQNFAKAYNILYEKEDGTHDYVHQTTFGMSERLLAAVIAIHGDDRG 277

Query: 369 TNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                 + P+ +  +       + +  S  +   + L+ AGIR  + L   K  G +   
Sbjct: 278 MVLPPTIAPIQVVIVPIPKKGSEEEVYSYAREIEEELKLAGIRVHLDL-RDKRPGWKFYD 336

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  P+ I  G  + +   + +                   R  ++ +IT+   ELV 
Sbjct: 337 WELKGVPVRIEVGPRDAAEKTVVL------------------ARRDKLEKITVSREELVD 378

Query: 484 TVKKILQE 491
            V+++  +
Sbjct: 379 KVRELFDD 386


>gi|332184284|gb|AEE26538.1| Threonyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 634

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/449 (11%), Positives = 112/449 (24%), Gaps = 91/449 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI  ++ D +R     YG   I TPL+       K        +K     
Sbjct: 260 GIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWEKSG----HASK----- 310

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                 AEN                 ++E              V
Sbjct: 311 ---------------------YAENM-------------FATKSENRDFAIRPMNCPTCV 336

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       M    +          H  +  R                +    
Sbjct: 337 QVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVI 396

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG     + +     +  GD                       +++  
Sbjct: 397 LMVQQCFEVYKDFGFNDFAVKIALRPENRIGD-----------------------DETWD 433

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL+                 +   I R  +  T  +       
Sbjct: 434 KSEQMLKNALDANNVSYELLPGEG---AFYGPKIEFHLKDAIGRSWQCGTIQL------- 483

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D    +     +           + + ++    +     
Sbjct: 484 --------DFSMPQRLGATYIDKNGDKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLW- 534

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  M   ++     +    ML   GIR ++ L  ++  G +++       P  +
Sbjct: 535 -LAPFQVAVMGISNNQDDYCKEVFTMLEKNGIRTKLDL-RNEKIGFKIREHTLLRVPYLV 592

Query: 434 IQGTGERSRGMLQIKDLAKGK---ELSRE 459
           I G  E+ + ++ I+    G+   ++S +
Sbjct: 593 ILGKNEQEQKIITIRK-HSGEDLGQMSVD 620


>gi|254881560|ref|ZP_05254270.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294778842|ref|ZP_06744259.1| threonine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|254834353|gb|EET14662.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294447295|gb|EFG15878.1| threonine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 646

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/438 (10%), Positives = 109/438 (24%), Gaps = 40/438 (9%)

Query: 62  DEDRPNKGV--FSLQDDDGQWISLR---YDLTAPLARY--VAENFDTIVFPCRTYRIGPV 114
           D  +  K +  F   D  G+   L       TA   R                       
Sbjct: 242 DHRKIGKEMDLFMFTDMVGK--GLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
            +N     G + ++ +     + +  E  +  +  M       +       +  +  R  
Sbjct: 300 NKNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIA 359

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
             G + +    G+     R+      D         VK         +  +    +    
Sbjct: 360 EFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVM--DIINIVFKSMNFE 417

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +     ++ EK +       K   A  +   E        +     +        
Sbjct: 418 NVEAQISLRDKVNREKYIGSDENWEKAEQAIIEACEE---KGLTAKVEYGEAAFYGPKLD 474

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            +             I     + E+ +    GS            + +   +    F   
Sbjct: 475 FMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDN---------QKHRPVMIHRAPFGSM 525

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              + V ++              V I  +          +     LR   +RA +    +
Sbjct: 526 ERFVAVLIEHTAGKFPLWLTPDQVAILPIS--EKFNEYAEQVKAELRKFDVRAIVD-DRN 582

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +  G +++  + +  P  +I G  E   G + ++   +G + + +I+             
Sbjct: 583 EKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEEFGK--------- 633

Query: 475 TIPISELVSTVKKILQEN 492
                 L   V  ++ + 
Sbjct: 634 -----NLAEEVSNMINKW 646


>gi|256832610|ref|YP_003161337.1| threonyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686141|gb|ACV09034.1| threonyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 673

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 58/449 (12%), Positives = 126/449 (28%), Gaps = 65/449 (14%)

Query: 66  PNKGVFSLQDDDGQWISL-RYDLTAPLARYVAE------NFDTIVFPCRTYRIGPVFRNE 118
               +FS  D+ G  +++        + R   E      + +       +  I      E
Sbjct: 269 VEMDLFSFPDEMGSGLAVFHPRG--GVVRLEMEEYSRRRHIEAGYSFVNSPHITKGRLYE 326

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG- 177
             G   + +       ++    +             L+ +    ++       R   +  
Sbjct: 327 VSGHLDWYREGMYPAMHMDEERDADGTLRKQGQDYYLKPMNCPMHNLIFDARGRSYRELP 386

Query: 178 --ILEKIGLHGDDKLNERLIVLRAI-----DKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
             + E   ++  +K      + RA      D       + +K  L    T    D  K  
Sbjct: 387 LRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTKEQMKDELTNALTFVL-DLLKDY 445

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE--LVVISELV-RKSGYNSN 287
            L     D  +   + D EKS+       + T   E+   +  L ++ +           
Sbjct: 446 GLD----DFYLELSTRDPEKSVGTDEIWDEATRTLEEVAQDSGLELVPDPGGAAFYGPKI 501

Query: 288 RIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
            ++    I R  +  T    +     F +  +         V                 +
Sbjct: 502 SVQAKDAIGRTWQMSTIQLDFNLPEKFDLEYQAADGTRQRPVM----------------I 545

Query: 347 PATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
               F        V L+         +  +  + +   D  +D L     +   LRT G+
Sbjct: 546 HRALFGSIERFFAVLLEHYAGQFPVWLAPVQVLAVPVADAFNDYLGD---FVAELRTRGV 602

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           RAE+   S + F  +++ A     P  +I G  +   G +  +    G + +        
Sbjct: 603 RAELDDSSDR-FPKKVRNASTSKVPFTVIAGGEDEQAGAVSFRY-RDGSQENG------- 653

Query: 466 WREARVAQITIPISELVSTVKKILQENKE 494
                     IP  + ++ + + +    +
Sbjct: 654 ----------IPREQAITRILESISTRAQ 672


>gi|150006539|ref|YP_001301283.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|319642944|ref|ZP_07997580.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|166223322|sp|A6L7J7|SYT_BACV8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|149934963|gb|ABR41661.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|317385492|gb|EFV66435.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 646

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/438 (10%), Positives = 109/438 (24%), Gaps = 40/438 (9%)

Query: 62  DEDRPNKGV--FSLQDDDGQWISLR---YDLTAPLARY--VAENFDTIVFPCRTYRIGPV 114
           D  +  K +  F   D  G+   L       TA   R                       
Sbjct: 242 DHRKIGKEMDLFMFTDMVGK--GLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
            +N     G + ++ +     + +  E  +  +  M       +       +  +  R  
Sbjct: 300 NKNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIA 359

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
             G + +    G+     R+      D         VK         +  +    +    
Sbjct: 360 EFGTVCRYEQSGELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVM--DIINIVFKSMNFE 417

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
                +     ++ EK +       K   A  +   E        +     +        
Sbjct: 418 NVEAQISLRDKVNREKYIGSDENWEKAEQAIIEACEE---KGLTAKVEYGEAAFYGPKLD 474

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
            +             I     + E+ +    GS            + +   +    F   
Sbjct: 475 FMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDN---------QKHRPVMIHRAPFGSM 525

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
              + V ++              V I  +          +     LR   +RA +    +
Sbjct: 526 ERFVAVLIEHTAGKFPLWLTPDQVAILPIS--EKFNEYAEQVKAELRKFDVRAIVD-DRN 582

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +  G +++  + +  P  +I G  E   G + ++   +G + + +I+             
Sbjct: 583 EKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRKQGEGDKGTMKIEEFGK--------- 633

Query: 475 TIPISELVSTVKKILQEN 492
                 L   V  ++ + 
Sbjct: 634 -----NLAEEVSNMINKW 646


>gi|194366578|ref|YP_002029188.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|238693469|sp|B4SQH4|SYT_STRM5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|194349382|gb|ACF52505.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 633

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/144 (7%), Positives = 33/144 (22%), Gaps = 2/144 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y   G+  +  P +       K     D     +F  
Sbjct: 262 GLVFWHPKGWALWQVVEQYMRKVYRKTGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+        +   +   +       Y         +              
Sbjct: 320 TESEKRTYALKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGILRVRGF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEA 157
                     + ++   +    + 
Sbjct: 380 TQDDGHVFCTENQVEAEVTAFHQQ 403



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R +  L    +       + P  +   +      
Sbjct: 494 GAEYVDENSQKKHPVMLHRAIVGSMERFLGILIEHHAGQFP-AWLAPTQVVVANITDAQA 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                 T+ L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++  
Sbjct: 553 EYVSDVTKTLADQGFRVSADL-RNEKIGYKIREHTLQRVPYLLVIGDREKENGAVAVRT- 610

Query: 451 AKGK 454
             G+
Sbjct: 611 RSGE 614


>gi|71066652|ref|YP_265379.1| threonyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123775558|sp|Q4FPW3|SYT_PSYA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71039637|gb|AAZ19945.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychrobacter
           arcticus 273-4]
          Length = 644

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/359 (8%), Positives = 90/359 (25%), Gaps = 12/359 (3%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD-----NVGSSAETADAEMCMMMA 152
           +          +        +       +       +      +   +    +      A
Sbjct: 254 HMQEQAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYEEIKTPQIVDRSLWERSGHWGNYA 313

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
             +     ++ DY +   N      +  +      D                   L G+ 
Sbjct: 314 TNMFTTSSEKRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F   + +  E  D +   L++  +   + +   +        G +E 
Sbjct: 373 MRVRGFTQDDAHIFCTQSQIQQEVADFIKLTLAVYEDFGFNNIIMKLSTRPEKRVGSDES 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVG 329
              +E       +++ +  +     G  Y     +        + +              
Sbjct: 433 WDFAEKALADALDNSGLDWAYLPGEGAFYGPKIEFSLKDSLGRVWQCGTIQVDPNMPERL 492

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
                +    R     +           + + +++               +  M+     
Sbjct: 493 DAEFVNEQNEREVPIMLHRAILGSFERFIGILIENYAGWMPVWLAPQQ--VVVMNITDKQ 550

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +     L+ +G+RA   L  ++  G +++       P  ++ G  E   G + ++
Sbjct: 551 AEACENVVNELKKSGLRAISDL-RNEKIGFKIREKTLERIPYMLVLGDKEVESGSVNVR 608



 Score = 41.4 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 11/149 (7%), Positives = 41/149 (27%), Gaps = 3/149 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R + ++ G++ I+TP +       +        
Sbjct: 255 MQEQAP-GMVFWHANGWTIYQVLEQYMRKVQQDNGYEEIKTPQIVDRSLWERS-GHWGNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 313 ATNMFT-TSSEKRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 371

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTL 155
                      +      +++   +AD +
Sbjct: 372 LMRVRGFTQDDAHIFCTQSQIQQEVADFI 400


>gi|68536143|ref|YP_250848.1| threonyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|123748238|sp|Q4JVC7|SYT_CORJK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|68263742|emb|CAI37230.1| thrS [Corynebacterium jeikeium K411]
          Length = 691

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 12/128 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +     V I   D  ++ L     +   LR  GIRAE+     +    +++   
Sbjct: 571 GAFPAWLAPHQVVGIPVADEFNEYLEN---FAADLRAQGIRAEVDTSDDR-MQKKIRNHT 626

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKEL-----SREIKNNESWREARVAQITIPISE 480
               P  ++ G  +     +  + L  G ++        ++   +W   R      P SE
Sbjct: 627 TGKVPFMLLVGGRDVEANAVSFRFL-DGTQVNGVPREDALRIISNWIAERRNDQ--PSSE 683

Query: 481 LVSTVKKI 488
           L+  + ++
Sbjct: 684 LIQPLVEV 691



 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            GF         +R  + +  R  +   G+  + TP +   D   K     D    G+F
Sbjct: 287 SGFPVFHPDGGIVRLEMEEHSRKRHIASGYSFVNTPHVTKGDLFQKS-GHLDFYADGMF 344


>gi|294811598|ref|ZP_06770241.1| Threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294324197|gb|EFG05840.1| Threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 719

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/394 (10%), Positives = 92/394 (23%), Gaps = 32/394 (8%)

Query: 90  PLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
            + R V E                     +           +    +          D  
Sbjct: 349 GIVRRVMEDYSRKRHEEEGYEFVYTPHATKGTLFEKSGHLDWYAEGMYPPMQLDGGTDYY 408

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  M       +   R   +  +  R    G + +    G      R       D     
Sbjct: 409 LKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRHEKSGVVHGLTRARGFTQDDAHIYC 468

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
             + +   L     D +  F           D  +   + D EK +       + T    
Sbjct: 469 TREQMAEEL-----DRTLTFVLNLLRDYGLTDFYLELSTKDPEKYVGSDETWEEATEVLR 523

Query: 267 KGFNELVVISELV---RKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKP 322
           +   +  +                 ++    I R  +  T    +     F +       
Sbjct: 524 RVAEKQGLPLTPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFNLEYTAPDG 583

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                V                 +    F        V L+    +      + PV    
Sbjct: 584 SRQRPVM----------------IHRALFGSIERFFAVLLEHYAGAMPPW--LAPVQAVG 625

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +      +   Q +    +  G+R ++   S +    +++   +   P  II G  + + 
Sbjct: 626 IPIGDAHIEYLQSFAAEAKKRGLRVDVDASSDR-MQKKIRNHQKLKVPFMIIVGDEDMNA 684

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           G +  +    G + +   ++    +  +V    +
Sbjct: 685 GTVSFRY-RDGSQENGIPRDAALAKLEQVVADRV 717


>gi|254522893|ref|ZP_05134948.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219720484|gb|EED39009.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 633

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/144 (7%), Positives = 33/144 (22%), Gaps = 2/144 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y   G+  +  P +       K     D     +F  
Sbjct: 262 GLVFWHPKGWALWQVVEQYMRKVYRKTGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+        +   +   +       Y         +              
Sbjct: 320 TESEKRTYALKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGILRVRGF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEA 157
                     + ++   +    + 
Sbjct: 380 TQDDGHVFCTENQVEAEVTAFHQQ 403



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R +  L    +       + P  +   +      
Sbjct: 494 GAEYVDENSQKKHPVMLHRAIVGSMERFLGILIEHHAGQFP-AWLAPTQVVVANITDAQA 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                 T+ L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++  
Sbjct: 553 EYVSGVTKTLAEQGFRVSSDL-RNEKIGYKIREHTLQRVPYLLVIGDREKENGAVAVRT- 610

Query: 451 AKGK 454
             G+
Sbjct: 611 RSGE 614


>gi|253700848|ref|YP_003022037.1| threonyl-tRNA synthetase [Geobacter sp. M21]
 gi|259516486|sp|C6DYJ5|SYT_GEOSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|251775698|gb|ACT18279.1| threonyl-tRNA synthetase [Geobacter sp. M21]
          Length = 636

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV  T +    + +   Q     LR AGIR +     ++  G +++ A  +  P  +
Sbjct: 536 WLAPVQATIVTVTDNQIPYAQAAFDKLRAAGIRVQKDF-RNEKLGFKIREAQLQKIPYML 594

Query: 434 IQGTGERSRGML 445
           + G  E   GML
Sbjct: 595 VVGDKEVESGML 606


>gi|308805817|ref|XP_003080220.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116058680|emb|CAL54387.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 673

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 1/117 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R+   L    +           ++     DS S        +MLR  G   E+   S +
Sbjct: 546 ERMFGILTEHFAGKWPFWLSPKQVMIVPISDSASGEYCMEVKRMLRKEGFHVEVD-NSDR 604

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +++ A        ++ G  E+    + ++          ++++  +      +
Sbjct: 605 KMQKKVREAQLEQFNYILVCGESEKVNRTVNVRTRDNKVHGEHKVEDLITVLNKERS 661


>gi|157803434|ref|YP_001491983.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166225493|sp|A8EXW5|SYT_RICCK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157784697|gb|ABV73198.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 635

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 70/254 (27%), Gaps = 4/254 (1%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +T E +        +  +    ++            G +E+   +E   
Sbjct: 381 DDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEIRAGSDEVWDKAENAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           K          +     G  Y     +  +        +   +    V         V+ 
Sbjct: 441 KEAVEKAGFTYTLNPGEGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLLEQLDASYVAA 499

Query: 341 FKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +  P       +G     + +   E +      + PV +      SD         +
Sbjct: 500 SGEKKRPVMLHRAILGSLERFIGILIEEYAGCFPLWLAPVQVAIATITSDLNDYALAVQK 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L   G+R ++ +   K    +++       PL  I G  E+    + I+ L    +   
Sbjct: 560 ALIDNGVRTDINISPDK-INYKIREFSNHKVPLIAIIGKKEKENKQVTIRRLGTTDQQVL 618

Query: 459 EIKNNESWREARVA 472
            +K   +      +
Sbjct: 619 SVKQLITLISEENS 632



 Score = 42.5 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N +   IR      G+  ++TP+L     L +     ++    +F+L
Sbjct: 261 GMVFWHDKGWSIYNIVEQYIRKKIRKNGYTEVKTPVLVDKR-LWEASGHWEKFRDNMFAL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 E-ADNKILALKPMNCP 334


>gi|85858497|ref|YP_460699.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85721588|gb|ABC76531.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 645

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +   +   Q L  AGIR E     ++  G +++ A  +  P  +
Sbjct: 545 WLAPVQAILLSVTDRHIPYGKTVYQQLMDAGIRVEGDF-RNEKLGYKIREAQTQKIPYML 603

Query: 434 IQGTGERSRGMLQIK 448
           + G  E + G + ++
Sbjct: 604 VIGDKEMASGEVAVR 618


>gi|89256700|ref|YP_514062.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|156502860|ref|YP_001428925.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010452|ref|ZP_02275383.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368007|ref|ZP_04984027.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|290954131|ref|ZP_06558752.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312449|ref|ZP_06803221.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|122999730|sp|Q2A2J0|SYT_FRATH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166223341|sp|A7NDB6|SYT_FRATF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|89144531|emb|CAJ79846.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|134253817|gb|EBA52911.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|156253463|gb|ABU61969.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 634

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/449 (12%), Positives = 113/449 (25%), Gaps = 91/449 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI  ++ D +R     YG   I TPL+       K        +K     
Sbjct: 260 GIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSG----HASK----- 310

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                 AEN                 ++E              V
Sbjct: 311 ---------------------YAENM-------------FATKSENRDFAIRPMNCPTCV 336

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       M    +          H  +  R                +    
Sbjct: 337 QVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVI 396

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG     + +     +  GD                       +++  
Sbjct: 397 LMVQQCFEVYKDFGFNDFAVKIALRPENRIGD-----------------------DETWD 433

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL                  +   I R  +  T  +       
Sbjct: 434 KSEQILKNALDANNVSYEL---FPGEGAFYGPKIEFHLKDAIGRSWQCGTIQL------- 483

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D    +     +           + + ++    +     
Sbjct: 484 --------DFSMPQRLGATYIDKNGEKQVSVMLHRAIVGSLERFIGMLIEHYAGNLPLW- 534

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M   ++     +    ML   GIRA++ L  ++  G +++       P  +
Sbjct: 535 -LAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDL-RNEKIGFKIREHTLLRVPYLV 592

Query: 434 IQGTGERSRGMLQIKDLAKGK---ELSRE 459
           I G  E+ + ++ I+    G+   ++S +
Sbjct: 593 ILGKNEQEQKIITIRK-HSGEDLGQMSVD 620


>gi|312886253|ref|ZP_07745867.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter
           paludis DSM 18603]
 gi|311301278|gb|EFQ78333.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter
           paludis DSM 18603]
          Length = 641

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 44/134 (32%), Gaps = 3/134 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++    +              +          +  +
Sbjct: 509 NQKHRPVMIHRAPFGSMERFIAVLIEHCAGNFPLWLSPEQ--FIVLPISEKYEEYAKKLS 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            +L+ + I   +     +  G +++ A+ +  P  +I G  E + GM+ ++   +G   S
Sbjct: 567 DLLKDSDICGLIDF-RDEKIGRKIRDAEVKKIPYMLIVGEKEEAEGMVSVRKHGEGDLGS 625

Query: 458 REIKNNESWREARV 471
             I+      +  +
Sbjct: 626 MSIEEFTQKIKKEI 639



 Score = 37.5 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 11/82 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS------LGKFLPDEDRPN 67
           G      K   +R R+++ ++      G++ + TP + + +         K+  D  +P 
Sbjct: 262 GLPLWLPKGTALRERLVNFLQKAQVKAGYEQVITPHIGHKNLYVTSGHYEKYGADSFQPI 321

Query: 68  KGVFSLQDDDGQWISLRYDLTA 89
           K        +G+   L+     
Sbjct: 322 K-----TPQEGEEFFLKPMNCP 338


>gi|291404015|ref|XP_002718268.1| PREDICTED: threonyl-tRNA synthetase-like 2-like [Oryctolagus
           cuniculus]
          Length = 709

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 40/148 (27%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V     ++G    +VA+ S          + P  +  +         
Sbjct: 560 TYVSKDGDDKKRPVIIHRATLGSVERMVAILSENCGGKWPLWLSPRQVMVIPVGPTCEKY 619

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                      G  A++ L  S     +++ A        ++ G  E +   + ++    
Sbjct: 620 ALQVYNEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEMANNAVNVRTRDN 679

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  + +     +      T+   E
Sbjct: 680 KIHGEISVISAIEKLKNLKKCRTLNAEE 707



 Score = 41.4 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + + ++D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 331 FLPRGAFVYSTLMDLIREEYHKRDFLEVLSPNV-YNSKLWETSGHWQHYSENMFTFRVEK 389

Query: 78  GQWISLRYDLTAPLARYVAEN 98
            +  +L+           A  
Sbjct: 390 -ETFALKPMNCPGHCLMFAHR 409


>gi|288801328|ref|ZP_06406782.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331711|gb|EFC70195.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 654

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/415 (11%), Positives = 113/415 (27%), Gaps = 33/415 (7%)

Query: 63  EDRPNKGVFSLQDDDGQWISLRY-DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            DR  KG+       G  + LR  D+     R + + F      C       ++      
Sbjct: 258 SDRVGKGMPIWL-PKGTELRLRLQDM----LRKIQKRFGYQEVMCPVLGGKNLYV----T 308

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            G +  + +     + +  E  +  +  M       V   +   +  +  R    G + +
Sbjct: 309 SGHYAHYSKDAFRPITTPEEGEEYMLKPMNCPHHCEVFAWKPRSYKDLPLRISEFGNVYR 368

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
               G+     R+      D       + VK                      + +  + 
Sbjct: 369 YEKSGELHGLTRVRAFTQDDAHIFCRPEQVKNEFLRVMD------------IIQAVLKIF 416

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F + + + S+ +             G +E    +E           +   S +     Y
Sbjct: 417 DFKNFEAQISLRDP-----NNKEKYIGSDEAWHEAEQAIIDACKEKGLTAKSELGEAAFY 471

Query: 302 YTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
                +   +AI     +   Q              D    +     +    F       
Sbjct: 472 GPKLDFMIKDAIGRRWQLGTIQVDYNLPQRFKLEYTDEDNQKKTPVMIHRAPFGSLERFT 531

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            V ++              V I  +          +   +     G+RA +    ++  G
Sbjct: 532 AVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYAREVARFFDNNGVRATID-DRNEKIG 588

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +++  + +  P  +I G  E + G++ ++    G++ +   +         VA+
Sbjct: 589 RKIRDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMTQQEFVDRVNGEVAE 643



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 3/79 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ D +R I + +G+  +  P+L   +            +K  F 
Sbjct: 263 KGMPIWLPKGTELRLRLQDMLRKIQKRFGYQEVMCPVLGGKNLYVTS-GHYAHYSKDAFR 321

Query: 73  LQD--DDGQWISLRYDLTA 89
                ++G+   L+     
Sbjct: 322 PITTPEEGEEYMLKPMNCP 340


>gi|270308068|ref|YP_003330126.1| threonyl-tRNA synthetase (thrS) [Dehalococcoides sp. VS]
 gi|270153960|gb|ACZ61798.1| threonyl-tRNA synthetase (thrS) [Dehalococcoides sp. VS]
          Length = 582

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +       IR+ I +  +  +   G++ + TP +   D L K         + ++S 
Sbjct: 205 GLVNWLPNGATIRHLIEEFWKKEHLKRGYNLVYTPHIAKVD-LWKTSGHWGFYRENMYSP 263

Query: 74  QDDDGQWISLRY 85
            D DG+   L+ 
Sbjct: 264 MDIDGEEYVLKP 275


>gi|294941856|ref|XP_002783274.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239895689|gb|EER15070.1| threonyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 837

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/430 (9%), Positives = 103/430 (23%), Gaps = 38/430 (8%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
             I N+++D IR  Y   GFD + TP + +S++L +           ++S+  +   W  
Sbjct: 377 AVIYNKLVDFIRREYRLRGFDEVITPNI-FSEALFQQSGHCGNYKDNMYSMNIEGETWF- 434

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           L+            +   +            V    +                  +    
Sbjct: 435 LKPMNCPGHCMIFDQKVRSYKELPIRMADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFC 494

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
              ++   +   LE +    N +    +             +    +  + +      D 
Sbjct: 495 RPDQVQDEIVHALEFLKFVYNTFGFDFS-------------VCLSTRPKKAIGSRAIWDT 541

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
            +      ++    +   +       G  +     D +  +        +     +    
Sbjct: 542 AESGLKNALEACGIDYDLNPGDGAFYGPKIDIRLRDALNRYHQ-CGTIQLDFNLPIRFNL 600

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                   E          +    N            +        A +       K   
Sbjct: 601 QYRIAETEESGDAHAASEAANSPVN-----------DQQKGSTQSSAAVENVGSKAKADE 649

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
           +  G +  G          +   +             +  +              V++  
Sbjct: 650 ITLGELRHG--------FERPVMIHRAILGSIERCTAILTEHFGGKWPFWLSPRQVMVVP 701

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +       + Y    + L   G  A+  L S++    +++ A         + G  E++ 
Sbjct: 702 VSDKYSDYADYVR--KQLVRLGYEADADL-STRTMNKKVREAQVAAFNYIAVVGEKEQND 758

Query: 443 GMLQIKDLAK 452
             + ++    
Sbjct: 759 LTVTLRKRDT 768


>gi|218513336|ref|ZP_03510176.1| prolyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 215

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 1/95 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++     V+I     D       ++    L  AG          +  G +   AD 
Sbjct: 114 IWPASVAPFDVVVINMKAGDQACDDTCELIYAALTKAGKDVLYDDTDDRA-GTKFATADL 172

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P+ II G    + G +++KD   G   +  I+
Sbjct: 173 IGVPVQIIAGPRAVANGEVEVKDRKTGARETMTIE 207


>gi|227495136|ref|ZP_03925452.1| glycine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831588|gb|EEH63971.1| glycine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 474

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +    +  +  +     LR      E     +   G + +  D    P  I    
Sbjct: 381 VAVLPLSKKEELATPAKELAAELRKR-WNVE--YDEAGAVGRRYRRQDEIGTPFCITYDF 437

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                G + I+D    +++  ++    S+   R
Sbjct: 438 DSLEDGAVTIRDRDTMEQVRVKLDEVVSYLNER 470


>gi|153853789|ref|ZP_01995145.1| hypothetical protein DORLON_01136 [Dorea longicatena DSM 13814]
 gi|149753539|gb|EDM63470.1| hypothetical protein DORLON_01136 [Dorea longicatena DSM 13814]
          Length = 466

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/242 (7%), Positives = 64/242 (26%), Gaps = 12/242 (4%)

Query: 240 MVSFLSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +  F   D + +      +     ++      + V   +  ++     ++       +  
Sbjct: 227 LEFFCKPDTDLEWFDYWKKFCLNWLSSLGLKEDEVRYRDHDKEELSFYSKATTDVEFLFP 286

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           + +   ++      +       +  +      ++ A    +     
Sbjct: 287 FGWGELWGIADRTDYDLTQHQKVSGQDLTYFDDETKEKYIPYVIEPSLGADRMVLAFLCS 346

Query: 359 IVALKSLESST--------NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
               + + +          +    + PV I  +          +     L +     E  
Sbjct: 347 AYDEEEIGTEEKPDTRTVLHFHPALAPVKIGVLPLSKKLNEGAEKVFAQL-SKKYNCE-- 403

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                N G + +  D    P  +         G + ++D    ++   +I++ +++ E +
Sbjct: 404 YDDRGNIGKRYRRQDEIGTPFCVTYDFDSEEDGAVTVRDRDTMEQERIKIEDLDAYFEKK 463

Query: 471 VA 472
             
Sbjct: 464 FE 465


>gi|161829880|ref|YP_001596051.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189083495|sp|A9N9Z2|SYP_COXBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|161761747|gb|ABX77389.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 564

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ D +R      G   +  P+++ + SL +     +  
Sbjct: 31  MLRKLASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPA-SLWQESGRWEAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  + D             ++   +AR   +++  +       +  
Sbjct: 90  GAELLRIMDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTK 138



 Score = 36.7 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 5/109 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSK-NFGN 419
                          + +  ++           +     L  AG   E+     K   G 
Sbjct: 458 DERGIIWPMPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGY--EVLWDDRKERPGV 515

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                D    P  ++       RG+++ K     +  +  ++N  S   
Sbjct: 516 MFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 564


>gi|71895375|ref|NP_001026618.1| threonyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|53128235|emb|CAG31282.1| hypothetical protein RCJMB04_4k14 [Gallus gallus]
          Length = 711

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 32/92 (34%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   Q    AG+ A++ +     
Sbjct: 586 ERMIAILTENYGGKWPLWLSPQQVMVVPVGPTCDEYAQKVRQQFHDAGLMADIDVDPGCT 645

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +++ A        ++ G  E++ G + I+
Sbjct: 646 LNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 677



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 333 FLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNI-FNSKLWMTSGHWQHYSENMFSFEVEK 391

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 392 -EIFALKPMNCPG 403


>gi|300864298|ref|ZP_07109176.1| Prolyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300337687|emb|CBN54322.1| Prolyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 601

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 45/157 (28%), Gaps = 11/157 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R   +  G      P L+ ++ L +     D   K    
Sbjct: 37  SGVYVYLPLLWRVLKKVSQIVREEMDATGAQECLLPQLQPAE-LWRESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +F+L D   + + L     ++   +A    R   +    +      +R     R      
Sbjct: 96  MFALTDRQNRELGLGPTHEEVITTIAKDMIRSYRQLPLHLYQIQTKFRDEIRPRFGLMRG 155

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F             S +    +M    ++ L   G
Sbjct: 156 REFIMKDGYSFHKDEESLKKTYQDMAQAYSNMLRRCG 192



 Score = 43.7 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++      D+  +   +     L  AG+   +     +  G + K AD 
Sbjct: 494 IWPVAIAPYQVIISIPNISDAQQIEVAEKLYTELNQAGVETLLDDRDERA-GVKFKDADL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P  I+ G     +G +++ + A  K     I + +S
Sbjct: 553 IGIPYRIVTGRS-LKQGKVEVVERAAHKSHEIAIDDVKS 590


>gi|15081626|gb|AAK82468.1| AT5g26830/F2P16_90 [Arabidopsis thaliana]
 gi|29028762|gb|AAO64760.1| At5g26830/F2P16_90 [Arabidopsis thaliana]
          Length = 676

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/128 (9%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+  +            ++  +     S    +   + ++ AG  
Sbjct: 551 HRAVLGSVERMFAILLEHYKGKWPFWISPRQAIVCPIS--EKSQQYAEKVQKQIKDAGFY 608

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            +  L + +    +++ A        ++ G  E + G + ++         + I++    
Sbjct: 609 VDADL-TDRKIDKKVREAQLAQYNYILVVGETEAATGQVSVRVRDNAAHSVKSIEDLLEE 667

Query: 467 REARVAQI 474
            +A+ A+ 
Sbjct: 668 FKAKTAEF 675



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              +L  G         R+ NR++D I+N Y + G+  + TP +   + L +     D  
Sbjct: 295 FSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTEVITPNMYNME-LWQTSGHADNY 353

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
              +F+   +  Q   L+      
Sbjct: 354 KDNMFTFNIEK-QEFGLKPMNCPG 376


>gi|304415438|ref|ZP_07396087.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304282702|gb|EFL91216.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 652

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 85/323 (26%), Gaps = 8/323 (2%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +      A        A+ +     +  +Y I   N      I  +      D       
Sbjct: 298 MMDRLLWAKTGHWENYAENMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 357

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F     + +E  + +     +       ++
Sbjct: 358 FGSCHRNESSGALHGL-MRVRAFTQDDAHIFCTEQQVRAEVNNCIAMIYDMYRVFGFEKI 416

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   +E    +    N I        G  Y     +        
Sbjct: 417 EVKLSTRPEKRIGSDEIWTAAENDLAAALTENGIAFDWQPGEGAFYGPKIEFTLHDCLDR 476

Query: 316 MNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
             +              G    D    R     +           + + ++         
Sbjct: 477 AWQCGTVQLDFSLPGRLGASYIDENSQRTVPVMIHRAILGSIERFIGILIEEYAGCFPTW 536

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    ++     +   +  +  L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 537 --LAPVQAVVINITDKHVDYAKKISTALQHAGIRVKTDL-RNEKVGLKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRG-MLQIKDLAKGK 454
           ++ G  E   G  + ++ L    
Sbjct: 594 LVCGDKEVESGNKVSVRTLGTRT 616



 Score = 41.4 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ PL+     L       +  
Sbjct: 256 MQEEAP-GMVFWHHNGWTIFRELESFVRAKLQEYQYQEVKGPLMMDR-LLWAKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 AENMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNESSGALH 371


>gi|326776245|ref|ZP_08235510.1| prolyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326656578|gb|EGE41424.1| prolyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 567

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
           + D L  + K   V    + IG+SR + AL      +      +E+ P  +  +      
Sbjct: 425 QLDVLGQQGKPVRVTMGSYGIGVSRAVAALTEQTADDKGLCWPREIAPADVHVVAAGKAL 484

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++     ++ L  AG+R  +      + G +   ++    P  ++ G    + G+L++K
Sbjct: 485 QTELALDVSEKLNAAGLRVLVDDRPGVSPGVKFTDSELIGVPKILVAGRRS-ADGVLELK 543

Query: 449 DLAKGKELSREIKN 462
           D   G+     +  
Sbjct: 544 DRRTGEREELTVDE 557



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 21/68 (30%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ + I + +R   +  G   +  P L   +         +     +F L+D  
Sbjct: 46  WLPLGKKVLDNISNVVREEMDAIGAQEVLLPALLPKEPYEAS-GRWEEYGDLLFRLKDRK 104

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 105 GGDYLLGP 112


>gi|182435611|ref|YP_001823330.1| prolyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|226701340|sp|B1VYP2|SYP_STRGG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|178464127|dbj|BAG18647.1| putative prolyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 567

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
           + D L  + K   V    + IG+SR + AL      +      +E+ P  +  +      
Sbjct: 425 QLDVLGQQGKPVRVTMGSYGIGVSRAVAALTEQTADDKGLCWPREIAPADVHVVAAGKAL 484

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++     ++ L  AG+R  +      + G +   ++    P  ++ G    + G+L++K
Sbjct: 485 QTELALDVSEKLNAAGLRVLVDDRPGVSPGVKFTDSELIGVPKILVAGRRS-ADGVLELK 543

Query: 449 DLAKGKELSREIKN 462
           D   G+     +  
Sbjct: 544 DRRTGEREELTVDE 557



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 21/68 (30%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ + I + +R   +  G   +  P L   +         +     +F L+D  
Sbjct: 46  WLPLGKKVLDNISNVVREEMDAIGAQEVLLPALLPKEPYEAS-GRWEEYGDLLFRLKDRK 104

Query: 78  GQWISLRY 85
           G    L  
Sbjct: 105 GGDYLLGP 112


>gi|169824587|ref|YP_001692198.1| glycyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831392|dbj|BAG08308.1| glycyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 465

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/226 (5%), Positives = 48/226 (21%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +         K  +       E + + +  ++     ++       +    +        
Sbjct: 240 EWFDYWRNFCKEFLLNLGIREENLRLRDHSQEELSFYSKATTDFEYLFPFGWGELWGIAD 299

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +    +              +  +      +V      +         + LE +T
Sbjct: 300 RTDYDLSKHSEGSGEKLEYMDPTTNEKYIPYCIEPSVGVDRMFLSFLCDAYDEEQLEDNT 359

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     +    +  +        K       L             + + G + +  
Sbjct: 360 TRTVLKIHPALAAYKVAVLPLTKKLNDKAMEIYNEL-AKNF--MTHFDDAGSIGKRYRRE 416

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  +           + I+D    ++    ++    +    
Sbjct: 417 DEAGTPYCVTIDFDTLEDNTVTIRDRDSMEQKRMTVEEIIEFVNKE 462


>gi|29653442|ref|NP_819134.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|81839111|sp|Q83F67|SYP_COXBU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|29540704|gb|AAO89648.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 566

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ D +R      G   +  P+++ + SL +     +  
Sbjct: 33  MLRKLASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPA-SLWQESGRWEAY 91

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  + D             ++   +AR   +++  +       +  
Sbjct: 92  GAELLRIMDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTK 140



 Score = 36.7 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 5/109 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSK-NFGN 419
                          + +  ++           +     L  AG   E+     K   G 
Sbjct: 460 DERGIIWPMPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGY--EVLWDDRKERPGV 517

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                D    P  ++       RG+++ K     +  +  ++N  S   
Sbjct: 518 MFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 566


>gi|88810462|ref|ZP_01125719.1| prolyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88792092|gb|EAR23202.1| prolyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 569

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L A L  G        +R+   +   +R   +  G   +  P ++ ++ L +     ++ 
Sbjct: 31  LIARLGAGLYTWLPLGLRVLRNVERVVREEMDRIGSLEVLMPAVQPAE-LWQESGRWEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  L+D   +         ++   L R    ++  +       +  
Sbjct: 90  GPELLRLKDRHAREFCFGPTHEEVITDLVRREIHSYRQLPVTYYQIQTK 138


>gi|126306083|ref|XP_001381501.1| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative) [Monodelphis domestica]
          Length = 475

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/152 (12%), Positives = 42/152 (27%), Gaps = 13/152 (8%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   ++ P L  ++ L +     +   K +F LQD  
Sbjct: 90  YLPYTVRAMEKLVKVIDQEMQAIGGQKLDMPTLSSAE-LWRVTDRWNLMGKELFRLQDRH 148

Query: 78  GQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FRQ 127
            +   L     ++   L    ++   +                ++  P         F  
Sbjct: 149 NKDYCLGPTHEEVITSL--MASQKTLSYKQLPYLLYQITRKFRDEPRPRFGLLRGREFYM 206

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                 D    +A      +C         +G
Sbjct: 207 KDMYTFDCSSEAAHQTYDLVCEAYGRVFNRLG 238


>gi|37522094|ref|NP_925471.1| prolyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81834313|sp|Q7NHL0|SYP_GLOVI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|35213093|dbj|BAC90466.1| prolyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 589

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 20/125 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     VL+             +   + L  AGI   +     +  G + K AD 
Sbjct: 477 LWPIAIAPYQVVLVPANVAVEAQRQAAEELYRSLTAAGIDTLLDDRPERA-GVKFKDADL 535

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              PL +  G      G+++IK                       A   +P++E ++ +K
Sbjct: 536 IGIPLRVTLGRD-LEAGLVEIK------------------VRGGGAAEKVPLAEALAQIK 576

Query: 487 KILQE 491
            +++ 
Sbjct: 577 GLIER 581


>gi|313668802|ref|YP_004049086.1| threonyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006264|emb|CBN87726.1| putative threonyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 637

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAARLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIA-DALVNH 637



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 261 GMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|212696507|ref|ZP_03304635.1| hypothetical protein ANHYDRO_01045 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676492|gb|EEB36099.1| hypothetical protein ANHYDRO_01045 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 390

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +R+ +L+   ++    G+  I+TPL+   +   +     D   + ++  
Sbjct: 12  GFPFFKENGMILRHELLNWWTDVLAENGYGEIQTPLIMNEELWHRS-GHWDHYKENMY-F 69

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              DG+  +++            E   +    P R    G V R+E  G   
Sbjct: 70  TKIDGENYAVKPMNCPGSVLVYGEEPHSYRDLPIRLAEYGQVHRHELSGALH 121



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +              + ++ AG R ++   S    G +++ A        ++ G  
Sbjct: 290 QVAIIPVSDKFADFADDLAEKIKKAGYRVDVDHRSEG-VGYKIRQAQLMRTNYMLVVGEN 348

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           E   G L +++    +      +         
Sbjct: 349 EEKSGKLTVRNRDGEETKDVSFEEFIEKLNQE 380


>gi|126642843|ref|YP_001085827.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 546

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 44/160 (27%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + SL +     ++ 
Sbjct: 6   MIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPA-SLWEESGRYEQY 64

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D       L     ++   LAR   +++  +          +R     R   
Sbjct: 65  GPELLRFKDRHDNPFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRFGV 124

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 125 MRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLG 164


>gi|325571083|ref|ZP_08146655.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156168|gb|EGC68354.1| proline--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 569

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 60/536 (11%), Positives = 125/536 (23%), Gaps = 78/536 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   IR          +  P L   +   K         + ++ L
Sbjct: 38  GIYVYLPLAQRVLEKIKRVIREELAEIDAVEMAMPSLLPYEP-WKESGRASLYGESLYRL 96

Query: 74  QDDDGQWISLRY------------DLTA----PLARYVAENFDTIVFPCRTYRIGPVFRN 117
            D + + I L              ++T+    PL+ Y  +         R   +      
Sbjct: 97  TDRNEREIVLGPTHEEPFTTLIKNEITSYKRLPLSLYQIQTKYRDEQRPRFG-LIRSREF 155

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
                  F                   A +     +    VG               L G
Sbjct: 156 IMQDGYSFHADEASLDQTYNRYEMAYHAILKRCGIEYRAVVGDNGLMGGRDSKEFLALSG 215

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQG--------------VKLLLGEGRTDNS 223
           I E++  +  +        L     + K   +               ++ L     TD  
Sbjct: 216 IGEELICYSTESDYVANWKLATSQYIAKKSHETYLELQKVVHKESLSLEELAKTHDTDLQ 275

Query: 224 GDFTKGANLTSEQI-------------DIMVSFLSIDLEKSM-HELYELVKGTIAGEKGF 269
                      EQ+               +  FL+ D  K +  E  E    +    +  
Sbjct: 276 KIVQVFLLFVDEQVIMVLLRGDHSLNETKIKHFLAADQVKVLTAEEAESYLTSDTQLRSP 335

Query: 270 NELV-----------VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
            EL                 +           +++ + R  +      +  +       +
Sbjct: 336 IELADSIQLYADQHVQDMANLIVPAAEKQSYFLNANVGRDFQPLAFADFRLVQEGDPSPD 395

Query: 319 KQKPVVFGSVGGGGRYDGLVSRF----------KGQNVPATGFSIGISRLIVAL------ 362
            +  + F      G    L +++          +  +            +   L      
Sbjct: 396 GKGTLTFTRGIEVGHIFKLGTKYSEAQEATVVDENGDEQPIIMGCYGLGVSRLLSTIVEQ 455

Query: 363 --KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGN 419
                            V I     +    +      + +    G +  +   + +  G 
Sbjct: 456 YGNEFGIDWPQEIAPFDVHIIQTSIEDSYQNALSEEVEEMMNQVGYQVLVDDRNERA-GV 514

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   AD   CP+ +  G      G+++IK    G  +    +   S     +A   
Sbjct: 515 KFADADLIGCPIRLTIGKKAVE-GIVEIKIKHTGATVEVRKEEVASTLTILLANQE 569


>gi|237841953|ref|XP_002370274.1| histidyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211967938|gb|EEB03134.1| histidyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221482746|gb|EEE21084.1| conserved hypothetical protein [Toxoplasma gondii GT1]
 gi|221503061|gb|EEE28767.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 1321

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
             RG  D P    R+   +    R    ++GF    TP++E ++       +
Sbjct: 111 PVRGSQDFPPLLWRLHQWLFSQWRETAASFGFYEFATPVVEPAELYVHPSGE 162



 Score = 43.3 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 9/78 (11%), Positives = 20/78 (25%)

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D   + ++LR +LT  L R +   +             P   +            
Sbjct: 254 LYLFRDQSERPLALRPELTPSLCRLLLRLYAKPQRRVSGVSPPPFRESASTKRTDESGGK 313

Query: 130 QCDVDNVGSSAETADAEM 147
               D   +         
Sbjct: 314 PTSSDWDSNRENHDAEGC 331


>gi|95007092|emb|CAJ20311.1| hypothetical protein TgIa.0570c [Toxoplasma gondii RH]
          Length = 1480

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
             RG  D P    R+   +    R    ++GF    TP++E ++       +
Sbjct: 270 PVRGSQDFPPLLWRLHQWLFSQWRETAASFGFYEFATPVVEPAELYVHPSGE 321



 Score = 43.3 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 9/78 (11%), Positives = 20/78 (25%)

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++  +D   + ++LR +LT  L R +   +             P   +            
Sbjct: 413 LYLFRDQSERPLALRPELTPSLCRLLLRLYAKPQRRVSGVSPPPFRESASTKRTDESGGK 472

Query: 130 QCDVDNVGSSAETADAEM 147
               D   +         
Sbjct: 473 PTSSDWDSNRENHDAEGC 490


>gi|292654231|ref|YP_003534128.1| glycyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291372518|gb|ADE04745.1| glycyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 594

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 6/100 (6%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS---RG 443
              +       + LR AG         S + G + +  D    P  I             
Sbjct: 491 DGLVDLADDVAEELRAAGFAV--VYDDSGSIGRRYRRQDEVGTPFCITIDRDGLEGDGAD 548

Query: 444 MLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + I++   GK++   + +         A  T    +++ 
Sbjct: 549 TVTIRERDSGKQVRLPVDDLVGTLVGLRAG-TASFDDVLD 587


>gi|255008477|ref|ZP_05280603.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313146205|ref|ZP_07808398.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12]
 gi|313134972|gb|EFR52332.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12]
          Length = 646

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/465 (10%), Positives = 114/465 (24%), Gaps = 90/465 (19%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ D +R I   Y +  +                           
Sbjct: 261 KGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEV--------------------------- 293

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                         +T P+                    G   +  K          + +
Sbjct: 294 --------------ITPPI-----------GNKLLYVTSGHYAKYGKDAFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDY--HIGINNRKILDGILEKIGLHGDDKL 190
              +         E+      + + + ++  ++           L G+        DD  
Sbjct: 329 EYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAH 388

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                     + L    +  +     +     +                +     ++ EK
Sbjct: 389 IFCRPDQVKGEFLRVMDIISIVFRSMDFTNFEAQ---------------ISLRDKVNREK 433

Query: 251 SMHELYELVKGTIAGEKGFNE--LVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVY 307
            +       K   A  +   E  L    E    + Y       +   I R  +  T    
Sbjct: 434 YIGSDENWEKAEQAIIEACEEKGLKAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---I 490

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +     P   E +              D    R    +    G    + R +  L    +
Sbjct: 491 QVDYNLPERFELEYMGS----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTA 537

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +  + P  +  +          +     L+T  IRA +    ++  G +++  + +
Sbjct: 538 GKFPLW-LTPEQVVILPISEKFNEYAEKVKTYLKTKEIRAIVD-DRNEKIGRKIRDNEMK 595

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             P  +I G  E   G + ++   +G + + + ++        V 
Sbjct: 596 RIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEDFGEILNEEVQ 640


>gi|224438525|ref|ZP_03659445.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144952|ref|ZP_07807145.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129983|gb|EFR47600.1| threonyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 603

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 41/98 (41%), Gaps = 1/98 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +      L   +     +   G  AE+ +  +++   +++ A+++  PL ++ G
Sbjct: 505 PTQVILIPIGDAQLGYARELRNEIIKIGGYAEI-MDKNESLNKKIRLAEKQKVPLIVVIG 563

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             E  R +L I+D  +  +         +  + ++ +I
Sbjct: 564 AKEVERKILAIRDRREKAQYGLSQAEFITTLKTKIGEI 601



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 65/254 (25%), Gaps = 17/254 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R  +   +       G++P+  P +  SD   K     D   + ++  
Sbjct: 229 GLPIWLPKGARLRQNLERLLTIALNERGYEPVRGPEILKSDV-WKKSGHYDNYKENMY-F 286

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH-GPGRFRQFIQCD 132
              D Q   ++                  V   + Y+  P    E       +    + +
Sbjct: 287 TTIDEQEYGIKP--------------MNCVGHIKVYQSSPRSYRELPLRFYEYGIVHRHE 332

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              V                   +   IK    HI    + ILD       +    + ++
Sbjct: 333 KSGVLHGLLRVREFTQDDAHIFCQTNQIKDEVNHIISFTKSILDAFNFAYEMELSTRPDK 392

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            +      +         ++      + D  G    G  +  +  D +         +  
Sbjct: 393 SIGNDGVWESATNALKNALEENKIAYQIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVD 452

Query: 253 HELYELVKGTIAGE 266
             L E    +   E
Sbjct: 453 MNLPERFALSYTDE 466


>gi|222086050|ref|YP_002544582.1| threonyl-tRNA synthetase [Agrobacterium radiobacter K84]
 gi|254783503|sp|B9JFG4|SYT_AGRRK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221723498|gb|ACM26654.1| threonyl-tRNA synthetase [Agrobacterium radiobacter K84]
          Length = 662

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 44/134 (32%), Gaps = 3/134 (2%)

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
            G    D    + +   +           L + +++             V++ T+  ++D
Sbjct: 506 FGAFYIDQHSEKTQPVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATITSEAD 565

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +     + LR AG+  E     ++    +++       P+ I+ G  E     + I+
Sbjct: 566 GYGE--EVAEALRDAGLTVETDF-RNEKINYKIREHSVTKVPVIIVCGKKEAEERSVNIR 622

Query: 449 DLAKGKELSREIKN 462
            L    + +  +  
Sbjct: 623 RLGSQAQTAMSLDE 636


>gi|184159387|ref|YP_001847726.1| prolyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|239501767|ref|ZP_04661077.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|332876227|ref|ZP_08444002.1| proline--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|226695842|sp|B2HY33|SYP_ACIBC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731481|sp|A3M8I1|SYP_ACIBT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|183210981|gb|ACC58379.1| Prolyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|193078264|gb|ABO13225.2| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|322509299|gb|ADX04753.1| proS [Acinetobacter baumannii 1656-2]
 gi|323519326|gb|ADX93707.1| prolyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735499|gb|EGJ66551.1| proline--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 571

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 44/160 (27%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + SL +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPA-SLWEESGRYEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D       L     ++   LAR   +++  +          +R     R   
Sbjct: 90  GPELLRFKDRHDNPFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLG 189


>gi|150024985|ref|YP_001295811.1| threonine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
 gi|166223340|sp|A6GY22|SYT_FLAPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|149771526|emb|CAL42995.1| Threonine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 648

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 70/237 (29%), Gaps = 14/237 (5%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     L  E   ++   L +            +  ++  ++  ++ +   E   
Sbjct: 383 DDAHIFCTPDQLDEEFKKVIDLVLYVFGSLGFENFTAQI--SLRDKENRDKYIGSDENWE 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV-- 338
           K+            +   +EY     Y   L F V +   +    G++            
Sbjct: 441 KAENAIINAARDKNLNTVVEYGEAAFYGPKLDFMVKDALGRSWQLGTIQVDYNLPERFEL 500

Query: 339 -------SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
                     +   +    F      + + L+    +          +I  +        
Sbjct: 501 TYKGSDDQLHRPVMIHRAPFGSMERFIAILLEHTAGNFPLWLMPEQAIILCLS--DKYEI 558

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             +    +L    IRA +    +++ G +++ A+ +  P  +I G  E     + I+
Sbjct: 559 YAKKVLNLLENHEIRALID-NRNESIGRKIRDAEMQKTPFMLIVGEEEEKNNTISIR 614



 Score = 38.3 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/239 (11%), Positives = 62/239 (25%), Gaps = 19/239 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS------LGKFLPDEDRPN 67
           G      K   +R+R+   ++   +  G++ + TP +   +         K+  D  +P 
Sbjct: 260 GLPLWLPKGAALRDRLEQFLKKAQKKGGYEQVVTPHIGQKELYVTSGHYAKYGADSFQPI 319

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
                    +G+   L+             +   I             R  + G     +
Sbjct: 320 S-----TPTEGEEFLLKPMNCP--------HHCEIYNVRPWSYKDLPKRYAEFGTVYRYE 366

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
                         T D        D L+    K  D  + +      +    +I L   
Sbjct: 367 QSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFKKVIDLVLYVFGSLGFENFTAQISLRDK 426

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           +  ++ +      +K +   +   +        +       G  L     D +     +
Sbjct: 427 ENRDKYIGSDENWEKAENAIINAARDKNLNTVVEYGEAAFYGPKLDFMVKDALGRSWQL 485


>gi|320104617|ref|YP_004180208.1| prolyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751899|gb|ADV63659.1| prolyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 595

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 3/118 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS-KNFGNQLKYADR 426
               I     +LI     + D ++  +   + L  AGI            F    K AD 
Sbjct: 469 WPLAIAPYEVILIPLKVSNPDLMAVVETLERELAAAGIDVLTDDRDHQPGFK--FKDADL 526

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
              PL ++ G      G L++K   + +  S  ++   +   AR+AQ     + ++S 
Sbjct: 527 IGIPLRVVIGERGLKEGKLELKWRHEKEADSIPVEGAGAAIAARIAQAKHARARVLSE 584



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 8/165 (4%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K  +  +L  G         R+ N+I+  +R   ++ G   +  P L+  + L K     
Sbjct: 28  KAGMIRQLGSGAYTYLPLGWRVLNKIVAIVRKGMDDAGAQEMLMPALQPVE-LWKETGRY 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR----IGPVFR 116
                 +  L+    Q ++L     ++   LAR + +++  +       +      P  R
Sbjct: 87  QTFGDLLMQLKVGGDQTMALGPTHEEVVTDLARDLIKSYRQLPMTLYQIQTKFRDEPRPR 146

Query: 117 NEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                   F        D        +   M        +  GI 
Sbjct: 147 FGVLRTREFLMKDAYSFDANLDQLNQSYDAMYEAYQRIFDECGIP 191


>gi|254520543|ref|ZP_05132599.1| glycyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914292|gb|EEH99493.1| glycyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 463

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/224 (7%), Positives = 55/224 (24%), Gaps = 8/224 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     +       + + + +   +     +        +    +        
Sbjct: 238 EWFKYWKDYCWNFLLNLGVQQDNLRMRDHGEEELSFYSNATSDIEYLFPFGWGELWGIAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES-- 367
              + +   ++      S       +  V      ++ A   ++         + LE   
Sbjct: 298 RTDYDLKKHQEHSGQDMSYLDPSTNEKYVPYVIEPSLGADRVALAFLVDAYDEEELEGGD 357

Query: 368 ---STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        K       L +     E     + + G + +  
Sbjct: 358 VRTVMHLHPALAPYKAAILPLSKKLSEKALDVYSDL-SKKFNIE--YDEAGSIGKRYRRQ 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           D    P  I           + I++    ++   +I + E++ E
Sbjct: 415 DEIGTPFCITIDFDTLEDEAVTIRNRDTMEQERIKISDLEAYIE 458


>gi|149030652|gb|EDL85689.1| threonyl-tRNA synthetase-like 1, isoform CRA_a [Rattus norvegicus]
          Length = 617

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/444 (11%), Positives = 115/444 (25%), Gaps = 81/444 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  RI N ++  IR  Y   GF  ++TP L +S  L +     +     +F      
Sbjct: 223 FLPRGTRIYNALVAFIRAEYARRGFSEVKTPTL-FSTKLWEQSGHWEHYRAHMF------ 275

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               SL+   T  +                                        D   + 
Sbjct: 276 ----SLKPPGTDGV---------------------------DSSQSGHPARCPKDTLALK 304

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G+L +    G      RL   
Sbjct: 305 PMNCPAHCLMFAHRPRSWRELPVRLADF-----------GVLHRAEASGSLGGLTRLWRF 353

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +  G  D           +          LS      + E + 
Sbjct: 354 QQDDAHIFCAPSQLEAEIR-GCLDFLRSVYSVLGFSFHLA------LSTRPPGFLGEPHL 406

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E      L             + +   + R  +  T    ++  L F
Sbjct: 407 WDQAEKVLQQALEEFGEPWNLNPGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 466

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +                       +      V      +G    ++ + +         
Sbjct: 467 DLQY------------------KGPAGAPECPVLIHRAVLGSVERLLGVLAESCGGRWPL 508

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +   ++     +   Q L+ AG+ +++          +++ A   +     
Sbjct: 509 WLSPFQVVVIPVRTEQEDYARQVQQCLQAAGLVSDLDADCGLTLSRRVRRAQLAHYNFQF 568

Query: 434 IQGTGERSRGMLQIK---DLAKGK 454
           + G  E+S+  + ++   +   G+
Sbjct: 569 VVGQREQSQMSVNVRTRDNRQLGE 592


>gi|308805643|ref|XP_003080133.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116058593|emb|CAL54300.1| putative threonyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 625

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 2/92 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    +     +     LR AG R E+   + +     ++ A++   P+  
Sbjct: 523 WLAPVQVRLLPVTDEVSDYTEGVAAKLREAGCRVEI--CTGQRLAKLVRTAEKAKIPVMA 580

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           + G  E +   L ++    G   S  +    S
Sbjct: 581 VVGRDEAANNTLAVRTYKDGDVGSLSVDEVLS 612



 Score = 41.4 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++R+ I    ++++   G++ + +P +   + L +     D  ++ ++  
Sbjct: 248 GLVFWHPKGAQMRHMIETYWKDLHLARGYELLYSPHVARQE-LWQTSGHSDFYSENMYQP 306

Query: 74  QDDDGQWISLRYDLTA 89
              + +   L+     
Sbjct: 307 IKVEEEMYQLKPMNCP 322


>gi|73954351|ref|XP_536509.2| PREDICTED: similar to threonyl-tRNA synthetase [Canis familiaris]
          Length = 789

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 33/101 (32%), Gaps = 4/101 (3%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +          Q   Q    A    ++ L        +++ A        ++ G  
Sbjct: 686 QVMVVPVGPTCDEYAQKVRQQFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVIGEK 745

Query: 439 ERSRGMLQIKDLAK---GKELSRE-IKNNESWREARVAQIT 475
           E++ G + I+       G+    E I+  +  +++R  Q  
Sbjct: 746 EKASGTVNIRTRDNKVHGERTILETIERLQQLKQSRSKQAE 786



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + Y+  L          ++ +FS + + 
Sbjct: 402 FLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNI-YNSRLWMTSGHWQHYSENMFSFEVEK 460

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 461 -ELFALKPMNCPG 472


>gi|62078811|ref|NP_001014062.1| threonyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|81884372|sp|Q68FW7|SYTM_RAT RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; AltName:
           Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor
 gi|51259375|gb|AAH79154.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Rattus
           norvegicus]
          Length = 723

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/444 (11%), Positives = 115/444 (25%), Gaps = 81/444 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  RI N ++  IR  Y   GF  ++TP L +S  L +     +     +F      
Sbjct: 329 FLPRGTRIYNALVAFIRAEYARRGFSEVKTPTL-FSTKLWEQSGHWEHYRAHMF------ 381

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               SL+   T  +                                        D   + 
Sbjct: 382 ----SLKPPGTDGV---------------------------DSSQSGHPARCPKDTLALK 410

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G+L +    G      RL   
Sbjct: 411 PMNCPAHCLMFAHRPRSWRELPVRLADF-----------GVLHRAEASGSLGGLTRLWRF 459

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +  G  D           +          LS      + E + 
Sbjct: 460 QQDDAHIFCAPSQLEAEIR-GCLDFLRSVYSVLGFSFHLA------LSTRPPGFLGEPHL 512

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E      L             + +   + R  +  T    ++  L F
Sbjct: 513 WDQAEKVLQQALEEFGEPWNLNPGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 572

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
            +                       +      V      +G    ++ + +         
Sbjct: 573 DLQY------------------KGPAGAPECPVLIHRAVLGSVERLLGVLAESCGGRWPL 614

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +   ++     +   Q L+ AG+ +++          +++ A   +     
Sbjct: 615 WLSPFQVVVIPVRTEQEDYARQVQQCLQAAGLVSDLDADCGLTLSRRVRRAQLAHYNFQF 674

Query: 434 IQGTGERSRGMLQIK---DLAKGK 454
           + G  E+S+  + ++   +   G+
Sbjct: 675 VVGQREQSQMSVNVRTRDNRQLGE 698


>gi|330834490|ref|YP_004409218.1| Ser-tRNA(Thr) hydrolase [Metallosphaera cuprina Ar-4]
 gi|329566629|gb|AEB94734.1| Ser-tRNA(Thr) hydrolase [Metallosphaera cuprina Ar-4]
          Length = 386

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L+  GIR ++     +  G +++ A     P   I G  E     L +K     ++    
Sbjct: 294 LKERGIRVQVD-DLDEGIGKKIRRAGMDWIPYVAIVGERELQTKNLTVKVRDGSEQKPMT 352

Query: 460 IKNNESWREA 469
           ++  E     
Sbjct: 353 VEELEKVVRE 362


>gi|291165911|gb|EFE27958.1| threonine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 655

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 41/151 (27%), Gaps = 3/151 (1%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    + +   +  T        L   ++              V I  +          
Sbjct: 506 IDQNGEKKRPYIIHRTSLGCYERTLAWLIEKYAGKFPTWLCPEQVRILPIS--DKYAEYA 563

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   Q L   G+   +   S K  G +++ A     P  ++ G  E S   + ++    G
Sbjct: 564 EEVKQELARNGVDVTVDHRSEK-IGFKIRDARLNRLPYMLVVGEKEASDRTVSVRSRYAG 622

Query: 454 KELSREIKNNESWREARVAQITIPISELVST 484
            E    + +        +    I   E+   
Sbjct: 623 DEGIEAVDSFVDRICKEIRTKEIRKEEVTEE 653



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 11/118 (9%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           LP+G        ++++  I D + +    +G+   +TPL+  SD   +     D   +G+
Sbjct: 266 LPKGTK----MVMKLQRWIED-LED--REWGYVRTKTPLMAKSDLY-RISGHWDHYKEGM 317

Query: 71  FSLQDD--DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           F L D+  D +  +LR  +T P   YV +N                        G   
Sbjct: 318 FVLGDEEVDKEVFALRP-MTCPFQYYVYKNTQKSYRDLPYRMGETSTLFRNEDSGEMH 374


>gi|268681605|ref|ZP_06148467.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268621889|gb|EEZ54289.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 637

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|260441039|ref|ZP_05794855.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268600819|ref|ZP_06134986.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268584950|gb|EEZ49626.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 637

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|238895235|ref|YP_002919970.1| threonyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238547552|dbj|BAH63903.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 642

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 91/347 (26%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDETWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPQRLSASYVGENNERQVPVMIHRAILGSLERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWIAPVQVVVMNITDSQAEYVNELTRKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL         I+  +    +R  Q 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSMDVNEV-IEKLQQEIRSRSLQQ 639



 Score = 40.6 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 11/155 (7%), Positives = 37/155 (23%), Gaps = 3/155 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                      +     + ++   +   +  V   
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDM 407


>gi|260587370|ref|ZP_05853283.1| proline--tRNA ligase [Blautia hansenii DSM 20583]
 gi|331083671|ref|ZP_08332782.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260542237|gb|EEX22806.1| proline--tRNA ligase [Blautia hansenii DSM 20583]
 gi|330403882|gb|EGG83434.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 479

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 72/233 (30%), Gaps = 29/233 (12%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L + ++   +           +   +     +    EA++      +      FG     
Sbjct: 183 LNIYADFCEQVLAMPVVKGKKTDKEKFAGAESTYTIEALMHDGKALQSGTSHNFGDGFAK 242

Query: 332 G---RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD---H 385
               +Y    ++ +  +  + G +  +   I+ +    S       + PV    +     
Sbjct: 243 AFGIQYTDKENKLQYVHQTSWGMTTRLIGAIIMVHGDNSGLVLPPRIAPVQAVVIPIQQK 302

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR--RNCPLAIIQGTGERSRG 443
               L         L+ AGIR +    + K+ G   K+A++  R  P+ I  G  +    
Sbjct: 303 KEGVLDNAYKLQAQLKAAGIRVKTD-DTDKSPG--FKFAEQEMRGIPVRIECGPKDMEAN 359

Query: 444 MLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
              +                   R     +IT+ +  L   V+KIL   + E+
Sbjct: 360 QAVV------------------VRRDTREKITVSLDNLAEEVQKILDTMQVEM 394


>gi|225021160|ref|ZP_03710352.1| hypothetical protein CORMATOL_01172 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946067|gb|EEG27276.1| hypothetical protein CORMATOL_01172 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 584

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 13/88 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +R   +I   +R   ++ G   +  P L   E  +   ++    D     +
Sbjct: 40  GVYTWLPLGLRTLRKIEKVVREEMDHIGAQELLFPALLSREPYEQTRRWTEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY---DLTAPLARYV 95
           F L+D  G  + L     ++    AR V
Sbjct: 96  FRLKDRKGNDMLLGPTHEEM---FARQV 120



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 45/126 (35%), Gaps = 20/126 (15%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +         V +   + D  +L+        L  AG+          + G + K ++
Sbjct: 479 GLNWPVEVAPYQVHVVVANKDKAALAAGDDIVVQLDAAGVEVLFDDRPKVSPGVKFKDSE 538

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
               P  ++ G    S G+++++ +  G+                   + +P +++V TV
Sbjct: 539 LLGMPYIVVLGRS-FSNGIVELR-IRGGE------------------TLEVPATDIVDTV 578

Query: 486 KKILQE 491
            K++ +
Sbjct: 579 TKLIHK 584


>gi|221194423|ref|ZP_03567480.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185327|gb|EEE17717.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 588

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN-CPLA 432
            + P  +  +     S          L+ AGIR ++     +  G +++ A   +  P  
Sbjct: 487 WLAPCQVKVLPVSEKSREYAHEVAGALQAAGIRVKVD-NRDEKIGYKIREARSLDRVPYM 545

Query: 433 IIQGTGERSRGMLQIKDLA 451
           +I G  E     + ++D +
Sbjct: 546 LIIGEKEVEAHNISVRDRS 564



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +RN + D    +   + ++ + TP +  S SL +     D   + +++ 
Sbjct: 214 GSPFWLPNGMAVRNALTDYWHEMMVKFNYEEVLTPQI-LSRSLWETSGHWDHYKENMYT- 271

Query: 74  QDDDGQWISLRYDLTAPLA 92
              D +  +++        
Sbjct: 272 TSVDEEDFAIKPMNCPGAC 290


>gi|242791014|ref|XP_002481676.1| threonyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218718264|gb|EED17684.1| threonyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 724

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/440 (9%), Positives = 101/440 (22%), Gaps = 68/440 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  ++TP +   D  + K        +  +F 
Sbjct: 320 GCPFLLPHGTKIFNALQKLLRAEYRKRGYQEVQTPNM--YDVGIWKTSGHWAHYSDDMFK 377

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+             +F       R+YR  P+   +     R        
Sbjct: 378 L-DVEKREWALKPMNCPG-------HFMLFGHRERSYRELPLRIADFGVLHRNEASGALH 429

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                   +  D+ +          +    +     + +   L G   K+ L    +   
Sbjct: 430 GLTRVRKFQQDDSHIFCTSEQITSEIEGIFD----FLKSVYGLFGFTFKLKLSTRPEKYM 485

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             +          +  + ++  L   + D+                             +
Sbjct: 486 GELEAW------NYAEEQLRQALNNFKGDDW---------------------------EI 512

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
           +E      G        + L    +           I                 ++    
Sbjct: 513 NEGDGAFYGPKIDITISDALKRDFQCATIQLDYQAPI----------------NFKLEYI 556

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                               +              A   S      I+           +
Sbjct: 557 TNEKQAGSDAKANKDDTEKAKESNANRARPVVIHRAIIGSFERFLGILIEHFAGKWPFWL 616

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                +++  M   +D     +   + L       ++ +  +     +++          
Sbjct: 617 SPRQILIVPVMPALND---YAKELQENLLADKFNVDVDVSGN-TLQKKIRTGQLAQYNFI 672

Query: 433 IIQGTGERSRGMLQIKDLAK 452
            + G  E+    + I++   
Sbjct: 673 FVVGAQEKESRSVNIRNRDD 692


>gi|307564422|ref|ZP_07626963.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346782|gb|EFN92078.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 650

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 3/128 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +          +   Q L  + +R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPVS--EKYNDYARKVKQQLDASDVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A +    ++  G +++  + +  P  ++ G  E + G++ ++    G++ +  +K     
Sbjct: 578 ALID-DRNEKVGRKIRDNELKRIPYMVVVGEKEAAEGLVAMRKQGGGEQSTMPVKAFIER 636

Query: 467 REARVAQI 474
            +A VA+ 
Sbjct: 637 VKAEVAEQ 644



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           +G      K  ++R R+ D +R + + Y +  + TP +   +      
Sbjct: 263 KGLPIWLPKGTQLRLRLQDMLRKLLKPYNYQEVITPGIGSKNLYITSG 310


>gi|260911765|ref|ZP_05918337.1| proline-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634091|gb|EEX52209.1| proline-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 493

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 59/207 (28%), Gaps = 13/207 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V ++  ++         + S   R          EA++      +       G     
Sbjct: 194 LDVYAKFAQEWMAVPVVCGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 +++               +RLI AL                    V++  +   
Sbjct: 254 SFDVTFLNKENKPEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPRLAPIQVVVIPIGKG 313

Query: 387 SDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + +     K Q   + LR  G+  +     +K  G   KYAD   +  P+ ++ G  + 
Sbjct: 314 DEQMKAIANKLQPVIEQLRKVGVTVKYDDSDNKRPG--FKYADYELKGIPVRVVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWR 467
               ++I      ++ +   +      
Sbjct: 372 ENNTVEIMRRDTLEKETIGFEGLAEHI 398


>gi|260557205|ref|ZP_05829421.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260409311|gb|EEX02613.1| prolyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 571

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 44/160 (27%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + SL +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPA-SLWEESGRYEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D       L     ++   LAR   +++  +          +R     R   
Sbjct: 90  GPELLRFKDRHDNPFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLG 189


>gi|240122983|ref|ZP_04735939.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 648

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|194098020|ref|YP_002001068.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|193933310|gb|ACF29134.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 648

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|68535685|ref|YP_250390.1| glycyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|68263284|emb|CAI36772.1| glycyl-tRNA synthetase [Corynebacterium jeikeium K411]
          Length = 459

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 32/95 (33%), Gaps = 3/95 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           + +  +          +     LR  G    +   +S   G + +  D    P  +    
Sbjct: 366 IAVLPLSKKESLTPTAEKIAGQLR--GFW-NVDYDTSGAIGRRYRRQDEIGTPFCVTVDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  + +++    ++   +I++ +S+   R+A
Sbjct: 423 DTLEDNAVTVRERDTMEQERIKIEDLQSYFAERLA 457


>gi|59800743|ref|YP_207455.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|73919809|sp|Q5F9U4|SYT_NEIG1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|59717638|gb|AAW89043.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 637

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|42519522|ref|NP_965452.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|73919800|sp|Q74IC0|SYT_LACJO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|41583811|gb|AAS09418.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 643

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 44/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 499 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNEEAHGEY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  L   G RAE+    ++  G +++ +  +  P  ++ G  E +   + ++    
Sbjct: 559 ADKVRAELAKRGFRAEVDH-RNEKLGYKIRESQTQKVPYTLVLGDEEMNANGVNVRRYGT 617

Query: 453 GKELSREIKNNESWREA 469
            +++S+ + +  +  +A
Sbjct: 618 EEQISKSLDDFIAEIDA 634



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 53/176 (30%), Gaps = 13/176 (7%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  + + +  G++ + TP+L   D+  K           +F
Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVAD--GYEHVYTPVLMNVDAY-KTSGHWAHYRDDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 375

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
           R                    A++  ++ D  +   I    + +   + K  D   
Sbjct: 376 REMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDYYFRLSYRDPKNTDKYY 431


>gi|297379344|gb|ADI34231.1| threonyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 612

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 1/120 (0%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               +A+ S     N    + P  I  +  + +         + L+   I  E+   +  
Sbjct: 493 FERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVEVLDKND- 551

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           +   +++ A+++  P+ ++ G  E    +L I+D  K  +    +K   +  E+++ +++
Sbjct: 552 SLNKKVRSAEKQKIPMILVLGNEEVGTEILSIRDREKQAQYKMPLKEFLNMVESKMQEVS 611



 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R RI D +       G++P++ P +  SD   K     D   + ++  
Sbjct: 238 GLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDV-WKISGHYDNYKENMY-F 295

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D Q   ++        +       +       +    V    +            + 
Sbjct: 296 TTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREF 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    +  ++   ++  L                 KI+        +    +  + 
Sbjct: 356 TQDDAHIFCSFEQIQSEVSAIL-------------DFTHKIMQAFDFSYEMELSTRPAKS 402

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +   +  +K      + +K    + + D  G    G  +  +  D +         +   
Sbjct: 403 IGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDM 462

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E  K     E    E
Sbjct: 463 NLPERFKLAFTNEYNHAE 480


>gi|240115143|ref|ZP_04729205.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291044371|ref|ZP_06570080.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291011265|gb|EFE03261.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 648

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|284166966|ref|YP_003405245.1| glycyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016621|gb|ADB62572.1| glycyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 593

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 34/109 (31%), Gaps = 5/109 (4%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V +  + +D +  ++       LR  G+        S N G + +  D    P  + 
Sbjct: 488 PTFVGVFPLQNDEELEAQANEIVADLREVGLSVT--YDDSGNIGRRYRRQDEVGTPFCVT 545

Query: 435 QGTG--ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                 E     + +++     +    + +      A + +  +   EL
Sbjct: 546 VDYETVEDEETTVTVRERDTTDQKRLPVDDLAETLSA-IREGDLAFEEL 593


>gi|284044947|ref|YP_003395287.1| prolyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283949168|gb|ADB51912.1| prolyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 560

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 47/165 (28%), Gaps = 14/165 (8%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+  R+   IR   +  G   +  PLL  ++   +           +F L+D  
Sbjct: 43  YLPAGWRVHRRVEQIIREEMDAIGGQEMLMPLLNPAEPWRRTGR---IEIDEIFKLEDRK 99

Query: 78  GQWISLRYDLT---------APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           G  + L   +T         A + R   +    +       R  P  R        FR  
Sbjct: 100 GTEMVLA--MTHEEIVTTHVAQVVRSYRDLPQILYQIQVKERDEPRPRAGVLRTREFRMK 157

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                D   +  E + A+  +      E  G++       +    
Sbjct: 158 DSYSFDRDEAGLEESYAKHIVAYDRIFERTGLEWYRVESDVGMMG 202



 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 33/99 (33%), Gaps = 1/99 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      L+     +S+  +      + L+  G+   ++       G +   A+ 
Sbjct: 453 AWPRALAPFDAELVVISRGESEERAFADRLYEELKATGLDV-LYDDRDAGPGEKFADAEL 511

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              PL +  G    + G L+++     +  S  ++    
Sbjct: 512 LGAPLRVTVGKRTLAAGELEVQLRRGRERRSVPLEGAAE 550


>gi|91762425|ref|ZP_01264390.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718227|gb|EAS84877.1| Threonyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 638

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 1/80 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +    +  +  +   + +  AGI +E+ L +  N   +++       PL +I G  E 
Sbjct: 544 VVIPISEEFDTYAKEVNEKINNAGISSEVDLKNH-NLNYKIREHSLSKIPLLLICGKKEV 602

Query: 441 SRGMLQIKDLAKGKELSREI 460
               + I+ L   K+ + E+
Sbjct: 603 DSNSVTIRRLDTNKQENMEL 622



 Score = 44.1 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 4/113 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKGVFS 72
           G      K  ++  +++  +R   E  G+  + TP  E  D SL +     ++  + +++
Sbjct: 262 GSVFWHEKGWKLFQKLVAYMRARQEKAGYKEVNTP--EILDRSLWEKSGHWEKYGEHMYT 319

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            Q  D +  +++        +   +   +    P R    G V R E  G   
Sbjct: 320 SQTPDEKIFAIKPMNCPGHVQVFNQGLKSYRDLPLRISEFGKVHRYEPSGALH 372


>gi|268603124|ref|ZP_06137291.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268587255|gb|EEZ51931.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 637

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|240117427|ref|ZP_04731489.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 648

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|240080190|ref|ZP_04724733.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 648

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|169794838|ref|YP_001712631.1| prolyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213157835|ref|YP_002320633.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215482385|ref|YP_002324567.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301345755|ref|ZP_07226496.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301511535|ref|ZP_07236772.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301594855|ref|ZP_07239863.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332852292|ref|ZP_08434097.1| proline--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332870515|ref|ZP_08439279.1| proline--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|226695840|sp|B7GWV6|SYP_ACIB3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226695841|sp|B7I854|SYP_ACIB5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226731418|sp|B0V4Y6|SYP_ACIBY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169147765|emb|CAM85628.1| prolyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213056995|gb|ACJ41897.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213986493|gb|ACJ56792.1| prolyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|332729422|gb|EGJ60762.1| proline--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332732252|gb|EGJ63520.1| proline--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 571

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 44/160 (27%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + SL +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPA-SLWEESGRYEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D       L     ++   LAR   +++  +          +R     R   
Sbjct: 90  GPELLRFKDRHDNPFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLG 189


>gi|329667761|gb|AEB93709.1| threonyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 643

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 44/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 499 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNEEAHGEY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  L   G RAE+    ++  G +++ +  +  P  ++ G  E +   + ++    
Sbjct: 559 ADKVRAELAKRGFRAEVDH-RNEKLGYKIRESQTQKVPYTLVLGDEEMNANGVNVRRYGT 617

Query: 453 GKELSREIKNNESWREA 469
            +++S+ + +  +  +A
Sbjct: 618 EEQISKSLDDFIAEIDA 634



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 53/176 (30%), Gaps = 13/176 (7%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  + + +  G++ + TP+L   D+  K           +F
Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVAD--GYEHVYTPVLMNVDAY-KTSGHWAHYRDDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 375

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
           R                    A++  ++ D  +   I    + +   + K  D   
Sbjct: 376 REMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDYYFRLSYRDPKNTDKYY 431


>gi|300933216|ref|ZP_07148472.1| glycyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 459

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 31/95 (32%), Gaps = 3/95 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +          +     LR  G+   +    S   G + +  D    P  +    
Sbjct: 366 VAVLPLSKKDTLTPTAEKVANQLR--GLW-NVDYDVSGAIGRRYRRQDEIGTPFCVTVDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  + +++    ++   +I + +++   R+A
Sbjct: 423 DTLEDNAVTVRERDTMEQERVKIDDLQAYLGERLA 457


>gi|240016048|ref|ZP_04722588.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 648

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|240013609|ref|ZP_04720522.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240112403|ref|ZP_04726893.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240120679|ref|ZP_04733641.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 648

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|153010341|ref|YP_001371555.1| ATP phosphoribosyltransferase regulatory subunit [Ochrobactrum
           anthropi ATCC 49188]
 gi|229464977|sp|A6X3C2|HISZ_OCHA4 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|151562229|gb|ABS15726.1| tRNA synthetase class II (G H P and S) [Ochrobactrum anthropi ATCC
           49188]
          Length = 376

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
           + +S+R   +    + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 9   VFNSLRATLDMREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 66

Query: 89  APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
            P+ R           P R   +G VFR  + G   F
Sbjct: 67  IPVCRNHIA--LNAATPKRYAYLGEVFRQHRDGAAEF 101


>gi|88657649|ref|YP_506841.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123750088|sp|Q2GI92|SYT_EHRCR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|88599106|gb|ABD44575.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 633

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 66/247 (26%), Gaps = 12/247 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   + +TSE +      + I  +    ++            G +E+   +E   
Sbjct: 381 DDAHIFCTESQITSEALKFCNLLIEIYKDFGFTDILVKFSDRPKNRAGSDEIWDKAEAAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
           K       +        G  Y     +   +AI         Q   V     G       
Sbjct: 441 KKSVEVANLSYVLNPGDGAFYGPKLEFTLKDAIGREWQCGTLQMDFVLPERLGAYYIGSD 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             +     +           + + ++              + I T+  DS + +      
Sbjct: 501 GKKHHPVMLHRAILGTFERFIGILIEHHSGKFPMWLAPIQLSILTISEDSINYANSLKIK 560

Query: 398 QMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                  IR E+   + K      N +        P+  I G  E     + I+ L   K
Sbjct: 561 AE--EHNIRVELDTTNEKINYKIRNHIHK----KVPVFWIVGKKEVEENSVSIRYLESNK 614

Query: 455 ELSREIK 461
           +    I 
Sbjct: 615 QHVMPID 621



 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 25  IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
           I   I + IR   EN G+  ++TP+L   +   K     D+  + +F L + + + ++++
Sbjct: 272 IYRIIENYIRKKLENNGYIEVKTPILLNKELWEKS-GHWDKFRENMF-LSEAEDKTLAIK 329

Query: 85  YDLTA 89
                
Sbjct: 330 PMNCP 334


>gi|15922515|ref|NP_378184.1| threonyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|15623305|dbj|BAB67293.1| 267aa long hypothetical threonyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 267

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 4/105 (3%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           +   +     ES       + P+ +  +    D +         +   G R ++      
Sbjct: 133 TYYYLLSAQKESPPTLPIWLSPIQVRILPVKQDFVKSAIEIASKI--NG-RVDVDDLPDG 189

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
             G ++  A +   P  +I G  E     L +K   + ++ S  I
Sbjct: 190 -LGAKIARAGKDWIPYVVILGEREIKTLSLTVKVRKRNEQRSYTI 233


>gi|124265710|ref|YP_001019714.1| prolyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|152112930|sp|A2SD40|SYP_METPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|124258485|gb|ABM93479.1| prolyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 581

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 37/104 (35%), Gaps = 4/104 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +   L  G        +R+  ++   IR      G   +  P+++ ++ L +     ++ 
Sbjct: 31  MIKRLGAGIYSYMPMGLRVIRKVEAIIREEMNRAGAVELLMPVVQPAE-LWQETGRFEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
              +  ++D   +   ++    ++   +AR    ++  +     
Sbjct: 90  GPELMRVKDRHDRDFIIQPTSEEVVTDIARQELRSYRQLPKNFY 133


>gi|332157838|ref|YP_004423117.1| glycyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331033301|gb|AEC51113.1| glycyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 571

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 18/48 (37%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       I+ +I   IR  +   GF  IETP +          
Sbjct: 32 RGFYDYGPLGATIKRKIERKIREAFIREGFFEIETPDITPEQVFIASG 79



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 30/104 (28%), Gaps = 4/104 (3%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ-LKYADRRNC 429
                  V +  +       S      + L+  G           + G + ++Y D    
Sbjct: 470 KDMAPIEVAVLPLVAKEPLTSIAYNLYRRLQRDGFIV--VYDEKDSIGKRYMRY-DEIGT 526

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           P  +         G + I+D    +++  +I+         + +
Sbjct: 527 PYCVTIDNQTPEDGTVTIRDRDTREQIRVKIEEVPKKLRQLIFE 570


>gi|288927557|ref|ZP_06421404.1| proline--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330391|gb|EFC68975.1| proline--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 493

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 58/207 (28%), Gaps = 13/207 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V ++  +          + S   R          EA++      +       G     
Sbjct: 194 LDVYAKFAQDWMAVPVVCGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 +++               +RLI AL                    V++  +   
Sbjct: 254 SFDVTFLNKENKPEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKLAPIQVVVIPIGKA 313

Query: 387 SDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
              +     K Q   + LR AG+  +     ++  G   KYAD   +  P+ I+ G  + 
Sbjct: 314 GQQMQAIADKLQPVIEQLRKAGVTVKYDDSDNRRPG--FKYADYELKGIPVRIVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWR 467
               ++I      ++ +   +      
Sbjct: 372 ENNTVEIMRRDTLEKETIGFEGLAEHI 398


>gi|268683833|ref|ZP_06150695.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268624117|gb|EEZ56517.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 637

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|262038762|ref|ZP_06012119.1| threonine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747220|gb|EEY34702.1| threonine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 636

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/106 (10%), Positives = 35/106 (33%), Gaps = 3/106 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + + N++ +  R  ++   ++ I TP++   + L +         + +++ 
Sbjct: 260 GFPFFMPKGMELMNKLQEIWRKEHKKRKYEEIRTPVMLDKE-LWEISGHWFNYRENMYTS 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +  D +  +++            +N                  +  
Sbjct: 319 EI-DEKVYAIKPMNCPGSIIAY-KNNLHSYKDLPLKYGEMGLVHRH 362



 Score = 36.7 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 3/107 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +        + R I  L    +       + PV    +    + +  
Sbjct: 493 SYIGADGEKHEPVMIHRAMYGSMERFIGILIEHYAGAFP-TWLAPVQARILTISKEQVPF 551

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD-RRNCPLAIIQGTG 438
            +   + L+ AGIR ++     +  G +++ A+  +  P+ +I G  
Sbjct: 552 AEKLYEELQEAGIRVDID-TRDEKIGYKIREANGDQKIPVQLIIGKN 597


>gi|239998484|ref|ZP_04718408.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240125235|ref|ZP_04738121.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|317163762|gb|ADV07303.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 648

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|254493203|ref|ZP_05106374.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268598466|ref|ZP_06132633.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|226512243|gb|EEH61588.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268582597|gb|EEZ47273.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 637

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|289582184|ref|YP_003480650.1| prolyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289531737|gb|ADD06088.1| prolyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 493

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 99/398 (24%), Gaps = 21/398 (5%)

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
            +  E         +       V      A  E      D         N Y        
Sbjct: 20  EWYAEVVQKANLADYAPMGGFIVTKPRGYALWEAIQDALDGWFKETGVDNVYFPMFIPES 79

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
            L+   EK  + G D     +      +  ++  ++     +      +     +   L 
Sbjct: 80  FLE--REKDIVEGFDPEVAWVTHGGHDELEERLAVRPTSESIIAPFMADWTRSHRDLPLR 137

Query: 234 SEQIDIMVSFLSIDLEKSMH----ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
             Q   +V + + + +           E        E  + E+    +   K       I
Sbjct: 138 LNQWCSVVRWEATETKPFFRTKEFMWQEGHTAHATDESAWEEVWTRLDQYEKVYEEVLAI 197

Query: 290 K----ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
                      +     T    EA++      +       G           V   + + 
Sbjct: 198 PVLRGKKPEHDKFPGADTTTTVEALMPDGKSVQGATSHNLGQSFAEAFDISFVDEDEEER 257

Query: 346 VPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHDS---DSLSKYQMYT 397
              T       R + AL                    V I  +  +    D L   Q   
Sbjct: 258 TAYTTSWGLSWRALGALIMTHSDDQGLVLPPTIAPTQVAIVPIWQEETKADVLEYSQNIA 317

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L  AG   E+     +N G +    +    PL +  G  E     + +      +E  
Sbjct: 318 DELEEAGFSVELDDRDERNPGFKFNEHELNGVPLRLEIGPYEVEDEEVTLVHRPDNEE-- 375

Query: 458 REIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
             +++ +   +A    +     +L  T  + L+EN  E
Sbjct: 376 -AVEDRDGIVDAVDDHLETIFDKLYDTAAENLEENVRE 412


>gi|156042356|ref|XP_001587735.1| hypothetical protein SS1G_10975 [Sclerotinia sclerotiorum 1980]
 gi|154695362|gb|EDN95100.1| hypothetical protein SS1G_10975 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 791

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/478 (8%), Positives = 107/478 (22%), Gaps = 59/478 (12%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N I   +R  Y   G++ + TP +  S+ L K           +F+   + 
Sbjct: 350 WLPHGARIYNTIQSFLREEYWKRGYNEVITPNMYNSE-LWKTSGHWAYYKDDMFTFPVEK 408

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               +L+                               R        F    + +     
Sbjct: 409 D-VFALKPMNCPG-------------HCLMFGHRERSHRELPWRVADFGVLHRNEASGAL 454

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     IK     +    R I   +     L    +  + L  +
Sbjct: 455 TGLTRVRRFQQDDAHIFCREDQIKDEITGLFDFLRAIYGLLGFTFKLKLSTRPEKFLGKI 514

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D         ++  L E         +    +  E  +   +F    ++ ++ +  +
Sbjct: 515 ETWD----MAEDKLRSALDEF-------ASSDGGVPWELNEGDGAFYGPKIDITICDCLK 563

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
                                ++          +                 A+    V  
Sbjct: 564 R--------------EWQCATIQLDFQLPQNFGLEYNTGDVPTKKEE---AAVKEPVVKP 606

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
           +K       +V     Y  L        +     +  I R    L    +          
Sbjct: 607 KKDTEPEDPNVPKERVYKPLTPGCARPVMIHRAMAGSIERFTAILIEHFAGKWPFWLSPR 666

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             I  +          +    +     +  ++ L  +     +++           + G 
Sbjct: 667 -QILVIPVGVGYFEYAKEVQSIFHKQQMFIDVDLSGN-TLQKKIRTGQLAQYNFIFVVGD 724

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
            E +   + +++                   ++     + + E +  +  +  E + +
Sbjct: 725 TEMNGREVNVRNRDD--------------TSSQDRGKPVSLQEAIEKLTALRDERRSD 768


>gi|268596339|ref|ZP_06130506.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268550127|gb|EEZ45146.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 638

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 536 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 595 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 638



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 262 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 320 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 371


>gi|237785631|ref|YP_002906336.1| threonyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758543|gb|ACR17793.1| Threonyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 663

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 12/124 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +     V I   D  S  L +       LR  G+RAE+ +   +    +++   
Sbjct: 543 GAFPAWLAPHQVVGIPVADEFSPYLGE---VVDKLRARGVRAEVDISDDR-MQKKIRNHT 598

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISE 480
               P  ++ G  +   G +  + L  G +     + + +    +W E    +   P  E
Sbjct: 599 THKAPFMLLAGGRDAEAGAVSFRFL-DGSQVNGVPVEKAVDVISTWVEEHNNEQ--PTKE 655

Query: 481 LVST 484
           L+  
Sbjct: 656 LIEA 659



 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            GF         +RN +    R  +   G+  + TP L   D   K     D    G+F
Sbjct: 259 SGFPVFHPDGGIVRNEMEQHSRRRHIEAGYSFVYTPHLTKGDLFQKS-GHLDFYKDGMF 316


>gi|187931727|ref|YP_001891712.1| threonyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|238691566|sp|B2SGS3|SYT_FRATM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|187712636|gb|ACD30933.1| threonyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 634

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/449 (12%), Positives = 114/449 (25%), Gaps = 91/449 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI  ++ D +R     YG   I TPL+       K        +K     
Sbjct: 260 GIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSG----HASK----- 310

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                 AEN                 ++E              V
Sbjct: 311 ---------------------YAENM-------------FATKSENRDFAIRPMNCPTCV 336

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       M    +          H  +  R                +    
Sbjct: 337 QVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVI 396

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG     + +     +  GD                       +++  
Sbjct: 397 LMVQQCFEVYKDFGFNDFAVKIALRPENRIGD-----------------------DETWD 433

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL+                 +   I R  +  T  +       
Sbjct: 434 KSEQMLKNALDANNVSYELLPGEG---AFYGPKIEFHLKDAIGRSWQCGTIQL------- 483

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D    +     +           + + ++    +     
Sbjct: 484 --------DFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLW- 534

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M   ++     +    ML   GIRA++ L  ++  G +++       P  +
Sbjct: 535 -LAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDL-RNEKIGFKIREHTLLRVPYLV 592

Query: 434 IQGTGERSRGMLQIKDLAKGK---ELSRE 459
           I G  E+ + ++ I+    G+   ++S +
Sbjct: 593 ILGKNEQEQKIITIRK-HSGEDLGQMSVD 620


>gi|260578228|ref|ZP_05846146.1| glycine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603643|gb|EEW16902.1| glycine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 484

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 32/95 (33%), Gaps = 3/95 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           + +  +          +     LR  G    +   +S   G + +  D    P  +    
Sbjct: 391 IAVLPLSKKETLTPTAEKIAGQLR--GFW-NVDYDTSGAIGRRYRRQDEIGTPFCVTVDF 447

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  + +++    ++   +I++ +S+   R+A
Sbjct: 448 DTLEDNAVTVRERDTMEQERIKIEDLQSYFAERLA 482


>gi|227111545|ref|ZP_03825201.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 642

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/349 (12%), Positives = 95/349 (27%), Gaps = 10/349 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVMWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N I+ +     G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAAALTENNIEFAYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    ++            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQAVIINITDSQSDYVNELTRKLQEAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQITI 476
           ++ G  E   G + +     KDL          K  +  R   + Q+ +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVISKLQQEIRSRSLHQLEV 642



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/205 (6%), Positives = 52/205 (25%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   ++Y +  ++ P       + +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGP-FMMDRVMWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 425 EKRIGSDEMWDRAEADLAAALTENN 449


>gi|297195484|ref|ZP_06912882.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197722098|gb|EDY66006.1| threonyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 657

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +        I R    L    +       + PV    +      +  
Sbjct: 515 EYTGPDGTKHRPVMIHRALFGSIERFFAVLLEHYAGAMP-PWLAPVQAVGIPIGDAHVEY 573

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q +    +  G+R E+   S +    +++   +   P  II G  + + G +  +    
Sbjct: 574 LQDFAADAKKKGLRVEVDSSSDR-MQKKIRNQQKLKVPFMIIVGDDDMNAGTVSFRY-RD 631

Query: 453 GKELSREIKNNESWREARVAQITI 476
           G + +   + +   + A V +  +
Sbjct: 632 GSQENGIPREDALAKIADVVERRV 655


>gi|14591389|ref|NP_143467.1| glycyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|11387128|sp|O59235|SYG_PYRHO RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
          ligase; Short=GlyRS
 gi|3258043|dbj|BAA30726.1| 570aa long hypothetical glycyl-tRNA synthetase [Pyrococcus
          horikoshii OT3]
          Length = 570

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 18/48 (37%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       I+ +I   IR  +   GF  IETP +          
Sbjct: 32 RGFYDYGPLGATIKRKIERKIREAFIREGFFEIETPDITPEQVFIASG 79



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 4/94 (4%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ-LKYADRRNC 429
                  V +  +       +      + L+  G           + G + ++Y D    
Sbjct: 470 KDMAPIEVAVLPLVAKEPLTTIAYEIYRTLQKEGFIV--VYDEKDSIGKRYMRY-DEIGT 526

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           P  +         G + I+D    +++  +I+  
Sbjct: 527 PYCVTVDNQTPEDGTVTIRDRDTREQIRVKIEEL 560


>gi|293399557|ref|ZP_06643710.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291610126|gb|EFF39248.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 648

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|268594343|ref|ZP_06128510.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268547732|gb|EEZ43150.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
          Length = 638

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 536 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 595 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 638



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 262 GMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 320 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 371


>gi|268319910|ref|YP_003293566.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785]
 gi|262398285|emb|CAX67299.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785]
          Length = 643

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 44/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++      
Sbjct: 499 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNEEAHGEY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  L   G RAE+    ++  G +++ +  +  P  ++ G  E +   + ++    
Sbjct: 559 ADKVRAELAKRGFRAEVDH-RNEKLGYKIRESQTQKVPYTLVLGDEEMNANGVNVRRYGT 617

Query: 453 GKELSREIKNNESWREA 469
            +++S+ + +  +  +A
Sbjct: 618 EEQISKSLDDFIAEIDA 634



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 55/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  + + +  G++ + TP+L   D+  K           +F
Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVAD--GYEHVYTPVLMNVDAY-KTSGHWAHYRDDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 375

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                    A++  ++ D  +   I    + +   + K  D       
Sbjct: 376 REMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDYYFRLSYRDPKNTDKYYANDE 435

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 436 MWEKSQSM 443


>gi|254167669|ref|ZP_04874520.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596979|ref|YP_003483675.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623478|gb|EDY36042.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534766|gb|ADD09113.1| threonyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 612

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/187 (8%), Positives = 45/187 (24%), Gaps = 1/187 (0%)

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
               +    ELV +            R              +     A+    +  E  +
Sbjct: 384 YEENKDFIRELVKLVNRPVLIQMWDERFFYFVLKFEFNFVDSLNKAAALSTVQIDVENAE 443

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                     G            +         +         +         + P  + 
Sbjct: 444 RYGITYYDENGNERYPYILHCSPSGAVERILYAMLEKADMDAKMGKKPKLPVWLSPTQVR 503

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +    D +          R+   R ++      +   +++ A++   P  ++ G  E+ 
Sbjct: 504 IIPVKDDFIGCSIQEMDYFRSEEFRVDID-DRDLSVSRKIRDAEKEWIPYIVVIGEKEKE 562

Query: 442 RGMLQIK 448
           + +L ++
Sbjct: 563 KDILTVR 569


>gi|303238626|ref|ZP_07325159.1| glycyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593745|gb|EFL63460.1| glycyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 462

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/226 (9%), Positives = 52/226 (23%), Gaps = 7/226 (3%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +         +       K  +                   K                +
Sbjct: 242 WKNYCFNWLLNLGINQDSLKMRDHEKEELSHYSN-ATTDIEFKFPFGWGELWGIADRTDF 300

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK-SLE 366
           +  L   + + K     F            +    G +     F           +  + 
Sbjct: 301 D--LKQHMTHSKDDLSYFDPTTNEKYVPYCIEPSLGADRVTLAFLCDAYDEEEVAEGDVR 358

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +    + PV I  +              + L T     E     + + G + +  D 
Sbjct: 359 VVLHFHPAIAPVKIAILPLSKKLGDDAYKVYEAL-TKKYVCE--YDETGSIGKRYRRQDE 415

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P  I           + I+D    +++  +I++ +++ E +  
Sbjct: 416 IGTPYCITFDFDSLEDKSVTIRDRDNMQQVRVKIEDLDNYFEGKFE 461


>gi|238916041|ref|YP_002929558.1| prolyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|259511595|sp|C4Z1D7|SYP_EUBE2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|238871401|gb|ACR71111.1| prolyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 479

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 19/117 (16%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I  M   +  L K     Q L+ AG+R ++   S KN G +    + R  P+ +  G  +
Sbjct: 297 IPIMQKKAGVLDKAYEVGQALKAAGLRVKVD-DSDKNPGWKFSEQEMRGIPVRVEMGPRD 355

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                  I                   R     +IT+ I EL   + +IL   ++++
Sbjct: 356 IEANQAVI------------------VRRDTREKITVSIDELADRIPEILDTIQKDM 394


>gi|223984654|ref|ZP_03634777.1| hypothetical protein HOLDEFILI_02073 [Holdemania filiformis DSM
           12042]
 gi|223963395|gb|EEF67784.1| hypothetical protein HOLDEFILI_02073 [Holdemania filiformis DSM
           12042]
          Length = 566

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 7/85 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK+        G         ++  +I + +R   +  G   +  P L   +      
Sbjct: 31  MIKKSS------AGVYMYLPLGYKVLKKIENIVREEMDQAGSQELLMPALIPEEVYVAS- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +FSL+D   +   L  
Sbjct: 84  GRRDNFGSSMFSLKDRFNKSYVLGP 108



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 2/108 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              NI      ++     D   ++  +     L+ AG+   +     +  G + K  D  
Sbjct: 461 WPINIAPYPVAIVVIAKKDEQQMAAAEQLYAQLQAAGVDVMLDDRDER-PGVKFKDMDLI 519

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             P+ +  G      G++++K     K     I N  +     + Q  
Sbjct: 520 GTPIRLTVGKK-IGDGLVEMKLRKAEKAEDISIDNVVAKVLELIHQGE 566


>gi|126725645|ref|ZP_01741487.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704849|gb|EBA03940.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 649

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/397 (10%), Positives = 103/397 (25%), Gaps = 33/397 (8%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N   I    + +                +   +   +  G   +  +    + + +    
Sbjct: 274 NGWRIYTTLQDFMRRKQVAGGYVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAR 333

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
                    +       +  +  K       ++ E     R        G+  V+     
Sbjct: 334 EKAVNALKPMNCPCHVQIFNVGLKSYRDLPIRMAEFGSCNRYEPSGALHGIMRVRG---- 389

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D+   F + + +  E    +    SI  +                  G +E+   +E
Sbjct: 390 FTQDDGHIFCEESQIEEETAIYIEFLTSIYKDLGFENFRVKFSDRPEVRAGSDEVWDRAE 449

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
               +   +  I+       G  Y     +  +      + +        V         
Sbjct: 450 TALLNATRAAGIEPEMNPGEGAFYGPKLEF-VLTDAIGRDWQCGTHQVDFVLPERLDANY 508

Query: 338 VSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           V +   ++ P              + + ++              V++ ++  D++     
Sbjct: 509 VGQDGAKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIVTDAN--DYA 566

Query: 394 QMYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           Q     LR AG+ AE  + + K        + G           P+ +  G  E +   +
Sbjct: 567 QEVVAELRAAGVLAEADIRNEKINYKVREHSLGK---------VPVILAVGMKEVAERTV 617

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            ++ L    +    ++       A   + T P  +LV
Sbjct: 618 SVRRLG---QKQSTVQELGEVVPALAIEATPP--DLV 649


>gi|311895944|dbj|BAJ28352.1| putative glycyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 460

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  ++D   K +     LR+A    E     +   G + +  D    P  +    
Sbjct: 367 VAVLPLSRNADLSPKARGLAADLRSA-WNVEFD--DAGAIGKRYRRQDEIGTPFCVTVDF 423

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + ++D     +    +   +S+   R
Sbjct: 424 DTLEDNAVTVRDRDTMAQERVSLDQVKSYLATR 456


>gi|260548877|ref|ZP_05823099.1| prolyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260408045|gb|EEX01516.1| prolyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 571

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 44/160 (27%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + SL +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPA-SLWEESGRYEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D       L     ++   LAR   +++  +          +R     R   
Sbjct: 90  GPELLRFKDRHDNPFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLG 189


>gi|227549145|ref|ZP_03979194.1| threonyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078786|gb|EEI16749.1| threonyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 884

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 60/434 (13%), Positives = 119/434 (27%), Gaps = 41/434 (9%)

Query: 69  GVFSLQDDDGQWI-SLRYDLTAPLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            +FS  D+ G  +     D    + R   E       I           V +        
Sbjct: 273 DLFSFPDELGSGLPVFHPDG--GIIRLAMEDHSRRRHIEAGYSFVNTPHVTKGSLFSKSG 330

Query: 125 FRQFIQCDVDN---VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
              +    +     +    +     +       ++ +    ++       R   +  L  
Sbjct: 331 HLDWYADGMFPPMKLDGEIDDDGNVVKQPQDYYVKPMNCPMHNLIFDSRGRSYRELPL-- 388

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                  +L E   V R        GL   +    +       +    A LTS  ++ ++
Sbjct: 389 -------RLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEAELTS-VLEFII 440

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           S L            EL         G +E+   S  + +S    + +++         Y
Sbjct: 441 SLLKDYGLNDF--YLELSTKDPQKYIGDDEIWQRSTDILQSVAEKSGLELVPDPAGAAFY 498

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-----PATGFSIGIS 356
                 +A        +     V        R+D   +   G            F     
Sbjct: 499 GPKISVQARDAIGRTWQ--MSTVQLDFNLPERFDLTYTAPDGTKKRPVMIHRALFGSIER 556

Query: 357 RLIVALKS-LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
              V L+    +    +     V I   D  +  L      TQ LR  GIRAE+     +
Sbjct: 557 FFGVLLEHYAGAFPAWLAPHQVVGIPVADDFAGHLD---SVTQKLRERGIRAEVDHSDDR 613

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREAR 470
               +++       P  ++ G  +     +  + L  G +     ++  +   ++W   R
Sbjct: 614 -MQKKIRNHTTSKVPFMLLAGARDVEADAVSFRFL-DGTQVNGVPVAEAVDIIDAWVSER 671

Query: 471 VAQITIPISELVST 484
           + +   P  E V+ 
Sbjct: 672 INEQ--PSEETVAA 683


>gi|269925242|ref|YP_003321865.1| threonyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788902|gb|ACZ41043.1| threonyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 596

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      +   +          +R  +   + +    +++ A  +  P  +
Sbjct: 496 WLSPVQVVVIPIADRHIPYAEEVASAFSRHNVRVNVDARNER-MNAKIRDAQMQKIPYML 554

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           I G  E   G + ++    G+
Sbjct: 555 IVGDREAQAGTVAVRK-RSGE 574



 Score = 43.3 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 57/220 (25%), Gaps = 18/220 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF-- 71
           G          IR  + + I       G+  + TP +       K           +F  
Sbjct: 216 GLVLWLPNGSIIRRELENFIVKAEAREGYQHVYTPHIAKLGLY-KTSGHWQHYRDAMFPP 274

Query: 72  -SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
             L+D  G+   LR  +T P       +        R+YR  P+   E     R+ +  +
Sbjct: 275 MVLED--GEEYELRP-MTCP------HHIMIYKHSLRSYRDLPLRIAELGTVYRYEKSGE 325

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
               +        DA +        E         H         D +         DK 
Sbjct: 326 LTGMSRVRGFTINDAHIFCRPDQLKEEFIRVIQLMHEVYRAVGFHDYVYRLSLRDPSDKE 385

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
                     D++       ++  L E   D      + A
Sbjct: 386 KYVE-----GDEMWNNAENAIRQALDELGADYVEAEGEAA 420


>gi|150866832|ref|XP_001386559.2| prolyl-tRNA synthetase, cytoplasmic [Scheffersomyces stipitis CBS
           6054]
 gi|149388088|gb|ABN68530.2| prolyl-tRNA synthetase, cytoplasmic [Scheffersomyces stipitis CBS
           6054]
          Length = 572

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 77/536 (14%), Positives = 162/536 (30%), Gaps = 64/536 (11%)

Query: 12  PR-GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           PR G  +     + I N+I D IR   +   F+ ++  LL +  S  +     D  +  +
Sbjct: 44  PRAGLVNWSPIGLTIMNKISDIIRRRMDEISFEEVKLSLLSHHSS-WRKTGRWDN-SSEL 101

Query: 71  FSLQDDDGQWISLRYDLTA--PLARYVAENFDTIVFPCRTYRI-GPVFRNEKHGPGRF-- 125
           F L+   G+   L    TA   +  YV+ N  +       Y    P FRNEK   G    
Sbjct: 102 FKLK---GEEYILSP--TAEEDIVNYVSNNSSSYKNLPLLYYQINPKFRNEKRPRGGLLR 156

Query: 126 -RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
            ++F+  D  +  +S + A      ++    +  G  +  Y     +   + G L     
Sbjct: 157 GKEFMMKDAYSFDASEKDAMTTYQSVIGAYTKIFGDLKLPYTKAEADSGDIGGSLSHEWH 216

Query: 185 HGDDKLNERLIVLRAI------DKLDKFGLQGV-----------------KLLLGEGRTD 221
           + DD   + +            +K   +  Q V                 +  L      
Sbjct: 217 YIDDTGEDIIYTCDGCGSVSNVEKTLSYPEQEVDESQSIEVAVRYFTTVDRSTLVCAYYP 276

Query: 222 NS--------GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
           +S         +     +L  +  + ++   S +       +  ++   +     F +  
Sbjct: 277 SSRTLEPKFVKNEIPDLDLDFDDQETILKEFSNEDTLISKSIVRIMDARLHSRANFPDFP 336

Query: 274 VISELVRKSGYNSNRIKIS------STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
           +           ++   IS               ++    E    F + ++  KP+    
Sbjct: 337 ISFINRSLITTFTDIPIISAIEGELCGKCEEGHLHSNKAIEVGHTFYLGDKYSKPLDCSM 396

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
                    +  R         G S  I+ +    +  +            +       S
Sbjct: 397 DFPVNEKGQVERRNLIMGCYGIGVSRIIASIGEINRDDKGLNWPQSIAPWTMTIIEGAKS 456

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG----ER--- 440
           +S   Y+ +   L    +   +   +    G ++  ++    PLA+I G      E    
Sbjct: 457 ESGESYESFYNTLNDNSVDYRLDNRAKIGLGKKINQSNLLGIPLAVILGKQYPIIEIEVR 516

Query: 441 -----SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                    L  K L    + S E +  +     +  +  +     ++ V+ +L++
Sbjct: 517 GKRYVEEDQLSWKKLHDSTDYSFEWR-VDFDESGKDVKHFVHRDGFIAVVQALLKD 571


>gi|149057085|gb|EDM08408.1| threonyl-tRNA synthetase-like 2, isoform CRA_a [Rattus norvegicus]
          Length = 790

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 42/148 (28%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +       + 
Sbjct: 641 TYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMIIPVGPACENY 700

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               ++     G  A++ L  S     +++ A        ++ G  E+    + ++    
Sbjct: 701 ALQVSKECFEEGFMADVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKLNNSVNVRTRDN 760

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  I +     +      T+   E
Sbjct: 761 KIHGEISITSVIEKLKNLKKSRTLNAEE 788



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + Y+  L +        +  +F+  D +
Sbjct: 412 FLPRGAFIYNTLMDFIREEYHKRNFTEVLSPNM-YNSKLWETSGHWQHYSNNMFTF-DIE 469

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 470 KDTFALKPMNCPGHCLMFAHR 490


>gi|126466059|ref|YP_001041168.1| prolyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014882|gb|ABN70260.1| prolyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 493

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 79/250 (31%), Gaps = 31/250 (12%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           + E+   ++   A          I+E +       + + +   IV+   + T    E   
Sbjct: 169 VREIMSFIEAHTAHATSEEAEKQINEALSIYKKFFDSLLLPYFIVKTPPWDTFAGAEYNY 228

Query: 312 GFPVMNEKQKPVVFGSVGGGGR---------YDGLVSRFKGQNVPATGFSIGISRLIVAL 362
            F       K +  GSV   G+         +       K       G S      ++A+
Sbjct: 229 DFITAMPDGKGLELGSVINLGQKFARAFDIKFMDSDGVTKHVYQTCYGVSERTLGAVIAI 288

Query: 363 KSLESSTNNIKEMGPVLITTMDH----DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              +        + P+ +  +      + D +   +  ++ L+ AGIR  +        G
Sbjct: 289 HGDQKGLFLPPIIAPIQVVIVPIARRDEQDIIEYAKKISEKLKKAGIRTFLDDDPEHTPG 348

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +  + + +  P  I  G  E +   + I                   R     +IT+ I
Sbjct: 349 WKYYFWEMKGVPTRIEIGRRELNNNTVTI------------------ARRDGAKKITVSI 390

Query: 479 SELVSTVKKI 488
           +++V  ++ I
Sbjct: 391 NDMVDKLRSI 400


>gi|148256517|ref|YP_001241102.1| threonyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146408690|gb|ABQ37196.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Bradyrhizobium
           sp. BTAi1]
          Length = 688

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/386 (12%), Positives = 99/386 (25%), Gaps = 32/386 (8%)

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET-ADAEMCMMMADTLEAVGIKRNDYHIG 168
            +      E       +   +   +  G       +        D  E            
Sbjct: 312 YMRRRLAGEYDEVNAPQILDKSLWETSGHWNWYRENMFAAQSAGDEAEDKRWFALKPMNC 371

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             + +I    L+        +L E  +V R        GL  V+        D++  F  
Sbjct: 372 PGHVQIFKHGLKSY-RDLPLRLAEFGVVHRYEASGAMHGLMRVRG----FTQDDAHIFCT 426

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYE-LVKGTIAGEKGFNELVVISELVRKSGYNSN 287
              L  E + I    LS   +          +        G +E+   +E V  +  N  
Sbjct: 427 EDQLAEECLKINDLILSTYSDFGFEGELTVKLSTRPEKRVGTDEMWDHAERVMATVLNEI 486

Query: 288 RIKISSTIVRGLEYYTGCV---YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
           + + ++                +E +L   +  + Q            R+        G 
Sbjct: 487 KAQRNNIRTEINPGEGAFYGPKFEYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGA 546

Query: 345 NVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                         + R I  L    + +  +  + P  +      S+     +     L
Sbjct: 547 KKAPVMVHRAICGSMERFIGILIEHYAGSFPLW-LAPTQVVVTTITSEGDEYAKQVLAAL 605

Query: 401 RTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
           R AG+RAE+ L + K        +             P  ++ G  E     + ++ L +
Sbjct: 606 RRAGLRAEIDLRNEKINYKVREHSMQK---------IPALLVVGKKEAETHSVSVRRLGR 656

Query: 453 GKELSREIKNNESWREARVAQITIPI 478
             +      +  +          +  
Sbjct: 657 DGQTVMPTADAIAALVDEATPPDVQR 682


>gi|323489584|ref|ZP_08094811.1| prolyl-tRNA synthetase 1 [Planococcus donghaensis MPA1U2]
 gi|323396715|gb|EGA89534.1| prolyl-tRNA synthetase 1 [Planococcus donghaensis MPA1U2]
          Length = 567

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 42/154 (27%), Gaps = 8/154 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+  ++   IR   E      I  P L+ ++ L +           +  
Sbjct: 37  SGIYSFLPLGKRVLQKVETVIREEMEAANSVEIFMPALQQAE-LWQESGRWYSYGDELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRF 125
           L+D + +  +L     ++   L R   +++  +          +R     R        F
Sbjct: 96  LKDRNDREFALGATHEEVITSLLRDEIKSYKKLPLNLFQIQSKFRDEKRPRFGLLRGREF 155

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                        S +     M     +    +G
Sbjct: 156 LMKDAYSFHATTESLDETYDVMMQAYTNIFTRLG 189


>gi|56707928|ref|YP_169824.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670399|ref|YP_666956.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457008|ref|ZP_03665481.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370416|ref|ZP_04986421.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874733|ref|ZP_05247443.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|73919791|sp|Q5NGL8|SYT_FRATT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123063497|sp|Q14I20|SYT_FRAT1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56604420|emb|CAG45450.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320732|emb|CAL08833.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568659|gb|EDN34313.1| hypothetical protein FTBG_00181 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840732|gb|EET19168.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159111|gb|ADA78502.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 634

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/449 (12%), Positives = 114/449 (25%), Gaps = 91/449 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI  ++ D +R     YG   I TPL+       K        +K     
Sbjct: 260 GIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKSG----HASK----- 310

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                                 AEN                 ++E              V
Sbjct: 311 ---------------------YAENM-------------FATKSENRDFAIRPMNCPTCV 336

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       M    +          H  +  R                +    
Sbjct: 337 QVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVI 396

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG     + +     +  GD                       +++  
Sbjct: 397 LMVQQCFEVYKDFGFNDFAVKIALRPENRIGD-----------------------DETWD 433

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL+                 +   I R  +  T  +       
Sbjct: 434 KSEQMLKNALDANNVSYELLPGEG---AFYGPKIEFHLKDAIGRSWQCGTIQL------- 483

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D    +     +           + + ++    +     
Sbjct: 484 --------DFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLW- 534

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M   ++     +    ML   GIRA++ L  ++  G +++       P  +
Sbjct: 535 -LAPVQVAVMGISNNQDDYCKEVFIMLEKNGIRAKLDL-RNEKIGFKIREHTLLRVPYLV 592

Query: 434 IQGTGERSRGMLQIKDLAKGK---ELSRE 459
           I G  E+ + ++ I+    G+   ++S +
Sbjct: 593 ILGKNEQEQKIITIRK-HSGEDLGQMSVD 620


>gi|15604092|ref|NP_220607.1| threonyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|2501061|sp|O05947|SYT_RICPR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2073475|emb|CAA72469.1| threonyl-tRNA synthetase [Rickettsia prowazekii]
 gi|3860783|emb|CAA14684.1| THREONYL-TRNA SYNTHETASE (thrS) [Rickettsia prowazekii]
 gi|292571818|gb|ADE29733.1| Threonyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 635

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/254 (10%), Positives = 74/254 (29%), Gaps = 4/254 (1%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +T E +        +  +    ++            G +E+   +E   
Sbjct: 381 DDAHIFCAEEQITDETVRFCKLLTEVYKDFGFTDIKVKFSDRSEICAGNDEVWDKAENAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           K+         +        Y     +  +        +   +    V         ++ 
Sbjct: 441 KTAIEKAGFIYTLNPGEAAFYGPKIEF-VLTDAIGRQWQCGTLQMDFVLPERLDANYIAA 499

Query: 341 FKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +  P       +G     + +   E +      + PV +      +D         +
Sbjct: 500 SGEKKRPVMLHRAILGSLERFIGILIEEYAGKFPIWLAPVQVAIATITNDLNDYALEVQK 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L   G+R ++ +   K    +++    +  P+  + G  E++   + I+ L   ++   
Sbjct: 560 TLIDNGVRTDINISPDK-INYKIREFSNQKIPIIAVIGKQEQANKQVTIRKLGTIEQEIL 618

Query: 459 EIKNNESWREARVA 472
            I+   +  +   +
Sbjct: 619 SIEQLIAMIKKENS 632



 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +      +    +F+L
Sbjct: 261 GMVFWHDKGWSIYNTIEQYIRKKIRKNGYIEVKTPVLVDK-SLWEASGHWAKFRCDMFTL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 ET-DDKTLALKPMNCP 334


>gi|291450340|ref|ZP_06589730.1| threonyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291353289|gb|EFE80191.1| threonyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 660

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/429 (11%), Positives = 114/429 (26%), Gaps = 47/429 (10%)

Query: 69  GVFSLQDDDGQWISL-RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            +FS  D+ G  +++        + R   EN+         Y         K        
Sbjct: 269 DLFSFPDELGPGLAVFHPKG--GVVRKEMENYSRRRHEDAGYEFVNTPHISKEHLFETSG 326

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI--LEKIGLH 185
            +    + +    E       +   +      I +            L     + +    
Sbjct: 327 HLPNYSEGMFPPIEFDGQNYRLKAMNCPMHNLIFKGRGRSYRELPLRLFEFGTVYRYEKS 386

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
           G      R       D       + +   L +       D  +   L   Q ++ +S   
Sbjct: 387 GVVHGLTRSRGFTQDDSHIYCTKEQMPEEL-DSLLTFVLDLLRDYGLN--QFELELSTRD 443

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELV---RKSGYNSNRIKISSTIVRGLEYY 302
            + +K + E  E  + T A  +   +  +                 ++    I R  +  
Sbjct: 444 PESDKFIGEDAEWEEATEALRQAAEKQGLPLVPDPGGAAYYGPKISVQAKDAIGRSWQMS 503

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T    +     P     +              DG   +    +    G    I R    L
Sbjct: 504 T---IQVDFQQPKRFGLEYTAA----------DGSRQQPVMIHRALFGS---IERFFAVL 547

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
               +       + PV    +      +S  Q +    +  G+R E+   S +    +++
Sbjct: 548 LEHYAGAFP-AWLAPVQAVGIPIGDAHVSYLQEFAADAKARGLRVEVDSSSDR-MQKKIR 605

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
              +   P  II G  + + G +  +    G + +                  IP  + +
Sbjct: 606 NHQKAKVPFMIIVGDEDMNAGTVSFRY-RDGSQENG-----------------IPREDAL 647

Query: 483 STVKKILQE 491
           + ++ +++ 
Sbjct: 648 AKLQDVVER 656


>gi|254674303|emb|CBA10087.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 637

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|171686512|ref|XP_001908197.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943217|emb|CAP68870.1| unnamed protein product [Podospora anserina S mat+]
          Length = 734

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              VLI  +  + D   + +  +Q LR+AG+ + +   SS + G +    D    P  + 
Sbjct: 612 PTKVLIVPLSSNKDFTPEVRKLSQKLRSAGVSSRID-DSSASIGKRYSRNDELGTPFGVT 670

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIK 461
                   G + +++    +++  E  
Sbjct: 671 VDFQTLKDGTVTLRERDSTRQVRAEED 697


>gi|292655033|ref|YP_003534930.1| prolyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371489|gb|ADE03716.1| prolyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 488

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 59/219 (26%), Gaps = 8/219 (3%)

Query: 264 AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPV 323
           A ++    L     L                  +     T    EA++      +     
Sbjct: 177 AWDETMTRLSQYQSLYEDVLAIPVLRGAKPEHDKFPGADTTTTVEALMPDGKSVQAGTSH 236

Query: 324 VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPV 378
             G+           +  + +    T       R + AL                    V
Sbjct: 237 YLGTSFAEAFDLTYTTEDEDEEPAHTTSWGLSWRSLGALIMTHSDDQGLVLPPTIAPEQV 296

Query: 379 LITTM---DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
           +I  +   D     L   +   + L  AG+R E+     +N G +    + +  P+    
Sbjct: 297 VIVPIWQADTQEKVLDYAKDIAEDLEDAGVRVELDARDERNPGFKFNEWELKGVPVRFEI 356

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           G  E    ++       G  +  + +N     +A+  ++
Sbjct: 357 GPNEVDDDVVTAVHRPDGDSVELDRENIAEAVQAQFDEV 395


>gi|261392911|emb|CAX50492.1| threonyl-tRNA synthetase (threonine--tRNA ligase; ThrRS) [Neisseria
           meningitidis 8013]
 gi|325203807|gb|ADY99260.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 637

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|299139552|ref|ZP_07032726.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298598480|gb|EFI54644.1| prolyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 614

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 45/130 (34%), Gaps = 20/130 (15%)

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
              +    I     V+  T   ++D L+  +     L  AG+   +     +  G + K 
Sbjct: 504 EQYALPAAIAPFAVVVTITNVREADLLAAGEKIAADLEAAGVDVLLDDRDERA-GVKFKD 562

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           A+    P  I  G    + G +++ D     + + ++                P+  + +
Sbjct: 563 AELIGVPYRINIGKK-LAEGQVELVDRLT--QTTTDL----------------PLDAITA 603

Query: 484 TVKKILQENK 493
            ++ +L  +K
Sbjct: 604 HIQSLLAASK 613



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 34/113 (30%), Gaps = 8/113 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R  N+I+  +R      G      P L   + L +         + +F L
Sbjct: 39  GIYSYLPLGQRSLNKIIAIVREEMNKIG-QEFLLPALNPRE-LWEESGRWTGMGQNLFHL 96

Query: 74  QDDDGQWISL---RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
           QD  G  + L     ++   +AR       +     + +        ++  P 
Sbjct: 97  QDRKGAELCLAMTHEEVMTSIAR---NELRSYKQLPQIWYQIQTKFRDEPRPK 146


>gi|295100007|emb|CBK89096.1| prolyl-tRNA synthetase, family II [Eubacterium cylindroides T2-87]
          Length = 564

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 61/543 (11%), Positives = 141/543 (25%), Gaps = 87/543 (16%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK+        G         ++  +I + +R   +      +  P L   +   K  
Sbjct: 31  MIKKSS------NGMYMIMPMGKKVLAKIENIVREEMDAKDAQELLMPALIPEEVYIKS- 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
              +     +F++ D   +   L     +L    A   + +  +                
Sbjct: 84  GRREVFGSNMFTMNDRYMKRYVLGPTHEEL---FAVAASMDGKSYKDFPYNLYQIQTKFR 140

Query: 118 EKHGPGR-------FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
           ++  P         F        D   +  + A A+M        + + ++         
Sbjct: 141 DETRPRYGLIRVREFIMKDAYTFDIDEAGLDEAYAKMYDAYCRIFDRMELEYKIVKADTG 200

Query: 171 NRKIL--------DGILEKIGLHGD-DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
               L         GI E I +  +    +  L +   +D L     + +++ L E    
Sbjct: 201 AMGGLLSEEYQAISGIGEDIVVGCEGCDFSSNLEITEVVDTLQDSQEEELEIQLVETPNA 260

Query: 222 NSGDFTKGANLTSEQIDIMVSFL----------SIDLEKSMHELY--ELVKGTIAGEKGF 269
            + +    A    E  D + + L           I  ++ ++E    +L+K        F
Sbjct: 261 KTIEEV-AAFFGKEPKDFVKTLLYNVDGKIVAFCIPGDRELNETKALKLLKANEMELASF 319

Query: 270 NE----------------LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
            +                L     + R   +  N I  ++             +   L  
Sbjct: 320 EDVEKITHARVGFAGPVGLDCPVYMDRMIKHMKNFIIGANKSNHHYVNVNLSDFTPELVA 379

Query: 314 PVMNEKQKPVVFGS-----------------------VGGGGRYDGLVSRFKGQNVPATG 350
            +   K+  +                                 Y    ++ +   + + G
Sbjct: 380 DLCQVKEGDICPVCGKPLTFQHGIEVGNLFKLGTKYAQSMNLYYTDANNQLQPVWMGSYG 439

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML----RTAGIR 406
             +      +  +  +       +     I ++   S    K       L          
Sbjct: 440 IGLERCMAAIVEQHHDDKGIIWPKEVAPFILSIVPISLKDEKQMEIANDLYNYCTKNKYS 499

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +   + +  G + K  +    P  I  G      G+L+  +   G++    I + +S 
Sbjct: 500 VLLDDRNER-PGVKFKDMELIGIPYRITVGRK-AQEGILEFSNRYTGEKEEVSIDSIKSM 557

Query: 467 REA 469
            + 
Sbjct: 558 IDE 560


>gi|242768112|ref|XP_002341505.1| prolyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218724701|gb|EED24118.1| prolyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 641

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 68/221 (30%), Gaps = 23/221 (10%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L  + +  +    +   + + + +  G  +Y G  Y  +L   V  +        S    
Sbjct: 442 LTRVLDGDKCHKCSEGSLHMHNAVELGHTFYLGTRYSEVLKAKVFVDNSVIKSNESSTNS 501

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
            +   +        +  +     ++     ++ L                 +    +   
Sbjct: 502 NKSQNVPMEMGCHGIGVSRMISAVADARSDIRGLN-----WPRAIAPFEIIVVPARNLEP 556

Query: 392 KYQMYTQMLRTAGIRAEMFLGSS-KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
           + +    +LR     +++ L    K  G +LK AD    P+ I+ G   +S   +++   
Sbjct: 557 EAENIYDLLRQHTDTSDIILDDRTKQVGWKLKDADLIGYPIVIVLGKAWKSEHKVEV--- 613

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                           R+    +  +P+  LV  V+ +L  
Sbjct: 614 --------------HCRQLDGLREDVPLGNLVEYVRSLLAR 640


>gi|218767842|ref|YP_002342354.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|22654142|sp|Q9JVA3|SYT_NEIMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|121051850|emb|CAM08156.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 637

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|325197939|gb|ADY93395.1| threonyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 637

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|304387978|ref|ZP_07370150.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337977|gb|EFM04115.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 643

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 541 WLAPVQLVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 600 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 643



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 267 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 324

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 325 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 376


>gi|146339967|ref|YP_001205015.1| threonyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146192773|emb|CAL76778.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS)
           [Bradyrhizobium sp. ORS278]
          Length = 688

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/362 (13%), Positives = 95/362 (26%), Gaps = 32/362 (8%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD--DKLNE 192
              S       E         +    KR      +N    +      +  + D   +L E
Sbjct: 335 WETSGHWNWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPMRLAE 394

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             +V R        GL  V+        D++  F     L  E + I    LS   +   
Sbjct: 395 FGVVHRYEASGAMHGLMRVRG----FTQDDAHVFCTEDQLAEECLKINDLILSTYSDFGF 450

Query: 253 HELYE-LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV---YE 308
                  +        G +E+   +E V  +  N  + + +                 +E
Sbjct: 451 EGELTVKLSTRPEKRVGTDEMWDHAERVMATVLNEIKAQNNHIRTEINPGEGAFYGPKFE 510

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKS 364
            +L   +  + Q            R+        G               + R I  L  
Sbjct: 511 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFIGILIE 570

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--------N 416
             + +  +  + P  +      S+     +     LR AG+RAE+ L + K        +
Sbjct: 571 HYAGSFPLW-LAPTQVVVTTITSEGDEYAKQVLAALRRAGLRAEIDLRNEKINYKVREHS 629

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                        P  ++ G  E     + ++ L +  +      +  +          +
Sbjct: 630 LQK---------IPALLVVGKKEAETHSVSVRRLGRDGQTVMPTADAIAALVDEATPPDV 680

Query: 477 PI 478
             
Sbjct: 681 RR 682


>gi|67922129|ref|ZP_00515644.1| Prolyl-tRNA synthetase, bacterial [Crocosphaera watsonii WH 8501]
 gi|67856029|gb|EAM51273.1| Prolyl-tRNA synthetase, bacterial [Crocosphaera watsonii WH 8501]
          Length = 602

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 4/76 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ S+ L K     +   K    
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQLQPSE-LWKESGRWETYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY 85
           +FSL D   + + L  
Sbjct: 96  MFSLIDRQERELGLGP 111



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 2/103 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++I     D + +   Q     L   G+   +     +  G + K AD 
Sbjct: 494 IWPVAITPYHAIIIVPNIKDKNQMEVAQNLYNQLNKIGVETLLDDRDERA-GVKFKDADL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              P  ++ G      G +++      +    E+ N     + 
Sbjct: 553 IGIPYRVVTGRS-LKAGKVEVVTRQTKESQEIEVTNLVETLKN 594


>gi|282861434|ref|ZP_06270499.1| prolyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282564092|gb|EFB69629.1| prolyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 566

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---ESSTNNIKEMGPVLITTMDHDSDS 389
             D L  + K   V    + IG+SR + AL      +      +E+ P  +  +      
Sbjct: 425 SLDVLGQQGKPVRVTMGSYGIGVSRAVAALAEQTADDKGLCWPREVAPADVHVVAAGKAL 484

Query: 390 LSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++     ++ L  AG+R  +   +  + G +   ++    P  ++ G    + G+L++K
Sbjct: 485 QTELALDVSEKLGAAGLRVIVDDRAGVSPGVKFTDSELIGVPKILVAGRRS-AEGVLELK 543

Query: 449 DLAKGKELSREIKN 462
           D   G+     +  
Sbjct: 544 DRRTGEREELTVDE 557



 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                 ++   +   +R   +  G   +  P L   E  ++ G++    D     +F L+
Sbjct: 46  WLPLGKKVLENVSRVVREEMDAIGGQEVLLPALLPKEPYEASGRY----DEYGDLLFRLR 101

Query: 75  DDDGQWISLRY 85
           D  G    L  
Sbjct: 102 DRKGAEYLLGP 112


>gi|186476316|ref|YP_001857786.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691316|sp|B2JJJ7|SYT_BURP8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|184192775|gb|ACC70740.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 635

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 38/120 (31%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      +   +  ++   +R      G+  I+TP++    SL +        
Sbjct: 255 MQDESP-GMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMDR-SLWEASGHWQNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHGPGR 124
              +F+  + + +  +++        +    +               G   RNE  G   
Sbjct: 313 RDNMFT-TESEKRDYAIKPMNCPGHVQVF-NHGLRSYRDLPLRYAEFGSCHRNESSGALH 370



 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 38/350 (10%), Positives = 91/350 (26%), Gaps = 10/350 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +     + +        +   +    +       D +     +
Sbjct: 266 HPRGWTLWQQVEQYMRRRVNEAGYLEIKT---PMIMDRSLWEASGHWQNYRDNMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY I   N      +         D                   L G+ + +     D
Sbjct: 323 KRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSGALHGL-MRVRGFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F       SE I      +S+  +     +   +        G +E+   +E   +
Sbjct: 382 DAHIFCTEDQFISESIAFNTLAMSVYKDFGFDNVEIKLSLRPDARAGTDEIWDRAEQGLR 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLV 338
               +  +        G  Y     Y          +       +V     G        
Sbjct: 442 DALTACGVTWEELPGEGAFYGPKVEYHIKDALGRSWQCGTLQLDMVLPERLGAEFVAEDN 501

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           SR +   +           L + ++    +      + P+ +  M+         Q   Q
Sbjct: 502 SRRRPIMLHRAIVGSMERFLGILIEHHAGAMPAW--LAPMQVVVMNIAESQAEYAQSLAQ 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            L+  G+R E  L  ++    +++       P  ++ G  ER    + ++
Sbjct: 560 SLQKQGVRVEADL-RNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVR 608


>gi|326533164|dbj|BAJ93554.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 67/233 (28%), Gaps = 22/233 (9%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY---NSNRIKISSTIVRGLE 300
           LS   EK + ++    K      +  NE     ++    G        I +   + R  +
Sbjct: 494 LSTRPEKYLGDIETWNKAEQQLTEALNEFGKPWKINEADGAFYGPKIDIGVFDALKRKFQ 553

Query: 301 YYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
             T    ++  L F +    +                     +   +             
Sbjct: 554 CATLQLDFQLPLRFKLTYSAE---------------DEAKLERPVMIHRAILGSVERMFA 598

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L+               ++  +   S+SL+  +     +  AG   ++ + + +    
Sbjct: 599 ILLEHYNGKWPLWLSPRQAIVCCVS--SNSLAYAKEVHAQIHAAGFHVDIDM-TDRTIQK 655

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +++ A        ++ G  E   G + ++   K    +  I +  +     VA
Sbjct: 656 KVREAQLAQFNYILVVGAKEAESGKVVLRVRDKADLSTESIADVIARFSDEVA 708



 Score = 41.0 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N+++D +R  Y   G+  + +P + Y+  L +           +F  + + 
Sbjct: 341 FLPNGAIIYNKLMDFLRKEYRERGYREVLSPNI-YNMQLWETSGHAANYKDNMFVFEIEK 399

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 400 -QEFGLKPMNCPG 411


>gi|296102767|ref|YP_003612913.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057226|gb|ADF61964.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 642

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 94/347 (27%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDETWDRAEADLAVALEENGIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPQRLSASYVGEDNERQVPVMIHRAILGSLERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         +  TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQADYVKELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL     +S  I+  +    +R  Q 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLD-VSEVIEKLQQEIRSRSLQQ 639



 Score = 40.6 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/155 (7%), Positives = 37/155 (23%), Gaps = 3/155 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                      +     + ++   +   +  V   
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDM 407


>gi|255325106|ref|ZP_05366212.1| threonine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297671|gb|EET76982.1| threonine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 687

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 40/116 (34%), Gaps = 9/116 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    +     +     LR  GIRA++     +    +++       P  +
Sbjct: 574 WLAPHQVVGIPVADEFSPHLEEVATQLRQKGIRADVDTSDDR-MQKKIRNHTTGKVPFML 632

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELVST 484
           + G  +     +  + L  G +     +   ++   +W   R  +   P  EL+S 
Sbjct: 633 VAGARDVEADAVSFRFL-DGTQVNGVPVKEAVELIAAWVAERNNEQ--PTEELISA 685



 Score = 40.6 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            GF         +R  + +  RN +   G+  + TP +   D   K     D    G+F
Sbjct: 285 SGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVNTPHITKGDLFKKS-GHLDFYADGMF 342


>gi|241203258|ref|YP_002974354.1| ATP phosphoribosyltransferase regulatory subunit [Rhizobium
          leguminosarum bv. trifolii WSM1325]
 gi|240857148|gb|ACS54815.1| tRNA synthetase class II (G H P and S) [Rhizobium leguminosarum
          bv. trifolii WSM1325]
          Length = 373

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 31 DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
          + +   ++    + I+TP+++ ++       ++ R  + +F  + + G  + LR + T P
Sbjct: 11 NDLIAEFDARNAERIDTPVIQPAEPFLDIAGEDLR--RRIFMTESETGASLCLRPEFTIP 68

Query: 91 LA 92
          + 
Sbjct: 69 VC 70


>gi|149057086|gb|EDM08409.1| threonyl-tRNA synthetase-like 2, isoform CRA_b [Rattus norvegicus]
          Length = 708

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 42/148 (28%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +       + 
Sbjct: 559 TYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMIIPVGPACENY 618

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               ++     G  A++ L  S     +++ A        ++ G  E+    + ++    
Sbjct: 619 ALQVSKECFEEGFMADVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKLNNSVNVRTRDN 678

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  I +     +      T+   E
Sbjct: 679 KIHGEISITSVIEKLKNLKKSRTLNAEE 706



 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + Y+  L +        +  +F+  D +
Sbjct: 330 FLPRGAFIYNTLMDFIREEYHKRNFTEVLSPNM-YNSKLWETSGHWQHYSNNMFTF-DIE 387

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 388 KDTFALKPMNCPGHCLMFAHR 408


>gi|158523204|ref|YP_001531074.1| threonyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|238686905|sp|A9A078|SYT_DESOH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|158512030|gb|ABW68997.1| threonyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 637

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF-S 72
           G        +++ N +LD  R  +   G+  ++TP++    +L +     +   + ++ S
Sbjct: 257 GMPFFHPNGMKLWNALLDYWRLEHRAAGYVEVKTPVM-LDRALWEKSGHWENYRENMYVS 315

Query: 73  LQDDDGQWISLRYDLTAP 90
           + DD+    +++      
Sbjct: 316 VIDDN--QYAIKPMNCPG 331



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +  + D +   +   Q    AGIR E+    S++   +++ A     PL I  G  E+
Sbjct: 537 VLLPLNDDMIPYAREVRQEFEQAGIRTEID-DRSESLNKKVRQAQIDKIPLIITLGGKEK 595

Query: 441 SRGMLQIKDLA 451
               L ++ L 
Sbjct: 596 EARTLSVRTLD 606


>gi|91201672|emb|CAJ74732.1| strongly similar to threonyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 640

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 78/262 (29%), Gaps = 12/262 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     L  E ++++     +      +E    +     GEK   E  +  + V 
Sbjct: 382 DDAHIFCTPDQLEQEILEVIKLAQFMLSSFGFNEYEIELSVRGKGEK---EKYIGRDDVW 438

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY--DGLV 338
               ++ +I +  T +          +        + +       G          +   
Sbjct: 439 DHAEDALKIALEKTGLHYTRMEGEAKFYGPAIDIKVKDAIGRGWQGPTIQVDFNLPERFD 498

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT------TMDHDSDSLSK 392
             + G +       +    ++ A++               L         +      +  
Sbjct: 499 VNYVGSDGYHHRVVMIHRTVMGAMERFIGCLIEHFAGDFPLWIAPIQMRILSITDAQIDY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L     R E  +G++K  G +++    +  P  +I G  E   G++ ++    
Sbjct: 559 AKKLQTELLLKNFRVECDIGNNK-IGYKIREGTLQKIPYLLIVGNKEMEEGLVAVRSRKN 617

Query: 453 GKELSREIKNNESWREARVAQI 474
           G E +  +++  S  E  V   
Sbjct: 618 GDEGALPVRDFISKVEEEVRGK 639



 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K  R+R+ I D  R  +   G++ + +P +   + L K     D   + ++S 
Sbjct: 261 GLAFWHPKGARMRSIIEDFWRQEHFRRGYEILYSPHIAKIN-LWKTSGHWDFYRESMYSP 319

Query: 74  QDDDGQWISLRYDLTA 89
            D DG    L+     
Sbjct: 320 IDVDGHEYILKPMNCP 335


>gi|302381720|ref|YP_003817543.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192348|gb|ADK99919.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 639

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 1/80 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   +   I   +R   +  G+  ++TP +       +     ++    +F 
Sbjct: 261 RGMVFWHPKGWILWQVIEAYMRRRLDAAGYVEVKTPQV-LDRKFWEASGHWEKYRPNMFV 319

Query: 73  LQDDDGQWISLRYDLTAPLA 92
            +  +G+ +SL+        
Sbjct: 320 CETVEGETLSLKPMNCPGHV 339



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/375 (11%), Positives = 103/375 (27%), Gaps = 31/375 (8%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRF---RQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                  +++   +   +     +   +     D     +S         M + +T+E  
Sbjct: 267 HPKGWILWQVIEAYMRRRLDAAGYVEVKTPQVLDRKFWEASGHWEKYRPNMFVCETVE-- 324

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
           G   +   +       + GI ++       ++ E     R        GL  V+      
Sbjct: 325 GETLSLKPMNCPGHVQIFGIGQRSYRELPLRMAEFGACHRYEPSGALHGLMRVRG----F 380

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F +   +  E    +     +  +  M   Y  +        G +E    +E 
Sbjct: 381 TQDDAHIFCREDQIVEETRRFIELTRIVHADLGMQTAYINLATRPDVRAGSDEFWDKAEG 440

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYD 335
           +         +        G  Y     +   +AI         Q   V           
Sbjct: 441 MLGEAARLAGVDPVIAEGDGAFYAPKLDFVVKDAIGREWTCGTLQLDYVLPERLNAEYVG 500

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
               + +   +           + + +++   +          ++ T+  D+D  ++   
Sbjct: 501 EDGQKHRPVMLHRAILGSFERFIGIMIENYAGAFPLWLAPVQAVVATITSDADGYAE--E 558

Query: 396 YTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                + AG+R E  L + K        + G           P+  + G  E  +G + I
Sbjct: 559 VAAKFKAAGLRVETDLRNEKVGYKVREHSVGK---------VPVIAVVGRNEAEQGQVAI 609

Query: 448 KDLAKGKELSREIKN 462
           + L    +    ++ 
Sbjct: 610 RRLGSQAQTVVSVEE 624


>gi|125973827|ref|YP_001037737.1| glycyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004278|ref|ZP_05429260.1| glycyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417986|ref|ZP_06249006.1| glycyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|254781878|sp|A3DF15|SYG_CLOTH RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|125714052|gb|ABN52544.1| glycyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991712|gb|EEU01812.1| glycyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409388|gb|EFB39646.1| glycyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316939978|gb|ADU74012.1| glycyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 462

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/228 (7%), Positives = 57/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +            +       E + + +  ++   + +        +    +        
Sbjct: 237 EWFEYWKNFCFNWLLSLNIKKENLRMRDHSKEELSHYSNATTDIEYLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F +    +      S          +      ++ A   ++         + +E   
Sbjct: 297 RTDFDLRQHAEHSKEDLSYFDPNTNRKYIPYCIEPSLGADRVALVFLCDAYDEEEVEEGD 356

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV I  +        +     +ML       E     + + G + +  
Sbjct: 357 IRVVLRFHPAIAPVKIAVLPLSKKLGDEAYKIYEMLIKK-YNCE--YDETGSIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +       +   + ++D    +++  +I    S+ E +  
Sbjct: 414 DEIGTPYCVTFDFDSLNDRCVTVRDRDSMQQVRIKIDELLSYFEGKFD 461


>gi|308189914|ref|YP_003922845.1| glycine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624656|gb|ADN68961.1| glycine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 446

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/218 (11%), Positives = 49/218 (22%), Gaps = 26/218 (11%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K   +  E +  +    +               G +             L       Y+ 
Sbjct: 240 KKAEKFAEYLGLSKENVRIREHEKEELSHYSS-GTSDIEYLFPFGWGELLGIANRTDYDL 298

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL------K 363
                   E               Y   V+  K               ++  L      +
Sbjct: 299 NAHMKATGEN------------LEYVDPVTNEKFVPFVIEPSIGLDRLMLAILIDSYDEE 346

Query: 364 SLESST-----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            LE        +  K + P  +  +        K     + L  AG+        + + G
Sbjct: 347 KLEKDDSRVVLHLHKNLAPYQVAVLPLVKKLNDKATEVYEKLLKAGLSVT--YDETGSIG 404

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + +  D    P  +        +  + I+D    K+ 
Sbjct: 405 KRYRRQDAIGTPYCVTIDFDSLEKNTVTIRDRDSMKQK 442


>gi|239978444|ref|ZP_04700968.1| threonyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 655

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 42/118 (35%), Gaps = 19/118 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      +S  Q +    +  G+R E+   S +    +++   +   P  I
Sbjct: 553 WLAPVQAVGIPIGDAHVSYLQEFAADAKARGLRVEVDSSSDR-MQKKIRNHQKAKVPFMI 611

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           I G  + + G +  +    G + +                  IP  + ++ ++ +++ 
Sbjct: 612 IVGDEDMNAGTVSFRY-RDGSQENG-----------------IPREDALAKLQDVVER 651


>gi|148675292|gb|EDL07239.1| threonyl-tRNA synthetase-like 2, isoform CRA_b [Mus musculus]
          Length = 559

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 42/148 (28%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +       + 
Sbjct: 410 TYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPACENY 469

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               ++     G  A++ L  S     +++ A        ++ G  E+    + ++    
Sbjct: 470 ALQVSKECFEEGFMADVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKINNAVNVRTRDN 529

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  I +     +      T+   E
Sbjct: 530 KIHGEISIASVIEKLKNLKKSRTLNAEE 557



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/315 (9%), Positives = 74/315 (23%), Gaps = 12/315 (3%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + Y+  L +        +  +F+  D +
Sbjct: 181 FLPRGAFIYNALMDFIREEYHKRNFTEVLSPNM-YNSKLWETSGHWQHYSNNMFTF-DVE 238

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               +L+           A    +       +    V    +                  
Sbjct: 239 KDTFALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDD 298

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR--KILDGILEKIGLHGDDKLNER-- 193
           +       ++   +   L  +    + +            +  L +I +  + +   +  
Sbjct: 299 AHIFCMVEQIEEEIKGCLHFLQSVYSTFGFSFQLNLSTRPEHFLGEIEIWDEAERQLQNS 358

Query: 194 ------LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                    +   D         +K+    GR            L        VS    D
Sbjct: 359 LVEFGKPWKINPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDD 418

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + +     ++          +E       +  S      I +           +   +
Sbjct: 419 KNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPACENYALQVSKECF 478

Query: 308 EAILGFPVMNEKQKP 322
           E      V  +    
Sbjct: 479 EEGFMADVDLDDSCT 493


>gi|227908819|ref|NP_758514.2| probable threonyl-tRNA synthetase 2, cytoplasmic [Mus musculus]
 gi|81896660|sp|Q8BLY2|SYTC2_MOUSE RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|26334063|dbj|BAC30749.1| unnamed protein product [Mus musculus]
          Length = 790

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 42/148 (28%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +       + 
Sbjct: 641 TYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPACENY 700

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               ++     G  A++ L  S     +++ A        ++ G  E+    + ++    
Sbjct: 701 ALQVSKECFEEGFMADVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKINNAVNVRTRDN 760

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  I +     +      T+   E
Sbjct: 761 KIHGEISIASVIEKLKNLKKSRTLNAEE 788



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/315 (9%), Positives = 74/315 (23%), Gaps = 12/315 (3%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + Y+  L +        +  +F+  D +
Sbjct: 412 FLPRGAFIYNALMDFIREEYHKRNFTEVLSPNM-YNSKLWETSGHWQHYSNNMFTF-DVE 469

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               +L+           A    +       +    V    +                  
Sbjct: 470 KDTFALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDD 529

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR--KILDGILEKIGLHGDDKLNER-- 193
           +       ++   +   L  +    + +            +  L +I +  + +   +  
Sbjct: 530 AHIFCMVEQIEEEIKGCLHFLQSVYSTFGFSFQLNLSTRPEHFLGEIEIWDEAERQLQNS 589

Query: 194 ------LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                    +   D         +K+    GR            L        VS    D
Sbjct: 590 LVEFGKPWKINPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDD 649

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + +     ++          +E       +  S      I +           +   +
Sbjct: 650 KNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPACENYALQVSKECF 709

Query: 308 EAILGFPVMNEKQKP 322
           E      V  +    
Sbjct: 710 EEGFMADVDLDDSCT 724


>gi|24657723|gb|AAH39225.1| Threonyl-tRNA synthetase-like 2 [Mus musculus]
          Length = 790

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 42/148 (28%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +       + 
Sbjct: 641 TYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPACENY 700

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               ++     G  A++ L  S     +++ A        ++ G  E+    + ++    
Sbjct: 701 ALQVSKECFEEGFMADVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKINNAVNVRTRDN 760

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  I +     +      T+   E
Sbjct: 761 KIHGEISIASVIEKLKNLKKSRTLNAEE 788



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/315 (9%), Positives = 74/315 (23%), Gaps = 12/315 (3%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + Y+  L +        +  +F+  D +
Sbjct: 412 FLPRGAFIYNALMDFIREEYHKRNFTEVLSPNM-YNSKLWETSGHWQHYSNNMFTF-DVE 469

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               +L+           A    +       +    V    +                  
Sbjct: 470 KDTFALKPMNCPGHCLMFAHRPRSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDD 529

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR--KILDGILEKIGLHGDDKLNER-- 193
           +       ++   +   L  +    + +            +  L +I +  + +   +  
Sbjct: 530 AHIFCMVEQIEEEIKGCLHFLQSVYSTFGFSFQLNLSTRPEHFLGEIEIWDEAERQLQNS 589

Query: 194 ------LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                    +   D         +K+    GR            L        VS    D
Sbjct: 590 LVEFGKPWKINPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDD 649

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             + +     ++          +E       +  S      I +           +   +
Sbjct: 650 KNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPACENYALQVSKECF 709

Query: 308 EAILGFPVMNEKQKP 322
           E      V  +    
Sbjct: 710 EEGFMADVDLDDSCT 724


>gi|313246933|emb|CBY35782.1| unnamed protein product [Oikopleura dioica]
          Length = 800

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I NR+ D IR+ Y   GF  + TP +  S+ L K           +F+ + +D
Sbjct: 402 WLPRGAVIYNRLQDFIRSEYRKRGFKEVVTPNIFNSE-LWKTSGHWQHYEDDMFTFKVED 460

Query: 78  GQWISLRYDLTAP 90
            +W +++      
Sbjct: 461 DKW-AMKPMNCPG 472



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 28/102 (27%), Gaps = 2/102 (1%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                      + +  +S             V +  +      +   Q     L  AG+ 
Sbjct: 649 HRAILGSIERCVAILTESFGGKWPFWLSPRQVRVVPIG--KSQVPFAQSIANKLFDAGLE 706

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           AE     +  F  +++ A        ++ G  E   G   ++
Sbjct: 707 AEADPDCADTFNYRIRRAQLEQWNFILVVGDKELEAGTCAVR 748


>gi|307596038|ref|YP_003902355.1| glycyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551239|gb|ADN51304.1| glycyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 591

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 2/84 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    + +S  +   + L  AGIRA          G++    D    P AI      
Sbjct: 481 VLPIIKKQEYVSIGKRIFKELSLAGIRA--VYDDDGTIGSRYAKYDSIGVPFAITIDDKT 538

Query: 440 RSRGMLQIKDLAKGKELSREIKNN 463
            +   + I+D     ++   I   
Sbjct: 539 PADNTVTIRDRDTKAQVRVNISEV 562



 Score = 40.2 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 5/51 (9%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFD----PIETPLLEYSDSLGKFL 60
          GF D     + ++  I++  R ++  Y +      +ETP++          
Sbjct: 31 GFYDYGPLGVELKRNIIEKWRRVFI-YPYQDFIVEVETPIIMPKIVFEASG 80


>gi|229491972|ref|ZP_04385789.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229321104|gb|EEN86908.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 649

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 42/113 (37%), Gaps = 5/113 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +             T+ L+ AG+RAE+     +    +++    +  P  +
Sbjct: 534 WLAPVQVVGIPVAEAFADHLFDVTKKLKAAGVRAEVDFSDDR-MQKKIRNHTTQKVPFML 592

Query: 434 IQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQIT--IPISELVS 483
           + G  +   G +  +    G +++   + +        + +     P +ELV 
Sbjct: 593 LAGERDVEAGAVSFR-FRDGTQINGIPVDDAVRIITEWIGRRENASPTAELVQ 644


>gi|224095676|ref|XP_002310433.1| predicted protein [Populus trichocarpa]
 gi|222853336|gb|EEE90883.1| predicted protein [Populus trichocarpa]
          Length = 96

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 1/82 (1%)

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR-GMLQIKDL 450
           +Y      L    I+AE       +   Q +YA   +    +I      SR  +++++ +
Sbjct: 5   EYMELVSELWEENIKAEFVPQPDPSLTEQYEYASEHDIRCLVIITDAGVSRTDVVKVRHI 64

Query: 451 AKGKELSREIKNNESWREARVA 472
              KE     +    +    +A
Sbjct: 65  ELKKEKEVAREKLVRFLLDAMA 86


>gi|188025947|ref|ZP_02960307.2| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827]
 gi|188021023|gb|EDU59063.1| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827]
          Length = 653

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/348 (13%), Positives = 94/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y +   N      I  +      D      
Sbjct: 308 FMMDRVLWERTGHWENYKDAMFTTSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 367

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE  D +     +       +
Sbjct: 368 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQILSEVTDCIKMIYDVYATFGFEK 426

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +++   +E           I+       G  Y     +       
Sbjct: 427 IVVKLSTRPEKRIGTDDMWDTAEADLAQALKDQGIEFEYQPGEGAFYGPKIEFTLYDCLD 486

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 487 RAWQCG-TVQLDFFLPGRLNASYVGENNERIVPVMIHRAVLGSLERFIGILTEEYAGFFP 545

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P  +  M+         Q     L++ GIRA+  L  ++  G +++    R  P  
Sbjct: 546 TWLAPQQVVVMNITDTQADYVQELVSKLQSVGIRAKADL-RNEKIGFKIREHTLRRVPYM 604

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  E  R  ++ Q+ 
Sbjct: 605 LVCGDKEVESGKVSVRTRRGKDLGSLDVNEFTNKLLEEIRSRQLNQME 652



 Score = 39.8 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G A        I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 267 MQEEAP-GMAFWHNDGWTIFRELETFVRTKLKAYNYQEVKGP-FMMDRVLWERTGHWENY 324

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 325 KDAMFT-TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 383

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   + D ++ +
Sbjct: 384 LMRVRGFTQDDAHIFCTEDQILSEVTDCIKMI 415


>gi|156086662|ref|XP_001610740.1| threonyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154797993|gb|EDO07172.1| threonyl-tRNA synthetase, putative [Babesia bovis]
          Length = 736

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/388 (8%), Positives = 92/388 (23%), Gaps = 42/388 (10%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           ++ +V   R       ++          +  +                +           
Sbjct: 357 YNRLVDFMRENYRLRGYQEVITPNIYSCELWKTSGHYDNYKENMYMFTV------DEAEW 410

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
           G+K  +        K ++    ++ L   D        L         GL  V+      
Sbjct: 411 GMKGMNCPGHCLMFKHMNPSYRQLPLRFADFGVLHRNEL----TGSLSGLTRVRR----F 462

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-------VKGTIAGEKG--- 268
           + D++  F     +++E + ++     +    +    ++L       +       K    
Sbjct: 463 QQDDAHIFCTPEQISAEVLSMLKFIDDVYSLFNFEYNFKLSTKPAKALGDDELWNKAEAG 522

Query: 269 -FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
             + L         +  +         ++             +     +  +        
Sbjct: 523 LQDALEKCGRPWTLNPGDGAFYGPKIDVILLDSLEREHQCGTVQLDFNLPIRFNLGYRDK 582

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
                  D      +   V    F      + + ++ ++           V +  +    
Sbjct: 583 DSEDNT-DCKRGYSRPVIVHRAIFGSLERFIAIVIEHMKGKLPFWLSPTQVAVLPIS--D 639

Query: 388 DSLSKYQMYTQMLRTAGIRAEMF---LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
             L       + L   G    +       +K     L  A R N    +I G  E     
Sbjct: 640 KHLDYANKIYRKLLHLGYNCYVDSSANTMNKKIK--LNQAQRYN--YMLILGDREVETET 695

Query: 445 LQIKDLAKG-------KELSREIKNNES 465
           + ++ +          ++L  ++ +   
Sbjct: 696 VSVRAMDSQDNEVLTLEQLYAKLADEAE 723



 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
                 +I NR++D +R  Y   G+  + TP + YS  L K     D   + ++   
Sbjct: 349 WLPNGAKIYNRLVDFMRENYRLRGYQEVITPNI-YSCELWKTSGHYDNYKENMYMFT 404


>gi|313235460|emb|CBY19737.1| unnamed protein product [Oikopleura dioica]
          Length = 800

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I NR+ D IR+ Y   GF  + TP +  S+ L K           +F+ + +D
Sbjct: 402 WLPRGAVIYNRLQDFIRSEYRKRGFKEVVTPNIFNSE-LWKTSGHWQHYEDDMFTFKVED 460

Query: 78  GQWISLRYDLTAP 90
            +W +++      
Sbjct: 461 DKW-AMKPMNCPG 472



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 28/102 (27%), Gaps = 2/102 (1%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                      + +  +S             V +  +      +   Q     L  AG+ 
Sbjct: 649 HRAILGSIERCVAILTESFGGKWPFWLSPRQVRVVPIG--KSQVPFAQSIANKLFDAGLE 706

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           AE     +  F  +++ A        ++ G  E   G   ++
Sbjct: 707 AEADPDCADTFNYRIRRAQLEQWNFILVVGDKELEAGTCAVR 748


>gi|254374591|ref|ZP_04990072.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572310|gb|EDN37964.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 634

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/441 (12%), Positives = 112/441 (25%), Gaps = 88/441 (19%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI  ++ D +R     YG   I TPL+                    FSL
Sbjct: 260 GIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLI------------------ADFSL 301

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
               G             A   AEN                 ++E              V
Sbjct: 302 WQKSGH------------ASKYAENM-------------FATKSENRDFAIRPMNCPTCV 336

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +   +       +    +          H  +  R                +    
Sbjct: 337 QVYNTKLHSYRDLPIRIAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVI 396

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           L+V +  +    FG     + +     +  GD                       +++  
Sbjct: 397 LMVQQCFEVYKDFGFNDFAVKIALRPENRIGD-----------------------DETWD 433

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  +++K  +       EL+                 +   I R  +  T  +       
Sbjct: 434 KSEQMLKNALDANNVSYELLPGEG---AFYGPKIEFHLKDAIGRSWQCGTIQL------- 483

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                           G    D    +     +           + + ++    +     
Sbjct: 484 --------DFSMPQRLGATYIDKNGEKQVPVMLHRAIVGSLERFIGMLIEHYAGNLPLW- 534

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M   ++     +    ML   GIRA++ L  ++  G +++       P  +
Sbjct: 535 -LAPVQVAVMGISNNQDDYCKEVFTMLEKNGIRAKLDL-RNEKIGFKIREHTLLRVPYLV 592

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           I G  E+ + ++ I+    G+
Sbjct: 593 ILGKNEQEQKIITIRK-HSGE 612


>gi|327446413|gb|EGE93067.1| prolyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
          Length = 581

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 473 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 532 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 580



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106


>gi|327334245|gb|EGE75959.1| proline--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 581

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 473 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 532 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 580



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106


>gi|325133766|gb|EGC56422.1| threonyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325144077|gb|EGC66385.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325206438|gb|ADZ01891.1| threonyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 637

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|314923910|gb|EFS87741.1| prolyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314966030|gb|EFT10129.1| prolyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314981915|gb|EFT26008.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315090730|gb|EFT62706.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094978|gb|EFT66954.1| prolyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315104203|gb|EFT76179.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327328087|gb|EGE69856.1| proline--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 581

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 473 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 532 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 580



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    N G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVMRRIEAICREEMANIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106


>gi|313829616|gb|EFS67330.1| prolyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
          Length = 581

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 473 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 532 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 580



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106


>gi|313819523|gb|EFS57237.1| prolyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
          Length = 581

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 473 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 532 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 580



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106


>gi|313816766|gb|EFS54480.1| prolyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
          Length = 581

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 473 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 532 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 580



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106


>gi|313813363|gb|EFS51077.1| prolyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
          Length = 581

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 473 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 532 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 580



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106


>gi|313793980|gb|EFS42004.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801367|gb|EFS42618.1| prolyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313839912|gb|EFS77626.1| prolyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314963668|gb|EFT07768.1| prolyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|315079518|gb|EFT51511.1| prolyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327451998|gb|EGE98652.1| prolyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 581

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 473 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 532 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 580



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106


>gi|313763586|gb|EFS34950.1| prolyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313807954|gb|EFS46435.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313822153|gb|EFS59867.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823613|gb|EFS61327.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313825936|gb|EFS63650.1| prolyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|314914740|gb|EFS78571.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314919298|gb|EFS83129.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920792|gb|EFS84623.1| prolyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314924644|gb|EFS88475.1| prolyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314930471|gb|EFS94302.1| prolyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314954371|gb|EFS98777.1| prolyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314957443|gb|EFT01546.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314962089|gb|EFT06190.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314968504|gb|EFT12602.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314978817|gb|EFT22911.1| prolyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314986526|gb|EFT30618.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990885|gb|EFT34976.1| prolyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315081252|gb|EFT53228.1| prolyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315083450|gb|EFT55426.1| prolyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315087136|gb|EFT59112.1| prolyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089308|gb|EFT61284.1| prolyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315099214|gb|EFT71190.1| prolyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315100435|gb|EFT72411.1| prolyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315106771|gb|EFT78747.1| prolyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315109012|gb|EFT80988.1| prolyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327329728|gb|EGE71484.1| proline--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327454965|gb|EGF01620.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327457749|gb|EGF04404.1| prolyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328752168|gb|EGF65784.1| prolyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328755200|gb|EGF68816.1| prolyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328758320|gb|EGF71936.1| prolyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 581

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 473 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 532 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 580



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106


>gi|308173840|ref|YP_003920545.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606704|emb|CBI43075.1| threonyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
          Length = 642

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 9/135 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IRN +   +R+  + Y +  + TP++     L +     D   + ++  
Sbjct: 263 GMPFYLPNGQFIRNTLESFLRSKQDAYHYQEVRTPMMMN-QRLWEQSGHWDHYKENMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D Q  +L+             +        R+YR  P+   E     R       + 
Sbjct: 321 SEADQQRFALKPMNCPG-------HMLIFKERLRSYRELPIRMAEFGQVHRHEFSGALNG 373

Query: 134 DNVGSSAETADAEMC 148
                S    DA + 
Sbjct: 374 LLRVRSFCQDDAHIF 388



 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 37/384 (9%), Positives = 87/384 (22%), Gaps = 16/384 (4%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           +   N   I     ++                    Q   +  G      +         
Sbjct: 266 FYLPNGQFIRNTLESFLRSKQDAYHYQEVRTPMMMNQRLWEQSGHWDHYKENMYFSEADQ 325

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
              A+       H+          I ++      +         +         L G+ L
Sbjct: 326 QRFALKPMNCPGHML---------IFKERLRSYRELPIRMAEFGQVHRHEFSGALNGL-L 375

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
            +     D++  F     + SE    +     +          E +        G   L 
Sbjct: 376 RVRSFCQDDAHIFVTPEQIESEIASALQLIHEVYTAFGFSYDIE-LSTRPEDYMGSEHLW 434

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGG 330
             +E   +                G  Y               ++               
Sbjct: 435 DRAESALERVLKEQGYDFRFNRGDGAFYGPKIDIHIKDALNRSHQCATVQLDFQMPEKFD 494

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
               D    + +   +    F      L +  +    +           I  + + +   
Sbjct: 495 LTYIDEKNQKVRPVVIHRAVFGSLDRFLGIITEHYGGAFPLWLAPVQAKIIPVSNTA-HR 553

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +   + ++ AGIRAE+     +  G +++ A  +  P   + G  E     + ++  
Sbjct: 554 DCAEQVHRQMKKAGIRAELD-QRDEKLGYKIREAQMKKIPYIAVVGDQECRHHTVHVRQY 612

Query: 451 AKGKELSREIKNNESWREARVAQI 474
            +       + +  S       Q+
Sbjct: 613 GQENTFEESVSDFISRIINETKQV 636


>gi|289426352|ref|ZP_06428095.1| proline--tRNA ligase [Propionibacterium acnes SK187]
 gi|289153080|gb|EFD01798.1| proline--tRNA ligase [Propionibacterium acnes SK187]
          Length = 585

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 477 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 535

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 536 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 584



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 40  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 98

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 99  KDRKGVDMLLGP 110


>gi|282854645|ref|ZP_06263980.1| proline--tRNA ligase [Propionibacterium acnes J139]
 gi|282582227|gb|EFB87609.1| proline--tRNA ligase [Propionibacterium acnes J139]
          Length = 585

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 477 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 535

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 536 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 584



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    N G   +  P L  SD   K           +F L
Sbjct: 40  GVYSWLPLGLRVMRRIEAICREEMANIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 98

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 99  KDRKGVDMLLGP 110


>gi|50842977|ref|YP_056204.1| prolyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289428734|ref|ZP_06430417.1| proline--tRNA ligase [Propionibacterium acnes J165]
 gi|295131048|ref|YP_003581711.1| proline--tRNA ligase [Propionibacterium acnes SK137]
 gi|81826419|sp|Q6A7L9|SYP_PROAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50840579|gb|AAT83246.1| prolyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289158132|gb|EFD06352.1| proline--tRNA ligase [Propionibacterium acnes J165]
 gi|291375052|gb|ADD98906.1| proline--tRNA ligase [Propionibacterium acnes SK137]
 gi|332675928|gb|AEE72744.1| proline--tRNA ligase [Propionibacterium acnes 266]
          Length = 585

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      ++ L +       L  AG+   +      + G +  
Sbjct: 477 DEKGLCWPREVAPYDVQVLATGKGTEILDEATRIASELAEAGLEVLLD-DRKASPGVKFA 535

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK--ELSREIKNNESWREAR 470
            ++    P +++ G      G+++++D + G+  ++S         +E R
Sbjct: 536 DSEILGMPTSVVVG-RGLKDGLVEVRDRSTGENRQVSVAEAVCAVLKEVR 584



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R    + G   +  P L  SD   K           +F L
Sbjct: 40  GVYSWLPLGLRVMRRIEAICREEMASIGAQEVSFPALLASDPY-KETGRWVEYGDNLFRL 98

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 99  KDRKGVDMLLGP 110


>gi|237733955|ref|ZP_04564436.1| prolyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229383036|gb|EEO33127.1| prolyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 479

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 47/134 (35%), Gaps = 23/134 (17%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                       V+I  +       L K     + L+ AGIR ++   S K+ G +   A
Sbjct: 281 GLVLPPRVAPTQVMIIPIQQQKAGVLDKAYEIEKQLKEAGIRVKVD-ASDKSPGWKFSEA 339

Query: 425 DRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           + R  PL +  G  +       I  ++    ++ + +                    EL+
Sbjct: 340 EMRGVPLRLEIGPKDIENNACVIAKRNDGTKEKYALD-------------------QELI 380

Query: 483 STVKKILQENKEEI 496
           +T+K +L    +E+
Sbjct: 381 NTIKTLLDTIHDEM 394


>gi|89094703|ref|ZP_01167639.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89081049|gb|EAR60285.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 639

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/343 (11%), Positives = 94/343 (27%), Gaps = 8/343 (2%)

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
                    R R++++     V        +      ++ +     +  D+ +   N   
Sbjct: 276 IEQYMRQKLRPRKYVEVKTPQVVERTLWEKSGHWEKFSEEMFTTHSENRDFAVKPMNCPC 335

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
              +  +      D                   L G+ + +     D+   F    ++ S
Sbjct: 336 HVQVYNQGIRSYRDLPLRMAEFGSCHRNEPSGALHGI-MRVRGFVQDDGHIFCAEDSIQS 394

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E  + +     +  +    E+   +        G +E+   SE       ++  +K    
Sbjct: 395 EVSEFIDFLHEVYADFGFQEIQYKLSTRPEKRVGSDEVWDKSEKALADALDNAGLKWDLL 454

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
              G  Y     +        + +              G    +    R     +     
Sbjct: 455 PGEGAFYGPKIEFSLKDCLGRVWQCGTVQVDFSMPGRLGAQFVNEQGERETPVMIHRAIL 514

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
                 + + +++   +      + PV    M+         +   Q L   G RAE  L
Sbjct: 515 GSFERFIGILIENYAGALPTW--LAPVQAVVMNITDKQADYCEKVVQNLENKGFRAESDL 572

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             ++  G +++    +  P  ++ G  E   G + ++    G+
Sbjct: 573 -RNEKIGFKIRERTLQKVPYLLVIGDKEVEAGAVAVRT-RTGE 613



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/161 (7%), Positives = 46/161 (28%), Gaps = 4/161 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETP-LLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K   +   I   +R       +  ++TP ++E +  L +     ++ ++ +F+
Sbjct: 261 GMVFWHPKGWALYQGIEQYMRQKLRPRKYVEVKTPQVVERT--LWEKSGHWEKFSEEMFT 318

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
              ++ +  +++        +   +   +                 +             
Sbjct: 319 THSEN-RDFAVKPMNCPCHVQVYNQGIRSYRDLPLRMAEFGSCHRNEPSGALHGIMRVRG 377

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                     A+  +   +++ ++ +     D+       K
Sbjct: 378 FVQDDGHIFCAEDSIQSEVSEFIDFLHEVYADFGFQEIQYK 418


>gi|326563502|gb|EGE13765.1| threonyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326573810|gb|EGE23767.1| threonyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 639

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 85/317 (26%), Gaps = 10/317 (3%)

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
              +       + +     ++ DY I   N      +  +      D             
Sbjct: 303 WEKSGHWDNYGEMMFTTASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHR 362

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L G+ + +     D++  F   A +  E ++ +   L +  +     +   +  
Sbjct: 363 NEPSGSLHGI-MRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                 G +EL  ++E       ++  +        G  Y     +        + +   
Sbjct: 422 RPEKRVGADELWDLAEQALADALDNAGLDWELQAGEGAFYGPKIEFSLQDCIGRVWQCGT 481

Query: 322 ---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGP 377
                                R +   +           + + ++         +     
Sbjct: 482 LQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQV 541

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V++   D  +DS+         L   G RA   L  ++  G +++       P  +I G 
Sbjct: 542 VVMNITDKQADSVGD---VVSKLNAKGYRAISDL-RNEKIGFKIRERTLERIPFMLILGD 597

Query: 438 GERSRGMLQIKDLAKGK 454
            E   G + ++    G+
Sbjct: 598 KEVESGTVNVRT-RTGE 613



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R + ++ G+  I+TP +       K     D  
Sbjct: 255 MQEQAP-GMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKS-GHWDNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+    + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 GEMMFT-TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH 370


>gi|296113663|ref|YP_003627601.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921357|gb|ADG61708.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 639

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 85/317 (26%), Gaps = 10/317 (3%)

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
              +       + +     ++ DY I   N      +  +      D             
Sbjct: 303 WEKSGHWDNYGEMMFTTASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHR 362

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L G+ + +     D++  F   A +  E ++ +   L +  +     +   +  
Sbjct: 363 NEPSGSLHGI-MRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                 G +EL  ++E       ++  +        G  Y     +        + +   
Sbjct: 422 RPEKRVGADELWDLAEQALADALDNAGLDWELQAGEGAFYGPKIEFSLQDCIGRVWQCGT 481

Query: 322 ---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGP 377
                                R +   +           + + ++         +     
Sbjct: 482 LQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQV 541

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V++   D  +DS+         L   G RA   L  ++  G +++       P  +I G 
Sbjct: 542 VVMNITDKQADSVGD---VVSKLNAKGYRAISDL-RNEKIGFKIRERTLERIPFMLILGD 597

Query: 438 GERSRGMLQIKDLAKGK 454
            E   G + ++    G+
Sbjct: 598 KEVESGTVNVRT-RTGE 613



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R + ++ G+  I+TP +       K     D  
Sbjct: 255 MQEQAP-GMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKS-GHWDNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+    + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 GEMMFT-TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH 370


>gi|325672628|ref|ZP_08152324.1| threonine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325556505|gb|EGD26171.1| threonine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 683

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 43/112 (38%), Gaps = 5/112 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +              + L+ AG+RA++ +   +    +++    +  P  +
Sbjct: 570 WLAPVQVVGIPVAEAFEDHLFDVVKQLKAAGVRADVDVSDDR-MQKKIRNHTTQKVPFML 628

Query: 434 IQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQIT--IPISELV 482
           + G  +   G +  +    G +++   + +      A + +     P +ELV
Sbjct: 629 LAGERDVEAGAVSFR-FRDGTQVNGVPVADAVETIVAWIGRRENASPTAELV 679


>gi|303278011|ref|XP_003058299.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460956|gb|EEH58250.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 698

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +RN I +  ++I+   G+D + TP +   D L K     D   + ++  
Sbjct: 321 GLVFWHPKGALMRNIIENFWKDIHMARGYDLLYTPHVGKLD-LWKTSGHADFYAENMYKP 379

Query: 74  QDDDGQWISLRYDLTA 89
            D + +   L+     
Sbjct: 380 MDVEDETYQLKPMNCP 395



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 37/101 (36%), Gaps = 2/101 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +          +     ++ AG+R ++   S +     ++ A+++  P+  
Sbjct: 596 WIAPTQVRLLPVTDAVTPYVEETVARMKAAGVRVDV--TSKERLAKLVRNAEKQKVPVMC 653

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G  E   G L ++  A G      +    +  EA  A  
Sbjct: 654 VVGEQEAKDGTLAVRTYADGDVGVITVDEVIARLEAANAGK 694


>gi|167721308|ref|ZP_02404544.1| prolyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 568

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 34/102 (33%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +  +
Sbjct: 28  GIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAE-LWQESGRWEQYGPELLRI 86

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 87  KDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTK 128


>gi|164685792|ref|ZP_01945930.2| prolyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165918393|ref|ZP_02218479.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|164601306|gb|EAX33436.2| prolyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165917899|gb|EDR36503.1| prolyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 564

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 35/106 (33%), Gaps = 4/106 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  ++ D +R      G   +  P+++ + SL +     +     
Sbjct: 34  KLASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPA-SLWQESGRWEAYGAE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +  + D             ++   +AR   +++  +       +  
Sbjct: 93  LLRIMDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTK 138



 Score = 36.7 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 5/109 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSK-NFGN 419
                          + +  ++           +     L  AG   E+     K   G 
Sbjct: 458 DERGIIWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGY--EVLWDDRKERPGV 515

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                D    P  ++       RG+++ K     +  +  ++N  S   
Sbjct: 516 MFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 564


>gi|156838419|ref|XP_001642915.1| hypothetical protein Kpol_411p2 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113495|gb|EDO15057.1| hypothetical protein Kpol_411p2 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 729

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/368 (11%), Positives = 102/368 (27%), Gaps = 26/368 (7%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           N+ +S     +       + +    +++  Y +   N      + +       +      
Sbjct: 377 NMYNSKLWETSGHWANYKENMFTFEVEKETYGLKPMNCPGHCLMFKSRERSYRELPWRVA 436

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+   +   + D++  F     +  E I+ + +FL         E
Sbjct: 437 DFGVIHRNEYSGALSGLTR-VRRFQQDDAHIFCTQDQIEGE-IENIFNFLQFVYGVFGFE 494

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
               +      EK   EL   +    K      +      +  G   + G   + ++   
Sbjct: 495 FKMELSTRP--EKYVGELETWNNAEAKLQSALEKWGGDWELNPGDGAFYGPKIDIMISDA 552

Query: 315 VMNEKQKPVVFGSVGGGGRY-------DGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +    Q   +        R+       D   +    + V      +G    + A+ +   
Sbjct: 553 LKRWHQCATIQLDFQLPNRFELEFKAKDNQENENYERPVMIHRAILGSVERMTAILTEHF 612

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
           +      + P  +  +          Q     L  AG  A++ L  +     +++     
Sbjct: 613 AGKWPFWLSPRQVLVVPVGVKYQEYAQEVRDKLHAAGFYADVDLSGN-TLQKKVRTGQLL 671

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
                 I G  E +   + I++    ++  +                 I +  +V  +  
Sbjct: 672 KYNFIFIVGEDELTNKTVNIRNRDIVEQQGKNAA--------------IALDLVVEQLSS 717

Query: 488 ILQENKEE 495
           + QE + +
Sbjct: 718 LKQEKRND 725



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI + ++D +R  Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 346 WLPHGTRIYSTLVDMMRTEYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 404

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 405 -ETYGLKPMNCPG 416


>gi|152992232|ref|YP_001357953.1| prolyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166980164|sp|A6Q7Y7|SYP_SULNB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151424093|dbj|BAF71596.1| prolyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 568

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 33/102 (32%), Gaps = 12/102 (11%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIE----TPLLEYSDSLGKFLPDEDRPNK 68
            G  +      ++ +R+ + ++   +  G   +     TP      SL +     ++  K
Sbjct: 38  SGLYNFLPLGKKVLDRVRNVVKEELDKAGCQEVSLSFVTPA-----SLWEESGRYEKYGK 92

Query: 69  GVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
            +   +D       L     ++   L R   +++  +     
Sbjct: 93  ELLRFKDRKNNEFVLGPTHEEMMVNLVRQSVKSYKQLPLNLY 134



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 2/80 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
             T         LI +   D   ++  +   + L   G+         + FG ++K  + 
Sbjct: 466 IWTKESAPFDLQLIVSNIKDETQVALGEKLYEALTAKGLDVLFDDRKDR-FGAKMKDYEL 524

Query: 427 RNCPLAIIQGTGERSRGMLQ 446
              P A++ G      G+++
Sbjct: 525 LGIPYAVVIGKK-LQDGLVE 543


>gi|308388909|gb|ADO31229.1| putative threonyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325202484|gb|ADY97938.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207764|gb|ADZ03216.1| threonyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 637

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|260578838|ref|ZP_05846745.1| threonine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603136|gb|EEW16406.1| threonine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 667

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 12/128 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +     V I   D  ++ L     +   LR  GIRAE+     +    +++   
Sbjct: 547 GAFPAWLAPHQVVGIPVADEFNEYLEN---FAADLRAQGIRAEVDTSDDR-MQKKIRNHT 602

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKEL-----SREIKNNESWREARVAQITIPISE 480
               P  ++ G  +     +  + L  G ++        ++   +W   R      P SE
Sbjct: 603 TGKVPFMLLVGGRDVEANAVSFRFL-DGTQVNGVPREDALRIISNWIAERRNDQ--PSSE 659

Query: 481 LVSTVKKI 488
           L+  + ++
Sbjct: 660 LIQPLVEV 667



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            GF         +R  + +  R  +   G+  + TP +   D   K     D    G+F
Sbjct: 263 SGFPVFHPDGGIVRLEMEEHSRKRHIASGYSFVNTPHVTKGDLFQKS-GHLDFYADGMF 320


>gi|227833623|ref|YP_002835330.1| glycyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184626|ref|ZP_06044047.1| glycyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454639|gb|ACP33392.1| glycyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 459

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 31/93 (33%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +    +  +  +     LR A    E  +  +   G + +  D    P  +    
Sbjct: 366 VAVLPLSKKEELSTPARELANKLR-ANWNVEFDVSGA--IGRRYRRQDEIGTPFCVTYDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    ++   ++   E++  AR
Sbjct: 423 DTLEDNAVTVRERDSMEQERVKLDELEAYLAAR 455


>gi|295096109|emb|CBK85199.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 622

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 94/347 (27%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQVREEVNACIRMVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDETWDRAEADLAVALEENGIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPQRLSASYVGEDNERQVPVMIHRAILGSLERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         +  TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVVMNITDSQADYVKELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL     +S  I+  +    +R  Q 
Sbjct: 574 LVCGDKEVEAGKVAVRTRRGKDLGSLD-VSEVIEKLQQEIRSRSLQQ 619



 Score = 40.2 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 11/155 (7%), Positives = 37/155 (23%), Gaps = 3/155 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 352

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                      +     + ++   +   +  V   
Sbjct: 353 LMRVRGFTQDDAHIFCTEDQVREEVNACIRMVYDM 387


>gi|282882529|ref|ZP_06291150.1| threonine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297671|gb|EFA90146.1| threonine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 636

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                L+ AGIR ++    ++  G +++ A  +     +
Sbjct: 533 WLSPVQVEIIPVSEKFKPYAGEVFDQLKKAGIRVKID-ERAEKVGYKIREAQLKKVNYML 591

Query: 434 IQGTGERSRGMLQIKDLAKGKEL-SREIKNNESWREARVAQITI 476
           + G  E     L ++    G+E+   E+       +  +    I
Sbjct: 592 VIGEKETESHKLSVRK-RSGEEVKDVEVSKFIEDLKKEIESKEI 634



 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       +  RN +L   +N+ +  G+  I TP++   D   +     D   + ++  
Sbjct: 260 GFPFFHPNGMITRNNLLSWWKNVLQERGYGEILTPVILNEDLWHRS-GHWDHYKENMY-F 317

Query: 74  QDDDGQWISLRYDLTAP 90
            + D +  +++      
Sbjct: 318 TEIDEEGYAVKPMNCPG 334


>gi|225377425|ref|ZP_03754646.1| hypothetical protein ROSEINA2194_03073 [Roseburia inulinivorans DSM
           16841]
 gi|225210771|gb|EEG93125.1| hypothetical protein ROSEINA2194_03073 [Roseburia inulinivorans DSM
           16841]
          Length = 575

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 62/537 (11%), Positives = 145/537 (27%), Gaps = 88/537 (16%)

Query: 24  RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL 83
           RI  +I   IR   +      ++ P++  + SL +     D   K +    D +G  + L
Sbjct: 48  RITRKIEQIIREEMDAIDGQEVQFPVVMPA-SLWQESGRYDSIGKELLRFTDRNGAPMVL 106

Query: 84  RYDLT-----APLARYVAENFDTIVFPCRTYR--------------------IGPVFRNE 118
              +T       L R   +++    F     +                    +   +   
Sbjct: 107 G--MTHEEAAVQLVREYGQSYAKYPFMIYQIQTKFRDEARPRAGLIRVREFTMKDAYSFH 164

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY------------- 165
                  + + +C        A     E+  + +D+    G   +++             
Sbjct: 165 TSQEDLEQYYDKCHKAYERIYARAGIPEVVSVKSDSGMMGGNVSHEFMLLTPIGEDSIVI 224

Query: 166 HIGINNRKILDGI-------LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
               + R  ++          E +         E   + +  + L     + +K ++ + 
Sbjct: 225 CNECDYRANMEAAENIVENETEAMQELTKVHTPEMHTIEQVCEFLHVDAKKSMKAVVYQK 284

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
            +D+                 + ++L  D+  ++      ++    G    N   ++   
Sbjct: 285 NSDDKYILIFVRGDLEINETKLTNYLGCDVHPAVITEESGIQAGFIGPVNQNADCIVLFD 344

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGG----- 330
               G  +     +              +   E +    V+     P             
Sbjct: 345 RSLKGTTNLVCGANEVDYHYTGLNMEREFPDVEYVDLAKVVEGGICPCCGKKSLTISRGI 404

Query: 331 --------GGRYDGLVSRFK-----GQNVPATGFSIGISRLIVA------LKSLESSTNN 371
                   G +Y   ++            P  G        + A                
Sbjct: 405 EVGNIFQLGTKYTKTMNMTYVDKDGISKNPIMGCYGIGVGRMAASICEAHHDDYGPIWPM 464

Query: 372 IKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                 V I  M+ D + + +      + L+ AG+   ++   S + GN+   AD    P
Sbjct: 465 SIAPWQVHICAMNLDKEGVREVADTLYENLQNAGVEV-IYDDRSVSAGNKFSDADLLGVP 523

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           + ++         ++         E+S   K+         A+  +   +LV  +KK
Sbjct: 524 VRVVVSPRNLKESVV---------EVSTRDKSLMEKVPVENAEQYVK--DLVEKMKK 569


>gi|209526622|ref|ZP_03275147.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209492990|gb|EDZ93320.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 604

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV++  +    +     +   +  R+  IRAE      +  G  ++ A++   P+  
Sbjct: 502 WLAPVMVRLLPVSDEFFPFVESVAEKWRSLDIRAEADHSHDR-LGKMIRNAEKAKVPVMA 560

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           + G  E     L I+  A G+  +  +   +S
Sbjct: 561 VVGAKEVESNSLSIRTRALGELGTLTVAETQS 592



 Score = 37.5 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   +R  + D ++      G+ P+ TP L   +   K      +  + +F
Sbjct: 222 GLPLWTPKGTILRTTLEDFLKREQVRRGYQPVVTPHLGRVNLF-KTSGHWQKYREDLF 278


>gi|198437296|ref|XP_002125335.1| PREDICTED: similar to eukaryotic translation initiation factor 2
           alpha kinase 4 [Ciona intestinalis]
          Length = 1042

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 34/122 (27%), Gaps = 18/122 (14%)

Query: 373 KEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSK--NFGNQLKYADRRNC 429
                V +         +  +     + L  A I AE         +     + A  R  
Sbjct: 783 SHHAAVDVLVCSVGRTLMLHERLRVVRSLWEASIAAETVYDRGAMESMQEVQEKAQERGI 842

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
              +     E+  G   ++ L                   R  +  +P+ +LV  + K L
Sbjct: 843 RHLVFL--SEKESGSPLVRSLT-------------HDPLLRSTERRVPLDQLVDYLLKRL 887

Query: 490 QE 491
           +E
Sbjct: 888 KE 889


>gi|152970729|ref|YP_001335838.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|330009686|ref|ZP_08306560.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|150955578|gb|ABR77608.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|328534774|gb|EGF61330.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 622

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 91/347 (26%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDETWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPQRLSASYVGENNERQVPVMIHRAILGSLERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWIAPVQVVVMNITDSQAEYVNELTRKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL         I+  +    +R  Q 
Sbjct: 574 LVCGDKEVEAGKVAVRTRRGKDLGSMDVNEV-IEKLQQEIRSRSLQQ 619



 Score = 40.2 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 11/155 (7%), Positives = 37/155 (23%), Gaps = 3/155 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 352

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                      +     + ++   +   +  V   
Sbjct: 353 LMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDM 387


>gi|14520768|ref|NP_126243.1| glycyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|11387156|sp|Q9V176|SYG_PYRAB RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
          ligase; Short=GlyRS
 gi|5457984|emb|CAB49474.1| glyS glycyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 571

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 18/48 (37%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       I+ +I   IR  +   GF  IETP +          
Sbjct: 32 RGFYDYGPLGATIKRKIEKKIREAFIREGFFEIETPDITPEQVFIASG 79



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 28/94 (29%), Gaps = 4/94 (4%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ-LKYADRRNC 429
                  V +  +              + L+  G           + G + ++Y D    
Sbjct: 470 KDMAPIEVAVLPLVAKEPLTKIAYDLFRKLQKEGFIV--VYDEKDSIGKRYMRY-DEIGT 526

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           P  +         G + I+D    +++  ++++ 
Sbjct: 527 PYCVTIDNQTPIDGTVTIRDRDTREQIRVKLEDV 560


>gi|331703296|ref|YP_004399983.1| Threonine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801851|emb|CBW54004.1| Threonine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 639

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 47/143 (32%), Gaps = 21/143 (14%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  +   L+  +           V I  +     +L    +  Q L+   IR+ + 
Sbjct: 518 IGTYERFIATLLEQTKGVLPLWLAPKQVEIIPIS--ESNLEYANLIHQKLKKEFIRSHID 575

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           L   +    +++ A  +  P  ++ G  E     +  +                  +   
Sbjct: 576 LRDER-LSYKIRDAQTKKVPYQLVLGNKEVENNTITYR------------------QYGS 616

Query: 471 VAQITIPISELVSTVKKILQENK 493
            AQIT+PI E +  +K+ + + K
Sbjct: 617 DAQITVPIQEFIDMLKQQINDKK 639



 Score = 40.6 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 4/79 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          ++N I   +R     Y + P+ETP +   +   K     D   + +F  
Sbjct: 257 GLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIGTVELY-KTSGHWDHYGEDMFQP 315

Query: 74  QDDD---GQWISLRYDLTA 89
            +      +   LR     
Sbjct: 316 FNGGKGSDEQFILRPMNCP 334


>gi|319954103|ref|YP_004165370.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Cellulophaga
           algicola DSM 14237]
 gi|319422763|gb|ADV49872.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Cellulophaga
           algicola DSM 14237]
          Length = 646

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 35/108 (32%), Gaps = 3/108 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + + L+    +          +I  +          +   + L
Sbjct: 512 HRPVMIHRAPFGSMERFIALLLEHTGGNFPLWLIPEQAIILPVS--EKHEKYAEKVLKSL 569

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               IRA +    ++  G +++ A+    P  +I G  E +   + ++
Sbjct: 570 EKHEIRALVD-KRNETVGKKIREAEMNKLPFMLIVGENEEAEETISVR 616



 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 18/47 (38%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R R+ D ++   +  G++ + TP +   +      
Sbjct: 262 GLPLWLPKGAALRERLEDFLKKAQKKAGYEMVITPHIGQKELYVTSG 308


>gi|255654136|ref|ZP_05399545.1| prolyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449825|ref|ZP_06891592.1| proline--tRNA ligase [Clostridium difficile NAP08]
 gi|296877889|ref|ZP_06901909.1| proline--tRNA ligase [Clostridium difficile NAP07]
 gi|296261312|gb|EFH08140.1| proline--tRNA ligase [Clostridium difficile NAP08]
 gi|296431086|gb|EFH16913.1| proline--tRNA ligase [Clostridium difficile NAP07]
          Length = 571

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     +R+  +I   IR          I    L  S+ L K        
Sbjct: 31  MIKKMTSGVYNQLPMGLRVFKKIEQIIREELNKKDCQEILCAALLPSE-LWKESGRWTAM 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
            + +F L+D   +   L  
Sbjct: 90  GEEMFRLKDRTEREYCLGP 108


>gi|212219440|ref|YP_002306227.1| prolyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|212013702|gb|ACJ21082.1| prolyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 566

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 35/106 (33%), Gaps = 4/106 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  ++ D +R      G   +  P+++ + SL +     +     
Sbjct: 36  KLASGLYTWLPLGLRVLQKVADVVREEMNRAGALELLMPIVQPA-SLWQESGRWEAYGAE 94

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +  + D             ++   +AR   +++  +       +  
Sbjct: 95  LLRIMDRHQNGFCFGPTHEEVITDIARQELKSYKQLPLNFYQIQTK 140



 Score = 36.7 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 5/109 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSK-NFGN 419
                          + +  ++           +     L  AG   E+     K   G 
Sbjct: 460 DERGIIWPTPMAPFFIALVPVNMHKSYRVREACEKLYNELIDAGY--EVLWDDRKERPGV 517

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                D    P  ++       RG+++ K     +  +  ++N  S   
Sbjct: 518 MFADMDLIGIPHRLVISESGLDRGIVEYKARKSKEAENVSLENVLSVFR 566


>gi|47575750|ref|NP_001001219.1| threonyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|301626626|ref|XP_002942489.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Xenopus
           (Silurana) tropicalis]
 gi|45709710|gb|AAH67949.1| threonyl-tRNA synthetase-like 2 [Xenopus (Silurana) tropicalis]
          Length = 721

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 37/116 (31%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 572 TYVSHDGDDKKRPVIIHRAILGSVERMIAILTENFGGKWPLWLSPQQVMVVPVGPTCDEY 631

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   +    AG+  ++ L        +++ A        ++ G  E++ G + I+
Sbjct: 632 AQQVREQFHRAGLMTDVDLDPGCTLNKKIRNAQLAQYNFILVIGEKEKASGTVNIR 687



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N+++  IR  Y   GF  + TP + Y+  L +        ++ +FS + + 
Sbjct: 343 FLPKGAYIYNQLIAFIRQEYRKRGFQEVVTPNV-YNSKLWQTSGHWQHYSENMFSFEVEK 401

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 402 -EIFALKPMNCPG 413


>gi|58617074|ref|YP_196273.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311371|sp|Q5FHL5|SYP_EHRRG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58416686|emb|CAI27799.1| Prolyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 426

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 46/160 (28%), Gaps = 8/160 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G        +++   I + I+      G   +  PL++ +    +     D     
Sbjct: 34  QVASGIYAWLPLGLKVLKNIENVIKEEMNKSGILEVLMPLIQPASLWQESGRYND-YGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEKHGP 122
           +  ++D + + +       ++   L R    ++  +       +         R      
Sbjct: 93  MLRIKDRNNREMVFGPTHEEVVTDLLRTTLTSYKNLPLILYQVQWKFRDELRPRYGIMRC 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
             F        D   +SA  +   M  +       +G+  
Sbjct: 153 REFLMKDAYSFDKDFNSAIESYNLMFKVYIQIFRRLGLTP 192


>gi|256376220|ref|YP_003099880.1| threonyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255920523|gb|ACU36034.1| threonyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 682

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 9/114 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    +         + L+  G+R E+     +    +++    +  P  +
Sbjct: 572 WLAPVQVVGIPIADEHADHLFAVAKELKKHGVRVEIDASDDR-MQKKIRNHTTQKVPFML 630

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELV 482
           + G  +   G +  +    G +     + + +     W   R      P +ELV
Sbjct: 631 LAGGKDVESGAVSFR-FRDGTQINGVPVEQAVATVVGWISRRENAS--PTAELV 681


>gi|255514109|gb|EET90372.1| threonyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 560

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 49/118 (41%), Gaps = 19/118 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    ++ S  +   + ++  GIRAEM  GS      +++ A  +  P  +
Sbjct: 457 WLSPVQARVISISEENNSYAESVFEKIKLEGIRAEMD-GSDHTLEYKIRSAQMQKIPYIV 515

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           + G  ER +G + ++ +  GK+ +                  I +  L+ ++KK +  
Sbjct: 516 VIGNREREKGSISVR-MRSGKQENG-----------------IKLEPLLESIKKEISA 555



 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 2/85 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I  ++++ +R +   Y +  I TP L    +L       D     +F + DD 
Sbjct: 188 WHPNGRIIYQQLIEFMRGMERLYDYKEISTPALANI-ALWHVSGHIDYYKDNMF-IIDDG 245

Query: 78  GQWISLRYDLTAPLARYVAENFDTI 102
                L+                + 
Sbjct: 246 SSEFGLKPMNCPSTILIYKSRRWSY 270


>gi|284037110|ref|YP_003387040.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283816403|gb|ADB38241.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 647

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 46/139 (33%), Gaps = 6/139 (4%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + + +++   +           I  +              
Sbjct: 515 NQKHRPVMIHRAPFGSMERFIAILIENSGGNFPLWLSPDQ--IAILPISEKYEDYANDLF 572

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+   IR  + L   +  G +++ A+    P  +I G  E + G + ++   +G   S
Sbjct: 573 FSLQENDIRGFVDL-RDEKIGRKIRDAEVNKVPYMLIVGEKEAAEGTVSVRRKGQGDLGS 631

Query: 458 REIKNNESWREARVAQITI 476
             I +   + +    ++T+
Sbjct: 632 MPIAD---FIQTFKREVTV 647



 Score = 40.6 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 5/79 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF-- 71
           G      K   +R R+ + +R      G+ P+ TP +             ++  +  F  
Sbjct: 268 GLPLWLPKGTVLRERLENFLRKAQVRAGYSPVVTPHIGSKQLYVTS-GHWEKYGEDSFQP 326

Query: 72  -SLQDDDGQWISLRYDLTA 89
               D + +++ L+     
Sbjct: 327 IRTPDPNEEFL-LKPMNCP 344


>gi|224418804|ref|ZP_03656810.1| ATP phosphoribosyltransferase regulatory subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313142322|ref|ZP_07804515.1| ATP phosphoribosyltransferase [Helicobacter canadensis MIT 98-5491]
 gi|313131353|gb|EFR48970.1| ATP phosphoribosyltransferase [Helicobacter canadensis MIT 98-5491]
          Length = 209

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 6/113 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+P+       K  +I+    + +  I     ++ I TP   Y     +     D  
Sbjct: 3   LSHEIPQDSKLYFGKSAKIKRDFENLVSEILYQNDYEEILTPTFSYLQ-YQR-----DMQ 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           ++    + +     I+LR D T    R +A +        + + I P+F    
Sbjct: 57  SREFVRISNPFNHQITLRSDSTIDTIRLLAPHLKENNTKKKWFYIQPIFTYPT 109


>gi|57239072|ref|YP_180208.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579015|ref|YP_197227.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819260|sp|Q5HBI6|SYP_EHRRW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57161151|emb|CAH58064.1| prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417641|emb|CAI26845.1| Prolyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 426

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 46/160 (28%), Gaps = 8/160 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G        +++   I + I+      G   +  PL++ +    +     D     
Sbjct: 34  QVASGIYAWLPLGLKVLKNIENVIKEEMNKSGILEVLMPLIQPASLWQESGRYND-YGSE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEKHGP 122
           +  ++D + + +       ++   L R    ++  +       +         R      
Sbjct: 93  MLRIKDRNNREMVFGPTHEEVVTDLLRTTLTSYKNLPLILYQVQWKFRDELRPRYGIMRC 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
             F        D   +SA  +   M  +       +G+  
Sbjct: 153 REFLMKDAYSFDKDFNSAIESYNLMFKVYIQIFRRLGLTP 192


>gi|327311816|ref|YP_004338713.1| glycyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326948295|gb|AEA13401.1| glycyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 588

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 2/82 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +    D ++      + L  AGI A          G++    D    P+A+     
Sbjct: 478 CILPIVKRRDYVAIGVDLARRLWRAGITA--LYDDEGTIGSRYAECDEIGTPIAVTIDEM 535

Query: 439 ERSRGMLQIKDLAKGKELSREI 460
                 + I+D    +++  +I
Sbjct: 536 TPKDNTVTIRDRDSRRQIRIDI 557



 Score = 37.9 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 16/51 (31%), Gaps = 5/51 (9%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFD----PIETPLLEYSDSLGKFL 60
          GF D        R  I++  R  +    +      IETP++          
Sbjct: 29 GFYDYGPLGTLTRRNIVEKWRRTFILP-YQDIMIEIETPVIMPEAVFEASG 78


>gi|294670480|ref|ZP_06735360.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307759|gb|EFE49002.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 637

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 39/106 (36%), Gaps = 8/106 (7%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I+ G  
Sbjct: 540 QMVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQIVVGDK 598

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 599 EKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIA-DALVNH 637


>gi|255714212|ref|XP_002553388.1| KLTH0D15620p [Lachancea thermotolerans]
 gi|238934768|emb|CAR22950.1| KLTH0D15620p [Lachancea thermotolerans]
          Length = 453

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/452 (10%), Positives = 106/452 (23%), Gaps = 82/452 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIR-NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G         +I N++++ ++      +GF  + TPL+ Y  SL +     +   + +F 
Sbjct: 52  GSVFFLPNGTKIFNKLVNFMKLQQQNKFGFQEVITPLI-YRKSLWEQSGHWENYKEDMFR 110

Query: 73  LQDDD--GQWISLRYDLTAP-------LARYVAENFDTIVFPCRTYRIGPVFRNEKHGP- 122
           ++  D   +   L+              AR   E       P R     P+ RNE  G  
Sbjct: 111 VEGQDLQKEEYGLKPMNCPGHCMVFKRFARSYNE------LPLRYSDFSPLHRNEASGAL 164

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
               +  +   D+          E  +     +  +   +       N     +  L   
Sbjct: 165 SGLTRVRKFHQDDGHIFCIPEQVESEITKCIKMLDLCYTKVFPLGRGNTPTDYELRLSTR 224

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
             H                  D       + +L      +   ++  A   +     +  
Sbjct: 225 PEHY---------------VGDVSVWNHAEAILEGILNKSGKVWSINAGDGAFYGPKIDV 269

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L+    K        +               + E       + +       ++    + 
Sbjct: 270 LLADHNNKQHQVATIQLD------------FQLPERFDLKYKDKDNTFKRPIMIHRAVFG 317

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +   + A+L      +               +                  +  +  +   
Sbjct: 318 SVERFMAMLIDSNEGK------------WPFWLNPHQCMIVPLNTKNEALVHKANDLARA 365

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
              E +  +           +D D  +                                K
Sbjct: 366 LRGEDTPADEPVKLNSFHFNVDIDDRAEPTGYRI-------------------------K 400

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A  +N    I+ GT E   G   I+      
Sbjct: 401 EAIEKNYSFLIMVGTKEIESGKYAIRTRESRD 432


>gi|325136057|gb|EGC58667.1| threonyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 643

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 541 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 600 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 643



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 267 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 324

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 325 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 376


>gi|227327045|ref|ZP_03831069.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 642

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/349 (12%), Positives = 95/349 (27%), Gaps = 10/349 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVMWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N I+ +     G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAAALTENNIEFAYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    ++            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQAVIINITDSQSDYVNELTRKLQEAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQITI 476
           ++ G  E   G + +     KDL          K  +  R   + Q+ +
Sbjct: 594 LVCGDKEVETGKVAVRTRRGKDLGSMDVSEVISKLQQEIRSRSLHQLEV 642



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/205 (6%), Positives = 52/205 (25%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   ++Y +  ++ P       + +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKSYQYQEVKGP-FMMDRVMWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L     +  
Sbjct: 425 EKRIGSDEMWDRAEADLAAALTENN 449


>gi|325527705|gb|EGD04994.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 406

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 18 CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
             + + +   + D IR      GF  + TP +  + SL +     ++  +G+FSLQ  D
Sbjct: 28 WHPRGMVLLRVVEDYIRARMRQAGFSEVRTPQI-IARSLWEQSGHWEKFGRGMFSLQ-SD 85

Query: 78 GQWISLRY 85
           +   L+ 
Sbjct: 86 DRPYCLKP 93


>gi|325954887|ref|YP_004238547.1| threonyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437505|gb|ADX67969.1| threonyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 640

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 42/133 (31%), Gaps = 3/133 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L++   +           I  +      +   +   
Sbjct: 507 NQAHRPVMIHRAPFGSMERFIAILLENTAGNLPLWLTPDVFTILPIS--EKYVEFGEKVL 564

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
            +L    I   +   + K  G +++ A+ +  P  +I G  E   G + ++   +G    
Sbjct: 565 NLLAEQEINGLIDNRNEKT-GKKIRDAEVKKIPYMLIVGEKEEENGTVSVRKHGEGDLGE 623

Query: 458 REIKNNESWREAR 470
            +I+    + +  
Sbjct: 624 MKIEEFIQFVKKE 636



 Score = 37.9 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 17/47 (36%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R ++ + +    +  G++ + TP +   +      
Sbjct: 260 GLPLWLPKGAALRRKLENFLLKQQQKLGYEMVITPHIGQKELYVTSG 306


>gi|325103180|ref|YP_004272834.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter
           saltans DSM 12145]
 gi|324972028|gb|ADY51012.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter
           saltans DSM 12145]
          Length = 642

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 3/135 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++    +              +          +   
Sbjct: 509 NQKHRPVMIHRAPFGSLERFVAVLIEHCAGNFPLWLTPEQ--FIVLPISEKFEEYGKKVL 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L  + IR  + L   +  G +++ A+ +  P  +I G  E   GM+ ++   +G + S
Sbjct: 567 DSLNNSDIRGLIDL-RDEKIGRKIRDAEVKKLPYMLIIGEKEMQDGMVSVRKHGEGDKGS 625

Query: 458 REIKNNESWREARVA 472
             I+  +S     + 
Sbjct: 626 MTIEEFKSLLLDEIK 640



 Score = 37.5 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 3/78 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R R++  ++   +  G+D + TP + + +         D+     F  
Sbjct: 262 GLPLWLPKGTALRERLVSFLQKAQQKAGYDQVITPHIGHKNLYITS-GHYDKYGADSFQP 320

Query: 74  QD--DDGQWISLRYDLTA 89
                +G+   L+     
Sbjct: 321 IKTPQEGEEFFLKPMNCP 338


>gi|296135845|ref|YP_003643087.1| threonyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795967|gb|ADG30757.1| threonyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 639

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G A    K   +   +   +R +Y + G+  ++ P +   D  L K     D  ++ +F 
Sbjct: 261 GLAFWHPKGWALWQAVEQYMRQVYRDSGYQEVKGPQI--LDVSLWKRSGHWDNYSENMF- 317

Query: 73  LQDDDGQWISLRYDLTAP 90
             + + +  +++      
Sbjct: 318 FTESEKRQFAVKPMNCPG 335



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M+         +   Q L   G R E+ L  ++    +++       P  +
Sbjct: 535 WLAPVQTVVMNITDAQADYARSVAQALTKQGFRVELDL-RNEKINYKIRENALSKVPYLL 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  ER  G + ++
Sbjct: 594 VVGDQERDAGTIAVR 608


>gi|288576250|ref|ZP_05978464.2| threonine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288565905|gb|EFC87465.1| threonine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 643

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 267 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 324

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 325 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 376



 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +           L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 541 WLAPVQMVIMNITENQADYCCEVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 600 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIARLQQEIA-DALVNH 643


>gi|212711437|ref|ZP_03319565.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM
           30120]
 gi|212685893|gb|EEB45421.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM
           30120]
          Length = 653

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 93/348 (26%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y +   N      I  +      D      
Sbjct: 308 FMMDRVLWERTGHWENYKDAMFTTSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 367

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 368 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQILGEVTSCIEMIYDVYSTFGFEK 426

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +++   +E    +   S  I+       G  Y     +       
Sbjct: 427 IVVKLSTRPEKRIGTDDMWDTAEADLANALKSKGIEFEYQPGEGAFYGPKIEFTLYDCLD 486

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     +  P       +G     + + + E +    
Sbjct: 487 RAWQCG-TVQLDFFLPGRLNASYVGENNERITPVMIHRAVLGSLERFIGILTEEYAGFFP 545

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P  +  M+         Q     L++ GIRA+  L  ++  G +++    R  P  
Sbjct: 546 TWLAPQQVVVMNITDSQADYVQELVSKLQSVGIRAKADL-RNEKIGFKIREHTLRRVPYM 604

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  E  R  ++ Q+ 
Sbjct: 605 LVCGEKEVESGKVSVRTRRGKDLGSLDVNEFTTKLLEEIRSRQLNQME 652



 Score = 39.8 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G A        I   +   +R   ++Y +  ++ P       L +     +  
Sbjct: 267 MQEEAP-GMAFWHNDGWTIFRELETFVRTKLKSYNYQEVKGP-FMMDRVLWERTGHWENY 324

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 325 KDAMFT-TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 383

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   +E +
Sbjct: 384 LMRVRGFTQDDAHIFCTEDQILGEVTSCIEMI 415


>gi|311273543|ref|XP_003133916.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 328

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 4/123 (3%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   Q    A    ++ L     
Sbjct: 203 ERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVQQQFHDAKFMVDIDLDPGCT 262

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK---GKE-LSREIKNNESWREARVA 472
              +++ A        ++ G  E+S G + I+       G+  +S  +   E  R++R  
Sbjct: 263 LNKKIRNAQLAQYNFILVVGEKEKSSGTVNIRTRDNKVHGERTISETVGRLEQLRQSRSK 322

Query: 473 QIT 475
           Q  
Sbjct: 323 QAE 325


>gi|284931186|gb|ADC31124.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 573

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 13/109 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF-- 71
           G          +R  I D + ++ + +GF  + TP+L   D   K     +   K +F  
Sbjct: 194 GMPIWLPNGQIVRQLIGDYVHSVQKKFGFMAVNTPILGNVDLY-KKSGHYNHYAKDMFPE 252

Query: 72  -SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +L D  G  + LR  +T P       +    +   R Y   P+  +E 
Sbjct: 253 LALLD--GDKMMLRP-MTCP------HHCLVYLNKPRNYYDLPMRLSED 292



 Score = 43.7 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 42/356 (11%), Positives = 93/356 (26%), Gaps = 17/356 (4%)

Query: 90  PLARYVA-ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            + R +  +   ++        +            +   +     D     A     +M 
Sbjct: 203 QIVRQLIGDYVHSVQKKFGFMAVNTPILGNVDLYKKSGHYNHYAKDMFPELALLDGDKMM 262

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKIL--DGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +          +  N      +    L  D +L +    G     ER+  +  +D     
Sbjct: 263 LRPMTCPHHCLVYLNKPRNYYDLPMRLSEDALLHRYEASGGLTGLERVRAMTLLDNHIFC 322

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
            L  +K  +         +     NL   +ID+ +   + D +  +       +     E
Sbjct: 323 RLDQIKTEILNAYQ-VIKEVIGTFNLKFHRIDLSLHDPN-DKQSFIDNEQMWARSENQLE 380

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
               +L    E  ++ G  +         V+        V    L F + +E++      
Sbjct: 381 DALKDL--GLEYTKQVGEAAFYGPKIDFQVKTALNKIITVSTIQLDFSLPSEEKFD--IK 436

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                  Y+  V           G      R +  L        ++       +    ++
Sbjct: 437 YKTKDNTYEQGVIIH-------LGIIGTYERFVATLLEQTKGALDLWLAPKQAVIIPVNN 489

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           S  L       + L    +R  +     +    +++       P+ II G  E   
Sbjct: 490 SVHLEGCNQLLEKLLAKDLRVTVDSRDER-LNKKIRDHQVNKIPVQIIVGDNELKN 544


>gi|91070562|gb|ABE11466.1| putative histidyl-tRNA synthetase [uncultured Prochlorococcus
           marinus clone HOT0M-7B6]
          Length = 383

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 108/326 (33%), Gaps = 40/326 (12%)

Query: 37  YENYGFDPIETPLLEYSDSL-GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYV 95
           Y+ +G++ +    +   +++ G+ + DE++    V          + LR ++T  + +  
Sbjct: 26  YKLWGYEEVSPSFINTLETIKGRGVIDENQVVGIV------SNNSLCLRPEMTTSIVKLS 79

Query: 96  AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL 155
           +        P R +  G VF  +++    F+   +          +T   E+ ++     
Sbjct: 80  STRLINKKRPIRLFTNGMVFDKKQNNKNSFKLQEKLQSGIELIGYDTKYPEIEVINI--- 136

Query: 156 EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
                              L   ++ I L  D  L   +   + +D +           +
Sbjct: 137 -------------------LFDSIDNINLKDDCNLFLLVSTTKIMDLILNKYKNNNFEEI 177

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVI 275
            +   +   D      +  +   I+   L    E     + + +K +    K  ++L  +
Sbjct: 178 KKSLVNFDQDNLSKLGIDEDDKYILKDLLFTRGEPI--AILKKLKASFGTSKTLDDLNFL 235

Query: 276 SELV-RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
            E + + S     ++++  T    L  Y G V++ I                 +  GGRY
Sbjct: 236 FETLSKISNKYGVKLQLDPTFQPHLNLYEGIVFQLI--------GDHGNNKSVIAKGGRY 287

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIV 360
           D LV  F        G    IS  I+
Sbjct: 288 DELVRSFSPNEKIFNGIGFTISVDIL 313


>gi|172039373|ref|YP_001805874.1| prolyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171700827|gb|ACB53808.1| prolyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 623

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 4/76 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ S+ L K     +   K    
Sbjct: 57  SGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQLQPSE-LWKESGRWETYTKAEGI 115

Query: 70  VFSLQDDDGQWISLRY 85
           +FSL D   + + L  
Sbjct: 116 MFSLIDRQDRELGLGP 131



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 2/110 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++I    +D + +   Q     L   G+   +     +  G + K AD 
Sbjct: 514 IWPVAIAPYQVIIIVPNINDQNQIEVAQNLYDKLNKMGVETLLDDRDERA-GVKFKDADL 572

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              P  ++ G      G +++      +    E+KN        V Q  +
Sbjct: 573 IGIPYRVVTGRS-LKSGKVEVVTRKSKESQEIEVKNLVETLHNWVEQGKV 621


>gi|284166458|ref|YP_003404737.1| prolyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016113|gb|ADB62064.1| prolyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 493

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 63/251 (25%), Gaps = 19/251 (7%)

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                      A ++ +  L    EL                  +     T    EA++ 
Sbjct: 165 EGHTAHASDEGAWDEVWTRLGQYEELYEDVLAIPVLRGKKPEHDKFPGADTTTTVEALMP 224

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLES 367
                +       G           V   + +    T       R + AL          
Sbjct: 225 DGKSVQGATSHNLGQSFAEAFDITFVDEDEEERTAYTTSWGLSWRALGALIMTHSDDQGL 284

Query: 368 STNNIKEMGPVLITTM---DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     V+I  +   D   D L   +     L  AG R E+     +N G +    
Sbjct: 285 VLPPTIAPTQVVIVPIWQEDTKEDVLEYSENIADELEDAGFRVELDDRDERNPGFKFNEH 344

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           +    PL +  G  E     + +              +NE   E R   +   + E +  
Sbjct: 345 ELNGVPLRLEIGPYEVEDEEVTM----------VHRPDNEESVEDRDEIVE-SVDEHLDE 393

Query: 485 VKKILQENKEE 495
           +   L E  EE
Sbjct: 394 IYDKLYETAEE 404


>gi|86356468|ref|YP_468360.1| ATP phosphoribosyltransferase regulatory subunit [Rhizobium etli
          CFN 42]
 gi|109892446|sp|Q2KC03|HISZ_RHIEC RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|86280570|gb|ABC89633.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
          protein [Rhizobium etli CFN 42]
          Length = 373

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 33 IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
          + + ++    + I+TP+++ ++       ++ R  + +F  + + G  + LR + T P+ 
Sbjct: 13 LLSEFDARNAERIDTPVIQPAEPFLDIAGEDLR--RRIFMTESETGASLCLRPEFTIPVC 70


>gi|325843420|ref|ZP_08167978.1| glycine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489342|gb|EGC91716.1| glycine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 457

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/233 (7%), Positives = 48/233 (20%), Gaps = 13/233 (5%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F        +  L    +     E    EL         +G +    +           
Sbjct: 235 EFWKEYCWNWLVSLGMNPEHIRQREHSPEELSHY-----SNGTSDIEYRFPFGWGELWGV 289

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                ++       M E      +       +Y              T   +  +     
Sbjct: 290 ANRTDFDLKAH---MKESGANFEYQDPTTNEKYVPYCIEPSVGADRVTLAFLVDAYAEET 346

Query: 362 LK--SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           L+             + P  +  +        +       L        +    +   G 
Sbjct: 347 LENGETREVLKFHPALAPYKVAVLPLVKKLNEQALEVFADLSKH---MMVDYDEAGTIGK 403

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + +  D    P  +I          + ++     ++    I     +  +++ 
Sbjct: 404 RYRRQDAIGTPFCVIFDYDSLEDKKVTVRHRDTMEQERVAIDELVEYITSKIQ 456


>gi|325137877|gb|EGC60452.1| threonyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 637

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|319898981|ref|YP_004159074.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402945|emb|CBI76496.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 658

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/386 (9%), Positives = 104/386 (26%), Gaps = 14/386 (3%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
            +  +                  ++          +        S       E       
Sbjct: 266 MIFWHPKGWKMFQNLISYMRRRLDDHKYAEVQAPQVLDKSLWEVSGHWRWYKENMFKTIP 325

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
             +    +       +N    +      +  + D  +      L    +        ++ 
Sbjct: 326 AADDWNNEYIYALKPMNCPGHVQIFKHGLKSYRDLPIRLAEFGLVHRYEPSGSLHGLMRA 385

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
                  D++  F     L  E + I    LS   +    E+   +        G +EL 
Sbjct: 386 R--SFTQDDAHIFCTEEQLADECLSINDLILSTYADFGFEEISLKLSTRPEKRVGSDELW 443

Query: 274 VISELVR----KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
             +E +     K+    +  ++  +I+ G   + G  +E  L   +  E Q         
Sbjct: 444 DHAENIMTSVLKTIEKKSSGRVRISILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFN 503

Query: 330 GGGRY-----DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
              R+     D    + +   +    F      L + +++             + + T+ 
Sbjct: 504 LPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFSGHMPFWLAPQQIAVATIT 563

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D++     +  T  L+  G+   +    ++    +++    +  P+ ++ G  E     
Sbjct: 564 SDAN--DYAKKITAKLKAIGLSVILD-SRNEKINYKIREHSLQKIPVILVCGKREAETNS 620

Query: 445 LQIKDLAKGKELSREIKNNESWREAR 470
           + ++ L   ++    ++         
Sbjct: 621 VNMRRLGSVEQSLLSLEEVIKQLLDE 646


>gi|223984594|ref|ZP_03634721.1| hypothetical protein HOLDEFILI_02017 [Holdemania filiformis DSM
           12042]
 gi|223963441|gb|EEF67826.1| hypothetical protein HOLDEFILI_02017 [Holdemania filiformis DSM
           12042]
          Length = 590

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +RN + +     +   G+  I+TP++   D L +           +++ 
Sbjct: 213 GFPFFLPNGMILRNVLENYWYEEHTKEGYQFIKTPIMLSKD-LWELSGHWANYQDNMYTT 271

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 272 MI-DDREFAIKPMNCPG 287



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 19/140 (13%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R I  L    +    +      ++    H    L   +    ML   G+R ++  G +
Sbjct: 469 IERFIGILIEHYAGAFPMWLAPQQVVIVPVHHERHLDYAKELEAMLLAKGVRVKVD-GRN 527

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +  G +++ A     P+ I+ G GE       ++                  R  +   +
Sbjct: 528 EKLGYRVREAQTHKIPMQIVVGDGEVENNTATVR------------------RYGKKDSV 569

Query: 475 TIPISELVSTVKKILQENKE 494
           T+   EL+ ++   ++    
Sbjct: 570 TLSKEELLESILNEIETKAR 589


>gi|31544379|ref|NP_852957.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|81572846|sp|Q7NBT5|SYT_MYCGA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|31541223|gb|AAP56525.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930421|gb|ADC30360.1| threonyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 573

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 13/109 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF-- 71
           G          +R  I D + ++ + +GF  + TP+L   D   K     +   K +F  
Sbjct: 194 GMPIWLPNGQIVRQLIGDYVHSVQKKFGFMAVNTPILGNVDLY-KKSGHYNHYAKDMFPE 252

Query: 72  -SLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            +L D  G  + LR  +T P       +    +   R Y   P+  +E 
Sbjct: 253 LALLD--GDKMMLRP-MTCP------HHCLVYLNKPRNYYDLPMRLSED 292



 Score = 44.1 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 42/356 (11%), Positives = 93/356 (26%), Gaps = 17/356 (4%)

Query: 90  PLARYVA-ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            + R +  +   ++        +            +   +     D     A     +M 
Sbjct: 203 QIVRQLIGDYVHSVQKKFGFMAVNTPILGNVDLYKKSGHYNHYAKDMFPELALLDGDKMM 262

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKIL--DGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +          +  N      +    L  D +L +    G     ER+  +  +D     
Sbjct: 263 LRPMTCPHHCLVYLNKPRNYYDLPMRLSEDALLHRYEASGGLTGLERVRAMTLLDNHIFC 322

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
            L  +K  +         +     NL   +ID+ +   + D +  +       +     E
Sbjct: 323 RLDQIKTEILNAYQ-VIKEVIGTFNLKFHRIDLSLHDPN-DKQSFIDNEQMWARSENQLE 380

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
               +L    E  ++ G  +         V+        V    L F + +E++      
Sbjct: 381 DALKDL--GLEYTKQVGEAAFYGPKIDFQVKTALNKIITVSTIQLDFSLPSEEKFD--IK 436

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                  Y+  V           G      R +  L        ++       +    ++
Sbjct: 437 YKTKDNTYEQGVIIH-------LGIIGTYERFVATLLEQTKGALDLWLAPKQAVIIPVNN 489

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           S  L       + L    +R  +     +    +++       P+ II G  E   
Sbjct: 490 SVHLEGCNQLLEKLLARDLRVTVDSRDER-LNKKIRDHQVNKIPVQIIIGDNELKN 544


>gi|332296932|ref|YP_004438854.1| Prolyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180035|gb|AEE15723.1| Prolyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 615

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 49/184 (26%), Gaps = 15/184 (8%)

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA--LK 363
              A       NE       G           +     Q VP  G         +A  ++
Sbjct: 438 CCGAEFYSKKGNELGHIFKLGYKYTKSMNVTYLDENGKQQVPTMGCYGIGVDRSLASIIE 497

Query: 364 SL----ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                             V+I  + ++             LR AGI   +   + +  G 
Sbjct: 498 EHHDGNGIVWPMSAAPYQVVIVPVKYEGTMKEIADSLYAELRQAGIEVLLDDRNER-PGV 556

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           + K  D    P+ I+ G        L+++        S    +     EA      I  +
Sbjct: 557 KFKDMDLIGIPVRIVVGEKNLPNVELKLR--------SAADSDLVPAAEAAGKAAAIVRA 608

Query: 480 ELVS 483
           EL +
Sbjct: 609 ELAA 612



 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/245 (11%), Positives = 67/245 (27%), Gaps = 10/245 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   ++ + IR   +  G   I+  ++   + L +     D    G+  +++  
Sbjct: 42  YLPFGLRSFRKVENIIREEMDAIGALEIKPSVVVPGE-LWRESGRWDTMGAGMLRIKNRV 100

Query: 78  GQWISLRY---DLTAPLARYVAENFDTIV---FPCRTYRIGPVF-RNEKHGPGRFRQFIQ 130
            Q + +     +    L R    ++  +    +   T     +  R        F     
Sbjct: 101 DQELVVSPTAEEAVTALIRDELSSYKQLPIVAYQINTKYRDEIRPRYGVMRGREFMMKDA 160

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK--ILDGILEKIGLHGDD 188
                   S +     M        + +G+                 +  + +  +  D 
Sbjct: 161 YSFHADAESLDKTYLAMEKAYKRIFKRLGLSVIPVSADSGAMGGSGSEEFMVESPIGDDT 220

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
            +        A  +        V+   G+ +   +    K      E I  M +F  +  
Sbjct: 221 LILCPKCGYAANTEKAACAPDEVQDKDGKPQVAATLPIEKVPCPGVETIAQMETFFKMPA 280

Query: 249 EKSMH 253
           E+ + 
Sbjct: 281 EQFIK 285


>gi|268686074|ref|ZP_06152936.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626358|gb|EEZ58758.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 637

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ A  RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAAKLQAADFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637


>gi|297588571|ref|ZP_06947214.1| glycine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573944|gb|EFH92665.1| glycine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 469

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/226 (4%), Positives = 48/226 (21%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +         +  +       E + + +  ++     ++       +    +        
Sbjct: 244 EWFEYWRNFCREFLLNLGMKEENLRLRDHEQEELSFYSKATTDFEYLFPFGWGELWGIAD 303

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +    +              +  +      +V      +         + LE ++
Sbjct: 304 RTDYDLSKHSEGSGEKLEYMDPSTNEKYIPYCIEPSVGVDRMFLSFLCDAYEEEQLEDNS 363

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     +    +  +        K       L             + + G + +  
Sbjct: 364 TRTVLKIHPALAAYKVAVLPLTKKLNDKAMEIYNEL-AKNF--MTHFDDAGSIGKRYRRE 420

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  +           + I+D    ++    ++    +    
Sbjct: 421 DEAGTPYCVTIDFDTLEDNTVTIRDRDTMEQKRMTVEEIIEFVNKE 466


>gi|121634517|ref|YP_974762.1| threonyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|120866223|emb|CAM09963.1| putative threonyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325131827|gb|EGC54527.1| threonyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 648

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648



 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|18977999|ref|NP_579356.1| glycyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|32171572|sp|Q8U0G2|SYG_PYRFU RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
          ligase; Short=GlyRS
 gi|18893778|gb|AAL81751.1| glycyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 568

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 18/48 (37%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       I+ +I   IR  +   GF  IETP +          
Sbjct: 30 RGFYDYGPLGATIKRKIEKKIREAFIREGFFEIETPDITPEQVFIASG 77



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 4/94 (4%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ-LKYADRRNC 429
                  V +  +       +      + L+  G           + G + ++Y D    
Sbjct: 468 KDMAPIEVAVLPLVAKEPLTTIAYEIYRNLQKEGFIV--VYDEKDSIGKRYMRY-DEIGT 524

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           P  +         G + I+D    +++  +I+  
Sbjct: 525 PYCVTVDNQTPEDGTVTIRDRDTREQIRVKIEEV 558


>gi|319956647|ref|YP_004167910.1| prolyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419051|gb|ADV46161.1| prolyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 571

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 42/124 (33%), Gaps = 6/124 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +      R  +R+   ++   +  G   ++   +  ++ L +     ++  K +   
Sbjct: 38  GLYNFLPLGKRSLDRVRQVVKEELDAAGCQEVDLAFVTPAE-LWRESGRFEKYGKELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D       L     ++   L R   +++  +      Y+I   FR+E        +  +
Sbjct: 97  TDRKENEFVLGPTHEEMMVNLVRQSVKSYKQLP--LHLYQIKTKFRDEIRPRFGLMRGRE 154

Query: 131 CDVD 134
             ++
Sbjct: 155 FLME 158



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYAD 425
             T         +I +   +       +   ++L++ G   E+ L   K  FG ++K  +
Sbjct: 469 IWTRESAPFDVEIIVSNIANDAEREAAEELYRLLKSKG--VEVLLDDRKERFGFKMKDFE 526

Query: 426 RRNCPLAIIQGTGERSRGMLQI 447
               PL I+ G    + G +++
Sbjct: 527 LIGIPLGIVVGKK-LADGQVEL 547


>gi|332796853|ref|YP_004458353.1| prolyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694588|gb|AEE94055.1| prolyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 481

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 74/256 (28%), Gaps = 28/256 (10%)

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           +  E + L       E+   E + I + +  +      +       R         ++ +
Sbjct: 159 TFKEAHTLHVSYEDAERQVKEAIEIYKKIFDTLGIPYILSERPEWDRFAGAEHTYAFDTL 218

Query: 311 LGFPV---MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +       +          +     +              + G S  +  + +A+   + 
Sbjct: 219 MPDGRALQIGTVHHLGQHFTKALDYKIQKADGSLDYPYQTSYGISDRVIAVSIAVNGDDH 278

Query: 368 STNNIKEMGPVLITTMDHDSDSLS-------KYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  + P+ +  +   + +           +   + L +AGI A +     K  G +
Sbjct: 279 GPILNPIIAPIKVVIIPIPAKTEEDNKRVENYCKEIQEKLSSAGISAVVDSDKEKTPGEK 338

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             Y + +  PL I  G  E +   + IK                  R   +    +   E
Sbjct: 339 FYYWEMKGVPLRIEIGLREVNNETITIK------------------RRDTLESKIVKKDE 380

Query: 481 LVSTVKKILQENKEEI 496
           L+ TV  +L    E++
Sbjct: 381 LIKTVNDLLSSLSEDL 396



 Score = 43.3 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +IR  +++ IR   +  G + +  PLL     L K           V
Sbjct: 32  PIKGMGVWMPYGFKIRQNVINIIRKFLDETGHEEVLFPLLIPEYLLRKESEHIKGFEGEV 91

Query: 71  FSLQDDDGQW-----ISLRY 85
           +      G+      ++LR 
Sbjct: 92  Y-WVTKGGEEDLDIRLALRP 110


>gi|332024431|gb|EGI64629.1| Putative prolyl-tRNA synthetase, mitochondrial [Acromyrmex
           echinatior]
          Length = 437

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 58/212 (27%), Gaps = 18/212 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     ++     G        +RI N+++D +     N G   I  P L  + +L K  
Sbjct: 39  MINYGIIKPLSI-GMYALLPLGMRILNKLIDIVDKEMMNIGAQKILLPALTPA-ALWKKT 96

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY-------DL------TAPLARYVAENFDTIVFPCR 107
              D     +F+L D   +   L         DL      T P+++ +      +     
Sbjct: 97  DRYDSNKTELFTLTDRHKKEYILSPTHEEAICDLISLAGPTVPISKLL---PLKLYQISS 153

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
            +R     R        F        D+   +A      +C    +    +GIK      
Sbjct: 154 KWRDEMKPRLGFLRSREFIMKDLYTFDSSLDNARHTYDLVCESYNNIFRQIGIKYTKSIG 213

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
            +     L            +    +      
Sbjct: 214 DVGTIGGLMSHEYHYVSDIGEDTILQCPSCHF 245


>gi|253826672|ref|ZP_04869557.1| Histidyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510078|gb|EES88737.1| Histidyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 283

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 6/113 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  E+P+       K  +I+    + +  I     ++ I TP   Y     +     D  
Sbjct: 3   LSHEIPQDSKLYFGKSAKIKRDFENLVSEILYQNDYEEILTPTFSYLQ-YQR-----DMQ 56

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           ++    + +     I+LR D T    R +A +        + + I P+F    
Sbjct: 57  SREFVRISNPFNHQITLRSDSTIDTIRLLAPHLKENNTKKKWFYIQPIFTYPT 109


>gi|254369559|ref|ZP_04985570.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122513|gb|EDO66648.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 634

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 42/160 (26%), Gaps = 2/160 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI  ++ D +R     YG   I TPL+       K      +  + +F+ 
Sbjct: 260 GIAFWHDNGVRIWRQVEDYMRASNNKYGCSEIRTPLIADFSLWQKS-GHASKYAENMFAT 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + ++ +  ++R        +       +            +    +              
Sbjct: 319 KSEN-RDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSF 377

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                       ++   +   ++       D+       K
Sbjct: 378 TQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDFAVK 417


>gi|154249412|ref|YP_001410237.1| threonyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153348|gb|ABS60580.1| threonyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 638

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +   ++   R +++ YG+  + TPL+ + + L +     D     ++  
Sbjct: 263 GMPIFLPYGMTVLKELMSLSRELHKKYGYKEVGTPLIMH-EKLWRQSGHWDHYKNNMY-F 320

Query: 74  QDDDGQWISLRYDLTAP 90
            + +    +++      
Sbjct: 321 TEKEEVTYAVKPMNCPG 337



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 57/226 (25%), Gaps = 23/226 (10%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLE 300
           LS   E  M +     K T        E+ V  E+               +   + R  +
Sbjct: 420 LSTMPEDHMGDEATWEKATEGLRNALEEMKVPYEVAEGEGAFYGPKIDFHVRDVLGREWQ 479

Query: 301 YYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
             T    ++    F +                  Y       +   +        I R  
Sbjct: 480 CATIQMDFQMPERFDLT-----------------YKDSDGNERRPVMIHRALYGSIERFF 522

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
             L    +       + PV    +          +   Q L    IR E+    ++    
Sbjct: 523 GILIEHYAGAFP-TWLAPVQAVVIPVSEKFSEYAKNIYQTLDENDIRVELD-DRNETLSY 580

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           +++    R  P  II G  E+    + ++          +I +   
Sbjct: 581 RIRENQMRKVPYMIIVGEKEKESETISVRTREGKDTHGIKINDFIE 626


>gi|240127689|ref|ZP_04740350.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 648

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ A  RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVIMNITENQADYCREVAAKLQAADFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VIGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648


>gi|224417829|ref|ZP_03655835.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827169|ref|ZP_04870054.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141370|ref|ZP_07803563.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510575|gb|EES89234.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130401|gb|EFR48018.1| threonyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 605

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 81/264 (30%), Gaps = 11/264 (4%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F + + + +E ++ ++ F    ++         +        G +E+   +
Sbjct: 347 EFTQDDAHIFCRPSQIATE-VENIIDFTKKIMDSFDFSYEMEISTRPEKSIGSDEVWEEA 405

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----G 331
               K+      I        G  Y      +       +  K +               
Sbjct: 406 TQALKNALEICNIPYKIDEGGGAFYGPKIDIKIT---DAIGRKWQCGTIQIDMNLPERFK 462

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
             Y    +  K   +          R I  L            + P  I  +       S
Sbjct: 463 LEYTDENNSSKQPVMIHRAILGSFERFIAILTEHFGGEFPFF-IAPTQIIIIPLGEAQES 521

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +     L    + AE+    ++    +++ A+++  P+ ++ G  E    ++ I+D  
Sbjct: 522 YAKELRNQLLNVNVYAEID-NKNETLNKRIRNAEKQRVPMIVVLGAKEEQEKIVAIRDRR 580

Query: 452 KGKELSREIKNNESWREARVAQIT 475
           + ++ +        + + ++ +++
Sbjct: 581 EKQQSTMGFDEFIKFSKEKMREVS 604



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 27/97 (27%), Gaps = 2/97 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R  I   +       G++P+  P +    ++ K         + ++  
Sbjct: 231 GLPIWLPKGARLRRNIERLLTKALIQRGYEPVRGPEI-LKSAVWKTSGHYSNYGENMY-F 288

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              DG    ++        +       +       + 
Sbjct: 289 TTIDGVEYGIKPMNCVGHIKVYQSALRSYRDLPLRFY 325


>gi|55741823|ref|NP_001006977.1| threonyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|59896667|sp|Q5XHY5|SYTC_RAT RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53734298|gb|AAH83914.1| Threonyl-tRNA synthetase [Rattus norvegicus]
          Length = 695

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 35/116 (30%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 546 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 605

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   Q    A    ++ L        +++ A        ++ G  E++ G + I+
Sbjct: 606 AQKVRQEFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 661



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 317 FLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 375

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 376 -EQFALKPMNCPG 387


>gi|312795091|ref|YP_004028013.1| Prolyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312166866|emb|CBW73869.1| Prolyl-tRNA synthetase (EC 6.1.1.15) [Burkholderia rhizoxinica HKI
           454]
          Length = 589

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/153 (9%), Positives = 45/153 (29%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++   +     ++    +  +
Sbjct: 49  GIYNYMPIGLRSIRKVEAIVREEMNRAGAVELLMPAVQPAELWQESS-RWEQYGPELLRV 107

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGPGRFR 126
           +D   +   +     ++   +AR   +++  +          +R     R        F 
Sbjct: 108 KDRHDRDFVVGPTHEEVVTDIARKEIKSYRQMPVNFYQVQTKFRDEIRPRFGVMRGREFI 167

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D   +  + +  +M          +G
Sbjct: 168 MKDAYSFDRDRAGLQLSYQKMYDAYVRIFTRLG 200


>gi|258568114|ref|XP_002584801.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237906247|gb|EEP80648.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 756

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/483 (9%), Positives = 108/483 (22%), Gaps = 74/483 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  L +     +     +F 
Sbjct: 340 GCPFLLPNGTKIFNSLQKLLRTEYRKRGYQEVQSPNM--YDVGLWRTSGHWNHYKDDMFK 397

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L  +  +  +L+                              +R        F    + +
Sbjct: 398 LAVEK-REWALKPMNCPG-------------HCIMFNHRERSYRELPLRMADFGVLHRNE 443

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I +    +    R I         L    +  +
Sbjct: 444 ASGALHGLTRVRKFQQDDTHIFCTEDQITQEIEGLFDFLRAIYGLFGFSFKLKLSTRPEK 503

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            L  L   +  +    +    L     +D   D   GA    +    +   L  + + + 
Sbjct: 504 YLGKLETWNFAEAQLKE---ALTRFKGSDWEIDEGDGAFYGPKIDITIQDALKREFQCAT 560

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L   +      E   NE                                         
Sbjct: 561 IQLDYQLPQNFKLEYMTNETGRPKA----------------------------------T 586

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL--ESSTN 370
               +E        +                  +          R    L          
Sbjct: 587 DAKKDETSPKGDDDNPSPDSDDGTPGPGRARPVMIHRAIIGSFERFFGILIEHFGGKWPF 646

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
            +     +++  M    D + + Q     LR   +  ++ +  +     +++        
Sbjct: 647 WLSPRQILIVPVMPAVYDYVEELQGI---LRGDKLNVDIDVSGN-TLQKKIRNGQLAQYN 702

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
              + G  E+    + I++                   ++     IP+ E  + +  + +
Sbjct: 703 FIFVVGAQEKETRTVNIRNRDD--------------PSSQAKGSLIPLDEARAKLHALRK 748

Query: 491 ENK 493
           E +
Sbjct: 749 ERR 751


>gi|155061091|gb|ABS90481.1| threonyl-tRNA synthetase [Streptomyces albus]
          Length = 439

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R+ + + +R      G+  + +P+L   +   +        ++ +F  
Sbjct: 57  GLPYWLPDGAAVRHALEEYVRAAERRAGYRHVYSPVLGKRELY-EISGHWSHYSEDMFPP 115

Query: 74  QDDDGQWISLRYDLTA 89
            +  G+ + LR  L  
Sbjct: 116 MEVGGEQMLLRPSLCP 131



 Score = 43.7 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  +      +   + + +     G+RAE       + G +++ A     P  +
Sbjct: 334 WLAPVQIAVLPVTGAQVPDGEAFLRRCAALGLRAEQADPGRGSLGARIRAARL--VPYQV 391

Query: 434 IQGTGERSRGMLQIKDLAKG 453
           + G  E + G + ++ L  G
Sbjct: 392 VIGEEEAADGRVALR-LRDG 410


>gi|325090828|gb|EGC44138.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 578

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 70/246 (28%), Gaps = 28/246 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N++   +R  Y  YGF  + TP + Y  SL K           ++ +
Sbjct: 109 GSPLFLPNGTHILNKLTSFLRAQYTKYGFLEVLTPSI-YKKSLWKVSGHWQNYKDDMYEV 167

Query: 74  QDDD-------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +  +              +   L+          + ++N      P R     P+ RNE 
Sbjct: 168 RGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEI 227

Query: 120 HGP----GRFRQFIQCDVDNVGSSAET--ADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
            G      R R+F Q D        +               +   G +     +     K
Sbjct: 228 SGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALKFTDTVMRTFGFENYRLVLSTRPEK 287

Query: 174 ILDGILEKIGLHGDDKLNE------RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              G +E +    + +L +      R   L   D         +++   +G+        
Sbjct: 288 DFIGSVE-LWDSAERQLRDALEKSGRSWELNHGDGAFYGPKIDMQIQDSDGKFHQLSTIQ 346

Query: 228 KGANLT 233
              NL 
Sbjct: 347 LDMNLP 352


>gi|294340009|emb|CAZ88373.1| threonine tRNA synthetase [Thiomonas sp. 3As]
          Length = 639

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G A    K   +   +   +R +Y + G+  ++ P +   D  L K     D  ++ +F 
Sbjct: 261 GLAFWHPKGWALWQAVEQYMRQVYRDSGYQEVKGPQI--LDVSLWKRSGHWDNYSENMF- 317

Query: 73  LQDDDGQWISLRYDLTAP 90
             + + +  +++      
Sbjct: 318 FTESEKRQFAVKPMNCPG 335



 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M+         +   Q L   G R E+ L  ++    +++       P  +
Sbjct: 535 WLAPVQAVVMNITDAQADYARSVAQALTKQGFRVELDL-RNEKINYKIRENALSKVPYLL 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  ER  G + ++
Sbjct: 594 VVGDQERDAGTIAVR 608


>gi|149027311|gb|EDL82978.1| threonyl-tRNA synthetase, isoform CRA_b [Rattus norvegicus]
          Length = 433

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 35/116 (30%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 284 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 343

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   Q    A    ++ L        +++ A        ++ G  E++ G + I+
Sbjct: 344 AQKVRQEFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 399



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 55  FLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 113

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 114 -EQFALKPMNCPG 125


>gi|149027310|gb|EDL82977.1| threonyl-tRNA synthetase, isoform CRA_a [Rattus norvegicus]
          Length = 722

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 35/116 (30%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 573 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 632

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   Q    A    ++ L        +++ A        ++ G  E++ G + I+
Sbjct: 633 AQKVRQEFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 688



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 344 FLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 402

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 403 -EQFALKPMNCPG 414


>gi|298711240|emb|CBJ32460.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 147

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 37/113 (32%), Gaps = 9/113 (7%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +     +           + AG+R ++  GS +    Q++ A++   P+  + G  E + 
Sbjct: 37  LPVTDVARDYCLEVQSKFKKAGLRVKVDRGSER-LAKQIRTAEKERIPVMSVVGEKEVAA 95

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           G L ++    G      I    +                   + + L+   +E
Sbjct: 96  GTLAVRSRGFGDMGDVPIDELIASMLEA--------DAAAKELHEFLEPKAKE 140


>gi|319761647|ref|YP_004125584.1| prolyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317116208|gb|ADU98696.1| prolyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 581

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 41/113 (36%), Gaps = 8/113 (7%)

Query: 7   LRAELPR----GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           +RA L +    G        +R+  ++   +R      G      P+++ ++ L +    
Sbjct: 27  MRAGLIKKLGAGIYSYMPMGLRVIRKVEAIVREEMNRAGAVECTMPVVQPAE-LWQETGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            ++    +  +QD  G+   ++    ++   +AR    ++  +       +  
Sbjct: 86  FEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQELRSYKQLPRNLYQIQTK 138



 Score = 40.2 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 3/86 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V+I  +  D   +  +  +     L  +GI   +     +  G  
Sbjct: 470 DERGIIWPDAIAPFTVVICPIGMDRSEEVRAVAEKLHGELLASGIDVILD-DRGERPGAM 528

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQ 446
               +    P  I  G      G ++
Sbjct: 529 FADWELIGVPHRITIGDKGLKEGQVE 554


>gi|291395207|ref|XP_002714160.1| PREDICTED: threonyl-tRNA synthetase-like [Oryctolagus cuniculus]
          Length = 723

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 42/123 (34%), Gaps = 4/123 (3%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   Q    A   A++ L +   
Sbjct: 598 ERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDAGCT 657

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK---GKEL-SREIKNNESWREARVA 472
              +++ A        ++ G  E++ G + I+       G+   S  I+  +  +++R  
Sbjct: 658 LNKKIRNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTISETIERLQQLKQSRSK 717

Query: 473 QIT 475
           Q  
Sbjct: 718 QAE 720



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + Y+  L          ++ +FS + + 
Sbjct: 345 FLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNI-YNSRLWMTSGHWQHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 404 -ELFALKPMNCPG 415


>gi|170575688|ref|XP_001893343.1| threonyl-tRNA synthetase, cytoplasmic [Brugia malayi]
 gi|158600735|gb|EDP37841.1| threonyl-tRNA synthetase, cytoplasmic, putative [Brugia malayi]
          Length = 685

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/155 (10%), Positives = 41/155 (26%), Gaps = 20/155 (12%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           +D    R +   +             +  ++               + T+    +   + 
Sbjct: 537 FDENNERQRPVMIHRALLGSIERMTAILAENYGGKWPFWLSPRQAKVITVHESQNDYGR- 595

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
               Q +  AG   E  + SS     Q++ A        ++ G  E   G + ++     
Sbjct: 596 -KVQQEIYEAGFEVEFDVDSSDTLNKQIRNAQIAQFNFILVVGPAEARNGTVNVR----- 649

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                              +  + + +L+   K+ 
Sbjct: 650 -------------TRDNAVRGEVKLEDLIEKFKRF 671



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 3/97 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   I N + + IR  Y   GF  + +P + Y+  L +     +  +  +F  
Sbjct: 300 GSAFWYPKGAHIYNTLCNFIRKEYRKRGFTEVISPNM-YNSKLWEQSGHWEHYSDNMFK- 357

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
            D + +   L+             +            
Sbjct: 358 IDIEKETFGLKPMNCPGHCLMY-SHMPRTHNELPLRY 393


>gi|330823518|ref|YP_004386821.1| Prolyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329308890|gb|AEB83305.1| Prolyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 581

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 41/113 (36%), Gaps = 8/113 (7%)

Query: 7   LRAELPR----GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           +RA L +    G        +R+  ++   +R      G      P+++ ++ L +    
Sbjct: 27  MRAGLIKKLGAGIYSYMPMGLRVIRKVEAIVREEMNRAGAVECTMPVVQPAE-LWQETGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            ++    +  +QD  G+   ++    ++   +AR    ++  +       +  
Sbjct: 86  FEKMGPELLRIQDRHGRDFVIQPTSEEVVTDIARQELRSYKQLPRNLYQIQTK 138



 Score = 40.2 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 3/86 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V+I  +  D   +  +  +     L  +GI   +     +  G  
Sbjct: 470 DERGIIWPDAIAPFTVVICPIGMDRSEEVRAVAEKLHGELLASGIDVILD-DRGERPGAM 528

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQ 446
               +    P  I  G      G ++
Sbjct: 529 FADWELIGVPHRITIGDKGLKEGQVE 554


>gi|227889526|ref|ZP_04007331.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227850004|gb|EEJ60090.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 643

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 45/137 (32%), Gaps = 1/137 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +                   ++    + 
Sbjct: 499 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNEEAHGAY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + L   G RAE+    ++  G +++ +  +  P  ++ G  E +   + ++    
Sbjct: 559 ADKVREELAKRGFRAEVDH-RNEKLGYKIRESQTQKVPYTLVLGDEEMNANGVNVRRYGT 617

Query: 453 GKELSREIKNNESWREA 469
            +++S+ +    +  +A
Sbjct: 618 EEQISKSLDEFINEIDA 634



 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 55/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  + + +  G++ + TP+L   D+  K           +F
Sbjct: 259 GLPYWMPKGATIRRVVERYIVDKEVAD--GYEHVYTPVLMNVDAY-KTSGHWAHYRDDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 375

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                    A++  ++ D  +   I    + +   + K  D       
Sbjct: 376 REMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDYYFRLSYRDPKNTDKYYANDE 435

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 436 MWERSQSM 443


>gi|226951685|ref|ZP_03822149.1| prolyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|294651367|ref|ZP_06728686.1| proline--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|226837601|gb|EEH69984.1| prolyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|292822769|gb|EFF81653.1| proline--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 571

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 42/154 (27%), Gaps = 8/154 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + +L +     ++ 
Sbjct: 31  MIRKLASGLYSWLPMGTRVLKKVDAIVREEMNRSGALEVFMPVTQPA-ALWEESGRFEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +   +D       L     ++   LAR    N                 +       
Sbjct: 90  GPELLRFKDRHNNDFVLGPTHEEVITDLAR----NELKSYKQLPLNFYQIQTKFRDEIRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           RF      +     + +  A+ E      D +  
Sbjct: 146 RFGVMRSREFIMKDAYSFHANQESLQETYDVMYD 179


>gi|239828654|ref|YP_002951278.1| glycyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239808947|gb|ACS26012.1| glycyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 460

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/231 (8%), Positives = 56/231 (24%), Gaps = 17/231 (7%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            ++   +    +       +  +                   K            +   Y
Sbjct: 240 WKQFCKQWLLSLGMKPENIRLRDHTKEELSHYSN-ATTDIEYKFPFGWGELWGIASRTDY 298

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +         E  + +   +                         + ++ +I A    E 
Sbjct: 299 DLKQHMEYSGEDFRYIDQET--------NERYIPYCIEPSLGADRVTLAFMIDAYDEEEL 350

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE------MFLGSSKNFGNQL 421
                + +  +      + +      +   +  R   I A+      +    S + G + 
Sbjct: 351 EDGTTRTVMRLHPALAPYKAAVFPLSKKLAEGAR--NIFADLSKHFMVDYDESGSIGKRY 408

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  D    P  I         G + ++D    +++   I   +S+ E ++ 
Sbjct: 409 RRQDEIGTPFCITYDFDSEQDGKVTVRDRDTMEQVRIPISELKSFLEEKIQ 459


>gi|260062396|ref|YP_003195476.1| threonyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88783959|gb|EAR15130.1| threonyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 646

 Score = 51.8 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 3/108 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + + L+    +      + P     +       +  Q     L
Sbjct: 512 HRPVMIHRAPFGSMERFVALLLEHTGGNFPLW--LTPQQAIVLPVSEKHENYAQKVLNSL 569

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               IRA +    S+  G +++ A+    P  II G  E + G + ++
Sbjct: 570 ENHEIRALLD-ARSETVGKKIREAEMGKYPFMIIVGDQEMTDGTISVR 616



 Score = 39.8 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 17/47 (36%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R R+   ++   +  G++ + TP +   +      
Sbjct: 262 GLPLWLPKGAALRERLEQFLKKAQKKAGYEMVVTPHIGQKELYVTSG 308


>gi|330752453|emb|CBL87403.1| threonyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 646

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +         V+I T+    +     Q   
Sbjct: 509 NESHRPVMIHRAPFGSLERFVAILLEHTAGNFPLWLMPQQVVILTIS--ENYEKYAQKVL 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +L    IR  +    S+  G +++ A+ +  P  II G  E     L ++
Sbjct: 567 NLLEINEIRGLID-DRSETMGKKIRDAEIKKIPYMIIVGEQEEKSATLSVR 616



 Score = 37.5 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 17/47 (36%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G          +R+R+ D ++      G++ + TP +   +      
Sbjct: 262 GLPLWLPNGAALRSRLEDFLKKAQVKAGYEMVSTPHIGQKELYVTSG 308


>gi|313124951|ref|YP_004035215.1| glycyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312291316|gb|ADQ65776.1| glycyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 596

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 28/100 (28%), Gaps = 6/100 (6%)

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG---M 444
           + +         LR AG+        S + G + +  D    P  I              
Sbjct: 493 ELVDLADEIVDDLRAAGLSV--VYDDSGSIGRRYRRQDEVGTPFCITVDRDGLESDGETT 550

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + +++   G+++   +        A          +L + 
Sbjct: 551 VTVRERDSGRQIRVPVSALADELGAVRGGDR-TFDDLAAE 589


>gi|161869662|ref|YP_001598829.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189083614|sp|A9M375|SYT_NEIM0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161595215|gb|ABX72875.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 637

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|288959315|ref|YP_003449656.1| threonyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911623|dbj|BAI73112.1| threonyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 650

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/367 (10%), Positives = 99/367 (26%), Gaps = 14/367 (3%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  YR    +   K     + +     + +      +   +M       +EA G +
Sbjct: 270 HPKGWTLYRTLETYIRTKLKAADYVEVKTPQLIDSSLFKASGHWDMYGDNMFKVEADGGE 329

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDD--KLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
           +      +N    +      +  + D   ++ E     R        G+  V+       
Sbjct: 330 KLLGIKPMNCPGHVQIFRNGLRSYRDLPIRMAEFGACHRNEPSGALHGIMRVRA----FT 385

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
            D++  F     + SE  +     L +  +    ++   +        G +EL   +E  
Sbjct: 386 QDDAHIFCTEDQVQSEAAEYFKLQLGVYKDLGFDQISVKLALRPDVRTGADELWDRAEGA 445

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ---KPVVFGSVGGGGRYDG 336
                    ++       G  Y     +          +                     
Sbjct: 446 LAQALRDAGLEYEELPGEGAFYGPKVEFHLTDAIGRTWQCGTLQYDPNLPERLDASYIGE 505

Query: 337 LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
             +R +   +           + + ++              V + T+  ++D        
Sbjct: 506 DGARHRPIMLHRAILGSMERFIGMLIEHYAGKFPLWLSPVQVTVATITSEAD--DYAVEV 563

Query: 397 TQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
            ++L+  G+R E+   + K N     +    +  PL ++ G  E     + ++ L    +
Sbjct: 564 AKLLKRKGLRVELDTRNEKINLKV--REHSLQKVPLMLVVGKREAEERTVALRVLGGKDQ 621

Query: 456 LSREIKN 462
               + +
Sbjct: 622 EILALDD 628



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/143 (9%), Positives = 34/143 (23%), Gaps = 2/143 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   IR   +   +  ++TP L  S    K     D     +F +
Sbjct: 265 GSVFWHPKGWTLYRTLETYIRTKLKAADYVEVKTPQLIDSSLF-KASGHWDMYGDNMFKV 323

Query: 74  Q-DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           + D   + + ++        +       +                 +             
Sbjct: 324 EADGGEKLLGIKPMNCPGHVQIFRNGLRSYRDLPIRMAEFGACHRNEPSGALHGIMRVRA 383

Query: 133 VDNVGSSAETADAEMCMMMADTL 155
                +     + ++    A+  
Sbjct: 384 FTQDDAHIFCTEDQVQSEAAEYF 406


>gi|317047868|ref|YP_004115516.1| threonyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316949485|gb|ADU68960.1| threonyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 642

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 88/339 (25%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQVRDEVNSCIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E+        N+I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGTDEMWDRAEVDLAEALKENQIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     +  P       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 SWLAPVQAVVMNITDSQAEYVSELTKKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++       +  +
Sbjct: 594 LVCGEKEVEAGKVAVRTRRGKDLGSMDVDVFVEKLQQEI 632



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/203 (6%), Positives = 53/203 (26%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVRDEVNSCI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA   L +   +
Sbjct: 425 EKRIGTDEMWDRAEVDLAEALKE 447


>gi|187925415|ref|YP_001897057.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|226699128|sp|B2SYU8|SYP_BURPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|187716609|gb|ACD17833.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 578

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  +     +R   ++   +R      G   +  P ++ ++ L +     ++    +   
Sbjct: 38  GIYNYLPVGLRSIRKVEAIVREEMNRAGGIELLMPAVQPAE-LWQESGRWEKYGPELLRF 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D       +     ++   +AR   +++  +       +  
Sbjct: 97  KDRRQSDFVIGPTHEEVVTDIARNQIKSYRQLPVNFYQIQTK 138


>gi|291515296|emb|CBK64506.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Alistipes shahii
           WAL 8301]
          Length = 604

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 3/134 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + V L+                +  +          Q  ++ L
Sbjct: 465 HRPIMIHRAPFGSMERFVAVLLEHTGGKFPLWLSPQQ--VVVLPISEKFNDYAQKVSEFL 522

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
             + +R E+    ++  G +++  + +  P  +I G  E + G++ ++   +G +    +
Sbjct: 523 NRSDVRTEVD-DRNEKIGRKIRDNELKRIPYLLIVGEKEEAEGLVSVRAQGEGDKGQMSL 581

Query: 461 KNNESWREARVAQI 474
           +    +    V + 
Sbjct: 582 EAFRDFIAGLVKEE 595



 Score = 44.8 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R+R+   +R + + YG+  + TP +   +      
Sbjct: 215 GLPLWLPKGAALRDRLEQFLRGVQKEYGYQQVITPHIGNKELYVTSG 261


>gi|326571308|gb|EGE21325.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 639

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 83/311 (26%), Gaps = 9/311 (2%)

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
              +       + +     ++ DY I   N      +  +      D             
Sbjct: 303 WEKSGHWDNYGEMMFTTASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHR 362

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L G+ + +     D++  F   A +  E ++ +   L +  +     +   +  
Sbjct: 363 NEPSGSLHGI-MRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                 G +EL  ++E       ++  +        G  Y     +        + +   
Sbjct: 422 RPEKRVGADELWDLAEQALADALDNAGLDWELQAGEGAFYGPKIEFSLQDCIGRVWQCGT 481

Query: 322 ---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGP 377
                                R +   +           + + ++         +     
Sbjct: 482 LQLDFNLPERLNAEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPTWLAPQQV 541

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V++   D  +DS+         L   G RA   L  ++  G +++       P  +I G 
Sbjct: 542 VVMNITDKQADSVGD---VVSKLNAKGYRAISDL-RNEKIGFKIRERTLERIPFMLILGD 597

Query: 438 GERSRGMLQIK 448
            E   G + ++
Sbjct: 598 KEVESGTVNVR 608



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R + ++ G+  I+TP +       K     D  
Sbjct: 255 MQEQAP-GMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKS-GHWDNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+    + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 GEMMFT-TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH 370


>gi|326574765|gb|EGE24699.1| threonyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 639

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 83/311 (26%), Gaps = 9/311 (2%)

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
              +       + +     ++ DY I   N      +  +      D             
Sbjct: 303 WEKSGHWDNYGEMMFTTASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHR 362

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L G+ + +     D++  F   A +  E ++ +   L +  +     +   +  
Sbjct: 363 NEPSGSLHGI-MRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                 G +EL  ++E       ++  +        G  Y     +        + +   
Sbjct: 422 RPEKRVGADELWDLAEQALADALDNAGLDWELQAGEGAFYGPKIEFSLQDCIGRVWQCGT 481

Query: 322 ---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGP 377
                                R +   +           + + ++         +     
Sbjct: 482 LQLDFNLPERLNAEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPTWLAPQQV 541

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V++   D  +DS+         L   G RA   L  ++  G +++       P  +I G 
Sbjct: 542 VVMNITDKQADSVGD---VVSKLNAKGYRAISDL-RNEKIGFKIRERTLERIPFMLILGD 597

Query: 438 GERSRGMLQIK 448
            E   G + ++
Sbjct: 598 KEVESGTVNVR 608



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R + ++ G+  I+TP +       K     D  
Sbjct: 255 MQEQAP-GMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKS-GHWDNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+    + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 GEMMFT-TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH 370


>gi|40062682|gb|AAR37595.1| threonyl-tRNA synthetase [uncultured marine bacterium 314]
          Length = 638

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 1/88 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+    +   S+  +  +   +    AGI  E+ L  +K    +++       PL +
Sbjct: 537 WLAPIQAVVLPIASEFDNYAKKIFEQCMKAGINTEVDLK-NKKINYKIREHSLSKVPLLL 595

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           I G  E     + I+ L   K+ +  + 
Sbjct: 596 ICGEKEVKGKSVTIRKLGSEKQETLSLD 623



 Score = 36.7 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 40/113 (35%), Gaps = 4/113 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKGVFS 72
           G      K   +   ++  +R   +  G+  I TP  E  D +L +     ++  + +F+
Sbjct: 262 GAVFWHHKGWTLFQTLVGYMRLKQKKAGYKEINTP--EILDKNLWEQSGHWEKFGENMFT 319

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            +  D +  +++        +   +   +    P R    G V R E  G   
Sbjct: 320 SETPDKKTFAIKPMNCPGCLQIFNQGLKSYRDLPLRLSEFGKVHRYEPSGALH 372


>gi|325127774|gb|EGC50682.1| threonyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 637

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|319410089|emb|CBY90425.1| threonyl-tRNA synthetase (threonine-tRNA ligase; ThrRS) [Neisseria
           meningitidis WUE 2594]
          Length = 637

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|316983701|gb|EFV62682.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 648

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 605 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 648



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|227872945|ref|ZP_03991245.1| proline--tRNA ligase [Oribacterium sinus F0268]
 gi|227841197|gb|EEJ51527.1| proline--tRNA ligase [Oribacterium sinus F0268]
          Length = 478

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 24/134 (17%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                       V I  +  + +  L K       L  AG+R ++   S K  G   K+A
Sbjct: 281 GLVLPPRIAPVQVNIIPIQQNKEGVLDKAFDLMNTLMDAGLRVKVD-DSDKTPG--FKFA 337

Query: 425 DR--RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           D   R  PL +  G  +   G + +                   R     +I +    LV
Sbjct: 338 DSEVRGIPLRLEIGPKDIEAGQVVL------------------VRRDTREKIVVSFENLV 379

Query: 483 STVKKILQENKEEI 496
              KK+L++ ++++
Sbjct: 380 EESKKLLEQIQKDM 393


>gi|170036087|ref|XP_001845897.1| threonyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167878588|gb|EDS41971.1| threonyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 699

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/218 (11%), Positives = 62/218 (28%), Gaps = 3/218 (1%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           EK   E+ V ++  +    + ++         G   + G   +  +   +    Q   + 
Sbjct: 481 EKYLGEIEVWNDAEKALAESLDKFGEPWKENPGDGAFYGPKIDITIMDALKRAHQCATIQ 540

Query: 326 GSVGGGGRYD-GLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                  R++   +     +  P       +G    ++A+ +   +      + P  I  
Sbjct: 541 LDFQLPIRFNLNYIDDNGEKKRPVIVHRAILGSVERMIAILTENYAGKWPFWLSPRQIMV 600

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +                L  AG  AE  L +      +++ A        ++ G  ERS 
Sbjct: 601 VPVGPAYDEYADKVRLRLHDAGFMAEADLDAGDTMNKKIRNAQLAQFNFILVVGEKERSS 660

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             + ++           ++        +  +      +
Sbjct: 661 ETVNVRTRDNKVHGEVSVEELLVKLRRQADEFIKNEDQ 698



 Score = 43.7 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR  Y   GF  + +P + Y+  L +         + +FS +  +
Sbjct: 323 FQPKGAHIYNTLMNFIRAEYRKRGFQEVISPNI-YNAKLWQTSGHWQHYAENMFSFE-SE 380

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 381 KETFALKPMNCPG 393


>gi|88607718|ref|YP_505783.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598781|gb|ABD44251.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 615

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 61/201 (30%), Gaps = 8/201 (3%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   +   I + +R      G+  I+TP++     L +     ++  + +F + D +
Sbjct: 242 WHDKGWTLYRTIEEYLRKKLRENGYTEIKTPIM-LDRKLWEKSGHWEKFRENMFIVSDQN 300

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            Q ++++        +       +            +    +     +            
Sbjct: 301 SQELAIKPMNCPCHVQIFKSKTRSYKDLPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDD 360

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +       ++   +    + +    ND+     + K+ D          +   ++ +  +
Sbjct: 361 AHIFCTHDQIRDEVRKFYKLLVEVYNDFGFKNIDVKLSD-------RPEERIGSDEMWDM 413

Query: 198 RAIDKLDKFGLQGVKLLLGEG 218
                +D    +GVK  + +G
Sbjct: 414 AERSLMDSMDDEGVKYTINKG 434



 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 69/234 (29%), Gaps = 10/234 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E        + +  +     +   +        G +E+  ++E   
Sbjct: 359 DDAHIFCTHDQIRDEVRKFYKLLVEVYNDFGFKNIDVKLSDRPEERIGSDEMWDMAERSL 418

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYD 335
               +   +K +     G  Y     +        +    +              G  Y 
Sbjct: 419 MDSMDDEGVKYTINKGDGAFYGPKLEF---TLKDALGRNWQCGTIQLDFVLPSRLGAYYV 475

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G         +        + R I  L    +       + PV +  +  +S++L     
Sbjct: 476 GSDGNKHHPVMIHRAILGTLERFIGILIESYAGNLP-AWLAPVQLEILTVNSNALEYATT 534

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
                R   IR E+  G  ++ G +++ +     P+  + G+ E +   + ++ 
Sbjct: 535 LANKAREHNIRVELNSGE-ESIGQKIRKSIFNKIPVLWVVGSAETADCTVSVRH 587


>gi|15676618|ref|NP_273762.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|22654143|sp|Q9K095|SYT_NEIMB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|7225946|gb|AAF41133.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325140125|gb|EGC62654.1| threonyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200596|gb|ADY96051.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 637

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     D     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWDNYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|15829217|ref|NP_326577.1| threonyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|22654134|sp|Q98PH6|SYT_MYCPU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14090161|emb|CAC13919.1| THREONYL-TRNA SYNTHETASE 1 (THREONINE--TRNA LIGASE) (THRRS)
           [Mycoplasma pulmonis]
          Length = 589

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/333 (10%), Positives = 83/333 (24%), Gaps = 9/333 (2%)

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
            +        +++ ++                I +       +         R       
Sbjct: 258 HLAHYQETMFKSLEVENEKLIPRPMTCPHHIIIYDAFPRSYRELPLRLSEQSRLYRYEKS 317

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKG--ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTI 263
             L G++ +     T+      +    +     I+++   L I   K  H    L     
Sbjct: 318 GALTGLERVRTMDLTEGHIFIRQDQIKDEVLNMINLIQETLKIFKIKIDHVALSLRDNDK 377

Query: 264 AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA--ILGFPVMNEKQK 321
                 +++   +E   K   + N+I           Y     ++   +L   +     +
Sbjct: 378 EKFFDDDQMWDQAESALKEILDQNKIDYIVEKGEAAFYGPKIDFQVKTVLNNIITMSTIQ 437

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                       Y       +   +   G      R +  L            + P  + 
Sbjct: 438 LDFLLPRKFNISYIAPDGSKQTPLMIHRGLIGTYERFVSILLEQTKGNFPFW-LSPSQVI 496

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +    +           +       E+     +    +++ A        II G  E  
Sbjct: 497 VLPIAKEFKEYAFEIYSKIFKQNFNVEID-NRDETINKKIREAQINKYKYQIIIGKQEME 555

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              + I+    GK  +  + + ES+ E   +Q 
Sbjct: 556 NKTIAIR--EYGKVQTITM-DLESFIEKIKSQR 585



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF     K + I+  I   I  +   YGF+ + +P     +SL           + +F  
Sbjct: 211 GFPIWLKKGMLIKRAIEKEILYLDRKYGFEEVLSPHF-GEESLYIKSGHLAHYQETMFKS 269

Query: 74  QDDDGQWISLRYDLTAP 90
            + + + +  R  +T P
Sbjct: 270 LEVENEKLIPRP-MTCP 285


>gi|326562776|gb|EGE13071.1| threonyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326563180|gb|EGE13448.1| threonyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 639

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 84/311 (27%), Gaps = 9/311 (2%)

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
              +       + +     ++ DY I   N      +  +      D             
Sbjct: 303 WEKSGHWDNYGEMMFTTASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHR 362

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L G+ + +     D++  F   A + SE ++ +   L +  +     +   +  
Sbjct: 363 NEPSGSLHGI-MRVRGFTQDDAHIFCTNAQIRSEALNFIKLTLDVYKDFGFDHIQMKLST 421

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                 G +EL  ++E       ++  +        G  Y     +        + +   
Sbjct: 422 RPEKRVGADELWDLAEQALADALDNAGLDWELQAGEGAFYGPKIEFSLQDCIGRVWQCGT 481

Query: 322 ---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGP 377
                                R +   +           + + ++         +     
Sbjct: 482 LQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQV 541

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V++   D  +DS+         L   G RA   L  ++  G +++       P  +I G 
Sbjct: 542 VVMNITDKQADSVGD---VVSKLNAKGYRAISDL-RNEKIGFKIRERTLERIPFMLILGD 597

Query: 438 GERSRGMLQIK 448
            E   G + ++
Sbjct: 598 KEVESGTVNVR 608



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R + ++ G+  I+TP +       K     D  
Sbjct: 255 MQEQAP-GMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKS-GHWDNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+    + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 GEMMFT-TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH 370


>gi|256384406|gb|ACU78976.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385238|gb|ACU79807.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455488|gb|ADH21723.1| threonine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 639

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 48/143 (33%), Gaps = 21/143 (14%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  +   L+  +   +       V I  +     +L    +  Q L+   IR+ + 
Sbjct: 518 IGTYERFIATLLEQTKGVLSLWLAPKQVEIIPIS--ESNLEYANLIHQKLKKEFIRSHID 575

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           L   +    +++ A  +  P  ++ G  E     +  +                  +   
Sbjct: 576 LRDER-LSYKIRDAQTKKVPYQLVLGNKEVENNTITYR------------------QYGS 616

Query: 471 VAQITIPISELVSTVKKILQENK 493
            AQIT+PI E +  +K+ + + K
Sbjct: 617 DAQITVPIQEFIDMLKQQINDKK 639



 Score = 40.6 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 4/79 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          ++N I   +R     Y + P+ETP +   +   K     D   + +F  
Sbjct: 257 GLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIGTVELY-KTSGHWDHYGEDMFQP 315

Query: 74  QDDD---GQWISLRYDLTA 89
            +      +   LR     
Sbjct: 316 FNGGKGSDEQFILRPMNCP 334


>gi|307326749|ref|ZP_07605941.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306887512|gb|EFN18506.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 659

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/365 (11%), Positives = 94/365 (25%), Gaps = 45/365 (12%)

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG---ILEKIGLH 185
            +                        L+A+    ++       R   +    + E   ++
Sbjct: 322 FETSGHLPHYMDGMFPPMEFEGQDYYLKAMNCPMHNLIFRARGRSYRELPLRLFEFGTVY 381

Query: 186 GDDKLNERLIVLRAI-----DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             +K      + RA      D       + +   L    T    D  +   L    +++ 
Sbjct: 382 RYEKSGVVHGLTRARGFTQDDSHIYCTKEQMADELDNLLTFVL-DLLRDYGLNDFYLELS 440

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
               S        +  E  +      +     +V+             ++    I R  +
Sbjct: 441 TRDDSDKFIGGPEQWEEATEELRKAAEKQGLELVMDPGGAAFYGPKISVQARDAIGRTWQ 500

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
             T    +     P   E +              DG   +    +    G    I R   
Sbjct: 501 MST---IQVDFNQPERFELEYTAA----------DGSRQQPVMIHRALFGS---IERFFA 544

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L    +       + PV    +      +   + +    +  G+R E+   S +    +
Sbjct: 545 VLLEHYAGAFP-AWLAPVQAVGIPIGDGHVPYLEEFAAQAKAKGLRMEVDSSSDR-MQKK 602

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ A +   P  +I G  + +   +  +    G + +                  IPI E
Sbjct: 603 IRNAQKSKIPFMVIVGDEDVTNNAVSFRY-RDGSQKNG-----------------IPIDE 644

Query: 481 LVSTV 485
            ++ +
Sbjct: 645 ALAEI 649


>gi|218661849|ref|ZP_03517779.1| prolyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 354

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/414 (13%), Positives = 112/414 (27%), Gaps = 67/414 (16%)

Query: 41  GFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAE 97
           G   +  P L+ ++ L +     D   K +  ++D   + +       ++   + R   +
Sbjct: 1   GAIELSMPTLQSAE-LWQESGRYDAYGKEMLRIKDRQDRPMLYGPTNEEMVTDIFRSSVK 59

Query: 98  NFDTIVFPCRTYR----IGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           ++  +       +         R        F        D     AE +  +M      
Sbjct: 60  SYKDLPLNLYHIQLKFRDEIRPRFGTMRSREFMMKDAYSFDLTREGAEHSYNKMFAAYLR 119

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
           T E +G               L  I                                ++ 
Sbjct: 120 TFERLG---------------LRAI-------------------------------PMRA 133

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
             G    + S +F   A+    ++     F+  D+       ++ V+G  A  + +  L 
Sbjct: 134 DTGPIGGNLSHEFIILADTGESEVFCHKDFVGFDIPDE-RTDFDSVEGLQAIFEKWTSLY 192

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
             +  +      +   +      RG+E      +       +  + Q P         G 
Sbjct: 193 AATSEMHDEAAFNAVPESDRLSARGIEVGHIFYFGTKYSETMGAKVQGPDGKEHFVHMGS 252

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y         + VPA   +      I+          ++     V+I     D       
Sbjct: 253 Y----GIGPTRLVPAIIEASHDDNGII-------WPASVAPFDIVVINMKAGDQACDDTC 301

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           ++    L  AG          +  G +   AD    P+ II G    + G +++
Sbjct: 302 ELIYAALTKAGKDVLYDDTDDRA-GTKFATADLIGVPVQIIAGPRAVANGEVEV 354


>gi|68491354|ref|XP_710514.1| hypothetical protein CaO19.5685 [Candida albicans SC5314]
 gi|46431727|gb|EAK91259.1| hypothetical protein CaO19.5685 [Candida albicans SC5314]
          Length = 706

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D++R  Y   G++ + TP + YS  L +         + +FS + + 
Sbjct: 324 WLPHGARIYNTLVDTLRTEYRKRGYEEVITPNM-YSTKLWETSGHWQNYKENMFSFEVEK 382

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 383 -ETFGLKPMNCPG 394


>gi|317969695|ref|ZP_07971085.1| threonyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 590

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +    +     +     L+ AG+RA +     +  G  ++  ++   P+  + G  
Sbjct: 487 QIRLLPVTDEVTGYAESVAAALKAAGVRASVDHSGDR-LGKLIRNGEQMKIPVLGVIGAK 545

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           E   G + ++   +G   S E++   +  +       
Sbjct: 546 EAEGGTISLRSRREGDLGSIELETVVAAAKEANQDRE 582



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 14/115 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I +  R ++ N G++ + TP +    SL K     D  ++ +F  
Sbjct: 207 GLVFWHPRGARMRLLIENLWRELHFNAGYELLYTPHVADI-SLWKTSGHLDFYSESMFGP 265

Query: 74  QDDDGQWISLRYD------LT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
              D +   L+        LT A   R           P R   +G V+R E+ G
Sbjct: 266 MQVDEREYQLKPMNCPFHVLTYASTLRSY------RELPIRWAELGTVYRYERPG 314


>gi|222874274|gb|EEF11405.1| predicted protein [Populus trichocarpa]
          Length = 191

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/115 (9%), Positives = 45/115 (39%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++ +L  G  +     +R+  ++   +R      G   +  P+++ ++ + +  
Sbjct: 26  MTRAGLIK-KLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAVEVTMPVVQPAE-MWEET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              ++    +  ++D  G+   ++    ++   +AR   +++  +       +  
Sbjct: 84  GRFEKMGPELLRIKDRHGRDFVIQPTSEEVVTDIARQELKSYKQLPKNFYQIQTK 138


>gi|238882425|gb|EEQ46063.1| threonyl-tRNA synthetase [Candida albicans WO-1]
          Length = 706

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D++R  Y   G++ + TP + YS  L +         + +FS + + 
Sbjct: 324 WLPHGARIYNTLVDTLRTEYRKRGYEEVITPNM-YSTKLWETSGHWQNYKENMFSFEVEK 382

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 383 -ETFGLKPMNCPG 394


>gi|218282135|ref|ZP_03488434.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989]
 gi|218216861|gb|EEC90399.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989]
          Length = 587

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +RN +       +   G+  I+TP++   + L +     D     +++ 
Sbjct: 208 GMPIFLPDGMILRNILEQYWYQEHTKEGYQFIKTPIMMSKE-LWELSGHWDHYKDNMYTS 266

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 267 M-VDDREFAIKPMNCPG 282



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 45/134 (33%), Gaps = 4/134 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D   ++     +    +      + + ++               ++  +      +    
Sbjct: 445 DADGTKKTPIMLHRVVYGSVERFIGILIEHFGGHFPLWLAPRQFVVIPVH-HEKHVEYAN 503

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                L   G+RA +    ++  G +++ A  +     I+ G GE+    + I+    GK
Sbjct: 504 KVCDALTALGMRATVD-SRNEKLGYRVREAQLQKVTYQIVVGDGEQENNTVTIR--QSGK 560

Query: 455 ELSREIKNNESWRE 468
           + S  +  NE+  +
Sbjct: 561 KDSVTLSLNEALAK 574


>gi|167422088|ref|ZP_02313841.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|166958900|gb|EDR55921.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
          Length = 369

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 102/356 (28%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 24  FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 83

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 84  EFGSCHRNEPSGALHGL-MRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 142

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +EL   +E    +    N I        G  Y     +       
Sbjct: 143 IVVKLSTRPEKRIGSDELWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 202

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 203 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 261

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 262 TWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 320

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           ++ G  E   G + ++        +R  K+  S        + + + +L++ ++  
Sbjct: 321 LVCGDKEVESGKIAVR--------TRRGKDLGSLD------VNVVVDQLLAEIRSR 362


>gi|257064333|ref|YP_003144005.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia
           heliotrinireducens DSM 20476]
 gi|256791986|gb|ACV22656.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia
           heliotrinireducens DSM 20476]
          Length = 586

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF        +++N +++   ++   Y +D +ETP +  S  L +     D   + +++ 
Sbjct: 213 GFPFWLPNGTKLKNALIEYWHDMMAKYNYDEVETPQI-LSRKLWETSGHWDHYKENMYTT 271

Query: 74  QDDDGQWISLRYDLTAPLA 92
              D +  +++        
Sbjct: 272 VI-DEEDYAVKPMNCPGAC 289



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 51/128 (39%), Gaps = 7/128 (5%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
               G     + + + + +      + P+ +  +     +        Q+LR AG+RA +
Sbjct: 462 RAGFGSFERFIGMLTEQYAGKFPTWLAPLQVKILPVSEKTRDYALEVGQVLRDAGVRAVV 521

Query: 410 FLGSSKNFGNQLKYA---DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
                +  G +++ A   DR   P  +I G  ER    + ++D    + ++R++    + 
Sbjct: 522 D-TRDEKIGYKIREARSTDR--VPYMLILGEQERDGKYISVRD-RSNETVARQLDEFIAD 577

Query: 467 REARVAQI 474
             A +A+ 
Sbjct: 578 ITAEIAER 585


>gi|225550529|ref|ZP_03771478.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379683|gb|EEH02045.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 580

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/285 (9%), Positives = 80/285 (28%), Gaps = 6/285 (2%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L+E  I+ R        G + V+ ++ E              + +    ++        
Sbjct: 292 RLSEHSILHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHEVIN-AFKMIQEAQEGLG 350

Query: 249 EKSMHELYELVKGTIAGEKGFN-ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            K+      L       +   + ++   S+   +     ++I     +     Y     +
Sbjct: 351 IKTFEIHLSLNDPNDKEKYYDDPQMWEHSQNALRKMLKDHKIPYKEMVGEAAFYGPKIDF 410

Query: 308 EA--ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           +   +L   +     +            Y    +      +   G      RL+  L   
Sbjct: 411 QVKTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLAILLEQ 470

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +      ++    +++      +     LR   +R+ + L + +    +++ A 
Sbjct: 471 TKGVLPLWLSPVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNER-LSKKIREAQ 529

Query: 426 RRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREA 469
            +  P  I+ G  E      +  +     +  +  + +     E 
Sbjct: 530 IQKIPYQIVVGDEEIKNDKMVTYRRYGSEETTTVSVDDFIKVLEN 574



 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 59/209 (28%), Gaps = 15/209 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I++++   I  +   + FD + TP+L   D   K     D     +FS 
Sbjct: 199 GLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDLY-KTSGHWDHYKDNIFSP 257

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF-IQCD 132
              D + + LR  +T P       +        R+YR  P+  +E     R+        
Sbjct: 258 VQIDNEVLILRP-MTCP------HHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLTG 310

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
            + V           C       E +   +               I   +    D +   
Sbjct: 311 FERVREMILEDCHVFCRPDQIEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPNDKEKYY 370

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
               +       +     ++ +L + +  
Sbjct: 371 DDPQMW------EHSQNALRKMLKDHKIP 393


>gi|171920625|ref|ZP_02695822.2| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|188524282|ref|ZP_03004325.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867906|ref|ZP_03079904.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273446|ref|ZP_03205982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554092|ref|YP_002284982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|238065120|sp|B5ZC42|SYT_UREU1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171903344|gb|EDT49633.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|195660016|gb|EDX53396.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660383|gb|EDX53642.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249966|gb|EDY74746.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541593|gb|ACI59822.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
          Length = 580

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/285 (9%), Positives = 80/285 (28%), Gaps = 6/285 (2%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L+E  I+ R        G + V+ ++ E              + +    ++        
Sbjct: 292 RLSEHSILHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHEVIN-AFKMIQEAQEGLG 350

Query: 249 EKSMHELYELVKGTIAGEKGFN-ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            K+      L       +   + ++   S+   +     ++I     +     Y     +
Sbjct: 351 IKTFEIHLSLNDPNDKEKYYDDPQMWEHSQNALRKMLKDHKIPYKEMVGEAAFYGPKIDF 410

Query: 308 EA--ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           +   +L   +     +            Y    +      +   G      RL+  L   
Sbjct: 411 QVKTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLAILLEQ 470

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +      ++    +++      +     LR   +R+ + L + +    +++ A 
Sbjct: 471 TKGVLPLWLSPVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNER-LSKKIREAQ 529

Query: 426 RRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREA 469
            +  P  I+ G  E      +  +     +  +  + +     E 
Sbjct: 530 IQKIPYQIVVGDEEIKNDKMVTYRRYGSEETTTVSVDDFIKVLEN 574



 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 59/209 (28%), Gaps = 15/209 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I++++   I  +   + FD + TP+L   D   K     D     +FS 
Sbjct: 199 GLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDLY-KTSGHWDHYKDNIFSP 257

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF-IQCD 132
              D + + LR  +T P       +        R+YR  P+  +E     R+        
Sbjct: 258 VQIDNEVLILRP-MTCP------HHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLTG 310

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
            + V           C       E +   +               I   +    D +   
Sbjct: 311 FERVREMILEDCHVFCRPDQIEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPNDKEKYY 370

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
               +       +     ++ +L + +  
Sbjct: 371 DDPQMW------EHSQNALRKMLKDHKIP 393


>gi|170078264|ref|YP_001734902.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|226701348|sp|B1XP53|SYP_SYNP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169885933|gb|ACA99646.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 601

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 6/110 (5%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++       + ++  +     L  AG+   +   + +  G + K A+ 
Sbjct: 494 IWPVAIAPYHAVVVVPNVKSEEQMAAAEKLYADLNAAGVETILDDRNERA-GVKFKDAEL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI----KNNESWREARVA 472
              P  ++ G      G +++    +G     ++       ++W EA   
Sbjct: 553 IGIPFRVVTGKS-LKDGKVEVVRRKEGDRQDLDLDAVVATLKNWVEAAGQ 601



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/105 (12%), Positives = 34/105 (32%), Gaps = 5/105 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
           RG         R+  ++   +R      G      P L+ ++   +    +        +
Sbjct: 37  RGIYAYLPLMWRVLQKVSQIVREEMNATGAQETLLPQLQPAEIWQESGRWDTYTQAEGIM 96

Query: 71  FSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           FSL+D     + L     ++   +A+ +  ++  +       +  
Sbjct: 97  FSLRDRLDGELGLGPTHEEVITTIAKDMIRSYRQLPQHLYQIQTK 141


>gi|261339515|ref|ZP_05967373.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288318328|gb|EFC57266.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 622

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 94/347 (27%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E         N I     +  G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDETWDRAEADLAVALEENGIPFEYQLGEGAFYGPKIEFTLYDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPQRLSASYVGEDNERQVPVMIHRAILGSLERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         +  TQ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQVVVMNITDSQADYVKELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL     +S  I+  +    +R  Q 
Sbjct: 574 LVCGDKEVEAGKVAVRTRRGKDLGSLD-VSEVIEKLQQEIRSRSLQQ 619



 Score = 40.2 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 11/155 (7%), Positives = 37/155 (23%), Gaps = 3/155 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     D  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 352

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                      +     + ++   +   +  V   
Sbjct: 353 LMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDM 387


>gi|121708695|ref|XP_001272218.1| threonyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
 gi|119400366|gb|EAW10792.1| threonyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
          Length = 743

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/483 (10%), Positives = 122/483 (25%), Gaps = 85/483 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R+ Y   G+  ++TP +   D  + K           +F 
Sbjct: 339 GCPFLLPNGTKIFNALQALLRSEYRKRGYQEVQTPNM--YDVGVWKTSGHWAHYKDDMFK 396

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+             +F       R+YR  P+   +     R        
Sbjct: 397 L-DVEKREWALKPMNCPG-------HFVLFGHRERSYRELPLRIADFGVLHRNEASGALS 448

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                   +  D  +          +    +              +  K+    +  L +
Sbjct: 449 GLTRVRKFQQDDTHIFCTQDQISSEIEGLFDFLQSIYGLFGFTFKL--KLSTRPEKYLGD 506

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV-SFLSIDLEKS 251
                 A ++L        K    +   D       G  +     D +   F    ++  
Sbjct: 507 LDTWNYAEEQLKSAMT---KFKGADWTIDEGDGAFYGPKIDITIADALKREFQCATIQLD 563

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                      +  EKG   +    +            +    ++      +   +  IL
Sbjct: 564 YQAPINFKLEYMTNEKGQAVMEESKKEGETKSNEPGPGRARPVVIHRAIIGSFERFLGIL 623

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                              GG++   +S  +   VP                        
Sbjct: 624 IEHF---------------GGKWPFWISPRQILIVPVMPAV------------------- 649

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                          +D + + Q     LR   +  ++ +  +     +++         
Sbjct: 650 ---------------NDYVEELQQI---LRGDKLNVDIDISGN-TMQKKIRTGQLAQYNF 690

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             + G  E+    + I++                    +   + +P+ E    ++ IL++
Sbjct: 691 IFVVGAQEKESRSVNIRNRDD--------------PATQNKGVMVPLEEAREKLR-ILRK 735

Query: 492 NKE 494
            ++
Sbjct: 736 ERK 738


>gi|329849735|ref|ZP_08264581.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328841646|gb|EGF91216.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 640

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 75/266 (28%), Gaps = 12/266 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F +   +  E    +     I  +  M   Y  +        G +     +E + 
Sbjct: 381 DDAHIFCREDQIVEETAKFVRLTKLIHADLGMETAYINLATRPEIRAGSDAFWDKAEGML 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                   ++       G  Y     +  +            +    V         V+ 
Sbjct: 441 AEAAKQAGVEPVIAEGDGAFYAPKLDF-IVKDAIGREWTCGTLQLDYVLPERLDAEYVAE 499

Query: 341 FKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +  P       +G     + +     +      + PV +      SD+    +  TQ
Sbjct: 500 DGSRQRPVMLHRAILGSFERFIGIMIENFAGKFPLWLAPVQVVVAPITSDANPYAEKVTQ 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRR----NCPLAIIQGTGERSRGMLQIKDLAKGK 454
            LR AG+R E  L + K     + Y  R       P+  + G  E   G + ++ L    
Sbjct: 560 SLRAAGLRVEADLRNEK-----INYKVREHSVAKVPVIAVVGRKEAETGEVALRFLGSDG 614

Query: 455 ELSREIKNNESWREARVAQITIPISE 480
           +    + +     +       +  S+
Sbjct: 615 QTILSLADAVQRLQTDATPPDLKQSD 640



 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   +   +   +R   +  G+  ++TP +    S  +     ++    +F 
Sbjct: 259 RGMVFWHPKGWVLWRVLEAYMRRRLDASGYVEVKTPQV-LDRSFWEQSGHWEKYRANMFV 317

Query: 73  LQDDDGQWISLRYDLTAPLA 92
            +  +G+ +SL+        
Sbjct: 318 CETVEGETLSLKPMNCPGHV 337


>gi|329769169|ref|ZP_08260589.1| prolyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328839388|gb|EGF88966.1| prolyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 566

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 41/103 (39%), Gaps = 2/103 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +      L+       + + + +   + L  AG    ++   ++  G +   AD 
Sbjct: 463 IWPKEVTPYQVHLVCVDIKKEEQVKQSEELYKQLTEAGYEV-LYDDRAERAGVKFNDADL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              PL ++ G      G++++K+    +++  ++++  S  EA
Sbjct: 522 IGIPLQVVVGKK-VGDGIVEVKERKTLEKVDTKVEDVLSKVEA 563



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 1/82 (1%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K  +  ++  G         ++   I   IR+ +   G   +  P+L+  D   K     
Sbjct: 28  KAGMVKQVSAGVYTYLPLATKVIQNIEKVIRDEHAKIGASELLMPILQSED-YWKQSGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
            +    +  + D      +L  
Sbjct: 87  YKMGDELIRVTDRKNAGYALSP 108


>gi|294463365|gb|ADE77216.1| unknown [Picea sitchensis]
          Length = 215

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 27/93 (29%), Gaps = 2/93 (2%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R++  L    +            I        S          +  AG   ++   S +
Sbjct: 98  ERMLAILLEHYAGKWPFWLSPRQAI-VCPVSEKSSDYALRVRDQIHQAGYYVDVD-TSDR 155

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +++ A        ++ G  E + G + ++
Sbjct: 156 KIQKKIREAQLAQYNYILVVGEEEANTGQVSVR 188


>gi|224476673|ref|YP_002634279.1| glycyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254781880|sp|B9DNL1|SYG_STACT RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|222421280|emb|CAL28094.1| putative glycyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 463

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/186 (9%), Positives = 43/186 (23%), Gaps = 3/186 (1%)

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
               K            +   Y+         +  K     +      Y    S    + 
Sbjct: 279 DIEYKFPFGWGELWGIASRTDYDLKQHSEFSGDDFKYHDPETNEKYIPYCIEPSLGADRV 338

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
             A          +   K   +  +    + P     +        +     + L +   
Sbjct: 339 TLAFLCDAYDREGVEGSKDERTVLHFHPAIAPYKAAVLPLSKKLSEEAIKVYEQL-SENF 397

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             +     S++ G + +  D    P  I           + ++D    +++   I     
Sbjct: 398 TVDFD--ESQSIGKRYRRQDEIGTPYCITFDFDSLEDQQVTVRDRDSMEQVRMPISELND 455

Query: 466 WREARV 471
           +   +V
Sbjct: 456 FISEKV 461


>gi|241888520|ref|ZP_04775828.1| prolyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864787|gb|EER69161.1| prolyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 572

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 4/112 (3%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K  +  ++  G         R+  +I   IR  +   G   +  P+L+ SD   K     
Sbjct: 34  KAGMVKQVSAGVYTYLPLATRVIQKIEKVIREEHSKIGAAELLMPILQ-SDEYWKKSGRW 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           D+  + +  + D      +L     ++ +     +  ++  +       +  
Sbjct: 93  DKMGEELIRVTDRKKAGYALSPTAEEIVSQTVNNMVTSYKQLPMNLYQIQTK 144



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 45/146 (30%), Gaps = 8/146 (5%)

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE-----SSTNNIKEMGPVLITTM 383
                Y     R     +   G  +    +   ++             +      L+   
Sbjct: 427 AMDVTYLDANGRANHFYMGCYGIGV-TRCISAIIEQHNDEKGIIWPKEVAPYQVHLVCVD 485

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
               D +         L  AG    ++   ++  G +   AD    PL ++ G      G
Sbjct: 486 VKKEDQVKLSDELYAQLTAAGYEV-LYDDRAERAGVKFNDADLIGIPLQVVVGKK-AGEG 543

Query: 444 MLQIKDLAKGKELSREIKNNESWREA 469
           ++++K+    +++  ++ +  +  EA
Sbjct: 544 IVEVKERQTLEKVDTQVVDVLAKVEA 569


>gi|21220031|ref|NP_625810.1| threonyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289772757|ref|ZP_06532135.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|22654145|sp|Q9L278|SYT_STRCO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|6822227|emb|CAB70933.1| threonine-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289702956|gb|EFD70385.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 658

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/390 (12%), Positives = 94/390 (24%), Gaps = 24/390 (6%)

Query: 90  PLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
            + R V E                     + +         +    +       E  D  
Sbjct: 288 GIIRRVMEDYSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYY 347

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  M       +   R   +  +  R    G + +    G      R       D     
Sbjct: 348 LKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC 407

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
             + +   L     D +  F           D  +   + D EK +       + T    
Sbjct: 408 TREQMSEEL-----DKTLTFVLNLLRDYGLNDFYLELSTKDPEKFVGSDEAWEEATETLR 462

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
           +         ELV   G  +      S   R     T  +    L F +           
Sbjct: 463 QVAE--KQNLELVADPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFSL----- 515

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                  Y           +        I R    L    +       + PV    +   
Sbjct: 516 ------EYTAADGAKTRPVMIHRALFGSIERFFAVLLEHYAGAMP-PWLAPVQAVGIPVG 568

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              +   + +    R  G+R ++   S +    +++   ++  P  II G  +   G + 
Sbjct: 569 DAHVQYLEEFAAEARRKGLRVDVDASSDR-MQKKIRTQQKQKVPFMIIVGDEDMHGGTVS 627

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITI 476
            +    G + +   ++    +   V +  I
Sbjct: 628 FRY-RDGSQENGIPRDQALAKLVDVVERRI 656


>gi|304397616|ref|ZP_07379493.1| threonyl-tRNA synthetase [Pantoea sp. aB]
 gi|304354788|gb|EFM19158.1| threonyl-tRNA synthetase [Pantoea sp. aB]
          Length = 642

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/347 (12%), Positives = 94/347 (27%), Gaps = 11/347 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +  N N I+       G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGTDEMWDRAEEDLAAALNENNIEFEFQPGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     +  P       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPKRLEATYVGENNDRQTPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P+ +  M+         +  T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPLQVVVMNITDGQAEYVESLTRKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + +     KDL     +   +   +    +R  Q 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSMD-VDVFVAKLQQEVRSRNLQQ 639



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/197 (7%), Positives = 52/197 (26%), Gaps = 11/197 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHVFCTEEQVRDEVNSCI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKL 203
           + ++    +  RA + L
Sbjct: 425 EKRIGTDEMWDRAEEDL 441


>gi|282896497|ref|ZP_06304517.1| Prolyl-tRNA synthetase [Raphidiopsis brookii D9]
 gi|281198603|gb|EFA73484.1| Prolyl-tRNA synthetase [Raphidiopsis brookii D9]
          Length = 604

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 26/76 (34%), Gaps = 4/76 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  +I   IR      G +    P L+ ++ L K     D   K    
Sbjct: 38  SGVYAYLPLMWRVLQKISQIIREEMNATGAEECLLPQLQPAE-LWKESGRWDTYTKAEGI 96

Query: 70  VFSLQDDDGQWISLRY 85
           +FSL D   Q + L  
Sbjct: 97  MFSLIDRREQHLGLGP 112



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 2/110 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++      DS  +   +     L   GI   +   + +  G + K AD 
Sbjct: 495 IWPVAIAPYHAIISIPNIKDSQQVEIAEKIYTELNKVGIETLLDDRNERA-GVKFKDADL 553

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              P  I+ G    + G +++   A  +     I++  +  E+ ++Q  +
Sbjct: 554 IGIPYRIVTGRS-ITHGKVEVVTRATRESKEIAIEDLVNTLESWISQRAV 602


>gi|227529941|ref|ZP_03959990.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350126|gb|EEJ40417.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 601

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/241 (9%), Positives = 74/241 (30%), Gaps = 5/241 (2%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D + + +     ++     +K +    +  +         + + +    
Sbjct: 356 KILRLIMDVYKDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKKAMDDLNLDYYE 415

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----YDGLVSRFKGQNVPATGF 351
             G   + G   +      + N++    +        R    Y G   +     +   G 
Sbjct: 416 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQDGKEHQPVMIHRGV 475

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R I  L  +             +     ++           + ++ A IR  +  
Sbjct: 476 VGTMERFIAYLTEIYKGAFPTWLAPEQVHIIPVNEDAHGEYADELAKKMKAANIRVVVDH 535

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ +  +  P  ++ G  E++   + ++   + ++         +   A +
Sbjct: 536 -RNEKMGYKIRESQTQKVPYTLVVGDDEKANNGVSVRKYGEKEQNEMSQDAFMNEILADI 594

Query: 472 A 472
           A
Sbjct: 595 A 595



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 59/193 (30%), Gaps = 13/193 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  R + +  G+  + TP+L   D+  K     +     +F
Sbjct: 217 GLPYWMPKGATIRRTIERYIIDREVAD--GYKHVYTPVLMNLDAY-KTSGHWEHYRDDMF 273

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 274 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQRV 333

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                 +  A++  ++ D  +   I    + + + + K +        
Sbjct: 334 REMTLNDGHTFVTLDQIRSEFAKILRLIMDVYKDFDITDYSFRLSLRDPKNVKKYYANDE 393

Query: 184 LHGDDKLNERLIV 196
           +    +   +  +
Sbjct: 394 MWEKSQSMLKKAM 406


>gi|197294184|ref|YP_001798725.1| threonyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|226701405|sp|B1V8W6|SYT_PHYAS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171853511|emb|CAM11353.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 641

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/382 (9%), Positives = 106/382 (27%), Gaps = 18/382 (4%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+ +    +           +   E +      +    ++  V          +  M  
Sbjct: 277 RYIVDK--ELSHQYHHVYTPIMANVELYRTSGHLEHYSQNMFPVMQLENKEKIVLRPMNC 334

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                +  K    +  +  R    G++ +    G     +R+  +   D  +      ++
Sbjct: 335 PHHMMIYKKSPRSYKELPLRIAELGMMHRFEKSGAVSGLQRVREMNLNDAHNFVRPDQIE 394

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
             + +              L   +   +  +      +   +  +        +   N L
Sbjct: 395 EEIKK---------IINLILEVYRDFKITKYEFRLSYRDPQDKEKYFPDDNMWQHAENIL 445

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               + +         I  ++     L+        A+     ++  Q   +        
Sbjct: 446 KKTIQELNLPFR--EAIGDAAFYGPKLDVQVLT---ALGNEETLSTIQLDFLLPQKFDLT 500

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
             D      +   +     S     L   ++  +           +L+  +    + L  
Sbjct: 501 FIDANNKHCRPVVIHRAIVSTLERFLSHLIEENKGVFPLWLAPVQILLIPVSSSVN-LKY 559

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   ++L + G+RAE+    +   G +++ A     P  I+ G  E ++ ++  +   +
Sbjct: 560 TQEIKELLLSQGLRAEINSKEA-TLGYKIREAQELKIPYQIVVGDNEIAKNLITFRKYGQ 618

Query: 453 GKELSREIKNNESWREARVAQI 474
             + +  I+   S     + + 
Sbjct: 619 KNQTTTNIETFISSLNQEIMEK 640



 Score = 44.1 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  +   I +   ++ +  + TP++   +   +     +  ++ +F +
Sbjct: 260 GLPFWLPKGATLRRIVERYIVDKELSHQYHHVYTPIMANVELY-RTSGHLEHYSQNMFPV 318

Query: 74  QD-DDGQWISLRYDLTA 89
              ++ + I LR     
Sbjct: 319 MQLENKEKIVLRPMNCP 335


>gi|41615203|ref|NP_963701.1| glycyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|40068927|gb|AAR39262.1| NEQ417 [Nanoarchaeum equitans Kin4-M]
          Length = 512

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 30/97 (30%), Gaps = 2/97 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                      V +  +    + + K +    ML+       +      + G + +  D 
Sbjct: 409 LKIPKHLAPIKVAVFPLLKKPELIEKAKEVYNMLKNYFYP--IIYDEQGSIGRRYRRVDE 466

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              P AI           + I+D    K++  +I++ 
Sbjct: 467 IGVPYAITIDYQTLEDNTVTIRDRDTMKQVRVKIEDL 503


>gi|32491346|ref|NP_871600.1| prolyl-tRNA synthetase [Wigglesworthia glossinidia endosymbiont of
           Glossina brevipalpis]
 gi|81844435|sp|Q8D1V9|SYP_WIGBR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|25166553|dbj|BAC24743.1| proS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 561

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  +I + IR+     G   I  P+++ S  + K     +  
Sbjct: 31  MIRKLSSGLYAWLPTGFRVLKKIENIIRHEMNKIGAIEILMPIIQPS-LIWKNSGRYEEY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +    D   +   L  
Sbjct: 90  GLELLKFYDRKKKQFVLAP 108


>gi|312112686|ref|YP_003991002.1| glycyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311217787|gb|ADP76391.1| glycyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 460

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/240 (9%), Positives = 67/240 (27%), Gaps = 12/240 (5%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  K      +  K  +       E + + +  ++   + +           
Sbjct: 224 LEFFCKPGEELKWFDYWKQFCKQWLLSLGMKEENIRLRDHTKEELSHYSNATTDIEYKFP 283

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   + +    +              +  +      ++ A   ++    +
Sbjct: 284 FGWGELWGIASRTDYDLKQHMEYSGEDFRYIDQETNERYIPYCIEPSLGADRVTLAF--M 341

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE------MFLG 412
           I A    E      + +  +      + +      +   +  R   I A+      +   
Sbjct: 342 IDAYDEEELEDGTTRTVMRLHPALAPYKAAVFPLSKKLAEGAR--NIFADLSKHFMVDYD 399

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + + G + +  D    P  I         GM+ ++D    +++   I   +S+ E +V 
Sbjct: 400 ETGSIGKRYRRQDEIGTPFCITYDFDSEQDGMVTVRDRDTMEQVRIPISQLKSFLEEKVQ 459


>gi|254804601|ref|YP_003082822.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668143|emb|CBA04768.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 637

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG RAE+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQLVIMNITENQADYCREVAAKLQAAGFRAELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDLDDFIAQLQQEIT-DALVNH 637



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|145224420|ref|YP_001135098.1| threonyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|189083613|sp|A4TD09|SYT_MYCGI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145216906|gb|ABP46310.1| Ser-tRNA(Thr) hydrolase [Mycobacterium gilvum PYR-GCK]
          Length = 695

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/480 (10%), Positives = 103/480 (21%), Gaps = 91/480 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   +R  + +  R  +   G++ + TP +   + L       +    G+F 
Sbjct: 282 SGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFVNTPHI-TKEQLYITSGHLEWYADGMF- 339

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF-RQFIQC 131
                                                        +              
Sbjct: 340 -----------------------------PPMQIDAEYNEDGTVRKPGQDYYLKPMNCPM 370

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                 S   +       +          K    H     R +            + +  
Sbjct: 371 HHLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREEMRDE 430

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN---SGDFTKGANLTS-EQIDIMVSFLSID 247
              ++   +D L  +GL    L L     D    S D  + A  T  E  +     L  D
Sbjct: 431 LARLLQFVLDLLADYGLDDFYLELSTKDPDKFVGSDDLWEEATETLREVAESSGLALVPD 490

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
              +     ++            ++  I                S    R        ++
Sbjct: 491 PGGAAFYGPKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTSSDGTRRRPVLIHRALF 550

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            +I  F  +  +     F                                          
Sbjct: 551 GSIERFFGVLTEHYAGAFPVWLA------------------------------------- 573

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                    PV +  +                LR  GIR E+     +     + + + +
Sbjct: 574 ---------PVQVVGIPVADAHAGYLDGVAAELRRRGIRVEVDASDDRMAKKIVNHTN-Q 623

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKEL-----SREIKNNESWREARVAQITIPISELV 482
             P  ++ G  +   G +  +      ++      + ++    W   R      P +ELV
Sbjct: 624 KVPFMLLAGDKDVEAGAVSFR-FGDRTQINGVPRDQAVEAIVDWVNRRENAT--PTAELV 680


>gi|319637847|ref|ZP_07992613.1| threonyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317401002|gb|EFV81657.1| threonyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 637

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ +          Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLNVDDFIAQLQQEIT-DALVNH 637



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|240850680|ref|YP_002972080.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267803|gb|ACS51391.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 658

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 80/257 (31%), Gaps = 8/257 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNELVVIS 276
           D++  F     L  E + I    LS   +    E+   +          +  ++    I 
Sbjct: 391 DDAHIFCTDEQLADECLSINDLILSTYADFGFKEISLKLSTRPEKRVGSDALWDHAESIM 450

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
           E V K+       +I ++I+ G   + G  +E  L   +  E Q            R+  
Sbjct: 451 ESVLKTIETKFAGQIKTSILPGEGAFYGPKFEYTLKDAIGREWQCGTTQIDFNLPERFGA 510

Query: 337 LVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                  +            G     + +     + +    + P  +      S++    
Sbjct: 511 FYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHMPLWLAPEQVVVATITSEANEYA 570

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           Q  T  LR  G+ A + L  ++    +++    +  P+ ++ G  E     + ++ L   
Sbjct: 571 QKITAKLRAIGLSATIDL-RNEKINYKIREHSLQKVPVILVCGKREAETNSVNMRRLGST 629

Query: 454 KELSREIKNNESWREAR 470
            +    +++        
Sbjct: 630 NKTLLSVEDVIKQLSNE 646


>gi|148988673|ref|ZP_01820106.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147925874|gb|EDK76949.1| threonyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 600

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I N     G+  + TP L   +   K     D   + +F  
Sbjct: 262 GLPFWLPNGATIRRELERYIVNKELASGYQHVYTPPLASVELY-KTSGHWDHYQEDMFPT 320

Query: 74  QDDD-GQWISLRYDLTA 89
            D   G+   LR     
Sbjct: 321 MDMGDGEEFVLRPMNCP 337



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/330 (10%), Positives = 78/330 (23%), Gaps = 20/330 (6%)

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           RY+      +    +     P+   E +         Q D+       +  +  +  M  
Sbjct: 279 RYIV--NKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNC 336

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
                V       +  +  R    G++ +    G     +R+  +   D       + ++
Sbjct: 337 PHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQ 396

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
                       D  +  NLT +    +      D  K                   +E+
Sbjct: 397 EEFQRALQL-IIDVYEDFNLT-DYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEM 454

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +     G  +         ++        +    L F +                 
Sbjct: 455 --GVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDL----------- 501

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y G         +   G    + R    L                +      +   +  
Sbjct: 502 KYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDY 561

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                + LR  G+RA++     +N   Q K
Sbjct: 562 AWEVAKKLRDRGVRADVD---ERNEKMQFK 588


>gi|126697615|ref|YP_001086512.1| prolyl-tRNA synthetase [Clostridium difficile 630]
 gi|255099207|ref|ZP_05328184.1| prolyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255304990|ref|ZP_05349162.1| prolyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|123174666|sp|Q18CD2|SYP1_CLOD6 RecName: Full=Prolyl-tRNA synthetase 1; AltName: Full=Proline--tRNA
           ligase 1; Short=ProRS 1
 gi|115249052|emb|CAJ66863.1| Prolyl-tRNA synthetase [Clostridium difficile]
          Length = 571

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     +R+  +I   IR          I    L  S+ L K        
Sbjct: 31  MIKKMTSGVYNQLPMGLRVFKKIEQIIREELNKKDCQEILCAALLPSE-LWKESGRWTAM 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
            + +F L+D   +   L  
Sbjct: 90  GEEMFRLKDRTEREYCLGP 108


>gi|254973700|ref|ZP_05270172.1| prolyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091090|ref|ZP_05320568.1| prolyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255312745|ref|ZP_05354328.1| prolyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255515506|ref|ZP_05383182.1| prolyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255648598|ref|ZP_05395500.1| prolyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260681818|ref|YP_003213103.1| prolyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685415|ref|YP_003216548.1| prolyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306518722|ref|ZP_07405069.1| prolyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|260207981|emb|CBA60132.1| prolyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260211431|emb|CBE01529.1| prolyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 571

 Score = 51.4 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G  +     +R+  +I   IR          I    L  S+ L K        
Sbjct: 31  MIKKMTSGVYNQLPMGLRVFKKIEQIIREELNKKDCQEILCAALLPSE-LWKESGRWTAM 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
            + +F L+D   +   L  
Sbjct: 90  GEEMFRLKDRTEREYCLGP 108


>gi|326936120|ref|XP_003214106.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like, partial
           [Meleagris gallopavo]
          Length = 550

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 3/106 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR+ Y+  GF  + TP + +S  L +        +  +FS     
Sbjct: 194 FLPRGAHIYNTLIDFIRSEYQARGFSEVVTPNI-FSPRLWELSGHWQHYSAHMFSFT-AG 251

Query: 78  GQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGP 122
            + +SL+           A    +    P R    G + RNE  G 
Sbjct: 252 TETLSLKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRNEPPGS 297



 Score = 43.3 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK---DLAKGK 454
            MLR  G+ A++   +    G +++ A   +    ++ G  E+  G + ++   +   G+
Sbjct: 466 AMLRRDGVMADLDADAGATLGRKIRRAQLTHYNFQLVVGRREQEHGTVSVRTRDNRQLGE 525


>gi|312869026|ref|ZP_07729203.1| proline--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095452|gb|EFQ53719.1| proline--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 578

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 1/85 (1%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M ++     ++  G         R+  +I   +    E  G   +ETP +  +D L K  
Sbjct: 25  MMERAGYIYQISAGVWAYLPLAYRVIRKIHQIMHEEMEKAGAFQMETPSMLPAD-LWKQT 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              +     ++  +D + +   L  
Sbjct: 84  GRYEAYGDTLYKFKDHNDREYILGP 108



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 26/153 (16%)

Query: 345 NVPATGFSIGISRLIVALKSLES------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           ++    + IG++R++ A+    +        ++I      +I       + ++      Q
Sbjct: 438 DMIMGCYGIGVTRMLSAVAEQNADENGLVWPDSIAPFDVHVIPVNAKKDEQMTMANELEQ 497

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L  AG    +     +  G +   +D    PL +  G    + G++++K    G+    
Sbjct: 498 QLTAAGYEVLVDDRKERA-GVKFADSDLIGIPLRVTIGKK-AADGIVEVKIRKTGE---- 551

Query: 459 EIKNNESWREARVAQITIPISELVSTVKKILQE 491
                          + +   ELV+TV  +L++
Sbjct: 552 --------------TLEVKQEELVNTVGILLKQ 570


>gi|294101684|ref|YP_003553542.1| histidyl-tRNA synthetase 2 [Aminobacterium colombiense DSM 12261]
 gi|293616664|gb|ADE56818.1| histidyl-tRNA synthetase 2 [Aminobacterium colombiense DSM 12261]
          Length = 401

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 61/153 (39%), Gaps = 3/153 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            LPRG  +         +R       ++ ++G+ P     L+  +S    LP+     + 
Sbjct: 3   RLPRGCMNVGGALATSMDRSRTHFMKLFSSFGYHPFWPSALQLLESAWPHLPE--NYRRR 60

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           + +L    G+   LR D+T     ++A ++     P R      VF+  +       +  
Sbjct: 61  LIALTTPYGEPSCLRADITLAAVAFLASHYAPEQRPLRLCYADRVFKRAE-KHENRIENF 119

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
           Q   + +G   E AD E+  ++   L+ +G+ +
Sbjct: 120 QVGAELLGWEGEGADTEILWLLLRWLDEIGLDK 152


>gi|91787975|ref|YP_548927.1| threonyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123059945|sp|Q12BR3|SYT_POLSJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91697200|gb|ABE44029.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas sp.
           JS666]
          Length = 635

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 70/258 (27%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R +Y++ G+  ++ P +    +L +     D+    +F+ 
Sbjct: 261 GLVFWHPKGWTIWQGVEQYMRKVYQDNGYQEVKGPQVIDK-TLWEKTGHWDKYRDNMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKREYALKPMNCPG-------HILIFKQGIKSYRDLPLRYGEFGQCHRNEPSGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +       L+              +    + I +          ++ 
Sbjct: 372 IMRVRGFTQDDGHIFCTEEQILKECVDYTTLLQKVYTDFGFKNIIYKVATRPDARIGSDE 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                + DK ++  ++ ++    E           G  +     D +         +   
Sbjct: 432 -----SWDKAEQALIESLRASGCEFEISPGEGAFYGPKIEYTLKDAIGRQWQCGTMQVDF 486

Query: 254 ELYELVKGTIAGEKGFNE 271
            + E +     GE G   
Sbjct: 487 SMPERLDAEYVGEDGARH 504


>gi|118580723|ref|YP_901973.1| threonyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166225474|sp|A1ARE5|SYT_PELPD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118503433|gb|ABK99915.1| Ser-tRNA(Thr) hydrolase [Pelobacter propionicus DSM 2379]
          Length = 636

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 3/74 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLA 432
            + PV    +    + +   Q   + LR AGIR +    + K +F   ++ A  +  P  
Sbjct: 536 WLSPVQAMLVTVTDNHIPYAQGVLEHLREAGIRVQGDFRNEKLSFK--IREAQLQKVPYM 593

Query: 433 IIQGTGERSRGMLQ 446
           ++ G  E     + 
Sbjct: 594 LVIGDKEMESATVT 607


>gi|253581047|ref|ZP_04858308.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847710|gb|EES75679.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 479

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 23/130 (17%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR-- 426
              I  +  V+I         L K       L+ AG+R ++   + K+ G   K+A++  
Sbjct: 286 PPRIAPVQAVIIPIQQRKEGVLEKADEMFAALKAAGVRVKVD-DTDKSPG--FKFAEQEM 342

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           R  P+ I  G  +   G   I      ++                   T+   ELV  V+
Sbjct: 343 RGIPIRIECGPKDIENGQAVICRRDTREK------------------YTVTFDELVEKVQ 384

Query: 487 KILQENKEEI 496
           +IL+  ++++
Sbjct: 385 EILETIQKDM 394


>gi|149926877|ref|ZP_01915136.1| threonyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824429|gb|EDM83647.1| threonyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 635

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 59/198 (29%), Gaps = 11/198 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +  ++   +R +Y + G+  I  P +     L +     D  
Sbjct: 255 MQDEAP-GLVFWHPKGWALWQQVEQYMRKVYVDGGYQEIRCPQI-LDRKLWEKSGHWDNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+  + + +  +L+                 +             R  + G     
Sbjct: 313 KENMFT-TESEKRDYALKPMNCPG--------HIEVFKSDLRSYRDLPMRYGEFGACHRN 363

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +        +     T D        D ++    K N   + +      + I  K+ L  
Sbjct: 364 ESSGALHGIMRVRGFTQDDGHIFCTEDQVQEEVTKFNQVAMQVYADFGFNEINVKLALRP 423

Query: 187 DDKLNERLIVLRAIDKLD 204
           + +L       +A D L 
Sbjct: 424 EARLGTDETWDKAEDSLR 441



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +                 QML+  GIR E  L  ++    +++    +  P   
Sbjct: 535 WLSPVQVVVATITEAHNEYAHNVVQMLKKQGIRVEADL-RNEKINRKIREHTMQKTPYIA 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  ER    + ++
Sbjct: 594 VIGDAERDANQVAVR 608


>gi|260219598|emb|CBA26443.1| Threonyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 665

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/258 (11%), Positives = 69/258 (26%), Gaps = 14/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y++ G+  ++ P +    SL +     D+  + +F+ 
Sbjct: 290 GTVFWHPKGWTLWQGVEQYMRKVYQDNGYLEVKGPQIIDK-SLWEKTGHWDKYRENMFT- 347

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 348 TESEKRDYALKPMNCPG-------HILIYKQGIKSYRDLPLRFGEFGQCHRNEPSGGLHG 400

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +    D  +        + V            +    + I +           E 
Sbjct: 401 IMRVRAFTQDDGHIFCTEDQIQDEVKAFTTLLQKVYKDFGFTNIIYKLSTRPEKRIGTEE 460

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  D+ +    +G++    +           G  +     D +         +   
Sbjct: 461 G-----WDRAENALAEGLRASGCDFEYLPGEGAFYGPKIEYTLKDALGRPWQCGTIQVDP 515

Query: 254 ELYELVKGTIAGEKGFNE 271
            L E +     GE G   
Sbjct: 516 NLPERLDAEFVGEDGSRH 533


>gi|225076640|ref|ZP_03719839.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens
           NRL30031/H210]
 gi|224952046|gb|EEG33255.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens
           NRL30031/H210]
          Length = 643

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 541 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ +          Q  I    LV+ 
Sbjct: 600 VVGDKEKQENKVAVR------RKAEDLGSLNVDDFIAQLQQEIT-DALVNH 643



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 267 GMVFWHPKGWALWQVIEQHMRKELNVAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 324

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 325 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 376


>gi|71394075|gb|AAZ32114.1| prolyl-tRNA synthetase [uncultured euryarchaeote Alv-FOS5]
          Length = 472

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 13/118 (11%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V I     ++  + K     + L     R E+   S  N G++  Y + R  P+ I  G 
Sbjct: 289 VPILYKGKENQVMEKAMEVYEKL-KYNWRVELD-DSDSNPGDKFYYWELRGVPIRIEIGP 346

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
            +   G++ +      ++   +++  E             I+ L   +   + +   +
Sbjct: 347 RDVENGVVTLARRDTKEKTQVKMEELED-----------KINRLAEEIHNNIAKRARD 393



 Score = 44.1 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +IR  + D +R + E  G   +  P L    +L K           V
Sbjct: 27  PVKGMLVWRPNGFKIRKYVTDLLRELLEETGHQEVLFPTLIPETALNKEGEHIRGFGSEV 86

Query: 71  FSLQDDDGQW-----ISLRY 85
           +      G+      ++LR 
Sbjct: 87  Y-WITHGGETPLDVKLALRP 105


>gi|317055716|ref|YP_004104183.1| glycyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447985|gb|ADU21549.1| glycyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 461

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/231 (5%), Positives = 46/231 (19%), Gaps = 11/231 (4%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +         K  +       E + + +   +     ++       +    +        
Sbjct: 233 EWFDYWRSFCKNFLLSLNIKEENLRLRDHSAEELCFYSKATTDFEYLFPFGWGELWGVAD 292

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +                   +  +      ++      + I       + + +  
Sbjct: 293 RTDYDLTQHINTSGKSLDYFDPETNERYIPYVIEPSLGVERLFLTIVTEAYDEEDIGTPE 352

Query: 370 NNIKEMGPVLI--------TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                                +                L             + + G + 
Sbjct: 353 KPDVRTVMHFHPALAPFKACVLPLSKKLAEPAGELYDTL-AKNFSV--DYDETGSIGKRY 409

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  D    P  I         G + ++D    ++   +I     +   ++A
Sbjct: 410 RRQDEIGTPFCITYDFDSAEDGCVTVRDRDSMEQERVKIDELVEYINKKIA 460


>gi|295400623|ref|ZP_06810600.1| glycyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977204|gb|EFG52805.1| glycyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 460

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/240 (9%), Positives = 67/240 (27%), Gaps = 12/240 (5%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  K      +  K  +       E + + +  ++   + +           
Sbjct: 224 LEFFCKPGEELKWFDYWKQFCKQWLLSLGMKEENIRLRDHTKEELSHYSNATTDIEYKFP 283

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   + +    +              +  +      ++ A   ++    +
Sbjct: 284 FGWGELWGIASRTDYDLKQHMEYSGEDFRYIDQETNERYIPYCIEPSLGADRVTLAF--M 341

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE------MFLG 412
           I A    E      + +  +      + +      +   +  R   I A+      +   
Sbjct: 342 IDAYDEEELEDGTTRTVMRLHPALAPYKAAVFPLSKKLAEGAR--NIFADLSKHFMVDYD 399

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + + G + +  D    P  I         GM+ ++D    +++   I   +S+ E +V 
Sbjct: 400 ETGSIGKRYRRQDEIGTPFCITYDFDSEQDGMVTVRDRDTMEQVRIPISQLKSFLEEKVQ 459


>gi|291546836|emb|CBL19944.1| glycyl-tRNA synthetase, dimeric type [Ruminococcus sp. SR1/5]
          Length = 464

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/229 (7%), Positives = 61/229 (26%), Gaps = 10/229 (4%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     ++     ++ V   +  ++     ++       +    +        
Sbjct: 237 EWFAYWKKFCLDWLSALGLKDDEVRYRDHDKEELSFYSKATTDVEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI---VALKSLE 366
              + +   +       +     +    +      ++ A    +           L + +
Sbjct: 297 RTDYDLTQHQNVSGQDLTYFDDEKKQKYIPYVIEPSLGADRMVLAFLCSAYDEEVLDAEK 356

Query: 367 SS----TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +      +    + PV I  +          +   Q L +     E       N G + +
Sbjct: 357 NDVRTVLHFHPVLAPVKIGVLPLSKKLNEGAEKIYQQL-SKKYNCE--YDDRGNIGKRYR 413

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             D    P  I       + G + ++D    +++  +I   +++   + 
Sbjct: 414 RQDEIGTPFCITYDFESENDGAVTVRDRDTMEQVRVKIDELDAYFADKF 462


>gi|256788869|ref|ZP_05527300.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 653

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/390 (12%), Positives = 94/390 (24%), Gaps = 24/390 (6%)

Query: 90  PLARYVAE---NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
            + R V E                     + +         +    +       E  D  
Sbjct: 283 GIIRRVMEDYSRRRHEEEGYEFVYTPHATKGKLFETSGHLDWYADGMYPPMQLDEGVDYY 342

Query: 147 MCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKF 206
           +  M       +   R   +  +  R    G + +    G      R       D     
Sbjct: 343 LKPMNCPMHNLIFDARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYC 402

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
             + +   L     D +  F           D  +   + D EK +       + T    
Sbjct: 403 TREQMSEEL-----DKTLTFVLNLLRDYGLNDFYLELSTKDPEKFVGSDEAWEEATETLR 457

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
           +         ELV   G  +      S   R     T  +    L F +           
Sbjct: 458 QVAE--KQNLELVADPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFSL----- 510

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
                  Y           +        I R    L    +       + PV    +   
Sbjct: 511 ------EYTAADGAKTRPVMIHRALFGSIERFFAVLLEHYAGAMP-PWLAPVQAVGIPVG 563

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              +   + +    R  G+R ++   S +    +++   ++  P  II G  +   G + 
Sbjct: 564 DAHVQYLEEFAAEARRKGLRVDVDASSDR-MQKKIRTQQKQKVPFMIIVGDEDMHGGTVS 622

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITI 476
            +    G + +   ++    +   V +  I
Sbjct: 623 FRY-RDGSQENGIPRDQALAKLVDVVERRI 651


>gi|241955201|ref|XP_002420321.1| threonyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
 gi|223643663|emb|CAX41396.1| threonyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
          Length = 706

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D++R  Y   G++ + TP + YS  L +         + +FS + + 
Sbjct: 324 WLPHGARIYNTLVDTLRTEYRKRGYEEVITPNM-YSTKLWETSGHWQNYKENMFSFEVEK 382

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 383 -ETFGLKPMNCPG 394


>gi|77919019|ref|YP_356834.1| threonyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|123770467|sp|Q3A4P3|SYT_PELCD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77545102|gb|ABA88664.1| Ser-tRNA(Thr) hydrolase [Pelobacter carbinolicus DSM 2380]
          Length = 638

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    ++   +     +  +  LR AG+R +  L  ++  G +++ A     P  +
Sbjct: 538 WLAPVQAVVINVTDNQADYAKSVSDALRAAGVRVQCDL-RNEKLGFKIREAQVDKIPYML 596

Query: 434 IQGTGERSRGML 445
           + G  E S G +
Sbjct: 597 VVGDTEMSDGTV 608



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   +R  + D  R  +   G+D +  P +  +D L K     D   + ++   D D
Sbjct: 269 WHPKGALLRTLLEDFERREHLRRGYDIVMGPQILRTD-LWKTSGHFDNYRENMY-FTDVD 326

Query: 78  GQWISLRY 85
           GQ   ++ 
Sbjct: 327 GQGYGIKP 334


>gi|84489844|ref|YP_448076.1| glycyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84373163|gb|ABC57433.1| GlyS [Methanosphaera stadtmanae DSM 3091]
          Length = 580

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 2/71 (2%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     LR++ I        S   G +   AD    P AI           + I++   
Sbjct: 493 AEDIETTLRSSNIIT--SFDGSGTIGRRYARADEIGIPYAITIDYDTVDDKKVTIRNRDT 550

Query: 453 GKELSREIKNN 463
            K+   EI+  
Sbjct: 551 FKQKRVEIEKL 561



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENY-GFDPIETPLLEYSDSLGKFL 60
          GF D       ++N I++  R  Y +  GF  IE P +   ++L    
Sbjct: 28 GFYDYGPLGGVLKNNIMNLWRKYYVSNEGFYEIEAPTIMPRETLKASG 75


>gi|27262218|gb|AAN87390.1| Threonyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 311

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +       +  Q     L   GIRAE+    ++  G +++    +  P  +
Sbjct: 204 WLAPVQVRVLPITDRHHAYAQKVLAHLAERGIRAEVD-DRNEKIGYKIREGQVKKIPYLL 262

Query: 434 IQGTGERSRGMLQIK 448
           + G  E   G + ++
Sbjct: 263 VVGDKEAENGAVAVR 277


>gi|58699832|ref|ZP_00374451.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533650|gb|EAL58030.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 236

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/129 (10%), Positives = 45/129 (34%), Gaps = 3/129 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            +     +           + + +++             + I T+ +++D        + 
Sbjct: 104 HKHHPVMLHRAILGTFERFIGILIENYAGKFPVWLAPTQLAILTITNEAD--GYATKISN 161

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
           +L+  G+R +  L + K    +++       P+  I G  E +   + +++L   ++ S 
Sbjct: 162 VLKEQGVRVKTDLTNEK-ISYKIRLHSLNKVPILWIVGKNEVTSKTVSVRNLGSERQESF 220

Query: 459 EIKNNESWR 467
            ++      
Sbjct: 221 SLEKAIELL 229


>gi|331082613|ref|ZP_08331736.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330400232|gb|EGG79874.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 658

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 4/160 (2%)

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                   ++D       G           S+G     +A    + +      + P  + 
Sbjct: 491 QWDALLAEQFDMYYIDENGDKKRPYIIHRTSMGCYERTLAWLIEKYAGLFPTWLCPEQVR 550

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +              + L+  GIR+ +    S+  G +++ A     P  ++ G  E  
Sbjct: 551 VLPISEKYGDYANEVQKQLKANGIRSSVD-NRSEKIGYKIREARLEKVPYMLVVGAKEEE 609

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             ++ ++    G E  + +          +    I   E+
Sbjct: 610 DKVVSVRSRYLGDEGQKTLSEFIDAICKEIRTKEIRKIEI 649



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 5/116 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K + +   +   I ++ +N +G+   +TPL+  +D   K     D   +G+F 
Sbjct: 260 GLPLLMPKGVIMLKELQRWIEDLEDNEWGYVRTKTPLMAKNDLY-KISGHWDHYKEGMFV 318

Query: 73  LQD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           L D   D +  +LR  +T P   YV +                         G   
Sbjct: 319 LGDEEKDKEVFALRP-MTCPFQYYVYKANQHSYRELPIRYGETSTLFRNEDSGEMH 373


>gi|269213639|ref|ZP_05982445.2| threonine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145722|gb|EEZ72140.1| threonine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 643

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 541 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ +          Q  I    LV+ 
Sbjct: 600 VVGDKEKQENKVAVR------RKAEDLGSLNVDDFIAQLQQEIT-DALVNH 643



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 267 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 324

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 325 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 376


>gi|241957631|ref|XP_002421535.1| proline--trna ligase, putative; prolyl-tRNA synthetase, putative
           [Candida dubliniensis CD36]
 gi|223644879|emb|CAX40877.1| proline--trna ligase, putative [Candida dubliniensis CD36]
          Length = 688

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 3/101 (2%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   Q LR  GIR         N G +    + +  PL    G  + +   + I     
Sbjct: 499 AEKIEQSLRANGIRVTGDYREIYNPGWKFADWELKGVPLRFEFGPKDLAGNQVTIVRRND 558

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           GK+ + ++   ++     + Q+     +L++  K+   E++
Sbjct: 559 GKKYTVKLDELDTQVPKLLDQMH---DDLLAKAKQEFDEHR 596


>gi|161760548|ref|NP_907033.2| threonyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
          Length = 602

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 41/98 (41%), Gaps = 1/98 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +    + L   +     L+  G+ AE+    ++    +++  +++  P+ ++ G
Sbjct: 504 PTPVAIVPIGEEQLEYAKHLRLELQKVGVYAEIH-DKNETLNKKIRTVEKQRVPMIVVLG 562

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             E +   + I+D  + ++            + +++++
Sbjct: 563 EREVNEKKVAIRDRREKRQYELGEAEFIQLAKEKMSEV 600



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R R+   +   +    ++P+  P +  SD L K         + ++  
Sbjct: 228 GLPIWLPAGARLRRRLEAMLTEAHIRRNYEPVRGPEILKSD-LWKISGHYQNYKENMY-F 285

Query: 74  QDDDGQWISLRYDLTAP 90
              D     ++      
Sbjct: 286 TKIDEVEYGIKPMNCVG 302


>gi|332295560|ref|YP_004437483.1| Prolyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178663|gb|AEE14352.1| Prolyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 572

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 1/108 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              N+I     ++I T  +D + L+  +M    L+  GI         +  G + K AD 
Sbjct: 465 IWPNSISPYQVIIIPTNINDKNQLTTSEMIFYELKERGISVLFDDRDERA-GVKFKDADL 523

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P+ II G+     G+++IK    G            +   ++ QI
Sbjct: 524 LGIPIKIIIGSHFSKSGLVEIKVRRDGSSNLVPPDEASVYVSLKLRQI 571



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+  +I + +R    N     +  P L+  +   +      +    +  
Sbjct: 37  SGIYTYLPLAKRVLLKIENIVREEMININSQELLLPALQPREI-WEISGRWKKYGLELMR 95

Query: 73  LQDDDGQWISLRY 85
            +D   +  +L  
Sbjct: 96  FKDRHDKDYALGP 108


>gi|254421628|ref|ZP_05035346.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196189117|gb|EDX84081.1| prolyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 597

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +  G         R+ +++   +R      G      P L+ + SL K     D   K 
Sbjct: 29  RIASGLYAYLPLLQRVLDKVSAIVREEMNATGAQECLLPQLQPA-SLWKESGRWDTYTKA 87

Query: 70  ---VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +FSL D   Q ++L     ++   +AR +  ++  +       +  
Sbjct: 88  EGIMFSLGDRRDQELALGPTHEEVITAIARDMIRSYKQLPLHLYQIQTK 136



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 34/96 (35%), Gaps = 2/96 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +++     D D ++  +     L +AG+   +     +  G + K A+ 
Sbjct: 489 IWPVAIAPYHAIVVVPNIGDDDQMAAAKQLYDDLNSAGVETLLDDRKERA-GVKFKDAEL 547

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
              P  ++ G     +G +++   A G+     +  
Sbjct: 548 VGIPFRVVTGRS-LKQGKVEVAKRANGEVEEIALDE 582


>gi|126172877|ref|YP_001049026.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS155]
 gi|125996082|gb|ABN60157.1| tRNA synthetase, class II (G, H, P and S) [Shewanella baltica
          OS155]
          Length = 403

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 9  AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
           + P G          +   I + +R +Y   GF+ + TP+    + L +     D   +
Sbjct: 18 PQAP-GMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKKE-LWQTSGHMDMFAE 75

Query: 69 GVF 71
           +F
Sbjct: 76 NMF 78



 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 33/107 (30%), Gaps = 1/107 (0%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +     +  +    +    +     IR  + +  + +   ++K   ++  P  +
Sbjct: 298 WLHPVPVAIASVNESNSQFVRQLATLCLARDIRVLVDISQN-SVARKMKRFHKQKVPYIL 356

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G  E +   + +K    G      +     +   ++        +
Sbjct: 357 TVGDKEEAENRVSVKCRKDGVITHVPLAELADYLADKLEGKLKRKED 403


>gi|262374306|ref|ZP_06067582.1| threonyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310864|gb|EEY91952.1| threonyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 640

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/364 (12%), Positives = 88/364 (24%), Gaps = 20/364 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 264 FWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAENMFTTHSES 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 324 RNYAVKPMNCPCHVQVFNQGLKSY-RDLPIRLAEFGSCHRNEPSGSLHGIMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +   L +  +    E+   +        G + L  ++E 
Sbjct: 379 TQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDLAEK 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                 +   +        G  Y     +        +    +                 
Sbjct: 439 SLADALDDAGLAWDLQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPIRLDAS 495

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +      +          R I  L    +       + PV    M+         
Sbjct: 496 YVTEENERDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLAPVQACVMNITDSQAEAS 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----K 448
           +     L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K
Sbjct: 555 EQVVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613

Query: 449 DLAK 452
           +L  
Sbjct: 614 NLGT 617



 Score = 40.2 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 AENMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|145589014|ref|YP_001155611.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189083617|sp|A4SX33|SYT_POLSQ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145047420|gb|ABP34047.1| Ser-tRNA(Thr) hydrolase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 640

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R +Y+N G+  ++ P +     L +     D   + +F+ 
Sbjct: 261 GLIFWHPKGWSIWQEVEQYMRRVYQNEGYQEVKAPQI-LDRGLWEKSGHWDNYKENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + + +  +L+        +       +    P R    G   RNE  G   
Sbjct: 319 TESENRAYALKPMNCPGHVQIYNSGLHSYRELPLRFGEFGQCHRNEPSGALH 370



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++   +S +  Q   Q L+  G R E  L + K      ++A  +  P  ++ G  E 
Sbjct: 542 VVLNISGNSAAYAQKVQQSLKKQGFRVESDLRNEKITYKIREHA-LQKIPFLLVVGDKES 600

Query: 441 SRGMLQIK 448
               + ++
Sbjct: 601 ESNTVAVR 608


>gi|68487989|ref|XP_712153.1| hypothetical protein CaO19.6701 [Candida albicans SC5314]
 gi|68488040|ref|XP_712128.1| hypothetical protein CaO19.13993 [Candida albicans SC5314]
 gi|77023056|ref|XP_888972.1| hypothetical protein CaO19_6701 [Candida albicans SC5314]
 gi|46433496|gb|EAK92934.1| hypothetical protein CaO19.13993 [Candida albicans SC5314]
 gi|46433523|gb|EAK92960.1| hypothetical protein CaO19.6701 [Candida albicans SC5314]
 gi|76573785|dbj|BAE44869.1| hypothetical protein [Candida albicans]
          Length = 691

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 3/101 (2%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   Q LR  GIR         N G +    + +  PL    G  + +   + I     
Sbjct: 502 AEKIEQSLRANGIRVTGDYREIYNPGWKFADWELKGVPLRFEFGPKDLAGNQVTIVRRND 561

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           GK+ + ++   ++     + Q+     +L++  K+   E++
Sbjct: 562 GKKYTVKLDELDTEVPKLLDQMH---DDLLTKAKQEFDEHR 599


>gi|299140628|ref|ZP_07033766.1| threonine--tRNA ligase [Prevotella oris C735]
 gi|298577594|gb|EFI49462.1| threonine--tRNA ligase [Prevotella oris C735]
          Length = 649

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 48/133 (36%), Gaps = 3/133 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +          +  ++   + G+R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYAKQVSKYFDSVGVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A +    ++  G +++  + +  P  +I G  E + G++ ++    G++ + +++   + 
Sbjct: 578 AVID-DRNEKIGRKIRDNELKRIPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMEEFANR 636

Query: 467 REARVAQITIPIS 479
             A VA +   + 
Sbjct: 637 INAEVADMLKTLD 649


>gi|281423114|ref|ZP_06254027.1| threonine--tRNA ligase [Prevotella oris F0302]
 gi|281402450|gb|EFB33281.1| threonine--tRNA ligase [Prevotella oris F0302]
          Length = 649

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 48/133 (36%), Gaps = 3/133 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +          +  ++   + G+R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYAKQVSKYFDSVGVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A +    ++  G +++  + +  P  +I G  E + G++ ++    G++ + +++   + 
Sbjct: 578 AVID-DRNEKIGRKIRDNELKRIPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMEEFANR 636

Query: 467 REARVAQITIPIS 479
             A VA +   + 
Sbjct: 637 INAEVADMLKTLD 649


>gi|194223978|ref|XP_001498225.2| PREDICTED: threonyl-tRNA synthetase [Equus caballus]
          Length = 722

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 4/123 (3%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   Q    A    ++ L     
Sbjct: 597 ERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMVDVDLDPGCT 656

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK---GKEL-SREIKNNESWREARVA 472
              +++ A        ++ G  E++ G + I+       G+   S  I+  +  +++R  
Sbjct: 657 LNKKIRNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTLSETIERLQQLKQSRSK 716

Query: 473 QIT 475
           Q  
Sbjct: 717 QAE 719



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + Y+  L          ++ +FS + + 
Sbjct: 344 FLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNI-YNSRLWMTSGHWQHYSENMFSFEVEK 402

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 403 -ELFALKPMNCPG 414


>gi|159039093|ref|YP_001538346.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|189083509|sp|A8LYE7|SYP_SALAI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157917928|gb|ABV99355.1| prolyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 584

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 37/160 (23%), Gaps = 8/160 (5%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNN 371
           E       G          ++        P  G         VA+               
Sbjct: 424 EIGHIFQLGRRYTDAFTVDVLGPEGQSVRPTMGCYGIGVSRAVAVIAEQHHDERGLVWPT 483

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V +         +         L  AG+R  +      + G +   A+    P 
Sbjct: 484 EVAPCDVHLVAAGRGPQ-VETALGLGNRLAEAGLRVLVDDRGHVSAGVKFTDAELVGIPR 542

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            ++ G    + G  +++D   GK     +          V
Sbjct: 543 TVVVGRR-LADGYAEVRDRPSGKRADVRVDALVEHLVNEV 581


>gi|150399970|ref|YP_001323737.1| glycyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166227937|sp|A6URK3|SYG_METVS RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|150012673|gb|ABR55125.1| glycyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 574

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 31/116 (26%), Gaps = 20/116 (17%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  + +        +      R  GI AE     S   G +    D    P  +
Sbjct: 479 SPVKVGVFPLVNKEGMDEIAENLKNKFRKNGIIAE--YDDSGAIGRRYMRMDEIGTPFCV 536

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
                      + I++    ++                    IP+  +V  +K+ L
Sbjct: 537 TVDGETLKDNTVTIRERDSREQ------------------FRIPLDGVVDYIKEKL 574



 Score = 39.8 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
          GF D       +++ ++++ R  Y  N GF  I++P +   + L    
Sbjct: 29 GFFDYGPLGAILKSSVINTWRKHYIINEGFYEIDSPTVNPYEVLKASG 76


>gi|40063567|gb|AAR38356.1| prolyl-tRNA synthetase [uncultured marine bacterium 582]
          Length = 445

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I D +    +  G  P+  P ++ +D L +     D  
Sbjct: 31  MIKQSSAGIYSWLPMGFKVLKKIEDIVHEEQQRAGHMPMLMPTIQSAD-LWRESGRYDAF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   + +       +L   + R    ++  +       +  
Sbjct: 90  GDEMLRIKDRHDRDMLFTPTAEELITDIFRAHVGSYKDLPLTLYQIQWK 138


>gi|328955410|ref|YP_004372743.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Coriobacterium
           glomerans PW2]
 gi|328455734|gb|AEB06928.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Coriobacterium
           glomerans PW2]
          Length = 643

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 1/96 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +      L       +++  AG RAE+   +      ++  A+ +  P  +
Sbjct: 546 WLAPVQCAIIPIADRHLDYACEIKRLIEAAGGRAEVAEHNEP-MRAKIARAEAKKVPYML 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           + G  E +   + +++ ++G   S  I    S  EA
Sbjct: 605 VVGDKEAAARTVSVREHSEGDRGSMPIDEFLSIIEA 640



 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 19/65 (29%), Gaps = 1/65 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+   +   +       G+  + TP +  SD   K           ++  
Sbjct: 265 GLPLYLPAGARVIRLMETWLSRELYRRGYQEVITPHIYKSDV-WKTSGHYGYYRDNMYFF 323

Query: 74  QDDDG 78
             ++G
Sbjct: 324 NINEG 328


>gi|330802268|ref|XP_003289141.1| hypothetical protein DICPUDRAFT_35169 [Dictyostelium purpureum]
 gi|325080808|gb|EGC34348.1| hypothetical protein DICPUDRAFT_35169 [Dictyostelium purpureum]
          Length = 679

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ-DD 76
                 +I N++L+ +R+ Y   G+  + TP + YS  L +           +FS + D 
Sbjct: 297 FLPHGTKIYNKLLNFLRSEYRRRGYQEVITPNI-YSQKLWEQSGHWQNYKDNMFSFECDH 355

Query: 77  DGQWISLRYDLTAPLARYVAENFDTI 102
                SL+           A    + 
Sbjct: 356 --THYSLKPMNCPGHCLMFAHRQRSY 379


>gi|13508292|ref|NP_110242.1| threonyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501059|sp|P75225|SYT_MYCPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|1673960|gb|AAB95937.1| threonyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|301633413|gb|ADK86967.1| threonine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 564

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/346 (11%), Positives = 91/346 (26%), Gaps = 19/346 (5%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           ++  ++F  +T     +   E +           D+               M        
Sbjct: 207 HYQQLMFGFKTVSSPVLANLELYKISGHYVHYSEDMFPSVKLENQMMMLRPMTCPH-HCL 265

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
           +   +   +  +  R   D IL +    G     ER+  +  +D         +K  +  
Sbjct: 266 IFKHKRRSYKELPQRFCEDSILHRFEASGGLTGLERVRCMTLLDNHIFCRTDQIKAEIKN 325

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG-FNELVVIS 276
                          + ++ID  ++    + +    +  +L   + +  +  F EL V  
Sbjct: 326 AFKL-IQTVNNKFGFSFDRID--LALHDPNNKAKFIDNDQLWANSESQIESVFKELNVPY 382

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
           ++   +                 +  T    +     P   E               +D 
Sbjct: 383 KIDVGAAAFYGPKIDFQFKTALNKMITIATIQLDFLLPERFEL------------RYFDE 430

Query: 337 LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
             +      +           +   L+    +         V++  ++ D       +  
Sbjct: 431 QSNAQTPVIIHVGIVGTYERFIAALLEKTHGNLPLWMAPVQVVVIPVNID-KHEKAAKKL 489

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
            Q L    IR  +     +  G +++ A     PL II G  E   
Sbjct: 490 YQKLLKENIRVSLDESEDR-LGKKVRTAIVNKIPLQIIVGDKEMQD 534


>gi|320160257|ref|YP_004173481.1| putative prolyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994110|dbj|BAJ62881.1| putative prolyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 545

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/125 (8%), Positives = 38/125 (30%), Gaps = 2/125 (1%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEM 409
                    +   +             V +  +    + ++       + L    +   +
Sbjct: 421 TRTFACLAELRHDNYGLILPPQASPFEVHLVVLPGKENGVASALPEVLKQLEQMNLDVLV 480

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               S++ G +   AD    P+ +        +G ++++   + +  +  +++   W   
Sbjct: 481 D-DRSESPGVKFNDADLIGVPVRLTLSERSLQQGGIEVRKRWESERQTIPLEDLSDWIRK 539

Query: 470 RVAQI 474
            ++Q 
Sbjct: 540 SLSQR 544


>gi|260589197|ref|ZP_05855110.1| threonine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540278|gb|EEX20847.1| threonine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 658

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 4/160 (2%)

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                   ++D       G           S+G     +A    + +      + P  + 
Sbjct: 491 QWDALLAEQFDMYYIDENGDKKRPYIIHRTSMGCYERTLAWLIEKYAGLFPTWLCPEQVR 550

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +              + L+  GIR+ +    S+  G +++ A     P  ++ G  E  
Sbjct: 551 VLPISEKYGDYANEVQKQLKANGIRSSVD-NRSEKIGYKIREARLEKVPYMLVVGAKEEE 609

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             ++ ++    G E  + +          +    I   E+
Sbjct: 610 DKVVSVRSRYLGDEGQKTLSEFIDAICKEIRTKEIRKIEI 649



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 5/116 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYEN-YGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K + +   +   I ++ +N +G+   +TPL+  +D   K     D   +G+F 
Sbjct: 260 GLPLLMPKGVIMLKELQRWIEDLEDNEWGYVRTKTPLMAKNDLY-KISGHWDHYKEGMFV 318

Query: 73  LQD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           L D   D +  +LR  +T P   YV +                         G   
Sbjct: 319 LGDEEKDKEVFALRP-MTCPFQYYVYKANQHSYRELPIRYGETSTLFRNEDSGEMH 373


>gi|254463517|ref|ZP_05076933.1| prolyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206680106|gb|EDZ44593.1| prolyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 445

 Score = 51.4 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I + +    +  G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQSSAGIYSWLPMGFKVLRKIENIVHEEQQRAGHIPMLMPTLQSAD-LWRKSGRYDAY 89

Query: 67  NKGVFSLQDDDGQWI 81
              +  ++D   + +
Sbjct: 90  GPEMLRIKDRHDREM 104


>gi|220929210|ref|YP_002506119.1| glycyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|254781875|sp|B8I2Z6|SYG_CLOCE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|219999538|gb|ACL76139.1| glycyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 462

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/232 (9%), Positives = 54/232 (23%), Gaps = 11/232 (4%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +        +  L    +     +    EL         +                   
Sbjct: 240 KYWKDFCYNWLLSLNMKKENLKLRDHEKEELSHY-----SNATTDIEFLFPFGWGELWGI 294

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                ++  L   + + K     F            +    G +     F          
Sbjct: 295 ADRTDFD--LKQHMTHSKDDLSYFDPTTNEKYVPYCIEPSLGADRVTLAFLCEAYDEEEV 352

Query: 362 LK-SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +  + +       + PV I  +              QML       E     + + G +
Sbjct: 353 AEGDVRTVLRFHPALAPVKIAVLPLSKKLGEDADKVYQML-AKSYYCE--YDETGSIGKR 409

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +  D    P  I           + I+D    +++  +I++  ++ E +  
Sbjct: 410 YRRQDEIGTPYCITFDFDSLEDKSVTIRDRDTMQQVRIKIEDLAAYFENKFE 461


>gi|58039289|ref|YP_191253.1| threonyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|73919795|sp|Q5FSP9|SYT_GLUOX RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58001703|gb|AAW60597.1| Threonyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 645

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/261 (10%), Positives = 68/261 (26%), Gaps = 6/261 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E    +     +  +                  G +E+   +E   
Sbjct: 384 DDAHIFCTDDQIADETAKFVKMLAEVYSDLGFDTFRVKFSDRPETRAGSDEVWDRAEGSL 443

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           K       ++       G  Y     +  +      + +   +    V         +  
Sbjct: 444 KKACEIAGVEYEYNPGEGAFYGPKLEF-VLTDAIGRDWQCGTLQVDYVLPERLDASYIGE 502

Query: 341 FKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
              ++ P            R I  L    +    +  + P  +      SD+        
Sbjct: 503 DSNRHRPVMLHRAILGSFERFIGILIEQYAGKFPLW-LAPTQVVVASIVSDAADYANEVA 561

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+ AG++ E    S K    +++       P+ ++ G  E     + ++ L    +  
Sbjct: 562 ATLKAAGLQVETDTRSDK-INAKIREHSLARVPVILVVGRREAEERKVAMRRLGGAAQEI 620

Query: 458 REIKNNESWREARVAQITIPI 478
             + +  +          I  
Sbjct: 621 LSLDDAVAALAKEAQAPDIAR 641



 Score = 36.7 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 17/151 (11%), Positives = 45/151 (29%), Gaps = 6/151 (3%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF--SLQDDDGQWISLRYD 86
           + D +R   E   ++ + TP L    +L +     D+  + +F  +++D+D + ++L+  
Sbjct: 277 LQDYMRRAQERNNYEEVRTPQLVDR-ALWEASGHWDKYRENMFIATVEDED-KTLALKPM 334

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGP-VFRNEKHGPGRFRQFIQCDVDNVGSSAETADA 145
                 +    +                     +                  +     D 
Sbjct: 335 NCPCHVQIF-RHGLRSYRELPLRMAEFGACHRYEPSGALHGIMRVRGFTQDDAHIFCTDD 393

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
           ++    A  ++ +    +D        K  D
Sbjct: 394 QIADETAKFVKMLAEVYSDLGFDTFRVKFSD 424


>gi|299771535|ref|YP_003733561.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701623|gb|ADI92188.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 640

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 66/242 (27%), Gaps = 15/242 (6%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    E+   +        G + L  ++E   
Sbjct: 381 DDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDMAEKSL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYD 335
               ++  ++       G  Y     +        +    +                 Y 
Sbjct: 441 ADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPERLDASYV 497

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
              +      +          R I  L    +       + P+    M+         + 
Sbjct: 498 TEDNDRDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLSPLQACVMNITDSQAEACEK 556

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----KDL 450
               L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K+L
Sbjct: 557 VVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNL 615

Query: 451 AK 452
             
Sbjct: 616 GT 617



 Score = 40.6 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 ADNMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|187776553|ref|ZP_02993026.1| hypothetical protein CLOSPO_00065 [Clostridium sporogenes ATCC
           15579]
 gi|187775212|gb|EDU39014.1| hypothetical protein CLOSPO_00065 [Clostridium sporogenes ATCC
           15579]
          Length = 545

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                     ++    + D       +     L  +GI   +     +  G + K AD  
Sbjct: 441 WPMEASAFKIIVTIANEKDEQQFKVAEEIYSNLVNSGISTILDDRKERA-GVKFKDADLW 499

Query: 428 NCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
             P+ I  G   +   + +++++L + KE                    IPI +L  ++K
Sbjct: 500 GIPIRITVGKNIKENNVEIKLRNLKEKKE--------------------IPIDQLQESIK 539

Query: 487 KIL 489
            +L
Sbjct: 540 SLL 542


>gi|304373385|ref|YP_003856594.1| Threonyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309576|gb|ADM22056.1| Threonyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 581

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/143 (11%), Positives = 37/143 (25%), Gaps = 19/143 (13%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G      R +  L                 +     +S          + L        +
Sbjct: 457 GLIGTYERFVSILLEQTKGILPFWLSPKQFVVIPIENSKHSDFALEIAKKLEELNFNVTV 516

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              + +    +++ A  +     II G  E     +  +    G++ S            
Sbjct: 517 DDRNER-INKKIREAQMQKTKFQIIVGDQEVENKNITYR--EYGQQNS------------ 561

Query: 470 RVAQITIPISELVSTVKKILQEN 492
                T+   +L+  +K  ++ N
Sbjct: 562 ----NTLNFEDLIKFIKAKIENN 580



 Score = 36.7 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 71/230 (30%), Gaps = 10/230 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       ++I N+I + I    + YGF  + TP       L +         + +F  
Sbjct: 201 GFPIWLEDGMKIVNKIKEKILFYDKKYGFKEVFTPHF-GEQKLYEISGHFTHYKEDMFGA 259

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              +G+ +  R  +T P       +        ++YR  P   +E+    R+ +      
Sbjct: 260 LVVEGENLIPRP-MTCP------HHIILFDTFKKSYRELPYRISEQSRLYRYEKSGALTG 312

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                S    +  + +     ++    K     I    +     +        D +  E+
Sbjct: 313 LERVRSMLLTEGHIFVAKTQIVDEF--KHLYQMISEVLKFFKIEVNYVSFSKRDPENKEK 370

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                 +    +  L+ V   LG    +  G+          QI  +++ 
Sbjct: 371 FFDDDQMWNQAESDLEKVLKELGVEYQEKIGEAAFYGPKIDFQIKTVLNH 420


>gi|262281009|ref|ZP_06058792.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257909|gb|EEY76644.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 640

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 66/242 (27%), Gaps = 15/242 (6%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    E+   +        G + L  ++E   
Sbjct: 381 DDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDMAEKSL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYD 335
               ++  ++       G  Y     +        +    +                 Y 
Sbjct: 441 ADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPERLDASYV 497

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
              +      +          R I  L    +       + P+    M+         + 
Sbjct: 498 TEDNDRDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLSPLQACVMNITDSQAEACEK 556

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----KDL 450
               L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K+L
Sbjct: 557 VVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNL 615

Query: 451 AK 452
             
Sbjct: 616 GT 617



 Score = 40.6 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 ADNMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|319405682|emb|CBI79305.1| Prolyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 441

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 38/115 (33%), Gaps = 5/115 (4%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +R +   G         ++ ++I   IR   E  G   I  P ++ +D L +  
Sbjct: 26  MLRAGMIRQQT-SGIYSWLPLGKKVLDKICKIIREEQERIGALEILMPTIQSAD-LWRES 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +     +  ++D   + +       ++   + R    ++  +       +  
Sbjct: 84  NRYNDYGLEMLRIKDRQDRDLLYGPTNEEMVTDIFRSYVRSYKDLPLNLYHIQWK 138


>gi|316976611|gb|EFV59868.1| threonyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 1190

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 50/176 (28%), Gaps = 12/176 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    +   I N +++ +R  Y   GF  + TP + Y+  L +         K +F +
Sbjct: 314 GSAFFFPRGAYIYNTLVEFLRKQYRKRGFREVITPNI-YNSRLWETSGHWQHYAKNMFKI 372

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +   L+             +            +  V R ++     F +  Q   
Sbjct: 373 EIEK-ELFGLKPMNCPG-------HCLINELSGALSGLTRVRRFQQDDAHIFCRQDQIAS 424

Query: 134 DNVGSSAETADAEMCMMMADTLE---AVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  G           +  +  L           D          L   LEK  L  
Sbjct: 425 EIEGCLDFLRFVYETLGFSMKLYLSTRPDDFMGDVKTWDEAEAQLQCALEKFKLPW 480



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 73/234 (31%), Gaps = 6/234 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
            + D++  F +   + SE I+  + FL    E     +   +      +    ++    E
Sbjct: 408 FQQDDAHIFCRQDQIASE-IEGCLDFLRFVYETLGFSMKLYLSTRP--DDFMGDVKTWDE 464

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
              +      + K+  T+  G   + G   + I+   +  + Q   +        R+D  
Sbjct: 465 AEAQLQCALEKFKLPWTLNAGDGAFYGPKIDIIVLDAMQRQHQCATIQLDFQLPVRFDLH 524

Query: 338 VSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                             +G    ++A+ +   +      + P     +    +      
Sbjct: 525 YVDENHVKQRPVIIHRAVLGSIERMIAVLTENFAGKWPFWLSPRQAMVIPVHPEFDDYAL 584

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q +  AG   ++ + +S     +++ A        ++ G  E+    + I+
Sbjct: 585 QVQQKIFDAGFECDVDVDASDTMKKKIRNAQLGKWNFILVVGAKEKENSSVNIR 638


>gi|310815331|ref|YP_003963295.1| prolyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754066|gb|ADO41995.1| prolyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 445

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 44/160 (27%), Gaps = 8/160 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++ +R+   +    +  G  P+  P L+ +D L +     D     +  +
Sbjct: 38  GIYAWLPLGYKVLSRLEKIVHEEQQRAGHIPLLMPTLQSAD-LWRESGRYDAYGPEMLRM 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
            D + + +       ++   + R    ++  +       +                  F 
Sbjct: 97  TDRNKREMLFGPTNEEMITDIFRSYVRSYKDLPLTLYHIQWKFRDEMRPRFGVMRGREFL 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
                + D     A  A     +    T E +G+      
Sbjct: 157 MKDGYNFDLTREDALHAYNRHMVSYLRTYERMGLTAIPMR 196


>gi|157364839|ref|YP_001471606.1| threonyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166987326|sp|A8F8Q8|SYT_THELT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157315443|gb|ABV34542.1| threonyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 638

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 11/191 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   +++  R ++  YG++ + TPL+  S+ L +     +   + ++  
Sbjct: 259 GMPVFTPNGTVILKELMEFSRQLHIEYGYEEVMTPLV-MSEKLWRMSGHWEHYKENMY-F 316

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              + Q  +++             +         +YR  PV   E     R+ +      
Sbjct: 317 TTKEEQQFAIKPMNCPG-------HILVYKNKPVSYRDLPVRFFEFGKVHRYERSGVLHG 369

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                S    DA +   +      +    N  H   +          ++    +D + + 
Sbjct: 370 LFRVRSFTQDDAHIFCRIDQVENEIAGVINLVHRIYSQFGF--DYSAELSTMPEDHMGDE 427

Query: 194 LIVLRAIDKLD 204
               +A + L 
Sbjct: 428 ATWEKATEALR 438



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 36/115 (31%), Gaps = 2/115 (1%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y  +  +++   +        + R +  L    +       + PV +  +          
Sbjct: 493 YTSMDGKYQQPVMIHRAIYGSLERFLGILIEHYAGAFP-TWLAPVQVIIIPIADRHFEYA 551

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +         G+R ++     +  G +++ A     P  ++ G  E     + ++
Sbjct: 552 EKVKSEFVKNGVRVKID-ARRETVGYKIRDAQSMKIPYMLVVGDREADSEAVSVR 605


>gi|317491930|ref|ZP_07950364.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920051|gb|EFV41376.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 645

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/351 (13%), Positives = 91/351 (25%), Gaps = 16/351 (4%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMG 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSIFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I        G  Y     +       
Sbjct: 416 IAVKLSTRPEKRIGSDEIWDRAEEDLAEALKENGIPFEYQPGEGAFYGPKIEF---TLHD 472

Query: 315 VMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            ++   +                 Y G  +      +        + R I  L    +  
Sbjct: 473 CLDRAWQCGTVQLDFSLPGRLNASYVGENNERLVPVMIHRAILGSMERFIGILTEEYAGF 532

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + PV +  M+            T+ L+ AGIRA+  L  ++  G +++    R  
Sbjct: 533 YP-TWLAPVQVQVMNITDAQADYVDELTKKLQAAGIRAKSDL-RNEKIGFKIREHTLRRV 590

Query: 430 PLAIIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           P  ++ G  E   G + +     KDL          K  +  R   + Q+ 
Sbjct: 591 PYMLVCGDKEVESGKVAVRTRRGKDLGTMDVNEVIEKLQKEIRSRSLHQLE 641



 Score = 38.3 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 56/204 (27%), Gaps = 13/204 (6%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRVKLKEYDYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRF 125
              +F+    + +   ++        +   +   +    P R    G   RNE  G    
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLH- 371

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                     +     T D        + +             + +    + I  K+   
Sbjct: 372 --------GLMRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSIFGFEKIAVKLSTR 423

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQ 209
            + ++    I  RA + L +   +
Sbjct: 424 PEKRIGSDEIWDRAEEDLAEALKE 447


>gi|307309192|ref|ZP_07588863.1| threonyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|306900338|gb|EFN30954.1| threonyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 660

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 87/263 (33%), Gaps = 20/263 (7%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E + I    LS+  +    E+   +        G +EL   +E V 
Sbjct: 389 DDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDELWDRAEAVM 448

Query: 281 ----KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-- 334
               ++    +  +I + I+ G   + G  +E  L   +  E Q            R+  
Sbjct: 449 TEVLQTIEEQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGA 508

Query: 335 ---DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
              D    + +   +           L + L++             V++ T+  ++D   
Sbjct: 509 FYIDSESEKRQPVMIHRAICGSMERFLGILLENYAGHMPLWISPLQVVVATITSEADDYG 568

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR----NCPLAIIQGTGERSRGMLQI 447
           +     + LR AG+  E    + K     + Y  R       P+ ++ G  E     + I
Sbjct: 569 R--EVAERLRDAGLTVETDFRNEK-----INYKVREHSVTKVPVIVVCGRREAEERSVNI 621

Query: 448 KDLAKGKELSREIKNNESWREAR 470
           + L    + +  +    +   A 
Sbjct: 622 RRLGSQAQTAMSLDEAVASLSAE 644


>gi|307321522|ref|ZP_07600917.1| threonyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306892829|gb|EFN23620.1| threonyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 660

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 87/263 (33%), Gaps = 20/263 (7%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E + I    LS+  +    E+   +        G +EL   +E V 
Sbjct: 389 DDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDELWDRAEAVM 448

Query: 281 ----KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-- 334
               ++    +  +I + I+ G   + G  +E  L   +  E Q            R+  
Sbjct: 449 TEVLQTIEEQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGA 508

Query: 335 ---DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
              D    + +   +           L + L++             V++ T+  ++D   
Sbjct: 509 FYIDSESEKRQPVMIHRAICGSMERFLGILLENYAGHMPLWISPLQVVVATITSEADDYG 568

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR----NCPLAIIQGTGERSRGMLQI 447
           +     + LR AG+  E    + K     + Y  R       P+ ++ G  E     + I
Sbjct: 569 R--EVAERLRDAGLTVETDFRNEK-----INYKVREHSVTKVPVIVVCGRREAEERSVNI 621

Query: 448 KDLAKGKELSREIKNNESWREAR 470
           + L    + +  +    +   A 
Sbjct: 622 RRLGSQAQTAMSLDEAVASLSAE 644


>gi|297819146|ref|XP_002877456.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297323294|gb|EFH53715.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 123

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 20/35 (57%)

Query: 4  KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYE 38
          + K+    P+G  D P +++R+RN + +  +  ++
Sbjct: 64 QKKIDVNPPKGTRDFPPEDMRLRNWLFNHFKETFQ 98


>gi|330723715|gb|AEC46085.1| threonyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 581

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/143 (11%), Positives = 37/143 (25%), Gaps = 19/143 (13%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
           G      R +  L                 +     +S          + L        +
Sbjct: 457 GLIGTYERFVSILLEQTKGILPFWLSPKQFVVIPIENSKHSDFALEIAKKLEELNFNVTV 516

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              + +    +++ A  +     II G  E     +  +    G++ S            
Sbjct: 517 DDRNER-INKKIREAQMQKTKFQIIVGDQEVENKNITYR--EYGQQNS------------ 561

Query: 470 RVAQITIPISELVSTVKKILQEN 492
                T+   +L+  +K  ++ N
Sbjct: 562 ----NTLNFEDLIKFIKAKIENN 580



 Score = 36.7 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 71/230 (30%), Gaps = 10/230 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       ++I N+I + I    + YGF  + TP       L +         + +F  
Sbjct: 201 GFPIWLEDGMKIVNKIKEKILFYDKKYGFKEVFTPHF-GEQKLYEISGHFAHYKEDMFGA 259

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              +G+ +  R  +T P       +        ++YR  P   +E+    R+ +      
Sbjct: 260 LVVEGENLIPRP-MTCP------HHIILFDTFKKSYRELPYRISEQSRLYRYEKSGALTG 312

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                S    +  + +     ++    K     I    +     +        D +  E+
Sbjct: 313 LERVRSMLLTEGHIFVAKTQIVDEF--KHLYQMISEVLKFFKIEVNYVSFSKRDPENKEK 370

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
                 +    +  L+ V   LG    +  G+          QI  +++ 
Sbjct: 371 FFDDDQMWNQAESDLEKVLKELGVEYQEKIGEAAFYGPKIDFQIKTVLNH 420


>gi|185179115|ref|ZP_02964840.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024051|ref|ZP_02996803.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518364|ref|ZP_03003871.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|225551314|ref|ZP_03772260.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209012|gb|EDU06055.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188019085|gb|EDU57125.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188998237|gb|EDU67334.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|225379129|gb|EEH01494.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 580

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/285 (9%), Positives = 80/285 (28%), Gaps = 6/285 (2%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L+E  I+ R        G + V+ ++ E              + +    ++        
Sbjct: 292 RLSEHSILHRYESSGGLTGFERVREMILEDCHVFCRPDQIEHEVIN-AFKMIQEAQEGLG 350

Query: 249 EKSMHELYELVKGTIAGEKGFN-ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            K+      L       +   + ++   S+   +     ++I     +     Y     +
Sbjct: 351 IKTFEIHLSLNDPNDKEKYYDDPQMWEHSQNTLRKMLKDHKIPYKEMVGEAAFYGPKIDF 410

Query: 308 EA--ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           +   +L   +     +            Y    +      +   G      RL+  L   
Sbjct: 411 QVKTVLNRIITVSTIQLDFLLPNRFNLSYINENNEQSTPVMIHIGIIGTYERLLAILLEQ 470

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +      ++    +++      +     LR   +R+ + L + +    +++ A 
Sbjct: 471 TKGVLPLWLSPVQVVIIPVNENLHADYAKELNAKLRKHLVRSSLDLRNER-LSKKIREAQ 529

Query: 426 RRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREA 469
            +  P  I+ G  E      +  +     +  +  + +     E 
Sbjct: 530 IQKIPYQIVVGDEEIKNDKMVTYRRYGSEETTTVSVDDFIKVLEN 574



 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 59/209 (28%), Gaps = 15/209 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I++++   I  +   + FD + TP+L   D   K     D     +FS 
Sbjct: 199 GLPIWLPNGTIIKSQVQKFINEVEFQFNFDTVITPILGSIDLY-KTSGHWDHYKDNIFSP 257

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF-IQCD 132
              D + + LR  +T P       +        R+YR  P+  +E     R+        
Sbjct: 258 VQIDNEVLILRP-MTCP------HHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLTG 310

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
            + V           C       E +   +               I   +    D +   
Sbjct: 311 FERVREMILEDCHVFCRPDQIEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPNDKEKYY 370

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
               +       +     ++ +L + +  
Sbjct: 371 DDPQMW------EHSQNTLRKMLKDHKIP 393


>gi|161349985|ref|NP_279476.2| prolyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169235366|ref|YP_001688566.1| prolyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|114152200|sp|Q9HS52|SYP_HALSA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|259511601|sp|B0R3A3|SYP_HALS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|167726432|emb|CAP13217.1| proline--tRNA ligase [Halobacterium salinarum R1]
          Length = 501

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/397 (12%), Positives = 86/397 (21%), Gaps = 21/397 (5%)

Query: 115 FRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
           +  E         +       V      A  E      D         N Y         
Sbjct: 21  WYAEVVQKAGLADYAPMGGFIVTRPRGYALWEAIQDNLDGWFKDTGVENAYFPMFIPEDY 80

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           L+   EK  + G D     +      D   +  ++     +            +   L  
Sbjct: 81  LE--REKDIVEGFDPEVAWVTQGGHDDLDQRLAVRPTSESIIAPYLSQWVRSHRDLPLRV 138

Query: 235 EQIDIMVSFLSIDLEKSMHE----LYELVKGTIAGEKGFNE----LVVISELVRKSGYNS 286
            Q + +V + + + +           E        E  + E    L     L        
Sbjct: 139 NQWNSVVRWEATETKPFFRTKEFLWQEGHTAHATDEAAWAETTLRLDQYHRLYEDVLGIP 198

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
                     +     T    EA++      +       G               + +  
Sbjct: 199 VLRGRKPDHDKFPGADTTMSVEALMPDGKSVQGGTSHHLGQSFADAFDITFADEDEAERT 258

Query: 347 PATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTM---DHDSDSLSKYQMYTQ 398
             T       R I AL                    V+I  +   D   D          
Sbjct: 259 AYTTSWGLSWRAIGALVMSHSDDQGLVLPPTVAPKQVVIVPIWQEDTKDDVEQYGAEIAA 318

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L   G+R        +N G +    +    P+    G  E     + +     G+    
Sbjct: 319 ELEAQGVRVHFDDRDGRNPGFKFNEWELNGVPVRFEIGPNEVEDDEVTVVHRPDGESTVE 378

Query: 459 EIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           +           + ++     +L       L EN  E
Sbjct: 379 DRAAIADRVHDHLDEV---YDKLYDAAADRLAENVRE 412


>gi|325848534|ref|ZP_08170194.1| threonine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480762|gb|EGC83819.1| threonine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 641

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +R+ +L+   ++    G+  I+TPL+   +   +     D   + ++  
Sbjct: 263 GFPFFKENGMILRHELLNWWTDVLAENGYGEIQTPLIMNEELWHRS-GHWDHYKENMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              DG+  +++            E   +    P R    G V R+E  G   
Sbjct: 321 TKIDGENYAVKPMNCPGSVLVYGEEPHSYRDLPIRLAEYGQVHRHELSGALH 372



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +              + ++ AG R ++   S    G +++ A        ++ G  
Sbjct: 541 QVAIIPVSDKFADFADDLAKKIKKAGYRVDVDHRSEG-VGYKIRQAQLMRTNYMLVVGEN 599

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           E   G L +++    +      +         
Sbjct: 600 EEKSGKLTVRNRDGEETKDVSFEEFIEKLNQE 631


>gi|190575251|ref|YP_001973096.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229558456|sp|B2FN79|SYT_STRMK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|190013173|emb|CAQ46806.1| putative threonyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 633

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 36/113 (31%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   +   +   +R +Y N G+  +  P +   D  L K     D     +F 
Sbjct: 262 GLVFWHPKGWALWQVVEQYMRKVYRNSGYGEVRCPQI--LDVSLWKKSGHWDNYQDNMF- 318

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
             + + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 319 FTESEKRTYAVKPMNCPGHIQVFNQGLHSYRDLPIRYGEFGSCHRNEPSGALH 371



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R +  L    +       + P  +   +      
Sbjct: 494 GAEYVDENSQKKHPVMLHRAIVGSMERFLGILIEHHAGQFP-AWLAPTQVVVANITDAQA 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                 T+ L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++  
Sbjct: 553 DYVSGVTKTLAEQGFRVSSDL-RNEKIGYKIREHTLQRVPYLLVIGDREKENGAVAVRT- 610

Query: 451 AKGK 454
             G+
Sbjct: 611 RSGE 614


>gi|93353957|gb|ABF08046.1| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 663

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/96 (8%), Positives = 28/96 (29%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   +R      G++ + TP +       +     D   + +F +
Sbjct: 289 GMVFWHPKGWQVWQAVEQYMRGRLGQAGYEEVRTPQVMDRSLWERS-GHWDNYKENMF-V 346

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
            + + +  +++        +    +           
Sbjct: 347 TESEKRDYAIKPMNCPGHVQIF-NHGLRSYRDLPLR 381



 Score = 40.2 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M+         +   Q+L+  G RA+  L  ++    +++    +  P  ++ G  
Sbjct: 568 QVVVMNIAESQSEYAENVVQLLQKQGFRAKADL-RNEKITYKIREHSLQKIPYLLVIGDK 626

Query: 439 ERSRGMLQIK 448
           ER    + ++
Sbjct: 627 ERDANQVAVR 636


>gi|281208581|gb|EFA82757.1| glycyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 643

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 54/430 (12%), Positives = 110/430 (25%), Gaps = 56/430 (13%)

Query: 76  DDGQWIS-LRYDLTAP-----LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
             GQ +  LR + TA        R +  N   +       +IG  FRNE        +  
Sbjct: 201 PSGQLLGYLRPE-TAQGIFVNFRRLLDFNGSRLP--FAAAQIGNSFRNEIAPRSGLLRVR 257

Query: 130 QCDV---DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +  +   ++       A  + C +       +  +       +      + + + I  + 
Sbjct: 258 EFTMAEIEHFVHPDRKAHPKFCDVATLKTNLLTAEAQGTTKMVVEMNFGEAVAKGIINNE 317

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                     L       K      +          + D            +I  S+  +
Sbjct: 318 TLAYFMARTQLFLHTVGIKPERMRFRQHQSNEMAHYAADCWD--------AEIHTSYGWV 369

Query: 247 DLEKSMHELYELVKGTIAGEKG----FNELVVISELVRKSGYNSNR------IKISSTIV 296
           +           +K      +     F E     ++V       N+       K ++   
Sbjct: 370 ECVGHADRSCYDLKVHSEKSQVPLVVFEEFKDGPKMVDTIDVKMNKGLMGKTFKATAKEP 429

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG-- 354
                     +EA L F    +     V             +          +G S    
Sbjct: 430 MDFLDSLSNDFEAGLTFKERLDTDGQAVINVNTNQYTITKEMVTLTKTQKKISGESYQPH 489

Query: 355 -------ISRLIVALKSLESSTNNIKEMGPV------------LITTMDHDSDSLSKYQM 395
                  + R+I +L           E   V             I  +  +++       
Sbjct: 490 VIEPSFGLGRIIYSLIEHAYWVREGDEQRCVLSLPAIIAPVKASILPLIGNAELAPFVHR 549

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
             ++L+ AGI  ++   S    G   +YA  D    P  I           + +++    
Sbjct: 550 INRLLKEAGISCKVD-DSGSAIGR--RYARTDEIGIPFGITIDFDTLKDDTVTLRERDTT 606

Query: 454 KELSREIKNN 463
           K++   I + 
Sbjct: 607 KQVRIPISDV 616


>gi|260574976|ref|ZP_05842978.1| tRNA synthetase class II (G H P and S) [Rhodobacter sp. SW2]
 gi|259022981|gb|EEW26275.1| tRNA synthetase class II (G H P and S) [Rhodobacter sp. SW2]
          Length = 367

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 94/349 (26%), Gaps = 39/349 (11%)

Query: 44  PIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV 103
           P+E  +L  +++L     ++ R     +  QD     + LR D T P+ +    +     
Sbjct: 25  PVEADILLPAETLLDLYGEDIRARA--YVTQDPLRGEMMLRPDFTVPVVQAHMTHGADPA 82

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
                  +     +       + Q      D     A  A+            ++     
Sbjct: 83  RYTYLGEVFRKQDHLGPRASEYLQVGYEVFDRTAPEAADAEVFALFARMLAPLSLRAATG 142

Query: 164 DYHIGINNRKILD-------GILEKIGLHGDDKLNERLIVLRAIDK-----LDKFGLQGV 211
           D  I +   + L+        +L  I      +        R         L +     V
Sbjct: 143 DIGILMAAVRGLNTTPRRKAALLRHIWRPARFRALLDRFSARTPQPASRARLLQLLATDV 202

Query: 212 KLLLGEG---------------RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH--E 254
             +L +                R +   D    A + +E+   +   L++    ++    
Sbjct: 203 PGVLIDQSASFIGLRSPAEIAARANALIDDAATAPIAAEEAATLDDLLTLSAPAALALTH 262

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           L  +     A            + +   G +   +   ++  R          E   GF 
Sbjct: 263 LQAIAARMPAIRPAVARFATRLDALAARGIDITTLPFEASHGR-------TSLEYYDGFV 315

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
                  P     V  GGRYD L +             +    L+ ALK
Sbjct: 316 FSFHAADPG-LPPVASGGRYDALTAVLGQGKSIPAVGGVIRPGLVAALK 363


>gi|254391301|ref|ZP_05006505.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326440214|ref|ZP_08214948.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197704992|gb|EDY50804.1| threonyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 658

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 41/122 (33%), Gaps = 3/122 (2%)

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           I R    L    +       + PV    +      +   Q +    +  G+R ++   S 
Sbjct: 538 IERFFAVLLEHYAGAMP-PWLAPVQAVGIPIGDAHIEYLQSFAAEAKKRGLRVDVDASSD 596

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +    +++   +   P  II G  + + G +  +    G + +   ++    +  +V   
Sbjct: 597 R-MQKKIRNHQKLKVPFMIIVGDEDMNAGTVSFRY-RDGSQENGIPRDAALAKLEQVVAD 654

Query: 475 TI 476
            +
Sbjct: 655 RV 656


>gi|16081356|ref|NP_393684.1| glycyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|10639350|emb|CAC11352.1| glycyl-tRNA synthetase related [Thermoplasma acidophilum]
          Length = 476

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/476 (10%), Positives = 125/476 (26%), Gaps = 50/476 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF D       +++ I+ + +  Y   G   ++TP++  +D        E         
Sbjct: 27  SGFYDYGPLGTLLKDNIIAAWKREYAREGAIFLDTPVISPADVFRASGHLE--------K 78

Query: 73  LQDDDGQWISLRYD--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
             D     I+++     T          F++++       I            ++     
Sbjct: 79  FSD-----IAVKCSKCGTP-------YKFESLIKSLGINEIAKTVDEAAAILEKYDVKCP 126

Query: 131 CDVDNVGSSAETADAEMCMMMADTLE---AVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
              + + +  +             L    A GI  N  ++    R  +  I+ ++G    
Sbjct: 127 KCGEKLKNPYDFNLMFRVGSNDLYLRPETAQGIFINFKNLYNYARNSMPIIVCQVGKGFR 186

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           ++++ R  ++R    + +F    V++   E       D +   N+     D++   +S  
Sbjct: 187 NEISPRQALIR----MREFSQAEVEVFYIENDDFPIPDSSVELNMLRNTGDLLKMKVSDA 242

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
           L   +     +        +   +L    + +R   ++           R         +
Sbjct: 243 LRSGIIGNRVMAYFLNKTYEILLKLGFQPDHIRAREHDPGE--------RAHYSSETWDF 294

Query: 308 EAILGFPVMN-------EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           E +L                         G        +    +        +       
Sbjct: 295 EYLLDGDWTEIVGVSDRGTYDLGRHQQFSGENFQIDGRTPKVVEPSYGLDRILLTIMDSS 354

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE--MFLGSSKNFG 418
             +          +     I                 + L       +  +F   S N G
Sbjct: 355 YYRRENGYKVLRLDPHISPIHMAIFPLQKRDDLDKIAKDLFEKMKNIDPFIFYDDSGNIG 414

Query: 419 NQLKYA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              +YA  D    P  +      +    + I++     ++  +I +      +   
Sbjct: 415 R--RYARQDEIGTPFCVTVDYQTKDDETVTIRERDSTSQVRVKISDLLERTRSFPD 468


>gi|91977727|ref|YP_570386.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91684183|gb|ABE40485.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Rhodopseudomonas palustris BisB5]
          Length = 687

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/356 (13%), Positives = 95/356 (26%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
              S       E         E    KR      +N    +      +  + D  L    
Sbjct: 334 WETSGHWDWYRENMFAAQSAGENAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAE 393

Query: 195 IVL--RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             +  R        GL  V+        D++  F   A L  E + I    LS   +   
Sbjct: 394 FGIVHRYEPSGAMHGLMRVRG----FTQDDAHVFCTEAQLAEECLKINDLILSTYSDFGF 449

Query: 253 HELYE-LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE----YYTGCVY 307
                  +        G +E+   +E V  +  +  + +  + I   +      + G  +
Sbjct: 450 DGELTVKLSTRPDKRVGTDEMWDHAERVMATVLSEIKAQGDNRIKTEINPGEGAFYGPKF 509

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALK 363
           E +L   +  + Q            R+        G               + R I  L 
Sbjct: 510 EYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFIGILI 569

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLK 422
              +    +  + PV +      S+     +      R AG+R ++ L + K N     +
Sbjct: 570 EHFAGNFPLW-LAPVQLVVATITSEGDEYAKKVVAAARRAGLRVDIDLRNEKINLKV--R 626

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
                  P  ++ G  E     + ++ L    +      +  +          +  
Sbjct: 627 EHSLAKVPALLVVGRKEAETHSVSVRRLGSDGQTVMATADAIAALVEEATPPDVKR 682


>gi|302815693|ref|XP_002989527.1| hypothetical protein SELMODRAFT_269525 [Selaginella moellendorffii]
 gi|300142705|gb|EFJ09403.1| hypothetical protein SELMODRAFT_269525 [Selaginella moellendorffii]
          Length = 597

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 9/99 (9%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQ 435
             +  +  +       +  +  LR AGI  ++   + ++ G   +YA  D    P AI  
Sbjct: 482 CTVFPLVQNPKLDEIARAISAKLREAGIANKID-TTGRSIGR--RYARTDEIGVPFAITV 538

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +     G + ++D     ++   ++          A  
Sbjct: 539 DS---EDG-VTVRDRDSKDQIRVPLEEVVDLIADMSAGK 573


>gi|260551943|ref|ZP_05825805.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405346|gb|EEW98841.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 640

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/364 (12%), Positives = 90/364 (24%), Gaps = 20/364 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 264 FWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAENMFTTHSES 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 324 RNYAVKPMNCPCHVQVFNQGLKSY-RDLPIRLAEFGSCHRNEPSGSLHGIMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +   L +  +    E+   +        G + L  ++E 
Sbjct: 379 TQDDAHIFCTKEQIGKEVADFIQLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDLAEK 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                 ++  +K       G  Y     +        +    +                 
Sbjct: 439 SLADALDAAGLKWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPVRLDAS 495

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +      +          R I  L    +       + PV    M+         
Sbjct: 496 YVTEENERDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLSPVQACVMNITDAQAEAS 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----K 448
           +     L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K
Sbjct: 555 EQVVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613

Query: 449 DLAK 452
           +L  
Sbjct: 614 NLGT 617



 Score = 40.2 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 AENMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|15965178|ref|NP_385531.1| threonyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|22654127|sp|Q92QB0|SYT_RHIME RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15074358|emb|CAC46004.1| Probable threonyl-tRNA synthetase [Sinorhizobium meliloti 1021]
          Length = 661

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 87/263 (33%), Gaps = 20/263 (7%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E + I    LS+  +    E+   +        G +EL   +E V 
Sbjct: 390 DDAHIFCTDEQMAAECLKINDLILSVYEDFGFKEIVVKLSTRPEKRVGSDELWDRAEAVM 449

Query: 281 ----KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-- 334
               ++    +  +I + I+ G   + G  +E  L   +  E Q            R+  
Sbjct: 450 TEVLQTIEEQSEGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGA 509

Query: 335 ---DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
              D    + +   +           L + L++             V++ T+  ++D   
Sbjct: 510 FYIDSESEKRQPVMIHRAICGSMERFLGILLENYAGHMPLWISPLQVVVATITSEADDYG 569

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR----NCPLAIIQGTGERSRGMLQI 447
           +     + LR AG+  E    + K     + Y  R       P+ ++ G  E     + I
Sbjct: 570 R--EVAERLRDAGLTVETDFRNEK-----INYKVREHSVTKVPVIVVCGRREAEERSVNI 622

Query: 448 KDLAKGKELSREIKNNESWREAR 470
           + L    + +  +    +   A 
Sbjct: 623 RRLGSQAQTAMSLDEAVASLSAE 645


>gi|294649364|ref|ZP_06726795.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824734|gb|EFF83506.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 640

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/364 (12%), Positives = 88/364 (24%), Gaps = 20/364 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 264 FWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAENMFTTHSES 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 324 RNYAVKPMNCPCHVQVFNQGLKSY-RDLPIRLAEFGSCHRNEPSGSLHGIMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +   L +  +    E+   +        G + L  I+E 
Sbjct: 379 TQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDIAEK 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                 +   +        G  Y     +        +    +                 
Sbjct: 439 SLADALDDAGLAWDLQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPIRLDAS 495

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +      +          R I  L    +       + P+    M+         
Sbjct: 496 YVTEDNERDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLAPIQACVMNITDSQADAC 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----K 448
           +     L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K
Sbjct: 555 EQVVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613

Query: 449 DLAK 452
           +L  
Sbjct: 614 NLGT 617



 Score = 39.8 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 AENMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|73981327|ref|XP_860843.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 6
           [Canis familiaris]
          Length = 701

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +   + +F L    
Sbjct: 324 FLPRGTRVYNALVAFIRAEYTRRGFSEVKTPTL-FSAKLWELSGHWEHYQEDMFVLH-HS 381

Query: 78  GQWISLRYDLTAPLARYVAEN 98
              ++L+           A  
Sbjct: 382 TDTLALKPMNCPAHCLMFAHR 402



 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P  +  +   ++     +   Q L+ AG+  ++   S      +++ A   +  
Sbjct: 590 WPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDADSGLTLSRRVRRAQLAHYN 649

Query: 431 LAIIQGTGERSRGMLQIK---DLAKGK 454
              + G  E+S+  + I+   +   G+
Sbjct: 650 FQFVVGQKEQSKKTVNIRTRDNRQLGE 676


>gi|116492650|ref|YP_804385.1| prolyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265886|sp|Q03FS9|SYP_PEDPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116102800|gb|ABJ67943.1| Prolyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 571

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/239 (9%), Positives = 61/239 (25%), Gaps = 8/239 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         ++ ++I   +R   E      + TP +  ++ L K     +   + 
Sbjct: 34  QISAGMYAYLPLAYKVISKIEKIVREEMEAIDAVEMLTPAVLPAE-LWKQSGRYETYGQE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           ++  ++   +   L     +    L R   +++  +          YR     R      
Sbjct: 93  LYKFKNRHDRDFILGPTHEETMTTLIRDEVKSYKKLPLSLYQIQMKYRDEDRPRYGLLRG 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
             F             + + +  +      +     G+   +           D      
Sbjct: 153 REFLMKDAYSFHADEETLDQSFRDFEKAYQNIFRRCGLNFREIVGDAGAMGGRDSKEFSA 212

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                +              L+        L + E + + +   T  A+   E    + 
Sbjct: 213 IASIGEDTIAYSEESDYAANLEMASSVYTDLQMHENQEELTKVATDDAHSIDEVAAKLD 271



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 2/106 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              NI      +I     +++ +         L  AG    +     +  G +   +D  
Sbjct: 466 WPKNIAPYDVHVIPVNAKNAEQMEIADQINGELTKAGYDVLVDDRKERA-GVKFADSDLI 524

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             PL +  G    S G++++K    G+ +  ++    +  E  + Q
Sbjct: 525 GIPLRVTIGKK-ASEGIVEVKLRKTGEAVEVKVAELNNTVEILLNQ 569


>gi|219681610|ref|YP_002467996.1| prolyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219682167|ref|YP_002468551.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471296|ref|ZP_05635295.1| prolyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254782890|sp|B8D937|SYP_BUCA5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782891|sp|B8D7E1|SYP_BUCAT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|219621900|gb|ACL30056.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624453|gb|ACL30608.1| prolyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311086555|gb|ADP66636.1| prolyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087136|gb|ADP67216.1| prolyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087672|gb|ADP67751.1| prolyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 572

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  +I + I    E      I  P+++  + L K     +  
Sbjct: 31  MIRKTSSGLYVWLPTGMRVLKKIKNIITTEMEKINALEILMPIIQP-EYLWKESGRLNLY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
            + +    D       L  
Sbjct: 90  GEELLRFLDRRKNQFILGP 108


>gi|169632514|ref|YP_001706250.1| prolyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|226695258|sp|B0VRW9|SYP_ACIBS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169151306|emb|CAP00010.1| prolyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 571

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 45/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + SL +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPA-SLWEESGRYEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
             G+   +D       L     ++   LAR   +++  +          +R     R   
Sbjct: 90  GPGLLRFKDRHDNPFVLGPTHEEVITDLARNELKSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYNVMYDTYSRIFTRLG 189


>gi|162447220|ref|YP_001620352.1| threonyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189083597|sp|A9NF46|SYT_ACHLI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161985327|gb|ABX80976.1| threonyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 642

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/382 (8%), Positives = 91/382 (23%), Gaps = 18/382 (4%)

Query: 92  ARYVAENF---DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            R + E +     +           +   E +           ++       +     + 
Sbjct: 271 IRRIIERYITDKELELGYLHVYTPIMANVEFYKQSGHWDHYHENMYPPMDLGDGEMLVLR 330

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
            M       +  K    +  +  R    G++ +    G     +R+  +   D       
Sbjct: 331 PMNCPHHMMIYKKDIHSYRELPIRFAELGMMHRYEKSGALSGLQRVREMTLNDAHIFVRP 390

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
             +K             +             +  +      +      +        ++ 
Sbjct: 391 DQIKEEFMRVVHLIIEVYKDF---------KITDYSFRLSYRDPENKEKYFDDDQMWQRA 441

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
            +EL  + + ++        I  ++     L+               +           +
Sbjct: 442 ESELKNVMDEMKLP--YKEAIGEAAFYGPKLDIQVRTAMGMEETLSTVQLDFLLPERFDL 499

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
              G       R    +            +   ++  + S         + +  ++ D  
Sbjct: 500 TYVGEDGKNNHRPVVIHRGVVSTM--ERFVAYLIEEYKGSFPLWLAPVQLKLIPVNLD-L 556

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                    + L+  G R E     ++  G +++ A     P  ++ G  E +   +  +
Sbjct: 557 HKDYVMNLHEQLKKLGFRVESDF-RNEKLGYKIREAQTLKIPYQLVVGDNEMNTHSITYR 615

Query: 449 DLAKGKELSREIKNNESWREAR 470
                K+++  I         R
Sbjct: 616 PYGSEKQINISIDGFIKLLNER 637



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 9/107 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   IR  I   I +     G+  + TP++   +   K     D  ++ ++ 
Sbjct: 259 SGLPFWLPKGATIRRIIERYITDKELELGYLHVYTPIMANVE-FYKQSGHWDHYHENMYP 317

Query: 73  LQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
             D   G+ + LR             +         +YR  P+   E
Sbjct: 318 PMDLGDGEMLVLRPMNCP-------HHMMIYKKDIHSYRELPIRFAE 357


>gi|121601812|ref|YP_988945.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166223323|sp|A1USJ2|SYT_BARBK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120613989|gb|ABM44590.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 658

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/377 (12%), Positives = 105/377 (27%), Gaps = 14/377 (3%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
            +  +                  +E          +        S       E       
Sbjct: 266 MIFWHPKGWKMFQNLVSYMRRRLDEHKYDEVNAPQVLDKSLWETSGHWGWYQENMFKTIP 325

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL--RAIDKLDKFGLQGV 211
                  +       +N    +      +  + D  +      L  R        GL  V
Sbjct: 326 ATNDWNDEHVYALKPMNCPGHVQIFKHGLKSYRDLPIRLAEFGLLHRYEPSGSLHGLMRV 385

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           +        D++  F     L  E + I    LS   +    E+   +        G +E
Sbjct: 386 RS----FTQDDAHVFCTDEQLADECLKINDLILSTYADFGFEEIILKLSTRPEKRVGSDE 441

Query: 272 LVVISELVR----KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
           L   +E +     K+     + +I ++I++G   + G  +E  L   +  E Q       
Sbjct: 442 LWDHAENIMMSVLKTIEKEAKGRIKTSILQGEGAFYGPKFEYTLKDAIGREWQCGTTQVD 501

Query: 328 VGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
                R++        +            G     + +     + +    + P  I    
Sbjct: 502 FNLPERFEVFYINRDSEKCQPVMIHRAIFGSMERFLGILIENFAGHMPLWLAPQQIVVTT 561

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
             S++    +  T  L+ +G+ A   L S K    +++    +  P+ ++ G  E     
Sbjct: 562 ITSEANEYAEKITAKLKASGLSAVSDLRSEK-INYKIREHSLQKVPVILVCGKRESETNS 620

Query: 445 LQIKDLAKGKELSREIK 461
           + ++ L    ++S  I 
Sbjct: 621 VNMRRLGSMNQISLPID 637


>gi|304410724|ref|ZP_07392342.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS183]
 gi|307304819|ref|ZP_07584569.1| tRNA synthetase class II (G H P and S) [Shewanella baltica BA175]
 gi|304351208|gb|EFM15608.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS183]
 gi|306912221|gb|EFN42645.1| tRNA synthetase class II (G H P and S) [Shewanella baltica BA175]
          Length = 403

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 9  AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
           + P G          +   I + +R +Y   GF+ + TP+    + L +     D   +
Sbjct: 18 PQAP-GMIFWHPNGWALFRDIQEHMRRVYRRNGFEEVNTPVFMKKE-LWQTSGHMDMFAE 75

Query: 69 GVF 71
           +F
Sbjct: 76 NMF 78



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/109 (8%), Positives = 33/109 (30%), Gaps = 1/109 (0%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +     +  +    +    +     +R  + +  + +   ++K   ++  P 
Sbjct: 296 PDWLHPVPVAIASVNESNSQFVRQLAALCLARDMRVLVDISQN-SVARKMKRFHKQKVPY 354

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            +  G  E +   + +K    G      +     +   ++        +
Sbjct: 355 ILTVGDKEEAEKCVSVKCRKDGVITHVPLSELCDYLADKLEGKLKRKED 403


>gi|253744932|gb|EET01065.1| Prolyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 534

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 17/177 (9%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVAL--KSLESSTNNIKEMGPVLITTMDHDSDS-- 389
           Y    +      +   G S  +    +++   S       +     V+I  +     +  
Sbjct: 272 YANKANENVHPYLTCAGISTRVLACALSIHGDSRGLVLPPLIAPIHVVIIPIGCGKKNNQ 331

Query: 390 ------LSKYQMYTQMLR-TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                 + K       L+   G+R  +    SK+ G++L Y + +  PL I  G  + + 
Sbjct: 332 ESDRQVMEKVNEIADTLKLKLGLRVSIDDDFSKSMGDKLYYYELKGVPLRIEIGQRDLAN 391

Query: 443 GMLQI--KDLAKGKELSREIKNNESWREARVAQITIPISELV-STV---KKILQENK 493
               +  +D+ K K+ +  I +             + I  ++   +   K  L+E  
Sbjct: 392 NQCIVVPRDMGKDKKKAISITDILKVSSYATENHELVIENIIKDELDAYKARLKEKA 448


>gi|239612679|gb|EEQ89666.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327351753|gb|EGE80610.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 569

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 15/123 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N++   +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 101 GSPLFLPNGTHILNKLTSFLRAQYIQYGFREVLTPSI-YKKSLWEVSGHWQNYKDDMYEV 159

Query: 74  QDDD-------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +                 +   L+          + ++N      P R     P+ RNE 
Sbjct: 160 RGRGATGEQTAETEIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEI 219

Query: 120 HGP 122
            G 
Sbjct: 220 SGS 222


>gi|261191482|ref|XP_002622149.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239589915|gb|EEQ72558.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 569

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 15/123 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N++   +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 101 GSPLFLPNGTHILNKLTSFLRAQYIQYGFREVLTPSI-YKKSLWEVSGHWQNYKDDMYEV 159

Query: 74  QDDD-------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +                 +   L+          + ++N      P R     P+ RNE 
Sbjct: 160 RGRGATGEQTAGTEIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEI 219

Query: 120 HGP 122
            G 
Sbjct: 220 SGS 222


>gi|294853206|ref|ZP_06793878.1| ATP phosphoribosyltransferase regulatory subunit [Brucella sp.
          NVSL 07-0026]
 gi|294818861|gb|EFG35861.1| ATP phosphoribosyltransferase regulatory subunit [Brucella sp.
          NVSL 07-0026]
 gi|326553662|gb|ADZ88301.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis M5-90]
          Length = 380

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 29 ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
          I +++R        + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 13 IFNALRVELNAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 70

Query: 89 APLAR 93
           P+ R
Sbjct: 71 IPVCR 75


>gi|261749935|ref|ZP_05993644.1| ATP phosphoribosyltransferase regulatory subunit [Brucella suis
          bv. 5 str. 513]
 gi|261739688|gb|EEY27614.1| ATP phosphoribosyltransferase regulatory subunit [Brucella suis
          bv. 5 str. 513]
          Length = 378

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 29 ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
          I +++R        + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 11 IFNALRVELNAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 68

Query: 89 APLAR 93
           P+ R
Sbjct: 69 IPVCR 73


>gi|254699482|ref|ZP_05161310.1| ATP phosphoribosyltransferase regulatory subunit [Brucella suis
          bv. 5 str. 513]
          Length = 376

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 29 ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
          I +++R        + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 9  IFNALRVELNAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 66

Query: 89 APLAR 93
           P+ R
Sbjct: 67 IPVCR 71


>gi|237816697|ref|ZP_04595689.1| tRNA synthetase, class-II [Brucella abortus str. 2308 A]
 gi|297249921|ref|ZP_06933622.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 5 str. B3196]
 gi|237787510|gb|EEP61726.1| tRNA synthetase, class-II [Brucella abortus str. 2308 A]
 gi|297173790|gb|EFH33154.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 5 str. B3196]
          Length = 380

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 29 ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
          I +++R        + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 13 IFNALRVELNAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 70

Query: 89 APLAR 93
           P+ R
Sbjct: 71 IPVCR 75


>gi|225628652|ref|ZP_03786686.1| Histidyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225616498|gb|EEH13546.1| Histidyl-tRNA synthetase [Brucella ceti str. Cudo]
          Length = 380

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 29 ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
          I +++R        + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 13 IFNALRVELNAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 70

Query: 89 APLAR 93
           P+ R
Sbjct: 71 IPVCR 75


>gi|114559273|ref|XP_001168878.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 6 [Pan
           troglodytes]
          Length = 684

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 44/146 (30%), Gaps = 8/146 (5%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y   +       +        I          +        + P  +  +   S+  
Sbjct: 533 GAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPLWLSPFQVVVIPVGSEQE 592

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +   Q LR AG+ +++   S      +++ A   +     + G  E+S+  + I+  
Sbjct: 593 EYAKEAQQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIR-- 650

Query: 451 AKGKELSREIKNNESWREARVAQITI 476
                 +R+ +    W      Q  +
Sbjct: 651 ------TRDNRRLGEWDLPEAVQRLV 670



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y + GF  ++TP L +S  L +     +   + +F++Q   
Sbjct: 324 FLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTL-FSTKLWEQSGHWEHYQEDMFAVQPPG 382


>gi|62317135|ref|YP_222988.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 1 str. 9-941]
 gi|260544372|ref|ZP_05820193.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus NCTC 8038]
 gi|260756992|ref|ZP_05869340.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 6 str. 870]
 gi|260759634|ref|ZP_05871982.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 4 str. 292]
 gi|260762877|ref|ZP_05875209.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 2 str. 86/8/59]
 gi|260882803|ref|ZP_05894417.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 9 str. C68]
 gi|261215691|ref|ZP_05929972.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 3 str. Tulya]
 gi|261313708|ref|ZP_05952905.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          pinnipedialis M163/99/10]
 gi|81309332|sp|Q579Q7|HISZ_BRUAB RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|109892202|sp|Q2YIH8|HISZ_BRUA2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|62197328|gb|AAX75627.1| conserved hypothetical protein [Brucella abortus bv. 1 str.
          9-941]
 gi|260097643|gb|EEW81517.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus NCTC 8038]
 gi|260669952|gb|EEX56892.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 4 str. 292]
 gi|260673298|gb|EEX60119.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 2 str. 86/8/59]
 gi|260677100|gb|EEX63921.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 6 str. 870]
 gi|260872331|gb|EEX79400.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 9 str. C68]
 gi|260917298|gb|EEX84159.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 3 str. Tulya]
 gi|261302734|gb|EEY06231.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          pinnipedialis M163/99/10]
          Length = 378

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 29 ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
          I +++R        + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 11 IFNALRVELNAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 68

Query: 89 APLAR 93
           P+ R
Sbjct: 69 IPVCR 73


>gi|23499950|ref|NP_699390.1| ATP phosphoribosyltransferase regulatory subunit [Brucella suis
          1330]
 gi|161620268|ref|YP_001594154.1| ATP phosphoribosyltransferase regulatory subunit [Brucella canis
          ATCC 23365]
 gi|163844377|ref|YP_001622032.1| ATP phosphoribosyltransferase regulatory subunit [Brucella suis
          ATCC 23445]
 gi|225686043|ref|YP_002734015.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis ATCC 23457]
 gi|254702606|ref|ZP_05164434.1| ATP phosphoribosyltransferase regulatory subunit [Brucella suis
          bv. 3 str. 686]
 gi|254711444|ref|ZP_05173255.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          pinnipedialis B2/94]
 gi|254712045|ref|ZP_05173856.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          M644/93/1]
 gi|254715114|ref|ZP_05176925.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          M13/05/1]
 gi|256014974|ref|YP_003104983.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          microti CCM 4915]
 gi|256029926|ref|ZP_05443540.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          pinnipedialis M292/94/1]
 gi|256043108|ref|ZP_05446051.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis bv. 1 str. Rev.1]
 gi|256059577|ref|ZP_05449776.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          neotomae 5K33]
 gi|256111908|ref|ZP_05452864.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis bv. 3 str. Ether]
 gi|256158096|ref|ZP_05456014.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          M490/95/1]
 gi|256252949|ref|ZP_05458485.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          B1/94]
 gi|306845506|ref|ZP_07478075.1| ATP phosphoribosyltransferase regulatory subunit [Brucella sp.
          BO1]
 gi|189043551|sp|A9MDU5|HISZ_BRUC2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|189043552|sp|A9WXP4|HISZ_BRUSI RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|254801978|sp|C0RKC8|HISZ_BRUMB RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|23463529|gb|AAN33395.1| conserved hypothetical protein [Brucella suis 1330]
 gi|161337079|gb|ABX63383.1| Histidyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163675100|gb|ABY39210.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225642148|gb|ACO02061.1| Histidyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|255997634|gb|ACU49321.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          microti CCM 4915]
 gi|306273827|gb|EFM55654.1| ATP phosphoribosyltransferase regulatory subunit [Brucella sp.
          BO1]
 gi|326410369|gb|ADZ67433.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis M28]
          Length = 376

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 29 ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
          I +++R        + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 9  IFNALRVELNAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 66

Query: 89 APLAR 93
           P+ R
Sbjct: 67 IPVCR 71


>gi|83269120|ref|YP_418411.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis biovar Abortus 2308]
 gi|148558110|ref|YP_001257240.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ovis
          ATCC 25840]
 gi|189022397|ref|YP_001932138.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus S19]
 gi|254691379|ref|ZP_05154633.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 6 str. 870]
 gi|254695321|ref|ZP_05157149.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 3 str. Tulya]
 gi|254698417|ref|ZP_05160245.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 2 str. 86/8/59]
 gi|254706263|ref|ZP_05168091.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          pinnipedialis M163/99/10]
 gi|254731864|ref|ZP_05190442.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 4 str. 292]
 gi|256256564|ref|ZP_05462100.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          abortus bv. 9 str. C68]
 gi|229822705|sp|A5VTT5|HISZ_BRUO2 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|229822708|sp|B2SCY8|HISZ_BRUA1 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|82939394|emb|CAJ12348.1| tRNA synthetases, class-II (G, H, P and S) [Brucella melitensis
          biovar Abortus 2308]
 gi|148369395|gb|ABQ62267.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
 gi|189020971|gb|ACD73692.1| tRNA synthetase, class-II (G, H, P and S) [Brucella abortus S19]
          Length = 376

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 29 ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
          I +++R        + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 9  IFNALRVELNAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 66

Query: 89 APLAR 93
           P+ R
Sbjct: 67 IPVCR 71


>gi|17989400|ref|NP_542033.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis bv. 1 str. 16M]
 gi|260564333|ref|ZP_05834818.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis bv. 1 str. 16M]
 gi|260568486|ref|ZP_05838955.1| ATP phosphoribosyltransferase regulatory subunit [Brucella suis
          bv. 4 str. 40]
 gi|261216822|ref|ZP_05931103.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          M13/05/1]
 gi|261220041|ref|ZP_05934322.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          B1/94]
 gi|261319050|ref|ZP_05958247.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          pinnipedialis B2/94]
 gi|261319689|ref|ZP_05958886.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          M644/93/1]
 gi|261323545|ref|ZP_05962742.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          neotomae 5K33]
 gi|261753188|ref|ZP_05996897.1| ATP phosphoribosyltransferase regulatory subunit [Brucella suis
          bv. 3 str. 686]
 gi|265986946|ref|ZP_06099503.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          pinnipedialis M292/94/1]
 gi|265989540|ref|ZP_06102097.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis bv. 1 str. Rev.1]
 gi|265993357|ref|ZP_06105914.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis bv. 3 str. Ether]
 gi|265996611|ref|ZP_06109168.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          M490/95/1]
 gi|265999206|ref|ZP_05465366.2| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis bv. 2 str. 63/9]
 gi|54037306|sp|P64378|HISZ_BRUSU RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|54041365|sp|P64377|HISZ_BRUME RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|17985275|gb|AAL54297.1| histidyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260151976|gb|EEW87069.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis bv. 1 str. 16M]
 gi|260155151|gb|EEW90232.1| ATP phosphoribosyltransferase regulatory subunit [Brucella suis
          bv. 4 str. 40]
 gi|260918625|gb|EEX85278.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          B1/94]
 gi|260921911|gb|EEX88479.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          M13/05/1]
 gi|261292379|gb|EEX95875.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          M644/93/1]
 gi|261298273|gb|EEY01770.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          pinnipedialis B2/94]
 gi|261299525|gb|EEY03022.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          neotomae 5K33]
 gi|261742941|gb|EEY30867.1| ATP phosphoribosyltransferase regulatory subunit [Brucella suis
          bv. 3 str. 686]
 gi|262550908|gb|EEZ07069.1| ATP phosphoribosyltransferase regulatory subunit [Brucella ceti
          M490/95/1]
 gi|262764227|gb|EEZ10259.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis bv. 3 str. Ether]
 gi|263000209|gb|EEZ12899.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis bv. 1 str. Rev.1]
 gi|263092656|gb|EEZ16877.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          melitensis bv. 2 str. 63/9]
 gi|264659143|gb|EEZ29404.1| ATP phosphoribosyltransferase regulatory subunit [Brucella
          pinnipedialis M292/94/1]
          Length = 378

 Score = 51.0 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 29 ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
          I +++R        + +E PL++ +D       ++ R  + +F  ++++G  + LR + T
Sbjct: 11 IFNALRVELNAREAELVEIPLIQPADPFLDMAGEDLR--RRIFLTENENGDSLCLRPEFT 68

Query: 89 APLAR 93
           P+ R
Sbjct: 69 IPVCR 73


>gi|212544894|ref|XP_002152601.1| glycyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224]
 gi|210065570|gb|EEA19664.1| glycyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224]
          Length = 552

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 6/122 (4%)

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAI 433
             VLI  + +    +   +  +Q LR  GI   +   S  + G   +YA  D    PL I
Sbjct: 435 TKVLIVPLSNLPTFVPIIRKISQNLRRLGISCRVD-DSGASIGK--RYARNDELGIPLGI 491

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                      + +++    +++   I    +  ++ V        ++   + + L +  
Sbjct: 492 TIDFDTVKDDSITLRERDSTRQVRASIDEIIASIKSLVDNAE-TWDDVFKRLPEFLSQVG 550

Query: 494 EE 495
            +
Sbjct: 551 ND 552


>gi|167763511|ref|ZP_02435638.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC
           43183]
 gi|167698805|gb|EDS15384.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC
           43183]
          Length = 646

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 49/461 (10%), Positives = 110/461 (23%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +  P                  NK ++ 
Sbjct: 261 KGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCP---------------PIGNKLLY- 304

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                  G   +  K          + +
Sbjct: 305 ------------------------------------ITSGHYAKYGKDSFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      + + +             R    G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCMIYKNSPRSYKDL-----------PLRLAEFGTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHFENFEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DENWEKAEQAIIEACEEKGLKARVEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   + +              D    R    +    G    + R +  L    +    
Sbjct: 495 NLPERFQLEYTGA----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 541

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +          Q     L+   +RA +    ++  G +++  + +  P 
Sbjct: 542 LW-LTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVD-ERNEKIGRKIRDNEMKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +I G  E     + ++   +G + + + ++        V 
Sbjct: 600 MLIVGEKEAENREVSVRKQGEGDQGTMKFEDFAKKVNEEVQ 640


>gi|149499809|ref|XP_001513531.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2, partial
           [Ornithorhynchus anatinus]
          Length = 677

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 44/156 (28%), Gaps = 18/156 (11%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y    S  K + V      +G    ++A+ S          + P  +  +         
Sbjct: 528 TYVSKESDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEEY 587

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q        AG  A++ L  S     +++ A        ++ G  E+    + ++    
Sbjct: 588 AQQIRSEFFEAGFMADVDLDQSSTLNKKIRNAQLAQYNFILVVGEKEKGNNAVNVR---- 643

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                                  I ++  +  +KK+
Sbjct: 644 --------------TRDNKIHGEISVNSAIEKLKKL 665



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 40/141 (28%), Gaps = 2/141 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N +LD IR  Y    F  + +P + Y+  L +        ++ +FS  D +
Sbjct: 299 FLPRGAFLYNTLLDFIREEYHKRNFTEVVSPNV-YNSKLWETSGHWQHYSENMFSF-DVE 356

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+           A    +            V    +                  
Sbjct: 357 KETFALKPMNCPGHCLMFAHRPRSWREMPIRLADFGVLHRNELSGTLSGLTRVRRFQQDD 416

Query: 138 SSAETADAEMCMMMADTLEAV 158
           +       ++   M   L+ +
Sbjct: 417 AHIFCMMEQIEEEMKGCLQFL 437


>gi|319649526|ref|ZP_08003682.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398688|gb|EFV79370.1| prolyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 567

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 35/106 (33%), Gaps = 4/106 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G         ++  ++   IR   +N G   +  P L+ ++ L +           
Sbjct: 34  QNASGIYSYMPLAKKVLQKVEAIIREEMDNAGAVELLMPALQQAE-LWQESGRWYTYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +  ++D   +  +L     ++   L R   +++  +       +  
Sbjct: 93  LMRMKDRHEREFALGATHEEVITSLVRDAVKSYKKLPLALYQIQTK 138


>gi|302380356|ref|ZP_07268826.1| glycine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311846|gb|EFK93857.1| glycine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 465

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/226 (5%), Positives = 48/226 (21%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +         K  +       E + + +  ++     ++       +    +        
Sbjct: 240 EWFDYWRNFCKEFLLNLGIRGENLRLRDHSQEELSFYSKATTDFEYLFPFGWGELWGIAD 299

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +    +              +  +      +V      +         + LE +T
Sbjct: 300 RTDYDLSKHSEGSGEKLEYMDPTTNEKYIPYCIEPSVGVDRMFLSFLCDAYDEEQLEDNT 359

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     +    +  +        K       L             + + G + +  
Sbjct: 360 TRTVLKIHPALAAYKVAVLPLTKKLNDKAMEIYNEL-AKNF--MTHFDDAGSIGKRYRRE 416

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  +           + I+D    ++    ++    +    
Sbjct: 417 DEAGTPYCVTIDFDTLEDNTVTIRDRDTMEQKRMTVEEIIEFVNKE 462


>gi|256372043|ref|YP_003109867.1| glycyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008627|gb|ACU54194.1| glycyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 448

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 37/121 (30%), Gaps = 21/121 (17%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  V +  +      +         L  A I  ++    +++ G + +  D    P
Sbjct: 335 PHLAPYTVAVLPLSRKPALVELAHEIFADL--ATI-VDVDYDETQSIGRRYRRQDEIGTP 391

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
             +           + ++D    +++                   IP+++LV+ V++ L 
Sbjct: 392 WCVTVDFDSLEDRAVTVRDRDTLEQV------------------RIPVADLVAHVRERLA 433

Query: 491 E 491
            
Sbjct: 434 A 434


>gi|227504561|ref|ZP_03934610.1| glycyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198881|gb|EEI78929.1| glycyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 459

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +    +  +  +     LR           +S   G + +  D    P  +    
Sbjct: 366 VAVLPLSKKEELANPARELAAKLR-MNWNV--DYDTSGAIGRRYRRQDEIGTPFCVTYDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                G + +++    ++   +I   E++  AR
Sbjct: 423 DSLEDGAVTVRERDTMEQERVKIDELEAYLAAR 455


>gi|226293450|gb|EEH48870.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 738

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/475 (8%), Positives = 110/475 (23%), Gaps = 65/475 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  + +           +F 
Sbjct: 326 GCPFLLPNGTKIINALQSLLRAEYRKRGYQEVQSPNM--YDVGIWRQSGHWAHYKDDMFK 383

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+       A                      +R        F    + +
Sbjct: 384 L-DVEKREWALKPMNCPGHA-------------VMFGHRERSYRELPLRIADFGVLHRNE 429

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I +    +    R +         L    +  +
Sbjct: 430 ASGALHGLTRVRKFQQDDTHIFCTEDQIMQEIDGLFDFLRSVYGLFGFSFKLKLSTRPEK 489

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            +  L        +  + ++  L + + ++                             +
Sbjct: 490 YMGKLETW----NYAEEQLRAALTKFKGNDW---------------------------EV 518

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            E      G        + L    +           +                  +A   
Sbjct: 519 DEGDGAFYGPKIDITIQDALKREFQCATIQLDYQMPVNFKLEY-----MTGETGAKAKPA 573

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                +   P    +       +    R +   +           L + ++         
Sbjct: 574 DKTTEDAANPDAPSTSSN----EPGPGRARPVVIHRAIIGSFERFLGIIIEHFGGKWPFW 629

Query: 373 KEMGPVLIT-TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                +LI   M   +D + + +     LR   +  ++ +  +     +++         
Sbjct: 630 LSPRQILIVPVMPAVNDYVEELREI---LRGDKLNVDIDISGN-TMQKKIRSGQIAQYNF 685

Query: 432 AIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREARVAQITIPISELVSTV 485
             + G  E++   + I++      ++   +   E  R    A        LV+ +
Sbjct: 686 IFVVGAQEKATRTVNIRNRDDPSSQVKGSLVPLEEARVKLRALR--KERRLVNAL 738


>gi|160878906|ref|YP_001557874.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427572|gb|ABX41135.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 652

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 43/154 (27%), Gaps = 2/154 (1%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
              Y       K   +          R +  L    +            +  +       
Sbjct: 501 DMTYIDANGEKKRPYIIHRTSMGCYERTLAWLIEKYAGKFPTWLCPE-QVRILPISEKYS 559

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +M  + L   G+   +    ++  G +++ A     P  ++ G  E   G++ ++  
Sbjct: 560 DYAKMVEKELLDNGVLVTVD-NRAEKIGYKIREARLDRVPYMLVVGQKEAEEGLVSVRSR 618

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVST 484
             G E  +++ +        +    I   E+   
Sbjct: 619 YLGDEGQKKVSDFVDAICKEIRTKEIRKIEVTEE 652



 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 38/116 (32%), Gaps = 5/116 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   I +  E  G+   +TPLL   D   +     +   +G+F L
Sbjct: 260 GLPLLMPKGAKMIQTLQRWIEDEEERRGYMRTKTPLLAKKDLY-EISDHWNHYKEGMFVL 318

Query: 74  ---QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +D++ +  +LR  +T P   YV +                         G   
Sbjct: 319 GDEEDENAEVFALRP-MTCPFQYYVYKQSQKSYRDLPCRYGETSTLFRNEDSGEMH 373


>gi|307945488|ref|ZP_07660824.1| threonyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307771361|gb|EFO30586.1| threonyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 656

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 64/208 (30%), Gaps = 4/208 (1%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           ++ ++    +   V +     +  ++ + I+ G   + G  +E  L   +  E Q     
Sbjct: 443 DELWDHAEEVMGKVLEQIKEQSGGRVETDILPGEGAFYGPKFEYTLRDAIGREWQCGTTQ 502

Query: 326 GSVGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                  R+        G+            G     + +     S +    + P+ +  
Sbjct: 503 VDFNLPERFGAFYVDNNGEKQTPVMIHRAICGSMERFLGILIENYSGHFPLWLAPLQVVV 562

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
               S++    +     LR AG++ E     ++    +++       P  ++ G  E   
Sbjct: 563 ATITSEADDYGREVAGKLRAAGLKVETDF-RNEKINYKVREHSLAKVPAIVVCGMREAEE 621

Query: 443 GMLQIKDLAKGKELSREIKNNESWREAR 470
             + I+ L    + +  +        + 
Sbjct: 622 KSVNIRRLGSKHQTAMSLDEAIEAFRSE 649


>gi|269139162|ref|YP_003295863.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984823|gb|ACY84652.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304559086|gb|ADM41750.1| Threonyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 642

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEIWDRAEEDLAAALQENGIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYVGENNERVVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+         +  ++ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQAVVMNITDSQAEYVEELSKKLQAAGIRAKSDL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++           I +     +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGVISIDDVIEKLQQEI 632



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/197 (7%), Positives = 50/197 (25%), Gaps = 11/197 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKL 203
           + ++    I  RA + L
Sbjct: 425 EKRIGSDEIWDRAEEDL 441


>gi|323447698|gb|EGB03610.1| hypothetical protein AURANDRAFT_55515 [Aureococcus anophagefferens]
          Length = 657

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 40/123 (32%), Gaps = 3/123 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        + L+S             + +  +  D+   SK           GIR
Sbjct: 505 HRAIFGSLERFFAILLESCGGDLPLWLAPTQMRLLPVTDDARDFSKA--VAAKAAQRGIR 562

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            E+  G  +    Q++ A+ +  P+  + G  E + G L ++    G   + ++      
Sbjct: 563 CEIDSGKDR-LNKQIRNAETQRVPIMCVVGEKEMASGDLAVRARTMGDLGTIDVDALFDE 621

Query: 467 REA 469
            + 
Sbjct: 622 LKD 624



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  RIR  + D+ +  +E  G++ + TP +   D L K     D   +G+F   D +
Sbjct: 259 WHPRGARIRMLMEDTWKAAHERGGYELLVTPHIANVD-LWKTSGHFDFYAEGMFDQMDVE 317

Query: 78  GQWISLRYDLTA 89
            +   L+     
Sbjct: 318 KEQYQLKPMNCP 329


>gi|240274490|gb|EER38006.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 550

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 70/246 (28%), Gaps = 28/246 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N++   +R  Y  YGF  + TP + Y  SL K           ++ +
Sbjct: 109 GSPLFLPNGTHILNKLTSFLRAQYTQYGFLEVLTPSI-YKKSLWKVSGHWQNYKDDMYEV 167

Query: 74  QDDD-------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +  +              +   L+          + ++N      P R     P+ RNE 
Sbjct: 168 RGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEI 227

Query: 120 HGP----GRFRQFIQCDVDNVGSSAET--ADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
            G      R R+F Q D        +               +   G +     +     K
Sbjct: 228 SGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALKFTDTVMRTFGFENYRLVLSTRPEK 287

Query: 174 ILDGILEKIGLHGDDKLNE------RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              G +E +    + +L +      R   L   D         +++   +G+        
Sbjct: 288 DFIGSVE-LWDSAERQLRDALEKSGRSWELNHGDGAFYGPKIDMQIQDSDGKFHQLSTIQ 346

Query: 228 KGANLT 233
              NL 
Sbjct: 347 LDMNLP 352


>gi|225561384|gb|EEH09664.1| threonyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 577

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 70/246 (28%), Gaps = 28/246 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N++   +R  Y  YGF  + TP + Y  SL K           ++ +
Sbjct: 108 GSPLFLPNGTHILNKLTSFLRAQYTQYGFLEVLTPSI-YKKSLWKVSGHWQNYKDDMYEV 166

Query: 74  QDDD-------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +  +              +   L+          + ++N      P R     P+ RNE 
Sbjct: 167 RGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEI 226

Query: 120 HGP----GRFRQFIQCDVDNVGSSAET--ADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
            G      R R+F Q D        +               +   G +     +     K
Sbjct: 227 SGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALKFTDTVMRTFGFENYRLVLSTRPEK 286

Query: 174 ILDGILEKIGLHGDDKLNE------RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              G +E +    + +L +      R   L   D         +++   +G+        
Sbjct: 287 DFIGSVE-LWDSAERQLRDALEKSGRSWELNHGDGAFYGPKIDMQIQDSDGKFHQLSTIQ 345

Query: 228 KGANLT 233
              NL 
Sbjct: 346 LDMNLP 351


>gi|154282499|ref|XP_001542045.1| hypothetical protein HCAG_02216 [Ajellomyces capsulatus NAm1]
 gi|150410225|gb|EDN05613.1| hypothetical protein HCAG_02216 [Ajellomyces capsulatus NAm1]
          Length = 582

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 70/246 (28%), Gaps = 28/246 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N++   +R  Y  YGF  + TP + Y  SL K           ++ +
Sbjct: 113 GSPLFLPNGTHILNKLTSFLRAQYTQYGFLEVLTPSI-YKKSLWKVSGHWQNYKDDMYEV 171

Query: 74  QDDD-------------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +  +              +   L+          + ++N      P R     P+ RNE 
Sbjct: 172 RGRNATGEQTAETQIGEDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEI 231

Query: 120 HGP----GRFRQFIQCDVDNVGSSAET--ADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
            G      R R+F Q D        +               +   G +     +     K
Sbjct: 232 SGSLSGLTRVRRFHQDDGHIFCRPQQIGSEIESALKFTDTVMRTFGFENYRLVLSTRPEK 291

Query: 174 ILDGILEKIGLHGDDKLNE------RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              G +E +    + +L +      R   L   D         +++   +G+        
Sbjct: 292 DFIGSVE-LWDSAERQLRDALEKSGRSWELNHGDGAFYGPKIDMQIQDSDGKFHQLSTIQ 350

Query: 228 KGANLT 233
              NL 
Sbjct: 351 LDMNLP 356


>gi|161621305|ref|YP_583315.2| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 635

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 8/96 (8%), Positives = 28/96 (29%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   +R      G++ + TP +       +     D   + +F +
Sbjct: 261 GMVFWHPKGWQVWQAVEQYMRGRLGQAGYEEVRTPQVMDRSLWERS-GHWDNYKENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
            + + +  +++        +    +           
Sbjct: 319 TESEKRDYAIKPMNCPGHVQIF-NHGLRSYRDLPLR 353



 Score = 40.2 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M+         +   Q+L+  G RA+  L  ++    +++    +  P  ++ G  
Sbjct: 540 QVVVMNIAESQSEYAENVVQLLQKQGFRAKADL-RNEKITYKIREHSLQKIPYLLVIGDK 598

Query: 439 ERSRGMLQIK 448
           ER    + ++
Sbjct: 599 ERDANQVAVR 608


>gi|291557497|emb|CBL34614.1| prolyl-tRNA synthetase, family II [Eubacterium siraeum V10Sc8a]
          Length = 574

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 61/543 (11%), Positives = 141/543 (25%), Gaps = 98/543 (18%)

Query: 24  RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL 83
           RI  +I   IR   +      ++ P++  + SL +     D     +    D +   + L
Sbjct: 48  RITKKIEQIIREEMDKIDGQEVQFPVVMPA-SLWQESGRYDSIGSELLRFTDRNRMPMVL 106

Query: 84  RYDLT-----APLARYVAENFDTIVFPCRTYR--------------------IGPVFRNE 118
              +T       L R   +++    F     +                    +   +   
Sbjct: 107 G--MTHEEAAVHLVREYGKSYTKYPFMIYQIQTKFRDEARPRGGLIRVREFTMKDAYSFH 164

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY---------HIGI 169
                  + + +C              E+  + +D+    G   +++          I  
Sbjct: 165 TSQEDLEQYYDKCHKAYENIFRRAGVPEVISVKSDSGMMGGSISHEFMLLTPVGEDTIAS 224

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +    +  +E      ++  +E    +  +   +   ++ +   L   +  +       
Sbjct: 225 CHECGFNANMEAADSIIENTRDEVSAPMELVHTPNIHTIEEICDFLHTPKEKSCKAVVYQ 284

Query: 230 ANLTSEQI------------DIMVSFLSID-LEKSMHELYELVKGTIAGEKGFNELVVIS 276
            N     +              + +FL  +     + E   L  G I        + V+ 
Sbjct: 285 RNADDSYVVVFTRGDIDVNETKLRNFLGCEIHPAVITEECGLNAGYIGPVGLPENMTVLF 344

Query: 277 ELVRK------SGYNSNRIKISSTIV-RGLEYYTGCVYEAILGFPVMNEKQKP------- 322
           +   +       G N      +   + R         +  IL   +     K        
Sbjct: 345 DTSLQNTNNLSCGANKEEYHYTGLDIDRDCANVEYHDFAKILDGGICPNCHKHSISISRG 404

Query: 323 -VVFGSVGGGGRYDGLVSRFK-----GQNVPATGFSIGISRLIVA--LKSLE-----SST 369
             V      G +Y   ++         +  P  G        + A   ++          
Sbjct: 405 IEVGNIFQLGTKYTKTMNMTYLDSNGEEKTPIMGCYGIGVGRLAASVCEAHHDDYGPIWP 464

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRN 428
             I      +      D+D  +        L+ AG  AE+     + + G     AD   
Sbjct: 465 MPIAPWQVHICAVRSDDADVKACADKLYNTLQNAG--AEVIYDDRQVSAGVMFSDADLLG 522

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            PL ++           +I                      +     +P+ E    V+++
Sbjct: 523 VPLRVVVSPRNLKDNCCEI------------------SARDKSFSYKVPVEETADKVQEL 564

Query: 489 LQE 491
           ++E
Sbjct: 565 IKE 567


>gi|148555657|ref|YP_001263239.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148500847|gb|ABQ69101.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 690

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/443 (10%), Positives = 116/443 (26%), Gaps = 72/443 (16%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+   +   +R   +  G+  ++TP L  +    +      +  + +F +
Sbjct: 293 GSVFWHPKGFRLWRALEAYMRRKLDAAGYVEVKTPQLMDARQ-WEQSGHWGKYRENMFVV 351

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D                                          E          +  + 
Sbjct: 352 PD------------------------------------------EIPNAEEEGPVLSGES 369

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
           + +        A + +          +       G  +R    G L  I      +  + 
Sbjct: 370 ELMALKPMNCPAHVLIFRQGIKSYRDLPIRMAEFGCCHRNEPHGALHGIMRV--RQFTQD 427

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTD-NSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              +   +      ++    LL     D     +     L  E+            E+  
Sbjct: 428 DAHIFVREDQLIAEIKDFCDLLDAVYRDLGFEQYAIKLALRPEKR--------FGSEEMW 479

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +  + ++  +A      E     EL  +  + + +++   T   G  +  G +    + 
Sbjct: 480 DKAEQTLRDAVAASGRATEAFGWEELEGEGAFYAPKLEFHLTDAIGRTWQVGTIQADTVL 539

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              ++                      R +   +           + + ++         
Sbjct: 540 PERLDASYVGED-------------GERHRPVMLHRAILGTFERFIGILIEHHAGRFPLW 586

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 ++ T+  D+D     +     L  AG+R E  L  ++    +++       P  
Sbjct: 587 LAPVQAVVATIVSDAD--DYAREVEAKLAAAGLRVESDL-RNEKINYKVREHSLAKVPAL 643

Query: 433 IIQGTGERSRGMLQIKDLAKGKE 455
           ++ G  E   G + I+ L  G++
Sbjct: 644 LVVGKREAEEGTVAIRRL--GEQ 664


>gi|302876579|ref|YP_003845212.1| glycyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307687254|ref|ZP_07629700.1| glycyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579436|gb|ADL53448.1| glycyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 463

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/226 (7%), Positives = 49/226 (21%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +            +       E +   +   +     +             +        
Sbjct: 238 EWFSYWKNYCFNFLKNLSMKEENLRFRDHGEEELSFYSNATSDIEFKFPFGWGELWGIAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +    +      +       +  V      ++ A    +         + LE   
Sbjct: 298 RTDYDLNQHAKHSGQDLNYLDPVTNEKYVPYVIEPSLGADRVLLAFLCDAYDEEELEDGD 357

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           +         + P     M        K     + L +           + + G + +  
Sbjct: 358 SRTVLRLHPALAPFKAAVMPLSKKLSEKSLEVYEKL-SKKFNV--DYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  I           + ++D     ++  +I   E + E +
Sbjct: 415 DEIGTPYCITIDFDTLEDDSVTVRDRDTMNQVRIKIDELEKFIEEK 460


>gi|213156053|ref|YP_002318098.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|301346223|ref|ZP_07226964.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301596041|ref|ZP_07241049.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|226701414|sp|B7I688|SYT_ACIB5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|213055213|gb|ACJ40115.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057]
          Length = 640

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/364 (12%), Positives = 90/364 (24%), Gaps = 20/364 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 264 FWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYVENMFTTHSES 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 324 RNYAVKPMNCPCHVQVFNQGLKSY-RDLPIRLAEFGSCHRNEPSGSLHGIMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +   L +  +    E+   +        G + L  ++E 
Sbjct: 379 TQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDLAEK 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                 ++  ++       G  Y     +        +    +                 
Sbjct: 439 SLADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPVRLDAS 495

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +      +          R I  L    +       + PV    M+         
Sbjct: 496 YVTEENERDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLSPVQACVMNITDSQAEAS 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----K 448
           +     L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K
Sbjct: 555 EQVVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613

Query: 449 DLAK 452
           +L  
Sbjct: 614 NLGT 617



 Score = 40.2 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 VENMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|196000905|ref|XP_002110320.1| hypothetical protein TRIADDRAFT_22327 [Trichoplax adhaerens]
 gi|190586271|gb|EDV26324.1| hypothetical protein TRIADDRAFT_22327 [Trichoplax adhaerens]
          Length = 603

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 54/179 (30%), Gaps = 8/179 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL---- 73
                +RI N++ + +++ Y   G+  +ETP L ++  L       D  +  +F L    
Sbjct: 260 LLPHGLRIINKLKNFLKDEYRVRGYHEVETP-LTFNQELWVQSGHWDHYSDDMFRLQSDP 318

Query: 74  QDDDGQ-WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG--RFRQFIQ 130
           QD + +  ISL+                +                ++         +  Q
Sbjct: 319 QDHENRGSISLKPMNCPGHCLIFGNERHSYRDLPVRLAEFSALHRDEPSGSLGGLTRLRQ 378

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
              D+             +     L        D++  +      +G L +  +  + +
Sbjct: 379 FHQDDAHIFCTKDQIGEEVQDCLDLINKAYSIFDFNYTMKLSTRPEGYLGETAVWEEAE 437


>gi|119716597|ref|YP_923562.1| threonyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|166225470|sp|A1SJ90|SYT_NOCSJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119537258|gb|ABL81875.1| Ser-tRNA(Thr) hydrolase [Nocardioides sp. JS614]
          Length = 668

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +  +              + ++  G+R E+     +    +++ A     P 
Sbjct: 564 PPWLAPVQVQAIPIAERHNDYLYDVAKRMQAQGLRVEVDDSDDR-MQKKIRNAQLLKVPF 622

Query: 432 AIIQGTGERSRGMLQIKDLAKGKE 455
            +I G  + + G +  +    G++
Sbjct: 623 MMIAGDDDVAAGAVSFRY-RDGRQ 645


>gi|325912604|ref|ZP_08174987.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325478025|gb|EGC81154.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 643

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 43/140 (30%), Gaps = 1/140 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +   G    + R I  L  +             +     ++      
Sbjct: 499 SYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTWLAPLQVKIIPVNNDAHGEY 558

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q     L   G R+E+    ++  G +++ A  +  P  ++ G  E     + ++    
Sbjct: 559 AQNVKDQLMKLGFRSEVDF-RNEKLGYKIREAQTQKVPYTLVLGDDELQHNSVNVRKYGS 617

Query: 453 GKELSREIKNNESWREARVA 472
             + S+ +    S   A VA
Sbjct: 618 EDQESKALSEFVSELSADVA 637



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  + + +  G+  + TP+L   D+  K         + +F
Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKEVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYREDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRV 375

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                ++  A++  ++ +      I    + +   + K  D       
Sbjct: 376 REMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDYYFRLSYRDPKNTDKYFANDE 435

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 436 MWERSQKM 443


>gi|255019144|ref|ZP_05291270.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 182

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 8/105 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  ++ +F  
Sbjct: 27  GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYHEDMFPT 85

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              D + + LR             +         +YR  P+   E
Sbjct: 86  MKMDNEELVLRPMNCP-------HHMMIYKNDIHSYRELPIRIAE 123


>gi|313899489|ref|ZP_07832999.1| threonine--tRNA ligase [Clostridium sp. HGF2]
 gi|312955777|gb|EFR37435.1| threonine--tRNA ligase [Clostridium sp. HGF2]
          Length = 579

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 42/130 (32%), Gaps = 2/130 (1%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              V +  +      L       + L   G R
Sbjct: 452 HRVIFGSIERFIGILIEHFAGHFPVWLAPQQVSVVPVH-HEKHLGYANEVHEKLCALGFR 510

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +++    ++  G +++ A     P  ++ G GE     + ++     + ++  + +  + 
Sbjct: 511 SKLD-ARNEKLGYRIREAQLSKIPYQLVIGDGEIENRSVTLRRAQSRESITMSLDDFIAM 569

Query: 467 REARVAQITI 476
            E  V +  +
Sbjct: 570 MEKAVKEKKL 579



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + IRN + +     +    +  I+TP++   + L +     +   + +++ 
Sbjct: 203 GMPFFLPNGMIIRNLLENFWYEEHTKENYQFIKTPIMMSKE-LWEVSGHWENYKENMYTT 261

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 262 M-VDDREFAIKPMNCPG 277


>gi|134100182|ref|YP_001105843.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea
          NRRL 2338]
 gi|291006599|ref|ZP_06564572.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea
          NRRL 2338]
 gi|133912805|emb|CAM02918.1| putative threonyl-tRNA synthetase [Saccharopolyspora erythraea
          NRRL 2338]
          Length = 405

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G          +R+ + + IR+     G+  + +P+L   +   +     D     +F  
Sbjct: 23 GLPYWLPDGALVRHTLEEYIRDAERRAGYQHVYSPVLGKRELY-EISGHWDHYRDDMFPP 81

Query: 74 QDDDGQWISLRYDLTA 89
               + + LR  L  
Sbjct: 82 MRLGAEQVVLRPSLCP 97


>gi|34496803|ref|NP_901018.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|73919781|sp|Q7NYC6|SYT_CHRVO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|34102658|gb|AAQ59023.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 633

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+             + L   G R E+ L  ++  G +++    +  P  I
Sbjct: 535 WLAPVQMVVMNITEAQAEYAAEIAKELEKQGFRVELDL-RNEKIGYKIREHSLQKLPYQI 593

Query: 434 IQGTGERSRGMLQIK 448
           I G  E++ G++ ++
Sbjct: 594 IVGDKEKADGLVAVR 608



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/256 (10%), Positives = 72/256 (28%), Gaps = 16/256 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   +R    + G+  + TP++  ++   +         + +F +
Sbjct: 261 GMVFWHPKGWQLWQNVEQYMRAKLNHEGYKEVRTPMMMDANLWERS-GHAANYRENMF-I 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            + + +  +++        +       +    P R    G   RNE  G           
Sbjct: 319 TESEKRDYAVKPMNCPGHVQIFNSGLRSYRDLPLRYAEFGSCHRNEPSGALH-------- 370

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +       D        D +       +   + + +R   D +  K+ L  + ++ E
Sbjct: 371 -GIMRVRGFVQDDGHIFCTEDQINQEAKDFHRLVMEVYDRFGFDKVAIKLALRPEKRIGE 429

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                   DK ++   + ++    E           G  +     D +         +  
Sbjct: 430 E----STWDKAEEGMREALRACGVEWEELPGEGAFYGPKIEYHIKDALGRSWQCGTLQLD 485

Query: 253 HELYELVKGTIAGEKG 268
             L E +      +  
Sbjct: 486 FMLPERLDAEYVADDN 501


>gi|329954516|ref|ZP_08295607.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328527484|gb|EGF54481.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 646

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 49/461 (10%), Positives = 110/461 (23%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +  P                  NK ++ 
Sbjct: 261 KGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCP---------------PIGNKLLY- 304

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                  G   +  K          + +
Sbjct: 305 ------------------------------------ITSGHYAKYGKDSFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      + + +             R    G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCMIYKNSPRSYKDL-----------PLRLAEFGTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHFENFEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DENWEKAEQAIIEACEEKGLKAKVEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   + +              D    R    +    G    + R +  L    +    
Sbjct: 495 NLPERFQLEYTGA----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 541

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +          Q     L+   +RA +    ++  G +++  + +  P 
Sbjct: 542 LW-LTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVD-ERNEKIGRKIRDNEMKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +I G  E     + ++   +G + + + ++        V 
Sbjct: 600 MLIVGEKEAENREVSVRKQGEGDQGTMKFEDFAKKVNEEVQ 640


>gi|295664831|ref|XP_002792967.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226278488|gb|EEH34054.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 764

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/483 (9%), Positives = 118/483 (24%), Gaps = 77/483 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  + +           +F 
Sbjct: 351 GCPFLLPNGTKIINALQSLLRAEYRKRGYQEVQSPNM--YDVGIWRQSGHWAHYKDDMFK 408

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+       A                      +R        F    + +
Sbjct: 409 L-DVEKREWALKPMNCPGHA-------------VMFGHRERSYRELPLRIADFGVLHRNE 454

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I +    +    R +         L    +  +
Sbjct: 455 ASGALHGLTRVRKFQQDDTHIFCTEDQIMQEIDGLFDFLRSVYGLFGFSFKLKLSTRPEK 514

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGR-TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
            +  L        +  + ++  L + +  D   D   GA    +    +   L  + + +
Sbjct: 515 YMGKLETW----NYAEEQLRAALTKFKGNDWEVDEGDGAFYGPKIDITIQDALKREFQCA 570

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             +L   +      E                           T  +           A  
Sbjct: 571 TIQLDYQMPVNFKLE----------------------YMTGETGAKAKPADKTTEDAANP 608

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P  N   +P                 R +   +           L + ++        
Sbjct: 609 DAPSTNSSSEPG--------------PGRARPVVIHRAIIGSFERFLGIIIEHFGGKWPF 654

Query: 372 IKEMGPVLIT-TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                 +LI   M   +D + + +     LR   +  ++ +  +     +++        
Sbjct: 655 WLSPRQILIVPVMPAVNDYVEELREI---LRGDKLNVDIDISGN-TMQKKIRSGQIAQYN 710

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
              + G  E++   + I++                   ++     +P+ E    ++ + +
Sbjct: 711 FIFVVGAQEKATRTVNIRNRDD--------------PSSQAKGSLVPLEEARVKLRALRK 756

Query: 491 ENK 493
           E +
Sbjct: 757 ERR 759


>gi|34482934|emb|CAE09933.1| THREONYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 536

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 41/98 (41%), Gaps = 1/98 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +    + L   +     L+  G+ AE+    ++    +++  +++  P+ ++ G
Sbjct: 438 PTPVAIVPIGEEQLEYAKHLRLELQKVGVYAEIH-DKNETLNKKIRTVEKQRVPMIVVLG 496

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             E +   + I+D  + ++            + +++++
Sbjct: 497 EREVNEKKVAIRDRREKRQYELGEAEFIQLAKEKMSEV 534



 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R R+   +   +    ++P+  P +  SD L K         + ++  
Sbjct: 162 GLPIWLPAGARLRRRLEAMLTEAHIRRNYEPVRGPEILKSD-LWKISGHYQNYKENMY-F 219

Query: 74  QDDDGQWISLRYDLTAP 90
              D     ++      
Sbjct: 220 TKIDEVEYGIKPMNCVG 236


>gi|305664643|ref|YP_003860930.1| threonyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88707344|gb|EAQ99590.1| threonyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 646

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 33/111 (29%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + + L+    +          +I  +          +   
Sbjct: 509 NESHRPVMIHRAPFGSMERFVALLLEHTGGNFPLWLIPEQAIILPVS--EKHEKYAEKVL 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             L    IRA +    ++  G +++ A+    P  +I G  E     + ++
Sbjct: 567 NSLENNEIRALID-NRNETVGKKIREAEMGKLPFMLIVGESEEENNTIAVR 616



 Score = 39.8 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 17/47 (36%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R R+   ++   +  G++ + TP +   +      
Sbjct: 262 GLPLWLPKGAALRERLEQFLKKAQKKAGYEMVVTPHIGQKELYVTSG 308


>gi|315181382|gb|ADT88295.1| threonyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 642

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/350 (12%), Positives = 91/350 (26%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  DY I   N      I  +      D       
Sbjct: 299 MMDRVLWERSGHWDKYADAMFTTSSENRDYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F     +  E    +              +
Sbjct: 359 FGSCHRNEPSGSLHGI-MRVRGFTQDDAHIFCTEDQIQEEVTSCIKMVYDTYTTFGFDNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    +  I        G  Y     +        
Sbjct: 418 AVKLSTRPEKRVGSDEIWDKSEEALKHSLEAMGIAYEIQEGEGAFYGPKIEFTLY---DC 474

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           ++   +              G  Y G  +      +        + R I  L    +   
Sbjct: 475 LDRAWQCGTVQLDFNLPTRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 534

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +     D  +    Q   Q L+  GIRA+  L  ++  G +++    +  P
Sbjct: 535 PTWLAPEQAVVVNITDKQA-DYAQEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVP 592

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  S  +  +A   + + E
Sbjct: 593 YMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFVSHIQTEIASRKLNLEE 642



 Score = 41.7 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 42/152 (27%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR+    YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFIRHKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENRDYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQEEVTSCIKMV 405


>gi|308158015|gb|EFO60895.1| Glycyl-tRNA synthetase [Giardia lamblia P15]
          Length = 621

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 72/288 (25%), Gaps = 26/288 (9%)

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD---------NSGDFTKGANL 232
              H   +L          D L   G   +  +      D                    
Sbjct: 314 FRQHLPKQLAHYARDCWDCDCLLSCGWTEIVGIADRSAYDLQVHSKASGVDLTCFLKYPE 373

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             E    + +    +  K   +   LV+  I   +G  +L  +   +R +G  + RI   
Sbjct: 374 PREVSYNICTLRMKECAKIFKQDVNLVRSAIEAIQG-EDLEALKAELRTTGSYTLRIPRE 432

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
                          EA   F ++    +      +  G      V              
Sbjct: 433 DG-------------EAEKTFEILPNYVQFNSDTKMLHGESIVPHVIEPSFGVGRILYSI 479

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMF 410
           +  S     +    +       +       +      D LS      + LR +GI A+  
Sbjct: 480 LEHSFYTRDIDEQRTVFRFKPYLVGCKAVVLPLQRNDDLLSMSSHVLERLRRSGIAAKQD 539

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
              +   G +   AD    P A+         G + I++     ++  
Sbjct: 540 ATGAP-IGRRYARADEIGIPFAVTIDFQTLEDGSVTIRERDSMSQIRI 586


>gi|296194829|ref|XP_002745122.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 723

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N ++D IR+ Y   GF  + TP + Y+  L          ++ +FS + + 
Sbjct: 345 FLPKGAYIYNALIDFIRSEYRKRGFQEVVTPNI-YNSRLWMTSGHWQHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 404 -EQFALKPMNCPG 415



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 41/123 (33%), Gaps = 4/123 (3%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   Q    A   A++ L     
Sbjct: 598 ERMIAILTENYGGKWPFWLSPRQVMVVPVGPSCDEYAQKVRQQFHAAKFMADVDLDPGCT 657

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK---GKE-LSREIKNNESWREARVA 472
              +++ A        ++ G  E+  G + I+       G+  +S  ++  +  +E+R  
Sbjct: 658 LNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTVSETVERLQQLKESRSK 717

Query: 473 QIT 475
           Q  
Sbjct: 718 QAE 720


>gi|260770313|ref|ZP_05879246.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260615651|gb|EEX40837.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 642

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/350 (12%), Positives = 91/350 (26%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  DY I   N      I  +      D       
Sbjct: 299 MMDRVLWERSGHWDKYADAMFTTSSENRDYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F     +  E    +              +
Sbjct: 359 FGSCHRNEPSGSLHGI-MRVRGFTQDDAHIFCTEDQIQEEVTSCIKMVYDTYTTFGFDNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    +  I        G  Y     +        
Sbjct: 418 AVKLSTRPEKRVGSDEIWDKSEEALKHSLEAMGIAYEIQEGEGAFYGPKIEFTLY---DC 474

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           ++   +              G  Y G  +      +        + R I  L    +   
Sbjct: 475 LDRAWQCGTVQLDFNLPSRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 534

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +     D  +    Q   Q L+  GIRA+  L  ++  G +++    +  P
Sbjct: 535 PTWLAPEQAVVVNITDKQA-DYAQEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVP 592

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  S  +  +A   + + E
Sbjct: 593 YMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFVSHIQTEIASRKLNLEE 642



 Score = 41.7 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 42/152 (27%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR+    YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFIRHKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENRDYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQEEVTSCIKMV 405


>gi|169634342|ref|YP_001708078.1| threonyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|238688108|sp|B0VKJ4|SYT_ACIBS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169153134|emb|CAP02213.1| threonyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 640

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/364 (12%), Positives = 90/364 (24%), Gaps = 20/364 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 264 FWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAENMFTTHSES 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 324 RNYAVKPMNCPCHVQVFNQGLKSY-RDLPIRLAEFGSCHRNEPSGSLHGIMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +   L +  +    E+   +        G + L  ++E 
Sbjct: 379 TQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDLAEK 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                 ++  ++       G  Y     +        +    +                 
Sbjct: 439 SLADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPVRLDAS 495

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +      +          R I  L    +       + PV    M+         
Sbjct: 496 YVTEENERDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLSPVQACVMNITDSQAEAS 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----K 448
           +     L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K
Sbjct: 555 EQVVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613

Query: 449 DLAK 452
           +L  
Sbjct: 614 NLGT 617



 Score = 40.2 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 AENMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|221068963|ref|ZP_03545068.1| prolyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713986|gb|EED69354.1| prolyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 580

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 41/109 (37%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++   +R      G      P+++ ++ L +     ++ 
Sbjct: 31  MIKKLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAIETTMPVVQPAE-LWQETGRFEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  +QD  G+   ++    ++   +AR   +++  +       +  
Sbjct: 90  GPELLRIQDRHGRDFVIQPTSEEVVTDIARQEFKSYKQLPKNLYQIQTK 138


>gi|256545863|ref|ZP_05473219.1| threonine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398559|gb|EEU12180.1| threonine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 641

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + +R+ +L+   ++    G+  I+TPL+   +   +     D   + ++  
Sbjct: 263 GFPFFKENGMILRHELLNWWTDVLAENGYGEIQTPLIMNEELWHRS-GHWDHYKENMY-F 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              DG+  +++            E   +    P R    G V R+E  G   
Sbjct: 321 TKIDGENYAVKPMNCPGSVLVYGEEPHSYRDLPIRLAEYGQVHRHELSGALH 372



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 28/92 (30%), Gaps = 1/92 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +              + ++ AG R E+   S    G +++ A        ++ G  
Sbjct: 541 QVEIIPVSDKFADFADDLAKKIKKAGYRVEVDHRSEG-VGYKIRQAQLMRTNYMLVVGEN 599

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           E   G L +++    +      +      +  
Sbjct: 600 EEKSGKLTVRNRDGEETKDVSFEEFIEKLDEE 631


>gi|242774039|ref|XP_002478362.1| threonyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218721981|gb|EED21399.1| threonyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 532

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 13/121 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 97  GSPLFLPNGTHIINKLIGFLRAQYRQYGFREVLTPNI-YKKSLWEISGHWQNYKDDMYEV 155

Query: 74  QDDD-----------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           +               +   L+          + ++N      P R     P+ RNE  G
Sbjct: 156 RGRGATGETEGELGEDEQYGLKPMNCPGHCLLFKSQNHSYRDLPVRYADFSPLHRNEISG 215

Query: 122 P 122
            
Sbjct: 216 S 216


>gi|218681115|ref|ZP_03529012.1| ATP phosphoribosyltransferase regulatory subunit [Rhizobium etli
          CIAT 894]
          Length = 245

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 31 DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
          + +   +     + I+TP+++ ++       ++ R  + +F  + + G  + LR + T P
Sbjct: 11 NDLLAEFTARNAERIDTPVIQPAEPFLDIAGEDLR--RRIFMTESETGASLCLRPEFTIP 68

Query: 91 LA 92
          + 
Sbjct: 69 VC 70


>gi|182678746|ref|YP_001832892.1| tRNA synthetase class II (G H P and S) [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182634629|gb|ACB95403.1| tRNA synthetase class II (G H P and S) [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 379

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 111/367 (30%), Gaps = 60/367 (16%)

Query: 41  GFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFD 100
           G+   E  +L+ +        D       ++   D  G    LR + T P++R   +   
Sbjct: 26  GYPRCEPKILQPAAIFFDSGED---LRGQLYLTSDISGADYCLRPEYTIPVSRLYLD-SP 81

Query: 101 TIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGI 160
                      GPVFR     P  F Q            A  A+          LEAVG 
Sbjct: 82  QAGSSAGFSYCGPVFRYRGERPSEFIQAGIESFGRQDREAADAEILGL-----ALEAVGD 136

Query: 161 KRNDYHIGINNRKILDGILEKIGLHG------------------------DDKLNERLIV 196
                 + I +  +   +L+ + L                          +    +   V
Sbjct: 137 FAERLSVRITDVGLFTALLDALELPPPWRRRLLRAQVLGTPFDMIFAPTGESTQTDHSGV 196

Query: 197 LRAIDKLDKFGLQGVKLLLGE----------------GRTDNSGDFTKGANLTSEQIDIM 240
           L  +D  D+ G + +   L                   R            L SE+  I+
Sbjct: 197 LALLDGADRQGARALVEDLLSIAGFASISGRTPAEIADRFLEQAALKSSQGLASEKRQII 256

Query: 241 VSFLSI--DLEKSMHELYELVKGTIAGEKGF-NELVVISELVRKSGYNSNRIKISSTIVR 297
             FL+I  D +++   +  L+           +        +   G + + +  ++   R
Sbjct: 257 ERFLAIEGDPDQASEAMRRLLSEAGLDLTSILDSFDARLGFIAARGLDVSSLHFATRFTR 316

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
            L+YYTG V+EA          +       V GGGRYD L+ +       +   +     
Sbjct: 317 NLDYYTGFVFEA--------HDRLRPQEKPVIGGGRYDKLLRQLGAPQDISAVGAAIWIE 368

Query: 358 LIVALKS 364
            + A+  
Sbjct: 369 ALDAMNK 375


>gi|160895177|ref|ZP_02075950.1| hypothetical protein CLOL250_02737 [Clostridium sp. L2-50]
 gi|156863211|gb|EDO56642.1| hypothetical protein CLOL250_02737 [Clostridium sp. L2-50]
          Length = 469

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/231 (6%), Positives = 59/231 (25%), Gaps = 11/231 (4%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +            +      +E +   +   +     ++       +    +        
Sbjct: 241 EWFDYWRSFCINWLKDLGIKDEEMRARDHSPEELCFYSKGTTDIEFLFPFGWGELWGIAD 300

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +             + +  +      ++ A   ++         +++ +  
Sbjct: 301 RTDYDLTQHQTVSGEPMDYFDDEKKEKYIPYVIEPSLGADRVTLAFLCAAYDEENIGTEE 360

Query: 370 --------NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                   +    + PV I  +        + +     L       E       N G + 
Sbjct: 361 KPDVRTVLHFHPALAPVKIGVLPLSKKLGEEAEKVYAELCKY-YNCE--YDDRGNIGKRY 417

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  D    P  +         G + ++D    ++   +I++ +++ E +  
Sbjct: 418 RRQDEIGTPFCVTYDFDSEEDGAVTVRDRDTMEQERVKIEDLKAYFEKKFE 468


>gi|77735697|ref|NP_001029542.1| threonyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|110287979|sp|Q3ZBV8|SYTC_BOVIN RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73586669|gb|AAI03083.1| Threonyl-tRNA synthetase [Bos taurus]
 gi|296475710|gb|DAA17825.1| threonyl-tRNA synthetase [Bos taurus]
          Length = 723

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 39/123 (31%), Gaps = 4/123 (3%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   Q    A    ++ L     
Sbjct: 598 ERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHNAKFMVDIDLDPGCT 657

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK---GKEL-SREIKNNESWREARVA 472
              +++ A        ++ G  E++ G + I+       G+   S  I+  +  + +R  
Sbjct: 658 LNKKIRNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTISETIERLQQLKHSRSK 717

Query: 473 QIT 475
           Q  
Sbjct: 718 QAE 720



 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + Y+  L       +  ++ +FS + + 
Sbjct: 345 FLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNI-YNSRLWVTSGHWEHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 404 -ELFALKPMNCPG 415


>gi|57640485|ref|YP_182963.1| prolyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|74503571|sp|Q5JF49|SYP_PYRKO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57158809|dbj|BAD84739.1| prolyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 481

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 37/258 (14%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             E +         E+   E + I + + +       I       +    Y     E ++
Sbjct: 159 FFEAHTAHDSYEDAERQIKEDLEIFDNLARFLALPYIISKRPEWDKFPGAYYSLGAEVMM 218

Query: 312 GFPVMNEKQKPVVFGSVGGGG---RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                 +      +          +Y+      +  +    G S  +   ++A+   +  
Sbjct: 219 PDGRTLQIGTMHNYRQNFAKAYNIQYETETGDHEYVHQTTFGMSERLLAAVIAIHGDDRG 278

Query: 369 TNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRA---EMFLGSSKNFGNQ 420
                 + P+ +  +     D ++D  +  +   + LRTAGIR    E  +   +     
Sbjct: 279 MVLPPTIAPIQVVIVPIPKKDSEADVFAYAREIAEELRTAGIRVHVDERDIRPGR----- 333

Query: 421 LKYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            KY D   +  PL I  G  +       +                   R   + +IT+  
Sbjct: 334 -KYYDWELKGVPLRIEVGPRDVEGKKAVL------------------ARRDTLEKITVER 374

Query: 479 SELVSTVKKILQENKEEI 496
             +V  V+K L    E +
Sbjct: 375 DNIVEEVRKTLDAIHENL 392



 Score = 37.1 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 16/61 (26%)

Query: 11 LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
            +G        ++I   I   I    E  G D +  P L       K           V
Sbjct: 31 PVKGMNVWLPYGLKIMRNIERFIHAEMERTGHDEVLFPALIPETEFQKEAEHIKGFEGEV 90

Query: 71 F 71
          +
Sbjct: 91 Y 91


>gi|88803834|ref|ZP_01119357.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88780362|gb|EAR11544.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 646

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 43/135 (31%), Gaps = 3/135 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + V L+    +           +  +          +   
Sbjct: 509 NQLHRPVMIHRAPFGSMERFIAVLLEHTGGNFPLWLTPDQ--VILLPISDKYQKYSEKVL 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + L  + IRA +    ++  G +++ A+    P  +I G  E   G + ++   +G   +
Sbjct: 567 ESLENSEIRA-LADNRNEKTGRKIRDAEVSKTPYMVIVGEKEEQEGTVSVRKHGEGDIGT 625

Query: 458 REIKNNESWREARVA 472
             I+   S  +   +
Sbjct: 626 FTIEEFISLIKTEES 640



 Score = 39.8 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 18/47 (38%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R R+ D ++   +  G++ + TP +   +      
Sbjct: 262 GLPLWLPKGAALRGRLEDFLKKAQKKAGYEMVMTPHIGQKELYVTSG 308


>gi|297621143|ref|YP_003709280.1| hypothetical protein wcw_0913 [Waddlia chondrophila WSU 86-1044]
 gi|297376444|gb|ADI38274.1| hypothetical protein wcw_0913 [Waddlia chondrophila WSU 86-1044]
          Length = 509

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 3/127 (2%)

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            G        ++AL    S       + P  +  +    + ++      + L   G R  
Sbjct: 379 VGSVFRSLESLIALLLESSKGELPFWLAPEQVRILPVKQEDVAWAVEIAEELIENGYRVH 438

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
                  +   ++  A++   P  ++ G  ER    + ++  +KG + S    + E + E
Sbjct: 439 CDADPG-SLSEKVSVANQYKVPYIVVVGKREREEQAVSVRCSSKGNKASV--VSFELFME 495

Query: 469 ARVAQIT 475
               Q  
Sbjct: 496 ELKKQRE 502


>gi|149193855|ref|ZP_01870953.1| prolyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135808|gb|EDM24286.1| prolyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 574

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 48/127 (37%), Gaps = 8/127 (6%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD------HDSDSLSKYQMYTQMLRTA 403
            + IG+SRLI A          I     +    +D         + +   +   + L++ 
Sbjct: 446 CYGIGVSRLIAAAIEQNHDDKGIIWPKEIAPFVVDIIIGDVKKENQVKFAENLYEKLKSE 505

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            I+  +     + FG ++   +    P A+I G      G+++I+D    +++  +    
Sbjct: 506 NIKVLLDDRKER-FGVKINDFELLGFPYAVIVGKK-LKDGIVEIRDRRSDEKIEVKSDEV 563

Query: 464 ESWREAR 470
             + + +
Sbjct: 564 FDFLKEK 570



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 30/97 (30%), Gaps = 4/97 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G  D       + + I D I+   +N G   +    +   + L +      +    +  +
Sbjct: 38  GIYDFAPLGKIVLDNIRDIIKKEMDNSGAQEVMLSFITPYE-LWEETGRAKKYGDELLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
           +D  G    L     +    L R   +++  +     
Sbjct: 97  EDRKGNKFVLSPTNEESIVDLVRSYVKSYKQLPINLY 133


>gi|25028341|ref|NP_738395.1| threonyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|23493626|dbj|BAC18595.1| putative threonyl-tRNA synthetase [Corynebacterium efficiens
           YS-314]
          Length = 720

 Score = 51.0 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 40/118 (33%), Gaps = 9/118 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    D +   +     LR  G RAE+     +    +++       P  +
Sbjct: 607 WLAPHQVVGIPVAEDFIPHLEKVVDKLRARGFRAEVDTSDDR-MQKKIRTHTTGKIPFML 665

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELVSTVK 486
           + G  +     +  + L  G +     +   ++   +W   R      P  E ++ ++
Sbjct: 666 LAGGRDVEADAVSFRFL-DGTQVNGVPVDEAVELISTWILERNNTQ--PSEETIAALR 720



 Score = 37.1 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            G          +R  + +  R  +   G+  + TP    SD   K         +G+F
Sbjct: 318 SGLPVFHPNGAIVRLEMEEHSRRRHIQAGYSFVNTPHATKSDLFEKS-GHLGFYKEGMF 375


>gi|238883498|gb|EEQ47136.1| hypothetical protein CAWG_05697 [Candida albicans WO-1]
          Length = 691

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 3/101 (2%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   Q LR  GIR         N G +    + +  PL    G  + +   + I     
Sbjct: 502 AEKIEQSLRANGIRVTGDYREIYNPGWKFADWELKGVPLRFEFGPKDLAGNQVTIVRRND 561

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           GK+ + ++   ++     + Q+     +L++  K+   E++
Sbjct: 562 GKKYTVKLDELDTEVPKLLDQMH---DDLLTKAKQEFDEHR 599


>gi|330807862|ref|YP_004352324.1| proline--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375970|gb|AEA67320.1| Proline--tRNA ligase (proline tRNA synthetase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 571

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R   +  G   +  P  + ++ L +     +  
Sbjct: 31  MIRKLASGLYTWLPMGLRVMRKVEAIVREEMDAAGSLEVLMPGTQPAE-LWQESGRWEEY 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D  G+   
Sbjct: 90  GPELLRIKDRHGRDFC 105


>gi|325860506|ref|ZP_08173616.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325481987|gb|EGC85010.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 649

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 3/133 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +                L    +R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYAFKVKAYLDAHDVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           + M    ++  G +++  + +  P  +I G  E + G++ ++    G++ +  ++     
Sbjct: 578 SIMD-DRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTMEAFAER 636

Query: 467 REARVAQITIPIS 479
             A VA     + 
Sbjct: 637 INAEVADQLKTLD 649


>gi|322381604|ref|ZP_08055577.1| hypothetical protein PL1_0791 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321154440|gb|EFX46743.1| hypothetical protein PL1_0791 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 456

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/244 (9%), Positives = 62/244 (25%), Gaps = 20/244 (8%)

Query: 241 VSFLSIDLE--KSMHELYELVKG---TIAGEKGFNELVVISEL---VRKSGYNSNRIKIS 292
           + F     E  +      E  +    ++  ++    L    +       +  +    K  
Sbjct: 220 LEFFCKPGEDLEWFSYWREFCRNWLLSLGMKEANMRLRDHDKEELSHYSNATSDIEYKFP 279

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFS 352
                         ++ I       E        +   G +Y                  
Sbjct: 280 FGWGELWGIADRTDFDLIRHMEHSGEDFHFHDQET---GEKY-----VPYCIEPSLGADR 331

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM----LRTAGIRAE 408
           + ++ LI A +  E    + + +           +      +   +      R       
Sbjct: 332 VTLAFLINAYEEQELDGGDSRNVLHFHPAIAPVKAAIFPLSKKLAESAGKVFRDLSQDFM 391

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +    + + G + +  D    P  I         G + ++D    ++    I   +++ E
Sbjct: 392 VEYDDAGSIGKRYRRQDEIGTPFCITYDFDSVEDGQVTVRDRDTMQQQRMPISELKAFLE 451

Query: 469 ARVA 472
           +++ 
Sbjct: 452 SKIK 455


>gi|296228691|ref|XP_002759919.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1
           [Callithrix jacchus]
          Length = 718

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 51/463 (11%), Positives = 114/463 (24%), Gaps = 86/463 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L         L +               
Sbjct: 324 FLPRGTRVYNALVAFIRAEYARRGFFEVKTPTL-----FSTKLWE-------------QS 365

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G W                E++             P                  D   + 
Sbjct: 366 GHW----------------EHYQED----MFAVQPPGSDRPASSQSDHSTRHTTDTLALK 405

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                A   M      +   + ++  D+           G L +    G      RL   
Sbjct: 406 PMNCPAHCLMFAHRPRSWRELPLRLADF-----------GALHRAEASGGLCGLTRLRCF 454

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +  D         ++  +     D           +          LS      + +   
Sbjct: 455 QQDDAHIFCTTDQLEAEIQ-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGDPCL 507

Query: 258 LVKGTIAGEKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGF 313
             +     ++   E     +L             + +   + R  +  T    ++  L F
Sbjct: 508 WDQAEQVLQQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRF 567

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             +  K +                        V      +G    ++ + +         
Sbjct: 568 D-LQYKGQAGALER-----------------PVLIHRAVLGSVERLLGVLAESCRGKWPL 609

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +   ++     +   Q L+ AG+  ++   S      +++ A   +     
Sbjct: 610 WLSPFQVVVIPVGTEQEEYARETQQSLQAAGLVCDLDADSRLTLSRRIRRAQLAHYNFQF 669

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 670 VVGQKEQSKSTVNIR--------TRDNRLLGEWSLPEAVQRLV 704


>gi|291522457|emb|CBK80750.1| glycyl-tRNA synthetase, dimeric type [Coprococcus catus GD/7]
          Length = 465

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 3/103 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV I  +        K +     L +     E       N G + +  D    
Sbjct: 365 HFHPALAPVKIGVLPLSKKLGEKAEAVYAEL-SKNWNCE--YDDRGNIGKRYRRQDEIGT 421

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P  +         G + ++D    ++   +I++  ++   ++A
Sbjct: 422 PFCVTYDFDSEEDGCVTVRDRDTMEQERVKIEDLTAYFMEKLA 464


>gi|288928013|ref|ZP_06421860.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330847|gb|EFC69431.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 654

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/460 (7%), Positives = 103/460 (22%), Gaps = 80/460 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I + +G+  + TP +   +                  
Sbjct: 263 KGLPIWLPKGTELRLRLQNMLRKIQKRFGYQEVITPHIGSKNLYVTSG------------ 310

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                + A        P  T      +  +              
Sbjct: 311 ---------------------HYAHYGKDSFQPIHTPEEDEEYMLKP-------MNCPHH 342

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
            +       +       +          K  + H     R                K   
Sbjct: 343 CEVFAWKPRSYKDLPLRIAEFGTVYRYEKSGELHGLTRVRSFTQDDAHIFCRPEQVKNEF 402

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             ++         F     +  +      N+  +     +  E    ++           
Sbjct: 403 LRVMDIIQAVFKIFHFDDFEAQISLRDPKNTTKYIGSDEVWEESEQAIIDACKEKG---- 458

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                     +  +  + E       +     ++   +     ++               
Sbjct: 459 ----------LDAKIAYGEAAFYGPKLDFMIKDAIGRRWQLGTIQVDYNLPERFKLEYTA 508

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                +    V     G   R+  ++      + P     + +    VA+  +    N+ 
Sbjct: 509 EDNTKKTPVMVHRAPFGSMERFTAVLIEHTAGHFP-----LWLIPDQVAILPISEKYNDY 563

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
            +       ++   +    + +   + +R   I+                       P  
Sbjct: 564 AQRVAKYFDSVGVRATLDVRNEKIGRKIRDNEIK---------------------RVPYM 602

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           ++ G  E + G++ ++    G++ +  ++         VA
Sbjct: 603 VVVGEKEAAEGLVSMRKQGGGEQATMSMEEFAKRINDEVA 642


>gi|260556061|ref|ZP_05828280.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260410116|gb|EEX03415.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 640

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/364 (12%), Positives = 90/364 (24%), Gaps = 20/364 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 264 FWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAENMFTTHSES 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 324 RNYAVKPMNCPCHVQVFNQGLKSY-RDLPIRLAEFGSCHRNEPSGSLHGIMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +   L +  +    E+   +        G + L  ++E 
Sbjct: 379 TQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDLAEK 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                 ++  ++       G  Y     +        +    +                 
Sbjct: 439 SLADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPVRLDAS 495

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +      +          R I  L    +       + PV    M+         
Sbjct: 496 YVTEENERDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLSPVQACVMNITDSQAEAS 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----K 448
           +     L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K
Sbjct: 555 EQVVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613

Query: 449 DLAK 452
           +L  
Sbjct: 614 NLGT 617



 Score = 40.2 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 AENMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|225684056|gb|EEH22340.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 738

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/475 (8%), Positives = 110/475 (23%), Gaps = 65/475 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  +++P +   D  + +           +F 
Sbjct: 326 GCPFLLPNGTKIINALQSLLRAEYRKRGYQEVQSPNM--YDVGIWRQSGHWAHYKDDMFK 383

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+       A                      +R        F    + +
Sbjct: 384 L-DVEKREWALKPMNCPGHA-------------VMFGHRERSYRELPLRIADFGVLHRNE 429

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                                      I +    +    R +         L    +  +
Sbjct: 430 ASGALHGLTRVRKFQQDDTHIFCTEDQIMQEIDGLFDFLRSVYGLFGFSFKLKLSTRPEK 489

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            +  L        +  + ++  L + + ++                             +
Sbjct: 490 YMGKLETW----NYAEEQLRAALTKFKGNDW---------------------------EV 518

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            E      G        + L    +           +                  +A   
Sbjct: 519 DEGDGAFYGPKIDITIQDALKREFQCATIQLDYQMPVNFKLEY-----MTGETGAKAKPA 573

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                +   P    +       +    R +   +           L + ++         
Sbjct: 574 DKTTEDAANPDAPSTSSN----EPGPGRARPVVIHRAIIGSFERFLGIIIEHFGGKWPFW 629

Query: 373 KEMGPVLIT-TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                +LI   M   +D + + +     LR   +  ++ +  +     +++         
Sbjct: 630 LSPRQILIVPVMPAVNDYVEELREI---LRGDKLNVDIDISGN-TMQKKIRSGQIAQYNF 685

Query: 432 AIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREARVAQITIPISELVSTV 485
             + G  E++   + I++      ++   +   E  R    A        LV+ +
Sbjct: 686 IFVVGAQEKATRTVNIRNRDDPSSQVKGSLVPLEEARVKLRALR--KERRLVNAL 738


>gi|224135789|ref|XP_002327304.1| predicted protein [Populus trichocarpa]
 gi|222835674|gb|EEE74109.1| predicted protein [Populus trichocarpa]
          Length = 127

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           + + Q     L  A +++E     S  F   +  A     P  ++ G  E   G+++IK+
Sbjct: 41  MEQLQKDRNELWCAKLKSEFL--ESTRFDKLIGRAKDLKIPWMVLVGDRELEIGIVKIKN 98

Query: 450 LAKGKELSR 458
           L    E S 
Sbjct: 99  LETNPEGSV 107


>gi|67538984|ref|XP_663266.1| hypothetical protein AN5662.2 [Aspergillus nidulans FGSC A4]
 gi|40743565|gb|EAA62755.1| hypothetical protein AN5662.2 [Aspergillus nidulans FGSC A4]
 gi|259484865|tpe|CBF81451.1| TPA: threonyl-tRNA synthetase, putative (AFU_orthologue;
           AFUA_4G13700) [Aspergillus nidulans FGSC A4]
          Length = 722

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 4/78 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G        +RI N +   +R+ Y   G+  ++TP +   D  + K           +F 
Sbjct: 318 GCPFLLPNGVRIFNALQSLLRSEYRKRGYQEVQTPNM--YDVGIWKTSGHWAHYKDDMFK 375

Query: 73  LQDDDGQWISLRYDLTAP 90
           L D + +  +L+      
Sbjct: 376 L-DVEKREWALKPMNCPG 392


>gi|299529723|ref|ZP_07043160.1| prolyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298722586|gb|EFI63506.1| prolyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 580

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 41/109 (37%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++   +R      G      P+++ ++ L +     ++ 
Sbjct: 31  MIKKLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAIETTMPVVQPAE-LWQETGRFEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  +QD  G+   ++    ++   +AR   +++  +       +  
Sbjct: 90  GPELLRIQDRHGRDFVIQPTSEEVVTDIARQEFKSYKQLPKNLYQIQTK 138


>gi|298291991|ref|YP_003693930.1| threonyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928502|gb|ADH89311.1| threonyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 666

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/374 (12%), Positives = 102/374 (27%), Gaps = 21/374 (5%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +   +             +D                M     A   +
Sbjct: 282 HPKGWNLFQNLVAYMRRRLAADYSEVNAPQVLDKSLWETSGHWGWYKDNMFKVQPAGDAE 341

Query: 162 RNDYHI---GINNRKILDGILEKIGLHGD--DKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
            ND       +N    +      +  + D   +L E   V R        GL  V+    
Sbjct: 342 DNDRVYALKPMNCPGHVQIFKHGLKSYRDLPMRLAEFGAVHRYEPSGALHGLMRVRGFTQ 401

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           +       +    A        I+ ++     E+ + +L    +  +  ++ ++    + 
Sbjct: 402 DDAHIFCTEEQMAAECLKINELILSTYADFGFEEIVVKLSTRPEKRVGSDEVWDHAEDVM 461

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-- 334
           E V       +  KI + I+ G   + G  +E  L   +  E Q            R+  
Sbjct: 462 ERVLTQIEAESGGKIKTGILPGEGAFYGPKFEYTLRDAIGREWQCGTTQVDFNLPERFGA 521

Query: 335 ---DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
              D    +     +             + ++               ++ T+  D D   
Sbjct: 522 FYVDADGQKKTPVMIHRAICGSMERFTGILIEHHAGHFPLWLAPVQAVVATITSDGD--P 579

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR----NCPLAIIQGTGERSRGMLQI 447
             +      R  G+R E+ L + K     + Y  R       P  I+ G  E +   + I
Sbjct: 580 YAEEIAAAARKMGLRVELDLRNEK-----INYKVREHSVAKVPALIVVGRKEAAERTVSI 634

Query: 448 KDLAKGKELSREIK 461
           + L    + +  + 
Sbjct: 635 RRLGSQNQTTLTLD 648


>gi|257459695|ref|ZP_05624804.1| prolyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257443120|gb|EEV18254.1| prolyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 572

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G  +       +  RI   IR   +  G   +   ++  +D+  K      +  K 
Sbjct: 34  QLGSGLYNFLPLGKIVLERICAVIRQEMDAAGAQEVSFSVVTSADA-WKKSGRYAKYGKE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +   +D       L  
Sbjct: 93  LLRFKDRKDNDFVLSP 108



 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 48/126 (38%), Gaps = 21/126 (16%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +      +I +   D+ ++   +   +  R  GIR  +   + + FG ++   +  
Sbjct: 467 WPRELAPFELEIIISNHKDAAAVEFAEKLYEQCRERGIRVLLDDRAER-FGVKMNDFELM 525

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV-K 486
             P A++ G                    +   ++ E    A + + ++   E++S + +
Sbjct: 526 GFPYAVLVG-------------------KALAERSVEFITRAGLKRQSVSADEILSFIER 566

Query: 487 KILQEN 492
           K++++N
Sbjct: 567 KLIEKN 572


>gi|218438508|ref|YP_002376837.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226699136|sp|B7K9K1|SYP_CYAP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218171236|gb|ACK69969.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 600

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ S+ L K     D   K    
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVRQEMNATGAQECLLPQLQPSE-LWKESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +F+L+D   + + L     ++   +AR +  ++  +       +  
Sbjct: 96  MFALEDRQERELGLGPTHEEVITFIAREMIRSYRQLPVNLYQIQTK 141



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 20/120 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +++    +D   +   +     L  AGI   +     +  G + K ++ 
Sbjct: 494 IWPVAIAPYHAIVVIPNINDPQQVEVAEKLYTELNAAGIETLLDDRDERA-GVKFKDSEL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I+ G           + L +GK         E    A      IPI E+VST++
Sbjct: 553 VGIPYRIVTG-----------RSLKEGK--------LEVVERATKKSQDIPIDEVVSTIQ 593


>gi|327314606|ref|YP_004330043.1| threonine--tRNA ligase [Prevotella denticola F0289]
 gi|326946255|gb|AEA22140.1| threonine--tRNA ligase [Prevotella denticola F0289]
          Length = 649

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 3/133 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +                L    +R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYAFKVKAYLDAHDLR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           + M    ++  G +++  + +  P  +I G  E + G++ ++    G++ +  ++     
Sbjct: 578 SIMD-DRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTMEAFAER 636

Query: 467 REARVAQITIPIS 479
             A VA     + 
Sbjct: 637 INAEVADQLKTLD 649


>gi|13471046|ref|NP_102615.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|22654133|sp|Q98LR2|SYT_RHILO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|14021790|dbj|BAB48401.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 658

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 79/257 (30%), Gaps = 8/257 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG----EKGFNELVVIS 276
           D++  F     L SE + I    LS   +    E+   +          ++ ++    I 
Sbjct: 391 DDAHIFCTEEQLASECLRINDLILSTYADFGFDEISVKLSTRPDKRVGTDEAWDHAEAIM 450

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
             V ++    +  +I ++I  G   + G  +E +L   +  E Q            R+  
Sbjct: 451 GSVLETIRTRSGNRIKTSINPGEGAFYGPKFEYVLKDAIGREWQCGTTQVDFNLPERFGA 510

Query: 337 LVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                  +            G     + +     S +      P  +      S++    
Sbjct: 511 FYIGSDSEKKQPVMVHRAICGSMERFLGILIENYSGHFPLWFAPQQVVVATITSEADGYA 570

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 L+ AG+ AE  L  ++    +++       P+ ++ G  E     + I+ L   
Sbjct: 571 TEVVAKLKAAGLLAEADL-RNEKINYKVREHSLAKVPVILVCGKREAEEQTVNIRRLGSR 629

Query: 454 KELSREIKNNESWREAR 470
            + S  +    +     
Sbjct: 630 DQESLGLAEAIAQLTEE 646


>gi|110633361|ref|YP_673569.1| threonyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|123058100|sp|Q11JM1|SYT_MESSB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110284345|gb|ABG62404.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chelativorans
           sp. BNC1]
          Length = 656

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 81/266 (30%), Gaps = 8/266 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNELVVIS 276
           D++  F     L  E + I    LS   +    E+              +  ++    I 
Sbjct: 390 DDAHIFCTEDQLAEECLKINDLILSTYADFGFEEIQVFFSTRPEKRVGSDALWDHAEEIM 449

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
             V +     +  +I + I  G   + G  ++ +L   +  + Q            R+  
Sbjct: 450 GGVLEQIAERSGGRIKTAINPGDGAFYGPKFDYVLKDAIGRQWQCGTTQVDFNLPERFGA 509

Query: 337 LVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                  +            G     + +     + +      P+ +      SD+    
Sbjct: 510 FYIDKDSEKKQPVMIHRAICGSMERFLGILIENYAGHFPLWFAPLQVVVATITSDADDYA 569

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +  TQ L+ AG+ AE  L  ++    +++       P+ ++ G  E   G + I+ L   
Sbjct: 570 RQVTQQLKAAGLTAEADL-RNEKINYKVREHSLAKVPVILVCGKREAEEGSVNIRRLGSR 628

Query: 454 KELSREIKNNESWREARVAQITIPIS 479
            + S  +    +          I  +
Sbjct: 629 DQASLLLAEAIAQLIDEATPPDIRRA 654


>gi|315187358|gb|EFU21114.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 477

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 11/104 (10%)

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +     L  AG+  EM L    + G +    + R  P+ +  G  +  +    +    
Sbjct: 305 YAKRVFARLTEAGLSVEMDLDDQNSPGWKFAEWELRGVPIRVEVGPRDMEQEKAVLVRRD 364

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
            G++ +  +               IP+  L+  ++K L    ++
Sbjct: 365 TGEKRAVSVSRLPE---------EIPV--LLEEIQKTLFRRAKD 397


>gi|319940262|ref|ZP_08014614.1| prolyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810564|gb|EFW06900.1| prolyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 619

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+  ++   +R  +E  G   +  P L  +D L +     D   + 
Sbjct: 34  QISAGVYSYLPLANRVIEKVKKIMREEFEKIGAVEMLAPALLSAD-LWRESGRYDTYGED 92

Query: 70  VFSLQDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ L++ +G    L    + T   + R   +++  +       +       ++   G  R
Sbjct: 93  LYKLKNREGSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQ-AKYRDEKRPRNGLLR 151

Query: 127 QFIQCDVDNVGSSAETADAEMCMM 150
                  D     A     ++   
Sbjct: 152 TREFIMKDGYSFHANYDSLDVTYD 175


>gi|222151594|ref|YP_002560750.1| threonyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222120719|dbj|BAH18054.1| threonyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 642

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 38/131 (29%), Gaps = 1/131 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         V   G    + R +  L         +      L      +      
Sbjct: 501 EYIGSDGEKHRPVVIHRGVISTMERFVAFLTEEYKGAYPLWLAPNQLEIIPVSNEVHYDY 560

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L++ G+R  +     K  G +++ A     P  ++ G  E     + ++   K
Sbjct: 561 ARKLYDELKSQGVRCHIDDREEK-MGYKIREAQMHKVPYQVVVGDKEIENNEVNVRQYGK 619

Query: 453 GKELSREIKNN 463
            +  + +  + 
Sbjct: 620 KESKTIDRDDF 630



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/382 (13%), Positives = 95/382 (24%), Gaps = 44/382 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +   I +     G+D + TP++   D   K     D   + +F  
Sbjct: 262 GLPLWLPNGATIRRELERYIVDKEVALGYDHVYTPIMGSVDLY-KTSGHWDHYQEDMFPP 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + + + LR                        Y+  P    E               
Sbjct: 321 MEMENEALVLRP--------------MNCPHHMMVYKNKPHSYRELPIR----------- 355

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE----KIGLHGDDK 189
             +         E    ++      G+  ND HI +   +I +  +      I ++ D K
Sbjct: 356 --IAELGMMHRYEASGAVSGLQRVRGMTLNDAHIFVRPDQIKEEFIRVVQLVIDVYKDFK 413

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
             E    L   D  +          + E       +      L  E+     +F    L+
Sbjct: 414 FKEYKFRLSYRDS-EDTEKYFQDDEMWERAQLMLKEAVDEMGLDYEEAPGEAAFYGPKLD 472

Query: 250 ---KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
              K+     E +                 E +   G     + I   ++  +E +   +
Sbjct: 473 VQVKTALGKEETLSTVQLDFLLPERFD--LEYIGSDGEKHRPVVIHRGVISTMERFVAFL 530

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            E   G   +      +    V     YD     +           I         +   
Sbjct: 531 TEEYKGAYPLWLAPNQLEIIPVSNEVHYDYARKLYDELKSQGVRCHIDDR------EEKM 584

Query: 367 SSTNNIKEMGPVLITTMDHDSD 388
                  +M  V    +  D +
Sbjct: 585 GYKIREAQMHKVPYQVVVGDKE 606


>gi|158340035|ref|YP_001521204.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158310276|gb|ABW31891.1| threonyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 439

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 59/461 (12%), Positives = 124/461 (26%), Gaps = 84/461 (18%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      + +R+   I D +R +Y+ +G         E                      
Sbjct: 54  GMVFWHPQGLRLFRSIEDFMRQVYQGHG--------FE---------------------- 83

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                       ++ +P+A  +  +          +R G                +    
Sbjct: 84  ------------EVRSPIA--LNRSLWERSRHWEKFRQGMFVVGSVEADIDDESALSVIS 129

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            +      +  A + +  +               GI +R  L G L           ++ 
Sbjct: 130 PDYALKPMSCPAHIAIYQSRKRSYRENPMRLMEFGICHRNELSGTLSGCMRLRQFVQDDA 189

Query: 194 LIVLRAIDKLDKFG--LQGVKLLLGEGRTDNSGDFTKGAN---LTSEQIDIMVSFLSIDL 248
            I  RA D   +    L  V+ +      D             L S+ +      + +  
Sbjct: 190 HIFCRASDVQREISNFLNMVQQVYVAFGYDQFSLQISLRPEQRLGSDHLWDQAESVLVKA 249

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            +S+   Y+L     A      E+ +  +L R     + ++  +   V  L +       
Sbjct: 250 VQSLGHSYKLAPNEGAFYGPKLEISLQDQLGRSWQCGTIQVDFNLPQVFELAFVNELG-- 307

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
             L  PVM  +          G                             + L+    +
Sbjct: 308 -ELERPVMLHQAILGSLERWIG-----------------------------ILLEHHSGA 337

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                    V + ++ + + + ++   +   LR  G R E+    ++    +++   +R 
Sbjct: 338 LPIWAAPTQVAVASISNKASAWAETIFF--RLRQLGARVELH-NQNRTISKKIRGLSKRK 394

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            PL  I G  E     L ++ L   K+    +   E     
Sbjct: 395 IPLIAIVGEQEAMSQRLNLRCLGALKQQEMSLAELEQKLAD 435


>gi|326562407|gb|EGE12726.1| threonyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326569116|gb|EGE19178.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 639

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 83/311 (26%), Gaps = 9/311 (2%)

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
              +       + +     ++ DY I   N      +  +      D             
Sbjct: 303 WEKSGHWDNYGEMMFTTASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHR 362

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L G+ + +     D++  F   A +  E ++ +   L +  +     +   +  
Sbjct: 363 NEPSGSLHGI-MRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                 G +EL  ++E       ++  +        G  Y     +        + +   
Sbjct: 422 RPEKRVGADELWDLAEQALADALDNAGLDWELQAGEGAFYGPKIEFSLQDCIGRVWQCGT 481

Query: 322 ---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGP 377
                                R +   +           + + ++         +     
Sbjct: 482 LQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQV 541

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V++   D  +DS+         L   G RA   L  ++  G +++       P  +I G 
Sbjct: 542 VVMNITDKQADSVGD---VVSKLNAKGYRAISDL-RNEKIGFKIRERTLERIPFMLILGD 597

Query: 438 GERSRGMLQIK 448
            E   G + ++
Sbjct: 598 KEVESGTVNVR 608



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R + ++ G+  I+TP +       K     D  
Sbjct: 255 MQEQAP-GMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKS-GHWDNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+    + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 GEMMFT-TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH 370


>gi|169797157|ref|YP_001714950.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184156915|ref|YP_001845254.1| threonyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|215484620|ref|YP_002326855.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|239500701|ref|ZP_04660011.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|301510743|ref|ZP_07235980.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|332856896|ref|ZP_08436305.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332867201|ref|ZP_08437466.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332874008|ref|ZP_08441943.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|226701398|sp|B7H005|SYT_ACIB3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238685492|sp|A3M299|SYT_ACIBT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238688031|sp|B0V5P2|SYT_ACIBY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238690968|sp|B2HTH0|SYT_ACIBC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169150084|emb|CAM87978.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183208509|gb|ACC55907.1| Threonyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|193076379|gb|ABO11043.2| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|213985706|gb|ACJ56005.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|322506811|gb|ADX02265.1| thrS [Acinetobacter baumannii 1656-2]
 gi|323516680|gb|ADX91061.1| threonyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332726950|gb|EGJ58455.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332734140|gb|EGJ65272.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332737749|gb|EGJ68641.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 640

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/364 (12%), Positives = 90/364 (24%), Gaps = 20/364 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 264 FWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAENMFTTHSES 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 324 RNYAVKPMNCPCHVQVFNQGLKSY-RDLPIRLAEFGSCHRNEPSGSLHGIMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +   L +  +    E+   +        G + L  ++E 
Sbjct: 379 TQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDLAEK 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                 ++  ++       G  Y     +        +    +                 
Sbjct: 439 SLADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPVRLDAS 495

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +      +          R I  L    +       + PV    M+         
Sbjct: 496 YVTEENERDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLSPVQACVMNITDSQAEAS 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----K 448
           +     L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K
Sbjct: 555 EQVVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613

Query: 449 DLAK 452
           +L  
Sbjct: 614 NLGT 617



 Score = 40.2 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 AENMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|145518031|ref|XP_001444893.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412326|emb|CAK77496.1| unnamed protein product [Paramecium tetraurelia]
          Length = 640

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/415 (11%), Positives = 114/415 (27%), Gaps = 44/415 (10%)

Query: 83  LRYDLTAP-----LARYVAENFDTIVFPCRTYRIG-PVFRNEKHGPGRFRQFIQCDVDNV 136
           LR + TA       AR + +N   + F      +G       + G  R R+F   +++  
Sbjct: 205 LRPE-TAQGMFLNFARLLEQNGGRVPFGAAQIGLGFRNEIAPRGGLLRCREFQMAEIEYF 263

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
               E +  +      +    +  ++       +    +   +++  ++ +        +
Sbjct: 264 VDPTEKSTFKKFNKYINLEIPLLSRQLQAEAKQHQPFKMGDAVKEGIINNETLAY---FI 320

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA---------------NLTSEQIDIMV 241
            R    L + G+  V +   + + D    ++                   L       + 
Sbjct: 321 CRTYLYLVEIGINPVNIRFRQHQADEMAHYSSDCWDAEIEMSSGWVECVGLADRSAYDLN 380

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           +      +K        V       +   +   I + ++K G    +   +       E 
Sbjct: 381 AHSEATGQKLQAARKFKVPQPRQVLQVTLDKQKIGKELKKDGMALIKYVEALPDDEKQEL 440

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                      F +  +                  +    +         + GI R++ A
Sbjct: 441 SDYFQNHEDKVFNIDGKDLTLNRQLVKFEQKT---MNVMEEKFIPHVIEPAFGIGRILQA 497

Query: 362 LKSLESSTNNIKEMGP-----------VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           +     +  +  +                I ++    +  +     T  L+  GI  +  
Sbjct: 498 IIEHSFNQRDDPQKTFFKFSPRVAPVKCSILSVVQSEEFDNVIFELTSSLKKLGISCKTD 557

Query: 411 LGSSKNFGNQLKYA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             +    G   KYA  D    P AI       +   + ++++   K++   I   
Sbjct: 558 -NAGVALGK--KYARTDEIGIPFAITVDKETLTAQSVTLREIETTKQVRVPIAEV 609


>gi|206889512|ref|YP_002249047.1| threonyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741450|gb|ACI20507.1| threonyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 617

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  M              + L     R ++ + + K  G +++ A     P  +
Sbjct: 517 WLAPVQIEVMSISEKHADYAARVYRQLINNDFRVKLNIDNEK-IGYKIRNATLNKVPYMV 575

Query: 434 IQGTGERSRGMLQIK 448
           I G  E     + ++
Sbjct: 576 IIGDKEIENNAITVR 590



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 74/254 (29%), Gaps = 13/254 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  +R  I D  ++ +   G+  + TP +   D L +     D   + ++S  + D
Sbjct: 246 WLPNGAIVRKIIEDFWKDEHLKAGYQLLYTPHIARLD-LWRKSGHLDFYRENMYSPMEID 304

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                L+  +  P       +        R+YR  P+   E     R+ +        + 
Sbjct: 305 EIAYQLKP-MNCPF------HIQVYKSELRSYRELPLRFAELGTVYRYERSGVLH-GLLR 356

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
               T D        + LE    K  D+ + I +          I    +  +       
Sbjct: 357 VRGFTQDDAHIFCTEEQLEEEIQKVLDFTVFILSTFGFTAYDIYISTRPEKYVGSIENWE 416

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +A   L     + +K      + D       G  +  +  D++         +    + E
Sbjct: 417 KATFAL----EEALKTRNLPYQIDPGEGVFYGPKIDIKIKDVLNRSWQCSTIQVDFNIPE 472

Query: 258 LVKGTIAGEKGFNE 271
               T  G+ G   
Sbjct: 473 RFDITYRGKDGKEH 486


>gi|228472826|ref|ZP_04057584.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275877|gb|EEK14643.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 649

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 35/108 (32%), Gaps = 3/108 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +    F      + + L+    +         V I  +               +L
Sbjct: 511 HRPVMIHRAPFGSMERFVAILLEHTAGNLPLWLVPEQVNILCIS--EKYEGYAHKVANLL 568

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + A +R  +    ++  G +++ A+ +  P  +I G  E     L ++
Sbjct: 569 QEADLRPHVD-NRNETIGKKIREAETQKFPYMVIVGEEEEKNATLSVR 615


>gi|225027257|ref|ZP_03716449.1| hypothetical protein EUBHAL_01513 [Eubacterium hallii DSM 3353]
 gi|224955410|gb|EEG36619.1| hypothetical protein EUBHAL_01513 [Eubacterium hallii DSM 3353]
          Length = 462

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/228 (6%), Positives = 60/228 (26%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     +      +E + I +  ++     ++       +    +        
Sbjct: 237 EWFAYWKDFCVNWLKDLGLKDEELRIRDHDKEELSFYSKATSDIEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE--- 366
              + +   ++      +          +      ++ A   ++         + ++   
Sbjct: 297 RTDYDLNCHQEVSGQDLTYFDDAEKKKYIPYVIEPSLGADRVTLAFLCAAYDEEEIKDGE 356

Query: 367 --SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +  +    + PV +  +          +     L +     E       N G + +  
Sbjct: 357 TRNVMHFHPAIAPVKVGILPLSKKLNEGAEKIYHEL-SKIYNCEFD--DRGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + ++D    ++   +I++ + +   +  
Sbjct: 414 DEIGTPYCVTYDFDSVEDGAVTVRDRDTMEQERIKIEDLKDYFAEKFN 461


>gi|168187059|ref|ZP_02621694.1| glycyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169295056|gb|EDS77189.1| glycyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 463

 Score = 50.6 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/228 (7%), Positives = 53/228 (23%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  H         +       E +   +   +     +        +    +        
Sbjct: 238 EWFHYWKNYCWKFLLDLGMTEESLRFRDHGEEELSFYSNATSDIEFLFPFGWGELWGVAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +    +      +       +  V      ++ A   ++         + LE+  
Sbjct: 298 RTDYDLKKHMEHSGQELTYLDPTTNEKYVPYVIEPSLGADRVALAFLVDAYDEEELENGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        K       L +      +    + + G + +  
Sbjct: 358 TRTVLHFHPVLAPFKAAILPLSKKLSEKALDVYAKL-SKKFN--IDYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  I           + ++D     ++   I   E + E +V 
Sbjct: 415 DEIGTPYCITVDFDTLEDNTVTVRDRDNMTQIRLSIDELEKFLEEKVQ 462


>gi|329296183|ref|ZP_08253519.1| threonyl-tRNA synthetase [Plautia stali symbiont]
          Length = 642

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 87/339 (25%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKEVMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQVRDEVNSCIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E+        N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEVDLAEALKENNIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     +  P       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPKRLDATYVGETNDRQTPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 SWLAPVQAVVMNITDGQAEYVSELTKKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++       +  +
Sbjct: 594 LVCGEKEVEAGKVAVRTRRGKDLGSMDVDVFVEKLQQEI 632



 Score = 39.8 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/205 (7%), Positives = 52/205 (25%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRTKLKEYDYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEVMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVRDEVNSCI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++    +  RA   L +   +  
Sbjct: 425 EKRIGSDEMWDRAEVDLAEALKENN 449


>gi|323446287|gb|EGB02506.1| hypothetical protein AURANDRAFT_59726 [Aureococcus anophagefferens]
          Length = 452

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 40/123 (32%), Gaps = 3/123 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        + L+S             + +  +  D+   SK           GIR
Sbjct: 300 HRAIFGSLERFFAILLESCGGDLPLWLAPTQMRLLPVTDDARDFSKA--VAAKAAQRGIR 357

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            E+  G  +    Q++ A+ +  P+  + G  E + G L ++    G   + ++      
Sbjct: 358 CEIDSGKDR-LNKQIRNAETQRVPIMCVVGEKEMASGDLAVRARTMGDLGTIDVDALFDE 416

Query: 467 REA 469
            + 
Sbjct: 417 LKD 419



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  RIR  + D+ +  +E  G++ + TP +   D L K     D   +G+F   D +
Sbjct: 54  WHPRGARIRMLMEDTWKAAHERGGYELLVTPHIANVD-LWKTSGHFDFYAEGMFDQMDVE 112

Query: 78  GQWISLRYDLTA 89
            +   L+     
Sbjct: 113 KEQYQLKPMNCP 124


>gi|15220911|ref|NP_173238.1| threonyl-tRNA synthetase, putative / threonine--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|85701287|sp|Q8GZ45|SYTC_ARATH RecName: Full=Probable threonyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9665073|gb|AAF97275.1|AC034106_18 Strong similarity to threonyl-tRNA synthetase from Arabidopsis
           thaliana gb|Y14329 and is a member of the tRNA
           synthetase PF|00587 class II
 gi|332191535|gb|AEE29656.1| threonyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 458

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/246 (12%), Positives = 69/246 (28%), Gaps = 35/246 (14%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG-YNSNRIKISSTIVRGLEYY 302
           LS   +  + +L    K     EK  ++      +    G +   +I I+ +  R  ++ 
Sbjct: 238 LSTRPKDHIGDLETWAKAENDLEKALDDFGKPWVIKEGDGAFYGPKIDITVSDARNRKFQ 297

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              +             Q      +                  + +           + L
Sbjct: 298 CATI-------------QLDFQLPACFKLKYLSEKNEMEAPVMIHSAVLGSIERMFAILL 344

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +  +            ++ ++  D  S +K     + +   G   ++   S ++     K
Sbjct: 345 EHYKGIWPFWLSPRQAIVCSLSEDCSSYAK--QVQKQINEVGYYVDID-ESDRSLRK--K 399

Query: 423 YADRRNCPL--AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            AD R+ P    ++ G  E + G + ++                   E R     + I  
Sbjct: 400 VADARDAPYNYILVVGQKEVATGQVTVR--------------LREDPEGRKDLPEMSIES 445

Query: 481 LVSTVK 486
           L+   K
Sbjct: 446 LLDEFK 451


>gi|331090802|ref|ZP_08339649.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330399910|gb|EGG79569.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 653

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/147 (10%), Positives = 41/147 (27%), Gaps = 3/147 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D    + +   +  T        L   ++              V +  +           
Sbjct: 506 DKDGEKKRPYIIHRTAMGCYERTLAWLIEKYAGLFPTWLCPEQVRVLPIS--EKYHDYAH 563

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                LR  GI+  +    ++  G +++       P  ++ G  E    ++ ++    G 
Sbjct: 564 QVLGELRANGIKCTVD-DRAEKIGYKIRETRLDKVPYMLVVGAKEEEEKVVSVRSRFLGD 622

Query: 455 ELSREIKNNESWREARVAQITIPISEL 481
           E  + +    +     +    I   E+
Sbjct: 623 EGQKSLDTFIADICKEIRTKEIRKIEV 649



 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 79/260 (30%), Gaps = 11/260 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   + +  E  G+   +TPL+   D             +G+F L
Sbjct: 260 GLPLLMPKGAAIIQTMQRWVEDEEEKRGYVRTKTPLMAKKDLYV-ISDHWGHYKEGMFVL 318

Query: 74  QD---DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            D   +  +  +LR  +T P   YV           ++YR  P    E     R     +
Sbjct: 319 GDEDKEGEEVFALRP-MTCPFQYYV------YKQSQKSYRDLPCRYGETSTLFRNEDSGE 371

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                       ++  + +      +      +     +    + + +  ++ L   D +
Sbjct: 372 MHGLTRVRQFTISEGHLVITPEQVEDEFRGCVDLAKYCLTTLGVEEDVTYRLSLADPDNM 431

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
           ++ L      D+++    + +  L  +   +       G  L  +  ++     ++   +
Sbjct: 432 DKYLGTREMWDEVEDIMRKMLNHLEIDYTEETGEAAFYGPKLDIQAKNVYGKEDTMITIQ 491

Query: 251 SMHELYELVKGTIAGEKGFN 270
               L E    +   + G  
Sbjct: 492 LDMFLAERFDMSFVDKDGEK 511


>gi|330843668|ref|XP_003293770.1| hypothetical protein DICPUDRAFT_158682 [Dictyostelium purpureum]
 gi|325075865|gb|EGC29705.1| hypothetical protein DICPUDRAFT_158682 [Dictyostelium purpureum]
          Length = 1599

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 1/102 (0%)

Query: 365  LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
            L        +     I  +   ++   +       L+ AG  AE    S      Q   +
Sbjct: 1483 LIQQQMISHKFSTPDIFVISLGTNLFMERISIVSDLQNAGFNAETMYLSDPTPEEQTDAS 1542

Query: 425  DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
                    +I      ++  +++K++ K KE          +
Sbjct: 1543 LACGAVYVVIIKEKG-AKKTIKVKNIEKKKEDDISRDEIVKF 1583


>gi|319788022|ref|YP_004147497.1| prolyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466534|gb|ADV28266.1| prolyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 565

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/160 (8%), Positives = 36/160 (22%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R      G   ++ P ++  + L +      + 
Sbjct: 31  MIRKLAAGLYTWTPLGLRVLRKVEAVVREEMNRAGAVELQLPTIQPRE-LWEETGRWGKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
              +  ++D             +     AR    ++  +                 R   
Sbjct: 90  GGQLLKIKDRKEAEYCFSPTAEEAITDFARQELSSYKQLPVNFYQIHTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F                     M          +G
Sbjct: 150 MRAREFLMKDAYSFHVSDEDLAREYENMKAAYIRVFGRLG 189


>gi|307154337|ref|YP_003889721.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306984565|gb|ADN16446.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 600

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ S+ L K     D   K    
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVREEMNAIGAQECLLPQLQPSE-LWKESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +F+L D   + + L     ++   +AR +  ++  +       +  
Sbjct: 96  MFALGDRQERELGLGPTHEEVITFIAREMIRSYRQLPLNLYQIQTK 141



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +++    +D   +   +   Q L   G+   +    ++  G + K ++ 
Sbjct: 494 IWPVAIAPYHAIVVIPDLNDPLQVETAEKLYQELNQVGVETLLDDRDARA-GVKFKDSEL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P  I+ G      G +++ + A  K     I+   S
Sbjct: 553 IGIPYRIVTGRS-LKDGKVEVVERASKKSQDIAIEEVVS 590


>gi|238855713|ref|ZP_04646009.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260665499|ref|ZP_05866346.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282934764|ref|ZP_06340004.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313471817|ref|ZP_07812309.1| threonine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238831659|gb|EEQ24000.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239528573|gb|EEQ67574.1| threonine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260560767|gb|EEX26744.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281301175|gb|EFA93479.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 643

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 63/206 (30%), Gaps = 7/206 (3%)

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
             +E+   S+ + K   +   +           Y      +        +E    +    
Sbjct: 432 ANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT-ALGNDETMSTIQLDF 490

Query: 328 VGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNN-IKEMGPVLITTM 383
           +         V +   ++ P     G    + R I  L  +             V I  +
Sbjct: 491 MLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPEQVEIIPV 550

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
           + D+      +     L   G RAE+    ++  G +++ +  +  P  ++ G  E +  
Sbjct: 551 NLDAHG-EYAKKVRDELLKHGFRAEVDF-RNEKMGYKIRESQTQKVPYTLVLGDDEMNSN 608

Query: 444 MLQIKDLAKGKELSREIKNNESWREA 469
            + ++     K+ S  +    +  +A
Sbjct: 609 AVNVRPYGTEKQESMSLDQFINELQA 634



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+  + TP+L   D+  K         + +F  
Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLDAY-KTSGHWAHYREDMFPP 317

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 318 MDMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 377

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A++  ++ D  +   I    + +   + K  D       + 
Sbjct: 378 MTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDEMW 437

Query: 186 GDDKLN 191
              +  
Sbjct: 438 ERSQKM 443


>gi|148273002|ref|YP_001222563.1| threonyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830932|emb|CAN01876.1| thrS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 684

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 41/118 (34%), Gaps = 19/118 (16%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           PV +  +    D           LR  G+R ++     +    +++   +   P  +I G
Sbjct: 579 PVQVVGIPVAEDYEEYLGGVLDRLRAEGVRVQLDTSDDR-MPKKIRTHTKARVPYQLIAG 637

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
             +R+ G +  +    G +++                  +P++E V  +   +   ++
Sbjct: 638 EDDRAAGSVSFR-FRDGTQVNG-----------------VPVAEAVERITGAIARREQ 677


>gi|22125796|ref|NP_669219.1| threonyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45442011|ref|NP_993550.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51596666|ref|YP_070857.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108807773|ref|YP_651689.1| threonyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108812050|ref|YP_647817.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145598020|ref|YP_001162096.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149365658|ref|ZP_01887693.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153950233|ref|YP_001400689.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162420291|ref|YP_001607032.1| threonyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165927513|ref|ZP_02223345.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939479|ref|ZP_02228025.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011794|ref|ZP_02232692.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210452|ref|ZP_02236487.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400748|ref|ZP_02306254.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167424849|ref|ZP_02316602.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170024059|ref|YP_001720564.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186895722|ref|YP_001872834.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218929522|ref|YP_002347397.1| threonyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837960|ref|ZP_04458119.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895121|ref|ZP_04510297.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229898521|ref|ZP_04513666.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902362|ref|ZP_04517482.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270490458|ref|ZP_06207532.1| threonine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503566|ref|YP_003567628.1| threonyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|22654122|sp|Q8ZDW5|SYT_YERPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919846|sp|Q669Z0|SYT_YERPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122979581|sp|Q1C728|SYT_YERPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122980145|sp|Q1CIG3|SYT_YERPN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225518|sp|A4TIL1|SYT_YERPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166987327|sp|A7FHG1|SYT_YERP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238687259|sp|A9R0A8|SYT_YERPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238688418|sp|B1JJ17|SYT_YERPY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238691408|sp|B2K668|SYT_YERPB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21958722|gb|AAM85470.1|AE013793_6 threonine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45436874|gb|AAS62427.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589948|emb|CAH21580.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108775698|gb|ABG18217.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Yersinia pestis
           Nepal516]
 gi|108779686|gb|ABG13744.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Yersinia pestis
           Antiqua]
 gi|115348133|emb|CAL21061.1| threonyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145209716|gb|ABP39123.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292071|gb|EDM42145.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152961728|gb|ABS49189.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162353106|gb|ABX87054.1| threonyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165912528|gb|EDR31159.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920568|gb|EDR37845.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989259|gb|EDR41560.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207632|gb|EDR52112.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167049601|gb|EDR61009.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056036|gb|EDR65814.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169750593|gb|ACA68111.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186698748|gb|ACC89377.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229680697|gb|EEO76793.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229688069|gb|EEO80140.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694326|gb|EEO84373.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701883|gb|EEO89906.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361608|gb|ACY58329.1| threonyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365651|gb|ACY62208.1| threonyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270338962|gb|EFA49739.1| threonine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294354025|gb|ADE64366.1| threonyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015090|gb|ADV98661.1| threonyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 642

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 102/356 (28%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +EL   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDELWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           ++ G  E   G + ++        +R  K+  S        + + + +L++ ++  
Sbjct: 594 LVCGDKEVESGKIAVR--------TRRGKDLGSLD------VNVVVDQLLAEIRSR 635



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHVFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA D L     +
Sbjct: 425 EKRIGSDELWTRAEDDLAAALTE 447


>gi|188994826|ref|YP_001929078.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691475|sp|B2RJD6|SYT_PORG3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188594506|dbj|BAG33481.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 653

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/114 (11%), Positives = 41/114 (35%), Gaps = 8/114 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +              + L    IR ++    ++  G +++  + +  P  +
Sbjct: 544 WLTPDQVVVLPVSERFNEYAHRVAKELNQRDIRVQVD-DRNEKVGRKIRDNELKRIPYML 602

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           I G  E     + ++     K+   ++   +    A + +  +   +++S  +K
Sbjct: 603 IVGENESREEEVSVR-----KQGEGDMGIMKITTFAELIEKEV--DDMISAWRK 649



 Score = 40.6 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  ++R R+ D ++ I +++G+  + TP +   +          +  +  F  
Sbjct: 263 GLPLWLPRGTQLRLRLEDFLKQIQKHFGYQQVITPHIGNKNLYITS-GHYAKYGQDSFRP 321

Query: 74  QD--DDGQWISLRYDLTA 89
            +   +G+   L+     
Sbjct: 322 INTPQEGEEFMLKPMNCP 339


>gi|333029961|ref|ZP_08458022.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740558|gb|EGJ71040.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 647

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/350 (10%), Positives = 92/350 (26%), Gaps = 19/350 (5%)

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
            + ++ +     + +  E  +  +  M       +       +  +  R    G + +  
Sbjct: 310 HYAKYGKDSFQPIHTPEEGEEYLLKPMNCPHHCEIYKWTPRSYRELPLRLAEFGTVYRYE 369

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
             G+     R+      D         VK             F        E    +   
Sbjct: 370 QSGELHGLTRVRGFTQDDAHIFCRPDQVKEEFLSVMDIIFIIFKALNFENFEAQISLRDP 429

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYY 302
           ++ +      E +E  +  I        L    E    + Y       +   + R  +  
Sbjct: 430 VNREKYIGSDENWEKAENAIVEACKEKGLKAKIEYGEAAFYGPKLDFMVRDALGRKWQLG 489

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T    +     P     +              D L  R    +    G    + R +  L
Sbjct: 490 T---IQVDYNLPERFNLEYTGA----------DNLKHRPVMIHRAPFGS---MERFVAVL 533

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
               +    +  + P  +  +              + L    IRA +    ++  G +++
Sbjct: 534 IEHTAGKFPLW-LTPDQVAILPISERFNDYAHEVKKYLDKNDIRASVD-DRNEKIGRKIR 591

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             + +  P  +I G  E     + ++   +G +   ++++        V 
Sbjct: 592 DNEVKRIPYMLIVGEKEAENREVSVRKQGEGDQGVIKLEDFAKKLNEEVQ 641



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL 50
           +G      K   +R R+ D ++ I + +G++ + TP +
Sbjct: 262 KGLPMWLPKGTALRLRLEDFLKKIQKEFGYEQVITPHI 299


>gi|326572997|gb|EGE22976.1| threonyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 639

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 83/311 (26%), Gaps = 9/311 (2%)

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
              +       + +     ++ DY I   N      +  +      D             
Sbjct: 303 WEKSGHWDNYGEMMFTTASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHR 362

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L G+ + +     D++  F   A +  E ++ +   L +  +     +   +  
Sbjct: 363 NEPSGSLHGI-MRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                 G +EL  ++E       ++  +        G  Y     +        + +   
Sbjct: 422 RPEKRVGADELWDLAEQALADALDNAGLDWELQAGEGAFYGPKIEFSLQDCIGRVWQCGT 481

Query: 322 ---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGP 377
                                R +   +           + + ++         +     
Sbjct: 482 LQLDFNLPERLDAEFVGESGERERPVMLHRAILGSFERFIGILIEHYAGLFPAWLAPQQV 541

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V++   D  +DS+         L   G RA   L  ++  G +++       P  +I G 
Sbjct: 542 VVMNITDKQADSVGD---VVSKLNAKGYRAISDL-RNEKIGFKIRERTLERIPFMLILGD 597

Query: 438 GERSRGMLQIK 448
            E   G + ++
Sbjct: 598 KEVESGTVNVR 608



 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ + P G          I   +   +R + ++ G+  I+TP +       K     D  
Sbjct: 255 MQEQAP-GMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKS-GHWDNY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+    + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 GEMMFT-TASEKRDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH 370


>gi|315652484|ref|ZP_07905469.1| glycyl-tRNA synthetase beta subunit [Eubacterium saburreum DSM
           3986]
 gi|315485273|gb|EFU75670.1| glycyl-tRNA synthetase beta subunit [Eubacterium saburreum DSM
           3986]
          Length = 462

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/227 (8%), Positives = 59/227 (25%), Gaps = 8/227 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +         +  +       E + + +  ++     +        +    +        
Sbjct: 237 EWFDYWRSFCRDWLKALGIKEEQMRLRDHDKEELSFYSNATTDIEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   ++      S       +  +      ++ A   ++         + LE   
Sbjct: 297 RTDYDLNRHQEVSGQDLSYFDDETSERYIPYVIEPSLGADRVTLAFLCAAYDEEILEGGE 356

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + PV I  +             ++ L +     E       N G + +  
Sbjct: 357 TRTVLHFHPALAPVKIGILPLSKKLNEGALKISEEL-SKYYNVEFD--DRGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           D    P  I       S   + ++D    +++   I   +++ E + 
Sbjct: 414 DEIGTPFCITYDFDSESDHAVTVRDRDSMEQVRIPIAELKNYFEDKF 460


>gi|255732025|ref|XP_002550936.1| threonyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240131222|gb|EER30782.1| threonyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 1059

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +++++R  Y   G+D + TP + YS  L +         + +FS + + 
Sbjct: 332 WLPHGTRIYNTLVETLREEYRKRGYDEVITPNM-YSTKLWETSGHWQNYKENMFSFEVEK 390

Query: 78  GQWISLRY 85
            +   L+ 
Sbjct: 391 -ETFGLKP 397



 Score = 37.5 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/146 (8%), Positives = 35/146 (23%), Gaps = 27/146 (18%)

Query: 356  SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT-AGIRAEMFLGSS 414
             R+   L                 I  +          Q   + L        ++ +  +
Sbjct: 931  ERMTAILTEHYKGKWPFWLSPR-QILIVPVGPKYYDYAQTLQKRLNDEHSFYCDVDVSGN 989

Query: 415  KNFGN----QL-KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                     Q+ KY          I G  E     + +++                  E 
Sbjct: 990  TLPKKIRTGQMYKY------NFIFIVGDEEEKSNSVNVRNR--------------DIPEE 1029

Query: 470  RVAQITIPISELVSTVKKILQENKEE 495
            +     + + +++  +  + Q  + +
Sbjct: 1030 QGKNAMVKVDDVIQQLLDLKQSKRSD 1055


>gi|134098578|ref|YP_001104239.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291008224|ref|ZP_06566197.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133911201|emb|CAM01314.1| threonyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 674

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 34/104 (32%), Gaps = 7/104 (6%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    + L       + LR  GIR E+     +    +++    +  P  +
Sbjct: 560 WLAPVQVVGIPIADEHLDHLDRVAKALRAKGIRVEVDASDDR-MQKKIRNHTTQKVPFLL 618

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVA 472
           + G  +     +  +    G +     +   +     W E R  
Sbjct: 619 LAGGKDVEADAVSFR-FRDGTQINGVPVDTAVAALAHWVERREN 661


>gi|12045105|ref|NP_072916.1| glycyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351155|sp|P47493|SYG_MYCGE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|3844849|gb|AAC71471.1| glycyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079054|gb|ABY79672.1| glycyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 446

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/455 (9%), Positives = 105/455 (23%), Gaps = 54/455 (11%)

Query: 17  DCPTKEIRIRNRILDSIRNIYENYGFD--PIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
           D       ++ +I  ++ N +     D   +ETP++  S+ + K                
Sbjct: 35  DFGPLGAVLKQQIKQALYNFFIKNKADVLLVETPII-LSELVWKASG------------- 80

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
                                  +    V      +               +     +  
Sbjct: 81  -----------------------HLANFVDTLVDCKSCKYRFRVDQINAEIKAKKDWNSF 117

Query: 135 NVGSSAETADAEMCMMMADTLEA--VGIKRNDYHIGINNRKILDG-ILEKIGLHGDDKLN 191
            V            +   + L    +G+  ND  +     +   G  +    +    K N
Sbjct: 118 KVNCPNCHNQNWSEVRDFNLLFQTEIGVVNNDKRLVFLRPETAQGSFINFKNILQAKKRN 177

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
               + +           G  L           ++    +  +   +  +  +   L+  
Sbjct: 178 LPFAIAQFGKSFRNEITPGNFLFRTREFEQFEIEWFCKPDDANSLFEKQLIMVEQFLQTV 237

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           +    EL+K     +          +         + +K    +    ++      E   
Sbjct: 238 LKINPELLKKHEYDQSELAHYAK--KTTDFLFNFPHGLKELWGLANRGDFDLKQHQEFSK 295

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                 + +    F         +  V   +                    + L    + 
Sbjct: 296 KSMSFFDSELNQHFLPFI----IEPAVGIERLFYALIVSSYRREIINEEEREVLSLPFDL 351

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
             E   VL        ++ S ++   +          +   ++ + G + + AD      
Sbjct: 352 CPEQIIVLPLVNKLKKEAFSVFETLAKTRWR------VCFETTGSIGKRYRKADAIGIKY 405

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A+           + I+D     +    IK    W
Sbjct: 406 AVTFDFESLEDNAVTIRDRDTLVQQRIAIKELPQW 440


>gi|293610405|ref|ZP_06692706.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292827637|gb|EFF86001.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|325124561|gb|ADY84084.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 640

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 66/242 (27%), Gaps = 15/242 (6%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    E+   +        G + L  ++E   
Sbjct: 381 DDAHIFCTKEQIGQEVADFIKLTLEVYKDFGFEEVQMKLSTRPEKRVGDDALWDMAEKSL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYD 335
               ++  ++       G  Y     +        +    +                 Y 
Sbjct: 441 ADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPERLDASYV 497

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
              +      +          R I  L    +       + P+    M+         + 
Sbjct: 498 TEDNDRDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLSPLQACVMNITDSQAEACEK 556

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----KDL 450
               L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K+L
Sbjct: 557 VVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNL 615

Query: 451 AK 452
             
Sbjct: 616 GT 617



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+   ++ +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 ADNMFTTHSEN-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|23016433|ref|ZP_00056189.1| COG0441: Threonyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 621

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 96/350 (27%), Gaps = 18/350 (5%)

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E +     +     D     +S         M    T +   +     +   + +    G
Sbjct: 270 EANDYQEVKTPQLVDFSLWEASGHADKFSESMFTIRTQDERHLAVKPMNCPCHVQIFRQG 329

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I     L    ++ E     R        G+  V+        D++  F     +TSE I
Sbjct: 330 IKSYRDLPL--RMAEFGSCHRYEPSGALHGIMRVRA----FTQDDAHIFCTEDQITSETI 383

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
                   +  +    ++        A   G +E    +E        +  ++       
Sbjct: 384 AFCQLLKEVYTDFGFTDVRVKFSDRPAKRAGSDETWDKAESALLEASKAAGLETVLNPGE 443

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGI 355
           G  Y     +  +      + +   +    V         V+    +  P       +G 
Sbjct: 444 GAFYGPKLEF-VLRDAIGRDWQCGTLQVDFVLPERLDAAYVAEDGAKKRPVMLHRAILGS 502

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               + +     +      + PV +      S++          L+ AGIR E+ L + K
Sbjct: 503 FERFLGILIENFAGRFPVWLAPVQVVVATIVSEADVFATEVAATLKAAGIRVELDLRNEK 562

Query: 416 NFGNQLKYADRR----NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
                + Y  R       P+ ++ G  E     + I+ L    +    + 
Sbjct: 563 -----INYKVREHSVAKVPVMLVVGKREAESRQVAIRRLGSQNQEIVALD 607



 Score = 44.1 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/163 (9%), Positives = 45/163 (27%), Gaps = 1/163 (0%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R   E   +  ++TP L    SL +     D+ ++ +F++
Sbjct: 246 GSVFWHKKGWTLYRAVESYMRRRLEANDYQEVKTPQLVDF-SLWEASGHADKFSESMFTI 304

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +  D + ++++        +   +   +                 +              
Sbjct: 305 RTQDERHLAVKPMNCPCHVQIFRQGIKSYRDLPLRMAEFGSCHRYEPSGALHGIMRVRAF 364

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
               +     + ++        + +     D+       K  D
Sbjct: 365 TQDDAHIFCTEDQITSETIAFCQLLKEVYTDFGFTDVRVKFSD 407


>gi|332705120|ref|ZP_08425202.1| prolyl-tRNA synthetase, family II [Lyngbya majuscula 3L]
 gi|332356070|gb|EGJ35528.1| prolyl-tRNA synthetase, family II [Lyngbya majuscula 3L]
          Length = 603

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 2/97 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++      D+  ++  +     L  AGI   +   + +  G + K AD 
Sbjct: 494 IWPVAIAPYHVIITIPNVGDTQQMAAAEKLYTQLNEAGIETLLDDRNERA-GVKFKDADL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              P  I+ G      G +++ + A  K     ++  
Sbjct: 553 IGIPYRIVTGRS-LKDGKVEVVERATHKSTELSLEEV 588



 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 42/157 (26%), Gaps = 11/157 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R   +  G      P L+ S+ L K     D   K    
Sbjct: 37  SGIYAYLPMMWRVLKKVSQIVREEMDATGAQECLLPQLQPSE-LWKESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +F+L D   + + L     ++   +A    R   +    +      +R     R      
Sbjct: 96  MFALIDRQKRELGLGPTHEEVITTVAKDMIRSYRQLPLNLYQIQTKFRDEIRPRFGLMRG 155

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F             S +     M     +     G
Sbjct: 156 REFIMKDAYSFHTDHESLKKTYQAMDQAYRNMFSRSG 192


>gi|226323777|ref|ZP_03799295.1| hypothetical protein COPCOM_01552 [Coprococcus comes ATCC 27758]
 gi|225207961|gb|EEG90315.1| hypothetical protein COPCOM_01552 [Coprococcus comes ATCC 27758]
          Length = 491

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/239 (9%), Positives = 65/239 (27%), Gaps = 9/239 (3%)

Query: 240 MVSFLSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +  F   D + +      +     +      +E V   +  ++     ++       +  
Sbjct: 255 LEFFCKPDTDLEWFAYWKKFCLDWLFSLGLKDEEVRYRDHDKEELSFYSKATTDVEFLFP 314

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           + +   +       +       +  +      ++ A    +     
Sbjct: 315 FGWGELWGIADRTDYDLTQHQNVSGQDLTYFDDETNEKYIPYVIEPSLGADRVVLAFLCA 374

Query: 359 IVALKSLES-----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + LE        +   E+ PV I  +          +    ML +     E     
Sbjct: 375 AYDEEELEDGSTRTVMHFHPELAPVKIGVLPLSKKLNEGAEKVYAML-SKYYNCEFD--D 431

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             N G + +  D    P  +         G + ++D    ++   +I++ +++ E +  
Sbjct: 432 RGNIGKRYRRQDEIGTPFCVTYDFDSEEDGAVTVRDRDTMQQERIKIEDLKAYFEKKFE 490


>gi|170781142|ref|YP_001709474.1| threonyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155710|emb|CAQ00831.1| threonine-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 684

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 41/118 (34%), Gaps = 19/118 (16%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           PV +  +    D           LR  G+R ++     +    +++   +   P  +I G
Sbjct: 579 PVQVVGIPVAEDYEEYLGGVLDRLRAEGVRVQLDTSDDR-MPKKIRTHTKARVPYQLIAG 637

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
             +R+ G +  +    G +++                  +P++E V  +   +   ++
Sbjct: 638 EDDRAAGSVSFR-FRDGTQVNG-----------------VPVAEAVERITGAIARREQ 677


>gi|218563696|ref|NP_001116258.1| threonyl-tRNA synthetase, cytoplasmic isoform 1 [Danio rerio]
 gi|158253608|gb|AAI54372.1| Zgc:92586 protein [Danio rerio]
          Length = 718

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + Y+  L +        ++ +FS + + 
Sbjct: 340 FLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNI-YNSKLWQTSGHWQHYSENMFSFEVEK 398

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 399 -EIFALKPMNCPG 410



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/124 (10%), Positives = 36/124 (29%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   +     G+  ++ L     
Sbjct: 593 ERMIAILTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQRVQKEFHKVGLMTDVDLDPGCT 652

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              +++ A        ++ G  E+S   + ++         R + +     +   A  T 
Sbjct: 653 LNKKIRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCMERLKQLKASRTR 712

Query: 477 PISE 480
              E
Sbjct: 713 NAEE 716


>gi|122891384|emb|CAM13348.1| novel prtoein similar to vertebrate threonyl-tRNA synthetase (TARS,
           zgc:92586) [Danio rerio]
          Length = 718

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + Y+  L +        ++ +FS + + 
Sbjct: 340 FLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNI-YNSKLWQTSGHWQHYSENMFSFEVEK 398

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 399 -EIFALKPMNCPG 410



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/124 (10%), Positives = 36/124 (29%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   +     G+  ++ L     
Sbjct: 593 ERMIAILTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQRVQKEFHKVGLMTDVDLDPGCT 652

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              +++ A        ++ G  E+S   + ++         R + +     +   A  T 
Sbjct: 653 LNKKIRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCMERLKQLKASRTR 712

Query: 477 PISE 480
              E
Sbjct: 713 NAEE 716


>gi|328907631|gb|EGG27395.1| proline--tRNA ligase [Propionibacterium sp. P08]
          Length = 585

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R      G   +  P L  SD   K           +F L
Sbjct: 40  GVYSWLPLGLRVLRRIEAICREEMAGIGAQEVSFPALLASDPY-KETGRWAEYGDNLFRL 98

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 99  KDRKGVDMLLGP 110



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 30/92 (32%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      +D L +       L   G+   +      + G +  
Sbjct: 477 DEKGLVWPREVAPFDVQVLATGKGTDILDEATRIASELAEVGLEVLLD-DRKASPGVKFA 535

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            ++    P +++ G      G+++++D A G+
Sbjct: 536 DSEILGVPTSVVVG-RGLKDGLVEVRDRATGE 566


>gi|313836817|gb|EFS74531.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314929774|gb|EFS93605.1| prolyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314972203|gb|EFT16300.1| prolyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 581

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  RI    R      G   +  P L  SD   K           +F L
Sbjct: 36  GVYSWLPLGLRVLRRIEAICREEMAGIGAQEVSFPALLASDPY-KETGRWAEYGDNLFRL 94

Query: 74  QDDDGQWISLRY 85
           +D  G  + L  
Sbjct: 95  KDRKGVDMLLGP 106



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 30/92 (32%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +      +D L +       L   G+   +      + G +  
Sbjct: 473 DEKGLVWPREVAPFDVQVLATGKGTDILDEATRIASELAEVGLEVLLD-DRKASPGVKFA 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            ++    P +++ G      G+++++D A G+
Sbjct: 532 DSEILGVPTSVVVG-RGLKDGLVEVRDRATGE 562


>gi|264676905|ref|YP_003276811.1| prolyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207417|gb|ACY31515.1| prolyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 580

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 41/109 (37%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G  +     +R+  ++   +R      G      P+++ ++ L +     ++ 
Sbjct: 31  MIKKLGAGIYNYMPMGLRVIRKVEAIVREEMNRAGAIETTMPVVQPAE-LWQETGRFEKM 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  +QD  G+   ++    ++   +AR   +++  +       +  
Sbjct: 90  GPELLRIQDRHGRDFVIQPTSEEVVTDIARQEFKSYKQLPKNLYQIQTK 138


>gi|51473574|ref|YP_067331.1| prolyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81826313|sp|Q68WZ3|SYP_RICTY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|51459886|gb|AAU03849.1| Proline translase [Rickettsia typhi str. Wilmington]
          Length = 428

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 45/162 (27%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I + +R+     G   +  P ++ +    +     +  
Sbjct: 31  MIMKQASGLYTWLPLGLKVLKNIENIVRSNMNKVGALEVLMPCIQPAHLWIES-GRFEYY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +   QD     +       D+   + R   +++  +       +         R   
Sbjct: 90  GKEMLKFQDRHDNTLLFGPTNEDMITDIFRRNIKSYKDLPKNLYHIQWKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F        D    +A     +M     +T   +G+ 
Sbjct: 150 MRGREFLMKDAYSFDINQENAVNTYNKMYKAYINTFRDLGVF 191



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 1/102 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++      LI    HD+  +       + L    I        ++  G++    D 
Sbjct: 327 IWPFSVAPFKVSLINLNIHDNKCVELAAKTDKELSNKNIEVLYDDTEAR-PGSKFATHDL 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P  +I G  + +  ++++KD   G     EI+N  ++  
Sbjct: 386 IGSPYQVIIGPKKAANNIVELKDRKTGVLEDIEIENLINYIR 427


>gi|82914985|ref|XP_728923.1| glycyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485606|gb|EAA20488.1| glycyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 796

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/113 (10%), Positives = 35/113 (30%), Gaps = 1/113 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    S           + ++ ++ +     +    +L    I  ++   SS + G +  
Sbjct: 666 ERHYLSLPYALSPIKCSVLSISNNKEFYPYIKQIQTILSENNISCKLD-NSSVSIGKKYA 724

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             D    P A+           + ++D     ++   I        + ++Q +
Sbjct: 725 RIDEIGIPFAVTIDFQTLKDKTITLRDRDSMLQIRVNISEVSDIINSLLSQKS 777


>gi|270290317|ref|ZP_06196542.1| prolyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270281098|gb|EFA26931.1| prolyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 571

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         ++  +I   IR          + TP +  ++ L K     +   + 
Sbjct: 34  QISAGMYAYLPMAYKVMEKIKRIIREEMTAIDAVEMLTPAVLPAE-LWKKSGRYETYGQE 92

Query: 70  VFSLQDDDGQWISLRY 85
           ++  ++   +   L  
Sbjct: 93  LYKFKNRHDRDFILGP 108



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 2/106 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              NI      +I     + + +         L  AG    +     +  G +   +D  
Sbjct: 466 WPKNIAPFDVHVIPVNAKNDEQMQVADQINTELVAAGYDVLIDDRKERA-GVKFADSDLI 524

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             PL +  G    S G++++K    G+ +  ++   ++  E  + Q
Sbjct: 525 GIPLRVTVGKK-ASEGIVEVKLRQTGETVEVKLAELKNTVEILLNQ 569


>gi|297250596|ref|ZP_06864620.2| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838509|gb|EFH22447.1| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 648

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPIQMVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ +          Q  I    LV+ 
Sbjct: 605 VVGDKEKQENKVAVR------RKAEDLGSLNVDDFVAQLQQEIT-DALVNH 648



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 272 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 330 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 381


>gi|259507396|ref|ZP_05750296.1| threonine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|259165021|gb|EEW49575.1| threonine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 699

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 40/118 (33%), Gaps = 9/118 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    D +   +     LR  G RAE+     +    +++       P  +
Sbjct: 586 WLAPHQVVGIPVAEDFIPHLEKVVDKLRARGFRAEVDTSDDR-MQKKIRTHTTGKIPFML 644

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELVSTVK 486
           + G  +     +  + L  G +     +   ++   +W   R      P  E ++ ++
Sbjct: 645 LAGGRDVEADAVSFRFL-DGTQVNGVPVDEAVELISTWILERNNTQ--PSEETIAALR 699



 Score = 37.1 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            G          +R  + +  R  +   G+  + TP    SD   K         +G+F
Sbjct: 297 SGLPVFHPNGAIVRLEMEEHSRRRHIQAGYSFVNTPHATKSDLFEKS-GHLGFYKEGMF 354


>gi|212223791|ref|YP_002307027.1| glycyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008748|gb|ACJ16130.1| glycyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 567

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       I+ +I   IR  ++  GF  +ETP +          
Sbjct: 29 RGFYDYGPLGATIKRKIEQKIREAFQREGFFELETPDITPEKVFIASG 76



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 26/99 (26%), Gaps = 2/99 (2%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  V +  +       S      + L+ AG  A          G +    D    P
Sbjct: 466 KDMAPIEVAVLPLVAKEPLKSIAYEVFRKLQKAGFIA--VYDEKDTIGRRYIRYDEIGTP 523

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             +         G + I+D    +++  +I+        
Sbjct: 524 YCVTIDNQTPEDGTVTIRDRDTREQVRVKIEELPEKLRE 562


>gi|119719726|ref|YP_920221.1| prolyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|152112960|sp|A1RYD8|SYP_THEPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119524846|gb|ABL78218.1| prolyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 482

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 73/263 (27%), Gaps = 30/263 (11%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL I+   +     E +      E   N   VI E +        R            Y
Sbjct: 156 EFLWIEAHDAFATHEEAL--NQIREDMENSRKVIWEKLGIPFLFLRRPPWDKFSGAEDTY 213

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
               +        + +       F         D    R              I+  ++A
Sbjct: 214 AADTIMPDGRVLQISSTHDLGQRFAKAFNVTFLDKDGKRKYVWQTCYGPGIWRITAALIA 273

Query: 362 LKSLESSTNNIKEMGPVLITTMDH------DSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           +   +        + P+ +  +            L K +    M+R AG R  +      
Sbjct: 274 IHGDDKGLVLPMNVAPIQVVIVPIYYKESDKERVLEKCRKLEAMIREAGYRVYLDAREEY 333

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQ 473
             G +    + +  P+ +  G  E   G + +  +DL   +                   
Sbjct: 334 TPGWKFNDWELKGVPVRLEVGVREVETGTVTVFRRDLRVKE------------------- 374

Query: 474 ITIPISELVSTVKKILQENKEEI 496
             +  SEL+S ++K+  +  EE+
Sbjct: 375 -KVADSELISHIRKLENDILEEL 396


>gi|73919784|sp|Q8FPJ3|SYT_COREF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 694

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 40/118 (33%), Gaps = 9/118 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    D +   +     LR  G RAE+     +    +++       P  +
Sbjct: 581 WLAPHQVVGIPVAEDFIPHLEKVVDKLRARGFRAEVDTSDDR-MQKKIRTHTTGKIPFML 639

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELVSTVK 486
           + G  +     +  + L  G +     +   ++   +W   R      P  E ++ ++
Sbjct: 640 LAGGRDVEADAVSFRFL-DGTQVNGVPVDEAVELISTWILERNNTQ--PSEETIAALR 694



 Score = 37.1 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            G          +R  + +  R  +   G+  + TP    SD   K         +G+F
Sbjct: 292 SGLPVFHPNGAIVRLEMEEHSRRRHIQAGYSFVNTPHATKSDLFEKS-GHLGFYKEGMF 349


>gi|304384864|ref|ZP_07367210.1| proline--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304329058|gb|EFL96278.1| proline--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 571

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         ++  +I   IR          + TP +  ++ L K     +   + 
Sbjct: 34  QISAGMYAYLPMAYKVMEKIKRIIREEMTAIDAVEMLTPAVLPAE-LWKKSGRYETYGQE 92

Query: 70  VFSLQDDDGQWISLRY 85
           ++  ++   +   L  
Sbjct: 93  LYKFKNRHDRDFILGP 108



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 2/106 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              NI      +I     + + +         L  AG    +     +  G +   +D  
Sbjct: 466 WPKNIAPFDVHVIPVNAKNDEQMQVADQINTELVAAGYDVLIDDRKERA-GVKFADSDLI 524

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             PL +  G    S G++++K    G+ +  ++   ++  E  + Q
Sbjct: 525 GIPLRVTVGKK-ASEGIVEVKLRQTGETVEVKLAELKNTVEILLNQ 569


>gi|34540737|ref|NP_905216.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|73919814|sp|Q7MVQ5|SYT_PORGI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|34397051|gb|AAQ66115.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 653

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/114 (11%), Positives = 41/114 (35%), Gaps = 8/114 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +              + L    IR ++    ++  G +++  + +  P  +
Sbjct: 544 WLTPDQVVVLPVSERFNEYAHRVAKELNQRDIRVQVD-DRNEKVGRKIRDNELKRIPYML 602

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           I G  E     + ++     K+   ++   +    A + +  +   +++S  +K
Sbjct: 603 IVGENESREEEVSVR-----KQGEGDMGIMKITTFAELIEKEV--DDMISAWRK 649



 Score = 40.6 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  ++R R+ D ++ I +++G+  + TP +   +          +  +  F  
Sbjct: 263 GLPLWLPRGTQLRLRLEDFLKQIQKHFGYQQVITPHIGNKNLYITS-GHYAKYGQDSFRP 321

Query: 74  QD--DDGQWISLRYDLTA 89
            +   +G+   L+     
Sbjct: 322 INTPQEGEEFMLKPMNCP 339


>gi|302552824|ref|ZP_07305166.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302470442|gb|EFL33535.1| threonyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 416

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R+ + + +R      G+  + +P+L   +   +     D  ++ +F  
Sbjct: 33  GLPYWLPDGAIVRHTLEEYVREAERRAGYRHVYSPVLGKRELY-EISGHWDHYSEDMFPP 91

Query: 74  QDDDGQWISLRYDLTA 89
            +   + + LR  L  
Sbjct: 92  MELGAEQVLLRPSLCP 107



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +  +    +         +  R  G+RAE+   +      +++ A     P 
Sbjct: 308 PPWLAPVQLAILPVADEQAEHAHELARRARDLGLRAEVADPAEGTLAARIRAARL--VPY 365

Query: 432 AIIQGTGERSRGMLQIKDLAKG 453
             + G  E + G++ ++ L  G
Sbjct: 366 QAVIGAREAAAGLVAVR-LRDG 386


>gi|291327048|ref|ZP_06126787.2| threonine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311980|gb|EFE52433.1| threonine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 653

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 95/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y +   N      I  +      D      
Sbjct: 308 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 367

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     +       +
Sbjct: 368 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQILSEVTSCIEMIYDVYATFGFEK 426

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +   S  I+       G  Y     +       
Sbjct: 427 IVVKLSTRPEKRIGTDEMWDRAEEDLANALKSKGIEFEYQPGEGAFYGPKIEFTLYDCLD 486

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 487 RAWQCG-TVQLDFFLPGRLTASYVGENNERIVPVMIHRAVLGSLERFIGILTEEYAGFFP 545

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P  +  M+         Q     L++ GIRA+  L  ++  G +++    R  P  
Sbjct: 546 TWLAPQQVVVMNITDSQADYVQELVSKLQSVGIRAKADL-RNEKIGFKIREHTLRRVPYM 604

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  E  R  ++ Q+ 
Sbjct: 605 LVCGDKEVESGKVAVRTRRGKDLGSLDVNEFMTKLLEEIRSRQLNQME 652



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/197 (8%), Positives = 51/197 (25%), Gaps = 11/197 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G A        I   +   +R   + Y +  ++ P       L +     D  
Sbjct: 267 MQEEAP-GMAFWHNDGWTIFRELETFVRTKLKAYNYQEVKGP-FMMDRVLWEKTGHWDNY 324

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 325 KDAMFT-TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 383

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +        +    +      + I+ K+    
Sbjct: 384 LMRVRGFTQDDAHIFCTEEQILSEVTSCI--------EMIYDVYATFGFEKIVVKLSTRP 435

Query: 187 DDKLNERLIVLRAIDKL 203
           + ++    +  RA + L
Sbjct: 436 EKRIGTDEMWDRAEEDL 452


>gi|115532348|ref|NP_001040689.1| Prolyl tRNA Synthetase family member (prs-2) [Caenorhabditis
           elegans]
 gi|3880329|emb|CAB04884.1| C. elegans protein T27F6.5a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 454

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 28/85 (32%), Gaps = 1/85 (1%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  +        +GF        R+ +++   +   ++N G   I  P++  +  L +  
Sbjct: 25  MLVENGFILPTAKGFYSLLPLGQRVIDKLCRILDVEFQNSGALKIAMPIV-GTQQLWEKT 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              +     +    D     + L+ 
Sbjct: 84  GRWEAMGPEMIRFHDRQQNHMCLQP 108


>gi|218458539|ref|ZP_03498630.1| threonyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 104

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           S++ +      + LR AG+  E     ++    +++       P+ I+ G  E     + 
Sbjct: 4   SEADAYGLEVAEALREAGLNVETDF-RNEKINYKIREHSVTKVPVIIVCGRKEAEERTVN 62

Query: 447 IKDLAKGKELSREIKNNES 465
           I+ L    ++S  +     
Sbjct: 63  IRRLGSQDQVSMGLDAAVE 81


>gi|262369846|ref|ZP_06063173.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262314885|gb|EEY95925.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 640

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/355 (11%), Positives = 88/355 (24%), Gaps = 15/355 (4%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 264 FWHPNGWTIYQVLEQYMRKVQQDNGYLEIRTPQVVDFTLWEKSGHAANYADGMFTTHSES 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 324 RNYAIKPMNCPCHVQVFNQGLKSY-RDLPIRLAEFGSCHRNEPSGSLHGIMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +   L +  +    ++   +        G + L  ++E 
Sbjct: 379 TQDDAHIFCTKEQIGQEVADFIQLTLDVYKDFGFEDVQMKLSTRPEKRVGDDALWDMAEK 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                 ++  ++       G  Y     +        +    +                 
Sbjct: 439 SLADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPERLDAS 495

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +      +          R I  L    +       + P+    M+         
Sbjct: 496 YVTEDNDRDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLTPIQACVMNITDSQAEAC 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +     L+  G+RA   L  ++  G +++       P  ++ G  E   G + ++
Sbjct: 555 ESVVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVR 608



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIRTPQVVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
             G+F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 ADGMFTTHSES-RNYAIKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|225570967|ref|ZP_03779990.1| hypothetical protein CLOHYLEM_07071 [Clostridium hylemonae DSM
           15053]
 gi|225160429|gb|EEG73048.1| hypothetical protein CLOHYLEM_07071 [Clostridium hylemonae DSM
           15053]
          Length = 473

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/228 (7%), Positives = 57/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +   +     +      ++ V   +   +   + +        +    +        
Sbjct: 248 EWFNYWKKFCLNWLETLGLKDDEVRYRDHSPEELSHYSNATTDIEYLFPFGWGELWGVAD 307

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +       S     + +  +      ++ A    +         + LE   
Sbjct: 308 RTNYDLTQHQNVSKQDMSYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGD 367

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + P+ +  +          +     L +     E       N G + +  
Sbjct: 368 MRTVLHFHPALAPIKVGVLPLSKKLNEGAEKVYAQL-SRKYNCEFD--DRGNIGKRYRRQ 424

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + ++D    ++   +I+  ES+   +  
Sbjct: 425 DEIGTPFCVTYDFESEEDGAVTVRDRDTMEQERVKIEELESYFAKKFE 472


>gi|332251676|ref|XP_003274972.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 2
           [Nomascus leucogenys]
          Length = 756

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 47/147 (31%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 607 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 666

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 667 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 726

Query: 453 ---GKE-LSREIKNNESWREARVAQIT 475
              G+  +S  I+  +  +++R  Q  
Sbjct: 727 KVHGERTISETIERLQQLKQSRSKQAE 753



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 60/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          +  +FS + + 
Sbjct: 378 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSDNMFSFEVEK 436

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 437 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 482

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 483 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSIFGFSFKLNLSTRPEKFLGDI 542

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 543 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 590


>gi|205373425|ref|ZP_03226229.1| prolyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 494

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 1/71 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+  ++   IR   EN G   +  P L+ ++ L +           +  
Sbjct: 37  SGIYSFLPLGKRVLAKVEQIIREEMENAGVVEMFMPALQQAE-LWQESGRWYTYGSELMR 95

Query: 73  LQDDDGQWISL 83
           ++D  G+  +L
Sbjct: 96  MKDRHGREFAL 106


>gi|167037771|ref|YP_001665349.1| glycyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039989|ref|YP_001662974.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256751965|ref|ZP_05492835.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914079|ref|ZP_07131395.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724688|ref|YP_003904439.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320116186|ref|YP_004186345.1| glycyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166854229|gb|ABY92638.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856605|gb|ABY95013.1| glycyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256749170|gb|EEU62204.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889014|gb|EFK84160.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581749|gb|ADN55148.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319929277|gb|ADV79962.1| glycyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 462

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/253 (11%), Positives = 64/253 (25%), Gaps = 24/253 (9%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +F+    E    EL    K     E          + + + G     ++        L 
Sbjct: 212 GNFIFRTREFEQMELEFFCKPGEDMEWFSYWRKYCMDWLLEFGLKEENLRFRDHKKEELS 271

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----------YDGLVSRFKGQNVPATG 350
           +Y+    +    FP    +   +   +     +          Y   V+  K        
Sbjct: 272 HYSTATTDIEYNFPFGWGELWGIANRTDFDLRQHMEHSGVDLSYMDPVTGEKYIPYCIEP 331

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLI-----------TTMDHDSDSLSKYQMYTQM 399
                  ++  L               V++             +                
Sbjct: 332 SVGVDRLMLAFLIDAYEEEELEDGETRVVLRLHPALAPIKAAVLPLSKKLSENAYKLYDQ 391

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR    +  +    + + G + +  D    P  I       +   + I+D    +++  +
Sbjct: 392 LRN---KFVVDYDETGSIGKRYRRQDEIGTPFCITYDFDSENDHCVTIRDRDTMQQVRIK 448

Query: 460 IKNNESWREARVA 472
           I+  E + E R+ 
Sbjct: 449 IEEVEKYLEERLN 461


>gi|163758397|ref|ZP_02165485.1| ATP phosphoribosyltransferase regulatory subunit [Hoeflea
           phototrophica DFL-43]
 gi|162284686|gb|EDQ34969.1| ATP phosphoribosyltransferase regulatory subunit [Hoeflea
           phototrophica DFL-43]
          Length = 381

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/353 (12%), Positives = 103/353 (29%), Gaps = 56/353 (15%)

Query: 44  PIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIV 103
            ++ P+++ ++       ++ R  + +F  + + G+ + LR + T P+ R          
Sbjct: 32  RVDIPVIQPAEPFLDMAGEDLR--RRIFLTESETGESLCLRPEFTIPVCRAHIAESVGTP 89

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETA-------------------- 143
                       R +                +   +   A                    
Sbjct: 90  RRYSYLGKVFRQRRDGANEFFQAGVEDLGEPDEARADARAVSDARTLVSSFAPGNALTVT 149

Query: 144 --DAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL------- 194
             D  +   +   L      +        N + L+ ++ ++    +    +         
Sbjct: 150 IGDQSVFEAVVAGLGLPAGWQKRLIHAFGNEQALNAMIARLASPDESAALDDTVAGFLAA 209

Query: 195 -------IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
                    + ++ +   +     +                   L+ + +D + +FL++D
Sbjct: 210 GDASGLEKHIESVMEATGYSTHASRSPAEITARLMDKQALASTRLSPDALDALKTFLALD 269

Query: 248 LEKSMHELYELVKGTIA-----GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           +   +    E +    +                 + + + G + + I   +   R L+YY
Sbjct: 270 VP--LDRAAETLAAFASSAGLDIRSAQTSFEARLDALSERGEDLSSIHWRAAFGRPLDYY 327

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG-LVSRFKGQNVPATGFSIG 354
           TG V+E   G               + GGGRYD  +        +PA GFS+ 
Sbjct: 328 TGLVFEIAAG----------GANLVLAGGGRYDRLMALLGAQAPIPAVGFSLW 370


>gi|298250750|ref|ZP_06974554.1| threonyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297548754|gb|EFH82621.1| threonyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 624

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 16/117 (13%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQML--------RTAGIRAEMFLGSSKNFGNQLKYAD 425
            + PV    +      L       Q L        R + IR E+   + ++   +++ A 
Sbjct: 512 WLSPVQAMIIPIADRHLDYAYQVKQSLLDVRLSSARES-IRVEVD-EARESMQKKIRNAQ 569

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN-ESWREARVAQITIPISEL 481
            +  P  ++ G  E   G + ++    G      +     S    R+ Q  +  ++L
Sbjct: 570 LQKVPYMLVLGDKEAENGEVNVRH-RSG----VNLGTLSVSALAERIKQEILTRNDL 621



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/233 (7%), Positives = 64/233 (27%), Gaps = 10/233 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R+ + + ++++ E  G+  +  P +  +D   K     ++  + +F +
Sbjct: 234 GLPLFTPKGTLVRDLLEEFVQSLQEPLGYQRVHIPHITKNDLY-KTSGHWEKFQEDIFHV 292

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
               G+   ++        +  A    +                ++             +
Sbjct: 293 SGKSGEDFCMKPMNCPHHTQIYASRMRSYRELPIRLSEVTTVYRDELPGTLHGLSRVRAI 352

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +       ++   +      +      + + +  R         + L  ++   + 
Sbjct: 353 TQDDAHVFCTPDQVQEEVLRIYSIIENFYKPFGMTLAVR---------LSLWDEEHPEKY 403

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           L      +   +     +++   E   +       G  +    +D +     +
Sbjct: 404 LGTPELWNSAQEQLRAVLRMKGIEWVEEVGEAAFYGPKIDFTALDALERTWQL 456


>gi|153810740|ref|ZP_01963408.1| hypothetical protein RUMOBE_01124 [Ruminococcus obeum ATCC 29174]
 gi|149833136|gb|EDM88218.1| hypothetical protein RUMOBE_01124 [Ruminococcus obeum ATCC 29174]
          Length = 464

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/229 (7%), Positives = 62/229 (27%), Gaps = 10/229 (4%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     ++     ++ V   +  ++     ++       +    +        
Sbjct: 237 EWFAYWKKFCLDWLSSLGLKDDEVRYRDHDKEELSFYSKATTDVEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI---VALKSLE 366
              + +   +       +     +    +      ++ A    +           L + +
Sbjct: 297 RTDYDLTQHQNVSGQDLTYFDDEKKQKYIPYVIEPSLGADRMVLAFLCSAYDEEVLDAEK 356

Query: 367 SS----TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +      +    + PV I  +          +   Q L +     E       N G + +
Sbjct: 357 NDVRTVLHFHPVLAPVKIGVLPLSKKLNEGAEKIFQKL-SKKYNCEFD--DRGNIGKRYR 413

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             D    P  I       + G + ++D    +++  +I+  E++   + 
Sbjct: 414 RQDEIGTPFCITYDFESENDGAVTVRDRDTMEQVRVKIEELEAYFADKF 462


>gi|194206357|ref|XP_001491149.2| PREDICTED: similar to threonyl-tRNA synthetase-like 2 [Equus
           caballus]
          Length = 754

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 40/148 (27%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K   V      +G    ++A+ S          + P  +  +         
Sbjct: 605 TYVSKDGDDKKNPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 664

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               +      G  A++ L  S     +++ A        ++ G  E++   + ++    
Sbjct: 665 ALQVSNEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNVRTRDN 724

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  + +     +      T+   E
Sbjct: 725 KIHGEISVTSAIDKLKHLKKSRTLNAEE 752



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + Y+  L +        ++ +F+  D +
Sbjct: 376 FLPRGAFIYNTLMDFIREEYHQRNFTEVLSPNM-YNSKLWEASGHWQHYSENMFTF-DIE 433

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 434 KDTFALKPMNCPGHCLMFAHR 454


>gi|166033170|ref|ZP_02235999.1| hypothetical protein DORFOR_02892 [Dorea formicigenerans ATCC
           27755]
 gi|166027527|gb|EDR46284.1| hypothetical protein DORFOR_02892 [Dorea formicigenerans ATCC
           27755]
          Length = 480

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 19/128 (14%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
             ++  +   +I    H    L K       L+ AG R ++   S K+ G +    +   
Sbjct: 286 PPHLAPVECRVIPIAQHKEGVLEKANELLDELKKAGYRVKID-DSEKSPGWKFSEQEILG 344

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            P  I  G  +     + +                   R     +I + + E+ + +++I
Sbjct: 345 IPTRIEIGPKDIENNQVVV------------------VRRDTREKIVVSLDEITTKLREI 386

Query: 489 LQENKEEI 496
           L+  ++++
Sbjct: 387 LETIQQDM 394


>gi|154505898|ref|ZP_02042636.1| hypothetical protein RUMGNA_03440 [Ruminococcus gnavus ATCC 29149]
 gi|153793916|gb|EDN76336.1| hypothetical protein RUMGNA_03440 [Ruminococcus gnavus ATCC 29149]
          Length = 463

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/228 (7%), Positives = 61/228 (26%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +         ++     ++ V   +   +     ++       +    +        
Sbjct: 238 EWFNYWKSFCLNWLSSLGLKDDEVRYRDHDAEELSFYSKATTDVEFLFPFGWGELWGIAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   ++      +     + +  +      ++ A    +         + LE   
Sbjct: 298 RTDYDLTQHQEVSKQDLTYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + PV I  +          +     L +     E       N G + +  
Sbjct: 358 TRTVLHFHPALAPVKIGVLPLSKKLNEGAEKVFAEL-SKTYNCEFD--DRGNIGKRYRRQ 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + ++D    ++   +I++ +++ E +  
Sbjct: 415 DEIGTPFCVTYDFDSEEDGAVTVRDRDTMEQERVKIEDLKAYFEKKFE 462


>gi|295135607|ref|YP_003586283.1| prolyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294983622|gb|ADF54087.1| prolyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 492

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 71/275 (25%), Gaps = 29/275 (10%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E +  T+     + E       V             +   R    
Sbjct: 168 EFLWQEGHTAHATRQEALAETMQMNDIYAEF------VENFMATPVIKGAKTENERFAGA 221

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G            ++  G            +RL+ A
Sbjct: 222 EETYCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFATKEGGLEHVWATSWGVSTRLMGA 281

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +    + L +         + LR  GI  +    
Sbjct: 282 LVMTHSDDKGLVLPPKLAPIQVVIVPIYKSEEQLDQISDVANGLVKDLRAKGISVKFDNR 341

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSR------------ 458
            +   G +    + +  P+ +  G  +  +G +++  +D    + +              
Sbjct: 342 DTHKPGWKFAQYELQGVPVRLAIGPKDIEKGTVELARRDTLTKEFVEMDGVVEKVVALME 401

Query: 459 EIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           EI+     +        I   +     K IL++  
Sbjct: 402 EIQETLYHKAKNFRDEHITKVDSFDEFKAILKKKG 436


>gi|282599730|ref|ZP_05971662.2| threonine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568410|gb|EFB73945.1| threonine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 653

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 94/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y +   N      I  +      D      
Sbjct: 308 FMMDRVLWERTGHWENYKDAMFTTSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 367

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     +       +
Sbjct: 368 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQILSEVTSCIEMIYDVYSTFGFEK 426

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +++   +E    +   S  I+       G  Y     +       
Sbjct: 427 IVVKLSTRPEKRIGTDDMWDTAEADLANALKSKGIEFEYQPGEGAFYGPKIEFTLYDCLD 486

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     +  P       +G     + + + E +    
Sbjct: 487 RAWQCG-TVQLDFFLPGRLNASYVGENNERITPVMIHRAVLGSLERFIGILTEEYAGFFP 545

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P  +  M+         Q     L++ GIRA+  L  ++  G +++    R  P  
Sbjct: 546 TWLAPQQVVVMNITDTQAEYVQELVNKLQSVGIRAKADL-RNEKIGFKIREHTLRRVPYM 604

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  +  R  ++ Q+ 
Sbjct: 605 LVCGDKEVESGKVSVRTRRGKDLGSLDVDEFMTKLLKEIRSRQLNQME 652



 Score = 39.8 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G A        I   +   +R   ++Y +  ++ P       L +     +  
Sbjct: 267 MQEEAP-GMAFWHNDGWTIFRELETFVRTKLKSYNYQEVKGP-FMMDRVLWERTGHWENY 324

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 325 KDAMFT-TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 383

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   +E +
Sbjct: 384 LMRVRGFTQDDAHIFCTEDQILSEVTSCIEMI 415


>gi|89053551|ref|YP_509002.1| prolyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|114152201|sp|Q28TI5|SYP_JANSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88863100|gb|ABD53977.1| prolyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 452

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 1/75 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  RI   +       G  P+  P L+ +D   K     D  
Sbjct: 31  MIKQASAGIYSWLPLGYKVLKRIERIVHEEQIRAGHIPMLMPTLQSADLWQKS-GRFDAY 89

Query: 67  NKGVFSLQDDDGQWI 81
              +  L+D   + +
Sbjct: 90  GPEMLRLKDRHDRDM 104


>gi|72381873|ref|YP_291228.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|123759915|sp|Q46LV3|SYT_PROMT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72001723|gb|AAZ57525.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus
           marinus str. NATL2A]
          Length = 641

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 52/435 (11%), Positives = 102/435 (23%), Gaps = 87/435 (20%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   + D IR     Y +  +++P +       K     D+  + +F+ 
Sbjct: 261 GMVFWHPKGWTIYRILEDFIRETITKYDYQEVKSPQVVDRSLWEKS-GHWDKFKEDMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                         T        EN +  + P        +F             +    
Sbjct: 319 --------------TTS------ENREYAIKPMNCPCHIQIFNQGLKSYRDLPIRLSEFG 358

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +    A   +  +     +   I   D  I    +  +D + E     G D     
Sbjct: 359 SCHRNEPSGALHGLMRVRNFVQDDAHIFCTDEQIQEEVQNFIDLVFEVYKTFGFD----- 413

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                    L K   + VK +  +   D S      A  +                K + 
Sbjct: 414 -------SILIKLSTRPVKRVGSDDIWDKSEKALSEALDS----------------KGLD 450

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
                 +G   G K    L      V + G       +                      
Sbjct: 451 WSLLPGEGAFYGPKIEFSLKDCLNRVWQCGTIQVDFSMPQR------------------- 491

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
                                D    +     +           + + +++   +     
Sbjct: 492 ---------------LNASYIDITGRKQTPVMLHRAILGSFERFIGILIENYSGNFPTWL 536

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               + I  M     +          L   G RAE+ +  ++  G +++    +  P  I
Sbjct: 537 SP--IQIMIMGITDRNNEACFTAKDKLVDFGFRAEIDI-RNEKVGFKIREHTMQRIPFLI 593

Query: 434 IQGTGERSRGMLQIK 448
           I G  E     + ++
Sbjct: 594 IIGDKEEENSEISVR 608


>gi|326389845|ref|ZP_08211409.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994113|gb|EGD52541.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 462

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/253 (11%), Positives = 64/253 (25%), Gaps = 24/253 (9%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +F+    E    EL    K     E          + + + G     ++        L 
Sbjct: 212 GNFIFRTREFEQMELEFFCKPGEDMEWFSYWRKYCMDWLLEFGLKEENLRFRDHKKEELS 271

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----------YDGLVSRFKGQNVPATG 350
           +Y+    +    FP    +   +   +     +          Y   V+  K        
Sbjct: 272 HYSTATTDIEYNFPFGWGELWGIANRTDFDLRQHMEHSGVDLSYMDPVTGEKYIPYCIEP 331

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLI-----------TTMDHDSDSLSKYQMYTQM 399
                  ++  L               V++             +                
Sbjct: 332 SVGVDRLMLAFLIDAYEEEELEDGETRVVLRLHPALAPIKAAVLPLSKKLSENAYKLYDQ 391

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           LR    +  +    + + G + +  D    P  I       +   + I+D    +++  +
Sbjct: 392 LRN---KFVVDYDETGSIGKRYRRQDEIGTPFCITYDFDSENDHCVTIRDRDTMQQVRIK 448

Query: 460 IKNNESWREARVA 472
           I+  E + E R+ 
Sbjct: 449 IEEVEKYLEERLN 461


>gi|312143669|ref|YP_003995115.1| prolyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904320|gb|ADQ14761.1| prolyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 568

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I +  R   +  G   +  P+L+ +    K     D+    +  L
Sbjct: 38  GIYSYLPLGYRVIKKIENITRKHMDASGAQEVLLPILQTAQI-WKDSKRWDKFGPLMMRL 96

Query: 74  QDDDGQWISLRY 85
           +D   +   L  
Sbjct: 97  RDRKDREYCLGP 108



 Score = 37.1 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 48/182 (26%), Gaps = 11/182 (6%)

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 E  L      E       G+          +           G        +VA
Sbjct: 390 SCLQCTEGKLNIKAGIEVGHIFKLGTKYSENMGANYLDENGRTQPIVMGSYGIGITRLVA 449

Query: 362 L------KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
                                 ++I  + +D     K +   Q L   G    +     +
Sbjct: 450 AAIEQNNDEYGIIWPKAIAPYQIIILALGNDEAVAEKSEEIYQELEAEGWEVLLDDRKER 509

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQ--IKDLAKGKELSREIKNNESWREARVAQ 473
             G +   ++    PL +  G+     G ++  I+     ++   +I N +      +A+
Sbjct: 510 A-GVKFNDSELIGIPLRLTIGSRSLENGEIEAMIR--ENNQKSKIKIDNLKEKTAELMAE 566

Query: 474 IT 475
           I+
Sbjct: 567 IS 568


>gi|322437350|ref|YP_004219562.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321165077|gb|ADW70782.1| threonyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 687

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 1/81 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      L   +   Q L+ AG+R E+    ++    +++       P  +
Sbjct: 584 WLAPVQVGLVPISEKHLEYARTVQQRLKDAGVRVELD-ERNEKMNAKIREFGVNKVPFIL 642

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           I G  E     + ++   KG 
Sbjct: 643 IMGDKESQSDEVSVRTRGKGD 663



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 1/77 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  + D +R      G++ + TP +   + L K    E+   + ++  
Sbjct: 306 GLIFWHPKGGLIRKAMEDWMREDCIKRGYEMVFTPHIMRRE-LWKISGHEENYGENMYPP 364

Query: 74  QDDDGQWISLRYDLTAP 90
            + D     L+      
Sbjct: 365 MELDDAEYRLKPMNCPG 381


>gi|167759228|ref|ZP_02431355.1| hypothetical protein CLOSCI_01575 [Clostridium scindens ATCC 35704]
 gi|167663102|gb|EDS07232.1| hypothetical protein CLOSCI_01575 [Clostridium scindens ATCC 35704]
          Length = 482

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/228 (7%), Positives = 58/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +         +      ++ V   +   +   + ++       +    +        
Sbjct: 257 EWFNYWKSFCLNWLETLGLKDDEVRYRDHSPEELSHYSKATTDVEFLFPFGWGELWGIAD 316

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F +   +       S     +    V      ++ A    +         + LE   
Sbjct: 317 RTDFDLTQHQNTSKQDMSYFDDEKKAKYVPYVIEPSLGADRMVLAFLCSAYDEEELEGGD 376

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P+ I  +          +     L +     E       N G + +  
Sbjct: 377 VRTVLHFHPALAPIKIGVLPLSKKLNEGAEKVYAQL-SKKYNCEFD--DRGNIGKRYRRQ 433

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + ++D    ++   +I++ +++   +  
Sbjct: 434 DEIGTPFCVTYDFESEEDGAVTVRDRDTMEQERIKIEDLDAYFAKKFE 481


>gi|50286281|ref|XP_445569.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524874|emb|CAG58480.1| unnamed protein product [Candida glabrata]
          Length = 462

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 60/469 (12%), Positives = 134/469 (28%), Gaps = 73/469 (15%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +  ++  G A       +I N+++  ++   +  +GF  + TPL+ Y  SL +     + 
Sbjct: 50  ITDQITPGSAFFLPNGTKIYNKLVSFMKTQQKHLFGFKEVITPLI-YRKSLWEQSGHWEN 108

Query: 66  PNKGVFSLQ--DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR--IGPVFRNEKHG 121
             + +F ++  D   +   L+          +   FD              P+ RNE  G
Sbjct: 109 YKEDMFRVEGNDLTKEEYGLKPMNCPGHC-VIFNRFDHSYNDLPIRYSDFSPLHRNEASG 167

Query: 122 P-GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                 +      D+          E+ ++    L  +   +     G  ++       +
Sbjct: 168 ALSGLTRVRMFHQDDGHIFCTPDQVEVEILNCLKLVDMCYTKVFPISGEQSKSK-----D 222

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              +H   +    +  L + D       + ++ +L +       +   GA          
Sbjct: 223 SYEIHLSTRPEHYIGELESWD----HAEEVLRSVLEKSSKPWKLNAGDGA---------- 268

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                    K    + +             +  +      +     N  K    I R   
Sbjct: 269 -----FYGPKLDIMVKDHHGKQHQVATIQLDFQLPQRFNLRYKDRDNSYKRPIMIHRA-- 321

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP-ATGFSIGISRLI 359
                         V+   ++ +       GG++   ++  +   +P  T     +    
Sbjct: 322 --------------VLGSVERFMAMLVESNGGKWPFWLNPNQAIVIPLNTNNEEQVKMAK 367

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                L         + PV I+ + +++D                IRAE         G 
Sbjct: 368 QLHDKLRGKLEIEDNLKPVPISHVSYNADI--------------DIRAE-------PVGY 406

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++K A  +N    II G  E       ++     +  +  + +     E
Sbjct: 407 RIKDAITKNYSYLIIVGDNEVKAQKFSVR---TRENRTPVLMDTNEILE 452


>gi|39939231|ref|NP_950997.1| threonyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39722340|dbj|BAD04830.1| threonyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 308

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 36/106 (33%), Gaps = 9/106 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  +   I +   +Y +  + TP++  ++   +     D     +F +
Sbjct: 9   GLPFWLPKGATVRRIVERYIVDKELSYDYHHVYTPIMANTELY-RISGHLDHYASNMFPI 67

Query: 74  QD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++G+ + LR             +         +Y+  P+   E
Sbjct: 68  MTLENGEKLVLRPMNCP-------HHMMIYKKTPHSYKELPLRIAE 106


>gi|70993228|ref|XP_751461.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66849095|gb|EAL89423.1| threonyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
 gi|159125604|gb|EDP50721.1| threonyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 737

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 50/482 (10%), Positives = 118/482 (24%), Gaps = 84/482 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  ++TP +   D  + K           +F 
Sbjct: 333 GCPFLLPNGTKIFNALQALLRAEYRKRGYQEVQTPNM--YDVGIWKRSGHWAHYKDDMFK 390

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+             +F       R+YR  P+   +     R        
Sbjct: 391 L-DVEKREWALKPMNCPG-------HFVLFGHRERSYRELPLRIADFGVLHRNEASGALS 442

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                   +  D  +          +    +              +  K+    +  L +
Sbjct: 443 GLTRVRKFQQDDTHIFCTQDQIASEIEGLFDFLQSIYGLFGFTFKL--KLSTRPEKYLGD 500

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV-SFLSIDLEKS 251
                 A ++L        K    +   D       G  +     D +   F    ++  
Sbjct: 501 LETWNYAEEQLKSAMT---KFKGKDWTIDEGDGAFYGPKIDITIADALKREFQCATIQLD 557

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                      +  EKG   +                 +    ++      +   +  IL
Sbjct: 558 YQAPINFKLEYMTNEKGQAVMEDSKNEGETKSNEPGPGRARPVVIHRAIIGSFERFLGIL 617

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                              GG++   +S  +   VP                        
Sbjct: 618 IEHF---------------GGKWPFWISPRQILIVPVMPAV------------------- 643

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                          +D + + Q     LR   +  ++ +  +     +++         
Sbjct: 644 ---------------NDYVEELQQI---LRGDKLNVDIDISGN-TMQKKIRTGQLAQYNF 684

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             + G  E+    + I++                    +   + +P+ E    ++ + +E
Sbjct: 685 IFVVGAQEKESRSVNIRNRDD--------------PATQHKGVMVPLEEARQKLRALRKE 730

Query: 492 NK 493
            +
Sbjct: 731 RR 732


>gi|327400106|ref|YP_004340945.1| glycyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327315614|gb|AEA46230.1| glycyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 568

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 38/132 (28%), Gaps = 20/132 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +              V +  +      + K    T ML+  GI  E     S + G + +
Sbjct: 447 ERRVLRLKRWMAPVQVAVLPLLSKGAFIEKSIEITFMLKKEGIFTE--YDDSGSIGRRYR 504

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
             D    P  +           + I+D                       QI + I  L 
Sbjct: 505 RFDEIGTPFCVTVDHQTFEDETVTIRDRDT------------------TRQIRVHIGGLA 546

Query: 483 STVKKILQENKE 494
             ++++L  +K+
Sbjct: 547 PALRELLSTDKD 558


>gi|119499848|ref|XP_001266681.1| threonyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119414846|gb|EAW24784.1| threonyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 737

 Score = 50.6 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 51/482 (10%), Positives = 118/482 (24%), Gaps = 84/482 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R  Y   G+  ++TP +   D  + K           +F 
Sbjct: 333 GCPFLLPNGTKIFNALQALLRAEYRKRGYQEVQTPNM--YDVGIWKRSGHWAHYKDDMFK 390

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+             +F       R+YR  P+   +     R        
Sbjct: 391 L-DVEKREWALKPMNCPG-------HFVLFGHRERSYRELPLRIADFGVLHRNEASGALS 442

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                   +  D  +          +    +              +  K+    +  L E
Sbjct: 443 GLTRVRKFQQDDTHIFCTQDQIASEIEGLFDFLQSIYGLFGFTFKL--KLSTRPEKYLGE 500

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV-SFLSIDLEKS 251
                 A ++L        K    +   D       G  +     D +   F    ++  
Sbjct: 501 LETWNYAEEQLKSAMT---KFKGKDWTIDEGDGAFYGPKIDITIADALKREFQCATIQLD 557

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
                      +  EKG   +                 +    ++      +   +  IL
Sbjct: 558 YQAPINFKLEYMTNEKGQAVMEESKTEGETKSNEPGPGRARPVVIHRAIIGSFERFLGIL 617

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
                              GG++   +S  +   VP                        
Sbjct: 618 IEHF---------------GGKWPFWISPRQILIVPVMPAV------------------- 643

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                          +D + + Q     LR   +  ++ +  +     +++         
Sbjct: 644 ---------------NDYVEELQQI---LRGDKLNVDIDISGN-TMQKKIRTGQLAQYNF 684

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             + G  E+    + I++                    +   + +P+ E    ++ + +E
Sbjct: 685 IFVVGAQEKESRSVNIRNRDD--------------PATQNKGVMVPLEEARQKLRALRKE 730

Query: 492 NK 493
            +
Sbjct: 731 RR 732


>gi|46580942|ref|YP_011750.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601757|ref|YP_966157.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|81566250|sp|Q728R5|SYT_DESVH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166987320|sp|A1VBB4|SYT_DESVV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|46450362|gb|AAS97010.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561986|gb|ABM27730.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Desulfovibrio
           vulgaris DP4]
 gi|311234632|gb|ADP87486.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 644

 Score = 50.6 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 42/116 (36%), Gaps = 5/116 (4%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +  +   L+T  D  ++ +   +     L  AGIR E  +  ++  G +++ A 
Sbjct: 529 GAFPAWLAPVQARLLTVTDAQNEFVESARA---ALAKAGIRVEADV-RNEKLGYKVREAQ 584

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
               P  ++ G  E   G + ++ L  G+ L  +  +          Q       +
Sbjct: 585 LEKIPYILVVGDKEVEAGGVNVR-LRTGENLGLKSLDEVVSLLESDCQEPFKRGGM 639



 Score = 37.9 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 31/96 (32%), Gaps = 5/96 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +R  I D +R  +    +D ++ P L   +   K     D   + ++  
Sbjct: 261 GMVFWHPKGMLVRTIIEDFLRKEHLKRRYDIVQGPQLLRRELWEKS-GHYDNYRENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP---LARYVAENFDTIVFPC 106
            + D     ++         + R    ++  +    
Sbjct: 319 TEIDENAYGVKPMNCLAHMLIYRSAIRSYRDLPKRF 354


>gi|297808713|ref|XP_002872240.1| AT5g26830/F2P16_90 [Arabidopsis lyrata subsp. lyrata]
 gi|297318077|gb|EFH48499.1| AT5g26830/F2P16_90 [Arabidopsis lyrata subsp. lyrata]
          Length = 713

 Score = 50.6 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/128 (9%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+  +            ++  +     S    +   + +  AG  
Sbjct: 588 HRAVLGSVERMFAILLEHYKGKWPFWISPRQAIVCPIS--EKSQKYAEKVQKEIHDAGFY 645

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
            +  L + +    +++ A        ++ G  E + G + ++         + I++    
Sbjct: 646 IDADL-TDRKIDKKVREAQLAQYNYILVVGETEAATGQVSVRLRDSAAHSVKSIEDLLEE 704

Query: 467 REARVAQI 474
            +A++A+ 
Sbjct: 705 FKAKIAEF 712



 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              +L  G         R+ NR++D I+  Y   G+  + TP + Y+ +L +     D  
Sbjct: 332 FSHQLSPGSYFFLPLGTRVYNRLMDFIKKQYWQRGYTEVITPNM-YNMALWETSGHADNY 390

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
              +F+   +  Q   L+      
Sbjct: 391 KDNMFTFNIEK-QEFGLKPMNCPG 413


>gi|239624742|ref|ZP_04667773.1| prolyl-tRNA synthetase [Clostridiales bacterium 1_7_47_FAA]
 gi|239521128|gb|EEQ60994.1| prolyl-tRNA synthetase [Clostridiales bacterium 1_7_47FAA]
          Length = 479

 Score = 50.6 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 54/187 (28%), Gaps = 18/187 (9%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                F     K   + F       +Y    S      +      +      + L     
Sbjct: 231 GTSHNFGDGFAKAFDIQFTDKDNTLKYVHQTSWGMTTRMIGALIMVHGDDNGLVL----- 285

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I  +  +++         L K       L+ AG   +    S K+ G +    + R
Sbjct: 286 -PPRIAPVQVMIVPVQQQKEGVLDKAFQLEDRLKKAGFSVKTD-DSEKSPGWKFADCEMR 343

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             PL +  G  +  +    +      ++    +   E+            +SE++ T++K
Sbjct: 344 GIPLRVEIGPKDMEKNQAVLVRRDTHEKSFISLDELET-----------KVSEMLDTIQK 392

Query: 488 ILQENKE 494
            + +  +
Sbjct: 393 AMYDKAK 399


>gi|207110817|ref|ZP_03244979.1| histidyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 81

 Score = 50.6 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            + +L       +      +       +  S      + LR +GI +E++   ++     
Sbjct: 11  LIVALSEMQLLDERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYP-EAQKIKKP 69

Query: 421 LKYADRRNCPLA 432
             YA+ +     
Sbjct: 70  FSYANHKGHEFV 81


>gi|153870648|ref|ZP_02000004.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS]
 gi|152072888|gb|EDN69998.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS]
          Length = 390

 Score = 50.6 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 92/336 (27%), Gaps = 12/336 (3%)

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R   + +     +   +    +       D +     +  +Y +   N      I  +  
Sbjct: 40  RQHHYQEVHTPQLVDRSLWEKSGHWDKFGDDMFVTQSENREYAVKPMNCPCHIQIFNQGL 99

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D                   L G+ + +     D++  F     +  E  D +   
Sbjct: 100 KSYRDLPLRLAEFGSCHRNEASGTLHGL-MRIRGFVQDDAHIFCTDDQIQQEVSDFIDLL 158

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
             +  +     +   +        G +E+   +E   +   N+ ++        G  Y  
Sbjct: 159 FKVYTDFGFKNILIKLSTRPEKRVGSDEVWDKAEKALELALNNKKLAWDLQPGEGAFYGP 218

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRL 358
              +   +    ++   +              G  Y       +   +        + R 
Sbjct: 219 KIEF---VLKDCLDRVWQCGTIQVDFSMPDRLGATYIAADGSKQVPVMLHRAILGSLERF 275

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I  L    +    +  + PV +  ++   +     +     L   G R E  L  ++  G
Sbjct: 276 IGVLIEEYAGALPLW-LAPVQVVILNITDEHADYAKQIEVKLLKEGFRVESDL-RNEKIG 333

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            +++    +  P  +I G  E     + ++ L  G+
Sbjct: 334 FKIREHTLQKIPYLLIIGGREIETQQVTVR-LRNGE 368


>gi|254819890|ref|ZP_05224891.1| threonyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 691

 Score = 50.6 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/118 (12%), Positives = 40/118 (33%), Gaps = 19/118 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D +         LR+ G+R E+     +     + + ++R  P  +
Sbjct: 576 WLAPVQVVGIPVADDHVDYLNDVAAQLRSHGVRVEVDASDDRMAKKIVNHTNQR-VPFML 634

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           + G  + + G +  +      +++                  +P    V  + K + +
Sbjct: 635 LAGDRDVAAGAVSFR-FGDRTQING-----------------VPRDGAVDAIVKWIAD 674



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            G A    K   +R  + +  R  +   G++ + TP +  +D         D   +G++
Sbjct: 287 SGLAVFHPKGGIVRRELEEYSRRKHIAAGYEFVNTPHITKADLFHTS-GHLDWYAEGMY 344


>gi|260463880|ref|ZP_05812076.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259030255|gb|EEW31535.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 658

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 80/257 (31%), Gaps = 8/257 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG----EKGFNELVVIS 276
           D++  F     L +E + I    LS   +    E+   +          ++ ++    I 
Sbjct: 391 DDAHIFCTEEQLAAECLRINDLILSTYADFGFEEVSVKLSTRPDKRVGTDEAWDHAEAIM 450

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
             V ++    +  +I ++I  G   + G  +E +L   +  E Q            R+  
Sbjct: 451 GNVLETIRTRSGNRIKTSINPGEGAFYGPKFEYVLKDAIGREWQCGTTQVDFNLPERFGA 510

Query: 337 LVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                  +            G     + +     S +      P+ +      S++    
Sbjct: 511 FYIGSDSEKKQPVMVHRAICGSMERFLGILIENYSGHFPLWFAPLQVVVATITSEADGYA 570

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 L+ AG+ AE  L  ++    +++       P+ ++ G  E     + I+ L   
Sbjct: 571 TEVVAKLKAAGLLAEADL-RNEKINYKVREHSLAKVPVILVCGKREAEEQTVNIRRLGSR 629

Query: 454 KELSREIKNNESWREAR 470
            + S  +    +     
Sbjct: 630 DQQSLGLAEAIAQLTEE 646


>gi|160946146|ref|ZP_02093357.1| hypothetical protein PEPMIC_00108 [Parvimonas micra ATCC 33270]
 gi|158447669|gb|EDP24664.1| hypothetical protein PEPMIC_00108 [Parvimonas micra ATCC 33270]
          Length = 648

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  +   I +     G++ + TP+L   D   K     D     +F  
Sbjct: 265 GLPFWLPKGATIRRVVERYIVDKEIECGYEHVYTPILANVDLY-KTSGHWDHYQDSMFPP 323

Query: 74  QD-DDGQWISLRYDLTA 89
            D  +G+ + LR     
Sbjct: 324 MDLGNGELLVLRPMNCP 340



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/244 (9%), Positives = 69/244 (28%), Gaps = 9/244 (3%)

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           ++  +  D +          +     EK F++  + +          + +       +G 
Sbjct: 408 LMKSVYEDFDIKNFRFRLSYRDPENKEKYFDDDEMWNNAEAMLKSAMDDLGYEYFEAKGE 467

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD------GLVSRFKGQNVPATGFSI 353
             + G   +  +   +  E+    +        R+D         +  +   +     S 
Sbjct: 468 AAFYGPKLDVQVKTAIGLEETLSTIQLDFLLPERFDLTYVGEDGKNTHRPVVIHRGIVST 527

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               +   ++  + +         V I  +              +      IR  +    
Sbjct: 528 MERFVAYLIEEYKGAFPTWLAPEQVKILPIS--DKFNDYAYELQKEFAKKDIRVAVD-DR 584

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           ++  G +++ A     P ++I G  E +   + ++   +G + S + +         V  
Sbjct: 585 TEKIGLKIREAQLAKIPYSLIVGENEVNERTVSVRKRGEGDKGSMKFEAFLDKILEEVNS 644

Query: 474 ITIP 477
             + 
Sbjct: 645 KVVK 648


>gi|303237224|ref|ZP_07323794.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482611|gb|EFL45636.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 649

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 42/133 (31%), Gaps = 3/133 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +          +          +R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNGYAEEVRAYFEANEVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A +    ++  G +++  + +  P  +I G  E + G++ ++    G++ +   ++    
Sbjct: 578 AIVD-DRNEKIGRKIRDNELKRVPYMVIVGEQEMADGLVSMRQQGGGEQATMPKEDFVKR 636

Query: 467 REARVAQITIPIS 479
            +  VA+    + 
Sbjct: 637 IQNEVAEQLKNLE 649


>gi|225175968|ref|ZP_03729960.1| prolyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168556|gb|EEG77358.1| prolyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 483

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 14/121 (11%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            + L K     + ++ AGIR EM      + G +    + +  PL I  G  +   G   
Sbjct: 307 EEVLPKAAAIYEEIKEAGIRIEMDDREEYSPGWKFNEWEMKGVPLRIEVGPRDLEAGQAV 366

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIP--------------ISELVSTVKKILQEN 492
           +     G++ +  I + ++     + +I                  ++     KKI++E 
Sbjct: 367 LARRDNGEKETVAIGDLKARVPILLGEIQANMFEKAKNFREENTYRTDDYEEFKKIIEEK 426

Query: 493 K 493
           +
Sbjct: 427 R 427


>gi|240103794|ref|YP_002960103.1| glycyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|259511936|sp|C5A1H0|SYG_THEGJ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
          ligase; Short=GlyRS
 gi|239911348|gb|ACS34239.1| Glycyl-tRNA synthetase (glyS) [Thermococcus gammatolerans EJ3]
          Length = 570

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       I+ +I   IR  ++  GF  +ETP +          
Sbjct: 32 RGFYDYGPLGATIKRKIEQKIREAFQREGFFELETPDITPEKVFIASG 79



 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 6/113 (5%)

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSD--SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           + ++   +     K+M P+ +  +   +     S      + L+ AG             
Sbjct: 456 LVIEEDRTYLKLKKDMAPIEVAVLPLVAKEPLKSIAYEIFRKLQKAGFIV--VYDEKDTI 513

Query: 418 GNQ-LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           G + L+Y D    P  +           + I+D    +++   I+   S    
Sbjct: 514 GRRYLRY-DEIGTPYCVTIDNQTPEDSTVTIRDRDTREQVRVSIEELPSKLRE 565


>gi|297205704|ref|ZP_06923099.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297148830|gb|EFH29128.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 656

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 62/206 (30%), Gaps = 7/206 (3%)

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
             +E+   S+ + K   +   +           Y      +        +E    +    
Sbjct: 445 ANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT-ALGNDETMSTIQLDF 503

Query: 328 VGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNN-IKEMGPVLITTM 383
           +         V +   ++ P     G    + R I  L  +             V I  +
Sbjct: 504 MLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPEQVEIIPV 563

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
           + D+      +     L   G RAE+    ++  G +++ +  +  P  ++ G  E +  
Sbjct: 564 NLDAHG-EYAKKVRDELLKHGFRAEVDF-RNEKMGYKIRESQTQKVPYTLVLGDDEMNSN 621

Query: 444 MLQIKDLAKGKELSREIKNNESWREA 469
            + ++     K+ S  +       +A
Sbjct: 622 AVNVRPYGTEKQESMSLDKFIDELQA 647



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+  + TP+L   D+  K         + +F  
Sbjct: 272 GLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLDAY-KTSGHWAHYREDMFPP 330

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 331 MDMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 390

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A++  ++ D  +   I    + +   + K  D       + 
Sbjct: 391 MTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDEMW 450

Query: 186 GDDKLN 191
              +  
Sbjct: 451 ERSQKM 456


>gi|169824388|ref|YP_001691999.1| threonyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|238687735|sp|B0S169|SYT_FINM2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167831193|dbj|BAG08109.1| threonyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 634

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + + N +   ++      G+  I+TPL+  ++ L       D   + ++  
Sbjct: 261 GFPFFHPNGMVVLNELEKFLKEQLLERGYGQIKTPLI-LNEHLWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 319 TKIDGEDYAIKPMNCPG 335



 Score = 43.3 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 9/103 (8%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFG---NQLKYADRRNC 429
            + PV +  +              Q ++  G+R ++   S K       +QLK  +    
Sbjct: 534 WLSPVQVEILPISDKFNDYAYELQQKMKARGLRVKVDDRSEKIGLKIRESQLKKVN---- 589

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             ++I G  E     + ++    G   S+      +       
Sbjct: 590 -YSLIIGQNEIDNNEVSVRKRDIGDVGSKNTDEFINELVDEYQ 631


>gi|302380527|ref|ZP_07268992.1| threonine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|303234012|ref|ZP_07320661.1| threonine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302311470|gb|EFK93486.1| threonine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302494937|gb|EFL54694.1| threonine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 634

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + + N +   ++      G+  I+TPL+  ++ L       D   + ++  
Sbjct: 261 GFPFFHPNGMVVLNELEKFLKEQLLERGYGQIKTPLI-LNEHLWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              DG+  +++      
Sbjct: 319 TKIDGEDYAIKPMNCPG 335



 Score = 43.7 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 26/247 (10%), Positives = 64/247 (25%), Gaps = 14/247 (5%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             +++  ++ F      K   +    +        G +E   ++    K+      +   
Sbjct: 392 IEDEVSKIIDFCDYIYSKFGFKYEVELSTRPEDSMGSDEDWDLAISSLKNALEHKGLPYK 451

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--- 349
                G  Y     +          +    +              ++    +  PA    
Sbjct: 452 INEGDGAFYGPKIDFHLEDAIGRTWQCG-TIQLDFQMPERFDMTYIASDGSKKRPAMIHR 510

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                  R +  L    +    +  + PV +  +              Q ++  G+R ++
Sbjct: 511 AILGSEERFMGILIEHYAGKFPLW-LSPVQVEILPISDKFNDYAYELQQKMKARGLRVKV 569

Query: 410 FLGSSK-NFG---NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              S K       +QLK  +      ++I G  E     + ++    G   S+      +
Sbjct: 570 DDRSEKIGLKIRESQLKKVN-----YSLIIGQNEIDNNEVSVRKRDIGDVGSKNTDEFIN 624

Query: 466 WREARVA 472
                  
Sbjct: 625 ELVDEYQ 631


>gi|291537165|emb|CBL10277.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Roseburia
           intestinalis M50/1]
          Length = 494

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/230 (10%), Positives = 59/230 (25%), Gaps = 9/230 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   +   + + I+      G+  + TP +   +   K     D   + +F 
Sbjct: 201 RGLPMFLPKGYTVWQELENYIKAKERKLGYLHVMTPCVGTVNLY-KTSGHWDHYKENMFP 259

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR             +         +Y+  P+   E     RF       
Sbjct: 260 AMEVEGESFVLRPMNCP-------HHMMIYANRMHSYKDLPIRIGEIAHDFRFEASGTL- 311

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                      +     +  + +E+   K  +          +      + L   +   +
Sbjct: 312 KGIERGRHFCQNDAHLFVTPEQIESEFAKVVELIFDTYKDFNITDYRCVLSLRDPEDKVK 371

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                   +  +    + +  +  E   +       G  L       + +
Sbjct: 372 YHDDDEMWNNAENALRKVLDDIGIEYTEEIGEAAFYGPKLDVNVKPAIGN 421


>gi|229586468|ref|YP_002844969.1| threonyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259516664|sp|C3PMR6|SYT_RICAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|228021518|gb|ACP53226.1| Threonyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 635

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/382 (10%), Positives = 94/382 (24%), Gaps = 10/382 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           +F         +                ++  +     V        +    +       
Sbjct: 254 HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASGHWEKFR 313

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D + A+        +   N      I ++      D                   L G+ 
Sbjct: 314 DDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +T E +        +  +    ++            G NE+
Sbjct: 373 MRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEIRAGSNEV 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E   K          +     G  Y     +  +        +   +    V    
Sbjct: 433 WDKAENALKEAVEQAGFNYTLNPGEGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLPER 491

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                V+    +  P       +G     + +   E +      + PV +      SD  
Sbjct: 492 LDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWLAPVQVAIATITSDLN 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   GIR +  +   K    +++    +  P+  + G  E+    + I+ L
Sbjct: 552 DYALEVQKALIDNGIRTDFNISPDK-INYKIREFSNQKIPMIAVIGKQEQENKQVAIRRL 610

Query: 451 AKGKELSREIKNNESWREARVA 472
               +    ++   +  +    
Sbjct: 611 GTTDQEVLSVEQLIAVVKEENE 632



 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +     ++    +F+L
Sbjct: 261 GMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK-SLWEASGHWEKFRDDMFAL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 ET-DDKTLALKPMNCP 334


>gi|328957405|ref|YP_004374791.1| proline--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673729|gb|AEB29775.1| proline--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 568

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+  ++ + +R  +E      +  P L   + L +     +   + 
Sbjct: 34  QISSGVYSYLPLATRVLEKLKNIMREEFEKINAVEMLMPSLLPRE-LWEESGRYETYGED 92

Query: 70  VFSLQDDDGQWISLRY 85
           + +LQD  G+   L  
Sbjct: 93  LMTLQDRHGRDYLLGP 108



 Score = 43.7 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +   +   ++      LI       D ++        L+ AG    +   + +  G + K
Sbjct: 459 EEGLNWPRHLAPYELHLIPVNMKADDQVNLSNELYTSLQNAGFSVLLDDRNER-VGVKFK 517

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +D    P+ I  G       ++++K    G+ L    +  
Sbjct: 518 DSDLIGMPIRITVGKK-AQENIVELKLRKTGEALEVRTEEL 557


>gi|256825028|ref|YP_003148988.1| glycyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688421|gb|ACV06223.1| glycyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 468

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/235 (7%), Positives = 53/235 (22%), Gaps = 17/235 (7%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS-----TIVRGLEYY 302
            ++ +    +         +         + +      +  ++             +   
Sbjct: 235 FDEWLEVCEKWFLDLGITPENIRRYEHPEDKLSHYSDRTIDLEYRFGFSGSEFGELMGVA 294

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
               ++  +      +      F    G      ++    G       F I       A 
Sbjct: 295 NRTDFDLSVHAEASGQD--LSYFNQATGERYVPYVIEPAFGLTRALMAFLIDAYTEDEAP 352

Query: 363 KSLESST-------NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            +            +       V +  +  + +   K +     LR      ++    S+
Sbjct: 353 NAKGGMDKRVVLKLDPRLAPVKVAVLPLSRNEELSPKARELAAQLRQY---WDVDFDDSQ 409

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G + +  D    P  I           + I++     +    +   + +   R
Sbjct: 410 AIGKRYRRQDEIGTPFCITVDFDTLEDDAVTIRERDTMSQERVPLDQVQGYLAQR 464


>gi|119511594|ref|ZP_01630701.1| prolyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463755|gb|EAW44685.1| prolyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 602

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 34/106 (32%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R             P L+ ++ L K     D   K    
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVREEMNATNAQECLLPQLQPAE-LWKESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +FSL D   Q + L     ++   +AR +  ++  +       +  
Sbjct: 96  MFSLIDRREQQLGLGPTHEEVITTVARDMIRSYRQLPLHLYQIQTK 141



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 20/128 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++      D+  +   Q     L  AG+   +     +  G + K AD 
Sbjct: 494 IWPVAIAPYHAIVTIPNIKDAQQVEIAQKLYTQLNKAGVETLLDDRDERA-GVKFKDADL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I+ G    + G +++                   + A      I I E+V+T++
Sbjct: 553 IGIPYRIVTG-RAINNGKVEV------------------VKRATRETQEIAIEEVVNTLQ 593

Query: 487 KILQENKE 494
           + ++   E
Sbjct: 594 QWIKTALE 601


>gi|33240514|ref|NP_875456.1| threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|73919816|sp|Q7VBM8|SYT_PROMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33238042|gb|AAQ00109.1| Threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 643

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 83/303 (27%), Gaps = 12/303 (3%)

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD--KLNERLIVLRAIDKLDKFGLQG 210
           D        R      +N    +    E +  + D   +L E     R        GL  
Sbjct: 315 DMFTTTSENREYAIKPMNCPCHIQVFNEGLKSYRDLPIRLAEFGSCHRNEPSGALHGLMR 374

Query: 211 VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN 270
           V+        D++  F   A +  E    +     +        +   +        G +
Sbjct: 375 VR----NFVQDDAHIFCTEAQIQDEVSKFIDLVFDVYKAFGFESIIIKLSTRPTKRVGSD 430

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGS 327
           E+   SE       N  + + S     G  Y     +        + +            
Sbjct: 431 EIWDKSEKALADALNIKKFEWSYLPGEGAFYGPKIEFSLKDCIDRVWQCGTIQVDFSMPH 490

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
             G    D    +     +           + + ++  E           + +  +    
Sbjct: 491 RLGASYIDENSQKKVPVMLHRAILGSFERFIGILIEEYEGKFPPWLSP--IQVIVIGITD 548

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
            +  K +  + +L   G RA  +   ++  G +++    +  P  +I G  E+  G + +
Sbjct: 549 RNSIKCKEISNLLMLRGYRA-TYDTRNEKVGLKIREHTLQRIPYLLIIGDKEQEEGTVSV 607

Query: 448 KDL 450
           + +
Sbjct: 608 RTM 610



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 4/77 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKGVFS 72
           G      K   I   +   IR       +  I+TP  +  D SL +     D+  + +F+
Sbjct: 261 GMIFWHPKGWSIYQVLESFIRETLILNDYKEIKTP--QTVDRSLWEKSGHWDKFKEDMFT 318

Query: 73  LQDDDGQWISLRYDLTA 89
               + +  +++     
Sbjct: 319 -TTSENREYAIKPMNCP 334


>gi|313124034|ref|YP_004034293.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280597|gb|ADQ61316.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 565

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++  +    I     N G   +  P +  S S+ +      +    +F L
Sbjct: 38  GVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPS-SMWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+ + L  
Sbjct: 97  KDRHGREMLLGP 108


>gi|268679949|ref|YP_003304380.1| prolyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617980|gb|ACZ12345.1| prolyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 567

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 33/98 (33%), Gaps = 4/98 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +       + ++I + ++   +  G   I+  ++  ++ L K     D   K +  
Sbjct: 37  SGLYNFLPMGKIVLDKIRNVVKEEMDETGAQEIQMGVVSPAE-LWKQSGRYDVFGKELCR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
           ++D       L     ++   + R    ++  +     
Sbjct: 96  IKDRKENEFVLGPTHEEVVVDIVRNRINSYKQLPLHLY 133



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 60/218 (27%), Gaps = 6/218 (2%)

Query: 259 VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
           +K       G NE+      V    +   R      +  G           I     +  
Sbjct: 352 LKEAKNLICGANEVDYHMVGVGMFNFKEERYADLVAVKEGDVCACCGGRLGITKGIEVGH 411

Query: 319 KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV 378
             +     +   G  +     + +   +   G  +     ++   S +       +    
Sbjct: 412 IFQLGQKYAKAMGATFLDKNGKAQPFYMGCYGVGVSRLVAVMIEASHDEKGCIWNKQTAP 471

Query: 379 L----ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
                I +   D    +  +     L    +   +   + + FG ++K  +    P A+I
Sbjct: 472 YLLDIIVSNSKDEAQSAYAEEIYSALMQERLSVLLDDRNER-FGFKMKDYELIGLPYALI 530

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            G  E   G ++I +    ++   + +         +A
Sbjct: 531 VG-KELEEGFVEIVERKTLEKTVVKKEEALLKLRELLA 567


>gi|188533977|ref|YP_001907774.1| threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689736|sp|B2VEM1|SYT_ERWT9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|188029019|emb|CAO96887.1| Threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 642

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/348 (13%), Positives = 94/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G ++L   SE    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDLWDRSEADLAAALKENGIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYVGESNERQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  +  R   + Q+ 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSIDVNEVIAKLQDEIRSRNLHQLE 641



 Score = 36.7 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 10/155 (6%), Positives = 38/155 (24%), Gaps = 3/155 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRTKLKEYEYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                      +     + ++   +   ++ V   
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDM 407


>gi|229496081|ref|ZP_04389803.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316977|gb|EEN82888.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 672

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 31/92 (33%), Gaps = 1/92 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    +           L    I A +    ++  G +++  + +  P  +
Sbjct: 565 WLTPDQVVVLPIGENFNEYAYKVRDFLANHDITATVD-DRNEKIGRKIRDNELKRIPYLL 623

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           I G  E     + ++   +G + S ++     
Sbjct: 624 IVGAQESENETVSVRKQGEGDQGSVKLSTFAE 655



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 76/260 (29%), Gaps = 11/260 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R R+ D ++ I +++G+  + TP +   +   K      +     F  
Sbjct: 284 GLPLWLPRGTRLRLRLEDFLKKIQKDFGYQQVMTPHIGNIELY-KTSGHYAKYGADSFRP 342

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
                +G+   L+             + +       +YR  PV   E     R+ Q  + 
Sbjct: 343 ITTPQEGEEFMLKPMNCP-------HHCEIYRIKPHSYRDLPVRLAEFGTVYRYEQSGEL 395

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                     T D        + ++   +K  D    I      +    +I L   +   
Sbjct: 396 H-GLTRVRGFTQDDAHIFCTPEQVKDEFLKVMDIIFIIFKALKFENFEAQISLRDKNNRE 454

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           + +      D+ ++  ++  +        +       G  L     D +     +   + 
Sbjct: 455 KYIGSDENWDRAEQAIIEACQEKGLPAVVEYGEAAFYGPKLDFMVKDAIGRRWQLGTIQV 514

Query: 252 MHELYELVKGTIAGEKGFNE 271
            + L E       GE     
Sbjct: 515 DYNLPERFDLEYTGEDNQKH 534


>gi|78212243|ref|YP_381022.1| prolyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|114152271|sp|Q3ALR5|SYP_SYNSC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78196702|gb|ABB34467.1| prolyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 593

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 38/156 (24%), Gaps = 9/156 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         R+  +I   +R      G      P L  ++   K    +        +
Sbjct: 37  SGIYAYLPLMWRVLQKITAVVREEMNRAGAQETLLPQLHPAELWQKSGRWQGYTAGEGIM 96

Query: 71  FSLQDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
           F L+D  G+ + L     ++   LA    R   +    +      +R     R       
Sbjct: 97  FHLEDRQGRELGLGPTHEEVITSLAGELLRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGR 156

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
            F            +        M        E  G
Sbjct: 157 EFIMKDAYSFHASEADLRETYGAMDQAYRRIFERCG 192



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 62/226 (27%), Gaps = 20/226 (8%)

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
             L  E    + SF+    +  +H                +     +  V +    S   
Sbjct: 368 LRLADETASELGSFICGANQPDLHRFNTSWTAIEQKPTTLDLRNARAGDVCQHNLESRLT 427

Query: 290 KISSTIVRGLEYYTGCVYEAI-LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
           +     V  +        EA+  GF   N K +P   G  G G       +  +  +   
Sbjct: 428 EKRGIEVGHIFQLGRKYSEAMESGFTNENGKTEPFWMGCYGIGVSRLAQAAVEQHHDDSG 487

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
             +                    I     +++     D       +     L+ A +   
Sbjct: 488 ICW-----------------PTAIAPFEAIVVVANIQDDTQGQLGEALYAELQAADVDVL 530

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           +     +  G + K AD    P  I+ G    S G++++   +  +
Sbjct: 531 LDDRKERA-GVKFKDADLIGIPWRIVVGRD-ASEGIVELVRRSSRE 574


>gi|30248961|ref|NP_841031.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein
           [Nitrosomonas europaea ATCC 19718]
 gi|73919810|sp|Q82VV1|SYT_NITEU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|30138578|emb|CAD84869.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein
           [Nitrosomonas europaea ATCC 19718]
          Length = 635

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  +I   +R      G+  I TP +    SL +     +   + +F +
Sbjct: 261 GMVYWHPKGWVVWQQIEQYMRQTLAGNGYVEIRTPQV-LDRSLWESSGHWENFRENMF-I 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGR 124
            + + +  +++        +    +        P R    G   RNE  G   
Sbjct: 319 TESENRHYAIKPMNCPGHVQVF-NHGLRSYRDLPLRLAEFGSCHRNEASGALH 370



 Score = 44.8 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  ++   +     Q+ T  L+ +GIRA   L  ++    +++    +  P  ++ G  
Sbjct: 540 QVIILNISRNQAEYAQLITDELKQSGIRASSDL-RNEKISYKIREHSMQKIPYLMVVGDK 598

Query: 439 ERSRGMLQIK 448
           E     + ++
Sbjct: 599 EMENRTVTVR 608


>gi|282899245|ref|ZP_06307218.1| Prolyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
 gi|281195881|gb|EFA70805.1| Prolyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
          Length = 603

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 4/76 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  +I   +R      G +    P L+ ++ L K     D   K    
Sbjct: 37  SGVYAYLPLMWRVLQKISQIVREEMNATGAEECLLPQLQPAE-LWKESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY 85
           +FSL D   Q + L  
Sbjct: 96  MFSLIDRREQHLGLGP 111



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 2/110 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++      D+  +   +     L   GI   +   + +  G + K AD 
Sbjct: 494 IWPVAIAPYHAIISIPNIKDTHQVEIAEKIYTELNKVGIETLLDDRNERA-GVKFKDADL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              P  I+ G    S G +++   A  +     I+N     E+ ++Q  +
Sbjct: 553 IGIPYRIVTGRS-ISHGKVEVVTRATRESQEIAIENLVDTLESWISQRDV 601


>gi|258647248|ref|ZP_05734717.1| proline--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260852895|gb|EEX72764.1| proline--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 494

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 13/223 (5%)

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            A ++    L V ++ V           + S   R          EA++      +    
Sbjct: 185 EADQRARQMLDVYADCVENVMAVPVVRGMKSATERFAGAVQTYTIEAMMQDGKALQNGTS 244

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGP 377
              G           V +      P        +R++ AL                    
Sbjct: 245 HFLGQNFAKAFGVQYVDKDNQLQYPWATSFGVSTRMMGALIMTHSDDNGLVLPPHLAPIQ 304

Query: 378 VLITTMDHDSDSLSKY----QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPL 431
           V+I  +  +++ L K     +     LR  GIR +     +K  G   K+AD   +  P+
Sbjct: 305 VVIVPIYKNNEELQKLDERLEAIASTLRGKGIRVKYDNADNKRPG--FKFADYELKGVPV 362

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++ G  +   G +++      ++ + +++  E + E  + +I
Sbjct: 363 RLVMGGRDLQNGTIELMRRDTLEKETLQVEGIEEYVEKLLEEI 405


>gi|291299567|ref|YP_003510845.1| glycyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290568787|gb|ADD41752.1| glycyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 461

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  +     K +   + LR    R  +    +   G + + AD    PL +    
Sbjct: 368 VAVLPLSRNEKLSPKARDLAKDLRK---RWVVDFDDAGAIGRRYRRADEIGTPLCVTVDF 424

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + ++D    K+    +   ES+   R
Sbjct: 425 DTLDDDAVTVRDRDTMKQERVALSQVESYLIER 457


>gi|226954309|ref|ZP_03824773.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226834935|gb|EEH67318.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 640

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/364 (12%), Positives = 89/364 (24%), Gaps = 20/364 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 264 FWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAENMFTTHSES 323

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 324 RNYAVKPMNCPCHVQVFNQGLKSY-RDLPIRLAEFGSCHRNEPSGSLHGIMRVRG----F 378

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +   L +  +    E+   +        G + L  I+E 
Sbjct: 379 TQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDIAEK 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                 +   +        G  Y     +        +    +                 
Sbjct: 439 SLADALDDAGLAWDLQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPIRLDAS 495

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +      +          R I  L    +       + P+    M+         
Sbjct: 496 YVTEDNERDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLAPIQACVMNITDSQADAC 554

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----K 448
           +     L+ +G+RA   L  ++  G +++       P  ++ G  E   G + +     K
Sbjct: 555 EQVVAKLKESGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 613

Query: 449 DLAK 452
           +L  
Sbjct: 614 NLGT 617



 Score = 40.2 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 255 MQEEAP-GMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDF-TLWEKSGHAANY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 AENMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 370


>gi|284799642|ref|ZP_05984463.2| threonine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797591|gb|EFC52938.1| threonine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 643

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 541 WLAPVQMVIMNITENQADYCREVAAKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 599

Query: 434 IQGTGERSRGMLQIK 448
           + G  E+    + ++
Sbjct: 600 VVGDKEKQENKVAVR 614



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 267 GMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 324

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 325 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 376


>gi|319404307|emb|CBI77900.1| Threonyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 654

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 46/377 (12%), Positives = 105/377 (27%), Gaps = 14/377 (3%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
            +  +                  +           +        S       E       
Sbjct: 266 MIFWHPKGWKMFQNLISYMRRRLDNHKYAEVQAPQVLDKSLWEISGHWGWYKENMFKTIP 325

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD--DKLNERLIVLRAIDKLDKFGLQGV 211
             +    +       +N    +      +  + D   +L E  +V R        GL  V
Sbjct: 326 AADDWNDEYTYALKPMNCPGHVQIFKHGLKSYRDLPVRLAEFGLVHRYEPSGSLHGLMRV 385

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           +        D++  F     L  E + I    LS   +    E+   +        G +E
Sbjct: 386 RS----FTQDDAHIFCTEEQLADECLSINDLILSTYADFGFKEISLKLSTRPEKRVGSDE 441

Query: 272 LVVISELVR----KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
           L   +E +     K+    +   +  +I+ G   + G  +E  L   +  E Q       
Sbjct: 442 LWDHAENIMTSVLKTIEEKSSGCVKISILPGEGAFYGPKFEYTLTDAIGREWQCGTTQVD 501

Query: 328 VGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
                R+         +            G     + +     + +    + P  I    
Sbjct: 502 FNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHIPFWLAPQQIVVAT 561

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
             SD+    +  T+ L+  G+ A++    ++    +++    +  P+ ++ G  E     
Sbjct: 562 ITSDANEYAKKITEKLKALGLSAKLD-SRNEKINYKIREHSLQKVPVILVCGKQEAQTNS 620

Query: 445 LQIKDLAKGKELSREIK 461
           + ++ L   ++    I+
Sbjct: 621 VNMRRLGSIEQTFLPIE 637


>gi|254172667|ref|ZP_04879342.1| glycyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033596|gb|EEB74423.1| glycyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 569

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       I+ +I   IR  ++  GF  +ETP +          
Sbjct: 31 RGFYDYGPLGATIKRKIEQKIREAFQREGFFELETPDITPEKVFIASG 78



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 37/113 (32%), Gaps = 6/113 (5%)

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSD--SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           + ++   +     K+M P+ +  +   +     S      + L+ AG             
Sbjct: 455 LVIEEDRTYLKLKKDMAPIEVAVLPLVAKEPLKSIAYDVFRKLQKAGFIV--VYDEKDTI 512

Query: 418 GNQ-LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           G + L+Y D    P  +           + I+D    +++  +I+   S    
Sbjct: 513 GKRYLRY-DEIGTPYCVTIDNQTPEDNTVTIRDRDTREQVRVKIEELPSKLRE 564


>gi|154300294|ref|XP_001550563.1| hypothetical protein BC1G_11336 [Botryotinia fuckeliana B05.10]
 gi|150856659|gb|EDN31851.1| hypothetical protein BC1G_11336 [Botryotinia fuckeliana B05.10]
          Length = 787

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/480 (9%), Positives = 112/480 (23%), Gaps = 62/480 (12%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N I+  +R  Y   G++ + TP +  S+ L K           +F+   + 
Sbjct: 350 WLPHGARIYNTIMSFLREQYWTRGYEEVITPNMYNSE-LWKTSGHWAYYKDDMFTFPVEK 408

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               +L+                     C  +        E          +  +  +  
Sbjct: 409 D-TFALKP--------------MNCPGHCLMFGHRERSHRELPWRVADFGVLHRNEASGA 453

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL-EKIGLHGDDKLNERLIV 196
            +  T         A         +++     +  K + G+L     L+   +  + L  
Sbjct: 454 LTGLTRVRRFQQDDAHIFCREDQIKDEITGLFDFLKAIYGLLGFTFKLNLSTRPEKYLGK 513

Query: 197 LRAIDKLDKFGLQGVKLLLGEG-RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
           L   D       + ++  L E   TD    +       +     +   +   L++     
Sbjct: 514 LETWD----MAEEKLRSALDEFAATDGGVPWVLNEGDGAFYGPKIDITICDVLKREWQCA 569

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +           +  +      +        K     V+          E       
Sbjct: 570 TIQL-----------DFQLPQNFGLEYNTGDVPTKKDEEAVKEPVVKPKKTTEPEDPNAP 618

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
             E               Y  L        +     +  I R    L    +        
Sbjct: 619 PKE-------------RVYKPLTPGCARPVMIHRAMAGSIERFTAILIEHFAGKWPFWLS 665

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
               I  +          +    +     +  ++ L  +     +++           + 
Sbjct: 666 PR-QILVIPVGVGYFEYAKEVQSIFHKQQMFIDVDLSGN-TLQKKIRTGQLAQYNFIFVV 723

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           G  E     + +++                   ++     + + E +  +  +  E + +
Sbjct: 724 GDTEMKGREVNVRNRDD--------------TSSQDRGKPVSLQEAIEKLTALRDERRSD 769


>gi|110834994|ref|YP_693853.1| threonyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110648105|emb|CAL17581.1| Threonyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 638

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 1/79 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R  + + IR   E  G++ + TP +     L +     D+  + +F++
Sbjct: 263 GSMFWHPKGWRMRKNLENYIRGKMEKGGYEEVSTPQMMDR-ILWEQSGHWDKYGEDMFTV 321

Query: 74  QDDDGQWISLRYDLTAPLA 92
              D + ++++        
Sbjct: 322 CTHDHKEMAVKPMNCPGHV 340



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/360 (11%), Positives = 96/360 (26%), Gaps = 12/360 (3%)

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH-- 166
           +R+     N   G      + +     +        +       + +  V    +     
Sbjct: 272 WRMRKNLENYIRGKMEKGGYEEVSTPQMMDRILWEQSGHWDKYGEDMFTVCTHDHKEMAV 331

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
             +N    +    + I  + D  +          ++        ++        D++  F
Sbjct: 332 KPMNCPGHVQIFKQGITSYRDLPIRLGEFTTLFRNEAHGALHGLMRAR--SFSQDDAHIF 389

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
                +  E    +     +  +                  G +E    +E   +S   S
Sbjct: 390 CTEEQVNEETAGFIKMLREVYADFGFDSFRIKFSDRPDNRAGSDETWDKAEGALRSAVES 449

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV 346
             ++       G  Y     +  +      + +   +    V         V+    +  
Sbjct: 450 LGLECELNPGEGAFYGPKLEF-VLRDAIGRDWQCGTLQVDFVLPDRLDAEYVAEDGSRQR 508

Query: 347 PAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
           P              L + ++S            PV + T+ + +D         Q L  
Sbjct: 509 PVMLHRAVLGSLERFLGILIESTAGHLPLWLAPRPVAVCTITNSAD--EYATTVQQKLVA 566

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           AGI AE+ +  ++  G +++   R   P   + G  E     + I+ L      + ++  
Sbjct: 567 AGIPAELDI-RNEKIGFKVREHSRAKTPRIWVIGEQEAQHNQVAIRTLGSQATETVDLDE 625


>gi|328351896|emb|CCA38295.1| threonyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 454

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/249 (9%), Positives = 65/249 (26%), Gaps = 11/249 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ N+++  ++   + +GFD + TPL+ Y   L +     D   + ++ +
Sbjct: 57  GSVFFLPHGTRLFNKLVQFMKIQQKKHGFDEVITPLI-YKKKLWEISGHWDNYKEDMYRV 115

Query: 74  Q-------D-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           +       D  D +   L+            + FD  +             +     G  
Sbjct: 116 EGNEVSHGDAKDEETFGLKPMNCPGHCLIY-KRFDRSINELPIRYSDWSSLHRNEASGAL 174

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
               +    +          E           +           +   +L    +     
Sbjct: 175 TGLTRVRRFHQDDGHIFCTQEQISAEIMKTLHLIKLVYGVFGLSDYTLMLSTRPDNYVGT 234

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            ++  +    +   +D++       ++   G          ++       QI  +     
Sbjct: 235 LEEWNSAETQLKSVLDQVAPSSWS-IREGDGAFYGPKIDILSRDNYSREHQIGTIQLDFQ 293

Query: 246 IDLEKSMHE 254
           +     +  
Sbjct: 294 LPHRFELKY 302


>gi|288801214|ref|ZP_06406669.1| proline--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331825|gb|EFC70308.1| proline--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 493

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 8/108 (7%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + LS    K Q     LR  GI  +     +K  G   
Sbjct: 293 GLVLPPKLAPIQVVIIPIAKGEEQLSAITEKLQPVISKLRENGISVKFDDSDNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           K+AD   +  P+ ++ G  +     ++I      ++ +  +       
Sbjct: 351 KFADYELKGVPVRLVMGGRDLESNTVEIMRRDTLEKETVSLNGIAEHI 398


>gi|163814284|ref|ZP_02205673.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759]
 gi|158449919|gb|EDP26914.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759]
          Length = 587

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/357 (9%), Positives = 95/357 (26%), Gaps = 12/357 (3%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +      ++    +   K     +   +   V  V     +   +      +   A+ 
Sbjct: 206 MFLPKGYTVWQELENYIKRKERKLGYLHVMTPCVGTVNLYKTSGHWD--HYKDNMFPAME 263

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
           ++   + +   N      I         D       +           L+G++      +
Sbjct: 264 MEGESFVLRPMNCPHHMMIYANKMHSYKDLPIRIAEIAHDFRFEASGTLKGIERGRHFCQ 323

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK--GTIAGEKGFNELVVISE 277
            D+    T    +  E   ++        +  + +   ++         K  ++  + ++
Sbjct: 324 NDSHIFVTPD-QIEEEFAGVVKLIFDTYKDFGITDYRCVLSLRDPEDKVKYHDDDEMWNK 382

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                    + I I  T   G   + G   +  +   V NE              ++D  
Sbjct: 383 AENALRRVLDDIGIDYTEEIGEAAFYGPKLDVNVKPAVGNEYTLSTCQLDFCLPAKFDLK 442

Query: 338 VSRFKGQNV-----PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLS 391
                G+                  +   L+  + +         V +  +  D  D ++
Sbjct: 443 YIDKDGEKKTPVVLHRAILGSLDRFMAYILEETKGNLPTWLAPVQVRVMPVKTDNEDLMA 502

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                   L    +R E+    ++  G +++    +  P  ++ G  E   G +  +
Sbjct: 503 YAHKVVDALDAIDVRVELD-DRAEKLGYRMREGQVQKVPYLLVIGFNEAENGTVSYR 558



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 60/218 (27%), Gaps = 13/218 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   +   + + I+      G+  + TP +   +   K     D     +F 
Sbjct: 202 RGLPMFLPKGYTVWQELENYIKRKERKLGYLHVMTPCVGTVNLY-KTSGHWDHYKDNMFP 260

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR             +         +Y+  P+   E     RF       
Sbjct: 261 AMEMEGESFVLRPMNCP-------HHMMIYANKMHSYKDLPIRIAEIAHDFRFEASGTLK 313

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
               G      D+ + +      E              +  I D          +DK+  
Sbjct: 314 GIERGRHFCQNDSHIFVTPDQIEEEFAGVVKLIFDTYKDFGITDYRCVLSLRDPEDKVKY 373

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
                   D++       ++ +L +   D + +  + A
Sbjct: 374 HD-----DDEMWNKAENALRRVLDDIGIDYTEEIGEAA 406


>gi|298369384|ref|ZP_06980702.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283387|gb|EFI24874.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 648

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 35/112 (31%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   I   +R   +  G+  ++TP +    +  +     D     +F +
Sbjct: 272 GMVFWHPRGWALWQTIEQHMRKELDAAGYREVKTPQIMDK-AFWEKSGHWDNYKDNMF-V 329

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +    +  +    P R    G   RNE  G   
Sbjct: 330 TQSEKREYAVKPMNCPGHVQIFNNSLRSYRDLPMRLAEFGSCHRNEPSGALH 381



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 2/103 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+         +   + L+    R E+ L  ++  G +++   +   P  I
Sbjct: 546 WLAPVQMVVMNITEHQTDYCRQVVERLQAENFRVELDL-RNEKIGYKIRDNSQYRFPYQI 604

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E+    + ++        S  I +  S  +  +A+  +
Sbjct: 605 VVGDKEKQENKVAVR-RKAEDLGSLNIDDFISQLKQEIAESLV 646


>gi|289549217|ref|YP_003474205.1| tRNA synthetase class II (G H P and S) [Thermocrinis albus DSM
           14484]
 gi|289182834|gb|ADC90078.1| tRNA synthetase class II (G H P and S) [Thermocrinis albus DSM
           14484]
          Length = 291

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 70/199 (35%), Gaps = 22/199 (11%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYS--DSLGK 58
           M K   +    P G      ++ R           ++E+  F  I  P +E    +    
Sbjct: 1   MKKAGYI----PEGERFFNFEDSRKLKESFLVACRVFED--FQFIMLPTIENYQPEYYEG 54

Query: 59  FLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
           F  +               G+ + LR D T  L RY+      +  P + +  G VF   
Sbjct: 55  FGVEPFITG------TTGRGEVLCLRSDWTVSLVRYL-SGLRKLDLPKKVFYWGAVFSPS 107

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
                         V+ +G S  TA+A++   +   L+ +GIK  +  + + +  I+  +
Sbjct: 108 GSFERFQ-----TGVEILGISHITAEAQVITKLVQYLKEMGIK--EMVVSVGHTGIVRKL 160

Query: 179 LEKIGLHGDDKLNERLIVL 197
            E  G    ++L  +   L
Sbjct: 161 TETYGTDVKERLMIKDFSL 179


>gi|224090286|ref|XP_002193839.1| PREDICTED: threonyl-tRNA synthetase [Taeniopygia guttata]
          Length = 711

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 34/109 (31%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   Q    AG  A++ +     
Sbjct: 586 ERMIAILTENYGGKWPLWLSPQQVMVVPVGPACDEYAQKVRQHFHDAGFMADVDVDPGCT 645

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              +++ A        ++ G  E++ G + I+         R I +   
Sbjct: 646 LNKKIRNAQIAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTIADTVE 694



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          +  +FS + + 
Sbjct: 333 FLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNV-FNSKLWMTSGHWQHYSDNMFSFEVEK 391

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 392 -EIFALKPMNCPG 403


>gi|55377088|ref|YP_134938.1| prolyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74579418|sp|Q5V5H0|SYP_HALMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|55229813|gb|AAV45232.1| proline-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 484

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 69/259 (26%), Gaps = 19/259 (7%)

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                      A E+    L   + L  +               +    +T    E ++ 
Sbjct: 164 EGHTAHADEDGAWEETMTRLDQYARLYEEVMAMPPLKGRKPPHDKFPGAHTTTTIETLMP 223

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVAL----KSLES 367
                +       G+  G           + +N    T + +    +   +         
Sbjct: 224 DGKTVQAATSHYLGTSFGEAFDITYADADEEENTAHTTSWGLSWRAMGALIMTHSDDQGL 283

Query: 368 STNNIKEMGPVLITTM---DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY- 423
                     V++  +   D+  + +         L  A +R E+     +N G   KY 
Sbjct: 284 VLPPALAPDQVVVVPIWQEDNKDEVIDYAADLAAELDEADVRVELDDREHRNPG--FKYN 341

Query: 424 -ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI---- 478
             +    PL +  G  E   G   +     G+  + +           +  +   +    
Sbjct: 342 EHELHGVPLRVEIGPHEVEDGEATLVHRPDGETETVDRDGIADTVTDHLDTVHAKLYASA 401

Query: 479 -SELVSTVKKILQENKEEI 496
              L   +++   E++EEI
Sbjct: 402 EETLEGEIRE--AESREEI 418


>gi|300120854|emb|CBK21096.2| unnamed protein product [Blastocystis hominis]
          Length = 767

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 27/102 (26%), Gaps = 3/102 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+  +                +  ++  +   Q   Q L     +
Sbjct: 642 HRAILGSVERSFAILLEHFKGKWPFWLSPRQA--IVIPVNATCMEYAQKVRQRLWDNYFQ 699

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           AE+   + +     ++ A        ++ G  E     + I+
Sbjct: 700 AEVD-DTGRTLNKMVREAQLAQFNYILVVGNKEAETDTVTIR 740



 Score = 39.8 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 4/83 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N++++ IR+ Y   G+  + +P +   + L             +F     D
Sbjct: 396 FLPKGAYIYNKLIEFIRHEYHERGYTEVVSPNVYNLE-LWNISGHASHYRDSMFLFN-CD 453

Query: 78  GQWISLRYDLTAPLARYV--AEN 98
                L+             A +
Sbjct: 454 DTEYGLKPMNCPGHCLMFKHAMH 476


>gi|218200880|gb|EEC83307.1| hypothetical protein OsI_28676 [Oryza sativa Indica Group]
          Length = 716

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 70/219 (31%), Gaps = 6/219 (2%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           ++ + VK  +       E+      +  S      +    T  +  +  T  + E   G 
Sbjct: 501 QIKDEVKAVLDFINYVYEIFGFKYELELSTRPEKYLGDIETWNKAEQQLTEALNE--FGK 558

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
           P    +     +G     G +D L  +F+   + A           + L+          
Sbjct: 559 PWQINEGDGAFYGPKIDIGVFDALKRKFQCATLQAI-LGSVERMFAILLEHYNGKWPLWL 617

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                ++ ++   S+S+   +     +  AG    +   + +    +++ A        +
Sbjct: 618 SPRQAIVCSIS--SNSVEYAKQVRARIHEAGFHVAID-ETDRTIQKKVREAQLAQFNYIL 674

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E   G + ++   K +  +  I +  +  +  VA
Sbjct: 675 VVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEEVA 713



 Score = 41.4 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N+++D +R  Y + G+  + +P + Y+  L +         + +F  + + 
Sbjct: 375 FLPHGAIIYNKLMDFLRQQYRDRGYQEVLSPNI-YNMQLWETSGHAANYKENMFVFEIEK 433

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 434 -QEFGLKPMNCPG 445


>gi|124026953|ref|YP_001012273.1| glycyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123977647|gb|ABM79928.1| glycyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 593

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 36/114 (31%), Gaps = 22/114 (19%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGI-RAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           V +  +  D   ++K +   +++  AG            + G +    D    P+A+   
Sbjct: 482 VAVFPLTRDEKLVAKAKEVFRIVLDAGFYPV---YDDDGSIGKRYARVDEIGVPVAVTVD 538

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                   + ++D                       Q+ + I +LV  +++ L 
Sbjct: 539 YQTLEDNTVTLRDRDT------------------WKQVRVSIDKLVDALRRFLN 574



 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYEN--YGF-DPIETPLLEYSDSLGKFL 60
          GF D     +R++ +IL   R+ +     GF   IETP++  S       
Sbjct: 33 GFYDLGPLGVRLKEKILQLWRDFFIRRHAGFVVEIETPIIAPSRVFEASG 82


>gi|57640913|ref|YP_183391.1| glycyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|73919754|sp|Q5JID8|SYG_PYRKO RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
          ligase; Short=GlyRS
 gi|57159237|dbj|BAD85167.1| glycyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 570

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       I+ +I   IR  ++  GF  +ETP +          
Sbjct: 32 RGFYDYGPLGATIKRKIERKIREAFQREGFFELETPDITPEKVFIASG 79



 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 38/116 (32%), Gaps = 4/116 (3%)

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSD--SLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           + ++   +     K+M P+ +  +   +     S      + L+  G  A      +   
Sbjct: 456 LVIEEDRTYLRIKKDMAPIEVAVLPLVAKEPLKSIAYDIFRTLQKEGFIAVYDEKDTVG- 514

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              ++Y D    P  +         G + I+D    +++  +I+         + +
Sbjct: 515 RRYMRY-DEIGTPYCVTVDNQTPEDGTVTIRDRDTREQIRVKIEELPKKLRELIFE 569


>gi|331002910|ref|ZP_08326423.1| glycyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330413203|gb|EGG92577.1| glycyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 462

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/227 (7%), Positives = 58/227 (25%), Gaps = 8/227 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +            +       + + + +  ++     +        +    +        
Sbjct: 237 EWFDYWRSYCINWLTSLGIREDQMRLRDHDKEELSFYSNATTDIEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   ++      +       +  +      ++ A   ++         + LE   
Sbjct: 297 RTDYDLNRHQEVSGQDLTYFDDETSERYIPYVIEPSLGADRVTLAFLCAAYDEEILEGGE 356

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           +         + PV I  +             ++ L +     E       N G + +  
Sbjct: 357 SRTVLRFHPALAPVKIGILPLSKKLNEGALKISEEL-SKYYNVEFD--DRGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           D    P  I       +   + ++D    +++   I   +++ E + 
Sbjct: 414 DEIGTPFCITYDFDSENDNAVTVRDRDSMEQVRIPIAELKNYFEDKF 460


>gi|325578419|ref|ZP_08148554.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160155|gb|EGC72284.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 643

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/346 (11%), Positives = 95/346 (27%), Gaps = 5/346 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFQN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +++   +E    +    N ++       G  Y     +       
Sbjct: 416 IQVKLSTRPEKRIGADDMWDRAEAGLAAALAHNGLEYEIQAGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    +       G      V+    +  P       +G     + + + E +    
Sbjct: 476 REWQCG-TIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+         Q   + L  AG+R +  L  ++  G +++    R  P  
Sbjct: 535 AWLAPVQAVVMNITDSQADYVQKVVKQLSDAGLRVKADL-RNEKVGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           ++ G  E + G + ++        +  I+      +++V Q  + +
Sbjct: 594 LVCGDKEIAEGKVAVRTRKGADLGTFTIEEFAEILKSQVRQRELKL 639



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/167 (7%), Positives = 42/167 (25%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 GDLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V    + +       K
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFQNIQVK 419


>gi|315444753|ref|YP_004077632.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mycobacterium
           sp. Spyr1]
 gi|315263056|gb|ADT99797.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mycobacterium
           sp. Spyr1]
          Length = 695

 Score = 50.2 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 51/480 (10%), Positives = 103/480 (21%), Gaps = 91/480 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   +R  + +  R  +   G++ + TP +   + L       +    G+F 
Sbjct: 282 SGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFVNTPHI-TKEQLYITSGHLEWYADGMF- 339

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF-RQFIQC 131
                                                        +              
Sbjct: 340 -----------------------------PPMQIDAEYNEDGTVRKPGQDYYLKPMNCPM 370

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                 S   +       +          K    H     R +            + +  
Sbjct: 371 HHLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVIHGLTRVRGMTQDDAHIYCTREEMRDE 430

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN---SGDFTKGANLTS-EQIDIMVSFLSID 247
              ++   +D L  +GL    L L     D    S D  + A  T  E  +     L  D
Sbjct: 431 LARLLQFVLDLLADYGLDDFYLELSTKDPDKFVGSDDLWEEATETLREVAESSGLALVPD 490

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
              +     ++            ++  I                S    R        ++
Sbjct: 491 PGGAAFYGPKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTSSDGTRRRPVLIHRALF 550

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
            +I  F  +  +     F                                          
Sbjct: 551 GSIERFFGVLTEHYAGAFPVWLA------------------------------------- 573

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                    PV +  +                LR  GIR E+     +     + + + +
Sbjct: 574 ---------PVQVVGIPVAVAHAGYLDGVAAELRRRGIRVEVDASDDRMAKKIVNHTN-Q 623

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKEL-----SREIKNNESWREARVAQITIPISELV 482
             P  ++ G  +   G +  +      ++      + ++    W   R      P +ELV
Sbjct: 624 KVPFMLLAGDKDVEAGAVSFR-FGDRTQINGVPRDQAVEAIVDWVNRRENAT--PTAELV 680


>gi|332821648|ref|XP_003310808.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 756

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 607 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 666

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 667 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 726

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 727 KVHGERTISETIERLQQLKEFRSKQAE 753



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 378 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 436

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 437 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 482

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 483 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 542

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 543 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 590


>gi|315501868|ref|YP_004080755.1| tRNA synthetase class ii (g h p and s) [Micromonospora sp. L5]
 gi|315408487|gb|ADU06604.1| tRNA synthetase class II (G H P and S) [Micromonospora sp. L5]
          Length = 404

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
              PV +  +  D+          +    AG+RAE+    + + G +++ A RR  P   
Sbjct: 299 WYAPVQLLLLPVDAAQADAAVGLARRAEAAGLRAEVDH--AGSLGARIRDASRRRVPYTG 356

Query: 434 IQGTGERSRGMLQIKDLAKG 453
           + G  E + G + ++ L  G
Sbjct: 357 VLGPREAADGSVSLR-LRDG 375



 Score = 42.1 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 16/47 (34%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          G           R+ + + +R +    G+  + +P L   +   +  
Sbjct: 23 GLPIWLPAGAAARHAVEEYVRELERRAGYQHVYSPPLGKRELFERSG 69


>gi|268608298|ref|ZP_06142025.1| threonyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 646

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 6/113 (5%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +   ++     +    +L+   IRAE       N  N+++       P  +
Sbjct: 539 WLSPMQVGIVPIRTEHNDYAKKVAALLKKNHIRAEADYTDD-NMKNKIRKFKDFKDPYVV 597

Query: 434 IQGTGERSRGMLQIKDLAKGKE-LSREIKNNESWREARVAQITIPISELVSTV 485
           I G  E     + I ++   K+  +  +            + T+   +++ T+
Sbjct: 598 IIGDSEAENEQVSI-NIRGNKQLKNVPLDKFIEMCRTMNEEHTL---DIIDTL 646



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 2/90 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  ++ N +L+  R ++E++G+  I  P+L   + L       D    G+F +
Sbjct: 262 GMPYWLPRGWKLFNALLEYWRGVHEDHGYTEISGPVLSKKE-LWVTSGHWDHYQDGMFVI 320

Query: 74  -QDDDGQWISLRYDLTAPLARYVAENFDTI 102
             ++D +    +        +       + 
Sbjct: 321 PAEEDNEVYCAKPMNCPNAIKVYMNRQRSY 350


>gi|160914239|ref|ZP_02076460.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991]
 gi|158433866|gb|EDP12155.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991]
          Length = 610

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 52/147 (35%), Gaps = 20/147 (13%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              +++  + +    LS  +   +ML   G R
Sbjct: 483 HRVIFGSIERFIGILIEHFAGHFPTWLAPQQIMVVPVHY-EKHLSYAEKVNEMLVQNGFR 541

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +++    ++  G +++ A     P  I+ G GE   G + I+                  
Sbjct: 542 SKLD-ARNEKLGYRIREAQLAKIPYQIVLGDGEEENGTVTIR------------------ 582

Query: 467 REARVAQITIPISELVSTVKKILQENK 493
           R       T+P+   ++ +K+ ++E +
Sbjct: 583 RAQGKDSTTLPLDAFIAMLKEEVEEKR 609



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +RN + +     +    +  I+TP++   + L +     D   + ++  
Sbjct: 234 GMPFFLPNGMILRNILENFWYEEHTKEHYQFIKTPIMMSKE-LWETSGHWDNYKENMYIS 292

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 293 M-VDDREFAIKPMNCPG 308


>gi|332251674|ref|XP_003274971.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 1
           [Nomascus leucogenys]
          Length = 723

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 46/147 (31%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 574 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 633

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 634 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 693

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +++R  Q  
Sbjct: 694 KVHGERTISETIERLQQLKQSRSKQAE 720



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 60/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          +  +FS + + 
Sbjct: 345 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSDNMFSFEVEK 403

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 404 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 449

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 450 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSIFGFSFKLNLSTRPEKFLGDI 509

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 510 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 557


>gi|318041217|ref|ZP_07973173.1| threonyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 570

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +    +           L+ AG+RA +     +  G  ++  ++   P+  + G  
Sbjct: 469 QIRLLPVTDEVRDYAAGVAAELQAAGVRASIDHSGDR-LGKLIRNGEQMKIPVLGVIGAK 527

Query: 439 ERSRGMLQIKDLAKGK 454
           E   G + ++    G 
Sbjct: 528 EAESGQISLRSRRDGD 543



 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I +  R ++   G++ + TP +    SL K     D  ++ +F  
Sbjct: 189 GLVFWHPRGARMRLLIENLWRELHFAAGYELLYTPHVADI-SLWKTSGHLDFYSESMFGP 247

Query: 74  QDDDGQWISLRYD------LT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
              D +   L+        LT A   R           P R   +G V+R E+ G
Sbjct: 248 MQVDEREYQLKPMNCPFHVLTYASTLRSY------RELPIRWAELGTVYRYERPG 296


>gi|313247748|emb|CBY15872.1| unnamed protein product [Oikopleura dioica]
          Length = 538

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I NR+ D IR+ Y   GF  + TP +  S+ L K           +F+ + +D
Sbjct: 326 WLPRGAVIYNRLQDFIRSEYRKRGFKEVVTPNIFNSE-LWKTSGHWQHYEDDMFTFKVED 384

Query: 78  GQWISLRYDLTAP 90
            +W +++      
Sbjct: 385 DKW-AMKPMNCPG 396


>gi|194374367|dbj|BAG57079.1| unnamed protein product [Homo sapiens]
          Length = 756

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 607 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 666

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 667 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 726

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 727 KVHGERTISETIERLQQLKEFRSKQAE 753



 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 378 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 436

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 437 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 482

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 483 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 542

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 543 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 590


>gi|114600746|ref|XP_001153909.1| PREDICTED: hypothetical protein isoform 8 [Pan troglodytes]
          Length = 641

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 492 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 551

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 552 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 611

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 612 KVHGERTISETIERLQQLKEFRSKQAE 638


>gi|33866012|ref|NP_897571.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|73919836|sp|Q7U662|SYT_SYNPX RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33638987|emb|CAE07993.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 611

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 1/96 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +    +     +     L  AG+RA +     +  G  ++  ++   P+  + G  
Sbjct: 509 QVRLLPVTDEVQPYAESLLDQLTQAGVRATIDRSGDR-LGKLIRTGEQMKIPVLAVIGAK 567

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           E  +  + ++    G      + +     E+  +Q 
Sbjct: 568 EAEQNAVSLRSRRDGDLGVAAVADLLRAAESANSQR 603



 Score = 41.4 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 2/109 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I +  R  +   G++ + TP +    SL K     D   + +F  
Sbjct: 229 GLVFWHPRGARMRLLIEEFWRQAHFEGGYELLYTPHVADI-SLWKTSGHLDFYAESMFGP 287

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
            + D +   L+           A    +    P R   +G V+R E+ G
Sbjct: 288 MEVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYERPG 336


>gi|58699380|ref|ZP_00374145.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534103|gb|EAL58337.1| histidyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 100

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 2/95 (2%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
           N        I  +    ++          LR  G+        S     ++K A++ N  
Sbjct: 5   NYSPKEERPIYLIPIGREAEKHALTLANELRRNGLYVIYEY--SGTLRTRMKKANQANAK 62

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            A+I G  E S   L+IK++  G+E      N   
Sbjct: 63  AALIFGDEELSSKTLKIKNMNTGEEKIIARDNTIE 97


>gi|260911583|ref|ZP_05918168.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634289|gb|EEX52394.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 654

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/349 (11%), Positives = 98/349 (28%), Gaps = 17/349 (4%)

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
            +  + +     + +  E  +  +  M       V   +   +  +  R    G + +  
Sbjct: 311 HYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVFAWKPRSYKDLPLRIAEFGTVYRYE 370

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
             G+     R+      D       + VK                      + +  +  F
Sbjct: 371 KSGELHGLTRVRSFTQDDAHIFCRPEQVKNEFLRVMD------------IIQAVFKIFQF 418

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            + + + S+ +     K  I  ++ + E         K      +I        G +   
Sbjct: 419 DNFEAQISLRDPNNTTK-YIGSDEVWEESEQAIIDACKEKGLDAKIAYGEAAFYGPKLD- 476

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
             V +AI     +   Q                  ++     V    F        V ++
Sbjct: 477 FMVKDAIGRRWQLGTIQVDYNLPERFKLEYTAEDNTKKTPVMVHRAPFGSMERFSAVLIE 536

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                         V I  +          Q   + L + G+RA + +  ++  G +++ 
Sbjct: 537 HTTGHFPLWLIPDQVAILPIS--EKFNDYAQRVAKYLDSVGVRATLDV-RNEKIGRKIRD 593

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + +  P  +I G  E   G++ ++    G++ +  ++         VA
Sbjct: 594 NEIKRVPYMVIVGEKEAEEGLVSMRKQGGGEQATMTMEEFAKRINDEVA 642



 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 20/48 (41%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           +G      K   +R R+ D +R I + +G+  + TP +   +      
Sbjct: 263 KGLPIWLPKGTELRLRLQDMLRKIQKRFGYQEVITPHIGSKNLYVTSG 310


>gi|217974767|ref|YP_002359518.1| tRNA synthetase class II [Shewanella baltica OS223]
 gi|217499902|gb|ACK48095.1| tRNA synthetase class II (G H P and S) [Shewanella baltica OS223]
          Length = 398

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 9  AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
           + P G          +   I + +R +Y   GF+ + TP+    + L +     D   +
Sbjct: 18 PQAP-GMIFWHPNGWVLFRDIQEHMRRVYRRNGFEEVNTPVFMKKE-LWQTSGHMDMFAE 75

Query: 69 GVF 71
           +F
Sbjct: 76 NMF 78



 Score = 39.8 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 38/121 (31%), Gaps = 19/121 (15%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +     +  +    +    +     +R  + +  + +   ++K   ++  P 
Sbjct: 296 PDWLHPVPVAIASVNESNSQFVRQLATLCLARDMRVLVDISQN-SVARKMKRFHKQKVPY 354

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            +  G  E +   + +K    G                      IP++EL + +   L+ 
Sbjct: 355 ILTVGDKEEAEKCVSVKCRKDG------------------VMTHIPLAELANYLADKLER 396

Query: 492 N 492
            
Sbjct: 397 K 397


>gi|1464742|gb|AAB04939.1| threonyl-tRNA synthetase [Homo sapiens]
          Length = 712

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 70/228 (30%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K + I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 333 FLPKGVYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 391

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+             +        R++R  P+   +  G  R             
Sbjct: 392 -ELFALKPMNCPG-------HSLMFDHRPRSWRELPLRLADFGGLHRNELSGALTGLTRV 443

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
              +  DA +   M    + +             R +         L+   +  + L  +
Sbjct: 444 RRFQQDDAHIFCAMEQIEDEIKG------CLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 497

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 498 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 545



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 4/124 (3%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R+I  L            + P  +  +          Q   Q    A   A++ L    
Sbjct: 586 ERMIAILTENYGGKLAPFWLSPRQVMVVPVGPTCDEYAQNVRQQFHDAKFMADIDLDPGC 645

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK---GKEL-SREIKNNESWREARV 471
               +++ A        ++ G  E+  G + I+       G+   S  I+  +  +E R 
Sbjct: 646 TLNKKIRNAQLAQYNFILVVGEKEKITGTVNIRTRDNKVHGERTISETIERLQQLKEFRS 705

Query: 472 AQIT 475
            Q  
Sbjct: 706 KQAE 709


>gi|295093898|emb|CBK82989.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus sp.
           ART55/1]
          Length = 587

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/357 (9%), Positives = 95/357 (26%), Gaps = 12/357 (3%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             +      ++    +   K     +   +   V  V     +   +      +   A+ 
Sbjct: 206 MFLPKGYTVWQELENYIKRKERKLGYLHVMTPCVGTVNLYKTSGHWD--HYKDNMFPAME 263

Query: 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGR 219
           ++   + +   N      I         D       +           L+G++      +
Sbjct: 264 MEGESFVLRPMNCPHHMMIYANKMHSYKDLPIRIAEIAHDFRFEASGTLKGIERGRHFCQ 323

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK--GTIAGEKGFNELVVISE 277
            D+    T    +  E   ++        +  + +   ++         K  ++  + ++
Sbjct: 324 NDSHIFVTPD-QIEEEFAGVVKLIFDTYKDFGITDYRCVLSLRDPEDKVKYHDDDEMWNK 382

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                    + I I  T   G   + G   +  +   V NE              ++D  
Sbjct: 383 AENALRKVLDDIGIDYTEEIGEAAFYGPKLDVNVKPAVGNEYTLSTCQLDFCLPAKFDLK 442

Query: 338 VSRFKGQNV-----PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLS 391
                G+                  +   L+  + +         V +  +  D  D ++
Sbjct: 443 YIDKDGEKKTPVVLHRAILGSLDRFMAYILEETKGNLPTWLAPVQVRVMPVKTDNEDLMA 502

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                   L    +R E+    ++  G +++    +  P  ++ G  E   G +  +
Sbjct: 503 YAHKVVDALDAIDVRVELD-DRAEKLGYRMREGQVQKVPYLLVIGFNEAENGTVSYR 558



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 60/218 (27%), Gaps = 13/218 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           RG      K   +   + + I+      G+  + TP +   +   K     D     +F 
Sbjct: 202 RGLPMFLPKGYTVWQELENYIKRKERKLGYLHVMTPCVGTVNLY-KTSGHWDHYKDNMFP 260

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + +G+   LR             +         +Y+  P+   E     RF       
Sbjct: 261 AMEMEGESFVLRPMNCP-------HHMMIYANKMHSYKDLPIRIAEIAHDFRFEASGTLK 313

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
               G      D+ + +      E              +  I D          +DK+  
Sbjct: 314 GIERGRHFCQNDSHIFVTPDQIEEEFAGVVKLIFDTYKDFGITDYRCVLSLRDPEDKVKY 373

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
                   D++       ++ +L +   D + +  + A
Sbjct: 374 HD-----DDEMWNKAENALRKVLDDIGIDYTEEIGEAA 406


>gi|156842346|ref|XP_001644541.1| hypothetical protein Kpol_1052p30 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115186|gb|EDO16683.1| hypothetical protein Kpol_1052p30 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 463

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 62/460 (13%), Positives = 132/460 (28%), Gaps = 83/460 (18%)

Query: 3   KKTKLRAELPR-GFADCPTKEIRIRNRILDSIR-NIYENYGFDPIETPLLEYSDSLGKFL 60
           K+     +    G         +I N+++  ++      +GF  + TP++ Y  SL +  
Sbjct: 46  KQKIFITDPISPGSVFFLPNGAKIFNKLVQFMKLQQEHKFGFKEVITPII-YRKSLWEQS 104

Query: 61  PDEDRPNKGVFSL--QDDDGQWISLRYDLTAPLA-------RYVAENFDTIVFPCRTYRI 111
              +   + +F +  QD   +   L+               R   E    +      +  
Sbjct: 105 GHWENYKEDMFKVEGQDISKEEYGLKPMNCPGHCMIFKKFDRSYHELPLRLSDFSPLH-- 162

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
                    G  R R+F Q D     +  +  +  +  +    L    +   +     ++
Sbjct: 163 RNEASGALSGLTRVRKFHQDDGHIFCTKEQVEEEIIKCLKMVDLCYSRVFNFNKSKNNDS 222

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGAN 231
                  + K+    D  + +  I   A D L        K +L +       +   GA 
Sbjct: 223 ----SSYIIKLSTRPDKYIGDLEIWNHAEDTL--------KSILEKSGKKWDINEGDGAF 270

Query: 232 LTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI 291
               +IDI+V   +    +      +                 + E       + +    
Sbjct: 271 YGP-KIDILVKDHNNKTHQVATIQLDF---------------QLPERFNLRYKDKDNSYK 314

Query: 292 SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP-ATG 350
              ++    + +   + A+L                    G++   ++  +   +P  T 
Sbjct: 315 RPIMIHRAAFGSLERFIAML---------------IDSNEGKWPFWLNPRQAMIIPVNTK 359

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE 408
               +S        L   + ++ ++ PV   +   + D           LR+   G R  
Sbjct: 360 IKSHVSESKQLASKLRGESADLDDLTPVPFNSFHFNVDV---------DLRSEPVGYR-- 408

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                       +K A  +N    II G  E   G   I+
Sbjct: 409 ------------IKDAIMKNYSYLIIIGDEEVETGRYAIR 436


>gi|45185649|ref|NP_983365.1| ACL039Wp [Ashbya gossypii ATCC 10895]
 gi|44981367|gb|AAS51189.1| ACL039Wp [Ashbya gossypii ATCC 10895]
          Length = 724

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +++ +RN Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 342 WLPHGTRIYNNLVELLRNEYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 400

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 401 -ESFGLKPMNCPG 412



 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 11/123 (8%)

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
            Y G  +       P       +G    + A+ +   +      + P  +  +       
Sbjct: 571 EYKGKGNDENAYERPVMIHRALLGSVERMTAILTEHYAGKWPFWLSPRQVLVVPVGVKYQ 630

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGN----QLKYADRRNCPLAIIQGTGERSRGMLQ 446
              Q     L  AG  A+  LGS+         Q+            + G  E +   + 
Sbjct: 631 DYAQQIRDKLVGAGFYADADLGSNTLQKKVRTGQM-----LKYNFIFVVGEQEMNENSVN 685

Query: 447 IKD 449
           I++
Sbjct: 686 IRN 688


>gi|150400672|ref|YP_001324438.1| prolyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|171460849|sp|A6UTK4|SYP_META3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|150013375|gb|ABR55826.1| prolyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 456

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 83/260 (31%), Gaps = 30/260 (11%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +    E        E+       +   +       +R+ + + + +  E+      + 
Sbjct: 146 REIMTFKEAHTAHSTSEEAEA---QVQTALNIYKTFFDRMGVPTIVSQRPEWDKFPGADY 202

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGR---------YDGLVSRFKGQNVPATGFSIGISRLIV 360
            + F  +    K +  G+V   G+         ++              G S  I   I+
Sbjct: 203 TMAFDTIFPDGKTMQIGTVHNLGQHFAKTFELEFETPEGGKDYAYQTCYGISDRIIASII 262

Query: 361 ALKSLESSTNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           AL   E       E+ P  I  +       +  +++K +   + L     R ++     +
Sbjct: 263 ALHGDEKGLILPPEVAPHQIIIIPLLFKGKEEIAMNKAKEIYKSL-KNTYRVKLDDRDIR 321

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +    + +  P+ I  G  +     L I     G++   +  N  +          
Sbjct: 322 -PGKKFNDWELKGAPIRIELGPRDIENNKLTIYRRDTGEKFQIDEDNLLNE--------- 371

Query: 476 IPISELVSTVKKILQENKEE 495
             ++ L+ +++  ++E  E+
Sbjct: 372 --LNTLIDSIENTIKEKAEQ 389



 Score = 38.7 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 6/78 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G         +IR    ++IR++ +    D    P+L   D L K         + V+ 
Sbjct: 25  KGCGVYLPYGFKIRRYAFEAIRDMLDESNHDEALFPMLIPEDLLAKEGEHIKGFEEEVY- 83

Query: 73  LQDDDGQW-----ISLRY 85
                G       ++LR 
Sbjct: 84  WVTHGGTTPLDVKLALRP 101


>gi|147899539|ref|NP_001087812.1| threonyl-tRNA synthetase [Xenopus laevis]
 gi|51895835|gb|AAH81263.1| MGC86352 protein [Xenopus laevis]
          Length = 721

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N+++  IR  Y   GF  + TP + Y+  L +        ++ +FS + + 
Sbjct: 343 FLPKGAYIYNQLIGFIRQEYRKRGFQEVVTPNV-YNSKLWQTSGHWQHYSENMFSFEVEK 401

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 402 -EIFALKPMNCPG 413



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/343 (10%), Positives = 96/343 (27%), Gaps = 8/343 (2%)

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
            I            R R F +    NV +S     +      ++ + +  +++  + +  
Sbjct: 349 YIYNQLIGFIRQEYRKRGFQEVVTPNVYNSKLWQTSGHWQHYSENMFSFEVEKEIFALKP 408

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            N      + +       +                   L G+  +    + D        
Sbjct: 409 MNCPGHCLMFDHRPRSWRELPMRMADFGVLHRNELSGALTGLTRVRRFQQDDAH--IFCA 466

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
                E+I   + FL      ++      +  +   EK   ++ V ++  ++   + N  
Sbjct: 467 MEQIEEEIKSCLDFL--RSVYNVFGFTFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEF 524

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA- 348
                +  G   + G   +  +   +    Q   +        R++       G +    
Sbjct: 525 GEKWVLNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRP 584

Query: 349 ---TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
                  +G    ++A+ +          + P  +  +          Q   +    AG+
Sbjct: 585 VIIHRAILGSVERMIAILTENFGGKWPLWLSPQQVMVVPVGPTCDEYAQQVREQFHRAGL 644

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             ++ L        +++ A        ++ G  E++   + I+
Sbjct: 645 MTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASETVNIR 687


>gi|83319726|ref|YP_424209.1| threonyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|83283612|gb|ABC01544.1| threonyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 639

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 21/143 (14%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  +   L+  +           V I  +     +L    +  Q L+   IR+ + 
Sbjct: 518 IGTYERFIATLLEQTKGVLPLWLAPKQVEIIPIS--ESNLEYANLIHQKLKKEFIRSHID 575

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           L   +    +++ A  +  P  ++ G  E     +  +                  +   
Sbjct: 576 LRDER-LSYKIRDAQTKKVPYQLVLGNKEVENNTITYR------------------QYGS 616

Query: 471 VAQITIPISELVSTVKKILQENK 493
            AQIT+ I E +  +K+ + + K
Sbjct: 617 DAQITVSIQEFIDMLKQQINDKK 639



 Score = 40.6 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 4/79 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          ++N I   +R     Y + P+ETP +   +   K     D   + +F  
Sbjct: 257 GLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIGTVELY-KTSGHWDHYGEDMFQP 315

Query: 74  QDDD---GQWISLRYDLTA 89
            +      +   LR     
Sbjct: 316 FNGGKGSDEQFILRPMNCP 334


>gi|53712976|ref|YP_098968.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60681188|ref|YP_211332.1| threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253563046|ref|ZP_04840503.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265763073|ref|ZP_06091641.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|73919767|sp|Q5LEQ6|SYT_BACFN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|73919768|sp|Q64VP2|SYT_BACFR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|52215841|dbj|BAD48434.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60492622|emb|CAH07394.1| putative threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|251946822|gb|EES87104.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263255681|gb|EEZ27027.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301162677|emb|CBW22224.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 646

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 49/465 (10%), Positives = 112/465 (24%), Gaps = 90/465 (19%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ D +R I   Y +  +                           
Sbjct: 261 KGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEV--------------------------- 293

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                         +T P+                    G   +  K          + +
Sbjct: 294 --------------ITPPI-----------GNKLLYVTSGHYAKYGKDAFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDY--HIGINNRKILDGILEKIGLHGDDKL 190
              +         E+      + + + ++  ++           L G+        DD  
Sbjct: 329 EYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAH 388

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                     + L    +  +     +     +                +     ++ EK
Sbjct: 389 IFCRPDQVKGEFLRVMDIISIVFRSMDFDNFEAQ---------------ISLRDKVNREK 433

Query: 251 SMHELYELVKGTIAGEKGFNE--LVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVY 307
            +       K   A  +   E  L    E    + Y       +   I R  +  T    
Sbjct: 434 YIGSDENWEKAEQAIIEACEEKGLKAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---I 490

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +     P   E +              D    R    +    G    + R +  L    +
Sbjct: 491 QVDYNLPERFELEYMGS----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTA 537

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +  + P  +  +          +     L+   IRA +    ++  G +++  + +
Sbjct: 538 GKFPLW-LTPEQVVILPISEKFNEYAEKVKTYLKMKEIRAIVD-DRNEKIGRKIRDNEMK 595

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             P  +I G  E   G + ++   +G + + + +         V 
Sbjct: 596 RIPYMLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFGEILNEEVQ 640


>gi|256850831|ref|ZP_05556220.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661042|ref|ZP_05861956.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256615893|gb|EEU21081.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547979|gb|EEX23955.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 643

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 62/206 (30%), Gaps = 7/206 (3%)

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
             +E+   S+ + K   +   +           Y      +        +E    +    
Sbjct: 432 ANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT-ALGNDETMSTIQLDF 490

Query: 328 VGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNN-IKEMGPVLITTM 383
           +         V +   ++ P     G    + R I  L  +             V I  +
Sbjct: 491 MLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPEQVEIIPV 550

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
           + D+      +     L   G RAE+    ++  G +++ +  +  P  ++ G  E +  
Sbjct: 551 NLDAHG-EYAKKVRDELLKHGFRAEVDF-RNEKMGYKIRESQTQKVPYTLVLGDDEMNSN 608

Query: 444 MLQIKDLAKGKELSREIKNNESWREA 469
            + ++     K+ S  +       +A
Sbjct: 609 AVNVRPYGTEKQESMSLDKFIDELQA 634



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+  + TP+L   D+  K         + +F  
Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLDAY-KTSGHWAHYREDMFPP 317

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 318 MDMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 377

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A++  ++ D  +   I    + +   + K  D       + 
Sbjct: 378 MTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDEMW 437

Query: 186 GDDKLN 191
              +  
Sbjct: 438 ERSQKM 443


>gi|332300493|ref|YP_004442414.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177556|gb|AEE13246.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 650

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/128 (9%), Positives = 37/128 (28%), Gaps = 3/128 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++                +  +              
Sbjct: 512 NQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLAPDQ--VVILPVSERFNEYANEVA 569

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L    I   +    ++  G +++  + +  P  +I G  E++ G + ++   +G   +
Sbjct: 570 VALSEHDISVSID-DRNEKVGRKIRDNELKRIPYMLIVGEQEQADGTVSVRKQGEGDVGT 628

Query: 458 REIKNNES 465
            +I     
Sbjct: 629 EKISTFAE 636



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 75/260 (28%), Gaps = 11/260 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  ++R ++ D ++ I + YG+  + TP +   +   K      +     F +
Sbjct: 265 GLPLWLPRGTQLRLKLEDFLKRIQKRYGYQQVMTPHIGNVELY-KTSGHYAKYGADSFQV 323

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQC 131
                +G+   L+             + +       +YR  PV   E     R+ Q  + 
Sbjct: 324 ITTPQEGEAFMLKPMNCP-------HHCEIYRLKPHSYRDLPVRLAEFGTVYRYEQSGEL 376

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
                       DA +        E   +K  D    I      +    +I L      +
Sbjct: 377 HGLTRVRGFTQDDAHIFCRPDQVKEEF-LKVMDIIFIIFRALDFENFEAQISLRSQTDRS 435

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKS 251
           + +      D+ ++  ++  +        +       G  L     D +     +   + 
Sbjct: 436 KYIGSEENWDRAEQAIIEACQEAGLPAHVEYDEAAFYGPKLDFMVKDALGRRWQLGTIQV 495

Query: 252 MHELYELVKGTIAGEKGFNE 271
            + L E       GE     
Sbjct: 496 DYNLPERFDLEYTGEDNQKH 515


>gi|255026350|ref|ZP_05298336.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 237

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 133 WDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDRAERA-GVKFADADLI 191

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 192 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 226


>gi|255017946|ref|ZP_05290072.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 248

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 144 WDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDRAERA-GVKFADADLI 202

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 203 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 237


>gi|118444423|ref|YP_877137.1| glycyl-tRNA synthetase [Clostridium novyi NT]
 gi|118134879|gb|ABK61923.1| glycyl-tRNA synthetase [Clostridium novyi NT]
          Length = 463

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 28/103 (27%), Gaps = 3/103 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + P     +        K       L +      +    + + G + +  D    
Sbjct: 363 HLHPALAPFKAAILPLSKKLSEKALDVYAKL-SKKFN--IDYDEAGSIGKRYRREDEIGT 419

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P  I           + ++D     ++   I   E + E +V 
Sbjct: 420 PYCITVDFDTLEDNTVTVRDRDNMTQIRLSIDELEKFLEEKVQ 462


>gi|78184510|ref|YP_376945.1| threonyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123757112|sp|Q3AYC6|SYT_SYNS9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78168804|gb|ABB25901.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Synechococcus
           sp. CC9902]
          Length = 611

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +    D     +     L+TAGIRA +     +  G  ++  ++   P+  + G  
Sbjct: 509 QIRLLPVTDDVQPYAEQVLNQLKTAGIRATIDQSGDR-LGKIIRTGEQMKIPVLAVIGAK 567

Query: 439 ERSRGMLQIKDLAKGK 454
           E  +  + ++    G 
Sbjct: 568 EAEQNAISLRSRRDGD 583



 Score = 41.4 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 2/109 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I D  R  +   G++ + TP +    SL K     D   + +F  
Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPHVADI-SLWKTSGHLDFYAESMFGP 287

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
              D +   L+           A    +    P R   +G V+R E+ G
Sbjct: 288 MQVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYERPG 336


>gi|49475537|ref|YP_033578.1| threonyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|73919770|sp|Q6G3K1|SYT_BARHE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|49238343|emb|CAF27567.1| Threonyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 658

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 48/384 (12%), Positives = 110/384 (28%), Gaps = 17/384 (4%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R                +D                M   + A 
Sbjct: 268 FWHKKGWKMFQNLINYMRRRLDDHQYAEVNAPQVLDRSLWEISGHWEWYKENMFKAIPAA 327

Query: 159 GIKRNDYHI---GINNRKILDGILEKIGLHGD--DKLNERLIVLRAIDKLDKFGLQGVKL 213
               N+       +N    +      +  + D   ++ E  +V R        GL  V+ 
Sbjct: 328 EDWDNENVYALKPMNCPGHVQIFKHGLKSYRDLPTRIAEFGVVHRYEPSGSLHGLMRVR- 386

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGF 269
                  D++  F     L  E ++I    LS   +    E+   +          +  +
Sbjct: 387 ---CFTQDDAHIFCTDEQLADECLNINDLILSTYADFGFKEISLKLSTRPEKRVGSDALW 443

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
           +    I E V K+    +  +I ++I+ G   + G  +E  L   +  E Q         
Sbjct: 444 DHAENIMESVLKTIETKSAGQIKTSILPGEGAFYGPKFEYTLKDAIGREWQCGTTQLDFN 503

Query: 330 GGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
              R++        +            G     + +     S +      P  I      
Sbjct: 504 LPERFNAFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFSGHMPLWFAPEQIVVATIT 563

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           S++    +  T  L++ G+   + L  ++    +++    +  P+ ++ G  E     + 
Sbjct: 564 SEANEYAKKLTAKLKSVGLSTTLDL-RNEKINYKIREHSLQKVPVILVCGKRESETNSVN 622

Query: 447 IKDLAKGKELSREIKNNESWREAR 470
           ++ L   +++   ++      +  
Sbjct: 623 MRRLGSTEQIFLSVEEVIEQLKNE 646


>gi|42523121|ref|NP_968501.1| hypothetical protein Bd1617 [Bdellovibrio bacteriovorus HD100]
 gi|73919772|sp|Q6MML0|SYT_BDEBA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|39575326|emb|CAE79494.1| thrS [Bdellovibrio bacteriovorus HD100]
          Length = 656

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 2/86 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    M PV +  ++      S  +     L+   +R E     ++    +++ A  +  
Sbjct: 540 HLPPWMMPVQVAILNVTDRVNSFCEELQNSLKGHSVRVEFD-RRNEKLNYKIREAQLQKI 598

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKE 455
           P  II G  E     + ++ L  G E
Sbjct: 599 PYMIIVGDKEAESRTVSLR-LRDGSE 623



 Score = 39.8 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 43/154 (27%), Gaps = 9/154 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           EL  G      K   + N +   +R +Y   G+  + TP +   +             + 
Sbjct: 266 ELAPGSPFFTGKGATVYNSLQTYLRELYFETGYQEVITPQIFDVNLFHTS-GHYQNYKEN 324

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +F     D +  + +             +         +YR  P+   +     R+ +  
Sbjct: 325 MF-FTKVDERDFASKPMNCPS-------HCLLYNSEKYSYRDLPIKMADFGRLHRYEKSG 376

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
                    +    DA +   M    E +    N
Sbjct: 377 AMHGLTRVRTFCQDDAHIFCRMDQLQEEIAKFMN 410


>gi|171185885|ref|YP_001794804.1| glycyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935097|gb|ACB40358.1| glycyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 583

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 35/110 (31%), Gaps = 4/110 (3%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +   S+ +   +   + L   G             G++    D    PLA+     
Sbjct: 478 CILPIVKKSEYVEIGKRLARRLAQEGFYV--LYEDDGTIGSRYALCDEIGTPLAVTIDEK 535

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
             + G + ++D    +++  + +  +++          P  E    ++  
Sbjct: 536 TPAEGTVTVRDRDTRRQVRVKTEQVQAFVALVTRGT--PFQEAAEALEAR 583



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 5/51 (9%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFD----PIETPLLEYSDSLGKFL 60
          GF D     ++IR  I++  R ++    +      +ETP++          
Sbjct: 29 GFYDYGPLGVQIRRNIVEKWRRVFVLP-YQETIVEVETPVVMPEPVFKASG 78


>gi|148239112|ref|YP_001224499.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166225511|sp|A5GJT7|SYT_SYNPW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|147847651|emb|CAK23202.1| Threonyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 610

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/96 (11%), Positives = 32/96 (33%), Gaps = 1/96 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +    +     +     L  AG+RA +     +  G  ++  ++   P+  + G  
Sbjct: 509 QVRLLPVTDEVQPYAESLLDQLTQAGVRATIDRSGDR-LGKLIRTGEQMKIPVLAVIGAK 567

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           E  +  + ++    G      + +     +   +Q 
Sbjct: 568 EAEQNAVSLRSRRDGDLGVVAVADLLRAAQNANSQR 603



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 2/109 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I +  R  +   G++ + TP +    SL K     D   + +F  
Sbjct: 229 GLVFWHPRGARMRLLIEEFWRQAHFEGGYELLYTPHVADI-SLWKTSGHLDFYAESMFGP 287

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
            + D +   L+           A    +    P R   +G V+R E+ G
Sbjct: 288 MEVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYERPG 336


>gi|308464804|ref|XP_003094666.1| CRE-PARS-2 protein [Caenorhabditis remanei]
 gi|308247063|gb|EFO91015.1| CRE-PARS-2 protein [Caenorhabditis remanei]
          Length = 470

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +GF        R+ +++   +   ++  G   I  P++  + +L       D     +  
Sbjct: 37  KGFYSLLPLGQRVIDKLCRILDTEFQKAGAMKIGMPIV-GTKTLWDKTKRWDAMGTEMIK 95

Query: 73  LQDDDGQWISLRY 85
           L+D     + L+ 
Sbjct: 96  LEDRQKAPLCLQP 108


>gi|301156314|emb|CBW15785.1| threonyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 643

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/346 (11%), Positives = 95/346 (27%), Gaps = 5/346 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFQN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +++   +E    +    N ++       G  Y     +       
Sbjct: 416 IQVKLSTRPEKRIGADDMWDRAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    +       G      V+    +  P       +G     + + + E +    
Sbjct: 476 REWQCG-TIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+         Q   + L  AG+R +  L  ++  G +++    R  P  
Sbjct: 535 AWLAPVQAVVMNITDSQADYVQKVVKQLSDAGLRVKADL-RNEKVGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           ++ G  E + G + ++        +  I+      +++V Q  + +
Sbjct: 594 LVCGDKEIAEGKVAVRTRKGADLGTFTIEEFAEILKSQVRQRELKL 639



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/167 (7%), Positives = 42/167 (25%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 GDLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V    + +       K
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFQNIQVK 419


>gi|289830169|ref|ZP_06547591.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
          Length = 290

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 179 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 237

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 238 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 284


>gi|300787200|ref|YP_003767491.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299796714|gb|ADJ47089.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 675

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 9/116 (7%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           PV +  +   +D +   Q   + LR  G+RAE+     +    +++    +  P  ++ G
Sbjct: 564 PVQVVGIPITADQVEYLQDVEKALRAKGLRAEVDASDDR-MQKKIRTHTTQKVPFMLLAG 622

Query: 437 TGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELVSTVKK 487
             +   G +  +    G +     + + ++    W E R      P +E + T+ +
Sbjct: 623 AKDVEAGAVSFR-FRDGGQINGVPVEKAVEAIAEWVERRENAS--PSAEALETIVR 675



 Score = 37.1 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
            G      K   IR  + +  R  +E  G++ + TP +   +      
Sbjct: 283 SGLPVFHPKGGIIRRELENYSRRRHEEAGYEFVNTPHISKGELFHTSG 330


>gi|260775804|ref|ZP_05884700.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608220|gb|EEX34389.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 392

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 3  KKTKL--RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          K+ KL   +E   G  D   K   +  ++   IR++ + YG+  + +P+L          
Sbjct: 10 KQLKLFDISESVSGMVDWYPKGHELYRKVQAYIRSVQKRYGYHEVRSPVLANHSVWTTS- 68

Query: 61 PDEDRPNKGVFSLQDDD 77
             ++  + +F + + +
Sbjct: 69 GHNEKYGENMFHVPEHN 85



 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 81/309 (26%), Gaps = 9/309 (2%)

Query: 156 EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
               +  ++  +   +      +  ++     +                   L G+   L
Sbjct: 77  NMFHVPEHNLSVKPMSCPFHISMFNELVSSYRELPYRIAEFGLCHRNESSGSLNGLFR-L 135

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT--IAGEKGFNELV 273
                D+   F +   +  E          +            VK +     + G +EL 
Sbjct: 136 RAFNQDDGHIFCQEQQIKDELKHFCAMLFEMYEHFGFSRKDISVKISLRPKNKIGSDELW 195

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGG 330
             SEL  + G +   I        G  Y     +          +               
Sbjct: 196 SRSELYLQEGLDELGIGYELLPGEGAFYGAKVEFSLKDSLDRHWQCGTFQLDFFLSEKFD 255

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
               + L        +           + + L+  +       +  P  +  +    +  
Sbjct: 256 SSFINELGDSEYPVVLHRAALGSLERFIAILLEHYKGRLP--VQFNPYAVVLVPLTVEHQ 313

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
           +      + L   GI   +   S  + G +++ + +  C   I+ G  E    +L +K  
Sbjct: 314 AYCHELQEQLGAMGIACIID-DSDNSVGYRVRQSYKMKCNYLIVIGDDELKSDVLGLKSG 372

Query: 451 AKGKELSRE 459
              KE+SRE
Sbjct: 373 KDVKEVSRE 381


>gi|198275440|ref|ZP_03207971.1| hypothetical protein BACPLE_01604 [Bacteroides plebeius DSM 17135]
 gi|198271069|gb|EDY95339.1| hypothetical protein BACPLE_01604 [Bacteroides plebeius DSM 17135]
          Length = 513

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/266 (7%), Positives = 58/266 (21%), Gaps = 29/266 (10%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+    E    E+   VK     +       +  +  +  G+  +  +           
Sbjct: 256 QFIFRMREFEQMEMQFFVKPGTELDWFKKWKEIRLKWHKALGFGDDHYRYHDHEKLAHYA 315

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGG--------RYDGLVSRFKGQNVPATGFSI 353
                 E ++ F     +                     +Y                   
Sbjct: 316 NAATDIEFLMPFGFKEVEGIHSRTNFDLSQHEKFSGKSIKYFDPEINESYTPYVIETSIG 375

Query: 354 GISRLIVALKSLESSTNNIKEMGPVL-------------ITTMDHDSDSLSKYQMYTQML 400
                +  + +             V+             +  +        K +     L
Sbjct: 376 VDRMFLSVMSAAYHEEKLENGETRVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIVNDL 435

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
                  +       + G + +  D    P  I           + +++    ++    I
Sbjct: 436 -KFHFNCQ--YDEKDSIGKRYRRQDAIGTPYCITIDHQTLEDNCVTLRNRDTMEQERVAI 492

Query: 461 KNNESWREARVAQITIPISELVSTVK 486
            +  +    +     + I+ L+ T++
Sbjct: 493 ADLNNIIADK-----VSITSLLKTLQ 513


>gi|196247599|ref|ZP_03146301.1| Anticodon-binding domain protein [Geobacillus sp. G11MC16]
 gi|196212383|gb|EDY07140.1| Anticodon-binding domain protein [Geobacillus sp. G11MC16]
          Length = 298

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 20/123 (16%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              ++      L+T      +     + + + L  AG    ++    +  G +   +D  
Sbjct: 195 WPVSVAPFHVHLLTANAKSDEQRMLAEEWYEKLGQAGFDV-LYDDRPERAGVKFADSDLI 253

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             PL +  G    S G++++K    G+                     +P+ EL+ TV++
Sbjct: 254 GIPLRVTVGKR-ASEGVVEVKVRKTGE------------------TFDVPVGELIETVRR 294

Query: 488 ILQ 490
           +LQ
Sbjct: 295 LLQ 297


>gi|282934500|ref|ZP_06339755.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|281301447|gb|EFA93736.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 644

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 62/206 (30%), Gaps = 7/206 (3%)

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
             +E+   S+ + K   +   +           Y      +        +E    +    
Sbjct: 433 ANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKT-ALGNDETMSTIQLDF 491

Query: 328 VGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNN-IKEMGPVLITTM 383
           +         V +   ++ P     G    + R I  L  +             V I  +
Sbjct: 492 MLPERFDLSYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPEQVEIIPV 551

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
           + D+      +     L   G RAE+    ++  G +++ +  +  P  ++ G  E +  
Sbjct: 552 NLDAHG-EYAKKVRDELLKHGFRAEVDF-RNEKMGYKIRESQTQKVPYTLVLGDDEMNSN 609

Query: 444 MLQIKDLAKGKELSREIKNNESWREA 469
            + ++     K+ S  +       +A
Sbjct: 610 AVNVRPYGTEKQESMSLDKFIDELQA 635



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I   I +     G+  + TP+L   D+  K         + +F  
Sbjct: 260 GLPYWMPKGATIRRVIERYIIDKELADGYQHVYTPVLMNLDAY-KTSGHWAHYREDMFPP 318

Query: 74  QDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPGRF 125
            D   G+ + LR        +    +  +    P R   +G + R EK          R 
Sbjct: 319 MDMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALSGLQRVRE 378

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                          +   A++  ++ D  +   I    + +   + K  D       + 
Sbjct: 379 MTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDEMW 438

Query: 186 GDDKLN 191
              +  
Sbjct: 439 ERSQKM 444


>gi|309973051|gb|ADO96252.1| Threonyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 643

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 99/366 (27%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L   G+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
            +L++ 
Sbjct: 637 LKLLNE 642



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|318605898|emb|CBY27396.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 642

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 102/356 (28%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G ++L   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDLWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           ++ G  E   G + ++        +R  K+  S        + + + +L++ ++  
Sbjct: 594 LVCGDKEVESGKIAVR--------TRRGKDLGSLD------VNVVVDQLLAEIRSR 635



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA D L     +
Sbjct: 425 EKRIGSDDLWTRAEDDLAAALTE 447


>gi|291548182|emb|CBL21290.1| prolyl-tRNA synthetase, family I [Ruminococcus sp. SR1/5]
          Length = 479

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 26/169 (15%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD---SDS 389
           +Y    +  K  +  + G +  +   I+ +    S       + PV    +         
Sbjct: 247 QYTDKDNTLKYVHQTSWGMTTRMIGAIIMVHGDNSGLVLPPRIAPVQTVIIPIQQRKEGV 306

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR--RNCPLAIIQGTGERSRGMLQI 447
           + K       L+ AGIRA++   + K+ G   K+A++  R  PL +  G  +   G   +
Sbjct: 307 MEKADELLAALKAAGIRAKVD-ATDKSPG--FKFAEQEMRGIPLRVECGPKDIENGQAVL 363

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                 ++                   T+   EL   VK++L   + ++
Sbjct: 364 CRRDTREK------------------YTVSFEELADKVKELLDTIQHDM 394


>gi|254568978|ref|XP_002491599.1| Mitochondrial threonyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238031396|emb|CAY69319.1| Mitochondrial threonyl-tRNA synthetase [Pichia pastoris GS115]
          Length = 461

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 10/114 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ N+++  ++   + +GFD + TPL+ Y   L +     D   + ++ +
Sbjct: 64  GSVFFLPHGTRLFNKLVQFMKIQQKKHGFDEVITPLI-YKKKLWEISGHWDNYKEDMYRV 122

Query: 74  Q-------D-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           +       D  D +   L+            + FD  +             +  
Sbjct: 123 EGNEVSHGDAKDEETFGLKPMNCPGHCLIY-KRFDRSINELPIRYSDWSSLHRN 175


>gi|223041833|ref|ZP_03612022.1| prolyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017360|gb|EEF15782.1| prolyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 263

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M       +  +   + L+  G+         +  G      +    P  ++ G    
Sbjct: 172 MNMHKSEKVQAFAEELYKTLKAQGVDVIFDDRKER-PGVMFADMELIGVPHMVVIGEKNL 230

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G ++ K+   G++     +   ++    V 
Sbjct: 231 ENGEIEYKNRRTGEKQMIAKEQLLAFLAENVK 262


>gi|219851928|ref|YP_002466360.1| threonyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|254783527|sp|B8GHN2|SYT_METPE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219546187|gb|ACL16637.1| threonyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 609

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/343 (12%), Positives = 93/343 (27%), Gaps = 21/343 (6%)

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
             +   +    + A  E      +          +  +       +  I+  + +  +  
Sbjct: 244 PVETPVMYDLGDKAIYEHADKFGERQYRFKSGNRNMMLRFAACFGMFSIMRDMHISPNTL 303

Query: 190 LNER----LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             +         R   + +  GL+ ++            D     +   EQ+      L 
Sbjct: 304 PIKMYELSTYSFRHEQRGEVIGLKRLRAFTMPDMHSLCLDMEGALHCFEEQLR-----LG 358

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
               +      ELV         + +     + +         I+I S  V         
Sbjct: 359 WKSGEDFET--ELVGVFRCTRGFYEKYENWVKSIVAESRVPMLIEILSDRVHYWIAKVDL 416

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK-- 363
                 G P+ N   +  V  S     +Y           +  +        +   L+  
Sbjct: 417 AAIDGQGRPIENPTVQIDVESSTRFDIKYHLDGEVVHPPILHCSPTGSIERVICALLENT 476

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
           + +S       + P  +  +       S        L  A IR ++     ++ G +++ 
Sbjct: 477 ANQSVPQLPAWLAPTQVRLIPVAERHTSFADELCTRLNKAQIRTDLD-DREESVGKKVRE 535

Query: 424 ADRRNCPLAIIQGTGERSRG--MLQIKDLAK-----GKELSRE 459
           A     P  I+ G  E   G   + I+ L++      ++L  E
Sbjct: 536 AGMDWVPYVIVIGDAEMETGKLTVTIRKLSEPRVPHKEQLDVE 578



 Score = 41.0 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 61/213 (28%), Gaps = 26/213 (12%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL-PDEDRPNKGVFSLQDD 76
              +   +R+ + D + ++   YG  P+ETP++   D   K +    D+  +  +  +  
Sbjct: 218 WLPRGKIVRDLLADYVLHMVLEYGGSPVETPVM--YDLGDKAIYEHADKFGERQYRFK-S 274

Query: 77  DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
             + + LR+                            +            +  +    + 
Sbjct: 275 GNRNMMLRF-------------------AACFGMFSIMRDMHISPNTLPIKMYELSTYSF 315

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
                     +  + A T+  +     D    ++     +  L      G+D   E + V
Sbjct: 316 RHEQRGEVIGLKRLRAFTMPDMHSLCLDMEGALHC---FEEQLRLGWKSGEDFETELVGV 372

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            R      +     VK ++ E R     +    
Sbjct: 373 FRCTRGFYEKYENWVKSIVAESRVPMLIEILSD 405


>gi|148826837|ref|YP_001291590.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166223345|sp|A5UEK1|SYT_HAEIG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148718079|gb|ABQ99206.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 643

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 99/366 (27%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L   G+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
            +L++ 
Sbjct: 637 LKLLNE 642



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|123442189|ref|YP_001006170.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166225517|sp|A1JMJ9|SYT_YERE8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122089150|emb|CAL11992.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 642

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 102/356 (28%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G ++L   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDLWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           ++ G  E   G + ++        +R  K+  S        + + + +L++ ++  
Sbjct: 594 LVCGDKEVESGKIAVR--------TRRGKDLGSLD------VNVVVDQLLAEIRSR 635



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA D L     +
Sbjct: 425 EKRIGSDDLWTRAEDDLAAALTE 447


>gi|116070824|ref|ZP_01468093.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. BL107]
 gi|116066229|gb|EAU71986.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. BL107]
          Length = 615

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +    D     +     L+TAGIRA +     +  G  ++  ++   P+  + G  
Sbjct: 509 QIRLLPVTDDVQPYAEQLLDQLKTAGIRATIDQSGDR-LGKIIRTGEQMKIPVLAVIGAK 567

Query: 439 ERSRGMLQIKDLAKGK 454
           E  +  + ++    G 
Sbjct: 568 EAEQNAVSLRSRRDGD 583



 Score = 41.4 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 2/109 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I D  R  +   G++ + TP +    SL K     D   + +F  
Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPHVADI-SLWKTSGHLDFYAESMFGP 287

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
              D +   L+           A    +    P R   +G V+R E+ G
Sbjct: 288 MQVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYERPG 336


>gi|295109870|emb|CBL23823.1| glycyl-tRNA synthetase, dimeric type [Ruminococcus obeum A2-162]
          Length = 464

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/229 (7%), Positives = 60/229 (26%), Gaps = 10/229 (4%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     ++      + V   +  ++     ++       +    +        
Sbjct: 237 EWFAYWKKFCLDWLSSLGLKEDEVRYRDHDKEELSFYSKATTDVEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI---VALKSLE 366
              + +   +       +     +    +      ++ A    +           L + +
Sbjct: 297 RTDYDLTQHQNVSGQDLTYFDDEKKQKYIPYVIEPSLGADRMVLAFLCSAYDEEVLDAEK 356

Query: 367 SS----TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +      +    + PV I  +          +   Q L +     E       N G + +
Sbjct: 357 NDVRTVLHFHPVLAPVKIGVLPLSKKLNEGAEKIYQQL-SKKYNCE--YDDRGNIGKRYR 413

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             D    P  I       + G + ++D    +++  +I   +++   + 
Sbjct: 414 RQDEIGTPFCITYDFESENDGAVTVRDRDTMEQVRIKIDELDAYFADKF 462


>gi|15897489|ref|NP_342094.1| prolyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174806|ref|ZP_06388775.1| prolyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|74581610|sp|Q9UWX2|SYP_SULSO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|6015904|emb|CAB57731.1| prolyl (glutamyl) tRNA synthetase [Sulfolobus solfataricus P2]
 gi|13813734|gb|AAK40884.1| Prolyl -tRNA synthetase (proS) [Sulfolobus solfataricus P2]
 gi|261602249|gb|ACX91852.1| prolyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 481

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/256 (10%), Positives = 67/256 (26%), Gaps = 26/256 (10%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +++              E+       I + +      S R +          Y    + 
Sbjct: 160 FKEAHTVHETYDDAQKQVEEAIEIYKKIFDTLTIPYVLSERPEWDRFAGALHTYAFDTIM 219

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                   +          S     +           +  + G S      ++A+   + 
Sbjct: 220 -PDGRAMQIGTVHHLGQNFSKALDFKIQKKDGSLDYPHQTSYGISDRAVASVIAIHGDDH 278

Query: 368 STNNIKEMGPVLITTMDHDSDS-------LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                  + P+ +  +   + +       +       +M     I       + K  G +
Sbjct: 279 GPVLPPSVAPIKVVVIPIPAKNEEETQQVMKYSIEICEMFNKNNITCLTDQDTEKTPGEK 338

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               + +  P+ +  G  E   G + IK                  R       T+   E
Sbjct: 339 FYIWEIKGVPIRLEIGPRELISGTVFIK------------------RRDNFKSYTVRKEE 380

Query: 481 LVSTVKKILQENKEEI 496
            ++ +K++L E +E++
Sbjct: 381 AINKIKELLNEIQEDL 396



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 61/191 (31%), Gaps = 13/191 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         ++R  I+  IRN  ++ G + +  PLL   D L +         + V
Sbjct: 32  PIKGMGVWMPYGFKLRQNIIGIIRNFLDSTGHEEVLFPLLIPEDLLRRESTHIKGFEEEV 91

Query: 71  FSLQDDDGQW-----ISLRYDLTAPLARYVAENFDTIVFPC---RTYRIGPVFRNEKHGP 122
           F      G       ++LR   T+ +A    EN     +     + Y+I  VFR E    
Sbjct: 92  F-WVTKGGSTDLDVKLALRP--TSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKAT 148

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI--NNRKILDGILE 180
               +  +        +      +    + + +E      +   I    + R   D    
Sbjct: 149 RPMIRLREITTFKEAHTVHETYDDAQKQVEEAIEIYKKIFDTLTIPYVLSERPEWDRFAG 208

Query: 181 KIGLHGDDKLN 191
            +  +  D + 
Sbjct: 209 ALHTYAFDTIM 219


>gi|116207946|ref|XP_001229782.1| hypothetical protein CHGG_03266 [Chaetomium globosum CBS 148.51]
 gi|88183863|gb|EAQ91331.1| hypothetical protein CHGG_03266 [Chaetomium globosum CBS 148.51]
          Length = 677

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 1/95 (1%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              VLI  +    D     +  +Q LR+AGI + +   SS + G +    D    P  I 
Sbjct: 555 PTKVLIVPLSSHKDFAPAVRKLSQKLRSAGISSRVD-DSSASIGKRYSRNDELGTPFGIT 613

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                     + +++    +++  E         A
Sbjct: 614 VDFQTVKDDTITLRERDSTRQVRAEEDKIIEAIRA 648


>gi|84500126|ref|ZP_00998392.1| ATP phosphoribosyltransferase regulatory subunit [Oceanicola
           batsensis HTCC2597]
 gi|84392060|gb|EAQ04328.1| ATP phosphoribosyltransferase regulatory subunit [Oceanicola
           batsensis HTCC2597]
          Length = 373

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 105/329 (31%), Gaps = 38/329 (11%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVA 96
           +E  G  P+E P+L  + +L     ++ R    V S      Q +  R D T P+   V 
Sbjct: 26  FEAAGAAPVECPILLPAATLLDLYGEDIRARAYVTSDALRGEQMM--RPDFTVPV---VE 80

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETA------------- 143
            +      P R    G VFR ++    R  +++Q  V+    S   A             
Sbjct: 81  MHMAGGAEPARYTYAGEVFRRQEEDEARANEYLQVGVEIFDGSDPAAADAEVFALVRAAT 140

Query: 144 ----------DAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  + M     L     ++      I   +    +L++     +   +  
Sbjct: 141 GGMQLRAATGDIGILMAAVGGLRTSAPRKAALMRHIWRPRRFRALLDRFAGRSEVPASRA 200

Query: 194 LIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSID--LEK 250
            ++  A          G++  +  E R +          ++  ++ ++ + LS+   L  
Sbjct: 201 SLLAAADPFAGAGPDIGLRSRVEVEARIEALRADAGTPPISEREVALIDAVLSVRETLPY 260

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           ++  L ++     A  +    L   +E +   G ++  +   +   R          E  
Sbjct: 261 ALENLRDIAVDMPAISEAVAGLAARAEALEARGIDTAALDFEAAYGR-------THMEYY 313

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
            GF              V  GGRYD L  
Sbjct: 314 DGFVFGLYAGTRPDLPPVATGGRYDALTR 342


>gi|145629552|ref|ZP_01785350.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145632888|ref|ZP_01788621.1| threonyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|145639038|ref|ZP_01794646.1| threonyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145641382|ref|ZP_01796961.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144978395|gb|EDJ88159.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144986544|gb|EDJ93110.1| threonyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|145272010|gb|EDK11919.1| threonyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145273925|gb|EDK13792.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
 gi|309750996|gb|ADO80980.1| Threonyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 643

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 99/366 (27%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L   G+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
            +L++ 
Sbjct: 637 LKLLNE 642



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|322657153|gb|EFY53436.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322686288|gb|EFY82272.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
          Length = 290

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 179 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 237

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 238 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 284


>gi|213645917|ref|ZP_03375970.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 249

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 138 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 196

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 197 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 243


>gi|116250652|ref|YP_766490.1| ATP phosphoribosyltransferase regulatory subunit [Rhizobium
          leguminosarum bv. viciae 3841]
 gi|166219841|sp|Q1MKX9|HISZ_RHIL3 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|115255300|emb|CAK06375.1| putative ATP phosphoribosyltransferase regulatory subunit
          [Rhizobium leguminosarum bv. viciae 3841]
          Length = 373

 Score = 50.2 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 31 DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
          + +   +     + I+TP+++ ++       ++ R  + +F  + + G  + LR + T P
Sbjct: 11 NDLIAEFVERNAERIDTPVIQPAEPFLDIAGEDLR--RRIFMTESETGASLCLRPEFTIP 68

Query: 91 LA 92
          + 
Sbjct: 69 VC 70


>gi|332251678|ref|XP_003274973.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 3
           [Nomascus leucogenys]
          Length = 619

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 46/147 (31%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 470 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 529

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 530 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 589

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +++R  Q  
Sbjct: 590 KVHGERTISETIERLQQLKQSRSKQAE 616



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 60/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          +  +FS + + 
Sbjct: 241 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSDNMFSFEVEK 299

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 300 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 345

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 346 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSIFGFSFKLNLSTRPEKFLGDI 405

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 406 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 453


>gi|319408458|emb|CBI82113.1| Threonyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 659

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 51/381 (13%), Positives = 111/381 (29%), Gaps = 14/381 (3%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET-ADAEMCMMMADTLE 156
               +     +Y    +  ++       +   +   +  G       +       AD  +
Sbjct: 272 KGWKMFQNLISYMRRRLDDHKYDEVNAPQVLDKSLWEISGHWGWYKENMFQTTPAADDWD 331

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
              I          + +I    L+        +L E  IV R        GL  V+    
Sbjct: 332 DQCIYALKPMNCPGHVQIFKHGLKSY-RDLPIRLAEFGIVHRYEPSGSLHGLMRVRS--- 387

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
               D++  F     L  E ++I    LS   +    E+            G +EL    
Sbjct: 388 -FTQDDAHIFCTDEQLADECLNINDLILSTYADFGFEEISLKFSTRPEKRVGSDELWDHC 446

Query: 277 ELVR----KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
           E +     K+    +  +I ++I+ G   + G  +E  L   +  E Q            
Sbjct: 447 EDIMLSVLKTIEKKSEGRIKTSILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPE 506

Query: 333 RYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
           R+         +           +G     + +     S +    + P  +      S++
Sbjct: 507 RFGAFYIDKDSEKRQPVMIHRAILGSMERFLGILIENFSGHMPLWLAPQQVVVAPITSEA 566

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
               +  T+ L+  G+ A   L  ++    +++    +  P+ ++ G  E     + ++ 
Sbjct: 567 NEYAEKITKKLKAIGLSATADL-RNEKINYKIREHSLQKVPVILVCGKRESETNSVSMRR 625

Query: 450 LAKGKELSREIKNNESWREAR 470
           L    +    I+         
Sbjct: 626 LGSTDQTVLSIEEVMKQLSNE 646


>gi|313665156|ref|YP_004047027.1| threonine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949904|gb|ADR24500.1| threonine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 639

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 46/143 (32%), Gaps = 21/143 (14%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  +   L+  +           V I  +     +L    +  Q L+   IR+ + 
Sbjct: 518 IGTYERFIATLLEQTKGVLPLWLAPKQVEIIPIS--ESNLEYANLIHQKLKKEFIRSHID 575

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           L   +    +++ A  +  P  ++ G  E     +  +                  +   
Sbjct: 576 LRDER-LSYKIRDAQTKKVPYQLVLGNKEVENNTITYR------------------QYGS 616

Query: 471 VAQITIPISELVSTVKKILQENK 493
             QITI I E V  +K+ +++ K
Sbjct: 617 EKQITISIQEFVDMLKQQIKDKK 639



 Score = 40.6 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 4/79 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          ++N I   +R     Y + P+ETP +   +   K     D   + +F  
Sbjct: 257 GLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIGTVELY-KTSGHWDHYGEDMFQP 315

Query: 74  QDDD---GQWISLRYDLTA 89
            +      +   LR     
Sbjct: 316 FNGGKGSDEQFILRPMNCP 334


>gi|326791444|ref|YP_004309265.1| glycyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326542208|gb|ADZ84067.1| glycyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 461

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/228 (7%), Positives = 54/228 (23%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +         K  +         + + +   +   + +             +       +
Sbjct: 236 EWFDYWRSYCKNFLLSLGVDENNMRLRDHSAEELSHYSNATTDIEFKFPFGWGELWGIAS 295

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              F +   ++      +       +  +      ++ A   ++         ++LE   
Sbjct: 296 RTDFDLKQHQEHSKQDMTYFDPTTNEKYLPYVIEPSLGADRVTLAFLCEAYDEETLEDGD 355

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV    +               +L       E     + + G + +  
Sbjct: 356 TRTIFRFHPALAPVKAAVLPLSKKLSEDAVKVFDIL-AKEFNVEFD--EAGSIGKRYRRQ 412

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  I           + ++D     +    I++   +   R+A
Sbjct: 413 DEIGTPFCITFDFDSLEDQKVTVRDRDSMAQERIAIEDLVEYIRERMA 460


>gi|238749482|ref|ZP_04610987.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238712137|gb|EEQ04350.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 642

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 102/356 (28%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G ++L   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDLWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           ++ G  E   G + ++        +R  K+  S        + + + +L++ ++  
Sbjct: 594 LVCGDKEVESGKIAVR--------TRRGKDLGSLD------VNVVVDQLLAEIRSR 635



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA D L     +
Sbjct: 425 EKRIGSDDLWTRAEDDLAAALTE 447


>gi|238765296|ref|ZP_04626223.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238696469|gb|EEP89259.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 642

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 102/356 (28%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G ++L   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDLWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           ++ G  E   G + ++        +R  K+  S        + + + +L++ ++  
Sbjct: 594 LVCGDKEVESGKIAVR--------TRRGKDLGSLD------VNVVVDQLLAEIRSR 635



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA D L     +
Sbjct: 425 EKRIGSDDLWTRAEDDLAAALTE 447


>gi|18311446|ref|NP_563380.1| glycyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|110798906|ref|YP_697152.1| glycyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110803756|ref|YP_699720.1| glycyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|168206859|ref|ZP_02632864.1| glycyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168211214|ref|ZP_02636839.1| glycyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|168215148|ref|ZP_02640773.1| glycyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168218224|ref|ZP_02643849.1| glycyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343166|ref|ZP_02864187.1| glycyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|182625996|ref|ZP_02953759.1| glycyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|59798596|sp|Q8XHL9|SYG_CLOPE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|18146130|dbj|BAB82170.1| glycine-tRNA ligase [Clostridium perfringens str. 13]
 gi|110673553|gb|ABG82540.1| glycyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110684257|gb|ABG87627.1| glycine--tRNA ligase [Clostridium perfringens SM101]
 gi|169298718|gb|EDS80794.1| glycyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|170661742|gb|EDT14425.1| glycyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170710778|gb|EDT22960.1| glycyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170713451|gb|EDT25633.1| glycyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177908703|gb|EDT71214.1| glycyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182379763|gb|EDT77242.1| glycyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 467

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 64/269 (23%), Gaps = 30/269 (11%)

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
             +L+ F   G  L       D+  +F     +  E I +         E+ +       
Sbjct: 224 QMELEFFCKPGTDLEWFNFWKDSCWNFLLNLGMKEENIRMRD-----HGEEELSFYSNAT 278

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
                            E +   G+         T     ++      +     P  NEK
Sbjct: 279 SDI--------------EYLFPFGWGELWGIADRTDYDLNKHAEHSGQDMTYLDPTTNEK 324

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
             P V     G  R                G +  +              +    + P  
Sbjct: 325 YVPYVIEPSLGADRVALAFLVEAYDEEELEGANGKVDVRT--------VMHLHPALAPFK 376

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
              +        K       L +           + + G + +  D    P  I      
Sbjct: 377 AAILPLSKKLSEKADEVYAEL-SKHFNV--DYDETGSIGKRYRRQDEIGTPFCITVDFDT 433

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWRE 468
              G + ++D    ++   +I++  +  E
Sbjct: 434 LEDGCVTVRDRDNMEQQRVKIEDVRAIIE 462


>gi|19113156|ref|NP_596364.1| cytoplasmic threonine-tRNA ligase Trs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|3183175|sp|P87144|SYTC_SCHPO RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2104451|emb|CAB08788.1| cytoplasmic threonine-tRNA ligase Trs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 703

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +L  +R  Y   G+  + TP + Y+ +L K     +  ++ +FS  D +
Sbjct: 313 FLPHGARIYNTLLKYMRYQYSKRGYQEVITPNM-YNVNLWKTSGHWNNYSENMFSF-DIE 370

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 371 KEKYALKPMNCPG 383



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/365 (10%), Positives = 87/365 (23%), Gaps = 25/365 (6%)

Query: 92  ARYVAENFDTIVFPCRTYRIGPVF----RNEKHGPGRFRQFIQCDVDNVGSSAETADAEM 147
            RY                   ++        +    F   I+ +   +          M
Sbjct: 328 MRYQYSKRGYQEVITPNMYNVNLWKTSGHWNNYSENMFSFDIEKEKYALKPMNCPGHCVM 387

Query: 148 CMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFG 207
                 +   +  +  D   G+ +R    G L  +      +           D      
Sbjct: 388 FKSRDRSYRDLPWRVAD--FGVLHRNEFSGALSGLTRVRRFQQ---------DDAHIFCT 436

Query: 208 LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK 267
              V+  + EG  D   +       T       +   +   EK + +L    K     + 
Sbjct: 437 PDQVRSEI-EGCFDFLKEVYGTFGFTFH-----LELSTRPEEKYLGDLATWDKAEAQLKA 490

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
               L         +  +         I              I     + E+ +      
Sbjct: 491 A---LDASGYKWELNAGDGAFYGPKIDITVFDALKRQHQCATIQLDFQLPERFQLEFHAP 547

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
                  +   +    + V      +G    ++A+ +   +      M P  +  +   +
Sbjct: 548 ASAEEAKESGNNNKYTRPVMVHRAILGSLERMIAILTEHYAGKWPFWMSPRQVCIIPVSA 607

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
            + +       +L  A I  +    S      +++ A         + G  E S   + +
Sbjct: 608 AAYNYADKVHNILSEADIFVDTD-KSDNTLPKKIRNAQLAQYNFIFVVGAEEESTNSVNV 666

Query: 448 KDLAK 452
           ++   
Sbjct: 667 RNRDD 671


>gi|16273277|ref|NP_439518.1| threonyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580800|ref|ZP_05848626.1| threonyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174548|sp|P43014|SYT_HAEIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|1574199|gb|AAC23014.1| threonyl-tRNA synthetase (thrS) [Haemophilus influenzae Rd KW20]
 gi|260092617|gb|EEW76554.1| threonyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 643

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 99/366 (27%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L   G+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
            +L++ 
Sbjct: 637 LKLLNE 642



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|332161611|ref|YP_004298188.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665841|gb|ADZ42485.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 642

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 102/356 (28%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G ++L   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDLWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           ++ G  E   G + ++        +R  K+  S        + + + +L++ ++  
Sbjct: 594 LVCGDKEVESGKIAVR--------TRRGKDLGSLD------VNVVVDQLLAEIRSR 635



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA D L     +
Sbjct: 425 EKRIGSDDLWTRAEDDLAAALTE 447


>gi|306836251|ref|ZP_07469233.1| threonine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567843|gb|EFM43426.1| threonine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 687

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 9/114 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    D +   +     LR  GIRA++     +    +++       P  +
Sbjct: 574 WLAPHQVMGIPVADDFVPHLEGVAAKLRRKGIRADVDTSDDR-MQKKIRNHTTGKVPFML 632

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELV 482
           + G  +   G +  + L  G +     +   ++   +W   R  +   P  EL+
Sbjct: 633 VDGARDAEAGAVSFRFL-DGTQVNGVPVDEAVELISTWVAERTNEQ--PTEELI 683



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            GF         +R  + +  RN +   G+  + TP +   D   +     D  + G+F
Sbjct: 285 SGFPVFHPNGATVRMEMENHSRNRHVQAGYSFVNTPHITKGDLF-RKSGHLDFYSDGMF 342


>gi|300781050|ref|ZP_07090904.1| threonine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532757|gb|EFK53818.1| threonine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 701

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 54/463 (11%), Positives = 120/463 (25%), Gaps = 62/463 (13%)

Query: 51  EYSDSLGKFLPDED-----RPNKGV--FSLQDDDGQWI-SLRYDLTAPLARYVAENFDTI 102
           E  +     L + +     R    +  FS  D+ G  +     D    + R   EN    
Sbjct: 263 EKLEEYQHMLEEAEKRDHRRLGAEMDLFSFPDEVGSGLPVFHPDG--GIVRMEMENHSRK 320

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE------MCMMMADTLE 156
                 Y         K    +    +    D +    +           +   +    +
Sbjct: 321 RHLEAGYSFVNTPHVTKGDLFQQSGHLDWYADGMFPPMQLDGEWDEDGNCVKQPVDYYAK 380

Query: 157 AVGIKRNDYHIGINNRKILDG---ILEKIGLHGDDKLNERLIVLRAI-----DKLDKFGL 208
            +    ++       R   +    + E   ++  +K      + RA      D       
Sbjct: 381 PMNCPFHNLIFDSRGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRARGFTQDDAHIYCTE 440

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAGE 266
             ++  L +   +      +   L     D  +   + D EK +   +++E     +   
Sbjct: 441 DQLEQELTD-VLEFIISLLQDYGLD----DFYLELSTKDPEKYIGDDDIWERSTNILESV 495

Query: 267 KGFNELVVISELV-RKSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQKPVV 324
              + L ++ +            ++    I R  +  T    +     F +         
Sbjct: 496 ATRSGLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPDRFNLEYTSSDGTK 555

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTM 383
              V                 +    F        V L+    +    +     V I   
Sbjct: 556 QRPVM----------------IHRALFGSIERFFGVLLEHYAGAFPAWLAPRQVVGIPVA 599

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
           D  +  L      T  LR  GIRA +     +    +++       P  ++ G  +    
Sbjct: 600 DEFAPHLDA---VTDKLRKRGIRASVDHSDDR-MQKKIRNHTTGKVPFMLLAGARDVEAD 655

Query: 444 MLQIKDLAKGKE-----LSREIKNNESWREARVAQI--TIPIS 479
            +  + L  G +     +   I+    W + +  +    + I 
Sbjct: 656 AVSFRFL-DGSQVNGVPVDEAIELISQWVDGQNNEQPNEVSIE 697


>gi|67459371|ref|YP_246995.1| threonyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|73919821|sp|Q4UKU3|SYT_RICFE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|67004904|gb|AAY61830.1| Threonyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 635

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 36/383 (9%), Positives = 93/383 (24%), Gaps = 12/383 (3%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           +F         +                ++  +     V        +    +       
Sbjct: 254 HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASGHWEKFR 313

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           + + A+        +   N      I ++      D                   L G+ 
Sbjct: 314 EDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +T E +        +  +    ++            G +E+
Sbjct: 373 MRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEIRAGSDEV 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVG 329
              +E   K          +     G  Y     +   +AI         Q   V     
Sbjct: 433 WDKAENALKEAVEKAGFTYTLNPGEGAFYGPKLEFVLTDAIGRQWQCGTLQMDFVLPERL 492

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
                     + +   +           + + ++              V I T+  D + 
Sbjct: 493 DASYIAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPIWLAPIQVAIATITSDLN- 551

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
                   + L   G+R ++ +   K    +++    +  P+  + G  E+    + I+ 
Sbjct: 552 -DYALEVQKALIDNGVRTDINISPDK-INYKIREFSNQKIPMIAVIGKQEKENKHVTIRR 609

Query: 450 LAKGKELSREIKNNESWREARVA 472
           L    +    I+   +  +    
Sbjct: 610 LGTTDQEVLSIEQLIALIKKENE 632



 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +     ++  + +F+L
Sbjct: 261 GMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK-SLWEASGHWEKFREDMFAL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 ET-DDKTLALKPMNCP 334


>gi|21229406|ref|NP_635328.1| threonyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|34395862|sp|Q8PRY4|SYT_METMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|20907999|gb|AAM33000.1| Threonyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 634

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 79/275 (28%), Gaps = 12/275 (4%)

Query: 207 GLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGE 266
           GL+ ++            D  +  N   EQ D+ +S L  ++   +++    ++ T    
Sbjct: 345 GLRRLRAFTMPDMHTLCEDMDQAVNQFKEQYDLCISVLE-NVGIHINDYEVAIRFTRDFY 403

Query: 267 KGFNELVVISELVRKSG----YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
           +   +LVV                 R                    A+    +  E  + 
Sbjct: 404 EANKDLVVNMAKTVNKPVLVEMWDTRFFYFVLKFEFNFVDALAKASALSTVQIDVENAER 463

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
                V   G+ +         +         +                   + P  +  
Sbjct: 464 YDISYVNADGKLERPTVLHCSPSGAIERCIYALLEKAAMETEEGKVPMLPVWLSPTQVRI 523

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +      ++  +   + L       +  L    + G +++ A R   P  ++ G  E   
Sbjct: 524 VPISEKHIAFAEEVAKKLDFRVDVDDRDL----SIGKKVREAGREWVPYVVVIGDKEMEE 579

Query: 443 GM--LQIKDLAKGKELSREIKNNESWREARVAQIT 475
               + I++   G++  ++++       AR+ + T
Sbjct: 580 STINVTIRE-ESGQDKPKKVQMTPEELNARIKEET 613



 Score = 37.1 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 70/184 (38%), Gaps = 25/184 (13%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD--SLGKFLPDEDRPNKGVFSLQD 75
              K   +++ + + + ++   +G   +ETPL+   +  +L K+L   DR     +S++ 
Sbjct: 238 YYPKGRLVKSLLENYVLDVATEFGAMEVETPLMYDMNHPTLKKYL---DRFPARQYSIE- 293

Query: 76  DDGQWISLRY-----------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
            D + + LR+           D+T        +N    +     Y      R E  G  R
Sbjct: 294 SDKRHMFLRFAACFGQFLMNHDMTISY-----KNLPLRMIEMTRYSFRKEQRGELVGLRR 348

Query: 125 FRQFIQCDVDNVGSSAETADAEM---CMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
            R F   D+  +    + A  +      +    LE VGI  NDY + I   +      + 
Sbjct: 349 LRAFTMPDMHTLCEDMDQAVNQFKEQYDLCISVLENVGIHINDYEVAIRFTRDFYEANKD 408

Query: 182 IGLH 185
           + ++
Sbjct: 409 LVVN 412


>gi|71898157|ref|ZP_00680343.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Ann-1]
 gi|71732131|gb|EAO34187.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Ann-1]
          Length = 564

 Score = 50.2 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R+     G   +  P ++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPTIQPRE-LWEESERWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D       
Sbjct: 90  GSQLLKIKDRKQAEYC 105


>gi|308186646|ref|YP_003930777.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057156|gb|ADO09328.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 642

 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 91/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +  N N I+       G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGTDEMWDRAEEDLAAALNENNIEFEFQPGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     +  P       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPKRLEATYVGENNDRQTPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P+ +  M+         +  T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPLQVVVMNITDGQAEYVESLTRKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++       +  +
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVDLFVEKLQQEI 632



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/197 (7%), Positives = 52/197 (26%), Gaps = 11/197 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHVFCTEEQVRDEVNSCI--------RMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKL 203
           + ++    +  RA + L
Sbjct: 425 EKRIGTDEMWDRAEEDL 441


>gi|166032677|ref|ZP_02235506.1| hypothetical protein DORFOR_02392 [Dorea formicigenerans ATCC
           27755]
 gi|166027034|gb|EDR45791.1| hypothetical protein DORFOR_02392 [Dorea formicigenerans ATCC
           27755]
          Length = 487

 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 32/102 (31%), Gaps = 3/102 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV I  +          +     L       E       N G + +  D    
Sbjct: 387 HFHPALAPVKIGILPLSKKLNEGAEKVYAQL-AKKYNCEFD--DRGNIGKRYRRQDEIGT 443

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           P  +         G + ++D    ++   +I++ +++ E + 
Sbjct: 444 PFCVTYDFDSEEDGAVTVRDRDTMEQERIKIEDLDAYFEKKF 485


>gi|12845562|dbj|BAB26799.1| unnamed protein product [Mus musculus]
          Length = 722

 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 35/116 (30%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 573 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 632

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   Q    A   A+  L        +++ A        ++ G  E++ G + I+
Sbjct: 633 AQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 688



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 344 FLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 402

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 403 -EQFALKPMNCPG 414


>gi|50954884|ref|YP_062172.1| prolyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81826655|sp|Q6AEX8|SYP_LEIXX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50951366|gb|AAT89067.1| prolyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 590

 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R + P G        +R++ +I   IR      G   +  P L   E  +  G++    
Sbjct: 34  IRRQAP-GVFAWLPLGLRVKAKIERIIREELAAAGAHEVHFPALLPREPYEITGRWEEYG 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D     +F L+D  G    L  
Sbjct: 93  DA----LFHLKDRKGADYLLAP 110



 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 33/123 (26%), Gaps = 19/123 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V +     +  +    +     L   G+          + G +  
Sbjct: 483 DDKGLVWPEAVAPFDVHVVAAGREQVAFDVAEQAVAQLEAVGLDVLYDDRPKVSPGVKFG 542

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
            A+    P  ++ G    ++G +++                  W        T+P+SE V
Sbjct: 543 DAELIGVPRVLVVG-RGAAQGEVEL------------------WDRRGGNHTTLPLSEAV 583

Query: 483 STV 485
           + +
Sbjct: 584 AAL 586


>gi|157825653|ref|YP_001493373.1| prolyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166980149|sp|A8GN90|SYP_RICAH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157799611|gb|ABV74865.1| prolyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 427

 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/162 (9%), Positives = 44/162 (27%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I + +       G   +  P ++ +    +     +  
Sbjct: 31  MIRQQAAGIYTWLPLGLKVLKNIENIVSLNMNKAGALEVLMPCIQPAHLWMES-GRFNNY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +   QD     +       D+   + R+  +++  +       +         R   
Sbjct: 90  GKEMLKFQDRHDNTLLFGPTNEDMITDIFRHNIKSYKDLPKNLYHIQWKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F        D    +A     +M     +T   +G+ 
Sbjct: 150 MRGREFLMKDAYSFDINEENAVKTYNQMYKAYINTFRDLGVF 191



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 1/102 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++      LI    HDS  +       + L    I        ++  G++    D 
Sbjct: 327 IWPFSVAPFKVSLINLNIHDSKCVELAAKAYKDLSDKNIEVLYDDTEAR-PGSKFATHDL 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P  II G  + +  ++++KD   G     E++N  ++ +
Sbjct: 386 IGSPHQIIIGPKKAANNIVELKDRKSGNIEDIEVENLINYIK 427


>gi|320335266|ref|YP_004171977.1| prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756555|gb|ADV68312.1| prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 504

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 19  PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--VFSLQDD 76
                R+  R+   +       G   +  P+L+ + +L       D       +FSL D 
Sbjct: 43  LPLMSRVEARLEALVHAEMRAVGAQEVRLPMLQPA-ALWAASGRWDAYRAEGLMFSLADR 101

Query: 77  DGQWISLRY 85
            G+ ++L  
Sbjct: 102 AGRALTLAP 110


>gi|88602971|ref|YP_503149.1| glycyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88188433|gb|ABD41430.1| glycyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 572

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 20/98 (20%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   + L+  GI AE     S   G + +  D    P A+           + ++D   
Sbjct: 486 AKEIARTLQMQGILAE--YDDSGAIGRRYRRQDEIGTPFAVTVDYDSLEDQTVTLRDRDS 543

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                             + Q+ IP  +LV  +  +++
Sbjct: 544 ------------------MQQVRIPKDQLVDLIPALIR 563


>gi|284031321|ref|YP_003381252.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283810614|gb|ADB32453.1| threonyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 417

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 1/76 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G          IR  +   +  +    G+  + +P+L   +   +        +  ++  
Sbjct: 23 GLPYLLPAGAAIRQALESYVAELERRSGYQHVYSPVLGKRELY-ELSGHWSHYSDDMYPP 81

Query: 74 QDDDGQWISLRYDLTA 89
               + + LR  L  
Sbjct: 82 MKVGEEEVVLRPSLCP 97



 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 3/80 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +             T+     G+RAE+        G +++  +R   P   
Sbjct: 307 WLAPVQLVVLPISDAEEKYAAEITRRAVDRGLRAELAHADEGTLGARIRE-NRL-VPYQA 364

Query: 434 IQGTGERSRGMLQIKDLAKG 453
           + G  E   G L ++D   G
Sbjct: 365 VIGARELEAGQLAVRD-RSG 383


>gi|62897167|dbj|BAD96524.1| threonyl-tRNA synthetase variant [Homo sapiens]
          Length = 723

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 574 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 633

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 634 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 693

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 694 KVHGERTISETIERLQQLKEFRSKQAE 720



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 345 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 404 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 449

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 450 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 509

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 510 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 557


>gi|38202255|ref|NP_689508.3| threonyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|60267755|sp|P26639|SYTC_HUMAN RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33875537|gb|AAH00517.2| Threonyl-tRNA synthetase [Homo sapiens]
 gi|119631209|gb|EAX10804.1| threonyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|158258124|dbj|BAF85035.1| unnamed protein product [Homo sapiens]
 gi|168277378|dbj|BAG10667.1| threonyl-tRNA synthetase [synthetic construct]
 gi|190690713|gb|ACE87131.1| threonyl-tRNA synthetase protein [synthetic construct]
          Length = 723

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 574 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 633

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 634 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 693

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 694 KVHGERTISETIERLQQLKEFRSKQAE 720



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 345 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 404 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 449

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 450 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 509

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 510 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 557


>gi|300812560|ref|ZP_07092977.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496433|gb|EFK31538.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 565

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++  +    I     N G   +  P +  + S+ +      +    +F L
Sbjct: 38  GVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPA-SMWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+ + L  
Sbjct: 97  KDRHGREMLLGP 108


>gi|123981026|gb|ABM82342.1| threonyl-tRNA synthetase [synthetic construct]
 gi|123995829|gb|ABM85516.1| threonyl-tRNA synthetase [synthetic construct]
          Length = 711

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 562 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 621

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 622 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 681

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 682 KVHGERTISETIERLQQLKEFRSKQAE 708



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 333 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 391

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 392 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 437

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 438 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 497

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 498 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 545


>gi|114600756|ref|XP_001153674.1| PREDICTED: threonyl-tRNA synthetase isoform 5 [Pan troglodytes]
          Length = 641

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 345 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 404 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 449

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 450 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 509

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 510 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 557


>gi|28199512|ref|NP_779826.1| prolyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182682245|ref|YP_001830405.1| prolyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|81839496|sp|Q87B25|SYP_XYLFT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701358|sp|B2I7W6|SYP_XYLF2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28057627|gb|AAO29475.1| prolyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632355|gb|ACB93131.1| prolyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578519|gb|ADN62488.1| prolyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 564

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R+     G   +  P ++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPTIQPRE-LWEESERWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D       
Sbjct: 90  GSQLLKIKDRKQAEYC 105


>gi|74152256|dbj|BAE32409.1| unnamed protein product [Mus musculus]
          Length = 511

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 63/226 (27%), Gaps = 21/226 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   I  P L  ++ L +     D   + +  L+D  
Sbjct: 126 LMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAE-LWRATSRWDLMGRELLRLRDRH 184

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 185 GKEYCLGPTHEEAVTALVA---SQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFY 241

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D+   +A+     +C       + +G++       + +         ++ +  
Sbjct: 242 MKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLRWMKARADVGSIGGTMSHEFQLPVDI 301

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
            +                      +  L  +   D  G  T+   +
Sbjct: 302 GEDRLVVCPSCHFSANT------EILDLSQKICPDCQGPLTETKGI 341



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 16/56 (28%), Gaps = 3/56 (5%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                        LR       +   +    GN+LK A++   P  II G      
Sbjct: 427 EKLYDDVMEAVPQLRGE---VLLDDRTHLTIGNRLKDANKLGYPFVIIAGKRALED 479


>gi|71274618|ref|ZP_00650906.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Dixon]
 gi|170730883|ref|YP_001776316.1| prolyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|226701359|sp|B0U4A7|SYP_XYLFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71164350|gb|EAO14064.1| Prolyl-tRNA synthetase, bacterial [Xylella fastidiosa Dixon]
 gi|167965676|gb|ACA12686.1| Proline--tRNA ligase [Xylella fastidiosa M12]
          Length = 564

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R+     G   +  P ++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPTIQPRE-LWEESERWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D       
Sbjct: 90  GSQLLKIKDRKQAEYC 105


>gi|33286920|gb|AAH55371.1| Threonyl-tRNA synthetase [Mus musculus]
          Length = 722

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 35/116 (30%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 573 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 632

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   Q    A   A+  L        +++ A        ++ G  E++ G + I+
Sbjct: 633 AQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 688



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 344 FLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 402

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 403 -EQFALKPMNCPG 414


>gi|26326983|dbj|BAC27235.1| unnamed protein product [Mus musculus]
          Length = 722

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 35/116 (30%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 573 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 632

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   Q    A   A+  L        +++ A        ++ G  E++ G + I+
Sbjct: 633 AQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 688



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 344 FLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 402

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 403 -EQFALKPMNCPG 414


>gi|256070953|ref|XP_002571806.1| threonyl-tRNA synthetase [Schistosoma mansoni]
 gi|238656954|emb|CAZ28036.1| threonyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 563

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/147 (9%), Positives = 39/147 (26%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            +        + V      +G    I+A+ +          + P  +  +   S      
Sbjct: 415 INHQTDLNTHRPVIIHRAILGSVERIIAILTESYGGKWPFWLSPRQVLVVPVVSACDEYA 474

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 L  AG    +     +    +++          ++ G  E + G + ++     
Sbjct: 475 IDVKNRLHDAGFMVSVDTDPGRTLNKKIRNGQLLQNNFILVVGEKEIANGTVNVRTRDNK 534

Query: 454 KELSREIKNNESWREARVAQITIPISE 480
                 +++         A  T+   +
Sbjct: 535 VHGEHPVEHVIERFRQLAASRTLEAEQ 561


>gi|114600738|ref|XP_517835.2| PREDICTED: threonyl-tRNA synthetase isoform 10 [Pan troglodytes]
 gi|114600740|ref|XP_001153787.1| PREDICTED: threonyl-tRNA synthetase isoform 6 [Pan troglodytes]
 gi|114600742|ref|XP_001153971.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 9 [Pan
           troglodytes]
          Length = 723

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 574 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 633

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 634 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 693

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 694 KVHGERTISETIERLQQLKEFRSKQAE 720



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 345 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 404 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 449

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 450 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 509

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 510 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 557


>gi|52632425|gb|AAH10578.2| Threonyl-tRNA synthetase [Homo sapiens]
          Length = 723

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 574 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 633

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 634 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 693

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 694 KVHGERTISETIERLQQLKEFRSKQAE 720



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 345 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 404 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 449

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 450 TGLIRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 509

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 510 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 557


>gi|73919762|sp|Q8CFI5|SYPM_MOUSE RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags:
           Precursor
 gi|24416455|gb|AAH38817.1| Prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus]
          Length = 475

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 63/226 (27%), Gaps = 21/226 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   I  P L  ++ L +     D   + +  L+D  
Sbjct: 90  LMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAE-LWRATSRWDLMGRELLRLRDRH 148

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 149 GKEYCLGPTHEEAVTALVA---SQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFY 205

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D+   +A+     +C       + +G++       + +         ++ +  
Sbjct: 206 MKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLRWMKARADVGSIGGTMSHEFQLPVDI 265

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
            +                      +  L  +   D  G  T+   +
Sbjct: 266 GEDRLVVCPSCHFSANT------EILDLSQKICPDCQGPLTETKGI 305



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 16/56 (28%), Gaps = 3/56 (5%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                        LR       +   +    GN+LK A++   P  II G      
Sbjct: 391 EKLYDDVMEAVPQLRGE---VLLDDRTHLTIGNRLKDANKLGYPFVIIAGKRALED 443


>gi|325678778|ref|ZP_08158376.1| glycine--tRNA ligase [Ruminococcus albus 8]
 gi|324109282|gb|EGC03500.1| glycine--tRNA ligase [Ruminococcus albus 8]
          Length = 461

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/231 (4%), Positives = 49/231 (21%), Gaps = 11/231 (4%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +         K  +       E + + +   +     ++       +    +        
Sbjct: 233 EWFDYWRTFCKNFLLSLNIKEENLRLRDHSAEELCFYSKATTDFEYLFPFGWGELWGVAD 292

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +                   +  +      ++      + +       + + +  
Sbjct: 293 RTDYDLTQHINTSGKRLDYLDPETNEKYIPYVIEPSLGVERLFLTVVTEAYDEEDIGTPE 352

Query: 370 NNIKEMGPVLI--------TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                                +          Q     L             + + G + 
Sbjct: 353 KPDVRTVMHFHPALAPFKACVLPLSKKLAEPAQKLFDTL-AKHFSV--DYDEAGSIGKRY 409

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  D    P+ +         G + ++D    ++   +I++   +   ++ 
Sbjct: 410 RRQDEIGTPICVTYDFDSVEDGCVTVRDRDTMEQERIKIEDLVGYIAKKIE 460


>gi|271500480|ref|YP_003333505.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270344035|gb|ACZ76800.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 642

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 92/348 (26%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y +   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFTTSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +++   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDMWDRAEEDLAAALTENAIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQAVVMNITDSQSDYVSELTRKLQDAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  E  R   + Q+ 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSMDVSEVITKLQEEIRSRSLHQLE 641



 Score = 39.8 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 14/203 (6%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA + L     +
Sbjct: 425 EKRIGSDDMWDRAEEDLAAALTE 447


>gi|254411303|ref|ZP_05025080.1| threonyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196181804|gb|EDX76791.1| threonyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 609

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 1/82 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    + L+  +   Q +R  G+R E+     +     ++  ++   P+  
Sbjct: 503 WLAPVQARLLPVSDEQLTFAKEVAQKMRLVGVRVEVDTSGDR-LPKMIRNGEKAKIPVMA 561

Query: 434 IQGTGERSRGMLQIKDLAKGKE 455
           + G  E     L ++    GK+
Sbjct: 562 VVGAKEVESNSLSVRIREAGKQ 583



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   +R+ + D ++      G+ P+ TP +   +   K      +  + +F
Sbjct: 224 GLPLWTPKGTILRSTLEDFLKQEQIKRGYQPVVTPHIGRVELF-KTSGHWQKYKEDLF 280


>gi|148698861|gb|EDL30808.1| prolyl-tRNA synthetase (mitochondrial)(putative), isoform CRA_a
           [Mus musculus]
 gi|148698862|gb|EDL30809.1| prolyl-tRNA synthetase (mitochondrial)(putative), isoform CRA_a
           [Mus musculus]
          Length = 475

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 63/226 (27%), Gaps = 21/226 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   I  P L  ++ L +     D   + +  L+D  
Sbjct: 90  LMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAE-LWRATSRWDLMGRELLRLRDRH 148

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 149 GKEYCLGPTHEEAVTALVA---SQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFY 205

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D+   +A+     +C       + +G++       + +         ++ +  
Sbjct: 206 MKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLQWMKARADVGSIGGTMSHEFQLPVDI 265

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
            +                      +  L  +   D  G  T+   +
Sbjct: 266 GEDRLVVCPSCHFSANT------EILDLSQKICPDCQGPLTETKGI 305



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 16/56 (28%), Gaps = 3/56 (5%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                        LR       +   +    GN+LK A++   P  II G      
Sbjct: 391 EKLYDDVMEAVPQLRGE---VLLDDRTHLTIGNRLKDANKLGYPFVIIAGKRALED 443


>gi|108799209|ref|YP_639406.1| threonyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119868325|ref|YP_938277.1| threonyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126434867|ref|YP_001070558.1| threonyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|122977050|sp|Q1B9T4|SYT_MYCSS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225465|sp|A3PYU0|SYT_MYCSJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225466|sp|A1UF79|SYT_MYCSK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|108769628|gb|ABG08350.1| Ser-tRNA(Thr) hydrolase [Mycobacterium sp. MCS]
 gi|119694414|gb|ABL91487.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Mycobacterium
           sp. KMS]
 gi|126234667|gb|ABN98067.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Mycobacterium
           sp. JLS]
          Length = 684

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 42/116 (36%), Gaps = 9/116 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +      +   +     LR+ G+R E+     +     + + ++R  P  +
Sbjct: 569 WLAPVQVVGIPVADAHIPYLEDVAAQLRSRGVRVEIDGSDDRMAKKIVNHTNQR-VPFML 627

Query: 434 IQGTGERSRGMLQIKDLAKGKEL-----SREIKNNESWREARVAQITIPISELVST 484
           + G  + + G +  +      ++        ++    W   R    T P ++LV  
Sbjct: 628 LAGDKDVAAGAVSFR-FGDRTQINGVPRDEAVEAIVGWIVERRN--TAPTADLVKA 680


>gi|14970558|emb|CAC44360.1| ProS protein [Erwinia chrysanthemi]
          Length = 224

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +   Q LR  G+   +     +  G  
Sbjct: 113 DDRGIIWPDAIAPFQVAILPMNMHKSFRVQEVAEGIYQQLRANGVDVLLDDRKER-PGVM 171

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P  I+ G        ++ K   KG++   +  +   +  ++ A
Sbjct: 172 FADMELIGIPHTIVIGDRNLDNDEIEYKHRRKGEKEMIKAGDIVEFLLSQCA 223


>gi|158312212|ref|YP_001504720.1| prolyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158107617|gb|ABW09814.1| prolyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 471

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/227 (11%), Positives = 68/227 (29%), Gaps = 16/227 (7%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  E +         +   +   R          E ++G     +       G     
Sbjct: 180 LEVYREFMTSVLALPVFVGAKTRKERFAGAINTMTCEGMMGDGKALQMATSHELGQNFAR 239

Query: 332 GRYDGLVSRFKGQNVP-ATGFSIGISRLIVALKSLE----SSTNNIKEMGPVLITTMDHD 386
                 +    G+++   T +      +   + +           +     V++  +  D
Sbjct: 240 AFDIDFLGPDGGRHLAWTTSWGSSTRMIGGLIMAHGDDNGLRVPPVLAPTQVVVLPVRDD 299

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              ++K +  T  L   G+RA +      +FG ++  A+ +  P+ +  G  + + G + 
Sbjct: 300 DAVVTKAREITDALTALGVRARLDARPGLSFGRRVTDAELKGIPVRVEVGPRDLAAGNVT 359

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           +      ++    +               +P+  L+  V+  L    
Sbjct: 360 LARRDTAEKFPVPLGEAAG---------RVPV--LLDEVQASLYAQA 395


>gi|325685949|gb|EGD28012.1| proline--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 565

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++  +    I     N G   +  P +  + S+ +      +    +F L
Sbjct: 38  GVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPA-SMWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+ + L  
Sbjct: 97  KDRHGREMLLGP 108


>gi|261867949|ref|YP_003255871.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413281|gb|ACX82652.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 643

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/356 (11%), Positives = 92/356 (25%), Gaps = 8/356 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +                D +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTSSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCMPDQVESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E         N +        G  
Sbjct: 402 KMVYDIYSTFGFENIKVKLSTRPEKRIGSDEMWDKAEADLAKALEHNSLSYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   +              V     + VP       +G    
Sbjct: 462 YGPKLEF-ALTDSLDREWQCGTIQLDFFLPERLNASYVGEDNERKVPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P  +  M+         Q   + L  AG+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQVVVMNITDSQSEYVQKVAKQLSDAGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +++    R  P  ++ G  E   G + ++     K         E + +    Q+
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIEAGKVAVR---TRKGQDLGTFTVEEFLDILKKQV 632



 Score = 41.0 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 10/152 (6%), Positives = 36/152 (23%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 314 GDLMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +       ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCMPDQVESEVTSCIKMV 404


>gi|323339428|ref|ZP_08079710.1| proline--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093139|gb|EFZ35729.1| proline--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 572

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 46/125 (36%), Gaps = 20/125 (16%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              +I      +I       + +   +  T++L  AG +  +     +  G +   +D  
Sbjct: 464 WPRSIAPFDVHVIPVNVKKEEQVELSEKVTELLENAGYKVLVDDRKER-PGVKFADSDLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P  I  G    + G+++IK    G+                   + + + EL+++++ 
Sbjct: 523 GIPARITVGKK-AAEGIVEIKLRRTGE------------------TLEVKLDELLNSLQI 563

Query: 488 ILQEN 492
           +L+E 
Sbjct: 564 LLKEE 568



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 71/248 (28%), Gaps = 6/248 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+   I   IR   EN     +  P    ++ L +     +     
Sbjct: 34  QITAGMYAYLPLAYRVLRNIEAIIREEMENIDAAEMLVPAALPAE-LWQQTGRYETYGPN 92

Query: 70  VFSLQDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +F  QD   +   L    + T   + R   + +  +       +      N         
Sbjct: 93  LFKFQDRHERDFILGPTHEETFTTIVRDAVKTYKKLPITLYQIQTKYRDENRPRFGLLRG 152

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGILEKIGLH 185
           +           + E +  +    M      V  +   ++   I +   + G   K  + 
Sbjct: 153 REFIMKDAYSFHAEEESLDKTFRDMDSAYTNVFNRVGLNFRSIIGDAGAMGGNNSKEFMA 212

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
                 + ++     D      +   K  + +   +  G+  K A   ++ ID +  FL 
Sbjct: 213 IAPIGEDTVVYSDESDYAANLEMAQNKRTMPKSH-ETLGELQKVATPGAKTIDEVAEFLG 271

Query: 246 IDLEKSMH 253
              ++ + 
Sbjct: 272 SSADREIK 279


>gi|104774217|ref|YP_619197.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|122983932|sp|Q1G9P3|SYP_LACDA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|103423298|emb|CAI98139.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 565

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++  +    I     N G   +  P +  + S+ +      +    +F L
Sbjct: 38  GVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPA-SMWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+ + L  
Sbjct: 97  KDRHGREMLLGP 108


>gi|27229277|ref|NP_149065.2| threonyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|59896669|sp|Q9D0R2|SYTC_MOUSE RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|26373003|dbj|BAB27429.2| unnamed protein product [Mus musculus]
 gi|74177703|dbj|BAE38950.1| unnamed protein product [Mus musculus]
 gi|74195699|dbj|BAE39654.1| unnamed protein product [Mus musculus]
 gi|74223282|dbj|BAE40773.1| unnamed protein product [Mus musculus]
 gi|74225376|dbj|BAE31616.1| unnamed protein product [Mus musculus]
 gi|148671337|gb|EDL03284.1| threonyl-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 722

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 35/116 (30%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 573 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 632

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   Q    A   A+  L        +++ A        ++ G  E++ G + I+
Sbjct: 633 AQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 688



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 344 FLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 402

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 403 -EQFALKPMNCPG 414


>gi|319779147|ref|YP_004130060.1| Prolyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109171|gb|ADU91917.1| Prolyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 582

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/79 (8%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         ++  ++   +R      G   +  P+++ ++   K     +  
Sbjct: 31  MIRKLGAGIYTYMPLGFKVLKKVEAIVREEMNRAGAIELLMPIVQPAELWMK-TERWNAY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   +D   +   ++ 
Sbjct: 90  GPELLRFKDRHSRDFIIQP 108


>gi|148671336|gb|EDL03283.1| threonyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 544

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 35/116 (30%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 395 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 454

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   Q    A   A+  L        +++ A        ++ G  E++ G + I+
Sbjct: 455 AQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 510



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 166 FLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 224

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 225 -EQFALKPMNCPG 236


>gi|153004735|ref|YP_001379060.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152028308|gb|ABS26076.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 681

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 67/228 (29%), Gaps = 4/228 (1%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  +   + +  E   I+    ++     +          +  E    +  +  +   
Sbjct: 425 DDAHLYLMESQIPEEVSRIVELMKTVYGAFGLEFSLLFSTRPVKPEDRIGDDALWDKAEG 484

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                 +RI +   +  G   + G   + ++   +  + Q   +        R+D     
Sbjct: 485 ALRAALDRIGLPWQLNPGDGAFYGPKIDFVVTDSLGRKWQTCTIQLDYAAPERFDLTYVG 544

Query: 341 FKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
                           G     +A+ +   +      + PV    +          +   
Sbjct: 545 DDNHEHRPVVIHRAVYGSFERFIAILTEHYAGAFPAWLAPVQARVVTVSDRFEGWAREVQ 604

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
             L TAG R E+   S K  G +++ A     P A++ G  E     +
Sbjct: 605 AKLATAGWRVELDESSDK-LGAKIRNAQLAKIPFALVIGEKEVEAQGV 651



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 10/86 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A        + N + D++R +    G+  ++TPLL ++  L +         + +F +
Sbjct: 295 GAAFWLPNGTTLYNVLEDAMRRLVSKGGYQEVKTPLL-FNKRLWEQSGHWGVYRENMFLV 353

Query: 74  QDDDGQ---------WISLRYDLTAP 90
            D +            +SL+      
Sbjct: 354 FDKESDPALPVDERLSMSLKPMNCPS 379


>gi|116514305|ref|YP_813211.1| prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|122274963|sp|Q049U9|SYP_LACDB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116093620|gb|ABJ58773.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|325126002|gb|ADY85332.1| Prolyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 565

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++  +    I     N G   +  P +  + S+ +      +    +F L
Sbjct: 38  GVYSYLPLGYKVLRKTEKIIEEEMANAGVVEMIMPHMLPA-SMWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+ + L  
Sbjct: 97  KDRHGREMLLGP 108


>gi|85057943|ref|YP_456859.1| threonyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123738887|sp|Q2NIG3|SYT_AYWBP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84790048|gb|ABC65780.1| threonyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 641

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/365 (10%), Positives = 108/365 (29%), Gaps = 7/365 (1%)

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           R        +            +        +    ++    + ++  +  +        
Sbjct: 277 RYIVDKELSYDYHHVYTPIMANTELYRISGHLDHYASNMFPIMSLENGEKLVLRPMNCPH 336

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
             ++ K   H   +L  R+  L  + + +K G       + E   +++  F +   +  E
Sbjct: 337 HMMIYKKNPHSYKELPLRIAELGMMHRFEKSGAVSGLQRVREMTLNDAHIFARPDQIKEE 396

Query: 236 QIDIMVSFLSIDLEKSMHELYELVK--GTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
              I+   L +  + ++      +        EK FN+  +     +        + +  
Sbjct: 397 IKKIINLILEVYCDFNIKNYELRLSYRNPNNTEKYFNDDQMWYNAEKTLKETIKELGLPF 456

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---G 350
               G   + G   +  +   + NE+    V        ++D        ++        
Sbjct: 457 KEAIGEAAFYGPKLDVQVFNALGNEETLSTVQLDFLLPQKFDLTFIGEDNKHHRPVVIHR 516

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS-DSLSKYQMYTQMLRTAGIRAEM 409
             +      +A    E+       + PV +  +   +       Q   + L+    R E+
Sbjct: 517 AVVSTMERFLAHLVEETKGVFPLWLAPVQVLLIPVSAPLHFEFSQKIKETLQLQNFRVEI 576

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               +   G +++ A +   P  ++ G  E    ++  +      + + ++    S  + 
Sbjct: 577 NSKDN-TLGYKIREAQKLKIPYQVVIGDHEMINNLITFRKYGSHLQTTIKVDEFVSLLKD 635

Query: 470 RVAQI 474
           +V Q 
Sbjct: 636 KVLQK 640



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 36/106 (33%), Gaps = 9/106 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  +   I +   +Y +  + TP++  ++   +     D     +F +
Sbjct: 260 GLPFWLPKGATVRRIVERYIVDKELSYDYHHVYTPIMANTELY-RISGHLDHYASNMFPI 318

Query: 74  QD-DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              ++G+ + LR             +         +Y+  P+   E
Sbjct: 319 MSLENGEKLVLRPMNCP-------HHMMIYKKNPHSYKELPLRIAE 357


>gi|167042805|gb|ABZ07523.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine microorganism HF4000_ANIW137I15]
          Length = 627

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 33/80 (41%), Gaps = 1/80 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +     +    +     L+ +G+R ++    ++  G +++       P  +
Sbjct: 525 WLSPVQVKVLPITERNHDHARRVAASLKESGLRVDVD-DRNEKLGYKIRQGRLERTPYLL 583

Query: 434 IQGTGERSRGMLQIKDLAKG 453
           + G  E+    + ++D  +G
Sbjct: 584 VIGDREQESQQVAVRDRTEG 603



 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 3/110 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G          +R  I     + +   G++ +  P L +S    +     D   + +F+
Sbjct: 246 SGLVYWLPHGAVLRKVIERFWEDEHVRRGYELVVIPHLVHSRLF-RTSGHYDFYKENMFT 304

Query: 73  LQDDDGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
           L+ D  ++++ +       +  Y  E       P R   +G V+RNE+ G
Sbjct: 305 LEVDGEEYVA-KPMNCPGHILIYQNERRSYRDLPIRYAEMGTVYRNERSG 353


>gi|190348228|gb|EDK40650.2| hypothetical protein PGUG_04748 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 379

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 16/170 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL---- 73
                 RI N+++  +++    YGF+ + TPL+ Y + L K     D     +F +    
Sbjct: 50  FLPHGTRIMNKLIQFMKHQQMRYGFEEVITPLI-YKNQLWKTSGHWDNYRDDMFKVTGNV 108

Query: 74  ----QDDDGQWISLRYDLTAP-------LARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
               +D       L+               R   E    +      +R            
Sbjct: 109 VHEHEDPQLHEYGLKPMNCPGHCVIFSKFERSYNEFPIRLSDFSSLHRNEASGALSGLTR 168

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            R        +       E   +    ++ ++ +  GI  N+    ++ R
Sbjct: 169 VRRFHQDDGHIFCEFDQVEDEISNTVNLILESYKVFGIPSNEIKFTLSTR 218


>gi|311747849|ref|ZP_07721634.1| proline--tRNA ligase [Algoriphagus sp. PR1]
 gi|126575841|gb|EAZ80151.1| proline--tRNA ligase [Algoriphagus sp. PR1]
          Length = 493

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 63/256 (24%), Gaps = 26/256 (10%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        ++   E    + V +                S   R          EA+
Sbjct: 170 WQEGHTAHATAKEAEAETLQMMNVYATFAEDFMALPVVRGRKSANERFAGADDTLCIEAM 229

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G            ++    +          +RL+ AL        
Sbjct: 230 MQDGKALQAGTSHFLGQNFAKAFDVKFAAKDGKLDYVWGTSWGVSTRLMGALIMAHSDDN 289

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    +       K       LR  GI  +     +   G + 
Sbjct: 290 GLVLPPKLAPIQVVIVPIYRKEEEFDAISEKANEIMAELRKVGISVKYDNRDTHKPGWKF 349

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIPIS 479
              + +  PL I  G  +   G ++I  +D     +     +                IS
Sbjct: 350 AEYELKGVPLRIAIGPRDLENGTIEIARRDNLTKSQFELSSQPIAE-----------KIS 398

Query: 480 ELVSTVKKILQENKEE 495
            ++  +++ + +   +
Sbjct: 399 GMLEEIQEAIYKKAFD 414


>gi|94676542|ref|YP_588910.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123081480|sp|Q1LT04|SYT_BAUCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94219692|gb|ABF13851.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 642

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 86/316 (27%), Gaps = 7/316 (2%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +               A+ +     +  +Y I   N      I  +      D       
Sbjct: 298 MIDRTLWEQTGHWSNYAEHIFTTSSENREYCIKPMNCPGHVQIFNQQINSYRDLPLRMAE 357

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F     +  E  + +     +       ++
Sbjct: 358 FGSCYRNEPSGSLHGL-MRVRNFTQDDAHIFCTEEQVCDEINNNIKMLYEVYHTFGFKKI 416

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +    A   G +++   +E    +   +N I     +  G  Y     +  +  F  
Sbjct: 417 LVNLSTRPAHRIGNDKIWDKAEQDLATTLTNNGILFKYNVGAGAFYGPKIEFTLLDSFDR 476

Query: 316 MNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
             +           S       +    R     +           + + ++         
Sbjct: 477 AWQCGTIQLDFSLPSRLKAFYINKNNQRLVPVMIHRAILGSLERFIGILIEEYAGFFPTW 536

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  +  M+   +  +      Q L TA IRA++ L  ++  G +++    R  P  
Sbjct: 537 LAPTQ--VVLMNISDNQSNYVIQLMQKLSTANIRAKIDL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIK 448
           +I G  E   G + I+
Sbjct: 594 LICGDQEIKMGKVTIR 609



 Score = 37.5 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 45/156 (28%), Gaps = 9/156 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   +   IR+  + Y +  +++P++    +L +         + +F+ 
Sbjct: 262 GMVFWHVDGWIIFRELETFIRSKLQTYKYQEVKSPVMIDR-TLWEQTGHWSNYAEHIFT- 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRFRQ----- 127
              + +   ++        +   +  ++    P R    G  +RNE  G           
Sbjct: 320 TSSENREYCIKPMNCPGHVQIFNQQINSYRDLPLRMAEFGSCYRNEPSGSLHGLMRVRNF 379

Query: 128 -FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
                 +                M+ +     G K+
Sbjct: 380 TQDDAHIFCTEEQVCDEINNNIKMLYEVYHTFGFKK 415


>gi|139948914|ref|NP_001077356.1| probable prolyl-tRNA synthetase, mitochondrial isoform 2 [Mus
           musculus]
 gi|159575933|emb|CAP19280.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus]
          Length = 511

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 63/226 (27%), Gaps = 21/226 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   I  P L  ++ L +     D   + +  L+D  
Sbjct: 126 LMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAE-LWRATSRWDLMGRELLRLRDRH 184

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 185 GKEYCLGPTHEEAVTALVA---SQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFY 241

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D+   +A+     +C       + +G++       + +         ++ +  
Sbjct: 242 MKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLQWMKARADVGSIGGTMSHEFQLPVDI 301

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
            +                      +  L  +   D  G  T+   +
Sbjct: 302 GEDRLVVCPSCHFSANT------EILDLSQKICPDCQGPLTETKGI 341



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 16/56 (28%), Gaps = 3/56 (5%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                        LR       +   +    GN+LK A++   P  II G      
Sbjct: 427 EKLYDDIMEAVPQLRGE---VLLDDRTHLTIGNRLKDANKLGYPFVIIAGKRALED 479


>gi|88800311|ref|ZP_01115877.1| threonyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88776888|gb|EAR08097.1| threonyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 643

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/383 (12%), Positives = 99/383 (25%), Gaps = 16/383 (4%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           I    R ++H  G         VD           +    M  T    
Sbjct: 265 FWHPNGWTMYQVIEQYMRRKQHQHGYQEIKTPMVVDRSLWEKSGHWDKFGDDMFTTHSES 324

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 325 RDNAIKPMNCPCHVQVFNQGLKSY-RDLPLRLAEFGSCHRNEASGALHGIMRVRG----F 379

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     + SE    +     +  +    +    +        G +E    +E 
Sbjct: 380 VQDDAHIFCTEGQIQSEVASFIGMLEEVYHDFGFDDYILKLSTRPEQRVGSDEDWDRAE- 438

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
                   N       I+ G   + G   E  L   +    Q   +       GR D   
Sbjct: 439 -EALSEALNATGKEWAILPGEGAFYGPKIEFTLKDSLGRLWQCGTIQVDFSMPGRLDAQY 497

Query: 339 SRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
               G+                R +  L    +       + PV    ++         Q
Sbjct: 498 VDEHGERQTPVMLHRAIVGSFERFLGILIEQYAGAMP-PWLAPVQAMVLNITDAQAETAQ 556

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + L   G RA+  L  ++  G +++    +  P  ++ G  E   G + ++     +
Sbjct: 557 NIVKNLENQGFRAKADL-RNEKIGFKIREHTIQRIPYLLVVGDKEVENGTVAVR---TRE 612

Query: 455 ELSREIKNNESWREARVAQITIP 477
                +     + +   + I + 
Sbjct: 613 GQDLGVMTLAEFSDRIQSDIALK 635



 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G          +   I   +R     +G+  I+TP++       K     D+    +F+
Sbjct: 262 GMVFWHPNGWTMYQVIEQYMRRKQHQHGYQEIKTPMVVDRSLWEKS-GHWDKFGDDMFT 319


>gi|300858607|ref|YP_003783590.1| threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686061|gb|ADK28983.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302206319|gb|ADL10661.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|302330876|gb|ADL21070.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308276561|gb|ADO26460.1| Threonyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 689

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 12/125 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +     + I   D   D L +       LR  GIRA++     +    +++   
Sbjct: 569 GAFPAWLAPHQVIGIPVADAFVDHLEEMMA---QLRQRGIRADVDTSDDR-MQKKIRNHT 624

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISE 480
               P  ++ G  +   G +  + L  G +     + + ++  + W  +R      P  E
Sbjct: 625 TGKVPFMVLAGARDVEAGAVSFRFL-DGTQVNGVPVEKAVEIIDQWIRSRNNDQ--PTEE 681

Query: 481 LVSTV 485
            VS +
Sbjct: 682 SVSAL 686



 Score = 38.3 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            GF         +R  + +  R  +   G+  + TP +   D   K     D    G+F
Sbjct: 285 SGFPVFHPNGGVVRLEMEEHSRRRHIAAGYSFVNTPHITKGDLFKKS-GHLDFYADGMF 342


>gi|258620049|ref|ZP_05715089.1| prolyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258587782|gb|EEW12491.1| prolyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 459

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  +I G    
Sbjct: 369 MNMHKSERVQEAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTVIIGDRSM 427

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+   G++ +  +++   + +A++A
Sbjct: 428 DEGHFEYKNRRNGEKEAVAMESIIDFIQAKLA 459


>gi|126739185|ref|ZP_01754879.1| prolyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719802|gb|EBA16510.1| prolyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 451

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   + +     G  P+  P L+ +D L K     D  
Sbjct: 31  MIKQSSAGIYSWLPLGFKVLKKIETIVHDEQMRAGHIPMLMPTLQSAD-LWKESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            + +  + D  G+ +       +L   + R    ++  +       +  
Sbjct: 90  GEEMLRINDRHGRDMLYGPTNEELITDIFRGHVSSYKDLPLTLYHIQWK 138


>gi|319760426|ref|YP_004124364.1| prolyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039140|gb|ADV33690.1| prolyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 595

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  ++  G        +R+  ++ + +R+   N  F  I  P+++ ++ L K        
Sbjct: 31  MIRQISTGLYTWLPIGLRVLRKVENIVRDEMNNISFIEISMPIIQPAN-LWKQSGRWSEY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +   ++   Q   L  
Sbjct: 90  GPELLRFKNRVNQEFVLGP 108


>gi|291277001|ref|YP_003516773.1| threonyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964195|emb|CBG40041.1| threonyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 603

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           PV +  +          Q   + +   G  AE+ +  ++    +++ A++++ P+ ++ G
Sbjct: 505 PVQVVLIPITESQHQYAQSLRKKIIALGAYAEV-MNKNETLNKKIRNAEKQHVPMILVIG 563

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             E++ G L I+D  +  +   + +      E ++ +++
Sbjct: 564 QKEQNSGTLAIRDRREKSQYEMKEEEFLHMVEQKMKEVS 602



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R RI + +        ++P+  P L    S+ K     D   + ++  
Sbjct: 229 GLPIWLPNGARLRRRIEELLTKALMIRDYEPVRGPEL-LKSSVWKTSGHFDNYGENMY-F 286

Query: 74  QDDDGQWISLRYDLTAP 90
              D     L+      
Sbjct: 287 TTIDEVEYGLKPMNCVG 303


>gi|56789234|gb|AAH88355.1| TARS protein [Homo sapiens]
          Length = 682

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 345 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 404 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 449

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 450 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 509

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 510 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 557



 Score = 38.7 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 29/106 (27%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 574 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 633

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            Q   Q    A   A++ L        +++ A        ++ G  
Sbjct: 634 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEK 679


>gi|20071917|gb|AAH27073.1| Pars2 protein [Mus musculus]
          Length = 397

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 63/226 (27%), Gaps = 21/226 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   I  P L  ++ L +     D   + +  L+D  
Sbjct: 12  LMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAE-LWRATSRWDLMGRELLRLRDRH 70

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 71  GKEYCLGPTHEEAVTALVA---SQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFY 127

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D+   +A+     +C       + +G++       + +         ++ +  
Sbjct: 128 MKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLQWMKARADVGSIGGTMSHEFQLPVDI 187

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
            +                      +  L  +   D  G  T+   +
Sbjct: 188 GEDRLVVCPSCHFSANT------EILDLSQKICPDCQGPLTETKGI 227



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 16/56 (28%), Gaps = 3/56 (5%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                        LR       +   +    GN+LK A++   P  II G      
Sbjct: 313 EKLYDDIMEAVPQLRGE---VLLDDRTHLTIGNRLKDANKLGYPFVIIAGKRALED 365


>gi|302527884|ref|ZP_07280226.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302436779|gb|EFL08595.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 678

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 42/116 (36%), Gaps = 9/116 (7%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           PV    +   +D +   +   + LR  GIR E+     +    +++    +  P  ++ G
Sbjct: 567 PVQTVAIPITADQVEYLRGVEKALRAKGIRVEVDASDDR-MQKKIRTHTTQKVPFLLLAG 625

Query: 437 TGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELVSTVKK 487
             +   G +  +    G +     + + ++    W   R      P +E V  + K
Sbjct: 626 AKDAEAGAVSFR-FRDGGQINGVPVDQAVEAIAEWVARRENAS--PSAEAVEKILK 678



 Score = 37.9 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 23/95 (24%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL------------ 60
            G      K   IR  + +  R  +E  G++ + TP +   D                  
Sbjct: 286 SGLPVFHPKGGIIRRELENYSRRRHEEAGYEFVNTPHISKGDLFHTSGHLPYYADTMFPP 345

Query: 61  ---PDEDRPNKGV--------FSLQDDDGQWISLR 84
               +ED   K +        F  +    + + LR
Sbjct: 346 VQFEEEDYYLKAMNCPMHNLIFRSRGRSYRELPLR 380


>gi|13435498|gb|AAH04621.1| Tars protein [Mus musculus]
          Length = 457

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 35/116 (30%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 308 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 367

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   Q    A   A+  L        +++ A        ++ G  E++ G + I+
Sbjct: 368 AQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 423



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 79  FLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 137

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 138 -EQFALKPMNCPG 149


>gi|139948347|ref|NP_758476.2| probable prolyl-tRNA synthetase, mitochondrial isoform 1 [Mus
           musculus]
 gi|123239922|emb|CAM27480.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Mus musculus]
          Length = 475

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 63/226 (27%), Gaps = 21/226 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   I  P L  ++ L +     D   + +  L+D  
Sbjct: 90  LMPYTVRAVEKLVRVIDQEMQAIGGQKINMPSLSPAE-LWRATSRWDLMGRELLRLRDRH 148

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 149 GKEYCLGPTHEEAVTALVA---SQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFY 205

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D+   +A+     +C       + +G++       + +         ++ +  
Sbjct: 206 MKDMYTFDSSSEAAQETYGLVCDAYCRLFDRLGLQWMKARADVGSIGGTMSHEFQLPVDI 265

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
            +                      +  L  +   D  G  T+   +
Sbjct: 266 GEDRLVVCPSCHFSANT------EILDLSQKICPDCQGPLTETKGI 305



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 16/56 (28%), Gaps = 3/56 (5%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                        LR       +   +    GN+LK A++   P  II G      
Sbjct: 391 EKLYDDIMEAVPQLRGE---VLLDDRTHLTIGNRLKDANKLGYPFVIIAGKRALED 443


>gi|42560810|ref|NP_975261.1| threonine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|42492306|emb|CAE76903.1| threonine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321098|gb|ADK69741.1| threonine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 639

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 46/143 (32%), Gaps = 21/143 (14%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  +   L+  +           V I  +     +L    +  Q L+   IR+ + 
Sbjct: 518 IGTYERFIATLLEQTKGVLPLWLVPKQVEIIPIS--ESNLEYANLIHQKLKKEFIRSHID 575

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           L   +    +++ A  +  P  ++ G  E     +  +                  +   
Sbjct: 576 LRDER-LSYKIRDAQTKKVPYQLVLGNKEVENNTITYR------------------QYGS 616

Query: 471 VAQITIPISELVSTVKKILQENK 493
             QITI I E V  +K+ +++ K
Sbjct: 617 EKQITISIQEFVDMLKQQIKDKK 639



 Score = 40.6 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 4/79 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          ++N I   +R     Y + P+ETP +   +   K     D   + +F  
Sbjct: 257 GLPLWLPNGFIVKNEIEKYLRQKEWEYDYIPVETPPIGTVELY-KTSGHWDHYGEDMFQP 315

Query: 74  QDDD---GQWISLRYDLTA 89
            +      +   LR     
Sbjct: 316 FNGGKGSDEQFILRPMNCP 334


>gi|308182413|ref|YP_003926540.1| prolyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064598|gb|ADO06490.1| prolyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 577

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 8/131 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + LR  
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKN 462
           G+ A +    ++ FG +++  +     LA+I G         + IK     K+  ++I+ 
Sbjct: 508 GVDALLDDRDAR-FGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTIKDIEL 566

Query: 463 NESWREARVAQ 473
            E   E   ++
Sbjct: 567 EEKILEMLESE 577



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|260589680|ref|ZP_05855593.1| glycine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|331083112|ref|ZP_08332229.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260539920|gb|EEX20489.1| glycine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|330405114|gb|EGG84651.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 464

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/240 (7%), Positives = 65/240 (27%), Gaps = 11/240 (4%)

Query: 240 MVSFLSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +  F   D + +      +     +      +E +   +  ++     ++       +  
Sbjct: 226 LEFFCKPDTDLEWFAYWKQFCLDWLHSLGLKDEEIRYRDHDKEELSFYSKATTDVEFLFP 285

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           + +   +       +          +      ++ A    +     
Sbjct: 286 FGWGELWGIADRTDYDLTQHQNVSGQDMTYFDDETNQKYIPYVIEPSLGADRMVLAFLCS 345

Query: 359 IVALKSLESSTNN-------IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
               + L++  N+          + PV I  +              + L +     E   
Sbjct: 346 AYDEEVLDAEKNDVRTVLRFHPALAPVKIGVLPLSKKLNEGALKVFEQL-SKKYNCEFD- 403

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
               N G + +  D    P  +       + G + ++D    ++   +I++ +++ E + 
Sbjct: 404 -DRGNIGKRYRRQDEIGTPFCVTYDFDSETDGAVTVRDRDTMEQERVKIEDLKAYFEEKF 462


>gi|190570494|ref|YP_001974852.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019252|ref|ZP_03335059.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190356766|emb|CAQ54125.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995361|gb|EEB56002.1| prolyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 419

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/163 (12%), Positives = 45/163 (27%), Gaps = 11/163 (6%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L  +   G        + +   I + IR+     G   +  P ++ + SL +     D  
Sbjct: 31  LIKQTASGIYSWLPLGLLVLKNIENIIRDEI---GAIEVLMPCVQPA-SLWRESGRYDDY 86

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
            K +  ++D     +       ++   L R   +++  +       +         R   
Sbjct: 87  GKEMLRIKDRHESDMLFGPTHEEVVTDLIRNTVKSYKDLPLCLYQIQWKFRDEVRPRYGV 146

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
                F        D     A  +   M        + +G+  
Sbjct: 147 MRGREFLMKDAYSFDVDYEGALNSYNLMYKTYIKIFKRMGLTP 189



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +      + + P  +  ++  +          + L++  +   ++  + ++ G +    D
Sbjct: 318 DKGIIWPEAVAPFKVGLINLQTKVTEAADKIYKALKSDEV---LYDDTDESVGVKFARMD 374

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
               P  II G    S  ++++K+ A G+    +++ 
Sbjct: 375 LIGLPWQIIIGKKAVSENIVEVKNRATGEVEEIQVEE 411


>gi|304316662|ref|YP_003851807.1| glycyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778164|gb|ADL68723.1| glycyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 462

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/241 (8%), Positives = 65/241 (26%), Gaps = 8/241 (3%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           EQ+++       +  +  +   E     +       E +   +  ++   + +       
Sbjct: 222 EQMELEFFCKPGEDIEWFNYWKEFCMNWLLNLGLKKENLRFRDHSKEELSHYSNATTDIE 281

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
                 +           F +    +   V  +       +  +      +V A   ++ 
Sbjct: 282 YRFPFGWGELWGIADRTDFDLKRHMEHSGVDLTYFDPITNEKYIPYCIEPSVGADRVALA 341

Query: 355 ISRLIVALKSLESSTNN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   + +E +           + P+    +                LR   +   +
Sbjct: 342 FLIDAYNEEEVEENDTRVVLKLHPMIAPIKAAVLPLSKKLGDNAYKLYDDLRKEFV---V 398

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               + + G + +  D    P  I       +   + I+D    +++  +I   + + E+
Sbjct: 399 DYDETGSIGKRYRRQDEIGTPYCITYDFDSLNDESVTIRDRDTMQQVRLKINEVKPYLES 458

Query: 470 R 470
           +
Sbjct: 459 K 459


>gi|110669558|ref|YP_659369.1| glycyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109627305|emb|CAJ53795.1| glycine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 602

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 6/105 (5%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           + +    + + +     LR AG+        S + G + +  D    P  I         
Sbjct: 490 ISNVEQLVEQAKDIVSELRAAGLSV--VADDSGSIGRRYRRQDEIGTPFCITVDRDGIEG 547

Query: 443 ---GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                + I+    G+++   I       ++  +   I    L   
Sbjct: 548 TDPDTVTIRQRDTGRQVRAPIAVVTELIQSVQSD-EIIFDNLTDA 591


>gi|332265242|ref|XP_003281637.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           2 [Nomascus leucogenys]
          Length = 713

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/148 (10%), Positives = 40/148 (27%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 564 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPHQVMVIPVGPACEKY 623

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               +      G  A++ L  +     +++ A        ++ G  E+    + ++    
Sbjct: 624 ALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKVNNAVNVRTRDN 683

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  + +     +      T+   E
Sbjct: 684 KIHGEILVTSAIDKLKNLKKTRTLNAEE 711



 Score = 42.5 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 335 FLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 393

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 394 D-TFALKPMNCPGHCLMFAHR 413


>gi|148284343|ref|YP_001248433.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166225471|sp|A5CD12|SYT_ORITB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146739782|emb|CAM79649.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 648

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 82/274 (29%), Gaps = 32/274 (11%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +T E I        +  +    E+            G +   +  +  +
Sbjct: 397 DDAHIFCTEDQITDETIKFCHLLKQVYQDFGFPEVKIKFSDRPEKRAGTD--KIWDKAEQ 454

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
              +    +    TI RG   + G   E IL   +  E Q   +        R +     
Sbjct: 455 ALIHAIQTLGEEYTINRGEGAFYGPKLEFILTDAIGREWQCGTLQVDFVLPERLNASYIS 514

Query: 341 FKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
            +G                 R I  L    S    I  + P+ +  +    ++++  +  
Sbjct: 515 SEGSKKRPVILHRAILGSFERFIGILIEHYSGRLPIW-LAPIQVAVVSITDEAVNYAKQL 573

Query: 397 TQMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
            Q L    IR+ + + + K      N          PL  I G  E   G + I+ L   
Sbjct: 574 HQELIDNNIRSTLDISNQKINYKIRNFFTA----KVPLIAILGKKESESGKIAIRTLGSQ 629

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKK 487
           ++                    I  SEL++ ++K
Sbjct: 630 EQ------------------QVISSSELIAHIRK 645



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   I + I    +  G+  + TP++  S  L +     ++  + +F+L
Sbjct: 262 GMPFWHDKGWTIFKIIKNYISCQIQRAGYIEVNTPMV-LSQKLWEKSGHWEKFRENMFTL 320


>gi|145230123|ref|XP_001389370.1| threonyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134055485|emb|CAK44000.1| unnamed protein product [Aspergillus niger]
          Length = 718

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R+ Y   G+  ++TP +   D  + K           +F 
Sbjct: 317 GCPFLLPNGTKIFNALQSLLRSEYRKRGYQEVQTPNM--YDVGIWKTSGHWAHYKDDMFK 374

Query: 73  LQDDDGQWISLRYDLTAP 90
           L D + +  +L+      
Sbjct: 375 L-DVEKREWALKPMNCPG 391



 Score = 43.3 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 42/128 (32%), Gaps = 18/128 (14%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 I     +++  M   +D + + Q     LR   +  ++ L  +     +++   
Sbjct: 604 GKWPFWISPRQILIVPVMPAVNDYVEELQTI---LRGDKLNVDIDLSGN-TMQKKIRTGQ 659

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
            +      + G  E+    + I++                    +   + IP+ E+   +
Sbjct: 660 LQQYNFIFVVGASEKESRTVNIRNRDD--------------PATQKQGVMIPLDEVREKL 705

Query: 486 KKILQENK 493
           + + +E +
Sbjct: 706 RSLRKERR 713


>gi|114600748|ref|XP_001153418.1| PREDICTED: threonyl-tRNA synthetase isoform 2 [Pan troglodytes]
 gi|114600750|ref|XP_001153486.1| PREDICTED: threonyl-tRNA synthetase isoform 3 [Pan troglodytes]
 gi|114600752|ref|XP_001153550.1| PREDICTED: threonyl-tRNA synthetase isoform 4 [Pan troglodytes]
          Length = 664

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 515 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 574

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 575 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 634

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 635 KVHGERTISETIERLQQLKEFRSKQAE 661



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 286 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 344

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 345 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 390

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 391 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 450

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 451 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 498


>gi|315930573|gb|EFV09608.1| Proline-tRNA ligase [Campylobacter jejuni subsp. jejuni 305]
          Length = 220

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 34  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 88

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 89  FGKELLRFKDRKENEFVLGP 108


>gi|189055088|dbj|BAG38072.1| unnamed protein product [Homo sapiens]
          Length = 711

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 333 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 391

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 392 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 437

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 438 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRAVYSVFGFSFKLNLSTRPEKFLGDI 497

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 498 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 545



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 562 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 621

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 622 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFTLVVGEKEKISGTVNIRTRDN 681

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 682 KVHGERTISETIERLQQLKEFRSKQAE 708


>gi|163840211|ref|YP_001624616.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162953687|gb|ABY23202.1| threonyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 453

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          IR  +           G+  + +P+L   +   +      + ++ +F  
Sbjct: 72  GLPLWLPDGAVIRTELEKLAVEESLRSGYQRVYSPVLAKRELYERS-GRWAKFSEDMFPP 130

Query: 74  QDDDGQWISLRY 85
                + + LR 
Sbjct: 131 LRIGNEELVLRP 142



 Score = 41.0 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 53/157 (33%), Gaps = 23/157 (14%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D   +            ++  +  ++  K           + PV +  +       ++  
Sbjct: 313 DDGAAHRPMMVHRGLFGAMERTVALLIEKHQGKMP---PWLAPVQLAVLPVSDTQAARCA 369

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             +     AGIR  +      + G++++   +R      + G+ E   G L +       
Sbjct: 370 EISAQALAAGIRVIVDHDG--SVGSRVRKTSQRRVSWLAVVGSQESESGKLSL------- 420

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
                     S   AR AQ+ +P++E +  +++ +Q 
Sbjct: 421 ----------SIPGARPAQL-LPVTEAIELMRQKIQR 446


>gi|145592022|ref|YP_001154024.1| glycyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283790|gb|ABP51372.1| glycyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 585

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 51/189 (26%), Gaps = 5/189 (2%)

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
             +RI      ++  E Y    +        + E         +    R   L       
Sbjct: 379 YGDRIGEVIKAIKENEAYVAKTFGEGKQEVTVGEYIVTRDMVFIKTEKRKTDLEKFIPHV 438

Query: 345 NVPATGFSIGISRLIV-ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
             P+ G    +  ++  A+                 I            Y    + LR  
Sbjct: 439 VEPSFGLDRIMYAVLEYAVAEEGGRVYLRLPADVAPINVCILPIVKRQDYVEIGRSLRKE 498

Query: 404 GIRAEMF---LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
            +  E F          G++    D    PLA+       + G + I+D    K++   +
Sbjct: 499 -LATEGFLAWYDDEGTIGSRYAACDEIGVPLAVTIDERTPTDGTVTIRDRDTRKQVRIGL 557

Query: 461 KNNESWREA 469
           ++   +  A
Sbjct: 558 RDVAKFLAA 566



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 5/51 (9%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFD----PIETPLLEYSDSLGKFL 60
          GF D     +++R  I++  R  +    F      +ETP++          
Sbjct: 29 GFYDYGPLGVQLRRNIVEKWRRTFVLP-FQDLIIEVETPIIMPEPVFKASG 78


>gi|114600744|ref|XP_001153847.1| PREDICTED: threonyl-tRNA synthetase isoform 7 [Pan troglodytes]
          Length = 715

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 4/123 (3%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   Q    A   A++ L     
Sbjct: 590 ERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCT 649

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK---GKEL-SREIKNNESWREARVA 472
              +++ A        ++ G  E+  G + I+       G+   S  I+  +  +E R  
Sbjct: 650 LNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQLKEFRSK 709

Query: 473 QIT 475
           Q  
Sbjct: 710 QAE 712



 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 345 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 404 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 449

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 450 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 509

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 510 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 557


>gi|307131177|ref|YP_003883193.1| threonyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528706|gb|ADM98636.1| threonyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 642

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/348 (13%), Positives = 92/348 (26%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +++   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDMWDRAEEDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQAVVMNITDTQSDYVSELTRKLQDAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  E  R   + Q+ 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSLDVSEVITKLQEEIRSRSLHQLE 641



 Score = 41.0 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/203 (6%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA + L     +
Sbjct: 425 EKRIGSDDMWDRAEEDLAAALTE 447


>gi|254440347|ref|ZP_05053841.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Octadecabacter antarcticus 307]
 gi|198255793|gb|EDY80107.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Octadecabacter antarcticus 307]
          Length = 367

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 96/317 (30%), Gaps = 46/317 (14%)

Query: 49  LLEYSDSLGKFLPDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCR 107
           +L+ + +L     ++ R     F+ QD   G+ + LR D T P+   V ++  +   P R
Sbjct: 32  ILQPAGTLLDLYGEDIRARA--FTTQDPLRGEQM-LRPDFTVPI---VQQHMASASEPAR 85

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD----------TLEA 157
              +G VFR ++    R  +F+Q   +        A                        
Sbjct: 86  YTYLGKVFRKQETDETRPTEFVQVGFEVFDGKDVAAADAEVFATFAGILADVPVTPMTGD 145

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI-------------------VLR 198
           +GI R         ++    ++  +      +                         +  
Sbjct: 146 IGILRAAVIGLNTTQRRRAALMRHLWRPRRFRALLDRFGGITPTPAARTALLANADAMAD 205

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
               L       + L +   R D S D   G  L  + +D ++  +      ++  L ++
Sbjct: 206 LPAVLGLRSESEIALRIDALRVDASADPISGFEL--DLLDALLK-VRETAPNALATLRDI 262

Query: 259 VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
                +     + + +  + +   G + + +   +   R          E   GF     
Sbjct: 263 AVDLPSIGAAIDGMSMRLDALESRGIDVDALPFEAAYGR-------TSMEYYDGFVFGFS 315

Query: 319 KQKPVVFGSVGGGGRYD 335
               +    V  GGRYD
Sbjct: 316 SNTNLNIPPVATGGRYD 332


>gi|218248302|ref|YP_002373673.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226699137|sp|B7K1H5|SYP_CYAP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|218168780|gb|ACK67517.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 598

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 4/76 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ ++ L +     +   K    
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQLQPAE-LWRESGRWETYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY 85
           +FSL D     + L  
Sbjct: 96  MFSLIDRRDTELGLGP 111



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 20/124 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++    +D+  +   +     L   G+   +     +  G + K A+ 
Sbjct: 494 IWPVAIAPYHAVVVIPNINDAQQVEVAEKLYTELNKVGVETLLDDRDERA-GVKFKDAEL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I+ G           + L  GK         E    +      I I ++V T+K
Sbjct: 553 IGIPYRIVTG-----------RSLQSGK--------VELVERSTKNSQEIAIDQVVETLK 593

Query: 487 KILQ 490
           K++ 
Sbjct: 594 KLIN 597


>gi|114600754|ref|XP_001153291.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic isoform 1 [Pan
           troglodytes]
          Length = 619

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 470 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 529

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 530 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 589

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 590 KVHGERTISETIERLQQLKEFRSKQAE 616



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 241 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 299

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 300 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 345

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 346 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 405

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 406 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 453


>gi|310821380|ref|YP_003953738.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309394452|gb|ADO71911.1| Threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 642

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/286 (11%), Positives = 74/286 (25%), Gaps = 19/286 (6%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +  +  G           +L+ + ++ R        GL  V+    +       + 
Sbjct: 340 MNCPSHHLYFGFKRHSYRDLPLRLHTQDVLHRNEAAGSLGGLTRVRQFAQDDAHIYCTED 399

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
             G     +++   V  L         +             G + L   +E   +    +
Sbjct: 400 QIG-----DEVRRFVKLLDHVYNAVGLKYSAKFSTRPEQRLGEDALWDRAESALEGVLKT 454

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG-SVGGGGRYDGLVSRFKGQN 345
             +        G  Y     ++       +  K +            R+D          
Sbjct: 455 LGVPYEVKPGEGAFYGPKIDFDV---SDSIGRKWQLGTIQLDYLAAQRFDLKYIGEDNAE 511

Query: 346 VPAT----GFSIGISRLIVALKSL--ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                          R I  L      +    +  +  VL+T  D     L   +     
Sbjct: 512 HRPVVLHRAIYGSFERFIAILIEHFAGAFPAWLAPIQAVLVTVADRQ---LDYARKVRDQ 568

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           LR  G R E+     ++   +++    +  P  ++ G  E   G +
Sbjct: 569 LRAKGFRVELD-DRGQSLNAKIREWQIQKLPFTLVIGDNEVEAGGV 613



 Score = 41.4 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   +   +   +R +    G+  I+TPL+ ++  L +      +  + +F +
Sbjct: 267 GSAFWSPKGTTLYQTLSQWMRRLTAETGYVEIKTPLM-FNKGLWEASGHWGKYKENMFLV 325

Query: 74  QDD--DGQWISLRYDLTAP 90
            D+       SL+      
Sbjct: 326 LDNESGEHDFSLKPMNCPS 344


>gi|194384006|dbj|BAG59361.1| unnamed protein product [Homo sapiens]
          Length = 602

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 453 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 512

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 513 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 572

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 573 KVHGERTISETIERLQQLKEFRSKQAE 599



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 224 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 282

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 283 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 328

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 329 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 388

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 389 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 436


>gi|194207413|ref|XP_001492689.2| PREDICTED: prolyl-tRNA synthetase 2, mitochondrial (putative)
           [Equus caballus]
          Length = 472

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I       G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 87  LLPYTVRALEKLVRVIDQEMRAIGGQKVSMPSLSPAE-LWRATNRWDLMGKELLRLRDRH 145

Query: 78  GQWISLRY 85
           G+   L  
Sbjct: 146 GKEYCLGP 153


>gi|119631208|gb|EAX10803.1| threonyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
          Length = 619

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 470 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 529

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 530 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDN 589

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 590 KVHGERTISETIERLQQLKEFRSKQAE 616



 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 241 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 299

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 300 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 345

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 346 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 405

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 406 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 453


>gi|119719206|ref|YP_919701.1| glycyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524326|gb|ABL77698.1| glycyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 497

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 35/108 (32%), Gaps = 14/108 (12%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +  +        K +     L+    R   +     + G +   AD    P +I    
Sbjct: 404 CAVFPLVKRDGLDVKAREIYNQLKKH-FRC--YYDEDGSIGRRYAKADEIGVPFSITIDG 460

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                  + I+     +++   ++N ++            +SEL++T+
Sbjct: 461 QTLRDDTVTIRFRDTKEQIRERVENLKAR-----------LSELIATL 497


>gi|311246798|ref|XP_003122346.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Sus scrofa]
          Length = 801

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 33/115 (28%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K   V      +G    ++A+ S          + P  +  +         
Sbjct: 652 TYVSKEGDDKKNPVIIHRAILGSVERMIAILSENYEGKWPFWLSPRQVIVIPVGPACEKY 711

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
               +      G  A++ L  S     +++ A        ++ G  E++   + +
Sbjct: 712 ALQVSNEFLEEGFMADVDLDHSCTLNKKIQNAQLAQYNFILVVGEKEKANNAVSV 766



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + YS  L +         + +F+  D D
Sbjct: 423 FLPRGAFIYNALMDFIREEYHQRSFTEVLSPNM-YSSKLWEASGHWQHYRENMFTF-DVD 480

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 481 KDTFALKPMNCPGHCLMFAHR 501


>gi|291287861|ref|YP_003504677.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885021|gb|ADD68721.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 637

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  ++     L   +   Q L+  G R +  L  ++  G +++ A     P  +I G  
Sbjct: 537 QVRVINITDGQLDYCKALVQKLKAEGFRVDSDL-RNEKVGFKIREAQMEKIPHMLIIGQN 595

Query: 439 ERSRGMLQIKDLAKGK 454
           E  + ++ ++ L  G+
Sbjct: 596 EVDKELVSVR-LRNGE 610


>gi|224099691|ref|XP_002311580.1| predicted protein [Populus trichocarpa]
 gi|222851400|gb|EEE88947.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 28/102 (27%), Gaps = 3/102 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+  +            ++  +     S S        +  AG  
Sbjct: 553 HRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS--EKSQSYALQVRDQIHEAGYY 610

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++   + +    +++ A        ++ G  E   G + ++
Sbjct: 611 VDVD-ATDRKIQKKVREAQLAQYNYILVVGEEESKTGQVSVR 651



 Score = 40.2 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+ N+++  I++ Y   G++ +++P +     L +         + +F L+ ++
Sbjct: 308 FLPHGTRVYNKLMQFIKDEYRKRGYEEVKSPNIFNMK-LWETSGHAANYKENMFLLEIEN 366

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 367 -QEFGLKPMNCPG 378


>gi|257060371|ref|YP_003138259.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256590537|gb|ACV01424.1| prolyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 598

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 4/76 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G      P L+ ++ L +     +   K    
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVREEMNAAGAQECLLPQLQPAE-LWRESGRWETYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY 85
           +FSL D     + L  
Sbjct: 96  MFSLIDRRDTELGLGP 111



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 20/124 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V++    +D+  +   +     L   G+   +     +  G + K A+ 
Sbjct: 494 IWPVAIAPYHAVVVIPNINDAQQVEVAEKLYTELNKVGVETLLDDRDERA-GVKFKDAEL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I+ G           + L  GK         E    +      I I ++V T+K
Sbjct: 553 IGIPYRIVTG-----------RSLQSGK--------VELVERSTKNSQEIAIDQVVETLK 593

Query: 487 KILQ 490
           K++ 
Sbjct: 594 KLIN 597


>gi|50552312|ref|XP_503566.1| YALI0E05027p [Yarrowia lipolytica]
 gi|49649435|emb|CAG79147.1| YALI0E05027p [Yarrowia lipolytica]
          Length = 517

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/402 (11%), Positives = 111/402 (27%), Gaps = 39/402 (9%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                +  +    D  G       +            + IK+           +   +LE
Sbjct: 30  QQIVTKGEMLDYYDVSGCYIMRPPSYFVWEQIQEWFNIKIKKLGVKNAYFPMFVSSRVLE 89

Query: 181 KIGLHGDDKLNERLIVLRA--IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           K   H +    E   V +A   D  +   ++     +            +   L   Q +
Sbjct: 90  KEKDHVEGFAPEVAWVTKAGSSDLEEPVAIRPTSETVMYPYYAKWVRSHRDLPLKLNQWN 149

Query: 239 IMVSFLSIDLEKSMHE----LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
            +V +     +  +        E     +  ++  +E++ I +   K       + +   
Sbjct: 150 SVVRWEFKHPQPFLRTREFLWQEGHTAHLTAKEAEDEVMAILDNYEKIYSELLAVPVIKG 209

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR------------FK 342
                E + G ++   +   + +  +      S   G  +  +               F 
Sbjct: 210 KKSEKEKFAGALFTTTVEGFIPSTGRGIQGATSHCLGQNFSKMFDISVEDPNGGADKLFA 269

Query: 343 GQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS--------LSKYQ 394
            QN       +     +    +              +I      +          +    
Sbjct: 270 WQNSWGLSTRVIGVMTMTHSDNKGLVLPPRVAHTQAIIIPCGLTAKLAAEKRAAVMDASA 329

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKG 453
              + L  A +R       + + G +   A+ R  PL I  G  +  +G  + ++    G
Sbjct: 330 AIEKALSEADVRVASDTRDTYSPGWKFSDAELRGIPLRIEVGPRDVEQGKIVAVR-RDNG 388

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
           +++  +I +  +            + EL+ T++K L    +E
Sbjct: 389 EKIVMDIADLAT-----------SVPELLETIQKDLFSKAKE 419


>gi|301760003|ref|XP_002915815.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281353585|gb|EFB29169.1| hypothetical protein PANDA_003827 [Ailuropoda melanoleuca]
          Length = 475

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   ++   I    +  G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 90  LLPYTVRAMEKLERVIDQEMQAIGGQKVNMPSLSPAE-LWRATNRWDLMGKELLRLRDRH 148

Query: 78  GQWISLRY 85
           G+   L  
Sbjct: 149 GKEYCLGP 156


>gi|242309942|ref|ZP_04809097.1| threonyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523239|gb|EEQ63105.1| threonyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 605

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 40/95 (42%), Gaps = 1/95 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             +       S  +     L   G+  E+    ++    +++ A+++  P+ +I G  E+
Sbjct: 511 IIIPIGESQESYAKELRNALLNVGVYTEID-NKNETLNKRIRNAEKQRVPMILILGAKEQ 569

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
              ++ I+D  + ++ +        + + ++ +++
Sbjct: 570 EERIIAIRDRREKQQFTMGFDEFIKFSKEKMREVS 604



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 28/97 (28%), Gaps = 2/97 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R  I + +       G++P+  P +    ++ K         + ++  
Sbjct: 231 GLPIWLPKGSRLRRNIENLLTKALIQRGYEPVRGPEI-LKSAVWKTSGHYANYGENMY-F 288

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              DG    ++        +       +       + 
Sbjct: 289 TTIDGVEYGIKPMNCVGHIKVYQSALRSYRELPLRFY 325


>gi|197097988|ref|NP_001125825.1| threonyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|55729334|emb|CAH91401.1| hypothetical protein [Pongo abelii]
          Length = 563

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 185 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 243

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 244 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 289

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 290 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 349

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 350 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 397



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 414 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 473

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A      L ++ G  E+  G + I+    
Sbjct: 474 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNLILVVGEKEKISGTVNIRTRDN 533

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E+R  Q  
Sbjct: 534 KVHGERTISETIERLQQLKESRSKQAE 560


>gi|330973197|gb|EGH73263.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 173

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 4/114 (3%)

Query: 47  TPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-ARYVAENFDTIVFP 105
            P L   D+  +     +     +++ +D  G+   L  + TA    R  +E        
Sbjct: 1   MPALWGQDTFIEKAGGSEIIG-QMWAFEDKAGRACCLIPEATALFQER--SEALLEGRRD 57

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
              + +   +R E+   GR+R+F Q  ++ +  S + A      +    L+++G
Sbjct: 58  AMFFYVARCYRYERPQAGRYREFTQLGLEILSPSPQQALLRSQAICTGFLDSLG 111


>gi|260582696|ref|ZP_05850484.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094262|gb|EEW78162.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 643

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 98/366 (26%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L   G+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
             L++ 
Sbjct: 637 LTLLNE 642



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|291614198|ref|YP_003524355.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584310|gb|ADE11968.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 637

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +   I   +R +Y + G+  I  P +     L +     +  
Sbjct: 255 MQDEAP-GMVFWHPKGWAMWQVIEQYMRAVYRDNGYHEIRCPQIIDR-VLWEKSGHWEHY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYV-AENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
              +F+  + +    +++        +   A+       P R    G   RNE  G   
Sbjct: 313 KANMFT-TESEKHDYAIKPMNCPGHVQVFNADLRSYRELPLRYGEFGSCHRNEPSGGLH 370



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/373 (9%), Positives = 95/373 (25%), Gaps = 16/373 (4%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +          +        +         +       +                     
Sbjct: 254 HMQDEAPGMVFWHPKGWAMWQVIEQYMRAVYRDNGYHEIRCPQIIDRVLWEKSGHWEHYK 313

Query: 158 VGIKRNDYHIGINNRKILDG-----ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
             +   +        K ++      +         +                  GL G+ 
Sbjct: 314 ANMFTTESEKHDYAIKPMNCPGHVQVFNADLRSYRELPLRYGEFGSCHRNEPSGGLHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D+   F     + SE        L +  +   H++   +     G  G +E+
Sbjct: 373 MRVRGFVQDDGHIFCTEEQIESEVKAFNTLVLKVYKDFGFHDVVVKLALRPEGRVGSDEI 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVG 329
              SE   ++   ++ +        G  Y     +          +              
Sbjct: 433 WDKSENALRAALRASGMDWEELPGEGAFYGPKIEFHIKDAIGRSWQCGTIQVDFSMPGRL 492

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
           G    D   +R     +           + + +++   +      + PV +  M+     
Sbjct: 493 GAEFVDEDNTRKVPVMLHRAILGSLERFIGILVENHAGALPLW--LAPVQMVVMNISQAQ 550

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
                   Q LR +G R +  L  ++    +++    +  P  +I G  E + G++ ++ 
Sbjct: 551 EEYAGKVAQTLRASGFRVQSDL-RNEKITYKIREHSLQKLPYQLIIGDKEVAAGLVAVRS 609

Query: 450 LAKGK---ELSRE 459
              G+   ++S +
Sbjct: 610 -RTGEDLGQMSVD 621


>gi|238917275|ref|YP_002930792.1| glycyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750]
 gi|259511934|sp|C4Z1I4|SYG_EUBE2 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|238872635|gb|ACR72345.1| glycyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750]
          Length = 462

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/229 (9%), Positives = 54/229 (23%), Gaps = 15/229 (6%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             +   +  + +       +  +            G                       Y
Sbjct: 242 WRQYCIDWLKALGIKEDEMRARDHSPEEL-CFYSKGTTDIEFLFPFGWGELWGIADRTDY 300

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +      V  E        S       +  +      ++ A   ++         + LE 
Sbjct: 301 DLTQHQTVSGEDM------SYFDDEAKEKYIPYVIEPSLGADRVTLAFLCSAYDEEELEG 354

Query: 368 ST-----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                  +    + PV I  +          +     L +     E       N G + +
Sbjct: 355 GDVRTVLHFHPAIAPVKIGILPLSKKLNEGAEKVYAEL-SKYYNCEFD--DRGNIGKRYR 411

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             D    P  I         G + ++D    ++   +I + +++ E + 
Sbjct: 412 RQDEIGTPFCITYDFDSEEDGAVTVRDRDTMQQERIKIADLKAYFEDKF 460


>gi|226304250|ref|YP_002764208.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226183365|dbj|BAH31469.1| putative threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 406

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G          IRN +           G   + TP++   +   +      + ++ +F  
Sbjct: 24 GLPLWLPDGAVIRNELEKFAAEQAARSGCQGVYTPVMAKKELYERS-GHWSKFSEDMFPE 82

Query: 74 QDDDGQWISLRY 85
              G+   LR 
Sbjct: 83 MKIGGESFLLRP 94


>gi|219113513|ref|XP_002186340.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583190|gb|ACI65810.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 766

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N+++D I++ Y N G+D I TP +   D   K           +F  
Sbjct: 387 GSAFWLPHGARIYNKLIDFIKSHYWNRGYDEIITPNIYNLDLWHKS-GHALHYKDAMFCF 445

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
            D +GQ  +++           A 
Sbjct: 446 -DVEGQEWAMKPMNCPGHCLMFAN 468



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/406 (8%), Positives = 95/406 (23%), Gaps = 39/406 (9%)

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
           AR      + ++   +++     +                    +         ++    
Sbjct: 396 ARIY----NKLIDFIKSHYWNRGYDEIITPNIYNLDLWHKSGHALHYKDAMFCFDVEGQ- 450

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
                   +K  +                 + L   D        L         GL  V
Sbjct: 451 -----EWAMKPMNCPGHCLMFANSIRSYRDLPLRFADFGVLHRNELSG----ALTGLTRV 501

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQ---IDIMVSFLSIDLEKSMHELYELVKGTIAGEKG 268
           +    +       +      +        D+  +F      +      + +      E+ 
Sbjct: 502 RRFQQDDAHIYCREDQIEKEVVDALNFMKDVYDTFGMTYKLELSTRPQKALGDVALWERA 561

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG-FPVMNEKQKPVVFGS 327
              L    ++    G         +     ++       + +     V  + Q P+ F  
Sbjct: 562 EEALANAMDMFAGKGGWRVNPGDGAFYGPKIDIKVMDAMDRVHQCATVQLDFQLPIRFDL 621

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
                  +      +   +             V  +              V++  +   +
Sbjct: 622 QYTTASKEEGQQFARPVMIHRAMLGSVERMFAVLCEHYGGKWPFWLSPRQVMLVPVH--A 679

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +     +     L   G   ++   S   F  +++ A         + G  E + G + I
Sbjct: 680 EFFDYSEDIRAKLHAEGFYVDVD-TSKNTFQKKVRNAQVAQYNFQFVVGKAEVANGSVNI 738

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           ++                       +    I E+++ +K++ +E+K
Sbjct: 739 RN------------------RENQVEGEKKIDEMIAMLKQLREEHK 766


>gi|66806197|ref|XP_636821.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74852684|sp|Q54J66|SYTC1_DICDI RecName: Full=Probable threonyl-tRNA synthetase 1, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|60465220|gb|EAL63315.1| threonyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 710

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/169 (9%), Positives = 52/169 (30%), Gaps = 21/169 (12%)

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
                     D    + +   +           + + ++               ++ T++
Sbjct: 563 IRFDLEYQSDDAAELKKRPVIIHRAILGSVERMMAILIEHTGGKWPLWVSPRQAIVVTVN 622

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
              +     Q   + +  AG   ++   S K    +++ A        ++ G  E +   
Sbjct: 623 KTHN--EYGQKVCKEISDAGFYCDID-DSDKTISKKVREAQLAQYNYILVVGQEEINGNT 679

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + ++                      V + ++ +++L+S  K++++E K
Sbjct: 680 VNVR------------------TRDNVVRGSLTVNDLISEFKQLVKEFK 710



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N++++ IR  Y   GF  + +P + +S  L +      + ++ +F L
Sbjct: 335 GSAFFLPHGTRIYNKLVEFIREEYHRRGFTEVISPSI-FSQKLWEQSGHWQKYSENMFVL 393

Query: 74  -QDDDGQWISLRYDLTAP 90
             D D    SL+      
Sbjct: 394 PVDKDN--FSLKPMNCPG 409


>gi|213416593|ref|ZP_03349737.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 223

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 3/107 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+           +     LR  GI   M     +  G  
Sbjct: 112 DERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVM 170

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
               +    P  I+ G        ++ K    G++   +  +   + 
Sbjct: 171 FADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 217


>gi|126640661|ref|YP_001083645.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 549

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/364 (12%), Positives = 90/364 (24%), Gaps = 20/364 (5%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R  +   G         VD          A     M  T    
Sbjct: 173 FWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAENMFTTHSES 232

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                       + ++ +  L+        +L E     R        G+  V+      
Sbjct: 233 RNYAVKPMNCPCHVQVFNQGLKSY-RDLPIRLAEFGSCHRNEPSGSLHGIMRVRG----F 287

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E  D +   L +  +    E+   +        G + L  ++E 
Sbjct: 288 TQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDLAEK 347

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGR 333
                 ++  ++       G  Y     +        +    +                 
Sbjct: 348 SLADALDAAGLEWELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTIQCDFNLPVRLDAS 404

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +      +          R I  L    +       + PV    M+         
Sbjct: 405 YVTEENERDQPVMLHRAILGSFERFIGILIEHYAGFMP-PWLSPVQACVMNITDSQAEAS 463

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI-----K 448
           +     L+  G+RA   L  ++  G +++       P  ++ G  E   G + +     K
Sbjct: 464 EQVVAKLKENGLRAISDL-RNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGK 522

Query: 449 DLAK 452
           +L  
Sbjct: 523 NLGT 526



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R + ++ G+  I+TP +    +L +        
Sbjct: 164 MQEEAP-GMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDF-TLWEKSGHAANY 221

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+   +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 222 AENMFTTHSES-RNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLH 279


>gi|330953234|gb|EGH53494.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae Cit
           7]
          Length = 173

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 4/114 (3%)

Query: 47  TPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-ARYVAENFDTIVFP 105
            P L   D+  +     +     +++ +D  G+   L  + TA    R  +E        
Sbjct: 1   MPALWGQDTFIEKAGGSEIIG-QMWAFEDKAGRACCLIPEATALFQER--SEALLEGRRE 57

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
              + +   +R E+   GR+R+F Q  ++ +  S + A      +    L+++G
Sbjct: 58  AMFFYVARCYRYERPQAGRYREFTQLGLEILSPSPQQALLRSQAICTGFLDSLG 111


>gi|284929344|ref|YP_003421866.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [cyanobacterium
           UCYN-A]
 gi|284809788|gb|ADB95485.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [cyanobacterium
           UCYN-A]
          Length = 608

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/227 (11%), Positives = 59/227 (25%), Gaps = 3/227 (1%)

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           I  +   L +   K+     +       G     E    +        N +  +      
Sbjct: 371 ILSVFENLQLKNFKARLSFRDPSSNKYIGSDEVWEKSQNAIYRAVKMLNIDYFEAEGEAA 430

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
                      +A+     +   Q                   + +   +    F     
Sbjct: 431 FYGPKLDFIFQDALDREWQLGTVQVDYNLPERFNLEYIGEKGDKHRPIMIHRAPFGSLER 490

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
            + + ++              V +  +      L   +   Q +  + IRAE+   S + 
Sbjct: 491 LIGILIEEYVGDFPLWLSP--VQVRILPVSDLYLDYAKGVMQTMLMSKIRAEVD-TSGER 547

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            G  ++  ++   P+  I G+ E     L I+    G+     I + 
Sbjct: 548 LGKMIRKGEKEKIPVMAIIGSKEMETNSLNIRTRKSGELGLMPINDF 594



 Score = 40.2 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR+ + + +R      G+ P+ TP +   D   K         + +F L
Sbjct: 222 GLPLWTPKGTIIRSVLENFLREEQLKRGYLPVVTPHIGKVDLF-KTSGHWQNYKEDMFPL 280

Query: 74  QDDDG 78
             D+ 
Sbjct: 281 MSDNE 285


>gi|169829162|ref|YP_001699320.1| glycyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|238688185|sp|B1HTI6|SYG_LYSSC RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|168993650|gb|ACA41190.1| Glycyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 461

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/235 (8%), Positives = 56/235 (23%), Gaps = 10/235 (4%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       + + + +       + +           
Sbjct: 225 LEFFCKPGEDLEWHSYWKEFCKNWLLNLGMKEDSMRLRDHEDDELSHYSNATTDIEFKFP 284

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           + +    +      +       D  +      ++ A   ++     
Sbjct: 285 FGWGELWGIADRTDYDLKQHMEHSGEDFTYIDPVSNDRYIPYCIEPSLGADRVTLAFLCD 344

Query: 359 IVALKSLESSTNN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + LE             + P     +        +       LR A    +     
Sbjct: 345 AYDEEELEGDDKRTVLRFHPAIAPFKAAVLPLSKKLSDEATDVWAELRKA-FPVDFD--E 401

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           S++ G + +  D    P  I      +  G + ++      +    I   +++ E
Sbjct: 402 SQSIGKRYRRQDEIGTPFCITYDFDSKEDGQVTVRHRDSMTQERMPISEVKAYIE 456


>gi|167756667|ref|ZP_02428794.1| hypothetical protein CLORAM_02205 [Clostridium ramosum DSM 1402]
 gi|167702842|gb|EDS17421.1| hypothetical protein CLORAM_02205 [Clostridium ramosum DSM 1402]
          Length = 479

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 47/134 (35%), Gaps = 23/134 (17%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                       V+I  +       L K     + L+ AGIR ++   S K+ G +   A
Sbjct: 281 GLVLPPRVAPTQVMIIPIQQQKAGVLDKAYEIEKQLKEAGIRVKVD-ASDKSPGWKFSEA 339

Query: 425 DRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           + R  PL +  G  +       I  ++    ++ + +                    EL+
Sbjct: 340 EMRGVPLRLEIGPKDIENNACVIAKRNDGTKEKYALD-------------------QELI 380

Query: 483 STVKKILQENKEEI 496
           +T++ +L    +E+
Sbjct: 381 NTIETLLDTIHDEM 394


>gi|145636075|ref|ZP_01791745.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|229844174|ref|ZP_04464315.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|145270597|gb|EDK10530.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|229813168|gb|EEP48856.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 643

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 98/366 (26%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L   G+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
             L++ 
Sbjct: 637 LTLLNE 642



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|90021224|ref|YP_527051.1| threonyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|123090560|sp|Q21KE0|SYT_SACD2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|89950824|gb|ABD80839.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Saccharophagus
           degradans 2-40]
          Length = 636

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 38/109 (34%), Gaps = 3/109 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   I + +R +    G++ I+TP +       +     D+    +F++
Sbjct: 261 GMVFWHPNGWSIYTAIEEYMREVQRLNGYEEIKTPQVVDRSLWERS-GHWDKFRDNMFTV 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
           + +  +  +++        +   +   +    P R    G   RNE  G
Sbjct: 320 ESES-RDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGCCHRNEASG 367



 Score = 37.9 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 4/90 (4%)

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I+  +   +    +     VL+   D+ ++ +         L+  G R    L  ++  G
Sbjct: 523 ILIEEYEGAFPAWLAPTQAVLLNITDNQAEYVK---KVENSLKNKGFRVNSDL-RNEKIG 578

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +++    +  P  ++ G  E     + ++
Sbjct: 579 FKIREHTIQKVPYLLVVGDQEVENNSVAVR 608


>gi|71282219|ref|YP_269610.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123747383|sp|Q480A9|SYT_COLP3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71147959|gb|AAZ28432.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 636

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/367 (11%), Positives = 100/367 (27%), Gaps = 17/367 (4%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD-----NVGSSAETADAEMCMMMA 152
           ++         +         +       +  + D D      +   +    +      A
Sbjct: 255 HWQEEAPGMVFWHNDGWTIYTELEKFIREKLHEYDYDEVKAPMMMDRSLWEKSGHWDKYA 314

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D +     ++ +Y I   N      I  +      D                   L G+ 
Sbjct: 315 DGMFTTTSEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRIAEFGCCHRNEPSGSLHGL- 373

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F   + + +E    +     +       ++   +        G +E+
Sbjct: 374 MRVRGFTQDDAHIFCMESQVQAEVKKCIEMVYDVYGSFGFEDVVVKLSTRPDNRIGSDEI 433

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-- 330
              +E         + I        G  Y     +  +     +    +           
Sbjct: 434 WDKAEAGLAQALTDSNIAFEYLPGEGAFYGPKIEFTLM---DCLGRAWQCGTVQLDFALP 490

Query: 331 ---GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
              G  Y G  +      +        + R I  L   E +      + P+  T M+   
Sbjct: 491 ERLGATYVGEDNERYTPVMIHRAILGSLERFIGILIE-EFTGKFPTWLSPIQTTIMNITD 549

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                 +   + L+  G RA++ L  ++  G +++    +  P  ++ G  E   G + +
Sbjct: 550 KQAPYCEKVVKKLKENGFRAKIDL-RNEKIGFKIREHTLKRVPYLLVVGDKEMESGEISV 608

Query: 448 KDLAKGK 454
           +    G+
Sbjct: 609 RT-RSGE 614



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 39/152 (25%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   +   IR     Y +D ++ P++       K     D+   G+F+ 
Sbjct: 262 GMVFWHNDGWTIYTELEKFIREKLHEYDYDEVKAPMMMDRSLWEKS-GHWDKYADGMFT- 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              + +  +++        +   +   +                 +              
Sbjct: 320 TTSEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRIAEFGCCHRNEPSGSLHGLMRVRGF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +     ++++   +   +E V      +
Sbjct: 380 TQDDAHIFCMESQVQAEVKKCIEMVYDVYGSF 411


>gi|319786721|ref|YP_004146196.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465233|gb|ADV26965.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 634

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   +   +   +R +Y   G+  +  P +   D  L K     D     +F 
Sbjct: 262 GLVFWHPKGWSVWQVVEQYMRRVYRETGYGEVRCPQI--LDVSLWKKSGHWDNYQDNMF- 318

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
             + + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 319 FTESEKRTYAVKPMNCPGHVQIFNQGLHSYRDLPIRYGEFGSCHRNEPSGALH 371



 Score = 41.0 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 53/145 (36%), Gaps = 8/145 (5%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL--ESSTNNIKEMGPVLITTMDHDSD 388
           G  Y    S+ +   +        + R I  L           +  +  V++   D  ++
Sbjct: 494 GAEYVDENSQRRHPVMLHRAIVGSMERFIGILIEHHAGQFPAWLAPVQAVVMNITDVQAE 553

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +++ +         G R E  L  ++  G +++    +  P  ++ G  E+  G + ++
Sbjct: 554 YVNEVRKVLA---NQGFRVEADL-RNEKIGFKIREHTLQRVPYLLVVGDREKENGAVAVR 609

Query: 449 DLAKGKEL-SREIKNNESWREARVA 472
               G++L +  + +      ++ +
Sbjct: 610 T-RSGEDLGTMSVSDFADTLRSQQS 633


>gi|218200879|gb|EEC83306.1| hypothetical protein OsI_28675 [Oryza sativa Indica Group]
          Length = 306

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/234 (9%), Positives = 66/234 (28%), Gaps = 7/234 (2%)

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           I+ SF  + L   +    + +       K   +L        K    +      +     
Sbjct: 77  ILESFTGMSLVVHLQRPEKYLGDIETWNKAEQQLTEALNEFGKPWQINEG--DGAFYGPK 134

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           ++       +       +    +  +   +      +  + R    +    G        
Sbjct: 135 IDIGVFDALKRKFQCATLQLDFQLPLRFKLTYSAEDEAKLERPVMIHRAILGSV--ERMF 192

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + L+               ++ ++   S+S+   +     +  AG    +   + +   
Sbjct: 193 AILLEHYNGKWPLWLSPRQAIVCSIS--SNSVEYAKQVRARIHEAGFHVAID-ETDRTIQ 249

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +++ A        ++ G  E   G + ++   K +  +  I +  +  +  VA
Sbjct: 250 KKVREAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITRFKEEVA 303


>gi|154245583|ref|YP_001416541.1| threonyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154159668|gb|ABS66884.1| threonyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 660

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNELVVIS 276
           D++  F     + +E + I    LS   +    E+   +          +  ++    + 
Sbjct: 387 DDAHVFCTEEQMAAECLKINDLILSTYADFGFDEIVVKLSTRPEKRVGSDAVWDHAEEVM 446

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-- 334
             V      ++  +I + I+ G   + G  +E  L   +  E Q            R+  
Sbjct: 447 TRVLAEIEAASGGRIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGA 506

Query: 335 ---DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
              D    +     +             + ++              V++ T+  D+D   
Sbjct: 507 FYVDADGQKKTPVMIHRAICGSMERFTGILIEHFAGHFPLWLAPTQVVVATITSDAD--D 564

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                 ++L+  G+R E+ + + K N     +       P+ ++ G  E +   L I+ L
Sbjct: 565 YAAEVAELLKAEGLRVELDVRNEKINLKV--REHSLAKVPVLLVAGKKEAAERTLSIRRL 622

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVST 484
               +    +    +          +    L   
Sbjct: 623 GSNAQTGGTLDEVVAALVDEAVPPDLKRKALAKA 656


>gi|146413645|ref|XP_001482793.1| hypothetical protein PGUG_04748 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 379

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 16/170 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL---- 73
                 RI N+++  +++    YGF+ + TPL+ Y + L K     D     +F +    
Sbjct: 50  FLPHGTRIMNKLIQFMKHQQMRYGFEEVITPLI-YKNQLWKTSGHWDNYRDDMFKVTGNV 108

Query: 74  ----QDDDGQWISLRYDLTAP-------LARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
               +D       L+               R   E    +      +R            
Sbjct: 109 VHEHEDPQLHEYGLKPMNCPGHCVIFSKFERSYNEFPIRLSDFSSLHRNEASGALSGLTR 168

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
            R        +       E   +    ++ ++ +  GI  N+    ++ R
Sbjct: 169 VRRFHQDDGHIFCEFDQVEDEISNTVNLILESYKVFGIPSNEIKFTLSTR 218


>gi|319897020|ref|YP_004135215.1| threonyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432524|emb|CBY80883.1| threonyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 643

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 99/366 (27%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEGGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNNRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L   G+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRNRE 636

Query: 479 SELVST 484
            +L++ 
Sbjct: 637 LKLLNE 642



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|307322411|ref|ZP_07601768.1| tRNA synthetase class II (G H P and S) [Sinorhizobium meliloti
          AK83]
 gi|306891946|gb|EFN22775.1| tRNA synthetase class II (G H P and S) [Sinorhizobium meliloti
          AK83]
          Length = 379

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 37 YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
          +E      ++TP+++ ++       ++ R  + +F  + + G+ + LR + T P+ 
Sbjct: 17 FERRNTLRVDTPVIQPAEPFLDMAGEDLR--RRIFMTESETGESLCLRPEFTIPVC 70


>gi|157736649|ref|YP_001489332.1| prolyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980098|sp|A8ERT9|SYP_ARCB4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157698503|gb|ABV66663.1| prolyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 568

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 73/252 (28%), Gaps = 16/252 (6%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D S D  K A L +    +     +I+    +    E+     A E+ ++ +      ++
Sbjct: 319 DASEDDIKEAGLVAGYCGLFNLPSNINFIIDLELKDEIGLACGANEEDYHLVNTDLSTLK 378

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
              Y          I               L +    E       G+          +  
Sbjct: 379 DVKYYDLIAVQEGDIC--------ACCGGKLSYTKGIEAGHIFQLGTKYSSAMNANFLDE 430

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG------PVLITTMDHDSDSLSKY- 393
                    G        +VA    ++  +             V I   +   +  +K  
Sbjct: 431 NGKAKPFIMGCYGIGVSRLVAAVIEQNHDDKGCIWTKATAPFMVDIIVSNSKKEEEAKVG 490

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +     L+ AGI   +    +  FG ++   +    P A++ G      G+++I D    
Sbjct: 491 EELYSKLKQAGISTILDDRINARFGFKMSDFELLGFPYAVVIGKK-LEDGLVEIVDRKTL 549

Query: 454 KELSREIKNNES 465
           +++  ++    S
Sbjct: 550 EKIDVKVDEVIS 561



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 9/83 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIE----TPLLEYSDSLGKFLPD 62
             A+   G  D       +  +I   ++   +  G + ++    TPL     +L +    
Sbjct: 31  FIAQTGAGIYDFMPLGKIVLEKIRAIVKEEMDEAGANEVQFGFVTPL-----TLWQESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY 85
                  +   +D       L  
Sbjct: 86  ATTMGAEMLRFKDRKNGEFVLSP 108


>gi|150395629|ref|YP_001326096.1| ATP phosphoribosyltransferase regulatory subunit [Sinorhizobium
          medicae WSM419]
 gi|166219842|sp|A6U6I1|HISZ_SINMW RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|150027144|gb|ABR59261.1| tRNA synthetase class II (G H P and S) [Sinorhizobium medicae
          WSM419]
          Length = 377

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 37 YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
          +E      ++TP+++ ++       ++ R  + +F  + + G+ + LR + T P+ 
Sbjct: 17 FERRNTLRVDTPVIQPAEPFLDMAGEDLR--RRIFMTESETGESLCLRPEFTIPVC 70


>gi|15964540|ref|NP_384893.1| ATP phosphoribosyltransferase regulatory subunit [Sinorhizobium
          meliloti 1021]
 gi|307308488|ref|ZP_07588192.1| tRNA synthetase class II (G H P and S) [Sinorhizobium meliloti
          BL225C]
 gi|20978494|sp|Q92KL6|HISZ_RHIME RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|15073717|emb|CAC45359.1| ATP phosphoribosyltransferase regulatory subunit [Sinorhizobium
          meliloti 1021]
 gi|306901091|gb|EFN31699.1| tRNA synthetase class II (G H P and S) [Sinorhizobium meliloti
          BL225C]
          Length = 379

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 37 YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
          +E      ++TP+++ ++       ++ R  + +F  + + G+ + LR + T P+ 
Sbjct: 17 FERRNTLRVDTPVIQPAEPFLDMAGEDLR--RRIFMTESETGESLCLRPEFTIPVC 70


>gi|323704183|ref|ZP_08115762.1| glycyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536249|gb|EGB26021.1| glycyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 462

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/243 (9%), Positives = 57/243 (23%), Gaps = 22/243 (9%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +  +   E     +       E +   +  ++   + +           
Sbjct: 226 LEFFCKPGEDLEWFNYWKEFCMNWLLNLGLRKENLRFRDHSKEELSHYSNATTDIEYRFP 285

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           F +    +             Y   V+  K                
Sbjct: 286 FGWGELWGIADRTDFDLRRHMEHSGA------DLTYFDPVTNEKYTPYCIEPSVGADRVA 339

Query: 359 IVALKSLESSTNNIKEMGPVLI-----------TTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +  L    +     +    V++             +                LR      
Sbjct: 340 LAFLIDAYNEEVVEENDTRVVLKLHPALSPIKAAVLPLSKKLGENAYKLYDELRK---DF 396

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            +    + + G + +  D    P  I       +   + I+D    +++  +I   +S+ 
Sbjct: 397 VVDYDETGSIGKRYRRQDEIGTPYCITYDFDSLNDESVTIRDRDTMQQIRIKINEVKSYL 456

Query: 468 EAR 470
           EA+
Sbjct: 457 EAK 459


>gi|110639601|ref|YP_679811.1| prolyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122966540|sp|Q11Q45|SYP_CYTH3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110282282|gb|ABG60468.1| prolyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 491

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 23/122 (18%)

Query: 378 VLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAII 434
           V I       D +          L+   I  +       + G   K+A+   +  PL + 
Sbjct: 305 VPIFKTAEQLDLIEATLKPILAALKAKDISVKFDHSDKYSPG--FKFAEYELKGVPLRVA 362

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
            G  +   G +++      ++                   T+P   L  T++K+LQE +E
Sbjct: 363 IGARDIENGTVELARRDTKEKT------------------TVPQEGLADTIEKLLQEIQE 404

Query: 495 EI 496
            I
Sbjct: 405 NI 406


>gi|325972766|ref|YP_004248957.1| prolyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324028004|gb|ADY14763.1| Prolyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 588

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 20/66 (30%), Gaps = 1/66 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                     +I   IR      G   I  PL+  +D   K        +K +    D  
Sbjct: 42  LLPFGFNATKKIEQIIRQEMNAIGGQEILMPLVNPADI-WKETGRYYSIDKEMSRFSDRV 100

Query: 78  GQWISL 83
           G+ + L
Sbjct: 101 GRDMVL 106



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 16/125 (12%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                S         V + ++  D++     +     L  AGI   ++    ++ G +  
Sbjct: 464 DEQGLSLPISVAPMQVHLVSLVKDAEI---GEQIYNKLSDAGIEV-LYDDRKESAGVKFA 519

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIK---DLAKG---------KELSREIKNNESWREAR 470
            AD    P+ I  G      G +++K   +L +          +E    I   E+  + +
Sbjct: 520 DADLIGLPIRITLGNRSLKEGKVEVKLRRNLEESFSFELASVVEETKALIAKLEAELKGQ 579

Query: 471 VAQIT 475
           + +  
Sbjct: 580 IVEKE 584


>gi|302925353|ref|XP_003054078.1| hypothetical protein NECHADRAFT_89892 [Nectria haematococca mpVI
           77-13-4]
 gi|256735019|gb|EEU48365.1| hypothetical protein NECHADRAFT_89892 [Nectria haematococca mpVI
           77-13-4]
          Length = 548

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/534 (10%), Positives = 131/534 (24%), Gaps = 87/534 (16%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R++++I   +     + G   +    +  S+ L +     DR    +F L D  
Sbjct: 23  LLPMGLRVQDKIEKLLDKHMHSVGASRLSLSTI-SSEELWRRSDRLDRVAPELFRLADRK 81

Query: 78  GQWISLRY----DLTAPLA-----------RYVA---ENFDTIVFPCRTYRIGPVFRNEK 119
              + L      ++T  +A           R      +  D         R       + 
Sbjct: 82  EVPLILSPTHEEEITTLVAGTLKSYKDLPIRLYQITRKYRDERRPRHGLLRSREFLMKDL 141

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGIL 179
           +               V ++     +E+ +       + G    D     +    +    
Sbjct: 142 YTFDLTTAAAIETYRLVSAAYRAFFSELKLPYLVAEASSGDMGGDLSHEYHLPSAVGEDT 201

Query: 180 EKIGLHGDDKLNERLIVLRAI------------DKLDKFGLQGVKLLLGEGRTDNSGDFT 227
                      N+ +   RA             D     G+   + +L       S +  
Sbjct: 202 VVNCNSCGYTANDEVATARAPSASKDALAIPASDIRVWRGISQDRKVLVNAWYPQSSEAF 261

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG--TIAGEKGFNELVVISELVRKSGYN 285
             + L    +   VS L   ++  +    E ++             L    E +R+    
Sbjct: 262 SESGLNLHAVKSAVSELDTSIDDPLPFWSEALESGKPQVINVVDARLAPTFESLREQLPL 321

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP-------------VVFGSVGGGG 332
             +   S  +       T    EA+    + +    P                 +   G 
Sbjct: 322 LPKTLESHEVEHSTVGGTDST-EALNLGRITDGDGCPRCEEGTLKIHRALECGHTFHLGT 380

Query: 333 RYDGLVSRFKGQNVPATG-------------------------FSIGISRLIVALKSLES 367
           RY   +                                       I  +   +       
Sbjct: 381 RYSVPLDACVFLPQSELPKVAKEEGLKPGSRVPVQMGCHGVGVSRIFGAVAEILADERGL 440

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-----GIRAEMFLGSSKNFGNQLK 422
           +         V +           +       L        G+   +     ++FG ++ 
Sbjct: 441 NWPRAIAPFEVAVIPTPGLD---KESIEIYDNLVAGSSSQPGLDVVLD-DRKQSFGWKMN 496

Query: 423 YADRRNCPLAIIQGTGERSRG---MLQIKDLAKGKELSREIKNNESWREARVAQ 473
            AD    P+ +I G     +G    +Q + L+  +  + +++    +    + Q
Sbjct: 497 DADIVGYPVVVILGKA-FKQGRLCEVQCRQLSVKE--NVKLEELPRFISGLLDQ 547


>gi|302922168|ref|XP_003053410.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734351|gb|EEU47697.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 741

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +RI N ++D ++  Y   GF  + +P +  SD L K         + +F+ 
Sbjct: 339 GSTFFLPHGVRIYNALMDLLKGEYRKRGFTEVMSPNVYKSD-LWKISGHWGHYEENMFTF 397

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
            D + +   L+        +  A 
Sbjct: 398 -DVEKERYGLKPMNCPGHCKIFAH 420


>gi|241758603|ref|ZP_04756718.1| threonine--tRNA ligase [Neisseria flavescens SK114]
 gi|241321255|gb|EER57427.1| threonine--tRNA ligase [Neisseria flavescens SK114]
          Length = 637

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+   +     +     L+ AG R E+ L  ++  G +++   +   P  I
Sbjct: 535 WLAPVQMVIMNITENQADYCREVAVKLQAAGFRVELDL-RNEKIGYKIRDNSQYRFPYQI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E+    + ++        + ++ + +        Q  I    LV+ 
Sbjct: 594 VVGDKEKQENKVAVR------RKAEDLGSLDVDDFIAQLQQEIT-DALVNH 637



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R      G+  ++TP +    +  +     +     +F +
Sbjct: 261 GMVFWHPKGWALWQVIEQHMRKELNVAGYKEVKTPQIMDK-TFWEKSGHWENYKDNMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +       +    P R    G   RNE  G   
Sbjct: 319 TSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH 370


>gi|145640808|ref|ZP_01796390.1| prolyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274322|gb|EDK14186.1| prolyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 430

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 25/90 (27%), Gaps = 1/90 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +   + L++ G+         +  G      +    P  +I G    
Sbjct: 338 MNMHKSESVQKYAEELYRTLQSQGVDVIFDDRKER-PGVMFADMELIGVPHMVIIGEKNL 396

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
             G ++ K+   G++         S    +
Sbjct: 397 DNGEIEYKNRRTGEKEMISKDQLLSVLNEK 426


>gi|109947885|ref|YP_665113.1| prolyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123173273|sp|Q17W62|SYP_HELAH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|109715106|emb|CAK00114.1| proS [Helicobacter acinonychis str. Sheeba]
          Length = 577

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 1/78 (1%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             ++  G  +      ++ ++I +      + +G   I         SL +     D+  
Sbjct: 32  IYQIGSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYG 90

Query: 68  KGVFSLQDDDGQWISLRY 85
           K +   +D  G    L  
Sbjct: 91  KELLVFKDRKGNDFVLSP 108



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 62/210 (29%), Gaps = 19/210 (9%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           +L     L+                 R L+Y+       I        K     F    G
Sbjct: 380 DLKGFENLIYADIIQVKESDCCPNCQRALKYHKSLEVGHIFKLSQGYAKSLKASFLDKNG 439

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMD 384
             ++                + IGISRL+ A+   +        T N      V++ +  
Sbjct: 440 KEQF-----------FEMGCYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNL 488

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D           + L   G+   +     + FG +++  +     LA+I G        
Sbjct: 489 KDEVQKKLAFEVYERLLQRGVDVLLDDRDVR-FGAKMRDFELIGERLALIVGKQTLENKE 547

Query: 445 LQ-IKDLAKGKELSREIKNNESWREARVAQ 473
            + IK     K+  ++ +  E   E   ++
Sbjct: 548 FECIKRANLEKQTLKDRELEEKILEILESE 577


>gi|269836498|ref|YP_003318726.1| glycyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269785761|gb|ACZ37904.1| glycyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 469

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 39/125 (31%), Gaps = 21/125 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +         +  +    + ++K      +LR            +++ G + +  D 
Sbjct: 366 LRFHPRMAPYKAAVLPLMKKPELVAKANEVWDLLRPE-FPT--DYDETQSIGRRYRRQDE 422

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  +           + I+D    +++                   +PI+ELV T++
Sbjct: 423 IGTPFCVTIDYDTLEDDSVTIRDRDSMEQV------------------RVPIAELVPTLR 464

Query: 487 KILQE 491
           + L+ 
Sbjct: 465 ERLER 469


>gi|323142407|ref|ZP_08077233.1| threonine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413100|gb|EFY03993.1| threonine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 597

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/96 (11%), Positives = 32/96 (33%), Gaps = 1/96 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            M P  +  +     ++         L   G RA +    ++  G +++       P  +
Sbjct: 495 WMAPEQVRFLPVTDRAVDYCYELAHKLEANGYRATVD-ARNEKIGKKIREGQLEKIPYML 553

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           + G  +     +  ++  +G   +   +  E+  + 
Sbjct: 554 VVGDRDMENNTVSPRNRTEGDMGAMSFEAFEAILKD 589



 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+   +   + ++ +  G+   +TPL+   D   +     D    G+F L
Sbjct: 211 GLPILLPKGARVIQLLQRWVEDVEQKRGYLLTKTPLMAKRDLY-RISGHWDHYLDGMFIL 269

Query: 74  QDDDGQW---ISLRYDLTAPL 91
            D   +     +LR  +T P 
Sbjct: 270 GDPHDETKECFALRP-MTCPF 289


>gi|302389804|ref|YP_003825625.1| prolyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200432|gb|ADL08002.1| prolyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 479

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 46/131 (35%), Gaps = 3/131 (2%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           L+           ++        + L K +   Q L+    R E+        G +    
Sbjct: 281 LKLPPRVAPIQVVIVPIFGQQKEEILEKSRSLYQTLKNNNFRVELDDRDEYTPGWKFNEW 340

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + +  P+ +  G  + ++  + +     G+++S +  +   +    +  I    + +   
Sbjct: 341 EMKGVPVRLEIGPKDLAQNQVLLVRRDTGEKISVKEADLIPYLTDLLEGI---QTNMYKQ 397

Query: 485 VKKILQENKEE 495
            KK ++EN  E
Sbjct: 398 AKKFMEENTRE 408


>gi|302761720|ref|XP_002964282.1| hypothetical protein SELMODRAFT_230438 [Selaginella moellendorffii]
 gi|300168011|gb|EFJ34615.1| hypothetical protein SELMODRAFT_230438 [Selaginella moellendorffii]
          Length = 604

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 9/99 (9%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQ 435
             +  +  +       +  +  LR AGI  ++   + ++ G   +YA  D    P AI  
Sbjct: 489 CTVFPLVQNPKLDGIARAISAKLREAGIGNKID-TTGRSIGR--RYARTDEIGVPFAITV 545

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +     G + ++D     ++   ++          A  
Sbjct: 546 DS---EDG-VTVRDRDSKDQIRVPLEEVVDLIADMSAGK 580


>gi|56421965|ref|YP_149283.1| glycyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81675673|sp|Q5KUC1|SYG_GEOKA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|56381807|dbj|BAD77715.1| glycyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 460

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/239 (7%), Positives = 61/239 (25%), Gaps = 10/239 (4%)

Query: 241 VSFLSIDLEK--SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E+        +  K  +       + + + +  ++   + +           
Sbjct: 224 LEFFCKPGEELQWFDYWKQFCKDWLLSLGMKEDNIRLRDHAKEELSHYSNATTDIEYHFP 283

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   + +    +              +  +      ++ A   ++     
Sbjct: 284 FGWGELWGIASRTDYDLKRHMEYSGEDFHYLDQETNERYIPYCIEPSLGADRVTLAFMID 343

Query: 359 IVALKSLES-----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + LE        +    + P     +              + L        +    
Sbjct: 344 AYDEEELEDGTTRTVMHLHPALAPYKAAVLPLSKKLADGAHRIYEELVKH---FMVDYDE 400

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + + G + +  D    P  I         G + ++D    +++   I   +++ E ++A
Sbjct: 401 TGSIGKRYRRQDEIGTPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGELKAFLEEKIA 459


>gi|325261980|ref|ZP_08128718.1| glycine--tRNA ligase [Clostridium sp. D5]
 gi|324033434|gb|EGB94711.1| glycine--tRNA ligase [Clostridium sp. D5]
          Length = 463

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/226 (7%), Positives = 58/226 (25%), Gaps = 8/226 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
                  +     ++     ++ V   +  ++     ++       +    +        
Sbjct: 238 DWFAYWKQFCLDWLSSLGLKDDEVRYRDHDQEELSFYSKATTDVEFLFPFGWGELWGIAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   ++      S     + +  +      ++ A    +         + LE   
Sbjct: 298 RTDYDLTQHQEVSKQDMSYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGD 357

Query: 370 NNIKEMGP-----VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                        V I  +          +     L +     E       N G + +  
Sbjct: 358 MRTVMHFHPALAPVKIGVLPLSKKLNEGAEKVFAEL-SKHYNCEFD--DRGNIGKRYRRQ 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           D    P  +         G + ++D    ++   +I++ +++ E +
Sbjct: 415 DEIGTPFCVTYDFDSEEDGAVTVRDRDSMEQERIKIEDLKAYFEEK 460


>gi|58263294|ref|XP_569057.1| threonine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134108684|ref|XP_776995.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259678|gb|EAL22348.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223707|gb|AAW41750.1| threonine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 772

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 17/118 (14%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +          Q   +  + AG+ AE+ L  +     +++ A        ++ G  
Sbjct: 668 QVVVIPVAKPFTEYAQKVAKTFQEAGLYAEVDLTDN-TLNKKIRNAQTAQWNFIMVVGQD 726

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           E     + I++                  E +  + T+ +S  V  + K L+E+K  +
Sbjct: 727 ELDAQAVNIRNRDD---------------EVQGREETVALSRAVEQIVK-LKESKAAV 768



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI N ++  I++ Y   GF  + +P + ++ +L K         + +F L
Sbjct: 383 GSAFFLPMGMRIYNTLMSFIKDEYFKRGFSEVGSPNI-FNANLWKTSGHWQNYAEDMFQL 441

Query: 74  QDDDGQWISLRYDLTAP 90
           +  D + ++L+      
Sbjct: 442 K-ADEEQLALKPMNCPG 457


>gi|311273541|ref|XP_003133917.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 384

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N ++D IR+ Y   GF  + TP + Y+  L          +  +FS + + 
Sbjct: 304 FLPKGAYIYNTLIDFIRSEYRKRGFQEVVTPNI-YNSRLWVTSGHWQHYSDNMFSFEVEK 362

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 363 -ELFALKPMNCPG 374


>gi|225571168|ref|ZP_03780166.1| hypothetical protein CLOHYLEM_07256 [Clostridium hylemonae DSM
           15053]
 gi|225159999|gb|EEG72618.1| hypothetical protein CLOHYLEM_07256 [Clostridium hylemonae DSM
           15053]
          Length = 480

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
             ++  +   +I    H    L +  +    L+ AG R ++   S K+ G +    +   
Sbjct: 286 PPHVAPVECRIIPIAQHKEGVLDRANVLLDELKKAGYRVKID-DSEKSPGWKFSEQEMLG 344

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            P  I  G  +  +  + +                   R     +I + + E+ + ++ I
Sbjct: 345 IPTRIEIGPKDIEKNQVVV------------------VRRDTREKIIVSLDEIATKLRDI 386

Query: 489 LQENKEEI 496
           L+  +E++
Sbjct: 387 LETIQEDM 394


>gi|223997660|ref|XP_002288503.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220975611|gb|EED93939.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 592

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 1/86 (1%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +      +   +   +     G+R E+  G+ +    Q++ A++   P+  + G  E   
Sbjct: 483 LPVTDAVVDYCKEVAKKANKMGLRVEVDRGAER-LAKQIRNAEQSRIPVMAVVGMKEMEE 541

Query: 443 GMLQIKDLAKGKELSREIKNNESWRE 468
           G L ++    G   S  + +  S  +
Sbjct: 542 GTLALRSRKLGDLGSFAVDDLLSELK 567



 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R +I D  +  +    +D + TP +   D L K     D   +G+F  
Sbjct: 199 GLVFWHPKGSTVRRKIEDFWKEAHIAQDYDIVYTPHIANLD-LWKTSGHYDFYREGMFDQ 257

Query: 74  QDDDGQWISLRYDLTA 89
            D + +   ++     
Sbjct: 258 MDVENEVYQIKPMNCP 273


>gi|325000692|ref|ZP_08121804.1| threonyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 682

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 40/112 (35%), Gaps = 10/112 (8%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +  +  V I   D   D +   +     LR  GIR ++  G  +    +++   
Sbjct: 565 GAFPAWLAPVQVVGIPVTDTQEDYV---REIAARLRAEGIRIDVDAGDDR-MQKKIRTHT 620

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVA 472
            +  P  ++ G  +   G +  +    G +     +   +++  +W  +R  
Sbjct: 621 LQKVPFLLLAGGRDVEAGAVSFR-FRDGSQTNGVPVDDAVRSIVAWVRSRTN 671


>gi|331086020|ref|ZP_08335103.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330406943|gb|EGG86448.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 462

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/228 (7%), Positives = 61/228 (26%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     ++      E + + +   +     ++       +    +        
Sbjct: 237 EWFAYWKKFCLDWLSSLGLKEEEIRVRDHSPEELCFYSKATSDVEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES-- 367
              + +   ++      +     + +  +      ++ A    +         + LE   
Sbjct: 297 RTDYDLSQHQEVSKQDLTYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGD 356

Query: 368 ---STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + PV I  +          +     L +     E       N G + +  
Sbjct: 357 TRTVMHFHPALAPVKIGVLPLSKKLNEGAEKVFAEL-SKTYNCEFD--DRGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + ++D    ++   +I++ +++ E +  
Sbjct: 414 DEIGTPFCVTYDFESEEDGAVTVRDRDTMEQERIKIEDLKAYFEKKFE 461


>gi|295693387|ref|YP_003601997.1| threonyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031493|emb|CBL50972.1| Threonyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 645

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  +   I  R + +  G+  + TP+L   D+  K           +F
Sbjct: 260 GLPYWMPKGATIRRVVERYIIDREVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYRDDMF 316

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ + LR        +    +  +    P R   +G + R EK          
Sbjct: 317 PPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRV 376

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                +T  A++  ++ D  +   I    + +   + K  D       
Sbjct: 377 REMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDE 436

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 437 MWERSQKM 444



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 3/138 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN-IKEMGPVLITTMDHDSDSLS 391
            Y G         +   G    + R I  L  +             V I  ++ D+    
Sbjct: 500 TYVGQDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQVEIIPVNLDAHG-E 558

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +   Q L   G RAE+    ++  G +++ +  +  P  ++ G  E     + ++   
Sbjct: 559 YAEKVRQELAKRGFRAEVD-TRNEKMGYKIRESQTQKVPYTLVLGDDEMKANGVNVRPYG 617

Query: 452 KGKELSREIKNNESWREA 469
             +E S  + +     +A
Sbjct: 618 TDQENSMSLDDFIKEIDA 635


>gi|291398822|ref|XP_002716008.1| PREDICTED: prolyl-tRNA synthetase (mitochondrial)(putative)
           [Oryctolagus cuniculus]
          Length = 478

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 15/153 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   +  P L  ++ L +     D   K +  LQD  
Sbjct: 93  LLPYTVRALEKLVRLIDQEMQAVGGQKVSLPSLSPAE-LWRATQRWDLMGKELLRLQDRH 151

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 152 GKEYCLGPTHEEVVTALVA---SQKNLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFY 208

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D+   +A      +C         +G
Sbjct: 209 MKDMYTFDSSPEAARQTYGLVCDAYCSLFSRLG 241


>gi|215446866|ref|ZP_03433618.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289758745|ref|ZP_06518123.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289714309|gb|EFD78321.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T85]
          Length = 692

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 43/112 (38%), Gaps = 5/112 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    + ++  +     L++ G+RAE+     +     + + +    P  +
Sbjct: 577 WLAPVQVVGIPVADEHVAYLEEVATQLKSHGVRAEVDASDDRMAKKIVHHTN-HKVPFMV 635

Query: 434 IQGTGERSRGMLQIKDLAKGKE---LSREIKNNESWREARVAQITIPISELV 482
           + G  + + G +  +      +   ++R+             +  +P +ELV
Sbjct: 636 LAGDRDVAAGAVSFR-FGDRTQINGVARDDAVAAIVAWIADRENAVPTAELV 686


>gi|154503764|ref|ZP_02040824.1| hypothetical protein RUMGNA_01588 [Ruminococcus gnavus ATCC 29149]
 gi|153795864|gb|EDN78284.1| hypothetical protein RUMGNA_01588 [Ruminococcus gnavus ATCC 29149]
          Length = 521

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 19/128 (14%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
             +I  +   +I    H    L K       L+ AG RA +   S K+ G +    +   
Sbjct: 327 PPHIAPVQTRVIPIAQHKEGVLDKANELLAALKAAGYRASID-DSEKSPGWKFSEQEMVG 385

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            P  I  G  +   G + +                   R     +I + + EL   + +I
Sbjct: 386 IPTRIEIGPKDIENGQVVV------------------VRRDTREKIVVAMDELTEKLSEI 427

Query: 489 LQENKEEI 496
           L+  ++++
Sbjct: 428 LETIQKDM 435


>gi|254365284|ref|ZP_04981329.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|134150797|gb|EBA42842.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis str.
           Haarlem]
          Length = 692

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 43/112 (38%), Gaps = 5/112 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    + ++  +     L++ G+RAE+     +     + + +    P  +
Sbjct: 577 WLAPVQVVGIPVADEHVAYLEEVATQLKSHGVRAEVDASDDRMAKKIVHHTN-HKVPFMV 635

Query: 434 IQGTGERSRGMLQIKDLAKGKE---LSREIKNNESWREARVAQITIPISELV 482
           + G  + + G +  +      +   ++R+             +  +P +ELV
Sbjct: 636 LAGDRDVAAGAVSFR-FGDRTQINGVARDDAVAAIVAWIADRENAVPTAELV 686


>gi|308379255|ref|ZP_07485665.2| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu010]
 gi|308357619|gb|EFP46470.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu010]
          Length = 697

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 43/112 (38%), Gaps = 5/112 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    + ++  +     L++ G+RAE+     +     + + +    P  +
Sbjct: 582 WLAPVQVVGIPVADEHVAYLEEVATQLKSHGVRAEVDASDDRMAKKIVHHTN-HKVPFMV 640

Query: 434 IQGTGERSRGMLQIKDLAKGKE---LSREIKNNESWREARVAQITIPISELV 482
           + G  + + G +  +      +   ++R+             +  +P +ELV
Sbjct: 641 LAGDRDVAAGAVSFR-FGDRTQINGVARDDAVAAIVAWIADRENAVPTAELV 691


>gi|310816588|ref|YP_003964552.1| ATP phosphoribosyltransferase regulatory subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308755323|gb|ADO43252.1| ATP phosphoribosyltransferase regulatory subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 355

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 95/328 (28%), Gaps = 42/328 (12%)

Query: 36  IYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYV 95
           ++   G + +E  +L+ +D L     ++ R     +   D     + LR D T PL   V
Sbjct: 20  LFTAAGAEIVEADILQPADVLLDLYGEDIRARA--YVTNDPLRGEMMLRPDFTVPL---V 74

Query: 96  AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL 155
             +      P R    G VFR ++   G               +   ADAE+   +   L
Sbjct: 75  QMHMAAGAGPGRYAYAGEVFRRQEVSAGPAEFIQVGFELFTEQAEADADAEVYATITAAL 134

Query: 156 EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
             +     +    + +  IL   +  +      K      V R           G +  L
Sbjct: 135 GDL-----NVQAAMGDIGILVSAVRALDTSDARKAALLRHVWRPRRFRLLLDRFGGRQPL 189

Query: 216 GEGRTDNSGDFTKGANLT--SEQIDIMVSF----------------------LSIDLEKS 251
              R D   D      L    E    + +                       ++    ++
Sbjct: 190 PAPRADVLADAPPAFGLRSMDEVAARLDAMREDAATPPIPPAQMALFDEILAVAAPAPQA 249

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           + EL ++             L +  E +   G +   +   +T  R          E   
Sbjct: 250 LRELRDIASRYAGIAPAVARLSLRMEALTARGIDLAEVAFETTFGR-------TALEYYD 302

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVS 339
           GF V         F  V  GGRYD L  
Sbjct: 303 GF-VFGLYAAGRHFPPVASGGRYDALTR 329


>gi|218130015|ref|ZP_03458819.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697]
 gi|217987818|gb|EEC54144.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697]
          Length = 646

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/461 (10%), Positives = 109/461 (23%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +  P                  NK ++ 
Sbjct: 261 KGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCP---------------PIGNKLLY- 304

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                  G   +  K          + +
Sbjct: 305 ------------------------------------ITSGHYAKYGKDSFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      + + +             R    G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCMIYKNSPRSYKDL-----------PLRLAEFGTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHFENFEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DENWEKAEQAIIEACEEKGLKAKVEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   + +              D    R    +    G    + R +  L    +    
Sbjct: 495 NLPERFQLEYTGA----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 541

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +          Q     L+   +RA +    ++  G +++  + +  P 
Sbjct: 542 LW-LTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVD-ERNEKIGRKIRDNEMKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +I G  E     + ++   +G + + + +         V 
Sbjct: 600 MLIVGEKEAENREVSVRKQGEGDQGTMKFEEFAKKVNEEVQ 640


>gi|126657277|ref|ZP_01728443.1| threonyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126621548|gb|EAZ92259.1| threonyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 607

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 3/131 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           +R +   +    F      + + ++           + P+ +  +      L   +    
Sbjct: 472 NRHRPVMIHRAPFGSLERLIGILIEEYAGDFPLW--LAPIQVRLLPVSDVQLDYVKDIAN 529

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            + + GIRAE    S +  G  ++  +++  P+  I G  E     L I+  A G+  + 
Sbjct: 530 KMLSLGIRAE-ADTSGERLGKMIRNGEKQKIPVMAIVGAKEVEANALSIRTRASGELGTM 588

Query: 459 EIKNNESWREA 469
            +         
Sbjct: 589 AVDEVIEKLRD 599



 Score = 38.3 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR+ + D ++      G+ P+ TP +   D   K         + +F
Sbjct: 221 GLPLWTPKGTIIRSTLEDFLKQEQLKRGYLPVVTPHIGRVDLF-KISGHWQNYKEDMF 277


>gi|119505276|ref|ZP_01627351.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119458967|gb|EAW40067.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 639

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/152 (10%), Positives = 43/152 (28%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   I   +R     + ++ I+TP +       +     D+   G+F+L
Sbjct: 261 GMVFWHPAGWTIYQVIESYMRKQQLRFDYEEIKTPQVVDISLWQRS-GHADKFASGMFTL 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D D +  +++        +   +   +                 +              
Sbjct: 320 -DADDRQFAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +     +A++   +A  ++ +     D+
Sbjct: 379 TQDDAHIFCTEAQIQSEVATFIDMLHEVYADF 410



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
                     +  Q     L+ AG R    L  ++  G +++  +    PL ++ G  E 
Sbjct: 542 IVAPITDKQGAYAQQVAADLKEAGFRVGTDL-RNEKIGFKIREHELAKVPLVLVVGDKEM 600

Query: 441 SRGMLQIK 448
           + G + ++
Sbjct: 601 AAGTVAVR 608


>gi|15609751|ref|NP_217130.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15842154|ref|NP_337191.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31793799|ref|NP_856292.1| threonyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638501|ref|YP_978725.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148662454|ref|YP_001283977.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823808|ref|YP_001288562.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167968044|ref|ZP_02550321.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404564|ref|ZP_03416745.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412399|ref|ZP_03421153.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215428017|ref|ZP_03425936.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215431569|ref|ZP_03429488.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|218754354|ref|ZP_03533150.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558618|ref|ZP_03537694.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224990995|ref|YP_002645682.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253798303|ref|YP_003031304.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 1435]
 gi|254551665|ref|ZP_05142112.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187628|ref|ZP_05765102.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260201742|ref|ZP_05769233.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260205937|ref|ZP_05773428.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289444154|ref|ZP_06433898.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289448265|ref|ZP_06438009.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CPHL_A]
 gi|289553596|ref|ZP_06442806.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 605]
 gi|289570786|ref|ZP_06451013.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T17]
 gi|289575325|ref|ZP_06455552.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis K85]
 gi|289746408|ref|ZP_06505786.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis 02_1987]
 gi|289751239|ref|ZP_06510617.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T92]
 gi|289754734|ref|ZP_06514112.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289762788|ref|ZP_06522166.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis GM 1503]
 gi|294994277|ref|ZP_06799968.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635225|ref|ZP_06953005.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297732218|ref|ZP_06961336.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298526090|ref|ZP_07013499.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776889|ref|ZP_07415226.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu001]
 gi|306780653|ref|ZP_07418990.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu002]
 gi|306785417|ref|ZP_07423739.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu003]
 gi|306790017|ref|ZP_07428339.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu004]
 gi|306794098|ref|ZP_07432400.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu005]
 gi|306798512|ref|ZP_07436814.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu006]
 gi|306804375|ref|ZP_07441043.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu008]
 gi|306807585|ref|ZP_07444253.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu007]
 gi|306969787|ref|ZP_07482448.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu009]
 gi|307080714|ref|ZP_07489884.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu011]
 gi|307085303|ref|ZP_07494416.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu012]
 gi|313659553|ref|ZP_07816433.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039692|sp|P67583|SYT_MYCBO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|54042049|sp|P67582|SYT_MYCTU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225463|sp|A1KLW4|SYT_MYCBP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225467|sp|A5U5W5|SYT_MYCTA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783528|sp|C1AF85|SYT_MYCBT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2104299|emb|CAB08628.1| PROBABLE THREONYL-TRNA SYNTHETASE THRS (THREONINE-TRNA
           SYNTHETASE)(ThrRS) (THREONINE-TRNA LIGASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|13882439|gb|AAK47005.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31619393|emb|CAD94831.1| PROBABLE THREONYL-TRNA SYNTHETASE THRS (THREONINE-TRNA
           SYNTHETASE)(ThrRS) (THREONINE-TRNA LIGASE)
           [Mycobacterium bovis AF2122/97]
 gi|121494149|emb|CAL72627.1| Probable threonyl-tRNA synthetase thrS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148506606|gb|ABQ74415.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722335|gb|ABR06960.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis F11]
 gi|224774108|dbj|BAH26914.1| threonyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319806|gb|ACT24409.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 1435]
 gi|289417073|gb|EFD14313.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289421223|gb|EFD18424.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CPHL_A]
 gi|289438228|gb|EFD20721.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 605]
 gi|289539756|gb|EFD44334.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis K85]
 gi|289544540|gb|EFD48188.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T17]
 gi|289686936|gb|EFD54424.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis 02_1987]
 gi|289691826|gb|EFD59255.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis T92]
 gi|289695321|gb|EFD62750.1| threonyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289710294|gb|EFD74310.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis GM 1503]
 gi|298495884|gb|EFI31178.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214743|gb|EFO74142.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu001]
 gi|308326483|gb|EFP15334.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu002]
 gi|308329935|gb|EFP18786.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu003]
 gi|308333550|gb|EFP22401.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu004]
 gi|308337578|gb|EFP26429.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu005]
 gi|308341244|gb|EFP30095.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu006]
 gi|308345982|gb|EFP34833.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu007]
 gi|308349051|gb|EFP37902.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu008]
 gi|308352705|gb|EFP41556.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu009]
 gi|308361561|gb|EFP50412.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu011]
 gi|308365172|gb|EFP54023.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis SUMu012]
 gi|323718811|gb|EGB27968.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis CDC1551A]
 gi|326904227|gb|EGE51160.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis W-148]
 gi|328458073|gb|AEB03496.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis KZN 4207]
          Length = 692

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 43/112 (38%), Gaps = 5/112 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    + ++  +     L++ G+RAE+     +     + + +    P  +
Sbjct: 577 WLAPVQVVGIPVADEHVAYLEEVATQLKSHGVRAEVDASDDRMAKKIVHHTN-HKVPFMV 635

Query: 434 IQGTGERSRGMLQIKDLAKGKE---LSREIKNNESWREARVAQITIPISELV 482
           + G  + + G +  +      +   ++R+             +  +P +ELV
Sbjct: 636 LAGDRDVAAGAVSFR-FGDRTQINGVARDDAVAAIVAWIADRENAVPTAELV 686


>gi|320353536|ref|YP_004194875.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus
           propionicus DSM 2032]
 gi|320122038|gb|ADW17584.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus
           propionicus DSM 2032]
          Length = 641

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            M+   D     +     LR  G+R +  +  ++    +++ A     P  +I G  E+ 
Sbjct: 548 IMNITDDQGEYCEQVHARLRAMGVRIDKDV-RNEKLNYKIREAQLMKVPYMLIVGEREKQ 606

Query: 442 RGMLQIKDLAKGK 454
            G + ++    G+
Sbjct: 607 EGTVTVRK-RDGE 618



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   +R  I D  ++ +   G+  + TP +   D L K     D   + ++S  + D
Sbjct: 269 WQPRGALLRRLIEDYWKDEHYRNGYQLLYTPHIARQD-LWKTSGHLDFYGENMYSAMEID 327

Query: 78  GQWISLRYDLTA 89
                L+     
Sbjct: 328 EVMYQLKPMNCP 339


>gi|207343684|gb|EDZ71074.1| YKL194Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 358

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 36/81 (44%), Gaps = 6/81 (7%)

Query: 14  GFADCPTKEIRIRNRILD--SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G         +I N++++   ++  ++ +GF+ + TPL+ Y  +L +     +     +F
Sbjct: 57  GSMFFLPNGAKIFNKLIEFMKLQQKFK-FGFNEVVTPLI-YKKTLWEKSGHWENYADDMF 114

Query: 72  SLQ--DDDGQWISLRYDLTAP 90
            ++  D++ +   L+      
Sbjct: 115 KVETTDEEKEEYGLKPMNCPG 135


>gi|120554978|ref|YP_959329.1| threonyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166223352|sp|A1U2C3|SYT_MARAV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120324827|gb|ABM19142.1| Ser-tRNA(Thr) hydrolase [Marinobacter aquaeolei VT8]
          Length = 641

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   +R     +G+  I+TP +  S +L +     D+ 
Sbjct: 255 MQEEAP-GMVFWHPDGWSLYQEVEQYMRAQQHKHGYKEIKTPQV-VSRTLWEKSGHWDKF 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+  + +    +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 KDDMFT-TESEKHDYAIKPMNCPCHVQVFNQGLKSYKDLPLRLAEFGSCHRNEASGALH 370



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/372 (10%), Positives = 93/372 (25%), Gaps = 7/372 (1%)

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
                          + +     V S      +       D +     +++DY I   N 
Sbjct: 274 QEVEQYMRAQQHKHGYKEIKTPQVVSRTLWEKSGHWDKFKDDMFTTESEKHDYAIKPMNC 333

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
                +  +      D                   L G+ + +     D++  F +   +
Sbjct: 334 PCHVQVFNQGLKSYKDLPLRLAEFGSCHRNEASGALHGL-MRVRGFTQDDAHIFCEEDAI 392

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             E    +     I  +    E+   +        G +E+   SE   +   N   +   
Sbjct: 393 QEEVSAFIAMLHEIYADFGFSEILYKLSTRPEKRVGSDEVWDKSEAALEQALNREGVDWE 452

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +        + +              G         R     +   
Sbjct: 453 LLPGEGAFYGPKIEFSLKDCLGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVMLHRA 512

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   + + ++  E +         V +  +          Q   + L ++G R   
Sbjct: 513 VLGSFERFIGILIEEYEGAFPTWLAPTQVAVLNI--TDKQRDYCQNLAKKLDSSGYRVNA 570

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            L  ++  G +++       P  ++ G  E     + ++        +  + + E    A
Sbjct: 571 DL-RNEKIGFKIREHTLNKVPYLVVVGDKEIENNAVAVRTRKGEDLGTMSVDDFEKLLAA 629

Query: 470 RVAQITIPISEL 481
            V +     +E+
Sbjct: 630 DVERKGRTKTEI 641


>gi|293400866|ref|ZP_06645011.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305892|gb|EFE47136.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 577

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/128 (10%), Positives = 41/128 (32%), Gaps = 2/128 (1%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              V++  + +            + L   G R
Sbjct: 450 HRVIFGSIERFIGILIEHYAGHFPTWLAPTQVMVVPVHY-ERHAQAANAINEKLLAMGFR 508

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           ++     ++  G +++ A     P  ++ G GE     + ++     + ++  ++   + 
Sbjct: 509 SK-SDARNEKLGYRIREAQLAKIPYQLVIGDGEVEANTVTVRRAQSKESVTMPVEEFIAK 567

Query: 467 REARVAQI 474
             A V + 
Sbjct: 568 LSAEVKEK 575



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + IRN + +     +    +  I+TP++   + L +         + +++ 
Sbjct: 201 GMPFFLPNGMIIRNLLENFWYEEHTKENYKFIKTPIMMSKE-LWEVSGHWANYKENMYTT 259

Query: 74  QDDDGQWISLRYDLTAP 90
              D +  +++      
Sbjct: 260 M-VDDREFAIKPMNCPG 275


>gi|257869604|ref|ZP_05649257.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803768|gb|EEV32590.1| prolyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 575

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/502 (10%), Positives = 127/502 (25%), Gaps = 74/502 (14%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+  +I   +R          +  P+L   + L +    +    + ++ L D +
Sbjct: 50  YLPLAQRVLEKIKKLMREELAKIDAVEMTMPVLLPLE-LWQSTGRDGLYGRSLYQLTDRN 108

Query: 78  GQWISLRY-------DL---------TAPLARYVAE--NFDTIVFPCRTYRIGPVFRNEK 119
            +   L         +L           P++ Y  +    D         R       + 
Sbjct: 109 EREYVLGPTHEEPFTELIKSEISSYKRLPISLYQIQSKYRDEQRPRFGLIRSREFIMQDG 168

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN-DYHIGINNRKILDGI 178
           +        +        ++         +     +   G+    D    +   +I + +
Sbjct: 169 YSFHADESSLDTTYRRYEAAYHAILQRCGLEYRAVIGDNGLMGGHDSKEFMALSQIGEEL 228

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS---- 234
           +            +    L    K  +  L+  +L +    +         ++LT     
Sbjct: 229 ICYSTESDYVANWKMATSLYVSKKSHETFLERAELQVDPSYSLEEVAAACESDLTKIVQS 288

Query: 235 ----EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE------------- 277
                  + ++  L  D + +  ++   ++          EL    +             
Sbjct: 289 FLLFADGEPVMILLRGDHQLNEAKVKNFLEADQLKIATPEELRCHLQTEAISPIELPENV 348

Query: 278 ------------LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA------------ILGF 313
                        V   G        ++ + R         +              +L F
Sbjct: 349 RLYADQHVQDLANVIVFGNQPGHYYQNANVGRDFSPLAFADFRLVQEGDPSPDGKGVLTF 408

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV--ALKSLES---- 367
               E       G+         +V     +     G        ++   ++   +    
Sbjct: 409 TRGIEVGHIFKLGTKYSERLGATVVDENGQETPVMMGCYGIGVSRLLSTIVEQHGNEEGI 468

Query: 368 -STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I      +I T   DS   +  +   Q +   G    +   + +  G +   AD 
Sbjct: 469 DWPKEIAPYDIHIIQTTMEDSYQTALCEEVEQAMLAVGYEVLVDDRNERA-GVKFADADL 527

Query: 427 RNCPLAIIQGTGERSRGMLQIK 448
             CP+ +  G    + G+++IK
Sbjct: 528 IGCPIRLTIGNK-ATEGIVEIK 548


>gi|193788250|dbj|BAG53144.1| unnamed protein product [Homo sapiens]
          Length = 619

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 61/228 (26%), Gaps = 15/228 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 241 FLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 299

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+                              +R        F    + ++    
Sbjct: 300 -ELFALKPMNCPG-------------HCLMFDHRPRSWRELPLRLADFGVLHRNELSGAL 345

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +                     I+          R +         L+   +  + L  +
Sbjct: 346 TGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDI 405

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
              D+ +K     +     +   ++      G  +  +  D +  +  
Sbjct: 406 EVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQ 453



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 470 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 529

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A   A++ L        +++ A        ++ G  E+  G + I+    
Sbjct: 530 AQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTINIRTRDN 589

Query: 453 ---GKEL-SREIKNNESWREARVAQIT 475
              G+   S  I+  +  +E R  Q  
Sbjct: 590 KVHGERTISETIERLQQLKEFRSKQAE 616


>gi|149409915|ref|XP_001508543.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 719

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + Y+  L          ++ +FS + + 
Sbjct: 341 FLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNI-YNSKLWLTSGHWQHYSENMFSFEVEK 399

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 400 -EIFALKPMNCPG 411



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 41/123 (33%), Gaps = 4/123 (3%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   Q    A +  ++ L     
Sbjct: 594 ERMIAILTENFGGKWPLWLSPRQVMVVPVGPTCDDYAQKVRQQFHDAQLMTDVDLDPGCT 653

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK---GKEL-SREIKNNESWREARVA 472
              +++ A        ++ G  E++ G + I+       G+   S  I+  +  +++R  
Sbjct: 654 LNKKIRNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTISETIERLQQLKQSRCK 713

Query: 473 QIT 475
           Q  
Sbjct: 714 QAE 716


>gi|74142262|dbj|BAE31895.1| unnamed protein product [Mus musculus]
          Length = 722

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 36/116 (31%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ + +        + P  +  +         
Sbjct: 573 TYVSHDGDDKKRPVIVHRAILGSVERMIAILTEKYGGKWPFWLSPRQVMVVPVGPTCDEY 632

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   Q    A   A+  L        +++ A        ++ G  E++ G + I+
Sbjct: 633 AQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIR 688



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + ++  L          ++ +FS + + 
Sbjct: 344 FLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNI-FNSRLWMTSGHWQHYSENMFSFEVEK 402

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 403 -EQFALKPMNCPG 414


>gi|73981325|ref|XP_850160.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 2
           [Canis familiaris]
          Length = 721

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +   + +F LQ   
Sbjct: 327 FLPRGTRVYNALVAFIRAEYTRRGFSEVKTPTL-FSAKLWELSGHWEHYQEDMFVLQPPG 385

Query: 78  GQWIS 82
              ++
Sbjct: 386 SDRLA 390



 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P  +  +   ++     +   Q L+ AG+  ++   S      +++ A   +  
Sbjct: 610 WPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDADSGLTLSRRVRRAQLAHYN 669

Query: 431 LAIIQGTGERSRGMLQIK---DLAKGK 454
              + G  E+S+  + I+   +   G+
Sbjct: 670 FQFVVGQKEQSKKTVNIRTRDNRQLGE 696


>gi|73981321|ref|XP_860741.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 4
           [Canis familiaris]
          Length = 695

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +   + +F LQ   
Sbjct: 327 FLPRGTRVYNALVAFIRAEYTRRGFSEVKTPTL-FSAKLWELSGHWEHYQEDMFVLQPPG 385

Query: 78  GQWIS 82
              ++
Sbjct: 386 SDRLA 390



 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P  +  +   ++     +   Q L+ AG+  ++   S      +++ A   +  
Sbjct: 584 WPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDADSGLTLSRRVRRAQLAHYN 643

Query: 431 LAIIQGTGERSRGMLQIK---DLAKGK 454
              + G  E+S+  + I+   +   G+
Sbjct: 644 FQFVVGQKEQSKKTVNIRTRDNRQLGE 670


>gi|261839095|gb|ACX98860.1| prolyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 577

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 8/118 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + LR  
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREI 460
           G+   +    ++ FG +++  +     LA+I G         + IK     K+  ++I
Sbjct: 508 GVDVLLDDRDAR-FGAKMRDFELIGERLALIIGKQTLENKEFECIKRANLEKQTLKDI 564



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|197103799|ref|YP_002129176.1| histidine-tRNA ligase [Phenylobacterium zucineum HLK1]
 gi|196477219|gb|ACG76747.1| histidine-tRNA ligase [Phenylobacterium zucineum HLK1]
          Length = 383

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 30  LDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTA 89
           L +IR   E  G    + PLL+  +       +  R    +F +Q + G    LR D T 
Sbjct: 12  LAAIRAPLEAAGATRADAPLLQPLNLFLDLAGEAMRAR--LFVVQAEGGAEACLRPDFTV 69

Query: 90  PLARYVAENFDTIVFPCR 107
            +AR   E+         
Sbjct: 70  AIARAHLESGRRDGRYLY 87


>gi|145511956|ref|XP_001441900.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409161|emb|CAK74503.1| unnamed protein product [Paramecium tetraurelia]
          Length = 609

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G A       +I N++++ IR  Y   G+  + TP L   + L K     D+  + 
Sbjct: 240 KLAPGSAFFLPHGTKIYNKLIEMIRKEYRERGYQEVITPQLFNKE-LWKQSGHLDKYAEN 298

Query: 70  VFSLQDDDGQWISLRYDLTAP 90
           ++   D     + L+      
Sbjct: 299 IYMTHDH---QMGLKPMNCPG 316



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/132 (9%), Positives = 41/132 (31%), Gaps = 18/132 (13%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ + + +      + P  +  +     S    +     L   G   E+     + 
Sbjct: 496 ERMMAILTEQYNGKWPFWLSPRQVMIIPVSEISKQYAKEIYDQLYKLGFEVELEDTE-QT 554

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            G +++  +  +    I  G  E+    + ++                  R       ++
Sbjct: 555 LGKRIRKGEMLHFNYIITVGAKEQESNTVDVR-----------------ERGDNHKHQSM 597

Query: 477 PISELVSTVKKI 488
            + E ++ + ++
Sbjct: 598 KLDEFITKINQL 609


>gi|147920334|ref|YP_685893.1| glycyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110621289|emb|CAJ36567.1| glycyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 577

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 2/92 (2%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +       S+     + L+ AG   E     S   G + +  D    P  +    
Sbjct: 473 VAVLPLLSKDPLASRAAEIARGLKAAGYFVE--YDESGTIGKRYRRNDEAGTPFCVTVDH 530

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                G + ++D     ++             
Sbjct: 531 QTIEDGTVTVRDRDSMAQIRYPADGLAGLISE 562



 Score = 37.5 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 17/49 (34%), Gaps = 1/49 (2%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
           GF D       ++ +I D+ R  Y    GF  IE P +          
Sbjct: 28 SGFYDYGPLGATLKRKIEDAWRRFYCVGEGFYEIEAPTIGVEAIFEASG 76


>gi|332265240|ref|XP_003281636.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           1 [Nomascus leucogenys]
          Length = 793

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/148 (10%), Positives = 40/148 (27%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 644 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPHQVMVIPVGPACEKY 703

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               +      G  A++ L  +     +++ A        ++ G  E+    + ++    
Sbjct: 704 ALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKVNNAVNVRTRDN 763

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  + +     +      T+   E
Sbjct: 764 KIHGEILVTSAIDKLKNLKKTRTLNAEE 791



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 415 FLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 473

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 474 D-TFALKPMNCPGHCLMFAHR 493


>gi|317476770|ref|ZP_07936013.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316906945|gb|EFV28656.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 646

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/461 (10%), Positives = 109/461 (23%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +  P                  NK ++ 
Sbjct: 261 KGLPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCP---------------PIGNKLLY- 304

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                  G   +  K          + +
Sbjct: 305 ------------------------------------ITSGHYAKYGKDSFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      + + +             R    G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCMIYKNSPRSYKDL-----------PLRLAEFGTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHFENFEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DENWEKAEQAIIEACEEKGLKAKVEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   + +              D    R    +    G    + R +  L    +    
Sbjct: 495 NLPERFQLEYTGA----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 541

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +          Q     L+   +RA +    ++  G +++  + +  P 
Sbjct: 542 LW-LTPDQVAILPISEKFNDYAQEVKDYLKRYDVRAIVD-ERNEKIGRKIRDNEMKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +I G  E     + ++   +G + + + +         V 
Sbjct: 600 MLIVGEKEAENREVSVRKQGEGDQGTMKFEEFAKKVNEEVQ 640


>gi|312795972|ref|YP_004028894.1| Threonyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167747|emb|CBW74750.1| Threonyl-tRNA synthetase (EC 6.1.1.3) [Burkholderia rhizoxinica HKI
           454]
          Length = 643

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 36/112 (32%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R      G+  ++TP++       +         + +F+ 
Sbjct: 269 GLVFWHPKGWALWQQVEQYLRRRLGEAGYLEVKTPMIMDRSLWERS-GHWQNYRENMFT- 326

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + + +  +++        +    +  +    P R    G   RNE  G   
Sbjct: 327 TESEKRDYAIKPMNCPGHVQVFNHSLHSYRDLPLRFAEFGSCHRNEASGALH 378


>gi|218133229|ref|ZP_03462033.1| hypothetical protein BACPEC_01093 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992102|gb|EEC58106.1| hypothetical protein BACPEC_01093 [Bacteroides pectinophilus ATCC
           43243]
          Length = 462

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/227 (7%), Positives = 59/227 (25%), Gaps = 8/227 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  +         +      ++ +   +   +     ++       +    +        
Sbjct: 237 EWFNYWRSYCINWLKSLGMKDDEMRARDHSPEELCFYSKGTTDIEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +       S       +  +      ++ A   ++         + +    
Sbjct: 297 RTDYDLTQHQNVSGEDMSYFDDESKEKYIPYVIEPSLGADRVTLAFLCSAYDEEEIGEGD 356

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + PV I  +          +     L +     E       N G + +  
Sbjct: 357 VRTVLHFHPALAPVKIGILPLSKKLNEGAEKIYAEL-SKKYNCEFD--DRGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           D    P  I       + G + ++D    ++   +I++ +++ E + 
Sbjct: 414 DEIGTPFCITYDFDSETDGAVTVRDRDTMQQERIKIEDLKAYFEDKF 460


>gi|210617161|ref|ZP_03291428.1| hypothetical protein CLONEX_03650 [Clostridium nexile DSM 1787]
 gi|210149436|gb|EEA80445.1| hypothetical protein CLONEX_03650 [Clostridium nexile DSM 1787]
          Length = 476

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/228 (7%), Positives = 59/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     +       E +   +   +     ++       +    +        
Sbjct: 251 EWFAYWKQFCLDWLKSLGIKEEEIKARDHSAEELCFYSKATTDVEFLFPFGWGELWGIAD 310

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   ++      +     + +  +      ++ A    +         + LE   
Sbjct: 311 RTDYDLTQHQEVSKQDMTYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGD 370

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P+ I  +          +     L +     E       N G + +  
Sbjct: 371 VRTVLHFHPALAPIKIGVLPLSKKLNEGAEKVFAQL-SKYYNCEFD--DRGNIGKRYRRQ 427

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  I         G + ++D    ++   +I++ +++ E +  
Sbjct: 428 DEIGTPFCITYDFESEEDGAVTVRDRDTMEQERVKIEDLKTYFEKKFE 475


>gi|253580799|ref|ZP_04858062.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847869|gb|EES75836.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 475

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 32/97 (32%), Gaps = 3/97 (3%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV I  +          +   Q L +     E       N G + +  D    
Sbjct: 379 HFHPALAPVKIGVLPLSKKLNEGAEKIYQQL-SKKYNCE--YDDRGNIGKRYRRQDEIGT 435

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           P  +       + G + I+D    +++  +I   +++
Sbjct: 436 PFCVTYDFESENDGAVTIRDRDTMEQVRVKIDELDAY 472


>gi|168027962|ref|XP_001766498.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682407|gb|EDQ68826.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 615

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 38/103 (36%), Gaps = 2/103 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    + +   +     L+   IRAE+  G     G  ++ A+ +  P+  
Sbjct: 514 WLAPVQARLLPVTDNEVDYCKKVVAELKAREIRAEVIFGER--LGKLIRNAETQKIPVMA 571

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E     L ++    G+  +  + +     +  ++   +
Sbjct: 572 VVGRKEVETETLTVRTRHGGELGNVTVADLADRIQLAISTRGV 614



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR+ I D  + ++   G++ + TP +   D L K     D   + +F  
Sbjct: 239 GLVFWHPKGAMIRHIIEDYWKKMHFANGYELLYTPHIAKLD-LWKTSGHYDFYKENMFDQ 297

Query: 74  QDDDGQWISLRYDLTA 89
              + +   +R     
Sbjct: 298 MQIEEELYQIRPMNCP 313


>gi|157825427|ref|YP_001493147.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166225491|sp|A8GML4|SYT_RICAH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157799385|gb|ABV74639.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 635

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 35/103 (33%), Gaps = 1/103 (0%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + P+ +      SD         + L   G+R ++ +   K    +++    +  
Sbjct: 531 CFPLWLAPIQVAIATITSDLNDYALEVQKALIDNGVRTDINISPDK-INYKIREFYNQKI 589

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P+  + G  E+    + I+ L   ++    ++   +  +    
Sbjct: 590 PMIAVIGKQEQENKQVTIRRLRTTEQEVLSLEQLITLIKEENE 632



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +     ++    +F+L
Sbjct: 261 GMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK-SLWEASGHWEKFRDDMFAL 319

Query: 74  QDDDGQWISLRYDLTA 89
            D D + ++L+     
Sbjct: 320 -DTDDKTLALKPMNCP 334


>gi|289423700|ref|ZP_06425499.1| proline--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289155950|gb|EFD04616.1| proline--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 481

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 41/128 (32%), Gaps = 18/128 (14%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              +     ++I    +    +         L+  GI  E+    + + G +   A+ + 
Sbjct: 287 PPKMAPTQVIIIPIAANKGGVMEVVDKVAADLKAKGISVEVDDRDNYSPGYKFNDAEMKG 346

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            P+ +  G  +  +                      ++R   + +  + +  +V  V  +
Sbjct: 347 IPVRLEIGPKDIEKNQA------------------LAFRRDELTKSEMSLDTVVDDVAAL 388

Query: 489 LQENKEEI 496
           L E ++ +
Sbjct: 389 LDEIQKNM 396


>gi|255323744|ref|ZP_05364872.1| glycine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255299234|gb|EET78523.1| glycine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 459

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/93 (9%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +    +     +     LR      +  +  +   G + +  D    P  +    
Sbjct: 366 VAVLPLSKKEELSEPARKLADKLRAH-WNVDFDVSGA--IGRRYRRQDEIGTPFCVTFDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    ++   ++ + E++  AR
Sbjct: 423 DTLEDDAVTVRERDTMEQERVKLDDLEAYLAAR 455


>gi|254282289|ref|ZP_04957257.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678492|gb|EED34841.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 643

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 46/175 (26%), Gaps = 9/175 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   I   +R     YG++ I+TP L       +     D+   G+F L
Sbjct: 261 GMVFWHPAGWVIYQTIERYMREQQLAYGYEEIKTPQLVDYSLWQRS-GHADKFADGMFML 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +  D +  +++             +        ++YR  P+   E     R         
Sbjct: 320 K-SDERDFAVKPMNCP-------CHIQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
                     DA +          VG   +  H    +    + I          
Sbjct: 372 IMRVRGFVQDDAHIFCTEDQIQGEVGDFIDMLHDVYADFGFSEVIYRLSTRPEQR 426



 Score = 43.7 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  +     V++   D  +D         + L+  G RA   L  ++  G +++  
Sbjct: 529 EGEFPTWLSPQQAVIVNITDKHAD---YALSVQETLKNNGFRAVCDL-RNEKIGFKIREL 584

Query: 425 DRRNCPLAIIQGTGERSRGMLQIK 448
           + +  P  I+ G  E     + ++
Sbjct: 585 EMKKTPYIIVVGDQEVESATVSVR 608


>gi|193076888|gb|ABO11608.2| ATP phosphoribosyltransferase [Acinetobacter baumannii ATCC 17978]
          Length = 318

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 67/356 (18%), Positives = 121/356 (33%), Gaps = 59/356 (16%)

Query: 77  DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
            G+ + +R D+T  +AR  A +   +    R    G V   +       R  +Q   +  
Sbjct: 6   SGRLLGIRADMTPQVARIDA-HVRPVEGVARYCYAGTVLHTKPQNFNATRAPLQLGAELY 64

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
           G  +  AD EM  +M   +E     +   H+ + +  +   +++  GL  +++     + 
Sbjct: 65  GHDSIEADVEMVDVMLGLIENAYTLQG-AHLDLGHVGLFRSLVKYAGLSKNEEHELSDLY 123

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELY 256
            R          + +  L    +  N G         +  +D + + LS D+ K      
Sbjct: 124 QR----------KALPELAEFTQNLNMGSDFYALGRYASDLDALQAHLSADILKDTEFDA 173

Query: 257 ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVM 316
            L           N L    E ++   + +  + I    +R   Y+TG +Y         
Sbjct: 174 AL-----------NALKTTLEQIKNR-WPALNVGIDVVELRSYHYHTGLMYAVYAPNRAA 221

Query: 317 NEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG 376
                      +  GGRYDG+   F  +  PATGFS         L +L +   N     
Sbjct: 222 ----------PLAQGGRYDGIGEHFG-RARPATGFSCD-------LYALGA---NQFAEI 260

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             ++     ++D L          R+ G+R    LG+           D  + P A
Sbjct: 261 ETVVAPKGTEADLLKA---IANA-RSEGLRVVQLLGND----------DLSSIPYA 302


>gi|13358098|ref|NP_078372.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761869|ref|YP_001752619.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920446|ref|ZP_02690665.2| threonyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508529|ref|ZP_02958053.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701866|ref|ZP_02971526.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|13959578|sp|Q9PPV6|SYT_UREPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189083629|sp|B1AJH5|SYT_UREP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|11271125|pir||H82878 threonyl-tRNA synthetase UU534 [imported] - Ureaplasma urealyticum
 gi|6899538|gb|AAF30947.1|AE002152_6 threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827446|gb|ACA32708.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902899|gb|EDT49188.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675966|gb|EDT87871.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701170|gb|EDU19452.1| threonyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 580

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 86/288 (29%), Gaps = 8/288 (2%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +L+E  I+ R        G + V+ ++ E              + +    ++        
Sbjct: 292 RLSEHSILHRYESSGGLTGFERVREMILEDCHVFCRFDQIEHEVIN-AFKMIQEAQEGLG 350

Query: 249 EKSMHELYELVKGTIAGEKGFN-ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            K+      L       +   + ++   S+ V +     + I     +     Y     +
Sbjct: 351 IKTFEIHLSLNDPNDKEKYYDDPQMWEQSQNVLRKMLKDHNIPYKEMVGEAAFYGPKIDF 410

Query: 308 EA--ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           +   +L   +     +            Y    +      +   G      RL+  L   
Sbjct: 411 QVKTVLNRIITVSTIQLDFLLPNRFNLTYINESNEQSVPVMIHIGIIGTYERLLAILLEQ 470

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ-MLRTAGIRAEMFLGSSKNFGNQLKYA 424
                 +  + P+ +  +  + +  + Y       LR   IR+ + L + +    +++ A
Sbjct: 471 TKGILPLW-LSPIQVVIIPVNENLHTDYVKELNIKLRKHLIRSNVDLRNER-LSKKIREA 528

Query: 425 DRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREARV 471
             +  P  I+ G  E      +  +     K  +  I +  +  E ++
Sbjct: 529 QIQKIPYQIVIGDEEIKNNKMVTYRCYGSEKTTTVSITDFINMLENKI 576



 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 56/209 (26%), Gaps = 15/209 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I+N++   I  +   + FD + TP+L   D   K     D     +FS 
Sbjct: 199 GLPIWLPNGTIIKNQVQKFINEVEFQFNFDTVITPILGSIDLY-KTSGHWDHYKDNIFSP 257

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D + + LR  +T P       +        R+YR  P+  +E     R+        
Sbjct: 258 VQIDNEILVLRP-MTCP------HHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLTG 310

Query: 134 DNVGSSAETADAEMCMMMADTLEA-VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                     D  +           +   +               I   +    D +   
Sbjct: 311 FERVREMILEDCHVFCRFDQIEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPNDKEKYY 370

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
               +       +     ++ +L +    
Sbjct: 371 DDPQMW------EQSQNVLRKMLKDHNIP 393


>gi|238919782|ref|YP_002933297.1| threonyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259516479|sp|C5B846|SYT_EDWI9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238869351|gb|ACR69062.1| threonyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 642

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 89/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEIWDRAEEDLAAALQENGIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYVGENNERVVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+         +  ++ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQAVVMNITDSQAEYVEELSKKLQAAGIRVKSDL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++           I +     +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGVMSIDDVIKKLQQEI 632



 Score = 38.3 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/197 (7%), Positives = 50/197 (25%), Gaps = 11/197 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKL 203
           + ++    I  RA + L
Sbjct: 425 EKRIGSDEIWDRAEEDL 441


>gi|311741374|ref|ZP_07715198.1| glycyl-tRNA synthetase beta subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303544|gb|EFQ79623.1| glycyl-tRNA synthetase beta subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 459

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/93 (9%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +    +     +     LR      +  +  +   G + +  D    P  +    
Sbjct: 366 VAVLPLSKKEELSEPARKLADKLRAH-WNVDFDVSGA--IGRRYRRQDEIGTPFCVTFDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    ++   ++ + E++  AR
Sbjct: 423 DTLEDDAVTVRERDTMEQERVKLDDLEAYLAAR 455


>gi|196008377|ref|XP_002114054.1| hypothetical protein TRIADDRAFT_58133 [Trichoplax adhaerens]
 gi|190583073|gb|EDV23144.1| hypothetical protein TRIADDRAFT_58133 [Trichoplax adhaerens]
          Length = 473

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           L+   P G        +R   +++  +       G   + TP L  +D L +     D  
Sbjct: 63  LKQSRP-GLYYILPVALRAMYKLIKVVDEEMTRIGGSKLGTPCLIPAD-LWQSSGRWDTL 120

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F L+D   +   L  
Sbjct: 121 GAEMFKLKDRHNRHYCLGP 139


>gi|47222174|emb|CAG11600.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 483

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +    P G        +R   +++  I    +  G   ++ P L  ++ L K  
Sbjct: 81  MQQAGLIHPSNP-GCYYYLPATVRSVEKLIRVIDQEMQEIGGQKLDMPSLCSAE-LWKAS 138

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D   K +  L+D  G    L  
Sbjct: 139 ERWDLMGKELLRLKDRHGGDYCLAP 163



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 29/106 (27%), Gaps = 10/106 (9%)

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML----- 400
               G +  ++  I  + + E            +          + K  +  + L     
Sbjct: 347 CFGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQVCVVPPKKGSKVDKATIIAEELVQTLT 406

Query: 401 ----RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
               R  G    +   +    G +LK A +   P  ++ G G    
Sbjct: 407 VTLPRLRG-EVVLDDRTQMTIGRRLKDASKLGYPYVVVVGQGALEE 451


>gi|290769989|gb|ADD61756.1| putative protein [uncultured organism]
          Length = 462

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/227 (7%), Positives = 57/227 (25%), Gaps = 8/227 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     +       + +   +   +     ++       +    +        
Sbjct: 237 EWFTYWRQYCIDWLKALGMKEDEMRARDHSPEELCFYSKGTTDIEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +       S       +  +      ++ A   ++         + LE   
Sbjct: 297 RTDYDLTQHQTVSGEDMSYFDDEAKEKYIPYVIEPSLGADRVTLAFLCSAYDEEELEGGD 356

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + PV I  +          +     L +     E       N G + +  
Sbjct: 357 VRTVLHFHPALAPVKIGILPLSKKLNEGAEKVYAEL-SKYYNCEFD--DRGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           D    P  I         G + ++D    ++   +I + +++ E + 
Sbjct: 414 DEIGTPFCITYDFDSEEDGAVTVRDRDTMQQERIKIADLKAYFEDKF 460


>gi|303237443|ref|ZP_07324009.1| proline--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482393|gb|EFL45422.1| proline--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 493

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 73/255 (28%), Gaps = 31/255 (12%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+  +E    L V ++   +         + S   R          EA+
Sbjct: 173 WQEGHTAHATREEAVDEAKTMLKVYADFAEQWLAIPVVQGVKSENERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           +++               +RL+ AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGVSTRLVGALIMTHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +   ++ L+    K Q     LR  GI  +     +K  G + 
Sbjct: 293 GLVLPPKIAPIQVVIVPIFKGAEQLAAITEKLQPVINELRAKGISVKFDNADNKRPGFKF 352

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + +  P+ +  G  +     ++I                   R   + +  +    +
Sbjct: 353 AEYELKGVPVRLAMGGRDLENNTIEI------------------MRRDTLEKENVSFDGI 394

Query: 482 VSTVKKILQENKEEI 496
           V  ++K+L+E +E I
Sbjct: 395 VERIEKLLEEIQENI 409


>gi|294673774|ref|YP_003574390.1| proline--tRNA ligase [Prevotella ruminicola 23]
 gi|294473292|gb|ADE82681.1| proline--tRNA ligase [Prevotella ruminicola 23]
          Length = 493

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 19/135 (14%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + + +         + LR  GI  +     +K  G   
Sbjct: 293 GLVLPPRLAPIQVVIIPIATKPEQMEQVNKEVTPIIEALRAKGITVKFDDADNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+AD   +  P+ ++ G  +   G +++      ++ +R I     +           + 
Sbjct: 351 KFADYELKGVPVRLVLGARDLENGTIEVMRRDTLEKETRSIDGITEY-----------VE 399

Query: 480 ELVSTVKKILQENKE 494
           +L+  ++K + E  +
Sbjct: 400 QLLEDIQKNIFEKAK 414


>gi|262281159|ref|ZP_06058941.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257390|gb|EEY76126.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 571

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 44/160 (27%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + SL +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPA-SLWEESGRYEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D       L     ++   +AR   +++  +          +R     R   
Sbjct: 90  GPELLRFKDRHANPFVLGPTHEEVITDMARNELKSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLG 189


>gi|168334910|ref|ZP_02693030.1| prolyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 570

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 66/555 (11%), Positives = 147/555 (26%), Gaps = 103/555 (18%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
               +    N I   IR          +  P++   + L +     +     +  ++D  
Sbjct: 43  LLPAQKVKVN-IEKIIREEMNKIDGQEVIFPVVLPGE-LWQESGRFESVGSELLRMKDRT 100

Query: 78  GQWISLRYDLT-----APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP----GRFRQF 128
            + + L   +T       LAR  A+++    F     +          G       F   
Sbjct: 101 DKDLVLG--MTHEEAAVHLARSEAKSYTQYPFMIYQIQTKFRDEARSRGGLIRVREFTMK 158

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVG-----IKRNDYHIGINNRKILDGILEKIG 183
                       +    +      +     G        +D  +   N      +L  IG
Sbjct: 159 DAYSFHTSNEDLDAYYDKCLKAYNEIYRRTGVPEVVCVESDSGMMGGNVSHEFMLLADIG 218

Query: 184 LH---GDDKLNERLIVLRAIDKLDKFGLQGVKLL-LGEGRTDNSGDFTKGANLTSE---- 235
                  D       +  A  KL     +   +  +   + +   D  K   ++ E    
Sbjct: 219 EDTIVVCDSCGYMSNMEVATGKLAAVMKEEKAIEKIHTPKMNTIADIAKYFGVSEEHTLK 278

Query: 236 --------QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
                   + + +V F+  DL+ ++ ++ ++VK  I   + +    +    +     N++
Sbjct: 279 AAVYNVQDKSEPLVIFIRGDLQVNIAKVQKIVKAAITPYEDYENCDLAFGFIGPYKMNTD 338

Query: 288 RIKI-------------------SSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
           ++ +                                   E +    V   +  P   G +
Sbjct: 339 KVTVIYDKSLKDETNLICGGNEADYHYSGLNMNRDLSAIEYVDVAEVKEGQCCPNCNGKL 398

Query: 329 G------------GGGRYDGLVSRFKGQN----VPATGFSIGISRLIVALKSLESSTNNI 372
                         G +Y  ++                   GI    +   ++E+  ++ 
Sbjct: 399 TFKRGIEVGNIFKLGTKYTDVMKMTYVDQDGKSKTPIMGCYGIGVGRLIASAIEAHHDDY 458

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF-----------LGSSKNFGNQL 421
             + P+ I        +L    M         I AE++                  G Q 
Sbjct: 459 GPIWPISIAPWQVHICALKSKTMDINA-----IGAEIYGKLSQEFEVIFDDRGAAPGVQF 513

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
             AD    P+ I+ G      G ++I                      +  +  I   ++
Sbjct: 514 ADADLLGVPVRIVLGEKNLKNGNVEI------------------VTRDKSIKKLIAKEDV 555

Query: 482 VSTVKKILQENKEEI 496
              V  I++E ++ +
Sbjct: 556 YEEVAAIIRELQQRL 570


>gi|145534943|ref|XP_001453210.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420921|emb|CAK85813.1| unnamed protein product [Paramecium tetraurelia]
          Length = 609

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G A       +I N++++ IR  Y   G+  + TP L + D L K     D+  + 
Sbjct: 240 KLAPGSAFFLPHGTKIYNKLVEMIRKEYRERGYQEVITPQLFHKD-LWKQSGHLDKYAEN 298

Query: 70  VFSLQDDDGQWISLRYDLTAP 90
           ++   D     + L+      
Sbjct: 299 IYMTHDH---QMGLKPMNCPG 316



 Score = 40.6 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ + + +      + P  +  +     S    +     L   G   E+   S + 
Sbjct: 496 ERMMAILTEQYNGRWPFWLSPRQVLIIPVSEVSKQYAKEIYDQLYKLGFEVELE-DSEQT 554

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            G +++  +  +    +  G  E+    + ++
Sbjct: 555 LGKRIRKGEMLHFNYILTLGAKEQESNTVDVR 586


>gi|315124065|ref|YP_004066069.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017787|gb|ADT65880.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 508

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 34  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 88

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 89  FGKELLRFKDRKENEFVLGP 108


>gi|294660421|ref|NP_853173.2| glycyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286863|sp|Q7NB88|SYG_MYCGA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|284812080|gb|AAP56741.2| glycyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930655|gb|ADC30594.1| glycyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 463

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 25/72 (34%), Gaps = 2/72 (2%)

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            A +R      S+ + G + +  D       +        +G++ I++    +++   I 
Sbjct: 394 DANLR--FDFDSAGSIGKRYRRYDAIGAKYCLTYDFDSLEKGIVTIRERDSMEQIKIPIS 451

Query: 462 NNESWREARVAQ 473
               W    + +
Sbjct: 452 ELRQWIRNNLHE 463


>gi|226941673|ref|YP_002796747.1| threonyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254783525|sp|C1DDA6|SYT_LARHH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226716600|gb|ACO75738.1| Syt [Laribacter hongkongensis HLHK9]
          Length = 633

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/393 (10%), Positives = 108/393 (27%), Gaps = 32/393 (8%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +         +++        +   +    +    M  D +     +
Sbjct: 266 HPKGWTLWQQVEQYMRRVLIANDYQEVRT---PQIVDRSLWEKSGHWAMYQDLMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY +   N      I  +      D                   L G+ + +     D
Sbjct: 323 KRDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGI-MRVRNFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F   A +  E    +    ++  +     +   +        G +EL   +E    
Sbjct: 382 DAHIFCTEAQMQPETAAFIDLLQAVYQDFGFDNILIKLSTRPEKRVGADELWDQAEAALA 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDG 336
           +   +  +        G  Y     +        +    +              G  Y  
Sbjct: 442 AALAAKGLAYELQPGEGAFYGPKIEFSL---KDCLGRVWQCGTLQLDFNLPVRLGAEYVS 498

Query: 337 LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
             +  K   +        + R I  L    +    +  + PV +  ++            
Sbjct: 499 EDNAKKHPVMLHRAILGSLERFIGILIEHHAGAMPLW-LAPVQMAVLNITEAQAEYATEV 557

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + L+  G R ++ L  ++    +++    +  P  II G  E++  ++ ++    G++L
Sbjct: 558 AETLKKQGFRVDLDL-RNEKISYKIREHSLQKLPYQIIVGDKEKAGALVAVRA-RTGEDL 615

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKIL 489
                              IP+S+ +  +K  L
Sbjct: 616 -----------------GQIPLSQFIERLKSEL 631



 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 7/76 (9%), Positives = 23/76 (30%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R +     +  + TP +       K           +F+ 
Sbjct: 261 GMVFWHPKGWTLWQQVEQYMRRVLIANDYQEVRTPQIVDRSLWEKS-GHWAMYQDLMFT- 318

Query: 74  QDDDGQWISLRYDLTA 89
            + + +  +++     
Sbjct: 319 TESEKRDYAVKPMNCP 334


>gi|171463692|ref|YP_001797805.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238689063|sp|B1XV14|SYT_POLNS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|171193230|gb|ACB44191.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 640

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 37/112 (33%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R +Y+  G+  ++ P +     L +     +   + +F+ 
Sbjct: 261 GLIFWHPKGWSIWQEVEQYMRRVYQQEGYQEVKAPQI-LDRGLWEKSGHWENYKENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + + +  +L+        +       +    P R    G   RNE  G   
Sbjct: 319 TESENRAYALKPMNCPGHVQIYNSGLHSYRELPLRFGEFGQCHRNEPSGALH 370


>gi|281211698|gb|EFA85860.1| threonyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 730

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 37/130 (28%), Gaps = 6/130 (4%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD-----SLSKYQMYTQMLR 401
               F      + + ++  +           + I  +  +SD              Q L 
Sbjct: 598 HRAIFGSTERMMAILIEHTKGKWPLWLSPRQIFIAPVSVNSDGSGGPYNDYLNAVKQRLF 657

Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
            AG   +  L S K    +L+ A        ++ G  E+    + I+      +++  + 
Sbjct: 658 DAGYHIDSDL-SDKTINKKLREAITLRYNYLVVIGKEEQDNNTITIRRRDSTDQITLTLD 716

Query: 462 NNESWREARV 471
                    +
Sbjct: 717 KFLEELNDNI 726



 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 4/86 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ-DD 76
                 RI N++   +R+ Y   GF+ + TP + YS  L +           +F  Q D 
Sbjct: 354 FLPHGTRIYNKLHSFLRSEYRKRGFEEVITPNI-YSQKLWETSGHWQNYKDNMFGFQCDH 412

Query: 77  DGQWISLRYDLTAPLARYVAENFDTI 102
                SL+           A    + 
Sbjct: 413 --TSYSLKPMNCPGHCLMFAHKSHSY 436


>gi|47226601|emb|CAG08617.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 677

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + +P + Y+  L +        ++ +FS +  +
Sbjct: 336 FLPKGAFIYNTLIEFIRSEYRRRGFQEVVSPNI-YNSKLWQTSGHWQHYSENMFSFE-SE 393

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 394 KETFALKPMNCPG 406


>gi|325282970|ref|YP_004255511.1| Prolyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314779|gb|ADY25894.1| Prolyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 505

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 7/114 (6%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       V+I  +    D    + + +     L   GIR ++         N  K
Sbjct: 299 GLMLPPNIAPIQVVIVPVGRKEDFARMVEEARTLAAELEREGIRVKVDDREG--LTNGFK 356

Query: 423 YAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           Y D   +  P+ I  G  +   G L +K+     + +    +  S  +AR+  I
Sbjct: 357 YNDWELKGVPVRIELGPRDLEAGQLVVKNRTSEDKETLGRVDAVSSMDARLDGI 410


>gi|297184115|gb|ADI20234.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 501

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 41/130 (31%), Gaps = 19/130 (14%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ----MLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L       +     LR  GI  +     +   G + 
Sbjct: 300 GLVLPPKLAPYQVVIVPIYKGQEQLDAISEVAEDLMGQLRAQGITVKYDNRDTHKPGWKF 359

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI--PIS 479
              + +  PL I  G  +  +G +++                ++  +  V Q  +   + 
Sbjct: 360 NQYELQGIPLRIAIGPKDLEKGSVEL-------------ARRDTLTKQFVDQKEVSTKVP 406

Query: 480 ELVSTVKKIL 489
           EL+  +++ L
Sbjct: 407 ELLDEIQRTL 416


>gi|301779664|ref|XP_002925249.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Ailuropoda melanoleuca]
          Length = 890

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 40/148 (27%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K   V      +G    ++A+ S          + P  +  +         
Sbjct: 741 TYVSKDGDDKRNPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 800

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               +      G  A++ L  S     +++ A        ++ G  E++   + ++    
Sbjct: 801 ALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNVRTRDN 860

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  + +     +      T+   E
Sbjct: 861 KIHGEISVTSAIDKLKNLKKSCTLNAEE 888



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + Y+  L +        ++ +F+  D +
Sbjct: 512 FLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNM-YNSRLWETSGHWQHYSENMFTF-DIE 569

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 570 KDTFALKPMNCPGHCLIFAHR 590


>gi|237752912|ref|ZP_04583392.1| threonyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375179|gb|EEO25270.1| threonyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 605

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/264 (9%), Positives = 80/264 (30%), Gaps = 11/264 (4%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           E   D++  F + + + SE ++ ++ F    +          +        G  E+   +
Sbjct: 347 EFTQDDAHIFCRPSQIASE-VESIIDFTQKIMNAFGFSYEMEISTKPEKSIGSEEVWEEA 405

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----G 331
               K       I        G  Y      +       +  K +               
Sbjct: 406 TQALKGALERCGIAYKIDEGGGAFYGPKIDIKIT---DAIGRKWQCGTVQIDMNLPERFA 462

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
             Y    +  +   +          R +  L            + P  +  +       +
Sbjct: 463 LTYTDENNSTQQPVMIHRAILGSFERFVAILTEHFGGEFPFF-VAPTQVIIIPISEAQYN 521

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +     L   G+ AE+    ++    +++ A+++  P+  + G  E+   ++ ++D  
Sbjct: 522 YAKELHNALLKVGVYAEIE-NKNETLNKRIRNAEKQRVPMIAVLGAKEKEERLVAVRDRR 580

Query: 452 KGKELSREIKNNESWREARVAQIT 475
             ++ +   ++  +  + ++ +++
Sbjct: 581 LKEQSNMSFESFITLTKEKMREVS 604



 Score = 40.6 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 9/97 (9%), Positives = 28/97 (28%), Gaps = 2/97 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+R  + + +       G++P+  P +    ++ K         + ++  
Sbjct: 231 GLPIWLPKGARLRRNLENLLTQALIERGYEPVRGPEI-LKSAVWKTSGHYANYGENMY-F 288

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
              D     ++        +    +  +       + 
Sbjct: 289 TTIDEVEYGIKPMNCVGHIKVYQNSLHSYRELPLRFY 325


>gi|218458544|ref|ZP_03498635.1| ATP phosphoribosyltransferase regulatory subunit [Rhizobium etli
          Kim 5]
          Length = 166

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 33 IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
          + + ++    + I+TP+++ ++       ++ R  + +F  + + G  + LR + T P+ 
Sbjct: 13 LLSEFDARKAERIDTPVIQPAEPFLDIAGEDLR--RRIFMTESETGASLCLRPEFTIPVC 70


>gi|190890529|ref|YP_001977071.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
          protein [Rhizobium etli CIAT 652]
 gi|229464982|sp|B3PRB0|HISZ_RHIE6 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|190695808|gb|ACE89893.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
          protein [Rhizobium etli CIAT 652]
          Length = 373

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 33 IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
          + + ++    + I+TP+++ ++       ++ R  + +F  + + G  + LR + T P+ 
Sbjct: 13 LLSEFDARKAERIDTPVIQPAEPFLDIAGEDLR--RRIFMTESETGASLCLRPEFTIPVC 70


>gi|307179779|gb|EFN67969.1| Probable prolyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 422

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   ++     G        +R+ N++++ +     N G + I  P L  S SL K  
Sbjct: 28  MIKYGIIKPCNV-GMYALLPLGMRVLNKLINLVDKEMTNLGAEKILLPAL-TSTSLWKKT 85

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +F+++D   +   L  
Sbjct: 86  NRYDSNKNELFTIKDRHEKEYILSP 110


>gi|294496278|ref|YP_003542771.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase
           [Methanohalophilus mahii DSM 5219]
 gi|292667277|gb|ADE37126.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase
           [Methanohalophilus mahii DSM 5219]
          Length = 631

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/226 (9%), Positives = 61/226 (26%), Gaps = 29/226 (12%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               + +       N+  +     +   Y+    +E      +        V   V    
Sbjct: 401 EENKDFITALAKKVNKPVLVEMWEKRFFYFVL-KFEFNFVDALKKASALSTVQIDVENAE 459

Query: 333 RYD-----GLVSRFKGQNVPATGFSIGISRLIVALKSL------ESSTNNIKEMGPVLIT 381
           RYD           +   +  +        +   L+                 + P  + 
Sbjct: 460 RYDIKYIDQAGEAKRPVVLHCSPSGAIERCIYSLLEKASMKAEGGEVPMLPVWLSPTQVR 519

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +      +   +     ++    R ++     +  G +++ A +   P  ++ G  E  
Sbjct: 520 VIPIAERHMEFAEEVASRIQ---CRVDIDDRE-ETVGKKIRNAGQEWVPYVVVVGDREAE 575

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
            G + +                E  +  + +++ + + EL S + K
Sbjct: 576 SGKVNV-------------TVREESKPKKPSKVEMSVDELNSRILK 608


>gi|255731874|ref|XP_002550861.1| hypothetical protein CTRG_05159 [Candida tropicalis MYA-3404]
 gi|240131870|gb|EER31429.1| hypothetical protein CTRG_05159 [Candida tropicalis MYA-3404]
          Length = 684

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 18/104 (17%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   + L+ AGIRA        N G +    + +  PL +  G  + +   + +     
Sbjct: 495 AQKIEKTLQDAGIRATGDYREIYNPGWKFADWELKGVPLRLEFGPKDLAGNQVTV----- 549

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                         R     + T+ + EL + + KIL +   ++
Sbjct: 550 -------------VRRNDGKKYTVKLDELQTEIPKILDDMHNDL 580


>gi|195441810|ref|XP_002068665.1| GK18335 [Drosophila willistoni]
 gi|298206800|ref|YP_003714979.1| prolyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849432|gb|EAP87300.1| prolyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|194164750|gb|EDW79651.1| GK18335 [Drosophila willistoni]
          Length = 492

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 74/264 (28%), Gaps = 33/264 (12%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E +  T      + E V     +          +  +  V     
Sbjct: 168 EFLWQEGHTAHATREEALAETEQMNNIYAEFVENFMAIPVIKGAKTESERFAGAVETY-- 225

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G            S+   Q           +RL+ A
Sbjct: 226 ----CIEALMQDGKALQAGTSHFLGQNFAEAFDVKFTSKEGKQEYVWASSWGVSTRLMGA 281

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +  + +       + ++ T+ LR  GI  +    
Sbjct: 282 LIMTHSDDKGLVLPPNLAPIQVVIVPIYRNDEQFNAISEEAKLLTEELRAVGISVKFDGR 341

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +   G +    + +  PL I  G  +   G +++                   R   + 
Sbjct: 342 DTHKPGWKFAQYELQGVPLRIAIGPKDLENGTVEL------------------ARRDTLT 383

Query: 473 QITIPISELVSTVKKILQENKEEI 496
           +  +   ++V+  K ++ E ++ +
Sbjct: 384 KEFVKREDVVAKAKGLMTEIQDTL 407


>gi|319776351|ref|YP_004138839.1| threonyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123506|ref|ZP_08252070.1| threonine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317450942|emb|CBY87169.1| threonyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471088|gb|EGF16543.1| threonine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 643

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 99/366 (27%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEGGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L   G+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRNRE 636

Query: 479 SELVST 484
            +L++ 
Sbjct: 637 LKLLNE 642



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|195054655|ref|XP_001994240.1| GH23578 [Drosophila grimshawi]
 gi|193896110|gb|EDV94976.1| GH23578 [Drosophila grimshawi]
          Length = 1706

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/146 (10%), Positives = 46/146 (31%), Gaps = 13/146 (8%)

Query: 348  ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--------HDSDSLSKYQMYTQM 399
                      ++V   +              ++              +  L   +   + 
Sbjct: 1466 GITTRTIGVMIMVHADNQGLVLPPHVACTQAIVVPCGITVNTKDEERAQLLGACKEIVKN 1525

Query: 400  LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSR 458
            L  AG+R E     + + G +  + + +  P+ I  G  +      + ++    G++++ 
Sbjct: 1526 LSRAGVRCEGDYRDNYSPGWKFNHWELKGVPIRIELGPKDMQAKQIVAVR-RDTGEKMTI 1584

Query: 459  EIKNNESWREA---RVAQITIPISEL 481
             + + E    A    + Q  +  ++L
Sbjct: 1585 ALDDVEKKIPALLETIHQSMLAKAQL 1610


>gi|189183871|ref|YP_001937656.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|238692247|sp|B3CSS5|SYT_ORITI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|189180642|dbj|BAG40422.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 648

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/373 (14%), Positives = 107/373 (28%), Gaps = 40/373 (10%)

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
                +  + ++  + ++A   D  +     +T  A+ +K  +    I        I   
Sbjct: 306 KSGHWEKFRENMFTLDTNAAEQDHNLIKDSIETKCALALKPMNCPGHIQ-------IFNY 358

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D                   L G+ + +     D++  F     +T E I    
Sbjct: 359 TIKSYRDLPLRMAEFGSCHRYEPSGALYGL-MRVRSFVQDDAHIFCTEDQITDETIKFCH 417

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
               +  +    E+            G +   +  +  +   +    +    TI RG   
Sbjct: 418 LLKQVYQDFGFPEVKIKFSDRPEKRAGTD--KIWDKAEQALIHAIQTLGEEYTINRGEGA 475

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISR 357
           + G   E IL   +  E Q   +        R +      +G                 R
Sbjct: 476 FYGPKLEFILTDAIGREWQCGTLQVDFVLPERLNASYISSEGSKKRPVILHRAILGSFER 535

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-- 415
            I  L    S    I  + P+ +  +    ++++  +   Q L    IR+ + + + K  
Sbjct: 536 FIGILIEHYSGKLPIW-LAPIQVAVVSITDEAVNYAKQLHQELIDNNIRSTLDISNQKIN 594

Query: 416 -NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
               N          PL  I G  E   G + I+ L   ++                   
Sbjct: 595 YKIRNFFTA----KVPLIAILGKKESESGKIAIRTLGSQEQ------------------H 632

Query: 475 TIPISELVSTVKK 487
            I  SEL++ ++K
Sbjct: 633 VISSSELIAHIRK 645



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G     +K   I   I D I    +  G+  + TP++  +  L +     ++  + +F+L
Sbjct: 262 GMPFWHSKGWTIFKIIKDYISCQIQRAGYIEVNTPMV-LNQKLWEKSGHWEKFRENMFTL 320


>gi|77747502|ref|NP_297735.2| prolyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|114152281|sp|Q9PG57|SYP_XYLFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 564

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R+     G   +  P ++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPTIQPRE-LWEESERWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D       
Sbjct: 90  GNQLLKIKDRKQAEYC 105


>gi|71908290|ref|YP_285877.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas
           aromatica RCB]
 gi|123733181|sp|Q47CM4|SYT_DECAR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71847911|gb|AAZ47407.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas
           aromatica RCB]
          Length = 638

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 3/86 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   I   I   +R +Y N G+  +  P +    SL +     +  
Sbjct: 255 MQDEAP-GLVFWHPKGWAIWQEIEGYMRAVYRNNGYQEVRCPQI-LDKSLWEKSGHWEHY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLA 92
              +F+    + +  +++        
Sbjct: 313 KDNMFT-TSSENRDYAVKPMNCPGHV 337



 Score = 43.7 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  ++             Q L +AG RAE  L  ++    +++       P  +
Sbjct: 535 WLAPVQVVVLNISEKQADYAAEVAQKLHSAGFRAEADL-RNEKITYKIREHSLNRLPYQL 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  E++ G++ ++
Sbjct: 594 VVGDKEKADGLVAVR 608


>gi|15604249|ref|NP_220765.1| prolyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226191|sp|Q9ZDE7|SYP_RICPR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3860941|emb|CAA14841.1| PROLYL-TRNA SYNTHETASE (proS) [Rickettsia prowazekii]
 gi|292571991|gb|ADE29906.1| Prolyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 432

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/109 (9%), Positives = 33/109 (30%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +++   I + +R+     G   +  P ++ +    +     +  
Sbjct: 31  MIMKQAAGLYTWLPLGLKVLKNIENVVRSNMNKVGALEVLMPCIQPAHLWIES-GRFEHY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            K +   QD     +       D+   + R   +++  +       +  
Sbjct: 90  GKEMLKFQDRHDNTLLFGPTNEDMITDIFRRNIKSYKDLPKNLYHIQWK 138



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 1/103 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               ++      LI    HD+  +       + L    I   ++  +    G++    D 
Sbjct: 327 IWPCSVAPFKVSLINLNIHDNKCVELAAKTDKELSHQNIEV-LYDDTDARPGSKFATHDL 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              P  II G  + +  ++++KD   G     E++N  ++ + 
Sbjct: 386 IGSPYQIIIGPKKAANNIVELKDRKTGVLEDIEVENIINYIKN 428


>gi|330800299|ref|XP_003288175.1| threonyl-tRNA synthetase [Dictyostelium purpureum]
 gi|325081805|gb|EGC35308.1| threonyl-tRNA synthetase [Dictyostelium purpureum]
          Length = 713

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/160 (8%), Positives = 41/160 (25%), Gaps = 21/160 (13%)

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
                     D    + +   +           + + ++               ++ T+ 
Sbjct: 566 IRFDLEYQSDDATDVKKRPVIIHRAILGSVERMMAILMEHTAGKWPFWVSPRQAIVVTVA 625

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
              +         + +   G   ++   S K  G +++ A        ++ G  E     
Sbjct: 626 KQHNEYGH--KVAKQISELGYYCDID-ESDKTIGKKVREAQLAQYNYILVVGQEEIDNNK 682

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + ++                      V + +I + ELV+ 
Sbjct: 683 VNVR------------------TRDNVVRGSISVEELVAE 704



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 4/78 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N+++D IR  Y N GF  + +P + +S  L +      + ++ +F++
Sbjct: 338 GSAFFLPHGTRIYNKLVDFIRAEYHNRGFSEVISPSV-FSQKLWEQSGHWAKYSENMFNI 396

Query: 74  -QDDDGQWISLRYDLTAP 90
             D   +  SL+      
Sbjct: 397 PVDK--ETFSLKPMNCPG 412


>gi|34540714|ref|NP_905193.1| prolyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|81417446|sp|Q7MVS7|SYP_PORGI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|34397028|gb|AAQ66092.1| prolyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 493

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 4/104 (3%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  + + L+    K    TQ LR  GI  +     +K  G + 
Sbjct: 293 GLVLPPKLAPYQVVIIPIYRNEEQLAQIDEKATQITQALRAKGISVKYDNSDNKKPGWKF 352

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              + +  P+ +  G  +     ++I       + +  +   E 
Sbjct: 353 AEYELKGIPVRLAMGARDLENNTIEIARRDTLTKETVGLDGIEE 396


>gi|70733467|ref|YP_263242.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|68347766|gb|AAY95372.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 629

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 68/237 (28%), Gaps = 7/237 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + SE    +     I  E    ++   +        G +E+    E   
Sbjct: 382 DDAHIFCTPQQMQSECAATIALVFDIYKEFGFDQVAVKLSTRPDHRIGSDEVWDQLEEAL 441

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                S  I        G  Y     +   +AI         Q  +           D  
Sbjct: 442 VGALQSMHIDYRINPGEGAFYGPKLEFVLRDAIGRDWQCGTLQVDLNLPERFAISYIDER 501

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             R +   +    F      + + L+    +              ++         +  +
Sbjct: 502 GERCQPVMLHRALFGSLERFIGILLEHHGGALPLWLAPQQA--VVLNISEAQADYARAIS 559

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
             LR  G+RA   L  ++  G +++    +  P  ++ G  E+  G + ++    G+
Sbjct: 560 DSLRRHGLRASADL-RNEKIGYKIREHSLQKVPYLLVVGEKEKDGGYVSLRS-RNGE 614



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 1/79 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   ++  +R   E  G+  + TP +     L +           +F+ 
Sbjct: 261 GSVFWHAKGWTLFQELIGYMRRRQEQAGYQEVNTPDVMDRG-LWETSGHWQNYRDHMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLA 92
              D +  +L+        
Sbjct: 320 TTQDQRTFALKPMNCPGAV 338


>gi|238757782|ref|ZP_04618965.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704025|gb|EEP96559.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 642

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/348 (13%), Positives = 95/348 (27%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G ++L   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDLWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K     R   + Q+ 
Sbjct: 594 LVCGDKEVESGKIAVRTRRGKDLGSLDVNVVVDKLLTEIRSRSLHQLE 641



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA D L     +
Sbjct: 425 EKRIGSDDLWTRAEDDLAAALTE 447


>gi|262376731|ref|ZP_06069959.1| prolyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262308441|gb|EEY89576.1| prolyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 572

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 46/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ N++   +R   +  G   +  P+ + + SL +      + 
Sbjct: 31  MIRKLASGLYTWLPMGVRVLNKVEAIVREEMDKVGSLQVYMPVTQPA-SLWEESGRYVQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +    D  G    L     ++   LAR   +++  +          +R     R   
Sbjct: 90  GPELLRFNDRHGNPFVLGPTHEEVITDLARNELKSYKQLPANFYQVQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +    +M          +G
Sbjct: 150 MRSREFIMKDAYSFHANQESLQQTYDDMYAAYCKIFTRLG 189



 Score = 41.0 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 28/103 (27%), Gaps = 3/103 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSD--SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+      ++   +     L+ AG    +   + +  G +
Sbjct: 465 DEKGIIWPTAIAPFEVAIVPMNAHKSPRTMEAAEALYAELQAAGFDVLLDDRNER-PGVK 523

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               +    P  I+ G      G  + K     + ++   +  
Sbjct: 524 FSDLELTGIPHRIVIGEKGLDAGTFEYKGRRDAESVNISKEEL 566


>gi|229846781|ref|ZP_04466888.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810270|gb|EEP45989.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 643

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 99/366 (27%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L   G+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKIAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
            +L++ 
Sbjct: 637 LKLLNE 642



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|213389878|gb|ACJ46005.1| threonyl tRNA synthetase [Palm lethal yellowing phytoplasma]
          Length = 641

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 48/161 (29%), Gaps = 19/161 (11%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G  ++     +        + R +  L         +      ++    ++   L  
Sbjct: 500 TYVGSDNKEHNPILIHRAIISTLERFVAFLIEKNKGFFPLWLAPVQVVLIPINNIKYLKY 559

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   ++ +    R+E+    + +   +++ + +   P  I+ G  E     L  ++   
Sbjct: 560 TQKINKIFKKNNFRSEINDKDN-SLSYKIRESQKNKIPYQIVIGEKELLNSTLTFREYRS 618

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                                 T+ I E +    K ++E K
Sbjct: 619 ------------------NLSQTVSIEEFIDIFNKKIKEKK 641



 Score = 43.3 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 5/92 (5%)

Query: 2   GKKTKLRAELPR---GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
            K+ +     P    GF     K   IR  I   I N    Y +  + TP+L   +    
Sbjct: 245 NKEQEFFMLTPDVGLGFPLWLPKGATIRRIIERYIVNKELEYDYQHVYTPVLANIELYQT 304

Query: 59  FLPDEDRPNKGVFSLQD-DDGQWISLRYDLTA 89
                    + +F +    + + I LR     
Sbjct: 305 S-GHLKLYKENMFPIMKLQNDEKIVLRPMNCP 335


>gi|115375454|ref|ZP_01462714.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115367497|gb|EAU66472.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 616

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/286 (11%), Positives = 74/286 (25%), Gaps = 19/286 (6%)

Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +   +  +  G           +L+ + ++ R        GL  V+    +       + 
Sbjct: 314 MNCPSHHLYFGFKRHSYRDLPLRLHTQDVLHRNEAAGSLGGLTRVRQFAQDDAHIYCTED 373

Query: 227 TKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNS 286
             G     +++   V  L         +             G + L   +E   +    +
Sbjct: 374 QIG-----DEVRRFVKLLDHVYNAVGLKYSAKFSTRPEQRLGEDALWDRAESALEGVLKT 428

Query: 287 NRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG-SVGGGGRYDGLVSRFKGQN 345
             +        G  Y     ++       +  K +            R+D          
Sbjct: 429 LGVPYEVKPGEGAFYGPKIDFDV---SDSIGRKWQLGTIQLDYLAAQRFDLKYIGEDNAE 485

Query: 346 VPAT----GFSIGISRLIVALKSL--ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                          R I  L      +    +  +  VL+T  D     L   +     
Sbjct: 486 HRPVVLHRAIYGSFERFIAILIEHFAGAFPAWLAPIQAVLVTVADRQ---LDYARKVRDQ 542

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           LR  G R E+     ++   +++    +  P  ++ G  E   G +
Sbjct: 543 LRAKGFRVELD-DRGQSLNAKIREWQIQKLPFTLVIGDNEVEAGGV 587



 Score = 41.0 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   +   +   +R +    G+  I+TPL+ ++  L +      +  + +F +
Sbjct: 241 GSAFWSPKGTTLYQTLSQWMRRLTAETGYVEIKTPLM-FNKGLWEASGHWGKYKENMFLV 299

Query: 74  QDD--DGQWISLRYDLTAP 90
            D+       SL+      
Sbjct: 300 LDNESGEHDFSLKPMNCPS 318


>gi|76162547|gb|AAX30465.2| SJCHGC03807 protein [Schistosoma japonicum]
          Length = 106

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/70 (10%), Positives = 20/70 (28%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +   S            L  AG    +     +    +++          ++ G  
Sbjct: 3   QVLVVPVVSACDEYAIEVKNRLHDAGFMVSVDTDPGRTLNKKIRNGQLLQNNFILVVGEK 62

Query: 439 ERSRGMLQIK 448
           E + G + ++
Sbjct: 63  EIANGTVNVR 72


>gi|332885366|gb|EGK05615.1| threonyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 650

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 33/95 (34%), Gaps = 1/95 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +             +   +  GI +++    ++  G +++  + +  P  +I G  
Sbjct: 548 QVVILPISEKFNDYAHRVSHYFKQQGISSQVD-DRNEKIGRKIRDNELKRIPYLLIVGEK 606

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           E     + I+    G + S +  N  +     + Q
Sbjct: 607 EAESEEVSIRKQGDGDKGSMKFVNFAAQLNEEMEQ 641


>gi|327191138|gb|EGE58182.1| ATP phosphoribosyltransferase involved in histidine biosynthesis
          protein [Rhizobium etli CNPAF512]
          Length = 373

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 33 IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
          +   ++    + I+TP+++ ++       ++ R  + +F  + + G  + LR + T P+ 
Sbjct: 13 LLAEFDARKAERIDTPVIQPAEPFLDIAGEDLR--RRIFMTESETGASLCLRPEFTIPVC 70


>gi|261749266|ref|YP_003256951.1| threonyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497358|gb|ACX83808.1| threonyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 408

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 39/115 (33%), Gaps = 1/115 (0%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y    +  + + V      +G    ++A+    +  N    + P     +      +   
Sbjct: 271 YYKGKNNERHRPVMIHRAPLGSLERLIAILIEHTKGNLPLWLVPNQAVILPISDKYIIYA 330

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +    ++    IR  +    ++    +++ ++    P  II G  E    M+ ++
Sbjct: 331 KKILNLMLNHNIRVFLD-ERNEKIDKKIRDSEENKIPYMIILGEKEEKNKMISLR 384



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 68/261 (26%), Gaps = 13/261 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +    R  + + + +I +  G++ I TP + +     +     D+  K  F  
Sbjct: 30  GLPLWLPRGTIFRRNLEEFLTDIQKKSGYEMIMTPHIGHKKLYVRS-GHWDKYGKDSFKP 88

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG-PVFRNEKHGPGRFRQFIQ 130
                  +   L+             +   +           P    E     R+ Q  +
Sbjct: 89  IQTPHSEEEFLLKPMNCP--------HHCEVYRSQEWSYRDLPKRFAEFGTVYRYEQSGE 140

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                        DA +       LE    K  +    +  R        ++ L    K+
Sbjct: 141 LHGLTRVRCFTQDDAHIFCTYDQLLEEFK-KVINLVFYVFRRLGFLEYTIRVSLRDPKKI 199

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
           +  +   +  +  +   +Q VK    +           G  L     D +     +   +
Sbjct: 200 HNYIGSDKNWEMAENAIIQAVKEEKLDASLHYGEAAFYGPKLDFLIKDSLDRNWQLGTIQ 259

Query: 251 SMHELYELVKGTIAGEKGFNE 271
             + L E       G+     
Sbjct: 260 VDYNLPERFDLYYKGKNNERH 280


>gi|218671287|ref|ZP_03520957.1| ATP phosphoribosyltransferase regulatory subunit [Rhizobium etli
          GR56]
          Length = 192

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 33 IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
          +   ++    + I+TP+++ ++       ++ R  + +F  + + G  + LR + T P+ 
Sbjct: 13 LLAEFDARKAERIDTPVIQPAEPFLDIAGEDLR--RRIFMTESETGASLCLRPEFTIPVC 70


>gi|218508904|ref|ZP_03506782.1| ATP phosphoribosyltransferase regulatory subunit [Rhizobium etli
          Brasil 5]
          Length = 142

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 33 IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
          +   ++    + I+TP+++ ++       ++ R  + +F  + + G  + LR + T P+ 
Sbjct: 13 LLAEFDARKAERIDTPVIQPAEPFLDIAGEDLR--RRIFMTESETGASLCLRPEFTIPVC 70


>gi|198284332|ref|YP_002220653.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666034|ref|YP_002426993.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|259516307|sp|B7J7T0|SYT_ACIF2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|259516338|sp|B5EN57|SYT_ACIF5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|198248853|gb|ACH84446.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218518247|gb|ACK78833.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 644

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +          +  + +L   GIRAE  L  ++  G +++    R  P  +
Sbjct: 537 WLAPVQAVVLPISEHYSEYAESVSDVLVKRGIRAETDL-RNEKIGYKIRAHTLRRVPYLL 595

Query: 434 IQGTGERSRGMLQIKD 449
           + G  E+  G + ++D
Sbjct: 596 VVGEREKEAGTVAVRD 611



 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 70/255 (27%), Gaps = 13/255 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R  I D  +  +   G+D + TP + + + L      +D  ++ +F  
Sbjct: 262 GLVFWHPMGSRVRRVIEDFWKEAHVEAGYDLLYTPHIAH-EQLWYTSGHKDFYSESMFDP 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             D+GQ   L+  +  P       +         +YR  P+   E     R         
Sbjct: 321 MQDEGQAYQLKP-MNCPF------HILIYKDKLHSYRDLPIRWAELGTVYRHEMSGALHG 373

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA +          +G         +          ++  ++   +    
Sbjct: 374 LMRVRGFTQDDAHVFCRPDQIEAEIGAVLVLVRKILGTFG-----FDQYEINLSTRPGHS 428

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      D   +     ++    E + D  G    G  +  +  D +         +   
Sbjct: 429 VGSDEIWDAATQALRNALERAGLEYQVDAGGGAFYGPKIDLKIQDAIGRKWQCSTVQLDF 488

Query: 254 ELYELVKGTIAGEKG 268
            L E        E G
Sbjct: 489 NLPERFAMEYVAEDG 503


>gi|238791701|ref|ZP_04635338.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728805|gb|EEQ20322.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 642

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 102/356 (28%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G ++L   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDLWTRAEDDLAAALTENDIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           ++ G  E   G + ++        +R  K+  S        + + + +L++ ++  
Sbjct: 594 LVCGDKEVESGKIAVR--------TRRGKDLGSLD------VNVVVDQLLTEIRSR 635



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA D L     +
Sbjct: 425 EKRIGSDDLWTRAEDDLAAALTE 447


>gi|238787089|ref|ZP_04630889.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724877|gb|EEQ16517.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 642

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 102/356 (28%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G ++L   +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDLWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           ++ G  E   G + ++        +R  K+  S        + + + +L++ ++  
Sbjct: 594 LVCGDKEVESGKIAVR--------TRRGKDLGSLD------VNVVVDQLLTEIRSR 635



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHVFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA D L     +
Sbjct: 425 EKRIGSDDLWTRAEDDLAAALTE 447


>gi|323345462|ref|ZP_08085685.1| proline--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323093576|gb|EFZ36154.1| proline--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 493

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 69/236 (29%), Gaps = 31/236 (13%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V +E   +         + S   R          EA++      +       G     
Sbjct: 194 LRVYAEFAEQWMAVPVLQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 +++               +RLI AL                    V+I  +   
Sbjct: 254 SFDVTYLNKENKPEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPRLAPIQVVIIPITKG 313

Query: 387 SDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + L    +K       LR  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 IEQLQAISAKLSPIIASLRELGINVKYDDTDNKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
               +++                   R   + + T+ +  +V  VK +L + ++ I
Sbjct: 372 EDNTIEV------------------MRRDTLEKETVSLDGIVDYVKHLLDDMQKNI 409


>gi|300311294|ref|YP_003775386.1| threonyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300074079|gb|ADJ63478.1| threonyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 635

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/256 (10%), Positives = 64/256 (25%), Gaps = 14/256 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I  ++   +R +Y++ G+  ++ P +    SL +     +   + +F+ 
Sbjct: 261 GLIFWHPKGWTIWQQVEQYMRRVYQDNGYQEVKAPQI-LDRSLWEKTGHWENYRENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +         +YR  P+   E     R         
Sbjct: 319 TESENRAYALKPMNCPG-------HIQIFNSGLHSYRDLPLRYGEFGQCHRNEPSGALHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +        E V           +     +  ++           E 
Sbjct: 372 MMRVRGFTQDDGHIFCTEDQIQEEVAAFNRVVREVYDCFGFKEVAVKLALRPEKRIGAEE 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      DK +    + ++    E           G  +     D +         +   
Sbjct: 432 V-----WDKAENALREAIRASGSEWEELPGEGAFYGPKIEYHLKDSIGRSWQCGTMQVDF 486

Query: 254 ELYELVKGTIAGEKGF 269
            +   +      E   
Sbjct: 487 SMPARLGAEYVTEDNN 502



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
              +A+     +      + P  +  ++         Q   Q L+  G R E  L  ++ 
Sbjct: 518 ERFIAILIENHAGAMPLWLAPTQVVILNISDAQADYVQNVAQTLKKQGFRVETDL-RNEK 576

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +++    +  P  ++ G  ER    + ++
Sbjct: 577 ITYKIRQHSIQKPPYILVVGDKERDANTVAVR 608


>gi|315607978|ref|ZP_07882971.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250447|gb|EFU30443.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 650

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 51/141 (36%), Gaps = 10/141 (7%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +          +   +   + G+R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYAKSVARYFDSVGVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A +    ++  G +++  + +  P  +I G  E + G++ ++    G++ +  ++     
Sbjct: 578 AIID-ERNEKIGRKIRDNELKRVPYMVIVGEKESAEGLVSMRKQGGGEQATMTMEEFAQR 636

Query: 467 REARVAQITIPISELVSTVKK 487
             + VA       +++STVK+
Sbjct: 637 INSEVA-------DMLSTVKE 650


>gi|301170119|emb|CBW29723.1| threonyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 643

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 98/366 (26%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     ++         Q   + L   G+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPVWLAPTQAVVINITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
             L++ 
Sbjct: 637 LTLLNE 642



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|167045640|gb|ABZ10289.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
           [uncultured marine microorganism HF4000_APKG10K24]
          Length = 439

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 35/124 (28%), Gaps = 21/124 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +       V    +  +       +     LR      +     +++ G + +  D 
Sbjct: 334 LHLHRELAPVTVAALPLSRNEKLTPTAREVYAKLRKH-FNTQ--YDDAQSIGRRYRRQDE 390

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  +           + I+D                     ++Q  IPI++LV  +K
Sbjct: 391 IGTPYCVTIDFDTLEDHQVTIRDRDT------------------MSQSRIPITDLVDVLK 432

Query: 487 KILQ 490
             L+
Sbjct: 433 DKLE 436


>gi|149238003|ref|XP_001524878.1| threonyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451475|gb|EDK45731.1| threonyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 754

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D++R  Y   G++ + TP + YS  L +         + +FS + + 
Sbjct: 369 WLPHGTRIYNTLVDTLRYEYRKRGYEEVITPNM-YSTKLWETSGHWQNYKENMFSFEVEK 427

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 428 -ETFGLKPMNCPG 439


>gi|108758923|ref|YP_631780.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|122981032|sp|Q1D6E3|SYT_MYXXD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|108462803|gb|ABF87988.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 642

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 5/96 (5%)

Query: 347 PATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
               F        + ++    +    +  +  VL+T  D  +D     +     LR  G 
Sbjct: 518 HRAIFGSFERFTAILIEHFAGAFPAWLAPIQAVLVTVADRQND---YARKVRDSLRAKGY 574

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           R E       +   +++ A  +  P  ++ G  E S
Sbjct: 575 RVEFD-ERGLSMNAKIREAQLQKVPFTLVVGDNEVS 609



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   +   + + +R + +N G+  I+TPL+ ++  L +      +  + +F +
Sbjct: 267 GSAFWTPKGTTLYTTLSNWMRQLTQNDGYVEIKTPLM-FNKGLWETSGHWGKYKENMFLV 325

Query: 74  QD--DDGQWISLRYDLTAP 90
            D        SL+      
Sbjct: 326 LDSESGEHDFSLKPMNCPS 344


>gi|330943729|gb|EGH46017.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 173

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 4/114 (3%)

Query: 47  TPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-ARYVAENFDTIVFP 105
            P L   D+  +     +     +++ +D  G+   L  + TA    R  +E        
Sbjct: 1   MPALWGQDTFIEKAGGSEIIG-QMWAFEDKAGRPCCLIPEATALFQER--SEALLEGRRE 57

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
              + +   +R E+   GR+R+F Q  ++ +  S + A      +    L+++G
Sbjct: 58  ALFFYVARCYRYERPQAGRYREFTQLGLEILSPSPQQALLRSQAICTGFLDSLG 111


>gi|283796156|ref|ZP_06345309.1| glycine--tRNA ligase [Clostridium sp. M62/1]
 gi|291076375|gb|EFE13739.1| glycine--tRNA ligase [Clostridium sp. M62/1]
 gi|295092207|emb|CBK78314.1| glycyl-tRNA synthetase, dimeric type [Clostridium cf.
           saccharolyticum K10]
 gi|295115529|emb|CBL36376.1| glycyl-tRNA synthetase, dimeric type [butyrate-producing bacterium
           SM4/1]
          Length = 462

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/227 (6%), Positives = 58/227 (25%), Gaps = 8/227 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      E     +      ++ +   +   +     ++       +    +        
Sbjct: 237 EWFAYWKEFCINWLKTLGIKDDEMRARDHSPEELCFYSKATTDLEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +       +     + +  +      ++ A   ++         + +    
Sbjct: 297 RTDYDLTQHQNTSGQDMTYFDDEKKEKYIPYVIEPSLGADRVTLAFLCSAYDEEEIGEGD 356

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + PV I  +          +     L +     E       N G + +  
Sbjct: 357 VRTVLHFHPAIAPVKIGVLPLSKKLNEGAEKVYAEL-SKYYNCEFD--DRGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           D    P  +       + G + ++D    +++   I   +++ E + 
Sbjct: 414 DEIGTPFCVTYDFDSETDGAVTVRDRDTMEQVRIPIAELKNYFEDKF 460


>gi|166365884|ref|YP_001658157.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166088257|dbj|BAG02965.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 599

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  +      L   +  T  ++  GIRAE    S +  G  ++ A+    P+  
Sbjct: 497 WLAPVQIRLLPVSDTQLDYAKEVTAKMQLLGIRAETD-TSGERLGKMIRNAETAKIPVMA 555

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E     L I+  A G      ++   +  E+ + 
Sbjct: 556 VVGAKEMESNSLSIRTRATGDLGVISVEEVVAKLESAIQ 594



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR+ + D ++      G+ P+ TP +   D   K      +  + +F +
Sbjct: 213 GLPLWTPKGTLIRSLLEDFLKKEQLKRGYLPVVTPHIARVDLF-KISGHWQKYKEDMFPM 271

Query: 74  QDDDGQW 80
             DD + 
Sbjct: 272 MADDEES 278


>gi|296113641|ref|YP_003627579.1| prolyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921335|gb|ADG61686.1| prolyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326568678|gb|EGE18749.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 572

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 41/157 (26%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  R+   +R   E      +  P+ +  + L       +     
Sbjct: 34  KLASGLYVWMPMGLRVLKRVERIVREEMEKIDSQELLMPVTQPGE-LWHESGRWEDYGAE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +   +D   +   L     ++   +AR   +++  +          +R     R      
Sbjct: 93  LLRFKDRHSRDFVLGPTHEEVITDIARNELKSYKQLPITFYQIQTKFRDEIRPRFGVMRA 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F             S      +M          +G
Sbjct: 153 REFTMKDAYSFHIDKESLANTYQDMYDAYNRIFTRLG 189



 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 35/112 (31%), Gaps = 5/112 (4%)

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                 +     E   ++I      ++     D D+ +K Q   Q L+  GI   +    
Sbjct: 460 NHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTLKARGINVLLDDRD 519

Query: 414 SKNFGNQLKYADR--RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +     +K+AD      P  I+      +    +  + A G +    +   
Sbjct: 520 ER---AGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLDEL 568


>gi|301089746|ref|XP_002895146.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262101719|gb|EEY59771.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 744

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 4/77 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF         I  ++L  IR  Y   G+  I TP +   + L           + +F 
Sbjct: 366 SGF--WLPHGSAIYFKLLKFIREQYRARGYTEIITPNIYNME-LWNISGHAQHYKENMFV 422

Query: 73  LQDDDGQWISLRYDLTA 89
             D +GQ  +L+     
Sbjct: 423 F-DVEGQEYALKPMNCP 438



 Score = 37.9 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 67/238 (28%), Gaps = 12/238 (5%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
            + D++  F +   +  E +D +     +     +    EL   +   EK   EL     
Sbjct: 482 FQQDDAHIFCRDDQIKKEVLDFLTFMKYVYDVFGIEFNLEL---STRPEKAMGELEQWER 538

Query: 278 LVRKSGYNSNRIKISSTIV--RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
              +     +    +   V   G   + G   + ++   +  + Q   V        R++
Sbjct: 539 AETQLAQALDEFVGAGKWVVNPGDGAFYGPKIDIMITDALKRQHQCATVQLDFQLPIRFN 598

Query: 336 GLVSRFKGQNVPA-----TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                   +N              + R +  L    +            I  +   +  +
Sbjct: 599 LKYRTDDAENFKRPVIIHRAIYGSLERFVAVLVEHYAGKFPFWLSPR-QILIVTVGAAFV 657

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                    L  AG   E+   S K    +++     +    ++ G  E+    + I+
Sbjct: 658 DYGYEVKDALFRAGFDVEID-DSGKTLNKKIREGQMAHYNFILVVGAHEKETRSVNIR 714


>gi|254569756|ref|XP_002491988.1| Protein with similarity to tRNA synthetases [Pichia pastoris GS115]
 gi|238031785|emb|CAY69708.1| Protein with similarity to tRNA synthetases [Pichia pastoris GS115]
 gi|328351517|emb|CCA37916.1| prolyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 564

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 62/473 (13%), Positives = 137/473 (28%), Gaps = 41/473 (8%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  +++   +   G        +R   ++ + IR   +  G   +E   L       +  
Sbjct: 34  MLLQSRFIYQPAAGIVHWLPLGLRTYKKLQNVIRKRMDQAGGLEMELSSLSSKHLWER-T 92

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY----DLT------------APLARYVAENF--DTI 102
              D  N  +F  +D   +   L      ++T             PL  Y       D +
Sbjct: 93  KRWD--NNELFKFKDSKDRDYCLVPTCEEEITNLVGDLCSSYKDLPLLVYQISRKYRDEL 150

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKR 162
                  R       + +     ++      DNV  +      ++ + +       G   
Sbjct: 151 RPRGGLLRGREFLMKDAYSFDLTKEDGLKSYDNVNEAYRRIFQDLKLPVTVANADSGSIG 210

Query: 163 NDYHIGIN-NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
            D  +  +   +  + IL +          E+   L           +    +  +  T 
Sbjct: 211 GDLSLEYHLIHESGEDILFRCNSCQTVSNVEKCQSLPDKQFKGVQEAECQYFINKDRNTL 270

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
               + KG  L  + +   +  +   +++ M       +   +      E++ + +    
Sbjct: 271 IIMYYPKGRKLNPQYVKDEIPDIDFSIDEEMALTLFKNESEESSSFLVKEIIRVIDPRVT 330

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGF-------PVMNEKQKPVVFGSVGGGGRY 334
           S  N   +K+         +    + EAI G          ++E     V  +     +Y
Sbjct: 331 SNTNMPDLKVLYHRNSMFTFTDIPIVEAIAGERCYECEKGTLSEHTAIEVGHTFYLDKKY 390

Query: 335 DGLVSRFKGQNVPA-----TGFSIGISRLIVALKSL----ESSTNNIKEMGPVLITTMDH 385
              +                G        ++A  +     E      + + P  IT + +
Sbjct: 391 SSPLDCTVVNEQNEQTTVYMGCYGIGVSRLIAAIAQTSRDEVGLTWPQIIAPYQITLLSN 450

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGT 437
            + S       T++L  +    ++     K + G++LK +     PL II G 
Sbjct: 451 KTSSKKNLDTVTEIL--SSFDVQVDNRDGKFSMGHKLKQSKVAGIPLQIIVGK 501


>gi|327440917|dbj|BAK17282.1| glycyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 462

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/235 (8%), Positives = 57/235 (24%), Gaps = 10/235 (4%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       + + + +       + +           
Sbjct: 226 LEFFCKPGEDLEWHSYWKEFCKNWLLALGMKEDSMRLRDHEDDELSHYSNATTDIEFRFP 285

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           + +    +      +       +  V      ++ A   ++     
Sbjct: 286 FGWGELWGIADRTDYDLKQHMEHSGEDFTYIDPVSNERYVPYCIEPSLGADRVTLAFLCD 345

Query: 359 IVALKSLESSTNN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + LE             + P     +        +       LR A          
Sbjct: 346 AYEEEQLEGDDTRTVLRFHPALAPFKAAVLPLSKKLSEEAGDVWADLRKA-FPV--DYDE 402

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           S++ G + +  D    P  I      +  G + ++     +++   I   +++ E
Sbjct: 403 SQSIGKRYRRQDEIGTPFCITYDFDSKEDGQVTVRHRDSMEQIRMPIAEVKAYIE 457


>gi|326572669|gb|EGE22658.1| prolyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 572

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 41/157 (26%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  R+   +R   E      +  P+ +  + L       +     
Sbjct: 34  KLASGLYVWMPMGLRVLKRVERIVREEMEKIDSQELLMPVTQPGE-LWHESGRWEDYGAE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +   +D   +   L     ++   +AR   +++  +          +R     R      
Sbjct: 93  LLRFKDRHSRDFVLGPTHEEVITDIARNELKSYKQLPITFYQIQTKFRDEIRPRFGVMRA 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F             S      +M          +G
Sbjct: 153 REFTMKDAYSFHIDKESLANTYQDMYDAYNRIFTRLG 189



 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 35/112 (31%), Gaps = 5/112 (4%)

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                 +     E   ++I      ++     D D+ +K Q   Q L+  GI   +    
Sbjct: 460 NHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTLKARGINVLLDDRD 519

Query: 414 SKNFGNQLKYADR--RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +     +K+AD      P  I+      +    +  + A G +    +   
Sbjct: 520 ER---AGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLDEL 568


>gi|326566943|gb|EGE17081.1| prolyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 572

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 41/157 (26%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  R+   +R   E      +  P+ +  + L       +     
Sbjct: 34  KLASGLYVWMPMGLRVLKRVERIVREEMEKIDSQELLMPVTQPGE-LWHESGRWEDYGAE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +   +D   +   L     ++   +AR   +++  +          +R     R      
Sbjct: 93  LLRFKDRHSRDFVLGPTHEEVITDIARNELKSYKQLPITFYQIQTKFRDEIRPRFGVMRA 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F             S      +M          +G
Sbjct: 153 REFTMKDAYSFHIDKESLANTYQDMYDAYNRIFTRLG 189



 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 35/112 (31%), Gaps = 5/112 (4%)

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                 +     E   ++I      ++     D D+ +K Q   Q L+  GI   +    
Sbjct: 460 NHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTLKARGINVLLDDRD 519

Query: 414 SKNFGNQLKYADR--RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +     +K+AD      P  I+      +    +  + A G +    +   
Sbjct: 520 ER---AGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLDEL 568


>gi|9105289|gb|AAF83255.1|AE003895_6 prolyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 582

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R+     G   +  P ++  + L +     ++ 
Sbjct: 49  MIRKLASGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPTIQPRE-LWEESERWEKF 107

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D       
Sbjct: 108 GNQLLKIKDRKQAEYC 123


>gi|172058202|ref|YP_001814662.1| threonyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990723|gb|ACB61645.1| threonyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 646

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 61/233 (26%), Gaps = 8/233 (3%)

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
           +  +      +   +  +        E    EL    + +    + +     ++     L
Sbjct: 418 ITDYKFRLSYRDPADKEKYFDNDAIWEMAQRELKETMDELELPYFEAEG--EAAFYGPKL 475

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           +               +           +   G  DG   R    +             +
Sbjct: 476 DVQVRTALGKDETLSTVQLDFLLPERFELTYKGN-DGQDHRPVVLHRGVVSTMERFVAYL 534

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +     E        + PV +  +   S      +    ML   GIR E      +  G 
Sbjct: 535 I----EEYKGAFPTWLAPVQVKLIPVSSVHEDYAREIKTMLLKKGIRVETDF-RDEKLGY 589

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +++ A     P+ ++ G  E     + I+        +  ++   S  E  +A
Sbjct: 590 RIREAQVNKVPVMLVLGDKEIEAREVNIRRYGSKDSSNASLEQFVSDLEQEIA 642



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 8/110 (7%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   IR  +   I +     G++ + TP+L   +   K     D     +F   + D
Sbjct: 270 WLPKGAAIRRTVERYIVDKELELGYEHVYTPVLGSVELY-KTSGHWDHYQDDMFPKMEMD 328

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
            + + LR             +        R+YR  P+   E  G  R+  
Sbjct: 329 NEELVLRPMNCP-------HHMMIYKNEPRSYRDLPLRVAELGGMHRYEM 371


>gi|270009374|gb|EFA05822.1| hypothetical protein TcasGA2_TC008604 [Tribolium castaneum]
          Length = 685

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 41/146 (28%), Gaps = 21/146 (14%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                      + +  +S              ++  +    D     Q   + L  AG  
Sbjct: 553 HRAILGSVERMIAILTESCGGKWPFWISPRQAMVIPVGPTYD--EYAQDVKKKLYEAGFM 610

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE+   +      +++ A        ++ G  ERS   + ++                  
Sbjct: 611 AEVDTDAGDTMNKKIRNAQLAQFNFILVVGEKERSSQTVNVR------------------ 652

Query: 467 REARVAQITIPISELVSTVKKILQEN 492
               +    I +  L+   K +LQEN
Sbjct: 653 TRDNIVHGEISVEGLIEKFK-VLQEN 677



 Score = 42.1 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N +++ I+  Y   GF  + +P + ++  L +           +FS  D +
Sbjct: 309 FQPRGAHIYNTLINFIKKEYRKRGFQEVISPNI-FNAKLWQVSGHWAHYADNMFSF-DVE 366

Query: 78  GQWISLRYDLTAP 90
               +L+      
Sbjct: 367 KDKFALKPMNCPG 379


>gi|145634324|ref|ZP_01790034.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268304|gb|EDK08298.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 643

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 99/366 (27%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALVHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L   G+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
            +L++ 
Sbjct: 637 LKLLNE 642



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|299768873|ref|YP_003730899.1| prolyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298698961|gb|ADI89526.1| prolyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 571

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 44/160 (27%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + SL +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPA-SLWEESGRYEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D       L     ++   +AR   +++  +          +R     R   
Sbjct: 90  GPELLRFKDRHTNPFVLGPTHEEVITDMARNELKSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLG 189


>gi|226324133|ref|ZP_03799651.1| hypothetical protein COPCOM_01911 [Coprococcus comes ATCC 27758]
 gi|225207682|gb|EEG90036.1| hypothetical protein COPCOM_01911 [Coprococcus comes ATCC 27758]
          Length = 481

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 12/108 (11%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I    H    L K    T+ L+ AG   ++   S K+ G +    +    P  I  G  +
Sbjct: 297 IPIAQHKEGVLEKANELTERLKKAGYSVKID-DSEKSPGWKFSEQEMLGIPTRIEIGPKD 355

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             +  + +      +++   +   E+            + E++ T++K
Sbjct: 356 IEQNQVVVVRRDTREKIVVSLDEIET-----------KLGEILETIQK 392


>gi|326559635|gb|EGE10049.1| prolyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326560025|gb|EGE10420.1| prolyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326562507|gb|EGE12824.1| prolyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326567687|gb|EGE17793.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326574268|gb|EGE24216.1| prolyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326575054|gb|EGE24983.1| prolyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 572

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 41/157 (26%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  R+   +R   E      +  P+ +  + L       +     
Sbjct: 34  KLASGLYVWMPMGLRVLKRVERIVREEMEKIDSQELLMPVTQPGE-LWHESGRWEDYGAE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +   +D   +   L     ++   +AR   +++  +          +R     R      
Sbjct: 93  LLRFKDRHSRDFVLGPTHEEVITDIARNELKSYKQLPITFYQIQTKFRDEIRPRFGVMRA 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F             S      +M          +G
Sbjct: 153 REFTMKDAYSFHIDKESLANTYQDMYDAYNRIFTRLG 189



 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 35/112 (31%), Gaps = 5/112 (4%)

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                 +     E   ++I      ++     D D+ +K Q   Q L+  GI   +    
Sbjct: 460 NHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTLKARGINVLLDDRD 519

Query: 414 SKNFGNQLKYADR--RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +     +K+AD      P  I+      +    +  + A G +    +   
Sbjct: 520 ER---AGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLDEL 568


>gi|320105902|ref|YP_004181492.1| prolyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924423|gb|ADV81498.1| prolyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 613

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 36/114 (31%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R  N+I+  +R   +  G   +  P L  ++   +           +F L
Sbjct: 66  GLYSYLFLATRSINKIVAIVREEMDRIG-QEMYLPALNPAEVWQES-GRWTGMGDNMFRL 123

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           +D  G  + L     ++   +AR    ++  +      +        ++  P  
Sbjct: 124 KDRKGADLCLGMTHEEVMTSIARSEIRSYKQLPQ---IWYQIQTKFRDEPRPKS 174



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 3/98 (3%)

Query: 377 PVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
            V++T       +L++  +   + L +AG    +     ++ G + K AD    P  +  
Sbjct: 518 QVIVTVTKQSDATLAEAGETIAKALDSAGFDVLLD-DRDQSAGVKFKDADLIGVPYRVNV 576

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           G      G++++ D   G  +   +       +A + Q
Sbjct: 577 GKK-LVDGLVELVDRLTGNTIECAVNEVVPQLQAAIKQ 613


>gi|307717742|ref|YP_003873274.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531467|gb|ADN01001.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 477

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 11/104 (10%)

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +     L  AG+  EM L    + G +    + R  P+ +  G  +  +    +    
Sbjct: 305 YAKRVFGRLAEAGLSVEMDLDDQNSPGWKFAEWELRGVPIRVEVGPRDMEQEKAVLVRRD 364

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
            G++ +  +               IP+  L+  ++K L    ++
Sbjct: 365 TGEKRAVSVSRLPE---------EIPV--LLEEIQKTLFRRAKD 397


>gi|229916382|ref|YP_002885028.1| threonyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259516484|sp|C4L461|SYT_EXISA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229467811|gb|ACQ69583.1| threonyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 647

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 45/170 (26%), Gaps = 8/170 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   IR  +   I +     G+  + TP+L   D   K     D     +F   + D
Sbjct: 271 WLPKGASIRRTVERYIVDKELELGYQHVYTPVLGSVDLY-KTSGHWDHYQDDMFPKMEMD 329

Query: 78  GQWISLRYDLTAPLA-------RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            + + LR               R   E    I      +R             R+     
Sbjct: 330 NEELVLRPMNCPHHMTIYKHEPRSYRELPLRIAELGGMHRYEMSGALTGLQRVRYMVLND 389

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                     +    ++  ++ +     GIK   + +   +    +   +
Sbjct: 390 GHTFVTPEQMKQEFKDIVHLIQEVYADFGIKDYRFRLSYRDPADKEKYFD 439



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/350 (11%), Positives = 91/350 (26%), Gaps = 26/350 (7%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI---------LEKI 182
              +     +    +M M   + +       +   I  +  +    +         + + 
Sbjct: 311 TSGHWDHYQDDMFPKMEMDNEELVLRPMNCPHHMTIYKHEPRSYRELPLRIAELGGMHRY 370

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            + G     +R+  +   D       + +K    +    +            +    +  
Sbjct: 371 EMSGALTGLQRVRYMVLNDGHTFVTPEQMKQEFKDIV--HLIQEVYADFGIKDYRFRLSY 428

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
               D EK               ++  +EL +        G  +         VR     
Sbjct: 429 RDPADKEKYFDNDAIWEMAQSQLKETMDELELPY--FEAEGEAAFYGPKLDVQVRTALGK 486

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
              +    L F +                  Y G   +     V   G    + R +  L
Sbjct: 487 EETLSTVQLDFLLPERFDL-----------TYTGPDGKDHRPIVLHRGVVSTMERFVAYL 535

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       + PV +  +                L   G+R E  L   K  G +++
Sbjct: 536 IEEYKGAFP-TWLAPVQVKLIPVSHVHDEYVAEVKAELVKRGVRVETDLRDEK-LGYKIR 593

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            A  +  P+ ++ G  ER    + I+   + +++S  +    +     +A
Sbjct: 594 EAQMKKIPMTLVLGDKERDERAVNIRRYGQQEQVSASLDEFIASLTDEIA 643


>gi|296140437|ref|YP_003647680.1| glycyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296028571|gb|ADG79341.1| glycyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 478

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 25/91 (27%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  D     K +     LR      E     ++  G + +  D    P  I      
Sbjct: 387 VLPLSRDEKLSPKARELAADLRQF-WNVEFD--DAQGIGKRYRRQDEIGTPFCITVDFDT 443

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++     +    +     +  AR
Sbjct: 444 LEDDSVTVRERDTMAQERVPLAEVREYLAAR 474


>gi|145591039|ref|YP_001153041.1| prolyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166980145|sp|A4WJ22|SYP_PYRAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145282807|gb|ABP50389.1| prolyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 488

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 4/78 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        +R+R  + + IR  ++  G   +  P+    +  GK         K V
Sbjct: 38  PVKGAYVWRPYGMRLRRHVEELIRRSHDETGHQEVLFPVFIPYEFFGKESQHIRGFEKEV 97

Query: 71  FSLQDDDGQW---ISLRY 85
           F      G+    + LR 
Sbjct: 98  F-WVSKGGEEGERLVLRP 114



 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 77/254 (30%), Gaps = 27/254 (10%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             E + +       E+   E V I + +      +  I       +         ++ +L
Sbjct: 164 FKEAHTVHVDREDAERQVREAVEIYKKIFDEMCLAYMINKRPDWDKFAGAEYTIAFDTVL 223

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLE 366
                 +       G+          ++    + +  T       R I A+         
Sbjct: 224 PDGRTLQIGTVHYLGTNFTRVFEVTYLAADGTRRLAHTTSYGISERSIAAMLITHGDDAG 283

Query: 367 SSTNNIKEMGPVLITTMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +          V+I  + +  +     +S  +   + LR AG+R  +     K  G +  
Sbjct: 284 TVLPPRLAPIQVVIVPIFYGEEEAASVISYAREVEKALREAGMRVHIDDRPDKTPGWKFY 343

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           + + +  PL +  G  +  +  + I                   R   + +  + + ELV
Sbjct: 344 FWELKGVPLRVEVGKRDLEKRQVVI------------------TRRDTLEKYAVGLGELV 385

Query: 483 STVKKILQENKEEI 496
             V+ +++  +E +
Sbjct: 386 DAVRGLMRTVEENL 399


>gi|71899804|ref|ZP_00681954.1| TGS [Xylella fastidiosa Ann-1]
 gi|71730395|gb|EAO32476.1| TGS [Xylella fastidiosa Ann-1]
          Length = 332

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 2/69 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   I + IR +Y N G+  +  P +       K     D   + +F  
Sbjct: 263 GLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQILDVSLWQKS-GHWDNYKENMF-F 320

Query: 74  QDDDGQWIS 82
            D + +  +
Sbjct: 321 TDSEKRTYA 329


>gi|320535809|ref|ZP_08035890.1| glycyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320147357|gb|EFW38892.1| glycyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 452

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 21/128 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              + +     V +  +          +     LR+   + +  L  +   G + +  D 
Sbjct: 345 LRFHPLIAPITVAVLPLMKKDGLAELAEEIRNELRSE-FKTDFDLSGA--IGKRYRRQDE 401

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I      +  G + ++                      + QI IP SE+V+T++
Sbjct: 402 AGTPFCITVDYDSKKDGTVTLR------------------FRDSMEQIRIPRSEIVNTIR 443

Query: 487 KILQENKE 494
           + ++  K 
Sbjct: 444 QAIKNYKR 451


>gi|301629493|ref|XP_002943874.1| PREDICTED: prolyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 657

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 36/102 (35%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++   +R   +  G      P+++ ++ L +     ++    +  +
Sbjct: 38  GIYSYMPMGLRVIRKVEAIVREEMDRAGAAECAMPVVQPAE-LWQETGRFEKMGPELLRI 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +D   +   ++    ++   +AR    ++  +       +  
Sbjct: 97  KDRHDRDFVVQPTSEEVVTDIARQELRSYKQLPRNFYQIQTK 138


>gi|297588366|ref|ZP_06947009.1| threonine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573739|gb|EFH92460.1| threonine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 634

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + + N +   ++    + G+  I+TPL+   D L       D   + ++  
Sbjct: 261 GFPFFHPNGMVVLNELEKFLKEQLLDRGYGQIKTPLILNED-LWHQSGHWDHYKENMY-F 318

Query: 74  QDDDGQWISLRYDLTAP 90
              DG   +++      
Sbjct: 319 TQIDGDDYAIKPMNCPG 335



 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 23/115 (20%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFG---NQLKYADRRNC 429
            + P+ +  +              Q ++  G+R ++   S K       +QLK  +    
Sbjct: 534 WLSPIQVEILPISDKFNDYAYELQQKMKARGLRVKVDDRSEKIGLKIRESQLKKVN---- 589

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
             ++I G  E     + ++    G   S+                   I ELV  
Sbjct: 590 -YSLIIGQNEIDNNEVSVRKRDLGDVGSKNTDEF--------------IDELVDE 629


>gi|88802133|ref|ZP_01117661.1| prolyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782791|gb|EAR13968.1| prolyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 492

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 22/135 (16%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  D   L     K  M+ + LR  G   +     +   G + 
Sbjct: 291 GLVLPPKLAPIQVVIVPIYKDETQLQAISDKVAMFVKELRAKGASVKFDDRDTYRPGAKF 350

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + +  P+ I  G+ +   G +++                   R     + T+   E+
Sbjct: 351 AEYELKGVPVRIAIGSRDLENGTVEV------------------ARRDTFEKQTVAQDEV 392

Query: 482 VSTVKKILQENKEEI 496
           VS V  +L++ ++ +
Sbjct: 393 VSFVLDLLEKIQQNL 407


>gi|332187352|ref|ZP_08389090.1| threonyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332012513|gb|EGI54580.1| threonyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 664

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/461 (10%), Positives = 123/461 (26%), Gaps = 77/461 (16%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RI   +   +R   +  G+  ++TP +  +    +      +  + +F +
Sbjct: 269 GSVFWHPKGYRIWRELEAYMRRAIDATGYREVKTPQVMDARQ-WEQSGHWGKYRENMFVI 327

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D+                                    P   +E        Q++    
Sbjct: 328 PDE-----------------------------------VPNTEDEGPLVSDDAQWMA--- 349

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +      A   +      +   + ++   Y  G  +R    G L  +      +  + 
Sbjct: 350 --LKPMNCPAHVLIFRQGIKSYRDLPLRF--YENGCCHRNEPHGALHGLMRV--RQFTQD 403

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
              +   +      ++    L      D    ++    L  E+            E+   
Sbjct: 404 DAHIFCREDQIVEEVRAFCELADRIYKDFGFTYSIKLALRPEKR--------FGTEEMWD 455

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           +  E ++  +       E     EL  +  + + +++   T   G  +  G +    +  
Sbjct: 456 QAEEELRNAVVAAGLATEQYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLP 515

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             ++                      R +   +    F      + + ++          
Sbjct: 516 ERLDASYIGED-------------GERHRPIMLHRAIFGSYERFIGILIEHYAGRFPVWL 562

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR----NC 429
                ++ T+  D+D  ++          AGIR E  L + K     + Y  R       
Sbjct: 563 APVQAVVATIVSDADGYAEEAAAKLA--AAGIRVETDLRNEK-----INYKVREHSVAKV 615

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           P+ ++ G  E   G + ++ L    +    +    +     
Sbjct: 616 PVLLVVGKREAEEGKVAVRRLGSQAQEVMTLDEAIATLRGE 656


>gi|325123334|gb|ADY82857.1| prolyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 571

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 44/160 (27%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + SL +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPA-SLWEESGRYEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D       L     ++   +AR   +++  +          +R     R   
Sbjct: 90  GPELLRFKDRHTNPFVLGPTHEEVITDMARNELKSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLG 189


>gi|320109353|ref|YP_004184943.1| threonyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319927874|gb|ADV84949.1| threonyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 676

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 33/90 (36%), Gaps = 1/90 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ I  +       +  +   + L   G+R  +    ++    +++    +  P  +
Sbjct: 573 WLAPIQIGLVPISEKHTAYAETVKKELEAIGLRVTLD-ARNEKMNAKIRDLTLQKVPFVL 631

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           I G  E     + ++   KG E S  + + 
Sbjct: 632 IMGDKEAEAKAVSVRTRGKGDEGSTPLADF 661



 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 1/78 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G          IR  + D +R+     G+D + TP +   +       +     + +++
Sbjct: 293 SGLIFWHPNGAIIRKTMEDWMRDECLRRGYDLVVTPHVMRRELWQISGHEG-FYGQNMYA 351

Query: 73  LQDDDGQWISLRYDLTAP 90
             + D     L+      
Sbjct: 352 PMELDDAEYRLKPMNCPG 369


>gi|45357775|ref|NP_987332.1| glycyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|59798541|sp|Q6M0Q7|SYG_METMP RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|45047335|emb|CAF29768.1| glycyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 574

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 32/116 (27%), Gaps = 20/116 (17%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  + +              LR  G+ AE     S   G +    D    P  I
Sbjct: 479 SPIKVGVFPLVNKEGMPEIAMDLKNKLRENGLIAE--YDDSGAIGRRYMRMDEVGTPFCI 536

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
                      + I++    ++                    IPI+E+V  +K  L
Sbjct: 537 TIDGETLKDRSVTIRERDSREQ------------------FRIPINEVVPYIKDKL 574



 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++N ++++ R  Y  N GF  I++P +   + L    
Sbjct: 29 GFFDYGPLGAILKNNVINTWRKHYIVNEGFYEIDSPTVTPYEVLKASG 76


>gi|330979516|gb|EGH78119.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 172

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 4/114 (3%)

Query: 47  TPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-ARYVAENFDTIVFP 105
            P L   D+  +     +     +++ +D  G+   L  + TA    R  +E        
Sbjct: 1   MPALWGQDTFIEKAGGSEIIG-QMWAFEDKAGRPCCLIPEATALFQER--SEALLEGRRE 57

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
              + +   +R E+   GR+R+F Q  ++ +G S + A      +    L+++G
Sbjct: 58  ALFFYVARCYRYERPQAGRYREFTQLGLEILGPSPQQALLRSQAICTGFLDSLG 111


>gi|302186308|ref|ZP_07262981.1| tRNA synthetase, class-II (G, H, P and S) [Pseudomonas syringae pv.
           syringae 642]
          Length = 173

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 4/114 (3%)

Query: 47  TPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL-ARYVAENFDTIVFP 105
            P L   D+  +     +     +++ +D  G+   L  + TA    R  +E        
Sbjct: 1   MPALWGQDTFIEKAGGSEIIG-QMWAFEDKAGRPCCLIPEATALFQER--SEALLEGRRE 57

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
              + +   +R E+   GR+R+F Q  ++ +G S + A      +    L+++G
Sbjct: 58  ALFFYVARCYRYERPQAGRYREFTQLGLEILGPSPQQALLRSQAICTGFLDSLG 111


>gi|291515023|emb|CBK64233.1| prolyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 494

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/255 (12%), Positives = 69/255 (27%), Gaps = 31/255 (12%)

Query: 255 LYELVKGTIAGEKGFNELVVIS----ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E   +     +   +       +   S   R          EA+
Sbjct: 173 WQEGHTAHATREEAVEEAEKMIRVYRKFAEEWMSLPVVVGHKSPNERFAGAEDTLTIEAL 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           V++               +RL+ AL      + 
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKAFDVQYVNKEGKLEYVWATSWGVSTRLMGALIMAHSDNN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V++  +    + L++           LR  GI  ++    +   G + 
Sbjct: 293 GLVLPPKLAPIQVVMVPIYKTPEQLAEICARFGAIAAELRDKGISVKIDDRDNVRPGFKF 352

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + +  P+ +  G  +   G +++                   R   + + TI    L
Sbjct: 353 AEYELKGVPVRLAMGGRDLENGTIEL------------------VRRDTLEKQTISQEGL 394

Query: 482 VSTVKKILQENKEEI 496
           V  ++ ++ E +E I
Sbjct: 395 VERIEGLMAEIQENI 409


>gi|38234279|ref|NP_940046.1| glycyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200542|emb|CAE50237.1| glycyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 461

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/474 (8%), Positives = 97/474 (20%), Gaps = 62/474 (13%)

Query: 14  GFA---DCPTKEIRIRNRILDSIRNIYENYGFDPI--ETPLLEYSDSLGKFLPDEDRPNK 68
           G     D     + ++  I       +     D +  ++ ++                  
Sbjct: 29  GTRSAWDYGPLGMELKENIKKQWWRTFVQARADVVGLDSSIILPRQVWVASGH------- 81

Query: 69  GVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
            V +  D              PL   +  +                        G     
Sbjct: 82  -VATFTD--------------PLVESLHTHKRYRADHLIEAYEAKH--GHAPENGLADVP 124

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
                     +     + +          +G   N+  +     +   GI          
Sbjct: 125 DPETGQPGNWTEPQMFSGLMKTY------LGPVDNEQGLHYLRPETAQGIFVNFKNVMTT 178

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
              +    +    ++ K     +       RT           +  E  D   +    D 
Sbjct: 179 ARMKPPFGIA---QVGKSFRNEITPGNFIFRTREFEQMEIEYFVPEELADQKFNEWVDDC 235

Query: 249 EK---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                 +    + ++     E+        +  +                   +      
Sbjct: 236 WNWFVDLGINPDNMRRFDVPEEDRAHYSKGTIDMEYKFGFQGNP-----WGELMGVANRT 290

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            Y+  LG  +    +    F    G      ++    G       F +       A  + 
Sbjct: 291 DYD--LGCHIKESGEDLSYFDQTTGERYVPWVIEPSFGLTRALMAFLVDAYCEDEAPNAK 348

Query: 366 E-------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKN 416
                      +       V +  +          +     LR         +   +S  
Sbjct: 349 GGVDKRVVLKLDPRLAPVKVAVLPLSKKDTLTPVAEEVAAKLRQFWN-----VDYDTSGA 403

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            G + +  D    P  +           + +++     +    + + +S+  AR
Sbjct: 404 IGRRYRRQDEIGTPFCVTVDFDTLEDNAVTVRERDTMTQERVALADLQSYLAAR 457


>gi|292488129|ref|YP_003531006.1| threonyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899340|ref|YP_003538709.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199188|emb|CBJ46302.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553553|emb|CBA20598.1| Threonyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312172261|emb|CBX80518.1| Threonyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 642

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/339 (12%), Positives = 92/339 (27%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +EL   SE    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDELWDRSETDLAAALKENGIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYVGESNERQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P+ +  M+            T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPLQVVVMNITDGQSEYVAELTRKLQNAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++    +  +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSIDVNEAIAKLQDEI 632



 Score = 36.7 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/155 (6%), Positives = 38/155 (24%), Gaps = 3/155 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRTKLKEYEYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                      +     + ++   +   ++ V   
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDM 407


>gi|149183345|ref|ZP_01861783.1| glycyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848942|gb|EDL63154.1| glycyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 455

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/231 (7%), Positives = 50/231 (21%), Gaps = 8/231 (3%)

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISEL---VRKSGYNSNRIKISSTIVRGLEY 301
            ++      E  +    T+  ++    L    +       +       K           
Sbjct: 229 DLEWHSYWREFCKNWLLTLGMKEDNMRLRDHDDDELSHYSNATTDIEYKFPFGWGELWGI 288

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                ++        NE                   +    G +     +          
Sbjct: 289 SDRTDFDLKRHMEHSNEDFH--YMDPQTNEKFVPYCIEPSLGADRVTLAYLCDAYEEEEL 346

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +       + P     +        +     + L        +    + + G + 
Sbjct: 347 ENEKRTVLRFHPALAPFKAAVLPLSKKLSDEAFKVYEELSK---DLMVDFDETASIGKRY 403

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  D    P  I         G + ++D     ++   I   +++ E ++ 
Sbjct: 404 RRQDEIGTPFCITFDFDSVEDGQVTVRDRDTMDQVRMPISEVKNFLEEKIQ 454


>gi|310767522|gb|ADP12472.1| threonyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 642

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/339 (12%), Positives = 91/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +             +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDTYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G ++L   SE    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDLWDRSEADLAAALKENDIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++    +  +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSIDVNEAIAKLQDEI 632



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH 371


>gi|304384417|ref|ZP_07366823.1| proline--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304334515|gb|EFM00802.1| proline--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 493

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 50/132 (37%), Gaps = 26/132 (19%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V++  +  +++ LS      +   + LR  GI  ++    +K  G   
Sbjct: 293 GLVLPPKLAPIQVVVIPIARNAEQLSAIDERLRPVIEGLRKLGISVKLDDADNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+AD   +  P+ ++ G  +   G +++                   R   + + T+PI 
Sbjct: 351 KFADYELKGVPVRLVMGGRDLENGTIEL------------------MRRDTLEKETLPIE 392

Query: 480 ELVSTVKKILQE 491
            +VS ++ +L E
Sbjct: 393 GIVSHIQTLLDE 404


>gi|259908578|ref|YP_002648934.1| threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964200|emb|CAX55707.1| Threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478547|emb|CAY74463.1| thrS [Erwinia pyrifoliae DSM 12163]
          Length = 642

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/339 (12%), Positives = 91/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +             +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDTYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G ++L   SE    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDDLWDRSEADLAAALKENDIPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLNASYVGESNERQVPVMIHRAILGSMERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++    +  +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSIDVNEAIAKLQDEI 632



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRTKLKEYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
            + +F+    + +   ++        +   +   +    P R    G   RNE  G   
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH 371


>gi|297571270|ref|YP_003697044.1| glycyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931617|gb|ADH92425.1| glycyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 464

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 28/93 (30%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +   +D     +     LR      +     +   G + +  D    P  +    
Sbjct: 371 VAVLPLSRSADLSPMARELAAKLRKH-WNVDFD--DAGAVGRRYRRQDEIGTPFCVTVDF 427

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + I+D    +++   +   E++   +
Sbjct: 428 DSLEDQAVTIRDRDTMEQVRIPLAEVEAYLAGK 460


>gi|262371768|ref|ZP_06065047.1| prolyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262311793|gb|EEY92878.1| prolyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 571

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 42/154 (27%), Gaps = 8/154 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + +L +     ++ 
Sbjct: 31  MIRKLASGLYSWLPMGTRVLKKVDAIVREEMNRSGALEVFMPVTQPA-ALWEESGRFEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
              +   +D       L     ++   LAR    N                 +       
Sbjct: 90  GPELLRFKDRHTNDFVLGPTHEEVITDLAR----NELKSYKQLPLNFYQIQTKFRDEIRP 145

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           RF      +     + +  A+ E      D +  
Sbjct: 146 RFGVMRSREFIMKDAYSFHANQESLQETYDVMYD 179



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 26/103 (25%), Gaps = 3/103 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSD--SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V I  M+      +L   +     L+  G    +   + +  G +
Sbjct: 464 DDKGIIWPQAIAPFEVAIVPMNAHKSPRTLEAAEALYAELQAQGYDVLLDDRNER-PGVK 522

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               +    P  I+ G      G  + K     +  +   +  
Sbjct: 523 FSDLELMGIPHRIVIGEKGLDAGTFEYKGRRDEESTNLSKEEL 565


>gi|320528402|ref|ZP_08029564.1| prolyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131316|gb|EFW23884.1| prolyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 561

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 55/189 (29%), Gaps = 28/189 (14%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           E ++ F    E       G+          + +         G         +A  + ++
Sbjct: 394 EGVVHFAHGIEVGNTFKLGTKYSKALDLQYLDQNNQLQYVWMGSYGIGPARAMAALAEQN 453

Query: 368 -------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                     ++      ++     D + +         L+  GI   +     +  G +
Sbjct: 454 ADENGINWPKDLAPFQVAVVIISMKDEEQVRIGNELHDELQAQGIEVVLDNRDER-PGVK 512

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
            K  +    P  I  G    + G +++K    G+                   + +P++E
Sbjct: 513 FKDMELIGIPFRITVG-RGVADGKVELKS-RTGE------------------SMEVPVTE 552

Query: 481 LVSTVKKIL 489
            +  +K++L
Sbjct: 553 AIDKLKELL 561



 Score = 41.4 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 35/127 (27%), Gaps = 13/127 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M KK+        G         R+ ++I   IR+         +  P L   +      
Sbjct: 31  MIKKSS------AGVYMMLPMGNRVLSKIYAIIRDEMNKIDCQELSMPSLIPEEVYV-SS 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRN 117
                  KG+FSL+D  G    L     +L    A        +      +         
Sbjct: 84  GRRAGFGKGMFSLEDRKGVPYVLGPTHEEL---FAMAAKMQIRSYKDMPFSLYQIQTKFR 140

Query: 118 EKHGPGR 124
           ++  P  
Sbjct: 141 DEPRPRY 147


>gi|326568855|gb|EGE18925.1| prolyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 572

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 41/157 (26%), Gaps = 8/157 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +R+  R+   +R   E      +  P+ +  + L       +     
Sbjct: 34  KLASGLYVWMPMGLRVLKRVERIVREEMEKIDSQELLMPVTQPGE-LWHESGRWEDYGAE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +   +D   +   L     ++   +AR   +++  +          +R     R      
Sbjct: 93  LLRFKDRHSRDFVLGPTHEEVITDIARNELKSYKQLPITFYQIQTKFRDEIRPRFGVMRA 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F             S      +M          +G
Sbjct: 153 REFTMKDAYSFHIDKESLANTYQDMYDAYNRIFTRLG 189



 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 35/112 (31%), Gaps = 5/112 (4%)

Query: 354 GISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
                 +     E   ++I      ++     D D+ +K Q   Q L+  GI   +    
Sbjct: 460 NHDDNGIIWAEPEDKADSIAPFYVAIVPMKSKDGDAEAKAQSLYQTLKARGINVLLDDRD 519

Query: 414 SKNFGNQLKYADR--RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +     +K+AD      P  I+      +    +  + A G +    +   
Sbjct: 520 ER---AGVKFADLELIGIPHRIVVSQRNLAENKYEYTNRATGDQQMLSLDEL 568


>gi|288940715|ref|YP_003442955.1| threonyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896087|gb|ADC61923.1| threonyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 639

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 67/238 (28%), Gaps = 14/238 (5%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     L SE   ++        +     +   +        G +EL   +E   
Sbjct: 384 DDAHVFCTEDQLQSEVATLIDMVFETYRDFGFDAIDLALSLRPEQRVGADELWDKAEAAL 443

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYD 335
               +   +        G  Y     +        +    +              G  Y 
Sbjct: 444 AQSLDDKGLTYRIQPGEGAFYGPKIEF---TLHDSIGRAWQCGTIQVDFSMPGRLGAHYI 500

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSL--ESSTNNIKEMGPVLITTMDHDSDSLSKY 393
              +  +   +        + R I  L           +  +  V +   D  +D + + 
Sbjct: 501 AEDNSKQTPVMIHRAVLGSVERFIGILIEHYAGLLPVWLAPVQAVALNITDRQADYVKE- 559

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
               + LR  G RAE  L  ++  G +++    +  P  ++ G  E     L ++D  
Sbjct: 560 --VVKTLRDKGFRAEFDL-RNEKIGFKIREHTLQRVPYLLVVGDREVETRSLSVRDRQ 614



 Score = 41.0 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 52/176 (29%), Gaps = 10/176 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   +       +R   + YG+  +ETP +       +     D+   G+F+ 
Sbjct: 264 GMAFWHAKGRVVYRLAETYMREKLDEYGYQEVETPQVLDRSLWERS-GHWDKFAGGMFTT 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D +  +++             +        ++YR  P+   E  G     +      
Sbjct: 323 H-LDDRDFAIKPMNCPG-------HIQLYNQGLKSYRDLPLRLAEF-GVVHRNEPSGTLH 373

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
             + +   T D        D L++      D           D I   + L  + +
Sbjct: 374 GLMRARRFTQDDAHVFCTEDQLQSEVATLIDMVFETYRDFGFDAIDLALSLRPEQR 429


>gi|221118771|ref|XP_002157095.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 204

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/116 (10%), Positives = 38/116 (32%), Gaps = 2/116 (1%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       + + V      +G    ++A+ +          + P+    +   +     
Sbjct: 57  TYVSGEGDDQKRPVIIHRAILGSVERMIAILTENYGGKWPFWLSPIQAVVIPVSNKFDEY 116

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   + L     R ++ L + +    +++ A   +    ++ G  E +   + ++
Sbjct: 117 AQKVHRFL--QDFRVDVNLDAGETLNKKIRNAQLMHYNFILVVGDKEMTSNTVNVR 170


>gi|126460233|ref|YP_001056511.1| glycyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126249954|gb|ABO09045.1| glycyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 588

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 4/107 (3%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +    D ++  +   + L + G             G++    D    PLA+     
Sbjct: 481 CILPIVKREDYVAIGKRLMRELASEGFLV--HYDDEGTIGSRYAACDEVGTPLAVTIDER 538

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
               G + I+D    +++  +  +   +         +P  +    +
Sbjct: 539 TPVDGTVTIRDRDTRRQVRVKTSDVARFAALVRGG--VPFDKAAEAL 583



 Score = 39.8 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 5/51 (9%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFD----PIETPLLEYSDSLGKFL 60
          GF D     ++IR  I++  R  +    +      +ETP++          
Sbjct: 32 GFYDFGPLGVQIRRNIVEKWRRTFVLP-YQDFIVEVETPIIMPEPVFKASG 81


>gi|119573935|gb|EAW53550.1| threonyl-tRNA synthetase-like 1, isoform CRA_c [Homo sapiens]
          Length = 344

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 11/111 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     V+I       +   + Q   Q LR AG+ +++   S      +++ A 
Sbjct: 231 GKWPLWLSPFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQ 287

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
             +     + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 288 LAHYNFQFVVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 330


>gi|114559275|ref|XP_001168898.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 7 [Pan
           troglodytes]
          Length = 636

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 11/111 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     V+I       +   + Q   Q LR AG+ +++   S      +++ A 
Sbjct: 523 GKWPLWLSPFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQ 579

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
             +     + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 580 LAHYNFQFVVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 622


>gi|114559271|ref|XP_001168925.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 8 [Pan
           troglodytes]
          Length = 701

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 11/111 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     V+I       +   + Q   Q LR AG+ +++   S      +++ A 
Sbjct: 588 GKWPLWLSPFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQ 644

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
             +     + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 645 LAHYNFQFVVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 687



 Score = 46.8 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y + GF  ++TP L +S  L +     +   + +F++Q   
Sbjct: 324 FLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTL-FSTKLWEQSGHWEHYQEDMFAVQ-HI 381

Query: 78  GQWISLRYDLTAPLARYVAEN 98
              ++L+           A  
Sbjct: 382 TDTLALKPMNCPAHCLMFAHR 402


>gi|114559285|ref|XP_001168667.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 1 [Pan
           troglodytes]
 gi|55958998|emb|CAI15490.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
          Length = 443

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 11/111 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     V+I       +   + Q   Q LR AG+ +++   S      +++ A 
Sbjct: 330 GKWPLWLSPFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQ 386

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
             +     + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 387 LAHYNFQFVVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 429


>gi|12224878|emb|CAC21664.1| hypothetical protein [Homo sapiens]
          Length = 235

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 11/111 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     V+I       +   + Q   Q LR AG+ +++   S      +++ A 
Sbjct: 122 GKWPLWLSPFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQ 178

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
             +     + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 179 LAHYNFQFVVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 221


>gi|114559281|ref|XP_001168852.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 5 [Pan
           troglodytes]
 gi|10434068|dbj|BAB14117.1| unnamed protein product [Homo sapiens]
 gi|55958997|emb|CAI15489.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|119573934|gb|EAW53549.1| threonyl-tRNA synthetase-like 1, isoform CRA_b [Homo sapiens]
          Length = 588

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 11/111 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     V+I       +   + Q   Q LR AG+ +++   S      +++ A 
Sbjct: 475 GKWPLWLSPFQVVVIPVGSEQEEYAKEAQ---QSLRAAGLVSDLDADSGLTLSRRIRRAQ 531

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
             +     + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 532 LAHYNFQFVVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 574



 Score = 37.9 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
           R+++    +  Y + GF  ++TP L +S  L +     +   + +F++Q   
Sbjct: 202 RDQLRQLFKAEYAHRGFSEVKTPTL-FSTKLWEQSGHWEHYQEDMFAVQPPG 252


>gi|154686074|ref|YP_001421235.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166980099|sp|A7Z4S8|SYP_BACA2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|154351925|gb|ABS74004.1| ProS [Bacillus amyloliquefaciens FZB42]
          Length = 564

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 4/101 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+   I   +R   E      +  P L+ +++  +           +  
Sbjct: 37  SGVYSYMPLAYRVIQNIQKIVREEMEKINAVEMLMPALQQAETWQES-GRWYTYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR 110
           L+D  G+  +L     ++   L R   +++  +       +
Sbjct: 96  LKDRHGREFALGATHEEVITSLVRDEVKSYKRLPLTLYQIQ 136



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/109 (9%), Positives = 35/109 (32%), Gaps = 3/109 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          + I  ++  +++  +  +      +  G    ++   ++  G + 
Sbjct: 458 DEKGLIWPKSVAPYDLHILALNMKNEAQKELAEQLYGKFQAEGYEV-LYDDRAERAGVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             +D    P+ I  G      G++++K    G+     +     + + +
Sbjct: 517 ADSDLIGLPIRITVGKR-ADEGIVEVKIRKTGESAEVSVDELSEFIKTK 564


>gi|305433094|ref|ZP_07402250.1| proline--tRNA ligase [Campylobacter coli JV20]
 gi|304443795|gb|EFM36452.1| proline--tRNA ligase [Campylobacter coli JV20]
          Length = 569

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 35  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 89

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 90  FGKELLRFKDRKENEFVLGP 109



 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 2/106 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +      +I +   D  SL       + L  AGI   +   + + FG ++   + 
Sbjct: 466 IWNKTLAPFTLEIIISNIKDEKSLEFATKLYEDLSNAGIEVLLDDRNER-FGVKMNDFEL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P A++ G G   +  L+  D    ++     K    + +  V 
Sbjct: 525 MGFPYALVVGKG-LEKDELEFIDRKTLEKKIISSKEVFDFIKKSVE 569


>gi|302409932|ref|XP_003002800.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358833|gb|EEY21261.1| threonyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 104

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G         RI NR++D +R  Y +YGF+ + TP + Y  SL +           ++++
Sbjct: 8  GSPIFLPNGARIFNRLVDFLRRQYVSYGFEEVITPNI-YKKSLWEVSGHLQNYADDMYTV 66

Query: 74 QDD 76
             
Sbjct: 67 TSR 69


>gi|254470004|ref|ZP_05083408.1| threonyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211960315|gb|EEA95511.1| threonyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 648

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/378 (12%), Positives = 106/378 (28%), Gaps = 12/378 (3%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +                   + +      Q +   +       E     M     +    
Sbjct: 267 HHKGWQLFQNLTNYMRRRLEDDYQEVNAPQILDKALWETSGHWEWYRENMFATETEDHRV 326

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
             IK  +    +   K        + L    ++ E   V R        GL  V+    +
Sbjct: 327 FAIKPMNCPGHVQIFKHGLKSYRDLPL----RMAEFGAVSRYEPSGALHGLMRVRAFTQD 382

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
                  +    A        IM  +     E+ + +L    +  +  ++ ++    +  
Sbjct: 383 DAHVFCTEEQMAAECHKINDLIMSVYKDFGFEEIVVKLSTRPEKRVGSDEVWDHAEAVMG 442

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY--- 334
            V K    ++  KI + I+ G   + G  +E  L   +  E Q            R+   
Sbjct: 443 EVLKEIEANSGGKIKTGILEGEGAFYGPKFEYTLRDAIGREWQCGTTQVDFNLPERFGAF 502

Query: 335 --DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
             D    + +   +           L + +++              ++  +  D+D    
Sbjct: 503 YVDSDGEKKQPVMIHRAICGSLERFLGILIENFAGHFPLWLAPQHFVVAAITSDAD--DY 560

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L+ AG+R E+ L  ++    +++       P+ I  G  E     + I+ L  
Sbjct: 561 AKEVHAALKKAGLRGELDL-RNEKINYKVREHSHAKIPVIIAVGKREAEEKTVSIRRLGS 619

Query: 453 GKELSREIKNNESWREAR 470
             + +  +    +     
Sbjct: 620 RNQTAMTLDEAVASLRDE 637


>gi|315586236|gb|ADU40617.1| proline--tRNA ligase [Helicobacter pylori 35A]
          Length = 577

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 88/295 (29%), Gaps = 14/295 (4%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +++    L          L+ VK L        ++ +  + +    +   ++  F+    
Sbjct: 286 IHKDKETLACFFVRGDDNLEEVKALNALNLLGASALELREASQKDLDNAGLIAGFIGPYG 345

Query: 249 EK---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            K   S     E +K       G NE    +  V   G+ +        +          
Sbjct: 346 LKKHVSYIIFDEDLKEGDCLIVGANEKDFHAVGVDLKGFENLVYADIVQVKESDHCPNCQ 405

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +    K     +      +     + +   +   G  I  SRL+ A+   
Sbjct: 406 GALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGI--SRLLSAILEQ 463

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +        T N      V++ +   D           + LR  G+ A +    ++ FG 
Sbjct: 464 KSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDAR-FGA 522

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
           +++  +     LA+I G         + IK     K+  ++ +  E   E   ++
Sbjct: 523 KMRDFELIGERLALIIGKQTLESKEFECIKRANLEKQTLKDTELEEKILEMLESE 577



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|300778952|ref|ZP_07088810.1| proline--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300504462|gb|EFK35602.1| proline--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 545

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 57/220 (25%), Gaps = 23/220 (10%)

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           R          EA++      +       G            ++               +
Sbjct: 270 RFAGADETYCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFTNKEGKIEHAWATSWGTST 329

Query: 357 RLIVAL-----KSLESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRA 407
           RL+ AL                    V+I  +    + L +           LR  GI  
Sbjct: 330 RLMGALIMTHSDDFGLVLPPTLAPIQVVIVPIFKGEEQLEQISEVALDIQAKLRAKGISV 389

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNES 465
           +    +    G +    + +  P+ I  G  +     ++I  +D    +  S E  ++  
Sbjct: 390 KFDNDTQNKPGWKFAEYELKGVPVRIAMGPRDLENKSVEIARRDNLTKEVRSIEGLDSYI 449

Query: 466 WREARVAQIT------------IPISELVSTVKKILQENK 493
               +  Q              I   +     KK+L+E  
Sbjct: 450 EDLLKTIQQDIYNKAFEFRKNNITKVDTYEEFKKVLEEKG 489


>gi|213022828|ref|ZP_03337275.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 167

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 1/110 (0%)

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           + + E +      + PV +  M+            TQ L+ AGIR +  L  ++  G ++
Sbjct: 49  ILTEEFAGFFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKI 107

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           +    R  P  ++ G  E   G + ++        S ++ +     +  +
Sbjct: 108 REHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 157


>gi|119953497|ref|YP_945706.1| threonyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254783510|sp|A1R0E4|SYT_BORT9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119862268|gb|AAX18036.1| threonyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 583

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 36/99 (36%), Gaps = 2/99 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +  ++             +  GIR ++    +     +++    +  P   I G  
Sbjct: 485 QVVIIPVNNIVEEYALEVLSRFKKEGIRIKLDNDCNMRMNAKIRQYQSQKVPYMFIVGEK 544

Query: 439 ERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQITI 476
           E   G + I+     ++++  E+K    + + +V+   I
Sbjct: 545 EVVEGKISIRT-RTNEQINGLELKEALEFVKLKVSNKEI 582


>gi|126321714|ref|XP_001373481.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 723

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 46/147 (31%), Gaps = 4/147 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ +          + P  +  +         
Sbjct: 574 TYVSHDGDDKKRPVIIHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEY 633

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   Q    A +  +  L        +++ A        ++ G  E++ G + I+    
Sbjct: 634 AQKVQQQFHNANLMTDSDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKTSGTVNIRTRDN 693

Query: 453 ---GKE-LSREIKNNESWREARVAQIT 475
              G+  +S  I+  +  ++ R  Q  
Sbjct: 694 KVHGERTVSETIERLQQLKQTRSKQAE 720



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IRN Y   GF  + TP + Y+  L          ++ +FS + + 
Sbjct: 345 FMPKGAYIYNTLVEFIRNEYRKRGFQEVVTPNI-YNSKLWLTSGHWQHYSENMFSFEVEK 403

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 404 -EIFALKPMNCPG 415


>gi|159045494|ref|YP_001534288.1| ATP phosphoribosyltransferase regulatory subunit [Dinoroseobacter
           shibae DFL 12]
 gi|157913254|gb|ABV94687.1| hypothetical protein Dshi_2954 [Dinoroseobacter shibae DFL 12]
          Length = 368

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/375 (15%), Positives = 106/375 (28%), Gaps = 54/375 (14%)

Query: 27  NRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD-DGQWISLRY 85
             +   +   + + G  P+E  +L+ +++L     +  R     +   D   G+ + LR 
Sbjct: 8   RAVAARLFAAFLDAGAVPVEADILQPAETLLDLYGETIRHRA--YVTADPVRGEQM-LRP 64

Query: 86  DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA 145
           D T P+   V  +      P R    G VFR ++ G  R R+F+Q   +    +   A  
Sbjct: 65  DFTVPV---VQMHMAGGAEPARYAYAGEVFRKQEAGVERPREFLQVGYEVFDGADPAAAD 121

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
                    L             I +  IL   +  +    + K   R  + R       
Sbjct: 122 AEVF----ALLRAQFGAIPTRPVIGDIAILRAAISGLSTTDERKAALRRHIWRPRRFRAL 177

Query: 206 FGLQGVKLLLGEGRT----------------------------------DNSGDFTKGAN 231
               G +L + EGR                                   +          
Sbjct: 178 LDRFGGRLPVPEGRRALARAVADRGVAEVLAAHGPDMGLRSPAEVLARVETLQADLAAPP 237

Query: 232 LTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
           + + ++ ++     L      ++  L +L           + L    + +   G     +
Sbjct: 238 IPAAEVAVLEDISRLRESAPMALERLRDLAVDIPELTPALDGLEARLDALAALGQTPETL 297

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           +   T  R          E   GF      +       V  GGRYD L +          
Sbjct: 298 EFDGTYGRA-------SLEYYDGFVFGIFARARPHMAPVASGGRYDALTAVLGQGRAIPA 350

Query: 350 GFSIGISRLIVALKS 364
              +    L+  L+ 
Sbjct: 351 VGGVIRPGLLAQLEE 365


>gi|118102209|ref|XP_001233746.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 510

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 3/106 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR+ Y+  GF+ + TP + +S  L +        +  +FS     
Sbjct: 285 FLPRGAHIYNTLVDFIRSEYQVRGFNEVVTPNI-FSPRLWELSGHWQHYSAHMFSFT-AG 342

Query: 78  GQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGP 122
            + +SL+           A    +    P R    G + RNE  G 
Sbjct: 343 TETLSLKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRNEPPGS 388


>gi|88597079|ref|ZP_01100315.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88190768|gb|EAQ94741.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|315927040|gb|EFV06395.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 568

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 34  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 88

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 89  FGKELLRFKDRKENEFVLGP 108



 Score = 37.5 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 48/156 (30%), Gaps = 22/156 (14%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLS 391
            +   S+         G S  ++  I A    +    N      VL   +    D  +L 
Sbjct: 430 DENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCIWNKTLAPFVLEIIVSNLKDEKALE 489

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 + L   G+   +   + + FG ++   +    P A++ G G      +++    
Sbjct: 490 FANKLYRDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVIGKG-LENNEIEL---- 543

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
                          +   + +  I   EL+  +KK
Sbjct: 544 --------------IQREGLVKELIKTDELMEILKK 565


>gi|291522045|emb|CBK80338.1| prolyl-tRNA synthetase, family I [Coprococcus catus GD/7]
          Length = 477

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/244 (9%), Positives = 68/244 (27%), Gaps = 26/244 (10%)

Query: 255 LYELVKGTIAGEKGFNELVVIS----ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+       +     +   +           +   +          EA+
Sbjct: 162 WQEGHTAHATAEESKERTEQMLNLYADFCEQVLAMPVIRGQKTEKEKFAGAEATYTIEAL 221

Query: 311 LGFPVMNEKQKPVVFGSVGGGG---RYDGLVSRFKGQNVPATGFSIGISRLIVAL--KSL 365
           +      +      FG         +Y    ++ +  +  + G +  +   I+ +     
Sbjct: 222 MHDGKALQSGTSHNFGDGFARAFGIQYTDKENKLQYVHQTSWGMTTRLIGAIIMVHGDDN 281

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKY 423
                 +     V++  +    + +       + LR    G R ++    +K  G +   
Sbjct: 282 GLVLPPMIAPTQVIVIPIAQHKEGV---LEKAEELRDRLSGFRVKLDATDNK-PGWKFAE 337

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           A+ R  P+ +  G  +       +     G+++   +   E+            + EL+ 
Sbjct: 338 AEMRGIPVRVEIGPKDIEANQAVLARRDTGEKIVVSLDELET-----------KVDELLK 386

Query: 484 TVKK 487
            ++ 
Sbjct: 387 EIQS 390


>gi|213582472|ref|ZP_03364298.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 238

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 66/222 (29%), Gaps = 4/222 (1%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             ++   +        G +E+   +E         N I     +  G  Y     +    
Sbjct: 9   FEKIVVKLSTRPDKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYD 68

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESST 369
                 +    V              V     + VP       +G     + + + E + 
Sbjct: 69  CLDRAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAG 127

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  
Sbjct: 128 FFPTWLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRV 186

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           P  ++ G  E   G + ++        S ++ +     +  +
Sbjct: 187 PYMLVCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 228


>gi|325969359|ref|YP_004245551.1| prolyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323708562|gb|ADY02049.1| prolyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 510

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/254 (10%), Positives = 71/254 (27%), Gaps = 24/254 (9%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +++     +         +       I + +      + R +               V 
Sbjct: 187 FKEAHTAHADREDAERQVREAVEIYKKIFDYLGIPYLINQRPEWDKFAGAVYTMAFDTVM 246

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                  +         F  V    +Y      +   +  + G S  +   ++A+   + 
Sbjct: 247 PDGKTMQIGTVHYLGTNFSKVF-DVKYLTPNGDWDYVHTTSYGISERVIAAMIAMHGDDK 305

Query: 368 STNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                  + P+ +  +       +   L + +   + L   GIR ++   + +  G +  
Sbjct: 306 GLVLPPNVAPIQVIIIPIMYKGTEEIILRETRSIQEELSNVGIRVKIDDRTDRTPGWKYN 365

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           Y +    PL I  G  +     + +                   R   + +   P   +V
Sbjct: 366 YWEMLGVPLRIEIGPKDIENRQVVL------------------ARRDTLEKYVAPRDGIV 407

Query: 483 STVKKILQENKEEI 496
            TV+++L    + +
Sbjct: 408 DTVRELLNTINDNL 421



 Score = 39.8 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 4/78 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        ++IR  +   +R +++  G   +  P+    + L K           V
Sbjct: 61  PVKGAYVWRPYGMKIRRLVETYVRFLHDETGHQEVLFPVFIPYEFLAKESEHIRGFESEV 120

Query: 71  FSLQDDDG---QWISLRY 85
           F      G   + + LR 
Sbjct: 121 F-WVSKGGANEERLVLRP 137


>gi|315924324|ref|ZP_07920547.1| threonine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622395|gb|EFV02353.1| threonine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 644

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 61/226 (26%), Gaps = 3/226 (1%)

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
           +  +E +DI   F  I   +   EL       +     +++     + +    Y      
Sbjct: 394 DEINEILDIADLFYGIFGLEYRPELSTRPADFMGDIALWDKAEAALKEILDKRYGEGGYD 453

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
           ++             + +  L         +            Y       K   +    
Sbjct: 454 VNEGDGAFYGPKIDIMMKDALDRTWQMGTIQVDFQLPRNFDLTYMDKDGELKVPVMIHRV 513

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
               + R I  L    +       + PV +  +          Q     LR   IR E+ 
Sbjct: 514 IYGSLERFIGLLIESTAGKFPFW-LSPVQVGIVPVREFHNEYAQSIADQLRDHRIRVEVD 572

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
                  G ++    +   P  +I G  E+    + ++ +  G +L
Sbjct: 573 -DRDAQMGGKISKFRKELLPYILIVGDKEKEANAVSVR-IRDGVQL 616



 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++ N +L+  R+ +E  G+  I +P +   + L +     D     +F +
Sbjct: 260 GMPYWLPKGWKLFNTLLEFWRDEHEKRGYQEISSPQI-NYNKLWRQSGHWDHYKDNMFVI 318

Query: 74  QDDDGQWISLRYDLTA 89
              + +   ++     
Sbjct: 319 PVSENEIYGVKPMNCP 334


>gi|315057961|gb|ADT72290.1| Prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 568

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 34  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 88

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 89  FGKELLRFKDRKENEFVLGP 108



 Score = 37.1 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 73/271 (26%), Gaps = 31/271 (11%)

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-VKGTIAGEKGFNELVVISELVRKSG 283
           +    +    E+  ++  F+     K +    +  ++       G NE       +    
Sbjct: 318 ELVDASEEELEKAGLVAGFIGFVGLKDIDFYIDFELENEKQMIMGANEKDYHLIGIDVVN 377

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
            N +R K    ++   E        A L      E       G           +     
Sbjct: 378 LNKDRFK---DLIEVKEGDCCVKCGAKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGK 434

Query: 344 QNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMY 396
                 G        ++A+             N       + I   +  D  +L      
Sbjct: 435 SQPFYMGCYGIGVSRLLAVATEASHDEKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKL 494

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + L   G+   +   + + FG ++   +    P A++ G G   +  +++       + 
Sbjct: 495 YEDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVVGKG-LEKNEIEL------IQR 546

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKK 487
              IK              I   EL+  +KK
Sbjct: 547 EGLIKEL------------IKTDELMEILKK 565


>gi|312214020|emb|CBX94022.1| similar to prolyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 561

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 40/114 (35%), Gaps = 14/114 (12%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
            +      SK +     L   G+R E       + G +    + +  PL I  G  +  +
Sbjct: 354 AEDKEALYSKVKNIADDLHEVGVRVETDYREGYSPGWKFNDWELKGIPLRIEFGPKDAEK 413

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           G++                +     +   A+ T  +  + + + K+L++ + ++
Sbjct: 414 GVVT--------------TSRRDIDDKDAARGTTSVDNIKTEIPKLLEQIQSDM 453


>gi|291617247|ref|YP_003519989.1| ThrS [Pantoea ananatis LMG 20103]
 gi|291152277|gb|ADD76861.1| ThrS [Pantoea ananatis LMG 20103]
          Length = 642

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     L +E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQLRTEVNSCIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E    +  N N I+       G  Y     +       
Sbjct: 416 ILVKLSTRPEKRIGSDETWDRAEEDLAAALNENNIEFEYQPGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     +  P       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P+    M+         +  T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 SWLAPMQAVVMNITDGQAEYVETLTRKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++       +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSMDVDVFVEKLQQEI 632



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 55/198 (27%), Gaps = 13/198 (6%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRF 125
              +F+    + +   ++        +   +   +    P R    G   RNE  G    
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH- 371

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                     +     T D        D L             + +    + IL K+   
Sbjct: 372 --------GLMRVRGFTQDDAHIFCTEDQLRTEVNSCIRMVYDMYSTFGFEKILVKLSTR 423

Query: 186 GDDKLNERLIVLRAIDKL 203
            + ++       RA + L
Sbjct: 424 PEKRIGSDETWDRAEEDL 441


>gi|255534998|ref|YP_003095369.1| threonyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255341194|gb|ACU07307.1| Threonyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 639

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/457 (8%), Positives = 112/457 (24%), Gaps = 80/457 (17%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R ++ + +    +  G++ +                            
Sbjct: 260 GLPLWLPKGAALRKKLENFLSEAQKKAGYEFV---------------------------- 291

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
                        +T         +         +        +         +  +  +
Sbjct: 292 -------------MTP--------HIGAKELYVTSGHWDKYGADSFQPIKTPNEGEEFML 330

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +         ++       L     +    +    +   L G+    G   DD     
Sbjct: 331 KPMNCPHHCEIYKVGQWSYKDLPKRFAEFGTVYRYEQS-GELHGLTRVRGFTQDDAHLFC 389

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                  D+L       + L L   ++    DF    +L   +      ++  D      
Sbjct: 390 TP-----DQLLTEFENVIDLTLYVFKSLGFEDFVTQISLRDPENKE--KYIGSD------ 436

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF 313
           E ++  +  I        L  + E    +             +             I   
Sbjct: 437 ENWKKAENAIIQAAAKKGLKTVVEYGEAAF-----YGPKLDFMVKDALGRSWQLGTIQVD 491

Query: 314 PVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK 373
             + E+      GS            + +   +    F      + + L++         
Sbjct: 492 YNLPERFDLWYIGSDN---------EKHRPVMIHRAPFGSMERFIAILLENTAGDFPLWL 542

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
                 I  +          +  +++L    I   +    ++  G +++ A+ +  P  +
Sbjct: 543 APDQFTILPIS--EKYADYAKKVSELLENHDI-CGLIDDRNEKTGRKIRDAEIKKLPFML 599

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           + G  E   G + ++   +G   +  +++  ++ + +
Sbjct: 600 VVGETEELNGTVSVRRRGEGDLGTMSVEDFIAYFKEQ 636


>gi|169836559|ref|ZP_02869747.1| prolyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 289

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYAD 425
               +I      +I     D   ++  +   + L+   I   +   + +  F    K AD
Sbjct: 185 IWPKSIAPYIADVIIANVKDETQVNVAERIYEALKNENIDVVLDDRNERAGFK--FKDAD 242

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKG 453
               PL I+ G G  + G++++KD A G
Sbjct: 243 LIGFPLKIVAGKG-AANGIVEVKDRATG 269


>gi|254477067|ref|ZP_05090453.1| threonyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031310|gb|EEB72145.1| threonyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 648

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 77/268 (28%), Gaps = 25/268 (9%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F     +TSE    +     +  +   H     +        G +E     E   
Sbjct: 392 DDGHIFCAEDQITSETAKFIAFLSKVYADLGFHNWTIKLSTRPEKRIGSDETWDHMEQAL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                +           G  Y     +   +AI         Q                 
Sbjct: 452 GEACKAAGYDFEILEGEGAFYGPKLEFTLTDAIGRNWQCGTLQVDANLPERLEATFIGQD 511

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            ++ +   +           + + ++              V++ ++  ++D         
Sbjct: 512 GAKHRPVMLHRACLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSEAD--DYVLEVV 569

Query: 398 QMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           + L+ AG+RAE  + + K        + G           P+ +  G  E     + ++ 
Sbjct: 570 EQLKAAGVRAEADMRNEKINYKVREHSVGK---------VPVILAVGAREVEERTVSVRR 620

Query: 450 LAKGKELSREIKNNESWREARVAQITIP 477
           L  G++ + ++++ E+  +    + T P
Sbjct: 621 L--GEKQT-KVESLETVTKTLATEATPP 645



 Score = 36.7 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 19/172 (11%), Positives = 46/172 (26%), Gaps = 7/172 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G         RI  ++ D +R + +  G+  + TP +       K     D+ 
Sbjct: 260 MQEEAP-GQVFWHPNGWRIYTQLQDYMRRMQDRDGYVEVNTPQVVDRKLWEKS-GHWDKY 317

Query: 67  NKGVFSLQDDDGQ-----WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            + +F ++ D+         +L+        +   +   +                 +  
Sbjct: 318 QENMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCARYEPS 377

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                                A+ ++    A  +  +     D        K
Sbjct: 378 GALHGIMRVRGFTQDDGHIFCAEDQITSETAKFIAFLSKVYADLGFHNWTIK 429


>gi|168485970|ref|ZP_02710478.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570860|gb|EDT91388.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 617

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   + TP L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLTPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|153952152|ref|YP_001398429.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166980114|sp|A7H4J9|SYP_CAMJD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152939598|gb|ABS44339.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 569

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 35  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 89

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 90  FGKELLRFKDRKENEFVLGP 109



 Score = 36.7 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 47/137 (34%), Gaps = 11/137 (8%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLS 391
            +   S+         G S  ++  I A    +    N      VL   +    D  +L 
Sbjct: 431 DENGKSQPFYMGCYGIGVSRLLAVAIEASHDEKGCIWNKTLAPFVLEIIVSNIKDEKTLE 490

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ----- 446
                 + L   G+   +   + + FG ++   +    P A++ G G      ++     
Sbjct: 491 FANKLYEDLTELGLEVLLDDRNER-FGVKMNDFELMGFPYALVIGKG-LENNEIEFIQRE 548

Query: 447 --IKDLAKGKELSREIK 461
             +K+L K  EL+  +K
Sbjct: 549 GLVKELIKTDELTEILK 565


>gi|91087799|ref|XP_967345.1| PREDICTED: similar to RH56418p [Tribolium castaneum]
          Length = 707

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 41/146 (28%), Gaps = 21/146 (14%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                      + +  +S              ++  +    D     Q   + L  AG  
Sbjct: 575 HRAILGSVERMIAILTESCGGKWPFWISPRQAMVIPVGPTYD--EYAQDVKKKLYEAGFM 632

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE+   +      +++ A        ++ G  ERS   + ++                  
Sbjct: 633 AEVDTDAGDTMNKKIRNAQLAQFNFILVVGEKERSSQTVNVR------------------ 674

Query: 467 REARVAQITIPISELVSTVKKILQEN 492
               +    I +  L+   K +LQEN
Sbjct: 675 TRDNIVHGEISVEGLIEKFK-VLQEN 699



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N +++ I+  Y   GF  + +P + ++  L +           +FS  D +
Sbjct: 331 FQPRGAHIYNTLINFIKKEYRKRGFQEVISPNI-FNAKLWQVSGHWAHYADNMFSF-DVE 388

Query: 78  GQWISLRYDLTAP 90
               +L+      
Sbjct: 389 KDKFALKPMNCPG 401


>gi|293611014|ref|ZP_06693313.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826666|gb|EFF85032.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 571

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 44/160 (27%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G         R+  ++   +R      G   +  P+ + + SL +     ++ 
Sbjct: 31  MIRKLASGLYTWLPMGTRVLKKVDAIVREEMNRSGAMEVFMPVTQPA-SLWEESGRYEQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D       L     ++   +AR   +++  +          +R     R   
Sbjct: 90  GPELLRFKDRHTNPFVLGPTHEEVITDMARNELKSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F             S +     M    +     +G
Sbjct: 150 MRSREFIMKDAYSFHATQESLQETYDVMYDTYSRIFTRLG 189


>gi|168998640|ref|YP_001687908.1| hypothetical protein pK2044_00390 [Klebsiella pneumoniae
           NTUH-K2044]
          Length = 333

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M          +   + LR  G+R E  L  ++  G +++       P  +
Sbjct: 229 WLSPVQAVVMTITDKQHRYAEQVLKALRRKGLRCETDL-RNEKIGYKIREQTLARIPFLL 287

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           I G  E +   + ++D   GK
Sbjct: 288 IIGDAEENAARVTVRD-RTGK 307


>gi|167752344|ref|ZP_02424471.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216]
 gi|167660585|gb|EDS04715.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216]
          Length = 651

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 36/111 (32%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   +    F      + V L+                +  +          +  +
Sbjct: 508 DKMHRPIMIHRAPFGSMERFVAVLLEHTGGKFPLWLSPDQ--VVVLPISEKFNDYAEKVS 565

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             L    IR+++    ++  G +++  + +  P  +I G  E + G++ ++
Sbjct: 566 AYLNKYDIRSQVD-DRNEKIGRKIRDNELKRIPYLLIVGEKEEAEGLVSVR 615



 Score = 44.8 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   +R+R+   +R + + YG+  + TP +   +      
Sbjct: 261 GLPLWLPKGAALRDRLEQFLRGVQKEYGYQQVITPHIGNKELYVTSG 307


>gi|145506787|ref|XP_001439354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406538|emb|CAK71957.1| unnamed protein product [Paramecium tetraurelia]
          Length = 640

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/411 (11%), Positives = 114/411 (27%), Gaps = 44/411 (10%)

Query: 83  LRYDLTAP-----LARYVAENFDTIVFPCRTYRIG-PVFRNEKHGPGRFRQFIQCDVDNV 136
           LR + TA       AR + +N   + F      +G       + G  R R+F   +++  
Sbjct: 205 LRPE-TAQGMFLNFARLLEQNGGRVPFGAAQIGLGFRNEIAPRGGLLRCREFQMAEIEYF 263

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
               E +  +      +    +  ++       +    +   +++  ++ +        +
Sbjct: 264 VDPTEKSTFKKFNKYINLEIPLLSRQLQAEAKQHQPFKMGDAVKEGIINNETLAY---FI 320

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA---------------NLTSEQIDIMV 241
            R    L + G+  V +   + + D    ++                   L       + 
Sbjct: 321 CRTYLYLVEIGINPVNIRFRQHQADEMAHYSSDCWDAEIEMSSGWVECVGLADRSAYDLN 380

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           +  +   +K        V       +   +   I + ++K G    +   +       E 
Sbjct: 381 AHSAATGQKLQAARKFKVPQPRQVLQVILDKQKIGKELKKDGMALIKYVEALPDDEKQEL 440

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                      F +  +                  +    +         + GI R++ A
Sbjct: 441 SDYFQNHEDKVFNIDGKDLTLNRQLVKFEQKT---MNVMEEKFIPHVIEPAFGIGRILQA 497

Query: 362 LKSLESSTNNIKEMGP-----------VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           +     +  +  +                I ++    +     Q  T  L+  GI  +  
Sbjct: 498 IIEHSFNQRDDPQKTFFKFSPRVAPVKCSILSVVQSEEFDVVIQELTSSLKKLGISCKTD 557

Query: 411 LGSSKNFGNQLKYA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
             +    G   KYA  D    P AI       +   + ++++   K++   
Sbjct: 558 -NAGVALGK--KYARTDEIGIPFAITVDKETLAAQSVTLREIETTKQVRVP 605


>gi|222529399|ref|YP_002573281.1| glycyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456246|gb|ACM60508.1| glycyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 434

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 31/106 (29%), Gaps = 3/106 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +         +  +    + + K +     L     +  +    S + G + +  D 
Sbjct: 329 LHLHPAISPVKAAVFPLMKKEELVKKAREIYNEL---KYKWIVQYDESGSIGKRYRRQDE 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P  I           + I+D    +++   IK    + E R+ 
Sbjct: 386 IGTPFGITVDYQTLEDETVTIRDRDTMEQIRVHIKEIIPYLEERIE 431


>gi|163851744|ref|YP_001639787.1| threonyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163663349|gb|ABY30716.1| threonyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 675

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 83/272 (30%), Gaps = 10/272 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNELVVIS 276
           D++  F     L +E + I    LS   +    ++   +          +  ++    + 
Sbjct: 387 DDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILVKLSTRPEKRVGSDALWDHAEAVM 446

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
             V       +  +I + +  G   + G  +E +L   +  + Q            R+D 
Sbjct: 447 TQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRDAIGRDWQCGTTQVDFNLPERFDA 506

Query: 337 LVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                  Q  P           + R    L    +    +  + PV +      SD+   
Sbjct: 507 SYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGHFPLW-LAPVQVVVATITSDADPY 565

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   ++L  AG+R E  L  ++    +++       P+ +  G  E     + ++ +  
Sbjct: 566 AREVVRVLERAGLRVEADL-RNEKINYKVREHSLAKVPVLLALGRREAEERTVSVRRMGS 624

Query: 453 GKELSREIKNNESWREARVAQITIPISELVST 484
            K  +  +    +             ++  + 
Sbjct: 625 QKTTTMALDAALAAFIEEATSPDRRRADAAAE 656


>gi|218562195|ref|YP_002343974.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|81858473|sp|Q9PHX1|SYP_CAMJE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112359901|emb|CAL34689.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 569

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 35  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 89

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 90  FGKELLRFKDRKENEFVLGP 109



 Score = 37.5 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 48/156 (30%), Gaps = 22/156 (14%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLS 391
            +   S+         G S  ++  I A    +    N      VL   +    D  +L 
Sbjct: 431 DENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCIWNKTLAPFVLEIIVSNLKDEKALE 490

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 + L   G+   +   + + FG ++   +    P A++ G G      +++    
Sbjct: 491 FANKLYRDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVIGKG-LENNEIEL---- 544

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
                          +   + +  I   EL+  +KK
Sbjct: 545 --------------IQREGLVKELIKTDELMEILKK 566


>gi|86149024|ref|ZP_01067256.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840382|gb|EAQ57639.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 569

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 35  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 89

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 90  FGKELLRFKDRKENEFVLGP 109



 Score = 37.5 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 48/156 (30%), Gaps = 22/156 (14%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLS 391
            +   S+         G S  ++  I A    +    N      VL   +    D  +L 
Sbjct: 431 DENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCIWNKTLAPFVLEIIVSNLKDEKALE 490

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 + L   G+   +   + + FG ++   +    P A++ G G      +++    
Sbjct: 491 FANKLYRDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVIGKG-LENNEIEL---- 544

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
                          +   + +  I   EL+  +KK
Sbjct: 545 --------------IQREGLVKELIKTDELMEILKK 566


>gi|308173620|ref|YP_003920325.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606484|emb|CBI42855.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328553448|gb|AEB23940.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328911761|gb|AEB63357.1| prolyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 564

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 4/101 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+   I   +R   E      +  P L+ +++  +           +  
Sbjct: 37  SGVYSYMPLAYRVIQNIQKIVREEMEKINAVEMLMPALQQAETWQES-GRWYTYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR 110
           L+D  G+  +L     ++   L R   +++  +       +
Sbjct: 96  LKDRHGREFALGATHEEVITSLVRDEVKSYKRLPLTLYQIQ 136



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/109 (9%), Positives = 35/109 (32%), Gaps = 3/109 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          + I  ++  +++  +  +      +  G    ++   ++  G + 
Sbjct: 458 DEKGLIWPKSVAPYDLHILALNMKNEAQKELAEKLYGKFQAEGYEV-LYDDRAERAGVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             +D    P+ I  G      G++++K    G+     +     + + +
Sbjct: 517 ADSDLIGLPIRITVGKR-ADEGIVEVKIRKTGESAEVSVDELSEFIKTK 564


>gi|317180044|dbj|BAJ57830.1| prolyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 577

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 88/295 (29%), Gaps = 14/295 (4%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +++    L          L+ VK L        N+ +  + +    +   ++  F+    
Sbjct: 286 IHKDKETLACFFVRGDDNLEEVKALNALNIIGANALELREASQKDLDNAGLIAGFIGPYG 345

Query: 249 EK---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            K   S     E +K       G NE    +  V   G+ +        +          
Sbjct: 346 LKKHVSYIIFDEDLKEGDCLIVGANEKDFHAVGVDLKGFENLVYADIVQVKESDHCPNCQ 405

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +    K     +      +     + +   +   G  I  SRL+ A+   
Sbjct: 406 GALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGI--SRLLSAILEQ 463

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +        T N      V++ +   D           + LR  G+ A +    ++ FG 
Sbjct: 464 KSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDAR-FGA 522

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
           +++  +     LA+I G         + IK     K+  ++ +  E   E   ++
Sbjct: 523 KMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKILEMLESE 577



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|307747462|gb|ADN90732.1| Prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315931738|gb|EFV10693.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 568

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 34  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 88

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 89  FGKELLRFKDRKENEFVLGP 108



 Score = 37.1 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 75/283 (26%), Gaps = 31/283 (10%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-VKGTIAGEKGFNE 271
             +      ++ +    +    E+  ++  F+     K +    +  ++       G NE
Sbjct: 306 QEIKAQNACSALELVDASEEELEKAGLVAGFIGFVGLKDIDFYIDFELENEKQMIMGANE 365

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
                  +     N +R K    ++   E        A L      E       G     
Sbjct: 366 KDYHLIGIDVVNLNKDRFK---DLIEVKEGDCCAKCGAKLKQSKGIEVGHIFKLGQKYSK 422

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMD- 384
                 +           G        ++A+             N       + I   + 
Sbjct: 423 AMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHDEKGCIWNKTLAPFVLEIIVSNL 482

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D  +L       + L   G+   +   + + FG ++   +    P A++ G G      
Sbjct: 483 KDEKALEFANKLYEDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVIGKG-LENNE 540

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           +++                   +   + +  I   EL+  +KK
Sbjct: 541 IEL------------------IQREGLVKELIKTDELMEILKK 565


>gi|283955965|ref|ZP_06373455.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792625|gb|EFC31404.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 568

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 34  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 88

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 89  FGKELLRFKDRKENEFVLGP 108


>gi|261880448|ref|ZP_06006875.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270332871|gb|EFA43657.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 521

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 13/142 (9%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +              +      +R
Sbjct: 391 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKFNDYALEVKKHFDANDVR 448

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A +    ++  G +++  + +  P  +I G  E + G++ ++    G++ S +I +    
Sbjct: 449 AYID-DRNEKIGRKIRDNELKRVPYMVIVGEKEANEGLVSMRKQGGGEQASMKITDFIQR 507

Query: 467 REARVAQITIPISELVSTVKKI 488
                        E+   +K+I
Sbjct: 508 I----------KDEVADQLKEI 519


>gi|205355399|ref|ZP_03222170.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346633|gb|EDZ33265.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 569

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 35  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 89

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 90  FGKELLRFKDRKENEFVLGP 109



 Score = 37.1 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 22/156 (14%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLS 391
            +   S+         G S  ++  I A    +    N      VL   +    D  +L 
Sbjct: 431 DENGKSQPFYMGCYGIGVSRLLAVAIEASHDEKGCIWNKTLAPFVLEIIVSNLKDEKALE 490

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 + L   G+   +   + + FG ++   +    P A++ G G   +  +++    
Sbjct: 491 FANKLYEDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVVGKG-LEKNEIEL---- 544

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
              +    IK              I   EL+  +KK
Sbjct: 545 --IQREGLIKEL------------IKTDELMEILKK 566


>gi|38537103|gb|AAR23527.1| threonyl-tRNA synthetase [Homo sapiens]
          Length = 443

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 38/106 (35%), Gaps = 8/106 (7%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P  +  +   S+     +   Q LR AG+ +++   S      +++ A   +  
Sbjct: 332 WPLWLSPFQVVVIPVGSEQEEYAKEARQSLRAAGLVSDLDADSGLTLSRRIRRAQLAHYN 391

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 392 FQFVVGQKEQSKRTVNIR--------TRDNRRLGEWDLPEAVQRLV 429


>gi|57238257|ref|YP_178662.1| prolyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81819550|sp|Q5HVM3|SYP_CAMJR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|57167061|gb|AAW35840.1| prolyl-tRNA synthetase [Campylobacter jejuni RM1221]
          Length = 569

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 35  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 89

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 90  FGKELLRFKDRKENEFVLGP 109



 Score = 37.1 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 73/271 (26%), Gaps = 31/271 (11%)

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-VKGTIAGEKGFNELVVISELVRKSG 283
           +    +    E+  ++  F+     K +    +  ++       G NE       +    
Sbjct: 319 ELVDASEEELEKAGLVAGFIGFVGLKDIDFYIDFELENEKQMIMGANEKDYHLIGIDVVN 378

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
            N +R K    ++   E        A L      E       G           +     
Sbjct: 379 LNKDRFK---DLIEVKEGDCCVKCGAKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGK 435

Query: 344 QNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMY 396
                 G        ++A+             N       + I   +  D  +L      
Sbjct: 436 SQPFYMGCYGIGVSRLLAVATEASHDEKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKL 495

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + L   G+   +   + + FG ++   +    P A++ G G   +  +++       + 
Sbjct: 496 YEDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVVGKG-LEKNEIEL------IQR 547

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKK 487
              IK              I   EL+  +KK
Sbjct: 548 EGLIKEL------------IKTDELMEILKK 566


>gi|284925806|gb|ADC28158.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 569

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 35  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 89

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 90  FGKELLRFKDRKENEFVLGP 109



 Score = 37.1 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 73/271 (26%), Gaps = 31/271 (11%)

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-VKGTIAGEKGFNELVVISELVRKSG 283
           +    +    E+  ++  F+     K +    +  ++       G NE       +    
Sbjct: 319 ELVDASEEELEKAGLVAGFIGFVGLKDIDFYIDFELENEKQMIMGANEKDYHLIGIDVVN 378

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
            N +R K    ++   E        A L      E       G           +     
Sbjct: 379 LNKDRFK---DLIEVKEGDCCVKCGAKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGK 435

Query: 344 QNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMY 396
                 G        ++A+             N       + I   +  D  +L      
Sbjct: 436 SQPFYMGCYGIGVSRLLAVATEASHDEKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKL 495

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + L   G+   +   + + FG ++   +    P A++ G G   +  +++       + 
Sbjct: 496 YEDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVVGKG-LEKNEIEL------IQR 547

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKK 487
              IK              I   EL+  +KK
Sbjct: 548 EGLIKEL------------IKTDELMEILKK 566


>gi|268608254|ref|ZP_06141981.1| glycyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 468

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 37/111 (33%), Gaps = 4/111 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           K + +  +    + P     +        K +   +ML     +  +    +   G + +
Sbjct: 360 KEIRTVMHFHPALAPFKCAVLPLVKKLTPKAEEVYEMLSK---KFMVDFDEAGTIGKRYR 416

Query: 423 YADRRNCPLAIIQGTGERSR-GMLQIKDLAKGKELSREIKNNESWREARVA 472
             D    P  I        +   + ++D    +++   +   E + EA++A
Sbjct: 417 RQDEIGTPFCITVDFDTIEKDNCVTVRDRDTMEQVRVSLDELEEFIEAKIA 467


>gi|206603264|gb|EDZ39744.1| Threonyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 617

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +IR  + +  + +++ +G+  + TP +   D   +     D     +F  
Sbjct: 234 GLVLWLPKGSQIRRTLEELWKILHDRHGYRYVYTPHIARLDLWMQS-GHWDYYQDSMFRP 292

Query: 74  QDDDGQWISLRYDLTA 89
            + +G    L+     
Sbjct: 293 METEGTAYELKPMNCP 308



 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 43/148 (29%), Gaps = 6/148 (4%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +      +   +    F        + ++    +         V I T+      +   Q
Sbjct: 472 NDSGEPCRPIMIHRALFGSIERFFGILIEHYAGAFPLWLAPEQVRIMTIA--DRHIPYAQ 529

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                L+  G+RAE     ++  G +++ A     P   + G  E     + ++   +G+
Sbjct: 530 TVLSRLKDRGVRAEGDF-RNEKIGFKVREAQMEKIPEMWVVGDREVEETRVSVRS-REGE 587

Query: 455 ELSR--EIKNNESWREARVAQITIPISE 480
           +          E           +P S 
Sbjct: 588 KKDLCPLESELEDLFRRSFPPEMLPRSN 615


>gi|157414824|ref|YP_001482080.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047085|sp|A8FKW6|SYP_CAMJ8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157385788|gb|ABV52103.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
          Length = 568

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 34  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 88

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 89  FGKELLRFKDRKENEFVLGP 108



 Score = 37.5 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 75/283 (26%), Gaps = 31/283 (10%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-VKGTIAGEKGFNE 271
             +      ++ +    +    E+  ++  F+     K +    +  ++       G NE
Sbjct: 306 QEIKAQNACSALELVDASEEELEKAGLVAGFIGFVGLKDIDFYIDFELENEKQMIMGANE 365

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
                  +     N +R K    ++   E        A L      E       G     
Sbjct: 366 KDYHLIGIDVVNLNKDRFK---DLIEVKEGDCCAKCGAKLKQSKGIEVGHIFKLGQKYSK 422

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMD- 384
                 +           G        ++A+             N       + I   + 
Sbjct: 423 AMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEASHDEKGCIWNKTLAPFVLEIIVSNL 482

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D  +L       + L   G+   +   + + FG ++   +    P A++ G G      
Sbjct: 483 KDEKALEFANKLYEDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVIGKG-LENNE 540

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           +++                   +   + +  I   EL+  +KK
Sbjct: 541 IEL------------------IQREGLVKELIKTDELMEILKK 565


>gi|149374489|ref|ZP_01892263.1| threonyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149361192|gb|EDM49642.1| threonyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 641

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 58/209 (27%), Gaps = 10/209 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   I   +R     +G+  I+TP +  S +L +     D+ 
Sbjct: 255 MQEEAP-GMVFWHPDGWSLYQEIEQYMRGKQHKHGYQEIKTPQV-VSRALWEKSGHWDKF 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+  + +    +++             +        ++Y+  P+   E     R  
Sbjct: 313 KDDMFT-TESEKHDYAIKPMNCP-------CHVQVFNQGLKSYKDLPLRLAEFGSCHRNE 364

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                            DA +        + V       H    +    + + +      
Sbjct: 365 ASGALHGLMRVRGFTQDDAHIFCEEDAIQQEVSDFIGMLHEIYADFGFTEILYKLSTRPE 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
               ++ +         +    +GV   L
Sbjct: 425 KRVGSDEVWDKSEAALEEALNREGVDWEL 453



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 41/372 (11%), Positives = 95/372 (25%), Gaps = 7/372 (1%)

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
                   G      + +     V S A    +       D +     +++DY I   N 
Sbjct: 274 QEIEQYMRGKQHKHGYQEIKTPQVVSRALWEKSGHWDKFKDDMFTTESEKHDYAIKPMNC 333

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
                +  +      D                   L G+ + +     D++  F +   +
Sbjct: 334 PCHVQVFNQGLKSYKDLPLRLAEFGSCHRNEASGALHGL-MRVRGFTQDDAHIFCEEDAI 392

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             E  D +     I  +    E+   +        G +E+   SE   +   N   +   
Sbjct: 393 QQEVSDFIGMLHEIYADFGFTEILYKLSTRPEKRVGSDEVWDKSEAALEEALNREGVDWE 452

Query: 293 STIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                G  Y     +   + I         Q         G         R     +   
Sbjct: 453 LLPGEGAFYGPKIEFSLKDCIGRVWQCGTIQVDFSMPGRLGAQYVADNSERKTPVMLHRA 512

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                   + + ++  E +           I  ++   +     Q   +   + G R   
Sbjct: 513 VLGSFERFIGILIEEYEGAFPTWLAPTQ--IAVLNITDNQRDYCQNLAKKWDSLGYRVNA 570

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            L  ++  G +++       P  ++ G  E     + ++        +  ++  E     
Sbjct: 571 DL-RNEKIGFKIREHTINKVPFLVVIGDKEVENNAVAVRTRKGEDLGTLSLEAFEQLMAD 629

Query: 470 RVAQITIPISEL 481
            + +     +E+
Sbjct: 630 EINRKGRTKTEI 641


>gi|21674311|ref|NP_662376.1| prolyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|81860050|sp|Q8KCD1|SYP_CHLTE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21647484|gb|AAM72718.1| prolyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 481

 Score = 49.1 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/246 (10%), Positives = 70/246 (28%), Gaps = 21/246 (8%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    + +      +       +   S   +          EA+
Sbjct: 156 WQEGHTAHATPEEAQEEVIRMINIYRTFAEEYMAMPVIVGKKSESEKFAGADATYCIEAM 215

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-------K 363
           +      +       G            ++    +          +RLI AL       K
Sbjct: 216 MQDGKALQAGTSHNLGQNFAKAFDCQFQTKDGVLDYVWATSWGVSTRLIGALIMAHSDDK 275

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
            L            ++     +  +  ++ +   + L   GI   +    + + G +   
Sbjct: 276 GLVLPPKLASRQVVIIPILKGNKDEVRARARFIAKTLNRHGIPTFVDDSENNSPGWKFAE 335

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  P+ I  G  +  +G   +      ++    + +          ++TI I E+++
Sbjct: 336 YELQGIPVRIELGPRDLEQGKCIVARRDTFEKTELLLDD----------ELTINIEEILN 385

Query: 484 TVKKIL 489
            +++ L
Sbjct: 386 NIQQNL 391


>gi|329767542|ref|ZP_08259065.1| prolyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328835876|gb|EGF85598.1| prolyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 566

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 38/103 (36%), Gaps = 2/103 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +      L+       + +   +     L  AG    ++   ++  G +   AD 
Sbjct: 463 IWPKEVAPYQVHLVCVDVKKEEQVKLSEELYAQLTAAGYEV-LYDDRAERAGVKFNDADL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              PL ++ G      G++++K+    +++  E+ +  +  EA
Sbjct: 522 IGIPLQVVVGKK-AGEGIVEVKERKTLEKVDTEVADVLAKVEA 563



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 1/82 (1%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K  +  ++  G         R+  +I   IR  +E  G   +  P+L+ SD   K     
Sbjct: 28  KAGMVKQVSAGVYTHLPLATRVIQKIEKVIREEHEKIGAVELLMPILQ-SDEYWKKSGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           ++    +  + D      +L  
Sbjct: 87  NKMGDELIRVTDRKNAGYALSP 108


>gi|296271847|ref|YP_003654478.1| threonyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096022|gb|ADG91972.1| threonyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 602

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/79 (10%), Positives = 32/79 (40%), Gaps = 1/79 (1%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P  +  +          +     L    + +++    +++   +++ A+++  P+ ++ G
Sbjct: 504 PTQVIFVPIADTHNEYAKELQNELLQNSMDSKI-FNMNESLNKRIRMAEKQRVPMIVVIG 562

Query: 437 TGERSRGMLQIKDLAKGKE 455
             E     + ++D  K ++
Sbjct: 563 DEEVENKTVALRDRRKREQ 581


>gi|71899288|ref|ZP_00681449.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|71730914|gb|EAO32984.1| Proline--tRNA ligase [Xylella fastidiosa Ann-1]
          Length = 303

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++   +R+     G   +  P ++  + L +     ++ 
Sbjct: 31  MIRKLASGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPTIQPRE-LWEESERWEKF 89

Query: 67  NKGVFSLQDDDGQWIS 82
              +  ++D       
Sbjct: 90  GSQLLKIKDRKQAEYC 105


>gi|300934571|ref|ZP_07149827.1| threonyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 706

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 11/121 (9%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +     V I   D  ++ L         LR  GIRAE+     +    +++   
Sbjct: 587 GAFPAWLAPHQVVGIPVADEFNEYLD---SVASDLRKRGIRAEVDTSDDR-MQKKIRTHT 642

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKEL-----SREIKNNESWR-EARVAQITIPIS 479
               P  ++ G  +     +  + L  G ++      R ++    W  E R  Q T    
Sbjct: 643 TGKVPFMLLVGGRDVEADAVSFRFL-DGSQVNGVPRDRAVELIAQWIGERRNTQPTKAEV 701

Query: 480 E 480
           E
Sbjct: 702 E 702



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 1/59 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
            GF         +R  + +  R  +   G+  + TP +   D   K     D   +G+F
Sbjct: 303 SGFPVFHPNGGIVRLEMEEHSRRRHIESGYSFVNTPHITKGDLFQKS-GHLDFYAEGMF 360


>gi|70606652|ref|YP_255522.1| glycyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68567300|gb|AAY80229.1| glycyl-tRNA synthetase class II [Sulfolobus acidocaldarius DSM 639]
          Length = 574

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 37/111 (33%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               + I  +    + + K +     L+    R ++    S + G +    D    P +I
Sbjct: 464 SPYDIAIFPLLEKDELIKKAREIYDSLKE---RYDIIFDDSGSIGKRYARVDEIGVPYSI 520

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI-PISELVS 483
                  +   + I+D    +++   I +  +  +          + +LVS
Sbjct: 521 TVDPMTLTDNTVTIRDRDSWQQIRVNITDLMNVLDRLFKGEDFNKLGKLVS 571


>gi|329942565|ref|ZP_08291375.1| prolyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287196|ref|YP_004422097.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847792|emb|CBY16782.1| prolyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506498|gb|ADZ18136.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815475|gb|EGF85463.1| prolyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914444|gb|AEB55277.1| prolyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 577

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL-PDEDRP 66
             +  +G         R+  ++++ IR      G   +  P+L  ++   K    +  R 
Sbjct: 32  IFKTAKGIYTYTPLFWRVARKMMEIIREELNAIGGQELVLPILHPAELWQKTGRWEAFRS 91

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +++L+D + +   L  
Sbjct: 92  EGLLYTLKDREDKEFCLAP 110


>gi|254561516|ref|YP_003068611.1| threonine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254268794|emb|CAX24755.1| threonine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 675

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 83/272 (30%), Gaps = 10/272 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNELVVIS 276
           D++  F     L +E + I    LS   +    ++   +          +  ++    + 
Sbjct: 387 DDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILVKLSTRPEKRVGSDALWDHAEAVM 446

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
             V       +  +I + +  G   + G  +E +L   +  + Q            R+D 
Sbjct: 447 TQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRDAIGRDWQCGTTQVDFNLPERFDA 506

Query: 337 LVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                  Q  P           + R    L    +    +  + PV +      SD+   
Sbjct: 507 SYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGHFPLW-LAPVQVVVATITSDADPY 565

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   ++L  AG+R E  L  ++    +++       P+ +  G  E     + ++ +  
Sbjct: 566 AREVVRVLERAGLRVEADL-RNEKINYKVREHSLAKVPVLLALGRREAEERTVSVRRMGS 624

Query: 453 GKELSREIKNNESWREARVAQITIPISELVST 484
            K  +  +    +             ++  + 
Sbjct: 625 QKTTTMALDAALAAFIEEATSPDRRRADAAAE 656


>gi|148925913|ref|ZP_01809600.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145844899|gb|EDK22003.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 576

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 42  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 96

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 97  FGKELLRFKDRKENEFVLGP 116



 Score = 37.1 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 73/271 (26%), Gaps = 31/271 (11%)

Query: 225 DFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-VKGTIAGEKGFNELVVISELVRKSG 283
           +    +    E+  ++  F+     K +    +  ++       G NE       +    
Sbjct: 326 ELVDASEEELEKAGLVAGFIGFVGLKDIDFYIDFELENEKQMIMGANEKDYHLIGIDVVN 385

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
            N +R K    ++   E        A L      E       G           +     
Sbjct: 386 LNKDRFK---DLIEVKEGDCCVKCGAKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGK 442

Query: 344 QNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMY 396
                 G        ++A+             N       + I   +  D  +L      
Sbjct: 443 SQPFYMGCYGIGVSRLLAVATEASHDEKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKL 502

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
            + L   G+   +   + + FG ++   +    P A++ G G   +  +++       + 
Sbjct: 503 YEDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVVGKG-LEKNEIEL------IQR 554

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKK 487
              IK              I   EL+  +KK
Sbjct: 555 EGLIKEL------------IKTDELMEILKK 573


>gi|86151603|ref|ZP_01069817.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841232|gb|EAQ58480.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 569

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 35  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 89

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 90  FGKELLRFKDRKENEFVLGP 109



 Score = 37.9 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 48/156 (30%), Gaps = 22/156 (14%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLS 391
            +   S+         G S  ++  I A    +    N      VL   +    D  +L 
Sbjct: 431 DENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCIWNKTLAPFVLEIIVSNLKDEKALE 490

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
                 + L   G+   +   + + FG ++   +    P A++ G G      +++    
Sbjct: 491 FANKLYEDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVIGKG-LENNEIEL---- 544

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
                  + ++             I   EL+  +KK
Sbjct: 545 ------IQREDLVKEL--------IKTDELMEILKK 566


>gi|306821412|ref|ZP_07455017.1| proline--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550534|gb|EFM38520.1| proline--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 482

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 33/96 (34%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              I  +  V+I         L K       L+  GIR E+   S  + G +    + + 
Sbjct: 288 PPEIAPIQVVIIPIQQQKEGVLDKANEIYSSLKNLGIRVELDDDSKNSTGWKFNEYEMKG 347

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
            PL I  G  +    ++ I      ++    I + E
Sbjct: 348 VPLRIEIGPRDIQNNIVSISRRDTLEKDQISIDDIE 383


>gi|298245367|ref|ZP_06969173.1| prolyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297552848|gb|EFH86713.1| prolyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 578

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 5/81 (6%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G         R+  ++ + IR   E  G   +  P+L+  +               
Sbjct: 34  QLTSGVYSMLPLGERVMRKLTEIIRAEMERIGGQEVSMPVLQPREIWEARPQSGKASRAE 93

Query: 70  -----VFSLQDDDGQWISLRY 85
                +FSL D   + + L  
Sbjct: 94  GYGPVLFSLHDRRERELVLGP 114


>gi|296269165|ref|YP_003651797.1| glycyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296091952|gb|ADG87904.1| glycyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 461

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/188 (10%), Positives = 44/188 (23%), Gaps = 12/188 (6%)

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                            ++         +      F    G      ++    G +  A 
Sbjct: 276 FPGMEWGELEGIANRTDFDLSSHSKASGQD--LSYFDQETGQRYIPYVIEPAAGVDRTAL 333

Query: 350 GFSIGISRLIVALKSLESSTN-------NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
            F +    +  A  +                    V +  +  ++D   K +     LR 
Sbjct: 334 TFLLDAYTVDEAPNAKGEMEQRTVLRLDPRLAPVKVAVLPLSRNADLSPKARDLAAQLRR 393

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
                E     +   G + +  D    P A+           + +++     +    I  
Sbjct: 394 R-WNVEFD--DAGAIGRRYRRQDEIGTPYAVTIDFQTLEDNAVTVRERDSMAQERISIDQ 450

Query: 463 NESWREAR 470
            E++   R
Sbjct: 451 VEAYLRER 458


>gi|284929738|ref|YP_003422260.1| prolyl-tRNA synthetase, family II [cyanobacterium UCYN-A]
 gi|284810182|gb|ADB95879.1| prolyl-tRNA synthetase, family II [cyanobacterium UCYN-A]
          Length = 606

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 42/156 (26%), Gaps = 9/156 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         R+  +    IR    + G      P L+ SD   +    +        +
Sbjct: 37  SGIYSYLPLMWRVLRKTSQIIREEMNSIGGQECLLPQLQISDLWEESGRWKTYTEAEGIM 96

Query: 71  FSLQDDDGQWISLRY---DLTAPLAR-YVAENF---DTIVFPCRTYRIGPVFRNEKHGPG 123
           FSL D   + ++L     ++   + R  V         +      +R     R       
Sbjct: 97  FSLIDRQNRELALGPTHEEVVTSIVRDMVVSYKQMPLNLYQIQTKFRDEIRPRFGLMRSR 156

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
            F        D    + +     +     + L+  G
Sbjct: 157 EFIMKDAYSFDENLENLQKNYDMVSQAYCNILKRCG 192



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 31/97 (31%), Gaps = 2/97 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++I     +   +   +     L + GI   +   + +  G++ K A+ 
Sbjct: 494 IWPLAIAPYHAIIIVPNVKEKQQMEIAEKIYYDLNSIGIETILDDRTER-IGSKFKDAEL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              P  I+ G      G +++ D          I+  
Sbjct: 553 IGIPYQIVTG-RTLKFGKVEVVDRKTKNSQEVIIEEL 588


>gi|238504300|ref|XP_002383381.1| threonyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|317138130|ref|XP_001816697.2| threonyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|220690852|gb|EED47201.1| threonyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 721

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R+ Y   G+  ++TP +   D  + K           +F 
Sbjct: 316 GCPFLLPNGTKIFNALQTLLRSEYRKRGYQEVQTPNM--YDVGIWKTSGHWAHYKDDMFK 373

Query: 73  LQDDDGQWISLRYDLTAP 90
           L D + +  +L+      
Sbjct: 374 L-DVEKREWALKPMNCPG 390



 Score = 40.2 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 13/128 (10%), Positives = 40/128 (31%), Gaps = 18/128 (14%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 I     +++  M   +D + + Q     LR   +  ++ +  +     +++   
Sbjct: 607 GKWPFWISPRQILIVPVMPAVNDYVEELQTI---LRGDKLNVDIDISGN-TMQKKIRTGQ 662

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                   + G  E+    + I++                    +   + IP+ E    +
Sbjct: 663 LAQYNFIFVVGAQEKEARTVNIRNRDD--------------PATQKQGVMIPLEEAREKL 708

Query: 486 KKILQENK 493
           + + +E +
Sbjct: 709 RALRKERR 716


>gi|196249826|ref|ZP_03148522.1| glycyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196210702|gb|EDY05465.1| glycyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 460

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/239 (7%), Positives = 62/239 (25%), Gaps = 10/239 (4%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  K      +  K  +       E + + +  ++   + +           
Sbjct: 224 LEFFCKPGEELKWFDYWKQFCKEWLLSLGMNEEHIRLRDHTKEELSHYSNATTDIEYQFP 283

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   + +    +              +  +      ++ A   ++     
Sbjct: 284 FGWGELWGIASRTDYDLKQHMEHSGEDFHYLDQETNERYIPYCIEPSLGADRVTLAFMID 343

Query: 359 IVALKSLES-----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + LE        +    + P     +          +   + L        +    
Sbjct: 344 AYDEEELEDGTTRTVMHLHPALAPYKAAVLPLSKKLGDGARRIYEELAKH---FMVDYDE 400

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + + G + +  D    P  I         G + ++D    +++   I   +++ + ++A
Sbjct: 401 TGSIGKRYRRQDEIGTPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGELKAFLDKKIA 459


>gi|189466356|ref|ZP_03015141.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM
           17393]
 gi|189434620|gb|EDV03605.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM
           17393]
          Length = 646

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/461 (10%), Positives = 109/461 (23%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +                           
Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQARYDYQEV--------------------------- 293

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                         +T P+                    G   +  K          + +
Sbjct: 294 --------------ITPPI-----------GNKLLYITSGHYAKYGKDSFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      + + +             R    G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCMIYKNSPRSYKDL-----------PLRLAEFGTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMEFANVEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DENWERAEQAIIEACEEKGLTARIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   + +              D    R    +    G    + R +  L    +    
Sbjct: 495 NLPERFDLEYTGA----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 541

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +          Q   + L+   IRA +    ++  G +++  + +  P 
Sbjct: 542 LW-LTPEQVAILPISEKFNDYAQEVKKFLKQYDIRAIVD-ERNEKIGRKIRDNELKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +I G  E     + ++   +G + + + +         V 
Sbjct: 600 MLIVGEKEAENREVSVRKQGEGDKGTMKFEEFAKILNEEVQ 640


>gi|307328733|ref|ZP_07607905.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306885682|gb|EFN16696.1| threonyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 412

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G          +R+ + + IR+     G+  + +P+L   +   +        +  +F  
Sbjct: 23 GLPYWLPDGATVRHTLEEYIRDAERRAGYRHVYSPVLGKRELY-ELSGHWSHYSDDMFPP 81

Query: 74 QDDDGQWISLRYDLTA 89
           +   + + LR  L  
Sbjct: 82 MELGAEQVVLRPSLCP 97



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 49/157 (31%), Gaps = 22/157 (14%)

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
           R +   V  +        +   ++    +           +  +      L   +   + 
Sbjct: 268 RHRPVMVHRSIIGSVERAVAHLIEEHGGAFPAWLAPTQ--LVVLPISEAELPHAEALVRR 325

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
               G+RAE+      + G +++ A     P   + G  E     + ++ L  G+ L   
Sbjct: 326 CVDLGLRAELAGPERGSLGARIREARL--VPYQAVVGAREAGDDRVALR-LRDGRRLD-- 380

Query: 460 IKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           +P+ E +S +  +++ +  E+
Sbjct: 381 ---------------PLPVGEALSRINALVKAHSNEL 402


>gi|283954167|ref|ZP_06371692.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794446|gb|EFC33190.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 568

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 34  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 88

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 89  FGKELLRFKDRKENEFVLGP 108



 Score = 41.4 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 85/284 (29%), Gaps = 34/284 (11%)

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVS---FLSIDLEKSMHELYEL-VKGTIAGEKGFN 270
           L E +  N+ +  +  N   E+++ +     F+     K +    +  ++       G N
Sbjct: 305 LQEVKAQNACNALELVNANEEELEKVGLTPGFIGFIGLKDIDFYIDFELENEKQMIMGAN 364

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           E       +     N +R K    +V   +        A L      E       G    
Sbjct: 365 EKDYHLVGIDVVNLNKDRFK---DLVEVKQGDCCAKCGAKLKQSKGIEVGHIFKLGQKYS 421

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV-------LITTM 383
                  +           G        ++A+    +          V       +I + 
Sbjct: 422 KAMNANFLDENGKSQPFYMGCYGIGISRLLAVAIEANHDEKGCIWNKVLAPFVLEIIVSN 481

Query: 384 DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
             D  +L       + L   G+   +   + + FG ++   +    P A++ G G     
Sbjct: 482 IKDEKALEFANKLYEDLTKLGLEVLLDDRNER-FGVKMNDFELMGFPYALVIGKG-LENN 539

Query: 444 MLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
            ++   L + + L++E+               + I EL+  +KK
Sbjct: 540 EVE---LIQREALTKEL---------------VKIDELMEILKK 565


>gi|119476522|ref|ZP_01616873.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450386|gb|EAW31621.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 645

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   I   I   +R       +  I+TP L       K     D+ 
Sbjct: 255 MQEEAP-GMVFWHPKGWSIYTTIESYMREQQTLNNYQEIKTPQLVDFSLWQKS-GHADKF 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              +F+L+  DG+  +++        +   +   +    P R    G   RNE  G   
Sbjct: 313 GDDMFTLE-ADGRDFAIKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH 370



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +   +         +   Q L+ +GIR +  L  ++  G +++    +  P  +
Sbjct: 535 WLAPTQVVIANITDKQAPYVKKVHQSLKNSGIRVDADL-RNEKIGFKIREHIIQKVPYLL 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  E     + ++
Sbjct: 594 VVGDKEIENQTVAVR 608


>gi|297613111|ref|NP_001066707.2| Os12g0443700 [Oryza sativa Japonica Group]
 gi|77554943|gb|ABA97739.1| Bifunctional aminoacyl-tRNA synthetase, putative, expressed [Oryza
           sativa Japonica Group]
 gi|215697485|dbj|BAG91479.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740854|dbj|BAG97010.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186797|gb|EEC69224.1| hypothetical protein OsI_38226 [Oryza sativa Indica Group]
 gi|222617028|gb|EEE53160.1| hypothetical protein OsJ_35987 [Oryza sativa Japonica Group]
 gi|255670276|dbj|BAF29726.2| Os12g0443700 [Oryza sativa Japonica Group]
          Length = 510

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 55/166 (33%), Gaps = 22/166 (13%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS----DSL 390
           D        QN  A         ++                  V++  + +        +
Sbjct: 272 DKGSRSMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPRVAPLQVIVIPVPYKDVDTTAIV 331

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
           ++ +   + L  AGIRA++    + + G +  + + +  PL I  G  + +    ++   
Sbjct: 332 NECKKTVETLEKAGIRADLDTRENYSPGWKYSHWEMKGVPLRIEIGPKDMANNQARV--- 388

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           R    A+  IP ++LV  V  +L E ++ +
Sbjct: 389 ---------------VRRDNGAKADIPTADLVEKVNGLLDEVQKNL 419


>gi|224539835|ref|ZP_03680374.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518545|gb|EEF87650.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 519

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/461 (10%), Positives = 110/461 (23%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +                           
Sbjct: 134 KGLPMWLPKGTALRLRLQEFLRRIQARYDYQEV--------------------------- 166

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                         +T P+                    G   +  K          + +
Sbjct: 167 --------------ITPPI-----------GNKLLYITSGHYAKYGKDSFQPIHTPEEGE 201

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      + + +             R    G + +    G+     
Sbjct: 202 EYFLKPMNCPHHCMIYKNSPRSYKDL-----------PLRLAEFGTVCRYEQSGELHGLT 250

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK          S  F        E    +   ++ +     
Sbjct: 251 RVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMDFANVEAQISLRDKVNREKYIGS 310

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  + +I        L    E    + Y       +   I R  +  T    +   
Sbjct: 311 DENWERAEQSIIEACEEKGLSARIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 367

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   E +              D    R    +    G    + R +  L    +    
Sbjct: 368 NLPERFELEYTGA----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 414

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +          Q   + L+   IRA +    ++  G +++  + +  P 
Sbjct: 415 LW-LTPEQVAILPISEKFNDYAQEVKKFLKQYDIRAIVD-ERNEKIGRKIRDNELKRIPY 472

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +I G  E     + ++   +G + + + +         V 
Sbjct: 473 MLIVGEKEAENREVSVRKQGEGDKGTMKFEEFAKILNEEVQ 513


>gi|51473419|ref|YP_067176.1| threonyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|73919822|sp|Q68XE8|SYT_RICTY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|51459731|gb|AAU03694.1| Threonine translase [Rickettsia typhi str. Wilmington]
          Length = 635

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/269 (11%), Positives = 77/269 (28%), Gaps = 22/269 (8%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +T E +        +  +    ++            G +E+   +E   
Sbjct: 381 DDAHIFCAEEQITDETVRFCKLLTEVYKDFGFTDIKVKFSDRPEIRAGNDEVWDKAEHAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           K+         +     G  Y     +  +        +   +    V         ++ 
Sbjct: 441 KTAVEKVGFIYTLNPGDGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLPERLDANYIAA 499

Query: 341 FKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +  P       +G     + +   E +      + PV +      +D         +
Sbjct: 500 SGEKKRPVMLHRAILGSLERFIGILIEEYAGKFPIWLAPVQVAIATITNDLNDYALEVQK 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L    IR ++ +   K    +++    +  P+  + G  E++   + I+          
Sbjct: 560 TLIDNNIRTDINISPDK-INYKIREFSNQKIPMIAVIGKKEQANKQVTIR---------- 608

Query: 459 EIKNNESWREARVAQITIPISELVSTVKK 487
                   +     Q  + I +L++ +KK
Sbjct: 609 --------KFGTTGQEILSIEQLIAMIKK 629



 Score = 43.7 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +      +    +F+L
Sbjct: 261 GMVFWHDKGWSIYNTIEQYIRKKNRKNGYIEVKTPVLVDK-SLWEASGHWAKFRCDMFTL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 ET-DDKILALKPMNCP 334


>gi|323337178|gb|EGA78432.1| Ths1p [Saccharomyces cerevisiae Vin13]
          Length = 734

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 43/143 (30%), Gaps = 23/143 (16%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             + A+ +   +      + P  +  +          +     L  AG  A++ L  +  
Sbjct: 607 ERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYADVDLTGNTL 666

Query: 417 FGN----QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  Q+            I G  E +   + I++    ++              +  
Sbjct: 667 QKKVRNGQM-----LKYNFIFIVGEQEMNEKSVNIRNRDVMEQ--------------QGK 707

Query: 473 QITIPISELVSTVKKILQENKEE 495
             T+ + E++  ++ +  E + +
Sbjct: 708 NATVSVEEVLKQLRNLKDEKRGD 730



 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D +R  Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 352 WLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 410

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 411 -ETFGLKPMNCPG 422


>gi|313679172|ref|YP_004056911.1| prolyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313151887|gb|ADR35738.1| prolyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 478

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 34/97 (35%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V I   +     L   +   + +R AG+R  +      + G +    + +  PL I  G 
Sbjct: 293 VPIYRKNTREVVLEAARELVREIRAAGVRVHLDDRDQYSPGYKFNEWELKGVPLRIEIGP 352

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +   G   +K    G++    +++       R+   
Sbjct: 353 RDVEAGHAVLKSRLGGEKEFIGLRDLPGLLPERLEGF 389


>gi|38639683|ref|NP_943452.1| theronyl-tRNA synthetase [Klebsiella pneumoniae]
 gi|38016781|gb|AAR07802.1| theronyl-tRNA synthetase [Klebsiella pneumoniae]
 gi|238549656|dbj|BAH66007.1| theronyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 345

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M          +   + LR  G+R E  L  ++  G +++       P  +
Sbjct: 241 WLSPVQAVVMTITDKQHRYAEQVLKALRRKGLRCETDL-RNEKIGYKIREQTLARIPFLL 299

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           I G  E +   + ++D   GK
Sbjct: 300 IIGDAEENAARVTVRD-RTGK 319


>gi|86153499|ref|ZP_01071703.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85843225|gb|EAQ60436.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 569

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 35  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 89

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 90  FGKELLRFKDRKENEFVLGP 109



 Score = 37.9 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 75/283 (26%), Gaps = 31/283 (10%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-VKGTIAGEKGFNE 271
             +      ++ +    +    E+  ++  F+     K +    +  ++       G NE
Sbjct: 307 QEIKAQNACSALELVDASEEELEKAGLVAGFIGFVGLKDIDFYIDFELENEKQMIMGANE 366

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
                  +     N +R K    ++   E        A L      E       G     
Sbjct: 367 KDYHLIGIDVVNLNKDRFK---DLIEVKEGDCCVKCGAKLKQSKGIEVGHIFKLGQKYSK 423

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMD- 384
                 +           G        ++A+             N       + I   + 
Sbjct: 424 AMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCIWNKTLAPFVLEIIVSNL 483

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D  +L       + L   G+   +   + + FG ++   +    P A++ G G      
Sbjct: 484 KDEKALEFANKLYEDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVIGKG-LENNE 541

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           +++           + ++             I   EL+  +KK
Sbjct: 542 IEL----------IQREDLVKEL--------IKTDELMEILKK 566


>gi|34580760|ref|ZP_00142240.1| threonyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262145|gb|EAA25649.1| threonyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 635

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/382 (9%), Positives = 95/382 (24%), Gaps = 10/382 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           +F         +                ++  +     V        +    +       
Sbjct: 254 HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASGHWEKFR 313

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D + A+        +   N      I ++      D                   L G+ 
Sbjct: 314 DDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +T E +        +  +    ++            G NE+
Sbjct: 373 MRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEIRAGSNEV 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E   K          +     G  Y     +  +        +   +    V    
Sbjct: 433 WDKAENALKEAVEQAGFNYTLNPGEGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLPER 491

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                V+    +  P       +G     + +   E +      + PV +      SD  
Sbjct: 492 LDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWLAPVQVAIATITSDLN 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G+R ++ +   K    +++    +  P+  + G  E+    + I+ L
Sbjct: 552 DYALEVQKALIDNGVRTDVNISPDK-INYKIREFSNQKIPMIAVIGKQEQENKQVAIRRL 610

Query: 451 AKGKELSREIKNNESWREARVA 472
               +    ++   +  +    
Sbjct: 611 GTTDQEVLSVEQLIAVVKEENE 632



 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +     ++    +F+L
Sbjct: 261 GMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK-SLWEASGHWEKFRDDMFAL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 ET-DDKTLALKPMNCP 334


>gi|312135208|ref|YP_004002546.1| glycyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775259|gb|ADQ04746.1| glycyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 434

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 32/106 (30%), Gaps = 3/106 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +         +  +    + + K +     L     +  +    S + G + +  D 
Sbjct: 329 LHLHPAIAPIKAAVFPLLKKEELVKKAKEIYNEL---KYKWIVQYDESGSIGKRYRRQDE 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P  I           + I+D    +++   IK   S+ E R+ 
Sbjct: 386 IGTPFGITVDYQTLEDETVTIRDRDTMEQVRVHIKEIISYLEERIE 431


>gi|83764551|dbj|BAE54695.1| unnamed protein product [Aspergillus oryzae]
          Length = 717

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R+ Y   G+  ++TP +   D  + K           +F 
Sbjct: 312 GCPFLLPNGTKIFNALQTLLRSEYRKRGYQEVQTPNM--YDVGIWKTSGHWAHYKDDMFK 369

Query: 73  LQDDDGQWISLRYDLTAP 90
           L D + +  +L+      
Sbjct: 370 L-DVEKREWALKPMNCPG 386



 Score = 40.2 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 13/128 (10%), Positives = 40/128 (31%), Gaps = 18/128 (14%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 I     +++  M   +D + + Q     LR   +  ++ +  +     +++   
Sbjct: 603 GKWPFWISPRQILIVPVMPAVNDYVEELQTI---LRGDKLNVDIDISGN-TMQKKIRTGQ 658

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                   + G  E+    + I++                    +   + IP+ E    +
Sbjct: 659 LAQYNFIFVVGAQEKEARTVNIRNRDD--------------PATQKQGVMIPLEEAREKL 704

Query: 486 KKILQENK 493
           + + +E +
Sbjct: 705 RALRKERR 712


>gi|21222189|ref|NP_627968.1| threonyl tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|10432482|emb|CAC10316.1| putative threonyl tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 430

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 45/167 (26%), Gaps = 8/167 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R+ + + +R      G+  + +P+L   +   +     +     +F  
Sbjct: 48  GLPYWLPDGAVVRHTLEEYVREAERRAGYRHVYSPVLGKRELY-EISGHWEHYRDDMFPP 106

Query: 74  QDDDGQWISLRYDLTA-------PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            +   + + LR  L           AR   E    I      YR  P          R  
Sbjct: 107 MELGAEEVVLRPSLCPHHALVYRSRARSYRELPLRIAELGAMYRSEPSGVLGGLSRVRAI 166

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                 +      A         ++      +GI+   + + +    
Sbjct: 167 HLNDAHIFCTPDQAAAEARAALGLIRRAHADLGIRAARHRLSLPGPG 213



 Score = 44.1 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 12/136 (8%)

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
           R +   V  +        +   +++   +      + PV +  +              + 
Sbjct: 291 RHRPVMVHRSVIGSVERAVAHLIEAHGGAFPAW--LAPVQLVVLPVAGAQREAAYALVRQ 348

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG---MLQIKDLA----- 451
               G+RAE+      + G +++ A  R  P   + G  E   G    ++++D       
Sbjct: 349 ATDLGLRAEVADPERGSLGARVRAA--RKVPYQAVIGVREAQDGDLVDVRLRDGRRPGQL 406

Query: 452 KGKELSREIKNNESWR 467
            G EL   I +    R
Sbjct: 407 SGTELLHRITDRVEAR 422


>gi|325662226|ref|ZP_08150841.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471478|gb|EGC74699.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 462

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/228 (7%), Positives = 61/228 (26%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     ++      E + + +   +     ++       +    +        
Sbjct: 237 EWFAYWKKFCLDWLSSLGLKEEEIRVRDHSPEELCFYSKATSDVEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES-- 367
              + +   ++      +     + +  +      ++ A    +         + LE   
Sbjct: 297 RTDYDLSQHQEVSKQDLTYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGD 356

Query: 368 ---STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P+ I  +          +     L +     E       N G + +  
Sbjct: 357 TRTVMHFHPALAPIKIGVLPLSKKLNEGAEKVFAEL-SKTYNCEFD--DRGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + ++D    ++   +I++ +++ E +  
Sbjct: 414 DEIGTPFCVTYDFESEEDGAVTVRDRDTMEQERIKIEDLKAYFEKKFE 461


>gi|309389227|gb|ADO77107.1| prolyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 568

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 29/103 (28%), Gaps = 4/103 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++  +I    R   +N     +  P+++ S    K     D+    +  
Sbjct: 37  SGIYSYLPLGYKVIKKIEKIARKHMDNSEAQEVLLPIMQDSQI-WKDSKRWDKFGPLMIK 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
             D   +   L     ++   L R    ++  +       +  
Sbjct: 96  FNDRKNREFCLGPTHEEVVTDLVRDEVRSYKDLPLNLYQIQTK 138



 Score = 37.9 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 1/112 (0%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          ++I  + +D +  +K +   Q L+  G    +     +  G +  
Sbjct: 457 DQYGIKWPKAIAPYQIIILPLGNDDEVQTKSEAIYQDLKAKGWEVLIDDRKERA-GVKFN 515

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            ++    PL +  G+     G+++        +   E++  E+  EA  A I
Sbjct: 516 DSELIGIPLRLTIGSRSLKNGVVEAMTRENNMKTEIELEQLETKIEALFAGI 567


>gi|229027206|ref|ZP_04183484.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228734095|gb|EEL84811.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 101

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 375 MGPVLITTMDHDSD-SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           M PV +  +   +   +         L  AGIR E  +   K  G +++ A  +  P  +
Sbjct: 1   MAPVQVKVIPVSNAVHVQYANEVAHKLAQAGIRVEEDIRDEK-LGYKIREAQMQKVPYVL 59

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIK 461
           + G  E     + ++    G+E S+ ++
Sbjct: 60  VIGDKEMESEAVNVR--KYGEEESKIVE 85


>gi|317471035|ref|ZP_07930410.1| prolyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316901476|gb|EFV23415.1| prolyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 478

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 58/188 (30%), Gaps = 11/188 (5%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                F     K   + +       +Y    S      +      +      + L     
Sbjct: 231 GTSHNFGDGFAKAFDIQYTDKNNKLQYVHQTSWGMSTRIIGAIIMVHGDDSGLVL----- 285

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I  +  +++  M      L K +   + L +   + ++   S K+ G +    + +
Sbjct: 286 -PPKIAPVQTMIVPIMQKKEGVLEKAEEIRERL-SKNYKVKVD-DSDKSPGWKFSEQEVQ 342

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P  I  G  +  +    I      +++   +   ES     + Q+     +++   KK
Sbjct: 343 GIPTRIEIGPKDIEKNQAVIVRRDTREKIFVSLDEIESKLSEVLDQM---QKDMLERAKK 399

Query: 488 ILQENKEE 495
            L+EN  E
Sbjct: 400 HLEENTHE 407


>gi|312622367|ref|YP_004023980.1| glycyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202834|gb|ADQ46161.1| glycyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 434

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 31/106 (29%), Gaps = 3/106 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +         +  +    + + K +     L     +  +    S + G + +  D 
Sbjct: 329 LHLHPAIAPVKAAVFPLMKKEELVKKAREIYNEL---KYKWIVQYDESGSIGKRYRRQDE 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P  I           + I+D    +++   IK    + E R+ 
Sbjct: 386 IGTPFGITVDYQTLEDETVTIRDRDTMEQVRVHIKEIIPYLEERIE 431


>gi|312127540|ref|YP_003992414.1| glycyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777559|gb|ADQ07045.1| glycyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 434

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 31/106 (29%), Gaps = 3/106 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +         +  +    + + K +     L     +  +    S + G + +  D 
Sbjct: 329 LHLHPAIAPVKAAVFPLMKKEELVKKAREIYNEL---KYKWIVQYDESGSIGKRYRRQDE 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P  I           + I+D    +++   IK    + E R+ 
Sbjct: 386 IGTPFGITVDYQTLEDETVTIRDRDTMEQVRVHIKEIIPYLEERIE 431


>gi|297531631|ref|YP_003672906.1| glycyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297254883|gb|ADI28329.1| glycyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 460

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/239 (7%), Positives = 63/239 (26%), Gaps = 10/239 (4%)

Query: 241 VSFLSIDLEK--SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E+   +    +  K  +       + + + +  ++   + +           
Sbjct: 224 LEFFCKPGEELQWLEYWKQFCKEWLLSLGMKEDNIRLRDHAKEELSHYSNATTDIEYHFP 283

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   + +    +              +  +      ++ A   ++     
Sbjct: 284 FGWGELWGIASRTDYDLKRHMEYSGEDFHYLDQETNERYIPYCIEPSLGADRVTLAFMID 343

Query: 359 IVALKSLES-----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + LE        +    + P     +          +   + L        +    
Sbjct: 344 AYDEEELEDGTTRTVMHLHPALAPYKAAVLPLSKKLADGARRIYEELAKH---FMVDYDE 400

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + + G + +  D    P  I         G + ++D    +++   I   +++ E ++A
Sbjct: 401 TGSIGKRYRRQDEIGTPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGELKAFLEEKIA 459


>gi|269219508|ref|ZP_06163362.1| glycine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211087|gb|EEZ77427.1| glycine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 465

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 24/85 (28%), Gaps = 3/85 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  D       +     LR      +     +   G + +  D    P  I      
Sbjct: 374 VLPLSRDERLSPLARELAAELRK-NWNVDFD--DAGAVGRRYRRQDEIGTPFCITVDFDS 430

Query: 440 RSRGMLQIKDLAKGKELSREIKNNE 464
                + I+D    +++   I + E
Sbjct: 431 LEDRAVTIRDRDTMEQVRLPIADVE 455


>gi|308061592|gb|ADO03480.1| prolyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 577

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 10/122 (8%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + LR  
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IK--DLAKGKELSREI 460
           G+ A +    ++ FG +++  +     LA+I G         + IK  +L K      E+
Sbjct: 508 GVDALLDDRDAR-FGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKRTLKDTEL 566

Query: 461 KN 462
           + 
Sbjct: 567 EE 568



 Score = 46.8 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|256786722|ref|ZP_05525153.1| threonyl tRNA synthetase [Streptomyces lividans TK24]
 gi|289770616|ref|ZP_06529994.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289700815|gb|EFD68244.1| threonyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 421

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 45/167 (26%), Gaps = 8/167 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +R+ + + +R      G+  + +P+L   +   +     +     +F  
Sbjct: 39  GLPYWLPDGAVVRHTLEEYVREAERRAGYRHVYSPVLGKRELY-EISGHWEHYRDDMFPP 97

Query: 74  QDDDGQWISLRYDLTA-------PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            +   + + LR  L           AR   E    I      YR  P          R  
Sbjct: 98  MELGAEEVVLRPSLCPHHALVYRSRARSYRELPLRIAELGAMYRSEPSGVLGGLSRVRAI 157

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                 +      A         ++      +GI+   + + +    
Sbjct: 158 HLNDAHIFCTPDQAAAEARAALGLIRRAHADLGIRAARHRLSLPGPG 204



 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 12/136 (8%)

Query: 340 RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
           R +   V  +        +   +++   +      + PV +  +              + 
Sbjct: 282 RHRPVMVHRSVIGSVERAVAHLIEAHGGAFPAW--LAPVQLVVLPVAGAQREAAYALVRQ 339

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG---MLQIKDLA----- 451
               G+RAE+      + G +++ A  R  P   + G  E   G    ++++D       
Sbjct: 340 ATDLGLRAEVADPERGSLGARVRAA--RKVPYQAVIGAREAQDGDLVDVRLRDGRRPGQL 397

Query: 452 KGKELSREIKNNESWR 467
            G EL   I +    R
Sbjct: 398 SGTELLHRITDRVEAR 413


>gi|159905128|ref|YP_001548790.1| glycyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|238686948|sp|A9A885|SYG_METM6 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|159886621|gb|ABX01558.1| glycyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 574

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 33/116 (28%), Gaps = 20/116 (17%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  + +              LR  G+ AE     S   G +    D    P  I
Sbjct: 479 SPIKVGVFPLVNKEGMPEIAMDLKNKLRENGLIAE--YDDSGAIGRRYMRMDEVGTPFCI 536

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
                      + I++                      AQ  IPI+E+VS +K  L
Sbjct: 537 TIDGETLVDNSVTIRERDSR------------------AQFRIPINEVVSYIKDKL 574



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++N ++++ R  Y  N GF  I++P +   + L    
Sbjct: 29 GFFDYGPLGAILKNNVINTWRKHYIVNEGFYEIDSPTVTPYEVLKASG 76


>gi|315103267|gb|EFT75243.1| glycyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
          Length = 506

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +SD   K +     LR      +     ++  G + +  D    P  I      
Sbjct: 415 VLPLSRNSDLSPKARDLAARLREH-WNVDFD--DAQAIGKRYRRQDEIGTPFCITVDFDS 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++     +    I   E +   R
Sbjct: 472 LEDDAVTVRERDTMAQQRVSIDKVEEYLGGR 502


>gi|170748342|ref|YP_001754602.1| threonyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170654864|gb|ACB23919.1| threonyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 675

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/360 (13%), Positives = 100/360 (27%), Gaps = 16/360 (4%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
              S       E         E    KR      +N    +      +  + D  L    
Sbjct: 303 WETSGHWGWYRENMFAAQSAGEEAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAE 362

Query: 195 IVL--RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             +  R        GL  V+        D++  F     L  E + I    LS   +   
Sbjct: 363 FGIVHRYEPSGAMHGLMRVRG----FTQDDAHVFCTEDQLADECLKINDLILSTYADFGF 418

Query: 253 HELYELVKGTIA----GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            ++   +          +  ++    +   V       +  +I + +  G   + G  +E
Sbjct: 419 DQIVVKLSTRPEKRVGSDALWDHAEDVMTRVLAQIEEQSGGRIRTAVNPGEGAFYGPKFE 478

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKS 364
            +L   +  + Q            R+        G   P           + R    L  
Sbjct: 479 YVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGARKPPVMVHRAICGSMERFTGILIE 538

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +    +  + PV +       ++ +  +   + L  AG+R E  L  ++    +++  
Sbjct: 539 HFAGHFPLW-LAPVQVVVATITGEADAYARDVIRTLERAGLRVEADL-RNEKINYKVREH 596

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                P+ +  G  E     + I+ L   +  +  +    +          I  +E V+ 
Sbjct: 597 SLAKVPVLLALGRREAEERTVSIRRLGSQQTRTLPLTEAVAAFVEEATAPDIRRAEAVAA 656


>gi|314923081|gb|EFS86912.1| glycyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 506

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +SD   K +     LR      +     ++  G + +  D    P  +      
Sbjct: 415 VLPLSRNSDLSPKARDLAARLREH-WNVDFD--DAQAIGKRYRRQDEIGTPFCVTVDFDT 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++     +    I   E +   R
Sbjct: 472 LEDDAVTVRERDTMAQQRVSIDKVEEYLGGR 502


>gi|313114719|ref|ZP_07800221.1| ATP phosphoribosyltransferase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622944|gb|EFQ06397.1| ATP phosphoribosyltransferase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 536

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 59/154 (38%), Gaps = 9/154 (5%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           +R +YE  G         E      +        ++ V +  D DG+ ++L+ D+T  +A
Sbjct: 23  LRALYEAAGCRKYHMGRFEEYGLYQEN--RSFLSSEQVITFTDLDGRLLALKPDVTLSIA 80

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           +               Y               F++  Q  ++ +G+  E    +   + A
Sbjct: 81  KTA----QPAPSETLCYYYHENVYRPSAESHTFKEISQMGLEMLGAVGEAQVQQAVCLAA 136

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
            +L+A+G    ++ + +++   L G+ + +G+  
Sbjct: 137 RSLDALGA---EWVLEVSHMGYLFGLFDALGVPD 167


>gi|305663775|ref|YP_003860063.1| glycyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378344|gb|ADM28183.1| glycyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 585

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 19/66 (28%)

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + G +  YAD    P  +        R    I+D    K++   I       +  
Sbjct: 510 YIEGGSIGKKYAYADELGIPYVVTVDYESIERADATIRDRDTRKQIRVPINELTRVLDMA 569

Query: 471 VAQITI 476
           +    I
Sbjct: 570 LKGEDI 575


>gi|254525537|ref|ZP_05137589.1| ATP phosphoribosyltransferase [Prochlorococcus marinus str. MIT
           9202]
 gi|221536961|gb|EEE39414.1| ATP phosphoribosyltransferase [Prochlorococcus marinus str. MIT
           9202]
          Length = 383

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 117/360 (32%), Gaps = 46/360 (12%)

Query: 37  YENYGFDPIETPLLEYSDSL-GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYV 95
           Y+ +G++ +    +   +++ G+ + +E+R    V          + LR ++T  + +  
Sbjct: 26  YKVWGYEEVSPSFINTLETIKGRGVIEENRVVGIV------SNNSLCLRPEMTTSIVKLS 79

Query: 96  AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL 155
           +        P R +  G VF  +++    F+   +          +T   E+ ++     
Sbjct: 80  STRLINKKRPIRLFTNGMVFDKKQNNKNSFKLQEKLQSGIELIGYDTKYPEIEVINI--- 136

Query: 156 EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
                              L   ++ I L     L+  +   + +D +           +
Sbjct: 137 -------------------LFDAIDNINLKDGCNLSLLVSTTKIMDLILNKYKNNNFEEI 177

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVI 275
            +   +   D      +  +   I+   L    E     + + +K T    K  ++L  +
Sbjct: 178 KKCLVNFDQDNLSKLGINEDDKYILKDILFTRGEP--LTILKKLKTTYGTSKTLDDLNFL 235

Query: 276 SELV-RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
            E + + S      +++  T    L  Y G V++ I                 +  GGRY
Sbjct: 236 FETLSKISNKYGVNLQLDPTFQPHLNLYEGIVFQLI--------GDDGKNKSVIAKGGRY 287

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D LV  F        G    IS  I+       +  + ++     I  M  DS  L K  
Sbjct: 288 DELVRFFSPNEKILNGIGFTISLDIL------RNIISQEKADKKKILLMFKDSYLLEKAM 341


>gi|315635814|ref|ZP_07891076.1| proline--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479793|gb|EFU70464.1| proline--tRNA ligase [Arcobacter butzleri JV22]
          Length = 568

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 73/252 (28%), Gaps = 16/252 (6%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D S D  K A L +    +     +I+    +    E+     A E+ ++ +      ++
Sbjct: 319 DASEDDIKEAGLVAGYCGLFNLPSNINFIIDLELKDEIGLACGANEEDYHLVNTDLSTLK 378

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
              Y          I               L +    E       G+          +  
Sbjct: 379 DVKYYDLIAVQEGDIC--------ACCGGKLSYRKGIEAGHIFQLGTKYSSAMNANFLDE 430

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG------PVLITTMDHDSDSLSKY- 393
                    G        +VA    ++  +             V I   +   +  +K  
Sbjct: 431 NGKAKPFIMGCYGIGVSRLVAAVIEQNHDDKGCVWTKATAPFMVDIIVSNSKKEEEAKVG 490

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +     L+ AGI   +    +  FG ++   +    P A++ G      G+++I D    
Sbjct: 491 EELYSKLKQAGISTILDDRINARFGFKMSDFELLGFPYAVVIGKK-LEDGLVEIVDRKTL 549

Query: 454 KELSREIKNNES 465
           +++  ++    S
Sbjct: 550 EKIDLKVDEVIS 561



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 24/83 (28%), Gaps = 9/83 (10%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIE----TPLLEYSDSLGKFLPD 62
             A+   G  D       +  +I   ++   +  G + ++    TPL     +L +    
Sbjct: 31  FIAQTGAGIYDFMPLGKIVLEKIRTIVKEEMDEAGANEVQFGFVTPL-----TLWQESGR 85

Query: 63  EDRPNKGVFSLQDDDGQWISLRY 85
                  +   +D       L  
Sbjct: 86  ATTMGAEMLRFKDRKNGEFVLSP 108


>gi|227833256|ref|YP_002834963.1| Threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184240|ref|ZP_06043661.1| threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254783518|sp|C3PGS1|SYT_CORA7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|227454272|gb|ACP33025.1| Threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 687

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 37/117 (31%), Gaps = 8/117 (6%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +          +     LR+ G+RA++     +    +++       P  +
Sbjct: 574 WLAPHQVVGIPVADTFAPHLEKVCAELRSRGLRADVDTSDDR-MQKKIRNHTTGKVPFML 632

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELVSTV 485
           + G  +     +  + L  G +     +   +   E+W   R  +       +   V
Sbjct: 633 LAGERDVEADAVSFRFL-DGTQVNGVPVEAAVNVIEAWVRERNNEQP-TKDSIAERV 687



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 1/68 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            GF         +R  + +  R  +   G+  + TP L   D   K     D    G+F 
Sbjct: 285 SGFPVFHPNGATVRMEMEEHSRRRHIADGYSFVSTPHLTKGDLFKKS-GHLDFYADGMFP 343

Query: 73  LQDDDGQW 80
               DG+W
Sbjct: 344 PMQLDGEW 351


>gi|50751644|ref|XP_422493.1| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative) [Gallus gallus]
          Length = 470

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I     N G   +  P L  ++ L +     ++    +F L D  
Sbjct: 85  LLPPAVRSMEKLIRLIDGAMRNIGGQKVNMPSLSSAE-LWRTSGRWEQMGPELFRLADRH 143

Query: 78  GQWISLRY 85
           G+   L  
Sbjct: 144 GKEYCLGP 151



 Score = 37.5 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 396 YTQML-RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
             + L R AG    +   +    G +LK A++   P  ++ G
Sbjct: 392 VAEALPRLAG-DVVLDDRTQMTIGKRLKDANKLGYPYVVVAG 432


>gi|167759625|ref|ZP_02431752.1| hypothetical protein CLOSCI_01983 [Clostridium scindens ATCC 35704]
 gi|167662751|gb|EDS06881.1| hypothetical protein CLOSCI_01983 [Clostridium scindens ATCC 35704]
          Length = 480

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 19/128 (14%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
             ++  +   +I    H    L +       L+ AG R ++   S K+ G +    +   
Sbjct: 286 PPHVAPVECRIIPIAQHKEGVLDRSFALLDELKKAGYRVKID-DSDKSTGWKFSEQEMLG 344

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            P  I  G  +  +  + +                   R     +I + + E+   ++ I
Sbjct: 345 IPTRIEIGPKDIEKNQVVV------------------VRRDNREKIVVSLDEIAVKLRDI 386

Query: 489 LQENKEEI 496
           L++ ++++
Sbjct: 387 LEQEQQDM 394


>gi|124027657|ref|YP_001012977.1| bifunctional aminoacyl-tRNA synthetase [Hyperthermus butylicus DSM
           5456]
 gi|123978351|gb|ABM80632.1| Bifunctional aminoacyl-tRNA synthetase [Hyperthermus butylicus DSM
           5456]
          Length = 380

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         ++R RI++ +R + ++ G + I  PLL     L K           V
Sbjct: 33  PVKGMGIWLPYGFQLRRRIIELVREVLDSTGHEEILMPLLIPEHLLRKESEHIRGFEGEV 92

Query: 71  FSLQDDDGQW-----ISLRY 85
           +      G       ++LR 
Sbjct: 93  Y-WVTHGGHEPLDVKLALRP 111


>gi|50294994|ref|XP_449908.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49529222|emb|CAG62888.1| unnamed protein product [Candida glabrata]
          Length = 726

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D +R+ Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 343 WLPHGTRIYNTLVDLLRSEYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 401

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 402 -ETFGLKPMNCPG 413



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 40/373 (10%), Positives = 103/373 (27%), Gaps = 36/373 (9%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           N+ +S     +       + +    +++  + +   N      + +       +      
Sbjct: 374 NMYNSKLWETSGHWANYKENMFTFEVEKETFGLKPMNCPGHCLMFKARERSYRELPWRVA 433

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+  +    + D         +   ++I+ +  FL         E
Sbjct: 434 DFGVIHRNEFSGALSGLTRVRRFQQDDAH--IFCTQDQIEQEIENIFDFLKFMYGVFGFE 491

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
               +      EK   EL       +K     N+   +  +  G   + G   + ++   
Sbjct: 492 FKMELSTRP--EKYVGELETWDAAEKKLENALNKWGGAWELNPGDGAFYGPKIDIMISDA 549

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT-------GFSIGISRLIVALKSLES 367
           +    Q   +        R++        +               +G    + A+ +   
Sbjct: 550 LRRWHQCATIQLDFQLPQRFELEFKAKDTEESENYERPVMIHRAILGSVERMTAILTEHF 609

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS---KNF--GNQLK 422
           +      + P  I  +          Q     +  AG  A++ L  +   K    G  +K
Sbjct: 610 AGKWPFWLSPRQILVVPVGVKYQEYAQQVRDKMHNAGFYADVDLTGNTLQKKVRTGQLMK 669

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           Y          I G  E +   + I++    ++              +    T+ +  ++
Sbjct: 670 Y------NFIFIVGETEMNENSVNIRNRDVMEQ--------------QGKNATVNVDIVL 709

Query: 483 STVKKILQENKEE 495
             ++K+  E + +
Sbjct: 710 EQLQKLKAEKRLD 722


>gi|314966850|gb|EFT10949.1| glycyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314981192|gb|EFT25286.1| glycyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315091764|gb|EFT63740.1| glycyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315093229|gb|EFT65205.1| glycyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|327327676|gb|EGE69452.1| glycine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 506

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +SD   K +     LR      +     ++  G + +  D    P  I      
Sbjct: 415 VLPLSRNSDLSPKARDLAARLREH-WNVDFD--DAQAIGKRYRRQDEIGTPFCITVDFDS 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++     +    I   E +   R
Sbjct: 472 LEDDAVTVRERDTMAQQRVSIDKVEEYLGGR 502


>gi|293376342|ref|ZP_06622579.1| glycine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292645031|gb|EFF63104.1| glycine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 457

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/233 (7%), Positives = 47/233 (20%), Gaps = 13/233 (5%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F        +  L    +     E    EL         +G +    +           
Sbjct: 235 EFWKEYCWNWLVSLGMNPEHIRQREHSPEELSHY-----SNGTSDIEYRFPFGWGELWGV 289

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                ++       M E      +       +Y              T   +  +     
Sbjct: 290 ANRTDFDLKAH---MKESGANFEYQDPTTNEKYVPYCIEPSVGADRVTLAFLVDAYAEET 346

Query: 362 LK--SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           L+             + P  +  +        +       L        +    +   G 
Sbjct: 347 LENGETREVLKFHPALAPYKVAVLPLVKKLNEQALEVFADLSKH---MMVDYDEAGTIGK 403

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + +  D    P  +           + ++     ++    I     +  +++ 
Sbjct: 404 RYRRQDAIGTPFCVTFDYDSLEDKKVTVRHRDTMEQERVAIDELVEYITSKIQ 456


>gi|148244740|ref|YP_001219434.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166225515|sp|A5CWF9|SYT_VESOH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146326567|dbj|BAF61710.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 636

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 4/119 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   +   +   +R I+ + G+  + TP L       K     D+ 
Sbjct: 253 IQEETP-GMVFWHAKGWILYQLVEQYMRGIFRDNGYQEVHTPQLIDKSLWEKS-GHWDKF 310

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHGPGR 124
              +F+      +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 311 GDVMFT-TTSGDRDYAVKPMNCPAHIQIYNQGLKSYRNLPLRLAEFGSCHRNEPSGTLH 368



 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/236 (10%), Positives = 62/236 (26%), Gaps = 8/236 (3%)

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
               D+   F     +  E    +    ++       ++   +        G +E+   S
Sbjct: 375 NFVQDDGHIFCTPEQIQDEVSTFIDLTFNVYKYFGFEKINIKLSTRPKKRVGSDEVWDKS 434

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGR 333
           E+      N+  I        G  Y     +          +              G   
Sbjct: 435 EIALVEALNAKNIVWELQEGEGAFYGPKIEFILKDCLDRQWQCGTLQVDFSMPKRLGAQF 494

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    +     +           L + ++  E +         +    ++         
Sbjct: 495 IDENSVKKTPVILHRAIMGSLERFLGILIEHYEGAYPCWLSP--IQAVIINISEKHAKFI 552

Query: 394 QMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               + L+  G+R    L + K +F   ++    +  P  ++ G  E  +G + ++
Sbjct: 553 VDIVKKLKKQGLRVISDLRNEKVSFK--IREHSLQRYPYILVVGDREMEKGQVSVR 606


>gi|328462021|gb|EGF34202.1| ATP phosphoribosyltransferase regulatory subunit [Lactobacillus
          rhamnosus MTCC 5462]
          Length = 51

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 11 LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSL 56
          LP G  D        +  ++  + + +   G++ ++TPLLEY D  
Sbjct: 6  LPVGTRDEFGPRAIRKENLIQMMSHRFIASGYERVKTPLLEYRDVF 51


>gi|299535815|ref|ZP_07049136.1| glycyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298729015|gb|EFI69569.1| glycyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 461

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/235 (8%), Positives = 57/235 (24%), Gaps = 10/235 (4%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       + + + +       + +           
Sbjct: 225 LEFFCKPGEDLEWHAYWKEFCKNWLLNLGMKEDSMRLRDHEDDELSHYSNATTDIEFKFP 284

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           + +    +      +       +  V      ++ A   ++     
Sbjct: 285 FGWGELWGVADRTDYDLKQHMEHSGEDFTYIDPVSNERYVPYCIEPSLGADRVTLAFLCD 344

Query: 359 IVALKSLESSTNN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + LE             + P     +        +       LR A    +     
Sbjct: 345 AYDEEELEGDDKRTVLRFHPALAPFKAAVLPLSKKLSDEATDVWAELRKA-FPVDFD--E 401

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           S++ G + +  D    P  I      +  G + ++      ++   I   +++ E
Sbjct: 402 SQSIGKRYRRQDEIGTPFCITYDFDSKEDGQVTVRHRDSMTQVRMPIAEVKAYIE 456


>gi|311114395|ref|YP_003985616.1| glycine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310945889|gb|ADP38593.1| glycine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 506

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 29/98 (29%), Gaps = 2/98 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  +  Q     LR       +    S   G + +  D    PL +      
Sbjct: 370 VLPLSKKPELQAVAQDLASDLRQHDW--VIDYDESGAIGRRYRREDEIGTPLCVTVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
                + I++    ++    +     +  +R+ +  + 
Sbjct: 428 LEDHAVTIRERDTMQQERVSLDKVADYVASRINEKRVK 465


>gi|241948445|ref|XP_002416945.1| threonyl-trna synthetase, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223640283|emb|CAX44533.1| threonyl-trna synthetase, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 455

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 52/220 (23%), Gaps = 20/220 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++  ++N    YGF  + TPL+ +   L K     D     +F +  +D
Sbjct: 55  FLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLI-FKTKLWKKSGHWDNYKDDMFKVVGND 113

Query: 78  -----------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                           L+           A+                  R          
Sbjct: 114 ITKEEHTDNIEEHEYGLKPMNCPSHCMIFAK--------FDRSYQELPVRYSDFSSLHRN 165

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +                D        D ++       D      N   ++ I   +    
Sbjct: 166 EASGALSGLTRVRRFHQDDGHIFCSMDQIDGEIKNTLDLIKDTYNVFGINEIEFYLSTRP 225

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
           +DK    +      +   K  L            +  G F
Sbjct: 226 EDKFIGNIDTWDIAELQLKNVLNATAGEGNWSIREGDGAF 265



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 37/390 (9%), Positives = 94/390 (24%), Gaps = 22/390 (5%)

Query: 86  DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV---DNVGSSAET 142
           D T+P + +   +   I+     +      +           F         +  +  + 
Sbjct: 46  DPTSPGSIFFLPHGTRILNKLIQFMKNQQTKYGFQEVVTPLIFKTKLWKKSGHWDNYKDD 105

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
               +   +        I+ ++Y +   N      I  K      +              
Sbjct: 106 MFKVVGNDITKEEHTDNIEEHEYGLKPMNCPSHCMIFAKFDRSYQELPVRYSDFSSLHRN 165

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
                L G+   +     D+   F     +  E  + +           ++E+   +   
Sbjct: 166 EASGALSGLTR-VRRFHQDDGHIFCSMDQIDGEIKNTLDLIKDTYNVFGINEIEFYLSTR 224

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
              +   N        ++     +      +  +R  +         +L     N+K + 
Sbjct: 225 PEDKFIGNIDTWDIAELQLKNVLNATAGEGNWSIREGDGAFYGPKIDVLLKDAFNKKHQV 284

Query: 323 VVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
                          +Y G   +   Q +       G      A+            + P
Sbjct: 285 GTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFGSLERFFAILLDHYQGKWPFWINP 344

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAE----------MFLGSSKN---FGNQLKYA 424
                +  +   +   +   + L    I  +            +   K     G + K A
Sbjct: 345 RQALIVPINESHVPVAEELQKKLSGDIISCDKSIAPLTGFNFHVDVDKRGETVGARTKDA 404

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            ++     I+ G  + + G   ++     K
Sbjct: 405 IQKGYSYLIMIGDKDIANGTFAVRSRDDRK 434


>gi|218245600|ref|YP_002370971.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257058646|ref|YP_003136534.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218166078|gb|ACK64815.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256588812|gb|ACU99698.1| threonyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 607

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 3/108 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++                +  +      L   +     ++  GIR
Sbjct: 480 HRAPFGSLERLIGILIEEYAGDFPLWLSPIQARLLPVS--DLQLDYAKEVASKMQQLGIR 537

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           AE    S +  G  ++ A+++  P+  + G  E     L I+  A G+
Sbjct: 538 AE-ADTSGERLGKMVRNAEKQKIPVMGVIGAKEVESNSLSIRTRASGE 584


>gi|45190711|ref|NP_984965.1| AER105Wp [Ashbya gossypii ATCC 10895]
 gi|44983690|gb|AAS52789.1| AER105Wp [Ashbya gossypii ATCC 10895]
          Length = 457

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/457 (10%), Positives = 113/457 (24%), Gaps = 91/457 (19%)

Query: 14  GFADCPTKEIRIRNRILDSIR-NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G         ++ N+++  ++      +GF  + TPL+       K L +          
Sbjct: 55  GSTFFLPNGTKVFNKLIQFMKLQQQNKFGFQEVITPLI-----YRKSLWE---------- 99

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                G W                EN+   +F                           +
Sbjct: 100 ---QSGHW----------------ENYKDDMFRVE------------------GNDCAKE 122

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          M      +   + ++ +D+     +R    G L  +          
Sbjct: 123 EYGLKPMNCPGHCVMFKRFDRSYTELPLRFSDFSP--LHRNEASGALSGLTR-------- 172

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRT--DNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            +      D       + V+  + +     D           TS++ ++    LS   EK
Sbjct: 173 -VRKFHQDDGHIFCTPEQVEGEIEKCLQLVDLCYGSVLPLGETSDRAELYTMCLSTRPEK 231

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
            + EL          +   +       +    G                +Y+     +  
Sbjct: 232 YVGELDVWNHAESVLKSILDNSGKQWSINEGDGAFYGPKVDIKVKDHTGKYHQVATIQLD 291

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
              P   +               Y   +   +        F       ++   +  +   
Sbjct: 292 FQLPERFD------MRYKDADNTYKRPIMIHRAVFGSVERFMA-----LLLDSNKGNWPF 340

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQML--RTA-----------GIRAEMFLGSSKNF 417
            +     +++     + + +   +     L  R                AE+ L   ++ 
Sbjct: 341 WLNPHQCMVLPVSASNGEMVQAAKALVDKLCGRDTSSTKPVELNSFHFNAEIDL-RDESV 399

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           G +L+ A  R     ++ G  E ++  + ++     K
Sbjct: 400 GYRLRDAISRKYSYIVLIGARELAQNKVAVRSRDSSK 436


>gi|119026156|ref|YP_910001.1| glycyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118765740|dbj|BAF39919.1| glycyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 491

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 31/102 (30%), Gaps = 2/102 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    D  S  Q     LR       +    +   G + +  D    PL +      
Sbjct: 370 VLPLSKKPDLQSVAQKLAADLRQNEW--MIDYDEAGAIGRRYRREDEIGTPLCVTVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                + I++    ++    +     +   R+ +  + + ++
Sbjct: 428 LDDQAVTIRERDTMQQERVSLDKVADYIAERIGEKRVSVPQM 469


>gi|171185819|ref|YP_001794738.1| prolyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|259511627|sp|B1Y963|SYP_THENV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|170935031|gb|ACB40292.1| prolyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 487

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        +++R  + + IR +++  G + +  P+    +  GK         K V
Sbjct: 37  PVKGAYVWRPYGMKLRRNVEELIRRVHDETGHEEVLFPVFIPYEFFGKESQHIRGFEKEV 96

Query: 71  F--SLQDDDGQWISLRY 85
           F  S   + G+ + LR 
Sbjct: 97  FWVSKGGEGGERLVLRP 113



 Score = 41.0 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 27/254 (10%), Positives = 74/254 (29%), Gaps = 27/254 (10%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             E + +       E+   E V I + +      +  I       +         ++ +L
Sbjct: 163 FKEAHTVHVDREDAERQVREAVEIYKRIFDEMCLAYMINKRPDWDKFAGAEYTIAFDTVL 222

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLE 366
                 +       G+          +     + +  T       R I A+         
Sbjct: 223 PDGRTLQIGTAHYLGTNFTRVFEVTYLDADGTRKLAHTTSYGISERSIAAMLITHGDDGG 282

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++         + +  + +  + +             L+ AG+R  +     K  G +  
Sbjct: 283 TTLPPKLAPIQIAVVPIYYSDEEMPLVMKFVEEVVAALKGAGLRLHVDDRRDKTPGWKFY 342

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           Y + +  PL +  G  +  +  + +                   R   + +  + + ELV
Sbjct: 343 YWELKGVPLRLEVGKRDVEKRQVVV------------------TRRDTLEKYAVALGELV 384

Query: 483 STVKKILQENKEEI 496
             V+++++  ++ +
Sbjct: 385 DAVRELMKAVEDNL 398


>gi|138897004|ref|YP_001127457.1| glycyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166227934|sp|A4ITQ8|SYG_GEOTN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|134268517|gb|ABO68712.1| Glycyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 466

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/239 (7%), Positives = 62/239 (25%), Gaps = 10/239 (4%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  K      +  K  +       E + + +  ++   + +           
Sbjct: 230 LEFFCKPGEELKWFDYWKQFCKEWLLSLGMNEEHIRLRDHTKEELSHYSNATTDIEYQFP 289

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   + +    +              +  +      ++ A   ++     
Sbjct: 290 FGWGELWGIASRTDYDLKQHMEHSGEDFHYLDQETNERYIPYCIEPSLGADRVTLAFMID 349

Query: 359 IVALKSLES-----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + LE        +    + P     +          +   + L        +    
Sbjct: 350 AYDEEELEDGTTRTVMHLHPALAPYKAAVLPLSKKLGDGARRIYEELAKH---FMVDYDE 406

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + + G + +  D    P  I         G + ++D    +++   I   +++ + ++A
Sbjct: 407 TGSIGKRYRRQDEIGTPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGELKAFLDKKIA 465


>gi|327356150|gb|EGE85007.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 770

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/475 (10%), Positives = 124/475 (26%), Gaps = 57/475 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R+ Y   G+  +++P +   D  + +           +F 
Sbjct: 350 GCPFLLPNGTKIFNALQKLLRSEYLKRGYQEVQSPNM--YDVGIWRQSGHWQHYKDDMFK 407

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+             +        R+YR  P+   +     R        
Sbjct: 408 L-DIEKRTWALKPMNCPG-------HAIMFGHKERSYRELPIRMADFGVLHRNEASGALH 459

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                   +  D  +       ++ +    +              +  K+    +  + +
Sbjct: 460 GLTRVRKFQQDDTHIFCTEDQIMKEIDGLFDFLRAIYGLFGFSFKL--KLSTRPEKYMGK 517

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                 A D+L          L      D   +   GA    +    +   L  + + + 
Sbjct: 518 IETWNYAEDQLRA-------ALTKFKGNDWEVEEGDGAFYGPKIDITIQDALKREFQCAT 570

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L   +      E    E    ++   K   N +                         
Sbjct: 571 IQLDYQMPVNFKLEYMTGETGAKAKPTEKPAENPDE------------------------ 606

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL-ESSTNN 371
                +  KP    +       +    R +   +             + ++         
Sbjct: 607 -KPAGDAAKPDAPPT----NSDEPGPGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFW 661

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +     +++  M   +D + + Q     L+   +  ++ +  +     +++         
Sbjct: 662 LSPRQILIVPVMPAINDYVEELQQI---LKGDKLNVDIDISGN-TMQKKIRTGQIAQYNF 717

Query: 432 AIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREARVAQITIPISELVSTV 485
             + G  E+S   + I++      +    +   E  R    A        LV+ +
Sbjct: 718 IFVVGAQEKSTRTVNIRNRDDPSSQAKGSLVPLEEARVKLRALR--KERRLVNEL 770


>gi|308234686|ref|ZP_07665423.1| glycyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
          Length = 506

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 29/98 (29%), Gaps = 2/98 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  +  Q     LR       +    S   G + +  D    PL +      
Sbjct: 370 VLPLSKKPELQAVAQDLAADLRQHDW--VIDYDESGAIGRRYRREDEIGTPLCVTVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
                + I++    ++    +     +  +R+ +  + 
Sbjct: 428 LEDHAVTIRERDTMQQERVSLDKVADYVASRINEKRVK 465


>gi|193216931|ref|YP_002000173.1| threonyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002254|gb|ACF07469.1| threonyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 579

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL-EYSDSLGKFLPDEDRPNKGVFS 72
           GF       ++I N I D +  +   +GF  + TP   E    L +     D   + +F+
Sbjct: 200 GFPIWLEDGMKIHNAIRDYVLKLDRKFGFKEVLTPHFGEKK--LYEISGHWDHYQEDMFT 257

Query: 73  LQDDDGQWISLRYDLTAP--LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
               D + +  R  +T P  +  Y          P R      ++R EK G
Sbjct: 258 PIKMDNETLVARP-MTCPHHIVLYNMTRRSYRDLPIRYSEQSRLYRYEKSG 307



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/356 (9%), Positives = 89/356 (25%), Gaps = 16/356 (4%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
                 +              E   P    + +     +     E     + M     + 
Sbjct: 209 MKIHNAIRDYVLKLDRKFGFKEVLTPHFGEKKLYEISGHWDHYQEDMFTPIKMDNETLVA 268

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQG----VK 212
                 +   +    R+    +  +          E+   L  ++++    L      V+
Sbjct: 269 RPMTCPHHIVLYNMTRRSYRDLPIRYSEQSRLYRYEKSGALSGLERVRSMDLTEGHVFVR 328

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +    +  +  + A    +     VS    D   S+    +         +   +L
Sbjct: 329 KDQIKAEFKHLYNMIQKALSDFDIQVDHVSLSLRDPNNSV----KFFNDDKMWNQAEADL 384

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
             + + ++        I  ++     +++    V   I+    +           +    
Sbjct: 385 KEVLKELKIE--YKEFIGEAAFYGPKIDFQVKTVLNKIITMSTLQLDFLLPARFEM---K 439

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
             D          +           + + L+  +           V I  +  + +    
Sbjct: 440 YVDDKEEFQTPVLIHRGLIGTYERFIAILLEQTKGVLPYWLSPRQVTILPIVDEVN--DY 497

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   +     GI A + L S +    +++ A        I+ G  E +   L ++
Sbjct: 498 CQKLYEEFIDLGINANVDLRSER-INKKIREAQLLKTKFIIVIGKNEIANNTLAVR 552


>gi|15616855|ref|NP_240068.1| prolyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11134948|sp|P57333|SYP_BUCAI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|25293219|pir||B84958 proline-tRNA ligase (EC 6.1.1.15) [imported] - Buchnera sp.
           (strain APS)
 gi|10038919|dbj|BAB12954.1| prolyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 572

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G        +R+  +I + I    E      I  P+++  + L K     +  
Sbjct: 31  MIRKTSSGLYVWLPTGMRVLKKIKNIITTEMEKINALEILMPIIQP-EYLWKESRRLNLY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
            + +    D       L  
Sbjct: 90  GEELLRFLDRRKNQFILGP 108


>gi|315425492|dbj|BAJ47154.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315427484|dbj|BAJ49088.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315427502|dbj|BAJ49105.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 608

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/329 (12%), Positives = 87/329 (26%), Gaps = 22/329 (6%)

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
             R  +             E       M  A   +   + RN      +    +  + + 
Sbjct: 255 ESRPIREHASLFGQRMYKVEVDGRPYVMRYAACFQQFALARNWVISYRSLPFGMFEVADS 314

Query: 182 IGLHGDDKLNE--RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             L    +L    RL  +   D           L + E   D      +           
Sbjct: 315 YRLEQRGELVLGFRLRKMSMPDLHVFCRDIPEALQIVEKIHDKIYSEIEKLGRD------ 368

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
             S  ++   K   E     +  +  EK    L    E        +    I     R  
Sbjct: 369 YYSLYNLTSRKFFEENRGFFQKLLKREKKPVLLSFYPENSSYYWVLNIEYHIIDKFGRPR 428

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           E  T       +   V N ++  + +    G  +Y  ++       V    +++  + L 
Sbjct: 429 EIGT-------VQIDVGNAERFGITYVEKDGEKKYPVILHSALIGTVERYLYAVVDTALS 481

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                 ++       + P  +  +  +     +     + +   GIR ++     +    
Sbjct: 482 ------KTPPTLPTWLCPTQLRILPLNEKYNKRAVQLAEKITKYGIRVDVD-DRPETLAK 534

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           ++  A+    P     G  E  +G L I+
Sbjct: 535 KVYEAETSWIPYVATLGPKEAKKGTLAIR 563


>gi|116748707|ref|YP_845394.1| prolyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|152112959|sp|A0LHQ7|SYP_SYNFM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116697771|gb|ABK16959.1| prolyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 581

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 23/166 (13%)

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIK---EMGPVLITTMDH 385
                Y       +   +   G  +         +  +    +         V++ ++  
Sbjct: 423 SMDATYLDAAGNQQRVVMGCYGIGVERLMASAVEQWHDEGGMSFPYSIAPFQVILCSLGR 482

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
             + L   Q   + L  A     ++    ++ G +LK AD    P+ ++       +G +
Sbjct: 483 KPEILEAAQALYERL-GAHYDT-IYDDRDESPGVKLKDADLLGVPIRVVVSQKLLQKGEV 540

Query: 446 QIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +IK    G                    I  P  EL+ T+++I+ +
Sbjct: 541 EIKVRRTG------------------VVIVCPRDELLETLERIVAD 568



 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 24/210 (11%), Positives = 57/210 (27%), Gaps = 14/210 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R          +  P+L  ++   K     D   + +F +
Sbjct: 38  GVYSLLPLGHRVAEKIKAILREELNAIEGLEVTMPVLNPAELWKKSSRYYDI-GQELFRI 96

Query: 74  QDDDGQWISL---RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D   +   L     ++   +AR    ++  +      Y+I    R+E        +  +
Sbjct: 97  KDRKDREFVLAMTHEEVITDIARQFLRSYRHLP--VMLYQIQTKIRDEARPRAGLLRVRE 154

Query: 131 CDVDNVGSSAET------ADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL--DGILEKI 182
             +++  S              +           G+                    + + 
Sbjct: 155 FFMNDAYSFHPDFADLDAYYPRIFNAYLRIFTRCGLTTVPIEADSGIMGGTGSHEFMLES 214

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
               D  +       RA  +  +  +  VK
Sbjct: 215 PNGEDRFVVCTQCDYRANTEKAQGLIPPVK 244


>gi|315924009|ref|ZP_07920236.1| glycyl-tRNA synthetase beta subunit [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315622635|gb|EFV02589.1| glycyl-tRNA synthetase beta subunit [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 461

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/197 (9%), Positives = 55/197 (27%), Gaps = 24/197 (12%)

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
               +                ++      V  +              RY    +  K   
Sbjct: 278 DVEYQFPFGWGELWGIADRTDFDLTQHENVSGK------------DLRYQDPATNEKYIP 325

Query: 346 VPATGF----SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
                      + ++ L  AL+  +    + + +  +      + +  L   +  +   R
Sbjct: 326 YVIEPSLGADRMFLAFLCDALEHEKLDGGDTRNVMKIHPFLSAYKAAVLPLSKKLSDKAR 385

Query: 402 TAGIRAE------MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
              + A+      +    + + G + +  D    PL +           + I+D    ++
Sbjct: 386 E--VYADLAKYFNVDYDETGSIGKRYRREDEIGTPLCVTIDFDTLEDNAVTIRDRDTMEQ 443

Query: 456 LSREIKNNESWREARVA 472
           +   I   +++ E ++A
Sbjct: 444 IRLPIGQVKAYIEEKIA 460


>gi|240138908|ref|YP_002963383.1| threonine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240008880|gb|ACS40106.1| threonine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 675

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 83/272 (30%), Gaps = 10/272 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNELVVIS 276
           D++  F     L +E + I    LS   +    ++   +          +  ++    + 
Sbjct: 387 DDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILVKLSTRPEKRVGSDALWDHAEAVM 446

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
             V       +  +I + +  G   + G  +E +L   +  + Q            R+D 
Sbjct: 447 TQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRDAIGRDWQCGTTQVDFNLPERFDA 506

Query: 337 LVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                  Q  P           + R    L    +    +  + PV +      SD+   
Sbjct: 507 SYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGHFPLW-LAPVQVVVATITSDADPY 565

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   ++L  AG+R E  L  ++    +++       P+ +  G  E     + ++ +  
Sbjct: 566 AREVVRVLERAGLRVEADL-RNEKINYKVREHSLAKVPVLLALGRREAEERTVSVRRMGS 624

Query: 453 GKELSREIKNNESWREARVAQITIPISELVST 484
            K  +  +    +             ++  S 
Sbjct: 625 QKTTTMTLDAALAAFIEEATSPDRRRADAASE 656


>gi|70945484|ref|XP_742556.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56521607|emb|CAH81770.1| hypothetical protein PC000808.04.0 [Plasmodium chabaudi chabaudi]
          Length = 287

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 32/103 (31%), Gaps = 5/103 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    S   +       + ++ ++ +     +    +L    I  ++   SS + G   K
Sbjct: 157 ERHYLSLPYVISPIKCSVLSISNNKEFYPYIKQIQTILNENNISCKLD-NSSVSIGK--K 213

Query: 423 YA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           YA  D    P A+           + ++D     ++       
Sbjct: 214 YARTDEIGIPFAVTIDFQTLKDKTVTLRDRDSMLQIRVSTSEV 256


>gi|330840876|ref|XP_003292434.1| hypothetical protein DICPUDRAFT_157146 [Dictyostelium purpureum]
 gi|325077326|gb|EGC31046.1| hypothetical protein DICPUDRAFT_157146 [Dictyostelium purpureum]
          Length = 686

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 37/104 (35%), Gaps = 6/104 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGT 437
           I  + +    +      +++L+ AGI  ++    +   G   KYA  D    P  I    
Sbjct: 575 ILPLTNSEKLVPFVAKISKLLKEAGISTKLDDTGNA-IGR--KYARTDEIGIPFGITIDF 631

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                  + +++    K++   I +     +      T+  S++
Sbjct: 632 TTVEDETVTLRERDTTKQIRIPITDLALTLKKLCD-NTVSWSDV 674


>gi|325989371|ref|YP_004249070.1| prolyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574456|emb|CBZ40106.1| Prolyl-tRNA synthetase [Mycoplasma suis]
          Length = 463

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 67/236 (28%), Gaps = 10/236 (4%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI----SSTIVRGLEYYTGCVYEA 309
              EL       +     L  I E+ +K       I+      + + R          E 
Sbjct: 146 YWQELHSLHENQKDLDFHLEKIHEIYKKLLRELLCIEYITGEKTILERFPGAQKTLTNEC 205

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           IL      +        +                +  P    +   +RLI AL  +   +
Sbjct: 206 ILPDGQSLQLTTTHDLSNFFSKLMDIKYWGANDIEMTPLQLSAGSSTRLIGALVEMHKDS 265

Query: 370 ---NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYA 424
                   +    I  +    +   +   Y   +R      R  +   S  +FG ++   
Sbjct: 266 VGVILPWNLSKENIAILLLGENRDEETISYISSIREKLCNYRLHID-DSYSSFGKKINKV 324

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           +R   P+++I G  E     + IK      +   ++ N E+       +    + E
Sbjct: 325 ERLGIPVSLIIGQQEIKNKKITIKSRLSESKYECDLSNLENEISRFSKEYDQKLRE 380


>gi|19112749|ref|NP_595957.1| mitochondrial proline-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74676105|sp|O74765|SYPM_SCHPO RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags:
           Precursor
 gi|3687477|emb|CAA21147.1| mitochondrial proline-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 425

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++  +P G        +R++N+I D +     + G   I    L   +   K      + 
Sbjct: 37  IQPSMP-GIFQYLPLGLRVQNKICDLLHISMRSLGASAISLAHLSSKEIWEKS-GRWQKT 94

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +F L D + + + L  
Sbjct: 95  GSELFRLHDRNDREMCLAP 113



 Score = 40.2 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 25/66 (37%)

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              +    ++ FG +++ A+    P  I+ G+  +  G+ +I   + G+    +  +   
Sbjct: 359 NVLLEDRQNRAFGYKMRDAELIGYPFVIVVGSRFQEEGICEIIVRSSGERYKLDKDSLHQ 418

Query: 466 WREARV 471
                 
Sbjct: 419 VLLGNF 424


>gi|302871793|ref|YP_003840429.1| glycyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574652|gb|ADL42443.1| glycyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 434

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 31/106 (29%), Gaps = 3/106 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +         +  +    + + K +     L     +  +    S + G + +  D 
Sbjct: 329 LHLHPAIAPVKAAVFPLLKKEELVKKAREIYNEL---KYKWIVQYDESGSIGKRYRRQDE 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P  I           + I+D    +++   IK    + E R+ 
Sbjct: 386 IGTPFGITVDYQTLEDETVTIRDRDTMEQVRVHIKEIIPYLEERIE 431


>gi|302682704|ref|XP_003031033.1| hypothetical protein SCHCODRAFT_77271 [Schizophyllum commune H4-8]
 gi|300104725|gb|EFI96130.1| hypothetical protein SCHCODRAFT_77271 [Schizophyllum commune H4-8]
          Length = 728

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/357 (9%), Positives = 99/357 (27%), Gaps = 21/357 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           N+ ++     +       D +  + I+++++ +   N      I +       +      
Sbjct: 377 NMYNAKLWETSGHWENYKDDMFTLDIEKDNWALKPMNCPGHCLIFDSRDRSYRELPIRMA 436

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+   +     D++  F   + + +E   +      +        
Sbjct: 437 EFGIIHRNEASGALSGLTR-VRRFVQDDTHIFCMPSQVEAEMAGLFDFMQHVYGIFGFEF 495

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             EL                  + ++++            +  G   + G   +  +   
Sbjct: 496 HLELSTRPEKYLGEVETWNAAEDQLKQA--LEKYYPGKWELNPGDGAFYGPKIDITIRDA 553

Query: 315 VMNEKQKPVVFGSVGGGGRYD-GLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNN 371
           +    Q   +        R++    S  +    P       +G     VA+ +   +   
Sbjct: 554 LKRAYQCATIQLDFQLPQRFNLKYRSNNEEVQRPIIIHRAILGSIERFVAIATEHFAGKW 613

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + P  +  +   +          + L  A + AE+   S      +++  +      
Sbjct: 614 PFWLSPRQVLVIPVAAPYKEYASEVAETLSKANLYAEVD-NSDNTLQKKIRNGEIAQYNF 672

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            ++ G  E     + +++                    +    TIP++++V  + K+
Sbjct: 673 ILVVGETELESKSVNVRNRDD--------------VGTKARSATIPLADIVDKLVKL 715



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +++ +R+ Y   G+  + +P + Y+  L +     +     +F+L  + 
Sbjct: 346 FLPHGTRIYNTLIELMRSEYFKRGYQEVISPNM-YNAKLWETSGHWENYKDDMFTLDIEK 404

Query: 78  GQWISLRYDLTAP 90
             W +L+      
Sbjct: 405 DNW-ALKPMNCPG 416


>gi|327393701|dbj|BAK11123.1| Threonyl-tRNA synthetase ThrS [Pantoea ananatis AJ13355]
          Length = 642

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 90/339 (26%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     L +E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQLRTEVNSCIRMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E    +  N N I+       G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDETWDRAEEDLAAALNENNIEFEYQPGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     +  P       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPKRLDATYVGENNDRQTPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P+    M+         +  T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 SWLAPMQAVVMNITDGQAEYVETLTRKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++       +  +
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSMDVDVFVEKLQQEI 632



 Score = 37.9 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 55/198 (27%), Gaps = 13/198 (6%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRF 125
              +F+    + +   ++        +   +   +    P R    G   RNE  G    
Sbjct: 314 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH- 371

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                     +     T D        D L             + +    + I+ K+   
Sbjct: 372 --------GLMRVRGFTQDDAHIFCTEDQLRTEVNSCIRMVYDMYSTFGFEKIVVKLSTR 423

Query: 186 GDDKLNERLIVLRAIDKL 203
            + ++       RA + L
Sbjct: 424 PEKRIGSDETWDRAEEDL 441


>gi|313619135|gb|EFR90924.1| prolyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 145

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 41  WDKQISPFDLHLIPVNMKSEEQVAFAESLYDSLQKAGFSVLIDDRTERA-GVKFADADLI 99

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 100 GLPIRITVGKK-AAEGIVEVKIRKTGEMIEVRQDEL 134


>gi|254456038|ref|ZP_05069467.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083040|gb|EDZ60466.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 638

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/244 (11%), Positives = 80/244 (32%), Gaps = 6/244 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +TSE +++    L I  +     +            G +E+   +E   
Sbjct: 383 DDAHIFCSEDQITSECLEVTNLILDIYKDLGFENVILKYADRPEVRVGDDEIWDKAEASL 442

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                +++++ S     G  Y     +   +AI         Q  +           D  
Sbjct: 443 LEAVKASKLEYSINKGEGAFYGPKIEFVLRDAIGRDWQCGTLQVDLNLPGRLDASYVDKD 502

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            ++     +    F      + + +++              ++  +  + +        +
Sbjct: 503 GTKKVPVMLHRALFGSLERFIGILIENYAGKFPFWISPLQTMVIPISEEFN--DYAVEVS 560

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           + ++  GI + + L ++ N   +++       P+ +I G  E     + I+ L   K+ +
Sbjct: 561 KKIKKVGISSAVDLKNN-NLNYKIRDHSLAKIPVLLICGKKEVDSNSVTIRRLDSNKQEN 619

Query: 458 REIK 461
            + +
Sbjct: 620 MDTE 623



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 74/258 (28%), Gaps = 15/258 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKGVFS 72
           G      K   +  ++++ +R+  +  G+  + TP  E  D  L +     ++  + +++
Sbjct: 262 GSVFWHEKGWALFQKLINYMRSRQDAAGYREVNTP--EILDRQLWEKSGHWEKYGENMYT 319

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
            +  D +  +++             +        ++YR  P+   E     R+       
Sbjct: 320 SETPDEKVFAIKPMNCPG-------HIQVFNQGLKSYRDLPIRIAEFGKVHRYEPSGALH 372

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                 +    DA +               N       +    + IL+          ++
Sbjct: 373 GLLRVRAFTQDDAHIFCSEDQITSECLEVTNLILDIYKDLGFENVILKYADRPEVRVGDD 432

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
            +      DK +   L+ VK    E   +       G  +     D +         +  
Sbjct: 433 EI-----WDKAEASLLEAVKASKLEYSINKGEGAFYGPKIEFVLRDAIGRDWQCGTLQVD 487

Query: 253 HELYELVKGTIAGEKGFN 270
             L   +  +   + G  
Sbjct: 488 LNLPGRLDASYVDKDGTK 505


>gi|217976989|ref|YP_002361136.1| tRNA synthetase class II (G H P and S) [Methylocella silvestris
           BL2]
 gi|217502365|gb|ACK49774.1| tRNA synthetase class II (G H P and S) [Methylocella silvestris
           BL2]
          Length = 371

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 4/98 (4%)

Query: 30  LDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTA 89
            D++       G+   E  +L+ +        D       ++   D  G    LR + T 
Sbjct: 8   FDAVALHLARAGYQRCEPAILQPASIFFDSGED---LRGQLYLTSDLSGADYCLRPEYTI 64

Query: 90  PLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
           P++++   +             GPVFR   + P  F Q
Sbjct: 65  PVSQHYLASGLAGESA-AYSYCGPVFRYAPNEPSEFIQ 101


>gi|156552955|ref|XP_001603180.1| PREDICTED: similar to threonyl-tRNA synthetase [Nasonia
           vitripennis]
          Length = 859

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 3/105 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N +++ IR  Y+  GF  + TP + Y+  L +        ++ +FS  D +
Sbjct: 482 FQPRGAHIYNTLVEFIRGEYKKRGFQEVVTPNI-YNSKLWQTSGHWQHYSENMFSF-DVE 539

Query: 78  GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            +  +L+          +   N      P R    G + RNE  G
Sbjct: 540 KETFALKPMNCPGHCMIFDVRNRSWRELPLRMADFGVLHRNELSG 584



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 9/92 (9%), Positives = 29/92 (31%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +   +      + P  +  +                +  AG   E+       
Sbjct: 734 ERMIAILTESYAGKWPFWLSPRQVMVIPVGPSLDEYATQTRDKIHAAGFMTEVDTDHGDT 793

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +++ A        ++ G  E++ G + ++
Sbjct: 794 LNKKIRNAQLDQFNFILVVGEKEKAAGTVNVR 825


>gi|332809089|ref|XP_513427.3| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial [Pan
           troglodytes]
          Length = 475

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 47/153 (30%), Gaps = 15/153 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 90  LLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAE-LWQATNRWDLMGKELLRLRDRH 148

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 149 GKEYCLGPTHEEAITALIA---SQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFY 205

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D+   +A+   + +C         +G
Sbjct: 206 MKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLG 238


>gi|34303926|ref|NP_689481.2| probable prolyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|73919761|sp|Q7L3T8|SYPM_HUMAN RecName: Full=Probable prolyl-tRNA synthetase, mitochondrial;
           AltName: Full=Proline--tRNA ligase; Short=ProRS; Flags:
           Precursor
 gi|33873290|gb|AAH11758.2| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|39644604|gb|AAH07956.2| Prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|56204888|emb|CAI18996.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|119627074|gb|EAX06669.1| prolyl-tRNA synthetase (mitochondrial)(putative) [Homo sapiens]
 gi|158260381|dbj|BAF82368.1| unnamed protein product [Homo sapiens]
 gi|312152388|gb|ADQ32706.1| prolyl-tRNA synthetase 2, mitochondrial (putative) [synthetic
           construct]
          Length = 475

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 47/153 (30%), Gaps = 15/153 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 90  LLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAE-LWQATNRWDLMGKELLRLRDRH 148

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 149 GKEYCLGPTHEEAITALIA---SQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFY 205

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D+   +A+   + +C         +G
Sbjct: 206 MKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLG 238


>gi|5911945|emb|CAB55948.1| hypothetical protein [Homo sapiens]
          Length = 409

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 47/153 (30%), Gaps = 15/153 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 24  LLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAE-LWQATNRWDLMGKELLRLRDRH 82

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 83  GKEYCLGPTHEEAITALIA---SQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFY 139

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D+   +A+   + +C         +G
Sbjct: 140 MKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLG 172


>gi|10438145|dbj|BAB15178.1| unnamed protein product [Homo sapiens]
          Length = 402

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 47/153 (30%), Gaps = 15/153 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 17  LLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAE-LWQATNRWDLMGKELLRLRDRH 75

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 76  GKEYCLGPTHEEAITALIA---SQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFY 132

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D+   +A+   + +C         +G
Sbjct: 133 MKDMYTFDSSPEAAQQTYSLVCDAYCSLFNKLG 165


>gi|325972878|ref|YP_004249942.1| prolyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651480|gb|ADX97562.1| prolyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 463

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 67/236 (28%), Gaps = 10/236 (4%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI----SSTIVRGLEYYTGCVYEA 309
              EL       +     L  I E+ +K       I+      + + R          E 
Sbjct: 146 YWQELHSLHENQKDLDFHLEKIHEIYKKLLRELLCIEYITGEKTILERFPGAQKTLTNEC 205

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           IL      +        +                +  P    +   +RLI AL  +   +
Sbjct: 206 ILPDGQSLQLTTTHDLSNFFSKLMDIKYWGANDIEMTPLQLSAGSSTRLIGALVEMHKDS 265

Query: 370 ---NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAEMFLGSSKNFGNQLKYA 424
                   +    I  +    +   +   Y   +R      R  +   S  +FG ++   
Sbjct: 266 VGVILPWNLSKENIAILLLGENRDEETISYISSIREKLCNYRLHID-DSYSSFGKKINKV 324

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           +R   P+++I G  E     + IK      +   ++ N E+       +    + E
Sbjct: 325 ERLGIPVSLIIGQQEIKNKKITIKSRLSESKYECDLSNLENEISRFSKEYDQKLRE 380


>gi|315425261|dbj|BAJ46929.1| threonyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 593

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/329 (12%), Positives = 87/329 (26%), Gaps = 22/329 (6%)

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
             R  +             E       M  A   +   + RN      +    +  + + 
Sbjct: 240 ESRPIREHASLFGQRMYKVEVDGRPYVMRYAACFQQFALARNWVISYRSLPFGMFEVADS 299

Query: 182 IGLHGDDKLNE--RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239
             L    +L    RL  +   D           L + E   D      +           
Sbjct: 300 YRLEQRGELVLGFRLRKMSMPDLHVFCRDIPEALQIVEKIHDKIYSEIEKLGRD------ 353

Query: 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGL 299
             S  ++   K   E     +  +  EK    L    E        +    I     R  
Sbjct: 354 YYSLYNLTSRKFFEENRGFFQKLLKREKKPVLLSFYPENSSYYWVLNIEYHIIDKFGRPR 413

Query: 300 EYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
           E  T       +   V N ++  + +    G  +Y  ++       V    +++  + L 
Sbjct: 414 EIGT-------VQIDVGNAERFGITYVEKDGEKKYPVILHSALIGTVERYLYAVVDTALS 466

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                 ++       + P  +  +  +     +     + +   GIR ++     +    
Sbjct: 467 ------KTPPTLPTWLCPTQLRILPLNEKYNKRAVQLAEKITKYGIRVDVD-DRPETLAK 519

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           ++  A+    P     G  E  +G L I+
Sbjct: 520 KVYEAETSWIPYVATLGPKEAKKGTLAIR 548


>gi|313242883|emb|CBY39630.1| unnamed protein product [Oikopleura dioica]
          Length = 125

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 27/66 (40%)

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A+ +   +    N L+  + RN P  I+ G  E   G++ ++ +    E      +    
Sbjct: 59  AQTYYKPNPKLLNDLQSCESRNIPWGIVFGEREIEEGIVLLRSIISRDEEKVTRSDLVKV 118

Query: 467 REARVA 472
            + ++A
Sbjct: 119 LKEKLA 124


>gi|207344345|gb|EDZ71519.1| YIL078Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 689

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D +R  Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 307 WLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 365

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 366 -ETFGLKPMNCPG 377



 Score = 48.7 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 43/143 (30%), Gaps = 23/143 (16%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             + A+ +   +      + P  +  +          +     L  AG  A++ L  +  
Sbjct: 562 ERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYADVDLTGNTL 621

Query: 417 FGN----QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  Q+            I G  E +   + I++    ++              +  
Sbjct: 622 QKKVRNGQM-----LKYNFIFIVGEQEMNEKSVNIRNRDVMEQ--------------QGK 662

Query: 473 QITIPISELVSTVKKILQENKEE 495
             T+ + E++  ++ +  E + +
Sbjct: 663 NATVSVEEVLKQLRNLKDEKRGD 685


>gi|190406293|gb|EDV09560.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|259147177|emb|CAY80430.1| Ths1p [Saccharomyces cerevisiae EC1118]
 gi|323333154|gb|EGA74554.1| Ths1p [Saccharomyces cerevisiae AWRI796]
 gi|323354584|gb|EGA86420.1| Ths1p [Saccharomyces cerevisiae VL3]
          Length = 734

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D +R  Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 352 WLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 410

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 411 -ETFGLKPMNCPG 422



 Score = 48.7 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 43/143 (30%), Gaps = 23/143 (16%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             + A+ +   +      + P  +  +          +     L  AG  A++ L  +  
Sbjct: 607 ERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYADVDLTGNTL 666

Query: 417 FGN----QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  Q+            I G  E +   + I++    ++              +  
Sbjct: 667 QKKVRNGQM-----LKYNFIFIVGEQEMNEKSVNIRNRDVMEQ--------------QGK 707

Query: 473 QITIPISELVSTVKKILQENKEE 495
             T+ + E++  ++ +  E + +
Sbjct: 708 NATVSVEEVLKQLRNLKDEKRGD 730


>gi|172038860|ref|YP_001805361.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171700314|gb|ACB53295.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 608

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 42/131 (32%), Gaps = 3/131 (2%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           +R +   +    F      + + ++              V +  +      L   +    
Sbjct: 473 NRHRPVMIHRAPFGSLERLIGILIEEYAGDFPLWLAPTQVRLLPVS--DVQLDYVKDVAN 530

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            + + GIRAE    S +  G  ++  +++  P+  I G  E     L I+  A G+  + 
Sbjct: 531 KMLSLGIRAE-ADTSGERLGKMIRNGEKQKIPVMAIVGAKEVEANALSIRTRASGELGTM 589

Query: 459 EIKNNESWREA 469
            +         
Sbjct: 590 AVDEVIEKLND 600



 Score = 38.3 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR+ + D ++      G+ P+ TP +   D   K         + +F
Sbjct: 222 GLPLWTPKGTIIRSTLEDFLKQEQLKRGYLPVVTPHIGRVDLF-KISGHWQNYKEDMF 278


>gi|37522455|ref|NP_925832.1| threonyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|73919794|sp|Q7NCU0|SYT_GLOVI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|35213456|dbj|BAC90827.1| threonyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 627

 Score = 48.7 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 52/145 (35%), Gaps = 19/145 (13%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              V I  +      +   +     L +  +R
Sbjct: 500 HRAPFGSLERFIAILIEHFAGDFPLWLAPEQVRILPV--TDQFVGYAESVKDRLVSLEMR 557

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE+   S +  G +++  +    P+ ++ G  E + G + ++   +G++           
Sbjct: 558 AEVDASSER-LGKKIRNGETAKVPVLLVVGESEANSGTVAVRTRVEGEK----------- 605

Query: 467 REARVAQITIPISELVSTVKKILQE 491
                 + T+P+ E ++ +++ L +
Sbjct: 606 -----DKGTLPVEEAIAYLQERLAK 625



 Score = 40.6 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 21/67 (31%), Gaps = 1/67 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  + + +R      G+  + TP +   D   K      +    +F L
Sbjct: 241 GLPLWTPKGALLRYILEEFLRKEQVKRGYQQVVTPHIARVDLF-KTSGHWFKYKDDMFPL 299

Query: 74  QDDDGQW 80
                + 
Sbjct: 300 MATSEEE 306


>gi|227488416|ref|ZP_03918732.1| glycyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227543028|ref|ZP_03973077.1| glycyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227091630|gb|EEI26942.1| glycyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181250|gb|EEI62222.1| glycyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 461

 Score = 48.7 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 27/90 (30%), Gaps = 3/90 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +          +   Q LR  G    +   +S   G + +  D    P  +    
Sbjct: 368 VAVLPLSKKDTLTPLAEEIAQTLR--GYW-NVDYDTSGAIGRRYRRQDEIGTPYCVTVDF 424

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWR 467
                  + ++D    ++   +I   E + 
Sbjct: 425 DSLEDHAVTVRDRDTMQQERVKIDELEGYL 454


>gi|198275235|ref|ZP_03207766.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135]
 gi|198271818|gb|EDY96088.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135]
          Length = 646

 Score = 48.7 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/375 (10%), Positives = 90/375 (24%), Gaps = 30/375 (8%)

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
           ARY  +         +   +      +             + +              +  
Sbjct: 286 ARYDYQEVMCPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCMIYK 345

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
                         +  +  R    G + +    G+     R+      D         V
Sbjct: 346 N---------SPRSYRDLPLRIAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQV 396

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           K        D          L + +   +      + EK +       K   A  +   E
Sbjct: 397 KDEFLRVM-DIISIVFTSMGLENFEAQ-ISLRDKENREKYIGSDENWEKAEQAIVEACEE 454

Query: 272 --LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
             L    E    +             +             I     + E+ +    GS  
Sbjct: 455 KGLKAKVEYGEAAF-----YGPKLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYMGSDN 509

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
                     + +   +    F      + V ++              V I  +    + 
Sbjct: 510 ---------QKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPDQVAILPISEKFND 560

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
            +        L+   +RA +    ++  G +++  + +  P  +I G  E   G + ++ 
Sbjct: 561 YAD--KVRMELKKYDVRALVD-DRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVAVRK 617

Query: 450 LAKGKELSREIKNNE 464
             +G + + +I+   
Sbjct: 618 QGEGDKGTMKIEEFA 632


>gi|317179366|dbj|BAJ57154.1| prolyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 577

 Score = 48.7 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + LR  
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKN 462
           G+ A +    ++ FG +++  +     L +I G         + IK     K++ ++ + 
Sbjct: 508 GVDALLDDRDAR-FGAKMRDFELIGERLVLIVGKQTLESKEFECIKRANLEKQVLKDTEL 566

Query: 463 NESWREARVAQ 473
            E   E   ++
Sbjct: 567 EEKILEMLESE 577



 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 8/73 (10%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I    +  +    +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILMSFVVLASLWERS-GRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|294084802|ref|YP_003551562.1| threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664377|gb|ADE39478.1| Threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 641

 Score = 48.7 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 44/163 (26%), Gaps = 1/163 (0%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   I   +R   E  G+  ++TP L    +L +     D+  + +F+ 
Sbjct: 262 GSVFWHQKGWFIYREIESYVRRRLEQAGYGEVKTPQLVDR-TLWEESGHWDKFRENMFTA 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q +D + ++L+        +   +   +                 +              
Sbjct: 321 QSEDERTLALKPMNCPCHVQIFRQGIKSYRDLPLRMAEFGSCHRNEPSGALHGIMRVRAF 380

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
               +     + ++          +     D+       K  D
Sbjct: 381 TQDDAHIFCTEDQITEESVQFCALLQSIYADFGFTDVRVKFSD 423



 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 45/361 (12%), Positives = 98/361 (27%), Gaps = 22/361 (6%)

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
           E+ G G  +     D      S         M  A + +   +     +   + +    G
Sbjct: 286 EQAGYGEVKTPQLVDRTLWEESGHWDKFRENMFTAQSEDERTLALKPMNCPCHVQIFRQG 345

Query: 178 ILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQI 237
           I     L    ++ E     R        G+  V+        D++  F     +T E +
Sbjct: 346 IKSYRDLPL--RMAEFGSCHRNEPSGALHGIMRVRA----FTQDDAHIFCTEDQITEESV 399

Query: 238 DIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR 297
                  SI  +    ++            G +     +E       ++ +++ +     
Sbjct: 400 QFCALLQSIYADFGFTDVRVKFSDRPEVRAGDDATWDKAESALTDACSAAKLETTLNPGE 459

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT---GFSIG 354
           G  Y     +  +      + +   +    V         V     ++ P          
Sbjct: 460 GAFYGPKLEF-VLRDAIGRDWQCGTLQVDFVLPERLDAEYVGEDGNRHRPVMLHRAILGS 518

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
           + R I  L    S       + PV I        +    +   +     G+R E    + 
Sbjct: 519 MERWIGILIEQYSGRMPNW-LAPVQIVVASITDSANDYAEQVARTAEAMGLRVERDFRNE 577

Query: 415 K-NFG----NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K ++     + +K       P  +  G  E   G + ++ L    +   ++K   +    
Sbjct: 578 KISYKVREHSVMK------VPFILAVGGREAEAGTVALRRLGSNDQTVLDMKEALAMLRD 631

Query: 470 R 470
            
Sbjct: 632 E 632


>gi|237653686|ref|YP_002890000.1| threonyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|237624933|gb|ACR01623.1| threonyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 638

 Score = 48.7 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/350 (9%), Positives = 99/350 (28%), Gaps = 10/350 (2%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +     G   +++        +   +    +    M +D +     +
Sbjct: 266 HAKGWTLWQQVEQYLRRTIGEHGYQEVKT---PQIVDRSLWEKSGHWGMYSDLMFTTQSE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           + DY +   N      I  +      D                   L G+ + +     D
Sbjct: 323 KRDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGI-MRVRNFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F   + + +E  + +     +  +    ++   +        G +E    +E    
Sbjct: 382 DAHIFCAESQVQAESAEFIRLLQQVYQDFGFTDVQVKLSTRPEKRVGTDEQWDAAEAALA 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLV 338
           +  ++  ++       G  Y     +        + +              G    D   
Sbjct: 442 AALDAQGLQYELQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPVRLGAEYVDEDN 501

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
           ++     +           + + ++    +      + PV    M+         +    
Sbjct: 502 TKKVPVMLHRAILGSLERFIGILIEHHAGAMPLW--LAPVQAVVMNISEGQAEYAEEAVA 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            L+ AG R E  L  ++    +++    +  P  I+ G  E++ G++ ++
Sbjct: 560 RLKKAGFRVEADL-RNEKINYKIREHSVQKLPYQIVIGEKEKAAGLVAVR 608



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/160 (8%), Positives = 44/160 (27%), Gaps = 2/160 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R     +G+  ++TP +       K        +  +F+ 
Sbjct: 261 GMVFWHAKGWTLWQQVEQYLRRTIGEHGYQEVKTPQIVDRSLWEKS-GHWGMYSDLMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q  + +  +++        +   +   +                 +            + 
Sbjct: 320 Q-SEKRDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGIMRVRNF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
               +    A++++    A+ +  +     D+       K
Sbjct: 379 VQDDAHIFCAESQVQAESAEFIRLLQQVYQDFGFTDVQVK 418


>gi|4619|emb|CAA26666.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 734

 Score = 48.7 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 43/143 (30%), Gaps = 23/143 (16%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             + A+ +   +      + P  +  +          +     L  AG  A++ L  +  
Sbjct: 607 ERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYADVDLTGNTL 666

Query: 417 FGN----QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  Q+            I G  E +   + I++    ++              +  
Sbjct: 667 QKKVRNGQM-----LKYNFIFIVGEQEMNEKSVNIRNRDVMEQ--------------QGK 707

Query: 473 QITIPISELVSTVKKILQENKEE 495
             T+ + E++  ++ +  E + +
Sbjct: 708 NATVSVEEVLKQLRNLKDEKRGD 730



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D +R  Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 352 WLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 410

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 411 -ETFGLKPMNCPG 422


>gi|169351083|ref|ZP_02868021.1| hypothetical protein CLOSPI_01862 [Clostridium spiroforme DSM 1552]
 gi|169292145|gb|EDS74278.1| hypothetical protein CLOSPI_01862 [Clostridium spiroforme DSM 1552]
          Length = 457

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/239 (10%), Positives = 54/239 (22%), Gaps = 28/239 (11%)

Query: 253 HELYELVKGTIAGEKG--FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
               + +K     ++   F +           G                       Y+  
Sbjct: 239 DYCKKFLKDLGIKDENLRFRDHEKEELSFYSKGTCDVEYNFPFGWGELWGIADRTDYDLT 298

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK--SLESS 368
                 N  +K + +       +Y   V              +  S     L+       
Sbjct: 299 ---QHQNHSKKSLEYLDPTTNEKYIPYVIEPSVGADRLFLSVLCDSYEEETLEDGETRVV 355

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              +  + P  +  +        K      ML       E  +  +   G + +  D   
Sbjct: 356 MKLLPALAPYKVAILPLTKKQSDKASEVYSML-AKHFSCEFDV--AGQIGKRYRRQDAIG 412

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
            P  +           + ++D    +++                   +PI ELV  + K
Sbjct: 413 TPFCVTVDFDTLEDNTVTVRDRDTMEQI------------------RLPIDELVDYISK 453


>gi|15892219|ref|NP_359933.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|22654126|sp|Q92IX4|SYT_RICCN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|15619354|gb|AAL02834.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 635

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/382 (9%), Positives = 94/382 (24%), Gaps = 10/382 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           +F         +                ++  +     V        +    +       
Sbjct: 254 HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASGHWEKFR 313

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D + A+        +   N      I ++      D                   L G+ 
Sbjct: 314 DDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +T E +        +  +    ++            G NE+
Sbjct: 373 MRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEIRAGSNEV 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E   K          +     G  Y     +  +        +   +    V    
Sbjct: 433 WDKAENALKEAVEQAGFNYTLNPGEGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLPER 491

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                V+    +  P       +G     + +   E +      + PV +      SD  
Sbjct: 492 LDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWLAPVQVAIATITSDLN 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G+R +  +   K    +++    +  P+  + G  E+    + I+ L
Sbjct: 552 DYALEVQKALIDNGVRTDFNISPDK-INYKIREFSNQKIPMIAVIGKQEQENKQVAIRRL 610

Query: 451 AKGKELSREIKNNESWREARVA 472
               +    ++   +  +    
Sbjct: 611 GTTDQEVLSVEQLIAVVKEENE 632



 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +     ++    +F+L
Sbjct: 261 GMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK-SLWEASGHWEKFRDDMFAL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 ET-DDKTLALKPMNCP 334


>gi|14318437|ref|NP_116578.1| Ths1p [Saccharomyces cerevisiae S288c]
 gi|730881|sp|P04801|SYTC_YEAST RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|556869|emb|CAA86092.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|285812573|tpg|DAA08472.1| TPA: Ths1p [Saccharomyces cerevisiae S288c]
          Length = 734

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D +R  Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 352 WLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 410

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 411 -ETFGLKPMNCPG 422



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 43/143 (30%), Gaps = 23/143 (16%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             + A+ +   +      + P  +  +          +     L  AG  A++ L  +  
Sbjct: 607 ERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYADVDLTGNTL 666

Query: 417 FGN----QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  Q+            I G  E +   + I++    ++              +  
Sbjct: 667 QKKVRNGQM-----LKYNFIFIVGEQEMNEKSVNIRNRDVMEQ--------------QGK 707

Query: 473 QITIPISELVSTVKKILQENKEE 495
             T+ + E++  ++ +  E + +
Sbjct: 708 NATVSVEEVLKQLRNLKDEKRGD 730


>gi|332876867|ref|ZP_08444621.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332685150|gb|EGJ57993.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 492

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/255 (10%), Positives = 70/255 (27%), Gaps = 31/255 (12%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK----ISSTIVRGLEYYTGCVYEAI 310
             E        E+   E   +  +      N   +       +   R          EA+
Sbjct: 171 WQEGHTAHATKEEAIEESERMMNVYANFVENFMAVPVIRGFKTETERFAGADETYCIEAM 230

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G            ++   Q           +RL+ AL        
Sbjct: 231 MQDGKALQAGTSHFLGQNFAKAFDVKYATKDGKQEYVWASSWGVSTRLMGALIMTHSDDN 290

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +   +  L   +       + LR  GI  +     +++ G + 
Sbjct: 291 GLVLPPNLAPIQVVIVPIYKGAAQLESVRERISPLMEALRKQGISVKFDDRDTQSPGFKF 350

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + +  P+ +  G  +      ++                   R   + + T+   ++
Sbjct: 351 HEYELKGVPVRLAVGQRDLENNTFEV------------------ARRDTLTKETVSGDDI 392

Query: 482 VSTVKKILQENKEEI 496
           ++ + ++L+E +E +
Sbjct: 393 IAHIAQLLKEIQENL 407


>gi|326334002|ref|ZP_08200231.1| glycine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948151|gb|EGD40262.1| glycine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 466

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           + +  +  +     K +  +  LR      +     S++ G + +  D    P  +    
Sbjct: 373 IAVLPLSRNEALSPKAKALSAELR-QNWAVDFD--DSQSIGKRYRRQDEIGTPYCVTVDF 429

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + I++    K+    ++    +   R
Sbjct: 430 DTLEDNAVTIRERDTMKQERIPLEGVSRYFAER 462


>gi|317503053|ref|ZP_07961132.1| threonine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315665826|gb|EFV05414.1| threonine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 649

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 44/133 (33%), Gaps = 3/133 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +          +   Q   T G+R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYAKQVGQYFDTVGVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           + +    ++  G +++  + +  P  +I G  E + G++ ++    G++ + +++     
Sbjct: 578 SVID-DRNEKIGRKIRDNELKRIPYMVIVGEKEAAEGLVSMRKQGGGEQATMKMEEFAKR 636

Query: 467 REARVAQITIPIS 479
               VA     + 
Sbjct: 637 ITDEVADQLKTLD 649


>gi|312793587|ref|YP_004026510.1| glycyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180727|gb|ADQ40897.1| glycyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 434

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 31/106 (29%), Gaps = 3/106 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +         +  +    + + K +     L     +  +    S + G + +  D 
Sbjct: 329 LHLHPAIAPVKAAVFPLMKKEELVKKAKEIYNEL---KYKWIVQYDESGSIGKRYRRQDE 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P  I           + I+D    +++   IK    + E R+ 
Sbjct: 386 IGTPFGITVDYQTLEDETVTIRDRDTMEQVRVHIKEIIPYLEERIE 431


>gi|262368848|ref|ZP_06062177.1| prolyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262316526|gb|EEY97564.1| prolyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 572

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 46/160 (28%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ N++   +     N G   +  P+ + + SL +      + 
Sbjct: 31  MIRKLASGLYTWLPMGVRVLNKVAAIVHEEMNNAGSLEVLMPVTQPA-SLWEESGRYVQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              +   +D  G    L     ++   LAR   +++  +          +R     R   
Sbjct: 90  GPELLRFKDRHGNPFVLGPTHEEVITDLARNELKSYKQLPANFYQVQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F         +   S +     M          +G
Sbjct: 150 MRSREFIMKDAYSFHSNQESLQETYDIMYDAYCKIFTRLG 189


>gi|256273733|gb|EEU08659.1| Ths1p [Saccharomyces cerevisiae JAY291]
          Length = 734

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 43/143 (30%), Gaps = 23/143 (16%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             + A+ +   +      + P  +  +          +     L  AG  A++ L  +  
Sbjct: 607 ERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYADVDLTGNTL 666

Query: 417 FGN----QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  Q+            I G  E +   + I++    ++              +  
Sbjct: 667 QKKVRNGQM-----LKYNFIFIVGEQEMNEKSVNIRNRDVMEQ--------------QGK 707

Query: 473 QITIPISELVSTVKKILQENKEE 495
             T+ + E++  ++ +  E + +
Sbjct: 708 NATVSVEEVLKQLRNLKDEKRGD 730



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D +R  Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 352 WLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 410

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 411 -ETFGLKPMNCPG 422


>gi|217033470|ref|ZP_03438900.1| hypothetical protein HP9810_1g84 [Helicobacter pylori 98-10]
 gi|216944175|gb|EEC23603.1| hypothetical protein HP9810_1g84 [Helicobacter pylori 98-10]
          Length = 577

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + LR  
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKN 462
           G+ A +    ++ FG +++  +     LA+I G         + IK     K+  ++ + 
Sbjct: 508 GVDALLDDRDAR-FGAKMRDFELIGERLALIIGKQTLESKEFECIKRANLEKQTLKDTEL 566

Query: 463 NESWREARVAQ 473
            E   E   ++
Sbjct: 567 EEKILEMLESE 577



 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|151943085|gb|EDN61420.1| threonyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 734

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 43/143 (30%), Gaps = 23/143 (16%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             + A+ +   +      + P  +  +          +     L  AG  A++ L  +  
Sbjct: 607 ERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYADVDLTGNTL 666

Query: 417 FGN----QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  Q+            I G  E +   + I++    ++              +  
Sbjct: 667 QKKVRNGQM-----LKYNFIFIVGEQEMNEKSVNIRNRDVMEQ--------------QGK 707

Query: 473 QITIPISELVSTVKKILQENKEE 495
             T+ + E++  ++ +  E + +
Sbjct: 708 NATVSVEEVLKQLRNLKDEKRGD 730



 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D +R  Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 352 WLPHGTRIYNTLVDLLRTEYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 410

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 411 -ETFGLKPMNCPG 422


>gi|169607863|ref|XP_001797351.1| hypothetical protein SNOG_06993 [Phaeosphaeria nodorum SN15]
 gi|111064524|gb|EAT85644.1| hypothetical protein SNOG_06993 [Phaeosphaeria nodorum SN15]
          Length = 373

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 5/140 (3%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVAL-KSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           DG             G S  I  +   L  S   +   +       I       +     
Sbjct: 237 DGKTREAVQMGCHGIGVSRLIGAIASLLSDSKGLNWPRVMAPYEAAILVAPQIEE--GGA 294

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +     L   G+ A +     K+ G +L+ AD    P+ ++ G   + +G+++++     
Sbjct: 295 ERVYDAL--DGVDAVLDDREGKSLGWKLRDADLIGYPVVVVMGRSWKEKGVVEVQCRRLD 352

Query: 454 KELSREIKNNESWREARVAQ 473
            +    +   +S     + Q
Sbjct: 353 VKKDVGLDELKSEVSGLLEQ 372


>gi|227503138|ref|ZP_03933187.1| glycyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|306836623|ref|ZP_07469589.1| glycyl-tRNA synthetase beta subunit [Corynebacterium accolens ATCC
           49726]
 gi|227076199|gb|EEI14162.1| glycyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|304567453|gb|EFM43052.1| glycyl-tRNA synthetase beta subunit [Corynebacterium accolens ATCC
           49726]
          Length = 459

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 32/93 (34%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +    +  +  +     LR      +  +  +   G + +  D    P  +    
Sbjct: 366 VAVLPLSKKEELSTPARELADKLRAY-WNVDFDVSGA--IGRRYRRQDEVGTPFCVTFDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    ++   +I++ ES+  AR
Sbjct: 423 DSLEDNAVTVRERDTMEQERVKIEDLESYLAAR 455


>gi|194477315|ref|YP_002049494.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora]
 gi|171192322|gb|ACB43284.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora]
          Length = 599

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 4/111 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVF 71
            G         RIR  I D  R  +   G++ + TP +  +D  L K     D  ++ +F
Sbjct: 218 SGLVFWHPNGARIRLLIEDFWRQSHLEAGYELLYTPHI--ADIRLWKTSGHLDFYSESMF 275

Query: 72  SLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
           S    D +   L+           A    +    P R   +G V+R E+ G
Sbjct: 276 SPMQVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYERPG 326



 Score = 41.7 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +    + ++  +     L+ AG+RA +     +  G  ++  +++  P+  + G  
Sbjct: 499 QIRLLPVTDEVITYAEELLSQLKIAGVRASIDRTGDR-LGKLIRNGEQKKIPILAVVGAK 557

Query: 439 ERSRGMLQIKDLAKGK 454
           E   G   ++   +G+
Sbjct: 558 EAEVGGASLRSRYEGE 573


>gi|163786094|ref|ZP_02180542.1| prolyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877954|gb|EDP72010.1| prolyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 492

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 72/264 (27%), Gaps = 33/264 (12%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E ++        + E       +           + +   R    
Sbjct: 168 EFLWQEGHTAHATKVEALEEAEQMNNVYAEFAENFMAI------PVIKGVKTESERFAGA 221

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G            +     +          +RL+ A
Sbjct: 222 EETFCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFTNNEGKLDHVWATSWGVSTRLMGA 281

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +  + +       K    ++ L+  G+  +    
Sbjct: 282 LIMTHSDDKGLVLPPNLAPFQVVIVPIYKNDEQFDLISKKANTISKELKALGVSCKFDKR 341

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           S+   G +    + +  PL I  G  +     +++                   R   + 
Sbjct: 342 STHRPGAKFAQHELQGVPLRIAIGPKDLENNTVEL------------------ARRDTLT 383

Query: 473 QITIPISELVSTVKKILQENKEEI 496
           +  + + +L  T+K +L++ + E+
Sbjct: 384 KEIVQMDDLTQTIKGLLEKIQNEL 407


>gi|332247927|ref|XP_003273115.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial [Nomascus
           leucogenys]
          Length = 475

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 47/153 (30%), Gaps = 15/153 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 90  LLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAE-LWQATNRWDLMGKELLRLRDRH 148

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 149 GKEYCLGPTHEEAITALIA---SQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFY 205

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D+   +A+   + +C         +G
Sbjct: 206 MKDMYTFDSSPEAAQQTYSLVCDAYCSLFNRLG 238


>gi|298253424|ref|ZP_06977216.1| glycyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532819|gb|EFH71705.1| glycyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 506

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/98 (9%), Positives = 29/98 (29%), Gaps = 2/98 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  +  Q     LR       +    +   G + +  D    PL +      
Sbjct: 370 VLPLSKKPELQAVAQDLAADLRQHDW--VIDYDEAGAIGRRYRREDEIGTPLCVTVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
                + I++    ++    +     +  +R+ +  + 
Sbjct: 428 LEDHAVTIRERDTMQQERVSLDKVADYVASRINEKRVK 465


>gi|283782944|ref|YP_003373698.1| glycine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|297242774|ref|ZP_06926712.1| glycyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|283441426|gb|ADB13892.1| glycine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|296888985|gb|EFH27719.1| glycyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 506

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/98 (9%), Positives = 29/98 (29%), Gaps = 2/98 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  +  Q     LR       +    +   G + +  D    PL +      
Sbjct: 370 VLPLSKKPELQAVAQDLAADLRQHDW--VIDYDEAGAIGRRYRREDEIGTPLCVTVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
                + I++    ++    +     +  +R+ +  + 
Sbjct: 428 LEDHAVTIRERDTMQQERVSLDKVADYVASRINEKRVK 465


>gi|218186121|gb|EEC68548.1| hypothetical protein OsI_36857 [Oryza sativa Indica Group]
          Length = 490

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 31/112 (27%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ--MYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                   +      V I  M+       +         LR+ GI   +     +  G  
Sbjct: 379 DERGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYNTLRSHGIDVILDDRKER-PGVM 437

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +    P +I+ G        ++ K+   G++   +      +   ++ 
Sbjct: 438 FADMELIGVPHSIVIGDRNLDNEEIEYKNRRVGEKQMIKTGEIVDFLLGQIK 489


>gi|126652268|ref|ZP_01724447.1| glycyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591000|gb|EAZ85112.1| glycyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 470

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/235 (8%), Positives = 57/235 (24%), Gaps = 10/235 (4%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       + + + +       + +           
Sbjct: 234 LEFFCKPGEDLEWHSYWKEFCKNWLLNLGMKEDSMRLRDHEDDELSHYSNATTDIEFKFP 293

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           + +    +      +       +  +      ++ A   ++     
Sbjct: 294 FGWGELWGIADRTDYDLKQHMEHSGEDFTYIDPVSNERYIPYCIEPSLGADRVTLAFLCD 353

Query: 359 IVALKSLESSTNN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + LE             + P     +        +       LR A    +     
Sbjct: 354 AYDEEELEGDDKRTVLRFHPAIAPFKAAVLPLSKKLSDEATDVWAELRKA-FPVDFD--E 410

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           S++ G + +  D    P  I      +  G + ++      ++   I   +++ E
Sbjct: 411 SQSIGKRYRRQDEIGTPFCITYDFDSKEDGQVTVRHRDSMTQVRMPISEVKAYIE 465


>gi|108562666|ref|YP_626982.1| prolyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373844|sp|Q1CUR4|SYP_HELPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|107836439|gb|ABF84308.1| prolyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 577

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 87/295 (29%), Gaps = 14/295 (4%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +++    L          L+ VK L        N+ +  + +    +   ++  F+    
Sbjct: 286 IHKDKETLACFFVRGDDNLEEVKALNALNIIGANALELREASQKDLDSAGLIAGFIGPYG 345

Query: 249 EKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            K         E +K       G NE    +  V   G+ +        +          
Sbjct: 346 LKKHVPYIIFDEDLKEGDCLITGANEKDFHAVGVDLKGFENLVYADIVQVKESDHCPNCQ 405

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +    K     +      +     + +   +   G  I  SRL+ A+   
Sbjct: 406 GALKYHKSLEVGHIFKLGQGYAKSLRASFLDKNGKEQFFEMGCYGIGI--SRLLSAILEQ 463

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +        T N      V++ +   D           + L   G+ A +    ++ FG 
Sbjct: 464 KSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDAR-FGA 522

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
           +++  +     LA+I G         + IK     K+  ++I+  E   E   ++
Sbjct: 523 KMRDFELIGERLALIIGKQTLENKEFECIKRANLEKQTIKDIELEEKILEMLASE 577



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|56749447|sp|Q7MK65|SYT_VIBVY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 642

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 95/350 (27%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 299 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E  + +              +
Sbjct: 359 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    S  I        G  Y     +     F  
Sbjct: 418 AVKLSTRPEQRVGSDEIWDQSEEALKQALESMDIAYEIQEGEGAFYGPKIEF---TLFDC 474

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +    +              G  Y G  +      +        + R I  L    +   
Sbjct: 475 LGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 534

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +  M+         Q   Q L+  GIRA+  L  ++  G +++    +  P
Sbjct: 535 PTWLAPEQAV-IMNITDKQADYVQEIAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVP 592

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  S+ + ++A   + + E
Sbjct: 593 FMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQIASRKLNLEE 642



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 43/152 (28%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   + + ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQDEVTNCIKMV 405


>gi|37680129|ref|NP_934738.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|37198875|dbj|BAC94709.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 655

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 95/350 (27%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 312 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 371

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E  + +              +
Sbjct: 372 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDNI 430

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    S  I        G  Y     +     F  
Sbjct: 431 AVKLSTRPEQRVGSDEIWDQSEEALKQALESMDIAYEIQEGEGAFYGPKIEF---TLFDC 487

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +    +              G  Y G  +      +        + R I  L    +   
Sbjct: 488 LGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 547

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +  M+         Q   Q L+  GIRA+  L  ++  G +++    +  P
Sbjct: 548 PTWLAPEQAV-IMNITDKQADYVQEIAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVP 605

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  S+ + ++A   + + E
Sbjct: 606 FMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQIASRKLNLEE 655



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 43/152 (28%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 270 MQQEAP-GMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDR-VLWERSGHWDKY 327

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 328 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 386

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   + + ++ V
Sbjct: 387 IMRVRGFTQDDAHIFCTESQIQDEVTNCIKMV 418


>gi|27365716|ref|NP_761244.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|31340449|sp|Q8DA13|SYT_VIBVU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|27361865|gb|AAO10771.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 642

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 95/350 (27%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 299 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E  + +              +
Sbjct: 359 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    S  I        G  Y     +     F  
Sbjct: 418 AVKLSTRPEQRVGSDEIWDQSEEALKQALESMDIAYEIQEGEGAFYGPKIEF---TLFDC 474

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +    +              G  Y G  +      +        + R I  L    +   
Sbjct: 475 LGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 534

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +  M+         Q   Q L+  GIRA+  L  ++  G +++    +  P
Sbjct: 535 PTWLAPEQAV-IMNITDKQADYVQEIAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVP 592

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  S+ + ++A   + + E
Sbjct: 593 FMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQIASRKLNLEE 642



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 43/152 (28%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSVFRDLEVFIREKLTEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   + + ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQDEVTNCIKMV 405


>gi|58582810|ref|YP_201826.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58427404|gb|AAW76441.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 671

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 299 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 356

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 357 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 403



 Score = 38.7 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R I  L    +       + PV +   +      
Sbjct: 531 GAEYVDENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFP-SWLAPVQVVVANITDAQA 589

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++  
Sbjct: 590 DYVDAVRKTLANQGFRVSADL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRT- 647

Query: 451 AKGK 454
             G+
Sbjct: 648 RSGE 651


>gi|332880939|ref|ZP_08448609.1| glycine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681113|gb|EGJ54040.1| glycine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 513

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/106 (10%), Positives = 28/106 (26%), Gaps = 8/106 (7%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K       LR              + G + +  D    P  +      
Sbjct: 415 VMPLVKKDGLPEKAHEIISNLR---FHFNCKYDEKDSIGKRYRRQDAIGTPYCVTVDYDT 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                + ++     ++    I + +   E R     + I+ L+  +
Sbjct: 472 LKDNTVTLRHRDTMEQKRVNIADLQGIIEDR-----VSITSLLKKI 512


>gi|330996112|ref|ZP_08320005.1| glycine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329573883|gb|EGG55464.1| glycine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 513

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/106 (10%), Positives = 28/106 (26%), Gaps = 8/106 (7%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K       LR              + G + +  D    P  +      
Sbjct: 415 VMPLVKKDGLPEKAHEIISNLR---FHFNCKYDEKDSIGKRYRRQDAIGTPYCVTVDYDT 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                + ++     ++    I + +   E R     + I+ L+  +
Sbjct: 472 LKDNTVTLRHRDTMEQKRVNIADLQGIIEDR-----VSITSLLKKI 512


>gi|260438844|ref|ZP_05792660.1| glycine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292808683|gb|EFF67888.1| glycine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 462

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/227 (7%), Positives = 55/227 (24%), Gaps = 8/227 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +            +      +E +   +   +     ++       +    +        
Sbjct: 237 EWFRYWRGFCINWLKTLGIKDEEMRARDHSPEELCFYSKGTTDIEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +       S          +      ++ A   ++         + LE   
Sbjct: 297 RTDYDLTQHQNTSGQDMSYFDDEDNSKYIPYVVEPSLGADRVTLAFLCSAYDEEELEGGD 356

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + PV I  +          +     L +     E       N G + +  
Sbjct: 357 VRTVLHFHPALAPVKIGVLPLSKKLNEGAEKIYADL-SKKYNCEFD--DRGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           D    P  +       + G + ++D     +   +I++   + E + 
Sbjct: 414 DEIGTPFCVTYDFDSETDGCVTVRDRDTMAQERIKIEDLNKYFEDKF 460


>gi|160940874|ref|ZP_02088214.1| hypothetical protein CLOBOL_05766 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436118|gb|EDP13885.1| hypothetical protein CLOBOL_05766 [Clostridium bolteae ATCC
           BAA-613]
          Length = 462

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/238 (6%), Positives = 59/238 (24%), Gaps = 9/238 (3%)

Query: 240 MVSFLSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +  F   D + +      E     +      ++ +   +   +     ++       +  
Sbjct: 226 LEFFCKPDTDLEWFAYWKEFCINWLRSLGIKDDELRARDHSPEELSFYSKATTDLEYLFP 285

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           + +   ++      S       +  +      ++ A   ++     
Sbjct: 286 FGWGELWGIADRTDYDLSQHQKVSGQDMSYFDDETKERYIPYVIEPSLGADRVTLAFLCA 345

Query: 359 IVALKSLESST-----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + +         +    + PV +  +          +     L +     E     
Sbjct: 346 AYDEEEIGEGDVRTVLHFHPAIAPVKVGVLPLSKKLNEGAEKIYTEL-SKYFNCEFD--D 402

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             N G + +  D    P  I           + ++D    +++   I + + +   + 
Sbjct: 403 RGNIGKRYRRQDEIGTPFCITYDFDSEEDHAVTVRDRDTMEQVRVPIADLKDYFAEKF 460


>gi|187918575|ref|YP_001884138.1| threonyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689297|sp|B2S162|SYT_BORHD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119861423|gb|AAX17218.1| threonyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 583

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 2/99 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +  ++           + +  GIR ++    +     +++    +  P   I G  
Sbjct: 485 QVIIIPVNNVVEEYALEILSLFKNEGIRIKLDNDCNMRMNAKIRQYQSKKVPYMFIIGEK 544

Query: 439 ERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQITI 476
           E   G + I+      +++  E+K    +   +V    I
Sbjct: 545 EVVEGKISIRT-RTNDQINGLELKEALEFVRLKVKNKEI 582


>gi|10580016|gb|AAG18956.1| proline-tRNA synthetase [Halobacterium sp. NRC-1]
          Length = 465

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 54/253 (21%), Gaps = 15/253 (5%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E  + E    L     L                  +     T    EA+
Sbjct: 127 WQEGHTAHATDEAAWAETTLRLDQYHRLYEDVLGIPVLRGRKPDHDKFPGADTTMSVEAL 186

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G               + +    T       R I AL        
Sbjct: 187 MPDGKSVQGGTSHHLGQSFADAFDITFADEDEAERTAYTTSWGLSWRAIGALVMSHSDDQ 246

Query: 366 ESSTNNIKEMGPVLITTM---DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       V+I  +   D   D           L   G+R        +N G +  
Sbjct: 247 GLVLPPTVAPKQVVIVPIWQEDTKDDVEQYGAEIAAELEAQGVRVHFDDRDGRNPGFKFN 306

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
             +    P+    G  E     + +     G+    +           + ++     +L 
Sbjct: 307 EWELNGVPVRFEIGPNEVEDDEVTVVHRPDGESTVEDRAAIADRVHDHLDEV---YDKLY 363

Query: 483 STVKKILQENKEE 495
                 L EN  E
Sbjct: 364 DAAADRLAENVRE 376


>gi|320156122|ref|YP_004188501.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319931434|gb|ADV86298.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 642

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 95/350 (27%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 299 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E  + +              +
Sbjct: 359 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQDEVTNCIKMVYDTYQTFGFDNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    S  I        G  Y     +     F  
Sbjct: 418 AVKLSTRPEQRVGSDEIWDQSEEALKQALESMDIAYEIQEGEGAFYGPKIEF---TLFDC 474

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           +    +              G  Y G  +      +        + R I  L    +   
Sbjct: 475 LGRAWQCGTVQLDFNLPNRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 534

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +  M+         Q   Q L+  GIRA+  L  ++  G +++    +  P
Sbjct: 535 PTWLAPEQAV-IMNITDKQADYVQEIAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVP 592

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  S+ + ++A   + + E
Sbjct: 593 FMLVCGDQEMEAGEIAVRTRKGNDLGKFKVDDFVSYIQDQIASRKLNLEE 642



 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 43/152 (28%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSVFRDLEVFIREKLAEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   + + ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQDEVTNCIKMV 405


>gi|300712094|ref|YP_003737908.1| prolyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125777|gb|ADJ16116.1| prolyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 482

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 49/193 (25%), Gaps = 8/193 (4%)

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
             A ++    L    ++                  +     T    EA++      +   
Sbjct: 173 DDAWDETMLRLEQYEQVYEDVLAIPVMRGRKPEHDKFPGADTTTTVEALMPDGKSVQGGT 232

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVAL----KSLESSTNNIKEMG 376
               G           V   + + V   T + +    +   +                  
Sbjct: 233 SHHLGQSFAEAFDITYVDEDEEETVAHTTSWGLSWRAIGALIMTHSDDQGLVLPPTVAPE 292

Query: 377 PVLITTMDHDS---DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            V+I  +  +    + L   +     L  AG R E+     +N G +    +    PL +
Sbjct: 293 QVVIVPIWQEENREEVLEYSEGIADDLEEAGFRVELDDRDERNPGFKFNEWELLGTPLRL 352

Query: 434 IQGTGERSRGMLQ 446
             G  E   G + 
Sbjct: 353 EIGPHEVEDGEVT 365


>gi|255692010|ref|ZP_05415685.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260622256|gb|EEX45127.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 646

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 45/135 (33%), Gaps = 3/135 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++              V I  +    +  ++     
Sbjct: 509 NQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKMY 568

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+T  IRA +    ++  G +++  + +  P  +I G  E   G + ++   +G + +
Sbjct: 569 --LKTHEIRAIVD-DRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGT 625

Query: 458 REIKNNESWREARVA 472
            + +         V 
Sbjct: 626 MKFEEFAKILNEEVQ 640


>gi|33866303|ref|NP_897862.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81835080|sp|Q7U5D6|SYP_SYNPX RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33639278|emb|CAE08286.1| Prolyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 593

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 2/75 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         ++  RI   IR      G      P L  S+   +    +        +
Sbjct: 37  SGIYAYLPMMWKVLQRITTIIREEMNRAGALETLLPQLHPSELWQRSGRWQGYTAGEGIM 96

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G+ + L  
Sbjct: 97  FHLEDRQGRELGLGP 111



 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 2/81 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +++   +HD             L  AGI   +     +  G + K AD 
Sbjct: 489 RWPAAIAPYEVIVVIANNHDDAQTDLGDTVYATLLEAGIDVLLDDRKERA-GVKFKDADL 547

Query: 427 RNCPLAIIQGTGERSRGMLQI 447
              P  ++ G    + G +++
Sbjct: 548 IGIPWRLVIGRD-AAEGTVEL 567


>gi|49168658|emb|CAE02700.1| putative threonyl tRNA synthase [Yarrowia lipolytica]
          Length = 461

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/446 (11%), Positives = 114/446 (25%), Gaps = 76/446 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E P G A       RI +R+ + +R     +GF  I +P++ Y +SL K     ++ 
Sbjct: 59  ISPESP-GSAFFLPHGQRIYSRLGEFMRLQLRVFGFQEISSPIM-YKNSLWKQSGHWEKF 116

Query: 67  NKGVFSLQDDD-----GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
              +F +Q         +  SL+             +        +        R     
Sbjct: 117 QDDMFRVQPGHEETSVEEEFSLKPMNCPG-------HCLLFNS-LKRSYRELPLRYSDFS 168

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           P    +     +          D        + +E+   +         N   L+     
Sbjct: 169 PLHRNEASGALIGLTRVRRFHQDDGHIFCTPEQVESEISRALKLVQQTYNTFGLEISRVV 228

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +    +             D       +     + +  + + G +   A   +     + 
Sbjct: 229 LSTRPE---------TFIGDIEQWNDAEKALTSVLDSWSVSKGKWELNAGDGAFYGPKID 279

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             +     K        +               + E  +   ++++       +V    Y
Sbjct: 280 ILVKDKHGKEHQTATTQLD------------FQLPERFQLKYFDASETAQRPVMVHRAVY 327

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
            +   + AIL                    G++   +S  +   +P        +  + A
Sbjct: 328 GSLERFLAILIDH---------------YEGKWPLWLSPRQCMVLPVGEAQNEFAEKVAA 372

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
              L    +   +  P+  +T+  D D+ S+                      +      
Sbjct: 373 --QLSGLPSITDQSTPLSASTLFCDVDTRSETL-------------------GQKIK--- 408

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI 447
             A         + G  E   G + +
Sbjct: 409 -QARNEGYSYIAVIGDKEMQEGKVTV 433


>gi|32140555|dbj|BAC78194.1| prolyl-tRNA synthetase [Raphanus sativus]
          Length = 220

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 22/138 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS----LSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                          V++  + +   +              L  AGIRAE  L  + + G
Sbjct: 21  DDKGLILPPKVASVQVVVIPVPYKDANTQGIFDACTATVSALSEAGIRAEEDLRDNYSPG 80

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +    + +  PL I  G  +     ++                  + R    A+  IP 
Sbjct: 81  WKYSNWEMKGVPLRIEIGPRDLENDQVR------------------TVRRDNGAKEDIPR 122

Query: 479 SELVSTVKKILQENKEEI 496
             LV  VK++L++ +E +
Sbjct: 123 GSLVEHVKELLEKIQENM 140


>gi|213619333|ref|ZP_03373159.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 115

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 1/98 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+            TQ L+ AGIR +  L  ++  G +++    R  P  +
Sbjct: 9   WLAPVQVVVMNITDSQSEYVNELTQKLQNAGIRVKADL-RNEKIGFKIREHTLRRVPYML 67

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           + G  E   G + ++        S ++ +     +  +
Sbjct: 68  VCGDKEVEAGKVAVRTRRGKDLGSLDVNDVIEKLQQEI 105


>gi|188577599|ref|YP_001914528.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188522051|gb|ACD59996.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 649

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 277 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 334

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 335 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 381



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R I  L    +       + PV +   +      
Sbjct: 509 GAEYVDENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFP-SWLAPVQVVVANITDAQA 567

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++  
Sbjct: 568 DYVDAVRKTLANQGFRVSADL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRT- 625

Query: 451 AKGK 454
             G+
Sbjct: 626 RSGE 629


>gi|152980466|ref|YP_001353177.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166223349|sp|A6SY30|SYT_JANMA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|151280543|gb|ABR88953.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 635

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/144 (7%), Positives = 38/144 (26%), Gaps = 2/144 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I  ++   +R +Y++  +  ++ P +     L +     D   + +F +
Sbjct: 261 GLIFWHPKGWSIWQQVEQYMRKVYQDNDYQEVKAPQI-LDRGLWEKTGHWDNYRENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+        +    +  +       Y         +              
Sbjct: 319 TESENRSYALKPMNCPGHVQIYNSDMRSYRDLPLRYGEFGQCHRNEPSGALHGMMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEA 157
                     + ++   +      
Sbjct: 379 TQDDGHIFCTEEQIAEEVTAFHAQ 402



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  ++         Q   Q L+  G R  + L  ++    +++    +  P  I
Sbjct: 535 WLAPVQIAVLNISDAQAEYAQAVAQNLKKQGFRVHLDL-RNEKITYKIREHSVQKLPYII 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  ER  G + ++
Sbjct: 594 VIGDKERDAGTVAVR 608


>gi|21672515|ref|NP_660582.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009415|sp|Q8K9S2|SYP_BUCAP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21623136|gb|AAM67793.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 571

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 1/82 (1%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K+ +  +L  G        IR+ N+I D I+N         +  P+++    L +     
Sbjct: 28  KSGMIRKLSSGIYIWLPTGIRVLNKIKDIIKNEMRKINALEVLMPVVQPKK-LWENSGRL 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
               + +F   D   Q   L  
Sbjct: 87  SIYGEELFQFYDRRNQKFILGP 108


>gi|194910075|ref|XP_001982069.1| GG12386 [Drosophila erecta]
 gi|190656707|gb|EDV53939.1| GG12386 [Drosophila erecta]
          Length = 1712

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 53/159 (33%), Gaps = 22/159 (13%)

Query: 348  ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTA 403
                      ++V   +              ++           D  ++     + L   
Sbjct: 1472 GITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTKDDERAQLLDACKDLEKR 1531

Query: 404  ----GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSR 458
                G+R E     + + G +  + + +  PL +  G  +      + ++    G++++ 
Sbjct: 1532 LVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDLKAKQLVAVR-RDTGEKITI 1590

Query: 459  EIKNNESWREARVAQITIPISELVSTVKK-ILQENKEEI 496
             + + E             I+ L+ T+ + +L++ +E++
Sbjct: 1591 PLADVEK-----------KIAALLETIHESMLKKAQEDM 1618


>gi|162147243|ref|YP_001601704.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209544293|ref|YP_002276522.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|189083610|sp|A9HFP5|SYT_GLUDA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161785820|emb|CAP55391.1| Threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531970|gb|ACI51907.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 641

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 65/234 (27%), Gaps = 8/234 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   + + +E    +     +  +                  G +E    +E   
Sbjct: 384 DDAHIFCTESQIAAETARFVRMLAEVYADLGFESFRVKFADRPEQRAGSDETWDRAEGAL 443

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
                   ++       G  Y      E +L   +  + Q   +        R D     
Sbjct: 444 IEACRLAGVEYEYNPGEGAFYG--PKLEFVLRDAIGRDWQCGTLQVDYVLPERLDASFVG 501

Query: 341 FKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
                               R +  L    +    +  + PV +      +D+    +  
Sbjct: 502 EDSARHRPVMLHRAILGSFERFLGILIEQHAGRFPLW-LAPVQVVVASIVTDAAPYAEQV 560

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
            + L  AG+  E  +  ++    +++       P+ ++ G  E   G + I+ L
Sbjct: 561 AETLTQAGLVVETDI-RNEKINAKVREHSLARVPVILVVGRKEAEDGTVAIRRL 613



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 71/257 (27%), Gaps = 18/257 (7%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF--SLQD 75
              K  R+   + D +R      G+  + TP L    +L +     D+  + +F  +++D
Sbjct: 266 WHPKGWRLYTALQDYMRRAQTRGGYQEVRTPQLVDR-ALWEASGHWDKYREHMFIATVED 324

Query: 76  DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP-VFRNEKHGPGRFRQFIQCDVD 134
           +D + ++L+        +    +                     +               
Sbjct: 325 ED-KTLALKPMNCPCHVQIF-RHGLRSYRELPLRMAEFGACHRYEPSGALHGIMRVRSFT 382

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
              +     ++++    A  +  +     D               E   +   D+  +R 
Sbjct: 383 QDDAHIFCTESQIAAETARFVRMLAEVYADLG------------FESFRVKFADRPEQRA 430

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                 D+ +   ++  +L   E   +       G  L     D +         +  + 
Sbjct: 431 GSDETWDRAEGALIEACRLAGVEYEYNPGEGAFYGPKLEFVLRDAIGRDWQCGTLQVDYV 490

Query: 255 LYELVKGTIAGEKGFNE 271
           L E +  +  GE     
Sbjct: 491 LPERLDASFVGEDSARH 507


>gi|126740677|ref|ZP_01756363.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126718192|gb|EBA14908.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 649

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 75/268 (27%), Gaps = 25/268 (9%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F     + SE    +     +  +   H     +        G +E   + E   
Sbjct: 392 DDGHIFCSEDQIESETAKFIAFLSKVYADLGFHNWTIKLSTRPEKRIGSDESWDLVEKAL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                +   +       G  Y     +   +AI         Q                 
Sbjct: 452 GDACKAAGYEYEVLEGEGAFYGPKLEFTLTDAIGRNWQCGTLQVDPNLPERLEANFIGQD 511

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            ++ +   +           + + ++              V++ ++  D+D         
Sbjct: 512 GNKHRPFMLHRACLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSDAD--DYVNEVV 569

Query: 398 QMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           + LR AG+RAE  + + K        + G           P+ +  G  E     + ++ 
Sbjct: 570 ETLRAAGVRAEADIRNEKINYKVREHSVGK---------VPVILAVGHREVEERTVSVRR 620

Query: 450 LAKGKELSREIKNNESWREARVAQITIP 477
           L  G++ + +++  +        + T P
Sbjct: 621 L--GEKQT-KVEGLDETVAKLTQEATPP 645


>gi|115475758|ref|NP_001061475.1| Os08g0295300 [Oryza sativa Japonica Group]
 gi|38175524|dbj|BAD01219.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|38175707|dbj|BAD01414.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113623444|dbj|BAF23389.1| Os08g0295300 [Oryza sativa Japonica Group]
 gi|215687347|dbj|BAG91912.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 745

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/126 (10%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+               ++ ++   S+S+   +     +  AG  
Sbjct: 620 HRAILGSVERMFAILLEHYNGKWPLWLSPRQAIVCSIS--SNSVEYAKQVRARIHEAGFH 677

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +   + +    +++ A        ++ G  E   G + ++   K +  +  I +  + 
Sbjct: 678 VAID-ETDRTIQKKVREAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITR 736

Query: 467 REARVA 472
            +  VA
Sbjct: 737 FKEEVA 742



 Score = 41.4 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N+++D +R  Y + G+  + +P + Y+  L +         + +F  + + 
Sbjct: 375 FLPHGAIIYNKLMDFLRQQYRDRGYQEVLSPNI-YNMQLWETSGHAANYKENMFVFEIEK 433

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 434 -QEFGLKPMNCPG 445


>gi|324504606|gb|ADY41988.1| Bifunctional aminoacyl-tRNA synthetase [Ascaris suum]
          Length = 401

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 45/106 (42%), Gaps = 3/106 (2%)

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            + K +  T +L + GIRAE  L  + + G +  + + +  P+ +  G  + +   +   
Sbjct: 211 LICKAEEITDLLVSVGIRAESDLRDNYSPGWKFNHWELKGVPVRVEVGPRDVANNQVTCV 270

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
               G++ +  +       +  + +I      + + V ++  ++K+
Sbjct: 271 IRLSGEKRAIPVSGLAEASKKMLNEIH---ERMYNKVLEVRDKHKK 313


>gi|317495744|ref|ZP_07954109.1| prolyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914197|gb|EFV35678.1| prolyl-tRNA synthetase [Gemella moribillum M424]
          Length = 566

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 1/82 (1%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDE 63
           K  +  ++  G         ++   I   IR  ++  G   +  PLL+  D   K     
Sbjct: 28  KAGMVKQVSAGVYTYLPLATKVIQNIERVIREEHDKIGAVELLMPLLQSED-YWKESGRW 86

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
            +    +  L+D  G   +L  
Sbjct: 87  YKMGDELMRLKDRKGAGYALSP 108



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +      L+       + L   +     L +AG    ++   ++  G +   AD 
Sbjct: 463 IWPKEVAPFQVHLVCVDVKKQEQLELSEKLYAELTSAGYTV-LYDDRAERAGVKFNDADL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              PL ++ G    + G++++K+    +++   I    S
Sbjct: 522 IGIPLQVVVGKK-ATEGIVEVKERKTLEKVDTSITEVLS 559


>gi|308509394|ref|XP_003116880.1| CRE-TARS-1 protein [Caenorhabditis remanei]
 gi|308241794|gb|EFO85746.1| CRE-TARS-1 protein [Caenorhabditis remanei]
          Length = 749

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   I N+++D IR  Y   GF  + TP + Y+  L +        ++ +F +
Sbjct: 364 GSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNM-YNKKLWETSGHWQHYSEDMFKI 422

Query: 74  QDDDGQWISLRYDLTAP 90
           + +  +   L+      
Sbjct: 423 EVEK-EEFGLKPMNCPG 438



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/155 (9%), Positives = 39/155 (25%), Gaps = 20/155 (12%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           +D    + +   +             +  +S               I T+          
Sbjct: 600 FDEKGEKQRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITVH--ESVRDYA 657

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
               + +  AG   E           Q++ +        ++ G  E+  G + ++     
Sbjct: 658 SDVKKKIFEAGFEVEYDATCGDTMNKQVRNSQLAQFNFILVIGAKEKENGTVNVR----- 712

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                              +  +P+ +L+S  ++ 
Sbjct: 713 -------------TRDNAVRGEVPLEKLLSKFRRF 734


>gi|169244471|gb|ACA50509.1| aminoacyl-tRNA synthase [Oryza sativa Japonica Group]
          Length = 510

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 22/166 (13%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS----DSL 390
           D        QN  A         ++                  V++  + +        +
Sbjct: 272 DKGSRSMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPRVAPLQVIVIPVPYKDVDTTAIV 331

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
           ++ +   + L  AGIRA++   ++ + G +  + + +  PL I  G  + +    ++   
Sbjct: 332 NECKKTVETLEKAGIRADLDTRANYSPGWKYSHWEMKGVPLRIEIGPKDMANNQARV--- 388

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           R    A+  IP ++LV  V  +L E ++ +
Sbjct: 389 ---------------VRRDNGAKADIPTADLVEKVNGLLDEVQKNL 419


>gi|254232730|ref|ZP_04926057.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis C]
 gi|124601789|gb|EAY60799.1| threonyl-tRNA synthetase thrS [Mycobacterium tuberculosis C]
          Length = 692

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 42/112 (37%), Gaps = 5/112 (4%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    + ++  +     L++ G+RAE+     +     + + +    P  +
Sbjct: 577 WLAPVQVVGIPVADEHVAYLEEVATQLKSHGVRAEVDASDDRMAKKIVHHTN-HKVPFMV 635

Query: 434 IQGTGERSRGMLQIKDLAKGKE---LSREIKNNESWREARVAQITIPISELV 482
           + G  + + G +  +      +   ++R+                +P +ELV
Sbjct: 636 LAGDRDVAAGAVSFR-FGDRTQINGVARDDAVAAIVAWIADRGNAVPTAELV 686


>gi|157828174|ref|YP_001494416.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|166225494|sp|A8GR83|SYT_RICRS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157800655|gb|ABV75908.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 635

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/382 (9%), Positives = 94/382 (24%), Gaps = 10/382 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           +F         +                ++  +     V        +    +       
Sbjct: 254 HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASGHWEKFR 313

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D + A+        +   N      I ++      D                   L G+ 
Sbjct: 314 DDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +T E +        +  +    ++            G NE+
Sbjct: 373 MRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEIRAGSNEV 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E   K          +     G  Y     +  +        +   +    V    
Sbjct: 433 WDKAENALKEAVEQAGFTYTLNPGEGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLPER 491

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                V+    +  P       +G     + +   E +      + PV +      SD  
Sbjct: 492 LDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWLAPVQVAIATITSDLN 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G+R +  +   K    +++    +  P+  + G  E+    + I+ L
Sbjct: 552 DYALEVQKALIDNGVRTDFNISPDK-INYKIREFSNQKIPMIAVIGKQEQENKQVAIRRL 610

Query: 451 AKGKELSREIKNNESWREARVA 472
               +    ++   +  +    
Sbjct: 611 GTTDQEVLSVEQLIAVVKEENE 632



 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +     ++    +F+L
Sbjct: 261 GMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK-SLWEASGHWEKFRDDMFAL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 ET-DDKTLALKPMNCP 334


>gi|270157462|ref|ZP_06186119.1| prolyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289164147|ref|YP_003454285.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella longbeachae NSW150]
 gi|269989487|gb|EEZ95741.1| prolyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288857320|emb|CBJ11147.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella longbeachae NSW150]
          Length = 569

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 50/162 (30%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  +I   +R    N     +  P ++ ++ L +     D  
Sbjct: 31  MIRKLGSGLYTWMPLGLKVLRKIEQIVREEMNNINSMEVLMPAVQPAE-LWQETGRWDTF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              + +++D + +         ++   + R+  +++  +          +R     R   
Sbjct: 90  GGQLLTMKDSNDREYCFGPTHEEVITDIMRHELQSYKQLPASFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F             S +    +M        + +G+K
Sbjct: 150 MRAREFIMKDAYSFHLNLESLQDTYKDMYQAYCRIFDRLGLK 191


>gi|262306371|gb|ACY45778.1| his-tRNA synthetase [Libinia emarginata]
          Length = 149

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 18/133 (13%)

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN 222
            ++ I IN+RKILDG+    G+  +    +   +  A+DKLDK   + V+  + +     
Sbjct: 26  GEFTIKINHRKILDGVFGSCGVPAE----KFRPICSAVDKLDKSPWEEVRKEMVDE---- 77

Query: 223 SGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE---LYELVKGTIAGEKGFNELVVISELV 279
                    L     D + +++ +   + + E     EL+K + A + GF +L ++ E  
Sbjct: 78  -------KGLDEAVADKIGNYVKLSGREELLERLMNDELLKTSPAAQAGFADLKLLFEYC 130

Query: 280 RKSGYNSNRIKIS 292
           R  G   + +   
Sbjct: 131 RSLGCAEHVVFDM 143


>gi|99034562|ref|ZP_01314532.1| hypothetical protein Wendoof_01000659 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 339

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 3/105 (2%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +      +E+ P  I  ++  +          + L++  +   ++  +  + G +    D
Sbjct: 238 DKGIIWPEEVAPFRIGLINLQTKVTEAADKIYKALKSDEV---LYDDTEGSVGVKFSRMD 294

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               P  II G    S  ++++K+ A G+    +I+   +   A+
Sbjct: 295 LIGLPWQIIVGKKAVSENIVEVKNRATGEVKEMQIEEAINHFSAK 339


>gi|68250118|ref|YP_249230.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335458|sp|Q4QK77|SYT_HAEI8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|68058317|gb|AAX88570.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 643

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/366 (12%), Positives = 100/366 (27%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L  AG+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQQVVKTLSDAGLRVKADL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
            +L++ 
Sbjct: 637 LKLLNE 642



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|19553476|ref|NP_601478.1| glycyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62391119|ref|YP_226521.1| glycyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|145296232|ref|YP_001139053.1| glycyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|59798594|sp|Q8NNC6|SYG_CORGL RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|21325049|dbj|BAB99671.1| Glycyl-tRNA synthetase, class II [Corynebacterium glutamicum ATCC
           13032]
 gi|41326458|emb|CAF20620.1| GLYCYL-TRNA SYNTHETASE (GLYCINE--TRNA LIGASE) [Corynebacterium
           glutamicum ATCC 13032]
 gi|140846152|dbj|BAF55151.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 461

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/95 (8%), Positives = 26/95 (27%), Gaps = 7/95 (7%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
           V +  +          +     LR         +   +S   G + +  D    P  +  
Sbjct: 368 VAVLPLSKKDTLTPLAEKLAAELREFWN-----VDYDTSGAIGRRYRRQDEIGTPFCVTV 422

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                    + +++    +++   +   + +   R
Sbjct: 423 DFDSLEDNAVTVRERDTMEQVRVPLDELQGYLAQR 457


>gi|313906170|ref|ZP_07839518.1| glycyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469009|gb|EFR64363.1| glycyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 465

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 31/104 (29%), Gaps = 3/104 (2%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +    + PV    +          +    ML ++    E         G + +  D   
Sbjct: 364 MHFHPALAPVKAAVLPLSKKLGESAEKVFDML-SSKFNCE--YDDRGAIGKRYRRQDEIG 420

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            P  I           + I++    ++   +I++ E W E +  
Sbjct: 421 TPFCITYDFDSEEDHAVTIRNRDTMEQERVKIEDLEKWFEGKFD 464


>gi|73951031|ref|XP_857184.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 3
           [Canis familiaris]
          Length = 711

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 34/116 (29%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K   V      +G    ++A+ S          + P  +  +         
Sbjct: 562 TYVSKDGDDKRNPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 621

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +      G  A++ L  S     +++ A        ++ G  E++   + ++
Sbjct: 622 ALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNVR 677



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + ++  L +        ++ +F+  D +
Sbjct: 333 FLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNM-FNSKLWETSGHWQHYSENMFTF-DIE 390

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 391 KDTFALKPMNCPGHCLMFAHR 411


>gi|315122407|ref|YP_004062896.1| threonyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495809|gb|ADR52408.1| threonyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 653

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/373 (13%), Positives = 111/373 (29%), Gaps = 13/373 (3%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
           +          +Y    +  + +               +       A+        +T++
Sbjct: 270 QKGWKTFQTLISYMRRKIKDDYEEINTPQVLDQNLWKQSGHWDWYRANMFAVQCADETIK 329

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
            +            + +I    L+        +L E   V R        GL  V+    
Sbjct: 330 DLRSFALKPMNCPGHVEIFKHGLKSY-RELPVRLAEFGSVYRNEPSGSLHGLMRVRG--- 385

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNEL 272
               D++  F     +  E + I    +SI  +     +   +          +  +++ 
Sbjct: 386 -FTQDDAHVFCTKEQMFEECLKIHNLIVSIYKDFGFENITVKLSTRPEKRVGSDALWDDA 444

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
             I + V  +   S++ KI++ I+ G   + G  +E IL   +  E Q            
Sbjct: 445 ESIMQTVLNTIKTSSQSKINTGILPGEGAFYGPKFEYILKDAIGREWQCGTTQIDFNLPH 504

Query: 333 RYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
           R++      + +            G     + +       +    + PV        S S
Sbjct: 505 RFNAFYINSQSEKCHPVMIHRAVFGSIERFIGIMIENFKGHLPLWLSPVQAVVTTITSSS 564

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           +   Q  T +L++  +  E     ++    +++    +  PL II G  E     + I+ 
Sbjct: 565 IEYAQEVTALLKSNDLSIETDF-RNEKINYKIREHSSKKIPLIIICGDKETQERSIVIRR 623

Query: 450 LAKGKELSREIKN 462
           L      S  I +
Sbjct: 624 LGSKTSQSLNILD 636


>gi|289668713|ref|ZP_06489788.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 634

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 262 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 320 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 366



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 3/124 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R I  L    +       + PV +  ++      
Sbjct: 494 GAEYVDENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFP-SWLAPVQVVVVNITDAQA 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++  
Sbjct: 553 EYVDSVRKTLANQGFRVSADL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRT- 610

Query: 451 AKGK 454
             G+
Sbjct: 611 RSGE 614


>gi|283851379|ref|ZP_06368661.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283573329|gb|EFC21307.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 647

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 5/116 (4%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +  +   ++   D   +   +       L  AGIRAE+    ++  G +++ A 
Sbjct: 530 GALPTWLAPVQARILIVTDAQKEFAEQALA---RLLEAGIRAELD-DRNEKLGFKVREAQ 585

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
               P  ++ G  E+  G L ++ L  G  L  +  +          Q       +
Sbjct: 586 VEKIPYMLVAGDKEKELGGLNVR-LRSGDNLGVKTLDEVVLLITADCQEPFKRGGM 640



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 2/72 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  + D  R  +   G+  +  PL+   +   +     D   + ++  
Sbjct: 262 GMPIWHPKGELVRTILEDFERREHLKRGYSLVRGPLILRRELWERS-GHYDNYRENMY-F 319

Query: 74  QDDDGQWISLRY 85
            + D Q   ++ 
Sbjct: 320 TEIDEQSYGIKP 331


>gi|258512352|ref|YP_003185786.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479078|gb|ACV59397.1| prolyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 483

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 44/133 (33%), Gaps = 6/133 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD---SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                          V+I  +         ++K +     L+ A IR  +      + G 
Sbjct: 280 DDRGLVLPPKLSPTQVVIVPIGPAKAREAVVAKARELFDALKRADIRVHLDDRDDVSPGW 339

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +    + R  P+ +  G  +       +     G++++  +       +A ++ I     
Sbjct: 340 KFNEYELRGVPIRLELGPRDLEASQAVLARRDTGEKITVPLDAVIERVQALLSDI---QR 396

Query: 480 ELVSTVKKILQEN 492
           +L    K+ L+EN
Sbjct: 397 DLFEAAKRRLEEN 409


>gi|222823773|ref|YP_002575347.1| prolyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782892|sp|B9KGB1|SYP_CAMLR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|222538995|gb|ACM64096.1| prolyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 565

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 32/111 (28%), Gaps = 12/111 (10%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIE----TPLLEYSDSLGKF 59
           K     ++  G  +      R+ ++I + I+   +  G   +     TP       L K 
Sbjct: 28  KGAFIEQIGSGLYNFLPLGKRVLDKIKNIIKEEMDKAGALEVNLSFNTPA-----ELWKE 82

Query: 60  LPDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
               +   K +   +D       L     +    L R    ++  +     
Sbjct: 83  SGRFNVFGKELLRFKDRKENDFVLGPTHEEAMVALIRNKITSYKQLPLHLY 133


>gi|332159170|ref|YP_004424449.1| prolyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034633|gb|AEC52445.1| prolyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 480

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 82/254 (32%), Gaps = 33/254 (12%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           + E+    +   A     +    I E +        ++ I+  I +  E+         L
Sbjct: 152 VREISRFFEAHTAHVDFEDAERQIREDLEIFDNLMKKLAIAYIISKRPEWDKFPGAYYSL 211

Query: 312 GFPVMNEKQKPVVFGSVGGGGR---------YDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           G  V+    + +  G++    +         Y+         +    G S  +   ++A+
Sbjct: 212 GAEVVMPDGRTLQIGTMHNYKQNFAKAYNIMYEKEDGTHDYVHQTTFGMSERLLAAVIAI 271

Query: 363 KSLESSTNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
              +        + P+ +  +       + +     +   + L+ AGIR  + L   K  
Sbjct: 272 HGDDRGIVLPPTIAPIQVVIVPIPKKGSEEEVYKYAKEIEEELKMAGIRVHLDL-RDKRP 330

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           G +    + +  P+ +  G  +     + +                   R  ++ +IT+ 
Sbjct: 331 GWKFYDWELKGVPVRVEVGPIDVQNSTVVL------------------ARRDKLEKITVK 372

Query: 478 ISELVSTVKKILQE 491
             ELV  V+++  +
Sbjct: 373 REELVDRVRELFDD 386



 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 19/80 (23%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        ++I   I   I    E  G   +  P L       K           V
Sbjct: 30  PVKGMNVWLPYGLKIMRNIERFIHEEMERTGHQEVLFPALIPETEFKKEAEHIAGFEGEV 89

Query: 71  FSLQDDDGQW-----ISLRY 85
           F      G       + LR 
Sbjct: 90  F-WVTHAGHEPLDVRLILRP 108


>gi|297624797|ref|YP_003706231.1| prolyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165977|gb|ADI15688.1| prolyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 484

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/235 (11%), Positives = 62/235 (26%), Gaps = 15/235 (6%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L + +E   + G         +   R          EA+
Sbjct: 160 WQEGHTAHATAEEAMAETRQMLEIYAEFAERYGALPVFRGEKTPGERFAGAQNTYTIEAM 219

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNV-PATGFSIGISRLIVAL----KSL 365
           +      +       G                 Q     T + +    +   +       
Sbjct: 220 MRDGKALQAGTSHYMGDNFARAFNITFNDVNNQQAFVHTTSWGLSWRFIGALIMTHGDDK 279

Query: 366 ESSTNNIKEMGPVLITTM------DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                       V++  +         +  L++       L+ AG+R ++      + G 
Sbjct: 280 GLILPPPLAPHQVVVVPIYRADDDAARAAVLAEVGKLHAALKDAGVRVKVDDRQGMSPGW 339

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +    +++  PL +  G  +   G   + D   G++   ++ N        + + 
Sbjct: 340 KFNEWEQKGVPLRLELGPKDLEAGAALLADRLSGEKRPVKLANLAQTLPDELERF 394


>gi|297527274|ref|YP_003669298.1| prolyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297256190|gb|ADI32399.1| prolyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 483

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 78/248 (31%), Gaps = 31/248 (12%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           + E+   ++   A          I+E +       + + +   IV+   + T    E   
Sbjct: 159 VREIMSFIEAHTAHATSEEAEKQINEALNIYKKFFDSLLLPYFIVKTPPWDTFAGAEYNY 218

Query: 312 GFPVMNEKQKPVVFGSVGGGGR---------YDGLVSRFKGQNVPATGFSIGISRLIVAL 362
            F       K +  GSV   G+         +     + K       G S      ++A+
Sbjct: 219 DFITAMPDGKGLELGSVINLGQKFARAFDIKFMDSDGKTKYVYQTCYGVSERTLGAVIAI 278

Query: 363 KSLESSTNNIKEMGPVLITTMDH----DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              +        + P+ +  +      + D +   +  ++ L  AGIR  +        G
Sbjct: 279 HGDKKGLFLPPIIAPIQVVIVPIARRDEQDIIEYARGISEKLSEAGIRTYLDDDPEHTPG 338

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +  + + +  P  I  G  E +   + I                   R     +IT+ I
Sbjct: 339 WKYYFWEMKGVPTRIEIGRRELNNNTVTI------------------ARRDGAKKITVNI 380

Query: 479 SELVSTVK 486
           +EL+  ++
Sbjct: 381 NELIDKLR 388


>gi|157413327|ref|YP_001484193.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus str. MIT 9215]
 gi|157387902|gb|ABV50607.1| possible Histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT
           9215]
          Length = 383

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 115/360 (31%), Gaps = 46/360 (12%)

Query: 37  YENYGFDPIETPLLEYSDSL-GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYV 95
           Y+ +G++ +    +   +++ G+ + +E+R    V          + LR ++T  + +  
Sbjct: 26  YKLWGYEEVSPSFINTLETIKGRGVIEENRVVGIV------SNNSLCLRPEMTTSIVKLS 79

Query: 96  AENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL 155
           +        P R +  G VF  +++    F+   +          +T   E+ ++     
Sbjct: 80  STRLINKKRPIRLFTNGMVFDKKQNNKNSFKLQEKLQSGIELIGYDTKYPEIEVINI--- 136

Query: 156 EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLL 215
                              L   ++ I L     L   +   + +D +           +
Sbjct: 137 -------------------LFDAIDNINLKDGCNLFLLVSTTKIMDLILNKYKNNNFEDI 177

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVI 275
            +   +   D      +  +   ++   L    E     + + +K T    K  ++L  +
Sbjct: 178 KKCLVNFDQDNLSKLGIDEDDKYVLKDILFTRGEPI--TILKKLKTTYGTSKTLDDLNFL 235

Query: 276 SELV-RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
            E + + S      +++  T    L  Y G V++ I                 +  GGRY
Sbjct: 236 FETLSKISKKYGVNLQLDPTFQPHLNLYEGIVFQLI--------GDDGKNKRVIAKGGRY 287

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D LV  +        G    IS   +       +  + ++     I  M  DS  L K  
Sbjct: 288 DELVRFYSPNEKILNGIGFTISLDTL------RNIISQEKTDKKKILLMFKDSYLLEKAM 341


>gi|21227490|ref|NP_633412.1| glycyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|20905865|gb|AAM31084.1| Glycyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 652

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 2/89 (2%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V +  +    +     +     LR   +        S   G + +  D    P ++   
Sbjct: 545 QVAVLPLLTRKELADPAKEIVAKLREKNLLV--NYDDSGTIGRRYRRNDEIGTPYSVTVD 602

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNES 465
                 G + I+D    +++   I   E+
Sbjct: 603 YDTLQDGTVTIRDRDSMRQIRAPISGIEN 631



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 16/49 (32%), Gaps = 1/49 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
           RGF D       ++ RI    R  Y    G   IE P +   D      
Sbjct: 58  RGFYDYGPLGSTLKRRIEQIWREFYVIQEGHMEIECPTIGIEDVFVASG 106


>gi|84624684|ref|YP_452056.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|73919845|sp|Q5GXY0|SYT_XANOR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123725509|sp|Q2P0Z5|SYT_XANOM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84368624|dbj|BAE69782.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 634

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 262 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 320 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 366



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R I  L    +       + PV +   +      
Sbjct: 494 GAEYVDENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFP-SWLAPVQVVVANITDAQA 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++  
Sbjct: 553 DYVDAVRKTLANQGFRVSADL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRT- 610

Query: 451 AKGK 454
             G+
Sbjct: 611 RSGE 614


>gi|88809590|ref|ZP_01125097.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88786340|gb|EAR17500.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 611

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/96 (11%), Positives = 31/96 (32%), Gaps = 1/96 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +    +     +     L   G+RA +     +  G  ++  ++   P+  + G  
Sbjct: 509 QVRLLPVTDEVQPYAERLLDQLTQVGVRATIDRSGDR-LGKLIRTGEQMKIPVLAVIGAK 567

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           E  +  + ++    G      + +     +   AQ 
Sbjct: 568 EAEQNAVSLRSRRDGDLGVVTMADLLRAVQNANAQR 603



 Score = 41.4 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 2/109 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I D  R  +   G++ + TP +    SL K     D   + +F  
Sbjct: 229 GLVFWHPRGARMRLLIEDFWRQAHFEGGYELLYTPHVADI-SLWKTSGHLDFYAESMFGP 287

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
              D +   L+           A    +    P R   +G V+R E+ G
Sbjct: 288 MQVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYERPG 336


>gi|309808038|ref|ZP_07701957.1| putative threonine--tRNA ligase [Lactobacillus iners LactinV
           01V1-a]
 gi|308168721|gb|EFO70820.1| putative threonine--tRNA ligase [Lactobacillus iners LactinV
           01V1-a]
          Length = 377

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 34/111 (30%), Gaps = 6/111 (5%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  + + +  G+  + TP+L   D+  K         + +F
Sbjct: 259 GLPYWMPKGATIRRVIERYIIDKEVAD--GYQHVYTPVLMNLDAY-KTSGHWAHYREDMF 315

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
              D   G+ + LR        +    +  +            +    K+ 
Sbjct: 316 PPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRSKNQ 366


>gi|296208047|ref|XP_002750943.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Callithrix jacchus]
          Length = 475

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 55/193 (28%), Gaps = 15/193 (7%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 90  LLPYTVRAMEKLVRVIDQEMQVIGGQKVNMPSLSPAE-LWQATNRWDLMGKELLRLRDRH 148

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 149 GKEYCLGPTHEEAITALIA---SQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRCREFY 205

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D+   +A+   + +C         +G++       + +         ++ +  
Sbjct: 206 MKDMYTFDSSPEAAQQTYSLVCDAYCSLFNRLGLRFVKVQANVGSIGGTMSHEFQLPMDI 265

Query: 187 DDKLNERLIVLRA 199
            +           
Sbjct: 266 GEDWLAICPSCSF 278


>gi|258644607|dbj|BAI39857.1| putative threonyl-tRNA synthetase [Oryza sativa Indica Group]
          Length = 749

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/126 (10%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+               ++ ++   S+S+   +     +  AG  
Sbjct: 624 HRAILGSVERMFAILLEHYNGKWPLWLSPRQAIVCSIS--SNSVEYAKQVRARIHEAGFH 681

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +   + +    +++ A        ++ G  E   G + ++   K +  +  I +  + 
Sbjct: 682 VAID-ETDRTIQKKVREAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITR 740

Query: 467 REARVA 472
            +  VA
Sbjct: 741 FKEEVA 746



 Score = 41.0 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N+++D +R  Y + G+  + +P + Y+  L +         + +F  + + 
Sbjct: 379 FLPHGAIIYNKLMDFLRQQYRDRGYQEVLSPNI-YNMQLWETSGHAANYKENMFVFEIEK 437

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 438 -QEFGLKPMNCPG 449


>gi|78486008|ref|YP_391933.1| threonyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123769059|sp|Q31F14|SYT_THICR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78364294|gb|ABB42259.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Thiomicrospira
           crunogena XCL-2]
          Length = 642

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/165 (10%), Positives = 46/165 (27%), Gaps = 2/165 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           EL  G A    K   +   + + +R       +  I TPL+    +L +     D+    
Sbjct: 257 ELAPGMAFWHPKGSTLYRVVENYMRQQLVENDYQEIRTPLIMDR-TLWEKSGHWDKFKDN 315

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +F+ + ++ +  +++        +    N  +            +    +          
Sbjct: 316 MFTTETEN-RDYAVKPMNCPGHIQVYNHNLSSYRDLPIRLAEFGLVHRNEPSGTLHGLMR 374

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKI 174
                   +       ++   +   ++ V     D+       K 
Sbjct: 375 VRSFTQDDAHIFCTPEQIKEEVQACIDLVFNTYADFGFDNIQVKF 419



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 33/84 (39%), Gaps = 4/84 (4%)

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  +     V+ +  D  ++ ++    + + L+  G R E  L  ++  G +++  
Sbjct: 531 EGKFPTWLAPTQLVIASIADVHNEYVND---FAKKLKKHGFRVESDL-RNEKVGFKIREH 586

Query: 425 DRRNCPLAIIQGTGERSRGMLQIK 448
             +  P  ++ G  E   G + ++
Sbjct: 587 TLQRVPYILVVGDQEMENGTVNVR 610


>gi|255320540|ref|ZP_05361720.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262379097|ref|ZP_06072253.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302390|gb|EET81627.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298554|gb|EEY86467.1| prolyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 571

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 41/160 (25%), Gaps = 8/160 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+ N++   +R      G      P+ + + SL +      + 
Sbjct: 31  MIRKLASGLYTWLPMGVRVLNKVEAIVREEMNRAGALETFMPVTQPA-SLWEESGRYVQY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK---- 119
              +    D       L     ++   LAR   +++  +       +             
Sbjct: 90  GPELLRFNDRHTNPFVLGPTHEEVITDLARNELKSYKQLPINFYQIQTKFRDEVRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                F            +S +     M          +G
Sbjct: 150 MRSREFIMKDAYSFHVDQASLQETYDVMYETYCRIFSRLG 189


>gi|50543472|ref|XP_499902.1| YALI0A09427p [Yarrowia lipolytica]
 gi|49645767|emb|CAG83829.1| YALI0A09427p [Yarrowia lipolytica]
          Length = 461

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/446 (11%), Positives = 113/446 (25%), Gaps = 76/446 (17%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E P G A       RI +R+ + +R     +GF  I +P++ Y +SL K     ++ 
Sbjct: 59  ISPESP-GSAFFLPHGQRIYSRLGEFMRLQLRVFGFQEISSPIM-YKNSLWKQSGHWEKF 116

Query: 67  NKGVFSLQDDD-----GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
              +F +Q         +  SL+             +        +        R     
Sbjct: 117 QDDMFRVQPGHEETSVEEEFSLKPMNCPG-------HCLLFNS-LKRSYRELPLRYSDFS 168

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
           P    +                D        + +E+   +         N   L+     
Sbjct: 169 PLHRNEASGALSGLTRVRRFHQDDGHIFCTPEQVESEISRALKLVQQTYNTFGLEISRVV 228

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
           +    +             D       +     + +  + + G +   A   +     + 
Sbjct: 229 LSTRPE---------TFIGDIEQWNDAEKALTSVLDSWSVSKGKWELNAGDGAFYGPKID 279

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
             +     K        +               + E  +   ++++       +V    Y
Sbjct: 280 ILVKDKHGKEHQTATTQLD------------FQLPERFQLKYFDASETAQRPVMVHRAVY 327

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
            +   + AIL                    G++   +S  +   +P        +  + A
Sbjct: 328 GSLERFLAILIDH---------------YEGKWPLWLSPRQCMVLPVGEAQNEFAEKVAA 372

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
              L    +   +  P+  +T+  D D+ S+                      +      
Sbjct: 373 --QLSGLPSITDQSTPLSASTLFCDVDTRSETL-------------------GQKIK--- 408

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI 447
             A         + G  E   G + +
Sbjct: 409 -QARNEGYSYIAVIGDKEMQEGKVTV 433


>gi|282854107|ref|ZP_06263444.1| glycine--tRNA ligase [Propionibacterium acnes J139]
 gi|282583560|gb|EFB88940.1| glycine--tRNA ligase [Propionibacterium acnes J139]
          Length = 481

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +SD   K +     LR      +     ++  G + +  D    P  I      
Sbjct: 390 VLPLSRNSDLSPKARDLAARLREH-WNVDFD--DAQAIGKRYRRQDEIGTPFCITVDFDS 446

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++     +    I   E +   R
Sbjct: 447 LEDDAVTVRERDTMAQQRVSIDKVEEYLGGR 477


>gi|167005199|ref|ZP_02270957.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 568

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 34  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 88

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 89  FGKELLRFKDRKKNEFVLGP 108



 Score = 37.9 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 75/283 (26%), Gaps = 31/283 (10%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-VKGTIAGEKGFNE 271
             +      ++ +    +    E+  ++  F+     K +    +  ++       G NE
Sbjct: 306 QEIKAQNACSALELVDASEEELEKAGLVAGFIGFVGLKDIDFYIDFELENEKQMIMGANE 365

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
                  +     N +R K    ++   E        A L      E       G     
Sbjct: 366 KDYHLIGIDVVNLNKDRFK---DLIEVKEGDCCVKCGAKLKQSKGIEVGHIFKLGQKYSK 422

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMD- 384
                 +           G        ++A+             N       + I   + 
Sbjct: 423 AMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCIWNKTLAPFVLEIIVSNL 482

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D  +L       + L   G+   +   + + FG ++   +    P A++ G G      
Sbjct: 483 KDEKALEFANKLYEDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVIGKG-LENNE 540

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           +++           + ++             I   EL+  +KK
Sbjct: 541 IEL----------IQREDLVKEL--------IKTDELMEILKK 565


>gi|325919878|ref|ZP_08181868.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           gardneri ATCC 19865]
 gi|325549662|gb|EGD20526.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           gardneri ATCC 19865]
          Length = 634

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 262 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 320 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 366


>gi|289661762|ref|ZP_06483343.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 636

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 264 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 322 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 368



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 3/124 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R I  L    +       + PV +  ++      
Sbjct: 496 GAEYVDENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFP-SWLAPVQVVVVNITDAQA 554

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++  
Sbjct: 555 EYVDSVRKTLANQGFRVSADL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRT- 612

Query: 451 AKGK 454
             G+
Sbjct: 613 RSGE 616


>gi|121612398|ref|YP_001000243.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|152016593|sp|A1VYQ2|SYP_CAMJJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|87250412|gb|EAQ73370.1| prolyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 569

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I + ++   +  G   +     TP      SL +     + 
Sbjct: 35  QIGSGLYNFLPLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPA-----SLWQESGRYNV 89

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D       L  
Sbjct: 90  FGKELLRFKDRKKNEFVLGP 109



 Score = 37.9 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 75/283 (26%), Gaps = 31/283 (10%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-VKGTIAGEKGFNE 271
             +      ++ +    +    E+  ++  F+     K +    +  ++       G NE
Sbjct: 307 QEIKAQNACSALELVDASEEELEKAGLVAGFIGFVGLKDIDFYIDFELENEKQMIMGANE 366

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
                  +     N +R K    ++   E        A L      E       G     
Sbjct: 367 KDYHLIGIDVVNLNKDRFK---DLIEVKEGDCCVKCGAKLKQSKGIEVGHIFKLGQKYSK 423

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMD- 384
                 +           G        ++A+             N       + I   + 
Sbjct: 424 AMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEANHDEKGCIWNKTLAPFVLEIIVSNL 483

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D  +L       + L   G+   +   + + FG ++   +    P A++ G G      
Sbjct: 484 KDEKALEFANKLYEDLTNLGLEVLLDDRNER-FGVKMNDFELMGFPYALVIGKG-LENNE 541

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           +++           + ++             I   EL+  +KK
Sbjct: 542 IEL----------IQREDLVKEL--------IKTDELMEILKK 566


>gi|325917697|ref|ZP_08179888.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325536091|gb|EGD07896.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 634

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 262 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 320 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 366



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R I  L    +       + PV +   +      
Sbjct: 494 GAEYVDENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFP-SWLAPVQVVVANITDAQA 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++  
Sbjct: 553 DYVDSVRKTLANQGFRVNADL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRT- 610

Query: 451 AKGK 454
             G+
Sbjct: 611 RSGE 614


>gi|282162818|ref|YP_003355203.1| glycyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155132|dbj|BAI60220.1| glycyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 580

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 28/93 (30%), Gaps = 2/93 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K +     L+  G   E     S   G + +  D    P +I      
Sbjct: 475 VLPLLSKEPLAGKARAIALDLKEKGFFIE--YDESGTIGKRYRRNDEVGTPFSITIDFDT 532

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                + I+D     ++   +K+  S     +A
Sbjct: 533 MEDDTVTIRDRDTMSQVRVPVKDLSSVLGELLA 565



 Score = 37.9 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 1/49 (2%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
           GF D       ++ +I D+ R +Y    GF  IE P +          
Sbjct: 28 SGFYDYGPMGATLKRKIEDAWRRLYCVGEGFYEIEAPTIGVEAIFEASG 76


>gi|254431853|ref|ZP_05045556.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626306|gb|EDY38865.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 575

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +    +     +     L+ AG+RA +     +  G  ++  ++   P+  + G  
Sbjct: 469 QIRLLPVTDEVRPYAEELLGQLKGAGVRASVDHSGDR-LGKLIRNGEQMKIPVLGVIGAK 527

Query: 439 ERSRGMLQIKDLAKGK 454
           E   G + ++    G 
Sbjct: 528 EAETGSVSLRSRRDGD 543



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 16/116 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      +  R+R  I +  R  +   G++ + TP +  +D  L K     D  ++ +F 
Sbjct: 189 GLVFWHPRGARMRLEIENFWREAHFAAGYELLYTPHV--ADIGLWKTSGHLDFYSESMFG 246

Query: 73  LQDDDGQWISLRYD------LT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
               D +   L+        LT A   R           P R   +G V+R E+ G
Sbjct: 247 PMQVDEREYQLKPMNCPFHVLTYASTLRSY------RELPIRWAELGTVYRYERPG 296


>gi|21243325|ref|NP_642907.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|25453288|sp|Q8PJE1|SYT_XANAC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21108867|gb|AAM37443.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 634

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 262 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 320 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 366



 Score = 38.3 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R I  L    +       + PV +   +      
Sbjct: 494 GAEYVDENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFP-SWLAPVQVVVANITDAQA 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++  
Sbjct: 553 EYVDSVRKTLANQGFRVSADL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRT- 610

Query: 451 AKGK 454
             G+
Sbjct: 611 RSGE 614


>gi|21231898|ref|NP_637815.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767974|ref|YP_242736.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991100|ref|YP_001903110.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|25453287|sp|Q8P7Z2|SYT_XANCP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|81306049|sp|Q4UW57|SYT_XANC8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229558465|sp|B0RRG9|SYT_XANCB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21113622|gb|AAM41739.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573306|gb|AAY48716.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167732860|emb|CAP51054.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 636

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 264 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 322 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 368


>gi|294667581|ref|ZP_06732796.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292602701|gb|EFF46137.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 634

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 262 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 320 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 366


>gi|255527265|ref|ZP_05394146.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509050|gb|EET85409.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 556

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              ++     ++I  +  + + +   +     L++ GI   +     +  G + K AD  
Sbjct: 452 WPKSVAPYEVIVIAAVFKNEEQMKTAENIYNKLKSLGIDVLLDDRDERA-GVKFKDADLI 510

Query: 428 NCPLAIIQGTGERSRGMLQIK 448
             P+ I  G    S G ++ K
Sbjct: 511 GAPIRITVGKR-ISDGKVEFK 530


>gi|166711588|ref|ZP_02242795.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 634

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 262 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 320 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 366



 Score = 38.3 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 37/127 (29%), Gaps = 9/127 (7%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R I  L    +       + PV +   +      
Sbjct: 494 GAEYVDENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFP-SWLAPVQVVVANITDAQA 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                  + L   G R    L + K        +     +  P  ++ G  E+  G + +
Sbjct: 553 DYVDAVRKTLANQGFRVSADLRNEKIGYKIREHM----LQRVPYLLVVGDREKENGAVAV 608

Query: 448 KDLAKGK 454
           +    G+
Sbjct: 609 RT-RSGE 614


>gi|165932872|ref|YP_001649661.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|165907959|gb|ABY72255.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 644

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/382 (9%), Positives = 94/382 (24%), Gaps = 10/382 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           +F         +                ++  +     V        +    +       
Sbjct: 263 HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASGHWEKFR 322

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D + A+        +   N      I ++      D                   L G+ 
Sbjct: 323 DDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGL- 381

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +T E +        +  +    ++            G NE+
Sbjct: 382 MRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEIRAGSNEV 441

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E   K          +     G  Y     +  +        +   +    V    
Sbjct: 442 WDKAENALKEAVEQAGFTYTLNPGEGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLPER 500

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                V+    +  P       +G     + +   E +      + PV +      SD  
Sbjct: 501 LDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWLAPVQVAIATITSDLN 560

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G+R +  +   K    +++    +  P+  + G  E+    + I+ L
Sbjct: 561 DYALEVQKALIDNGVRTDFNISPDK-INYKIREFSNQKIPMIAVIGKQEQENKQVAIRRL 619

Query: 451 AKGKELSREIKNNESWREARVA 472
               +    ++   +  +    
Sbjct: 620 GTTDQEVLSVEQLIAVVKEENE 641



 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +     ++    +F+L
Sbjct: 270 GMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK-SLWEASGHWEKFRDDMFAL 328

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 329 ET-DDKTLALKPMNCP 343


>gi|50310653|ref|XP_455348.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644484|emb|CAG98056.1| KLLA0F05918p [Kluyveromyces lactis]
          Length = 744

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D +R+ Y   G+D + TP + Y+  L +         + +FS + + 
Sbjct: 361 WLPHGTRIYNTLVDLLRSEYRKRGYDEVITPNM-YNSKLWETSGHWANYKENMFSFEVEK 419

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 420 -ETFGLKPMNCPG 431



 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 38/372 (10%), Positives = 103/372 (27%), Gaps = 34/372 (9%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           N+ +S     +       + + +  +++  + +   N      + +       +      
Sbjct: 392 NMYNSKLWETSGHWANYKENMFSFEVEKETFGLKPMNCPGHCLMFKARERSYRELPWRVA 451

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+   +   + D++  F     + +E  +I      +        
Sbjct: 452 DFGVIHRNEFSGALSGLTR-VRRFQQDDAHIFCTQDQIENEIANIFDFLKYVYGVFGFEF 510

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             EL   +   EK   EL   +    K      +   +  +  G   + G   + ++   
Sbjct: 511 KMEL---STRPEKYVGELETWNNAESKLETALKKWGGNWELNPGDGAFYGPKIDIMISDA 567

Query: 315 VMNEKQKPVVFGSVGGGGRYD-----GLVSRFKGQNVPAT--GFSIGISRLIVALKSLES 367
           +    Q   +        R++       +        P       +G    + A+ +   
Sbjct: 568 LKRWHQCATIQLDFQLPNRFELEFKTKELEGSDNYERPVMIHRAILGSVERMTAILTEHF 627

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN----QLKY 423
           +      + P  I  +          Q     +  AG  A++ L  +         Q+  
Sbjct: 628 AGKWPFWLSPRQILVVPVGVKFQEYAQEVRDKMVEAGFYADVDLTGNTLQKKVRNGQM-- 685

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
                     I G  E +   + I++                  + +    T+ +  +++
Sbjct: 686 ---LKYNFIFIVGEQEMTEKSVNIRNR--------------DVMDLQGKNATVQVDAVIN 728

Query: 484 TVKKILQENKEE 495
            + K+ +E + +
Sbjct: 729 QLSKLKEEKRAD 740


>gi|78048351|ref|YP_364526.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325927169|ref|ZP_08188432.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           perforans 91-118]
 gi|123743902|sp|Q3BRT7|SYT_XANC5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78036781|emb|CAJ24474.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325542482|gb|EGD13961.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas
           perforans 91-118]
          Length = 634

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 262 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 320 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 366



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y    S+ K   +        + R I  L    +       + PV +   +      
Sbjct: 494 GAEYVDENSQKKHPVMLHRAIVGSMERFIGILIEHHAGAFP-SWLAPVQVVVANITDAQA 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G R    L  ++  G +++    +  P  ++ G  E+  G + ++  
Sbjct: 553 EYVDSVRKTLANQGFRVSADL-RNEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRT- 610

Query: 451 AKGK 454
             G+
Sbjct: 611 RSGE 614


>gi|113475053|ref|YP_721114.1| prolyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|123161090|sp|Q116D3|SYP_TRIEI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110166101|gb|ABG50641.1| prolyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 601

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--VF 71
           G        +R+ N++   +R      G      P L+ ++   +    +        +F
Sbjct: 38  GIYAYLPLMLRVINKVSTIVREEMNATGAQECLLPQLQPAELWQESGRWDTYTQAEGIMF 97

Query: 72  SLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           SL D   + + L     ++   +A+ +  ++  +       +  
Sbjct: 98  SLIDRQNRELGLGPTHEEVITTIAKDIIRSYRQLPIHLYQLQTK 141



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 13/118 (11%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     V+      D+  +       + L  AGI   +     +  G + K AD 
Sbjct: 494 IWPVAIAPYHVVICIPNIKDTQQIEVAGNLYKELNEAGIDTILDDRDERA-GVKFKDADL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
              P  I+ G      G +++ + +  +            +E  VAQ+   + +L+  
Sbjct: 553 IGIPYRIVTGRS-LKSGKVELIERSTHQ-----------CQEIVVAQVLSTLKDLIEK 598


>gi|323481345|gb|ADX80784.1| prolyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 572

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E      +  P L  ++ L K     +     ++ L
Sbjct: 38  GIYSYLPLANRVLEKLKAIMREEFEKIDAVEMLMPALLPAE-LWKESGRYETYGPNLYRL 96

Query: 74  QDDDGQWISLRY 85
           +D + +   L  
Sbjct: 97  KDRNDRDYILGP 108



 Score = 41.0 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +         + +  M+   +  +K  Q    M+  AG    +   + +  G + 
Sbjct: 458 DERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             AD   CP+ I  G      G++++K    G+ L    +  ES
Sbjct: 517 ADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELES 559


>gi|193203271|ref|NP_001122525.1| Prolyl tRNA Synthetase family member (prs-2) [Caenorhabditis
           elegans]
 gi|148472914|emb|CAN86903.1| C. elegans protein T27F6.5d, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 138

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 1/83 (1%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  +        +GF        R+ +++   +   ++N G   I  P++  +  L +  
Sbjct: 25  MLVENGFILPTAKGFYSLLPLGQRVIDKLCRILDVEFQNSGALKIAMPIV-GTQQLWEKT 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISL 83
              +     +    D     + L
Sbjct: 84  GRWEAMGPEMIRFHDRQQNHMCL 106


>gi|315282168|ref|ZP_07870635.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313614185|gb|EFR87862.1| prolyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 252

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I      LI       + ++  +     L+ AG    +   + +  G +   AD  
Sbjct: 148 WDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQGAGFSVLIDDRAERA-GVKFADADLI 206

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P+ I  G    + G++++K    G+ +       
Sbjct: 207 GLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDEL 241


>gi|296187244|ref|ZP_06855640.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048115|gb|EFG87553.1| prolyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 556

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              ++     ++I  +  + + +   +     L++ GI   +     +  G + K AD  
Sbjct: 452 WPKSVAPYEVIVIAAVFKNEEQMKTAENIYNKLKSLGIDVLLDDRDERA-GVKFKDADLI 510

Query: 428 NCPLAIIQGTGERSRGMLQIK 448
             P+ I  G    S G ++ K
Sbjct: 511 GAPIRITVGKR-ISDGKVEFK 530


>gi|153808043|ref|ZP_01960711.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185]
 gi|149129652|gb|EDM20866.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185]
          Length = 646

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 46/135 (34%), Gaps = 3/135 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++              V+I  +    +  ++     
Sbjct: 509 NQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPEQVVILPISEKFNDYAEQVKMY 568

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+T  IRA +    ++  G +++  + +  P  +I G  E   G + ++   +G + +
Sbjct: 569 --LKTHEIRAIVD-DRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGT 625

Query: 458 REIKNNESWREARVA 472
            + +         V 
Sbjct: 626 MKFEEFAKILNEEVQ 640



 Score = 36.7 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETP 48
           +G      K   +R R+ D +R I   Y +  + TP
Sbjct: 261 KGLPMWLPKGTALRLRLQDFLRRIQTRYDYQEVITP 296


>gi|124516423|gb|EAY57931.1| Threonyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 617

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  +IR  + +  + +++ +G+  + TP +   D   +     D     +F  
Sbjct: 234 GLVLWLPRGSQIRRTLEELWKILHDRHGYRYVYTPHIARLDLWMQS-GHWDYYQDSMFRP 292

Query: 74  QDDDGQWISLRYDLTA 89
            + +G    L+     
Sbjct: 293 METEGTAYELKPMNCP 308



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 6/137 (4%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +      +   +    F        + ++    +         V I T+      +   Q
Sbjct: 472 NDSGEPCRPIMIHRALFGSIERFFGILIEHYAGAFPLWLAPEQVRIMTIA--DRHIPYAQ 529

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                L+  G+RAE     ++  G +++ A     P   + G  E     + ++     +
Sbjct: 530 TVLNRLKDRGVRAEGDF-RNEKIGFKVREAQMAKIPEMWVVGDREVEENRVSVR---TRE 585

Query: 455 ELSREIKNNESWREARV 471
              ++++  ES  E   
Sbjct: 586 GEKKDLRPLESELEDLF 602


>gi|89053437|ref|YP_508888.1| ATP phosphoribosyltransferase regulatory subunit [Jannaschia sp.
           CCS1]
 gi|88862986|gb|ABD53863.1| ATP phosphoribosyltransferase regulatory subunit [Jannaschia sp.
           CCS1]
          Length = 369

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 107/364 (29%), Gaps = 58/364 (15%)

Query: 42  FDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT 101
             P++ P+L  +++L     ++ R     F+  D D   + LR D T P+   V  +   
Sbjct: 21  AVPVDAPMLVSAETLLDLYGEDIRARA--FTTHDPDRGELMLRPDFTVPV---VEMHMIA 75

Query: 102 IVF----PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETA-------------- 143
                  P R   +G VFR +  G     +++Q   +    SA                 
Sbjct: 76  TEQGGAEPARYTYLGEVFRMQHAGADLPSEYLQVGYEVFDRSAPLQADAEVFALFSQALA 135

Query: 144 ---------DAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI------------ 182
                    D  + +     LE    ++      +   +    +L++             
Sbjct: 136 DVPTRAVTGDIGVLLAAIAALETTDARKAALRRHVWRPRRFRALLDRFTGAVPAPQGRDA 195

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
            L          ++ +A   +       +   L     D + D      +   Q D++  
Sbjct: 196 YLSATRDQGLAAMIAQAGPPIGLRTTDEMTARLQRLEDDAAAD-----PIDPAQADVLSD 250

Query: 243 FLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            L++     +++  L          E     +   ++ +  +G   + +    +  R   
Sbjct: 251 LLALKAPLGEAVDILANFTVDLPGLEGAVARVADRTKALANTGIAVDALPFEVSYGR--- 307

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
                  E   GF        P       GG           G+ +PA G  I    ++ 
Sbjct: 308 ----TQMEYYDGFVFGILSATPGHPPLATGGRYDALTRQLGGGREIPAVGGVIRPELVLT 363

Query: 361 ALKS 364
           A ++
Sbjct: 364 AKEA 367


>gi|119357673|ref|YP_912317.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|152016595|sp|A1BHL6|SYP_CHLPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119355022|gb|ABL65893.1| prolyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 481

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 65/246 (26%), Gaps = 21/246 (8%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    + V              I   +   +          EA+
Sbjct: 156 WQEGHTAHATPEESQEEVVRMINVYKTFAENYMALPVIIGKKTDSEKFAGAVDTWCIEAM 215

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G            +R    +          +RLI AL        
Sbjct: 216 MQDSKALQAGTSHNLGQNFAKAFDCQFQTRDGKLDYVWATSWGVSTRLIGALIMAHSDDR 275

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                       V+I  +     +    K    ++ L   GI A +      + G +   
Sbjct: 276 GLVLPPKLATRQVVIIPILKGDKAAVCEKAHAISRTLSANGIPAFVDDSEQNSPGWKFAE 335

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  PL I  G  +   G   +      ++    + +  S          + ISE+++
Sbjct: 336 YELQGIPLRIELGPRDIQNGTCIVARRDTLEKTELALDDTLS----------VSISEILN 385

Query: 484 TVKKIL 489
            +++ L
Sbjct: 386 AIQQNL 391


>gi|260170790|ref|ZP_05757202.1| threonyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315919124|ref|ZP_07915364.1| threonyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313692999|gb|EFS29834.1| threonyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 646

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/461 (10%), Positives = 114/461 (24%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +                           
Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEV--------------------------- 293

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                         +T P+                    G   +  K          + +
Sbjct: 294 --------------ITPPI-----------GNKLLYVTSGHYAKYGKDAFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +         E+      + + + ++  ++           G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEF-----------GTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D       + VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMDFQNFEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            + +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DDNWEKAEQAIIEACAEKGLPAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   E +              D    R    +    G    + R +  L    +    
Sbjct: 495 NLPERFELEYMGS----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 541

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +          +     L+   IRA +    ++  G +++  + +  P 
Sbjct: 542 LW-LTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVD-DRNEKIGRKIRDNEMKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +I G  E   G + ++   +G + + + +         V 
Sbjct: 600 MLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEEVQ 640


>gi|160883804|ref|ZP_02064807.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483]
 gi|237722137|ref|ZP_04552618.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|299149166|ref|ZP_07042227.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|156110889|gb|EDO12634.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483]
 gi|229447947|gb|EEO53738.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|298512833|gb|EFI36721.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 646

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/461 (10%), Positives = 114/461 (24%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +                           
Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEV--------------------------- 293

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                         +T P+                    G   +  K          + +
Sbjct: 294 --------------ITPPI-----------GNKLLYVTSGHYAKYGKDAFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +         E+      + + + ++  ++           G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEF-----------GTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D       + VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMDFQNFEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            + +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DDNWEKAEQAIIEACAEKGLPAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   E +              D    R    +    G    + R +  L    +    
Sbjct: 495 NLPERFELEYMGS----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 541

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +          +     L+   IRA +    ++  G +++  + +  P 
Sbjct: 542 LW-LTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVD-DRNEKIGRKIRDNEMKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +I G  E   G + ++   +G + + + +         V 
Sbjct: 600 MLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEEVQ 640


>gi|153854756|ref|ZP_01995990.1| hypothetical protein DORLON_01988 [Dorea longicatena DSM 13814]
 gi|149752663|gb|EDM62594.1| hypothetical protein DORLON_01988 [Dorea longicatena DSM 13814]
          Length = 479

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
             ++  +   +I    H    L +       L+ AG R ++   S K+ G +    +   
Sbjct: 285 PPHVAPVECRIIPIAQHKEGVLDRSYALLDELKKAGYRVKID-DSDKSTGWKFSEQEILG 343

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            P  I  G  +  +  + +                   R     +I + + E+   +++I
Sbjct: 344 IPTRIEIGPKDIEKNQVVV------------------VRRDNREKIVVSLDEIAVKLREI 385

Query: 489 LQENKEEI 496
           L++ ++++
Sbjct: 386 LEQEQQDM 393


>gi|332971649|gb|EGK10599.1| threonine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 637

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 32/113 (28%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   I   +R      G+  ++TP +    +  +           +F L
Sbjct: 262 GMVFWHPRGWALWQVIEQHMRRELTEAGYQEVKTPQVMDK-TFWEKSGHWANYKDNMF-L 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +    +        P R    G   RNE  G   
Sbjct: 320 TSSEKREYAVKPMNCPGHVQIF-NHGLRSYRDLPMRLAEFGSCHRNEPSGALH 371



 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 42/121 (34%), Gaps = 20/121 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+         +     L+ AG R ++ +  ++  G +++       P  +
Sbjct: 536 WLAPVQMVVMNITEKQADYAKEVQAKLQAAGFRVDLDI-RNEKIGYKIRSNSEMRYPYQL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
             G  E   G + I+                   +      ++ + E ++ ++  L++  
Sbjct: 595 TVGDKEMENGQVSIR-------------------KKADNLGSVSVDEFIAMLQDELKQAV 635

Query: 494 E 494
           E
Sbjct: 636 E 636


>gi|311259273|ref|XP_003128020.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 472

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 36/111 (32%), Gaps = 8/111 (7%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  +    +  G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 87  LLPYTVRAMEKLVRVVDQEMQAIGGQKVNMPSLSPAE-LWRATSRWDSMGKELLRLRDRH 145

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           G+   L    +  +TA +A   ++   +                ++  P  
Sbjct: 146 GKEYCLGPTHEEAITALVA---SQKTLSYKQLPVLLYQVTRKFRDEPRPRF 193


>gi|262043503|ref|ZP_06016623.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039149|gb|EEW40300.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 530

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   I   ++  +R+ +E  G+  + TP +    SL +     D     +F+ 
Sbjct: 273 GAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDVMDR-SLWEISGHWDNYRDHMFTT 331

Query: 74  QDDDGQWISLRYDLTAPLA 92
           Q +DG+  +L+        
Sbjct: 332 QTEDGRNFALKPMNCPGAV 350


>gi|238650420|ref|YP_002916272.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259516667|sp|C4K0X3|SYT_RICPU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238624518|gb|ACR47224.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 635

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/382 (9%), Positives = 94/382 (24%), Gaps = 10/382 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           +F         +                ++  +     V        +    +       
Sbjct: 254 HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASGHWEKFR 313

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D + A+        +   N      I ++      D                   L G+ 
Sbjct: 314 DDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGL- 372

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +T E +        +  +    ++            G NE+
Sbjct: 373 MRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEIRAGSNEV 432

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E   K          +     G  Y     +  +        +   +    V    
Sbjct: 433 WDKAENALKEAVEQAGFTYTLNPGEGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLPER 491

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                V+    +  P       +G     + +   E +      + PV +      SD  
Sbjct: 492 LDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWLAPVQVAIATITSDLN 551

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G+R +  +   K    +++    +  P+  + G  E+    + I+ L
Sbjct: 552 DYALEVQKALIDNGVRTDFNISPDK-INYKIREFSNQKIPMIAVIGKQEQKNKQVAIRRL 610

Query: 451 AKGKELSREIKNNESWREARVA 472
               +    ++   +  +    
Sbjct: 611 GTTDQEVLSVEQLIAVVKEENE 632



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +     ++    +F+L
Sbjct: 261 GMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK-SLWEASGHWEKFRDDMFAL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 320 ET-DDKTLALKPMNCP 334


>gi|237716078|ref|ZP_04546559.1| threonyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262407690|ref|ZP_06084238.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294643798|ref|ZP_06721596.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294808458|ref|ZP_06767211.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229443725|gb|EEO49516.1| threonyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262354498|gb|EEZ03590.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292640887|gb|EFF59107.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294444386|gb|EFG13100.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 646

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/461 (10%), Positives = 114/461 (24%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +                           
Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEV--------------------------- 293

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                         +T P+                    G   +  K          + +
Sbjct: 294 --------------ITPPI-----------GNKLLYVTSGHYAKYGKDAFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +         E+      + + + ++  ++           G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEF-----------GTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D       + VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMDFQNFEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            + +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DDNWEKAEQAIIEACAEKGLPAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   E +              D    R    +    G    + R +  L    +    
Sbjct: 495 NLPERFELEYMGS----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 541

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +          +     L+   IRA +    ++  G +++  + +  P 
Sbjct: 542 LW-LTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVD-DRNEKIGRKIRDNEMKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +I G  E   G + ++   +G + + + +         V 
Sbjct: 600 MLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEEVQ 640


>gi|226330398|ref|ZP_03805916.1| hypothetical protein PROPEN_04316 [Proteus penneri ATCC 35198]
 gi|225201193|gb|EEG83547.1| hypothetical protein PROPEN_04316 [Proteus penneri ATCC 35198]
          Length = 238

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 6/102 (5%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M+         Q   + L+ AGIRA+  L  ++  G +++    R  P  ++ G  
Sbjct: 137 QVVVMNITDGQADYVQKLVKELQDAGIRAKADL-RNEKIGFKIREHTLRRVPYMLVCGDK 195

Query: 439 ERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           E   G + +     KDL        + K  +  R   + Q+ 
Sbjct: 196 EVESGKVAVRTRRGKDLGSIDVNEFKEKLLQEIRSRSLHQLE 237


>gi|222640294|gb|EEE68426.1| hypothetical protein OsJ_26793 [Oryza sativa Japonica Group]
          Length = 701

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/126 (10%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+               ++ ++   S+S+   +     +  AG  
Sbjct: 576 HRAILGSVERMFAILLEHYNGKWPLWLSPRQAIVCSIS--SNSVEYAKQVRARIHEAGFH 633

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +   + +    +++ A        ++ G  E   G + ++   K +  +  I +  + 
Sbjct: 634 VAID-ETDRTIQKKVREAQLAQFNYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITR 692

Query: 467 REARVA 472
            +  VA
Sbjct: 693 FKEEVA 698



 Score = 41.0 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N+++D +R  Y + G+  + +P + Y+  L +         + +F  + + 
Sbjct: 331 FLPHGAIIYNKLMDFLRQQYRDRGYQEVLSPNI-YNMQLWETSGHAANYKENMFVFEIEK 389

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 390 -QEFGLKPMNCPG 401


>gi|160880206|ref|YP_001559174.1| glycyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160428872|gb|ABX42435.1| glycyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 456

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 3/78 (3%)

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
            K     Q+LR   +        S   G + +  D    P A+        +G++ I+D 
Sbjct: 377 EKATEVYQLLRKHMMA---SYDESGTIGKRYRRGDAIGTPYAVTIDDETLEKGLITIRDR 433

Query: 451 AKGKELSREIKNNESWRE 468
              ++    ++N      
Sbjct: 434 DTMEQKVVALENVLEELR 451


>gi|15835287|ref|NP_297046.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285461|ref|ZP_06194855.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289472|ref|ZP_06195774.1| prolyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336858|ref|ZP_07225060.1| prolyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13633968|sp|Q9PK01|SYP_CHLMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|7190706|gb|AAF39493.1| prolyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 579

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 1/78 (1%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL-PDEDRPN 67
            +  +G         R+  ++ + IR      G   +  PLL+ ++   K    +     
Sbjct: 33  FKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQSAELWQKTGRWEAFLSE 92

Query: 68  KGVFSLQDDDGQWISLRY 85
           K ++ L+D + + + L  
Sbjct: 93  KLLYVLKDRENKEMCLAP 110



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 3/141 (2%)

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-KSLESSTNNIKEMGPVLITTMDH 385
               G + +    +         G    ++  I  L  S             + I     
Sbjct: 424 CFSVGFQDENGEKQLCWMGTYGIGVGRTLAACIEQLADSKGIVWPLAVAPFSITILYNGG 483

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           D++  +    + Q L TAG    +   + +  G +LK +D    P  +I G   +  GML
Sbjct: 484 DTEGEAVASQFYQSLNTAGFEPLLDDRNER-LGFKLKDSDLLGIPYKLIIGKSFQKTGML 542

Query: 446 QIKDLAKGKELSREIKNNESW 466
           +I+    G++ +   +N   W
Sbjct: 543 EIES-RSGEKYNISPENLLDW 562


>gi|309364909|emb|CAP23504.2| CBR-TARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 729

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G A    K   I N+++D IR  Y   GF  + TP + Y+  L +        ++ 
Sbjct: 340 QLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNM-YNKKLWETSGHWQHYSED 398

Query: 70  VFSLQDDDGQWISLRYDLTAP 90
           +F ++ +  +   L+      
Sbjct: 399 MFKIEVEK-EEFGLKPMNCPG 418



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/155 (9%), Positives = 40/155 (25%), Gaps = 20/155 (12%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           +D    + +   +             +  +S               I T+          
Sbjct: 580 FDEKGEKQRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITVH--ESVRDYA 637

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + +  AG   E           Q++ +        ++ G  E+  G + ++     
Sbjct: 638 KDVKKQIFDAGFEVEYDEFCGDTMNKQVRNSQLAQFNFILVLGAKEKENGTVNVR----- 692

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                              +  +PI +L+S  ++ 
Sbjct: 693 -------------TRDNAVRGEVPIEKLLSKFRRF 714


>gi|297664845|ref|XP_002810834.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Pongo abelii]
          Length = 436

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 47/153 (30%), Gaps = 15/153 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 90  LLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLNPAE-LWQATNRWDLMGKELLRLRDRH 148

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR-------FR 126
           G+   L    +  +TA +A   ++   +                ++  P         F 
Sbjct: 149 GKEYCLGPTHEEAITALIA---SQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFY 205

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                  D+   +A+   + +C         +G
Sbjct: 206 MKDMYTFDSSPEAAQQTYSLVCDAYCSLFNRLG 238


>gi|289208097|ref|YP_003460163.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943728|gb|ADC71427.1| threonyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 638

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 2/85 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV    +          +  T+ LR  G R E  L  ++  G +++    +  
Sbjct: 533 HFPTWLAPVQAEVLTITERQDDYAREVTRALRDKGFRVESDL-RNEKIGFKIREHTLKRV 591

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGK 454
           P  ++ G  E   G + ++    G+
Sbjct: 592 PYLLVLGDKEMENGQVAVRT-RSGE 615



 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  RIR  I     +++E  G+D + +P +   + L K     D   + ++  
Sbjct: 262 GLVFWHPKGARIRREIEKYWYDMHEKAGYDFVVSPHIANLE-LWKTSGHADFYAESMYEP 320

Query: 74  QDDDGQWISLRYDLTA 89
            +D+ Q   L+     
Sbjct: 321 MEDEHQAFQLKPMNCP 336


>gi|183220295|ref|YP_001838291.1| glycyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|167778717|gb|ABZ97015.1| Glycyl-tRNA synthetase (Glycine--tRNA ligase; GlyRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 494

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 3/97 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V I  +       +K +     LR       +    S   G + +  D    P  I
Sbjct: 399 SPMKVAIFPLMKKDGLDAKAKEIYTDLRNHWY---VDYDDSGAIGKRYRRHDEIGTPFCI 455

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  S G + I++    K+    + + +S+   R
Sbjct: 456 TVDYDTMSDGTVTIRERDSMKQERIAVADLKSYLIQR 492


>gi|150865919|ref|XP_001385328.2| threonyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149387175|gb|ABN67299.2| threonyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 730

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N ++  IR+ Y+  GFD + TP + ++  L +         + +F+ 
Sbjct: 340 GSAFWLPHGTRIYNALVQFIRDEYQVRGFDEVITPNM-FNHKLWETSGHWGNYKENMFTF 398

Query: 74  QDDDGQWISLRYDLTAP 90
            D + +   L+      
Sbjct: 399 -DVEKETFGLKPMNCPG 414



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/253 (10%), Positives = 60/253 (23%), Gaps = 24/253 (9%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           LS   EK + E+          EK  NE           G  +        ++       
Sbjct: 497 LSTRPEKYVGEIETWNSAEKMLEKSLNEFKGEGGWELNPGDGAFYGPKIDIMISDALNRW 556

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
                  L F + N       F         D   S  +   +             + ++
Sbjct: 557 FQCATIQLDFQLPNR------FELEYKAETNDKGSSTSRPVMIHRAILGSVERMTAILIE 610

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLK 422
             +             I  +          Q   + L       A++ +  +     +++
Sbjct: 611 HYKGKWPFWLSPRQ--ILIVPVGPKYYEYGQKLQKELNDKYSFYADVDVSGN-TLPKKIR 667

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
                      I G  E     + +++                  E +     +   E+V
Sbjct: 668 TGQLYKYNFIFIVGDEEEQSASVNVRNR--------------DIPEEQGKNAMVKFDEVV 713

Query: 483 STVKKILQENKEE 495
             +  +  E +++
Sbjct: 714 KQLVSLRDEKRDD 726


>gi|15674109|ref|NP_268284.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81856528|sp|Q9CDT4|SYP_LACLA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|12725184|gb|AAK06225.1|AE006441_3 prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 616

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 89/312 (28%), Gaps = 14/312 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++ + +R  ++  G   +  P L  +D L +     D   + ++ L
Sbjct: 38  GIYAYLPLANRVLEKLKNIMREEFDEIGAVELLAPSLLTAD-LWRESGRYDTYGEDLYKL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ--- 127
           ++ D     L     +    L R    ++  +      Y+I P FR+EK       +   
Sbjct: 97  KNRDNSDFILGPTHEETMTSLVRDEITSYKKLP--LNVYQIAPKFRDEKRPRYGLLRGRE 154

Query: 128 --FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                    +    +            + +           I            E I + 
Sbjct: 155 FLMKDGYSYHADQDSLDETYNDYKKAYEKIFERAGLNFKPIIADAGAMGGKDSQEFIAIT 214

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE---GRTDNSGDFTKGANLTSEQIDIMVS 242
            D    E+ +VL       +   + V   + E          D    A       +I ++
Sbjct: 215 DDRINLEKWLVLSKNITSIEEIPESVLSEIKEELGKWLIAGEDTIVYAEGGDYAANIEMA 274

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
               +   +  E  EL K    G K  +E+    E+  +    +        +V  L   
Sbjct: 275 SSQFEPNVAYTEELELEKVATPGAKTIDEVSKFLEIDEEQTVKTLVYHADDELVVVLLNG 334

Query: 303 TGCVYEAILGFP 314
              + E  L   
Sbjct: 335 NDQLNEVKLTNY 346



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 21/125 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      L+     D  ++       + LR  G +  +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRNERA-GVKFADSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ +  G    + G++++K  A G+                   + I   ELV+T+ 
Sbjct: 572 IGLPVRVTIGKK-AAEGVVEVKIRATGE------------------VVEINKDELVNTI- 611

Query: 487 KILQE 491
           +IL +
Sbjct: 612 EILSK 616


>gi|268532388|ref|XP_002631322.1| C. briggsae CBR-TRS-1 protein [Caenorhabditis briggsae]
          Length = 704

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G A    K   I N+++D IR  Y   GF  + TP + Y+  L +        ++ 
Sbjct: 316 QLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNM-YNKKLWETSGHWQHYSED 374

Query: 70  VFSLQDDDGQWISLRYDLTAP 90
           +F ++ +  +   L+      
Sbjct: 375 MFKIEVEK-EEFGLKPMNCPG 394



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/155 (9%), Positives = 40/155 (25%), Gaps = 20/155 (12%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           +D    + +   +             +  +S               I T+          
Sbjct: 556 FDEKGEKQRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITVH--ESVRDYA 613

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +   + +  AG   E           Q++ +        ++ G  E+  G + ++     
Sbjct: 614 KDVKKQIFDAGFEVEYDEFCGDTMNKQVRNSQLAQFNFILVLGAKEKENGTVNVR----- 668

Query: 454 KELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                              +  +PI +L+S  ++ 
Sbjct: 669 -------------TRDNAVRGEVPIEKLLSKFRRF 690


>gi|71984184|ref|NP_001022033.1| Threonyl tRNA Synthetase family member (trs-1) [Caenorhabditis
           elegans]
 gi|1711653|sp|P52709|SYTC_CAEEL RecName: Full=Threonyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3875006|emb|CAA93762.1| C. elegans protein C47D12.6a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 725

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G A    K   I N+++D IR  Y   GF  + TP + Y+  L +        ++ 
Sbjct: 336 QLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNM-YNKKLWETSGHWQHYSED 394

Query: 70  VFSLQDDDGQWISLRYDLTAP 90
           +F ++ +  +   L+      
Sbjct: 395 MFKIEVEK-EEFGLKPMNCPG 414



 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/388 (10%), Positives = 93/388 (23%), Gaps = 54/388 (13%)

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD-TLEAVGIKRNDYHIGINNRKI 174
           +  + G          +     +S         M   +   E  G+K  +          
Sbjct: 362 QYRRRGFTEVITPNMYNKKLWETSGHWQHYSEDMFKIEVEKEEFGLKPMNCPGHCLMFGH 421

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           +     ++     D        +         GL  V+      + D++  F +   ++ 
Sbjct: 422 MPHTYNELPFRFADFGVLHRNEMSG----ALTGLTRVRR----FQQDDAHIFCRQDQISE 473

Query: 235 EQIDIMVSFLSIDLEKSMHELYEL---------VKGTIAGEKGFNELVVISE-----LVR 280
           E I   + FL    EK     ++L         +      +K   +L           V 
Sbjct: 474 E-IKQCLDFLEYAYEKVFGFTFKLNLSTRPEGFLGNIETWDKAEADLTNALNASGRKWVL 532

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
             G  +         ++             L F + N+               +D    +
Sbjct: 533 NPGDGAFYGPKIDITIQDALKRNFQCATIQLDFQLPNQFDLSY----------FDEKGEK 582

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +             +  +S               I T+              + +
Sbjct: 583 QRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITVH--ESVRDYANDVKKQI 640

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
             AG   E           Q++ A        ++ G  E+  G + ++            
Sbjct: 641 FEAGFEIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVR------------ 688

Query: 461 KNNESWREARVAQITIPISELVSTVKKI 488
                       +  + + +L+S  ++ 
Sbjct: 689 ------TRDNAVRGEVALDKLISKFRRF 710


>gi|317181547|dbj|BAJ59331.1| prolyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 577

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + LR  
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKN 462
           G+ A +    ++ FG +++  +     LA+I G         + IK     K+  ++ + 
Sbjct: 508 GVDALLDDRDAR-FGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTEL 566

Query: 463 NESWREARVAQ 473
            E   E   ++
Sbjct: 567 EEKILEMLESE 577



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|293372832|ref|ZP_06619210.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|298480838|ref|ZP_06999033.1| threonine--tRNA ligase [Bacteroides sp. D22]
 gi|292632207|gb|EFF50807.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|295085227|emb|CBK66750.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Bacteroides
           xylanisolvens XB1A]
 gi|298272861|gb|EFI14427.1| threonine--tRNA ligase [Bacteroides sp. D22]
          Length = 646

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/461 (10%), Positives = 114/461 (24%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + +R I   Y +  +                           
Sbjct: 261 KGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEV--------------------------- 293

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                         +T P+                    G   +  K          + +
Sbjct: 294 --------------ITPPI-----------GNKLLYVTSGHYAKYGKDAFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +         E+      + + + ++  ++           G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEF-----------GTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D       + VK          S  F        E    +   ++ +     
Sbjct: 378 RVRSFTQDDAHIFCRPEQVKDEFLRVMDIISIVFRSMDFQNFEAQISLRDKVNREKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            + +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DDNWEKAEQAIIEACAEKGLPAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   E +              D    R    +    G    + R +  L    +    
Sbjct: 495 NLPERFELEYMGS----------DNQKHRPVMIHRAPFGS---MERFVAVLIEHTAGKFP 541

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +  + P  +  +          +     L+   IRA +    ++  G +++  + +  P 
Sbjct: 542 LW-LTPEQVVILPISEKFNEYAEQVKMYLKIHEIRAIVD-DRNEKIGRKIRDNEMKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +I G  E   G + ++   +G + + + +         V 
Sbjct: 600 MLIVGEKEAENGEVSVRRQGEGDKGTMKFEEFAKILNEEVQ 640


>gi|281425750|ref|ZP_06256663.1| proline--tRNA ligase [Prevotella oris F0302]
 gi|281400158|gb|EFB30989.1| proline--tRNA ligase [Prevotella oris F0302]
          Length = 493

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 79/297 (26%), Gaps = 43/297 (14%)

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
              + + ++  +       +      L +        FL  +   +     E      A 
Sbjct: 140 HSWRDLPIMCNQWCNVMRWEMRTRPFLRTS------EFLWQEGHTAHATREE------AE 187

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
            +    L V ++   K         + S   R          EA++      +       
Sbjct: 188 VEAQKMLKVYADFAEKWMAVPVLQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFL 247

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLI 380
           G           +++               +RL+ AL                    V+I
Sbjct: 248 GQNFAKSFDVTFLNKENKPEYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVVI 307

Query: 381 TTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAII 434
             +    D L     K Q     L   GI  +     +K  G   K+AD   +  P+ ++
Sbjct: 308 VPIYKGDDQLKAISNKLQPVINKLEELGISVKYDDSDNKRPG--FKFADYELKGIPVRLV 365

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            G  +     ++I                   R   + + ++    +V  VK +L +
Sbjct: 366 MGGRDLENNTIEI------------------MRRDTLEKESVSFDGIVERVKTLLDD 404


>gi|300707071|ref|XP_002995759.1| hypothetical protein NCER_101261 [Nosema ceranae BRL01]
 gi|239604969|gb|EEQ82088.1| hypothetical protein NCER_101261 [Nosema ceranae BRL01]
          Length = 587

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 2/106 (1%)

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
             V+I+ +  ++   S        L    I AE+    S + G +    D    P  +  
Sbjct: 477 TKVIISYVVQNAVFTSYINNILDQLYDYNIVAEVN-ERSCSIGKKYASCDEIGIPYFVTF 535

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                    + I++    +++   I +        + +  I   EL
Sbjct: 536 DNDSLVDKKVTIRERDSMEQVRLNISDVSGIICNLINEK-ISWEEL 580


>gi|218530550|ref|YP_002421366.1| threonyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218522853|gb|ACK83438.1| threonyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 675

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 83/272 (30%), Gaps = 10/272 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNELVVIS 276
           D++  F     L +E + I    LS   +    ++   +          +  ++    + 
Sbjct: 387 DDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILVKLSMRPEKRVGSDALWDHAEAVM 446

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
             V       +  +I + +  G   + G  +E +L   +  + Q            R+D 
Sbjct: 447 TQVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRDAIGRDWQCGTTQVDFNLPERFDA 506

Query: 337 LVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                  Q  P           + R    L    +    +  + PV +      SD+   
Sbjct: 507 SYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGHFPLW-LAPVQVVVATITSDADPY 565

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   ++L  AG+R E  L  ++    +++       P+ +  G  E     + ++ +  
Sbjct: 566 AREVVRVLERAGLRVEADL-RNEKINYKVREHSLAKVPVLLALGRREAEERTVSVRRMGS 624

Query: 453 GKELSREIKNNESWREARVAQITIPISELVST 484
            K  +  +    +             ++  + 
Sbjct: 625 QKTTTMALDAALAAFIEEATSPDRRRADAAAE 656


>gi|114319929|ref|YP_741612.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|122312208|sp|Q0AAL5|SYT_ALHEH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114226323|gb|ABI56122.1| Ser-tRNA(Thr) hydrolase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 641

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/404 (12%), Positives = 103/404 (25%), Gaps = 29/404 (7%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
             F           +    R    G G         VD           +    M  T  
Sbjct: 262 MAFWHPKGWQIYLEVQEYIRRLTRGHGYQEIHTPQLVDRSLWEKSGHWDKFQDNMFITES 321

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
                         + ++ +  L+        +L E     R        GL  V+    
Sbjct: 322 ESRDYAVKPMNCPCHVQVYNQGLKSY-RDLPLRLAEFGSCHRNEPSGTLHGLMRVR---- 376

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
               D++  F     +  E  D +        +    ++   +        G + L   +
Sbjct: 377 NFVQDDAHIFCTEDQIQQEVADFIDLVFKAYNDFGFDDVIIALSTRPDERVGEDALWDKA 436

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----G 331
           E   +   N   ++       G  Y     +        +    +              G
Sbjct: 437 EHALEEALNRAGLEWQLQPGEGAFYGPKIEF---TLKDCLGRTWQLGTIQVDFSMPGRLG 493

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
             Y       K   +        + R I  L    +       + PV    ++       
Sbjct: 494 ATYVAEDGSKKVPVMLHRAILGSLERFIGILIEHYAGALP-PWLAPVQAVVLNITDRQGE 552

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +   +  R  G+R +  L  ++  G +++    +  P  ++ G  E     + ++   
Sbjct: 553 YARRIEKRFRERGLRVDADL-RNEKIGFKIREHTLQKVPYMLVVGDKEVENNTVAVR--- 608

Query: 452 KGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
                +RE ++  S       Q       L S + ++ + N E+
Sbjct: 609 -----TREGQDLGSMAVDDFLQR------LESEIARLGRSNSED 641



 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/152 (12%), Positives = 46/152 (30%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K  +I   + + IR +   +G+  I TP L       K     D+    +F  
Sbjct: 261 GMAFWHPKGWQIYLEVQEYIRRLTRGHGYQEIHTPQLVDRSLWEKS-GHWDKFQDNMFIT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +            + 
Sbjct: 320 ESES-RDYAVKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRNEPSGTLHGLMRVRNF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +     + ++   +AD ++ V    ND+
Sbjct: 379 VQDDAHIFCTEDQIQQEVADFIDLVFKAYNDF 410


>gi|67903696|ref|XP_682104.1| hypothetical protein AN8835.2 [Aspergillus nidulans FGSC A4]
 gi|40740933|gb|EAA60123.1| hypothetical protein AN8835.2 [Aspergillus nidulans FGSC A4]
          Length = 1309

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 10/119 (8%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VL+  +  +       Q  T  LR  G+ + +   SS + G   +YA  D    P  
Sbjct: 525 PTKVLLVPLSSNPAFRPMVQELTTKLRRLGVSSRVD-DSSASIGK--RYARNDELGTPFG 581

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +           + ++D    K++    +      ++ V        E    V+K L E
Sbjct: 582 VTVDFQSVKDNTITLRDRDSTKQVRASQEEILQALKSLVEG-----EETWEDVRKRLPE 635


>gi|332299347|ref|YP_004441268.1| Prolyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176410|gb|AEE12100.1| Prolyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 494

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/259 (10%), Positives = 73/259 (28%), Gaps = 33/259 (12%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E +         + +       +         + + S   R    
Sbjct: 171 EFLWQEGHTAHATQEEAIAEARKMIGVYEDFAREMLAL------PVIVGVKSETERFAGA 224

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G           + +   ++          +RL+ A
Sbjct: 225 IDTYTIEAMMQDGKALQSGTSHFLGQNFAKAFDVTFLDKEGNRDYVWATSWGVSTRLVGA 284

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +    + L +           LR  G+  ++   
Sbjct: 285 LIMAHSDDNGLVLPPRIAPIQVVIVPIYKSEEELQRIHETADKIVSELRQHGVSVQIDDN 344

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +K  G +    + +  P+ +  G  +   G +++                   R   + 
Sbjct: 345 DNKKPGWKFAEYEMKGVPVRLALGMRDLEHGTVEV------------------ARRDTLT 386

Query: 473 QITIPISELVSTVKKILQE 491
           + T+P+  + + ++++L++
Sbjct: 387 KETMPLEGISAHIEQLLED 405


>gi|206896471|ref|YP_002247167.1| threonyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206739088|gb|ACI18166.1| threonyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 632

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/132 (10%), Positives = 40/132 (30%), Gaps = 4/132 (3%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +             + ++              V I  +    D +   Q   + L
Sbjct: 500 HEPVMIHRALLGSLERFFALLIEQYSGWFPLWVAPEQVRILPI--TEDQMQYAQSVAEGL 557

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           +    R ++   +    G +++       P  ++ G+ E   G++ ++   KG      +
Sbjct: 558 KE--FRVKLDTDTGSKLGYRIRRGQTEKVPYMLVVGSKEVESGVVSVRHGVKGDLGQMSL 615

Query: 461 KNNESWREARVA 472
              +S  +  + 
Sbjct: 616 DEFKSMIKEEIE 627



 Score = 37.1 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
                  IR  I D  R  + + G+  + TP +  +  L +         + +F
Sbjct: 256 WHPNGAVIRKEIEDFWRQSHIDNGYQLVYTPHVARTK-LWEISGHLSFYKENMF 308


>gi|189910413|ref|YP_001961968.1| glycyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775089|gb|ABZ93390.1| Glycine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
          Length = 466

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 3/97 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V I  +       +K +     LR       +    S   G + +  D    P  I
Sbjct: 371 SPMKVAIFPLMKKDGLDAKAKEIYTDLRNHWY---VDYDDSGAIGKRYRRHDEIGTPFCI 427

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  S G + I++    K+    + + +S+   R
Sbjct: 428 TVDYDTMSDGTVTIRERDSMKQERIAVADLKSYLIQR 464


>gi|157145208|ref|YP_001452527.1| hypothetical protein CKO_00941 [Citrobacter koseri ATCC BAA-895]
 gi|157082413|gb|ABV12091.1| hypothetical protein CKO_00941 [Citrobacter koseri ATCC BAA-895]
          Length = 652

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   I   ++  +R+ +E  G+  + TP +    SL +     D     +F+ 
Sbjct: 273 GAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDVMDR-SLWEISGHWDNYRDHMFTT 331

Query: 74  QDDDGQWISLRYDLTAPLA 92
           Q +DG+  +L+        
Sbjct: 332 QTEDGRNFALKPMNCPGAV 350



 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 2/80 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M          +   + LR  G+R E  L  ++  G  ++       P  +
Sbjct: 548 WLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADL-RNEKIGFIIREQTLARIPFLL 606

Query: 434 IQGTGERSRGMLQIKDLAKG 453
           I G  E +   + ++D   G
Sbjct: 607 IVGDAEENAARVTVRD-RTG 625


>gi|325107787|ref|YP_004268855.1| glycyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968055|gb|ADY58833.1| glycyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 553

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/328 (8%), Positives = 78/328 (23%), Gaps = 27/328 (8%)

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
           +  ++   +    ++   +    +    +R+     +E      +     +    R    
Sbjct: 250 SRVKLPFGICQIGKSFRNEITPRNFTFRSREFEQMEIEFFCRPDESANWYQYWRNRRFQW 309

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
               G+   KL L E   +    ++ G    +  I+    FLS      +  +       
Sbjct: 310 YTDLGIASDKLQLREHHKEELAHYSVG----TADIEYAFPFLSPGDYGELEGV-----AH 360

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                  + +    +   K   + N         + L Y+     E  +   +       
Sbjct: 361 RGDFDLRSHMEGKLDGDLKVQLDENGQPKHRGSGKDLSYFDDQARERFVPNVIEPSAGAD 420

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
               +             +     P     +    ++          +         +  
Sbjct: 421 RATLAFLCEA--------YHVDEQPDEKGKMQTRTVL--------RFHPRLAPIKAAVFP 464

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +              + L+ AG+ A          G + +  D    P  I         
Sbjct: 465 LIKKEGMPETAAKIYRDLKKAGLTA--AYDQQGAIGRRYRRQDEIGTPYCITVDGQTAED 522

Query: 443 GMLQIKDLAKGKELSREIKNNESWREAR 470
             + ++D    ++    +       + R
Sbjct: 523 QTVTLRDRDSLEQTRIPLDRVTQEIQDR 550


>gi|204636657|gb|ACI01751.1| putative threonyl-tRNA synthetase [Escherichia coli]
          Length = 652

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   I   ++  +R+ +E  G+  + TP +    SL +     D     +F+ 
Sbjct: 273 GAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDVMDR-SLWEISGHWDNYRDHMFTT 331

Query: 74  QDDDGQWISLRYDLTAPLA 92
           Q +DG+  +L+        
Sbjct: 332 QTEDGRNFALKPMNCPGAV 350



 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M          +   + LR  G+R E  L  ++  G +++       P  +
Sbjct: 548 WLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADL-RNEKIGFKIREQTLARIPYLL 606

Query: 434 IQGTGERSRGMLQIKDLAKG 453
           I G  E +   + ++D   G
Sbjct: 607 IVGDAEENAARVTVRD-RTG 625


>gi|326795752|ref|YP_004313572.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546516|gb|ADZ91736.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 638

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/349 (10%), Positives = 92/349 (26%), Gaps = 8/349 (2%)

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           +R+                + +     +        +       + +     +  DY + 
Sbjct: 271 WRLYQAVEQYMRQKQLDNNYQEVKTPQIVDRVLWEKSGHWGKYQENMFTTHSENRDYAVK 330

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             N      +  +      D                   L G+ + +     D+   F  
Sbjct: 331 PMNCPCHIQVYNQGLKSYRDLPFRMAEFGSCHRNEPSGALHGI-MRVRNFVQDDGHIFVT 389

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
              + SE  + +     +  +     +   +        G +E+   +E       +   
Sbjct: 390 ENQIQSEVSEFIKLLHEVYADFGFDNIIYRLSTRPEQRVGSDEVWDKAEKALADALDVAG 449

Query: 289 IKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           ++       G  Y     +   +AI         Q      +  G        SR     
Sbjct: 450 LEWEELPGEGAFYGPKIEFSLKDAIGRVWQCGTIQVDFSMPTRLGAQYVSEDGSRQTPVM 509

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +           + + ++  E S           +  M+         +   + L + G 
Sbjct: 510 LHRAIVGSLERFIGILIEETEGSFPLWLAPEQ--VVIMNITDRQTEYCENLEKTLNSNGF 567

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           RA++ L  ++  G +++    +  P  I+ G  E   G + ++    G+
Sbjct: 568 RAKLDL-RNEKIGFKIREHTLQRIPYLIVVGDKEVENGKVAVRT-RSGE 614



 Score = 40.2 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 9/152 (5%), Positives = 43/152 (28%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+   +   +R    +  +  ++TP +     L +      +  + +F+ 
Sbjct: 262 GMVFWHPKGWRLYQAVEQYMRQKQLDNNYQEVKTPQIVDR-VLWEKSGHWGKYQENMFTT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             ++ +  +++        +   +   +                 +            + 
Sbjct: 321 HSEN-RDYAVKPMNCPCHIQVYNQGLKSYRDLPFRMAEFGSCHRNEPSGALHGIMRVRNF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                     + ++   +++ ++ +     D+
Sbjct: 380 VQDDGHIFVTENQIQSEVSEFIKLLHEVYADF 411


>gi|254382091|ref|ZP_04997453.1| prolyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
 gi|194340998|gb|EDX21964.1| prolyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
          Length = 565

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                 R+ + +   +R   +  G   +  P L   E  +  G++    D     +F L+
Sbjct: 48  WLPLGKRVLDNVSRVVREEMDAIGAQEVLLPALLPKEPYEVSGRWSEYGD----LLFRLK 103

Query: 75  DDDGQWISLRY 85
           D  G    L  
Sbjct: 104 DRKGADYLLGP 114


>gi|170756076|ref|YP_001783145.1| putative prolyl-tRNA synthetase [Clostridium botulinum B1 str.
           Okra]
 gi|169121288|gb|ACA45124.1| putative prolyl-tRNA synthetase [Clostridium botulinum B1 str.
           Okra]
          Length = 545

 Score = 48.3 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             L            V++T  +  D       +     L   GI   +     +  G + 
Sbjct: 435 DELGIVWPMETSAFKVIVTIANVKDEQQFKVGEKIYSSLVNIGIGTILDDRKERA-GVKF 493

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K AD    P+ I  G        ++IK     ++    I   +   ++
Sbjct: 494 KDADLWGIPIRITVGKN-IKENNVEIKLRNSKEKKEIPIDQLQESIKS 540


>gi|319442178|ref|ZP_07991334.1| threonyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 697

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 9/118 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +T +    + +   +  T  LR  GIRA +     +    +++       P  +
Sbjct: 584 WLAPHQVTGIPVADEFIPYLEEVTAELRGHGIRAAVDTSDDR-MQKKIRNHTTGKVPFML 642

Query: 434 IQGTGERSRGMLQIKDLAKGKEL-----SREIKNNESWREARVAQITIPISELVSTVK 486
           + G  +   G +  + L  G ++        ++    W  +R      P  E V  ++
Sbjct: 643 LVGGRDVEAGAVSFRFL-DGTQVNGVPKEDAVRIIAEWVSSRRNDQ--PSGESVDALR 697



 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 68/242 (28%), Gaps = 16/242 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            GF         +R  + +  R  +   G+  + TP +   D   K     D    G+F 
Sbjct: 295 SGFPVFHPDGATVRMEMEEHSRRRHIASGYSFVNTPHITKGDLFKKS-GHLDWYADGMFP 353

Query: 72  --SL---QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              L   +D DG        +T     Y A+  +  +        G  +R        F 
Sbjct: 354 AMKLDEERDADGN-------ITKQAVDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFG 406

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI-LEKIGLH 185
              + +   V      A                ++     +      +L    L+   L 
Sbjct: 407 TVYRYEKSGVVHGLTRARGFTQDDAHIYCTEDQLEVELTTVLEFIISLLKDYGLDDFYLE 466

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGV-KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
              K  ++ +    + +     L+ V +    E   D  G    G  ++ +  D +    
Sbjct: 467 LSTKDPKKFVGSDEVWEKATNTLRAVAEKSGLELVPDPEGAAFYGPKISVQARDAIGRTW 526

Query: 245 SI 246
            +
Sbjct: 527 QM 528


>gi|302537254|ref|ZP_07289596.1| prolyl-tRNA synthetase [Streptomyces sp. C]
 gi|302446149|gb|EFL17965.1| prolyl-tRNA synthetase [Streptomyces sp. C]
          Length = 570

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGVFSLQ 74
                 ++ + +   +R   +  G   +  P L   E  +  G++    D     +F L+
Sbjct: 53  WLPLGKKVLDNVSRIVREEMDAIGAQEVLLPALLPKEPYEVSGRWSEYGD----LLFRLK 108

Query: 75  DDDGQWISLRY 85
           D  G    L  
Sbjct: 109 DRKGADYLLGP 119


>gi|294626197|ref|ZP_06704803.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292599549|gb|EFF43680.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 634

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R +Y + G+  +  P +       K     D     +F  
Sbjct: 262 GLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKS-GHWDNYQDAMF-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +       Y         + 
Sbjct: 320 TESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEP 366


>gi|284919690|emb|CAX65467.1| hypothetical protein [Enterobacter hormaechei]
          Length = 662

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   I   ++  +R+ +E  G+  + TP +    SL +     D     +F+ 
Sbjct: 283 GAVFWHPRGWTIFQSLIAYMRSRHEVAGYVEVNTPDVMDR-SLWEISGHWDNYRDHMFTT 341

Query: 74  QDDDGQWISLRYDLTAPLA 92
           Q +DG+  +L+        
Sbjct: 342 QTEDGRNFALKPMNCPGAV 360



 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M          +   + LR  G+R E  L  ++  G +++       P  +
Sbjct: 558 WLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADL-RNEKIGFKIREQTLARIPFLL 616

Query: 434 IQGTGERSRGMLQIKDLAKG 453
           I G  E +   + ++D   G
Sbjct: 617 IVGDAEENAARVTVRD-RTG 635


>gi|260774298|ref|ZP_05883213.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611259|gb|EEX36463.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 642

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/350 (12%), Positives = 93/350 (26%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 299 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F     +  E    +              +
Sbjct: 359 FGSCHRNEPSGSLHGI-MRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYNTFGFENI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K   ++  I        G  Y     +        
Sbjct: 418 AVKLSTRPEKRVGSDEIWDKSEEALKHSLDAMGIAYEIQEGEGAFYGPKIEFTLY---DC 474

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           ++   +              G  Y G  +      +        + R I  L    +   
Sbjct: 475 LDRAWQCGTVQLDFNLPSRLGATYVGESNERLVPVMIHRAILGSLERFIGILIEEYAGFF 534

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +     D  +    Q   Q L+  GIRA+  L  ++  G +++    +  P
Sbjct: 535 PTWLAPEQAVVVNITDKQA-DYAQEVVQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVP 592

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  +  +A V+   + + E
Sbjct: 593 YMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFITHIQAEVSSRQLNLEE 642



 Score = 37.9 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 44/167 (26%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR+    Y +  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFIRHKLTEYDYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V    N +       K
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYNTFGFENIAVK 420


>gi|261420842|ref|YP_003254524.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319768511|ref|YP_004134012.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261377299|gb|ACX80042.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317113377|gb|ADU95869.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 460

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/238 (6%), Positives = 62/238 (26%), Gaps = 10/238 (4%)

Query: 241 VSFLSIDLEK--SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E+   +    +  K  +       + + + +  ++   + +           
Sbjct: 224 LEFFCKPGEELQWLEYWKQFCKEWLLSLGMKEDNIRLRDHAKEELSHYSNATTDIEYHFP 283

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   + +    +              +  +      ++ A   ++     
Sbjct: 284 FGWGELWGIASRTDYDLKRHMEYSGEDFHYLDQETNERYIPYCIEPSLGADRVTLAFMID 343

Query: 359 IVALKSLES-----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + LE        +    + P     +          +   + L        +    
Sbjct: 344 AYDEEELEDGTTRTVMHLHPALAPYKAAVLPLSKKLADGARRIYEELAKH---FMVDYDE 400

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           + + G + +  D    P  I         G + ++D    +++   I   +++ E ++
Sbjct: 401 TGSIGKRYRRQDEIGTPFCITYDFESEQDGQVTVRDRDTMEQVRLPIGELKAFLEEKI 458


>gi|168178808|ref|ZP_02613472.1| putative prolyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226950957|ref|YP_002806048.1| putative prolyl-tRNA synthetase [Clostridium botulinum A2 str.
           Kyoto]
 gi|182670058|gb|EDT82034.1| putative prolyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226841905|gb|ACO84571.1| putative prolyl-tRNA synthetase [Clostridium botulinum A2 str.
           Kyoto]
          Length = 545

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             L            V++T  +  D       +     L   GI   +     +  G + 
Sbjct: 435 DELGIVWPMETSAFKVIVTIANVKDEQQFKVGEKIYSSLVNIGIGTILDDRKERA-GVKF 493

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K AD    P+ I  G        ++IK     ++    I   +   ++
Sbjct: 494 KDADLWGIPIRITVGKN-IKENNVEIKLRNSKEKKEIPIDQLQESIKS 540


>gi|146302666|ref|YP_001197257.1| prolyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|259511597|sp|A5FA31|SYP_FLAJ1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|146157084|gb|ABQ07938.1| prolyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 492

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/266 (11%), Positives = 73/266 (27%), Gaps = 37/266 (13%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E ++ +      + +       +             +   R    
Sbjct: 168 EFLWQEGHTAHATKDEAIEESEKMMNVYADFAENFMAI------PVVKGFKTETERFAGA 221

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G            +    Q           +RL+ A
Sbjct: 222 DETYCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFANAEGKQEHVWGTSWGVSTRLMGA 281

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +    + L+         T  LR   I  +    
Sbjct: 282 LIMTHSDDQGLVLPPNLAPIQVVIVPIHKTDEQLAQITAAVNELTAKLRKLKISVKYDDR 341

Query: 413 SSKNFGNQLKYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           +++  G   K+A+   +  P+ I  G  +   G  ++                   R   
Sbjct: 342 TTQKPG--FKFAEWELKGVPVRIAVGPKDLENGTFEV------------------ARRDN 381

Query: 471 VAQITIPISELVSTVKKILQENKEEI 496
           +++  +   ++V  V  +L++ ++++
Sbjct: 382 LSKEVVAAEKIVDHVNDLLEQIQKDL 407


>gi|124267077|ref|YP_001021081.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium
           petroleiphilum PM1]
 gi|166225459|sp|A2SH07|SYT_METPP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|124259852|gb|ABM94846.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium
           petroleiphilum PM1]
          Length = 635

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 69/264 (26%), Gaps = 14/264 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R +Y + G+  ++ P +     L +     D+  + +F +
Sbjct: 261 GLVFWHPKGWTVWQQVEQYMRAVYRDNGYLEVKGPQI-LDQGLWEKTGHWDKYRENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        ++YR  P+   E     R         
Sbjct: 319 TESEKRDYALKPMNCPG-------HILIYKQGIKSYRDLPLRYGEFGQCHRNEPTGGLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +       L               +    D I +          ++ 
Sbjct: 372 IMRVRGFTQDDGHIFCTEEHILPECVAYTALLQKVYKDFGFNDIIYKVATRPEKRIGSDA 431

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
           +      DK +   ++ ++    E           G  +     D +         +   
Sbjct: 432 V-----WDKAEHALMESLRASGCEFVVSPGDGAFYGPKIEYTLKDALGRQWQCGTMQVDF 486

Query: 254 ELYELVKGTIAGEKGFNELVVISE 277
            L E +      E G     V+  
Sbjct: 487 SLPERLDAVYVAESGERLFPVMLH 510


>gi|71984192|ref|NP_001022034.1| Threonyl tRNA Synthetase family member (trs-1) [Caenorhabditis
           elegans]
 gi|30145813|emb|CAD89723.1| C. elegans protein C47D12.6b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 684

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G A    K   I N+++D IR  Y   GF  + TP + Y+  L +        ++ 
Sbjct: 295 QLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFTEVITPNM-YNKKLWETSGHWQHYSED 353

Query: 70  VFSLQDDDGQWISLRYDLTAP 90
           +F ++ +  +   L+      
Sbjct: 354 MFKIEVEK-EEFGLKPMNCPG 373



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 40/388 (10%), Positives = 93/388 (23%), Gaps = 54/388 (13%)

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD-TLEAVGIKRNDYHIGINNRKI 174
           +  + G          +     +S         M   +   E  G+K  +          
Sbjct: 321 QYRRRGFTEVITPNMYNKKLWETSGHWQHYSEDMFKIEVEKEEFGLKPMNCPGHCLMFGH 380

Query: 175 LDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS 234
           +     ++     D        +         GL  V+      + D++  F +   ++ 
Sbjct: 381 MPHTYNELPFRFADFGVLHRNEMSG----ALTGLTRVRR----FQQDDAHIFCRQDQISE 432

Query: 235 EQIDIMVSFLSIDLEKSMHELYEL---------VKGTIAGEKGFNELVVISE-----LVR 280
           E I   + FL    EK     ++L         +      +K   +L           V 
Sbjct: 433 E-IKQCLDFLEYAYEKVFGFTFKLNLSTRPEGFLGNIETWDKAEADLTNALNASGRKWVL 491

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
             G  +         ++             L F + N+               +D    +
Sbjct: 492 NPGDGAFYGPKIDITIQDALKRNFQCATIQLDFQLPNQFDLSY----------FDEKGEK 541

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
            +   +             +  +S               I T+              + +
Sbjct: 542 QRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITVH--ESVRDYANDVKKQI 599

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
             AG   E           Q++ A        ++ G  E+  G + ++            
Sbjct: 600 FEAGFEIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVR------------ 647

Query: 461 KNNESWREARVAQITIPISELVSTVKKI 488
                       +  + + +L+S  ++ 
Sbjct: 648 ------TRDNAVRGEVALDKLISKFRRF 669


>gi|296119853|ref|ZP_06838407.1| glycine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295967007|gb|EFG80278.1| glycine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 459

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 33/99 (33%), Gaps = 3/99 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  +    +  +  +     LR  G+   +    S   G + +  D    P  +
Sbjct: 362 SPVKVAVLPLSKKEELSTPAKEVADKLR--GLW-NIDFDVSGAIGRRYRRQDEIGTPFCV 418

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                      + +++    ++   +I   E++  AR+A
Sbjct: 419 TYDFDSLEDNAVTVRERDSMEQERVKIDELETYLAARLA 457


>gi|290559900|gb|EFD93222.1| prolyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 477

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 59/238 (24%), Gaps = 7/238 (2%)

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            A       L    + + +           S   +          EA+L    M++    
Sbjct: 170 EADNNAREILQFYKQYMEEMLAIPVIAGRKSESEKFAGAVDTYTIEAVLSNNFMSQAATS 229

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-------KSLESSTNNIKEM 375
              G           +        P         R I  +       K L    +     
Sbjct: 230 HNLGRNFSKPFDIKFLDENNNLQYPFQTSWGISMRSIGIMVLIHGDDKGLVLPPHIAPYQ 289

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
             ++    D     L         L   GIR  +F     + G +L  +D +  P+ I  
Sbjct: 290 CAIIPILKDEKDKVLEYADKVNLKLNELGIRTILFNRDDVSPGWKLNDSDMKGIPIKIQI 349

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           G  E     + +K     +  S    +    ++         +S         ++E K
Sbjct: 350 GKKELESDSIFVKTRISNEASSIAFSDISKIKDKLEEIQNYMLSNAREQANHRIKEEK 407


>gi|183601640|ref|ZP_02963010.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683826|ref|YP_002470209.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190862|ref|YP_002968256.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196268|ref|YP_002969823.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|254783508|sp|B8DUF4|SYT_BIFA0 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|183219246|gb|EDT89887.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621476|gb|ACL29633.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249254|gb|ACS46194.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250822|gb|ACS47761.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|289178601|gb|ADC85847.1| Threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295793851|gb|ADG33386.1| threonyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 692

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 107/382 (28%), Gaps = 34/382 (8%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            +        +T  I      E  G  ++ +       ++    +     +       L+
Sbjct: 297 MHRKNHYSFVQTPHITKGGLYETSGHLQWYKDGMYPPMHLDEEKDENGNIVKQGFDYYLK 356

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
            +    ++       R   +  L         +L E   V R        GL  V+ L  
Sbjct: 357 PMNCPMHNLIFKSRQRSYRELPL---------RLFEFGTVYRYEKSGVVHGLTRVRGLTQ 407

Query: 217 EGRTDNSGDFTK---GANLTSEQIDIMVSFLSIDLEKSM--HELYELVKGTIAGEKGFNE 271
           +                NL +  + ++  +   D    +   + ++ V      E+  N 
Sbjct: 408 DDSHIYCTREQMKDELKNLLNFVLKVLKDYGLNDFYLELSTKDEHKFVGSDEIWEEATNT 467

Query: 272 LVVISEL----VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
           L  ++E     +      +       ++              I     + E+ +      
Sbjct: 468 LAEVAEESGLELVADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAP 527

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDHD 386
            G         S  +   +    F        + L+    +    +  +  + +   D  
Sbjct: 528 DG---------SHQRPVMIHRALFGSIERFFAILLEHYAGAFPAWLAPVQALGVPVADEF 578

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           +  L K+      L    +R E      + FG +++ A +   P  II G  + +   + 
Sbjct: 579 APHLDKFM---NSLEEDLVRVETDNSDDR-FGKKIRNASKSKVPYIIIAGEEDMNNNAVS 634

Query: 447 IKDLAKGKELS-REIKNNESWR 467
            +    G +L+   +   ++W 
Sbjct: 635 FR-FRDGSQLNGVPVDQAKAWI 655


>gi|153815621|ref|ZP_01968289.1| hypothetical protein RUMTOR_01857 [Ruminococcus torques ATCC 27756]
 gi|317502155|ref|ZP_07960332.1| glycine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090328|ref|ZP_08339212.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847052|gb|EDK23970.1| hypothetical protein RUMTOR_01857 [Ruminococcus torques ATCC 27756]
 gi|316896442|gb|EFV18536.1| glycine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401463|gb|EGG81048.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 466

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 33/103 (32%), Gaps = 3/103 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV I  +          +     L +     E       N G + +  D    
Sbjct: 366 HFHPALAPVKIGVLPLSKKLNEGAEKVFAQL-SKYYNCEFD--DRGNIGKRYRRQDEIGT 422

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P  +         G + ++D    ++   +I++ +++ E +  
Sbjct: 423 PFCVTYDFDSEEDGAVTVRDRDTMEQERVKIEDLKAYFEKKFE 465


>gi|73956414|ref|XP_546694.2| PREDICTED: similar to prolyl-tRNA synthetase
           (mitochondrial)(putative) [Canis familiaris]
          Length = 632

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 1/68 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   ++   I    +  G   +  P L  ++ L +     D   K +  L+D  
Sbjct: 247 LLPYTVRAMEKLQRVIDQEMQAIGGQKVNMPSLSPAE-LWRATNRWDLMGKELLRLRDRH 305

Query: 78  GQWISLRY 85
           G+   L  
Sbjct: 306 GKEYCLGP 313



 Score = 38.3 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 3/44 (6%)

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
            LR       +   + +  GN+LK A++   P  II G      
Sbjct: 560 QLRGE---VLLDDRTHRTIGNRLKDANKFGYPFVIIAGKRALED 600


>gi|73951037|ref|XP_536172.2| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 1
           [Canis familiaris]
          Length = 802

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 34/116 (29%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K   V      +G    ++A+ S          + P  +  +         
Sbjct: 653 TYVSKDGDDKRNPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 712

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +      G  A++ L  S     +++ A        ++ G  E++   + ++
Sbjct: 713 ALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNVR 768



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + ++  L +        ++ +F+  D +
Sbjct: 424 FLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNM-FNSKLWETSGHWQHYSENMFTF-DIE 481

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 482 KDTFALKPMNCPGHCLMFAHR 502


>gi|115359784|ref|YP_776922.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ambifaria
           AMMD]
 gi|115285072|gb|ABI90588.1| tRNA synthetase, class II (G, H, P and S) [Burkholderia ambifaria
           AMMD]
          Length = 402

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/383 (9%), Positives = 91/383 (23%), Gaps = 19/383 (4%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE-----TADAEMCMMMA 152
           +          +    +            +  Q     V +           +       
Sbjct: 17  HQQDESPGAIFWHPRGMVLYRVVEEYIRVRMRQAAFAEVRTPQIVSRDLWEQSGHWEKFG 76

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
             + ++    N Y +   +      I +K      D                   L G+ 
Sbjct: 77  RNMFSLESDNNPYCLKPMSCPCHVQIFKKGSRSYRDLPIRYSEFGAVHRAEPSGALHGL- 135

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           +       D++        +  E     V   +I  +    E    +    A   G + +
Sbjct: 136 MRARAFTQDDAHVLCMPDQVEIEVARFCVLLKTIYADFGFGEFDVALSTRPAVRAGDDAV 195

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG--- 329
              SE +  S   +  +  +     G  Y     +     F     K +           
Sbjct: 196 WDRSEAMLASAARAAGLDFAIQAGEGAFYGPKLEFHL---FDRQGRKWQCGTIQLDFVLP 252

Query: 330 ---GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
              G        ++     +           + + L+  E           +++  +  D
Sbjct: 253 ERLGAAYVAEDGAKATPVMLHHAVLGSLERFIGILLEHYEGWLPTWLAPDQIVVANIGKD 312

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
             + +    +       G R      + +        A     P+  I G  E   G + 
Sbjct: 313 DRAFADNTAFAFE--DIGCRVLRDFRAERLPRKIFD-ARELAAPIVAIAGRKEALAGEVS 369

Query: 447 IKDLAKGKELSREIKNNESWREA 469
           ++ L  G++    I +  ++ + 
Sbjct: 370 LR-LRDGEQHVLTINDALAYLKQ 391



 Score = 42.1 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 18 CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
             + + +   + + IR       F  + TP +   D L +     ++  + +FSL+  D
Sbjct: 28 WHPRGMVLYRVVEEYIRVRMRQAAFAEVRTPQIVSRD-LWEQSGHWEKFGRNMFSLE-SD 85

Query: 78 GQWISLRY 85
               L+ 
Sbjct: 86 NNPYCLKP 93


>gi|260436778|ref|ZP_05790748.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414652|gb|EEX07948.1| prolyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 597

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 38/156 (24%), Gaps = 9/156 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         R+  +I   +R      G      P L  ++   K    +        +
Sbjct: 41  SGIYAYLPLMWRVLQKITAVVREEMNRAGAQETLLPQLHPAELWQKSGRWQGYTAGEGIM 100

Query: 71  FSLQDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
           F L+D  G+ + +     ++   LA    R   +    +      +R     R       
Sbjct: 101 FHLEDRQGRELGIGPTHEEVITSLAGELLRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGR 160

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
            F            +        M        E  G
Sbjct: 161 EFIMKDAYSFHASEADLRETYGAMDQAYRRIFERCG 196



 Score = 44.1 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 2/80 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I     +++     D       +     L+ AG+   +     +  G + K AD  
Sbjct: 494 WPTAIAPFEAIVVVANIQDDIQAQLGEALYAELQAAGVDVLLDDRKERA-GVKFKDADLI 552

Query: 428 NCPLAIIQGTGERSRGMLQI 447
             P  I+ G    S G +++
Sbjct: 553 GIPWRIVVGRD-ASEGTVEL 571


>gi|254692871|ref|NP_001157090.1| threonyl-tRNA synthetase, mitochondrial isoform 3 [Mus musculus]
          Length = 642

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +     +FSL+   
Sbjct: 248 FLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL-FSTKLWEQSGHWEHYRADMFSLKPPG 306


>gi|254565877|ref|XP_002490049.1| Protein of unknown function that may interact with ribosomes, based
           on co-purification experiments [Pichia pastoris GS115]
 gi|238029845|emb|CAY67768.1| Protein of unknown function that may interact with ribosomes, based
           on co-purification experiments [Pichia pastoris GS115]
 gi|328350453|emb|CCA36853.1| prolyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 677

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 47/169 (27%), Gaps = 26/169 (15%)

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--------HDS 387
                F  QN       +    ++V   +             V++  +          + 
Sbjct: 423 DKPKLFAWQNSWGLSTRVIGVMVMVHSDNKGLVIPPRVSQYQVIVIPVGITSKTTKEEEQ 482

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
             L+        LR   +R      ++ + G +   A+ +  PL I  G  +  +  +  
Sbjct: 483 KILATCNKIEGKLRQNDLRVTSDYRTNYSPGWKFSNAELKGIPLRIEVGPRDLQKNTVV- 541

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                            + R     + TI +      +  +L+  + E+
Sbjct: 542 -----------------AVRRDDFTKTTISLDTFEKEISDLLETMQAEM 573


>gi|148706886|gb|EDL38833.1| threonyl-tRNA synthetase-like 1 [Mus musculus]
          Length = 630

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +     +FSL+   
Sbjct: 236 FLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL-FSTKLWEQSGHWEHYRADMFSLKPPG 294


>gi|120403545|ref|YP_953374.1| threonyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|166225469|sp|A1T868|SYT_MYCVP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119956363|gb|ABM13368.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Mycobacterium
           vanbaalenii PYR-1]
          Length = 691

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/484 (12%), Positives = 121/484 (25%), Gaps = 97/484 (20%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   +R  + +  R  +   G++ + TP +   + L       +    G+F 
Sbjct: 284 SGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFVNTPHI-TKEHLYITSGHLEWYADGMF- 341

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                            P     AE  D                  K G   + + + C 
Sbjct: 342 -----------------PAMHIDAEYNDDGT-------------VRKPGQDYYLKPMNCP 371

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVG--IKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
           + ++   +         +      +V    K    H     R +            + + 
Sbjct: 372 MHHLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREEMRD 431

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN---SGDFTKGANLTS-EQIDIMVSFLSI 246
               ++   +D L  +GL    L L     D    S D  + A  T  E  +     L  
Sbjct: 432 ELARLLQFVLDLLADYGLDDFYLELSTKDPDKFVGSDDMWEEATETLREVAESSGLHLVP 491

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D   +     ++            ++  I                +    +        +
Sbjct: 492 DPGGAAFYGPKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTAADGTRKRPVLIHRAL 551

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           + +I  F  +  +     F +                                       
Sbjct: 552 FGSIERFFGVLTEHYAGAFPAWLA------------------------------------ 575

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                     PV +  +    D +         LR  GIRAE+     +     + + + 
Sbjct: 576 ----------PVQVVGIPVADDHIRYLDGLVAQLRALGIRAEVDTSDDRMAKKIVNHTN- 624

Query: 427 RNCPLAIIQGTGERSRGMLQIK--DLAK-----GKELSREIKNNESWREARVAQITIPIS 479
           +  P  ++ G  +     +  +  D  +      ++    I +  + RE        P +
Sbjct: 625 QKVPFMLLAGDRDVEAEAVSFRFGDRTQVNGVPREQAVAAIVDWVTRRENAT-----PTA 679

Query: 480 ELVS 483
           ELV 
Sbjct: 680 ELVE 683


>gi|254692865|ref|NP_082207.2| threonyl-tRNA synthetase, mitochondrial isoform 1 [Mus musculus]
 gi|118597388|sp|Q3UQ84|SYTM_MOUSE RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS; AltName:
           Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor
 gi|74216488|dbj|BAE25159.1| unnamed protein product [Mus musculus]
 gi|187956085|gb|AAI47502.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus]
          Length = 723

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +     +FSL+   
Sbjct: 329 FLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL-FSTKLWEQSGHWEHYRADMFSLKPPG 387


>gi|254692867|ref|NP_001157089.1| threonyl-tRNA synthetase, mitochondrial isoform 2 [Mus musculus]
 gi|14290460|gb|AAH08995.1| Tars2 protein [Mus musculus]
          Length = 697

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +     +FSL+   
Sbjct: 329 FLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL-FSTKLWEQSGHWEHYRADMFSLKPPG 387


>gi|12847728|dbj|BAB27683.1| unnamed protein product [Mus musculus]
          Length = 723

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  R+ N ++  IR  Y   GF  ++TP L +S  L +     +     +FSL+   
Sbjct: 329 FLPRGTRVYNALVAFIRAEYARRGFSEVKTPTL-FSTKLWEQSGHWEHYRADMFSLKPPG 387


>gi|268567756|ref|XP_002647865.1| Hypothetical protein CBG23664 [Caenorhabditis briggsae]
 gi|187040879|emb|CAP20462.1| hypothetical protein CBG_23664 [Caenorhabditis briggsae AF16]
          Length = 265

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 1/85 (1%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M  +        +GF        R+ +++   + + ++N G   +  P++  +  L    
Sbjct: 29  MLIENGFILPTAKGFYSLLPLGQRVIDKLCRILDSEFQNSGAMKVGMPIV-GTKQLWDRT 87

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              +     +   +D     + L+ 
Sbjct: 88  RRWEAMGSEMLKFEDRQKAQLCLQP 112


>gi|332528434|ref|ZP_08404426.1| prolyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332042113|gb|EGI78447.1| prolyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 581

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 39/96 (40%), Gaps = 5/96 (5%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   ++ +L  G        +R+ N++   +R      G   +  P+++ ++ L +  
Sbjct: 26  MTRAGMIK-KLGAGIYTYMPMGLRVINKVAAIVREEMNRAGAIELTMPVIQPAE-LWQET 83

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY---DLTAPLAR 93
              ++    +  +QD   +   ++    ++   +AR
Sbjct: 84  GRFEKMGPELLRIQDRHERDFVVQPTSEEVVTDIAR 119



 Score = 39.8 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 9/110 (8%), Positives = 32/110 (29%), Gaps = 3/110 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +      +      V++  ++ D   +  +  +     L  AG+   +     +  G  
Sbjct: 470 DAKGIIWPDAIAPFTVVVCPINPDRSPEVKTAAEKLYAELLAAGVDVILD-DRGERPGAM 528

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
               +    P  +  G      G ++ +     +     + +  ++   +
Sbjct: 529 FADWELIGVPHRVTIGDRTLKEGKVEYQHRRDAEATPLAVGDAAAFVLGK 578


>gi|331007295|ref|ZP_08330496.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418902|gb|EGG93367.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 640

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 4/116 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   I   I + +R +  + G+  I+TP +       +     D+ 
Sbjct: 256 MQEEAP-GMVFWHPKGWSIYATIEEYMRKVQRDNGYKEIKTPQVVDRSLWERS-GHWDKF 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHG 121
              +F+++ +  +  +++        +   +   +    P R    G   RNE  G
Sbjct: 314 RDNMFTVESES-RDYAIKPMNCPCHVQVFNQGLKSYKELPLRLAEFGSCHRNEASG 368



 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  ++   +     Q   + LR  G R    L  ++  G +++    +  P  ++ G  
Sbjct: 541 QVAILNITDNQSEYVQKTEKALRDKGFRVISDL-RNEKIGFKIREHTLQRIPYLLVIGDK 599

Query: 439 ERSRGMLQIKDLAKGK 454
           E     L ++    G+
Sbjct: 600 EVENNALAVRT-RTGE 614


>gi|228471025|ref|ZP_04055869.1| prolyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|313885947|ref|ZP_07819685.1| proline--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|228307245|gb|EEK16268.1| prolyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|312924477|gb|EFR35248.1| proline--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 494

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/259 (10%), Positives = 73/259 (28%), Gaps = 33/259 (12%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E +         + +       +         + + S   R    
Sbjct: 171 EFLWQEGHTAHATQEEAIAEARKMIGVYEDFAREMLAL------PVIVGVKSETERFAGA 224

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G           + +   ++          +RL+ A
Sbjct: 225 IDTYTIEAMMQDGKALQSGTSHFLGQNFAKAFDVTFLDKEGNRDYVWATSWGVSTRLVGA 284

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +    + L +           LR  G+  ++   
Sbjct: 285 LIMAHSDDNGLVLPPRIAPIQVVIVPIYKSEEELQRIHETADKIVSELRQHGVSVQIDDN 344

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +K  G +    + +  P+ +  G  +   G +++                   R   + 
Sbjct: 345 DNKKPGWKFAEYEMKGVPVRLALGMRDLEHGTVEV------------------ARRDTLT 386

Query: 473 QITIPISELVSTVKKILQE 491
           + T+P+  + + ++++L++
Sbjct: 387 KETMPLEGISAHIEQLLED 405


>gi|161344762|ref|NP_441328.2| prolyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|114152887|sp|P73942|SYP_SYNY3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 603

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 4/76 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   ++      G      P L+ S+ L K     D   +    
Sbjct: 37  SGLYAYLPLIWRVLEKVKRIVQEEMNRTGAQECLLPQLQPSE-LWKMSGRWDTYTESEGI 95

Query: 70  VFSLQDDDGQWISLRY 85
           +F+L+D   + + L  
Sbjct: 96  MFALRDRLERELGLGP 111


>gi|94986656|ref|YP_594589.1| threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|122988800|sp|Q1MRV8|SYT_LAWIP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|94730905|emb|CAJ54268.1| Threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 642

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +          +     L+  GIR  + +  ++  G +++ A     P  +
Sbjct: 532 WLTPIQVKILTVTDAQTPFAKHVYSQLQDVGIRVGLDI-RNEKLGFKIREAQLAKIPYIL 590

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E     + ++ L  G+
Sbjct: 591 VIGQKELELESVNVR-LRTGE 610



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/90 (8%), Positives = 26/90 (28%), Gaps = 2/90 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + +R  + D +R  +   G+  ++ P L   +   K         + ++  
Sbjct: 259 GMVFWQPNGMLLRTILEDFLRKEHLKRGYQLVQGPQLLRRELWEKS-GHYTNYKENMY-F 316

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIV 103
            + +     ++             +  +  
Sbjct: 317 TEIEEDVYGIKPMNCVSHMLLYKTHLHSYR 346


>gi|320335305|ref|YP_004172016.1| Prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756594|gb|ADV68351.1| Prolyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 488

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 7/93 (7%)

Query: 369 TNNIKEMGPVLITTMDHD--SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD- 425
              I     V+I     D     +++ +     LR  G+R ++         N  KY D 
Sbjct: 287 PPEIAPHQVVIIPVFRKDNVDQMIAEAEALAGELRAQGVRVKVDKRDG--VTNGFKYNDW 344

Query: 426 -RRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             +  P+ +  G  +   G++ +K+   G E  
Sbjct: 345 ELKGVPVRMELGPRDLESGVVVVKN-RTGDEKE 376


>gi|257464982|ref|ZP_05629353.1| threonyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450642|gb|EEV24685.1| threonyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 643

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 97/346 (28%), Gaps = 5/346 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIESEVTSCIKMVYDIYSTFGFEN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G + +   +E    +   +N ++       G  Y     +       
Sbjct: 416 IAVKLSTRPENRIGDDAMWDRAEEGLANALRNNGLEYEIQEGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V+   G+  P       +G     + + + E +    
Sbjct: 476 REWQCG-TVQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+         Q   + L  AG+R +  L  ++  G +++    R  P  
Sbjct: 535 AWLAPVQAVVMNITDSQAEYVQKVVKQLSDAGLRVKADL-RNEKVGFKVREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           ++ G  E + G + ++        + +++      +++V    + +
Sbjct: 594 LVCGDKEIAEGKVSVRTRKGADLGTYKVEEFVEILKSQVRGRELKL 639



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/203 (7%), Positives = 53/203 (26%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWERTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             I +    + I  K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIESEVTSCI--------KMVYDIYSTFGFENIAVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           ++++ +  +  RA + L      
Sbjct: 425 ENRIGDDAMWDRAEEGLANALRN 447


>gi|302916831|ref|XP_003052226.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733165|gb|EEU46513.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 663

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 2/122 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            S         VL+  +  +       +  +Q LRTAGI + +   SS + G +    D 
Sbjct: 534 LSFPPTVAPTKVLLVPLSSNPQFKPLLKQLSQRLRTAGISSRVD-DSSASIGKRYSRNDE 592

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              PL I         G + ++D     ++  + +       + V +     S++ S + 
Sbjct: 593 LGTPLGITIDFQTVQDGTVTLRDRDSTSQVRADQEKIIDAIRSLV-EGEKSWSQIESELP 651

Query: 487 KI 488
           K 
Sbjct: 652 KF 653


>gi|159489562|ref|XP_001702766.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158280788|gb|EDP06545.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 579

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 39/115 (33%), Gaps = 4/115 (3%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           +D   ++ +   +    F        + ++           + PV +  +  + +     
Sbjct: 440 FDDAAAKQRPIMIHRAIFGSLERFFGILIE--NYMGAFPLWLAPVQVRLLTVNDNLAEYA 497

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                 +R AG+R E+      +    ++ A++   P+  + G  E     L ++
Sbjct: 498 HGVAAQMRKAGVRVEVV--GQASIAKLIRNAEKAKTPVICVVGNKEAESNSLAVR 550


>gi|1653092|dbj|BAA18008.1| proline-tRNA ligase [Synechocystis sp. PCC 6803]
          Length = 617

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 4/76 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   ++      G      P L+ S+ L K     D   +    
Sbjct: 51  SGLYAYLPLIWRVLEKVKRIVQEEMNRTGAQECLLPQLQPSE-LWKMSGRWDTYTESEGI 109

Query: 70  VFSLQDDDGQWISLRY 85
           +F+L+D   + + L  
Sbjct: 110 MFALRDRLERELGLGP 125


>gi|317010519|gb|ADU84266.1| prolyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 577

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 1/78 (1%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             ++  G  +      ++ ++I +      + +G   I         SL +     D+  
Sbjct: 32  IYQIGSGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYG 90

Query: 68  KGVFSLQDDDGQWISLRY 85
           K +   +D       L  
Sbjct: 91  KELLVFKDRKDNDFVLSP 108



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 25/149 (16%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + L   
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G+   +    ++ FG +++  +     LA+I G                 +    +  N 
Sbjct: 508 GVDVLLDDRDAR-FGAKMRDFELIGERLALIVGKQTLE----------SREFECIKRANL 556

Query: 464 ESWREARVAQITIPISELVSTVKKILQEN 492
           E          T+  +EL   + +IL+  
Sbjct: 557 EK--------QTLKDTELEEKILEILESE 577


>gi|297379463|gb|ADI34350.1| prolyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 577

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 83/293 (28%), Gaps = 10/293 (3%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +++    L          L+ VK L        N+ +  + +    +   ++  F+    
Sbjct: 286 IHKDKETLACFFVRGDDNLEEVKALNALNLLGANALELREASQKDLDNAGLIAGFIGPYG 345

Query: 249 EKSM---HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            K         E +K       G NE    +  V   G+ +        +          
Sbjct: 346 LKKHVSTIIFDEDLKEGDCLIVGANEKDFHAVGVDLKGFENLVYADIVQVKESDHCPNCQ 405

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +    K     +      +     + +   +   G  I      +  +  
Sbjct: 406 GALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSTILEQKS 465

Query: 366 E----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +      T N      V++ +   D           + LR  G+ A +    ++ FG ++
Sbjct: 466 DDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQKGVDALLDDRDAR-FGAKM 524

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
           +  +     LA+I G         + IK     K+  ++ +  E   E   ++
Sbjct: 525 RDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTELEEKILEMLESE 577



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|257456234|ref|ZP_05621431.1| glycyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446320|gb|EEV21366.1| glycyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 450

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/124 (11%), Positives = 34/124 (27%), Gaps = 21/124 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              + +     V +  +          Q     LR    R       +   G + +  D 
Sbjct: 343 LHFHPVIAPITVAVLPLMKKDGLAELAQDIQAELRE-DFRT--DYDQAGAIGKRYRRQDE 399

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I      +  G + ++                      + Q+ +P +EL + ++
Sbjct: 400 AGTPFCITVDYDSKEDGTVTLR------------------FRDSMDQVRVPRAELANRIR 441

Query: 487 KILQ 490
             ++
Sbjct: 442 TEIK 445


>gi|240949517|ref|ZP_04753857.1| threonyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296090|gb|EER46751.1| threonyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 643

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 97/346 (28%), Gaps = 5/346 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIESEVTSCIKMVYDIYSTFGFEN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G + +   +E    +   +N ++       G  Y     +       
Sbjct: 416 IAVKLSTRPENRIGDDAMWDRAEEGLANALRNNGLEYEIQEGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V+   G+  P       +G     + + + E +    
Sbjct: 476 REWQCG-TVQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+         Q   + L  AG+R +  L  ++  G +++    R  P  
Sbjct: 535 AWLAPVQAVVMNITDSQAEYVQKVVKQLSDAGLRVKADL-RNEKVGFKVREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           ++ G  E + G + ++        + +++      +++V    + +
Sbjct: 594 LVCGDKEIAEGKVSVRTRKGADLGTYKVEEFVEILKSQVRGRELKL 639



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/203 (7%), Positives = 53/203 (26%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWERTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             I +    + I  K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIESEVTSCI--------KMVYDIYSTFGFENIAVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           ++++ +  +  RA + L      
Sbjct: 425 ENRIGDDAMWDRAEEGLANALRN 447


>gi|240144896|ref|ZP_04743497.1| proline--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257203029|gb|EEV01314.1| proline--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 330

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 19/123 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I      L      + +         + L+  GI   ++   + + G     AD 
Sbjct: 227 IWPKSIAPWQVHLCAVRADNEEVRKFADDLYEKLQEMGIEV-IYDDRTVSAGVMFSDADL 285

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              PL +I       +G++++                      +  Q  + + E    VK
Sbjct: 286 LGIPLRVIVSPRNMKQGVVEV------------------ASRDKTLQTQVKMEEAAEQVK 327

Query: 487 KIL 489
           K L
Sbjct: 328 KYL 330


>gi|188527045|ref|YP_001909732.1| prolyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|226701297|sp|B2US70|SYP_HELPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188143285|gb|ACD47702.1| prolyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 577

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + LR  
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKN 462
           G+ A +    ++ FG +++  +     LA+I G         + IK     K+  ++ + 
Sbjct: 508 GVDALLDDRDAR-FGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTEL 566

Query: 463 NESWREARVAQ 473
            E   E   ++
Sbjct: 567 EEKILEMLKSE 577



 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|154488946|ref|ZP_02029795.1| hypothetical protein BIFADO_02255 [Bifidobacterium adolescentis
           L2-32]
 gi|154083083|gb|EDN82128.1| hypothetical protein BIFADO_02255 [Bifidobacterium adolescentis
           L2-32]
          Length = 491

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 31/102 (30%), Gaps = 2/102 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    D  +  Q     LR       +    +   G + +  D    PL +      
Sbjct: 370 VLPLSKKPDLQNVAQKLAADLRQNEW--MIDYDEAGAIGRRYRREDEIGTPLCVTVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                + I++    ++    +     +   R+ +  + + ++
Sbjct: 428 LDDQAVTIRERDTMQQERVSLDKVADYIAERIGEKRVSVPQM 469


>gi|134046484|ref|YP_001097969.1| glycyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|166227935|sp|A4FZX1|SYG_METM5 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|132664109|gb|ABO35755.1| glycyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 575

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 28/99 (28%), Gaps = 2/99 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  + +              LR  G+ AE     S   G +    D    P  +
Sbjct: 479 SPIKVGVFPLVNKEGMPEIAMDLKNKLRENGLIAE--YDDSGAIGRRYMRMDEVGTPFCV 536

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  +   + I++    ++    I     + + ++ 
Sbjct: 537 TIDGETLTDSSVTIRERDSREQFRIPINEVVPYIKDKLN 575



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++N ++++ R  Y  N GF  I++P +   + L    
Sbjct: 29 GFFDYGPLGAILKNNVINTWRKHYIVNEGFYEIDSPTVTPYEVLKASG 76


>gi|322807831|emb|CBZ05406.1| prolyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 545

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             L            V++T  +  D       +     L   GI   +     +  G + 
Sbjct: 435 DELGIVWPMETSAFKVIVTIANVKDEQQFKVGEKIYSSLVNIGIGTILDDRKERA-GVKF 493

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K AD    P+ I  G        ++IK     ++    I   +   ++
Sbjct: 494 KDADLWGIPIRITVGKN-IKENNVEIKLRNSKEKKEIPIDQLQESIKS 540


>gi|310641589|ref|YP_003946347.1| prolyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309246539|gb|ADO56106.1| Prolyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 482

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 3/119 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           ++  V I         +++       L+ AG+R +M   S  + G +    + R  P+ +
Sbjct: 293 QVIMVPIGPPKKRDAVIARADELFAELKQAGVRVKMDDRSDVSPGWKFNEYEMRGVPVRL 352

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
             G  +   G+  +     G++   +  N      A +AQ+     E+    K  ++EN
Sbjct: 353 EIGPRDMENGVCVLVSRISGEKKIVQQDNLLEEVHAMLAQV---QQEMFDRAKNFMEEN 408


>gi|300691315|ref|YP_003752310.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299078375|emb|CBJ51025.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 635

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 28/96 (29%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R    N G+  + TP +    +L +         + +F +
Sbjct: 261 GMVFWHPKGWEIWQAVEQYMRGRLSNAGYREVRTPQVMDR-TLWEHSGHWQNYKENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
            + + +  +++        +    +           
Sbjct: 319 TESEKREYAIKPMNCPGHVQIF-NHGLRSYRDLPLR 353



 Score = 39.8 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M          Q   Q L+  G RA   L  ++    +++    +  P  ++ G  
Sbjct: 540 QVVVMSIADAHAEYAQSVAQSLQKQGFRASADL-RNEKITYKIREHSLQKVPYLVVVGDK 598

Query: 439 ERSRGMLQIK 448
           ER    + ++
Sbjct: 599 ERDGNQVAVR 608


>gi|262341223|ref|YP_003284078.1| threonine--tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272560|gb|ACY40468.1| threonine--tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 424

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/111 (8%), Positives = 35/111 (31%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + + ++  + +              +      +   +   
Sbjct: 284 NEKCRPVMIHRAPFGSLERMIAIVIEHTKGNLPLWLAPNQG--VILPISDKYIVYAKKIL 341

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            ++    IR  +    ++    +++ ++ +  P  II G  E    M+ ++
Sbjct: 342 NLMLNYNIRVFVD-SRNEKINKKIRDSEEKKIPYMIILGEKEEKNEMISLR 391



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 66/237 (27%), Gaps = 13/237 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      +   +RN + + + +I +  G++ + TP + +     +      +  K  F 
Sbjct: 36  SGLPLWLPRGTILRNNLEEFLTDIQKKSGYEMVVTPHIGHKKLYIQS-GHWRKYGKDNFK 94

Query: 73  LQD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIG-PVFRNEKHGPGRFRQFI 129
                 + +   L+             +   +           P    E     R+ Q  
Sbjct: 95  PIQTPREEEEFLLKPMNCP--------HHCEVYRSQEWSYRDLPKRFAEFGTVYRYEQSG 146

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
           +        S    DA +       LE    K  +    +           +I L    K
Sbjct: 147 ELHGLTRVRSFTQDDAHIFCTYDQVLEEFK-KVINLVFYVFRCLGFSEYTVRISLRDTSK 205

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++  +   +  +K +K  L  VK    +   +       G  L     D +     +
Sbjct: 206 IDNYIGSEKNWEKAEKAILNAVKEEKIKASINYGEAAFYGPKLDFLIKDSLGRSWQL 262


>gi|253795671|ref|YP_003038767.1| putative histidyl-tRNA synthetase [Candidatus Hodgkinia cicadicola
           Dsem]
 gi|253739979|gb|ACT34314.1| putative histidyl-tRNA synthetase [Candidatus Hodgkinia cicadicola
           Dsem]
          Length = 443

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 96/457 (21%), Positives = 159/457 (34%), Gaps = 69/457 (15%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
           +  ++   +  +GFD +  P                        L+ + G    +R DLT
Sbjct: 26  VERNLMACFLGWGFDLLSAP------------------------LEVEGG----VRRDLT 57

Query: 89  APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
               R+       ++        G          GR   F Q D D  GS   ++     
Sbjct: 58  -SAVRWA---RPRVLSLLTFKFGGVKRLERHRDLGRHVHFRQFDFDVFGSRHLSSSVHTL 113

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGL 208
             ++ +   +G+ R+      N    L G+ E  G+               +DK      
Sbjct: 114 HALSSSFLMLGLARSAKLALGNVLVSL-GLCEAWGVLNLPTKRRHAQ--SVLDKGLWLEA 170

Query: 209 QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF--LSIDLEKSMHELYELVKGTIAGE 266
             +  LL  GR D SG F  G  L  +    ++S    +     S++  + +++G+ AGE
Sbjct: 171 SHLHSLLTLGRFDASGAFASGLGLGPKNASSVLSLAAPNATASASINSAFLVLEGSCAGE 230

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326
            G  EL+ +   +   G     + +   + RGL YY G V+E +       E+   V  G
Sbjct: 231 VGVRELLWVHAAMGAMGLLQ-HVVVKPLLSRGLAYYNGVVFEVVPLVAAAGERNVFVKVG 289

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
           S+ GGGRYDG    +   +    G S+G +RL+    SL     N      V        
Sbjct: 290 SLAGGGRYDGFYL-WPLCSSSCVGCSLGSTRLVDWKWSLRRRFPNPPRGVCVSWEPSLSF 348

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ------LKYADRR--NCPLAII-QGT 437
           S SL         L             +++          L+ A +R   C + +   G 
Sbjct: 349 SSSL---VRVINEL------------EARSLKPLVAAACGLRLALKRSEGCRVLVYRLG- 392

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                G   IK+L K K L   +  ++ WR   + Q+
Sbjct: 393 -----GRWLIKNLVKRKLLCCRLATSKLWRSLLIDQV 424


>gi|255035014|ref|YP_003085635.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254947770|gb|ACT92470.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 647

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 42/135 (31%), Gaps = 3/135 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F        + +++               I  +          +   
Sbjct: 514 NQKHRPVMIHRAPFGSMERFTAILIENTAGQFPLWLSPDQ--IAILPISEKFADYAEEVF 571

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+   IR  +     +  G +++ A+    P  +I G  E + G L ++   +G   S
Sbjct: 572 FQLQDHDIRGFVDH-RDEKIGRKIRDAEVTKVPFMLIVGEKEAAEGKLSVRRKGEGDLGS 630

Query: 458 REIKNNESWREARVA 472
             I+   ++ +   +
Sbjct: 631 MTIEEFAAFFKKEAS 645



 Score = 40.6 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 3/78 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS- 72
           G      K   +R R+   +       G+ P+ TP +   D         D+  K  F  
Sbjct: 267 GLPLWLPKGAMLRERLQAFLSKAQSRAGYVPVITPHIGSKDLYVTS-GHWDKYGKDSFQP 325

Query: 73  LQDDD-GQWISLRYDLTA 89
           ++  +  +   L+     
Sbjct: 326 IKTPNLDEEYMLKPMNCP 343


>gi|261203861|ref|XP_002629144.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239586929|gb|EEQ69572.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 747

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/475 (10%), Positives = 124/475 (26%), Gaps = 57/475 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R+ Y   G+  +++P +   D  + +           +F 
Sbjct: 327 GCPFLLPNGTKIFNALQKLLRSEYLKRGYQEVQSPNM--YDVGIWRQSGHWQHYKDDMFK 384

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+             +        R+YR  P+   +     R        
Sbjct: 385 L-DIEKRTWALKPMNCPG-------HAIMFGHKERSYRELPIRMADFGVLHRNEASGALH 436

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                   +  D  +       ++ +    +              +  K+    +  + +
Sbjct: 437 GLTRVRKFQQDDTHIFCTEDQIMKEIDGLFDFLRAIYGLFGFSFKL--KLSTRPEKYMGK 494

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                 A D+L          L      D   +   GA    +    +   L  + + + 
Sbjct: 495 IETWNYAEDQLRA-------ALTKFKGNDWEVEEGDGAFYGPKIDITIQDALKREFQCAT 547

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L   +      E    E    ++   K   N +                         
Sbjct: 548 IQLDYQMPVNFKLEYMTGETGAKAKPTEKPAENPDE------------------------ 583

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL-ESSTNN 371
                +  KP    +       +    R +   +             + ++         
Sbjct: 584 -KPAGDAAKPDAPPT----NSDEPGPGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFW 638

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +     +++  M   +D + + Q     L+   +  ++ +  +     +++         
Sbjct: 639 LSPRQILIVPVMPAINDYVEELQQI---LKGDKLNVDIDISGN-TMQKKIRTGQIAQYNF 694

Query: 432 AIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREARVAQITIPISELVSTV 485
             + G  E+S   + I++      +    +   E  R    A        LV+ +
Sbjct: 695 IFVVGAQEKSTRTVNIRNRDDPSSQAKGSLVPLEEARVKLRALR--KERRLVNEL 747


>gi|229545199|ref|ZP_04433924.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256853721|ref|ZP_05559086.1| prolyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|257079587|ref|ZP_05573948.1| prolyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294779463|ref|ZP_06744861.1| proline--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307270862|ref|ZP_07552149.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307287732|ref|ZP_07567775.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|307291052|ref|ZP_07570938.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|229309744|gb|EEN75731.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256710664|gb|EEU25707.1| prolyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256987617|gb|EEU74919.1| prolyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294453469|gb|EFG21873.1| proline--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306497901|gb|EFM67432.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306501470|gb|EFM70773.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306512775|gb|EFM81420.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315030982|gb|EFT42914.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 572

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E      +  P L  ++ L K     +     ++ L
Sbjct: 38  GIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAE-LWKESGRYETYGPNLYRL 96

Query: 74  QDDDGQWISLRY 85
           +D + +   L  
Sbjct: 97  KDRNDRDYILGP 108



 Score = 41.0 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +         + +  M+   +  +K  Q    M+  AG    +   + +  G + 
Sbjct: 458 DERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             AD   CP+ I  G      G++++K    G+ L    +  ES
Sbjct: 517 ADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELES 559


>gi|229549443|ref|ZP_04438168.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972147|ref|ZP_05422733.1| prolyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257421971|ref|ZP_05598961.1| prolyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|312953422|ref|ZP_07772262.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305680|gb|EEN71676.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255963165|gb|EET95641.1| prolyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257163795|gb|EEU93755.1| prolyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|310628631|gb|EFQ11914.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315152090|gb|EFT96106.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315155317|gb|EFT99333.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315159106|gb|EFU03123.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|327535671|gb|AEA94505.1| proline--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 572

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E      +  P L  ++ L K     +     ++ L
Sbjct: 38  GIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAE-LWKESGRYETYGPNLYRL 96

Query: 74  QDDDGQWISLRY 85
           +D + +   L  
Sbjct: 97  KDRNDRDYILGP 108



 Score = 41.0 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +         + +  M+   +  +K  Q    M+  AG    +   + +  G + 
Sbjct: 458 DERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             AD   CP+ I  G      G++++K    G+ L    +  ES
Sbjct: 517 ADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELES 559


>gi|212640589|ref|YP_002317109.1| glycyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212562069|gb|ACJ35124.1| Glycyl-tRNA synthetase (class II) [Anoxybacillus flavithermus WK1]
          Length = 460

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/210 (10%), Positives = 57/210 (27%), Gaps = 10/210 (4%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L +  E +R   ++ + +   S     +EY     +  + G     +          G  
Sbjct: 251 LGMKRENIRLRDHSEDELSHYSNATTDIEYKFPFGWGELWGIASRTDYDLRRHMEYSGED 310

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
             Y    +  +                +  +                ++      +   +
Sbjct: 311 FHYLDQETNERFIPYCIEPSLGADRVTLAFMIDAYEEEQLADGTTRTVMHLHPALAPYKA 370

Query: 392 KYQMYTQMLRTAGIRA---------EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                ++ L + G RA          +    S + G + +  D    P  I         
Sbjct: 371 AVLPLSKKL-SEGARAIFEQLSQHFMVDYDESGSIGKRYRRQDEIGTPFCITYDFDSEQD 429

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVA 472
            M+ ++D    ++    I   +S+ E ++ 
Sbjct: 430 QMVTVRDRDTMEQTRIPIAELKSFLEEKIQ 459


>gi|148242044|ref|YP_001227201.1| threonyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147850354|emb|CAK27848.1| Threonyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 609

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  +    + +   +     L  AGIR+ +   S +  G  ++  +++  P+  + G  
Sbjct: 506 QIRLLPVTDEVMGYAETIQSELSAAGIRSRID-RSGERLGKLIRSGEQQKIPVLAVIGAQ 564

Query: 439 ERSRGMLQIKDLAKGK 454
           E  +G L ++   +G 
Sbjct: 565 EAEQGTLSLRSRRQGD 580



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I D  R  +   G++ + TP +   D L K     D   + +F  
Sbjct: 226 GLVFWHPRGARMRLLIEDFWREAHFAGGYELLYTPHVADID-LWKTSGHLDFYRESMFGP 284

Query: 74  QDDDGQWISLRYD------LT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
              D +   L+        LT A   R   E       P R   +G V+R E+ G
Sbjct: 285 MTVDEREYQLKPMNCPFHVLTYASTLRSYKE------LPIRWAELGTVYRYERPG 333


>gi|153816280|ref|ZP_01968948.1| hypothetical protein RUMTOR_02529 [Ruminococcus torques ATCC 27756]
 gi|317502163|ref|ZP_07960339.1| proline-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088732|ref|ZP_08337642.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846463|gb|EDK23381.1| hypothetical protein RUMTOR_02529 [Ruminococcus torques ATCC 27756]
 gi|316896439|gb|EFV18534.1| proline-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407255|gb|EGG86758.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 480

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 4/113 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I    H    L K       L  AG RA++   S K+ G +    +    P  I  G  +
Sbjct: 297 IPIAQHKEGVLDKANELLDALNKAGYRAKID-DSEKSPGWKFSEQEMLGIPTRIEIGPKD 355

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
              G + +      +++   I    +     +  I    ++L +  K  L ++
Sbjct: 356 IENGQVVVVRRDTREKIVVAIDEITTKLGEILETI---QADLYAKAKAFLDDH 405


>gi|119484696|ref|ZP_01619178.1| prolyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119457514|gb|EAW38638.1| prolyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 604

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 38/106 (35%), Gaps = 7/106 (6%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  ++   +R      G +    P ++ ++ L +     D   K    
Sbjct: 37  SGIYAYLPLMWRVLQKVSQIVREEMNATGAEECLLPQVQPAE-LWQESGRWDTYTKAEGI 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +F+L+D   + ++L     ++   +A+ +  ++  +       +  
Sbjct: 96  MFALRDRRNRDLALGPTHEEVITTIAKEMIRSYQQLPLHLYQIQTK 141



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 20/128 (15%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     ++     +D+  L   +     L   GI   +   + +  G + K AD 
Sbjct: 494 IWPVAIAPYHAIITIPNINDTQQLETAENLYTQLNQVGIETLLDDRNERA-GVKFKDADL 552

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  I+ G      G ++I                     A      + + ++VS ++
Sbjct: 553 IGIPYRIVTGRS-LKSGKVEI------------------VERATHTSQEVAVEDVVSYLQ 593

Query: 487 KILQENKE 494
           K +    E
Sbjct: 594 KSIAAAVE 601


>gi|73951029|ref|XP_857141.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 2
           [Canis familiaris]
          Length = 799

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 34/116 (29%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K   V      +G    ++A+ S          + P  +  +         
Sbjct: 650 TYVSKDGDDKRNPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 709

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +      G  A++ L  S     +++ A        ++ G  E++   + ++
Sbjct: 710 ALQVSSAFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKTNNAVNVR 765



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + ++  L +        ++ +F+  D +
Sbjct: 421 FLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNM-FNSKLWETSGHWQHYSENMFTF-DIE 478

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 479 KDTFALKPMNCPGHCLMFAHR 499


>gi|315164831|gb|EFU08848.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 572

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E      +  P L  ++ L K     +     ++ L
Sbjct: 38  GIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAE-LWKESGRYETYGPNLYRL 96

Query: 74  QDDDGQWISLRY 85
           +D + +   L  
Sbjct: 97  KDRNDRDYILGP 108



 Score = 41.0 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +         + +  M+   +  +K  Q    M+  AG    +   + +  G + 
Sbjct: 458 DERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             AD   CP+ I  G      G++++K    G+ L    +  ES
Sbjct: 517 ADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELES 559


>gi|315032880|gb|EFT44812.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315150170|gb|EFT94186.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 572

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E      +  P L  ++ L K     +     ++ L
Sbjct: 38  GIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAE-LWKESGRYETYGPNLYRL 96

Query: 74  QDDDGQWISLRY 85
           +D + +   L  
Sbjct: 97  KDRNDRDYILGP 108



 Score = 41.0 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +         + +  M+   +  +K  Q    M+  AG    +   + +  G + 
Sbjct: 458 DERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             AD   CP+ I  G      G++++K    G+ L    +  ES
Sbjct: 517 ADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELES 559


>gi|257087410|ref|ZP_05581771.1| prolyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256995440|gb|EEU82742.1| prolyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|315025439|gb|EFT37371.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 572

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E      +  P L  ++ L K     +     ++ L
Sbjct: 38  GIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAE-LWKESGRYETYGPNLYRL 96

Query: 74  QDDDGQWISLRY 85
           +D + +   L  
Sbjct: 97  KDRNDRDYILGP 108



 Score = 41.4 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 8/122 (6%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPV-----LITTMDHDSDSLSKY-QMYTQMLRTA 403
            + IG+SRL+ A+    +  + I     +      +  M+   +  +K  Q    M+  A
Sbjct: 440 CYGIGVSRLLSAIVEQNADEHGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEA 499

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G    +   + +  G +   AD   CP+ I  G      G++++K    G+ L    +  
Sbjct: 500 GYEVLVDDRNERA-GVKFADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEEL 557

Query: 464 ES 465
           ES
Sbjct: 558 ES 559


>gi|257084658|ref|ZP_05579019.1| prolyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256992688|gb|EEU79990.1| prolyl-tRNA synthetase [Enterococcus faecalis Fly1]
          Length = 572

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E      +  P L  ++ L K     +     ++ L
Sbjct: 38  GIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAE-LWKESGRYETYGPNLYRL 96

Query: 74  QDDDGQWISLRY 85
           +D + +   L  
Sbjct: 97  KDRNDRDYILGP 108



 Score = 41.0 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +         + +  M+   +  +K  Q    M+  AG    +   + +  G + 
Sbjct: 458 DERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             AD   CP+ I  G      G++++K    G+ L    +  ES
Sbjct: 517 ADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELES 559


>gi|256956661|ref|ZP_05560832.1| prolyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257090544|ref|ZP_05584905.1| prolyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|300861128|ref|ZP_07107215.1| proline--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|312903702|ref|ZP_07762876.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|256947157|gb|EEU63789.1| prolyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256999356|gb|EEU85876.1| prolyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|300850167|gb|EFK77917.1| proline--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|310632894|gb|EFQ16177.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315035640|gb|EFT47572.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315578695|gb|EFU90886.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 572

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E      +  P L  ++ L K     +     ++ L
Sbjct: 38  GIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAE-LWKESGRYETYGPNLYRL 96

Query: 74  QDDDGQWISLRY 85
           +D + +   L  
Sbjct: 97  KDRNDRDYILGP 108



 Score = 41.4 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +         + +  M+   +  +K  Q    M+  AG    +   + +  G + 
Sbjct: 458 DERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMIEAGYEVLVDDRNERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             AD   CP+ I  G      G++++K    G+ L    +  ES
Sbjct: 517 ADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELES 559


>gi|227553916|ref|ZP_03983963.1| prolyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|255975215|ref|ZP_05425801.1| prolyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617163|ref|ZP_05474009.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256763073|ref|ZP_05503653.1| prolyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256961317|ref|ZP_05565488.1| prolyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256963555|ref|ZP_05567726.1| prolyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257082033|ref|ZP_05576394.1| prolyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257416590|ref|ZP_05593584.1| prolyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257419837|ref|ZP_05596831.1| prolyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|293383602|ref|ZP_06629512.1| proline--tRNA ligase [Enterococcus faecalis R712]
 gi|293387285|ref|ZP_06631842.1| proline--tRNA ligase [Enterococcus faecalis S613]
 gi|307271494|ref|ZP_07552766.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307277205|ref|ZP_07558309.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307285834|ref|ZP_07565968.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|312899806|ref|ZP_07759125.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312906152|ref|ZP_07765164.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909497|ref|ZP_07768352.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|227176902|gb|EEI57874.1| prolyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|255968087|gb|EET98709.1| prolyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256596690|gb|EEU15866.1| prolyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256684324|gb|EEU24019.1| prolyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256951813|gb|EEU68445.1| prolyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954051|gb|EEU70683.1| prolyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256990063|gb|EEU77365.1| prolyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257158418|gb|EEU88378.1| prolyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257161665|gb|EEU91625.1| prolyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|291079114|gb|EFE16478.1| proline--tRNA ligase [Enterococcus faecalis R712]
 gi|291083322|gb|EFE20285.1| proline--tRNA ligase [Enterococcus faecalis S613]
 gi|295113413|emb|CBL32050.1| prolyl-tRNA synthetase, family II [Enterococcus sp. 7L76]
 gi|306502595|gb|EFM71862.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306506135|gb|EFM75301.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306511766|gb|EFM80764.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|310627798|gb|EFQ11081.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290170|gb|EFQ68726.1| prolyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311293056|gb|EFQ71612.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315146006|gb|EFT90022.1| prolyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315146660|gb|EFT90676.1| prolyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315161730|gb|EFU05747.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315166430|gb|EFU10447.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315170318|gb|EFU14335.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315173646|gb|EFU17663.1| prolyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315574384|gb|EFU86575.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315580142|gb|EFU92333.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 572

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E      +  P L  ++ L K     +     ++ L
Sbjct: 38  GIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAE-LWKESGRYETYGPNLYRL 96

Query: 74  QDDDGQWISLRY 85
           +D + +   L  
Sbjct: 97  KDRNDRDYILGP 108



 Score = 41.0 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +         + +  M+   +  +K  Q    M+  AG    +   + +  G + 
Sbjct: 458 DERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             AD   CP+ I  G      G++++K    G+ L    +  ES
Sbjct: 517 ADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELES 559


>gi|148241975|ref|YP_001227132.1| prolyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166980166|sp|A5GSC0|SYP_SYNR3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147850285|emb|CAK27779.1| Prolyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 600

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 38/107 (35%), Gaps = 2/107 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I     V++     ++  +   +     L+ AG+   +   + +  G + K A+  
Sbjct: 492 WPVPIAPFEVVIVIASSKEAQQVELAEDLYGQLQQAGVDVLLDDRNERA-GVKFKDAELI 550

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             P  ++ G      G +++ +   G++     ++  +     + Q 
Sbjct: 551 GIPWRLVVG-RGAVNGQVELVERCSGEKQEGPHQDLMAQLLQTLDQQ 596



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 2/75 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         R+  ++   +R   +  G      P L+ ++   +             +
Sbjct: 37  SGIYAYLPLMWRVLRKVSAIVRQEMDAAGALETLLPQLQPAELWQRSGRWSGYTAGEGIM 96

Query: 71  FSLQDDDGQWISLRY 85
           F LQD   + + L  
Sbjct: 97  FHLQDRQDRELGLGP 111


>gi|29376876|ref|NP_816030.1| prolyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227519897|ref|ZP_03949946.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|81838863|sp|Q831W7|SYP_ENTFA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118138617|pdb|2J3L|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With A Prolyl-Adenylate Analogue
           ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine)
 gi|118138618|pdb|2J3L|B Chain B, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With A Prolyl-Adenylate Analogue
           ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine)
 gi|118138619|pdb|2J3M|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With Atp, Manganese And Prolinol
 gi|118138620|pdb|2J3M|B Chain B, Prolyl-Trna Synthetase From Enterococcus Faecalis
           Complexed With Atp, Manganese And Prolinol
 gi|29344341|gb|AAO82100.1| prolyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227072691|gb|EEI10654.1| prolyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 572

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++   +R  +E      +  P L  ++ L K     +     ++ L
Sbjct: 38  GIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAE-LWKESGRYETYGPNLYRL 96

Query: 74  QDDDGQWISLRY 85
           +D + +   L  
Sbjct: 97  KDRNDRDYILGP 108



 Score = 41.0 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                +         + +  M+   +  +K  Q    M+  AG    +   + +  G + 
Sbjct: 458 DERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             AD   CP+ I  G      G++++K    G+ L    +  ES
Sbjct: 517 ADADLIGCPIRITVGKKAV-DGVVEVKIKRTGEMLEVRKEELES 559


>gi|66809557|ref|XP_638501.1| glycyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60467108|gb|EAL65146.1| glycyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 678

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 6/107 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGT 437
           I  +          Q  ++ L+ A I  ++    +   G   KYA  D    P  +    
Sbjct: 567 ILPLTSSDRIAPFVQTISKALKEANISTKVDDTGNA-IGR--KYARTDEIGVPFGVTIDF 623

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                  + +++    K++   I    S        +T+  S+++ T
Sbjct: 624 QTVEDNTVTLRERDTTKQVRIPISELASTLRKLCD-LTVSWSDILKT 669


>gi|239608840|gb|EEQ85827.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 747

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/475 (10%), Positives = 124/475 (26%), Gaps = 57/475 (12%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R+ Y   G+  +++P +   D  + +           +F 
Sbjct: 327 GCPFLLPNGTKIFNALQKLLRSEYLKRGYQEVQSPNM--YDVGIWRQSGHWQHYKDDMFK 384

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
           L D + +  +L+             +        R+YR  P+   +     R        
Sbjct: 385 L-DIEKRTWALKPMNCPG-------HAIMFGHKERSYRELPIRMADFGVLHRNEASGALH 436

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
                   +  D  +       ++ +    +              +  K+    +  + +
Sbjct: 437 GLTRVRKFQQDDTHIFCTEDQIMKEIDGLFDFLRAIYGLFGFSFKL--KLSTRPEKYMGK 494

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                 A D+L          L      D   +   GA    +    +   L  + + + 
Sbjct: 495 IETWNYAEDQLRA-------ALTKFKGNDWEVEEGDGAFYGPKIDITIQDALKREFQCAT 547

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            +L   +      E    E    ++   K   N +                         
Sbjct: 548 IQLDYQMPVNFKLEYMTGETGAKAKPTEKPAENPDE------------------------ 583

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL-ESSTNN 371
                +  KP    +       +    R +   +             + ++         
Sbjct: 584 -KPAGDAAKPDAPPT----NSDEPGPGRARPVVIHRAIIGSFERFFGIIIEHFGGKWPFW 638

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
           +     +++  M   +D + + Q     L+   +  ++ +  +     +++         
Sbjct: 639 LSPRQILIVPVMPAINDYVEELQQI---LKGDKLNVDIDISGN-TMQKKIRTGQIAQYNF 694

Query: 432 AIIQGTGERSRGMLQIKDLAK-GKELSREIKNNESWREARVAQITIPISELVSTV 485
             + G  E+S   + I++      +    +   E  R    A        LV+ +
Sbjct: 695 IFVVGAQEKSTRTVNIRNRDDPSSQAKGSLVPLEEARVKLRALR--KERRLVNEL 747


>gi|156937156|ref|YP_001434952.1| prolyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|172044461|sp|A8A9E3|SYP_IGNH4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|156566140|gb|ABU81545.1| prolyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 478

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 79/244 (32%), Gaps = 15/244 (6%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G    P    ++R  +L+ IR++ ++ G + +  P+L     L K           V
Sbjct: 29  PVKGMGVWPPFGFKLRKLVLNIIRDLLDSTGHEEVLFPVLIPKTLLEKESEHIRGFEGEV 88

Query: 71  FSLQDDDGQW-----ISLRYDLTAPLARYVAENFD---TIVFPCRTYRIGPVFRNEKHGP 122
           F      G       ++LR   T+  A    E+F        P + Y+I PV+R E    
Sbjct: 89  F-WVTKGGHEDLDVPLALRP--TSETAISYMESFWISSYKQLPMKLYQIVPVYRYETKAT 145

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND--YHIGINNRKILDGILE 180
               +  +        +A  +        A+ +E      +       I+ R   D    
Sbjct: 146 RPLIRLREVSTFKEAHTAHESFEGADSQCAEAIEIYKKVFDRLGIPYMISQRPPWDKFAG 205

Query: 181 KIGLHGDDKLNERLIVLRA--IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            +     D +     VL+   +  L +      ++       D    +     L+   I 
Sbjct: 206 ALYTVAFDTVMPDGRVLQIGTVHHLGQNFSVPFEVRFHTEDGDKDYVWQTSYGLSDRVIA 265

Query: 239 IMVS 242
            +V+
Sbjct: 266 SLVA 269


>gi|148381445|ref|YP_001255986.1| putative prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           3502]
 gi|153934131|ref|YP_001385820.1| putative prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           19397]
 gi|153935851|ref|YP_001389227.1| putative prolyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148290929|emb|CAL85065.1| prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152930175|gb|ABS35675.1| putative prolyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           19397]
 gi|152931765|gb|ABS37264.1| putative prolyl-tRNA synthetase [Clostridium botulinum A str. Hall]
          Length = 545

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             L            V++T  +  D       +     L   GI   +     +  G + 
Sbjct: 435 DELGIVWPMETSAFKVIVTIANVKDEQQFKVGEKIYSSLVNIGIGTILDDRKERA-GVKF 493

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K AD    P+ I  G        ++IK     ++    I   +   ++
Sbjct: 494 KDADLWGIPIRITVGKN-IKENNVEIKLRNSKEKKEIPIDQLQESIKS 540


>gi|57167588|ref|ZP_00366728.1| prolyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020710|gb|EAL57374.1| prolyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 569

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G  +      R+ ++I   ++   +  G   +    +  + +L +     +   K 
Sbjct: 35  QIGSGLYNFLPLGKRVLDKIRTIVKEEMDKAGAQEVNLSFVTPA-TLWQESGRYNVFGKE 93

Query: 70  VFSLQDDDGQWISLRY 85
           +   +D       L  
Sbjct: 94  LLRFKDRKENDFVLGP 109



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 2/106 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +      +I +   D  SL       + L  AGI   +   + + FG ++   + 
Sbjct: 466 IWNKTLAPFTLEIIISNIKDEKSLEFATKLYEDLSNAGIEVLLDDRNER-FGVKMNDFEL 524

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P A++ G G   +  L+  D    ++     K    + +  + 
Sbjct: 525 MGFPYALVVGKG-LEKDELEFIDRKTLEKKIISSKEAFDFIKKSIE 569


>gi|325953928|ref|YP_004237588.1| glycyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323436546|gb|ADX67010.1| glycyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 511

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 25/92 (27%), Gaps = 8/92 (8%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   + LR       +      + G + +  D    P  I           + ++    
Sbjct: 427 AEEIVRKLR---YDFNVMYEEKDSIGKRYRRMDAIGTPFCITVDHDSLKDNTVTLRHRDT 483

Query: 453 GKELSREIKNNESWREARVAQITIPISELVST 484
            ++    I +  +  +A      + I  L   
Sbjct: 484 MEQKRVAISDLPAIIDA-----EVNIKNLFDK 510


>gi|260434317|ref|ZP_05788287.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412191|gb|EEX05487.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 611

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +    +     +     L  AG+RA +     +  G  ++  ++   P+  + G  
Sbjct: 509 QVRLLPVTDEVQPYAEQVLDQLTKAGVRATIDRSGDR-LGKLIRTGEQIKIPVLAVIGAK 567

Query: 439 ERSRGMLQIKDLAKGK 454
           E  +  + ++    G 
Sbjct: 568 EAEQNAVSLRSRRDGD 583



 Score = 41.0 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 2/109 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+R  I +  R  +   G++ + TP +    SL K     D   + +F  
Sbjct: 229 GLVFWHPRGARMRLLIEEFWRQAHFEGGYELLYTPHVADI-SLWKTSGHLDFYAESMFGP 287

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
            + D +   L+           A    +    P R   +G V+R E+ G
Sbjct: 288 MEVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYERPG 336


>gi|254474756|ref|ZP_05088142.1| prolyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214028999|gb|EEB69834.1| prolyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 450

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/109 (8%), Positives = 33/109 (30%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++  +I   +       G  P+    ++ +D L +     D  
Sbjct: 31  MIKQSAAGIYSWLPLGFKVLKKIEGIVHEEQMRAGHIPMLMSTMQPAD-LWRESGRYDDY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            + +  ++D   + +       ++   + R    ++  +       +  
Sbjct: 90  GQEMLRIKDRHDRDMLFGPTNEEMITDIFRNHVSSYKDLPLTMYQVQWK 138



 Score = 36.7 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 29/95 (30%), Gaps = 1/95 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +      ++     D  +    +   + L  AG+   ++   ++  G +    D 
Sbjct: 338 IWPEGVTPFHCGIVNLKQGDEAADGACEDLYKALVAAGLD-PLYDDRNERAGGKFATMDL 396

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  I  G      G++++     G+      +
Sbjct: 397 IGLPWRITVGPRGLKNGVVELTSRRTGESEELAPE 431


>gi|116179548|ref|XP_001219623.1| hypothetical protein CHGG_00402 [Chaetomium globosum CBS 148.51]
 gi|88184699|gb|EAQ92167.1| hypothetical protein CHGG_00402 [Chaetomium globosum CBS 148.51]
          Length = 716

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 51/480 (10%), Positives = 121/480 (25%), Gaps = 81/480 (16%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +RI N I+D IR  Y    +D + TP + ++ SL +         + +F L D D
Sbjct: 288 WLPHGMRINNAIMDYIREEYWKRDYDEVMTPNM-FNVSLWEQSGHLAHYKEDMF-LLDVD 345

Query: 78  GQWISLRYDLTAP-------LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
            +   L+             LA +   + +          +  V R ++     F +  Q
Sbjct: 346 KEQFGLKPMNCPGHKELPLRLADFGVLHRNEASG--ALSGLTRVRRFQQDDAHIFCREDQ 403

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
              +        +     + +   L  +  + + +   I+     +  L++         
Sbjct: 404 IKEEVADLFDFMSSFYGMLGLTFKL-KLSTRPDKFMGEISTWDSAEARLKEALNEFAAAN 462

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE--QIDIMVSFLSIDL 248
                 L A D         + +L          DF +  N + E    + +        
Sbjct: 463 EGVTWELNAGDGAFYGPKVDIAVLRQWQCATIQLDFQQPINFSLEYQTAESVQKDKKDAA 522

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
                    +      G     +     +                 ++      +   + 
Sbjct: 523 PAPAPAPAPVPAPVPDGTAEEKKDGREKKKPLLVKKPLAPGCARPVMIHRAMAGSIERFT 582

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
           AIL                    G++   +S  +   +P     +G ++ + AL   E  
Sbjct: 583 AILAEHF---------------AGKWPYWMSPRQVIVIPVGMGFLGYAKEVAALLKKERF 627

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
                                                  ++   S      +++      
Sbjct: 628 H-------------------------------------VDVD-SSGNTLQKKIRNGQLAQ 649

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                + G  E     + I+                     +   + + + + +  ++K+
Sbjct: 650 YNFCFVVGDDEMRNRKVNIRYRDD--------------TSTQARDVPVDLEDAIEKLRKL 695


>gi|328866339|gb|EGG14724.1| threonyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 706

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI N++++ IR  Y   GF  + TP + +S SL +      + ++ +F +
Sbjct: 332 GCTFFLPHGTRIYNKLVEFIRFEYHRRGFSEVITPTM-FSQSLWEQSGHWAKYSENMFPV 390

Query: 74  Q-DDDGQWISLRYDLTAPLARYVAENFDTIV 103
           + D+     S++           A    +  
Sbjct: 391 KCDNSN--YSMKPMNCPGHCLMFASRSRSYR 419



 Score = 43.3 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 10/114 (8%), Positives = 32/114 (28%), Gaps = 3/114 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D      +   +           + + ++               +I  +    +      
Sbjct: 569 DKAEDLQRPVIIHRAILGSVERMMAILIEHTGGKWPFWVSPRQAIIVPVSQQFN--EYAD 626

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              + +  AG   ++  GS K    +++ A        ++ G  E+    + ++
Sbjct: 627 QLQKKIVDAGFYCDVD-GSDKTLPKKVREAQLAQYNYILVVGQKEKDENTVGVR 679


>gi|91774018|ref|YP_566710.1| pyrolysyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|118573260|sp|Q12UB6|PYLS_METBU RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|91713033|gb|ABE52960.1| Pyrrolysyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 416

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 56/134 (41%), Gaps = 9/134 (6%)

Query: 28  RILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDDDGQWISLRYD 86
           ++   I   + + GF  I++P++   + + +   D +D  NK +F +     + + LR  
Sbjct: 207 KLERDITEFFVDRGFLEIKSPIMIPFEYIERMGIDKDDHLNKQIFRV----DESMCLRPM 262

Query: 87  LTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA 145
           L AP         D  +  P R + IGP +R E  G     +F    V+     +     
Sbjct: 263 L-APCLYNYLRKLDKVLPDPIRIFEIGPCYRKESDGSSHLEEFTM--VNFCQMGSGCTRE 319

Query: 146 EMCMMMADTLEAVG 159
            M  ++ + LE +G
Sbjct: 320 NMEALIDEFLEHLG 333


>gi|37526560|ref|NP_929904.1| threonyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|73919813|sp|Q7N3P6|SYT_PHOLL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|36785991|emb|CAE15043.1| threonyl-tRNA synthetase (threonine--tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 642

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 84/316 (26%), Gaps = 5/316 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y +   N      I  +      D      
Sbjct: 297 FMMDRVMWERTGHWENYGEHMFTTSSENREYCVKPMNCPGHIQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIHREVSSCIKMVYDVYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G  E    +E    +    N ++       G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGTEEQWNQAEESLAAALQENGVQFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYVGENNERKVPVMIHRAVLGSLERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P  +  M+         Q   + L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWIAPQQVVVMNITDSQADYVQELVKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIK 448
           ++ G  E   G + ++
Sbjct: 594 LVCGEKEVESGKVSVR 609


>gi|328855773|gb|EGG04898.1| hypothetical protein MELLADRAFT_37217 [Melampsora larici-populina
           98AG31]
          Length = 687

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/113 (8%), Positives = 32/113 (28%), Gaps = 3/113 (2%)

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
               R +   +             +  +                +  +   +   +  Q 
Sbjct: 541 DQGERKRPVMIHRAIMGSVERFTAILTEHFGGKWPFWLSPRQ--VLVIPVAATHKAYAQE 598

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             Q L  AG+ A+  +  +     +++  +  +    I+ G+ E     + ++
Sbjct: 599 VAQKLWDAGLYADADMTDA-TLPKKIRNGEVSSYNFIIVVGSEEVESRSVNVR 650



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +++ +++ Y   G+D + +P + Y+  L       +  ++ +F L+ + 
Sbjct: 306 WLPHGTRIYNTLVEFLKSEYRKRGYDEVISPNM-YNSKLWNTSGHWENYSENMFKLEIEK 364

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 365 -ETFALKPMNCPG 376


>gi|255071725|ref|XP_002499537.1| predicted protein [Micromonas sp. RCC299]
 gi|226514799|gb|ACO60795.1| predicted protein [Micromonas sp. RCC299]
          Length = 722

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             + A+ +   +      + P  +  +     S         +LR  G   E+   S + 
Sbjct: 568 ERMFAILTEHFAGKWPFWLSPRQVMIVPISEQSRDYAHEVRSVLRKEGFYCEVD-DSDRK 626

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +++ A        ++ G GE++   + I+
Sbjct: 627 MQKKVREAQLEQWNYILVVGEGEKTNRTVNIR 658



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  +I N++++ IR  Y  Y +D + TP +   D L K         + +FS  D +
Sbjct: 316 FLPQGAKIYNKLMEFIREKYWEYEYDEVITPNVYNFD-LWKTSGHAAHYKENMFSF-DVE 373

Query: 78  GQWISLRYDLTAP 90
                L+      
Sbjct: 374 KAEFGLKPMNCPG 386


>gi|167948462|ref|ZP_02535536.1| threonyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 170

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+         +   + LR AG R E  L  ++  G +++       P  +
Sbjct: 69  WLSPVQVVVMNITDRQAKYAENSVKALREAGFRVESDL-RNEKIGFKIREHTLMRVPYLL 127

Query: 434 IQGTGERSRGMLQIK 448
           + G  E  +G L ++
Sbjct: 128 VVGDREMEQGSLAVR 142


>gi|77554944|gb|ABA97740.1| Bifunctional aminoacyl-tRNA synthetase, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 489

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 61/178 (34%), Gaps = 24/178 (13%)

Query: 324 VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTM 383
            F    G G                   +    +   ++    S     + +G V++ T 
Sbjct: 240 AFIPNTGRGVQGATSHCLGQNFAKMFDITFENDKGSRSMVWQNSWAYTTRSIG-VMVMTH 298

Query: 384 DHDSDS-----LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
             D D      +++ +   + L  AGIRA++    + + G +  + + +  PL I  G  
Sbjct: 299 GDDKDVDTTAIVNECKKTVETLEKAGIRADLDTRENYSPGWKYSHWEMKGVPLRIEIGPK 358

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           + +    ++                   R    A+  IP ++LV  V  +L E ++ +
Sbjct: 359 DMANNQARV------------------VRRDNGAKADIPTADLVEKVNGLLDEVQKNL 398


>gi|13508093|ref|NP_110042.1| glycyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2500997|sp|P75425|SYG_MYCPN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|1674173|gb|AAB96130.1| glycyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|301633466|gb|ADK87020.1| glycine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 449

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 10/99 (10%)

Query: 379 LITTMDHDSDSLSKYQMYTQML----RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
            I  +   +      Q   + L       G        S+ + G + + AD      AI 
Sbjct: 355 QIVVLPLVNKLKETAQTLFEALSQTHWRIGF------ESAGSIGKRYRKADAIGTKFAIT 408

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
                     + I++    K++   IK  ++W      Q
Sbjct: 409 FDFESLEDQAVTIRERDSLKQVRVPIKELKAWFAQHDDQ 447


>gi|197303356|ref|ZP_03168396.1| hypothetical protein RUMLAC_02079 [Ruminococcus lactaris ATCC
           29176]
 gi|197297640|gb|EDY32200.1| hypothetical protein RUMLAC_02079 [Ruminococcus lactaris ATCC
           29176]
          Length = 478

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/231 (6%), Positives = 58/231 (25%), Gaps = 11/231 (4%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +            ++      + V   +  ++     ++       +    +        
Sbjct: 250 EWFDYWKNFCLNWLSSLGLKEDEVRYRDHDKEELSFYSKATTDVEFLFPFGWGELWGIAD 309

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +       +       +  +      ++ A    +         +++ +  
Sbjct: 310 RTDYDLTQHQNVSGQDLTYFDDETKEKYIPYVIEPSLGADRMVLAFLCSAYDEENIGTEE 369

Query: 370 --------NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                   +    + PV I  +          +     L       E       N G + 
Sbjct: 370 KPDMRTVLHFHPALAPVKIGVLPLSKKLNEGAEKVYTELCKY-YNCEFD--DRGNIGKRY 426

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +  D    P  +         G + ++D    ++   +I++ +++ E +  
Sbjct: 427 RRQDEIGTPFCVTYDFDSEEDGAVTVRDRDTMEQERVKIEDLKAYFEKKFE 477


>gi|148377533|ref|YP_001256409.1| glycyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291579|emb|CAL58965.1| Glycyl tRNA synthetase (Glycine tRNA ligase) [Mycoplasma agalactiae
           PG2]
          Length = 458

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/96 (11%), Positives = 26/96 (27%), Gaps = 2/96 (2%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P     +        K +   + L    I   +    + + G + +  D    P  I   
Sbjct: 365 PYKFAILPLVKKLNEKAEEIYKQLLKLNIP--ITYDDAGSIGKRYRRQDSIGTPYCITID 422

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +   + I++     +    I N   + +    
Sbjct: 423 YDSLNDECITIRNRDSMSQERISISNLYEFAQKTFK 458


>gi|84999162|ref|XP_954302.1| glycyl-tRNA synthetase  [Theileria annulata strain Ankara]
 gi|65305300|emb|CAI73625.1| glycyl-trna synthetase, putative [Theileria annulata]
          Length = 796

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/109 (9%), Positives = 31/109 (28%), Gaps = 5/109 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    + N         +  +                LR  GI  ++   +  + G   +
Sbjct: 668 ERKYVALNKSIAPTKCSVLPLSSKEVFEPLITRVQAHLRRLGISHKVD-KTGASIGK--R 724

Query: 423 YA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           YA  D    P  +       +   + +++    +++  ++ +       
Sbjct: 725 YARTDEIGIPFCVTLDFQSVNDDTVTLRERDTMQQVRIKLDDLGELINN 773


>gi|330720856|gb|EGG99050.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 639

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/346 (11%), Positives = 91/346 (26%), Gaps = 15/346 (4%)

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
              +    R  +H  G         VD           +    M  +             
Sbjct: 274 YQTVEQYMRKVQHDNGYQEIKTPQLVDFSLWERSGHADKFGDEMFSSHSENKDYAVKPMN 333

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              + ++ +  L         +L E     R        GL  V+        D++  F 
Sbjct: 334 CPCHVQVFNQGLRSY-RDLPLRLAEFGCCHRNEPSGTLQGLMRVRG----FVQDDAHIFC 388

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
             + +  E    +    S+  +    ++   +        G +E+   +E   +   ++ 
Sbjct: 389 AESQIQDEVASFIDLLYSVYQDFGFDDVLVKLSTRPEKRVGSDEVWDKAEEALQLALDNK 448

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
            I        G  Y     +        + +    +       G      V+    + VP
Sbjct: 449 GIAWELQPGEGAFYGPKIEFSLRDCLGRVWQCG-TIQVDFSMPGRLDAQYVAEDGSRQVP 507

Query: 348 AT---GFSIGISRLIVALKSL--ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT 402
                       R I  L      +    +      ++   D  ++     +   + LR 
Sbjct: 508 VMLHRAILGSFERFIGILIEHFAGAFPAWLAPEQAAIVNITDSQAE---YCRNVEKTLRN 564

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            G R       ++  G +++    +  P  ++ G  E   G + ++
Sbjct: 565 KGFRV-FSDLRNEKIGFKIREHSIQKIPYVLVVGDKEMEAGQIAVR 609



 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 44/152 (28%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R +  + G+  I+TP L       +     D+    +FS 
Sbjct: 262 GMVFWHAKGWSIYQTVEQYMRKVQHDNGYQEIKTPQLVDFSLWERS-GHADKFGDEMFSS 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             ++ +  +++        +   +   +                 +              
Sbjct: 321 HSEN-KDYAVKPMNCPCHVQVFNQGLRSYRDLPLRLAEFGCCHRNEPSGTLQGLMRVRGF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +    A++++   +A  ++ +     D+
Sbjct: 380 VQDDAHIFCAESQIQDEVASFIDLLYSVYQDF 411


>gi|254796675|ref|YP_003081511.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589907|gb|ACT69269.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 647

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/392 (9%), Positives = 95/392 (24%), Gaps = 12/392 (3%)

Query: 98  NFDTIVFPCRTYRIG-----PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           +          +         V  N      +   + +     V S      +       
Sbjct: 257 HLQEEAQGQVFWHENGFLLYRVLENYIRSKLKAHDYREVKTPVVYSKCLWERSGHWSKFK 316

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           + +  +     ++ +   N      + ++      D                   L G+ 
Sbjct: 317 ENMFVIRSDDGEFSLKPMNCPAHIEVFKQSLKSYRDLPLRLAEFGMCHRNEASGALHGL- 375

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +  E +        +  +    E+            G +E 
Sbjct: 376 MRVRGFVQDDAHIFCTPEQICDETVAFCELLKEVYRDLGFTEVEVRFSDRPEVRLGNDET 435

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVG 329
              +E+  KS  +   +  +     G  Y     +  +       +        V     
Sbjct: 436 WDKAEIALKSAMDKAGLVYTLNPGEGAFYGPKIEFVLVDALKRKWQCGTLQVDFVLPERL 495

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
                D    +     +           L + ++  +           V + T+    + 
Sbjct: 496 DATYIDHEGKKQHPVMLHRAILGTFERFLGILIEHYDGKFPLWLAPTQVAVLTITEKVE- 554

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
               +     L   GIRA     + +    +++Y   R  P+  I G  E     + ++ 
Sbjct: 555 -EYAKSLLNHLSKTGIRAVSDFSNQR-IDYKIRYHTTRRVPILWIIGRIEEKNNSVTVRR 612

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISEL 481
           +   +   + +               I  + +
Sbjct: 613 MGSSESEVKTVDTALDDILGEFNVRQISSTNI 644



 Score = 40.2 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 25  IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
           +   + + IR+  + + +  ++TP++ YS  L +      +  + +F ++ DDG+  SL+
Sbjct: 275 LYRVLENYIRSKLKAHDYREVKTPVV-YSKCLWERSGHWSKFKENMFVIRSDDGE-FSLK 332

Query: 85  YDLTA 89
                
Sbjct: 333 PMNCP 337


>gi|327288851|ref|XP_003229138.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 706

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 41/141 (29%), Gaps = 2/141 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I   ++D I++ Y   GF  + TP + ++  L +         + +FS +  +
Sbjct: 350 FLPKGAHIYTTLVDFIKSEYLKRGFSEVITPNI-FNSKLWETSGHWQHYEENMFSFR-LE 407

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G+  +L+                +            V    +                  
Sbjct: 408 GETFALKPMNCPGHCLMFGHRPRSWRELPLRLADFGVLHRNEPSGALSGLTRVRRFQQDD 467

Query: 138 SSAETADAEMCMMMADTLEAV 158
           +    A  ++   +   L+ +
Sbjct: 468 AHIFCAMDQLEGEIRSCLDFL 488



 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 34/116 (29%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y         + V      +G    ++A+ +          + P  I  +    D+ S 
Sbjct: 553 SYTSKEGATPERPVMIHRAVLGSVERMMAVLAENYGGKWPFWLSPSQIMVIPVGPDAESY 612

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                Q    AG   ++ L        +++ A         + G  E S   L ++
Sbjct: 613 AHEIHQTFHQAGFTTDVDLDPGTTLNRKIRNAQLAQYNFQFVVGRKEMSNRTLNVR 668


>gi|308189939|ref|YP_003922870.1| threonine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319777220|ref|YP_004136871.1| threonyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|238809889|dbj|BAH69679.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|307624681|gb|ADN68986.1| threonine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318038295|gb|ADV34494.1| Threonyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 582

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/408 (8%), Positives = 94/408 (23%), Gaps = 31/408 (7%)

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
            +  A +             G    NE       +   +     V +    ++       
Sbjct: 190 MKIFAMHPLCGQGFPIWLEDGMYIHNEI-KNLVLKMDRKYGFTEVLTPHFGSEDLYKTSG 248

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
                   +                     I  +  +K + R + +R  ++   +  +  
Sbjct: 249 HLAHYKDDMFAPLVIENERLIPRPMTCPHHIVCYNLEKRSYRDLPIRYSEQSQLYRYEKS 308

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
             L G  R            +  +QI+  +  +   +E+++      +       +  N+
Sbjct: 309 GALTGLERVRGMLLTEGHLFVREDQIEQEIKSMYQLIEETLKIFNIDISYISLSLRDKND 368

Query: 272 LVVISELVRKSG-----------YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
                   +                  +                   +  LG  +     
Sbjct: 369 KEKYFNDNKMWNSAEKMLKKALDDMGVKYTTVVGEAAFYGPKIDIQIDTALGHEITVSTI 428

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
           +            Y     +     +   G      R +  L                + 
Sbjct: 429 QLDFLQPKNFDITYTDKNGKEARPVMIHRGLIGTYERFVAILLEQTKGNLPFWLAPKQIT 488

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
               + +++L   +     L     R ++     +    +++ A        +I G  E 
Sbjct: 489 IIPVNLNENLDYSRNIFNRLWNCNFRVKIDDRDER-LNKKIREAQMSKSKYQVILGANEE 547

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
               +  +    GKE +                 T+ + E ++ + K+
Sbjct: 548 KDKTISYR--EYGKEDT----------------KTVTVEEFINILTKL 577



 Score = 41.4 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 4/110 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + I N I + +  +   YGF  + TP     D   K           +F+ 
Sbjct: 202 GFPIWLEDGMYIHNEIKNLVLKMDRKYGFTEVLTPHFGSEDLY-KTSGHLAHYKDDMFAP 260

Query: 74  QDDDGQWISLRYDLTAP--LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
              + + +  R  +T P  +  Y  E       P R      ++R EK G
Sbjct: 261 LVIENERLIPRP-MTCPHHIVCYNLEKRSYRDLPIRYSEQSQLYRYEKSG 309


>gi|152978995|ref|YP_001344624.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704313|sp|A6VNZ2|SYT_ACTSZ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150840718|gb|ABR74689.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 643

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 95/350 (27%), Gaps = 13/350 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYGTFGFTD 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N ++       G  Y     +       
Sbjct: 416 IAVKLSTRPEKRIGADEMWDRAEQGLANALKHNALEYEIQEGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    +       G      V+    +  P       +G     + + + E +    
Sbjct: 476 REWQCG-TIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ---LKYADRRN 428
             + PV    M+         Q   + L  AG+R +  L + K  F  +   L+      
Sbjct: 535 AWLAPVQAVVMNITDSQAEYVQKVVKQLSDAGLRVKADLRNEKVGFKVREHTLRR----- 589

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            P  ++ G  E + G + ++        + ++++     + +V    + +
Sbjct: 590 VPYMLVCGDKEIAEGKVSVRTRRGTDLGTYDVEDFIEILKQQVRGRELKL 639



 Score = 40.2 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 11/167 (6%), Positives = 40/167 (23%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTVFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 GDLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   +  V      +       K
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYGTFGFTDIAVK 419


>gi|313838644|gb|EFS76358.1| glycyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
          Length = 506

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +SD   K +     LR      +     ++  G + +  D    P  I      
Sbjct: 415 VLPLSRNSDLSPKARDLAARLREH-WNVDFD--DAQAIGKRYRRQDEIGTPFCITVDFDS 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++     +    I   E +   +
Sbjct: 472 LEDDAVTIRERDTMAQQRVSIDKVEEYLGGK 502


>gi|258649081|ref|ZP_05736550.1| glycine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850716|gb|EEX70585.1| glycine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 513

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/266 (8%), Positives = 56/266 (21%), Gaps = 29/266 (10%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+    E    E+   VK     E          +  +  G+ +   +           
Sbjct: 256 QFIFRMREFEQMEMQFFVKPGTEHEWFNRWKEWRMKWHQALGFGAECYRFHDHEKLAHYA 315

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGG--------RYDGLVSRFKGQNVPATGFSI 353
                 E  + F     +                     +Y    +              
Sbjct: 316 NAATDIEFKMPFGFKEVEGIHSRTDYDLRRHEEFSGKSIKYFDPETNESYTPYDIETSIG 375

Query: 354 GISRLIVALKSLESSTNNIKEMGPVL-------------ITTMDHDSDSLSKYQMYTQML 400
                +  +    +          V+             +  +        K +     L
Sbjct: 376 VDRMFLSVMCHAYTEEKLDNGETRVVLRLPAALAPVKLAVLPLVRKDGLPEKAREIMNEL 435

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
                  +         G + + AD    P  I           + ++D     +    +
Sbjct: 436 -KFHFNCK--YEEKDTIGKRYRRADAIGTPYCITIDHDTLKENTVTLRDRDTMTQERVPV 492

Query: 461 KNNESWREARVAQITIPISELVSTVK 486
           +   +  E +     + I+ L+  ++
Sbjct: 493 EQLRALIEDK-----VSITSLLKQLQ 513


>gi|163740958|ref|ZP_02148351.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385949|gb|EDQ10325.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 648

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 79/268 (29%), Gaps = 25/268 (9%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F     + SE    +     +  +   H+    +        G +E   + E   
Sbjct: 392 DDGHIFCAEDQIESETAKFIAFLSKVYADLGFHDWTIKLSTRPEKRIGSDESWDLVEKAL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                +   +       G  Y     +   +AI         Q                 
Sbjct: 452 GDACKAAGYEYELLEGEGAFYGPKLEFTLTDAIGRNWQCGTLQVDPNLPERLDANFIGQD 511

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            S+ +   +           + + ++              V++ ++  D+D         
Sbjct: 512 GSKHRPFMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSDAD--DYVNEVV 569

Query: 398 QMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           + LR AG+RAE  + + K        + G           P+ +  G  E     + ++ 
Sbjct: 570 ETLRAAGVRAEADIRNEKINYKVREHSVGK---------VPVILAVGHREVEERTVSVRR 620

Query: 450 LAKGKELSREIKNNESWREARVAQITIP 477
           L  G++ + +++  E+  +A   + T P
Sbjct: 621 L--GEKQT-KVEALEAVTKALAVEATPP 645


>gi|257437960|ref|ZP_05613715.1| ATP phosphoribosyltransferase [Faecalibacterium prausnitzii A2-165]
 gi|257199620|gb|EEU97904.1| ATP phosphoribosyltransferase [Faecalibacterium prausnitzii A2-165]
          Length = 542

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 56/154 (36%), Gaps = 9/154 (5%)

Query: 33  IRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           +R +YE  G         E      +        ++ V +  D DG+ ++L+ D+T  +A
Sbjct: 30  LRALYEAAGCRKYHMGRFEEYGLYQEN--RSFLSSEQVITFTDLDGRLLALKPDVTLSIA 87

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMA 152
           +               Y               F++  Q  ++ +G+  E    +   + A
Sbjct: 88  KTA----QPAPGETLRYYYHENVYRPSAESHTFQEISQMGLEMLGAVGEAQVQQAVRLAA 143

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
            +L  +G     + + +++   L G+ + +G+  
Sbjct: 144 QSLAQLGAA---WVLEVSHMGYLFGLFDALGVPE 174


>gi|150403134|ref|YP_001330428.1| glycyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166227936|sp|A6VIK1|SYG_METM7 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|150034164|gb|ABR66277.1| glycyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 574

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 34/116 (29%), Gaps = 20/116 (17%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  + +              LR  G+ AE     S   G +    D    P  +
Sbjct: 479 SPIKVGVFPLVNKEGMPEIAMDLKNKLRENGLIAE--YDDSGAIGRRYMRMDEVGTPFCV 536

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
                  +   + I++    ++                    IPI+E+VS +K  L
Sbjct: 537 TIDGETLTDRSVTIRERDSREQ------------------FRIPINEVVSYIKDKL 574



 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYE-NYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++N ++++ R  Y  N GF  I++P +   + L    
Sbjct: 29 GFFDYGPLGAILKNNVINTWRKHYIVNEGFYEIDSPTVTPYEVLKASG 76


>gi|331701343|ref|YP_004398302.1| Prolyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128686|gb|AEB73239.1| Prolyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 569

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+ N+I   IR   E      +  P +  +D L K     D     
Sbjct: 34  QISAGMYAYLPLAYRVLNKIETIIRQEMEKTSAHEMLMPDILPAD-LWKESGRYDTYGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +F  ++       L  
Sbjct: 93  LFKFKNRHETDFILGP 108



 Score = 39.8 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 39/123 (31%), Gaps = 20/123 (16%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +      +I      +  +         L    ++  +     +  G +   +D  
Sbjct: 464 WPKAVAPFDVHVIPINAKKAVQMDLAHQIEAQLTADQLQVLVDDRKERA-GVKFADSDLM 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             PL +  G      G+++IK    G+                   + + ++EL  T+KK
Sbjct: 523 GIPLRVTIGKK-AEEGIVEIKIRKTGE------------------TVEVNVTELSDTIKK 563

Query: 488 ILQ 490
           +L+
Sbjct: 564 MLK 566


>gi|328754457|gb|EGF68073.1| glycyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 506

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +SD   K +     LR      +     ++  G + +  D    P  I      
Sbjct: 415 VLPLSRNSDLSPKARDLAARLREH-WNVDFD--DAQAIGKRYRRQDEIGTPFCITVDFDS 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++     +    I   E +   +
Sbjct: 472 LEDDAVTIRERDTMAQQRVSIDKVEEYLGGK 502


>gi|254496505|ref|ZP_05109377.1| prolyl-tRNA synthase [Legionella drancourtii LLAP12]
 gi|254354272|gb|EET12935.1| prolyl-tRNA synthase [Legionella drancourtii LLAP12]
          Length = 577

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 57/542 (10%), Positives = 142/542 (26%), Gaps = 78/542 (14%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  ++   +R          +  P ++ ++ L +     +  
Sbjct: 39  MIRKLGSGLYTWMPLGLKVLRKVEHIVREEMNRINSVELLMPAVQPAE-LWQETGRWETF 97

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGP----VFRNEK 119
              + +++D +G+         ++   + R   +++  +       +         R   
Sbjct: 98  GGQLLTMKDSNGREYCYGPTHEEVITDIMRNELQSYKQLPRCFYQIQTKFRDEIRPRFGV 157

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI- 178
                F             S +    +M        + +G+K                  
Sbjct: 158 MRAREFIMKDAYSFHLNLESLQNTYKDMYQAYCRIFDRMGLKYRAVEADTGAIGGSASHE 217

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            + +   G+D +        A +      L+  K      +T    D  K   +    + 
Sbjct: 218 FQVLADSGEDLIFYSDASDYAANIEQAISLKPAKSTNQTTQTIALVDTPKQKTIAE--VA 275

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
             +   S D+ K++    +         +G +EL  +  +     ++  +     TIV+ 
Sbjct: 276 QFMKIASSDMVKTLIVRGKEHPLVALVLRGDDELNEVKAIKHPLIHSPLQFVDEETIVKT 335

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG--------------- 343
           L    G +    L  PV+ + Q   +   V G  + D                       
Sbjct: 336 LNAPIGSLGPIDLAIPVIIDHQALAMDSFVCGANQVDKHYQHAAWDKDVKEYQGYDLRNV 395

Query: 344 -------------QNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                         +                 K++ ++  N +     ++        + 
Sbjct: 396 KEGDISPDGKGTLHSCRGIEVGHVFQLGDKYAKAMNAAVINEQGQLETMMMGCYGLGITR 455

Query: 391 SKYQMYTQMLRTAGIR----------AEMFLGSSKN---------FGNQLKYA------- 424
                  Q     GI             + L   K+            Q + A       
Sbjct: 456 VVAAAIEQHHDEQGIIWPSNIAPFQVVIIPLNGHKSQAVKDQADVLYKQFRNAGIDVLLD 515

Query: 425 ---DRRNCPLA----------IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
              +R     A          ++       +  ++ K  A G+  S ++    +   + V
Sbjct: 516 DRNERAGALFADHDLIGVPHRLVVSDRNLEQNCVEYKSRATGETKSLDLNTAVAEIVSLV 575

Query: 472 AQ 473
           +Q
Sbjct: 576 SQ 577


>gi|27380648|ref|NP_772177.1| threonyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27353813|dbj|BAC50802.1| threonyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 723

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 47/154 (30%), Gaps = 6/154 (3%)

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVAL 362
           +E +L   +  + Q            R+        G   P           + R I  L
Sbjct: 545 FEYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDHDGGKKPPVMVHRAICGSMERYIGIL 604

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
               +    +  + PV        S+     +   +  R AG+R E+ L  ++    +++
Sbjct: 605 IEHYAGNFPLW-LSPVQAVVTTITSEGDEYAKQVLEQARRAGLRVEIDL-RNEKINYKVR 662

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
                  P  ++ G  E     + ++ L    + 
Sbjct: 663 EHSLAKIPALLVVGKKEAETHSVSVRRLGSDGQK 696


>gi|296394267|ref|YP_003659151.1| prolyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181414|gb|ADG98320.1| prolyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 599

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 1/93 (1%)

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            L               V + +           + Y   L + G+R  +      + G +
Sbjct: 470 WLDEKGLRWPPQVAPFQVHVLSTGKGGAEAEAAERYAAELESHGLRVLLD-DRKASPGVK 528

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
              A+    P+ ++ G      G +++K+   G
Sbjct: 529 FADAELLGAPVVVVVGRDWAGEGKVELKERFSG 561



 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        +++  ++   +R   +  G   I  P L   +  ++  ++    D     +
Sbjct: 40  GVFTWLPLGLKVLRQVEAVVREEMDAIGAQEILLPALAPRQPYETSNRWTEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 96  FRLKDRKGGDYLLAP 110


>gi|285017864|ref|YP_003375575.1| threonyl-tRNA synthetase (threonine--tRNA ligase) protein
           [Xanthomonas albilineans GPE PC73]
 gi|283473082|emb|CBA15587.1| probable threonyl-trna synthetase (threonine--trna ligase) protein
           [Xanthomonas albilineans]
          Length = 634

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/145 (8%), Positives = 35/145 (24%), Gaps = 4/145 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G      K   I   +   +R +Y + G+  +  P +   D  L +     D     +F 
Sbjct: 262 GLVFWHPKGWSIWQVVEQYMRKVYRDNGYGEVRCPQI--LDVSLWQQSGHWDNYQDNMF- 318

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             + + +  +++        +   +   +       Y         +             
Sbjct: 319 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGILRVRG 378

Query: 133 VDNVGSSAETADAEMCMMMADTLEA 157
                      + ++   +      
Sbjct: 379 FTQDDGHIFCTEQQIEAEVTAFHRQ 403


>gi|62390552|ref|YP_225954.1| threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325890|emb|CAF20053.1| THREONYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 700

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 7/106 (6%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    D +   +  T  LR  GIRA++     +    +++       P  +
Sbjct: 587 WLAPHQVMGIPVADDCIPHLETITAQLREKGIRADVDTSDDR-MQKKIRNHTTGKVPFML 645

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQI 474
           + G  +     +  + L  G +     +   I    SW   R+   
Sbjct: 646 LAGARDVEANAVSFRFL-DGTQVNGVPVDEAIAVISSWIGDRINDQ 690



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 68/259 (26%), Gaps = 24/259 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            G          +RN + D  R  +   G+  + TP +   D   +          G+F 
Sbjct: 298 SGLPVFHPNGGIVRNEMEDHSRRRHIAAGYSFVNTPHITKQDLFERS-GHLGFYKDGMFP 356

Query: 72  ------SLQDDD-----GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                    +D      GQ   L+             +        R+YR  P+   E  
Sbjct: 357 PMQVDAEFDEDGNVTKPGQEYYLKPMNCP-------MHNLIFDSRGRSYRELPLRLFEFG 409

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              R+ +                DA +          +    +     + +  + D  LE
Sbjct: 410 NVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLE 469

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                    +    I  R+ + L++           E   D  G    G  ++ +  D +
Sbjct: 470 LSTRDPKKSVGSDEIWERSTEILNRVATN----SGLELVPDPEGAAFYGPKISVQARDAI 525

Query: 241 VSFLSIDLEKSMHELYELV 259
                +   +    + E  
Sbjct: 526 GRTWQMSTVQLDFNMPERF 544


>gi|62422036|gb|AAX82600.1| putative threonyl-tRNA synthetase [Lactobacillus reuteri]
          Length = 601

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/241 (8%), Positives = 73/241 (30%), Gaps = 5/241 (2%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +I  ++  +  D + + +     ++     +K +    +  +         + + +    
Sbjct: 356 KILKLIMSVYEDFDITDYSFRLSLRDPKNVKKYYANDEMWEKSQSMLKSAMDDLNLDYYE 415

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----YDGLVSRFKGQNVPATGF 351
             G   + G   +      + N++    +        R    Y G   +     +   G 
Sbjct: 416 AEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLSYVGQDGKEHQPVMIHRGV 475

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
              + R +  L  +             +     ++           + ++ A IR  +  
Sbjct: 476 VGTMERFMAYLTEIYKGAFPTWLAPEQVHIIPVNEEAHGEYADNLAKKMKAANIRVNVAH 535

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             ++  G +++ A  +  P  ++ G  E++   + +    + ++     +   +     +
Sbjct: 536 -RNEKMGYKIREAQTQKVPYTLVVGDDEKNSNGVSVSKYGEKEQNEMSQEAFMNEILEDI 594

Query: 472 A 472
           A
Sbjct: 595 A 595



 Score = 40.6 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 53/188 (28%), Gaps = 13/188 (6%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I  R + + +    + TP+L   D+  K           +F
Sbjct: 217 GLPYWLPKGATIRRTIERYIIDREVADGH--QHVYTPVLMNLDAY-KTSGHWAHYRDDMF 273

Query: 72  SLQDDD-GQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKH------GPG 123
              D   G+ +  R        +    +  +    P R   +G + R EK          
Sbjct: 274 PPMDMGDGEMLESRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRYEKSGALSGLQRV 333

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R                 +  A++  ++    E   I    + + + + K +        
Sbjct: 334 REMTLNDGHTFVTLDQIRSEFAKILKLIMSVYEDFDITDYSFRLSLRDPKNVKKYYANDE 393

Query: 184 LHGDDKLN 191
           +    +  
Sbjct: 394 MWEKSQSM 401


>gi|50842433|ref|YP_055660.1| glycyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|50840035|gb|AAT82702.1| glycyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|313764544|gb|EFS35908.1| glycyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313772417|gb|EFS38383.1| glycyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313792233|gb|EFS40334.1| glycyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801818|gb|EFS43052.1| glycyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313807427|gb|EFS45914.1| glycyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313809935|gb|EFS47656.1| glycyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313813027|gb|EFS50741.1| glycyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313816086|gb|EFS53800.1| glycyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313818473|gb|EFS56187.1| glycyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313820236|gb|EFS57950.1| glycyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313822955|gb|EFS60669.1| glycyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313825117|gb|EFS62831.1| glycyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313827686|gb|EFS65400.1| glycyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313830266|gb|EFS67980.1| glycyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834067|gb|EFS71781.1| glycyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314915540|gb|EFS79371.1| glycyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918337|gb|EFS82168.1| glycyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314919992|gb|EFS83823.1| glycyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314925297|gb|EFS89128.1| glycyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314932005|gb|EFS95836.1| glycyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314955874|gb|EFT00274.1| glycyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314958355|gb|EFT02458.1| glycyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314960090|gb|EFT04192.1| glycyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314962891|gb|EFT06991.1| glycyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314968031|gb|EFT12130.1| glycyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314973272|gb|EFT17368.1| glycyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314975947|gb|EFT20042.1| glycyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978296|gb|EFT22390.1| glycyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314984034|gb|EFT28126.1| glycyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314987797|gb|EFT31888.1| glycyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990019|gb|EFT34110.1| glycyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315078106|gb|EFT50157.1| glycyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315080736|gb|EFT52712.1| glycyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315084406|gb|EFT56382.1| glycyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315085746|gb|EFT57722.1| glycyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088836|gb|EFT60812.1| glycyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315096185|gb|EFT68161.1| glycyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315098446|gb|EFT70422.1| glycyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315101196|gb|EFT73172.1| glycyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315105473|gb|EFT77449.1| glycyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315108418|gb|EFT80394.1| glycyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327326101|gb|EGE67891.1| glycine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327332028|gb|EGE73765.1| glycine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327443231|gb|EGE89885.1| glycyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327446016|gb|EGE92670.1| glycyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327448005|gb|EGE94659.1| glycyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327450871|gb|EGE97525.1| glycyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327453052|gb|EGE99706.1| glycyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327453781|gb|EGF00436.1| glycyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328753558|gb|EGF67174.1| glycyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328754290|gb|EGF67906.1| glycyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328760397|gb|EGF73965.1| glycine--tRNA ligase [Propionibacterium acnes HL099PA1]
 gi|332675345|gb|AEE72161.1| glycine--tRNA ligase [Propionibacterium acnes 266]
          Length = 506

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +SD   K +     LR      +     ++  G + +  D    P  I      
Sbjct: 415 VLPLSRNSDLSPKARDLAARLREH-WNVDFD--DAQAIGKRYRRQDEIGTPFCITVDFDS 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++     +    I   E +   +
Sbjct: 472 LEDDAVTIRERDTMAQQRVSIDKVEEYLGGK 502


>gi|150014998|ref|YP_001307252.1| glycyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|254781874|sp|A6LPL6|SYG_CLOB8 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|149901463|gb|ABR32296.1| glycyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 463

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/226 (8%), Positives = 63/226 (27%), Gaps = 10/226 (4%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     +       E + + +   +     +        +    +        
Sbjct: 238 EWHKYWKDYCWNFLLNLNVKAENLRMRDHGEEELSFYSNATSDIEYLFPFGWGELWGIAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   ++      S       +  V      ++ A   ++    LI A    E   
Sbjct: 298 RTDYDLSKHQEHSGQDLSYLDQTTNEKYVPYVIEPSLGADRVALAF--LIEAYDEEELEG 355

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM------FLGSSKNFGNQLKY 423
            +++ +  +        +  L   +  ++   +  I AE+          + + G + + 
Sbjct: 356 GDVRTVMHLHPALAPFKAAILPLSKKLSEK--SLDIYAELSKKFNLDFDETGSIGKRYRR 413

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            D    P  I           + I++    ++   +I   E++ +A
Sbjct: 414 QDEIGTPYCITIDFDTLEDESVTIRNRDTMEQERIKISEIENYIQA 459


>gi|307822740|ref|ZP_07652971.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736344|gb|EFO07190.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 635

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  ++               L   GIR ++ L  ++  G +++    +  P  +
Sbjct: 535 WLSPVQVVVLNITDRHAEYAAQIMLDLEKQGIRVKIDL-RNEKIGFKIREHSMQRVPYLV 593

Query: 434 IQGTGERSRGMLQIK 448
           I G  E  +  + ++
Sbjct: 594 IIGDKELEQQSITVR 608



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/152 (6%), Positives = 42/152 (27%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I  ++   IR      G+  ++TP +       +     ++    +F+ 
Sbjct: 261 GMVFWHEKGWVIYQQVEQYIREKLRVNGYGEVKTPQVVDRSLWERS-GHWEKFGDMIFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             ++ +  +++        +   +   +                 +            + 
Sbjct: 320 HSEN-RDYAIKPMNCPCHVQIYNQGLKSYRDLPIRLAEFGSCHRNEPSGTLHGLMRVRNF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +     + ++   ++  ++ +     D+
Sbjct: 379 VQDDAHIFCTEGQIQDEVSTFIDMLFDVYKDF 410


>gi|302342263|ref|YP_003806792.1| threonyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638876|gb|ADK84198.1| threonyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 627

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 4/94 (4%)

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            ++                + T+   +D     +     L+ AG R EM L  ++  G +
Sbjct: 511 LIEHYAGRFPFWLAPEQARVLTVTERADDW--AREVFAALKNAGYRVEMDL-RNEKLGAK 567

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           ++ A     P  ++ G  E     +  + L  GK
Sbjct: 568 VREAQLLKVPYMLVIGDREVDERQVAPR-LRSGK 600


>gi|73919785|sp|Q8NPZ0|SYT_CORGL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 695

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 7/106 (6%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    D +   +  T  LR  GIRA++     +    +++       P  +
Sbjct: 582 WLAPHQVMGIPVADDCIPHLETITAQLREKGIRADVDTSDDR-MQKKIRNHTTGKVPFML 640

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQI 474
           + G  +     +  + L  G +     +   I    SW   R+   
Sbjct: 641 LAGARDVEANAVSFRFL-DGTQVNGVPVDEAIAVISSWIGDRINDQ 685



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 68/259 (26%), Gaps = 24/259 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            G          +RN + D  R  +   G+  + TP +   D   +          G+F 
Sbjct: 293 SGLPVFHPNGGIVRNEMEDHSRRRHIAAGYSFVNTPHITKQDLFERS-GHLGFYKDGMFP 351

Query: 72  ------SLQDDD-----GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                    +D      GQ   L+             +        R+YR  P+   E  
Sbjct: 352 PMQVDAEFDEDGNVTKPGQEYYLKPMNCP-------MHNLIFDSRGRSYRELPLRLFEFG 404

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              R+ +                DA +          +    +     + +  + D  LE
Sbjct: 405 NVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLE 464

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                    +    I  R+ + L++           E   D  G    G  ++ +  D +
Sbjct: 465 LSTRDPKKSVGSDEIWERSTEILNRVATN----SGLELVPDPEGAAFYGPKISVQARDAI 520

Query: 241 VSFLSIDLEKSMHELYELV 259
                +   +    + E  
Sbjct: 521 GRTWQMSTVQLDFNMPERF 539


>gi|238797380|ref|ZP_04640880.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238718811|gb|EEQ10627.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 642

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 101/356 (28%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E    +    N I        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEQWTRAESDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      +     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSIERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           ++ G  E   G + ++        +R  K+  S        + + + +L++ ++  
Sbjct: 594 LVCGDKEVESGKIAVR--------TRRGKDLGSLD------VNVVVDQLLAEIRSR 635



 Score = 40.2 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 14/203 (6%), Positives = 50/203 (24%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++       RA   L     +
Sbjct: 425 EKRIGSDEQWTRAESDLAAALTE 447


>gi|268323272|emb|CBH36860.1| threonyl-tRNA synthetase [uncultured archaeon]
          Length = 626

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/246 (10%), Positives = 59/246 (23%), Gaps = 18/246 (7%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
             L +    +     +  N   ++      F    LE       +        ++ ++  
Sbjct: 336 RRLRKFTMPDMHTLCRDMNEALDEFKKQYEFCIQVLEGIGFSTSDYEVAIRFTKEFYDAN 395

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               E + +       I       R   +     +E      +        V   V    
Sbjct: 396 KGFVEDLVQIAGKPVLI--ECWDQRFFYFV--LKFEFNFVDALGKASALSTVQIDVENAE 451

Query: 333 RY-----DGLVSRFKGQNVPATGFSIGISRLIVALKSL------ESSTNNIKEMGPVLIT 381
           RY     D    + +   +  +        +   L+                 + P  + 
Sbjct: 452 RYGITYIDANGEKKRPIILHCSPSGAIERCIYALLEKAYLEKEGGFMPMLPLWLSPTQLR 511

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +      L         L   GIR ++     +    +++ A R   P   + G  E  
Sbjct: 512 ILPVAERHLEYIDSILPAL--NGIRVDVDDRE-ETVSKKIRDAGREWIPYVAVVGDKEVE 568

Query: 442 RGMLQI 447
              L +
Sbjct: 569 NKTLSV 574


>gi|116075299|ref|ZP_01472559.1| prolyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116067496|gb|EAU73250.1| prolyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 600

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 2/113 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I     V++     D   L   +     L+ +GI   +   S +  G + K AD  
Sbjct: 490 WPLAIAPFQVVIVVANMQDDTQLQLGEQLYSTLQASGIDVLLDDRSERA-GVKFKDADLI 548

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             P  ++ G    + G +++ + A             +     +  IT P  +
Sbjct: 549 GIPWRLVVGRD-AANGQVELVERATRDTQVLPHAEAITALRQVMNTITSPTVD 600



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 25/75 (33%), Gaps = 2/75 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         R+  +I   ++   +  G      P L+ ++   +    +        +
Sbjct: 37  SGIYAYLPLMWRVLRKISAIVQQEMDATGALETLLPQLQPAELWERSGRWQGYTAGEGIM 96

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G+ + L  
Sbjct: 97  FHLEDRQGRQVGLGP 111


>gi|327330808|gb|EGE72554.1| glycine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 506

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +SD   K +     LR      +     ++  G + +  D    P  I      
Sbjct: 415 VLPLSRNSDLSPKARDLAARLREH-WNVDFD--DAQAIGKRYRRQDEIGTPFCITVDFDS 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++     +    I   E +   +
Sbjct: 472 LEDDAVTIRERDTMAQQRVSIDKVEEYLGGK 502


>gi|70607289|ref|YP_256159.1| prolyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|114152265|sp|Q4J8L4|SYP_SULAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|68567937|gb|AAY80866.1| bifunctional aminoacyl-tRNA synthetase [Sulfolobus acidocaldarius
           DSM 639]
          Length = 483

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +IR   +D IR + +  G + +  PLL   D L +           V
Sbjct: 32  PVKGMGVWLPYGFKIRQAAVDLIRKLLDAKGHEEVLFPLLVPEDLLRREGEHIKGFESEV 91

Query: 71  FSLQDDDGQW-----ISLRY 85
           F      G+      ++LR 
Sbjct: 92  F-WVTKGGEENLDIRLALRP 110



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 18/112 (16%)

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
                +   +   ++L + GI   +   + K  G +    + +  PL I  G  E S   
Sbjct: 303 ETEKIIEYSEDVAKILVSNGINTVIDKDTEKTPGEKYYIWEIKGVPLRIEIGPRELSSNS 362

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           + IK                  R   +  I++    LVS V K+L+  ++++
Sbjct: 363 VFIK------------------RRDTLQGISVKKENLVSEVVKLLETLRKDL 396


>gi|148508028|gb|ABQ75826.1| threonine--tRNA ligase [uncultured haloarchaeon]
          Length = 643

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 66/240 (27%), Gaps = 17/240 (7%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E I  +++   +D E ++    E   G+       +E+   +E   ++   S  I     
Sbjct: 402 ESIQEVLNTFGLDAEVALATRPEKSVGS-------DEIWQQAESQLETVLTSRGINYDLE 454

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG---- 350
              G  Y     + A       N     V                     + P       
Sbjct: 455 PGDGAFYGPKIDF-AFEDALGRNWDGPTVQLDFNMPDRFDLSYTGEDNQDHQPVMIHRAL 513

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           +       +V ++  +           + I  +    D L               R E+ 
Sbjct: 514 YGSYERFFMVLIEHFDGKFPLWLAPEQIRILPIS--DDQLGYAHRVKNQFDD--FRVEID 569

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              ++    +++       P  II G+ E   G + ++D  + ++    I    S   A 
Sbjct: 570 -DQTRTLSRKIRAGQDDRIPYMIILGSDEEEAGTISVRDRFENEKQDVNIDAFRSHVNAE 628



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 41/145 (28%), Gaps = 2/145 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +I N +     ++  + G++P+ETP L  ++ L K     +     +F L
Sbjct: 262 GLPLYHPNGKKILNELSSYAESLNVDAGYEPVETPHLFKTE-LWKVSGHYENYVDDMF-L 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D       L+       A    +   +       Y        ++              
Sbjct: 320 LDVSDDEYGLKPMNCPGHATIFNQQSWSYRDLPVRYYEDGKVYRKEQRGELSGLSRVWAF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAV 158
                       ++   +   +E++
Sbjct: 380 TIDDGHLFCTPEQIEQEVTQVIESI 404


>gi|160878806|ref|YP_001557774.1| glycyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|189082277|sp|A9KJ36|SYG_CLOPH RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|160427472|gb|ABX41035.1| glycyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 462

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 3/103 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV I  +          +     L +     E       N G + +  D    
Sbjct: 362 HFHPAIAPVKIGVLPLSKKLSENAEKIYTDL-SKYYNCEFD--DRGNIGKRYRRQDEIGT 418

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P  I       + G + ++D    ++   +I++ +++ E +  
Sbjct: 419 PFCITYDFDSETDGAVTVRDRDTMEQERIKIEDLKAYFEKKFE 461


>gi|94984677|ref|YP_604041.1| prolyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|114152189|sp|Q1J0W2|SYP_DEIGD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94554958|gb|ABF44872.1| prolyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 497

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 38/110 (34%), Gaps = 7/110 (6%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       V++  +    +    +++ +     LR  G+R ++         N  K
Sbjct: 291 GLIMPPRIAPIQVVVIPVSRKENFDQMVAEGEKLAHELRAQGLRVKVDRREG--VTNGFK 348

Query: 423 YAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           Y D   +  P+ I  G  +  +G++ +K+    ++ +   +        R
Sbjct: 349 YNDWELKGVPVRIELGPRDLEQGVVVVKNRNAEEKETLPREEAIRGMANR 398


>gi|288802831|ref|ZP_06408268.1| threonine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334648|gb|EFC73086.1| threonine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 649

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +          Q          +R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYAQKVKAYFDAHDVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           + M    ++  G +++  + +  P  +I G  E + G++ ++    G++ +  ++     
Sbjct: 578 SIMD-DRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTMEAFAER 636

Query: 467 REARVAQI 474
               VA+ 
Sbjct: 637 INNEVAEQ 644


>gi|257092825|ref|YP_003166466.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257045349|gb|ACV34537.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 638

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/352 (9%), Positives = 87/352 (24%), Gaps = 14/352 (3%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    +     G   +    +     +        +      A+ +     +
Sbjct: 266 HAKGWTIWQEVEQYMRRLLGENGY---CEVKTPMIMDRTLWERSGHWQNYAEHMFTTASE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
             DY I   N      I  +      D                   L G+ + +     D
Sbjct: 323 NRDYAIKPMNCPGHIQIFNQGLRSYRDLPLRLAEFGSCHRNEPSGALHGI-MRVRAFVQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F   A +  E    +     I  +    ++   +        G + +   +E    
Sbjct: 382 DAHIFCTEAQVLPETAAFIDLLEKIYADFGFTDILVKLSTRPDKRIGSDAVWDRAEAALA 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDG 336
               +  +        G  Y     +        +    +                 Y G
Sbjct: 442 EALAAKGLAYDLQPGEGAFYGPKIEFSL---KDCLGRVWQCGTLQLDFALPERLDAHYVG 498

Query: 337 LVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
             +      +        + R I  L    +    +       +  ++         +  
Sbjct: 499 EDNDRHVPVMLHRAILGSLERFIGILIEHYAGAMPLWLSPM-QVVVLNISEKQGDYAEQV 557

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              LR AG+RAE  L  ++    +++       P  ++ G  E +  ++ ++
Sbjct: 558 AATLRRAGLRAEADL-RNEKITRKIREHSLNKLPYQVVVGDKEVAANLVAVR 608



 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 38/112 (33%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R +    G+  ++TP++    +L +         + +F+ 
Sbjct: 261 GMVFWHAKGWTIWQEVEQYMRRLLGENGYCEVKTPMIMDR-TLWERSGHWQNYAEHMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
             ++ +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 320 ASEN-RDYAIKPMNCPGHIQIFNQGLRSYRDLPLRLAEFGSCHRNEPSGALH 370


>gi|188994851|ref|YP_001929103.1| prolyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|259511612|sp|B2RJG1|SYP_PORG3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|188594531|dbj|BAG33506.1| prolyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 493

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 33/104 (31%), Gaps = 4/104 (3%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  + + L+    K     Q LR  GI  +     +K  G + 
Sbjct: 293 GLVLPPKLAPYQVVIVPIYRNEEQLAQIDEKATQIIQALRAKGISVKYDNSDNKKPGWKF 352

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              + +  P+ +  G  +     ++I       + +  +   E 
Sbjct: 353 AEYELKGVPVRLAMGARDLENNTIEIARRDTLTKETVGLDGIEE 396


>gi|187934816|ref|YP_001884426.1| glycyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187722969|gb|ACD24190.1| glycine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 463

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/269 (10%), Positives = 66/269 (24%), Gaps = 34/269 (12%)

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
             +L+ F   G  L   +   D   +F    N+ +E         ++ +     E     
Sbjct: 224 QMELEFFCKPGTDLEWHKYWKDYCWNFLLNLNVKTE---------NLRMRDHGEEELSFY 274

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
               +  +                 + +  K      + L Y      E  + + +    
Sbjct: 275 SNATSDIEYLFPFGWGELWGIADRTDYDLKKHQEHSGQDLNYLDQTNNEKYIPYVIEPSL 334

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
                          D +   F  +         G SR ++ L            + P  
Sbjct: 335 GA-------------DRVTLAFLIEAYDEEELDGGDSRTVLHL---------HPALAPFK 372

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
              +                L +      +    + + G + +  D    P  I      
Sbjct: 373 AAILPLSKKLSENALEVYSSL-SKKFN--IDFDETGSIGKRYRRQDEIGTPYCITVDFDT 429

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWRE 468
                + I++    ++   +I   E++ E
Sbjct: 430 LEDQCVTIRNRDTMEQERIKISELEAYIE 458


>gi|312220920|emb|CBY00861.1| similar to glycyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 658

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 2/114 (1%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              VLI  +    D     Q     LR+ GI + +   S  + G +    D    PL I 
Sbjct: 541 PTKVLIVPLSSHPDFSPFVQTLRSKLRSIGISSRID-ASGASIGKRYSRNDELGTPLGIT 599

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                       ++D    +++   I    +     V       S++ + + K 
Sbjct: 600 VDFQSVKDNTFTLRDRDSTEQVRASIDEIIAAISNIVNGSE-KWSDVAARLPKF 652


>gi|302528819|ref|ZP_07281161.1| glycyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437714|gb|EFL09530.1| glycyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 468

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/258 (10%), Positives = 63/258 (24%), Gaps = 24/258 (9%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +   D   D+ K   +  E +            +      E +    A      E 
Sbjct: 231 EQWHQYWIDARTDWYKDLGIKPENL------------RHFEHPKEKL-SHYAKRTVDIEY 277

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
                  ++ G        +   +     ++G              +   +   +  G  
Sbjct: 278 RFEFNAGQEWGELEGIANRTDFDLTTHSNHSGVDLSFFDQASGQRYRPFVIEPAAGVGRS 337

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
               L+  +  + VP          ++          +         +  +  ++D   K
Sbjct: 338 MMAFLIDAYDEEEVPNAKGGTDKRTVLHL--------DPRLAPFKAAVLPLSRNADLSPK 389

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     LR      +     ++  G + +  D    P  +           + I++   
Sbjct: 390 ARDLAARLRKH-WNVDFD--DAQAIGRRYRRQDEIGTPYCVTVDFDTLEDDAVTIRERDS 446

Query: 453 GKELSREIKNNESWREAR 470
            K+    I   ES+   R
Sbjct: 447 MKQERISIDQVESYLAGR 464


>gi|303277979|ref|XP_003058283.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460940|gb|EEH58234.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 725

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +     S        + LR AG  A++   + +    +++ A   +    ++ G G
Sbjct: 594 QVMLVPISEASREYALEVKKQLRKAGHHAQVD-ETDRKMQKKVREAQLEHWNYILVVGEG 652

Query: 439 ERSRGMLQIK 448
           E++   + ++
Sbjct: 653 EKTNRTVNVR 662



 Score = 42.5 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N +++ I+  Y  Y +  + TP +   D L K         + +FS   + 
Sbjct: 320 FLPDGATIYNNLINFIKEKYWEYEYSEVVTPNIYNFD-LWKTSGHAAHYKENMFSFNVEK 378

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 379 -EEFGLKPMNCPG 390


>gi|145295791|ref|YP_001138612.1| threonyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140845711|dbj|BAF54710.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 686

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 7/106 (6%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    D +   +  T  LR  GIRA++     +    +++       P  +
Sbjct: 573 WLAPHQVMGIPVADDCIPHLETITAQLREKGIRADVDTSDDR-MQKKIRNHTTGKVPFML 631

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQI 474
           + G  +     +  + L  G +     +   I    SW   R+   
Sbjct: 632 LAGARDVEANAVSFRFL-DGTQVNGVPVDEAIAVISSWIGDRINDQ 676



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 68/259 (26%), Gaps = 24/259 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            G          +RN + D  R  +   G+  + TP +   D   +          G+F 
Sbjct: 284 SGLPVFHPNGGIVRNEMEDHSRRRHIAAGYSFVNTPHITKQDLFERS-GHLGFYKDGMFP 342

Query: 72  ------SLQDDD-----GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                    +D      GQ   L+             +        R+YR  P+   E  
Sbjct: 343 PMQVDAEFDEDGNVTKPGQEYYLKPMNCP-------MHNLIFDSRGRSYRELPLRLFEFG 395

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              R+ +                DA +          +    +     + +  + D  LE
Sbjct: 396 NVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLE 455

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                    +    I  R+ + L++           E   D  G    G  ++ +  D +
Sbjct: 456 LSTRDPKKSVGSDEIWERSTEILNRVATN----SGLELVPDPEGAAFYGPKISVQARDAI 511

Query: 241 VSFLSIDLEKSMHELYELV 259
                +   +    + E  
Sbjct: 512 GRTWQMSTVQLDFNMPERF 530


>gi|72161265|ref|YP_288922.1| glycyl-tRNA synthetase [Thermobifida fusca YX]
 gi|123747241|sp|Q47RL8|SYG_THEFY RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|71914997|gb|AAZ54899.1| glycyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 462

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 28/93 (30%), Gaps = 3/93 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      E     +   G + +  D    P  +      
Sbjct: 371 VLPLSRNADLSPKARDLAAKLRKR-WNVEFD--DAGAIGRRYRRQDEIGTPFCVTIDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                + +++     +    I   E +   R+A
Sbjct: 428 LEDNAVTVRERDSMAQERISIDQVEQYLAERLA 460


>gi|19552881|ref|NP_600883.1| threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|21324440|dbj|BAB99064.1| Threonyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
          Length = 686

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 7/106 (6%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P  +  +    D +   +  T  LR  GIRA++     +    +++       P  +
Sbjct: 573 WLAPHQVMGIPVADDCIPHLETITAQLREKGIRADVDTSDDR-MQKKIRNHTTGKVPFML 631

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQI 474
           + G  +     +  + L  G +     +   I    SW   R+   
Sbjct: 632 LAGARDVEANAVSFRFL-DGTQVNGVPVDEAIAVISSWIGDRINDQ 676



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 68/259 (26%), Gaps = 24/259 (9%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF- 71
            G          +RN + D  R  +   G+  + TP +   D   +          G+F 
Sbjct: 284 SGLPVFHPNGGIVRNEMEDHSRRRHIAAGYSFVNTPHITKQDLFERS-GHLGFYKDGMFP 342

Query: 72  ------SLQDDD-----GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
                    +D      GQ   L+             +        R+YR  P+   E  
Sbjct: 343 PMQVDAEFDEDGNVTKPGQEYYLKPMNCP-------MHNLIFDSRGRSYRELPLRLFEFG 395

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              R+ +                DA +          +    +     + +  + D  LE
Sbjct: 396 NVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLE 455

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
                    +    I  R+ + L++           E   D  G    G  ++ +  D +
Sbjct: 456 LSTRDPKKSVGSDEIWERSTEILNRVATN----SGLELVPDPEGAAFYGPKISVQARDAI 511

Query: 241 VSFLSIDLEKSMHELYELV 259
                +   +    + E  
Sbjct: 512 GRTWQMSTVQLDFNMPERF 530


>gi|88706032|ref|ZP_01103740.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88699746|gb|EAQ96857.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 645

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/152 (10%), Positives = 39/152 (25%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   I   I   +R      G+  I+TP L       K     D+    +F L
Sbjct: 261 GMVFWHPQGWTIYQVIEQYMREQQRANGYQEIKTPQLVDMSLWEKS-GHADKFGDDMFML 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q  D +  +++        +   +   +                 +              
Sbjct: 320 Q-ADEREFAVKPMNCPCHVQVFNQGLRSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                     + ++   ++  ++ +     D+
Sbjct: 379 TQDDGHIFCTEEQIQSEVSTFIDFLHAVYRDF 410


>gi|281492788|ref|YP_003354768.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376440|gb|ADA65926.1| Prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 616

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 89/312 (28%), Gaps = 14/312 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++ + +R  ++  G   +  P L  +D L +     D   + ++ L
Sbjct: 38  GIYAYLPLANRVLEKLKNIMREEFDEIGAVELLAPSLLTAD-LWRESGRYDTYGEDLYKL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ--- 127
           ++ D     L     +    L R    ++  +      Y+I P FR+EK       +   
Sbjct: 97  KNRDNSDFILGPTHEETMTSLVRDEITSYKKLP--LNVYQIAPKFRDEKRPRYGLLRGRE 154

Query: 128 --FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                    +    +            + +           I            E I + 
Sbjct: 155 FLMKDGYSYHADQDSLDETYNDYKKAYEKIFERAGLNFKPIIADAGAMGGKDSQEFIAIT 214

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE---GRTDNSGDFTKGANLTSEQIDIMVS 242
            D    E+ +VL       +   + V   + E          D    A       +I ++
Sbjct: 215 DDRINLEKWLVLSKNITSIEEIPESVLSEIKEELGKWLIAGEDTIVYAEGGDYAANIEMA 274

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
               +   +  E  EL K    G K  +E+    E+  +    +        +V  L   
Sbjct: 275 SSQFEPNVAYTEELELEKVATPGAKTIDEVSKFLEIDEEQTVKTLVYHADDELVVILLNG 334

Query: 303 TGCVYEAILGFP 314
              + E  L   
Sbjct: 335 NDQLNEVKLTNY 346



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 21/125 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      L+     D  ++       + LR  G +  +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRNERA-GVKFADSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ +  G    + G++++K  A G+                   + I   ELV+T+ 
Sbjct: 572 IGLPVRVTIGKK-AAEGVVEVKIRATGE------------------VVEINKDELVNTI- 611

Query: 487 KILQE 491
           +IL +
Sbjct: 612 EILSK 616


>gi|157165397|ref|YP_001466693.1| prolyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|171855061|sp|A7ZD35|SYP_CAMC1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112800481|gb|EAT97825.1| prolyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 566

 Score = 47.9 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 2/80 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                       +I +   D   +       + L+ AG+   +   + + FG ++   + 
Sbjct: 464 IWKKECAPFDVEIIISNLKDEAGVKFAFELYESLKKAGVSVIIDDRNER-FGVKMNDFEL 522

Query: 427 RNCPLAIIQGTGERSRGMLQ 446
              P A++ G  E + G ++
Sbjct: 523 IGFPYALLVG-KEFANGKVE 541



 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 9/101 (8%), Positives = 29/101 (28%), Gaps = 4/101 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G  +       + ++I   ++      G   +   ++   + L K     +   K 
Sbjct: 34  QIGSGLYNYLPLGKIMHDKISRVVKEEMNEAGALEVSFSVVTSGE-LWKQSGRYNVFGKE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
           +   +D       +     +    L R    ++  +     
Sbjct: 93  LLRFKDRKDNDFVISPTNEEAAVALVRGKVTSYKQLPLNLY 133


>gi|321252491|ref|XP_003192424.1| threonine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458892|gb|ADV20637.1| Threonine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 771

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 6/110 (5%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +          Q   +  + AG+ AE+ L  +     +++ A        ++ G  
Sbjct: 667 QVVVIPVAKPFTEYAQKVAKTFQEAGLYAEVDLTDN-TLNKKIRNAQTAQWNFIMVVGQD 725

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           E     + I++     +        E+   +R  +  + + E  + V K 
Sbjct: 726 ELDAQAVNIRNRDDEVQ-----GREETVVLSRAVEQIVKLKESKAAVSKF 770



 Score = 41.7 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI N ++  I+  Y   GF  + +P + ++ +L K         + +F L
Sbjct: 382 GSAFFLPMGMRIYNTLMTFIKEEYFKRGFSEVGSPNI-FNANLWKTSGHWQNYAEDMFQL 440

Query: 74  QDDDGQWISLRYDLTAP 90
           +  D    +L+      
Sbjct: 441 K-VDEDQFALKPMNCPG 456


>gi|315043510|ref|XP_003171131.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311344920|gb|EFR04123.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 523

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 9/117 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 79  GSPLFRPNGTHILNKLISFLRAQYRQYGFREVLTPNI-YKQSLWEVSGHWQNYKDDMYEV 137

Query: 74  QDDDG-------QWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                       +   L+          + ++       P R     P+ RNE  G 
Sbjct: 138 GGRGDTGDSTENETYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGS 194


>gi|282860361|ref|ZP_06269429.1| glycine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282586859|gb|EFB92096.1| glycine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 517

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/233 (8%), Positives = 49/233 (21%), Gaps = 29/233 (12%)

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP------VMNEKQKPVVFGS 327
                    G   +  +                 E  L F       + +     +    
Sbjct: 288 HRLAWHEGLGMGDDNYRFHDHDKLAHYANAATDIEFHLPFGFKEIEGIHSRTDFDLGQHE 347

Query: 328 VGGGGRYDGLVSRFKGQNVP-----------ATGFSIGISRLIVALKS----LESSTNNI 372
              G +             P                +  +     L++    +       
Sbjct: 348 KFSGRQIKYFDPDRNENYTPYVVETSIGVDRMFLTVMCHAYQEEQLENGSSRVVLKLPEP 407

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  +  + +      K Q     L          + +  + G + +  D    P  
Sbjct: 408 LAPIKCAVLPLVNKDGLPEKAQEIVNDL---KFHFTTHIEAKDSIGKRYRRQDAIGTPFC 464

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           +       + G + ++     ++    I       E R     + I+ L+  +
Sbjct: 465 VTVDGDTLTDGTVTLRYRDTMEQERVPIDKLREIIEDR-----VSITTLLKKI 512


>gi|296820624|ref|XP_002849971.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238837525|gb|EEQ27187.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 520

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 9/117 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 76  GSPLFRPNGTHILNKLISFLRAQYRQYGFREVLTPNI-YKQSLWEVSGHWQNYKDDMYEV 134

Query: 74  QDDD-------GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                       +   L+          + ++       P R     P+ RNE  G 
Sbjct: 135 GGRGNTAEATEDETYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGS 191


>gi|209548072|ref|YP_002279989.1| ATP phosphoribosyltransferase regulatory subunit [Rhizobium
          leguminosarum bv. trifolii WSM2304]
 gi|229464983|sp|B5ZRD1|HISZ_RHILW RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|209533828|gb|ACI53763.1| tRNA synthetase class II (G H P and S) [Rhizobium leguminosarum
          bv. trifolii WSM2304]
          Length = 373

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 43 DPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
          + I+TP+++ ++       ++ R  + +F  + + G  + LR + T P+ 
Sbjct: 23 ERIDTPVIQPAEPFLDIAGEDLR--RRIFMTESETGASLCLRPEFTIPVC 70


>gi|154175003|ref|YP_001408388.1| prolyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|166980112|sp|A7GYU6|SYP_CAMC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|112802606|gb|EAT99950.1| prolyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 567

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 39/122 (31%), Gaps = 20/122 (16%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                      ++ +   D   +       + LR  G+   +   + + FG ++   +  
Sbjct: 465 WKKECTPFECEIVISNLKDEAGVKFATKLYENLRNLGLCVLLDDRNER-FGVKMNDFELL 523

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P AII G G    G +++                       + +  +   E++S +K+
Sbjct: 524 GFPYAIIVGKG-LENGEVEL------------------ITRDGLVKEVVKKDEILSVLKE 564

Query: 488 IL 489
            L
Sbjct: 565 KL 566



 Score = 43.3 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 10/101 (9%), Positives = 30/101 (29%), Gaps = 4/101 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G  +       + ++I   ++   +  G   +   ++   + L K     +   K 
Sbjct: 34  QIGSGLYNFLPLGKMMLDKITKVVKEEMDAAGVLEVSFSVVTSGE-LWKQSGRFNVFGKE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
           +   +D       L     +    L R    ++  +     
Sbjct: 93  LLRFKDRKENDFVLSPTNEEAAVALVRGKVTSYKQLPLNIY 133


>gi|293363634|ref|ZP_06610386.1| glycine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552790|gb|EFF41548.1| glycine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 446

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/239 (10%), Positives = 59/239 (24%), Gaps = 18/239 (7%)

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            EQ   +  +           +          E    EL   S      G +        
Sbjct: 221 EEQAQDLYKYYIQKAYNFATLVGIKKDSIRIREHDKEELSHYSA-----GTSDIEFNFPF 275

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSI 353
                L       ++         E                  +V      ++      +
Sbjct: 276 GWGELLGIANRTNFDLNAHMKATGES------LEYLDPETNKKIVPYVIEPSMGLDRLML 329

Query: 354 GISRLIVALKSLESSTNN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE 408
            I      L+ LE++ +       KE+ P  I  +        + +     L    + A 
Sbjct: 330 AIICDAYELEELENNDSRIVLKFNKELSPYKIAVLPLVKKLEKEAREIYNFLLDKNVSAT 389

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
                + + G + +  D       +       +   + +++    +++  +IK+   + 
Sbjct: 390 --YDETGSIGKRYRRQDAVGTYWCLTYDYDSLNDQSVTLRNRDTMEQIRIKIKDIVKYL 446


>gi|256274272|gb|EEU09179.1| Mst1p [Saccharomyces cerevisiae JAY291]
          Length = 429

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 36/81 (44%), Gaps = 6/81 (7%)

Query: 14  GFADCPTKEIRIRNRILD--SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G         +I N++++   ++  ++ +GF+ + TPL+ Y  +L +     +     +F
Sbjct: 57  GSMFFLPNGAKIFNKLIEFMKLQQKFK-FGFNEVVTPLI-YKKTLWEKSGHWENYADDMF 114

Query: 72  SLQ--DDDGQWISLRYDLTAP 90
            ++  D++ +   L+      
Sbjct: 115 KVETTDEEKEEYGLKPMNCPG 135



 Score = 36.7 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 37/135 (27%), Gaps = 16/135 (11%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           D   S  +   +    F      + + + S        +     V+I     +   L   
Sbjct: 274 DQDNSYKRPIMIHRATFGSIERFMALLIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMC 333

Query: 394 QMYTQMLRTA--------------GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
               + LR                    ++ + +    G ++K A  +N    II G  E
Sbjct: 334 TALQKKLRNEREADDMEPVPLNDWHFNVDLDIRNEP-VGYRIKSAILKNYSYLIIVGDEE 392

Query: 440 RSRGMLQIKDLAKGK 454
                  I++    K
Sbjct: 393 VQLQKYNIRERDNRK 407


>gi|212550461|ref|YP_002308778.1| threonyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229470721|sp|B6YQ95|SYT_AZOPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212548699|dbj|BAG83367.1| threonyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 648

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +    +     +   +      IR  +    ++  G +++  + +  P  +I G  
Sbjct: 549 QVVILPVSENYNQYAEEIAKEFHKRDIRVTID-KRNEKVGRKIRDNELKKIPYLLIIGEK 607

Query: 439 ERSRGMLQIK 448
           ER    + ++
Sbjct: 608 ERRNSEISVR 617



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           RG      K  ++R R+ D ++ I + YG+  + TP +          
Sbjct: 262 RGLPLWLPKGTQLRLRLEDFLKRIQKKYGYQQVITPHIGNKTLYIASG 309


>gi|15806285|ref|NP_294990.1| prolyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|81858880|sp|Q9RUW4|SYP_DEIRA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|6459012|gb|AAF10837.1|AE001974_2 prolyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 499

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 7/110 (6%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       V++  +    +    + + +     LR  G+R ++         N  K
Sbjct: 293 GLMMPPRIAPIQVVVIPVGRKDNFDQMVQEGEKLAAELRAQGLRVKVDGRDG--VTNGFK 350

Query: 423 YAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           Y D   +  P+ I  G  +   G+L +K+     + +       S   AR
Sbjct: 351 YNDWELKGVPVRIELGPRDLESGVLVVKNRHSEDKETLPRAEAVSGMSAR 400


>gi|326407711|gb|ADZ64782.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 616

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 89/312 (28%), Gaps = 14/312 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++ + +R  ++  G   +  P L  +D L +     D   + ++ L
Sbjct: 38  GIYAYLPLANRVLEKLKNIMREEFDEIGAVELLAPSLLTAD-LWRESGRYDTYGEDLYKL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ--- 127
           ++ D     L     +    L R    ++  +      Y+I P FR+EK       +   
Sbjct: 97  KNRDNSDFILGPTHEETMTSLVRDEITSYKKLP--LNVYQIAPKFRDEKRPRYGLLRGRE 154

Query: 128 --FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                    +    +            + +           I            E I + 
Sbjct: 155 FLMKDGYSYHADQDSLDETYNDYKKAYEKIFERAGLNFKPIIADAGAMGGKDSQEFIAIT 214

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE---GRTDNSGDFTKGANLTSEQIDIMVS 242
            D    E+ +VL       +   + V   + E          D    A       +I ++
Sbjct: 215 DDRINLEKWLVLSKNITSIEEIPESVLSEIKEELGKWLIAGEDTIVYAEGGDYAANIEMA 274

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
               +   +  E  EL K    G K  +E+    E+  +    +        +V  L   
Sbjct: 275 SSQFEPNVAYTEELELEKVATPGAKTIDEVSKFLEIDEEQTVKTLVYHADDELVVILLNG 334

Query: 303 TGCVYEAILGFP 314
              + E  L   
Sbjct: 335 NDQLNEVKLTNY 346



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 21/125 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      L+     D  ++       + LR  G +  +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRNERA-GVKFADSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ +  G    + G++++K  A G+                   + I   ELV+T+ 
Sbjct: 572 IGLPVRVTIGKK-AAEGVVEVKIRATGE------------------VVEINKDELVNTI- 611

Query: 487 KILQE 491
           +IL +
Sbjct: 612 EILSK 616


>gi|167517909|ref|XP_001743295.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778394|gb|EDQ92009.1| predicted protein [Monosiga brevicollis MX1]
          Length = 421

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 6/131 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         R+  ++ + +R      G   I    L   D         D  +  +F 
Sbjct: 19  SGMYHMLPLAKRVLGKLENLVRAEMSAIGAQEISLSTLTGKDLWTHS-GRWDTVSSELFR 77

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           ++D  G    L     +    LA+           P   Y++   +R+E        +  
Sbjct: 78  VEDRRGAVYCLAPTHEEAITTLAKSYV--RSARNMPLYLYQLDRKYRDELRPRSGLLRGR 135

Query: 130 QCDVDNVGSSA 140
           +  + ++ +  
Sbjct: 136 EFYMKDLYTFD 146


>gi|148825906|ref|YP_001290659.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166223344|sp|A5UBX5|SYT_HAEIE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148716066|gb|ABQ98276.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 643

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/366 (12%), Positives = 100/366 (27%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L  AG+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQSDYVQQVVKTLSDAGLRVKADL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
            +L++ 
Sbjct: 637 LKLLNE 642



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|331087229|ref|ZP_08336299.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330408915|gb|EGG88376.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 479

 Score = 47.5 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 64/166 (38%), Gaps = 16/166 (9%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD---HDSDS 389
           +Y    ++ +  +  + G +  +   I+ +    S       + PV +  +         
Sbjct: 247 QYTDKENKLQYVHQTSWGMTTRMIGAIIMVHGDNSGLVLPPRIAPVQVMVIPIQQKKDGV 306

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L K     ++L+ AG+  ++   S K+ G +    + R  P+ I  G  +   G   +  
Sbjct: 307 LDKAYEVKEVLKKAGLSVKVD-DSDKSPGWKFSEQEMRGIPVRIELGPKDIEAGHAVVVR 365

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKK-ILQENKE 494
               +++    +  E+            ++E++ T++K +L+  +E
Sbjct: 366 RDTREKIIVPFEELET-----------KVAEVLDTMQKEMLERARE 400


>gi|291543338|emb|CBL16447.1| glycyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 459

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/229 (6%), Positives = 54/229 (23%), Gaps = 9/229 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +         K  +       E + + +   +     ++       +    +        
Sbjct: 233 EWFDYWRSFCKNWLLSLHIKEENLRLRDHDPEELCFYSKATTDFEYLFPFGWGELWGVAD 292

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---- 365
              + +    +              +  V      ++      + +       + +    
Sbjct: 293 RTDYDLNQHIKTSGKQLDYFDPETNERYVPYVIEPSLGVERLFLALLTEAYDEEEIAPGD 352

Query: 366 -ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +  +    + P     +        K     +ML             S + G + +  
Sbjct: 353 VRTVMHFHPALAPFKAAVLPLSKKLSEKATEVYEML-AKHFPV--DYDESGSIGKRYRRQ 409

Query: 425 DRRNCPLAIIQGTGERSR-GMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  I        +   + I+D    ++    I +  ++ E ++ 
Sbjct: 410 DEIGTPFCITYDFDTLEKDNCVTIRDRDTMEQERVAISDLVAYLEKKIE 458


>gi|254569696|ref|XP_002491958.1| Threonyl-tRNA synthetase, essential cytoplasmic protein [Pichia
           pastoris GS115]
 gi|238031755|emb|CAY69678.1| Threonyl-tRNA synthetase, essential cytoplasmic protein [Pichia
           pastoris GS115]
 gi|328351547|emb|CCA37946.1| threonyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 712

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N + D +R  Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 332 WLPHGTRIYNTLTDLLRTEYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 390

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 391 -ETFGLKPMNCPG 402



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 40/361 (11%), Positives = 105/361 (29%), Gaps = 27/361 (7%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           N+ +S     +       + +    +++  + +   N      + +       +      
Sbjct: 363 NMYNSKLWETSGHWANYKENMFTFEVEKETFGLKPMNCPGHCLMFKSRERSYRELPWRVA 422

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+  +    + D         +   ++I  +  FL       +  
Sbjct: 423 DFGVIHRNEFSGALSGLTRVRRFQQDDAH--IFCTQDQIEDEISNIFDFLKFIYG--LFG 478

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
               ++ +   EK   ++   +    K     N+      +  G   + G   + ++   
Sbjct: 479 FEFKMELSTRPEKFVGDIETWNNAEAKLENALNKWGGKWEVNPGDGAFYGPKIDIMISDA 538

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG-----ISRLIVALKSLESST 369
           +    Q   V        R++       GQ+       I          + A+ +   + 
Sbjct: 539 LKRWHQCATVQLDFQLPQRFELEYRTKDGQDDLTRPVMIHRAILGSVERMTAILTEHFAG 598

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + P  +  +          Q   Q L+   + A++ L  +     +++    +  
Sbjct: 599 KWPFWLSPRQVLIVPVGVKYFDYAQQVQQELKGLDLYADVDLSGN-TLQKKIRTGQLQRY 657

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL 489
               I G  E++   + +++        R+I+  ++  EA           LV  + K+L
Sbjct: 658 NFIFIVGEQEQNDKSVNVRN--------RDIQELQNKNEAVP---------LVDVIPKLL 700

Query: 490 Q 490
           Q
Sbjct: 701 Q 701


>gi|153938792|ref|YP_001392858.1| putative prolyl-tRNA synthetase [Clostridium botulinum F str.
           Langeland]
 gi|152934688|gb|ABS40186.1| putative prolyl-tRNA synthetase [Clostridium botulinum F str.
           Langeland]
 gi|295320836|gb|ADG01214.1| putative prolyl-tRNA synthetase [Clostridium botulinum F str.
           230613]
          Length = 545

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             L            V++T  +  D       +     L   GI   +     +  G + 
Sbjct: 435 DELGIVWPMETSAFKVIVTIANVKDEQQFKVGEKIYSSLVNIGIGTILDDRKERA-GVKF 493

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K AD    P+ I  G        ++IK     ++    I   +   ++
Sbjct: 494 KDADLWGIPIRITVGKN-IKENNVEIKLRNSKEKKEIPIDQLQESIKS 540


>gi|225017181|ref|ZP_03706373.1| hypothetical protein CLOSTMETH_01107 [Clostridium methylpentosum
           DSM 5476]
 gi|224950100|gb|EEG31309.1| hypothetical protein CLOSTMETH_01107 [Clostridium methylpentosum
           DSM 5476]
          Length = 482

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/245 (9%), Positives = 61/245 (24%), Gaps = 26/245 (10%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  H   +  K  +       E + + +   +   + +        V    +        
Sbjct: 257 EWFHYWKDACKNWLLSLGIKEENIRLRDHDPEELSHYSNATTDIEFVFPFGWGELWGIAD 316

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL---- 365
              F +   +             + +  V      ++ A   ++         + +    
Sbjct: 317 RTNFDLTQHQNHSGKSLEYFDQQKNEHYVPYVIEPSLGADRVALAFLCEAYDEEEIAEGD 376

Query: 366 -ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        +     + L        +    + + G + +  
Sbjct: 377 TRVVMHLHPALAPFKACVLPLSKKLNEQAGEVYEQLAKH---FMVDYDDTGSIGKRYRRQ 433

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           D    P+ I         G + ++D                     + Q  I I ELV  
Sbjct: 434 DEIGTPVCITYDFESVEDGCVTVRDRDT------------------MQQERIRIDELVGY 475

Query: 485 VKKIL 489
           ++K+L
Sbjct: 476 IEKML 480


>gi|255943789|ref|XP_002562662.1| Pc20g01010 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587397|emb|CAP85430.1| Pc20g01010 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1334

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 6/119 (5%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              VL+  +   +      Q  T  LR AG+   +   SS + G +    D    P  + 
Sbjct: 539 PTKVLLVPLSTHASFKPLTQRLTSKLRKAGVSNRVD-DSSASIGKRYSRNDELGTPFGVT 597

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                       ++D    K++           ++ V        E    ++K L E +
Sbjct: 598 VDFQSVQDNTFTLRDRDTTKQVRASEDEILQAVKSLVEG-----DETWEDIRKRLPEIR 651


>gi|153812523|ref|ZP_01965191.1| hypothetical protein RUMOBE_02922 [Ruminococcus obeum ATCC 29174]
 gi|149831448|gb|EDM86536.1| hypothetical protein RUMOBE_02922 [Ruminococcus obeum ATCC 29174]
          Length = 477

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 23/130 (17%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR-- 426
              I     V+I         L K       L+ AGIR ++   + ++ G   K+A++  
Sbjct: 284 PPRIAPTQAVIIPIQQRKEGVLEKADELFAALKAAGIRVKVD-DTDRSPG--FKFAEQEM 340

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           R  P+ I  G  +   G   I      ++                    +   EL + V+
Sbjct: 341 RGIPVRIECGPKDIENGQAVICRRDTREK------------------YVVSFEELAAKVQ 382

Query: 487 KILQENKEEI 496
           ++L   ++++
Sbjct: 383 EVLDTMQKDM 392


>gi|146282712|ref|YP_001172865.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166225484|sp|A4VM22|SYT_PSEU5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145570917|gb|ABP80023.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 640

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/142 (6%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  + TP +     L +         + +F+ 
Sbjct: 261 GMVFWHPAGWTLYQNLEQYMRQVQRENGYQEVRTPQVVDR-ILWEKSGHWSNYAENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              + +  +++        +   +   +                 +              
Sbjct: 319 TSSENRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + ++    AD +
Sbjct: 379 TQDDAHIFCTEEQVKKEAADFI 400



 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 38/341 (11%), Positives = 89/341 (26%), Gaps = 5/341 (1%)

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
                      R   + +     V        +      A+ +     +  DY +   N 
Sbjct: 274 QNLEQYMRQVQRENGYQEVRTPQVVDRILWEKSGHWSNYAENMFTTSSENRDYAVKPMNC 333

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
                I  +      D                   L G+ + +     D++  F     +
Sbjct: 334 PCHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGALHGI-MRVRGFTQDDAHIFCTEEQV 392

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             E  D +   L +  +    ++   +    A   G +EL   +E       N + +   
Sbjct: 393 KKEAADFIKLTLKVYADFGFSDIAMKLSTRPAKRVGSDELWDRAEGALAEALNESGLAWE 452

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--G 350
                G  Y     +  +      N +   + +            V+    +  P     
Sbjct: 453 YQPGEGAFYGPKIEF-TLRDCLGRNWQCGTLQYDPNLPERLDASYVAEDNSRQRPVMLHR 511

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
             +G     + +     +      + P     M+      +      + L  +G RA+  
Sbjct: 512 AILGSFERFIGMLIEHYAGAFPAWLAPTQAVIMNITDKQAAFAIEVEKTLVQSGFRAKCD 571

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
           L  ++  G +++       P  ++ G  E     + ++   
Sbjct: 572 L-RNEKIGFKIREHTLLKTPYLLVIGDREVETRSVAVRSRE 611


>gi|327481051|gb|AEA84361.1| threonyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 640

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/142 (6%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  + TP +     L +         + +F+ 
Sbjct: 261 GMVFWHPAGWTLYQNLEQYMRQVQRENGYQEVRTPQVVDR-ILWEKSGHWSNYAENMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              + +  +++        +   +   +                 +              
Sbjct: 319 TSSENRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + ++    AD +
Sbjct: 379 TQDDAHIFCTEEQVKKEAADFI 400



 Score = 43.7 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 38/341 (11%), Positives = 89/341 (26%), Gaps = 5/341 (1%)

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
                      R   + +     V        +      A+ +     +  DY +   N 
Sbjct: 274 QNLEQYMRQVQRENGYQEVRTPQVVDRILWEKSGHWSNYAENMFTTSSENRDYAVKPMNC 333

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
                I  +      D                   L G+ + +     D++  F     +
Sbjct: 334 PCHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGALHGI-MRVRGFTQDDAHIFCTEEQV 392

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             E  D +   L +  +    ++   +    A   G +EL   +E       N + +   
Sbjct: 393 KKEAADFIKLTLKVYADFGFSDIAMKLSTRPAKRVGSDELWDRAESALAEALNESGLAWE 452

Query: 293 STIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--G 350
                G  Y     +  +      N +   + +            V+    +  P     
Sbjct: 453 YQPGEGAFYGPKIEF-TLRDCLGRNWQCGTLQYDPNLPERLDASYVAEDNSRQRPVMLHR 511

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
             +G     + +     +      + P     M+      +      + L  +G RA+  
Sbjct: 512 AILGSFERFIGMLIEHYAGAFPAWLAPTQAVIMNITDKQAAFAIEVEKTLVQSGFRAKCD 571

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
           L  ++  G +++       P  ++ G  E     + ++   
Sbjct: 572 L-RNEKIGFKIREHTLLKTPYLLVIGDREVETRSVAVRSRE 611


>gi|317969639|ref|ZP_07971029.1| prolyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 633

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 2/75 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         R+  ++   +R      G      P L+ S+   +        +    +
Sbjct: 62  SGIYAYLPLLWRVLQKVSAVVREELNAAGALETLLPQLQPSELWQRSGRWAGYTDGEGIM 121

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G+ + L  
Sbjct: 122 FHLEDRQGRELGLGP 136


>gi|261837685|gb|ACX97451.1| prolyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 577

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + LR  
Sbjct: 448 CYGIGISRLLSAILEQKSDNLGCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLRQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKN 462
           G+ A +    ++ FG +++  +     LA+I G         + IK     K+  ++ + 
Sbjct: 508 GVDALLDDRDAR-FGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTEL 566

Query: 463 NESWREARVAQ 473
            E   E   ++
Sbjct: 567 EEKILEMLESE 577



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I ++     + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENATHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|291458568|ref|ZP_06597958.1| glycine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291419101|gb|EFE92820.1| glycine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 476

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/228 (7%), Positives = 60/228 (26%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +  K  +       +++   +  ++     ++       +    +        
Sbjct: 251 EWFQYWKDYCKNWLLTLGLPGKMLRARDHDKEELSFYSKATTDLEFLFPFGWGELWGIAD 310

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   ++      S       D  +      ++ A   ++        ++ LE   
Sbjct: 311 RTDYDLSRHQEISGQDMSYFDDETKDHYIPYVIEPSLGADRVTLAFLCAAYDVEELEGGE 370

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV I  +          +     L       E       N G + +  
Sbjct: 371 ERTVLRFHPAIAPVKIGVLPLSKKLSEGAEKICTELSRR-WYCE--YDDRGNIGKRYRRQ 427

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + +++    +++   I +   + E +++
Sbjct: 428 DEIGTPYCVTYDFDSEEDGCVTVRERDSMQQVRLPIASLPEYFEEKLS 475


>gi|187250976|ref|YP_001875458.1| threonyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971136|gb|ACC98121.1| Threonyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 583

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    D     +   + ++ AG+RAE+     +  G +++ A     P +I
Sbjct: 477 WLAPVQVKLLTLTDDQFDFAKDVVKQMKLAGLRAELD-SRPEKLGLKIREAHVEKIPYSI 535

Query: 434 IQGTGERSRGMLQIKDLAKGKELS 457
           + G  E     L ++ L  GK + 
Sbjct: 536 VIGAKEAENKTLTLR-LRSGKNVE 558



 Score = 41.4 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 65/228 (28%), Gaps = 9/228 (3%)

Query: 19  PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
             K   +R  + D IR+    +G+D + +P +       K     +  ++ +F   + D 
Sbjct: 204 HPKGGMLRKVVEDWIRDENIKHGYDLVYSPHIARLHLWQKS-GHANFYSENMFQPIEVDD 262

Query: 79  QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
           Q   L+  +  P       +        R+YR  PV   E     R+ +           
Sbjct: 263 QQYQLKP-MNCPF------HIAIYESHLRSYRDLPVRLAELGTVYRYERSGVVHGLLRVR 315

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
                DA +          +    N   + +      +    ++    + K        +
Sbjct: 316 GFTQDDAHIFCTPEQMNGEIEDCFNFAMLVMKTFG-FEKFSVELSTWDETKPENYTGGKK 374

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
             ++        +K                G  +  + +D +  +  +
Sbjct: 375 DWEEAQNALESVLKKNNVPFTVHAGEAAFYGPKIDIKVMDAIGRYWQL 422


>gi|149178521|ref|ZP_01857109.1| glycyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148842636|gb|EDL57011.1| glycyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 555

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/326 (11%), Positives = 88/326 (26%), Gaps = 24/326 (7%)

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
           ++   +A   ++   +    +    +R+     +E      +     +    R      K
Sbjct: 252 KVPFGIAQIGKSFRNEITPRNYIFRSREFEQMEMEFFCHPDESFEWYQYWRDRRYAWYIK 311

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
            G+    L+L +   +    ++ G          M      +LE   H     ++  + G
Sbjct: 312 HGIAEDNLILRDHTQEELAHYSVGTADVEYAFPFMEENEYGELEGIAHRGDFDLRSHMEG 371

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           +           +V K+ +   + K S   +   +  T    E  +   +          
Sbjct: 372 KLVRE---GDQLVVEKNEHGQPKYKGSGKDLTYFDDQTR---ERFIPHVIEPAAGADRAT 425

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
            +      Y+      KG     T                    +         +  +  
Sbjct: 426 LAFLCEAYYEDEQPDEKGNMQTRTVMRF----------------HPRLAPVKAAVFPLIK 469

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
            +          Q L++AGI+A          G + +  D    P  +           +
Sbjct: 470 KAGMPEIASSIYQRLKSAGIQA--VYDQQGAIGRRYRRQDEIGTPFCLTVDGETEQDNCV 527

Query: 446 QIKDLAKGKELSREIKNNESWREARV 471
            ++D    +++   I +  +    R+
Sbjct: 528 TLRDRDTLEQVRIPIDDVVTEIHKRI 553


>gi|330861019|emb|CBX71291.1| hypothetical protein YEW_JY42990 [Yersinia enterocolitica W22703]
          Length = 195

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 15/115 (13%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+         Q  T+ L+ AGIRA+  L  ++  G +++    R  P  +
Sbjct: 89  WLAPVQVVVMNITDSQSDYVQQVTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYML 147

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           + G  E   G + ++        +R  K+  S        + + + +L++ ++  
Sbjct: 148 VCGDKEVESGKIAVR--------TRRGKDLGSLD------VNVVVDQLLAEIRSR 188


>gi|315608143|ref|ZP_07883135.1| proline--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250112|gb|EFU30109.1| proline--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 493

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 69/235 (29%), Gaps = 25/235 (10%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V ++   +         + S   R          EA++      +       G     
Sbjct: 194 LHVYAKFAEEWMAVPVVQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 +++               +RL+ AL                    V+I  +   
Sbjct: 254 SFDVTYLNKDNKPEYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVVIIPITKG 313

Query: 387 SDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
           +D L    +K Q     LR  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 ADQLQAINAKLQPVIDRLRDMGISVKYDDADNKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK-ILQENKE 494
               ++I      ++ S          E            L+  ++K +L++ K 
Sbjct: 372 EDNTIEIMRRDTLEKESVSFDGIAERVEG-----------LLEDIQKNLLEKAKN 415


>gi|153839390|ref|ZP_01992057.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747085|gb|EDM58073.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 287

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 76/265 (28%), Gaps = 10/265 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   + +  E    +              +   +        G +E+   SE   
Sbjct: 28  DDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLSTRPEKRVGSDEIWDQSEEAL 87

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYD 335
           K    S  I        G  Y     +        ++   +              G  Y 
Sbjct: 88  KQSLESMEIPYEIQEGEGAFYGPKIEFTLY---DCLDRAWQCGTVQLDFNLPGRLGATYV 144

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G  +      +        + R I  L    +            +  M+         Q 
Sbjct: 145 GENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVL-MNITDKQSGYVQE 203

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             Q L+ +GIRA+  L  ++  G +++    +  P  ++ G  E   G + ++       
Sbjct: 204 IVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDL 262

Query: 456 LSREIKNNESWREARVAQITIPISE 480
              ++ +  ++ +  ++   + + E
Sbjct: 263 GKFKVDDFIAYIQDEISSRKLNLEE 287


>gi|126662081|ref|ZP_01733080.1| prolyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126625460|gb|EAZ96149.1| prolyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 492

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/264 (10%), Positives = 69/264 (26%), Gaps = 33/264 (12%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E ++ +      + +       +           + +   R    
Sbjct: 168 EFLWQEGHTAHATRQEAIEESEKMMNVYADFAQNFMAI------PVIKGLKTETERFAGA 221

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G            ++   Q           +RL+ A
Sbjct: 222 DETYCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFANKEGKQEYVWGTSWGVSTRLMGA 281

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +    +       +       LR  GI  +    
Sbjct: 282 LVMTHSDDKGLVLPPNLAPIQVVIVPIYKTDEQFDAISEQVNALAAELRKLGISVKYDNR 341

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            ++  G +    + +  P+ I  G  +   G  +I                   R   ++
Sbjct: 342 DTQKPGFKFAEWELKGVPVRIALGPNDLENGTYEI------------------ARRDNLS 383

Query: 473 QITIPISELVSTVKKILQENKEEI 496
           +  +    + S ++ +L+  + ++
Sbjct: 384 KEVVSKEGVASYIQNLLETIQNDM 407


>gi|29345832|ref|NP_809335.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|73919769|sp|Q8AAP2|SYT_BACTN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|29337725|gb|AAO75529.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 646

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 44/135 (32%), Gaps = 3/135 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++              V I  +    +  ++     
Sbjct: 509 NQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKMY 568

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+   IRA +    ++  G +++  + +  P  +I G  E   G + ++   +G + +
Sbjct: 569 --LKMHEIRAIVD-DRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGT 625

Query: 458 REIKNNESWREARVA 472
            + +         V 
Sbjct: 626 MKYEEFAKILNEEVQ 640


>gi|319783887|ref|YP_004143363.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169775|gb|ADV13313.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 658

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 79/248 (31%), Gaps = 8/248 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG----EKGFNELVVIS 276
           D++  F     L +E + I    LS   +    E+   +          ++ ++    I 
Sbjct: 391 DDAHIFCTEEQLAAECLRINDLILSTYADFGFDEISVKLSTRPDKRVGTDEAWDHAEAIM 450

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
             V ++    +  +I ++I  G   + G  +E +L   +  E Q            R+  
Sbjct: 451 GGVLETIRTRSGNRIKTSINPGEGAFYGPKFEYVLKDAIGREWQCGTTQVDFNLPERFGA 510

Query: 337 LVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                  +            G     + +     S +      P+ +      SD+    
Sbjct: 511 FYIGSDSEKKQPVMVHRAICGSMERFLGILIENYSGHFPLWFAPLQVVVATITSDADDYA 570

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 L+ AG+ AE  L  ++    +++       P+ ++ G  E     + ++ L   
Sbjct: 571 TEVVAKLKAAGLLAEADL-RNEKINYKVREHSLAKVPVILVCGKREAEEQTVNMRRLGSR 629

Query: 454 KELSREIK 461
            + S  + 
Sbjct: 630 DQESLGLD 637


>gi|298384716|ref|ZP_06994276.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298262995|gb|EFI05859.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 646

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 44/135 (32%), Gaps = 3/135 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++              V I  +    +  ++     
Sbjct: 509 NQKHRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPDQVAILPISEKFNEYAEQVKMY 568

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
             L+   IRA +    ++  G +++  + +  P  +I G  E   G + ++   +G + +
Sbjct: 569 --LKMHEIRAIVD-DRNEKIGRKIRDNEMKRIPYMLIVGEKEAENGEVSVRRQGEGDKGT 625

Query: 458 REIKNNESWREARVA 472
            + +         V 
Sbjct: 626 MKYEEFAKILNEEVQ 640


>gi|50302871|ref|XP_451373.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640504|emb|CAH02961.1| KLLA0A08448p [Kluyveromyces lactis]
          Length = 672

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 39/107 (36%), Gaps = 3/107 (2%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           +      +     L+ AGIRA      +   G +    + +  PL I  G  +  +  + 
Sbjct: 477 AKIHENARAIESRLKKAGIRAFGDYNDNYTPGWKFSQYELKGIPLRIELGPKDLEKEQVT 536

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                 GK++   + + E      + ++     +L +  K++   ++
Sbjct: 537 CVRRNDGKKIVVSLNDLEKRIPEILEEL---QQDLFNKAKELFDTHR 580


>gi|21227547|ref|NP_633469.1| pyrolysyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|74550423|sp|Q8PWY1|PYLS_METMA RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|20905927|gb|AAM31141.1| hypothetical protein MM_1445 [Methanosarcina mazei Go1]
          Length = 454

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 7/133 (5%)

Query: 28  RILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED-RPNKGVFSLQDDDGQWISLRYD 86
           ++   I   + + GF  I++P+L   + + +   D D   +K +F + D +     LR  
Sbjct: 245 KLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV-DKN---FCLRPM 300

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
           L   L  Y+ +    +  P + + IGP +R E  G     +F    ++     +      
Sbjct: 301 LAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTM--LNFCQMGSGCTREN 358

Query: 147 MCMMMADTLEAVG 159
           +  ++ D L  +G
Sbjct: 359 LESIITDFLNHLG 371


>gi|330940966|ref|XP_003306011.1| hypothetical protein PTT_19018 [Pyrenophora teres f. teres 0-1]
 gi|311316712|gb|EFQ85899.1| hypothetical protein PTT_19018 [Pyrenophora teres f. teres 0-1]
          Length = 657

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 6/116 (5%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VLI  +  + D     +     LR  GI   +   S  + G   +YA  D    PL 
Sbjct: 540 PTKVLIVPLSSNPDFEPFVRKLKDKLRRLGISNRVD-ASGASIGK--RYARNDELGTPLG 596

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           I             ++D    +++   +          V       S++ + + K 
Sbjct: 597 ITIDFQSIKDNTFTLRDRDTTEQVRSSLDEIAKAIANIVKGEE-KWSDVAARLPKF 651


>gi|260940036|ref|XP_002614318.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238852212|gb|EEQ41676.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 722

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N ++D +R  Y   G++ + TP + Y+  L +         + +FS 
Sbjct: 332 GSAFWLPHGTRIYNTLVDMLREEYRQRGYEEVITPNM-YNTKLWEISGHWGNYKENMFSF 390

Query: 74  QDDDGQWISLRYDLTAP 90
           + +      L+      
Sbjct: 391 EVEKD-TFGLKPMNCPG 406



 Score = 41.4 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 40/145 (27%), Gaps = 25/145 (17%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML-RTAGIRAEMFLGSS 414
            R+   L                 I  +          +     L +     A++ L  +
Sbjct: 594 ERMTAILTEHYKGKWPFWLSPR-QILVVPVGVKYFEYAEQLKDELVKKHKFYADVDLSGN 652

Query: 415 KNFGN----QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                    Q+            I G  E++   + I++    +E              +
Sbjct: 653 TLQKKVRNGQM-----LKYNFIFIVGEQEQAEHSVNIRNRDIQEE--------------Q 693

Query: 471 VAQITIPISELVSTVKKILQENKEE 495
               T+   E+V+ + K+ +E + +
Sbjct: 694 GKNATVKFEEVVAQLTKLKEELRSD 718


>gi|15611293|ref|NP_222944.1| prolyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135064|sp|Q9ZMJ6|SYP_HELPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|4154734|gb|AAD05795.1| PROLYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 576

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 1/78 (1%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
             ++  G  +      ++ ++I +      + +G   I         SL +     D+  
Sbjct: 32  IYQIGSGIYNFLPLAKKVLDKIENVTHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYG 90

Query: 68  KGVFSLQDDDGQWISLRY 85
           K +   +D       L  
Sbjct: 91  KELLVFKDRKDNDFVLSP 108



 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 2/107 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
            T N      V++ +   D           + L   G+ A +    ++ FG +++  +  
Sbjct: 471 WTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDALLDDRDAR-FGAKMRDFELI 529

Query: 428 NCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
              LA+I G         + IK     K+  ++I+  E   E   ++
Sbjct: 530 GERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEKILEMLASE 576


>gi|146296961|ref|YP_001180732.1| glycyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410537|gb|ABP67541.1| glycyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 434

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/106 (10%), Positives = 31/106 (29%), Gaps = 3/106 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +         +  +    + + K +     L     +  +    S + G + +  D 
Sbjct: 329 LHLHPAIAPVKAGVFPLLKREELVKKAKEIYNNL---KYKWIVQYDESGSIGKRYRRQDE 385

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              P  I           + I+D    +++   I+    + E ++ 
Sbjct: 386 IGTPFGITVDYQTLEDNTVTIRDRDTMEQVRVHIEEIIPYLEEKIE 431


>gi|222084996|ref|YP_002543525.1| ATP phosphoribosyltransferase protein [Agrobacterium radiobacter
           K84]
 gi|254801971|sp|B9J9Y2|HISZ_AGRRK RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|221722444|gb|ACM25600.1| ATP phosphoribosyltransferase protein [Agrobacterium radiobacter
           K84]
          Length = 372

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 88/312 (28%), Gaps = 41/312 (13%)

Query: 43  DPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTI 102
           D ++TP+++ ++       ++ R  + +F  + + G  + LR + T P+     E     
Sbjct: 23  DRVDTPIIQPAEPFLDMAGEDLR--RRIFLTESETGASLCLRPEFTIPVCLQHIETATGT 80

Query: 103 VFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETA------------------- 143
                        R E                ++ S+   A                   
Sbjct: 81  PKRYSYLGEIFRQRREGGQEFYQAGIEDLGDRDIASADARAVGDAIAILNRLVPGKALSV 140

Query: 144 ---DAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH-----GDDKLNERL- 194
              D  +   +   L      +        N   L+ +L ++         D    + L 
Sbjct: 141 TLGDQAVFEAVVQALGLPSGWQKRLIHAFGNMMQLETLLARLASPQPVTGLDPHALDFLT 200

Query: 195 --------IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                   + + +  +   +     +  L   R            L  E   ++  FLS+
Sbjct: 201 RGDEQGLVMHIDSTMQATGYSTNASRSPLEIARRLREKLVLSETRLDDEAFRVLEEFLSL 260

Query: 247 DLEKSMHELYELVKGTIAGEK---GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
            +  +            AG K              +  +G ++  I   +   R L+YYT
Sbjct: 261 SVPLADASSALAGFADAAGLKLGTALERFDARVAALANAGVDAGSIDYRAAFGRPLDYYT 320

Query: 304 GCVYEAILGFPV 315
           G V+E  +    
Sbjct: 321 GLVFEVTMEGSA 332


>gi|218886086|ref|YP_002435407.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226701453|sp|B8DPN2|SYT_DESVM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|218757040|gb|ACL07939.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 644

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    I  +   L+T  D  +D           L  AG+R E     ++  G +++ A 
Sbjct: 529 GAFPTWIVPVQARLLTVTDAQNDF---AMGARDQLVAAGLRVE-ADTRNEKLGYKVREAQ 584

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
               P  ++ G  E   G + ++ L  G+
Sbjct: 585 LEKIPYILVVGDKEVEAGGVNVR-LRNGE 612



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 2/91 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +R  + D +R  +   G++ ++ P L   +   K     D   + ++  
Sbjct: 261 GMVYWHPKGMLLRTILEDFLRKEHLKRGYELVQGPQLLRREVWEKS-GHYDNYRENMY-F 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
              D     ++             +  +   
Sbjct: 319 TVIDDNAYGVKPMNCVSHMLIYKSHLRSYRD 349


>gi|145230415|ref|XP_001389516.1| threonyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134055633|emb|CAK37279.1| unnamed protein product [Aspergillus niger]
          Length = 526

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 47/501 (9%), Positives = 119/501 (23%), Gaps = 75/501 (14%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y  YGF  + TP + Y  SL +           ++ +
Sbjct: 80  GSPLFLPNGTHIINKLITFLRTQYLQYGFREVLTPTI-YKRSLWEVSGHWQNYKDDMYEV 138

Query: 74  QDDD-----------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +               +   L+             +         +YR  P+   +    
Sbjct: 139 RGRGATGDTDGEAGEDESYGLKPMNCPG-------HCLLFKSQTHSYRELPIRYADFSPL 191

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            R                   D  +          +        + +    +    L   
Sbjct: 192 HRNEVSGSLSGLTRVRRFHQDDGHIFCRPQQIKGEIASALGFVDLVMTTFGLGPYRLVLS 251

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                D +                     +  L E   +   ++       +     +  
Sbjct: 252 TRPEKDFIG------------SLELWNSAEAQLREALDNTGREWAMNEGDGAFYGPKIDI 299

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
            L     K        +   +    G   L        +        K +  ++    + 
Sbjct: 300 QLQDKAGKYHQLSTIQLDMNLPQRFG---LEYQVAEGEEDYNPETPGKATPVMIHRANFG 356

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +   + A+L                                +       +   + +  A 
Sbjct: 357 SLERFLALLIEEYAG------------------RWPFWLSPRQGIVLTVNQDEAVVQQAH 398

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++    +         + T       S+    +            ++   S ++   +++
Sbjct: 399 EAAAKISGFRALQPGQMGTDAPQPISSVDSTFLI-----------DVD-SSGQSLNKKIQ 446

Query: 423 YADRRNCPLAIIQGTGERSRGMLQI--------KDLAKGKELSREIKNNESWREARVAQI 474
            A      L  I G  + +   + +        K   +G +  ++I       +A     
Sbjct: 447 RAKHMKYNLIFILGPKDVAASRITVDVTGQLQSKP-ERGVQKLQDILTQRLGEKALKNPR 505

Query: 475 TIPISELVSTVKKILQENKEE 495
            IP+   V  V ++L + +++
Sbjct: 506 AIPLP--VDDVHELLVQLEKQ 524


>gi|260896982|ref|ZP_05905478.1| threonine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308087658|gb|EFO37353.1| threonine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
          Length = 290

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 76/265 (28%), Gaps = 10/265 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   + +  E    +              +   +        G +E+   SE   
Sbjct: 31  DDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLSTRPEKRVGSDEIWDQSEEAL 90

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYD 335
           K    S  I        G  Y     +        ++   +              G  Y 
Sbjct: 91  KQSLESMEIPYEIQEGEGAFYGPKIEFTLY---DCLDRAWQCGTVQLDFNLPGRLGATYV 147

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G  +      +        + R I  L    +            +  M+         Q 
Sbjct: 148 GENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAVL-MNITDKQSGYVQE 206

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             Q L+ +GIRA+  L  ++  G +++    +  P  ++ G  E   G + ++       
Sbjct: 207 IVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDL 265

Query: 456 LSREIKNNESWREARVAQITIPISE 480
              ++ +  ++ +  ++   + + E
Sbjct: 266 GKFKVDDFIAYIQDEISSRKLNLEE 290


>gi|257051518|ref|YP_003129351.1| threonyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256690281|gb|ACV10618.1| threonyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 620

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 55/204 (26%), Gaps = 6/204 (2%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
            + + +     E V       + I+I                   LG P+ N   +  V 
Sbjct: 390 REFYEDNEAWVEDVVAELGKPSLIEIIPERHHYWSAKIDFAAIDGLGRPIENPTVQIDVE 449

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN----IKEMGPVLIT 381
            +      Y           +  +        L   L+   S              V   
Sbjct: 450 SAERFDIEYTDGTDSHHPPILHYSPSGGIERVLAALLEDTASMDTPQLPTWLSPTQVRFI 509

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            ++ DS  L   +     L  A +RA++     ++ G ++  A+    P  ++ G  E  
Sbjct: 510 PVNPDS-HLDYCEGLVDELEDADVRADID-DRDESVGKRIAKAETDWVPYYVVVGDREIE 567

Query: 442 RGMLQIKDLAKGKELSREIKNNES 465
              + +   A   E+         
Sbjct: 568 GETIGVNVRADDDEIDLTPAELRE 591



 Score = 37.1 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD-EDRPNKGVFSLQDD 76
              +   +R+ +++ + ++  +YG  P+ETP++   D   + + +   +  +  +  +  
Sbjct: 231 WYPRGKLVRDALMEYVNDLVVDYGGMPVETPIM--YDLGARSIDEHAGKFGERQYRFE-S 287

Query: 77  DGQWISLRY 85
             + + LR+
Sbjct: 288 GDRRMMLRF 296


>gi|289581656|ref|YP_003480122.1| glycyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289531209|gb|ADD05560.1| glycyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 630

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 5/109 (4%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V +  + +D +  S        LR  G+        S N G + +  D    P  + 
Sbjct: 525 PTFVGVFPLQNDDELESTADEIVADLRDVGLSVT--YDDSGNIGRRYRRQDEVGTPFCVT 582

Query: 435 QGTGERSRG--MLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                       + +++     +    +           A   +   EL
Sbjct: 583 VDYETLENEETTVTVRERDTTDQKRLSVSELPGIMAELRAG-ELEFDEL 630


>gi|25028734|ref|NP_738788.1| glycyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|23494020|dbj|BAC18988.1| putative glycyl-tRNA synthetase [Corynebacterium efficiens YS-314]
          Length = 473

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/93 (8%), Positives = 27/93 (29%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +    +     +     LR      E    +S   G + +  D    P  +    
Sbjct: 380 VAVLPLSKKPELSGPAEKLAAELRQF-WNVE--YDTSGAIGRRYRRQDEIGTPFCVTVDF 436

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    +++   +   + +   +
Sbjct: 437 DTLEDNAVTVRERDTMEQIRVPLDELQGYLAQQ 469


>gi|284046709|ref|YP_003397049.1| glycyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283950930|gb|ADB53674.1| glycyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 456

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 28/104 (26%), Gaps = 3/104 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +       V +  +          +     LR   +R +       + G + +  D 
Sbjct: 344 LRLHPRLAPVKVAVMPLLKKGGHPELAREIFADLR---VRMQGEYDEGGSIGKRYRRQDE 400

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              P  +           + ++D    +++   I +     E R
Sbjct: 401 IGTPWGVTIDHQSIEDQTVTLRDRDSLEQVRIAIDDLAPELERR 444


>gi|188588755|ref|YP_001919624.1| glycyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|251778464|ref|ZP_04821384.1| glycine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|188499036|gb|ACD52172.1| glycyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|243082779|gb|EES48669.1| glycine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 463

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/99 (10%), Positives = 27/99 (27%), Gaps = 3/99 (3%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + P     +                L +      +    + + G + +  D    
Sbjct: 363 HLHPALAPFKAAILPLSKKLSENALEVYSNL-SKKFN--IDFDETGSIGKRYRRQDEIGT 419

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           P  I           + I++    ++   +I   E++ E
Sbjct: 420 PYCITVDFDTLEDQCVTIRNRDTMEQERIKISELEAYIE 458


>gi|124022453|ref|YP_001016760.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|152112941|sp|A2C7N5|SYP_PROM3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|123962739|gb|ABM77495.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 599

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 32/115 (27%), Gaps = 4/115 (3%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--HDSDSLSK 392
           D              G S      +            +      +I  +    D      
Sbjct: 455 DKGTQEPFWMGCYGIGISRLAQAAVEQHHDEAGMNWPLAIAPFEVIIVVANIQDEVQQKL 514

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
            +     L+ A I   +   + +  G + K AD    P  I+ G    ++G +++
Sbjct: 515 AEQLYSELQAADIEVLLDDRNERA-GVKFKDADLIGIPWRIVVGRD-AAKGQVEL 567



 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 41/157 (26%), Gaps = 11/157 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  +I   ++   +  G      P L+ ++ L +          G   
Sbjct: 37  SGIYAYLPLMWRVLRKITAIVQEEMDATGALETLLPQLQPAE-LWRRSGRWQGYTAGEGL 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +F L+D  G+ + L     ++   LA    R   +   T+      +R     R      
Sbjct: 96  MFHLEDRQGRELGLGPTHEEVITSLAGDLLRSYRQLPVTLYQIQSKFRDEIRPRFGLMRG 155

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F            +        M           G
Sbjct: 156 REFIMKDAYSFHACEADLAMTYTAMDEAYQRIFSRCG 192


>gi|86158405|ref|YP_465190.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123736663|sp|Q2IJC0|SYT_ANADE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|85774916|gb|ABC81753.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 650

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 10/86 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          + N + D++R +    G+  ++TPLL ++  L +      +  + +F +
Sbjct: 267 GAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVKTPLL-FNKRLWETSGHWGKYRENMFLV 325

Query: 74  QDDDGQ---------WISLRYDLTAP 90
            D +             SL+      
Sbjct: 326 VDSESDPALALEDRCSFSLKPMNCPS 351



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 403 AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
            G R E+  GSS   G +++ A     P  ++ G  E   
Sbjct: 579 RGWRVEVD-GSSDKLGAKIRNAQLAKIPFTLVVGEKEVEA 617


>gi|73540970|ref|YP_295490.1| threonyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|123732957|sp|Q472N7|SYT_RALEJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72118383|gb|AAZ60646.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Ralstonia
           eutropha JMP134]
          Length = 635

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/96 (9%), Positives = 27/96 (28%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   +R      G+D + TP +       K         + +F +
Sbjct: 261 GMVFWHPKGWQVWQAVEQYMRGRLTAAGYDEVRTPQVMDRSLWEKS-GHWQNYKENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
            + + +  +++        +    +           
Sbjct: 319 TESEKRDYAIKPMNCPGHVQIF-NHGLRSYRDLPLR 353



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M+         +   Q L   G RA+  L  ++    +++    +  P  ++ G  
Sbjct: 540 QVVVMNIAESQAEYAENVVQSLLKQGFRAKADL-RNEKITYKIREHSLQKIPYLLVVGDK 598

Query: 439 ERSRGMLQIK 448
           ER    + ++
Sbjct: 599 ERDANQVAVR 608


>gi|71033673|ref|XP_766478.1| threonyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353435|gb|EAN34195.1| threonyl-tRNA synthetase,  putative [Theileria parva]
          Length = 779

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/361 (7%), Positives = 84/361 (23%), Gaps = 14/361 (3%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              R R + +    N+ S      +       + +    ++  ++ +   N      + +
Sbjct: 419 DNYRIRGYQEVITPNIFSCDLWKQSGHYDNYKENMYLFNLEDTEWGMKPMNCPGHCLMFK 478

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            + L                       L G+   +   + D++  F     +  E ++I+
Sbjct: 479 HLFLSYKQLPLRLADFGVLHRNELTGSLSGLTR-VRRFQQDDAHIFCTREQIMEEVLNIL 537

Query: 241 V-------SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG---YNSNRIK 290
                    F      K   +  + +      E     L                     
Sbjct: 538 TFIGKVYSLFDFRYEFKLSTKPAKALGDNELWEVAEKSLEEALNKTGAKWILNPGDGAFY 597

Query: 291 ISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
                V   +          +        +  + +         +      +   +    
Sbjct: 598 GPKIDVVLFDCLDREHQCGTIQLDFNLPIRFNLEYRDKSESSAENVRCGFNRPVIIHRAI 657

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
           F      + + L+  +             +  +      L       +     G   ++ 
Sbjct: 658 FGSIERFVAIVLEQTKGKLPFWLSPNQ--LLFIPITDSHLDYALELYEKFNALGYNVDVD 715

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             S+     ++K+  ++      I G  E     + ++     ++    +       E++
Sbjct: 716 -RSNNTINKKIKFGQQQRWNYMGIVGDREVETRTVSLRPRDSDEQNVVSLDELVKLFESQ 774

Query: 471 V 471
            
Sbjct: 775 Q 775



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
                 +I NR+++ +R+ Y   G+  + TP +   D L K     D   + ++  
Sbjct: 402 WLPNGAKIYNRLVEFMRDNYRIRGYQEVITPNIFSCD-LWKQSGHYDNYKENMYLF 456


>gi|331091565|ref|ZP_08340402.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330403730|gb|EGG83284.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 462

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/228 (7%), Positives = 59/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      +     +       + V   +   +     ++       +    +        
Sbjct: 237 EWFAYWKKFCLDWLYSLGLKEDEVRARDHSPEELCFYSKATTDVEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES-- 367
              + +   ++      +     + +  +      ++ A    +         + LE   
Sbjct: 297 RTDYDLSQHQEVSKQDMTYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDEEELEGGD 356

Query: 368 ---STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P+ I  +          +     L +     E       N G + +  
Sbjct: 357 VRTVMHFHPALAPIKIGVLPLSKKLNEGAEKVFAEL-SKTYNCEFD--DRGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  +         G + ++D    ++   +I++ +++ E +  
Sbjct: 414 DEIGTPFCVTYDFDSEEDGAVTVRDRDTMEQERIKIEDLKAYFEKKFE 461


>gi|154148459|ref|YP_001406198.1| threonyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|171769701|sp|A7I107|SYT_CAMHC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|153804468|gb|ABS51475.1| threonyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 609

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/95 (9%), Positives = 41/95 (43%), Gaps = 1/95 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           ++ +  +   L+  +   + L    + +E+ L  ++    +++ A++   P+ ++ G  E
Sbjct: 514 VSIIPINDAHLNYAKEVQKALANLEVDSEI-LSKNETLNKRIRTAEKGRVPMILVLGDNE 572

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                + ++D     + +  +     + + ++ ++
Sbjct: 573 VKNRSVALRDRRARAQSNLSLDEFLEFVKNKLNEV 607



 Score = 41.4 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+R+++   +  ++   G++P+  P +  +D+  K         + ++  
Sbjct: 235 GLPVWLPNGARMRSKLEKILFGVHRRRGYEPVRGPEILKADA-WKISGHYTNYKENMY-F 292

Query: 74  QDDDGQWISLRYDLTAP 90
              D Q   ++      
Sbjct: 293 TKIDEQEYGIKPMNCVG 309


>gi|152990768|ref|YP_001356490.1| prolyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166980135|sp|A6Q3S4|SYP_NITSB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|151422629|dbj|BAF70133.1| prolyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 569

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/109 (8%), Positives = 31/109 (28%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              ++  G  +      ++ ++I   ++   +  G   +    +   + L +      + 
Sbjct: 31  FITQVASGIYNFLPIGKKVLDKIRAIVKEELDKAGCQEVSLGFVTPCE-LWEESGRLGKY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
            K +   +D       L     ++   L R    ++  +          
Sbjct: 90  GKELLRFKDRKENCFVLGPTHEEMMVDLVRNRVTSYKQLPLNLYQINWK 138



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I      +I +   D + ++  +   + L+ AG+   +     + FG ++K  + 
Sbjct: 464 IWPLQIAPFEVDIIVSNIKDEEQIAFGEELYEQLKNAGVDVILDDRPER-FGPKIKDFEL 522

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
              P  II G G    G +QI       ++    ++ 
Sbjct: 523 IGFPYGIIVGKG-LKEGTVQIVQRETLDKVEIPKEDV 558


>gi|83949530|ref|ZP_00958263.1| prolyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83837429|gb|EAP76725.1| prolyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 452

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 33/109 (30%), Gaps = 4/109 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +   G         ++   I   +    +  G  P+  P L+ +D L +     D  
Sbjct: 31  MIKQSSAGIYSWLPLGYKVLRNIETIVHEEQQRVGHIPMLMPTLQSAD-LWRESGRYDAY 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
              +  ++D   + +       ++   + R    ++  +       +  
Sbjct: 90  GPEMLRIRDRQDRDMLFGPTNEEMITDIFRSHVSSYKDLPLTLYHIQWK 138


>gi|313158764|gb|EFR58151.1| proline--tRNA ligase [Alistipes sp. HGB5]
          Length = 494

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 71/257 (27%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNELVVISE----LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E   +         +       +   S   R          EA+
Sbjct: 173 WQEGHTAHATREEAVEEAEKMIHVYQRFAEEWMSLPVVVGHKSPNERFAGAEDTLTIEAL 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           V++               +RL+ AL      + 
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKAFDVQYVNKEGKLEYVWATSWGVSTRLMGALIMAHSDNN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQ----MYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V++  +    D L++ +         L+  GI  ++      N  +  
Sbjct: 293 GLVLPPKLAPIQVVMIPIYKGDDQLAEIRTRFEAIAAQLKAKGISVKIDDRD--NVRSGF 350

Query: 422 KYA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+A  + +  P+ +  G  +   G +++                   R   + + T+   
Sbjct: 351 KFAEYELKGVPVRLAMGPRDMENGTIEL------------------VRRDTLEKQTVSQE 392

Query: 480 ELVSTVKKILQENKEEI 496
            LV  ++ ++ E +E I
Sbjct: 393 GLVERIEGLMTEIQENI 409


>gi|317054829|ref|YP_004103296.1| prolyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447098|gb|ADU20662.1| prolyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 480

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 73/252 (28%), Gaps = 29/252 (11%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             E        E+   E   +             + +        + + G      +   
Sbjct: 162 WQEGHTIHETPEEAIEETERMLNCYADFCEKDLAMPVVKGRKTDSDKFAGAEATYAIEAL 221

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN-----VPATGFSIGISRLIVALKSLESS- 368
           + + K          G G       +F G++        T + +    +   + +     
Sbjct: 222 MHDGKALQAGTSHYFGDGFAKAFGIQFTGRDNKLAFPHQTSWGVTTRLIGAIIMTHGDDN 281

Query: 369 ----TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  +  +  V++         L K     + L+ AGIR ++   S ++ G +    
Sbjct: 282 GLVLPPAVAPIQAVIVPVQQFKEGVLEKANEVYEQLKAAGIRVKLD-DSDQSPGWKFAEY 340

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + +  P+ I  G  +   G   I                   R  R    T P++ELV T
Sbjct: 341 EMKGVPVRIELGPKDIENGQCVI-----------------VTRHDREKTFT-PLTELVET 382

Query: 485 VKKILQENKEEI 496
           V   L+  +E I
Sbjct: 383 VNAKLEAVREGI 394


>gi|296203929|ref|XP_002749128.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Callithrix jacchus]
          Length = 726

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 34/116 (29%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 577 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 636

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +      G  A++ L  S     +++ A        ++ G  E+    + ++
Sbjct: 637 ALQVSSEFFEEGFMADIDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKINNAVNVR 692



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + ++  L +        ++ +F+ + + 
Sbjct: 348 FLPRGAFIYNTLVDFIREEYHKRDFTEVLSPNM-FNSKLWEASGHWQHYSENMFTFEIEK 406

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 407 D-TFALKPMNCPGHCLMFAHR 426


>gi|291533207|emb|CBL06320.1| Prolyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 253

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 32/103 (31%), Gaps = 1/103 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     V++     D   +   +     ++  GI   +     +  G + K AD 
Sbjct: 147 IWPASIAPFEVVIVPINAKDEAQMQIAEKLYADMKNVGIDVLLDDRKDRA-GVKFKDADL 205

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              P+ I           ++IK    G   + ++ +     + 
Sbjct: 206 IGYPVRITVSPKLLDANEVEIKVRRDGATSNVKVDDCAQTVKD 248


>gi|310829040|ref|YP_003961397.1| glycyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308740774|gb|ADO38434.1| glycyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 461

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/187 (7%), Positives = 40/187 (21%), Gaps = 8/187 (4%)

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
                                ++        N   K + +       +Y   V       
Sbjct: 278 DVEFLFPFGWGELWGIADRTDFDLT---QHQNVSGKDMQYQDPVTNEKYLPYVIEPSLGA 334

Query: 346 VPATGFSIGISRLIVALK--SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
                  +  +     L+     +       +       +        K       L   
Sbjct: 335 DRMFLAFLCNAMEKETLENGEERNVMKIHPALSAYKAAVLPLSKKLSEKATEVYAQLAKH 394

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
                +    + + G + +  D    P+ I      +    + ++D    +++   I   
Sbjct: 395 ---FMVDYDEAGSIGKRYRRQDEIGTPICITVDFDTQEDNAVTLRDRDTMEQVRLPIDEV 451

Query: 464 ESWREAR 470
             + E +
Sbjct: 452 VGYIEKK 458


>gi|257095791|ref|YP_003169432.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048315|gb|ACV37503.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 641

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 2/112 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  +++  +R   E   +  + TP +     L +         + +F+ 
Sbjct: 261 GSVFWHPKGWALFQQLIGYMRTRQERADYVEVNTPDVMDRG-LWETSGHWFNYREAMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
             +D +  +L+           A+   +    P R    G V R E  G   
Sbjct: 320 TTEDERVFALKPMNCPGAVSLFAQRLKSYRDLPLRMAEFGKVHRYEPSGSLH 371



 Score = 43.7 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 76/233 (32%), Gaps = 10/233 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   A +  E    +    +I  +    ++   +    A   G +E     E   
Sbjct: 382 DDAHIFCTAAQMQDECASTIALVFAIYRDFGFDDVAVKLSTRPANRIGSDETWDQLEG-- 439

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV-- 338
                 +R+ I   I  G   + G   E +L   +  + Q   +   +    R+D     
Sbjct: 440 ALSGALDRMGIECRINPGEGAFYGPKLEFVLRDAIGRDWQCGTLQVDLNLPERFDISYIN 499

Query: 339 ---SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
               R +   +    F        + ++               ++  +          + 
Sbjct: 500 ERGERERPVMLHRALFGSLERFTGILIEHYSGLFPLWLAPQQAVVLNISEGQS--DYAKS 557

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             Q L+  G+RA + L  ++  G +++    +  P  ++ G  E++ G + ++
Sbjct: 558 VLQALKRVGVRATVDL-RNEKIGYKIREYSLQKVPYLLVVGDMEKAEGRVALR 609


>gi|116072890|ref|ZP_01470155.1| prolyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116064416|gb|EAU70177.1| prolyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 593

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 2/75 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         ++  RI   +R+     G      P L  ++   +    +        +
Sbjct: 37  SGIYGYLPLMWKVIQRITAIVRDELNKAGAQETLLPQLHPAELWQRSGRWQGYTAGEGIM 96

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G+ + L  
Sbjct: 97  FHLEDRQGRELGLGP 111



 Score = 44.1 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 85/303 (28%), Gaps = 24/303 (7%)

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLR-AIDKLDKFGLQGVKLLLGEGRTDNS 223
                 +   L  +L  I    D      LI LR   D  +   +  V  L G+   D  
Sbjct: 269 CQSHGWHPSQLIKVLLFIARLDDGVEQPLLISLRGDQDLNEVKLINAVGRLTGQDILD-- 326

Query: 224 GDFTKGANLTSEQIDIM-VSFLSIDLEKSMH-----ELYELVKGTIAGEKGFNELVVISE 277
               +  +L  + ID + + F+  DL  ++         + ++ T       + ++  + 
Sbjct: 327 CRPIQAEDLDKQGIDTIPLGFIGPDLNDAVLRSARSWTKQFLRCTDGTAAAMDRMICGAN 386

Query: 278 LVRKSG----YNSNRIKISSTIVRGLEYYTGCVY--EAILGFPVMNEKQKPVVFGSVGGG 331
              +      ++       S  +R       CV+  EA L      E       G     
Sbjct: 387 QTDQHRISVTWDDLGGTPKSLDLRKARAGEACVHNPEAHLIEKRGIEVGHIFQLGRKYSE 446

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMDH 385
                  +          G        +                         ++   + 
Sbjct: 447 AMDSRFTNEAGKTEHFWMGCYGIGISRLAQAAVEQHHDDAGICWPPAIAPYEAIVVVANM 506

Query: 386 DSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
              + ++  +   + L  AG+ A       +  G + K AD    P  ++ G      G+
Sbjct: 507 QDQTQAELGESLYEQLLAAGVDALFDDRKERA-GVKFKDADLIGIPWRVVVGRD-AGDGV 564

Query: 445 LQI 447
           +++
Sbjct: 565 VEL 567


>gi|323358281|ref|YP_004224677.1| glycyl-tRNA synthetase (class II) [Microbacterium testaceum
           StLB037]
 gi|323274652|dbj|BAJ74797.1| glycyl-tRNA synthetase (class II) [Microbacterium testaceum
           StLB037]
          Length = 462

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 25/93 (26%), Gaps = 2/93 (2%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  +       +     LR AG    +    +   G + +  D    P  +    
Sbjct: 368 VAVLPLSRNERLSPLARETADTLRAAGWN--IDFDDAGAIGRRYRRQDEIGTPFCVTVDF 425

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + ++D     +    +     +   R
Sbjct: 426 DSLDDNAVTVRDRDTMGQERIGLDALHGYLAER 458


>gi|149373221|ref|ZP_01892041.1| prolyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149354255|gb|EDM42826.1| prolyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 492

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 63/230 (27%), Gaps = 17/230 (7%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E ++ +      + + V     +           + +   R    
Sbjct: 168 EFLWQEGHTAHTTKKEAIEESERMMNVYADFVQDFMAI------PVVKGLKTESERFAGA 221

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G            ++   Q           +RL+ A
Sbjct: 222 EETYCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFATKEGKQEYVWGTSWGVSTRLMGA 281

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +  + +               LR  G+R +    
Sbjct: 282 LVMTHSDDKGLVLPPNLAPDQVVIVPIYRNDEQFDAVSEAANELMAALRAKGVRVKFDNR 341

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREI 460
            +   G +    + +  P+ I  G  +   G  ++  +D    + LS+++
Sbjct: 342 DTHKPGWKFNEYELKGVPVRIAIGPKDLENGTFEVARRDTLTKEVLSKDV 391


>gi|210616985|ref|ZP_03291320.1| hypothetical protein CLONEX_03542 [Clostridium nexile DSM 1787]
 gi|210149508|gb|EEA80517.1| hypothetical protein CLONEX_03542 [Clostridium nexile DSM 1787]
          Length = 480

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 12/115 (10%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I    H    L K       L+ AG RA++   S K+ G +    +    P  I  G  +
Sbjct: 297 IPIAQHKEGVLEKADELLAALKAAGYRAKID-DSEKSPGWKFSEQEILGIPTRIEIGPKD 355

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
             +  + +      +++   I            +IT  + E++ T++K + E  +
Sbjct: 356 IEKNQVVVVRRDTREKIVVSID-----------EITTKLGEILETIQKDMYEKAK 399


>gi|203288149|ref|YP_002223164.1| threonyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|238690577|sp|B5RQ59|SYT_BORRA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|201085369|gb|ACH94943.1| threonyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 583

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +  +S             +  GIR +     +     +++    +  P   I G  
Sbjct: 485 QVVIIPVNSIVEEYALEVLSRFQNEGIRIKFDNYYNMRMNAKIRQYQSKKVPYMFIIGER 544

Query: 439 ERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQITI 476
           E   G + I+     ++++  E+K    + + +++   I
Sbjct: 545 EVVEGKISIRT-RTNEQINGLELKEALEFVKLKISNKEI 582


>gi|121997230|ref|YP_001002017.1| threonyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166223346|sp|A1WU53|SYT_HALHL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|121588635|gb|ABM61215.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Halorhodospira
           halophila SL1]
          Length = 640

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/360 (10%), Positives = 97/360 (26%), Gaps = 7/360 (1%)

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
           R   + +     +   +    +    M A+ +     +  DY +   N      + ++  
Sbjct: 285 RDNGYQEIHTPMLVDRSLWERSGHWAMFAENMFVTESESRDYAVKPMNCPCHVEVFKQGL 344

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
               D                   L G+ + +     D++  F     +  E    +   
Sbjct: 345 KSYRDLPLRLAEFGSCHRNEPSGTLHGL-MRVRGFVQDDAHIFCTENQIQEEVRTFIDLV 403

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                +    ++   +        G + L   +E    +   ++ +  +     G  Y  
Sbjct: 404 YRAYRDFGFEDVLIALSTRPDERVGDDALWDKAESALATALETHGLDYTLQPGEGAFYGP 463

Query: 304 GCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
              +        + +              G    D    R     +           + +
Sbjct: 464 KIEFSLRDCLERVWQLGTIQVDFSMPGRLGAQFVDDDGERRTPVMLHRAILGSLERFIGI 523

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            ++    +      + PV    ++         +   Q L  +G RAE  L  ++  G +
Sbjct: 524 LIEHYGGALPTW--LAPVQAVVLNITDRQADYARSVEQQLLESGFRAEADL-RNEKIGYK 580

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++    +  P  ++ G  E   G + ++        S E++   +     +A       +
Sbjct: 581 IREHTLQKVPYMLVLGDRELESGTVAVRHRDGTDLGSMELEELVARLSNDIAGHEREQED 640



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  R+   + D IR +  + G+  I TP+L       +         + +F  
Sbjct: 261 GMVFWHPRGWRLYLEVQDYIRRLMRDNGYQEIHTPMLVDRSLWERS-GHWAMFAENMFVT 319

Query: 74  QDDDGQWISLRYDLTA 89
           + +  +  +++     
Sbjct: 320 ESES-RDYAVKPMNCP 334


>gi|134292577|ref|YP_001116313.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|134135734|gb|ABO56848.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 402

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 27/102 (26%), Gaps = 4/102 (3%)

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + L+  E             I   +   D  +            G R      + +    
Sbjct: 286 ILLEHYEGWLPTWLAPDQ--IVVANIGDDHRAFADRAASAFEDIGCRVLRDFRAERLPRK 343

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
               A     P+  I G  E   G + ++ +  G++    I 
Sbjct: 344 IFD-ATELAAPIVAIAGRKEALAGEVSLR-MRGGEQHVMTID 383



 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 18 CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ-DD 76
             + + +   I + IR      GF  + TP +   D   +     ++    +FSL+ D 
Sbjct: 28 WHPRGMVLYRVIEEYIRVRMRQAGFSEVRTPQILSRDLWERS-GHWEKFGPNMFSLESDR 86

Query: 77 DGQWISLRY 85
          +     L+ 
Sbjct: 87 N--PYCLKP 93


>gi|254580109|ref|XP_002496040.1| ZYRO0C09086p [Zygosaccharomyces rouxii]
 gi|238938931|emb|CAR27107.1| ZYRO0C09086p [Zygosaccharomyces rouxii]
          Length = 716

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI + ++D ++N Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 332 WLPHGTRIYSTLVDLLKNEYRKRGYEEVITPNM-YNSKLWETSGHWGHYKENMFTFEVEK 390

Query: 78  GQWISLRYDLTAPLA 92
            +   L+       A
Sbjct: 391 -EMYGLKPMNCPGHA 404



 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/143 (11%), Positives = 43/143 (30%), Gaps = 23/143 (16%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             + A+ +   +      + P  I  +          Q     +  AG  A++ L  +  
Sbjct: 589 ERMTAILTEHFAGKWPFWLSPRQILVVPVGVKYQPYAQEVRDKMHNAGFYADVDLSGNTL 648

Query: 417 FGN----QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  Q+            I G  E +   + I++    ++              +  
Sbjct: 649 QKKVRNGQM-----LKYNFIFIVGEQEMNEKSVNIRNRDVMEQ--------------QGK 689

Query: 473 QITIPISELVSTVKKILQENKEE 495
             T+ +  ++  +KK+  + + +
Sbjct: 690 NATVSVETVLEQLKKLKSDMRND 712


>gi|262203036|ref|YP_003274244.1| glycyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262086383|gb|ACY22351.1| glycyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 463

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/258 (8%), Positives = 60/258 (23%), Gaps = 25/258 (9%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +   D+  D+     +  E +  +       L        ++          + EL
Sbjct: 227 EQWHQYWIDHRFDWYVQLGIDPENL-RLFEHPKDKLSHYSKRTVDVEYKFGFAGNPWGEL 285

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
             +      +  + +    +      L ++     E    F +           +     
Sbjct: 286 EGV-----ANRTDFDLSTHAKHSGEDLSFFDQASGERYTPFVIEPAAGLTRSLMAFLCDA 340

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                   +  + VP          ++   + L            V +  +  +     K
Sbjct: 341 --------YTEEEVPNAKGGTDTRTVLKLDRRL--------APIKVAVLPLSRNEKLSPK 384

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     LR      E     ++  G + +  D    P  +           + I++   
Sbjct: 385 ARDLAAELRQH-WNVEFD--DAQGIGKRYRRQDEIGTPFCVTVDFDTLDDQAVTIRERDT 441

Query: 453 GKELSREIKNNESWREAR 470
             +    +     +   +
Sbjct: 442 MSQERVALDKVAEYLAGK 459


>gi|238783384|ref|ZP_04627407.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715629|gb|EEQ07618.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 642

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 52/393 (13%), Positives = 109/393 (27%), Gaps = 25/393 (6%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAE-TADAEMCMMMADTLEA 157
           F           +    R +              +D V        +     M   + E 
Sbjct: 265 FWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAEHMFTTSSEN 324

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
                   +   + +    G+     L    +L E     R        GL  V+     
Sbjct: 325 REYCIKPMNCPGHVQIFNQGLKSYRDLPL--RLAEFGSCHRNEPSGALHGLMRVRG---- 378

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     +  E    +     +       ++   +        G +E    +E
Sbjct: 379 FTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTRPEKRIGSDEQWTRAE 438

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
               +    N I        G  Y     +          +    V       G      
Sbjct: 439 SDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLDRAWQCG-TVQLDFSLPGRLSASY 497

Query: 338 VSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           +     + VP       +G     + + + E +      + PV +  M+         Q 
Sbjct: 498 IGENNDRQVPVMIHRAILGSIERFIGILTEEYAGFFPTWLAPVQVVVMNITDSQSDYVQQ 557

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
            T+ L+ AGIRA+  L  ++  G +++    R  P  ++ G  E   G + ++       
Sbjct: 558 VTKKLQDAGIRAKADL-RNEKIGFKIREHTLRRVPYMLVCGDKEVESGKIAVR------- 609

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKKI 488
            +R  K+  S        + + + +L++ ++  
Sbjct: 610 -TRRGKDLGSLD------VNVVVDQLLAEIRSR 635



 Score = 39.8 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 55/204 (26%), Gaps = 13/204 (6%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRF 125
            + +F+    + +   ++        +   +   +    P R    G   RNE  G    
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRLAEFGSCHRNEPSGALH- 371

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
                     +     T D        + +             + +    + I+ K+   
Sbjct: 372 --------GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTR 423

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQ 209
            + ++       RA   L     +
Sbjct: 424 PEKRIGSDEQWTRAESDLAAALTE 447


>gi|71032677|ref|XP_765980.1| glycyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68352937|gb|EAN33697.1| glycyl-tRNA synthetase, putative [Theileria parva]
          Length = 874

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 34/115 (29%), Gaps = 5/115 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    S +         I  +                LR+ GI  ++   +  + G   +
Sbjct: 747 ERKYVSLHKSIAPTKCSILPLSSKEVFEPLISRVQSQLRSLGISHKVD-KTGASIGK--R 803

Query: 423 YA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           YA  D    P  +       +   + +++    +++  ++          +  IT
Sbjct: 804 YARTDEIGVPFCVTLDFQSVNDDTVTLRERDSMQQVRVKLDQVGQLLSNLLKDIT 858


>gi|203284615|ref|YP_002222355.1| threonyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|238690570|sp|B5RMR3|SYT_BORDL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|201084058|gb|ACH93649.1| threonyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 583

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +  +S             +  GIR +     +     +++    +  P   I G  
Sbjct: 485 QVVIIPVNSIVEEYALEVLSRFQNEGIRIKFDNYCNMRMNAKIRQYQSKKVPYMFIIGER 544

Query: 439 ERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQITI 476
           E   G + I+     ++++  E+K    + + +++   I
Sbjct: 545 EVVEGKISIRT-RTNEQINGLELKEALEFVKLKISNKEI 582


>gi|157964288|ref|YP_001499112.1| threonyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844064|gb|ABV84565.1| Threonyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 651

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/382 (9%), Positives = 93/382 (24%), Gaps = 10/382 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           +F         +                ++  +     V        +    +       
Sbjct: 270 HFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEVSGHWAKFR 329

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D +  +        +   N      I ++      D                   L G+ 
Sbjct: 330 DDMFVLETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGL- 388

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +T E +        +  +    ++            G +E+
Sbjct: 389 MRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEVRAGSDEV 448

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E   K          +     G  Y     +  +        +   +    V    
Sbjct: 449 WDKAENALKEAVEQAGFTYTLNPGEGAFYGPKLEF-VLTDAIGRQWQCGTLQMDFVLPER 507

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                V+    +  P       +G     + +   E +      + PV +      SD  
Sbjct: 508 LDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWLAPVQVAIATITSDLN 567

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  + L   G+R +  +   K    +++    +  P+  + G  E+    + I+ L
Sbjct: 568 DYALEVQKALIDNGVRTDFNISPDK-INYKIREFSNQKIPMIAVIGKQEQENKQVAIRRL 626

Query: 451 AKGKELSREIKNNESWREARVA 472
               +    ++   +  +    
Sbjct: 627 GTTDQEVLSVEQLIAVVKEENE 648



 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I N I   IR      G+  ++TP+L    SL +      +    +F L
Sbjct: 277 GMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDK-SLWEVSGHWAKFRDDMFVL 335

Query: 74  QDDDGQWISLRYDLTA 89
           +  D + ++L+     
Sbjct: 336 ET-DDKTLALKPMNCP 350


>gi|331092516|ref|ZP_08341338.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330400737|gb|EGG80340.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 480

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 12/108 (11%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I    H    L K       L+ AG    M   S K+ G +    + +  P  I  G  +
Sbjct: 297 IPIAQHKEGVLEKATELMNTLKAAGYAVNMD-SSDKSPGWKFSEQEMQGIPTRIEIGPKD 355

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
                + +      +++   +            +IT  + E++ T++K
Sbjct: 356 IENNQVVVVRRDTREKIVVSLD-----------EITTKLGEILETIQK 392


>gi|307198619|gb|EFN79469.1| Probable prolyl-tRNA synthetase, mitochondrial [Harpegnathos
           saltator]
          Length = 434

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 55/191 (28%), Gaps = 8/191 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+ N+++  I     + G + I  P L  S  L K     +     +F++
Sbjct: 52  GMYSILPLGMRVLNKLIKIIDKEMTDLGAEKIMLPAL-TSAKLWKKSNRYNSNKTELFTV 110

Query: 74  QDDDGQWISLRYDLTAPLARYV-AENFDTIVFPCRTYRIGPVFRNEK------HGPGRFR 126
            D   +   L       +   V A        P R Y+I   +R+E            F 
Sbjct: 111 TDRHDKEYILSPTYEEAICDLVSATYLPEKSLPLRLYQISSKWRDEMKPRLGFIRSREFI 170

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                  D   + A+     +C   ++  + +GI        +     L           
Sbjct: 171 MKDLYTFDTTLNKAQDTYNLVCESYSNIFKQIGIDHMKAVGDVGTIGGLSSHEYHYISDI 230

Query: 187 DDKLNERLIVL 197
            + +       
Sbjct: 231 GEDVILWCSSC 241


>gi|261367209|ref|ZP_05980092.1| glycine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282570808|gb|EFB76343.1| glycine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 473

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/236 (7%), Positives = 51/236 (21%), Gaps = 16/236 (6%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +         +       +  +          ++  +       +             Y
Sbjct: 242 WKDFCKNWLLSLGIKEENLRLRDHEAAELAFYSRATTDIEYAFPFTDWGELWGIADRTNY 301

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +         +      F           ++    G +  A  F          + +   
Sbjct: 302 DLSRHQEASGKS--LEYFDPETNEHYIPYVIEPSLGCDRVALAFLCEAYDEEHLVDAKGK 359

Query: 368 ST-----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                  +    + P     +        K       L        +    + + G + +
Sbjct: 360 EDVRTVLHLHPFLAPFKCAVLPLSKKLGDKAMEIRNEL-AKDF--MVDYDDAGSIGKRYR 416

Query: 423 YADRRNCPLAIIQ-----GTGERS-RGMLQIKDLAKGKELSREIKNNESWREARVA 472
             D    PL I       G  +      + ++D    +++   I   + +   +VA
Sbjct: 417 RQDEIGTPLCITVDFQTVGDDKVEADNCVTVRDRDTMEQVRLPISELKDYIAKKVA 472


>gi|189462867|ref|ZP_03011652.1| hypothetical protein BACCOP_03567 [Bacteroides coprocola DSM 17136]
 gi|189430483|gb|EDU99467.1| hypothetical protein BACCOP_03567 [Bacteroides coprocola DSM 17136]
          Length = 514

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/266 (8%), Positives = 56/266 (21%), Gaps = 29/266 (10%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+    E    E+   VK     E          +  +  G+  +  +           
Sbjct: 257 QFIFRMREFEQMEMQFFVKPGTELEWFQKWKETRLKWHKALGFGDDHYRYHDHEKLAHYA 316

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGG--------RYDGLVSRFKGQNVPATGFSI 353
                 E ++ F     +                     +Y                   
Sbjct: 317 NAATDIEFLMPFGFKEVEGIHSRTNFDLSQHEKYSGKSIKYFDPEINESYTPYVIETSIG 376

Query: 354 GISRLIVALKSLESSTNNIKEMGPVL-------------ITTMDHDSDSLSKYQMYTQML 400
                +  + +             V+             I  +        K +     L
Sbjct: 377 VDRMFLSIMSAAYHEETLENGETRVVLKLPAALAPVKLAIMPLVKKDGLPEKAREIMDDL 436

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
                          + G + +  D    P  I           + +++    ++    I
Sbjct: 437 ---KFHFHCQYDEKDSIGKRYRRQDAIGTPYCITIDHQTLEDNCVTLRNRDTMEQERVAI 493

Query: 461 KNNESWREARVAQITIPISELVSTVK 486
            +  S    +     + I+ L+ T++
Sbjct: 494 ADLNSIIADK-----VSITSLLKTLQ 514


>gi|115389848|ref|XP_001212429.1| threonyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114194825|gb|EAU36525.1| threonyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 713

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 4/78 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G A       +I N +   +R+ Y   G+  ++TP +   D  + K           +F 
Sbjct: 314 GCAFLLPNGTKIFNALQTLLRSEYRKRGYQEVQTPNM--YDVGIWKTSGHWAHYKDDMFK 371

Query: 73  LQDDDGQWISLRYDLTAP 90
           L D + +  +L+      
Sbjct: 372 L-DVEKREWALKPMNCPG 388



 Score = 37.5 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/129 (10%), Positives = 41/129 (31%), Gaps = 19/129 (14%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 I     +++  M   +D + + Q     LR   +  ++ +  +     +++   
Sbjct: 599 GKWPFWISPRQILIVPVMPAVNDYVEELQTI---LRGDKLNVDIDISGN-TMQKKIRNGQ 654

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                   + G  E+    + I++                    +   + IP+ E    +
Sbjct: 655 LAQYNFIFVVGASEKESRSVNIRNRDD--------------PATQKQGVMIPLEEAREKL 700

Query: 486 KKILQENKE 494
           + +L++ + 
Sbjct: 701 R-VLRKERR 708


>gi|78357681|ref|YP_389130.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123741221|sp|Q30Y11|SYT_DESDG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78220086|gb|ABB39435.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 644

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +  +   L+T  D  ++   + +     L   GIR E+    ++  G +++ A 
Sbjct: 529 GAFPTWLAPVQARLLTVTDAQNEFAEEARA---ALMAQGIRVEVD-TRNEKLGYKVREAQ 584

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
               P  ++ G  E     + ++ L KG 
Sbjct: 585 LEKIPYILVIGDKEVEARGVNVR-LRKGD 612



 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 9/106 (8%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G      K   +R  + D  R  +   G+  ++TP +   +   K     D   + ++ 
Sbjct: 260 SGMVYWHPKGALVRAILEDFERKEHLKRGYQIVQTPQILRRELWEKS-GHYDNYRENMY- 317

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
             D D Q   ++             +         +YR  PV   E
Sbjct: 318 FTDIDEQPYGVKPMN-------CVAHMLIYKSRSHSYRDLPVRLFE 356


>gi|209695239|ref|YP_002263168.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208009191|emb|CAQ79445.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 642

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 72/265 (27%), Gaps = 10/265 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   A +  E    +              +   +        G +E+   +E   
Sbjct: 382 DDAHIFCTEAQVQDEVKSCIEMVYDTYTTFGFENIVVKLSTRPEQRVGSDEMWDKAEADL 441

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYD 335
           +    S  I        G  Y     +        ++   +              G  Y 
Sbjct: 442 QLALESMNIAYEIQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPERLGATYV 498

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G  +      +        + R I  L    +            I  M          Q 
Sbjct: 499 GEDNERHTPVMIHRAILGSLERFIGILIEDYAGFFPTWLAPEQAI-VMGITDKQADYVQE 557

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             + L+  G R +  L  ++  G +++    +  P  ++ G  E   G + ++       
Sbjct: 558 IAKKLQKNGFRVKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGKDL 616

Query: 456 LSREIKNNESWREARVAQITIPISE 480
              +I +  ++ +  V+  T+   E
Sbjct: 617 GKFKIDDFVAFLQQEVSTRTLNTVE 641



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 42/152 (27%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQQEAP-GMVFWHHNGWTIFRELEVFVREKLTEYDYQEVKGPLM-MERVLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +  +++        +   +   +                 +       
Sbjct: 314 AEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     +A++   +   +E V
Sbjct: 373 IMRVRGFTQDDAHIFCTEAQVQDEVKSCIEMV 404


>gi|259507795|ref|ZP_05750695.1| glycine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|59798591|sp|Q8FNG6|SYG_COREF RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|259164588|gb|EEW49142.1| glycine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 461

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/93 (8%), Positives = 27/93 (29%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +    +     +     LR      E    +S   G + +  D    P  +    
Sbjct: 368 VAVLPLSKKPELSGPAEKLAAELRQF-WNVE--YDTSGAIGRRYRRQDEIGTPFCVTVDF 424

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    +++   +   + +   +
Sbjct: 425 DTLEDNAVTVRERDTMEQIRVPLDELQGYLAQQ 457


>gi|325663708|ref|ZP_08152112.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325470201|gb|EGC73434.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 492

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 64/166 (38%), Gaps = 16/166 (9%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD---HDSDS 389
           +Y    ++ +  +  + G +  +   I+ +    S       + PV +  +         
Sbjct: 260 QYTDKENKLQYVHQTSWGMTTRMIGAIIMVHGDNSGLVLPPRIAPVQVMVIPIQQKKDGV 319

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L K     ++L+ AG+  ++   S K+ G +    + R  P+ I  G  +   G   +  
Sbjct: 320 LDKAYEVKEVLKKAGLSVKVD-DSDKSPGWKFSEQEMRGIPVRIELGPKDIEAGHAVVVR 378

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKK-ILQENKE 494
               +++    +  E+            ++E++ T++K +L+  +E
Sbjct: 379 RDTREKIIVPFEELET-----------KVAEVLDTMQKEMLERARE 413


>gi|312132188|ref|YP_003999528.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Leadbetterella
           byssophila DSM 17132]
 gi|311908734|gb|ADQ19175.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Leadbetterella
           byssophila DSM 17132]
          Length = 650

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 53/462 (11%), Positives = 123/462 (26%), Gaps = 84/462 (18%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ + ++      G+ P+ TP +             D+  +  F 
Sbjct: 262 KGLPLWLPKGAMLRERLENFLKRAQLRSGYLPVVTPHIGSKQLYVTS-GHWDKYGEDSFQ 320

Query: 73  LQD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
                ++G+   L+             + +      R+YR  P+   E     R+ Q  +
Sbjct: 321 PIKTPEEGEEFMLKPMNCP-------HHCEIFKSKPRSYRDLPLRLAEFGTVYRYEQSGE 373

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
                                       G  ++D HI   N ++ D   + I     D +
Sbjct: 374 LHG--------------------LTRVRGFTQDDAHIFCANDQVEDEFKKVI-----DLV 408

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
                 L   D   +  L+ ++       +D   D  + A + +   +  +  +    E 
Sbjct: 409 LYVFKSLGFDDYSAQVSLRSLENRSKYIGSDEDWDKAEKA-IVNAAAEKGLKTVVEYGEA 467

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
           + +          A  + +  L  I                S              + ++
Sbjct: 468 AFYGPKLDFMVKDALGRKWQ-LGTIQVDYNLPKRFDLEYVGSDNQKHRPVMIHRAPFGSM 526

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
             F  +  +     F       +   L    K ++            + + L+  +    
Sbjct: 527 ERFIAILLENTAGNFPFWLSPEQIAVLPISEKYEDFAN--------EVFLILQENDIRGY 578

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                                  +  ++ +R                      A+    P
Sbjct: 579 IDHR------------------AEKISRKIRD---------------------AEVAKVP 599

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           L +I G  E+  G + ++   +G   S  ++    + +  + 
Sbjct: 600 LMLIVGEKEQEEGRVSVRKKGEGDLGSFSVQEFIEFAKNEIN 641


>gi|311693962|gb|ADP96835.1| threonyl-tRNA synthetase [marine bacterium HP15]
          Length = 641

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 6/160 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   I   +R   + +G+  I+TP +  S +L +     D+ 
Sbjct: 255 MQEEAP-GMVFWHPDGWSLYQEIEQYMRRKQQEHGYKEIKTPQV-VSRNLWEKSGHWDKF 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGRF 125
              +F+  + +    +++        +   +   +    P R    G   RNE  G    
Sbjct: 313 KDDMFT-TESEKHDYAIKPMNCPCHVQVFNQGLKSYKDLPLRLAEFGSCHRNEASGALHG 371

Query: 126 RQFIQCDV--DNVGSSAETADAEMCMMMADTLEAVGIKRN 163
              ++     D      E A  +      + L  +     
Sbjct: 372 LMRVRGFTQDDAHIFCEEDAIQQEVSSFIEMLHEIYTDFG 411



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/380 (10%), Positives = 97/380 (25%), Gaps = 15/380 (3%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  Y+    +   K     +++        V S      +       D +     +
Sbjct: 266 HPDGWSLYQEIEQYMRRKQQEHGYKEIKT---PQVVSRNLWEKSGHWDKFKDDMFTTESE 322

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
           ++DY I   N      +  +      D                   L G+ + +     D
Sbjct: 323 KHDYAIKPMNCPCHVQVFNQGLKSYKDLPLRLAEFGSCHRNEASGALHGL-MRVRGFTQD 381

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
           ++  F +   +  E    +     I  +    E+   +        G +E+   +E   +
Sbjct: 382 DAHIFCEEDAIQQEVSSFIEMLHEIYTDFGFTEILYKLSTRPEKRVGSDEVWDKAEAALE 441

Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
              N   +        G  Y     +   + I         Q         G        
Sbjct: 442 EALNREGVDWELLPGEGAFYGPKIEFSLKDCIGRVWQCGTIQVDFSMPGRLGAQYVADNS 501

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            R     +           + + ++  E +         V I  +    +     Q   +
Sbjct: 502 ERKTPVMLHRAVLGSFERFIGILIEEYEGAFPTWLAPTQVAILNI--TDNQRDYCQNLAK 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
              + G R    L  ++  G +++       P  ++ G  E     + ++   KG+    
Sbjct: 560 KWDSLGYRVNADL-RNEKIGFKIREHTLNKVPYLVVVGDKEVENNAVAVRT-RKGE---- 613

Query: 459 EIKNNESWREARVAQITIPI 478
           ++         ++ Q  +  
Sbjct: 614 DLGTLSLEAFEQLLQKDVER 633


>gi|229817347|ref|ZP_04447629.1| hypothetical protein BIFANG_02609 [Bifidobacterium angulatum DSM
           20098]
 gi|229785136|gb|EEP21250.1| hypothetical protein BIFANG_02609 [Bifidobacterium angulatum DSM
           20098]
          Length = 491

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 31/102 (30%), Gaps = 2/102 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    D  +  Q     LR       +    +   G + +  D    PL +      
Sbjct: 370 VLPLSKKPDLQNVAQKLAADLRQHEW--MIDYDEAGAIGRRYRREDEIGTPLCVTVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                + I++    ++    +     +   R+ +  + + ++
Sbjct: 428 LDDQAVTIRERDTMQQERVSLDKVADYVAERIGEKRVSVPQM 469


>gi|197122302|ref|YP_002134253.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|238689843|sp|B4UAM8|SYT_ANASK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|196172151|gb|ACG73124.1| threonyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 650

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 10/86 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          + N + D++R +    G+  ++TPLL ++  L +      +  + +F +
Sbjct: 267 GAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVKTPLL-FNKRLWETSGHWGKYRENMFLV 325

Query: 74  QDDDGQ---------WISLRYDLTAP 90
            D +             SL+      
Sbjct: 326 VDSESDPALPLEDRCSFSLKPMNCPS 351



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 2/96 (2%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                 R +  L    +       + PV    +       +  +   + L+  G R E+ 
Sbjct: 528 IYGSFERFVAILVEHYAGAFP-AWLAPVQARVVTVSDRFEAWAREAGEALQARGWRVEVD 586

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
             S K  G +++ A     P  ++ G  E     + 
Sbjct: 587 ASSDK-LGAKIRNAQLAKIPFTLVVGEKEVEAKGVS 621


>gi|118471368|ref|YP_887250.1| threonyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|166225464|sp|A0QWG2|SYT_MYCS2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118172655|gb|ABK73551.1| threonyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 684

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 39/123 (31%), Gaps = 19/123 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +          +     L++ G+R E+     +     + + +    P  +
Sbjct: 569 WLAPVQVVGIPVADAHTPYLEEVAAQLKSRGVRVEVDSSDDRMAKKIVNHTN-MKVPFML 627

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           + G  +   G +  +      +++                  +P  E V  + + + +  
Sbjct: 628 LAGDKDAEAGAVSFR-FGDRTQING-----------------VPRDEAVEMIVRWIADRI 669

Query: 494 EEI 496
            E+
Sbjct: 670 NEV 672


>gi|110770771|ref|XP_001123266.1| PREDICTED: translation initiation factor IF-3-like, partial [Apis
           mellifera]
          Length = 283

 Score = 47.5 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 38/106 (35%), Gaps = 1/106 (0%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV +      +D  +  +    +L+  GIR E+    ++    +++    ++ 
Sbjct: 5   HFPLWLAPVQVVVATIVNDVENYAREVVALLKAQGIRVELD-DRNEKINAKIREHSLQHV 63

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           P+ ++ G  E     L ++ L    +    +        +     T
Sbjct: 64  PVILVIGRKEAEERHLAVRRLGGKSQEIMALNEAMDQLRSLTIVKT 109


>gi|328472989|gb|EGF43837.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 642

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 94/350 (26%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 299 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E    +              +
Sbjct: 359 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    S  I        G  Y     +        
Sbjct: 418 VVKLSTRPEKRVGSDEIWDQSEEALKQSLESMEIPYEIQEGEGAFYGPKIEFTLY---DC 474

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           ++   +              G  Y G  +      +        + R I  L    +   
Sbjct: 475 LDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 534

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +  M+         Q   Q L+ +GIRA+  L  ++  G +++    +  P
Sbjct: 535 PTWLAPEQAVL-MNITDKQSGYVQEIVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVP 592

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  ++ +  ++   + + E
Sbjct: 593 YMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISSRKLNLEE 642



 Score = 37.1 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/152 (7%), Positives = 42/152 (27%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+    Y +  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   +   ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQEEVTSCIKMV 405


>gi|317012082|gb|ADU82690.1| prolyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 577

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 81/276 (29%), Gaps = 16/276 (5%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +++    L          L+ VK L        N+ +  + +    +   ++  F+    
Sbjct: 286 IHKDKETLACFFVRGDDNLEEVKALNALNIIGANALELREASQKDLDNAGLIAGFIGPYG 345

Query: 249 EK---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            K   S     E +K       G NE    +  V   G+ +        +          
Sbjct: 346 LKKHVSYIIFDEDLKEGDCLIAGANEKDFHAVGVDLKGFENLVYADIVQVKESDHCPNCQ 405

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +    K     +      +     + +   +   G  I  SRL+ A+   
Sbjct: 406 GALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKERFFEMGCYGIGI--SRLLSAILEQ 463

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +        T N      V++ +   D           + L   G+ A +    ++ FG 
Sbjct: 464 KSDDLGCVWTKNTAPFDVVIVVSNWKDGAQKKLAFEVYERLLQKGVDALLDDRDAR-FGA 522

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ-IK--DLAK 452
           +++  +     LA+I G         + IK  +L K
Sbjct: 523 KMRDFELIGERLALIIGKQTLENKEFECIKRANLEK 558


>gi|322419731|ref|YP_004198954.1| threonyl-tRNA synthetase [Geobacter sp. M18]
 gi|320126118|gb|ADW13678.1| threonyl-tRNA synthetase [Geobacter sp. M18]
          Length = 636

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV  T +    + +   Q     LR AG+R +     ++  G +++ A  +  P  +
Sbjct: 536 WLAPVQATIVTVTDNQIPYAQAAFDTLRAAGVRVQKDF-RNEKLGFKIREAQLQKIPYML 594

Query: 434 IQGTGERSRG 443
           + G  E   G
Sbjct: 595 VVGDKEVEGG 604


>gi|229494206|ref|ZP_04387969.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229318568|gb|EEN84426.1| threonyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 406

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G          IRN +           G   + TP++   +   +      + +  +F  
Sbjct: 24 GLPLWLPDGAVIRNELEKFAAEQAARSGCRGVYTPVMAKKELYERS-GHWSKFSDDMFPE 82

Query: 74 QDDDGQWISLRY 85
              G+   LR 
Sbjct: 83 MKIGGESFLLRP 94


>gi|220917084|ref|YP_002492388.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254783505|sp|B8J823|SYT_ANAD2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219954938|gb|ACL65322.1| threonyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 650

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 10/86 (11%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          + N + D++R +    G+  ++TPLL ++  L +      +  + +F +
Sbjct: 267 GAPFWLPAGTVLYNVLEDAMRRLVLKNGYQEVKTPLL-FNKRLWETSGHWGKYRENMFLV 325

Query: 74  QDDDGQ---------WISLRYDLTAP 90
            D +             SL+      
Sbjct: 326 VDSESDPALPLEDRCSFSLKPMNCPS 351



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 2/96 (2%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                 R +  L    +       + PV    +       +  +   + L+  G R E+ 
Sbjct: 528 IYGSFERFVAILVEHYAGAFP-AWLAPVQARVVTVSDRFEAWAREAGEALQARGWRVEVD 586

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
             S K  G +++ A     P  ++ G  E     + 
Sbjct: 587 ASSDK-LGAKIRNAQLAKIPFTLVVGEKEVEAKGVS 621


>gi|163868456|ref|YP_001609665.1| threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189083598|sp|A9IVB0|SYT_BART1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|161018112|emb|CAK01670.1| Threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 658

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 47/376 (12%), Positives = 104/376 (27%), Gaps = 17/376 (4%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    R                +D                M   + A 
Sbjct: 268 FWHQKGWKMFQNLINYMRRRLDDHQYAEVNAPQVLDRSLWEISGHWGWYKENMFKAIPAA 327

Query: 159 GIKRNDYHI---GINNRKILDGILEKIGLHGDDKLNERLIVL--RAIDKLDKFGLQGVKL 213
               +++      +N    +      +  + D  +      L  R        GL  V+ 
Sbjct: 328 EDLDHEHIYALKPMNCPGHVQIFKHGLKSYRDLPIRLAEFGLVHRYEPSGSLHGLMRVRS 387

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGF 269
                  D++  F     L +E + I    LS   +    E+   +          +  +
Sbjct: 388 ----FTQDDAHIFCTDEQLAAECLSINDLILSTYADFGFKEISLKLSTRPEKRVGSDALW 443

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
           +    I E V K+       +I ++I+ G   + G  +E  L   +  E Q         
Sbjct: 444 DHAESIMESVLKTIETKFAGQIKTSILPGEGAFYGPKFEYTLKDAIGREWQCGTTQLDFN 503

Query: 330 GGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
              R+         +            G     + +     + +    + P  I      
Sbjct: 504 LPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFAGHMPLWLAPEQIVVATIT 563

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
           S++    Q  T  L+  G+ A   L  ++    +++    +  P+ ++ G  E     + 
Sbjct: 564 SEANEYAQKITARLKAVGLSATTDL-RNEKINYKIREHSLQKVPVILVCGKREAETNSVN 622

Query: 447 IKDLAKGKELSREIKN 462
           ++ L    +    +++
Sbjct: 623 MRRLGSPNQTLLSVED 638


>gi|113955222|ref|YP_731224.1| prolyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123031649|sp|Q0I8J8|SYP_SYNS3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|113882573|gb|ABI47531.1| prolyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 598

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 40/156 (25%), Gaps = 9/156 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         R+  R++  +R      G      P L+ ++   K    +        +
Sbjct: 37  SGIYAYLPLMWRVLQRVMRIVREEMNQIGALETLLPQLQPAELWEKSGRWQGYTAGEGIM 96

Query: 71  FSLQDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPG 123
           F L+D   + + L         +L + L R   +   T+      +R     R       
Sbjct: 97  FHLEDRQERSLGLGPTHEEVITELASDLLRSYRQLPVTLYQIQSKFRDEIRPRFGLMRGR 156

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
            F                    EM        +  G
Sbjct: 157 EFIMKDAYSFHGDEGDLARMYEEMEKAYTRVFQRCG 192



 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     +++     D   ++  +     L  +GI   +     +  G + K AD 
Sbjct: 488 IWPLSIAPFQVIVVVANVQDEVQMALGEEIYNELLASGIDVLLDDRGERA-GVKFKDADL 546

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P  ++ G    + G ++   L K  E    + +   
Sbjct: 547 IGIPWRVVVG-RAAAEGNVE---LVKRSERDANVLSRAE 581


>gi|260591627|ref|ZP_05857085.1| threonine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536427|gb|EEX19044.1| threonine--tRNA ligase [Prevotella veroralis F0319]
          Length = 649

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 42/133 (31%), Gaps = 3/133 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +          +          +R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYARKVKAYFDAHDVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           + M    ++  G +++  + +  P  +I G  E ++G++ ++    G++ +  ++     
Sbjct: 578 SIMD-DRNEKIGRKIRDNELKRVPYMVIVGEKEAAQGLVSMRQQGGGEQATMTMEEFTKR 636

Query: 467 REARVAQITIPIS 479
               VA+    + 
Sbjct: 637 INDEVAEQLKTLD 649


>gi|218282283|ref|ZP_03488582.1| hypothetical protein EUBIFOR_01164 [Eubacterium biforme DSM 3989]
 gi|218216751|gb|EEC90289.1| hypothetical protein EUBIFOR_01164 [Eubacterium biforme DSM 3989]
          Length = 476

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/232 (8%), Positives = 54/232 (23%), Gaps = 5/232 (2%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + +     +  +  L +L           ++   ++     +                  
Sbjct: 249 LDWFEYYCKNCVQFLKDLGINEENIRLRAHDPEELAHYSNGTSDIEYHFSEPIGWGELWG 308

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
                 ++  L       KQ    F           ++    G             +   
Sbjct: 309 IADRTDFD--LKAHQTTSKQNLEYFDQEANEKYIPYVIEPSVGVERLMLAVMCEAYQEEQ 366

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                         + P  +  +        +       L +           +++ G +
Sbjct: 367 LENDSRVVLKLHPALAPYKVAVLPLSKKLSDQGDEVFAKL-SKHFSVT--YDDAQSIGKR 423

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +  D    P  +       + G + I+D    ++    + +  S+ E R+A
Sbjct: 424 YRRQDAIGTPFCVTVDFETANDGCVTIRDRDTMQQERVALDDLVSYIENRIA 475


>gi|60416072|gb|AAH90718.1| Zgc:92586 protein [Danio rerio]
          Length = 359

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/124 (10%), Positives = 36/124 (29%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   +     G+  ++ L     
Sbjct: 234 ERMIAILTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQRVQKEFHKVGLMTDVDLDPGCT 293

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              +++ A        ++ G  E+S   + ++         R + +     +   A  T 
Sbjct: 294 LNKKIRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCMERLKQLKASRTR 353

Query: 477 PISE 480
              E
Sbjct: 354 NAEE 357


>gi|182420049|ref|ZP_02951283.1| glycyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669522|ref|ZP_04529502.1| glycine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376086|gb|EDT73673.1| glycyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237654966|gb|EEP52526.1| glycine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 463

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/269 (11%), Positives = 62/269 (23%), Gaps = 34/269 (12%)

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
             +L+ F   G  L   +   D   +F    N+  E + +         E+ +       
Sbjct: 224 QMELEFFCKPGTDLEWHKYWKDYCWNFLLNLNVKPENLRMRD-----HGEEELSFYSNAT 278

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
                            E +   G+         T     ++      +        NEK
Sbjct: 279 SDI--------------EYLFPFGWGELWGIADRTDYDLNKHQEHSGQDLSYLDQTTNEK 324

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
             P V     G  R                G                   +    + P  
Sbjct: 325 YIPYVIEPSLGADRVALAFLIEAYDEEELEGGDSRTVM------------HLHPALAPFK 372

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
              +        +       L +      +    + + G + +  D    P  I      
Sbjct: 373 AAILPLSKKLSERALEVYADL-SKKFN--LDFDETGSIGKRYRRQDEIGTPYCITIDFET 429

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWRE 468
                + I++    ++   +I   ES+ +
Sbjct: 430 LEDEAVTIRNRDTMEQERIKISELESYIQ 458


>gi|110004597|emb|CAK98934.1| probable threonyl-trna synthetase 1 protein [Spiroplasma citri]
          Length = 638

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + ++  + + IR     Y F  ++TP++  S+   K     D   + +F+ 
Sbjct: 258 GLPIWLPNGMALKKVLQEYIREKEWEYDFTEVDTPVIGTSEMY-KISGHWDHYQENMFAP 316

Query: 74  QDDDGQWISLRY 85
              + +   LR 
Sbjct: 317 MAQNNEISVLRP 328



 Score = 43.7 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 33/368 (8%), Positives = 93/368 (25%), Gaps = 38/368 (10%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRF----RQFIQCDVDNVGSSAETADAEMCMMMAD 153
           N   +    + Y     +  +            +  +                       
Sbjct: 265 NGMALKKVLQEYIREKEWEYDFTEVDTPVIGTSEMYKISGHWDHYQENMFAPMAQNNEIS 324

Query: 154 TLEAVGIKRNDYHIGINNRKILD--------GILEKIGLHGDDKLNERLIVLRAIDKLDK 205
            L  +    +        R   +         IL +    G     ER+ +++  D    
Sbjct: 325 VLRPMACPHHIAVYNYKQRSYRELPLRIAEHAILHRYETSGSLTGLERVRMMQLTDSHIF 384

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
                +K                           +++ +  DL+ ++      ++     
Sbjct: 385 LRHDQLKEEFKRCF-------------------KLINEVLTDLKITVDYYSLSLRDPANK 425

Query: 266 EKGFNE--LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL---GFPVMNEKQ 320
           EK +++  +   +E + +   +  +I     I     Y      +          ++  Q
Sbjct: 426 EKYYDDNQMWNHAEQMLQEALDDLKIPYVPMIGEAAFYGPKLDIQIKTALNHEITVSTLQ 485

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
              +          D   ++     +           + + L+  +           ++I
Sbjct: 486 FDFLLPKKFNLSYIDETGAKAMPVMLHRGLIGTYERFIAILLEQTKGVLPFWLAPKQIVI 545

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++ +   L       Q  +   +R  +     +    +++ A     P  I+ G  ER
Sbjct: 546 IPVN-NEHHLEYVNELHQQFKKLKLRTTIDDRDER-LSYKIREAQVAKIPYQIVIGDQER 603

Query: 441 SRGMLQIK 448
            + M+  +
Sbjct: 604 DKKMITYR 611


>gi|71894465|ref|YP_278573.1| glycyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|123747937|sp|Q4A5V9|SYG_MYCS5 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|71851253|gb|AAZ43862.1| glycyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 451

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/95 (10%), Positives = 25/95 (26%), Gaps = 2/95 (2%)

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
           K++ P  +  +        K       L    I        S + G + +  D       
Sbjct: 359 KKLSPYKVAILPLIKKFNPKANEIYSYLIDKNISVTFD--ESASIGKRYRRQDAIGTYYC 416

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           +           + ++D    ++     K+   + 
Sbjct: 417 LTVDEQSLEDNTVTLRDRDSMQQERINFKDILKFL 451


>gi|28898054|ref|NP_797659.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362413|ref|ZP_05775365.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260878403|ref|ZP_05890758.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|31340445|sp|Q87Q70|SYT_VIBPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28806268|dbj|BAC59543.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308091059|gb|EFO40754.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308115583|gb|EFO53123.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 642

 Score = 47.5 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 94/350 (26%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 299 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E    +              +
Sbjct: 359 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    S  I        G  Y     +        
Sbjct: 418 VVKLSTRPEKRVGSDEIWDQSEEALKQSLESMEIPYEIQEGEGAFYGPKIEFTLY---DC 474

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           ++   +              G  Y G  +      +        + R I  L    +   
Sbjct: 475 LDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 534

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +  M+         Q   Q L+ +GIRA+  L  ++  G +++    +  P
Sbjct: 535 PTWLAPEQAVL-MNITDKQSGYVQEIVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVP 592

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  ++ +  ++   + + E
Sbjct: 593 YMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISSRKLNLEE 642



 Score = 37.1 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/152 (7%), Positives = 42/152 (27%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+    Y +  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   +   ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQEEVTSCIKMV 405


>gi|294636227|ref|ZP_06714641.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090484|gb|EFE23045.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 622

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 88/339 (25%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 277 FMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 336

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 337 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSTFGFEK 395

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N I        G  Y     +       
Sbjct: 396 IVVKLSTRPEKRIGSDEIWDRAEEDLAAALEENGIPFEYQPGEGAFYGPKIEFTLHDCLD 455

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 456 RAWQCG-TVQLDFSLPGRLNASYVGENNERVVPVMIHRAILGSMERFIGILTEEFAGFFP 514

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+         +   + L+ AGIRA+  L  ++  G +++    R  P  
Sbjct: 515 TWLAPVQAVVMNITDSQAEYVEELNKKLQAAGIRAKSDL-RNEKIGFKIREHTLRRVPYM 573

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++           I +        +
Sbjct: 574 LVCGDKEVEAGKVAVRTRRGKDLGVMSIDDVIEKLLQEI 612



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 51/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 236 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKAYQYQEVKGP-FMMDRVLWEKTGHWENY 293

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++        +   +   +                 +       
Sbjct: 294 KDAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 352

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             + +    + I+ K+    
Sbjct: 353 LMRVRGFTQDDAHIFCTEEQIRDEVNSCI--------KMVYDMYSTFGFEKIVVKLSTRP 404

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    I  RA + L     +
Sbjct: 405 EKRIGSDEIWDRAEEDLAAALEE 427


>gi|289425072|ref|ZP_06426849.1| glycine--tRNA ligase [Propionibacterium acnes SK187]
 gi|295130509|ref|YP_003581172.1| glycine--tRNA ligase [Propionibacterium acnes SK137]
 gi|289154050|gb|EFD02738.1| glycine--tRNA ligase [Propionibacterium acnes SK187]
 gi|291377378|gb|ADE01233.1| glycine--tRNA ligase [Propionibacterium acnes SK137]
          Length = 481

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +SD   K +     LR      +     ++  G + +  D    P  I      
Sbjct: 390 VLPLSRNSDLSPKARDLAARLREH-WNVDFD--DAQAIGKRYRRQDEIGTPFCITVDFDS 446

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++     +    I   E +   +
Sbjct: 447 LEDDAVTIRERDTMAQQRVSIDKVEEYLGGK 477


>gi|318041155|ref|ZP_07973111.1| prolyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 609

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 2/75 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         R+  +I   +R      G      P L+ ++   +             +
Sbjct: 37  SGIYAYLPLLWRVLQKISAIVREELNAAGALETLLPQLQPAELWQRSGRWAGYTAGEGIM 96

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G+ + L  
Sbjct: 97  FHLEDRQGRELGLGP 111



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 35/103 (33%), Gaps = 2/103 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I     +++     D+      +      + AG+   +   + +  G + K AD  
Sbjct: 498 WPTAIAPFEVIVVIANVADAAQRELGEQLYAEFQVAGMDVLLDDRTERA-GVKFKDADLL 556

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             P  ++ G    + G +++   A G+       +  +  + +
Sbjct: 557 GIPWRVVVG-RGAADGKVELVQRAGGERSDLAAADVLAQLQGQ 598


>gi|260575744|ref|ZP_05843741.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259022142|gb|EEW25441.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 648

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 69/263 (26%), Gaps = 18/263 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         ++   + D +R      G+  I TP +     L +     +   + +F +
Sbjct: 266 GMVFWHPNGWQVWRTLEDYMRRRQREAGYREIRTPQVVDR-VLWERSGHWEAYRENMFIV 324

Query: 74  Q-DDDG----QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           + D++G    +  +L+             +        ++YR  P+   E     R+   
Sbjct: 325 EVDEEGAKEKRINALKPMNCP-------CHVQVYNQGLKSYRDLPLRLAEFGACHRYESS 377

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
                          DA +    A                 ++        E   +    
Sbjct: 378 GSMHGLMRVRGFTQDDAHIFCTEAQIESECAAFIELLSSVYHDLG-----FESFDIKLST 432

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +   R+      D+++      +K +      D       G  L  +  D +        
Sbjct: 433 RPEVRIGTDEDWDRVETALENAIKKVGRSYVIDPGEGAFYGPKLDFKLTDAIGRQWQCGT 492

Query: 249 EKSMHELYELVKGTIAGEKGFNE 271
            +    L   +     GE G   
Sbjct: 493 FQVDPNLPSRLGAEYIGEDGARH 515



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 89/329 (27%), Gaps = 28/329 (8%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD--KLNE 192
              S    A  E   ++    E    KR +    +N    +    + +  + D   +L E
Sbjct: 308 WERSGHWEAYRENMFIVEVDEEGAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAE 367

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                R        GL  V+        D++  F   A + SE    +    S+  +   
Sbjct: 368 FGACHRYESSGSMHGLMRVRG----FTQDDAHIFCTEAQIESECAAFIELLSSVYHDLGF 423

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                 +        G +E     E   ++               G  Y     ++    
Sbjct: 424 ESFDIKLSTRPEVRIGTDEDWDRVETALENAIKKVGRSYVIDPGEGAFYGPKLDFKLTDA 483

Query: 313 FPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                +           S  G        +R +   +           L + +++     
Sbjct: 484 IGRQWQCGTFQVDPNLPSRLGAEYIGEDGARHRPFMLHRAILGSFERFLGILIENYAGKL 543

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQL 421
                   V++  +  D+D+          LR AG+RAE  + + K        + G   
Sbjct: 544 PFWLAPRQVVVAGIVSDADAYVH--EVVAELRKAGVRAEADVRNEKINYKVREHSVGK-- 599

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                   P+ +  G  E     + ++ L
Sbjct: 600 -------VPVILAIGMKEVEERSVSVRRL 621


>gi|240145042|ref|ZP_04743643.1| glycine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257202867|gb|EEV01152.1| glycine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291535367|emb|CBL08479.1| glycyl-tRNA synthetase, dimeric type [Roseburia intestinalis M50/1]
 gi|291538177|emb|CBL11288.1| glycyl-tRNA synthetase, dimeric type [Roseburia intestinalis XB6B4]
          Length = 465

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 33/103 (32%), Gaps = 3/103 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV I  +          +     L +     E       N G + +  D    
Sbjct: 365 HFHPALAPVKIGVLPLSKKLNEGAEKVFAQL-SHKYNCEFD--DRGNIGKRYRRQDEIGT 421

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P  +       + G + ++D    ++   +I++ +++   +  
Sbjct: 422 PFCVTYDFESENDGAVTVRDRDTMEQERIKIEDLDAYFAEKFN 464


>gi|160915037|ref|ZP_02077250.1| hypothetical protein EUBDOL_01045 [Eubacterium dolichum DSM 3991]
 gi|158432836|gb|EDP11125.1| hypothetical protein EUBDOL_01045 [Eubacterium dolichum DSM 3991]
          Length = 461

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/142 (9%), Positives = 37/142 (26%), Gaps = 4/142 (2%)

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM-GPVLITTMDHDSDSL 390
            +Y                  +  +     L++      +      P+    M       
Sbjct: 322 EKYIPYCIEPSVGVERMLLAVMCDAYDEEQLENDTRIVMHFHPYLAPIKACVMPLSKKLG 381

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
            K       +      A      + + G + +  D    P  +       + G + ++  
Sbjct: 382 DKAMEVYGKI---AHVANCDYDDAGSIGKRYRRQDAIGTPFCVTIDFETENDGCVTVRHR 438

Query: 451 AKGKELSREIKNNESWREARVA 472
              ++    I++  S+ E R+ 
Sbjct: 439 DSMEQERVAIEDLASYIEERIK 460


>gi|288801299|ref|ZP_06406753.1| glycine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331682|gb|EFC70166.1| glycine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 513

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/239 (10%), Positives = 59/239 (24%), Gaps = 30/239 (12%)

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP----VMNEKQKPVV 324
           + EL +        G  + R      +       T   ++   GF     V +     + 
Sbjct: 285 WKELRMKWHQALGFGAENYRFHDHEKLAHYANAATDVEFKMPFGFKEVEGVHSRTNFDLS 344

Query: 325 FGSVGGGGRYDGLVSRFKGQNVP-----------ATGFSIGISRLIVALKSLE----SST 369
                 G        +     VP                +  +    AL++ E       
Sbjct: 345 QHEKFSGKSIKYFDPQTNESYVPYVIETSIGVDRMFLSIMCHAYTEEALENGETRVVLKL 404

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                   + +  +        K +     L               + G + +  D    
Sbjct: 405 PAALAPVKLCVMPLVKKDGLPEKAREIVDSL---KFHFNCHYEEKDSIGKRYRRHDAIGT 461

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           P  +           + ++     ++   +I    +  E +V+        +VS +KK+
Sbjct: 462 PYCVTVDHDTLKDNKVTLRFRDTMEQERVDISELRNIIEDKVS--------IVSLLKKL 512


>gi|297697604|ref|XP_002825941.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Pongo abelii]
          Length = 707

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/148 (10%), Positives = 40/148 (27%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 558 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 617

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               +      G  A++ L  +     +++ A        ++ G  E+    + ++    
Sbjct: 618 ALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTRDN 677

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  + +     +      T+   E
Sbjct: 678 KIHGEILVTSAIDKLKNLKKTRTLNAEE 705



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 329 FLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 387

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 388 D-TFALKPMNCPGHCLMFAHR 407


>gi|21672408|ref|NP_660475.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|22654285|sp|P46244|SYT_BUCAP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|21623017|gb|AAM67686.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 642

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 75/313 (23%), Gaps = 13/313 (4%)

Query: 142 TADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAID 201
              +       D +     +  +Y I   N      I         D             
Sbjct: 304 WQKSGHWDNYQDAIFTTSSENREYCIKPMNCPGHVQIFNCGLKSYRDLPIRMAEFGSCHR 363

Query: 202 KLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKG 261
                 L G+ + +     D++  F     L  E  + +     +    +  ++      
Sbjct: 364 NESSGSLHGL-MRIRNFTQDDAHIFCTQEQLRYEINNCIKMIYDLYSTFNFKKILVKFST 422

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
                 G   +   +E         N +K       G  Y     +   +    ++   +
Sbjct: 423 RPKKRIGDESVWDQAEKDLSDVLIENNLKFEHQEGEGAFYGPKIEF---VLQDSLDRNWQ 479

Query: 322 PVVFGSVGG-----GGRY-DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
                            Y D    +     +           + + ++            
Sbjct: 480 CGTIQLDFYLPIRLRSFYIDEHNHQKIPIIIHRAILGSIERFIGILIEEFSGKLPTWLSP 539

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
             + +  +      ++  +   Q      IR E  L  ++  G +++    R  P  +I 
Sbjct: 540 --IQVVILSITDSHINYVKKIVQHFSDINIRVESDL-RNEKIGFKIREHTLRQIPYILIC 596

Query: 436 GTGERSRGMLQIK 448
           G  E     + ++
Sbjct: 597 GEKEIKSKKISVR 609



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 57/207 (27%), Gaps = 11/207 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I N +   +R   + Y +  ++TPLL       K     D  
Sbjct: 256 MQKESP-GMIFWHNNGWIIFNELEIFVREKLKEYKYKEVKTPLLIDKSIWQKS-GHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +   ++             +        ++YR  P+   E  G     
Sbjct: 314 QDAIFT-TSSENREYCIKPMNCPG-------HVQIFNCGLKSYRDLPIRMAEF-GSCHRN 364

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
           +        +     T D        + L             + +      IL K     
Sbjct: 365 ESSGSLHGLMRIRNFTQDDAHIFCTQEQLRYEINNCIKMIYDLYSTFNFKKILVKFSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKL 213
             ++ +  +  +A   L    ++    
Sbjct: 425 KKRIGDESVWDQAEKDLSDVLIENNLK 451


>gi|71021529|ref|XP_760995.1| hypothetical protein UM04848.1 [Ustilago maydis 521]
 gi|46100879|gb|EAK86112.1| hypothetical protein UM04848.1 [Ustilago maydis 521]
          Length = 759

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 43/129 (33%), Gaps = 5/129 (3%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
              +G     +A+ +   +      + P  +  +   +      +   Q L   G  A++
Sbjct: 625 RAVVGSLERFIAILTEHFAGKWPFWLSPRQLLVVPVTNTVFDYAKSVQQRLWDQGFFADV 684

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL----AKGKELSREIKNNES 465
            L  +     +++  +        + G  E     + I++      KGK  + ++    +
Sbjct: 685 DLSDN-TLPKKIRNGEIAQYNFVFVVGHEEMQTNSVNIRNRDDVNQKGKAETMDLDKTIT 743

Query: 466 WREARVAQI 474
             +A  +Q 
Sbjct: 744 LLKALKSQR 752



 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 4/82 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL-QDD 76
                 RI N + + +++ Y   GFD + TP + Y+  L +           +F L  D 
Sbjct: 374 WLPHGARIYNTLQEFLKSEYRQRGFDEVVTPNM-YNSKLWQTSGHWQNYKDDMFVLGVDK 432

Query: 77  DGQWISLRYDLTAPLARYVAEN 98
             +  +L+           A  
Sbjct: 433 --EQFALKPMNCPGHCLMFASR 452


>gi|320536876|ref|ZP_08036869.1| threonyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146259|gb|EFW37882.1| threonyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 583

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 79/281 (28%), Gaps = 31/281 (11%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK--GFNELVVISEL 278
           D++  F   A ++SE         ++  +    E   LVK +   EK  G +     +E 
Sbjct: 322 DDAHIFCTEAQISSEVKKFCALLKNMYADFGFAEDSILVKFSTRPEKRVGDDATWDRAEK 381

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
                     ++       G  Y     +  I     +  + +             + L 
Sbjct: 382 ALADACKDAGLEYEVAEGEGAFYGPKLEFTLI---DSLGREWQCGTIQVDYQLPSKERLN 438

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI------TTMDHDSDSLSK 392
           + + G++       +     + +L+                         +         
Sbjct: 439 AEYIGEDNQKHNPVMLHRAALGSLERFIGILIEHYAGAFPPWLSPLQAVVIPVAPTFNDY 498

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   + L   G+R +  + + +    +++    +  P  +I G  E + G L ++    
Sbjct: 499 AEKTAKDLAAQGLRVKADIDTDR-MNAKIRKYQEQRIPYQLIVGEKEAANGSLAVR---- 553

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                               Q T+     V+ +K+ +  + 
Sbjct: 554 ---------------IHHGDQKTMTTEAFVNFIKEKIATHA 579


>gi|218260218|ref|ZP_03475604.1| hypothetical protein PRABACTJOHN_01265 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224670|gb|EEC97320.1| hypothetical protein PRABACTJOHN_01265 [Parabacteroides johnsonii
           DSM 18315]
          Length = 526

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 22/174 (12%)

Query: 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGP 377
            K   V F    G   Y    S      +             + L               
Sbjct: 285 GKAFDVTFIDKNGKNEYAWATSWGVSTRLIGALIMSHSDDNGLVL-------PPHLAPIQ 337

Query: 378 VLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           V+I  +   ++ L++           L+  GI  +     +K  G +    + +  P+ +
Sbjct: 338 VVIIPIYRSAEQLAQISEKVNGIVAKLKALGISVKFDDADNKKPGWKFAEYELKGVPVRL 397

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             G  +     +++      ++ +    N E++ +            L+  ++K
Sbjct: 398 AMGGRDLENNTIEVMRRDTLEKETVTCDNIETYVQ-----------NLLEEIQK 440


>gi|254466098|ref|ZP_05079509.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206687006|gb|EDZ47488.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 648

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 83/270 (30%), Gaps = 29/270 (10%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +     I  +    +             G +E+   SE   
Sbjct: 392 DDAHIFCAEDQIEAETKKFIDFLSEIYKDLGFEKFSVKFSDRPEKRSGSDEVWDKSEAAL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS- 339
           K+   +           G  Y      E +L   +  + Q   +        R D     
Sbjct: 452 KAATEAAGCAYDLNPGEGAFYG--PKLEFVLTDAIGRDWQCGTLQVDFVLPERLDATYIG 509

Query: 340 ----RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
               + +   +           + + ++              V++ ++  D+D  +  Q 
Sbjct: 510 ADGAKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSDAD--AYVQE 567

Query: 396 YTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
               L+ AG+RAE  + + K        + G           P+ +  G  E     + +
Sbjct: 568 VVAELKKAGVRAEADIRNEKINYKVREHSVGK---------VPVILAVGHREVEERTVSV 618

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIP 477
           + L    E   ++++ E+  +A  A+ T P
Sbjct: 619 RRLG---EKETKVESLENVTKALAAEATPP 645


>gi|15228692|ref|NP_191771.1| tRNA synthetase class II (G, H, P and S) family protein
           [Arabidopsis thaliana]
 gi|30695549|ref|NP_850736.1| tRNA synthetase class II (G, H, P and S) family protein
           [Arabidopsis thaliana]
 gi|6899922|emb|CAB71872.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis
           thaliana]
 gi|16648885|gb|AAL24294.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis
           thaliana]
 gi|22136084|gb|AAM91120.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis
           thaliana]
 gi|332646791|gb|AEE80312.1| prolyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332646792|gb|AEE80313.1| prolyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 530

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS----LSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                          V++  + +   +              L  AGIRAE  L  + + G
Sbjct: 320 DDKGLVLPPKVASVQVVVIPVPYKDANTQGIYDACTATASALCEAGIRAEEDLRDNYSPG 379

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +    + +  PL I  G  +     ++                  + R     +  IP 
Sbjct: 380 WKYSDWEMKGVPLRIEIGPRDLENDQVR------------------TVRRDNGVKEDIPR 421

Query: 479 SELVSTVKKILQENKEEI 496
             LV  VK++L++ ++ +
Sbjct: 422 GSLVEHVKELLEKIQQNM 439


>gi|116620962|ref|YP_823118.1| prolyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|122255000|sp|Q027I0|SYP_SOLUE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116224124|gb|ABJ82833.1| prolyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 480

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 44/147 (29%), Gaps = 15/147 (10%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                           +I  +    +  +        +    I A++     ++ G +  
Sbjct: 275 DDKGLVLPPKLAPVKSVIVPIYRKEEERAAVLEAAHRI-AKEIGAKVDDREGQSPGAKFF 333

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKG-----KELSREIKNNESWREARVAQITIP 477
           + +RR  P+ +  G  + + G + +K    G      +     K   +  + +    T  
Sbjct: 334 HWERRGVPVVLELGPRDLASGKIVLKRRDTGTKEPIDQSEVGAKVAAALEDMQKGLYTRA 393

Query: 478 ISEL---------VSTVKKILQENKEE 495
              +         +  V+ IL++   E
Sbjct: 394 KDRMKANTVLANSIEEVEAILKDATAE 420


>gi|300788441|ref|YP_003768732.1| glycyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299797955|gb|ADJ48330.1| glycyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 462

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/227 (10%), Positives = 57/227 (25%), Gaps = 12/227 (5%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           +  D  +      E +    A      E        ++ G        +   +     ++
Sbjct: 244 IKADNLRHYEHPKEKL-SHYAKRTVDIEYRFAFNAGQEWGELEGIANRTDFDLTTHSNHS 302

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           G              +   +   +  G      LV  +  + VP          ++    
Sbjct: 303 GQDLSFFDQASGQRYRPFVIEPAAGVGRSMMAFLVDSYVEEEVPNAKGGTDTRVVLRL-- 360

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                 +       V +  +  ++D   K +     LR      +     ++  G + + 
Sbjct: 361 ------DPRLSPFKVAVLPLSRNADLTPKAKEVAATLRKH-WNVDFD--DAQAIGRRYRR 411

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            D    P  +           + +++     +    I   ES+   R
Sbjct: 412 QDEIGTPYCVTVDFDSLEDQAVTVRERDSMSQERIAIDKLESYLAGR 458


>gi|260901781|ref|ZP_05910176.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308108104|gb|EFO45644.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 386

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 94/350 (26%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 43  MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 102

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E    +              +
Sbjct: 103 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNI 161

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    S  I        G  Y     +        
Sbjct: 162 VVKLSTRPEKRVGSDEIWDQSEEALKQSLESMEIPYEIQEGEGAFYGPKIEFTLY---DC 218

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           ++   +              G  Y G  +      +        + R I  L    +   
Sbjct: 219 LDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 278

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +  M+         Q   Q L+ +GIRA+  L  ++  G +++    +  P
Sbjct: 279 PTWLAPEQAVL-MNITDKQSGYVQEIVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVP 336

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  ++ +  ++   + + E
Sbjct: 337 YMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISSRKLNLEE 386



 Score = 37.1 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/152 (7%), Positives = 42/152 (27%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+    Y +  ++ PL+     L +     D+ 
Sbjct: 1   MQQEAP-GMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDR-VLWERSGHWDKY 58

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 59  ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 117

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   +   ++ V
Sbjct: 118 IMRVRGFTQDDAHIFCTESQIQEEVTSCIKMV 149


>gi|266622323|ref|ZP_06115258.1| glycine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288865966|gb|EFC98264.1| glycine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 200

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 30/102 (29%), Gaps = 3/102 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV I  +          +     L +     E       N G + +  D    
Sbjct: 100 HFHPAIAPVKIGVLPLSKKLNEGAEKIYTEL-SRYYNCEFD--DRGNIGKRYRRQDEIGT 156

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           P  +           + ++D    +++   I   +++ E + 
Sbjct: 157 PFCVTYDFDSEEDHAVTVRDRDTMEQVRVPIAELKNYFEDKF 198


>gi|322786154|gb|EFZ12760.1| hypothetical protein SINV_13030 [Solenopsis invicta]
          Length = 347

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/257 (12%), Positives = 70/257 (27%), Gaps = 10/257 (3%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M     ++     G        +RI N++++ +     + G + I  P L  S +L K  
Sbjct: 19  MINYGIIKPVSI-GMYALLPLGMRILNKLINLVDKEMTSIGAEKILLPAL-TSVALWKKT 76

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY-------DLTAPLARYVAENF-DTIVFPCRTYRIG 112
              D     +F+L D   +   L         DL +   ++ A++    +      +R  
Sbjct: 77  DRYDCNKTELFTLMDRHKKEYILSPTHEEAICDLISSAGQFSAKSLPLKLYQISSKWRDE 136

Query: 113 PVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
              R        F        D    +A      +C    +    +G++       +   
Sbjct: 137 MKPRLGLLRSREFIMKDLYTFDTSLDNARYTYNLVCESYNNIFRKIGVEYTKSIGDMGTI 196

Query: 173 KILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL 232
             L         +  +    R  +                    E     + +      L
Sbjct: 197 GGLMSHEYHYISNIGEDTILRCRLCHFSINQSISKTTSCPECKNELHQHTAAEVGHTFLL 256

Query: 233 TSEQIDIMVSFLSIDLE 249
            ++    + +    + +
Sbjct: 257 DTKYSQPLKALYVEENK 273


>gi|281357583|ref|ZP_06244070.1| prolyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281315840|gb|EFA99866.1| prolyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 575

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 35/129 (27%), Gaps = 2/129 (1%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY- 393
           DG                   + +  +                V +  ++ D   + +  
Sbjct: 431 DGKSHPMIMGCYGIGVGRAMAAVIEQSCDEYGPIWPMSIAPYQVELCAINPDKAGVGEAC 490

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           +     L  AGI   ++    +  G+    AD    PL ++      +   ++ K     
Sbjct: 491 EKLYADLTAAGIEV-LYDDRGEKAGSMFSDADLIGIPLRLVVSPKTLADNAVEFKVRGSR 549

Query: 454 KELSREIKN 462
                EI +
Sbjct: 550 DAEKLEISS 558



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/148 (10%), Positives = 37/148 (25%), Gaps = 4/148 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI  +I   IR          +  P++  +D L K     +     +   
Sbjct: 36  GIYSLLPLGKRIVEKIEAIIREEMNRIEGQEVLMPVVLPAD-LWKESGRYESVGAELLRF 94

Query: 74  QDDDGQWISL---RYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           +D + + + L     +    L R    ++  +       +                +   
Sbjct: 95  RDRNDKPMILAMTHEEGIVHLVRTELNSYKQLPVMLYQIQTKYRDEARPRAGLIRVREFT 154

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAV 158
                   + +    +      +  E +
Sbjct: 155 MKDAYSFHTDQADLEKYYYRCHEAYERI 182


>gi|223985700|ref|ZP_03635747.1| hypothetical protein HOLDEFILI_03053 [Holdemania filiformis DSM
           12042]
 gi|223962311|gb|EEF66776.1| hypothetical protein HOLDEFILI_03053 [Holdemania filiformis DSM
           12042]
          Length = 458

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/224 (7%), Positives = 49/224 (21%), Gaps = 9/224 (4%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +         +       +             K G +                     Y
Sbjct: 238 WKNFCMNWLTNLGLNAESLRFREHTPEELAFYSK-GTSDIEYLFPFGWGELWGIADRTDY 296

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE- 366
           +         E  + +   +     +Y                  +  +     L   + 
Sbjct: 297 DLKTHQEHSGESLEYLDPQT---NEKYLPYCVEPAVGVERLMLAFLCDAYDEEVLNEKDT 353

Query: 367 -SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               +    + PV    +       +  +     L  +    E     + + G + +  D
Sbjct: 354 RVVLHLHPALAPVKACILPLSKQLSASAKEIYAQLADS-FVCE--YDEAGSIGKRYRRQD 410

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               P  +         G + +++    +++   I   ++  EA
Sbjct: 411 AIGTPFCVTIDFDTEKDGCVTVRERDSMEQVRLPISELQAHIEA 454


>gi|189190276|ref|XP_001931477.1| glycyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187973083|gb|EDU40582.1| glycyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 657

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 6/116 (5%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VLI  +  + D     +     LR  GI   +   S  + G   +YA  D    PL 
Sbjct: 540 PTKVLIVPLSSNPDFEPFVRKLKDKLRRLGISNRVD-ASGASIGK--RYARNDELGTPLG 596

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           I             ++D    +++   +          V       S++ + + K 
Sbjct: 597 ITIDFQSIKDNTFTLRDRDTTEQVRSSLDEIAKAIANIVKGEE-KWSDVAARLPKF 651


>gi|88608148|ref|YP_506185.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|123763729|sp|Q2GEB1|SYT_NEOSM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|88600317|gb|ABD45785.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 637

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/359 (11%), Positives = 89/359 (24%), Gaps = 11/359 (3%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F           +    RN+    G          +          ++    M       
Sbjct: 267 FWHENGFILYRVLENYIRNKLKTHGYREVKTPLVYNKCLWERSGHWSKFKENMFVIRSDD 326

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
           G           + ++    L+        +L E  +  R        GL  V+      
Sbjct: 327 GEFSLKPMNCPAHIEVYKQSLKSY-RDLPLRLAEFGMCHRNEASGALHGLMRVRG----F 381

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     +  E I        +  +    E+            G +E    +E+
Sbjct: 382 VQDDAHIFCTPQQICDETIAFCGLLKEVYRDLGFTEVEVRFSDRPEVRLGNDETWDKAEI 441

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYD 335
             KS  +   +  +     G  Y     +  +       +        V          D
Sbjct: 442 ALKSAMDKAGLIYTLNPGEGAFYGPKIEFVLVDALKRKWQCGTLQVDFVLPERLDATYID 501

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
               +     +           L + ++  +           V + T+    +     + 
Sbjct: 502 HEGKKQHPVMLHRAILGTFERFLGILIEHYDGKFPLWLAPTQVAVLTITEKVE--EYAKS 559

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
               L   GIRA     + +    +++Y   R  P+  I G  E     + ++ +   +
Sbjct: 560 LLNHLSKTGIRAVSDFSNQR-IDYKIRYHTTRRVPILWIIGRIEEKSNSVTVRRMGSSE 617



 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 3/102 (2%)

Query: 24  RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL 83
            +   + + IRN  + +G+  ++TPL+ Y+  L +      +  + +F ++ DDG+  SL
Sbjct: 274 ILYRVLENYIRNKLKTHGYREVKTPLV-YNKCLWERSGHWSKFKENMFVIRSDDGE-FSL 331

Query: 84  RYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
           +            ++  +    P R    G   RNE  G   
Sbjct: 332 KPMNCPAHIEVYKQSLKSYRDLPLRLAEFGMCHRNEASGALH 373


>gi|307717987|ref|YP_003873519.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531712|gb|ADN01246.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 577

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/153 (9%), Positives = 33/153 (21%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++   I    +  G   +  PL+   +   +    +      +   
Sbjct: 50  GLYSFLPLGLRVFYKLKRLIAGEMKRLGGQEVLAPLVNPMELWERS-GRDLLVGGDLVKF 108

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            D  G+ + +         +L     R        +      YR     R        F 
Sbjct: 109 SDRAGRQMVISPTHEEAMVELLRQSMRSYRMLPVFLYQFQTKYRDEERVRIGLLRSREFI 168

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      +       ++            
Sbjct: 169 MKDGYSFHRTYADLNNFFPKVFHAYERVFRTCN 201



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 32/112 (28%), Gaps = 4/112 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V + ++ +      K +   + L    +  +  L   + F     
Sbjct: 467 DEHGIVWPPQVAPFMVFLMSIGNSLSMKRKVEALAEALGDRALLDDRHLSPGRKFL---- 522

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            AD    P  I+        G +++K+ + GK      +  E +      Q 
Sbjct: 523 DADLLGIPYRILLTQELLEEGKVEVKERSTGKVWKLAYQRVEDFVHYLEEQY 574


>gi|297297312|ref|XP_001086926.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic-like
           [Macaca mulatta]
          Length = 708

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/116 (11%), Positives = 34/116 (29%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 559 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 618

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +      G  A++ L  +     +++ A        ++ G  E+    + ++
Sbjct: 619 ALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKINNAVNVR 674



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 356 FLPRGAFIYNTLMDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 414

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 415 D-TFALKPMNCPGHCLMFAHR 434


>gi|256371437|ref|YP_003109261.1| prolyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008021|gb|ACU53588.1| prolyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 572

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 40/109 (36%), Gaps = 1/109 (0%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
             +         V +       D  +      + L   G R  +      +FG   +  +
Sbjct: 460 GLAWPLEIAPFQVAVVPAGSSDDVAATAANIAEELERMGRRVLLE-DRGLSFGVAARDQE 518

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
               PL ++ G    +RG +++++   G+ L+ ++++     +A   +I
Sbjct: 519 LVGAPLWVVVGARSLARGEVELRNRVDGRTLTVQLRDVAQAVDAEAGRI 567


>gi|207108695|ref|ZP_03242857.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 254

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|83647272|ref|YP_435707.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123753567|sp|Q2SDJ2|SYT_HAHCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|83635315|gb|ABC31282.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 637

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETP-LLEYSDSLGKFLPDEDR 65
           ++ E P G     +    +   I   +R     + +  I+TP ++E +  L +     ++
Sbjct: 255 MQEEAP-GMVFWHSDGWTLYQVIEQYMRKQLRKHDYKEIKTPQVVERT--LWEKSGHWEK 311

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
               +F+ Q +D +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 312 FRDDMFTTQSED-RDFAIKPMNCPCHVQVFNQGLRSYRDLPLRLAEFGSCHRNEASGALH 370



 Score = 36.7 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 59/231 (25%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E    +     +  +    E+   +        G +E+   SE   
Sbjct: 381 DDAHIFCTEEQIQEEVGKFIDFLHEVYADFGFSEIIYKLSTRPEKRVGSDEIWDKSEKAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
               ++  +        G  Y     +        + +              G       
Sbjct: 441 ADALDAKGLPWEELPGEGAFYGPKVEFSLKDCLGRLWQCGTVQVDFSMPGRLGAQYVSDE 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             R     +           + + ++  E +  +      V I  +          +   
Sbjct: 501 QVRKTPVMLHRAILGSFERFIGILIEHYEGAFPSWLAPTQVAILNI--TDKQADYCKKIG 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           ++L   G R  + L  ++    +++       P   + G  E     L I+
Sbjct: 559 EILNDKGFRVRLDL-RNEKINYKIREHTLNRVPFLAVVGDKEVETQCLAIR 608


>gi|59798520|sp|Q6A964|SYG_PROAC RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
          Length = 472

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +SD   K +     LR      +     ++  G + +  D    P  I      
Sbjct: 381 VLPLSRNSDLSPKARDLAARLREH-WNVDFD--DAQAIGKRYRRQDEIGTPFCITVDFDS 437

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++     +    I   E +   +
Sbjct: 438 LEDDAVTIRERDTMAQQRVSIDKVEEYLGGK 468


>gi|291320191|ref|YP_003515452.1| glycyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752523|emb|CBH40495.1| Glycyl tRNA synthetase (Glycine tRNA ligase) [Mycoplasma
           agalactiae]
          Length = 458

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 26/96 (27%), Gaps = 2/96 (2%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           P     +        K +   + L    I   +    + + G + +  D    P  I   
Sbjct: 365 PYKFAILPLVKKLNEKAEEIYKQLLKLNIP--ITYDDAGSIGKRYRRQDSIGTPYCITID 422

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               +   + I++     +    I +   + +    
Sbjct: 423 YDSLNDECITIRNRDSMSQERISISSLYEFAQKTFK 458


>gi|302346317|ref|YP_003814615.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150675|gb|ADK96936.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 649

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/128 (11%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F        V ++              V I  +          +          +R
Sbjct: 520 HRAPFGSLERFTAVLIEHTAGHFPLWLTPDQVAILPIS--EKYNDYARKVKAYFDAHDVR 577

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           + M    ++  G +++  + +  P  +I G  E + G++ ++    G++ +  ++     
Sbjct: 578 SIMD-DRNEKIGRKIRDNELKRVPYMVIVGEKEAAEGLVSMRQQGGGEQATMTMEAFAER 636

Query: 467 REARVAQI 474
               VA+ 
Sbjct: 637 INNEVAEQ 644


>gi|296129352|ref|YP_003636602.1| prolyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021167|gb|ADG74403.1| prolyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 597

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 20/72 (27%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++   +R      G   +  P L   +               +F L
Sbjct: 40  GIYTWLPLGLRVLAKVEQVVREEMAAIGAQEVHFPALLPKEPYEA-TGRWTEYGPNIFRL 98

Query: 74  QDDDGQWISLRY 85
           +D  G    L  
Sbjct: 99  KDRKGGDYLLAP 110


>gi|114659241|ref|XP_001144153.1| PREDICTED: hypothetical protein [Pan troglodytes]
 gi|332844841|ref|XP_001144319.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           1 [Pan troglodytes]
          Length = 707

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/148 (10%), Positives = 40/148 (27%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 558 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 617

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               +      G  A++ L  +     +++ A        ++ G  E+    + ++    
Sbjct: 618 ALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTRDN 677

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  + +     +      T+   E
Sbjct: 678 KIHGEILVTSAIDKLKNLKKTRTLNAEE 705



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 329 FLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 387

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 388 D-TFALKPMNCPGHCLMFAHR 407


>gi|331268359|ref|YP_004394851.1| glycyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329124909|gb|AEB74854.1| glycyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 463

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/216 (6%), Positives = 48/216 (22%), Gaps = 8/216 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  H   +     +       E +   +   +     +        +    +        
Sbjct: 238 EWFHYWKDYCWKFLLDLGMTEENLRFRDHGEEELSFYSNATSDIEFLFPFGWGELWGIAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +    +      +       +  V      ++ A   ++         + LE+  
Sbjct: 298 RTDYDLKKHMEHSGQELTYLDPTTNEKYVPYVIEPSLGADRVALAFLVDAYDEEELENGD 357

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + P     +        K       L +      +    + + G + +  
Sbjct: 358 TRTVLRLHPALAPFKAAILPLSKKLSEKALEVYSKL-SKKFN--IDYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           D    P  I           + ++D     ++   I
Sbjct: 415 DEIGTPYCITVDFDTLEDNTVTVRDRDNMTQVRLSI 450


>gi|322807830|emb|CBZ05405.1| prolyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 412

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             L            V++T  +  D       +     L   GI   +     +  G + 
Sbjct: 302 DELGIVWPMETSAFKVIVTIANVKDEQQFKVGEKIYSSLVNIGIGTILDDRKERA-GVKF 360

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K AD    P+ I  G        ++IK     ++    I   +   ++
Sbjct: 361 KDADLWGIPIRITVGKN-IKENNVEIKLRNSKEKKEIPIDQLQESIKS 407


>gi|218782046|ref|YP_002433364.1| threonyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226701455|sp|B8FN26|SYT_DESAA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|218763430|gb|ACL05896.1| Threonyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 636

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/59 (11%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G      + + + N +L   R  ++  G+   +TP++       +     +   + +++
Sbjct: 257 GMPFFHARGMELWNALLAYWREEHKKAGYVETKTPIMLNKSLWERS-GHWENYRENMYT 314



 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 2/131 (1%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G  ++     +        I R +  L    +    +       +  +  + D    
Sbjct: 490 TYVGADNQRHRPVMIHRVIYGSIERFLGILIEHYAGKFPLWLSPCQAV-VLAMNDDVAGY 548

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L  AG+R E+ L  +++   +++ A     PL +  G  E +   L ++ L  
Sbjct: 549 AKEVKARLEEAGLRMEIDL-RAESINKKVRDAQLSKIPLMLTVGGKEEAAQTLAVRTLDG 607

Query: 453 GKELSREIKNN 463
             +    I N 
Sbjct: 608 KVKYGVTIDNF 618


>gi|78212568|ref|YP_381347.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Synechococcus
           sp. CC9605]
 gi|123756917|sp|Q3AKU0|SYT_SYNSC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|78197027|gb|ABB34792.1| threonyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 611

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/96 (11%), Positives = 33/96 (34%), Gaps = 1/96 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +    +     +     L  AG+RA +     +  G  ++  ++   P+  + G  
Sbjct: 509 QVRLLPVTDEVQPYAEQLLDQLTKAGVRATVDRSGDR-LGKLIRTGEQMKIPVLAVIGAK 567

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           E  +  + ++    G      + +  S  +   ++ 
Sbjct: 568 EAEQNAVSLRSRRDGDLGVTAVSDLLSAAQMANSER 603



 Score = 42.1 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 2/109 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  RIR  I +  R  +   G++ + TP +    SL K     D   + +F  
Sbjct: 229 GLVFWHPRGARIRLLIEEFWRQAHFEGGYELLYTPHVADI-SLWKTSGHLDFYAESMFGP 287

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHG 121
            + D +   L+           A    +    P R   +G V+R E+ G
Sbjct: 288 MEVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYERPG 336


>gi|289427082|ref|ZP_06428798.1| glycine--tRNA ligase [Propionibacterium acnes J165]
 gi|289159551|gb|EFD07739.1| glycine--tRNA ligase [Propionibacterium acnes J165]
          Length = 463

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +SD   K +     LR      +     ++  G + +  D    P  I      
Sbjct: 372 VLPLSRNSDLSPKARDLAARLREH-WNVDFD--DAQAIGKRYRRQDEIGTPFCITVDFDS 428

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++     +    I   E +   +
Sbjct: 429 LEDDAVTIRERDTMAQQRVSIDKVEEYLGGK 459


>gi|225377160|ref|ZP_03754381.1| hypothetical protein ROSEINA2194_02806 [Roseburia inulinivorans DSM
           16841]
 gi|225211065|gb|EEG93419.1| hypothetical protein ROSEINA2194_02806 [Roseburia inulinivorans DSM
           16841]
          Length = 465

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 32/103 (31%), Gaps = 3/103 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV I  +          +     L       E       N G + +  D    
Sbjct: 365 HFHPALAPVKIGVLPLSKKLNEGAEKVYAQL-AKKYNCEFD--DRGNIGKRYRRQDEIGT 421

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P  +       + G + ++D    ++   +I++ +++   +  
Sbjct: 422 PFCVTYDFESETDGAVTVRDRDTMEQERIKIEDLDAYFAKKFE 464


>gi|195573301|ref|XP_002104632.1| Aats-glupro [Drosophila simulans]
 gi|194200559|gb|EDX14135.1| Aats-glupro [Drosophila simulans]
          Length = 996

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 51/159 (32%), Gaps = 22/159 (13%)

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTA 403
                     ++V   +              ++           D  ++     + L   
Sbjct: 756 GITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTKDDERAQLLDACKALEKR 815

Query: 404 ----GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSR 458
               G+R E     + + G +  + + +  PL +  G  +      + ++    G++++ 
Sbjct: 816 LVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDLKAQQLVAVR-RDTGEKITI 874

Query: 459 EIKNNESWREARVAQITIPISELVSTVKK-ILQENKEEI 496
            + + E             I  L+ T+ + +L + +E++
Sbjct: 875 PLADVEK-----------KIPALLETIHESMLNKAQEDM 902


>gi|294655282|ref|XP_002770111.1| DEHA2B10252p [Debaryomyces hansenii CBS767]
 gi|199429831|emb|CAR65481.1| DEHA2B10252p [Debaryomyces hansenii]
          Length = 733

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N + D +R  Y   G+D + TP + Y+  L +         + +FS 
Sbjct: 343 GSAFWLPHGTRIYNTLTDLMRKEYRQRGYDEVITPNM-YNSKLWETSGHWGNYKENMFSF 401

Query: 74  QDDDGQWISLRYDLTAP 90
           + +  +   L+      
Sbjct: 402 EVEK-ETFGLKPMNCPG 417



 Score = 40.6 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 35/449 (7%), Positives = 99/449 (22%), Gaps = 44/449 (9%)

Query: 56  LGKFLPDEDR----PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRI 111
             K   + D       + +F+             +++   A +   +   I         
Sbjct: 316 FLKEASERDHRRIGKEQELFTFN-----------EMSPGSA-FWLPHGTRIYNTLTDLMR 363

Query: 112 GPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
               +           +     +  G        E         E  G+K  +       
Sbjct: 364 KEYRQRGYDEVITPNMYNSKLWETSGH--WGNYKENMFSFEVEKETFGLKPMNCPGHCLM 421

Query: 172 RKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE--GRTDNSGDFTKG 229
            K  +    ++     D        L         GL  V+    +              
Sbjct: 422 FKSRERSYRELPWRVADFGVIHRNELSG----ALSGLTRVRRFQQDDAHIFCTQEQIESE 477

Query: 230 ANLTSEQIDIMVSFLSIDLEKSMH-ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
                + +  +      + +  +     + V            L          G     
Sbjct: 478 IGGVFDFLQKIYGVFGFEFKMELSTRPEKYVGDIETWNNAEANLENALNTFLGKGKWELN 537

Query: 289 IKISSTIVRGLE-YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
               +     ++   +  +        +  + Q P  F         D   +  +   + 
Sbjct: 538 PGDGAFYGPKIDIMISDALKRWFQCATIQLDFQLPNRFELEYKAETNDKSNTIGRPVMIH 597

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIR 406
                       +  +  +             I  +          Q     L    G  
Sbjct: 598 RAILGSVERMTAILTEHYKGKWPFWLSPRQ--ILVVPVGVKYFEYAQSLQNKLNKEYGFY 655

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           A++ +  +     +++           I G  E+ +  + +++    +E           
Sbjct: 656 ADVDVSGN-TLQKKVRTGQVYKYNFIFIVGEQEQEQQGVNVRNRDIQEE----------- 703

Query: 467 REARVAQITIPISELVSTVKKILQENKEE 495
              +     +   ++V  + K+ +E +++
Sbjct: 704 ---QGKNDMVKFDDVVQQLIKLREEMRQD 729


>gi|332220155|ref|XP_003259223.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 588

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/455 (10%), Positives = 112/455 (24%), Gaps = 86/455 (18%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRY 85
           R+++    +  Y   GF  ++TP L +S  L +     +   +                 
Sbjct: 202 RDQLRQLFKAEYARRGFSEVKTPTL-FSTKLWEQSGHWEHYQED---------------- 244

Query: 86  DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA 145
                                      P                  D   +      A  
Sbjct: 245 ---------------------MFAVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHC 283

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
            M      +   + ++  D+           G L +    G  +   RL   +  D    
Sbjct: 284 LMFAHRPRSWRELPLRLADF-----------GALHRAEASGSLRGLTRLRCFQQDDAHIF 332

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
                ++  +     D           +          LS      + +     +     
Sbjct: 333 CTTDQLEAEIQ-SCLDFLRSVYAVLGFSFRLA------LSTRPSGFLGDPCLWDQAEQVL 385

Query: 266 EKGFNELVVISELVR---KSGYNSNRIKISSTIVRGLEYYT-GCVYEAILGFPVMNEKQK 321
           ++   E     +L             + +   + R  +  T    ++  L F  +  K +
Sbjct: 386 KQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFD-LQYKGQ 444

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
                                   V      +G    ++ + +          + P  + 
Sbjct: 445 AGALER-----------------PVLIHRAVLGSMERLLGVLAESCGGKWPLWLSPFQVV 487

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +   ++     +   Q L+ AG+ +++   S      +++ A   +     + G  E+S
Sbjct: 488 VIPVGTEQEEYAREAQQSLQAAGLVSDLDADSGLTLSRRIRQAQLAHYNFQFVVGQKEQS 547

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           +  + I+        +R+ +    W      Q  +
Sbjct: 548 KRTVNIR--------TRDNRRLGEWDLPEAVQRLV 574


>gi|298373605|ref|ZP_06983594.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274657|gb|EFI16209.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 650

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/418 (10%), Positives = 104/418 (24%), Gaps = 40/418 (9%)

Query: 69  GVFSLQD----------DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
            +F+  D            G  + LR +          +         +        +  
Sbjct: 255 ELFTFSDMVGKGLPLWLPKGTDLRLRLEN-------FLKKLQKRYGYQQVITPHIGAKQL 307

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGI 178
               G + ++ +     + +  E  +  +  M       +       +  +  R    G 
Sbjct: 308 YVTSGHWAKYGKDSFQPIQTPEEGEEYLLKPMNCPHHCEIYKSTPKSYKDLPFRVAEFGT 367

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
           + +    G+     R+      D         +K    +            A        
Sbjct: 368 VYRYEQSGELHGLTRVRSFTQDDAHLFCRPDQIKEEFIKVM--EIILIIFKALRFDNFEA 425

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE--LVVISELVRKSGYNSN-RIKISSTI 295
            +     +D EK +       K   A  +   E  L  + E    + Y       +   +
Sbjct: 426 QISLRDKVDREKYIGSDENWEKAENAIIEACRETGLKAVVEYGEAAFYGPKLDFMVKDAL 485

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
            R  +  T    +     P   E +              D    R    +    G    +
Sbjct: 486 GRRWQLGT---IQVDYNLPERFELEYTGA----------DNQKHRPVMIHRAPFGS---M 529

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R +  L    +    +       +  +          Q     L    +RA +     +
Sbjct: 530 ERFVAVLIEHTAGKFPLWLTPEQAV-VLPISEKFNEYAQQVASRLNILDVRA-IGDFRDE 587

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             G +++  + ++ P  +I G  E     + ++   +G +   ++          V +
Sbjct: 588 KIGRKIRDNELKHIPYLLIVGNDEMETNTVAVRRQGEGDKGKMKVDEFAKMINDEVNE 645



 Score = 42.1 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL 50
           +G      K   +R R+ + ++ + + YG+  + TP +
Sbjct: 265 KGLPLWLPKGTDLRLRLENFLKKLQKRYGYQQVITPHI 302


>gi|288925105|ref|ZP_06419041.1| proline--tRNA ligase [Prevotella buccae D17]
 gi|288338295|gb|EFC76645.1| proline--tRNA ligase [Prevotella buccae D17]
          Length = 493

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 69/235 (29%), Gaps = 25/235 (10%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V ++   +         + S   R          EA++      +       G     
Sbjct: 194 LHVYAKFAEEWMAVPVVQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 +++               +RL+ AL                    V+I  +   
Sbjct: 254 SFDVTYLNKDNKPEYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVVIIPITKG 313

Query: 387 SDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
           +D L    +K Q     LR  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 NDQLQAINAKLQPVIDRLRDMGISVKYDDADNKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK-ILQENKE 494
               ++I      ++ S          E            L+  ++K +L++ K 
Sbjct: 372 EDNTIEIMRRDTLEKESVSFDGIAERVEG-----------LLEDIQKNLLEKAKN 415


>gi|167749838|ref|ZP_02421965.1| hypothetical protein EUBSIR_00806 [Eubacterium siraeum DSM 15702]
 gi|167657150|gb|EDS01280.1| hypothetical protein EUBSIR_00806 [Eubacterium siraeum DSM 15702]
          Length = 589

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 60/543 (11%), Positives = 140/543 (25%), Gaps = 98/543 (18%)

Query: 24  RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL 83
           RI  +I   IR   +      ++ P++  + SL +     +     +    D +   + L
Sbjct: 63  RITKKIEQIIREEMDKIDGQEVQFPVVMPA-SLWQESGRYESIGSELLRFTDRNRMPMVL 121

Query: 84  RYDLT-----APLARYVAENFDTIVFPCRTYR--------------------IGPVFRNE 118
              +T       L R   +++    F     +                    +   +   
Sbjct: 122 G--MTHEEAAVHLVREYGKSYTKYPFMIYQIQTKFRDEARPRGGLIRVREFTMKDAYSFH 179

Query: 119 KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY---------HIGI 169
                  + + +C              E+  + +D+    G   +++          I  
Sbjct: 180 TSQEDLEQYYDKCHKAYENIFRRAGVPEVISVKSDSGMMGGSISHEFMLLTPVGEDTIAS 239

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKG 229
            +    +  +E      ++  +E    +  +   +   ++ +   L   +  +       
Sbjct: 240 CHECGFNANMEAADSIIENTRDEVSAPMELVHTPNIHTIEEICDFLHTPKEKSCKAVVYQ 299

Query: 230 ANLTSEQI------------DIMVSFLSID-LEKSMHELYELVKGTIAGEKGFNELVVIS 276
            N     +              + +FL  +     + E   L  G I        + V+ 
Sbjct: 300 RNADDSYVVVFTRGDIDVNETKLRNFLGCEIHPAVITEECGLNAGYIGPVGLPENMTVLF 359

Query: 277 ELVRK------SGYNSNRIKISSTIV-RGLEYYTGCVYEAILGFPVMNEKQKP------- 322
           +   +       G N      +   + R         +  IL   +     K        
Sbjct: 360 DTSLQNTNNLSCGANKEEYHYTGLDIDRDCANVEYHDFAKILDGGICPNCHKHSISISRG 419

Query: 323 -VVFGSVGGGGRYDGLVSRFK-----GQNVPATGFSIGISRLIVA--LKSLE-----SST 369
             V      G +Y   +          +  P  G        + A   ++          
Sbjct: 420 IEVGNIFQLGTKYTKTMGMTYLDSNGEEKTPIMGCYGIGVGRLAASVCEAHHDDYGPIWP 479

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRN 428
             I      +      D+D  +        L+ AG  AE+     + + G     AD   
Sbjct: 480 MPIAPWQVHICAVRSDDADVKACADKLYDTLQNAG--AEVIYDDRQVSAGVMFSDADLLG 537

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            PL ++           +I                      +     +P+ E    V+++
Sbjct: 538 VPLRVVVSPRNLKDNCCEI------------------SARDKSFSYKVPVEETADKVQEL 579

Query: 489 LQE 491
           ++E
Sbjct: 580 IKE 582


>gi|325261340|ref|ZP_08128078.1| proline--tRNA ligase [Clostridium sp. D5]
 gi|324032794|gb|EGB94071.1| proline--tRNA ligase [Clostridium sp. D5]
          Length = 480

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 12/108 (11%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I    H    L K      +L+ AG +A++   S K+ G +    +    P  I  G  +
Sbjct: 297 IPIAQHKEGVLDKANELLDVLKAAGYKAKID-DSEKSPGWKFSEQEMLGIPTRIEIGPKD 355

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
                + +      +++   I            +IT  + E++ T++K
Sbjct: 356 IENNQVVVVRRDTREKIVVSID-----------EITTKLGEILETIQK 392


>gi|229062588|ref|ZP_04199898.1| Glycyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228716691|gb|EEL68387.1| Glycyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 458

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 57/238 (23%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +       + +           
Sbjct: 223 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEDELSHYSNATTDIEFRFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L       +     +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDFVVDFD--ET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|145251301|ref|XP_001397164.1| prolyl-tRNA synthetase YHR020W [Aspergillus niger CBS 513.88]
 gi|134082695|emb|CAK42588.1| unnamed protein product [Aspergillus niger]
          Length = 604

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 15/110 (13%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                +       LR AG+RAE  L    + G +    + R  PL +  G GE + G + 
Sbjct: 401 KKLYDEVDRLVSTLREAGVRAESDLREGYSPGWKFNEWELRGVPLRLEFGPGELAGGFVT 460

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                         ++          Q    ISEL + V  +L+  ++++
Sbjct: 461 -----------AARRDVPGKDGKAPIQ----ISELTTAVPALLETIQKDL 495


>gi|47220916|emb|CAG03123.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 822

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 35/99 (35%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
              +G    +VA+ +   +      + P  +  +  +       +   +    AG+ A++
Sbjct: 690 RAVLGSVERMVAILTENYAGKWPLWLSPRQVMVVPVNPACEDYARKVCKQFTEAGLMADV 749

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            L S      +++ A        ++ G  E+    + ++
Sbjct: 750 DLDSGCLLNRKIRNAQLAQYNFILVVGEKEKMTNSVNVR 788


>gi|308063100|gb|ADO04987.1| prolyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 577

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 89/295 (30%), Gaps = 14/295 (4%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +++    L          L+ VK L        N+ +  + +    +   ++  F+    
Sbjct: 286 IHKDKETLACFFVRGDDNLEEVKALNALNLLGANALELREASQKDLDNAGLIAGFIGPYG 345

Query: 249 EK---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            K   S     E +K       G NE    +  V   G+ +        +          
Sbjct: 346 LKKHVSYIIFDEDLKEGDCLIVGANEKDFHAVGVDLKGFENLVYADIVQVKESDHCPNCQ 405

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +    K     +      +    ++ +   +   G  I  SRL+ A+   
Sbjct: 406 GALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNAKERFFEMGCYGIGI--SRLLSAILEQ 463

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +        T N      V++ +   D           + L   G+ A +    ++ FG 
Sbjct: 464 KSDDLGCVWTKNTAPFDVVIVVSNWKDGAQKKLAFEVYERLLQKGVDALLDDRDAR-FGA 522

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
           +++  +     LA+I G         + IK     K+  ++I+  E   E   ++
Sbjct: 523 KMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDIELEEKILEMLESE 577


>gi|260591222|ref|ZP_05856680.1| glycine--tRNA ligase [Prevotella veroralis F0319]
 gi|260537087|gb|EEX19704.1| glycine--tRNA ligase [Prevotella veroralis F0319]
          Length = 515

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/234 (8%), Positives = 50/234 (21%), Gaps = 29/234 (12%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP------VMNEKQKPVVFG 326
                     G   +  +                 E  + F       + +     +   
Sbjct: 287 KHRLAWHEALGMGDDNYRFHDHEKLAHYANAATDIEFRMPFGFKEVEGIHSRTNFDLSQH 346

Query: 327 SVGGGGRYDGLVSRFKGQNVP-----------ATGFSIGISRLIVALKS----LESSTNN 371
               G +            VP                +  S     L++    +      
Sbjct: 347 EKFSGRQIKYFDPERNENYVPYDVETSIGVDRMFLSVMCHSYTEEPLENGSSRIVLKLPE 406

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  + +      K Q     L          + +  + G + +  D    P 
Sbjct: 407 PLAPVKCAVLPLVNKDGLPEKAQEIVNQL---KFHFNTHMEAKDSIGKRYRRQDAIGTPF 463

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
            +       +   + ++     K+    ++      E R     + I+ L+  +
Sbjct: 464 CVTVDGDTLNDNTVTLRYRDSMKQERVPVEKLREIIEDR-----VSITSLLKKI 512


>gi|224541864|ref|ZP_03682403.1| hypothetical protein CATMIT_01036 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525214|gb|EEF94319.1| hypothetical protein CATMIT_01036 [Catenibacterium mitsuokai DSM
           15897]
          Length = 479

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              +     V+I      +  L K       L+ AG+R  +   S K+ G +   A+ R 
Sbjct: 286 PPRLAPTQVVIIPIQQKKAGVLEKADEIAAQLKAAGMRVSVD-ASDKSPGWKFSEAEMRG 344

Query: 429 CPLAIIQGTGERSRG-MLQIK 448
            P+ I  G  +   G  + +K
Sbjct: 345 IPVRIEVGPRDIENGHCVVVK 365


>gi|170759933|ref|YP_001788845.1| putative prolyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406922|gb|ACA55333.1| putative prolyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 545

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 28/102 (27%), Gaps = 2/102 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                     ++      D       +     L   GI   +     +  G + K AD  
Sbjct: 441 WPMETSAFKAIVTIANVKDEQQFKVGEKIYSSLVNIGIGTILDDRKERA-GVKFKDADLW 499

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             P+ I  G        ++IK     ++    I   +   ++
Sbjct: 500 GIPIRITVGKN-IKENNVEIKLRNSKEKKEIPIDQLQESIKS 540


>gi|255710799|ref|XP_002551683.1| KLTH0A05192p [Lachancea thermotolerans]
 gi|238933060|emb|CAR21241.1| KLTH0A05192p [Lachancea thermotolerans]
          Length = 740

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++D +R  Y   GFD + TP + Y+  L +         + +F+ + + 
Sbjct: 357 WLPHGTRIYNNLVDLMRAEYRKRGFDEVITPNM-YNSKLWETSGHWGNYKENMFTFEVEK 415

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 416 -ETFGLKPMNCPG 427



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 47/165 (28%), Gaps = 23/165 (13%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D   +    + V      +G    + A+ +   +      + P  +  +          Q
Sbjct: 591 DNQENENYERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQEYAQ 650

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGN----QLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                L      A++ L  +         Q+            I G  E +   + I++ 
Sbjct: 651 EVRDKLCEQDFYADVDLTGNTLQKKVRNGQM-----LKYNFIFIVGEQEMTEKSVNIRNR 705

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
              ++              +    TI    ++  +KK+ +E + +
Sbjct: 706 DVIEQ--------------QGKNATIAFETVLQQLKKLKEEKRLD 736


>gi|56475898|ref|YP_157487.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|73919766|sp|Q5P7X5|SYT_AZOSE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56311941|emb|CAI06586.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 638

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 44/152 (28%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +  ++   +R    + G+  ++TP +       K     D  ++ +F+ 
Sbjct: 261 GMVFWHAKGWTLWQQVEQYMRRTILDNGYQEVKTPQIVDRSLWEKS-GHWDMYSELMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q  + +  +++        +   +   +                 +            + 
Sbjct: 320 Q-SEKRDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGIMRVRNF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +    AD ++    A  +E +     D+
Sbjct: 379 VQDDAHIFCADEQVQTEAAAFIELLQKVYADF 410



 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    ++             + L+ AG R E  L  ++    +++       P  I
Sbjct: 535 WLAPVHAVVLNISEGQTDYATEVARRLKQAGFRVEADL-RNEKINYKIREHSVHKLPYQI 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  E++ G++ ++
Sbjct: 594 VIGEKEKAAGVVAVR 608


>gi|325188237|emb|CCA22777.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 756

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 3/106 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A        I +++L+ +R  Y   G++ + TP +   + L           + +F  
Sbjct: 378 GSAFWLPNGAHIFSKLLEFLRAQYRERGYNEVITPNMFNME-LWNTSGHAAHYKENMFVF 436

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
           + +  Q  +L+            ++                  +  
Sbjct: 437 EVES-QEFALKPMNCPSHCLMF-DHRLRSYRELPIRYADFGVLHRN 480


>gi|323692739|ref|ZP_08106967.1| glycyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323503181|gb|EGB19015.1| glycyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 462

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/227 (7%), Positives = 56/227 (24%), Gaps = 8/227 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +      E     +       + +   +  ++     ++       +    +        
Sbjct: 237 EWFAYWKEYCINWLKALGIKEDEMRARDHEQEELSFYSKATTDIEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   +       +     +    +      ++ A   ++         + +    
Sbjct: 297 RTDYDLTQHQNTSGQDMTYFDDEKKIKYIPYVIEPSLGADRVTLAFLCAAYDEEEIGEGD 356

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + PV I  +          +     L       E       N G + +  
Sbjct: 357 VRTVLHFHPALAPVKIGVLPLSKKLNEGAEKVYNELCKY-YNCEFD--DRGNIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           D    P  I       + G + ++D    +++   I   +++ E + 
Sbjct: 414 DEIGTPFCITYDFDSETDGAVTVRDRDTMEQVRVPITELKAYFEDKF 460


>gi|262394487|ref|YP_003286341.1| threonyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338081|gb|ACY51876.1| threonyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 642

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 95/350 (27%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 299 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E  + +              +
Sbjct: 359 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    S  I        G  Y     +        
Sbjct: 418 VVKLSTRPEKRVGSDEIWDQSEEALKQSLESMDIPYEIQEGEGAFYGPKIEFTLY---DC 474

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           ++   +              G  Y G  +      +        + R I  L    +   
Sbjct: 475 LDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 534

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +  M+         Q   Q L+ +GIRA+  L  ++  G +++    +  P
Sbjct: 535 PTWLAPEQAVL-MNITDKQSGYVQEIVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVP 592

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  ++ +  ++   + + E
Sbjct: 593 YMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISSRKLNLEE 642



 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 44/152 (28%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR   + YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   + + ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQEEVTNCIKMV 405


>gi|251789558|ref|YP_003004279.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247538179|gb|ACT06800.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 642

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/348 (13%), Positives = 92/348 (26%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E  + +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQVRDEVNNCIKMVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E    +E    +    N +        G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDETWDRAEEDLAAALTENGLPFEYQPGEGAFYGPKIEFTLHDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V       G      V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPGRLSASYVGENNERQVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV    M+            T+ L+ AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQAVVMNITDSQSDYVSELTRKLQDAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E   G + +     KDL          K  E  R   + Q+ 
Sbjct: 594 LVCGDKEVEAGKVAVRTRRGKDLGSMNVSEVITKLQEEIRSRSLHQLE 641



 Score = 40.2 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/203 (6%), Positives = 52/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGP-FMMDRVLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   + + +             + +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVRDEVNNCI--------KMVYDMYSTFGFEKIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++       RA + L     +
Sbjct: 425 EKRIGSDETWDRAEEDLAAALTE 447


>gi|227820981|ref|YP_002824951.1| ATP phosphoribosyltransferase regulatory subunit [Sinorhizobium
          fredii NGR234]
 gi|254801988|sp|C3MGT3|HISZ_RHISN RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|227339980|gb|ACP24198.1| ATP phosphoribosyltransferase regulatory subunit [Sinorhizobium
          fredii NGR234]
          Length = 379

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 44 PIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
           ++TP+++ ++       ++ R  + +F  Q + G  + LR + T P+ 
Sbjct: 24 RVDTPVIQPAEPFLDMAGEDLR--RRIFMTQSETGDSLCLRPEFTIPVC 70


>gi|269956954|ref|YP_003326743.1| glycyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305635|gb|ACZ31185.1| glycyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 466

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 26/91 (28%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +   +D L   +     LR      +  +  +   G + +  D    P  +      
Sbjct: 375 VLPLSKSTDLLPTAEKLAAELRQH-WNVDYDVTQA--IGKRYRRQDEIGTPFCVTVDFDT 431

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I+      +    +    S+  AR
Sbjct: 432 LDDQAVTIRHRDTMAQERVALDQVASYLAAR 462


>gi|254481727|ref|ZP_05094970.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214037856|gb|EEB78520.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 640

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 38/112 (33%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   I   +R   + + +  I+TP L    SL K     D+    +F L
Sbjct: 261 GMVFWHPAGWSIYQTIEQYMREGQQQHDYQEIKTPQLVDL-SLWKKSGHADKFGDDMFML 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
           + +D +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 320 KAED-REFAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH 370


>gi|164658475|ref|XP_001730363.1| hypothetical protein MGL_2745 [Malassezia globosa CBS 7966]
 gi|159104258|gb|EDP43149.1| hypothetical protein MGL_2745 [Malassezia globosa CBS 7966]
          Length = 509

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 52/450 (11%), Positives = 118/450 (26%), Gaps = 24/450 (5%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +R+  ++   I +         +E P L  S +L       +     
Sbjct: 58  QSASGTYTYLPIGLRMLKKLTAIIEDEMHQISASQLELPQL-LSPALWHKTGRFEAMGSE 116

Query: 70  VFSLQDDDGQWISLRY----DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEKHG 121
           +F L+D  G  + L      ++T  L     ++  ++        R +R  P  R     
Sbjct: 117 LFRLKDRRGNDMILAPTHEEEIT-KLVGMEIDSAKSLPVRVFQIGRKFRDEPRPRAGLLR 175

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK---RNDYHIGINNRKILDGI 178
              F        D     A     ++        + V      R+     +        +
Sbjct: 176 TKEFLMKDMYSFDVSVEDARITYEDVLCAYERIFQRVFCWDQARSSETTWMRATADSGTM 235

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
             K+              L + D+            LG G          G + T     
Sbjct: 236 GGKLSHEFHVPDPAGEDTLLSCDQCSYTSNVECAKSLGRGTKQEEQGHQHGRDETVTNAA 295

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
                 +     ++ E   +        +  +  ++ +      GY+             
Sbjct: 296 RAGDRCASCTHGTLREHKAI--------EVGHTFLLGTRYSEALGYHVVPRHADPKRPER 347

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           +    GC    I        ++    F +           S    Q              
Sbjct: 348 VPLQMGCYGIGITRVLGALAQRAAREFDAWHAATA---QTSSMPLQRRRPQRVGFFWPCE 404

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I   ++L   +        + + T      +++      ++L        +   + ++ G
Sbjct: 405 IAPFRALVLPSTPQHMDIAMRLCTQLDGGLAVTWADGMQELLHVPNEDVALDDRTHQSLG 464

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           ++L  +D    P+ +I G      G ++++
Sbjct: 465 SRLFDSDLMGYPIVLILGKHYDQTGEVEVR 494


>gi|315185841|gb|EFU19606.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 589

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/153 (9%), Positives = 33/153 (21%), Gaps = 8/153 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++   I    +  G   +  PL+   +   +    +      +   
Sbjct: 62  GLYSFLPLGLRVFYKLKRLIAGEMKRLGGQEVLVPLVNPMELWERS-GRDLLVGGDLVKF 120

Query: 74  QDDDGQWISLRY-------DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            D  G+ + +         +L     R        +      YR     R        F 
Sbjct: 121 SDRAGRQMVISPTHEEAMVELLRQSMRSYRMLPVFLYQFQTKYRDEERVRIGLLRSREFI 180

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                      +       ++            
Sbjct: 181 MKDGYSFHRTYADLNNFFPKVFHAYERVFRTCN 213



 Score = 42.5 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 31/112 (27%), Gaps = 4/112 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V + ++ +      K +   + L    +  +  L   + F     
Sbjct: 479 DEHGIVWPPQVAPFMVFLMSIGNSLSMKRKLEALAEALGDRALLDDRHLSPGRKFL---- 534

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            AD    P  I+        G +++K+   GK      +  E +      Q 
Sbjct: 535 DADLLGIPYRILLTQELLEEGKVEVKERTTGKVWKLAYQRVEDFVHYLEEQY 586


>gi|242021495|ref|XP_002431180.1| eif2alpha kinase gcn2, putative [Pediculus humanus corporis]
 gi|212516429|gb|EEB18442.1| eif2alpha kinase gcn2, putative [Pediculus humanus corporis]
          Length = 1517

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 47/386 (12%), Positives = 118/386 (30%), Gaps = 37/386 (9%)

Query: 25   IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
            + + + + + ++ + +G     +P       L     +  +    V  L    G  ++L 
Sbjct: 945  LIDSVKEKMESVLKKHGALYFSSP------LLLPQNNENKKVETKV-KLMTHSGSIVNLP 997

Query: 85   YDLTAPLARYVAENF--DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
            YDL    ARY+A         +                       F          +AE 
Sbjct: 998  YDLRISFARYLACKPFTRLRRYAVEKVYKEKKVHGLHPKEQYECAFDIVAPSRSIGNAEL 1057

Query: 143  ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
                +     +  +++             R     +L+ + +H + +     +       
Sbjct: 1058 EVLSLMEETVNEFKSLKN------RNCVLRLNHCFLLKAVLIHFNSEKWFSDVFRILSTA 1111

Query: 203  LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGT 262
             D    +    +  +G    S +      L  + +  +        ++ +    +  K  
Sbjct: 1112 KDNKYFKKKLEINLQGIGIQSVNTLSNLFLKEDSLCNIK-------KELLSLTNKRGKTL 1164

Query: 263  IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
                  F++L  +     + G N   IKI    V   E+ +  +++ +    +  +K+  
Sbjct: 1165 EMLNTAFDKLQRVINDAEQYGLN-VPIKICLGTVCNSEHCSDIMFDLVYRMKITGKKE-- 1221

Query: 323  VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITT 382
               G +     ++      +  +  A G +I + +++  LK          ++    +  
Sbjct: 1222 ---GCITLMKLFELTPVNAENDSQSAVGLTIFLDKIVTVLKE--------DDIVSEYVVI 1270

Query: 383  MDHDSDSLSKYQ-MYTQMLRTAGIRA 407
               D +  SK +    + L  AG++ 
Sbjct: 1271 CSLDKNPFSKVKDSVFKKLWEAGVKC 1296


>gi|188581528|ref|YP_001924973.1| threonyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179345026|gb|ACB80438.1| threonyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 675

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 79/249 (31%), Gaps = 10/249 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNELVVIS 276
           D++  F     L +E + I    LS   +    ++   +          +  ++    + 
Sbjct: 387 DDAHIFCTEDQLAAECLKINDLILSTYADFGFDQILVKLSTRPEKRVGSDALWDHAEAVM 446

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
             V       +  +I + +  G   + G  +E +L   +  + Q            R+D 
Sbjct: 447 TRVLAQIEEQSGGRIKTAVNPGEGAFYGPKFEYVLRDAIGRDWQCGTTQVDFNLPERFDA 506

Query: 337 LVSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                  Q  P           + R    L    +    +  + PV +      SD+   
Sbjct: 507 SYIDADSQKKPPVMIHRAICGSMERFTGILIEHFAGHFPLW-LAPVQVVVATITSDADPY 565

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   ++L  AG+R E  L  ++    +++       P+ +  G  E     + ++ L  
Sbjct: 566 AREVVRVLERAGLRVEADL-RNEKINYKVREHSLAKVPVLLALGRREAEERTVSVRRLGS 624

Query: 453 GKELSREIK 461
            K  +  + 
Sbjct: 625 QKTTTLTLD 633


>gi|149198845|ref|ZP_01875887.1| prolyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149138043|gb|EDM26454.1| prolyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 577

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I + IR   E      I  P++  ++   +     D  ++ +   
Sbjct: 38  GIYTLLPLAKRMTTKIENIIREEMEAVDCQEIMMPVVNPAEIWQES-GRYDSVDQSLLRF 96

Query: 74  QDDDGQWISL 83
           +D + + + L
Sbjct: 97  KDRNQKDMVL 106



 Score = 43.3 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 30/105 (28%), Gaps = 1/105 (0%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
              +I      +I       +   + +   + L+  GI   +F       G     AD  
Sbjct: 467 WPISIAPYQVHVIALTGGQPEIKEEAEELYKNLQKEGIEV-IFDDRDPKPGFAFNDADLI 525

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             PL +I      ++   + K     ++          +   RV 
Sbjct: 526 GVPLRLIISKKSMAQDSYEFKTRDGSEKELIPKAEAFEFIVNRVK 570


>gi|114659235|ref|XP_001144545.1| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic isoform
           2 [Pan troglodytes]
          Length = 802

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/148 (10%), Positives = 40/148 (27%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 653 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 712

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               +      G  A++ L  +     +++ A        ++ G  E+    + ++    
Sbjct: 713 ALQVSSEFFEEGFMADVDLDHNCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTRDN 772

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  + +     +      T+   E
Sbjct: 773 KIHGEILVTSAIDKLKNLKKTRTLNAEE 800



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 424 FLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 482

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 483 D-TFALKPMNCPGHCLMFAHR 502


>gi|73951033|ref|XP_857231.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 4
           [Canis familiaris]
          Length = 798

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 29/92 (31%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ S          + P  +  +             +      G  A++ L  S  
Sbjct: 673 ERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSAFFEEGFMADVDLDHSCT 732

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +++ A        ++ G  E++   + ++
Sbjct: 733 LNKKIRNAQLAQYNFILVVGEKEKTNNAVNVR 764



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + ++  L +        ++ +F+  D +
Sbjct: 421 FLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNM-FNSKLWETSGHWQHYSENMFTF-DIE 478

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 479 KDTFALKPMNCPGHCLMFAHR 499


>gi|332673080|gb|AEE69897.1| proline--tRNA ligase [Helicobacter pylori 83]
          Length = 577

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + LR  
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLRQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKN 462
           G+ A +    + +FG +++  +     LA+I G         + IK     K+  ++ + 
Sbjct: 508 GVDALLDDREA-HFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTEL 566

Query: 463 NESWREARVAQ 473
            E   E   ++
Sbjct: 567 EEKILEMLESE 577


>gi|317008889|gb|ADU79469.1| prolyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 577

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 43.7 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 2/107 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
            T N      V++ +   D           + L   G+ A +    ++ FG +++  +  
Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDAR-FGAKMRDFELI 530

Query: 428 NCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
              LA+I G         + IK     K+  ++I+  E   E   ++
Sbjct: 531 GERLALIIGKQTLESREFECIKRANLEKQTLKDIELEEKILEMLASE 577


>gi|291563934|emb|CBL42750.1| glycyl-tRNA synthetase, dimeric type [butyrate-producing bacterium
           SS3/4]
          Length = 462

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/180 (9%), Positives = 49/180 (27%), Gaps = 8/180 (4%)

Query: 298 GLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
              +           + +   +       S       +  +      ++ A   ++    
Sbjct: 285 PFGWGELWGIADRTDYDLTQHQTVSGQDMSYFDDEVNEKYIPYVIEPSLGADRVTLAFLC 344

Query: 358 LIVALKSLES-----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLG 412
                + LE        +    + PV +  +          +     L +     E    
Sbjct: 345 SAYDEEELEGGDVRTVMHFHPAIAPVKVGILPLSKKLNEGAEKVYAEL-SKYYNCEFD-- 401

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              N G + +  D    P  +       + G + ++D    +++   I   +S+ E +++
Sbjct: 402 DRGNIGKRYRRQDEIGTPFCVTYDFDSETDGAVTVRDRDTMEQVRIPIAELKSYFEEKLS 461


>gi|325678420|ref|ZP_08158040.1| proline--tRNA ligase [Ruminococcus albus 8]
 gi|324109921|gb|EGC04117.1| proline--tRNA ligase [Ruminococcus albus 8]
          Length = 480

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 19/119 (15%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V++         L K Q   + L+ AGIR ++   S ++ G +    + +  P+ I  G 
Sbjct: 295 VIVPIQQFKEGVLEKAQEVCEQLKAAGIRVKVD-DSEQSPGWKFAEYEMKGVPVRIELGP 353

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
            +   G   I                   R  R    T P++ELV TV   L+  +E I
Sbjct: 354 KDIENGQCVI-----------------VTRHDREKTFT-PLTELVETVNAKLEAVREGI 394


>gi|237734398|ref|ZP_04564879.1| glycyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382628|gb|EEO32719.1| glycyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 457

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/232 (9%), Positives = 51/232 (21%), Gaps = 13/232 (5%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +     +K + +L    +     +    EL   S+                        
Sbjct: 235 DYWKSYCQKFLFDLGLKEENLRFRDHEKEELSFYSK-----ATCDVEYNFPFGWGELWGI 289

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                Y+        N  +K + +       +Y   V              +  S     
Sbjct: 290 ADRTNYDLT---QHQNHSKKSLEYLDPTTNEKYIPYVIEPSVGADRLFLSVLCDSYEEEI 346

Query: 362 LK--SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           L+             + P  +  +        K       L       E     +   G 
Sbjct: 347 LEDGETRVVMKLHPSVAPFKVAILPLTKKQSDKATEIYSQL-AKYFNCE--YDVAGQIGK 403

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           + +  D    P  +           + ++D    +++   I     +   ++
Sbjct: 404 RYRRQDAIGTPYCVTVDFDTMEDETVTVRDRDTMEQIRLPINQLVDYISKKI 455


>gi|288560211|ref|YP_003423697.1| prolyl-tRNA synthetase ProS [Methanobrevibacter ruminantium M1]
 gi|288542921|gb|ADC46805.1| prolyl-tRNA synthetase ProS [Methanobrevibacter ruminantium M1]
          Length = 468

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
            K++  + I   D   + ++K     + L + GIR +M     +       + + +  PL
Sbjct: 278 PKQITIIPIIFKDGGEEVMAKCLEIKKSLESKGIRVQMDTRDIRPGKKFFDW-ELKGTPL 336

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
               G  +    +  +     G+++   ++++              + +L+  +++ L+ 
Sbjct: 337 RFELGPRDLKNNVAILGRRDTGEKIEISLEDDLPS----------KVEDLLMEIEENLKA 386

Query: 492 N 492
            
Sbjct: 387 K 387


>gi|259482954|tpe|CBF77921.1| TPA: glycyl-tRNA synthetase (AFU_orthologue; AFUA_5G05920)
           [Aspergillus nidulans FGSC A4]
          Length = 689

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 10/119 (8%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VL+  +  +       Q  T  LR  G+ + +   SS + G   +YA  D    P  
Sbjct: 572 PTKVLLVPLSSNPAFRPMVQELTTKLRRLGVSSRVD-DSSASIGK--RYARNDELGTPFG 628

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +           + ++D    K++    +      ++ V        E    V+K L E
Sbjct: 629 VTVDFQSVKDNTITLRDRDSTKQVRASQEEILQALKSLVEG-----EETWEDVRKRLPE 682


>gi|226366266|ref|YP_002784049.1| threonyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254783533|sp|C1B4B5|SYT_RHOOB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226244756|dbj|BAH55104.1| threonyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 685

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY-ADRRNCPLA 432
            + PV +  +              + L+ AG+RAE+     +         A +   P  
Sbjct: 570 WLAPVQVVGIPVAETFADHLFDVVKRLKAAGVRAEVDASDDRMQKKIFNNTAQK--VPFM 627

Query: 433 IIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQIT--IPISELVS 483
           ++ G  +   G +  +    G +++   + +        + +     P +EL+ 
Sbjct: 628 LLAGARDVEAGAVSFR-FRDGTQVNGVPVDDAVRIVTDWIGRRENASPTAELLQ 680


>gi|208434185|ref|YP_002265851.1| prolyl-tRNA synthetase [Helicobacter pylori G27]
 gi|226701296|sp|B5ZA05|SYP_HELPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|208432114|gb|ACI26985.1| prolyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 577

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 42.5 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + L   
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKN 462
           G+ A +    ++ FG +++  +     LA+I G         + IK     K+  ++ + 
Sbjct: 508 GVDALLDDRDAR-FGAKMRDFELIGERLALIVGKQALESKEFECIKRANLEKQTLKDTEL 566

Query: 463 NESWREARVAQ 473
            E   E   ++
Sbjct: 567 EEKILEMLASE 577


>gi|207092740|ref|ZP_03240527.1| prolyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 204

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108


>gi|254362299|ref|ZP_04978411.1| threonine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093879|gb|EDN74807.1| threonine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 643

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/350 (12%), Positives = 96/350 (27%), Gaps = 13/350 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE I  +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIESEVISCIKMVYDIYSTFGFTN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G + +   +E    +   +N ++       G  Y     + A+    
Sbjct: 416 IAVKLSTRPENRIGDDAMWDRAEKGLANALRNNGLEYEIQEGEGAFYGPKIEF-ALRDCL 474

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
               +   V       G      V+   G+  P       +G     + + + E +    
Sbjct: 475 GREWQCGTVQLDFALPGRLAASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ---LKYADRRN 428
             + P     M+         Q   + L  AGIR +  L + K  F  +   L+      
Sbjct: 535 TWLAPTQAVVMNITDSQADYVQQVVKQLSDAGIRVKADLRNEKVGFKVREHTLRR----- 589

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            P  ++ G  E + G + ++        +  + +     + ++    + +
Sbjct: 590 VPYMLVCGDKEIAEGKVSVRTRKGADLGTYLVSDLVEILKNQIKARELKL 639



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIESEVISCIKMV 404


>gi|325954344|ref|YP_004238004.1| prolyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323436962|gb|ADX67426.1| Prolyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 492

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/228 (11%), Positives = 58/228 (25%), Gaps = 13/228 (5%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI----VRGLEYYTGCVYEAI 310
             E        E+  +E   + ++  +   N   I +         R          EA+
Sbjct: 170 WQEGHTAHATKEEAISESRQMLDVYTEVVENHMAIPVVRGCKTPSERFAGAEETYTIEAM 229

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G            +    Q+          +RL+ AL        
Sbjct: 230 MQDGKALQAGTSHFLGQNFAKAFDVKFTTNEGKQDYVWATSWGVSTRLMGALIMTHSDDY 289

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L             L + GI  +         G + 
Sbjct: 290 GLVLPPKIAPIQVVIVPIFRSEEQLIQVSEVANRIKNELHSIGISVKFDDDEKTKPGWKF 349

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              + +  P+ I  G  +     ++I      ++ +  +    S+ E 
Sbjct: 350 AEYELKGVPVRIAIGPKDLENNQVEIARRDTLEKSTIPMDGISSYVEN 397


>gi|319902630|ref|YP_004162358.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides
           helcogenes P 36-108]
 gi|319417661|gb|ADV44772.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides
           helcogenes P 36-108]
          Length = 646

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 50/461 (10%), Positives = 108/461 (23%), Gaps = 82/461 (17%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +R R+ D +R I   Y +  +  P                  NK ++ 
Sbjct: 261 KGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCP---------------PIGNKLLY- 304

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
                                                  G   +  K          + +
Sbjct: 305 ------------------------------------ITSGHYAKYGKDSFQPIHTPEEGE 328

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +          +      + + +             R    G + +    G+     
Sbjct: 329 EYFLKPMNCPHHCMIYKNSPRSYKDL-----------PLRLAEFGTVCRYEQSGELHGLT 377

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
           R+      D         VK          S  F        E    +   ++ D     
Sbjct: 378 RVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMDFENFEAQISLRDKVNRDKYIGS 437

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAIL 311
            E +E  +  I        L    E    + Y       +   I R  +  T    +   
Sbjct: 438 DENWEKAEQAIIEACEEKGLKARIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDY 494

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P   + +                     +   V    F      + V ++        
Sbjct: 495 NLPERFQLEYTGADNQK------------HRPVMVHRAPFGSMERFVAVLIEHTAGKFPL 542

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                 V I  +    +  ++       L+   IRA +    ++  G +++  + +  P 
Sbjct: 543 WLTPDQVAILPISEKFNDYAQEVKL--FLKKYDIRAIVD-ERNEKIGRKIRDNEMKRIPY 599

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            ++ G  E     + ++   +G + + +I+         V 
Sbjct: 600 MLVVGEKEAENKEIAVRKQGEGDKGTMKIEEFAKKISEEVQ 640


>gi|294495367|ref|YP_003541860.1| glycyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666366|gb|ADE36215.1| glycyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 585

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 52/424 (12%), Positives = 120/424 (28%), Gaps = 48/424 (11%)

Query: 77  DGQWISLRYDLTAP--------LARYVAENFDTIVFPCRTYRIGPVFRNE---------- 118
           +G+   LR + TA         LARY  E     V          +   +          
Sbjct: 152 NGRPGYLRPE-TAQGIFIDFQRLARYYREKLPFGVTQIGKSYRNEISPRQGVIRLREFTQ 210

Query: 119 -------KHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN 171
                       +  +    + D +   ++ A     +      EA+  K   +     +
Sbjct: 211 AEAEIFIHPQEKKHPEIAAVENDLIILYSDKAQERGELEEMTIREAIDKKIIAHEFLAYH 270

Query: 172 RKILDGILEKIGLHGD----DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
             + +  L++IG+  D     +  +  +   AID  D          +      +  D+ 
Sbjct: 271 IALTNRFLKRIGISPDKLRFRQHKKDEMAHYAIDCWDGEIKTTRFGWIETVGIADRTDYD 330

Query: 228 KGA--NLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS-----ELVR 280
             A   ++ + + + + +    + K      ++ K      K   ++         E + 
Sbjct: 331 LNAHTKMSKDDLAVYIEYDEPKMVKKFAVKPDMGKLGPLFRKKAKDVAETLKQLGPEELE 390

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           K G  +  +      V           E              +          Y  L   
Sbjct: 391 KDGDINIVVNGEEVSVPKDVVSAE---EVEEKISGETVVPHVIEPSYGIDRIFYTLLEHA 447

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
           ++ +  P         R ++         + I  +   ++  M +  + +SK +     L
Sbjct: 448 YETEMAPTAEEEKEEERTLL------KFKSEIAPIQVAVLPLMKNSDELVSKGRQIVSNL 501

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           +  G+   +    S   G + +  D    P +I           + I++    K++   +
Sbjct: 502 KDMGL--MVAYDDSGTIGRRYRRNDEIGTPYSITIDYETLEDNTVTIRERDTMKQVRTPV 559

Query: 461 KNNE 464
            + E
Sbjct: 560 SDLE 563



 Score = 44.4 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++ RI +  R  Y    GF  IETP +   D      
Sbjct: 29 GFYDYGPLGSTLKRRIENIWRQFYVVREGFMEIETPTIGIEDIFVASG 76


>gi|54400362|ref|NP_001005932.1| threonyl-tRNA synthetase, cytoplasmic isoform 2 [Danio rerio]
 gi|53734186|gb|AAH83525.1| Zgc:92586 [Danio rerio]
          Length = 624

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/124 (10%), Positives = 36/124 (29%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +          + P  +  +          Q   +     G+  ++ L     
Sbjct: 499 ERMIAILTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQRVQKEFHKVGLMTDVDLDPGCT 558

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              +++ A        ++ G  E+S   + ++         R + +     +   A  T 
Sbjct: 559 LNKKIRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCMERLKQLKASRTR 618

Query: 477 PISE 480
              E
Sbjct: 619 NAEE 622


>gi|307636931|gb|ADN79381.1| prolyl tRNA synthetase [Helicobacter pylori 908]
 gi|325995521|gb|ADZ50926.1| Prolyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325997119|gb|ADZ49327.1| Prolyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 577

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + L   
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKN 462
           G+   +    ++ FG +++  +     LA+I G         + IK     K+  ++I+ 
Sbjct: 508 GVDVLLDDRDAR-FGAKMRDFELIGERLALIIGKQTLESKEFECIKRANLEKQTIKDIEL 566

Query: 463 NESWREARVAQ 473
            E   E   ++
Sbjct: 567 EEKILEMLASE 577


>gi|218513382|ref|ZP_03510222.1| prolyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 105

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ +++   IR      G   +  P L+ ++ L +     D   K +  +
Sbjct: 38  GIYSWLPLGKRVLDKVNAIIREEQNRAGAIELSMPTLQSAE-LWQESGRYDAYGKEMLRI 96

Query: 74  QDDDGQWI 81
           +D   + +
Sbjct: 97  KDRQERPM 104


>gi|168181840|ref|ZP_02616504.1| putative prolyl-tRNA synthetase [Clostridium botulinum Bf]
 gi|182674840|gb|EDT86801.1| putative prolyl-tRNA synthetase [Clostridium botulinum Bf]
          Length = 545

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             L            V++T  +  D       +     L   GI   +     +  G + 
Sbjct: 435 DELGIVWPMETSAFKVIVTITNVKDEQQFRVGEKIYSSLVNIGIGTILDDRKERA-GVKF 493

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K AD    P+ I  G        ++IK     ++    I   +   ++
Sbjct: 494 KDADLWGIPIRITVGKN-IKENNVEIKLRNSKEKKEIPIDQLQESIKS 540


>gi|15644866|ref|NP_207036.1| prolyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501038|sp|P56124|SYP_HELPY RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2313329|gb|AAD07305.1| prolyl-tRNA synthetase (proS) [Helicobacter pylori 26695]
          Length = 577

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 89/295 (30%), Gaps = 14/295 (4%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +++    L          L+ VK L        N+ +  + +    + + ++  F+    
Sbjct: 286 IHKDKETLACFFVRGDDNLEEVKALNALNIIGANALELREASQKDLDNVGLIAGFIGPYG 345

Query: 249 EK---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            K   S     E +K       G NE    +  V   G+ +        +          
Sbjct: 346 LKKHVSYIIFDEDLKEGDCLIAGANEKDFHAVGVDLKGFENLVYADIVQVKESDRCPNCQ 405

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +    K     +      +     + +   +   G  I  SRL+ A+   
Sbjct: 406 GALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGI--SRLLSAILEQ 463

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +        T N      V++ +   D           + L   G+ A +    ++ FG 
Sbjct: 464 KSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDAR-FGA 522

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
           +++  +     LA+I G         + IK     K+  ++I+  E   E   ++
Sbjct: 523 KMRDFELIGERLALIIGKQTLESKEFECIKRANLEKQTIKDIELEEKILEMLESE 577


>gi|12045236|ref|NP_073047.1| threonyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351178|sp|P47615|SYT_MYCGE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|3844963|gb|AAC71602.1| threonyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078630|gb|ABY79248.1| threonyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 564

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/345 (11%), Positives = 90/345 (26%), Gaps = 17/345 (4%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +   ++F   T     +   E        Q  + D+         A     M        
Sbjct: 207 HHQQLLFGFNTVCSPVLANIELFKISGHYQHYKEDMFPAIKLDSQAMMLRPMTCPHHCLI 266

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
              KR  Y      R   D IL +    G     ER+  +  +D         +K  +  
Sbjct: 267 FKQKRYSYKKMP-QRFSEDSILHRFEASGGLIGLERVRCMTLLDNHIFCRADQIKSEIKN 325

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
                     K      ++ID+ +               + +       +  +++  + +
Sbjct: 326 AFNL-IQKVNKKFGFIFDRIDLSLHDPKNQS--------KFIDNPGLWRESESQMENVLK 376

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
            +         I  ++     +++    +++ ++    +           +     Y   
Sbjct: 377 DLNIQ--YQKEIGAAAFYGPKIDFQFKTIFKKMITIATIQLDFLLPEKFDL----TYIDK 430

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            +  K   +   G      R I AL    S    +       +    +    L   +   
Sbjct: 431 KNTLKKPVIIHVGIIGTYERFIAALLEKTSGNFPLWLAPVQAVIIPVNIQKHLKAAKKLY 490

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
             L    IR  +     +    +++ A     PL +I G  E   
Sbjct: 491 NKLLKENIRVNLDDNQDR-LAKKVRQAIIEKIPLQLIVGDKEIEN 534


>gi|298736816|ref|YP_003729346.1| prolyl-tRNA synthetase [Helicobacter pylori B8]
 gi|298356010|emb|CBI66882.1| prolyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 577

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKNNDFVLSP 108



 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 88/295 (29%), Gaps = 14/295 (4%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +++    L          L+ VK L        N+ +  + +        ++  F+    
Sbjct: 286 IHKDKETLACFFVRGDDNLEEVKALNALNLLGANALELREASKEDLNHAGLIAGFIGPYG 345

Query: 249 EK---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            K   S     E +K +     G NE    +  V   G+ +        +          
Sbjct: 346 LKKHVSYIIFDEDLKESDCLIVGANEKDFHAVGVDLKGFENLVYADIVQVKESDHCPNCQ 405

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +    K     +      +     + +   +   G  I  SRL+ A+   
Sbjct: 406 GALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGI--SRLLSAILEQ 463

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +        T N      V++ +   D           + L   G+ A +    ++ FG 
Sbjct: 464 KSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDAR-FGA 522

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
           +++  +     LA+I G         + +K     K+  ++I+  E   E   ++
Sbjct: 523 KMRDFELIGERLALIVGKQTLENKEFECVKRANLEKQTIKDIELEEKILEILASE 577


>gi|312867906|ref|ZP_07728110.1| proline--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096310|gb|EFQ54550.1| proline--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 616

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 43/140 (30%), Gaps = 5/140 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  +E  G   +  P L  +D L +     D   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKGIMRQEFEKIGAVEMLAPALLSAD-LWRESGRYDTYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +G    L    + T   + R   +++  +       +       ++   G  R    
Sbjct: 97  KNREGSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQ-PKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMM 150
              D     A     ++   
Sbjct: 156 IMKDGYSFHANYDSLDVTYD 175



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D  SL+      + L   G    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEASLALTNRIEEALVNKGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|210134438|ref|YP_002300877.1| prolyl-tRNA synthetase [Helicobacter pylori P12]
 gi|226701295|sp|B6JKG9|SYP_HELP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|210132406|gb|ACJ07397.1| prolyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 577

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 44.1 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 88/295 (29%), Gaps = 14/295 (4%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS-EQIDIMVSFLSIDL 248
           +++    L          L+ VK L        +    + AN     +  ++  F+    
Sbjct: 286 IHKDKETLACFFVRGDDNLEEVKALNALNIIGANALELREANEEDLNKAGLIAGFIGPYG 345

Query: 249 EK---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            K   S     E +K +     G NE    +  V   G+ +        +          
Sbjct: 346 LKKHVSYIIFDEDLKESDCLIVGANEKDFHAVGVDLKGFENLVYADIVQVKESDRCPNCQ 405

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +    K     +      +     + +   +   G  I  SRL+ A+   
Sbjct: 406 GELKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGI--SRLLSAILEQ 463

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +        T N      V++ +   D           + L   G+ A +    ++ FG 
Sbjct: 464 KSDDLGCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQKGVDALLDDRDAR-FGA 522

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
           +++  +     LA+I G         + IK     K+  ++I+  E   E   ++
Sbjct: 523 KMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEKILEMLASE 577


>gi|163737374|ref|ZP_02144791.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161388900|gb|EDQ13252.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 648

 Score = 46.8 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 71/256 (27%), Gaps = 23/256 (8%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F     + SE    +     +  +   H+    +        G +E   + E   
Sbjct: 392 DDGHIFCAEDQIESETAKFIAFLSKVYADLGFHDWTIKLSTRPEKRIGSDESWDLVEKAL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                +   +       G  Y     +   +AI         Q                 
Sbjct: 452 GDACKAAGYEYELLEGEGAFYGPKLEFTLTDAIGRNWQCGTLQVDPNLPERLDANFIGQD 511

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            S+ +   +           + + ++              V++ ++  D+D         
Sbjct: 512 GSKHRPFMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSDAD--DYVNEVV 569

Query: 398 QMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           + LR AG+RAE  + + K        + G           P+ +  G  E     + ++ 
Sbjct: 570 ETLRAAGVRAEADIRNEKINYKVREHSVGK---------VPVILAVGHREVEERTVSVRR 620

Query: 450 LAKGKELSREIKNNES 465
           L + K+   E  +  +
Sbjct: 621 LGE-KQTKVEALDAVT 635


>gi|332664741|ref|YP_004447529.1| Prolyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333555|gb|AEE50656.1| Prolyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 489

 Score = 46.8 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 65/232 (28%), Gaps = 14/232 (6%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L + +    +         I +   R          EA+
Sbjct: 170 WQEGHTAHATKEEAVEETLKILDIYATFAEEYMAMPVIRGIKTANERFAGAEETYCIEAL 229

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           ++    Q           +RL+  L        
Sbjct: 230 MQDGKALQAGTSHFLGQNFAKAFDVKFLNENNQQEYVWATSWGVSTRLMGGLIMTHSDDD 289

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                       V+I  +   S  + +        L+  GIR +  +      G   K+A
Sbjct: 290 GLVVPPKLAPTQVVIVPIPKPSPVIDEVVHKIMAALKAKGIRVKYDMDMKNRPG--FKFA 347

Query: 425 DR--RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +      P+ +  G  + + G +++      ++  + ++  E + E  + +I
Sbjct: 348 EHEMHGIPVRLAIGERDLANGQVEVARRDTKEKTQQPLEGIEQYIEDLLVEI 399


>gi|303313271|ref|XP_003066647.1| prolyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240106309|gb|EER24502.1| prolyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 603

 Score = 46.8 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 15/101 (14%)

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
              +L  AGIR E+      + G +    + +  PL +  G GE S G +          
Sbjct: 409 LASVLEAAGIRVEIDKREGYSPGWKFNDWELKGIPLRLEFGPGESSGGFVT--------- 459

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                  +      +  + TIPI+EL + V  +L+  + ++
Sbjct: 460 ------TSRRDIPGKEGKSTIPIAELATAVPALLETIQADL 494


>gi|237796966|ref|YP_002864518.1| putative prolyl-tRNA synthetase [Clostridium botulinum Ba4 str.
           657]
 gi|229262943|gb|ACQ53976.1| putative prolyl-tRNA synthetase [Clostridium botulinum Ba4 str.
           657]
          Length = 545

 Score = 46.8 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
             L            V++T  +  D       +     L   GI   +     +  G + 
Sbjct: 435 DELGIVWPMETSAFKVIVTITNVKDEQQFRVGEKIYSSLVNIGIGTILDDRKERA-GVKF 493

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           K AD    P+ I  G        ++IK     ++    I   +   ++
Sbjct: 494 KDADLWGIPIRITVGKN-IKENNVEIKLRNSKEKKEIPIDQLQESIKS 540


>gi|20094665|ref|NP_614512.1| prolyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74580679|sp|Q8TW09|SYP_METKA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19887826|gb|AAM02442.1| Prolyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 485

 Score = 46.8 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 74/234 (31%), Gaps = 33/234 (14%)

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR--- 333
           E V       + + I        E+      E  + F  +    + +  G+V   G+   
Sbjct: 187 EAVEIYSSFFDELGIPYIASVRPEWDKFPGAEYTVAFDTLMPDGRTLQIGTVHMLGQNFA 246

Query: 334 ------YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
                 Y+      +   +   G S  +   ++A+   E       ++ P  +  +    
Sbjct: 247 RTFEVTYETEEGDQEYVYMTCYGISDRVVASMIAIHGDERGLVLPPDVAPYQVVMVPILK 306

Query: 388 DS-----LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
                  L +     +MLR  G+R ++      + G +  Y + +  PL I  G  E   
Sbjct: 307 KGVRRKILERAAEVEEMLREEGVRVKVD-DRDMSPGRKFHYWELKGVPLRIELGARELEE 365

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           G   +                  +R   + + T    EL   V ++L++   E+
Sbjct: 366 GTAVV------------------FRRDELERETYAFEELPDVVPELLEDIAMEL 401



 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G          IR R+++ +R      G + +  P L     L K           V
Sbjct: 40  PVKGMYVWLPYGFEIRQRVVEKLRRKLRETGHEEVLFPTLIPETQLKKESEHIAGFEDEV 99

Query: 71  FSLQDDDG-----QWISLRY 85
           +      G     + ++LR 
Sbjct: 100 Y-WVTHGGLKELDEKLALRP 118


>gi|320036438|gb|EFW18377.1| prolyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 603

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 15/101 (14%)

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
              +L  AGIR E+      + G +    + +  PL +  G GE S G +          
Sbjct: 409 LASVLEAAGIRVEIDKREGYSPGWKFNDWELKGIPLRLEFGPGESSGGFVT--------- 459

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                  +      +  + TIPI+EL + V  +L+  + ++
Sbjct: 460 ------TSRRDIPGKEGKSTIPIAELATAVPALLETIQADL 494


>gi|302206640|gb|ADL10982.1| Glycyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308276883|gb|ADO26782.1| Glycyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 461

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 26/99 (26%), Gaps = 7/99 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
               V +  +          +     LR         +   +S   G + +  D    P 
Sbjct: 364 SPVKVAVLPLSKKDTLTPVAEEVAAKLRKFWN-----VDYDTSGAIGRRYRRQDEIGTPF 418

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +           + +++     +    +   ES+  AR
Sbjct: 419 CVTVDFDTLEDNAVTVRERDTMSQERVALDQLESYLAAR 457


>gi|299066586|emb|CBJ37776.1| threonine tRNA synthetase [Ralstonia solanacearum CMR15]
          Length = 635

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/96 (8%), Positives = 27/96 (28%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   +R      G+  + TP +       +     +   + +F +
Sbjct: 261 GMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDRGLWERS-GHWENYKENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
            + + +  +++        +    +           
Sbjct: 319 TESEKREYAIKPMNCPGHVQIF-NHGLRSYRDLPLR 353



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M          +   Q L+  G RA      ++    +++    +  P  ++ G  
Sbjct: 540 QVVVMSIADAHAEYAESVAQSLQKQGFRA-FADLRNEKITYKIREHSLQKVPYLVVVGDK 598

Query: 439 ERSRGMLQIK 448
           ER    + ++
Sbjct: 599 ERDGNQVAVR 608


>gi|260437797|ref|ZP_05791613.1| proline--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809821|gb|EFF69026.1| proline--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 479

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 44/116 (37%), Gaps = 13/116 (11%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I  M   +  L K     + L  AG+R ++   S KN G +    + R  P+ I  G  +
Sbjct: 297 IPVMQKKAGVLEKAAEVKEKLIKAGLRVKVD-DSDKNPGWKFSEQEMRGIPVRIEMGPRD 355

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK-KILQENKE 494
                  I      ++    I   +           + + E++ T++ ++L+  ++
Sbjct: 356 IEANQAVIVRRDTREKTVVSIDELD-----------VKVKEILDTMQVEMLERARK 400


>gi|159042526|ref|YP_001541778.1| prolyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|259511577|sp|A8MC04|SYP_CALMQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157921361|gb|ABW02788.1| prolyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 481

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 81/258 (31%), Gaps = 31/258 (12%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           + E+    +   A     +    + E V       + + I   I R  ++         +
Sbjct: 155 LREISMFKEAHTAHADRDDAERQVKEAVGIYRRIMDELCIPYLISRRPDWDKFAGAVYTI 214

Query: 312 GFPVMNEKQKPVVFGSVGG---------GGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
            F  +    + +  G+V             +Y G   +    +  + G S  I   ++A+
Sbjct: 215 AFDTIMPDGRTMQIGTVHYLGENFSRVFDVKYLGKDGQMHYIHTTSYGISERIIASMIAV 274

Query: 363 KSLESSTNNIKEMGPVLITTM----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              +          P+ +  +      D   L+  +  +  L  AG+R  +     K  G
Sbjct: 275 NGDDRGLLLPPRYAPIQVVVIPIMYGEDQSVLNYAKGVSGELLNAGVRVHVDDRRDKTPG 334

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +  + + +  P+ +  G  +     + +                   R     +  +  
Sbjct: 335 WKYYHWELKGVPIRLEVGPSDVKDNAVTL------------------TRRDTFEKYAVER 376

Query: 479 SELVSTVKKILQENKEEI 496
           S +V  V+++++  ++ +
Sbjct: 377 SNVVDAVRELMKAIEDNM 394



 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 2/77 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        + IR  +   IR +++  G   +  P+    +   K           V
Sbjct: 35  PVKGAYIWRPYGVAIRRNVEALIRRLHDETGHQEVLFPVFIPYEFFSKESEHIRGFESEV 94

Query: 71  F--SLQDDDGQWISLRY 85
           F  S      + + LR 
Sbjct: 95  FWVSKGTGGEERLVLRP 111


>gi|119191888|ref|XP_001246550.1| hypothetical prolyl-tRNA synthetase [Coccidioides immitis RS]
          Length = 603

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 15/101 (14%)

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
              +L  AGIR E+      + G +    + +  PL +  G GE S G +          
Sbjct: 409 LASVLEAAGIRVEIDKREGYSPGWKFNDWELKGIPLRLEFGPGESSGGFVT--------- 459

Query: 456 LSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                  +      +  + TIPI+EL + V  +L+  + ++
Sbjct: 460 ------TSRRDIPGKEGKSTIPIAELATAVPALLETIQADL 494


>gi|308184043|ref|YP_003928176.1| prolyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308059963|gb|ADO01859.1| prolyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 577

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 87/295 (29%), Gaps = 14/295 (4%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +++    L          L+ VK L        N+ +  + +    +   ++  F+    
Sbjct: 286 IHKDKETLACFFVRGDDNLEEVKALNALNLLGANALELREASQKDLDNAGLIAGFIGPYG 345

Query: 249 EK---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            K   S     E +K       G NE    +  V   G+ +        +          
Sbjct: 346 LKKHVSYIIFDEDLKEGDCLIVGANEKDFHAVGVDLKGFENLVYADIVQVKESDHCPNCQ 405

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +    K     +      +     + +   +   G  I  SRL+ A+   
Sbjct: 406 GALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGI--SRLLSAILEQ 463

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +        T N      V++ +   D           + L   G+   +    ++ FG 
Sbjct: 464 KSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDTLLDDRDAR-FGA 522

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
           +++  +     LA+I G         + IK     K+  ++I+  E   E   ++
Sbjct: 523 KMRDFELIGERLALIIGKQTLENKEFECIKRANLEKQTIKDIELEEKILEMLESE 577


>gi|254778944|ref|YP_003057049.1| prolyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254000855|emb|CAX28787.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA
           synthesis factor) [Helicobacter pylori B38]
          Length = 577

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 2/107 (1%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
            T N      V++ +   D           + L   G+ A +    ++ FG +++  +  
Sbjct: 472 WTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDAR-FGAKMRDFELI 530

Query: 428 NCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
              LA+I G         + IK     K+  ++I+  E   E   ++
Sbjct: 531 GERLALIIGKQTLESKEFECIKRANLEKQTIKDIELEEKILEMLESE 577


>gi|159903050|ref|YP_001550394.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|226701318|sp|A9BED0|SYP_PROM4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|159888226|gb|ABX08440.1| Prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 600

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 42/121 (34%), Gaps = 16/121 (13%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I     +++     D       +   + LR  GI   +     +  G + K AD 
Sbjct: 489 IWPLSISPFEVIIVIANIKDEVQNRLGEDIYKQLRHKGIDVLLDDRDERA-GVKFKDADL 547

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  ++ G           +D + GK    +  +    R  ++ +  I + EL++ + 
Sbjct: 548 IGIPWRVVVG-----------RDSSSGKVELLKRSD----RSVKLIESEIVVKELIAEIS 592

Query: 487 K 487
           +
Sbjct: 593 R 593



 Score = 43.3 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 7/89 (7%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
            +  G         R+  +I   IR      G      P L  SD L K     +    G
Sbjct: 34  RITSGIYAYLPLMWRVIQKINCIIREELNAKGCLEALLPQLHPSD-LWKKTGRWEGYTAG 92

Query: 70  ---VFSLQDDDGQWISLRY---DLTAPLA 92
              +F+L+D  G+ + L     ++   +A
Sbjct: 93  EGIMFNLKDRQGRELGLGPTHEEIITQIA 121


>gi|317177054|dbj|BAJ54843.1| prolyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 577

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENITHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 43.7 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + L   
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLHQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKN 462
           G+ A +    ++ FG +++  +     LA+I G         + IK     K+  ++ + 
Sbjct: 508 GVDALLDDRDAR-FGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTLKDTEL 566

Query: 463 NESWREARVAQ 473
            E   E   ++
Sbjct: 567 EEKILEMLKSE 577


>gi|302672266|ref|YP_003832226.1| prolyl-tRNA synthetase ProS [Butyrivibrio proteoclasticus B316]
 gi|302396739|gb|ADL35644.1| prolyl-tRNA synthetase ProS [Butyrivibrio proteoclasticus B316]
          Length = 477

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 75/250 (30%), Gaps = 20/250 (8%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+        L V ++ +             +   +          EA+
Sbjct: 162 WQEGHTAHATFEEAEERTQQMLNVYADFLENDMAIPVIKGQKTEKEKFAGAEATYTVEAL 221

Query: 311 LGFPVMNEKQKPVVFGSVGGGG---RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +      +      FG         +Y G  ++    N  + G +      ++ +    S
Sbjct: 222 MHDGRALQSATSHNFGDGFAKAFGIQYAGKDNQLHYVNQTSWGLTTRTIGAMIMVHGDNS 281

Query: 368 STNNIKEMGPVLITTMD---HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                 ++ P+ +  +         L       + L  AG R ++   + +  G   K+A
Sbjct: 282 GLVVPPKIAPIQVVVIPIQQKKEGVLEAANKIAESL--AGFRVKVD-STDRTPG--FKFA 336

Query: 425 DR--RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           ++  R  P+ +  G  +   G   +      +++   I    +     + QI     ++ 
Sbjct: 337 EQEMRGIPVRVEIGPKDLEAGKCVLCRRDTREKIECAIDEVPAKMAELLDQI---QKDMF 393

Query: 483 STVKKILQEN 492
           +  K  L+ +
Sbjct: 394 NRAKAHLEAH 403


>gi|119872407|ref|YP_930414.1| glycyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673815|gb|ABL88071.1| glycyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 585

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 2/98 (2%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V I  +   +D +   +   + L   G             G++  Y D    PLA+    
Sbjct: 477 VCILPIVKRADYVEIGRRLMRRLGDEGFTVI--YEDEGTIGSRYAYCDEIGTPLAVTIDE 534

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
                  + I+D    +++  +++   ++       +T
Sbjct: 535 KTPVDETVTIRDRDTKRQVRIKLEKVPTFVAMVKRGMT 572



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFD----PIETPLLEYSDSLGKFLPDEDRPNK 68
           GF D     +++R  I+D  R  +    +      +ETP++   + + K     D    
Sbjct: 28 SGFYDYGPLAVQLRRNIIDKWRRTFVTP-YQDLIIEVETPIIMP-ELVFKASGHLDHFTD 85

Query: 69 GVFS 72
           V +
Sbjct: 86 YVVT 89


>gi|50365293|ref|YP_053718.1| prolyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81827288|sp|Q6F0Y9|SYP_MESFL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50363849|gb|AAT75834.1| prolyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 473

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 46/142 (32%), Gaps = 16/142 (11%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                ++     V +  +    + +   +   + L     R ++   + K+FG ++  A+
Sbjct: 278 GLVLPSMVSPVQVRLIQIKETDEVIKVTEDIKEAL-KNKYRVDID-KTDKSFGFKISEAE 335

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA--------------RV 471
            +  PL I  G  +     + I      +++   +    +  +               + 
Sbjct: 336 IKGIPLRIEIGPRDLENNQVTISRRDTREKIQVNVNEVTNIVDQMIKEYDANLYAKALKN 395

Query: 472 AQITIPISELVSTVKKILQENK 493
            +     +  +   K IL +N+
Sbjct: 396 REERTSRANSIEEYKNILAQNQ 417


>gi|32267225|ref|NP_861257.1| prolyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81835913|sp|Q7VFF0|SYP_HELHP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|32263278|gb|AAP78323.1| prolyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 588

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 6/76 (7%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G  +      ++ +++   ++   +  G   I    +  ++ L +     ++  + 
Sbjct: 34  QIGSGIYNFLPLGKKLLDKVRFIVKEEMDKSGAQEILMGFVTPAE-LWRESGRYEQYGRE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +    D       L  
Sbjct: 93  LLRFVDRKENEFVLGP 108


>gi|328907189|gb|EGG26955.1| glycyl-tRNA synthetase [Propionibacterium sp. P08]
          Length = 504

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 29/97 (29%), Gaps = 7/97 (7%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           +  +  +SD   K +     LR         +    ++  G + +  D    P  +    
Sbjct: 413 VLPLSRNSDLSPKARDLAAQLRQWWN-----VDFDDAQAIGKRYRRQDEIGTPFCVTVDF 467

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                  + ++D     +    +   E +   R+ + 
Sbjct: 468 DTLDDNAVTVRDRDTMSQERIALDKVEDYLAERLPRF 504


>gi|320583490|gb|EFW97703.1| Mitochondrial threonyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 427

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/386 (9%), Positives = 90/386 (23%), Gaps = 11/386 (2%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
           +   +   I      +      ++          + +   +  G     A+    +    
Sbjct: 37  FFLPHGTRIFNRLVQFMKIQQEKHGFTEVISPLMYKKDLWETSGHWDNYAEDMFRVESNS 96

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKL 213
           +   +        +      ++ G   +       +L++   + R        GL  V+ 
Sbjct: 97  SSNKLEAVYGLKPMNCPGHCVIFGRFARSHHELPIRLSDWSSLHRNEPSGALTGLTRVRR 156

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
              +           GA +      I + +     +K    L    +  I   + + E  
Sbjct: 157 FHQDDGHIFCSKSQVGAEIGKTLQLIRLCYSVFGFQKYRMMLSTRPETHIGTVEEWEEAE 216

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
              +             I              +     G        +            
Sbjct: 217 NELQKALDRHAGPENWAIRDKDGAFYGPKIDVLVTDRTGKEHQAATVQLDFQLPQRFQLE 276

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           Y G         V    F      + + +   E            +I  ++      S+ 
Sbjct: 277 YQGEHGPETPIMVHRAVFGSVERFMALLMDEYEGKWPFWLSPRQAVIIPVNETHLEYSRG 336

Query: 394 QM----------YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
                           LR      ++    ++  G + K A ++     I+ G  E   G
Sbjct: 337 IQEKLGGQQDLDVACSLRDVNYYVDVD-SRAETVGLRTKDAIQKGYNYIILVGDREVQSG 395

Query: 444 MLQIKDLAKGKELSREIKNNESWREA 469
            + ++     K  + +I   ++    
Sbjct: 396 KIAVRSRDNRKVQTMDIDELQTLFAD 421



 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 14/124 (11%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           + A  P G         RI NR++  ++   E +GF  + +PL+   D L +     D  
Sbjct: 28  IDASSP-GSVFFLPHGTRIFNRLVQFMKIQQEKHGFTEVISPLMYKKD-LWETSGHWDNY 85

Query: 67  NKGVFSLQDDD-----GQWISLRYDLTAP----LARYVAENFDTIVFPCRTYRIGPVFRN 117
            + +F ++ +           L+            R+   +      P R      + RN
Sbjct: 86  AEDMFRVESNSSSNKLEAVYGLKPMNCPGHCVIFGRFARSH---HELPIRLSDWSSLHRN 142

Query: 118 EKHG 121
           E  G
Sbjct: 143 EPSG 146


>gi|237752688|ref|ZP_04583168.1| prolyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376177|gb|EEO26268.1| prolyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 582

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 27/80 (33%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I   ++   +N G + +     TP      +L +     +R
Sbjct: 34  QIGSGIYNFLPLGKRVLDKIKSIVKEEMDNAGANEVTLGFVTPA-----NLWQKSGRFER 88

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +    D       L  
Sbjct: 89  YGKELLRFNDRKDNAFVLGP 108


>gi|270283990|ref|ZP_05965365.2| glycine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277876|gb|EFA23730.1| glycine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 544

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 32/102 (31%), Gaps = 2/102 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  S        LR       +    S   G + +  D    PL I      
Sbjct: 423 VLPLSKKPELQSVAHNLAADLRLNDW--MVDYDESGAIGRRYRRQDEIGTPLCITVDFDT 480

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                + I++    ++    + N  ++  AR+    + + ++
Sbjct: 481 LEDQAVTIRERDTMQQERVALDNVAAYVRARIEDKRVRVPQV 522


>gi|125775071|ref|XP_001358787.1| GA18849 [Drosophila pseudoobscura pseudoobscura]
 gi|54638528|gb|EAL27930.1| GA18849 [Drosophila pseudoobscura pseudoobscura]
          Length = 1725

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 66/203 (32%), Gaps = 28/203 (13%)

Query: 297  RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
              L      ++E +   P   +K             +Y    S             +   
Sbjct: 1454 HHLGQNFSKMFEIVYEDPETQQK-------------KYVFQNSWGITTRTIGVMIMVHAD 1500

Query: 357  RLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               + L    +    I     + + T D + +  L   +   Q L  AG+R E     + 
Sbjct: 1501 NQGLVLPPNVACIQAIVVPCGITVNTTDEERAQLLDACKKLEQTLVGAGVRCEGDYRDNY 1560

Query: 416  NFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREARVAQI 474
            + G +  + + +  PL +  G  +      + ++    G++++  + + E          
Sbjct: 1561 SPGWKFNHWELKGVPLRLEVGPKDLKAQQLVAVR-RDTGEKITLPLADVEK--------- 1610

Query: 475  TIPISELVSTVK-KILQENKEEI 496
               IS L+ T+   +L + + ++
Sbjct: 1611 --KISALLETIHGSMLAKAQADL 1631


>gi|86141210|ref|ZP_01059756.1| prolyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831769|gb|EAQ50224.1| prolyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 490

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 71/264 (26%), Gaps = 33/264 (12%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E +       + + +       +          +      R    
Sbjct: 166 EFLWQEGHTAHATKDEAIAEAEQMMRVYADFAEHFMALPVVRGTKTESE------RFAGA 219

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G            ++  GQ           +RL+ A
Sbjct: 220 LETYCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFATKEGGQEHVWATSWGVSTRLMGA 279

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA----GIRAEMFLG 412
           L                    V+I  +    + L       + L+      GI  +    
Sbjct: 280 LVMTHSDDNGLVLPPKLAPIQVVIVPIYKGEEQLDSISQVAKELKRELQLLGISVKFDDR 339

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +   G +    + +  PL I  G  +  +  +++                   R   + 
Sbjct: 340 DTHKPGWKFNEYELKGVPLRIAIGPRDLEKRTVEL------------------ARRDTLT 381

Query: 473 QITIPISELVSTVKKILQENKEEI 496
           + T+   ++VS V+ +L E ++ +
Sbjct: 382 KETVSKDDIVSRVQDLLVEMQKSL 405


>gi|300858940|ref|YP_003783923.1| glycyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686394|gb|ADK29316.1| glycyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302331189|gb|ADL21383.1| Glycyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 473

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 26/99 (26%), Gaps = 7/99 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
               V +  +          +     LR         +   +S   G + +  D    P 
Sbjct: 376 SPVKVAVLPLSKKDTLTPVAEEVAAKLRKFWN-----VDYDTSGAIGRRYRRQDEIGTPF 430

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +           + +++     +    +   ES+  AR
Sbjct: 431 CVTVDFDTLEDNAVTVRERDTMSQERVALDQLESYLAAR 469


>gi|310829146|ref|YP_003961503.1| hypothetical protein ELI_3581 [Eubacterium limosum KIST612]
 gi|308740880|gb|ADO38540.1| hypothetical protein ELI_3581 [Eubacterium limosum KIST612]
          Length = 483

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 1/106 (0%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              I     V+I    H    L K      +L  A  R E+    S + G +    + + 
Sbjct: 287 PPRIAPTQLVIIPVAQHKEGVLDKAYELKDIL-GAEFRVELDDNDSNSPGWKFNQWEMKG 345

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            P+ +  G  +   G   +     G+++   + +        +A+I
Sbjct: 346 VPIRLEIGPRDIENGQCVLARRDTGEKVQVALDDITEAVRNLLAEI 391


>gi|302855151|ref|XP_002959075.1| hypothetical protein VOLCADRAFT_70347 [Volvox carteri f.
           nagariensis]
 gi|300255572|gb|EFJ39869.1| hypothetical protein VOLCADRAFT_70347 [Volvox carteri f.
           nagariensis]
          Length = 563

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +  +       +     ++ AGIR E+      + G  ++ A++   P+  + G  
Sbjct: 470 QVRLLTVNDTVAEYARDVAAQMKRAGIRVEVV--GEASMGKLIRNAEKAKIPVICVVGVK 527

Query: 439 ERSRGMLQIK 448
           E     L ++
Sbjct: 528 EADGNSLSVR 537



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   +R+ I    + ++ + G+  + +P +  +D L +     +   + ++     +
Sbjct: 213 WHPKGALVRHLIETFWKELHLSRGYQLVYSPHIAKAD-LWRTSGHLEFYKENMYEQMKVE 271

Query: 78  GQWISLRYDLTA 89
            +   LR     
Sbjct: 272 DESYQLRPMNCP 283


>gi|269795644|ref|YP_003315099.1| prolyl-tRNA synthetase, family II [Sanguibacter keddieii DSM 10542]
 gi|269097829|gb|ACZ22265.1| prolyl-tRNA synthetase, family II [Sanguibacter keddieii DSM 10542]
          Length = 591

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 20/72 (27%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  ++   +R   +  G   +  P L   +               +F L
Sbjct: 40  GIYTWLPLGLRVLAKVEAVVREEMQAAGAQEVHFPALLPREPYEA-TGRWTEYGPNLFRL 98

Query: 74  QDDDGQWISLRY 85
           +D       L  
Sbjct: 99  KDRRDNDYLLAP 110



 Score = 39.8 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 13/116 (11%), Positives = 29/116 (25%), Gaps = 27/116 (23%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                +         V +     D    +  +   Q L     R E+           +K
Sbjct: 481 DEKGLAWPAHVAPAHVHVVATGKDPAVFAAAETIAQELSAQ--RVEVLYDDRPKVSPGVK 538

Query: 423 YADRRNCPLAIIQGTGE-------------RSRGMLQIKDLAKGKELSREIKNNES 465
           +AD             E              + G+++++    G+ +S  +     
Sbjct: 539 FADA------------ELLGVPLVVVVGRGLADGVVEVRPRVGGEAVSVPVAEAAQ 582


>gi|226307195|ref|YP_002767155.1| glycyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229493158|ref|ZP_04386950.1| glycyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|226186312|dbj|BAH34416.1| glycyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229319889|gb|EEN85718.1| glycyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 463

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 28/91 (30%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      E     +   G + +  D    P  I      
Sbjct: 372 VLPLSRNADLTPKAKDLAAQLR-QNWNVEFD--DAGAIGRRYRRQDEIGTPFCITVDFDT 428

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++     +    +   ES+  AR
Sbjct: 429 LEDQAVTVRERDSMAQERVALDQVESYLAAR 459


>gi|314928065|gb|EFS91896.1| glycyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
          Length = 504

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 29/97 (29%), Gaps = 7/97 (7%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           +  +  +SD   K +     LR         +    ++  G + +  D    P  +    
Sbjct: 413 VLPLSRNSDLSPKARDLAAQLRQWWN-----VDFDDAQAIGKRYRRQDEIGTPFCVTVDF 467

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                  + ++D     +    +   E +   R+ + 
Sbjct: 468 DTLDDNAVTVRDRDTMSQERIALDKVEDYLAERLPRF 504


>gi|242024338|ref|XP_002432585.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus
           corporis]
 gi|212518045|gb|EEB19847.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus
           corporis]
          Length = 717

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 7/102 (6%), Positives = 25/102 (24%), Gaps = 2/102 (1%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                      + +  +S              ++  +          +     +  AG  
Sbjct: 584 HRAILGSVERMIAILTESYGGKWPFWLSPRQSIVIPVGLP--FYEYAKKVKDDIFNAGFS 641

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +           +++ A         + G  E++ G + ++
Sbjct: 642 CDFDDDEGDTMNKKIRNAQLAQYNFIFVVGEKEKNAGTVNVR 683



 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ IR+ Y   GF  + TP + Y+  L +         + +FS +  +
Sbjct: 340 FYPKGAFIYNTLVEFIRSEYRKRGFQEVITPNI-YNVKLWETSGHWQHYAENMFSFE-LE 397

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 398 KETYALKPMNCPG 410


>gi|196012975|ref|XP_002116349.1| hypothetical protein TRIADDRAFT_50865 [Trichoplax adhaerens]
 gi|190580940|gb|EDV21019.1| hypothetical protein TRIADDRAFT_50865 [Trichoplax adhaerens]
          Length = 680

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 44/358 (12%), Positives = 98/358 (27%), Gaps = 32/358 (8%)

Query: 124 RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIG 183
               +     D      E     +  M       +   R      +  R    G+L +  
Sbjct: 344 TSGHWQHYKDDMFTFDVEKDQFGLKPMNCPGHCVMFSHRPRSWRELPLRYAEFGVLHRNE 403

Query: 184 LHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
           L G      R+   +  D         VK  + +G  D                  +  F
Sbjct: 404 LSGTLSGLTRVRRFQQDDAHIFCRDDQVKDEI-KGCLDFLKYIYDTLGF------QLKLF 456

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY---NSNRIKISSTIVRGLE 300
           LS   ++ M E+    +      +  +E  +   L  K G        I++   + R  +
Sbjct: 457 LSTRPDEFMGEIATWDRAEQQLRESLDEFGLKWGLKEKDGAFYGPKIDIQVLDALRRPHQ 516

Query: 301 YYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
             T    ++    F +                  Y G       + V      +G    +
Sbjct: 517 CATIQLDFQLPTRFNLT-----------------YVGKNGDDTLRPVIIHRAILGSVERM 559

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +A+     +      + P     +   +            L +AG   ++ L        
Sbjct: 560 IAVLCENFAGKWPFWLSPRQAMVIPVAAKFDEYALQVRDQLHSAGFYVDVDLAPGDTMNK 619

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK---GKELSRE-IKNNESWREARVAQ 473
           +++ A       +++ G  E     + ++       G++   + I+  E   +++  +
Sbjct: 620 KVRNAQLAQYNFSMVVGQKECENKSVNVRSRNNQVYGEQTIVKVIERFEELNKSKADE 677



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/223 (10%), Positives = 58/223 (26%), Gaps = 15/223 (6%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I   ++  +R+ Y   GF  + +P + YS  L             +F+  D +
Sbjct: 304 FLPRGAHIYGILMQLMRDQYRKRGFHEVLSPNI-YSSKLWMTSGHWQHYKDDMFTF-DVE 361

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                L+                              +R        F    + ++    
Sbjct: 362 KDQFGLKPMNCPG-------------HCVMFSHRPRSWRELPLRYAEFGVLHRNELSGTL 408

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           S                     +K          + I D +  ++ L    + +E +  +
Sbjct: 409 SGLTRVRRFQQDDAHIFCRDDQVKDEIKGCLDFLKYIYDTLGFQLKLFLSTRPDEFMGEI 468

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
              D+ ++   + +     +           G  +  + +D +
Sbjct: 469 ATWDRAEQQLRESLDEFGLKWGLKEKDGAFYGPKIDIQVLDAL 511


>gi|118474251|ref|YP_891864.1| prolyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|152016592|sp|A0RNT1|SYP_CAMFF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|118413477|gb|ABK81897.1| prolyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 567

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 34/104 (32%), Gaps = 4/104 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
             A++  G  +      R+  ++ + +R+  +  G + +    +   + L K      + 
Sbjct: 31  FVAQIGSGLYNFLPLGKRVLRKVENIVRDEMDKAGANEVALSFVVPGE-LWKQSRRYFKF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
            K +  L+D       L     +    L R    ++  +     
Sbjct: 90  GKELLRLKDRKDNDFLLAPTHEESIVDLVRDKVTSYKQLPLHLY 133



 Score = 37.5 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 83/273 (30%), Gaps = 28/273 (10%)

Query: 220 TDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELV 279
           +D S +    A L       +    +ID       +   ++       G NE    +  V
Sbjct: 320 SDASEEEVIAAGLVPGYCGPVGLHENIDF-----YIDNELENEKEMICGANEKDYHAIGV 374

Query: 280 RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD--GL 337
               +N +R K  + +  G +   G V     G  V +  Q  V +    G    D  G 
Sbjct: 375 NIINFNKDRFKDLAEVKAGDKALDGGVLSVTKGIEVGHIFQLGVRYSETMGATFLDENGK 434

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD-HDSDSLSKYQMY 396
              F           +    +  +                V I   +  D++ +      
Sbjct: 435 SKPFFMGCYGIGVSRLVAVMVEASHDEKGCIWKKECAPFMVHIIVSNIKDTEQMQFALNL 494

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L ++G+   +   + + FG ++   +    P  ++ G               KG + 
Sbjct: 495 ESNLESSGVEVLLDDRNER-FGVKMADFELIGVPFGVVVG---------------KGLQN 538

Query: 457 SREIKNNESWREARVAQITIPISELVSTVKKIL 489
                  E  +   + ++ +   E++  +K+I+
Sbjct: 539 ----AEVEFIKRDGLEKVKVSSDEILGKLKEII 567


>gi|88856273|ref|ZP_01130933.1| threonyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88814592|gb|EAR24454.1| threonyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 653

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 42/121 (34%), Gaps = 19/121 (15%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +                L+  G+RAE+   S +    +++   +   P  +
Sbjct: 551 WLSPVQVVGIPVAEAYEEYLGGVVDQLKALGVRAELDASSER-MQKKIRTHTKSKIPFQL 609

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
           I G  +++ G +  +    G + +                  IPI++ ++ +   +    
Sbjct: 610 IAGEQDQAAGSISFR-FRDGSQENG-----------------IPIADAIARITDAISTRA 651

Query: 494 E 494
           +
Sbjct: 652 Q 652


>gi|308068694|ref|YP_003870299.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305857973|gb|ADM69761.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 482

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 3/119 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           ++  V I         +++       L+ AG+R +M   S  + G +    + R  P+ +
Sbjct: 293 QVIMVPIGPPKKRDAVIARADELFAELKQAGVRVKMDDRSDVSPGWKFNEYEMRGVPVRM 352

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQEN 492
             G  +   G+  +     G++   +  N      A +AQ+     E+    K  ++EN
Sbjct: 353 EIGPRDMENGVCVLVSRISGEKKIVQQDNLVEEVHAMLAQV---QQEMFDRAKNFMEEN 408


>gi|297850190|ref|XP_002892976.1| hypothetical protein ARALYDRAFT_472010 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338818|gb|EFH69235.1| hypothetical protein ARALYDRAFT_472010 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 458

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 74/259 (28%), Gaps = 28/259 (10%)

Query: 235 EQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
           E++  ++ F+  D    +      +K +   +K   +L    +  +      +       
Sbjct: 214 EEVKGVLDFI--DYVYKIFGFTYELKLSTPEKKYIGDLETWDKAEKDLEKALDNFGKPWV 271

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQK-----PVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
           I +G   + G   +  +   +  + Q           +            + +   +   
Sbjct: 272 INKGDGAFYGPKIDITVSDAMKRKFQCATLQLDFQLPACFKLKYITKKNEKERPVMIHRA 331

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                     + L+  +            ++ ++  D    S  +   + ++ AG   ++
Sbjct: 332 VLGSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSED--YSSYAKQVQKQIQEAGYYVDI 389

Query: 410 FLGSSKNFGNQLKYADRRNCPL--AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
              S ++     K AD R  P    ++ G  E + G + ++                   
Sbjct: 390 D-ESDRSICK--KVADARAAPYNYILVVGQKEATTGQVTVR--------------LREDP 432

Query: 468 EARVAQITIPISELVSTVK 486
             R     + I  L+   K
Sbjct: 433 AGRKDLPEMSIDSLLDEFK 451


>gi|154484526|ref|ZP_02026974.1| hypothetical protein EUBVEN_02240 [Eubacterium ventriosum ATCC
           27560]
 gi|149734374|gb|EDM50291.1| hypothetical protein EUBVEN_02240 [Eubacterium ventriosum ATCC
           27560]
          Length = 465

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 32/103 (31%), Gaps = 3/103 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV I  +          +     L +     E     +   G + +  D    
Sbjct: 365 HFHPALAPVKIGVLPLSKKLNEGAEKVFAEL-SKYYNCEFDDRGA--IGKRYRRQDEIGT 421

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P  +         G + ++D    ++   +I++ + + E +  
Sbjct: 422 PFCVTYDFDSEEDGAVTVRDRDTMEQERIKIEDLKEYFEQKFE 464


>gi|17546296|ref|NP_519698.1| threonyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|22654118|sp|Q8XZ29|SYT_RALSO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|17428593|emb|CAD15279.1| probable threonyl-trna synthetase (threonine--trna ligase) protein
           [Ralstonia solanacearum GMI1000]
          Length = 635

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/96 (8%), Positives = 27/96 (28%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   +R      G+  + TP +       +     +   + +F +
Sbjct: 261 GMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDRGLWERS-GHWENYKENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
            + + +  +++        +    +           
Sbjct: 319 TESEKREYAIKPMNCPGHVQIF-NHGLRSYRDLPLR 353



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M          +   Q L+  G RA   L  ++    +++    +  P  ++ G  
Sbjct: 540 QVVIMSIADAHAEYAESVAQSLQKQGFRASADL-RNEKITYKIREHSLQKVPYLVVVGDK 598

Query: 439 ERSRGMLQIK 448
           ER    + ++
Sbjct: 599 ERDGNQVAVR 608


>gi|311744086|ref|ZP_07717892.1| glycyl-tRNA synthetase beta subunit [Aeromicrobium marinum DSM
           15272]
 gi|311313216|gb|EFQ83127.1| glycyl-tRNA synthetase beta subunit [Aeromicrobium marinum DSM
           15272]
          Length = 462

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 26/96 (27%), Gaps = 3/96 (3%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              V +  +  +       +     LR  G    +    S   G + +  D    P  + 
Sbjct: 366 PCKVAVLPLSRNEQLSPAARSLATELR--GYW-NVDFDDSAAIGKRYRRQDEIGTPFCVT 422

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                     + I++    ++    +     W  AR
Sbjct: 423 VDFDTLDDQAVTIRERDSMQQERVALTQVREWLAAR 458


>gi|300023294|ref|YP_003755905.1| threonyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525115|gb|ADJ23584.1| threonyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 650

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/368 (11%), Positives = 93/368 (25%), Gaps = 15/368 (4%)

Query: 100 DTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV-DNVGSSAETADAEMCMMMADTLEAV 158
                     R       E+       +    ++  +  +  E     +           
Sbjct: 275 LFQTLIAYMRRQQQRAGYEEVNSPDMMEKHFWELSGHWENYGENMFTTVLPDERVFCCKP 334

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
                   I  N  K    +  +I   G     E    L  + ++  F      + L E 
Sbjct: 335 MNCPGHVQIYKNGLKSYRDLPYRIAEFGKVHRYEPSGALHGMLRVRHFTQDDAHIFLTED 394

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL-VKGTIAGEKGFNELVVISE 277
           +            L+     I   F   ++   +    E  V      +K    L  + +
Sbjct: 395 QIMEECLKINDLMLS-----IYKDFGFEEIVIKLSTRPEKRVGADELWDKAEKALGDVLD 449

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
            V++      + +I            G   E +L   +  + Q           GR    
Sbjct: 450 EVKRRSNGLIKTEIQPGEGAFY----GPKLEYVLKDAIGRDWQCGTTQVDFNLAGRLGAF 505

Query: 338 VSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                 +            G       +     + +    + P+ I      SD+     
Sbjct: 506 YIDEHSEKKTPVMVHRAMFGSLERFTGILIENFAGHFPLWLAPLQIVVAPIVSDANDYAN 565

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              Q  +  G+R E  L  ++    +++       P+ ++ G  E     + ++ L    
Sbjct: 566 EVAQKAKALGLRVETDL-RNEKINYKVREHSLAKVPVLLVVGKREAEERKVSVRRLGSQD 624

Query: 455 ELSREIKN 462
           +    + +
Sbjct: 625 QTVMSLDD 632



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 61/201 (30%), Gaps = 11/201 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETP-LLEYSDSLGKFLPDEDRPNKGVFS 72
           G      K   +   ++  +R   +  G++ + +P ++E      +     +   + +F+
Sbjct: 264 GSVFWHAKGWTLFQTLIAYMRRQQQRAGYEEVNSPDMMEKH--FWELSGHWENYGENMFT 321

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
               D +    +             +        ++YR  P    E     R+       
Sbjct: 322 TVLPDERVFCCKPMNCPG-------HVQIYKNGLKSYRDLPYRIAEFGKVHRYEPSGALH 374

Query: 133 VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNE 192
              +     T D     +  D +    +K ND  + I      + I+ K+    + ++  
Sbjct: 375 -GMLRVRHFTQDDAHIFLTEDQIMEECLKINDLMLSIYKDFGFEEIVIKLSTRPEKRVGA 433

Query: 193 RLIVLRAIDKLDKFGLQGVKL 213
             +  +A   L     +  + 
Sbjct: 434 DELWDKAEKALGDVLDEVKRR 454


>gi|83748297|ref|ZP_00945322.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83725029|gb|EAP72182.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 635

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/96 (9%), Positives = 28/96 (29%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   +R      G+  + TP +    +L +         + +F +
Sbjct: 261 GMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDR-TLWEHSGHWQNYKENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
            + + +  +++        +    +           
Sbjct: 319 TESEKREYAIKPMNCPGHVQIF-NHGLRSYRDLPLR 353



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M          +   Q L+  G RA   L  ++    +++    +  P  ++ G  
Sbjct: 540 QVVVMSIADAHAEYAETVAQSLQKQGFRASADL-RNEKITYKIREHSLQKVPYLVVVGDK 598

Query: 439 ERSRGMLQIK 448
           ER    + ++
Sbjct: 599 ERDGNQVAVR 608


>gi|300703878|ref|YP_003745480.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299071541|emb|CBJ42865.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957]
          Length = 635

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/96 (9%), Positives = 28/96 (29%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   +R      G+  + TP +    +L +         + +F +
Sbjct: 261 GMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDR-TLWEHSGHWQNYKENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
            + + +  +++        +    +           
Sbjct: 319 TESEKREYAIKPMNCPGHVQIF-NHGLRSYRDLPLR 353



 Score = 37.9 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M          Q   Q L+  G RA   L  ++    +++    +  P  ++ G  
Sbjct: 540 QVVVMSIADAHAEYVQTVAQSLQKQGFRASADL-RNEKITYKIREHSLQKVPYLVVVGDK 598

Query: 439 ERSRGMLQIK 448
           ER    + ++
Sbjct: 599 ERDGNQVAVR 608


>gi|323344340|ref|ZP_08084565.1| glycyl-tRNA synthetase beta subunit [Prevotella oralis ATCC 33269]
 gi|323094467|gb|EFZ37043.1| glycyl-tRNA synthetase beta subunit [Prevotella oralis ATCC 33269]
          Length = 513

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/239 (8%), Positives = 54/239 (22%), Gaps = 27/239 (11%)

Query: 267 KGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP----VMNEKQKP 322
           + + E  +        G ++ R      +       T   ++   GF     + +     
Sbjct: 283 ETWKETRMKWHQALGFGADNYRFHDHEKLAHYANAATDIEFKMPFGFKEVEGIHSRTDFD 342

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVP-----------ATGFSIGISRLIVALKSLE----S 367
           +       G +             P                +  +     L + E     
Sbjct: 343 LSQHEKFSGRQIKYFDPETNESYTPYDIETSIGVDRMFLSVMCHAFTEETLDNGESRVVL 402

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                       +  +        K +     L               + G + +  D  
Sbjct: 403 KLPEALAPVKCAVLPLVKKDGLPEKAREIVDEL---KFHFNTHYEEKDSIGKRYRRQDAI 459

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
             P  +       +   + ++     ++   +I       E R     + I+ L+  ++
Sbjct: 460 GTPFCVTVDHDTLNDNKVTLRFRDSMEQERVDISQLRGIIEDR-----VSITSLLKKLQ 513


>gi|295109529|emb|CBL23482.1| prolyl-tRNA synthetase, family I [Ruminococcus obeum A2-162]
          Length = 477

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 23/130 (17%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR-- 426
              I     V+I         L K       L+ AGIR ++   + ++ G   K+A++  
Sbjct: 284 PPRIAPTQAVIIPIQQRKEGVLEKADELFAALKAAGIRVKVD-DTDRSPG--FKFAEQEM 340

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
           R  P+ I  G  +   G   I      ++                    +   EL S V+
Sbjct: 341 RGIPVRIECGPKDIENGQAVICRRDTREK------------------YVVSFDELASKVQ 382

Query: 487 KILQENKEEI 496
           ++L   ++E+
Sbjct: 383 EVLDLMQKEM 392


>gi|255034032|ref|YP_003084653.1| prolyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254946788|gb|ACT91488.1| prolyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 491

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/259 (12%), Positives = 75/259 (28%), Gaps = 39/259 (15%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        ++   E    L V ++   +         + +   R          EA+
Sbjct: 170 WQEGHTAHATAQEAIAETKQMLEVYAQFAEEWMAVPVIKGVKTANERFAGAEDTYCIEAM 229

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G             +    +          +RL+ AL        
Sbjct: 230 MQDGKALQAGTSHFLGQNFANAFDVKFQDKEGKLDYVWGTSWGVSTRLMGALIMAHSDDA 289

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  + + L+    K    T+ L+  GI  +     +   G   
Sbjct: 290 GLVLPPKLAPIQVVIVPIYRNDEQLAQISEKVAEITKDLKKLGISVKYDSSDNAKPG--F 347

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIP 477
           K+A+   +  P+ +  G  +   G +++  +D    +                    T+ 
Sbjct: 348 KFAEYELKGVPVRLAMGGRDLENGTVEVARRDTKTKE--------------------TVS 387

Query: 478 ISELVSTVKKILQENKEEI 496
           ++ + + V+ +L + +E I
Sbjct: 388 VAGIAAYVQNLLNDIQESI 406


>gi|145631389|ref|ZP_01787160.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983048|gb|EDJ90552.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 643

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 99/366 (27%), Gaps = 8/366 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +               AD +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E    +    N ++       G  
Sbjct: 402 KMVYDIYSTFGFTNIAVKLSTRPENRIGSDEMWDRAEAGLAAALAHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   V       G      V+    +  P       +G    
Sbjct: 462 YGPKIEF-ALRDCLGREWQCGTVQLDFALPGRLDATYVAEDNSRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     ++         Q   + L  AG+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVINITDSQSDYVQQVVKTLSDAGLRVKADL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++     K         E + E    Q+    
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFAEILKNQVRSRE 636

Query: 479 SELVST 484
             L++ 
Sbjct: 637 LTLLNE 642



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|16552114|dbj|BAB71241.1| unnamed protein product [Homo sapiens]
          Length = 707

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 34/116 (29%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 558 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 617

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +      G  A++ L  S     +++ A        ++ G  E+    + ++
Sbjct: 618 ALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVR 673



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 329 FLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 387

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 388 D-TFALKPMNCPGHCLMFAHR 407


>gi|292493207|ref|YP_003528646.1| threonyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291581802|gb|ADE16259.1| threonyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 644

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RIR  I D  R  +   G++ + TP + +   L +     D   + ++  
Sbjct: 262 GLVFWHPMGARIRQVIEDFWRERHRAAGYETLYTPHIAH-QQLWQTSGHTDFYRESMYQP 320

Query: 74  QDDDGQWISLRYDLTA 89
            ++D Q   L+     
Sbjct: 321 MEEDHQLYQLKPMNCP 336



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 1/101 (0%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +  M+             + L+  G R+ + L  ++  G +++    R  P 
Sbjct: 535 PPWLAPVQVAVMNITDRQAEYACQVEETLKNKGFRSLLDL-RNEKIGFKIREHTLRRVPY 593

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            ++ G  E     + ++        +  +       +A +A
Sbjct: 594 LLVIGDREVENQTVAVRTRYSKDLGAMSLDAFIERLDADIA 634


>gi|313127085|ref|YP_004037355.1| prolyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293450|gb|ADQ67910.1| prolyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 488

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 56/217 (25%), Gaps = 8/217 (3%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           ++    L     +                  +     T    EA++      +       
Sbjct: 179 DETMTRLDQYESVYEDLLAIPVLRGAKPEHDKFPGANTTTTVEALMPDGKSVQGATSHDL 238

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLI 380
           G+              +   V  T       R + AL             +      V+I
Sbjct: 239 GTSFAEAFDLTYTDEDEESQVAHTTSWGLSWRALGALIMTHSDDQGLVLPHTVAPEQVVI 298

Query: 381 TTM---DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +   D     L   +  ++ L  AGIR E+     +N G +    + +  P+    G 
Sbjct: 299 VPIWQADTQEKVLEYAESISEELEDAGIRVELDDRDERNPGFKFNEWELKGVPVRFEIGP 358

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            E    ++ +     G+      ++          ++
Sbjct: 359 NEVDDDVVTVVHRPDGETKEVAREDIAETVREEFDEV 395


>gi|99081562|ref|YP_613716.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp.
           TM1040]
 gi|123077585|sp|Q1GFW2|SYT_SILST RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|99037842|gb|ABF64454.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp.
           TM1040]
          Length = 648

 Score = 46.8 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 70/263 (26%), Gaps = 23/263 (8%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F     +TSE    +     +  +         +        G +E     E   
Sbjct: 392 DDGHIFCTEDQITSETAKFIAFLSKVYADLGFDNWTIKLSTRPEQRIGSDETWDNMEQAL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                +           G  Y     +   +AI         Q                 
Sbjct: 452 GDACKAAGYDYEILEGEGAFYGPKLEFTLTDAIGRNWQCGTLQVDANLPERLEASFIGQD 511

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            S+ +   +           + + ++              V++ ++  ++D         
Sbjct: 512 GSKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSEAD--DYVNEVV 569

Query: 398 QMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           + LR AG+RAE    + K        + G           P+ +  G  E     + ++ 
Sbjct: 570 ETLRAAGVRAEADTRNEKINYKVREHSVGK---------VPVILAVGHREVEERTVSVRR 620

Query: 450 LAKGKELSREIKNNESWREARVA 472
           L + K+   E   N +   A+ A
Sbjct: 621 LGE-KQTKVESLTNVTEELAKAA 642


>gi|221122393|ref|XP_002164939.1| PREDICTED: similar to threonyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 801

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   I N ++  IR+ Y N GF  + TP + +S  L +           +FS 
Sbjct: 336 GSAFFLPKGAFIYNTLVSFIRSEYNNRGFQEVITPNM-FSTKLWEQSGHWQHYATNMFSF 394

Query: 74  QDDDGQWISLRYDLTAP 90
           + +  +  +L+      
Sbjct: 395 EVEKER-FALKPMNCPG 410



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 21  KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
           +E   R+      ++ Y N GF  + TP + +S  L +           +FS + +  + 
Sbjct: 476 EEAAKRDH-RKIGKSEYNNRGFQEVITPNM-FSTKLWEQSGHWQHYATNMFSFEVEKER- 532

Query: 81  ISLRYDLTAP 90
            +L+      
Sbjct: 533 FALKPMNCPG 542


>gi|194477323|ref|YP_002049502.1| prolyl-tRNA synthetase [Paulinella chromatophora]
 gi|171192330|gb|ACB43292.1| prolyl-tRNA synthetase [Paulinella chromatophora]
          Length = 604

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 2/74 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS--LGKFLPDEDRPNKGVF 71
           G         R+  +I   +R    + G   +  P L+ +D   L K      +    +F
Sbjct: 38  GIYAYLPLLWRVLKKISSCVREEMTSAGAIELLMPQLQPADIWQLSKRWAGYTQGEGIMF 97

Query: 72  SLQDDDGQWISLRY 85
           +L+D  G+ ++L  
Sbjct: 98  NLKDRQGRELALGP 111


>gi|260777881|ref|ZP_05886774.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605894|gb|EEX32179.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 642

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/350 (12%), Positives = 95/350 (27%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 299 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E    +              +
Sbjct: 359 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    +  I+       G  Y     +        
Sbjct: 418 VVKLSTRPEKRVGSDEIWDQSEEALKQSLEAMNIEYELQEGEGAFYGPKIEF---TLHDC 474

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           ++   +              G  Y    +  +   +        + R I  L   E    
Sbjct: 475 LDRAWQCGTVQLDFNLPGRLGATYVDENNERQVPVMIHRAILGSLERFIGILIE-EYFGF 533

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P     M+         Q   Q L+  GIRA+  L  ++  G +++    +  P
Sbjct: 534 FPTWLSPEQAVIMNITDKQSDYAQEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVP 592

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  S+ +  ++   + + E
Sbjct: 593 YMLVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDEISSRKLNLEE 642



 Score = 41.4 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 43/152 (28%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR   + YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   +   ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQEEVTSCIKMV 405


>gi|302551280|ref|ZP_07303622.1| glycyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302468898|gb|EFL31991.1| glycyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 460

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  + +   K +   Q LR      E     +   G + +  D    P  +    
Sbjct: 367 VAVLPLSRNPELSPKAKGLAQALR-QNWNIEFD--DAGAIGRRYRRQDEIGTPFCVTVDF 423

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    K+    +   E +  AR
Sbjct: 424 DTLEDNAVTVRERDTMKQERISLDQIEGYLAAR 456


>gi|193213223|ref|YP_001999176.1| prolyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|259511581|sp|B3QPX3|SYP_CHLP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|193086700|gb|ACF11976.1| prolyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 481

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/250 (11%), Positives = 68/250 (27%), Gaps = 21/250 (8%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    + V      +       +   S   +          EA+
Sbjct: 156 WQEGHTAHADPEEAQEEVIRMINVYRTFAEEYMAMPVIVGKKSESEKFAGADATYCIEAM 215

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-------K 363
           +      +       G            ++    +          +RLI AL       K
Sbjct: 216 MQDGKALQAGTSHNLGQNFAKAFDCQFQTKEGVLDYVWATSWGVSTRLIGALIMAHSDDK 275

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
            L            ++        +  +  +   + L   GI   +    + + G +   
Sbjct: 276 GLVLPPKLASRQVVIIPILKGDKEEVRAHARFIAKALNKHGISTFVDDSENNSPGWKFAE 335

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  P+ I  G  + + G   +      ++    +           A++T  I E+++
Sbjct: 336 YELQGIPVRIELGPRDIAEGKCIVARRDTFEKTEVLLD----------AEMTENIEEILN 385

Query: 484 TVKKILQENK 493
            +++ L E  
Sbjct: 386 NIQQNLYERA 395


>gi|320100286|ref|YP_004175878.1| prolyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319752638|gb|ADV64396.1| prolyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 480

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 81/256 (31%), Gaps = 31/256 (12%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           + E+   ++   A          ISE +       NR+++   IV+   + T    E   
Sbjct: 156 VREIMGFIEAHTAHATMEEAEKQISEAIAIYKEFFNRLQLPYFIVKTPPWDTFAGAEYNY 215

Query: 312 GFPVMNEKQKPVVFGSVGGGGR---------YDGLVSRFKGQNVPATGFSIGISRLIVAL 362
            F  +    K +  GSV   G+         Y       K       G S  +   ++ +
Sbjct: 216 DFITVMPDGKGLELGSVINLGQKFAKAFEIKYMDTDGVEKHVYQTCYGVSERVLGAVIGI 275

Query: 363 KSLESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
              E+      ++ P+ +  +      ++  L      + +L+  G+R  +        G
Sbjct: 276 HGDETGLFFPPDIAPIQVVIVPVMKPGENQVLEYAFKVSNILKAHGVRVFVDTDQEHTPG 335

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +  Y + +  P  I  G  E     + I                   R  +  +  + +
Sbjct: 336 WKYYYWEMKGVPTRIEVGRKELDASTVTI------------------ARRDKREKHVVKL 377

Query: 479 SELVSTVKKILQENKE 494
            E V  ++KI  E  E
Sbjct: 378 EEAVDLLRKIWSEINE 393


>gi|54025682|ref|YP_119924.1| threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54017190|dbj|BAD58560.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 703

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 40/113 (35%), Gaps = 21/113 (18%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY-ADRRNCPLA 432
            + PV +  +              ++LR  G+RA++     +         A +   P  
Sbjct: 586 WLSPVQVVGIPVAEAFAPHLDRVVELLRDHGVRAQVDRSDDRMQKKIFNNTAQK--VPFM 643

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           ++ G  + + G +  +    G +++                  +P+++ V+T+
Sbjct: 644 LLAGERDVNAGAVSFR-FRDGTQVNG-----------------VPVADAVATI 678


>gi|258625495|ref|ZP_05720387.1| threonyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582201|gb|EEW07058.1| threonyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 642

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 37/102 (36%), Gaps = 1/102 (0%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  ++             Q L+  GIRA+  L  ++  G +++    +  P  ++ G  
Sbjct: 542 QVVVVNITDKQADYAHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQ 600

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           E   G + ++          ++ +     +A +    + + E
Sbjct: 601 EMEAGEIAVRTRKGKDLGKFKLDDFIKHIQAEIVSRKLNLEE 642



 Score = 41.0 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 43/167 (25%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V      +       K
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK 420


>gi|269963856|ref|ZP_06178168.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269831343|gb|EEZ85490.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 655

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/350 (12%), Positives = 95/350 (27%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 312 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 371

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E  + +              +
Sbjct: 372 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDNI 430

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    S  I        G  Y     +        
Sbjct: 431 VVKLSTRPEKRVGSDEIWDQSEEALKQSLESMEIPYEIQEGEGAFYGPKIEFTLY---DC 487

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           ++   +              G  Y G  +      +        + R I  L    +   
Sbjct: 488 LDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 547

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    I  M+         Q   Q L+ +GIRA+  L  ++  G +++    +  P
Sbjct: 548 PTWLAPEQAIL-MNITDKQSEYVQEVVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVP 605

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  ++ +  ++   + + E
Sbjct: 606 YMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISSRKLNLEE 655



 Score = 41.7 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 45/152 (29%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR+  + YG+  ++ PL+     L +     D+ 
Sbjct: 270 MQQEAP-GMVFWHHNGWSVFRDLEVFIRSKLDEYGYQEVKGPLMMDR-VLWERSGHWDKY 327

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 328 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 386

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   + + ++ V
Sbjct: 387 IMRVRGFTQDDAHIFCTESQIQEEVTNCIKMV 418


>gi|254785570|ref|YP_003072999.1| threonyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259516754|sp|C5BSQ1|SYT_TERTT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|237684404|gb|ACR11668.1| threonine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 637

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R +    G+  I+TP +       +     D+   G+F++
Sbjct: 261 GMVFWHPKGWSVYTAIEQYMRKVQRENGYKEIKTPQVVDRSLWERS-GHWDKFRDGMFTV 319

Query: 74  QDDDGQWISLRYDLTA 89
           + +  +  +++     
Sbjct: 320 ESES-RDYAVKPMNCP 334



 Score = 44.8 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 31/94 (32%), Gaps = 1/94 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M+   +     +     L+  G R    L  ++  G +++    +  P  ++ G  
Sbjct: 540 QVVVMNITDNQAEYAEKVRNSLQNEGFRVVSDL-RNEKIGFKIREHTIQKVPYLLVVGDQ 598

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           E     + ++        +  + +  +     VA
Sbjct: 599 EMENNSVAVRTREGKDLGTYSVDDFATLLADSVA 632


>gi|114705319|ref|ZP_01438227.1| ATP phosphoribosyltransferase regulatory subunit [Fulvimarina
           pelagi HTCC2506]
 gi|114540104|gb|EAU43224.1| ATP phosphoribosyltransferase regulatory subunit [Fulvimarina
           pelagi HTCC2506]
          Length = 382

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/325 (16%), Positives = 113/325 (34%), Gaps = 50/325 (15%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
           +++ +++E  G   I   LL+ ++       +  R  + ++  + + G  + LR D T P
Sbjct: 9   EALASLFETRGASAITMDLLQPAEPYLDTAGEALR--RRIYLTRGEAGINLCLRPDFTIP 66

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
           +  +  E  + +    R    G VFR  + G G          D    +  TADA     
Sbjct: 67  VCLHHIERREPLPC--RYSYRGLVFRQPRGGEGPRELEQAGIEDLGEPNLATADARALAD 124

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV-------------- 196
              + E +G++ +   + + ++ + +  L  +GL    +                     
Sbjct: 125 ALASCEVLGVEADSIDVVLGDQGLFEAFLSALGLPDGWQRRLIRTFGEDRQLDNVMAALA 184

Query: 197 ---LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE------------------ 235
                ++D +    L+  +            D  + A L                     
Sbjct: 185 NPGSTSLDNVPDGLLELAREREEGALIRAIRDRMEEAGLPPHSGRTPQEVAQRLIEKVAT 244

Query: 236 --------QIDIMVSFLSIDLE--KSMHELYELVKGT-IAGEKGFNELVVISELVRKSGY 284
                    ID++  FL+ID    ++   +  L +G  +  ++        +  ++ +G 
Sbjct: 245 AEGRLSGGSIDLLKRFLAIDCPLAEAADAVRALAEGAGLVLDRAIGFFETRNLALQAAGV 304

Query: 285 NSNRIKISSTIVRGLEYYTGCVYEA 309
           + + I   +   R ++YYTG V+E 
Sbjct: 305 DLSAITYRAAFGRPIDYYTGMVFEV 329


>gi|241761215|ref|ZP_04759303.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374122|gb|EER63619.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 659

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 87/287 (30%), Gaps = 13/287 (4%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           ++ E     R        GL  V+ L      D++  F     + +E  D +    SI  
Sbjct: 374 RMLEFGCCHRNEAHGALHGLMRVRQL----TQDDAHIFCTAEQIVTETKDFVNLLDSIYR 429

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +         +        G +EL   +E   +S      I      + G   + G   E
Sbjct: 430 DLGFTSYAVKLSLRPELRAGDDELWDNAENGLRSALEQVGIT-DYEELPGEGAFYGPKLE 488

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLV-----SRFKGQNVPATGFSIGISRLIVALK 363
             L   +    Q   +        R D        SR +   +           + + ++
Sbjct: 489 FHLTDAIGRTWQCGTLQLDYVLPERLDASYVAEDGSRKRPVMLHRAIIGTFERFIGILIE 548

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                          ++ T+  ++DS ++     + ++ AG+R  +    ++    +++ 
Sbjct: 549 HHAGRFPLWMAPVQAVVATIVSEADSFAE--SVVEKMKAAGLRV-VSDIRNEKINYKIRE 605

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 P  ++ G  E   G + I+ L    ++   +    +     
Sbjct: 606 HSLTKVPNILVVGKREAEEGKVAIRKLGSRDQIILSVDEAIALLLEE 652



 Score = 39.8 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 30/89 (33%), Gaps = 14/89 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I  ++   +R   +N  +  ++TP L  + +L +      +  + +F +
Sbjct: 268 GSVFWHPNGYTIWLQLEAYLRRRMKNANYKEVKTPQLMDA-ALWEASGHWGKFRENMFVV 326

Query: 74  QDD-------------DGQWISLRYDLTA 89
            D+              G  ++L+     
Sbjct: 327 PDEIPSTDPDKPVLSGKGNLMALKPMNCP 355


>gi|307244722|ref|ZP_07526824.1| proline--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306491899|gb|EFM63950.1| proline--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 481

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 26/76 (34%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              +     ++I    +    +         L+  GI  E+   S+ + G +   A+ + 
Sbjct: 287 PPKMAPTQVIIIPIAANKGGVMEVVDKVAADLKAKGITVEVDDRSNYSPGYKFNDAEMKG 346

Query: 429 CPLAIIQGTGERSRGM 444
            P+ +  G  +  +  
Sbjct: 347 IPVRLEIGPKDIEKNQ 362


>gi|157813264|gb|ABV81377.1| putative histidyl-tRNA synthetase [Triops longicaudatus]
          Length = 149

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 63/158 (39%), Gaps = 20/158 (12%)

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                ADAE   ++ + L ++     ++ + +N+R +LDG+ E  G+  D    +   + 
Sbjct: 3   YDPMIADAECVRVVVEILSSL--PVGNFQVKVNHRLVLDGLFEACGVPAD----KFRTIC 56

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
            A+DKLDK   + V+  + +              L +   D +  F+ +     + E  +
Sbjct: 57  SAVDKLDKSPWEEVRKEMVDE-----------KGLDAAVADRIGEFVRLTGRADLVEQLK 105

Query: 258 ---LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
               +K +   ++G + + +        G N N +   
Sbjct: 106 ANATLKKSKVAQEGLDAMKLFLHYCDLYGMNENVVFDM 143


>gi|56551661|ref|YP_162500.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|260752754|ref|YP_003225647.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|73919847|sp|Q5NPH1|SYT_ZYMMO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56543235|gb|AAV89389.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|258552117|gb|ACV75063.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 659

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 87/287 (30%), Gaps = 13/287 (4%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           ++ E     R        GL  V+ L      D++  F     + +E  D +    SI  
Sbjct: 374 RMLEFGCCHRNEAHGALHGLMRVRQL----TQDDAHIFCTAEQIVTETKDFVNLLDSIYR 429

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           +         +        G +EL   +E   +S      I      + G   + G   E
Sbjct: 430 DLGFTSYAVKLSLRPELRAGDDELWDNAENGLRSALEQVGIT-DYEELPGEGAFYGPKLE 488

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLV-----SRFKGQNVPATGFSIGISRLIVALK 363
             L   +    Q   +        R D        SR +   +           + + ++
Sbjct: 489 FHLTDAIGRTWQCGTLQLDYVLPERLDASYVAEDGSRKRPVMLHRAIIGTFERFIGILIE 548

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                          ++ T+  ++DS ++     + ++ AG+R  +    ++    +++ 
Sbjct: 549 HHAGRFPLWMAPVQAVVATIVSEADSFAE--SVVEKMKAAGLRV-VSDIRNEKINYKIRE 605

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 P  ++ G  E   G + I+ L    ++   +    +     
Sbjct: 606 HSLTKVPNILVVGKREAEEGKVAIRKLGSRDQIILSVDEAIALLLEE 652



 Score = 39.8 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 30/89 (33%), Gaps = 14/89 (15%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I  ++   +R   +N  +  ++TP L  + +L +      +  + +F +
Sbjct: 268 GSVFWHPNGYTIWLQLEAYLRRRMKNANYKEVKTPQLMDA-ALWEASGHWGKFRENMFVV 326

Query: 74  QDD-------------DGQWISLRYDLTA 89
            D+              G  ++L+     
Sbjct: 327 PDEIPSTDPDKPVLSGKGNLMALKPMNCP 355


>gi|33863527|ref|NP_895087.1| prolyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|81834835|sp|Q7TUU4|SYP_PROMM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|33640976|emb|CAE21434.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase
           [Prochlorococcus marinus str. MIT 9313]
          Length = 599

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +++     D       +     L+ A I A +   + +  G + K AD 
Sbjct: 489 KWPLAIAPFEVIIVVANIQDEVQQKLAEQLYSELQAADIEALLDDRTERA-GVKFKDADL 547

Query: 427 RNCPLAIIQGTGERSRGMLQI 447
              P  ++ G    ++G +++
Sbjct: 548 IGIPWRVVVGRD-AAKGQVEL 567



 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 42/157 (26%), Gaps = 11/157 (7%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--- 69
            G         R+  +I   ++   +  G      P L+ ++ L +          G   
Sbjct: 37  SGIYAYLPLMWRVLRKITSIVQEEMDATGALETLLPQLQPAE-LWRRSGRWQGYTAGEGL 95

Query: 70  VFSLQDDDGQWISLRY---DLTAPLA----RYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           +F L+D  G+ + L     ++   LA    R   +   T+      +R     R      
Sbjct: 96  MFHLEDRQGRELGLGPTHEEVITSLAGDLLRSYRQLPVTLYQIQSKFRDEIRPRFGLMRG 155

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
             F         +  +        M           G
Sbjct: 156 REFIMKDAYSFHSCEADLAMTYRAMDEAYQRIFSRCG 192


>gi|223994633|ref|XP_002287000.1| glycyl tRNA synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220978315|gb|EED96641.1| glycyl tRNA synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 683

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/408 (9%), Positives = 100/408 (24%), Gaps = 32/408 (7%)

Query: 83  LRYDLTAP-----LARYVAENFDTIVFPCRTYRIG-PVFRNEKHGPGRFRQFIQCDVDNV 136
           LR + TA        R +  N   + F      +G       + G  R R+F   ++++ 
Sbjct: 252 LRPE-TAQGLFVNFRRLLDANSQKMPFAAAQIGLGFRNEIAPRSGLLRVREFCMGEIEHF 310

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
            +  + +      +    L   G             ++ D +   +  +           
Sbjct: 311 VNPDDKSHPNFSSVANKELVLFGRDDQLGSGKTKTIRVGDAVATGLVNNETLAYFMARTQ 370

Query: 197 LRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTS-------EQIDIMVSFLSIDLE 249
           L              +  L       + D       +S          D     L +  +
Sbjct: 371 LFMERIGMDPSRLRFRQHLTTEMAHYACDCWDLEIQSSYGWVECVGHADRACYDLDVHGK 430

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
            +   +   +K   A E    +L    + + K+     R+  ++       +     +E 
Sbjct: 431 ATKTPMIATMKLDEAREVEVAKLKFDRKALGKTFKGDQRVVAAALEALAENWA---DFEP 487

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           +      + K     F        +     +        +          +    LE   
Sbjct: 488 VATTLESDGKATVDGFEITKEMVTWKKETKKVHEIKYTPSVIEPSFGMGRILYSLLEHCF 547

Query: 370 NNIKE--------------MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
                                   +  +    +  +        L  + +   +   S+ 
Sbjct: 548 YQRDADEQRCVMRFKPAVAPHKCAVLPISSGDEVNAVVDEIAADLMDSDMATRVD-KSTA 606

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           + G +   AD    P A+       + G + +++     ++       
Sbjct: 607 SLGRRYSRADEVGVPFAVTVDFDTLADGTVTLRERDSTVQIRLPKSEV 654


>gi|116515019|ref|YP_802648.1| hypothetical protein BCc_078 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256873|gb|ABJ90555.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 642

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/354 (11%), Positives = 90/354 (25%), Gaps = 11/354 (3%)

Query: 99  FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
           F          ++    RN+              +D                   ++   
Sbjct: 263 FWHKNGYIIFKQLENFLRNKLFQNNYIEVKSPIIIDKSLWKKSGH----WKHYNQSIFTT 318

Query: 159 GIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEG 218
             + N Y I   N      I +       D             +     L G+  + G  
Sbjct: 319 KSENNQYCIKPMNCPAHVQIFKYGLKSYKDLPIRMAEFGSCHRQETSGSLHGLFRVRG-F 377

Query: 219 RTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISEL 278
             D++  F     + SE    +     +       +++           G +++   +E 
Sbjct: 378 TQDDAHIFCTKKQIKSELNHCIRLLFDLYHTFGFKKIFIKFSTRPENRIGKDDIWDQAEK 437

Query: 279 VRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLV 338
             +     N +     I  G  Y      E  L   +    Q   +        + D   
Sbjct: 438 DLELVLKKNNLFFEYQIGEGAFYG--PKIEIALEDNLKRIWQCGTIQLDFYLSKQLDAFY 495

Query: 339 SRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
                            +G     + +   E +      + P+ +  ++     +   + 
Sbjct: 496 INKNNIKKNPIIIHRAFLGSIERFIGILIEEYNGKLPIWLCPIQVAIINVSEKHIFFIKN 555

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
             +      IR  +   S+ +   ++++   +  P  II G  E     + I++
Sbjct: 556 IEKKFLKNNIRF-ISDISNNSISFKIRFYLEQKVPYIIIIGDKEVKNNYITIRN 608


>gi|76613805|ref|XP_585755.2| PREDICTED: hypothetical protein [Bos taurus]
 gi|297473149|ref|XP_002686423.1| PREDICTED: hypothetical protein [Bos taurus]
 gi|296489106|gb|DAA31219.1| hypothetical protein BOS_3571 [Bos taurus]
          Length = 475

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 36/111 (32%), Gaps = 8/111 (7%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I    +  G   +  P L  ++ L +     D   + +  L+D  
Sbjct: 90  LLPYTVRAMEKLVRVIDQEMQTIGGQKVNMPSLSPAE-LWRATKRWDSMGRELLRLRDRH 148

Query: 78  GQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           G+   L    +  +TA +A   ++   +                ++  P  
Sbjct: 149 GKDYCLGPTHEEAITALVA---SQKTLSYKQLPFLLYQVTRKFRDEPRPRF 196


>gi|167750313|ref|ZP_02422440.1| hypothetical protein EUBSIR_01287 [Eubacterium siraeum DSM 15702]
 gi|167656673|gb|EDS00803.1| hypothetical protein EUBSIR_01287 [Eubacterium siraeum DSM 15702]
 gi|291529864|emb|CBK95449.1| glycyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 458

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/228 (8%), Positives = 58/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
              +   +  K  +       E + + +  ++     ++       +    +        
Sbjct: 233 DWFYFWKDYCKKWLLSLGINEENLRLRDHDQEELCFYSKATTDFEYLFPFGWGELWGVAD 292

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE--- 366
              + +    +              +  V      ++      + +       + LE   
Sbjct: 293 RTDYDLTQHIKTSGQKMEYFDPETNEKYVPYVIEPSLGVERLFLAVITEAYDEEQLEDGT 352

Query: 367 --SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +  +    + PV    +        K       L  +     +    +   G + +  
Sbjct: 353 TRNVMHFHPYLAPVKAAVLPLSKKLADKAGEIADEL--SKYFC-VDYDDAGAIGKRYRRQ 409

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  I         G + +++    K+    I + + + E R+A
Sbjct: 410 DEIGTPFCITYDFDSVEDGCVTVRERDSMKQERMPIADVKKYIEDRIA 457


>gi|20429011|emb|CAC79651.1| threonyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 531

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/126 (10%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+               ++ ++   S+S+   +     +  AG  
Sbjct: 406 HRAILGSVERMFAILLEHYNGKWPLWLSPRQAIVCSIS--SNSVEYAKQVRVRIHEAGFH 463

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +   + +    +++ A        ++ G  E   G + ++   K +  +  I +  + 
Sbjct: 464 VAID-ETDRTIQKKVREAQLAQFKYILVVGAQEAETGQVSVRVRDKAELATVSIDDIITR 522

Query: 467 REARVA 472
            +  VA
Sbjct: 523 FKEEVA 528



 Score = 40.6 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N+++D +R  Y + G+  + +P + Y+  L +         + +F  + + 
Sbjct: 161 FLPHGAIIYNKLMDFLRQQYRDRGYQEVLSPNI-YNMQLWETSGHAANYKENMFVFEIEK 219

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 220 -QEFGLKPMNCPG 231


>gi|152977206|ref|YP_001376723.1| glycyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025958|gb|ABS23728.1| glycyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 458

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 60/238 (25%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLEK--SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E+        E  K  +       + + + +   +   + +           
Sbjct: 223 LEFFCKPGEELEWFTFWRETCKNWLLSLGMNEDSMRLRDHGEEELSHYSNATTDIEFKFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGIASRTDFDLKRHMEHSSEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +          +     L        +    +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGAREVFAEL-AKDF--MVDYDET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   +S+ E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKSFLEKKIQ 457


>gi|222478731|ref|YP_002564968.1| glycyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451633|gb|ACM55898.1| glycyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 594

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 27/105 (25%), Gaps = 7/105 (6%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           + +D             LR AG+        S + G + +  D    P  +         
Sbjct: 483 VTNDDRLTELADRVAADLREAGVAV--AYDDSGSIGRRYRRQDEIGTPFCVTIDRDGIEG 540

Query: 443 G---MLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
                + +++     ++    +   +   A           LV  
Sbjct: 541 DGPETVTVRERDSAVQVRVPAEELATELTALRTGGE--FDALVDR 583


>gi|113867357|ref|YP_725846.1| threonyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134164|sp|Q0KBZ3|SYT_RALEH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113526133|emb|CAJ92478.1| Threonyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 635

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/198 (9%), Positives = 51/198 (25%), Gaps = 4/198 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   +R    + G+D + TP +       K         + +F +
Sbjct: 261 GMVFWHPKGWQVWQAVEQYMRGRLTDAGYDEVRTPQVMDRSLWEKS-GHWQNYKENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +++        +    +                  +     G     ++   
Sbjct: 319 TESEKRDYAIKPMNCPGHVQIF-NHGLRSYRDLPLRLAEFGACHRNEPSGALHGLMRVRG 377

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                +      E  +  A     +     D   G  + K+   +        D+  +  
Sbjct: 378 FVQDDAHIFCTEEQIVAEAKAFNELAFSVYD-DFGFKDVKVKLSLRPDQRAGSDEIWDHA 436

Query: 194 LIVLRAIDKLDKFGLQGV 211
              LR   +      + +
Sbjct: 437 EEGLRLALRACGVDWEEL 454


>gi|114570943|ref|YP_757623.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Maricaulis
           maris MCS10]
 gi|122315357|sp|Q0AM08|SYT_MARMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114341405|gb|ABI66685.1| Ser-tRNA(Thr) hydrolase [Maricaulis maris MCS10]
          Length = 644

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 42/160 (26%), Gaps = 2/160 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF-SLQDD 76
                 R+   +   +R   E  G+  I TP L       +     D+  + +F S  D 
Sbjct: 266 WHPNGWRLYRTVTSYMRRRLEAAGYVEIRTPQLMDRK-FWEASGHWDKYRENMFISSIDQ 324

Query: 77  DGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV 136
           + + ++++        +   +   +                 +                 
Sbjct: 325 EEKVLAVKPMNCPCHVQVFNQGQKSYRDLPLRMAEFGSCHRYEPSGSLHGLMRVRGFVQD 384

Query: 137 GSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
            +       ++   ++D  E +     D+       K  D
Sbjct: 385 DAHIFCTSDQITAEVSDFCELLKSVYADFGFEEPRIKFSD 424



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 103/378 (27%), Gaps = 32/378 (8%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N   +     +Y    +           +   +   +  G   +  +      +    + 
Sbjct: 269 NGWRLYRTVTSYMRRRLEAAGYVEIRTPQLMDRKFWEASGHWDKYRENMFISSIDQEEKV 328

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
           + +K  +    +            + L    ++ E     R        GL  V+     
Sbjct: 329 LAVKPMNCPCHVQVFNQGQKSYRDLPL----RMAEFGSCHRYEPSGSLHGLMRVRG---- 380

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     +T+E  D      S+  +    E             G +E+   +E
Sbjct: 381 FVQDDAHIFCTSDQITAEVSDFCELLKSVYADFGFEEPRIKFSDRPEQRVGSDEVWDQAE 440

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRY 334
              K+   ++ +        G  Y     +   +AI         Q              
Sbjct: 441 ASLKAAAEASGLDYEYNPGDGAFYGPKLDFVVKDAIGREWQTGTIQCDFNLPERLDASFI 500

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                + +   +           L V ++S             V+I T+  D+D  ++  
Sbjct: 501 GDDSEKHRPVMLHRAILGSLERFLGVLIESYAGKLPFWLAPRQVVIATITSDADGYAEEV 560

Query: 395 MYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
               +   AG+ AE  L + K        + G           P+  + G  E   G L 
Sbjct: 561 KAAMV--KAGLHAETDLRNEKINYKVREHSVGK---------VPVIAVVGRKEAEDGTLA 609

Query: 447 IKDLAKG--KELSREIKN 462
           ++ L +G   +    + +
Sbjct: 610 LRFLGEGGKTQEILSLAD 627


>gi|305664978|ref|YP_003861265.1| prolyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88707390|gb|EAQ99635.1| prolyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 491

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 69/253 (27%), Gaps = 27/253 (10%)

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                      A E+    + V ++             I +   R          EA++ 
Sbjct: 172 EGHTAHATEKEAIEEAEQMMHVYADFAENHMAVPVIKGIKTESERFAGAIETYCIEALMQ 231

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLES 367
                +       G            ++   Q           +RL+ AL          
Sbjct: 232 DGKALQAGTSHFLGQNFAKAFDVKFATKEGKQEYVWATSWGVSTRLMGALVMTHSDDSGL 291

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                     V+I  +    + L           + LR  GI  +     +   G +   
Sbjct: 292 VLPPKLAPIQVVIVPIYRGLEQLDAISEKVGPLVKELRAKGISVKYDSRDTHKPGFKFNE 351

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  P+ +  G  +   G  ++                   R     ++TIP  E+VS
Sbjct: 352 YELKGVPVRLAIGQRDMENGTYEV------------------ARRDTFEKVTIPEDEVVS 393

Query: 484 TVKKILQENKEEI 496
            ++ +L++ ++ I
Sbjct: 394 KIEFLLEDIQKNI 406


>gi|320527308|ref|ZP_08028493.1| glycyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132332|gb|EFW24877.1| glycyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 459

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/225 (8%), Positives = 44/225 (19%), Gaps = 9/225 (4%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                        +    + G     +  +          K G      K          
Sbjct: 232 DDEWFPYWRNFCMDWIVKLGGNPENLRFRDHEKEELSFYSK-GTTDIEYKFPWGWGEVWG 290

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
                 Y+        N   K + +       +Y   V                 +    
Sbjct: 291 IADRTDYDLT---QHQNTSGKDLTYLDPITNEKYLPYVVEPAVGVERLFFMFFTDAYDEE 347

Query: 361 ALK--SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            L+             + PV    +        K +     L +           + + G
Sbjct: 348 TLENGETRVVMRFNPVLAPVKAAILPLRKKYAEKAEEIRHEL-SYDFTVT--YDEAGSIG 404

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            + +  D    P  I         G + I+     ++    ++  
Sbjct: 405 KRYRRQDEVGTPFCITIDEQTMEDGTVTIRYRDSMEQERMTVEEV 449


>gi|269966330|ref|ZP_06180417.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269829069|gb|EEZ83316.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 485

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 95/350 (27%), Gaps = 11/350 (3%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 142 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 201

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E  + +              +
Sbjct: 202 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDNI 260

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    S  I        G  Y     +        
Sbjct: 261 VVKLSTRPEKRVGSDEIWDQSEEALKQSLESMDIPYEIQEGEGAFYGPKIEFTLY---DC 317

Query: 316 MNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTN 370
           ++   +              G  Y G  +      +        + R I  L    +   
Sbjct: 318 LDRAWQCGTVQLDFNLPGRLGATYVGENNERLVPVMIHRAILGSLERFIGILIEEYAGFF 377

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                    +  M+         Q   Q L+ +GIRA+  L  ++  G +++    +  P
Sbjct: 378 PTWLAPEQAVL-MNITDKQSGYVQEIVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVP 435

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             ++ G  E   G + ++          ++ +  ++ +  ++   + + E
Sbjct: 436 YMLVVGDQEMEAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISSRKLNLEE 485



 Score = 41.4 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 44/152 (28%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR   + YG+  ++ PL+     L +     D+ 
Sbjct: 100 MQQEAP-GMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR-VLWERSGHWDKY 157

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 158 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 216

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   + + ++ V
Sbjct: 217 IMRVRGFTQDDAHIFCTESQIQEEVTNCIKMV 248


>gi|302518917|ref|ZP_07271259.1| glycyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|318059913|ref|ZP_07978636.1| glycyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318081299|ref|ZP_07988631.1| glycyl-tRNA synthetase [Streptomyces sp. SA3_actF]
 gi|333027254|ref|ZP_08455318.1| putative glycyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|302427812|gb|EFK99627.1| glycyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|332747106|gb|EGJ77547.1| putative glycyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 460

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/232 (9%), Positives = 51/232 (21%), Gaps = 19/232 (8%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-----IVRGLEYYTGCV 306
           M + +    G    E+         E +      +  I+                     
Sbjct: 231 MEQRWNWYTGLGLREENMRWFEHPKEKLSHYSKRTADIEYRFQFGGSEWGELEGVANRTD 290

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           Y+         +        +      Y  ++    G       F +       A  +  
Sbjct: 291 YDLSAHAKASGQDLSYRDQEAGENWTPY--VIEPAAGVGRTMLAFMLDAYAEDEAPNAKG 348

Query: 367 SST-------NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFG 418
                     +         +  +  + +   K +     LR    I        +   G
Sbjct: 349 KLEKRVVMRLDPRLAPVKAAVLPLSRNPELSPKAKSLAAALRQHWNI----DFDDAGAIG 404

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            + +  D    P  +           + +++    K+    +   E +  AR
Sbjct: 405 RRYRRQDEIGTPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQIEGYLSAR 456


>gi|111023830|ref|YP_706802.1| threonyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123339593|sp|Q0S1E2|SYT_RHOSR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110823360|gb|ABG98644.1| threonine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 685

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY-ADRRNCPLA 432
            + PV +  +              + L+ AG+RAE+     +         A +   P  
Sbjct: 570 WLAPVQVVGIPVAETFADHLFDVVKRLKAAGVRAEVDASDDRMQKKIFNNTAQK--VPFM 627

Query: 433 IIQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQIT--IPISELVS 483
           ++ G  +   G +  +    G +++   + +        + +     P +EL+ 
Sbjct: 628 LLAGARDVEAGAVSFR-FRDGTQVNGVPVDDAVRIVTEWIGRRENASPTAELLQ 680


>gi|319405749|emb|CBI79372.1| Threonyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 654

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 46/380 (12%), Positives = 97/380 (25%), Gaps = 20/380 (5%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
            +  +                  +           +        S       E       
Sbjct: 266 MIFWHPKGWKMFQNLISYMRRRLDNHKYAEVQAPQVLDKSLWEISGHWEWYKENMFKTIP 325

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL--RAIDKLDKFGLQGV 211
             +    +       +N    +      +  + D  +      L  R        GL  V
Sbjct: 326 AADDWNNEHIYALKPMNCPGHVQIFKHGLKSYRDLPIRLAEFGLVHRYEPSGSLHGLMRV 385

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEK 267
           +        D++  F     L  E + I    LS   +    E+   +          ++
Sbjct: 386 RS----FTQDDAHIFCTEEQLADECLSINDLILSTYADFGFKEISIKLSTRPEKRVGSDE 441

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
            ++    I   V K+       ++  +I+ G   + G  +E  L   +  E Q       
Sbjct: 442 LWDHAESIMTFVLKTIEKKFSGRVKISILPGEGAFYGPKFEYTLTDAIGREWQCGTTQVD 501

Query: 328 VGGGGRYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
                R+         +            G     + +     S +    + P  I    
Sbjct: 502 FNLPERFGAFYIDKDSEKRQPVMIHRAIFGSMERFLGILIENFSGHIPFWLAPQQIVVAT 561

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCPLAIIQGTGERS 441
             SDS    +  T+ L+  G+ A +   + K              +  P+ ++ G  E  
Sbjct: 562 ITSDSNEYAKKITEKLKAIGLLATLDSRNEKINYKIREHF----LQKIPVILVCGKREAE 617

Query: 442 RGMLQIKDLAKGKELSREIK 461
              + ++ L   K+    I+
Sbjct: 618 TNSVNMRRLGSVKQTFLPIE 637


>gi|315427010|dbj|BAJ48627.1| glycyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 481

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 39/134 (29%), Gaps = 12/134 (8%)

Query: 346 VPATGFSIGISRLIVALKSLE---------SSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
                 S+G+ R ++AL                +       + +  +    +     Q  
Sbjct: 348 PHVFELSMGVDRSLLALLEHGYVQENGRSVLRLHPALAPYTIAVFPLLDRPELTQVAQQL 407

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L+   +  + F     + G + +  D    P  I           + ++D    K+ 
Sbjct: 408 YNKLQ---LDFDTFYDEKGSIGRRYRRQDEIGTPFCITVDYQTLEDNTVTVRDRDTMKQE 464

Query: 457 SREIKNNESWREAR 470
              I+  +S+   +
Sbjct: 465 RVNIEVLKSYISDK 478


>gi|295839019|ref|ZP_06825952.1| glycine-tRNA ligase [Streptomyces sp. SPB74]
 gi|295827291|gb|EFG65335.1| glycine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 460

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/232 (8%), Positives = 51/232 (21%), Gaps = 19/232 (8%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-----IVRGLEYYTGCV 306
           M + +    G    E+         E +      +  I+                     
Sbjct: 231 MEQRWNWYTGLGLREENMRWFEHPKEKLSHYSKRTADIEYRFQFGGSEWGELEGVANRTD 290

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           Y+         +        +      Y  ++    G       F +       A  +  
Sbjct: 291 YDLSAHAKASGQDLSYRDQEAGENWTPY--VIEPAAGVGRTMLAFMLDAYAEDEAPNAKG 348

Query: 367 SST-------NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFG 418
                     +         +  +  + +   K +     LR    I        +   G
Sbjct: 349 KLEKRVVMRLDPRLAPVKAAVLPLSRNPELSPKAKSLAAALRQHWNI----DFDDAGAIG 404

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            + +  D    P  +           + +++    K+    +   E +  +R
Sbjct: 405 RRYRRQDEIGTPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQIEGYLSSR 456


>gi|118591255|ref|ZP_01548654.1| threonyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118436331|gb|EAV42973.1| threonyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 656

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 76/249 (30%), Gaps = 8/249 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG----EKGFNELVVIS 276
           D++  F     +  E + I    LS+  +    E+   +          +  ++    I 
Sbjct: 394 DDAHVFCTEEQMADECLKINDLILSVYEDFGFDEIVVKLSTRPEKRVGTDAAWDHAEAIM 453

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336
             V K     +  ++ + I+ G   + G  +E  L   +  E Q            R+  
Sbjct: 454 SDVLKQIEAQSGGRVKTDILPGEGAFYGPKFEYTLRDAIGREWQCGTTQVDFNLPERFGA 513

Query: 337 LVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                 G+            G     + +     + +      P+ I      S++    
Sbjct: 514 FYVDKDGEKKTPVMIHRAICGSMERFLGILIENFAGHFPLWFAPLQIVVATITSEADDYG 573

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
           Q    +L+  G++ E     ++    +++       P+ I+ G  E     + ++ L   
Sbjct: 574 QEVADLLKAKGLKVETDF-RNEKINYKVREHSLAKVPVIIVCGMREAEERTVNVRRLGSK 632

Query: 454 KELSREIKN 462
            +    +  
Sbjct: 633 DQTPMGLDE 641


>gi|255348758|ref|ZP_05380765.1| prolyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503298|ref|ZP_05381688.1| prolyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255506977|ref|ZP_05382616.1| prolyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|407685|gb|AAA23161.1| aminoacyl-tRNA synthetase [Chlamydia trachomatis]
 gi|289525435|emb|CBJ14912.1| prolyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434987|gb|ADH17165.1| prolyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438707|gb|ADH20860.1| prolyl-tRNA synthetase [Chlamydia trachomatis E/11023]
 gi|745528|prf||2016314B AA-tRNA synthetase
          Length = 581

 Score = 46.8 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN- 67
            +  +G         R+  ++ + IR      G   +  PLL+ ++   K    +   + 
Sbjct: 33  FKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKAFLSE 92

Query: 68  KGVFSLQDDDGQWISLRY 85
           K ++ L+D + + + L  
Sbjct: 93  KLLYVLKDRENEAMCLAP 110



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 84/292 (28%), Gaps = 21/292 (7%)

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           +                ++     +D  +    + +   L   +      +        E
Sbjct: 291 EKFFAICIRGDRQINLTKVASFLQVDDCELASEEEILKHLHVEKGFIGPLYCPIPCYADE 350

Query: 236 QIDIMVSFLSIDLEKSMHE-LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
              +M +F+  + +K +H       +       G   L    +L  ++G     I     
Sbjct: 351 TTRLMTNFICANNQKDVHCKHVNWGRDIPLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVE 410

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +       T       +GF   N  ++    G+ G G                       
Sbjct: 411 VAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIG------------------VGRTL 452

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
            + +     +             + I     D++  +      Q L T G    +   + 
Sbjct: 453 AACIEQLADNKGLVWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLDDRNE 512

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +  G +LK +D    P  +I G   +S G+L+I+    G++ +   +N   W
Sbjct: 513 R-LGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIES-RSGEKCNVSPENLLDW 562


>gi|86742091|ref|YP_482491.1| threonyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86568953|gb|ABD12762.1| threonyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 438

 Score = 46.8 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           G          +R+ + + IR +    G+  + +P+L   +   +           +F 
Sbjct: 22 SGLPYWLPAGAVVRHTLEEYIRGVERRAGYRHVYSPVLGKRELY-EISGHWSHYRDDMFP 80

Query: 73 LQDDDGQWIS 82
            D  G+ + 
Sbjct: 81 PMDLSGERLG 90


>gi|319942329|ref|ZP_08016644.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804202|gb|EFW01102.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 636

 Score = 46.8 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 41/145 (28%), Gaps = 9/145 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +R +Y++ G++ ++ P L       +      +    +F+ 
Sbjct: 261 GMVFWHAKGWALWQVIEQFMRRVYQDNGYEEVKAPQLLDRSLWERS-GHWAKYRDNMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + ++ +L+             +        R+YR  P+   E     R         
Sbjct: 319 TESENRYYALKPMNCPG-------HIQIFNSKLRSYRDLPLRIGEFGQCHRNESSGSLHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAV 158
                     D  +       L   
Sbjct: 372 LMRVRGFTQDDGHIFCTEDQILAEC 396



 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+         +  +  +     L  AG+R +  L S K    +++    +  P  +
Sbjct: 535 WLAPIQCAVTSITDNQGAYAKDVAAKLHAAGLRVQTDLRSEK-INYKIRELSLQKLPYIL 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  E   G + ++
Sbjct: 594 VVGEKEAQTGTVSVR 608


>gi|281420331|ref|ZP_06251330.1| proline--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405633|gb|EFB36313.1| proline--tRNA ligase [Prevotella copri DSM 18205]
          Length = 493

 Score = 46.8 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 80/302 (26%), Gaps = 43/302 (14%)

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
              + + +L  +       +      L +        FL  +   +     E        
Sbjct: 140 HSWRDLPILCNQWCNVMRWEMRTRPFLRTS------EFLWQEGHTAHATKEEAEAKAQEM 193

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
            K + E                   + S   R          EA++      +       
Sbjct: 194 LKVYAEFA------ENYMGVPVLQGVKSETERFAGALNTYTIEAMMQDGKALQSGTSHFL 247

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLI 380
           G           +++               +RL+ AL                    V+I
Sbjct: 248 GQNFAKSFDVTYLNKENKPEYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVVI 307

Query: 381 TTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAII 434
             ++   + L+    K Q     LR  GI  +     +K  G   K+AD   +  P+ + 
Sbjct: 308 VPINKGDEQLAQITAKLQPVIDQLRELGITVKYDDNPAKRPG--FKFADYELKGVPVRLA 365

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
            G  +     ++I                   R   + +  +    +V  VK +L++ ++
Sbjct: 366 MGGRDLENNTIEI------------------MRRDTLEKENVSFDGIVELVKNMLEDIQK 407

Query: 495 EI 496
            I
Sbjct: 408 NI 409


>gi|118462301|ref|YP_882672.1| threonyl-tRNA synthetase [Mycobacterium avium 104]
 gi|254775941|ref|ZP_05217457.1| threonyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|166225462|sp|A0QID4|SYT_MYCA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118163588|gb|ABK64485.1| threonyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 684

 Score = 46.8 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 42/115 (36%), Gaps = 11/115 (9%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY-ADRRNCPLA 432
            + PV    +    + +   +     L++ G+R E+     +     + + A +   P  
Sbjct: 569 WLAPVQAVGIPVADEHVPYLESVAAQLKSHGVRVEVDASDDRMAKKIVHHTAQK--VPFM 626

Query: 433 IIQGTGERSRGMLQIKDLAKGKEL-----SREIKNNESWREARVAQITIPISELV 482
           ++ G  + + G +  +      ++        +     W   R  + ++P +ELV
Sbjct: 627 LLAGDRDVAAGAVSFR-FGDRTQINGVPRDSAVDAIVKWIADR--ENSVPSAELV 678


>gi|310823910|ref|YP_003956268.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309396982|gb|ADO74441.1| Threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 397

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G      +   +   + + +R    + G+  + TP +     + +          G+F L
Sbjct: 25 GMVFWHPRGFVLYQLLEERVRRELASGGYREVRTPQV-LGQRIWESSGHWQNFRHGMFVL 83

Query: 74 QDDDGQWISLRY 85
           DD  +  +++ 
Sbjct: 84 -DDGERPFAMKP 94



 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 71/247 (28%), Gaps = 11/247 (4%)

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV 274
           L +   D+   F     +  E      S  +        +         A   G + L  
Sbjct: 139 LRQFTQDDGHIFCMEEQVADEVAAFCRSLRAFYRGFGFEDAQVAFSSRPAQRAGDDALWD 198

Query: 275 ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY 334
            +E           +        G  Y      E IL      + Q   +        R+
Sbjct: 199 RAEAALLEAAGRVGLDCRMQPGEGAFYG--PKLEFILKDRSGRDWQCGTIQLDFVLPERF 256

Query: 335 D-----GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
           D         + +   +    F      L + L+  +           V +  +   +DS
Sbjct: 257 DLHYVDSGGEKRRPAMLHRAIFGSVERFLGILLEHHQGVLPAWLAPEQVRVLPVG--ADS 314

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
            +      + L  AG+R E      +    ++  A +   P A++ G  E++   +QI++
Sbjct: 315 HAYAAEVQEHLLAAGLRVE-ADARGETLSRRILEAHQDAVPFAVLVGPREQAGRSIQIRE 373

Query: 450 LAKGKEL 456
              G + 
Sbjct: 374 -RGGAQR 379


>gi|193216690|ref|YP_001999932.1| glycyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002013|gb|ACF07228.1| glycyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 463

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 30/99 (30%), Gaps = 3/99 (3%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-IRAEMFLGSSKNFGNQLKYADRRN 428
           +    + P  +           K +     L     IR  +    S + G + +  D   
Sbjct: 360 HLNYNIAPYQLAIFPLTKALAPKAREIYDELIDKSTIR--LVYDESGSIGKRYRRQDAIG 417

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            P A+         G + I++    K++   I    ++ 
Sbjct: 418 TPFALTVDHESLETGTVTIRERDTMKQIRINISEIVNYL 456


>gi|156974364|ref|YP_001445271.1| threonyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166225516|sp|A7N009|SYT_VIBHB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|156525958|gb|ABU71044.1| hypothetical protein VIBHAR_02079 [Vibrio harveyi ATCC BAA-1116]
          Length = 642

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 79/265 (29%), Gaps = 10/265 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   + +  E  + +              +   +        G +E+   SE   
Sbjct: 383 DDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDNIVVKLSTRPEKRVGSDEIWDQSEEAL 442

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYD 335
           K    S  I        G  Y     +        ++   +              G  Y 
Sbjct: 443 KQSLESMEIPYEIQEGEGAFYGPKIEFTLY---DCLDRAWQCGTVQLDFNLPGRLGATYV 499

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G  +      +        + R I  L    +       + P  +  M+         Q 
Sbjct: 500 GENNERLVPVMIHRAILGSLERFIGILIEEYAGFFP-TWLAPEQVILMNITDKQSDYVQE 558

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             Q L+ +GIRA+  L  ++  G +++    +  P  ++ G  E   G + ++       
Sbjct: 559 VVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDL 617

Query: 456 LSREIKNNESWREARVAQITIPISE 480
              ++ +  ++ +  ++   + + E
Sbjct: 618 GKFKVDDFIAYIQDEISIRKLNLEE 642



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 45/152 (29%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +L+        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   + + ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQEEVTNCIKMV 405


>gi|315427003|dbj|BAJ48621.1| glycyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315428091|dbj|BAJ49678.1| glycyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 482

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 39/134 (29%), Gaps = 12/134 (8%)

Query: 346 VPATGFSIGISRLIVALKSLE---------SSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
                 S+G+ R ++AL                +       + +  +    +     Q  
Sbjct: 349 PHVFELSMGVDRSLLALLEHGYVQENGRSVLRLHPALAPYTIAVFPLLDRPELTQVAQQL 408

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L+   +  + F     + G + +  D    P  I           + ++D    K+ 
Sbjct: 409 YNKLQ---LDFDTFYDEKGSIGRRYRRQDEIGTPFCITVDYQTLEDNTVTVRDRDTMKQE 465

Query: 457 SREIKNNESWREAR 470
              I+  +S+   +
Sbjct: 466 RVNIEVLKSYISDK 479


>gi|290994751|ref|XP_002679995.1| predicted protein [Naegleria gruberi]
 gi|284093614|gb|EFC47251.1| predicted protein [Naegleria gruberi]
          Length = 528

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 28/106 (26%), Gaps = 6/106 (5%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDS---DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +          ++ P             + +SK +     L +           S + G 
Sbjct: 414 EEKRVVLKIHPDLAPYKFAVFPLQKKPVELMSKAEEIYSQLAS---VVSTDYDVSSSIGV 470

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             +  D    P  I           + ++D    K++   I +  +
Sbjct: 471 LYRRHDEIGTPYCITIDHQTLKDNTVTVRDRDTMKQIRMNINDIVT 516


>gi|157564|gb|AAA28594.1| transfer RNA-Glu-Pro aminoacyl synthetase [Drosophila melanogaster]
 gi|1871360|gb|AAC47469.1| glutamyl-prolyl-tRNA synthetase [Drosophila melanogaster]
          Length = 1714

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 51/159 (32%), Gaps = 22/159 (13%)

Query: 348  ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTA 403
                      ++V   +              ++           D  ++     + L   
Sbjct: 1474 GITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTKDDERAQLLDACKALEKR 1533

Query: 404  ----GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSR 458
                G+R E     + + G +  + + +  PL +  G  +      + ++    G++++ 
Sbjct: 1534 LVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDLKAQQLVAVR-RDTGEKITI 1592

Query: 459  EIKNNESWREARVAQITIPISELVSTVKK-ILQENKEEI 496
             + + E             I  L+ T+ + +L + +E++
Sbjct: 1593 PLADVEK-----------KIPALLETIHESMLNKAQEDM 1620


>gi|194289383|ref|YP_002005290.1| threonyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|238692758|sp|B3R4J1|SYT_CUPTR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|193223218|emb|CAQ69223.1| threonine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 635

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/96 (9%), Positives = 28/96 (29%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   +   +R    + G+D + TP +       K         + +F +
Sbjct: 261 GMVFWHPKGWQVWQAVEQYMRGRLTDAGYDEVRTPQVMDRSLWEKS-GHWQNYKENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
            + + +  +++        +    +           
Sbjct: 319 TESEKRDYAIKPMNCPGHVQIF-NHGLRSYRDLPLR 353



 Score = 38.3 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M+         +   Q+L+  G RA+  L  ++    +++    +  P  ++ G  
Sbjct: 540 QVVVMNIADSQAEYAESVVQLLQKQGFRAKADL-RNEKITYKIREHSLQKVPYLLVVGDK 598

Query: 439 ERSRGMLQIK 448
           ER    + ++
Sbjct: 599 ERDANQVAVR 608


>gi|47479652|gb|AAH69346.1| TARSL2 protein [Homo sapiens]
 gi|47480952|gb|AAH69811.1| TARSL2 protein [Homo sapiens]
          Length = 466

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 34/116 (29%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 317 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 376

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +      G  A++ L  S     +++ A        ++ G  E+    + ++
Sbjct: 377 ALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVR 432



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 88  FLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 146

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 147 D-TFALKPMNCPGHCLMFAHR 166


>gi|20807458|ref|NP_622629.1| glycyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|59798595|sp|Q8RB46|SYG_THETN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|20515983|gb|AAM24233.1| Glycyl-tRNA synthetase, class II [Thermoanaerobacter tengcongensis
           MB4]
          Length = 461

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/185 (10%), Positives = 42/185 (22%), Gaps = 5/185 (2%)

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
                                Y+  L   + +  +       V G       +    G +
Sbjct: 279 DIEYNFPFGWGELWGIANRTDYD--LRQHMEHSGEDMTYTDPVTGEKYIPYCIEPSVGVD 336

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
                F +                     + PV +                   L     
Sbjct: 337 RLMLAFLVDAYDEEEVEGETRVVLRLHPAIAPVKVAVFPLSKKLNEAAYKIYLDL-KKKF 395

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            AE     S + G + +  D    P  +       +   + I+D    +++  +I   + 
Sbjct: 396 PAE--YDESGSIGRRYRRQDEIGTPFCVTYDFDSENDHKVTIRDRDTMEQIRIDIDQVDK 453

Query: 466 WREAR 470
           + E +
Sbjct: 454 YLEEK 458


>gi|317013684|gb|ADU81120.1| prolyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 577

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +      ++ ++I +      + +G   I         SL +     D+  K +  
Sbjct: 37  SGIYNFLPLAKKVLDKIENVTHKRMQEHGAQNILM-SFVVLASLWEKSGRLDKYGKELLV 95

Query: 73  LQDDDGQWISLRY 85
            +D       L  
Sbjct: 96  FKDRKDNDFVLSP 108



 Score = 43.7 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 25/149 (16%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+   +        T N      V++ +   D           + L   
Sbjct: 448 CYGIGISRLLSAILEQKSDDLGCVWTKNTAPFDVVIVVSNLKDEAQKKLAFEVYERLLQK 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G+   +    ++ FG +++  +     LA+I G                           
Sbjct: 508 GVDVLLDDRDAR-FGAKMRDFELIGERLALIVGKQTLESKEF------------------ 548

Query: 464 ESWREARVAQITIPISELVSTVKKILQEN 492
           E  + A + + TI  +EL   + ++L+  
Sbjct: 549 ECIKRANLEKQTIKDTELEEKILEMLESE 577


>gi|315222088|ref|ZP_07863998.1| prolyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188838|gb|EFU22543.1| prolyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 619

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 45/144 (31%), Gaps = 5/144 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+  +    +R  +E  G   +  P L  +D L +     +   + 
Sbjct: 34  QISAGVYSYLPLANRVIEKAKKIMREEFEKIGAVEMLAPALLSAD-LWRESGRYETYGED 92

Query: 70  VFSLQDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ L++ +G    L    + T   + R   +++  +       +       ++   G  R
Sbjct: 93  LYKLKNREGSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQ-AKYRDEKRPRNGLLR 151

Query: 127 QFIQCDVDNVGSSAETADAEMCMM 150
                  D     A     ++   
Sbjct: 152 TREFIMKDGYSFHANYDSLDVTYD 175


>gi|86749289|ref|YP_485785.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86572317|gb|ABD06874.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
           [Rhodopseudomonas palustris HaA2]
          Length = 661

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 95/356 (26%), Gaps = 19/356 (5%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
              S       E         E    KR      +N    +      +  + D  L    
Sbjct: 307 WETSGHWEWYRENMFAAQSAGEDAEDKRWFALKPMNCPGHVQIFKHGLKSYRDLPLRMAE 366

Query: 195 I--VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
              V R        GL  V+        D++  F   A L  E + I    +S   +   
Sbjct: 367 FGVVHRYEPSGAMHGLMRVRG----FTQDDAHVFCTEAQLADECMKINDLIMSTYSDFGF 422

Query: 253 HELYE-LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE----YYTGCVY 307
                  +        G +E+   +E V  +  +  + + S+ I   +      + G  +
Sbjct: 423 DGELTVKLSTRPDKRVGTDEMWDHAERVMATVLSEIKAQGSNRIKTEINPGEGAFYGPKF 482

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALK 363
           E +L   +  + Q            R+        G               + R I  L 
Sbjct: 483 EYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGAKKAPVMVHRAICGSMERFIGILI 542

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLK 422
              +    +  + PV +      S+     +      R AG+R ++ L + K N     +
Sbjct: 543 EHFAGNFPLW-LAPVQLVVATITSEGDEYAKQVVAAARRAGLRVDIDLRNEKINLKV--R 599

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
                  P  ++ G  E     + ++ L    +         +          +  
Sbjct: 600 EHSLAKVPALLVVGKKEAETHSVSVRRLGSDGQTVMPTAEAIAALVDEATPPDVRR 655


>gi|38570111|ref|NP_689547.2| probable threonyl-tRNA synthetase 2, cytoplasmic [Homo sapiens]
 gi|189083596|sp|A2RTX5|SYTC2_HUMAN RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|119622721|gb|EAX02316.1| threonyl-tRNA synthetase-like 2 [Homo sapiens]
 gi|124376838|gb|AAI32672.1| Threonyl-tRNA synthetase-like 2 [Homo sapiens]
 gi|187953219|gb|AAI36316.1| Threonyl-tRNA synthetase-like 2 [Homo sapiens]
          Length = 802

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 34/116 (29%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 653 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 712

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +      G  A++ L  S     +++ A        ++ G  E+    + ++
Sbjct: 713 ALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVR 768



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 424 FLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 482

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 483 D-TFALKPMNCPGHCLMFAHR 502


>gi|114563199|ref|YP_750712.1| threonyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299726|sp|Q082E1|SYT_SHEFN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114334492|gb|ABI71874.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella
           frigidimarina NCIMB 400]
          Length = 642

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/369 (10%), Positives = 95/369 (25%), Gaps = 14/369 (3%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                  + +     +        +      A+ +     +  +Y I   N      I  
Sbjct: 283 QKLGQYTYQEVKGPLMMDRVLWERSGHWDKYAEAMFTTNSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     +  E    +
Sbjct: 343 QGLKSYRDLPLRMAEFGCCHRNEPSGSLHGL-MRVRGFTQDDAHVFCTDDQVQEEVSACI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                         +   +        G +++   +E   K    +N IK       G  
Sbjct: 402 QMVYDTYATFGFDNIVVKLSTRPEKRIGDDDMWDRAEDALKQALANNNIKYEILPGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGI 355
           Y     +        ++   +              G  Y    +  +   +        +
Sbjct: 462 YGPKIEF---TLHDCLDRAWQCGTVQLDYALPTRLGATYVAEDNSRQTPVMIHRAILGSL 518

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R I  L    +       + P+ +  M+         +   +  +  GIRA   L  ++
Sbjct: 519 ERFIGILIEEYAGKFP-TWLAPMQVVVMNITDKQADYVEEIVKFFKEQGIRASFDL-RNE 576

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +++    R  P  ++ G  E     + ++       +       E +      QI+
Sbjct: 577 KIGFKIREHTLRRVPYLLVVGDQEMENKEVAVR---TRDGIDLGKLKLEDFAAMIRQQIS 633

Query: 476 IPISELVST 484
           +   +L+  
Sbjct: 634 LRSLKLLEE 642



 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/208 (9%), Positives = 56/208 (26%), Gaps = 11/208 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSIFLELEKFIRQKLGQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+  + + +  +++        +   +   +                 +       
Sbjct: 314 AEAMFT-TNSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     D ++   ++  +                    D I+ K+    
Sbjct: 373 LMRVRGFTQDDAHVFCTDDQVQEEVSACI--------QMVYDTYATFGFDNIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLL 214
           + ++ +  +  RA D L +         
Sbjct: 425 EKRIGDDDMWDRAEDALKQALANNNIKY 452


>gi|300780725|ref|ZP_07090579.1| glycine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532432|gb|EFK53493.1| glycine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 460

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 28/97 (28%), Gaps = 3/97 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  +    +     +     LR       +   +S   G + +  D    P  +
Sbjct: 363 SPIKVAVLPLSKKPELSGPAEELAATLRQH-WS--IDYDTSGAIGRRYRRQDEIGTPFCV 419

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                      + +++    ++    +   ES+  AR
Sbjct: 420 TFDFDSLEDKAVTVRERDTMEQERVPLDELESYLAAR 456


>gi|16553656|dbj|BAB71554.1| unnamed protein product [Homo sapiens]
          Length = 433

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 34/116 (29%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 284 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 343

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +      G  A++ L  S     +++ A        ++ G  E+    + ++
Sbjct: 344 ALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVR 399



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 2/92 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 55  FLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 113

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
               +L+           A    +        
Sbjct: 114 D-TFALKPMNCPGHCLMFAHRPRSWREMPIRC 144


>gi|167747292|ref|ZP_02419419.1| hypothetical protein ANACAC_02006 [Anaerostipes caccae DSM 14662]
 gi|167653270|gb|EDR97399.1| hypothetical protein ANACAC_02006 [Anaerostipes caccae DSM 14662]
          Length = 478

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 58/188 (30%), Gaps = 11/188 (5%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                F     K   + +       +Y    S      +      +      + L     
Sbjct: 231 GTSHNFGDGFAKAFDIQYTDKNNKLQYVHQTSWGMSTRIIGAIIMVHGDDSGLVL----- 285

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I  +  +++  M      L K +   + L +   + ++   S K+ G +    + +
Sbjct: 286 -PPKIAPVQTMIVPIMQKKEGVLEKAEEIRECL-SKNYKVKVD-DSDKSPGWKFSEQEVQ 342

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P  I  G  +  +    I      +++   +   ES     + Q+     +++   KK
Sbjct: 343 GIPTRIEIGPKDIEKNQAVIVRRDTREKIFVSLDEIESKLSEVLDQM---QKDMLERAKK 399

Query: 488 ILQENKEE 495
            L+EN  E
Sbjct: 400 HLEENTHE 407


>gi|310659541|ref|YP_003937262.1| prolyl-tRNA synthetase 2 [Clostridium sticklandii DSM 519]
 gi|13633967|sp|Q9L4Q8|SYP_CLOSD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|6899998|emb|CAB71307.1| prolyl tRNA synthetase [Clostridium sticklandii]
 gi|308826319|emb|CBH22357.1| Prolyl-tRNA synthetase 2 (Proline--tRNA ligase 2) (ProRS 2)
           [Clostridium sticklandii]
          Length = 481

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 27/79 (34%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              +     V+I    +    L K     + L   GIR  +   ++ + G +    + + 
Sbjct: 287 PPRVAPTQVVIIPIAQNKEGVLDKAYEIKKELEAKGIRVTLDDDTNYSPGWKFNQYEMKG 346

Query: 429 CPLAIIQGTGERSRGMLQI 447
            PL +  G  +    +  I
Sbjct: 347 VPLRLEIGPRDIENNVAMI 365


>gi|254995424|ref|ZP_05277614.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str.
           Mississippi]
          Length = 636

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/255 (9%), Positives = 74/255 (29%), Gaps = 14/255 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I   I + IR   + +G+  ++TP++     L +     ++  + +F ++D D
Sbjct: 267 WHDKGWVIYRIIEEYIRCKLKKHGYHEVKTPIM-LDRKLWEKSGHWEKFKENMFVVED-D 324

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++        +       +            +    +     +            
Sbjct: 325 KKELAIKPMNCPCHVQIFKSKIRSYKELPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDD 384

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +       ++   +    E +     D+              + + +   D+   R+   
Sbjct: 385 AHIFCTHEQVRDEVLRFYELLMEVYKDFG------------FDSVTVKLSDRPENRIGSD 432

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ ++  ++ +  L  +   +       G  L     D +         +    L +
Sbjct: 433 EIWDRSEQSLMEPMNALGVQYTINKGEGAFYGPKLEFTLKDSIGREWQCGTVQLDFVLPD 492

Query: 258 LVKGTIAGEKGFNEL 272
            +     GE G   +
Sbjct: 493 RLGAYYIGEDGKKHI 507


>gi|91793061|ref|YP_562712.1| threonyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060978|sp|Q12NI7|SYT_SHEDO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|91715063|gb|ABE54989.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella
           denitrificans OS217]
          Length = 642

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/333 (11%), Positives = 88/333 (26%), Gaps = 11/333 (3%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                  + +     +   A    +      +D +     +  +Y I   N      I  
Sbjct: 283 QKLGQYTYQEVKGPLMMDRALWERSGHWDKYSDAMFTTNSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     +  E  D +
Sbjct: 343 QGLKSYRDLPLRMAEFGCCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTDDQVQKEVSDCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                         +   +        G +++   +E   K    +N I+       G  
Sbjct: 402 QMVYDTYATFGFENIVVKLSTRPEKRIGDDDMWDRAEEALKQALIANEIEFEILPGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGI 355
           Y     +        ++   +              G  Y    +  +   +        +
Sbjct: 462 YGPKIEF---TLHDCLDRAWQCGTVQLDYALPSRLGATYVAEDNTRQTPVMIHRAILGSL 518

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R +  L    +       + P+ +  M+         Q   ++ +  GIRA   L  ++
Sbjct: 519 ERFLGILIEEYAGKFP-TWLAPMQVVVMNITDKQADYVQDVVKIFKEQGIRASFDL-RNE 576

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             G +++    R  P  ++ G  E     + ++
Sbjct: 577 KIGFKIREHTLRRVPYLLVVGDQEMENKEVAVR 609



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/199 (8%), Positives = 56/199 (28%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR     Y +  ++ PL+       +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDRALWERS-GHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  +F+  + + +  +++        +   +   +                 +       
Sbjct: 314 SDAMFT-TNSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     D ++   ++D +                    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTDDQVQKEVSDCI--------QMVYDTYATFGFENIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++ +  +  RA + L +
Sbjct: 425 EKRIGDDDMWDRAEEALKQ 443


>gi|297620081|ref|YP_003708186.1| glycyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379058|gb|ADI37213.1| glycyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 584

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 2/90 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  + +        +   + LR +GI AE     S   G +    D    P  I      
Sbjct: 494 VFPLVNKEQMPIIAREIEETLRNSGIIAE--YDDSGAIGRRYLRMDEVGTPFCITVDGES 551

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREA 469
              G + I++  +  +   +I+    +   
Sbjct: 552 LDSGTVTIRERDERTQKRLKIEELGEYINN 581



 Score = 41.4 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
          GF D       ++N I+++ R  Y  N GF  IE P +   + L    
Sbjct: 35 GFFDYGPLGAILKNNIVNTWRKHYIINEGFYEIEGPTINPYEVLKASG 82


>gi|315634189|ref|ZP_07889478.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477439|gb|EFU68182.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 643

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 42/356 (11%), Positives = 93/356 (26%), Gaps = 8/356 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +                D +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        ++  +        G +E+   +E    +    N ++       G  
Sbjct: 402 RMVYDIYSTFGFTNIFVKLSTRPEKRIGADEMWDRAEEGLANALKHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     +          +    +       G      V+    +  P       +G    
Sbjct: 462 YGPKIEFALRDCLDREWQCG-TIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L  AG+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQSEYVQQVAKQLSDAGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +++    R  P  ++ G  E   G + ++     K         E + E    Q+
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIEAGKVAVR---TRKGQDLGTFTVEEFLEILKKQV 632



 Score = 40.2 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/167 (7%), Positives = 41/167 (24%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 GDLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   +  V    + +       K
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFTNIFVK 419


>gi|300716458|ref|YP_003741261.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062294|emb|CAX59411.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 642

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 45/347 (12%), Positives = 92/347 (26%), Gaps = 10/347 (2%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +                + +     +  +Y I   N      I  +      D       
Sbjct: 298 MMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 357

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F     + +E    +     +       ++
Sbjct: 358 FGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQVRTEVNSCIRMVYDMYSTFGFEKI 416

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G  E    +E    +    N I        G  Y     +        
Sbjct: 417 VVKLSTRPVKRIGTEEQWDRAEADLAAALKENDIPFEYQPGEGAFYGPKIEFTLHDCLDR 476

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIK 373
             +    V              +     + VP       +G     + + + E +     
Sbjct: 477 AWQCG-TVQLDFSLPSRLSASYIGENNERQVPVMIHRAILGSVERFIGILTEEYAGFFPT 535

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+            T+ L+ AGIRA+  L  ++  G +++    R  P  +
Sbjct: 536 WLAPVQVVVMNITDGQSEYVAELTRKLQNAGIRAKADL-RNEKIGFKIREHTLRRVPYML 594

Query: 434 IQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           + G  E   G + +     KDL          K  +  R   + Q+ 
Sbjct: 595 VCGDKEVESGKVAVRTRRGKDLGSMDVNEVIAKLQDEIRSRNLHQLE 641



 Score = 38.3 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/155 (7%), Positives = 39/155 (25%), Gaps = 3/155 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+    Y +  ++ PL+     L +     +  
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELEVFVRSKLTEYDYQEVKGPLMMDR-VLWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KEAMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                      +     + ++   +   +  V   
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVRTEVNSCIRMVYDM 407


>gi|293392211|ref|ZP_06636545.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952745|gb|EFE02864.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 643

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/356 (11%), Positives = 90/356 (25%), Gaps = 8/356 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +                D +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTSSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCMPDQVESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +        G +E+   +E         N +        G  
Sbjct: 402 KMVYDIYSTFGFENIKVKLSTRPEKRIGSDEMWDKAEADLAKALEHNGLSYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     + A+        +   +              V     + +P       +G    
Sbjct: 462 YGPKLEF-ALTDSLDREWQCGTIQLDFFLPERLNASYVGEDNERKIPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L  AG+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPVWLAPTQAVVMNITDSQSEYVQKVAKQLSDAGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +++       P  ++ G  E   G + ++     K         E + +    Q+
Sbjct: 580 FKIREHTLHRVPYMLVCGDKEIEAGKVAVR---TRKGQDLGTFTVEEFLDILKKQV 632



 Score = 41.0 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 10/152 (6%), Positives = 36/152 (23%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 314 GDLMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +       ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCMPDQVESEVTSCIKMV 404


>gi|255282516|ref|ZP_05347071.1| glycine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266809|gb|EET60014.1| glycine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 465

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 32/102 (31%), Gaps = 3/102 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV I  +          +     L +     E       N G + +  D    
Sbjct: 365 HFHPVLAPVKIGVLPLSKKLNEGAEKIFAQL-SKKYNCEFD--DRGNIGKRYRRQDEIGT 421

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           P  +       + G + ++D    +++  +I   E++   + 
Sbjct: 422 PFCVTYDFESETDGAVTVRDRDTMEQVRVKIDELEAYFADKF 463


>gi|212224027|ref|YP_002307263.1| ATP phosphoribosyltransferase [Thermococcus onnurineus NA1]
 gi|212008984|gb|ACJ16366.1| ATP phosphoribosyltransferase [Thermococcus onnurineus NA1]
          Length = 295

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 81/244 (33%), Gaps = 25/244 (10%)

Query: 16  ADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQD 75
            D    E      I   +R  +E +G+  +  P +E      +F  +  +  K V+    
Sbjct: 3   KDLL-SESERLADITKYLRRTFELWGYREVFLPTIE------EFSEELRKGTKFVY---- 51

Query: 76  DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDN 135
            D ++  ++ DLT+ +               + Y I  V      G        Q  V+ 
Sbjct: 52  -DNEFYVIKPDLTSQIL-----ANLKEPRRLKLYYISEVLDGGIRGK------WQAGVEF 99

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +G        E+ + +  +LEA+G    D++I + + KI +  ++ I     +       
Sbjct: 100 IGGEDIKMQVEVLLTVITSLEALG--IEDFYIDVGSLKIWESAIKGIEEFRAEIFRALTR 157

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
               I +      +  + L             K  N   + +D    F+     + +   
Sbjct: 158 RNFEIIERLPISEEKKEELWQLFNFRGKSCGYKKLNKIIDALDDRRVFIDFGTIRPLPYY 217

Query: 256 YELV 259
            +++
Sbjct: 218 SDVI 221


>gi|195504997|ref|XP_002099319.1| GE10841 [Drosophila yakuba]
 gi|194185420|gb|EDW99031.1| GE10841 [Drosophila yakuba]
          Length = 996

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 51/159 (32%), Gaps = 22/159 (13%)

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTA 403
                     ++V   +              ++           D  ++     + L   
Sbjct: 756 GLTTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTKDDERAQLLDACKALEKR 815

Query: 404 ----GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSR 458
               G+R E     + + G +  + + +  PL +  G  +      + ++    G++++ 
Sbjct: 816 LVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDLKAQQLVAVR-RDTGEKITI 874

Query: 459 EIKNNESWREARVAQITIPISELVSTV-KKILQENKEEI 496
            + + E             I  L+ T+   +L++ +E++
Sbjct: 875 PLADVEK-----------KIPALLETIHTSMLKKAEEDL 902


>gi|237785257|ref|YP_002905962.1| glycyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758169|gb|ACR17419.1| glycyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 460

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 29/95 (30%), Gaps = 3/95 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +          +   Q LR  G+   +    S   G + +  D    P  +    
Sbjct: 367 VAVLPLSKKDTLTPTAEKVAQDLR--GLW-NVDYDISGAIGRRYRRQDEIGTPFCVTVDF 423

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  + +++    ++    I   + +   R+A
Sbjct: 424 DTLDDHAVTVRERDTMEQERVSIDKLQGYLAERLA 458


>gi|195144990|ref|XP_002013479.1| GL24160 [Drosophila persimilis]
 gi|194102422|gb|EDW24465.1| GL24160 [Drosophila persimilis]
          Length = 1725

 Score = 46.4 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 377  PVLITTMDHDSD---SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            P  IT    D +    L   +   Q L  AG+R E     + + G +  + + +  PL +
Sbjct: 1519 PCGITVNTKDEERAQLLDACKKLEQTLVGAGVRCEGDYRDNYSPGWKFNHWELKGVPLRL 1578

Query: 434  IQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK-KILQE 491
              G  +      + ++    G++++  + + E             IS L+ T+   +L +
Sbjct: 1579 EVGPKDLKAQQLVAVR-RDTGEKITLPLADVEK-----------KISALLETIHGSMLAK 1626

Query: 492  NKEEI 496
             + ++
Sbjct: 1627 AQADL 1631


>gi|329934676|ref|ZP_08284717.1| glycyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329305498|gb|EGG49354.1| glycyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 460

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  + +   K +   Q LR      E     +   G + +  D    P  +    
Sbjct: 367 VAVLPLSRNPELSPKAKGLAQALR-QNWNIEFD--DAGAIGRRYRRQDEIGTPFCVTVDF 423

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    K+    +   E +  +R
Sbjct: 424 DTLEDNAVTVRERDSMKQERVSLDQIEGYLGSR 456


>gi|209879794|ref|XP_002141337.1| threonyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209556943|gb|EEA06988.1| threonyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 743

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N++++ IR+ Y   GF+ + TP +   D L K         + +F  + + 
Sbjct: 354 WLPPGARIYNKMIEFIRSEYRIRGFEEVVTPNIFSCD-LWKTSGHYFAYKENMFLFEVEK 412

Query: 78  GQWISLRYDLTAP 90
            +W  L+      
Sbjct: 413 KEW-GLKPMNCPG 424



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 68/248 (27%), Gaps = 24/248 (9%)

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI---VRGL 299
           +L    ++ +    +      + +   N      ++    G                R  
Sbjct: 506 YLGTMPKEHLGTREKWEDAENSLKLALNRTGYQWKVNEGDGAFYGPKIDIMLWDALKRPH 565

Query: 300 EYYT-GCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           +  T    ++  + F +           + GG    D  +     + V      +G    
Sbjct: 566 QCGTIQLDFQLPIRFNLQYRSDD--NILTEGGDHNLDEELKPGYKRPVIIHRAILGSIER 623

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           +VA+    +       + P     +     S    +     L   G        SS    
Sbjct: 624 MVAVILENTGGKLPFWLSPRQAIVLPISEKSHDYAKSIESELCCMGYDVGADYSSS-TIN 682

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++ A        +I G  E   G + ++                  R++  +Q  + +
Sbjct: 683 RKIREAQLLQWNFMLIVGENEAKSGSITVRS-----------------RDSSTSQRNMIL 725

Query: 479 SELVSTVK 486
           S+L++  K
Sbjct: 726 SDLIAEFK 733


>gi|50959620|gb|AAH74887.1| TARSL2 protein [Homo sapiens]
          Length = 441

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 40/148 (27%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+ S          + P  +  +         
Sbjct: 292 TYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKY 351

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
               +      G  A++ L  S     +++ A        ++ G  E+    + ++    
Sbjct: 352 ALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTRDN 411

Query: 453 GKELSREIKNNESWREARVAQITIPISE 480
                  + +     +      T+   E
Sbjct: 412 KIHGEILVTSAIDKLKNLRKTRTLNAEE 439



 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 63  FLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 121

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 122 D-TFALKPMNCPGHCLMFAHR 141


>gi|46125161|ref|XP_387134.1| hypothetical protein FG06958.1 [Gibberella zeae PH-1]
          Length = 663

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 1/95 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            S   I     VL+  +  +       +  +Q LR+AGI + +   SS + G +    D 
Sbjct: 534 LSFPPIVAPTKVLLVPLSSNPQFKPLLKQLSQRLRSAGISSRVD-DSSASIGKRYSRNDE 592

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              PL I         G + ++D     ++  E +
Sbjct: 593 LGTPLGITIDFQTAQDGSVTLRDRDSTNQVRAEQE 627


>gi|288801976|ref|ZP_06407417.1| proline--tRNA ligase [Prevotella melaninogenica D18]
 gi|302347070|ref|YP_003815368.1| proline--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|288335411|gb|EFC73845.1| proline--tRNA ligase [Prevotella melaninogenica D18]
 gi|302151118|gb|ADK97379.1| proline--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 493

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 71/257 (27%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L V ++   K         + S   R          EA+
Sbjct: 173 WQEGHTAHATREEAEKEAQTMLRVYADFAEKWLAVPVVQGVKSETERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           +++               +RLI AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGVSTRLIGALIMTHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L     K Q     LR  GI  +     +K  G   
Sbjct: 293 GLVLPPKIAPIQVVIVPIFKGEEQLKALTDKLQPVIDQLRALGITVKYDDADNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+AD   +  P+ +  G  +     +++                   R   + + ++   
Sbjct: 351 KFADYELKGVPVRLAMGGRDLENNTIEV------------------MRRDTLEKESVSFD 392

Query: 480 ELVSTVKKILQENKEEI 496
            +V  +K +L E ++ I
Sbjct: 393 GIVERIKNLLDEIQDNI 409


>gi|116753590|ref|YP_842708.1| glycyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121693195|sp|A0B5U4|SYG_METTP RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|116665041|gb|ABK14068.1| glycyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 577

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 31/99 (31%), Gaps = 2/99 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V I  +    + +   +      R  G+ AE    +S + G + +  D    P  I
Sbjct: 467 SPIDVAILPLMDKDELVEPARRIFDEFRRCGMLAEFD--TSGSIGRRYRRNDEIGTPYCI 524

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                    G + ++D    +++  E           ++
Sbjct: 525 TVDYQTLEDGTVTVRDRDTMQQIRIEADRAVDIIRDLMS 563



 Score = 43.7 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 22/68 (32%), Gaps = 9/68 (13%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL---PDEDRPN-- 67
          GF D      R++ RI D  R  +    GF  IE P +   +            D     
Sbjct: 29 GFYDYGPLGARLKRRIEDIWRRFFVIGEGFAEIECPTIGIEEVFRASGHLSGFSDPLTEC 88

Query: 68 ---KGVFS 72
             K ++ 
Sbjct: 89 KECKEIYR 96


>gi|332295956|ref|YP_004437879.1| threonyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179059|gb|AEE14748.1| threonyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 606

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 42/129 (32%), Gaps = 1/129 (0%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D   ++ +   +  T        L   +++             ++I  +  DS+ L    
Sbjct: 465 DKDGTKKRPVMIHRTVVGSMERFLGALIENYAGVFPAWLSPIQIIIIPVKEDSELLEYSS 524

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + L     R ++    ++    +++ A+    P  ++ G  E    ++ ++      
Sbjct: 525 EVEKKLSKEDYRVKVD-KRNETLKYRIRDAELNRIPYILVIGKKELDEKLISLRTRGMKD 583

Query: 455 ELSREIKNN 463
           E    I+  
Sbjct: 584 EGQMSIEEF 592



 Score = 39.8 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  IR  I D +R  +   G++ + TP +       K     D   + ++  + +D
Sbjct: 233 WHPNGGVIRTIIEDYLRKEHVKRGYEIVYTPHMMNLKI-WKISGHFDFYKENMYIFE-ND 290

Query: 78  GQWISLRYDLTAP 90
           GQ  +++      
Sbjct: 291 GQEYAVKPMNCPG 303


>gi|296446450|ref|ZP_06888394.1| threonyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296256085|gb|EFH03168.1| threonyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 643

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 42/340 (12%), Positives = 81/340 (23%), Gaps = 32/340 (9%)

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            +               +        L+ +        I  N  K    +  KI   G  
Sbjct: 304 WETSGHWQTYRENMFLTKTEDERIFALKPMNC-PGHVQIFKNGLKSYRDLPVKIAEFGIV 362

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT---SEQIDIMVSFLS 245
              E    L  + ++  F      +   E +            LT       D +V  LS
Sbjct: 363 HRYEPSGALHGMMRVRAFTQDDAHIFCNEDQIMEEALKINDLILTIYRDFGFDDVVVKLS 422

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              EK +       K   A  K  +EL         +                       
Sbjct: 423 TRPEKHVGSDEAWAKAEAALYKVLDELKARGLKTGVNPGEGAFYGPKLEYTLRDAIGREW 482

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +     P  FG+   G   +        + +    F        + ++  
Sbjct: 483 QCGTTQVDFNL-----PGRFGAFYIGSDSEKKTPVMIHRAM----FGSLERFTGILIEHY 533

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NF 417
                       +++ T+  D+D            R  G+  ++ L + K        + 
Sbjct: 534 AGHLPLWLSPLQIVVCTITQDAD--DYAYEVAAEARNVGLAVDLDLRNEKITYKVREHSL 591

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
                       P+ ++ G  E +   + I+ L    + S
Sbjct: 592 AK---------VPVLLVVGKKEAAEHTVSIRRLGSQAQSS 622



 Score = 40.6 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   ++  +R   +  G+  + TP +    +L +         + +F  
Sbjct: 262 GTIFWHEKGWALFQSLVSYMRRRQKAAGYKEVNTPQV-LDRALWETSGHWQTYRENMFLT 320

Query: 74  QDDDGQWISLRYDLTAPLA 92
           + +D +  +L+        
Sbjct: 321 KTEDERIFALKPMNCPGHV 339


>gi|323143349|ref|ZP_08078037.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416867|gb|EFY07513.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 644

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 46/403 (11%), Positives = 107/403 (26%), Gaps = 29/403 (7%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV-----DNVGSSAETADAEMCMMMA 152
           +F         +                    +          +        +      A
Sbjct: 255 HFQQEAPGMVFWHNDGWTIYRVIENFMREMLHKYHYIEVKTPQIMDRVLWERSGHWDKYA 314

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           + +     +  DY I   N      I         D                   L G+ 
Sbjct: 315 ENMFTTSSENRDYAIKPMNCPGAIQIFNSRTRSYRDLPIRMAEFGNCHRNEPSGSLHGL- 373

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           L +     D++  F     + +E  D +             ++   +        G +E+
Sbjct: 374 LRVRAFEQDDAHIFCTEDQIMTEVSDCIRMVYDTYSNFGFTKVDVKLSTRPEKRIGSDEI 433

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E         N ++       G  Y     +          +    V         
Sbjct: 434 WDKAEADLVEALKLNNLEYELQPGEGAFYGPKIEFTLHDSLDRAWQCG-TVQLDFSLPAR 492

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                +     ++ P       +G     + + + E + +    + P+    M+     +
Sbjct: 493 LDAHYIGEDNQEHTPVMIHRAMLGSIERFLGVLTEEFAGSFPTWLAPIQAVVMNITDGQV 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +   Q L  AGIR +  L + K  G +++     + P  ++ G  E   GM+ ++  
Sbjct: 553 DYVKQVAQKLDEAGIRVKSDLRNDK-VGFKIREHTLMHVPYMLVCGDREAESGMVAVR-- 609

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKK-ILQEN 492
                 +R+ ++  +          + + +L+  +K  I+  N
Sbjct: 610 ------TRKGQDLGA----------MKLDDLIKMIKSDIISRN 636



 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/152 (7%), Positives = 43/152 (28%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   I + +R +   Y +  ++TP +     L +     D+  + +F+ 
Sbjct: 262 GMVFWHNDGWTIYRVIENFMREMLHKYHYIEVKTPQIMDR-VLWERSGHWDKYAENMFT- 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              + +  +++        +       +                 +              
Sbjct: 320 TSSENRDYAIKPMNCPGAIQIFNSRTRSYRDLPIRMAEFGNCHRNEPSGSLHGLLRVRAF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
           +   +     + ++   ++D +  V    +++
Sbjct: 380 EQDDAHIFCTEDQIMTEVSDCIRMVYDTYSNF 411


>gi|229820980|ref|YP_002882506.1| prolyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566893|gb|ACQ80744.1| prolyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 586

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+  R+   +R   +  G   +  P L   +             +G+F L
Sbjct: 36  GIYTWLPLGLRVLARVEAIVREEMDAAGAQEVHFPALLPREPYEAS-GRWTTYGQGIFRL 94

Query: 74  QDDDGQWISLRY 85
           +D       L  
Sbjct: 95  KDRREGDYLLAP 106


>gi|56417255|ref|YP_154329.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|73919765|sp|Q5P9F6|SYT_ANAMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|56388487|gb|AAV87074.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 636

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/255 (9%), Positives = 74/255 (29%), Gaps = 14/255 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I   I + IR   + +G+  ++TP++     L +     ++  + +F ++D D
Sbjct: 267 WHDKGWVIYRIIEEYIRCKLKKHGYHEVKTPIM-LDRKLWEKSGHWEKFKENMFVVED-D 324

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++        +       +            +    +     +            
Sbjct: 325 KKELAIKPMNCPCHVQIFKSKIRSYKELPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDD 384

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +       ++   +    E +     D+              + + +   D+   R+   
Sbjct: 385 AHIFCTHEQVRDEVLRFYELLMEVYKDFG------------FDSVTVKLSDRPENRIGSD 432

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ ++  ++ +  L  +   +       G  L     D +         +    L +
Sbjct: 433 EIWDRSEQSLMEPMNALGVQYTINKGEGAFYGPKLEFTLKDSIGREWQCGTVQLDFVLPD 492

Query: 258 LVKGTIAGEKGFNEL 272
            +     GE G   +
Sbjct: 493 RLGAYYIGEDGKKHI 507


>gi|320580027|gb|EFW94250.1| Threonyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 714

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N + + +R  Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 334 WLPHGARIYNGLCELLRTQYRKRGYEEVITPNM-YNSKLWETSGHWANYKENMFTFEVEK 392

Query: 78  GQWISLRYDLTAP 90
                L+      
Sbjct: 393 D-TFGLKPMNCPG 404



 Score = 40.6 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 52/143 (36%), Gaps = 23/143 (16%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             + A+ +   +      + P  I  +          Q   ++L+T G  A++ L  +  
Sbjct: 588 ERMTAILTEHFAGKWPFWLSPRQILVVPVGVRYFDYAQEVQKLLQTEGFYADVDLSGNTL 647

Query: 417 FGN----QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  QL+  +        I G  E++   + I++        R+I+  +S  +    
Sbjct: 648 QKKVRTGQLQKYN-----FIFIVGEQEQNEKAVNIRN--------RDIQELQSKND---- 690

Query: 473 QITIPISELVSTVKKILQENKEE 495
              + +++++  +  +  E + +
Sbjct: 691 --MVKLNDVLPKLHALRDEKRND 711


>gi|319440593|ref|ZP_07989749.1| glycyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 460

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/100 (10%), Positives = 27/100 (27%), Gaps = 5/100 (5%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
               V +  +          +     LR        +   +S   G + +  D    P  
Sbjct: 363 SPVKVAVLPLSKKETLTPTAEKIADDLRALWN----VDYDTSGAIGRRYRRQDEIGTPFC 418

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           +           + +++     +    +   +S+  A +A
Sbjct: 419 VTVDFDTLEDNAVTVRERDTMNQERVSLDKLQSYLAAELA 458


>gi|240138057|ref|YP_002962529.1| putative histidyl-tRNA synthetase (hisS) [Methylobacterium
           extorquens AM1]
 gi|240008026|gb|ACS39252.1| putative histidyl-tRNA synthetase (hisS) [Methylobacterium
           extorquens AM1]
          Length = 352

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 117/361 (32%), Gaps = 67/361 (18%)

Query: 49  LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFP-CR 107
           +L+  +   +   ++ R  + +F  QD +G  + LR + T P+ R    +  T       
Sbjct: 1   MLQPVEPFLELSGEDIR--RRIFVTQDANGAELCLRPEFTIPVCRL---HQATRPGESAD 55

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
              +GPVFR     P  F Q     +    + A  A+     +         + R+D  +
Sbjct: 56  YSYLGPVFRLVAGEPDEFVQGGIESIGRTDTPAADAEVLGLALE----GLALLGRSDVTV 111

Query: 168 GINNRKILDGILEKIGLH--GDDKLNERLIVLRAIDKLDKFGLQG--------------- 210
            + +  +    L+ + +      +    +   R++D++                      
Sbjct: 112 RLGDMGLTHAFLDALHVPPVAKRRTLRAIAAGRSLDEVANSVQAEDRHAGLLAAIQGQDA 171

Query: 211 --VKLLLGE---------------------GRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
             V+  + +                          S     GA L +   +++  + +I 
Sbjct: 172 GAVRAFVEDVLSIAGISQVGGRSAGAIAERFLAKASAQAHGGAGLNATNREVIERYCAIS 231

Query: 248 LEKSMHELYELVKGTIAG------EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +              AG      E         +  +   G    R + +    R L+Y
Sbjct: 232 GDPDAAVAAVRALAREAGLTHDGLEAALALFEERTGFMAARGLPVERFRFNGGFARNLDY 291

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR-FKGQNVPATGFSIGISRLIV 360
           YTG ++E             P    ++ GGGRYDGL+ +      +PA G +  +SR   
Sbjct: 292 YTGFIFEVT----------GPQGGPTLVGGGRYDGLLQQLGSPVPLPAVGCAFWLSRCAQ 341

Query: 361 A 361
           A
Sbjct: 342 A 342


>gi|239627750|ref|ZP_04670781.1| glycyl-tRNA synthetase [Clostridiales bacterium 1_7_47_FAA]
 gi|239517896|gb|EEQ57762.1| glycyl-tRNA synthetase [Clostridiales bacterium 1_7_47FAA]
          Length = 462

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/238 (6%), Positives = 57/238 (23%), Gaps = 9/238 (3%)

Query: 240 MVSFLSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +  F   D + +      +     +       + +   +  ++     ++       +  
Sbjct: 226 LEFFCKPDTDLEWFAYWKQYCIDWLKALGIKEDEMRARDHEQEELSFYSKATTDLEFLFP 285

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           + +   +       S       +  +      ++ A   ++     
Sbjct: 286 FGWGELWGIADRTDYDLTQHQNVSGQDMSYFDDEAKEKYIPYVIEPSLGADRVTLAFLCA 345

Query: 359 IVALKSLESST-----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + +         +    + PV +  +          +     L +     E     
Sbjct: 346 AYDEEEIGEGDVRTVLHFHPALAPVKVGVLPLSKKLNEGAEKVYTEL-SKYFNCEFD--D 402

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
             N G + +  D    P  I           + ++D    +++   I   + +   + 
Sbjct: 403 RGNIGKRYRRQDEIGTPFCITYDFDSEEDHAVTVRDRDTMEQVRIPISELKDYFADKF 460


>gi|260757797|ref|ZP_05870145.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260668115|gb|EEX55055.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
          Length = 232

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 1/95 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I   G  ++     D       +   + L  AG+   +     +  G +    D 
Sbjct: 129 IWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 187

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  IK
Sbjct: 188 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIK 222


>gi|254730107|ref|ZP_05188685.1| prolyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
          Length = 232

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 1/95 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I   G  ++     D       +   + L  AG+   +     +  G +    D 
Sbjct: 129 IWPKTIAPFGAGIVNMKPGDEGCDGVSEKLYEALTNAGVDPLLDDKDER-PGAKFATMDL 187

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              P  +I G    + G +++KD   G+  S  IK
Sbjct: 188 IGLPTQVIVGPRGVAAGEVEVKDRKTGERQSLGIK 222


>gi|229541948|ref|ZP_04431008.1| glycyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326368|gb|EEN92043.1| glycyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 512

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/239 (8%), Positives = 64/239 (26%), Gaps = 10/239 (4%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  K      +  +  +       E + + +  ++   + +           
Sbjct: 276 LEFFCRPGEELKWFDYWKQYAREFLLNLGMKEENLRLRDHEKEELSHYSNATTDFEYNFP 335

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   + +    +      +       +  V      ++ A   ++     
Sbjct: 336 FGWGELWGIASRTDYDLKRHMEYSGEDFTYLDQETNERFVPYCIEPSLGADRVALAFLID 395

Query: 359 IVALKSLES-----STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
             A + LE        +    + P     +       ++ +     L        +    
Sbjct: 396 SYAEEELEDGTSRTVMHLHPALAPYKAAVLPLSKKLSAEARDIFSDLSK---TFMVDFDE 452

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + + G + +  D    P  I      R   M+ ++D    ++    I   +++ E ++ 
Sbjct: 453 TGSIGKRYRRQDEIGTPFCITYDFDSRDDHMVTVRDRDTMEQTRVPITELKAFLEEKIK 511


>gi|255560023|ref|XP_002521030.1| threonyl-tRNA synthetase, putative [Ricinus communis]
 gi|223539867|gb|EEF41447.1| threonyl-tRNA synthetase, putative [Ricinus communis]
          Length = 691

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 35/121 (28%), Gaps = 8/121 (6%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +    R +   +             + L+  +            ++  +     S     
Sbjct: 577 EDEAKRERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS--EKSQEYAV 634

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                +  AG   ++ L + +    +++ A        ++ G  E   G +     AKGK
Sbjct: 635 QVQDQIHKAGYYIDVDL-TDRKIQKKVREAQLAQYNYILVVGEEEAKTGQV-----AKGK 688

Query: 455 E 455
           +
Sbjct: 689 Q 689



 Score = 36.7 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++D IR  Y   G++ +++P + Y+  L +         + +F L+ + 
Sbjct: 344 FLPHGTRIYNKLMDFIRVQYRERGYEEVKSPNI-YNMKLWETSGHAANYKENMFLLEIEK 402

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 403 -QEFGLKPMNCPG 414


>gi|217031454|ref|ZP_03436959.1| hypothetical protein HPB128_21g12 [Helicobacter pylori B128]
 gi|216946654|gb|EEC25250.1| hypothetical protein HPB128_21g12 [Helicobacter pylori B128]
          Length = 517

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 88/295 (29%), Gaps = 14/295 (4%)

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +++    L          L+ VK L        N+ +  + +        ++  F+    
Sbjct: 226 IHKDKETLACFFVRGDDNLEEVKALNALNLLGANALELREASKEDLNHAGLIAGFIGPYG 285

Query: 249 EK---SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            K   S     E +K +     G NE    +  V   G+ +        +          
Sbjct: 286 LKKHVSYIIFDEDLKESDCLIVGANEKDFHAVGVDLKGFENLVYADIVQVKESDHCPNCQ 345

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                     +    K     +      +     + +   +   G  I  SRL+ A+   
Sbjct: 346 GALKYHKSLEVGHIFKLGQGYAKSLKASFLDKNGKEQFFEMGCYGIGI--SRLLSAILEQ 403

Query: 366 E------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +        T N      V++ +   D           + L   G+ A +    ++ FG 
Sbjct: 404 KSDDLGCVWTKNTAPFDVVIVVSNWKDEAQKKLAFEVYERLLQKGVDALLDDRDAR-FGA 462

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
           +++  +     LA+I G         + +K     K+  ++I+  E   E   ++
Sbjct: 463 KMRDFELIGERLALIVGKQTLENKEFECVKRANLEKQTIKDIELEEKILEILASE 517


>gi|330503839|ref|YP_004380708.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328918125|gb|AEB58956.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 640

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/262 (11%), Positives = 76/262 (29%), Gaps = 13/262 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    ++   +    A   G +EL   +E   
Sbjct: 381 DDAHIFCTEDQVKKEAADFIRLTLQVYSDFGFTDIAMKLSTRPAKRVGSDELWDRAEGAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ---KPVVFGSVGGGGRYDGL 337
               N + +        G  Y     +          +                      
Sbjct: 441 AEALNESGLAWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
            +R +   +           + + ++    S    +     V++   D  +D   + +  
Sbjct: 501 NNRKRPVMLHRAILGSFERFIGMLIEHYAGSFPAWLAPTQAVIMNITDKQADFAREAEK- 559

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L  +G RA++ L  ++  G +++       P  ++ G  E     + ++     +  
Sbjct: 560 --TLNQSGFRAKVDL-RNEKIGFKIREHTLLKVPYLLVIGDREVETRSVAVR---TRE-- 611

Query: 457 SREIKNNESWREARVAQITIPI 478
             ++ +    + A   Q  +  
Sbjct: 612 GVDLGSMPIEQFAAQLQQAVSR 633



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 9/143 (6%), Positives = 36/143 (25%), Gaps = 2/143 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +   +G+  + TP +     L +         + +F+ 
Sbjct: 261 GMVFWHPNGWTVYQVLEQYMRQVQREHGYVEVRTPQVVDR-ILWERSGHWSNYAENMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             ++ +  +++        +   +   +                 +              
Sbjct: 320 ASEN-RDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLE 156
               +     + ++    AD + 
Sbjct: 379 VQDDAHIFCTEDQVKKEAADFIR 401


>gi|94968092|ref|YP_590140.1| prolyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|122986393|sp|Q1IST4|SYP_ACIBL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94550142|gb|ABF40066.1| prolyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 587

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 3/105 (2%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                       V++T  +   + L+K  +     L  AG    +     +  G + K A
Sbjct: 479 GFWLPAQIAPFEVVVTPTNVSDEKLAKGAEEIAAKLEAAGFDVILDDRDER-PGVKFKDA 537

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           D    P+ I  G      G +++   +  + L   I        A
Sbjct: 538 DLVGIPVRINVGKK-FVEGKVEVIHRSTRESLDATIPEIVEKIAA 581



 Score = 44.8 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 36/118 (30%), Gaps = 8/118 (6%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G         R  N+I+  +R   +  G      P L   +   +           
Sbjct: 35  QLAAGIYSYLFLGNRSMNKIIGIVREEMDKIG-QEYYLPALNPREI-WEASGRWAVMGDN 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR 124
           +F L+D  G  + L     ++   +AR   +   +     + +        ++  P  
Sbjct: 93  MFRLKDRKGAELCLGMTHEEIMTEIAR---KELRSYKQLPQIWYQIQTKFRDEPRPRS 147


>gi|302818920|ref|XP_002991132.1| hypothetical protein SELMODRAFT_132981 [Selaginella moellendorffii]
 gi|300141063|gb|EFJ07778.1| hypothetical protein SELMODRAFT_132981 [Selaginella moellendorffii]
          Length = 528

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 41/133 (30%), Gaps = 16/133 (12%)

Query: 363 KSLESSTNNIKEMGPVLITTM----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                          V+I  +    D     L        ++R AGIR ++     +  G
Sbjct: 320 DDKGLMLPPKLAPIQVVIVPIWKKGDEQESVLQAAHKVESLVRAAGIRVKLDTFDQRTPG 379

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +  + + +  P+ I  G  + +   + +          R++            + ++  
Sbjct: 380 WKFNHWELKGVPIRIEIGPKDVANNSVVV--------ARRDVPGKAGKEFGIFMERSV-- 429

Query: 479 SELVSTVKKILQE 491
             L+  ++  L +
Sbjct: 430 --LIDHLRAKLDD 440


>gi|291518260|emb|CBK73481.1| prolyl-tRNA synthetase, family I [Butyrivibrio fibrisolvens 16/4]
          Length = 479

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 58/158 (36%), Gaps = 16/158 (10%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD---HDSDS 389
           +Y    ++ +  +  + G +  +   I+ +   +S       + P  +  +         
Sbjct: 247 QYTDKNNQLQYVHQTSWGMTTRLIGAIIMVHGDDSGLVLPPRIAPTQVVVIPIQQKKEGV 306

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L K     + L    +RA++   S K+ G +   A+ R  P+ +  G  +   G   +  
Sbjct: 307 LEKAGEVCEKL-GKTMRAKLD-DSDKSPGWKFSEAEMRGIPVRVELGPKDIEAGKCVLVR 364

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
               +++   +            Q+   ++EL+ T++K
Sbjct: 365 RDTREKIECPLD-----------QVETKVAELLETIQK 391


>gi|255262353|ref|ZP_05341695.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104688|gb|EET47362.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 649

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 79/249 (31%), Gaps = 12/249 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F +   +  E    +    +I  +    +             G +E+   +E   
Sbjct: 393 DDGHIFCREDQVQEETAVYIEFLSTIYKDLGFEKFRVKYSDRPDTRAGSDEVWDKAEQAL 452

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVS- 339
            +   +  I+       G  Y      E +L   +  + Q            R D     
Sbjct: 453 LTATRNAGIEPEMNPGEGAFYG--PKLEFVLTDAIGRDWQCGTHQVDFVLPERLDATYIG 510

Query: 340 ----RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
               + +   +           + + ++              V++TT+  D+D  +    
Sbjct: 511 TDGGKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVTTIVSDADDFAA--E 568

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             + LR+ G+RAE     ++    +++       P+ +  G  E     + ++ L  G++
Sbjct: 569 IVETLRSKGVRAE-ADTRNEKINYKVREHSLAKVPVILAIGQREVDERTVSVRRL--GEK 625

Query: 456 LSREIKNNE 464
            S+ I  +E
Sbjct: 626 QSKVIAFDE 634


>gi|171778813|ref|ZP_02919875.1| hypothetical protein STRINF_00734 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282459|gb|EDT47883.1| hypothetical protein STRINF_00734 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 618

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKKIMREEFEKIGAVEMLAPALLNAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIG 112
           ++ D     L    + T   L R   +++  +       +  
Sbjct: 97  KNRDKSDFILGPTHEETFTSLVRDAVKSYKQLPLNLYQIQSK 138



 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      +IT    D ++ +        L   G    +   + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHVITVNVKDEEAQALTAKVEAELVAKGYEVLVDNRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G++++K  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AADGIVEVKIKATGDTIEVNAENLIETLEILTKE 617


>gi|118573261|sp|Q1L6A3|PYLS_METTE RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|67773309|gb|AAY81923.1| pyrrolysyl-tRNA synthetase [Methanosarcina thermophila]
          Length = 478

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 7/133 (5%)

Query: 28  RILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED-RPNKGVFSLQDDDGQWISLRYD 86
           ++   I   + + GF  I++P+L   + + +   D D   +K +F +         LR  
Sbjct: 269 KLEREITKFFVDRGFLEIKSPILIPMEYIERMGIDNDKELSKQIFRV----DNNFCLRPM 324

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
           L   L  Y+ +    +  P + + IGP +R E  G     +F    ++     +      
Sbjct: 325 LAPNLYNYLRKLNRALPDPIKIFEIGPCYRKESDGKEHLEEFTM--LNFCQMGSGCTREN 382

Query: 147 MCMMMADTLEAVG 159
           +  ++ D L+ +G
Sbjct: 383 LEAIIKDFLDYLG 395


>gi|62184882|ref|YP_219667.1| prolyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312944|sp|Q5L6M5|SYP_CHLAB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|62147949|emb|CAH63696.1| prolyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 577

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL-PDEDRP 66
             +  +G         R+  +++D IR      G   +  P+L  ++   K    +  R 
Sbjct: 32  IFKTAKGIYTYTPLFWRVALKMMDIIREELNAIGGQELVLPILHPAELWQKTGRWEAFRS 91

Query: 67  NKGVFSLQDDDGQWISLRY 85
              +++++D + +   L  
Sbjct: 92  EGLLYTVKDREDKEFCLAP 110



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 3/135 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVAL-KSLESSTNNIKEMGPVLITTMDHDSDSLS 391
           + +    +         G    ++  I  L                + I     D+    
Sbjct: 430 QDEQGKPQSCWMGTYGIGIGRTLAACIEQLADDRGIVWPKAIAPFDISILYNGGDTACEE 489

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +   + L+  G  A +    ++  G +LK +D    P  +I G    + GML+I+   
Sbjct: 490 AAEKIYKELQGYGY-APLLDDRNERLGFKLKDSDLIGIPYKLILGKTFLNSGMLEIES-R 547

Query: 452 KGKELSREIKNNESW 466
             ++ S E K+   W
Sbjct: 548 SIEKFSVEPKDFVHW 562


>gi|313837260|gb|EFS74974.1| glycyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314972031|gb|EFT16129.1| glycyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 472

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 29/97 (29%), Gaps = 7/97 (7%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           +  +  +SD   K +     LR         +    ++  G + +  D    P  +    
Sbjct: 381 VLPLSRNSDLSPKARDLAAQLRQWWN-----VDFDDAQAIGKRYRRQDEIGTPFCVTVDF 435

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
                  + ++D     +    +   E +   R+ + 
Sbjct: 436 DTLDDNAVTVRDRDTMSQERIALDKVEDYLAERLPRF 472


>gi|254511025|ref|ZP_05123092.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534736|gb|EEE37724.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 652

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 68/244 (27%), Gaps = 16/244 (6%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F     + SE    +     +  +   H+    +        G +E   I E   
Sbjct: 396 DDGHIFCSEDQIESETAKFIAFLSKVYADLGFHDWTIKLSTRPEKRIGSDESWDIVEKAL 455

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                +           G  Y     +   +AI         Q                 
Sbjct: 456 GDACKAAGYDYEVLEGEGAFYGPKLEFTLTDAIGRDWQCGTLQVDPNLPERLDANFIGAD 515

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            ++ +   +           + + ++              V++ ++  ++D         
Sbjct: 516 GAKHRPFMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSEAD--DYVMEVV 573

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADR----RNCPLAIIQGTGERSRGMLQIKDLAKG 453
             L+ AGIRAE  + + K     + Y  R       P+ +  G  E     + I+ L  G
Sbjct: 574 DTLKAAGIRAEADIRNEK-----INYKVREHSVSKVPVILAVGHREVEERTVTIRRL--G 626

Query: 454 KELS 457
           ++ +
Sbjct: 627 EKQT 630


>gi|195392357|ref|XP_002054824.1| GJ22578 [Drosophila virilis]
 gi|194152910|gb|EDW68344.1| GJ22578 [Drosophila virilis]
          Length = 603

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/295 (11%), Positives = 84/295 (28%), Gaps = 26/295 (8%)

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQ-----GVKLLLGEGRTDNSGDFTKGANLTSEQ 236
              +     + R + +R     +    +                +    F   A    E 
Sbjct: 217 YPAYAKWIQSYRDLPIRLNQWNNVVRWEFKHPQPFLRTREFLWQEGHTAFASKAEADKEV 276

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           ++I+  +  +  +     + +  K       G +    +   +  SG       I     
Sbjct: 277 LEILDLYAQVYTDLLAIPVVKGRKTEKEKFAGGDYTTTVEAFISASGRA-----IQGATS 331

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
             L      ++E +   P   +K             +Y    S             +   
Sbjct: 332 HHLGQNFSKMFEIVYEDPETQQK-------------QYVYQNSWGITTRTIGVMIMVHAD 378

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
              + L    +    I     + + T D + +  L+      + L  AG+R E     + 
Sbjct: 379 NQGLVLPPHVACVQAIVVPCGITVNTKDEERAQLLAACDKLEKRLNGAGVRCEGDYRDNY 438

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREA 469
           + G +  + + +  P+ I  G  +      + ++    G++L+  + + E    A
Sbjct: 439 SPGWKFNHWELKGVPIRIELGPKDMQAKQIVAVR-RDTGEKLTIALADVEKKIPA 492


>gi|146420108|ref|XP_001486012.1| hypothetical protein PGUG_01683 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146389427|gb|EDK37585.1| hypothetical protein PGUG_01683 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 719

 Score = 46.4 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI NR++D +R+ Y    F  + TP + Y+  L +         + +F+ 
Sbjct: 333 GSAFWLPHGTRIYNRLVDLMRSEYIQRDFQEVITPNM-YNSKLWETSGHWGNYKENMFTF 391

Query: 74  QDDDGQWISLRYDLTAP 90
            D +     L+      
Sbjct: 392 -DVEKDSFGLKPMNCPG 407



 Score = 41.0 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 43/140 (30%), Gaps = 16/140 (11%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML-RTAGIRAEMFLGSSK 415
             + A+ +          + P  I  +          Q   Q L +     A++ L  + 
Sbjct: 591 ERMAAILTEHFKGRWPFWLSPRQILVVPVGVKYNDYAQSIQQKLSKDHAFYADVDLSGN- 649

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
               +++           I G  E++   + I++                 +  +    T
Sbjct: 650 TLQKKVRSGQLLQYNFIFIVGEQEQAEQSVNIRNR--------------DIQSEQGKNET 695

Query: 476 IPISELVSTVKKILQENKEE 495
           +   ++V  +K +  E +++
Sbjct: 696 VKFGDVVKQLKSLRDELRKD 715


>gi|315230204|ref|YP_004070640.1| ATP phosphoribosyltransferase regulatory subunit [Thermococcus
           barophilus MP]
 gi|315183232|gb|ADT83417.1| ATP phosphoribosyltransferase regulatory subunit [Thermococcus
           barophilus MP]
          Length = 296

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 117/391 (29%), Gaps = 101/391 (25%)

Query: 19  PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
              E      I   +R  +E +G+  I  P +E      +F     +  K V+     + 
Sbjct: 5   LFSESERLADITKYLRRTFELWGYREIFLPTIE------EFSGQLRKGTKFVY-----NN 53

Query: 79  QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGS 138
           ++  ++ DLT+ +               + Y I  V      G        Q  V+ +G 
Sbjct: 54  EFYVIKPDLTSQIL-----ANLKEPRRLKIYYISEVLNGGIKGD------WQAGVEFIGG 102

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
                  E+ + +  +LEA+G    D++I + + K+ +  +E                  
Sbjct: 103 DDIKMQVEVLLTVITSLEALG--IEDFYIDVGSLKVWERAIE------------------ 142

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYEL 258
                   G++  K  +    T  + +  +   +  E+ + +    +   +       E 
Sbjct: 143 --------GIEEFKAEIFRALTRRNFEIIERLPINEEKKEELWQLFNFRGKS-----CEY 189

Query: 259 VKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNE 318
            K     E   +E                R+ I    +R L YY+  ++E          
Sbjct: 190 EKLNKIIEAVDDE----------------RVFIDFGTIRPLPYYSDIIFEVY-------- 225

Query: 319 KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPV 378
              P +   +GGGG Y    +            + G +  + AL  L             
Sbjct: 226 --SPRIGKPLGGGGEYTFKGA-----------SAFGFAFDLNALSKLFDGKIEKSRKRIR 272

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                      + +     + L   GI  E+
Sbjct: 273 ---------GKMKEAYKLARELVKLGIPVEV 294


>gi|255722445|ref|XP_002546157.1| prolyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240136646|gb|EER36199.1| prolyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 559

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 60/472 (12%), Positives = 135/472 (28%), Gaps = 67/472 (14%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  +     + I+N+I   IR+  +  GF+ +   L+ Y   L +     D+ +  +F 
Sbjct: 46  SGLVNWSKSGLLIQNKISSIIRSRMDEIGFEELSLSLISYKK-LWQETGRWDK-STEIFK 103

Query: 73  LQDDDGQWISLRY----DLTAPLARYVAENFDTIVFPCRTYRI-GPVFRNEKHGPGRFRQ 127
           L+   G    L      ++T     Y+ +N ++            P FRNEK   G   +
Sbjct: 104 LE---GDEYLLVPTAEEEIT----DYINKNLESYKQLPILMYQINPKFRNEKRPRGGLLR 156

Query: 128 FIQCDV---DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGL 184
             +  +    +       A      ++    +  G  +  Y     +   + G L     
Sbjct: 157 GKEFLMKDAYSFDLDESNAMNTYEKVVGAYHKIFGDLKIPYVKAQADSGDIGGSLSHEWH 216

Query: 185 HGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244
           + ++   + +                 K L      D S + +    +T+++  ++ ++ 
Sbjct: 217 YINETGEDTVFKCNEC----NHTSNVEKTLSYPKDYDESAEISVKYFITTDKSTLICAYY 272

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGY-----------NSNRIKISS 293
             +       +   +      E   +E++   E    S              S       
Sbjct: 273 PSNRIIEPKFIQNEIPDLDLNETNQDEILKEFETEDLSKRVIRIMDSRLTSRSRFPDFPI 332

Query: 294 TIVRGLEYYTGCVYEAILGFPV----------MNEKQKPVVFGSVGGGGRYDGLVSRF-- 341
             +      T      +L              ++ +    V  +   G +Y   ++    
Sbjct: 333 GFINRSLITTLTDIPIVLAEEGEICAQCEDGEISAQNAIEVGHTFYLGDKYSKPLNCNID 392

Query: 342 -------KGQNVPATGFSIGISRLIVALKSL------ESSTNNIKEMGPVLITTMDHDSD 388
                    +     G        I+A  +         +         V    +  D +
Sbjct: 393 VPTAEGGMNKQTIMMGCYGIGISRIIAAIAQINRDSKGLNWPRSIAPWEVTAVEIGQDEE 452

Query: 389 SLSKYQMYTQMLRTAGIRAEMFL---GSSKNFGNQLKYADRRNCPLAIIQGT 437
              +           G    +       +++ G +LK ++    PL+II G 
Sbjct: 453 RTKEVFKLLN----HGK---IDYRLDDRNESMGKKLKQSNLMGIPLSIILGK 497


>gi|212704422|ref|ZP_03312550.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098]
 gi|212672143|gb|EEB32626.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098]
          Length = 648

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 35/122 (28%), Gaps = 3/122 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G         +        + R I  L    +                  D+ +   
Sbjct: 498 TYVGQDGERHRPVMVHRAIMGSLERFIGVLIEQYAGAMPTWLAPEQARILTVTDAHN-EA 556

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                + L+  GIR       ++  G +++ A     P  ++ G  E   G + ++ L  
Sbjct: 557 ALKACEELKALGIRV-TADTRNEKLGFKVREAQLAKVPYILVVGEKEAQAGGVNVR-LRN 614

Query: 453 GK 454
           G 
Sbjct: 615 GD 616



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 32/105 (30%), Gaps = 9/105 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +R  + D  R  +    +D ++ P L   ++  +     D   + ++  
Sbjct: 265 GMVFWLPKGMMMRTILEDFWRREHIKRNYDLVQGPQLLRVETWQRS-GHYDHYRQNMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              +     ++             +        R+YR  P    E
Sbjct: 323 TQIEDDQYGIKPMN-------CISHMLIYRNDLRSYRDLPQRYFE 360


>gi|325292061|ref|YP_004277925.1| ATP phosphoribosyltransferase regulatory subunit [Agrobacterium
          sp. H13-3]
 gi|325059914|gb|ADY63605.1| ATP phosphoribosyltransferase regulatory subunit [Agrobacterium
          sp. H13-3]
          Length = 375

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 43 DPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
            + TP+++ ++       ++ R  + +F  + + G+ + LR + T P+ 
Sbjct: 23 SRVNTPVIQPAEPFLDMAGEDLR--RRIFMTESETGESLCLRPEFTIPVC 70


>gi|316965047|gb|EFV49888.1| threonyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 714

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    +   I N +++ +R  Y   GF  + TP + Y+  L +         K +F +
Sbjct: 314 GSAFFFPRGAYIYNTLVEFLRKQYRKRGFREVITPNI-YNSRLWETSGHWQHYAKNMFKI 372

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
           + +  +   L+           A 
Sbjct: 373 EIEK-ELFGLKPMNCPGHCLMFAT 395



 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 73/234 (31%), Gaps = 6/234 (2%)

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
            + D++  F +   + SE I+  + FL    E     +   +      +    ++    E
Sbjct: 431 FQQDDAHIFCRQDQIASE-IEGCLDFLRFVYETLGFSMKLYLSTRP--DDFMGDVKTWDE 487

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
              +      + K+  T+  G   + G   + I+   +  + Q   +        R+D  
Sbjct: 488 AEAQLQCALEKFKLPWTLNAGDGAFYGPKIDIIVLDAMQRQHQCATIQLDFQLPVRFDLH 547

Query: 338 VSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                             +G    ++A+ +   +      + P     +    +      
Sbjct: 548 YVDENHVKQRPVIIHRAVLGSIERMIAVLTENFAGKWPFWLSPRQAMVIPVHPEFDDYAL 607

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              Q +  AG   ++ + +S     +++ A        ++ G  E+    + I+
Sbjct: 608 QVQQKIFDAGFECDVDVDASDTMKKKIRNAQLGKWNFILVVGAKEKENSSVNIR 661


>gi|172087694|ref|YP_204597.2| threonyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197335357|ref|YP_002156016.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|171902287|gb|AAW85709.2| threonyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197316847|gb|ACH66294.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 642

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 49/389 (12%), Positives = 104/389 (26%), Gaps = 20/389 (5%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
            N  TI      +    + + +           +   +  G   + A+A       +   
Sbjct: 268 HNGWTIFRELEVFVREKLTQYDYQEVKGPLMMDRVLWERSGHWDKYAEAMFTTSSENREY 327

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
           A+       H+ I N+ +      K       ++ E     R        G+  V+    
Sbjct: 328 AIKPMNCPGHVQIFNQGL------KSYRDLPLRMAEFGSCHRNEPSGALHGIMRVRG--- 378

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
               D++  F   A +  E    +              +   +        G +E+   +
Sbjct: 379 -FTQDDAHVFCTEAQVQQEVKSCIEMVYDTYQTFGFDNIVVKLSTRPEQRVGSDEMWDRA 437

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----G 331
           E   K    S  I        G  Y     +        ++   +              G
Sbjct: 438 ESDLKLALESMEIPYEIQEGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALPERLG 494

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
             Y G  +      +        + R I  L    +            I  M        
Sbjct: 495 ATYVGEDNERHTPVMIHRAILGSLERFIGILIEDYAGFFPTWLAPEQAI-VMGITDKQAD 553

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             Q   + L+  G R +  L  ++  G +++    +  P  ++ G  E   G + ++   
Sbjct: 554 YVQEIAKKLQKNGFRVKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRK 612

Query: 452 KGKELSREIKNNESWREARVAQITIPISE 480
                  +I +  ++ +  V+  T+   E
Sbjct: 613 GKDLGKFKIDDFVAFLQQEVSARTLNTVE 641



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/197 (9%), Positives = 53/197 (26%), Gaps = 11/197 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQQEAP-GMVFWHHNGWTIFRELEVFVREKLTQYDYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +  +++        +   +   +                 +       
Sbjct: 314 AEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     +A++   +   +        +           D I+ K+    
Sbjct: 373 IMRVRGFTQDDAHVFCTEAQVQQEVKSCI--------EMVYDTYQTFGFDNIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKL 203
           + ++    +  RA   L
Sbjct: 425 EQRVGSDEMWDRAESDL 441


>gi|15888021|ref|NP_353702.1| ATP phosphoribosyltransferase regulatory subunit [Agrobacterium
          tumefaciens str. C58]
 gi|46395915|sp|Q8UHK2|HISZ_AGRT5 RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|15155637|gb|AAK86487.1| histidyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 375

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 43 DPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLA 92
            + TP+++ ++       ++ R  + +F  + + G+ + LR + T P+ 
Sbjct: 23 SRVNTPVIQPAEPFLDMAGEDLR--RRIFMTESETGESLCLRPEFTIPVC 70


>gi|312129532|ref|YP_003996872.1| glycyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311906078|gb|ADQ16519.1| glycyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 485

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 20/97 (20%), Gaps = 3/97 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K Q     LR                G +    D    P  I      
Sbjct: 388 VLPLVKKDGLAEKAQEIAASLRLHFRTV---YDEGGAIGKRYTRQDLIGTPFCIAVDYET 444

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                + I+     ++    I   +      V    I
Sbjct: 445 MENNTVTIRHRDSMEQERVPIDQLKEKIGYAVDFQRI 481


>gi|306785673|ref|ZP_07423995.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu003]
 gi|308329673|gb|EFP18524.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu003]
          Length = 582

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R   P G        +R+   I   IR+     G   I  P L      ++  ++    
Sbjct: 34  IRPVAP-GLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPALLPRAPYETTNRWTQYG 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D      F L+D  G    L  
Sbjct: 93  DSV----FRLKDRRGNDYLLGP 110



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L     +      V +   + D+ + +        L   G+   +      + G + K
Sbjct: 473 DELGLRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLD-DRQASAGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    P  ++ G    + G+++++D   G+
Sbjct: 532 DAELLGMPWIVVVG-RGWADGVVELRDRFSGQ 562


>gi|260187861|ref|ZP_05765335.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|289448507|ref|ZP_06438251.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CPHL_A]
 gi|289421465|gb|EFD18666.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CPHL_A]
          Length = 582

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R   P G        +R+   I   IR+     G   I  P L      ++  ++    
Sbjct: 34  IRPVAP-GLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPALLPRAPYETTNRWTQYG 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D      F L+D  G    L  
Sbjct: 93  DSV----FRLKDRRGNDYLLGP 110



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L     +      V +   + D+ + +        L   G+   +      + G + K
Sbjct: 473 DELGLRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLD-DRQASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    P  ++ G    + G+++++D   G+
Sbjct: 532 DAELLGMPWIVVVG-RGWADGVVELRDRFSGQ 562


>gi|207742945|ref|YP_002259337.1| threonyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
 gi|206594340|emb|CAQ61267.1| probable threonyl-trna synthetase protein [Ralstonia solanacearum
           IPO1609]
          Length = 379

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/96 (9%), Positives = 28/96 (29%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   +R      G+  + TP +    +L +         + +F +
Sbjct: 261 GMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDR-TLWEHSGHWQNYKENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
            + + +  +++        +    +           
Sbjct: 319 TESEKREYAIKPMNCPGHVQIF-NHGLRSYRDLPLR 353


>gi|13882685|gb|AAK47237.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
          Length = 578

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R   P G        +R+   I   IR+     G   I  P L      ++  ++    
Sbjct: 30  IRPVAP-GLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPALLPRAPYETTNRWTQYG 88

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D      F L+D  G    L  
Sbjct: 89  DSV----FRLKDRRGNDYLLGP 106



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L     +      V +   + D+ + +        L   G+   +      + G + K
Sbjct: 469 DELGLRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLD-DRQASPGVKFK 527

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    P  ++ G    + G+++++D   G+
Sbjct: 528 DAELLGMPWIVVVG-RGWADGVVELRDRFSGQ 558


>gi|31794022|ref|NP_856515.1| prolyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638725|ref|YP_978949.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224991217|ref|YP_002645906.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|81834897|sp|Q7TXQ5|SYP_MYCBO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152112932|sp|A1KMI8|SYP_MYCBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|31619616|emb|CAD95055.1| PUTATIVE PROLYL-TRNA SYNTHETASE PROS (PROLINE--TRNA LIGASE) (PRORS)
           (GLOBAL RNA SYNTHESIS FACTOR) (PROLINE TRANSLASE)
           [Mycobacterium bovis AF2122/97]
 gi|121494373|emb|CAL72854.1| Putative prolyl-tRNA synthetase proS [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224774332|dbj|BAH27138.1| prolyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 582

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R   P G        +R+   I   IR+     G   I  P L      ++  ++    
Sbjct: 34  IRPVAP-GLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPALLPRAPYETTNRWTQYG 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D      F L+D  G    L  
Sbjct: 93  DSV----FRLKDRRGNDYLLGP 110



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L     +      V +   + D+ + +        L   G+   +      + G + K
Sbjct: 473 DELGLRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLD-DRQASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    P  ++ G    + G+++++D   G+
Sbjct: 532 DAELLGMPWIVVVG-RGWADGVVELRDRFSGQ 562


>gi|15609982|ref|NP_217361.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|148662686|ref|YP_001284209.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148824035|ref|YP_001288789.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|161350062|ref|NP_337423.2| prolyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|167967198|ref|ZP_02549475.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404817|ref|ZP_03416998.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412677|ref|ZP_03421395.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215428284|ref|ZP_03426203.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215431786|ref|ZP_03429705.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|218754593|ref|ZP_03533389.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558862|ref|ZP_03537938.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|253798069|ref|YP_003031070.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 1435]
 gi|254232940|ref|ZP_04926267.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis C]
 gi|254365491|ref|ZP_04981536.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551909|ref|ZP_05142356.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260201976|ref|ZP_05769467.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260206156|ref|ZP_05773647.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289444396|ref|ZP_06434140.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289553367|ref|ZP_06442577.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 605]
 gi|289571033|ref|ZP_06451260.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T17]
 gi|289575546|ref|ZP_06455773.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis K85]
 gi|289746643|ref|ZP_06506021.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289751506|ref|ZP_06510884.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T92]
 gi|289754953|ref|ZP_06514331.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289763021|ref|ZP_06522399.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis GM 1503]
 gi|297635458|ref|ZP_06953238.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297732457|ref|ZP_06961575.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298526313|ref|ZP_07013722.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777129|ref|ZP_07415466.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu001]
 gi|306781035|ref|ZP_07419372.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu002]
 gi|306789713|ref|ZP_07428035.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu004]
 gi|306794347|ref|ZP_07432649.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu005]
 gi|306798770|ref|ZP_07437072.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu006]
 gi|306804616|ref|ZP_07441284.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu008]
 gi|306807350|ref|ZP_07444018.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu007]
 gi|306968909|ref|ZP_07481570.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu009]
 gi|306973245|ref|ZP_07485906.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu010]
 gi|307080954|ref|ZP_07490124.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu011]
 gi|307085549|ref|ZP_07494662.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu012]
 gi|313659789|ref|ZP_07816669.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|2501040|sp|O05814|SYP_MYCTU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2078014|emb|CAB08445.1| PROBABLE PROLYL-TRNA SYNTHETASE PROS (PROLINE--TRNA LIGASE) (PRORS)
           (GLOBAL RNA SYNTHESIS FACTOR) (PROLINE TRANSLASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|124601999|gb|EAY61009.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis C]
 gi|134151004|gb|EBA43049.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506838|gb|ABQ74647.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722562|gb|ABR07187.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis F11]
 gi|253319572|gb|ACT24175.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 1435]
 gi|289417315|gb|EFD14555.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289437999|gb|EFD20492.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 605]
 gi|289539977|gb|EFD44555.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis K85]
 gi|289544787|gb|EFD48435.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T17]
 gi|289687171|gb|EFD54659.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289692093|gb|EFD59522.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T92]
 gi|289695540|gb|EFD62969.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289710527|gb|EFD74543.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis GM 1503]
 gi|298496107|gb|EFI31401.1| prolyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214498|gb|EFO73897.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu001]
 gi|308326143|gb|EFP14994.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu002]
 gi|308333812|gb|EFP22663.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu004]
 gi|308337323|gb|EFP26174.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu005]
 gi|308340981|gb|EFP29832.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu006]
 gi|308346273|gb|EFP35124.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu007]
 gi|308348796|gb|EFP37647.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu008]
 gi|308353522|gb|EFP42373.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu009]
 gi|308357363|gb|EFP46214.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu010]
 gi|308361316|gb|EFP50167.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu011]
 gi|308364916|gb|EFP53767.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis SUMu012]
 gi|323718544|gb|EGB27714.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis CDC1551A]
 gi|326904458|gb|EGE51391.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis W-148]
 gi|328457842|gb|AEB03265.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis KZN 4207]
          Length = 582

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 8/82 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDE 63
           +R   P G        +R+   I   IR+     G   I  P L      ++  ++    
Sbjct: 34  IRPVAP-GLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPALLPRAPYETTNRWTQYG 92

Query: 64  DRPNKGVFSLQDDDGQWISLRY 85
           D      F L+D  G    L  
Sbjct: 93  DSV----FRLKDRRGNDYLLGP 110



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L     +      V +   + D+ + +        L   G+   +      + G + K
Sbjct: 473 DELGLRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLD-DRQASPGVKFK 531

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    P  ++ G    + G+++++D   G+
Sbjct: 532 DAELLGMPWIVVVG-RGWADGVVELRDRFSGQ 562


>gi|305680817|ref|ZP_07403624.1| glycine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659022|gb|EFM48522.1| glycine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 459

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/261 (11%), Positives = 60/261 (22%), Gaps = 35/261 (13%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS--STIVRG 298
            +F+    E    E+   V  + A EK    +    +     G N + ++        R 
Sbjct: 199 GNFIFRTREFEQMEIEYFVSPSDAPEKFQEWVDACWDWFIDLGINPDNMRQFDVPKEERA 258

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVV---------------------FGSVGGGGRYDGL 337
                   +E   GF      +   V                     F  V G      +
Sbjct: 259 HYSAGTIDFEYRFGFAGSEWGELMGVANRTDYDLGSHIKYSGEDLSYFDQVTGERYVPYV 318

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLE-------SSTNNIKEMGPVLITTMDHDSDSL 390
           +    G       F         A  +            +       V +  +      L
Sbjct: 319 IEPSFGLTRAMMAFLCDAYHEDEAPNAKGGVDKRTVLRLDRRLAPVKVAVLPLSKKDTLL 378

Query: 391 SKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
              +     LR    I        +   G + +  D    P  +           + +++
Sbjct: 379 PTAEAIAADLRKLWNI----DYDIAGAIGRRYRRQDEIGTPFCVTVDFDSLEDRSVTVRE 434

Query: 450 LAKGKELSREIKNNESWREAR 470
                +    I    ++  AR
Sbjct: 435 RDTMAQERVAIDELPAYLGAR 455


>gi|121591402|ref|ZP_01678683.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121546739|gb|EAX56913.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80]
          Length = 642

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++             Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 VVVNITDKQADYAHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  +  +A +A   + + E
Sbjct: 603 EAGEIAVRTRKGKDLGKFKLDDFIAHIQAEIASRKLNLEE 642



 Score = 41.0 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 43/167 (25%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V      +       K
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK 420


>gi|147671507|ref|YP_001215778.1| threonyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262168212|ref|ZP_06035910.1| threonyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|172047342|sp|A5EZ18|SYT_VIBC3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146313890|gb|ABQ18430.1| threonyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227014955|gb|ACP11164.1| threonyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262023455|gb|EEY42158.1| threonyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 642

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++             Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 VVVNITDKQADYAHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  +  +A +A   + + E
Sbjct: 603 EAGEIAVRTRKGKDLGKFKLDDFIAHIQAEIASRKLNLEE 642



 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/167 (8%), Positives = 44/167 (26%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR+    YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSVFRELEIFIRHKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V      +       K
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK 420


>gi|291556422|emb|CBL33539.1| glycyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 458

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/230 (7%), Positives = 58/230 (25%), Gaps = 12/230 (5%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
              +   +  K  +       E + + +  ++     ++       +    +        
Sbjct: 233 DWFYFWKDYCKKWLLSLGINEENLRLRDHDKEELCFYSKATTDFEYLFPFGWGELWGVAD 292

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +    +              +  V      ++        ++ +  A    +   
Sbjct: 293 RTDYDLTQHIKTSGQKMEYFDPETNEKYVPYVIEPSLGVERL--FLAVITEAYDEEQLED 350

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE-------MFLGSSKNFGNQLK 422
              + +           +  L   +        AG  A+       +    +   G + +
Sbjct: 351 GTTRNVMHFHPYLAPVKAAVLPLSKKLANK---AGEIADELSKYFCVDYDDAGAIGKRYR 407

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             D    P  I         G + +++    K+    I + + + E ++A
Sbjct: 408 RQDEIGTPFCITYDFDSVEDGCVTVRERDSMKQERMPIADVKKYIEDKIA 457


>gi|296121907|ref|YP_003629685.1| glycyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296014247|gb|ADG67486.1| glycyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 551

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 27/98 (27%), Gaps = 2/98 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +       V I  +        K     +  + AGI A          G + +  D    
Sbjct: 451 HPRLAPVKVAIFPLIKKDGMPEKAAEIYREFKRAGITA--AYDQQAAIGRRYRRMDEIGT 508

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           P  I       S   + I++    +++   +K      
Sbjct: 509 PYCITVDGDTMSADTVTIRNRDTLEQIRLPVKEVVDHI 546


>gi|198275270|ref|ZP_03207801.1| hypothetical protein BACPLE_01429 [Bacteroides plebeius DSM 17135]
 gi|198271853|gb|EDY96123.1| hypothetical protein BACPLE_01429 [Bacteroides plebeius DSM 17135]
          Length = 496

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 8/115 (6%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  + + L    +K +     LR+ GI  +     +K  G   
Sbjct: 293 GLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVNKLRSMGISVKYDNADNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           K+AD   +  P+ ++ G  +     ++I      ++ +R     E + +  + +I
Sbjct: 351 KFADYELKGVPVRLVMGGRDLENNTMEIMRRDTLEKETRSCDGIEEYVQNLLEEI 405


>gi|168335374|ref|ZP_02693468.1| glycyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 460

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/228 (7%), Positives = 57/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +       + K  +       + + + +  ++   + +             +       +
Sbjct: 235 EWFVTWKNICKSWLLNLGIDEKSIRMRDHAKEELSHYSNATSDIEFKFPFGWGELWGIAS 294

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE--- 366
              + +    +      +       +  +      ++ A   ++         +SLE   
Sbjct: 295 RTDYDLKQHMEHSGEDMNYFDPTTNEKYIPYCIEPSLGADRVTLAFLCEAYCEESLEDGD 354

Query: 367 --SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
             +       + PV    +        +      ML       E     + + G + +  
Sbjct: 355 SRNIFKFHPALAPVKAAILPLSKKLSEQALNIYNMLSDH-FNVE--YDEAGSIGKRYRRQ 411

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  I      +    + I+D    K+    I     +   ++ 
Sbjct: 412 DEIGTPFCITYDFDSKDDNSVTIRDRDSMKQERINIXEILKYITKKID 459


>gi|153827549|ref|ZP_01980216.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|153829051|ref|ZP_01981718.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229514759|ref|ZP_04404220.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229522960|ref|ZP_04412374.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229526102|ref|ZP_04415506.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229527753|ref|ZP_04417144.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|254284959|ref|ZP_04959925.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|148875480|gb|EDL73615.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|149738482|gb|EDM52878.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|150424962|gb|EDN16739.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|229334115|gb|EEN99600.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229336260|gb|EEO01278.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229340177|gb|EEO05185.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229348739|gb|EEO13697.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|327485485|gb|AEA79891.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
 gi|327485490|gb|AEA79896.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 642

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++             Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 VVVNITDKQADYAHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  +  +A +A   + + E
Sbjct: 603 EAGEIAVRTRKGKDLGKFKLDDFIAHIQAEIASRKLNLEE 642



 Score = 41.0 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 43/167 (25%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V      +       K
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK 420


>gi|323490068|ref|ZP_08095289.1| glycyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396364|gb|EGA89189.1| glycyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 458

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/242 (7%), Positives = 58/242 (23%), Gaps = 16/242 (6%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      +  K  +       + + + E       + +   +       
Sbjct: 222 LEFFCKPGEDLEWYAYWRDFSKNWLLNLNMNEDNMRLREHDEDELSHYSNATVDIEYKFP 281

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           F +    +             Y   V+  +                
Sbjct: 282 FGWGELWGIADRTDFDLKRHMEYSGE------DFNYIDPVTNERFVPYCIEPSLGADRVT 335

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA--GIRAE------MF 410
           +  L           +    ++      +   +     ++ L     G+ A+      + 
Sbjct: 336 LAFLVDAYHEEALENDDKRTVLKFHPALAPYKAAVLPLSKKLAEGATGVFADLAKHFMVD 395

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              S++ G + +  D    P  I         G + ++     ++    I   +++ E  
Sbjct: 396 YDESQSIGKRYRRQDEIGTPFCITYDFDSVEDGQVTVRHRDSMEQTRMPIAEVQAYIEKH 455

Query: 471 VA 472
           + 
Sbjct: 456 IQ 457


>gi|242398937|ref|YP_002994361.1| Glycyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|259511937|sp|C6A317|SYG_THESM RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|242265330|gb|ACS90012.1| Glycyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 570

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/99 (10%), Positives = 23/99 (23%), Gaps = 2/99 (2%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
                  V +  +       S      + L+  G             G +    D    P
Sbjct: 470 KDMAPIEVAVLPLVAKEPLTSIAYEIFRTLQKEGFIV--VYDEKDTVGRRYARYDEIGTP 527

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             +           + I+D    +++  +I+        
Sbjct: 528 YCVTIDNQTPEDNTVTIRDRDTREQIRVKIEELPEKLRE 566


>gi|269860011|ref|XP_002649729.1| threonyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511674|sp|B7XIA1|SYTC_ENTBH RecName: Full=Probable threonyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS
 gi|220066924|gb|EED44394.1| threonyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 634

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                + I NR+++ +R  Y   GF  + TP + + D L K         + ++ +    
Sbjct: 261 WLPDGVVIYNRLMEFLRKEYIKRGFKEVITPNIFHID-LWKESGHYQNYKENIYGI---S 316

Query: 78  GQWISLRYDLTAP 90
           G+  +L+      
Sbjct: 317 GEDFALKPMNCPG 329



 Score = 40.6 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 45/166 (27%), Gaps = 32/166 (19%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           + L        +           + + ++S             V + T+D   ++     
Sbjct: 491 NELGMYETPVIIHRAILGSFERFIAILIESYGKHLPFWLHPRQVGLVTIDCKHENYMYTV 550

Query: 395 MYTQMLRTAGIRAEMFLGSSK------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                   + +   + LG  K          +++ A    C +  I G  E  +  + ++
Sbjct: 551 E------KSMLNVVLDLGIRKYTDPKDTLNKKIRKATLDGCKIICILGDKEMEKNEVNVR 604

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
                                     T  I EL+  +K  ++  KE
Sbjct: 605 --------------------IGNKTRTYKIEELLEKIKVSIETKKE 630


>gi|152967313|ref|YP_001363097.1| glycyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151361830|gb|ABS04833.1| glycyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 462

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 25/91 (27%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +     K +     LR      E     +   G + +  D    P  I      
Sbjct: 371 VFPLSRNEQLSPKARDLAAELRR-NWNVEFD--DAGAIGRRYRRHDEVGTPYCITVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++     +    +    SW  AR
Sbjct: 428 LEDEAVTIRERDTMAQERVGLTQVTSWLGAR 458


>gi|291167027|gb|EFE29073.1| glycine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 463

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/245 (11%), Positives = 58/245 (23%), Gaps = 22/245 (8%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  K      E  K  +        L +  + +R   +    +   S     
Sbjct: 227 LEFFCAPGEDLKWFEYWKEYCKNFLLS------LGIQVDNLRLRDHAPEELSHYSNATTD 280

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
            EY     +  + G     +          G   +Y    +  K                
Sbjct: 281 FEYKFPFGWGELWGIADRTDFDLKQHMEHSGVDMKYQDPTTNEKYIPYCIEPSLGADRVT 340

Query: 359 IVAL------KSLE-----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
           +  L      + LE     +       + P     +              Q L       
Sbjct: 341 LAFLIDAYDEEELEDGTVRNVLRFHPALAPFKAAVLPLTKKLSEPATELFQDL-AKYFNV 399

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
                 + + G + +  D    P  I           + ++D    +++   I   +S+ 
Sbjct: 400 --DYDETGSIGKRYRRHDEAGTPFCITFDFDSLEDKCVTVRDRDTMEQVRMPIAELKSYI 457

Query: 468 EARVA 472
           E  + 
Sbjct: 458 EESLQ 462


>gi|303257521|ref|ZP_07343533.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|331000214|ref|ZP_08323898.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|302859491|gb|EFL82570.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|329572380|gb|EGG54033.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 641

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 17/109 (15%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQLKY 423
              + PV +   +   D     +    ML+ AG+RAE  L + K        +       
Sbjct: 533 PPWLAPVQVAVANITDDQADYAKEVVSMLKKAGLRAEADLRNGKITYKIRELSLQKL--- 589

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                 P  ++ G  E++ G + ++        +  +++     +  VA
Sbjct: 590 ------PYILVVGAKEKAEGKVAVRVRGGKDLGAMSVEDFIKLVQEDVA 632



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +  ++   +R +Y++  +  ++ P L    SL +      +  + +F+ 
Sbjct: 261 GLIFWHARGWALWQQVEQYMRRVYQDNDYQEVKAPQL-LDRSLWEKSGHWSKYKENMFT- 318

Query: 74  QDDDGQWISLRYDLTAP 90
            + + ++ +L+      
Sbjct: 319 TESENRYYALKPMNCPG 335


>gi|226355442|ref|YP_002785182.1| prolyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226317432|gb|ACO45428.1| putative Proline--tRNA ligase (prolyl-tRNA synthetase) [Deinococcus
           deserti VCD115]
          Length = 499

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       V++  +    +    + + +     LR  G+R ++         N  K
Sbjct: 293 GLIMPPRIAPIQVVVIPVGRKDNFDAMVQEAEQLAGELRALGLRVKVDKRDG--VTNGFK 350

Query: 423 YAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           Y D   +  P+ I  G  +  +G++ +K     ++ + E     S   AR+  I
Sbjct: 351 YNDWELKGVPVRIELGPRDLEQGVVVVKGRNSEEKETLERAEAVSGMTARLDGI 404


>gi|119498573|ref|XP_001266044.1| glycyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119414208|gb|EAW24147.1| glycyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 656

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 27/97 (27%), Gaps = 5/97 (5%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VLI  +   +            LR  GI   +   SS + G   +YA  D    P  
Sbjct: 539 PTKVLIVPLSTHASFRPLLLQLMTKLRRMGISNRVD-DSSASIGK--RYARNDELGTPFG 595

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           I             ++D    K++            +
Sbjct: 596 ITVDFQSVKDNTFTLRDRDTTKQVRASEDEILQAIRS 632


>gi|50553074|ref|XP_503947.1| YALI0E14597p [Yarrowia lipolytica]
 gi|49649816|emb|CAG79540.1| YALI0E14597p [Yarrowia lipolytica]
          Length = 656

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 5/89 (5%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VL+  +    +     Q  ++ LR A I A++   SS + G   +YA  D    P  
Sbjct: 539 PTKVLVVPLSSQKELAPFTQEVSKKLRQARISAKVD-DSSASIGK--RYARNDEMGTPFG 595

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIK 461
           I           + +++    +++   I 
Sbjct: 596 ITVDFDTVKDNSVTLRERDSTRQVRGSID 624


>gi|291398043|ref|XP_002715638.1| PREDICTED: threonyl-tRNA synthetase 2, mitochondrial [Oryctolagus
           cuniculus]
          Length = 718

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
              +  R+ N ++  IR  Y + GF  ++TP L +S  L +     +   + +F+LQ
Sbjct: 324 FLPRGTRVYNALVAFIRAEYAHRGFSEVKTPTL-FSTKLWEKSGHWEHYKEDMFALQ 379



 Score = 40.2 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 40/111 (36%), Gaps = 3/111 (2%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P  +  +   ++     +   Q L+ AG+ +++          +++ A   +  
Sbjct: 607 WPLWLSPFQVAVIPVGTEQEEYAREVQQTLQAAGLASDLDADPGLTLSRRVRRAQLAHYN 666

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT-IPISE 480
              + G  E+S   + ++      +   E    E+ R     Q T +P +E
Sbjct: 667 FQFVVGRKEQSNRTVNVRTRDN--QRLGERGLAEATRRLLELQNTRVPNAE 715


>gi|229827512|ref|ZP_04453581.1| hypothetical protein GCWU000182_02901 [Abiotrophia defectiva ATCC
           49176]
 gi|229788450|gb|EEP24564.1| hypothetical protein GCWU000182_02901 [Abiotrophia defectiva ATCC
           49176]
          Length = 462

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/228 (7%), Positives = 57/228 (25%), Gaps = 8/228 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  H   +  K  +       E + + +   +     ++       +    +        
Sbjct: 237 EWFHYWRQFCKDWLISLGMKEEEMRLRDHDPEELSFYSKGTTDIEFLFPFGWGELWGIAD 296

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +   ++            + +  +      ++ A   ++         + LE   
Sbjct: 297 RTDYDLGRHQEISGEPMEYFDDEKKEKYIPYVVEPSLGADRVTLAFLCGAYDEEELEGGD 356

Query: 370 NN-----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV +  +          +     L +     E         G + +  
Sbjct: 357 VRTVLRFHPFLAPVKVAVLPLSKKLGEGAEKVFAEL-SKDWNCE--YDDRGAIGKRYRRQ 413

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           D    P  I       + GM+ ++D    ++    I    ++   +  
Sbjct: 414 DEIGTPFCITYDFDSETDGMVTVRDRDSMEQERVAISELRNYFREKFE 461


>gi|15601053|ref|NP_232683.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|153817556|ref|ZP_01970223.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227811910|ref|YP_002811920.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229506559|ref|ZP_04396068.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229510645|ref|ZP_04400125.1| threonyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229517224|ref|ZP_04406669.1| threonyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229606038|ref|YP_002876742.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254850514|ref|ZP_05239864.1| threonyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255745914|ref|ZP_05419861.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262163529|ref|ZP_06031275.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|298500133|ref|ZP_07009939.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|22654144|sp|Q9KMN7|SYT_VIBCH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783545|sp|C3LUV8|SYT_VIBCM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9657684|gb|AAF96196.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126511981|gb|EAZ74575.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227011052|gb|ACP07263.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229345260|gb|EEO10233.1| threonyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353090|gb|EEO18030.1| threonyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229356910|gb|EEO21828.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229372524|gb|ACQ62946.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846219|gb|EET24633.1| threonyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255735668|gb|EET91066.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262028096|gb|EEY46755.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297542114|gb|EFH78165.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 642

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++             Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 VVVNITDKQADYAHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  +  +A +A   + + E
Sbjct: 603 EAGEIAVRTRKGKDLGKFKLDDFIAHIQAEIASRKLNLEE 642



 Score = 41.0 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 43/167 (25%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V      +       K
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK 420


>gi|2191162|gb|AAB61048.1| Similar to threonyl-tRNA synthetase; coded for by A. thaliana cDNA
           R65376 [Arabidopsis thaliana]
          Length = 702

 Score = 46.4 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
              +L  G         R+ NR++D I+N Y + G+  + TP +   + L +     D  
Sbjct: 308 FSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTEVITPNMYNME-LWQTSGHADNY 366

Query: 67  NKGVFSLQDDDGQWISLRYDLTAP 90
              +F+   +  Q   L+      
Sbjct: 367 KDNMFTFNIEK-QEFGLKPMNCPG 389



 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/140 (9%), Positives = 38/140 (27%), Gaps = 14/140 (10%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+  +            ++  +     S    +   + ++ AG  
Sbjct: 564 HRAVLGSVERMFAILLEHYKGKWPFWISPRQAIVCPIS--EKSQQYAEKVQKQIKDAGFY 621

Query: 407 AEMFLGSSKNFGN--------QL----KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            +  L   K            +     + A        ++ G  E + G + ++      
Sbjct: 622 VDADLTDRKIDKKVNDFGSCSKFCSVVREAQLAQYNYILVVGETEAATGQVSVRVRDNAA 681

Query: 455 ELSREIKNNESWREARVAQI 474
              + I++     +A+ A+ 
Sbjct: 682 HSVKSIEDLLEEFKAKTAEF 701


>gi|282859312|ref|ZP_06268424.1| proline--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587892|gb|EFB93085.1| proline--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 493

 Score = 46.4 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 71/257 (27%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L V ++   K         + S   R          EA+
Sbjct: 173 WQEGHTAHATKEEAEKEAKLMLKVYADFAEKWLAVPVIQGVKSETERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           +++               +RLI AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGVSTRLIGALIMTHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L     K Q     LR AGI  +     +K  G   
Sbjct: 293 GLVLPPKIAPIQVVIVPIFKGEEQLQQLTDKLQPVIDDLREAGITVKFDNSDNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+AD   +  P+ +  G  +     +++                   R   + + ++   
Sbjct: 351 KFADYELKGVPVRLAMGGRDLENNTIEV------------------MRRDTLEKESVSFD 392

Query: 480 ELVSTVKKILQENKEEI 496
            +   VK +L + ++ I
Sbjct: 393 GIADYVKNLLNDIQDNI 409


>gi|254584943|ref|XP_002498039.1| ZYRO0G00704p [Zygosaccharomyces rouxii]
 gi|238940933|emb|CAR29106.1| ZYRO0G00704p [Zygosaccharomyces rouxii]
          Length = 681

 Score = 46.4 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 38/104 (36%), Gaps = 18/104 (17%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L+ AG+RA      +   G +    + +  PL +  G  +     + +     
Sbjct: 492 AREIESRLKKAGVRAFGDYNDNYTPGWKFAQYELKGIPLRLESGPKDIESNQVTV----- 546

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                         R     ++T+ + EL + + ++L+E + ++
Sbjct: 547 -------------VRRNDFRKVTVKLDELETRIPELLEELQRDL 577


>gi|117928006|ref|YP_872557.1| glycyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117648469|gb|ABK52571.1| glycyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 465

 Score = 46.4 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  + D   K +     LR      E    ++   G + +  D    P  +    
Sbjct: 372 VAVLPLSRNPDLSPKARDIAAELRKY-WNVEFDDAAA--IGRRYRRQDEIGTPYCVTVDF 428

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              +   + ++D    K+    I     +   R
Sbjct: 429 DTLNDQAVTVRDRDSMKQERVGIDALVGYLTER 461


>gi|224419073|ref|ZP_03657079.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142583|ref|ZP_07804776.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131614|gb|EFR49231.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 573

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 14/128 (10%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD------HDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+         +K         +D       D +     +     L   
Sbjct: 448 CYGIGISRLLAAIIEQNHDEKGMKWTATTAPFLLDIVVSNIKDENQSELAEKIYHALSAN 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI---KDLAKGKELSREI 460
           GI   +     + +G ++   +    P A+I G G    G +++   K+L   ++++ EI
Sbjct: 508 GIECLLDDRKER-YGAKMADFELIGIPYALIVGKG-VEEGKIELVCRKNL---EKINLEI 562

Query: 461 KNNESWRE 468
            + ES  E
Sbjct: 563 ADFESLIE 570



 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 12/110 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      ++ ++I   ++N  +  G + +     TP      SL +     DR
Sbjct: 34  QIGSGIYNFLPLGKKVLDKISRIVKNKMDEAGANEVLLGCVTPA-----SLWQASGRYDR 88

Query: 66  PNKGVFSLQDDDGQWISLRY--DLTAP-LARYVAENFDTIVFPCRTYRIG 112
             K +   +D            + T   LA+   +++  +       +  
Sbjct: 89  YGKELLRFKDRKENEFVFGPTHEETITELAKTYIKSYKQLPLHFYQIQTK 138


>gi|114659237|ref|XP_510628.2| PREDICTED: threonyl-tRNA synthetase-like 2 [Pan troglodytes]
          Length = 801

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 34/124 (27%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ S          + P  +  +             +      G  A++ L  +  
Sbjct: 676 ERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMADVDLDHNCT 735

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              +++ A        ++ G  E+    + ++           + +     +      T+
Sbjct: 736 LNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTRDNKIHGEILVTSAIDKLKNLKKTRTL 795

Query: 477 PISE 480
              E
Sbjct: 796 NAEE 799



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D IR  Y    F  + +P + Y+  L +        ++ +F+ + + 
Sbjct: 424 FLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNM-YNSKLWEASGHWQHYSENMFTFEIEK 482

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 483 D-TFALKPMNCPGHCLMFAHR 502


>gi|73951035|ref|XP_857273.1| PREDICTED: similar to threonyl-tRNA synthetase-like 2 isoform 5
           [Canis familiaris]
          Length = 687

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + ++  L +        ++ +F+  D +
Sbjct: 421 FLPRGAFIYNTLMDFIREEYHRRNFTEVLSPNM-FNSKLWETSGHWQHYSENMFTF-DIE 478

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 479 KDTFALKPMNCPGHCLMFAHR 499


>gi|297579610|ref|ZP_06941537.1| threonyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535256|gb|EFH74090.1| threonyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 642

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++             Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 IVVNITDKQADYAHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  +  +A +A   + + E
Sbjct: 603 EAGEIAVRTRKGKDLGKFKLDDFIAHIQAEIASRKLNLEE 642



 Score = 41.0 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 43/167 (25%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V      +       K
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK 420


>gi|261212792|ref|ZP_05927076.1| threonyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260837857|gb|EEX64534.1| threonyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 642

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++             Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 VVVNITDKQADYAHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +     +A +    + + E
Sbjct: 603 EAGEIAVRTRKGKDLGKFKLDDFIEHIQAEIVSRKLNLEE 642



 Score = 41.0 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 43/167 (25%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V      +       K
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK 420


>gi|219113189|ref|XP_002186178.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583028|gb|ACI65648.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 684

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +                    G+R E+  GS +    Q++ A++   P+  + G  E   
Sbjct: 575 LPVTDAVHEYCNEIAAKALKMGLRIEVDRGSER-LAKQIRNAEQARIPVMAVVGMKEMES 633

Query: 443 GMLQIKDLAKGKELSREIKNNESWRE 468
             L ++    G   S E+++  S  +
Sbjct: 634 NSLAVRSRKLGDLGSFEVEDLLSELK 659



 Score = 41.4 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++R  I D  ++ +   G+D + +P +   D L K     D     +F  
Sbjct: 291 GLVFWHPKGSKVRRMIEDFWKDAHIQDGYDVVYSPHIANID-LWKTSGHFDFYRADMFDQ 349

Query: 74  QDDDGQWISLRYDLTA 89
            D + +   ++     
Sbjct: 350 MDVENEQYQIKPMNCP 365


>gi|153835364|ref|ZP_01988031.1| threonyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868112|gb|EDL67276.1| threonyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 642

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 77/265 (29%), Gaps = 10/265 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   + +  E  + +              +   +        G +E+   SE   
Sbjct: 383 DDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDNIVVKLSTRPEKRVGSDEIWDQSEEAL 442

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYD 335
           K    S  I        G  Y     +        ++   +              G  Y 
Sbjct: 443 KQSLESMEIPYEIQEGEGAFYGPKIEFTLY---DCLDRAWQCGTVQLDFNLPGRLGATYV 499

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G  +      +        + R I  L    +            I  M+         Q 
Sbjct: 500 GENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAIL-MNITDKQSDYVQE 558

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             Q L+ +GIRA+  L  ++  G +++    +  P  ++ G  E   G + ++       
Sbjct: 559 VVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDL 617

Query: 456 LSREIKNNESWREARVAQITIPISE 480
              ++ +  ++ +  ++   + + E
Sbjct: 618 GKFKVDDFIAYIQDEISSRKLNLEE 642



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 45/152 (29%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +L+        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   + + ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQEEVTNCIKMV 405


>gi|162329880|pdb|2E3C|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase
 gi|185177681|pdb|2ZCD|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Amppnp
 gi|185177682|pdb|2ZCE|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Pyrrolysine And An Atp
           Analogue
 gi|215794561|pdb|2ZIN|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Boclys And An Atp
           Analogue
 gi|215794562|pdb|2ZIO|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Aloclys-Amp And Pnp
          Length = 291

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 7/133 (5%)

Query: 28  RILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED-RPNKGVFSLQDDDGQWISLRYD 86
           ++   I   + + GF  I++P+L   + + +   D D   +K +F + D +     LR  
Sbjct: 82  KLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV-DKN---FCLRPM 137

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
           L   L  Y+ +    +  P + + IGP +R E  G     +F    ++     +      
Sbjct: 138 LAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTM--LNFCQMGSGCTREN 195

Query: 147 MCMMMADTLEAVG 159
           +  ++ D L  +G
Sbjct: 196 LESIITDFLNHLG 208


>gi|78185232|ref|YP_377667.1| prolyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|114152270|sp|Q3AWR9|SYP_SYNS9 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78169526|gb|ABB26623.1| Prolyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 593

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 2/75 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         ++  RI   +R+     G      P L  ++   +    +        +
Sbjct: 37  SGIYGYLPLMWKVIQRITAIVRDELNTAGAQETLLPQLHPAELWQRSGRWQGYTAGEGIM 96

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G+ + L  
Sbjct: 97  FHLEDRQGRELGLGP 111



 Score = 43.7 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 87/303 (28%), Gaps = 24/303 (7%)

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLR-AIDKLDKFGLQGVKLLLGEGRTDNS 223
                 ++  L  +L  I    D      LI LR   D  +   +  V  L G+   D  
Sbjct: 269 CRSHGWHQSQLIKVLLFIARLDDGVEQPLLISLRGDQDLNEVKLINAVGRLSGQEVLD-- 326

Query: 224 GDFTKGANLTSEQIDIM-VSFLSIDLEKSMH-----ELYELVKGTIAGEKGFNELVVISE 277
               +  +L  + ID + + F+  DL+  +         + ++ T +     + +V  + 
Sbjct: 327 CRPIQTEDLNKQGIDTIPLGFIGPDLDDGVLRSARSWTKQFLRCTDSTAAAMDRMVCGAN 386

Query: 278 LVRKSG----YNSNRIKISSTIVRGLEYYTGCVY--EAILGFPVMNEKQKPVVFGSVGGG 331
              +      +        S  +R       CV+  EA L      E       G     
Sbjct: 387 QPDQHRLYATWADLGGAPKSLDLRKARAGEACVHNPEAHLIEKRGIEVGHIFQLGRKYSE 446

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLESSTNNIKEMGPVLITTMDH 385
                  +          G        +                         ++   + 
Sbjct: 447 AMDSRFTNEAGKTEHFWMGCYGIGISRLAQAAVEQHHDDAGICWPAAIAPYEAIVVVANM 506

Query: 386 DSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
              + ++  +   + L  AG+ A       +  G + K AD    P  ++ G    S G+
Sbjct: 507 QDQTQAELGESLYKQLLAAGVDALFDDRKERA-GVKFKDADLIGIPWRVVVGRD-ASDGV 564

Query: 445 LQI 447
           +++
Sbjct: 565 VEL 567


>gi|239993779|ref|ZP_04714303.1| threonyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 638

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 1/99 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M+             + L+  G RA+  L  ++  G +++    +  P  ++ G  
Sbjct: 541 QVVVMNITDKQAEYASDCVKKLQELGFRAKSDL-RNEKIGFKIREHTLKRIPYMLVVGDK 599

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           E   G + ++           +++  +  +  V + TI 
Sbjct: 600 EMEAGEVAVRSRRGDDLGKMRLEDFIAMAQQEVVEKTIK 638



 Score = 43.7 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 11/107 (10%), Positives = 31/107 (28%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   +   +R     YG+D ++ PL+       K     D+  + +F+ 
Sbjct: 262 GMVFWHNDGWSIYTELESYVRKKLREYGYDEVKGPLMMDRSLWEKS-GHWDKYAENMFT- 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +                 + 
Sbjct: 320 TESEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEP 366


>gi|121730168|ref|ZP_01682562.1| threonyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628087|gb|EAX60627.1| threonyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 153

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++             Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 55  VVVNITDKQADYAHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 113

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  +  +A +A   + + E
Sbjct: 114 EAGEIAVRTRKGKDLGKFKLDDFIAHIQAEIASRKLNLEE 153


>gi|253828011|ref|ZP_04870896.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511417|gb|EES90076.1| prolyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 578

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 14/128 (10%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD------HDSDSLSKYQMYTQMLRTA 403
            + IGISRL+ A+         +K         +D       D +     +     L   
Sbjct: 448 CYGIGISRLLAAIIEQNHDEKGMKWTATTAPFLLDIVVSNIKDENQSELAEKIYHALSAN 507

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI---KDLAKGKELSREI 460
           GI   +     + +G ++   +    P A+I G G    G +++   K+L   ++++ EI
Sbjct: 508 GIECLLDDRKER-YGAKMADFELIGIPYALIVGKG-VEEGKIELVCRKNL---EKINLEI 562

Query: 461 KNNESWRE 468
            + ES  E
Sbjct: 563 ADFESLIE 570



 Score = 43.3 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 12/110 (10%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      ++ ++I   ++N  +  G + +     TP      SL +     DR
Sbjct: 34  QIGSGIYNFLPLGKKVLDKISRIVKNKMDEAGANEVLLGCVTPA-----SLWQASGRYDR 88

Query: 66  PNKGVFSLQDDDGQWISLRY--DLTAP-LARYVAENFDTIVFPCRTYRIG 112
             K +   +D            + T   LA+   +++  +       +  
Sbjct: 89  YGKELLRFKDRKENEFVFGPTHEETITELAKTYIKSYKQLPLHFYQIQTK 138


>gi|164685973|ref|ZP_01946163.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218739|ref|YP_002305526.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|164601497|gb|EAX33218.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013001|gb|ACJ20381.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 660

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 40/351 (11%), Positives = 98/351 (27%), Gaps = 7/351 (1%)

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           + +     +  ++    +       D + ++ ++   Y I   +      I  +      
Sbjct: 298 YQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYR 357

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D                   L G+ + L     D++  F     + SE    +     + 
Sbjct: 358 DLPLRYAEFGACHRNEPSGTLHGL-MRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVY 416

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +    E+   +        G +E+   +E      +N   ++       G  Y     +
Sbjct: 417 ADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEAFNRKGVEWDILPGEGAFYGPKIEF 476

Query: 308 EAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                   + +              G        S+     +           L + L+ 
Sbjct: 477 SLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGILLEE 536

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV +  M+             + L+  GIRA   L  ++  G +++  
Sbjct: 537 SAGKLPLW--LAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDL-RNEKIGFKIREH 593

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
                P  ++ G  E +   L ++ L      +  ++      +A ++Q +
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAEISQRS 644



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            + E P G          I  ++ + IR+I   YG+  + TP L  + SL       ++ 
Sbjct: 264 FQPESP-GNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDA-SLWDKSGHLEKF 321

Query: 67  NKGVFSL 73
              +FSL
Sbjct: 322 GDDIFSL 328


>gi|290960578|ref|YP_003491760.1| glycyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260650104|emb|CBG73220.1| glycyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 460

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 27/94 (28%), Gaps = 5/94 (5%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           V +  +  + +   K +     LR    I        +   G + +  D    P  +   
Sbjct: 367 VAVLPLSRNPELSPKAKGLAAALRQNWNI----DFDDAGAIGRRYRRQDEIGTPYCVTVD 422

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                   + +++    K+    +   E +   R
Sbjct: 423 FDTLDDNAVTVRERDSMKQERVSLDQIEGYLAGR 456


>gi|254454059|ref|ZP_05067496.1| ATP phosphoribosyltransferase regulatory subunit [Octadecabacter
           antarcticus 238]
 gi|198268465|gb|EDY92735.1| ATP phosphoribosyltransferase regulatory subunit [Octadecabacter
           antarcticus 238]
          Length = 366

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 51/345 (14%), Positives = 102/345 (29%), Gaps = 40/345 (11%)

Query: 49  LLEYSDSLGKFLPDEDRPNKGVFSLQDD-DGQWISLRYDLTAPLARYVAENFDTIVFPCR 107
           +L+ + +L     ++ R     F+ QD   G+ + LR D T P+   V ++      P R
Sbjct: 35  VLQPAGTLLDLYGEDIRAR--TFTTQDPLRGEQM-LRPDFTVPI---VQQHMAFGAEPAR 88

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD----------TLEA 157
              +G VFR ++    R  +F+Q   +        A                        
Sbjct: 89  YTYVGKVFRKQESDETRPTEFVQVGFEVFDGKDVAAADAEVFATFAGILAGVSVTPMTGD 148

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI----------VLRAIDKLDKFG 207
           +GI R          +    ++  +      +                     +      
Sbjct: 149 IGILRAAVIGLKTTERRRAALMRHLWRPRRFRALLDRFGAVTPTPAARTALLANPDPMAT 208

Query: 208 LQGVKLLLGEG----RTDNSGDFTKGANLTSEQIDIMVSFLSID--LEKSMHELYELVKG 261
           L  V  L  +     R D          ++S + D++ + L +      ++  L ++   
Sbjct: 209 LPAVLGLRSKSEIALRIDALRADAAVDPISSFERDLLDALLKVRETAPNALASLRDISVD 268

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK 321
             +     + L    + +   G + + +   +   R          E   GF        
Sbjct: 269 LPSISAAIDGLSRRLDALANRGIDVDALPFETAYGR-------TSMEYYDGFVFGFSSNA 321

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
            +    V  GGRYD L     G         +    L+  L++ +
Sbjct: 322 GLNIPPVATGGRYDALTVVLGGGTGVPAVGGVIRPDLVAYLEAAQ 366


>gi|163942630|ref|YP_001647514.1| glycyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229135744|ref|ZP_04264516.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|163864827|gb|ABY45886.1| glycyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228647710|gb|EEL03773.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 458

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 57/238 (23%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +       + +           
Sbjct: 223 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEDELSHYSNATTDIEFRFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|325268781|ref|ZP_08135407.1| glycyl-tRNA synthetase beta subunit [Prevotella multiformis DSM
           16608]
 gi|324988886|gb|EGC20843.1| glycyl-tRNA synthetase beta subunit [Prevotella multiformis DSM
           16608]
          Length = 515

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/234 (7%), Positives = 48/234 (20%), Gaps = 29/234 (12%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP------VMNEKQKPVVFG 326
                     G      +                 E  + F       + +     +   
Sbjct: 287 KHRLAWHEALGMGDENYRFHDHEKLAHYANAATDIEFHMPFGFKEVEGIHSRTDFDLSQH 346

Query: 327 SVGGGGRYDGLVSRFKGQNVP-----------ATGFSIGISRLIVALKS----LESSTNN 371
               G +             P                +  S     L++    +      
Sbjct: 347 EKFSGRQIKYFDPERNESYTPYDVETSIGVDRMFLSVMCHSYTEEQLENGSSRIVLKLPE 406

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  + +      K +     L          + +  + G + +  D    P 
Sbjct: 407 PLAPVKCAVLPLVNKDGLPEKAREIVNSL---KFHFNTHMEAKDSIGKRYRRQDAIGTPF 463

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
            +       +   + ++     K+    ++      E R     + I+ L+  +
Sbjct: 464 CVTVDGDTLNDNTVTLRYRDSMKQERVPVEKLREIIEDR-----VSITSLLKKI 512


>gi|302774721|ref|XP_002970777.1| hypothetical protein SELMODRAFT_94171 [Selaginella moellendorffii]
 gi|300161488|gb|EFJ28103.1| hypothetical protein SELMODRAFT_94171 [Selaginella moellendorffii]
          Length = 528

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 42/133 (31%), Gaps = 16/133 (12%)

Query: 363 KSLESSTNNIKEMGPVLITTM----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                          V+I  +    D     L        ++R AGIR ++     +  G
Sbjct: 320 DDKGLMLPPKLAPIQVVIVPIWKKGDEQEAVLQAAHKVESLVRAAGIRVKLDTFDQRTPG 379

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +  + + +  P+ I  G  + +   + +             + +   +  +   I +  
Sbjct: 380 WKFNHWELKGVPIRIEIGPKDVANNSVVV------------ARRDVPGKAGKEFGIFMDR 427

Query: 479 SELVSTVKKILQE 491
           S L+  ++  L +
Sbjct: 428 SVLIDHLRAKLDD 440


>gi|153877657|ref|ZP_02004322.1| Prolyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152065879|gb|EDN65678.1| Prolyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 183

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 3/112 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSD--SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                          V++  M            +     L++AGI         +  G  
Sbjct: 72  DEHGIIWPQSIAPFSVILLPMSMHKSQRLREAAEAMYNQLQSAGIDVLFDDRRERA-GVM 130

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              AD    P  ++ G     +G ++ K     K  S  +    S+ + ++ 
Sbjct: 131 FANADLIGIPHRLVIGESGLDKGEIEYKGRRDQKAHSIPMAEAVSFIQTQLQ 182


>gi|83309439|ref|YP_419703.1| threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|123740560|sp|Q2WAI1|SYT_MAGMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|82944280|dbj|BAE49144.1| Threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 638

 Score = 46.0 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/163 (9%), Positives = 46/163 (28%), Gaps = 1/163 (0%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R   E   ++ ++TP L    SL +     D+ ++ +F++
Sbjct: 263 GSVFWHKKGWTLYRAVESYMRRRLEANNYEEVKTPQLVDF-SLWEASGHADKFSESMFTI 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           +  D + ++++        +   +   +                 +              
Sbjct: 322 KTQDERHLAVKPMNCPCHVQIFRQGIKSYRDLPLRMAEFGSCHRYEPSGALHGIMRVRAF 381

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176
               +     + ++        + +     D+       K  D
Sbjct: 382 TQDDAHIFCTEDQITSETIAFCQLLKEVYTDFGFTDVRVKFSD 424



 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 97/340 (28%), Gaps = 24/340 (7%)

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
            D     +S         M    T +   +     +   + +    GI     L    ++
Sbjct: 300 VDFSLWEASGHADKFSESMFTIKTQDERHLAVKPMNCPCHVQIFRQGIKSYRDLPL--RM 357

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            E     R        G+  V+        D++  F     +TSE I        +  + 
Sbjct: 358 AEFGSCHRYEPSGALHGIMRVRA----FTQDDAHIFCTEDQITSETIAFCQLLKEVYTDF 413

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
              ++        A   G +E    +E        +  ++       G  Y      E +
Sbjct: 414 GFTDVRVKFSDRPAKRAGSDETWDKAESALLEASKAAGLETVLNPGEGAFYG--PKLEFV 471

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVS-----RFKGQNVPATGFSIGISRLIVALKSL 365
           L   +  + Q   +        R D         + +   +           L + +++ 
Sbjct: 472 LRDAIGRDWQCGTLQVDFVLPERLDAAYVAEDGAKKRPVMLHRAILGSFERFLGILIENF 531

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                       V++ T+  ++D     +     L+ AG+R E+ L + K     + Y  
Sbjct: 532 AGRFPLWLAPTQVVVATIVSEADDF--AREVEATLKAAGLRVELDLRNEK-----INYKV 584

Query: 426 RR----NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
           R       P+ ++ G  E     + I+ L    +    + 
Sbjct: 585 REHSVAKVPVMLVVGKREAESRQVAIRRLGSQNQEIVALD 624


>gi|291279885|ref|YP_003496720.1| threonyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754587|dbj|BAI80964.1| threonyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 640

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
           GIR E     ++  G +++ A  +  P  II G  E     + ++ L  G+
Sbjct: 565 GIRVEFD-SRNEKIGYKIREAQLQKIPHMIIIGNNEVEAKTVSVR-LRNGE 613



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 79/253 (31%), Gaps = 13/253 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K  RIR+ I    +  +   G++ + TP +    +L +         + ++S  D D
Sbjct: 264 WFPKGARIRSIIEAFWKEEHFKNGYEMLYTPHI-GKSTLWETSGHLAFYQENMYSPMDID 322

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
           G    ++  +  P       +        R+YR  P+   E     R+ +        + 
Sbjct: 323 GNEYFIKP-MNCPF------HIMIYKSKVRSYRDLPLRWAELGTVYRYERSGVLH-GLLR 374

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
               T D    +   + +     +  ++ + +      + I   I    +  + +  +  
Sbjct: 375 VRGFTQDDAHIICTQEQIIDEIKEVLNFSLRMWKAFGFESIKGYIATRPEKSVGDDAMWE 434

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
           +A   L+      +K    +   D  G    G  +  +  D +     +   +    L E
Sbjct: 435 KATQSLEG----AIKDSGIDFEIDEGGGAFYGPKIDLKIKDAIGREWQMTTIQFDFNLPE 490

Query: 258 LVKGTIAGEKGFN 270
               T   + G  
Sbjct: 491 RFDMTYIDKDGKE 503


>gi|282898000|ref|ZP_06305995.1| Threonyl-tRNA synthetase, class IIa [Raphidiopsis brookii D9]
 gi|281197144|gb|EFA72045.1| Threonyl-tRNA synthetase, class IIa [Raphidiopsis brookii D9]
          Length = 332

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 35/98 (35%), Gaps = 1/98 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  +      +   +   + +   GIRA+  L   +     ++  ++   P+  
Sbjct: 230 WLAPVQIRLLPVGEQQIEFTKEIARKMTELGIRAQADLSGDR-LAKLIRNGEKDKIPVMA 288

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           + G  E     L I+  A G+     ++      +  +
Sbjct: 289 VVGAKEVETNSLSIRTRASGELGVIPVEKVVEKMQESI 326


>gi|229014104|ref|ZP_04171225.1| Glycyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229169638|ref|ZP_04297340.1| Glycyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228613834|gb|EEK70957.1| Glycyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228747058|gb|EEL96940.1| Glycyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 458

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 57/238 (23%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +       + +           
Sbjct: 223 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEDELSHYSNATTDIEFRFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|329766897|ref|ZP_08258425.1| glycyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837622|gb|EGF87247.1| glycyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 457

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 3/91 (3%)

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +        K     Q L  A     +    + + G + +  D    P  I       +
Sbjct: 369 VLPLSKKLSDKAVEVYQQL-AADF--MVDFDETGSIGKRYRRQDEVGTPFCITYDFESEN 425

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVA 472
            GM+ ++D    ++    I   + + E ++ 
Sbjct: 426 DGMVTVRDRDTMEQTRIPIAELKQYIEEKIK 456


>gi|324998808|ref|ZP_08119920.1| glycyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 468

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 28/91 (30%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      +     +   G + +  D    P  I      
Sbjct: 377 VLPLSRNADLSPKAKDLAAQLRK-NWNVDFD--DAGAIGRRYRRQDEIGTPFCITVDFDT 433

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +   + I++     +    +   E+W   R
Sbjct: 434 LTDQAVTIRERDSMAQERVALDQVETWLATR 464


>gi|294677983|ref|YP_003578598.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476803|gb|ADE86191.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 648

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/278 (10%), Positives = 71/278 (25%), Gaps = 40/278 (14%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +    ++  +    +    +        G  E    +E   
Sbjct: 392 DDAHIFCMEDQIEAETKKFIEFLSAVYADLGFDKWRIKLSTRPEKRIGTEESWDHAEAAL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
            +   +   +       G  Y     +   +AI         Q                 
Sbjct: 452 ANAVTAAGHEYEIFEGEGAFYGPKLEFVLTDAIGRDWQCGTLQVDPNLPERLDANYIGPD 511

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            ++ +   +           + + ++S             V++ ++  ++D   +     
Sbjct: 512 GAKHRPVMLHRACLGSFERFIGILIESHAGKLPLWLAPRQVVVASITSEADDYVE--EVA 569

Query: 398 QMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
             L  AGIRAE    + K        + G           P     G  E     + ++ 
Sbjct: 570 ATLIAAGIRAECDTRNEKINYKVREHSLGK---------VPYIFAIGAKEVETRTVSVRR 620

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
           L                        T+ +  +V+ +K 
Sbjct: 621 L------------------GDTRTETVALDAIVAALKA 640


>gi|225386498|ref|ZP_03756262.1| hypothetical protein CLOSTASPAR_00245 [Clostridium asparagiforme
           DSM 15981]
 gi|225047417|gb|EEG57663.1| hypothetical protein CLOSTASPAR_00245 [Clostridium asparagiforme
           DSM 15981]
          Length = 499

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 52/187 (27%), Gaps = 18/187 (9%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                F     K   + F       +Y    S      +      +      + L     
Sbjct: 251 GTSHNFGDGFAKAFEIQFTDKDNTLKYVHQTSWGMTTRMIGAIIMVHGDDNGLVL----- 305

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I  +  +++         L K     + L  AG   ++   S K+ G +    + R
Sbjct: 306 -PPRIAPIQIMVVPVQQQKPGVLDKAFELKERLTRAGFSVKVD-DSEKSPGWKFADCEMR 363

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             PL +  G  +  +    +      ++    +   ES              E++ T++ 
Sbjct: 364 GIPLRVEIGPKDMEKNQAVLVRRDNHEKTFISLDELES-----------KAGEMLDTIQN 412

Query: 488 ILQENKE 494
            + E  +
Sbjct: 413 AMYEKAK 419


>gi|146307004|ref|YP_001187469.1| threonyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166225482|sp|A4XTS1|SYT_PSEMY RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145575205|gb|ABP84737.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas
           mendocina ymp]
          Length = 640

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/262 (11%), Positives = 75/262 (28%), Gaps = 13/262 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    ++   +    A   G  EL   +E   
Sbjct: 381 DDAHIFCTEDQVKKEAADFIKLTLQVYADFGFTDIAMKLSTRPAKRVGSEELWDRAEGAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ---KPVVFGSVGGGGRYDGL 337
               N + +        G  Y     +          +                      
Sbjct: 441 ADALNESGLAWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKS-LESSTNNIKEMGPVLITTMDHDSDSLSKYQMY 396
            +R +   +           + + ++    S    +     V++   D  +D   + +  
Sbjct: 501 NNRKRPVMLHRAILGSFERFIGMLIEHYAGSFPAWLAPTQAVIMNITDKQADFAREAEK- 559

Query: 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
              L  +G RA++ L  ++  G +++       P  ++ G  E     + ++     +  
Sbjct: 560 --TLNQSGFRAKVDL-RNEKIGFKIREHTLLKVPYLLVIGDREVETRSVAVR---TRE-- 611

Query: 457 SREIKNNESWREARVAQITIPI 478
             ++ +    + A   Q  +  
Sbjct: 612 GVDLGSMPLEQFAAQLQQAVSR 633



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 9/142 (6%), Positives = 35/142 (24%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  + TP +     L +         + +F+ 
Sbjct: 261 GMVFWHPNGWTVYQVLEQYMRQVQRENGYVEVRTPQVVDR-ILWERSGHWSNYAENMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             ++ +  +++        +   +   +                 +              
Sbjct: 320 ASEN-RDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + ++    AD +
Sbjct: 379 VQDDAHIFCTEDQVKKEAADFI 400


>gi|90579635|ref|ZP_01235444.1| threonyl-tRNA synthetase [Vibrio angustum S14]
 gi|90439209|gb|EAS64391.1| threonyl-tRNA synthetase [Vibrio angustum S14]
          Length = 643

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 19/113 (16%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+         Q   + L+  GIR    L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 VVMNITDAQSEYVQEIVEKLKKCGIRVNADL-RNEKIGFKIREHTLKRVPFMLVCGDKEV 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
             G++ ++        +R+ K+   +           I ELV+ +++ +   K
Sbjct: 603 EAGVVAVR--------TRKGKDLGKF----------KIDELVAFMQEEISSRK 637



 Score = 39.8 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 41/152 (26%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWTIFRELEVFIREKLNEYDYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     +A++   +   +E V
Sbjct: 374 IMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMV 405


>gi|333029668|ref|ZP_08457729.1| glycyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740265|gb|EGJ70747.1| glycyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 512

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 30/107 (28%), Gaps = 8/107 (7%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K +     L       +       + G + +  D    P  I      
Sbjct: 414 VLPLVKKDGLPEKAREIIDDL-KFHFNCQ--YDEKDSIGKRYRRQDAIGTPYCITVDHDS 470

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
                + +++    ++    I +  +    R     + I+ L+  ++
Sbjct: 471 LKDNCVTLRNRDTMEQERVAIADLNNIIADR-----VSITSLLKKLQ 512


>gi|123968494|ref|YP_001009352.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus str. AS9601]
 gi|123198604|gb|ABM70245.1| possible Histidyl-tRNA synthetase [Prochlorococcus marinus str.
           AS9601]
          Length = 383

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 100/325 (30%), Gaps = 38/325 (11%)

Query: 37  YENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVA 96
           Y+ +G++ +      + ++L             V  +       + LR ++T  + +  +
Sbjct: 26  YKLWGYEEVSPS---FINTLQTIKGRGVIDENQVVGIV--SNNSLCLRPEMTTSIVKLSS 80

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
                   P R +  G VF  +++    F+   +          +T   E+ ++      
Sbjct: 81  TRLINKKRPIRLFTNGMVFDKKQNNKNSFKLQEKLQSGIELIGYDTKYPEIEVINI---- 136

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
                             L   ++ I L     L   +   + +D +           + 
Sbjct: 137 ------------------LFDSIDNINLKDGCNLFLLVSTTKIMDLILNKYKNNNFEEIK 178

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
           +   +   D      +  +   I+   L    E     + + +K      K  ++L  + 
Sbjct: 179 KSLVNFDQDNLSKLGIDEDDKYILKDLLFTRGEPI--AILKKLKTIYGTSKTLDDLNFLF 236

Query: 277 ELV-RKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
           E + + S     ++++  T    L  Y G V++ I                 +  GGRYD
Sbjct: 237 ETLSKISNKYGVKLQLDPTFQPHLNLYEGIVFQLI--------GDNGKNKSVIAKGGRYD 288

Query: 336 GLVSRFKGQNVPATGFSIGISRLIV 360
            LV  F        G    IS  I+
Sbjct: 289 ELVRSFSPNEKIFNGIGFTISVDIL 313


>gi|41615004|ref|NP_963502.1| prolyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|74580044|sp|Q74ND5|SYP_NANEQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|40068728|gb|AAR39063.1| NEQ210 [Nanoarchaeum equitans Kin4-M]
          Length = 537

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 56/501 (11%), Positives = 135/501 (26%), Gaps = 64/501 (12%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +    ++  + N  E+ G +P   P++       K         + V
Sbjct: 27  PVKGMPVYKPYGYKAFKFLMSLLENKLESIGAEPAWFPIVIPYSIFKKESEHIKGFEEEV 86

Query: 71  FSLQ----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           F ++    D     + LR                        Y +   +  E +      
Sbjct: 87  FWIERAGNDKLEDPLILRP-----------------TSETEMYYMFAKWI-ESYRDLPLI 128

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
            ++   V    + +  A      ++ +   +V     D    +   K +   +       
Sbjct: 129 IYMTNTVYRYETKSTKALIRGREVLWNETHSVHRSEEDAREHMAKAKEVYDYI------- 181

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
                         D L    +  V+    +        +   A +   +   + +   +
Sbjct: 182 ------------FWDVLYLPYIW-VRRPEWDKFPGGEETYAADAIMPDGRFLQVGTIHLL 228

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             + ++    + +      +K  +     +  ++    N  ++         LE      
Sbjct: 229 GQKFAIPFEIKFLDYHPFYKKYGD----PNIYIKDKNGNEYKVHAPKEFWEELEKGKLTK 284

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
              I     + +K+  +           +    ++  Q             L      L 
Sbjct: 285 TYTI----KIGDKEYTISSIEEINEKLKEYDFRKYVWQTSYGISMRAFGGALYWLGDDLG 340

Query: 367 S-STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 I  +  V+I  +  D   + +Y      L     R  +    +K  G +  Y D
Sbjct: 341 LVMPYKIAPIQIVIIPILGKDDTKVIEYSKKVYELIKDKYRVYLDSDDTKTPGYKYYYYD 400

Query: 426 RRNCPLAIIQGTGERSRGMLQI--KD-----------LAKGKELSREIKNNESWREARVA 472
               PL I  G  E     + I  +D           L K  ++ +E++ +   +     
Sbjct: 401 LIGVPLRIDIGLKEVENNSITIVRRDNKKKYTISLNELEKIDQIFKEMEEDLKQKAKSFV 460

Query: 473 QITIPISELVSTVKKILQENK 493
              +   +    +K+ +++NK
Sbjct: 461 NDMVVRVKTFDELKEAIEQNK 481


>gi|330445795|ref|ZP_08309447.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489986|dbj|GAA03944.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 643

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 19/113 (16%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+         Q   + L+  GIR    L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 VVMNITDAQSEYVQEIVEKLKKCGIRVNADL-RNEKIGFKIREHTLKRVPFMLVCGDKEV 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
             G++ ++        +R+ K+   +           I ELV+ +++ +   K
Sbjct: 603 EAGVVAVR--------TRKGKDLGKF----------KIDELVAFMQEEISSRK 637



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 41/152 (26%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R     Y +  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWTIFRELEVFVREKLNEYDYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     +A++   +   +E V
Sbjct: 374 IMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMV 405


>gi|322707106|gb|EFY98685.1| glycyl-tRNA synthetase 1 [Metarhizium anisopliae ARSEF 23]
          Length = 662

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 2/122 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            S         VLI  + ++       +  +Q LR AGI + +   SS + G +    D 
Sbjct: 533 LSFPPTVAPTKVLIVPLSNNVQFRPIIKKLSQQLRLAGISSRID-DSSASIGKRYSRNDE 591

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              PL I           + ++D     ++  E        +A V        ++ S + 
Sbjct: 592 LGTPLGITVDFQTLQDDTITLRDRDSTAQVRAEESKILDAIKALVDGSK-NWEKVASELP 650

Query: 487 KI 488
           K 
Sbjct: 651 KF 652


>gi|195331460|ref|XP_002032419.1| GM23523 [Drosophila sechellia]
 gi|194121362|gb|EDW43405.1| GM23523 [Drosophila sechellia]
          Length = 1094

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 51/159 (32%), Gaps = 22/159 (13%)

Query: 348  ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTA 403
                      ++V   +              ++           D  ++     + L   
Sbjct: 854  GLTTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTKDDERAQLLDACKALEKR 913

Query: 404  ----GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSR 458
                G+R E     + + G +  + + +  PL +  G  +      + ++    G++++ 
Sbjct: 914  LVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDLKAQQLVAVR-RDTGEKITI 972

Query: 459  EIKNNESWREARVAQITIPISELVSTVKK-ILQENKEEI 496
             + + E             I  L+ T+ + +L + +E++
Sbjct: 973  PLADVEK-----------KIPALLETIHESMLNKAQEDM 1000


>gi|317508518|ref|ZP_07966185.1| prolyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316253209|gb|EFV12612.1| prolyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 606

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL---EYSDSLGKFLPDEDRPNKGV 70
           G        ++   +I + +R   +  G   I  P L   +  ++  ++    D     +
Sbjct: 40  GVFAWLPLGLKALRQIENVVREEMDGIGGQEILLPALAPRQPYETSNRWTEYGDN----L 95

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G    L  
Sbjct: 96  FRLKDRKGGDYLLAP 110



 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 32/97 (32%), Gaps = 1/97 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          V + +    S      + Y   L   G+R  +      + G +  
Sbjct: 477 DEKGLRWPPQVAPFQVHVLSTGKGSAEAEAAEQYAAELEAHGLRVLLD-DRKASPGVKFA 535

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            A+    P+ ++ G    S G +++K+   G+  S +
Sbjct: 536 DAELLGAPVIVVVGRDWASEGKVELKERFAGESGSVD 572


>gi|225021787|ref|ZP_03710979.1| hypothetical protein CORMATOL_01815 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945483|gb|EEG26692.1| hypothetical protein CORMATOL_01815 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 466

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/261 (11%), Positives = 60/261 (22%), Gaps = 35/261 (13%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS--STIVRG 298
            +F+    E    E+   V  + A EK    +    +     G N + ++        R 
Sbjct: 206 GNFIFRTREFEQMEIEYFVSPSDAPEKFQEWVDACWDWFIDLGINPDNMRQFDVPKEERA 265

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVV---------------------FGSVGGGGRYDGL 337
                   +E   GF      +   V                     F  V G      +
Sbjct: 266 HYSAGTIDFEYRFGFAGSEWGELMGVANRTDYDLGSHIKYSGEDLSYFDQVTGERYVPYV 325

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLE-------SSTNNIKEMGPVLITTMDHDSDSL 390
           +    G       F         A  +            +       V +  +      L
Sbjct: 326 IEPSFGLTRAMMAFLCDAYHEDEAPNAKGGVDKRTVLRLDRRLAPVKVAVLPLSKKDTLL 385

Query: 391 SKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
              +     LR    I        +   G + +  D    P  +           + +++
Sbjct: 386 PTAEAIAADLRKLWNI----DYDIAGAIGRRYRRQDEIGTPFCVTVDFDSLEDRSVTVRE 441

Query: 450 LAKGKELSREIKNNESWREAR 470
                +    I    ++  AR
Sbjct: 442 RDTMAQERVAIDELPAYLGAR 462


>gi|207723063|ref|YP_002253475.1| threonyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206588254|emb|CAQ18812.1| threonyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 344

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 9/83 (10%), Positives = 27/83 (32%), Gaps = 2/83 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  +I   +   +R      G+  + TP +    +L +         + +F +
Sbjct: 261 GMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDR-TLWEHSGHWQNYKENMF-V 318

Query: 74  QDDDGQWISLRYDLTAPLARYVA 96
            + + +  +++        +   
Sbjct: 319 TESEKREYAIKPMNCPGHVQIFI 341


>gi|323483766|ref|ZP_08089146.1| hypothetical protein HMPREF9474_00895 [Clostridium symbiosum
           WAL-14163]
 gi|323402957|gb|EGA95275.1| hypothetical protein HMPREF9474_00895 [Clostridium symbiosum
           WAL-14163]
          Length = 462

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 54/220 (24%), Gaps = 24/220 (10%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV-------- 324
                 ++  G     ++        L +Y+    +    FP    +   +         
Sbjct: 244 EYCINWLKALGIKEVEMRARDHEQEELSFYSKATTDIEFLFPFGWGELWGIADRTDYDLT 303

Query: 325 -----FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS--------TNN 371
                 G        +  +        P+ G        + A    E           + 
Sbjct: 304 QHQNTSGQDMTYFDDEKKIKYIPYVIEPSLGADRVTLAFLCAAYDEEEIGEGDVRTVLHF 363

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV I  +          +     L       E       N G + +  D    P 
Sbjct: 364 HPAIAPVKIGVLPLSKKLNEGAEKVYNELCKY-YNCEFD--DRGNIGKRYRRQDEIGTPF 420

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            I       + G + ++D    +++   I   +++ E + 
Sbjct: 421 CITYDFDSETDGAVTVRDRDTMEQVRVPITELKAYFEDKF 460


>gi|229163896|ref|ZP_04291836.1| Glycyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619517|gb|EEK76403.1| Glycyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 458

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 223 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMHEESMRLRDHGEEELSHYSNATTDIEFKFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|161831126|ref|YP_001597175.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|161762993|gb|ABX78635.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 660

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 41/365 (11%), Positives = 98/365 (26%), Gaps = 7/365 (1%)

Query: 114 VFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
             R           + +     +  ++    +       D + ++ ++   Y I   +  
Sbjct: 284 QMREYIRQITHKYGYQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEPQQYVIKPMSCP 343

Query: 174 ILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
               I  +      D                   L G+ + L     D++  F     + 
Sbjct: 344 AHVQIFNQGVKSYRDLPLRYAEFGACHRNEPSGTLHGL-MRLRGFVQDDAHIFCTEDQIQ 402

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
           SE    +     +  +    E+   +        G +E+   +E       N   ++   
Sbjct: 403 SEVSAFIDQLHEVYADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDI 462

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATG 350
               G  Y     +        + +              G        S+     +    
Sbjct: 463 LPGEGAFYGPKIEFSLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAI 522

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  L + L+           + PV +  M+             + L+  GIRA   
Sbjct: 523 LGSFERFLGILLEESAGKLPLW--LAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSD 580

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           L  ++  G +++       P  ++ G  E +   L ++ L      +  ++      +A 
Sbjct: 581 L-RNEKIGFKIREHTIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAE 639

Query: 471 VAQIT 475
           ++Q +
Sbjct: 640 ISQRS 644



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            + E P G          I  ++ + IR I   YG+  + TP L  + SL       ++ 
Sbjct: 264 FQPESP-GNVFWHPNGWSIILQMREYIRQITHKYGYQEVHTPQLIDA-SLWDKSGHLEKF 321

Query: 67  NKGVFSL 73
              +FSL
Sbjct: 322 GDDIFSL 328


>gi|119716172|ref|YP_923137.1| glycyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119536833|gb|ABL81450.1| glycyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 471

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 2/93 (2%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  ++D   K +     LR AG   +     +   G + +  D    P  +    
Sbjct: 377 VAVLPLSRNADLSPKAKDLAMELRRAGWHVDFDDSGA--IGRRYRRQDEIGTPYCVTVDF 434

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    ++    +    ++   R
Sbjct: 435 ETLDDQAVTVRERDSMQQERIGLDRISAYFAER 467


>gi|326675882|ref|XP_002665325.2| PREDICTED: probable threonyl-tRNA synthetase 2, cytoplasmic,
           partial [Danio rerio]
          Length = 464

 Score = 46.0 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 39/116 (33%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G     + + V      +G    ++A+ +   +      + P  +  +  +      
Sbjct: 315 TYVGKDGDDRDRPVIIHRAILGSVERMIAILTENYAGKWPLWLSPRQVMLVPVNPSLEEY 374

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +   +    AG  A+  L SS     +++ A        ++ G  ER    + ++
Sbjct: 375 AKQVCKRFVEAGFMADADLDSSCLLNKKIRNAQLAQYNFILVVGEKERLSNSVNVR 430



 Score = 37.1 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y   GF  + TP + Y+  L +         + +     + 
Sbjct: 153 FLPRGAFIYNTLMDFIRGEYSRRGFQEVATPNI-YNSRLWETSGHWQLYTQSIL----ES 207

Query: 78  GQWISLRYDL 87
           GQ +S+  ++
Sbjct: 208 GQKLSIGSEM 217


>gi|269102906|ref|ZP_06155603.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162804|gb|EEZ41300.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 643

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 37/100 (37%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+         Q   + L+  GIR    L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 VVMNITDSQSEYVQEIVEKLKKCGIRVNADL-RNEKIGFKIREHTLKRVPYMLVCGDQEV 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          +I +  ++ +  ++   + I E
Sbjct: 603 EAGEVAVRTRKGKDLGKFKIDDLVAYMQQEISSRKLNIVE 642



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 41/152 (26%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R     Y +  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWTIFRELEVFVREKLNQYDYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   +   +E V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQVQQEVTSCIEMV 405


>gi|324500217|gb|ADY40110.1| Bifunctional aminoacyl-tRNA synthetase [Ascaris suum]
          Length = 1924

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 48/360 (13%), Positives = 100/360 (27%), Gaps = 30/360 (8%)

Query: 132  DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
              D  G       +              IK+           +  G LEK   H  D   
Sbjct: 1451 YYDVSGCYVLRPWSFAIWETIKKWFDKEIKKLGVRNCYFPMFVSQGALEKEKTHIADFAP 1510

Query: 192  ERLIVLRAIDKLDKFGL------QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
            E   V RA +      +      + V          +  D     N     +       +
Sbjct: 1511 EVAWVTRAGNSEMSEPIAIRPTSETVMYPSYAKWIKSHRDLPLRLNQWCNVVRWEFKHPT 1570

Query: 246  IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
              L        E        E+   E+  I +L  K   +   I +        E + G 
Sbjct: 1571 PFLRTREFLWQEGHTAFQTAEEAHQEVFQILDLYAKVYTDLLAIPVVKGRKSEKEKFAGG 1630

Query: 306  VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
             +   +   V    +      S   G  +  +           +   +  +   +  +++
Sbjct: 1631 DFTTTVEAYVPVNGRAIQGATSHHLGQNFSKMFDISFEDPNTGSKAYVYQNSWGLTTRTI 1690

Query: 366  ESSTNNI---------KEMGPVLITTMDHDSDS----------LSKYQMYTQMLR-TAGI 405
             +                + P+ +  +     +          +SK +    ML   A I
Sbjct: 1691 GAMVMIHGDDFGLVLPPRVAPIQVIVVPVGITAQTSEEQRVSLISKAKEIASMLLTEADI 1750

Query: 406  RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ--IKDLAKGKELSREIKNN 463
            RAE  L  + + G +  + +++  P+ +  G  + +   +   I+    GK+++  + N 
Sbjct: 1751 RAEADLRDNYSPGWKFNHWEQKGVPIRMEVGPKDVANSQVTCVIRH--SGKKVAVPMANL 1808


>gi|289450135|ref|YP_003475729.1| glycine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184682|gb|ADC91107.1| glycine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 462

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 11/100 (11%), Positives = 31/100 (31%), Gaps = 3/100 (3%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV I  +   +      +   +ML   G   E+        G + +  D    P 
Sbjct: 364 HPALAPVKIAVLPLSAKLTEAARPLYEMLSKIG-NCELDDRQG--IGKRYRRQDEIGTPY 420

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
            +       +   + +++    +++   I    ++   + 
Sbjct: 421 CVTYDFDSVNDNCVTVRERDSMEQVRLPIAELTAYFADKF 460


>gi|307565532|ref|ZP_07628012.1| proline--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345691|gb|EFN91048.1| proline--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 493

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 71/257 (27%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        ++   E    L V ++   K         + S   R          EA+
Sbjct: 173 WQEGHTAHATKQEAEEEAKLMLKVYADFAEKWLAVPVIQGVKSETERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           +++               +RLI AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKSFDVTFLNKENKPEYVWATSWGVSTRLIGALIMTHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L     K Q     LR AG+  +     +K  G   
Sbjct: 293 GLVLPPKIAPIQVVIIPIFKGEEQLEQLKNKLQPVIDELREAGVTVKFDDSDNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+AD   +  P+ +  G  +     +++                   R   + + ++   
Sbjct: 351 KFADYELKGVPVRLAMGGRDLENNTIEV------------------MRRDTLEKESVSFD 392

Query: 480 ELVSTVKKILQENKEEI 496
            +   +K +L E ++ I
Sbjct: 393 GITDYIKHLLDEIQDNI 409


>gi|254498720|ref|ZP_05111436.1| threonyl tRNA synthase [Legionella drancourtii LLAP12]
 gi|254352048|gb|EET10867.1| threonyl tRNA synthase [Legionella drancourtii LLAP12]
          Length = 648

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 43/152 (28%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +R    ++G+  I+TP L     L +           +F +
Sbjct: 270 GMVFWHPKGWTIYQELERYMRARLADFGYQEIKTPQLVDK-VLWEKSGHWANFRDEMF-V 327

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + D +  +++        +   +   +       +         +            ++
Sbjct: 328 TETDNRHYAVKPMNCPCHIQVYNQGLKSYRDLPLRFSEFGNCHRCEPSGSLHGLMRVRNM 387

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +     + ++   +   L+ V     D+
Sbjct: 388 VQDDAHIFCTEDQIQSEVDMMLQLVQSVYTDF 419



 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +          Q  TQ+L+  G+RA   L  ++  G +++    +  P  +
Sbjct: 544 WLSPVQAAVLTISEKQNDYAQQVTQILQKRGLRANFDL-RNEKIGFKIREHTLQKVPYLL 602

Query: 434 IQGTGERSRGMLQIKDLA 451
           + G  E   G + ++   
Sbjct: 603 VIGDKEVESGQVAVRSRE 620


>gi|269127431|ref|YP_003300801.1| glycyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268312389|gb|ACY98763.1| glycyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 462

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      E     +   G + +  D    P  I      
Sbjct: 371 VLPLSRNADLSPKARDLAARLRKH-WNVEFD--DAGAIGRRYRRQDEIGTPFCITVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++    K+    I   ES+  A+
Sbjct: 428 LEDDAVTVRERDSMKQERIAISQVESFLAAQ 458


>gi|224130834|ref|XP_002320936.1| predicted protein [Populus trichocarpa]
 gi|222861709|gb|EEE99251.1| predicted protein [Populus trichocarpa]
          Length = 508

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 75/256 (29%), Gaps = 23/256 (8%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             E        ++   E++ I EL R+       I I       +E + G +Y   +   
Sbjct: 169 WQEGHTAFATKQEADEEVLQILELYRRIYEEFLAIPIIKGKKSEMEKFAGGLYTTSVEAF 228

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSR----------FKGQNVPATGFSIGISRLIVALKS 364
           + N  +      S   G  +  +                QN  A         ++V    
Sbjct: 229 IPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDD 288

Query: 365 LESSTNNIKEMGPVLITTMDHDSDS----LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                        V++  +     +              L  AGIRAE     + + G +
Sbjct: 289 KGLVLPPKVSSVQVIVVPVPFKDANTQGIFDACAATVDTLCEAGIRAEADYRENYSPGWK 348

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             + + +  PL I  G  + +     I  L              + R    A++ I    
Sbjct: 349 YSHWEMKGVPLRIEIGPKDLANNQASIPSLH---------FTVRAVRRDNAAKVDISCDN 399

Query: 481 LVSTVKKILQENKEEI 496
           L   VK +L + ++ +
Sbjct: 400 LAEKVKDMLDDIQKSM 415


>gi|168064726|ref|XP_001784310.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664141|gb|EDQ50872.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 685

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 25/93 (26%), Gaps = 2/93 (2%)

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R+   L    +            I                   +  AG   E  + + +
Sbjct: 568 ERMFAILLEHYAGKWPFWLSPRQCI-VCPVSEKFTHYAVEVRDAINAAGYFCEADV-TDR 625

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +++ A        ++ G  E S+  + I+
Sbjct: 626 KLQKKIREAQLAQFNYILVVGEEETSKKQVNIR 658



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N++   IR+ Y   G++ + +P +     L +           +F+ + + 
Sbjct: 315 FLPHGARIYNKLQAFIRDEYRKRGYEEVVSPNMFNMQ-LWETSGHAANYKDNMFTFEVEK 373

Query: 78  GQWISLRYDLTAP 90
            Q   L+      
Sbjct: 374 -QEFGLKPMNCPG 385


>gi|154492734|ref|ZP_02032360.1| hypothetical protein PARMER_02371 [Parabacteroides merdae ATCC
           43184]
 gi|154087039|gb|EDN86084.1| hypothetical protein PARMER_02371 [Parabacteroides merdae ATCC
           43184]
          Length = 493

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/246 (11%), Positives = 65/246 (26%), Gaps = 24/246 (9%)

Query: 255 LYELVKGTIAGEKGFNELVVIS----ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E   +     +             + S   R          EA+
Sbjct: 173 WQEGHTAHATREEAEIEAKKMQGVYADFAENYMAMPVIKGVKSASERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G   G       + +    +          +RLI AL        
Sbjct: 233 MQDGKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYAWATSWGVSTRLIGALIMSHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L++           L+  GI  +     +K  G + 
Sbjct: 293 GLVLPPHLAPIQVVIIPIYRSEEQLAQISEKVNGIVAKLKALGISVKFDNADNKKPGWKF 352

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + +  P+ +  G  +     +++      ++ +    N E++ +            L
Sbjct: 353 AEYELKGVPVRLAMGGRDLENNTIEVMRRDTLEKETVTCDNIETYVQ-----------NL 401

Query: 482 VSTVKK 487
           +  ++K
Sbjct: 402 LEEIQK 407


>gi|90410627|ref|ZP_01218643.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90328868|gb|EAS45152.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 195

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 19/113 (16%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+         Q   + L+  GIR    L  ++  G +++    +  P  ++ G  E 
Sbjct: 96  VVMNITDSQSEYAQEIVKKLQKCGIRVNADL-RNEKIGFKIREHTLKRVPYMLVCGDKEV 154

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
             G + ++        +R+ K+             + I ELV+ +++ +   K
Sbjct: 155 EAGEIAVR--------TRKGKDLG----------KLKIDELVAFLQQEISSRK 189


>gi|119872334|ref|YP_930341.1| prolyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|152112945|sp|A1RSR6|SYP_PYRIL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|119673742|gb|ABL87998.1| prolyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 488

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        +++R  + + IR I++  G + +  P+    +   K         K V
Sbjct: 38  PVKGAYVWRPYGMKLRRNVENLIRRIHDETGHEEVLFPVFIPYEFFSKESQHIRGFEKEV 97

Query: 71  F--SLQDDDGQWISLRY 85
           F  S   + G+ + LR 
Sbjct: 98  FWVSKGGEGGERLILRP 114



 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 80/254 (31%), Gaps = 33/254 (12%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
           + E+    +         +    I E V       + + ++  I +   +      E  +
Sbjct: 158 LREISMFKEAHTVHATREDAERQIREAVEIYKRIFDEMCLAYMINKRPNWDKFAGAEYTI 217

Query: 312 GFPVMNEKQKPVVFGSVGGGG---------RYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
            F  +    + +  G+V   G          Y  +    K  +  + G S      ++  
Sbjct: 218 AFDTILPDGRTLQIGTVHYLGVNFTKVFEVTYLDIDGTRKLAHTTSYGISERSIAAMLIT 277

Query: 363 KSLESSTNNIKEMGPVLITTMD--HDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKN 416
              +  T    ++ P+ +  +   +  + +           +MLR  GIR  +     K 
Sbjct: 278 HGDDGGTTLPPKLAPIQVVIVPIFYGEEEMPTVMKFVDEVYRMLRDVGIRIHIDDRRDKT 337

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            G +  Y + +  PL I  G  +  +  + +                   R   + +  +
Sbjct: 338 PGWKFYYWELKGVPLRIEVGRRDIEKRQVVV------------------TRRDTLEKYAV 379

Query: 477 PISELVSTVKKILQ 490
            + ELV  VK+++ 
Sbjct: 380 SLGELVDAVKQLMS 393


>gi|167957340|ref|ZP_02544414.1| glycyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 473

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           + + K +     L  A     +    + N G + +  D    P  ++        G + +
Sbjct: 398 ELVEKAREVYAQLAKAN-PGRVMWDDNGNIGKRYRRQDEIGTPHCVVVDFQTLEDGTVTV 456

Query: 448 KDLAKGKELSREIKNN 463
           ++    ++   +++  
Sbjct: 457 RERDTTEQRRVKVEEL 472


>gi|157835845|pdb|2Q7E|A Chain A, The Structure Of Pyrrolysyl-Trna Synthetase Bound To An
           Atp Analogue
 gi|157835848|pdb|2Q7G|A Chain A, Pyrrolysine Trna Synthetase Bound To A Pyrrolysine
           Analogue (Cyc) And Atp
 gi|157835849|pdb|2Q7H|A Chain A, Pyrrolysyl-Trna Synthetase Bound To Adenylated Pyrrolysine
           And Pyrophosphate
 gi|169404687|pdb|2ZIM|A Chain A, Pyrrolysyl-Trna Synthetase Bound To Adenylated Pyrrolysine
           And Pyrophosphate
          Length = 291

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 7/133 (5%)

Query: 28  RILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED-RPNKGVFSLQDDDGQWISLRYD 86
           ++   I   + + GF  I++P+L   + + +   D D   +K +F + D +     LR  
Sbjct: 82  KLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV-DKN---FCLRPM 137

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
           L   L  Y+ +    +  P + + IGP +R E  G     +F    ++     +      
Sbjct: 138 LAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTM--LNFCQMGSGCTREN 195

Query: 147 MCMMMADTLEAVG 159
           +  ++ D L  +G
Sbjct: 196 LESIITDFLNHLG 208


>gi|296394216|ref|YP_003659100.1| threonyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181363|gb|ADG98269.1| threonyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 683

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 39/125 (31%), Gaps = 5/125 (4%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y G     +   +        I R I  L    +    +  + PV +  +    D +  
Sbjct: 530 EYTGPSGHKERPVMIHRALFGSIERFIGVLVEHYAGAFPMW-LAPVQVMGIPVSEDHVPH 588

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY-ADRRNCPLAIIQGTGERSRGMLQIKDLA 451
            + +   LR  G+RA +     +       + A +   P  ++ G  +     +  +   
Sbjct: 589 LREFVDSLRAGGVRAHIDSSDDRMQKKIFTHTAQK--IPFLVLAGGRDVEAQTVSFR-FR 645

Query: 452 KGKEL 456
            G + 
Sbjct: 646 DGSQR 650


>gi|260949659|ref|XP_002619126.1| hypothetical protein CLUG_00285 [Clavispora lusitaniae ATCC 42720]
 gi|238846698|gb|EEQ36162.1| hypothetical protein CLUG_00285 [Clavispora lusitaniae ATCC 42720]
          Length = 565

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 69/523 (13%), Positives = 136/523 (26%), Gaps = 56/523 (10%)

Query: 10  ELPR-GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
             P+ G        + + N++   +    ++ G + I    L +SD L K          
Sbjct: 44  SPPKPGLVHWMPMGMLVLNKMKQLVHKHMQDAGAEEISLSALSHSD-LWKQTGRWG--GA 100

Query: 69  GVFSLQDDDGQWISLRY----DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP-- 122
            +F L+D  G    L      ++T      V +N  +       +        ++  P  
Sbjct: 101 ELFRLKDSKGAEYCLAPTCEEEVT----HLVQQNVASYKNLPLLFYQINTKFRDEKRPRS 156

Query: 123 -----GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
                  F        D   + A  A   M    A    A+                   
Sbjct: 157 GLLRGREFVMKDAYSFDVSEAEAMRAYETMSRAYAGVFAALRAPCVRADADTGEIGGSMS 216

Query: 178 I-LEKIGLHGDDKLNERLIVLRAIDKLDKFGL------QGVKLLLGE-----GRTDNSGD 225
                +   G+D L E     R  +             +  K  L          D S  
Sbjct: 217 HEWHYVHAAGEDTLFECTDCGRTSNVEMTPSFPAEDAAEPSKTSLEAAVAYFPTIDRSTL 276

Query: 226 FTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYN 285
                 ++       +     D++ S     E V      E    +  V+  +  +    
Sbjct: 277 VCAYYPVSRAFRPAFLRETVPDIDLSGTLSEEEVLALFRDEATIIDKRVVRIMDSRLDSR 336

Query: 286 SNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF----------GSVGGGGRYD 335
           SN               T      +                          +   G RY 
Sbjct: 337 SNLPDFPVKFANRSLVSTLTDVPLVEAEEGELCAHCDSGTLRSSRAIEVAHTFYLGDRYT 396

Query: 336 GLVSRFKGQNVP----------ATGFSIGISRLIVALKSLESSTNNIKEMGPV-LITTMD 384
             +                      + IGISR+I AL  +   ++ ++    +       
Sbjct: 397 RALDCTVEVPGADGTVSRQPVLMGCYGIGISRIIAALAEINRDSHGLRWPAAIAPWHVTV 456

Query: 385 HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM 444
            D+ +  +     + L    +R  +    S   G +++ +     PL ++ G        
Sbjct: 457 VDAGAQEQAHEVARSLGDMEVR--LDARPSVRLGRKIRESHAMGIPLVLVVGKR-YPTVE 513

Query: 445 LQIKDLAKG-KELSREIKNNESWREARVAQITIPISELVSTVK 486
           ++++    G    +   +++  W     A  T  I +  +  K
Sbjct: 514 IEVRGRQHGRSWETVRQESSFDWIVETGASHTKHIVDCANAPK 556


>gi|45185919|ref|NP_983635.1| ACR233Wp [Ashbya gossypii ATCC 10895]
 gi|44981709|gb|AAS51459.1| ACR233Wp [Ashbya gossypii ATCC 10895]
          Length = 562

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 57/505 (11%), Positives = 135/505 (26%), Gaps = 60/505 (11%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R    + + +R   +  G   ++   L   ++L +     +  NK +F L+D  
Sbjct: 52  WLPLGLRCLRNVENIVRKRMDECGGQELQLSTLSP-ETLWQRTGRWE--NKELFKLRDAK 108

Query: 78  GQWISLRY----DLT-------------APLARYVAENF-DTIVFPCRTYRIGPVFRNEK 119
           G+   L      D+T               L   +   + D +       R       + 
Sbjct: 109 GRNYCLSATCEEDVTWLMSECLESYKDLPSLVYQIGTKYRDELRPRGGLLRSREFLMKDA 168

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINN-RKILDGI 178
           +      Q        +    +    ++ +         G    +     +   +  + +
Sbjct: 169 YSFHADSQDAMQMFHKMKQVYDQIFTDLKVPFKSAAADCGSIGGELSREYHYIHEKGEDV 228

Query: 179 LEKIGLHGDDKLNERLIVLRAIDKLDK------FGLQGVKLLLGEGRTDNSGDFTKGANL 232
           L            E    +              + L  V   L       +        L
Sbjct: 229 LYSCNSCRQVSNVEMCASIPTEPGQHTGAVAVAYALNQVHDTLLCLYYPANRTLNWNLAL 288

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKG---TIAGEKGFNELVVISELVRKSGYNSNRI 289
           +    DI ++  ++  ++ +    E       +       + L   S+          + 
Sbjct: 289 SVMDNDIDMTLANVGNDRVLELFLEQNTDPMFSSVVRVMDSRLNSRSQFPDFPLQTYLKS 348

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL------VSRFKG 343
             S      L + T        G   ++ +    V      G  Y         +   + 
Sbjct: 349 NFSQLSGHSLVHATQGELCGDCGKGTLDARNSIEVGHCFYLGRTYSEALGAAVRMRTNET 408

Query: 344 QNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
             +    + IGISRL+ A+      S      +      V +     D +  +   + + 
Sbjct: 409 TTLEMGCYGIGISRLVGAIADVTRDSQGLCWPSCVAPYKVSLNYAGEDENVRTVRSLLS- 467

Query: 399 MLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
                     +    S    + G  L+ + +   PL++I G        ++++    G+ 
Sbjct: 468 ----------LEPYESPAGTSLGASLQLSQQLGIPLSVIVGKKSWPHVEIEVR----GRR 513

Query: 456 LSREIKNNESWREARVAQITIPISE 480
            S   ++             +P ++
Sbjct: 514 FSDTWRDEHRKLHEHYGWRAVPAAD 538


>gi|126174365|ref|YP_001050514.1| threonyl-tRNA synthetase [Shewanella baltica OS155]
 gi|153000743|ref|YP_001366424.1| threonyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217973356|ref|YP_002358107.1| threonyl-tRNA synthetase [Shewanella baltica OS223]
 gi|166225497|sp|A3D4I2|SYT_SHEB5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225498|sp|A6WNH2|SYT_SHEB8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783536|sp|B8EES6|SYT_SHEB2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|125997570|gb|ABN61645.1| threonyl-tRNA synthetase [Shewanella baltica OS155]
 gi|151365361|gb|ABS08361.1| threonyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217498491|gb|ACK46684.1| threonyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 642

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/205 (8%), Positives = 57/205 (27%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+    + +  +++        +   +   +                 +       
Sbjct: 314 SEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     D+++   ++  +                    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTDSQVQEEVSACI--------QMVYDTYATFGFENIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++ +  +  RA + L +      
Sbjct: 425 EKRIGDDAMWDRAEEALKQALRDNN 449



 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  M+         +   +  +  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E     + ++       +       E +      QI++   +L+  
Sbjct: 595 VVGDQEMENKEVAVR---TRDGIDLGKMRLEDFATKIHQQISLRSLKLLEE 642


>gi|307609489|emb|CBW98986.1| prolyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 569

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 49/162 (30%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R          +  P ++ ++ L +     +  
Sbjct: 31  MIRKLGSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAE-LWQETGRWETF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              + +++D + +         ++   + R   +++  +          +R     R   
Sbjct: 90  GGQLLTMKDSNQREYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F             S +    +M        + +G+K
Sbjct: 150 MRAREFIMKDAYSFHLSLESLQETYKDMYQAYCRIFDRMGLK 191


>gi|153803259|ref|ZP_01957845.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124121199|gb|EAY39942.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 516

 Score = 46.0 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++             Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 418 VVVNITDKQADYAHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 476

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  +  +A +A   + + E
Sbjct: 477 EAGEIAVRTRKGKDLGKFKLDDFIAHIQAEIASRKLNLEE 516



 Score = 40.2 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 14/167 (8%), Positives = 44/167 (26%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR+    YG+  ++ PL+     L +     D+ 
Sbjct: 131 MQQEAP-GMVFWHHNGWSVFRDLEIFIRHKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 188

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 189 ADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 247

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V      +       K
Sbjct: 248 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK 294


>gi|332292776|ref|YP_004431385.1| prolyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170862|gb|AEE20117.1| prolyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 492

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 67/264 (25%), Gaps = 33/264 (12%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E +         + E       +           + +   R    
Sbjct: 168 EFLWQEGHTAHATKQEALVEAELMNNIYAEFAENFLAI------PVVKGVKTESERFAGA 221

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G            +    Q           +RL+ A
Sbjct: 222 DETFCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFTTNQGKQEHVWATSWGVSTRLMGA 281

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +    + L           Q L+  G+  +    
Sbjct: 282 LIMTHSDDQGLVLPPNLAPFQVVIVPIYKGQEQLDAISQVANEIVQDLKLHGVSVKFDNR 341

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +   G +    + +  PL I  G  +  +  +++                   R   + 
Sbjct: 342 DTHKPGWKFNEYELKGVPLRIGIGPKDLEKRTVEL------------------ARRDTLT 383

Query: 473 QITIPISELVSTVKKILQENKEEI 496
           +  +    +V TV  +L+E +E +
Sbjct: 384 KEFVAKENIVETVVDLLKEIQENL 407


>gi|296436840|gb|ADH19010.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 581

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN- 67
            +  +G         R+  ++ + IR      G   +  PLL+ ++   K    +   + 
Sbjct: 33  FKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKAFLSE 92

Query: 68  KGVFSLQDDDGQWISLRY 85
           K ++ L+D + + + L  
Sbjct: 93  KLLYVLKDRENKAMCLAP 110



 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 86/298 (28%), Gaps = 23/298 (7%)

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            +K  +                ++     +D  +    + +   L   +      +    
Sbjct: 286 CQKDSEKFFAICIRGDRQINLTKVASFLQVDDCELASEEEILKHLHVEKGFIGPLYCPIP 345

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHE-LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
               E    M +F+  + +K +H       +       G   L    +L  ++G     I
Sbjct: 346 CYADETTRPMTNFICANNQKDVHCKHVNWGRDIPLPAFGDFLLAEAGDLCPQNGGAPYEI 405

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                +       T       +GF   N  ++    G+ G G                  
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIG------------------ 447

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE- 408
                 + +     +             + I     D++  +      Q L T G   E 
Sbjct: 448 VGRTLAACIEQLADNKGLVWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGF--EP 505

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +    ++  G +LK +D    P  +I G   +S G+L+I+    G++ +   +N   W
Sbjct: 506 LLNDRNERLGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIES-RSGEKCNVSPENLLDW 562


>gi|296435914|gb|ADH18088.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437774|gb|ADH19935.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140274|gb|ADH97032.1| prolyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 581

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN- 67
            +  +G         R+  ++ + IR      G   +  PLL+ ++   K    +   + 
Sbjct: 33  FKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKAFLSE 92

Query: 68  KGVFSLQDDDGQWISLRY 85
           K ++ L+D + + + L  
Sbjct: 93  KLLYVLKDRENKAMCLAP 110



 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 85/297 (28%), Gaps = 21/297 (7%)

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            +K  +                ++     +D  +    + +   L   +      +    
Sbjct: 286 CQKDSEKFFAICIRGDRQINLTKVASFLQVDDCELASEEEILKHLHVEKGFIGPLYCPIP 345

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHE-LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
               E    M +F+  + +K +H       +       G   L    +L  ++G     I
Sbjct: 346 CYADETTRPMTNFICANNQKDVHCKHVNWGRDIPLPAFGDFLLAEAGDLCPQNGGAPYEI 405

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                +       T       +GF   N  ++    G+ G G                  
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIG------------------ 447

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                 + +     +             + I     D++  +      Q L T G    +
Sbjct: 448 VGRTLAACIEQLADNKGLVWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLL 507

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
              + +  G +LK +D    P  +I G   +S G+L+I+    G++ +   +N   W
Sbjct: 508 DDRNER-LGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIES-RSGEKCNVSPENLLDW 562


>gi|255013835|ref|ZP_05285961.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|256839822|ref|ZP_05545331.1| prolyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298375581|ref|ZP_06985538.1| proline--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|256738752|gb|EEU52077.1| prolyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298268081|gb|EFI09737.1| proline--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 493

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/242 (10%), Positives = 64/242 (26%), Gaps = 15/242 (6%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E        ++ +                     + S   R    
Sbjct: 170 EFLWQEGHTAHATREEAEIEAKKMQEVYANFA------ENYMAMPVIKGVKSESERFAGA 223

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G   G       + +    +          +RLI A
Sbjct: 224 LDTYTIEAMMQDGKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYAWATSWGVSTRLIGA 283

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLG 412
           L                    V+I  +   ++ L++           L+  GI  +    
Sbjct: 284 LIMSHSDDNGLVLPPHLAPIQVVIVPIYRSAEQLAQISEKVAGIVAKLKALGISVKYDDA 343

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +K  G +    + +  P+ +  G  +     +++      ++ +      E + +  + 
Sbjct: 344 DNKKPGWKFAEYELKGVPVRLAMGGRDLENNTIEVMRRDTLEKETITCDGIEEYVKNLLE 403

Query: 473 QI 474
           +I
Sbjct: 404 EI 405


>gi|167536887|ref|XP_001750114.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771443|gb|EDQ85110.1| predicted protein [Monosiga brevicollis MX1]
          Length = 550

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 2/86 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +  RI   +++ IR  Y   GF  + TP + ++ +L +         + +FS + + 
Sbjct: 217 FLPRGARIYRTLMEMIREQYIKRGFSEVVTPNI-FNKNLWETSGHWQHYQENIFSFEVEK 275

Query: 78  GQWISLRYDLTAPLARYVAENFDTIV 103
            +  +++                +  
Sbjct: 276 -EIFAMKPMNCPSHCIMFGHRKRSYR 300


>gi|160875442|ref|YP_001554758.1| threonyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189083621|sp|A9L2Q9|SYT_SHEB9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|160860964|gb|ABX49498.1| threonyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315267632|gb|ADT94485.1| threonyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 642

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/205 (8%), Positives = 57/205 (27%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+    + +  +++        +   +   +                 +       
Sbjct: 314 SEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     D+++   ++  +                    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTDSQVQEEVSACI--------QMVYDTYATFGFENIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++ +  +  RA + L +      
Sbjct: 425 EKRIGDDAMWDRAEEALKQALRDNN 449



 Score = 43.3 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  M+         +   +  +  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E     + ++       +       E +      QI++   +L+  
Sbjct: 595 VVGDQEMENKEVAVR---TRDGIDLGKMRLEDFATKIHQQISLRSLKLLEE 642


>gi|154483386|ref|ZP_02025834.1| hypothetical protein EUBVEN_01089 [Eubacterium ventriosum ATCC
           27560]
 gi|149735896|gb|EDM51782.1| hypothetical protein EUBVEN_01089 [Eubacterium ventriosum ATCC
           27560]
          Length = 579

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 63/550 (11%), Positives = 145/550 (26%), Gaps = 91/550 (16%)

Query: 19  PTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDG 78
                RI  +I + IR+  +      +  P+     SL +     +     +    D  G
Sbjct: 43  FPPMKRISQKIENIIRDEMDKLDGQEVLFPVALPG-SLWEESGRYESVGSELLRFTDRTG 101

Query: 79  QWISLRY---DLTAPLARYVAENFDTIVFPCRTYR--------------------IGPVF 115
             + L     + +  L R  A ++    F     +                    +   +
Sbjct: 102 SKMVLGMTHEEASVQLVREYANSYAKYPFMIYQIQTKFRDEARPRAGLIRVREFTMKDAY 161

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
                     + + +         A     E+ ++ +D+    G   ++Y +     +  
Sbjct: 162 SFHTSQEDLEQYYQKVYDAYSRIFARCGIPEVAIVKSDSGMMGGSISHEYMLLTPVGEDS 221

Query: 176 DGILEKIGLHGDDKLNERLI---------------------VLRAIDKLDKFGLQGVKLL 214
             I  + G   + +    +I                     +    D L        K +
Sbjct: 222 IAICPECGYSANVEAAPSIIKNENKIPKEELKEVSTPGTGTIEELCDFLKIPAENTAKAV 281

Query: 215 LGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG-----EKGF 269
           + +   D+S                + + +  D+  ++ E   ++     G     +K  
Sbjct: 282 VYQKNADDSYIVAFIRGDLDINETKLTNAVGEDIHPAVIEDDSILTAGFIGPVGISDKVT 341

Query: 270 NELVVISELVRKSGYNSNRIKISS---TIVRGLEYYTGCVYEAILGFPVMNEKQKPV--- 323
                  E +      +N++        + R            I    +     KPV   
Sbjct: 342 VYFDNSLEGIDYLVTGANKVDTHYTGFNVERDCPDAKYVDLAKITEGGICPNCGKPVINI 401

Query: 324 -----VFGSVGGGGRYDGLVSRFKGQN-----VPATGFSIGISRLIVA------LKSLES 367
                V      G +Y   ++            P  G        + A            
Sbjct: 402 SRGIEVGNIFQLGTKYSKAMNFTYTDENGKEQYPIMGCYGIGVGRMAASICEVRHDDYGP 461

Query: 368 STNNIKEMGPVLITTM-DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                     V +  +   D++   K     + L+  GI   ++       G     AD 
Sbjct: 462 IWPITIAPWQVHLCCLRSDDAECKEKADEIYETLQNMGIEV-IYDDRKARPGAMFADADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ ++      +  +++I                 S R+  + +   P+ + V+ V+
Sbjct: 521 LGVPVRVVVSPRNLAENVVEI-----------------STRDKSIDKQKTPVDQAVTEVQ 563

Query: 487 KILQENKEEI 496
            I+ +   +I
Sbjct: 564 NIINKLTADI 573


>gi|323499329|ref|ZP_08104306.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315717|gb|EGA68751.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 642

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/348 (11%), Positives = 89/348 (25%), Gaps = 7/348 (2%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  +Y I   N      I  +      D       
Sbjct: 299 MMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E    +              +
Sbjct: 359 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    +  I+       G  Y     +        
Sbjct: 418 VVKLSTRPEKRVGSDEIWDQSEEALKQSLEAMNIEYELQEGEGAFYGPKIEFTLHDCLDR 477

Query: 316 MNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
             +              G    D    R     +           + + ++         
Sbjct: 478 AWQCGTVQLDFNLPGRLGASYVDENNERQVPVMIHRAILGSLERFIGILIEEYFGFFPTW 537

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                     M+         Q   Q L+  GIRA+  L  ++  G +++    +  P  
Sbjct: 538 LSPEQA--VIMNITDKQSDYAQEVAQKLQKVGIRAKADL-RNEKIGFKIREHTLKRVPYM 594

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++          ++ +  S+ +  ++   + + E
Sbjct: 595 LVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDEISTRKLNLEE 642



 Score = 41.4 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 43/152 (28%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR   + YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   +   ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQEEVTSCIKMV 405


>gi|315638151|ref|ZP_07893333.1| proline--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481687|gb|EFU72309.1| proline--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 568

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 22/74 (29%), Gaps = 3/74 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPL-LEYSDSLGKFLPDEDRPNKGVF 71
            G  +       + ++I   I+   +  G   +ET L      S  +     +   K + 
Sbjct: 37  SGLYNFLPLGKMVYSKIESIIKEEMDKAGA--LETSLSFTTPASFWRESGRYNVFGKELL 94

Query: 72  SLQDDDGQWISLRY 85
             +D       L  
Sbjct: 95  RFKDRKENDFVLGP 108



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 5/86 (5%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +     V+I +   D  +L+      + LR  GI   +   + + +G ++   +  
Sbjct: 466 WQEALSPFKLVIILSNIKDEKALNLGISLYEDLRKLGIDVLLDDRNER-YGVKMNDFELM 524

Query: 428 NCPLAIIQGTGERSRGMLQI---KDL 450
               A+I G G      L++   KDL
Sbjct: 525 GFNYALIIGKG-LENNELELVKRKDL 549


>gi|294155633|ref|YP_003560017.1| threonine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600202|gb|ADE19698.1| threonine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 580

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + I N +   I  +   YGF  + TP     ++L K           +F  
Sbjct: 200 GFPIWLEDGMAIHNEVKKLILKMDRKYGFREVLTPHF-GEETLYKISGHLAHYKDDMFKP 258

Query: 74  QDDDGQWISLRYDLTAP 90
            + +G+ +  R  +T P
Sbjct: 259 LEVEGEKLYPRP-MTCP 274



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 29/98 (29%), Gaps = 2/98 (2%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  +   L+  +           V I  +  + ++L+  +     L     R  + 
Sbjct: 458 IGTYERFVATLLEQTKGVLPFWLAPKQVTIIPVH-EINNLTYSKEIYNTLFDHDFRVSLD 516

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +    +++ A        +I G  E++   +  +
Sbjct: 517 DREER-LSKKMREAQISKSKYQLILGDEEQNNKTISYR 553


>gi|294954482|ref|XP_002788190.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|294954484|ref|XP_002788191.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239903405|gb|EER19986.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239903406|gb|EER19987.1| prolyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 720

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 6/102 (5%)

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKD 449
            K +   + L+  G+R  +     K  G +  + + +  PL I  G  +  +G++  ++ 
Sbjct: 522 EKCKSIYEDLKANGVRVVLDDREDKTPGYKFNHWELKGVPLRIEVGAKDLEKGVVTFVRR 581

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            +  K    +  + E        Q     SEL+   +  L+E
Sbjct: 582 NSGRKSQEAKHASVEVKAALESIQ-----SELLEAARAKLEE 618


>gi|222475619|ref|YP_002564036.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida]
 gi|255003612|ref|ZP_05278576.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Puerto
           Rico]
 gi|254783506|sp|B9KH76|SYT_ANAMF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|222419757|gb|ACM49780.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida]
          Length = 636

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/255 (9%), Positives = 74/255 (29%), Gaps = 14/255 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I   I + IR   + +G+  ++TP++     L +     ++  + +F ++D D
Sbjct: 267 WHDKGWVIYRIIEEYIRCKLKKHGYLEVKTPIM-LDRKLWEKSGHWEKFKENMFVVED-D 324

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++        +       +            +    +     +            
Sbjct: 325 KKELAIKPMNCPCHVQIFKSKIRSYKELPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDD 384

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +       ++   +    E +     D+              + + +   D+   R+   
Sbjct: 385 AHIFCTHEQVRDEVLRFYELLMEVYKDFG------------FDSVTVKLSDRPENRIGSD 432

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ ++  ++ +  L  +   +       G  L     D +         +    L +
Sbjct: 433 EIWDRSEQSLMEPMNALGVQYTINKGEGAFYGPKLEFTLKDSIGREWQCGTVQLDFVLPD 492

Query: 258 LVKGTIAGEKGFNEL 272
            +     GE G   +
Sbjct: 493 RLGAYYIGEDGKKHI 507


>gi|148360654|ref|YP_001251861.1| prolyl-tRNA synthase [Legionella pneumophila str. Corby]
 gi|296106282|ref|YP_003617982.1| prolyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|166980133|sp|A5IGL5|SYP_LEGPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|148282427|gb|ABQ56515.1| prolyl-tRNA synthase [Legionella pneumophila str. Corby]
 gi|295648183|gb|ADG24030.1| prolyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 569

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 49/162 (30%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R          +  P ++ ++ L +     +  
Sbjct: 31  MIRKLGSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAE-LWQETGRWETF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              + +++D + +         ++   + R   +++  +          +R     R   
Sbjct: 90  GGQLLTMKDSNQREYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F             S +    +M        + +G+K
Sbjct: 150 MRAREFIMKDAYSFHLSIESLQETYKDMYQAYCRIFDRMGLK 191


>gi|75676225|ref|YP_318646.1| threonyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|74421095|gb|ABA05294.1| Ser-tRNA(Thr) hydrolase [Nitrobacter winogradskyi Nb-255]
          Length = 686

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 101/335 (30%), Gaps = 22/335 (6%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD--KLNE 192
              S       E         +    KR      +N    +      +  + D   +L E
Sbjct: 327 WETSGHWEWYRENMFAAQSAGDEAEDKRWFTIKPMNCPGHVQLFKHGLKSYRDLPLRLAE 386

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             +V R        GL  V+        D++  F     L  E + I    LS   +   
Sbjct: 387 FGVVHRYEPSGAMHGLMRVRG----FTQDDAHVFCTEEQLADECLKINELILSTYADFGF 442

Query: 253 HELYELV-----KGTIAGEKGFNELVV-ISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                +      +  +  +  ++     ++++++    ++NRI+  +    G  Y     
Sbjct: 443 DGELTVKLSTRPEKRVGSDAAWDHAEAVMADVLKHIAASNNRIRTETNPGEGAFYG--PK 500

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRY-----DGLVSRFKGQNVPATGFSIGISRLIVA 361
           +E +L   +  + Q            R+     D    +     V           + + 
Sbjct: 501 FEYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGGKKAPVMVHRAICGSIERFIGIL 560

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++               ++TT+  D D     ++     R AG+R E+ L  ++    ++
Sbjct: 561 IEHFAGHFPLWLAPVQAVVTTITSDGD--EYAKVVASAARRAGLRVELDL-RNEKINYKV 617

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           +       P  ++ G  E     + I+ L    + 
Sbjct: 618 REHSLAKIPALLVVGKKEAETQSVSIRRLGSDGQK 652


>gi|329113775|ref|ZP_08242547.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696901|gb|EGE48570.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 640

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 73/233 (31%), Gaps = 10/233 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E   I    LSI  +   + +            G +E+   SE   
Sbjct: 380 DDAHIFCTPEQMEAETQRICHLVLSIYKDFGFNNVRIKFSDRPEKRVGSDEIWDRSEDAL 439

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           + G  ++ +  +     G  Y      E +L   +  + Q   V   +    R D     
Sbjct: 440 RRGVEASGLSYTRNPGEGAFYG--PKLEFVLRDAIGRDWQCGTVQVDLNLPQRLDAHYVG 497

Query: 341 FKGQNVPATG-----FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
             G   P        F      + + L+           + PV +      + +      
Sbjct: 498 ADGDKHPPVMLHRALFGSLERFIGILLEHHAGHLPFW--LAPVQVVVATITAAADEYADD 555

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             + LR  G+R    L  ++    +++       P+ +I G  E   G + I+
Sbjct: 556 LIKALRQRGVRVVPDL-RNEKIAYKIREHSLAKVPVLLIVGKKEAQAGTVSIR 607



 Score = 41.4 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 4/104 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            + E P G          +   +L  +R   +   +  I TP +    SL +     ++ 
Sbjct: 254 FQPEAP-GAVFWHPNGWTLFQTLLAYLRARQQAENYVEINTPDIMDL-SLWQASGHWEKF 311

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
            + +F+ + + G+  +L+        +    +            
Sbjct: 312 GENMFTTETE-GRTYALKPMNCPGGVQVF-RHGLKSYRDLPLRM 353


>gi|300711550|ref|YP_003737364.1| threonyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125233|gb|ADJ15572.1| threonyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 640

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 5/137 (3%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
               +   V           + V ++              V I  +    D+++  +   
Sbjct: 501 NEEHRPVMVHRALLGSFERFMGVMIEHFNGKFPTWLAPEQVRILPIS--DDNVAYAEEIR 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           ++L  +  R  +    S   G +++ A     P  +I G  E + G + ++D  + +   
Sbjct: 559 EVL--SDFRVGIE-DRSWTIGKKIQTAHDDRVPYMLIVGGNEEAAGTISVRDRFERERGD 615

Query: 458 REIKNNESWREARVAQI 474
              +   +  E  V + 
Sbjct: 616 VSPEEFRTALETEVEEK 632



 Score = 43.7 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 73/254 (28%), Gaps = 13/254 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                + IR  + + IR   +  G++ + TP L   +   +    +   ++G F L +++
Sbjct: 264 YHPNGMTIRRELEEYIRTQNDALGYEEVRTPELNKKELWEESGHLDFFGSEGEFFLWEEN 323

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
                L+    A  A    +   +       +         +             +    
Sbjct: 324 ETEYGLKPMNCANHAYIYDQQVRSYRDLPVRFSEFGNVYRNEQSGELSGLLRVRGMTQDD 383

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
             A     ++   + +TL  +      +            +L K+   GD  +    +  
Sbjct: 384 GHAFIRRDQIQTEITETLRVIEEIYEQFDF---------EVLYKLETKGDHAVGSDEVWA 434

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
            A + L       ++    E   +       G  +  +  D +    +I   +    + E
Sbjct: 435 EATEAL----RNALEAEGLEYDVEEGEASFYGPKIGLDARDTLGREWTIGTVQLDFNIPE 490

Query: 258 LVKGTIAGEKGFNE 271
            +  +  GE     
Sbjct: 491 RLDLSYTGEDNEEH 504


>gi|297816202|ref|XP_002875984.1| hypothetical protein ARALYDRAFT_323549 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321822|gb|EFH52243.1| hypothetical protein ARALYDRAFT_323549 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 496

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 79/259 (30%), Gaps = 18/259 (6%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             E         +   EL+ I EL R+       + +        E + G +Y   +   
Sbjct: 148 WQEGHSAFATKAEADEELLQILELFRRIYEEFLAVPVVKGWKSEHEKFAGGLYTTSVEIF 207

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFK----------GQNVPATGFSIGISRLIVALKS 364
           + N  +      S   G  +                   QN            +++    
Sbjct: 208 IPNTGRGVQGATSNCLGQNFAKTYEINYVDEKGETATVWQNSWTYSTRTIGVMIMIHGDD 267

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQ----MYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                        V++  +   + ++ +           L  AGIRAE  LG     G +
Sbjct: 268 KGLILPPKVAPLQVVVIAVPCKNANIQRIYDACTATVSALCEAGIRAEEDLGDEYTPGWK 327

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS---REIKNNESWREARVAQITIP 477
               + +  PL I  G  +     +  K L   ++       ++   + R     +  IP
Sbjct: 328 YSDWEMKGVPLRIEIGPRDLENDQVM-KGLVFTEKTVMFGLNMELVRTVRRDNGVKEDIP 386

Query: 478 ISELVSTVKKILQENKEEI 496
              LV  VK++L++ ++ +
Sbjct: 387 RGSLVENVKELLEKIQQNM 405


>gi|295426319|ref|ZP_06818978.1| proline--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295063992|gb|EFG54941.1| proline--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 566

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + + +  E      +  P    + +L +      +    +F L
Sbjct: 38  GVYSYLPLGFRVLRKAENIMEDEMEKINVPEMMMPHFLPA-TLWQESGRYKKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           +D  G+   L    + T      +A+N  +             
Sbjct: 97  KDRHGRESLLGPTHEET--FTEIIAKNLKSYKQMPIALYQIQT 137


>gi|218709221|ref|YP_002416842.1| threonyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218322240|emb|CAV18357.1| Threonyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 655

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          Q   + L+ +G R +  L  ++  G +++    +  P  ++ G  E 
Sbjct: 557 IVMGITDKQSEYVQEIAKKLQKSGFRVKADL-RNEKIGFKIREHTLKRVPFMLVCGDQEM 615

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  S+ +A V+   + + E
Sbjct: 616 EAGEIAVRTRKGKDLGKFKVDDFISYIQAEVSSRKLNLEE 655



 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/199 (8%), Positives = 53/199 (26%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 270 MQQEAP-GMVFWHHNGWTIFRELEVFIRQKLTEYDYQEVKGPLMMDR-VLWERSGHWDKY 327

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +  +++        +   +   +                 +       
Sbjct: 328 AEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 386

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +        +           + I+ K+    
Sbjct: 387 IMRVRGFTQDDAHVFCTEDQVQQEVKACI--------EMVYDTYTTFGFENIVVKLSTRP 438

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++    +  RA   L +
Sbjct: 439 EQRVGSDEMWDRAEADLKQ 457


>gi|54293678|ref|YP_126093.1| prolyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81822437|sp|Q5WYK5|SYP_LEGPL RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|53753510|emb|CAH14965.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella pneumophila str. Lens]
          Length = 569

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 49/162 (30%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R          +  P ++ ++ L +     +  
Sbjct: 31  MIRKLGSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAE-LWQETGRWETF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              + +++D + +         ++   + R   +++  +          +R     R   
Sbjct: 90  GGQLLTMKDSNQREYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F             S +    +M        + +G+K
Sbjct: 150 MRAREFIMKDAYSFHLSLESLQETYKDMYQAYCRIFDRMGLK 191


>gi|331003535|ref|ZP_08327032.1| prolyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330412376|gb|EGG91767.1| prolyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 479

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 5/105 (4%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
               +I  +   +I    H    L         L  AG+R ++   S K+ G   K+A+ 
Sbjct: 284 KLPPHIAPVQVNIIPVAAHKEGVLEAANDLKNRLIAAGVRVKLD-DSEKSPG--FKFAES 340

Query: 427 --RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             R  PL I  G  +             G++    ++N E+  + 
Sbjct: 341 EMRGIPLRIEIGPKDIENNQCVFVRRDTGEKTFVSLENVENDAKE 385


>gi|304408774|ref|ZP_07390395.1| threonyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302777|ref|ZP_07582532.1| threonyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304352595|gb|EFM16992.1| threonyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306913137|gb|EFN43559.1| threonyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 642

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/205 (8%), Positives = 57/205 (27%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+    + +  +++        +   +   +                 +       
Sbjct: 314 SEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     D+++   ++  +                    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTDSQVQEEVSACI--------QMVYDTYATFGFENIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++ +  +  RA + L +      
Sbjct: 425 EKRIGDDAMWDRAEEALKQALRDNN 449



 Score = 43.3 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  M+         +   +  +  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E     + ++       +       E +      QI++   +L+  
Sbjct: 595 VVGDQEMENKEVAVR---TRDGIDLGKMRLEDFATKIHQQISLRSLKLLEE 642


>gi|255311199|ref|ZP_05353769.1| prolyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317500|ref|ZP_05358746.1| prolyl-tRNA synthetase [Chlamydia trachomatis 6276s]
          Length = 581

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN- 67
            +  +G         R+  ++ + IR      G   +  PLL+ ++   K    +   + 
Sbjct: 33  FKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKAFLSE 92

Query: 68  KGVFSLQDDDGQWISLRY 85
           K ++ L+D + + + L  
Sbjct: 93  KLLYVLKDRENKAMCLAP 110



 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 85/297 (28%), Gaps = 21/297 (7%)

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            +K  +                ++     +D  +    + +   L   +      +    
Sbjct: 286 CQKDSEKFFAICIRGDRQINLTKVASFLQVDDCELASEEEILKHLHVEKGFIGPLYCPIP 345

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHE-LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
               E    M +F+  + +K +H       +       G   L    +L  ++G     I
Sbjct: 346 CYADETTRPMTNFICANNQKDVHCKHVNWGRDIPLPAFGDFLLAEAGDLCPQNGGAPYEI 405

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                +       T       +GF   N  ++    G+ G G                  
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIG------------------ 447

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                 + +     +             + I     D++  +      Q L T G    +
Sbjct: 448 VGRTLAACIEQLADNKGLVWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLL 507

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
              + +  G +LK +D    P  +I G   +S G+L+I+    G++ +   +N   W
Sbjct: 508 DDRNER-LGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIES-RSGEKCNVSPENLLDW 562


>gi|237802818|ref|YP_002888012.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804740|ref|YP_002888894.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273040|emb|CAX09953.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274052|emb|CAX10846.1| prolyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 581

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN- 67
            +  +G         R+  ++ + IR      G   +  PLL+ ++   K    +   + 
Sbjct: 33  FKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKAFLSE 92

Query: 68  KGVFSLQDDDGQWISLRY 85
           K ++ L+D + + + L  
Sbjct: 93  KLLYVLKDRENKAMCLAP 110



 Score = 44.4 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 83/292 (28%), Gaps = 21/292 (7%)

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           +                ++     +D  +    + +   L   +      +        E
Sbjct: 291 EKFFAICIRGDRQINLTKVASFLQVDDCELASEEEILKHLHVEKGFIGPLYCPIPCYADE 350

Query: 236 QIDIMVSFLSIDLEKSMHE-LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               M +F+  + +K +H       +       G   L    +L  ++G     I     
Sbjct: 351 TTRPMTNFICANNQKDVHCKHVNWGRDIPLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVE 410

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +       T       +GF   N  ++    G+ G G                       
Sbjct: 411 VAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIG------------------VGRTL 452

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
            + +     +             + I     D++  +      Q L T G    +   + 
Sbjct: 453 AACIEQLADNKGLVWPLAVTPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLDDRNE 512

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +  G +LK +D    P  +I G   +S G+L+I+    G++ +   +N   W
Sbjct: 513 R-LGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIES-RSGEKCNVSPENLLDW 562


>gi|163847354|ref|YP_001635398.1| proline--tRNA ligase [Chloroflexus aurantiacus J-10-fl]
 gi|222525199|ref|YP_002569670.1| Proline--tRNA ligase [Chloroflexus sp. Y-400-fl]
 gi|163668643|gb|ABY35009.1| Proline--tRNA ligase [Chloroflexus aurantiacus J-10-fl]
 gi|222449078|gb|ACM53344.1| Proline--tRNA ligase [Chloroflexus sp. Y-400-fl]
          Length = 525

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 2/96 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                          + + T+      ++       ML+TAG    +     +  G +  
Sbjct: 419 DERGIVWPAAIAPFAIHLVTLGRGEAVVTAGHALAAMLQTAGWHVLIDDRDERA-GVKFN 477

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            AD    P  ++      +   L+I+      + + 
Sbjct: 478 DADLIGAPWRVVISEKLLAANQLEIRH-RTAAQATV 512


>gi|331232891|ref|XP_003329107.1| threonyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309308097|gb|EFP84688.1| threonyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 765

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 35/99 (35%), Gaps = 1/99 (1%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
              +G      A+ +   +      + P  +  +   +   +  Q   Q L  AG+ A+ 
Sbjct: 631 RAIMGSVERFTAILTEHFAGKWPFWLSPRQVMVIPVAAPHKAYAQEVAQKLWDAGLYADA 690

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            + S      +++  +  +    ++ G+ E     + ++
Sbjct: 691 DM-SDATLPKKIRNGEVASYNFILVVGSEELESRSVNVR 728



 Score = 41.4 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +++  ++ Y   G+D + +P + Y+  L +     +     +F L D +
Sbjct: 375 WLPHGTRIYNTLVEFFKSEYRKRGYDEVISPNM-YNAKLWQTSGHWENYADSMFKL-DIE 432

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 433 KETFGLKPMNCPG 445


>gi|255004741|ref|ZP_05279542.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Virginia]
          Length = 636

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/255 (9%), Positives = 74/255 (29%), Gaps = 14/255 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I   I + IR   + +G+  ++TP++     L +     ++  + +F ++D D
Sbjct: 267 WHDKGWVIYRIIEEYIRCKLKKHGYLEVKTPIM-LDRKLWEKSGHWEKFKENMFVVED-D 324

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++        +       +            +    +     +            
Sbjct: 325 KKELAIKPMNCPCHVQIFKSKIRSYKELPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDD 384

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +       ++   +    E +     D+              + + +   D+   R+   
Sbjct: 385 AHIFCTHEQVRDEVLRFYELLMEVYKDFG------------FDSVTVKLSDRPENRIGSD 432

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ ++  ++ +  L  +   +       G  L     D +         +    L +
Sbjct: 433 EIWDRSEQSLMEPMNALGVQYTINKGEGAFYGPKLEFTLKDSIGREWQCGTVQLDFVLPD 492

Query: 258 LVKGTIAGEKGFNEL 272
            +     GE G   +
Sbjct: 493 RLGAYYIGEDGKKHI 507


>gi|297202644|ref|ZP_06920041.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197713219|gb|EDY57253.1| prolyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 471

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/287 (9%), Positives = 71/287 (24%), Gaps = 45/287 (15%)

Query: 208 LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK 267
              ++  L    T+        A+ T E      S +   + +        +      + 
Sbjct: 142 RWELRPRLFLRTTEFLWQEGHTAHATQEDARAFASHIHRQVYEDFMTNVLAMDVVPGRKT 201

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
                      +   G   +   +       L       +                    
Sbjct: 202 VKERFAGAINTLTLEGMMGDGKALQMATSHELGQNFAKAFNTSYLSK------------- 248

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
                           Q    +   +  + +++                 V++  +  D 
Sbjct: 249 --------DGTQELVWQTSWGSTTRMIGALVMMHGDDNGLRVPPRLAQTQVVVLAIKGDE 300

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA---DRRNCPLAIIQGTGERSRGM 444
             L+K +     L+ AG+R  +   +   FG   + A   + +  P+ +  G  +   G 
Sbjct: 301 QVLAKVRDIGDRLKAAGLRVHVDDRTDTPFG---RRAVDWELKGVPVRVEVGPRDLESGT 357

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             +                   R     +  + + +LV  ++ +L+E
Sbjct: 358 AMV------------------ARRIPGGKEAVAVDDLVRLLRAVLEE 386


>gi|226528192|ref|NP_001140354.1| hypothetical protein LOC100272402 [Zea mays]
 gi|194699134|gb|ACF83651.1| unknown [Zea mays]
          Length = 285

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 22/166 (13%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +  V     QN  A         ++                  V++  + +     +  +
Sbjct: 47  EKGVREMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPKVAPIQVIVIPVPYKDADTTAIK 106

Query: 395 MYTQ----MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +     L  +GIRA+     + + G +  + + +  PL I  G  + +   +++   
Sbjct: 107 GACESTVYTLDQSGIRADQDTRENYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRV--- 163

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           R    A++ IP++ LV  VK +L E ++ +
Sbjct: 164 ---------------VRRDNGAKVDIPVTNLVEEVKVLLDEIQKNL 194


>gi|163752580|ref|ZP_02159762.1| threonyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161327534|gb|EDP98738.1| threonyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 642

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  M+              +L+  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLAPMQVVVMNITDKQSDYAHEVVNLLKENGIRASKDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
           + G  E     + ++       +       E +      QI++
Sbjct: 595 VVGDQEMENKEVAVR---TRDGVDLGKMRIEEFAAKVNKQISL 634



 Score = 44.1 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/199 (8%), Positives = 57/199 (28%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWTLFLELEKFIREKLGQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+ + ++ +   ++        +   +   +                 +       
Sbjct: 314 SEAMFTTKSEN-REYVIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   ++  +                    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVQQEVSACI--------KMVYDTYATFGFNNIVIKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++ +  +  RA + L +
Sbjct: 425 EQRIGDDEMWDRAEEALKQ 443


>gi|166154604|ref|YP_001654722.1| prolyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155479|ref|YP_001653734.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335871|ref|ZP_07224115.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|226699129|sp|B0B7W3|SYP_CHLT2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226699130|sp|B0BC28|SYP_CHLTB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|165930592|emb|CAP04089.1| prolyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931467|emb|CAP07043.1| prolyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 581

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN- 67
            +  +G         R+  ++ + IR      G   +  PLL+ ++   K    +   + 
Sbjct: 33  FKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKAFLSE 92

Query: 68  KGVFSLQDDDGQWISLRY 85
           K ++ L+D + + + L  
Sbjct: 93  KLLYVLKDRENKAMCLAP 110



 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 83/292 (28%), Gaps = 21/292 (7%)

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           +                ++     +D  +    + +   L   +      +        E
Sbjct: 291 EKFFAICIRGDRQINLTKVASFLQVDDCELASEEEILKHLHVEKGFIGPLYCPIPCYADE 350

Query: 236 QIDIMVSFLSIDLEKSMHE-LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               M +F+  + +K +H       +       G   L    +L  ++G     I     
Sbjct: 351 TTRPMTNFICANNQKDVHCKHVNWGRDIPLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVE 410

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +       T       +GF   N  ++    G+ G G                       
Sbjct: 411 VAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIG------------------VGRTL 452

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
            + +     +             + I     D++  +      Q L T G    +   + 
Sbjct: 453 AACIEQLADNKGLVWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLDDRNE 512

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +  G +LK +D    P  +I G   +S G+L+I+    G++ +   +N   W
Sbjct: 513 R-LGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIES-RSGEKCNVSPENLLDW 562


>gi|18313148|ref|NP_559815.1| prolyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74580888|sp|Q8ZVQ9|SYP_PYRAE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|18160660|gb|AAL63997.1| prolyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 488

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        ++IR  + + IR  ++  G + +  P+    +  GK         K V
Sbjct: 38  PVKGAYVWRPYGMKIRRNVENLIRKFHDETGHEEVLFPVFIPYEFFGKESQHIKGFEKEV 97

Query: 71  FSLQDDD---GQWISLRY 85
           F         G+ + LR 
Sbjct: 98  F-WVSKGGEAGERLVLRP 114



 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 74/254 (29%), Gaps = 27/254 (10%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             E + +       E+   E V I + +      +  I       +         ++ IL
Sbjct: 164 FKEAHTVHADKEDAERQVREAVEIYKRIFDEMCLAYLINKRPEWDKFAGAEYTIAFDTIL 223

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLE 366
                 +       G+          +     + +  T       R I A+         
Sbjct: 224 PDGRSLQIGTVHYLGTNFTKVFEVTYLDADGTRKLAHTTSYGISERSIAAMLITHGDDGG 283

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMY----TQMLRTAGIRAEMFLGSSKNFGNQLK 422
           ++         V++  + +  +               L  AGIR  +   + K  G +  
Sbjct: 284 TTLPPKLAPIQVVVIPIYYGEEEAPLVMPLVRETANRLNEAGIRVYVDERADKTPGWKFY 343

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
           Y + +  PL +  G  +  +    I                   R   + +  + I+ELV
Sbjct: 344 YWELKGVPLRVEIGKRDVEKRQAVI------------------ARRDTLEKYAVSINELV 385

Query: 483 STVKKILQENKEEI 496
             VK++++  +E +
Sbjct: 386 DAVKQLMKSVEENL 399


>gi|86147528|ref|ZP_01065839.1| threonyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834696|gb|EAQ52843.1| threonyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 642

 Score = 46.0 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          Q   + L+ +G R +  L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 IVMGITDKQSEYVQEIAKKLQKSGFRVKADL-RNEKIGFKIREHTLKRVPFMLVCGDQEM 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  S+ +A V+   + + E
Sbjct: 603 EAGEIAVRTRKGKDLGKFKVDDFISYIQAEVSSRKLNLEE 642



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/199 (8%), Positives = 53/199 (26%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWTIFRELEVFIRQKLTEYDYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +  +++        +   +   +                 +       
Sbjct: 315 AEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +        +           + I+ K+    
Sbjct: 374 IMRVRGFTQDDAHVFCTEDQVQQEVKACI--------EMVYDTYTTFGFENIVVKLSTRP 425

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++    +  RA   L +
Sbjct: 426 EQRVGSDEMWDRAEADLKQ 444


>gi|302389803|ref|YP_003825624.1| YbaK/prolyl-tRNA synthetase associated region [Thermosediminibacter
           oceani DSM 16646]
 gi|302200431|gb|ADL08001.1| YbaK/prolyl-tRNA synthetase associated region [Thermosediminibacter
           oceani DSM 16646]
          Length = 489

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 34/100 (34%), Gaps = 4/100 (4%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              + I     V+I     D   L +     + L    I   +     ++ G + K A+ 
Sbjct: 379 IWPDFIAPYKVVVIPVNTKDERLLDRSIKVYEEL--NKIMPTIIDDRPQSPGVKFKDAEL 436

Query: 427 RNCPLAIIQGTGERSRGMLQIKDL-AKGKELSREIKNNES 465
              P+ I  G     +G+ +I +L   G+ +  E      
Sbjct: 437 LGFPIRITIGPRSLEKGVAEI-NLRRTGEMVEVEFGRITE 475


>gi|299471018|emb|CBN78879.1| threonine--tRNA ligase [Ectocarpus siliculosus]
          Length = 704

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI NR+++ IR+ Y   G++ + TP +   D L +           +F  
Sbjct: 416 GSAFFLPHGTRIYNRLMEFIRSEYWKRGYEEVTTPNMYNMD-LWEQSGHAAHYKDAMFRF 474

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
             + GQ   L+           ++
Sbjct: 475 PVE-GQEFGLKPMNCPGHCIMFSQ 497


>gi|254508889|ref|ZP_05120998.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548203|gb|EED25219.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 129

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+         Q   Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 31  VIMNITDKQADYAQEVAQKLQKVGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 89

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  S+ +  ++   + + E
Sbjct: 90  EAGEIAVRTRKGKDLGKFKVDDFISYIQDEISTRKLNLEE 129


>gi|164657235|ref|XP_001729744.1| hypothetical protein MGL_3288 [Malassezia globosa CBS 7966]
 gi|159103637|gb|EDP42530.1| hypothetical protein MGL_3288 [Malassezia globosa CBS 7966]
          Length = 635

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/139 (8%), Positives = 43/139 (30%), Gaps = 13/139 (9%)

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
              +G     +A+     +      + P  +  +          +    +L   G  A+ 
Sbjct: 499 RAVVGSLERFIAILIENFAGKWPFWLSPRQVLVVPVTQSVYEYAEEVRALLWDRGFFADA 558

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            L  +     +++  +        + G  E+    + +++                 +  
Sbjct: 559 DLSDN-TLNKKIRNGELAQYNFVFVVGHEEKETRSVNVRNRDN------------DPKVM 605

Query: 470 RVAQITIPISELVSTVKKI 488
           +    TI + ++++ ++K+
Sbjct: 606 KGKTDTIKLDDILAKLQKL 624



 Score = 43.7 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N + D I++ Y   GFD + +P + Y+  L +           +F L   D
Sbjct: 247 WLPHGARIYNTLQDFIKSEYRKRGFDEVISPNM-YNSKLWETSGHWANYKDDMFVLS-VD 304

Query: 78  GQWISLRYDLTAPLARYVAEN 98
            +  +L+           A  
Sbjct: 305 KETFALKPMNCPGHCLMFASR 325


>gi|21220965|ref|NP_626744.1| glycyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256787874|ref|ZP_05526305.1| glycyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289771758|ref|ZP_06531136.1| glycyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|11387143|sp|Q9L2H9|SYG_STRCO RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|6752347|emb|CAB69725.1| glycyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289701957|gb|EFD69386.1| glycyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 460

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 29/97 (29%), Gaps = 3/97 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  +  + +   K +   Q LR      E     +   G + +  D    P  +
Sbjct: 363 SPVKVAVLPLSRNPELSPKAKGLAQALR-QNWNIEFD--DAGAIGRRYRRQDEIGTPFCV 419

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                      + +++    K+    +   E +  +R
Sbjct: 420 TVDFDTLDDNAVTVRERDTMKQERVSLDQIEGYLASR 456


>gi|24373852|ref|NP_717895.1| threonyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|73919825|sp|Q8EER9|SYT_SHEON RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24348259|gb|AAN55339.1|AE015671_6 threonyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 642

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/199 (8%), Positives = 57/199 (28%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+    + +  +++        +   +   +                 +       
Sbjct: 314 SEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   ++  +               +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVQAEVSSCI--------QMVYDTYSTFGFENIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++ +  +  RA + L +
Sbjct: 425 EKRIGDDAMWDRAEEALKQ 443



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  M+         +   +  +  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E     + ++       +       E +      QI++   +L+  
Sbjct: 595 VVGDQEMENKEVAVR---TRDGVDLGKMRIEDFAAKIHQQISLRSLKLLEE 642


>gi|85716379|ref|ZP_01047351.1| threonyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85696736|gb|EAQ34622.1| threonyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 679

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 101/335 (30%), Gaps = 22/335 (6%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD--KLNE 192
              S       E         +    KR      +N    +      +  + D   +L E
Sbjct: 328 WETSGHWEWYRENMFAAQSAGDEAEDKRWFTIKPMNCPGHVQLFKHGLKSYRDLPLRLAE 387

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
             +V R        GL  V+        D++  F     L  E + I    LS   +   
Sbjct: 388 FGVVHRYEPSGAMHGLMRVRG----FTQDDAHVFCTEEQLADECLKINELILSTYADFGF 443

Query: 253 HELYELV-----KGTIAGEKGFNELVV-ISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                +      +  +  +  ++     +++++++   ++NRIK       G  Y     
Sbjct: 444 DGELTVKLSTRPEKRVGSDAAWDHAEAVMADVLKRIAASNNRIKTEINPGEGAFYG--PK 501

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRY-----DGLVSRFKGQNVPATGFSIGISRLIVA 361
           +E +L   +  + Q            R+     D    +     V           + + 
Sbjct: 502 FEYVLRDAIGRDWQCGTTQVDFNLPERFGAFYIDADGGKKAPVMVHRAICGSIERFIGIL 561

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++               ++TT+  D D  +K        R AG+R E+ L  ++    ++
Sbjct: 562 IEHFAGHFPLWLAPVQAVVTTITSDGDEYAKA--VASAARRAGLRVELDL-RNEKINYKV 618

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           +       P  ++ G  E     + I+ L    + 
Sbjct: 619 REHSLAKIPALLVVGKKEAETESVSIRRLGSDGQK 653


>gi|328543265|ref|YP_004303374.1| Threonyl-tRNA synthetase [polymorphum gilvum SL003B-26A1]
 gi|326413011|gb|ADZ70074.1| Threonyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 654

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 90/268 (33%), Gaps = 12/268 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNELVVIS 276
           D++  F     L +E + I    LS+  +    E+   +          +  ++    + 
Sbjct: 387 DDAHIFCTEEQLAAECLKINDLILSVYQDFGFEEIVVKLSTRPEKRVGSDALWDHAEEVM 446

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-- 334
             V K   + +  +I + I+ G   + G  +E  L   +  E Q            R+  
Sbjct: 447 TRVLKQIEDQSGGRIKTGILPGEGAFYGPKFEYTLRDAIGREWQCGTTQVDFNLPERFGA 506

Query: 335 ---DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
              D    +     V           L + +++             V++ T+  ++D   
Sbjct: 507 FYVDKDGEKKTPVMVHRAICGSMERFLGILIENFAGHFPLWLAPRQVVVATITSEAD--D 564

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLA 451
             +     L  AG+RA++ L  ++    +++       P+ ++ G  E     + ++ L 
Sbjct: 565 YAKEVHAALTKAGLRADLDL-RNEKINYKVREHSLAKTPVILVCGKREAEERTVNVRRLG 623

Query: 452 KGKELSREIKNNESWREARVAQITIPIS 479
           K  +++  ++   +          +  +
Sbjct: 624 KADQVAMGLEEAIAAFAEEAVPPDVKRA 651


>gi|297199539|ref|ZP_06916936.1| glycyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197713535|gb|EDY57569.1| glycyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 460

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  +++   K +   Q LR      E     +   G + +  D    P  +    
Sbjct: 367 VAVLPLSRNAELSPKAKGLAQALR-QNWNIEFD--DAGAIGRRYRRQDEIGTPYCVTVDF 423

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    K+    +   E +  AR
Sbjct: 424 DTLDDNAVTVRERDSMKQERVSLDQIEGYLAAR 456


>gi|332297427|ref|YP_004439349.1| glycyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180530|gb|AEE16218.1| glycyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 448

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/260 (11%), Positives = 66/260 (25%), Gaps = 35/260 (13%)

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE----YY 302
           + +K      E             E +      + + Y  +   I      G +     +
Sbjct: 211 EDDKWFEYWREQRWSFYKKYGIHMEKLRWYHHEKLAHYAKDAYDIEYEFPMGFQELEGVH 270

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFK---GQNVPATGFSIGISRLI 359
               ++         +  + +      G  +Y   +        +N+          + +
Sbjct: 271 NRTNFDLTRHTEFSGKDMQYIDQ--DNGNEKYIPYIIETSAGLTRNLLMFLCDAYEEQNV 328

Query: 360 VALKSLE-----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
            A  + E        +       V I  +          Q     L+   +        S
Sbjct: 329 AAAGAPEDYRTVLHFHPKIAPVTVAILPLMKKDGLAELAQEIRAELQEEFV---TDYDQS 385

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              G + +  D    P  I      +  G + I+                      + QI
Sbjct: 386 GTIGKRYRRQDEIGTPFCITVDHDTKEDGTVTIR------------------FRDSMEQI 427

Query: 475 TIPISELVSTVKKILQENKE 494
            +P SELVS + + ++  K 
Sbjct: 428 RVPRSELVSRLHQEIKNYKR 447


>gi|330834227|ref|YP_004408955.1| prolyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566366|gb|AEB94471.1| prolyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 480

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +IR+ ++  IR + +  G + I  PLL   + L K         K V
Sbjct: 32  PIKGAGVWMPYGFKIRHNVISLIRKLLDETGHEEILFPLLIPEELLKKESEHIRGFEKEV 91

Query: 71  FSLQDDDGQW-----ISLRY 85
           F      G+       +LR 
Sbjct: 92  F-WVTQGGEEKLETRFALRP 110



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 22/123 (17%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           V+I       +   K   Y + +R+     GIRA M     K  G +    + +  P+ +
Sbjct: 292 VIIPIPGKSEEDTKKVFSYAEEVRSTLASNGIRAVMDSSEDKTPGEKFYIWELKGVPIRV 351

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
             G  E + G + +K                  R   +    +   +LV  +K + +  +
Sbjct: 352 ETGVREMNSGSVYLK------------------RRDTLEGKVVKREDLVKELKNMEKTIE 393

Query: 494 EEI 496
           E++
Sbjct: 394 EDM 396


>gi|156717366|ref|NP_001096223.1| probable threonyl-tRNA synthetase 2, cytoplasmic [Xenopus
           (Silurana) tropicalis]
 gi|123909108|sp|Q0V9S0|SYTC2_XENTR RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|111307891|gb|AAI21418.1| tarsl2 protein [Xenopus (Silurana) tropicalis]
          Length = 814

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 38/116 (32%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K + V      +G    ++A+            + P  +  +         
Sbjct: 665 TYVSKDGDDKKRPVIIHRAILGSVERMIAILCENYGGKWPFWLSPRQVMVIPVGPSCDEY 724

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q   + +  AG  AE+ L  S     +++ A    C   ++ G  E++   + ++
Sbjct: 725 AQQVCKDVFEAGFMAEVDLDHSCTLNKKIRNAQLAQCNFILVVGEKEKTDSAVNVR 780



 Score = 37.1 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N + D I+  Y+   F  + +P + Y+  L +        ++ +FS + + 
Sbjct: 436 FLPRGAHIYNTLTDFIKGEYQIRNFTEVASPNI-YNSKLWEMSGHWQHYSENMFSFEVEK 494

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 495 -ETFALKPMNCPG 506


>gi|54296718|ref|YP_123087.1| prolyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81822631|sp|Q5X756|SYP_LEGPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|53750503|emb|CAH11897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA
           synthesis factor) [Legionella pneumophila str. Paris]
          Length = 569

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 49/162 (30%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R          +  P ++ ++ L +     +  
Sbjct: 31  MIRKLGSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAE-LWQETGRWETF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              + +++D + +         ++   + R   +++  +          +R     R   
Sbjct: 90  GGQLLTMKDSNQREYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F             S +    +M        + +G+K
Sbjct: 150 MRAREFIMKDAYSFHLSLESLQETYKDMYQAYCRIFDRMGLK 191


>gi|332880161|ref|ZP_08447843.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681920|gb|EGJ54835.1| proline--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 493

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 69/235 (29%), Gaps = 17/235 (7%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+        L V ++   +         + S   R          EA+
Sbjct: 173 WQEGHTAHATREEAEERAKLMLKVYADFAEQYMAVPVVQGVKSETERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G   G       +++               +RL+ AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFGKAFNVQFINKDNKLEYAWATSWGVSTRLMGALIMTHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  +++ L     K +     LR  GI  +     +K  G   
Sbjct: 293 GLVLPPKLAPIQVVIVPIYKNAEQLKAIDEKVEGIVARLRALGISVKYDNADNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           K+AD   +  P+ ++ G  +     +++      ++ +R     E + +  + +I
Sbjct: 351 KFADYELKGVPVRLVMGGRDLENNTVEVMRRDTLEKETRTCDGIEDYVKTLLDEI 405


>gi|303248736|ref|ZP_07334989.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302489901|gb|EFL49829.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 647

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 5/97 (5%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +      ++   D   +   + +     L  AGIR E+    ++  G +++ A 
Sbjct: 530 GALPTWLSPEQARILIVTDAQKEFAEEAKA---KLAEAGIRVELD-ERNEKLGFKVREAQ 585

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
               P  ++ G  E+  G L ++ L  G+ L  +  +
Sbjct: 586 MEKVPYMLVAGDKEKELGGLNVR-LRSGENLGVKSLD 621



 Score = 42.1 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 41/145 (28%), Gaps = 9/145 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  + D  R  +   G+  +  PL+   +   +     D   + ++  
Sbjct: 262 GMPIWHPKGELIRTILEDFERREHLRRGYQLVRGPLILRRELWERS-GHYDNYRENMY-F 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + DGQ   ++             +        R+YR  P    E     R  +      
Sbjct: 320 TEIDGQAYGIKPMN-------CLSHMLIYKSRVRSYRDLPQRYFELGVVHRHEKSGVLHG 372

Query: 134 DNVGSSAETADAEMCMMMADTLEAV 158
                     DA +       L+ +
Sbjct: 373 LMRVRQFTQDDAHILCRPDQLLDEI 397


>gi|227548800|ref|ZP_03978849.1| glycyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079130|gb|EEI17093.1| glycyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 460

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/94 (12%), Positives = 30/94 (31%), Gaps = 5/94 (5%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           V +  +    +     +   Q LR        +   +S   G + +  D    P  +   
Sbjct: 367 VAVLPLSKKPELSGPAEDLAQTLRQHWN----VDYDTSGAIGRRYRRQDEIGTPFCVTFD 422

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                   + +++    ++   +I   ES+  A+
Sbjct: 423 FDSLEDNAVTVRERDTMQQERVKIDELESYLAAQ 456


>gi|303277857|ref|XP_003058222.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460879|gb|EEH58173.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 683

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 5/86 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGT 437
           I  + +DS   +  +  ++ L + G+  ++   ++   G   +YA  D    P A+    
Sbjct: 572 IFPLVNDSGMNAHAEKLSRELSSEGVSTKLD-TTATTVGK--RYARNDELGIPFAVTVDH 628

Query: 438 GERSRGMLQIKDLAKGKELSREIKNN 463
                G + +++     ++     + 
Sbjct: 629 RTLQDGTVTVRERDSCDQVRVLSADV 654


>gi|167755650|ref|ZP_02427777.1| hypothetical protein CLORAM_01165 [Clostridium ramosum DSM 1402]
 gi|167704589|gb|EDS19168.1| hypothetical protein CLORAM_01165 [Clostridium ramosum DSM 1402]
          Length = 457

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/232 (9%), Positives = 51/232 (21%), Gaps = 13/232 (5%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +     +K + +L    +     +    EL   S+                        
Sbjct: 235 DYWKSYCQKFLFDLGLKEENLRFRDHEKEELSFYSK-----ATCDVEYNFPFGWGELWGI 289

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                Y+        N  +K + +       +Y   V              +  S     
Sbjct: 290 ADRTNYDLT---QHQNHSKKSLEYLDPTTNEKYIPYVIEPSVGADRLFLSVLCDSYEEEI 346

Query: 362 LK--SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           L+             + P  +  +        K       L       E     +   G 
Sbjct: 347 LEDGETRVVMKLHPSVAPFKVAILPLTKKQSDKATEIYGQL-AKYFNCE--YDVAGQIGK 403

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           + +  D    P  +           + ++D    +++   I     +   ++
Sbjct: 404 RYRRQDAIGTPYCVTVDFDTMEDETVTVRDRDTMEQIRLPINQLVDYISKKI 455


>gi|289758965|ref|ZP_06518343.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T85]
 gi|289714529|gb|EFD78541.1| prolyl-tRNA synthetase proS [Mycobacterium tuberculosis T85]
          Length = 513

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 2/92 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             L     +      V +   + D+ + +        L   G+   +      + G + K
Sbjct: 404 DELGLRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLD-DRQASPGVKFK 462

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            A+    P  ++ G    + G+++++D   G+
Sbjct: 463 DAELLGMPWIVVVG-RGWADGVVELRDRFSGQ 493


>gi|262189799|ref|ZP_06048144.1| prolyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262034317|gb|EEY52712.1| prolyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 91

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          +     L  AGI   +F    +  G      +    P  II G    
Sbjct: 1   MNMHKSERVQQAAEKLYAELTAAGIEV-LFDDRKERPGVMFSDMELIGVPHTIIIGDRSM 59

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             G  + K+  +G++ +  +++   + +A++A
Sbjct: 60  DEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 91


>gi|146293114|ref|YP_001183538.1| threonyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166225500|sp|A4Y706|SYT_SHEPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145564804|gb|ABP75739.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella
           putrefaciens CN-32]
          Length = 642

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/199 (9%), Positives = 57/199 (28%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+    + +  +++        +   +   +                 +       
Sbjct: 314 SEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     D ++   ++  +               +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTDDQVQEEVSACI--------QMVYDTYSTFGFENIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++ +  +  RA + L +
Sbjct: 425 EKRIGDDAMWDRAEEALKQ 443



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  M+         Q   +  +  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLAPMQVVVMNITDKQADYVQEIVKFFKEQGIRASFDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E     + ++       +       E +      QI++   +L+  
Sbjct: 595 VVGDQEMENKEVAVR---TRDGIDLGKMRLEDFATKIHQQISLRSLKLLEE 642


>gi|311068179|ref|YP_003973102.1| prolyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310868696|gb|ADP32171.1| prolyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 564

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 32/101 (31%), Gaps = 4/101 (3%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G         ++   I   +R   E      +  P L+ +++  +           +  
Sbjct: 37  SGVYSYMPLAYKVIKNIQTIVREELEKINAVEMLMPALQQAETWQES-GRWYTYGPELMR 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYR 110
           L+D  G+  +L     ++   L R   +++  +       +
Sbjct: 96  LKDRHGREFALGATHEEVVTSLVRDEVKSYKRLPLTLYQIQ 136



 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 35/109 (32%), Gaps = 3/109 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK-YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          + I  ++  +D+  +  +   +  +T G        + +  G + 
Sbjct: 458 DEKGLIWPKSVAPYDLHILALNMKNDAQKELAEKLYETFKTEGYDVLFDDRAERA-GVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
             +D    P+ I  G      G++++K    G+     I+    +   +
Sbjct: 517 ADSDLIGLPIRITVGKR-ADEGIVEVKIRKTGESSEVSIEELSDFINKQ 564


>gi|76789124|ref|YP_328210.1| prolyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|114152182|sp|Q3KLW0|SYP_CHLTA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|76167654|gb|AAX50662.1| prolyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
          Length = 581

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN- 67
            +  +G         R+  ++ + IR      G   +  PLL+ ++   K    +   + 
Sbjct: 33  FKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKAFLSE 92

Query: 68  KGVFSLQDDDGQWISLRY 85
           K ++ L+D + + + L  
Sbjct: 93  KLLYVLKDRENKAMCLAP 110



 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 83/292 (28%), Gaps = 21/292 (7%)

Query: 176 DGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           +                ++     +D  +    + +   L   +      +        E
Sbjct: 291 EKFFAICIRGDRQINLTKVASFLQVDDCELASEEEILKHLHVEKGFIGPLYCPIPCYADE 350

Query: 236 QIDIMVSFLSIDLEKSMHE-LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST 294
               M +F+  + +K +H       +       G   L    +L  ++G     I     
Sbjct: 351 TTRPMTNFICANNQKDVHCKHMNWGRDIPLPAFGDFLLAEAGDLCPQNGGAPYEIFQGVE 410

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
           +       T       +GF   N  ++    G+ G G                       
Sbjct: 411 VAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIG------------------VGRTL 452

Query: 355 ISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
            + +     +             + I     D++  +      Q L T G    +   + 
Sbjct: 453 AACIEQLADNKGLVWPLAVTPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLLDDRNE 512

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           +  G +LK +D    P  +I G   +S G+L+I+    G++ +   +N   W
Sbjct: 513 R-LGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIES-RSGEKCNVSPENLLDW 562


>gi|15605118|ref|NP_219903.1| prolyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|6686306|sp|P36431|SYP_CHLTR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3328819|gb|AAC67990.1| Prolyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748523|gb|ADI51069.1| Prolyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749403|gb|ADI52081.1| Prolyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 581

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN- 67
            +  +G         R+  ++ + IR      G   +  PLL+ ++   K    +   + 
Sbjct: 33  FKTSKGIYSYTPLFQRVILKMTEIIREELNAIGGQEVCLPLLQPAELWEKTGRWKAFLSE 92

Query: 68  KGVFSLQDDDGQWISLRY 85
           K ++ L+D + + + L  
Sbjct: 93  KLLYVLKDRENKAMCLAP 110



 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 85/297 (28%), Gaps = 21/297 (7%)

Query: 171 NRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGA 230
            +K  +                ++     +D  +    + +   L   +      +    
Sbjct: 286 CQKDSEKFFAICIRGDRQINLTKVASFLQVDDCELASEEEILKHLHVEKGFIGPLYCPIP 345

Query: 231 NLTSEQIDIMVSFLSIDLEKSMHE-LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRI 289
               E    M +F+  + +K +H       +       G   L    +L  ++G     I
Sbjct: 346 CYADETTRPMTNFICANNQKDVHCKHVNWGRDIPLPAFGDFLLAEAGDLCPQNGGAPYEI 405

Query: 290 KISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT 349
                +       T       +GF   N  ++    G+ G G                  
Sbjct: 406 FQGVEVAHIFNLGTRYTESFSVGFQDKNGDKQLCWMGTYGIG------------------ 447

Query: 350 GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
                 + +     +             + I     D++  +      Q L T G    +
Sbjct: 448 VGRTLAACIEQLADNKGLVWPLAVAPFSITILYNGGDTEGEATALQLYQSLNTEGFEPLL 507

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
              + +  G +LK +D    P  +I G   +S G+L+I+    G++ +   +N   W
Sbjct: 508 DDRNER-LGFKLKDSDLLGIPYKLIIGKSFQSTGLLEIES-RSGEKCNVSPENLLDW 562


>gi|120598808|ref|YP_963382.1| threonyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166225502|sp|A1RJI3|SYT_SHESW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|120558901|gb|ABM24828.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp.
           W3-18-1]
          Length = 642

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/199 (9%), Positives = 57/199 (28%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+    + +  +++        +   +   +                 +       
Sbjct: 314 SEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     D ++   ++  +               +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTDDQVQEEVSACI--------QMVYDTYSTFGFENIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++ +  +  RA + L +
Sbjct: 425 EKRIGDDAMWDRAEEALKQ 443



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  M+         Q   +  +  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLAPMQVVVMNITDKQADYVQEIVKFFKEQGIRASFDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E     + ++       +       E +      QI++   +L+  
Sbjct: 595 VVGDQEMENKEVAVR---TRDGIDLGKMRLEDFATKIHQQISLRSLKLLEE 642


>gi|299140723|ref|ZP_07033861.1| proline--tRNA ligase [Prevotella oris C735]
 gi|298577689|gb|EFI49557.1| proline--tRNA ligase [Prevotella oris C735]
          Length = 493

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 78/297 (26%), Gaps = 43/297 (14%)

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
              + + ++  +       +      L +        FL  +   +     E      A 
Sbjct: 140 HSWRDLPIMCNQWCNVMRWEMRTRPFLRTS------EFLWQEGHTAHATREE------AE 187

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
            +    L V ++   K         + S   R          EA++      +       
Sbjct: 188 VEAQKMLKVYADFAEKWMAVPVLQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFL 247

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLI 380
           G           +++               +RL+ AL                    V+I
Sbjct: 248 GQNFAKSFDVTFLNKENKPEYVWATSWGVSTRLMGALIMVHSDDNGLVLPPKLAPIQVII 307

Query: 381 TTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAII 434
             +    D L     K Q     L   GI  +     +K  G   K+AD   +  P+ ++
Sbjct: 308 VPIYKGDDQLKAISNKLQPVINKLEELGISVKYDDSDNKRPG--FKFADYELKGIPVRLV 365

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            G  +     ++I                   R   + + ++    ++  V  +L +
Sbjct: 366 MGGRDLENNTIEI------------------MRRDTLEKESVSFDGIIERVTTLLDD 404


>gi|260914069|ref|ZP_05920542.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631702|gb|EEX49880.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 644

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 42/342 (12%), Positives = 91/342 (26%), Gaps = 8/342 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFEN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +    N ++       G  Y     + A+    
Sbjct: 416 IQVKLSTRPEKRIGADEMWERAEAGLAAALAHNGLEYEIQEGEGAFYGPKIEF-ALRDSL 474

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
               +   +       G      V+    +  P       +G     + + + E +    
Sbjct: 475 DREWQCGTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P     M+         Q   + L  AG+R +  L  ++  G +++    R  P  
Sbjct: 535 AWLAPTQAVVMNITDSQSEYVQKVVKTLSDAGLRVKSDL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + ++     K         E + +    Q+
Sbjct: 594 LVCGDKEIEAGKVAVR---TRKGADLGTFTIEEFLDILKKQV 632



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 GDLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIKMV 404


>gi|26553794|ref|NP_757728.1| glycyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|59798587|sp|Q8EW64|SYG_MYCPE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|26453801|dbj|BAC44132.1| glycyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 462

 Score = 45.6 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 3/92 (3%)

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
            E+ P     +   +    K +     L  + I       SS + G + +  D    P  
Sbjct: 362 PELAPYKFAVLPLSNKLNDKAEEIFNNLILSNICT---YDSSGSIGKRYRRQDAIGTPYC 418

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           I           + I+D    K++  +IK+ +
Sbjct: 419 ITVDFDTLEDECVTIRDRDSMKQIRIKIKDID 450


>gi|326925418|ref|XP_003208912.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 470

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 42/157 (26%), Gaps = 9/157 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                +R   +++  I     N G   +  P L  ++ L +     ++    +F L D  
Sbjct: 85  LLPPAVRSMEKLIRLIDGAMRNIGGQKVNMPSLSSAE-LWRASGRWEQMGPELFRLADRH 143

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTY-RIGPVFRNEKHGPGR-------FRQFI 129
            +   L       +   VA + +                  ++  P         F    
Sbjct: 144 SKEYCLGPTHEEAVTELVAAHSNLSYRHLPLRLYQVTRKFRDEPKPRFGLLRSREFYMKD 203

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166
               D    +A      +C       + +G++     
Sbjct: 204 MYTFDTSEEAARHTYELVCRAYRSLFKHLGLRCVQVR 240


>gi|320334724|ref|YP_004171435.1| glycyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756013|gb|ADV67770.1| glycyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 504

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 63/490 (12%), Positives = 138/490 (28%), Gaps = 51/490 (10%)

Query: 14  GFADCPTKEIRIRNRILDSI--RNIYENYGFDPIETPLLEYSDSLGKFLPD--------E 63
           GF D     + ++N I  +    N+YE    + ++  ++ +   L     +        +
Sbjct: 31  GFYDYGPLGVELKNNIKQAWWRTNVYERDDMEGLDASIIMHRMVLRHSGHEATFSDPMVD 90

Query: 64  DRPNKGVFSL----QDDD-----------GQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
           +R  K  + L    +D             G+ +    +  A L   + +N          
Sbjct: 91  NRKTKKRYRLDHLVKDQKPAVQQAVAEAMGESL----ENFAALVAAMVKNPARASEALIA 146

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
             +   F  E       + F       +G +A+                   K       
Sbjct: 147 GGVRDAFSGEVGDWTEPKPFNMMFKTTIGPTADEDSYGYLRPETAQGIFTNFKNVVDSTS 206

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
                 +  I +        +     +      +++ F   G      E        +  
Sbjct: 207 RRLPFGIAQIGKAFRNEITPRNFIFRVRELEQMEIEFFCAPGTDEDWHEHWLQARLAWWA 266

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
              +  E+I  ++     DL       Y+L+        G+ E+  I+        +  +
Sbjct: 267 AQGVPREKIQ-ILDVPKEDLAHYSKRTYDLMYDYPTL--GYEEIEGIANRSDYDLGSHTK 323

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
            +    I   +E     V +  +  P  N+   P V     G    D  +     +    
Sbjct: 324 AQGELGIQARVEENLDSVAKLTIPHPDTNKPVVPFVIEPSAGV---DRAMLAVLSEAYTK 380

Query: 349 TGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRA 407
                G  R+++ LK              V +  +  +  + +S  +     L+  G+  
Sbjct: 381 ETLENGSERIVLKLK-------PHLAPIKVAVIPLARNREEIVSVAKSVKADLQKLGLG- 432

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQ-------GTGERSRGMLQIKDLAKGKELSREI 460
            +    S N G   +  D    P  +         G  E     + ++D     +   +I
Sbjct: 433 RILFEDSGNIGKAYRRHDEVGTPFCVTVDFDTVGKGEDEALVDTVTVRDRDTLAQERVKI 492

Query: 461 KNNESWREAR 470
            +  ++  +R
Sbjct: 493 SDLAAYLTSR 502


>gi|296114661|ref|ZP_06833313.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978757|gb|EFG85483.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 603

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 74/241 (30%), Gaps = 26/241 (10%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E   I    LSI  +    ++            G +E+   SE   
Sbjct: 343 DDAHIFCTPEQMEAETQRICHLVLSIYKDFGFDDVRIKFSDRPEKRVGSDEIWDRSEEAL 402

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
           + G  ++ +  +     G  Y      E +L   +  + Q   V   +    R D     
Sbjct: 403 RRGVEASGLSYTRNPGEGAFYG--PKLEFVLRDAIGRDWQCGTVQVDLNLPQRLDAHYIG 460

Query: 341 FKGQNVPATG-----FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
             G   P        F      + + L+              V++ T+   +D+ +    
Sbjct: 461 ADGDKHPPVMLHRALFGSLERFIGILLEHHAGHLPFWLAPVQVVVATITAAADNYAD--D 518

Query: 396 YTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
             + LR  G+R    L + K        +             P+ +I G  E   G + I
Sbjct: 519 LIKALRQRGVRVVPDLRNEKIAYKVREHSLAK---------VPVLLIVGKKEAEAGTVSI 569

Query: 448 K 448
           +
Sbjct: 570 R 570



 Score = 41.4 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 4/104 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            + E P G          +   +L  +R   +   +  I TP +    SL +     ++ 
Sbjct: 217 FQPEAP-GAVFWHPNGWTLFQTLLAYLRARQQAENYVEINTPDIMDL-SLWQASGHWEKF 274

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYR 110
            + +F+ + + G+  +L+        +    +            
Sbjct: 275 GENMFTTETE-GRTYALKPMNCPGGVQVF-RHGLKSYRDLPLRM 316


>gi|262043501|ref|ZP_06016622.1| tetraacyldisaccharide 4'-kinase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039164|gb|EEW40314.1| tetraacyldisaccharide 4'-kinase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 123

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M          +   + LR  G+R E  L  ++  G +++       P  +
Sbjct: 19  WLSPVQAVVMTITDKQHHYAEQVLKALRKKGLRCEADL-RNEKIGFKIREQTLARIPFLL 77

Query: 434 IQGTGERSRGMLQIKDLAKG 453
           I G  E +   + ++D   G
Sbjct: 78  IVGDAEENAARVTVRD-RTG 96


>gi|333030425|ref|ZP_08458486.1| Prolyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332741022|gb|EGJ71504.1| Prolyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 493

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 64/213 (30%), Gaps = 13/213 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V SE   K         + +   R          EA++      +       G     
Sbjct: 194 LNVYSEFAEKYMAVPVVKGVKTASERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V+R               +RL+ AL                    V+I  +   
Sbjct: 254 AFDVKFVNRENQLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPALAPIQVVIVPIFKG 313

Query: 387 SDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + L+K           L+  G+  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 EEQLAKIDERVNPIINKLKGMGVSVKYDNADNKRPG--FKFADYELKGVPVRLVLGARDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             G +++      ++ +  I+  E + +  + +
Sbjct: 372 ENGTIEVMRRDTLEKTTHSIEGIEEYVKDLLDE 404


>gi|70998636|ref|XP_754040.1| glycyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66851676|gb|EAL92002.1| glycyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159126226|gb|EDP51342.1| glycyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 699

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 27/91 (29%), Gaps = 5/91 (5%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VLI  +   +      Q     LR  GI   +   SS + G   +YA  D    P  
Sbjct: 582 PTKVLIVPLSTHASFRPLLQQLMTKLRRMGISNRVD-DSSASIGK--RYARNDELGTPFG 638

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           I             ++D    K++       
Sbjct: 639 ITVDFQSVKDNTFTLRDRDTTKQVRASEDEI 669


>gi|229076294|ref|ZP_04209259.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229099375|ref|ZP_04230305.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229105535|ref|ZP_04236169.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229118387|ref|ZP_04247741.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228664957|gb|EEL20445.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228677805|gb|EEL32048.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228683999|gb|EEL37947.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228706729|gb|EEL58937.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 495

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 260 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMHEESMRLRDHGEEELSHYSNATTDIEFKFP 319

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 320 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 379

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 380 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 436

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 437 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 494


>gi|241678425|ref|XP_002412596.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215506398|gb|EEC15892.1| threonyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 692

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N ++D I+  Y   GF  + TP + Y+  L             +FS  D +
Sbjct: 316 FQPNGAYIYNTLVDMIKAEYNKRGFQEVVTPNM-YNSKLWLTSGHWQHYQDNMFSF-DVE 373

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 374 KETFALKPMNCPG 386


>gi|148675291|gb|EDL07238.1| threonyl-tRNA synthetase-like 2, isoform CRA_a [Mus musculus]
          Length = 365

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + Y+  L +        +  +F+  D +
Sbjct: 181 FLPRGAFIYNALMDFIREEYHKRNFTEVLSPNM-YNSKLWETSGHWQHYSNNMFTF-DVE 238

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 239 KDTFALKPMNCPGHCLMFAHR 259


>gi|319426373|gb|ADV54447.1| threonyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 642

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/199 (8%), Positives = 57/199 (28%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+    + +  +++        +   +   +                 +       
Sbjct: 314 SEAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   ++  +               +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVQEEVSACI--------QMVYDTYSTFGFENIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++ +  +  RA + L +
Sbjct: 425 EKRIGDDAMWDRAEEALKQ 443



 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  M+         Q   +  +  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLAPMQVVVMNITDKQADYVQEIVKFFKEQGIRASFDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E     + ++       +       E +      QI++   +L+  
Sbjct: 595 VVGDQEMENKEVAVR---TRDGIDLGKMRLEDFATKIHQQISLRSLKLLEE 642


>gi|110638045|ref|YP_678253.1| threonyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123354610|sp|Q11UK3|SYT_CYTH3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|110280726|gb|ABG58912.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 645

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 3/78 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS- 72
           G      K   +R R+ + ++      G+ P+ TP +             D+  K  F  
Sbjct: 262 GLPLWLPKGALLRERLENFLKKAQVRAGYQPVVTPHIGNKQLYVTS-GHFDKYGKDSFQP 320

Query: 73  -LQDDDGQWISLRYDLTA 89
                +G+   L+     
Sbjct: 321 IFTPHEGEQFLLKPMNCP 338



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 34/111 (30%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++ +  +           I  +          Q   
Sbjct: 509 NQKHRPVMLHRAPFGSLERFIAVLIEHVAGNFPLWLSPDQ--IAILPISEKFNDYAQDVY 566

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             L    IR  +     +  G +++  + +  P  ++ G  E + G + I+
Sbjct: 567 DRLLVKDIRGFID-NRDEKIGKKIRDTEVKKVPFMLVIGEKEVNEGKIAIR 616


>gi|330995811|ref|ZP_08319708.1| proline--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329574541|gb|EGG56106.1| proline--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 493

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 69/235 (29%), Gaps = 17/235 (7%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+        L V ++   +         + S   R          EA+
Sbjct: 173 WQEGHTAHATREEAEERAKQMLKVYADFAEQYMAVPVVQGVKSETERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G   G       +++               +RL+ AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFGKAFNVQFINKDNKLEYAWATSWGVSTRLMGALIMTHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  +++ L     K +     LR  GI  +     +K  G   
Sbjct: 293 GLVLPPKLAPIQVVIVPIYKNAEQLKAIDEKVEGIVARLRALGISVKYDNADNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           K+AD   +  P+ ++ G  +     +++      ++ +R     E + +  + +I
Sbjct: 351 KFADYELKGVPVRLVMGGRDLENNTVEVMRRDTLEKETRTCDGIEDYVKTLLDEI 405


>gi|160931282|ref|ZP_02078683.1| hypothetical protein CLOLEP_00119 [Clostridium leptum DSM 753]
 gi|156869760|gb|EDO63132.1| hypothetical protein CLOLEP_00119 [Clostridium leptum DSM 753]
          Length = 450

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/237 (7%), Positives = 60/237 (25%), Gaps = 9/237 (3%)

Query: 240 MVSFLSIDLE-KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           +  F   D + +  +   +  K  +       E + + +  ++     ++       +  
Sbjct: 214 LEFFCKPDTDLEWFYYWKDYCKNWLLSLGIKEENMRLRDHEKEELSFYSKATTDIEYLFP 273

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +           + +   +                  +      ++ A   ++     
Sbjct: 274 FGWGELWGIADRTNYDLKQHQDHSGKSLEYFDPSDNTRYIPYVVEPSLGADRVALAFLCE 333

Query: 359 IVALKSLESS-----TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
               + +         +    + P     +          +    ML+    R  +    
Sbjct: 334 AYDEEEVGEKDTRVVMHLHPALAPYKCAVLPLSKKLNENAEKVYHMLQK---RFMVEYDD 390

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           + + G + +  D    P  +       + G + ++D     +    I     + EA+
Sbjct: 391 AGSIGKRYRRQDEIGTPFCLTYDFDSETDGCVTVRDRDTMAQERVAIDKLAEYIEAK 447


>gi|52628042|gb|AAU26783.1| prolyl-tRNA synthase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 589

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 49/162 (30%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R          +  P ++ ++ L +     +  
Sbjct: 51  MIRKLGSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAE-LWQETGRWETF 109

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              + +++D + +         ++   + R   +++  +          +R     R   
Sbjct: 110 GGQLLTMKDSNQREYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRFGV 169

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F             S +    +M        + +G+K
Sbjct: 170 MRAREFIMKDAYSFHLSLESLQETYKDMYQAYCRIFDRMGLK 211


>gi|323493467|ref|ZP_08098589.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312290|gb|EGA65432.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 642

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 38/348 (10%), Positives = 88/348 (25%), Gaps = 7/348 (2%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      A+ +     +  DY +   N      I  +      D       
Sbjct: 299 IMDRVLWERSGHWDKYAEAMFTTSSENRDYALKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E    +              +
Sbjct: 359 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQDEVTSCIKMVYDTYQTFGFDNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    +  I        G  Y     +        
Sbjct: 418 VVKLSTRPEKRVGSDEIWDQSEEALKQSLEAMDIPYEIQEGEGAFYGPKIEFTLHDCLDR 477

Query: 316 MNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
             +              G    D    R     +           + + ++         
Sbjct: 478 AWQCGTVQLDFNLPGRLGATYVDENNERQVPVMIHRAILGSLERFIGILIEEYYGFFPTW 537

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                     M+         Q   Q L+  GIRA+  L  ++  G +++    +  P  
Sbjct: 538 LSPEQA--VIMNITDKQSDYVQEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPFM 594

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++          ++ +  S+ +  ++   + + E
Sbjct: 595 LVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFISYIQDEISSRKLNLEE 642



 Score = 44.1 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 43/152 (28%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFVREKLTEYGYQEVKGPLIMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +  +L+        +   +   +                 +       
Sbjct: 315 AEAMFT-TSSENRDYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   +   ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQDEVTSCIKMV 405


>gi|282857874|ref|ZP_06267080.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Pyramidobacter piscolens W5455]
 gi|282584256|gb|EFB89618.1| tRNA synthetase class II core domain (G, H, P, S and T) protein
           [Pyramidobacter piscolens W5455]
          Length = 377

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 82/223 (36%), Gaps = 15/223 (6%)

Query: 50  LEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
            E  D   +    +   +  V +  D +G+ ++L+ D+T  + R++    D      + +
Sbjct: 35  FEEYDLYVRNK--DFLVSDSVITFTDTNGRLMALKPDVTLSIIRHI---KDEPGVVQKLF 89

Query: 110 RIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGI 169
               V+R  +     F++ +Q  ++ VG+       E+ M+ A++L  +           
Sbjct: 90  YNENVYRVSQ-KTRTFKEIMQVGLECVGAIDAYCIGEVLMLAAESLRCI-------SPRC 141

Query: 170 NNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLL--LGEGRTDNSGDFT 227
                  GI+  I        + R  VL+ I++ +   L  +     + E +        
Sbjct: 142 VLDVAHLGIIAAIIDDFSFSESVRRAVLKCINEKNVHELSLICAQSGVEENKAAALRRLV 201

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFN 270
              +  +  +  + + LS      + E  + ++  +   KG +
Sbjct: 202 SLCDRPAAAMPKLRALLSRSGSARLAEQLDELERIVVQFKGTD 244


>gi|229020149|ref|ZP_04176925.1| Glycyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|228741158|gb|EEL91380.1| Glycyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 455

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 220 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFRFP 279

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 280 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 339

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 340 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 396

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 397 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 454


>gi|26346052|dbj|BAC36677.1| unnamed protein product [Mus musculus]
 gi|123235428|emb|CAM24690.1| eukaryotic translation initiation factor 2 alpha kinase 4 [Mus
           musculus]
          Length = 347

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 19/79 (24%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS----- 72
              +  +I+  + ++I  +++ +G   + TPLL     L +        N+ ++      
Sbjct: 254 FLIRTAKIQQLVCETIVRVFKRHGAVQLCTPLL-----LPR--------NRQIYEHNEAA 300

Query: 73  -LQDDDGQWISLRYDLTAP 90
              D  G  + L +DL   
Sbjct: 301 LFMDHSGMLVMLPFDLRVS 319


>gi|161723258|ref|YP_094730.2| prolyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|114152207|sp|Q5ZXN7|SYP_LEGPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 569

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 49/162 (30%), Gaps = 8/162 (4%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +R+  ++ + +R          +  P ++ ++ L +     +  
Sbjct: 31  MIRKLGSGLYTWMPLGLRVLRKVENIVREEMNKTHAMELLMPSVQPAE-LWQETGRWETF 89

Query: 67  NKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIV----FPCRTYRIGPVFRNEK 119
              + +++D + +         ++   + R   +++  +          +R     R   
Sbjct: 90  GGQLLTMKDSNQREYCFGPTHEEVITDIMRNELQSYKQLPVNFYQIQTKFRDEIRPRFGV 149

Query: 120 HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                F             S +    +M        + +G+K
Sbjct: 150 MRAREFIMKDAYSFHLSLESLQETYKDMYQAYCRIFDRMGLK 191


>gi|319947863|ref|ZP_08022050.1| glycyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438469|gb|EFV93402.1| glycyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 464

 Score = 45.6 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      +     ++  G + +  D    P  I      
Sbjct: 373 VLPLSRNADLSPKARDLAAQLRK-NWNVDFD--DAQAIGRRYRRHDEIGTPFCITVDFDT 429

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++     +    I   E +   R
Sbjct: 430 LEDQAVTIRERDTMAQERVAIDQVEGYLAQR 460


>gi|318079886|ref|ZP_07987218.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 368

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 27/78 (34%), Gaps = 5/78 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIR--NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G          +R+ + + +R   + +  G+  + +P+L   +   +           +F
Sbjct: 31  GLPYLLPDGASVRHALEEYVRGLEVAD--GYQHVHSPVLGKQELYVRS-GHWAHYRADMF 87

Query: 72  SLQDDDGQWISLRYDLTA 89
              +  G+   LR  L  
Sbjct: 88  PPMEVGGEHFVLRPSLCP 105


>gi|318061953|ref|ZP_07980674.1| threonyl-tRNA synthetase [Streptomyces sp. SA3_actG]
          Length = 407

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 27/78 (34%), Gaps = 5/78 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIR--NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G          +R+ + + +R   + +  G+  + +P+L   +   +           +F
Sbjct: 31  GLPYLLPDGASVRHALEEYVRGLEVAD--GYQHVHSPVLGKQELYVRS-GHWAHYRADMF 87

Query: 72  SLQDDDGQWISLRYDLTA 89
              +  G+   LR  L  
Sbjct: 88  PPMEVGGEHFVLRPSLCP 105



 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +     + + +  R AG+RA  +   +     +++ A     P   + G  E + G + 
Sbjct: 321 EEQEEAAESFVRRCRAAGLRARRYPAHAGTLAARVRQARL--VPHLAVLGAREAAAGEVA 378

Query: 447 IKDLAKGKELSREIK 461
           ++    G+ L    +
Sbjct: 379 LR-RRDGERLPARPE 392


>gi|306832697|ref|ZP_07465834.1| proline--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425153|gb|EFM28282.1| proline--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 618

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKAIMREEFEKIGAVEMLAPALLNAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIG 112
           ++ D     L    + T   L R   +++  +       +  
Sbjct: 97  KNRDKSDFILGPTHEETFTSLVRDAVKSYKQLPLNLYQIQSK 138



 Score = 43.7 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      +IT    D ++ +        L   G    +   + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHVITVNVKDEEAQALTAKVEAELVAKGYEVLVDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G++++K  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AADGIVEVKIKATGDTIEVNAENLIETLEILTKE 617


>gi|302518216|ref|ZP_07270558.1| LOW QUALITY PROTEIN: threonyl-tRNA synthetase [Streptomyces sp.
           SPB78]
 gi|302427111|gb|EFK98926.1| LOW QUALITY PROTEIN: threonyl-tRNA synthetase [Streptomyces sp.
           SPB78]
          Length = 448

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 27/78 (34%), Gaps = 5/78 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIR--NIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G          +R+ + + +R   + +  G+  + +P+L   +   +           +F
Sbjct: 31  GLPYLLPDGASVRHALEEYVRGLEVAD--GYQHVHSPVLGKQELYVRS-GHWAHYRADMF 87

Query: 72  SLQDDDGQWISLRYDLTA 89
              +  G+   LR  L  
Sbjct: 88  PPMEVGGEHFVLRPSLCP 105


>gi|290957102|ref|YP_003488284.1| class II tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260646628|emb|CBG69725.1| putative class II tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 471

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/288 (9%), Positives = 74/288 (25%), Gaps = 47/288 (16%)

Query: 208 LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK 267
              ++  L    ++        A+ T ++     + +   + +        +      + 
Sbjct: 142 RWELRPRLFLRTSEFLWQEGHTAHATYDEARDFAAHIHRQVYEDFMVNVLAMDVVPGRKT 201

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
                      +   G   +   +       L       +                    
Sbjct: 202 VKERFAGALNTLTLEGMMGDGKALQMATSHELGQNFARAFNTRYLSK------------- 248

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
                           Q    +   +  + +++                 V++  +  D 
Sbjct: 249 --------DGSQELVWQTSWGSTTRMIGALVMMHGDDHGLRVPPRLAQTQVVVLAIKDDE 300

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA---DRRNCPLAIIQGTGERSRGM 444
             L+K +     L+ AG+R  +   +   FG   + A   + +  P+ +  G  +   G 
Sbjct: 301 AVLAKVRELGDRLKAAGVRVRVDDRTDVPFG---RRAVDWELKGVPVRVEVGPRDLENGT 357

Query: 445 LQ-IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
              ++ ++ GKE                    +    LV+ +  +L+E
Sbjct: 358 AMLVRRISGGKE-------------------PVAFDALVARLPALLEE 386


>gi|238854745|ref|ZP_04645075.1| proline--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260663977|ref|ZP_05864830.1| prolyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932864|ref|ZP_06338261.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472268|ref|ZP_07812760.1| proline--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832535|gb|EEQ24842.1| proline--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529664|gb|EEQ68665.1| proline--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561863|gb|EEX27832.1| prolyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281302899|gb|EFA95104.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 565

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    I    +      +  P L  + +L +      +    +F L
Sbjct: 38  GVYSYLPLGYRVLRKAERIIEEEMDRINVPEMIMPHLLPA-TLWQESGRYYKYGDEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           +D  G+   L    + T      +A+N  +             
Sbjct: 97  KDRHGRDSLLGPTHEET--FTEIIAKNLKSYKQMPLALYQIQT 137


>gi|254171909|ref|ZP_04878585.1| prolyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033805|gb|EEB74631.1| prolyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 483

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 74/258 (28%), Gaps = 37/258 (14%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             E +         E+   E + I + + K       I       +    +     E ++
Sbjct: 160 FFEAHTAHADFEDAERQIKEDLEIFDRLAKFLALPYIISKRPDWDKFPGAFYSLGAEIMM 219

Query: 312 GFPVMNEKQKPVVFGSVGGGG---RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                 +      +          +Y+      +  +    G S  +   ++A+   +S 
Sbjct: 220 PDGRTLQIGTMHNYKQNFAKAYNIQYETETGDHEYAHQTTFGMSERLLAAVIAVHGDDSG 279

Query: 369 TNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRA---EMFLGSSKNFGNQ 420
                 + P+ +  +     D + D  +  +   + LR AG R    E  +   +     
Sbjct: 280 MVLPPTIAPIQVVIVPIPKKDANVDVFAYAREIAEELRKAGFRVHVDERDIRPGR----- 334

Query: 421 LKYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            KY D   +  PL I  G  +       +                   R     ++T+  
Sbjct: 335 -KYYDWELKGVPLRIEVGPRDVEGRKAVL------------------ARRDTFEKVTVER 375

Query: 479 SELVSTVKKILQENKEEI 496
             +V  VKK L    E +
Sbjct: 376 DAIVEEVKKTLDAIHENL 393



 Score = 40.6 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 4/79 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        ++I   I   IR   E  G + +  P L       K           V
Sbjct: 32  PVKGMNVWLPYGLKIMRNIEAFIRAEMERTGHEEVLFPALIPETEFQKEAEHIKGFEDEV 91

Query: 71  FSLQ----DDDGQWISLRY 85
           + +     D     + LR 
Sbjct: 92  YWVTHAGLDPLDVRLILRP 110


>gi|15597940|ref|NP_251434.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|116050734|ref|YP_790445.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218891076|ref|YP_002439942.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254241197|ref|ZP_04934519.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|313107813|ref|ZP_07793987.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|22654141|sp|Q9I099|SYT_PSEAE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|122259859|sp|Q02NP1|SYT_PSEAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226701406|sp|B7V188|SYT_PSEA8 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|9948822|gb|AAG06132.1|AE004702_9 threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|115585955|gb|ABJ11970.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126194575|gb|EAZ58638.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218771301|emb|CAW27066.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|310880489|gb|EFQ39083.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 640

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 9/142 (6%), Positives = 36/142 (25%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +  ++G+  + TP +     L +         + +F+ 
Sbjct: 261 GMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDR-ILWERSGHWSNYAENMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +  +  +++        +   +   +                 +              
Sbjct: 320 SSES-RDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + ++    AD +
Sbjct: 379 TQDDAHIFCTEEQVKKEAADFI 400



 Score = 43.7 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 68/230 (29%), Gaps = 4/230 (1%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    ++   +    A   G +EL   +E   
Sbjct: 381 DDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSDELWDRAEGAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
               N + +        G  Y     +  +      N +   + +            ++ 
Sbjct: 441 ADALNESGLAWEYQPGEGAFYGPKIEF-TLKDCLGRNWQCGTLQYDPNLPERLDASYIAE 499

Query: 341 FKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +  P       +G     + +     +      + P     M+             +
Sbjct: 500 DNNRKRPVMLHRAILGSFERFIGMLIEHYAGAFPAWLAPTQAVVMNITDKQADFAAEVVR 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 560 ILGESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVESKAVAVR 608


>gi|320165002|gb|EFW41901.1| Tarsl2 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 777

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 59/459 (12%), Positives = 123/459 (26%), Gaps = 60/459 (13%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      ++I +R+ + IR  Y +YG+  + TP++ YS  L +         + +F++
Sbjct: 346 GSAFMLPHGMKIISRLQEYIRLAYIHYGYQEVSTPIV-YSKELWETSGHLQHYAQDMFAV 404

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
               G        LT                P                            
Sbjct: 405 T--GG--------LT----------------PAAPAAGAAAGAAGHSHHHADSDASSDAT 438

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI--GINNRKILDGILEKIGLHGDDKLN 191
             +          +      +   + I+  D+        +  L G+      H DD   
Sbjct: 439 QALKPMNCPGHCLIFQRKHYSYRELPIRLADFSPLHRNEAKGALSGLTRVRRFHQDDAHI 498

Query: 192 ERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANL----TSEQIDIMVSFLSID 247
                    + L+  G   V+ + G                    + EQ D   S L   
Sbjct: 499 FCTPEQIQAEILNVLGF--VREVYGRLGFSEFTLKLSTRPESFVGSIEQWDYAESCLKDA 556

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI---SSTIVRGLEYYTG 304
           L+++    + L  G  A      ++ +   + R+    + ++         +R  +    
Sbjct: 557 LQQTCGSNWTLNPGDGAFYGPKIDITIRDAIGRQHQTATVQLDFQLPQRFGLRYFDANQQ 616

Query: 305 CVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                ++   V+   ++          GR+   +S  +                    K 
Sbjct: 617 AHTPVMIHRAVLGSLERMFAILIENTAGRWPLWLSPRQVAVCSVDPSV--NEYAAEVCKQ 674

Query: 365 LESST-------NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNF 417
           LE  +         +K       +    +  S +        L            S    
Sbjct: 675 LEKVSLRLPGSVFEVKNNVTTDSSAATPNGSSSAFALQVEADL------------SDNRL 722

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
             +++ A        ++ G  E +   L ++D   G +L
Sbjct: 723 SKKIRDAQVSQFNYIVVTGAREAADRTLNVRD-RTGAQL 760


>gi|317506992|ref|ZP_07964761.1| threonyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254750|gb|EFV14051.1| threonyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 683

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 3/103 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY-ADRRNCPLA 432
            + PV    +    D +   + +   LR  G+RA +     +       + A +   P  
Sbjct: 570 WLSPVQAMGIPVSDDHVPHLRAFVDSLRAGGVRAHLDTSDDRMQKKIFTHTAQK--IPFL 627

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  +   G +  +    G+  +  +   +      VA+  
Sbjct: 628 VLAGARDVEAGTVSFRFRDGGQRNAVPVDEAKRLVLDWVARRE 670


>gi|307566163|ref|ZP_07628618.1| glycine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345128|gb|EFN90510.1| glycine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 517

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/233 (8%), Positives = 44/233 (18%), Gaps = 29/233 (12%)

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP------VMNEKQKPVVFGS 327
                    G      +                 E  L F       + +     +    
Sbjct: 288 HRLAWHEGLGMGDENYRFHDHDKLAHYANAATDIEFHLPFGFKEIEGIHSRTNFDLSQHE 347

Query: 328 VGGGGR--YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST-------------NNI 372
              G +  Y                        +  +                       
Sbjct: 348 KFSGRQIKYFDPELNENYTPYVVETSIGVDRMFLSVMCHAYQEEKLDNGSSRIVLKLPEP 407

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  +  + +      K Q     L          + +  + G + +  D    P  
Sbjct: 408 LAPIKCAVLPLVNKDGLPEKAQEIVNDL---KFHFTTHMEAKDSIGKRYRRQDAIGTPFC 464

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           +       S G + ++     ++    I       E R     + I+ L+  +
Sbjct: 465 VTVDGNTLSEGTVTLRYRDTMEQERVPISKLREIIEDR-----VSITSLLKKI 512


>gi|288904427|ref|YP_003429648.1| prolyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306830460|ref|ZP_07463630.1| proline--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325977424|ref|YP_004287140.1| prolyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731152|emb|CBI12700.1| prolyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304427485|gb|EFM30587.1| proline--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177352|emb|CBZ47396.1| proS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 618

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKAIMREEFEKIGAVEMLAPALLNAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIG 112
           ++ D     L    + T   L R   +++  +       +  
Sbjct: 97  KNRDKSDFILGPTHEETFTSLVRDAVKSYKQLPLNLYQIQSK 138



 Score = 43.7 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      +IT    D ++ +        L   G    +   + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHVITVNVKDEEAQALTAKVEAELVAKGYEVLVDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G++++K  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AADGIVEVKIKATGDTIEVNAENLIETLEILTKE 617


>gi|229175609|ref|ZP_04303118.1| Glycyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228607867|gb|EEK65180.1| Glycyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 458

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 223 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFRFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|225874389|ref|YP_002755848.1| proline--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|254782879|sp|C1F3P3|SYP_ACIC5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225793232|gb|ACO33322.1| proline--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 585

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 65/259 (25%), Gaps = 21/259 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R  N+I+  +R   +  G      P +  +D L +           +F L
Sbjct: 39  GIYSYLLFGQRSINKIVGIVREEMDKIG-QEFLLPAIHPAD-LWRESGRWTVMGDNMFRL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGR------ 124
           +D  G  + L     ++   +AR       +     + +        ++  P        
Sbjct: 97  KDRKGAELCLGMTHEEVMTDIAR---NELRSYKQLPQIWYQIQNKFRDEPRPRSGLLRVR 153

Query: 125 ---FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
               +     D++  G        +       T   +     +   G          +  
Sbjct: 154 QFLMKDSYSFDLNQAGLDKSYDLHDAAYRAIFTRCGLNFVVVEADSGAMGGSGSQEFMVY 213

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                D   +       A  +     L  V+ L      D   +           I  + 
Sbjct: 214 TDAGEDLIASCAKCGYAANMEKATSKLAPVEEL--AATGDGQPELISTPG--QAAIADIC 269

Query: 242 SFLSIDLEKSMHELYELVK 260
            FL +     +  +  + +
Sbjct: 270 KFLGMQPHSDIKCVAYMAE 288


>gi|213961830|ref|ZP_03390096.1| prolyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213955619|gb|EEB66935.1| prolyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 492

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/248 (11%), Positives = 69/248 (27%), Gaps = 27/248 (10%)

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                      A E+    + V +  V           + +   R          EA++ 
Sbjct: 173 EGHTAHATKAEALEEAEKMMNVYATFVENFMAVPVIKGLKTESERFAGADETFCIEAMMQ 232

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLES 367
                +       G            ++   Q           +RL+ AL          
Sbjct: 233 DGKALQAGTSHFLGQNFAKAFEVKYATKEGKQEYVWASSWGVSTRLMGALIMTHSDDNGL 292

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKY----QMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                     V+I  +    + L K     Q   + L+  GI  +     +++ G +   
Sbjct: 293 VLPPKLAPIQVVIVPIYKGEEQLEKVRTHIQPLVEELKKRGISVKFDDRDTQSPGFKFHE 352

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  P+ +  G  +      ++                   R   + + T+   ++V+
Sbjct: 353 YELKGVPVRLAVGQRDIENNTFEV------------------ARRDTLTKETVTGDQIVA 394

Query: 484 TVKKILQE 491
            ++++L++
Sbjct: 395 HIQQLLED 402


>gi|300176086|emb|CBK23397.2| Prolyl-tRNA synthetase [Blastocystis hominis]
          Length = 546

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 43/110 (39%), Gaps = 9/110 (8%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                  +   + LR AG+R E+    + N G +    +++  PL I  G  +     + 
Sbjct: 349 DRLRRAARDLGERLRAAGLRVEVDSRENYNPGWKFADWEQKGVPLRIELGPRDLDAQQVV 408

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK-KILQENKEE 495
               A+  +L+   K   +W +           E + T++  +L++ + E
Sbjct: 409 F---ARRDDLTPAGKRTVAWEKIEEEAR-----EALETIQAALLEKARRE 450


>gi|152988735|ref|YP_001347870.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166225481|sp|A6V485|SYT_PSEA7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150963893|gb|ABR85918.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 640

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 9/142 (6%), Positives = 36/142 (25%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +  ++G+  + TP +     L +         + +F+ 
Sbjct: 261 GMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDR-ILWERSGHWSNYAENMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +  +  +++        +   +   +                 +              
Sbjct: 320 ASES-RDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + ++    AD +
Sbjct: 379 TQDDAHIFCTEEQVKKEAADFI 400



 Score = 43.7 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 68/230 (29%), Gaps = 4/230 (1%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    ++   +    A   G +EL   +E   
Sbjct: 381 DDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSDELWDRAEGAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
               N + +        G  Y     +  +      N +   + +            ++ 
Sbjct: 441 ADALNESGLAWEYQPGEGAFYGPKIEF-TLKDCLGRNWQCGTLQYDPNLPERLDASYIAE 499

Query: 341 FKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +  P       +G     + +     +      + P     M+             +
Sbjct: 500 DNNRKRPVMLHRAILGSFERFIGMLIEHYAGAFPAWLAPTQAVVMNITDKQADFAAEVVR 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 560 ILGESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVESKAVAVR 608


>gi|91229885|ref|ZP_01262956.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91187354|gb|EAS73721.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 208

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 40/100 (40%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+         Q   Q L+ +GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 110 VLMNITDKQSGYVQEIVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVPYMLVVGDQEM 168

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  ++ +  ++   + + E
Sbjct: 169 EAGEIAVRTRKGKDLGKFKVDDFIAYIQDEISSRKLNLEE 208


>gi|296388793|ref|ZP_06878268.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 640

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 9/142 (6%), Positives = 36/142 (25%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +  ++G+  + TP +     L +         + +F+ 
Sbjct: 261 GMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDR-ILWERSGHWSNYAENMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +  +  +++        +   +   +                 +              
Sbjct: 320 SSES-RDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + ++    AD +
Sbjct: 379 TQDDAHIFCTEEQVKKEAADFI 400



 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 68/230 (29%), Gaps = 4/230 (1%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    ++   +    A   G +EL   +E   
Sbjct: 381 DDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSDELWDRAEGAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
               N + +        G  Y     +  +      N +   + +            ++ 
Sbjct: 441 ADALNESGLAWEYQPGEGAFYGPKIEF-TLKDCLGRNWQCGTLQYDPNLPERLDASYIAE 499

Query: 341 FKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +  P       +G     + +     +      + P     M+             +
Sbjct: 500 DNNRKRPVMLHRAILGSFERFIGMLIEHYAGAFPAWLAPTQAVVMNITDKQADFAAEVVR 559

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           ML  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 560 MLGESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVESKAVAVR 608


>gi|268317819|ref|YP_003291538.1| prolyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262335353|gb|ACY49150.1| prolyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 496

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 31/245 (12%)

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            A E+    L + +    +         + +   R          EA++      +    
Sbjct: 181 EAIEEALRILDIYTTFAEEYMAMPVIQGVKTPSERFAGAVDTYCIEALMQDGRALQAGTS 240

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGP 377
              G            ++               +RLI AL                    
Sbjct: 241 HFLGQNFAKAFDCKFQNQNNELEYVWATSWGVSTRLIGALVMTHSDDQGLVLPPRLAPTQ 300

Query: 378 VLITTM----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           V+I  +       S  L +     + L+ AG   ++    +   G +    + +  P+ +
Sbjct: 301 VVIIPIFRNDVEKSAVLEQAGRIERELKDAGFTVKLDARETHRPGWKFNEYEVQGVPVRV 360

Query: 434 IQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             G  +  +G +++  +D    +                    T+P   L   V+ +L +
Sbjct: 361 AIGPRDVEQGTVELARRDTRTKE--------------------TVPQEGLAERVRTLLDD 400

Query: 492 NKEEI 496
            ++ +
Sbjct: 401 IQQNL 405


>gi|219117560|ref|XP_002179573.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408626|gb|EEC48559.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 602

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/173 (10%), Positives = 49/173 (28%), Gaps = 11/173 (6%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           EA   F          V          +  +      ++      + +     A   +  
Sbjct: 431 EAFRAFLNSYAICFNSVGLEYYDEQTKEKYIPHCIEPSLGVDRLMLALICSAYAEDEVGG 490

Query: 368 STNN----IKEMGPVLITTMD---HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
              +      ++ P+ +  +    +  + +S  +     LR      +    ++   G +
Sbjct: 491 EKRSLLKFDPKIAPIKVAVLPLLKNKEELVSVARDLFDKLRRR-WNCQ--YDAAGAIGRR 547

Query: 421 LKYADRRNCPLAIIQGTGERS-RGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + AD    P  +            + I+D     ++   +K+  S+   R+ 
Sbjct: 548 YRRADEVGTPYCVTIDFDTIETDNAVTIRDRDTTDQVRIPLKDVISYLSERID 600


>gi|283458533|ref|YP_003363161.1| glycyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134576|dbj|BAI65341.1| glycyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 502

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +   ++           LR  G+   +    +   G + +  D    P  I      
Sbjct: 412 VLPLSKKAELSEPATKLANELR--GLW-NVDYDEAGAIGRRYRRQDEIGTPFCITVDFDT 468

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                + I++     +    +   +S+  AR+A
Sbjct: 469 LEDQAVTIRERDTMNQERVALDQVKSYLAARLA 501


>gi|323669590|ref|NP_001191177.1| bifunctional aminoacyl-tRNA synthetase [Danio rerio]
          Length = 1511

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 64/202 (31%), Gaps = 25/202 (12%)

Query: 297  RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
              L      ++E +   P    +++     S G              + +       G +
Sbjct: 1241 HHLGQNFSRMFEIVFEDPKKPGEKQLAYQNSWG-----------ITTRTIGVLTMVHGDN 1289

Query: 357  RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
              +V    +      I   G             L +   Y   L+ A IR +  L  + +
Sbjct: 1290 MGLVLPPRVACLQVIIIPCGITATLPEAEKDLLLDQCSKYLSRLQKADIRVKADLRDNYS 1349

Query: 417  FGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +  + + +  P+    G  +  +G  + ++    G++++ +  + E           
Sbjct: 1350 PGWKFNHWELKGVPIRFEVGPKDLKQGQFVAVR-RDTGEKITVKEADAEK---------- 1398

Query: 476  IPISELVSTVK-KILQENKEEI 496
              I  L+  ++  + +   +++
Sbjct: 1399 -KIPNLLEEIQNNLFKRASDDL 1419


>gi|167752565|ref|ZP_02424692.1| hypothetical protein ALIPUT_00818 [Alistipes putredinis DSM 17216]
 gi|167659634|gb|EDS03764.1| hypothetical protein ALIPUT_00818 [Alistipes putredinis DSM 17216]
          Length = 494

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 73/257 (28%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    + V  + V +       +   S   R          EA+
Sbjct: 173 WQEGHTAHATKEEAIEEATRMIHVYQKFVEEWMGVPVIVGHKSPNERFAGAVDTLTIEAL 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           +++               +RL+ AL      + 
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKAFDVQYINKEGKLEYVWATSWGVSTRLMGALIMAHSDNN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V++  +    + + +         + L++ G+  ++      N  +  
Sbjct: 293 GLVLPPKLAPIQVVLIPIYKGEEQMRQIVERLRTIAEELKSKGLSVKIDDRD--NVRSGF 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+A+   +  P+ +  G  +   G +++                   R   + + T+P  
Sbjct: 351 KFAEYELKGVPVRLALGPRDLENGTIEL------------------VRRDTLEKETVPQE 392

Query: 480 ELVSTVKKILQENKEEI 496
            L   V  ++ E ++ I
Sbjct: 393 GLTDRVAALMDEIQQNI 409


>gi|92117217|ref|YP_576946.1| threonyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800111|gb|ABE62486.1| Ser-tRNA(Thr) hydrolase [Nitrobacter hamburgensis X14]
          Length = 681

 Score = 45.6 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 49/179 (27%), Gaps = 8/179 (4%)

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRY-----DGLVSRFKGQNVPATGFSIGISRLIVA 361
           +E +L   +  E Q            R+     D   ++     V             + 
Sbjct: 503 FEYVLRDAIGREWQCGTTQVDFNLPERFGAFYIDEHSNKVAPVMVHRAICGSLERFAGIL 562

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           ++               ++ T+  D+D     +      R AG+R E+ L  ++    ++
Sbjct: 563 IEHFAGHFPLWLAPVQAVVATITSDAD--DYAREVVAAARRAGLRIEIDL-RNEKINYKV 619

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           +       P  ++ G  E     + I+ L    +         +          I    
Sbjct: 620 REHSLAKVPALLVVGKKEAESRSVSIRRLGSDGQTVLPTDEAIAALVEEATPPDIKREN 678


>gi|295698550|ref|YP_003603205.1| prolyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157056|gb|ADD79501.1| prolyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 583

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  +L  G        +++  ++   IR   ++ G     +PL++    L K     D+ 
Sbjct: 31  MIRKLSSGIYYWLPTGVKVIEKLKSIIRKEMDSIGLIEFSSPLIQPMK-LWKKSGRLDQY 89

Query: 67  NKGVFSLQDDDGQWISLRY 85
            + +F + D   +   L  
Sbjct: 90  GEELFRINDRKSRPFILSP 108


>gi|253681235|ref|ZP_04862033.1| glycine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562473|gb|EES91924.1| glycine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 463

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/216 (6%), Positives = 50/216 (23%), Gaps = 8/216 (3%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +  H   +     +       E +   +   +     +        +    +        
Sbjct: 238 EWFHYWKDYCWKFLLDLGMTEENLRFRDHGEEELSFYSNATSDIEFLFPFGWGELWGIAD 297

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
              + +    +      +       +  V      ++ A   ++         + LE+  
Sbjct: 298 RTDYDLKKHMEHSGQELTYLDPTTNEKYVPYVIEPSLGADRVALAFLVDAYDEEELENGD 357

Query: 370 -----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                +    + P     +        K       L +      +    + + G + +  
Sbjct: 358 TRTVLHLHPALAPFKAAILPLSKKLSEKALEVYGKL-SKKFN--IDYDEAGSIGKRYRRE 414

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           D    P  I           + ++D     ++  +I
Sbjct: 415 DEIGTPYCITVDFDTLQDNTVTVRDRDNMTQVRLKI 450


>gi|255720300|ref|XP_002556430.1| KLTH0H13046p [Lachancea thermotolerans]
 gi|238942396|emb|CAR30568.1| KLTH0H13046p [Lachancea thermotolerans]
          Length = 675

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 18/106 (16%)

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
            K +   Q LR + +RA      +   G +    + +  PL +  G  + ++  + +   
Sbjct: 484 QKAREIEQKLRASNVRAFGDYNDNYTPGWKFSQYELKGIPLRLEFGPKDMAQDQVSV--- 540

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           R     + T+  ++L + + +IL+E ++++
Sbjct: 541 ---------------VRRNDNRKYTVKTADLETRIPEILEEMQKDM 571


>gi|229825871|ref|ZP_04451940.1| hypothetical protein GCWU000182_01235 [Abiotrophia defectiva ATCC
           49176]
 gi|229789891|gb|EEP26005.1| hypothetical protein GCWU000182_01235 [Abiotrophia defectiva ATCC
           49176]
          Length = 604

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 77/276 (27%), Gaps = 7/276 (2%)

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV---KGTIAGEKGFNEL 272
            E R D+   F   + +  E  D+M     I     +    EL    +  +   + ++  
Sbjct: 333 QEFRQDDDHTFVMESQIEEEIADVMEVADQIYSTFGITYRAELSTRPEDFMGDIEVWDRA 392

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               + +    Y     +++               +  LG        +           
Sbjct: 393 EAALKKILDKKYGEGGYEVNEGDGAFYGPKIDLQMKDALGREWQCGTIQLDFQLPHNFEL 452

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       K   V          R I  L            + P  +  +   ++    
Sbjct: 453 TYQDSDGTIKEPVVIHRAIFGSFERFIGILIENYKGEFPFW-ISPYQVAIVPIRTEHNEY 511

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L   GIR E      KN   ++K       P  I+ G  E+    + I  +  
Sbjct: 512 AKEIEDALYEMGIRVEANYD-DKNMNEKIKGFKLMKDPYIIVVGDKEKEERTVSI-TVRG 569

Query: 453 GKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            K+    +  +  ++  R  Q T    EL+  + +I
Sbjct: 570 QKQQMHGVPLDTFYKMIRKLQDT-KAQELIKDISEI 604



 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 1/62 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           E   G      +  R+   +++  R I+  +G+  I  P++                   
Sbjct: 198 ETAPGMPYWLPRGWRLYQELINFWRKIHVKHGYQEISAPIINNRKLWL-ISGHWAHYVNN 256

Query: 70  VF 71
           +F
Sbjct: 257 MF 258


>gi|296122745|ref|YP_003630523.1| prolyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015085|gb|ADG68324.1| prolyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 590

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 1/80 (1%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
             +I     V+ T   +D +         + L  AG+   +     +  G + K AD   
Sbjct: 476 PLSIAPYSVVISTIGVNDPEVDEVVNQLEKELTAAGVDLLIDDRDQR-PGVKFKDADLIG 534

Query: 429 CPLAIIQGTGERSRGMLQIK 448
            PL ++ G      G +++K
Sbjct: 535 IPLRVVIGGKGLKEGQVELK 554



 Score = 40.2 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 16/51 (31%)

Query: 10 ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
          +L  G         R   +I   IR   +  G   +  P L+  D   +  
Sbjct: 34 QLMAGAYTYLPLGWRSIRKIEAIIREEMDATGALEMLMPALQPIDLFERTG 84


>gi|73919786|sp|Q83C10|SYT_COXBU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 651

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 40/351 (11%), Positives = 97/351 (27%), Gaps = 7/351 (1%)

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           + +     +  ++    +       D + ++ ++   Y I   +      I  +      
Sbjct: 289 YQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYR 348

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D                   L G+ + L     D++  F     + SE    +     + 
Sbjct: 349 DLPLRYAEFGACHRNEPSGTLHGL-MRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVY 407

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +    E+   +        G +E+   +E       N   ++       G  Y     +
Sbjct: 408 ADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDILPGEGAFYGPKIEF 467

Query: 308 EAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                   + +              G        S+     +           L + L+ 
Sbjct: 468 SLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGILLEE 527

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV +  M+             + L+  GIRA   L  ++  G +++  
Sbjct: 528 SAGKLPLW--LAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDL-RNEKIGFKIREH 584

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
                P  ++ G  E +   L ++ L      +  ++      +A ++Q +
Sbjct: 585 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAEISQRS 635



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            + E P G          I  ++ + IR+I   YG+  + TP L  + SL       ++ 
Sbjct: 255 FQPESP-GNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDA-SLWDKSGHLEKF 312

Query: 67  NKGVFSL 73
              +FSL
Sbjct: 313 GDDIFSL 319


>gi|28209979|ref|NP_780923.1| glycyl-tRNA synthetase [Clostridium tetani E88]
 gi|59798585|sp|Q899G6|SYG_CLOTE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|28202414|gb|AAO34860.1| glycyl-tRNA synthetase [Clostridium tetani E88]
          Length = 463

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 8/64 (12%), Positives = 18/64 (28%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +    +   G + +  D    P  I           + I+D     ++   I     +  
Sbjct: 399 VDYDEAGTIGKRYRREDEIGTPYCITIDYDTLEDNTVTIRDRDSMDQIRINIDELVKYIS 458

Query: 469 ARVA 472
            +V 
Sbjct: 459 EKVE 462


>gi|66819369|ref|XP_643344.1| hypothetical protein DDB_G0276043 [Dictyostelium discoideum AX4]
 gi|74876213|sp|Q75JN1|IFKC_DICDI RecName: Full=Probable serine/threonine-protein kinase ifkC; AltName:
            Full=Initiation factor kinase C
 gi|60471361|gb|EAL69321.1| hypothetical protein DDB_G0276043 [Dictyostelium discoideum AX4]
          Length = 1700

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 26/97 (26%), Gaps = 1/97 (1%)

Query: 370  NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                +     I  +    +   +       L  AG  AE     +     Q   +     
Sbjct: 1591 MIAHKFSTPDIFVISLGPNLFLERIGIVGDLCNAGFNAETMYIENPTPEEQQDASITSGA 1650

Query: 430  PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
               I       ++  +++K++ K +E          +
Sbjct: 1651 LYIITIKEKG-AKKTIKVKNIEKRREDDVSRDEIVKF 1686


>gi|255261967|ref|ZP_05341309.1| ATP phosphoribosyltransferase regulatory subunit [Thalassiobium sp.
           R2A62]
 gi|255104302|gb|EET46976.1| ATP phosphoribosyltransferase regulatory subunit [Thalassiobium sp.
           R2A62]
          Length = 357

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 107/358 (29%), Gaps = 41/358 (11%)

Query: 32  SIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD-DGQWISLRYDLTAP 90
            +   + + G  P+   +L+ + +L     ++ R     ++  D   G+ + LR D T P
Sbjct: 12  RLTQHFLDAGAAPVSADILQPAGTLLDLYGEDIRARA--YTTHDPLRGEQM-LRPDFTVP 68

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
           +   V  +      P R    G VFR +                        ADAE+  +
Sbjct: 69  V---VQMHMTHGADPARYTYQGRVFRQQTDPARATEYLQVGYELFARDDPAAADAEVFAL 125

Query: 151 MADTLEAVGIKRNDYHIGINNRKIL---------DGILEKIGLHGDDKLNERLIVLRAID 201
           + D L  + +      IGI    +L         + +L  I      +        R   
Sbjct: 126 INDALSHLNLTPVTGDIGILMAAVLGLATTDRRKNALLRHIWRPARFRQLLNRFSGRTPA 185

Query: 202 KLDKFGLQGVKLLLGEGR--------------TDNSGDFTKGANLTSEQIDIMVSFLSID 247
              +  L      +                   D   + +    +T +++ ++ + LSI 
Sbjct: 186 PETRVALLEQSDPMAHDFPHIGLRSAAEVSARIDALREDSATPPITGDEVQLIDAILSIR 245

Query: 248 --LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                ++  L  L             L    + +   G N + ++  +   R        
Sbjct: 246 DTAPMALANLKALTSDIPTMAPAVTRLAGRIDALAVRGINVDTLQFETDFGR-------T 298

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALK 363
           + E   GF              +  GGRYD L  +            +    LIV L+
Sbjct: 299 LLEYYDGFVFGFRADPAAA--PIATGGRYDALTRQLGQGAAIPAVGGVIRPGLIVDLE 354


>gi|257068863|ref|YP_003155118.1| glycyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559681|gb|ACU85528.1| glycyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 463

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +      + +       LR      EM +  +   G + +  D    P  +    
Sbjct: 370 VAVLPLSKSEALVPRATELADQLRRH-WNVEMDVTQA--IGRRYRRQDEIGTPFCVTVDF 426

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + I++     +    +   ES+  AR
Sbjct: 427 ETAEDQSVTIRERDSMAQERVALDQVESYLAAR 459


>gi|157813258|gb|ABV81374.1| putative histidyl-tRNA synthetase [Cypridopsis vidua]
          Length = 149

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 54/147 (36%), Gaps = 18/147 (12%)

Query: 139 SAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
             +    ++            ++  ++ I +N+RKILDG+ E  G+  D    +   +  
Sbjct: 2   QYDPMIPDIECAKIVDEILCSLEVGEFSIKVNHRKILDGLFEACGVPAD----KFRSICS 57

Query: 199 AIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL--- 255
           A+DKLDK   + V+            +      L  E  D +  ++ +  +  + E    
Sbjct: 58  AVDKLDKSPWEEVRK-----------EMINEKGLDPEVADKIGEYVKLSGKGDLAEKLLA 106

Query: 256 YELVKGTIAGEKGFNELVVISELVRKS 282
              + G  + ++G   + +  +     
Sbjct: 107 DPALSGNKSAKEGLEAMKLFLQYADIY 133


>gi|317497213|ref|ZP_07955537.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895458|gb|EFV17616.1| prolyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 478

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 58/185 (31%), Gaps = 11/185 (5%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                F     K   + +       +Y    S      +      +      + L     
Sbjct: 231 GTSHNFGDGFAKAFDIQYTDKDNKLQYVHQTSWGMSTRIIGAIIMVHGDDSGLVL----- 285

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I  +  +++  M      L K +   + L  +  + ++   S K+ G +    + R
Sbjct: 286 -PPRIAPVQTMIVPIMQKKEGVLDKAEEIRKRL-ASSYKVKVD-DSDKSPGWKFSEQEVR 342

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P  I  G  +  +    I      +++   +   E+     + Q+    ++++   KK
Sbjct: 343 GIPTRIEIGPKDIEKNQAVIVRRDTREKIIVSLDEIETKLGEVLEQM---QNDMLERAKK 399

Query: 488 ILQEN 492
            L+E+
Sbjct: 400 HLEEH 404


>gi|229026377|ref|ZP_04182734.1| Glycyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228734840|gb|EEL85478.1| Glycyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 487

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 252 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFRFP 311

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 312 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 371

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 372 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 428

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 429 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 486


>gi|118486938|gb|ABK95302.1| unknown [Populus trichocarpa]
          Length = 498

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 75/256 (29%), Gaps = 32/256 (12%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             E        ++   E++ I EL R+       I I       +E + G +Y   +   
Sbjct: 170 WQEGHTAFATKQEADEEVLQILELYRRIYEEFLAIPIIKGKKSEMEKFAGGLYTTSVEAF 229

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSR----------FKGQNVPATGFSIGISRLIVALKS 364
           + N  +      S   G  +  +                QN  A         ++V    
Sbjct: 230 IPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDD 289

Query: 365 LESSTNNIKEMGPVLITTMDHDSDS----LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                        V++  +     +              L  AGIRAE     + + G +
Sbjct: 290 KGLVLPPKVSSVQVIVVPVPFKDANTQGIFDACAATVDTLCEAGIRAEADYRENYSPGWK 349

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             + + +  PL I  G  + +   ++                  + R    A++ I    
Sbjct: 350 YSHWEMKGVPLRIEIGPKDLANNQVR------------------AVRRDNAAKVDISCDN 391

Query: 481 LVSTVKKILQENKEEI 496
           L   VK +L + ++ +
Sbjct: 392 LAEKVKDMLDDIQKSM 407


>gi|312385395|gb|EFR29915.1| hypothetical protein AND_00854 [Anopheles darlingi]
          Length = 1070

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 19/155 (12%)

Query: 348 ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD--------SLSKYQMYTQM 399
                     ++V   +             V+I      +              +   + 
Sbjct: 827 GITTRTIGVMIMVHADNQGLVLPPRVACIQVVIVPCGITATTTDEERRRLYESCRELERS 886

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L  AGIR E     + + G +  + + +  P+ I  G           KDL KG+ ++  
Sbjct: 887 LVGAGIRCEGDYRDNYSPGWKYNHWELKGVPVRIELG----------FKDLQKGECVAVR 936

Query: 460 IKNNESWREARVAQITIPISELVSTVKKILQENKE 494
            ++N +    R  Q T+ + +L+ T+ + +    +
Sbjct: 937 -RDNGTKLTVRREQATVELPKLLETIHESMYAKAD 970


>gi|256851262|ref|ZP_05556651.1| prolyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260660686|ref|ZP_05861601.1| prolyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934730|ref|ZP_06339973.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297206129|ref|ZP_06923524.1| proline--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256616324|gb|EEU21512.1| prolyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548408|gb|EEX24383.1| prolyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301305|gb|EFA93606.1| proline--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149255|gb|EFH29553.1| proline--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 565

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    I    +      +  P L  + +L +      +    +F L
Sbjct: 38  GVYSYLPLGYRVLRKAERIIEEEMDRINVPEMIMPHLLPA-TLWQESGRYYKYGDEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           +D  G+   L    + T      +A+N  +             
Sbjct: 97  KDRHGRDSLLGPTHEET--FTEIIAKNLKSYKQMPLALYQIQT 137


>gi|215919162|ref|NP_820316.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|206584046|gb|AAO90830.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 660

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 40/351 (11%), Positives = 97/351 (27%), Gaps = 7/351 (1%)

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           + +     +  ++    +       D + ++ ++   Y I   +      I  +      
Sbjct: 298 YQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYR 357

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D                   L G+ + L     D++  F     + SE    +     + 
Sbjct: 358 DLPLRYAEFGACHRNEPSGTLHGL-MRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVY 416

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +    E+   +        G +E+   +E       N   ++       G  Y     +
Sbjct: 417 ADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDILPGEGAFYGPKIEF 476

Query: 308 EAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                   + +              G        S+     +           L + L+ 
Sbjct: 477 SLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGILLEE 536

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV +  M+             + L+  GIRA   L  ++  G +++  
Sbjct: 537 SAGKLPLW--LAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDL-RNEKIGFKIREH 593

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
                P  ++ G  E +   L ++ L      +  ++      +A ++Q +
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAEISQRS 644



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            + E P G          I  ++ + IR+I   YG+  + TP L  + SL       ++ 
Sbjct: 264 FQPESP-GNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDA-SLWDKSGHLEKF 321

Query: 67  NKGVFSL 73
              +FSL
Sbjct: 322 GDDIFSL 328


>gi|297817558|ref|XP_002876662.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322500|gb|EFH52921.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS----LSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                          V++  + +   +              L  AGIRAE  L  + + G
Sbjct: 312 DDKGLVLPPKVASVQVVVIPVPYKDANTQGIYDACTATASALCEAGIRAEEDLRDNYSPG 371

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +    + +  PL I  G  +     ++                  + R     +  IP 
Sbjct: 372 WKYSDWEMKGVPLRIEIGPRDLENDQVR------------------TVRRDNGVKEDIPR 413

Query: 479 SELVSTVKKILQENKEEI 496
             LV  VK++L++ ++ +
Sbjct: 414 GSLVENVKELLEKIQQNM 431


>gi|240280652|gb|EER44156.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325089093|gb|EGC42403.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 733

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 4/83 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R+ Y   G+  +++P +   D  + +           +F 
Sbjct: 326 GCPFLLPNGTKIFNALQALLRSEYRKRGYQEVQSPNM--YDVGIWRQSGHWQHYKDDMFK 383

Query: 73  LQDDDGQWISLRYDLTAPLARYV 95
           L D + +  +L+       A   
Sbjct: 384 L-DIEKRTWALKPMNCPGHAIMF 405


>gi|154278048|ref|XP_001539849.1| threonyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150413434|gb|EDN08817.1| threonyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 733

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 4/83 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDS-LGKFLPDEDRPNKGVFS 72
           G         +I N +   +R+ Y   G+  +++P +   D  + +           +F 
Sbjct: 326 GCPFLLPNGTKIFNALQALLRSEYRKRGYQEVQSPNM--YDVGIWRQSGHWQHYKDDMFK 383

Query: 73  LQDDDGQWISLRYDLTAPLARYV 95
           L D + +  +L+       A   
Sbjct: 384 L-DIEKRTWALKPMNCPGHAIMF 405


>gi|73667547|ref|YP_303563.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis
           str. Jake]
 gi|123745825|sp|Q3YQP0|SYT_EHRCJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|72394688|gb|AAZ68965.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis
           str. Jake]
          Length = 633

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 63/247 (25%), Gaps = 12/247 (4%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   + + SE +      + +  +     +            G +E    +E   
Sbjct: 381 DDAHIFCTESQVISEALKFCNLLMEVYKDFGFTNILVKFSDRPENRAGSDETWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
           K    +  +        G  Y     +   +AI         Q   V     G       
Sbjct: 441 KKSVEAANLNYVLNPGDGAFYGPKLEFVLKDAIGREWQCGTLQMDFVLPERLGAYYVGSD 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             +     +           + + ++              + I T+    +S+       
Sbjct: 501 GKKHHPIMLHRAILGTFERFIGILIEHHSGKFPIWLAPTQLSILTIS--EESIEYANSLK 558

Query: 398 QMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                  IR E+   + K      N +        P+  I G  E +   + I+ L    
Sbjct: 559 TKAEEHNIRVELDATNEKINYKIRNHIHK----KIPVFWIVGKKEVNENSVSIRYLESNT 614

Query: 455 ELSREIK 461
           +    I 
Sbjct: 615 QQVMPID 621



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 25  IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLR 84
           I   I + IR   E  G+  ++TP+L   +   K     D+  + +F L + + + ++++
Sbjct: 272 IYRTIENYIRKKLETNGYIEVKTPMLLNKELWEKS-GHWDKFRENMF-LSEAEDKVLAIK 329

Query: 85  YDLTA 89
                
Sbjct: 330 PMNCP 334


>gi|84393193|ref|ZP_00991956.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376159|gb|EAP93044.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 147

 Score = 45.6 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          Q   + L+ +G R +  L  ++  G +++    +  P  ++ G  E 
Sbjct: 49  IVMGITDKQSEYVQEIAKKLQKSGFRVKADL-RNEKIGFKIREHTLKRVPFMLVCGDQEM 107

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  S+ +A V+   + + E
Sbjct: 108 EAGEIAVRTRKGKDLGKFKVDDFISYIQAEVSNRKLNLEE 147


>gi|306822376|ref|ZP_07455755.1| glycyl-tRNA synthetase beta subunit [Bifidobacterium dentium ATCC
           27679]
 gi|304554374|gb|EFM42282.1| glycyl-tRNA synthetase beta subunit [Bifidobacterium dentium ATCC
           27679]
          Length = 547

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 29/97 (29%), Gaps = 2/97 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  S  Q     LR       +    +   G + +  D    PL +      
Sbjct: 426 VLPLSKKPELQSVAQNLAADLRQHDW--MIDYDEAGAIGRRYRREDEIGTPLCVTVDFDT 483

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                + I++    ++    +     +  AR+ +  +
Sbjct: 484 LDDQAVTIRERDTMQQERVALDKVADYVAARIGEKHV 520


>gi|296423870|ref|XP_002841475.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637715|emb|CAZ85666.1| unnamed protein product [Tuber melanosporum]
          Length = 658

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N ++  +R  Y   G++ + TP + Y+  L +         + +F+ + + 
Sbjct: 327 FLPHGTRIYNTLVGYLRQEYWKRGYEEVITPNM-YNAKLWETSGHWQNYQENMFTFEVEK 385

Query: 78  GQWISLRYDLTAP 90
            +   L+      
Sbjct: 386 DK-YGLKPMNCPG 397


>gi|282881336|ref|ZP_06290016.1| proline--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281304812|gb|EFA96892.1| proline--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 493

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 31/231 (13%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V ++   +         + S   R          EA++      +       G     
Sbjct: 194 LKVYADFAEQWMAVPVVQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 +++               +RLI AL                    V+I  +   
Sbjct: 254 SFDVTYLNKENKPEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPRLAPIQVVIVPISKT 313

Query: 387 SDSLSK----YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
           S+ L       +     LR  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 SEQLKAIHDQLKPIIDGLRAMGITVKFDDNDTKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
               +++                   R   + + T+ + +++  V K+L+E
Sbjct: 372 ENNTIEV------------------MRRDTLQKETVSLEKILEYVPKLLEE 404


>gi|262283493|ref|ZP_06061259.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260984|gb|EEY79684.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 616

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  +D L +     +     +F L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAD-LWRESGRYETYGDDLFKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +G    L    + T   L R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREGSDFILGPTHEETFTALVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|146279953|ref|YP_001170111.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145558194|gb|ABP72806.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 360

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 9/161 (5%)

Query: 38  ENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAE 97
           +  G  P+E  +L  + +L     ++ R     +   D     + LR D T P+ +    
Sbjct: 13  QAAGAVPVEADILLPAGTLLDLYGEDIRARA--YVTSDPLRGEMMLRPDFTVPVVQA--- 67

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           +      P R   +G VFR ++H   R  +++Q   +    +   A       +   L A
Sbjct: 68  HMGEGAEPARYTYMGEVFRRQEHVGPRASEYMQVGFELFDRAEPEAADAEVFALIAELLA 127

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
                 D      +  IL   +  +      K      V R
Sbjct: 128 ----PLDLRAATGDIGILMAAVRGLSTTEKRKAALLRHVWR 164


>gi|114798501|ref|YP_759307.1| tRNA synthetase class II core domain-containing protein [Hyphomonas
           neptunium ATCC 15444]
 gi|114738675|gb|ABI76800.1| tRNA synthetase class II core domain protein [Hyphomonas neptunium
           ATCC 15444]
          Length = 373

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 3/137 (2%)

Query: 27  NRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYD 86
           + ++   R ++E  G  PI+   +  +D   +   +       +    D  G  + +R D
Sbjct: 4   DALVAVARAVFEAAGGTPIDPDYVLPADIPLELSGEA--VRARLCVFPDHRGADMVMRPD 61

Query: 87  LTAPLA-RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADA 145
           LT P+A R  A                  FR       +              +   ADA
Sbjct: 62  LTLPVAQREAARREAGEASAKTYTYAARAFRQPVAPDDQLEFTQVGLERFGYEAGAEADA 121

Query: 146 EMCMMMADTLEAVGIKR 162
           E+  ++   +EA G++ 
Sbjct: 122 ELFALIHRAVEACGVQP 138


>gi|154706797|ref|YP_001424763.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|154356083|gb|ABS77545.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 660

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/351 (11%), Positives = 97/351 (27%), Gaps = 7/351 (1%)

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           + +     +  ++    +       D + ++ ++   Y I   +      I  +      
Sbjct: 298 YQEVHTPQLIDASLWDKSGHLGKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYR 357

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D                   L G+ + L     D++  F     + SE    +     + 
Sbjct: 358 DLPLRYAEFGACHRNEPSGTLHGL-MRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVY 416

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +    E+   +        G +E+   +E       N   ++       G  Y     +
Sbjct: 417 ADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDILPGEGAFYGPKIEF 476

Query: 308 EAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                   + +              G        S+     +           L + L+ 
Sbjct: 477 SLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGILLEE 536

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV +  M+             + L+  GIRA   L  ++  G +++  
Sbjct: 537 SAGKLPLW--LAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDL-RNEKIGFKIREH 593

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
                P  ++ G  E +   L ++ L      +  ++      +A ++Q +
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAEISQRS 644



 Score = 38.3 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            + E P G          I  ++ + IR+I   YG+  + TP L  + SL        + 
Sbjct: 264 FQPESP-GNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDA-SLWDKSGHLGKF 321

Query: 67  NKGVFSL 73
              +FSL
Sbjct: 322 GDDIFSL 328


>gi|58617659|ref|YP_196858.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|73919787|sp|Q5FGP1|SYT_EHRRG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|58417271|emb|CAI28384.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 633

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 7/85 (8%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCP 430
            + PV ++ +    D++              IRAE+ + + K      + +        P
Sbjct: 535 WLAPVQLSILTITEDAIDYAISLKHKAMKQNIRAEVDITNEKINYKIRSHISK----KIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKE 455
           +  I G  E     + I+ L    +
Sbjct: 591 VLWIIGKKEIETESVSIRYLESKDQ 615



 Score = 40.6 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 78/260 (30%), Gaps = 14/260 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K + I   I + IR   EN G+  ++TP L  S +L +     D+  + +F L + D
Sbjct: 265 WHEKGLIIYRIIENYIRKKLENNGYIEVKTPYL-LSKTLWEQSGHWDKFREHMF-LSEID 322

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++             +        R+Y+  P+   E     R+          + 
Sbjct: 323 NKVVAIKPMNCP-------CHVQIFNSKIRSYKDLPLRMAEFGTCHRYEASGALH-GLMR 374

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
             + T D        D +    +K  +  + +        IL K     + +        
Sbjct: 375 VRSFTQDDAHIFCTEDQIIEEALKFCNLLMEVYEVFGFKDILVKFSDRPEKRAGSDK--- 431

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              DK ++     VK        +       G  L     D +         +    L E
Sbjct: 432 -IWDKAEEALKASVKAANLNYVLNPGDGAFYGPKLEFTLKDAIGREWQCGTLQMDFVLPE 490

Query: 258 LVKGTIAGEKGFNELVVISE 277
            +     G  G     ++  
Sbjct: 491 RLGAYYTGSDGKKHHPIMLH 510


>gi|57239615|ref|YP_180751.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579605|ref|YP_197817.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|73919788|sp|Q5H9Z4|SYT_EHRRW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57161694|emb|CAH58624.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58418231|emb|CAI27435.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 633

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 7/85 (8%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCP 430
            + PV ++ +    D++              IRAE+ + + K      + +        P
Sbjct: 535 WLAPVQLSILTITEDAIDYAISLKHKAMKQNIRAEVDITNEKINYKIRSHISK----KIP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKE 455
           +  I G  E     + I+ L    +
Sbjct: 591 VLWIIGKKEIETESVSIRYLESKDQ 615



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 78/260 (30%), Gaps = 14/260 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K + I   I + IR   EN G+  ++TP L  S +L +     D+  + +F L + D
Sbjct: 265 WHEKGLIIYRIIENYIRKKLENNGYIEVKTPYL-LSKTLWEQSGHWDKFREHMF-LSEID 322

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++             +        R+Y+  P+   E     R+          + 
Sbjct: 323 NKVVAIKPMNCP-------CHVQIFNSKIRSYKDLPLRMAEFGTCHRYESSGALH-GLMR 374

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
             + T D        D +    +K  +  + +        IL K     + +        
Sbjct: 375 VRSFTQDDAHIFCTEDQIIEEALKFCNLLMEVYEVFGFKDILVKFSDRPEKRAGSDK--- 431

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              DK ++     VK        +       G  L     D +         +    L E
Sbjct: 432 -IWDKAEEALKASVKAANLNYVLNPGDGAFYGPKLEFTLKDAIGREWQCGTLQMDFVLPE 490

Query: 258 LVKGTIAGEKGFNELVVISE 277
            +     G  G     ++  
Sbjct: 491 RLGAYYTGSDGKKHHPIMLH 510


>gi|224084293|ref|XP_002191292.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 447

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 49/149 (32%), Gaps = 4/149 (2%)

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
           G  Y   +       +        I       +  E        + P+    +    +  
Sbjct: 296 GAFYGPKIDIRIRDALGRHHQCGTIQLDFQMPERFELEYARPLWLSPLQAMVIPQTPEVE 355

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK-- 448
              +    +LR  G+ A++          +++ A   +    ++ G  ER  G + ++  
Sbjct: 356 DYAREVQAVLRRGGLLADLDGDPGTTLARKIRRAQLTHYNFQLVVGRREREHGTVSVRTR 415

Query: 449 -DLAKGK-ELSREIKNNESWREARVAQIT 475
            +   G+ EL R ++  +  R++RV    
Sbjct: 416 ENRQLGELELPRVLRRLQELRDSRVPDAE 444



 Score = 41.0 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 3/105 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N +++ IR+ Y   GF  + TP L +S  L +        +  +FS+    
Sbjct: 104 FLPRGAHVYNTLVEFIRSEYRARGFSEVVTPNL-FSPRLWELSGHWQHYSPHIFSVPAAP 162

Query: 78  GQWISLRYDLTAPLARYVAENFDT-IVFPCRTYRIGPVFRNEKHG 121
            + +SL+           A    +    P R    G + RNE  G
Sbjct: 163 -EPLSLKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRNEPPG 206


>gi|308806117|ref|XP_003080370.1| putative glycyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116058830|emb|CAL54537.1| putative glycyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 529

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 43/159 (27%), Gaps = 7/159 (4%)

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE--SSTN 370
           F V  +  K         G  Y   V                 +  I      +      
Sbjct: 349 FQVSADMFKVEKVTKTLNGRNYTPSVIEPSFGIGRIMYCMFEHAFYIRPDDEQKTVLKLT 408

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRN 428
            +       I  + +D           + L + GI A++   ++ + G   +YA  D   
Sbjct: 409 PVVAPIKTTIFPLVNDDKLNDIANQMNKTLTSNGISAKLD-TTAVSIGK--RYARTDELG 465

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            P A+       + G + +++     ++   +       
Sbjct: 466 VPFAVTVDHRSTTDGTVTVRERDSCDQVRVPMTEVAELL 504


>gi|325298934|ref|YP_004258851.1| glycyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318487|gb|ADY36378.1| glycyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 514

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/266 (7%), Positives = 57/266 (21%), Gaps = 29/266 (10%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+    E    E+   VK     E          +  +  G+  +  +           
Sbjct: 257 QFIFRMREFEQMEMQFFVKPGTELEWFKKWKETRLKWHKALGFGDDHYRYHDHEKLAHYA 316

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGG--------RYDGLVSRFKGQNVPATGFSI 353
                 E ++ F     +                     +Y                   
Sbjct: 317 NAATDIEFLMPFGFKEVEGIHSRTNFDLSQHEKFSGKSIKYFDPEINESYTPYVIETSIG 376

Query: 354 GISRLIVALKSLESSTNNIKEMGPVL-------------ITTMDHDSDSLSKYQMYTQML 400
                +  + +  +          V+             +  +        K +     L
Sbjct: 377 VDRMFLSVMSASYTEEKLENGETRVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIMDDL 436

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
                          + G + +  D    P  +           + +++    ++    I
Sbjct: 437 ---KFHFHCQYDEKDSIGKRYRRQDAIGTPYCVTVDHQTLEDNCVTLRNRDTMEQERVAI 493

Query: 461 KNNESWREARVAQITIPISELVSTVK 486
            +  +    +     + I+ L+ T++
Sbjct: 494 ADLNNIIADK-----VSITSLLKTLQ 514


>gi|294887331|ref|XP_002772056.1| glycyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239875994|gb|EER03872.1| glycyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 596

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 33/111 (29%), Gaps = 10/111 (9%)

Query: 362 LKSLESSTN----NIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKN 416
           ++  E         +     V +  +  +           T  L+  GI  ++   S + 
Sbjct: 462 MEDQELRCYLSLPPVVAPTKVSVLPISSNPTQFKPAMHKITDALKEHGISYKVD-DSGQA 520

Query: 417 FGNQLKYA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            G   +YA  D    P  I       +   + +++     ++   I +   
Sbjct: 521 IGK--RYARTDEIGIPFGITIDFQSLNDDTVTLRERDSMSQIRLPIADVAD 569


>gi|302339640|ref|YP_003804846.1| glycyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636825|gb|ADK82252.1| glycyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 443

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/128 (11%), Positives = 33/128 (25%), Gaps = 21/128 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +       V +  +          Q     LR        F   S   G + +  D 
Sbjct: 336 LHFHPSLAPVTVAVLPLVKKDGIAEIAQGVASDLREE-FAV--FYDQSGAIGRRYRRMDE 392

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  +      +    + ++                      + Q+ +PI EL S ++
Sbjct: 393 IGTPFCVTIDYDTKEDKTVTLR------------------FRDSMEQVRVPIDELTSRIR 434

Query: 487 KILQENKE 494
             ++  + 
Sbjct: 435 AEIKNYRR 442


>gi|212212292|ref|YP_002303228.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212010702|gb|ACJ18083.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 660

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/351 (11%), Positives = 97/351 (27%), Gaps = 7/351 (1%)

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           + +     +  ++    +       D + ++ ++   Y I   +      I  +      
Sbjct: 298 YQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYR 357

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D                   L G+ + L     D++  F     + SE    +     + 
Sbjct: 358 DLPLRYAEFGACHRNEPSGTLHGL-MRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVY 416

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +    E+   +        G +E+   +E       N   ++       G  Y     +
Sbjct: 417 ADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDILPGEGAFYGPKIEF 476

Query: 308 EAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                   + +              G        S+     +           L + L+ 
Sbjct: 477 SLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGILLEE 536

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV +  M+             + L+  GIRA   L  ++  G +++  
Sbjct: 537 SAGKLPLW--LAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDL-RNEKIGFKIREH 593

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
                P  ++ G  E +   L ++ L      +  ++      +A ++Q +
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAEISQRS 644



 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            + E P G          I  ++ + IR+I   YG+  + TP L  + SL       ++ 
Sbjct: 264 FQPESP-GNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDA-SLWDKSGHLEKF 321

Query: 67  NKGVFSL 73
              +FSL
Sbjct: 322 GDDIFSL 328


>gi|165924098|ref|ZP_02219930.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165916454|gb|EDR35058.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 653

 Score = 45.6 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/351 (11%), Positives = 97/351 (27%), Gaps = 7/351 (1%)

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           + +     +  ++    +       D + ++ ++   Y I   +      I  +      
Sbjct: 298 YQEVHTPQLIDASLWDKSGHLEKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYR 357

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           D                   L G+ + L     D++  F     + SE    +     + 
Sbjct: 358 DLPLRYAEFGACHRNEPSGTLHGL-MRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVY 416

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +    E+   +        G +E+   +E       N   ++       G  Y     +
Sbjct: 417 ADFGFTEVIHKLSTRPEKRVGSDEVWTKAEQALAEALNRKGVEWDILPGEGAFYGPKIEF 476

Query: 308 EAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
                   + +              G        S+     +           L + L+ 
Sbjct: 477 SLRDCLGRIWQCGTVQVDFSVPERLGAHYIAEDGSKKPPVMIHRAILGSFERFLGILLEE 536

Query: 365 LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                     + PV +  M+             + L+  GIRA   L  ++  G +++  
Sbjct: 537 SAGKLPLW--LAPVQVVVMNITDRQADYVGQTVENLQNLGIRAHSDL-RNEKIGFKIREH 593

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
                P  ++ G  E +   L ++ L      +  ++      +A ++Q +
Sbjct: 594 TIARVPYLVVIGDREVADKTLSVRALEDEASTTITLEEFARQLKAEISQRS 644



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
            + E P G          I  ++ + IR+I   YG+  + TP L  + SL       ++ 
Sbjct: 264 FQPESP-GNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDA-SLWDKSGHLEKF 321

Query: 67  NKGVFSL 73
              +FSL
Sbjct: 322 GDDIFSL 328


>gi|323698513|ref|ZP_08110425.1| threonyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323458445|gb|EGB14310.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 645

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 5/89 (5%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +  +   L+   D   D + K + +   L + GIR E     ++  G +++ A 
Sbjct: 529 GAYPVWLAPVQARLLNVTDAQLDFMKKAEAF---LVSKGIRVE-ADTRNEKLGYKIREAQ 584

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
               P  ++ G  E   G + I+    G+
Sbjct: 585 VEKVPYMLVIGDKEVEAGCVNIRS-RDGE 612



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G +    + + +R  + D  R  +   G+D ++ P++   +   K     D   + ++  
Sbjct: 261 GMSLWHPRGMLLRAILEDFERKEHLKRGYDLVQGPIILKRELWEKS-GHYDNYRENMY-F 318

Query: 74  QDDDGQWISLRY 85
            + D Q   ++ 
Sbjct: 319 TEIDEQAYGIKP 330


>gi|291277468|ref|YP_003517240.1| prolyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964662|emb|CBG40517.1| prolyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 577

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G  +      ++  +I   IR      G   +    +  S+ L K     ++  K 
Sbjct: 34  QIGSGIYNFLPLGKKVLEKISQIIREEMNEAGALEMAAGFVVPSE-LWKQSGRYEKYGKE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +   +D       L  
Sbjct: 93  LLRFKDRRENEFVLGP 108


>gi|28572736|ref|NP_789516.1| prolyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|81839165|sp|Q83HI1|SYP_TROW8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28410869|emb|CAD67254.1| prolyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 601

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++R++I + IR          +  P L  +D   K           
Sbjct: 36  QTGSGIFSWMPLGLKVRHKIENIIRYEMRQVNAIEVLFPALFSADLF-KQSGRWSEYGDD 94

Query: 70  VFSLQDD 76
           +F L+D 
Sbjct: 95  IFRLKDR 101


>gi|255994489|ref|ZP_05427624.1| glycine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993202|gb|EEU03291.1| glycine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 466

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/243 (10%), Positives = 53/243 (21%), Gaps = 31/243 (12%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F      + +  +    +     E    EL   SE              S         
Sbjct: 242 DFWQNYCVEFLKTIGIKEENIRKREHSKEELSHYSE-----ATTDIEYNFSFGWGELWGI 296

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                ++         E+              Y    +  K               L+  
Sbjct: 297 ANRTDFDLKQHTKESGEE------------LVYQDPETNRKFTPYCIEPSLGADRLLLAV 344

Query: 362 LKS--LESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----------AGIRAEM 409
           L     E   +  K    V++    + +   +     ++ L +                 
Sbjct: 345 LNDAYEEEIVDKDKNTSRVVMRLHPYLAPYKAAVLPLSKQLSSVSDPIFEKLIKDFPV-- 402

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               + + G + +  D    P  I         G + I+D    ++    I     +   
Sbjct: 403 DYDKTGSIGKRYRRQDEIGTPYCICVDFDTEKDGKVTIRDRDTMEQTRIGIDEVSGYIGD 462

Query: 470 RVA 472
           R+ 
Sbjct: 463 RIG 465


>gi|224064768|ref|XP_002301553.1| predicted protein [Populus trichocarpa]
 gi|222843279|gb|EEE80826.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 77/256 (30%), Gaps = 32/256 (12%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             E      + ++   E++ I EL R+       I +       +E + G +Y   +   
Sbjct: 170 WQEGHTAFASKQEADEEVLQILELYRRIYEEFLAIPVIKGKKSEMEKFAGGLYTTSVEAF 229

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSR----------FKGQNVPATGFSIGISRLIVALKS 364
           + N  +      S   G  +  +                QN  A         ++V    
Sbjct: 230 IPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDD 289

Query: 365 LESSTNNIKEMGPVLITTMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                        V++  + +                  L  AGIRAE     + + G +
Sbjct: 290 KGLVLPPKVASVQVIVVPVPYKDADTQGIFDACAATVDTLCEAGIRAEADFRENYSPGWK 349

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             + + +  PL I  G  + +   ++                  + R    A++ I    
Sbjct: 350 YSHWEMKGVPLRIEIGPKDLANNQVR------------------AVRRDNAAKVDISRDS 391

Query: 481 LVSTVKKILQENKEEI 496
           L+  VK +L + ++ +
Sbjct: 392 LMEKVKDMLDDIQQRL 407


>gi|157150969|ref|YP_001451117.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189083519|sp|A8AZA7|SYP_STRGC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|157075763|gb|ABV10446.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 616

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  +D L +     +     +F L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAD-LWRESGRYETYGDDLFKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +G    L    + T   L R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREGSDFILGPTHEETFTALVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|145608852|ref|XP_369806.2| hypothetical protein MGG_06321 [Magnaporthe oryzae 70-15]
 gi|145016282|gb|EDK00772.1| hypothetical protein MGG_06321 [Magnaporthe oryzae 70-15]
          Length = 665

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 19/119 (15%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              VLI  +    D +   Q  +Q LR+ G+ + +   SS   G +    D    PL I 
Sbjct: 544 PTKVLIVPLSRHDDFVPFVQKISQKLRSVGVSSRVD-DSSATIGRRYSRNDELGTPLGIT 602

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                   G + ++D                       Q+     ++V  +++++  NK
Sbjct: 603 VDFQTVKDGTITLRDRDT------------------TVQVRADQDKIVEAIQELVSGNK 643


>gi|301056404|ref|YP_003794615.1| glycyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378573|gb|ADK07477.1| glycyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 458

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 223 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|212550458|ref|YP_002308775.1| prolyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|259511574|sp|B6YQ92|SYP_AZOPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|212548696|dbj|BAG83364.1| prolyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 493

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 63/237 (26%), Gaps = 15/237 (6%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E      + E+   E    L + +  V +         + +   R          E +
Sbjct: 173 WQEGHTAHTSKEEAIEETLKILDIYANFVEQYMAIPVTKGVKTPCERFAGATDTYCIETL 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           +++   +           +RL+ AL        
Sbjct: 233 MQDGKALQAGTSHFLGQNFAKAFDVQFLNKKGKREYVWATSWGVSTRLMGALIMMHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHD----SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       ++I  +  D     D   K        +   I  +     +K  G + 
Sbjct: 293 GLVLPPKLAPCQIVIIPVSKDRTSLEDINEKATNIINDFKNLDINVKYDNTDNKKPGWKF 352

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITI 476
              + +  P+ +  GT +   G +++  +D    + +S     + +       Q  I
Sbjct: 353 AEYELKGIPIRLTLGTRDLENGTIEVSRRDTLTKETISINNITDYANNLLNDIQQNI 409


>gi|182679322|ref|YP_001833468.1| threonyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182635205|gb|ACB95979.1| threonyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 644

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 29/95 (30%), Gaps = 2/95 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   ++  +R   +  G+  + TP +    +L +         + +F  
Sbjct: 262 GTVFWHPKGWTLFQTLISYMRRRQQEAGYVEVNTPQV-LDRALWETSGHWSTYRENMFIT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
             +D +  +L+        +   +N          
Sbjct: 321 TTEDERVFALKPMNCPGHVQIF-KNGLKSYRDLPL 354



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 46/157 (29%), Gaps = 23/157 (14%)

Query: 322 PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT 381
           P  FG+       D  V     + +    F        + ++              +++ 
Sbjct: 493 PGRFGAFYIAPEGDKTVPVMIHRAM----FGSLERFTGILIEHYAGHLPLWLSPLQIVVA 548

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAI 433
           T+  + D  +   M     R  G+R +  L + K        +             P+  
Sbjct: 549 TITQEGDDYAYEVMAAA--RKRGLRVDGDLRNEKITYKVREHSLAK---------VPVLF 597

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           + G  E +   + I+ L    ++S  ++       A 
Sbjct: 598 VLGKKEAAERTVSIRRLGSNDQISLGLEQALELLAAE 634


>gi|73981323|ref|XP_860781.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 5
           [Canis familiaris]
          Length = 636

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P  +  +   ++     +   Q L+ AG+  ++   S      +++ A   +  
Sbjct: 525 WPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDADSGLTLSRRVRRAQLAHYN 584

Query: 431 LAIIQGTGERSRGMLQIK---DLAKGK 454
              + G  E+S+  + I+   +   G+
Sbjct: 585 FQFVVGQKEQSKKTVNIRTRDNRQLGE 611



 Score = 37.9 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 30  LDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
           L  +   Y   GF  ++TP L +S  L +     +   + +F LQ      ++
Sbjct: 254 LKLLTAEYTRRGFSEVKTPTL-FSAKLWELSGHWEHYQEDMFVLQPPGSDRLA 305


>gi|73981319|ref|XP_860710.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 3
           [Canis familiaris]
          Length = 304

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P  +  +   ++     +   Q L+ AG+  ++   S      +++ A   +  
Sbjct: 193 WPLWLSPFQVVVIPVGAEQEEYAREAQQRLQAAGLVCDLDADSGLTLSRRVRRAQLAHYN 252

Query: 431 LAIIQGTGERSRGMLQIK---DLAKGK 454
              + G  E+S+  + I+   +   G+
Sbjct: 253 FQFVVGQKEQSKKTVNIRTRDNRQLGE 279


>gi|111658322|ref|ZP_01409011.1| hypothetical protein SpneT_02000512 [Streptococcus pneumoniae
           TIGR4]
          Length = 612

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 33  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 91

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 92  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 149

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 150 FIMKDAYSFHANYD 163


>gi|268610123|ref|ZP_06143850.1| prolyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 480

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 1/96 (1%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V++    H    L K     + L+ AG+R ++    + + G +    + +  PL +  G 
Sbjct: 295 VIVPIAQHKEGVLDKANELLERLKKAGVRVKLDDTDN-SPGWKFAEYEMKGVPLRVEIGP 353

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
            +       I     G++    +   ES    ++ +
Sbjct: 354 RDIEENKCIIASRWNGEKADFSLDELESAVAQKLQE 389


>gi|225856022|ref|YP_002737533.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254782921|sp|C1CIE5|SYP_STRZP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225724634|gb|ACO20486.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|182683244|ref|YP_001834991.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303259373|ref|ZP_07345350.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261128|ref|ZP_07347077.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263456|ref|ZP_07349379.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303265748|ref|ZP_07351646.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303267821|ref|ZP_07353623.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|226701345|sp|B2ISI9|SYP_STRPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|182628578|gb|ACB89526.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|302637965|gb|EFL68451.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639307|gb|EFL69765.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302642517|gb|EFL72862.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644656|gb|EFL74905.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302647229|gb|EFL77453.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|148994606|ref|ZP_01823748.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489739|ref|ZP_02713938.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147927136|gb|EDK78174.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183571778|gb|EDT92306.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332075929|gb|EGI86396.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|18313224|ref|NP_559891.1| glycyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|18160741|gb|AAL64073.1| glycyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 586

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/136 (11%), Positives = 37/136 (27%), Gaps = 7/136 (5%)

Query: 336 GLVSRFKGQNVPATGFSIGISRLIV-ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
            L         P+ G    +  ++  A+   E             +          + Y 
Sbjct: 430 DLEKFIPHVVEPSFGLDRIMYVVLESAVVEEEGRVYLRLPPDIAPVKACILPIVKRADYV 489

Query: 395 MYTQMLRT----AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              + L       G             G++    D    PLA+         G + I+D 
Sbjct: 490 EIGRTLWRSLARQGFVV--LYEDEGTIGSRYASCDEIGTPLAVTIDEKTPVDGTVTIRDR 547

Query: 451 AKGKELSREIKNNESW 466
              +++  ++ +  ++
Sbjct: 548 DTKRQVRVKLGDVVTF 563



 Score = 40.2 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 5/51 (9%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFD----PIETPLLEYSDSLGKFL 60
          GF D     +++R  I++  R ++    +      +ETP++          
Sbjct: 29 GFYDYGPLGVQLRRNIVEKWRKVFVLP-YQDLIIEVETPIIMPEPVFKASG 78


>gi|88810665|ref|ZP_01125922.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88792295|gb|EAR23405.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 641

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSD-SLGKFLPDEDRPNKGVFS 72
           G         R+   + D +R   + +G+  + TP  E  D SL +      +    +F+
Sbjct: 261 GMVFWHPNGWRVYLLLQDYLRAKLDAHGYREVRTP--ELVDRSLWERSGHWQKFRADMFT 318

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
             + + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 319 -TESEKRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGNCHRNEASGTLH 370



 Score = 36.7 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 1/103 (0%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P+    ++      +      + L   G RA   L  ++  G +++    +  P
Sbjct: 532 WPVWLAPIQAVVLNITDRQGAYASGIEKRLAEHGFRAYGDL-RNEKIGFKIREHTLQKVP 590

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
             +I G  ER    + ++        S  +K         VAQ
Sbjct: 591 YLLIVGERERESMTVAVRTREGEDLGSMPLKAFIERLSGEVAQ 633


>gi|229007232|ref|ZP_04164833.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228753986|gb|EEM03423.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 455

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/238 (7%), Positives = 56/238 (23%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +         K  +       E + + +       + +           
Sbjct: 220 LEFFCKPGEDLEWFTFWRNTCKNWLLSLGMHEESMRLRDHGEDELSHYSNATTDIEFKFP 279

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 280 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 339

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L       +     +
Sbjct: 340 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGAGEVFAEL-AKDFVVDFD--ET 396

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 397 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 454


>gi|15902287|ref|NP_357837.1| prolyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116515963|ref|YP_815764.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|81845175|sp|Q8DRB0|SYP_STRR6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|122279350|sp|Q04MI4|SYP_STRP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|15457791|gb|AAK99047.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076539|gb|ABJ54259.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|15836031|ref|NP_300555.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8978870|dbj|BAA98706.1| prolyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 568

 Score = 45.2 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG-VF 71
           +G         R+ +++++ IR      G   +  PLL  ++        E   ++G ++
Sbjct: 37  KGVYTYTPLLWRVVSKMMNIIREELNAIGGQELLLPLLHNAELWQHTGRWEAFTSEGLLY 96

Query: 72  SLQDDDGQWISLRY 85
           +L+D +G+   L  
Sbjct: 97  TLKDREGKSHCLAP 110



 Score = 40.6 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 3/132 (2%)

Query: 342 KGQNVPATGFSIGISRLIVAL-KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                   G    ++  +  L                + I     D+ S    +     L
Sbjct: 439 CWMGTYGIGVGRTLAACVEQLPDDRGIVWPKALAPFSITIAFNGGDTVSQELAETIYHEL 498

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           ++ G    +     +  G +LK +D    P  +I G   +S G+ +I+    G++ +   
Sbjct: 499 QSQGYEPLLDDRDER-LGFKLKDSDLIGIPYKLILGKSYQSSGIFEIES-RSGEKYTVSP 556

Query: 461 KNNESWREARVA 472
           +   +W +  +A
Sbjct: 557 EAFPTWCQNHLA 568


>gi|313203193|ref|YP_004041850.1| prolyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312442509|gb|ADQ78865.1| prolyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 490

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 64/235 (27%), Gaps = 11/235 (4%)

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                      A  +    L V ++   +         + S   R          EA++ 
Sbjct: 172 EGHTAHATEAEAVTEARKMLEVYADFAERFMAVPVLKGVKSANERFAGALDTYCIEALMQ 231

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLES 367
                +       G           + +    +          +RL+ AL          
Sbjct: 232 DGKALQAGTSHFLGQNFAKAFDVTFMDKSNKLDYVWATSWGVSTRLMGALIMTHSDDNGL 291

Query: 368 STNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                     V+I  +  + + L+    K       L+  GI  +     +K  G +   
Sbjct: 292 VLPPNLAPFQVVIVPIYKNEEQLAAIDAKVDEMIPKLKALGISVKYDNNDNKKPGWKFAE 351

Query: 424 ADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITI 476
            + +  P+ +  G  +   G +++  +D    + ++ E   N      +  Q  I
Sbjct: 352 YELKGVPVRLALGARDLENGTVEVARRDTLTKETVAIEGVENYISDLLKTIQANI 406


>gi|269303377|gb|ACZ33477.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 568

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG-VF 71
           +G         R+ +++++ IR      G   +  PLL  ++        E   ++G ++
Sbjct: 37  KGVYTYTPLLWRVVSKMMNIIREELNAIGGQELLLPLLHNAELWQHTGRWEAFTSEGLLY 96

Query: 72  SLQDDDGQWISLRY 85
           +L+D +G+   L  
Sbjct: 97  TLKDREGKSHCLAP 110



 Score = 40.2 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 3/132 (2%)

Query: 342 KGQNVPATGFSIGISRLIVAL-KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                   G    ++  +  L                + I     D+ S    +     L
Sbjct: 439 CWMGTYGIGVGRTLAACVEQLADDRGIVWPKALAPFSITIAFNGGDTVSQELAETLYHEL 498

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           ++ G    +     +  G +LK +D    P  +I G   +S G+ +I+    G++ +   
Sbjct: 499 QSQGYEPLLDDRDER-LGFKLKDSDLIGIPYKLILGKSYQSSGIFEIES-RSGEKYTVSP 556

Query: 461 KNNESWREARVA 472
           +   +W +  +A
Sbjct: 557 EAFPTWCQNHLA 568


>gi|229496630|ref|ZP_04390344.1| glycyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316527|gb|EEN82446.1| glycyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 518

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 24/93 (25%), Gaps = 3/93 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K +   + LR              + G + +  D    P  I      
Sbjct: 415 VLPLVRKDGLDEKAREVVRELR---FDFTCQYDEKDSIGKRYRRQDAIGTPYCITIDNQT 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                + I++    ++    I +       +V 
Sbjct: 472 MEDNTVTIRERDTMEQHRVAITDLRKEIAQKVD 504


>gi|256830760|ref|YP_003159488.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579936|gb|ACU91072.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 644

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    +     +     L+  G+R E+ L  ++  G +++ A     P A+
Sbjct: 533 WLAPVQARILTVTDNHDEFARKCQDALQREGVRVELDL-RNEKLGYKVREAQMEKVPYAL 591

Query: 434 IQGTGERSRGMLQIKDL 450
           + G  E  +  + ++ L
Sbjct: 592 VIGDQEVEQACVNVRML 608


>gi|229032557|ref|ZP_04188522.1| Glycyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728742|gb|EEL79753.1| Glycyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 487

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 252 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFRFP 311

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 312 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 371

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 372 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 428

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 429 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 486


>gi|327312529|ref|YP_004327966.1| glycine--tRNA ligase [Prevotella denticola F0289]
 gi|326946200|gb|AEA22085.1| glycine--tRNA ligase [Prevotella denticola F0289]
          Length = 515

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/234 (7%), Positives = 48/234 (20%), Gaps = 29/234 (12%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP------VMNEKQKPVVFG 326
                     G      +                 E  + F       + +     +   
Sbjct: 287 KHRLAWHEALGMGDENYRFHDHEKLAHYANAATDIEFHMPFGFKEVEGIHSRTDFDLSQH 346

Query: 327 SVGGGGRYDGLVSRFKGQNVP-----------ATGFSIGISRLIVALKS----LESSTNN 371
               G +             P                +  S     L++    +      
Sbjct: 347 EKFSGRQIKYFDPERNESYTPYDVETSIGVDRMFLSVMCHSYTEEQLENGSSRVVLKLPE 406

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  + +      K Q     L          + +  + G + +  D    P 
Sbjct: 407 PLAPVKCAVLPLVNKDGLPEKAQEIVNSL---KFHFNTHMEAKDSIGKRYRRQDAIGTPF 463

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
            +       +   + ++     K+    ++      E R     + I+ L+  +
Sbjct: 464 CVTVDGDTLNDNTVTLRYRDSMKQERVPVEKLRGIIEDR-----VSITSLLKKI 512


>gi|194397930|ref|YP_002036964.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|307126481|ref|YP_003878512.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|226701343|sp|B5E6T8|SYP_STRP4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|194357597|gb|ACF56045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|306483543|gb|ADM90412.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|224531616|ref|ZP_03672248.1| threonyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511081|gb|EEF81487.1| threonyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 581

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 2/83 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +  ++             +  GIR ++   SS+    +++    +  P   
Sbjct: 480 WLSPVQAVIIPVNNTVEDYAIKVLNKFKNEGIRIKLDNSSSR-MNAKIREYQAKKIPYMF 538

Query: 434 IQGTGERSRGMLQIKDLAKGKEL 456
           I G  E +   + I+     +++
Sbjct: 539 IIGEREVAEERISIRT-RTNEQI 560


>gi|149011134|ref|ZP_01832439.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147764770|gb|EDK71700.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|107102275|ref|ZP_01366193.1| hypothetical protein PaerPA_01003332 [Pseudomonas aeruginosa PACS2]
          Length = 621

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 9/142 (6%), Positives = 36/142 (25%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +  ++G+  + TP +     L +         + +F+ 
Sbjct: 242 GMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDR-ILWERSGHWSNYAENMFTT 300

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +  +  +++        +   +   +                 +              
Sbjct: 301 SSES-RDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGF 359

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + ++    AD +
Sbjct: 360 TQDDAHIFCTEEQVKKEAADFI 381



 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 68/230 (29%), Gaps = 4/230 (1%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    ++   +    A   G +EL   +E   
Sbjct: 362 DDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSDELWDRAEGAL 421

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSR 340
               N + +        G  Y     +  +      N +   + +            ++ 
Sbjct: 422 ADALNESGLAWEYQPGEGAFYGPKIEF-TLKDCLGRNWQCGTLQYDPNLPERLDASYIAE 480

Query: 341 FKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
              +  P       +G     + +     +      + P     M+             +
Sbjct: 481 DNNRKRPVMLHRAILGSFERFIGMLIEHYAGAFPAWLAPTQAVVMNITDKQADFAAEVVR 540

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 541 ILGESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVESKAVAVR 589


>gi|310815279|ref|YP_003963243.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754014|gb|ADO41943.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 648

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 68/263 (25%), Gaps = 24/263 (9%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F     + SE    +    S+  +         +        G  E    +E   
Sbjct: 392 DDGHIFCTEDQIESETKKFIEFLASVYADLGFESWRVKLSTRPEKRIGTEESWDHAEQSL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
            +               G  Y     +   +AI         Q                 
Sbjct: 452 GNACRKAGYDYELQEGEGAFYGPKLEFVLTDAIGRDWQCGTLQVDPNLPERLDANYIGQD 511

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            ++ +   +           + + +++             V++ ++  D+D         
Sbjct: 512 GAKHRPIMLHRACLGSFERFVGILIENFAGKLPFWLAPRQVVVASIVSDAD--DYVHEVV 569

Query: 398 QMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
             L  AG+RAE    + K        + G           PL +  G  E     + ++ 
Sbjct: 570 AALSAAGVRAEADTRNEKINYKVREHSLGK---------VPLILAIGAREVEERTVTVRR 620

Query: 450 LAKGKELSREIKNNESWREARVA 472
           L  G+  +  +  +    E R +
Sbjct: 621 L--GENQTATMSLDAILAETRAS 641


>gi|239931399|ref|ZP_04688352.1| glycyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291439772|ref|ZP_06579162.1| glycyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291342667|gb|EFE69623.1| glycyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 460

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  + +   K +   Q LR      E     +   G + +  D    P  +    
Sbjct: 367 VAVLPLSRNPELSPKAKGLAQALR-QNWNIEFD--DAGAIGRRYRRQDEIGTPFCVTVDF 423

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    K+    +   E +  AR
Sbjct: 424 DTLDDNAVTVRERDTMKQERISLDQIEGYLAAR 456


>gi|228999674|ref|ZP_04159250.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760036|gb|EEM09006.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 458

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/238 (7%), Positives = 56/238 (23%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +         K  +       E + + +       + +           
Sbjct: 223 LEFFCKPGEDLEWFTFWRNTCKNWLLSLGMHEESMRLRDHGEDELSHYSNATTDIEFKFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L       +     +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGAGEVFAEL-AKDFVVDFD--ET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|189461379|ref|ZP_03010164.1| hypothetical protein BACCOP_02034 [Bacteroides coprocola DSM 17136]
 gi|189431908|gb|EDV00893.1| hypothetical protein BACCOP_02034 [Bacteroides coprocola DSM 17136]
          Length = 496

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 8/115 (6%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  + + L    +K +     LR  GI  +     +K  G   
Sbjct: 293 GLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVTKLREMGISVKYDNADNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           K+AD   +  P+ ++ G  +     ++I      ++ +R     E + +  + +I
Sbjct: 351 KFADYELKGVPVRLVMGGRDLENNTMEIMRRDTLEKETRSCDGIEEYVKNLLEEI 405


>gi|156089629|ref|XP_001612221.1| tRNA synthetase class II core domain containing protein [Babesia
           bovis]
 gi|154799475|gb|EDO08653.1| tRNA synthetase class II core domain containing protein [Babesia
           bovis]
          Length = 439

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   L    P G +       RI NRI   I       G   +E P+L  SD++      
Sbjct: 50  KPGILTHMSP-GISTVLPIGKRIVNRIERVIHVEMSRIGAKEVELPMLLSSDTIN---ER 105

Query: 63  EDRPNKGVFSLQDDDGQWISLRY 85
            +   + +FSL D +G+   L  
Sbjct: 106 RNEFGRELFSLTDRNGKHYDLCP 128


>gi|148988004|ref|ZP_01819467.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|148996688|ref|ZP_01824406.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149001621|ref|ZP_01826594.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|168484646|ref|ZP_02709598.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168493960|ref|ZP_02718103.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|168576309|ref|ZP_02722192.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|169833273|ref|YP_001693792.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225860301|ref|YP_002741810.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|237649666|ref|ZP_04523918.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821366|ref|ZP_04597211.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|298229643|ref|ZP_06963324.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298256044|ref|ZP_06979630.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502082|ref|YP_003724022.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|307066942|ref|YP_003875908.1| prolyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|226701344|sp|B1I8Z1|SYP_STRPI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782922|sp|C1CPD8|SYP_STRZT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147757263|gb|EDK64302.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147760079|gb|EDK67068.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147926468|gb|EDK77541.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|168995775|gb|ACA36387.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|172042164|gb|EDT50210.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183576158|gb|EDT96686.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183577873|gb|EDT98401.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225727194|gb|ACO23045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237677|gb|ADI68808.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|301801205|emb|CBW33879.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|306408479|gb|ADM83906.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|327390681|gb|EGE89021.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332077566|gb|EGI88027.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332202178|gb|EGJ16247.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332203430|gb|EGJ17497.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
 gi|332204272|gb|EGJ18337.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|146304669|ref|YP_001191985.1| prolyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|172046942|sp|A4YI09|SYP_METS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145702919|gb|ABP96061.1| prolyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 480

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 7/115 (6%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                       +L+ +GIR  +     K  G +    + +  P+ I  G  E + G   
Sbjct: 305 EKINKYAMEVESVLKNSGIRVALDASEDKTPGEKYYIWELKGVPIRIEIGPRELNSGTAF 364

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPI-----SELVSTVKKI--LQENKE 494
           +K     +  S + +           QI+  +      +    VK+   L E K+
Sbjct: 365 LKRRDTLEGKSVKREELVKEFRNLEDQISADLRKRAWEQFKERVKRFQSLDEAKK 419



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +IR  +   IR + +  G + +  PLL     L K         K V
Sbjct: 32  PVKGSGVWMPYGFKIRQNVTTLIRKLLDETGHEEVLFPLLIPETLLKKEAEHIKGFEKEV 91

Query: 71  FSLQDDDGQW-----ISLRY 85
           F      G+       +LR 
Sbjct: 92  F-WVTHGGEDELEERFALRP 110


>gi|309802149|ref|ZP_07696258.1| glycine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|308221229|gb|EFO77532.1| glycine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 491

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 29/97 (29%), Gaps = 2/97 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  S  Q     LR       +    +   G + +  D    PL +      
Sbjct: 370 VLPLSKKPELQSVAQNLAADLRQHDW--MIDYDEAGAIGRRYRREDEIGTPLCVTVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                + I++    ++    +     +  AR+ +  +
Sbjct: 428 LDDQAVTIRERDTMQQERVALDKVADYVAARIGEKHV 464


>gi|296877243|ref|ZP_06901283.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431763|gb|EFH17570.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 616

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 43/140 (30%), Gaps = 5/140 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKGIMRQEFEKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +G    L    + T   + R   +++  +       +       ++   G  R    
Sbjct: 97  KNREGSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQ-PKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMM 150
              D     A     ++   
Sbjct: 156 IMKDGYSFHANYDSLDVTYD 175



 Score = 37.9 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D  SL+      + L   G    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNIKDEASLALTNQIEESLVNKGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|295687966|ref|YP_003591659.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295429869|gb|ADG09041.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 658

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +   + D +R   +  G+  ++TP +    SL +     ++    +F 
Sbjct: 266 KGMVFWHPKGWALYRVLEDYMRRRLDAAGYKEVKTPQI-LDKSLWEKSGHAEKFGHAMFM 324

Query: 73  LQDDDGQWISLRYDLTAP 90
            +  +G+ ++++      
Sbjct: 325 CESAEGEVLAVKPMNCPG 342


>gi|260947818|ref|XP_002618206.1| hypothetical protein CLUG_01665 [Clavispora lusitaniae ATCC 42720]
 gi|238848078|gb|EEQ37542.1| hypothetical protein CLUG_01665 [Clavispora lusitaniae ATCC 42720]
          Length = 686

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 48/140 (34%), Gaps = 13/140 (9%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--------YQMYTQMLRTAGIRAEMFLGSS 414
            +             V++  +   S S  +         +     L  AG+R      ++
Sbjct: 459 DNKGLVLPPRVAQNQVVVVPVGLTSKSTPEQRDAVNGGAKKVEDALADAGLRVVGDYRNN 518

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
            + G +    + +  PL +  G  + + G +  ++    G++   ++ +  +     +  
Sbjct: 519 YSPGWKFADWELKGVPLRVEFGPKDLAAGQVTAVR-RDNGEKYVVKLGDLSTRIPELL-- 575

Query: 474 ITIPISELVSTVKKILQENK 493
             +   E++   +K   E++
Sbjct: 576 -ELTQREMLERARKAFDEHR 594


>gi|225016294|ref|ZP_03705486.1| hypothetical protein CLOSTMETH_00197 [Clostridium methylpentosum
           DSM 5476]
 gi|224950969|gb|EEG32178.1| hypothetical protein CLOSTMETH_00197 [Clostridium methylpentosum
           DSM 5476]
          Length = 574

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 37/125 (29%), Gaps = 20/125 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                +      +    +   D     +     L +      +      N G Q   AD 
Sbjct: 468 IWPYAVAPWQIHICALSNKKMDVQPIARELYDKL-SKNYEVILD-DRGANAGVQFADADL 525

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ I+          + +K++  G+         E     +  Q  + + ++ + + 
Sbjct: 526 LGVPIRIV----------VSVKNIENGE--------VEISTRDKSIQTKVKLEDIEAEIA 567

Query: 487 KILQE 491
           KI+ +
Sbjct: 568 KIVAQ 572



 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 61/227 (26%), Gaps = 13/227 (5%)

Query: 24  RIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISL 83
           RI N+I + IR   +      +  P++   + L       +     +    D  G    L
Sbjct: 55  RIVNKIENIIREEMDAIDGQEVLFPVVLPRE-LWDESGRYESVGSELVRFHDRSGGDYVL 113

Query: 84  RYDLT-----APLARYVAENFDTIVFPCRTYR----IGPVFRNEKHGPGRFRQFIQCDVD 134
              +T       LAR  A+++    F     +      P  R        F         
Sbjct: 114 G--MTHEEAAVHLARNEAQSYAKYPFMIYQIQTKFRDEPRSRGGLIRVREFTMKDAYSFH 171

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
                 E              E VG+         +   +   +  +  L  D   +  +
Sbjct: 172 TSQEDLERYYDICHKAYERIFERVGLPEVISVGSDSGM-MGGAVAHEFMLLCDAGEDTIV 230

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                  K +    +GV   +     +     T GAN     +D + 
Sbjct: 231 TCDSCGYKANMEVAEGVLDKVEAQPAEIKKVHTPGANTIDALVDCLG 277


>gi|152996610|ref|YP_001341445.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189083612|sp|A6VYI1|SYT_MARMS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|150837534|gb|ABR71510.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 645

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 39/375 (10%), Positives = 101/375 (26%), Gaps = 9/375 (2%)

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           +R+                + +     +        +       + +     +  DY + 
Sbjct: 271 WRLYQAVEQYMRQKQLDNNYQEVKTPQIVDRVLWEKSGHWGKYHENMFTTHSENRDYAVK 330

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             N      +  +      D                   L G+ + +     D+   F  
Sbjct: 331 PMNCPCHIQVYNQGLKSYRDLPFRMAEFGSCHRNEPSGALHGI-MRVRNFVQDDGHIFVT 389

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
              +  E  + +     +  +     +   +        G +E+   +E       +S  
Sbjct: 390 EGQIQQEVSEFIDLLHEVYADFGFDNIVYRLSTRPEQRVGSDEVWDKAEKALSEALDSAG 449

Query: 289 IKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQN 345
           +        G  Y     +   +AI         Q      +  G        SR     
Sbjct: 450 LDWEELPGEGAFYGPKIEFSLKDAIGRVWQCGTIQVDFSMPTRLGAQYVSEDGSRQTPVM 509

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +           + + ++  E +           +  M+          +  + L + G 
Sbjct: 510 LHRAIVGSLERFIGILIEDTEGAFPVWLAPEQ--VVIMNITDRQADYCSVLEKRLNSNGF 567

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR-EIKNNE 464
           RA++ L  ++  G +++    +  P  I+ G  E  +  + ++    G++L    I + E
Sbjct: 568 RAKLDL-RNEKIGFKIREHTLQRVPYMIVVGDKEVEQEQVAVRT-RTGEDLGVMSISDFE 625

Query: 465 SWREARVAQITIPIS 479
              +  +A+ +    
Sbjct: 626 GLLQQEIARRSRKQE 640



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 38/112 (33%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  R+   +   +R    +  +  ++TP +     L +      + ++ +F+ 
Sbjct: 262 GMVFWHPKGWRLYQAVEQYMRQKQLDNNYQEVKTPQIVDR-VLWEKSGHWGKYHENMFTT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
             ++ +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 321 HSEN-RDYAVKPMNCPCHIQVYNQGLKSYRDLPFRMAEFGSCHRNEPSGALH 371


>gi|50365084|ref|YP_053509.1| glycyl-tRNA synthetase [Mesoplasma florum L1]
 gi|59798529|sp|Q6F1J8|SYG_MESFL RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|50363640|gb|AAT75625.1| glycyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 451

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 25/248 (10%), Positives = 56/248 (22%), Gaps = 31/248 (12%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           +   ++        + EK +         V     +  +I   +  VR  E      Y  
Sbjct: 209 REFEQMELEFFFNPSDEKDW--FSYWLNEVETFLQDKIQINKENYRVRSHEKDELAHYST 266

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYD---------------GLVSRFKGQNVPATGFSIG 354
                             V   G +D                  +  K            
Sbjct: 267 ATSDIEFKFPFGWGELWGVAHRGNFDLNAHQEASKQDLTYLDPTTNQKVLPHVIEPSVGV 326

Query: 355 ISRLIVALKSL-----------ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
              ++  L                       + P  I  M        + Q     L   
Sbjct: 327 ERMMLAILWQAYHEEDLGEGNSRIVMKLPYNLAPYQIAVMPLQKQQNDQAQALYSNLLNN 386

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               ++    + N G + +  D    P  I           + +++    +++   +   
Sbjct: 387 ---FDVTYDETGNVGKRYRRQDAIGTPFVITVDFDTPETNSVTVRERDSMEQVRINLDEL 443

Query: 464 ESWREARV 471
           E++ +A+ 
Sbjct: 444 EAYLKAKF 451


>gi|15618411|ref|NP_224696.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|16752543|ref|NP_444805.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33241851|ref|NP_876792.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|13633970|sp|Q9Z851|SYP_CHLPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|4376787|gb|AAD18640.1| Prolyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189180|gb|AAF38117.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33236360|gb|AAP98449.1| prolyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 568

 Score = 45.2 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG-VF 71
           +G         R+ +++++ IR      G   +  PLL  ++        E   ++G ++
Sbjct: 37  KGVYTYTPLLWRVVSKMMNIIREELNAIGGQELLLPLLHNAELWQHTGRWEAFTSEGLLY 96

Query: 72  SLQDDDGQWISLRY 85
           +L+D +G+   L  
Sbjct: 97  TLKDREGKSHCLAP 110



 Score = 40.6 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 3/132 (2%)

Query: 342 KGQNVPATGFSIGISRLIVAL-KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                   G    ++  +  L                + I     D+ S    +     L
Sbjct: 439 CWMGTYGIGVGRTLAACVEQLADDRGIVWPKALAPFSITIAFNGGDTVSQELAETIYHEL 498

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           ++ G    +     +  G +LK +D    P  +I G   +S G+ +I+    G++ +   
Sbjct: 499 QSQGYEPLLDDRDER-LGFKLKDSDLIGIPYKLILGKSYQSSGIFEIES-RSGEKYTVSP 556

Query: 461 KNNESWREARVA 472
           +   +W +  +A
Sbjct: 557 EAFPTWCQNHLA 568


>gi|331225507|ref|XP_003325424.1| hypothetical protein PGTG_07257 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309304414|gb|EFP81005.1| hypothetical protein PGTG_07257 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 671

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 1/71 (1%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           VLI  +          +  ++ LR AGI + +   S+ + G +    D    P  I    
Sbjct: 600 VLIVPLSGTEVFRPLIRSISKKLRNAGIASRVD-DSNASIGKRYSRNDELGTPFGITVDF 658

Query: 438 GERSRGMLQIK 448
           G    G + ++
Sbjct: 659 GSVKNGTVTLR 669


>gi|255327243|ref|ZP_05368317.1| glycine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295523|gb|EET74866.1| glycine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 459

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +   ++           LR  G+   +    +   G + +  D    P  I      
Sbjct: 369 VLPLSKKAELSEPATKLANELR--GLW-NVDYDEAGAIGRRYRRQDEIGTPFCITVDFDT 425

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                + I++     +    +   +S+  AR+A
Sbjct: 426 LEDQAVTIRERDTMNQERVALDQVKSYLAARLA 458


>gi|254503680|ref|ZP_05115831.1| threonyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439751|gb|EEE46430.1| threonyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 703

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 44/373 (11%), Positives = 105/373 (28%), Gaps = 17/373 (4%)

Query: 102 IVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIK 161
                  ++    ++  +             +           A     M     A    
Sbjct: 321 HPKGWDIFQNLIAYKRRRLKDDYKEVNAPQVLHTSLWETSGHWAWYKDNMFSVQCADPES 380

Query: 162 RNDYHI---GINNRKILDGILEKIGLHGDDKLNERLI--VLRAIDKLDKFGLQGVKLLLG 216
            +D       +N    ++     +  + D  L       V R        GL  V+    
Sbjct: 381 EDDRIFALKPMNCPGHVEIFKHGLKSYRDLPLRMAEFGVVHRYEPSGAMHGLMRVRG--- 437

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNEL 272
               D++  F     +  E + I    LS+  +    E+   +          ++ ++  
Sbjct: 438 -FTQDDAHVFCTEEQMAEECLKINDLILSVYEDFGFEEIVVKLSTRPEKRVGSDEVWDHA 496

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
             +   V K+    +  +I + I+ G   + G  +E  L   +  + Q            
Sbjct: 497 EAVMTSVLKTIEEQSEGRIKTDILPGEGAFYGPKFEYTLKDAIGRDWQCGTTQVDFNLPE 556

Query: 333 RYDGLVSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDS 389
           R+        G+            G     + +     + +      P+ I      S++
Sbjct: 557 RFGAFYVDNNGEKKVPVMIHRAICGSMERFLGILIENYAGHFPLWFAPLQIVVATITSEA 616

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
            S  Q    +L++ G++ E     ++    +++       P+ ++ G  E     + I+ 
Sbjct: 617 DSYGQEVADLLKSKGLKVETDF-RNEKINYKVREHSLAKVPVILVCGMREAEERTVNIRR 675

Query: 450 LAKGKELSREIKN 462
           L    +    +  
Sbjct: 676 LGSKNQTPMGLDE 688


>gi|221231165|ref|YP_002510317.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225853864|ref|YP_002735376.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|254782918|sp|B8ZKT3|SYP_STRPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|254782920|sp|C1CC55|SYP_STRZJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|220673625|emb|CAR68112.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225723520|gb|ACO19373.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|332076711|gb|EGI87173.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPTLLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|149017957|ref|ZP_01834416.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147931521|gb|EDK82499.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPTLLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|290579880|ref|YP_003484272.1| putative prolyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996779|dbj|BAH87380.1| putative prolyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 616

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I + +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYSYLPLAHRVIEKIKEIMREEFDKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY 85
           ++ D     L  
Sbjct: 97  KNRDQSDFILGP 108


>gi|326202063|ref|ZP_08191933.1| LOW QUALITY PROTEIN: glycyl-tRNA synthetase [Clostridium
           papyrosolvens DSM 2782]
 gi|325987858|gb|EGD48684.1| LOW QUALITY PROTEIN: glycyl-tRNA synthetase [Clostridium
           papyrosolvens DSM 2782]
          Length = 462

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/232 (9%), Positives = 54/232 (23%), Gaps = 11/232 (4%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            +        +  L    +     +    EL         +                   
Sbjct: 240 KYWKDFCYNWLLSLNMTKENLKLRDHEKEELSHY-----SNATTDIEFLFPFGWGELWGI 294

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                ++  L   + + K     F            +    G +     F          
Sbjct: 295 ADRTDFD--LKQHMTHAKDDLSYFDPTTNEKYVPYCIEPSLGADRVTLAFLCDAYNEEEV 352

Query: 362 LK-SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
            +  + +       + PV I  +        + +    ML T     E     + + G +
Sbjct: 353 SEGDVRTVLRFHPAIAPVKIAVLPLSKKLGEEAEKVYHML-TKTFYCE--YDETGSIGKR 409

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +  D    P  I           + I++    +++  +I    ++ E +  
Sbjct: 410 YRRQDEIGTPYCITFDFDSLEDKSVTIRERDTMQQVRIKIDELAAYFENKFE 461


>gi|262306329|gb|ACY45757.1| his-tRNA synthetase [Artemia salina]
          Length = 149

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 20/156 (12%)

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
                AD+E   ++A  L+A+G+   D+ I IN+R ILDGI +  G+  D    +   V 
Sbjct: 3   YDTMIADSECVAIIASILKALGL--PDFTIKINHRLILDGIFDVCGVPVD----KFRTVC 56

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE--- 254
            ++DKLDK   + V+  + E              +  E  D +  ++ ++  K + +   
Sbjct: 57  SSVDKLDKSPWEEVRKEITE-----------QKGIAEEVADKIGKYVKLNGGKELIDELL 105

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK 290
             E +  + +G++G  E+ ++ +       + N + 
Sbjct: 106 ENEELNRSTSGKQGLEEMKLLLQYCDFLNVSQNVVF 141


>gi|169628792|ref|YP_001702441.1| glycyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169240759|emb|CAM61787.1| Glycyl-TRNA synthetase (GlyS) [Mycobacterium abscessus]
          Length = 472

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 33/113 (29%), Gaps = 21/113 (18%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  ++D   + +     LR +    +     +   G + +  D    P  +    
Sbjct: 379 VAVLPLSRNADLSPRAKALAAELRQS-WNVDFD--DAGAIGRRYRRQDEIGTPFCVTVDF 435

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                  + ++D                     + Q  IPI  +   + K L+
Sbjct: 436 DSLEDDSVTVRD------------------RDEMTQQRIPIGGVADHLAKTLK 470


>gi|326471753|gb|EGD95762.1| threonyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 511

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 12/120 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y+ YGF  + TP + Y  SL +           ++ +
Sbjct: 64  GSPLFRPNGTHILNKLITFLRAQYKQYGFREVLTPNI-YKQSLWEVSGHWQNYKDDMYEV 122

Query: 74  QDDDG----------QWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                          +   L+          + ++       P R     P+ RNE  G 
Sbjct: 123 GGRGDTGETSETSENEIYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGS 182


>gi|302653826|ref|XP_003018730.1| hypothetical protein TRV_07235 [Trichophyton verrucosum HKI 0517]
 gi|291182401|gb|EFE38085.1| hypothetical protein TRV_07235 [Trichophyton verrucosum HKI 0517]
          Length = 533

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 12/120 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y+ YGF  + TP + Y  SL +           ++ +
Sbjct: 86  GSPLFRPNGTHILNKLITFLRAQYKQYGFREVLTPNI-YKQSLWEVSGHWQNYKDDMYEV 144

Query: 74  QDDDG----------QWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                          +   L+          + ++       P R     P+ RNE  G 
Sbjct: 145 GGRGDTGETSDTSENEIYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGS 204


>gi|302499120|ref|XP_003011556.1| hypothetical protein ARB_02109 [Arthroderma benhamiae CBS 112371]
 gi|291175108|gb|EFE30916.1| hypothetical protein ARB_02109 [Arthroderma benhamiae CBS 112371]
          Length = 533

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 12/120 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y+ YGF  + TP + Y  SL +           ++ +
Sbjct: 86  GSPLFRPNGTHILNKLITFLRAQYKQYGFREVLTPNI-YKQSLWEVSGHWQNYKDDMYEV 144

Query: 74  QDDDG----------QWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                          +   L+          + ++       P R     P+ RNE  G 
Sbjct: 145 GGRGDTGEASETSENEIYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGS 204


>gi|284931433|gb|ADC31371.1| glycyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 463

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 7/65 (10%), Positives = 23/65 (35%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
               S+ + G + +  D       +        +G++ I++    +++   I   + W  
Sbjct: 399 FDFDSAGSIGKRYRRYDAIGTKYCLTYDFDSLEKGIVTIRERDSMEQIKLPISELKQWIR 458

Query: 469 ARVAQ 473
             + +
Sbjct: 459 NNLHE 463


>gi|242081969|ref|XP_002445753.1| hypothetical protein SORBIDRAFT_07g025100 [Sorghum bicolor]
 gi|241942103|gb|EES15248.1| hypothetical protein SORBIDRAFT_07g025100 [Sorghum bicolor]
          Length = 508

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 56/166 (33%), Gaps = 22/166 (13%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           +  V     QN  A         ++                  V++  + +     +  +
Sbjct: 270 EKGVREMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPKVAPIQVIVIAVPYKDADTTAIK 329

Query: 395 MYTQ----MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +     L  +GIRA+     + + G +  + + +  PL I  G  + +   ++I   
Sbjct: 330 GACESTVYTLNESGIRADQDTRENYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRI--- 386

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           R    A++ IP++ LV  VK +L E ++ +
Sbjct: 387 ---------------VRRDNGAKVDIPVTNLVEEVKVLLDEIQKNL 417


>gi|241889715|ref|ZP_04777013.1| glycyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863337|gb|EER67721.1| glycyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 457

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 8/216 (3%)

Query: 265 GEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324
            EK   +L +  E +R   ++   +   S     +E+     +  + G     +      
Sbjct: 241 CEKFLLDLGMTKENIRLRDHDKEELSHYSNATTDIEFKFPFGWGELWGIASRTDYDLKQH 300

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD 384
               G    Y  L +  K               L+  L    +     +     ++    
Sbjct: 301 MEHSGQDLTYQDLSTNEKFIPYCIEPSVGVDRVLLAFLCDAYNEEEVGENDTRTVLKFHP 360

Query: 385 HDSDSLSKYQMYTQMLRTAGIRA--------EMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
             +   +     ++ L    +           +    + + G + +  D    P  I   
Sbjct: 361 ALAPYKAAILPLSKKLSDKAVEVYQQLAVDFMVDFDETGSIGKRYRRQDEVGTPFCITYD 420

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
               + GM+ ++D    ++    I   + + E ++ 
Sbjct: 421 FESENDGMVTVRDRDTMEQTRIPITELKQYIEEKIK 456


>gi|168492219|ref|ZP_02716362.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183573637|gb|EDT94165.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|16124719|ref|NP_419283.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221233433|ref|YP_002515869.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|22654137|sp|Q9AAX8|SYT_CAUCR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783515|sp|B8GZS7|SYT_CAUCN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|13421637|gb|AAK22451.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220962605|gb|ACL93961.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 655

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
           +G      K   +   + D +R   +  G+  ++TP +    SL +     ++    +F 
Sbjct: 266 KGMVFWHPKGWALYRVLEDYMRRRLDAAGYKEVKTPQI-LDRSLWEKSGHAEKFGHAMFM 324

Query: 73  LQDDDGQWISLRYDLTAP 90
            +  +G+ ++++      
Sbjct: 325 CESAEGEVLAVKPMNCPG 342



 Score = 43.7 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 47/138 (34%), Gaps = 3/138 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                      + + L++   +         V++ T+  D+D     +   + L   G+R
Sbjct: 517 HRAILGSFERFIGILLENFAGALPVWLAPTQVVVATITSDAD--DYAREVVEKLTKLGMR 574

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
           AE+ L  ++    +++       P+  + G  E   G L ++ L    +    ++     
Sbjct: 575 AELDL-RNEKINYKIREHSLAKVPVIAVVGRKEAETGQLALRRLGGEGQSVLSLEEALRV 633

Query: 467 REARVAQITIPISELVST 484
            ++      +  +  V  
Sbjct: 634 LKSDATPPDVARALAVQE 651


>gi|227890230|ref|ZP_04008035.1| prolyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849232|gb|EEJ59318.1| prolyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 565

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 31/103 (30%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + I    +N     +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAENIIEEEMDNINVPEMIMPHLLPA-TLWQESGRYKKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           QD  G+   L    + T      VA+N  +             
Sbjct: 97  QDRHGRESLLGPTHEET--FTEIVAKNLKSYKQMPLALYQIQT 137



 Score = 37.9 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 3/104 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    I      LI     D       +   + L +A     ++   ++  G +   AD 
Sbjct: 463 AWPKEIAPFAIHLIQMKMKDETQTELAEKLEKEL-SAKYDV-LYDDRNERPGVKFNDADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              PL I  G      G++++K     K     I + ++     
Sbjct: 521 VGAPLRITIGRK-AKDGIVEVKRPMDEKATEVNISDLDAVITKE 563


>gi|160889627|ref|ZP_02070630.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492]
 gi|317479178|ref|ZP_07938315.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156860619|gb|EDO54050.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492]
 gi|316904666|gb|EFV26483.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 646

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 41/382 (10%), Positives = 92/382 (24%), Gaps = 28/382 (7%)

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
           ARY  +         +   I      +             + +              +  
Sbjct: 286 ARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYK 345

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
                         +  +  R    G + +    G+     R+      D         V
Sbjct: 346 N---------SPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQV 396

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           K          S  F        E    +   ++ +      E +E  +  I        
Sbjct: 397 KDEFLRVMDIISIVFESMDFENFEAQISLRDKVNREKYIGSDENWEKAERAIIEACEEKG 456

Query: 272 LVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           L    E    + Y       +   I R  +  T    +     P   + +          
Sbjct: 457 LKAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDYNLPERFQLEYTGA------ 507

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
               D    R    +    G    + R +  L    +    +  + P  +  +       
Sbjct: 508 ----DNQKHRPVMVHRAPFGS---MERFVAVLIEHTAGKFPLW-LTPDQVAILPISEKFN 559

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  Q L+   IRA +    ++  G +++  + +  P  ++ G  E     + ++  
Sbjct: 560 DYAHEVKQYLKRYDIRAIVD-ERNEKIGRKIRDNEMKRIPYMLVVGEKEAENKEVAVRKQ 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            +G + + + +         V 
Sbjct: 619 GEGDKGTMKFEEFAKKMNEEVQ 640


>gi|149006018|ref|ZP_01829747.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147762374|gb|EDK69335.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|320096236|ref|ZP_08027820.1| proline--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319976817|gb|EFW08576.1| proline--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 594

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   +I   +R   +  G   +  P L  ++   K     +     +F L
Sbjct: 40  GIYTWLPLGLRTLRKIEGIVREEMDRMGAQEVHFPGLIPAEPY-KATNRWEDYGPTLFKL 98

Query: 74  QDDDGQWISLRY 85
            D  G    L  
Sbjct: 99  ADRKGGDYLLAP 110


>gi|325102964|ref|YP_004272618.1| glycyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324971812|gb|ADY50796.1| glycyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 490

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 9/110 (8%), Positives = 25/110 (22%), Gaps = 3/110 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              + +       +  +        K +     L               + G + +  D 
Sbjct: 378 LHLHPVLAPYKAAVLPLTKKDGLPEKAREIMNRL-KLDYNVT--YDEKDSIGKRYRRQDA 434

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              P  I           + I+     ++    I + +      V+   +
Sbjct: 435 IGTPFCITVDHQSLEDNTVTIRHRDSMEQERISIADLDRIIGELVSWKNV 484


>gi|311893995|dbj|BAJ26403.1| putative prolyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 556

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 5/100 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R+R+++    R+ +E  GF+ +  P L+ S +L +              +
Sbjct: 45  GVHTLLPLGLRVRDQLDRITRDAFERNGFNSLALPTLQ-SRTLWEESGRWKVYTAEGALV 103

Query: 74  QDD-DGQWISLRY---DLTAPLARYVAENFDTIVFPCRTY 109
                G  + L     ++     R    +   +       
Sbjct: 104 TTRVGGADMCLAPTSEEMATATVRSHLRSHRDLPVRLTLN 143


>gi|295698321|ref|YP_003602976.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157332|gb|ADD79777.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 414

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 35/116 (30%), Gaps = 5/116 (4%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
            D    +     +           + + ++              + +  +      ++  
Sbjct: 269 IDQKNKKQHPMIIHRAILGSIERFIGILIEHYSGYLPTWLSP--IQVVVISVSKKYINFS 326

Query: 394 QMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           +   Q ++ AGIR    L + K N    ++       P  ++ G  E   G + I+
Sbjct: 327 KKIVQRIKYAGIRVYHDLKNEKINLK--IRKHSINKIPYIVLCGEKEEKTGSVSIR 380



 Score = 43.7 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + I   +   IR   + Y +  ++TP +    SL K         K +F +
Sbjct: 36  GSVFWNPNGLIIFQELKRYIRLKLKEYQYQEVKTPEI-LHKSLWKKTGHLQNYEKYMFKV 94

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
             +  +   L+        +   +   +    P R    G   RNE  G   
Sbjct: 95  SSES-RKYCLKPMNCPGHIKIFQQKIRSYRDLPLRIAEFGNCHRNELSGSLH 145


>gi|262403446|ref|ZP_06080004.1| threonyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349950|gb|EEY99085.1| threonyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 642

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 40/365 (10%), Positives = 90/365 (24%), Gaps = 11/365 (3%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                  + +     +        +      AD +     +  +Y I   N      I  
Sbjct: 284 QKLNEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHIQIFN 343

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     +  E    +
Sbjct: 344 QGLKSYRDLPLRMAEFGSCHRNEPSGSLHGI-MRVRGFTQDDAHIFCTEDQIQQEVTSCI 402

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                         +   +        G +E+   SE        +  I        G  
Sbjct: 403 KMVYDTYTTFGFQNIVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAMEIPFEIQEGEGAF 462

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGI 355
           Y     +        ++   +              G  Y G  +      +        +
Sbjct: 463 YGPKIEFTLY---DCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSL 519

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R I  L    +            +     D  +        Q L+  GIRA+  L  ++
Sbjct: 520 ERFIGILIEEYAGFFPTWLAPEQAVVVNITDKQA-DYAHEVAQKLQKCGIRAKADL-RNE 577

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +++    +  P  ++ G  E   G + ++          ++ +     +A +    
Sbjct: 578 KIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIKHIQAEIVSRK 637

Query: 476 IPISE 480
           + + E
Sbjct: 638 LNLEE 642



 Score = 41.0 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/167 (8%), Positives = 43/167 (25%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSVFRDLEIFIRQKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V      +       K
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK 420


>gi|255293004|dbj|BAH90101.1| glycyl-tRNA synthetase [uncultured bacterium]
          Length = 492

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/183 (8%), Positives = 42/183 (22%), Gaps = 10/183 (5%)

Query: 295 IVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG 354
                       ++         ++++   F           ++    G       F + 
Sbjct: 309 WGELEGIANRTDFDLSTHGEHSGKEKQMQYFDQQANERWTPYVIEPSAGLTRSLMAFMVD 368

Query: 355 ISRLIVALKSLESST-------NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA 407
                 A  +   +        +       V +  +  +     K +     LR      
Sbjct: 369 TYAEEEAPNAKGGTDIRTVLKLDKRLAPVKVAVLPLSRNEQLSPKAKDLAAALRK-NWNV 427

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           +     ++  G + +  D    P  I           + I+D     +    +   E + 
Sbjct: 428 DFD--DAQAIGRRYRRQDEIGTPYCITVDFETLEDQAVTIRDRDTMAQERVALDQVEGYL 485

Query: 468 EAR 470
             R
Sbjct: 486 AQR 488


>gi|300361905|ref|ZP_07058082.1| proline--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354524|gb|EFJ70395.1| proline--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 565

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + I     N     +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAENIIEEEMNNINVPEMIMPHLLPA-TLWQESGRYKKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           QD  G+   L    + T      VA+N  +             
Sbjct: 97  QDRHGRESLLGPTHEET--FTEIVAKNLKSYKQMPLALYQIQT 137


>gi|218900065|ref|YP_002448476.1| glycyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218541497|gb|ACK93891.1| glycyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 458

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 223 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|126696297|ref|YP_001091183.1| ATP phosphoribosyltransferase regulatory subunit [Prochlorococcus
           marinus str. MIT 9301]
 gi|126543340|gb|ABO17582.1| possible Histidyl-tRNA synthetase [Prochlorococcus marinus str. MIT
           9301]
          Length = 383

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 83/186 (44%), Gaps = 11/186 (5%)

Query: 37  YENYGFDPIETPLLEYSDSL-GKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYV 95
           Y+ +G++ +    +   +++ G+ + DE++    V          + LR ++T  + +  
Sbjct: 26  YKLWGYEEVSPSFINTLETIKGRGVIDENQVVGIV------SNNSLCLRPEMTTSIVKLS 79

Query: 96  AENFDTIVFPCRTYRIGPVFRNEKHGPGRF--RQFIQCDVDNVGSSAETADAEMCMMMAD 153
           +        P R +  G VF  +++    F  ++ +Q  ++ +G   +  + E+  ++ D
Sbjct: 80  STRLINKKRPIRLFTNGMVFDKKQNNKNSFKLQEKLQSGIELIGYDTKYPEIEVINILFD 139

Query: 154 TLEAVGIKRN-DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           +++ + +K   +  + ++  KI+D IL K   +  +++ + L+     D L K  +    
Sbjct: 140 SIDNINLKDGCNLFLLVSTTKIMDLILNKYKNNNFEEIKKCLVNFD-QDNLSKLRIDEND 198

Query: 213 LLLGEG 218
             + + 
Sbjct: 199 KYILKD 204


>gi|62078771|ref|NP_001014042.1| probable threonyl-tRNA synthetase 2, cytoplasmic [Rattus
           norvegicus]
 gi|54035500|gb|AAH83878.1| Threonyl-tRNA synthetase-like 2 [Rattus norvegicus]
          Length = 553

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  Y    F  + +P + Y+  L +        +  +F+  D +
Sbjct: 412 FLPRGAFIYNTLMDFIREEYHKRNFTEVLSPNM-YNSKLWETSGHWQHYSNNMFTF-DIE 469

Query: 78  GQWISLRYDLTAPLARYVAEN 98
               +L+           A  
Sbjct: 470 KDTFALKPMNCPGHCLMFAHR 490


>gi|65316905|ref|ZP_00389864.1| COG0423: Glycyl-tRNA synthetase (class II) [Bacillus anthracis str.
           A2012]
 gi|228917544|ref|ZP_04081089.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228936204|ref|ZP_04099004.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228981598|ref|ZP_04141894.1| Glycyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228988159|ref|ZP_04148257.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229124457|ref|ZP_04253644.1| Glycyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229141633|ref|ZP_04270164.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229158516|ref|ZP_04286576.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|229199064|ref|ZP_04325747.1| Glycyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228584335|gb|EEK42470.1| Glycyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228624952|gb|EEK81719.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228641831|gb|EEK98131.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228659005|gb|EEL14658.1| Glycyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228771570|gb|EEM20038.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228778083|gb|EEM26354.1| Glycyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228823451|gb|EEM69283.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228842111|gb|EEM87213.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 455

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 220 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFP 279

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 280 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 339

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 340 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 396

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 397 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 454


>gi|332830447|gb|EGK03075.1| threonyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 650

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 32/94 (34%), Gaps = 1/94 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +                 +  GI +++    ++  G +++  + +  P  +I G  
Sbjct: 548 QVVILPISEKFNDYAHRVNSYFKQQGISSQVD-DRNEKIGRKIRDNELKRIPYLLIVGEK 606

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           E     + ++   +G + S +  N  +     V 
Sbjct: 607 EAETEEVSVRKQGEGDKGSMKFTNFAAQLNEEVE 640



 Score = 37.9 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 18/38 (47%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL 50
           +G      +  ++R ++ D ++ I   + +  + TP +
Sbjct: 261 KGLPLWLPRGTQLRLKLEDFLKKIQRKFDYQQVMTPHI 298


>gi|303255041|ref|ZP_07341117.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302597871|gb|EFL64941.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|268319258|ref|YP_003292914.1| hypothetical protein FI9785_773 [Lactobacillus johnsonii FI9785]
 gi|262397633|emb|CAX66647.1| proS [Lactobacillus johnsonii FI9785]
          Length = 565

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 31/103 (30%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + I    +N     +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAENIIEEEMDNINVPEMIMPHLLPA-TLWQESGRYKKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           QD  G+   L    + T      VA+N  +             
Sbjct: 97  QDRHGRESLLGPTHEET--FTEIVAKNLKSYKQMPLALYQIQT 137



 Score = 37.9 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 3/104 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    I      LI     D       +   + L +A     ++   ++  G +   AD 
Sbjct: 463 AWPKEIAPFAIHLIQMKMKDETQTELAEKLEKEL-SAKYDV-LYDDRNERPGVKFNDADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              PL I  G      G++++K     K     I + ++     
Sbjct: 521 VGAPLRITIGRK-AKDGIVEVKRPMDEKATEVNISDLDAVITKE 563


>gi|15827147|ref|NP_301410.1| threonyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229625|ref|YP_002503041.1| threonyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|2501058|sp|O07151|SYT_MYCLE RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|254783529|sp|B8ZUG9|SYT_MYCLB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|2193902|emb|CAB09620.1| ThrS [Mycobacterium leprae]
 gi|13092695|emb|CAC29964.1| threonyl-tRNA synthetase [Mycobacterium leprae]
 gi|219932732|emb|CAR70549.1| threonyl-tRNA synthetase [Mycobacterium leprae Br4923]
          Length = 702

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 43/114 (37%), Gaps = 9/114 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  +    + +S  +     L++ G+R E+ +   +     +++ + +  P  +
Sbjct: 587 WLAPIQVVGIPVTGEHVSYLEEVAAQLKSCGVRTEVDVSDDRMAKKIVRHTN-QKVPFML 645

Query: 434 IQGTGERSRGMLQIKDLAKGKEL-----SREIKNNESWREARVAQITIPISELV 482
           + G  +   G +  +      ++        ++    W   R      P +ELV
Sbjct: 646 LAGDRDVRTGSVSFR-FGDRTQINGVARDSAVEAIVCWIVDRENDF--PTAELV 696


>gi|148983669|ref|ZP_01816988.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923816|gb|EDK74928.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301799407|emb|CBW31944.1| prolyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|114047517|ref|YP_738067.1| threonyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123326545|sp|Q0HV45|SYT_SHESR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113888959|gb|ABI43010.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp.
           MR-7]
          Length = 642

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/205 (8%), Positives = 57/205 (27%), Gaps = 11/205 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+    + +  +++        +   +   +                 +       
Sbjct: 314 SEAMFT-TSSENREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   ++  +               +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVQAEVSSCI--------QMVYDTYSTFGFENIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGV 211
           + ++ +  +  RA + L +      
Sbjct: 425 EKRIGDDAMWDRAEEALKQALRAKN 449



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  M+         +   +  +  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E     + ++       +       E +      QI++   +L+  
Sbjct: 595 VVGDQEMENKEVAVR---TRDGVDLGKMRIEDFAAKIHQQISLRSLKLLEE 642


>gi|42519365|ref|NP_965295.1| prolyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81832202|sp|Q74IS2|SYP_LACJO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|41583653|gb|AAS09261.1| prolyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 565

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 31/103 (30%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + I    +N     +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAENIIEEEMDNINVPEMIMPHLLPA-TLWQESGRYKKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           QD  G+   L    + T      VA+N  +             
Sbjct: 97  QDRHGRESLLGPTHEET--FTEIVAKNLKSYKQMPLALYQIQT 137



 Score = 38.3 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 3/104 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    I      LI     D       +   + L +A     ++   ++  G +   AD 
Sbjct: 463 AWPKEIAPFAIHLIQMKMKDETQTKLAEKLEKEL-SAKYDV-LYDDRNERPGVKFNDADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              PL I  G      G++++K     K     I + ++     
Sbjct: 521 VGAPLRITIGRK-AKDGIVEVKRPMDEKATEVNISDLDAVITKE 563


>gi|15900198|ref|NP_344802.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|81855097|sp|Q97SR1|SYP_STRPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|14971734|gb|AAK74442.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|49478811|ref|YP_038935.1| glycyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|59798535|sp|Q6HBZ1|SYG_BACHK RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|49330367|gb|AAT61013.1| glycine--tRNA ligase (glycyl-tRNA synthetase, class II) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 458

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 223 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|41408814|ref|NP_961650.1| threonyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|73919807|sp|Q73WE4|SYT_MYCPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|41397173|gb|AAS05033.1| ThrS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 684

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 42/115 (36%), Gaps = 11/115 (9%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY-ADRRNCPLA 432
            + PV    +    + +   +     L++ G+R E+     +     + + A +   P  
Sbjct: 569 WLAPVQAVGIPVADEHVPYLESVAAQLKSYGVRVEVDASDDRMAKKIVHHTAQK--VPFM 626

Query: 433 IIQGTGERSRGMLQIKDLAKGKEL-----SREIKNNESWREARVAQITIPISELV 482
           ++ G  + + G +  +      ++        +     W   R  + ++P +ELV
Sbjct: 627 LLAGDRDVAAGAVSFR-FGDRTQINGVPRDSAVDAIVKWIADR--ENSVPSAELV 678


>gi|86137404|ref|ZP_01055981.1| threonyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85825739|gb|EAQ45937.1| threonyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 648

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 76/268 (28%), Gaps = 25/268 (9%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F     + SE    +     +  +   H     +        G +E   + E   
Sbjct: 392 DDGHIFCAEDQIESETAKFIAFLSKVYADLGFHNWTIKLSTRPEKRIGSDESWDLVEKAL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
                +   +       G  Y     +   +AI         Q                 
Sbjct: 452 GDACKAAGYEYELLEGEGAFYGPKLEFTLTDAIGRNWQCGTLQVDPNLPERLEANFIGAD 511

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            ++ +   +           + + ++              V++ ++  D+D         
Sbjct: 512 GNKHRPFMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSDAD--DYVHEVV 569

Query: 398 QMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
             L+ AG+RAE  + + K        + G           P+ +  G  E     + I+ 
Sbjct: 570 TELQAAGVRAEADIRNEKINYKVREHSLGK---------VPVILAIGHREVEERTVSIRR 620

Query: 450 LAKGKELSREIKNNESWREARVAQITIP 477
           L  G++ +  + + E+  +A   + T P
Sbjct: 621 L--GEKQT-RVDSLENVTKALGVEATAP 645


>gi|30264956|ref|NP_847333.1| glycyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|42784099|ref|NP_981346.1| glycyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|47530451|ref|YP_021800.1| glycyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|47566949|ref|ZP_00237666.1| glycyl-tRNA synthetase [Bacillus cereus G9241]
 gi|49187774|ref|YP_031027.1| glycyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|52140610|ref|YP_086219.1| glycyl-tRNA synthetase [Bacillus cereus E33L]
 gi|118480007|ref|YP_897158.1| glycyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165870894|ref|ZP_02215546.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167634943|ref|ZP_02393261.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167639989|ref|ZP_02398257.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170685642|ref|ZP_02876865.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707043|ref|ZP_02897500.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177652334|ref|ZP_02934837.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567164|ref|ZP_03020079.1| glycyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196032884|ref|ZP_03100297.1| glycyl-tRNA synthetase [Bacillus cereus W]
 gi|196040501|ref|ZP_03107801.1| glycine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196044021|ref|ZP_03111258.1| glycyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|206976453|ref|ZP_03237360.1| glycyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217962381|ref|YP_002340953.1| glycyl-tRNA synthetase [Bacillus cereus AH187]
 gi|218906113|ref|YP_002453947.1| glycyl-tRNA synthetase [Bacillus cereus AH820]
 gi|222098368|ref|YP_002532426.1| glycyl-tRNA synthetase [Bacillus cereus Q1]
 gi|225866890|ref|YP_002752268.1| glycyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817684|ref|YP_002817693.1| glycyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228929941|ref|ZP_04092954.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228942077|ref|ZP_04104618.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228948637|ref|ZP_04110915.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228975007|ref|ZP_04135567.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|229187155|ref|ZP_04314301.1| Glycyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229602508|ref|YP_002869159.1| glycine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254687247|ref|ZP_05151104.1| glycyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254725260|ref|ZP_05187043.1| glycyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254735416|ref|ZP_05193124.1| glycyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254740683|ref|ZP_05198374.1| glycyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254753055|ref|ZP_05205091.1| glycyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254761397|ref|ZP_05213418.1| glycyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|300117973|ref|ZP_07055730.1| glycyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|59798501|sp|Q632E8|SYG_BACCZ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|59798563|sp|Q72YG8|SYG_BACC1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|59798583|sp|Q81XT3|SYG_BACAN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|30259633|gb|AAP28819.1| glycine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|42740030|gb|AAS43954.1| glycyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|47505599|gb|AAT34275.1| glycyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|47556267|gb|EAL14601.1| glycyl-tRNA synthetase [Bacillus cereus G9241]
 gi|49181701|gb|AAT57077.1| glycyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|51974079|gb|AAU15629.1| glycine--tRNA ligase (glycyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|118419232|gb|ABK87651.1| glycyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|164713403|gb|EDR18928.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512070|gb|EDR87448.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529693|gb|EDR92442.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170128146|gb|EDS97016.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170670106|gb|EDT20846.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172082340|gb|EDT67406.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190561668|gb|EDV15638.1| glycyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195994313|gb|EDX58268.1| glycyl-tRNA synthetase [Bacillus cereus W]
 gi|196025357|gb|EDX64027.1| glycyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196028633|gb|EDX67240.1| glycine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|206745377|gb|EDZ56777.1| glycyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067915|gb|ACJ82165.1| glycyl-tRNA synthetase [Bacillus cereus AH187]
 gi|218535956|gb|ACK88354.1| glycyl-tRNA synthetase [Bacillus cereus AH820]
 gi|221242427|gb|ACM15137.1| glycine--tRNA ligase (glycyl-tRNA synthetase) [Bacillus cereus Q1]
 gi|225789327|gb|ACO29544.1| glycine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227002360|gb|ACP12103.1| glycine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228596324|gb|EEK53998.1| Glycyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228784712|gb|EEM32731.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228810944|gb|EEM57287.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228817593|gb|EEM63677.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228829717|gb|EEM75341.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229266916|gb|ACQ48553.1| glycine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|298724627|gb|EFI65312.1| glycyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|324328794|gb|ADY24054.1| glycyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
 gi|326942679|gb|AEA18575.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 458

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 223 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|302820128|ref|XP_002991732.1| hypothetical protein SELMODRAFT_134156 [Selaginella moellendorffii]
 gi|300140413|gb|EFJ07136.1| hypothetical protein SELMODRAFT_134156 [Selaginella moellendorffii]
          Length = 647

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   + N++L  IR+ Y   GFD + TP + Y+  L +         + +F  
Sbjct: 296 GSAFFLPKGTIVYNKLLQFIRSEYRKRGFDEVVTPNI-YNMKLWEQSGHAAHYKENMFVF 354

Query: 74  QDDDGQWISLRYDLTAP 90
           + +  Q   L+      
Sbjct: 355 EIEK-QEFGLKPMNCPG 370



 Score = 41.4 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 37/116 (31%), Gaps = 1/116 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y         + V      +G    + A+   ++       + P     +         
Sbjct: 529 SYSAEDEAKIERPVIIHRAILGSVERMFAILLEDNVGKWPFWLSPRQAIVLTISEKFKDY 588

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +     L  AG   ++ + S +    +++ A   +    ++ G  E+ +G ++ K
Sbjct: 589 AEEVRAKLHAAGFEVDVDV-SDRKVDKKVREAQMAHYNYLLVVGAMEQEKGEVRTK 643


>gi|270293969|ref|ZP_06200171.1| threonyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270275436|gb|EFA21296.1| threonyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 646

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 41/382 (10%), Positives = 92/382 (24%), Gaps = 28/382 (7%)

Query: 92  ARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMM 151
           ARY  +         +   I      +             + +              +  
Sbjct: 286 ARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYK 345

Query: 152 ADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGV 211
                         +  +  R    G + +    G+     R+      D         V
Sbjct: 346 N---------SPRSYKDLPLRLAEFGTVCRYEQSGELHGLTRVRSFTQDDAHIFCRPDQV 396

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           K          S  F        E    +   ++ +      E +E  +  I        
Sbjct: 397 KDEFLRVMDIISIVFESMDFENFEAQISLRDKVNREKYIGSDENWEKAERAIIEACEEKG 456

Query: 272 LVVISELVRKSGYNSN-RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
           L    E    + Y       +   I R  +  T    +     P   + +          
Sbjct: 457 LKAKIEYGEAAFYGPKLDFMVKDAIGRRWQLGT---IQVDYNLPERFQLEYTGA------ 507

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
               D    R    +    G    + R +  L    +    +  + P  +  +       
Sbjct: 508 ----DNQKHRPVMVHRAPFGS---MERFVAVLIEHTAGKFPLW-LTPDQVAILPISEKFN 559

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
                  Q L+   IRA +    ++  G +++  + +  P  ++ G  E     + ++  
Sbjct: 560 DYAHEVKQYLKRYDIRAIVD-ERNEKIGRKIRDNEMKRIPYMLVVGEKEAENKEVAVRKQ 618

Query: 451 AKGKELSREIKNNESWREARVA 472
            +G + + + +         V 
Sbjct: 619 GEGDKGTMKFEEFAKKMNEEVQ 640


>gi|225858114|ref|YP_002739624.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254782917|sp|C1CB39|SYP_STRP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|225721841|gb|ACO17695.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|329667116|gb|AEB93064.1| prolyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 565

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 31/103 (30%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + I    +N     +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAENIIEEEMDNINVPEMIMPHLLPA-TLWQESGRYKKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           QD  G+   L    + T      VA+N  +             
Sbjct: 97  QDRHGRESLLGPTHEET--FTEIVAKNLKSYKQMPLALYQIQT 137



 Score = 37.9 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 3/104 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    I      LI     D       +   + L +A     ++   ++  G +   AD 
Sbjct: 463 AWPKEIAPFAIHLIQMKMKDETQTELAEKLEKEL-SAKYDV-LYDDRNERPGVKFNDADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              PL I  G      G++++K     K     I + ++     
Sbjct: 521 VGAPLRITIGRK-AKDGIVEVKRPMDEKATEVNISDLDAVITKE 563


>gi|322390835|ref|ZP_08064345.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142505|gb|EFX37973.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 616

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 43/140 (30%), Gaps = 5/140 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKGIMRQEFEKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +G    L    + T   + R   +++  +       +       ++   G  R    
Sbjct: 97  KNREGSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQ-PKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMM 150
              D     A     ++   
Sbjct: 156 IMKDGYSFHANYDSLDVTYD 175



 Score = 37.5 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D  SL+      + L   G    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEASLALTDRIEEALVNKGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|302816171|ref|XP_002989765.1| hypothetical protein SELMODRAFT_130418 [Selaginella moellendorffii]
 gi|300142542|gb|EFJ09242.1| hypothetical protein SELMODRAFT_130418 [Selaginella moellendorffii]
          Length = 647

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   + N++L  IR+ Y   GFD + TP + Y+  L +         + +F  
Sbjct: 296 GSAFFLPKGTIVYNKLLQFIRSEYRKRGFDEVVTPNI-YNMKLWEQSGHAAHYKENMFVF 354

Query: 74  QDDDGQWISLRYDLTAP 90
           + +  Q   L+      
Sbjct: 355 EIEK-QEFGLKPMNCPG 370



 Score = 41.4 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 38/116 (32%), Gaps = 1/116 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y         + V      +G    + A+   +++      + P     +         
Sbjct: 529 SYSAEDEAKIERPVIIHRAILGSIERMFAILLEDNAGKWPFWLSPRQAIVLTISEKFKDY 588

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +     L  AG   ++ + S +    +++ A   +    ++ G  E+ +G ++ K
Sbjct: 589 AEEVRAKLHAAGFEVDVDV-SDRKVDKKVREAQMAHYNYLLVVGAMEQEKGEVRTK 643


>gi|261250893|ref|ZP_05943467.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937766|gb|EEX93754.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 642

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/263 (11%), Positives = 70/263 (26%), Gaps = 6/263 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   + +  E    +              +   +        G +E+   SE   
Sbjct: 383 DDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLSTRPEKRVGSDEIWDQSEEAL 442

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
           K    +  I        G  Y     +          +              G    D  
Sbjct: 443 KQSLEAMDIAYEIQEGEGAFYGPKIEFTLHDCLDRAWQCGTVQLDFNLPGRLGATYVDEN 502

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             R     +           + + ++                   M+         Q   
Sbjct: 503 NERQTPVMIHRAILGSLERFIGILIEEYYGFFPTWLSPEQA--VIMNITDKQSDYVQEVA 560

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
           Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E   G + ++         
Sbjct: 561 QKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPFMLVCGDQEMEAGEIAVRTRKGKDLGK 619

Query: 458 REIKNNESWREARVAQITIPISE 480
            ++ +  S+ +  ++   + + E
Sbjct: 620 FKVDDFISYIQDEISSRKLNLEE 642



 Score = 44.1 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 43/152 (28%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFVREKLTEYGYQEVKGPLIMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +  +L+        +   +   +                 +       
Sbjct: 315 AEAMFT-TSSENREYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   +   ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQEEVTSCIKMV 405


>gi|229828494|ref|ZP_04454563.1| hypothetical protein GCWU000342_00556 [Shuttleworthia satelles DSM
           14600]
 gi|229793088|gb|EEP29202.1| hypothetical protein GCWU000342_00556 [Shuttleworthia satelles DSM
           14600]
          Length = 465

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV +  +              + L +     E       N G + +  D    
Sbjct: 365 HFHPALAPVKVGVLPLSKKLAEGATKIYERL-SKKFNCE--YDDRGNIGKRYRRQDEIGT 421

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           P  +       + G + ++D    +++   I
Sbjct: 422 PFCVTYDFDSETDGAVTVRDRDSMEQVRLPI 452


>gi|228910750|ref|ZP_04074559.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228848701|gb|EEM93546.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 487

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 252 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFP 311

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 312 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 371

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 372 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 428

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 429 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 486


>gi|94989304|ref|YP_597405.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94993193|ref|YP_601292.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|114152260|sp|Q1J9R3|SYP_STRPB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|114152261|sp|Q1JJW2|SYP_STRPC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94542812|gb|ABF32861.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546701|gb|ABF36748.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 618

 Score = 45.2 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDNSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHHNYEDLDVTYEDYRQ 179



 Score = 37.5 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L   G        + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLTAKGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G+++IK  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEIKIKATGASIEVNAENLIETLEILTKE 617


>gi|302348192|ref|YP_003815830.1| Prolyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328604|gb|ADL18799.1| Prolyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 482

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 78/253 (30%), Gaps = 20/253 (7%)

Query: 257 ELVKGTIAGEKGFNELV-VISELVRKSGYNSNRIKISSTIVRGLEYYTG------CVYEA 309
            + K      + F +    + E +       + + I   I R  ++           ++ 
Sbjct: 159 SMFKEAHTVHESFEDAESQVKEAIDVYRKFFDSLGIPYIISRRPDWDKFAGALYTIAFDT 218

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KS 364
           ++      +       G          + +R +  + P         R++  L       
Sbjct: 219 VMPDGRTLQIGTVHNLGQNFTKAFSFRIQTRDEKFDYPWQTSYGVSDRVVATLIAIHGDD 278

Query: 365 LESSTNNIKEMGPVLITTMDHDSD-----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           +             +I  +   S+      L   +     L ++GIRA++        G+
Sbjct: 279 MGLVLPPDIAPTQAVIIPIPSQSEEDSRKVLEYSRGVLSTLLSSGIRAKLDDREDTTPGD 338

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +  Y D +  P+ +  G  E S   + I      ++ +  +       +    +I+   +
Sbjct: 339 KYYYWDAKGVPVRVEIGPREASGNTVTIVRRDTLEKRTVPLSEAVGSIKKTFDEIS---A 395

Query: 480 ELVSTVKKILQEN 492
            L+   +K L ++
Sbjct: 396 YLIERARKFLADH 408



 Score = 37.5 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +IR R+ D +R + +  G + +  PLL     L K           V
Sbjct: 33  PVKGMGVWMPYGFQIRRRVTDLLRKLLDETGHEEVLFPLLIPDWMLAKESEHVKGFEDEV 92

Query: 71  FSLQDDDG-----QWISLRY 85
           +      G     Q ++LR 
Sbjct: 93  Y-WVTHGGLEELDQKLALRP 111


>gi|301793532|emb|CBW35907.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 617

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  +E  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|229112357|ref|ZP_04241895.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228671005|gb|EEL26311.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 487

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 252 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMSEESMRLRDHGEEELSHYSNATTDIEFKFP 311

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 312 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 371

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 372 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 428

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 429 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEQKIQ 486


>gi|210616236|ref|ZP_03291016.1| hypothetical protein CLONEX_03237 [Clostridium nexile DSM 1787]
 gi|210149902|gb|EEA80911.1| hypothetical protein CLONEX_03237 [Clostridium nexile DSM 1787]
          Length = 191

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 13/171 (7%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           + +    E ++G +  E   + L +I   V  +     ++    T+VRG+ YYTG ++E 
Sbjct: 13  EGVRYCKEKLEGFLEAETA-DGLEMIISSVESAKEAEFKVSFDPTLVRGMSYYTGTIFEI 71

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                           GSVGGGGRYD ++ +F GQ  PA GFSIG  R+++ L       
Sbjct: 72  ----------SMDEFGGSVGGGGRYDEMIGKFTGQPTPACGFSIGFERIVMLLLERG-YK 120

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE-MFLGSSKNFGN 419
                    L+      ++ + K     +  R  G +   + +  +K F  
Sbjct: 121 VPTSREKKALLIEKGMSAEGMLKILAIAKEERANGKQVMLVNMKKNKKFQK 171


>gi|171742466|ref|ZP_02918273.1| hypothetical protein BIFDEN_01578 [Bifidobacterium dentium ATCC
           27678]
 gi|171278080|gb|EDT45741.1| hypothetical protein BIFDEN_01578 [Bifidobacterium dentium ATCC
           27678]
          Length = 547

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 29/97 (29%), Gaps = 2/97 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  S  Q     LR       +    +   G + +  D    PL +      
Sbjct: 426 VLPLSKKPELQSVAQNLADDLRQHDW--MIDYDEAGAIGRRYRREDEIGTPLCVTVDFDT 483

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                + I++    ++    +     +  AR+ +  +
Sbjct: 484 LDDQAVTIRERDTMQQERVALDKVADYVAARIGEKHV 520


>gi|115438430|ref|XP_001218064.1| glycyl-tRNA synthetase 1 [Aspergillus terreus NIH2624]
 gi|114188879|gb|EAU30579.1| glycyl-tRNA synthetase 1 [Aspergillus terreus NIH2624]
          Length = 656

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 10/119 (8%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VLI  +   +      Q     LR  GI   +   SS + G   +YA  D    P  
Sbjct: 539 PTKVLIVPLSTHASFKPLSQRLMMKLRRMGISNRVD-DSSASIGK--RYARNDELGTPFG 595

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           I             ++D    K++           ++ V        E    V+K L E
Sbjct: 596 ITVDFQSVKDNTFTLRDRDSTKQVRASEDEIVQALKSLVEG-----EETWEDVRKRLPE 649


>gi|27904721|ref|NP_777847.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|46396631|sp|Q89AN7|SYP_BUCBP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|27904118|gb|AAO26952.1| prolyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 574

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 41/158 (25%), Gaps = 8/158 (5%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G        +RI  +++  I+N  +  G   I  P L+  + L           + +F 
Sbjct: 37  SGTYIWLPTGLRILKKVIRIIKNEMKQCGAMEIAMPFLQKKN-LWDLSKRVITYGQELFQ 95

Query: 73  LQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           + D   +   L     ++      Y  +N                 +       RF    
Sbjct: 96  VTDRTNKKFILGPTHEEMIT----YFIKNELQSYKQLPLILYQIQTKFRDEIRPRFGIIR 151

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
             +     + +   +        + +    IK      
Sbjct: 152 TKEFMMKDAYSFHINMLSLEKTYNLMYQTYIKIFKKMK 189


>gi|301106649|ref|XP_002902407.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262098281|gb|EEY56333.1| prolyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 764

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/257 (12%), Positives = 70/257 (27%), Gaps = 33/257 (12%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI----SSTIVRGLEYYTGCVYEAI 310
             E        E+   E+  + +           + +     +   +          E  
Sbjct: 416 WQEGHTAHATKEEADEEVRAVLDFYAACYEELLAVPMIKGVKTEKEKFAGADYTTTIEGF 475

Query: 311 LGFPVMN-----EKQKPVVFGSVGG-GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKS 364
           +                  FG + G    Y+        QN            ++V    
Sbjct: 476 IPATGRGIQAATSHMLGQNFGKMFGITAEYEDGKKLIPWQNSWGFTTRSLGVMIMVHGDD 535

Query: 365 LESSTNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                        V++  +     D   +  +K       L  AG+R E         G 
Sbjct: 536 KGLVLPPRVAPTQVIVVPIPFKNQDEVEEIFAKADEIVAKLADAGVRIEADKRCVYTPGW 595

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +  + + +  PL    G  + ++  +++                   R    A+  IP +
Sbjct: 596 KYNHWELKGVPLRFEVGPKDIAKKQVRV------------------VRRDNGAKEDIPEA 637

Query: 480 ELVSTVKKILQENKEEI 496
           EL + +  +L++ ++E+
Sbjct: 638 ELATRIPALLEQIQQEM 654


>gi|282880410|ref|ZP_06289121.1| glycine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305766|gb|EFA97815.1| glycine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 514

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/279 (10%), Positives = 70/279 (25%), Gaps = 30/279 (10%)

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           G    +E +     F   + E+   + +      +   K + EL +        G  + R
Sbjct: 245 GKAFRNEIVARQFIFRMREFEQMEMQFFVKPGTELEWFKRWKELRMAWHQALGFGAENYR 304

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFP----VMNEKQKPVVFGSVGGGG--RYDGLVSRFK 342
                 +       T   ++   GF     V +     +       G   +Y    +   
Sbjct: 305 FHDHEKLAHYANAATDIEFKMPFGFKEVEGVHSRTNFDLSQHEKFSGKSIKYFDPETNES 364

Query: 343 GQNVPATGFSIGISRLIVAL------KSLESSTNNIK-------EMGPVLITTMDHDSDS 389
                           +  +      + LE     I              +  +      
Sbjct: 365 YVPYVIETSIGVDRMFLSVMCHSYQEEELEGGDKRIVLRLPAALAPVKCAVMPLVRKEGL 424

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
             K +    +L               + G + +  D    P  +           + ++ 
Sbjct: 425 PEKAREIVNLL---KFHFNTSYDEKDSIGKRYRRQDAVGTPYCVTVDFDTLKDNKVTLRH 481

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
               ++   +I    +  E +V+        +VS +KK+
Sbjct: 482 RDTMQQERIDISELCAHIEDKVS--------IVSLLKKL 512


>gi|121701845|ref|XP_001269187.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119397330|gb|EAW07761.1| prolyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 553

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 85/256 (33%), Gaps = 27/256 (10%)

Query: 236 QIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI 295
           +   +   L      +    Y ++        G N LV + +  +        +K  + +
Sbjct: 324 KRPPLSDLLQQASCTADEIQYSMLNRFPGTNHGLN-LVKVQDGDKCIKCTEGSLKTHTAV 382

Query: 296 VRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGI 355
             G  ++ G  Y  +L   VM      V     GG  +   +  +     +  +     +
Sbjct: 383 ELGHTFHLGTRYSEVLQASVM------VDQSLSGGAAKDQQVPMQMGCHGIGVSRMISAV 436

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           +  +   K L      +     V++     ++++   Y +     +++ I   +     K
Sbjct: 437 ADNLADSKGLN-WPRAMAPYEVVVVPGKGLETEAEKVYDLLASK-QSSPIDTILDDRE-K 493

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +L  AD    P+ I+ G G + +  L++                   R     +  
Sbjct: 494 PMGWKLSDADLIGYPVIIVVGKGWKKQQTLEV-----------------QCRRLDNLREE 536

Query: 476 IPISELVSTVKKILQE 491
           +P+ +L + V+ +L+ 
Sbjct: 537 VPLDQLPAFVRSLLER 552


>gi|325851859|ref|ZP_08171024.1| glycine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325484701|gb|EGC87614.1| glycine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 515

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/234 (7%), Positives = 48/234 (20%), Gaps = 29/234 (12%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP------VMNEKQKPVVFG 326
                     G      +                 E  + F       + +     +   
Sbjct: 287 KHRLAWHEALGMGDENYRFHDHEKLAHYANAATDIEFHMPFGFKEVEGIHSRTDFDLSQH 346

Query: 327 SVGGGGRYDGLVSRFKGQNVP-----------ATGFSIGISRLIVALKS----LESSTNN 371
               G +             P                +  S     L++    +      
Sbjct: 347 EKFSGRQIKYFDPERNESYTPYDVETSIGVDRMFLSVMCHSYTEEQLENGSSRVVLKLPE 406

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  + +      K Q     L          + +  + G + +  D    P 
Sbjct: 407 PLAPVKCAVLPLVNKDGLPEKAQEIVNSL---KFHFNTHMEAKDSIGKRYRRQDAIGTPF 463

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
            +       +   + ++     K+    ++      E R     + I+ L+  +
Sbjct: 464 CVTVDGDTLNDNTVTLRYRDSMKQERVPVEKLRGIIEDR-----VSITSLLKKI 512


>gi|322699026|gb|EFY90791.1| glycyl-tRNA synthetase 1 [Metarhizium acridum CQMa 102]
          Length = 662

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 1/93 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            S         VLI  + +++      +  +Q LR AGI + +   SS + G +    D 
Sbjct: 533 LSFPPTVAPTKVLIVPLSNNTQFRPIIKKLSQQLRLAGISSRID-DSSASIGKRYSRNDE 591

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
              PL I           + ++D     ++  E
Sbjct: 592 LGTPLGITVDFQTLQDSTITLRDRDSTAQVRAE 624


>gi|302869265|ref|YP_003837902.1| glycyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302572124|gb|ADL48326.1| glycyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 459

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 25/93 (26%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  +     K +     LR      E     +   G + +  D    P  +    
Sbjct: 366 VAVLPLSRNEALSPKAKQLATDLRKR-WVVEFDDSQA--IGRRYRRQDEIGTPFCVTVDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++     +    +   E +   R
Sbjct: 423 DTLDDNAVTVRNRDTMTQERVSLDQVERYLIER 455


>gi|251792477|ref|YP_003007203.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247533870|gb|ACS97116.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 643

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 40/356 (11%), Positives = 93/356 (26%), Gaps = 8/356 (2%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +                D +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPIRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        ++  +        G +++   +E    +    N ++       G  
Sbjct: 402 RMVYDIYSTFGFTNIFVKLSTRPEKRIGADDMWDCAEEGLANALKHNGLEYEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     +          +    +       G      V+    +  P       +G    
Sbjct: 462 YGPKIEFALRDCLDREWQCG-TIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + P     M+         Q   + L  AG+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPTQAVVMNITDSQSEYVQDVAKKLSDAGLRVKTDL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +++    R  P  ++ G  E   G + ++     K         E + +    Q+
Sbjct: 580 FKIREHTLRRVPYMLVCGDKEIETGKVAVR---TRKGQDLGTFTVEEFLDVLKKQV 632



 Score = 40.2 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 12/167 (7%), Positives = 41/167 (24%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 GDLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   +  V    + +       K
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFTNIFVK 419


>gi|294892656|ref|XP_002774168.1| glycyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239879385|gb|EER05984.1| glycyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 674

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 33/111 (29%), Gaps = 10/111 (9%)

Query: 362 LKSLESSTN----NIKEMGPVLITTMDHDSDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKN 416
           ++  E         +     V +  +  +           T  L+  GI  ++   S + 
Sbjct: 540 MEDQELRCYLSLPPVVAPTKVSVLPISSNPTQFKPAMHKITDALKEHGISYKVD-DSGQA 598

Query: 417 FGNQLKYA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            G   +YA  D    P  I       +   + +++     ++   I +   
Sbjct: 599 IGK--RYARTDEIGIPFGITIDFQSLNDDTVTLRERDSMSQIRLPIADVAD 647


>gi|212635267|ref|YP_002311792.1| threonyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226701407|sp|B8CME8|SYT_SHEPW RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|212556751|gb|ACJ29205.1| Threonyl-tRNA synthetase, class IIa [Shewanella piezotolerans WP3]
          Length = 642

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 39/368 (10%), Positives = 94/368 (25%), Gaps = 14/368 (3%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                  + +     +        +      AD +     +  +Y I   N      I  
Sbjct: 283 QKLGQYTYQEVKGPLMMDRVLWERSGHWDKYADGMFTTNSESREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     +  E    +
Sbjct: 343 QGLKSYRDLPLRMAEFGCCHRNEPSGSLHGL-MRVRGFTQDDAHVFCTEEQVQQEVSACI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                         +   +        G +++   +E   K    SN I+       G  
Sbjct: 402 QMVYDTYETFGFKNIVVKLSTRPEKRIGDDDMWDRAEEALKQALKSNDIEFEILPGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGI 355
           Y     +        ++   +              G  Y    +  +   +        +
Sbjct: 462 YGPKIEF---TLHDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSL 518

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R +  L    +       + P  +  M+         +    + +  GIRA   L  ++
Sbjct: 519 ERFLGILIEEYAGKFP-TWLAPQQVVVMNITDKQSDYAEEVVNLFKEHGIRATKDL-RNE 576

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +++    R  P  ++ G  E     + ++     + +       + +      QI+
Sbjct: 577 KIGFKIREHTLRRVPYLLVVGDQEMENKEVAVR---TREGVDLGKMQIQEFATKLKNQIS 633

Query: 476 IPISELVS 483
           +    L+ 
Sbjct: 634 LRSLNLLE 641



 Score = 41.4 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/199 (8%), Positives = 54/199 (27%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
             G+F+   +  +  +++        +   +   +                 +       
Sbjct: 314 ADGMFTTNSES-REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   ++  +                      I+ K+    
Sbjct: 373 LMRVRGFTQDDAHVFCTEEQVQQEVSACI--------QMVYDTYETFGFKNIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++ +  +  RA + L +
Sbjct: 425 EKRIGDDDMWDRAEEALKQ 443


>gi|163801061|ref|ZP_02194961.1| threonyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159175410|gb|EDP60207.1| threonyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 642

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 75/265 (28%), Gaps = 10/265 (3%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F   + +  E    +              +   +        G +E+   SE   
Sbjct: 383 DDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLSTRPEQRVGSDEIWDQSEEAL 442

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYD 335
           K    S  I        G  Y     +        ++   +              G  Y 
Sbjct: 443 KQSLESMEIPYEIQEGEGAFYGPKIEFTLY---DCLDRAWQCGTVQLDFNLPGRLGATYV 499

Query: 336 GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM 395
           G  +      +        + R I  L    +            I  M+         Q 
Sbjct: 500 GENNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAPEQAIL-MNITDKQSDYVQE 558

Query: 396 YTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKE 455
             Q L+ +GIRA+  L  ++  G +++    +  P  ++ G  E   G + ++       
Sbjct: 559 VVQKLQKSGIRAKADL-RNEKIGFKIREHTLKRVPYMLVVGDQEMEAGEIAVRTRKGKDL 617

Query: 456 LSREIKNNESWREARVAQITIPISE 480
              ++ +  ++ +  +    + + E
Sbjct: 618 GKFKVDDFIAYIQDEIFSRKLNLEE 642



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 45/152 (29%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R+  + YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+   ++ +  +L+        +   +   +                 +       
Sbjct: 315 ADAMFTTASEN-REYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     ++++   +   ++ V
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQEEVTSCIKMV 405


>gi|77164649|ref|YP_343174.1| threonyl-tRNA synthetase, class IIA [Nitrosococcus oceani ATCC
           19707]
 gi|123757888|sp|Q3JC02|SYT_NITOC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|76882963|gb|ABA57644.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Nitrosococcus
           oceani ATCC 19707]
          Length = 644

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RIR  I D  +  +   G++ + TP + + + L +     D   + ++  
Sbjct: 262 GLVFWHPMGARIRRVIEDFWQERHTAAGYEMLYTPHIAHEE-LWQTSGHTDFYRESMYQP 320

Query: 74  QDDDGQWISLRYDLTA 89
            +DD Q   L+     
Sbjct: 321 MEDDHQLYQLKPMNCP 336



 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 1/77 (1%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + PV +  M          +   + +R  G R+ + L  ++  G +++    R  P 
Sbjct: 535 PPWLAPVQVVVMSITDRQEGYARQVEEAMRNKGFRSLLDL-RNEKIGFKIREHILRRIPY 593

Query: 432 AIIQGTGERSRGMLQIK 448
            ++ G  E +   + ++
Sbjct: 594 LLVIGDREVANQTVAVR 610


>gi|21911224|ref|NP_665492.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896602|ref|NP_802952.1| prolyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81847409|sp|Q8K5S7|SYP_STRP3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|21905437|gb|AAM80295.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811856|dbj|BAC64785.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 618

 Score = 45.2 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDNSDFILGPTHEETFTTLVRNAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHHNYEDLDVTYEDYRQ 179



 Score = 38.3 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L   G        + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G+++IK  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|312881548|ref|ZP_07741334.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370825|gb|EFP98291.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 642

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 38/348 (10%), Positives = 87/348 (25%), Gaps = 7/348 (2%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +      AD +     +  DY +   N      I  +      D       
Sbjct: 299 IMDRVLWERSGHWDKYADAMFTTASENRDYALKPMNCPGHVQIFNQGLKSYRDLPLRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F   + +  E    +              +
Sbjct: 359 FGSCHRNEPSGALHGI-MRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYETFGFSNI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G +E+   SE   K    +  I        G  Y     +        
Sbjct: 418 AVKLSTRPEKRVGSDEIWDESEQALKQSLEAMDIPYEIQEGEGAFYGPKIEFTLHDCLDR 477

Query: 316 MNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
             +              G    D    R     +           + + ++         
Sbjct: 478 AWQCGTVQLDFNLPGRLGATYVDENNERQVPVMIHRAILGSLERFIGILIEEYYGFFPTW 537

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                     M+             Q L+  GIRA+  L  ++  G +++    +  P  
Sbjct: 538 LSPEQA--IIMNITDKQSDYVHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYM 594

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++          ++ +  S+ +  ++   + + E
Sbjct: 595 LVCGDQEMEAGEIAVRTRKGKDLGKFKVDDFVSYIQDEISSRKLNLEE 642



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/159 (8%), Positives = 43/159 (27%), Gaps = 3/159 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R     Y +  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEVFVREKLTEYDYQEVKGPLIMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+   ++ +  +L+        +   +   +                 +       
Sbjct: 315 ADAMFTTASEN-RDYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                      +     ++++   +   ++ V      +
Sbjct: 374 IMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYETF 412


>gi|282163066|ref|YP_003355451.1| threonyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155380|dbj|BAI60468.1| threonyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 636

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/298 (10%), Positives = 72/298 (24%), Gaps = 36/298 (12%)

Query: 210 GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGF 269
           G++ L      D        A  TSE  D            ++  +   +K      +  
Sbjct: 343 GLRRLRAFTMPDMHTLCADMAGATSEFRDQ-----YEMCINTLDTIGLTLKDYEVAIRFT 397

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
            +    ++   K         +   +     +Y    +E      +        V   V 
Sbjct: 398 RDFYDQNKGFIKGLVKRAGKPVVIEMWDQRFFYFVLKFEFNFIDSLDKASALSTVQIDVE 457

Query: 330 GGGRYDGLV-----SRFKGQNVPATGFSIGISRLIVALK------SLESSTNNIKEMGPV 378
              RYD        S+     +  +        +   L+                 + P 
Sbjct: 458 NAERYDITYVDQDGSKKYPTILHCSPSGAIERCIYAQLEKQFMESEKGQVPMLPVWLSPT 517

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +          +     LR    R ++     +    +++ A +   P  +  G  
Sbjct: 518 QVRIISLSDRHADYCRRLAGELRPN--RVDIDDRE-ETVSKKVRDAGKEWIPYVVTIGDA 574

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           E  +    +                   R        + +   V  +K  L ++ + +
Sbjct: 575 EIGKDKFPV-----------------VVRSESQPNKPLKVEMTVEELKARLAKDTDAL 615


>gi|156354210|ref|XP_001623293.1| predicted protein [Nematostella vectensis]
 gi|156209976|gb|EDO31193.1| predicted protein [Nematostella vectensis]
          Length = 559

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ I+  Y   GF  + +P + YS  L +        ++ +FS + + 
Sbjct: 181 FLPKGAVIYNTLINFIKEQYWKRGFQEVVSPNI-YSTKLWETSGHWQHYSEHMFSFEVEK 239

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 240 -ESYALKPMNCPG 251



 Score = 42.5 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/116 (11%), Positives = 32/116 (27%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y       + + V      +G    ++A+ +          + P     +         
Sbjct: 410 TYVTGEGDERKRPVIVHRAILGSVERMIAILTESFGGKWPFWLSPRQAIVIPIGPKYDEY 469

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            Q     +  AG   +  L        +++ A         + G  E + G + ++
Sbjct: 470 AQKVMSDILAAGYHVDADLDHGTTLNKKVRNAQLAQYNFIFVVGEKEATTGTVNVR 525


>gi|116629465|ref|YP_814637.1| prolyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282850819|ref|ZP_06260193.1| proline--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110887|ref|ZP_07712284.1| proline--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273597|sp|Q044C3|SYP_LACGA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116095047|gb|ABJ60199.1| Prolyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282557771|gb|EFB63359.1| proline--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311066041|gb|EFQ46381.1| proline--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 565

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + I     N     +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAENIIEEEMNNINVPEMIMPHLLPA-TLWQESGRYKKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           QD  G+   L    + T      VA+N  +             
Sbjct: 97  QDRHGRESLLGPTHEET--FTEIVAKNLKSYKQMPLALYQIQT 137


>gi|262164341|ref|ZP_06032079.1| threonyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262026721|gb|EEY45388.1| threonyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 642

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++             Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 VVVNITDKQADYAHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +     +A +    + + E
Sbjct: 603 EAGEIAVRTRKGKDLGKFKLDDFIKHIQAEIVSRKLNLEE 642



 Score = 41.0 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 43/167 (25%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V      +       K
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK 420


>gi|258623264|ref|ZP_05718271.1| threonyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262173542|ref|ZP_06041219.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258584450|gb|EEW09192.1| threonyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261890900|gb|EEY36887.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 642

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 40/365 (10%), Positives = 90/365 (24%), Gaps = 11/365 (3%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                  + +     +        +      AD +     +  +Y I   N      I  
Sbjct: 284 QKLNEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHIQIFN 343

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     +  E    +
Sbjct: 344 QGLKSYRDLPLRMAEFGSCHRNEPSGSLHGI-MRVRGFTQDDAHIFCTEDQIQQEVTSCI 402

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                         +   +        G +E+   SE        +  I        G  
Sbjct: 403 KMVYDTYTTFGFQNIVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAMEIPFEIQEGEGAF 462

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGI 355
           Y     +        ++   +              G  Y G  +      +        +
Sbjct: 463 YGPKIEFTLY---DCLDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSL 519

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R I  L    +            +     D  +        Q L+  GIRA+  L  ++
Sbjct: 520 ERFIGILIEEYAGFFPTWLAPEQAVVVNITDKQA-DYAHEVAQKLQKCGIRAKADL-RNE 577

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +++    +  P  ++ G  E   G + ++          ++ +     +A +    
Sbjct: 578 KIGFKIREHTLKRVPYMLVCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIKHIQAEIVSRK 637

Query: 476 IPISE 480
           + + E
Sbjct: 638 LNLEE 642



 Score = 41.0 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 43/167 (25%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     YG+  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V      +       K
Sbjct: 374 IMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK 420


>gi|113970292|ref|YP_734085.1| threonyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|117920487|ref|YP_869679.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|123029660|sp|Q0HIT9|SYT_SHESM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166225501|sp|A0KWV4|SYT_SHESA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|113884976|gb|ABI39028.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella sp.
           MR-4]
 gi|117612819|gb|ABK48273.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 642

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/199 (8%), Positives = 57/199 (28%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+    + +  +++        +   +   +                 +       
Sbjct: 314 SEAMFT-TSSENREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   ++  +               +    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVQAEVSSCI--------QMVYDTYSTFGFENIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++ +  +  RA + L +
Sbjct: 425 EKRIGDDAMWDRAEEALKQ 443



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+ +  M+         +   +  +  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLAPMQVVVMNITDKQADYVEEVVKFFKEQGIRASFDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + G  E     + ++       +       E +      QI++   +L+  
Sbjct: 595 VVGDQEMENKEVAVR---TRDGVDLGKMRIEDFAAKIHQQISLRSLKLLEE 642


>gi|319794591|ref|YP_004156231.1| threonyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597054|gb|ADU38120.1| threonyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 635

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/198 (11%), Positives = 52/198 (26%), Gaps = 9/198 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R IY + G+  ++ P +    SL +           +F+ 
Sbjct: 261 GVVFWHPKGWAVWQAVEQYMRGIYRDTGYWEVKGPQI-LDKSLWEKTGHWQNYRDNMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +        R+YR  P+   E     R         
Sbjct: 319 TESEKREYALKPMNCPG-------HVLIFKSDLRSYRDLPLRYGEFGQCHRNEPSGALHG 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     D  +       L+              +    D + +      +   ++ 
Sbjct: 372 IMRVRGFTQDDGHIFCTEDQILDECIAYTEQLQKVYADFGFTDILYKVATRPENRVGSDE 431

Query: 194 LIVLRAIDKLDKFGLQGV 211
           L        ++     GV
Sbjct: 432 LWDKAEHAVMESLRRSGV 449



 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCP 430
            + PV +  ++             + L+  G+R ++ L + K              +  P
Sbjct: 535 WLAPVQVAVLNISEGQADYAAQVAKTLQNQGLRVQLDLHNEKITYKIRKH----SLQKLP 590

Query: 431 LAIIQGTGERSRGMLQIK 448
             ++ G  E+  G + ++
Sbjct: 591 YILVVGDKEKEAGAVAVR 608


>gi|306826599|ref|ZP_07459905.1| proline--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304431207|gb|EFM34210.1| proline--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 618

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDNSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHHNYEDLDVTYEDYRQ 179



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L   G        + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G+++IK  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|195443826|ref|XP_002069593.1| GK11601 [Drosophila willistoni]
 gi|194165678|gb|EDW80579.1| GK11601 [Drosophila willistoni]
          Length = 1717

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/131 (11%), Positives = 40/131 (30%), Gaps = 10/131 (7%)

Query: 348  ATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD--------HDSDSLSKYQMYTQM 399
                      ++V   +              ++              ++ L   +   Q 
Sbjct: 1477 GITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTKDEERAELLGACKQLEQR 1536

Query: 400  LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSR 458
            L  A +R E     + + G +  + + +  P+ I  G  +      + ++    G++L+ 
Sbjct: 1537 LIGAEVRCEGDYRDNYSPGWKFNHWELKGVPIRIEVGPKDLKAQQIVAVR-RDTGEKLTI 1595

Query: 459  EIKNNESWREA 469
             + + E    A
Sbjct: 1596 PLADVEKKIPA 1606


>gi|206969645|ref|ZP_03230599.1| glycyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218231344|ref|YP_002369706.1| glycyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228955177|ref|ZP_04117187.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229072398|ref|ZP_04205601.1| Glycyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229082160|ref|ZP_04214625.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229147466|ref|ZP_04275814.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229153102|ref|ZP_04281282.1| Glycyl-tRNA synthetase [Bacillus cereus m1550]
 gi|229181212|ref|ZP_04308543.1| Glycyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|296505357|ref|YP_003667057.1| hypothetical protein BMB171_C4529 [Bacillus thuringiensis BMB171]
 gi|206735333|gb|EDZ52501.1| glycyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218159301|gb|ACK59293.1| glycine--tRNA ligase [Bacillus cereus B4264]
 gi|228602266|gb|EEK59756.1| Glycyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228630368|gb|EEK87017.1| Glycyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228636011|gb|EEK92493.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228701152|gb|EEL53673.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228710721|gb|EEL62693.1| Glycyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228804518|gb|EEM51127.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|296326409|gb|ADH09337.1| hypothetical protein BMB171_C4529 [Bacillus thuringiensis BMB171]
          Length = 458

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 223 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMSEESMRLRDHGEEELSHYSNATTDIEFKFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|94991250|ref|YP_599350.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|114152262|sp|Q1JEV3|SYP_STRPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94544758|gb|ABF34806.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 618

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDNSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHHNYEDLDVTYEDYRQ 179



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L   G        + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G+++IK  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|71904323|ref|YP_281126.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|114152264|sp|Q48R89|SYP_STRPM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|71803418|gb|AAX72771.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 618

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDNSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHHNYEDLDVTYEDYRQ 179



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L   G        + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G+++IK  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|19746872|ref|NP_608008.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81847886|sp|Q8NZB4|SYP_STRP8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|19749114|gb|AAL98507.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
          Length = 618

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDNSDFILGPTHEETFTTLVRNAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHHNYEDLDVTYEDYRQ 179



 Score = 38.3 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L   G        + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G+++IK  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|332141016|ref|YP_004426754.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|238693239|sp|B4RSL8|SYT_ALTMD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|327551038|gb|AEA97756.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 638

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 1/99 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  M+             + L+  G RA+  L  ++  G +++    +  P  ++ G  
Sbjct: 541 QVVVMNITDKQADYASDCVKKLQDLGFRAKSDL-RNEKIGFKIREHTLKRIPYMLVVGDK 599

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           E   G + ++           +++  +  +  V + TI 
Sbjct: 600 EMEAGEVAVRSRRGDDLGKMGLEDFIAMAQQEVVEKTIK 638



 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 11/107 (10%), Positives = 31/107 (28%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   +   +R     YG+D ++ PL+       K     D+  + +F+ 
Sbjct: 262 GMVFWHNDGWSIYTELESFVRKKLREYGYDEVKGPLMMDRSLWEKS-GHWDKYAENMFT- 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +                 + 
Sbjct: 320 TESEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEP 366


>gi|302816173|ref|XP_002989766.1| hypothetical protein SELMODRAFT_447798 [Selaginella moellendorffii]
 gi|300142543|gb|EFJ09243.1| hypothetical protein SELMODRAFT_447798 [Selaginella moellendorffii]
          Length = 564

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A    K   + N++L  IR+ Y   GFD + TP + Y+  L +         + +F  
Sbjct: 188 GSAFFLPKGTIVYNKLLQFIRSEYRKRGFDEVVTPNI-YNMKLWEQSGHAAHYKENMFVF 246

Query: 74  QDDDGQWISLRYDLTAP 90
           + +  Q   L+      
Sbjct: 247 EIEK-QEFGLKPMNCPG 262



 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/124 (10%), Positives = 39/124 (31%), Gaps = 1/124 (0%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y         + V      +G    + A+   +++      + P     +         
Sbjct: 421 SYSAEDEAKIERPVIIHRAILGSIERMFAILLEDNAGKWPFWLSPRQAIVLTISEKFKDY 480

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     L  AG   ++ + S +    +++ A   +    ++ G  E+ +G + ++    
Sbjct: 481 AEEVRAKLHAAGFEVDVDV-SDRKVDKKVREAQMAHYNYLLVVGAMEQEKGEVNVRTRGS 539

Query: 453 GKEL 456
             + 
Sbjct: 540 KGQR 543


>gi|229019013|ref|ZP_04175855.1| Prolyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|228742341|gb|EEL92499.1| Prolyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 445

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKY-QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++  SD+  +  +     L+  G    +   + +  G + 
Sbjct: 337 DENGLVWPKAVAPFHVHVIPVNMKSDAQREMGENIYNSLQEQGYEVLLDDRAERA-GVKF 395

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             AD    P+ +  G      G++++K  A G+    +++  +++   
Sbjct: 396 ADADLFGLPVRVTVGKK-ADEGIVEVKVRATGESEEVKVEELQTYIAN 442


>gi|58700004|ref|ZP_00374566.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533480|gb|EAL57917.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 342

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/254 (10%), Positives = 67/254 (26%), Gaps = 13/254 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N +   IR    N G+  ++TP+L   +   K     D+  + +F + + +
Sbjct: 16  WHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWEKS-GHWDKFRENMFIVDESE 74

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++        +    +  +                 +                  
Sbjct: 75  SKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDD 134

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +     + ++        + +    ++                +I +   D+ + R    
Sbjct: 135 AHIFCMEEQVNSETIKFCDLLKEVYSELG------------FNEISVKFSDRPDVRAGDD 182

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ +K  L+ VK                G  L     D +         +    L E
Sbjct: 183 EVWDRAEKALLEAVKEAGLSYELSPGEGAFYGPKLEFVLKDAIGRSWQCGTLQVDFILPE 242

Query: 258 LVKGTIAGEKGFNE 271
            +     G  G   
Sbjct: 243 RLGAFYIGADGHKH 256


>gi|317506968|ref|ZP_07964737.1| glycyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254726|gb|EFV14027.1| glycyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 466

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 26/92 (28%), Gaps = 5/92 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           +  +  D + + K +     LR    I        ++  G + +  D    P  I     
Sbjct: 373 VLPLQKDGELVGKAKELAARLRKRWNI----DYDETQAIGRRYRRQDEIGTPFCITVDFE 428

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 + I++     +    +     +   R
Sbjct: 429 SLEDQAVTIRERDTMSQERVALDQVGRYLLER 460


>gi|229048607|ref|ZP_04194165.1| Glycyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228722726|gb|EEL74113.1| Glycyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 458

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 223 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMSEESMRLRDHGEEELSHYSNATTDIEFKFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|224058287|ref|XP_002194154.1| PREDICTED: prolyl-tRNA synthetase 2, mitochondrial (putative)
           [Taeniopygia guttata]
          Length = 470

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 49/170 (28%), Gaps = 16/170 (9%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M +   +    P G        +R   +++  +    +  G   +  P L  ++ L +  
Sbjct: 68  MLQAGLIHPTSP-GCYCYLPPTVRAMEKLIQLMDEEMQAVGGQKLNLPSLCSAE-LWRAS 125

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFR 116
              D+    +F L D       L    +  +TA +A   ++   +               
Sbjct: 126 GRWDQMGPELFRLVDRHDHGYCLGPTHEEVVTALVA---SQTGLSYKQLPLRLYQVTRKF 182

Query: 117 NEKHGPGR-------FRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
            ++  P         F        D+   +A     ++C         +G
Sbjct: 183 RDEPKPRFGLLRSREFYMKDMYTFDSSEEAARRTYEQVCAAYCSLFARLG 232


>gi|144574986|gb|AAZ43589.2| threonyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 580

 Score = 45.2 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 4/110 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + I N I + +  + + YGF  + TP     + L K     D     +F  
Sbjct: 200 GFPFWLEDGMHIHNEIRNLVLKMDKKYGFTEVLTPHF-GEEKLYKISGHLDHYKDDMFKP 258

Query: 74  QDDDGQWISLRYDLTAP--LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
              + + +  R  +T P  +  + +E       P R      ++R EK G
Sbjct: 259 IVCENERLIPRP-MTCPHHIILFGSEKRSYRDLPIRYSEQSQLYRYEKSG 307



 Score = 37.9 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 34/98 (34%), Gaps = 2/98 (2%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  + + ++  + +         V I  ++ ++D     +     L    IR+++ 
Sbjct: 458 IGTYERFISILIEQTKGNLPFWLAPKQVTIIPVNENTD-YEYAKEVNDKLLALDIRSKVD 516

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             + +    +++ A        +I G  E++   +  +
Sbjct: 517 FRNER-LSKKVREAQISKSKFQVILGEAEKTNKTISYR 553


>gi|294141074|ref|YP_003557052.1| threonyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327543|dbj|BAJ02274.1| threonyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 642

 Score = 45.2 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/199 (8%), Positives = 58/199 (29%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G         R+   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWRLFLELETFIRQKLGQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+ + ++ +  +++        +   +   +                 +       
Sbjct: 314 SEAMFTTKSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   ++  +                      I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVQQEVSACI--------QMVYDTYETFGFKNIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++ +  +  RA + L +
Sbjct: 425 EQRIGDDEMWDRAEEALKQ 443



 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 38/361 (10%), Positives = 93/361 (25%), Gaps = 14/361 (3%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                  + +     +        +      ++ +     +  +Y I   N      I  
Sbjct: 283 QKLGQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTKSENREYAIKPMNCPGHVQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     +  E    +
Sbjct: 343 QGLKSYRDLPLRMAEFGCCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQVQQEVSACI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                         +   +        G +E+   +E   K    +N I+       G  
Sbjct: 402 QMVYDTYETFGFKNIVVKLSTRPEQRIGDDEMWDRAEEALKQALTANDIEFEILPGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGI 355
           Y     +        ++   +              G  Y    +  +   +        +
Sbjct: 462 YGPKIEF---TLHDCLDRAWQCGTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSL 518

Query: 356 SRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            R +  L    +       + P+ +  M+      +       +L+  GIRA   L  ++
Sbjct: 519 ERFLGILIEEYAGKFP-TWLAPMQVVVMNITDKQSNYADEVVNLLKENGIRASKDL-RNE 576

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +++    R  P  ++ G  E     + ++       +       E +      QI+
Sbjct: 577 KIGFKIREHTLRRVPYLLVVGDQEMENKEVAVR---TRDGVDLGKMRIEEFAAKINKQIS 633

Query: 476 I 476
           +
Sbjct: 634 L 634


>gi|260433159|ref|ZP_05787130.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416987|gb|EEX10246.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 652

 Score = 45.2 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 43/390 (11%), Positives = 107/390 (27%), Gaps = 35/390 (8%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N  TI    + Y      R         +   +   +  G   +  +    + + +    
Sbjct: 277 NGWTIYTQLQDYMRRQQRRGGYVEVNTPQVVDRKLWERSGHWDKYQENMFIVEVDEEHAR 336

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI--VLRAIDKLDKFGLQGVKLLL 215
              K  +    +N    ++   + +  + D  L         R        G+  V+   
Sbjct: 337 --EKAVNALKPMNCPCHVEIFKQGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRG-- 392

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVI 275
                D++  F+    +  E    +     +  +                  G +E+   
Sbjct: 393 --FAQDDAHIFSTEDQIGDECARFIGFLTDVYKDLGFDSFKVKFSDRPEQRAGSDEVWDK 450

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
           +E    +   +  ++       G  Y      E +L   +  + Q            R D
Sbjct: 451 AEEALLTATRAAGVEPELNPGEGAFYG--PKLEFVLTDAIGRDWQCGTFQVDFVLPERLD 508

Query: 336 GLVS-----RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                    + +   +           + + ++              V++ ++  ++D  
Sbjct: 509 ATYIGADGAKHRPVMLHRACLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSEAD-- 566

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSR 442
                  + L+ AG+RAE  + + K        + G           P+ +  G  E   
Sbjct: 567 DYVLEVVETLKAAGVRAEADIRNEKINYKVREHSVGK---------VPVILAVGHREVEE 617

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVA 472
             + ++ L + K+   +  +  +   A  A
Sbjct: 618 RTVSVRRLGE-KQTQVQPLDAVTKELAHAA 646


>gi|57234403|ref|YP_181519.1| glycyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|57224851|gb|AAW39908.1| glycyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 433

 Score = 45.2 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/212 (8%), Positives = 47/212 (22%), Gaps = 10/212 (4%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
            Y+ +       +               G                       ++  L   
Sbjct: 214 WYKNLGMNPENLRLRAHRSDELAHY-AKGCYDVEYNFPMGWSELEGIANRRDFD--LTQH 270

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKE 374
                +    F           ++    G       F I           + +  +    
Sbjct: 271 SKYSGKALEYFDEETKEHFIPYVIEPSAGVERSTLAFLIDAYAEEPDKDEIRTVLHLHPA 330

Query: 375 MGPVLITTMDHDSDSL--SKYQMYTQMLRTAGIRA-EMFLGSSKNFGNQLKYADRRNCPL 431
           + P  I  +      +     +     LR    +   +    S++ G + +  D    P 
Sbjct: 331 LAPYKIAVLPLSKKEILSDYARKIYADLR----KCWMVAYDDSQSIGRRYRRQDEIGTPY 386

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +         GM+ I+D     ++  ++   
Sbjct: 387 CVTVDFQSLEDGMVTIRDRDSMDQIRVKVSEL 418


>gi|228923648|ref|ZP_04086927.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228961167|ref|ZP_04122789.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229130174|ref|ZP_04259134.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229193180|ref|ZP_04320132.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590300|gb|EEK48167.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228653288|gb|EEL09166.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228798514|gb|EEM45505.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228836009|gb|EEM81371.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 487

 Score = 45.2 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 252 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMSEESMRLRDHGEEELSHYSNATTDIEFKFP 311

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 312 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 371

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 372 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 428

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 429 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 486


>gi|71894192|ref|YP_278300.1| threonyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 581

 Score = 45.2 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 4/110 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       + I N I + +  + + YGF  + TP     + L K     D     +F  
Sbjct: 201 GFPFWLEDGMHIHNEIRNLVLKMDKKYGFTEVLTPHF-GEEKLYKISGHLDHYKDDMFKP 259

Query: 74  QDDDGQWISLRYDLTAP--LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
              + + +  R  +T P  +  + +E       P R      ++R EK G
Sbjct: 260 IVCENERLIPRP-MTCPHHIILFGSEKRSYRDLPIRYSEQSQLYRYEKSG 308



 Score = 37.9 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 34/98 (34%), Gaps = 2/98 (2%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  + + ++  + +         V I  ++ ++D     +     L    IR+++ 
Sbjct: 459 IGTYERFISILIEQTKGNLPFWLAPKQVTIIPVNENTD-YEYAKEVNDKLLALDIRSKVD 517

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             + +    +++ A        +I G  E++   +  +
Sbjct: 518 FRNER-LSKKVREAQISKSKFQVILGEAEKTNKTISYR 554


>gi|75760257|ref|ZP_00740310.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228903415|ref|ZP_04067542.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228968019|ref|ZP_04129027.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|74492252|gb|EAO55415.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228791690|gb|EEM39284.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856190|gb|EEN00723.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 487

 Score = 45.2 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/238 (7%), Positives = 58/238 (24%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +      E  K  +       E + + +   +   + +           
Sbjct: 252 LEFFCKPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFP 311

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 312 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 371

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L        +    +
Sbjct: 372 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGATEVFAEL-AKDF--MVDFDET 428

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 429 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 486


>gi|317138097|ref|XP_001816665.2| prolyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 558

 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                L +AGIR ++      + G +         PL I+ G  E +  ++ I+
Sbjct: 306 RLVSRLSSAGIRVKVDDLEGYSLGWRFNEWIVSGTPLFIVLGPNEVTNQVVTIR 359


>gi|302670581|ref|YP_003830541.1| glycyl-tRNA synthetase GlyS [Butyrivibrio proteoclasticus B316]
 gi|302395054|gb|ADL33959.1| glycyl-tRNA synthetase GlyS [Butyrivibrio proteoclasticus B316]
          Length = 469

 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/211 (7%), Positives = 53/211 (25%), Gaps = 11/211 (5%)

Query: 270 NELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVG 329
             L +      +  + S+            ++       +   + +   ++         
Sbjct: 261 ENLRLRDHDPEELSFYSDHTTDIEYAFPFTDWGELWGIASRTDYDLTRHQETSGQPMDYF 320

Query: 330 GGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST--------NNIKEMGPVLIT 381
                +  +      ++ A   ++         +++ +          +    + PV I 
Sbjct: 321 DDETNEKYIPYVVEPSLGADRVTLAFLCEAYDEENIGTEEKPDMRTVLHFHPALAPVKIG 380

Query: 382 TMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
            +          +     L +     E       N G + +  D    P  I       +
Sbjct: 381 ILPLSKKLNEGAEKIYAKL-SKKYNCEFD--DRGNIGKRYRRQDEIGTPFCITYDFESEN 437

Query: 442 RGMLQIKDLAKGKELSREIKNNESWREARVA 472
             M+ ++     ++    I   E++   +  
Sbjct: 438 DNMVTVRFRDSMEQERIAIDELEAFFSDKFD 468


>gi|294495462|ref|YP_003541955.1| prolyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666461|gb|ADE36310.1| prolyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 478

 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 51/146 (34%), Gaps = 5/146 (3%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD----HDSD 388
            Y+         +    G S      +++    +       E+ PV +  +        +
Sbjct: 246 TYEDSEGEQVYAHQACYGVSERCLAALISTHGDDKGLVLPPEVAPVQVVIIPIIFKKPEE 305

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            LS  +M  + L+ AGI+ ++   S K  G +    + +  P+ +  G  +       + 
Sbjct: 306 VLSACEMVAEDLKDAGIKVKID-DSDKRPGAKYYKWEMQGVPIRLEIGPRDLKNQAAMMA 364

Query: 449 DLAKGKELSREIKNNESWREARVAQI 474
               G++    +++  S  +   A I
Sbjct: 365 RRDTGEKEQIPLEDISSTIKDTFADI 390


>gi|221480967|gb|EEE19381.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221501688|gb|EEE27452.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 844

 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ N++   +R  Y   GF  + +P +   D L K         + ++   D +
Sbjct: 420 WLPDGAKVYNKLCMFMREEYRFRGFQEVISPNIFSCD-LWKVSGHYQNYKENMYLF-DVE 477

Query: 78  GQWISLRYDLTAP 90
           G+   L+      
Sbjct: 478 GKEWGLKPMNCPG 490



 Score = 42.1 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/125 (8%), Positives = 36/125 (28%), Gaps = 4/125 (3%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        V ++                   +               +L + G  
Sbjct: 704 HRAILGSIERMCAVVIEHTGGKLPFWLSPKQC--IVLPISDKVNDYAASVRDVLHSCGYE 761

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK-ELSREIKNNES 465
             + + ++     +++ A  +     ++ G  ER+   + ++D A  + +    +++  +
Sbjct: 762 VGLDVSNN-TVNKKIREAQLQQWNYLLVVGEKERADKTVTVRDRADPEHQKVLSMEDLLT 820

Query: 466 WREAR 470
             E +
Sbjct: 821 LFEKQ 825


>gi|237844903|ref|XP_002371749.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211969413|gb|EEB04609.1| threonyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 844

 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 ++ N++   +R  Y   GF  + +P +   D L K         + ++   D +
Sbjct: 420 WLPDGAKVYNKLCMFMREEYRFRGFQEVISPNIFSCD-LWKVSGHYQNYKENMYLF-DVE 477

Query: 78  GQWISLRYDLTAP 90
           G+   L+      
Sbjct: 478 GKEWGLKPMNCPG 490



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/125 (8%), Positives = 36/125 (28%), Gaps = 4/125 (3%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        V ++                   +               +L + G  
Sbjct: 704 HRAILGSIERMCAVVIEHTGGKLPFWLSPKQC--IVLPISDKVNDYAASVRDVLHSCGYE 761

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK-ELSREIKNNES 465
             + + ++     +++ A  +     ++ G  ER+   + ++D A  + +    +++  +
Sbjct: 762 VGLDVSNN-TVNKKIREAQLQQWNYLLVVGEKERADKTVTVRDRADPEHQKVLSMEDLLT 820

Query: 466 WREAR 470
             E +
Sbjct: 821 LFEKQ 825


>gi|83764519|dbj|BAE54663.1| unnamed protein product [Aspergillus oryzae]
          Length = 512

 Score = 44.8 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                L +AGIR ++      + G +         PL I+ G  E +  ++ I+
Sbjct: 324 RLVSRLSSAGIRVKVDDLEGYSLGWRFNEWIVSGTPLFIVLGPNEVTNQVVTIR 377


>gi|322379566|ref|ZP_08053903.1| prolyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321147960|gb|EFX42523.1| prolyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 576

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 8/104 (7%)

Query: 350 GFSIGISRLIVALKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
            + IG+SRL+ A+   +        +        VL+     D++ ++  Q   Q L  A
Sbjct: 452 CYGIGVSRLLPAILEQKSDSKGCVWSLESAPFEVVLVVANSKDTELIALAQTLYQELLEA 511

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           G+   +   + + FG ++   +R     A+I G  E   G L++
Sbjct: 512 GVDVLLDDRNLR-FGAKMIDFERIGSSYALIIG-KEAKSGHLEL 553



 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 14/161 (8%), Positives = 40/161 (24%), Gaps = 16/161 (9%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDP----IETPLLEYSDSLGKFLPDEDR 65
           ++  G         ++ ++I + I+   + +G         TP      SL +      +
Sbjct: 34  QIGSGIYSFLPLGQKVLSKIKNIIKEEMDKHGAQECMFNFITPA-----SLWEQSKRLHK 88

Query: 66  PNKGVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK--- 119
             + +   +D       L     ++   + +   +++  +                    
Sbjct: 89  YGQELLVFKDRKNYPFVLGPTHEEVAVEVVKGFVQSYKQLPLHLYQIHTKFRDEIRPRFG 148

Query: 120 -HGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
                 F               E     M  + +     +G
Sbjct: 149 LMRAREFIMKDGYSFHVSTQDLEREFNAMEQVYSRIFTRLG 189


>gi|125625170|ref|YP_001033653.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|152112925|sp|A2RNT2|SYP_LACLM RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|124493978|emb|CAL98976.1| ProS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071979|gb|ADJ61379.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 616

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 21/125 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      L+     D  ++       + LR  G +  +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRNERA-GVKFADSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ +  G    + G++++K  A G+                   + I   ELV+T+ 
Sbjct: 572 IGLPVRVTIGKK-AAEGIVEVKIRATGE------------------VVEINKDELVNTI- 611

Query: 487 KILQE 491
           +IL +
Sbjct: 612 EILSK 616



 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 33/97 (34%), Gaps = 4/97 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++ + +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRVLEKLKNIMREEFDEIGAVELLAPSLLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
           ++ D     L     +    L R    ++  +     
Sbjct: 97  KNRDSSDFILGPTHEETMTSLVRDEITSYKKLPLNVY 133


>gi|76801546|ref|YP_326554.1| prolyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|114152219|sp|Q3IS99|SYP_NATPD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|76557411|emb|CAI48989.1| proline--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 482

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 59/239 (24%), Gaps = 20/239 (8%)

Query: 264 AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPV 323
           A ++    L     L  +               +     T    EA++      +     
Sbjct: 174 AWDETMTRLEQYERLYEEVMAIPGMTGRKPEHDKFPGADTTTTIEALMPDGKSVQAGTSH 233

Query: 324 VFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPV 378
             G+              + +    T       R + AL                    V
Sbjct: 234 YLGTSFAEAFDIEYTDEDETKQTAHTTSWGLSWRALGALIMTHSDDQGLVIPPALAPTQV 293

Query: 379 LITTM---DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
           ++  +   D +             L     R E+     +N G +    + +  PL I  
Sbjct: 294 VVVPIWQADTEEAVKEYAADLAAEL-DEQFRVELDDRDERNPGFKFNEHELQGVPLRIEI 352

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
           G  E       +              + ES    R + IT  + E + TV   L  + E
Sbjct: 353 GPNEVEDEAATL----------VHRPDGESDVAERES-ITDAVDEALETVYAKLYASAE 400


>gi|116513081|ref|YP_811988.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025108|sp|Q02VZ7|SYP_LACLS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116108735|gb|ABJ73875.1| Prolyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 616

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 21/125 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      L+     D  ++       + LR  G +  +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDIHLVPVNVKDEAAMELTSELEEKLRGKGYQVLVDDRNERA-GVKFADSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P+ +  G    + G++++K  A G+                   + I   ELV+T+ 
Sbjct: 572 IGLPVRVTIGKK-AAEGIVEVKIRATGE------------------VVEINKDELVNTI- 611

Query: 487 KILQE 491
           +IL +
Sbjct: 612 EILSK 616



 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 33/97 (34%), Gaps = 4/97 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++ + +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRVLEKLKNIMREEFDEIGAVELLAPSLLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCR 107
           ++ D     L     +    L R    ++  +     
Sbjct: 97  KNRDSSDFILGPTHEETMTSLVRDEITSYKKLPLNVY 133


>gi|56808720|ref|ZP_00366440.1| COG0442: Prolyl-tRNA synthetase [Streptococcus pyogenes M49 591]
 gi|94995163|ref|YP_603261.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|209560100|ref|YP_002286572.1| prolyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|114152263|sp|Q1J4L9|SYP_STRPF RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701346|sp|B5XIL5|SYP_STRPZ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|94548671|gb|ABF38717.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|209541301|gb|ACI61877.1| Prolyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 618

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDNSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHHNYEDLDVTYEDYRQ 179



 Score = 38.3 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L   G        + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G+++IK  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|238852615|ref|ZP_04643025.1| proline--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834761|gb|EEQ26988.1| proline--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 565

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + I     N     +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAENIIEEEMNNINVPEMIMPHLLPA-TLWQESGRYKKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           QD  G+   L    + T      VA+N  +             
Sbjct: 97  QDRHGRESLLGPTHEET--FTEIVAKNLKSYKQMPLALYQIQT 137



 Score = 37.9 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 3/99 (3%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    I      LI     D D     +   + L +      ++   ++  G +   AD 
Sbjct: 463 AWPKEIAPFDVHLIQMKMKDEDQTELAEKLEKEL-STKYDV-LYDDRNERPGVKFNDADL 520

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              PL I  G      G++++K     K    +I + ++
Sbjct: 521 VGAPLRITIGRK-AKDGIVEVKRPTDEKAKEVDISDLDA 558


>gi|291294868|ref|YP_003506266.1| prolyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290469827|gb|ADD27246.1| prolyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 477

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V I   +     L   +   Q L+ AGIR  +      + G +    + +  PL +  G 
Sbjct: 293 VPIYKAETREAVLPAAERLYQELKAAGIRVHLDDRDQYSPGYKFNEWELKGVPLRLELGP 352

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            +   G   +     GKE + +I        AR+ Q 
Sbjct: 353 RDVEAGTAVLASRLGGKE-TLQISELLGLLPARLEQF 388


>gi|255730579|ref|XP_002550214.1| glycyl-tRNA synthetase 1 [Candida tropicalis MYA-3404]
 gi|240132171|gb|EER31729.1| glycyl-tRNA synthetase 1 [Candida tropicalis MYA-3404]
          Length = 652

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 5/102 (4%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRR 427
             I     VL+  + ++ +     +  +Q LR   I  ++   S  + G   +YA  D  
Sbjct: 531 PPIVAPTKVLLVPLSNNPELQPVVKKVSQALRKEKIPFKID-DSGASIGK--RYARNDEL 587

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             P  I           + +++    K++   I+      + 
Sbjct: 588 GTPFGITIDFDSVKDDSVTLRERDSTKQVRGSIEEIVEAIKD 629


>gi|149191774|ref|ZP_01870012.1| threonyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834354|gb|EDL51353.1| threonyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 146

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+         Q  TQ L+ +GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 48  VIMNITDKQSDYVQEVTQKLQKSGIRAKADL-RNEKIGFKIREHTLKRIPYMLVCGDQEM 106

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  S+ +A V+   + + E
Sbjct: 107 EAGEIAVRTRKGKDLGKFKVDDFISYIQAEVSSRKLNLEE 146


>gi|320167861|gb|EFW44760.1| threonyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 726

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +++ IR+ Y   GF  + TP + Y+  L +         + +FS  D +
Sbjct: 338 FLPHGTRIYNTLMEFIRSEYWARGFTEVITPNM-YNSKLWQQSGHWQHYAENMFSF-DIE 395

Query: 78  GQWISLRYDLTAPLARYVAE 97
            +  +L+            +
Sbjct: 396 KEKFALKPMNCPGHCLMFDQ 415



 Score = 41.4 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 28/92 (30%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +   +      + P     +    D         + L  AG   +  L   + 
Sbjct: 590 ERMIAILTENFAGKWPFWLSPRQALVIAVSKDCNDYAHEVQKQLHDAGFHVDYDLWPDET 649

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +++ A        ++ G  ER      ++
Sbjct: 650 LNKKVRNAQLAQYNFILVVGARERESRSANVR 681


>gi|315126513|ref|YP_004068516.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015027|gb|ADT68365.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 636

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 93/338 (27%), Gaps = 16/338 (4%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
                +  +  D      S         M   ++      KR      +N    +    +
Sbjct: 289 QYEEVKGPMMMDRSLWEKSGHWEKYSEAMFTTES-----EKREYAIKPMNCPGHVQIFNQ 343

Query: 181 KIGLHGDD--KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQID 238
            +  + D   ++ E     R        GL  V+        D++  F     +  E   
Sbjct: 344 GLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRG----FTQDDAHVFCTEEQIMDEVSA 399

Query: 239 IMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
            +             ++   +        G +E+   +EL       +N I+       G
Sbjct: 400 CIKMVYDTYETFGFEKIVVKLSTRPEQRIGEDEMWDKAELALADALKANDIEFDYLPGEG 459

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGIS 356
             Y     +          +    V       G      V+    +  P       +G  
Sbjct: 460 AFYGPKIEFTLYDCLDRAWQCG-TVQLDFALPGRLGATYVAENNERRTPVMIHRAILGSI 518

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
              + + + E +      + P  +  M+         Q   Q L   GIRA   L  ++ 
Sbjct: 519 ERFIGILTEEYAGLFPTWLAPKQVVIMNITDKQAPYVQEIVQKLNKLGIRAAADL-RNEK 577

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            G +++    +  P  ++ G  E  +  + ++    G+
Sbjct: 578 IGFKIREHTLKRIPYLLVVGDKEVEQQEVAVRT-RTGE 614



 Score = 43.3 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 8/152 (5%), Positives = 42/152 (27%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   + + +R     Y ++ ++ P++       K     ++ ++ +F+ 
Sbjct: 262 GMVFWHNDGWSIYRELEEFVREKLREYQYEEVKGPMMMDRSLWEKS-GHWEKYSEAMFT- 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +++        +   +   +                 +              
Sbjct: 320 TESEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRGF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +     + ++   ++  ++ V      +
Sbjct: 380 TQDDAHVFCTEEQIMDEVSACIKMVYDTYETF 411


>gi|260943664|ref|XP_002616130.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238849779|gb|EEQ39243.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 653

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VL+  +   +D L   +  + +LR   I  ++   SS + G   +YA  D    P  
Sbjct: 535 PTKVLVVPLSSHADLLPLVKKISAVLRKEQIPFKVD-DSSASIGK--RYARNDELGTPFG 591

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           I         G + +++    K++   +++ 
Sbjct: 592 ITIDFDTAKDGSVTLRERDSTKQVRGSVEDI 622


>gi|15675760|ref|NP_269934.1| prolyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71911486|ref|YP_283036.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|81856026|sp|Q99XY4|SYP_STRP1 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|13622982|gb|AAK34655.1| putative prolyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71854268|gb|AAZ52291.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 618

 Score = 44.8 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDNSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHHNYEDLDVTYEDYRQ 179



 Score = 38.3 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L   G        + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDQVAQDLTAKLEADLMAKGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G+++IK  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|203284284|ref|YP_002222024.1| glycyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083727|gb|ACH93318.1| glycyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 445

 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 19/60 (31%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           MF   +   G + +  D    P  +           + ++D     +    I +  S+ +
Sbjct: 377 MFYDENGTIGKRYRRQDEIGTPYCVTIDYDTIENRTITLRDRDTMTQTRISIDDLYSYVK 436


>gi|50915027|ref|YP_060999.1| prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|139474448|ref|YP_001129164.1| prolyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|81822684|sp|Q5X9U7|SYP_STRP6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|152112957|sp|A2RGI4|SYP_STRPG RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|50904101|gb|AAT87816.1| Prolyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|134272695|emb|CAM30966.1| prolyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 618

 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDNSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHHNYEDLDVTYEDYRQ 179



 Score = 38.7 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L   G        + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDQAAQDLTAKLEADLMAKGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G+++IK  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEIKIKATGDSIEVNAENLIETLEILTKE 617


>gi|229819712|ref|YP_002881238.1| tRNA synthetase class II (G H P and S) [Beutenbergia cavernae DSM
          12333]
 gi|229565625|gb|ACQ79476.1| tRNA synthetase class II (G H P and S) [Beutenbergia cavernae DSM
          12333]
          Length = 409

 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 20/72 (27%), Gaps = 1/72 (1%)

Query: 14 GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
          G          IR  +           G   + TP+L       +      + +  +F  
Sbjct: 24 GLPLWLPDGAVIRGELEAFSLEQALASGCRRVYTPVLAKRSLFERS-GHWAKFSGEMFPE 82

Query: 74 QDDDGQWISLRY 85
              G+ + LR 
Sbjct: 83 MPLGGESLVLRP 94


>gi|223994839|ref|XP_002287103.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220978418|gb|EED96744.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1584

 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 100/325 (30%), Gaps = 48/325 (14%)

Query: 14   GFAD-CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS 72
            G  D     + R+ + +   +  I+ ++G   + +PLL   DS   F+         V +
Sbjct: 930  GSKDVFLGFDPRVMDSLCSKLETIFLSHGAIRLRSPLLRPRDS-TDFVDSSLNRPAEVLN 988

Query: 73   LQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD 132
             +   G  + L+ DLT   AR V+     +              +E    G   + ++  
Sbjct: 989  AR---GSVLLLQEDLTVNFARAVS--RGGVASSNVKRYDVNTVYHESDAGGHPNESLEAT 1043

Query: 133  VDNVGSSAETADAEMCMMMADTLEA----VGIKRNDYHIGINNRKIL------------- 175
             D +   A      +       L      +    +D  I      +L             
Sbjct: 1044 FDIIQDEANAKAEYLEAETILVLCRVMSLLAPPTDDARIIQFPPIVLRSPIWFLRLSHTR 1103

Query: 176  --DGILEKIGLHGDDKLNERLIVLR----------AIDKLDKFGLQGVKLLLGEGRTDNS 223
              D IL+ + +   + +    + +             ++    G    K    +      
Sbjct: 1104 LADAILDLLTVPKSEAMRRSCLNIFTTSTAPNPIELCNQKRHSGKHKQKAKEQKASKLAF 1163

Query: 224  GDFTKGANLTSEQIDI-----MVSFLS-------IDLEKSMHELYELVKGTIAGEKGFNE 271
             D    + + ++++       + +F+S       +D  K++  + E  K   A +   +E
Sbjct: 1164 IDKCLDSAIENDKLPKRAARRIRTFMSHGSLPYPVDANKALDVICEASKKLHASDATSSE 1223

Query: 272  LVVISELVRKSGYNSNRIKISSTIV 296
            L    + + +   +  +       +
Sbjct: 1224 LKDERKWLSRCFDDIIKCINHMRQL 1248


>gi|261493242|ref|ZP_05989769.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496515|ref|ZP_05992895.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307718|gb|EEY09041.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311092|gb|EEY12268.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 643

 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 43/350 (12%), Positives = 95/350 (27%), Gaps = 13/350 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIESEVTSCIKMVYDIYSTFGFTN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G + +   +E    +   +N ++       G  Y     + A+    
Sbjct: 416 IAVKLSTRPENRIGDDAMWDRAEEGLANALRNNGLEYEIQEGEGAFYGPKIEF-ALRDCL 474

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
               +   V       G      V+   G+  P       +G     + + + E +    
Sbjct: 475 GREWQCGTVQLDFALPGRLEASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ---LKYADRRN 428
             + P     M+         Q   + L  AGIR +  L + K  F  +   L+      
Sbjct: 535 TWLAPTQAVVMNITDSQADYVQQVVKQLSDAGIRVKADLRNEKVGFKVREHTLRR----- 589

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            P  ++ G  E + G + ++        +  + +     + ++    + +
Sbjct: 590 VPYMLVCGDKEIAEGKVSVRTRKGADLGTYLVSDLVEILKNQIKARELKL 639



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/265 (7%), Positives = 65/265 (24%), Gaps = 15/265 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             I +      I  K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIESEVTSCI--------KMVYDIYSTFGFTNIAVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
           ++++ +  +  RA + L       ++    E           G  +     D +      
Sbjct: 425 ENRIGDDAMWDRAEEGLA----NALRNNGLEYEIQEGEGAFYGPKIEFALRDCLGREWQC 480

Query: 247 DLEKSMHELYELVKGTIAGEKGFNE 271
              +    L   ++ +   E     
Sbjct: 481 GTVQLDFALPGRLEASYVAEDNGRR 505


>gi|253989346|ref|YP_003040702.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780796|emb|CAQ83958.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 642

 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 42/351 (11%), Positives = 92/351 (26%), Gaps = 16/351 (4%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y +   N      I  +      D      
Sbjct: 297 FMMDRVMWERTGHWENYNEHMFTTSSENREYCVKPMNCPGHIQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E  + +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEEQIHREVSNCIKMVYDVYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G  E    +E    +    N ++       G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGTEEQWNQAEESLAAALQENGVQFEYQPGEGAFYGPKIEF---TLHD 472

Query: 315 VMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            ++   +              G  Y G  +  K   +        + R I  L    +  
Sbjct: 473 CLDRAWQCGTVQLDFSLPSRLGASYVGENNERKVPVMIHRAVLGSLERFIGILTEEYAGF 532

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + P  +  M+         Q   +  + +GIRA+  L  ++  G +++    R  
Sbjct: 533 FP-TWIAPQQVVVMNITDGQADYVQELAKKFQESGIRAKADL-RNEKIGFKIREHTLRRV 590

Query: 430 PLAIIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           P  ++ G  E   G + +     KDL          K     R  ++ Q+ 
Sbjct: 591 PYMLVCGEKEVESGKISVRTRRGKDLGSIDVNEFIEKLLIEIRSRKLHQLE 641


>gi|203287820|ref|YP_002222835.1| glycyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201085040|gb|ACH94614.1| glycyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 445

 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 19/60 (31%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           MF   +   G + +  D    P  +           + ++D     +    I +  S+ +
Sbjct: 377 MFYDENGTIGKRYRRQDEIGTPYCVTIDYDTIENRTITLRDRDTMTQTRISIDDLYSYVK 436


>gi|148982342|ref|ZP_01816719.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145960522|gb|EDK25885.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 304

 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M          Q  T+ L+ +G R +  L  ++  G +++    +  P  ++ G  E 
Sbjct: 206 VVMGITDKQSEYVQEITKKLQKSGFRVKADL-RNEKIGFKIREHTLKRVPFMLVCGDQEM 264

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          ++ +  S+ +A V+   + + E
Sbjct: 265 EAGEIAVRTRKGKDLGKFKVDDFISYIQAEVSSRKLNLEE 304


>gi|212542487|ref|XP_002151398.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210066305|gb|EEA20398.1| prolyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 641

 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 88/297 (29%), Gaps = 38/297 (12%)

Query: 211 VKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF---------------LSIDLEKSMHEL 255
           V+  +G   +D       GA   S     ++                 L  D +K+ + +
Sbjct: 366 VENPVGLWYSDVKKTAASGAQTDSAPAHKIIDLYDSQVAPYSRPPLSGLPEDFDKAKYPV 425

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +       K    L  + E  +    +   +   + +  G  +Y G  Y  +L   V
Sbjct: 426 EFALLNRFPDSKDGLSLTRVVEGEKCPKCSKGFLHTHNAVELGHTFYLGTRYSEVLKAKV 485

Query: 316 MNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEM 375
             +        S     +   +        +  +     ++     ++ L          
Sbjct: 486 FVDSSATKSNESDSNSNKPQNVPMEMGCHGIGVSRMISAVADACSDVRGLN-----WPRA 540

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS-KNFGNQLKYADRRNCPLAII 434
                  +    +  S+ +    +LR     +++ L    K+ G +LK AD    P+ ++
Sbjct: 541 IAPFEIIVVPARNLESEAENVYDLLRQQTDTSDVILDDRTKHVGWKLKDADMIGYPIVVV 600

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
            G   +    L++                   R+    +  +P+  L+  ++ +L  
Sbjct: 601 VGKAWQWAQKLEV-----------------HCRQLDGLREDVPVDNLIDYIRSLLAR 640


>gi|46108732|ref|XP_381424.1| hypothetical protein FG01248.1 [Gibberella zeae PH-1]
          Length = 745

 Score = 44.8 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      +RI N ++D I+  Y+   F+ + +P +  +D L K         + +F+ 
Sbjct: 343 GSAFFLPHGVRIYNALMDLIKGEYQKRDFEEVMSPNMYKAD-LWKTSGHWGHYEENMFTF 401

Query: 74  QDDDGQWISLRYDLTAPLARYVAE 97
           + +  +   L+        +  A 
Sbjct: 402 EVEK-EKFGLKPMNCPGHCKIFAH 424



 Score = 36.7 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/154 (9%), Positives = 44/154 (28%), Gaps = 17/154 (11%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D      +   +             +  +              VL+  +   ++     Q
Sbjct: 599 DLPAGYARPVMIHRAVLGSFERMFGILTEHFGGKWPFWLSPRQVLVVPVMPAAN--DYAQ 656

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              ++ +  G+ +++ L S+  F  +++           + G  E+    L I++     
Sbjct: 657 EVQKIFKAKGLYSDVDLSSN-TFQKKIRKGQLEQFNFIFVVGAEEKESRTLNIRNRDD-- 713

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                       +  +     + I E +  + ++
Sbjct: 714 ------------QSTQAKGELVAIDEALEKLLQL 735


>gi|283456448|ref|YP_003361012.1| glycyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283103082|gb|ADB10188.1| GlyS Glycyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 438

 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 29/97 (29%), Gaps = 2/97 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  S  Q     LR       +    +   G + +  D    PL +      
Sbjct: 317 VLPLSKKPELQSVAQNLADDLRQHDW--MIDYDEAGAIGRRYRREDEIGTPLCVTVDFDT 374

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                + I++    ++    +     +  AR+ +  +
Sbjct: 375 LDDQAVTIRERDTMQQERVALDKVADYVAARIGEKHV 411


>gi|256396139|ref|YP_003117703.1| glycyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256362365|gb|ACU75862.1| glycyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 460

 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  + D   K +   Q+LR      E     +   G + +  D    P  I      
Sbjct: 369 VLPLSRNVDLSPKARDLAQLLRK-NWNVEFD--DAGAIGRRYRRQDEIGTPFCITVDFDT 425

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++    ++    +   E +  AR
Sbjct: 426 LDDQAVTVRERDSMEQQRVALDQVEGYLAAR 456


>gi|188994073|ref|YP_001928325.1| glycyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188593753|dbj|BAG32728.1| glycyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 515

 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/276 (9%), Positives = 63/276 (22%), Gaps = 27/276 (9%)

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           G    +E +     F   + E+   + +      +   + +  L +        G +  R
Sbjct: 246 GKAFRNEIVARQFIFRMREFEQMEMQFFVRPGEELQWFEKWKNLRMQWHRALGFGDDKYR 305

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFP----VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
                 +       T   +E   GF     + +     +       G +           
Sbjct: 306 FHDHDKLAHYANAATDIEFEMPFGFKEVEGIHSRTDFDLSRHEEFSGKKLQYFDPEQNKS 365

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT---------------TMDHDSDS 389
            VP    +      +       S        G + +                 +      
Sbjct: 366 YVPYVVETSIGLDRMFLTILFGSYCEEETSNGEMRVVLKLPAALAPVKLAVLPLVRKDGL 425

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
            +K +     LR              + G + +  D    P  I           + I+ 
Sbjct: 426 DAKAREIVHDLR---FDFACQYDEKDSIGKRYRRQDAIGTPFCITVDHQSLEDNTVTIRY 482

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
               ++   EI    +          + +  L+  +
Sbjct: 483 RDTMEQERVEISRLNAIISEY-----VSLKSLLKKI 513


>gi|167623946|ref|YP_001674240.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083622|sp|B0TT20|SYT_SHEHH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|167353968|gb|ABZ76581.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 642

 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 4/110 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+              + +  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLSPVQVVVMNITDKQSDYVDNVVNLFKEHGIRATKDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           + G  E     + ++     + +       E +      QI++    L+ 
Sbjct: 595 VVGDQEMENNEVAVR---TREGVDLGKMQLEEFATKLKNQISLRSLNLLE 641



 Score = 41.7 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/152 (7%), Positives = 41/152 (26%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           +  +F+    + +  +++        +   +   +                 +       
Sbjct: 314 SDAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   ++  +  V
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVQQEVSACIRMV 404


>gi|268576408|ref|XP_002643184.1| C. briggsae CBR-PRS-1 protein [Caenorhabditis briggsae]
 gi|187040442|emb|CAP20827.1| CBR-PARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 579

 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 49/389 (12%), Positives = 97/389 (24%), Gaps = 44/389 (11%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
             D  G       +             GIK+           + +  LE+   H  D   
Sbjct: 113 YYDVSGCYVLRPWSFAVWEAIQAWFDSGIKKLGVKNCYFPMFVSNAALEREKTHIADFAP 172

Query: 192 ERLIVLRAIDKLDKFGL------QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
           E   V RA        +      + V     +    +  D     N     +       +
Sbjct: 173 EVAWVTRAGQSEMAEPIAIRPTSETVMYPSYKKWVQSHRDLPIKLNQWCNVVRWEFKHPT 232

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG- 304
             L        E             E+  I +L    G  ++ + I     R  E     
Sbjct: 233 PFLRTREFLWQEGHTAFANPSDAEKEVFQILDLYA--GVYNDLLAIPVVKGRKSEKEKFA 290

Query: 305 -----CVYEAILGFPVMNEKQ----KPVVFGSVGGGGRYDGLVSR----FKGQNVPATGF 351
                   EA +       +           S      Y+         F  QN      
Sbjct: 291 GGDFTTTVEAYVACNGRGIQGATSHHLGQNFSKMFDISYEDPAKEGERAFAWQNSWGLST 350

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ----MYTQMLRTAGIRA 407
               + +++                 V++  +   +++           T+ L   GI+A
Sbjct: 351 RTIGAMVMIHGDDKGLILPPRVAAVQVIVVPVGFKTENKEWLFDAVDKVTKDLVAGGIKA 410

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
           E  L  + N G +  + + +  P+    G  + ++  +                   +  
Sbjct: 411 EHDLRENYNAGWKFNHWELKGVPIRFEVGPNDLAKNQVT------------------AVI 452

Query: 468 EARVAQITIPISELVSTVKKILQENKEEI 496
                +  + +  L   VK +L E  + +
Sbjct: 453 RHNGEKRQMSLDGLSEAVKTLLDEIHDAM 481


>gi|154509410|ref|ZP_02045052.1| hypothetical protein ACTODO_01941 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799044|gb|EDN81464.1| hypothetical protein ACTODO_01941 [Actinomyces odontolyticus ATCC
           17982]
          Length = 462

 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 28/91 (30%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +     Q     LR  GI   +    +   G + +  D    P  I      
Sbjct: 372 VLPLSRKPELTGPAQELADELR--GIW-NVDYDDAGAVGRRYRRQDEIGTPFCITYDFDS 428

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++    +++   +   +S+   R
Sbjct: 429 IEDHAVTIRERDTMEQVRIPLDKVKSYLIER 459


>gi|332686700|ref|YP_004456474.1| prolyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370709|dbj|BAK21665.1| prolyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 574

 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 24/76 (31%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         RI   +   +R  +E      +  P +  ++   K           
Sbjct: 34  QIAAGVYAYLPLANRIIENLKKIMREEFEKIDAIEMLLPAILPAELWEKS-GRYQTYGPD 92

Query: 70  VFSLQDDDGQWISLRY 85
           ++ L+D + +   L  
Sbjct: 93  LYRLKDRNERQYILGP 108



 Score = 36.7 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    I      ++     D +     +   +++ +AG    +   + +  G +   AD 
Sbjct: 463 NWPIGIAPFDIHVVQMNMKDDEQTQLSEEIEELMISAGYEVLVDDRNERA-GVKFAEADL 521

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             CP+ I  G       +++IK    G+ L  + +  +S
Sbjct: 522 IGCPIRITVGKKAI-DDIVEIKIKRTGEMLEVKKEELKS 559


>gi|228993636|ref|ZP_04153543.1| Glycyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766065|gb|EEM14712.1| Glycyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 458

 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/238 (7%), Positives = 57/238 (23%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +         K  +       E + + +   +   + +           
Sbjct: 223 LEFFCKPGEDLEWFTFWRNTCKNWLLSLGMHEESMRLRDHGEEELSHYSNATTDIEFKFP 282

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 283 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 342

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L       +     +
Sbjct: 343 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGAGEVFAEL-AKDFVVDFD--ET 399

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 400 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 457


>gi|224026479|ref|ZP_03644845.1| hypothetical protein BACCOPRO_03236 [Bacteroides coprophilus DSM
           18228]
 gi|224019715|gb|EEF77713.1| hypothetical protein BACCOPRO_03236 [Bacteroides coprophilus DSM
           18228]
          Length = 514

 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/266 (8%), Positives = 55/266 (20%), Gaps = 29/266 (10%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+    E    E+   VK     E          +  +  G+  +  +           
Sbjct: 257 QFIFRMREFEQMEMQFFVKPGTELEWFKKWKETRLKWHKALGFGDDHYRYHDHEKLAHYA 316

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGG--------RYDGLVSRFKGQNVPATGFSI 353
                 E ++ F     +                     +Y                   
Sbjct: 317 NAATDIEFLMPFGFKEVEGIHSRTNFDLSQHEKFSGKSIKYFDPEINESYTPYVIETSIG 376

Query: 354 GISRLIVALKSLESSTNNIKEMGPVL-------------ITTMDHDSDSLSKYQMYTQML 400
                +  + +             V+             +  +        K +     L
Sbjct: 377 VDRMFLSIMSAAYCEETLENGETRVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIMNDL 436

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
                          + G + +  D    P  I           + +++    K+    I
Sbjct: 437 ---KFHFHCQYDEKDSIGKRYRRQDAIGTPYCITIDHQTLEDNCVTLRNRDTMKQERVAI 493

Query: 461 KNNESWREARVAQITIPISELVSTVK 486
               +    +     + I+ L+ T++
Sbjct: 494 SELNNIIADK-----VSITSLLKTLQ 514


>gi|47459403|ref|YP_016265.1| threonyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458733|gb|AAT28054.1| threonyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 579

 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       ++I+N I+ ++  + + YGFD + TP++     L +           ++  
Sbjct: 200 GFPIWLENGMKIKNAIMKTVLELDDRYGFDEVHTPIV-GEQKLYETSGHWAHYKDDMYPP 258

Query: 74  QDDDGQWISLRYDLTAP 90
              + + + LR  +T P
Sbjct: 259 IKVENENLILRP-MTCP 274



 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/212 (8%), Positives = 49/212 (23%), Gaps = 11/212 (5%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
             +   +  +  +     E    +L  + + ++         K                 
Sbjct: 360 SRRDPKDKEKFYQDDKLWETAEKDLETVLKELK------IEYKEMIGEAAFYGPKIDFQV 413

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
             +L   +     +            Y    +  +   +   G      R +  L     
Sbjct: 414 RTVLNHEITMSTLQLDFLLPEKFDMSYVNENNEREKPVLIHRGLIGTYERFLSILLEQNK 473

Query: 368 --STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +      +     +D   +       + L++            +    +++ A 
Sbjct: 474 GVFPFWLAPKQFAIAVVNPNDKMQIEYADSVYKTLKSKKFHVYFDNRDER-LSKKIREAQ 532

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
                   + G  E     + I+  A G+E +
Sbjct: 533 ISKTKYIFVIGEEEAKTKTITIR--AYGEEST 562


>gi|66362768|ref|XP_628350.1| threonyl-tRNA synthetase (RNA binding domain TGS+HxxxH+tRNA
           synthetase) [Cryptosporidium parvum Iowa II]
 gi|46229397|gb|EAK90215.1| threonyl-tRNA synthetase (RNA binding domain TGS+HxxxH+tRNA
           synthetase) [Cryptosporidium parvum Iowa II]
          Length = 763

 Score = 44.8 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 3/105 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+ N+++D IRN Y    F  + TP +   D L K         + +F   D +
Sbjct: 358 WLPAGARLYNKLMDFIRNEYRIREFTEVITPNIFSCD-LWKTSGHYFAYKENMFIF-DVE 415

Query: 78  GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            +   L+          +   N      P R    G + RNE  G
Sbjct: 416 EKEWGLKPMNCPGHCVMFKHMNPSYRQLPIRLADFGVLHRNEFSG 460


>gi|325475340|gb|EGC78525.1| glycyl-tRNA synthetase [Treponema denticola F0402]
          Length = 451

 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 34/128 (26%), Gaps = 21/128 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +       V +  +          +     L+    +       S   G + +  D 
Sbjct: 343 LHFHPNIAPITVAVLPLMKKDGLAELAEEIRNELKEE-FKT--DYDQSGAIGKRYRRQDE 399

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  +      +    + ++                      + Q+ IP +EL+S +K
Sbjct: 400 VGTPFCVTVDYDSKEDNTVTLR------------------FRDSMEQVRIPRTELISRIK 441

Query: 487 KILQENKE 494
             ++  K 
Sbjct: 442 TEIKNYKR 449


>gi|293189558|ref|ZP_06608278.1| glycine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292821648|gb|EFF80587.1| glycine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 462

 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 28/91 (30%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +     Q     LR  GI   +    +   G + +  D    P  I      
Sbjct: 372 VLPLSRKPELTGPAQELADELR--GIW-NVDYDDAGAVGRRYRRQDEIGTPFCITYDFDS 428

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++    +++   +   +S+   R
Sbjct: 429 IEDHAVTIRERDTMEQVRIPLDKVKSYLIER 459


>gi|119945879|ref|YP_943559.1| threonyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166225485|sp|A1SWU5|SYT_PSYIN RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|119864483|gb|ABM03960.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychromonas
           ingrahamii 37]
          Length = 635

 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 36/337 (10%), Positives = 86/337 (25%), Gaps = 10/337 (2%)

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           +  +     +          +  +             +        R+     +N    L
Sbjct: 278 KYVREQTEAYDYQEVKAPQILDRALWEKSGHWGKYKDNMFCTSSENRDYAIKPMNCPGHL 337

Query: 176 DGILEKIGLHGDDKLNERLI--VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
               + +  + D  L         R        GL  V+        D++  F     + 
Sbjct: 338 QIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRA----FTQDDAHIFCTEEQIL 393

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            E    +             ++   +        G +     +E    +   +N I    
Sbjct: 394 DEVSACIQMVFECYKTFGFDDIAVKLSTRPDQRVGDDATWDKAEAALANALTTNNINYGV 453

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GF 351
               G  Y     +           +   +       G      V     ++ P      
Sbjct: 454 LPGEGAFYGPKIEFTLY-DCLGRGWQCGTIQLDFSMPGRLDASFVGEDNERHTPVMIHRA 512

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFL 411
            +G     + + + E +      + P  +  M+      +        L+ +GIRA   L
Sbjct: 513 ILGSLERFIGILTEEYAGVYPTWLSPKQVVVMNITDKQSAFVDEVVNKLKKSGIRAISDL 572

Query: 412 GSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
             ++  G +++    +  P  ++ G  E   G + ++
Sbjct: 573 -RNEKIGFKIREHTLKRVPYLLVIGDQEVEAGEVAVR 608


>gi|198425233|ref|XP_002123203.1| PREDICTED: similar to novel prtoein similar to vertebrate
           threonyl-tRNA synthetase (TARS, zgc:92586) [Ciona
           intestinalis]
          Length = 630

 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 32/104 (30%), Gaps = 6/104 (5%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR--TAG 404
                      + +  ++             V+I  +    D  ++       LR   AG
Sbjct: 485 HRAILGSVERMIAILTENYGGKWPLWLSPRQVMILAVSSKYDEYAESV----RLRMHEAG 540

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           I+ ++          +++ A        ++ G  E + G + I+
Sbjct: 541 IQVDLEKDPGLTLNKKIRTAQLEQYNFILVVGEKEETNGTVNIR 584



 Score = 42.1 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 2/86 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++  I+  Y   GF+ + +P + Y+  L          ++ +FS   + 
Sbjct: 240 FFPRGAFIYNTLISFIKEEYRKRGFEEVVSPNI-YNSKLWMTSGHWQHYDQNMFSFSVEK 298

Query: 78  GQWISLRYDLTAPLARYVAENFDTIV 103
            +  +L+           +    +  
Sbjct: 299 -ETFALKPMNCPGHCLMFSHRSRSWR 323


>gi|167762197|ref|ZP_02434324.1| hypothetical protein BACSTE_00549 [Bacteroides stercoris ATCC
           43183]
 gi|167699840|gb|EDS16419.1| hypothetical protein BACSTE_00549 [Bacteroides stercoris ATCC
           43183]
          Length = 497

 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 70/235 (29%), Gaps = 24/235 (10%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V SE   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYSEFAEKYMAVPVVKGVKSANERFAGALNTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQLKYADR--RNCPLAIIQGTGER 440
           ++ L+K           L+  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 AEMLAKIDEKVAGIVAKLKAMGISVKYDNADNKRPG--FKFADYEVKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
               +++      ++ +R     E + +           +L+  ++  + +   +
Sbjct: 372 ENNTMEVMRRDTLEKETRSCDGIEEYVK-----------DLLEEIQANIYKKALD 415


>gi|34541737|ref|NP_906216.1| glycyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|34398055|gb|AAQ67115.1| glycyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 515

 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/276 (9%), Positives = 63/276 (22%), Gaps = 27/276 (9%)

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           G    +E +     F   + E+   + +      +   + +  L +        G +  R
Sbjct: 246 GKAFRNEIVARQFIFRMREFEQMEMQFFVRPGEELQWFEKWKNLRMQWHRALGFGDDKYR 305

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFP----VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQ 344
                 +       T   +E   GF     + +     +       G +           
Sbjct: 306 FHDHDKLAHYANAATDIEFEMPFGFKEVEGIHSRTDFDLSRHEEFSGKKLQYFDPEQNKS 365

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLIT---------------TMDHDSDS 389
            VP    +      +       S        G + +                 +      
Sbjct: 366 YVPYVVETSIGLDRMFLTILFGSYCEEETSNGEMRVVLKLPAALAPVKLAVLPLVRKDGL 425

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
            +K +     LR              + G + +  D    P  I           + I+ 
Sbjct: 426 DAKAREIVHDLR---FDFACQYDEKDSIGKRYRRQDAIGTPFCITVDHQSLEDNTVTIRY 482

Query: 450 LAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
               ++   EI    +          + +  L+  +
Sbjct: 483 RDTMEQERVEISRLNAIISEY-----VSLKSLLKKI 513


>gi|53711703|ref|YP_097695.1| glycyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60679942|ref|YP_210086.1| glycyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253564239|ref|ZP_04841696.1| glycyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265765086|ref|ZP_06093361.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|52214568|dbj|BAD47161.1| glycyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60491376|emb|CAH06124.1| putative glycyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|251948015|gb|EES88297.1| glycyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263254470|gb|EEZ25904.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301161467|emb|CBW21007.1| putative glycyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 513

 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/235 (6%), Positives = 48/235 (20%), Gaps = 29/235 (12%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +  +  +  G+  +  +                 E ++ F     +             
Sbjct: 287 EIRLKWHKALGFGDDHYRFHDHDKLAHYANAATDIEFLMPFGFKEVEGIHSRTNFDLSQH 346

Query: 333 --------RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL----- 379
                   +Y                        +  + +             V+     
Sbjct: 347 EKFSGKSIKYFDPELNESYTPYVIETSIGVDRMFLSIMSAAYCEEQLENGESRVVLKLPA 406

Query: 380 --------ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  +        K +     L               + G + +  D    P 
Sbjct: 407 ALAPVKLAVMPLVKKDGLPEKAREIIDNL---KFHFHCQYDEKDSIGKRYRRQDAIGTPY 463

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
            +           + +++    ++    I    +    R     + I+ L+ T++
Sbjct: 464 CVTVDHQTLEDNCVTLRNRDTMEQERVAISELNNIIADR-----VSITSLLKTIQ 513


>gi|253573561|ref|ZP_04850904.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251847089|gb|EES75094.1| prolyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 483

 Score = 44.8 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 71/254 (27%), Gaps = 30/254 (11%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        ++   E    L +  + V         +   +   +          EA+
Sbjct: 163 WQEGHTAHENEQEAREETMRMLEIYRDFVENYLAIPVIVGQKTPSEKFAGAVDTYSIEAM 222

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G+          ++R   +    T      +RLI +L        
Sbjct: 223 MKDGRAVQAGTSHYLGTNFAKAFDIQYLNRENVREYVHTTSWGVSTRLIGSLIMVHGDDR 282

Query: 366 ESSTNNIKEMGPVLITTMD---HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
             +         V+I  +         + +       L+ AGIR  +   +    G +  
Sbjct: 283 GLALPPKVAPKQVMIIPIGPPKTWEAVVGRADELFAELKKAGIRVGIDDRADFRPGWKFN 342

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
             + R  P+ +  G  +   G+  +     G++                    +    LV
Sbjct: 343 EYEMRGVPVRLEIGPRDMENGVCVLVSRISGEKKV------------------VQQDRLV 384

Query: 483 STVKKILQENKEEI 496
             V+ +L++  +E+
Sbjct: 385 EEVQAMLEQVHQEM 398


>gi|212715520|ref|ZP_03323648.1| hypothetical protein BIFCAT_00418 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660887|gb|EEB21462.1| hypothetical protein BIFCAT_00418 [Bifidobacterium catenulatum DSM
           16992]
          Length = 491

 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 30/102 (29%), Gaps = 2/102 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  +        LR       +    +   G + +  D    PL I      
Sbjct: 370 VLPLSKKPELQTVAHDLAADLRQHDW--MIDYDEAGAIGRRYRREDEIGTPLCITVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
                + I++    ++    +     +  AR+ +  +   +L
Sbjct: 428 LDDQAVTIRERDTMQQERVALDKVADYVAARIGEKHVRYPQL 469


>gi|172058375|ref|YP_001814835.1| ATP phosphoribosyltransferase [Exiguobacterium sibiricum 255-15]
 gi|171990896|gb|ACB61818.1| ATP phosphoribosyltransferase involved in histidine
           biosynthesis-like protein [Exiguobacterium sibiricum
           255-15]
          Length = 273

 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 28/101 (27%), Gaps = 24/101 (23%)

Query: 8   RAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPN 67
              L  G  D          R++  + +  E   +  + TPL+E                
Sbjct: 6   TIRLKDGATDYVGPSAERLQRVIRQLEDGLEQSNYTRLITPLIEEV-------------- 51

Query: 68  KGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
                     G+   +R D T  +AR ++E           
Sbjct: 52  ---------GGRE-QIRMDFTTSVARALSERGREQYKRVFY 82


>gi|329895719|ref|ZP_08271123.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328922195|gb|EGG29550.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 641

 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 43/152 (28%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   +RN     G+  I+TP +    +L       D+    +F L
Sbjct: 261 GMVFWHPKGWTVYQVIEQYMRNRQRQEGYKEIKTPQVVDM-TLWHKSGHADKFGDDMFML 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +D +  +++        +   +   +                 +              
Sbjct: 320 KAED-REFAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
               +     + ++   ++  ++ +     D+
Sbjct: 379 TQDDAHIFCTEDQIQPEVSRFIDFLHGVYEDF 410


>gi|146328703|ref|YP_001209437.1| threonyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166223338|sp|A5EVK6|SYT_DICNV RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|146232173|gb|ABQ13151.1| threonyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 640

 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 38/374 (10%), Positives = 96/374 (25%), Gaps = 39/374 (10%)

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
            +   + +   +      +  D  +  M       +  +    +  +  R    GI  + 
Sbjct: 305 EKSGHWDKFGGNMFTCCIDNHDFAVKPMNCPGHVQIFNQGLKSYRELPIRYAEFGICHRN 364

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
              G      R+      D         V++ +          +        E       
Sbjct: 365 EPSGTLHGIMRVRRFVQDDGHIFCARNQVRVEIERTCRMVYEVYDDFGFKNVELALSTRP 424

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
              +  ++   E    ++  +  +     L                  +  ++ R  +  
Sbjct: 425 EKRVGSDEIWDEAERGLQEALEAQNLAFRLQPGEG---AFYGPKIEFTLKDSLGRRWQCG 481

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           T  +                    +  G    D    +     +           + + +
Sbjct: 482 TVQL---------------DFSMPARLGAEYIDEHGEKQTPVMIHRAILGSLERFIGILI 526

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    +         V    M          Q   Q    AGIRAE+ L  ++    +++
Sbjct: 527 EQYAGNMPVWLSP--VQAMIMPITDTHADYVQNVMQKFIAAGIRAEIDL-RNEKISYKIR 583

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
               +  P  ++ G  E+    L ++    GKEL                   + I+ ++
Sbjct: 584 EHTLQRVPFLLVAGDREKQSNTLSVRT-RDGKELGV-----------------MEIATII 625

Query: 483 STVKKILQENKEEI 496
             ++ +++   +EI
Sbjct: 626 EHIRHLIETKSQEI 639



 Score = 40.6 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 42/152 (27%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   I + +R     YG+  ++ P +    SL +     D+    +F+ 
Sbjct: 262 GMVFWHAKGWTIYREIENYMRTKLRKYGYQEVQGPQI-LDRSLWEKSGHWDKFGGNMFTC 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              D    +++        +   +   +       Y    +    +              
Sbjct: 321 CI-DNHDFAVKPMNCPGHVQIFNQGLKSYRELPIRYAEFGICHRNEPSGTLHGIMRVRRF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                    A  ++ + +  T   V    +D+
Sbjct: 380 VQDDGHIFCARNQVRVEIERTCRMVYEVYDDF 411


>gi|118566325|gb|ABL01534.1| tRNA synthetase [Mycosphaerella fijiensis]
          Length = 182

 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 2/85 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A      + I N ++  ++  Y   G+  + +P + Y+ +L K        ++ +F+ 
Sbjct: 21  GSAFFLPHGMIIYNSLMAYLKEEYWRRGYQEVASPNM-YNSALWKQSGHWQHYHEDMFTF 79

Query: 74  QDDDGQWISLRYDLTAPLARYVAEN 98
            D +    +L+           A  
Sbjct: 80  -DVEKDKWALKPMNCPGHCLLFAHR 103


>gi|88602429|ref|YP_502607.1| prolyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|114152211|sp|Q2FLY5|SYP_METHJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|88187891|gb|ABD40888.1| prolyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 478

 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 81/264 (30%), Gaps = 12/264 (4%)

Query: 240 MVSFLSIDLEKSMHELYELVKGTI-AGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           ++    I   K  H ++   +      E          + +      S R          
Sbjct: 151 LIRLREITSFKEAHTVHATWEDAERQVEDAIARYREFYDRLNIPVLISKRPDWDKFPGAD 210

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
                  +        +         F       +Y+    + +  +    G S      
Sbjct: 211 YTIAVDTIMPDGRTLQIGTVHHLGDHFSKTFSI-QYEDTKGQQQYCHQTCYGISERSIAA 269

Query: 359 IVALKSLESSTNNIKEMGPVLITTMD-----HDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           ++++   +       E+ PV I  +       + + +   ++  + L+ AG R ++    
Sbjct: 270 LISMHGDDRGLMLPPEVAPVQIVIVPVIMKKREEEIMQAAELLEKELQNAGYRVKIDTRD 329

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVA 472
            +  G +  Y + R  PL +  G  +   G++  +  L  G + S    +  +    ++ 
Sbjct: 330 LR-PGAKYYYWEMRGVPLRLEIGPRDLDNGVVMGV--LRSGGKESLPRADIIAEVNRKMT 386

Query: 473 QIT-IPISELVSTVKKILQENKEE 495
           + T I      + +K  L   KEE
Sbjct: 387 EFTAILQERAKTHIKDHLVMVKEE 410


>gi|84496816|ref|ZP_00995670.1| glycyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383584|gb|EAP99465.1| glycyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 471

 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 26/91 (28%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      +     +   G + +  D    P  I      
Sbjct: 380 VLPLSRNADLSPKARDLAATLRKH-WNVDFD--DAGAIGKRYRRQDEIGTPFCITVDFDT 436

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++     +    +   E +   R
Sbjct: 437 LDDQAVTIRERDTMAQERVALDQVEGYLAQR 467


>gi|108803928|ref|YP_643865.1| prolyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123069165|sp|Q1AX25|SYP_RUBXD RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|108765171|gb|ABG04053.1| prolyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 476

 Score = 44.8 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 59/206 (28%), Gaps = 19/206 (9%)

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
           R          E ++G     +       G           +   + +  P        +
Sbjct: 205 RFAGAVETFTCEGLMGDGRALQAATSHDLGQNFARAFDITFLDENQERVHPYQTSWGFST 264

Query: 357 RLIVAL-----KSLESSTNNIKEMGPVLITTMDHDS---DSLSKYQMYTQMLRTAGIRAE 408
           R I AL                     ++  +       +   + +   + L  AG+RAE
Sbjct: 265 RTIGALILVHGDDRGLRLPPKLAPTQAVVVPIWRGKNKGEVRREAEALHRELAEAGLRAE 324

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
             L    + G +    + R  P+ +  G  +  +G   +     G++        E    
Sbjct: 325 ADLDEEHSPGWKFNEHELRGVPVRVELGPKDIEKGQAVLVRRDTGEK--------EFVGR 376

Query: 469 ARVAQITIPISELVSTVKKILQENKE 494
              A+  +   EL+  +++ +    E
Sbjct: 377 GAAARRLV---ELMDEIQQNMLRQAE 399


>gi|322514773|ref|ZP_08067797.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119269|gb|EFX91397.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 653

 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 93/346 (26%), Gaps = 5/346 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 307 FMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 366

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 367 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFSN 425

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G + +   +E        +N +        G  Y     +       
Sbjct: 426 IQVKLSTRPENRIGDDAMWDRAEDGLAKALTANGLSYEIQEGEGAFYGPKIEFALRDCLD 485

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    +       G      V+   G+  P       +G     + + + E +    
Sbjct: 486 REWQCG-TIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFP 544

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P     M+         Q  T+ L  AGIRA+  L  ++  G +++    R  P  
Sbjct: 545 TWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDL-RNEKVGFKVREHTLRRVPYM 603

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           ++ G  E   G + ++        +  I+      + +V    + +
Sbjct: 604 LVCGDKEIEAGKVSVRTRKGADLGTFTIEEFVEILKNQVKARELKL 649



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/197 (8%), Positives = 52/197 (26%), Gaps = 11/197 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 266 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWERTGHWQNY 323

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 324 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 382

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             I +      I  K+    
Sbjct: 383 LMRVRGFTQDDAHIFCTEDQIESEVTSCI--------KMVYDIYSTFGFSNIQVKLSTRP 434

Query: 187 DDKLNERLIVLRAIDKL 203
           ++++ +  +  RA D L
Sbjct: 435 ENRIGDDAMWDRAEDGL 451


>gi|262275836|ref|ZP_06053645.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262219644|gb|EEY70960.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 642

 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+   +     Q   + L+ AG RA   L  ++  G +++    +  P  ++ G  E 
Sbjct: 543 VVMNITDNQAEYVQEVAKKLQKAGFRASADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 601

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
             G + ++          +I    S  E  +   T+ I E
Sbjct: 602 EAGEIAVRTRKGKDLGKYKIDEFISLLENEIRTRTLNILE 641



 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 42/152 (27%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   +R+    Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQQEAP-GMVFWHHNGWVVFRELEAFVRSKLAEYNYQEVKGPLIMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +L+        +   +   +                 +       
Sbjct: 314 ADYMFTTQSEN-REYALKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +       ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTPEQVQQEVTSCIKMV 404


>gi|228476457|ref|ZP_04061147.1| prolyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228251878|gb|EEK10924.1| prolyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 621

 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 48/177 (27%), Gaps = 30/177 (16%)

Query: 1   MGKKTKLRAELPR-------------------------GFADCPTKEIRIRNRILDSIRN 35
           M K++K+     R                         G         R   +    +R 
Sbjct: 1   MMKQSKMLISTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMRE 60

Query: 36  IYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRY--DLT-APLA 92
            +E  G   +  P L  +D L +     +   + ++ L++ D     L    + T   L 
Sbjct: 61  EFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTALV 119

Query: 93  RYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCM 149
           R   +++  +       +       ++   G  R       D         D ++  
Sbjct: 120 RDAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTY 175



 Score = 39.8 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 2/108 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L   G        + +  G++   +D 
Sbjct: 514 NFPKELAPYDVHLITVNTKDEEANALTERLEAALMAEGYDVLTDDRNER-VGSKFSDSDL 572

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P+ +  G    S G++++K  A G  +     N          + 
Sbjct: 573 IGLPIRVTVGKK-ASEGVVEVKIKATGDTIEVNADNLIETLAILTTEQ 619


>gi|121712626|ref|XP_001273924.1| glycyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119402077|gb|EAW12498.1| glycyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 699

 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 35/116 (30%), Gaps = 6/116 (5%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VLI  +   +      Q     LR  G+   +   SS + G   +YA  D    P  
Sbjct: 582 PTKVLIVPLSTHASFRPLLQQLMTKLRRLGVSNRVD-DSSASIGK--RYARNDELGTPFG 638

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
           I             ++D    K++    +      ++ V        ++   + + 
Sbjct: 639 ITVDFQSVKDNTFTLRDRDTTKQVRASEEEILQAIKSLVDG-EKSWEDIRKELPEF 693


>gi|330444263|ref|YP_004377249.1| prolyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807373|gb|AEB41546.1| prolyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 577

 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 73/239 (30%), Gaps = 23/239 (9%)

Query: 233 TSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             E +  M +F+  + +K MH +       +   +  + L+     +     +       
Sbjct: 347 ADESLRPMTNFICANNKKDMHCINVNWGRDLPEPEYADYLLAQEGDLCPVNPDVPYKIFQ 406

Query: 293 STIVRGLEYYTGCVYEAI-LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGF 351
              V  +        E+    F     K++P   G+ G G                    
Sbjct: 407 GIEVAHIFNLGIRYTESFQATFQDEEGKERPCWMGTYGIG------------------IG 448

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAE-MF 410
               + +     S       I     + I     D+ S        Q L+  G   E + 
Sbjct: 449 RTLAACVEQLSDSRGIVWPEIIAPFSISILYNGGDTPSEQVAYSLYQDLQQQG--CEPLL 506

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
               +  G +LK +D    P  +I G    + G+L+I+    G++ S   +N  SW   
Sbjct: 507 DDRDERLGFKLKDSDLIGIPYKLIIGKAYHASGILEIES-RSGEKFSVPPENFISWSHE 564



 Score = 37.9 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 27/74 (36%), Gaps = 1/74 (1%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG-VF 71
           +G         R+  + ++ IR      G   +  P+L  ++   +        ++  ++
Sbjct: 36  KGIYTYTPLLWRVVLKFMEIIREELNAIGGQELLLPILHPAEYWLQTGRWHAFVSENLLY 95

Query: 72  SLQDDDGQWISLRY 85
            L D +G+   L  
Sbjct: 96  HLIDREGKEHCLAP 109


>gi|269926946|ref|YP_003323569.1| glycyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790606|gb|ACZ42747.1| glycyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 457

 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 27/104 (25%), Gaps = 3/104 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +       V +  +      +         L  A +        + + G + +  D 
Sbjct: 354 LRFHPRIAPVKVAVLPLSRKEPLIKIAWEIRDRL--ADVYV-TDYDETGSIGRRYRRQDE 410

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              P  +           + I+D    ++    I   ES  + +
Sbjct: 411 IGTPYCVTVDFQTLEDNAVTIRDRDTMQQDRVSISELESVLKDK 454


>gi|294675495|ref|YP_003576111.1| glycine--tRNA ligase [Prevotella ruminicola 23]
 gi|294472490|gb|ADE81879.1| glycine--tRNA ligase [Prevotella ruminicola 23]
          Length = 513

 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 32/109 (29%), Gaps = 8/109 (7%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +  +        K +     L       +       + G + +  D    P  +    
Sbjct: 413 CAVMPLVKKDGLPEKAREIIDQL-KFHFNCQ--YDEKDSIGKRYRRQDAIGTPYCVTVDH 469

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              + G + ++     ++    I +  S  E +     + I+ L+  ++
Sbjct: 470 DTLTDGKVTLRFRDTMEQERVNISDLNSIIEDK-----VSIASLLKKLQ 513


>gi|224025842|ref|ZP_03644208.1| hypothetical protein BACCOPRO_02584 [Bacteroides coprophilus DSM
           18228]
 gi|224019078|gb|EEF77076.1| hypothetical protein BACCOPRO_02584 [Bacteroides coprophilus DSM
           18228]
          Length = 521

 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 15/122 (12%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  + + L    +K +     LR  GI  +     +K  G   
Sbjct: 318 GLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLRELGISVKYDNADNKRPG--F 375

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQI-------KDLAKGKELSREIKNNESWREARVA 472
           K+AD   +  P+ ++ G  +     ++I       K+    + +   +KN     +  + 
Sbjct: 376 KFADYELKGVPVRLVMGGRDLENNTMEIMRRDTLEKETRTCEGIEEYVKNLLEDIQNNIY 435

Query: 473 QI 474
           Q 
Sbjct: 436 QK 437


>gi|32490830|ref|NP_871084.1| hypothetical protein WGLp081 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340448|sp|Q8D3C0|SYT_WIGBR RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|25166036|dbj|BAC24227.1| thrS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 636

 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 93/335 (27%), Gaps = 12/335 (3%)

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
            + +     +        +       + +     +   Y I   N      I +K     
Sbjct: 288 YYQEVKTPCIIDHDLWRLSGHLDNYKNYMFHTNSENKQYCIKPMNCPAHVLIFKKKIRSY 347

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246
            +                   L G+ + +     D++  F     + SE    +     +
Sbjct: 348 KELPFRISEFGSCHRNEPSGSLHGL-MRIRNFTQDDAHIFCMHDQILSEVSSCIKMIYEV 406

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
                  ++   +        G +E+   +E   +     N+I     +  G  Y     
Sbjct: 407 YSCFGFKKILVKLSTRPENRIGSDEIWDFAEKQLELSLKKNKILFKIDLNEGAFYGPKIE 466

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGR----YDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +        +N K +                Y       K   V      +G     + +
Sbjct: 467 F---TLLDSLNRKWQCGTIQLDLCLANKLQAYYINNKNEKTNPVIIHRAILGSMERFIGI 523

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQL 421
            + E S      + P+ +  ++   D +   +  T+      IR    L + K +F   +
Sbjct: 524 ITEEFSGKYPLWISPIQVGVINVSVDQIDYVKKITKFFLQKKIRIISDLRNEKISFK--I 581

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
           +    R  P  II G  E     + +++   GK+L
Sbjct: 582 REYTLRFIPYIIICGKKEMESNSISVRN-KYGKQL 615



 Score = 37.1 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 44/183 (24%), Gaps = 18/183 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   +   IR   + + +  ++TP +   D L +     D     +F  
Sbjct: 261 GMVFWHHNGWIIFRILEKFIRKKLKKFYYQEVKTPCIIDHD-LWRLSGHLDNYKNYMFH- 318

Query: 74  QDDDGQWISLRYDLTAPLA-------RYVAENFDTIVFPCRTYRIGP---------VFRN 117
            + + +   ++               R   E    I      +R  P         +   
Sbjct: 319 TNSENKQYCIKPMNCPAHVLIFKKKIRSYKELPFRISEFGSCHRNEPSGSLHGLMRIRNF 378

Query: 118 EKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDG 177
            +     F    Q   +         +   C      L  +  +  +           + 
Sbjct: 379 TQDDAHIFCMHDQILSEVSSCIKMIYEVYSCFGFKKILVKLSTRPENRIGSDEIWDFAEK 438

Query: 178 ILE 180
            LE
Sbjct: 439 QLE 441


>gi|297559717|ref|YP_003678691.1| glycyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844165|gb|ADH66185.1| glycyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 462

 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 10/91 (10%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      E     +   G + +  D    P  +      
Sbjct: 371 VLPLSRNADLSPKARDLAARLRKR-WNVEFD--DAGAIGRRYRRQDEIGTPFCVTVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++     +    +   E++   R
Sbjct: 428 LEDDAVTVRERDTMSQERVSLDRVETYLFER 458


>gi|71892130|ref|YP_277862.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|71796236|gb|AAZ40987.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 408

 Score = 44.8 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 34/316 (10%), Positives = 79/316 (25%), Gaps = 7/316 (2%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           + +              + +     + ++Y I   N      I  +      D       
Sbjct: 64  MINHTLWKKTGHWDNYHEHIFTTSSESHEYCIKPMNCPGHIQIFNQGIKSYKDLPYRIAE 123

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ +   E   D+   F     +  E    +     I        +
Sbjct: 124 FGNCHRNEPSGSLHGL-MRTREFTQDDGHIFCTKTQIFDELNHCIKMMYDIYNTFGFKTI 182

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +    A   G + +   +E    +    N I        G  Y     +  +     
Sbjct: 183 LVKLSTRPAKRIGTDSIWDTAEQHLSTVLQHNNISFQYQPNDGAFYGPKIEFALLDSLDR 242

Query: 316 MNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
             +           ++      D   SR     +           + +  +         
Sbjct: 243 TWQCGTIQLDFSLPNLLNARYIDRHNSRVVPVMIHRAILGSMERFIGLITEEYAGFFPTW 302

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                  +  M+          +  + L    IR ++ L  ++  G +++Y   +  P  
Sbjct: 303 LAPTQ--VVLMNVTDQQSEYVSVIEKKLINKKIRTKVDL-RNEKIGFKIRYYTLQRIPYM 359

Query: 433 IIQGTGERSRGMLQIK 448
           +I G  E ++  + I+
Sbjct: 360 LICGNKEMNQNTVAIR 375



 Score = 41.4 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 10/152 (6%), Positives = 38/152 (25%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   IR   + Y +  +++P +    +L K     D  ++ +F+ 
Sbjct: 28  GMVFWHQNGWILLQELKKIIRTQLKEYKYQEVKSPTMIN-HTLWKKTGHWDNYHEHIFTT 86

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +      ++        +   +   +                 +            + 
Sbjct: 87  SSES-HEYCIKPMNCPGHIQIFNQGIKSYKDLPYRIAEFGNCHRNEPSGSLHGLMRTREF 145

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                       ++   +   ++ +    N +
Sbjct: 146 TQDDGHIFCTKTQIFDELNHCIKMMYDIYNTF 177


>gi|17232215|ref|NP_488763.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|17133860|dbj|BAB76422.1| threonyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 612

 Score = 44.8 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR  I D  R  +   G+  + TP +   D L K     D   + +F  
Sbjct: 237 GLVFWHPKGASIRYIIEDYWRKCHLESGYQLLYTPHVANLD-LWKTSGHFDFYQENMFDS 295

Query: 74  QDDDGQWISLRYDLTA 89
            + + Q   ++     
Sbjct: 296 MEVENQAYQIKPMNCP 311


>gi|315504260|ref|YP_004083147.1| glycyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315410879|gb|ADU08996.1| glycyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 459

 Score = 44.8 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 25/93 (26%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  +     K +     LR      E     +   G + +  D    P  +    
Sbjct: 366 VAVLPLSRNEALSPKAKQLATDLRKR-WVVEFDDSQA--IGRRYRRQDEIGTPFCVTVDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++     +    +   E +   R
Sbjct: 423 DTLDDNAVTVRNRDTMAQERVSLDQVERYLIER 455


>gi|262306387|gb|ACY45786.1| his-tRNA synthetase [Neogonodactylus oerstedii]
          Length = 149

 Score = 44.8 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 61/153 (39%), Gaps = 18/153 (11%)

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
              ++  +         +   +Y + +N+RK+LDG+    G+  +    +   +  A+DK
Sbjct: 6   MVPDVECIQIVDQILRKMNLGEYTLKVNHRKVLDGLFGSCGVPAE----KFRTICSAVDK 61

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE---LV 259
           LDK   + V+  + E              L  +  D +  ++ +  +  + E  +   L+
Sbjct: 62  LDKSPWEEVRKEMTE-----------QKGLNGDVADRIGEYVKLAGKAELIEQLKNDDLL 110

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKIS 292
             +   + G N+L ++ E  +    ++N +   
Sbjct: 111 SQSKDAQSGLNDLTLLFEYAKCLRCDTNLVFDM 143


>gi|302345856|ref|YP_003814209.1| glycine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149762|gb|ADK96024.1| glycine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 515

 Score = 44.8 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/234 (8%), Positives = 50/234 (21%), Gaps = 29/234 (12%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP------VMNEKQKPVVFG 326
                     G   +  +                 E  + F       + +     +   
Sbjct: 287 KHRLAWHEGLGMGDDNYRFHDHEKLAHYANAATDIEFHMPFGFKEVEGIHSRTNFDLSQH 346

Query: 327 SVGGGGRYDGLVSRFKGQNVP-----------ATGFSIGISRLIVALKS----LESSTNN 371
               G +             P                +  S    AL++    +      
Sbjct: 347 EKYSGRQVKYFDPERNENYTPYVVETSIGVDRMFLSVMCHSYTEEALENGSSRVVLKLPE 406

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  + +      K Q     L          + +  + G + +  D    P 
Sbjct: 407 PLAPVKCAVLPLVNKDGLPEKAQEIVNSL---KFHFNTHMEAKDSIGKRYRRQDAIGTPF 463

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
            +       +   + ++     K+    ++      E R     + I+ L+  +
Sbjct: 464 CVTVDGDTLTDNTVTLRYRDSMKQERVPVEKLREIIEDR-----VSITSLLKKI 512


>gi|167765976|ref|ZP_02438029.1| hypothetical protein CLOSS21_00467 [Clostridium sp. SS2/1]
 gi|167712333|gb|EDS22912.1| hypothetical protein CLOSS21_00467 [Clostridium sp. SS2/1]
 gi|291558770|emb|CBL37570.1| prolyl-tRNA synthetase, family I [butyrate-producing bacterium
           SSC/2]
          Length = 478

 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 59/185 (31%), Gaps = 11/185 (5%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                F     K   + +       +Y    S      +      +      + L     
Sbjct: 231 GTSHNFGDGFAKAFDIQYTDKDNKLQYVHQTSWGMSTRIIGAIIMVHGDDSGLVL----- 285

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I  +  +++  M      L K +   + L ++  + ++   S K+ G +    + R
Sbjct: 286 -PPRIAPVQTMIVPIMQKKEGVLDKAEEIRKRLVSS-YKVKVD-DSDKSPGWKFSEQEVR 342

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P  I  G  +  +    I      +++   +   E+     + Q+    ++++   KK
Sbjct: 343 GIPTRIEIGPKDIEKNQAVIVRRDTREKIIVSLDEIETKLGEVLEQM---QNDMLERAKK 399

Query: 488 ILQEN 492
            L+E+
Sbjct: 400 HLEEH 404


>gi|332798643|ref|YP_004460142.1| glycyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332696378|gb|AEE90835.1| glycyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 460

 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 22/62 (35%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           M   ++ + G + +  D    P A+           + I+D    ++   EI     + +
Sbjct: 396 MEYDNTGSIGKRYRRQDEIGTPFAVTIDFDSLEDNKVTIRDRDTMQQDRIEINQVRDYLK 455

Query: 469 AR 470
            +
Sbjct: 456 EK 457


>gi|195108339|ref|XP_001998750.1| GI23457 [Drosophila mojavensis]
 gi|193915344|gb|EDW14211.1| GI23457 [Drosophila mojavensis]
          Length = 1709

 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 65/205 (31%), Gaps = 22/205 (10%)

Query: 297  RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
              L      ++E +   P   +K              Y    S             +   
Sbjct: 1436 HHLGQNFSKMFEIVYEDPETQQK-------------TYVHQNSWGITTRTIGVMIMVHAD 1482

Query: 357  RLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
               + L    +    I     + + T D + ++ L   +     L  AG+R E     + 
Sbjct: 1483 NQGLVLPPHVACVQAIVVPCGITVNTKDEERAELLGACKELECRLSGAGVRCEGDYRDNY 1542

Query: 416  NFGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREARVAQI 474
            + G +  + + +  P+ I  G  +      + ++    G++L+  + + E    A +  I
Sbjct: 1543 SPGWKFNHWELKGVPIRIELGPKDMQAKQIVAVR-RDTGEKLTIAMADVEKKIPALLETI 1601

Query: 475  -----TIPISELVSTVKKILQENKE 494
                      +LVS   K+++   +
Sbjct: 1602 HGSMLNKAQLDLVSH-TKLVKSWAD 1625


>gi|283782116|ref|YP_003372871.1| glycyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283440569|gb|ADB19011.1| glycyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 537

 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 34/327 (10%), Positives = 79/327 (24%), Gaps = 24/327 (7%)

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDK 205
            +   +A   ++   +    +    +R+     +E        +   +    R +     
Sbjct: 235 RVPFGIAQVGKSFRNEITPKNFTFRSREFEQMEIEFFCHPSTSREWYQYWRDRRMKWYTD 294

Query: 206 FGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAG 265
            GL   +L L E   +    ++ G          + +    +LE   H     ++  + G
Sbjct: 295 MGLSTERLQLREHHVEELSHYSCGTADIEYAFPFLPAGEYGELEGIAHRGDFDLRSHMEG 354

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           +     L   S+   K     +         + L Y      E      +          
Sbjct: 355 K-----LDPNSKPDLKVELGPDGKPKHRGSGKDLTYRDDLTNERFTPHVIEPSAGADRAT 409

Query: 326 GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH 385
            +      ++       G         +                +         +  +  
Sbjct: 410 LAFLCEAYHEDQAPDENGVMQTRVVMKL----------------HPRIAPIKAAVFPLVK 453

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
                 K Q   + L+    R  +F       G + +  D    P  I           +
Sbjct: 454 KDGMPEKAQEIYRALKK---RYNVFYDEKGAVGRRYRRQDEAGTPFCITVDGQSLIDNTV 510

Query: 446 QIKDLAKGKELSREIKNNESWREARVA 472
            I+D    ++         +  E R+ 
Sbjct: 511 TIRDRDTLEQKRISADAVLAEIETRIG 537


>gi|254432589|ref|ZP_05046292.1| prolyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197627042|gb|EDY39601.1| prolyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 615

 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 25/75 (33%), Gaps = 2/75 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         R+  ++   +R   +  G      P ++ ++   +        +    +
Sbjct: 37  SGIYAYLPLLWRVLRKVSAIVREELDAIGALETLLPQMQPAELWQRSGRWSGYTDGEGIM 96

Query: 71  FSLQDDDGQWISLRY 85
           F L+D  G+ + L  
Sbjct: 97  FHLEDRQGRAMGLGP 111



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                I     +++     D+   +  +     L+ AG+   +   S +  G + K AD 
Sbjct: 497 RWPTPIAPFEVIVVVANGADATQAALGEQIYATLQQAGVDTLLDDRSERA-GVKFKDADL 555

Query: 427 RNCPLAIIQGTGERSRGMLQI 447
              P  ++ G      G +++
Sbjct: 556 IGIPWRVVVG-RGAPDGQVEL 575


>gi|170744367|ref|YP_001773022.1| threonyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198641|gb|ACA20588.1| threonyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 670

 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 82/276 (29%), Gaps = 18/276 (6%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIA----GEKGFNELVVIS 276
           D++  F   A L +E + I    LS   +    E+   +          +  ++    + 
Sbjct: 382 DDAHVFCTEAQLAAECLKINDLILSTYADFGFDEIVVKLSTRPEKRVGSDALWDHAEAVM 441

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRY-- 334
             V       +  +I + I  G   + G  +E +L   +  + Q            R+  
Sbjct: 442 TRVLSEIEEQSGGRIRTAINPGEGAFYGPKFEYVLRDAIGRDWQCGTTQVDFNLPERFGA 501

Query: 335 ---DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS 391
              D    +     V             + ++              V++ T+  D+D   
Sbjct: 502 FYVDADGQKKTPVMVHRAICGSMERFAGILIEHFAGHFPLWLAPLQVVVATITSDAD--P 559

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                      AG+RAE+ L + K          +A     P+ ++ G  E     + I+
Sbjct: 560 YASDVLAACEAAGLRAEIDLRNEKINYKVREH-SHA---KVPVMLVVGRREGEERTVSIR 615

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELVST 484
            L   +  +  +    +      A       + V+ 
Sbjct: 616 RLGSQQTRTLPLDQALADLVGEAATPDRRRRDAVAA 651


>gi|160943130|ref|ZP_02090367.1| hypothetical protein FAEPRAM212_00610 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445599|gb|EDP22602.1| hypothetical protein FAEPRAM212_00610 [Faecalibacterium prausnitzii
           M21/2]
          Length = 473

 Score = 44.8 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/118 (10%), Positives = 34/118 (28%), Gaps = 11/118 (9%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + + +  +    + P     +        K       L        +    + + G + +
Sbjct: 358 EDIRTVLHLHPALAPYKCAVLPLSKKLGEKAMEIRNELSKY---FMVDYDDTGSIGKRYR 414

Query: 423 YADRRNCPLAIIQG----TGERS----RGMLQIKDLAKGKELSREIKNNESWREARVA 472
             D    P  I         E         + ++D    +++   I   +S+ E+++ 
Sbjct: 415 REDEIGTPFCITVDFDTVGDEAKGIAADNCVTVRDRDTMEQVRMPISELKSYIESKIE 472


>gi|167464457|ref|ZP_02329546.1| prolyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 424

 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 57/197 (28%), Gaps = 27/197 (13%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL----- 362
           EA++      +       G+          ++R        T      +RLI A+     
Sbjct: 162 EAMMKDGKAVQAGTSHYLGTNFAEAFDIKFLNRENQHEFVHTTSWGVSTRLIGAMIMAHG 221

Query: 363 KSLESSTNNIKEMGPVLITTMDHD---SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                          V++  +         L+K       ++ AG R  +     ++ G 
Sbjct: 222 DDRGLVMPPKVAPTQVIMIPIGPAKTRDQVLAKTYELQTEIKKAGFRVRVDARE-QSPGW 280

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +    + R  P+ +  G  +   G + +     G++                    +   
Sbjct: 281 KFNEYEMRGVPVRVELGPRDMENGQVILVSRVTGEKKV------------------VAQD 322

Query: 480 ELVSTVKKILQENKEEI 496
            LV  + ++L E   ++
Sbjct: 323 NLVEEITRLLDEAHNQM 339


>gi|163735041|ref|ZP_02142478.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161391823|gb|EDQ16155.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 648

 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 41/391 (10%), Positives = 105/391 (26%), Gaps = 29/391 (7%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N  +I    + Y                +   +   +  G   +  +    + + +    
Sbjct: 273 NGWSIYTTLQDYMRRKQRAAGYQEVNTPQVVDRKLWEASGHWDKYQEHMFIVEVDEEHAR 332

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
                    +       +     K       ++ E     R        G+  V+     
Sbjct: 333 EKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRG---- 388

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D+   F +   + +E    +    S+  +    +   +         G  E     E
Sbjct: 389 FTQDDGHIFCREDQIEAECAAFITYLSSVYQDLGFEKFEIMFATRPEKRVGSEESWDHVE 448

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRY 334
              ++   +     +     G  Y     +   +AI         Q              
Sbjct: 449 AALENAIKATGHPYTLDAGEGAFYGPKLDFKLTDAIGREWQCGTFQVDPNLPERLDATFI 508

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
               ++ +   +           + + +++             V++ ++  D++      
Sbjct: 509 GEDGAKHRPYMLHRACLGSFERFIGILIENSAGKLPFWLAPRQVVVASIITDAN--DYVM 566

Query: 395 MYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                L+ AG+RAE  L + K        + G           P+ +  G  E     + 
Sbjct: 567 QVVDQLKAAGVRAEADLRNEKINYKVREHSVGK---------VPVILAVGAREVEEQTVT 617

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIP 477
           ++ L  G++ +  +++ E+  +A   + T P
Sbjct: 618 LRRL--GEKKT-TVESLEAVTQALGREATPP 645



 Score = 37.9 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 68/270 (25%), Gaps = 19/270 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   + D +R      G+  + TP +     L +     D+ 
Sbjct: 260 MQEEAP-GQVFWHPNGWSIYTTLQDYMRRKQRAAGYQEVNTPQVVDRK-LWEASGHWDKY 317

Query: 67  NKGVFSLQ-D----DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            + +F ++ D     +    +L+        +   +   +                 +  
Sbjct: 318 QEHMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPS 377

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
                                 + ++    A  +  +     D               EK
Sbjct: 378 GALHGIMRVRGFTQDDGHIFCREDQIEAECAAFITYLSSVYQDLG------------FEK 425

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             +    +  +R+    + D ++      +K        D       G  L  +  D + 
Sbjct: 426 FEIMFATRPEKRVGSEESWDHVEAALENAIKATGHPYTLDAGEGAFYGPKLDFKLTDAIG 485

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
                   +    L E +  T  GE G   
Sbjct: 486 REWQCGTFQVDPNLPERLDATFIGEDGAKH 515


>gi|159155613|gb|AAI54534.1| LOC562037 protein [Danio rerio]
          Length = 476

 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 64/202 (31%), Gaps = 25/202 (12%)

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
             L      ++E +   P    +++     S G              + +       G +
Sbjct: 206 HHLGQNFSRMFEIVFEDPKKPGEKQLAYQNSWG-----------ITTRTIGVLTMVHGDN 254

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             +V    +      I   G             L +   Y   L+ A IR +  L  + +
Sbjct: 255 MGLVLPPRVACLQVIIIPCGITATLPEAEKDLLLDQCSKYLSRLQKADIRVKADLRDNYS 314

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGM-LQIKDLAKGKELSREIKNNESWREARVAQIT 475
            G +  + + +  P+    G  +  +G  + ++    G++++ +  + E           
Sbjct: 315 PGWKFNHWELKGVPIRFEVGPKDLKQGQFVAVR-RDTGEKITVKEADAEK---------- 363

Query: 476 IPISELVSTVK-KILQENKEEI 496
             I  L+  ++  + +   +++
Sbjct: 364 -KIPNLLEEIQNNLFKRASDDL 384


>gi|224534482|ref|ZP_03675058.1| threonine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514159|gb|EEF84477.1| threonine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 581

 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + P+    +  ++             +  GIR ++   SS+    +++    +  P   
Sbjct: 480 WLSPIQAVIIPVNNAVEDYAIKVLNKFKNEGIRIKLDNTSSR-MNAKIREYQAKKIPYMF 538

Query: 434 IQGTGERSRGMLQIKDLAKGKELS-REIKNNESWREARVAQITI 476
           I G  E +   + I+     ++++  ++     +   ++    I
Sbjct: 539 IIGEREATEEKISIRT-RTNEQINGIKLDEAFEFILLKIRDKEI 581


>gi|119963161|ref|YP_947256.1| glycyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119950020|gb|ABM08931.1| glycyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 461

 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 5/92 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           +  +  + D   K +     LR    I        +   G + +  D    P  I     
Sbjct: 370 VLPLSRNEDLSPKAKALGAQLRKNWNI----DFDDAGAIGRRYRRQDEIGTPFCITVDFD 425

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 + I++     +    +   E +  AR
Sbjct: 426 TLEDQAVTIRERDTMSQERVSLDKVEGYLAAR 457


>gi|116669891|ref|YP_830824.1| glycyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116610000|gb|ABK02724.1| glycyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 461

 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 5/92 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           +  +  + D   K +     LR    I        +   G + +  D    P  I     
Sbjct: 370 VLPLSRNEDLSPKAKALGAQLRKNWNI----DFDDAGAIGRRYRRQDEIGTPFCITVDFD 425

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 + I++     +    +   E +  AR
Sbjct: 426 TLEDQAVTIRERDTMSQERVSLDKVEGYLAAR 457


>gi|329964612|ref|ZP_08301666.1| glycine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328525012|gb|EGF52064.1| glycine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 513

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 20/266 (7%), Positives = 56/266 (21%), Gaps = 29/266 (10%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+    E    E+   VK     +          +  +  G+  +  +           
Sbjct: 256 QFIFRMREFEQMEMQFFVKPGTELDWFKAWKETRLKWHKALGFGDDHYRYHDHDKLAHYA 315

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGG--------RYDGLVSRFKGQNVPATGFSI 353
                 E ++ F     +                     +Y    +              
Sbjct: 316 NAATDIEFLMPFGFKEVEGIHSRTNFDLSQHEKFSGKNIKYFDPETNESYTPYVIETSIG 375

Query: 354 GISRLIVALKSLESSTNNIKEMGPVL-------------ITTMDHDSDSLSKYQMYTQML 400
                +  + +             V+             +  +        K +     L
Sbjct: 376 VDRMFLSIMSASYCEEKLENGETRVVLRLPAALAPVKLAVMPLVKKDGLPEKAREIIDSL 435

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
                          + G + +  D    P  +           + +++    ++    I
Sbjct: 436 ---KFHFHCQYDEKDSIGKRYRRQDAIGTPYCVTVDHQTLEDNCVTLRNRDTMEQERVAI 492

Query: 461 KNNESWREARVAQITIPISELVSTVK 486
               +    R     + I+ L+ T++
Sbjct: 493 SELNNIIADR-----VSITSLLKTLQ 513


>gi|229087427|ref|ZP_04219561.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228695849|gb|EEL48700.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 455

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/238 (7%), Positives = 57/238 (23%), Gaps = 9/238 (3%)

Query: 241 VSFLSIDLE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRG 298
           + F     E  +         K  +       E + + +   +   + +           
Sbjct: 220 LEFFCKPGEDLEWFTFWRNTCKNWLLALGMNEESMRLRDHGEEELSHYSNATTDIEFKFP 279

Query: 299 LEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
             +       +   F +    +      +       +  V      ++ A   ++     
Sbjct: 280 FGWGELWGVASRTDFDLKRHMEHSNEDFNYIDPQTNERYVPYCIEPSLGADRVTLAFLCD 339

Query: 359 IVALKSLESSTNN----IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSS 414
               + LE+ +         + P     +                L       +     +
Sbjct: 340 AYEEEQLENDSRTVLRFHPALAPYKAAILPLSKKLSEGAGEVFAEL-AKDFVVDFD--ET 396

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + G + +  D    P  I           + ++D    +++   I   + + E ++ 
Sbjct: 397 GSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLEKKIQ 454


>gi|14601997|ref|NP_148542.1| prolyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|74581728|sp|Q9Y9G0|SYP_AERPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|5106029|dbj|BAA81340.1| prolyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 485

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +IR R+L+ +R + ++ G + +  PLL     L +           V
Sbjct: 34  PVKGMGVWMPYGFQIRRRVLEVVRGLLDSTGHEEVLFPLLIPEHLLRRESEHIRGFEGEV 93

Query: 71  FSLQDDDGQW-----ISLRY 85
           +      G+      ++LR 
Sbjct: 94  Y-WVTHGGREELDVKLALRP 112



 Score = 36.7 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 75/245 (30%), Gaps = 16/245 (6%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG------C 305
           + E+    +     E   +    + E +       +R+ I   I +  E+          
Sbjct: 156 LREVTTFKEAHTVHESFEDAERQVLEAIEVYKAIFDRLLIPYVISKRPEWDKFAGALYTI 215

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            ++ I+      +       G          +  R +  + P         R++ +L ++
Sbjct: 216 AFDTIMPDGRALQIGTVHHLGQSFTRAFDFRIQMRDERLDHPWQTSYGVSDRVVASLIAV 275

Query: 366 ESS------TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRT----AGIRAEMFLGSSK 415
                      ++  +  V+I     D +   K   YT         AG+R  +     +
Sbjct: 276 HGDDRGLVIPPSVAPIQVVVIPITPGDEEKRGKVLTYTAKAAEALEKAGLRVHVDDREWE 335

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             G +  Y + +  P+ +  G  E  +  L I      ++    +    +     +AQI 
Sbjct: 336 RPGAKFYYWEAKGVPIRVEIGLREAEQDTLTIARRDTLEKTEVPLGEAGNRIRELMAQIE 395

Query: 476 IPISE 480
             + E
Sbjct: 396 SSMRE 400


>gi|66809829|ref|XP_638638.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60467254|gb|EAL65287.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 548

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 33/79 (41%)

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
           SK +     L+ AGIR  +    + N G++  + + +  P+ I  G  + + G +     
Sbjct: 351 SKAKEIADQLKAAGIRVNLDNRPNYNPGHKYNHWELKGVPIRIEIGPKDVASGTVICCRR 410

Query: 451 AKGKELSREIKNNESWREA 469
              ++   EI N  +  + 
Sbjct: 411 DTAEKSKVEISNIVTGVKE 429


>gi|328710126|ref|XP_001950747.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 714

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/196 (9%), Positives = 57/196 (29%), Gaps = 7/196 (3%)

Query: 258 LVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMN 317
            ++ +   EK   EL +     ++   + N      T+  G   + G   +  +   +  
Sbjct: 487 HLRLSTRPEKYLGELEMWENAEKQLADSLNSFGEPWTLNPGDGAFYGPKIDITISDALKR 546

Query: 318 EKQKPVVFGSV-----GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
           + Q   +                    + +   +    F      + +  +S        
Sbjct: 547 QHQCATIQLDFQLPIRFNLNFISESGEKKRPVIIHRAIFGSVERMIAILTESFAGKWPFW 606

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                 ++  +    D  S+     + +  AG   ++ +        +++ A        
Sbjct: 607 LSPRQAIVIPVGPQFDEYSE--KVKKEIYEAGFMCDVDVDHGDTLNKKIRNAQLAQYNFI 664

Query: 433 IIQGTGERSRGMLQIK 448
           ++ G  E++   + ++
Sbjct: 665 LVVGDKEKTANTVNVR 680



 Score = 42.5 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 2/86 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ I++ Y   GF  + +P + Y+  L +         + +FS  D +
Sbjct: 337 FQPKGAHIYNTLIEFIKSEYRKRGFQEVVSPNI-YNVKLWQTSGHWAHYAENMFSF-DVE 394

Query: 78  GQWISLRYDLTAPLARYVAENFDTIV 103
            +  +L+                +  
Sbjct: 395 KETYALKPMNCPGHCLMFDHRNRSWR 420


>gi|304383920|ref|ZP_07366377.1| glycyl-tRNA synthetase beta subunit [Prevotella marshii DSM 16973]
 gi|304334998|gb|EFM01271.1| glycyl-tRNA synthetase beta subunit [Prevotella marshii DSM 16973]
          Length = 585

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 25/93 (26%), Gaps = 3/93 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K +     LR    +           G + +  D    P  +      
Sbjct: 488 VMPLVKKDGLPEKAREIVDALR---FKFNTHYDEKDAIGKRYRRQDAIGTPYCVTIDHNT 544

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                + ++     ++    I   ES  E +V+
Sbjct: 545 LQDNCVTLRFRDTMEQERVGIDRLESIIEDKVS 577


>gi|255012924|ref|ZP_05285050.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|298374179|ref|ZP_06984137.1| glycine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298268547|gb|EFI10202.1| glycine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 514

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 32/111 (28%), Gaps = 11/111 (9%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K +    MLR    R +       + G + +  D    P  I      
Sbjct: 415 VLPLVKKDGLPEKAEEIINMLR-FDFRCQ--YDEKDSIGKRYRRQDAIGTPYCITVDHDT 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                + I+     ++    I         +     + +  L   +KK+++
Sbjct: 472 LKDNCVTIRFRDTMEQERVSIDKLHDIITEK-----VSMKNL---LKKVIE 514


>gi|255019923|ref|ZP_05291997.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254970582|gb|EET28070.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 454

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +  +IR  I D  R  +   G++ + TP + + + L      +D     +F  
Sbjct: 72  GLVFWHPQGAQIRKVIEDYWRQAHLRGGYELLYTPHIAH-EKLWFTSGHKDFYADSMFQP 130

Query: 74  QDDDGQWISLRYDLTA 89
            +D+G+   L+     
Sbjct: 131 MEDEGEPYQLKPMNCP 146



 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 3/114 (2%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
           D   SR     V    F        + ++  E             +  +          Q
Sbjct: 310 DEDGSRRTPIMVHRAIFGSIERFFGILIEHYEGKFPLWLAPTQ--VVVLPISEHQADYAQ 367

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           M    L  AG+R E  L  ++  G +++    R  P   + G  E++ G + ++
Sbjct: 368 MVQSTLGAAGLRVESDL-RNEKIGYKIRAHTLRRVPFLAVVGEREKAAGEVALR 420


>gi|91217375|ref|ZP_01254335.1| prolyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184483|gb|EAS70866.1| prolyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 492

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 43/125 (34%), Gaps = 15/125 (12%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  + + L     K  +    L++ G+R +    ++   G + 
Sbjct: 291 GLVLPPNLAPIQVVIVPIFKNEEQLELVSEKANLIANDLKSKGVRVKFDNRTTHKPGWKF 350

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + +  PL I  G  +  +G +++             ++  S        +T+ I  L
Sbjct: 351 AEYELKGIPLRIAIGPKDLEKGTVEL-----------ARRDTLSKTFENQEGLTVVIENL 399

Query: 482 VSTVK 486
           +  ++
Sbjct: 400 LKDIQ 404


>gi|330836946|ref|YP_004411587.1| glycyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748849|gb|AEC02205.1| glycyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 444

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 17/221 (7%), Positives = 55/221 (24%), Gaps = 16/221 (7%)

Query: 271 ELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG 330
            + +  E +R   +  + +   +     +++     ++ + G     +          G 
Sbjct: 225 RMGIRPESLRWHQHGPDELAFYAKDAYDIQFLFPMGWQELEGVHSRTDYDLSQHQTFSGK 284

Query: 331 GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE-------------SSTNNIKEMGP 377
              Y    +  +         +     +++AL                    +       
Sbjct: 285 DQSYLDPETNDRYIPYVVETSAGLTRNVLMALSDAYDEEEIAPGDVRTVLHFHPAIAPVK 344

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +          Q   + LR       +F   S   G + +  D    P  +    
Sbjct: 345 VAVLPLVKKDGLDEYAQKLEKELRE---DYTVFFDRSGAIGRRYRRQDEIGTPYCVTVDY 401

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
                  + ++     +++   +    +  +  +     P 
Sbjct: 402 QTLEDNTVTLRFRDSMEQVRVPVAGIAARIKQEMKDYKRPQ 442


>gi|320547753|ref|ZP_08042037.1| proline--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447513|gb|EFW88272.1| proline--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 618

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 4/100 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKKIMREEFEKIGAVEMLAPALLNAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYR 110
           ++ D     L    + T   L R   +++  +       +
Sbjct: 97  KNRDKSDFILGPTHEETFTSLIRDAVKSYKQLPLNLYQIQ 136



 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 2/107 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      +IT    D ++ +        L   G    +   + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHVITVNVKDEEAQALTAKVEAELVEKGYEVLVDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P+ +  G    + G++++K  A G  +    +N     E    +
Sbjct: 572 IGLPIRVTVGKK-AADGIVEVKIKATGDTIEVNAENLIETLEILTKE 617


>gi|260590692|ref|ZP_05856150.1| proline--tRNA ligase [Prevotella veroralis F0319]
 gi|260537353|gb|EEX19970.1| proline--tRNA ligase [Prevotella veroralis F0319]
          Length = 493

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 71/257 (27%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L V ++   K         + S   R          EA+
Sbjct: 173 WQEGHTAHATREEAEKEAQTMLHVYADFAEKWLAVPVVQGVKSETERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           +++               +RLI AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKSFDVTYLNKDNKPEYVWATSWGVSTRLIGALIMTHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L    +K Q     LR  GI  +     +K  G   
Sbjct: 293 GLVLPPKIAPIQVVIVPIFKGEEQLKELTAKLQPVIDSLRELGITVKYDDTDNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+AD   +  P+ +  G  +     +                  E  R   + + ++   
Sbjct: 351 KFADYELKGVPVRLAMGGRDLENNTI------------------EFMRRDTLEKESVSFD 392

Query: 480 ELVSTVKKILQENKEEI 496
            +V  VK +L + ++ I
Sbjct: 393 GIVERVKALLDDIQDNI 409


>gi|212690852|ref|ZP_03298980.1| hypothetical protein BACDOR_00340 [Bacteroides dorei DSM 17855]
 gi|237712657|ref|ZP_04543138.1| glycyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237723598|ref|ZP_04554079.1| glycyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265752342|ref|ZP_06088135.1| glycyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212666581|gb|EEB27153.1| hypothetical protein BACDOR_00340 [Bacteroides dorei DSM 17855]
 gi|229438051|gb|EEO48128.1| glycyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229453978|gb|EEO59699.1| glycyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263237134|gb|EEZ22604.1| glycyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 513

 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 21/266 (7%), Positives = 57/266 (21%), Gaps = 29/266 (10%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+    E    E+   VK     E       +  +  +  G+  +  +           
Sbjct: 256 QFIFRMREFEQMEMQFFVKPGTELEWFPKWKEIRLKWHKALGFGDDHYRFHDHDKLAHYA 315

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGG--------RYDGLVSRFKGQNVPATGFSI 353
                 E ++ F     +                     +Y                   
Sbjct: 316 NAATDIEFLMPFGFKEVEGIHSRTNFDLSQHEKFSGKSIKYFDPELNESYTPYVIETSIG 375

Query: 354 GISRLIVALKSLESSTNNIKEMGPVL-------------ITTMDHDSDSLSKYQMYTQML 400
                +  + +  +          V+             +  +        K +     L
Sbjct: 376 VDRMFLSIMSAAYTEETLESGETRVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIMNDL 435

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
                          + G + +  D    P  I           + +++    ++    I
Sbjct: 436 ---KFHFHCQYDEKDSIGKRYRRQDAIGTPYCITVDHQTLEDNCVTLRNRDTMQQERVAI 492

Query: 461 KNNESWREARVAQITIPISELVSTVK 486
               +    +     + I+ L+ T++
Sbjct: 493 SELNNIIADK-----VSITSLLKTLQ 513


>gi|169629982|ref|YP_001703631.1| threonyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|238688903|sp|B1MCK6|SYT_MYCA9 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169241949|emb|CAM62977.1| Threonyl-tRNA synthetase [Mycobacterium abscessus]
          Length = 684

 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 35/112 (31%), Gaps = 19/112 (16%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +                L+  GIRAE+     +     + + ++R  P  +
Sbjct: 569 WLSPVQAVGIPIADAHAPYLNDIVSQLKAQGIRAEVDSSDDRMNKKIVNHTNQR-VPFLL 627

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           + G  +   G +  +      +++                  +P  E V+ +
Sbjct: 628 LAGDRDVEAGAVSFR-FRDRTQVNG-----------------VPRDEAVAAI 661


>gi|148238958|ref|YP_001224345.1| prolyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166980165|sp|A5GJD3|SYP_SYNPW RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|147847497|emb|CAK23048.1| Prolyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 594

 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 2/80 (2%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I     +++     D   ++  +   Q    AGI A +     +  G + K AD  
Sbjct: 489 WPLGIAPFQVIVVIAKIQDPTQVALAEELYQSFLDAGIDALLDDRDERA-GVKFKDADLI 547

Query: 428 NCPLAIIQGTGERSRGMLQI 447
             P  I+ G      G +++
Sbjct: 548 GIPWRIVVGRD-AGEGKVEV 566



 Score = 40.6 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 2/75 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         ++  +I   +R    + G      P L+ +D   +    +        +
Sbjct: 37  SGIYAYLPMMWKVLRKINAIVRAELNHLGALETLLPQLQPADLWERSGRWQGYTEGEGIM 96

Query: 71  FSLQDDDGQWISLRY 85
           F L+D   + + L  
Sbjct: 97  FHLEDRQNRQLGLGP 111


>gi|317036964|ref|XP_001398427.2| glycyl-tRNA synthetase 1 [Aspergillus niger CBS 513.88]
          Length = 738

 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 36/119 (30%), Gaps = 10/119 (8%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VLI  +          Q  T  LR  G+   +   SS + G   +YA  D    P  
Sbjct: 621 PTKVLIVPLSTHQSFAPLVQRLTTKLRRMGVSNRVD-DSSASIGK--RYARNDELGTPFG 677

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           +             ++D    K++           ++ V        E    V+K L E
Sbjct: 678 VTVDFQSVKDNTFTLRDRDSTKQVRASEDEIAQAIKSLVEG-----EETWEDVRKRLPE 731


>gi|149910913|ref|ZP_01899544.1| threonyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805980|gb|EDM65964.1| threonyl-tRNA synthetase [Moritella sp. PE36]
          Length = 513

 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 11/145 (7%), Positives = 41/145 (28%), Gaps = 2/145 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   + + IR     + +  ++ P +       K     D+ ++G+F  
Sbjct: 262 GMVFWHNDGWIIFRELENLIREKLREFDYQEVKGPQIMDRSLWEKS-GHWDKYSEGMFCT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             ++ +  +++        +   +   +                 +              
Sbjct: 321 HSEN-REYAIKPMNCPGHVQIYNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAV 158
               +     ++++   ++D ++ V
Sbjct: 380 TQDDAHIFCTESQIQKEVSDCIKMV 404


>gi|330829614|ref|YP_004392566.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas
           veronii B565]
 gi|328804750|gb|AEB49949.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas
           veronii B565]
          Length = 642

 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 81/319 (25%), Gaps = 11/319 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +        +      A  +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWERSGHWEKYAQAMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIMEEVSGCIRMVYDVYGTFGFEN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N +K       G  Y     +       
Sbjct: 416 IVVKLSTRPEQRIGSDEMWDRAEKALAEALELNGLKYDLQPGEGAFYGPKIEF---TLHD 472

Query: 315 VMNEKQKPVVFGSVGG-----GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
            ++   +              G  Y G  +      +        I R I  L    +  
Sbjct: 473 CLDRAWQCGTVQLDFALPGRLGATYVGENNDRHVPVMIHRAILGSIERFIGILTEEYAGL 532

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                     +  M+   +         + L  AG+RA+  L  ++  G +++    +  
Sbjct: 533 FPTWLAPTQAV-VMNITDNQADYAVKVAKALNDAGLRAKADL-RNEKIGFKIREHTLKRV 590

Query: 430 PLAIIQGTGERSRGMLQIK 448
           P  ++ G  E   G + ++
Sbjct: 591 PFMLVCGDKEVEAGKIAVR 609



 Score = 40.2 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 13/167 (7%), Positives = 44/167 (26%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR   + Y +  ++ P       L +     ++ 
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGP-FMMDRVLWERSGHWEKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 AQAMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   ++  +  V      +       K
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIMEEVSGCIRMVYDVYGTFGFENIVVK 419


>gi|325269446|ref|ZP_08136063.1| proline--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324988367|gb|EGC20333.1| proline--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 493

 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 71/257 (27%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L V ++   K         + S   R          EA+
Sbjct: 173 WQEGHTAHATREEAEKEAQTMLRVYADFAEKWLAVPVVQGVKSETERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           +++               +RLI AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKSFDVTYLNKDNKPEYVWATSWGVSTRLIGALIMTHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKY----QMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V +  +    + L +     Q     LR+ GI  +     +K  G   
Sbjct: 293 GLVLPPRIAPIQVAVIPIFKGEEQLKELSEKLQPVIDDLRSLGITVKYDDSDNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+AD   +  P+ +  G  +     +++                   R   + + ++   
Sbjct: 351 KFADYELKGVPVRLAMGGRDLENNTIEV------------------MRRDTLEKESVSFD 392

Query: 480 ELVSTVKKILQENKEEI 496
            +V  VK +L + ++ I
Sbjct: 393 GIVGRVKSLLDDIQDNI 409


>gi|312885526|ref|ZP_07745164.1| prolyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311301994|gb|EFQ79025.1| prolyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 490

 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 74/264 (28%), Gaps = 27/264 (10%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK----ISSTIVRGLEYYTGCVYEAI 310
             E        E+   E   +  +      N   +       +   R          EA+
Sbjct: 169 WQEGHTAHATAEEAIAETEQMLHVYADFAENWLALPVVRGRKTANERFAGALDTYCIEAL 228

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G            S+   Q           +RL+ AL        
Sbjct: 229 MQDGKALQAGTSHFLGQNFAKAFDVKFTSKEGKQEFVWATSWGVSTRLMGALVMAHSDDS 288

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L++        ++ L+   IR +     ++  G + 
Sbjct: 289 GLVLPPKLAPIQVVIVPIFRSEEELAQISEVADALSKALKAKNIRVKYDNRDTQRPGFKF 348

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI--KDLAKG------------KELSREIKNNESWR 467
              + +  PL +  G  + + G +++  +D                ++L  EI++N   +
Sbjct: 349 AEYELKGIPLRVAIGGRDLANGTVELARRDTKTKETVQQQGLAEQIEQLLVEIQDNIFQK 408

Query: 468 EARVAQITIPISELVSTVKKILQE 491
             +        +      K++L E
Sbjct: 409 ALKFRAENTREANTYDEFKQMLDE 432


>gi|76664827|emb|CAJ17850.1| threonyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 302

 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R  +   I +   +Y +  + TP++  ++   +     +   + +F +
Sbjct: 186 GLPFLLPKGATLRRIVERYIVDKELSYEYHHVYTPIMTNTELY-RISGHLEHYAENMFPV 244

Query: 74  QD-DDGQWISLRYDLTA 89
              + G+ + LR     
Sbjct: 245 MRLESGEQLVLRPMNCP 261


>gi|58697298|ref|ZP_00372664.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536340|gb|EAL59818.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 580

 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/254 (10%), Positives = 67/254 (26%), Gaps = 13/254 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   + N +   IR    N G+  ++TP+L   +   K     D+  + +F + + +
Sbjct: 263 WHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWEKS-GHWDKFRENMFIVDESE 321

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++        +    +  +                 +                  
Sbjct: 322 SKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDD 381

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +     + ++        + +    ++                +I +   D+ + R    
Sbjct: 382 AHIFCMEEQVNSETIKFCDLLKEVYSELG------------FNEISVKFSDRPDVRAGDD 429

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ +K  L+ VK                G  L     D +         +    L E
Sbjct: 430 EVWDRAEKALLEAVKEAGLSYELSPGEGAFYGPKLEFVLKDAIGRSWQCGTLQVDFILPE 489

Query: 258 LVKGTIAGEKGFNE 271
            +     G  G   
Sbjct: 490 RLGAFYIGADGHKH 503


>gi|332520154|ref|ZP_08396618.1| glycyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332044713|gb|EGI80907.1| glycyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 523

 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/267 (10%), Positives = 67/267 (25%), Gaps = 24/267 (8%)

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           G    +E +     F   + E+   + +          + + E  +   L    G  + R
Sbjct: 255 GKAFRNEIVARQFIFRMREFEQMEMQFFIKPGTQGEWYEHWKETRMKWHLSLGMGAENYR 314

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPA 348
                 +    +      ++   GF  +        F            +  F  ++  +
Sbjct: 315 FHDHEKLAHYADAAADIEFKFPFGFKELEGIHSRTDFDLKAHEEHSGKKLQYFDHEDNAS 374

Query: 349 TGFS----------IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLS------- 391
                         + ++    AL   E   N  + +  +        +  L        
Sbjct: 375 YTPYVLETSIGLDRMFLAVFSNALVEEELENNTTRTVLKLPAVLAPFKAAILPLVKKDGL 434

Query: 392 --KYQMYTQML-RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +   + L     +            G + +  D    P  I           + I+
Sbjct: 435 PDVAKKIVEDLKWDFNVT----YDEKDAVGRRYRRQDANGTPFCITVDHDTLEDNTVTIR 490

Query: 449 DLAKGKELSREIKNNESWREARVAQIT 475
                ++   +I++ +S  +  V   T
Sbjct: 491 HRDTMEQSRVKIEDLKSIIKKEVDVKT 517


>gi|213403660|ref|XP_002172602.1| glycyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212000649|gb|EEB06309.1| glycyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 653

 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGT 437
           I  +  +++     +  +  LR  GI  ++   S+ N G   +YA  D    P  I    
Sbjct: 540 IVPLSKNAEFDPLVRQLSAKLRRNGISNKVD-DSNANIGR--RYARNDELGTPFGITVDF 596

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
                  + +++    K++        +     +A  T
Sbjct: 597 DSLKDNTVTLRERDSTKQIRGTDDEIVATLVQLIAGHT 634


>gi|8927565|gb|AAF82120.1|AF276071_4 probable histidyl tRNA synthetase [Thermus aquaticus]
          Length = 31

 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 5/31 (16%), Positives = 12/31 (38%)

Query: 7  LRAELPRGFADCPTKEIRIRNRILDSIRNIY 37
          +  ++PRG  D    +      +    R++ 
Sbjct: 1  MAFQIPRGTQDVLPGDSEKWQYVEHIARSLC 31


>gi|187918238|ref|YP_001883801.1| glycyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689287|sp|B2S075|SYG_BORHD RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|119861086|gb|AAX16881.1| glycyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 445

 Score = 44.4 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 7/63 (11%), Positives = 19/63 (30%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           MF   +   G + +  D    P  +           + ++      ++   I +  S+  
Sbjct: 374 MFYDDNGTIGKRYRRQDEIGTPYCVTVDYDSIENKTVTLRHRDTMTQVRIPINDLYSYVR 433

Query: 469 ARV 471
             +
Sbjct: 434 TEI 436


>gi|21322023|gb|AAL40867.1| PylS [Methanosarcina barkeri]
          Length = 419

 Score = 44.4 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 58/147 (39%), Gaps = 21/147 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRN----------------RILDSIRNIYENYGFDPIET 47
           + K+   + + F +   + +  R                 ++   I   + + GF  I++
Sbjct: 170 EDKISLNMAKPFRELEPELVTRRKNDFQRLYTNDREDYLGKLERDITKFFVDRGFLEIKS 229

Query: 48  PLLEYSDSLGKFLPDED-RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC 106
           P+L  ++ + +   + D   +K +F + D +   + LR  L   L  Y+ +    +  P 
Sbjct: 230 PILIPAEYVERMGINNDTELSKQIFRV-DKN---LCLRPMLAPTLYNYLRKLDRILPGPI 285

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + + +GP +R E  G     +F   + 
Sbjct: 286 KVFEVGPCYRKESDGKEHLEEFTMVNF 312


>gi|320162939|gb|EFW39838.1| prolyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 788

 Score = 44.4 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R    +   I    E  G      P+L   + L           + VF L
Sbjct: 160 GIYALTPVGLRALENVTRIICEELELVGAQRTALPMLMTKE-LWDKTGRWTSSGQEVFRL 218

Query: 74  QDDDGQWISLRY 85
           QD  G+ + L  
Sbjct: 219 QDRKGRDMLLGP 230


>gi|270610574|ref|ZP_06221671.1| threonine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270318077|gb|EFA29334.1| threonine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 151

 Score = 44.4 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 4/94 (4%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+         Q   + L   G+R +  L  ++  G +++    R  P  ++ G  E 
Sbjct: 58  VVMNITDSQADYVQKVAKQLSDVGLRVKTDL-RNEKVGFKIREHTLRRVPYMLVCGDKEI 116

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           + G + ++     K         E + E    Q+
Sbjct: 117 AEGKVAVR---TRKGADLGTFTVEEFAEILKNQV 147


>gi|256838464|ref|ZP_05543974.1| glycyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256739383|gb|EEU52707.1| glycyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 514

 Score = 44.4 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 32/111 (28%), Gaps = 11/111 (9%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K +    MLR    R +       + G + +  D    P  I      
Sbjct: 415 VLPLVKKDGLPEKAEEIINMLR-FDFRCQ--YDEKDSIGKRYRRQDAIGTPYCITVDHDT 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                + I+     ++    I         +     + +  L   +KK+++
Sbjct: 472 LKDNCVTIRFRDTMEQERVSIDKLHDIITEK-----VSMKNL---LKKVIE 514


>gi|159030629|emb|CAO88297.1| thrS [Microcystis aeruginosa PCC 7806]
          Length = 599

 Score = 44.4 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  +      L   +  T  ++  GIRAE    S +  G  ++ A+    P+  
Sbjct: 497 WLAPVQIRLLPVSDSQLDYAKEVTVKMQLLGIRAETD-TSGERLGKMIRNAETAKIPVMA 555

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           + G  E     L I+  A G      ++   +  E+ + 
Sbjct: 556 VVGAKEMESNSLSIRTRAAGDLGVISVEEVVAKLESAIQ 594



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   IR+ + D ++      G+ P+ TP +   D   K      +  + +F +
Sbjct: 213 GLPLWTPKGTLIRSLLEDFLKKEQLKRGYLPVVTPHIARVDLF-KISGHWQKYKEDMFPM 271

Query: 74  QDDDGQW 80
             DD + 
Sbjct: 272 MADDEES 278


>gi|53803705|ref|YP_114445.1| prolyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81823621|sp|Q606K3|SYP_METCA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|53757466|gb|AAU91757.1| prolyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 583

 Score = 44.4 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 38/106 (35%), Gaps = 4/106 (3%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +L  G        +++  R+   +R   +  G   +  P+++ ++ L +     ++    
Sbjct: 34  KLAAGLYTWLPLGLKVLRRVERVVREEMDRAGALEVLMPVVQPAE-LWQESGRWEQYGPE 92

Query: 70  VFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIG 112
           +  L D   +   L     ++   LAR   +++  +       +  
Sbjct: 93  LARLHDRHDRAFCLGPTHEEIITDLARNELKSYRQLPVNFYQIQTK 138


>gi|331698238|ref|YP_004334477.1| glycyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952927|gb|AEA26624.1| glycyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 465

 Score = 44.4 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      E     +   G + +  D    P  I      
Sbjct: 374 VLPLSRNADLSPKARDLAAALRR-NWNVEFD--DAGAIGRRYRRQDEIGTPFCITVDFDT 430

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +   + I++     +    +   ES+  AR
Sbjct: 431 LTDQAVTIRERDTMSQERIALDQVESYLAAR 461


>gi|260831390|ref|XP_002610642.1| hypothetical protein BRAFLDRAFT_117885 [Branchiostoma floridae]
 gi|229296009|gb|EEN66652.1| hypothetical protein BRAFLDRAFT_117885 [Branchiostoma floridae]
          Length = 1596

 Score = 44.4 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 14/110 (12%)

Query: 388  DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-LQ 446
              + K Q Y Q LR AGIRA   L  + + G +  + + +  P+ +  G  +  +   + 
Sbjct: 1404 KLMKKCQEYRQALRDAGIRATDDLRDNYSPGWKFNHWELKGTPIRMEVGPRDMKQNQFVA 1463

Query: 447  IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKIL-QENKEE 495
            ++    G++++                    I E++ T++  L    K++
Sbjct: 1464 VR-RDTGEKMTLAEGKAAE-----------KIKEILDTIQTDLYSRAKKD 1501


>gi|254423005|ref|ZP_05036723.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196190494|gb|EDX85458.1| threonyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 618

 Score = 44.4 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 34/108 (31%), Gaps = 3/108 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      + + ++              V +  +          +     +R  G R
Sbjct: 491 HRAPFGSLERLIGILIEQYAGDFPLWLAPEQVRLLPVA--ESHWEYAERAAIDMRKLGAR 548

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
            E+   S +  G  ++ +++   P+  + G  E +   L I+   +G 
Sbjct: 549 VEVD-KSGERLGKMIRNSEKAKIPVMSVIGDQEVTDNTLSIRTRKEGD 595


>gi|67605980|ref|XP_666722.1| threonyl-tRNA synthetase [Cryptosporidium hominis TU502]
 gi|54657772|gb|EAL36495.1| threonyl-tRNA synthetase [Cryptosporidium hominis]
          Length = 763

 Score = 44.4 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 3/105 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+ N+++D IR+ Y    F  + TP +   D L K         + +F   D +
Sbjct: 358 WLPAGARLYNKLMDFIRSEYRIREFTEVITPNIFSCD-LWKTSGHYFAYKENMFIF-DVE 415

Query: 78  GQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            +   L+          +   N      P R    G + RNE  G
Sbjct: 416 EKEWGLKPMNCPGHCVMFKHMNPSYRQLPIRLADFGVLHRNEFSG 460


>gi|327462766|gb|EGF09088.1| proline--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 616

 Score = 44.4 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKRIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D ++L+        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|189219987|ref|YP_001940627.1| Threonyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186845|gb|ACD84030.1| Threonyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 611

 Score = 44.4 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 40/130 (30%), Gaps = 3/130 (2%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
               F      L + ++  E           V +  +      ++  +   ++L+    R
Sbjct: 485 HRAPFGSLERFLAILIEHYEGHFPLWLAPEQVRVIPVSDG--LIAYGEKIKEILQQNRFR 542

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESW 466
             +   +    G +++ A  +  P  +I G  E     + ++   KG      +    S 
Sbjct: 543 VSLDRKND-TLGAKIRVAQLQKVPYMLIVGKKEEQMSRVSVRTSKKGNIGEMSLDTFISL 601

Query: 467 REARVAQITI 476
             A   +  +
Sbjct: 602 ITAEYKERRV 611



 Score = 39.8 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 14/47 (29%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           G      K   IR  + + +       G+  + TP +   D      
Sbjct: 208 GLPLWLPKGAVIRRELQNFLTEELLQRGYQLVYTPHIGSLDLFRTSG 254


>gi|26554256|ref|NP_758190.1| prolyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81846191|sp|Q8EUW7|SYP_MYCPE RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|26454265|dbj|BAC44594.1| prolyl aminoacyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 470

 Score = 44.4 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN- 462
           G + + +    K+ G QL+  + +  P  +I G  E     + I      ++ +   K  
Sbjct: 311 GYKYQTYFVE-KSLGLQLQENEIKGIPFQLILGKKEIENNTITIYRRDTREKQNISFKEF 369

Query: 463 NESWREARVAQITIPISELVSTVKKILQENKE 494
           N+++ E  + + +   S L +  +K L  + E
Sbjct: 370 NQNFIENLIKEYS---SNLFNKTEKRLNSSIE 398


>gi|125718857|ref|YP_001035990.1| prolyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|152112958|sp|A3CQI5|SYP_STRSV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|125498774|gb|ABN45440.1| Prolyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 616

 Score = 44.4 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKRIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 38.3 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D ++L+        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|310789482|gb|EFQ25015.1| glycyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 664

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 1/103 (0%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
            S         VLI  +  +          +Q LR  GI A +   SS   G +    D 
Sbjct: 535 LSFPPTVAPTKVLIVPLSANKQFQPFINKISQKLRKIGISARVD-SSSATIGKRYSRNDE 593

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
              PL I           + ++D    K++  + +   +  ++
Sbjct: 594 LGTPLGITIDFQTVQDSTITLRDRDSTKQVRADEETIVAAIQS 636


>gi|307106736|gb|EFN54981.1| hypothetical protein CHLNCDRAFT_24199 [Chlorella variabilis]
          Length = 572

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 13/114 (11%)

Query: 386 DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGML 445
               ++  Q     LR AG+R ++   + +  G +    + +  P+ +  G  +  +G  
Sbjct: 390 GEAVMAAVQRLEAALRGAGVRVQVDASTDRTPGWKFNQYEMKGVPVRVEVGPRDVEQGTC 449

Query: 446 QI--KDL--AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
               +D+   +GK+    ++     +             L+  ++  L     +
Sbjct: 450 VTARRDVAGKEGKQFGVPLEPAAFVQHVTA---------LLEDIQAALLRQARD 494


>gi|296242907|ref|YP_003650394.1| glycyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095491|gb|ADG91442.1| glycyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 581

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 36/115 (31%), Gaps = 9/115 (7%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR-------TAGIRAEMFLGSSK 415
           +  ++      ++ P  +      + S  +++   ++ R        AG           
Sbjct: 463 REEKTVLALPPQIAPYHVAVFPLVTGSKPEHRRIVELARKTYWDLINAGFNCI--YDDDG 520

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           + G +    D    PLA+           + ++D    ++    + N + +   +
Sbjct: 521 SIGRRYARVDEIGVPLAVTVDYQSIEDETVTVRDRDTTQQERVHLGNLKKYLAEK 575


>gi|259418221|ref|ZP_05742139.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345616|gb|EEW57460.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 648

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 73/263 (27%), Gaps = 23/263 (8%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D+   F     + +E  + +     +  +    +    +        G  E    +E   
Sbjct: 392 DDGHIFCTEEQVEAETKEFVSFLAKVYQDLGFEKWRVKLSTRPEKRVGTEESWDQAEAAL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
            +G  +   +       G  Y     +   +AI         Q                 
Sbjct: 452 AAGIQAAGYEYELQEGEGAFYGPKLEFVLTDAIGRDWQCGTLQIDPNLPERLDATYIGQD 511

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +           + + ++              V++ ++  ++D         
Sbjct: 512 GDKHRPLMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSEAD--DYVNEVV 569

Query: 398 QMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
             LR AG+RAE  + + K        + G           P+ +  G  E     + ++ 
Sbjct: 570 ATLRAAGVRAEADIRNEKINYKVREHSVGK---------VPVILAVGHREVEERTVSVRR 620

Query: 450 LAKGKELSREIKNNESWREARVA 472
           L + K+   E   N +   A+ A
Sbjct: 621 LGE-KQTKVESLTNVTEELAKAA 642



 Score = 37.9 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G         RI   + D +R + +  G+  + TP +     L +     D  
Sbjct: 260 MQEEAP-GMVFWHPNGWRIYTTLQDYMRRMQDKGGYVEVNTPQVVNRK-LWEASGHWDNY 317

Query: 67  NKGVF 71
            + +F
Sbjct: 318 QENMF 322


>gi|227513178|ref|ZP_03943227.1| prolyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083559|gb|EEI18871.1| prolyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 569

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 68/262 (25%), Gaps = 12/262 (4%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+  +I   +R   E      +  P +  ++ L K     +     
Sbjct: 34  QISAGMYAYLPLAYRVLTKIETIVRQEMEKTSAHEMLMPDVLPAE-LWKESGRYETYGPE 92

Query: 70  VFSLQDDDGQWISLRY--DLT-APLARYVAENFDTIV----FPCRTYRIGPVFRNEKHGP 122
           +F  ++       L    + T   L R   +++  +          YR     R      
Sbjct: 93  LFKFKNRHDTDFILGPTHEETFTELIRDSIKSYKQLPLVLYQIQNKYRDEDRPRYGLLRS 152

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
             F            +  + A   M        + +G+K              D      
Sbjct: 153 REFIMKDAYSFAANEADLDDAYCAMEKAYRTIFDRIGLKYRVIIGDGGAMGGSDSKEFSA 212

Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
                +              L+         +  E  T+   D  K A    + ID +  
Sbjct: 213 MAAVGEDTIVYSDESDYFANLEMAKS----KVTDEPSTEAEADLKKVATPNVKSIDEVAD 268

Query: 243 FLSIDLEKSMHELYELVKGTIA 264
           FL +  +K++  +  +      
Sbjct: 269 FLGVSTKKTIKSMLYIADEKPV 290



 Score = 43.7 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 3/102 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++   +  ++      + L   GI   +     +  G + 
Sbjct: 458 DENGLVWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTENGIEVLVDDRRER-PGVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             +D    PL I  G      G+++IK    G+ +  +++  
Sbjct: 517 ADSDLLGIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEEL 557


>gi|77360339|ref|YP_339914.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|76875250|emb|CAI86471.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 636

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 87/324 (26%), Gaps = 11/324 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD--KLNE 192
            +  S                  V  KR      +N    +    + +  + D   ++ E
Sbjct: 298 MMDRSLWEKSGHWEKYADAMFTTVSEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAE 357

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                R        GL  V+        D++  F     +  E    +            
Sbjct: 358 FGCCHRNEPSGALHGLMRVRG----FTQDDAHIFCTEEQIMDEVSACIKMVYDTYETFGF 413

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
            ++   +        G + +   +EL        N I+       G  Y     +     
Sbjct: 414 EKIVVKLSTRPEQRIGEDHMWDKAELALAEALKLNEIEFDYLPGEGAFYGPKIEFTLYDC 473

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTN 370
                +    V       G      V+    +  P       +G     + + + E +  
Sbjct: 474 LDRAWQCG-TVQLDFALPGRLGATYVAENNERRTPVMIHRAILGSIERFIGILTEEYAGL 532

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P  +  M+         +   Q L   GIRA   L  ++  G +++    +  P
Sbjct: 533 FPTWLAPKQVVIMNITDKQADYVKEVVQKLNKLGIRATADL-RNEKIGFKIREHTLKRIP 591

Query: 431 LAIIQGTGERSRGMLQIKDLAKGK 454
             ++ G  E  +  + ++    G+
Sbjct: 592 YLLVVGDKEVEQQEVAVRT-RTGE 614



 Score = 40.6 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 11/183 (6%), Positives = 46/183 (25%), Gaps = 10/183 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   + D +R     Y ++ ++ P++       K     ++    +F+ 
Sbjct: 262 GMVFWHNDGWSIYRELEDFVREKLREYDYEEVKGPMMMDRSLWEKS-GHWEKYADAMFTT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
              + +  +++        +   +   +                 +              
Sbjct: 321 V-SEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALHGLMRVRGF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
               +     + ++   ++  +                    + I+ K+    + ++ E 
Sbjct: 380 TQDDAHIFCTEEQIMDEVSACI--------KMVYDTYETFGFEKIVVKLSTRPEQRIGED 431

Query: 194 LIV 196
            + 
Sbjct: 432 HMW 434


>gi|57242133|ref|ZP_00370073.1| prolyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017325|gb|EAL54106.1| prolyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 568

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 23/74 (31%), Gaps = 3/74 (4%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPL-LEYSDSLGKFLPDEDRPNKGVF 71
            G  +       + ++I + I+   +  G   +ET L      S  +     +   K + 
Sbjct: 37  SGLYNFLPLGKMVYSKIENIIKEEMDKAGA--LETSLSFTTPASFWQESGRYNVFGKELL 94

Query: 72  SLQDDDGQWISLRY 85
             +D       L  
Sbjct: 95  RFKDRKENDFVLGP 108



 Score = 41.7 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               +     V+I +   D  +L+      + LR  GI   +   + + +G ++   +  
Sbjct: 466 WQEALSPFKLVIILSNIKDEKALNLGISLYEDLRKLGINVLLDDRNER-YGVKMNDFELM 524

Query: 428 NCPLAIIQGTGERSRGMLQI---KDLAK 452
               A+I G        L++   KDL+K
Sbjct: 525 GFNYALIIGKS-LENNELELVKRKDLSK 551


>gi|260425980|ref|ZP_05779959.1| threonyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260420472|gb|EEX13723.1| threonyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 649

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/261 (10%), Positives = 65/261 (24%), Gaps = 22/261 (8%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E    +     I  +         +        G  E     E   
Sbjct: 392 DDAHIFCTFDQIEEESKKFIDFLAKIYADLGFDSWRVKLSTRPEKRVGSEESWDSMEEAL 451

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
            +   +   +       G  Y     +   +AI         Q                 
Sbjct: 452 ANACKAAGREFEIFPGEGAFYAPKLEFVLTDAIGRDWQCGTLQLDPNLPERLDANYVGQD 511

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +           + + ++              V++ ++  ++D         
Sbjct: 512 GEKHRPIMLHRAVLGSFERFIGILIEEHSGKLPFWLAPRQVVVASITSEAD--DYVHEAV 569

Query: 398 QMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
             LR AG+RAE  + + K        + G           P+ +  G  E     + ++ 
Sbjct: 570 AALRAAGVRAEADVRNEKINYKVREHSLGK---------VPVILAVGHREVEERTVTVRR 620

Query: 450 LAKGKELSREIKNNESWREAR 470
           L + +   R +    +     
Sbjct: 621 LGEKQTQVRSLDEIAAELGTE 641


>gi|254796740|ref|YP_003081576.1| prolyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589987|gb|ACT69349.1| prolyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 436

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 14/162 (8%), Positives = 41/162 (25%), Gaps = 8/162 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +++   I   IR   ++ G   +  P ++ +    +     D   + +   
Sbjct: 42  GLYSWLPLGLKVLKNIESIIRQELDSMGMHEMLMPCIQLAKLWEESGRYSD-YGRELLKF 100

Query: 74  QDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HGPGRFR 126
           +D     +       ++   + R    ++  +       +                  F 
Sbjct: 101 KDRHDNELLFGPTNEEVITAIVRDDLASYKQLPKILYHIQWKFRDEIRPRFGLMRAREFL 160

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
                  D    SA  +  ++        + +G+        
Sbjct: 161 MKDAYSFDVDQQSARISYNKVYQSYLRIFKRLGLNPIPCRAN 202



 Score = 37.1 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 29/83 (34%), Gaps = 5/83 (6%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           +      + + P  +  ++   +S    +     L      + ++  ++ + G +    D
Sbjct: 337 DKGIIWPESIAPFKVGLINLHEESCGLAEEIFSKL-----DSVIYDDTTDSQGVKFARMD 391

Query: 426 RRNCPLAIIQGTGERSRGMLQIK 448
               P  II G      G +++K
Sbjct: 392 LIGVPFQIIVGKNAIIDGTVELK 414


>gi|154150357|ref|YP_001403975.1| glycyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|153998909|gb|ABS55332.1| glycyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 573

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 29/99 (29%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +       V +  +       +     T  L+  GI AE     S   G + +  D 
Sbjct: 461 LRFSPQVAPVQVAVFPLMARDGLDTLAGEITATLQKQGILAE--YDDSGAIGRRYRRQDE 518

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P AI      +    + ++D    K++   +     
Sbjct: 519 IGTPFAITVDYDSKENHTVTLRDRDSMKQVRIAVDKIPE 557


>gi|150009785|ref|YP_001304528.1| glycyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|149938209|gb|ABR44906.1| glycyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 514

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 32/111 (28%), Gaps = 11/111 (9%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K +    MLR    R +       + G + +  D    P  I      
Sbjct: 415 VLPLVKKDGLPEKAEEIINMLR-FDFRCQ--YDEKDSIGKRYRRQDAIGTPYCITVDHDT 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                + I+     ++    I         +     + +  L   +KK+++
Sbjct: 472 LKDNCVTIRFRDTMEQERVSIDKLHDIITEK-----VSMKNL---LKKVIE 514


>gi|313115472|ref|ZP_07800937.1| glycyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622182|gb|EFQ05672.1| glycyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 473

 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 11/118 (9%), Positives = 34/118 (28%), Gaps = 11/118 (9%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           + + +  +    + P     +        K       L        +    + + G + +
Sbjct: 358 EDIRTVLHLHPALAPYKCAVLPLSKKLGEKAMEIRNELSKY---FMVDYDDTGSIGKRYR 414

Query: 423 YADRRNCPLAIIQG----TGERS----RGMLQIKDLAKGKELSREIKNNESWREARVA 472
             D    P  I         E         + ++D    +++   I   +++ E+++ 
Sbjct: 415 REDEIGTPYCITVDFDTVGDEAKGIAADNCVTVRDRDTMEQVRMPISELKAYIESKIE 472


>gi|290981498|ref|XP_002673467.1| predicted protein [Naegleria gruberi]
 gi|284087051|gb|EFC40723.1| predicted protein [Naegleria gruberi]
          Length = 670

 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/143 (9%), Positives = 43/143 (30%), Gaps = 3/143 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y    +  + + +  +   +  +   +AL +          + P     +         
Sbjct: 529 TYTSSDNSAESKPICISSTILNNTETFMALSAERYGGKWPFWLSPRQAIIIPICEKCSEY 588

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
                  +  AG   ++ +        +++ A        +I G  E     + ++ +  
Sbjct: 589 ANNVKDRIHQAGYYVDVDMSFH-TIEKKIRNAHLAQYNYILIIGVSEMETDCVNVR-IRD 646

Query: 453 GKELSRE-IKNNESWREARVAQI 474
           G++   + I+      E ++ + 
Sbjct: 647 GEQEGVKSIQELLEEFEVKIREF 669


>gi|262276749|ref|ZP_06054542.1| threonyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262223852|gb|EEY74311.1| threonyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 637

 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 41/372 (11%), Positives = 100/372 (26%), Gaps = 16/372 (4%)

Query: 97  ENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLE 156
           +   ++      +                    +   +  G   +  +        +   
Sbjct: 268 QKGWSLFQSLVKFMRDKQTDAGYLEVNTPEMLDKTLWEKSGHWEKFQEHMYTTDADEKTF 327

Query: 157 AVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLG 216
           A+       HI + N+ +      K       K++E   V R        GL  V+    
Sbjct: 328 AIKPMNCPGHIQVFNQGL------KSYKDLPLKISEFGKVHRYEPSGALHGLMRVRA--- 378

Query: 217 EGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVIS 276
               D++  F     +T E + +    L I        +            G +++   S
Sbjct: 379 -FTQDDAHIFCTEEQITEESLKVTNLILDIYKSFGFKNVKLKFSDRPEKRVGDDKIWNKS 437

Query: 277 ELVRKSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGR 333
           E        ++ +K       G  Y     +   +AI         Q         G   
Sbjct: 438 EKALLDAIKTSGLKYEINKGEGAFYGPKIEFVLIDAIGRDWQCGTLQVDFNLPGRLGASY 497

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
                S+     +    F      + + ++              V +  + +  +  +  
Sbjct: 498 VANDGSKKIPVMLHRAMFGSLERFIGILIEHHTGKFPFWLSPEQVAVLPISNKQNDYASK 557

Query: 394 QMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKG 453
                 L   G+R+ +    ++    +++       P+ +I G  E     + I+ L + 
Sbjct: 558 VKLL--LEKKGLRSIID-DRNEKINYKIREHSVSKIPVLMICGAKEVQNNTITIRRLGQT 614

Query: 454 KELSREIKNNES 465
            + +  ++   +
Sbjct: 615 NQQTVSLEEAVT 626


>gi|324989750|gb|EGC21693.1| proline--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 616

 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.5 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D D+++        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEDAVALTDQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|298530062|ref|ZP_07017464.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509436|gb|EFI33340.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 646

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    M+                R  GIR E+    ++  G +++ A     P  +
Sbjct: 535 WLAPVQARIMNITDAQAGYVHDCADRFRQMGIRVEVD-DRNEKLGYKVREAQMEKIPYVL 593

Query: 434 IQGTGERSRGMLQIKDLAKGK 454
           + G  E     L ++ L  GK
Sbjct: 594 VAGDQEVQESGLNVR-LRGGK 613


>gi|54295556|ref|YP_127971.1| threonyl tRNA synthetase [Legionella pneumophila str. Lens]
 gi|73919803|sp|Q5WT82|SYT_LEGPL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53755388|emb|CAH16884.1| Threonyl tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 637

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +RN   ++G+  I TP L       K           +F  
Sbjct: 261 GMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKS-GHWANFRDEMFVT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
           + ++ +  +++        +    +           
Sbjct: 320 ETEN-RHYAVKPMSCPCHVQIY-NHGLKSYRDLPLR 353



 Score = 41.4 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +          +   + L+  G+RA   L  ++  G +++    +  P  +
Sbjct: 535 WLSPVQAVVLTISEKQNEYAEKVRKTLQKRGVRANFDL-RNEKIGFKIREHTLQKIPYLL 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  E     + ++
Sbjct: 594 VVGDKEVENCQVAVR 608


>gi|13541912|ref|NP_111600.1| prolyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|74581167|sp|Q979Q5|SYP_THEVO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|14325343|dbj|BAB60247.1| tRNA synthetase Pro [Thermoplasma volcanium GSS1]
          Length = 462

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 72/252 (28%), Gaps = 22/252 (8%)

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
           E    E +   +     EK  +E  +I   +  +              +         ++
Sbjct: 151 EIHFFEAHTAHESYEDAEKQMDEYRIIWTEIADALCLPFLYDQRPEWDKFPGAMYTIAFD 210

Query: 309 AILGFPVMNEKQKPVVFGSVGGGG---RYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
            ++      +      +G+        +Y      F+  +    G S  +   I+ +   
Sbjct: 211 TVMPSGRSLQIGTIHQYGTNFSKNYDIKYLKEDGTFEYVHQTTFGMSERLLAAIIGIHGD 270

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM-YTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
           +        + P+ +  +    + + +Y       L   GIR  +    +   G +    
Sbjct: 271 DKGLILPPAIAPIQVVIVPIPGEGVERYAKDIETTLNGIGIRCHVDNRDNYTPGYKYNDW 330

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVST 484
           + R  PL I  G  E     + +                         + T+   +LV  
Sbjct: 331 EMRGVPLRIEVGERELKEKTVTL------------------AARNIRGKKTVQREKLVYE 372

Query: 485 VKKILQENKEEI 496
           V  +L   KE+I
Sbjct: 373 VPDMLDLVKEKI 384



 Score = 37.9 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +I   I + IRN  + + FD +  P+L     L             +
Sbjct: 27  PIKGMNVWRPYGWKIMKLIDNIIRNAVDKHSFDEVNFPVLISRGMLEVEFEHIRGFENEI 86

Query: 71  FSLQDDDG-----QWISLRY 85
           +      G     + ++LR 
Sbjct: 87  Y-WVTKGGKEKLEEELALRP 105


>gi|301312443|ref|ZP_07218359.1| glycine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300829626|gb|EFK60280.1| glycine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 514

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 32/111 (28%), Gaps = 11/111 (9%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K +    MLR    R +       + G + +  D    P  I      
Sbjct: 415 VLPLVKKDGLPEKAEEIINMLR-FDFRCQ--YDEKDSIGKRYRRQDAIGTPYCITVDHDT 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                + I+     ++    I         +     + +  L   +KK+++
Sbjct: 472 LKDNCVTIRFRDTMEQERVSIDKLHDIITEK-----VSMKNL---LKKVIE 514


>gi|291543417|emb|CBL16526.1| prolyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 485

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 30/244 (12%), Positives = 69/244 (28%), Gaps = 14/244 (5%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             E        ++   E   +  +      +S  + +        + + G V    +   
Sbjct: 162 WQEGHTIHATAQEAIEETERMLNVYADFCEHSLAMPVIKGRKTESDKFAGAVATYAIEAL 221

Query: 315 VMNEKQKPVVFGSVGGGGR-----YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS- 368
           + + K          G G       +      K  N   T + +    +   + +   + 
Sbjct: 222 MHDGKALQAGTSHYFGDGFAKAFDIEYTDKENKRVNPHQTSWGVTTRLIGAIIMTHGDNS 281

Query: 369 ----TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA 424
                  +  +  V++    H    L K     + L+  GIR ++   S  + G +    
Sbjct: 282 GLVLPPAVAPIQAVIVPIAQHKEGVLEKANQLAEALKAQGIRVKLD-DSDNSPGWKFAEY 340

Query: 425 DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ---ITIPISEL 481
           + +  P+ I  G  +  +    +     G++    +          V Q    TIP    
Sbjct: 341 EMKGVPVRIEIGPKDIEQSQCIVATRYNGEKQPVALDEAYGTLVQTVQQLLDKTIPEGMF 400

Query: 482 VSTV 485
              +
Sbjct: 401 AKAL 404


>gi|239814876|ref|YP_002943786.1| threonyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259516786|sp|C5CUU2|SYT_VARPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239801453|gb|ACS18520.1| threonyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 635

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK---NFGNQLKYADRRNCP 430
            + PV +  ++             + L+  G+R ++ L + K              +  P
Sbjct: 535 WLAPVQVAVLNISEGQADYAASVAKTLQNQGLRVQLDLHNEKITYKIRKH----SLQKLP 590

Query: 431 LAIIQGTGERSRGMLQIK 448
             ++ G  ER  G + ++
Sbjct: 591 YILVVGDKEREAGAVAVR 608



 Score = 44.4 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 37/152 (24%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   +   +R IY + G+  ++ P +    SL +           +F+ 
Sbjct: 261 GVVFWHPKGWALWQAVEQYMRGIYRDTGYWEVKGPQI-LDKSLWEKTGHWQNYRDNMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +L+             +  +       Y         +              
Sbjct: 319 TESEKREYALKPMNCPGHVLIFKSDLRSYRDLPLRYGEFGQCHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                     + ++          +     D+
Sbjct: 379 TQDDGHIFCTEDQILEECVAYTAQLQKVYADF 410


>gi|167855812|ref|ZP_02478565.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853091|gb|EDS24352.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 643

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 41/364 (11%), Positives = 96/364 (26%), Gaps = 13/364 (3%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +                D +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHIQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCMPEQVESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +    A   G +E+   +E    +   +N +        G  
Sbjct: 402 KMVYDIYSTFGFENIQVKLSTRPANSIGTDEMWNKAEADLAAALTANGLAFEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     +          +    +              V+    +  P       +G    
Sbjct: 462 YGPKIEFALRDCLDREWQCG-TIQLDFFLPERLSASYVAEDNNRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NF 417
            + + + E +      + PV    M+         Q   + L  AG+R +  L + K  F
Sbjct: 521 FIGIITEEYAGFFPAWLAPVQAVVMNITDSQAEYVQQVVKQLSDAGLRVKADLRNEKVGF 580

Query: 418 GNQ---LKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             +   L+       P  ++ G  E + G + ++        + +++      + +V   
Sbjct: 581 KVREHTLRR-----VPYMLVCGDKEIAEGKVSVRTRKGADLGTYKVEEFVEMLKKQVRGR 635

Query: 475 TIPI 478
            + +
Sbjct: 636 ELKL 639



 Score = 39.8 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 38/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 GDLMFTTQSEN-REYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +       ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCMPEQVESEVTSCIKMV 404


>gi|116328846|ref|YP_798566.1| glycyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331755|ref|YP_801473.1| glycyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280506|sp|Q04QV5|SYG_LEPBJ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|122283369|sp|Q04Z62|SYG_LEPBL RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|116121590|gb|ABJ79633.1| Glycine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125444|gb|ABJ76715.1| Glycine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 464

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 25/93 (26%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +      L K +     L   G    +    S   G + +  D    P  I    
Sbjct: 374 VAVFPLMKKDGLLEKSREIFADLSKLG---NIEYDDSGAIGKRYRRQDEIGTPFCITVDY 430

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++     +    +    +W   R
Sbjct: 431 DTLKDDTVTVRERDSMAQERVSVTRLRNWLFER 463


>gi|307611592|emb|CBX01274.1| threonyl tRNA synthetase [Legionella pneumophila 130b]
          Length = 637

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +RN   ++G+  I TP L       K           +F  
Sbjct: 261 GMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKS-GHWANFRDEMFVT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
           + ++ +  +++        +    +           
Sbjct: 320 ETEN-RHYAVKPMSCPCHVQIY-NHGLKSYRDLPLR 353



 Score = 41.4 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +          +   + L+  G+RA   L  ++  G +++    +  P  +
Sbjct: 535 WLSPVQAVVLTISEKQNEYAEKVRKTLQKRGVRANFDL-RNEKIGFKIREHTLQKIPYLL 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  E     + ++
Sbjct: 594 VVGDKEVENCQVAVR 608


>gi|150007636|ref|YP_001302379.1| prolyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|262381848|ref|ZP_06074986.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|301310397|ref|ZP_07216336.1| proline--tRNA ligase [Bacteroides sp. 20_3]
 gi|166980137|sp|A6LAP3|SYP_PARD8 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|149936060|gb|ABR42757.1| prolyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|262297025|gb|EEY84955.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|300831971|gb|EFK62602.1| proline--tRNA ligase [Bacteroides sp. 20_3]
          Length = 493

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 27/242 (11%), Positives = 62/242 (25%), Gaps = 15/242 (6%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E        +  +                     + S   R    
Sbjct: 170 EFLWQEGHTAHATREEAEIEAKKMQDVYANFA------ENYMAMPVIKGVKSESERFAGA 223

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G   G       + +    +          +RLI A
Sbjct: 224 LDTYTIEAMMQDGKALQAGTSHFLGQNFGKAFDVTFIDKNGKSDYAWATSWGVSTRLIGA 283

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +   ++ L     K       L+  GI  +    
Sbjct: 284 LIMSHSDDNGLVLPPHLAPIQVVIVPIYRSAEQLTQISEKVAGIVAKLKALGISVKYDDA 343

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +K  G +    + +  P+ +  G  +     +++      ++ +      E + +  + 
Sbjct: 344 DNKKPGWKFAEYELKGVPVRLAMGGRDLENNTIEVMRRDTLEKETITCDGIEEYVKNLLE 403

Query: 473 QI 474
           +I
Sbjct: 404 EI 405


>gi|20088996|ref|NP_615071.1| glycyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|19913849|gb|AAM03551.1| glycyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 612

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 2/89 (2%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V +  +    +     +     LR   +        S   G + +  D    P ++   
Sbjct: 505 QVAVLPLLTRKELADPAKEIIAKLREKTLLV--NYDDSGTIGRRYRRNDEIGTPYSVTVD 562

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNES 465
                 G + I+D    +++   I   E+
Sbjct: 563 YDTLQDGTVTIRDRDSMRQVRAPINGIEN 591



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 1/49 (2%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       ++ RI    R  Y    G   IE P +   +      
Sbjct: 28 RGFYDYGPLGSTLKRRIEQVWREFYVIQEGHMEIECPTIGIEEVFIASG 76


>gi|289803037|ref|ZP_06533666.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 105

 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 26/93 (27%), Gaps = 3/93 (3%)

Query: 377 PVLITTMDHDSDSL--SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
            V I  M+           +     LR  GI   M     +  G      +    P  I+
Sbjct: 8   QVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKER-PGVMFADMELIGIPHTIV 66

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
            G        ++ K    G++   +  +   + 
Sbjct: 67  IGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYL 99


>gi|325103166|ref|YP_004272820.1| prolyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324972014|gb|ADY50998.1| prolyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 490

 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 68/257 (26%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK----ISSTIVRGLEYYTGCVYEAI 310
             E        E+   E   + E+      N   +       +   R          EA+
Sbjct: 169 WQEGHTAHATREEAVEETEKMLEVYADFAENWLALPVVRGKKTANERFAGALDTYCIEAL 228

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G            S+   Q           +RL+ AL        
Sbjct: 229 MQDGKALQAGTSHFLGQNFAKAFDVKFTSKEGKQEFVWATSWGVSTRLMGALIMAHSDDA 288

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  ++   + L++           L+  GI  +     ++  G + 
Sbjct: 289 GLVLPPKLAPIQVVIVPINKGEEELARITVVADDIIAQLKAKGISVKYDDRDTQRPGFKF 348

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIPIS 479
              + +  P+ +  G  +     +++  +D    +                    T+   
Sbjct: 349 AEYEMKGVPVRLAIGGRDLDNNTIEVARRDTRTKE--------------------TMSRD 388

Query: 480 ELVSTVKKILQENKEEI 496
            +   V+ +L+E +  I
Sbjct: 389 NIADVVESLLEEIQNNI 405


>gi|295102728|emb|CBL00273.1| glycyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 473

 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 31/111 (27%), Gaps = 11/111 (9%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + P     +        K       L        +    + + G + +  D    
Sbjct: 365 HLHPALAPYKCAVLPLSKKLGDKAMEIRNELSKY---FMVDYDDTGSIGKRYRREDEIGT 421

Query: 430 PLAIIQG----TGERS----RGMLQIKDLAKGKELSREIKNNESWREARVA 472
           P  I         E         + ++D    +++   I   +S+ E+++ 
Sbjct: 422 PYCITVDFDTVGDEAKGIAADNCVTVRDRDTMEQVRMPISELKSYIESKIE 472


>gi|145595945|ref|YP_001160242.1| glycyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145305282|gb|ABP55864.1| glycyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 459

 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 25/93 (26%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  +     K +     LR      E     +   G + +  D    P  +    
Sbjct: 366 VAVLPLSRNEALSPKARKLATDLRKR-WVVEFDDSQA--IGRRYRRQDEIGTPYCVTVDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++     +    +   E +   R
Sbjct: 423 DTLDDDAVTVRNRDTMAQERISLDQVERYLIER 455


>gi|332365115|gb|EGJ42878.1| proline--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 616

 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.1 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D D+++        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEDAVALTDQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|327488783|gb|EGF20582.1| proline--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 616

 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKRIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D ++L+        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNIKDEEALALTNQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|15807053|ref|NP_295782.1| glycyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|6459849|gb|AAF11606.1|AE002042_1 glycyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 521

 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 80/268 (29%), Gaps = 24/268 (8%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               E   +    + +   +  E+I+ ++     DL       Y+L+        G  E+
Sbjct: 266 EEWHEHWLEKRLKWWEDQGVPREKIE-ILDVPKEDLAHYSKRTYDLMYDYPTL--GHEEI 322

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
             I+        +  + +    +V  +E     + +  +  P  N+   P V     G  
Sbjct: 323 EGIANRSDYDLGSHTKSQSELGLVAKVEENNDSIAKLTIPHPETNKPVVPFVIEPSAGV- 381

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLS 391
             D  +     +         G  R+++ LK              V +  +  +  +   
Sbjct: 382 --DRAMLAVLSEAFTKETLENGNERIVLKLK-------PHLAPIKVAVIPLARNREEITD 432

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ-------GT--GERSR 442
             +     L+  G+   +    S N G   +  D    P  +         G    E  +
Sbjct: 433 VAKAIKAELQGLGLG-RVLYEDSGNIGKAYRRHDEVGTPYCVTVDFDTVGLGENTDESLK 491

Query: 443 GMLQIKDLAKGKELSREIKNNESWREAR 470
             + ++D     +   +I     W +A+
Sbjct: 492 DTVTVRDRDTLAQERVKISELAGWIQAK 519


>gi|268318023|ref|YP_003291742.1| glycyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262335557|gb|ACY49354.1| glycyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 481

 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 30/107 (28%), Gaps = 3/107 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +       V +  +        + Q   + LR        F       G + +  D 
Sbjct: 371 LRLHPRLAPIKVAVLPLVRKDGMPERAQALARDLR---PFLNTFYDEKGAIGRRYRRMDE 427

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
              P  +   +     G + ++D    ++         ++ + R+ Q
Sbjct: 428 VGTPFCVTIDSQTLEDGTVTVRDRDTMQQERVHETQVLAYIKDRLRQ 474


>gi|224539709|ref|ZP_03680248.1| hypothetical protein BACCELL_04618 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518677|gb|EEF87782.1| hypothetical protein BACCELL_04618 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 520

 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 64/214 (29%), Gaps = 13/214 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V +E   K         + S   R          EA++      +       G     
Sbjct: 217 LNVYAEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 276

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 277 AFDVQFVNKENKMEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 336

Query: 387 SDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
           ++ L K           L++ GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 337 AEMLQKINEKVAGIVAKLKSMGISVKYDNADNKRPG--FKFADYELKGVPVRLVMGGRDL 394

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
               +++      ++ +      E + +  + +I
Sbjct: 395 ENNTMEVMRRDTLEKETLSCDGIEEYVKNLLEEI 428


>gi|54298706|ref|YP_125075.1| threonyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|73919801|sp|Q5X1H3|SYT_LEGPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|53752491|emb|CAH13923.1| Threonyl tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 637

 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +RN   ++G+  I TP L       K           +F  
Sbjct: 261 GMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKS-GHWANFRDEMFVT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
           + ++ +  +++        +    +           
Sbjct: 320 ETEN-RHYAVKPMSCPCHVQIY-NHGLKSYRDLPLR 353



 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +          +   + L+  GIRA   L  ++  G +++    +  P  +
Sbjct: 535 WLSPVQAVVLTISEKQNEYAEKVRKTLQKRGIRANFDL-RNEKIGFKIREHTLQKIPYLL 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  E     + ++
Sbjct: 594 VVGDKEVENCQVAVR 608


>gi|328944571|gb|EGG38732.1| proline--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 616

 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.1 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D D+++        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEDAVALTDQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|325695492|gb|EGD37392.1| proline--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 616

 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|323350534|ref|ZP_08086196.1| proline--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123216|gb|EFX94901.1| proline--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 616

 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 36.7 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D ++L+        L ++G    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSSGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|321475248|gb|EFX86211.1| hypothetical protein DAPPUDRAFT_127463 [Daphnia pulex]
          Length = 688

 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                  I N +++ +RN Y+  GF  + TP + Y+  L          ++ +FS + + 
Sbjct: 311 FTPHGAHIYNTLVEFLRNEYKQRGFQEVITPNV-YNSKLWLTSGHWQHYSENMFSFEVEK 369

Query: 78  GQWISLRYDLTAP 90
            +  +++      
Sbjct: 370 -ETYAMKPMNCPG 381



 Score = 41.7 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/115 (9%), Positives = 29/115 (25%), Gaps = 3/115 (2%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                 +     V++             Q   + +  AG R    + +      +++   
Sbjct: 575 GKWPFWLSPRQCVVVPVGPVFD---GYAQQVREQIAAAGFRITADIDAGDTMNKKIRNGQ 631

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
                  ++ G  E++ G + I+           I              T+   +
Sbjct: 632 LSQHNFILVVGEKEQTNGTVNIRTRDNKVHGEHTIAKVIERFTQLSKDKTLNSED 686


>gi|332654830|ref|ZP_08420572.1| glycine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516173|gb|EGJ45781.1| glycine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 478

 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 7/83 (8%)

Query: 397 TQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG------TGERSRGMLQIKD 449
            Q LR        +    + + G + +  D    P  I             +   + I+D
Sbjct: 395 AQKLRDELSKYFMVDYDDTGSIGKRYRRQDEIGTPYCITLDFQTVGDENTPADNCVTIRD 454

Query: 450 LAKGKELSREIKNNESWREARVA 472
               +++   +   +SW E ++A
Sbjct: 455 RDTMEQVRIPMDQVKSWLEEKLA 477


>gi|148358548|ref|YP_001249755.1| threonyl tRNA synthase [Legionella pneumophila str. Corby]
 gi|296108363|ref|YP_003620064.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|166223351|sp|A5IAK9|SYT_LEGPC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148280321|gb|ABQ54409.1| threonyl tRNA synthase [Legionella pneumophila str. Corby]
 gi|295650265|gb|ADG26112.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 637

 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +RN   ++G+  I TP L       K           +F  
Sbjct: 261 GMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKS-GHWANFRDEMFVT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
           + ++ +  +++        +    +           
Sbjct: 320 ETEN-RHYAVKPMSCPCHVQIY-NHGLKSYRDLPLR 353



 Score = 43.3 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +          +   + L+  GIRA   L  ++  G +++    +  P  +
Sbjct: 535 WLSPVQAVVLTISEKQNEYAEKVRKTLQKRGIRANFDL-RNEKIGFKIREHTLQKIPYLL 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  E     + ++
Sbjct: 594 VVGDKEVENCQVAVR 608


>gi|159039341|ref|YP_001538594.1| glycyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157918176|gb|ABV99603.1| glycyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 459

 Score = 44.4 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 9/91 (9%), Positives = 24/91 (26%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  +     K +     LR      E     +   G + +  D    P  +      
Sbjct: 368 VLPLSRNEALSPKARQLAADLRQR-WVVEFDDSQA--IGRRYRRQDEIGTPFCVTVDFDT 424

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++     +    +   E +   R
Sbjct: 425 LDDNAVTVRNRDTMAQERISLDQVERYLIER 455


>gi|332359971|gb|EGJ37785.1| proline--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 616

 Score = 44.4 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.1 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D ++L+        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEEALTLTDQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|332359309|gb|EGJ37130.1| proline--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 616

 Score = 44.4 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168


>gi|325287208|ref|YP_004262998.1| Prolyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322662|gb|ADY30127.1| Prolyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 492

 Score = 44.1 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/252 (11%), Positives = 62/252 (24%), Gaps = 20/252 (7%)

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                      A  +    + V ++             + +   R          EA++ 
Sbjct: 173 EGHTAHATENEAIAEAEQMMDVYADFAEDFMAVPVVKGLKTPSERFAGAVETYCIEALMQ 232

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLES 367
                +       G            S+   Q           +RL+ AL          
Sbjct: 233 DGKALQAGTSHFLGQNFAKAFDVKFASKEGKQEHVWATSWGVSTRLMGALIMTHSDDNGL 292

Query: 368 STNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                     V+I  +    + L     K     + LR  GI  +     +   G +   
Sbjct: 293 VLPPKLAPIQVVIVPIYKGDEQLDAISEKVNPLVKELRAKGISVKFDNRDTHKPGFKFNE 352

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  P+ I  G  +   G  ++      ++      +     E            L+ 
Sbjct: 353 YELKGVPVRIAIGKRDLENGTYEVARRDTLEKEIVNADDVIGKIEF-----------LLD 401

Query: 484 TVKKILQENKEE 495
            ++K + +   +
Sbjct: 402 DIQKNIYKKAAD 413


>gi|297626120|ref|YP_003687883.1| glycyl-tRNA synthetase (glycine--tRNA ligase) (GlyRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921885|emb|CBL56445.1| Glycyl-tRNA synthetase (Glycine--tRNA ligase) (GlyRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 462

 Score = 44.1 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 17/258 (6%), Positives = 57/258 (22%), Gaps = 25/258 (9%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +   D+   +  G  +  + +              + E  +      +      E 
Sbjct: 226 EEWHQYWIDHRKAWYVGLGIEEDNLR-------------LFEHPKEKLSHYSKRTVDIEY 272

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
                     G        +   ++    ++G            +     +   +     
Sbjct: 273 KFGFAG-SDWGELEGIANRTDFDLKTHTEHSGTDLSYFDQAQNKHYIPYVIEPAAGLTRS 331

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
               +V  +     P     +    ++          +       V +  +  +     K
Sbjct: 332 FMAFMVDAYTEDEAPNAKGGVDKRTVLKI--------DPRLAPVKVAVLPLSRNEKLSPK 383

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     LR      +     ++  G + +  D    P  +           + I++   
Sbjct: 384 ARGLADELRQY-WNVDFD--DAQAIGKRYRRQDEIGTPYCVTIDFDTLDDDAVTIRERDS 440

Query: 453 GKELSREIKNNESWREAR 470
             +    +     +  +R
Sbjct: 441 MAQERVPLSGVSEYLSSR 458


>gi|87123890|ref|ZP_01079740.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase
           [Synechococcus sp. RS9917]
 gi|86168459|gb|EAQ69716.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase
           [Synechococcus sp. RS9917]
          Length = 594

 Score = 44.1 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 23/75 (30%), Gaps = 2/75 (2%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG--V 70
            G         R+  RI   +R      G      P L+ ++   +    +        +
Sbjct: 37  SGIYAYLPLMWRVLQRINAIVREEMNALGALETLLPQLQPAELWERSGRWQGYTAGEGIM 96

Query: 71  FSLQDDDGQWISLRY 85
           F L D  G+ + L  
Sbjct: 97  FHLDDRQGRQLGLGP 111



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 3/86 (3%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V++   +    +  S  +     L   G+ A +     +  G + 
Sbjct: 484 DDAGICWPLAIAPFQVIVVVANLQEATQRSLGEDLYARLMAQGVDALLDDRQERA-GVKF 542

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI 447
           K AD    P  I+ G    + G +++
Sbjct: 543 KDADLIGIPWRIVVG-RAAADGQVEL 567


>gi|313678636|ref|YP_004056376.1| glycine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950688|gb|ADR25283.1| glycine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 458

 Score = 44.1 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 27/102 (26%), Gaps = 2/102 (1%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
             K + P     +        K +   + L    I   +    + + G + +  D    P
Sbjct: 359 MPKSVAPYKFAILPLVKKLNDKAEEIYKELLKLNIA--ITYDDAGSIGKRYRRQDSIGTP 416

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
             I       +   + I++     +    I    +  +    
Sbjct: 417 YCITVDYDSLNDECITIRNRDSMLQERISISELYNLAKNDFK 458


>gi|255066456|ref|ZP_05318311.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049336|gb|EET44800.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 310

 Score = 44.1 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 17/45 (37%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGK 58
           G      K   +   I   +R      G+  ++TP +   + LGK
Sbjct: 261 GMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKNLLGK 305


>gi|254570979|ref|XP_002492599.1| Cytoplasmic and mitochondrial glycyl-tRNA synthase [Pichia pastoris
           GS115]
 gi|238032397|emb|CAY70420.1| Cytoplasmic and mitochondrial glycyl-tRNA synthase [Pichia pastoris
           GS115]
 gi|328353394|emb|CCA39792.1| glycyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 653

 Score = 44.1 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRR 427
             I     VL+  +  +++     +  +Q+LR   I  ++   S  + G   +YA  D  
Sbjct: 531 PPIVAPTKVLLVPLQTNAEFKPIVKEISQVLRKEKIPFKVD-DSGASIGK--RYARNDEL 587

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             P  I       + G + +++     ++   + + 
Sbjct: 588 GTPFGITIDFDTIADGTVTLRERDSTTQVRGSVADI 623


>gi|256397192|ref|YP_003118756.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363418|gb|ACU76915.1| prolyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 480

 Score = 44.1 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 57/224 (25%), Gaps = 7/224 (3%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +  +  E +  T+     +  +      +          +  +  V+    
Sbjct: 156 EFLWQEGHTAHADEAEAMAETLQMLDVYEHVCRDLAAIPVVPGEKTPGERFAGAVKTFTV 215

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                    L     +         + G     D                 +    ++  
Sbjct: 216 EGMMRDGKALQSGTTHYLGTNFA-KAFGIQFADDAGRLELCHTTSWGMSTRLVGGTIMTH 274

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDS---LSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                           V+I  +     +   L+  +     L+ AGIR  +      + G
Sbjct: 275 GDDKGLVLPPKLAPYQVVIVPIARGDQAETVLAAVRELAGRLKAAGIRVHVDDRPQVSPG 334

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQI-KDLAKGKELSREIK 461
            +    + R  PL +  G  + + G   + K L  G +    I 
Sbjct: 335 FKFNDWEMRGVPLRLEIGPRDLAAGTALLAKRL--GDQGKVAIS 376


>gi|325283748|ref|YP_004256289.1| glycyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315557|gb|ADY26672.1| glycyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 506

 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 10/92 (10%)

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ-------GT--G 438
           + +   +     L+  G+   + L  S N G   +  D    P  +         G    
Sbjct: 414 ELVDLARRIKADLQKLGLG-RILLEDSGNIGKAYRRHDEVGTPYCVTVDFDTAGLGENVD 472

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              +G + +++    ++    I +  +W +A+
Sbjct: 473 AALKGTVTVRNRDTLEQERVAIADLAAWLQAK 504


>gi|295104663|emb|CBL02207.1| glycyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 473

 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 30/109 (27%), Gaps = 11/109 (10%)

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
              + P     +        K       L        +    + + G + +  D    P 
Sbjct: 367 HPALAPYKCAVLPLSKKLGEKAMEIRNELSKY---FMVDYDDTGSIGKRYRREDEIGTPF 423

Query: 432 AIIQG----TGERS----RGMLQIKDLAKGKELSREIKNNESWREARVA 472
            I         E         + ++D    +++   I   +S+ E+++ 
Sbjct: 424 CITVDFDTVGDEAKGIAADNCVTVRDRDTMEQVRMPISELKSYIESKIE 472


>gi|170726837|ref|YP_001760863.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688661|sp|B1KG61|SYT_SHEWM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|169812184|gb|ACA86768.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 642

 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 16/199 (8%), Positives = 56/199 (28%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+  + + +  +++        +   +   +                 +       
Sbjct: 314 SEAMFT-TNSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   ++  +                      I+ K+    
Sbjct: 373 LMRVRGFTQDDAHVFCTEDQVQQEVSACI--------KMVYDTYETFGFKDIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++ +  +  RA + L +
Sbjct: 425 EKRIGDDDMWDRAEEALKQ 443



 Score = 44.1 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 7/126 (5%)

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I+  +        +  M  V++   D  SD + +      +L+  GIRA   L  ++  G
Sbjct: 524 ILIEEYAGKFPTWLAPMQAVVMNITDKQSDYVDE---VVNILKENGIRASKDL-RNEKIG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E     + ++       +         +      QI++  
Sbjct: 580 FKIREHTLRRVPYLLVVGDQEMENKEVAVR---TRDGVDLGKIQISEFASKIKEQISLRS 636

Query: 479 SELVST 484
             L+  
Sbjct: 637 LNLLEE 642


>gi|109898814|ref|YP_662069.1| threonyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109701095|gb|ABG41015.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
           [Pseudoalteromonas atlantica T6c]
          Length = 638

 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+   +     Q   + L+  GIRA+  L  ++  G +++    R  P  ++ G  E 
Sbjct: 543 VVMNITDNQSEYAQKVVKKLKEIGIRAKSDL-RNEKIGFKIREHTLRRVPYLLVVGDKEI 601

Query: 441 SRGMLQIKDLA 451
             G + ++   
Sbjct: 602 EAGEIAVRSRK 612



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 30/107 (28%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   +   +R+    Y +D ++ PL+       K     D+  + +F+ 
Sbjct: 262 GMVFWHNDGWSIYTELEKFVRSKLREYEYDEVKAPLMMDRSLWEKS-GHWDKYAENMFT- 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              + +  +++        +   +   +                 + 
Sbjct: 320 TTSEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEP 366


>gi|148655020|ref|YP_001275225.1| glycyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148567130|gb|ABQ89275.1| glycyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 530

 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 29/107 (27%), Gaps = 6/107 (5%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA---GIRAEMFLGSSKNFGNQLKY 423
                      V +  +  + + L       + LRTA   G         +   G   + 
Sbjct: 426 LHLKPHLAPIRVAVFPLKRNHEGL---VAMARELRTAIQSGSSFRTVYDDTGAIGKLYRR 482

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            D    P  +         G + ++D    +++        ++   R
Sbjct: 483 QDEIGTPYCVTVDFQSLEDGTVTVRDRDTMQQVRIPASEVRAYVTGR 529


>gi|240170657|ref|ZP_04749316.1| threonyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 697

 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 40/114 (35%), Gaps = 9/114 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +    + +   +     L++ G+R E+  GS      ++ +   +  P  +
Sbjct: 582 WLAPVQVVGIPVADEHVPYLEEVAAQLKSYGVRVEVD-GSDDRMAKKIVHHTNQKVPFML 640

Query: 434 IQGTGERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQITIPISELV 482
           + G  +   G +  +      +         +     W   R  + T P + LV
Sbjct: 641 LAGDRDVQAGAVSFR-FGDRTQLNGVPRDAAVAAIVEWLATR--ENTAPTAGLV 691


>gi|74501411|sp|Q6WRH6|PYLS_METBA RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|33466218|gb|AAQ19545.1| PylS [Methanosarcina barkeri]
          Length = 419

 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 58/147 (39%), Gaps = 21/147 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRN----------------RILDSIRNIYENYGFDPIET 47
           + K+   + + F +   + +  R                 ++   I   + + GF  I++
Sbjct: 170 EDKISLNMAKPFRELEPELVTRRKNDFQRLYTNDREDYLGKLERDITKFFVDRGFLEIKS 229

Query: 48  PLLEYSDSLGKFLPDED-RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC 106
           P+L  ++ + +   + D   +K +F + D +   + LR  L   L  Y+ +    +  P 
Sbjct: 230 PILIPAEYVERMGINNDTELSKQIFRV-DKN---LCLRPMLAPTLYNYLRKLDRILPGPI 285

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + + +GP +R E  G     +F   + 
Sbjct: 286 KIFEVGPCYRKESDGKEHLEEFTMVNF 312


>gi|73919802|sp|Q5ZS05|SYT_LEGPH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
          Length = 637

 Score = 44.1 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +RN   ++G+  I TP L       K           +F  
Sbjct: 261 GMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKS-GHWANFRDEMFVT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
           + ++ +  +++        +    +           
Sbjct: 320 ETEN-RHYAVKPMSCPCHVQIY-NHGLKSYRDLPLR 353



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +          +   + L+  GIRA   L  ++  G +++    +  P  +
Sbjct: 535 WLSPVQAIVLTISEKQNEYAEKVRKTLQKRGIRANFDL-RNEKIGFKIREHTLQKIPYLL 593

Query: 434 IQGTGERSRGMLQIK 448
           + G  E     + ++
Sbjct: 594 VVGDKEVENCQVAVR 608


>gi|328773873|gb|EGF83910.1| hypothetical protein BATDEDRAFT_18299 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 706

 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G A       RI N ++D  R+ Y   GF  + TP +  +    +        ++ +F+L
Sbjct: 322 GSAFFLPHGTRIYNTLIDLQRSEYRKRGFHEVVTPNMYNTKLWERS-GHWANYHEDMFAL 380

Query: 74  QDDDGQWISLRYDLTAP 90
            D + +  +L+      
Sbjct: 381 -DVEKEKFALKPMNCPG 396



 Score = 41.4 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 32/330 (9%), Positives = 92/330 (27%), Gaps = 10/330 (3%)

Query: 128 FIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD 187
           F +    N+ ++     +       + + A+ +++  + +   N      I +       
Sbjct: 350 FHEVVTPNMYNTKLWERSGHWANYHEDMFALDVEKEKFALKPMNCPGHCLIFKNRDRSYR 409

Query: 188 DKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
           +                   L G+  +    + D         +    +++  + FL   
Sbjct: 410 ELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAH--IFCRLDQIGTEMEGCLDFLKHI 467

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
              S+      +K +   E    E+    +  +      N+   + ++  G   + G   
Sbjct: 468 Y--SIFGFTFELKLSTRPENFLGEIATWDQAEKLLEEALNKFGSTWSLNEGDGAFYGPKI 525

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIG-----ISRLIVAL 362
           + ++   +    Q   +        R++         N  +    I          ++A+
Sbjct: 526 DIVISDALRRRHQCATIQLDFQLPDRFELEYRTDDPANQFSRPVMIHRAILGSVERMIAI 585

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
            +   +      + P  +  +                L  AG+ AE  + S      +++
Sbjct: 586 LTENFAGKWPFWLSPRQVIVVPIAVPFNEYATKVANQLYAAGLYAEADV-SDLTLKKKIR 644

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            A+        + G  E     +  ++   
Sbjct: 645 NAEIAQWNFIFVVGEEEEKSDSVNCRNRDD 674


>gi|291235359|ref|XP_002737612.1| PREDICTED: AGAP008929-PA-like, partial [Saccoglossus kowalevskii]
          Length = 314

 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 47/149 (31%), Gaps = 7/149 (4%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I N +++ I++ Y   GF  + +P + Y+  L +         + +FS +  +
Sbjct: 66  FHPKGAHIYNTLINYIKSEYRTRGFQEVVSPNI-YNSKLWETSGHWQHYAENMFSFE-SE 123

Query: 78  GQWISLRYDLTAP---LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
            +  +L+          A+Y     D +      Y        +               +
Sbjct: 124 KEKFALKPMNCPGHWNTAKYAC--RDQVQRRPTAYMWLERMIQQMVAQEIPSYQTLFVFE 181

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRN 163
              +   T  + +   +   L  +G+   
Sbjct: 182 MSEAKYTTQVSLIMAAIQIILLTLGLING 210


>gi|241895744|ref|ZP_04783040.1| prolyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870787|gb|EER74538.1| prolyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 570

 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ N+I   IR   E      +  P+L  ++ L +     +     +F L
Sbjct: 38  GVYAYLPLAQRVLNKINAIIREEMEKIDAIEMTAPVLLPAE-LWEESGRYETYGPNLFKL 96

Query: 74  QDDDGQWISLRY 85
           ++  G+ + L  
Sbjct: 97  KNRHGRDMILGP 108


>gi|255038651|ref|YP_003089272.1| glycyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254951407|gb|ACT96107.1| glycyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 494

 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 10/106 (9%), Positives = 28/106 (26%), Gaps = 8/106 (7%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K Q     L+++          +   G +    D    P  I+     
Sbjct: 397 VLPLVKKDGLAEKAQALANSLKSSFRTV---YDDNAAIGKRYTRQDLIGTPYCIVVDYQT 453

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                + I+     ++    I   +     +     + I  ++  +
Sbjct: 454 MEDDTVTIRHRDTMEQERVHISELKEKIGYQ-----VAIERILEAI 494


>gi|269114991|ref|YP_003302754.1| glycyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322616|emb|CAX37351.1| Glycyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 458

 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM--FLGSSKNFGNQLKYADRRNCPL 431
            + P  +          SK +     L     + E+      S + G + +  D    P 
Sbjct: 361 NIAPYQVAIFPLMKKLNSKAKEIFDNLLQ---KTELRLIYDESGSIGKRYRRQDAIGTPF 417

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
           A+        +  + +++    K+   E+ N   + E 
Sbjct: 418 AVTIDFDTLEKNTVTVRERDSMKQHVVELDNLIKFFEN 455


>gi|238504368|ref|XP_002383415.1| prolyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220690886|gb|EED47235.1| prolyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 514

 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI--KDL 450
                L +AGIR ++      + G +         PL I+ G  E +  ++ I  +DL
Sbjct: 306 RLVSRLSSAGIRVKVDDLEGYSLGWRFNEWIVSGTPLFIVLGPNEVTNQVVTIGRRDL 363


>gi|156120825|ref|NP_001095559.1| probable threonyl-tRNA synthetase 2, cytoplasmic [Bos taurus]
 gi|189083595|sp|A6QNM8|SYTC2_BOVIN RecName: Full=Probable threonyl-tRNA synthetase 2, cytoplasmic;
           AltName: Full=Threonine--tRNA ligase; Short=ThrRS;
           AltName: Full=Threonyl-tRNA synthetase-like protein 2
 gi|151556799|gb|AAI48907.1| TARSL2 protein [Bos taurus]
 gi|296475416|gb|DAA17531.1| threonyl-tRNA synthetase-like 2 [Bos taurus]
          Length = 724

 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 39/141 (27%), Gaps = 2/141 (1%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              +   I N ++D IR  +    F  + +P + YS  L +        ++ +F+  D D
Sbjct: 422 FLPRGACIYNTLIDFIREQHHQRNFTEVLSPNM-YSCKLWEASGHWQHYSENMFTF-DID 479

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
               +L+           A    +            V    +                  
Sbjct: 480 KDTFALKPMNCPGHCLMFAHRPRSWREMPIRLADFGVLHRNEPSGALSGLTCVRRFQQDD 539

Query: 138 SSAETADAEMCMMMADTLEAV 158
           +       ++   +   L+ +
Sbjct: 540 AHIFCTVGQLEEEIKGCLQFL 560


>gi|311747151|ref|ZP_07720936.1| threonine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126578860|gb|EAZ83024.1| threonine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 649

 Score = 44.1 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 37/111 (33%), Gaps = 3/111 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F      + V ++    +         + I  +      +   +   
Sbjct: 512 NQKHRPVMIHRAPFGSLERFVAVLIEHCAGNFPLWLSPEQINILPIS--EKFVDYAEEIK 569

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +L  AGI   +     +  G +++ ++ +  P  +I G  E+    L ++
Sbjct: 570 GILDEAGISGSID-NRDEKIGRKIRDSEVKKVPFMLIVGEKEKEERKLSVR 619



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 32/115 (27%), Gaps = 4/115 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +R R+++ ++   +  G+  + TP + +   L +     ++  K  F  
Sbjct: 265 GLPLWLPKGTLLRERLVNFLKKAQDKAGYQQVITPHIGHK-VLYETSGHYEKYGKDSFQP 323

Query: 74  QD--DDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
                +G+   L+            ++                        G   
Sbjct: 324 ITTPHEGEEFLLKPMNCPHHCEIY-KHKPHSYKELPIRYAEFGTVYRYEQSGELH 377


>gi|320590421|gb|EFX02864.1| glycyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 665

 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 1/89 (1%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAII 434
              VLI  +    +     +  +Q LR+ G+ + +   S+ + G +    D    P  I 
Sbjct: 544 PTKVLIVPISSKDEFKPVVRDLSQKLRSLGLASRVD-DSTASIGKRYSRNDELGTPFGIT 602

Query: 435 QGTGERSRGMLQIKDLAKGKELSREIKNN 463
                   G + +++    +++  +    
Sbjct: 603 IDFQTIKDGSVTLRERDSTRQVRADEATI 631


>gi|309807201|ref|ZP_07701175.1| proline--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166422|gb|EFO68627.1| proline--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 472

 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +    I    EN     +  P    + +L +      +    +F L
Sbjct: 38  GVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 97  KDRHGRESLLGP 108


>gi|289168683|ref|YP_003446952.1| prolyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288908250|emb|CBJ23092.1| prolyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 617

 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.9 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +     N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLE 612


>gi|219871154|ref|YP_002475529.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254783524|sp|B8F5H9|SYT_HAEPS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219691358|gb|ACL32581.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 643

 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 40/360 (11%), Positives = 97/360 (26%), Gaps = 5/360 (1%)

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
              +   + +     +                D +     +  +Y I   N      I  
Sbjct: 283 TKLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHIQIFN 342

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
           +      D                   L G+ + +     D++  F     + SE    +
Sbjct: 343 QGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCMPEQVESEVTSCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I        +   +    A   G +E+   +E    +   +N +        G  
Sbjct: 402 KMVYDIYSTFGFENIQVKLSTRPANSIGTDEMWNKAEADLAAALTANGLAFEIQEGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRL 358
           Y     +          +    +              V+    +  P       +G    
Sbjct: 462 YGPKIEFALRDCLDREWQCG-TIQLDFFLPERLSASYVAEDNDRKTPVMIHRAILGSIER 520

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            + + + E +      + PV    M+         Q   + L  AG+R +  L  ++  G
Sbjct: 521 FIGIITEEYAGFFPAWLAPVQAVVMNITDSQAEYVQQVVKQLSDAGLRVKADL-RNEKVG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +++    R  P  ++ G  E + G + ++        + +++      + +V    + +
Sbjct: 580 FKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRKGADLGTYKVEEFVEMLKKQVRGRELKL 639



 Score = 39.8 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 38/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 GDLMFTTQSEN-REYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +       ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCMPEQVESEVTSCIKMV 404


>gi|322382352|ref|ZP_08056259.1| prolyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153705|gb|EFX46080.1| prolyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 481

 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 57/197 (28%), Gaps = 27/197 (13%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL----- 362
           EA++      +       G+          ++R        T      +RLI A+     
Sbjct: 219 EAMMKDGKAVQAGTSHYLGTNFAEAFDIKFLNRENQHEFVHTTSWGVSTRLIGAMIMAHG 278

Query: 363 KSLESSTNNIKEMGPVLITTMDHD---SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
                          V++  +         L+K       ++ AG R  +     ++ G 
Sbjct: 279 DDRGLVMPPKVAPTQVIMIPIGPAKTRDQVLAKTYELQTEIKKAGFRVRVDARE-QSPGW 337

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +    + R  P+ +  G  +   G + +     G++                    +   
Sbjct: 338 KFNEYEMRGVPVRVELGPRDMENGQVILVSRVTGEKKV------------------VAQD 379

Query: 480 ELVSTVKKILQENKEEI 496
            LV  + ++L E   ++
Sbjct: 380 NLVEEITRLLDEAHNQM 396


>gi|309805512|ref|ZP_07699557.1| proline--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165163|gb|EFO67401.1| proline--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 472

 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +    I    EN     +  P    + +L +      +    +F L
Sbjct: 38  GVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 97  KDRHGRESLLGP 108


>gi|242033449|ref|XP_002464119.1| hypothetical protein SORBIDRAFT_01g012680 [Sorghum bicolor]
 gi|241917973|gb|EER91117.1| hypothetical protein SORBIDRAFT_01g012680 [Sorghum bicolor]
          Length = 739

 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 33/111 (29%), Gaps = 8/111 (7%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                        + L+               ++ ++     S+   +     L  AG  
Sbjct: 614 HRAILGSVERMFAILLEHYNGKWPLWLSPRQAIVCSVSSG--SVEYAKQVLATLHEAGFH 671

Query: 407 AEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK-----DLAK 452
           A++   S +    +++ A        ++ G  E   G + ++     DLA 
Sbjct: 672 ADID-ASDRTIQKKVREAQLAQFNYILVVGAQEAETGNICVRVRDNADLAT 721



 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N+++D +R  Y   G+  + +P + Y+  L +         + +F  + + 
Sbjct: 369 FLPHGARIYNKLMDFMRQQYRARGYQEVLSPNM-YNMQLWETSGHAANYKENMFVFEIEK 427

Query: 78  GQWISLRYDLTAPLARYVAEN 98
            Q   L+           A  
Sbjct: 428 -QEFGLKPMNCPGHCLMFANR 447


>gi|225852573|ref|YP_002732806.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256263936|ref|ZP_05466468.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|254783511|sp|C0RJ44|SYT_BRUMB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|225640938|gb|ACO00852.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263094080|gb|EEZ18002.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
          Length = 658

 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 62/193 (32%), Gaps = 18/193 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   ++  +R   +++G+  + TP +    SL +           +F +
Sbjct: 265 GVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQV-LDKSLWETSGHWGWYRDNMFKV 323

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGRFR 126
                  DD +  +L+        +   ++        P +    G V R E  G     
Sbjct: 324 TVAGDDTDDDRVFALKPMNCPGHVQIF-KHGLKSYRDLPIKLAEFGNVHRYEPSGALH-- 380

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                    +     T D        + + A  ++ ND+ + +      + I  K+    
Sbjct: 381 -------GLMRVRGFTQDDAHIFCTEEQMAAECLQINDHILSVYKDFGFEEITIKLSTRP 433

Query: 187 DDKLNERLIVLRA 199
           + ++    +  RA
Sbjct: 434 EKRVGSDELWDRA 446



 Score = 40.2 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV-----I 275
           D++  F     + +E + I    LS+  +    E+   +        G +EL       +
Sbjct: 391 DDAHIFCTEEQMAAECLQINDHILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVM 450

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             ++ +    SN IK       G  Y     +E  L   +  E Q            R+ 
Sbjct: 451 MTVLEQIRQQSNNIKTGILPGEGAFYG--PKFEYTLKDAIGREWQCGTTQVDFNLPERFG 508

Query: 336 GLV-----SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                    + +   +           L + +++             V++ T+  D+D  
Sbjct: 509 AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATITSDADEY 568

Query: 391 SK---------YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +K                LR   I    +     +             P+ ++ G  E  
Sbjct: 569 AKEAAAKLKAAGLQVVTDLRNEKIN---YKVREHSLQK---------VPVILVCGKREAE 616

Query: 442 RGMLQIKDLAKGKELSREIKN 462
              + ++ L    + S  +  
Sbjct: 617 EKTVNMRRLGSRDQESMTLDE 637


>gi|213966110|ref|ZP_03394297.1| threonyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951208|gb|EEB62603.1| threonyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 686

 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 7/101 (6%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  +    D +   + +   L++ GIR  +     +    +++   +   P  I+ G  
Sbjct: 579 QVVGIPVADDCIPHLEDFAAQLKSRGIRVHVDTSDDR-MQKKIRNHTQAKVPFMILAGAR 637

Query: 439 ERSRGMLQIKDLAKGKE-----LSREIKNNESWREARVAQI 474
           +   G +  + L  G +     + + +     W  +R  + 
Sbjct: 638 DIEAGAVSFRFL-DGTQINGVAVEKAVDIICDWVASRNNEQ 677


>gi|11387153|sp|Q9RSR5|SYG_DEIRA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
          Length = 506

 Score = 44.1 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 80/268 (29%), Gaps = 24/268 (8%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               E   +    + +   +  E+I+ ++     DL       Y+L+        G  E+
Sbjct: 251 EEWHEHWLEKRLKWWEDQGVPREKIE-ILDVPKEDLAHYSKRTYDLMYDYPTL--GHEEI 307

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
             I+        +  + +    +V  +E     + +  +  P  N+   P V     G  
Sbjct: 308 EGIANRSDYDLGSHTKSQSELGLVAKVEENNDSIAKLTIPHPETNKPVVPFVIEPSAGV- 366

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD-SDSLS 391
             D  +     +         G  R+++ LK              V +  +  +  +   
Sbjct: 367 --DRAMLAVLSEAFTKETLENGNERIVLKLK-------PHLAPIKVAVIPLARNREEITD 417

Query: 392 KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ-------GT--GERSR 442
             +     L+  G+   +    S N G   +  D    P  +         G    E  +
Sbjct: 418 VAKAIKAELQGLGLG-RVLYEDSGNIGKAYRRHDEVGTPYCVTVDFDTVGLGENTDESLK 476

Query: 443 GMLQIKDLAKGKELSREIKNNESWREAR 470
             + ++D     +   +I     W +A+
Sbjct: 477 DTVTVRDRDTLAQERVKISELAGWIQAK 504


>gi|326409092|gb|ADZ66157.1| threonyl-tRNA synthetase [Brucella melitensis M28]
          Length = 660

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 62/193 (32%), Gaps = 18/193 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   ++  +R   +++G+  + TP +    SL +           +F +
Sbjct: 267 GVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQV-LDKSLWETSGHWGWYRDNMFKV 325

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGRFR 126
                  DD +  +L+        +   ++        P +    G V R E  G     
Sbjct: 326 TVAGDDTDDDRVFALKPMNCPGHVQIF-KHGLKSYRDLPIKLAEFGNVHRYEPSGALH-- 382

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                    +     T D        + + A  ++ ND+ + +      + I  K+    
Sbjct: 383 -------GLMRVRGFTQDDAHIFCTEEQMAAECLQINDHILSVYKDFGFEEITIKLSTRP 435

Query: 187 DDKLNERLIVLRA 199
           + ++    +  RA
Sbjct: 436 EKRVGSDELWDRA 448



 Score = 40.2 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV-----I 275
           D++  F     + +E + I    LS+  +    E+   +        G +EL       +
Sbjct: 393 DDAHIFCTEEQMAAECLQINDHILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVM 452

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             ++ +    SN IK       G  Y     +E  L   +  E Q            R+ 
Sbjct: 453 MTVLEQIRQQSNNIKTGILPGEGAFYG--PKFEYTLKDAIGREWQCGTTQVDFNLPERFG 510

Query: 336 GLV-----SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                    + +   +           L + +++             V++ T+  D+D  
Sbjct: 511 AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATITSDADEY 570

Query: 391 SK---------YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +K                LR   I    +     +             P+ ++ G  E  
Sbjct: 571 AKEAAAKLKAAGLQVVTDLRNEKIN---YKVREHSLQK---------VPVILVCGKREAE 618

Query: 442 RGMLQIKDLAKGKELSREIKN 462
              + ++ L    + S  +  
Sbjct: 619 EKTVNMRRLGSRDQESMTLDE 639


>gi|225573951|ref|ZP_03782596.1| hypothetical protein RUMHYD_02045 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038789|gb|EEG49035.1| hypothetical protein RUMHYD_02045 [Blautia hydrogenotrophica DSM
           10507]
          Length = 479

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 4/140 (2%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMD---HDSDS 389
           +Y    +  K  +  + G +  +   I+ +    S       + PV    +         
Sbjct: 247 QYADRDNTLKYVHQTSWGMTTRMIGAIIMVHGDNSGLVLPPRIAPVQAMIIPIQQKKEGV 306

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
           L K       ++ AGIR ++   S K+ G +    + R  P+ I  G  +   G   I  
Sbjct: 307 LEKADEMMAAIKKAGIRVKVD-DSDKSPGWKFSEQEMRGIPVRIECGPKDIENGQAVIVR 365

Query: 450 LAKGKELSREIKNNESWREA 469
               +++    ++     + 
Sbjct: 366 RDTREKIVVSFEDLAQKVQE 385


>gi|220673116|emb|CAX14534.1| novel protein similar to vertebrate threonyl-tRNA synthetase (Tars)
           [Danio rerio]
          Length = 145

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 32/92 (34%)

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
             ++A+ +   +      + P  +  +  +       +   +    AG  A+  L SS  
Sbjct: 20  ERMIAILTENYAGKWPLWLSPRQVMLVPVNPSLEEYAKQVCKRFVEAGFMADADLDSSCL 79

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              +++ A        ++ G  ER    + ++
Sbjct: 80  LNKKIRNAQLAQYNFILVVGEKERLSNSVNVR 111


>gi|161507687|ref|YP_001577641.1| prolyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048310|sp|A8YVR3|SYP_LACH4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|160348676|gb|ABX27350.1| Prolyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 565

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    I +  E      +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAEGIIEDEMEKINVPEMIMPHLLPA-TLWQESGRYKKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           +D  G+   L    + T      +A+N  +             
Sbjct: 97  KDRHGRESLLGPTHEET--FTEIIAKNLKSYKQMPLALYQIQT 137


>gi|170578851|ref|XP_001894567.1| Bifunctional aminoacyl-tRNA synthetase  [Brugia malayi]
 gi|158598757|gb|EDP36588.1| Bifunctional aminoacyl-tRNA synthetase , putative [Brugia malayi]
          Length = 544

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 42/102 (41%), Gaps = 7/102 (6%)

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ- 446
             + K +    +L   GIR E+ +  + + G +  + + +  P+ I  G  + +   +  
Sbjct: 356 ALIEKAKEVNNILLDVGIRTELDVRDNISPGWKFNHWELKGVPVRIEIGPKDLANSQITC 415

Query: 447 -IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
            I+    G++    I    +  +  + +I    + ++  V++
Sbjct: 416 VIRY--SGEKRIIPIDVLATKCKDMLDEIH---NSIILEVRE 452


>gi|157962084|ref|YP_001502118.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083623|sp|A8H4U6|SYT_SHEPA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|157847084|gb|ABV87583.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 642

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 4/110 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M+              + +  GIRA   L  ++  G +++    R  P  +
Sbjct: 536 WLSPVQVVVMNITDKQSDYVDEVVNLFKEHGIRATKDL-RNEKIGFKIREHTLRRVPYLL 594

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
           + G  E     + ++     + +       E +      QI++    L+ 
Sbjct: 595 VVGDQEMENKEVAVR---TREGVDLGKMQIEEFATKLKNQISLRSLNLLE 641



 Score = 43.3 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 16/199 (8%), Positives = 56/199 (28%), Gaps = 11/199 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWSLFLELEKFIRQKLGQYTYQEVKGPLMMDR-VLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +F+    + +  +++        +   +   +                 +       
Sbjct: 314 SEAMFT-TSSENREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   ++  +                    + I+ K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQVQQEVSACI--------KMVYDTYETFGFNSIVVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDK 205
           + ++ +  +  RA + L +
Sbjct: 425 EKRIGDDEMWDRAEEALKQ 443


>gi|70729481|ref|YP_259219.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|68343780|gb|AAY91386.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 640

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 35/142 (24%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +  + G+  I+TP +       K         + +F+ 
Sbjct: 261 GMVFWHPNGWTLYQVLEQYMRKVQRDNGYLEIKTPQVVDRSLWEKS-GHWANYAENMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/231 (9%), Positives = 63/231 (27%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   + +  +    ++   +        G ++L   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTMDVYADFGFKDIEMKLSTRPEKRVGSDDLWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            +  +S  +        G  Y     +        + +              G       
Sbjct: 441 AAALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLGAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKHPVMLHRAILGSFERFVGILIEHYEGAFPAWLAPTQA--VVMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLNQSGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|329963564|ref|ZP_08301043.1| proline--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328528553|gb|EGF55524.1| proline--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 497

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 66/214 (30%), Gaps = 13/214 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  E   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYGEFAEKYMAVPVVKGVKSANERFAGALNTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQLKYADR--RNCPLAIIQGTGER 440
           ++ L+K           L++ GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 AEMLAKIDEKVAGIVAKLKSMGISVKYDNADNKRPG--FKFADYEVKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
               ++I      ++ +R  +  E + +  + +I
Sbjct: 372 ENNTMEIMRRDTLEKETRSCEGIEEYVKDLLEEI 405


>gi|324992477|gb|EGC24398.1| proline--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995993|gb|EGC27904.1| proline--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327460709|gb|EGF07044.1| proline--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327472430|gb|EGF17861.1| proline--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 616

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D ++L+        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNIKDEEALALTNQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|309808806|ref|ZP_07702691.1| proline--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308167932|gb|EFO70065.1| proline--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 472

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +    I    EN     +  P    + +L +      +    +F L
Sbjct: 38  GVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 97  KDRHGRESLLGP 108


>gi|256822932|ref|YP_003146895.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796471|gb|ACV27127.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 639

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 39/352 (11%), Positives = 92/352 (26%), Gaps = 8/352 (2%)

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
             + +     +   +    +       D +  +     DY I   N      I       
Sbjct: 287 HDYQEVKTPQMVDRSLWEKSGHWDKFGDDMFTLKSDERDYAIKPMNCPCHVQIFNVGLKS 346

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
             D                   L G+ + L     D++  F     +  E    +     
Sbjct: 347 YRDLPLRMAEFGSCHRNEPSGALHGI-MRLRNFVQDDAHIFCTEDQIQEEVSKFIAMLYD 405

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
           +  +    ++   +        G ++    +E        +N I+       G  Y    
Sbjct: 406 VYADFGFTDVIVKLSTRPEQRVGTDQEWDKAEAALADALKANSIQFEYQPGEGAFYGPKL 465

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALK 363
            +  +      + +   +       G      V+    +  P       +G     + + 
Sbjct: 466 EF-TLKDCLERHWQCGTIQVDFSMPGRLDAEYVAESGERETPVMLHRAILGSLERFIGIL 524

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
             E +      + P     M+         Q   + L+  G R    L  ++  G +++ 
Sbjct: 525 IEEFAGKFPAWLAPTQAVVMNITDKQADFCQKVVESLKNKGFRVNSDL-RNEKIGFKIRE 583

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
                 P  ++ G  E     + ++             + E++ E   A++T
Sbjct: 584 QTLARVPFLLVVGDREVENNHVAVR---TRDGEDLGSMSIEAFAELLEAEVT 632



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 2/76 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   IR   + + +  ++TP +       K     D+    +F+L
Sbjct: 261 GMIFWHDKGWTIYKTLEQYIRERLKEHDYQEVKTPQMVDRSLWEKS-GHWDKFGDDMFTL 319

Query: 74  QDDDGQWISLRYDLTA 89
           +  D +  +++     
Sbjct: 320 K-SDERDYAIKPMNCP 334


>gi|218131142|ref|ZP_03459946.1| hypothetical protein BACEGG_02747 [Bacteroides eggerthii DSM 20697]
 gi|317476982|ref|ZP_07936224.1| prolyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217986662|gb|EEC52996.1| hypothetical protein BACEGG_02747 [Bacteroides eggerthii DSM 20697]
 gi|316906775|gb|EFV28487.1| prolyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 497

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 70/235 (29%), Gaps = 24/235 (10%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  E   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYGEFAEKYMAVPVVKGVKSANERFAGALNTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQLKYADR--RNCPLAIIQGTGER 440
           ++ L+K           L++ GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 AEMLAKIDEKVAGIVAKLKSMGISVKYDNADNKRPG--FKFADYEVKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
               +++      ++ +R     E + +           +L+  ++  + +   +
Sbjct: 372 ENNTMEVMRRDTLEKETRSCDGIEEYVK-----------DLLEEIQANIYKKALD 415


>gi|33519811|ref|NP_878643.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|33504156|emb|CAD83418.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 410

 Score = 44.1 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 59/219 (26%), Gaps = 26/219 (11%)

Query: 1   MGKKTKLR--------AEL--------PRGFADCPTKEIRIRNRILDSIRNIYENYGFDP 44
           M K  K++         +L          G          I   + + IR   + Y +  
Sbjct: 1   MKKNQKIKKYDHRNLSHQLDLYHLQEDAPGMVFWHVNGWTIFQELKNFIRKKLQQYQYQE 60

Query: 45  IETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF 104
           +++P +     L K     D   + +F+  D + +   ++             +      
Sbjct: 61  VKSPTMIDR-VLWKKTGHWDNYYEHIFT-TDSENRKYCIKPMNCPG-------HIQIFNH 111

Query: 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRND 164
             +TY+  P+   E  G     +        +     T D          +         
Sbjct: 112 GLKTYKDLPIRMAEF-GSCHRNELSGSLHGLMRIREFTQDDAHIFCALTQIPNELYHCIK 170

Query: 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKL 203
               I +      I+ K+      ++ E  +   A   L
Sbjct: 171 MMYDIYHVFNFKKIIVKLSTRPKKRIGEDSVWDVAEQYL 209



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/350 (10%), Positives = 92/350 (26%), Gaps = 11/350 (3%)

Query: 104 FPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
           +    + I    +N      +  Q+ +     +                + +     +  
Sbjct: 34  WHVNGWTIFQELKNFIRKKLQQYQYQEVKSPTMIDRVLWKKTGHWDNYYEHIFTTDSENR 93

Query: 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNS 223
            Y I   N      I         D                   L G+ + + E   D++
Sbjct: 94  KYCIKPMNCPGHIQIFNHGLKTYKDLPIRMAEFGSCHRNELSGSLHGL-MRIREFTQDDA 152

Query: 224 GDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSG 283
             F     + +E    +     I    +  ++   +        G + +  ++E      
Sbjct: 153 HIFCALTQIPNELYHCIKMMYDIYHVFNFKKIIVKLSTRPKKRIGEDSVWDVAEQYLSDV 212

Query: 284 YNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG 343
              N I+ +     G  Y     +  +L     + +   +              +     
Sbjct: 213 LKQNNIEFTYQPNDGAFYGPKIEF-ILLDSLKRSWQCGTIQLDFTLPKLLESKYIDNNNS 271

Query: 344 QNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
              P       +G     + + + E        + P+ I  M+     +S      + L 
Sbjct: 272 YQTPVIIHRAVLGSIERFIGVITEEYLGFFPTWLAPIQIIIMNVTDGQISYVIELAKKLS 331

Query: 402 TAGIRAEMFLGS---SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               R ++ L +   S    + + +      P  +I G  E ++  + I+
Sbjct: 332 NKNFRVKIDLRNETISFKIRSHIIH----RIPYMLICGNAEMNQKTVSIR 377


>gi|332306910|ref|YP_004434761.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174239|gb|AEE23493.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 638

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+   +     Q   + L+  GIRA+  L  ++  G +++    R  P  ++ G  E 
Sbjct: 543 VVMNITDNQSEYAQKVVKKLKEIGIRAKSDL-RNEKIGFKIREHTLRRVPYLLVVGDKEI 601

Query: 441 SRGMLQIKDLA 451
             G + ++   
Sbjct: 602 EAGEIAVRSRK 612



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/107 (8%), Positives = 29/107 (27%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   +   +R+    Y +  ++ PL+       K     D+  + +F+ 
Sbjct: 262 GMVFWHNDGWSIYTELEKFVRSKLREYEYQEVKAPLMMDRSLWEKS-GHWDKYAENMFT- 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              + +  +++        +   +   +                 + 
Sbjct: 320 TTSEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEP 366


>gi|330469568|ref|YP_004407311.1| glycyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812539|gb|AEB46711.1| glycyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 459

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 24/90 (26%), Gaps = 3/90 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  +     K +     LR      E     +   G + +  D    P  +    
Sbjct: 366 VAVLPLSRNEALSPKAKDLAAQLRKR-WVVEFDDSQA--IGRRYRRQDEIGTPFCVTVDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWR 467
                  + I++     +    +   E + 
Sbjct: 423 DTLDDNAVTIRNRDTMAQERIALDQVERYL 452


>gi|327468388|gb|EGF13873.1| proline--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 616

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      +I     D ++L+        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHMIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|325688976|gb|EGD30984.1| proline--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 616

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.1 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D ++L+        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEEALTLTDQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|307708104|ref|ZP_07644572.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615889|gb|EFN95094.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 617

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.5 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDDEAQALTEKLEASLMGAGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +     N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLE 612


>gi|255535772|ref|YP_003096143.1| prolyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255341968|gb|ACU08081.1| Prolyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 491

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 72/255 (28%), Gaps = 31/255 (12%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIK----ISSTIVRGLEYYTGCVYEAI 310
             E        ++   E   + ++      N   I     I +   R          EA+
Sbjct: 170 WQEGHTAHATRDEALEETEKMLDVYADFTENFMAIPVIRGIKTESERFAGADETYCIEAL 229

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G   G        +R               +RL+ AL       L
Sbjct: 230 MQDGKALQAGTSHFLGQNFGKAFDVKFTNREGKIEHAWGTSWGTSTRLVGALIMTHSDDL 289

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + LS+           L+  GI  +    +    G + 
Sbjct: 290 GLVLPPSLAPIQVVIVPIFKGEEQLSQIDAVAYDLQAKLKAKGISVKYDNRTENKPGWKF 349

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + +  P+ I  G  +     ++I                   R   + + T P+  +
Sbjct: 350 AEYELKGVPIRIAMGARDLENKTVEI------------------ARRDNLTKETQPLEGI 391

Query: 482 VSTVKKILQENKEEI 496
            + ++++L+  +++I
Sbjct: 392 ENYIEELLKTIQKDI 406


>gi|251797403|ref|YP_003012134.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545029|gb|ACT02048.1| prolyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 482

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 37/102 (36%), Gaps = 18/102 (17%)

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
                L+ AG+R ++   S  + G +    + R  PL +  G  +   G + +     G+
Sbjct: 314 ELYAELKKAGVRVKVDDRSDVSPGWKFNEYEMRGVPLRLELGPRDMENGQVVLASRVSGE 373

Query: 455 ELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           +                    +    L++ V+ +L + + ++
Sbjct: 374 K------------------RIVRQDNLLAEVETMLADIQRDM 397


>gi|163746007|ref|ZP_02153366.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380752|gb|EDQ05162.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 648

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 44/388 (11%), Positives = 103/388 (26%), Gaps = 31/388 (7%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N  +I    + Y      +         +   +   +  G   +  D    + + +    
Sbjct: 273 NGWSIYTQLQDYMRRQQRKGGYVEVNTPQVVDRKLWEASGHWEKYQDHMFIVEVDEEHAR 332

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
                    +       +     K       ++ E     R        G+  V+     
Sbjct: 333 EKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRG---- 388

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D+   F     + +E    +     I  +                  G +E+   +E
Sbjct: 389 FTQDDGHIFCAEDQIEAETAKFIAFLSEIYRDLGFENFKVKFSDRPEKRSGSDEVWDKAE 448

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
               S   +  I+       G  Y      E +L   +  + Q            R D  
Sbjct: 449 AALLSATRAAGIEPELNPGEGAFYG--PKLEFVLTDAIGRDWQCGTHQVDFVLPERLDAT 506

Query: 338 VS-----RFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                  + +   +           + + ++              V++ ++  ++D    
Sbjct: 507 YIGADGGKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSEADDYVA 566

Query: 393 YQMYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGM 444
                + L+ AG+RAE  + + K        + G           P+ +  G  E     
Sbjct: 567 --EVVETLKAAGVRAEADMRNEKINYKVREHSVGK---------VPVILAVGAREVEERT 615

Query: 445 LQIKDLAKGKELSREIKNNESWREARVA 472
           + ++ L + K+ S +  +  +   A+ A
Sbjct: 616 VSVRRLGQ-KQTSVQPLDTLTAELAQDA 642


>gi|52842920|ref|YP_096719.1| threonyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52630031|gb|AAU28772.1| threonyl tRNA synthase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 646

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 3/96 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   +RN   ++G+  I TP L       K           +F  
Sbjct: 270 GMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKS-GHWANFRDEMFVT 328

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTY 109
           + ++ +  +++        +    +           
Sbjct: 329 ETEN-RHYAVKPMSCPCHVQIY-NHGLKSYRDLPLR 362



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +          +   + L+  GIRA   L  ++  G +++    +  P  +
Sbjct: 544 WLSPVQAIVLTISEKQNEYAEKVRKTLQKRGIRANFDL-RNEKIGFKIREHTLQKIPYLL 602

Query: 434 IQGTGERSRGMLQIK 448
           + G  E     + ++
Sbjct: 603 VVGDKEVENCQVAVR 617


>gi|42525539|ref|NP_970637.1| glycyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|59798570|sp|Q73RR5|SYG_TREDE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|41815550|gb|AAS10518.1| glycyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 451

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 34/128 (26%), Gaps = 21/128 (16%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +       V +  +          +     L+    +       S   G + +  D 
Sbjct: 343 LRFHPNIAPITVAVLPLMKKDGLAELAEEIRNELKEE-FKT--DYDQSGAIGKRYRRQDE 399

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
              P  +      +    + ++                      + Q+ IP +EL+S +K
Sbjct: 400 VGTPFCVTVDYDSKEDNTVTLR------------------FRDSMEQVRIPRTELISRIK 441

Query: 487 KILQENKE 494
             ++  K 
Sbjct: 442 TEIKNYKR 449


>gi|42523294|ref|NP_968674.1| hypothetical protein Bd1807 [Bdellovibrio bacteriovorus HD100]
 gi|39575499|emb|CAE79667.1| thrS [Bdellovibrio bacteriovorus HD100]
          Length = 416

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 29/258 (11%), Positives = 63/258 (24%), Gaps = 8/258 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + IR+ +    R +    G+  + +P L   D   +           ++  
Sbjct: 37  GLPLWLPAGVVIRDELEKLARELEFLAGYQRVVSPHLAKEDLYHQS-GHLPYYEDSMYPS 95

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            D +     LR             +         +YR  P+   E     R+        
Sbjct: 96  MDLENVRYRLRPMCCP-------HHHKIFSAKLHSYRELPLRLAEYGQVYRYEGSGALSG 148

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
                     DA + +        +      Y        I D  L        ++ +++
Sbjct: 149 LMRVRGLCQNDAHLYVRQNQVKVEIHKVLEMYQKAYRILGISDYRLRLSRGVEAEEASQK 208

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
            +     D  +    + +                 G  +  + + +     S    +   
Sbjct: 209 YVANPLWDWAEGILREVLVESGLPFFEAPGEAAFYGPKIDVQIMSVHGKEESASTVQVDF 268

Query: 254 ELYELVKGTIAGEKGFNE 271
              E    +   E+G  E
Sbjct: 269 ISAERFDLSFINEEGHKE 286



 Score = 37.5 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/188 (8%), Positives = 51/188 (27%), Gaps = 26/188 (13%)

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT----GFSIGISRLIVALKSL 365
           I+      E    V    +         ++    +  P              + + ++  
Sbjct: 251 IMSVHGKEESASTVQVDFISAERFDLSFINEEGHKERPVILHRAPLGSHERMVALLIELY 310

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
           + +         V I  +       ++       L  + IR  +    +++   ++    
Sbjct: 311 QGAFPLWLSPEQVRIVPLADRHQEAAEGLRLL--LHNSFIRVRVD-DRAESLSRKMAECW 367

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
           +      ++ G  E   G   +                   +    +  ++   EL+S +
Sbjct: 368 QEKVHSVVVIGDKELQAGKFSL-------------------QRRGASAQSVSAQELLSLL 408

Query: 486 KKILQENK 493
           +  +++ K
Sbjct: 409 QNEIRDRK 416


>gi|326538797|gb|ADZ87012.1| threonyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 661

 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 62/193 (32%), Gaps = 18/193 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   ++  +R   +++G+  + TP +    SL +           +F +
Sbjct: 268 GVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQV-LDKSLWETSGHWGWYRDNMFKV 326

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGRFR 126
                  DD +  +L+        +   ++        P +    G V R E  G     
Sbjct: 327 TVAGDDTDDDRVFALKPMNCPGHVQIF-KHGLKSYRDLPIKLAEFGNVHRYEPSGALH-- 383

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                    +     T D        + + A  ++ ND+ + +      + I  K+    
Sbjct: 384 -------GLMRVRGFTQDDAHIFCTEEQMAAECLQINDHILSVYKDFGFEEITIKLSTRP 436

Query: 187 DDKLNERLIVLRA 199
           + ++    +  RA
Sbjct: 437 EKRVGSDELWDRA 449



 Score = 40.2 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV-----I 275
           D++  F     + +E + I    LS+  +    E+   +        G +EL       +
Sbjct: 394 DDAHIFCTEEQMAAECLQINDHILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVM 453

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             ++ +    SN IK       G  Y     +E  L   +  E Q            R+ 
Sbjct: 454 MTVLEQIRQQSNNIKTGILPGEGAFYG--PKFEYTLKDAIGREWQCGTTQVDFNLPERFG 511

Query: 336 GLV-----SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                    + +   +           L + +++             V++ T+  D+D  
Sbjct: 512 AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATITSDADEY 571

Query: 391 SK---------YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +K                LR   I    +     +             P+ ++ G  E  
Sbjct: 572 AKEAAAKLKAAGLQVVTDLRNEKIN---YKVREHSLQK---------VPVILVCGKREAE 619

Query: 442 RGMLQIKDLAKGKELSREIKN 462
              + ++ L    + S  +  
Sbjct: 620 EKTVNMRRLGSRDQESMTLDE 640


>gi|329954822|ref|ZP_08295839.1| proline--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328526926|gb|EGF53937.1| proline--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 497

 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 70/235 (29%), Gaps = 24/235 (10%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  E   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYGEFAEKYMAVPVVKGVKSANERFAGALNTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQLKYADR--RNCPLAIIQGTGER 440
           ++ L+K           L++ GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 AEMLAKIDEKIAGIVAKLKSMGISVKYDNADNKRPG--FKFADYEVKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEE 495
               +++      ++ +R     E + +           +L+  ++  + +   +
Sbjct: 372 ENNTMEVMRRDTLEKETRSCDGIEEYVK-----------DLLEEIQANIYKKALD 415


>gi|326381627|ref|ZP_08203321.1| glycyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326199874|gb|EGD57054.1| glycyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 461

 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 8/92 (8%), Positives = 24/92 (26%), Gaps = 5/92 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           +  +  +     K +     LR    I        ++  G + +  D    P  +     
Sbjct: 370 VLPLSRNEKLSPKARDLAAELRKHWNI----EFDDAQGIGKRYRRQDEIGTPFCVTVDFD 425

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 + I++     +    +     +   +
Sbjct: 426 TLDDQAVTIRERDTMSQERVALDKVVEYLGGK 457


>gi|325686585|gb|EGD28611.1| proline--tRNA ligase [Streptococcus sanguinis SK72]
 gi|325697433|gb|EGD39319.1| proline--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 616

 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKTKKIMREEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.5 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D  +L+        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEKALALTDQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|323466334|gb|ADX70021.1| Proline-tRNA ligase [Lactobacillus helveticus H10]
          Length = 565

 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    I +  E      +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAEGIIEDEMEKINVPEMIMPHLLPA-TLWQESGRYKKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           +D  G+   L    + T      +A+N  +             
Sbjct: 97  KDRHGRESLLGPTHEET--FTEIIAKNLKSYKQMPLALYQIQT 137


>gi|296394225|ref|YP_003659109.1| glycyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181372|gb|ADG98278.1| glycyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 465

 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 9/92 (9%), Positives = 26/92 (28%), Gaps = 5/92 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           +  +  D   ++  +     LR    I        ++  G + +  D    P  +     
Sbjct: 373 VLPLQKDGGLVAAAKDLAARLRKRWNI----DYDETQAIGRRYRRQDEIGTPFCVTVDFE 428

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 + I++     +    +    ++   R
Sbjct: 429 SLEDQAVTIRERDTMSQQRVALDQVAAFLFER 460


>gi|226226691|ref|YP_002760797.1| threonyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089882|dbj|BAH38327.1| threonyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 660

 Score = 44.1 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 43/116 (37%), Gaps = 6/116 (5%)

Query: 9   AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNK 68
            + P G A    K   + N +   +R   +   F  I+TPLL Y+  L +      +  +
Sbjct: 262 PQAP-GAAFWTPKGTTLYNTLEGFVRER-QQEAFQEIKTPLL-YNKKLWEQSGHWGKYKE 318

Query: 69  GVFSLQDD--DGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            +F + D+      +SL+          + +E       P R      + RNE  G
Sbjct: 319 NMFLVLDNETGEHDMSLKPMNCPSHHVLFASEKHSYRQMPVRFVTFDVLHRNELSG 374



 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 35/120 (29%), Gaps = 11/120 (9%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR 406
                      + + ++    +         V +  +  D ++  +       ++ AGIR
Sbjct: 516 HRAVSGSFERFIAILIEHFAGAFPVWLAPEQVRVIPIAIDFNAHGQA--LVDRMKAAGIR 573

Query: 407 AEMFLGSSKNFGNQLKYADRRN----CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462
           A +   +       L Y  R       P   + G  E     + ++    GK+      +
Sbjct: 574 ATLDARNET-----LNYRVREGEVEKVPYMCVIGRRESEENTVALRTRGAGKKQEILSAD 628


>gi|307709960|ref|ZP_07646407.1| prolyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619331|gb|EFN98460.1| prolyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 617

 Score = 44.1 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.9 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +     N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLE 612


>gi|172053661|gb|ACB70968.1| pyrrolysyl-tRNA-synthetase [synthetic construct]
          Length = 420

 Score = 44.1 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 58/147 (39%), Gaps = 21/147 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRN----------------RILDSIRNIYENYGFDPIET 47
           + K+   + + F +   + +  R                 ++   I   + + GF  I++
Sbjct: 171 EDKISLNMAKPFRELEPELVTRRKNDFQRLYTNDREDYLGKLERDITKFFVDRGFLEIKS 230

Query: 48  PLLEYSDSLGKFLPDED-RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPC 106
           P+L  ++ + +   + D   +K +F + D +   + LR  L   L  Y+ +    +  P 
Sbjct: 231 PILIPAEYVERMGINNDTELSKQIFRV-DKN---LCLRPMLAPTLYNYLRKLDRILPGPI 286

Query: 107 RTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + + +GP +R E  G     +F   + 
Sbjct: 287 KIFEVGPCYRKESDGKEHLEEFTMVNF 313


>gi|322377188|ref|ZP_08051680.1| proline--tRNA ligase [Streptococcus sp. M334]
 gi|321281901|gb|EFX58909.1| proline--tRNA ligase [Streptococcus sp. M334]
          Length = 617

 Score = 44.1 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.9 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +     N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLE 612


>gi|19913912|gb|AAM03608.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 404

 Score = 44.1 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 7/133 (5%)

Query: 28  RILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED-RPNKGVFSLQDDDGQWISLRYD 86
           ++   I   + + GF  I++P+L  ++ + +   + D   +K VF   D +     LR  
Sbjct: 195 KLEREITKFFVDRGFLEIKSPILIPAEYVERMGINSDTELSKQVFR-IDKN---FCLRPM 250

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
           L   L  Y+ +    +  P + + IGP +R E  G     +F    ++     +      
Sbjct: 251 LAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTM--LNFCQMGSGCTREN 308

Query: 147 MCMMMADTLEAVG 159
           +  ++ + L  +G
Sbjct: 309 LEAIITEFLNHLG 321


>gi|322388633|ref|ZP_08062233.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140553|gb|EFX36058.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 617

 Score = 44.1 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 43/140 (30%), Gaps = 5/140 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKMGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +       +       ++   G  R    
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQ-PKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMM 150
              D     A     ++   
Sbjct: 156 IMKDGYSFHANYDSLDVTYD 175


>gi|124010058|ref|ZP_01694720.1| threonyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123983945|gb|EAY24340.1| threonyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 578

 Score = 44.1 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 12/119 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL------EYSDSLGKFLPDEDRP 66
           +G      K   +R R+ + +R      G+ P+ TP +      E S    K+  D  +P
Sbjct: 265 KGLPLWLPKGALLRERLENFMRRAQIKAGYSPVVTPHIGSKKLYETSGHWEKYGEDSFQP 324

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
                     +G+   L+           A    +    P R    G V+R E+ G   
Sbjct: 325 IA-----TPQEGEEFMLKPMNCPHHCEIYASKPRSYKDLPLRLAEFGTVYRYEQSGELH 378


>gi|87122885|ref|ZP_01078753.1| threonyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86161836|gb|EAQ63133.1| threonyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 572

 Score = 44.1 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 43/152 (28%), Gaps = 2/152 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   +   I   IR      G+  I+TP +     L +      + + G+F+ 
Sbjct: 262 GMVFWHHKGWSLYQTIEQYIRQKQRENGYQEIKTPQIVDR-VLWEKSGHWGKFSSGMFTT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             ++ +  +++        +   +   +                 +            + 
Sbjct: 321 HAEN-RDYAIKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHGIMRVRNF 379

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                     + ++   ++  ++ +    +D+
Sbjct: 380 VQDDGHIFVMEDQIQEEVSAFIKLLHEIYDDF 411


>gi|302389387|ref|YP_003825208.1| glycyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200015|gb|ADL07585.1| glycyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 460

 Score = 44.1 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 10/101 (9%), Positives = 28/101 (27%), Gaps = 3/101 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +         +  +          +     L+      E    ++ + G + +  D    
Sbjct: 360 HPDVAPIKCAVFPLFKKEPLEELARKIYHDLKKC-YVVE--YDNTGSIGKRYRRQDEIGT 416

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           P AI           + I++    ++    I N + +   +
Sbjct: 417 PYAITVDFDSLDDHKVTIRNRDTMQQDRIGIDNIKDYLRDK 457


>gi|289432623|ref|YP_003462496.1| glycyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946343|gb|ADC74040.1| glycyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 443

 Score = 44.1 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 27/240 (11%), Positives = 63/240 (26%), Gaps = 28/240 (11%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +      E      A +    E         +  G N   +++ +     L +Y    
Sbjct: 193 SREFEQMELEYFVKPGADDACLEEWTQYRLNWYKNLGMNPENLRLRAHRSDELAHYAKGC 252

Query: 307 YEAILGFP--------VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGIS 356
           Y+    FP        + N +   +   +   G   +      K   VP      +    
Sbjct: 253 YDVEYNFPMGWSELEGIANRRDFDLTQHAKYSGKSLEYFDEETKEHFVPYVIEPSAGVER 312

Query: 357 RLIVALKSLESSTNNIKEMGPV------------LITTMDHDSDSLSKYQMYTQMLRTAG 404
             +  L    +   +  E+  V             +  +          +     LR   
Sbjct: 313 STLAFLIDAYAEEPDKDEIRTVLHLHPALAPYKIAVLPLSKKEILSDYARKIYADLR--- 369

Query: 405 IRA-EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +   +    S++ G + +  D    P  +         GM+ ++D     ++  ++   
Sbjct: 370 -KCWMVAYDDSQSIGRRYRRQDEIGTPYCVTVDFQSLEDGMVTVRDRDSMAQIRVKVSEL 428


>gi|260101368|ref|ZP_05751605.1| proline-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260084820|gb|EEW68940.1| proline-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328465729|gb|EGF36933.1| prolyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 565

 Score = 44.1 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    I +  E      +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAEGIIEDEMEKINVPEMIMPHLLPA-TLWQESGRYKKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           +D  G+   L    + T      +A+N  +             
Sbjct: 97  KDRHGRESLLGPTHEET--FTEIIAKNLKSYKQMPLALYQIQT 137


>gi|307710999|ref|ZP_07647421.1| prolyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307616961|gb|EFN96139.1| prolyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 617

 Score = 44.1 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.9 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +     N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLE 612


>gi|315653428|ref|ZP_07906350.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489353|gb|EFU78993.1| proline--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 487

 Score = 44.1 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +    I    EN     +  P    + +L +      +    +F L
Sbjct: 53  GVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 111

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 112 KDRHGRESLLGP 123


>gi|307704119|ref|ZP_07641047.1| prolyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622341|gb|EFO01350.1| prolyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 617

 Score = 44.1 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  ++ L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAE-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNIKDEEAQALTEKLEANLMGAGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +   + N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHVDNLLETLE 612


>gi|299135303|ref|ZP_07028494.1| threonyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298590280|gb|EFI50484.1| threonyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 681

 Score = 44.1 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 67/219 (30%), Gaps = 8/219 (3%)

Query: 266 EKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVF 325
           +  ++    +   V       +  +I ++I  G   + G  +E +L   +  E Q     
Sbjct: 462 DAAWDHAESVMTKVLAQIEAKSGNRIKTSINPGEGAFYGPKFEYVLRDAIGREWQCGTTQ 521

Query: 326 GSVGGGGRY-----DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
                  R+     D   ++     V             + ++               +I
Sbjct: 522 VDFNLPERFGAFYIDEHSNKVAPVMVHRAICGSLERFTGILIEHFAGHFPLWLAPVQAVI 581

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
           TT+  D D     +   +  R AG+R E+ L  ++    +++       P  ++ G  E 
Sbjct: 582 TTITSDGD--DYAREVFEACRAAGLRVEIDL-RNEKINYKVREHSLAKVPALLVVGKKEA 638

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
               + I+ L +  +    +        A      +  +
Sbjct: 639 ETRAVSIRRLGREGQTVLPLDEALQALAAEATPPDVKRA 677


>gi|262382896|ref|ZP_06076033.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262295774|gb|EEY83705.1| glycyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 514

 Score = 44.1 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 32/111 (28%), Gaps = 11/111 (9%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K +    MLR    R +       + G + +  D    P  I      
Sbjct: 415 VLPLVKKDGLPEKAEEIINMLR-FDFRCQ--YDEKDSIGKRYRRQDAIGTPYCITVDHDT 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
                + I+     ++    I         +     + +  L   +KK+++
Sbjct: 472 LKDNCVTIRFRDTMEQERISIDKLHDIITEK-----VSMKNL---LKKVIE 514


>gi|119953163|ref|YP_945372.1| glycyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119861934|gb|AAX17702.1| glycyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 448

 Score = 44.1 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 18/81 (22%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           MF   +   G + +  D    P  +           + ++D                   
Sbjct: 377 MFYDDNGTIGKRYRRQDEIGTPYCVTVDYDTIENRTVTLRDRDS---------------- 420

Query: 469 ARVAQITIPISELVSTVKKIL 489
             +AQI IPI +L S ++  +
Sbjct: 421 --MAQIRIPIDDLYSYIRTEI 439


>gi|66819305|ref|XP_643312.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60471379|gb|EAL69339.1| prolyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 674

 Score = 44.1 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 27/85 (31%), Gaps = 2/85 (2%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K   +R  L  G         ++   I+  I    E  G   +  P +   + L +  
Sbjct: 76  MQKGGLIR-RLSAGTYSTLPLAQKVMENIIKIIDEEMEKVGGQKMSMPKMLPRE-LWEKT 133

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRY 85
              D     +  L+D  G+   L  
Sbjct: 134 GRWDSAGDDLIKLKDRKGEEYCLAP 158


>gi|330508032|ref|YP_004384460.1| prolyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928840|gb|AEB68642.1| prolyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 487

 Score = 44.1 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 46/135 (34%), Gaps = 5/135 (3%)

Query: 317 NEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMG 376
                     +      Y+      K  N    G S      ++++   +       E+ 
Sbjct: 241 GTAHHLGSTFAKTYEITYEAEDGEQKLVNQTCYGISERCIAALISVHGDDKGLALPWEVA 300

Query: 377 PVLITTM----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
           PV +  +          L   +   ++L+ AGIR E+   S +  G +    + +  P+ 
Sbjct: 301 PVQVVIVPILLGDKEKVLEVCRDLLRILQQAGIRVELD-TSDERPGAKFYKWEMKGVPIR 359

Query: 433 IIQGTGERSRGMLQI 447
           +  G  +  +G++ +
Sbjct: 360 LEVGPRDIEKGVVTV 374


>gi|255010000|ref|ZP_05282126.1| glycyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313147793|ref|ZP_07809986.1| glycyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313136560|gb|EFR53920.1| glycyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 513

 Score = 44.1 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 14/235 (5%), Positives = 48/235 (20%), Gaps = 29/235 (12%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
            +  +  +  G+  +  +                 E ++ F     +             
Sbjct: 287 EIRLKWHKALGFGDDHYRFHDHDKLAHYANAATDIEFLMPFGFKEVEGIHSRTNFDLSQH 346

Query: 333 --------RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL----- 379
                   +Y                        +  + +             ++     
Sbjct: 347 EKFSGKSIKYFDPELNESYTPYVIETSIGVDRMFLSIMSAAYCEEQLENGESRIVLKLPA 406

Query: 380 --------ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  +        K +     L               + G + +  D    P 
Sbjct: 407 ALAPVKLAVMPLVKKDGLPEKAREIIDNL---KFHFHCQYDEKDSIGKRYRRQDAIGTPY 463

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
            +           + +++    ++    I    +    R     + I+ L+ T++
Sbjct: 464 CVTVDHQTLEDNCVTLRNRDTMEQERVAISELNNIIADR-----VSITSLLKTIQ 513


>gi|210623133|ref|ZP_03293599.1| hypothetical protein CLOHIR_01549 [Clostridium hiranonis DSM 13275]
 gi|210153810|gb|EEA84816.1| hypothetical protein CLOHIR_01549 [Clostridium hiranonis DSM 13275]
          Length = 482

 Score = 44.1 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 24/249 (9%), Positives = 66/249 (26%), Gaps = 9/249 (3%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +         E  K T+   + + E+      +       +  +  +   R    
Sbjct: 160 EFLWQEGHTLHETYEEAEKETLDILQMYKEVCEDLLAMPVIDGQKSESEKFAGGERTYTI 219

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                                    +      +             + G S  +   ++ 
Sbjct: 220 EAMMH---DGKALQSGTSHFLGQHFTKAFDITFADREGGMSHPYHTSWGISTRLIGGLIM 276

Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
             S          + P  +  +   ++    + K       L+  G R E+    + + G
Sbjct: 277 THSDNRGLVLPPRIAPTQVMIIPIAANKGGVMEKVDELYAALKEKGARVEVDDRPNYSTG 336

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +L  ++ +  P+ I  G  +       +      ++ +  + N   +       I    
Sbjct: 337 YKLNDSEMKGIPVRIEIGPKDIENNQAMVFRRDTLEKEAVSLDNLVEYVTGLFDTIH--- 393

Query: 479 SELVSTVKK 487
           ++++   +K
Sbjct: 394 NDMLEKARK 402


>gi|325962743|ref|YP_004240649.1| glycyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468830|gb|ADX72515.1| glycyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 461

 Score = 44.1 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 5/92 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           +  +  + D   K +     LR    I        +   G + +  D    P  I     
Sbjct: 370 VLPLSRNEDLSPKAKDLGAQLRKNWNI----DFDDAGAIGRRYRRQDEIGTPFCITVDFD 425

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 + I++     +    +   E +  AR
Sbjct: 426 TLEDQAVTIRERDTMSQERVSLDKVEGYLAAR 457


>gi|150002813|ref|YP_001297557.1| glycyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254882314|ref|ZP_05255024.1| glycyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294777258|ref|ZP_06742713.1| glycine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319643076|ref|ZP_07997707.1| glycyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|149931237|gb|ABR37935.1| glycyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254835107|gb|EET15416.1| glycyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294448878|gb|EFG17423.1| glycine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317385244|gb|EFV66192.1| glycyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 513

 Score = 44.1 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 21/266 (7%), Positives = 56/266 (21%), Gaps = 29/266 (10%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+    E    E+   VK     E          +  +  G+  +  +           
Sbjct: 256 QFIFRMREFEQMEMQFFVKPGTELEWFPKWKETRLKWHKALGFGDDHYRFHDHDKLAHYA 315

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGG--------RYDGLVSRFKGQNVPATGFSI 353
                 E ++ F     +                     +Y                   
Sbjct: 316 NAATDIEFLMPFGFKEVEGIHSRTNFDLSQHEKFSGKSIKYFDPELNESYTPYVIETSIG 375

Query: 354 GISRLIVALKSLESSTNNIKEMGPVL-------------ITTMDHDSDSLSKYQMYTQML 400
                +  + +  +          V+             +  +        K +     L
Sbjct: 376 VDRMFLSIMSAAYTEETLENGETRVVLKLPAALAPVKLAVMPLVKKDGLPEKAREIMNDL 435

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
                          + G + +  D    P  I           + +++    ++    I
Sbjct: 436 ---KFHFHCQYDEKDSIGKRYRRQDAIGTPYCITVDHQTLEDNCVTLRNRDTMQQERVAI 492

Query: 461 KNNESWREARVAQITIPISELVSTVK 486
               +    +     + I+ L+ T++
Sbjct: 493 SELNNIIADK-----VSITSLLKTLQ 513


>gi|24380149|ref|NP_722104.1| prolyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|81845206|sp|Q8DSJ9|SYP_STRMU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|24378150|gb|AAN59410.1|AE015006_3 putative prolyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 616

 Score = 44.1 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +I   +R  ++  G   +  P L  +D L +         + ++ L
Sbjct: 38  GIYSYLPLAHRVIEKIKKIMREEFDKIGAVEMLAPALLTAD-LWRESGRYGTYGEDLYKL 96

Query: 74  QDDDGQWISLRY 85
           ++ D     L  
Sbjct: 97  KNRDQSDFILGP 108


>gi|73748597|ref|YP_307836.1| glycyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|73660313|emb|CAI82920.1| glycyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 433

 Score = 44.1 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 27/240 (11%), Positives = 63/240 (26%), Gaps = 28/240 (11%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVI-SELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
             +      E      A +    E         +  G N   +++ +     L +Y    
Sbjct: 183 SREFEQMELEYFVKPGADDACLEEWTQYRLNWYKNLGMNPENLRLRAHRSDELAHYAKGC 242

Query: 307 YEAILGFP--------VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGIS 356
           Y+    FP        + N +   +   +   G   +      K   VP      +    
Sbjct: 243 YDVEYNFPMGWSELEGIANRRDFDLTQHAKYSGKSLEYFDEETKEHFVPYVIEPSAGVER 302

Query: 357 RLIVALKSLESSTNNIKEMGPV------------LITTMDHDSDSLSKYQMYTQMLRTAG 404
             +  L    +   +  E+  V             +  +          +     LR   
Sbjct: 303 STLAFLIDAYAEEPDKDEIRTVLHLHPALAPYKIAVLPLSKKEILSDYARKIYADLR--- 359

Query: 405 IRA-EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
            +   +    S++ G + +  D    P  +         GM+ ++D     ++  ++   
Sbjct: 360 -KCWMVAYDDSQSIGRRYRRQDEIGTPYCVTVDFQSLEDGMVTVRDRDSMAQIRVKVSEL 418


>gi|53728893|ref|ZP_00134603.2| COG0441: Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126207707|ref|YP_001052932.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|166223315|sp|A3MYU1|SYT_ACTP2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126096499|gb|ABN73327.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 643

 Score = 44.1 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 89/346 (25%), Gaps = 16/346 (4%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G + +   +E        +N +        G  Y     +       
Sbjct: 416 IQVKLSTRPENRIGDDAMWDRAEDGLAKALTANGLSYEIQEGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    +       G      V+   G+  P       +G     + + + E +    
Sbjct: 476 REWQCG-TIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ---LKYADRRN 428
             + P     M+         Q  T+ L  AGIR +  L + K  F  +   L+      
Sbjct: 535 TWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRVKSDLRNEKVGFKVREHTLRR----- 589

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            P  ++ G  E   G + ++     K         + + E    Q+
Sbjct: 590 VPYMLVCGDKEIEAGKVSVR---TRKGADLGTFTIDEFVEILKNQV 632


>gi|253568239|ref|ZP_04845650.1| prolyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251842312|gb|EES70392.1| prolyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 497

 Score = 44.1 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 68/235 (28%), Gaps = 17/235 (7%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        ++   E    L V  E   K         + S   R          EA+
Sbjct: 173 WQEGHTAHATRKEAEEEAIRMLNVYGEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           V++               +RL+ AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKAFDVQFVNKENKMEYVWATSWGVSTRLMGALIMTHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +  + + L    +K +     L+  GI  +     +K  G   
Sbjct: 293 GLVLPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           K+AD   +  P+ ++ G  +     +++      ++ +      E++ +  + +I
Sbjct: 351 KFADYELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETYVQKLLEEI 405


>gi|256832756|ref|YP_003161483.1| glycyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686287|gb|ACV09180.1| glycyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 461

 Score = 44.1 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 26/92 (28%), Gaps = 7/92 (7%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRT--AGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
           V +  +  ++D   K +     LR         +    +   G + +  D    P  I  
Sbjct: 368 VAVLPLSRNADLSPKARDLAADLRQFWN-----VDFDDAGAIGRRYRRQDEIGTPFCITV 422

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWR 467
                    + I+     ++    +    ++ 
Sbjct: 423 DFDTLEDNAVTIRHRDSMEQHRVALDQVRTYL 454


>gi|223996893|ref|XP_002288120.1| glycyl tRNA synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220977236|gb|EED95563.1| glycyl tRNA synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 462

 Score = 44.1 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 23/259 (8%), Positives = 61/259 (23%), Gaps = 27/259 (10%)

Query: 237 IDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIV 296
           I           ++ + +    +K     E+     V   + +         I       
Sbjct: 224 IPPGDEAWKPFHKQWIEDSESFLKSVGLKEELMGYDVHEGDGLAHYARACTDITFKFPFG 283

Query: 297 RGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGIS 356
                      +  L        +    F           ++    G +           
Sbjct: 284 VQELMGIAARGDFDLKSHTEGSGKVLDYFDEETKEKFIPHVIEPSLGVDRLILALICSAY 343

Query: 357 RLIVALKSLESSTNNIKEMGPVLITTMDHDSD---SLSKYQMYTQML-RTAGIRAEMFLG 412
                     +  +    + PV ++ +    +    +   +   + L R           
Sbjct: 344 AEDEINGEKRNYLSFHPSIAPVKVSVLPLVKNKEPLVKAARELFEKLQRRWN----CQWD 399

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERS-RGMLQIKDLAKGKELSREIKNNESWREARV 471
            +   G + + AD    P  +          G + ++D    +++               
Sbjct: 400 QTGAIGRRYRRADEIGVPFCVTVDFETIEDDGAVTVRDRDSTEQV--------------- 444

Query: 472 AQITIPISELVSTVKKILQ 490
               IP+ E+V  + K++ 
Sbjct: 445 ---RIPMDEVVPYLSKMID 460


>gi|307245030|ref|ZP_07527126.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307253984|ref|ZP_07535834.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307258439|ref|ZP_07540179.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306854073|gb|EFM86282.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306863062|gb|EFM95006.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306867501|gb|EFM99349.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 643

 Score = 44.1 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 89/346 (25%), Gaps = 16/346 (4%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G + +   +E        +N +        G  Y     +       
Sbjct: 416 IQVKLSTRPENRIGDDAMWDRAEDGLAKALTANGLSYEIQEGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    +       G      V+   G+  P       +G     + + + E +    
Sbjct: 476 REWQCG-TIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ---LKYADRRN 428
             + P     M+         Q  T+ L  AGIR +  L + K  F  +   L+      
Sbjct: 535 TWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRVKSDLRNEKVGFKVREHTLRR----- 589

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            P  ++ G  E   G + ++     K         + + E    Q+
Sbjct: 590 VPYMLVCGDKEIEAGKVSVR---TRKGADLGTFTIDEFVEILKNQV 632


>gi|302534311|ref|ZP_07286653.1| glycyl-tRNA synthetase [Streptomyces sp. C]
 gi|302443206|gb|EFL15022.1| glycyl-tRNA synthetase [Streptomyces sp. C]
          Length = 460

 Score = 44.1 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  +++   K +     LR      E     +   G + +  D    P  +    
Sbjct: 367 VAVLPLSRNANLSPKAKGLAADLRK-NWNIEFD--DAGAIGRRYRRQDEIGTPFCVTVDF 423

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    K+    +   +S+  +R
Sbjct: 424 DTLDDNAVTVRERDTMKQERVSLDQIQSYLGSR 456


>gi|163791590|ref|ZP_02185991.1| prolyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873139|gb|EDP67242.1| prolyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 568

 Score = 44.1 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+  ++   +R  +E      +  P L   + L +     +     
Sbjct: 34  QISSGVYSYLPLANRVIEKLKTIMREEFEKIDAVEMLMPSLLPRE-LWEESGRYETYGDD 92

Query: 70  VFSLQDDDGQWISLRY 85
           +  LQD  G+   L  
Sbjct: 93  LMKLQDRHGRDYLLGP 108



 Score = 42.1 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 2/103 (1%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +   +   ++      L+       D ++      + L+ AG    +   + +  G + K
Sbjct: 459 EEGLNWPRHLSPFELHLVPVNMKADDQVTLSNELYETLQHAGFSVLLDDRNER-VGVKFK 517

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            +D    P+ I  G       ++++K    G+ L         
Sbjct: 518 DSDLIGLPIRITVGKK-AQENIVELKLRKTGEALEVRADELVD 559


>gi|124023562|ref|YP_001017869.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166225478|sp|A2CAU4|SYT_PROM3 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123963848|gb|ABM78604.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9303]
          Length = 640

 Score = 44.1 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   IR     + +  I TP +       K     ++    +F+ 
Sbjct: 261 GMIFWHAKGWAIYQVLEQYIRETLSLHAYQEIRTPQVVDRSLWEKS-GHWEKFKDDMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 319 TTSENREYAIKPMNCPCHVQIFNQGLKSYRDLPIRLAEFGSCLRNEPSGSLH 370



 Score = 41.0 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M     +    Q   + L     R E+ L  ++  G +++    +  P  I
Sbjct: 535 WLAPVQVAVMGITDRNAQTCQDVCKKLSALEYRTEVDL-RNEKIGFKVREHTLQRVPFLI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E+  G + ++        S  + +  S  +  +A
Sbjct: 594 IIGDKEQQSGEVAVRTREGKDFGSMPLNSFISLLDEAIA 632


>gi|56295619|emb|CAH04860.1| partial threonyl-tRNA synthetase (HrrS) [uncultured archaeon]
          Length = 478

 Score = 44.1 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 7/109 (6%)

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
            ALK  + +         V I  +        +Y          G+R ++   S +    
Sbjct: 353 EALKKEQPTLPVWLSPTQVRIIPVSEKQLEYCRYLDI------DGVRYDVD-DSDETLAK 405

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++  A     P   + G  E   G+L +     GK ++   +       
Sbjct: 406 KIAKASTEWIPYVAVVGDREAESGVLSVSIRETGKRVTMTREELAQEVR 454


>gi|303325499|ref|ZP_07355942.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863415|gb|EFL86346.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 648

 Score = 44.1 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 9/105 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +R  + D  R  +   G+D ++ P L   ++  +     D   + ++  
Sbjct: 265 GMVFWLPKGMLVRAILEDFWRKEHLKRGYDMVQGPQLLRVETWQRS-GHYDHYRENMY-F 322

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              +     ++             +        R+YR  P    E
Sbjct: 323 TRIEDDAYGIKPMN-------CIAHMLIYKNELRSYRDLPQRYFE 360



 Score = 40.2 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 44/136 (32%), Gaps = 5/136 (3%)

Query: 339 SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQ 398
            R +   V           + V ++    +           + T+    D+  +      
Sbjct: 505 ERHRPVMVHRAIMGSLERFIGVLIEQYAGALPAWLAPEQARLLTVTEAGDATVERMR--G 562

Query: 399 MLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSR 458
            L+  GIR       ++  G +++ A     P  ++ G  E     + ++ L  G+ L  
Sbjct: 563 ELQALGIRV-TADTRNEKLGFKVREAQVAKVPYILVVGEKEVQADGVNVR-LRSGENLGL 620

Query: 459 E-IKNNESWREARVAQ 473
           + I +  +   A   +
Sbjct: 621 KSIADVAALIRADAEE 636


>gi|242090883|ref|XP_002441274.1| hypothetical protein SORBIDRAFT_09g023590 [Sorghum bicolor]
 gi|241946559|gb|EES19704.1| hypothetical protein SORBIDRAFT_09g023590 [Sorghum bicolor]
          Length = 508

 Score = 44.1 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 22/166 (13%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD----SL 390
           +  V     QN  A         ++                  V++  + +         
Sbjct: 270 EKGVREMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPKVAPIQVIVIPVPYKDADTTAIK 329

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +     L  +G RA++    + + G +  + + +  PL I  G  + +   ++I   
Sbjct: 330 GACESAVYTLNQSGFRADLDTRENYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRI--- 386

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           R    A++ IP++ LV  VK +L   ++ +
Sbjct: 387 ---------------VRRDNGAKVDIPVTNLVEEVKVLLDGIQKNL 417


>gi|85057389|ref|YP_456305.1| glycyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789494|gb|ABC65226.1| glycyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 452

 Score = 44.1 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 22/230 (9%), Positives = 60/230 (26%), Gaps = 7/230 (3%)

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
                 +K M++   ++       K  +          K        K            
Sbjct: 226 HWFNHWKKLMYDFLIILGMNPQNLKFKDHKKEDLSHYSKQTC-DILFKFPWGFDELWGIA 284

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL 362
           +   ++        N K+    F           ++    G       F I         
Sbjct: 285 SRTNFDLKTHQK--NSKKDLTYFDETTKQKILPYVIEPSLGIERLFFAFLINNYHENSTS 342

Query: 363 KSLESSTNNIKEMGPVLITTMDH-DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                  +    + P  +  +        +K Q   Q L  A    ++    +K+ G + 
Sbjct: 343 NETRQILSFHPFLAPYKVAVLPLIKKKHSAKAQEINQYL--AKYF-DVCYDETKSIGKRY 399

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           +  D    P  I       +  ++ +++    ++ +  +   + + + ++
Sbjct: 400 RRQDMIGTPFCITVDDQTLTHNIITLRNRDTAQQQTFLLTEVKQYIQEKI 449


>gi|229826593|ref|ZP_04452662.1| hypothetical protein GCWU000182_01968 [Abiotrophia defectiva ATCC
           49176]
 gi|229789463|gb|EEP25577.1| hypothetical protein GCWU000182_01968 [Abiotrophia defectiva ATCC
           49176]
          Length = 507

 Score = 44.1 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 30/191 (15%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                F     +   V F       +Y    S      +      +      + L     
Sbjct: 260 GTSHNFGDGFARAYDVTFTDKDNSIQYAHQTSWGVSTRMIGAIIMVHGDDNGLVL----- 314

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR- 426
               I     ++I  M +    L K       L +A  R ++   S K  G   K+AD+ 
Sbjct: 315 -PPRIAPTQVMIIPIMQNKEGVLEKANELKNRL-SADFRVKLD-DSDKTPG--FKFADQE 369

Query: 427 -RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
            R  P+ +  G  +       +                   R     +  + + EL + +
Sbjct: 370 MRGIPVRVEIGPKDIEANKCIV------------------VRRDNREKTEVSLDELETKL 411

Query: 486 KKILQENKEEI 496
            +IL+  ++++
Sbjct: 412 AEILESIQKDM 422


>gi|171691298|ref|XP_001910574.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945597|emb|CAP71710.1| unnamed protein product [Podospora anserina S mat+]
          Length = 551

 Score = 44.1 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 18/110 (16%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              L +      +L+ AG+R E+          +    + +  P+ +  G  + ++ ++ 
Sbjct: 353 EKHLDRMYELLAILKKAGVRTEIDTREGYTPAWKFNDWEMKGVPVRLEFGPKDAAKDVVS 412

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                 G++                   TIPI EL + V ++L+  ++++
Sbjct: 413 FARRDTGEK------------------GTIPIGELTTKVPELLETIQQDM 444


>gi|149916340|ref|ZP_01904860.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149809794|gb|EDM69646.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 663

 Score = 44.1 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 46/384 (11%), Positives = 102/384 (26%), Gaps = 26/384 (6%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N  TI    + Y      R         +   +   +  G   +  +    + + +    
Sbjct: 273 NGWTIYTTLQDYMRRQQRRGGYVEVNTPQVVDRKLWEASGHWDKYQEHMFIVEVDEDHAR 332

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
                    +       +     K       ++ E     R        G+  V+     
Sbjct: 333 EKSINALKPMNCPCHVQIFNRGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRG---- 388

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F +   + +E    +     I  +    +             G +++   SE
Sbjct: 389 FTQDDAHIFCREDQIEAETKKFIGFLSEIYRDLGFSDFKVKFSDRPEKRAGSDDVWDKSE 448

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
              K+   +        +  G  Y      E +L   +  + Q   +        R D  
Sbjct: 449 SALKAATAAAGADFELNLGEGAFYG--PKLEFVLTDAIGRDWQCGTLQVDFVLPERLDAT 506

Query: 338 VSRFKGQNVPAT---GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                G            +G     + +   E +      M P  +      S++ +  Q
Sbjct: 507 YIAEDGAKHRPVMLHRAVLGSFERFIGILIEEHAGKLPFWMAPRQVVVASIVSEANAYVQ 566

Query: 395 MYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                L  AG+RAE  + + K        + G           P+ +  G  E   G + 
Sbjct: 567 DVVARLVAAGVRAEADIRNEKINYKVREHSVGK---------VPVILACGMKEVEDGTVS 617

Query: 447 IKDLAKGKELSREIKNNESWREAR 470
           ++ L + +   + + +     +  
Sbjct: 618 LRRLGEKQSTVQPLADVTEALKRE 641


>gi|81428868|ref|YP_395868.1| prolyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|114152205|sp|Q38W72|SYP_LACSS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78610510|emb|CAI55561.1| Prolyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 569

 Score = 44.1 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 40/126 (31%), Gaps = 20/126 (15%)

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             + I      ++     D   +   +    +L  AG    +     +  G +   +D  
Sbjct: 464 WPSAIAPYDLHVVPVNVKDDAQVELAEQIEGLLEEAGYSVLVDDRKERA-GVKFADSDLI 522

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P+ I  G    +  ++++K    G+                   + +   EL++++  
Sbjct: 523 GLPIRITVGKK-AAEEIVEVKLRKTGE------------------TLEVKKDELINSLSI 563

Query: 488 ILQENK 493
           +L   K
Sbjct: 564 LLASEK 569



 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 30/115 (26%), Gaps = 8/115 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+   I   I++         ++ P +  ++ L +           +F  
Sbjct: 38  GVYSYLPLAYRVLENIQAIIKDEMSKIDAVQMQMPGILPAE-LWEESGRYATYGPNLFKF 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
           +D   +   L    + T A L R    N                 +       R+
Sbjct: 97  KDRHSRDFILGPTHEETFADLVR----NNIKSYKKLPLTLYQIQTKYRDEDRPRY 147


>gi|212223716|ref|YP_002306952.1| prolyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008673|gb|ACJ16055.1| prolyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 482

 Score = 43.7 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 73/253 (28%), Gaps = 27/253 (10%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             E +         E+   E + I + + K       +       +    Y     E ++
Sbjct: 159 FFEAHTAHDSFEDAERQIKEDLEIFDNLAKFLAIPYIVSKRPDWDKFPGAYYSLGAEVMM 218

Query: 312 GFPVMNEKQKPVVFGSVGGGGR---YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                 +      +           Y+      +  +    G S  +   ++A+   +  
Sbjct: 219 PDGRTLQIGTMHNYRQNFAKAYEILYETENGDHEYVHQTTFGMSERLLAAVIAIHGDDRG 278

Query: 369 TNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                 + P+ +  +     D  +D  +  +   + LRTAG+R  +        G +   
Sbjct: 279 MVLPPTIAPIQVVIVPIPKKDAGADVFTYAREIAEELRTAGLRVHVD-ERDIRPGRKFYD 337

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  PL I  G  +       +                   R   + + T+    +V 
Sbjct: 338 WELKGVPLRIEVGPRDVEGRKAVL------------------ARRDTLTKETVERDRIVE 379

Query: 484 TVKKILQENKEEI 496
            V++ L E  E +
Sbjct: 380 AVRRTLDEIHENL 392



 Score = 37.1 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 42/156 (26%), Gaps = 11/156 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        ++I   I   I    E  G D +  P L       K           V
Sbjct: 31  PVKGMNIWLPYGLKIMRNIERFIHAEMERTGHDEVLFPALIPETEFQKEAEHIAGFEGEV 90

Query: 71  FSLQDDDGQW-----ISLRYDLTAPLARY---VAENFDTIVFPCRTYRIGPVFRNEKHGP 122
           F      G       + LR   T+  A Y             P + Y+I   +R E    
Sbjct: 91  F-WVTHAGHDPLDIKLILRP--TSETAMYSMFALWIRSHADLPFKVYQIVNTYRYETKHT 147

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
               +  +        +A  +  +    + + LE  
Sbjct: 148 RPLIRVREISRFFEAHTAHDSFEDAERQIKEDLEIF 183


>gi|33862697|ref|NP_894257.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|73919817|sp|Q7V8D2|SYT_PROMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33634613|emb|CAE20599.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9313]
          Length = 640

 Score = 43.7 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K   I   +   IR     + +  I TP +       K     ++    +F+ 
Sbjct: 261 GMIFWHAKGWAIYQVLEQYIRETLSLHDYQEIRTPQVVDRSLWEKS-GHWEKFKDDMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
              + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 319 TTSENREYAIKPMNCPCHVQIFNQGLKSYRDLPIRLAEFGSCLRNEPSGSLH 370



 Score = 43.7 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  M     +    Q   + L     R E+ L  ++  G +++    +  P  I
Sbjct: 535 WLAPVQVVVMGITDRNAQACQDICKKLSALEYRTEVDL-RNEKIGFKVREHTLQRVPFLI 593

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
           I G  E+  G + ++        S  +K   S  +  +A
Sbjct: 594 IIGDKEQQSGEVAVRTREGKDFGSMPLKGFTSLLDEAIA 632


>gi|149235762|ref|XP_001523759.1| hypothetical protein LELG_05175 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452738|gb|EDK46994.1| hypothetical protein LELG_05175 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 688

 Score = 43.7 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 13/140 (9%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSK--------YQMYTQMLRTAGIRAEMFLGSS 414
            +             V++  +   + + ++               L+ AGIR       S
Sbjct: 461 DNKGLVLPPRVAQTQVVVIPVGITAKTSAEQREQINKGAADIESRLKKAGIRVTGDYRDS 520

Query: 415 KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ-IKDLAKGKELSREIKNNESWREARVAQ 473
            N G +    + +  PL +  G  +     +  ++    G++L+ ++   ES     + +
Sbjct: 521 YNPGWKFADWELKGVPLRVEFGPKDLESEQVTAVR-RNDGQKLNVKLAGLESSIAEVLEK 579

Query: 474 ITIPISELVSTVKKILQENK 493
           I    ++L++   K   E++
Sbjct: 580 I---QADLLAKATKEFDEHR 596


>gi|147669357|ref|YP_001214175.1| glycyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|146270305|gb|ABQ17297.1| glycyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 443

 Score = 43.7 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 9/98 (9%), Positives = 28/98 (28%), Gaps = 5/98 (5%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EMFLGSSKNFGNQLKYAD 425
              +       + +  +          +     LR    +   +    S++ G + +  D
Sbjct: 335 LHLHPALAPYKIAVLPLSKKEILSDYARKIYADLR----KCWMVAYDDSQSIGRRYRRQD 390

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               P  +         GM+ ++D     ++  ++   
Sbjct: 391 EIGTPYCVTVDFQSLEDGMVTVRDRDSMAQIRVKVSEL 428


>gi|305664329|ref|YP_003860617.1| prolyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378898|gb|ADM28737.1| prolyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 493

 Score = 43.7 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 76/257 (29%), Gaps = 39/257 (15%)

Query: 259 VKGTIAGEKGFNELV-VISELVRKSGYNSNRIKISSTIVRGLEYYTG------CVYEAIL 311
            K      + F +    + E +       + + I   I R  ++           ++ + 
Sbjct: 162 FKEAHTVHENFEDSERQVLEAIDIYSKFFDELGIPYIISRRPQWDKFAGALYTIAFDTVF 221

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLE 366
                 +       G          +  R +  +           R+I ++       + 
Sbjct: 222 PDGRAIQIGTVHNLGQTFTSVFDVKIQKRDETIDYAWQTSYGISERVIASIIAIHSDDIG 281

Query: 367 SSTNNIKEMGPVLITTMDHDSDSL-----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
               +      V+I  + H  + +     +       +L+   IR+ +          + 
Sbjct: 282 LILPSNVAPYTVVIIPIPHQDEKIYQSIINYCNDIHNILKVNNIRSLIDERLDVKPAEKY 341

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +  + +  P+ I  G  E S+  + +  +DL K                      TI   
Sbjct: 342 RECELKGVPIRIEIGFKEVSQNTVTLFRRDLRKR--------------------FTINKD 381

Query: 480 ELVSTVKKILQENKEEI 496
           EL+S +K +L+E  + +
Sbjct: 382 ELISVIKNVLEEYNKNL 398



 Score = 38.7 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 6/80 (7%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G         +IR  +++ IRN+    G + +  P+L       +           V
Sbjct: 34  PVKGMGIWMPYGFQIRRNVIEIIRNLLNETGHEEVLFPILIPEILFRRESEHVRGFEGEV 93

Query: 71  FSLQDDDGQW-----ISLRY 85
                  G       + LR 
Sbjct: 94  L-WVTRGGNEELDVKLVLRP 112


>gi|254447045|ref|ZP_05060512.1| prolyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263184|gb|EDY87462.1| prolyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 522

 Score = 43.7 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 9/87 (10%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 27  NRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRY- 85
            ++   +R    + G   +  P ++ ++ L +     ++    +  L D   +       
Sbjct: 3   KKVEAIVREEMNSAGGVELLMPTIQPTE-LWQESGRLEQYGPELLRLSDRHERPFCYGPT 61

Query: 86  --DLTAPLARYVAENFDTIVFPCRTYR 110
             ++   LAR   +++  +       +
Sbjct: 62  HEEVITDLARREIKSYKQLPVNFYQIQ 88


>gi|225011920|ref|ZP_03702358.1| prolyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004423|gb|EEG42395.1| prolyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 492

 Score = 43.7 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 65/264 (24%), Gaps = 33/264 (12%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E +       + + +       V           + +   R    
Sbjct: 168 EFLWQEGHTAHATKAEAMTEAKLMNQVYADF------VENYMAIPVIQGVKTESERFAGA 221

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 EA++      +       G            +   G            +RLI A
Sbjct: 222 EETFCIEALMQDGKALQAGTSHFLGQNFAKAFDVKYATAEGGLEYVWATSWGVSTRLIGA 281

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM----LRTAGIRAEMFLG 412
           L                    V+I  +    +  +K     +     L    IR +    
Sbjct: 282 LIMTHSDDNGLVLPPNLAPTQVVIIPIYRGEEEQNKVAATAEKIKVALEEQNIRVKFDNR 341

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                G +    + +  PL I  G  +   G ++I                   R   + 
Sbjct: 342 DKFKPGYKFNDYELKGVPLRIAIGPKDLQNGTVEI------------------ARRDNLT 383

Query: 473 QITIPISELVSTVKKILQENKEEI 496
           +  +   E+V  +   L + + ++
Sbjct: 384 KEVVSQDEIVDYISSQLAQIQIDL 407


>gi|154493369|ref|ZP_02032689.1| hypothetical protein PARMER_02706 [Parabacteroides merdae ATCC
           43184]
 gi|154086579|gb|EDN85624.1| hypothetical protein PARMER_02706 [Parabacteroides merdae ATCC
           43184]
          Length = 514

 Score = 43.7 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 25/265 (9%), Positives = 59/265 (22%), Gaps = 29/265 (10%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            F+    E    E+   V+     E          +  +  G  + + +           
Sbjct: 256 QFIFRMREFEQMEMQFFVRPGEEMEWFKQWKATRLKWHQAMGLGNEKYRYHDHEKLAHYA 315

Query: 302 YTGCVYEAILGFP------VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP-------- 347
                 E  + F       + +     +       G +             P        
Sbjct: 316 NAATDIEFEMPFGFKEVEGIHSRTNFDLSQHEKFSGKKIQYFDPELNQSYTPYVIETSIG 375

Query: 348 ---ATGFSIGISRLIVALKSLE----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                   +  S     L++ E               + +  +        K +   +ML
Sbjct: 376 VDRVFLSVMAGSYCEETLENGETRVVLKLPAALAPIKLAVLPLVKKDGLPEKAEEIMKML 435

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
           R    R +       + G + +  D    P  I           + I+     ++    I
Sbjct: 436 R-FDFRCQ--YDEKDSIGKRYRRQDAIGTPYCITVDHDTLKDNCVTIRFRDTMEQERVSI 492

Query: 461 KNNESWREARVAQITIPISELVSTV 485
                    +     + +  L+  +
Sbjct: 493 DKLHDIISEK-----VSMKNLLKKI 512


>gi|319948489|ref|ZP_08022623.1| threonyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437856|gb|EFV92842.1| threonyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 699

 Score = 43.7 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 46/153 (30%), Gaps = 10/153 (6%)

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
            Y+      K   +        I R    L    +       + PV +  +         
Sbjct: 550 TYNAADGTKKRPVMIHRALFGSIERFFAVLLEHYAGLFP-AWLAPVQVVGIPVAEAHEKH 608

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     LR  GIRAE+   S +    +++       P  ++ G  +   G +  +    
Sbjct: 609 LEDVIDELRGRGIRAELD-TSDERMQKKIRNHTTGKVPFMLLAGDRDVEAGAVSFR-FPD 666

Query: 453 GKE-----LSREIKNNESWREARVAQITIPISE 480
           G +      +  +     W  +R     +P +E
Sbjct: 667 GTQLNGVSRNAAMDKIAYWINSRRN--DVPTAE 697


>gi|332655151|ref|ZP_08420892.1| proline--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516011|gb|EGJ45620.1| proline--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 480

 Score = 43.7 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 63/209 (30%), Gaps = 7/209 (3%)

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            A ++    L + ++ +             +   +          E ++      +    
Sbjct: 175 EARQETQQMLNIYADFLENVLAMPVVKGRKTDKEKFNGAEETYTVECMMHDKKALQSGTS 234

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVP-ATGFSIGISRLIVALKSLESS-----TNNIKEMG 376
             FG             +    + P  T + +    +   + +   +        I  + 
Sbjct: 235 HYFGDGFARAFDITFTGKDNQLHYPHQTSWGVSTRMIGGIIMTHGDNNGLVLPPRIAPIQ 294

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            ++I    H    L         L+ AGIRA M   S ++ G +    + +  PL +  G
Sbjct: 295 AMVIPVAQHKEGVLDAATDLLNRLKAAGIRASMD-ASDQSMGWKAAQYEMKGVPLRVEIG 353

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNES 465
             +  +G   I     G+++   +   E+
Sbjct: 354 PKDMEKGQCCICRRDSGEKIFVPLAELET 382


>gi|115376687|ref|ZP_01463915.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115366304|gb|EAU65311.1| threonyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 372

 Score = 43.7 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 71/248 (28%), Gaps = 11/248 (4%)

Query: 214 LLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELV 273
            L +   D+   F     +  E      S  +        +         A   G + L 
Sbjct: 113 RLRQFTQDDGHIFCMEEQVADEVAAFCRSLRAFYRGFGFEDAQVAFSSRPAQRAGDDALW 172

Query: 274 VISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR 333
             +E           +        G  Y      E IL      + Q   +        R
Sbjct: 173 DRAEAALLEAAGRVGLDCRMQPGEGAFYG--PKLEFILKDRSGRDWQCGTIQLDFVLPER 230

Query: 334 YD-----GLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
           +D         + +   +    F      L + L+  +           V +  +   +D
Sbjct: 231 FDLHYVDSGGEKRRPAMLHRAIFGSVERFLGILLEHHQGVLPAWLAPEQVRVLPVG--AD 288

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           S +      + L  AG+R E      +    ++  A +   P A++ G  E++   +QI+
Sbjct: 289 SHAYAAEVQEHLLAAGLRVE-ADARGETLSRRILEAHQDAVPFAVLVGPREQAGRSIQIR 347

Query: 449 DLAKGKEL 456
           +   G + 
Sbjct: 348 E-RGGAQR 354



 Score = 43.7 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 9/71 (12%), Positives = 25/71 (35%), Gaps = 2/71 (2%)

Query: 15 FADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ 74
                +   +   + + +R    + G+  + TP +     + +          G+F L 
Sbjct: 1  MVFWHPRGFVLYQLLEERVRRELASGGYREVRTPQV-LGQRIWESSGHWQNFRHGMFVL- 58

Query: 75 DDDGQWISLRY 85
          DD  +  +++ 
Sbjct: 59 DDGERPFAMKP 69


>gi|39969493|ref|XP_366137.1| hypothetical protein MGG_10357 [Magnaporthe oryzae 70-15]
 gi|145015163|gb|EDJ99731.1| hypothetical protein MGG_10357 [Magnaporthe oryzae 70-15]
          Length = 566

 Score = 43.7 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
           +K     + L+ AG+R E  +        +  + + +  PL +  G  + ++  +     
Sbjct: 373 AKLDELNKTLKDAGVRVESDMRDGYTPAWKFNHWELKGVPLRLEFGPKDAAKDQVAFARR 432

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
             G++ S  I +  +            + EL+ T++K + +  +
Sbjct: 433 DTGEKGSIAIADLAT-----------KVPELLETIQKAMYDKAD 465


>gi|237801015|ref|ZP_04589476.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023872|gb|EGI03929.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 640

 Score = 43.7 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFT- 318

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
            + + +  +++        +   +   +                 +              
Sbjct: 319 TESENRDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLNAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|153217652|ref|ZP_01951333.1| threonyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124113402|gb|EAY32222.1| threonyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 159

 Score = 43.7 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 1/100 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             ++             Q L+  GIRA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 61  VVVNITDKQADYAHEVAQKLQKCGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDQEM 119

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
               + ++          ++ +  +  +A +A   + + E
Sbjct: 120 EADEIAVRTRKGKDLGKFKLDDFIAHIQAEIASRKLNLEE 159


>gi|161484944|ref|NP_615128.2| pyrolysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|118573258|sp|Q8TUB8|PYLS_METAC RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
          Length = 443

 Score = 43.7 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 7/133 (5%)

Query: 28  RILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDED-RPNKGVFSLQDDDGQWISLRYD 86
           ++   I   + + GF  I++P+L  ++ + +   + D   +K VF   D +     LR  
Sbjct: 234 KLEREITKFFVDRGFLEIKSPILIPAEYVERMGINSDTELSKQVFR-IDKN---FCLRPM 289

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAE 146
           L   L  Y+ +    +  P + + IGP +R E  G     +F    ++     +      
Sbjct: 290 LAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTM--LNFCQMGSGCTREN 347

Query: 147 MCMMMADTLEAVG 159
           +  ++ + L  +G
Sbjct: 348 LEAIITEFLNHLG 360


>gi|157129126|ref|XP_001655300.1| hypothetical protein AaeL_AAEL011352 [Aedes aegypti]
 gi|108872341|gb|EAT36566.1| conserved hypothetical protein [Aedes aegypti]
          Length = 322

 Score = 43.7 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 75/270 (27%), Gaps = 42/270 (15%)

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
           L  + E  +     L            E +   +  RK  +          ++  L    
Sbjct: 69  LGENCELRLDHGTWLSCSYFVNPTTSTEFMYKLQRQRKIWWMRYACDPGRYLISDLRQDA 128

Query: 304 GCVYEAILGFPVMNEKQKPVVFGSVG----GGGRYDGLVSRFKGQNVPATGFSIGISRLI 359
               +++       E++  +    +        + D  + +    +   T   + I +  
Sbjct: 129 DSKVQSVAIKARFAEEEVALEQLELIPGSVMREQMDDFLVKVGKSSRKITPNVLRIRQCA 188

Query: 360 VA------LKSLE------SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML----RTA 403
                   L + E         +         I  +  D+  L + +   + L    R A
Sbjct: 189 ELATLEVILDAFESAGTDSVRIHRKLAPYKCGIVCVSDDATQLEELRDLAKHLSNVLRKA 248

Query: 404 GIRA-EMFLGSS---KNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
            I   +    +    ++   QL++ D    P  ++        G+ Q++           
Sbjct: 249 NITTLDCSTQNGTSERSLNKQLRHLDSIAVPYTLLLRDQSLQNGLFQLRSRDT------- 301

Query: 460 IKNNESWREARVAQITIPISELVSTVKKIL 489
                          TI IS+L + + KI+
Sbjct: 302 -----------TLNETIHISDLPNYLLKII 320


>gi|19386908|gb|AAL87030.1|AF332624_1 threonyl-tRNA-synthetase [Azotobacter vinelandii]
          Length = 461

 Score = 43.7 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 35/112 (31%), Gaps = 3/112 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  I+TP +     L +         + +F+ 
Sbjct: 82  GMVFWHPNGWTVYQVLEQYMRAVQRENGYLEIKTPQVVDR-VLWEKSGHWANYAENMFTT 140

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
           + +  +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 141 ESES-RDYAIKPMNCPCHVQVYNQGLKSYRELPLRLAEFGACHRNEPSGALH 191



 Score = 37.1 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 4/88 (4%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+             + L   G RA+  L  ++  G +++       P  ++ G  E 
Sbjct: 363 VIMNITDKQGEFALEVERTLNQGGFRAKCDL-RNEKIGFKIREHTLLKVPYLLVIGDREV 421

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWRE 468
               + ++     + +       E +RE
Sbjct: 422 ETHSVAVR---TREGVDLGTMPVEQFRE 446


>gi|226360355|ref|YP_002778133.1| glycyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226238840|dbj|BAH49188.1| glycyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 468

 Score = 43.7 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 26/91 (28%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      E     +   G + +  D    P  I      
Sbjct: 377 VLPLSRNADLTPKAKDLAATLRQH-WNVEFD--DAGAIGRRYRRQDEIGTPFCITVDFDT 433

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++     +    +   E +   R
Sbjct: 434 LEDHAVTVRERDSMAQERVALDQVEGYLAQR 464


>gi|332561221|ref|ZP_08415539.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacter
           sphaeroides WS8N]
 gi|332275019|gb|EGJ20335.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacter
           sphaeroides WS8N]
          Length = 365

 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 106/360 (29%), Gaps = 45/360 (12%)

Query: 38  ENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAE 97
           +  G  P+E  +L  + +L     ++ R     +   D     + LR D T P+ +    
Sbjct: 18  QAAGALPVEADILLPAGTLLDLYGEDIRARA--YVTSDPLRGEMMLRPDFTVPVVQA--- 72

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL-- 155
           +      P R   +G VFR ++H   R  +++Q   +    +   A       +   L  
Sbjct: 73  HMAEGAEPARYTYMGEVFRRQEHAGPRASEYLQVGFELFDRTEPEAADAEVFALIAELLA 132

Query: 156 --------EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI---------VLR 198
                     +GI            K    +L  +      +                LR
Sbjct: 133 PLGLQAATGDIGILMAAVRGLSTTEKRKAALLRHVWRPTRFRALLDRFAGRTPVPEARLR 192

Query: 199 AIDKL----------DKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +D+L                G++     E R     +  + A L +E+  ++   LS++
Sbjct: 193 LLDRLAGASAGALMEAAGPAIGLREPCEIEARAAALIEDAEAAPLGAEEAAVLDDLLSLE 252

Query: 248 LE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                ++  L  L +   A E            +   G    R+   ++  +        
Sbjct: 253 APAAAALGRLEALARRMPALEPSVARFGRRLAALAARGIAVERLPFDASHGQSSLE---- 308

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                    V +          V  GGRYD L +             +    L+  LK L
Sbjct: 309 ----YYDGFVFSFHAADAGLPPVSTGGRYDALTAVLGQGRSIPAIGGVIRPGLVARLKGL 364


>gi|327293177|ref|XP_003231285.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326466401|gb|EGD91854.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 526

 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 12/120 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I N+++  +R  Y+ YGF  + TP + Y  SL +           ++ +
Sbjct: 79  GSPLFRPNGTHILNKLITFLRAQYKQYGFREVLTPNI-YKQSLWEVSGHWQNYKDDMYEV 137

Query: 74  ----------QDDDGQWISLRYDLTAP-LARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
                     +  + +   L+          + ++       P R     P+ RNE  G 
Sbjct: 138 GGRGDTGDTGETSENEIYGLKPMNCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGS 197


>gi|258653602|ref|YP_003202758.1| threonyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258556827|gb|ACV79769.1| threonyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 699

 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 5/91 (5%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +  +  V I   D   D L   Q     L   GIRAE      +    +++   
Sbjct: 569 GAFPAWLSPVQVVGIPVADAFGDYL---QDVVDQLVARGIRAEADHSDDR-MQKKIRTHT 624

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKEL 456
               P  ++ G  + + G +  +    G ++
Sbjct: 625 TAKVPFLLLAGEKDVAAGAVSFR-FRDGTQI 654


>gi|77465549|ref|YP_355052.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|77389967|gb|ABA81151.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacter
           sphaeroides 2.4.1]
          Length = 365

 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 106/360 (29%), Gaps = 45/360 (12%)

Query: 38  ENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAE 97
           +  G  P+E  +L  + +L     ++ R     +   D     + LR D T P+ +    
Sbjct: 18  QAAGALPVEADILLPAGTLLDLYGEDIRARA--YVTSDPLRGEMMLRPDFTVPVVQA--- 72

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL-- 155
           +      P R   +G VFR ++H   R  +++Q   +    +   A       +   L  
Sbjct: 73  HMAEGAEPARYTYMGEVFRRQEHAGPRASEYLQVGFELFDRTEPEAADAEVFALIAELLA 132

Query: 156 --------EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI---------VLR 198
                     +GI            K    +L  +      +                LR
Sbjct: 133 PLGLQAATGDIGILMAAVRGLSTTEKRKAALLRHVWRPTRFRALLDRFAGRTPVPEARLR 192

Query: 199 AIDKL----------DKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +D+L                G++     E R     +  + A L +E+  ++   LS++
Sbjct: 193 LLDRLAGASAVALMEAAGPAIGLREPCEIEARAAALIEDAEAAPLGAEEAAVLDDLLSLE 252

Query: 248 LE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                ++  L  L +   A E            +   G    R+   ++  +        
Sbjct: 253 APAAAALGRLEALARRMPALEPSVARFGRRLAALAARGIAVERLPFDASHGQSSLE---- 308

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                    V +          V  GGRYD L +             +    L+  LK L
Sbjct: 309 ----YYDGFVFSFHAADAGLPPVSTGGRYDALTAVLGQGRSIPAIGGVIRPGLVARLKGL 364


>gi|110639855|ref|YP_680065.1| glycyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110282536|gb|ABG60722.1| glycyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 504

 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 67/290 (23%), Gaps = 24/290 (8%)

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +     +      ++  F   G ++       ++  ++ K   L +E+          D 
Sbjct: 233 RQFTFRMREFEQMEMQFFIRPGTEMEWYNKWKESRLNWHKAIGLPAEK------LKFHDH 286

Query: 249 EKSMHELYELVKGTIAGEKGFNELV--VISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           EK  H     V        GF E+           + +     K        ++  TG  
Sbjct: 287 EKLAHYANAAVDIEFEFPFGFKEMEGIHSRTDFDLANHQELSKKKQQYFDNDIDPVTGKA 346

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE 366
           +   + F V         F +V     Y    +  + +                  + + 
Sbjct: 347 FGNYVPFVVETSVGADRCFLAVLC-NAYTEETTVEQTEEGEKVK------------ERVY 393

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
              +         I  +        K       L    I+         + G +    D 
Sbjct: 394 LKLHPTLAPIKAAILPITKKDGLPEKAMEIYNEL-KYDIKVT--YEDKDSIGKRYTRNDL 450

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              P  I           + I+      +    I           +  TI
Sbjct: 451 IGTPFCIAVDHQTLEDNTVTIRHRDTTLQERVPISELRLKIRKETSWRTI 500


>gi|255306517|ref|ZP_05350688.1| putative ATP phosphoribosyltransferase regulatory subunit
           [Clostridium difficile ATCC 43255]
          Length = 314

 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 112/293 (38%), Gaps = 31/293 (10%)

Query: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
            + R ++   I  ++ +  +  IE  L E  D       +   P + +  +   +G+ + 
Sbjct: 13  SKKRYKLKREIDKLFLDEEYFQIEPQLFEEYDEFTTI--NNKIPEESMVKVV--NGKVMV 68

Query: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142
           LR D+T  + + +           + +    +++N+       ++  Q   + +G ++  
Sbjct: 69  LRADITTSIIKSLVSR-WEDGLKLKLFYNSSIYKNKNT--VGIKEIRQIGCEYLGEASVE 125

Query: 143 ADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDK 202
           AD E+  +    LE      N++ + + + K + G+LE++                    
Sbjct: 126 ADREVVKLALKILEKYN---NNFILEVGSSKYIHGLLEEL-------------------N 163

Query: 203 LDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE-KSMHELYELVKG 261
           L+K     +K LL    T     + +   +  E  +++ + LS+     ++ E       
Sbjct: 164 LNKNCENQIKNLLYTKNTHELKVYIEELKIKREVKELLSNILSLQGNLYNVIEKSNKFYC 223

Query: 262 TIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
               ++   EL  ++ L+ +  +  ++ +   +++  L+YY G ++       
Sbjct: 224 NNKMKQALEELKQVNNLIEECNF-LDKARFDLSMITMLDYYEGIMFRGYYPNS 275


>gi|224542127|ref|ZP_03682666.1| hypothetical protein CATMIT_01302 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524964|gb|EEF94069.1| hypothetical protein CATMIT_01302 [Catenibacterium mitsuokai DSM
           15897]
          Length = 458

 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 25/251 (9%), Positives = 61/251 (24%), Gaps = 24/251 (9%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
            +F+    E    EL    K     E          + +   G N   ++      + L 
Sbjct: 207 GNFIFRTREFEQMELEFFTKPNEDLEWFEKWRHDCMQFLYDLGINKENLRYRDHDQKELS 266

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGR----------YDGLVSRFKGQNVPATG 350
           +Y+    +    +P    +   +   +    GR          Y    +  K        
Sbjct: 267 FYSKATTDIEYLYPFGWGELWGIADRTDYDLGRHQEYSKKNLEYLDPDTHEKYLPYVIEP 326

Query: 351 FSIGISRLIVALKSL-----------ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399
                   +  L                  +    + PV +  +        +       
Sbjct: 327 SVGADRLFLSVLADAFEEQKLENGDVRKVMHFHPALAPVKVAVLPLTKKQSDEAMELYND 386

Query: 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSRE 459
           L       E     +   G + +  D    PL +           + +++    +++   
Sbjct: 387 L-VKDFYCE--YDQAGQIGKRYRRQDAIGTPLCVTVDFDTAEDHSVTVRNRDTMEQIRLP 443

Query: 460 IKNNESWREAR 470
           I   +++   +
Sbjct: 444 IDQLKAYIADK 454


>gi|158319516|ref|YP_001512023.1| prolyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|166980096|sp|A8MLB3|SYP_ALKOO RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|158139715|gb|ABW18027.1| prolyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 480

 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 19/128 (14%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              I     V++    H    L K       L+    R E+    + + G +    + + 
Sbjct: 287 PPGIAPTQVVIVPVASHKEGVLDKANELRDRLKDK-FRVELDDRDNYSPGWKFNEWEMKG 345

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            P+ I  G  +       +                  +R   + +  + + +L   V+K+
Sbjct: 346 VPIRIEIGPRDIENNQAML------------------FRRDELEKDAVSLDDLEEAVEKL 387

Query: 489 LQENKEEI 496
           L++    +
Sbjct: 388 LEDINNNL 395


>gi|94985816|ref|YP_605180.1| glycyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|122986565|sp|Q1IXM3|SYG_DEIGD RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|94556097|gb|ABF46011.1| glycyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 504

 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 28/91 (30%), Gaps = 8/91 (8%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ-------GTGE 439
            +  S  +     L++ G+   +    S N G   +  D    P  +         G   
Sbjct: 413 EEITSVAKAIKAKLQSLGLG-RVLYEDSGNIGKAYRRHDEVGTPYCVTVDFETVGKGEDP 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + ++D     +    I    +W +AR
Sbjct: 472 ALTDTVTVRDRDTLGQERVRISELANWLQAR 502


>gi|255024220|ref|ZP_05296206.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 279

 Score = 43.7 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G      K   IR  I   I +  E  G++ + TP++   +   K     D  + G+F
Sbjct: 221 GLPLWLPKGATIRRVIERYIVDKEERLGYNHVYTPIMANVELY-KTSGHWDHYDDGMF 277


>gi|154295615|ref|XP_001548242.1| hypothetical protein BC1G_13078 [Botryotinia fuckeliana B05.10]
 gi|150843958|gb|EDN19151.1| hypothetical protein BC1G_13078 [Botryotinia fuckeliana B05.10]
          Length = 442

 Score = 43.7 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 26  RNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD-------- 77
              + + +   Y ++GF+ + TP + Y  SL +     +   + ++S+            
Sbjct: 2   FKALTEFLSAQYSHFGFEEVITPTI-YKKSLWEKSGHWENYAEDMYSVVGRGASGETIGG 60

Query: 78  ----GQWISLRYDLTAPLARYVAENFDTI-VFPCRTYRIGPVFRNEKHG 121
                +   L+           A    +    P R     P+ RNE  G
Sbjct: 61  QKGENEEYGLKPMNCPGHCLIFASKQRSYREMPVRYTDFSPLHRNEISG 109



 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 31/115 (26%), Gaps = 16/115 (13%)

Query: 347 PATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG-- 404
                      + + ++              V+I T++   + +S        L   G  
Sbjct: 271 HRAILGSVERMMALLIEHYNGHWPFWLNPSKVIILTVNDSEEVVSYANRVKMQL-GQGAY 329

Query: 405 ------------IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
                       +  E+   S ++   ++  A R+     I+ G        + +
Sbjct: 330 HDSWPKSRHSIEVPIELD-DSPRSVKKKISEAKRKRFGAIIVIGNKNVENNTVTV 383


>gi|218884312|ref|YP_002428694.1| prolyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765928|gb|ACL11327.1| prolyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 479

 Score = 43.7 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 75/239 (31%), Gaps = 16/239 (6%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNS---NRIKISSTIVRGLEYYTGCVYE 308
           +  + E++    A     +      +++   G      NR+++   IV+   + T    E
Sbjct: 153 ILRVREIMGFIEAHTAHHSREEAEKQIIEAIGIYKEFFNRLQLPYFIVKTPPWDTFAGAE 212

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGR---------YDGLVSRFKGQNVPATGFSIGISRLI 359
               F  +    K +  GSV   G+         +       K       G S  +   +
Sbjct: 213 YNYDFITVMPDGKGLELGSVINLGQKFAGAFEIKFMDTDGEEKYVYQTCYGVSERVLGAV 272

Query: 360 VALKSLESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
           + +   E       E+ P+ +  +      + + L        ML + G+R  +      
Sbjct: 273 IGIHGDEVGLFFPPEIAPIQVVIVPIMKPGEKEILEYALKIGSMLESHGLRVFIDSDLEH 332

Query: 416 NFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             G +  Y + +  P  I  G  E     + I    K ++    ++          ++I
Sbjct: 333 TPGWKYYYWEMKGVPTRIEVGAREVETSTVTIARRDKREKQVVRLEEVLETLRKIWSEI 391


>gi|156102126|ref|XP_001616756.1| glycine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148805630|gb|EDL47029.1| glycine-tRNA ligase, putative [Plasmodium vivax]
          Length = 842

 Score = 43.7 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 39/108 (36%), Gaps = 6/108 (5%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQ 435
             + T+ ++   +   +    +L    I +++   SS + G   KYA  D    P A+  
Sbjct: 727 CSVLTISNNKTFVPFVKQIQMILNEISISSKID-TSSVSIGK--KYARTDEIGIPFAVTI 783

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
                    + +++     ++   +        A + Q     +ELV+
Sbjct: 784 DFQTLKDKTVTLRERDSMLQVRLGLSELPGAVTALLRQKK-TWAELVA 830


>gi|111018230|ref|YP_701202.1| glycyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110817760|gb|ABG93044.1| glycine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 463

 Score = 43.7 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 26/91 (28%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      E     +   G + +  D    P  I      
Sbjct: 372 VLPLSRNADLTPKAKDLAATLRQH-WNVEFD--DAGAIGRRYRRQDEIGTPFCITVDFDT 428

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++     +    +   E +   R
Sbjct: 429 LEDHAVTVRERDSMAQERVALDQVEGYLAQR 459


>gi|225351462|ref|ZP_03742485.1| hypothetical protein BIFPSEUDO_03057 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157806|gb|EEG71089.1| hypothetical protein BIFPSEUDO_03057 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 491

 Score = 43.7 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 10/97 (10%), Positives = 28/97 (28%), Gaps = 2/97 (2%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  +        LR       +    +   G + +  D    PL I      
Sbjct: 370 VLPLSKKPELQTVAHDLAADLRQHDW--MIDYDEAGAIGRRYRREDEIGTPLCITVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
                + I++    ++    +     +  AR+ +  +
Sbjct: 428 LDDQAVTIRERDTMQQERVALDKVADYVAARIGEKHV 464


>gi|323136734|ref|ZP_08071815.1| tRNA synthetase class II (G H P and S) [Methylocystis sp. ATCC
           49242]
 gi|322398051|gb|EFY00572.1| tRNA synthetase class II (G H P and S) [Methylocystis sp. ATCC
           49242]
          Length = 382

 Score = 43.7 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 59/170 (34%), Gaps = 4/170 (2%)

Query: 29  ILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88
           IL +I   +E+ GF   E  LL+ +        ++ R    ++   D  G    LR + T
Sbjct: 17  ILAAILGHFEHEGFSRREPKLLQPAGVFLDRSGEDFRGR--LYLTSDASGAEFCLRPEYT 74

Query: 89  APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMC 148
            P+      +             G +FR  +HG     +F+Q  +++ G     A     
Sbjct: 75  IPVCLDYLASG-AAGKVAAYAYGGSIFRAPEHGAAGDGEFLQAGIESFGRDDREAADAEI 133

Query: 149 MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR 198
           M  A      G       + I +  ++   L+++ L    +        R
Sbjct: 134 MGAALEAAKAGG-AGPLAVHIGDAGLVAAFLDRLDLPSVWRRRIEAGHAR 182


>gi|329929336|ref|ZP_08283089.1| proline--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328936705|gb|EGG33148.1| proline--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 485

 Score = 43.7 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 31/80 (38%)

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + L++AGIR  +        G +    + R  P+ +  G  +   G+  +     G+
Sbjct: 317 ELFRELKSAGIRVRVDDNPDVRPGWKFNEYEMRGVPVRLEIGPRDMENGVCVLVSRITGE 376

Query: 455 ELSREIKNNESWREARVAQI 474
           +   E  N     ++ + Q+
Sbjct: 377 KKVVEQANLIQEVQSMLEQV 396


>gi|325971777|ref|YP_004247968.1| glycyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027015|gb|ADY13774.1| glycyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 443

 Score = 43.7 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 26/239 (10%), Positives = 67/239 (28%), Gaps = 34/239 (14%)

Query: 269 FNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSV 328
           ++++ +  + +R   +  + +   +     +++     ++ + G     +          
Sbjct: 223 YHKMGIKPQSLRWHQHGPDELAFYAKDAYDIQFLFPMGWQELEGVHSRTDYDLTQHQTFS 282

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL------KSLE-------SSTNNIKEM 375
           G    Y    S  +         +     +++AL      + LE          +     
Sbjct: 283 GKEMTYLDPESNERYIPYVVETSAGLTRNVLMALGDAYDEEELEGGDVRTVLHFHPSLAP 342

Query: 376 GPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ 435
             V +  +                LR        F   S   G + +  D    P  +  
Sbjct: 343 VTVAVLPLVKKDGIAEFASKLEHELRD-DFST--FYDVSGAIGRRYRRMDEIGTPYCVTV 399

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
                    + ++                      + Q+ + I++LV+T+KK  +E K 
Sbjct: 400 DYQSLEDQTVTLR------------------LRDSMEQVRVAITDLVATIKKATKEYKR 440


>gi|307256244|ref|ZP_07538030.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865263|gb|EFM97160.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 643

 Score = 43.7 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 46/346 (13%), Positives = 90/346 (26%), Gaps = 16/346 (4%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G + +   +E        +N +        G  Y     +       
Sbjct: 416 IQVKLSTRPENRIGDDAMWDRAEDGLAKALTANGLSYEIQEGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    +       G      V+   G+  P       +G     + + + E +    
Sbjct: 476 REWQCG-TIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ---LKYADRRN 428
             + P     M+         Q  T+ L  AGIRA+  L + K  F  +   L+      
Sbjct: 535 TWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRR----- 589

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            P  ++ G  E   G + ++     K         + + E    Q+
Sbjct: 590 VPYMLVCGDKEIEAGKVSVR---TRKGADLGTFTIDEFVEILKNQV 632


>gi|288803216|ref|ZP_06408650.1| glycine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334257|gb|EFC72698.1| glycine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 515

 Score = 43.7 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 20/243 (8%), Positives = 59/243 (24%), Gaps = 17/243 (6%)

Query: 250 KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEA 309
           K      +       G    +E     +  + + Y +    I   +     +       +
Sbjct: 280 KWFEYWKKHRLAWHEGLGMGDENYRFHDHEKLAHYANAATDIEFHM--PFGFKEVEGIHS 337

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE--- 366
              F +   ++            R +         ++      + +       ++LE   
Sbjct: 338 RTNFDLSQHEKYSGRQVKYFDPERNENYTPYVVETSIGVDRMFLSVMCHSYTEEALENGS 397

Query: 367 ----SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                            +  + +      K Q     L          + +  + G + +
Sbjct: 398 SRVVLKLPEPLAPVKCAVLPLVNKDGLPEKAQEIVNSL---KFHFNTHMEAKDSIGKRYR 454

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELV 482
             D    P  +       +   + ++     K+    ++      E R     + I+ L+
Sbjct: 455 RQDAIGTPFCVTVDGDTLTDNTVTLRYRDSMKQERVPVEKLREIIEDR-----VSITALL 509

Query: 483 STV 485
             +
Sbjct: 510 KKI 512


>gi|227524393|ref|ZP_03954442.1| prolyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088624|gb|EEI23936.1| prolyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 569

 Score = 43.7 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 3/102 (2%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDS-LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                          V +  ++   +  ++      + L   GI   +     +  G + 
Sbjct: 458 DENGLVWPVAVAPYTVHVIPINVKKEVQMNLANQIEEQLTENGIEVLVDDRRER-PGVKF 516

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             +D    PL I  G      G+++IK    G+ +  +++  
Sbjct: 517 ADSDLLGIPLRITVGKK-ADEGIVEIKIRKNGETVESKVEEL 557



 Score = 43.3 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 23/76 (30%), Gaps = 1/76 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           ++  G         R+  +I   +R   E      +  P +  ++ L K     +     
Sbjct: 34  QISAGMYAYLPLAYRVLTKIETIVRQEMEKTSAHEMLMPDVLPAE-LWKESGRYETYGPE 92

Query: 70  VFSLQDDDGQWISLRY 85
           +F  ++       L  
Sbjct: 93  LFKFKNRHDTDFILGP 108


>gi|78188687|ref|YP_379025.1| prolyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|114152180|sp|Q3ASP3|SYP_CHLCH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|78170886|gb|ABB27982.1| prolyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 481

 Score = 43.7 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 64/253 (25%), Gaps = 28/253 (11%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    + V      +       +   S   +          EA+
Sbjct: 156 WQEGHTAHATHEEAQEEVLRMINVYKTFAEEYMALPVILGKKSDSEKFAGALETFCIEAM 215

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G            +  K             +RLI AL        
Sbjct: 216 MQDGKALQAGTSHDLGQNFAKAFDCKFQTHEKTLEYVWATSWGVSTRLIGALIMAHSDDR 275

Query: 366 ESSTNNIKEMGPVLITTM--DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                       V+I  +        L         L  AGI A +      + G +   
Sbjct: 276 GLVLPPRLATRQVVIIPILKGDKESVLHHADNIAAALTKAGISAFVDSSEQNSPGWKFAE 335

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  PL +  G  +   GM  +      ++    + +                  LV 
Sbjct: 336 YELQGIPLRLELGPRDIKNGMCVVARRDTLEKTEIALDDR-----------------LVM 378

Query: 484 TVKKILQENKEEI 496
           ++ +IL + ++++
Sbjct: 379 SINEILNDIQQDM 391


>gi|85059397|ref|YP_455099.1| threonyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123738953|sp|Q2NT31|SYT_SODGM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|84779917|dbj|BAE74694.1| threonyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 642

 Score = 43.7 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 93/348 (26%), Gaps = 10/348 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               A+ +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E  + +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQVRDEVNNCIKMVYDMYGTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G N++   +E    +    N I        G  Y     +  +    
Sbjct: 416 ILVKLSTRPEKRIGSNDVWGRAEQDLAAALTENGIAFEYQPGEGAFYGPKIEFTLLDCLD 475

Query: 315 VMNEKQKPVVFGSVGGG--GRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
              +     +  S+ G     Y G  +      +        + R I  L    +     
Sbjct: 476 RAWQCGTVQLDFSLPGRLNASYVGENNERVVPVMIHRAILGSMERFIGILTEEYAGFYP- 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P  +  M+   +        T+ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLVPTQVVVMNITDNQSEYVAKLTEKLSAAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           ++ G  E     + +     KDL          K     R   + Q+ 
Sbjct: 594 LVCGDKEVEACKVAVRTRRGKDLGSIDVNEIITKLQHEIRSRNLHQLE 641



 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 51/203 (25%), Gaps = 11/203 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          +   +   +R   + Y +  ++ P       L +     D  
Sbjct: 256 MQEEAP-GMVFWHNDGWTLFRELETFVRMKLKAYQYQEVKGP-FMMDRVLWEKTGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 AEHMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   + + +             +      + IL K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQVRDEVNNCI--------KMVYDMYGTFGFEKILVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKLDKFGLQ 209
           + ++    +  RA   L     +
Sbjct: 425 EKRIGSNDVWGRAEQDLAAALTE 447


>gi|254693779|ref|ZP_05155607.1| threonyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261214058|ref|ZP_05928339.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
 gi|260915665|gb|EEX82526.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
          Length = 658

 Score = 43.7 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 60/193 (31%), Gaps = 18/193 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   ++  +R   +++G+  + TP +    SL +           +F +
Sbjct: 265 GVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQV-LDKSLWETSGHWGWYRDNMFKV 323

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGRFR 126
                  DD +  +L+        +   ++        P +    G V R E  G     
Sbjct: 324 TVAGDDTDDDRVFALKPMNCPGHVQIF-KHGLKSYRDLPIKLAEFGNVHRYEPSGALH-- 380

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                    +     T D        + + A  +  ND  + +      + I  K+    
Sbjct: 381 -------GLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRP 433

Query: 187 DDKLNERLIVLRA 199
           + ++    +  RA
Sbjct: 434 EKRVGSDELWDRA 446



 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV-----I 275
           D++  F     + +E + I    LS+  +    E+   +        G +EL       +
Sbjct: 391 DDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVM 450

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             ++ +    SN IK       G  Y     +E  L   +  E Q            R+ 
Sbjct: 451 MTVLEQIRQQSNNIKTGILPGEGAFYG--PKFEYTLKDAIGREWQCGTTQVDFNLPERFG 508

Query: 336 GLV-----SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                    + +   +           L + +++             V++ T+  D+D  
Sbjct: 509 AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATITSDADEY 568

Query: 391 SK---------YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +K                LR   I    +     +             P+ ++ G  E  
Sbjct: 569 AKEAAAKLKAAGLQVVTDLRNEKIN---YKVREHSLQK---------VPVILVCGKREAE 616

Query: 442 RGMLQIKDLAKGKELSREIKN 462
              + ++ L    + S  +  
Sbjct: 617 EKTVNMRRLGSRDQESMTLDE 637


>gi|256820371|ref|YP_003141650.1| prolyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581954|gb|ACU93089.1| prolyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 492

 Score = 43.7 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 70/247 (28%), Gaps = 27/247 (10%)

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                      A E+    + V ++ V           + S   R          EA++ 
Sbjct: 173 EGHTAHATKAEAIEEAQKMMNVYADFVENFMAVPVIKGVKSESERFAGADDTYCIEALMQ 232

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLES 367
                +       G           VS+   Q           +RL+ AL          
Sbjct: 233 DGKALQAGTSHFLGQNFAKAFDVKYVSKEGKQEYVWASSWGVSTRLMGALIMTHSDDNGL 292

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKY----QMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                     V+I  +   ++ L K     Q   + L+   I  +     +++ G +   
Sbjct: 293 VLPPKLAPIQVVIVPIYKGAEQLEKVRSHIQPLIEELKKHNISVKFDDRDTQSPGFKFHE 352

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  P+ +  G  +      ++                   R   + + T+   ++V+
Sbjct: 353 YELKGIPVRLAVGQRDIEHNTFEV------------------ARRDTLTKETVAGDQIVA 394

Query: 484 TVKKILQ 490
            ++++L+
Sbjct: 395 HIQQLLE 401


>gi|261407942|ref|YP_003244183.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261284405|gb|ACX66376.1| prolyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 485

 Score = 43.7 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 31/80 (38%)

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + L++AGIR  +        G +    + R  P+ +  G  +   G+  +     G+
Sbjct: 317 ELFRELKSAGIRVRVDDNPDVRPGWKFNEYEMRGVPVRLEIGPRDMENGVCVLVSRITGE 376

Query: 455 ELSREIKNNESWREARVAQI 474
           +   E  N     ++ + Q+
Sbjct: 377 KKVVEQANLIQEVQSMLEQV 396


>gi|298372789|ref|ZP_06982779.1| glycine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275693|gb|EFI17244.1| glycine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 516

 Score = 43.7 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/267 (7%), Positives = 56/267 (20%), Gaps = 22/267 (8%)

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           G    +E +     F   + E+   + +      +     +    +        G    R
Sbjct: 246 GKAFRNEIVARQFIFRMREFEQMEMQFFVRPGEEMKWFDYWKHFRMRWHRSLGLGDGKYR 305

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFP----VMNEKQKPVVFGSVGGGGR--YDGLVSRFK 342
                 +       T   +E   GF     + +     +       G    Y        
Sbjct: 306 FHDHEKLAHYANAATDIEFEMPFGFKEVEGIHSRTDFDLSQHEKYSGKNIKYFDPELNES 365

Query: 343 GQNVPATGFSIGISRLIVAL----KSLES---------STNNIKEMGPVLITTMDHDSDS 389
                           +  +    +  +              +     V +  +      
Sbjct: 366 YVPYVIETSIGVDRMFLSIMAASYEEQQLEGGDSRVVLHLPPVLAPNKVAVLPLVKKDGL 425

Query: 390 LSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKD 449
             K      ML     +         + G + +  D    P  +           + I+ 
Sbjct: 426 PQKAAEVMNML-KFDFKT--VYDEKDSIGKRYRRQDAVGTPFCVTIDHQTLEDDTVTIRH 482

Query: 450 LAKGKELSREIKNNESWREARVAQITI 476
               ++    + +        V+  ++
Sbjct: 483 RDSMEQSRVPVGSLHGIVNDNVSLRSV 509


>gi|221060322|ref|XP_002260806.1| glycyl-tRNA synthetase [Plasmodium knowlesi strain H]
 gi|193810880|emb|CAQ42778.1| glycyl-tRNA synthetase, putative [Plasmodium knowlesi strain H]
          Length = 830

 Score = 43.7 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 37/114 (32%), Gaps = 5/114 (4%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
           +    S           + T+ +    +   +    +L    I +++   SS + G   K
Sbjct: 700 ERHYLSLPYTLAPIKCSVLTISNHKTFIPFVKQVQMILNEFSISSKID-NSSVSIGK--K 756

Query: 423 YA--DRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           YA  D    P A+           + +++     ++  ++ +      + + Q 
Sbjct: 757 YARTDEIGIPFAVTIDFQTLKDKTVTLRERDSMLQVRIDLSDLVEIVTSLLRQK 810


>gi|325911837|ref|ZP_08174241.1| proline--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476343|gb|EGC79505.1| proline--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 566

 Score = 43.7 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +    I    EN     +  P    + +L +      +    +F L
Sbjct: 38  GVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 97  KDRHGRESLLGP 108



 Score = 38.3 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 19/82 (23%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++   ++  G +   AD    P+ II G    S  ++++K     ++ S E+        
Sbjct: 504 LYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVK--KSTEQESVEM-------- 552

Query: 469 ARVAQITIPISELVSTVKKILQ 490
                    +  L   + K L+
Sbjct: 553 --------SLDSLTEYISKELR 566


>gi|312871363|ref|ZP_07731459.1| proline--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872484|ref|ZP_07732553.1| proline--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312873339|ref|ZP_07733392.1| proline--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091129|gb|EFQ49520.1| proline--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092066|gb|EFQ50441.1| proline--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093115|gb|EFQ51463.1| proline--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 566

 Score = 43.7 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +    I    EN     +  P    + +L +      +    +F L
Sbjct: 38  GVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 97  KDRHGRESLLGP 108



 Score = 38.3 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 19/82 (23%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++   ++  G +   AD    P+ II G    S  ++++K     ++ S E+        
Sbjct: 504 LYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVK--KSTEQESVEM-------- 552

Query: 469 ARVAQITIPISELVSTVKKILQ 490
                    +  L   + K L+
Sbjct: 553 --------SLDSLTEYISKELR 566


>gi|217979642|ref|YP_002363789.1| threonyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217505018|gb|ACK52427.1| threonyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 648

 Score = 43.7 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 7/150 (4%)

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLI 380
            P  FG+       D        + +    F        + ++    +         V++
Sbjct: 493 MPGRFGAFYIDADSDKKTPVMIHRAI----FGSLERFTGILIEHFSGNLPLWLAPVQVIV 548

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
            T+  D+D            R  G+R E  L  ++    +++       P+ I+ G  E 
Sbjct: 549 ATITQDAD--DYALEVAAAARKYGLRVEADL-RNEKISYKIREHSLAKTPVLIVVGKREG 605

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREAR 470
               + I+ L      S  ++         
Sbjct: 606 LERTVSIRRLGASDTTSLSLETALERLADE 635



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 29/91 (31%), Gaps = 2/91 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   +   ++  +R   E  G+  + TP +    +L +         + +F  + +D
Sbjct: 266 WHPKGWTLFQTLIAYMRRRMEADGYLEVNTPQV-LDRALWETSGHWQTFREHMFLTKTED 324

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
            +  +L+        +   +N          
Sbjct: 325 ERIFALKPMNCPGHVQIF-KNGLKSYRDLPL 354


>gi|238606802|ref|XP_002396812.1| hypothetical protein MPER_02873 [Moniliophthora perniciosa FA553]
 gi|215470062|gb|EEB97742.1| hypothetical protein MPER_02873 [Moniliophthora perniciosa FA553]
          Length = 222

 Score = 43.7 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 57/172 (33%), Gaps = 21/172 (12%)

Query: 327 SVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHD 386
             G G  Y    S             +      + L    +S   +     + + T D  
Sbjct: 18  PTGQGKLYVWQNSWGLSTRTIGVMVMVHGDNQGLVLPPRVASVQVVVVPCGITVKTTDEQ 77

Query: 387 SDSLSKYQ-MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS-RGM 444
              +++        L+ AGI+A+  L      G +    +++  PL +  G  +   R  
Sbjct: 78  RAQINQACDELAATLKKAGIKAKADLRDGYTPGYKFNDWEQKGVPLRLEIGPKDLEGRQT 137

Query: 445 LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
           L ++    G++                    + +  + S++++IL   ++++
Sbjct: 138 LSVR-RDTGEKKP------------------VSLDNIASSIREILDSIQQQM 170


>gi|27904622|ref|NP_777748.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29839437|sp|P59554|SYT_BUCBP RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|27904019|gb|AAO26853.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 643

 Score = 43.7 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 89/319 (27%), Gaps = 13/319 (4%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           + +     D+       +++  V     +Y I   N      I   +     D       
Sbjct: 299 MMNKKIWKDSGHLDNYKESMFMVCSSNFEYGIKPMNCPGHVQIFNHVVRSYRDLPIRISE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F +   + SE  + +     I       ++
Sbjct: 359 FGSCHRNEPSGALHGL-MRIRNFTQDDAHIFCREDQICSEVSNCIRMVYEIYKIFGFKKI 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPV 315
              +        G + +   +E    +    ++I+       G  Y           F  
Sbjct: 418 LVRLSTRPKNRIGNDNIWDKAENDLATSLRESKIEFEYQHGEGAFYGPKIELSL---FDS 474

Query: 316 MNEKQKPVVFGSVGG------GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
           +    +                   D    R     V           + + ++    + 
Sbjct: 475 LGRVWQCATIQLDFCLPINLKAFYIDHNNERKVPIIVHRAVLGSIERFIGILIEEYIGNF 534

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
                + P+ +   + +S+ L   ++  +     GIR+E+    ++    +++    R  
Sbjct: 535 PTW--LAPIQVVLANVNSNHLQYIKLLYKEFYALGIRSEID-SRNETISYKIREHIARKI 591

Query: 430 PLAIIQGTGERSRGMLQIK 448
           P  II G  E     + ++
Sbjct: 592 PYIIICGDKEVKNNTITLR 610



 Score = 37.1 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 1/58 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF 71
           G          +   +   IR     Y +  ++TP++       K     D   + +F
Sbjct: 263 GMIFWHRNGWIVFQELKKLIRVKLRKYNYQEVKTPVMMNKKI-WKDSGHLDNYKESMF 319


>gi|303236784|ref|ZP_07323363.1| anticodon binding domain protein [Prevotella disiens FB035-09AN]
 gi|302482952|gb|EFL45968.1| anticodon binding domain protein [Prevotella disiens FB035-09AN]
          Length = 231

 Score = 43.7 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 17/225 (7%), Positives = 47/225 (20%), Gaps = 24/225 (10%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGF--------------PVMNE 318
                     G  +   +                 E  + F               +   
Sbjct: 3   KYRLAWHEALGMGNENYRYHDHEKLAHYANAATDIEFRMPFGFKEVEGIHSRTNFDLSQH 62

Query: 319 KQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE-------SSTNN 371
           ++            R +  V      ++      + +       + LE            
Sbjct: 63  EKFSGRQMKYFDPERNENYVPYVVETSIGVDRMFLTVMCHSYTEEQLENGSSRVVLRLPE 122

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  + +      K Q     L        +      + G + +  D    P 
Sbjct: 123 PLAPVKCAVLPLVNKDGLPEKAQEIVDDL-KFHFNTTIEAKD--SIGKRYRRQDAIGTPF 179

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
            +       +   + ++     +++   I       E RV+  ++
Sbjct: 180 CVTVDGDSLTDNSVTLRYRDSMEQVRVPIAKLREIIEDRVSITSV 224


>gi|326503454|dbj|BAJ86233.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326506156|dbj|BAJ91317.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 518

 Score = 43.7 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 49/164 (29%), Gaps = 11/164 (6%)

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD----SL 390
           +        QN  A         ++                  V++  +           
Sbjct: 280 EKGERSMVWQNSWAYTTRSIGVMVMTHGDDKGLVLPPKVAPIQVIVIPVPFKDADTTAIK 339

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +     L  AGIRA++    + + G +    + +  PL I  G  + +   ++I   
Sbjct: 340 GACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRR 399

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
             G ++     +          Q+ + +  + + + +  +  ++
Sbjct: 400 DNGAKVDIPSTDLVE-------QVRVLLDGIQANLLETAKAKRD 436


>gi|302191444|ref|ZP_07267698.1| prolyl-tRNA synthetase [Lactobacillus iners AB-1]
          Length = 566

 Score = 43.7 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +    I    EN     +  P    + +L +      +    +F L
Sbjct: 38  GVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 97  KDRHGRESLLGP 108



 Score = 38.3 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 19/82 (23%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++   ++  G +   AD    P+ II G    S  ++++K     ++ S E+        
Sbjct: 504 LYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVK--KSTEQESVEM-------- 552

Query: 469 ARVAQITIPISELVSTVKKILQ 490
                    +  L   + K L+
Sbjct: 553 --------SLDSLTEYISKELR 566


>gi|260754807|ref|ZP_05867155.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|260758029|ref|ZP_05870377.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260761852|ref|ZP_05874195.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|297248387|ref|ZP_06932105.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260668347|gb|EEX55287.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260672284|gb|EEX59105.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674915|gb|EEX61736.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|297175556|gb|EFH34903.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 660

 Score = 43.7 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 60/193 (31%), Gaps = 18/193 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   ++  +R   +++G+  + TP +    SL +           +F +
Sbjct: 267 GVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQV-LDKSLWETSGHWGWYRDNMFKV 325

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGRFR 126
                  DD +  +L+        +   ++        P +    G V R E  G     
Sbjct: 326 TVAGDDTDDDRVFALKPMNCPGHVQIF-KHGLKSYRDLPIKLAEFGNVHRYEPSGALH-- 382

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                    +     T D        + + A  +  ND  + +      + I  K+    
Sbjct: 383 -------GLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRP 435

Query: 187 DDKLNERLIVLRA 199
           + ++    +  RA
Sbjct: 436 EKRVGSDELWDRA 448



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV-----I 275
           D++  F     + +E + I    LS+  +    E+   +        G +EL       +
Sbjct: 393 DDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVM 452

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             ++ +    SN IK       G  Y     +E  L   +  E Q            R+ 
Sbjct: 453 MTVLEQIRQQSNNIKTGILPGEGAFYG--PKFEYTLKDAIGREWQCGTTQVDFNLPERFG 510

Query: 336 GLV-----SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                    + +   +           L + +++             V++ T+  D+D  
Sbjct: 511 AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATITSDADEY 570

Query: 391 SK---------YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +K                LR   I    +     +             P+ ++ G  E  
Sbjct: 571 AKEAAAKLKAAGLQVVTDLRNEKIN---YKVREHSLQK---------VPVILVCGKREAE 618

Query: 442 RGMLQIKDLAKGKELSREIKN 462
              + ++ L    + S  +  
Sbjct: 619 EKTVNMRRLGSRDQESMTLDE 639


>gi|193214675|ref|YP_001995874.1| glycyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193088152|gb|ACF13427.1| glycyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 486

 Score = 43.7 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 7/78 (8%), Positives = 25/78 (32%), Gaps = 3/78 (3%)

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            Q   + L+    + +     + + G + +  D    P            G + ++D   
Sbjct: 409 AQKLQKELQKQ-FKVQ--YDDAGSIGKRYRRQDEIGTPYCFTIDHDTLQDGTVTVRDRDT 465

Query: 453 GKELSREIKNNESWREAR 470
            ++    +   +++   +
Sbjct: 466 TEQSRIALDQVKAFLSEK 483


>gi|118602649|ref|YP_903864.1| threonyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166225495|sp|A1AWT6|SYT_RUTMC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|118567588|gb|ABL02393.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
          Length = 632

 Score = 43.7 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 33/343 (9%), Positives = 89/343 (25%), Gaps = 7/343 (2%)

Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIG 168
           + +  +      G  +   + +     +   +    +       DT+     +  DY + 
Sbjct: 270 WTLCQLIEQYMRGIFKDNDYQEVHTPQLIDKSLWEKSGHWEKFGDTMFTTSSENRDYAVK 329

Query: 169 INNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTK 228
             N      I  +      D                   L G+ + +     D+   F  
Sbjct: 330 PMNCPAHIQIYNQGLKSYRDLPLRLAEFGSCHRNEPSGTLHGI-MRVRNFVQDDGHIFCT 388

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
              +  E    +    ++       ++   +        G +E+   +E       ++  
Sbjct: 389 PEQIQVEVSTFIDLTFAVYKHFGFDKVDIKLSTRPENHVGSDEVWDKAEAALAEALDAKV 448

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQN 345
           IK       G  Y     +          +                   D    +     
Sbjct: 449 IKWEFQKGEGAFYGPKIEFVLKDCLERQWQCGTLQVDFSMPERLDAQFIDENNIKQTPVV 508

Query: 346 VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGI 405
           +           + + ++  E +      + P+    ++            T+ L+  G+
Sbjct: 509 LHRAILGSLERFVGILIEHYEGAYPCW--LTPIQAVVINISGKQADFVIDITKKLKKQGL 566

Query: 406 RAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           R    L  ++  G +++    +  P  +I G  E  +  + ++
Sbjct: 567 RVISDL-RNEKIGFKIREHSLQRYPYILIVGDREMEKDQISVR 608


>gi|62289987|ref|YP_221780.1| threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699915|ref|YP_414489.1| threonyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024229|ref|YP_001934997.1| threonyl-tRNA synthetase [Brucella abortus S19]
 gi|254689295|ref|ZP_05152549.1| threonyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254697431|ref|ZP_05159259.1| threonyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730329|ref|ZP_05188907.1| threonyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256257545|ref|ZP_05463081.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260545263|ref|ZP_05821004.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260883825|ref|ZP_05895439.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|73919775|sp|Q57D65|SYT_BRUAB RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|123740930|sp|Q2YQ07|SYT_BRUA2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238689368|sp|B2S5S6|SYT_BRUA1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|62196119|gb|AAX74419.1| ThrS, threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82616016|emb|CAJ11049.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase,
           class IIa:Threonyl-tRNA synthetase, class IIa:TGS
           domain:A [Brucella melitensis biovar Abortus 2308]
 gi|189019801|gb|ACD72523.1| threonyl-tRNA synthetase [Brucella abortus S19]
 gi|260096670|gb|EEW80545.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260873353|gb|EEX80422.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
          Length = 658

 Score = 43.7 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 60/193 (31%), Gaps = 18/193 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   ++  +R   +++G+  + TP +    SL +           +F +
Sbjct: 265 GVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQV-LDKSLWETSGHWGWYRDNMFKV 323

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGRFR 126
                  DD +  +L+        +   ++        P +    G V R E  G     
Sbjct: 324 TVAGDDTDDDRVFALKPMNCPGHVQIF-KHGLKSYRDLPIKLAEFGNVHRYEPSGALH-- 380

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                    +     T D        + + A  +  ND  + +      + I  K+    
Sbjct: 381 -------GLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRP 433

Query: 187 DDKLNERLIVLRA 199
           + ++    +  RA
Sbjct: 434 EKRVGSDELWDRA 446



 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV-----I 275
           D++  F     + +E + I    LS+  +    E+   +        G +EL       +
Sbjct: 391 DDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVM 450

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             ++ +    SN IK       G  Y     +E  L   +  E Q            R+ 
Sbjct: 451 MTVLEQIRQQSNNIKTGILPGEGAFYG--PKFEYTLKDAIGREWQCGTTQVDFNLPERFG 508

Query: 336 GLV-----SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                    + +   +           L + +++             V++ T+  D+D  
Sbjct: 509 AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATITSDADEY 568

Query: 391 SK---------YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +K                LR   I    +     +             P+ ++ G  E  
Sbjct: 569 AKEAAAKLKAAGLQVVTDLRNEKIN---YKVREHSLQK---------VPVILVCGKREAE 616

Query: 442 RGMLQIKDLAKGKELSREIKN 462
              + ++ L    + S  +  
Sbjct: 617 EKTVNMRRLGSRDQESMTLDE 637


>gi|226944147|ref|YP_002799220.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259516344|sp|C1DF42|SYT_AZOVD RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|226719074|gb|ACO78245.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 640

 Score = 43.7 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 35/142 (24%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  I+TP +     L +         + +F+ 
Sbjct: 261 GMVFWHPNGWTVYQVLEQYMRAVQRENGYLEIKTPQVVDR-VLWEKSGHWANYAENMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVYNQGLKSYRELPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEEQMQAESAAFI 400



 Score = 36.7 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 4/88 (4%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+             + L   G RA+  L  ++  G +++       P  ++ G  E 
Sbjct: 542 VIMNITDKQGEFALEVERTLNQGGFRAKCDL-RNEKIGFKIREHTLLKVPYLLVIGDREV 600

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWRE 468
               + ++     + +       E +RE
Sbjct: 601 ETHSVAVR---TREGVDLGTMPVEQFRE 625


>gi|325913484|ref|ZP_08175850.1| proline--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477253|gb|EGC80399.1| proline--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 566

 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +    I    EN     +  P    + +L +      +    +F L
Sbjct: 38  GVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 97  KDRHGRESLLGP 108



 Score = 38.3 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 19/82 (23%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++   ++  G +   AD    P+ II G    S  ++++K     ++ S E+        
Sbjct: 504 LYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVK--KSTEQESVEM-------- 552

Query: 469 ARVAQITIPISELVSTVKKILQ 490
                    +  L   + K L+
Sbjct: 553 --------SLDSLTEYISKELR 566


>gi|290980470|ref|XP_002672955.1| predicted protein [Naegleria gruberi]
 gi|284086535|gb|EFC40211.1| predicted protein [Naegleria gruberi]
          Length = 673

 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 18/52 (34%)

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
              S+ + G + K AD    P+AI           + I+      +   E+ 
Sbjct: 605 HDESAHSIGKKYKRADEIGIPIAITIDEESLLNATVTIRFRDTCLQERVELS 656


>gi|223939080|ref|ZP_03630964.1| prolyl-tRNA synthetase [bacterium Ellin514]
 gi|223892240|gb|EEF58717.1| prolyl-tRNA synthetase [bacterium Ellin514]
          Length = 576

 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   ++   +R      G   +  P ++  +   K        ++  F +
Sbjct: 38  GLYTFMPLGLRALRKVEQIVREEMNRAGALELLMPAMQPPEIWEKS-GRYVTASEVFFKV 96

Query: 74  QDDDGQWISLRY 85
           +D   +   L  
Sbjct: 97  RDRAKKEWILGP 108



 Score = 41.7 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
           +   S ++   +     L   GI   +     +  G + K ++    P+ +  G    ++
Sbjct: 488 VAAGSATMVLAEKIYSELVAQGIDVILDDRDER-PGVKFKDSELVGFPIRLGIGEKSLAK 546

Query: 443 GMLQIK 448
           G +++K
Sbjct: 547 GEVELK 552


>gi|83814713|ref|YP_446435.1| glycyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83756107|gb|ABC44220.1| glycyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 512

 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 14/228 (6%), Positives = 44/228 (19%), Gaps = 6/228 (2%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            ++   + +E +    +  +              +     +             ++   Y
Sbjct: 288 WKERRMKWHESLGIDPSNLRFHEH---DQLSHYANAAVDIQYDFPIGWKELEGIHSRTDY 344

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +         +K              Y    S    + +            +        
Sbjct: 345 DLSRHEEYSGKKMSYYDPWEEERYTPYVVETSTGLDRTLFMVLCDAYYEEEVKGDTRSVL 404

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             +         I  +          +     L               + G + +  D  
Sbjct: 405 QFHPEVAPVRAGIFPLTDKEGLPDIAREIEDDL-NQHFNVR--YDDRGSMGKRYRRQDEA 461

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             P  I           + ++D    ++    I    ++   + A   
Sbjct: 462 GTPFCITVDFDTLDDQTVTVRDRDTMEQDRVAIDQLATYIFDQTANWE 509


>gi|329919866|ref|ZP_08276804.1| proline--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|328936956|gb|EGG33386.1| proline--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 566

 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +    I    EN     +  P    + +L +      +    +F L
Sbjct: 38  GVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 97  KDRHGRESLLGP 108



 Score = 38.3 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 19/82 (23%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++   ++  G +   AD    P+ II G    S  ++++K     ++ S E+        
Sbjct: 504 LYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVK--KSTEQESVEM-------- 552

Query: 469 ARVAQITIPISELVSTVKKILQ 490
                    +  L   + K L+
Sbjct: 553 --------SLDSLTEYISKELR 566


>gi|312212761|emb|CBX92844.1| similar to prolyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 610

 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 25/59 (42%)

Query: 405 IRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           I   +     K+ G +L+ AD    P+ ++ G   R RG ++++    G +    +   
Sbjct: 541 IDTILDDRPGKSLGWKLRDADLIGYPVVVVVGRAWRERGEVEVQCRRLGVKRDVSVSEV 599


>gi|238063301|ref|ZP_04608010.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885112|gb|EEP73940.1| prolyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 468

 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 39/135 (28%), Gaps = 15/135 (11%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
                         +  +                LR AG+R  +   +   FG +   A+
Sbjct: 277 GLRVPPRLAPVQAYVMVVKAGDGVGEAAAKLCDALRDAGVRVALDDRTDTPFGRRAVDAE 336

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN--------NESWREARVAQ---- 473
            R  P+ +  G  + + G   +     G +    + +         E+ + A   Q    
Sbjct: 337 LRGYPVRVEVGPRDLAAGNAVVVRRTDGSKSPTPVADVVGAVLAALETDQRALHDQALAH 396

Query: 474 ---ITIPISELVSTV 485
               T+ ++ L   +
Sbjct: 397 RESRTVQVATLAEAI 411


>gi|271963873|ref|YP_003338069.1| anticodon binding domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270507048|gb|ACZ85326.1| anticodon binding domain protein [Streptosporangium roseum DSM
           43021]
          Length = 461

 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 27/92 (29%), Gaps = 3/92 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  ++D   K +     LR      E     +   G + +  D    P  I    
Sbjct: 369 VAVLPLSRNADLSPKAKDLAAQLRRR-WNVEFD--DAGAIGRRYRRQDEIGTPFCITVDF 425

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                  + I++     +    +   E++   
Sbjct: 426 DTLDDQAVTIRERDSMAQERVALDQVEAYLRQ 457


>gi|167764216|ref|ZP_02436343.1| hypothetical protein BACSTE_02601 [Bacteroides stercoris ATCC
           43183]
 gi|167698332|gb|EDS14911.1| hypothetical protein BACSTE_02601 [Bacteroides stercoris ATCC
           43183]
          Length = 513

 Score = 43.7 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 15/235 (6%), Positives = 48/235 (20%), Gaps = 29/235 (12%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               +  +  G+  +  +                 E ++ F     +             
Sbjct: 287 ETRLKWHKALGFGDDHYRYHDHDKLAHYANAATDIEFLMPFGFKEVEGIHSRTNFDLSQH 346

Query: 333 --------RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL----- 379
                   +Y    +                   +  + +             V+     
Sbjct: 347 EKFSGKNIKYFDPETNESYTPYVIETSIGVDRMFLSIMSASYCEEQLENGETRVVLKLPA 406

Query: 380 --------ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPL 431
                   +  +        K +     L               + G + +  D    P 
Sbjct: 407 ALAPVKLAVMPLVKKDGLPEKAREIINDL---KFHFHCQYDEKDSIGKRYRRQDAIGTPY 463

Query: 432 AIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVK 486
            +           + +++    ++    I    +    R     + I+ L+ T++
Sbjct: 464 CVTVDHQTLEDNCVTLRNRDTMQQERVAISELNNIIADR-----VSITSLLKTLQ 513


>gi|116491012|ref|YP_810556.1| prolyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122276806|sp|Q04F81|SYP_OENOB RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|116091737|gb|ABJ56891.1| Prolyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 570

 Score = 43.7 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI N+I   IR        + +  P +  ++ L K           ++ L
Sbjct: 38  GIYAYLPLANRIINKIESIIREEMNRIDANEMLMPEMIPAE-LWKESGRFYTYGPQMYQL 96

Query: 74  QDDDGQWISLRY 85
           +D   +   +  
Sbjct: 97  KDRHDREFIMAP 108


>gi|310287029|ref|YP_003938287.1| glycyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|311063902|ref|YP_003970627.1| blycyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|309250965|gb|ADO52713.1| glycyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|310866221|gb|ADP35590.1| GlyS Glycyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 506

 Score = 43.7 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 30/101 (29%), Gaps = 2/101 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  S        LR       +    +   G + +  D    PL I      
Sbjct: 370 VLPLSKKPELQSIAHDLAADLRQHEW--MIDYDEAGAIGRRYRREDEIGTPLCITVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
                + I++    ++    +     +  ARV++  +   E
Sbjct: 428 IDDQAVTIRERDTMQQERVALDKVADYVAARVSEKRVRYPE 468


>gi|315230490|ref|YP_004070926.1| prolyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183518|gb|ADT83703.1| prolyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 480

 Score = 43.7 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 30/253 (11%), Positives = 72/253 (28%), Gaps = 27/253 (10%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAIL 311
             E +         E+   E + I + + K       +       +    Y     E ++
Sbjct: 159 FFEAHTAHDSFEDAERQIKEDLEIFDNLAKKLALPYIVSKRPEWDKFPGAYYSLGAEVVM 218

Query: 312 GFPVMNEKQKPVVFGSVGGGGR---YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                 +      +           Y+      +  +    G S  +   ++A+   +  
Sbjct: 219 PDGRTLQIGTMHNYKQNFAKAYNIMYEKEDGTHEYVHQTTYGMSERLLAAVIAVHGDDRG 278

Query: 369 TNNIKEMGPVLITTMDHDS-----DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                 + P+ +  +         D  +  +   + L+TAGIR  +        G +   
Sbjct: 279 MVLPPTIAPIQVVIVPIPKKDSPYDVFAYAREIAEELKTAGIRVHVD-ERDIRPGRKFYD 337

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  PL I  G  +       +                   R   + + T+  +EL+ 
Sbjct: 338 WELKGVPLRIEVGPRDVEGQKAVL------------------ARRDTLEKFTVERAELIE 379

Query: 484 TVKKILQENKEEI 496
            V++ L    + +
Sbjct: 380 KVRETLDAIMDNL 392



 Score = 39.8 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 20/79 (25%), Gaps = 4/79 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
             +G        +RI   I   I    E  G   +  P L       K           V
Sbjct: 31  PVKGMNIWLPYGLRIMRNIEKFIHEEMERTGHQEVLFPALIPETEFQKEAEHIAGFEGEV 90

Query: 71  FSLQ----DDDGQWISLRY 85
           F +     D     + LR 
Sbjct: 91  FWVTHAGHDPLDVRLILRP 109


>gi|321460980|gb|EFX72016.1| hypothetical protein DAPPUDRAFT_227683 [Daphnia pulex]
          Length = 1566

 Score = 43.7 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 52/115 (45%), Gaps = 14/115 (12%)

Query: 384  DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRG 443
            +  ++ ++  Q Y ++L  AGIR +     + + G +  + + +  PL +  G  +  +G
Sbjct: 1370 EEKNNLMTACQEYEKVLSAAGIRVKGDYRDNYSPGWKFNHWELKGVPLRVEIGPRDVKQG 1429

Query: 444  M-LQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK-ILQENKEEI 496
              + ++     ++L++ + +               I  L+ T++K +L +  +E+
Sbjct: 1430 EYVAVR-RDTSEKLTKSMASAAG-----------DIKHLLDTIQKALLDKATQEL 1472


>gi|309804213|ref|ZP_07698290.1| proline--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|312875784|ref|ZP_07735776.1| proline--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|308163616|gb|EFO65886.1| proline--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|311088688|gb|EFQ47140.1| proline--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 566

 Score = 43.7 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +    I    EN     +  P    + +L +      +    +F L
Sbjct: 38  GVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 97  KDRHGRESLLGP 108



 Score = 37.9 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 19/82 (23%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++   ++  G +   AD    P+ II G    S  ++++K     ++ S E+        
Sbjct: 504 LYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVK--KSTEQESVEM-------- 552

Query: 469 ARVAQITIPISELVSTVKKILQ 490
                    +  L   + K L+
Sbjct: 553 --------SLDSLTEYISKELR 566


>gi|309799607|ref|ZP_07693832.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116758|gb|EFO54209.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 617

 Score = 43.7 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 54/216 (25%), Gaps = 11/216 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMRQEFDKMGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLAR----YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +     L    + T   + R       +    +      YR     RN       F 
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                       S +    E            G+               D          
Sbjct: 157 MKDGYSFHANYDSLDVTYDEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPA 216

Query: 187 DDKLNER---LIVLRAIDKLDKFGLQGVKLLLGEGR 219
              L+        + + D++     + +K  L +  
Sbjct: 217 RTDLDRWVVLDKSVASFDEIPDQVQEEIKAELLKWM 252



 Score = 37.9 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 34/102 (33%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D  SL+      + L   G        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEASLTLTNRIEEALVNKGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +   + +     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHVDSLLETLE 612


>gi|330958898|gb|EGH59158.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 640

 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 37.9 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 63/231 (27%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L++  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLAVYADFGFKDIELKLSTRPEKRVGSDELWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|317495322|ref|ZP_07953692.1| glycyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914744|gb|EFV36220.1| glycyl-tRNA synthetase [Gemella moribillum M424]
          Length = 457

 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 27/248 (10%), Positives = 71/248 (28%), Gaps = 20/248 (8%)

Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
           F + + E+   E + +    +   K + +       +   G     I++       L +Y
Sbjct: 211 FRTREFEQMELEFFCVPGTELDWHKAWKD--TCENWLLDLGMTKENIRLRDHDPEELSHY 268

Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVG----------GGGRYDGLVSRFKGQNVPATGFS 352
           +    +    FP    +   +   +                Y  L++  K          
Sbjct: 269 SNATTDIEFKFPFGWGELWGIASRTDYDLKQHMEHSGQDMTYQDLLTNEKYIPYCIEPSV 328

Query: 353 IGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAG------IR 406
                L+  L    +     +     ++      +   +     ++ L          + 
Sbjct: 329 GVDRVLLAFLCDAYNEEEVGENDTRTVLKFHPVLAPYKAAILPLSKKLSDKASEVYSQLA 388

Query: 407 AE--MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNE 464
           A+  +    + + G + +  D    P  I       + GM+ +++    ++    I   +
Sbjct: 389 ADFMVDFDETGSIGKRYRRQDEIGTPFCITYDFESENDGMVTVRERDTMEQTRIAISELK 448

Query: 465 SWREARVA 472
            + E RV 
Sbjct: 449 QYIEERVK 456


>gi|294508373|ref|YP_003572431.1| glycyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294344701|emb|CBH25479.1| glycyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 512

 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 14/228 (6%), Positives = 44/228 (19%), Gaps = 6/228 (2%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            ++   + +E +    +  +              +     +             ++   Y
Sbjct: 288 WKERRMKWHESLGIDPSNLRFHEH---DQLSHYANAAVDIQYDFPIGWKELEGIHSRTDY 344

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +         +K              Y    S    + +            +        
Sbjct: 345 DLSRHEEYSGKKMSYYDPWEEERYTPYVVETSTGLDRTLFMVLCDAYYEEEVKGDTRSVL 404

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
             +         I  +          +     L               + G + +  D  
Sbjct: 405 QFHPEVAPVRAGIFPLTDKEGLPDIAREIEDDL-NQHFNVR--YDDRGSMGKRYRRQDEA 461

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
             P  I           + ++D    ++    I    ++   + A   
Sbjct: 462 GTPFCITVDFDTLDDQTVTVRDRDTMEQDRVAIDQLATYIFDQTANWE 509


>gi|221369555|ref|YP_002520651.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacter
           sphaeroides KD131]
 gi|221162607|gb|ACM03578.1| ATP phosphoribosyltransferase regulatory subunit [Rhodobacter
           sphaeroides KD131]
          Length = 365

 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 107/360 (29%), Gaps = 45/360 (12%)

Query: 38  ENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAE 97
           +  G  P+E  +L  + +L     ++ R     +   D     + LR D T P+ +    
Sbjct: 18  QAAGALPVEADILLPAGTLLDLYGEDIRARA--YVTSDPLRGEMMLRPDFTVPVVQA--- 72

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTL-- 155
           +      P R   +G VFR ++H   R  +++Q   +    +   A       +   L  
Sbjct: 73  HMAEGAEPARYTYMGEVFRRQEHAGPRTSEYLQVGFELFDRTEPEAADAEVFALIAELLA 132

Query: 156 --------EAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI---------VLR 198
                     +GI            K    +L  +      +                LR
Sbjct: 133 PLGLQAATGDIGILMAAVRGLSTTEKRKAALLRHVWRPTRFRALLDRFAGRTPVPGARLR 192

Query: 199 AIDKL----------DKFGLQGVKLLLG-EGRTDNSGDFTKGANLTSEQIDIMVSFLSID 247
            +D+L                G++     E R     + ++ A L +E+  ++   LS++
Sbjct: 193 LLDRLAGASAGALMEAAGPAIGLREPCEIEARAAALIEDSEAAPLGAEEAAVLDDLLSLE 252

Query: 248 LE--KSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
                ++  L  L +   A E            +   G    R+   ++  +        
Sbjct: 253 APAAAALGRLEALARRMPALEPSVARFGRRLAALAARGIAVERLPFDASHGQSSLE---- 308

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
                    V +          V  GGRYD L +             +    L+  LK L
Sbjct: 309 ----YYDGFVFSFHAADAGLPPVSTGGRYDALTAVLGQGRSIPAIGGVIRPGLVARLKGL 364


>gi|330951866|gb|EGH52126.1| threonyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 640

 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|259501582|ref|ZP_05744484.1| proline-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|259167100|gb|EEW51595.1| proline-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 581

 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +  +    I    EN     +  P    + +L +      +    +F L
Sbjct: 53  GVYAYLPLAYLVLRKAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 111

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 112 KDRHGRESLLGP 123



 Score = 37.9 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 19/82 (23%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           ++   ++  G +   AD    P+ II G    S  ++++K     ++ S E+        
Sbjct: 519 LYDDRNERPGVKFNDADLIGAPIRIIVGRR-VSEQIVEVK--KSTEQESVEM-------- 567

Query: 469 ARVAQITIPISELVSTVKKILQ 490
                    +  L   + K L+
Sbjct: 568 --------SLDSLTEYISKELR 581


>gi|66045402|ref|YP_235243.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75502334|sp|Q4ZUG7|SYT_PSEU2 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|63256109|gb|AAY37205.1| Threonyl-tRNA synthetase, class IIa [Pseudomonas syringae pv.
           syringae B728a]
          Length = 640

 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|33152811|ref|NP_874164.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|71153574|sp|Q7VKR9|SYT_HAEDU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|33149036|gb|AAP96553.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 643

 Score = 43.7 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 43/350 (12%), Positives = 99/350 (28%), Gaps = 13/350 (3%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIESEVTACIKMVYDIYSTFGFTN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           ++  +        G +++   +E    +  ++N ++       G  Y     + A+    
Sbjct: 416 IFVKLSTRPDNRIGADDMWDRAEAGLSAALSANGLEYQIQHGEGAFYGPKIEF-ALRDCL 474

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
               +   V              V+    ++ P       +G     + + + E +    
Sbjct: 475 GREWQCGTVQLDFALPSRLDASYVTEDNSRHTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ---LKYADRRN 428
             + P+    M+         Q   + L  AG+R +  L + K  F  +   L+      
Sbjct: 535 VWLAPIQAVVMNITDSQADYVQQVVKQLSDAGLRVKADLRNEKVGFKVREHTLRR----- 589

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            P  ++ G  E + G + ++        +  I+      +A+V    + +
Sbjct: 590 VPYMLVCGDKEITEGKVSVRTRKGEDLGTFNIEAFVEMLKAQVKTRELKL 639



 Score = 37.9 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/192 (7%), Positives = 44/192 (22%), Gaps = 19/192 (9%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWERTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH------ 120
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 121 ----------GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGIN 170
                         F    Q + +         D        +    +  + ++     +
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIESEVTACIKMVYDIYSTFGFTNIFVKLSTRPDNRIGADD 432

Query: 171 NRKILDGILEKI 182
                +  L   
Sbjct: 433 MWDRAEAGLSAA 444


>gi|330943371|gb|EGH45740.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|315648100|ref|ZP_07901201.1| prolyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315276746|gb|EFU40089.1| prolyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 485

 Score = 43.3 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%)

Query: 395 MYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGK 454
              + L++AGIR  +        G +    + R  P+ +  G  +   G+  +     G+
Sbjct: 317 ELFRELKSAGIRVRVDDNPDVRPGWKFNEYEMRGVPVRLEIGPRDMENGVCVLVSRITGE 376

Query: 455 ELSREIKNNESWREARVAQI 474
           +   E  N     +  + Q+
Sbjct: 377 KKIVEQANLTQEVQNMLEQV 396


>gi|294055076|ref|YP_003548734.1| threonyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614409|gb|ADE54564.1| threonyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 612

 Score = 43.3 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 39/110 (35%), Gaps = 3/110 (2%)

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
             + +   +    F        V ++    +         V I  M+   D + + +   
Sbjct: 470 NEKHRPVMLHRAPFGSMERFCGVLIEHFAGNFPTWLAPEQVRILPMN--DDLVPQAREIE 527

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           ++ + A IR  +   + K  G +++       P  ++ G  E   G++++
Sbjct: 528 KLFKAAKIRVTVDAIADK-LGAKIRKCHVDKVPHFLVLGRKEAEDGLIKV 576


>gi|330973951|gb|EGH74017.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|289673298|ref|ZP_06494188.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
 gi|330898079|gb|EGH29498.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|71735831|ref|YP_274354.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|123747652|sp|Q48JS3|SYT_PSE14 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|71556384|gb|AAZ35595.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWERAETAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|330989241|gb|EGH87344.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAETAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|327405532|ref|YP_004346370.1| prolyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327321040|gb|AEA45532.1| prolyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 491

 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 57/231 (24%), Gaps = 15/231 (6%)

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
            FL  +   +     E +K T      + E                     +   R    
Sbjct: 167 EFLWQEGHTAHATKEEAIKETEQMLDVYAEFA------ETYMAMPVIKGHKTESERFAGA 220

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVA 361
                 E+++      +       G                             +RL+ A
Sbjct: 221 DDTYCIESMMQDGKALQAGTSHFLGQNFAKAFDVKYSDAQGKLEYVWATSWGVSTRLMGA 280

Query: 362 L-----KSLESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLG 412
           L                    V+I  +    + L          T  L+   ++ +    
Sbjct: 281 LIMTHSDDEGLVLPPALAPIQVVIVPIYRTDEELQLINDAVAKITAELKDLKVKVKYDSD 340

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
             K  G +    + +  P+ +  G  + + G+++I      ++ +  I N 
Sbjct: 341 DQKRPGWKFAEHEAKGVPVRLAIGPRDLANGVVEIARRDTKEKYAMNIDNI 391


>gi|320324302|gb|EFW80381.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320328576|gb|EFW84578.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330885566|gb|EGH19715.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAETAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|315612430|ref|ZP_07887343.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315411|gb|EFU63450.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 617

 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 35/310 (11%), Positives = 82/310 (26%), Gaps = 12/310 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLAR----YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +     L    + T   + R       +    +      YR     RN       F 
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                       S +    E            G+               D          
Sbjct: 157 MKDGYSFHANYDSLDVTYDEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPA 216

Query: 187 DDKLNER---LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
              L+        + + D++     + +K  L +       D    +  +S   ++ ++ 
Sbjct: 217 RTDLDRWVVLDKSVASFDEIPAEVQEEIKAELLKWMVSGE-DTIAYSTESSYAANLEMAT 275

Query: 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYT 303
                   +    E+++    G K  +E+     +  +    +        +V  L    
Sbjct: 276 NEYKPSNRVVAEEEVIRVETPGVKSIDEVAAFLNVPEEQTIKTLFYMADGELVVALLVGN 335

Query: 304 GCVYEAILGF 313
             + E  L  
Sbjct: 336 DQLNEVKLKN 345



 Score = 37.9 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +     N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLE 612


>gi|302187613|ref|ZP_07264286.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|289623636|ref|ZP_06456590.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647146|ref|ZP_06478489.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298486701|ref|ZP_07004758.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298158784|gb|EFH99847.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330867695|gb|EGH02404.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAETAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|257486172|ref|ZP_05640213.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331010502|gb|EGH90558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAETAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|147918785|ref|YP_687490.1| prolyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121690208|sp|Q0W0C9|SYP_UNCMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|110622886|emb|CAJ38164.1| prolyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 474

 Score = 43.3 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 24/261 (9%), Positives = 63/261 (24%), Gaps = 15/261 (5%)

Query: 248 LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY 307
            +++               +  +        +        R +               + 
Sbjct: 160 FKEAHTAHATWDDAEKQVHEAMDLYSEFFTKLAVPFIVHKRPEWDKFPGADYTMAFDTMM 219

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                   +          +      Y+      +  N    G S      ++ +     
Sbjct: 220 -PDGKSLQVGTVHHLGTKFAKTYDITYEDEKGERQYVNQTCYGISERCIAAVIGIHGDNK 278

Query: 368 STNNIKEMGPVLITTMDH-----DSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLK 422
                       +  +       D       Q   ++LR   I A +   + +  G +  
Sbjct: 279 GLVLPPNASQTQVVIIPIIFKKDDGGVKEACQKVKELLRANDIVAVID-DADERPGAKYY 337

Query: 423 YADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT-----IP 477
             + +  P  I  G  +     + +     GK+ S  +         ++ +         
Sbjct: 338 KWEMKGTPFRIEIGPRDIKNNSVML-VRRDGKKESIPMDGLPETVRNKLFEFQTDLLNAA 396

Query: 478 ISELVSTVK--KILQENKEEI 496
              +++ VK  + L E K++I
Sbjct: 397 RDSMLARVKACETLDEAKQQI 417


>gi|269958355|ref|YP_003328142.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848184|gb|ACZ48828.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 636

 Score = 43.3 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/255 (9%), Positives = 74/255 (29%), Gaps = 14/255 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              K   I   I + IR   E +G+  ++TP++     L +     ++  + +F ++ +D
Sbjct: 267 WHDKGWVIYRTIEEYIRCKLEKHGYLEVKTPIM-LDRKLWEKSGHWEKFKENMFVVE-ND 324

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            + ++++        +       +            +    +     +            
Sbjct: 325 KKELAIKPMNCPCHVQIFKSKIRSYKELPIRMAEFGMCHRNEPSGSLYGLMRVRGFTQDD 384

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +       ++   +    E +     D+              + + +   D+   R+   
Sbjct: 385 AHIFCTHEQVRDEVLRFYELLMEVYKDFG------------FDSVTVKLSDRPENRIGSD 432

Query: 198 RAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYE 257
              D+ ++  ++ +  L  +   +       G  L     D +         +    L +
Sbjct: 433 EIWDRSEQSLMEPMNALGVQYTINKGEGAFYGPKLEFTLKDSIGREWQCGTVQLDFVLPD 492

Query: 258 LVKGTIAGEKGFNEL 272
            +     GE G   +
Sbjct: 493 RLGAYYIGEDGKKHI 507



 Score = 37.1 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 32/322 (9%), Positives = 88/322 (27%), Gaps = 7/322 (2%)

Query: 136 VGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI 195
           +        +       + +  V   + +  I   N      I +       +       
Sbjct: 299 MLDRKLWEKSGHWEKFKENMFVVENDKKELAIKPMNCPCHVQIFKSKIRSYKELPIRMAE 358

Query: 196 VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL 255
                       L G+ + +     D++  F     +  E +      + +  +     +
Sbjct: 359 FGMCHRNEPSGSLYGL-MRVRGFTQDDAHIFCTHEQVRDEVLRFYELLMEVYKDFGFDSV 417

Query: 256 YELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY---EAILG 312
              +        G +E+   SE       N+  ++ +     G  Y     +   ++I  
Sbjct: 418 TVKLSDRPENRIGSDEIWDRSEQSLMEPMNALGVQYTINKGEGAFYGPKLEFTLKDSIGR 477

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                  Q   V     G         +     +           + + ++    +    
Sbjct: 478 EWQCGTVQLDFVLPDRLGAYYIGEDGKKHIPVIIHRAILGTIERFIGILIEHYAGNIPVW 537

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
                + I T+  + +  ++  M   +     +R E+     +N  ++++ A     P+ 
Sbjct: 538 LAPVQLEILTVSGEVEEYARGLMEMAL--QKNVRVELNSTE-ENISHKIRKAIFNKVPIV 594

Query: 433 IIQGTGERSRGMLQIKDLAKGK 454
            + G  E   G + ++    G+
Sbjct: 595 WVVGKSEAGDGCVSVRRYGSGE 616


>gi|227536433|ref|ZP_03966482.1| glycine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243809|gb|EEI93824.1| glycine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 489

 Score = 43.3 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 3/85 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I  +        K +     L       +     +   G + +  D    P  I      
Sbjct: 391 ILPLTKKDGLPEKAREIMAAL-KLDYNVQYDEKDA--IGKRYRRQDAIGTPFCITVDHQS 447

Query: 440 RSRGMLQIKDLAKGKELSREIKNNE 464
                + I+D    K+    I + E
Sbjct: 448 LEDNTVTIRDRDTMKQERVAIADLE 472


>gi|254462954|ref|ZP_05076370.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206679543|gb|EDZ44030.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 643

 Score = 43.3 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 55/179 (30%), Gaps = 9/179 (5%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 R+   ++  +R   +  G+  + TP +    +L +         + +F  Q  D
Sbjct: 270 WHPNGWRVFQTLIAYMRRRQDVAGYVEVNTPDIMDR-ALWETSGHWFNYKENMFLAQTQD 328

Query: 78  GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137
            +  +L+             +        R+YR  PV   E     R+          + 
Sbjct: 329 DRDYALKPMNCPG-------HMMVYNHSLRSYRDLPVKIAEFGKVHRYEPSGALH-GLLR 380

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV 196
             + T D        + L    +K ND  + I      + +  K+    ++++      
Sbjct: 381 VRSFTQDDAHIYCSPEQLTDECLKVNDLILSIYKDFGFEDVHVKLSTRPENRIGSDESW 439


>gi|170016989|ref|YP_001727908.1| prolyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|226701307|sp|B1MY62|SYP_LEUCK RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|169803846|gb|ACA82464.1| Prolyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 571

 Score = 43.3 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ N+I   IR   +    + +  P +  ++   K           ++  
Sbjct: 38  GTFSYLPMAKRVLNKIEQIIREEMDRIDANEMLVPEILPAELWQKS-GRYTTYGPNLYKF 96

Query: 74  QDDDGQWISLRY 85
           ++   +   L  
Sbjct: 97  KNRQDRDFILGP 108


>gi|165975675|ref|YP_001651268.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190149490|ref|YP_001968015.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303251658|ref|ZP_07337831.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307251749|ref|ZP_07533652.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307260677|ref|ZP_07542367.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307262809|ref|ZP_07544434.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|238687519|sp|B0BSM2|SYT_ACTPJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|238692375|sp|B3H061|SYT_ACTP7 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|165875776|gb|ABY68824.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|189914621|gb|ACE60873.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302649500|gb|EFL79683.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306860750|gb|EFM92760.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306869598|gb|EFN01385.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306871824|gb|EFN03543.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 643

 Score = 43.3 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 46/346 (13%), Positives = 90/346 (26%), Gaps = 16/346 (4%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G + +   +E        +N +        G  Y     +       
Sbjct: 416 IQVKLSTRPENRIGDDAMWDRAEDGLAKALTANGLSYEIQEGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    +       G      V+   G+  P       +G     + + + E +    
Sbjct: 476 REWQCG-TIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ---LKYADRRN 428
             + P     M+         Q  T+ L  AGIRA+  L + K  F  +   L+      
Sbjct: 535 TWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRR----- 589

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            P  ++ G  E   G + ++     K         + + E    Q+
Sbjct: 590 VPYMLVCGDKEIEAGKVSVR---TRKGADLGTFTIDEFVEILKNQV 632


>gi|332993607|gb|AEF03662.1| threonyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 638

 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 39/99 (39%), Gaps = 1/99 (1%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            +  ++         Q   + L+ +G RA+  L  ++  G +++    +  P  ++ G  
Sbjct: 541 QVVILNITDSQGEYAQECVKKLQKSGFRAKSDL-RNEKIGFKIREHTLKRVPYMLVVGDK 599

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIP 477
           E   G + ++  +        +++  +     VA+ TI 
Sbjct: 600 EMEAGEVAVRSRSGDDLGKMSLESFIAMANQEVAEKTIK 638



 Score = 37.9 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/107 (8%), Positives = 31/107 (28%), Gaps = 2/107 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   +   +R    +Y +D ++ PL+       K     ++  + +F+ 
Sbjct: 262 GMVFWHNDGWSIYTELEKFVREKLRDYTYDEVKGPLMMDRSLWEKS-GHWEKYAENMFT- 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
            + + +  +++        +   +   +                 + 
Sbjct: 320 TESEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEP 366


>gi|307249432|ref|ZP_07531421.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306858506|gb|EFM90573.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 643

 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 46/346 (13%), Positives = 90/346 (26%), Gaps = 16/346 (4%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G + +   +E        +N +        G  Y     +       
Sbjct: 416 IQVKLSTRPENRIGDDAMWDRAEDGLAKALTANGLSYEIQEGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    +       G      V+   G+  P       +G     + + + E +    
Sbjct: 476 REWQCG-TIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ---LKYADRRN 428
             + P     M+         Q  T+ L  AGIRA+  L + K  F  +   L+      
Sbjct: 535 TWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRR----- 589

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            P  ++ G  E   G + ++     K         + + E    Q+
Sbjct: 590 VPYMLVCGDKEIEAGKVSVR---TRKGADLGTFTIDEFVEILKNQV 632



 Score = 38.7 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/197 (8%), Positives = 52/197 (26%), Gaps = 11/197 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWERTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             I +      I  K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCI--------RMVYDIYSTFGFSNIQVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKL 203
           ++++ +  +  RA D L
Sbjct: 425 ENRIGDDAMWDRAEDGL 441


>gi|293363452|ref|ZP_06610209.1| threonine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552972|gb|EFF41725.1| threonine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 580

 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 9/98 (9%), Positives = 30/98 (30%), Gaps = 2/98 (2%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  +   L+  + +         V +  +  + ++    +   + L    IR ++ 
Sbjct: 458 IGTYERFVATLLEQTKGNLPFWLAPKQVTVIPVH-EINNYEYAKEVNEFLFANDIRTKLD 516

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
               +    +++ A        +I G  E+    +  +
Sbjct: 517 DREER-LSKKMREAQISKSKYQLILGDKEQESKTISYR 553



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        + I N I + +  + + YGF  + TP     ++L K           +F  
Sbjct: 200 GLPIWLEDGMAIHNEIKNLVLKMDKKYGFREVLTPHF-GEETLYKISGHLAHYKDDMFKP 258

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQ 127
              +G+ +  R  +T P       +        R+YR  P+  +E+    R+ +
Sbjct: 259 IVVEGERLIPRP-MTCP------HHIICYNMEKRSYRDLPIRYSEQSQLYRYEK 305


>gi|289177374|gb|ADC84620.1| Glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 638

 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 33/114 (28%), Gaps = 20/114 (17%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  S  Q   Q LR       +    S   G + +  D    PL I      
Sbjct: 517 VLPLSKKPELQSVAQDLAQDLRLNDW--MIDYDESGAIGRRYRRQDEIGTPLCITVDFDT 574

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                + I++                     + Q  + ++++   V K + + +
Sbjct: 575 LDDQAVTIRERDT------------------MQQERVALTQVADYVAKRINDKR 610


>gi|242309901|ref|ZP_04809056.1| prolyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523198|gb|EEQ63064.1| prolyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 578

 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 27/80 (33%), Gaps = 9/80 (11%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPI----ETPLLEYSDSLGKFLPDEDR 65
           ++  G  +      R+ ++I   ++   +N G + +     TP      SL +     +R
Sbjct: 34  QIGSGIYNFLPLGKRVLDKISKIVKQEMDNAGANEVLLGCVTPA-----SLWQASGRYER 88

Query: 66  PNKGVFSLQDDDGQWISLRY 85
             K +   +D          
Sbjct: 89  YGKELLRFKDRKENEFVFGP 108


>gi|219851699|ref|YP_002466131.1| glycyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545958|gb|ACL16408.1| glycyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 573

 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 46/418 (11%), Positives = 106/418 (25%), Gaps = 25/418 (5%)

Query: 83  LRYDLTAP--------LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
           LR + TA         L R+  +                +    + G  R R+F Q + +
Sbjct: 161 LRPE-TAQGIFTDFTRLLRFYRDKLPFGAVQIGKSYRNEIS--PRQGMIRLREFTQAEAE 217

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
                 +            T++ +G              + + + E    +        L
Sbjct: 218 IFVHPEQKKHPHFERYADYTMDLLGYPEQLACKPAVTISMAEAVAEGRIANEYVAYYIAL 277

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                     +      +  L +     + D      L+     +    ++   +  +  
Sbjct: 278 THQMLTRLGIRPDRLRFRQHLPDELAHYAEDCWDAEILSDRFGWVETVGIADRTDYDLKA 337

Query: 255 LYELVKGTIAGEKGFNEL--VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                  +      F+E+      ++V   G    R +  +  V      +    E +  
Sbjct: 338 HAAQSGDSFTVFIPFDEVKRESRRQIVADMGALGPRFRGKAKAVADAIANSTPTDEGVWV 397

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE------ 366
                +         V                  P+ G       ++      E      
Sbjct: 398 EVDGEQVLITPDLYKVREVEIEVRGEEVMPHVIEPSYGIDRICYAILENCFDEEEVDGEI 457

Query: 367 ---SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                 +       V +  + +  D  +     T  L+  G++AE     S   G + + 
Sbjct: 458 RAVLHLSPEVAPVQVAVFPLMNRDDLDTIAWDLTTTLKHLGVQAE--YDDSGAIGRRYRR 515

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
            D    P A+      R    + ++D    +++   +         R+   T+   E+
Sbjct: 516 QDEIGTPFAVTIDYDTREDQTVTLRDRDSMRQVRVPLGEVPELVR-RLTTRTLHFEEI 572


>gi|160941555|ref|ZP_02088887.1| hypothetical protein CLOBOL_06453 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435520|gb|EDP13287.1| hypothetical protein CLOBOL_06453 [Clostridium bolteae ATCC
           BAA-613]
          Length = 479

 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 43/158 (27%), Gaps = 7/158 (4%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                F     K   + F       +Y    S      +      +      + L     
Sbjct: 231 GTSHNFGDGFAKAFDIQFTDKDNTLKYVHQTSWGVSTRIIGAIIMVHGDDNGLVL----- 285

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I  +  +++         L K     + L  AG   ++   + K+ G +    + R
Sbjct: 286 -PPRIAPVQIMVVPVQQQKEGVLDKAYELKERLTKAGYAVKVD-DTDKSPGWKFADCEMR 343

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
             PL +  G  +  +    +      ++    +   E+
Sbjct: 344 GVPLRVEIGPKDIEKNQAVLVRRDNHEKSFVSLDELEA 381


>gi|17987198|ref|NP_539832.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|256044731|ref|ZP_05447635.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564073|ref|ZP_05834559.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265991152|ref|ZP_06103709.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|22654120|sp|Q8YH89|SYT_BRUME RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|17982868|gb|AAL52096.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260154089|gb|EEW89181.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263001936|gb|EEZ14511.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 658

 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 45/150 (30%), Gaps = 10/150 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   ++  +R   +++G+  + TP +    SL +           +F +
Sbjct: 265 GVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQV-LDKSLWETSGHWGWYRDNMFKV 323

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGP-GRF 125
                  DD +  +L+        +   ++        P +    G V R E  G     
Sbjct: 324 TVAGDDTDDDRVFALKPMNCPGHVQIF-KHGLKSYRDLPIKLAEFGNVHRYEPSGALHGL 382

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTL 155
            +      D+              +  + L
Sbjct: 383 MRVRGFTQDDAHIFCTEEQMAAECLQINDL 412



 Score = 40.2 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV-----I 275
           D++  F     + +E + I    LS+  +    E+   +        G +EL       +
Sbjct: 391 DDAHIFCTEEQMAAECLQINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVM 450

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             ++ +    SN IK       G  Y     +E  L   +  E Q            R+ 
Sbjct: 451 MTVLEQIRQQSNNIKTGILPGEGAFYG--PKFEYTLKDAIGREWQCGTTQVDFNLPERFG 508

Query: 336 GLV-----SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                    + +   +           L + +++             V++ T+  D+D  
Sbjct: 509 AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATITSDADEY 568

Query: 391 SK---------YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +K                LR   I    +     +             P+ ++ G  E  
Sbjct: 569 AKEAAAKLKAAGLQVVTDLRNEKIN---YKVREHSLQK---------VPVILVCGKREAE 616

Query: 442 RGMLQIKDLAKGKELSREIKN 462
              + ++ L    + S  +  
Sbjct: 617 EKTVNMRRLGSRDQESMTLDE 637


>gi|84514321|ref|ZP_01001685.1| ATP phosphoribosyltransferase regulatory subunit [Loktanella
           vestfoldensis SKA53]
 gi|84511372|gb|EAQ07825.1| ATP phosphoribosyltransferase regulatory subunit [Loktanella
           vestfoldensis SKA53]
          Length = 359

 Score = 43.3 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 98/334 (29%), Gaps = 45/334 (13%)

Query: 31  DSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90
             +R+ +   G   ++  +L+ +D L     D+ R     +   D     + LR D T P
Sbjct: 12  RRLRDHFAAQGAVVVKADVLQPADLLLDLYGDDIRARA--YLTADPLRGEMVLRPDFTVP 69

Query: 91  LARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMM 150
           +   V  + +T   P R    G VFR ++    R  +++Q   +        A       
Sbjct: 70  V---VQMHMETYADPARYTYSGKVFRKQETDETRANEYVQVGYEVFDGQNPAAADAEVFA 126

Query: 151 MADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLR------AIDKLD 204
           +       G+          +  +L   +  +    D K      + R       + +  
Sbjct: 127 VIAA----GLAGLPLRAATGDIGVLMAAVRGLRTTEDRKAALLRHIWRPVRFRALLRRYG 182

Query: 205 KFGLQGVKLLLGEGRTDNSGD---------------------FTKGANLTSEQIDIMVSF 243
              +  ++  L       +                           A L+S++  ++ + 
Sbjct: 183 AGDVPPLRAALLAADDPFAAAGPEIGLRSQAEVAARIAALRADAAAAPLSSDETALIDAI 242

Query: 244 LSID--LEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
           L +      ++  L ++     +       +      +   G + + +    +  R    
Sbjct: 243 LGLRATSTDALSVLRDIAVDMPSIGSAVRRMEARLHAMAARGIDVDTLDFEGSYGR---- 298

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
                 E   GF       +      +  GGRYD
Sbjct: 299 ---TSLEYYDGFVFGFYASERPELPPIATGGRYD 329


>gi|284006267|emb|CBA71503.1| threonyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 6/102 (5%)

Query: 379 LITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
            I  ++         Q   + L   GIR +  L  ++  G +++    R  P  ++ G  
Sbjct: 539 QIVIINITDAQADFVQKVVKKLSNFGIRVKADL-RNEKIGFKIREHTLRRVPYMLVCGDK 597

Query: 439 ERSRGMLQI-----KDLAKGKELSREIKNNESWREARVAQIT 475
           E     + +     KDL          +  +  R  R+ Q+ 
Sbjct: 598 EVESNQVSVRTRDGKDLGTFDVTEFAERVLDEIRTRRIYQLE 639



 Score = 41.7 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/197 (8%), Positives = 49/197 (24%), Gaps = 11/197 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G A        I   +   IR     Y +  ++ PL+     L +     +  
Sbjct: 256 MQEEAP-GMAFWHNDGWVIFRELETFIRTKLNEYRYQEVKGPLMMDR-ILWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KENMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             +      + I  K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQILTEVKSCI--------KMIYHVYATFGFEKIAVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKL 203
           + ++       RA   L
Sbjct: 425 EKRIGTDAQWDRAESDL 441


>gi|262306393|gb|ACY45789.1| his-tRNA synthetase [Periplaneta americana]
          Length = 150

 Score = 43.3 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 19/126 (15%)

Query: 162 RNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTD 221
             D+ I +N+R++LDG+ E  G+  D    +   +  A+DKLDK   + V+         
Sbjct: 25  IGDFLIKVNHRQLLDGLFEACGVPSD----KFRTICSAVDKLDKSPWEEVRK-------- 72

Query: 222 NSGDFTKGANLTSEQIDIMVSFLSIDLE----KSMHELYELVKGTIAGEKGFNELVVISE 277
              +      L+ E  D +  ++ +  +    + + +   LV  +    +G   + +  +
Sbjct: 73  ---EMVXEKGLSPEAADRIGEYVRLSGKMELVEQLLQDQALVGRSKTAREGLEAMSLFLK 129

Query: 278 LVRKSG 283
                G
Sbjct: 130 YCEIYG 135


>gi|293336836|ref|NP_001169639.1| hypothetical protein LOC100383520 [Zea mays]
 gi|224030583|gb|ACN34367.1| unknown [Zea mays]
          Length = 692

 Score = 43.3 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 37/338 (10%), Positives = 88/338 (26%), Gaps = 40/338 (11%)

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV-----LRAI 200
                +   L ++GI +       +    +            +     +         A 
Sbjct: 367 YFIGRVYLFLTSLGIDKGRLRFRQHLPNEMAHYAADCWDAEIECSYGWIECVGIADRSAY 426

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D        GV L+  E  +       +   +   + D+ ++F     +K + E  E + 
Sbjct: 427 DLKAHTDKSGVPLVAHEKFS--KPREVEKLVIVPSKKDLGLAFKG--NQKMVLEALEAMS 482

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
              A  +   EL    E   K       + I+  +V                  V     
Sbjct: 483 EKEAF-EMKAELETKGETNFKVCTLGKDVVITKKMVSISMEKKLEHQRVFTPSVVEPSFG 541

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI-KEMGPVL 379
              +   +     Y       +                    + L               
Sbjct: 542 IGRIIYCLFEHSFYTRPSKSEE--------------------EQLNVFRFPPLVAPIKCT 581

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGT 437
           +  +  + +     ++  + L TAGI   +   ++ + G   +YA  D    P A+   +
Sbjct: 582 VFPLVKNQEFDDAAKVIAKALTTAGISHIID-TTAISIGR--RYARTDEIGVPFAVTVDS 638

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
              +   + I++    +++  +I       +      +
Sbjct: 639 ---ATN-VTIRERDSKEQVRVDIDEVAPVVKQLTEGQS 672


>gi|330977708|gb|EGH77611.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 477

 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400


>gi|219685509|ref|ZP_03540326.1| threonine--tRNA ligase [Borrelia garinii Far04]
 gi|219672908|gb|EED29930.1| threonine--tRNA ligase [Borrelia garinii Far04]
          Length = 581

 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 2/84 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +  ++             + AGIR ++   SS+    +++    +  P   
Sbjct: 480 WLSPVQAVIIPVNNTVEDYTIKVLNKFKNAGIRIKLDNSSSR-MNAKIREYQAKKIPYMF 538

Query: 434 IQGTGERSRGMLQIKDLAKGKELS 457
           I G  E     + I+     +++S
Sbjct: 539 IIGEREAIEEKISIRT-RTNEQIS 561


>gi|114767278|ref|ZP_01446118.1| threonyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114540584|gb|EAU43657.1| threonyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 649

 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 41/391 (10%), Positives = 96/391 (24%), Gaps = 29/391 (7%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N  TI    + Y      R+        +   +   +  G      +    + + +    
Sbjct: 273 NGWTIYTSLQDYMRRQQHRDGYVEVNTPQVVDRKLWEASGHWDNYQENMFIVEVDEEHAR 332

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
                    +       +     K       ++ E     R        G+  V+     
Sbjct: 333 EKSINALKPMNCPCHVQIFNSGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRG---- 388

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     + +E    +     I  +   H     +        G  E     E
Sbjct: 389 FTQDDAHIFCTDDQIEAETKKFIEFLAGIYADLGFHNWTIKLSTRPEKRIGSEESWDRVE 448

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRY 334
                   +           G  Y     +   +AI         Q              
Sbjct: 449 AALGDACKAAGYGFELQEGEGAFYGPKLEFTLTDAIGREWQCGTLQVDPNLPDRLDASYI 508

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                + +   +           + + ++              V++ ++  ++D      
Sbjct: 509 GQDGEKHRPVMLHRAVLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSEAD--DYVH 566

Query: 395 MYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                L+ AG+RAE  + + K        + G           P+ +  G  E     + 
Sbjct: 567 EVVAELKAAGVRAEADIRNEKINYKVREHSVGK---------VPVILAVGHREVEERTVT 617

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIP 477
           ++ L  G++ + ++       +    + T P
Sbjct: 618 VRRL--GEKQT-KVAALAEITQELGVEATPP 645


>gi|126179365|ref|YP_001047330.1| glycyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|125862159|gb|ABN57348.1| glycyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 576

 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V +  + +     +  Q  T+ L    I A+     S   G + +  D    P A+   
Sbjct: 473 QVAVFPLMNRDGLETVAQTITERLTQCRILAQ--YDDSGAIGRRYRRQDEVGTPFAVTVD 530

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                   + ++D    +++   I+       A ++
Sbjct: 531 YETLEDNTVTVRDRDSMEQVRIPIERLPEVLSALIS 566


>gi|71991342|ref|NP_001022777.1| Prolyl tRNA Synthetase family member (prs-1) [Caenorhabditis
           elegans]
 gi|459009|gb|AAA50660.1| Prolyl trna synthetase protein 1, isoform a [Caenorhabditis
           elegans]
          Length = 581

 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 50/401 (12%), Positives = 106/401 (26%), Gaps = 44/401 (10%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
             D  G       +             GIK+           + +  LE+   H  D   
Sbjct: 115 YYDVSGCYVLRPWSFAVWESIQEWFDSGIKKLGVKNCYFPMFVSNAALEREKTHIADFAP 174

Query: 192 ERLIVLRAIDKLDKFGL------QGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
           E   V RA +      +      + V     +    +  D     N     +       +
Sbjct: 175 EVAWVTRAGNSEMAEPIAIRPTSETVMYPSYKKWVQSHRDLPIKLNQWCNVVRWEFKHPT 234

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTG- 304
             L        E             E+  I +L    G  ++ + I     R  E     
Sbjct: 235 PFLRTREFLWQEGHTAFANPADAEKEVFQILDLYA--GVYTDLLAIPVVKGRKSEKEKFA 292

Query: 305 -----CVYEAILGFPVMNEKQ----KPVVFGSVGGGGRYDGLVSR----FKGQNVPATGF 351
                   EA +       +           S      Y+         F  QN      
Sbjct: 293 GGDFTTTVEAYVACNGRGIQGATSHHLGQNFSKMFDISYEDPAKEGERAFAWQNSWGLST 352

Query: 352 SIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ----MYTQMLRTAGIRA 407
               + +++                 V++  +   +++           T+ L   G++A
Sbjct: 353 RTIGAMVMIHGDDKGLVLPPRVAAVQVIVVPVGFKTENKQSLFDAVDKVTKDLVADGVKA 412

Query: 408 EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ--IKDLAKGKELSREIKNNES 465
           E  L  + N G +  + + +  P+    G  + ++  +   I+    G++    ++    
Sbjct: 413 EHDLRENYNAGWKFNHWELKGVPIRFEVGPNDLAKNQVTAVIRH--NGEKKQLSLEGLSK 470

Query: 466 WREARVAQI--------------TIPISELVSTVKKILQEN 492
             ++ + +I               +  +  +   KK+L E 
Sbjct: 471 TVKSLLDEIHTAMYNKVLAQRDSHLKSTTCIEEFKKLLDEK 511


>gi|159903594|ref|YP_001550938.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687108|sp|A9BAX2|SYT_PROM4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|159888770|gb|ABX08984.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 638

 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV I  M     + S  +  T  L   G R ++ L  ++  G +++       P  +
Sbjct: 535 WLAPVQIIVMGITDRNSSCCESLTTKLINKGYRVKLDL-RNEKIGFKIREHTLNRIPYLL 593

Query: 434 IQGTGERSRGMLQIK 448
           I G  E   G + ++
Sbjct: 594 IIGDKEEKEGKIAVR 608



 Score = 41.0 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 5/113 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETP-LLEYSDSLGKFLPDEDRPNKGVFS 72
           G          I   +   IR++  N  +  ++TP  ++ S  L +     D+    +F+
Sbjct: 261 GMVFWHPNGWSIYQVLEKYIRDVLNNNYYQEVKTPQAVDRS--LWEKSGHWDKFKDDMFT 318

Query: 73  LQDDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
               + +  +++        +   +   +    P R    G   RNE  G   
Sbjct: 319 -TTSENREYAIKPMNCPCHIQIFNQGLKSYRDLPIRLAEFGSCHRNEPSGALH 370


>gi|312864390|ref|ZP_07724623.1| proline--tRNA ligase [Streptococcus downei F0415]
 gi|311100111|gb|EFQ58322.1| proline--tRNA ligase [Streptococcus downei F0415]
          Length = 633

 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 18/153 (11%), Positives = 41/153 (26%), Gaps = 4/153 (2%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L K     +     ++ L
Sbjct: 52  GVYSYLPLANRVIEKFKTIMREEFDKIGAVEMLAPALLTAD-LWKESGRYETYGDDLYKL 110

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +                +   
Sbjct: 111 KNRDQAEFILGPTHEETFTALVRDSIKSYKQLPMNLYQIQAKYRDEKRPRNGLLRTREFI 170

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRN 163
                   +   +  E         EA+  +  
Sbjct: 171 MKDGYSFHANYDSLDEAYEAYRQAYEAIFTRAG 203



 Score = 37.5 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L  AG +      + +  G++   +D 
Sbjct: 528 NFPKELAPFDVHLITVNTKDQVAQDLTANLESQLVKAGYQVLTDDRNER-VGSKFSDSDL 586

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +    +N   
Sbjct: 587 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVNAQNLLE 624


>gi|213024165|ref|ZP_03338612.1| prolyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
          Length = 194

 Score = 43.3 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 1/52 (1%)

Query: 34 RNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRY 85
          R    N G   +  P+++ +D L +     ++    +    D   +   L  
Sbjct: 1  REEMNNAGAIEVSMPVVQPAD-LWQESGRWEQYGPELLRFVDRGERPFVLGP 51


>gi|313206166|ref|YP_004045343.1| prolyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445482|gb|ADQ81837.1| prolyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315023150|gb|EFT36163.1| prolyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336389|gb|ADZ12663.1| Prolyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 491

 Score = 43.3 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 69/248 (27%), Gaps = 24/248 (9%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTI----VRGLEYYTGCVYEAI 310
             E        E+   E   +  +          + +   I     R          EA+
Sbjct: 170 WQEGHTAHATKEEAIAETEQMLNVYADFAEKFMAVPVVRGIKSPSERFAGAEETYCIEAL 229

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G            ++               +RL+ AL        
Sbjct: 230 MQDGKALQAGTSHFLGQNFAEAFDVKFTNKEGKIEYAWATSWGVSTRLMGALIMSHSDDN 289

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSK----YQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L +           L+  GI  +     +   G + 
Sbjct: 290 GLVLPPSLAPIQVVIVPIFKGEEQLKQIDEVAYELQSKLKALGISVKYDNRDTHKPGWKF 349

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
              + +  P+ I  G  +     ++I   A+   LS+E+K  ++        I + I EL
Sbjct: 350 AEYEMKGVPVRIAMGARDLENKTVEI---ARRDTLSKEVKPLDN--------IEVYIQEL 398

Query: 482 VSTVKKIL 489
           +  ++K +
Sbjct: 399 LEEIQKAI 406


>gi|300123873|emb|CBK25144.2| unnamed protein product [Blastocystis hominis]
          Length = 269

 Score = 43.3 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 6/77 (7%)

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSR-----GMLQIKDLAKGKELSREIKNNESWR 467
           SS + G +   AD    P A+                + +++    K++   I++     
Sbjct: 185 SSASIGRRYARADEIGIPFAVTIDFETVDEKSELFNTVTLRERDSMKQVRLPIEDVAVVV 244

Query: 468 EARVAQITIPISELVST 484
              V + T+   +L+  
Sbjct: 245 NDIVKERTV-WEDLLEK 260


>gi|298674282|ref|YP_003726032.1| pyrrolysyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287270|gb|ADI73236.1| pyrrolysyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 414

 Score = 43.3 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 5/107 (4%)

Query: 28  RILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR-PNKGVFSLQDDDGQWISLRYD 86
           ++  +I   + + GF  I+ P++   DS+ K   D D   +K +F L +       LR  
Sbjct: 205 KLERTISQFFVDKGFIEIKAPIIIDIDSVKKMGIDTDHKLSKQIFYLDNKH----CLRPM 260

Query: 87  LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           L   L +++      +  P + + IGP +R E  G     +F   + 
Sbjct: 261 LAPGLYQWLKNFDKILPDPIKIFEIGPCYRKESEGSQHLEEFTMFNF 307


>gi|145349033|ref|XP_001418945.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579175|gb|ABO97238.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 677

 Score = 43.3 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 46/159 (28%), Gaps = 8/159 (5%)

Query: 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLE--SSTNNIKEMGPVLITT 382
                 G  Y   V                 +  I      +       +       I  
Sbjct: 508 VTKTVNGRNYTPSVIEPSFGIGRIMYCMFEHAFYIRPDDEQKTVLRLTPVVAPIKTTIFP 567

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGTGER 440
           + +D    +      +ML T GI A++   ++ + G   +YA  D    P A+       
Sbjct: 568 LVNDDKLNAIAAEMNKMLTTNGISAKLD-ATAISVGK--RYARTDELGVPFAVTVDHRSV 624

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           +   + +++     ++   I         R+ ++T+   
Sbjct: 625 TENTVTVRERDSCGQVRVPIPEVPGLL-GRLCKMTVDWE 662


>gi|126462800|ref|YP_001043914.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166225489|sp|A3PLC6|SYT_RHOS1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|126104464|gb|ABN77142.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 646

 Score = 43.3 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 30/263 (11%), Positives = 65/263 (24%), Gaps = 18/263 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +I   + D +R      G+  I TP +     L +     +   + +F +
Sbjct: 266 GMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQVVDRK-LWEASGHWEAYKENMFIV 324

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           +       + +  +L+             +        ++YR  P+   E     R+   
Sbjct: 325 EVEEEHAKEKRINALKPMNCP-------CHVQVYNQGLKSYRDLPLRLAEFGSCHRYESS 377

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
                          DA +                       +        +   +    
Sbjct: 378 GSMHGLMRVRGFVQDDAHIFCTEDQIESECAAFIELLSSVYKDLG-----FDSFEIKLST 432

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +   R+    A DK++      ++ +      D       G  L  +  D +        
Sbjct: 433 RPEVRIGSDEAWDKVETALENAIRKVGAAYEIDPGEGAFYGPKLDFKLTDAIGRKWQCGT 492

Query: 249 EKSMHELYELVKGTIAGEKGFNE 271
            +    L   +     GE G   
Sbjct: 493 FQVDPNLPTRLGAEYIGEDGAKH 515



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/335 (12%), Positives = 87/335 (25%), Gaps = 29/335 (8%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD--KLNE 192
              S    A  E   ++    E    KR +    +N    +    + +  + D   +L E
Sbjct: 308 WEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAE 367

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                R        GL  V+        D++  F     + SE    +    S+  +   
Sbjct: 368 FGSCHRYESSGSMHGLMRVRG----FVQDDAHIFCTEDQIESECAAFIELLSSVYKDLGF 423

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                 +        G +E     E   ++               G  Y     ++    
Sbjct: 424 DSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAAYEIDPGEGAFYGPKLDFKLTDA 483

Query: 313 FPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                +           +  G        ++ +   +           + + +++     
Sbjct: 484 IGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGILIENYAGKL 543

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQL 421
                   V++ ++  D+D           LR  G+RAE    + K        + G   
Sbjct: 544 PFWLAPRQVVVASIVSDAD--PYVAEVVAALRARGVRAEADTRNEKINYKVREHSVGK-- 599

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDL-AKGKE 455
                   P+ +  G  E     + ++ L     E
Sbjct: 600 -------VPVILAIGMQEVEARSVSVRRLGETRTE 627


>gi|163848039|ref|YP_001636083.1| glycyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222525927|ref|YP_002570398.1| glycyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669328|gb|ABY35694.1| glycyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449806|gb|ACM54072.1| glycyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 539

 Score = 43.3 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 8/93 (8%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQ-------GTGE 439
            + ++  +   + L  AG R       +   G   +  D    P  I         G   
Sbjct: 447 EEIVATAKAVRRQL-QAGGRMRTIYDDTGAIGKLYRRQDEIGTPFCITVDFDTIGQGKDP 505

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
              G + ++D     +    I   E++   RV+
Sbjct: 506 ALAGTVTVRDRDTMAQERVPIAELEAYLRDRVS 538


>gi|327313290|ref|YP_004328727.1| proline--tRNA ligase [Prevotella denticola F0289]
 gi|326944871|gb|AEA20756.1| proline--tRNA ligase [Prevotella denticola F0289]
          Length = 493

 Score = 43.3 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 70/257 (27%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L V ++   K         + S   R          EA+
Sbjct: 173 WQEGHTAHATREEAEKEAQTMLHVYADFAEKWLAVPVVQGVKSETERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           +++               +RLI AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKSFDVTYLNKDNKPEYVWATSWGVSTRLIGALIMTHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V I  +    + L    +K Q     LR  GI  +     +K  G   
Sbjct: 293 GLVLPPRIAPIQVAIIPIFKGEEQLKEITAKLQPVIDQLRELGITVKYDDSDNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+AD   +  P+ +  G  +     +++                   R   + +  +   
Sbjct: 351 KFADYELKGVPVRLAMGGRDLQDNTIEV------------------MRRDTLEKENVSFD 392

Query: 480 ELVSTVKKILQENKEEI 496
            +V  VK +L + ++ I
Sbjct: 393 GIVGRVKSLLDDIQDNI 409


>gi|300722778|ref|YP_003712069.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629286|emb|CBJ89885.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 642

 Score = 43.3 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 37/339 (10%), Positives = 86/339 (25%), Gaps = 5/339 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                + +     +  +Y +   N      I  +      D      
Sbjct: 297 FMMDRIMWEKTGHWENYKENMFTTSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGALHGL-MRVRGFTQDDAHIFCTEDQILQEVSSCIKMIYDVYGTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G  +    +E         N I+       G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGTEKQWDEAEADLAKALTQNSIEFEYQPGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPARLSASYVGENNERKVPVMIHRAVLGSLERFIGILTEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P  +  M+      +  Q   + L+  GIRA+  L  ++  G +++    R  P  
Sbjct: 535 TWLAPQQVVVMNITDGQSNYVQELVKKLQDVGIRAKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           ++ G  E   G + ++        S ++          +
Sbjct: 594 LVCGDKEVESGKVSVRTRRGKDLGSIDVSEFTEKLLTEI 632



 Score = 37.9 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/159 (5%), Positives = 41/159 (25%), Gaps = 3/159 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G A        I   +   +R   + Y +  ++ P       + +     +  
Sbjct: 256 MQEEAP-GMAFWHNDGWTIFRELETFVRTKLKEYQYQEVKGP-FMMDRIMWEKTGHWENY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+    + +   ++        +   +   +                 +       
Sbjct: 314 KENMFT-TSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                      +     + ++   ++  ++ +      +
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQILQEVSSCIKMIYDVYGTF 411


>gi|237815491|ref|ZP_04594489.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|237790328|gb|EEP64538.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A]
          Length = 693

 Score = 43.3 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 60/193 (31%), Gaps = 18/193 (9%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K  ++   ++  +R   +++G+  + TP +    SL +           +F +
Sbjct: 300 GVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQV-LDKSLWETSGHWGWYRDNMFKV 358

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGRFR 126
                  DD +  +L+        +   ++        P +    G V R E  G     
Sbjct: 359 TVAGDDTDDDRVFALKPMNCPGHVQIF-KHGLKSYRDLPIKLAEFGNVHRYEPSGALH-- 415

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                    +     T D        + + A  +  ND  + +      + I  K+    
Sbjct: 416 -------GLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRP 468

Query: 187 DDKLNERLIVLRA 199
           + ++    +  RA
Sbjct: 469 EKRVGSDELWDRA 481



 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVV-----I 275
           D++  F     + +E + I    LS+  +    E+   +        G +EL       +
Sbjct: 426 DDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVM 485

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYD 335
             ++ +    SN IK       G  Y     +E  L   +  E Q            R+ 
Sbjct: 486 MTVLEQIRQQSNNIKTGILPGEGAFYG--PKFEYTLKDAIGREWQCGTTQVDFNLPERFG 543

Query: 336 GLV-----SRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                    + +   +           L + +++             V++ T+  D+D  
Sbjct: 544 AFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATITSDADEY 603

Query: 391 SK---------YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERS 441
           +K                LR   I    +     +             P+ ++ G  E  
Sbjct: 604 AKEAAAKLKAAGLQVVTDLRNEKIN---YKVREHSLQK---------VPVILVCGKREAE 651

Query: 442 RGMLQIKDLAKGKELSREIKN 462
              + ++ L    + S  +  
Sbjct: 652 EKTVNMRRLGSRDQESMTLDE 672


>gi|221639813|ref|YP_002526075.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254783534|sp|B9KKC7|SYT_RHOSK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|221160594|gb|ACM01574.1| Threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 646

 Score = 43.3 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 30/263 (11%), Positives = 65/263 (24%), Gaps = 18/263 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +I   + D +R      G+  I TP +     L +     +   + +F +
Sbjct: 266 GMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQVVDRK-LWEASGHWEAYKENMFIV 324

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           +       + +  +L+             +        ++YR  P+   E     R+   
Sbjct: 325 EVEEEHAKEKRINALKPMNCP-------CHVQVYNQGLKSYRDLPLRLAEFGSCHRYESS 377

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
                          DA +                       +        +   +    
Sbjct: 378 GSMHGLMRVRGFVQDDAHIFCTEDQIESECAAFIELLSSVYKDLG-----FDSFEIKLST 432

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +   R+    A DK++      ++ +      D       G  L  +  D +        
Sbjct: 433 RPEVRIGSDEAWDKVETALENAIRKVGAAYEIDPGEGAFYGPKLDFKLTDAIGRKWQCGT 492

Query: 249 EKSMHELYELVKGTIAGEKGFNE 271
            +    L   +     GE G   
Sbjct: 493 FQVDPNLPTRLGAEYIGEDGAKH 515



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/335 (12%), Positives = 87/335 (25%), Gaps = 29/335 (8%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD--KLNE 192
              S    A  E   ++    E    KR +    +N    +    + +  + D   +L E
Sbjct: 308 WEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAE 367

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                R        GL  V+        D++  F     + SE    +    S+  +   
Sbjct: 368 FGSCHRYESSGSMHGLMRVRG----FVQDDAHIFCTEDQIESECAAFIELLSSVYKDLGF 423

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                 +        G +E     E   ++               G  Y     ++    
Sbjct: 424 DSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAAYEIDPGEGAFYGPKLDFKLTDA 483

Query: 313 FPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                +           +  G        ++ +   +           + + +++     
Sbjct: 484 IGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGILIENYAGKL 543

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQL 421
                   V++ ++  D+D           LR  G+RAE    + K        + G   
Sbjct: 544 PFWLAPRQVVVASIVSDAD--PYVAEVVAALRARGVRAEADTRNEKINYKVREHSVGK-- 599

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDL-AKGKE 455
                   P+ +  G  E     + ++ L     E
Sbjct: 600 -------VPVILAIGMQEVEARSVSVRRLGETRTE 627


>gi|73668741|ref|YP_304756.1| glycyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|72395903|gb|AAZ70176.1| glycyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 607

 Score = 43.3 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 2/89 (2%)

Query: 377 PVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
            V +  +    +     +     LR   +        S   G + +  D    P  +   
Sbjct: 500 QVAVLPLLTRKELADPAKDIIVKLREKTLLV--NYDDSGTIGRRYRRNDEIGTPYCVTVD 557

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNES 465
                 G + I+D    +++   +K  E+
Sbjct: 558 YDTLKDGTVTIRDRDSMRQIRAPVKGIEN 586



 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 1/49 (2%)

Query: 13 RGFADCPTKEIRIRNRILDSIRNIY-ENYGFDPIETPLLEYSDSLGKFL 60
          RGF D       ++ RI  + R  Y    GF  IE P +   +      
Sbjct: 28 RGFYDYGPLGSTLKRRIEQTWREFYVIQEGFMEIECPTIGIEEVFIASG 76


>gi|325188965|emb|CCA23493.1| prolyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 620

 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 9/141 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  ++ D I    E    +  + P +  SD L K           +F+ 
Sbjct: 53  GTFAMLPLATRVLQKLEDIIDTEMEKINGNKCDLPAIVSSD-LWKLSDRWRSRTSELFTF 111

Query: 74  QDDDGQWISLRY--D--LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
           +D       L    +  +TA     VA++ ++     R Y+IG  +R+E        +  
Sbjct: 112 RDRRNNEQILAPTHEEPMTA----LVAQHHNSTHESLRLYQIGKKYRDEVRPRFGLLRAR 167

Query: 130 QCDVDNVGSSAETADAEMCMM 150
           +  + ++ S        +   
Sbjct: 168 EFIMKDMYSFDTNYSNAVTTY 188


>gi|313139724|ref|ZP_07801917.1| glycyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313132234|gb|EFR49851.1| glycyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 365

 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 30/101 (29%), Gaps = 2/101 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  S        LR       +    +   G + +  D    PL I      
Sbjct: 229 VLPLSKKPELQSIAHDLAADLRQHEW--MIDYDEAGAIGRRYRREDEIGTPLCITVDFDT 286

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
                + I++    ++    +     +  ARV++  +   E
Sbjct: 287 IDDQAVTIRERDTMQQERVALDKVADYVAARVSEKRVRYPE 327


>gi|302411110|ref|XP_003003388.1| prolyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261357293|gb|EEY19721.1| prolyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 474

 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 50/463 (10%), Positives = 128/463 (27%), Gaps = 72/463 (15%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI++++   I    ++ G   +    +  S  L +     ++    +F+ QD  
Sbjct: 76  LLPMGYRIQSKLESLIDKYMQSLGASRVALSSI-TSKKLWQQSGRYEKLGSELFNFQDRR 134

Query: 78  GQWISLRY----DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           G    L      ++T+ +A+ V         P R Y+    +R+E        +  +  +
Sbjct: 135 GADYMLAPTHEEEVTSLVAQSV---KSYKELPLRLYQTTRKYRDELRPRHGLLRTREFTM 191

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
            ++ +      A +                        +         +GL         
Sbjct: 192 KDLYTFDVDTSAAIQ------------------TYEQVQGAYASFFGSLGLP-------- 225

Query: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMH 253
                         +   +   G+   D S ++   + +  + I    +           
Sbjct: 226 --------------VVKARAGSGDMGGDLSHEYHFTSPIGEDLIMKCNN----------- 260

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV--YEAIL 311
              E    +   E+  N+  + ++   K    +  +K +  +       T       A +
Sbjct: 261 --CEFAVNSDIAEQPANDSAMDAQHCPKCEAGTLEVKEALEVGHTFHLGTRYSEPLGARI 318

Query: 312 GFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNN 371
             P  ++        +          +           G         V L+        
Sbjct: 319 ALPTTSQGDSQSA-DTSAARASTHIQMGCHGIGVSRLIGAVAEHFADPVGLQ----WPRA 373

Query: 372 IKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCP 430
           I      ++     ++ ++  Y      L       ++ L     +   +LK AD    P
Sbjct: 374 ISPYEVEIVFADGLEAQAVQIYDDVVHGL---SHTTDVLLDDRPVSLPWKLKDADLTGYP 430

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           + ++ G   +  G ++++    G + + +  +        + Q
Sbjct: 431 IVVVLGQVWKKTGNIELQCRRLGIKETVQPSDILQRISELLWQ 473


>gi|219682056|ref|YP_002468440.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254783513|sp|B8D730|SYT_BUCAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219621789|gb|ACL29945.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311085869|gb|ADP65951.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086439|gb|ADP66520.1| threonyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087022|gb|ADP67102.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087587|gb|ADP67666.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 642

 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 41/361 (11%), Positives = 90/361 (24%), Gaps = 10/361 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           +          +         +       +  +   + V             +       
Sbjct: 255 HMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDKLIWKQSGHWDNYK 314

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           + +     +  +Y I   N      I         D                   L G+ 
Sbjct: 315 NAIFTTLSEHREYCIKPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSLHGL- 373

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     + SE  D +     +       ++   +        G + L
Sbjct: 374 MRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYSTFHFKKILVKLSTRPEKRIGTDSL 433

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              SE         N +        G  Y     +  +      N +   +         
Sbjct: 434 WNESEKDLSDMLIENHLSFEYQSGEGAFYGPKIEF-ILQDSLDRNWQCGTIQLDFYLPLR 492

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                ++    + VP       +G     + +   E S N    + PV +  +     S 
Sbjct: 493 LSSFYINEKNEKKVPVIIHRAILGSIERFIGILIEECSGNLPTWLSPVQVVIISITDISS 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +   +      IR E  L  ++  G +++    R  P  +I G  E S   + +++ 
Sbjct: 553 GYVKELFKKFSDVNIRIECDL-RNEKIGFKIREHTLRRIPYILICGEKESSSKKISVRNR 611

Query: 451 A 451
            
Sbjct: 612 Q 612



 Score = 42.1 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 3/161 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   I N + + +R   + Y ++ ++TPLL     + K     D  
Sbjct: 256 MQEESP-GMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDK-LIWKQSGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+   +  +   ++        +       +                 +       
Sbjct: 314 KNAIFTTLSEH-REYCIKPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
                +     +       ++   + D ++ +    + +H 
Sbjct: 373 LMRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYSTFHF 413


>gi|218258680|ref|ZP_03475001.1| hypothetical protein PRABACTJOHN_00656 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225305|gb|EEC97955.1| hypothetical protein PRABACTJOHN_00656 [Parabacteroides johnsonii
           DSM 18315]
          Length = 514

 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 8/106 (7%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K +   +MLR    R +       + G + +  D    P  I      
Sbjct: 415 VLPLVKKDGLPEKAEEIMKMLR-FDFRCQ--YDEKDSIGKRYRRQDAIGTPYCITVDHDT 471

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                + I+     ++    I         +     + +  L+  +
Sbjct: 472 LKDNCVTIRFRDTMEQERVSIDKLHDIISEK-----VSMKNLLKKI 512


>gi|114328278|ref|YP_745435.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122326764|sp|Q0BRP0|SYT_GRABC RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|114316452|gb|ABI62512.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 642

 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 90/339 (26%), Gaps = 12/339 (3%)

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
            D      S         M +A   +              + +I    L          +
Sbjct: 299 VDRSLWEDSGHWDKYREHMFIATVEDEEKTLALKPMNCPCHVQIFRHGLRSYKELPLR-M 357

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEK 250
            E     R        G+  V+        D++  F     +  E  D +    S+  + 
Sbjct: 358 AEFGACHRYEPSGALHGIMRVRS----FTQDDAHIFCMPEQIAKETADFVAMLASVYRDL 413

Query: 251 SMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVY--- 307
                            G +E    +E   +       ++       G  Y     +   
Sbjct: 414 GFDSFRVKFADRPESRAGKDEDWDRAEHELREACRLAGVEYELNPGEGAFYGPKLEFVLR 473

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
           +AI         Q   V              +R +   +           + + ++    
Sbjct: 474 DAIGRDWQCGTLQVDYVLPERLNAEYVAEDGARRRPVMLHRAILGSFERFIGILIEQYAG 533

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIR-AEMFLGSSKNFGNQLKYADR 426
                    PV++  +  D++  +        L+ AG+  AE  L  ++    +++    
Sbjct: 534 RFPLWLAPVPVVVAPIVSDAN--AYAMEVVTALKRAGVTWAEADL-RNEKINAKIREHSL 590

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
            + P+ ++ G  E  +  + ++ L   ++    +    S
Sbjct: 591 AHVPVILVVGRREAEQRQVALRRLGSQEQQVMALDEAIS 629



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 53/201 (26%), Gaps = 13/201 (6%)

Query: 21  KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVF--SLQDDDG 78
           K  R+   + + +R      G++ + TP L    SL +     D+  + +F  +++D+  
Sbjct: 269 KGWRLYRALENYMRRRQIEAGYEEVRTPQLVDR-SLWEDSGHWDKYREHMFIATVEDE-E 326

Query: 79  QWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGP-VFRNEKHGPGRFRQFIQCDVDNVG 137
           + ++L+        +    +                     +                  
Sbjct: 327 KTLALKPMNCPCHVQIF-RHGLRSYKELPLRMAEFGACHRYEPSGALHGIMRVRSFTQDD 385

Query: 138 SSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVL 197
           +       ++    AD +  +     D        K                  +     
Sbjct: 386 AHIFCMPEQIAKETADFVAMLASVYRDLGFDSFRVKF-------ADRPESRAGKDEDWDR 438

Query: 198 RAIDKLDKFGLQGVKLLLGEG 218
              +  +   L GV+  L  G
Sbjct: 439 AEHELREACRLAGVEYELNPG 459


>gi|322374996|ref|ZP_08049510.1| proline--tRNA ligase [Streptococcus sp. C300]
 gi|321280496|gb|EFX57535.1| proline--tRNA ligase [Streptococcus sp. C300]
          Length = 617

 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 43/140 (30%), Gaps = 5/140 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +       +       ++   G  R    
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQ-PKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMM 150
              D     A     ++   
Sbjct: 156 IMKDGYSFHANYDSLDVTYD 175


>gi|290890493|ref|ZP_06553568.1| hypothetical protein AWRIB429_0958 [Oenococcus oeni AWRIB429]
 gi|290479889|gb|EFD88538.1| hypothetical protein AWRIB429_0958 [Oenococcus oeni AWRIB429]
          Length = 570

 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         RI N+I   IR        + +  P +  ++ L K           ++ L
Sbjct: 38  GIYAYLPLANRIINKIESIIREEMSRIDANEMLMPEMIPAE-LWKESGRFYTYGPQMYQL 96

Query: 74  QDDDGQWISLRY 85
           +D   +   +  
Sbjct: 97  KDRHDREFIMAP 108


>gi|219681500|ref|YP_002467885.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471181|ref|ZP_05635180.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254783512|sp|B8D8S6|SYT_BUCA5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219624343|gb|ACL30498.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 642

 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 41/361 (11%), Positives = 90/361 (24%), Gaps = 10/361 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           +          +         +       +  +   + V             +       
Sbjct: 255 HMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDKLIWKQSGHWDNYK 314

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           + +     +  +Y I   N      I         D                   L G+ 
Sbjct: 315 NAIFTTLSEHREYCIKPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSLHGL- 373

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     + SE  D +     +       ++   +        G + L
Sbjct: 374 MRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYSTFHFKKILVKLSTRPEKRIGTDSL 433

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              SE         N +        G  Y     +  +      N +   +         
Sbjct: 434 WNESEKDLSDMLIENHLSFEYQSGEGAFYGPKIEF-ILQDSLDRNWQCGTIQLDFYLPLR 492

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                ++    + VP       +G     + +   E S N    + PV +  +     S 
Sbjct: 493 LSSFYINEKNEKKVPVIIHRAILGSIERFIGILIEECSGNLPTWLSPVQVVIISITDISS 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +   +      IR E  L  ++  G +++    R  P  +I G  E S   + +++ 
Sbjct: 553 GYVKELFKKFSDVNIRIECDL-RNEKIGFKIREHTLRRIPYILICGEKESSSKKISVRNR 611

Query: 451 A 451
            
Sbjct: 612 Q 612



 Score = 42.1 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 3/161 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   I N + + +R   + Y ++ ++TPLL     + K     D  
Sbjct: 256 MQEESP-GMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDK-LIWKQSGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+   +  +   ++        +       +                 +       
Sbjct: 314 KNAIFTTLSEH-REYCIKPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
                +     +       ++   + D ++ +    + +H 
Sbjct: 373 LMRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYSTFHF 413


>gi|57640177|ref|YP_182655.1| ATP phosphoribosyltransferase, regulatory subunit [Thermococcus
           kodakarensis KOD1]
 gi|57158501|dbj|BAD84431.1| ATP phosphoribosyltransferase, predicted regulatory subunit
           [Thermococcus kodakarensis KOD1]
          Length = 293

 Score = 43.3 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 32/174 (18%)

Query: 16  ADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLL-EYSDSLGKFLPDEDRPNKGVFSLQ 74
            D           I + +R +++ + +  I  P + EYS+S+ K                
Sbjct: 6   RDYL-----RLAEIGNRLRGVFDLWNYREIVFPAVEEYSESIRKGT-----------KFA 49

Query: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD 134
             + ++  +  D T+ + R      D      R Y I  V   E           +  V+
Sbjct: 50  -HNNEFYVICPDATSRIIR------DFNNGEARIYYISEVLDGEI------HGVWEAGVE 96

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
            +G        E+  ++   LE++G    D++I + + K+ +     I    ++
Sbjct: 97  LIGGREPDMYVEVPSVLITALESLG--IEDFYIDVGSVKVWEEATRGIEPFREE 148


>gi|291549825|emb|CBL26087.1| prolyl-tRNA synthetase, family I [Ruminococcus torques L2-14]
          Length = 478

 Score = 43.3 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 39/127 (30%), Gaps = 4/127 (3%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
              I  +  ++I    H    L K       L+ AG + ++   S K  G +    +   
Sbjct: 284 PPRIAPVQTMIIPIAQHKEGVLDKANELVDTLKAAGYKVKID-DSDKAPGWKFSGQEILG 342

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
            P  I  G  +       I      +++   +    +     +  +    +++    K  
Sbjct: 343 IPTRIEIGPKDIENNQAVIVRRDTREKIVVSLDELTTKLAEVLETM---QNDMFERAKAF 399

Query: 489 LQENKEE 495
           L  +  E
Sbjct: 400 LDSHINE 406


>gi|260888481|ref|ZP_05899744.1| threonine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838210|ref|YP_004412790.1| threonyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260861678|gb|EEX76178.1| threonine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329745974|gb|AEB99330.1| threonyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 593

 Score = 43.3 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           +  E   G      +  ++ N +L+  R I+E +G+  +  P++     L          
Sbjct: 195 MFDETAPGMPYWLPRGWKLFNALLEFWRGIHEAHGYQEVSAPVINNKR-LWVTSGHWAHY 253

Query: 67  NKGVF 71
            + +F
Sbjct: 254 KENMF 258



 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/276 (11%), Positives = 72/276 (26%), Gaps = 9/276 (3%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               +                 +  D + S L +  +  +    +   G I   + +N  
Sbjct: 326 RQDDDHTFLMEDQIAAEMGDIMDIADEIYSTLGMSCKAELSTRPDDFMGDI---ETWNVA 382

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
               + +    Y     +++               +  LG        +           
Sbjct: 383 EKELKAILDRKYGEGNYEVNEGDGAFYGPKIDLKMKDALGREWQVGTLQLDFQLPQNFDL 442

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
           +Y       K   V        + R I  L            + PV +  +    +    
Sbjct: 443 KYIAKDGSHKQPVVLHRAIFGSMERFIGVLIE-NFKGAFPFWLSPVQVGIVPIRPEHNDY 501

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +   Q L  + +R E+   + KN   ++K       P  ++ G  E     + I     
Sbjct: 502 AKKVAQKLFKSRVRFEVDY-ADKNMREKIKGFKHYKDPYILVLGDKEAEENTVSINVRGT 560

Query: 453 GKE-LSREIKNNESWREARVAQITIPISELVSTVKK 487
            ++     +            + ++   EL++ V +
Sbjct: 561 NEQLKDVPLDTFIEMCRTMNEEHSL---ELMTKVPE 593


>gi|54309339|ref|YP_130359.1| putative tRNA synthetase [Photobacterium profundum SS9]
 gi|46913775|emb|CAG20557.1| putative tRNA synthetase [Photobacterium profundum SS9]
          Length = 145

 Score = 43.3 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 19/113 (16%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+         Q   + L+  GIR    L  ++  G +++    +  P  ++ G  E 
Sbjct: 46  VVMNITDSQSEYVQEIVKKLQKCGIRVNADL-RNEKIGFKIREHTLKRVPYMLVCGDKEV 104

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
             G + ++        +R+ K+             + I ELV+ +++ +   K
Sbjct: 105 EAGEIAVR--------TRKGKDLG----------KLKIDELVAFLQQEISSRK 139


>gi|303253033|ref|ZP_07339186.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247204|ref|ZP_07529254.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302648123|gb|EFL78326.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306856262|gb|EFM88415.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 643

 Score = 43.3 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 46/346 (13%), Positives = 90/346 (26%), Gaps = 16/346 (4%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +               AD +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G + +   +E        +N +        G  Y     +       
Sbjct: 416 IQVKLSTRPENRIGDDAMWDRTEDGLAKALTANGLSYEIQEGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    +       G      V+   G+  P       +G     + + + E +    
Sbjct: 476 REWQCG-TIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQ---LKYADRRN 428
             + P     M+         Q  T+ L  AGIRA+  L + K  F  +   L+      
Sbjct: 535 TWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRR----- 589

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
            P  ++ G  E   G + ++     K         + + E    Q+
Sbjct: 590 VPYMLVCGDKEIEAGKVSVR---TRKGADLGTFTIDEFVEILKNQV 632



 Score = 37.9 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/197 (8%), Positives = 51/197 (25%), Gaps = 11/197 (5%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWERTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 ADLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +     + ++   +   +             I +      I  K+    
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTSCI--------RMVYDIYSTFGFSNIQVKLSTRP 424

Query: 187 DDKLNERLIVLRAIDKL 203
           ++++ +  +  R  D L
Sbjct: 425 ENRIGDDAMWDRTEDGL 441


>gi|238598681|ref|XP_002394671.1| hypothetical protein MPER_05401 [Moniliophthora perniciosa FA553]
 gi|215464082|gb|EEB95601.1| hypothetical protein MPER_05401 [Moniliophthora perniciosa FA553]
          Length = 164

 Score = 43.3 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 5/91 (5%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VLI  +    +        +  LR AGI + +   S+ + G   +YA  D    P  
Sbjct: 46  PTKVLIVPLSAKEEFDPLVNEISTKLRRAGIFSRVD-DSNTSIGK--RYARNDELGTPYG 102

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           I           + +++     +    I   
Sbjct: 103 ITVDFASVQNRTVTLRERDTMDQRISSIDEV 133


>gi|167034477|ref|YP_001669708.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189083619|sp|B0KKR8|SYT_PSEPG RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|166860965|gb|ABY99372.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 60/231 (25%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    ++   +    A   G  EL   +E   
Sbjct: 381 DDAHIFCTEEQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTRPAKRVGSEELWDRAETAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ---KPVVFGSVGGGGRYDGL 337
               N + ++       G  Y     +          +                      
Sbjct: 441 ADALNESGLEWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR +   +           + + ++                   M+             
Sbjct: 501 NSRVRPVMLHRAILGSFERFIGMLIEHYAGVFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KSLNGSGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVETQTVAVR 608



 Score = 38.3 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 35/142 (24%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  I+TP +     L +         + +F+ 
Sbjct: 261 GMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDR-ILWERSGHWSNYAENMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +  +  +++        +   +   +                 +              
Sbjct: 320 SSES-RDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + ++    AD +
Sbjct: 379 VQDDAHIFCTEEQVKKEAADFI 400


>gi|77463957|ref|YP_353461.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter
           sphaeroides 2.4.1]
 gi|123757748|sp|Q3J0X4|SYT_RHOS4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77388375|gb|ABA79560.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter
           sphaeroides 2.4.1]
          Length = 646

 Score = 43.3 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 30/263 (11%), Positives = 65/263 (24%), Gaps = 18/263 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +I   + D +R      G+  I TP +     L +     +   + +F +
Sbjct: 266 GMVFWHPNGWQIYRTLEDYMRGRLRQAGYKEIRTPQVVDRK-LWEASGHWEAYKENMFIV 324

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQF 128
           +       + +  +L+             +        ++YR  P+   E     R+   
Sbjct: 325 EVEEEHAKEKRINALKPMNCP-------CHVQVYNQGLKSYRDLPLRLAEFGSCHRYESS 377

Query: 129 IQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD 188
                          DA +                       +        +   +    
Sbjct: 378 GSMHGLMRVRGFVQDDAHIFCTEDQIESECAAFIELLSSVYKDLG-----FDSFEIKLST 432

Query: 189 KLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDL 248
           +   R+    A DK++      ++ +      D       G  L  +  D +        
Sbjct: 433 RPEVRIGSDEAWDKVETALENAIRKVGAAYEIDPGEGAFYGPKLDFKLTDAIGRKWQCGT 492

Query: 249 EKSMHELYELVKGTIAGEKGFNE 271
            +    L   +     GE G   
Sbjct: 493 FQVDPNLPTRLGAEYIGEDGAKH 515



 Score = 39.8 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/335 (12%), Positives = 87/335 (25%), Gaps = 29/335 (8%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD--KLNE 192
              S    A  E   ++    E    KR +    +N    +    + +  + D   +L E
Sbjct: 308 WEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAE 367

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                R        GL  V+        D++  F     + SE    +    S+  +   
Sbjct: 368 FGSCHRYESSGSMHGLMRVRG----FVQDDAHIFCTEDQIESECAAFIELLSSVYKDLGF 423

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                 +        G +E     E   ++               G  Y     ++    
Sbjct: 424 DSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAAYEIDPGEGAFYGPKLDFKLTDA 483

Query: 313 FPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                +           +  G        ++ +   +           + + +++     
Sbjct: 484 IGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGILIENYAGKL 543

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQL 421
                   V++ ++  D+D           LR  G+RAE    + K        + G   
Sbjct: 544 PFWLAPRQVVVASIVSDAD--PYVAEVVAALRARGVRAEADTRNEKINYKVREHSVGK-- 599

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDL-AKGKE 455
                   P+ +  G  E     + ++ L     E
Sbjct: 600 -------VPVILAIGMQEVEARSVSVRRLGETRTE 627


>gi|54023426|ref|YP_117668.1| glycyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|59798496|sp|Q5YZT7|SYG_NOCFA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|54014934|dbj|BAD56304.1| putative glycyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 466

 Score = 43.3 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 25/88 (28%), Gaps = 3/88 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      E     +   G + +  D    P  I      
Sbjct: 375 VLPLSRNADLTPKAKDLAAQLRKH-WNVEFD--DAGAIGRRYRRQDEIGTPFCITVDFDT 431

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWR 467
                + I++     +    +   E + 
Sbjct: 432 LEDQAVTIRERDSMAQERIALDKVEGYL 459


>gi|46206022|ref|ZP_00047792.2| COG3705: ATP phosphoribosyltransferase involved in histidine
          biosynthesis [Magnetospirillum magnetotacticum MS-1]
          Length = 193

 Score = 43.3 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 49 LLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLAR 93
          +L+  +   +   ++ R  + +F  QD  G  + LR + T P+ R
Sbjct: 1  MLQPVEPFLELSGEDIR--RRIFVTQDAAGAELCLRPEFTIPVCR 43


>gi|308176710|ref|YP_003916116.1| glycine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744173|emb|CBT75145.1| glycine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 461

 Score = 43.3 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 26/94 (27%), Gaps = 5/94 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           +  +  + +   K +     LR    I        +   G + +  D    P  I     
Sbjct: 370 VLPLSRNENLSPKAKDLAAELRKRWNI----DFDDAGAIGRRYRRQDEIGTPFCITVDFD 425

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                 + I++     +    +    ++   R+ 
Sbjct: 426 TLDDQAVTIRERDTMAQERVSLDQVTAYLSERLN 459


>gi|172053663|gb|ACB70969.1| PylS-derived acetyl-lysine-tRNA synthetase [synthetic construct]
          Length = 420

 Score = 43.3 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 61/155 (39%), Gaps = 23/155 (14%)

Query: 4   KTKLRAELPRGFADCPTKEIRIRN----------------RILDSIRNIYENYGFDPIET 47
           + K+   + + F +   + +  R                 ++   I   + + GF  I++
Sbjct: 171 EDKISLNMAKPFRELEPELVTRRKNDFQRLYTNDREDYLGKLERDITKFFVDRGFLEIKS 230

Query: 48  PLLEYSDSLGKFLPDED-RPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDT-IVFP 105
           P+L  ++ + +   + D   +K +F + D +   + LR  + AP     A   D  +  P
Sbjct: 231 PILIPAEYVERMGINNDTELSKQIFRV-DKN---LCLRP-MVAPTIFNYARKLDRILPGP 285

Query: 106 CRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            + + +GP +R E  G     +F   +   +GS  
Sbjct: 286 IKIFEVGPCYRKESDGKEHLEEFTMVNFFQMGSGC 320


>gi|118468169|ref|YP_888757.1| glycyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118169456|gb|ABK70352.1| glycyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 461

 Score = 43.3 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 24/91 (26%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +   +D   K +     LR      E     +   G + +  D    P  +      
Sbjct: 370 VLPLSRHADLSPKARDLAAELRR-NWNVEFD--DAGAIGRRYRRQDEIGTPYCVTVDFDS 426

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++     +    I     +   R
Sbjct: 427 LEDNAVTIRERDAMTQERIAIDKVSDYLAVR 457


>gi|312961943|ref|ZP_07776440.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311283753|gb|EFQ62337.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 11/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPNGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q ++ +  +++        +   +   +                 +              
Sbjct: 320 QSEN-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEEQMQAESAAFI 400



 Score = 37.1 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 43/392 (10%), Positives = 102/392 (26%), Gaps = 18/392 (4%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
            V  + +         +     + E  G    +     D      S   A+        +
Sbjct: 262 MVFWHPNGWTLYQVLEQYMRKVQREN-GYLEIKTPQVVDRSLWEKSGHWANY-----ADN 315

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD--DKLNERLIVLRAIDKLDKFGLQGV 211
                   R+     +N    +    + +  + +   +L E     R        G+  V
Sbjct: 316 MFTTQSENRDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRV 375

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           +        D++  F     + +E    +   + +  +    E+   +        G +E
Sbjct: 376 RG----FTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDFGFTEVEMKLSTRPEKRVGSDE 431

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSV 328
           L   +E    +  +S  +        G  Y     +        + +             
Sbjct: 432 LWDRAEAALAAALDSAGLAYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIR 491

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
            G        SR     +           + + ++  E +              M+    
Sbjct: 492 LGAEYVSEDNSRKHPVMLHRAILGSFERFVGILIEHYEGAFPAWLAPTQA--VIMNITDK 549

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                    + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 550 QADFAAEVEKTLNESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISE 480
                   S  +     +    V++   P SE
Sbjct: 609 TREGADLGSMPVAQFAEFLAQAVSRRGRPDSE 640


>gi|297160648|gb|ADI10360.1| glycyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 460

 Score = 43.3 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 27/94 (28%), Gaps = 5/94 (5%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQG 436
           V +  +  +     K +     LR    I        +   G + +  D    P  +   
Sbjct: 367 VAVLPLSRNPQLSPKAKGLATDLRKHWNI----EFDDAGAIGRRYRRQDEIGTPFCVTVD 422

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                   + +++    K+    +   +S+   R
Sbjct: 423 FDTLEDNAVTVRERDTMKQERVSLDQIQSYLGGR 456


>gi|15616745|ref|NP_239957.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134938|sp|P57225|SYT_BUCAI RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|25292947|pir||C84944 threonine-tRNA ligase (EC 6.1.1.3) [imported] - Buchnera sp.
           (strain APS)
 gi|10038808|dbj|BAB12843.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 642

 Score = 43.3 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 41/361 (11%), Positives = 90/361 (24%), Gaps = 10/361 (2%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           +          +         +       +  +   + V             +       
Sbjct: 255 HMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDKLIWKQSGHWDNYK 314

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           + +     +  +Y I   N      I         D                   L G+ 
Sbjct: 315 NAIFTTLSEHREYCIKPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSLHGL- 373

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     + SE  D +     +       ++   +        G + L
Sbjct: 374 MRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYSTFHFKKILVKLSTRPEKRIGTDSL 433

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              SE         N +        G  Y     +  +      N +   +         
Sbjct: 434 WNESEKDLSDMLIENHLSFEYQSGEGAFYGPKIEF-ILQDSLDRNWQCGTIQLDFYLPLR 492

Query: 333 RYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSL 390
                ++    + VP       +G     + +   E S N    + PV +  +     S 
Sbjct: 493 LSSFYINEKNEKKVPVIIHRAILGSIERFIGILIEECSGNLPTWLSPVQVVIISITDISS 552

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +   +      IR E  L  ++  G +++    R  P  +I G  E S   + +++ 
Sbjct: 553 GYVKELFKKFSDVNIRIECDL-RNEKIGFKIREHTLRRIPYILICGEKESSSKKISVRNR 611

Query: 451 A 451
            
Sbjct: 612 Q 612



 Score = 42.1 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 3/161 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   I N + + +R   + Y ++ ++TPLL     + K     D  
Sbjct: 256 MQEESP-GMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDK-LIWKQSGHWDNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+   +  +   ++        +       +                 +       
Sbjct: 314 KNAIFTTLSEH-REYCIKPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
                +     +       ++   + D ++ +    + +H 
Sbjct: 373 LMRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYSTFHF 413


>gi|15602458|ref|NP_245530.1| threonyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431883|sp|P57857|SYT_PASMU RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|12720863|gb|AAK02677.1| ThrS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 643

 Score = 43.3 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 41/342 (11%), Positives = 90/342 (26%), Gaps = 8/342 (2%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     + SE    +     I        
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEDQIESEVTACIKMVYDIYSTFGFEN 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E    +  + N ++       G  Y     +       
Sbjct: 416 IQVKLSTRPEKRIGADEMWDRAEAGLAAALSHNGLEYEIQEGEGAFYGPKIEFALRDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    +       G      V+    +  P       +G     + + + E +    
Sbjct: 476 REWQCG-TIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P     M+         Q   + L  AG+R +  L  ++  G +++    R  P  
Sbjct: 535 AWLAPTQAIVMNITDSQSDYVQKVVKTLSDAGLRVKSDL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           ++ G  E   G + ++     K         E + +    Q+
Sbjct: 594 LVCGDKEIEAGKVAVR---TRKGADLGTFTIEEFLDILKKQV 632



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/152 (7%), Positives = 39/152 (25%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 GDLMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     + ++   +   ++ V
Sbjct: 373 LMRVRGFTQDDAHIFCTEDQIESEVTACIKMV 404


>gi|331267089|ref|YP_004326719.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683761|emb|CBZ01379.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 617

 Score = 43.3 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 43/140 (30%), Gaps = 5/140 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +       +       ++   G  R    
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQ-PKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMM 150
              D     A     ++   
Sbjct: 156 IMKDGYSFHANYDSLDVTYD 175



 Score = 37.9 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +     N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLE 612


>gi|260170261|ref|ZP_05756673.1| prolyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315918623|ref|ZP_07914863.1| prolyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313692498|gb|EFS29333.1| prolyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 497

 Score = 43.3 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 13/213 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  E   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYGEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKMEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + L    +K +     L+  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 DEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +++      ++ +   +  E++ +  + +
Sbjct: 372 ENNTMEVMRRDTLEKETVTCEGIETYVQNLLEE 404


>gi|182438813|ref|YP_001826532.1| glycyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326779468|ref|ZP_08238733.1| glycyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|178467329|dbj|BAG21849.1| putative glycyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326659801|gb|EGE44647.1| glycyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 460

 Score = 43.3 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 18/229 (7%), Positives = 53/229 (23%), Gaps = 13/229 (5%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-----IVRGLEYYTGCV 306
           M + +         E+         E +      +  I+                     
Sbjct: 231 MDQRWNWYTDLGMREENMRWFEHPKEKLSHYSKRTADIEYRFRFGGSEWGELEGVANRTD 290

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV----AL 362
           Y+            +     +      Y    +   G+ + A      +          +
Sbjct: 291 YDLKAHSEASGTDLQFYDQEANERWTPYVIEPAAGVGRAMLAFLLDAYVEDEAPNAKGVM 350

Query: 363 KSLESSTNNIK-EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +       + +     V +  +  +     K +     LR      E     +   G + 
Sbjct: 351 EKRTVMRLDHRLAPVKVAVLPLSRNPQLSPKAKGLAADLRK-NWNIEFD--DAGAIGRRY 407

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           +  D    P  +           + +++    K+    +   +++  +R
Sbjct: 408 RRQDEIGTPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQIQAYLGSR 456


>gi|145298933|ref|YP_001141774.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166223317|sp|A4SMA4|SYT_AERS4 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|142851705|gb|ABO90026.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 642

 Score = 43.3 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+   +         + L  AG+RA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 543 VVMNITDNQADYAVKVAKALNDAGLRAKADL-RNEKIGFKIREHTLKRVPFMLVCGDKEV 601

Query: 441 SRGMLQIK 448
             G + ++
Sbjct: 602 EAGKIAVR 609



 Score = 40.6 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 13/167 (7%), Positives = 44/167 (26%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR   + Y +  ++ P       L +     ++ 
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGP-FMMDRVLWERSGHWEKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 AQAMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   ++  +  V      +       K
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIMEEVSACIRMVYDVYGTFGFENIVVK 419


>gi|90417311|ref|ZP_01225237.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90330896|gb|EAS46159.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 642

 Score = 43.3 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 45/362 (12%), Positives = 92/362 (25%), Gaps = 13/362 (3%)

Query: 108 TYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHI 167
              I    RN++   G         VD           +    M                
Sbjct: 273 YSAIEEYMRNKQREQGYQEIKTPQIVDMSLWEKSGHADKFGDDMFSLQTDDRNYAVKPMN 332

Query: 168 GINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFT 227
              + ++ +  L+        +L E     R        G+  V+        D++  F 
Sbjct: 333 CPCHVQVFNQGLKSY-RDLPLRLAEFGSCHRNEPSGSLHGIMRVRS----FTQDDAHIFC 387

Query: 228 KGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSN 287
               +  E    +     +  +    E+   +        G +E    +E     G   +
Sbjct: 388 TEEQIQPEVSQFIDFLHEVYADFGFDEIIYRLSTRPPERVGSDEDWDRAE--EALGQALD 445

Query: 288 RIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP 347
              +    + G   + G   E  L   +    Q   +       GR D       G    
Sbjct: 446 AKSLPWQELPGEGAFYGPKIEFSLKDCIGRVWQLGTIQVDFSMPGRLDAQYVAEDGARKV 505

Query: 348 AT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403
                        R I  L                 +     D+ +    Q   + L+  
Sbjct: 506 PVMLHRAILGSFERFIGILIEQYEGAFPFWLAPEQAVVANITDAQA-EYAQEVAKSLQNK 564

Query: 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
           G R    L  ++  G +++    +  P  ++ G  E+    + ++        S  ++  
Sbjct: 565 GFRVNCDL-RNEKIGFKIRGHSMQRVPFILVVGDNEKESRTVAVRTRDGKDLGSLPLEQV 623

Query: 464 ES 465
           E+
Sbjct: 624 EA 625



 Score = 42.5 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 48/159 (30%), Gaps = 3/159 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G      K   + + I + +RN     G+  I+TP +       K     D+ 
Sbjct: 255 MQEEAP-GSIFWHPKGWSVYSAIEEYMRNKQREQGYQEIKTPQIVDMSLWEKS-GHADKF 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +FSLQ  D +  +++        +   +   +                 +       
Sbjct: 313 GDDMFSLQT-DDRNYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLHG 371

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDY 165
                      +     + ++   ++  ++ +     D+
Sbjct: 372 IMRVRSFTQDDAHIFCTEEQIQPEVSQFIDFLHEVYADF 410


>gi|45658196|ref|YP_002282.1| glycyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|59798554|sp|Q72PW7|SYG_LEPIC RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|45601438|gb|AAS70919.1| glycyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 464

 Score = 43.3 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 9/91 (9%), Positives = 23/91 (25%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +        K +     L   G    +        G + +  D    P  I      
Sbjct: 376 VFPLMKKDGLPEKSREIFADLSKLG---NIEYDDGGAIGKRYRRQDEIGTPFCITVDYDT 432

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + +++     +    +   ++W   R
Sbjct: 433 LKDNTVTVRERDSMSQERIAVNQLKNWLFER 463


>gi|229591579|ref|YP_002873698.1| threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259516637|sp|C3JZN7|SYT_PSEFS RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229363445|emb|CAY50645.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 11/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPNGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q ++ +  +++        +   +   +                 +              
Sbjct: 320 QSEN-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEEQMQAESAAFI 400



 Score = 37.1 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 43/392 (10%), Positives = 102/392 (26%), Gaps = 18/392 (4%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
            V  + +         +     + E  G    +     D      S   A+        +
Sbjct: 262 MVFWHPNGWTLYQVLEQYMRKVQREN-GYLEIKTPQVVDRSLWEKSGHWANY-----ADN 315

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD--DKLNERLIVLRAIDKLDKFGLQGV 211
                   R+     +N    +    + +  + +   +L E     R        G+  V
Sbjct: 316 MFTTQSENRDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRV 375

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           +        D++  F     + +E    +   + +  +    E+   +        G +E
Sbjct: 376 RG----FTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDFGFTEVEMKLSTRPEKRVGSDE 431

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSV 328
           L   +E    +  +S  +        G  Y     +        + +             
Sbjct: 432 LWDRAEAALAAALDSAGLAYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIR 491

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
            G        SR     +           + + ++  E +              M+    
Sbjct: 492 LGAEYVSEDNSRKHPVMLHRAILGSFERFVGILIEHYEGAFPAWLAPTQA--VIMNITDK 549

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                    + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 550 QADFAAEVEKTLNESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISE 480
                   S  +     +    V++   P SE
Sbjct: 609 TREGADLGSMPVAQFAEFLAQAVSRRGRPDSE 640


>gi|28948883|pdb|1NJ1|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus Bound To Cysteine
           Sulfamoyl Adenylate
 gi|28948884|pdb|1NJ2|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus
 gi|28948885|pdb|1NJ5|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus Bound To Proline
           Sulfamoyl Adenylate
 gi|28948886|pdb|1NJ6|A Chain A, Crystal Structure Of Prolyl-Trna Synthetase From
           Methanothermobacter Thermautotrophicus Bound To Alanine
           Sulfamoyl Adenylate
          Length = 501

 Score = 43.3 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 68/213 (31%), Gaps = 19/213 (8%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
             +   V       N + I   I R   +      E  + F  +    K +  G+V   G
Sbjct: 201 EQVERAVEIYKEFFNSLGIPYLITRRPPWDKFPGSEYTVAFDTLMPDGKTLQIGTVHNLG 260

Query: 333 R---------YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTM 383
           +         ++      +  +    G S  +   ++A+   ES      ++    +  +
Sbjct: 261 QTFARTFEIKFETPEGDHEYVHQTCYGLSDRVIASVIAIHGDESGLCLPPDVAAHQVVIV 320

Query: 384 DH-DSDSLSKYQMYTQMLR----TAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQG 436
                 +  +     + LR     AG R  +     ++     KY +   R  PL +  G
Sbjct: 321 PIIFKKAAEEVMEACRELRSRLEAAGFRVHLD---DRDIRAGRKYYEWEMRGVPLRVEIG 377

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             +  +G   I     G++++ +++  E     
Sbjct: 378 PRDLEKGAAVISRRDTGEKVTADLQGIEETLRE 410


>gi|330967298|gb|EGH67558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 11/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q +  +  +++        +   +   +                 +              
Sbjct: 320 QSES-RDYAIKPMNCPCHVQVFNQGLKSYRELPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|189239987|ref|XP_001808672.1| PREDICTED: similar to DNA polymerase subunit gamma-2, mitochondrial
           precursor (Mitochondrial DNA polymerase accessory
           subunit) (PolG-beta) (MtPolB) (DNA polymerase gamma
           accessory 55 kDa subunit) (p55) [Tribolium castaneum]
 gi|270011807|gb|EFA08255.1| hypothetical protein TcasGA2_TC005883 [Tribolium castaneum]
          Length = 324

 Score = 43.3 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 1/87 (1%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKN-FGNQLKYADRRNCPLAIIQGTGERSRGML 445
           ++         + LR   I       S KN    Q K  D+   P  ++        G++
Sbjct: 236 NELKDLAVYLCRQLRKNHISCLYLPSSYKNTLDFQWKQYDQLGVPYNVLLNEKTLKNGIV 295

Query: 446 QIKDLAKGKELSREIKNNESWREARVA 472
            ++      +    + +   + E    
Sbjct: 296 FLRSRDTTLKEQVHVADLAPYVEKLFK 322


>gi|45190586|ref|NP_984840.1| AEL021Cp [Ashbya gossypii ATCC 10895]
 gi|44983528|gb|AAS52664.1| AEL021Cp [Ashbya gossypii ATCC 10895]
          Length = 670

 Score = 43.3 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 71/258 (27%), Gaps = 39/258 (15%)

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
             E     +  E+  +E++ I +   +       + +        E + G  +   +   
Sbjct: 322 WQEGHTAHLTKEEATDEVMQILDHYEQVYVELLAVPVVKGTKTENEKFAGADFTTSVEGY 381

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL------------ 362
           +    +      S   G  +  + +      +      +   +    L            
Sbjct: 382 IPQTGRGIQGATSHHLGQNFSKMFNICVENPLGPQHPKVHAYQNSWGLSTRSIGVMVMTH 441

Query: 363 -KSLESSTNNIKEMGPVLITTMDHDSDSLSK--------YQMYTQMLRTAGIRAEMFLGS 413
             +             V+I  +   + +            +     L  AGIR       
Sbjct: 442 SDNKGLVIPPRVAQHQVVILPVGITAKTKEDVRSKIHDSARAIENRLHKAGIRVLGDYAD 501

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
           +   G +    + +  PL +  G  +  +  +                   + R    A+
Sbjct: 502 NYTPGWKFAQYELKGVPLRLEFGPKDMEKAQVT------------------AVRRNDGAK 543

Query: 474 ITIPISELVSTVKKILQE 491
           I++P+++L   + +IL E
Sbjct: 544 ISVPLADLEERIPQILDE 561


>gi|26989188|ref|NP_744613.1| threonyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|38258320|sp|Q88K27|SYT_PSEPK RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|24984027|gb|AAN68077.1|AE016439_12 threonyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|313499446|gb|ADR60812.1| ThrS [Pseudomonas putida BIRD-1]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 60/231 (25%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    ++   +    A   G  EL   +E   
Sbjct: 381 DDAHIFCTEDQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTRPAKRVGSEELWDRAETAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ---KPVVFGSVGGGGRYDGL 337
               N + ++       G  Y     +          +                      
Sbjct: 441 ADALNESGLEWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR +   +           + + ++                   M+             
Sbjct: 501 NSRVRPVMLHRAILGSFERFIGMLIEHYAGVFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KSLNGSGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVETQTVAVR 608



 Score = 38.3 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 35/142 (24%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  I+TP +     L +         + +F+ 
Sbjct: 261 GMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDR-ILWERSGHWSNYAENMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +  +  +++        +   +   +                 +              
Sbjct: 320 SSES-RDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + ++    AD +
Sbjct: 379 VQDDAHIFCTEDQVKKEAADFI 400


>gi|300122461|emb|CBK23032.2| Glycyl-tRNA synthetase [Blastocystis hominis]
          Length = 686

 Score = 43.3 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 6/77 (7%)

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSR-----GMLQIKDLAKGKELSREIKNNESWR 467
           SS + G +   AD    P A+                + +++    K++   I++     
Sbjct: 602 SSASIGRRYARADEIGIPFAVTIDFETVDEKSELFNTVTLRERDSMKQVRLPIEDVAVVV 661

Query: 468 EARVAQITIPISELVST 484
              V + T+   +L+  
Sbjct: 662 NDIVKERTV-WEDLLEK 677


>gi|28869575|ref|NP_792194.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213970495|ref|ZP_03398622.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384174|ref|ZP_07232592.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302132643|ref|ZP_07258633.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|38258312|sp|Q883H9|SYT_PSESM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|28852817|gb|AAO55889.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213924666|gb|EEB58234.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|330876789|gb|EGH10938.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|331016139|gb|EGH96195.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 640

 Score = 43.3 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 11/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q +  +  +++        +   +   +                 +              
Sbjct: 320 QSES-RDYAIKPMNCPCHVQVFNQGLKSYRELPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400



 Score = 38.7 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 62/231 (26%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     + +E    +   L +  +    ++   +        G +EL   +E   
Sbjct: 381 DDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAESAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSVGGGGRYDGL 337
            S  +S  +        G  Y     +        + +                      
Sbjct: 441 ASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR     +           + + ++  E +              M+             
Sbjct: 501 NSRKNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQA--VIMNITDKQADFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KTLAESGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVEMQTVAVR 608


>gi|187918269|ref|YP_001883832.1| prolyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|119861117|gb|AAX16912.1| prolyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 491

 Score = 43.3 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 30/240 (12%), Positives = 68/240 (28%), Gaps = 18/240 (7%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        ++   E    L +    V             +   +     +    EA+
Sbjct: 159 WQEGHTAHETAKEALEETLFILNLYKRFVEDYLAIPVFCGQKTEREKFAGAVSTYTIEAL 218

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G            ++    +          +RLI AL      + 
Sbjct: 219 MQDKKALQAGTSHYLGLNFAKAFDVKFQNKKGEMDYVFATSWGVSTRLIGALIMVHSDNK 278

Query: 366 ESSTNNIKEMGPVLITTM-----DHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
                       ++I  +     D +   L    +   +L+ A  R E+      + G +
Sbjct: 279 GLILPPKIAPIEIIIVPIFKRDGDANQKILEYSIIIFNLLKEAKFRVELDRDVKNSPGFR 338

Query: 421 LKYADRRNCPLAIIQGTGERSRGMLQI----KDLAKGKELSREIKNNESWREARVAQITI 476
              A+ +  P+ I  G+ +     + +    KD     ++S E  +++   E  + Q  +
Sbjct: 339 FAAAELKGIPIRIEIGSNDIFMNCVTVARRDKDKNSKYQVSVEELSSKIRHELDIMQCEL 398



 Score = 37.1 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 4/87 (4%)

Query: 3   KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
           K   +     +G          I  RI   + + ++  G +    PLL   + L +    
Sbjct: 25  KAKLIDYSPVKGCMVIMPYGYAIWERIKSILDDKFKETGHENAYFPLLIPYEFLEREKEH 84

Query: 63  EDRPNKGVFSLQDDDGQWIS----LRY 85
               +  +  +    G+ ++    LR 
Sbjct: 85  VKGFSPELAVITTAGGEELAEPLVLRP 111


>gi|312875916|ref|ZP_07735906.1| glycyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797397|gb|EFR13736.1| glycyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 434

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 22/64 (34%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +    S + G + +  D    P  I           + I+D    +++   IK    + E
Sbjct: 368 VQYDESGSIGKRYRRQDEIGTPFGITVDYQTLEDETVTIRDRDTMEQVRVHIKEIIPYLE 427

Query: 469 ARVA 472
            R+ 
Sbjct: 428 ERIE 431


>gi|293364306|ref|ZP_06611032.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702728|ref|ZP_07639680.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317152|gb|EFE57579.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623844|gb|EFO02829.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 617

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 43/140 (30%), Gaps = 5/140 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +       +       ++   G  R    
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQ-PKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMM 150
              D     A     ++   
Sbjct: 156 IMKDGYSFHANYDSLDVTYD 175



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDEEAQTLTEKLEASLMGAGYEVLTDDRNER-IGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +   + N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHVDNLLETLE 612


>gi|289613106|emb|CBI59922.1| unnamed protein product [Sordaria macrospora]
          Length = 733

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQ 435
           VLI  +    +     +  +Q LR+ GI + +   SS + G   +YA  D    P  +  
Sbjct: 613 VLIVPLSSKDEFAPHVRRLSQKLRSVGISSRVD-DSSASIGR--RYARNDELGTPFGLTI 669

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                  G   +++    +++  E        +A
Sbjct: 670 DFQTLQDGTFTLRERDSTRQVRAEEAKIVDAIKA 703


>gi|160890380|ref|ZP_02071383.1| hypothetical protein BACUNI_02821 [Bacteroides uniformis ATCC 8492]
 gi|270296935|ref|ZP_06203134.1| prolyl-tRNA synthetase [Bacteroides sp. D20]
 gi|317479089|ref|ZP_07938230.1| prolyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156860112|gb|EDO53543.1| hypothetical protein BACUNI_02821 [Bacteroides uniformis ATCC 8492]
 gi|270272922|gb|EFA18785.1| prolyl-tRNA synthetase [Bacteroides sp. D20]
 gi|316904745|gb|EFV26558.1| prolyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 497

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 64/209 (30%), Gaps = 13/209 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V +E   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYAEFAEKYMAVPVVKGVKSANERFAGALNTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQLKYADR--RNCPLAIIQGTGER 440
           ++ L+K           L++ GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 AEMLAKIDEKVAGIVAKLKSMGISVKYDNADNKRPG--FKFADYEVKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREA 469
               ++I      ++ +R  +  E + + 
Sbjct: 372 ENNTMEIMRRDTLEKETRSCEGIEEYVKD 400


>gi|85084305|ref|XP_957291.1| glycyl-tRNA synthetase 1 [Neurospora crassa OR74A]
 gi|28918380|gb|EAA28055.1| glycyl-tRNA synthetase 1 [Neurospora crassa OR74A]
          Length = 663

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQ 435
           VLI  +   ++     +  +Q LR+ GI + +   SS + G   +YA  D    P  +  
Sbjct: 543 VLIVPISSKAEFAPHVRRLSQKLRSVGISSRVD-DSSASIGR--RYARNDELGTPFGLTI 599

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
                  G   +++    +++  E +      +A
Sbjct: 600 DFQTLQDGTFTLRERDSTRQVRAEEEKIVDAIKA 633


>gi|325854993|ref|ZP_08171709.1| proline--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325483971|gb|EGC86911.1| proline--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 493

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 70/257 (27%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L V ++   K         + S   R          EA+
Sbjct: 173 WQEGHTAHATREEAEKEAQTMLHVYADFAEKWLAVPVVQGVKSETERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           +++               +RLI AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKSFDVTYLNKDNKPEYVWATSWGVSTRLIGALIMTHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V I  +    + L    +K Q     LR  GI  +     +K  G   
Sbjct: 293 GLVLPPRIAPIQVAIIPIFKGEEQLKEITAKLQPVIDQLRELGITVKYDDSDNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+AD   +  P+ +  G  +     +++                   R   + +  +   
Sbjct: 351 KFADYELKGVPVRLAMGGRDLQDNTIEV------------------MRRDTLEKENVSFD 392

Query: 480 ELVSTVKKILQENKEEI 496
            +V  VK +L + ++ I
Sbjct: 393 GIVGRVKSLLDDIQDNI 409


>gi|325957052|ref|YP_004292464.1| prolyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333617|gb|ADZ07525.1| prolyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 565

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    I    +      +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAEAIIEQEMDRINVPEMIMPHLLPA-TLWQESGRYKKYGPEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           +D  G+   L    + T      +A+N  +             
Sbjct: 97  KDRHGRESLLGPTHEET--FTEIIAKNLKSYKQMPMALYQIQT 137


>gi|291520560|emb|CBK75781.1| glycyl-tRNA synthetase, dimeric type [Butyrivibrio fibrisolvens
           16/4]
          Length = 397

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 28/102 (27%), Gaps = 3/102 (2%)

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNC 429
           +    + PV I  +          +     L +     E         G + +  D    
Sbjct: 297 HFHPALAPVKIGVLPLSKKLNEGAEKVFAEL-SKKYNCEFD--DRGTIGKRYRRMDEIGT 353

Query: 430 PLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARV 471
           P  I          M+ I+     ++    I + +++   + 
Sbjct: 354 PFCITYDFDSEEDHMVTIRHRDSMEQERIAIADLDAYFADKF 395


>gi|255532798|ref|YP_003093170.1| prolyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255345782|gb|ACU05108.1| prolyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 490

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/244 (10%), Positives = 64/244 (26%), Gaps = 20/244 (8%)

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                      A E+    L V ++   +         + +   R          EA++ 
Sbjct: 171 EGHTAHATADEAVEETRKMLDVYADFAEQWMAVPVVKGVKTPNERFAGALDTYCIEALMQ 230

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLES 367
                +       G            ++               +RL+ AL          
Sbjct: 231 DGKALQAGTSHFLGQNFAKAFDVKFTNKEGKIEHVWASSWGVSTRLMGALIMAHSDDAGL 290

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQ----MYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                     V+I  +    + L             L+  GI  +     ++  G +   
Sbjct: 291 VLPPKLAPIQVVIVPIYKHEEELKNITGFVDELIAKLKRMGISVKYDDRDTQRPGFKFAE 350

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            + +  P+ +  G  +   G +++      ++ +      E +           I++L+ 
Sbjct: 351 YELKGVPVRLAIGGRDMENGTVELARRDTREKQTVLQDGLEIF-----------IAQLLE 399

Query: 484 TVKK 487
            +++
Sbjct: 400 EIQE 403


>gi|58337540|ref|YP_194125.1| prolyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227904181|ref|ZP_04021986.1| prolyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|81311450|sp|Q5FJN0|SYP_LACAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|58254857|gb|AAV43094.1| prolyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227868200|gb|EEJ75621.1| prolyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 565

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    I    +N     +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAESIIEQEMDNINVPEMMMPHLLPA-TLWQESGRYQKYGAEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           +D  G+   L    + T      +A+N  +             
Sbjct: 97  KDRHGRESLLGPTHEET--FTEIIAKNLKSYKQMPLALYQIQT 137


>gi|15678639|ref|NP_275754.1| prolyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|3334356|sp|O26708|SYP_METTH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|2621691|gb|AAB85117.1| prolyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 482

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 68/213 (31%), Gaps = 19/213 (8%)

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
             +   V       N + I   I R   +      E  + F  +    K +  G+V   G
Sbjct: 181 EQVERAVEIYKEFFNSLGIPYLITRRPPWDKFPGSEYTVAFDTLMPDGKTLQIGTVHNLG 240

Query: 333 R---------YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTM 383
           +         ++      +  +    G S  +   ++A+   ES      ++    +  +
Sbjct: 241 QTFARTFEIKFETPEGDHEYVHQTCYGLSDRVIASVIAIHGDESGLCLPPDVAAHQVVIV 300

Query: 384 DH-DSDSLSKYQMYTQMLR----TAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQG 436
                 +  +     + LR     AG R  +     ++     KY +   R  PL +  G
Sbjct: 301 PIIFKKAAEEVMEACRELRSRLEAAGFRVHLD---DRDIRAGRKYYEWEMRGVPLRVEIG 357

Query: 437 TGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
             +  +G   I     G++++ +++  E     
Sbjct: 358 PRDLEKGAAVISRRDTGEKVTADLQGIEETLRE 390


>gi|85076319|ref|XP_955907.1| hypothetical protein NCU04449 [Neurospora crassa OR74A]
 gi|28916937|gb|EAA26671.1| hypothetical protein NCU04449 [Neurospora crassa OR74A]
 gi|40882172|emb|CAF05998.1| probable proline-tRNA ligase [Neurospora crassa]
          Length = 558

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 383 MDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
            +     + K       L+ AG+RA++          +    + +  PL I  G  + ++
Sbjct: 354 AEEKDAHMKKVDELLATLKKAGVRADVDTREGYTPAWKFNDWELKGVPLRIEFGPKDAAK 413

Query: 443 GMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
            ++       G++                   TIPI+EL + V ++L+  ++++
Sbjct: 414 DVVSYARRDTGEK------------------GTIPIAELTTKVPELLETIQQDM 449


>gi|291514571|emb|CBK63781.1| glycyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 514

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/224 (7%), Positives = 42/224 (18%), Gaps = 25/224 (11%)

Query: 269 FNELVV-ISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
           +NE         R  G+  +  +                 E    F     +        
Sbjct: 282 WNEWKNTRMAWHRALGFGDDDYRFHDHDKLAHYANAATDIEYNFPFGFKEVEGIHSRTDF 341

Query: 328 VGGGGR--------YDGLVSRFKGQNVPATGFSIGISRLIVALKSLE------------- 366
             G  +        Y    +                   +  + +               
Sbjct: 342 DLGSHQKFSGKKLQYFDPETGESYVPYVVETSIGVDRMFLQVMSAAYTEQTLEGGDSRVV 401

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
                      V +  +          Q    +L               + G + +  D 
Sbjct: 402 LKFPPALAPVKVAVLPLVKKDGMPEVAQKIVDLL-KYDYNV--VYDEKDSVGKRYRRQDA 458

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              P  +         G + I+      +   +I++  +  +  
Sbjct: 459 VGTPFCVTVDGQTLEDGTVTIRHRDTMAQERVKIESLHAMVDEE 502


>gi|257439266|ref|ZP_05615021.1| glycine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257198308|gb|EEU96592.1| glycine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 275

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/245 (8%), Positives = 57/245 (23%), Gaps = 22/245 (8%)

Query: 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVI----SELVRKSGYNSNRIKISSTIVRGLE 300
            +D      +  E    ++  +K    L            ++  +       +       
Sbjct: 35  DLDWFAYWKDYCENWLLSLGIKKEHLRLRDHEPAELAFYSRATTDIEYAFPFTDWGELWG 94

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
                 Y+         +      F S         ++    G +  A  F         
Sbjct: 95  IADRTNYDLTRHQEASGKS--LEYFDSETNEHYIPYVIEPSLGCDRVALAFLCEAYDEEH 152

Query: 361 ALKSLESST-----NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK 415
            + +          +    + P     +        K       L        +    + 
Sbjct: 153 LVDAKGKEDVRTVLHLHPALAPYKCAVLPLSKKLGDKAMEIRNELSKY---FMVDYDDTG 209

Query: 416 NFGNQLKYADRRNCPLAIIQGTGER--------SRGMLQIKDLAKGKELSREIKNNESWR 467
           + G + +  D    P  I               +   + ++D    +++   I   +S+ 
Sbjct: 210 SIGKRYRREDEIGTPYCITVDFDTVGDEAKGIAADNCVTVRDRDTMEQVRMPISELKSYI 269

Query: 468 EARVA 472
           E+++ 
Sbjct: 270 ESKIE 274


>gi|327183775|gb|AEA32222.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 565

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    I    +      +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAEAIIEQEMDRINVPEMIMPHLLPA-TLWQESGRYKKYGPEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           +D  G+   L    + T      +A+N  +             
Sbjct: 97  KDRHGRESLLGPTHEET--FTEIIAKNLKSYKQMPMALYQIQT 137


>gi|315038578|ref|YP_004032146.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276711|gb|ADQ59351.1| prolyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 565

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    I    +      +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAEAIIEQEMDRINVPEMIMPHLLPA-TLWQESGRYKKYGPEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           +D  G+   L    + T      +A+N  +             
Sbjct: 97  KDRHGRESLLGPTHEET--FTEIIAKNLKSYKQMPMALYQIQT 137


>gi|229094014|ref|ZP_04225100.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228689365|gb|EEL43182.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 156

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 7/64 (10%), Positives = 22/64 (34%)

Query: 409 MFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
           +    + + G + +  D    P  I           + ++D    +++   I   + + E
Sbjct: 92  VDFDETGSIGKRYRRQDEIGTPFCITYDFDSVEDKAVTVRDRDTMEQVRMPISELKGFLE 151

Query: 469 ARVA 472
            ++ 
Sbjct: 152 KKIQ 155


>gi|28493150|ref|NP_787311.1| prolyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|81839144|sp|Q83GR4|SYP_TROWT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|28476190|gb|AAO44280.1| prolyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 613

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 10  ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKG 69
           +   G        +++R++I + IR          +  P L  +D   K           
Sbjct: 36  QTGSGIFSWMPLGLKVRHKIENIIRYEMGQVNAIEVLFPALFSADLF-KQSGRWSEYGDD 94

Query: 70  VFSLQDD 76
           +F L+D 
Sbjct: 95  IFRLKDR 101


>gi|32476484|ref|NP_869478.1| glycyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32447029|emb|CAD78935.1| glycyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 558

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 3/96 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +          Q     L+        F  +    G + +  D    P  I      
Sbjct: 466 VFPLVKKDGMPEVAQEIYGALKEH-YNV--FYDAKGAVGRRYRRQDEAGTPYCITVDGDS 522

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            +   + I+D    ++   +I +  S  ++R+   T
Sbjct: 523 LTDKTVTIRDRDTLEQTRVKIDDVVSEIQSRMKAST 558


>gi|304390915|ref|ZP_07372867.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315656296|ref|ZP_07909187.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|304325798|gb|EFL93044.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315493298|gb|EFU82898.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 461

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/97 (9%), Positives = 23/97 (23%), Gaps = 3/97 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  +    +           LR      E     +   G + +  D    P  +
Sbjct: 364 SPVKVAVLPLSRKDELPEIAHNIAAELRKH-WNVE--YDDAGAVGRRYRRQDEIGTPYCV 420

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                      + +++     +      N  ++   R
Sbjct: 421 TVDFDSLEDQAVTVRERDTMTQERIGRDNLLAYLRDR 457


>gi|296228693|ref|XP_002759920.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 2
           [Callithrix jacchus]
          Length = 588

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 37/106 (34%), Gaps = 8/106 (7%)

Query: 371 NIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCP 430
               + P  +  +   ++     +   Q L+ AG+  ++   S      +++ A   +  
Sbjct: 477 WPLWLSPFQVVVIPVGTEQEEYARETQQSLQAAGLVCDLDADSRLTLSRRIRRAQLAHYN 536

Query: 431 LAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476
              + G  E+S+  + I+        +R+ +    W      Q  +
Sbjct: 537 FQFVVGQKEQSKSTVNIR--------TRDNRLLGEWSLPEAVQRLV 574


>gi|294645076|ref|ZP_06722802.1| proline--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|292639582|gb|EFF57874.1| proline--tRNA ligase [Bacteroides ovatus SD CC 2a]
          Length = 447

 Score = 43.3 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 13/213 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  E   K         + S   R          EA++      +       G     
Sbjct: 144 LNVYGEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 203

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 204 AFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 263

Query: 387 SDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + L    +K +     L+  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 264 DEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPG--FKFADYELKGVPVRLVMGGRDL 321

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +++      ++ +   +  E++ +  + +
Sbjct: 322 ENNTMEVMRRDTLEKETVTCEGIETYVQNLLEE 354


>gi|315453026|ref|YP_004073296.1| prolyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132078|emb|CBY82706.1| prolyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 577

 Score = 43.3 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/158 (9%), Positives = 39/158 (24%), Gaps = 16/158 (10%)

Query: 13  RGFADCPTKEIRIRNRILDSIRNIYENYGFDPIET----PLLEYSDSLGKFLPDEDRPNK 68
            G         ++ ++I   ++ + ++YG          P      SL +     ++  K
Sbjct: 37  SGLYHFLPLGHKVLSKIRAVVKEVMDSYGAQECTLGFVVPA-----SLWQESGRFEQYGK 91

Query: 69  GVFSLQDDDGQWISLRY---DLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK----HG 121
            + S  D       L     +    +A+   +++  +                       
Sbjct: 92  ELLSFPDRKNNLCVLSPTHEEAITQIAKSHIKSYKQLPLNLYQIHTKFRDEIRPRFGLMR 151

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVG 159
              F               +     M    ++    +G
Sbjct: 152 AREFVMKDAYSFHASTECLDKEFERMHAAYSEIFSRLG 189


>gi|300122388|emb|CBK22959.2| unnamed protein product [Blastocystis hominis]
          Length = 680

 Score = 43.3 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 6/77 (7%)

Query: 413 SSKNFGNQLKYADRRNCPLAIIQGTGERSR-----GMLQIKDLAKGKELSREIKNNESWR 467
           SS + G +   AD    P A+                + +++    K++   I++     
Sbjct: 596 SSASIGRRYARADEIGIPFAVTIDFETVDEKSELFNTVTLRERDSMKQVRLPIEDVAVVV 655

Query: 468 EARVAQITIPISELVST 484
              V + T+   +L+  
Sbjct: 656 NDIVKERTV-WEDLLEK 671


>gi|282878742|ref|ZP_06287510.1| glycine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299133|gb|EFA91534.1| glycine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 533

 Score = 43.3 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/95 (9%), Positives = 25/95 (26%), Gaps = 3/95 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
             +  +        K +    +L               + G + +  D    P  +    
Sbjct: 413 CAVMPLVRKEGLPEKAREIVDLL---KFHFNTSYDEKDSIGKRYRRQDAVGTPYCVTVDF 469

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  + ++     ++   +I    S  E +V+
Sbjct: 470 DTLEDNKVTLRHRDTMEQQRVDISELCSVIEEKVS 504


>gi|300771444|ref|ZP_07081319.1| glycine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761433|gb|EFK58254.1| glycine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 489

 Score = 43.3 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 3/85 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           I  +        K +     L       +     +   G + +  D    P  I      
Sbjct: 391 ILPLTKKDGLPEKAREIMATL-KLDYNVQYDEKDA--IGKRYRRQDAIGTPFCITVDHQS 447

Query: 440 RSRGMLQIKDLAKGKELSREIKNNE 464
                + I+D    K+    I + E
Sbjct: 448 LEDNTVTIRDRDTMKQERVAIADLE 472


>gi|303284080|ref|XP_003061331.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457682|gb|EEH54981.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 489

 Score = 43.3 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 65/193 (33%), Gaps = 11/193 (5%)

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
               F   N K + V   S G   R  G +    G +V                 +L   
Sbjct: 234 FDTTFLDENGKTQHVHQSSWGVSTRLIGGIIMTHGDDVGLRRVLYTGPHTTALPPAL--- 290

Query: 369 TNNIKEMGPVLITTMDHDSDSL-SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
                ++  V I   + D +S+ +      + L  AG+R ++      + G +    + +
Sbjct: 291 --APIQVVVVPIAQKNKDKESVNAAASAVVKTLTDAGVRVKLDDDERNSPGWKFAQWEMK 348

Query: 428 NCPLAIIQGTGERSRGMLQI----KDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
             P+ +  G  + +     +    K   +GKE    ++ +    + R     +  S L+S
Sbjct: 349 GVPIRVEIGPKDVANDACVLARRDKPGKEGKEFGVSVEPSALVGKVRETLADV-QSALLS 407

Query: 484 TVKKILQENKEEI 496
             +    EN  ++
Sbjct: 408 EARAFRDENIVDV 420


>gi|302063985|ref|ZP_07255526.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
          Length = 590

 Score = 43.3 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q +  +  +++        +   +   +                 +              
Sbjct: 320 QSES-RDYAIKPMNCPCHVQVFNQGLKSYRELPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400


>gi|327543225|gb|EGF29659.1| glycyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 555

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 3/96 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +          Q     L+        F  +    G + +  D    P  I      
Sbjct: 463 VFPLVKKDGMPEVAQEIYGALKEH-YNV--FYDAKGAVGRRYRRQDEAGTPYCITVDGDS 519

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            +   + I+D    ++   +I +  S  ++R+   T
Sbjct: 520 LTDKTVTIRDRDTLEQTRVKIDDVVSEIQSRMKAST 555


>gi|306825925|ref|ZP_07459263.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431857|gb|EFM34835.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 617

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 56/216 (25%), Gaps = 11/216 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLAR----YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
           ++ +     L    + T   + R       +    +      YR     RN       F 
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFI 156

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                      +S +    E            G+               D          
Sbjct: 157 MKDGYSFHANYNSLDVTYDEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPA 216

Query: 187 DDKLNER---LIVLRAIDKLDKFGLQGVKLLLGEGR 219
              L+        + + D++     + +K  L +  
Sbjct: 217 RTDLDRWVVLDKSVASFDEIPAEVQEEIKAELLKWM 252



 Score = 39.8 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMEAGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +     N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLE 612


>gi|306828825|ref|ZP_07462017.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429003|gb|EFM32091.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 617

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 43/140 (30%), Gaps = 5/140 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +       +       ++   G  R    
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQ-PKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMM 150
              D     A     ++   
Sbjct: 156 IMKDGYSFHANYDSLDVTYD 175



 Score = 38.3 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNAKDEEAQALTEKLEANLMGAGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +     N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLE 612


>gi|149195154|ref|ZP_01872245.1| ATP phosphoribosyltransferase regulatory subunit [Caminibacter
           mediatlanticus TB-2]
 gi|149134706|gb|EDM23191.1| ATP phosphoribosyltransferase regulatory subunit [Caminibacter
           mediatlanticus TB-2]
          Length = 270

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 11/208 (5%)

Query: 11  LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
           +P G      K+ +I+  I      ++EN  ++ I +P   Y          E    K +
Sbjct: 7   IPDGAKLYFGKKAKIKREIEHIASEVFENEEYEEIVSPYFSYHQL-------EALNEKEL 59

Query: 71  FSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
               D + + ++LR D +  + R V +   +     + + I PVFR         +   +
Sbjct: 60  IRFTDKENRTLALRGDSSIDIIRIVLKRLKSEAK--KWFYIQPVFRA--PSTEINQIGAE 115

Query: 131 CDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKL 190
               ++     T       +       +   +    +       LD I         +K 
Sbjct: 116 YLEGDLVEVLNTNLNIFKRLNKHYPLIISHIQIPQIVCELTDLSLDDIKHMRVYKFKEKW 175

Query: 191 NERLIVLRAIDKLDKFGLQGVKLLLGEG 218
            + L+ +   D   K   + +   L E 
Sbjct: 176 LKELVKIDNKDINLKLFPKEIAKHLKEM 203


>gi|119355895|ref|YP_910539.1| glycyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119353244|gb|ABL64115.1| glycyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 489

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/90 (10%), Positives = 22/90 (24%), Gaps = 3/90 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +   K       LR       +    + + G + +  D    P  +      
Sbjct: 400 VLPLLKKGEMAEKAARIADDLRQL---YMIQQDDAGSIGKRYRRQDEIGTPFCLTIDHET 456

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREA 469
                L I+      +      +   +  A
Sbjct: 457 LENDTLTIRHRDTASQERISASSIREFLAA 486


>gi|117621181|ref|YP_856850.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166223316|sp|A0KKP9|SYT_AERHH RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|117562588|gb|ABK39536.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 642

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+   +         + L  AG+RA+  L  ++  G +++    +  P  ++ G  E 
Sbjct: 543 VVMNITDNQADYAVKVAKALNDAGLRAKADL-RNEKIGFKIREHTLKRVPFMLVCGDKEV 601

Query: 441 SRGMLQIK 448
             G + ++
Sbjct: 602 EAGKIAVR 609



 Score = 40.6 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 13/167 (7%), Positives = 44/167 (26%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR   + Y +  ++ P       L +     ++ 
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGP-FMMDRVLWERSGHWEKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
            + +F+ Q ++ +  +++        +   +   +                 +       
Sbjct: 314 AQAMFTTQSEN-REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   ++  +  V      +       K
Sbjct: 373 LMRVRGFTQDDAHIFCTEEQIMEEVSACIRMVYDVYGTFGFENIVVK 419


>gi|296110429|ref|YP_003620810.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295831960|gb|ADG39841.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 571

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+ N+I   IR    N   + +  P +  ++   K           ++  
Sbjct: 38  GMFSYLPLAKRVLNKIEQIIREEMANIDANEMLVPEVLPAELWQKS-GRYATYGPDLYKF 96

Query: 74  QDDDGQWISLRY 85
           ++   +   L  
Sbjct: 97  KNRQDRDFILGP 108


>gi|146276901|ref|YP_001167060.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166225490|sp|A4WQU1|SYT_RHOS5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|145555142|gb|ABP69755.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 646

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 35/117 (29%), Gaps = 7/117 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         +I   + D +R      G+  I TP +     L +     +   + +F +
Sbjct: 266 GMVFWHPNGWQIYRTLEDYMRGRLRKAGYKEIRTPQVVDRK-LWEASGHWEAYKENMFLV 324

Query: 74  Q-----DDDGQWISLRYDLTAPLARYVAENFDTIVF-PCRTYRIGPVFRNEKHGPGR 124
           +       + +  +L+        +   +   +    P R    G   R E  G   
Sbjct: 325 EVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRYESSGSMH 381



 Score = 41.4 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 41/337 (12%), Positives = 88/337 (26%), Gaps = 29/337 (8%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDD--KLNE 192
              S    A  E   ++    E    KR +    +N    +    + +  + D   +L E
Sbjct: 308 WEASGHWEAYKENMFLVEVEEEHAKEKRINALKPMNCPCHVQVYNQGLKSYRDLPLRLAE 367

Query: 193 RLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSM 252
                R        GL  V+        D++  F     +  E    +    S+  +   
Sbjct: 368 FGSCHRYESSGSMHGLMRVRG----FVQDDAHIFCTEDQIEGECAAFIELLSSVYKDLGF 423

Query: 253 HELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
                 +        G +E     E   ++               G  Y     ++    
Sbjct: 424 DSFEIKLSTRPEVRIGSDEAWDKVETALENAIKKVGAAYEIDPGEGAFYGPKLDFKLTDA 483

Query: 313 FPVMNEKQK---PVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESST 369
                +           +  G        ++ +   +           + + +++     
Sbjct: 484 IGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHRPYMLHRAILGSFERFIGILIENYAGKL 543

Query: 370 NNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK--------NFGNQL 421
                   V++ ++  D+D           LR  G+RAE    + K        + G   
Sbjct: 544 PFWLAPRQVVVASIVSDAD--PYVAEVVAALRARGVRAEADTRNEKINYKVREHSVGK-- 599

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDL-AKGKELS 457
                   P+ +  G  E     + ++ L   G E +
Sbjct: 600 -------VPVILAIGMQEVEGRTVSVRRLGETGTESA 629


>gi|148548433|ref|YP_001268535.1| threonyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166225483|sp|A5W5E1|SYT_PSEP1 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|148512491|gb|ABQ79351.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas
           putida F1]
          Length = 640

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 60/231 (25%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    ++   +    A   G  EL   +E   
Sbjct: 381 DDAHIFCTEEQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTRPAKRVGSEELWDRAETAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ---KPVVFGSVGGGGRYDGL 337
               N + ++       G  Y     +          +                      
Sbjct: 441 ADALNESGLEWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR +   +           + + ++                   M+             
Sbjct: 501 NSRVRPVMLHRAILGSFERFIGMLIEHYAGVFPAWLAPTQA--VIMNITDKQTDFALEVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KSLNGSGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVETQTVAVR 608



 Score = 38.3 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 35/142 (24%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  I+TP +     L +         + +F+ 
Sbjct: 261 GMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDR-ILWERSGHWSNYAENMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +  +  +++        +   +   +                 +              
Sbjct: 320 SSES-RDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + ++    AD +
Sbjct: 379 VQDDAHIFCTEEQVKKEAADFI 400


>gi|298345360|ref|YP_003718047.1| glycine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|315655778|ref|ZP_07908676.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii ATCC
           51333]
 gi|298235421|gb|ADI66553.1| glycine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|315489842|gb|EFU79469.1| glycyl-tRNA synthetase beta subunit [Mobiluncus curtisii ATCC
           51333]
          Length = 457

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/97 (9%), Positives = 23/97 (23%), Gaps = 3/97 (3%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
               V +  +    +           LR      E     +   G + +  D    P  +
Sbjct: 360 SPVKVAVLPLSRKDELPEIAHNIAAELRKH-WNVE--YDDAGAVGRRYRRQDEIGTPYCV 416

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                      + +++     +      N  ++   R
Sbjct: 417 TVDFDSLEDQAVTVRERDTMTQERIGRDNLLAYLRDR 453


>gi|162447800|ref|YP_001620932.1| glycyl-tRNA synthetase, class II [Acholeplasma laidlawii PG-8A]
 gi|161985907|gb|ABX81556.1| glycyl-tRNA synthetase, class II [Acholeplasma laidlawii PG-8A]
          Length = 456

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 3/83 (3%)

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +   K +   +ML       ++    ++N G + +  D    P  I           + 
Sbjct: 373 KEHSQKAREIHEMLSEN---LDVVYDETQNIGKRYRRQDAIGTPFCITVDHQTMDDDTVT 429

Query: 447 IKDLAKGKELSREIKNNESWREA 469
           I+     ++    IK+ E + + 
Sbjct: 430 IRHRDSMEQSRIAIKDIEQFIQQ 452


>gi|238898885|ref|YP_002924567.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259516538|sp|C4K776|SYT_HAMD5 RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|229466645|gb|ACQ68419.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 638

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/330 (11%), Positives = 86/330 (26%), Gaps = 10/330 (3%)

Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
             +          +                +    +   R      +N    L+   + +
Sbjct: 286 KEYEYQEVKGPFMMDRVLWEKTGHWENYSENMFTTLSENREYCIKPMNCPGHLEIFKQGL 345

Query: 183 GLHGDDKLNERLI--VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
             + D  L         R        GL  V+        D++  F     +  E  + +
Sbjct: 346 KSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRG----FTQDDAHIFCTEKQVRKEVSNCI 401

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
                I       ++   +        G +E+   +E    S      I        G  
Sbjct: 402 KMTYDIYQTFGFKKIAVKLSTRPEKRIGSDEIWTQAEEDLASVLKEQGITFELQPGEGAF 461

Query: 301 YYTGCVYEAILGFPVMNEKQ--KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           Y     +          +    +      V     Y    S  +   +        I R 
Sbjct: 462 YGPKIEFTLYDCLDRAWQCGTVQLDFSLPVRLNAFYIDENSERQVPVMIHRAILGSIERF 521

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
           I  L    +    +  + PV +  ++         +   + L+  G+RA++ L  ++  G
Sbjct: 522 IGILTEEYAGFFPVW-LAPVQVMLINITEKQSDYVKKVAKNLQQLGVRAKVDL-RNEKIG 579

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
            +++       P  ++ G  E     + ++
Sbjct: 580 FKIRQHTLYRIPYILVCGDKEVESNQIAVR 609



 Score = 38.3 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/196 (10%), Positives = 52/196 (26%), Gaps = 10/196 (5%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   IR   + Y +  ++ P       L +     +  ++ +F+ 
Sbjct: 262 GMVFWHENGWIVFRELEILIREKLKEYEYQEVKGP-FMMDRVLWEKTGHWENYSENMFTT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             ++ +   ++             + +      ++YR  P+   E  G     +      
Sbjct: 321 LSEN-REYCIKPMNCPG-------HLEIFKQGLKSYRDLPLRMAEF-GSCHRNEPSGALH 371

Query: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193
             +     T D          +             I        I  K+    + ++   
Sbjct: 372 GLMRVRGFTQDDAHIFCTEKQVRKEVSNCIKMTYDIYQTFGFKKIAVKLSTRPEKRIGSD 431

Query: 194 LIVLRAIDKLDKFGLQ 209
            I  +A + L     +
Sbjct: 432 EIWTQAEEDLASVLKE 447


>gi|270292053|ref|ZP_06198268.1| proline--tRNA ligase [Streptococcus sp. M143]
 gi|270279581|gb|EFA25423.1| proline--tRNA ligase [Streptococcus sp. M143]
          Length = 617

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 46/123 (37%), Gaps = 6/123 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +  + +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKNIMRQEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDV 133
             +
Sbjct: 155 FIM 157



 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 2/102 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +  +     L  AG        + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDEEAQALTEKLEANLMEAGYEVLTDDRNER-VGVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE 468
              P+ I  G    + G++++K  A G  +     N     E
Sbjct: 572 IGLPIRITVGKK-AADGIVEVKIKATGDTIEVHADNLLETLE 612


>gi|327403982|ref|YP_004344820.1| glycyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319490|gb|AEA43982.1| glycyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 512

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 25/95 (26%), Gaps = 3/95 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V I  +        K       LR              + G + +  D    P  ++   
Sbjct: 414 VAIMPLTKKDGLPEKATEILNDLR---FDFNCQYDEKDSPGKRYRRQDAIGTPYCVMVDH 470

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
                  + I+D     +    I    +  + +V+
Sbjct: 471 QTLEDNTVTIRDRDTMLQERVAISELRAKIDEKVS 505


>gi|220903768|ref|YP_002479080.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254783519|sp|B8J4E4|SYT_DESDA RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|219868067|gb|ACL48402.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 647

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 32/105 (30%), Gaps = 9/105 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      K + +R  + D  R  +   G+D ++ P L   ++  K     D   + ++  
Sbjct: 264 GMVFWLPKGMLVRTILEDFWRKEHLKRGYDIVQGPQLLRVETWQKS-GHYDHYRENMY-F 321

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNE 118
              +     ++             +         +YR  P    E
Sbjct: 322 TQIEEDAYGVKPMN-------CISHMLIYGNELHSYRDLPQRYFE 359



 Score = 36.7 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
            +    +      L+T  +   +++S      + L   GIRA+     ++  G +++ A 
Sbjct: 532 GALPTWLAPEQARLLTVTEAGDEAVSSMLEEFKAL---GIRAQ-ADTRNEKLGFKVREAQ 587

Query: 426 RRNCPLAIIQGTGERSRG--MLQIKD 449
               P  ++ G  E   G   +++++
Sbjct: 588 LAKVPYILVVGEKEVQAGGANVRLRN 613


>gi|270308100|ref|YP_003330158.1| glycyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153992|gb|ACZ61830.1| glycyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 445

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 28/98 (28%), Gaps = 5/98 (5%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRA-EMFLGSSKNFGNQLKYAD 425
              +       + +  +          +     LR    +   +    S++ G + +  D
Sbjct: 337 LHLHPALAPYKIAVLPLSKKEILSDYARKIYADLR----KCWMVAYDDSQSIGRRYRRQD 392

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNN 463
               P  +         GM+ I+D     ++  ++   
Sbjct: 393 EIGTPYCVTVDFQSLEDGMVTIRDRDSMGQIRVKVSEL 430


>gi|294933722|ref|XP_002780830.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239890921|gb|EER12625.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 341

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 4/101 (3%)

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
            K +   + L   G+R  +     K  G +  + + +  PL I  G  +  +G++     
Sbjct: 143 EKCKSLYEDLNANGVRVVLDDRDDKTPGYKFNHWELKGVPLRIEVGAKDLEKGVVTFVRR 202

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
             GK+      ++   +EA  +      SEL+ T +  L++
Sbjct: 203 NTGKKSQEAEHSSVKVKEALESIQ----SELLETARAKLED 239


>gi|220912137|ref|YP_002487446.1| glycyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859015|gb|ACL39357.1| glycyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 461

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 25/92 (27%), Gaps = 5/92 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           +  +  +     K +     LR    I        +   G + +  D    P  I     
Sbjct: 370 VLPLSRNEALSPKAKDLGAQLRKNWNI----DFDDAGAIGRRYRRQDEIGTPFCITVDFD 425

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 + I++     +    +   E +  +R
Sbjct: 426 TLEDQAVTIRERDTMSQERVSLDKVEGYLASR 457


>gi|193211698|ref|YP_001997651.1| glycyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085175|gb|ACF10451.1| glycyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 489

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 7/91 (7%), Positives = 24/91 (26%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +   K +     L        +    + + G + +  D    P         
Sbjct: 400 VLPLMKKGEMAEKARQLCAALSE---SFMVQYDDAASIGKRYRRQDEIGTPFCFTVDHDT 456

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
              G + ++      +   E+     +  ++
Sbjct: 457 LENGTITVRYRDTAAQERIEMSKAAEFLASK 487


>gi|298385691|ref|ZP_06995249.1| proline--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261832|gb|EFI04698.1| proline--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 497

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 65/214 (30%), Gaps = 13/214 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V SE   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYSEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKMEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + L    +K +     L+  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 DEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
               +++      ++ +      E++ +  + +I
Sbjct: 372 ENNTMEVMRRDTLEKETVTCDGIETYVQKLLEEI 405


>gi|115305794|sp|Q7UEU9|SYG_RHOBA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
          Length = 536

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 3/96 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +          Q     L+        F  +    G + +  D    P  I      
Sbjct: 444 VFPLVKKDGMPEVAQEIYGALKEH-YNV--FYDAKGAVGRRYRRQDEAGTPYCITVDGDS 500

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
            +   + I+D    ++   +I +  S  ++R+   T
Sbjct: 501 LTDKTVTIRDRDTLEQTRVKIDDVVSEIQSRMKAST 536


>gi|256375404|ref|YP_003099064.1| glycyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255919707|gb|ACU35218.1| glycyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 461

 Score = 42.9 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR      E     +   G + +  D    P  +      
Sbjct: 370 VLPLSRNADLSPKAKDLAAALRKH-WNVEFD--DAGAIGRRYRRQDEIGTPFCVTVDFDT 426

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
            +   + +++     +    +   E +  AR
Sbjct: 427 LTDHAVTVRERDTMSQERVSMDQIEGYLAAR 457


>gi|295090762|emb|CBK76869.1| prolyl-tRNA synthetase, family I [Clostridium cf. saccharolyticum
           K10]
          Length = 477

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 53/189 (28%), Gaps = 27/189 (14%)

Query: 308 EAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLES 367
                F     K   + F       +Y    S      +      +      + L     
Sbjct: 231 GTSHNFGDGFAKAFGIQFSDKDNKLKYVHQTSWGMTTRLIGAIIMVHGDDSGLVL----- 285

Query: 368 STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRR 427
               I     V++         L K      +L  +G   ++   S K+ G +   ++ R
Sbjct: 286 -PPRIAPTQVVIVPIRQQAEGVLDKAYELKDIL--SGFSVKVD-DSDKSPGWKFSESEMR 341

Query: 428 NCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKK 487
             P+ +  G  +  +    +                   R     +IT+ + E+   V +
Sbjct: 342 GIPVRVEIGPKDLEQNQAVL------------------VRRDTHEKITVSLDEIKEKVTE 383

Query: 488 ILQENKEEI 496
           +L   + ++
Sbjct: 384 LLDTIQHDM 392


>gi|29832178|ref|NP_826812.1| glycyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|59798584|sp|Q82BR9|SYG_STRAW RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|29609296|dbj|BAC73347.1| putative glycyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 460

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 28/98 (28%), Gaps = 5/98 (5%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
               V +  +  + +   K +     LR    I        +   G + +  D    P  
Sbjct: 363 SPVKVAVLPLSRNPELSPKAKGLATALRQHWNI----EFDDAGAIGRRYRRQDEIGTPFC 418

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           +           + +++    K+    +   E +  AR
Sbjct: 419 VTVDFDTLDDNAVTVRERDSMKQERVSLDQIEGYLAAR 456


>gi|321309527|ref|YP_004191856.1| prolyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801371|emb|CBY92017.1| prolyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 467

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 78/248 (31%), Gaps = 31/248 (12%)

Query: 254 ELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKI----SSTIVRGLEYYTGCVYEA 309
              E     ++ E+    L    E  +    +   I       +   R          EA
Sbjct: 150 HWQEAHTLHLSKEEAMEYLKFFHETYKSLVKDLLNIAFLEGEKTVNERFPGSEKTLTLEA 209

Query: 310 ILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS- 368
           I+      +                    SR    + P    +   +RLI AL       
Sbjct: 210 IMPDGQALQIATSHYLSKNFTETFDVKYTSRENVVSYPHQLSAGCSTRLIGALIMSHGDD 269

Query: 369 -----TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                  ++ ++    +      ++    ++ ++  L   G + E    SS++FG ++K 
Sbjct: 270 SGLVLPLSMFDVHIKFLIINGAVTEGSELHKKFSDEL--KGYKVEWDF-SSRSFGYKIKN 326

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483
            +    P+++I G  E       +K                       ++++IP+ +L+S
Sbjct: 327 EEMIGTPVSVILGPSEIKSNWALVK------------------TRLSESKVSIPMDQLIS 368

Query: 484 TVKKILQE 491
            +K+ + +
Sbjct: 369 KIKETIDQ 376


>gi|313897385|ref|ZP_07830928.1| glycine--tRNA ligase [Clostridium sp. HGF2]
 gi|312957755|gb|EFR39380.1| glycine--tRNA ligase [Clostridium sp. HGF2]
          Length = 460

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/273 (10%), Positives = 64/273 (23%), Gaps = 33/273 (12%)

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
             +L+ F   G  +   +   D    F     + S+                +       
Sbjct: 220 QMELEFFCQPGTDMEWYQYYKDYCMSFLTNLGINSD---------------HLRFRDHTA 264

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
           +      KG  ++          G        +   ++  +  +    E     P  NEK
Sbjct: 265 EELAFYSKGTCDIEYNFHSQIGWGELWGIADRTDYDLKQHQEASKKSLE--YLDPATNEK 322

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
                     G  R                 F                  +    + P+ 
Sbjct: 323 YLAYCVEPAVGVERL-------------MLAFMCDAYDEEELENDTRIVMHLHPFLAPIK 369

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
              M        K     Q++   G         + + G + +  D    P  I      
Sbjct: 370 ACVMPLSKKLSDKAMEVFQLIAPVG---NCDYDEAGSIGKRYRRQDAVGTPFCITVDFET 426

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            +   + ++     ++    +K+  ++ E R+ 
Sbjct: 427 ENDNCVTVRHRDSMEQERVSLKDLSAYIEERIK 459


>gi|71032103|ref|XP_765693.1| prolyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68352650|gb|EAN33410.1| prolyl-tRNA synthetase, putative [Theileria parva]
          Length = 683

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/378 (10%), Positives = 96/378 (25%), Gaps = 36/378 (9%)

Query: 132 DVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLN 191
             D  G       +     + +      IK+           +    LE    H +    
Sbjct: 225 YYDISGCYIFLPASYFIWEIFNEWFNKQIKQRGVDNCYFPMFVTKERLEAEKTHLEGFSP 284

Query: 192 ERLIVLRAIDKLDKFGLQ--GVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLE 249
           E   V R  D      +        +            +   L   Q + +V +      
Sbjct: 285 EVAWVTRNGDVDFPDPIAIRPTSETIMYPEFSKWIRSYRDLPLKLNQWNSVVRWEFKQPT 344

Query: 250 KSMHELYELVKGTIAGEKGFNE-LVVISELVRKSGYNSNRIKISS-------TIVRGLEY 301
             +     L +          E L  + E++                        +    
Sbjct: 345 PFIRSREFLWQEGHTAHSTEKEALDTVYEMLDLYSKFYEEYLSVPVIKGVKSENEKFAGS 404

Query: 302 YTGCVYEAILGFPVMN----EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISR 357
                 EA +                   S     +Y+      +  +  + GF+     
Sbjct: 405 KMTTSLEAFVPANGRGVQAATSHLLGTTFSDMFDIKYEDEEGEKRKVHQTSWGFTTRSIG 464

Query: 358 LIVALKSLESSTNNIKEMGPVLITTMD----HDSDSLSKYQMYTQMLRTAGIRAEMFLGS 413
           +++ +   +        +    +  +          +S+     ++L  +G R ++    
Sbjct: 465 IMIMVHGDDRGLVVPPRVAKTQVVIVPILTKTADQVISRVNELYKLLTESGFRVKLDDRR 524

Query: 414 SKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               G +  + + R  PL +  G  +     +++                   R    A+
Sbjct: 525 GYTPGFKFNHWELRGVPLRLEVGAKDVENNTVRL------------------VRRDNFAK 566

Query: 474 ITIPISELVSTVKKILQE 491
             +P+  L +T++++L +
Sbjct: 567 ADVPLENLTTTIQQLLDQ 584


>gi|330888315|gb|EGH20976.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 402

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEDQMQAESAAFI 400


>gi|329769632|ref|ZP_08261036.1| glycyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838387|gb|EGF87996.1| glycyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 457

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/273 (10%), Positives = 67/273 (24%), Gaps = 34/273 (12%)

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELV 259
             +L+ F   G +L   +   DN  ++     +T E I +              E     
Sbjct: 218 QMELEFFCEPGTELEWHKIWKDNCENWLLNLGMTKENIRL---------RDHEKEELSHY 268

Query: 260 KGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEK 319
                  +              S  + +  +      + L Y      E  + + +    
Sbjct: 269 SNATTDIEFRFPFGWGELWGIASRTDYDLKQHMQHSGQDLTYQNLQTNEKFIPYCIEPSV 328

Query: 320 QKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVL 379
               V  +      Y+                 +G       LK           + P  
Sbjct: 329 GVDRVLLAFLCDA-YNEE--------------EVGEGDTRTVLK-------FHPAIAPYK 366

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
              +        +     Q L        +    + + G + +  D    P  I      
Sbjct: 367 AAILPLSKKLSEQATKVYQEL-AQDF--MVDFDETGSIGKRYRRQDEVGTPFCITYDFES 423

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            + GM+ ++D    +++   I   + +   +  
Sbjct: 424 ENDGMVTVRDRDSMEQVRMPISELKQYLTEKTK 456


>gi|213583926|ref|ZP_03365752.1| histidyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-0664]
          Length = 35

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 4/37 (10%)

Query: 1  MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIY 37
          M K      +  RG  D    E  I  RI  +++N+ 
Sbjct: 1  MAKN----IQAIRGMNDYLPGETAIWQRIEGTLKNVL 33


>gi|317502695|ref|ZP_07960807.1| proline--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315666181|gb|EFV05736.1| proline--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 493

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 70/257 (27%), Gaps = 35/257 (13%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L V ++   K         + S   R          EA+
Sbjct: 173 WQEGHTAHATKEEAEQEAQTMLKVYADFAEKWMAVPVLQGVKSETERFAGALDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G           +++    +          +RL+ AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKSFDVQFLNKENKPDYVWATSWGVSTRLMGALIMVHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    +       K Q     ++  GI  +     +K  G   
Sbjct: 293 GLVLPPKLAPIQVVIVPIYKGDEQRKAISDKLQPVITKMQELGISVKFDDSDNKRPG--F 350

Query: 422 KYAD--RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479
           K+AD   +  P+ ++ G  +     ++I                   R   + +  +   
Sbjct: 351 KFADYELKGVPVRLVMGGRDLENNTIEI------------------MRRDTLEKENVSFD 392

Query: 480 ELVSTVKKILQENKEEI 496
            +V  V+ +L + +  +
Sbjct: 393 GIVERVQTLLDDIQRNL 409


>gi|299745880|ref|XP_001841372.2| tars protein [Coprinopsis cinerea okayama7#130]
 gi|298406796|gb|EAU80442.2| tars protein [Coprinopsis cinerea okayama7#130]
          Length = 720

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 18  CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
                 RI N +++ +R  Y   G+  + +P + Y+  L +         + +F+L D +
Sbjct: 339 WLPHGTRIYNTLVELMREEYFKRGYQEVISPNM-YNSKLWETSGHWQNYKEDMFTL-DVE 396

Query: 78  GQWISLRYDLTAP 90
            +  +L+      
Sbjct: 397 KEKWALKPMNCPG 409



 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 27/320 (8%), Positives = 80/320 (25%), Gaps = 4/320 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
           N+ +S     +       + +  + +++  + +   N      I +       +      
Sbjct: 370 NMYNSKLWETSGHWQNYKEDMFTLDVEKEKWALKPMNCPGHCLIFDSRDRSYKELPIRMA 429

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+   +     D++  F   + L  E   +      I        
Sbjct: 430 EFGIIHRNEASGALTGLTR-VRRFVQDDTHVFCMPSQLEDEISALFDFMRHIYGLFGFEF 488

Query: 255 LYELVKGTIAGEKGFNELVVISELVRK--SGYNSNRIKISSTIVRGLEYYTGCVYEAILG 312
             EL                  + +++    +   + +++                  L 
Sbjct: 489 HLELSTRPENFLGEIETWNQAEDQLKQALEKHYPGQWELNPGDGAFYGPKIDITIRDALK 548

Query: 313 FPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI 372
                   +           +Y         + V      +G     VA+ +   +    
Sbjct: 549 RSFQCATIQLDFQLPERFNLKYRSADESELTRPVIIHRAILGSLERFVAIVTEHFAGKWP 608

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + P  I  +   +            L + G+ A++  G +     +++  +       
Sbjct: 609 FWLSPRQILVIPVAAPYKEYAAEIANRLTSLGLYADVDNGEN-TLPKKIRNGEIAQYNFI 667

Query: 433 IIQGTGERSRGMLQIKDLAK 452
           ++ G  E     + +++   
Sbjct: 668 LVVGQEELDARSVNVRNRDD 687


>gi|288818893|ref|YP_003433241.1| histidyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288788293|dbj|BAI70040.1| histidyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308752480|gb|ADO45963.1| histidyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 289

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 70/234 (29%), Gaps = 20/234 (8%)

Query: 16  ADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLE------YSDSLGKFLPDEDRPNKG 69
                ++             + ++Y F  +  P +E      Y+D    F+         
Sbjct: 11  RFFSFEDSEKLKNSFLVACEVLKDYRF--VILPTVEKYQPELYTDQYKPFVIGTC----- 63

Query: 70  VFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFI 129
                  DG  ++LR D T  LAR+++     +  P + +  G VF              
Sbjct: 64  ------QDGSLLNLRTDWTVSLARFLSS-IRHLELPVKVFYWGNVFSPMGDTEKFQMGIE 116

Query: 130 QCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDK 189
                +V S A+  +     +   ++    +      I     +      + +    +  
Sbjct: 117 HLGFSHVKSDAQVIEKLCEYLKKCSVNDFVVNLGHMGIVNRILEKYREREKIVKALFEKN 176

Query: 190 LNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243
            +E       +D L   G   V     +   + S +  +   ++    D  ++F
Sbjct: 177 FSELGKYPELVDLLYTQGGGEVIEEFVKRHPEFSKECEELLKVSEHLKDFSLTF 230


>gi|312113796|ref|YP_004011392.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218925|gb|ADP70293.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 640

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 40/122 (32%), Gaps = 3/122 (2%)

Query: 341 FKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400
                +    F      + + +++              ++ T+  D+D  +        L
Sbjct: 506 HTPVMIHRALFGSLERFIGILIENYAGHLPLWLSPVQTMVATIVSDAD--AYAGEVEAAL 563

Query: 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
             AG+RAE  L  ++    +++       P+  + G  E     + ++ L    + +  +
Sbjct: 564 VAAGVRAETDL-RNEKINYKVREHSLAKVPVMFVVGKREAEERTVSVRRLGSQAQETLSL 622

Query: 461 KN 462
             
Sbjct: 623 DE 624


>gi|224282568|ref|ZP_03645890.1| glycyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 422

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 30/101 (29%), Gaps = 2/101 (1%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  S        LR       +    +   G + +  D    PL I      
Sbjct: 286 VLPLSKKPELQSIAHDLAADLRQHEW--MIDYDEAGAIGRRYRREDEIGTPLCITVDFDT 343

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
                + I++    ++    +     +  ARV++  +   E
Sbjct: 344 IDDQAVTIRERDTMQQERVALDKVADYVAARVSEKRVRYPE 384


>gi|237831297|ref|XP_002364946.1| glycyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211962610|gb|EEA97805.1| glycyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 771

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 9/74 (12%)

Query: 395 MYTQMLRTA----GIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGTGERSRGMLQIK 448
              Q  R A    GI A++   ++ + G   +YA  D    P AI           + ++
Sbjct: 671 ELLQRARDACVARGISAKVDASTA-SIGK--RYARNDEVGTPFAITVDFESLKDDTVTVR 727

Query: 449 DLAKGKELSREIKN 462
           +    +++   + +
Sbjct: 728 ERDSMEQIRVSLSD 741


>gi|282877938|ref|ZP_06286747.1| proline--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299939|gb|EFA92299.1| proline--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 493

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 66/231 (28%), Gaps = 31/231 (13%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V ++   +         + S   R          EA++      +       G     
Sbjct: 194 LKVYADFAEQWMAVPVVQGVKSETERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 +++               +RLI AL                    V+I  +  +
Sbjct: 254 SFDVTYLNKENKPEYVWATSWGVSTRLIGALIMTHSDDNGLVLPPKLAPIQVVIIPIAKN 313

Query: 387 SDSLSKYQMYTQ----MLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + L             L+  GI  +    ++K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 EEQLKAIADKLNPFMDDLKKLGITVKYDDSNNKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
               +++                   R   + + TIP+  L   + K+L +
Sbjct: 372 ENNTIEV------------------MRRDTLEKETIPVEGLADYIYKLLDD 404


>gi|221506889|gb|EEE32506.1| glycyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 771

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 9/74 (12%)

Query: 395 MYTQMLRTA----GIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGTGERSRGMLQIK 448
              Q  R A    GI A++   ++ + G   +YA  D    P AI           + ++
Sbjct: 671 ELLQRARDACVARGISAKVDASTA-SIGK--RYARNDEVGTPFAITVDFESLKDDTVTVR 727

Query: 449 DLAKGKELSREIKN 462
           +    +++   + +
Sbjct: 728 ERDSMEQIRVSLSD 741


>gi|332290253|ref|YP_004421105.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330433149|gb|AEC18208.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 643

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 44/355 (12%), Positives = 96/355 (27%), Gaps = 8/355 (2%)

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
             +   + +     +                D +     +  +Y I   N      I  +
Sbjct: 284 KLKQYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTSSENREYAIKPMNCPGHVQIFNQ 343

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
                 D                   L G+ + +     D++  F     + SE    + 
Sbjct: 344 GLKSYRDLPLRMAEFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTENQIESEVTSCIK 402

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY 301
               I       ++Y  +        G +E+   +E         N ++       G  Y
Sbjct: 403 MVYDIYSTFGFTDIYVKLSTRPEHRIGSDEMWDRAEADLAKALEHNGLEYEVQPGEGAFY 462

Query: 302 YTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLI 359
                + A+        +   V       G      V+    +  P       +G     
Sbjct: 463 GPKLEF-ALRDSIGREWQCGTVQLDFALPGRLNASYVAEDNERKTPVMIHRAILGSIERF 521

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGN 419
           + + + E +      + P     M+         Q   + L  AG+R +  L  ++  G 
Sbjct: 522 IGIITEEYAGFFPAWLAPTQAVVMNITDSQADYVQNVVKTLSDAGLRVKSDL-RNEKIGF 580

Query: 420 QLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
           +++    +  P  ++ G  E + G + ++     K         E + E    Q+
Sbjct: 581 KIREHTLKRVPYMLVCGDKEIAEGKVAVR---TRKGADLGTFTVEEFTEILKNQV 632



 Score = 40.2 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 11/167 (6%), Positives = 40/167 (23%), Gaps = 3/167 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   +R   + Y +  ++ P       L +        
Sbjct: 256 MQEEAP-GMVFWHNDGWTIFRELETFVRAKLKQYDYQEVKGP-FMMDRVLWEKTGHWQNY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 314 GDLMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRK 173
                      +     + ++   +   ++ V    + +       K
Sbjct: 373 LMRVRGFTQDDAHIFCTENQIESEVTSCIKMVYDIYSTFGFTDIYVK 419


>gi|221487207|gb|EEE25453.1| glycyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 771

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 9/74 (12%)

Query: 395 MYTQMLRTA----GIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGTGERSRGMLQIK 448
              Q  R A    GI A++   ++ + G   +YA  D    P AI           + ++
Sbjct: 671 ELLQRARDACIARGISAKVDASTA-SIGK--RYARNDEVGTPFAITVDFESLKDDTVTVR 727

Query: 449 DLAKGKELSREIKN 462
           +    +++   + +
Sbjct: 728 ERDSMEQIRVSLSD 741


>gi|77458158|ref|YP_347663.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123758422|sp|Q3KEY2|SYT_PSEPF RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|77382161|gb|ABA73674.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 640

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +  + G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPNGWTLYQVLEQYMRKVQRDNGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           + +  +  +++        +   +   +                 +              
Sbjct: 320 ESES-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRAF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEEQMQAESAAFI 400


>gi|332827078|gb|EGJ99863.1| prolyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 493

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 69/257 (26%), Gaps = 28/257 (10%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L V ++   +         + S   R          EA+
Sbjct: 173 WQEGHTAHATREEAEAETIQMLNVYAQFAEEYMAMPVIKGVKSASERFAGAVDTYTIEAM 232

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G             +               +RLI AL        
Sbjct: 233 MQDGKALQSGTSHFLGQNFAKAFDVRFADKEGKMEHVWATSWGVSTRLIGALIMAHSDDN 292

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L+          + L+  GI  +     +K  G + 
Sbjct: 293 GLVLPPKLAPFQVVIVPIYKGDEQLALINEKVDGLVKSLKALGISVKYDNADNKKPGWKF 352

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIPIS 479
              + +  P+ +  G  +     +++  +D    + +S +  +             I I 
Sbjct: 353 SEYELKGVPVRLAMGARDMENNTVEVARRDTLTKETVSCDGLD-------------IYIK 399

Query: 480 ELVSTVKKILQENKEEI 496
            L+  ++  + +   ++
Sbjct: 400 NLLDEIQANIYKKAFDL 416


>gi|255009422|ref|ZP_05281548.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313147182|ref|ZP_07809375.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313135949|gb|EFR53309.1| prolyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 497

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 68/234 (29%), Gaps = 24/234 (10%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V ++   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYADFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + L    +K +     L+  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 DEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
               +++      ++ +      E++ +            L+  ++  + +   
Sbjct: 372 ENNTMEVMRRDTLEKETVTCDGIETYVQ-----------NLLEEIQANIYKKAR 414


>gi|322411037|gb|EFY01945.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 618

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 40/144 (27%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +     ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGDDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDKSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQ-AKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHPNYDDLDVTYEDYRQ 179



 Score = 37.1 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 2/108 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L   G        + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDQAAQDLTATLEADLMAKGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P+ +  G    + G+++IK  A G  +     N     E    + 
Sbjct: 572 IGLPIRVTVGKK-AADGIVEIKIKATGDSVEVTADNLIETLEILTKEQ 618


>gi|322386937|ref|ZP_08060561.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269219|gb|EFX52155.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 616

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GVYSYLPLANRVIEKAKKIMRQEFDKIGAVEMLAPALLSAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ +     L    + T   + R   +++  +      Y+I P +R+EK       +  +
Sbjct: 97  KNREKSDFILGPTHEETFTAIVRDSVKSYKQLP--LNLYQIQPKYRDEKRPRNGLLRTRE 154

Query: 131 CDVDNVGSSAETAD 144
             + +  S     D
Sbjct: 155 FIMKDAYSFHANYD 168



 Score = 37.9 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LI     D ++L+        L +AG    +   + +  G +   +D 
Sbjct: 513 NFPKELAPFDVHLIPVNVKDEEALALTDQIEANLLSAGYEVLVDDRNERA-GVKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
              P+ +  G    + G++++K  A G  +     N   
Sbjct: 572 IGLPIRVTVGKK-AAEGIVEVKIKATGDTIEVHADNLLE 609


>gi|238503462|ref|XP_002382964.1| glycyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|317138713|ref|XP_001817091.2| glycyl-tRNA synthetase 1 [Aspergillus oryzae RIB40]
 gi|220690435|gb|EED46784.1| glycyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 708

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 10/119 (8%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VLI  + + +            +R  GI   +   SS + G   +YA  D    P  
Sbjct: 591 PTKVLIVPLSNHASFRPLSHRLMMKMRRMGISNRVD-DSSASIGK--RYARNDELGTPFG 647

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQE 491
           I             ++D    K++           ++ V        E    ++K L E
Sbjct: 648 ITVDFQSVKDNTFTLRDRDSTKQVRASEDEILQALKSLVEG-----DETWEDIRKRLPE 701


>gi|89073900|ref|ZP_01160406.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050228|gb|EAR55732.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 631

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 1/89 (1%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGER 440
             M+         Q   + L+  GIR    L  ++  G +++    +  P  ++ G  E 
Sbjct: 544 VVMNITDAQSEYVQEIVEKLKKCGIRVNADL-RNEKIGFKIREHTLKRVPFMLVCGDKEV 602

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREA 469
             G++ ++          +I    ++ + 
Sbjct: 603 EAGVVAVRTRKGKDLGKFKIDELVAFMQE 631



 Score = 39.8 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 41/152 (26%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y +  ++ PL+     L +     D+ 
Sbjct: 257 MQQEAP-GMVFWHHNGWTIFRELEVFIREKLNEYDYQEVKGPLMMDR-VLWERSGHWDKY 314

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 315 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 373

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     +A++   +   +E V
Sbjct: 374 IMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMV 405


>gi|328882342|emb|CCA55581.1| Glycyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 459

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  +     K +     LR      E     +   G + +  D    P  +    
Sbjct: 366 VAVLPLSRNPQLSPKAKGLAADLR-QNWNIEFD--DAGAIGRRYRRQDEIGTPYCVTVDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    K+    +   +S+  +R
Sbjct: 423 DTLDDNAVTVRERDTMKQERVSLDQIQSYLGSR 455


>gi|325276812|ref|ZP_08142513.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324098050|gb|EGB96195.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 640

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 60/231 (25%), Gaps = 6/231 (2%)

Query: 221 DNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVR 280
           D++  F     +  E  D +   L +  +    ++   +    A   G  EL   +E   
Sbjct: 381 DDAHIFCTEEQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTRPAKRVGSEELWDRAEGAL 440

Query: 281 KSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ---KPVVFGSVGGGGRYDGL 337
               N + ++       G  Y     +          +                      
Sbjct: 441 ADALNESGLEWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAED 500

Query: 338 VSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYT 397
            SR +   +           + + ++                   M+             
Sbjct: 501 NSRVRPVMLHRAILGSFERFIGMLIEHYAGVFPAWLAPTQA--VIMNITDKQADFALQVE 558

Query: 398 QMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
           + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 559 KSLNGSGFRAKSDL-RNEKIGFKIREHTLLKVPYLLVIGDREVETQTVAVR 608



 Score = 38.3 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/142 (7%), Positives = 35/142 (24%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  I+TP +     L +         + +F+ 
Sbjct: 261 GMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDR-ILWERSGHWSNYAENMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
             +  +  +++        +   +   +                 +              
Sbjct: 320 SSES-RDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + ++    AD +
Sbjct: 379 VQDDAHIFCTEEQVKKEAADFI 400


>gi|296805896|ref|XP_002843772.1| glycyl-tRNA synthetase 1 [Arthroderma otae CBS 113480]
 gi|238845074|gb|EEQ34736.1| glycyl-tRNA synthetase 1 [Arthroderma otae CBS 113480]
          Length = 685

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 34/103 (33%), Gaps = 5/103 (4%)

Query: 375 MGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLA 432
              VL+  +          +  +  LR+ GI   +   S+ + G   +YA  D    P  
Sbjct: 573 PTKVLLVPLSSHQSFRPIIKNLSSQLRSLGISNRID-DSNASIGK--RYARNDELGTPFG 629

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
           I           + +++    K++    +   S  +  V  + 
Sbjct: 630 ITVDFDTVKDSTITLRERDTTKQVRGTTEEIISTVKRLVDGVE 672


>gi|15896443|ref|NP_349792.1| glycyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|59798597|sp|Q97EB8|SYG_CLOAB RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
           ligase; Short=GlyRS
 gi|15026266|gb|AAK81132.1|AE007815_2 Glycyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510601|gb|ADZ22237.1| glycyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 462

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/97 (10%), Positives = 27/97 (27%), Gaps = 3/97 (3%)

Query: 364 SLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKY 423
                 +   ++ P+    +        K       + ++    E     + + G + + 
Sbjct: 357 DQRIVLHFHPQIAPIKAAVLPLSKKLSEKALDVYSKI-SSKFNIE--YDETGSIGKRYRR 413

Query: 424 ADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREI 460
            D    P  I           + I+D     ++  +I
Sbjct: 414 QDEIGTPYCITVDFDTLEDEAVTIRDRDSMSQVRVKI 450


>gi|322373816|ref|ZP_08048351.1| proline--tRNA ligase [Streptococcus sp. C150]
 gi|321277188|gb|EFX54258.1| proline--tRNA ligase [Streptococcus sp. C150]
          Length = 620

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 5/139 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYMPLANRAIEKFKAIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDKSDFILGPTHEETFTALVRDAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCM 149
              D         D ++  
Sbjct: 156 IMKDGYSFHQNYEDLDVTY 174



 Score = 39.8 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 36/108 (33%), Gaps = 2/108 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +   ++      LIT    D ++ +  +     L   G        + +  G++   +D 
Sbjct: 513 NFPKDLAPYDVHLITVNTKDEEATALTERLEAALMAEGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P+ +  G    S G++++K  A G  +     N          + 
Sbjct: 572 IGLPIRVTVGKK-ASEGVVEVKIKATGDTIEVNADNLIETLAILTTEQ 618


>gi|237720697|ref|ZP_04551178.1| prolyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|293373969|ref|ZP_06620310.1| proline--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|229449532|gb|EEO55323.1| prolyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|292631045|gb|EFF49682.1| proline--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 497

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 13/213 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  E   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYGEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + L    +K +     L+  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 DEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +++      ++ +   +  E++ +  + +
Sbjct: 372 ENNTMEVMRRDTLEKETVTCEGIETYVQNLLEE 404


>gi|229496852|ref|ZP_04390561.1| lysyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316263|gb|EEN82187.1| lysyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 581

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLE 51
           G  D        RN+I  S+RN +  +G+  +ETP+L+
Sbjct: 183 GVRDIF----LKRNKIFTSMRNFFNEHGYLEVETPILQ 216


>gi|254453851|ref|ZP_05067288.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198268257|gb|EDY92527.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 649

 Score = 42.9 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/373 (9%), Positives = 92/373 (24%), Gaps = 29/373 (7%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N   I    + Y                +   +   +  G   +  +    + + +    
Sbjct: 274 NGWLIYTQLQDYMRRKQRAGGYVEVNTPQVVDRKLWEQSGHWEKYQEHMFVVEVDEDHAR 333

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
                    +      ++     K       ++ E     R        G+  V+     
Sbjct: 334 EKSVNALKPMNCPCHVLIYNQGLKSYRDLPMRMAEFGSCNRYEPSGALHGIMRVRG---- 389

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D++  F     +  E +  +     +  +                  G +E+   +E
Sbjct: 390 FTQDDAHIFCTEDQIEEETLTYIEFLTGVYKDLGFENFKVKFSDRPDTRAGSDEVWDKAE 449

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGL 337
               +      I+       G  Y     +  +      + +        V         
Sbjct: 450 TALLAATRKAGIEPELNPGEGAFYGPKLEF-VLTDAIGRDWQCGTHQVDFVLPDRLDANY 508

Query: 338 VSRFKGQNVPAT----GFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKY 393
           +     ++ P              + + ++              V++ ++  D+D     
Sbjct: 509 IGADGEKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASIISDAD--DYV 566

Query: 394 QMYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGML 445
           +     L+  G+RAE  + + K        + G           P+ +  G  E     +
Sbjct: 567 REVVAALQAKGVRAEADIRNEKINYKVREHSLGK---------VPVILACGAREVEERTV 617

Query: 446 QIKDLAKGKELSR 458
            ++ L   K+ S 
Sbjct: 618 SVRRLGD-KQTSV 629


>gi|320010915|gb|ADW05765.1| glycyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 460

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/258 (8%), Positives = 59/258 (22%), Gaps = 25/258 (9%)

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
               E   +   ++  G  L  E         ++   +   E         A  +     
Sbjct: 224 EQWQEYWMEQRWNWYTGLGLREE---------NMRWFEHPQEKLSHYSKRTADIEYRFRF 274

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
                   + G        +   ++     +G                  +   +  G  
Sbjct: 275 GG-----SEWGELEGVANRTDYDLKAHSEASGTDLFYYDQEKGERYTPYVIEPAAGVGRS 329

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
               L+  +     P     +    ++          +       V +  +  +     K
Sbjct: 330 MLAFLLDAYSEDEAPNAKGVMEKRAVMRL--------DPRLAPVKVAVLPLSRNPQLSPK 381

Query: 393 YQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAK 452
            +     LR      E     +   G + +  D    P  +           + +++   
Sbjct: 382 AKGLAADLR-QNWNIEFD--DAGAIGRRYRRQDEIGTPFCVTVDFDTLDDNAVTVRERDT 438

Query: 453 GKELSREIKNNESWREAR 470
            K+    +   +S+  +R
Sbjct: 439 MKQERVSLDQIQSYLGSR 456


>gi|253565674|ref|ZP_04843129.1| prolyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251945953|gb|EES86360.1| prolyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 497

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 68/234 (29%), Gaps = 24/234 (10%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V +E   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYAEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + L    +K +     L+  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 DEQLKLIDAKVEGIVAKLKQLGISVKYDNADNKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKE 494
               +++      ++ +      E++ +            L+  ++  + +   
Sbjct: 372 ENNTMEVMRRDTLEKETVTCDGIETYVQ-----------NLLEEIQANIYKKAR 414


>gi|221632630|ref|YP_002521851.1| prolyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156093|gb|ACM05220.1| prolyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 484

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 11/140 (7%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFG 418
                          V+I  +    +   + +        MLR A +R    L   K  G
Sbjct: 280 DDRGLKLPPRVAPIQVVIVPIWRKDEERRQVEETVDRVRAMLRRA-VRVHADLRDDKTPG 338

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITI 476
            +    D +  P+ +  G  + +   + +  +D   G+  +  I N     ++ +  I +
Sbjct: 339 WKFNDWDLKGVPIRLEIGPRDVASDQVTLVRRD-VLGQRQAVPIANLVGAVQSELESIQV 397

Query: 477 PISELVSTVKKILQENKEEI 496
               L    + +L+   E++
Sbjct: 398 S---LFRAARAMLERYTEDV 414


>gi|149200873|ref|ZP_01877848.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149145206|gb|EDM33232.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 648

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 44/386 (11%), Positives = 98/386 (25%), Gaps = 30/386 (7%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N  T+    + Y      R         +   +   +  G   +  +    + + +    
Sbjct: 273 NGWTVYTTLQDYMRRQQRRGGYVEVNTPQVVDRKLWERSGHWEKYQENMFIVEVDEDHAR 332

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLI--VLRAIDKLDKFGLQGVKLLL 215
              K  +    +N    +    + +  + D  L         R        G+  V+   
Sbjct: 333 --EKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRG-- 388

Query: 216 GEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVI 275
                D++  F     + SE    +     I  +        L         G +E+   
Sbjct: 389 --FTQDDAHIFCTEDQIESETARFITFLSGIYTDLGFPNFEVLFSTRPDVRAGSDEVWDK 446

Query: 276 SELVRKSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGG 332
           +E    S   +  I+       G  Y     +   +AI         Q   V        
Sbjct: 447 AEAALLSATRAAGIEPKVNPGEGAFYGPKLEFTLTDAIGRKWQCGTHQVDFVLPERLDAN 506

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSK 392
                 ++ +   +           + + ++              V++ ++  ++D    
Sbjct: 507 YIGTDGAKHRPVMLHRAVLGSFERFIGILIEEHAGRLPFWLAPRQVVVASIVSEAD--DY 564

Query: 393 YQMYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGM 444
                Q L    IRAE    + K        + G           P+ +  G  E   G 
Sbjct: 565 VTKVAQNLTDLNIRAEADTRNEKINYKVREHSLGK---------VPVILACGPREVEDGT 615

Query: 445 LQIKDLAKGKELSREIKNNESWREAR 470
           + ++ L +       +    +     
Sbjct: 616 VSLRRLGEKDSRIVPLDQVAAELARE 641


>gi|255027747|ref|ZP_05299733.1| prolyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 90

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 27 NRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRY 85
           +I   IR   E  G   +  P L+ ++ L +     +     +  L+D   +  +L  
Sbjct: 3  RKIETIIREELEAIGAAELLMPALQPAE-LWQESGRWNDYGPELMRLKDRASRDFALGP 60


>gi|237716484|ref|ZP_04546965.1| prolyl-tRNA synthetase [Bacteroides sp. D1]
 gi|255691705|ref|ZP_05415380.1| proline--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|262408082|ref|ZP_06084630.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294809476|ref|ZP_06768179.1| proline--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|298484158|ref|ZP_07002324.1| proline--tRNA ligase [Bacteroides sp. D22]
 gi|299145587|ref|ZP_07038655.1| proline--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|229444131|gb|EEO49922.1| prolyl-tRNA synthetase [Bacteroides sp. D1]
 gi|260622644|gb|EEX45515.1| proline--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|262354890|gb|EEZ03982.1| prolyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294443294|gb|EFG12058.1| proline--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295084169|emb|CBK65692.1| prolyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298269662|gb|EFI11257.1| proline--tRNA ligase [Bacteroides sp. D22]
 gi|298516078|gb|EFI39959.1| proline--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 497

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 13/213 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  E   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYGEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKLEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + L    +K +     L+  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 DEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQ 473
               +++      ++ +   +  E++ +  + +
Sbjct: 372 ENNTMEVMRRDTLEKETVTCEGIETYVQNLLEE 404


>gi|29829188|ref|NP_823822.1| prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|81838431|sp|Q82JV8|SYP2_STRAW RecName: Full=Prolyl-tRNA synthetase 2; AltName: Full=Proline--tRNA
           ligase 2; Short=ProRS 2
 gi|29606294|dbj|BAC70357.1| putative prolyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 471

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/243 (12%), Positives = 66/243 (27%), Gaps = 27/243 (11%)

Query: 208 LQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEK 267
              ++  L    T+        A+ T E+     + +   +     E    +   +  + 
Sbjct: 142 RWELRPRLFLRTTEFLWQEGHTAHATYEEARDFAAHIHRHVYADFMENVLAMDVVLGRKT 201

Query: 268 GFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGS 327
                      +   G   +   +       L       +     +     KQ+ V   S
Sbjct: 202 AKERFAGAVNTLTLEGMMGDGKALQMGTSHELGQNFARAFHT--QYLSKEGKQELVWQTS 259

Query: 328 VGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
            G   R  G +    G +                                V++  +  D 
Sbjct: 260 WGSTTRMIGALVMMHGDDN-------------------GLRVPPRLAQTQVVVLAIKGDE 300

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA---DRRNCPLAIIQGTGERSRGM 444
             L+K +     L+ AG+R ++   +   FG   + A   + +  P+ +  G  +   G 
Sbjct: 301 AVLAKVRETGDRLKAAGLRVQVDDRTDVPFG---RRAVDWELKGVPVRVEVGPRDLENGT 357

Query: 445 LQI 447
             +
Sbjct: 358 AMV 360


>gi|330752678|emb|CBL88143.1| prolyl-tRNA synthetase [uncultured Cytophagia bacterium]
          Length = 491

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 9/221 (4%)

Query: 263 IAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322
            A  +    L V S+ V K         + S   R          EA++      +    
Sbjct: 182 EAILETQQMLEVYSDFVEKYMALPVTKGVKSESERFAGAVDTYCIEALMQDGKALQAGTS 241

Query: 323 VVFGSVGGGGRYDGLVSRFKGQNVP-ATGFSIGISRLIVALKSL----ESSTNNIKEMGP 377
              G            ++   +++   T + +    +   + +                 
Sbjct: 242 HFLGQNFAKAFNVKFTNKEGKEDLVWGTSWGVSTRLMGALIMAHSDDDGLVLPPNLAPIQ 301

Query: 378 VLITTMDHDSDSLS----KYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
           V+I  +    + L     K +     L + GI  +     +   G +    + +  PL I
Sbjct: 302 VVIIPIYKGEEQLERIALKVEKIRNSLISKGISVKFDRRDTHKPGWKFAEYELKGVPLRI 361

Query: 434 IQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
             G  +   G L+I      ++ S  +   E   +  + +I
Sbjct: 362 AIGPKDLDNGTLEIARRDTKEKKSYPVDGIEDKIQFLLKEI 402


>gi|284030420|ref|YP_003380351.1| glycyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283809713|gb|ADB31552.1| glycyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 461

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 27/91 (29%), Gaps = 3/91 (3%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +  ++D   K +     LR +    +     +   G + +  D    P  I      
Sbjct: 370 VLPLSRNADLSPKAKDLAAELRQS-WNVDFD--DAGAIGRRYRRQDEIGTPYCITVDFDT 426

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                + I++    K+    +     +   R
Sbjct: 427 LEDHAVTIRERDSMKQERVALTEVTGYLAQR 457


>gi|227892604|ref|ZP_04010409.1| prolyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227865589|gb|EEJ73010.1| prolyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 565

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 5/103 (4%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R+  +    I    +      +  P L  + +L +      +    +F L
Sbjct: 38  GVYAYLPLGYRVLRKAEAIIEQEMDRINVPEMIMPHLLPA-TLWQESGRYKKYGPEMFKL 96

Query: 74  QDDDGQWISLRY--DLTAPLARYVAENFDTIVFPCRTYRIGPV 114
           +D  G+   L    + T      +A+N  +             
Sbjct: 97  KDRHGRESLLGPTHEET--FTEIIAKNLKSYKQMPLALYQIQT 137


>gi|297194489|ref|ZP_06911887.1| glycyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197718701|gb|EDY62609.1| glycyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 460

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/229 (7%), Positives = 51/229 (22%), Gaps = 13/229 (5%)

Query: 252 MHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISST-----IVRGLEYYTGCV 306
           M + +   +     E+         E +      +  I+                     
Sbjct: 231 MEQRWNWYRDLGLREENMRWFEHPQEKLSHYSKRTADIEYRFQFGGSEWGELEGVANRTD 290

Query: 307 YEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV----AL 362
           Y+                  +      Y    +   G+ + A                 +
Sbjct: 291 YDLKAHSKASGTDLLYFDQDAQERWTPYVIEPAAGVGRAMLAFLLDAYNEDEAPNAKGVM 350

Query: 363 KSLE-SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
           +       +       V +  +  ++    K +     LR      E     +   G + 
Sbjct: 351 EKRAVLRLDPRLAPVKVAVLPLSRNAQLSPKAKGLAADLRK-NWNIEFD--DAGAIGRRY 407

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
           +  D    P  +           + +++    K+    +   + +  +R
Sbjct: 408 RRQDEIGTPFCVTVDFDTLDDNAVTVRERDTMKQERVSLDQIQGYLGSR 456


>gi|195978861|ref|YP_002124105.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975566|gb|ACG63092.1| prolyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 613

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  ++  G   +  P L  +D L +     +   + ++ L
Sbjct: 33  GIYAYLPLAHRTIEKFKTIMRQEFDKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 91

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 92  KNRDKSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 150

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 151 IMKDGYSFHQSYDDLDVTYDAYRQ 174


>gi|323126466|gb|ADX23763.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 618

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 40/144 (27%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +     ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGDDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDKSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQ-AKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHPNYDDLDVTYEDYRQ 179



 Score = 37.5 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 2/108 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D  +          L   G        + +  G++   +D 
Sbjct: 513 NFPKELAPFDVHLITVNVKDQAAQDLTATLEADLMANGYDVLTDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P+ +  G    + G+++IK  A G  +     N     E    + 
Sbjct: 572 IGLPIRVTVGKK-AADGIVEIKIKATGDSIEVTADNLIETLEILTKEQ 618


>gi|319935432|ref|ZP_08009869.1| glycyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319809648|gb|EFW06061.1| glycyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 458

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 31/104 (29%), Gaps = 3/104 (2%)

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +    + P+    +        K      ML       E  +  +   G + +  D   
Sbjct: 357 MHLHPAVAPIKAAILPLTKKQSDKAMEVYSML-AQDFNVEFDV--AGQIGKRYRRQDAIG 413

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            P  I       +   + ++D    +++   I   +S+   ++ 
Sbjct: 414 TPFCITVDFDSETDQTVTLRDRDSMEQIRLPIDELKSYIAEKIK 457


>gi|226321240|ref|ZP_03796773.1| Threonyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233369|gb|EEH32117.1| Threonyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 231

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV +  +  ++             +  GIR ++   SS+    +++    +  P   
Sbjct: 130 WLSPVQVVIIPVNNIVEDYAIKVFNKFKNEGIRIKLDNSSSR-MNAKIREYQAKKIPYMF 188

Query: 434 IQGTGERSRGMLQIKDLAKGKEL 456
           I G  E +   + I+     +++
Sbjct: 189 IIGEREATEERISIRT-RTNEQI 210


>gi|110679173|ref|YP_682180.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123362019|sp|Q168U9|SYT_ROSDO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|109455289|gb|ABG31494.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 648

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 40/391 (10%), Positives = 105/391 (26%), Gaps = 29/391 (7%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N  +I    + Y                +   +   +  G   +  +    + + +    
Sbjct: 273 NGWSIYTTLQDYMRRKQRAAGYQEVNTPQVVDRKLWEASGHWDKYQEHMFIVEVDEDHAR 332

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
                    +       +     K       ++ E     R        G+  V+     
Sbjct: 333 EKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRG---- 388

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D+   F +   + +E    +    S+  +    +   +         G  E     E
Sbjct: 389 FTQDDGHTFCREDQIEAECAAFITYLSSVYQDLGFEKFEIMFATRPEKRVGSEESWDHVE 448

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRY 334
              ++   +     +     G  Y     +   +AI         Q              
Sbjct: 449 AALENAIKATGHPYTLDEGEGAFYGPKLDFKLTDAIGREWQCGTFQVDPNLPERLDATYI 508

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
               ++ +   +           + + +++             V++ ++  D+D      
Sbjct: 509 GQDGAKHRPYMLHRACLGSFERFIGILIENSAGKLPFWLAPRQVVVASIISDAD--DYVL 566

Query: 395 MYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
              + L+ AG+RAE  + + K        + G           P+ +  G  E     + 
Sbjct: 567 EVVEKLQAAGVRAEADVRNEKINYKVREHSVGK---------VPVILAVGAREVEEKTVT 617

Query: 447 IKDLAKGKELSREIKNNESWREARVAQITIP 477
           ++ L  G++ +  ++  ++  +A   + T P
Sbjct: 618 LRRL--GEKKT-SVETLDAVTQALGREATPP 645



 Score = 37.9 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 30/270 (11%), Positives = 68/270 (25%), Gaps = 19/270 (7%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   + D +R      G+  + TP +     L +     D+ 
Sbjct: 260 MQEEAP-GQVFWHPNGWSIYTTLQDYMRRKQRAAGYQEVNTPQVVDRK-LWEASGHWDKY 317

Query: 67  NKGVFSLQDDDGQ-----WISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHG 121
            + +F ++ D+         +L+        +   +   +                 +  
Sbjct: 318 QEHMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPS 377

Query: 122 PGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEK 181
                                 + ++    A  +  +     D               EK
Sbjct: 378 GALHGIMRVRGFTQDDGHTFCREDQIEAECAAFITYLSSVYQDLG------------FEK 425

Query: 182 IGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMV 241
             +    +  +R+    + D ++      +K        D       G  L  +  D + 
Sbjct: 426 FEIMFATRPEKRVGSEESWDHVEAALENAIKATGHPYTLDEGEGAFYGPKLDFKLTDAIG 485

Query: 242 SFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
                   +    L E +  T  G+ G   
Sbjct: 486 REWQCGTFQVDPNLPERLDATYIGQDGAKH 515


>gi|312131710|ref|YP_003999050.1| prolyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908256|gb|ADQ18697.1| prolyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 490

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 62/243 (25%), Gaps = 15/243 (6%)

Query: 255 LYELVKGTIAGEKGFNE----LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAI 310
             E        E+   E    L V ++   +           +   R          EA+
Sbjct: 170 WQEGHTAHATREEAVAETNQMLEVYAKFAEEWMAVPVVRGRKTANERFAGADDTLCIEAL 229

Query: 311 LGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSL 365
           +      +       G             +   Q           +RL+ AL       L
Sbjct: 230 MQDGKALQAGTSHFLGQNFAKAFDVKFQDKTGKQEFVWGTSWGVSTRLMGALIMAHSDDL 289

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQM----YTQMLRTAGIRAEMFLGSSKNFGNQL 421
                       V+I  +    + L+          + L+  GI  +     S   G + 
Sbjct: 290 GLVLPPKLAPIQVVIVPIYKGEEQLNAIFERMEPTIKSLKVQGISVKFDDDDSARPGWKF 349

Query: 422 KYADRRNCPLAIIQGTGERSRGMLQI--KDLAKGKELSREIKNNESWREARVAQITIPIS 479
              + +  P+ I  G  +     +++  +D    + +S +  +          Q  I   
Sbjct: 350 AEYELKGVPVRIAVGARDLENHQVEVARRDTLSKESVSMDGLDQYLINLLNDIQNNIYKK 409

Query: 480 ELV 482
            L 
Sbjct: 410 ALA 412


>gi|309809554|ref|ZP_07703412.1| proline--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170226|gb|EFO72261.1| proline--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 483

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 20/72 (27%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +       I    EN     +  P    + +L +      +    +F L
Sbjct: 38  GVYAYLPLAYLVLRNAEKIIEEEMENINVPEMIMPHFLPA-TLWEESGRLPKYGPEMFRL 96

Query: 74  QDDDGQWISLRY 85
           +D  G+   L  
Sbjct: 97  KDRHGRESLLGP 108


>gi|239994811|ref|ZP_04715335.1| prolyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 131

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 24/82 (29%), Gaps = 3/82 (3%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSK-NFGNQLKYADRRNCPLAIIQGTGE 439
             M          +   + L   G   E+     K   G      +    P +I+ G   
Sbjct: 43  MNMHKSHRIKEAAEALYEELVALG--VEVLFDDRKERPGVMFNDMELIGIPHSIVIGERN 100

Query: 440 RSRGMLQIKDLAKGKELSREIK 461
                ++ K+   G++   +I 
Sbjct: 101 LDNQQVEYKNRRTGEKQLLDIS 122


>gi|240047776|ref|YP_002961164.1| threonyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985348|emb|CAT05361.1| Threonyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 578

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 31/107 (28%), Gaps = 5/107 (4%)

Query: 351 FSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMF 410
                  + + L+  +           V +  +    D  +++      L       E+ 
Sbjct: 460 IGTYERFISILLEQTKGVLPFWLSPKQVSVIPILPKHDDYAEFVR--SELAKNNFEVEVD 517

Query: 411 LGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELS 457
               +    +++ A  +     +I G  E     +  +    GK+ S
Sbjct: 518 TRDER-ITKKIREAQIQKVKYQLIIGDSEVENQKITYR--EYGKQES 561



 Score = 40.2 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 63/229 (27%), Gaps = 15/229 (6%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           GF       ++I N+I D I    + YGF  + TP                     +F  
Sbjct: 202 GFPVWLENGMKIHNKIKDKILAFDKRYGFREVLTPHFGEKHLYETS-GHLAHYRDDMFEP 260

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCD- 132
              +  ++  R  +T P       +         +YR  P   +E+    RF +      
Sbjct: 261 IKAESDYLIPRP-MTCP------HHIVLFDKAQCSYRQLPYRISEQSRLYRFEKSGALTG 313

Query: 133 ------VDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHG 186
                 +D        +  ++          +    + + I I+         E      
Sbjct: 314 LERVRSMDLTEGHIFVSRKQIFDECKHLFTMIEEVLDFFEIKIDYISFSRRDPEDKSKFY 373

Query: 187 DDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSE 235
           DD+             LD   ++ V+ +          DF     L  E
Sbjct: 374 DDEQMWNDAENDLKKFLDSHNVKYVEKIGEAAFYGPKIDFQIKTALNKE 422


>gi|237808486|ref|YP_002892926.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259516783|sp|C4LFH3|SYT_TOLAT RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|237500747|gb|ACQ93340.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 642

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/152 (8%), Positives = 40/152 (26%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR     Y ++ ++ P       L +     D+ 
Sbjct: 256 MQEEAP-GMVFWHNDGWIIFRELETFIRQKLREYDYEEVKGP-FMMDRVLWERSGHWDKY 313

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F+    + +  +++        +   +   +                 +       
Sbjct: 314 ADAMFT-TSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHG 372

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +    A+ ++   ++  +  V
Sbjct: 373 LMRVRGFTQDDAHIFCAENQIQDEVSACIRMV 404



 Score = 42.5 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 44/403 (10%), Positives = 107/403 (26%), Gaps = 34/403 (8%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVD-----NVGSSAETADAEMCMMMA 152
           +          +         +      ++  + D +      +        +      A
Sbjct: 255 HMQEEAPGMVFWHNDGWIIFRELETFIRQKLREYDYEEVKGPFMMDRVLWERSGHWDKYA 314

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           D +     +  +Y I   N      I  +      D                   L G+ 
Sbjct: 315 DAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGL- 373

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +  E    +              +   +        G +E+
Sbjct: 374 MRVRGFTQDDAHIFCAENQIQDEVSACIRMVYDTYSTFGFKNIAVKLSTRPEKRIGSDEM 433

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGG-- 330
              +E    +    N I+       G  Y     +        ++   +           
Sbjct: 434 WDRAEEALSAALKHNNIEFDLQPGEGAFYGPKIEF---TLHDCLDRAWQCGTVQLDFALP 490

Query: 331 ---GGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDS 387
              G  Y G  +      +        + R I  L   E++      + P+    M+   
Sbjct: 491 GRLGATYVGEDNDRHVPVMIHRAILGSMERFIGILTE-ETAGYFPLWLAPLQAVVMNITD 549

Query: 388 DSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
           +     +     L  +GIRA+  L  ++  G +++    +  P  ++ G  E   G + +
Sbjct: 550 NQADYVKEVVNTLNESGIRAKADL-RNEKIGFKIREHTLKRVPYMLVCGDKEMEAGEIAV 608

Query: 448 KDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ 490
           +        +R   +   +           +++LV  ++K + 
Sbjct: 609 R--------TRRGVDLGKF----------KVTDLVEQLRKEIS 633


>gi|298713061|emb|CBJ48836.1| eIF-2alpha kinase GCN2 similar to Eukaryotic translation initiation
            factor 2-alpha kinase 4 (GCN2-li [Ectocarpus siliculosus]
          Length = 1697

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 20   TKEIRIRNRILDSIRNIYENYGFDPIETPL--LEYSDSLGKFLPDEDRPNKGVFSLQDDD 77
              E      + D +R ++E +G     TP+            L      ++G+  L D  
Sbjct: 940  PIEAPAVALVCDGLRRVFETHGA----TPVAPPTIRPKPPPSLAPPALASRGLVRLVDRK 995

Query: 78   GQWISLRYDLTAPLARYVA 96
            G  ++L  +LT P AR+VA
Sbjct: 996  GAVVTLPGNLTVPFARFVA 1014


>gi|251781674|ref|YP_002995976.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390303|dbj|BAH80762.1| prolyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 618

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 40/144 (27%), Gaps = 5/144 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +     ++ L
Sbjct: 38  GIYAYLPLANRTIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGDDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDKSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQ-AKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCMMMADT 154
              D         D ++       
Sbjct: 156 IMKDGYSFHPNYDDLDVTYEDYRQ 179


>gi|238060528|ref|ZP_04605237.1| glycyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237882339|gb|EEP71167.1| glycyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 459

 Score = 42.9 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 25/93 (26%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  +     K +     LR      E     +   G + +  D    P  +    
Sbjct: 366 VAVLPLSRNEALSPKAKQLAADLRKR-WVVEFDDSQA--IGRRYRRQDEIGTPFCVTVDF 422

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++     +    +   E +   R
Sbjct: 423 DTLDDDAVTVRNRDTMAQERIGLDQVERYLIER 455


>gi|225464551|ref|XP_002272741.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 547

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 63/211 (29%), Gaps = 5/211 (2%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +   +     E  K  +     + +       +       ++++  +  VR   
Sbjct: 217 LEFLWQEGHTAHATPEEAEKEALQMIDVYTKFAYEQAAIPVITGRKSKVETFAGAVRTYT 276

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
                     L     +   +     + G     +    +   Q   A         ++ 
Sbjct: 277 IEAMMGDRKALQAGTSHNLGQNFS-RAFGTQFTDENGQRQHIWQTSWAVSTRFIGGIIMT 335

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKN 416
                            V+I  +   +D     L+     T++L++A I+ ++     + 
Sbjct: 336 HGDDAGLMLPPKIAPIQVVIIPIWKKADEKTGVLNAASSVTEVLKSANIKVKVDDSDQRT 395

Query: 417 FGNQLKYADRRNCPLAIIQGTGERSRGMLQI 447
            G +  + + +  PL I  G  + S G + I
Sbjct: 396 PGWKFNFWEMKGVPLRIEIGPRDVSSGSVVI 426


>gi|194017643|ref|ZP_03056254.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010915|gb|EDW20486.1| prolyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 477

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 60/228 (26%), Gaps = 8/228 (3%)

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           + FL  +         E ++ T      +  L    EL+        + +          
Sbjct: 157 LEFLWQEGHTCHETEQEAIEETERMLHIYASL--CEELLAIPVIKGRKTEKEKFAGARFT 214

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVP-ATGFSIGISRLI 359
           Y    +                  F    G    +        Q         I  + ++
Sbjct: 215 YTVESLMHDGKALQTATSHFFGNGFAKAFGIEFLNREGKLEHVQQTSWGFTTRIIGAMIM 274

Query: 360 VALKSLESSTNNIKEMGPVLITTMDHDSD-SLSKYQMYTQML-RTAGIRAEMFLGSSKNF 417
           V                 V I  +    +  L       + L R A  RA++   S K  
Sbjct: 275 VHGDDRGLVLPPNIAPTQVRIVPIASHKEGVLDHAYELKERLTRIA--RADID-ASDKQP 331

Query: 418 GNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNES 465
           G +    + +  PL +  G  +  +G + +     G++ +  +   E 
Sbjct: 332 GWKFNECEMQGIPLRVEVGPKDIEKGQVMLARRDTGEKQAVTLDALEQ 379


>gi|115638543|ref|XP_783415.2| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative) isoform 1 [Strongylocentrotus
           purpuratus]
 gi|115931464|ref|XP_001186319.1| PREDICTED: similar to Prolyl-tRNA synthetase
           (mitochondrial)(putative) [Strongylocentrotus
           purpuratus]
          Length = 569

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G        +R   +++  I    +  G   I  P +  S SL K           + +L
Sbjct: 177 GTFHLLPLAMRALEKLIKVIDTEMQKVGGQKIAMPGMTPS-SLWKTSGRYSDYGPELITL 235

Query: 74  QDDDGQWISLRY 85
           QD       L  
Sbjct: 236 QDRHNVDYCLGP 247


>gi|326501058|dbj|BAJ98760.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 9/100 (9%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQ 435
             +  +  + +     ++  + L  AGI   +   +  + G   +YA  D    P A+  
Sbjct: 579 CTVFPLVKNQEFDDAAKVLAKELTAAGISHIID-TTGISIGR--RYARTDEIGVPFAVTV 635

Query: 436 GTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
                S   + I++    +++   I    S  +      +
Sbjct: 636 D----SATEVTIRERDSKQQVRVGIDEVASVVKELTEGQS 671


>gi|239979348|ref|ZP_04701872.1| glycyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291451223|ref|ZP_06590613.1| glycyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291354172|gb|EFE81074.1| glycyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 460

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 27/92 (29%), Gaps = 5/92 (5%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTG 438
           +  +  + +   K +     LR    I        +   G + +  D    P  +     
Sbjct: 369 VLPLSRNPELSPKAKGLAAALRQHWNI----EFDDAGAIGRRYRRQDEIGTPFCVTVDFD 424

Query: 439 ERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                 + +++    K+    +   E +  AR
Sbjct: 425 TLDDNAVTVRERDTMKQERVSLDQIEGYLAAR 456


>gi|134282011|ref|ZP_01768717.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134246540|gb|EBA46628.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 681

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 4/113 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   ++  +R   ++ G+  + +P +    SL +           +F+ 
Sbjct: 273 GAVFWHPRGWAVFQELIAYMRRRQQDAGYVEVNSPDVMDR-SLWEISGHWQNYRDHMFTT 331

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGR 124
           + +DG+ ++L+       A     +        P R    G V R E  G   
Sbjct: 332 ETEDGRALALKPMNCPGSALLY-RHGLKSYRDLPIRMGEFGKVHRYEPSGSLH 383



 Score = 41.4 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 9/72 (12%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS---SKNFGNQ-LKYADRRNCPLAIIQG 436
             +       +  Q   ++LR AG+RAE  + +         Q L+       P  ++ G
Sbjct: 555 IVLSITEAHGAYAQDVARLLRGAGLRAEADIRNETIGYKIREQTLQR-----IPFLLVVG 609

Query: 437 TGERSRGMLQIK 448
             ER  G + I+
Sbjct: 610 AKERDAGAVAIR 621


>gi|323333338|gb|EGA74735.1| YHR020W-like protein [Saccharomyces cerevisiae AWRI796]
          Length = 674

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 18/106 (16%)

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +     L+  GIRA      +   G +    + +  P+ I  G  +  +  + +   
Sbjct: 497 ETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYELKGIPIRIELGPKDIEKNQVVV--- 553

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           R     +  +   EL + + +IL+E + ++
Sbjct: 554 ---------------VRRNDSKKYVVSFDELEARIPEILEEMQGDL 584


>gi|262306361|gb|ACY45773.1| his-tRNA synthetase [Hutchinsoniella macracantha]
          Length = 149

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDN 222
            ++ I +N+R++LDG+    G+  D    +   +  A+DKLDK   + V+  + +     
Sbjct: 26  GNFLIKVNHRQLLDGMFGACGVPED----KFRPICSAVDKLDKSPWEEVRKEMIDE---- 77

Query: 223 SGDFTKGANLTSEQIDIMVSFLSIDLEKSMHEL---YELVKGTIAGEKGFNELVVISELV 279
                    L     D +  F+ ++ +  + E     E +K +   +K  +E+ ++ +  
Sbjct: 78  -------KGLDPXVADKIGEFVKLNGKLDLVEKLKSNECLKNSQVAQKALDEMALLLKYC 130

Query: 280 RKSG 283
               
Sbjct: 131 XIYN 134


>gi|239941025|ref|ZP_04692962.1| glycyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239987504|ref|ZP_04708168.1| glycyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291444465|ref|ZP_06583855.1| glycyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291347412|gb|EFE74316.1| glycyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 460

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 378 VLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGT 437
           V +  +  ++    K +     LR      E     +   G + +  D    P  +    
Sbjct: 367 VAVLPLSRNAQLSPKAKGLAADLRK-NWNIEFD--DAGAIGRRYRRQDEIGTPFCVTVDF 423

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREAR 470
                  + +++    K+    +   +++  AR
Sbjct: 424 DTLDDNAVTVRERDTMKQERVSLDQIQAYLGAR 456


>gi|114769524|ref|ZP_01447150.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114550441|gb|EAU53322.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 649

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 45/373 (12%), Positives = 98/373 (26%), Gaps = 27/373 (7%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEA 157
           N   I    + Y      +N        +   +   +  G   +  +    + + +    
Sbjct: 273 NGWKIYTALQDYMRRMQDKNGYVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEDHAR 332

Query: 158 VGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGE 217
                    +       +     K       ++ E     R        G+  V+     
Sbjct: 333 EKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRG---- 388

Query: 218 GRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISE 277
              D+   F     + SE    +    ++  +   +E             G +E+   +E
Sbjct: 389 FTQDDGHIFCSEEQIESETKIYIDFLSNVYKDLGFNEFKVKFSDRPEKRSGSDEVWDKAE 448

Query: 278 LVRKSGYNSNRIKISSTIVRGLEYYTGCVY---EAILGFPVMNEKQKPVVFGSVGGGGRY 334
               S   +  I+    I  G  Y     +   +AI         Q   V          
Sbjct: 449 KALLSATRAAGIEPELNIGEGAFYGPKLEFVLTDAIGRDWQCGTHQVDFVLPERLDASYI 508

Query: 335 DGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQ 394
                + +   +           + + ++S             V++ ++  D++      
Sbjct: 509 GKDGDKHRPVMLHRATLGSFERFIGILIESHAGKLPFWLAPRQVVVASIVSDAN--DYVL 566

Query: 395 MYTQMLRTAGIRAEMFLGSSK--------NFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
                L TAGIRAE  + + K        + G           P+ +  G  E     + 
Sbjct: 567 EKVAALNTAGIRAEADIRNEKINYKVREHSLGK---------VPVILAVGAREVEEDTVT 617

Query: 447 IKDLAKGKELSRE 459
           ++ L + K+    
Sbjct: 618 VRRLGQ-KQTEVN 629


>gi|323304725|gb|EGA58486.1| YHR020W-like protein [Saccharomyces cerevisiae FostersB]
          Length = 687

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 18/106 (16%)

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +     L+  GIRA      +   G +    + +  P+ I  G  +  +  + +   
Sbjct: 496 ETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYELKGIPIRIELGPKDIEKNQVVV--- 552

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           R     +  +   EL + + +IL+E + ++
Sbjct: 553 ---------------VRRNDSKKYVVSFDELEARIPEILEEMQGDL 583


>gi|308049557|ref|YP_003913123.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Ferrimonas
           balearica DSM 9799]
 gi|307631747|gb|ADN76049.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Ferrimonas
           balearica DSM 9799]
          Length = 644

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 36/106 (33%), Gaps = 9/106 (8%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          I   +   +R     YG++ + TPL+     + +     D+ ++ +F+ 
Sbjct: 262 GMVFWHNDGWTIYQELEGFMRKQLHKYGYEEVRTPLVMDK-VMWERSGHWDKYSEMIFA- 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEK 119
            + + +  +++             +        ++YR  P    E 
Sbjct: 320 TESEKRTYAVKPMNCPG-------HLQIFKQGLKSYRDLPYRMAEF 358



 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/362 (10%), Positives = 103/362 (28%), Gaps = 16/362 (4%)

Query: 98  NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV-----GSSAETADAEMCMMMA 152
           ++         +        ++      +Q  +   + V             +      +
Sbjct: 255 HWQEEAPGMVFWHNDGWTIYQELEGFMRKQLHKYGYEEVRTPLVMDKVMWERSGHWDKYS 314

Query: 153 DTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVK 212
           + + A   ++  Y +   N      I ++      D                   L G+ 
Sbjct: 315 EMIFATESEKRTYAVKPMNCPGHLQIFKQGLKSYRDLPYRMAEFGLVHRNEPSGSLHGL- 373

Query: 213 LLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNEL 272
           + +     D++  F     +  E    +             E+   +        G ++L
Sbjct: 374 MRVRSFTQDDAHIFCTEEQILDEVTSCIKMVYDTYKTFGFEEIEVKLSTRPEQRIGSDDL 433

Query: 273 VVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGG 332
              +E       ++N +K       G  Y     +        ++   +           
Sbjct: 434 WDKAEKSLAEALDANGLKYELQPGEGAFYGPKIEF---TLHDCLDRAWQCGTIQLDFSMP 490

Query: 333 RYDGLVSRFKGQNVPATGFSIGISRLIVALKS------LESSTNNIKEMGPVLITTMDHD 386
           + + L   + G++       +    ++ +L+        E +      + P  +  M+  
Sbjct: 491 QPERLDVSYVGEDNSRKVPVMIHRAILGSLERFIGILIEEYAGKLPTWLAPTQVQVMNIT 550

Query: 387 SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQ 446
            +     +   +ML   GIRA+  L  ++  G +++    +  P  ++ G  E   G + 
Sbjct: 551 DNQADYVRQVVEMLNDQGIRAKADL-RNEKIGFKIREHTLKRVPYLLVCGDQEMENGEIA 609

Query: 447 IK 448
           I+
Sbjct: 610 IR 611


>gi|242082049|ref|XP_002445793.1| hypothetical protein SORBIDRAFT_07g025840 [Sorghum bicolor]
 gi|241942143|gb|EES15288.1| hypothetical protein SORBIDRAFT_07g025840 [Sorghum bicolor]
          Length = 692

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 36/338 (10%), Positives = 89/338 (26%), Gaps = 40/338 (11%)

Query: 146 EMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIV-----LRAI 200
                +   L  +GI +       +    +            +     +         A 
Sbjct: 367 YFIGRVYLFLTCLGIDKGRLRFRQHLPNEMAHYAADCWDAEIECSYGWIECVGIADRSAY 426

Query: 201 DKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVK 260
           D        GV L+  E  +       +   +   + D+ ++F     +K + E  E + 
Sbjct: 427 DLKAHTEKSGVPLVAHEKFS--KPREVEKLVIVPSKKDLGLAFKG--NQKMVLEALEAMS 482

Query: 261 GTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQ 320
              A  +   EL    E   +       + I+  +V                  +     
Sbjct: 483 EKEAF-EMKAELETKGETNFRVCTLGKDVVITKKMVSISMEKKLEHQRVFTPSVIEPSFG 541

Query: 321 KPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNI-KEMGPVL 379
              +   +     Y       +                    + L               
Sbjct: 542 IGRIIYCLFEHSFYTRPSKSEE--------------------EQLNVFRFPPLVAPIKCT 581

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGT 437
           +  +  + +  +  ++  + L TAGI   +   ++ + G   +YA  D    P A+   +
Sbjct: 582 VFPLVKNQEFDAAAKVIAKALTTAGISHIID-TTAISIGR--RYARTDEIGVPFAVTVDS 638

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQIT 475
              +   + I++    +++  +I    S  +      +
Sbjct: 639 ---ATN-VTIRERDSKEQIRVDINEVASVVKQLTEGQS 672


>gi|167907142|ref|ZP_02494347.1| threonyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 670

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 4/113 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G      +   +   ++  +R   ++ G+  + +P +    SL +           +F+ 
Sbjct: 262 GAVFWHPRGWAVFQELIAYMRRRQQDAGYVEVNSPDVMDR-SLWEISGHWQNYRDHMFTT 320

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDT--IVFPCRTYRIGPVFRNEKHGPGR 124
           + +DG+ ++L+       A     +        P R    G V R E  G   
Sbjct: 321 ETEDGRALALKPMNCPGSALLY-RHGLKSYRDLPIRMGEFGKVHRYEPSGSLH 372



 Score = 41.4 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 9/72 (12%)

Query: 381 TTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGS---SKNFGNQ-LKYADRRNCPLAIIQG 436
             +       +  Q   ++LR AG+RAE  + +         Q L+       P  ++ G
Sbjct: 544 IVLSITEAHGAYAQDVARLLRGAGLRAEADIRNETIGYKIREQTLQR-----IPFLLVVG 598

Query: 437 TGERSRGMLQIK 448
             ER  G + I+
Sbjct: 599 AKERDAGAVAIR 610


>gi|29346339|ref|NP_809842.1| prolyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|81445136|sp|Q8A988|SYP_BACTN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|29338234|gb|AAO76036.1| prolyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 497

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 64/214 (29%), Gaps = 13/214 (6%)

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGG 331
           L V  E   K         + S   R          EA++      +       G     
Sbjct: 194 LNVYGEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQDGKALQSGTSHFLGQNFAK 253

Query: 332 GRYDGLVSRFKGQNVPATGFSIGISRLIVAL-----KSLESSTNNIKEMGPVLITTMDHD 386
                 V++               +RL+ AL                    V+I  +  +
Sbjct: 254 AFDVQFVNKENKMEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVIVPIYKN 313

Query: 387 SDSL----SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD--RRNCPLAIIQGTGER 440
            + L    +K +     L+  GI  +     +K  G   K+AD   +  P+ ++ G  + 
Sbjct: 314 DEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPG--FKFADYELKGVPVRLVMGGRDL 371

Query: 441 SRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
               +++      ++ +      E++ +  + +I
Sbjct: 372 ENNTMEVMRRDTLEKETVTCDGIETYVQKLLEEI 405


>gi|6321808|ref|NP_011884.1| hypothetical protein YHR020W [Saccharomyces cerevisiae S288c]
 gi|731640|sp|P38708|YHI0_YEAST RecName: Full=Putative prolyl-tRNA synthetase YHR020W; AltName:
           Full=Proline--tRNA ligase; Short=ProRS
 gi|500692|gb|AAB68873.1| Yhr020wp [Saccharomyces cerevisiae]
 gi|285809922|tpg|DAA06709.1| TPA: hypothetical protein YHR020W [Saccharomyces cerevisiae S288c]
          Length = 688

 Score = 42.9 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 18/106 (16%)

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +     L+  GIRA      +   G +    + +  P+ I  G  +  +  + +   
Sbjct: 497 ETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYELKGIPIRIELGPKDIEKNQVVV--- 553

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           R     +  +   EL + + +IL+E + ++
Sbjct: 554 ---------------VRRNDSKKYVVSFDELEARIPEILEEMQGDL 584


>gi|328869633|gb|EGG18010.1| glycyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 683

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 40/111 (36%), Gaps = 23/111 (20%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYA--DRRNCPLAIIQGT 437
           +  +          Q  T++L+  GI +++   S    G   +YA  D    P AI    
Sbjct: 575 VLPLTQSEALAPFVQQITRLLKEQGISSKVD-ESGVAIGR--RYARTDEIGIPFAITIDF 631

Query: 438 GERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKI 488
                  + +++                     + Q+ +P+ ++ +T+K++
Sbjct: 632 TTVEDQTVTLRERDT------------------MIQVRVPLQQVATTIKQL 664


>gi|255918003|pdb|3IAL|A Chain A, Giardia Lamblia Prolyl-Trna Synthetase In Complex With
           Prolyl-Adenylate
 gi|255918004|pdb|3IAL|B Chain B, Giardia Lamblia Prolyl-Trna Synthetase In Complex With
           Prolyl-Adenylate
          Length = 518

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 56/178 (31%), Gaps = 19/178 (10%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH-------- 385
           Y    +      +   G S  +    +++            + P+ +  +          
Sbjct: 256 YANKANESVHPYLTCAGISTRVLACALSIHGDSGGLVLPPLIAPIHVVIIPIGCGKKNNQ 315

Query: 386 --DSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
             D   L K       L++  G+R  +    SK+ G++L Y + +  PL I  G  + + 
Sbjct: 316 ESDQQVLGKVNEIADTLKSKLGLRVSIDDDFSKSMGDKLYYYELKGVPLRIEVGQRDLAN 375

Query: 443 GMLQI--KDLAKGKELSREIKNNESWREARVAQIT-----IPISELVSTVKKILQENK 493
           G   +  +D+ K ++    I                    +   EL    K  L+E  
Sbjct: 376 GQCIVVPRDVGKDQKRVIPITEVMKVSSHTTENHELVVKNVIKDEL-DAYKARLKEKA 432


>gi|151943962|gb|EDN62255.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|190405804|gb|EDV09071.1| hypothetical protein SCRG_04726 [Saccharomyces cerevisiae RM11-1a]
 gi|207344767|gb|EDZ71797.1| YHR020Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259147048|emb|CAY80303.1| EC1118_1H21_0848p [Saccharomyces cerevisiae EC1118]
 gi|323308880|gb|EGA62116.1| YHR020W-like protein [Saccharomyces cerevisiae FostersO]
 gi|323348347|gb|EGA82595.1| YHR020W-like protein [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354780|gb|EGA86614.1| YHR020W-like protein [Saccharomyces cerevisiae VL3]
          Length = 688

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 18/106 (16%)

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +     L+  GIRA      +   G +    + +  P+ I  G  +  +  + +   
Sbjct: 497 ETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYELKGIPIRIELGPKDIEKNQVVV--- 553

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           R     +  +   EL + + +IL+E + ++
Sbjct: 554 ---------------VRRNDSKKYVVSFDELEARIPEILEEMQGDL 584


>gi|312863998|ref|ZP_07724234.1| proline--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322517545|ref|ZP_08070414.1| proline--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311100411|gb|EFQ58618.1| proline--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322123805|gb|EFX95379.1| proline--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 620

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 5/139 (3%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G         R   +    +R  +E  G   +  P L  +D L +     +   + ++ L
Sbjct: 38  GIYAYMPLANRAIEKFKTIMREEFEKIGAVEMLAPALLTAD-LWRESGRYETYGEDLYKL 96

Query: 74  QDDDGQWISLRY--DLT-APLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQ 130
           ++ D     L    + T   L R   +++  +       +       ++   G  R    
Sbjct: 97  KNRDKSDFILGPTHEETFTALVRDAVKSYKQLPLNLYQIQ-SKYRDEKRPRNGLLRTREF 155

Query: 131 CDVDNVGSSAETADAEMCM 149
              D         D ++  
Sbjct: 156 IMKDAYSFHQNYEDLDVTY 174



 Score = 39.8 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 2/108 (1%)

Query: 367 SSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADR 426
           +    +      LIT    D ++ +        L   G    +   + +  G++   +D 
Sbjct: 513 NFPKELAPYDVHLITVNTKDEEANALTDRLESALAAEGYDVLIDDRNER-VGSKFSDSDL 571

Query: 427 RNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQI 474
              P+ +  G    S G++++K  A G  +     N          + 
Sbjct: 572 IGLPIRVTVGKK-ASEGVVEVKIKATGDTIEVNADNLIETLAILTTEQ 618


>gi|307069528|ref|YP_003878005.1| putative threonyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
 gi|306482788|gb|ADM89659.1| putative threonyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
          Length = 467

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 24  RIRNRILDSIRN-IYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82
            I   I   IRN IY  Y +  I+TP++   D   K     +   K +F L+  + +  +
Sbjct: 102 IIWKNINKYIRNNIYIKYNYKEIKTPII-LRDYFWKKTKHWNYYKKNMFLLKTKNKK-YA 159

Query: 83  LRYDLTAP 90
           L+      
Sbjct: 160 LKPMNCPG 167


>gi|256269239|gb|EEU04564.1| YHR020W-like protein [Saccharomyces cerevisiae JAY291]
          Length = 688

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 18/106 (16%)

Query: 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL 450
              +     L+  GIRA      +   G +    + +  P+ I  G  +  +  + +   
Sbjct: 497 ETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYELKGIPIRIELGPKDIEKNQVVV--- 553

Query: 451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENKEEI 496
                           R     +  +   EL + + +IL+E + ++
Sbjct: 554 ---------------VRRNDSKKYVVSFDELEARIPEILEEMQGDL 584


>gi|159110155|ref|XP_001705339.1| Prolyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433422|gb|EDO77665.1| Prolyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 542

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 56/178 (31%), Gaps = 19/178 (10%)

Query: 334 YDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDH-------- 385
           Y    +      +   G S  +    +++            + P+ +  +          
Sbjct: 280 YANKANESVHPYLTCAGISTRVLACALSIHGDSGGLVLPPLIAPIHVVIIPIGCGKKNNQ 339

Query: 386 --DSDSLSKYQMYTQMLRTA-GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSR 442
             D   L K       L++  G+R  +    SK+ G++L Y + +  PL I  G  + + 
Sbjct: 340 ESDQQVLGKVNEIADTLKSKLGLRVSIDDDFSKSMGDKLYYYELKGVPLRIEVGQRDLAN 399

Query: 443 GMLQI--KDLAKGKELSREIKNNESWREARVAQIT-----IPISELVSTVKKILQENK 493
           G   +  +D+ K ++    I                    +   EL    K  L+E  
Sbjct: 400 GQCIVVPRDVGKDQKRVIPITEVMKVSSHTTENHELVVKNVIKDEL-DAYKARLKEKA 456


>gi|332828261|gb|EGK00973.1| glycyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 511

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/277 (9%), Positives = 67/277 (24%), Gaps = 29/277 (10%)

Query: 229 GANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNR 288
           G    +E +     F   + E+   + +      +     + E  +        G +  R
Sbjct: 244 GKAFRNEIVARQFIFRMREFEQMEMQFFVRPGEELEWFAKWKETRMKWHKALGYGDHKYR 303

Query: 289 IKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG----LVSRFKGQ 344
                 +       T   +E   GF  +        F  +    +Y G           +
Sbjct: 304 FHDHDKLAHYANAATDIEFEMPFGFKEVEGIHSRTDF-DLSSHEQYSGKKLQYFDPELNK 362

Query: 345 NVPATGFSIGISRLIVALKSLESSTNNIK----------------EMGPVLITTMDHDSD 388
           +         I    + L ++ ++    +                    + +  +     
Sbjct: 363 SYTPYVIETSIGVDRMFLSTMSAAYCEEELEGGESRVVLKLPAALAPIKLAVLPLIKKDG 422

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
              K Q     L     + +       + G + +  D    P  +           + I+
Sbjct: 423 LPEKAQEIIDNL-KFDFKCQ--YDEKDSIGKRYRRQDAIGTPYCVTVDHQSLEDNTVTIR 479

Query: 449 DLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                ++    I         +     + +  L+ T+
Sbjct: 480 YRDTMEQERVAIDRLADIIADK-----VSMKNLLKTI 511


>gi|330810593|ref|YP_004355055.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378701|gb|AEA70051.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 640

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/142 (7%), Positives = 34/142 (23%), Gaps = 2/142 (1%)

Query: 14  GFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSL 73
           G          +   +   +R +    G+  I+TP +       K           +F+ 
Sbjct: 261 GMVFWHPNGWTLYQVLEQYMRQVQRENGYLEIKTPQVVDRSLWEKS-GHWANYADNMFTT 319

Query: 74  QDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDV 133
           Q ++ +  +++        +   +   +                 +              
Sbjct: 320 QSEN-RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRVRAF 378

Query: 134 DNVGSSAETADAEMCMMMADTL 155
               +     + +M    A  +
Sbjct: 379 TQDDAHIFCTEEQMQAESAAFI 400



 Score = 37.5 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 38/360 (10%), Positives = 93/360 (25%), Gaps = 18/360 (5%)

Query: 94  YVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMAD 153
            V  + +         +     + E  G    +     D      S   A+        +
Sbjct: 262 MVFWHPNGWTLYQVLEQYMRQVQREN-GYLEIKTPQVVDRSLWEKSGHWANY-----ADN 315

Query: 154 TLEAVGIKRNDYHIGINNRKILDGILEKIGLHGD--DKLNERLIVLRAIDKLDKFGLQGV 211
                   R+     +N    +    + +  + +   +L E     R        G+  V
Sbjct: 316 MFTTQSENRDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALHGIMRV 375

Query: 212 KLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNE 271
           +        D++  F     + +E    +   + +  +    E+   +        G +E
Sbjct: 376 RA----FTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDFGFTEVEMKLSTRPEKRVGSDE 431

Query: 272 LVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQK---PVVFGSV 328
           L   +E    +  +S  +        G  Y     +        + +             
Sbjct: 432 LWDRAEAALAAALDSAGLAYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIR 491

Query: 329 GGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSD 388
            G        SR     +           + + ++  E +              M+    
Sbjct: 492 LGAEYVSEDNSRKHPVMLHRAILGSFERFVGILIEHYEGAFPAWLAPTQA--VIMNITDK 549

Query: 389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIK 448
                    + L  +G RA+  L  ++  G +++       P  ++ G  E     + ++
Sbjct: 550 QADFAAEVEKTLNQSGFRAKSDL-RNEKIGFKIREHTLLKVPFLLVIGDREVEMQTVAVR 608


>gi|183982102|ref|YP_001850393.1| threonyl-tRNA synthetase ThrS [Mycobacterium marinum M]
 gi|238690929|sp|B2HM74|SYT_MYCMM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|183175428|gb|ACC40538.1| threonyl-tRNA synthetase ThrS [Mycobacterium marinum M]
          Length = 691

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 38/114 (33%), Gaps = 9/114 (7%)

Query: 374 EMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAI 433
            + PV    +    + ++  +     L++ G+R E+     +     + + + +  P  +
Sbjct: 576 WLAPVQAVGIPVADEHVAYLEQVAAQLKSHGVRVEVDTSDDRMAKKIVHHTN-QKVPFML 634

Query: 434 IQGTGERSRGMLQIKDLAKGKEL-----SREIKNNESWREARVAQITIPISELV 482
           + G  +     +  +      ++        +     W   R      P +ELV
Sbjct: 635 LAGDRDVQADAVSFR-FGDRTQINGVPREAAVAAIVDWISRRENAT--PTAELV 685


>gi|90407011|ref|ZP_01215201.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311882|gb|EAS39977.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 635

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/380 (10%), Positives = 94/380 (24%), Gaps = 32/380 (8%)

Query: 116 RNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKIL 175
           +  +     +          +  S             +        R+     +N    +
Sbjct: 278 KYIREQTEEYGYQEVKAPQILDRSLWEKSGHWAKYKDNMFCTCSENRDYAIKPMNCPGHV 337

Query: 176 DGILEKIGLHGDDKLNERLI--VLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLT 233
               + +  + D  L         R        GL  V+        D++  F   A + 
Sbjct: 338 QIFNQGLKSYRDLPLRMSEFGSCHRNEPSGSLHGLMRVRA----FTQDDAHIFCTEAQIL 393

Query: 234 SEQIDIMVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISS 293
            E    +              +   +        G +     +E         N ++ S 
Sbjct: 394 DEVSSCIKMVFECYKTFGFENIDVKLSTRPEQRVGDDATWDKAEAALADALTKNDVEFSW 453

Query: 294 TIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG-SVGGGGRYDGLVSRFKGQNVPATGFS 352
               G  Y     +        +    +           GR D        +        
Sbjct: 454 LPGEGAFYGPKIEF---TLHDCLGRAWQCGTIQLDFSMPGRLDATFVGEDNERHTPVMIH 510

Query: 353 IGISRLIVA---LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEM 409
             I   +     + + E +      + P  +  M+               L+ +GIR   
Sbjct: 511 RAILGSLERWIGILTEEYAGIFPTWLSPQQVVVMNITDKQSEYVAEVVTKLKKSGIRVIS 570

Query: 410 FLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREA 469
            L  ++  G +++    +  P  ++ G  E     L I+        +R+  +   +   
Sbjct: 571 DL-RNEKIGFKIREHTLKRVPYLLVVGDKEVEARELSIR--------TRKGDDLGKF--- 618

Query: 470 RVAQITIPISELVSTVKKIL 489
                   I + ++ +K+ +
Sbjct: 619 -------KIDDFITYIKEEI 631



 Score = 40.6 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 43/152 (28%), Gaps = 3/152 (1%)

Query: 7   LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRP 66
           ++ E P G          I   +   IR   E YG+  ++ P +    SL +      + 
Sbjct: 255 MQDEAP-GMVFWHANGWTIYRELEKYIREQTEEYGYQEVKAPQI-LDRSLWEKSGHWAKY 312

Query: 67  NKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFR 126
              +F    ++ +  +++        +   +   +                 +       
Sbjct: 313 KDNMFCTCSEN-RDYAIKPMNCPGHVQIFNQGLKSYRDLPLRMSEFGSCHRNEPSGSLHG 371

Query: 127 QFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
                      +     +A++   ++  ++ V
Sbjct: 372 LMRVRAFTQDDAHIFCTEAQILDEVSSCIKMV 403


>gi|293400671|ref|ZP_06644816.1| glycine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305697|gb|EFE46941.1| glycine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 460

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 52/224 (23%), Gaps = 18/224 (8%)

Query: 249 EKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYE 308
            + +       +      KG  ++          G        +   ++  +  +    E
Sbjct: 254 PEHLRFRDHTPEELAFYSKGTCDIEYNFHSQIGWGELWGIADRTDYDLKQHQEASKKSLE 313

Query: 309 AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS 368
                P  NEK  P       G  R                 F                 
Sbjct: 314 --YLDPTTNEKYLPYCVEPAVGVERL-------------MLAFLCDAYDEEELENDTRIV 358

Query: 369 TNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRN 428
            +    + P+             K     QML      A      + + G + +  D   
Sbjct: 359 MHLHPFLAPIKACITPLSKKLSEKGMEVFQML---APVANCDYDDAGSIGKRYRRNDAIG 415

Query: 429 CPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVA 472
            P  I           + +++    K+    + +  S+ E R+ 
Sbjct: 416 TPFCITVDFETEQDNCVTVRERDTMKQERVNLNDLVSYIEERIK 459


>gi|255548247|ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis]
 gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase, putative [Ricinus communis]
          Length = 501

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 40/138 (28%), Gaps = 22/138 (15%)

Query: 363 KSLESSTNNIKEMGPVLITTMDHDSD----SLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
                          V++  + +                  L   GIRAE     + + G
Sbjct: 291 DDKGLVLPPKVASVQVIVIPVPYKDADTQGIFDACTETVDALCKVGIRAESDFRDNYSPG 350

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
            +  + + +  PL I  G  + +   ++                  + R     +  I  
Sbjct: 351 WKYSHWEVKGVPLRIEIGPKDLANNQVR------------------TVRRDNATKKDISR 392

Query: 479 SELVSTVKKILQENKEEI 496
             LV  VK+IL   ++ +
Sbjct: 393 VNLVEQVKEILDAIQQSL 410


>gi|320164647|gb|EFW41546.1| glutamyl-prolyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 1526

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 387  SDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGM-L 445
            +  ++  +     LR  GIR +     +   G +  + + R  PL I  G  +      +
Sbjct: 1336 AALMAYGKQVEDALRAGGIRVKFDDRDNYTPGYKFNHWELRGVPLRIEVGPRDMKNKQIV 1395

Query: 446  QIKDLAKGKELSREIKNN 463
             ++    G++ S  + N 
Sbjct: 1396 AVR-RDTGEKTSHSVDNI 1412


>gi|183602387|ref|ZP_02963753.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683298|ref|YP_002469681.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241191259|ref|YP_002968653.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196665|ref|YP_002970220.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183218306|gb|EDT88951.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219620948|gb|ACL29105.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249651|gb|ACS46591.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240251219|gb|ACS48158.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295794252|gb|ADG33787.1| glycyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 491

 Score = 42.5 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 33/114 (28%), Gaps = 20/114 (17%)

Query: 380 ITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGE 439
           +  +    +  S  Q   Q LR       +    S   G + +  D    PL I      
Sbjct: 370 VLPLSKKPELQSVAQDLAQDLRLNDW--MIDYDESGAIGRRYRRQDEIGTPLCITVDFDT 427

Query: 440 RSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQENK 493
                + I++                     + Q  + ++++   V K + + +
Sbjct: 428 LDDQAVTIRERDT------------------MQQERVALTQVADYVAKRINDKR 463


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.120    0.317 

Lambda     K      H
   0.267   0.0367    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,506,644,589
Number of Sequences: 14124377
Number of extensions: 213316168
Number of successful extensions: 693605
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 8139
Number of HSP's successfully gapped in prelim test: 3221
Number of HSP's that attempted gapping in prelim test: 663724
Number of HSP's gapped (non-prelim): 18055
length of query: 496
length of database: 4,842,793,630
effective HSP length: 143
effective length of query: 353
effective length of database: 2,823,007,719
effective search space: 996521724807
effective search space used: 996521724807
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 83 (36.7 bits)